CDA09_16960 492abbea72271cc7aa1941a2ae0e4354 390 SUPERFAMILY SSF56645 1 245 1.57E-62 T 01-11-2018 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain superfamily GO:0016627|GO:0055114 CDA09_16960 492abbea72271cc7aa1941a2ae0e4354 390 Pfam PF02770 Acyl-CoA dehydrogenase, middle domain 128 203 1.4E-16 T 01-11-2018 IPR006091 Acyl-CoA oxidase/dehydrogenase, central domain GO:0016627|GO:0055114 CDA09_16960 492abbea72271cc7aa1941a2ae0e4354 390 Gene3D G3DSA:2.40.110.10 127 239 7.4E-31 T 01-11-2018 CDA09_16960 492abbea72271cc7aa1941a2ae0e4354 390 Pfam PF00441 Acyl-CoA dehydrogenase, C-terminal domain 234 382 1.1E-42 T 01-11-2018 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal GO:0016627|GO:0055114 CDA09_16960 492abbea72271cc7aa1941a2ae0e4354 390 SUPERFAMILY SSF47203 232 385 6.6E-51 T 01-11-2018 IPR036250 Acyl-CoA dehydrogenase-like, C-terminal GO:0016627|GO:0055114 CDA09_16960 492abbea72271cc7aa1941a2ae0e4354 390 Gene3D G3DSA:1.20.140.10 240 385 2.3E-45 T 01-11-2018 CDA09_16960 492abbea72271cc7aa1941a2ae0e4354 390 Gene3D G3DSA:1.10.540.10 1 126 6.5E-32 T 01-11-2018 IPR037069 Acyl-CoA dehydrogenase/oxidase, N-terminal domain superfamily GO:0016627|GO:0050660|GO:0055114 CDA09_16960 492abbea72271cc7aa1941a2ae0e4354 390 ProSitePatterns PS00073 Acyl-CoA dehydrogenases signature 2. 341 360 - T 01-11-2018 IPR006089 Acyl-CoA dehydrogenase, conserved site GO:0003995|GO:0055114 CDA09_16960 492abbea72271cc7aa1941a2ae0e4354 390 Pfam PF02771 Acyl-CoA dehydrogenase, N-terminal domain 6 124 6.7E-18 T 01-11-2018 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal GO:0016627|GO:0050660|GO:0055114 CDA09_05620 de3c14ee56bac943dda783066c246bd1 143 Pfam PF13412 Winged helix-turn-helix DNA-binding 1 47 7.7E-13 T 01-11-2018 CDA09_05620 de3c14ee56bac943dda783066c246bd1 143 SMART SM00344 1 107 5.0E-15 T 01-11-2018 IPR019888 Transcription regulator AsnC-type GO:0003700|GO:0005622|GO:0006355|GO:0043565 CDA09_05620 de3c14ee56bac943dda783066c246bd1 143 SUPERFAMILY SSF54909 63 139 8.58E-12 T 01-11-2018 IPR011008 Dimeric alpha-beta barrel CDA09_05620 de3c14ee56bac943dda783066c246bd1 143 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 1 17 1.2E-9 T 01-11-2018 IPR000485 AsnC-type HTH domain GO:0043565 CDA09_05620 de3c14ee56bac943dda783066c246bd1 143 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 17 28 1.2E-9 T 01-11-2018 IPR000485 AsnC-type HTH domain GO:0043565 CDA09_05620 de3c14ee56bac943dda783066c246bd1 143 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 28 47 1.2E-9 T 01-11-2018 IPR000485 AsnC-type HTH domain GO:0043565 CDA09_05620 de3c14ee56bac943dda783066c246bd1 143 Gene3D G3DSA:3.30.70.920 54 142 1.3E-13 T 01-11-2018 CDA09_05620 de3c14ee56bac943dda783066c246bd1 143 Gene3D G3DSA:1.10.10.10 1 52 1.2E-17 T 01-11-2018 IPR036388 Winged helix-like DNA-binding domain superfamily CDA09_05620 de3c14ee56bac943dda783066c246bd1 143 SUPERFAMILY SSF46785 1 56 3.08E-13 T 01-11-2018 IPR036390 Winged helix DNA-binding domain superfamily CDA09_05620 de3c14ee56bac943dda783066c246bd1 143 Pfam PF01037 Lrp/AsnC ligand binding domain 71 135 8.8E-11 T 01-11-2018 IPR019887 Transcription regulator AsnC/Lrp, ligand binding domain CDA09_02595 c9bd878a8bc688cdc14994682d3aff41 315 Gene3D G3DSA:3.90.25.10 167 295 4.6E-118 T 01-11-2018 CDA09_02595 c9bd878a8bc688cdc14994682d3aff41 315 TIGRFAM TIGR02197 heptose_epim: ADP-glyceromanno-heptose 6-epimerase 3 313 2.7E-128 T 01-11-2018 IPR011912 ADP-L-glycero-D-manno-heptose-6-epimerase GO:0005975|GO:0008712|GO:0050661 KEGG: 00540+5.1.3.20 CDA09_02595 c9bd878a8bc688cdc14994682d3aff41 315 Hamap MF_01601 ADP-L-glycero-D-manno-heptose-6-epimerase [hldD]. 1 314 49.852 T 01-11-2018 IPR011912 ADP-L-glycero-D-manno-heptose-6-epimerase GO:0005975|GO:0008712|GO:0050661 KEGG: 00540+5.1.3.20 CDA09_02595 c9bd878a8bc688cdc14994682d3aff41 315 Gene3D G3DSA:3.40.50.720 3 307 4.6E-118 T 01-11-2018 CDA09_02595 c9bd878a8bc688cdc14994682d3aff41 315 SUPERFAMILY SSF51735 3 311 8.7E-57 T 01-11-2018 IPR036291 NAD(P)-binding domain superfamily CDA09_02595 c9bd878a8bc688cdc14994682d3aff41 315 Pfam PF01370 NAD dependent epimerase/dehydratase family 3 241 1.3E-40 T 01-11-2018 IPR001509 NAD-dependent epimerase/dehydratase GO:0003824|GO:0050662 CDA09_21610 6d358b7875f7ea2b897f3731757705d2 603 Gene3D G3DSA:2.40.10.200 490 591 2.8E-26 T 01-11-2018 CDA09_21610 6d358b7875f7ea2b897f3731757705d2 603 SUPERFAMILY SSF46785 469 595 2.99E-44 T 01-11-2018 IPR036390 Winged helix DNA-binding domain superfamily CDA09_21610 6d358b7875f7ea2b897f3731757705d2 603 TIGRFAM TIGR03760 ICE_TraI_Pfluor: integrating conjugative element relaxase, PFGI-1 class 27 243 3.5E-89 T 01-11-2018 IPR022391 Integrating conjugative element relaxase, PFGI-1 class CDA09_21610 6d358b7875f7ea2b897f3731757705d2 603 Pfam PF07515 Putative conjugal transfer nickase/helicase TraI C-term 473 595 1.0E-48 T 01-11-2018 IPR011093 Putative conjugal transfer nickase/helicase TraI, C-terminal CDA09_21610 6d358b7875f7ea2b897f3731757705d2 603 Gene3D G3DSA:1.10.10.10 474 544 2.8E-26 T 01-11-2018 IPR036388 Winged helix-like DNA-binding domain superfamily CDA09_21610 6d358b7875f7ea2b897f3731757705d2 603 Gene3D G3DSA:1.10.3210.40 28 251 1.6E-37 T 01-11-2018 CDA09_21610 6d358b7875f7ea2b897f3731757705d2 603 Pfam PF07514 Putative helicase 27 340 1.8E-126 T 01-11-2018 IPR011119 Uncharacterised domain, helicase/relaxase, putative CDA09_15490 3fb0a8ee540ddb6b618bf5c7846cb556 99 Pfam PF00037 4Fe-4S binding domain 72 93 1.1E-6 T 01-11-2018 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain CDA09_15490 3fb0a8ee540ddb6b618bf5c7846cb556 99 SUPERFAMILY SSF54862 21 97 2.27E-17 T 01-11-2018 CDA09_15490 3fb0a8ee540ddb6b618bf5c7846cb556 99 TIGRFAM TIGR02179 PorD_KorD: 2-oxoacid:acceptor oxidoreductase, delta subunit, pyruvate/2-ketoisovalerate family 33 97 4.4E-25 T 01-11-2018 IPR011898 2-oxoacid:acceptor oxidoreductase, delta subunit, pyruvate/2-ketoisovalerate GO:0016625|GO:0051539 CDA09_15490 3fb0a8ee540ddb6b618bf5c7846cb556 99 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 77 88 - T 01-11-2018 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site CDA09_15490 3fb0a8ee540ddb6b618bf5c7846cb556 99 Gene3D G3DSA:3.30.70.20 41 99 1.4E-11 T 01-11-2018 CDA09_15550 8173d5b32b8af2aa89cdda0c5865597e 153 PRINTS PR00598 Bacterial regulatory protein MarR family signature 79 94 5.3E-16 T 01-11-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 CDA09_15550 8173d5b32b8af2aa89cdda0c5865597e 153 PRINTS PR00598 Bacterial regulatory protein MarR family signature 62 78 5.3E-16 T 01-11-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 CDA09_15550 8173d5b32b8af2aa89cdda0c5865597e 153 PRINTS PR00598 Bacterial regulatory protein MarR family signature 128 148 5.3E-16 T 01-11-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 CDA09_15550 8173d5b32b8af2aa89cdda0c5865597e 153 PRINTS PR00598 Bacterial regulatory protein MarR family signature 98 114 5.3E-16 T 01-11-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 CDA09_15550 8173d5b32b8af2aa89cdda0c5865597e 153 SMART SM00347 38 138 7.0E-22 T 01-11-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 CDA09_15550 8173d5b32b8af2aa89cdda0c5865597e 153 Pfam PF01047 MarR family 46 102 8.9E-15 T 01-11-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 CDA09_15550 8173d5b32b8af2aa89cdda0c5865597e 153 SUPERFAMILY SSF46785 8 148 1.55E-33 T 01-11-2018 IPR036390 Winged helix DNA-binding domain superfamily CDA09_15550 8173d5b32b8af2aa89cdda0c5865597e 153 Gene3D G3DSA:1.10.10.10 4 150 1.3E-35 T 01-11-2018 IPR036388 Winged helix-like DNA-binding domain superfamily CDA09_08715 74d84b9ae62d5d8cf6fbc784658567b6 545 Pfam PF00342 Phosphoglucose isomerase 49 538 1.5E-217 T 01-11-2018 IPR001672 Phosphoglucose isomerase (PGI) GO:0004347|GO:0006094|GO:0006096 KEGG: 00010+5.3.1.9|KEGG: 00030+5.3.1.9|KEGG: 00500+5.3.1.9|KEGG: 00520+5.3.1.9|MetaCyc: PWY-3801|MetaCyc: PWY-5054|MetaCyc: PWY-5384|MetaCyc: PWY-5514|MetaCyc: PWY-5659|MetaCyc: PWY-6142|MetaCyc: PWY-621|MetaCyc: PWY-622|MetaCyc: PWY-6981|MetaCyc: PWY-6992|MetaCyc: PWY-7238|MetaCyc: PWY-7347|MetaCyc: PWY-7385|Reactome: R-HSA-5628897|Reactome: R-HSA-6798695|Reactome: R-HSA-70171|Reactome: R-HSA-70263 CDA09_08715 74d84b9ae62d5d8cf6fbc784658567b6 545 ProSitePatterns PS00174 Phosphoglucose isomerase signature 2. 495 512 - T 01-11-2018 IPR018189 Phosphoglucose isomerase, conserved site GO:0004347|GO:0006094|GO:0006096 KEGG: 00010+5.3.1.9|KEGG: 00030+5.3.1.9|KEGG: 00500+5.3.1.9|KEGG: 00520+5.3.1.9|MetaCyc: PWY-3801|MetaCyc: PWY-5054|MetaCyc: PWY-5384|MetaCyc: PWY-5514|MetaCyc: PWY-5659|MetaCyc: PWY-6142|MetaCyc: PWY-621|MetaCyc: PWY-622|MetaCyc: PWY-6981|MetaCyc: PWY-6992|MetaCyc: PWY-7238|MetaCyc: PWY-7347|MetaCyc: PWY-7385|Reactome: R-HSA-5628897|Reactome: R-HSA-6798695|Reactome: R-HSA-70171|Reactome: R-HSA-70263 CDA09_08715 74d84b9ae62d5d8cf6fbc784658567b6 545 PRINTS PR00662 Glucose-6-phosphate isomerase signature 495 508 1.9E-54 T 01-11-2018 IPR001672 Phosphoglucose isomerase (PGI) GO:0004347|GO:0006094|GO:0006096 KEGG: 00010+5.3.1.9|KEGG: 00030+5.3.1.9|KEGG: 00500+5.3.1.9|KEGG: 00520+5.3.1.9|MetaCyc: PWY-3801|MetaCyc: PWY-5054|MetaCyc: PWY-5384|MetaCyc: PWY-5514|MetaCyc: PWY-5659|MetaCyc: PWY-6142|MetaCyc: PWY-621|MetaCyc: PWY-622|MetaCyc: PWY-6981|MetaCyc: PWY-6992|MetaCyc: PWY-7238|MetaCyc: PWY-7347|MetaCyc: PWY-7385|Reactome: R-HSA-5628897|Reactome: R-HSA-6798695|Reactome: R-HSA-70171|Reactome: R-HSA-70263 CDA09_08715 74d84b9ae62d5d8cf6fbc784658567b6 545 PRINTS PR00662 Glucose-6-phosphate isomerase signature 336 357 1.9E-54 T 01-11-2018 IPR001672 Phosphoglucose isomerase (PGI) GO:0004347|GO:0006094|GO:0006096 KEGG: 00010+5.3.1.9|KEGG: 00030+5.3.1.9|KEGG: 00500+5.3.1.9|KEGG: 00520+5.3.1.9|MetaCyc: PWY-3801|MetaCyc: PWY-5054|MetaCyc: PWY-5384|MetaCyc: PWY-5514|MetaCyc: PWY-5659|MetaCyc: PWY-6142|MetaCyc: PWY-621|MetaCyc: PWY-622|MetaCyc: PWY-6981|MetaCyc: PWY-6992|MetaCyc: PWY-7238|MetaCyc: PWY-7347|MetaCyc: PWY-7385|Reactome: R-HSA-5628897|Reactome: R-HSA-6798695|Reactome: R-HSA-70171|Reactome: R-HSA-70263 CDA09_08715 74d84b9ae62d5d8cf6fbc784658567b6 545 PRINTS PR00662 Glucose-6-phosphate isomerase signature 463 481 1.9E-54 T 01-11-2018 IPR001672 Phosphoglucose isomerase (PGI) GO:0004347|GO:0006094|GO:0006096 KEGG: 00010+5.3.1.9|KEGG: 00030+5.3.1.9|KEGG: 00500+5.3.1.9|KEGG: 00520+5.3.1.9|MetaCyc: PWY-3801|MetaCyc: PWY-5054|MetaCyc: PWY-5384|MetaCyc: PWY-5514|MetaCyc: PWY-5659|MetaCyc: PWY-6142|MetaCyc: PWY-621|MetaCyc: PWY-622|MetaCyc: PWY-6981|MetaCyc: PWY-6992|MetaCyc: PWY-7238|MetaCyc: PWY-7347|MetaCyc: PWY-7385|Reactome: R-HSA-5628897|Reactome: R-HSA-6798695|Reactome: R-HSA-70171|Reactome: R-HSA-70263 CDA09_08715 74d84b9ae62d5d8cf6fbc784658567b6 545 PRINTS PR00662 Glucose-6-phosphate isomerase signature 147 166 1.9E-54 T 01-11-2018 IPR001672 Phosphoglucose isomerase (PGI) GO:0004347|GO:0006094|GO:0006096 KEGG: 00010+5.3.1.9|KEGG: 00030+5.3.1.9|KEGG: 00500+5.3.1.9|KEGG: 00520+5.3.1.9|MetaCyc: PWY-3801|MetaCyc: PWY-5054|MetaCyc: PWY-5384|MetaCyc: PWY-5514|MetaCyc: PWY-5659|MetaCyc: PWY-6142|MetaCyc: PWY-621|MetaCyc: PWY-622|MetaCyc: PWY-6981|MetaCyc: PWY-6992|MetaCyc: PWY-7238|MetaCyc: PWY-7347|MetaCyc: PWY-7385|Reactome: R-HSA-5628897|Reactome: R-HSA-6798695|Reactome: R-HSA-70171|Reactome: R-HSA-70263 CDA09_08715 74d84b9ae62d5d8cf6fbc784658567b6 545 PRINTS PR00662 Glucose-6-phosphate isomerase signature 481 495 1.9E-54 T 01-11-2018 IPR001672 Phosphoglucose isomerase (PGI) GO:0004347|GO:0006094|GO:0006096 KEGG: 00010+5.3.1.9|KEGG: 00030+5.3.1.9|KEGG: 00500+5.3.1.9|KEGG: 00520+5.3.1.9|MetaCyc: PWY-3801|MetaCyc: PWY-5054|MetaCyc: PWY-5384|MetaCyc: PWY-5514|MetaCyc: PWY-5659|MetaCyc: PWY-6142|MetaCyc: PWY-621|MetaCyc: PWY-622|MetaCyc: PWY-6981|MetaCyc: PWY-6992|MetaCyc: PWY-7238|MetaCyc: PWY-7347|MetaCyc: PWY-7385|Reactome: R-HSA-5628897|Reactome: R-HSA-6798695|Reactome: R-HSA-70171|Reactome: R-HSA-70263 CDA09_08715 74d84b9ae62d5d8cf6fbc784658567b6 545 PRINTS PR00662 Glucose-6-phosphate isomerase signature 259 277 1.9E-54 T 01-11-2018 IPR001672 Phosphoglucose isomerase (PGI) GO:0004347|GO:0006094|GO:0006096 KEGG: 00010+5.3.1.9|KEGG: 00030+5.3.1.9|KEGG: 00500+5.3.1.9|KEGG: 00520+5.3.1.9|MetaCyc: PWY-3801|MetaCyc: PWY-5054|MetaCyc: PWY-5384|MetaCyc: PWY-5514|MetaCyc: PWY-5659|MetaCyc: PWY-6142|MetaCyc: PWY-621|MetaCyc: PWY-622|MetaCyc: PWY-6981|MetaCyc: PWY-6992|MetaCyc: PWY-7238|MetaCyc: PWY-7347|MetaCyc: PWY-7385|Reactome: R-HSA-5628897|Reactome: R-HSA-6798695|Reactome: R-HSA-70171|Reactome: R-HSA-70263 CDA09_08715 74d84b9ae62d5d8cf6fbc784658567b6 545 SUPERFAMILY SSF53697 3 543 1.97E-216 T 01-11-2018 CDA09_08715 74d84b9ae62d5d8cf6fbc784658567b6 545 Gene3D G3DSA:3.40.50.10490 10 504 1.5E-227 T 01-11-2018 CDA09_08715 74d84b9ae62d5d8cf6fbc784658567b6 545 ProSitePatterns PS00765 Phosphoglucose isomerase signature 1. 263 276 - T 01-11-2018 IPR018189 Phosphoglucose isomerase, conserved site GO:0004347|GO:0006094|GO:0006096 KEGG: 00010+5.3.1.9|KEGG: 00030+5.3.1.9|KEGG: 00500+5.3.1.9|KEGG: 00520+5.3.1.9|MetaCyc: PWY-3801|MetaCyc: PWY-5054|MetaCyc: PWY-5384|MetaCyc: PWY-5514|MetaCyc: PWY-5659|MetaCyc: PWY-6142|MetaCyc: PWY-621|MetaCyc: PWY-622|MetaCyc: PWY-6981|MetaCyc: PWY-6992|MetaCyc: PWY-7238|MetaCyc: PWY-7347|MetaCyc: PWY-7385|Reactome: R-HSA-5628897|Reactome: R-HSA-6798695|Reactome: R-HSA-70171|Reactome: R-HSA-70263 CDA09_08715 74d84b9ae62d5d8cf6fbc784658567b6 545 Hamap MF_00473 Glucose-6-phosphate isomerase [pgi]. 43 522 41.355 T 01-11-2018 IPR001672 Phosphoglucose isomerase (PGI) GO:0004347|GO:0006094|GO:0006096 KEGG: 00010+5.3.1.9|KEGG: 00030+5.3.1.9|KEGG: 00500+5.3.1.9|KEGG: 00520+5.3.1.9|MetaCyc: PWY-3801|MetaCyc: PWY-5054|MetaCyc: PWY-5384|MetaCyc: PWY-5514|MetaCyc: PWY-5659|MetaCyc: PWY-6142|MetaCyc: PWY-621|MetaCyc: PWY-622|MetaCyc: PWY-6981|MetaCyc: PWY-6992|MetaCyc: PWY-7238|MetaCyc: PWY-7347|MetaCyc: PWY-7385|Reactome: R-HSA-5628897|Reactome: R-HSA-6798695|Reactome: R-HSA-70171|Reactome: R-HSA-70263 CDA09_08715 74d84b9ae62d5d8cf6fbc784658567b6 545 Gene3D G3DSA:1.10.1390.10 505 545 9.7E-16 T 01-11-2018 IPR023096 Phosphoglucose isomerase, C-terminal GO:0004347|GO:0006096 KEGG: 00010+5.3.1.9|KEGG: 00030+5.3.1.9|KEGG: 00500+5.3.1.9|KEGG: 00520+5.3.1.9|MetaCyc: PWY-3801|MetaCyc: PWY-5054|MetaCyc: PWY-5384|MetaCyc: PWY-5514|MetaCyc: PWY-5659|MetaCyc: PWY-6142|MetaCyc: PWY-621|MetaCyc: PWY-622|MetaCyc: PWY-6981|MetaCyc: PWY-6992|MetaCyc: PWY-7238|MetaCyc: PWY-7347|MetaCyc: PWY-7385|Reactome: R-HSA-5628897|Reactome: R-HSA-6798695|Reactome: R-HSA-70171|Reactome: R-HSA-70263 CDA09_08715 74d84b9ae62d5d8cf6fbc784658567b6 545 Gene3D G3DSA:3.40.50.10490 95 289 1.5E-227 T 01-11-2018 CDA09_19860 0cee756744ba655dffe8f782dde72116 698 Gene3D G3DSA:3.30.450.20 185 266 2.4E-7 T 01-11-2018 CDA09_19860 0cee756744ba655dffe8f782dde72116 698 Gene3D G3DSA:3.30.450.20 31 177 5.3E-24 T 01-11-2018 CDA09_19860 0cee756744ba655dffe8f782dde72116 698 Pfam PF13188 PAS domain 361 425 8.5E-11 T 01-11-2018 IPR000014 PAS domain CDA09_19860 0cee756744ba655dffe8f782dde72116 698 Gene3D G3DSA:3.30.565.10 576 696 7.2E-28 T 01-11-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily CDA09_19860 0cee756744ba655dffe8f782dde72116 698 Pfam PF07730 Histidine kinase 498 565 1.0E-12 T 01-11-2018 IPR011712 Signal transduction histidine kinase, subgroup 3, dimerisation and phosphoacceptor domain GO:0000155|GO:0000160|GO:0016021|GO:0046983 CDA09_19860 0cee756744ba655dffe8f782dde72116 698 Pfam PF02743 Cache domain 40 262 2.7E-15 T 01-11-2018 IPR033479 Double Cache domain 1 CDA09_19860 0cee756744ba655dffe8f782dde72116 698 Gene3D G3DSA:3.30.450.20 348 468 1.0E-21 T 01-11-2018 CDA09_19860 0cee756744ba655dffe8f782dde72116 698 SUPERFAMILY SSF55874 572 695 1.44E-17 T 01-11-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily CDA09_19860 0cee756744ba655dffe8f782dde72116 698 PRINTS PR00344 Bacterial sensor protein C-terminal signature 639 653 5.5E-5 T 01-11-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 CDA09_19860 0cee756744ba655dffe8f782dde72116 698 PRINTS PR00344 Bacterial sensor protein C-terminal signature 658 676 5.5E-5 T 01-11-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 CDA09_19860 0cee756744ba655dffe8f782dde72116 698 PRINTS PR00344 Bacterial sensor protein C-terminal signature 682 695 5.5E-5 T 01-11-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 CDA09_19860 0cee756744ba655dffe8f782dde72116 698 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 358 477 5.9E-19 T 01-11-2018 IPR000014 PAS domain CDA09_19860 0cee756744ba655dffe8f782dde72116 698 SUPERFAMILY SSF55785 353 467 7.15E-22 T 01-11-2018 IPR035965 PAS domain superfamily CDA09_19860 0cee756744ba655dffe8f782dde72116 698 SMART SM00387 603 698 5.2E-8 T 01-11-2018 IPR003594 Histidine kinase/HSP90-like ATPase CDA09_19860 0cee756744ba655dffe8f782dde72116 698 SMART SM00091 361 427 4.2E-10 T 01-11-2018 IPR000014 PAS domain CDA09_20860 6d23931248f0d73815b5993e4e286fed 313 SUPERFAMILY SSF75138 1 133 3.53E-26 T 01-11-2018 IPR028979 HPr(Ser) kinase/phosphorylase-like, N-terminal domain superfamily CDA09_20860 6d23931248f0d73815b5993e4e286fed 313 Gene3D G3DSA:3.40.50.300 133 312 2.6E-63 T 01-11-2018 CDA09_20860 6d23931248f0d73815b5993e4e286fed 313 Pfam PF07475 HPr Serine kinase C-terminal domain 132 301 4.6E-61 T 01-11-2018 IPR011104 HPr kinase/phosphorylase, C-terminal GO:0000155|GO:0000160|GO:0004672|GO:0005524|GO:0006109 CDA09_20860 6d23931248f0d73815b5993e4e286fed 313 Gene3D G3DSA:3.40.1390.20 10 132 1.2E-17 T 01-11-2018 IPR028979 HPr(Ser) kinase/phosphorylase-like, N-terminal domain superfamily CDA09_20860 6d23931248f0d73815b5993e4e286fed 313 SUPERFAMILY SSF53795 134 302 4.27E-34 T 01-11-2018 CDA09_20860 6d23931248f0d73815b5993e4e286fed 313 Hamap MF_01249 HPr kinase/phosphorylase [hprK]. 3 309 34.168 T 01-11-2018 IPR003755 HPr(Ser) kinase/phosphorylase GO:0000155|GO:0000160|GO:0005524|GO:0006109 CDA09_20860 6d23931248f0d73815b5993e4e286fed 313 TIGRFAM TIGR00679 hpr-ser: HPr(Ser) kinase/phosphatase 5 304 7.0E-93 T 01-11-2018 IPR003755 HPr(Ser) kinase/phosphorylase GO:0000155|GO:0000160|GO:0005524|GO:0006109 CDA09_20860 6d23931248f0d73815b5993e4e286fed 313 Pfam PF02603 HPr Serine kinase N terminus 6 128 1.2E-17 T 01-11-2018 IPR011126 HPr(Ser) kinase/phosphorylase, N-terminal GO:0000155|GO:0000160|GO:0004672|GO:0005524|GO:0006109 CDA09_05450 8c88bc12e1f011ca3f95325a79fedf54 277 ProSitePatterns PS01227 Uncharacterized protein family UPF0012 signature. 157 177 - T 01-11-2018 IPR001110 Uncharacterised protein family UPF0012, conserved site CDA09_05450 8c88bc12e1f011ca3f95325a79fedf54 277 Gene3D G3DSA:3.60.110.10 2 274 2.7E-85 T 01-11-2018 IPR036526 Carbon-nitrogen hydrolase superfamily CDA09_05450 8c88bc12e1f011ca3f95325a79fedf54 277 SUPERFAMILY SSF56317 7 270 1.44E-77 T 01-11-2018 IPR036526 Carbon-nitrogen hydrolase superfamily CDA09_05450 8c88bc12e1f011ca3f95325a79fedf54 277 Pfam PF00795 Carbon-nitrogen hydrolase 10 261 2.6E-47 T 01-11-2018 IPR003010 Carbon-nitrogen hydrolase GO:0006807 CDA09_17565 25d6320c59116f5100284291eefa1196 300 SUPERFAMILY SSF48179 178 285 1.47E-34 T 01-11-2018 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily GO:0055114 CDA09_17565 25d6320c59116f5100284291eefa1196 300 Gene3D G3DSA:3.40.50.720 4 180 8.3E-57 T 01-11-2018 CDA09_17565 25d6320c59116f5100284291eefa1196 300 Pfam PF02153 Prephenate dehydrogenase 19 276 1.9E-73 T 01-11-2018 IPR003099 Prephenate dehydrogenase GO:0004665|GO:0006571|GO:0008977|GO:0055114 KEGG: 00400+1.3.1.12|KEGG: 00401+1.3.1.12|MetaCyc: PWY-7303 CDA09_17565 25d6320c59116f5100284291eefa1196 300 Gene3D G3DSA:1.10.3660.10 181 287 1.2E-36 T 01-11-2018 CDA09_17565 25d6320c59116f5100284291eefa1196 300 SUPERFAMILY SSF51735 6 173 5.14E-50 T 01-11-2018 IPR036291 NAD(P)-binding domain superfamily CDA09_12300 4f864be1e0fe8b62f27feae6ffbab639 1521 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 593 699 5.3E-12 T 01-11-2018 IPR000014 PAS domain CDA09_12300 4f864be1e0fe8b62f27feae6ffbab639 1521 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 728 851 3.0E-26 T 01-11-2018 IPR000014 PAS domain CDA09_12300 4f864be1e0fe8b62f27feae6ffbab639 1521 Pfam PF00512 His Kinase A (phospho-acceptor) domain 868 933 1.0E-17 T 01-11-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 CDA09_12300 4f864be1e0fe8b62f27feae6ffbab639 1521 Pfam PF01627 Hpt domain 1421 1500 1.2E-7 T 01-11-2018 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160 CDA09_12300 4f864be1e0fe8b62f27feae6ffbab639 1521 Pfam PF00072 Response regulator receiver domain 1260 1372 2.9E-22 T 01-11-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 CDA09_12300 4f864be1e0fe8b62f27feae6ffbab639 1521 SUPERFAMILY SSF55785 717 846 1.18E-23 T 01-11-2018 IPR035965 PAS domain superfamily CDA09_12300 4f864be1e0fe8b62f27feae6ffbab639 1521 SUPERFAMILY SSF47226 1355 1498 1.7E-19 T 01-11-2018 IPR036641 HPT domain superfamily GO:0000160 CDA09_12300 4f864be1e0fe8b62f27feae6ffbab639 1521 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 981 1098 1.6E-29 T 01-11-2018 IPR003594 Histidine kinase/HSP90-like ATPase CDA09_12300 4f864be1e0fe8b62f27feae6ffbab639 1521 Pfam PF03924 CHASE domain 309 491 1.8E-28 T 01-11-2018 IPR006189 CHASE domain CDA09_12300 4f864be1e0fe8b62f27feae6ffbab639 1521 SMART SM00448 1258 1372 1.3E-31 T 01-11-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 CDA09_12300 4f864be1e0fe8b62f27feae6ffbab639 1521 Pfam PF08447 PAS fold 614 684 8.2E-12 T 01-11-2018 IPR013655 PAS fold-3 GO:0005515 CDA09_12300 4f864be1e0fe8b62f27feae6ffbab639 1521 Gene3D G3DSA:3.30.450.20 731 846 2.9E-31 T 01-11-2018 CDA09_12300 4f864be1e0fe8b62f27feae6ffbab639 1521 SMART SM00091 590 656 4.5E-6 T 01-11-2018 IPR000014 PAS domain CDA09_12300 4f864be1e0fe8b62f27feae6ffbab639 1521 SMART SM00091 732 798 3.0E-10 T 01-11-2018 IPR000014 PAS domain CDA09_12300 4f864be1e0fe8b62f27feae6ffbab639 1521 PRINTS PR00344 Bacterial sensor protein C-terminal signature 1042 1052 1.0E-17 T 01-11-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 CDA09_12300 4f864be1e0fe8b62f27feae6ffbab639 1521 PRINTS PR00344 Bacterial sensor protein C-terminal signature 1024 1038 1.0E-17 T 01-11-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 CDA09_12300 4f864be1e0fe8b62f27feae6ffbab639 1521 PRINTS PR00344 Bacterial sensor protein C-terminal signature 1059 1077 1.0E-17 T 01-11-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 CDA09_12300 4f864be1e0fe8b62f27feae6ffbab639 1521 PRINTS PR00344 Bacterial sensor protein C-terminal signature 1083 1096 1.0E-17 T 01-11-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 CDA09_12300 4f864be1e0fe8b62f27feae6ffbab639 1521 SUPERFAMILY SSF47384 851 934 7.26E-21 T 01-11-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 CDA09_12300 4f864be1e0fe8b62f27feae6ffbab639 1521 SMART SM01079 305 500 1.6E-26 T 01-11-2018 IPR006189 CHASE domain CDA09_12300 4f864be1e0fe8b62f27feae6ffbab639 1521 SUPERFAMILY SSF52172 1257 1377 5.98E-34 T 01-11-2018 IPR011006 CheY-like superfamily CDA09_12300 4f864be1e0fe8b62f27feae6ffbab639 1521 SMART SM00086 662 699 1.9 T 01-11-2018 IPR001610 PAC motif CDA09_12300 4f864be1e0fe8b62f27feae6ffbab639 1521 SMART SM00086 808 848 0.34 T 01-11-2018 IPR001610 PAC motif CDA09_12300 4f864be1e0fe8b62f27feae6ffbab639 1521 SMART SM00387 980 1099 3.4E-39 T 01-11-2018 IPR003594 Histidine kinase/HSP90-like ATPase CDA09_12300 4f864be1e0fe8b62f27feae6ffbab639 1521 SUPERFAMILY SSF55874 922 1100 1.83E-45 T 01-11-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily CDA09_12300 4f864be1e0fe8b62f27feae6ffbab639 1521 Gene3D G3DSA:1.20.120.160 1398 1506 2.2E-17 T 01-11-2018 IPR036641 HPT domain superfamily GO:0000160 CDA09_12300 4f864be1e0fe8b62f27feae6ffbab639 1521 SMART SM00388 868 933 6.9E-21 T 01-11-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 CDA09_12300 4f864be1e0fe8b62f27feae6ffbab639 1521 Pfam PF05231 MASE1 62 238 1.8E-15 T 01-11-2018 IPR007895 MASE1 CDA09_12300 4f864be1e0fe8b62f27feae6ffbab639 1521 Gene3D G3DSA:1.10.287.130 847 931 2.4E-26 T 01-11-2018 CDA09_12300 4f864be1e0fe8b62f27feae6ffbab639 1521 Pfam PF00989 PAS fold 732 845 1.2E-11 T 01-11-2018 IPR013767 PAS fold GO:0006355 CDA09_12300 4f864be1e0fe8b62f27feae6ffbab639 1521 Gene3D G3DSA:3.40.50.2300 1252 1376 2.4E-37 T 01-11-2018 CDA09_12300 4f864be1e0fe8b62f27feae6ffbab639 1521 SUPERFAMILY SSF55785 598 700 1.01E-18 T 01-11-2018 IPR035965 PAS domain superfamily CDA09_12300 4f864be1e0fe8b62f27feae6ffbab639 1521 Gene3D G3DSA:3.30.565.10 932 1102 8.4E-48 T 01-11-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily CDA09_12300 4f864be1e0fe8b62f27feae6ffbab639 1521 Gene3D G3DSA:3.30.450.20 599 730 1.1E-18 T 01-11-2018 CDA09_12300 4f864be1e0fe8b62f27feae6ffbab639 1521 Gene3D G3DSA:3.30.450.350 310 504 1.7E-23 T 01-11-2018 CDA09_20595 1c9a45bf6a263fb5a802e689e79bc93e 313 Gene3D G3DSA:1.10.10.10 1 85 7.9E-23 T 01-11-2018 IPR036388 Winged helix-like DNA-binding domain superfamily CDA09_20595 1c9a45bf6a263fb5a802e689e79bc93e 313 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 3 64 2.3E-17 T 01-11-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 CDA09_20595 1c9a45bf6a263fb5a802e689e79bc93e 313 Gene3D G3DSA:3.40.190.10 167 267 7.0E-96 T 01-11-2018 CDA09_20595 1c9a45bf6a263fb5a802e689e79bc93e 313 Gene3D G3DSA:3.40.190.10 93 301 7.0E-96 T 01-11-2018 CDA09_20595 1c9a45bf6a263fb5a802e689e79bc93e 313 SUPERFAMILY SSF46785 1 88 2.93E-16 T 01-11-2018 IPR036390 Winged helix DNA-binding domain superfamily CDA09_20595 1c9a45bf6a263fb5a802e689e79bc93e 313 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 30 40 2.0E-6 T 01-11-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 CDA09_20595 1c9a45bf6a263fb5a802e689e79bc93e 313 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 19 30 2.0E-6 T 01-11-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 CDA09_20595 1c9a45bf6a263fb5a802e689e79bc93e 313 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 40 51 2.0E-6 T 01-11-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 CDA09_20595 1c9a45bf6a263fb5a802e689e79bc93e 313 SUPERFAMILY SSF53850 88 300 6.88E-41 T 01-11-2018 CDA09_20595 1c9a45bf6a263fb5a802e689e79bc93e 313 Pfam PF03466 LysR substrate binding domain 90 294 3.3E-40 T 01-11-2018 IPR005119 LysR, substrate-binding CDA09_15235 0d281aaeddaa39fc5a7e795e93b42a6c 79 Gene3D G3DSA:3.40.30.10 1 70 7.6E-15 T 01-11-2018 CDA09_15235 0d281aaeddaa39fc5a7e795e93b42a6c 79 SUPERFAMILY SSF52833 2 69 6.51E-12 T 01-11-2018 IPR036249 Thioredoxin-like superfamily CDA09_15235 0d281aaeddaa39fc5a7e795e93b42a6c 79 Pfam PF05768 Glutaredoxin-like domain (DUF836) 2 68 4.5E-9 T 01-11-2018 IPR008554 Glutaredoxin-like CDA09_17320 580be5b6ef0833651688c196a577cd56 258 Pfam PF04539 Sigma-70 region 3 95 152 9.7E-15 T 01-11-2018 IPR007624 RNA polymerase sigma-70 region 3 GO:0003700|GO:0006352|GO:0006355 CDA09_17320 580be5b6ef0833651688c196a577cd56 258 SUPERFAMILY SSF88659 86 156 1.92E-17 T 01-11-2018 IPR013324 RNA polymerase sigma factor, region 3/4-like CDA09_17320 580be5b6ef0833651688c196a577cd56 258 Hamap MF_00962 RNA polymerase sigma factor FliA [fliA]. 2 236 64.967 T 01-11-2018 IPR028617 RNA polymerase sigma factor FliA GO:0003677|GO:0003899|GO:0006352|GO:0006355|GO:0016987 CDA09_17320 580be5b6ef0833651688c196a577cd56 258 ProSitePatterns PS00716 Sigma-70 factors family signature 2. 203 229 - T 01-11-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 CDA09_17320 580be5b6ef0833651688c196a577cd56 258 TIGRFAM TIGR02479 FliA_WhiG: RNA polymerase sigma factor, FliA/WhiG family 13 232 2.3E-85 T 01-11-2018 IPR012845 RNA polymerase sigma factor, FliA/WhiG GO:0003677|GO:0003899|GO:0006352|GO:0006355|GO:0016987 CDA09_17320 580be5b6ef0833651688c196a577cd56 258 SUPERFAMILY SSF88946 5 85 5.89E-25 T 01-11-2018 IPR013325 RNA polymerase sigma factor, region 2 GO:0003700|GO:0006352|GO:0006355 CDA09_17320 580be5b6ef0833651688c196a577cd56 258 SUPERFAMILY SSF88659 146 233 4.67E-22 T 01-11-2018 IPR013324 RNA polymerase sigma factor, region 3/4-like CDA09_17320 580be5b6ef0833651688c196a577cd56 258 Pfam PF04545 Sigma-70, region 4 182 230 4.0E-16 T 01-11-2018 IPR007630 RNA polymerase sigma-70 region 4 GO:0003700|GO:0006352|GO:0006355 CDA09_17320 580be5b6ef0833651688c196a577cd56 258 TIGRFAM TIGR02937 sigma70-ECF: RNA polymerase sigma factor, sigma-70 family 11 232 1.3E-35 T 01-11-2018 IPR014284 RNA polymerase sigma-70 like domain GO:0003700|GO:0006352|GO:0006355 CDA09_17320 580be5b6ef0833651688c196a577cd56 258 PRINTS PR00046 Major sigma-70 factor signature 186 198 9.8E-13 T 01-11-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 CDA09_17320 580be5b6ef0833651688c196a577cd56 258 PRINTS PR00046 Major sigma-70 factor signature 203 218 9.8E-13 T 01-11-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 CDA09_17320 580be5b6ef0833651688c196a577cd56 258 PRINTS PR00046 Major sigma-70 factor signature 218 229 9.8E-13 T 01-11-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 CDA09_17320 580be5b6ef0833651688c196a577cd56 258 PRINTS PR00046 Major sigma-70 factor signature 40 53 9.8E-13 T 01-11-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 CDA09_17320 580be5b6ef0833651688c196a577cd56 258 PRINTS PR00046 Major sigma-70 factor signature 64 72 9.8E-13 T 01-11-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 CDA09_17320 580be5b6ef0833651688c196a577cd56 258 ProSitePatterns PS00715 Sigma-70 factors family signature 1. 40 53 - T 01-11-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 CDA09_17320 580be5b6ef0833651688c196a577cd56 258 PIRSF PIRSF000770 3 238 4.8E-40 T 01-11-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 CDA09_17320 580be5b6ef0833651688c196a577cd56 258 Gene3D G3DSA:1.20.140.160 84 234 3.2E-47 T 01-11-2018 CDA09_17320 580be5b6ef0833651688c196a577cd56 258 Pfam PF04542 Sigma-70 region 2 13 85 9.4E-18 T 01-11-2018 IPR007627 RNA polymerase sigma-70 region 2 GO:0003700|GO:0006352|GO:0006355 CDA09_17320 580be5b6ef0833651688c196a577cd56 258 Gene3D G3DSA:1.10.1740.10 2 82 3.0E-29 T 01-11-2018 CDA09_21670 8aa07b86cd5dee50555225c7c88772f9 144 TIGRFAM TIGR03751 conj_TIGR03751: conjugative transfer region lipoprotein, TIGR03751 family 12 140 6.6E-53 T 01-11-2018 IPR022262 Lipoprotein, putative CDA09_16800 71ef4095dbade6443667cb27b321728a 463 Gene3D G3DSA:3.80.30.20 2 369 2.3E-124 T 01-11-2018 IPR023404 Radical SAM, alpha/beta horseshoe CDA09_16800 71ef4095dbade6443667cb27b321728a 463 Pfam PF06969 HemN C-terminal domain 369 437 6.6E-7 T 01-11-2018 IPR010723 HemN, C-terminal CDA09_16800 71ef4095dbade6443667cb27b321728a 463 PIRSF PIRSF000167 7 460 6.8E-160 T 01-11-2018 IPR004558 Oxygen-independent coproporphyrinogen III oxidase HemN GO:0004109|GO:0005737|GO:0006779|GO:0055114 KEGG: 00860+1.3.98.3|MetaCyc: PWY-5531 CDA09_16800 71ef4095dbade6443667cb27b321728a 463 TIGRFAM TIGR00538 hemN: oxygen-independent coproporphyrinogen III oxidase 9 463 7.5E-178 T 01-11-2018 IPR004558 Oxygen-independent coproporphyrinogen III oxidase HemN GO:0004109|GO:0005737|GO:0006779|GO:0055114 KEGG: 00860+1.3.98.3|MetaCyc: PWY-5531 CDA09_16800 71ef4095dbade6443667cb27b321728a 463 SMART SM00729 57 278 5.3E-47 T 01-11-2018 IPR006638 Elp3/MiaB/NifB GO:0003824|GO:0051536 CDA09_16800 71ef4095dbade6443667cb27b321728a 463 Pfam PF04055 Radical SAM superfamily 63 233 2.1E-18 T 01-11-2018 IPR007197 Radical SAM GO:0003824|GO:0051536 CDA09_16800 71ef4095dbade6443667cb27b321728a 463 SUPERFAMILY SSF102114 8 450 2.09E-135 T 01-11-2018 CDA09_16800 71ef4095dbade6443667cb27b321728a 463 Gene3D G3DSA:1.10.10.920 370 463 1.0E-31 T 01-11-2018 CDA09_18285 74d75ee25d82ec034e9237f69c2326e4 163 TIGRFAM TIGR01088 aroQ: 3-dehydroquinate dehydratase, type II 19 159 2.0E-60 T 01-11-2018 IPR001874 Dehydroquinase, class II GO:0003855 KEGG: 00400+4.2.1.10|MetaCyc: PWY-6163|MetaCyc: PWY-6416|MetaCyc: PWY-6707 CDA09_18285 74d75ee25d82ec034e9237f69c2326e4 163 Hamap MF_00169 3-dehydroquinate dehydratase [aroQ]. 1 163 74.796 T 01-11-2018 IPR001874 Dehydroquinase, class II GO:0003855 KEGG: 00400+4.2.1.10|MetaCyc: PWY-6163|MetaCyc: PWY-6416|MetaCyc: PWY-6707 CDA09_18285 74d75ee25d82ec034e9237f69c2326e4 163 PIRSF PIRSF001399 16 163 3.5E-61 T 01-11-2018 IPR001874 Dehydroquinase, class II GO:0003855 KEGG: 00400+4.2.1.10|MetaCyc: PWY-6163|MetaCyc: PWY-6416|MetaCyc: PWY-6707 CDA09_18285 74d75ee25d82ec034e9237f69c2326e4 163 ProSitePatterns PS01029 Dehydroquinase class II signature. 23 40 - T 01-11-2018 IPR018509 Dehydroquinase, class II, conserved site GO:0003855 KEGG: 00400+4.2.1.10|MetaCyc: PWY-6163|MetaCyc: PWY-6416|MetaCyc: PWY-6707 CDA09_18285 74d75ee25d82ec034e9237f69c2326e4 163 Pfam PF01220 Dehydroquinase class II 19 156 1.1E-61 T 01-11-2018 IPR001874 Dehydroquinase, class II GO:0003855 KEGG: 00400+4.2.1.10|MetaCyc: PWY-6163|MetaCyc: PWY-6416|MetaCyc: PWY-6707 CDA09_18285 74d75ee25d82ec034e9237f69c2326e4 163 SUPERFAMILY SSF52304 19 161 3.4E-62 T 01-11-2018 IPR036441 Dehydroquinase, class II superfamily GO:0003855 KEGG: 00400+4.2.1.10|MetaCyc: PWY-6163|MetaCyc: PWY-6416|MetaCyc: PWY-6707 CDA09_18285 74d75ee25d82ec034e9237f69c2326e4 163 Gene3D G3DSA:3.40.50.9100 6 163 1.1E-66 T 01-11-2018 IPR036441 Dehydroquinase, class II superfamily GO:0003855 KEGG: 00400+4.2.1.10|MetaCyc: PWY-6163|MetaCyc: PWY-6416|MetaCyc: PWY-6707 CDA09_18285 74d75ee25d82ec034e9237f69c2326e4 163 ProDom PD004527 LYASE II 3-DEHYDROQUINATE BIOSYNTHESIS DEHYDRATASE TYPE 3-DEHYDROQUINASE DHQASE AMINO AROMATIC 20 159 2.0E-64 T 01-11-2018 CDA09_04420 200bdc964182dc35bc60b95a22cc3e65 418 Pfam PF04551 GcpE protein 19 406 1.2E-113 T 01-11-2018 IPR004588 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase, bacterial-type GO:0016114|GO:0046429|GO:0055114 KEGG: 00900+1.17.7.3 CDA09_04420 200bdc964182dc35bc60b95a22cc3e65 418 Hamap MF_00159 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase (ferredoxin) [ispG]. 14 408 29.877 T 01-11-2018 IPR004588 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase, bacterial-type GO:0016114|GO:0046429|GO:0055114 KEGG: 00900+1.17.7.3 CDA09_04420 200bdc964182dc35bc60b95a22cc3e65 418 Gene3D G3DSA:3.20.20.20 13 299 3.7E-98 T 01-11-2018 IPR011005 Dihydropteroate synthase-like GO:0044237 Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 CDA09_04420 200bdc964182dc35bc60b95a22cc3e65 418 Gene3D G3DSA:3.30.413.10 300 417 1.4E-36 T 01-11-2018 CDA09_04420 200bdc964182dc35bc60b95a22cc3e65 418 TIGRFAM TIGR00612 ispG_gcpE: 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase 16 405 9.0E-122 T 01-11-2018 IPR004588 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase, bacterial-type GO:0016114|GO:0046429|GO:0055114 KEGG: 00900+1.17.7.3 CDA09_04420 200bdc964182dc35bc60b95a22cc3e65 418 PIRSF PIRSF004640 9 416 7.0E-133 T 01-11-2018 IPR016425 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase, bacterial GO:0005506|GO:0008299|GO:0046429|GO:0055114 KEGG: 00900+1.17.7.3 CDA09_07970 d82adb07529697dfb0dc844a0b3786fc 325 Pfam PF10282 Lactonase, 7-bladed beta-propeller 26 127 1.1E-8 T 01-11-2018 IPR019405 Lactonase, 7-bladed beta propeller CDA09_07970 d82adb07529697dfb0dc844a0b3786fc 325 Pfam PF10282 Lactonase, 7-bladed beta-propeller 184 302 3.9E-7 T 01-11-2018 IPR019405 Lactonase, 7-bladed beta propeller CDA09_07970 d82adb07529697dfb0dc844a0b3786fc 325 TIGRFAM TIGR02276 beta_rpt_yvtn: 40-residue YVTN family beta-propeller repeat 149 188 5.4E-10 T 01-11-2018 IPR011964 YVTN beta-propeller repeat CDA09_07970 d82adb07529697dfb0dc844a0b3786fc 325 TIGRFAM TIGR02276 beta_rpt_yvtn: 40-residue YVTN family beta-propeller repeat 26 60 3.4E-7 T 01-11-2018 IPR011964 YVTN beta-propeller repeat CDA09_07970 d82adb07529697dfb0dc844a0b3786fc 325 TIGRFAM TIGR02276 beta_rpt_yvtn: 40-residue YVTN family beta-propeller repeat 107 145 3.7E-11 T 01-11-2018 IPR011964 YVTN beta-propeller repeat CDA09_07970 d82adb07529697dfb0dc844a0b3786fc 325 TIGRFAM TIGR02276 beta_rpt_yvtn: 40-residue YVTN family beta-propeller repeat 284 324 8.9E-12 T 01-11-2018 IPR011964 YVTN beta-propeller repeat CDA09_07970 d82adb07529697dfb0dc844a0b3786fc 325 TIGRFAM TIGR03866 PQQ_ABC_repeats: PQQ-dependent catabolism-associated beta-propeller protein 19 324 1.4E-110 T 01-11-2018 IPR022456 PQQ-dependent catabolism-associated beta-propeller protein CDA09_07970 d82adb07529697dfb0dc844a0b3786fc 325 Gene3D G3DSA:2.130.10.10 230 325 1.4E-24 T 01-11-2018 IPR015943 WD40/YVTN repeat-like-containing domain superfamily GO:0005515 CDA09_07970 d82adb07529697dfb0dc844a0b3786fc 325 Gene3D G3DSA:2.130.10.10 18 229 4.1E-58 T 01-11-2018 IPR015943 WD40/YVTN repeat-like-containing domain superfamily GO:0005515 CDA09_07970 d82adb07529697dfb0dc844a0b3786fc 325 SUPERFAMILY SSF50974 7 323 4.84E-77 T 01-11-2018 IPR011045 Nitrous oxide reductase, N-terminal Reactome: R-HSA-114608 CDA09_20515 a00235412255394e7b7e43860deed7bc 793 Gene3D G3DSA:3.90.226.10 479 686 1.2E-24 T 01-11-2018 CDA09_20515 a00235412255394e7b7e43860deed7bc 793 Gene3D G3DSA:3.40.50.720 3 194 5.9E-56 T 01-11-2018 CDA09_20515 a00235412255394e7b7e43860deed7bc 793 Pfam PF00378 Enoyl-CoA hydratase/isomerase 498 620 2.8E-13 T 01-11-2018 IPR001753 Enoyl-CoA hydratase/isomerase GO:0003824 CDA09_20515 a00235412255394e7b7e43860deed7bc 793 Pfam PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain 8 191 3.3E-44 T 01-11-2018 IPR006176 3-hydroxyacyl-CoA dehydrogenase, NAD binding GO:0003857|GO:0006631|GO:0016491|GO:0055114 KEGG: 00062+4.2.1.17+1.1.1.35|KEGG: 00071+4.2.1.17+1.1.1.35|KEGG: 00120+1.1.1.35|KEGG: 00280+4.2.1.17+1.1.1.35|KEGG: 00281+4.2.1.17+1.1.1.35|KEGG: 00310+4.2.1.17+1.1.1.35|KEGG: 00360+4.2.1.17|KEGG: 00362+4.2.1.17+1.1.1.35|KEGG: 00380+4.2.1.17+1.1.1.35|KEGG: 00410+4.2.1.17|KEGG: 00592+4.2.1.17|KEGG: 00623+1.1.1.35|KEGG: 00627+4.2.1.17|KEGG: 00640+4.2.1.17|KEGG: 00650+4.2.1.17+1.1.1.35|KEGG: 00720+4.2.1.17+1.1.1.35|KEGG: 00903+4.2.1.17|KEGG: 00930+4.2.1.17+1.1.1.35|MetaCyc: PWY-1361|MetaCyc: PWY-5109|MetaCyc: PWY-5136|MetaCyc: PWY-5138|MetaCyc: PWY-5177|MetaCyc: PWY-5789|MetaCyc: PWY-6435|MetaCyc: PWY-6583|MetaCyc: PWY-6863|MetaCyc: PWY-6883|MetaCyc: PWY-6944|MetaCyc: PWY-6945|MetaCyc: PWY-6946|MetaCyc: PWY-7007|MetaCyc: PWY-7046|MetaCyc: PWY-7094|MetaCyc: PWY-7216|MetaCyc: PWY-735|MetaCyc: PWY-7401|MetaCyc: PWY-7606|MetaCyc: PWY-7654|MetaCyc: PWY-7656|MetaCyc: PWY-7726|MetaCyc: PWY-7778|MetaCyc: PWY-7779 CDA09_20515 a00235412255394e7b7e43860deed7bc 793 Pfam PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain 194 293 2.8E-8 T 01-11-2018 IPR006108 3-hydroxyacyl-CoA dehydrogenase, C-terminal GO:0003857|GO:0006631|GO:0016491|GO:0055114 KEGG: 00062+4.2.1.17+1.1.1.35|KEGG: 00071+4.2.1.17+1.1.1.35|KEGG: 00120+1.1.1.35|KEGG: 00280+4.2.1.17+1.1.1.35|KEGG: 00281+4.2.1.17+1.1.1.35|KEGG: 00310+4.2.1.17+1.1.1.35|KEGG: 00360+4.2.1.17|KEGG: 00362+4.2.1.17+1.1.1.35|KEGG: 00380+4.2.1.17+1.1.1.35|KEGG: 00410+4.2.1.17|KEGG: 00592+4.2.1.17|KEGG: 00623+1.1.1.35|KEGG: 00627+4.2.1.17|KEGG: 00640+4.2.1.17|KEGG: 00650+4.2.1.17+1.1.1.35|KEGG: 00720+4.2.1.17+1.1.1.35|KEGG: 00903+4.2.1.17|KEGG: 00930+4.2.1.17+1.1.1.35|MetaCyc: PWY-1361|MetaCyc: PWY-5109|MetaCyc: PWY-5136|MetaCyc: PWY-5138|MetaCyc: PWY-5177|MetaCyc: PWY-5789|MetaCyc: PWY-6435|MetaCyc: PWY-6583|MetaCyc: PWY-6863|MetaCyc: PWY-6883|MetaCyc: PWY-6944|MetaCyc: PWY-6945|MetaCyc: PWY-6946|MetaCyc: PWY-7007|MetaCyc: PWY-7046|MetaCyc: PWY-7094|MetaCyc: PWY-7216|MetaCyc: PWY-735|MetaCyc: PWY-7401|MetaCyc: PWY-7606|MetaCyc: PWY-7654|MetaCyc: PWY-7656|MetaCyc: PWY-7726|MetaCyc: PWY-7778|MetaCyc: PWY-7779 CDA09_20515 a00235412255394e7b7e43860deed7bc 793 SUPERFAMILY SSF51735 5 192 1.25E-42 T 01-11-2018 IPR036291 NAD(P)-binding domain superfamily CDA09_20515 a00235412255394e7b7e43860deed7bc 793 SUPERFAMILY SSF48179 192 310 2.13E-20 T 01-11-2018 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily GO:0055114 CDA09_20515 a00235412255394e7b7e43860deed7bc 793 SUPERFAMILY SSF52096 486 789 1.61E-31 T 01-11-2018 IPR029045 ClpP/crotonase-like domain superfamily CDA09_20515 a00235412255394e7b7e43860deed7bc 793 SUPERFAMILY SSF48179 345 457 1.11E-15 T 01-11-2018 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily GO:0055114 CDA09_20515 a00235412255394e7b7e43860deed7bc 793 Gene3D G3DSA:1.10.1040.10 195 309 2.8E-15 T 01-11-2018 IPR013328 6-phosphogluconate dehydrogenase, domain 2 GO:0016491|GO:0055114 CDA09_07725 b83469564002001d602dc7e4a55502c1 746 SMART SM00448 26 138 2.3E-28 T 01-11-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 CDA09_07725 b83469564002001d602dc7e4a55502c1 746 Gene3D G3DSA:3.40.50.2300 19 164 4.8E-35 T 01-11-2018 CDA09_07725 b83469564002001d602dc7e4a55502c1 746 SUPERFAMILY SSF160246 175 314 4.45E-28 T 01-11-2018 IPR037257 General secretory system II, protein E, N-terminal superfamily CDA09_07725 b83469564002001d602dc7e4a55502c1 746 Gene3D G3DSA:3.40.50.300 468 743 6.2E-99 T 01-11-2018 CDA09_07725 b83469564002001d602dc7e4a55502c1 746 ProSitePatterns PS00662 Bacterial type II secretion system protein E signature. 562 576 - T 01-11-2018 IPR001482 Type II/IV secretion system protein CDA09_07725 b83469564002001d602dc7e4a55502c1 746 Gene3D G3DSA:3.30.450.90 338 467 2.1E-45 T 01-11-2018 CDA09_07725 b83469564002001d602dc7e4a55502c1 746 Pfam PF00437 Type II/IV secretion system protein 368 634 4.9E-73 T 01-11-2018 IPR001482 Type II/IV secretion system protein CDA09_07725 b83469564002001d602dc7e4a55502c1 746 Pfam PF05157 Type II secretion system (T2SS), protein E, N-terminal domain 212 317 3.0E-19 T 01-11-2018 IPR007831 General secretory system II, protein E, N-terminal CDA09_07725 b83469564002001d602dc7e4a55502c1 746 SUPERFAMILY SSF52540 352 740 1.37E-93 T 01-11-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CDA09_07725 b83469564002001d602dc7e4a55502c1 746 Pfam PF00072 Response regulator receiver domain 29 137 1.9E-23 T 01-11-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 CDA09_07725 b83469564002001d602dc7e4a55502c1 746 Gene3D G3DSA:3.30.300.160 233 314 1.0E-8 T 01-11-2018 CDA09_07725 b83469564002001d602dc7e4a55502c1 746 SUPERFAMILY SSF52172 25 158 4.55E-35 T 01-11-2018 IPR011006 CheY-like superfamily CDA09_05630 9c364c4e259304e8cfda31f6817a7f16 308 Gene3D G3DSA:3.40.190.10 104 289 1.1E-60 T 01-11-2018 CDA09_05630 9c364c4e259304e8cfda31f6817a7f16 308 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 23 34 1.8E-9 T 01-11-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 CDA09_05630 9c364c4e259304e8cfda31f6817a7f16 308 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 34 44 1.8E-9 T 01-11-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 CDA09_05630 9c364c4e259304e8cfda31f6817a7f16 308 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 44 55 1.8E-9 T 01-11-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 CDA09_05630 9c364c4e259304e8cfda31f6817a7f16 308 SUPERFAMILY SSF46785 2 82 4.32E-20 T 01-11-2018 IPR036390 Winged helix DNA-binding domain superfamily CDA09_05630 9c364c4e259304e8cfda31f6817a7f16 308 Gene3D G3DSA:1.10.10.10 9 75 1.1E-21 T 01-11-2018 IPR036388 Winged helix-like DNA-binding domain superfamily CDA09_05630 9c364c4e259304e8cfda31f6817a7f16 308 Gene3D G3DSA:3.40.190.10 164 262 1.1E-60 T 01-11-2018 CDA09_05630 9c364c4e259304e8cfda31f6817a7f16 308 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 9 66 4.9E-20 T 01-11-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 CDA09_05630 9c364c4e259304e8cfda31f6817a7f16 308 SUPERFAMILY SSF53850 92 296 1.32E-40 T 01-11-2018 CDA09_05630 9c364c4e259304e8cfda31f6817a7f16 308 Pfam PF03466 LysR substrate binding domain 91 293 9.1E-39 T 01-11-2018 IPR005119 LysR, substrate-binding CDA09_00060 6f2f60d33a63f40bd52f8754abaa91c3 531 Pfam PF13784 Fic/DOC family N-terminal 46 122 8.1E-21 T 01-11-2018 IPR025758 Fic/DOC N-terminal CDA09_00060 6f2f60d33a63f40bd52f8754abaa91c3 531 Gene3D G3DSA:1.10.3290.10 45 302 5.9E-50 T 01-11-2018 IPR036597 Fido-like domain superfamily CDA09_00060 6f2f60d33a63f40bd52f8754abaa91c3 531 Pfam PF02661 Fic/DOC family 133 242 3.7E-18 T 01-11-2018 IPR003812 Fido domain CDA09_00060 6f2f60d33a63f40bd52f8754abaa91c3 531 SUPERFAMILY SSF140931 107 308 5.62E-39 T 01-11-2018 IPR036597 Fido-like domain superfamily CDA09_18845 f3df82e9be512755592d9760aad9a0dc 472 Pfam PF13533 Biotin-lipoyl like 100 143 1.7E-9 T 01-11-2018 IPR039562 Membrane fusion protein, biotin-lipoyl like domain CDA09_18845 f3df82e9be512755592d9760aad9a0dc 472 Gene3D G3DSA:1.10.287.470 134 158 2.2E-9 T 01-11-2018 CDA09_18845 f3df82e9be512755592d9760aad9a0dc 472 Gene3D G3DSA:1.10.287.470 197 305 5.5E-14 T 01-11-2018 CDA09_18845 f3df82e9be512755592d9760aad9a0dc 472 SUPERFAMILY SSF111369 97 166 5.36E-8 T 01-11-2018 CDA09_18845 f3df82e9be512755592d9760aad9a0dc 472 Gene3D G3DSA:2.40.50.100 193 363 5.5E-14 T 01-11-2018 CDA09_18845 f3df82e9be512755592d9760aad9a0dc 472 Pfam PF13437 HlyD family secretion protein 327 438 4.3E-16 T 01-11-2018 CDA09_18845 f3df82e9be512755592d9760aad9a0dc 472 Gene3D G3DSA:2.40.30.170 364 449 5.5E-14 T 01-11-2018 CDA09_18845 f3df82e9be512755592d9760aad9a0dc 472 Gene3D G3DSA:2.40.50.100 99 133 2.2E-9 T 01-11-2018 CDA09_18845 f3df82e9be512755592d9760aad9a0dc 472 TIGRFAM TIGR01843 type_I_hlyD: type I secretion membrane fusion protein, HlyD family 61 472 4.7E-118 T 01-11-2018 IPR010129 Type I secretion membrane fusion protein, HlyD family GO:0015031|GO:0016021 CDA09_18845 f3df82e9be512755592d9760aad9a0dc 472 PRINTS PR01490 Gram-negative bacterial RTX secretion protein D signature 396 419 3.9E-42 T 01-11-2018 IPR003997 RTX secretion protein D, Gram-negative bacteria GO:0009306|GO:0016020 CDA09_18845 f3df82e9be512755592d9760aad9a0dc 472 PRINTS PR01490 Gram-negative bacterial RTX secretion protein D signature 112 132 3.9E-42 T 01-11-2018 IPR003997 RTX secretion protein D, Gram-negative bacteria GO:0009306|GO:0016020 CDA09_18845 f3df82e9be512755592d9760aad9a0dc 472 PRINTS PR01490 Gram-negative bacterial RTX secretion protein D signature 339 360 3.9E-42 T 01-11-2018 IPR003997 RTX secretion protein D, Gram-negative bacteria GO:0009306|GO:0016020 CDA09_18845 f3df82e9be512755592d9760aad9a0dc 472 PRINTS PR01490 Gram-negative bacterial RTX secretion protein D signature 372 396 3.9E-42 T 01-11-2018 IPR003997 RTX secretion protein D, Gram-negative bacteria GO:0009306|GO:0016020 CDA09_18845 f3df82e9be512755592d9760aad9a0dc 472 PRINTS PR01490 Gram-negative bacterial RTX secretion protein D signature 436 451 3.9E-42 T 01-11-2018 IPR003997 RTX secretion protein D, Gram-negative bacteria GO:0009306|GO:0016020 CDA09_18845 f3df82e9be512755592d9760aad9a0dc 472 PRINTS PR01490 Gram-negative bacterial RTX secretion protein D signature 451 471 3.9E-42 T 01-11-2018 IPR003997 RTX secretion protein D, Gram-negative bacteria GO:0009306|GO:0016020 CDA09_18845 f3df82e9be512755592d9760aad9a0dc 472 PRINTS PR01490 Gram-negative bacterial RTX secretion protein D signature 70 93 3.9E-42 T 01-11-2018 IPR003997 RTX secretion protein D, Gram-negative bacteria GO:0009306|GO:0016020 CDA09_04075 24841a2c7ad45eec877639d20aaaa1e8 467 SUPERFAMILY SSF63411 268 451 8.83E-46 T 01-11-2018 IPR011249 Metalloenzyme, LuxS/M16 peptidase-like GO:0003824|GO:0046872 CDA09_04075 24841a2c7ad45eec877639d20aaaa1e8 467 Pfam PF00675 Insulinase (Peptidase family M16) 58 200 2.6E-7 T 01-11-2018 IPR011765 Peptidase M16, N-terminal CDA09_04075 24841a2c7ad45eec877639d20aaaa1e8 467 Gene3D G3DSA:3.30.830.10 258 451 1.1E-54 T 01-11-2018 CDA09_04075 24841a2c7ad45eec877639d20aaaa1e8 467 Pfam PF05193 Peptidase M16 inactive domain 207 383 3.0E-33 T 01-11-2018 IPR007863 Peptidase M16, C-terminal CDA09_04075 24841a2c7ad45eec877639d20aaaa1e8 467 SUPERFAMILY SSF63411 42 246 1.07E-43 T 01-11-2018 IPR011249 Metalloenzyme, LuxS/M16 peptidase-like GO:0003824|GO:0046872 CDA09_04075 24841a2c7ad45eec877639d20aaaa1e8 467 Gene3D G3DSA:3.30.830.10 45 254 2.8E-47 T 01-11-2018 CDA09_00540 9f6953474de1c43f63d117a10316d642 140 SUPERFAMILY SSF54197 2 134 8.2E-38 T 01-11-2018 IPR036265 HIT-like superfamily CDA09_00540 9f6953474de1c43f63d117a10316d642 140 Pfam PF01230 HIT domain 10 97 9.5E-15 T 01-11-2018 IPR001310 Histidine triad (HIT) protein CDA09_00540 9f6953474de1c43f63d117a10316d642 140 Gene3D G3DSA:3.30.428.10 6 139 1.8E-40 T 01-11-2018 IPR036265 HIT-like superfamily CDA09_00540 9f6953474de1c43f63d117a10316d642 140 PIRSF PIRSF000714 1 139 5.4E-45 T 01-11-2018 IPR026026 Histidine triad hydrolase, Hint-type CDA09_14990 294c86b4ac1678c173580dbdba424cc9 268 ProSitePatterns PS00630 Inositol monophosphatase family signature 2. 212 226 - T 01-11-2018 IPR020550 Inositol monophosphatase, conserved site GO:0046854 CDA09_14990 294c86b4ac1678c173580dbdba424cc9 268 Pfam PF00459 Inositol monophosphatase family 2 255 4.4E-66 T 01-11-2018 IPR000760 Inositol monophosphatase-like GO:0046854 CDA09_14990 294c86b4ac1678c173580dbdba424cc9 268 ProSitePatterns PS00629 Inositol monophosphatase family signature 1. 82 95 - T 01-11-2018 IPR020583 Inositol monophosphatase, metal-binding site CDA09_14990 294c86b4ac1678c173580dbdba424cc9 268 Gene3D G3DSA:3.30.540.10 1 141 2.9E-52 T 01-11-2018 CDA09_14990 294c86b4ac1678c173580dbdba424cc9 268 SUPERFAMILY SSF56655 1 261 4.19E-87 T 01-11-2018 CDA09_14990 294c86b4ac1678c173580dbdba424cc9 268 PRINTS PR00377 Inositol monophosphatase superfamily signature 209 233 3.5E-61 T 01-11-2018 IPR000760 Inositol monophosphatase-like GO:0046854 CDA09_14990 294c86b4ac1678c173580dbdba424cc9 268 PRINTS PR00377 Inositol monophosphatase superfamily signature 131 154 3.5E-61 T 01-11-2018 IPR000760 Inositol monophosphatase-like GO:0046854 CDA09_14990 294c86b4ac1678c173580dbdba424cc9 268 PRINTS PR00377 Inositol monophosphatase superfamily signature 178 199 3.5E-61 T 01-11-2018 IPR000760 Inositol monophosphatase-like GO:0046854 CDA09_14990 294c86b4ac1678c173580dbdba424cc9 268 PRINTS PR00377 Inositol monophosphatase superfamily signature 38 58 3.5E-61 T 01-11-2018 IPR000760 Inositol monophosphatase-like GO:0046854 CDA09_14990 294c86b4ac1678c173580dbdba424cc9 268 PRINTS PR00377 Inositol monophosphatase superfamily signature 60 76 3.5E-61 T 01-11-2018 IPR000760 Inositol monophosphatase-like GO:0046854 CDA09_14990 294c86b4ac1678c173580dbdba424cc9 268 PRINTS PR00377 Inositol monophosphatase superfamily signature 82 98 3.5E-61 T 01-11-2018 IPR000760 Inositol monophosphatase-like GO:0046854 CDA09_14990 294c86b4ac1678c173580dbdba424cc9 268 Gene3D G3DSA:3.40.190.80 142 266 8.1E-36 T 01-11-2018 CDA09_14990 294c86b4ac1678c173580dbdba424cc9 268 PRINTS PR01959 SuhB family inositol monophosphatase signature 199 211 4.9E-27 T 01-11-2018 IPR022337 Inositol monophosphatase, SuhB GO:0008934|GO:0046855 KEGG: 00521+3.1.3.25|KEGG: 00562+3.1.3.25|KEGG: 04070+3.1.3.25|MetaCyc: PWY-2301|MetaCyc: PWY-4702|MetaCyc: PWY-6363 CDA09_14990 294c86b4ac1678c173580dbdba424cc9 268 PRINTS PR01959 SuhB family inositol monophosphatase signature 105 124 4.9E-27 T 01-11-2018 IPR022337 Inositol monophosphatase, SuhB GO:0008934|GO:0046855 KEGG: 00521+3.1.3.25|KEGG: 00562+3.1.3.25|KEGG: 04070+3.1.3.25|MetaCyc: PWY-2301|MetaCyc: PWY-4702|MetaCyc: PWY-6363 CDA09_14990 294c86b4ac1678c173580dbdba424cc9 268 PRINTS PR01959 SuhB family inositol monophosphatase signature 157 183 4.9E-27 T 01-11-2018 IPR022337 Inositol monophosphatase, SuhB GO:0008934|GO:0046855 KEGG: 00521+3.1.3.25|KEGG: 00562+3.1.3.25|KEGG: 04070+3.1.3.25|MetaCyc: PWY-2301|MetaCyc: PWY-4702|MetaCyc: PWY-6363 CDA09_14990 294c86b4ac1678c173580dbdba424cc9 268 PRINTS PR01959 SuhB family inositol monophosphatase signature 17 39 4.9E-27 T 01-11-2018 IPR022337 Inositol monophosphatase, SuhB GO:0008934|GO:0046855 KEGG: 00521+3.1.3.25|KEGG: 00562+3.1.3.25|KEGG: 04070+3.1.3.25|MetaCyc: PWY-2301|MetaCyc: PWY-4702|MetaCyc: PWY-6363 CDA09_06895 649eb4cb0b754a1f094406f398f251f4 602 SUPERFAMILY SSF55073 444 597 9.42E-44 T 01-11-2018 IPR029787 Nucleotide cyclase CDA09_06895 649eb4cb0b754a1f094406f398f251f4 602 Pfam PF00990 Diguanylate cyclase, GGDEF domain 440 595 1.5E-42 T 01-11-2018 IPR000160 GGDEF domain CDA09_06895 649eb4cb0b754a1f094406f398f251f4 602 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 440 598 3.3E-43 T 01-11-2018 IPR000160 GGDEF domain CDA09_06895 649eb4cb0b754a1f094406f398f251f4 602 SMART SM00267 428 599 4.0E-53 T 01-11-2018 IPR000160 GGDEF domain CDA09_06895 649eb4cb0b754a1f094406f398f251f4 602 Gene3D G3DSA:3.30.70.270 425 598 6.2E-51 T 01-11-2018 CDA09_08535 2abc3a4da83d5d05f520199726f1c3be 343 SUPERFAMILY SSF46689 229 280 1.16E-9 T 01-11-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 CDA09_08535 2abc3a4da83d5d05f520199726f1c3be 343 SMART SM00342 246 329 3.5E-26 T 01-11-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 CDA09_08535 2abc3a4da83d5d05f520199726f1c3be 343 Gene3D G3DSA:1.10.10.60 225 335 5.6E-34 T 01-11-2018 CDA09_08535 2abc3a4da83d5d05f520199726f1c3be 343 SUPERFAMILY SSF46689 282 332 1.03E-10 T 01-11-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 CDA09_08535 2abc3a4da83d5d05f520199726f1c3be 343 SUPERFAMILY SSF52317 21 210 1.13E-37 T 01-11-2018 IPR029062 Class I glutamine amidotransferase-like CDA09_08535 2abc3a4da83d5d05f520199726f1c3be 343 Pfam PF12833 Helix-turn-helix domain 252 331 1.9E-23 T 01-11-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 CDA09_08535 2abc3a4da83d5d05f520199726f1c3be 343 Gene3D G3DSA:3.40.50.880 18 219 6.5E-48 T 01-11-2018 IPR029062 Class I glutamine amidotransferase-like CDA09_08535 2abc3a4da83d5d05f520199726f1c3be 343 Pfam PF01965 DJ-1/PfpI family 53 152 8.3E-8 T 01-11-2018 IPR002818 DJ-1/PfpI Reactome: R-HSA-3899300 CDA09_19940 fff75aab92a5efa953c6506674baa1a3 226 SMART SM00448 9 121 4.5E-8 T 01-11-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 CDA09_19940 fff75aab92a5efa953c6506674baa1a3 226 SUPERFAMILY SSF52172 9 136 1.32E-17 T 01-11-2018 IPR011006 CheY-like superfamily CDA09_19940 fff75aab92a5efa953c6506674baa1a3 226 Pfam PF00196 Bacterial regulatory proteins, luxR family 159 216 4.0E-11 T 01-11-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 CDA09_19940 fff75aab92a5efa953c6506674baa1a3 226 SMART SM00421 157 216 5.3E-10 T 01-11-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 CDA09_19940 fff75aab92a5efa953c6506674baa1a3 226 Pfam PF00072 Response regulator receiver domain 11 121 4.8E-11 T 01-11-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 CDA09_19940 fff75aab92a5efa953c6506674baa1a3 226 Gene3D G3DSA:3.40.50.12740 9 221 8.7E-37 T 01-11-2018 CDA09_19940 fff75aab92a5efa953c6506674baa1a3 226 SUPERFAMILY SSF46894 150 221 4.76E-14 T 01-11-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 CDA09_18785 bfd3c491c2968d7aee75a919adb70d38 386 Pfam PF01170 Putative RNA methylase family UPF0020 163 367 4.1E-53 T 01-11-2018 IPR000241 Putative RNA methylase domain CDA09_18785 bfd3c491c2968d7aee75a919adb70d38 386 ProSitePatterns PS01261 Uncharacterized protein family UPF0020 signature. 196 207 - T 01-11-2018 IPR000241 Putative RNA methylase domain CDA09_18785 bfd3c491c2968d7aee75a919adb70d38 386 Pfam PF02926 THUMP domain 34 155 1.6E-10 T 01-11-2018 IPR004114 THUMP domain GO:0003723 CDA09_18785 bfd3c491c2968d7aee75a919adb70d38 386 Gene3D G3DSA:3.30.2130.30 6 252 6.0E-134 T 01-11-2018 CDA09_18785 bfd3c491c2968d7aee75a919adb70d38 386 Gene3D G3DSA:3.40.50.150 170 366 6.0E-134 T 01-11-2018 CDA09_18785 bfd3c491c2968d7aee75a919adb70d38 386 SUPERFAMILY SSF53335 145 369 2.62E-45 T 01-11-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase CDA09_18785 bfd3c491c2968d7aee75a919adb70d38 386 ProSitePatterns PS00092 N-6 Adenine-specific DNA methylases signature. 300 306 - T 01-11-2018 IPR002052 DNA methylase, N-6 adenine-specific, conserved site GO:0003676|GO:0008168|GO:0032259 CDA09_18785 bfd3c491c2968d7aee75a919adb70d38 386 PRINTS PR00507 N12 class N6 adenine-specific DNA methyltransferase signature 297 309 7.5E-5 T 01-11-2018 CDA09_18785 bfd3c491c2968d7aee75a919adb70d38 386 PRINTS PR00507 N12 class N6 adenine-specific DNA methyltransferase signature 194 208 7.5E-5 T 01-11-2018 CDA09_18785 bfd3c491c2968d7aee75a919adb70d38 386 SMART SM00981 57 155 4.4E-20 T 01-11-2018 IPR004114 THUMP domain GO:0003723 CDA09_16365 75d00574ded84f83e052886ab46bac78 460 Gene3D G3DSA:1.20.120.640 309 460 6.1E-43 T 01-11-2018 CDA09_16365 75d00574ded84f83e052886ab46bac78 460 Hamap MF_00041 Cysteine--tRNA ligase [cysS]. 2 460 38.982 T 01-11-2018 IPR015803 Cysteine-tRNA ligase GO:0004817|GO:0005524|GO:0006423 KEGG: 00970+6.1.1.16 CDA09_16365 75d00574ded84f83e052886ab46bac78 460 Pfam PF09190 DALR domain 345 400 4.0E-18 T 01-11-2018 IPR015273 Cysteinyl-tRNA synthetase, class Ia, DALR GO:0000166|GO:0004817|GO:0005524|GO:0005737|GO:0006423 KEGG: 00970+6.1.1.16 CDA09_16365 75d00574ded84f83e052886ab46bac78 460 PRINTS PR00983 Cysteinyl-tRNA synthetase signature 25 36 2.8E-29 T 01-11-2018 IPR024909 Cysteinyl-tRNA synthetase/mycothiol ligase KEGG: 00970+6.1.1.16 CDA09_16365 75d00574ded84f83e052886ab46bac78 460 PRINTS PR00983 Cysteinyl-tRNA synthetase signature 61 70 2.8E-29 T 01-11-2018 IPR024909 Cysteinyl-tRNA synthetase/mycothiol ligase KEGG: 00970+6.1.1.16 CDA09_16365 75d00574ded84f83e052886ab46bac78 460 PRINTS PR00983 Cysteinyl-tRNA synthetase signature 194 212 2.8E-29 T 01-11-2018 IPR024909 Cysteinyl-tRNA synthetase/mycothiol ligase KEGG: 00970+6.1.1.16 CDA09_16365 75d00574ded84f83e052886ab46bac78 460 PRINTS PR00983 Cysteinyl-tRNA synthetase signature 225 246 2.8E-29 T 01-11-2018 IPR024909 Cysteinyl-tRNA synthetase/mycothiol ligase KEGG: 00970+6.1.1.16 CDA09_16365 75d00574ded84f83e052886ab46bac78 460 Pfam PF01406 tRNA synthetases class I (C) catalytic domain 15 316 5.2E-129 T 01-11-2018 IPR032678 tRNA synthetases class I, catalytic domain KEGG: 00970+6.1.1.16 CDA09_16365 75d00574ded84f83e052886ab46bac78 460 TIGRFAM TIGR00435 cysS: cysteine--tRNA ligase 2 459 2.2E-171 T 01-11-2018 IPR015803 Cysteine-tRNA ligase GO:0004817|GO:0005524|GO:0006423 KEGG: 00970+6.1.1.16 CDA09_16365 75d00574ded84f83e052886ab46bac78 460 Gene3D G3DSA:3.40.50.620 1 308 4.2E-134 T 01-11-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold CDA09_16365 75d00574ded84f83e052886ab46bac78 460 SMART SM00840 345 400 2.4E-24 T 01-11-2018 IPR015273 Cysteinyl-tRNA synthetase, class Ia, DALR GO:0000166|GO:0004817|GO:0005524|GO:0005737|GO:0006423 KEGG: 00970+6.1.1.16 CDA09_16365 75d00574ded84f83e052886ab46bac78 460 SUPERFAMILY SSF47323 319 459 3.4E-37 T 01-11-2018 IPR009080 Aminoacyl-tRNA synthetase, class Ia, anticodon-binding GO:0000166|GO:0004812|GO:0005524|GO:0006418 CDA09_16365 75d00574ded84f83e052886ab46bac78 460 SUPERFAMILY SSF52374 2 316 2.25E-101 T 01-11-2018 CDA09_08635 dfa4e77d77d427cddfde26e8c33b5d5a 437 Pfam PF00109 Beta-ketoacyl synthase, N-terminal domain 12 264 8.4E-59 T 01-11-2018 IPR014030 Beta-ketoacyl synthase, N-terminal CDA09_08635 dfa4e77d77d427cddfde26e8c33b5d5a 437 PIRSF PIRSF000447 9 437 1.2E-175 T 01-11-2018 IPR017568 3-oxoacyl-[acyl-carrier-protein] synthase 2 GO:0006633|GO:0016747 CDA09_08635 dfa4e77d77d427cddfde26e8c33b5d5a 437 Gene3D G3DSA:3.40.47.10 274 424 5.3E-50 T 01-11-2018 IPR016039 Thiolase-like GO:0003824 CDA09_08635 dfa4e77d77d427cddfde26e8c33b5d5a 437 Pfam PF02801 Beta-ketoacyl synthase, C-terminal domain 272 391 1.7E-38 T 01-11-2018 IPR014031 Beta-ketoacyl synthase, C-terminal CDA09_08635 dfa4e77d77d427cddfde26e8c33b5d5a 437 SUPERFAMILY SSF53901 232 434 1.36E-65 T 01-11-2018 IPR016039 Thiolase-like GO:0003824 CDA09_08635 dfa4e77d77d427cddfde26e8c33b5d5a 437 ProSitePatterns PS00606 Beta-ketoacyl synthases active site. 171 187 - T 01-11-2018 IPR018201 Beta-ketoacyl synthase, active site CDA09_08635 dfa4e77d77d427cddfde26e8c33b5d5a 437 Gene3D G3DSA:3.40.47.10 5 272 2.2E-83 T 01-11-2018 IPR016039 Thiolase-like GO:0003824 CDA09_08635 dfa4e77d77d427cddfde26e8c33b5d5a 437 TIGRFAM TIGR03150 fabF: beta-ketoacyl-acyl-carrier-protein synthase II 12 432 2.8E-172 T 01-11-2018 IPR017568 3-oxoacyl-[acyl-carrier-protein] synthase 2 GO:0006633|GO:0016747 CDA09_08635 dfa4e77d77d427cddfde26e8c33b5d5a 437 SUPERFAMILY SSF53901 12 271 3.94E-72 T 01-11-2018 IPR016039 Thiolase-like GO:0003824 CDA09_08635 dfa4e77d77d427cddfde26e8c33b5d5a 437 SMART SM00825 Beta-ketoacyl synthase 14 437 3.6E-16 T 01-11-2018 IPR020841 Polyketide synthase, beta-ketoacyl synthase domain CDA09_05435 637665b6248eb6b513e37df067fbee72 508 Pfam PF05235 CHAD domain 229 457 8.6E-49 T 01-11-2018 IPR007899 CHAD domain CDA09_05435 637665b6248eb6b513e37df067fbee72 508 Gene3D G3DSA:2.40.320.10 2 197 6.3E-26 T 01-11-2018 CDA09_05435 637665b6248eb6b513e37df067fbee72 508 Pfam PF01928 CYTH domain 3 195 4.1E-26 T 01-11-2018 IPR023577 CYTH domain Reactome: R-HSA-196819 CDA09_05435 637665b6248eb6b513e37df067fbee72 508 SUPERFAMILY SSF55154 2 215 6.87E-40 T 01-11-2018 IPR033469 CYTH-like domain superfamily Reactome: R-HSA-196819 CDA09_05435 637665b6248eb6b513e37df067fbee72 508 Gene3D G3DSA:1.40.20.10 208 496 5.8E-60 T 01-11-2018 IPR038186 CHAD domain superfamily CDA09_05435 637665b6248eb6b513e37df067fbee72 508 SMART SM00880 226 492 4.0E-62 T 01-11-2018 IPR007899 CHAD domain CDA09_05435 637665b6248eb6b513e37df067fbee72 508 SMART SM01118 2 201 1.9E-35 T 01-11-2018 IPR023577 CYTH domain Reactome: R-HSA-196819 CDA09_01480 0819f02b51525face25c0820a0ea4096 333 Pfam PF13442 Cytochrome C oxidase, cbb3-type, subunit III 33 114 1.3E-8 T 01-11-2018 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 Reactome: R-HSA-111457|Reactome: R-HSA-111458|Reactome: R-HSA-111459|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 CDA09_01480 0819f02b51525face25c0820a0ea4096 333 Pfam PF13442 Cytochrome C oxidase, cbb3-type, subunit III 243 324 9.5E-14 T 01-11-2018 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 Reactome: R-HSA-111457|Reactome: R-HSA-111458|Reactome: R-HSA-111459|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 CDA09_01480 0819f02b51525face25c0820a0ea4096 333 Gene3D G3DSA:1.10.760.10 21 128 5.5E-14 T 01-11-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 CDA09_01480 0819f02b51525face25c0820a0ea4096 333 SUPERFAMILY SSF48695 25 220 1.13E-5 T 01-11-2018 IPR036280 Multiheme cytochrome superfamily CDA09_01480 0819f02b51525face25c0820a0ea4096 333 Gene3D G3DSA:1.10.760.10 218 328 1.2E-20 T 01-11-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 CDA09_01480 0819f02b51525face25c0820a0ea4096 333 SUPERFAMILY SSF46626 154 198 2.96E-6 T 01-11-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 CDA09_01480 0819f02b51525face25c0820a0ea4096 333 PRINTS PR00605 Class IC cytochrome C signature 251 262 2.3E-6 T 01-11-2018 IPR008168 Cytochrome c, class IC GO:0005506|GO:0009055 CDA09_01480 0819f02b51525face25c0820a0ea4096 333 PRINTS PR00605 Class IC cytochrome C signature 302 324 2.3E-6 T 01-11-2018 IPR008168 Cytochrome c, class IC GO:0005506|GO:0009055 CDA09_01480 0819f02b51525face25c0820a0ea4096 333 SUPERFAMILY SSF46626 6 116 5.38E-16 T 01-11-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 CDA09_01480 0819f02b51525face25c0820a0ea4096 333 SUPERFAMILY SSF46626 230 328 7.98E-19 T 01-11-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 CDA09_17720 d803795b735a9f10ed466c4ac5283427 154 ProSitePatterns PS00893 Nudix box signature. 37 58 - T 01-11-2018 IPR020084 NUDIX hydrolase, conserved site GO:0016787 CDA09_17720 d803795b735a9f10ed466c4ac5283427 154 PRINTS PR01404 DATP pyrophosphohydrolase signature 125 138 4.0E-11 T 01-11-2018 IPR003564 Dihydroneopterin triphosphate diphosphatase GO:0008828|GO:0019177|GO:0046656 KEGG: 00790+3.6.1.67|MetaCyc: PWY-6147 CDA09_17720 d803795b735a9f10ed466c4ac5283427 154 PRINTS PR01404 DATP pyrophosphohydrolase signature 68 87 4.0E-11 T 01-11-2018 IPR003564 Dihydroneopterin triphosphate diphosphatase GO:0008828|GO:0019177|GO:0046656 KEGG: 00790+3.6.1.67|MetaCyc: PWY-6147 CDA09_17720 d803795b735a9f10ed466c4ac5283427 154 PRINTS PR01404 DATP pyrophosphohydrolase signature 19 40 4.0E-11 T 01-11-2018 IPR003564 Dihydroneopterin triphosphate diphosphatase GO:0008828|GO:0019177|GO:0046656 KEGG: 00790+3.6.1.67|MetaCyc: PWY-6147 CDA09_17720 d803795b735a9f10ed466c4ac5283427 154 PRINTS PR00502 NUDIX hydrolase family signature 32 46 8.6E-6 T 01-11-2018 IPR020476 NUDIX hydrolase Reactome: R-HSA-2393930 CDA09_17720 d803795b735a9f10ed466c4ac5283427 154 PRINTS PR00502 NUDIX hydrolase family signature 46 61 8.6E-6 T 01-11-2018 IPR020476 NUDIX hydrolase Reactome: R-HSA-2393930 CDA09_17720 d803795b735a9f10ed466c4ac5283427 154 Pfam PF00293 NUDIX domain 5 136 3.9E-19 T 01-11-2018 IPR000086 NUDIX hydrolase domain GO:0016787 CDA09_17720 d803795b735a9f10ed466c4ac5283427 154 SUPERFAMILY SSF55811 3 143 8.53E-28 T 01-11-2018 IPR015797 NUDIX hydrolase-like domain superfamily GO:0016787 CDA09_17720 d803795b735a9f10ed466c4ac5283427 154 Gene3D G3DSA:3.90.79.10 1 142 3.7E-37 T 01-11-2018 CDA09_05495 ecb5c12593b27aedbd7c88d16dffe6d6 582 Gene3D G3DSA:3.90.960.10 240 398 2.4E-232 T 01-11-2018 IPR036754 YbaK/aminoacyl-tRNA synthetase-associated domain superfamily GO:0002161 KEGG: 00970+6.1.1.15 CDA09_05495 ecb5c12593b27aedbd7c88d16dffe6d6 582 SUPERFAMILY SSF55681 10 487 6.77E-102 T 01-11-2018 CDA09_05495 ecb5c12593b27aedbd7c88d16dffe6d6 582 Pfam PF00587 tRNA synthetase class II core domain (G, H, P, S and T) 95 468 5.2E-44 T 01-11-2018 IPR002314 Aminoacyl-tRNA synthetase, class II (G/ P/ S/T) GO:0000166|GO:0004812|GO:0005524|GO:0006418 CDA09_05495 ecb5c12593b27aedbd7c88d16dffe6d6 582 SUPERFAMILY SSF52954 473 579 1.24E-28 T 01-11-2018 CDA09_05495 ecb5c12593b27aedbd7c88d16dffe6d6 582 PIRSF PIRSF001535 1 582 1.2E-268 T 01-11-2018 IPR023717 Prolyl-tRNA synthetase, class IIa, type 1 GO:0004827|GO:0005524|GO:0005737|GO:0006433 KEGG: 00970+6.1.1.15 CDA09_05495 ecb5c12593b27aedbd7c88d16dffe6d6 582 SUPERFAMILY SSF55826 218 398 4.45E-32 T 01-11-2018 IPR036754 YbaK/aminoacyl-tRNA synthetase-associated domain superfamily GO:0002161 KEGG: 00970+6.1.1.15 CDA09_05495 ecb5c12593b27aedbd7c88d16dffe6d6 582 Hamap MF_01569 Proline--tRNA ligase [proS]. 1 580 40.517 T 01-11-2018 IPR023717 Prolyl-tRNA synthetase, class IIa, type 1 GO:0004827|GO:0005524|GO:0005737|GO:0006433 KEGG: 00970+6.1.1.15 CDA09_05495 ecb5c12593b27aedbd7c88d16dffe6d6 582 Gene3D G3DSA:3.40.50.800 4 563 2.4E-232 T 01-11-2018 IPR036621 Anticodon-binding domain superfamily CDA09_05495 ecb5c12593b27aedbd7c88d16dffe6d6 582 Pfam PF03129 Anticodon binding domain 485 577 2.1E-16 T 01-11-2018 IPR004154 Anticodon-binding CDA09_05495 ecb5c12593b27aedbd7c88d16dffe6d6 582 Pfam PF04073 Aminoacyl-tRNA editing domain 257 387 2.4E-28 T 01-11-2018 IPR007214 YbaK/aminoacyl-tRNA synthetase-associated domain GO:0002161 KEGG: 00970+6.1.1.15 CDA09_05495 ecb5c12593b27aedbd7c88d16dffe6d6 582 PRINTS PR01046 Prolyl-tRNA synthetase signature 104 115 4.6E-18 T 01-11-2018 IPR002316 Proline-tRNA ligase, class IIa GO:0004827|GO:0005524|GO:0005737|GO:0006433 KEGG: 00970+6.1.1.15|Reactome: R-HSA-379726 CDA09_05495 ecb5c12593b27aedbd7c88d16dffe6d6 582 PRINTS PR01046 Prolyl-tRNA synthetase signature 134 142 4.6E-18 T 01-11-2018 IPR002316 Proline-tRNA ligase, class IIa GO:0004827|GO:0005524|GO:0005737|GO:0006433 KEGG: 00970+6.1.1.15|Reactome: R-HSA-379726 CDA09_05495 ecb5c12593b27aedbd7c88d16dffe6d6 582 PRINTS PR01046 Prolyl-tRNA synthetase signature 144 155 4.6E-18 T 01-11-2018 IPR002316 Proline-tRNA ligase, class IIa GO:0004827|GO:0005524|GO:0005737|GO:0006433 KEGG: 00970+6.1.1.15|Reactome: R-HSA-379726 CDA09_05495 ecb5c12593b27aedbd7c88d16dffe6d6 582 PRINTS PR01046 Prolyl-tRNA synthetase signature 68 86 4.6E-18 T 01-11-2018 IPR002316 Proline-tRNA ligase, class IIa GO:0004827|GO:0005524|GO:0005737|GO:0006433 KEGG: 00970+6.1.1.15|Reactome: R-HSA-379726 CDA09_05495 ecb5c12593b27aedbd7c88d16dffe6d6 582 TIGRFAM TIGR00409 proS_fam_II: proline--tRNA ligase 1 574 6.6E-221 T 01-11-2018 IPR004500 Prolyl-tRNA synthetase, class IIa, bacterial-type GO:0004827|GO:0005524|GO:0005737|GO:0006433 KEGG: 00970+6.1.1.15 CDA09_05495 ecb5c12593b27aedbd7c88d16dffe6d6 582 Gene3D G3DSA:3.30.930.10 11 474 2.4E-232 T 01-11-2018 CDA09_19625 929125bd3119709e7a7c60ec3b72e3cf 251 Gene3D G3DSA:3.40.50.150 93 246 3.6E-24 T 01-11-2018 CDA09_19625 929125bd3119709e7a7c60ec3b72e3cf 251 SUPERFAMILY SSF53335 97 231 3.01E-17 T 01-11-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase CDA09_19175 7ad8367334abdc99290df4d495e5674a 81 SUPERFAMILY SSF47598 3 59 2.45E-10 T 01-11-2018 IPR010985 Ribbon-helix-helix GO:0006355 CDA09_05660 2e8fdde4366f741d1c49bc7d1af26705 668 SUPERFAMILY SSF52440 1 113 1.51E-50 T 01-11-2018 IPR016185 Pre-ATP-grasp domain superfamily CDA09_05660 2e8fdde4366f741d1c49bc7d1af26705 668 Pfam PF00364 Biotin-requiring enzyme 600 662 4.0E-13 T 01-11-2018 IPR000089 Biotin/lipoyl attachment CDA09_05660 2e8fdde4366f741d1c49bc7d1af26705 668 SUPERFAMILY SSF51230 592 664 1.44E-17 T 01-11-2018 IPR011053 Single hybrid motif CDA09_05660 2e8fdde4366f741d1c49bc7d1af26705 668 Gene3D G3DSA:2.40.50.100 599 664 8.6E-21 T 01-11-2018 CDA09_05660 2e8fdde4366f741d1c49bc7d1af26705 668 SUPERFAMILY SSF56059 83 348 3.54E-68 T 01-11-2018 CDA09_05660 2e8fdde4366f741d1c49bc7d1af26705 668 Pfam PF00289 Biotin carboxylase, N-terminal domain 1 110 3.8E-46 T 01-11-2018 IPR005481 Biotin carboxylase-like, N-terminal domain Reactome: R-HSA-196780|Reactome: R-HSA-3371599 CDA09_05660 2e8fdde4366f741d1c49bc7d1af26705 668 ProSitePatterns PS00867 Carbamoyl-phosphate synthase subdomain signature 2. 286 293 - T 01-11-2018 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 CDA09_05660 2e8fdde4366f741d1c49bc7d1af26705 668 ProSitePatterns PS00866 Carbamoyl-phosphate synthase subdomain signature 1. 153 167 - T 01-11-2018 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 CDA09_05660 2e8fdde4366f741d1c49bc7d1af26705 668 SMART SM00878 336 443 3.7E-60 T 01-11-2018 IPR005482 Biotin carboxylase, C-terminal Reactome: R-HSA-196780|Reactome: R-HSA-3371599 CDA09_05660 2e8fdde4366f741d1c49bc7d1af26705 668 Gene3D G3DSA:3.30.470.130 1 444 6.9E-205 T 01-11-2018 CDA09_05660 2e8fdde4366f741d1c49bc7d1af26705 668 Pfam PF02785 Biotin carboxylase C-terminal domain 336 444 1.4E-38 T 01-11-2018 IPR005482 Biotin carboxylase, C-terminal Reactome: R-HSA-196780|Reactome: R-HSA-3371599 CDA09_05660 2e8fdde4366f741d1c49bc7d1af26705 668 Pfam PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain 116 322 6.4E-78 T 01-11-2018 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 CDA09_05660 2e8fdde4366f741d1c49bc7d1af26705 668 Gene3D G3DSA:3.30.700.40 445 551 9.5E-6 T 01-11-2018 CDA09_05660 2e8fdde4366f741d1c49bc7d1af26705 668 SUPERFAMILY SSF51246 331 447 4.97E-41 T 01-11-2018 IPR011054 Rudiment single hybrid motif Reactome: R-HSA-196780 CDA09_19760 5d5f508c3d9f7688ed932e683e432641 115 PRINTS PR00606 Class ID cytochrome C signature 104 114 2.6E-7 T 01-11-2018 IPR002324 Cytochrome c, class ID GO:0005506|GO:0009055|GO:0020037 CDA09_19760 5d5f508c3d9f7688ed932e683e432641 115 PRINTS PR00606 Class ID cytochrome C signature 35 48 2.6E-7 T 01-11-2018 IPR002324 Cytochrome c, class ID GO:0005506|GO:0009055|GO:0020037 CDA09_19760 5d5f508c3d9f7688ed932e683e432641 115 PRINTS PR00606 Class ID cytochrome C signature 50 63 2.6E-7 T 01-11-2018 IPR002324 Cytochrome c, class ID GO:0005506|GO:0009055|GO:0020037 CDA09_19760 5d5f508c3d9f7688ed932e683e432641 115 Pfam PF00034 Cytochrome c 30 114 4.6E-5 T 01-11-2018 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 Reactome: R-HSA-111457|Reactome: R-HSA-111458|Reactome: R-HSA-111459|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 CDA09_19760 5d5f508c3d9f7688ed932e683e432641 115 SUPERFAMILY SSF46626 6 114 6.92E-9 T 01-11-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 CDA09_19760 5d5f508c3d9f7688ed932e683e432641 115 Gene3D G3DSA:1.10.760.10 26 115 1.2E-26 T 01-11-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 CDA09_20385 3e23752984abcad8c0856127fc35f1e3 181 ProDom PD001462 35-EPIMERASE DTDP-4-DEHYDRORHAMNOSE ISOMERASE RMLC EPIMERASE RELATED DTDP-6-DEOXY-D-GLUCOSE-35-EPIMERASE DTDP-4-KETO-6-DEOXY-D-GLUCOSE DTDP-4-KETO-6-DEOXYGLUCOSE-35-EPIMERASE DTDP-L-RHAMNOSE 1 175 6.0E-90 T 01-11-2018 IPR000888 dTDP-4-dehydrorhamnose 3,5-epimerase-related GO:0008830 CDA09_20385 3e23752984abcad8c0856127fc35f1e3 181 Pfam PF00908 dTDP-4-dehydrorhamnose 3,5-epimerase 6 175 8.4E-76 T 01-11-2018 IPR000888 dTDP-4-dehydrorhamnose 3,5-epimerase-related GO:0008830 CDA09_20385 3e23752984abcad8c0856127fc35f1e3 181 Gene3D G3DSA:2.60.120.10 1 181 4.6E-76 T 01-11-2018 IPR014710 RmlC-like jelly roll fold CDA09_20385 3e23752984abcad8c0856127fc35f1e3 181 TIGRFAM TIGR01221 rmlC: dTDP-4-dehydrorhamnose 3,5-epimerase 4 177 1.5E-84 T 01-11-2018 IPR000888 dTDP-4-dehydrorhamnose 3,5-epimerase-related GO:0008830 CDA09_20385 3e23752984abcad8c0856127fc35f1e3 181 SUPERFAMILY SSF51182 1 178 7.12E-79 T 01-11-2018 IPR011051 RmlC-like cupin domain superfamily CDA09_03710 4ec9c9cc1b5156891f0b5c0bfd34bbba 162 SUPERFAMILY SSF55826 8 160 8.37E-37 T 01-11-2018 IPR036754 YbaK/aminoacyl-tRNA synthetase-associated domain superfamily GO:0002161 KEGG: 00970+6.1.1.15 CDA09_03710 4ec9c9cc1b5156891f0b5c0bfd34bbba 162 PIRSF PIRSF006181 6 162 1.1E-43 T 01-11-2018 IPR004369 Prolyl-tRNA editing protein, YbaK/EbsC CDA09_03710 4ec9c9cc1b5156891f0b5c0bfd34bbba 162 Pfam PF04073 Aminoacyl-tRNA editing domain 42 150 2.1E-20 T 01-11-2018 IPR007214 YbaK/aminoacyl-tRNA synthetase-associated domain GO:0002161 KEGG: 00970+6.1.1.15 CDA09_03710 4ec9c9cc1b5156891f0b5c0bfd34bbba 162 Gene3D G3DSA:3.90.960.10 4 161 2.5E-41 T 01-11-2018 IPR036754 YbaK/aminoacyl-tRNA synthetase-associated domain superfamily GO:0002161 KEGG: 00970+6.1.1.15 CDA09_03710 4ec9c9cc1b5156891f0b5c0bfd34bbba 162 TIGRFAM TIGR00011 YbaK_EbsC: Cys-tRNA(Pro) deacylase 11 159 6.7E-46 T 01-11-2018 IPR004369 Prolyl-tRNA editing protein, YbaK/EbsC CDA09_17570 534b73dffce0fb0738d2aed98f1165b0 354 SUPERFAMILY SSF55021 256 350 4.58E-27 T 01-11-2018 CDA09_17570 534b73dffce0fb0738d2aed98f1165b0 354 Gene3D G3DSA:3.40.190.10 167 251 5.0E-58 T 01-11-2018 CDA09_17570 534b73dffce0fb0738d2aed98f1165b0 354 PIRSF PIRSF001500 1 354 1.8E-139 T 01-11-2018 IPR008242 Bifunctional P-protein, chorismate mutase/prephenate dehydratase GO:0004106|GO:0004664|GO:0005737|GO:0009094 KEGG: 00400+4.2.1.51|MetaCyc: PWY-7432 CDA09_17570 534b73dffce0fb0738d2aed98f1165b0 354 SMART SM00830 9 85 9.9E-27 T 01-11-2018 IPR002701 Chorismate mutase II, prokaryotic-type GO:0046417 KEGG: 00400+5.4.99.5|MetaCyc: PWY-3461|MetaCyc: PWY-3462|MetaCyc: PWY-6120|MetaCyc: PWY-6627|MetaCyc: PWY-7626 CDA09_17570 534b73dffce0fb0738d2aed98f1165b0 354 Pfam PF00800 Prephenate dehydratase 87 262 9.1E-61 T 01-11-2018 IPR001086 Prephenate dehydratase GO:0004664|GO:0009094 KEGG: 00400+4.2.1.51|MetaCyc: PWY-7432 CDA09_17570 534b73dffce0fb0738d2aed98f1165b0 354 SUPERFAMILY SSF48600 3 88 2.56E-20 T 01-11-2018 IPR036263 Chorismate mutase type II superfamily GO:0046417 KEGG: 00400+5.4.99.5|MetaCyc: PWY-3461|MetaCyc: PWY-3462|MetaCyc: PWY-6120|MetaCyc: PWY-6627|MetaCyc: PWY-7626 CDA09_17570 534b73dffce0fb0738d2aed98f1165b0 354 Gene3D G3DSA:3.40.190.10 89 259 5.0E-58 T 01-11-2018 CDA09_17570 534b73dffce0fb0738d2aed98f1165b0 354 Pfam PF01842 ACT domain 273 336 2.6E-9 T 01-11-2018 IPR002912 ACT domain CDA09_17570 534b73dffce0fb0738d2aed98f1165b0 354 TIGRFAM TIGR01807 CM_P2: chorismate mutase 5 75 8.6E-26 T 01-11-2018 IPR010957 Gamma/beta/epsilon proteobacterial P-protein, chorismate mutase domain GO:0004106|GO:0005737|GO:0009094 KEGG: 00400+5.4.99.5+4.2.1.51|MetaCyc: PWY-3461|MetaCyc: PWY-3462|MetaCyc: PWY-6120|MetaCyc: PWY-6627|MetaCyc: PWY-7432|MetaCyc: PWY-7626 CDA09_17570 534b73dffce0fb0738d2aed98f1165b0 354 ProSitePatterns PS00857 Prephenate dehydratase signature 1. 237 259 - T 01-11-2018 IPR018528 Prephenate dehydratase, conserved site GO:0004664|GO:0009094 KEGG: 00400+4.2.1.51|MetaCyc: PWY-7432 CDA09_17570 534b73dffce0fb0738d2aed98f1165b0 354 Gene3D G3DSA:3.30.70.260 264 354 1.1E-28 T 01-11-2018 CDA09_17570 534b73dffce0fb0738d2aed98f1165b0 354 Gene3D G3DSA:1.20.59.10 1 86 9.8E-27 T 01-11-2018 IPR036979 Chorismate mutase domain superfamily GO:0046417 KEGG: 00400+5.4.99.5|MetaCyc: PWY-3461|MetaCyc: PWY-3462|MetaCyc: PWY-6120|MetaCyc: PWY-6627|MetaCyc: PWY-7626 CDA09_17570 534b73dffce0fb0738d2aed98f1165b0 354 SUPERFAMILY SSF53850 86 268 3.47E-58 T 01-11-2018 CDA09_17570 534b73dffce0fb0738d2aed98f1165b0 354 Pfam PF01817 Chorismate mutase type II 9 83 1.3E-22 T 01-11-2018 IPR002701 Chorismate mutase II, prokaryotic-type GO:0046417 KEGG: 00400+5.4.99.5|MetaCyc: PWY-3461|MetaCyc: PWY-3462|MetaCyc: PWY-6120|MetaCyc: PWY-6627|MetaCyc: PWY-7626 CDA09_15480 d83ff1338bd4979a9d85642504f10a4a 418 Gene3D G3DSA:3.50.50.60 114 238 1.7E-83 T 01-11-2018 IPR036188 FAD/NAD(P)-binding domain superfamily CDA09_15480 d83ff1338bd4979a9d85642504f10a4a 418 Gene3D G3DSA:3.50.50.60 7 308 1.7E-83 T 01-11-2018 IPR036188 FAD/NAD(P)-binding domain superfamily CDA09_15480 d83ff1338bd4979a9d85642504f10a4a 418 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 5 278 1.7E-49 T 01-11-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 CDA09_15480 d83ff1338bd4979a9d85642504f10a4a 418 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 104 113 9.9E-13 T 01-11-2018 CDA09_15480 d83ff1338bd4979a9d85642504f10a4a 418 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 146 171 9.9E-13 T 01-11-2018 CDA09_15480 d83ff1338bd4979a9d85642504f10a4a 418 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 232 246 9.9E-13 T 01-11-2018 CDA09_15480 d83ff1338bd4979a9d85642504f10a4a 418 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 271 278 9.9E-13 T 01-11-2018 CDA09_15480 d83ff1338bd4979a9d85642504f10a4a 418 SUPERFAMILY SSF51905 4 311 7.87E-40 T 01-11-2018 IPR036188 FAD/NAD(P)-binding domain superfamily CDA09_15480 d83ff1338bd4979a9d85642504f10a4a 418 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 256 278 6.1E-16 T 01-11-2018 CDA09_15480 d83ff1338bd4979a9d85642504f10a4a 418 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 146 164 6.1E-16 T 01-11-2018 CDA09_15480 d83ff1338bd4979a9d85642504f10a4a 418 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 101 119 6.1E-16 T 01-11-2018 CDA09_15480 d83ff1338bd4979a9d85642504f10a4a 418 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 231 247 6.1E-16 T 01-11-2018 CDA09_16605 c66e062be7cfbc02f595ae739680a55f 265 Pfam PF13525 Outer membrane lipoprotein 35 237 2.5E-66 T 01-11-2018 IPR039565 Outer membrane lipoprotein BamD-like CDA09_16605 c66e062be7cfbc02f595ae739680a55f 265 Gene3D G3DSA:1.25.40.10 34 253 1.1E-59 T 01-11-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 CDA09_16605 c66e062be7cfbc02f595ae739680a55f 265 SUPERFAMILY SSF48452 34 114 3.8E-9 T 01-11-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 CDA09_16605 c66e062be7cfbc02f595ae739680a55f 265 TIGRFAM TIGR03302 OM_YfiO: outer membrane assembly lipoprotein YfiO 8 251 7.1E-91 T 01-11-2018 IPR017689 Outer membrane protein assembly factor BamD CDA09_16605 c66e062be7cfbc02f595ae739680a55f 265 Hamap MF_00922 Outer membrane protein assembly factor BamD [bamD]. 3 245 38.081 T 01-11-2018 IPR017689 Outer membrane protein assembly factor BamD CDA09_13420 5142bf576fb1785f3f8b9048da3582e0 255 Gene3D G3DSA:3.90.550.10 5 235 4.1E-23 T 01-11-2018 IPR029044 Nucleotide-diphospho-sugar transferases CDA09_13420 5142bf576fb1785f3f8b9048da3582e0 255 SUPERFAMILY SSF53448 10 243 7.5E-30 T 01-11-2018 IPR029044 Nucleotide-diphospho-sugar transferases CDA09_13420 5142bf576fb1785f3f8b9048da3582e0 255 Pfam PF00535 Glycosyl transferase family 2 10 139 6.0E-22 T 01-11-2018 IPR001173 Glycosyltransferase 2-like Reactome: R-HSA-913709 CDA09_08195 ff150d1ca53fbad9e1f9784d226c82c5 299 Gene3D G3DSA:1.10.10.10 1 85 2.2E-33 T 01-11-2018 IPR036388 Winged helix-like DNA-binding domain superfamily CDA09_08195 ff150d1ca53fbad9e1f9784d226c82c5 299 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 3 62 2.2E-24 T 01-11-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 CDA09_08195 ff150d1ca53fbad9e1f9784d226c82c5 299 SUPERFAMILY SSF53850 91 294 3.86E-35 T 01-11-2018 CDA09_08195 ff150d1ca53fbad9e1f9784d226c82c5 299 SUPERFAMILY SSF46785 1 85 3.88E-26 T 01-11-2018 IPR036390 Winged helix DNA-binding domain superfamily CDA09_08195 ff150d1ca53fbad9e1f9784d226c82c5 299 Gene3D G3DSA:3.40.190.10 165 270 4.2E-56 T 01-11-2018 CDA09_08195 ff150d1ca53fbad9e1f9784d226c82c5 299 Pfam PF03466 LysR substrate binding domain 88 292 1.2E-37 T 01-11-2018 IPR005119 LysR, substrate-binding CDA09_08195 ff150d1ca53fbad9e1f9784d226c82c5 299 Gene3D G3DSA:3.40.190.10 88 288 4.2E-56 T 01-11-2018 CDA09_08195 ff150d1ca53fbad9e1f9784d226c82c5 299 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 18 29 2.5E-10 T 01-11-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 CDA09_08195 ff150d1ca53fbad9e1f9784d226c82c5 299 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 39 50 2.5E-10 T 01-11-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 CDA09_08195 ff150d1ca53fbad9e1f9784d226c82c5 299 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 29 39 2.5E-10 T 01-11-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 CDA09_16435 b5deb69d80c9e5ac4dd3c934dd7624c5 264 SUPERFAMILY SSF55120 1 247 1.44E-88 T 01-11-2018 IPR020103 Pseudouridine synthase, catalytic domain superfamily GO:0001522|GO:0003723|GO:0009451|GO:0009982 CDA09_16435 b5deb69d80c9e5ac4dd3c934dd7624c5 264 Gene3D G3DSA:3.30.70.660 105 242 3.7E-46 T 01-11-2018 IPR020095 Pseudouridine synthase I, TruA, C-terminal GO:0003723|GO:0009982 CDA09_16435 b5deb69d80c9e5ac4dd3c934dd7624c5 264 PIRSF PIRSF001430 1 250 5.7E-71 T 01-11-2018 IPR001406 Pseudouridine synthase I, TruA GO:0001522|GO:0003723|GO:0009451|GO:0009982 CDA09_16435 b5deb69d80c9e5ac4dd3c934dd7624c5 264 TIGRFAM TIGR00071 hisT_truA: tRNA pseudouridine(38-40) synthase 2 238 4.2E-65 T 01-11-2018 IPR001406 Pseudouridine synthase I, TruA GO:0001522|GO:0003723|GO:0009451|GO:0009982 CDA09_16435 b5deb69d80c9e5ac4dd3c934dd7624c5 264 Hamap MF_00171 tRNA pseudouridine synthase A [truA]. 1 243 33.719 T 01-11-2018 IPR001406 Pseudouridine synthase I, TruA GO:0001522|GO:0003723|GO:0009451|GO:0009982 CDA09_16435 b5deb69d80c9e5ac4dd3c934dd7624c5 264 Pfam PF01416 tRNA pseudouridine synthase 142 243 1.3E-26 T 01-11-2018 IPR020097 Pseudouridine synthase I, TruA, alpha/beta domain GO:0001522|GO:0003723|GO:0009451|GO:0009982 CDA09_16435 b5deb69d80c9e5ac4dd3c934dd7624c5 264 Pfam PF01416 tRNA pseudouridine synthase 8 102 4.7E-7 T 01-11-2018 IPR020097 Pseudouridine synthase I, TruA, alpha/beta domain GO:0001522|GO:0003723|GO:0009451|GO:0009982 CDA09_16435 b5deb69d80c9e5ac4dd3c934dd7624c5 264 Gene3D G3DSA:3.30.70.580 1 104 7.7E-36 T 01-11-2018 CDA09_09070 a726b011c5208a86dba73f8e1b095a79 413 Gene3D G3DSA:3.30.1540.10 248 340 4.0E-110 T 01-11-2018 CDA09_09070 a726b011c5208a86dba73f8e1b095a79 413 Pfam PF02515 CoA-transferase family III 15 389 5.2E-104 T 01-11-2018 IPR003673 CoA-transferase family III GO:0003824 CDA09_09070 a726b011c5208a86dba73f8e1b095a79 413 SUPERFAMILY SSF89796 12 412 1.15E-110 T 01-11-2018 IPR023606 CoA-transferase family III domain superfamily CDA09_09070 a726b011c5208a86dba73f8e1b095a79 413 Gene3D G3DSA:3.40.50.10540 14 406 4.0E-110 T 01-11-2018 IPR023606 CoA-transferase family III domain superfamily CDA09_13835 88319f01b404b5de8bb2b4fa5db22ff3 381 Gene3D G3DSA:1.10.540.10 6 126 3.2E-28 T 01-11-2018 IPR037069 Acyl-CoA dehydrogenase/oxidase, N-terminal domain superfamily GO:0016627|GO:0050660|GO:0055114 CDA09_13835 88319f01b404b5de8bb2b4fa5db22ff3 381 Pfam PF02770 Acyl-CoA dehydrogenase, middle domain 129 221 6.3E-23 T 01-11-2018 IPR006091 Acyl-CoA oxidase/dehydrogenase, central domain GO:0016627|GO:0055114 CDA09_13835 88319f01b404b5de8bb2b4fa5db22ff3 381 Gene3D G3DSA:2.40.110.10 128 238 4.5E-36 T 01-11-2018 CDA09_13835 88319f01b404b5de8bb2b4fa5db22ff3 381 Pfam PF02771 Acyl-CoA dehydrogenase, N-terminal domain 13 125 3.0E-22 T 01-11-2018 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal GO:0016627|GO:0050660|GO:0055114 CDA09_13835 88319f01b404b5de8bb2b4fa5db22ff3 381 SUPERFAMILY SSF56645 11 245 1.06E-66 T 01-11-2018 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain superfamily GO:0016627|GO:0055114 CDA09_13835 88319f01b404b5de8bb2b4fa5db22ff3 381 Gene3D G3DSA:1.20.140.10 239 381 2.0E-9 T 01-11-2018 CDA09_13835 88319f01b404b5de8bb2b4fa5db22ff3 381 ProSitePatterns PS00072 Acyl-CoA dehydrogenases signature 1. 131 143 - T 01-11-2018 IPR006089 Acyl-CoA dehydrogenase, conserved site GO:0003995|GO:0055114 CDA09_05695 de25c185d8e5d4bc0765afd5b542f312 104 SUPERFAMILY SSF63592 1 95 7.19E-27 T 01-11-2018 IPR036194 Flagellar transcriptional activator FlhD superfamily CDA09_05695 de25c185d8e5d4bc0765afd5b542f312 104 Pfam PF05247 Flagellar transcriptional activator (FlhD) 1 99 1.6E-36 T 01-11-2018 IPR023559 Flagellar transcriptional activator FlhD GO:0044780|GO:0045893 CDA09_05695 de25c185d8e5d4bc0765afd5b542f312 104 Gene3D G3DSA:1.10.4000.10 1 104 1.1E-31 T 01-11-2018 IPR036194 Flagellar transcriptional activator FlhD superfamily CDA09_05695 de25c185d8e5d4bc0765afd5b542f312 104 Hamap MF_00725 Flagellar transcriptional regulator FlhD [flhD]. 1 102 19.089 T 01-11-2018 IPR023559 Flagellar transcriptional activator FlhD GO:0044780|GO:0045893 CDA09_05695 de25c185d8e5d4bc0765afd5b542f312 104 ProDom PD015582 ACTIVATOR TRANSCRIPTIONAL TRANSCRIPTION FLAGELLUM FLHD FLAGELLAR DNA-BINDING REGULATION REGULATOR PROBABLE 10 62 1.0E-12 T 01-11-2018 IPR023559 Flagellar transcriptional activator FlhD GO:0044780|GO:0045893 CDA09_13205 13e0273b25292e9423b66e711af84395 236 TIGRFAM TIGR00384 dhsB: succinate dehydrogenase and fumarate reductase iron-sulfur protein 11 228 9.6E-86 T 01-11-2018 IPR004489 Succinate dehydrogenase/fumarate reductase iron-sulphur protein GO:0006099|GO:0016491|GO:0055114 KEGG: 00020+1.3.5.1|KEGG: 00190+1.3.5.1|KEGG: 00650+1.3.5.1|KEGG: 00720+1.3.5.1|MetaCyc: PWY-3781|MetaCyc: PWY-4302|MetaCyc: PWY-561|MetaCyc: PWY-5690|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7254|MetaCyc: PWY-7279|Reactome: R-HSA-611105|Reactome: R-HSA-71403 CDA09_13205 13e0273b25292e9423b66e711af84395 236 Gene3D G3DSA:1.10.1060.10 106 236 2.2E-56 T 01-11-2018 IPR009051 Alpha-helical ferredoxin GO:0051536 CDA09_13205 13e0273b25292e9423b66e711af84395 236 Pfam PF13534 4Fe-4S dicluster domain 146 219 1.0E-9 T 01-11-2018 CDA09_13205 13e0273b25292e9423b66e711af84395 236 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 147 158 - T 01-11-2018 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site CDA09_13205 13e0273b25292e9423b66e711af84395 236 Gene3D G3DSA:3.10.20.30 1 105 1.3E-35 T 01-11-2018 IPR012675 Beta-grasp domain superfamily CDA09_13205 13e0273b25292e9423b66e711af84395 236 SUPERFAMILY SSF46548 106 233 1.34E-37 T 01-11-2018 IPR009051 Alpha-helical ferredoxin GO:0051536 CDA09_13205 13e0273b25292e9423b66e711af84395 236 Pfam PF13085 2Fe-2S iron-sulfur cluster binding domain 8 110 2.2E-32 T 01-11-2018 IPR025192 Succinate dehydogenase/fumarate reductase N-terminal GO:0009055|GO:0051536 KEGG: 00020+1.3.5.1|KEGG: 00190+1.3.5.1|KEGG: 00650+1.3.5.1|KEGG: 00720+1.3.5.1|MetaCyc: PWY-3781|MetaCyc: PWY-4302|MetaCyc: PWY-561|MetaCyc: PWY-5690|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7254|MetaCyc: PWY-7279|Reactome: R-HSA-611105|Reactome: R-HSA-71403 CDA09_13205 13e0273b25292e9423b66e711af84395 236 SUPERFAMILY SSF54292 1 105 5.68E-28 T 01-11-2018 IPR036010 2Fe-2S ferredoxin-like superfamily GO:0009055|GO:0051536 CDA09_16355 074c2cccf700e20fd7b9e0622cc74668 643 Hamap MF_00332 Chaperone protein DnaK [dnaK]. 1 639 37.303 T 01-11-2018 IPR012725 Chaperone DnaK GO:0005524|GO:0006457|GO:0051082 Reactome: R-HSA-1268020|Reactome: R-HSA-3371453|Reactome: R-HSA-8949613|Reactome: R-HSA-8950505 CDA09_16355 074c2cccf700e20fd7b9e0622cc74668 643 SUPERFAMILY SSF100920 384 540 5.89E-63 T 01-11-2018 IPR029047 Heat shock protein 70kD, peptide-binding domain superfamily Reactome: R-HSA-3371453 CDA09_16355 074c2cccf700e20fd7b9e0622cc74668 643 TIGRFAM TIGR02350 prok_dnaK: chaperone protein DnaK 3 603 2.0E-295 T 01-11-2018 IPR012725 Chaperone DnaK GO:0005524|GO:0006457|GO:0051082 Reactome: R-HSA-1268020|Reactome: R-HSA-3371453|Reactome: R-HSA-8949613|Reactome: R-HSA-8950505 CDA09_16355 074c2cccf700e20fd7b9e0622cc74668 643 Gene3D G3DSA:1.20.1270.10 524 607 8.0E-27 T 01-11-2018 IPR029048 Heat shock protein 70kD, C-terminal domain superfamily Reactome: R-HSA-3371453 CDA09_16355 074c2cccf700e20fd7b9e0622cc74668 643 PRINTS PR00301 70kDa heat shock protein signature 3 16 7.1E-79 T 01-11-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 CDA09_16355 074c2cccf700e20fd7b9e0622cc74668 643 PRINTS PR00301 70kDa heat shock protein signature 334 350 7.1E-79 T 01-11-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 CDA09_16355 074c2cccf700e20fd7b9e0622cc74668 643 PRINTS PR00301 70kDa heat shock protein signature 198 208 7.1E-79 T 01-11-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 CDA09_16355 074c2cccf700e20fd7b9e0622cc74668 643 PRINTS PR00301 70kDa heat shock protein signature 469 485 7.1E-79 T 01-11-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 CDA09_16355 074c2cccf700e20fd7b9e0622cc74668 643 PRINTS PR00301 70kDa heat shock protein signature 31 43 7.1E-79 T 01-11-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 CDA09_16355 074c2cccf700e20fd7b9e0622cc74668 643 PRINTS PR00301 70kDa heat shock protein signature 54 62 7.1E-79 T 01-11-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 CDA09_16355 074c2cccf700e20fd7b9e0622cc74668 643 PRINTS PR00301 70kDa heat shock protein signature 138 158 7.1E-79 T 01-11-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 CDA09_16355 074c2cccf700e20fd7b9e0622cc74668 643 PRINTS PR00301 70kDa heat shock protein signature 388 407 7.1E-79 T 01-11-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 CDA09_16355 074c2cccf700e20fd7b9e0622cc74668 643 PRINTS PR00301 70kDa heat shock protein signature 365 385 7.1E-79 T 01-11-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 CDA09_16355 074c2cccf700e20fd7b9e0622cc74668 643 ProSitePatterns PS00329 Heat shock hsp70 proteins family signature 2. 192 205 - T 01-11-2018 IPR018181 Heat shock protein 70, conserved site Reactome: R-HSA-3371453 CDA09_16355 074c2cccf700e20fd7b9e0622cc74668 643 SUPERFAMILY SSF100934 507 605 5.69E-20 T 01-11-2018 IPR029048 Heat shock protein 70kD, C-terminal domain superfamily Reactome: R-HSA-3371453 CDA09_16355 074c2cccf700e20fd7b9e0622cc74668 643 Gene3D G3DSA:3.30.420.40 180 366 1.1E-165 T 01-11-2018 CDA09_16355 074c2cccf700e20fd7b9e0622cc74668 643 Gene3D G3DSA:3.90.640.10 229 316 1.1E-165 T 01-11-2018 CDA09_16355 074c2cccf700e20fd7b9e0622cc74668 643 Gene3D G3DSA:3.30.420.40 5 379 1.1E-165 T 01-11-2018 CDA09_16355 074c2cccf700e20fd7b9e0622cc74668 643 ProSitePatterns PS00297 Heat shock hsp70 proteins family signature 1. 7 14 - T 01-11-2018 IPR018181 Heat shock protein 70, conserved site Reactome: R-HSA-3371453 CDA09_16355 074c2cccf700e20fd7b9e0622cc74668 643 ProSitePatterns PS01036 Heat shock hsp70 proteins family signature 3. 337 351 - T 01-11-2018 IPR018181 Heat shock protein 70, conserved site Reactome: R-HSA-3371453 CDA09_16355 074c2cccf700e20fd7b9e0622cc74668 643 Pfam PF00012 Hsp70 protein 4 603 1.3E-266 T 01-11-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 CDA09_16355 074c2cccf700e20fd7b9e0622cc74668 643 SUPERFAMILY SSF53067 4 184 3.72E-63 T 01-11-2018 CDA09_16355 074c2cccf700e20fd7b9e0622cc74668 643 Gene3D G3DSA:2.60.34.10 383 523 3.6E-66 T 01-11-2018 IPR029047 Heat shock protein 70kD, peptide-binding domain superfamily Reactome: R-HSA-3371453 CDA09_16355 074c2cccf700e20fd7b9e0622cc74668 643 SUPERFAMILY SSF53067 187 382 1.73E-68 T 01-11-2018 CDA09_00215 90149300782190011527339b92347d23 265 Gene3D G3DSA:3.10.129.90 18 253 2.3E-20 T 01-11-2018 CDA09_00215 90149300782190011527339b92347d23 265 SUPERFAMILY SSF54637 119 253 3.36E-10 T 01-11-2018 IPR029069 HotDog domain superfamily CDA09_00215 90149300782190011527339b92347d23 265 Pfam PF13622 Thioesterase-like superfamily 28 262 1.5E-38 T 01-11-2018 CDA09_10855 0abbe92c8ce091c8a51069f1e199f27b 1177 SUPERFAMILY SSF55874 1002 1164 1.44E-30 T 01-11-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily CDA09_10855 0abbe92c8ce091c8a51069f1e199f27b 1177 SMART SM00388 945 1013 7.5E-15 T 01-11-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 CDA09_10855 0abbe92c8ce091c8a51069f1e199f27b 1177 SMART SM00387 1054 1167 1.1E-24 T 01-11-2018 IPR003594 Histidine kinase/HSP90-like ATPase CDA09_10855 0abbe92c8ce091c8a51069f1e199f27b 1177 Gene3D G3DSA:3.30.450.20 679 800 2.1E-28 T 01-11-2018 CDA09_10855 0abbe92c8ce091c8a51069f1e199f27b 1177 Gene3D G3DSA:1.10.287.130 914 1011 2.3E-22 T 01-11-2018 CDA09_10855 0abbe92c8ce091c8a51069f1e199f27b 1177 SMART SM00086 475 518 300.0 T 01-11-2018 IPR001610 PAC motif CDA09_10855 0abbe92c8ce091c8a51069f1e199f27b 1177 SMART SM00086 747 789 7.1E-4 T 01-11-2018 IPR001610 PAC motif CDA09_10855 0abbe92c8ce091c8a51069f1e199f27b 1177 SMART SM00086 618 660 1.5E-10 T 01-11-2018 IPR001610 PAC motif CDA09_10855 0abbe92c8ce091c8a51069f1e199f27b 1177 SMART SM00086 878 918 0.51 T 01-11-2018 IPR001610 PAC motif CDA09_10855 0abbe92c8ce091c8a51069f1e199f27b 1177 SUPERFAMILY SSF55785 657 787 3.29E-20 T 01-11-2018 IPR035965 PAS domain superfamily CDA09_10855 0abbe92c8ce091c8a51069f1e199f27b 1177 Gene3D G3DSA:3.30.450.20 801 913 1.8E-27 T 01-11-2018 CDA09_10855 0abbe92c8ce091c8a51069f1e199f27b 1177 Pfam PF08448 PAS fold 411 520 2.0E-26 T 01-11-2018 IPR013656 PAS fold-4 CDA09_10855 0abbe92c8ce091c8a51069f1e199f27b 1177 Pfam PF08448 PAS fold 679 791 9.0E-14 T 01-11-2018 IPR013656 PAS fold-4 CDA09_10855 0abbe92c8ce091c8a51069f1e199f27b 1177 Gene3D G3DSA:3.30.450.20 172 299 1.1E-7 T 01-11-2018 CDA09_10855 0abbe92c8ce091c8a51069f1e199f27b 1177 Gene3D G3DSA:3.30.565.10 1014 1165 4.3E-30 T 01-11-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily CDA09_10855 0abbe92c8ce091c8a51069f1e199f27b 1177 PRINTS PR00344 Bacterial sensor protein C-terminal signature 1127 1145 1.2E-8 T 01-11-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 CDA09_10855 0abbe92c8ce091c8a51069f1e199f27b 1177 PRINTS PR00344 Bacterial sensor protein C-terminal signature 1151 1164 1.2E-8 T 01-11-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 CDA09_10855 0abbe92c8ce091c8a51069f1e199f27b 1177 PRINTS PR00344 Bacterial sensor protein C-terminal signature 1094 1108 1.2E-8 T 01-11-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 CDA09_10855 0abbe92c8ce091c8a51069f1e199f27b 1177 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 1055 1166 4.3E-16 T 01-11-2018 IPR003594 Histidine kinase/HSP90-like ATPase CDA09_10855 0abbe92c8ce091c8a51069f1e199f27b 1177 SUPERFAMILY SSF47384 928 1012 1.75E-19 T 01-11-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 CDA09_10855 0abbe92c8ce091c8a51069f1e199f27b 1177 SUPERFAMILY SSF55785 393 516 1.01E-23 T 01-11-2018 IPR035965 PAS domain superfamily CDA09_10855 0abbe92c8ce091c8a51069f1e199f27b 1177 SMART SM00091 672 738 3.3E-8 T 01-11-2018 IPR000014 PAS domain CDA09_10855 0abbe92c8ce091c8a51069f1e199f27b 1177 SMART SM00091 801 867 9.5E-11 T 01-11-2018 IPR000014 PAS domain CDA09_10855 0abbe92c8ce091c8a51069f1e199f27b 1177 SMART SM00091 530 597 1.1E-10 T 01-11-2018 IPR000014 PAS domain CDA09_10855 0abbe92c8ce091c8a51069f1e199f27b 1177 SMART SM00091 405 471 2.0E-8 T 01-11-2018 IPR000014 PAS domain CDA09_10855 0abbe92c8ce091c8a51069f1e199f27b 1177 SUPERFAMILY SSF55785 515 658 8.23E-25 T 01-11-2018 IPR035965 PAS domain superfamily CDA09_10855 0abbe92c8ce091c8a51069f1e199f27b 1177 Pfam PF13426 PAS domain 542 659 1.4E-17 T 01-11-2018 IPR000014 PAS domain CDA09_10855 0abbe92c8ce091c8a51069f1e199f27b 1177 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 669 795 1.9E-12 T 01-11-2018 IPR000014 PAS domain CDA09_10855 0abbe92c8ce091c8a51069f1e199f27b 1177 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 800 924 7.5E-27 T 01-11-2018 IPR000014 PAS domain CDA09_10855 0abbe92c8ce091c8a51069f1e199f27b 1177 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 404 525 7.5E-16 T 01-11-2018 IPR000014 PAS domain CDA09_10855 0abbe92c8ce091c8a51069f1e199f27b 1177 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 530 666 1.3E-23 T 01-11-2018 IPR000014 PAS domain CDA09_10855 0abbe92c8ce091c8a51069f1e199f27b 1177 Gene3D G3DSA:3.30.450.20 389 528 7.7E-30 T 01-11-2018 CDA09_10855 0abbe92c8ce091c8a51069f1e199f27b 1177 Pfam PF00512 His Kinase A (phospho-acceptor) domain 947 1011 5.2E-13 T 01-11-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 CDA09_10855 0abbe92c8ce091c8a51069f1e199f27b 1177 Gene3D G3DSA:3.30.450.20 529 673 3.0E-39 T 01-11-2018 CDA09_10855 0abbe92c8ce091c8a51069f1e199f27b 1177 SUPERFAMILY SSF55785 812 926 1.09E-26 T 01-11-2018 IPR035965 PAS domain superfamily CDA09_10855 0abbe92c8ce091c8a51069f1e199f27b 1177 Pfam PF00989 PAS fold 802 915 1.0E-12 T 01-11-2018 IPR013767 PAS fold GO:0006355 CDA09_04290 aefd973155b58203719be83b77954da3 437 SUPERFAMILY SSF53720 34 435 1.24E-87 T 01-11-2018 IPR016161 Aldehyde/histidinol dehydrogenase GO:0016491|GO:0055114 CDA09_04290 aefd973155b58203719be83b77954da3 437 Gene3D G3DSA:3.40.50.1980 241 357 1.2E-127 T 01-11-2018 CDA09_04290 aefd973155b58203719be83b77954da3 437 Pfam PF00815 Histidinol dehydrogenase 33 435 3.6E-164 T 01-11-2018 IPR012131 Histidinol dehydrogenase GO:0000105|GO:0004399|GO:0008270|GO:0051287|GO:0055114 KEGG: 00340+1.1.1.23 CDA09_04290 aefd973155b58203719be83b77954da3 437 ProSitePatterns PS00611 Histidinol dehydrogenase signature. 237 269 - T 01-11-2018 IPR001692 Histidinol dehydrogenase, conserved site GO:0000105|GO:0004399|GO:0055114 KEGG: 00340+1.1.1.23 CDA09_04290 aefd973155b58203719be83b77954da3 437 PRINTS PR00083 Histidinol dehydrogenase signature 208 233 1.6E-80 T 01-11-2018 IPR012131 Histidinol dehydrogenase GO:0000105|GO:0004399|GO:0008270|GO:0051287|GO:0055114 KEGG: 00340+1.1.1.23 CDA09_04290 aefd973155b58203719be83b77954da3 437 PRINTS PR00083 Histidinol dehydrogenase signature 259 278 1.6E-80 T 01-11-2018 IPR012131 Histidinol dehydrogenase GO:0000105|GO:0004399|GO:0008270|GO:0051287|GO:0055114 KEGG: 00340+1.1.1.23 CDA09_04290 aefd973155b58203719be83b77954da3 437 PRINTS PR00083 Histidinol dehydrogenase signature 40 64 1.6E-80 T 01-11-2018 IPR012131 Histidinol dehydrogenase GO:0000105|GO:0004399|GO:0008270|GO:0051287|GO:0055114 KEGG: 00340+1.1.1.23 CDA09_04290 aefd973155b58203719be83b77954da3 437 PRINTS PR00083 Histidinol dehydrogenase signature 178 204 1.6E-80 T 01-11-2018 IPR012131 Histidinol dehydrogenase GO:0000105|GO:0004399|GO:0008270|GO:0051287|GO:0055114 KEGG: 00340+1.1.1.23 CDA09_04290 aefd973155b58203719be83b77954da3 437 PRINTS PR00083 Histidinol dehydrogenase signature 237 258 1.6E-80 T 01-11-2018 IPR012131 Histidinol dehydrogenase GO:0000105|GO:0004399|GO:0008270|GO:0051287|GO:0055114 KEGG: 00340+1.1.1.23 CDA09_04290 aefd973155b58203719be83b77954da3 437 PRINTS PR00083 Histidinol dehydrogenase signature 144 170 1.6E-80 T 01-11-2018 IPR012131 Histidinol dehydrogenase GO:0000105|GO:0004399|GO:0008270|GO:0051287|GO:0055114 KEGG: 00340+1.1.1.23 CDA09_04290 aefd973155b58203719be83b77954da3 437 PRINTS PR00083 Histidinol dehydrogenase signature 328 353 1.6E-80 T 01-11-2018 IPR012131 Histidinol dehydrogenase GO:0000105|GO:0004399|GO:0008270|GO:0051287|GO:0055114 KEGG: 00340+1.1.1.23 CDA09_04290 aefd973155b58203719be83b77954da3 437 PRINTS PR00083 Histidinol dehydrogenase signature 369 387 1.6E-80 T 01-11-2018 IPR012131 Histidinol dehydrogenase GO:0000105|GO:0004399|GO:0008270|GO:0051287|GO:0055114 KEGG: 00340+1.1.1.23 CDA09_04290 aefd973155b58203719be83b77954da3 437 TIGRFAM TIGR00069 hisD: histidinol dehydrogenase 40 434 2.8E-157 T 01-11-2018 IPR012131 Histidinol dehydrogenase GO:0000105|GO:0004399|GO:0008270|GO:0051287|GO:0055114 KEGG: 00340+1.1.1.23 CDA09_04290 aefd973155b58203719be83b77954da3 437 Hamap MF_01024 Histidinol dehydrogenase [hisD]. 9 435 40.609 T 01-11-2018 IPR012131 Histidinol dehydrogenase GO:0000105|GO:0004399|GO:0008270|GO:0051287|GO:0055114 KEGG: 00340+1.1.1.23 CDA09_04290 aefd973155b58203719be83b77954da3 437 Gene3D G3DSA:3.40.50.1980 37 239 1.2E-127 T 01-11-2018 CDA09_04290 aefd973155b58203719be83b77954da3 437 PIRSF PIRSF000099 15 437 9.8E-157 T 01-11-2018 IPR022695 Histidinol dehydrogenase, monofunctional GO:0000105|GO:0004399|GO:0008270|GO:0051287|GO:0055114 KEGG: 00340+1.1.1.23 CDA09_19280 b0cb2064b44c6b3fba89dcf8902c5add 1082 SUPERFAMILY SSF82693 583 697 9.42E-11 T 01-11-2018 CDA09_19280 b0cb2064b44c6b3fba89dcf8902c5add 1082 Gene3D G3DSA:1.20.1640.10 18 527 1.1E-230 T 01-11-2018 CDA09_19280 b0cb2064b44c6b3fba89dcf8902c5add 1082 Gene3D G3DSA:1.20.1640.10 528 1066 1.1E-230 T 01-11-2018 CDA09_19280 b0cb2064b44c6b3fba89dcf8902c5add 1082 Gene3D G3DSA:3.30.2090.10 187 278 1.1E-230 T 01-11-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains CDA09_19280 b0cb2064b44c6b3fba89dcf8902c5add 1082 Gene3D G3DSA:3.30.70.1440 698 917 1.1E-230 T 01-11-2018 CDA09_19280 b0cb2064b44c6b3fba89dcf8902c5add 1082 SUPERFAMILY SSF82693 45 128 7.15E-18 T 01-11-2018 CDA09_19280 b0cb2064b44c6b3fba89dcf8902c5add 1082 Gene3D G3DSA:3.30.2090.10 746 836 1.1E-230 T 01-11-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains CDA09_19280 b0cb2064b44c6b3fba89dcf8902c5add 1082 SUPERFAMILY SSF82866 837 1071 4.71E-42 T 01-11-2018 CDA09_19280 b0cb2064b44c6b3fba89dcf8902c5add 1082 Pfam PF00873 AcrB/AcrD/AcrF family 899 1068 5.1E-31 T 01-11-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 CDA09_19280 b0cb2064b44c6b3fba89dcf8902c5add 1082 Pfam PF00873 AcrB/AcrD/AcrF family 14 854 1.1E-122 T 01-11-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 CDA09_19280 b0cb2064b44c6b3fba89dcf8902c5add 1082 PRINTS PR00702 Acriflavin resistance protein family signature 15 39 2.8E-27 T 01-11-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 CDA09_19280 b0cb2064b44c6b3fba89dcf8902c5add 1082 PRINTS PR00702 Acriflavin resistance protein family signature 406 430 2.8E-27 T 01-11-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 CDA09_19280 b0cb2064b44c6b3fba89dcf8902c5add 1082 PRINTS PR00702 Acriflavin resistance protein family signature 461 484 2.8E-27 T 01-11-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 CDA09_19280 b0cb2064b44c6b3fba89dcf8902c5add 1082 PRINTS PR00702 Acriflavin resistance protein family signature 486 509 2.8E-27 T 01-11-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 CDA09_19280 b0cb2064b44c6b3fba89dcf8902c5add 1082 PRINTS PR00702 Acriflavin resistance protein family signature 43 61 2.8E-27 T 01-11-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 CDA09_19280 b0cb2064b44c6b3fba89dcf8902c5add 1082 PRINTS PR00702 Acriflavin resistance protein family signature 378 399 2.8E-27 T 01-11-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 CDA09_19280 b0cb2064b44c6b3fba89dcf8902c5add 1082 SUPERFAMILY SSF82866 311 513 1.57E-35 T 01-11-2018 CDA09_19280 b0cb2064b44c6b3fba89dcf8902c5add 1082 SUPERFAMILY SSF82693 151 343 1.5E-8 T 01-11-2018 CDA09_19280 b0cb2064b44c6b3fba89dcf8902c5add 1082 Gene3D G3DSA:3.30.70.1320 141 346 1.1E-230 T 01-11-2018 CDA09_19280 b0cb2064b44c6b3fba89dcf8902c5add 1082 Gene3D G3DSA:3.30.70.1430 45 844 1.1E-230 T 01-11-2018 CDA09_19280 b0cb2064b44c6b3fba89dcf8902c5add 1082 SUPERFAMILY SSF82714 747 831 1.01E-10 T 01-11-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains CDA09_19280 b0cb2064b44c6b3fba89dcf8902c5add 1082 Gene3D G3DSA:3.30.70.1430 587 697 1.1E-230 T 01-11-2018 CDA09_19280 b0cb2064b44c6b3fba89dcf8902c5add 1082 SUPERFAMILY SSF82714 192 273 2.09E-16 T 01-11-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains CDA09_17540 dd55586d50a180687c0da4ce94fe9340 391 Gene3D G3DSA:1.25.40.10 138 285 3.2E-13 T 01-11-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 CDA09_17540 dd55586d50a180687c0da4ce94fe9340 391 Hamap MF_00994 Lipopolysaccharide assembly protein B [lapB]. 6 386 34.513 T 01-11-2018 IPR030865 Lipopolysaccharide assembly protein B GO:0008653 CDA09_17540 dd55586d50a180687c0da4ce94fe9340 391 SMART SM00028 214 247 25.0 T 01-11-2018 IPR019734 Tetratricopeptide repeat GO:0005515 CDA09_17540 dd55586d50a180687c0da4ce94fe9340 391 SMART SM00028 180 213 23.0 T 01-11-2018 IPR019734 Tetratricopeptide repeat GO:0005515 CDA09_17540 dd55586d50a180687c0da4ce94fe9340 391 SMART SM00028 108 141 330.0 T 01-11-2018 IPR019734 Tetratricopeptide repeat GO:0005515 CDA09_17540 dd55586d50a180687c0da4ce94fe9340 391 SMART SM00028 70 103 230.0 T 01-11-2018 IPR019734 Tetratricopeptide repeat GO:0005515 CDA09_17540 dd55586d50a180687c0da4ce94fe9340 391 SMART SM00028 36 69 95.0 T 01-11-2018 IPR019734 Tetratricopeptide repeat GO:0005515 CDA09_17540 dd55586d50a180687c0da4ce94fe9340 391 Gene3D G3DSA:1.25.40.10 31 137 9.0E-11 T 01-11-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 CDA09_17540 dd55586d50a180687c0da4ce94fe9340 391 Pfam PF13432 Tetratricopeptide repeat 185 236 3.0E-4 T 01-11-2018 CDA09_17540 dd55586d50a180687c0da4ce94fe9340 391 SUPERFAMILY SSF48452 43 247 6.57E-14 T 01-11-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 CDA09_14580 d05e9cb68acbd97d043a0c03cca98327 582 Gene3D G3DSA:1.10.8.60 406 485 9.4E-24 T 01-11-2018 CDA09_14580 d05e9cb68acbd97d043a0c03cca98327 582 Pfam PF02954 Bacterial regulatory protein, Fis family 517 558 8.3E-15 T 01-11-2018 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 CDA09_14580 d05e9cb68acbd97d043a0c03cca98327 582 Gene3D G3DSA:3.30.1380.20 33 192 3.6E-7 T 01-11-2018 CDA09_14580 d05e9cb68acbd97d043a0c03cca98327 582 ProSitePatterns PS00688 Sigma-54 interaction domain C-terminal part signature. 447 456 - T 01-11-2018 IPR025944 Sigma-54 interaction domain, conserved site CDA09_14580 d05e9cb68acbd97d043a0c03cca98327 582 ProSitePatterns PS00676 Sigma-54 interaction domain ATP-binding region B signature. 320 335 - T 01-11-2018 IPR025943 Sigma-54 interaction domain, ATP-binding site 2 CDA09_14580 d05e9cb68acbd97d043a0c03cca98327 582 ProSitePatterns PS00675 Sigma-54 interaction domain ATP-binding region A signature. 258 271 - T 01-11-2018 IPR025662 Sigma-54 interaction domain, ATP-binding site 1 CDA09_14580 d05e9cb68acbd97d043a0c03cca98327 582 SMART SM00989 125 187 7.1E-27 T 01-11-2018 IPR004096 4-vinyl reductase, 4VR CDA09_14580 d05e9cb68acbd97d043a0c03cca98327 582 SUPERFAMILY SSF52540 233 476 2.54E-71 T 01-11-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CDA09_14580 d05e9cb68acbd97d043a0c03cca98327 582 Pfam PF02830 V4R domain 126 187 7.1E-17 T 01-11-2018 IPR004096 4-vinyl reductase, 4VR CDA09_14580 d05e9cb68acbd97d043a0c03cca98327 582 SMART SM00382 254 491 8.5E-10 T 01-11-2018 IPR003593 AAA+ ATPase domain CDA09_14580 d05e9cb68acbd97d043a0c03cca98327 582 Gene3D G3DSA:1.10.10.60 511 559 2.5E-9 T 01-11-2018 CDA09_14580 d05e9cb68acbd97d043a0c03cca98327 582 SUPERFAMILY SSF111126 40 182 1.05E-9 T 01-11-2018 IPR024096 NO signalling/Golgi transport ligand-binding domain superfamily CDA09_14580 d05e9cb68acbd97d043a0c03cca98327 582 SUPERFAMILY SSF46689 447 558 2.82E-11 T 01-11-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 CDA09_14580 d05e9cb68acbd97d043a0c03cca98327 582 Pfam PF06505 Activator of aromatic catabolism 14 114 1.2E-39 T 01-11-2018 IPR010523 Activator of aromatic catabolism CDA09_14580 d05e9cb68acbd97d043a0c03cca98327 582 PRINTS PR01590 FIS bacterial regulatory protein HTH signature 524 541 2.5E-9 T 01-11-2018 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 CDA09_14580 d05e9cb68acbd97d043a0c03cca98327 582 PRINTS PR01590 FIS bacterial regulatory protein HTH signature 541 561 2.5E-9 T 01-11-2018 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 CDA09_14580 d05e9cb68acbd97d043a0c03cca98327 582 Gene3D G3DSA:3.40.50.300 221 405 7.8E-65 T 01-11-2018 CDA09_14580 d05e9cb68acbd97d043a0c03cca98327 582 ProDom PD485437 REGULATOR TRANSCRIPTIONAL FIS-TYPE HELIX-TURN-HELIX ACTIVATOR PLASMID FAMILY PHENOL-DEGRADATIVE FIS SIGMA-54 9 143 3.0E-58 T 01-11-2018 IPR010523 Activator of aromatic catabolism CDA09_14580 d05e9cb68acbd97d043a0c03cca98327 582 Pfam PF00158 Sigma-54 interaction domain 234 400 3.4E-68 T 01-11-2018 IPR002078 RNA polymerase sigma factor 54 interaction domain GO:0005524|GO:0006355|GO:0008134 CDA09_09120 eb4fa4d22120e311cbe27ab3158e2917 362 Gene3D G3DSA:3.90.180.10 6 357 8.2E-116 T 01-11-2018 CDA09_09120 eb4fa4d22120e311cbe27ab3158e2917 362 Gene3D G3DSA:3.40.50.720 166 303 8.2E-116 T 01-11-2018 CDA09_09120 eb4fa4d22120e311cbe27ab3158e2917 362 SUPERFAMILY SSF50129 2 185 2.13E-48 T 01-11-2018 IPR011032 GroES-like superfamily CDA09_09120 eb4fa4d22120e311cbe27ab3158e2917 362 SMART SM00829 15 358 2.3E-7 T 01-11-2018 IPR020843 Polyketide synthase, enoylreductase domain GO:0016491 CDA09_09120 eb4fa4d22120e311cbe27ab3158e2917 362 SUPERFAMILY SSF51735 151 327 1.53E-47 T 01-11-2018 IPR036291 NAD(P)-binding domain superfamily CDA09_09120 eb4fa4d22120e311cbe27ab3158e2917 362 Pfam PF00107 Zinc-binding dehydrogenase 189 318 3.2E-31 T 01-11-2018 IPR013149 Alcohol dehydrogenase, C-terminal GO:0055114 CDA09_09120 eb4fa4d22120e311cbe27ab3158e2917 362 ProSitePatterns PS00059 Zinc-containing alcohol dehydrogenases signature. 59 73 - T 01-11-2018 IPR002328 Alcohol dehydrogenase, zinc-type, conserved site GO:0008270|GO:0016491|GO:0055114 Reactome: R-HSA-71384 CDA09_09120 eb4fa4d22120e311cbe27ab3158e2917 362 Pfam PF08240 Alcohol dehydrogenase GroES-like domain 26 146 2.2E-25 T 01-11-2018 IPR013154 Alcohol dehydrogenase, N-terminal GO:0055114 CDA09_22460 2c1ef2567e01377352ae53fe108dcb4c 935 ProSitePatterns PS00641 Respiratory-chain NADH dehydrogenase 75 Kd subunit signature 1. 36 53 - T 01-11-2018 IPR000283 NADH:ubiquinone oxidoreductase, 75kDa subunit, conserved site GO:0008137|GO:0016020|GO:0042773|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 CDA09_22460 2c1ef2567e01377352ae53fe108dcb4c 935 Gene3D G3DSA:2.20.25.90 237 292 6.1E-17 T 01-11-2018 CDA09_22460 2c1ef2567e01377352ae53fe108dcb4c 935 Pfam PF00384 Molybdopterin oxidoreductase 296 732 1.9E-85 T 01-11-2018 IPR006656 Molybdopterin oxidoreductase GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 CDA09_22460 2c1ef2567e01377352ae53fe108dcb4c 935 Gene3D G3DSA:3.10.20.740 6 124 5.7E-24 T 01-11-2018 CDA09_22460 2c1ef2567e01377352ae53fe108dcb4c 935 SUPERFAMILY SSF54862 131 211 7.95E-15 T 01-11-2018 CDA09_22460 2c1ef2567e01377352ae53fe108dcb4c 935 Gene3D G3DSA:2.40.40.20 808 929 7.7E-41 T 01-11-2018 CDA09_22460 2c1ef2567e01377352ae53fe108dcb4c 935 Gene3D G3DSA:3.30.70.20 125 206 3.1E-20 T 01-11-2018 CDA09_22460 2c1ef2567e01377352ae53fe108dcb4c 935 Pfam PF01568 Molydopterin dinucleotide binding domain 819 924 4.6E-26 T 01-11-2018 IPR006657 Molybdopterin dinucleotide-binding domain GO:0016491|GO:0043546|GO:0055114 CDA09_22460 2c1ef2567e01377352ae53fe108dcb4c 935 Pfam PF04879 Molybdopterin oxidoreductase Fe4S4 domain 237 288 2.2E-11 T 01-11-2018 IPR006963 Molybdopterin oxidoreductase, 4Fe-4S domain GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 CDA09_22460 2c1ef2567e01377352ae53fe108dcb4c 935 Pfam PF13510 2Fe-2S iron-sulfur cluster binding domain 5 80 1.6E-16 T 01-11-2018 CDA09_22460 2c1ef2567e01377352ae53fe108dcb4c 935 SUPERFAMILY SSF50692 782 927 2.94E-43 T 01-11-2018 IPR009010 Aspartate decarboxylase-like domain superfamily CDA09_22460 2c1ef2567e01377352ae53fe108dcb4c 935 SMART SM00926 236 293 2.1E-13 T 01-11-2018 IPR006963 Molybdopterin oxidoreductase, 4Fe-4S domain GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 CDA09_22460 2c1ef2567e01377352ae53fe108dcb4c 935 ProSitePatterns PS00490 Prokaryotic molybdopterin oxidoreductases signature 2. 678 695 - T 01-11-2018 IPR006655 Molybdopterin oxidoreductase, prokaryotic, conserved site GO:0009055|GO:0016491|GO:0055114 CDA09_22460 2c1ef2567e01377352ae53fe108dcb4c 935 SUPERFAMILY SSF54292 6 125 1.98E-30 T 01-11-2018 IPR036010 2Fe-2S ferredoxin-like superfamily GO:0009055|GO:0051536 CDA09_22460 2c1ef2567e01377352ae53fe108dcb4c 935 Gene3D G3DSA:3.40.50.740 322 770 1.4E-174 T 01-11-2018 CDA09_22460 2c1ef2567e01377352ae53fe108dcb4c 935 TIGRFAM TIGR01591 Fdh-alpha: formate dehydrogenase, alpha subunit 242 927 1.4E-218 T 01-11-2018 IPR006478 Formate dehydrogenase, alpha subunit GO:0008863|GO:0015942|GO:0055114 KEGG: 00630+1.17.1.9|KEGG: 00680+1.17.1.9|MetaCyc: PWY-1881|MetaCyc: PWY-5497|MetaCyc: PWY-6696|MetaCyc: PWY-7985 CDA09_22460 2c1ef2567e01377352ae53fe108dcb4c 935 Gene3D G3DSA:3.40.228.10 388 586 1.4E-174 T 01-11-2018 CDA09_22460 2c1ef2567e01377352ae53fe108dcb4c 935 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 189 200 - T 01-11-2018 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site CDA09_22460 2c1ef2567e01377352ae53fe108dcb4c 935 SUPERFAMILY SSF53706 239 836 1.01E-194 T 01-11-2018 CDA09_22460 2c1ef2567e01377352ae53fe108dcb4c 935 PIRSF PIRSF036643 2 935 0.0 T 01-11-2018 CDA09_22460 2c1ef2567e01377352ae53fe108dcb4c 935 Pfam PF13187 4Fe-4S dicluster domain 145 203 1.3E-7 T 01-11-2018 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain CDA09_19785 dcdb371db7aa4c4e460099c34c4efb91 447 PRINTS PR00082 Glutamate/leucine/phenylalanine/valine dehydrogenase signature 113 127 1.2E-31 T 01-11-2018 IPR006095 Glutamate/phenylalanine/leucine/valine dehydrogenase GO:0006520|GO:0016491|GO:0055114 Reactome: R-HSA-2151201|Reactome: R-HSA-70614 CDA09_19785 dcdb371db7aa4c4e460099c34c4efb91 447 PRINTS PR00082 Glutamate/leucine/phenylalanine/valine dehydrogenase signature 234 254 1.2E-31 T 01-11-2018 IPR006095 Glutamate/phenylalanine/leucine/valine dehydrogenase GO:0006520|GO:0016491|GO:0055114 Reactome: R-HSA-2151201|Reactome: R-HSA-70614 CDA09_19785 dcdb371db7aa4c4e460099c34c4efb91 447 PRINTS PR00082 Glutamate/leucine/phenylalanine/valine dehydrogenase signature 192 214 1.2E-31 T 01-11-2018 IPR006095 Glutamate/phenylalanine/leucine/valine dehydrogenase GO:0006520|GO:0016491|GO:0055114 Reactome: R-HSA-2151201|Reactome: R-HSA-70614 CDA09_19785 dcdb371db7aa4c4e460099c34c4efb91 447 PRINTS PR00082 Glutamate/leucine/phenylalanine/valine dehydrogenase signature 371 382 1.2E-31 T 01-11-2018 IPR006095 Glutamate/phenylalanine/leucine/valine dehydrogenase GO:0006520|GO:0016491|GO:0055114 Reactome: R-HSA-2151201|Reactome: R-HSA-70614 CDA09_19785 dcdb371db7aa4c4e460099c34c4efb91 447 Gene3D G3DSA:3.40.50.10860 54 189 8.0E-170 T 01-11-2018 CDA09_19785 dcdb371db7aa4c4e460099c34c4efb91 447 Gene3D G3DSA:1.10.285.10 405 447 9.1E-9 T 01-11-2018 CDA09_19785 dcdb371db7aa4c4e460099c34c4efb91 447 SUPERFAMILY SSF53223 5 195 5.12E-74 T 01-11-2018 CDA09_19785 dcdb371db7aa4c4e460099c34c4efb91 447 Pfam PF02812 Glu/Leu/Phe/Val dehydrogenase, dimerisation domain 56 183 2.3E-51 T 01-11-2018 IPR006097 Glutamate/phenylalanine/leucine/valine dehydrogenase, dimerisation domain GO:0006520|GO:0016491|GO:0055114 Reactome: R-HSA-2151201|Reactome: R-HSA-70614 CDA09_19785 dcdb371db7aa4c4e460099c34c4efb91 447 PIRSF PIRSF000185 21 447 5.6E-117 T 01-11-2018 IPR014362 Glutamate dehydrogenase GO:0016639|GO:0055114 CDA09_19785 dcdb371db7aa4c4e460099c34c4efb91 447 SMART SM00839 203 445 7.4E-94 T 01-11-2018 IPR006096 Glutamate/phenylalanine/leucine/valine dehydrogenase, C-terminal GO:0006520|GO:0016491|GO:0055114 Reactome: R-HSA-2151201|Reactome: R-HSA-70614 CDA09_19785 dcdb371db7aa4c4e460099c34c4efb91 447 ProSitePatterns PS00074 Glu / Leu / Phe / Val dehydrogenases active site. 121 134 - T 01-11-2018 IPR033524 Leu/Phe/Val dehydrogenases active site Reactome: R-HSA-2151201|Reactome: R-HSA-70614 CDA09_19785 dcdb371db7aa4c4e460099c34c4efb91 447 Pfam PF00208 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase 201 445 1.2E-86 T 01-11-2018 IPR006096 Glutamate/phenylalanine/leucine/valine dehydrogenase, C-terminal GO:0006520|GO:0016491|GO:0055114 Reactome: R-HSA-2151201|Reactome: R-HSA-70614 CDA09_19785 dcdb371db7aa4c4e460099c34c4efb91 447 Gene3D G3DSA:3.40.50.720 208 372 8.0E-170 T 01-11-2018 CDA09_19785 dcdb371db7aa4c4e460099c34c4efb91 447 SUPERFAMILY SSF51735 201 446 1.49E-77 T 01-11-2018 IPR036291 NAD(P)-binding domain superfamily CDA09_19785 dcdb371db7aa4c4e460099c34c4efb91 447 Gene3D G3DSA:1.10.285.10 7 383 8.0E-170 T 01-11-2018 CDA09_13195 c8df7f9792fd2855469e727687d2509a 431 PRINTS PR00143 Citrate synthase signature 381 395 1.7E-54 T 01-11-2018 IPR002020 Citrate synthase GO:0046912 CDA09_13195 c8df7f9792fd2855469e727687d2509a 431 PRINTS PR00143 Citrate synthase signature 297 317 1.7E-54 T 01-11-2018 IPR002020 Citrate synthase GO:0046912 CDA09_13195 c8df7f9792fd2855469e727687d2509a 431 PRINTS PR00143 Citrate synthase signature 361 377 1.7E-54 T 01-11-2018 IPR002020 Citrate synthase GO:0046912 CDA09_13195 c8df7f9792fd2855469e727687d2509a 431 PRINTS PR00143 Citrate synthase signature 166 179 1.7E-54 T 01-11-2018 IPR002020 Citrate synthase GO:0046912 CDA09_13195 c8df7f9792fd2855469e727687d2509a 431 PRINTS PR00143 Citrate synthase signature 220 235 1.7E-54 T 01-11-2018 IPR002020 Citrate synthase GO:0046912 CDA09_13195 c8df7f9792fd2855469e727687d2509a 431 PRINTS PR00143 Citrate synthase signature 242 270 1.7E-54 T 01-11-2018 IPR002020 Citrate synthase GO:0046912 CDA09_13195 c8df7f9792fd2855469e727687d2509a 431 Gene3D G3DSA:1.10.230.10 269 378 4.7E-143 T 01-11-2018 IPR016143 Citrate synthase-like, small alpha subdomain CDA09_13195 c8df7f9792fd2855469e727687d2509a 431 Gene3D G3DSA:2.20.28.60 2 51 1.6E-21 T 01-11-2018 CDA09_13195 c8df7f9792fd2855469e727687d2509a 431 SUPERFAMILY SSF48256 6 430 1.96E-164 T 01-11-2018 IPR036969 Citrate synthase superfamily GO:0046912 CDA09_13195 c8df7f9792fd2855469e727687d2509a 431 TIGRFAM TIGR01798 cit_synth_I: citrate (Si)-synthase 14 424 1.6E-233 T 01-11-2018 IPR010953 Citrate synthase, type I GO:0004108|GO:0005737 CDA09_13195 c8df7f9792fd2855469e727687d2509a 431 Pfam PF00285 Citrate synthase, C-terminal domain 49 413 4.3E-130 T 01-11-2018 IPR002020 Citrate synthase GO:0046912 CDA09_13195 c8df7f9792fd2855469e727687d2509a 431 PIRSF PIRSF001369 38 431 7.7E-161 T 01-11-2018 IPR024176 Citrate synthase, bacterial-type CDA09_13195 c8df7f9792fd2855469e727687d2509a 431 ProSitePatterns PS00480 Citrate synthase signature. 304 316 - T 01-11-2018 IPR019810 Citrate synthase active site GO:0006099|GO:0046912 Reactome: R-HSA-1268020|Reactome: R-HSA-71403 CDA09_13195 c8df7f9792fd2855469e727687d2509a 431 Gene3D G3DSA:1.10.580.10 58 413 4.7E-143 T 01-11-2018 IPR016142 Citrate synthase-like, large alpha subdomain Reactome: R-HSA-1268020|Reactome: R-HSA-71403 CDA09_18025 29088b4a55e8f6a345dc235971066977 334 Pfam PF03480 Bacterial extracellular solute-binding protein, family 7 29 312 7.9E-108 T 01-11-2018 IPR018389 TRAP transporter solute receptor DctP/TeaA GO:0030288|GO:0055085 CDA09_18025 29088b4a55e8f6a345dc235971066977 334 SUPERFAMILY SSF53850 153 272 5.83E-6 T 01-11-2018 CDA09_18025 29088b4a55e8f6a345dc235971066977 334 PIRSF PIRSF006470 1 329 6.2E-140 T 01-11-2018 IPR004682 TRAP transporter solute receptor, DctP family GO:0030288|GO:0055085 CDA09_18025 29088b4a55e8f6a345dc235971066977 334 TIGRFAM TIGR00787 dctP: TRAP transporter solute receptor, DctP family 29 283 1.3E-102 T 01-11-2018 IPR004682 TRAP transporter solute receptor, DctP family GO:0030288|GO:0055085 CDA09_18025 29088b4a55e8f6a345dc235971066977 334 Gene3D G3DSA:3.40.190.170 24 325 8.8E-106 T 01-11-2018 IPR038404 TRAP transporter solute receptor DctP superfamily CDA09_13350 c360ad98a168e61cdde439f20c45bb07 502 PRINTS PR00762 Chloride channel signature 436 455 3.8E-27 T 01-11-2018 IPR001807 Chloride channel, voltage gated GO:0005247|GO:0006821|GO:0016020|GO:0055085 Reactome: R-HSA-2672351 CDA09_13350 c360ad98a168e61cdde439f20c45bb07 502 PRINTS PR00762 Chloride channel signature 222 241 3.8E-27 T 01-11-2018 IPR001807 Chloride channel, voltage gated GO:0005247|GO:0006821|GO:0016020|GO:0055085 Reactome: R-HSA-2672351 CDA09_13350 c360ad98a168e61cdde439f20c45bb07 502 PRINTS PR00762 Chloride channel signature 137 154 3.8E-27 T 01-11-2018 IPR001807 Chloride channel, voltage gated GO:0005247|GO:0006821|GO:0016020|GO:0055085 Reactome: R-HSA-2672351 CDA09_13350 c360ad98a168e61cdde439f20c45bb07 502 PRINTS PR00762 Chloride channel signature 389 409 3.8E-27 T 01-11-2018 IPR001807 Chloride channel, voltage gated GO:0005247|GO:0006821|GO:0016020|GO:0055085 Reactome: R-HSA-2672351 CDA09_13350 c360ad98a168e61cdde439f20c45bb07 502 PRINTS PR00762 Chloride channel signature 418 434 3.8E-27 T 01-11-2018 IPR001807 Chloride channel, voltage gated GO:0005247|GO:0006821|GO:0016020|GO:0055085 Reactome: R-HSA-2672351 CDA09_13350 c360ad98a168e61cdde439f20c45bb07 502 PRINTS PR00762 Chloride channel signature 171 190 3.8E-27 T 01-11-2018 IPR001807 Chloride channel, voltage gated GO:0005247|GO:0006821|GO:0016020|GO:0055085 Reactome: R-HSA-2672351 CDA09_13350 c360ad98a168e61cdde439f20c45bb07 502 Pfam PF00654 Voltage gated chloride channel 124 468 4.0E-72 T 01-11-2018 IPR001807 Chloride channel, voltage gated GO:0005247|GO:0006821|GO:0016020|GO:0055085 Reactome: R-HSA-2672351 CDA09_13350 c360ad98a168e61cdde439f20c45bb07 502 SUPERFAMILY SSF81340 65 480 2.09E-78 T 01-11-2018 IPR014743 Chloride channel, core Reactome: R-HSA-2672351 CDA09_13350 c360ad98a168e61cdde439f20c45bb07 502 Gene3D G3DSA:1.10.3080.10 75 488 4.3E-74 T 01-11-2018 IPR014743 Chloride channel, core Reactome: R-HSA-2672351 CDA09_13860 289878befa1e339137f79acfddf713fa 351 SUPERFAMILY SSF56112 9 343 8.6E-54 T 01-11-2018 IPR011009 Protein kinase-like domain superfamily CDA09_13860 289878befa1e339137f79acfddf713fa 351 Gene3D G3DSA:3.90.1200.10 122 349 8.4E-59 T 01-11-2018 CDA09_13860 289878befa1e339137f79acfddf713fa 351 Gene3D G3DSA:3.30.200.20 9 110 1.8E-19 T 01-11-2018 CDA09_13860 289878befa1e339137f79acfddf713fa 351 Pfam PF01636 Phosphotransferase enzyme family 32 299 6.5E-39 T 01-11-2018 IPR002575 Aminoglycoside phosphotransferase CDA09_19560 19878f333c2c0ef3c3838963a6376c4e 1377 Gene3D G3DSA:2.40.50.100 739 813 7.2E-29 T 01-11-2018 CDA09_19560 19878f333c2c0ef3c3838963a6376c4e 1377 Gene3D G3DSA:3.90.1100.10 668 738 2.0E-21 T 01-11-2018 CDA09_19560 19878f333c2c0ef3c3838963a6376c4e 1377 Gene3D G3DSA:3.90.1100.10 18 174 1.7E-52 T 01-11-2018 CDA09_19560 19878f333c2c0ef3c3838963a6376c4e 1377 TIGRFAM TIGR02013 rpoB: DNA-directed RNA polymerase, beta subunit 8 1373 0.0 T 01-11-2018 IPR010243 DNA-directed RNA polymerase beta subunit, bacterial-type GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 CDA09_19560 19878f333c2c0ef3c3838963a6376c4e 1377 Pfam PF10385 RNA polymerase beta subunit external 1 domain 616 681 1.3E-23 T 01-11-2018 IPR019462 DNA-directed RNA polymerase, beta subunit, external 1 domain GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 CDA09_19560 19878f333c2c0ef3c3838963a6376c4e 1377 Gene3D G3DSA:3.90.1800.10 1287 1346 6.5E-11 T 01-11-2018 CDA09_19560 19878f333c2c0ef3c3838963a6376c4e 1377 Gene3D G3DSA:2.40.270.10 815 857 3.4E-7 T 01-11-2018 IPR037033 DNA-directed RNA polymerase, subunit 2, hybrid-binding domain superfamily GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 CDA09_19560 19878f333c2c0ef3c3838963a6376c4e 1377 Gene3D G3DSA:3.90.1100.10 468 647 3.0E-71 T 01-11-2018 CDA09_19560 19878f333c2c0ef3c3838963a6376c4e 1377 Gene3D G3DSA:2.40.270.10 1057 1277 7.2E-83 T 01-11-2018 IPR037033 DNA-directed RNA polymerase, subunit 2, hybrid-binding domain superfamily GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 CDA09_19560 19878f333c2c0ef3c3838963a6376c4e 1377 Pfam PF00562 RNA polymerase Rpb2, domain 6 743 1299 8.1E-161 T 01-11-2018 IPR007120 DNA-directed RNA polymerase, subunit 2, hybrid-binding domain GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 CDA09_19560 19878f333c2c0ef3c3838963a6376c4e 1377 SUPERFAMILY SSF64484 12 1375 0.0 T 01-11-2018 CDA09_19560 19878f333c2c0ef3c3838963a6376c4e 1377 Pfam PF04560 RNA polymerase Rpb2, domain 7 1301 1375 1.1E-26 T 01-11-2018 IPR007641 RNA polymerase Rpb2, domain 7 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 CDA09_19560 19878f333c2c0ef3c3838963a6376c4e 1377 Pfam PF04561 RNA polymerase Rpb2, domain 2 155 237 8.7E-7 T 01-11-2018 IPR007642 RNA polymerase Rpb2, domain 2 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 CDA09_19560 19878f333c2c0ef3c3838963a6376c4e 1377 Pfam PF04561 RNA polymerase Rpb2, domain 2 445 479 3.3E-6 T 01-11-2018 IPR007642 RNA polymerase Rpb2, domain 2 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 CDA09_19560 19878f333c2c0ef3c3838963a6376c4e 1377 Gene3D G3DSA:2.40.50.150 858 976 1.1E-43 T 01-11-2018 IPR014724 RNA polymerase Rpb2, OB-fold GO:0003899 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 CDA09_19560 19878f333c2c0ef3c3838963a6376c4e 1377 ProSitePatterns PS01166 RNA polymerases beta chain signature. 1101 1113 - T 01-11-2018 IPR007121 RNA polymerase, beta subunit, conserved site GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 CDA09_19560 19878f333c2c0ef3c3838963a6376c4e 1377 Pfam PF04565 RNA polymerase Rpb2, domain 3 538 605 1.1E-31 T 01-11-2018 IPR007645 RNA polymerase Rpb2, domain 3 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 CDA09_19560 19878f333c2c0ef3c3838963a6376c4e 1377 Hamap MF_01321 DNA-directed RNA polymerase subunit beta [rpoB]. 13 1377 12.235 T 01-11-2018 IPR010243 DNA-directed RNA polymerase beta subunit, bacterial-type GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 CDA09_19560 19878f333c2c0ef3c3838963a6376c4e 1377 Pfam PF04563 RNA polymerase beta subunit 27 525 8.1E-39 T 01-11-2018 IPR007644 RNA polymerase, beta subunit, protrusion GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 CDA09_19560 19878f333c2c0ef3c3838963a6376c4e 1377 Gene3D G3DSA:3.90.1110.10 329 467 2.0E-27 T 01-11-2018 IPR037034 RNA polymerase Rpb2, domain 2 superfamily GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 CDA09_11530 bf661e8a321946b05bfdc45f1e0acd07 327 Pfam PF01493 GXGXG motif 137 263 6.7E-11 T 01-11-2018 IPR002489 Glutamate synthase, alpha subunit, C-terminal GO:0016491|GO:0055114 CDA09_11530 bf661e8a321946b05bfdc45f1e0acd07 327 SUPERFAMILY SSF69336 89 302 6.15E-39 T 01-11-2018 IPR036485 Glutamate synthase, alpha subunit, C-terminal domain superfamily GO:0016491|GO:0055114 CDA09_11530 bf661e8a321946b05bfdc45f1e0acd07 327 Gene3D G3DSA:2.160.20.60 130 276 1.0E-18 T 01-11-2018 IPR036485 Glutamate synthase, alpha subunit, C-terminal domain superfamily GO:0016491|GO:0055114 CDA09_11530 bf661e8a321946b05bfdc45f1e0acd07 327 TIGRFAM TIGR03122 one_C_dehyd_C: formylmethanofuran dehydrogenase subunit C 62 323 7.1E-67 T 01-11-2018 IPR017550 Formylmethanofuran dehydrogenase subunit C GO:0015948|GO:0018493|GO:0046914|GO:0055114 KEGG: 00680+1.2.7.12|MetaCyc: PWY-5209|MetaCyc: PWY-7784 CDA09_16210 1165ded25e6061923042a4707a9c73b6 159 SUPERFAMILY SSF52833 2 157 1.79E-54 T 01-11-2018 IPR036249 Thioredoxin-like superfamily CDA09_16210 1165ded25e6061923042a4707a9c73b6 159 TIGRFAM TIGR01958 nuoE_fam: NADH-quinone oxidoreductase, E subunit 9 157 1.5E-62 T 01-11-2018 IPR002023 NADH-quinone oxidoreductase subunit E-like GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 CDA09_16210 1165ded25e6061923042a4707a9c73b6 159 ProSitePatterns PS01099 Respiratory-chain NADH dehydrogenase 24 Kd subunit signature. 113 131 - T 01-11-2018 IPR002023 NADH-quinone oxidoreductase subunit E-like GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 CDA09_16210 1165ded25e6061923042a4707a9c73b6 159 Pfam PF01257 Thioredoxin-like [2Fe-2S] ferredoxin 11 156 1.9E-51 T 01-11-2018 CDA09_16210 1165ded25e6061923042a4707a9c73b6 159 Gene3D G3DSA:1.10.10.1590 1 73 9.2E-25 T 01-11-2018 CDA09_16210 1165ded25e6061923042a4707a9c73b6 159 Gene3D G3DSA:3.40.30.10 74 159 1.8E-26 T 01-11-2018 CDA09_16210 1165ded25e6061923042a4707a9c73b6 159 PIRSF PIRSF000216 1 159 7.0E-58 T 01-11-2018 IPR002023 NADH-quinone oxidoreductase subunit E-like GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 CDA09_03510 3d3f2d684617b570ab145445fdaa0afa 243 Pfam PF04172 LrgB-like family 23 236 7.5E-80 T 01-11-2018 IPR007300 CidB/LrgB family CDA09_21510 05e8a74889450a8ed11fdbfe09f5b65f 293 Gene3D G3DSA:3.90.25.10 176 285 5.3E-61 T 01-11-2018 CDA09_21510 05e8a74889450a8ed11fdbfe09f5b65f 293 SUPERFAMILY SSF51735 40 270 1.77E-41 T 01-11-2018 IPR036291 NAD(P)-binding domain superfamily CDA09_21510 05e8a74889450a8ed11fdbfe09f5b65f 293 Pfam PF13460 NAD(P)H-binding 45 221 1.9E-15 T 01-11-2018 IPR016040 NAD(P)-binding domain CDA09_21510 05e8a74889450a8ed11fdbfe09f5b65f 293 Gene3D G3DSA:3.40.50.720 43 231 5.3E-61 T 01-11-2018 CDA09_21010 4f926f5a5eb8c752c7cb7722ebdc9cf4 560 Pfam PF01494 FAD binding domain 27 365 3.0E-61 T 01-11-2018 IPR002938 FAD-binding domain GO:0071949 CDA09_21010 4f926f5a5eb8c752c7cb7722ebdc9cf4 560 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 351 367 1.2E-33 T 01-11-2018 CDA09_21010 4f926f5a5eb8c752c7cb7722ebdc9cf4 560 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 27 49 1.2E-33 T 01-11-2018 CDA09_21010 4f926f5a5eb8c752c7cb7722ebdc9cf4 560 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 175 190 1.2E-33 T 01-11-2018 CDA09_21010 4f926f5a5eb8c752c7cb7722ebdc9cf4 560 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 315 331 1.2E-33 T 01-11-2018 CDA09_21010 4f926f5a5eb8c752c7cb7722ebdc9cf4 560 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 300 315 1.2E-33 T 01-11-2018 CDA09_21010 4f926f5a5eb8c752c7cb7722ebdc9cf4 560 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 333 351 1.2E-33 T 01-11-2018 CDA09_21010 4f926f5a5eb8c752c7cb7722ebdc9cf4 560 Gene3D G3DSA:3.50.50.60 28 360 2.2E-86 T 01-11-2018 IPR036188 FAD/NAD(P)-binding domain superfamily CDA09_21010 4f926f5a5eb8c752c7cb7722ebdc9cf4 560 Gene3D G3DSA:3.40.30.120 397 557 8.3E-15 T 01-11-2018 CDA09_21010 4f926f5a5eb8c752c7cb7722ebdc9cf4 560 Gene3D G3DSA:3.30.70.2450 204 289 2.2E-86 T 01-11-2018 CDA09_21010 4f926f5a5eb8c752c7cb7722ebdc9cf4 560 SUPERFAMILY SSF51905 27 398 1.73E-59 T 01-11-2018 IPR036188 FAD/NAD(P)-binding domain superfamily CDA09_19660 bd4491bc172901ef05a1de0cc760da9f 388 SUPERFAMILY SSF89796 4 388 1.31E-126 T 01-11-2018 IPR023606 CoA-transferase family III domain superfamily CDA09_19660 bd4491bc172901ef05a1de0cc760da9f 388 Gene3D G3DSA:3.30.1540.10 229 322 3.0E-116 T 01-11-2018 CDA09_19660 bd4491bc172901ef05a1de0cc760da9f 388 Pfam PF02515 CoA-transferase family III 6 364 1.4E-105 T 01-11-2018 IPR003673 CoA-transferase family III GO:0003824 CDA09_19660 bd4491bc172901ef05a1de0cc760da9f 388 Gene3D G3DSA:3.40.50.10540 5 382 3.0E-116 T 01-11-2018 IPR023606 CoA-transferase family III domain superfamily CDA09_10815 f6388576491681996fe92f143365562b 221 Pfam PF12710 haloacid dehalogenase-like hydrolase 4 172 2.1E-13 T 01-11-2018 CDA09_10815 f6388576491681996fe92f143365562b 221 Gene3D G3DSA:3.40.50.1000 4 204 3.6E-53 T 01-11-2018 IPR023214 HAD superfamily CDA09_10815 f6388576491681996fe92f143365562b 221 TIGRFAM TIGR01488 HAD-SF-IB: HAD phosphoserine phosphatase-like hydrolase, family IB 3 172 2.2E-17 T 01-11-2018 CDA09_10815 f6388576491681996fe92f143365562b 221 SUPERFAMILY SSF56784 2 208 1.27E-31 T 01-11-2018 IPR036412 HAD-like superfamily CDA09_10815 f6388576491681996fe92f143365562b 221 Gene3D G3DSA:3.90.1470.20 12 130 3.6E-53 T 01-11-2018 CDA09_07105 87421d627b136e487efe897acd5fa330 145 SUPERFAMILY SSF54637 1 140 1.94E-51 T 01-11-2018 IPR029069 HotDog domain superfamily CDA09_07105 87421d627b136e487efe897acd5fa330 145 Pfam PF07977 FabA-like domain 10 136 1.9E-39 T 01-11-2018 IPR013114 Beta-hydroxydecanoyl thiol ester dehydrase, FabA/FabZ KEGG: 00061+4.2.1.59|KEGG: 00780+4.2.1.59|MetaCyc: PWY-5971|MetaCyc: PWY-5973|MetaCyc: PWY-5989|MetaCyc: PWY-5994|MetaCyc: PWY-6113|MetaCyc: PWY-6282|MetaCyc: PWY-6519|MetaCyc: PWY-7388|MetaCyc: PWY-7663|MetaCyc: PWY-7664|MetaCyc: PWY-7858|MetaCyc: PWYG-321 CDA09_07105 87421d627b136e487efe897acd5fa330 145 Hamap MF_00406 3-hydroxyacyl-[acyl-carrier-protein] dehydratase FabZ [fabZ]. 1 143 37.057 T 01-11-2018 IPR010084 Beta-hydroxyacyl-(acyl-carrier-protein) dehydratase FabZ GO:0005737|GO:0006633|GO:0016836 KEGG: 00061+4.2.1.59|KEGG: 00780+4.2.1.59|MetaCyc: PWY-5971|MetaCyc: PWY-5973|MetaCyc: PWY-5989|MetaCyc: PWY-5994|MetaCyc: PWY-6113|MetaCyc: PWY-6282|MetaCyc: PWY-6519|MetaCyc: PWY-7388|MetaCyc: PWY-7663|MetaCyc: PWY-7664|MetaCyc: PWY-7858|MetaCyc: PWYG-321 CDA09_07105 87421d627b136e487efe897acd5fa330 145 TIGRFAM TIGR01750 fabZ: beta-hydroxyacyl-(acyl-carrier-protein) dehydratase FabZ 1 140 2.9E-62 T 01-11-2018 IPR010084 Beta-hydroxyacyl-(acyl-carrier-protein) dehydratase FabZ GO:0005737|GO:0006633|GO:0016836 KEGG: 00061+4.2.1.59|KEGG: 00780+4.2.1.59|MetaCyc: PWY-5971|MetaCyc: PWY-5973|MetaCyc: PWY-5989|MetaCyc: PWY-5994|MetaCyc: PWY-6113|MetaCyc: PWY-6282|MetaCyc: PWY-6519|MetaCyc: PWY-7388|MetaCyc: PWY-7663|MetaCyc: PWY-7664|MetaCyc: PWY-7858|MetaCyc: PWYG-321 CDA09_07105 87421d627b136e487efe897acd5fa330 145 Gene3D G3DSA:3.10.129.10 1 144 4.0E-62 T 01-11-2018 CDA09_13305 9f3e5e6a3c5161aa2b7b43603f174356 555 Gene3D G3DSA:3.40.50.11540 136 257 9.6E-14 T 01-11-2018 IPR037225 NADH-ubiquinone oxidoreductase 51kDa subunit, FMN-binding domain superfamily Reactome: R-HSA-611105|Reactome: R-HSA-6799198 CDA09_13305 9f3e5e6a3c5161aa2b7b43603f174356 555 Hamap MF_00461 Ion-translocating oxidoreductase complex subunit C [rsxC]. 1 555 171.329 T 01-11-2018 IPR010208 Ion-translocating oxidoreductase complex, subunit RnfC/RsxC GO:0009055|GO:0016020|GO:0051539 CDA09_13305 9f3e5e6a3c5161aa2b7b43603f174356 555 TIGRFAM TIGR01945 rnfC: electron transport complex, RnfABCDGE type, C subunit 5 436 3.5E-158 T 01-11-2018 IPR010208 Ion-translocating oxidoreductase complex, subunit RnfC/RsxC GO:0009055|GO:0016020|GO:0051539 CDA09_13305 9f3e5e6a3c5161aa2b7b43603f174356 555 SUPERFAMILY SSF142019 87 294 9.02E-57 T 01-11-2018 IPR037225 NADH-ubiquinone oxidoreductase 51kDa subunit, FMN-binding domain superfamily Reactome: R-HSA-611105|Reactome: R-HSA-6799198 CDA09_13305 9f3e5e6a3c5161aa2b7b43603f174356 555 Gene3D G3DSA:1.10.1060.10 363 433 1.2E-12 T 01-11-2018 IPR009051 Alpha-helical ferredoxin GO:0051536 CDA09_13305 9f3e5e6a3c5161aa2b7b43603f174356 555 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 406 417 - T 01-11-2018 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site CDA09_13305 9f3e5e6a3c5161aa2b7b43603f174356 555 SUPERFAMILY SSF46548 320 430 7.5E-20 T 01-11-2018 IPR009051 Alpha-helical ferredoxin GO:0051536 CDA09_13305 9f3e5e6a3c5161aa2b7b43603f174356 555 Pfam PF13375 RnfC Barrel sandwich hybrid domain 7 108 2.3E-30 T 01-11-2018 IPR026902 RnfC Barrel sandwich hybrid domain CDA09_13305 9f3e5e6a3c5161aa2b7b43603f174356 555 Pfam PF12838 4Fe-4S dicluster domain 367 419 8.3E-7 T 01-11-2018 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain CDA09_13305 9f3e5e6a3c5161aa2b7b43603f174356 555 Pfam PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit 132 276 1.8E-45 T 01-11-2018 IPR011538 NADH-ubiquinone oxidoreductase 51kDa subunit, FMN-binding domain Reactome: R-HSA-611105|Reactome: R-HSA-6799198 CDA09_13305 9f3e5e6a3c5161aa2b7b43603f174356 555 Pfam PF10531 SLBB domain 288 334 2.0E-13 T 01-11-2018 IPR019554 Soluble ligand binding domain Reactome: R-HSA-611105|Reactome: R-HSA-6799198 CDA09_18190 673c91fa569e1675ad9bac1b44d27043 410 TIGRFAM TIGR02614 ftsW: cell division protein FtsW 42 401 7.4E-127 T 01-11-2018 IPR013437 Probable peptidoglycan glycosyltransferase FtsW GO:0009252|GO:0016021|GO:0051301 KEGG: 00550+2.4.1.129|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471 CDA09_18190 673c91fa569e1675ad9bac1b44d27043 410 Pfam PF01098 Cell cycle protein 44 403 3.7E-103 T 01-11-2018 IPR001182 Probable peptidoglycan glycosyltransferase FtsW/RodA GO:0016021|GO:0051301 KEGG: 00550+2.4.1.129|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471 CDA09_18190 673c91fa569e1675ad9bac1b44d27043 410 Hamap MF_00913 Probable peptidoglycan glycosyltransferase FtsW [ftsW]. 39 410 40.736 T 01-11-2018 IPR013437 Probable peptidoglycan glycosyltransferase FtsW GO:0009252|GO:0016021|GO:0051301 KEGG: 00550+2.4.1.129|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471 CDA09_22320 54cd97603160e2765bcfb47a0b042d3d 533 SUPERFAMILY SSF52091 436 491 7.06E-7 T 01-11-2018 IPR036513 STAS domain superfamily CDA09_22320 54cd97603160e2765bcfb47a0b042d3d 533 Gene3D G3DSA:3.30.750.24 432 499 9.0E-6 T 01-11-2018 IPR036513 STAS domain superfamily CDA09_22320 54cd97603160e2765bcfb47a0b042d3d 533 Pfam PF00916 Sulfate permease family 21 383 1.4E-43 T 01-11-2018 IPR011547 SLC26A/SulP transporter domain GO:0008272|GO:0015116|GO:0016021 CDA09_22320 54cd97603160e2765bcfb47a0b042d3d 533 Pfam PF01740 STAS domain 436 492 6.8E-5 T 01-11-2018 IPR002645 STAS domain CDA09_07045 234c2fd4837cd08164b2fa40fc22b382 271 ProSitePatterns PS00680 Methionine aminopeptidase subfamily 1 signature. 173 191 - T 01-11-2018 IPR002467 Peptidase M24A, methionine aminopeptidase, subfamily 1 GO:0004177|GO:0006508|GO:0008235 MetaCyc: PWY-7799|MetaCyc: PWY-7800 CDA09_07045 234c2fd4837cd08164b2fa40fc22b382 271 Hamap MF_01974 Methionine aminopeptidase [map]. 3 256 41.88 T 01-11-2018 IPR002467 Peptidase M24A, methionine aminopeptidase, subfamily 1 GO:0004177|GO:0006508|GO:0008235 MetaCyc: PWY-7799|MetaCyc: PWY-7800 CDA09_07045 234c2fd4837cd08164b2fa40fc22b382 271 TIGRFAM TIGR00500 met_pdase_I: methionine aminopeptidase, type I 3 255 2.4E-97 T 01-11-2018 IPR002467 Peptidase M24A, methionine aminopeptidase, subfamily 1 GO:0004177|GO:0006508|GO:0008235 MetaCyc: PWY-7799|MetaCyc: PWY-7800 CDA09_07045 234c2fd4837cd08164b2fa40fc22b382 271 PRINTS PR00599 Methionine aminopeptidase-1 signature 96 112 5.0E-22 T 01-11-2018 IPR001714 Peptidase M24, methionine aminopeptidase MetaCyc: PWY-7799|MetaCyc: PWY-7800 CDA09_07045 234c2fd4837cd08164b2fa40fc22b382 271 PRINTS PR00599 Methionine aminopeptidase-1 signature 74 87 5.0E-22 T 01-11-2018 IPR001714 Peptidase M24, methionine aminopeptidase MetaCyc: PWY-7799|MetaCyc: PWY-7800 CDA09_07045 234c2fd4837cd08164b2fa40fc22b382 271 PRINTS PR00599 Methionine aminopeptidase-1 signature 198 210 5.0E-22 T 01-11-2018 IPR001714 Peptidase M24, methionine aminopeptidase MetaCyc: PWY-7799|MetaCyc: PWY-7800 CDA09_07045 234c2fd4837cd08164b2fa40fc22b382 271 PRINTS PR00599 Methionine aminopeptidase-1 signature 167 179 5.0E-22 T 01-11-2018 IPR001714 Peptidase M24, methionine aminopeptidase MetaCyc: PWY-7799|MetaCyc: PWY-7800 CDA09_07045 234c2fd4837cd08164b2fa40fc22b382 271 Gene3D G3DSA:3.90.230.10 1 259 2.5E-112 T 01-11-2018 CDA09_07045 234c2fd4837cd08164b2fa40fc22b382 271 Pfam PF00557 Metallopeptidase family M24 12 247 2.8E-55 T 01-11-2018 IPR000994 Peptidase M24 CDA09_07045 234c2fd4837cd08164b2fa40fc22b382 271 SUPERFAMILY SSF55920 3 257 6.41E-92 T 01-11-2018 IPR036005 Creatinase/aminopeptidase-like CDA09_13520 f0212db3fda930250e9e31028ba73c39 189 Pfam PF00866 Ring hydroxylating beta subunit 37 180 8.4E-33 T 01-11-2018 IPR000391 Ring-hydroxylating dioxygenase beta subunit GO:0006725|GO:0055114 CDA09_13520 f0212db3fda930250e9e31028ba73c39 189 SUPERFAMILY SSF54427 19 189 8.77E-40 T 01-11-2018 IPR032710 NTF2-like domain superfamily CDA09_13520 f0212db3fda930250e9e31028ba73c39 189 Gene3D G3DSA:3.10.450.50 12 189 1.3E-51 T 01-11-2018 CDA09_06850 eaec47e807cc37f8bd53577c86c5eb73 896 SMART SM00448 777 890 1.4E-37 T 01-11-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 CDA09_06850 eaec47e807cc37f8bd53577c86c5eb73 896 Pfam PF08447 PAS fold 409 497 1.2E-22 T 01-11-2018 IPR013655 PAS fold-3 GO:0005515 CDA09_06850 eaec47e807cc37f8bd53577c86c5eb73 896 Pfam PF08447 PAS fold 257 340 2.9E-7 T 01-11-2018 IPR013655 PAS fold-3 GO:0005515 CDA09_06850 eaec47e807cc37f8bd53577c86c5eb73 896 SMART SM00388 523 588 5.0E-22 T 01-11-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 CDA09_06850 eaec47e807cc37f8bd53577c86c5eb73 896 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 225 355 5.5E-11 T 01-11-2018 IPR000014 PAS domain CDA09_06850 eaec47e807cc37f8bd53577c86c5eb73 896 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 385 508 1.1E-14 T 01-11-2018 IPR000014 PAS domain CDA09_06850 eaec47e807cc37f8bd53577c86c5eb73 896 Pfam PF00072 Response regulator receiver domain 779 889 4.2E-27 T 01-11-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 CDA09_06850 eaec47e807cc37f8bd53577c86c5eb73 896 SMART SM00086 460 503 2.1E-10 T 01-11-2018 IPR001610 PAC motif CDA09_06850 eaec47e807cc37f8bd53577c86c5eb73 896 SMART SM00086 307 348 5.3E-4 T 01-11-2018 IPR001610 PAC motif CDA09_06850 eaec47e807cc37f8bd53577c86c5eb73 896 SMART SM00091 385 454 3.2E-11 T 01-11-2018 IPR000014 PAS domain CDA09_06850 eaec47e807cc37f8bd53577c86c5eb73 896 SMART SM00091 229 301 37.0 T 01-11-2018 IPR000014 PAS domain CDA09_06850 eaec47e807cc37f8bd53577c86c5eb73 896 SUPERFAMILY SSF47384 507 589 2.75E-20 T 01-11-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 CDA09_06850 eaec47e807cc37f8bd53577c86c5eb73 896 SUPERFAMILY SSF52172 775 895 6.26E-40 T 01-11-2018 IPR011006 CheY-like superfamily CDA09_06850 eaec47e807cc37f8bd53577c86c5eb73 896 SUPERFAMILY SSF55874 577 745 1.44E-42 T 01-11-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily CDA09_06850 eaec47e807cc37f8bd53577c86c5eb73 896 Gene3D G3DSA:3.30.450.20 381 498 2.8E-32 T 01-11-2018 CDA09_06850 eaec47e807cc37f8bd53577c86c5eb73 896 Gene3D G3DSA:3.30.565.10 587 751 2.0E-48 T 01-11-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily CDA09_06850 eaec47e807cc37f8bd53577c86c5eb73 896 PRINTS PR00344 Bacterial sensor protein C-terminal signature 710 728 7.2E-13 T 01-11-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 CDA09_06850 eaec47e807cc37f8bd53577c86c5eb73 896 PRINTS PR00344 Bacterial sensor protein C-terminal signature 675 689 7.2E-13 T 01-11-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 CDA09_06850 eaec47e807cc37f8bd53577c86c5eb73 896 PRINTS PR00344 Bacterial sensor protein C-terminal signature 734 747 7.2E-13 T 01-11-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 CDA09_06850 eaec47e807cc37f8bd53577c86c5eb73 896 PRINTS PR00344 Bacterial sensor protein C-terminal signature 693 703 7.2E-13 T 01-11-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 CDA09_06850 eaec47e807cc37f8bd53577c86c5eb73 896 SMART SM00387 634 750 3.8E-37 T 01-11-2018 IPR003594 Histidine kinase/HSP90-like ATPase CDA09_06850 eaec47e807cc37f8bd53577c86c5eb73 896 Gene3D G3DSA:1.10.287.130 499 586 1.4E-26 T 01-11-2018 CDA09_06850 eaec47e807cc37f8bd53577c86c5eb73 896 Pfam PF00512 His Kinase A (phospho-acceptor) domain 523 588 9.6E-19 T 01-11-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 CDA09_06850 eaec47e807cc37f8bd53577c86c5eb73 896 SUPERFAMILY SSF55785 216 346 6.11E-15 T 01-11-2018 IPR035965 PAS domain superfamily CDA09_06850 eaec47e807cc37f8bd53577c86c5eb73 896 Gene3D G3DSA:3.30.450.20 219 346 4.5E-16 T 01-11-2018 CDA09_06850 eaec47e807cc37f8bd53577c86c5eb73 896 Gene3D G3DSA:3.40.50.12740 776 896 2.0E-46 T 01-11-2018 CDA09_06850 eaec47e807cc37f8bd53577c86c5eb73 896 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 634 749 6.7E-29 T 01-11-2018 IPR003594 Histidine kinase/HSP90-like ATPase CDA09_06850 eaec47e807cc37f8bd53577c86c5eb73 896 SUPERFAMILY SSF55785 391 505 1.92E-26 T 01-11-2018 IPR035965 PAS domain superfamily CDA09_19050 57712e65abea3973c62cff9e90c3fb64 223 Pfam PF00486 Transcriptional regulatory protein, C terminal 147 220 1.2E-24 T 01-11-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 CDA09_19050 57712e65abea3973c62cff9e90c3fb64 223 SMART SM00448 1 112 1.2E-40 T 01-11-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 CDA09_19050 57712e65abea3973c62cff9e90c3fb64 223 SUPERFAMILY SSF52172 2 174 4.98E-41 T 01-11-2018 IPR011006 CheY-like superfamily CDA09_19050 57712e65abea3973c62cff9e90c3fb64 223 TIGRFAM TIGR01387 cztR_silR_copR: heavy metal response regulator 3 220 4.8E-109 T 01-11-2018 IPR006291 Transcriptional regulatory protein PcoR, heavy metal response GO:0003677|GO:0006355 CDA09_19050 57712e65abea3973c62cff9e90c3fb64 223 SMART SM00862 145 220 2.1E-24 T 01-11-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 CDA09_19050 57712e65abea3973c62cff9e90c3fb64 223 Gene3D G3DSA:3.40.50.2300 1 121 2.5E-40 T 01-11-2018 CDA09_19050 57712e65abea3973c62cff9e90c3fb64 223 Pfam PF00072 Response regulator receiver domain 3 113 4.2E-27 T 01-11-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 CDA09_19050 57712e65abea3973c62cff9e90c3fb64 223 Gene3D G3DSA:1.10.10.10 123 223 2.1E-30 T 01-11-2018 IPR036388 Winged helix-like DNA-binding domain superfamily CDA09_00770 30f9093f418d4f13768c6d07f3f688ff 384 Pfam PF13458 Periplasmic binding protein 25 352 6.2E-70 T 01-11-2018 IPR028081 Leucine-binding protein domain CDA09_00770 30f9093f418d4f13768c6d07f3f688ff 384 PRINTS PR00337 Leu/Ile/Val-binding protein family signature 25 41 1.3E-9 T 01-11-2018 IPR000709 Leu/Ile/Val-binding protein GO:0006865 CDA09_00770 30f9093f418d4f13768c6d07f3f688ff 384 PRINTS PR00337 Leu/Ile/Val-binding protein family signature 254 272 1.3E-9 T 01-11-2018 IPR000709 Leu/Ile/Val-binding protein GO:0006865 CDA09_00770 30f9093f418d4f13768c6d07f3f688ff 384 PRINTS PR00337 Leu/Ile/Val-binding protein family signature 47 63 1.3E-9 T 01-11-2018 IPR000709 Leu/Ile/Val-binding protein GO:0006865 CDA09_00770 30f9093f418d4f13768c6d07f3f688ff 384 Gene3D G3DSA:3.40.50.2300 27 324 2.3E-100 T 01-11-2018 CDA09_00770 30f9093f418d4f13768c6d07f3f688ff 384 Gene3D G3DSA:3.40.50.2300 143 274 2.3E-100 T 01-11-2018 CDA09_00770 30f9093f418d4f13768c6d07f3f688ff 384 SUPERFAMILY SSF53822 25 379 1.78E-88 T 01-11-2018 IPR028082 Periplasmic binding protein-like I CDA09_12110 921db23d508c4b62ee73e32a915ab088 259 Gene3D G3DSA:1.10.12.10 201 258 2.4E-15 T 01-11-2018 IPR014748 Enoyl-CoA hydratase, C-terminal CDA09_12110 921db23d508c4b62ee73e32a915ab088 259 SUPERFAMILY SSF52096 4 258 2.67E-72 T 01-11-2018 IPR029045 ClpP/crotonase-like domain superfamily CDA09_12110 921db23d508c4b62ee73e32a915ab088 259 ProSitePatterns PS00166 Enoyl-CoA hydratase/isomerase signature. 100 120 - T 01-11-2018 IPR018376 Enoyl-CoA hydratase/isomerase, conserved site GO:0003824 CDA09_12110 921db23d508c4b62ee73e32a915ab088 259 Pfam PF00378 Enoyl-CoA hydratase/isomerase 15 258 1.5E-51 T 01-11-2018 IPR001753 Enoyl-CoA hydratase/isomerase GO:0003824 CDA09_12110 921db23d508c4b62ee73e32a915ab088 259 Gene3D G3DSA:3.90.226.10 6 199 1.1E-55 T 01-11-2018 CDA09_16270 be5ec10c05d3f501725f2a43eef94170 277 TIGRFAM TIGR01496 DHPS: dihydropteroate synthase 18 271 1.3E-96 T 01-11-2018 IPR006390 Dihydropteroate synthase GO:0004156|GO:0009396 KEGG: 00790+2.5.1.15|MetaCyc: PWY-6614 CDA09_16270 be5ec10c05d3f501725f2a43eef94170 277 Gene3D G3DSA:3.20.20.20 1 275 3.6E-104 T 01-11-2018 IPR011005 Dihydropteroate synthase-like GO:0044237 Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 CDA09_16270 be5ec10c05d3f501725f2a43eef94170 277 Pfam PF00809 Pterin binding enzyme 19 257 4.7E-80 T 01-11-2018 IPR000489 Pterin-binding domain GO:0042558 Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 CDA09_16270 be5ec10c05d3f501725f2a43eef94170 277 SUPERFAMILY SSF51717 5 272 8.63E-99 T 01-11-2018 IPR011005 Dihydropteroate synthase-like GO:0044237 Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 CDA09_16270 be5ec10c05d3f501725f2a43eef94170 277 ProSitePatterns PS00793 Dihydropteroate synthase signature 2. 52 65 - T 01-11-2018 IPR000489 Pterin-binding domain GO:0042558 Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 CDA09_14340 624d6a77df9438047f72230a0b5f4109 412 Pfam PF08669 Glycine cleavage T-protein C-terminal barrel domain 315 401 2.6E-15 T 01-11-2018 IPR013977 Glycine cleavage T-protein, C-terminal barrel domain KEGG: 00260+2.1.2.10|KEGG: 00670+2.1.2.10 CDA09_14340 624d6a77df9438047f72230a0b5f4109 412 Hamap MF_00259 Aminomethyltransferase [gcvT]. 53 407 43.541 T 01-11-2018 IPR022903 Glycine cleavage system T protein, bacteria GO:0004047|GO:0006546 KEGG: 00260+2.1.2.10|KEGG: 00670+2.1.2.10 CDA09_14340 624d6a77df9438047f72230a0b5f4109 412 PIRSF PIRSF006487 27 410 4.0E-81 T 01-11-2018 IPR028896 Aminomethyltransferase-like KEGG: 00260+2.1.2.10|KEGG: 00670+2.1.2.10|Reactome: R-HSA-6783984 CDA09_14340 624d6a77df9438047f72230a0b5f4109 412 SUPERFAMILY SSF101790 324 408 9.48E-21 T 01-11-2018 IPR029043 Glycine cleavage T-protein/YgfZ, C-terminal CDA09_14340 624d6a77df9438047f72230a0b5f4109 412 TIGRFAM TIGR00528 gcvT: glycine cleavage system T protein 55 407 3.2E-117 T 01-11-2018 IPR006223 Glycine cleavage system T protein GO:0004047|GO:0006546 KEGG: 00260+2.1.2.10|KEGG: 00670+2.1.2.10|Reactome: R-HSA-6783984 CDA09_14340 624d6a77df9438047f72230a0b5f4109 412 Gene3D G3DSA:4.10.1250.10 285 327 4.2E-19 T 01-11-2018 CDA09_14340 624d6a77df9438047f72230a0b5f4109 412 Pfam PF01571 Aminomethyltransferase folate-binding domain 59 307 6.4E-86 T 01-11-2018 IPR006222 Aminomethyltransferase, folate-binding domain CDA09_14340 624d6a77df9438047f72230a0b5f4109 412 Gene3D G3DSA:2.40.30.110 328 412 3.8E-26 T 01-11-2018 CDA09_14340 624d6a77df9438047f72230a0b5f4109 412 SUPERFAMILY SSF103025 55 325 2.24E-91 T 01-11-2018 CDA09_14340 624d6a77df9438047f72230a0b5f4109 412 Gene3D G3DSA:3.30.70.1400 103 190 3.0E-83 T 01-11-2018 CDA09_14340 624d6a77df9438047f72230a0b5f4109 412 Gene3D G3DSA:3.30.1360.120 58 284 3.0E-83 T 01-11-2018 IPR027266 GTP-binding protein TrmE/Glycine cleavage system T protein, domain 1 GO:0005515 CDA09_06165 e5a06f3e2a96241d1a851a3eaea5a003 150 Pfam PF11304 Protein of unknown function (DUF3106) 30 129 7.4E-34 T 01-11-2018 IPR021455 Protein of unknown function DUF3106 CDA09_17155 bc9f13cc5cac7ed2dd01d40c74e3c1de 415 SUPERFAMILY SSF56645 1 260 1.13E-64 T 01-11-2018 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain superfamily GO:0016627|GO:0055114 CDA09_17155 bc9f13cc5cac7ed2dd01d40c74e3c1de 415 Pfam PF00441 Acyl-CoA dehydrogenase, C-terminal domain 247 396 6.2E-37 T 01-11-2018 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal GO:0016627|GO:0055114 CDA09_17155 bc9f13cc5cac7ed2dd01d40c74e3c1de 415 Gene3D G3DSA:1.10.540.10 1 131 1.9E-38 T 01-11-2018 IPR037069 Acyl-CoA dehydrogenase/oxidase, N-terminal domain superfamily GO:0016627|GO:0050660|GO:0055114 CDA09_17155 bc9f13cc5cac7ed2dd01d40c74e3c1de 415 Gene3D G3DSA:2.40.110.10 132 247 9.8E-47 T 01-11-2018 CDA09_17155 bc9f13cc5cac7ed2dd01d40c74e3c1de 415 Gene3D G3DSA:1.20.140.10 248 407 8.2E-38 T 01-11-2018 CDA09_17155 bc9f13cc5cac7ed2dd01d40c74e3c1de 415 SUPERFAMILY SSF47203 245 400 2.42E-43 T 01-11-2018 IPR036250 Acyl-CoA dehydrogenase-like, C-terminal GO:0016627|GO:0055114 CDA09_17155 bc9f13cc5cac7ed2dd01d40c74e3c1de 415 Pfam PF02770 Acyl-CoA dehydrogenase, middle domain 133 235 3.3E-20 T 01-11-2018 IPR006091 Acyl-CoA oxidase/dehydrogenase, central domain GO:0016627|GO:0055114 CDA09_17155 bc9f13cc5cac7ed2dd01d40c74e3c1de 415 Pfam PF02771 Acyl-CoA dehydrogenase, N-terminal domain 6 128 2.6E-11 T 01-11-2018 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal GO:0016627|GO:0050660|GO:0055114 CDA09_11805 59e540d955d44747fe9b6da8cb4456d9 402 Gene3D G3DSA:3.40.47.10 8 281 1.3E-144 T 01-11-2018 IPR016039 Thiolase-like GO:0003824 CDA09_11805 59e540d955d44747fe9b6da8cb4456d9 402 Pfam PF02803 Thiolase, C-terminal domain 276 399 9.0E-46 T 01-11-2018 IPR020617 Thiolase, C-terminal GO:0016747 CDA09_11805 59e540d955d44747fe9b6da8cb4456d9 402 ProSitePatterns PS00737 Thiolases signature 2. 346 362 - T 01-11-2018 IPR020613 Thiolase, conserved site GO:0016747 CDA09_11805 59e540d955d44747fe9b6da8cb4456d9 402 PIRSF PIRSF000429 1 401 1.3E-127 T 01-11-2018 IPR002155 Thiolase GO:0016747 CDA09_11805 59e540d955d44747fe9b6da8cb4456d9 402 Gene3D G3DSA:3.40.47.10 140 397 1.3E-144 T 01-11-2018 IPR016039 Thiolase-like GO:0003824 CDA09_11805 59e540d955d44747fe9b6da8cb4456d9 402 SUPERFAMILY SSF53901 276 399 4.24E-45 T 01-11-2018 IPR016039 Thiolase-like GO:0003824 CDA09_11805 59e540d955d44747fe9b6da8cb4456d9 402 TIGRFAM TIGR01930 AcCoA-C-Actrans: acetyl-CoA C-acyltransferase 7 398 4.9E-128 T 01-11-2018 IPR002155 Thiolase GO:0016747 CDA09_11805 59e540d955d44747fe9b6da8cb4456d9 402 ProSitePatterns PS00099 Thiolases active site. 381 394 - T 01-11-2018 IPR020610 Thiolase, active site GO:0016747 CDA09_11805 59e540d955d44747fe9b6da8cb4456d9 402 Pfam PF00108 Thiolase, N-terminal domain 8 266 1.8E-65 T 01-11-2018 IPR020616 Thiolase, N-terminal GO:0016747 CDA09_11805 59e540d955d44747fe9b6da8cb4456d9 402 SUPERFAMILY SSF53901 3 273 3.76E-67 T 01-11-2018 IPR016039 Thiolase-like GO:0003824 CDA09_11805 59e540d955d44747fe9b6da8cb4456d9 402 ProSitePatterns PS00098 Thiolases acyl-enzyme intermediate signature. 85 103 - T 01-11-2018 IPR020615 Thiolase, acyl-enzyme intermediate active site GO:0016747 CDA09_09210 bf0055444142360125016f5139ad4aa1 274 SMART SM00345 50 111 8.1E-20 T 01-11-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 CDA09_09210 bf0055444142360125016f5139ad4aa1 274 SUPERFAMILY SSF46785 39 119 1.07E-20 T 01-11-2018 IPR036390 Winged helix DNA-binding domain superfamily CDA09_09210 bf0055444142360125016f5139ad4aa1 274 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 69 83 6.8E-11 T 01-11-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 CDA09_09210 bf0055444142360125016f5139ad4aa1 274 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 83 99 6.8E-11 T 01-11-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 CDA09_09210 bf0055444142360125016f5139ad4aa1 274 Pfam PF07729 FCD domain 138 257 3.1E-16 T 01-11-2018 IPR011711 GntR, C-terminal CDA09_09210 bf0055444142360125016f5139ad4aa1 274 SUPERFAMILY SSF48008 136 263 6.02E-16 T 01-11-2018 IPR008920 Transcription regulator FadR/GntR, C-terminal CDA09_09210 bf0055444142360125016f5139ad4aa1 274 SMART SM00418 45 128 0.0074 T 01-11-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 CDA09_09210 bf0055444142360125016f5139ad4aa1 274 Gene3D G3DSA:1.20.120.530 134 267 7.9E-18 T 01-11-2018 IPR008920 Transcription regulator FadR/GntR, C-terminal CDA09_09210 bf0055444142360125016f5139ad4aa1 274 Pfam PF00392 Bacterial regulatory proteins, gntR family 48 105 8.1E-21 T 01-11-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 CDA09_09210 bf0055444142360125016f5139ad4aa1 274 Gene3D G3DSA:1.10.10.10 35 111 1.0E-21 T 01-11-2018 IPR036388 Winged helix-like DNA-binding domain superfamily CDA09_09210 bf0055444142360125016f5139ad4aa1 274 SMART SM00895 136 258 4.3E-14 T 01-11-2018 IPR011711 GntR, C-terminal CDA09_13110 81711c25eb7ad863cc8a696e65830558 471 Gene3D G3DSA:1.10.3720.10 236 467 5.4E-20 T 01-11-2018 IPR035906 MetI-like superfamily CDA09_13110 81711c25eb7ad863cc8a696e65830558 471 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 268 470 1.2E-24 T 01-11-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 CDA09_13110 81711c25eb7ad863cc8a696e65830558 471 SUPERFAMILY SSF161098 251 453 1.7E-16 T 01-11-2018 IPR035906 MetI-like superfamily CDA09_05145 3ffcf67ee327392c2b70c088ae3e0b48 291 Pfam PF08269 Cache domain 68 164 1.7E-13 T 01-11-2018 IPR004010 Double Cache domain 2 CDA09_05145 3ffcf67ee327392c2b70c088ae3e0b48 291 Pfam PF17200 Single Cache domain 2 165 288 1.8E-12 T 01-11-2018 IPR033480 Single Cache domain 2 CDA09_05145 3ffcf67ee327392c2b70c088ae3e0b48 291 SMART SM01049 31 114 0.0051 T 01-11-2018 IPR033480 Single Cache domain 2 CDA09_05145 3ffcf67ee327392c2b70c088ae3e0b48 291 SMART SM01049 163 243 2.7E-4 T 01-11-2018 IPR033480 Single Cache domain 2 CDA09_05145 3ffcf67ee327392c2b70c088ae3e0b48 291 Gene3D G3DSA:3.30.450.20 167 291 2.2E-18 T 01-11-2018 CDA09_05145 3ffcf67ee327392c2b70c088ae3e0b48 291 Gene3D G3DSA:3.30.450.20 50 166 1.9E-15 T 01-11-2018 CDA09_21875 b4a39dbabbe37896b630551501756d88 545 SMART SM00086 92 133 0.038 T 01-11-2018 IPR001610 PAC motif CDA09_21875 b4a39dbabbe37896b630551501756d88 545 SMART SM00086 261 302 55.0 T 01-11-2018 IPR001610 PAC motif CDA09_21875 b4a39dbabbe37896b630551501756d88 545 SUPERFAMILY SSF55874 392 545 2.75E-30 T 01-11-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily CDA09_21875 b4a39dbabbe37896b630551501756d88 545 Gene3D G3DSA:3.30.450.20 170 300 2.0E-16 T 01-11-2018 CDA09_21875 b4a39dbabbe37896b630551501756d88 545 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 181 307 2.2E-10 T 01-11-2018 IPR000014 PAS domain CDA09_21875 b4a39dbabbe37896b630551501756d88 545 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 22 140 3.1E-16 T 01-11-2018 IPR000014 PAS domain CDA09_21875 b4a39dbabbe37896b630551501756d88 545 PRINTS PR00344 Bacterial sensor protein C-terminal signature 507 525 1.1E-13 T 01-11-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 CDA09_21875 b4a39dbabbe37896b630551501756d88 545 PRINTS PR00344 Bacterial sensor protein C-terminal signature 478 492 1.1E-13 T 01-11-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 CDA09_21875 b4a39dbabbe37896b630551501756d88 545 PRINTS PR00344 Bacterial sensor protein C-terminal signature 531 544 1.1E-13 T 01-11-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 CDA09_21875 b4a39dbabbe37896b630551501756d88 545 PRINTS PR00344 Bacterial sensor protein C-terminal signature 496 506 1.1E-13 T 01-11-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 CDA09_21875 b4a39dbabbe37896b630551501756d88 545 SUPERFAMILY SSF55785 38 141 1.41E-16 T 01-11-2018 IPR035965 PAS domain superfamily CDA09_21875 b4a39dbabbe37896b630551501756d88 545 Pfam PF13188 PAS domain 184 220 1.8E-4 T 01-11-2018 IPR000014 PAS domain CDA09_21875 b4a39dbabbe37896b630551501756d88 545 Pfam PF13426 PAS domain 30 132 2.1E-7 T 01-11-2018 IPR000014 PAS domain CDA09_21875 b4a39dbabbe37896b630551501756d88 545 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 439 544 1.4E-13 T 01-11-2018 IPR003594 Histidine kinase/HSP90-like ATPase CDA09_21875 b4a39dbabbe37896b630551501756d88 545 Gene3D G3DSA:1.10.287.130 329 390 2.5E-6 T 01-11-2018 CDA09_21875 b4a39dbabbe37896b630551501756d88 545 Gene3D G3DSA:3.30.450.20 19 136 2.5E-26 T 01-11-2018 CDA09_21875 b4a39dbabbe37896b630551501756d88 545 Gene3D G3DSA:3.30.565.10 392 545 9.5E-33 T 01-11-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily CDA09_21875 b4a39dbabbe37896b630551501756d88 545 SMART SM00387 435 545 1.1E-18 T 01-11-2018 IPR003594 Histidine kinase/HSP90-like ATPase CDA09_21875 b4a39dbabbe37896b630551501756d88 545 SUPERFAMILY SSF55785 170 300 1.27E-14 T 01-11-2018 IPR035965 PAS domain superfamily CDA09_02060 0639ef61ab36d18d200dca118bc80194 205 Gene3D G3DSA:1.10.760.10 89 183 4.8E-23 T 01-11-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 CDA09_02060 0639ef61ab36d18d200dca118bc80194 205 SUPERFAMILY SSF46626 87 182 8.7E-12 T 01-11-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 CDA09_02060 0639ef61ab36d18d200dca118bc80194 205 Pfam PF03150 Di-haem cytochrome c peroxidase 94 123 1.1E-5 T 01-11-2018 IPR004852 Di-haem cytochrome c peroxidase GO:0016491|GO:0055114 CDA09_16305 1cdbe80e7238552e33fbaecc0aa95cab 268 SUPERFAMILY SSF51735 3 267 4.41E-48 T 01-11-2018 IPR036291 NAD(P)-binding domain superfamily CDA09_16305 1cdbe80e7238552e33fbaecc0aa95cab 268 Gene3D G3DSA:3.40.50.720 5 264 8.5E-98 T 01-11-2018 CDA09_16305 1cdbe80e7238552e33fbaecc0aa95cab 268 SUPERFAMILY SSF55347 128 237 3.49E-36 T 01-11-2018 CDA09_16305 1cdbe80e7238552e33fbaecc0aa95cab 268 ProSitePatterns PS01298 Dihydrodipicolinate reductase signature. 151 168 - T 01-11-2018 IPR022664 Dihydrodipicolinate reductase, conserved site GO:0008839|GO:0009089|GO:0055114 KEGG: 00261+1.17.1.8|KEGG: 00300+1.17.1.8|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097 CDA09_16305 1cdbe80e7238552e33fbaecc0aa95cab 268 PIRSF PIRSF000161 2 268 1.4E-80 T 01-11-2018 IPR023940 Dihydrodipicolinate reductase GO:0008839|GO:0009089|GO:0055114 KEGG: 00261+1.17.1.8|KEGG: 00300+1.17.1.8|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097 CDA09_16305 1cdbe80e7238552e33fbaecc0aa95cab 268 Hamap MF_00102 4-hydroxy-tetrahydrodipicolinate reductase [dapB]. 4 266 34.31 T 01-11-2018 IPR023940 Dihydrodipicolinate reductase GO:0008839|GO:0009089|GO:0055114 KEGG: 00261+1.17.1.8|KEGG: 00300+1.17.1.8|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097 CDA09_16305 1cdbe80e7238552e33fbaecc0aa95cab 268 Pfam PF01113 Dihydrodipicolinate reductase, N-terminus 5 126 5.6E-37 T 01-11-2018 IPR000846 Dihydrodipicolinate reductase, N-terminal GO:0008839|GO:0009089|GO:0055114 KEGG: 00261+1.17.1.8|KEGG: 00300+1.17.1.8|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097 CDA09_16305 1cdbe80e7238552e33fbaecc0aa95cab 268 Gene3D G3DSA:3.30.360.10 128 235 8.5E-98 T 01-11-2018 CDA09_16305 1cdbe80e7238552e33fbaecc0aa95cab 268 TIGRFAM TIGR00036 dapB: 4-hydroxy-tetrahydrodipicolinate reductase 4 266 3.2E-94 T 01-11-2018 IPR023940 Dihydrodipicolinate reductase GO:0008839|GO:0009089|GO:0055114 KEGG: 00261+1.17.1.8|KEGG: 00300+1.17.1.8|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097 CDA09_16305 1cdbe80e7238552e33fbaecc0aa95cab 268 Pfam PF05173 Dihydrodipicolinate reductase, C-terminus 129 265 9.0E-41 T 01-11-2018 IPR022663 Dihydrodipicolinate reductase, C-terminal GO:0008839|GO:0009089|GO:0055114 KEGG: 00261+1.17.1.8|KEGG: 00300+1.17.1.8|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097 CDA09_08925 c10549f669db7df58c2da944b7a80502 510 Gene3D G3DSA:3.20.130.10 308 493 7.6E-59 T 01-11-2018 IPR036660 Fe-S hydro-lyase, tartrate dehydratase beta-type, catalytic domain superfamily GO:0016836 CDA09_08925 c10549f669db7df58c2da944b7a80502 510 SUPERFAMILY SSF117457 321 491 2.75E-61 T 01-11-2018 IPR036660 Fe-S hydro-lyase, tartrate dehydratase beta-type, catalytic domain superfamily GO:0016836 CDA09_08925 c10549f669db7df58c2da944b7a80502 510 PIRSF PIRSF001394 1 510 2.8E-220 T 01-11-2018 IPR011167 Iron-dependent fumarate hydratase GO:0004333|GO:0006091 KEGG: 00020+4.2.1.2|KEGG: 00620+4.2.1.2|KEGG: 00720+4.2.1.2|MetaCyc: PWY-5392|MetaCyc: PWY-561|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7254|MetaCyc: PWY-7384 CDA09_08925 c10549f669db7df58c2da944b7a80502 510 TIGRFAM TIGR00722 ttdA_fumA_fumB: hydrolyase, tartrate alpha subunit/fumarate domain protein, Fe-S type 12 286 6.5E-65 T 01-11-2018 IPR004646 Fe-S hydro-lyase, tartrate dehydratase alpha-type, catalytic domain GO:0016829 CDA09_08925 c10549f669db7df58c2da944b7a80502 510 Pfam PF05681 Fumarate hydratase (Fumerase) 11 288 6.1E-102 T 01-11-2018 IPR004646 Fe-S hydro-lyase, tartrate dehydratase alpha-type, catalytic domain GO:0016829 CDA09_08925 c10549f669db7df58c2da944b7a80502 510 Pfam PF05683 Fumarase C-terminus 292 493 1.1E-81 T 01-11-2018 IPR004647 Fe-S hydro-lyase, tartrate dehydratase beta-type, catalytic domain GO:0016836 CDA09_08925 c10549f669db7df58c2da944b7a80502 510 TIGRFAM TIGR00723 ttdB_fumA_fumB: hydrolyase, tartrate beta subunit/fumarate domain protein, Fe-S type 330 491 2.4E-48 T 01-11-2018 IPR004647 Fe-S hydro-lyase, tartrate dehydratase beta-type, catalytic domain GO:0016836 CDA09_17215 98834a7ca7ab5ebba939b4a29b1c9771 196 Pfam PF13091 PLD-like domain 52 172 2.1E-19 T 01-11-2018 IPR025202 Phospholipase D-like domain Reactome: R-HSA-1483148|Reactome: R-HSA-1483166 CDA09_17215 98834a7ca7ab5ebba939b4a29b1c9771 196 SUPERFAMILY SSF56024 39 186 1.66E-27 T 01-11-2018 CDA09_17215 98834a7ca7ab5ebba939b4a29b1c9771 196 Gene3D G3DSA:3.30.870.10 27 186 1.2E-33 T 01-11-2018 CDA09_10805 f2b8d7281c24bb1eda97ed01635779aa 280 SUPERFAMILY SSF53474 20 275 2.06E-35 T 01-11-2018 IPR029058 Alpha/Beta hydrolase fold CDA09_10805 f2b8d7281c24bb1eda97ed01635779aa 280 PIRSF PIRSF017388 7 278 2.1E-53 T 01-11-2018 IPR012354 Esterase/lipase GO:0052689 CDA09_10805 f2b8d7281c24bb1eda97ed01635779aa 280 Pfam PF12146 Serine aminopeptidase, S33 24 262 5.3E-24 T 01-11-2018 IPR022742 Serine aminopeptidase, S33 CDA09_10805 f2b8d7281c24bb1eda97ed01635779aa 280 Gene3D G3DSA:3.40.50.1820 5 276 3.2E-49 T 01-11-2018 IPR029058 Alpha/Beta hydrolase fold CDA09_10885 f9ec753900b20c75c42a769885132089 389 Gene3D G3DSA:1.10.10.60 227 333 1.4E-33 T 01-11-2018 CDA09_10885 f9ec753900b20c75c42a769885132089 389 SUPERFAMILY SSF46689 231 280 8.24E-8 T 01-11-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 CDA09_10885 f9ec753900b20c75c42a769885132089 389 SUPERFAMILY SSF46689 283 330 2.15E-10 T 01-11-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 CDA09_10885 f9ec753900b20c75c42a769885132089 389 Gene3D G3DSA:3.40.50.880 19 219 6.4E-56 T 01-11-2018 IPR029062 Class I glutamine amidotransferase-like CDA09_10885 f9ec753900b20c75c42a769885132089 389 Pfam PF12833 Helix-turn-helix domain 253 330 4.0E-22 T 01-11-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 CDA09_10885 f9ec753900b20c75c42a769885132089 389 SUPERFAMILY SSF52317 22 212 2.12E-46 T 01-11-2018 IPR029062 Class I glutamine amidotransferase-like CDA09_10885 f9ec753900b20c75c42a769885132089 389 Pfam PF01965 DJ-1/PfpI family 38 190 2.5E-16 T 01-11-2018 IPR002818 DJ-1/PfpI Reactome: R-HSA-3899300 CDA09_10885 f9ec753900b20c75c42a769885132089 389 SMART SM00342 247 330 7.3E-27 T 01-11-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 CDA09_10085 cef07555c2d6575c00692de4875e7af1 387 Gene3D G3DSA:1.10.540.10 1 120 8.5E-30 T 01-11-2018 IPR037069 Acyl-CoA dehydrogenase/oxidase, N-terminal domain superfamily GO:0016627|GO:0050660|GO:0055114 CDA09_10085 cef07555c2d6575c00692de4875e7af1 387 Pfam PF02770 Acyl-CoA dehydrogenase, middle domain 127 199 6.3E-11 T 01-11-2018 IPR006091 Acyl-CoA oxidase/dehydrogenase, central domain GO:0016627|GO:0055114 CDA09_10085 cef07555c2d6575c00692de4875e7af1 387 SUPERFAMILY SSF56645 1 223 2.62E-45 T 01-11-2018 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain superfamily GO:0016627|GO:0055114 CDA09_10085 cef07555c2d6575c00692de4875e7af1 387 SUPERFAMILY SSF47203 223 378 6.93E-38 T 01-11-2018 IPR036250 Acyl-CoA dehydrogenase-like, C-terminal GO:0016627|GO:0055114 CDA09_10085 cef07555c2d6575c00692de4875e7af1 387 Pfam PF00441 Acyl-CoA dehydrogenase, C-terminal domain 225 354 9.4E-29 T 01-11-2018 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal GO:0016627|GO:0055114 CDA09_10085 cef07555c2d6575c00692de4875e7af1 387 Gene3D G3DSA:2.40.110.10 123 228 5.7E-21 T 01-11-2018 CDA09_10085 cef07555c2d6575c00692de4875e7af1 387 Pfam PF02771 Acyl-CoA dehydrogenase, N-terminal domain 6 118 3.2E-18 T 01-11-2018 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal GO:0016627|GO:0050660|GO:0055114 CDA09_10085 cef07555c2d6575c00692de4875e7af1 387 Gene3D G3DSA:1.20.140.10 229 375 1.4E-34 T 01-11-2018 CDA09_12455 c8c5933b874c617e5fb272754dc0879e 545 SUPERFAMILY SSF54373 210 305 7.06E-38 T 01-11-2018 CDA09_12455 c8c5933b874c617e5fb272754dc0879e 545 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 9 31 1.8E-6 T 01-11-2018 CDA09_12455 c8c5933b874c617e5fb272754dc0879e 545 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 178 193 1.8E-6 T 01-11-2018 CDA09_12455 c8c5933b874c617e5fb272754dc0879e 545 Gene3D G3DSA:3.30.70.20 447 540 3.8E-40 T 01-11-2018 CDA09_12455 c8c5933b874c617e5fb272754dc0879e 545 SUPERFAMILY SSF51905 1 444 6.02E-55 T 01-11-2018 IPR036188 FAD/NAD(P)-binding domain superfamily CDA09_12455 c8c5933b874c617e5fb272754dc0879e 545 Pfam PF13450 NAD(P)-binding Rossmann-like domain 12 57 3.7E-7 T 01-11-2018 CDA09_12455 c8c5933b874c617e5fb272754dc0879e 545 SUPERFAMILY SSF54862 446 544 8.38E-29 T 01-11-2018 CDA09_12455 c8c5933b874c617e5fb272754dc0879e 545 Gene3D G3DSA:3.30.9.90 79 446 1.4E-197 T 01-11-2018 CDA09_12455 c8c5933b874c617e5fb272754dc0879e 545 Gene3D G3DSA:3.50.50.60 7 384 1.4E-197 T 01-11-2018 IPR036188 FAD/NAD(P)-binding domain superfamily CDA09_12455 c8c5933b874c617e5fb272754dc0879e 545 Pfam PF05187 Electron transfer flavoprotein-ubiquinone oxidoreductase, 4Fe-4S 442 543 3.5E-51 T 01-11-2018 CDA09_14350 7c2420b5cfdce518e4c191f0f6edeaeb 968 Hamap MF_00711 Glycine dehydrogenase (decarboxylating) [gcvP]. 17 966 25.391 T 01-11-2018 IPR003437 Glycine dehydrogenase (decarboxylating) GO:0004375|GO:0006544|GO:0055114 KEGG: 00260+1.4.4.2|Reactome: R-HSA-6783984 CDA09_14350 7c2420b5cfdce518e4c191f0f6edeaeb 968 TIGRFAM TIGR00461 gcvP: glycine dehydrogenase 26 960 0.0 T 01-11-2018 IPR003437 Glycine dehydrogenase (decarboxylating) GO:0004375|GO:0006544|GO:0055114 KEGG: 00260+1.4.4.2|Reactome: R-HSA-6783984 CDA09_14350 7c2420b5cfdce518e4c191f0f6edeaeb 968 Gene3D G3DSA:3.90.1150.10 775 913 1.5E-40 T 01-11-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 CDA09_14350 7c2420b5cfdce518e4c191f0f6edeaeb 968 Gene3D G3DSA:3.40.640.10 104 362 6.0E-102 T 01-11-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 CDA09_14350 7c2420b5cfdce518e4c191f0f6edeaeb 968 Gene3D G3DSA:3.40.640.10 530 763 3.0E-59 T 01-11-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 CDA09_14350 7c2420b5cfdce518e4c191f0f6edeaeb 968 Pfam PF02347 Glycine cleavage system P-protein 467 736 3.9E-9 T 01-11-2018 IPR020581 Glycine cleavage system P protein GO:0004375|GO:0006546|GO:0055114 KEGG: 00260+1.4.4.2|Reactome: R-HSA-6783984 CDA09_14350 7c2420b5cfdce518e4c191f0f6edeaeb 968 Pfam PF02347 Glycine cleavage system P-protein 26 448 8.7E-175 T 01-11-2018 IPR020581 Glycine cleavage system P protein GO:0004375|GO:0006546|GO:0055114 KEGG: 00260+1.4.4.2|Reactome: R-HSA-6783984 CDA09_14350 7c2420b5cfdce518e4c191f0f6edeaeb 968 SUPERFAMILY SSF53383 478 961 1.5E-98 T 01-11-2018 IPR015424 Pyridoxal phosphate-dependent transferase CDA09_14350 7c2420b5cfdce518e4c191f0f6edeaeb 968 SUPERFAMILY SSF53383 26 448 2.04E-102 T 01-11-2018 IPR015424 Pyridoxal phosphate-dependent transferase CDA09_04050 6acbcf9735a88cb6ad55fa4a4ee33cda 271 Pfam PF06827 Zinc finger found in FPG and IleRS 242 269 6.8E-8 T 01-11-2018 IPR010663 Zinc finger, FPG/IleRS-type Reactome: R-HSA-379726 CDA09_04050 6acbcf9735a88cb6ad55fa4a4ee33cda 271 Gene3D G3DSA:1.10.8.50 141 270 3.0E-45 T 01-11-2018 CDA09_04050 6acbcf9735a88cb6ad55fa4a4ee33cda 271 Hamap MF_00103 Formamidopyrimidine-DNA glycosylase [mutM]. 1 270 41.436 T 01-11-2018 IPR020629 Formamidopyrimidine-DNA glycosylase GO:0003906|GO:0006281|GO:0008270|GO:0008534 CDA09_04050 6acbcf9735a88cb6ad55fa4a4ee33cda 271 SUPERFAMILY SSF81624 2 139 5.89E-36 T 01-11-2018 IPR035937 MutM-like, N-terminal CDA09_04050 6acbcf9735a88cb6ad55fa4a4ee33cda 271 SUPERFAMILY SSF46946 131 222 7.51E-27 T 01-11-2018 IPR010979 Ribosomal protein S13-like, H2TH GO:0003676 CDA09_04050 6acbcf9735a88cb6ad55fa4a4ee33cda 271 TIGRFAM TIGR00577 fpg: DNA-formamidopyrimidine glycosylase 1 269 5.2E-80 T 01-11-2018 IPR020629 Formamidopyrimidine-DNA glycosylase GO:0003906|GO:0006281|GO:0008270|GO:0008534 CDA09_04050 6acbcf9735a88cb6ad55fa4a4ee33cda 271 SMART SM00898 2 115 7.7E-46 T 01-11-2018 IPR012319 Formamidopyrimidine-DNA glycosylase, catalytic domain GO:0003684|GO:0003906|GO:0006284|GO:0008270|GO:0016799 CDA09_04050 6acbcf9735a88cb6ad55fa4a4ee33cda 271 ProSitePatterns PS01242 Zinc finger FPG-type signature. 245 269 - T 01-11-2018 IPR015887 DNA glycosylase/AP lyase, zinc finger domain, DNA-binding site GO:0003677|GO:0003906|GO:0006281|GO:0008270|GO:0016799 CDA09_04050 6acbcf9735a88cb6ad55fa4a4ee33cda 271 Pfam PF06831 Formamidopyrimidine-DNA glycosylase H2TH domain 130 219 8.0E-21 T 01-11-2018 IPR015886 DNA glycosylase/AP lyase, H2TH DNA-binding GO:0003684|GO:0003906|GO:0006289|GO:0008270|GO:0016799 CDA09_04050 6acbcf9735a88cb6ad55fa4a4ee33cda 271 SMART SM01232 130 222 6.4E-45 T 01-11-2018 IPR015886 DNA glycosylase/AP lyase, H2TH DNA-binding GO:0003684|GO:0003906|GO:0006289|GO:0008270|GO:0016799 CDA09_04050 6acbcf9735a88cb6ad55fa4a4ee33cda 271 Gene3D G3DSA:3.20.190.10 2 125 1.2E-32 T 01-11-2018 IPR035937 MutM-like, N-terminal CDA09_04050 6acbcf9735a88cb6ad55fa4a4ee33cda 271 SUPERFAMILY SSF57716 218 269 2.51E-16 T 01-11-2018 CDA09_04050 6acbcf9735a88cb6ad55fa4a4ee33cda 271 Pfam PF01149 Formamidopyrimidine-DNA glycosylase N-terminal domain 1 113 3.0E-29 T 01-11-2018 IPR012319 Formamidopyrimidine-DNA glycosylase, catalytic domain GO:0003684|GO:0003906|GO:0006284|GO:0008270|GO:0016799 CDA09_04310 f009f5fd3f9eea942d392e433d39fd06 249 TIGRFAM TIGR00007 TIGR00007: 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)methylideneamino]imidazole-4-carboxamide isomerase 3 235 7.4E-77 T 01-11-2018 IPR006063 Phosphoribosylformimino-5-aminoimidazole carboxamide ribotide isomerase HisA GO:0000105|GO:0003949 KEGG: 00340+5.3.1.16 CDA09_04310 f009f5fd3f9eea942d392e433d39fd06 249 Pfam PF00977 Histidine biosynthesis protein 3 232 4.2E-78 T 01-11-2018 IPR006062 Histidine biosynthesis GO:0000105 CDA09_04310 f009f5fd3f9eea942d392e433d39fd06 249 Hamap MF_01014 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)methylideneamino] imidazole-4-carboxamide isomerase [hisA]. 2 240 35.805 T 01-11-2018 IPR023016 Phosphoribosylformimino-5-aminoimidazole carboxamide ribotide isomerase GO:0000105|GO:0003949 KEGG: 00340+5.3.1.16 CDA09_04310 f009f5fd3f9eea942d392e433d39fd06 249 SUPERFAMILY SSF51366 1 238 2.51E-73 T 01-11-2018 IPR011060 Ribulose-phosphate binding barrel GO:0003824 CDA09_04310 f009f5fd3f9eea942d392e433d39fd06 249 Gene3D G3DSA:3.20.20.70 1 242 2.5E-85 T 01-11-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 CDA09_11235 bc4ed0805ad7d0a0827589151ce0e844 1009 Gene3D G3DSA:2.40.30.110 914 1008 2.9E-9 T 01-11-2018 CDA09_11235 bc4ed0805ad7d0a0827589151ce0e844 1009 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 173 192 1.6E-7 T 01-11-2018 CDA09_11235 bc4ed0805ad7d0a0827589151ce0e844 1009 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 287 305 1.6E-7 T 01-11-2018 CDA09_11235 bc4ed0805ad7d0a0827589151ce0e844 1009 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 172 435 2.7E-10 T 01-11-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 CDA09_11235 bc4ed0805ad7d0a0827589151ce0e844 1009 Pfam PF13510 2Fe-2S iron-sulfur cluster binding domain 17 102 4.9E-23 T 01-11-2018 CDA09_11235 bc4ed0805ad7d0a0827589151ce0e844 1009 Pfam PF08669 Glycine cleavage T-protein C-terminal barrel domain 899 995 1.0E-15 T 01-11-2018 IPR013977 Glycine cleavage T-protein, C-terminal barrel domain KEGG: 00260+2.1.2.10|KEGG: 00670+2.1.2.10 CDA09_11235 bc4ed0805ad7d0a0827589151ce0e844 1009 Pfam PF01571 Aminomethyltransferase folate-binding domain 623 889 1.9E-77 T 01-11-2018 IPR006222 Aminomethyltransferase, folate-binding domain CDA09_11235 bc4ed0805ad7d0a0827589151ce0e844 1009 SUPERFAMILY SSF101790 909 1007 6.38E-20 T 01-11-2018 IPR029043 Glycine cleavage T-protein/YgfZ, C-terminal CDA09_11235 bc4ed0805ad7d0a0827589151ce0e844 1009 Gene3D G3DSA:3.30.70.1400 676 904 2.2E-89 T 01-11-2018 CDA09_11235 bc4ed0805ad7d0a0827589151ce0e844 1009 PIRSF PIRSF037980 1 1009 0.0 T 01-11-2018 IPR006277 Sarcosine oxidase, alpha subunit GO:0008115|GO:0046653 KEGG: 00260+1.5.3.1|MetaCyc: PWY-3661|MetaCyc: PWY-4722 CDA09_11235 bc4ed0805ad7d0a0827589151ce0e844 1009 Gene3D G3DSA:3.50.50.60 172 596 1.3E-79 T 01-11-2018 IPR036188 FAD/NAD(P)-binding domain superfamily CDA09_11235 bc4ed0805ad7d0a0827589151ce0e844 1009 Gene3D G3DSA:3.30.1360.120 619 878 2.2E-89 T 01-11-2018 IPR027266 GTP-binding protein TrmE/Glycine cleavage system T protein, domain 1 GO:0005515 CDA09_11235 bc4ed0805ad7d0a0827589151ce0e844 1009 TIGRFAM TIGR01372 soxA: sarcosine oxidase, alpha subunit family 2 1009 0.0 T 01-11-2018 IPR006277 Sarcosine oxidase, alpha subunit GO:0008115|GO:0046653 KEGG: 00260+1.5.3.1|MetaCyc: PWY-3661|MetaCyc: PWY-4722 CDA09_11235 bc4ed0805ad7d0a0827589151ce0e844 1009 SUPERFAMILY SSF51905 167 466 1.73E-31 T 01-11-2018 IPR036188 FAD/NAD(P)-binding domain superfamily CDA09_11235 bc4ed0805ad7d0a0827589151ce0e844 1009 Gene3D G3DSA:1.10.10.1100 514 591 1.3E-79 T 01-11-2018 CDA09_11235 bc4ed0805ad7d0a0827589151ce0e844 1009 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 377 393 4.9E-11 T 01-11-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 CDA09_11235 bc4ed0805ad7d0a0827589151ce0e844 1009 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 470 489 4.9E-11 T 01-11-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 CDA09_11235 bc4ed0805ad7d0a0827589151ce0e844 1009 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 172 194 4.9E-11 T 01-11-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 CDA09_11235 bc4ed0805ad7d0a0827589151ce0e844 1009 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 288 296 4.9E-11 T 01-11-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 CDA09_11235 bc4ed0805ad7d0a0827589151ce0e844 1009 Gene3D G3DSA:3.50.50.60 299 427 1.3E-79 T 01-11-2018 IPR036188 FAD/NAD(P)-binding domain superfamily CDA09_11235 bc4ed0805ad7d0a0827589151ce0e844 1009 SUPERFAMILY SSF103025 617 906 1.57E-95 T 01-11-2018 CDA09_15145 b643d657f0991eb2331d5f353786060e 234 SUPERFAMILY SSF54427 93 226 7.89E-26 T 01-11-2018 IPR032710 NTF2-like domain superfamily CDA09_15145 b643d657f0991eb2331d5f353786060e 234 Pfam PF04335 VirB8 protein 23 225 1.6E-67 T 01-11-2018 IPR007430 Bacterial virulence protein VirB8 GO:0016020 CDA09_17575 aa552f4bed6fad01a42a5ef77afe4203 366 PIRSF PIRSF000525 1 366 1.8E-148 T 01-11-2018 IPR022278 Phosphoserine aminotransferase GO:0004648|GO:0006564 KEGG: 00260+2.6.1.52|KEGG: 00680+2.6.1.52|KEGG: 00750+2.6.1.52|Reactome: R-HSA-977347 CDA09_17575 aa552f4bed6fad01a42a5ef77afe4203 366 Hamap MF_00160 Phosphoserine aminotransferase [serC]. 2 365 49.983 T 01-11-2018 IPR022278 Phosphoserine aminotransferase GO:0004648|GO:0006564 KEGG: 00260+2.6.1.52|KEGG: 00680+2.6.1.52|KEGG: 00750+2.6.1.52|Reactome: R-HSA-977347 CDA09_17575 aa552f4bed6fad01a42a5ef77afe4203 366 TIGRFAM TIGR01364 serC_1: phosphoserine transaminase 4 364 2.1E-152 T 01-11-2018 IPR022278 Phosphoserine aminotransferase GO:0004648|GO:0006564 KEGG: 00260+2.6.1.52|KEGG: 00680+2.6.1.52|KEGG: 00750+2.6.1.52|Reactome: R-HSA-977347 CDA09_17575 aa552f4bed6fad01a42a5ef77afe4203 366 Gene3D G3DSA:3.40.640.10 17 263 9.4E-84 T 01-11-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 CDA09_17575 aa552f4bed6fad01a42a5ef77afe4203 366 SUPERFAMILY SSF53383 1 363 9.95E-108 T 01-11-2018 IPR015424 Pyridoxal phosphate-dependent transferase CDA09_17575 aa552f4bed6fad01a42a5ef77afe4203 366 Pfam PF00266 Aminotransferase class-V 4 354 5.6E-43 T 01-11-2018 IPR000192 Aminotransferase class V domain CDA09_17575 aa552f4bed6fad01a42a5ef77afe4203 366 Gene3D G3DSA:3.90.1150.10 264 366 5.7E-40 T 01-11-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 CDA09_07375 333c2c54bf8cb7af8837f01bf98136a3 303 Pfam PF13005 zinc-finger binding domain of transposase IS66 127 158 2.8E-9 T 01-11-2018 IPR024474 Zinc-finger binding domain of transposase IS66 CDA09_07375 333c2c54bf8cb7af8837f01bf98136a3 303 Pfam PF03050 Transposase IS66 family 178 300 2.0E-27 T 01-11-2018 IPR004291 Transposase, IS66 CDA09_07375 333c2c54bf8cb7af8837f01bf98136a3 303 Pfam PF13007 Transposase C of IS166 homeodomain 47 112 1.5E-11 T 01-11-2018 IPR024463 Transposase TnpC, homeodomain CDA09_10320 b6b406908b3fe5dbfe778b2d66885626 286 Gene3D G3DSA:3.40.50.1820 4 279 4.2E-107 T 01-11-2018 IPR029058 Alpha/Beta hydrolase fold CDA09_10320 b6b406908b3fe5dbfe778b2d66885626 286 PRINTS PR00111 Alpha/beta hydrolase fold signature 56 71 1.5E-27 T 01-11-2018 IPR000073 Alpha/beta hydrolase fold-1 CDA09_10320 b6b406908b3fe5dbfe778b2d66885626 286 PRINTS PR00111 Alpha/beta hydrolase fold signature 101 114 1.5E-27 T 01-11-2018 IPR000073 Alpha/beta hydrolase fold-1 CDA09_10320 b6b406908b3fe5dbfe778b2d66885626 286 PRINTS PR00111 Alpha/beta hydrolase fold signature 115 128 1.5E-27 T 01-11-2018 IPR000073 Alpha/beta hydrolase fold-1 CDA09_10320 b6b406908b3fe5dbfe778b2d66885626 286 PRINTS PR00111 Alpha/beta hydrolase fold signature 218 232 1.5E-27 T 01-11-2018 IPR000073 Alpha/beta hydrolase fold-1 CDA09_10320 b6b406908b3fe5dbfe778b2d66885626 286 SUPERFAMILY SSF53474 10 274 1.85E-64 T 01-11-2018 IPR029058 Alpha/Beta hydrolase fold CDA09_10320 b6b406908b3fe5dbfe778b2d66885626 286 Pfam PF00561 alpha/beta hydrolase fold 29 260 1.7E-28 T 01-11-2018 IPR000073 Alpha/beta hydrolase fold-1 CDA09_04015 eb8328d723e7baf8cf0e4554670af480 200 Gene3D G3DSA:3.40.50.1470 4 193 1.4E-65 T 01-11-2018 IPR036416 Peptidyl-tRNA hydrolase superfamily GO:0004045 MetaCyc: PWY-6308 CDA09_04015 eb8328d723e7baf8cf0e4554670af480 200 Hamap MF_00083 Peptidyl-tRNA hydrolase [pth]. 6 182 34.165 T 01-11-2018 IPR001328 Peptidyl-tRNA hydrolase GO:0004045 MetaCyc: PWY-6308 CDA09_04015 eb8328d723e7baf8cf0e4554670af480 200 TIGRFAM TIGR00447 pth: aminoacyl-tRNA hydrolase 7 188 7.8E-58 T 01-11-2018 IPR001328 Peptidyl-tRNA hydrolase GO:0004045 MetaCyc: PWY-6308 CDA09_04015 eb8328d723e7baf8cf0e4554670af480 200 ProSitePatterns PS01196 Peptidyl-tRNA hydrolase signature 2. 111 121 - T 01-11-2018 IPR018171 Peptidyl-tRNA hydrolase, conserved site GO:0004045 MetaCyc: PWY-6308 CDA09_04015 eb8328d723e7baf8cf0e4554670af480 200 SUPERFAMILY SSF53178 6 189 6.28E-66 T 01-11-2018 IPR036416 Peptidyl-tRNA hydrolase superfamily GO:0004045 MetaCyc: PWY-6308 CDA09_04015 eb8328d723e7baf8cf0e4554670af480 200 Pfam PF01195 Peptidyl-tRNA hydrolase 8 188 5.8E-55 T 01-11-2018 IPR001328 Peptidyl-tRNA hydrolase GO:0004045 MetaCyc: PWY-6308 CDA09_11545 df88dc3849c311c1580dca36d479cf30 234 TIGRFAM TIGR01488 HAD-SF-IB: HAD phosphoserine phosphatase-like hydrolase, family IB 16 203 1.9E-24 T 01-11-2018 CDA09_11545 df88dc3849c311c1580dca36d479cf30 234 Gene3D G3DSA:3.40.50.1000 15 227 2.2E-68 T 01-11-2018 IPR023214 HAD superfamily CDA09_11545 df88dc3849c311c1580dca36d479cf30 234 Gene3D G3DSA:1.20.1440.100 27 98 2.2E-68 T 01-11-2018 CDA09_11545 df88dc3849c311c1580dca36d479cf30 234 TIGRFAM TIGR01490 HAD-SF-IB-hyp1: HAD hydrolase, family IB 15 215 4.4E-42 T 01-11-2018 IPR006385 HAD-superfamily hydrolase, subfamily IB, SerB1-like CDA09_11545 df88dc3849c311c1580dca36d479cf30 234 Pfam PF12710 haloacid dehalogenase-like hydrolase 16 201 1.9E-34 T 01-11-2018 CDA09_11545 df88dc3849c311c1580dca36d479cf30 234 SUPERFAMILY SSF56784 14 224 1.62E-25 T 01-11-2018 IPR036412 HAD-like superfamily CDA09_14085 64e967c5e7b0fec4bab95b90f65f8bf8 273 SUPERFAMILY SSF54423 63 105 1.53E-7 T 01-11-2018 IPR009094 Disulphide bond isomerase DsbC/G, N-terminal domain superfamily GO:0042597 CDA09_14085 64e967c5e7b0fec4bab95b90f65f8bf8 273 Pfam PF10411 Disulfide bond isomerase protein N-terminus 59 107 7.6E-14 T 01-11-2018 IPR018950 Disulphide bond isomerase, DsbC/G, N-terminal CDA09_14085 64e967c5e7b0fec4bab95b90f65f8bf8 273 SUPERFAMILY SSF52833 105 264 1.61E-26 T 01-11-2018 IPR036249 Thioredoxin-like superfamily CDA09_14085 64e967c5e7b0fec4bab95b90f65f8bf8 273 Pfam PF13098 Thioredoxin-like domain 137 264 1.1E-21 T 01-11-2018 IPR012336 Thioredoxin-like fold CDA09_14085 64e967c5e7b0fec4bab95b90f65f8bf8 273 Gene3D G3DSA:3.10.450.70 49 111 5.5E-7 T 01-11-2018 IPR009094 Disulphide bond isomerase DsbC/G, N-terminal domain superfamily GO:0042597 CDA09_14085 64e967c5e7b0fec4bab95b90f65f8bf8 273 Gene3D G3DSA:3.40.30.10 128 270 3.8E-26 T 01-11-2018 CDA09_04055 74e9c7ca604f20202782aac6fbaf40bf 656 SUPERFAMILY SSF52540 37 349 3.25E-28 T 01-11-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CDA09_04055 74e9c7ca604f20202782aac6fbaf40bf 656 Pfam PF00350 Dynamin family 56 271 1.6E-15 T 01-11-2018 IPR022812 Dynamin superfamily CDA09_22535 03d2257618ab3f264769c3925da74120 83 Gene3D G3DSA:2.10.260.10 3 83 2.9E-20 T 01-11-2018 CDA09_22535 03d2257618ab3f264769c3925da74120 83 SUPERFAMILY SSF89447 6 67 8.72E-14 T 01-11-2018 IPR037914 SpoVT-AbrB domain superfamily CDA09_22535 03d2257618ab3f264769c3925da74120 83 SMART SM00966 9 54 9.6E-8 T 01-11-2018 IPR007159 SpoVT-AbrB domain GO:0003677 CDA09_22535 03d2257618ab3f264769c3925da74120 83 Pfam PF04014 Antidote-toxin recognition MazE, bacterial antitoxin 11 52 1.8E-8 T 01-11-2018 IPR007159 SpoVT-AbrB domain GO:0003677 CDA09_03440 758a3fb0d0f03b59f17bfe6ee3b27c9c 225 SUPERFAMILY SSF102712 116 191 2.88E-5 T 01-11-2018 CDA09_03440 758a3fb0d0f03b59f17bfe6ee3b27c9c 225 Pfam PF04002 RadC-like JAB domain 104 224 7.9E-41 T 01-11-2018 IPR025657 RadC-like JAB domain CDA09_03440 758a3fb0d0f03b59f17bfe6ee3b27c9c 225 Gene3D G3DSA:1.10.150.20 44 87 1.4E-5 T 01-11-2018 CDA09_03440 758a3fb0d0f03b59f17bfe6ee3b27c9c 225 SUPERFAMILY SSF47781 19 88 7.78E-11 T 01-11-2018 IPR010994 RuvA domain 2-like CDA09_03440 758a3fb0d0f03b59f17bfe6ee3b27c9c 225 TIGRFAM TIGR00608 radc: DNA repair protein RadC 11 225 1.5E-67 T 01-11-2018 IPR001405 Uncharacterised protein family UPF0758 CDA09_03440 758a3fb0d0f03b59f17bfe6ee3b27c9c 225 Gene3D G3DSA:3.40.140.10 101 225 2.9E-39 T 01-11-2018 CDA09_03440 758a3fb0d0f03b59f17bfe6ee3b27c9c 225 ProSitePatterns PS01302 Uncharacterized protein family UPF0758 signature. 173 178 - T 01-11-2018 IPR020891 Uncharacterised protein family UPF0758, conserved site CDA09_03740 924908fe6e5e0e8881dc99d401feed47 873 Gene3D G3DSA:1.10.730.10 9 803 0.0 T 01-11-2018 CDA09_03740 924908fe6e5e0e8881dc99d401feed47 873 Pfam PF13603 Leucyl-tRNA synthetase, Domain 2 221 410 1.3E-67 T 01-11-2018 IPR025709 Leucyl-tRNA synthetase, editing domain GO:0002161|GO:0006418 KEGG: 00970+6.1.1.4 CDA09_03740 924908fe6e5e0e8881dc99d401feed47 873 PRINTS PR00985 Leucyl-tRNA synthetase signature 532 554 8.6E-50 T 01-11-2018 IPR002302 Leucine-tRNA ligase GO:0000166|GO:0004823|GO:0005524|GO:0006429 KEGG: 00970+6.1.1.4|Reactome: R-HSA-379726 CDA09_03740 924908fe6e5e0e8881dc99d401feed47 873 PRINTS PR00985 Leucyl-tRNA synthetase signature 565 575 8.6E-50 T 01-11-2018 IPR002302 Leucine-tRNA ligase GO:0000166|GO:0004823|GO:0005524|GO:0006429 KEGG: 00970+6.1.1.4|Reactome: R-HSA-379726 CDA09_03740 924908fe6e5e0e8881dc99d401feed47 873 PRINTS PR00985 Leucyl-tRNA synthetase signature 494 512 8.6E-50 T 01-11-2018 IPR002302 Leucine-tRNA ligase GO:0000166|GO:0004823|GO:0005524|GO:0006429 KEGG: 00970+6.1.1.4|Reactome: R-HSA-379726 CDA09_03740 924908fe6e5e0e8881dc99d401feed47 873 PRINTS PR00985 Leucyl-tRNA synthetase signature 127 144 8.6E-50 T 01-11-2018 IPR002302 Leucine-tRNA ligase GO:0000166|GO:0004823|GO:0005524|GO:0006429 KEGG: 00970+6.1.1.4|Reactome: R-HSA-379726 CDA09_03740 924908fe6e5e0e8881dc99d401feed47 873 PRINTS PR00985 Leucyl-tRNA synthetase signature 153 169 8.6E-50 T 01-11-2018 IPR002302 Leucine-tRNA ligase GO:0000166|GO:0004823|GO:0005524|GO:0006429 KEGG: 00970+6.1.1.4|Reactome: R-HSA-379726 CDA09_03740 924908fe6e5e0e8881dc99d401feed47 873 PRINTS PR00985 Leucyl-tRNA synthetase signature 185 198 8.6E-50 T 01-11-2018 IPR002302 Leucine-tRNA ligase GO:0000166|GO:0004823|GO:0005524|GO:0006429 KEGG: 00970+6.1.1.4|Reactome: R-HSA-379726 CDA09_03740 924908fe6e5e0e8881dc99d401feed47 873 PRINTS PR00985 Leucyl-tRNA synthetase signature 215 234 8.6E-50 T 01-11-2018 IPR002302 Leucine-tRNA ligase GO:0000166|GO:0004823|GO:0005524|GO:0006429 KEGG: 00970+6.1.1.4|Reactome: R-HSA-379726 CDA09_03740 924908fe6e5e0e8881dc99d401feed47 873 TIGRFAM TIGR00396 leuS_bact: leucine--tRNA ligase 6 873 0.0 T 01-11-2018 IPR002302 Leucine-tRNA ligase GO:0000166|GO:0004823|GO:0005524|GO:0006429 KEGG: 00970+6.1.1.4|Reactome: R-HSA-379726 CDA09_03740 924908fe6e5e0e8881dc99d401feed47 873 SUPERFAMILY SSF47323 671 873 3.55E-30 T 01-11-2018 IPR009080 Aminoacyl-tRNA synthetase, class Ia, anticodon-binding GO:0000166|GO:0004812|GO:0005524|GO:0006418 CDA09_03740 924908fe6e5e0e8881dc99d401feed47 873 Pfam PF09334 tRNA synthetases class I (M) 39 171 2.6E-19 T 01-11-2018 IPR015413 Methionyl/Leucyl tRNA synthetase GO:0000166|GO:0004812|GO:0005524|GO:0006418 CDA09_03740 924908fe6e5e0e8881dc99d401feed47 873 SUPERFAMILY SSF50677 226 422 3.45E-50 T 01-11-2018 IPR009008 Valyl/Leucyl/Isoleucyl-tRNA synthetase, editing domain GO:0002161|GO:0006418 CDA09_03740 924908fe6e5e0e8881dc99d401feed47 873 SUPERFAMILY SSF52374 4 677 4.12E-156 T 01-11-2018 CDA09_03740 924908fe6e5e0e8881dc99d401feed47 873 Gene3D G3DSA:3.90.740.10 227 421 0.0 T 01-11-2018 IPR009008 Valyl/Leucyl/Isoleucyl-tRNA synthetase, editing domain GO:0002161|GO:0006418 CDA09_03740 924908fe6e5e0e8881dc99d401feed47 873 Pfam PF08264 Anticodon-binding domain of tRNA 716 834 4.7E-16 T 01-11-2018 IPR013155 Methionyl/Valyl/Leucyl/Isoleucyl-tRNA synthetase, anticodon-binding GO:0004812|GO:0006418 CDA09_03740 924908fe6e5e0e8881dc99d401feed47 873 Gene3D G3DSA:3.10.20.590 815 873 1.4E-20 T 01-11-2018 CDA09_03740 924908fe6e5e0e8881dc99d401feed47 873 Pfam PF00133 tRNA synthetases class I (I, L, M and V) 425 581 3.2E-9 T 01-11-2018 IPR002300 Aminoacyl-tRNA synthetase, class Ia GO:0000166|GO:0004812|GO:0005524|GO:0006418 CDA09_03740 924908fe6e5e0e8881dc99d401feed47 873 Pfam PF00133 tRNA synthetases class I (I, L, M and V) 627 667 7.2E-7 T 01-11-2018 IPR002300 Aminoacyl-tRNA synthetase, class Ia GO:0000166|GO:0004812|GO:0005524|GO:0006418 CDA09_03740 924908fe6e5e0e8881dc99d401feed47 873 Gene3D G3DSA:3.10.330.110 575 637 0.0 T 01-11-2018 CDA09_03740 924908fe6e5e0e8881dc99d401feed47 873 ProSitePatterns PS00178 Aminoacyl-transfer RNA synthetases class-I signature. 42 53 - T 01-11-2018 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site GO:0000166|GO:0004812|GO:0005524|GO:0006418 CDA09_03740 924908fe6e5e0e8881dc99d401feed47 873 Hamap MF_00049_B Leucine--tRNA ligase [leuS]. 4 873 23.135 T 01-11-2018 IPR002302 Leucine-tRNA ligase GO:0000166|GO:0004823|GO:0005524|GO:0006429 KEGG: 00970+6.1.1.4|Reactome: R-HSA-379726 CDA09_03740 924908fe6e5e0e8881dc99d401feed47 873 Gene3D G3DSA:3.40.50.620 33 574 0.0 T 01-11-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold CDA09_18410 ac47f505d76d4792d184ee9888f5de23 236 SUPERFAMILY SSF53335 19 180 6.63E-29 T 01-11-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase CDA09_18410 ac47f505d76d4792d184ee9888f5de23 236 Gene3D G3DSA:3.40.50.150 33 201 1.0E-25 T 01-11-2018 CDA09_18410 ac47f505d76d4792d184ee9888f5de23 236 Pfam PF08241 Methyltransferase domain 54 148 1.2E-16 T 01-11-2018 IPR013216 Methyltransferase type 11 GO:0008168 CDA09_01255 61a755037b800a32579b569775736eef 165 Gene3D G3DSA:3.30.70.20 31 85 2.2E-9 T 01-11-2018 CDA09_01255 61a755037b800a32579b569775736eef 165 Pfam PF12838 4Fe-4S dicluster domain 107 154 4.5E-7 T 01-11-2018 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain CDA09_01255 61a755037b800a32579b569775736eef 165 Pfam PF12838 4Fe-4S dicluster domain 34 81 9.1E-7 T 01-11-2018 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain CDA09_01255 61a755037b800a32579b569775736eef 165 Hamap MF_02201 Ferredoxin-type protein NapF [napF]. 23 161 22.717 T 01-11-2018 IPR004496 Ferredoxin-type protein NapF GO:0051539 CDA09_01255 61a755037b800a32579b569775736eef 165 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 35 46 - T 01-11-2018 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site CDA09_01255 61a755037b800a32579b569775736eef 165 SUPERFAMILY SSF54862 32 163 6.42E-19 T 01-11-2018 CDA09_01255 61a755037b800a32579b569775736eef 165 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 140 151 - T 01-11-2018 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site CDA09_01255 61a755037b800a32579b569775736eef 165 Gene3D G3DSA:3.30.70.20 94 164 3.1E-9 T 01-11-2018 CDA09_01255 61a755037b800a32579b569775736eef 165 TIGRFAM TIGR00402 napF: ferredoxin-type protein NapF 5 155 4.9E-36 T 01-11-2018 IPR004496 Ferredoxin-type protein NapF GO:0051539 CDA09_18495 98c0a697e0a397501949fea9a4ce505b 217 SUPERFAMILY SSF53335 1 178 2.52E-43 T 01-11-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase CDA09_18495 98c0a697e0a397501949fea9a4ce505b 217 Gene3D G3DSA:3.40.50.150 1 210 2.0E-51 T 01-11-2018 CDA09_18495 98c0a697e0a397501949fea9a4ce505b 217 Pfam PF01135 Protein-L-isoaspartate(D-aspartate) O-methyltransferase (PCMT) 16 201 3.2E-38 T 01-11-2018 CDA09_03660 6f54959974b53c8ec1279c5476a2fbea 880 Gene3D G3DSA:1.10.8.60 784 877 5.5E-8 T 01-11-2018 CDA09_03660 6f54959974b53c8ec1279c5476a2fbea 880 Pfam PF10431 C-terminal, D2-small domain, of ClpB protein 785 856 1.7E-7 T 01-11-2018 IPR019489 Clp ATPase, C-terminal CDA09_03660 6f54959974b53c8ec1279c5476a2fbea 880 SUPERFAMILY SSF52540 559 853 1.57E-64 T 01-11-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CDA09_03660 6f54959974b53c8ec1279c5476a2fbea 880 TIGRFAM TIGR03345 VI_ClpV1: type VI secretion ATPase, ClpV1 family 12 868 0.0 T 01-11-2018 IPR017729 Type VI secretion system, ATPase ClpV1 CDA09_03660 6f54959974b53c8ec1279c5476a2fbea 880 Gene3D G3DSA:3.40.50.300 375 557 1.4E-40 T 01-11-2018 CDA09_03660 6f54959974b53c8ec1279c5476a2fbea 880 SUPERFAMILY SSF81923 13 128 6.93E-19 T 01-11-2018 IPR036628 Clp, N-terminal domain superfamily GO:0019538 CDA09_03660 6f54959974b53c8ec1279c5476a2fbea 880 Gene3D G3DSA:1.10.1780.10 1 160 5.3E-47 T 01-11-2018 IPR036628 Clp, N-terminal domain superfamily GO:0019538 CDA09_03660 6f54959974b53c8ec1279c5476a2fbea 880 Gene3D G3DSA:3.40.50.300 182 372 4.0E-63 T 01-11-2018 CDA09_03660 6f54959974b53c8ec1279c5476a2fbea 880 ProSitePatterns PS00870 Chaperonins clpA/B signature 1. 324 336 - T 01-11-2018 IPR018368 ClpA/B, conserved site 1 GO:0005524 CDA09_03660 6f54959974b53c8ec1279c5476a2fbea 880 SMART SM00382 228 373 1.1E-10 T 01-11-2018 IPR003593 AAA+ ATPase domain CDA09_03660 6f54959974b53c8ec1279c5476a2fbea 880 SMART SM00382 610 758 1.8E-10 T 01-11-2018 IPR003593 AAA+ ATPase domain CDA09_03660 6f54959974b53c8ec1279c5476a2fbea 880 SUPERFAMILY SSF52540 188 509 6.23E-71 T 01-11-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CDA09_03660 6f54959974b53c8ec1279c5476a2fbea 880 Gene3D G3DSA:3.40.50.300 563 782 7.6E-70 T 01-11-2018 CDA09_03660 6f54959974b53c8ec1279c5476a2fbea 880 Pfam PF00004 ATPase family associated with various cellular activities (AAA) 233 339 2.0E-9 T 01-11-2018 IPR003959 ATPase, AAA-type, core GO:0005524 CDA09_03660 6f54959974b53c8ec1279c5476a2fbea 880 Pfam PF07724 AAA domain (Cdc48 subfamily) 609 779 5.8E-43 T 01-11-2018 IPR003959 ATPase, AAA-type, core GO:0005524 CDA09_03660 6f54959974b53c8ec1279c5476a2fbea 880 Pfam PF02861 Clp amino terminal domain, pathogenicity island component 23 75 1.6E-8 T 01-11-2018 IPR004176 Clp, N-terminal CDA09_03660 6f54959974b53c8ec1279c5476a2fbea 880 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 659 677 1.5E-34 T 01-11-2018 IPR001270 ClpA/B family GO:0005524 CDA09_03660 6f54959974b53c8ec1279c5476a2fbea 880 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 614 632 1.5E-34 T 01-11-2018 IPR001270 ClpA/B family GO:0005524 CDA09_03660 6f54959974b53c8ec1279c5476a2fbea 880 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 688 706 1.5E-34 T 01-11-2018 IPR001270 ClpA/B family GO:0005524 CDA09_03660 6f54959974b53c8ec1279c5476a2fbea 880 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 721 735 1.5E-34 T 01-11-2018 IPR001270 ClpA/B family GO:0005524 CDA09_03660 6f54959974b53c8ec1279c5476a2fbea 880 SMART SM01086 784 875 0.0027 T 01-11-2018 IPR019489 Clp ATPase, C-terminal CDA09_19210 9c68d7f9407157abdd3e7d56e5e07b90 465 ProSitePatterns PS00688 Sigma-54 interaction domain C-terminal part signature. 360 369 - T 01-11-2018 IPR025944 Sigma-54 interaction domain, conserved site CDA09_19210 9c68d7f9407157abdd3e7d56e5e07b90 465 ProSitePatterns PS00675 Sigma-54 interaction domain ATP-binding region A signature. 171 184 - T 01-11-2018 IPR025662 Sigma-54 interaction domain, ATP-binding site 1 CDA09_19210 9c68d7f9407157abdd3e7d56e5e07b90 465 SMART SM00448 13 124 4.2E-31 T 01-11-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 CDA09_19210 9c68d7f9407157abdd3e7d56e5e07b90 465 Gene3D G3DSA:1.10.10.60 420 465 2.9E-9 T 01-11-2018 CDA09_19210 9c68d7f9407157abdd3e7d56e5e07b90 465 Pfam PF02954 Bacterial regulatory protein, Fis family 426 462 1.1E-10 T 01-11-2018 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 CDA09_19210 9c68d7f9407157abdd3e7d56e5e07b90 465 SUPERFAMILY SSF52172 12 190 1.99E-39 T 01-11-2018 IPR011006 CheY-like superfamily CDA09_19210 9c68d7f9407157abdd3e7d56e5e07b90 465 SUPERFAMILY SSF52540 147 388 1.52E-68 T 01-11-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CDA09_19210 9c68d7f9407157abdd3e7d56e5e07b90 465 Gene3D G3DSA:3.40.50.300 140 317 9.1E-59 T 01-11-2018 CDA09_19210 9c68d7f9407157abdd3e7d56e5e07b90 465 SMART SM00382 167 310 1.5E-6 T 01-11-2018 IPR003593 AAA+ ATPase domain CDA09_19210 9c68d7f9407157abdd3e7d56e5e07b90 465 Gene3D G3DSA:3.40.50.2300 12 137 3.2E-32 T 01-11-2018 CDA09_19210 9c68d7f9407157abdd3e7d56e5e07b90 465 Gene3D G3DSA:1.10.8.60 318 396 1.1E-22 T 01-11-2018 CDA09_19210 9c68d7f9407157abdd3e7d56e5e07b90 465 PRINTS PR01590 FIS bacterial regulatory protein HTH signature 428 445 2.2E-8 T 01-11-2018 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 CDA09_19210 9c68d7f9407157abdd3e7d56e5e07b90 465 PRINTS PR01590 FIS bacterial regulatory protein HTH signature 445 465 2.2E-8 T 01-11-2018 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 CDA09_19210 9c68d7f9407157abdd3e7d56e5e07b90 465 Pfam PF00072 Response regulator receiver domain 15 124 2.2E-25 T 01-11-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 CDA09_19210 9c68d7f9407157abdd3e7d56e5e07b90 465 Pfam PF00158 Sigma-54 interaction domain 147 313 6.0E-67 T 01-11-2018 IPR002078 RNA polymerase sigma factor 54 interaction domain GO:0005524|GO:0006355|GO:0008134 CDA09_19210 9c68d7f9407157abdd3e7d56e5e07b90 465 SUPERFAMILY SSF46689 361 464 1.94E-8 T 01-11-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 CDA09_02375 9df353b19b365e97cd025b1a9e418e12 277 Pfam PF02219 Methylenetetrahydrofolate reductase 3 274 2.2E-89 T 01-11-2018 IPR003171 Methylenetetrahydrofolate reductase GO:0004489|GO:0006555|GO:0055114 KEGG: 00670+1.5.1.20|KEGG: 00720+1.5.1.20|MetaCyc: PWY-2201|MetaCyc: PWY-3841|Reactome: R-HSA-196757 CDA09_02375 9df353b19b365e97cd025b1a9e418e12 277 SUPERFAMILY SSF51730 3 276 1.57E-98 T 01-11-2018 IPR029041 FAD-linked oxidoreductase-like CDA09_02375 9df353b19b365e97cd025b1a9e418e12 277 Gene3D G3DSA:3.20.20.220 1 277 4.6E-99 T 01-11-2018 CDA09_02375 9df353b19b365e97cd025b1a9e418e12 277 TIGRFAM TIGR00676 fadh2: methylenetetrahydrofolate reductase [NAD(P)H] 6 274 8.4E-101 T 01-11-2018 IPR004620 5,10-methylenetetrahydrofolate reductase GO:0004489|GO:0005829|GO:0009086|GO:0055114 KEGG: 00670+1.5.1.20|KEGG: 00720+1.5.1.20|MetaCyc: PWY-2201|MetaCyc: PWY-3841 CDA09_07740 77521bce5f8ea3d1c79a8f27b6400a3c 694 PRINTS PR00344 Bacterial sensor protein C-terminal signature 640 658 1.9E-16 T 01-11-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 CDA09_07740 77521bce5f8ea3d1c79a8f27b6400a3c 694 PRINTS PR00344 Bacterial sensor protein C-terminal signature 664 677 1.9E-16 T 01-11-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 CDA09_07740 77521bce5f8ea3d1c79a8f27b6400a3c 694 PRINTS PR00344 Bacterial sensor protein C-terminal signature 609 623 1.9E-16 T 01-11-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 CDA09_07740 77521bce5f8ea3d1c79a8f27b6400a3c 694 PRINTS PR00344 Bacterial sensor protein C-terminal signature 627 637 1.9E-16 T 01-11-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 CDA09_07740 77521bce5f8ea3d1c79a8f27b6400a3c 694 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 273 398 1.1E-20 T 01-11-2018 IPR000014 PAS domain CDA09_07740 77521bce5f8ea3d1c79a8f27b6400a3c 694 SUPERFAMILY SSF55785 283 399 9.34E-22 T 01-11-2018 IPR035965 PAS domain superfamily CDA09_07740 77521bce5f8ea3d1c79a8f27b6400a3c 694 Pfam PF13426 PAS domain 283 391 4.1E-14 T 01-11-2018 IPR000014 PAS domain CDA09_07740 77521bce5f8ea3d1c79a8f27b6400a3c 694 Gene3D G3DSA:3.30.450.20 271 405 7.9E-26 T 01-11-2018 CDA09_07740 77521bce5f8ea3d1c79a8f27b6400a3c 694 Gene3D G3DSA:1.10.287.130 406 525 1.2E-22 T 01-11-2018 CDA09_07740 77521bce5f8ea3d1c79a8f27b6400a3c 694 Gene3D G3DSA:3.30.565.10 535 685 6.7E-44 T 01-11-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily CDA09_07740 77521bce5f8ea3d1c79a8f27b6400a3c 694 SMART SM00091 272 338 5.2E-9 T 01-11-2018 IPR000014 PAS domain CDA09_07740 77521bce5f8ea3d1c79a8f27b6400a3c 694 Pfam PF00512 His Kinase A (phospho-acceptor) domain 429 529 6.4E-11 T 01-11-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 CDA09_07740 77521bce5f8ea3d1c79a8f27b6400a3c 694 SMART SM00387 572 680 3.4E-32 T 01-11-2018 IPR003594 Histidine kinase/HSP90-like ATPase CDA09_07740 77521bce5f8ea3d1c79a8f27b6400a3c 694 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 573 679 2.9E-22 T 01-11-2018 IPR003594 Histidine kinase/HSP90-like ATPase CDA09_07740 77521bce5f8ea3d1c79a8f27b6400a3c 694 SMART SM00388 428 530 1.4E-6 T 01-11-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 CDA09_07740 77521bce5f8ea3d1c79a8f27b6400a3c 694 SUPERFAMILY SSF47384 423 529 5.69E-7 T 01-11-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 CDA09_07740 77521bce5f8ea3d1c79a8f27b6400a3c 694 SUPERFAMILY SSF55874 520 678 9.82E-42 T 01-11-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily CDA09_18800 72d3cab550c212540c7f1e9654539a1a 340 PRINTS PR00410 Phenol hydroxylase reductase family signature 147 154 1.1E-23 T 01-11-2018 IPR001221 Phenol hydroxylase reductase GO:0055114 CDA09_18800 72d3cab550c212540c7f1e9654539a1a 340 PRINTS PR00410 Phenol hydroxylase reductase family signature 191 200 1.1E-23 T 01-11-2018 IPR001221 Phenol hydroxylase reductase GO:0055114 CDA09_18800 72d3cab550c212540c7f1e9654539a1a 340 PRINTS PR00410 Phenol hydroxylase reductase family signature 232 241 1.1E-23 T 01-11-2018 IPR001221 Phenol hydroxylase reductase GO:0055114 CDA09_18800 72d3cab550c212540c7f1e9654539a1a 340 PRINTS PR00410 Phenol hydroxylase reductase family signature 207 226 1.1E-23 T 01-11-2018 IPR001221 Phenol hydroxylase reductase GO:0055114 CDA09_18800 72d3cab550c212540c7f1e9654539a1a 340 PRINTS PR00410 Phenol hydroxylase reductase family signature 299 307 1.1E-23 T 01-11-2018 IPR001221 Phenol hydroxylase reductase GO:0055114 CDA09_18800 72d3cab550c212540c7f1e9654539a1a 340 PRINTS PR00410 Phenol hydroxylase reductase family signature 131 143 1.1E-23 T 01-11-2018 IPR001221 Phenol hydroxylase reductase GO:0055114 CDA09_18800 72d3cab550c212540c7f1e9654539a1a 340 SUPERFAMILY SSF52343 200 334 4.32E-39 T 01-11-2018 IPR039261 Ferredoxin-NADP reductase (FNR), nucleotide-binding domain CDA09_18800 72d3cab550c212540c7f1e9654539a1a 340 ProSitePatterns PS00197 2Fe-2S ferredoxin-type iron-sulfur binding region signature. 37 45 - T 01-11-2018 IPR006058 2Fe-2S ferredoxin, iron-sulphur binding site GO:0051537 CDA09_18800 72d3cab550c212540c7f1e9654539a1a 340 Gene3D G3DSA:3.10.20.30 1 94 5.5E-24 T 01-11-2018 IPR012675 Beta-grasp domain superfamily CDA09_18800 72d3cab550c212540c7f1e9654539a1a 340 PRINTS PR00371 Flavoprotein pyridine nucleotide cytochrome reductase signature 207 226 2.8E-7 T 01-11-2018 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase GO:0016491|GO:0055114 CDA09_18800 72d3cab550c212540c7f1e9654539a1a 340 PRINTS PR00371 Flavoprotein pyridine nucleotide cytochrome reductase signature 147 154 2.8E-7 T 01-11-2018 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase GO:0016491|GO:0055114 CDA09_18800 72d3cab550c212540c7f1e9654539a1a 340 PRINTS PR00371 Flavoprotein pyridine nucleotide cytochrome reductase signature 243 254 2.8E-7 T 01-11-2018 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase GO:0016491|GO:0055114 CDA09_18800 72d3cab550c212540c7f1e9654539a1a 340 PRINTS PR00371 Flavoprotein pyridine nucleotide cytochrome reductase signature 299 307 2.8E-7 T 01-11-2018 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase GO:0016491|GO:0055114 CDA09_18800 72d3cab550c212540c7f1e9654539a1a 340 SUPERFAMILY SSF54292 1 88 8.78E-25 T 01-11-2018 IPR036010 2Fe-2S ferredoxin-like superfamily GO:0009055|GO:0051536 CDA09_18800 72d3cab550c212540c7f1e9654539a1a 340 Pfam PF00111 2Fe-2S iron-sulfur cluster binding domain 10 79 6.9E-13 T 01-11-2018 IPR001041 2Fe-2S ferredoxin-type iron-sulfur binding domain GO:0009055|GO:0051536 CDA09_18800 72d3cab550c212540c7f1e9654539a1a 340 Gene3D G3DSA:3.40.50.80 199 335 3.9E-33 T 01-11-2018 IPR039261 Ferredoxin-NADP reductase (FNR), nucleotide-binding domain CDA09_18800 72d3cab550c212540c7f1e9654539a1a 340 Pfam PF00970 Oxidoreductase FAD-binding domain 104 196 2.9E-15 T 01-11-2018 IPR008333 Flavoprotein pyridine nucleotide cytochrome reductase-like, FAD-binding domain Reactome: R-HSA-1237044 CDA09_18800 72d3cab550c212540c7f1e9654539a1a 340 Gene3D G3DSA:2.40.30.10 101 198 4.2E-26 T 01-11-2018 CDA09_18800 72d3cab550c212540c7f1e9654539a1a 340 SUPERFAMILY SSF63380 101 196 1.47E-24 T 01-11-2018 IPR017938 Riboflavin synthase-like beta-barrel CDA09_18800 72d3cab550c212540c7f1e9654539a1a 340 Pfam PF00175 Oxidoreductase NAD-binding domain 209 313 8.5E-22 T 01-11-2018 IPR001433 Oxidoreductase FAD/NAD(P)-binding GO:0016491|GO:0055114 CDA09_16665 d5bd49a6fe189746116bb7b5691cbb7a 169 PIRSF PIRSF004923 18 165 2.0E-22 T 01-11-2018 IPR026268 Protein RseC CDA09_16665 d5bd49a6fe189746116bb7b5691cbb7a 169 Pfam PF04246 Positive regulator of sigma(E), RseC/MucC 25 158 3.6E-27 T 01-11-2018 CDA09_03655 a84bfbe532928ad74e6fb90172642795 356 Pfam PF06996 Type VI secretion, TssG 19 336 1.4E-88 T 01-11-2018 IPR010732 Type VI secretion, TssG-like CDA09_03655 a84bfbe532928ad74e6fb90172642795 356 TIGRFAM TIGR03347 VI_chp_1: type VI secretion protein, VC_A0111 family 20 336 4.4E-94 T 01-11-2018 IPR010732 Type VI secretion, TssG-like CDA09_20920 c1185ff26f91e33cce95808ee4d6b503 316 SUPERFAMILY SSF52402 44 272 5.47E-53 T 01-11-2018 CDA09_20920 c1185ff26f91e33cce95808ee4d6b503 316 Pfam PF01171 PP-loop family 58 220 1.1E-14 T 01-11-2018 IPR011063 tRNA(Ile)-lysidine/2-thiocytidine synthase, N-terminal Reactome: R-HSA-6782315 CDA09_20920 c1185ff26f91e33cce95808ee4d6b503 316 Gene3D G3DSA:3.40.50.620 27 273 1.2E-45 T 01-11-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold CDA09_20920 c1185ff26f91e33cce95808ee4d6b503 316 Hamap MF_01850 tRNA-cytidine(32) 2-sulfurtransferase [ttcA]. 25 287 55.865 T 01-11-2018 IPR012089 tRNA-cytidine(32) 2-sulfurtransferase GO:0008033 CDA09_22715 886f64580009fa2df35ad196d6721ef7 530 SUPERFAMILY SSF56801 16 529 2.75E-142 T 01-11-2018 CDA09_22715 886f64580009fa2df35ad196d6721ef7 530 Gene3D G3DSA:3.40.50.980 17 251 5.3E-60 T 01-11-2018 CDA09_22715 886f64580009fa2df35ad196d6721ef7 530 Gene3D G3DSA:1.10.10.2900 252 322 1.3E-30 T 01-11-2018 CDA09_22715 886f64580009fa2df35ad196d6721ef7 530 TIGRFAM TIGR02262 benz_CoA_lig: benzoate-CoA ligase family 20 526 1.0E-254 T 01-11-2018 IPR011957 Benzoate-CoA ligase family GO:0005524|GO:0016405 CDA09_22715 886f64580009fa2df35ad196d6721ef7 530 Pfam PF00501 AMP-binding enzyme 37 431 1.3E-84 T 01-11-2018 IPR000873 AMP-dependent synthetase/ligase GO:0003824 CDA09_22715 886f64580009fa2df35ad196d6721ef7 530 Gene3D G3DSA:3.30.300.310 431 530 3.6E-30 T 01-11-2018 CDA09_22715 886f64580009fa2df35ad196d6721ef7 530 Pfam PF13193 AMP-binding enzyme C-terminal domain 439 517 1.3E-21 T 01-11-2018 IPR025110 AMP-binding enzyme, C-terminal domain CDA09_22715 886f64580009fa2df35ad196d6721ef7 530 Gene3D G3DSA:2.30.38.10 323 430 9.5E-34 T 01-11-2018 CDA09_14820 f2d2618ccd9f3a715bda93754e39628c 815 Pfam PF13654 AAA domain 27 539 2.7E-185 T 01-11-2018 CDA09_14820 f2d2618ccd9f3a715bda93754e39628c 815 Gene3D G3DSA:1.10.8.60 449 536 4.4E-10 T 01-11-2018 CDA09_14820 f2d2618ccd9f3a715bda93754e39628c 815 Gene3D G3DSA:3.30.230.10 542 785 3.8E-96 T 01-11-2018 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup CDA09_14820 f2d2618ccd9f3a715bda93754e39628c 815 SUPERFAMILY SSF52540 33 537 3.61E-8 T 01-11-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CDA09_14820 f2d2618ccd9f3a715bda93754e39628c 815 Gene3D G3DSA:3.40.50.300 220 448 8.7E-60 T 01-11-2018 CDA09_14820 f2d2618ccd9f3a715bda93754e39628c 815 Gene3D G3DSA:3.40.50.300 10 176 6.2E-27 T 01-11-2018 CDA09_14820 f2d2618ccd9f3a715bda93754e39628c 815 SUPERFAMILY SSF54211 564 756 6.07E-36 T 01-11-2018 IPR020568 Ribosomal protein S5 domain 2-type fold CDA09_14820 f2d2618ccd9f3a715bda93754e39628c 815 PRINTS PR00830 Endopeptidase La (Lon) serine protease (S16) signature 565 581 6.7E-14 T 01-11-2018 CDA09_14820 f2d2618ccd9f3a715bda93754e39628c 815 PRINTS PR00830 Endopeptidase La (Lon) serine protease (S16) signature 646 665 6.7E-14 T 01-11-2018 CDA09_14820 f2d2618ccd9f3a715bda93754e39628c 815 PRINTS PR00830 Endopeptidase La (Lon) serine protease (S16) signature 706 724 6.7E-14 T 01-11-2018 CDA09_14820 f2d2618ccd9f3a715bda93754e39628c 815 PRINTS PR00830 Endopeptidase La (Lon) serine protease (S16) signature 676 695 6.7E-14 T 01-11-2018 CDA09_14820 f2d2618ccd9f3a715bda93754e39628c 815 PRINTS PR00830 Endopeptidase La (Lon) serine protease (S16) signature 62 81 6.7E-14 T 01-11-2018 CDA09_14820 f2d2618ccd9f3a715bda93754e39628c 815 Pfam PF05362 Lon protease (S16) C-terminal proteolytic domain 647 751 6.5E-9 T 01-11-2018 IPR008269 Peptidase S16, Lon proteolytic domain GO:0004176|GO:0004252|GO:0006508 CDA09_00020 c63d374cd2dd6570fac339ecebfce641 835 SUPERFAMILY SSF56719 433 825 6.28E-87 T 01-11-2018 IPR013760 DNA topoisomerase, type IIA-like domain superfamily GO:0003918|GO:0005524 Reactome: R-HSA-4615885 CDA09_00020 c63d374cd2dd6570fac339ecebfce641 835 Gene3D G3DSA:3.40.50.670 437 605 1.1E-74 T 01-11-2018 IPR013759 DNA topoisomerase, type IIA, subunit B, C-terminal GO:0003677|GO:0003918|GO:0005524|GO:0006265 Reactome: R-HSA-4615885 CDA09_00020 c63d374cd2dd6570fac339ecebfce641 835 Pfam PF01751 Toprim domain 458 570 6.7E-19 T 01-11-2018 IPR006171 TOPRIM domain CDA09_00020 c63d374cd2dd6570fac339ecebfce641 835 Gene3D G3DSA:3.40.50.670 736 834 1.5E-24 T 01-11-2018 IPR013759 DNA topoisomerase, type IIA, subunit B, C-terminal GO:0003677|GO:0003918|GO:0005524|GO:0006265 Reactome: R-HSA-4615885 CDA09_00020 c63d374cd2dd6570fac339ecebfce641 835 PRINTS PR01159 DNA gyrase subunit B signature 509 518 5.7E-79 T 01-11-2018 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 CDA09_00020 c63d374cd2dd6570fac339ecebfce641 835 PRINTS PR01159 DNA gyrase subunit B signature 399 413 5.7E-79 T 01-11-2018 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 CDA09_00020 c63d374cd2dd6570fac339ecebfce641 835 PRINTS PR01159 DNA gyrase subunit B signature 281 299 5.7E-79 T 01-11-2018 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 CDA09_00020 c63d374cd2dd6570fac339ecebfce641 835 PRINTS PR01159 DNA gyrase subunit B signature 804 820 5.7E-79 T 01-11-2018 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 CDA09_00020 c63d374cd2dd6570fac339ecebfce641 835 PRINTS PR01159 DNA gyrase subunit B signature 20 30 5.7E-79 T 01-11-2018 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 CDA09_00020 c63d374cd2dd6570fac339ecebfce641 835 PRINTS PR01159 DNA gyrase subunit B signature 211 226 5.7E-79 T 01-11-2018 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 CDA09_00020 c63d374cd2dd6570fac339ecebfce641 835 PRINTS PR01159 DNA gyrase subunit B signature 788 800 5.7E-79 T 01-11-2018 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 CDA09_00020 c63d374cd2dd6570fac339ecebfce641 835 PRINTS PR01159 DNA gyrase subunit B signature 250 272 5.7E-79 T 01-11-2018 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 CDA09_00020 c63d374cd2dd6570fac339ecebfce641 835 PRINTS PR01159 DNA gyrase subunit B signature 226 239 5.7E-79 T 01-11-2018 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 CDA09_00020 c63d374cd2dd6570fac339ecebfce641 835 PRINTS PR01159 DNA gyrase subunit B signature 351 367 5.7E-79 T 01-11-2018 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 CDA09_00020 c63d374cd2dd6570fac339ecebfce641 835 PRINTS PR01159 DNA gyrase subunit B signature 413 433 5.7E-79 T 01-11-2018 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 CDA09_00020 c63d374cd2dd6570fac339ecebfce641 835 Hamap MF_01898 DNA gyrase subunit B [gyrB]. 17 835 97.645 T 01-11-2018 IPR011557 DNA gyrase, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 CDA09_00020 c63d374cd2dd6570fac339ecebfce641 835 Pfam PF00986 DNA gyrase B subunit, carboxyl terminus 765 824 3.5E-29 T 01-11-2018 IPR002288 DNA gyrase B subunit, C-terminal GO:0003677|GO:0003918|GO:0005524|GO:0006265 CDA09_00020 c63d374cd2dd6570fac339ecebfce641 835 ProSitePatterns PS00177 DNA topoisomerase II signature. 461 469 - T 01-11-2018 IPR018522 DNA topoisomerase, type IIA, conserved site GO:0003677|GO:0003918|GO:0005524|GO:0006265 Reactome: R-HSA-4615885 CDA09_00020 c63d374cd2dd6570fac339ecebfce641 835 TIGRFAM TIGR01059 gyrB: DNA gyrase, B subunit 20 835 1.4E-287 T 01-11-2018 IPR011557 DNA gyrase, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 CDA09_00020 c63d374cd2dd6570fac339ecebfce641 835 Gene3D G3DSA:3.30.230.10 251 431 1.0E-68 T 01-11-2018 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup CDA09_00020 c63d374cd2dd6570fac339ecebfce641 835 Pfam PF00204 DNA gyrase B 251 429 2.2E-58 T 01-11-2018 IPR013506 DNA topoisomerase, type IIA, subunit B, domain 2 GO:0003677|GO:0003918|GO:0005524|GO:0006265 Reactome: R-HSA-4615885 CDA09_00020 c63d374cd2dd6570fac339ecebfce641 835 SUPERFAMILY SSF54211 251 431 1.18E-54 T 01-11-2018 IPR020568 Ribosomal protein S5 domain 2-type fold CDA09_00020 c63d374cd2dd6570fac339ecebfce641 835 SMART SM00387 46 206 3.5E-19 T 01-11-2018 IPR003594 Histidine kinase/HSP90-like ATPase CDA09_00020 c63d374cd2dd6570fac339ecebfce641 835 Gene3D G3DSA:3.30.565.10 17 250 1.2E-87 T 01-11-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily CDA09_00020 c63d374cd2dd6570fac339ecebfce641 835 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 47 161 2.4E-18 T 01-11-2018 IPR003594 Histidine kinase/HSP90-like ATPase CDA09_00020 c63d374cd2dd6570fac339ecebfce641 835 SUPERFAMILY SSF55874 20 245 7.99E-65 T 01-11-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily CDA09_00020 c63d374cd2dd6570fac339ecebfce641 835 SMART SM00433 50 828 1.3E-253 T 01-11-2018 IPR001241 DNA topoisomerase, type IIA GO:0003677|GO:0003918|GO:0005524|GO:0006265 Reactome: R-HSA-4615885 CDA09_00020 c63d374cd2dd6570fac339ecebfce641 835 PRINTS PR00418 DNA topoisomerase II family signature 526 542 5.7E-68 T 01-11-2018 CDA09_00020 c63d374cd2dd6570fac339ecebfce641 835 PRINTS PR00418 DNA topoisomerase II family signature 50 65 5.7E-68 T 01-11-2018 CDA09_00020 c63d374cd2dd6570fac339ecebfce641 835 PRINTS PR00418 DNA topoisomerase II family signature 85 98 5.7E-68 T 01-11-2018 CDA09_00020 c63d374cd2dd6570fac339ecebfce641 835 PRINTS PR00418 DNA topoisomerase II family signature 767 783 5.7E-68 T 01-11-2018 CDA09_00020 c63d374cd2dd6570fac339ecebfce641 835 PRINTS PR00418 DNA topoisomerase II family signature 132 146 5.7E-68 T 01-11-2018 CDA09_00020 c63d374cd2dd6570fac339ecebfce641 835 PRINTS PR00418 DNA topoisomerase II family signature 459 473 5.7E-68 T 01-11-2018 CDA09_00020 c63d374cd2dd6570fac339ecebfce641 835 PRINTS PR00418 DNA topoisomerase II family signature 544 561 5.7E-68 T 01-11-2018 CDA09_00020 c63d374cd2dd6570fac339ecebfce641 835 PRINTS PR00418 DNA topoisomerase II family signature 564 576 5.7E-68 T 01-11-2018 CDA09_00020 c63d374cd2dd6570fac339ecebfce641 835 PRINTS PR00418 DNA topoisomerase II family signature 307 320 5.7E-68 T 01-11-2018 CDA09_15520 a6409b4c85df0189edd78a64a4722ba9 318 SUPERFAMILY SSF46785 48 112 2.38E-6 T 01-11-2018 IPR036390 Winged helix DNA-binding domain superfamily CDA09_15520 a6409b4c85df0189edd78a64a4722ba9 318 TIGRFAM TIGR02277 PaaX_trns_reg: phenylacetic acid degradation operon negative regulatory protein PaaX 23 304 4.1E-91 T 01-11-2018 IPR011965 Phenylacetic acid degradation operon negative regulatory protein PaaX GO:0006351 CDA09_15520 a6409b4c85df0189edd78a64a4722ba9 318 Pfam PF08223 PaaX-like protein C-terminal domain 186 282 7.4E-30 T 01-11-2018 IPR013225 PaaX-like, C-terminal CDA09_15520 a6409b4c85df0189edd78a64a4722ba9 318 Pfam PF07848 PaaX-like protein 20 88 1.7E-25 T 01-11-2018 IPR012906 PaaX-like, N-terminal CDA09_15520 a6409b4c85df0189edd78a64a4722ba9 318 Gene3D G3DSA:1.20.58.1460 215 290 2.0E-5 T 01-11-2018 CDA09_15520 a6409b4c85df0189edd78a64a4722ba9 318 Gene3D G3DSA:1.10.10.10 19 102 4.7E-30 T 01-11-2018 IPR036388 Winged helix-like DNA-binding domain superfamily CDA09_15520 a6409b4c85df0189edd78a64a4722ba9 318 PIRSF PIRSF020623 1 307 1.2E-105 T 01-11-2018 IPR011965 Phenylacetic acid degradation operon negative regulatory protein PaaX GO:0006351 CDA09_14495 f7abcec778f98066b6444a0f004fc488 486 ProSitePatterns PS00070 Aldehyde dehydrogenases cysteine active site. 283 294 - T 01-11-2018 IPR016160 Aldehyde dehydrogenase, cysteine active site GO:0016491|GO:0055114 CDA09_14495 f7abcec778f98066b6444a0f004fc488 486 Pfam PF00171 Aldehyde dehydrogenase family 20 479 6.3E-177 T 01-11-2018 IPR015590 Aldehyde dehydrogenase domain GO:0016491|GO:0055114 CDA09_14495 f7abcec778f98066b6444a0f004fc488 486 Gene3D G3DSA:3.40.309.10 262 451 8.7E-190 T 01-11-2018 IPR016163 Aldehyde dehydrogenase, C-terminal GO:0016491|GO:0016620|GO:0055114 CDA09_14495 f7abcec778f98066b6444a0f004fc488 486 ProSitePatterns PS00687 Aldehyde dehydrogenases glutamic acid active site. 255 262 - T 01-11-2018 IPR029510 Aldehyde dehydrogenase, glutamic acid active site GO:0016491|GO:0055114 CDA09_14495 f7abcec778f98066b6444a0f004fc488 486 SUPERFAMILY SSF53720 8 481 1.02E-178 T 01-11-2018 IPR016161 Aldehyde/histidinol dehydrogenase GO:0016491|GO:0055114 CDA09_14495 f7abcec778f98066b6444a0f004fc488 486 Gene3D G3DSA:3.40.605.10 21 474 8.7E-190 T 01-11-2018 IPR016162 Aldehyde dehydrogenase, N-terminal GO:0016491|GO:0055114 CDA09_14495 f7abcec778f98066b6444a0f004fc488 486 TIGRFAM TIGR01780 SSADH: succinate-semialdehyde dehydrogenase 31 477 2.9E-223 T 01-11-2018 IPR010102 Succinate semialdehyde dehydrogenase GO:0009013|GO:0009450|GO:0055114 Reactome: R-HSA-916853 CDA09_11610 6ece652cc37314262c8ebd86944be7a6 921 Pfam PF00690 Cation transporter/ATPase, N-terminus 54 119 3.0E-14 T 01-11-2018 IPR004014 Cation-transporting P-type ATPase, N-terminal Reactome: R-HSA-936837 CDA09_11610 6ece652cc37314262c8ebd86944be7a6 921 Gene3D G3DSA:1.20.1110.10 292 409 9.2E-15 T 01-11-2018 CDA09_11610 6ece652cc37314262c8ebd86944be7a6 921 Gene3D G3DSA:3.40.50.1000 570 710 3.4E-26 T 01-11-2018 IPR023214 HAD superfamily CDA09_11610 6ece652cc37314262c8ebd86944be7a6 921 Pfam PF00689 Cation transporting ATPase, C-terminus 745 906 6.7E-13 T 01-11-2018 IPR006068 Cation-transporting P-type ATPase, C-terminal Reactome: R-HSA-936837 CDA09_11610 6ece652cc37314262c8ebd86944be7a6 921 ProSitePatterns PS00154 E1-E2 ATPases phosphorylation site. 396 402 - T 01-11-2018 IPR018303 P-type ATPase, phosphorylation site Reactome: R-HSA-936837 CDA09_11610 6ece652cc37314262c8ebd86944be7a6 921 SMART SM00831 51 124 3.3E-8 T 01-11-2018 IPR004014 Cation-transporting P-type ATPase, N-terminal Reactome: R-HSA-936837 CDA09_11610 6ece652cc37314262c8ebd86944be7a6 921 Pfam PF00702 haloacid dehalogenase-like hydrolase 390 676 2.2E-19 T 01-11-2018 CDA09_11610 6ece652cc37314262c8ebd86944be7a6 921 Pfam PF00122 E1-E2 ATPase 193 373 1.0E-42 T 01-11-2018 CDA09_11610 6ece652cc37314262c8ebd86944be7a6 921 Gene3D G3DSA:2.70.150.10 126 291 1.0E-37 T 01-11-2018 CDA09_11610 6ece652cc37314262c8ebd86944be7a6 921 Gene3D G3DSA:3.40.1110.10 410 569 1.3E-59 T 01-11-2018 IPR023299 P-type ATPase, cytoplasmic domain N GO:0000166 Reactome: R-HSA-936837 CDA09_11610 6ece652cc37314262c8ebd86944be7a6 921 SUPERFAMILY SSF56784 555 706 3.02E-38 T 01-11-2018 IPR036412 HAD-like superfamily CDA09_11610 6ece652cc37314262c8ebd86944be7a6 921 SUPERFAMILY SSF81660 363 566 8.5E-40 T 01-11-2018 IPR023299 P-type ATPase, cytoplasmic domain N GO:0000166 Reactome: R-HSA-936837 CDA09_11610 6ece652cc37314262c8ebd86944be7a6 921 TIGRFAM TIGR01524 ATPase-IIIB_Mg: magnesium-translocating P-type ATPase 43 921 0.0 T 01-11-2018 IPR006415 P-type ATPase, subfamily IIIB GO:0015444|GO:0015693|GO:0016021 CDA09_11610 6ece652cc37314262c8ebd86944be7a6 921 SUPERFAMILY SSF81665 54 919 1.44E-101 T 01-11-2018 IPR023298 P-type ATPase, transmembrane domain superfamily Reactome: R-HSA-936837 CDA09_11610 6ece652cc37314262c8ebd86944be7a6 921 PRINTS PR01836 Magnesium-transporting ATPase signature 790 806 1.4E-73 T 01-11-2018 IPR006415 P-type ATPase, subfamily IIIB GO:0015444|GO:0015693|GO:0016021 CDA09_11610 6ece652cc37314262c8ebd86944be7a6 921 PRINTS PR01836 Magnesium-transporting ATPase signature 307 323 1.4E-73 T 01-11-2018 IPR006415 P-type ATPase, subfamily IIIB GO:0015444|GO:0015693|GO:0016021 CDA09_11610 6ece652cc37314262c8ebd86944be7a6 921 PRINTS PR01836 Magnesium-transporting ATPase signature 428 441 1.4E-73 T 01-11-2018 IPR006415 P-type ATPase, subfamily IIIB GO:0015444|GO:0015693|GO:0016021 CDA09_11610 6ece652cc37314262c8ebd86944be7a6 921 PRINTS PR01836 Magnesium-transporting ATPase signature 770 783 1.4E-73 T 01-11-2018 IPR006415 P-type ATPase, subfamily IIIB GO:0015444|GO:0015693|GO:0016021 CDA09_11610 6ece652cc37314262c8ebd86944be7a6 921 PRINTS PR01836 Magnesium-transporting ATPase signature 720 735 1.4E-73 T 01-11-2018 IPR006415 P-type ATPase, subfamily IIIB GO:0015444|GO:0015693|GO:0016021 CDA09_11610 6ece652cc37314262c8ebd86944be7a6 921 PRINTS PR01836 Magnesium-transporting ATPase signature 875 896 1.4E-73 T 01-11-2018 IPR006415 P-type ATPase, subfamily IIIB GO:0015444|GO:0015693|GO:0016021 CDA09_11610 6ece652cc37314262c8ebd86944be7a6 921 PRINTS PR01836 Magnesium-transporting ATPase signature 324 343 1.4E-73 T 01-11-2018 IPR006415 P-type ATPase, subfamily IIIB GO:0015444|GO:0015693|GO:0016021 CDA09_11610 6ece652cc37314262c8ebd86944be7a6 921 PRINTS PR01836 Magnesium-transporting ATPase signature 738 749 1.4E-73 T 01-11-2018 IPR006415 P-type ATPase, subfamily IIIB GO:0015444|GO:0015693|GO:0016021 CDA09_11610 6ece652cc37314262c8ebd86944be7a6 921 PRINTS PR01836 Magnesium-transporting ATPase signature 825 846 1.4E-73 T 01-11-2018 IPR006415 P-type ATPase, subfamily IIIB GO:0015444|GO:0015693|GO:0016021 CDA09_11610 6ece652cc37314262c8ebd86944be7a6 921 SUPERFAMILY SSF81653 192 293 3.92E-26 T 01-11-2018 IPR008250 P-type ATPase, A domain superfamily Reactome: R-HSA-936837 CDA09_11610 6ece652cc37314262c8ebd86944be7a6 921 TIGRFAM TIGR01494 ATPase_P-type: HAD ATPase, P-type, family IC 194 430 3.7E-29 T 01-11-2018 IPR001757 P-type ATPase GO:0016021 Reactome: R-HSA-936837 CDA09_11610 6ece652cc37314262c8ebd86944be7a6 921 TIGRFAM TIGR01494 ATPase_P-type: HAD ATPase, P-type, family IC 633 751 5.9E-30 T 01-11-2018 IPR001757 P-type ATPase GO:0016021 Reactome: R-HSA-936837 CDA09_18060 e3af92068088febc2068c550860b1c67 890 Gene3D G3DSA:2.70.150.10 19 231 1.6E-291 T 01-11-2018 CDA09_18060 e3af92068088febc2068c550860b1c67 890 Gene3D G3DSA:1.20.1110.10 58 877 1.6E-291 T 01-11-2018 CDA09_18060 e3af92068088febc2068c550860b1c67 890 SUPERFAMILY SSF81653 119 228 1.96E-29 T 01-11-2018 IPR008250 P-type ATPase, A domain superfamily Reactome: R-HSA-936837 CDA09_18060 e3af92068088febc2068c550860b1c67 890 Pfam PF00690 Cation transporter/ATPase, N-terminus 7 74 4.1E-17 T 01-11-2018 IPR004014 Cation-transporting P-type ATPase, N-terminal Reactome: R-HSA-936837 CDA09_18060 e3af92068088febc2068c550860b1c67 890 SUPERFAMILY SSF56784 326 727 2.82E-58 T 01-11-2018 IPR036412 HAD-like superfamily CDA09_18060 e3af92068088febc2068c550860b1c67 890 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 165 179 4.8E-38 T 01-11-2018 CDA09_18060 e3af92068088febc2068c550860b1c67 890 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 328 342 4.8E-38 T 01-11-2018 CDA09_18060 e3af92068088febc2068c550860b1c67 890 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 546 556 4.8E-38 T 01-11-2018 CDA09_18060 e3af92068088febc2068c550860b1c67 890 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 647 659 4.8E-38 T 01-11-2018 CDA09_18060 e3af92068088febc2068c550860b1c67 890 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 524 535 4.8E-38 T 01-11-2018 CDA09_18060 e3af92068088febc2068c550860b1c67 890 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 623 642 4.8E-38 T 01-11-2018 CDA09_18060 e3af92068088febc2068c550860b1c67 890 Gene3D G3DSA:3.40.1110.10 338 531 1.6E-291 T 01-11-2018 IPR023299 P-type ATPase, cytoplasmic domain N GO:0000166 Reactome: R-HSA-936837 CDA09_18060 e3af92068088febc2068c550860b1c67 890 TIGRFAM TIGR01494 ATPase_P-type: HAD ATPase, P-type, family IC 594 710 9.9E-34 T 01-11-2018 IPR001757 P-type ATPase GO:0016021 Reactome: R-HSA-936837 CDA09_18060 e3af92068088febc2068c550860b1c67 890 TIGRFAM TIGR01494 ATPase_P-type: HAD ATPase, P-type, family IC 226 346 3.2E-25 T 01-11-2018 IPR001757 P-type ATPase GO:0016021 Reactome: R-HSA-936837 CDA09_18060 e3af92068088febc2068c550860b1c67 890 TIGRFAM TIGR01494 ATPase_P-type: HAD ATPase, P-type, family IC 86 179 4.6E-18 T 01-11-2018 IPR001757 P-type ATPase GO:0016021 Reactome: R-HSA-936837 CDA09_18060 e3af92068088febc2068c550860b1c67 890 Pfam PF00702 haloacid dehalogenase-like hydrolase 326 637 2.4E-20 T 01-11-2018 CDA09_18060 e3af92068088febc2068c550860b1c67 890 SUPERFAMILY SSF81660 335 528 1.7E-48 T 01-11-2018 IPR023299 P-type ATPase, cytoplasmic domain N GO:0000166 Reactome: R-HSA-936837 CDA09_18060 e3af92068088febc2068c550860b1c67 890 ProSitePatterns PS00154 E1-E2 ATPases phosphorylation site. 330 336 - T 01-11-2018 IPR018303 P-type ATPase, phosphorylation site Reactome: R-HSA-936837 CDA09_18060 e3af92068088febc2068c550860b1c67 890 SUPERFAMILY SSF81665 5 882 2.48E-127 T 01-11-2018 IPR023298 P-type ATPase, transmembrane domain superfamily Reactome: R-HSA-936837 CDA09_18060 e3af92068088febc2068c550860b1c67 890 Gene3D G3DSA:3.40.50.1000 325 668 1.6E-291 T 01-11-2018 IPR023214 HAD superfamily CDA09_18060 e3af92068088febc2068c550860b1c67 890 Pfam PF00689 Cation transporting ATPase, C-terminus 707 878 1.6E-47 T 01-11-2018 IPR006068 Cation-transporting P-type ATPase, C-terminal Reactome: R-HSA-936837 CDA09_18060 e3af92068088febc2068c550860b1c67 890 SMART SM00831 6 80 3.1E-24 T 01-11-2018 IPR004014 Cation-transporting P-type ATPase, N-terminal Reactome: R-HSA-936837 CDA09_18060 e3af92068088febc2068c550860b1c67 890 PRINTS PR00120 H+-transporting ATPase (proton pump) signature 480 498 1.2E-17 T 01-11-2018 IPR001757 P-type ATPase GO:0016021 Reactome: R-HSA-936837 CDA09_18060 e3af92068088febc2068c550860b1c67 890 PRINTS PR00120 H+-transporting ATPase (proton pump) signature 595 611 1.2E-17 T 01-11-2018 IPR001757 P-type ATPase GO:0016021 Reactome: R-HSA-936837 CDA09_18060 e3af92068088febc2068c550860b1c67 890 PRINTS PR00120 H+-transporting ATPase (proton pump) signature 623 639 1.2E-17 T 01-11-2018 IPR001757 P-type ATPase GO:0016021 Reactome: R-HSA-936837 CDA09_18060 e3af92068088febc2068c550860b1c67 890 PRINTS PR00120 H+-transporting ATPase (proton pump) signature 655 680 1.2E-17 T 01-11-2018 IPR001757 P-type ATPase GO:0016021 Reactome: R-HSA-936837 CDA09_18060 e3af92068088febc2068c550860b1c67 890 Pfam PF00122 E1-E2 ATPase 115 308 7.1E-53 T 01-11-2018 CDA09_08685 eb872484a34835cd04402e181a70e400 251 Pfam PF07729 FCD domain 105 227 1.0E-18 T 01-11-2018 IPR011711 GntR, C-terminal CDA09_08685 eb872484a34835cd04402e181a70e400 251 Gene3D G3DSA:1.10.10.10 19 96 3.2E-17 T 01-11-2018 IPR036388 Winged helix-like DNA-binding domain superfamily CDA09_08685 eb872484a34835cd04402e181a70e400 251 SUPERFAMILY SSF46785 36 99 4.08E-16 T 01-11-2018 IPR036390 Winged helix DNA-binding domain superfamily CDA09_08685 eb872484a34835cd04402e181a70e400 251 Gene3D G3DSA:1.20.120.530 98 236 2.6E-21 T 01-11-2018 IPR008920 Transcription regulator FadR/GntR, C-terminal CDA09_08685 eb872484a34835cd04402e181a70e400 251 SUPERFAMILY SSF48008 100 232 1.05E-24 T 01-11-2018 IPR008920 Transcription regulator FadR/GntR, C-terminal CDA09_08685 eb872484a34835cd04402e181a70e400 251 SMART SM00895 105 228 9.2E-16 T 01-11-2018 IPR011711 GntR, C-terminal CDA09_08685 eb872484a34835cd04402e181a70e400 251 SMART SM00345 37 95 9.3E-8 T 01-11-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 CDA09_08685 eb872484a34835cd04402e181a70e400 251 Pfam PF00392 Bacterial regulatory proteins, gntR family 36 95 6.0E-14 T 01-11-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 CDA09_13515 c0e27645af21a8f82cdb17663f32db8b 464 ProSitePatterns PS00570 Bacterial ring hydroxylating dioxygenases alpha-subunit signature. 91 114 - T 01-11-2018 IPR015881 Aromatic-ring-hydroxylating dioxygenase, 2Fe-2S-binding site GO:0005506|GO:0051537|GO:0055114 CDA09_13515 c0e27645af21a8f82cdb17663f32db8b 464 Gene3D G3DSA:2.102.10.10 48 173 3.8E-129 T 01-11-2018 IPR036922 Rieske [2Fe-2S] iron-sulphur domain superfamily GO:0016491|GO:0051537|GO:0055114 CDA09_13515 c0e27645af21a8f82cdb17663f32db8b 464 Pfam PF00355 Rieske [2Fe-2S] domain 48 132 4.6E-17 T 01-11-2018 IPR017941 Rieske [2Fe-2S] iron-sulphur domain GO:0016491|GO:0051537|GO:0055114 CDA09_13515 c0e27645af21a8f82cdb17663f32db8b 464 SUPERFAMILY SSF50022 18 163 1.44E-41 T 01-11-2018 IPR036922 Rieske [2Fe-2S] iron-sulphur domain superfamily GO:0016491|GO:0051537|GO:0055114 CDA09_13515 c0e27645af21a8f82cdb17663f32db8b 464 Gene3D G3DSA:3.90.380.10 31 460 3.8E-129 T 01-11-2018 CDA09_13515 c0e27645af21a8f82cdb17663f32db8b 464 PRINTS PR00090 Ring hydroxylating dioxygenase alpha-subunit signature 33 58 1.4E-44 T 01-11-2018 IPR001663 Aromatic-ring-hydroxylating dioxygenase, alpha subunit GO:0044237|GO:0051537|GO:0055114 CDA09_13515 c0e27645af21a8f82cdb17663f32db8b 464 PRINTS PR00090 Ring hydroxylating dioxygenase alpha-subunit signature 84 104 1.4E-44 T 01-11-2018 IPR001663 Aromatic-ring-hydroxylating dioxygenase, alpha subunit GO:0044237|GO:0051537|GO:0055114 CDA09_13515 c0e27645af21a8f82cdb17663f32db8b 464 PRINTS PR00090 Ring hydroxylating dioxygenase alpha-subunit signature 105 125 1.4E-44 T 01-11-2018 IPR001663 Aromatic-ring-hydroxylating dioxygenase, alpha subunit GO:0044237|GO:0051537|GO:0055114 CDA09_13515 c0e27645af21a8f82cdb17663f32db8b 464 PRINTS PR00090 Ring hydroxylating dioxygenase alpha-subunit signature 149 175 1.4E-44 T 01-11-2018 IPR001663 Aromatic-ring-hydroxylating dioxygenase, alpha subunit GO:0044237|GO:0051537|GO:0055114 CDA09_13515 c0e27645af21a8f82cdb17663f32db8b 464 PRINTS PR00090 Ring hydroxylating dioxygenase alpha-subunit signature 190 212 1.4E-44 T 01-11-2018 IPR001663 Aromatic-ring-hydroxylating dioxygenase, alpha subunit GO:0044237|GO:0051537|GO:0055114 CDA09_13515 c0e27645af21a8f82cdb17663f32db8b 464 PRINTS PR00090 Ring hydroxylating dioxygenase alpha-subunit signature 63 78 1.4E-44 T 01-11-2018 IPR001663 Aromatic-ring-hydroxylating dioxygenase, alpha subunit GO:0044237|GO:0051537|GO:0055114 CDA09_13515 c0e27645af21a8f82cdb17663f32db8b 464 SUPERFAMILY SSF55961 166 463 8.63E-55 T 01-11-2018 CDA09_13515 c0e27645af21a8f82cdb17663f32db8b 464 Pfam PF00848 Ring hydroxylating alpha subunit (catalytic domain) 169 406 4.8E-11 T 01-11-2018 IPR015879 Aromatic-ring-hydroxylating dioxygenase, alpha subunit, C-terminal domain GO:0005506|GO:0044237|GO:0051537|GO:0055114 CDA09_12770 870fc8081d8846e7c92ab49ec0f7a03f 256 Pfam PF01026 TatD related DNase 3 250 2.8E-60 T 01-11-2018 IPR001130 TatD family GO:0016788 CDA09_12770 870fc8081d8846e7c92ab49ec0f7a03f 256 Gene3D G3DSA:3.20.20.140 1 252 1.7E-70 T 01-11-2018 CDA09_12770 870fc8081d8846e7c92ab49ec0f7a03f 256 ProSitePatterns PS01137 TatD deoxyribonuclease family signature 1. 2 10 - T 01-11-2018 IPR018228 Deoxyribonuclease, TatD-related, conserved site GO:0016888 CDA09_12770 870fc8081d8846e7c92ab49ec0f7a03f 256 ProSitePatterns PS01091 TatD deoxyribonuclease family signature 3. 187 203 - T 01-11-2018 IPR018228 Deoxyribonuclease, TatD-related, conserved site GO:0016888 CDA09_12770 870fc8081d8846e7c92ab49ec0f7a03f 256 SUPERFAMILY SSF51556 2 251 1.84E-75 T 01-11-2018 IPR032466 Metal-dependent hydrolase CDA09_12770 870fc8081d8846e7c92ab49ec0f7a03f 256 ProSitePatterns PS01090 TatD deoxyribonuclease family signature 2. 124 134 - T 01-11-2018 IPR018228 Deoxyribonuclease, TatD-related, conserved site GO:0016888 CDA09_12770 870fc8081d8846e7c92ab49ec0f7a03f 256 PIRSF PIRSF005902 1 253 1.5E-61 T 01-11-2018 IPR001130 TatD family GO:0016788 CDA09_04565 131ee349706e3fbab5093a2ca6302b14 404 Gene3D G3DSA:1.20.1250.20 197 394 6.5E-48 T 01-11-2018 CDA09_04565 131ee349706e3fbab5093a2ca6302b14 404 Gene3D G3DSA:1.20.1250.20 5 189 6.9E-36 T 01-11-2018 CDA09_04565 131ee349706e3fbab5093a2ca6302b14 404 Pfam PF07690 Major Facilitator Superfamily 24 350 4.1E-39 T 01-11-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 CDA09_04565 131ee349706e3fbab5093a2ca6302b14 404 SUPERFAMILY SSF103473 7 388 9.42E-57 T 01-11-2018 IPR036259 MFS transporter superfamily CDA09_19590 7fb1c17e29bd3e928208bd33e7e252cd 115 Hamap MF_00422 Protein translocase subunit SecE [secE]. 54 111 11.143 T 01-11-2018 IPR001901 Protein translocase complex, SecE/Sec61-gamma subunit GO:0006605|GO:0006886|GO:0016020 Reactome: R-HSA-1236974|Reactome: R-HSA-1799339|Reactome: R-HSA-381038 CDA09_19590 7fb1c17e29bd3e928208bd33e7e252cd 115 TIGRFAM TIGR00964 secE_bact: preprotein translocase, SecE subunit 56 109 3.2E-17 T 01-11-2018 IPR005807 SecE subunit of protein translocation complex, bacterial-like GO:0009306|GO:0015450|GO:0016021 CDA09_19590 7fb1c17e29bd3e928208bd33e7e252cd 115 Gene3D G3DSA:1.20.5.1030 54 111 3.1E-16 T 01-11-2018 IPR038379 SecE superfamily CDA09_19590 7fb1c17e29bd3e928208bd33e7e252cd 115 PRINTS PR01650 Bacterial translocase SecE signature 53 73 5.3E-13 T 01-11-2018 IPR005807 SecE subunit of protein translocation complex, bacterial-like GO:0009306|GO:0015450|GO:0016021 CDA09_19590 7fb1c17e29bd3e928208bd33e7e252cd 115 PRINTS PR01650 Bacterial translocase SecE signature 32 53 5.3E-13 T 01-11-2018 IPR005807 SecE subunit of protein translocation complex, bacterial-like GO:0009306|GO:0015450|GO:0016021 CDA09_19590 7fb1c17e29bd3e928208bd33e7e252cd 115 PRINTS PR01650 Bacterial translocase SecE signature 77 97 5.3E-13 T 01-11-2018 IPR005807 SecE subunit of protein translocation complex, bacterial-like GO:0009306|GO:0015450|GO:0016021 CDA09_19590 7fb1c17e29bd3e928208bd33e7e252cd 115 Pfam PF00584 SecE/Sec61-gamma subunits of protein translocation complex 58 107 4.4E-18 T 01-11-2018 IPR001901 Protein translocase complex, SecE/Sec61-gamma subunit GO:0006605|GO:0006886|GO:0016020 Reactome: R-HSA-1236974|Reactome: R-HSA-1799339|Reactome: R-HSA-381038 CDA09_02455 993a2f66a807ccd4d9f259a3b07f2c59 199 Gene3D G3DSA:1.10.8.10 134 199 5.6E-6 T 01-11-2018 CDA09_02455 993a2f66a807ccd4d9f259a3b07f2c59 199 Pfam PF14520 Helix-hairpin-helix domain 72 130 1.9E-18 T 01-11-2018 CDA09_02455 993a2f66a807ccd4d9f259a3b07f2c59 199 Pfam PF07499 RuvA, C-terminal domain 153 197 2.3E-13 T 01-11-2018 IPR011114 Holliday junction DNA helicase RuvA, C-terminal GO:0005524|GO:0006281|GO:0006310|GO:0009378|GO:0009379 CDA09_02455 993a2f66a807ccd4d9f259a3b07f2c59 199 Gene3D G3DSA:1.10.150.20 67 133 4.9E-25 T 01-11-2018 CDA09_02455 993a2f66a807ccd4d9f259a3b07f2c59 199 SMART SM00278 108 127 0.004 T 01-11-2018 IPR003583 Helix-hairpin-helix DNA-binding motif, class 1 GO:0003677|GO:0006281 CDA09_02455 993a2f66a807ccd4d9f259a3b07f2c59 199 SMART SM00278 73 92 1.3 T 01-11-2018 IPR003583 Helix-hairpin-helix DNA-binding motif, class 1 GO:0003677|GO:0006281 CDA09_02455 993a2f66a807ccd4d9f259a3b07f2c59 199 Gene3D G3DSA:2.40.50.140 1 65 6.8E-27 T 01-11-2018 CDA09_02455 993a2f66a807ccd4d9f259a3b07f2c59 199 Hamap MF_00031 Holliday junction ATP-dependent DNA helicase RuvA [ruvA]. 1 197 31.042 T 01-11-2018 IPR000085 Bacterial DNA recombination protein RuvA GO:0003678|GO:0006281|GO:0006310 CDA09_02455 993a2f66a807ccd4d9f259a3b07f2c59 199 SUPERFAMILY SSF47781 66 135 3.34E-20 T 01-11-2018 IPR010994 RuvA domain 2-like CDA09_02455 993a2f66a807ccd4d9f259a3b07f2c59 199 TIGRFAM TIGR00084 ruvA: Holliday junction DNA helicase RuvA 1 194 1.6E-52 T 01-11-2018 IPR000085 Bacterial DNA recombination protein RuvA GO:0003678|GO:0006281|GO:0006310 CDA09_02455 993a2f66a807ccd4d9f259a3b07f2c59 199 Pfam PF01330 RuvA N terminal domain 1 62 2.8E-21 T 01-11-2018 IPR013849 DNA helicase, Holliday junction RuvA type, domain I, bacterial GO:0005524|GO:0006281|GO:0006310|GO:0009378 CDA09_02455 993a2f66a807ccd4d9f259a3b07f2c59 199 SUPERFAMILY SSF46929 153 198 3.92E-9 T 01-11-2018 IPR036267 RuvA, C-terminal domain superfamily CDA09_02455 993a2f66a807ccd4d9f259a3b07f2c59 199 SUPERFAMILY SSF50249 1 63 8.0E-18 T 01-11-2018 IPR012340 Nucleic acid-binding, OB-fold CDA09_01245 a7564d3e48d34190657b0c71b6d6fc3c 649 SMART SM00304 214 266 1.5E-11 T 01-11-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 CDA09_01245 a7564d3e48d34190657b0c71b6d6fc3c 649 SUPERFAMILY SSF158472 214 261 4.71E-9 T 01-11-2018 CDA09_01245 a7564d3e48d34190657b0c71b6d6fc3c 649 Gene3D G3DSA:1.20.120.960 59 186 6.1E-6 T 01-11-2018 CDA09_01245 a7564d3e48d34190657b0c71b6d6fc3c 649 Gene3D G3DSA:3.30.565.10 504 632 8.9E-27 T 01-11-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily CDA09_01245 a7564d3e48d34190657b0c71b6d6fc3c 649 Gene3D G3DSA:3.30.450.40 287 430 1.6E-5 T 01-11-2018 IPR029016 GAF-like domain superfamily CDA09_01245 a7564d3e48d34190657b0c71b6d6fc3c 649 SUPERFAMILY SSF55781 363 426 1.35E-5 T 01-11-2018 CDA09_01245 a7564d3e48d34190657b0c71b6d6fc3c 649 Pfam PF13675 Type IV pili methyl-accepting chemotaxis transducer N-term 53 144 1.9E-9 T 01-11-2018 IPR029095 NarX-like, N-terminal CDA09_01245 a7564d3e48d34190657b0c71b6d6fc3c 649 Gene3D G3DSA:1.10.8.500 214 265 1.6E-5 T 01-11-2018 CDA09_01245 a7564d3e48d34190657b0c71b6d6fc3c 649 SMART SM00387 540 635 3.9E-13 T 01-11-2018 IPR003594 Histidine kinase/HSP90-like ATPase CDA09_01245 a7564d3e48d34190657b0c71b6d6fc3c 649 Pfam PF07730 Histidine kinase 435 500 2.1E-15 T 01-11-2018 IPR011712 Signal transduction histidine kinase, subgroup 3, dimerisation and phosphoacceptor domain GO:0000155|GO:0000160|GO:0016021|GO:0046983 CDA09_01245 a7564d3e48d34190657b0c71b6d6fc3c 649 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 541 631 9.1E-10 T 01-11-2018 IPR003594 Histidine kinase/HSP90-like ATPase CDA09_01245 a7564d3e48d34190657b0c71b6d6fc3c 649 SUPERFAMILY SSF55874 525 634 1.31E-18 T 01-11-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily CDA09_01245 a7564d3e48d34190657b0c71b6d6fc3c 649 Pfam PF00672 HAMP domain 214 261 5.5E-13 T 01-11-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 CDA09_01245 a7564d3e48d34190657b0c71b6d6fc3c 649 PIRSF PIRSF003167 17 642 1.5E-179 T 01-11-2018 IPR016380 Signal transduction histidine kinase, nitrate/nitrite-sensing GO:0000155|GO:0000160|GO:0004673|GO:0016021 CDA09_04080 cec0a4412f75724ea5e1dce6c81865c2 458 Pfam PF05193 Peptidase M16 inactive domain 192 373 8.7E-29 T 01-11-2018 IPR007863 Peptidase M16, C-terminal CDA09_04080 cec0a4412f75724ea5e1dce6c81865c2 458 ProSitePatterns PS00143 Insulinase family, zinc-binding region signature. 58 81 - T 01-11-2018 IPR001431 Peptidase M16, zinc-binding site GO:0004222|GO:0006508 CDA09_04080 cec0a4412f75724ea5e1dce6c81865c2 458 Gene3D G3DSA:3.30.830.10 23 244 5.6E-82 T 01-11-2018 CDA09_04080 cec0a4412f75724ea5e1dce6c81865c2 458 Gene3D G3DSA:3.30.830.10 246 440 1.8E-55 T 01-11-2018 CDA09_04080 cec0a4412f75724ea5e1dce6c81865c2 458 SUPERFAMILY SSF63411 27 231 4.22E-61 T 01-11-2018 IPR011249 Metalloenzyme, LuxS/M16 peptidase-like GO:0003824|GO:0046872 CDA09_04080 cec0a4412f75724ea5e1dce6c81865c2 458 SUPERFAMILY SSF63411 253 440 1.23E-36 T 01-11-2018 IPR011249 Metalloenzyme, LuxS/M16 peptidase-like GO:0003824|GO:0046872 CDA09_04080 cec0a4412f75724ea5e1dce6c81865c2 458 Pfam PF00675 Insulinase (Peptidase family M16) 38 183 1.1E-26 T 01-11-2018 IPR011765 Peptidase M16, N-terminal CDA09_21880 73cda2b0c9302b38c55b6efe7bdda7b4 332 TIGRFAM TIGR02494 PFLE_PFLC: glycyl-radical enzyme activating protein 6 281 4.0E-110 T 01-11-2018 CDA09_21880 73cda2b0c9302b38c55b6efe7bdda7b4 332 SUPERFAMILY SSF54862 4 164 1.51E-20 T 01-11-2018 CDA09_21880 73cda2b0c9302b38c55b6efe7bdda7b4 332 Pfam PF04055 Radical SAM superfamily 24 242 4.5E-29 T 01-11-2018 IPR007197 Radical SAM GO:0003824|GO:0051536 CDA09_21880 73cda2b0c9302b38c55b6efe7bdda7b4 332 PIRSF PIRSF000371 1 310 1.1E-129 T 01-11-2018 IPR012839 Organic radical enzyme activase GO:0016491|GO:0055114 CDA09_21880 73cda2b0c9302b38c55b6efe7bdda7b4 332 Gene3D G3DSA:3.30.70.20 53 117 4.8E-9 T 01-11-2018 CDA09_21880 73cda2b0c9302b38c55b6efe7bdda7b4 332 ProSitePatterns PS01087 Radical activating enzymes signature. 17 38 - T 01-11-2018 IPR001989 Radical-activating enzyme, conserved site GO:0016491|GO:0051539|GO:0055114 CDA09_21880 73cda2b0c9302b38c55b6efe7bdda7b4 332 Pfam PF13353 4Fe-4S single cluster domain 16 191 5.9E-14 T 01-11-2018 CDA09_21880 73cda2b0c9302b38c55b6efe7bdda7b4 332 TIGRFAM TIGR04003 rSAM_BssD: [benzylsuccinate synthase]-activating enzyme 4 317 8.0E-203 T 01-11-2018 IPR023880 Benzylsuccinate synthase activating enzyme GO:0018805 CDA09_21880 73cda2b0c9302b38c55b6efe7bdda7b4 332 Gene3D G3DSA:3.20.20.70 3 52 3.5E-17 T 01-11-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 CDA09_21880 73cda2b0c9302b38c55b6efe7bdda7b4 332 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 55 66 - T 01-11-2018 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site CDA09_21880 73cda2b0c9302b38c55b6efe7bdda7b4 332 Gene3D G3DSA:3.80.30.10 128 311 1.1E-49 T 01-11-2018 CDA09_04620 2dd9f3e3f18265f551e7e3a6fdb2cfcc 198 Gene3D G3DSA:3.40.1360.10 77 198 9.8E-41 T 01-11-2018 CDA09_04620 2dd9f3e3f18265f551e7e3a6fdb2cfcc 198 Pfam PF02132 RecR protein 40 78 2.7E-13 T 01-11-2018 IPR023628 Recombination protein RecR, C4-type zinc finger CDA09_04620 2dd9f3e3f18265f551e7e3a6fdb2cfcc 198 SMART SM00493 80 165 2.6E-10 T 01-11-2018 IPR006171 TOPRIM domain CDA09_04620 2dd9f3e3f18265f551e7e3a6fdb2cfcc 198 Hamap MF_00017 Recombination protein RecR [recR]. 1 198 98.209 T 01-11-2018 IPR000093 DNA recombination protein RecR GO:0003677|GO:0006281|GO:0006310 CDA09_04620 2dd9f3e3f18265f551e7e3a6fdb2cfcc 198 TIGRFAM TIGR00615 recR: recombination protein RecR 3 196 2.0E-68 T 01-11-2018 IPR000093 DNA recombination protein RecR GO:0003677|GO:0006281|GO:0006310 CDA09_04620 2dd9f3e3f18265f551e7e3a6fdb2cfcc 198 SUPERFAMILY SSF111304 3 198 6.8E-72 T 01-11-2018 IPR023627 Recombination protein RecR CDA09_04620 2dd9f3e3f18265f551e7e3a6fdb2cfcc 198 Gene3D G3DSA:1.10.8.420 1 52 1.2E-19 T 01-11-2018 CDA09_04620 2dd9f3e3f18265f551e7e3a6fdb2cfcc 198 Pfam PF13662 Toprim domain 81 170 1.5E-22 T 01-11-2018 IPR006171 TOPRIM domain CDA09_15305 8394054512648a32f6a88eef9fb9d3c9 59 SUPERFAMILY SSF57829 2 55 3.36E-16 T 01-11-2018 IPR011332 Zinc-binding ribosomal protein GO:0006412 CDA09_15305 8394054512648a32f6a88eef9fb9d3c9 59 TIGRFAM TIGR01031 rpmF_bact: ribosomal protein bL32 2 55 2.7E-18 T 01-11-2018 IPR002677 Ribosomal protein L32p GO:0003735|GO:0006412|GO:0015934 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 CDA09_15305 8394054512648a32f6a88eef9fb9d3c9 59 Pfam PF01783 Ribosomal L32p protein family 2 55 1.5E-17 T 01-11-2018 IPR002677 Ribosomal protein L32p GO:0003735|GO:0006412|GO:0015934 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 CDA09_15305 8394054512648a32f6a88eef9fb9d3c9 59 Hamap MF_00340 50S ribosomal protein L32 [rpmF]. 1 54 16.116 T 01-11-2018 IPR002677 Ribosomal protein L32p GO:0003735|GO:0006412|GO:0015934 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 CDA09_11880 46d8137fc5b094912c85cc9a2be7934c 695 Pfam PF00580 UvrD/REP helicase N-terminal domain 39 300 2.8E-49 T 01-11-2018 IPR034739 UvrD/AddA helicase, N-terminal GO:0005524 CDA09_11880 46d8137fc5b094912c85cc9a2be7934c 695 Gene3D G3DSA:1.10.10.160 134 219 2.4E-71 T 01-11-2018 IPR013986 DExx box DNA helicase domain superfamily CDA09_11880 46d8137fc5b094912c85cc9a2be7934c 695 Pfam PF13361 UvrD-like helicase C-terminal domain 566 627 3.8E-19 T 01-11-2018 IPR014017 UvrD-like DNA helicase, C-terminal GO:0005524|GO:0016787 CDA09_11880 46d8137fc5b094912c85cc9a2be7934c 695 SUPERFAMILY SSF52540 13 632 4.13E-121 T 01-11-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CDA09_11880 46d8137fc5b094912c85cc9a2be7934c 695 Gene3D G3DSA:3.40.50.300 311 631 1.4E-66 T 01-11-2018 CDA09_11880 46d8137fc5b094912c85cc9a2be7934c 695 Pfam PF13361 UvrD-like helicase C-terminal domain 308 457 1.3E-18 T 01-11-2018 IPR014017 UvrD-like DNA helicase, C-terminal GO:0005524|GO:0016787 CDA09_11880 46d8137fc5b094912c85cc9a2be7934c 695 Gene3D G3DSA:3.40.50.300 17 300 2.4E-71 T 01-11-2018 CDA09_11880 46d8137fc5b094912c85cc9a2be7934c 695 Gene3D G3DSA:1.10.486.10 412 546 1.4E-66 T 01-11-2018 CDA09_20840 c6579015dbddcda5bfbbd0f240e4ecb4 240 TIGRFAM TIGR04406 LPS_export_lptB: LPS export ABC transporter ATP-binding protein 4 240 4.1E-117 T 01-11-2018 IPR030921 LPS export ABC transporter, ATP-binding protein LptB GO:0043190|GO:0055085 CDA09_20840 c6579015dbddcda5bfbbd0f240e4ecb4 240 Pfam PF00005 ABC transporter 20 165 1.5E-33 T 01-11-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 CDA09_20840 c6579015dbddcda5bfbbd0f240e4ecb4 240 SUPERFAMILY SSF52540 3 236 8.95E-66 T 01-11-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CDA09_20840 c6579015dbddcda5bfbbd0f240e4ecb4 240 Pfam PF12399 Branched-chain amino acid ATP-binding cassette transporter 213 235 2.7E-8 T 01-11-2018 IPR032823 Branched-chain amino acid ATP-binding cassette transporter, C-terminal CDA09_20840 c6579015dbddcda5bfbbd0f240e4ecb4 240 Gene3D G3DSA:3.40.50.300 2 240 6.4E-70 T 01-11-2018 CDA09_20840 c6579015dbddcda5bfbbd0f240e4ecb4 240 SMART SM00382 28 230 2.8E-9 T 01-11-2018 IPR003593 AAA+ ATPase domain CDA09_15470 30bb481c171e0d7c8673a82deb3e9165 439 PIRSF PIRSF006444 4 438 3.1E-203 T 01-11-2018 IPR011880 Phenylacetate-CoA ligase GO:0010124|GO:0047475 KEGG: 00360+6.2.1.30|MetaCyc: PWY-1341|MetaCyc: PWY-6318|MetaCyc: PWY-7716 CDA09_15470 30bb481c171e0d7c8673a82deb3e9165 439 Pfam PF14535 AMP-binding enzyme C-terminal domain 338 436 2.0E-26 T 01-11-2018 IPR028154 AMP-dependent ligase, C-terminal CDA09_15470 30bb481c171e0d7c8673a82deb3e9165 439 SUPERFAMILY SSF56801 19 433 1.83E-67 T 01-11-2018 CDA09_15470 30bb481c171e0d7c8673a82deb3e9165 439 TIGRFAM TIGR02155 PA_CoA_ligase: phenylacetate-CoA ligase 14 436 3.1E-214 T 01-11-2018 IPR011880 Phenylacetate-CoA ligase GO:0010124|GO:0047475 KEGG: 00360+6.2.1.30|MetaCyc: PWY-1341|MetaCyc: PWY-6318|MetaCyc: PWY-7716 CDA09_15470 30bb481c171e0d7c8673a82deb3e9165 439 Pfam PF00501 AMP-binding enzyme 84 292 2.6E-17 T 01-11-2018 IPR000873 AMP-dependent synthetase/ligase GO:0003824 CDA09_15470 30bb481c171e0d7c8673a82deb3e9165 439 Gene3D G3DSA:3.30.300.30 330 437 6.8E-32 T 01-11-2018 CDA09_15470 30bb481c171e0d7c8673a82deb3e9165 439 Gene3D G3DSA:3.40.50.12780 3 329 1.5E-138 T 01-11-2018 CDA09_16915 2c060f47324e2403ee624798dd2a778e 164 ProSitePatterns PS00409 Prokaryotic N-terminal methylation site. 17 37 - T 01-11-2018 IPR012902 Prokaryotic N-terminal methylation site CDA09_16915 2c060f47324e2403ee624798dd2a778e 164 SUPERFAMILY SSF54523 19 114 5.81E-17 T 01-11-2018 CDA09_16915 2c060f47324e2403ee624798dd2a778e 164 Pfam PF07963 Prokaryotic N-terminal methylation motif 14 39 2.4E-9 T 01-11-2018 IPR012902 Prokaryotic N-terminal methylation site CDA09_16915 2c060f47324e2403ee624798dd2a778e 164 Gene3D G3DSA:3.30.700.10 19 162 6.8E-18 T 01-11-2018 CDA09_16915 2c060f47324e2403ee624798dd2a778e 164 TIGRFAM TIGR02532 IV_pilin_GFxxxE: prepilin-type N-terminal cleavage/methylation domain 17 39 2.0E-9 T 01-11-2018 IPR012902 Prokaryotic N-terminal methylation site CDA09_16915 2c060f47324e2403ee624798dd2a778e 164 Pfam PF12019 Type II transport protein GspH 57 148 4.0E-7 T 01-11-2018 IPR022346 General secretion pathway, GspH GO:0008565|GO:0015627|GO:0015628 CDA09_17935 620c679d47466c488d98ebc1806cb96b 151 Gene3D G3DSA:3.40.1550.10 1 147 3.5E-19 T 01-11-2018 IPR028976 CheC-like superfamily CDA09_17935 620c679d47466c488d98ebc1806cb96b 151 SUPERFAMILY SSF103039 1 145 5.36E-17 T 01-11-2018 IPR028976 CheC-like superfamily CDA09_17935 620c679d47466c488d98ebc1806cb96b 151 Pfam PF13690 Chemotaxis phosphatase CheX 43 134 7.4E-17 T 01-11-2018 IPR028051 Chemotaxis phosphatase CheX-like domain CDA09_16970 30c35f06f19d654df23bad155a9783f8 395 Gene3D G3DSA:3.40.47.10 129 391 5.8E-149 T 01-11-2018 IPR016039 Thiolase-like GO:0003824 CDA09_16970 30c35f06f19d654df23bad155a9783f8 395 SUPERFAMILY SSF53901 273 394 1.98E-44 T 01-11-2018 IPR016039 Thiolase-like GO:0003824 CDA09_16970 30c35f06f19d654df23bad155a9783f8 395 TIGRFAM TIGR01930 AcCoA-C-Actrans: acetyl-CoA C-acyltransferase 8 393 2.2E-135 T 01-11-2018 IPR002155 Thiolase GO:0016747 CDA09_16970 30c35f06f19d654df23bad155a9783f8 395 Pfam PF00108 Thiolase, N-terminal domain 6 263 8.6E-88 T 01-11-2018 IPR020616 Thiolase, N-terminal GO:0016747 CDA09_16970 30c35f06f19d654df23bad155a9783f8 395 ProSitePatterns PS00098 Thiolases acyl-enzyme intermediate signature. 87 105 - T 01-11-2018 IPR020615 Thiolase, acyl-enzyme intermediate active site GO:0016747 CDA09_16970 30c35f06f19d654df23bad155a9783f8 395 PIRSF PIRSF000429 1 395 2.4E-130 T 01-11-2018 IPR002155 Thiolase GO:0016747 CDA09_16970 30c35f06f19d654df23bad155a9783f8 395 Pfam PF02803 Thiolase, C-terminal domain 272 394 1.4E-43 T 01-11-2018 IPR020617 Thiolase, C-terminal GO:0016747 CDA09_16970 30c35f06f19d654df23bad155a9783f8 395 SUPERFAMILY SSF53901 5 272 9.26E-82 T 01-11-2018 IPR016039 Thiolase-like GO:0003824 CDA09_16970 30c35f06f19d654df23bad155a9783f8 395 Gene3D G3DSA:3.40.47.10 9 278 5.8E-149 T 01-11-2018 IPR016039 Thiolase-like GO:0003824 CDA09_16970 30c35f06f19d654df23bad155a9783f8 395 ProSitePatterns PS00099 Thiolases active site. 376 389 - T 01-11-2018 IPR020610 Thiolase, active site GO:0016747 CDA09_14775 c3157acd98cd9f77ef89e73812613804 467 SUPERFAMILY SSF53732 1 466 9.42E-167 T 01-11-2018 IPR036008 Aconitase, iron-sulfur domain KEGG: 00290+4.2.1.33 CDA09_14775 c3157acd98cd9f77ef89e73812613804 467 PRINTS PR00415 Aconitase family signature 133 148 1.6E-46 T 01-11-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain KEGG: 00290+4.2.1.33 CDA09_14775 c3157acd98cd9f77ef89e73812613804 467 PRINTS PR00415 Aconitase family signature 108 116 1.6E-46 T 01-11-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain KEGG: 00290+4.2.1.33 CDA09_14775 c3157acd98cd9f77ef89e73812613804 467 PRINTS PR00415 Aconitase family signature 119 132 1.6E-46 T 01-11-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain KEGG: 00290+4.2.1.33 CDA09_14775 c3157acd98cd9f77ef89e73812613804 467 PRINTS PR00415 Aconitase family signature 209 222 1.6E-46 T 01-11-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain KEGG: 00290+4.2.1.33 CDA09_14775 c3157acd98cd9f77ef89e73812613804 467 PRINTS PR00415 Aconitase family signature 195 208 1.6E-46 T 01-11-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain KEGG: 00290+4.2.1.33 CDA09_14775 c3157acd98cd9f77ef89e73812613804 467 PRINTS PR00415 Aconitase family signature 400 413 1.6E-46 T 01-11-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain KEGG: 00290+4.2.1.33 CDA09_14775 c3157acd98cd9f77ef89e73812613804 467 PRINTS PR00415 Aconitase family signature 286 300 1.6E-46 T 01-11-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain KEGG: 00290+4.2.1.33 CDA09_14775 c3157acd98cd9f77ef89e73812613804 467 PRINTS PR00415 Aconitase family signature 343 354 1.6E-46 T 01-11-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain KEGG: 00290+4.2.1.33 CDA09_14775 c3157acd98cd9f77ef89e73812613804 467 Gene3D G3DSA:3.30.499.20 4 286 1.1E-101 T 01-11-2018 CDA09_14775 c3157acd98cd9f77ef89e73812613804 467 ProSitePatterns PS00450 Aconitase family signature 1. 339 355 - T 01-11-2018 IPR018136 Aconitase family, 4Fe-4S cluster binding site KEGG: 00290+4.2.1.33 CDA09_14775 c3157acd98cd9f77ef89e73812613804 467 Gene3D G3DSA:3.30.499.10 326 467 8.1E-52 T 01-11-2018 IPR015931 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha, subdomain 1/3 KEGG: 00290+4.2.1.33 CDA09_14775 c3157acd98cd9f77ef89e73812613804 467 ProSitePatterns PS01244 Aconitase family signature 2. 400 413 - T 01-11-2018 IPR018136 Aconitase family, 4Fe-4S cluster binding site KEGG: 00290+4.2.1.33 CDA09_14775 c3157acd98cd9f77ef89e73812613804 467 TIGRFAM TIGR00170 leuC: 3-isopropylmalate dehydratase, large subunit 1 466 6.2E-235 T 01-11-2018 IPR004430 3-isopropylmalate dehydratase, large subunit GO:0003861|GO:0009098|GO:0051539 KEGG: 00290+4.2.1.33 CDA09_14775 c3157acd98cd9f77ef89e73812613804 467 Pfam PF00330 Aconitase family (aconitate hydratase) 7 458 4.8E-158 T 01-11-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain KEGG: 00290+4.2.1.33 CDA09_14775 c3157acd98cd9f77ef89e73812613804 467 Hamap MF_01026 3-isopropylmalate dehydratase large subunit [leuC]. 1 467 59.785 T 01-11-2018 IPR004430 3-isopropylmalate dehydratase, large subunit GO:0003861|GO:0009098|GO:0051539 KEGG: 00290+4.2.1.33 CDA09_07025 1da6857233bb88de146dd6a39095a218 108 Gene3D G3DSA:3.30.300.130 6 104 2.9E-31 T 01-11-2018 IPR034904 Fe-S cluster assembly domain superfamily CDA09_07025 1da6857233bb88de146dd6a39095a218 108 Pfam PF01883 Iron-sulfur cluster assembly protein 9 74 1.6E-19 T 01-11-2018 IPR002744 MIP18 family-like CDA09_07025 1da6857233bb88de146dd6a39095a218 108 SUPERFAMILY SSF117916 4 101 1.93E-28 T 01-11-2018 IPR034904 Fe-S cluster assembly domain superfamily CDA09_02550 3b6c3ce7bd69999f4a7c1f0913641b53 386 SUPERFAMILY SSF53756 23 373 2.36E-63 T 01-11-2018 CDA09_02550 3b6c3ce7bd69999f4a7c1f0913641b53 386 Pfam PF00534 Glycosyl transferases group 1 206 354 1.4E-33 T 01-11-2018 IPR001296 Glycosyl transferase, family 1 CDA09_02550 3b6c3ce7bd69999f4a7c1f0913641b53 386 Gene3D G3DSA:3.40.50.2000 183 347 1.8E-51 T 01-11-2018 CDA09_02550 3b6c3ce7bd69999f4a7c1f0913641b53 386 Pfam PF13439 Glycosyltransferase Family 4 28 183 5.0E-10 T 01-11-2018 IPR028098 Glycosyltransferase subfamily 4-like, N-terminal domain Reactome: R-HSA-446193|Reactome: R-HSA-4549349 CDA09_02550 3b6c3ce7bd69999f4a7c1f0913641b53 386 Gene3D G3DSA:3.40.50.2000 28 182 1.8E-51 T 01-11-2018 CDA09_17845 dc56026cfd739c1c81e4abbe439c6b4c 286 Pfam PF16916 Dimerisation domain of Zinc Transporter 210 284 1.4E-14 T 01-11-2018 IPR027470 Cation efflux protein, cytoplasmic domain CDA09_17845 dc56026cfd739c1c81e4abbe439c6b4c 286 Pfam PF01545 Cation efflux family 10 204 4.9E-38 T 01-11-2018 IPR002524 Cation efflux protein GO:0006812|GO:0008324|GO:0016021|GO:0055085 CDA09_17845 dc56026cfd739c1c81e4abbe439c6b4c 286 SUPERFAMILY SSF161111 7 205 1.44E-50 T 01-11-2018 IPR027469 Cation efflux transmembrane domain superfamily CDA09_17845 dc56026cfd739c1c81e4abbe439c6b4c 286 Gene3D G3DSA:3.30.70.1350 204 286 1.1E-18 T 01-11-2018 IPR036837 Cation efflux protein, cytoplasmic domain superfamily Reactome: R-HSA-435368 CDA09_17845 dc56026cfd739c1c81e4abbe439c6b4c 286 Gene3D G3DSA:1.20.1510.10 6 203 3.5E-55 T 01-11-2018 IPR027469 Cation efflux transmembrane domain superfamily CDA09_17845 dc56026cfd739c1c81e4abbe439c6b4c 286 TIGRFAM TIGR01297 CDF: cation diffusion facilitator family transporter 8 285 7.2E-64 T 01-11-2018 IPR002524 Cation efflux protein GO:0006812|GO:0008324|GO:0016021|GO:0055085 CDA09_17845 dc56026cfd739c1c81e4abbe439c6b4c 286 SUPERFAMILY SSF160240 207 285 1.28E-13 T 01-11-2018 IPR036837 Cation efflux protein, cytoplasmic domain superfamily Reactome: R-HSA-435368 CDA09_02515 9f97c1acc2762332e75398639b2fc021 921 Pfam PF01367 5'-3' exonuclease, C-terminal SAM fold 166 257 4.6E-27 T 01-11-2018 IPR020045 DNA polymerase I-like, H3TH domain GO:0003677|GO:0003824 CDA09_02515 9f97c1acc2762332e75398639b2fc021 921 SMART SM00279 168 203 2.4E-12 T 01-11-2018 IPR008918 Helix-hairpin-helix motif, class 2 GO:0003677|GO:0003824 CDA09_02515 9f97c1acc2762332e75398639b2fc021 921 Pfam PF02739 5'-3' exonuclease, N-terminal resolvase-like domain 4 165 5.1E-50 T 01-11-2018 IPR020046 5'-3' exonuclease, alpha-helical arch, N-terminal GO:0003677 CDA09_02515 9f97c1acc2762332e75398639b2fc021 921 Gene3D G3DSA:1.10.150.20 169 241 1.4E-91 T 01-11-2018 CDA09_02515 9f97c1acc2762332e75398639b2fc021 921 Gene3D G3DSA:3.30.420.10 322 535 1.9E-68 T 01-11-2018 IPR036397 Ribonuclease H superfamily GO:0003676 CDA09_02515 9f97c1acc2762332e75398639b2fc021 921 SUPERFAMILY SSF47807 166 280 9.57E-32 T 01-11-2018 IPR036279 5'-3' exonuclease, C-terminal domain superfamily CDA09_02515 9f97c1acc2762332e75398639b2fc021 921 PRINTS PR00868 DNA-polymerase family A (pol I) signature 806 817 6.3E-77 T 01-11-2018 IPR002298 DNA polymerase A GO:0003887|GO:0006261 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 CDA09_02515 9f97c1acc2762332e75398639b2fc021 921 PRINTS PR00868 DNA-polymerase family A (pol I) signature 671 686 6.3E-77 T 01-11-2018 IPR002298 DNA polymerase A GO:0003887|GO:0006261 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 CDA09_02515 9f97c1acc2762332e75398639b2fc021 921 PRINTS PR00868 DNA-polymerase family A (pol I) signature 723 736 6.3E-77 T 01-11-2018 IPR002298 DNA polymerase A GO:0003887|GO:0006261 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 CDA09_02515 9f97c1acc2762332e75398639b2fc021 921 PRINTS PR00868 DNA-polymerase family A (pol I) signature 838 854 6.3E-77 T 01-11-2018 IPR002298 DNA polymerase A GO:0003887|GO:0006261 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 CDA09_02515 9f97c1acc2762332e75398639b2fc021 921 PRINTS PR00868 DNA-polymerase family A (pol I) signature 784 795 6.3E-77 T 01-11-2018 IPR002298 DNA polymerase A GO:0003887|GO:0006261 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 CDA09_02515 9f97c1acc2762332e75398639b2fc021 921 PRINTS PR00868 DNA-polymerase family A (pol I) signature 648 670 6.3E-77 T 01-11-2018 IPR002298 DNA polymerase A GO:0003887|GO:0006261 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 CDA09_02515 9f97c1acc2762332e75398639b2fc021 921 PRINTS PR00868 DNA-polymerase family A (pol I) signature 693 716 6.3E-77 T 01-11-2018 IPR002298 DNA polymerase A GO:0003887|GO:0006261 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 CDA09_02515 9f97c1acc2762332e75398639b2fc021 921 PRINTS PR00868 DNA-polymerase family A (pol I) signature 747 772 6.3E-77 T 01-11-2018 IPR002298 DNA polymerase A GO:0003887|GO:0006261 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 CDA09_02515 9f97c1acc2762332e75398639b2fc021 921 PRINTS PR00868 DNA-polymerase family A (pol I) signature 868 881 6.3E-77 T 01-11-2018 IPR002298 DNA polymerase A GO:0003887|GO:0006261 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 CDA09_02515 9f97c1acc2762332e75398639b2fc021 921 SUPERFAMILY SSF56672 517 921 1.22E-154 T 01-11-2018 CDA09_02515 9f97c1acc2762332e75398639b2fc021 921 TIGRFAM TIGR00593 pola: DNA polymerase I 4 921 3.9E-279 T 01-11-2018 IPR018320 DNA polymerase 1 GO:0003887|GO:0006260 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 CDA09_02515 9f97c1acc2762332e75398639b2fc021 921 SUPERFAMILY SSF53098 327 510 4.8E-55 T 01-11-2018 IPR012337 Ribonuclease H-like superfamily CDA09_02515 9f97c1acc2762332e75398639b2fc021 921 SUPERFAMILY SSF88723 2 165 3.36E-54 T 01-11-2018 IPR029060 PIN-like domain superfamily CDA09_02515 9f97c1acc2762332e75398639b2fc021 921 SMART SM00475 1 256 2.6E-119 T 01-11-2018 IPR002421 5'-3' exonuclease, N-terminal GO:0003677 CDA09_02515 9f97c1acc2762332e75398639b2fc021 921 SMART SM00474 324 510 1.7E-33 T 01-11-2018 IPR002562 3'-5' exonuclease domain GO:0003676|GO:0006139|GO:0008408 CDA09_02515 9f97c1acc2762332e75398639b2fc021 921 Gene3D G3DSA:1.10.150.20 702 845 1.2E-106 T 01-11-2018 CDA09_02515 9f97c1acc2762332e75398639b2fc021 921 Pfam PF01612 3'-5' exonuclease 324 510 8.5E-38 T 01-11-2018 IPR002562 3'-5' exonuclease domain GO:0003676|GO:0006139|GO:0008408 CDA09_02515 9f97c1acc2762332e75398639b2fc021 921 Gene3D G3DSA:3.40.50.1010 4 272 1.4E-91 T 01-11-2018 CDA09_02515 9f97c1acc2762332e75398639b2fc021 921 ProSitePatterns PS00447 DNA polymerase family A signature. 747 766 - T 01-11-2018 IPR019760 DNA-directed DNA polymerase, family A, conserved site GO:0003887|GO:0006260 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 CDA09_02515 9f97c1acc2762332e75398639b2fc021 921 Gene3D G3DSA:1.20.1060.10 536 651 9.3E-42 T 01-11-2018 CDA09_02515 9f97c1acc2762332e75398639b2fc021 921 SMART SM00482 679 885 2.2E-114 T 01-11-2018 IPR001098 DNA-directed DNA polymerase, family A, palm domain GO:0003677|GO:0003887|GO:0006260 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 CDA09_02515 9f97c1acc2762332e75398639b2fc021 921 Gene3D G3DSA:3.30.70.370 657 917 1.2E-106 T 01-11-2018 CDA09_02515 9f97c1acc2762332e75398639b2fc021 921 Pfam PF00476 DNA polymerase family A 545 919 4.5E-151 T 01-11-2018 IPR001098 DNA-directed DNA polymerase, family A, palm domain GO:0003677|GO:0003887|GO:0006260 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 CDA09_01385 e72994f63e56bbbc185e391198a4841e 257 Pfam PF01578 Cytochrome C assembly protein 42 193 9.7E-17 T 01-11-2018 IPR002541 Cytochrome c assembly protein GO:0017004|GO:0020037 CDA09_01385 e72994f63e56bbbc185e391198a4841e 257 PRINTS PR01386 Cytochrome c-type biogenesis protein CcmC signature 169 195 4.6E-35 T 01-11-2018 IPR003557 Cytochrome c-type biogenesis protein CcmC GO:0015232|GO:0015886|GO:0016020|GO:0017004 CDA09_01385 e72994f63e56bbbc185e391198a4841e 257 PRINTS PR01386 Cytochrome c-type biogenesis protein CcmC signature 134 154 4.6E-35 T 01-11-2018 IPR003557 Cytochrome c-type biogenesis protein CcmC GO:0015232|GO:0015886|GO:0016020|GO:0017004 CDA09_01385 e72994f63e56bbbc185e391198a4841e 257 PRINTS PR01386 Cytochrome c-type biogenesis protein CcmC signature 113 133 4.6E-35 T 01-11-2018 IPR003557 Cytochrome c-type biogenesis protein CcmC GO:0015232|GO:0015886|GO:0016020|GO:0017004 CDA09_01385 e72994f63e56bbbc185e391198a4841e 257 PRINTS PR01386 Cytochrome c-type biogenesis protein CcmC signature 215 239 4.6E-35 T 01-11-2018 IPR003557 Cytochrome c-type biogenesis protein CcmC GO:0015232|GO:0015886|GO:0016020|GO:0017004 CDA09_01385 e72994f63e56bbbc185e391198a4841e 257 PRINTS PR01386 Cytochrome c-type biogenesis protein CcmC signature 58 75 4.6E-35 T 01-11-2018 IPR003557 Cytochrome c-type biogenesis protein CcmC GO:0015232|GO:0015886|GO:0016020|GO:0017004 CDA09_01385 e72994f63e56bbbc185e391198a4841e 257 PRINTS PR01386 Cytochrome c-type biogenesis protein CcmC signature 75 95 4.6E-35 T 01-11-2018 IPR003557 Cytochrome c-type biogenesis protein CcmC GO:0015232|GO:0015886|GO:0016020|GO:0017004 CDA09_04000 fe2882f9bec6cff2fb4b410347e96161 141 Pfam PF04138 GtrA-like protein 16 130 4.0E-24 T 01-11-2018 IPR007267 GtrA-like protein GO:0000271|GO:0016021 CDA09_02865 b8e37f6dc16aee85965433b06b839ff5 319 Gene3D G3DSA:3.40.50.1820 1 312 4.5E-95 T 01-11-2018 IPR029058 Alpha/Beta hydrolase fold CDA09_02865 b8e37f6dc16aee85965433b06b839ff5 319 Pfam PF07859 alpha/beta hydrolase fold 83 288 3.8E-72 T 01-11-2018 IPR013094 Alpha/beta hydrolase fold-3 GO:0016787 CDA09_02865 b8e37f6dc16aee85965433b06b839ff5 319 ProSitePatterns PS01173 Lipolytic enzymes "G-D-X-G" family, putative histidine active site. 83 99 - T 01-11-2018 IPR002168 Lipase, GDXG, putative histidine active site GO:0016787 Reactome: R-HSA-163560 CDA09_02865 b8e37f6dc16aee85965433b06b839ff5 319 SUPERFAMILY SSF53474 39 312 2.91E-72 T 01-11-2018 IPR029058 Alpha/Beta hydrolase fold CDA09_07345 add93021602b56eb2d7ad699b12f7b5e 152 Pfam PF02639 Uncharacterized BCR, YaiI/YqxD family COG1671 17 145 7.5E-49 T 01-11-2018 IPR003791 Protein of unknown function UPF0178 CDA09_07345 add93021602b56eb2d7ad699b12f7b5e 152 Hamap MF_00489 UPF0178 protein YaiI [yaiI]. 1 147 31.879 T 01-11-2018 IPR003791 Protein of unknown function UPF0178 CDA09_22805 2dd156a33ea914eb7316b44b8f1270f8 576 TIGRFAM TIGR01417 PTS_I_fam: phosphoenolpyruvate-protein phosphotransferase 5 569 2.9E-159 T 01-11-2018 IPR006318 Phosphotransferase system, enzyme I-like GO:0016772 CDA09_22805 2dd156a33ea914eb7316b44b8f1270f8 576 SUPERFAMILY SSF51621 256 552 3.4E-100 T 01-11-2018 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain superfamily GO:0003824 CDA09_22805 2dd156a33ea914eb7316b44b8f1270f8 576 SUPERFAMILY SSF47831 28 147 5.1E-28 T 01-11-2018 IPR036618 PtsI, HPr-binding domain superfamily GO:0009401 CDA09_22805 2dd156a33ea914eb7316b44b8f1270f8 576 PRINTS PR01736 Phosphoenolpyruvate-protein phosphotransferase signature 453 468 2.7E-26 T 01-11-2018 CDA09_22805 2dd156a33ea914eb7316b44b8f1270f8 576 PRINTS PR01736 Phosphoenolpyruvate-protein phosphotransferase signature 470 485 2.7E-26 T 01-11-2018 CDA09_22805 2dd156a33ea914eb7316b44b8f1270f8 576 PRINTS PR01736 Phosphoenolpyruvate-protein phosphotransferase signature 299 318 2.7E-26 T 01-11-2018 CDA09_22805 2dd156a33ea914eb7316b44b8f1270f8 576 PRINTS PR01736 Phosphoenolpyruvate-protein phosphotransferase signature 506 518 2.7E-26 T 01-11-2018 CDA09_22805 2dd156a33ea914eb7316b44b8f1270f8 576 ProSitePatterns PS00370 PEP-utilizing enzymes phosphorylation site signature. 190 201 - T 01-11-2018 IPR018274 PEP-utilising enzyme, active site GO:0016310|GO:0016772 CDA09_22805 2dd156a33ea914eb7316b44b8f1270f8 576 Pfam PF00391 PEP-utilising enzyme, mobile domain 161 231 1.7E-23 T 01-11-2018 IPR008279 PEP-utilising enzyme, mobile domain GO:0016310|GO:0016772 CDA09_22805 2dd156a33ea914eb7316b44b8f1270f8 576 PIRSF PIRSF000732 1 576 7.1E-205 T 01-11-2018 IPR024692 Phosphotransferase system, enzyme I GO:0008965|GO:0009401 CDA09_22805 2dd156a33ea914eb7316b44b8f1270f8 576 ProSitePatterns PS00742 PEP-utilizing enzymes signature 2. 453 471 - T 01-11-2018 IPR023151 PEP-utilising enzyme, conserved site GO:0016772 CDA09_22805 2dd156a33ea914eb7316b44b8f1270f8 576 Gene3D G3DSA:1.10.274.10 24 150 2.9E-70 T 01-11-2018 IPR036618 PtsI, HPr-binding domain superfamily GO:0009401 CDA09_22805 2dd156a33ea914eb7316b44b8f1270f8 576 Pfam PF02896 PEP-utilising enzyme, TIM barrel domain 258 546 6.9E-104 T 01-11-2018 IPR000121 PEP-utilising enzyme, C-terminal GO:0016310|GO:0016772 CDA09_22805 2dd156a33ea914eb7316b44b8f1270f8 576 SUPERFAMILY SSF52009 129 250 3.4E-31 T 01-11-2018 IPR036637 Phosphohistidine domain superfamily GO:0016310|GO:0016772 CDA09_22805 2dd156a33ea914eb7316b44b8f1270f8 576 Pfam PF05524 PEP-utilising enzyme, N-terminal 6 130 1.6E-28 T 01-11-2018 IPR008731 Phosphotransferase system, enzyme I N-terminal GO:0009401 CDA09_22805 2dd156a33ea914eb7316b44b8f1270f8 576 Gene3D G3DSA:3.20.20.60 240 575 2.9E-112 T 01-11-2018 CDA09_22805 2dd156a33ea914eb7316b44b8f1270f8 576 Gene3D G3DSA:3.50.30.10 7 239 2.9E-70 T 01-11-2018 CDA09_02530 2cac79edc342413c77cef88c4df12080 357 SUPERFAMILY SSF53756 10 353 1.21E-63 T 01-11-2018 CDA09_02530 2cac79edc342413c77cef88c4df12080 357 Pfam PF00534 Glycosyl transferases group 1 166 330 1.1E-30 T 01-11-2018 IPR001296 Glycosyl transferase, family 1 CDA09_02530 2cac79edc342413c77cef88c4df12080 357 Gene3D G3DSA:3.40.50.2000 152 338 8.3E-52 T 01-11-2018 CDA09_02530 2cac79edc342413c77cef88c4df12080 357 Gene3D G3DSA:3.40.50.2000 76 348 8.3E-52 T 01-11-2018 CDA09_16115 86cf0a5e39133fc4482cdf2ce65fc859 269 PRINTS PR00412 Epoxide hydrolase signature 243 265 4.8E-7 T 01-11-2018 IPR000639 Epoxide hydrolase-like GO:0003824 CDA09_16115 86cf0a5e39133fc4482cdf2ce65fc859 269 PRINTS PR00412 Epoxide hydrolase signature 50 65 4.8E-7 T 01-11-2018 IPR000639 Epoxide hydrolase-like GO:0003824 CDA09_16115 86cf0a5e39133fc4482cdf2ce65fc859 269 PRINTS PR00412 Epoxide hydrolase signature 93 106 4.8E-7 T 01-11-2018 IPR000639 Epoxide hydrolase-like GO:0003824 CDA09_16115 86cf0a5e39133fc4482cdf2ce65fc859 269 Gene3D G3DSA:3.40.50.1820 3 269 1.9E-53 T 01-11-2018 IPR029058 Alpha/Beta hydrolase fold CDA09_16115 86cf0a5e39133fc4482cdf2ce65fc859 269 PRINTS PR00111 Alpha/beta hydrolase fold signature 107 120 7.6E-11 T 01-11-2018 IPR000073 Alpha/beta hydrolase fold-1 CDA09_16115 86cf0a5e39133fc4482cdf2ce65fc859 269 PRINTS PR00111 Alpha/beta hydrolase fold signature 50 65 7.6E-11 T 01-11-2018 IPR000073 Alpha/beta hydrolase fold-1 CDA09_16115 86cf0a5e39133fc4482cdf2ce65fc859 269 PRINTS PR00111 Alpha/beta hydrolase fold signature 208 222 7.6E-11 T 01-11-2018 IPR000073 Alpha/beta hydrolase fold-1 CDA09_16115 86cf0a5e39133fc4482cdf2ce65fc859 269 PRINTS PR00111 Alpha/beta hydrolase fold signature 93 106 7.6E-11 T 01-11-2018 IPR000073 Alpha/beta hydrolase fold-1 CDA09_16115 86cf0a5e39133fc4482cdf2ce65fc859 269 SUPERFAMILY SSF53474 4 266 4.81E-52 T 01-11-2018 IPR029058 Alpha/Beta hydrolase fold CDA09_16115 86cf0a5e39133fc4482cdf2ce65fc859 269 Pfam PF12697 Alpha/beta hydrolase family 26 259 6.2E-27 T 01-11-2018 IPR000073 Alpha/beta hydrolase fold-1 CDA09_20875 baf7a37cc92eaed6205924a0be40d1ae 643 Gene3D G3DSA:1.25.20.10 27 382 3.4E-74 T 01-11-2018 CDA09_20875 baf7a37cc92eaed6205924a0be40d1ae 643 Gene3D G3DSA:1.10.530.10 469 632 3.2E-43 T 01-11-2018 CDA09_20875 baf7a37cc92eaed6205924a0be40d1ae 643 Pfam PF01464 Transglycosylase SLT domain 484 586 2.3E-20 T 01-11-2018 IPR008258 Transglycosylase SLT domain 1 CDA09_20875 baf7a37cc92eaed6205924a0be40d1ae 643 SUPERFAMILY SSF48435 23 471 4.32E-105 T 01-11-2018 IPR008939 Lytic transglycosylase, superhelical U-shaped GO:0004553|GO:0042597 CDA09_20875 baf7a37cc92eaed6205924a0be40d1ae 643 SUPERFAMILY SSF53955 474 632 2.7E-44 T 01-11-2018 IPR023346 Lysozyme-like domain superfamily CDA09_20875 baf7a37cc92eaed6205924a0be40d1ae 643 ProSitePatterns PS00922 Prokaryotic transglycosylases signature. 496 524 - T 01-11-2018 IPR000189 Prokaryotic transglycosylase, active site GO:0000270|GO:0008933|GO:0016020 CDA09_20875 baf7a37cc92eaed6205924a0be40d1ae 643 Pfam PF14718 Soluble lytic murein transglycosylase L domain 402 458 3.6E-8 T 01-11-2018 IPR012289 Lytic transglycosylase, superhelical linker GO:0004553|GO:0042597 CDA09_15995 3d79f96ea28fe6d3062b403a8755a7cc 322 Gene3D G3DSA:3.40.50.720 7 317 4.1E-112 T 01-11-2018 CDA09_15995 3d79f96ea28fe6d3062b403a8755a7cc 322 ProSitePatterns PS00671 D-isomer specific 2-hydroxyacid dehydrogenases signature 3. 230 246 - T 01-11-2018 IPR029753 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain conserved site CDA09_15995 3d79f96ea28fe6d3062b403a8755a7cc 322 ProSitePatterns PS00670 D-isomer specific 2-hydroxyacid dehydrogenases signature 2. 201 223 - T 01-11-2018 IPR029753 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain conserved site CDA09_15995 3d79f96ea28fe6d3062b403a8755a7cc 322 SUPERFAMILY SSF52283 3 136 1.38E-34 T 01-11-2018 CDA09_15995 3d79f96ea28fe6d3062b403a8755a7cc 322 SUPERFAMILY SSF51735 102 291 6.78E-62 T 01-11-2018 IPR036291 NAD(P)-binding domain superfamily CDA09_15995 3d79f96ea28fe6d3062b403a8755a7cc 322 Pfam PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain 15 321 1.1E-27 T 01-11-2018 IPR006139 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain GO:0016616|GO:0051287|GO:0055114 CDA09_15995 3d79f96ea28fe6d3062b403a8755a7cc 322 Pfam PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain 110 290 5.0E-61 T 01-11-2018 IPR006140 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain GO:0051287|GO:0055114 CDA09_15995 3d79f96ea28fe6d3062b403a8755a7cc 322 Gene3D G3DSA:3.40.50.720 99 290 4.1E-112 T 01-11-2018 CDA09_19770 569fc1c1881a1e1b0e8f23fc306fcc2d 673 SUPERFAMILY SSF103190 91 196 3.77E-5 T 01-11-2018 IPR029151 Periplasmic sensor-like domain superfamily CDA09_19770 569fc1c1881a1e1b0e8f23fc306fcc2d 673 Gene3D G3DSA:3.30.450.20 36 188 6.7E-33 T 01-11-2018 CDA09_19770 569fc1c1881a1e1b0e8f23fc306fcc2d 673 SUPERFAMILY SSF55785 319 445 7.89E-22 T 01-11-2018 IPR035965 PAS domain superfamily CDA09_19770 569fc1c1881a1e1b0e8f23fc306fcc2d 673 SUPERFAMILY SSF55874 549 670 7.47E-21 T 01-11-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily CDA09_19770 569fc1c1881a1e1b0e8f23fc306fcc2d 673 Gene3D G3DSA:3.30.450.20 191 281 5.3E-14 T 01-11-2018 CDA09_19770 569fc1c1881a1e1b0e8f23fc306fcc2d 673 Pfam PF02743 Cache domain 95 274 5.1E-21 T 01-11-2018 IPR033479 Double Cache domain 1 CDA09_19770 569fc1c1881a1e1b0e8f23fc306fcc2d 673 Pfam PF13426 PAS domain 342 446 2.8E-10 T 01-11-2018 IPR000014 PAS domain CDA09_19770 569fc1c1881a1e1b0e8f23fc306fcc2d 673 Pfam PF07730 Histidine kinase 475 540 5.1E-16 T 01-11-2018 IPR011712 Signal transduction histidine kinase, subgroup 3, dimerisation and phosphoacceptor domain GO:0000155|GO:0000160|GO:0016021|GO:0046983 CDA09_19770 569fc1c1881a1e1b0e8f23fc306fcc2d 673 Gene3D G3DSA:3.30.450.20 326 449 3.0E-26 T 01-11-2018 CDA09_19770 569fc1c1881a1e1b0e8f23fc306fcc2d 673 SMART SM00387 580 673 2.6E-7 T 01-11-2018 IPR003594 Histidine kinase/HSP90-like ATPase CDA09_19770 569fc1c1881a1e1b0e8f23fc306fcc2d 673 Gene3D G3DSA:3.30.565.10 540 673 9.8E-32 T 01-11-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily CDA09_19770 569fc1c1881a1e1b0e8f23fc306fcc2d 673 SMART SM00091 331 397 1.1E-6 T 01-11-2018 IPR000014 PAS domain CDA09_19770 569fc1c1881a1e1b0e8f23fc306fcc2d 673 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 583 671 7.3E-8 T 01-11-2018 IPR003594 Histidine kinase/HSP90-like ATPase CDA09_19770 569fc1c1881a1e1b0e8f23fc306fcc2d 673 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 327 453 2.2E-21 T 01-11-2018 IPR000014 PAS domain CDA09_15345 2f44e299c62ad5108682d6ea85d57971 685 Pfam PF12344 Ultra-violet resistance protein B 564 606 3.9E-21 T 01-11-2018 IPR024759 UvrB, YAD/RRR-motif-containing domain CDA09_15345 2f44e299c62ad5108682d6ea85d57971 685 Pfam PF00271 Helicase conserved C-terminal domain 455 556 6.8E-18 T 01-11-2018 IPR001650 Helicase, C-terminal CDA09_15345 2f44e299c62ad5108682d6ea85d57971 685 Pfam PF02151 UvrB/uvrC motif 641 674 8.0E-8 T 01-11-2018 IPR001943 UVR domain GO:0005515 CDA09_15345 2f44e299c62ad5108682d6ea85d57971 685 SUPERFAMILY SSF52540 50 592 3.06E-38 T 01-11-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CDA09_15345 2f44e299c62ad5108682d6ea85d57971 685 Gene3D G3DSA:3.40.50.300 288 426 1.2E-51 T 01-11-2018 CDA09_15345 2f44e299c62ad5108682d6ea85d57971 685 SMART SM00487 22 438 1.9E-26 T 01-11-2018 IPR014001 Helicase superfamily 1/2, ATP-binding domain CDA09_15345 2f44e299c62ad5108682d6ea85d57971 685 SMART SM00490 472 558 1.6E-20 T 01-11-2018 IPR001650 Helicase, C-terminal CDA09_15345 2f44e299c62ad5108682d6ea85d57971 685 TIGRFAM TIGR00631 uvrb: excinuclease ABC subunit B 18 673 0.0 T 01-11-2018 IPR004807 UvrABC system, subunit B GO:0003677|GO:0005524|GO:0006289|GO:0009380|GO:0016887 CDA09_15345 2f44e299c62ad5108682d6ea85d57971 685 Gene3D G3DSA:3.40.50.300 427 608 3.8E-51 T 01-11-2018 CDA09_15345 2f44e299c62ad5108682d6ea85d57971 685 SUPERFAMILY SSF52540 17 427 3.35E-132 T 01-11-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CDA09_15345 2f44e299c62ad5108682d6ea85d57971 685 Hamap MF_00204 UvrABC system protein B [uvrB]. 16 675 43.7 T 01-11-2018 IPR004807 UvrABC system, subunit B GO:0003677|GO:0005524|GO:0006289|GO:0009380|GO:0016887 CDA09_15345 2f44e299c62ad5108682d6ea85d57971 685 Gene3D G3DSA:4.10.860.10 623 680 6.4E-17 T 01-11-2018 CDA09_15345 2f44e299c62ad5108682d6ea85d57971 685 SUPERFAMILY SSF46600 629 675 6.8E-11 T 01-11-2018 IPR036876 UVR domain superfamily CDA09_15345 2f44e299c62ad5108682d6ea85d57971 685 Pfam PF04851 Type III restriction enzyme, res subunit 53 151 6.5E-9 T 01-11-2018 IPR006935 Helicase/UvrB, N-terminal GO:0003677|GO:0005524|GO:0016787 CDA09_15345 2f44e299c62ad5108682d6ea85d57971 685 Gene3D G3DSA:3.40.50.300 10 253 8.2E-71 T 01-11-2018 CDA09_15690 aa7d2a96d0048822c6f4eef3df9209fd 1055 Gene3D G3DSA:1.20.1640.10 518 1028 0.0 T 01-11-2018 CDA09_15690 aa7d2a96d0048822c6f4eef3df9209fd 1055 Gene3D G3DSA:3.30.2090.10 179 275 0.0 T 01-11-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains CDA09_15690 aa7d2a96d0048822c6f4eef3df9209fd 1055 SUPERFAMILY SSF82714 728 813 2.09E-22 T 01-11-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains CDA09_15690 aa7d2a96d0048822c6f4eef3df9209fd 1055 SUPERFAMILY SSF82866 811 1036 1.15E-41 T 01-11-2018 CDA09_15690 aa7d2a96d0048822c6f4eef3df9209fd 1055 Gene3D G3DSA:1.20.1640.10 8 517 0.0 T 01-11-2018 CDA09_15690 aa7d2a96d0048822c6f4eef3df9209fd 1055 Gene3D G3DSA:3.30.70.1430 38 822 0.0 T 01-11-2018 CDA09_15690 aa7d2a96d0048822c6f4eef3df9209fd 1055 SUPERFAMILY SSF82866 296 497 7.19E-50 T 01-11-2018 CDA09_15690 aa7d2a96d0048822c6f4eef3df9209fd 1055 TIGRFAM TIGR00915 2A0602: RND transporter, hydrophobe/amphiphile efflux-1 (HAE1) family 1 1047 0.0 T 01-11-2018 IPR004764 Hydrophobe/amphiphile efflux-1 HAE1 GO:0006855|GO:0015562|GO:0016021 CDA09_15690 aa7d2a96d0048822c6f4eef3df9209fd 1055 Gene3D G3DSA:3.30.70.1430 572 673 0.0 T 01-11-2018 CDA09_15690 aa7d2a96d0048822c6f4eef3df9209fd 1055 SUPERFAMILY SSF82693 570 674 2.04E-31 T 01-11-2018 CDA09_15690 aa7d2a96d0048822c6f4eef3df9209fd 1055 SUPERFAMILY SSF82693 135 330 1.62E-28 T 01-11-2018 CDA09_15690 aa7d2a96d0048822c6f4eef3df9209fd 1055 Gene3D G3DSA:3.30.70.1440 674 870 0.0 T 01-11-2018 CDA09_15690 aa7d2a96d0048822c6f4eef3df9209fd 1055 SUPERFAMILY SSF82693 38 131 6.54E-27 T 01-11-2018 CDA09_15690 aa7d2a96d0048822c6f4eef3df9209fd 1055 Gene3D G3DSA:3.30.70.1320 133 332 0.0 T 01-11-2018 CDA09_15690 aa7d2a96d0048822c6f4eef3df9209fd 1055 Gene3D G3DSA:3.30.2090.10 726 814 0.0 T 01-11-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains CDA09_15690 aa7d2a96d0048822c6f4eef3df9209fd 1055 PRINTS PR00702 Acriflavin resistance protein family signature 445 468 5.0E-111 T 01-11-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 CDA09_15690 aa7d2a96d0048822c6f4eef3df9209fd 1055 PRINTS PR00702 Acriflavin resistance protein family signature 391 415 5.0E-111 T 01-11-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 CDA09_15690 aa7d2a96d0048822c6f4eef3df9209fd 1055 PRINTS PR00702 Acriflavin resistance protein family signature 626 640 5.0E-111 T 01-11-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 CDA09_15690 aa7d2a96d0048822c6f4eef3df9209fd 1055 PRINTS PR00702 Acriflavin resistance protein family signature 8 32 5.0E-111 T 01-11-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 CDA09_15690 aa7d2a96d0048822c6f4eef3df9209fd 1055 PRINTS PR00702 Acriflavin resistance protein family signature 336 359 5.0E-111 T 01-11-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 CDA09_15690 aa7d2a96d0048822c6f4eef3df9209fd 1055 PRINTS PR00702 Acriflavin resistance protein family signature 363 384 5.0E-111 T 01-11-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 CDA09_15690 aa7d2a96d0048822c6f4eef3df9209fd 1055 PRINTS PR00702 Acriflavin resistance protein family signature 36 54 5.0E-111 T 01-11-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 CDA09_15690 aa7d2a96d0048822c6f4eef3df9209fd 1055 PRINTS PR00702 Acriflavin resistance protein family signature 470 493 5.0E-111 T 01-11-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 CDA09_15690 aa7d2a96d0048822c6f4eef3df9209fd 1055 PRINTS PR00702 Acriflavin resistance protein family signature 557 574 5.0E-111 T 01-11-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 CDA09_15690 aa7d2a96d0048822c6f4eef3df9209fd 1055 SUPERFAMILY SSF82714 182 272 7.98E-22 T 01-11-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains CDA09_15690 aa7d2a96d0048822c6f4eef3df9209fd 1055 Pfam PF00873 AcrB/AcrD/AcrF family 1 1032 0.0 T 01-11-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 CDA09_02380 34ced1ac828b63540297f2c2084bfd3a 470 SUPERFAMILY SSF52283 8 470 6.8E-113 T 01-11-2018 CDA09_02380 34ced1ac828b63540297f2c2084bfd3a 470 ProSitePatterns PS00738 S-adenosyl-L-homocysteine hydrolase signature 1. 82 96 - T 01-11-2018 IPR020082 S-adenosyl-L-homocysteine hydrolase, conserved site GO:0004013 KEGG: 00270+3.3.1.1|MetaCyc: PWY-5041 CDA09_02380 34ced1ac828b63540297f2c2084bfd3a 470 Gene3D G3DSA:3.40.50.1480 11 470 6.0E-238 T 01-11-2018 CDA09_02380 34ced1ac828b63540297f2c2084bfd3a 470 ProSitePatterns PS00739 S-adenosyl-L-homocysteine hydrolase signature 2. 253 269 - T 01-11-2018 IPR020082 S-adenosyl-L-homocysteine hydrolase, conserved site GO:0004013 KEGG: 00270+3.3.1.1|MetaCyc: PWY-5041 CDA09_02380 34ced1ac828b63540297f2c2084bfd3a 470 Pfam PF00670 S-adenosyl-L-homocysteine hydrolase, NAD binding domain 231 390 3.6E-81 T 01-11-2018 IPR015878 S-adenosyl-L-homocysteine hydrolase, NAD binding domain KEGG: 00270+3.3.1.1|MetaCyc: PWY-5041 CDA09_02380 34ced1ac828b63540297f2c2084bfd3a 470 SUPERFAMILY SSF51735 231 390 1.83E-79 T 01-11-2018 IPR036291 NAD(P)-binding domain superfamily CDA09_02380 34ced1ac828b63540297f2c2084bfd3a 470 Pfam PF05221 S-adenosyl-L-homocysteine hydrolase 10 469 1.4E-144 T 01-11-2018 IPR000043 Adenosylhomocysteinase-like KEGG: 00270+3.3.1.1|MetaCyc: PWY-5041 CDA09_02380 34ced1ac828b63540297f2c2084bfd3a 470 Gene3D G3DSA:3.40.50.720 233 390 6.0E-238 T 01-11-2018 CDA09_02380 34ced1ac828b63540297f2c2084bfd3a 470 SMART SM00997 231 390 3.0E-114 T 01-11-2018 IPR015878 S-adenosyl-L-homocysteine hydrolase, NAD binding domain KEGG: 00270+3.3.1.1|MetaCyc: PWY-5041 CDA09_02380 34ced1ac828b63540297f2c2084bfd3a 470 SMART SM00996 10 469 0.0 T 01-11-2018 IPR000043 Adenosylhomocysteinase-like KEGG: 00270+3.3.1.1|MetaCyc: PWY-5041 CDA09_02380 34ced1ac828b63540297f2c2084bfd3a 470 TIGRFAM TIGR00936 ahcY: adenosylhomocysteinase 11 462 2.6E-183 T 01-11-2018 IPR000043 Adenosylhomocysteinase-like KEGG: 00270+3.3.1.1|MetaCyc: PWY-5041 CDA09_02380 34ced1ac828b63540297f2c2084bfd3a 470 Hamap MF_00563 Adenosylhomocysteinase [ahcY]. 6 462 48.174 T 01-11-2018 IPR034373 Adenosylhomocysteinase GO:0004013|GO:0019510|GO:0051287 KEGG: 00270+3.3.1.1|MetaCyc: PWY-5041|Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-2408508|Reactome: R-HSA-5578997 CDA09_02380 34ced1ac828b63540297f2c2084bfd3a 470 PIRSF PIRSF001109 1 470 1.9E-188 T 01-11-2018 IPR000043 Adenosylhomocysteinase-like KEGG: 00270+3.3.1.1|MetaCyc: PWY-5041 CDA09_22550 70d721b8182a4cc39d59fcf6606d852d 93 Pfam PF08681 Protein of unknown function (DUF1778) 9 87 7.2E-26 T 01-11-2018 IPR014795 Vibrio phage ICP1, Orf50 CDA09_22550 70d721b8182a4cc39d59fcf6606d852d 93 Gene3D G3DSA:1.20.5.780 3 89 8.1E-25 T 01-11-2018 CDA09_22550 70d721b8182a4cc39d59fcf6606d852d 93 SUPERFAMILY SSF47598 6 83 1.39E-21 T 01-11-2018 IPR010985 Ribbon-helix-helix GO:0006355 CDA09_00660 50fbff271b5c83b81426a06cd28dbc28 210 SMART SM00448 7 120 1.4E-31 T 01-11-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 CDA09_00660 50fbff271b5c83b81426a06cd28dbc28 210 Gene3D G3DSA:3.40.50.2300 3 136 1.0E-48 T 01-11-2018 CDA09_00660 50fbff271b5c83b81426a06cd28dbc28 210 SMART SM00421 144 201 2.6E-19 T 01-11-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 CDA09_00660 50fbff271b5c83b81426a06cd28dbc28 210 SUPERFAMILY SSF46894 140 203 2.59E-17 T 01-11-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 CDA09_00660 50fbff271b5c83b81426a06cd28dbc28 210 Gene3D G3DSA:1.10.10.10 138 204 1.5E-20 T 01-11-2018 IPR036388 Winged helix-like DNA-binding domain superfamily CDA09_00660 50fbff271b5c83b81426a06cd28dbc28 210 Pfam PF00072 Response regulator receiver domain 9 120 4.6E-25 T 01-11-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 CDA09_00660 50fbff271b5c83b81426a06cd28dbc28 210 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 177 189 1.1E-11 T 01-11-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 CDA09_00660 50fbff271b5c83b81426a06cd28dbc28 210 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 147 161 1.1E-11 T 01-11-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 CDA09_00660 50fbff271b5c83b81426a06cd28dbc28 210 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 161 177 1.1E-11 T 01-11-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 CDA09_00660 50fbff271b5c83b81426a06cd28dbc28 210 Pfam PF00196 Bacterial regulatory proteins, luxR family 146 200 5.9E-19 T 01-11-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 CDA09_00660 50fbff271b5c83b81426a06cd28dbc28 210 ProSitePatterns PS00622 LuxR-type HTH domain signature. 161 188 - T 01-11-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 CDA09_00660 50fbff271b5c83b81426a06cd28dbc28 210 SUPERFAMILY SSF52172 9 160 2.42E-34 T 01-11-2018 IPR011006 CheY-like superfamily CDA09_05745 ceda7d1848ce91e8d9f4c5b942188635 629 Gene3D G3DSA:1.20.120.160 1 134 1.1E-35 T 01-11-2018 IPR036641 HPT domain superfamily GO:0000160 CDA09_05745 ceda7d1848ce91e8d9f4c5b942188635 629 Gene3D G3DSA:1.10.287.560 225 293 1.2E-12 T 01-11-2018 IPR037006 Histidine kinase CheA-like, homodimeric domain superfamily GO:0000155|GO:0006935 CDA09_05745 ceda7d1848ce91e8d9f4c5b942188635 629 Gene3D G3DSA:2.40.50.180 504 564 9.5E-25 T 01-11-2018 CDA09_05745 ceda7d1848ce91e8d9f4c5b942188635 629 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 341 480 4.9E-16 T 01-11-2018 IPR003594 Histidine kinase/HSP90-like ATPase CDA09_05745 ceda7d1848ce91e8d9f4c5b942188635 629 Pfam PF01584 CheW-like domain 486 609 1.7E-18 T 01-11-2018 IPR002545 CheW-like domain GO:0006935|GO:0007165 CDA09_05745 ceda7d1848ce91e8d9f4c5b942188635 629 Gene3D G3DSA:3.30.565.10 294 480 5.6E-58 T 01-11-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily CDA09_05745 ceda7d1848ce91e8d9f4c5b942188635 629 SUPERFAMILY SSF55874 296 479 4.19E-41 T 01-11-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily CDA09_05745 ceda7d1848ce91e8d9f4c5b942188635 629 Pfam PF02895 Signal transducing histidine kinase, homodimeric domain 226 293 3.4E-10 T 01-11-2018 IPR004105 Histidine kinase CheA-like, homodimeric domain GO:0000155|GO:0000160|GO:0004673|GO:0005737|GO:0006935 CDA09_05745 ceda7d1848ce91e8d9f4c5b942188635 629 SMART SM01231 225 293 2.4E-12 T 01-11-2018 IPR004105 Histidine kinase CheA-like, homodimeric domain GO:0000155|GO:0000160|GO:0004673|GO:0005737|GO:0006935 CDA09_05745 ceda7d1848ce91e8d9f4c5b942188635 629 SMART SM00073 1 98 3.7E-26 T 01-11-2018 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160 CDA09_05745 ceda7d1848ce91e8d9f4c5b942188635 629 SMART SM00387 338 481 3.7E-23 T 01-11-2018 IPR003594 Histidine kinase/HSP90-like ATPase CDA09_05745 ceda7d1848ce91e8d9f4c5b942188635 629 SUPERFAMILY SSF47384 226 294 2.94E-8 T 01-11-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 CDA09_05745 ceda7d1848ce91e8d9f4c5b942188635 629 SMART SM00260 473 607 4.3E-20 T 01-11-2018 IPR002545 CheW-like domain GO:0006935|GO:0007165 CDA09_05745 ceda7d1848ce91e8d9f4c5b942188635 629 PRINTS PR00344 Bacterial sensor protein C-terminal signature 465 478 1.5E-12 T 01-11-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 CDA09_05745 ceda7d1848ce91e8d9f4c5b942188635 629 PRINTS PR00344 Bacterial sensor protein C-terminal signature 441 459 1.5E-12 T 01-11-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 CDA09_05745 ceda7d1848ce91e8d9f4c5b942188635 629 PRINTS PR00344 Bacterial sensor protein C-terminal signature 383 397 1.5E-12 T 01-11-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 CDA09_05745 ceda7d1848ce91e8d9f4c5b942188635 629 SUPERFAMILY SSF47226 1 122 5.63E-30 T 01-11-2018 IPR036641 HPT domain superfamily GO:0000160 CDA09_05745 ceda7d1848ce91e8d9f4c5b942188635 629 SUPERFAMILY SSF50341 480 607 8.76E-23 T 01-11-2018 IPR036061 CheW-like domain superfamily GO:0006935|GO:0007165 CDA09_05745 ceda7d1848ce91e8d9f4c5b942188635 629 Gene3D G3DSA:2.30.30.40 481 602 9.5E-25 T 01-11-2018 CDA09_05745 ceda7d1848ce91e8d9f4c5b942188635 629 Pfam PF01627 Hpt domain 3 103 7.3E-17 T 01-11-2018 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160 CDA09_16635 c6a8beab8f6c910e540ed6e7b319d5d0 746 Gene3D G3DSA:3.40.1090.10 514 648 3.2E-13 T 01-11-2018 CDA09_16635 c6a8beab8f6c910e540ed6e7b319d5d0 746 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 232 248 8.2E-25 T 01-11-2018 CDA09_16635 c6a8beab8f6c910e540ed6e7b319d5d0 746 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 257 279 8.2E-25 T 01-11-2018 CDA09_16635 c6a8beab8f6c910e540ed6e7b319d5d0 746 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 7 26 8.2E-25 T 01-11-2018 CDA09_16635 c6a8beab8f6c910e540ed6e7b319d5d0 746 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 148 166 8.2E-25 T 01-11-2018 CDA09_16635 c6a8beab8f6c910e540ed6e7b319d5d0 746 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 103 121 8.2E-25 T 01-11-2018 CDA09_16635 c6a8beab8f6c910e540ed6e7b319d5d0 746 Gene3D G3DSA:3.50.50.60 8 310 7.8E-105 T 01-11-2018 IPR036188 FAD/NAD(P)-binding domain superfamily CDA09_16635 c6a8beab8f6c910e540ed6e7b319d5d0 746 Pfam PF14759 Reductase C-terminal 321 404 7.8E-7 T 01-11-2018 IPR028202 Reductase, C-terminal CDA09_16635 c6a8beab8f6c910e540ed6e7b319d5d0 746 SUPERFAMILY SSF51905 147 311 2.1E-34 T 01-11-2018 IPR036188 FAD/NAD(P)-binding domain superfamily CDA09_16635 c6a8beab8f6c910e540ed6e7b319d5d0 746 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 233 247 5.6E-15 T 01-11-2018 CDA09_16635 c6a8beab8f6c910e540ed6e7b319d5d0 746 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 272 279 5.6E-15 T 01-11-2018 CDA09_16635 c6a8beab8f6c910e540ed6e7b319d5d0 746 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 148 173 5.6E-15 T 01-11-2018 CDA09_16635 c6a8beab8f6c910e540ed6e7b319d5d0 746 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 6 28 5.6E-15 T 01-11-2018 CDA09_16635 c6a8beab8f6c910e540ed6e7b319d5d0 746 Pfam PF12536 Patatin phospholipase 649 744 1.2E-17 T 01-11-2018 IPR021095 Protein of unknown function DUF3734 CDA09_16635 c6a8beab8f6c910e540ed6e7b319d5d0 746 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 6 302 1.1E-63 T 01-11-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 CDA09_16635 c6a8beab8f6c910e540ed6e7b319d5d0 746 Gene3D G3DSA:3.30.390.30 317 409 1.4E-8 T 01-11-2018 IPR016156 FAD/NAD-linked reductase, dimerisation domain superfamily GO:0016491|GO:0050660|GO:0055114 CDA09_16635 c6a8beab8f6c910e540ed6e7b319d5d0 746 Gene3D G3DSA:3.50.50.60 116 239 7.8E-105 T 01-11-2018 IPR036188 FAD/NAD(P)-binding domain superfamily CDA09_16635 c6a8beab8f6c910e540ed6e7b319d5d0 746 SUPERFAMILY SSF52151 413 743 5.41E-44 T 01-11-2018 IPR016035 Acyl transferase/acyl hydrolase/lysophospholipase CDA09_16635 c6a8beab8f6c910e540ed6e7b319d5d0 746 SUPERFAMILY SSF51905 1 193 5.59E-47 T 01-11-2018 IPR036188 FAD/NAD(P)-binding domain superfamily CDA09_16635 c6a8beab8f6c910e540ed6e7b319d5d0 746 Pfam PF01734 Patatin-like phospholipase 414 611 6.1E-24 T 01-11-2018 IPR002641 Patatin-like phospholipase domain GO:0006629 CDA09_16635 c6a8beab8f6c910e540ed6e7b319d5d0 746 SUPERFAMILY SSF55424 314 407 5.49E-13 T 01-11-2018 IPR016156 FAD/NAD-linked reductase, dimerisation domain superfamily GO:0016491|GO:0050660|GO:0055114 CDA09_16635 c6a8beab8f6c910e540ed6e7b319d5d0 746 Gene3D G3DSA:3.40.1090.20 410 480 1.6E-6 T 01-11-2018 CDA09_07055 fcf95b57b4635784730290463867d878 301 Hamap MF_00050 Elongation factor Ts [tsf]. 1 296 73.936 T 01-11-2018 IPR001816 Translation elongation factor EFTs/EF1B GO:0003746|GO:0005622|GO:0006414 Reactome: R-HSA-5389840 CDA09_07055 fcf95b57b4635784730290463867d878 301 TIGRFAM TIGR00116 tsf: translation elongation factor Ts 1 296 1.7E-90 T 01-11-2018 IPR001816 Translation elongation factor EFTs/EF1B GO:0003746|GO:0005622|GO:0006414 Reactome: R-HSA-5389840 CDA09_07055 fcf95b57b4635784730290463867d878 301 Gene3D G3DSA:3.30.479.20 155 278 1.6E-32 T 01-11-2018 IPR036402 Elongation factor Ts, dimerisation domain superfamily Reactome: R-HSA-5389840 CDA09_07055 fcf95b57b4635784730290463867d878 301 SUPERFAMILY SSF54713 56 147 3.79E-22 T 01-11-2018 IPR036402 Elongation factor Ts, dimerisation domain superfamily Reactome: R-HSA-5389840 CDA09_07055 fcf95b57b4635784730290463867d878 301 Pfam PF00889 Elongation factor TS 74 279 1.2E-62 T 01-11-2018 IPR014039 Translation elongation factor EFTs/EF1B, dimerisation GO:0003746|GO:0006414 Reactome: R-HSA-5389840 CDA09_07055 fcf95b57b4635784730290463867d878 301 Gene3D G3DSA:1.10.286.20 192 244 1.6E-32 T 01-11-2018 CDA09_07055 fcf95b57b4635784730290463867d878 301 Gene3D G3DSA:3.30.479.20 57 149 2.5E-24 T 01-11-2018 IPR036402 Elongation factor Ts, dimerisation domain superfamily Reactome: R-HSA-5389840 CDA09_07055 fcf95b57b4635784730290463867d878 301 ProSitePatterns PS01127 Elongation factor Ts signature 2. 77 87 - T 01-11-2018 IPR018101 Translation elongation factor Ts, conserved site GO:0003746|GO:0005622|GO:0006414 Reactome: R-HSA-5389840 CDA09_07055 fcf95b57b4635784730290463867d878 301 Gene3D G3DSA:1.10.8.10 1 56 7.4E-22 T 01-11-2018 CDA09_07055 fcf95b57b4635784730290463867d878 301 SUPERFAMILY SSF54713 151 296 6.54E-42 T 01-11-2018 IPR036402 Elongation factor Ts, dimerisation domain superfamily Reactome: R-HSA-5389840 CDA09_07055 fcf95b57b4635784730290463867d878 301 SUPERFAMILY SSF46934 3 56 3.57E-14 T 01-11-2018 IPR009060 UBA-like superfamily GO:0005515 CDA09_19800 d80c70ecebbbcd1246ad5ca971dda8ee 687 PRINTS PR00344 Bacterial sensor protein C-terminal signature 461 475 2.3E-17 T 01-11-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 CDA09_19800 d80c70ecebbbcd1246ad5ca971dda8ee 687 PRINTS PR00344 Bacterial sensor protein C-terminal signature 479 489 2.3E-17 T 01-11-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 CDA09_19800 d80c70ecebbbcd1246ad5ca971dda8ee 687 PRINTS PR00344 Bacterial sensor protein C-terminal signature 516 529 2.3E-17 T 01-11-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 CDA09_19800 d80c70ecebbbcd1246ad5ca971dda8ee 687 PRINTS PR00344 Bacterial sensor protein C-terminal signature 492 510 2.3E-17 T 01-11-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 CDA09_19800 d80c70ecebbbcd1246ad5ca971dda8ee 687 SUPERFAMILY SSF55874 360 530 1.05E-39 T 01-11-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily CDA09_19800 d80c70ecebbbcd1246ad5ca971dda8ee 687 SUPERFAMILY SSF52172 557 674 5.27E-26 T 01-11-2018 IPR011006 CheY-like superfamily CDA09_19800 d80c70ecebbbcd1246ad5ca971dda8ee 687 SMART SM00448 555 667 2.5E-18 T 01-11-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 CDA09_19800 d80c70ecebbbcd1246ad5ca971dda8ee 687 Gene3D G3DSA:3.30.565.10 371 539 1.1E-43 T 01-11-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily CDA09_19800 d80c70ecebbbcd1246ad5ca971dda8ee 687 SMART SM00388 304 369 2.0E-9 T 01-11-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 CDA09_19800 d80c70ecebbbcd1246ad5ca971dda8ee 687 Gene3D G3DSA:1.10.287.130 301 367 9.8E-19 T 01-11-2018 CDA09_19800 d80c70ecebbbcd1246ad5ca971dda8ee 687 Pfam PF00512 His Kinase A (phospho-acceptor) domain 305 368 2.9E-10 T 01-11-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 CDA09_19800 d80c70ecebbbcd1246ad5ca971dda8ee 687 SMART SM00091 10 76 16.0 T 01-11-2018 IPR000014 PAS domain CDA09_19800 d80c70ecebbbcd1246ad5ca971dda8ee 687 SMART SM00091 176 242 0.0013 T 01-11-2018 IPR000014 PAS domain CDA09_19800 d80c70ecebbbcd1246ad5ca971dda8ee 687 Gene3D G3DSA:3.30.450.20 3 130 5.1E-9 T 01-11-2018 CDA09_19800 d80c70ecebbbcd1246ad5ca971dda8ee 687 SMART SM00387 410 532 2.6E-29 T 01-11-2018 IPR003594 Histidine kinase/HSP90-like ATPase CDA09_19800 d80c70ecebbbcd1246ad5ca971dda8ee 687 Pfam PF08448 PAS fold 183 290 1.6E-17 T 01-11-2018 IPR013656 PAS fold-4 CDA09_19800 d80c70ecebbbcd1246ad5ca971dda8ee 687 SUPERFAMILY SSF55785 166 287 1.43E-19 T 01-11-2018 IPR035965 PAS domain superfamily CDA09_19800 d80c70ecebbbcd1246ad5ca971dda8ee 687 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 172 296 6.6E-16 T 01-11-2018 IPR000014 PAS domain CDA09_19800 d80c70ecebbbcd1246ad5ca971dda8ee 687 Pfam PF00072 Response regulator receiver domain 557 668 2.7E-14 T 01-11-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 CDA09_19800 d80c70ecebbbcd1246ad5ca971dda8ee 687 Gene3D G3DSA:3.30.450.20 161 300 4.3E-25 T 01-11-2018 CDA09_19800 d80c70ecebbbcd1246ad5ca971dda8ee 687 SUPERFAMILY SSF47384 298 366 7.85E-10 T 01-11-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 CDA09_19800 d80c70ecebbbcd1246ad5ca971dda8ee 687 SMART SM00086 247 289 0.0092 T 01-11-2018 IPR001610 PAC motif CDA09_19800 d80c70ecebbbcd1246ad5ca971dda8ee 687 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 411 531 1.8E-20 T 01-11-2018 IPR003594 Histidine kinase/HSP90-like ATPase CDA09_19800 d80c70ecebbbcd1246ad5ca971dda8ee 687 Gene3D G3DSA:3.40.50.2300 555 677 1.1E-24 T 01-11-2018 CDA09_19800 d80c70ecebbbcd1246ad5ca971dda8ee 687 Pfam PF12860 PAS fold 16 130 5.0E-38 T 01-11-2018 CDA09_19800 d80c70ecebbbcd1246ad5ca971dda8ee 687 SUPERFAMILY SSF55785 22 132 8.64E-5 T 01-11-2018 IPR035965 PAS domain superfamily CDA09_15870 605cf339a739d87a0d0627dda292efb6 869 TIGRFAM TIGR00117 acnB: aconitate hydratase 2 1 861 0.0 T 01-11-2018 IPR004406 Aconitase B GO:0003994|GO:0005829|GO:0006099|GO:0051539 KEGG: 00020+4.2.1.3|KEGG: 00630+4.2.1.3|KEGG: 00640+4.2.1.99|KEGG: 00720+4.2.1.3|MetaCyc: PWY-5747 CDA09_15870 605cf339a739d87a0d0627dda292efb6 869 Gene3D G3DSA:3.20.19.10 167 367 3.5E-69 T 01-11-2018 IPR015928 Aconitase/3-isopropylmalate dehydratase, swivel KEGG: 00290+4.2.1.33 CDA09_15870 605cf339a739d87a0d0627dda292efb6 869 SUPERFAMILY SSF53732 383 861 6.54E-146 T 01-11-2018 IPR036008 Aconitase, iron-sulfur domain KEGG: 00290+4.2.1.33 CDA09_15870 605cf339a739d87a0d0627dda292efb6 869 Gene3D G3DSA:3.30.499.10 411 538 9.3E-148 T 01-11-2018 IPR015931 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha, subdomain 1/3 KEGG: 00290+4.2.1.33 CDA09_15870 605cf339a739d87a0d0627dda292efb6 869 Gene3D G3DSA:3.40.1060.10 391 690 9.3E-148 T 01-11-2018 IPR015932 Aconitase, domain 2 KEGG: 00020+4.2.1.3|KEGG: 00630+4.2.1.3|KEGG: 00720+4.2.1.3|Reactome: R-HSA-1268020|Reactome: R-HSA-71403 CDA09_15870 605cf339a739d87a0d0627dda292efb6 869 Pfam PF00330 Aconitase family (aconitate hydratase) 479 826 1.8E-39 T 01-11-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain KEGG: 00290+4.2.1.33 CDA09_15870 605cf339a739d87a0d0627dda292efb6 869 Pfam PF11791 Aconitate B N-terminal domain 4 160 1.7E-59 T 01-11-2018 IPR015933 Aconitase B, HEAT-like domain GO:0003994|GO:0006099 KEGG: 00020+4.2.1.3|KEGG: 00630+4.2.1.3|KEGG: 00640+4.2.1.99|KEGG: 00720+4.2.1.3|MetaCyc: PWY-5747 CDA09_15870 605cf339a739d87a0d0627dda292efb6 869 Gene3D G3DSA:1.25.40.310 1 165 6.3E-61 T 01-11-2018 IPR036288 Aconitase B, HEAT-like domain superfamily GO:0003994|GO:0006099 KEGG: 00020+4.2.1.3|KEGG: 00630+4.2.1.3|KEGG: 00640+4.2.1.99|KEGG: 00720+4.2.1.3|MetaCyc: PWY-5747 CDA09_15870 605cf339a739d87a0d0627dda292efb6 869 PIRSF PIRSF036687 1 867 0.0 T 01-11-2018 IPR004406 Aconitase B GO:0003994|GO:0005829|GO:0006099|GO:0051539 KEGG: 00020+4.2.1.3|KEGG: 00630+4.2.1.3|KEGG: 00640+4.2.1.99|KEGG: 00720+4.2.1.3|MetaCyc: PWY-5747 CDA09_15870 605cf339a739d87a0d0627dda292efb6 869 ProSitePatterns PS00450 Aconitase family signature 1. 711 728 - T 01-11-2018 IPR018136 Aconitase family, 4Fe-4S cluster binding site KEGG: 00290+4.2.1.33 CDA09_15870 605cf339a739d87a0d0627dda292efb6 869 SUPERFAMILY SSF52016 167 378 1.49E-64 T 01-11-2018 CDA09_15870 605cf339a739d87a0d0627dda292efb6 869 Pfam PF06434 Aconitate hydratase 2 N-terminus 172 388 1.1E-92 T 01-11-2018 IPR015929 Aconitase B, swivel GO:0003994|GO:0006099 KEGG: 00020+4.2.1.3|KEGG: 00630+4.2.1.3|KEGG: 00640+4.2.1.99|KEGG: 00720+4.2.1.3|MetaCyc: PWY-5747 CDA09_15870 605cf339a739d87a0d0627dda292efb6 869 SUPERFAMILY SSF74778 2 164 1.07E-60 T 01-11-2018 IPR036288 Aconitase B, HEAT-like domain superfamily GO:0003994|GO:0006099 KEGG: 00020+4.2.1.3|KEGG: 00630+4.2.1.3|KEGG: 00640+4.2.1.99|KEGG: 00720+4.2.1.3|MetaCyc: PWY-5747 CDA09_15870 605cf339a739d87a0d0627dda292efb6 869 Gene3D G3DSA:3.30.499.10 692 869 3.8E-64 T 01-11-2018 IPR015931 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha, subdomain 1/3 KEGG: 00290+4.2.1.33 CDA09_01645 5834b657d9dd7bf93c96d7cb92e7d477 683 SUPERFAMILY SSF50341 412 544 1.83E-21 T 01-11-2018 IPR036061 CheW-like domain superfamily GO:0006935|GO:0007165 CDA09_01645 5834b657d9dd7bf93c96d7cb92e7d477 683 Pfam PF01584 CheW-like domain 418 544 2.7E-13 T 01-11-2018 IPR002545 CheW-like domain GO:0006935|GO:0007165 CDA09_01645 5834b657d9dd7bf93c96d7cb92e7d477 683 SMART SM01231 124 225 0.0076 T 01-11-2018 IPR004105 Histidine kinase CheA-like, homodimeric domain GO:0000155|GO:0000160|GO:0004673|GO:0005737|GO:0006935 CDA09_01645 5834b657d9dd7bf93c96d7cb92e7d477 683 Gene3D G3DSA:3.30.565.10 224 412 8.1E-47 T 01-11-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily CDA09_01645 5834b657d9dd7bf93c96d7cb92e7d477 683 SUPERFAMILY SSF55874 228 410 3.14E-36 T 01-11-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily CDA09_01645 5834b657d9dd7bf93c96d7cb92e7d477 683 SUPERFAMILY SSF47226 4 108 1.14E-21 T 01-11-2018 IPR036641 HPT domain superfamily GO:0000160 CDA09_01645 5834b657d9dd7bf93c96d7cb92e7d477 683 Pfam PF01627 Hpt domain 7 94 1.5E-14 T 01-11-2018 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160 CDA09_01645 5834b657d9dd7bf93c96d7cb92e7d477 683 SMART SM00073 3 101 2.8E-16 T 01-11-2018 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160 CDA09_01645 5834b657d9dd7bf93c96d7cb92e7d477 683 Gene3D G3DSA:1.20.120.160 4 115 1.2E-20 T 01-11-2018 IPR036641 HPT domain superfamily GO:0000160 CDA09_01645 5834b657d9dd7bf93c96d7cb92e7d477 683 SMART SM00387 270 413 9.4E-21 T 01-11-2018 IPR003594 Histidine kinase/HSP90-like ATPase CDA09_01645 5834b657d9dd7bf93c96d7cb92e7d477 683 SMART SM00260 405 544 5.4E-9 T 01-11-2018 IPR002545 CheW-like domain GO:0006935|GO:0007165 CDA09_01645 5834b657d9dd7bf93c96d7cb92e7d477 683 Pfam PF02895 Signal transducing histidine kinase, homodimeric domain 126 224 1.0E-5 T 01-11-2018 IPR004105 Histidine kinase CheA-like, homodimeric domain GO:0000155|GO:0000160|GO:0004673|GO:0005737|GO:0006935 CDA09_01645 5834b657d9dd7bf93c96d7cb92e7d477 683 SUPERFAMILY SSF52172 564 683 1.21E-36 T 01-11-2018 IPR011006 CheY-like superfamily CDA09_01645 5834b657d9dd7bf93c96d7cb92e7d477 683 Pfam PF00072 Response regulator receiver domain 567 678 1.3E-23 T 01-11-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 CDA09_01645 5834b657d9dd7bf93c96d7cb92e7d477 683 PRINTS PR00344 Bacterial sensor protein C-terminal signature 397 410 2.3E-12 T 01-11-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 CDA09_01645 5834b657d9dd7bf93c96d7cb92e7d477 683 PRINTS PR00344 Bacterial sensor protein C-terminal signature 373 391 2.3E-12 T 01-11-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 CDA09_01645 5834b657d9dd7bf93c96d7cb92e7d477 683 PRINTS PR00344 Bacterial sensor protein C-terminal signature 315 329 2.3E-12 T 01-11-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 CDA09_01645 5834b657d9dd7bf93c96d7cb92e7d477 683 Gene3D G3DSA:2.40.50.180 436 499 6.5E-25 T 01-11-2018 CDA09_01645 5834b657d9dd7bf93c96d7cb92e7d477 683 SMART SM00448 565 679 4.0E-36 T 01-11-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 CDA09_01645 5834b657d9dd7bf93c96d7cb92e7d477 683 Gene3D G3DSA:2.30.30.40 413 539 6.5E-25 T 01-11-2018 CDA09_01645 5834b657d9dd7bf93c96d7cb92e7d477 683 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 273 412 7.5E-14 T 01-11-2018 IPR003594 Histidine kinase/HSP90-like ATPase CDA09_01645 5834b657d9dd7bf93c96d7cb92e7d477 683 Gene3D G3DSA:3.40.50.12740 564 683 2.2E-37 T 01-11-2018 CDA09_00245 02ee9f355afc3671c1cda6a49dd93705 861 Gene3D G3DSA:1.10.460.10 160 609 5.9E-164 T 01-11-2018 IPR013824 DNA topoisomerase, type IA, central region, subdomain 1 CDA09_00245 02ee9f355afc3671c1cda6a49dd93705 861 Gene3D G3DSA:1.10.290.10 288 416 5.9E-164 T 01-11-2018 IPR013826 DNA topoisomerase, type IA, central region, subdomain 3 CDA09_00245 02ee9f355afc3671c1cda6a49dd93705 861 SMART SM00437 279 561 7.4E-74 T 01-11-2018 IPR003602 DNA topoisomerase, type IA, DNA-binding domain GO:0003677|GO:0003916|GO:0006265 CDA09_00245 02ee9f355afc3671c1cda6a49dd93705 861 SUPERFAMILY SSF56712 3 614 9.03E-173 T 01-11-2018 IPR023405 DNA topoisomerase, type IA, core domain CDA09_00245 02ee9f355afc3671c1cda6a49dd93705 861 SMART SM00493 3 126 9.0E-13 T 01-11-2018 IPR006171 TOPRIM domain CDA09_00245 02ee9f355afc3671c1cda6a49dd93705 861 TIGRFAM TIGR01056 topB: DNA topoisomerase III 3 621 5.7E-169 T 01-11-2018 IPR005738 DNA topoisomerase III GO:0003677|GO:0003916|GO:0006265 CDA09_00245 02ee9f355afc3671c1cda6a49dd93705 861 Gene3D G3DSA:2.70.20.10 215 492 5.9E-164 T 01-11-2018 IPR013825 DNA topoisomerase, type IA, central region, subdomain 2 CDA09_00245 02ee9f355afc3671c1cda6a49dd93705 861 ProSitePatterns PS00396 Prokaryotic DNA topoisomerase I active site. 316 331 - T 01-11-2018 IPR023406 DNA topoisomerase, type IA, active site GO:0003917 CDA09_00245 02ee9f355afc3671c1cda6a49dd93705 861 SMART SM00436 126 221 2.3E-22 T 01-11-2018 IPR003601 DNA topoisomerase, type IA, domain 2 GO:0003677|GO:0003916|GO:0006265 CDA09_00245 02ee9f355afc3671c1cda6a49dd93705 861 Pfam PF01131 DNA topoisomerase 155 599 1.4E-114 T 01-11-2018 IPR013497 DNA topoisomerase, type IA, central GO:0003677|GO:0003916|GO:0006265 CDA09_00245 02ee9f355afc3671c1cda6a49dd93705 861 Gene3D G3DSA:3.40.50.140 3 153 1.0E-46 T 01-11-2018 CDA09_00245 02ee9f355afc3671c1cda6a49dd93705 861 Pfam PF13342 C-terminal repeat of topoisomerase 651 709 1.5E-19 T 01-11-2018 IPR025589 Topoisomerase C-terminal repeat CDA09_00245 02ee9f355afc3671c1cda6a49dd93705 861 Pfam PF13342 C-terminal repeat of topoisomerase 757 817 1.3E-17 T 01-11-2018 IPR025589 Topoisomerase C-terminal repeat CDA09_00245 02ee9f355afc3671c1cda6a49dd93705 861 Pfam PF01751 Toprim domain 4 132 5.9E-10 T 01-11-2018 IPR006171 TOPRIM domain CDA09_00245 02ee9f355afc3671c1cda6a49dd93705 861 PRINTS PR00417 Prokaryotic DNA topoisomerase I signature 100 113 1.1E-26 T 01-11-2018 IPR013497 DNA topoisomerase, type IA, central GO:0003677|GO:0003916|GO:0006265 CDA09_00245 02ee9f355afc3671c1cda6a49dd93705 861 PRINTS PR00417 Prokaryotic DNA topoisomerase I signature 524 538 1.1E-26 T 01-11-2018 IPR013497 DNA topoisomerase, type IA, central GO:0003677|GO:0003916|GO:0006265 CDA09_00245 02ee9f355afc3671c1cda6a49dd93705 861 PRINTS PR00417 Prokaryotic DNA topoisomerase I signature 402 418 1.1E-26 T 01-11-2018 IPR013497 DNA topoisomerase, type IA, central GO:0003677|GO:0003916|GO:0006265 CDA09_00245 02ee9f355afc3671c1cda6a49dd93705 861 PRINTS PR00417 Prokaryotic DNA topoisomerase I signature 191 209 1.1E-26 T 01-11-2018 IPR013497 DNA topoisomerase, type IA, central GO:0003677|GO:0003916|GO:0006265 CDA09_00245 02ee9f355afc3671c1cda6a49dd93705 861 PRINTS PR00417 Prokaryotic DNA topoisomerase I signature 322 331 1.1E-26 T 01-11-2018 IPR013497 DNA topoisomerase, type IA, central GO:0003677|GO:0003916|GO:0006265 CDA09_13845 4303dec0ebeaa5f48ae9855fac67e0a1 424 ProSitePatterns PS00086 Cytochrome P450 cysteine heme-iron ligand signature. 366 375 - T 01-11-2018 IPR017972 Cytochrome P450, conserved site GO:0016705|GO:0055114 CDA09_13845 4303dec0ebeaa5f48ae9855fac67e0a1 424 PRINTS PR00359 B-class P450 signature 103 114 4.6E-29 T 01-11-2018 IPR002397 Cytochrome P450, B-class GO:0005506|GO:0020037|GO:0055114 CDA09_13845 4303dec0ebeaa5f48ae9855fac67e0a1 424 PRINTS PR00359 B-class P450 signature 343 358 4.6E-29 T 01-11-2018 IPR002397 Cytochrome P450, B-class GO:0005506|GO:0020037|GO:0055114 CDA09_13845 4303dec0ebeaa5f48ae9855fac67e0a1 424 PRINTS PR00359 B-class P450 signature 373 384 4.6E-29 T 01-11-2018 IPR002397 Cytochrome P450, B-class GO:0005506|GO:0020037|GO:0055114 CDA09_13845 4303dec0ebeaa5f48ae9855fac67e0a1 424 PRINTS PR00359 B-class P450 signature 315 342 4.6E-29 T 01-11-2018 IPR002397 Cytochrome P450, B-class GO:0005506|GO:0020037|GO:0055114 CDA09_13845 4303dec0ebeaa5f48ae9855fac67e0a1 424 PRINTS PR00359 B-class P450 signature 167 182 4.6E-29 T 01-11-2018 IPR002397 Cytochrome P450, B-class GO:0005506|GO:0020037|GO:0055114 CDA09_13845 4303dec0ebeaa5f48ae9855fac67e0a1 424 PRINTS PR00359 B-class P450 signature 298 309 4.6E-29 T 01-11-2018 IPR002397 Cytochrome P450, B-class GO:0005506|GO:0020037|GO:0055114 CDA09_13845 4303dec0ebeaa5f48ae9855fac67e0a1 424 PRINTS PR00359 B-class P450 signature 364 373 4.6E-29 T 01-11-2018 IPR002397 Cytochrome P450, B-class GO:0005506|GO:0020037|GO:0055114 CDA09_13845 4303dec0ebeaa5f48ae9855fac67e0a1 424 PRINTS PR00359 B-class P450 signature 217 239 4.6E-29 T 01-11-2018 IPR002397 Cytochrome P450, B-class GO:0005506|GO:0020037|GO:0055114 CDA09_13845 4303dec0ebeaa5f48ae9855fac67e0a1 424 SUPERFAMILY SSF48264 25 423 3.93E-76 T 01-11-2018 IPR036396 Cytochrome P450 superfamily GO:0005506|GO:0016705|GO:0020037|GO:0055114 CDA09_13845 4303dec0ebeaa5f48ae9855fac67e0a1 424 Gene3D G3DSA:1.10.630.10 3 424 7.2E-90 T 01-11-2018 IPR036396 Cytochrome P450 superfamily GO:0005506|GO:0016705|GO:0020037|GO:0055114 CDA09_13845 4303dec0ebeaa5f48ae9855fac67e0a1 424 PRINTS PR00385 P450 superfamily signature 373 384 4.6E-6 T 01-11-2018 IPR001128 Cytochrome P450 GO:0005506|GO:0016705|GO:0020037|GO:0055114 CDA09_13845 4303dec0ebeaa5f48ae9855fac67e0a1 424 PRINTS PR00385 P450 superfamily signature 298 309 4.6E-6 T 01-11-2018 IPR001128 Cytochrome P450 GO:0005506|GO:0016705|GO:0020037|GO:0055114 CDA09_13845 4303dec0ebeaa5f48ae9855fac67e0a1 424 PRINTS PR00385 P450 superfamily signature 264 281 4.6E-6 T 01-11-2018 IPR001128 Cytochrome P450 GO:0005506|GO:0016705|GO:0020037|GO:0055114 CDA09_13845 4303dec0ebeaa5f48ae9855fac67e0a1 424 PRINTS PR00385 P450 superfamily signature 364 373 4.6E-6 T 01-11-2018 IPR001128 Cytochrome P450 GO:0005506|GO:0016705|GO:0020037|GO:0055114 CDA09_13845 4303dec0ebeaa5f48ae9855fac67e0a1 424 PRINTS PR00385 P450 superfamily signature 281 294 4.6E-6 T 01-11-2018 IPR001128 Cytochrome P450 GO:0005506|GO:0016705|GO:0020037|GO:0055114 CDA09_13845 4303dec0ebeaa5f48ae9855fac67e0a1 424 Pfam PF00067 Cytochrome P450 204 408 1.2E-29 T 01-11-2018 IPR001128 Cytochrome P450 GO:0005506|GO:0016705|GO:0020037|GO:0055114 CDA09_10800 28ba47948ec9b78cc947ba908c4e085d 81 SUPERFAMILY SSF47336 2 77 4.97E-14 T 01-11-2018 IPR036736 ACP-like superfamily CDA09_10800 28ba47948ec9b78cc947ba908c4e085d 81 Gene3D G3DSA:1.10.1200.10 1 78 1.4E-15 T 01-11-2018 IPR036736 ACP-like superfamily CDA09_10800 28ba47948ec9b78cc947ba908c4e085d 81 Pfam PF00550 Phosphopantetheine attachment site 7 71 1.8E-11 T 01-11-2018 IPR009081 Phosphopantetheine binding ACP domain CDA09_10450 178d96cb498a81a843e88b7b8d8842d8 75 Pfam PF01361 Tautomerase enzyme 2 60 9.8E-16 T 01-11-2018 IPR004370 4-oxalocrotonate tautomerase GO:0006725|GO:0016853 CDA09_10450 178d96cb498a81a843e88b7b8d8842d8 75 TIGRFAM TIGR00013 taut: 4-oxalocrotonate tautomerase family enzyme 1 61 3.3E-17 T 01-11-2018 IPR018191 4-oxalocrotonate tautomerase, Pseudomonas-type GO:0006725|GO:0016853 CDA09_10450 178d96cb498a81a843e88b7b8d8842d8 75 Gene3D G3DSA:3.30.429.10 1 73 8.1E-21 T 01-11-2018 IPR014347 Tautomerase/MIF superfamily CDA09_10450 178d96cb498a81a843e88b7b8d8842d8 75 SUPERFAMILY SSF55331 2 62 1.96E-17 T 01-11-2018 IPR014347 Tautomerase/MIF superfamily CDA09_22955 38da9094d887cb334452d6bcb9601bdc 100 Hamap MF_00739 Urease subunit gamma [ureA]. 1 100 35.492 T 01-11-2018 IPR012010 Urease, gamma subunit GO:0009039|GO:0019627 KEGG: 00220+3.5.1.5|KEGG: 00230+3.5.1.5|KEGG: 00791+3.5.1.5|MetaCyc: PWY-5704 CDA09_22955 38da9094d887cb334452d6bcb9601bdc 100 SUPERFAMILY SSF54111 1 99 7.98E-47 T 01-11-2018 IPR036463 Urease, gamma subunit superfamily GO:0016151|GO:0043419 KEGG: 00220+3.5.1.5|KEGG: 00230+3.5.1.5|KEGG: 00791+3.5.1.5|MetaCyc: PWY-5704 CDA09_22955 38da9094d887cb334452d6bcb9601bdc 100 ProDom PD002319 SUBUNIT GAMMA HYDROLASE UREASE UREA AMIDOHYDROLASE UREASE ALPHA GAMMA/BETA METAL-BINDING 9 99 6.0E-31 T 01-11-2018 IPR002026 Urease, gamma/gamma-beta subunit GO:0016151|GO:0043419 KEGG: 00220+3.5.1.5|KEGG: 00230+3.5.1.5|KEGG: 00791+3.5.1.5|MetaCyc: PWY-5704 CDA09_22955 38da9094d887cb334452d6bcb9601bdc 100 PIRSF PIRSF001223 1 100 2.1E-51 T 01-11-2018 IPR012010 Urease, gamma subunit GO:0009039|GO:0019627 KEGG: 00220+3.5.1.5|KEGG: 00230+3.5.1.5|KEGG: 00791+3.5.1.5|MetaCyc: PWY-5704 CDA09_22955 38da9094d887cb334452d6bcb9601bdc 100 Pfam PF00547 Urease, gamma subunit 1 99 7.1E-48 T 01-11-2018 IPR002026 Urease, gamma/gamma-beta subunit GO:0016151|GO:0043419 KEGG: 00220+3.5.1.5|KEGG: 00230+3.5.1.5|KEGG: 00791+3.5.1.5|MetaCyc: PWY-5704 CDA09_22955 38da9094d887cb334452d6bcb9601bdc 100 Gene3D G3DSA:3.30.280.10 1 100 7.2E-49 T 01-11-2018 IPR036463 Urease, gamma subunit superfamily GO:0016151|GO:0043419 KEGG: 00220+3.5.1.5|KEGG: 00230+3.5.1.5|KEGG: 00791+3.5.1.5|MetaCyc: PWY-5704 CDA09_22955 38da9094d887cb334452d6bcb9601bdc 100 TIGRFAM TIGR00193 urease_gam: urease, gamma subunit 1 99 1.3E-53 T 01-11-2018 IPR002026 Urease, gamma/gamma-beta subunit GO:0016151|GO:0043419 KEGG: 00220+3.5.1.5|KEGG: 00230+3.5.1.5|KEGG: 00791+3.5.1.5|MetaCyc: PWY-5704 CDA09_04955 e3ae044591ecbd46c6050a3d4f53c89d 472 PRINTS PR00145 Argininosuccinate lyase family signature 319 338 2.1E-68 T 01-11-2018 CDA09_04955 e3ae044591ecbd46c6050a3d4f53c89d 472 PRINTS PR00145 Argininosuccinate lyase family signature 202 218 2.1E-68 T 01-11-2018 CDA09_04955 e3ae044591ecbd46c6050a3d4f53c89d 472 PRINTS PR00145 Argininosuccinate lyase family signature 240 264 2.1E-68 T 01-11-2018 CDA09_04955 e3ae044591ecbd46c6050a3d4f53c89d 472 PRINTS PR00145 Argininosuccinate lyase family signature 110 132 2.1E-68 T 01-11-2018 CDA09_04955 e3ae044591ecbd46c6050a3d4f53c89d 472 PRINTS PR00145 Argininosuccinate lyase family signature 284 300 2.1E-68 T 01-11-2018 CDA09_04955 e3ae044591ecbd46c6050a3d4f53c89d 472 PRINTS PR00145 Argininosuccinate lyase family signature 151 171 2.1E-68 T 01-11-2018 CDA09_04955 e3ae044591ecbd46c6050a3d4f53c89d 472 Pfam PF00206 Lyase 15 309 4.2E-76 T 01-11-2018 IPR022761 Fumarate lyase, N-terminal CDA09_04955 e3ae044591ecbd46c6050a3d4f53c89d 472 Pfam PF14698 Argininosuccinate lyase C-terminal 372 446 2.2E-20 T 01-11-2018 IPR029419 Argininosuccinate lyase, C-terminal KEGG: 00220+4.3.2.1|KEGG: 00250+4.3.2.1|MetaCyc: PWY-4983|MetaCyc: PWY-4984|MetaCyc: PWY-5|MetaCyc: PWY-5154|MetaCyc: PWY-7400|Reactome: R-HSA-70635 CDA09_04955 e3ae044591ecbd46c6050a3d4f53c89d 472 PRINTS PR00149 Fumarate lyase superfamily signature 111 129 1.2E-29 T 01-11-2018 IPR000362 Fumarate lyase family CDA09_04955 e3ae044591ecbd46c6050a3d4f53c89d 472 PRINTS PR00149 Fumarate lyase superfamily signature 240 267 1.2E-29 T 01-11-2018 IPR000362 Fumarate lyase family CDA09_04955 e3ae044591ecbd46c6050a3d4f53c89d 472 PRINTS PR00149 Fumarate lyase superfamily signature 156 174 1.2E-29 T 01-11-2018 IPR000362 Fumarate lyase family CDA09_04955 e3ae044591ecbd46c6050a3d4f53c89d 472 PRINTS PR00149 Fumarate lyase superfamily signature 284 300 1.2E-29 T 01-11-2018 IPR000362 Fumarate lyase family CDA09_04955 e3ae044591ecbd46c6050a3d4f53c89d 472 TIGRFAM TIGR00838 argH: argininosuccinate lyase 13 471 8.8E-181 T 01-11-2018 IPR009049 Argininosuccinate lyase GO:0004056|GO:0042450 KEGG: 00220+4.3.2.1|KEGG: 00250+4.3.2.1|MetaCyc: PWY-4983|MetaCyc: PWY-4984|MetaCyc: PWY-5|MetaCyc: PWY-5154|MetaCyc: PWY-7400|Reactome: R-HSA-70635 CDA09_04955 e3ae044591ecbd46c6050a3d4f53c89d 472 Hamap MF_00006 Argininosuccinate lyase [argH]. 11 469 42.855 T 01-11-2018 IPR009049 Argininosuccinate lyase GO:0004056|GO:0042450 KEGG: 00220+4.3.2.1|KEGG: 00250+4.3.2.1|MetaCyc: PWY-4983|MetaCyc: PWY-4984|MetaCyc: PWY-5|MetaCyc: PWY-5154|MetaCyc: PWY-7400|Reactome: R-HSA-70635 CDA09_04955 e3ae044591ecbd46c6050a3d4f53c89d 472 Gene3D G3DSA:1.20.200.10 128 464 1.3E-184 T 01-11-2018 CDA09_04955 e3ae044591ecbd46c6050a3d4f53c89d 472 Gene3D G3DSA:1.10.40.30 369 448 1.3E-184 T 01-11-2018 CDA09_04955 e3ae044591ecbd46c6050a3d4f53c89d 472 SUPERFAMILY SSF48557 13 471 3.46E-145 T 01-11-2018 IPR008948 L-Aspartase-like GO:0003824 CDA09_04955 e3ae044591ecbd46c6050a3d4f53c89d 472 Gene3D G3DSA:1.10.275.10 34 238 1.3E-184 T 01-11-2018 IPR024083 Fumarase/histidase, N-terminal CDA09_04955 e3ae044591ecbd46c6050a3d4f53c89d 472 ProSitePatterns PS00163 Fumarate lyases signature. 284 293 - T 01-11-2018 IPR020557 Fumarate lyase, conserved site GO:0003824 CDA09_17610 acc35fcade4a482f56b03a51aaa38a64 274 SUPERFAMILY SSF55166 141 264 2.88E-22 T 01-11-2018 IPR009045 Hedgehog signalling/DD-peptidase zinc-binding domain superfamily Reactome: R-HSA-373080|Reactome: R-HSA-5358346|Reactome: R-HSA-5362798|Reactome: R-HSA-5632681|Reactome: R-HSA-5632684|Reactome: R-HSA-5635838|Reactome: R-HSA-5658034 CDA09_17610 acc35fcade4a482f56b03a51aaa38a64 274 Pfam PF13539 D-alanyl-D-alanine carboxypeptidase 202 263 8.6E-11 T 01-11-2018 IPR039561 Peptidase M15C GO:0008233 CDA09_17610 acc35fcade4a482f56b03a51aaa38a64 274 Gene3D G3DSA:3.30.1380.10 140 263 1.9E-21 T 01-11-2018 IPR009045 Hedgehog signalling/DD-peptidase zinc-binding domain superfamily Reactome: R-HSA-373080|Reactome: R-HSA-5358346|Reactome: R-HSA-5362798|Reactome: R-HSA-5632681|Reactome: R-HSA-5632684|Reactome: R-HSA-5635838|Reactome: R-HSA-5658034 CDA09_03105 d4f587a83b986e4a345c03a9898dfdfc 314 TIGRFAM TIGR03508 decahem_SO: decaheme c-type cytochrome, DmsE family 39 303 1.8E-86 T 01-11-2018 IPR020015 Decaheme cytochrome, c-type, DmsE CDA09_03105 d4f587a83b986e4a345c03a9898dfdfc 314 SUPERFAMILY SSF48695 39 310 6.17E-41 T 01-11-2018 IPR036280 Multiheme cytochrome superfamily CDA09_03105 d4f587a83b986e4a345c03a9898dfdfc 314 Gene3D G3DSA:3.90.10.10 170 269 2.2E-10 T 01-11-2018 CDA09_03105 d4f587a83b986e4a345c03a9898dfdfc 314 Gene3D G3DSA:3.90.10.10 16 150 2.2E-6 T 01-11-2018 CDA09_03105 d4f587a83b986e4a345c03a9898dfdfc 314 Pfam PF09699 Doubled CXXCH motif (Paired_CXXCH_1) 178 219 4.1E-13 T 01-11-2018 IPR010177 Doubled CXXCH motif CDA09_03105 d4f587a83b986e4a345c03a9898dfdfc 314 Pfam PF09699 Doubled CXXCH motif (Paired_CXXCH_1) 137 169 2.4E-4 T 01-11-2018 IPR010177 Doubled CXXCH motif CDA09_03105 d4f587a83b986e4a345c03a9898dfdfc 314 Pfam PF09699 Doubled CXXCH motif (Paired_CXXCH_1) 226 262 1.6E-12 T 01-11-2018 IPR010177 Doubled CXXCH motif CDA09_03105 d4f587a83b986e4a345c03a9898dfdfc 314 TIGRFAM TIGR01905 paired_CXXCH_1: doubled CXXCH domain 179 218 4.2E-9 T 01-11-2018 IPR010177 Doubled CXXCH motif CDA09_03105 d4f587a83b986e4a345c03a9898dfdfc 314 TIGRFAM TIGR01905 paired_CXXCH_1: doubled CXXCH domain 226 261 1.9E-12 T 01-11-2018 IPR010177 Doubled CXXCH motif CDA09_12000 c34a9a66576efb3cde74e3f4977cf203 393 Pfam PF01053 Cys/Met metabolism PLP-dependent enzyme 6 386 8.7E-128 T 01-11-2018 IPR000277 Cys/Met metabolism, pyridoxal phosphate-dependent enzyme GO:0030170 Reactome: R-HSA-1614558|Reactome: R-HSA-1614603|Reactome: R-HSA-2408508 CDA09_12000 c34a9a66576efb3cde74e3f4977cf203 393 SUPERFAMILY SSF53383 23 387 1.77E-112 T 01-11-2018 IPR015424 Pyridoxal phosphate-dependent transferase CDA09_12000 c34a9a66576efb3cde74e3f4977cf203 393 PIRSF PIRSF001434 1 389 3.0E-137 T 01-11-2018 IPR000277 Cys/Met metabolism, pyridoxal phosphate-dependent enzyme GO:0030170 Reactome: R-HSA-1614558|Reactome: R-HSA-1614603|Reactome: R-HSA-2408508 CDA09_12000 c34a9a66576efb3cde74e3f4977cf203 393 Gene3D G3DSA:3.40.640.10 4 252 1.3E-83 T 01-11-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 CDA09_12000 c34a9a66576efb3cde74e3f4977cf203 393 Gene3D G3DSA:3.90.1150.10 254 393 2.1E-54 T 01-11-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 CDA09_11535 809708f50dfd7d4de0c54fd921389633 176 SUPERFAMILY SSF54211 2 173 1.97E-54 T 01-11-2018 IPR020568 Ribosomal protein S5 domain 2-type fold CDA09_11535 809708f50dfd7d4de0c54fd921389633 176 Pfam PF08714 Formaldehyde-activating enzyme (Fae) 9 172 1.2E-59 T 01-11-2018 IPR014826 Formaldehyde-activating enzyme GO:0016051|GO:0016840 KEGG: 00030+4.1.2.43|KEGG: 00680+4.2.1.147+4.1.2.43|MetaCyc: PWY-1723|MetaCyc: PWY-1861|MetaCyc: PWY-7796 CDA09_11535 809708f50dfd7d4de0c54fd921389633 176 TIGRFAM TIGR03126 one_C_fae: formaldehyde-activating enzyme 23 171 7.4E-40 T 01-11-2018 IPR014826 Formaldehyde-activating enzyme GO:0016051|GO:0016840 KEGG: 00030+4.1.2.43|KEGG: 00680+4.2.1.147+4.1.2.43|MetaCyc: PWY-1723|MetaCyc: PWY-1861|MetaCyc: PWY-7796 CDA09_11535 809708f50dfd7d4de0c54fd921389633 176 Gene3D G3DSA:3.30.230.60 4 174 1.9E-52 T 01-11-2018 IPR037075 Formaldehyde-activating enzyme superfamily GO:0016051|GO:0016840 KEGG: 00030+4.1.2.43|KEGG: 00680+4.2.1.147+4.1.2.43|MetaCyc: PWY-1723|MetaCyc: PWY-1861|MetaCyc: PWY-7796 CDA09_18550 1a8508bf3d53f1f8ca9211a77215a375 67 TIGRFAM TIGR01683 thiS: thiamine biosynthesis protein ThiS 4 67 2.0E-19 T 01-11-2018 IPR010035 ThiS, thiamine-biosynthesis CDA09_18550 1a8508bf3d53f1f8ca9211a77215a375 67 Gene3D G3DSA:3.10.20.30 3 67 4.8E-19 T 01-11-2018 IPR012675 Beta-grasp domain superfamily CDA09_18550 1a8508bf3d53f1f8ca9211a77215a375 67 Pfam PF02597 ThiS family 4 67 9.4E-13 T 01-11-2018 IPR003749 Sulfur carrier ThiS/MoaD-like Reactome: R-HSA-947581 CDA09_18550 1a8508bf3d53f1f8ca9211a77215a375 67 SUPERFAMILY SSF54285 4 66 6.38E-17 T 01-11-2018 IPR016155 Molybdopterin synthase/thiamin biosynthesis sulphur carrier, beta-grasp CDA09_21990 270cf37603c463c180d577ba6dfc0cc8 389 SUPERFAMILY SSF53901 249 370 2.05E-23 T 01-11-2018 IPR016039 Thiolase-like GO:0003824 CDA09_21990 270cf37603c463c180d577ba6dfc0cc8 389 Pfam PF02803 Thiolase, C-terminal domain 262 351 1.5E-9 T 01-11-2018 IPR020617 Thiolase, C-terminal GO:0016747 CDA09_21990 270cf37603c463c180d577ba6dfc0cc8 389 Gene3D G3DSA:3.40.47.10 4 382 2.6E-103 T 01-11-2018 IPR016039 Thiolase-like GO:0003824 CDA09_21990 270cf37603c463c180d577ba6dfc0cc8 389 SUPERFAMILY SSF53901 7 227 7.61E-37 T 01-11-2018 IPR016039 Thiolase-like GO:0003824 CDA09_21990 270cf37603c463c180d577ba6dfc0cc8 389 Pfam PF00108 Thiolase, N-terminal domain 7 220 1.6E-16 T 01-11-2018 IPR020616 Thiolase, N-terminal GO:0016747 CDA09_21990 270cf37603c463c180d577ba6dfc0cc8 389 PIRSF PIRSF000429 1 377 3.8E-53 T 01-11-2018 IPR002155 Thiolase GO:0016747 CDA09_03925 7eeeaf357fa43c804144c327e3cee136 472 Pfam PF00158 Sigma-54 interaction domain 138 304 2.1E-70 T 01-11-2018 IPR002078 RNA polymerase sigma factor 54 interaction domain GO:0005524|GO:0006355|GO:0008134 CDA09_03925 7eeeaf357fa43c804144c327e3cee136 472 Pfam PF02954 Bacterial regulatory protein, Fis family 420 459 5.1E-12 T 01-11-2018 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 CDA09_03925 7eeeaf357fa43c804144c327e3cee136 472 Gene3D G3DSA:3.40.50.2300 1 123 9.7E-34 T 01-11-2018 CDA09_03925 7eeeaf357fa43c804144c327e3cee136 472 SMART SM00382 158 301 2.0E-13 T 01-11-2018 IPR003593 AAA+ ATPase domain CDA09_03925 7eeeaf357fa43c804144c327e3cee136 472 TIGRFAM TIGR01818 ntrC: nitrogen regulation protein NR(I) 4 459 6.3E-210 T 01-11-2018 IPR010114 DNA-binding transcriptional regulator NtrC GO:0000156|GO:0000160|GO:0003677|GO:0005524|GO:0006808 CDA09_03925 7eeeaf357fa43c804144c327e3cee136 472 SUPERFAMILY SSF52172 2 183 6.26E-40 T 01-11-2018 IPR011006 CheY-like superfamily CDA09_03925 7eeeaf357fa43c804144c327e3cee136 472 Gene3D G3DSA:1.10.10.60 382 462 1.3E-18 T 01-11-2018 CDA09_03925 7eeeaf357fa43c804144c327e3cee136 472 SMART SM00448 2 115 2.2E-28 T 01-11-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 CDA09_03925 7eeeaf357fa43c804144c327e3cee136 472 Gene3D G3DSA:1.10.8.60 310 381 5.3E-20 T 01-11-2018 CDA09_03925 7eeeaf357fa43c804144c327e3cee136 472 ProSitePatterns PS00676 Sigma-54 interaction domain ATP-binding region B signature. 224 239 - T 01-11-2018 IPR025943 Sigma-54 interaction domain, ATP-binding site 2 CDA09_03925 7eeeaf357fa43c804144c327e3cee136 472 Pfam PF00072 Response regulator receiver domain 4 115 2.7E-22 T 01-11-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 CDA09_03925 7eeeaf357fa43c804144c327e3cee136 472 PRINTS PR01590 FIS bacterial regulatory protein HTH signature 425 442 1.6E-9 T 01-11-2018 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 CDA09_03925 7eeeaf357fa43c804144c327e3cee136 472 PRINTS PR01590 FIS bacterial regulatory protein HTH signature 442 462 1.6E-9 T 01-11-2018 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 CDA09_03925 7eeeaf357fa43c804144c327e3cee136 472 Gene3D G3DSA:3.40.50.300 124 309 1.8E-65 T 01-11-2018 CDA09_03925 7eeeaf357fa43c804144c327e3cee136 472 SUPERFAMILY SSF46689 378 462 5.02E-18 T 01-11-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 CDA09_03925 7eeeaf357fa43c804144c327e3cee136 472 SUPERFAMILY SSF52540 137 380 2.39E-74 T 01-11-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CDA09_03925 7eeeaf357fa43c804144c327e3cee136 472 ProSitePatterns PS00675 Sigma-54 interaction domain ATP-binding region A signature. 162 175 - T 01-11-2018 IPR025662 Sigma-54 interaction domain, ATP-binding site 1 CDA09_03925 7eeeaf357fa43c804144c327e3cee136 472 ProSitePatterns PS00688 Sigma-54 interaction domain C-terminal part signature. 351 360 - T 01-11-2018 IPR025944 Sigma-54 interaction domain, conserved site CDA09_09235 c291863de6892fc75a571972df7b815c 252 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 44 58 3.5E-10 T 01-11-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 CDA09_09235 c291863de6892fc75a571972df7b815c 252 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 58 74 3.5E-10 T 01-11-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 CDA09_09235 c291863de6892fc75a571972df7b815c 252 SUPERFAMILY SSF46785 15 90 1.4E-20 T 01-11-2018 IPR036390 Winged helix DNA-binding domain superfamily CDA09_09235 c291863de6892fc75a571972df7b815c 252 SMART SM00895 111 233 1.9E-21 T 01-11-2018 IPR011711 GntR, C-terminal CDA09_09235 c291863de6892fc75a571972df7b815c 252 Pfam PF00392 Bacterial regulatory proteins, gntR family 23 80 1.1E-20 T 01-11-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 CDA09_09235 c291863de6892fc75a571972df7b815c 252 SMART SM00345 25 86 1.4E-22 T 01-11-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 CDA09_09235 c291863de6892fc75a571972df7b815c 252 Pfam PF07729 FCD domain 111 233 6.6E-23 T 01-11-2018 IPR011711 GntR, C-terminal CDA09_09235 c291863de6892fc75a571972df7b815c 252 Gene3D G3DSA:1.10.10.10 10 86 7.0E-23 T 01-11-2018 IPR036388 Winged helix-like DNA-binding domain superfamily CDA09_09235 c291863de6892fc75a571972df7b815c 252 SUPERFAMILY SSF48008 110 240 3.14E-24 T 01-11-2018 IPR008920 Transcription regulator FadR/GntR, C-terminal CDA09_09235 c291863de6892fc75a571972df7b815c 252 Gene3D G3DSA:1.20.120.530 109 247 1.9E-24 T 01-11-2018 IPR008920 Transcription regulator FadR/GntR, C-terminal CDA09_19675 4a8b2a44a210c4a97767b6a02c9f3ece 452 Pfam PF02310 B12 binding domain 37 147 4.3E-27 T 01-11-2018 IPR006158 Cobalamin (vitamin B12)-binding domain GO:0031419|GO:0046872 Reactome: R-HSA-196741 CDA09_19675 4a8b2a44a210c4a97767b6a02c9f3ece 452 SUPERFAMILY SSF52242 42 134 6.28E-9 T 01-11-2018 IPR036724 Cobalamin-binding domain superfamily GO:0031419|GO:0046872 Reactome: R-HSA-196741 CDA09_19675 4a8b2a44a210c4a97767b6a02c9f3ece 452 SUPERFAMILY SSF102114 179 408 9.16E-43 T 01-11-2018 CDA09_19675 4a8b2a44a210c4a97767b6a02c9f3ece 452 Gene3D G3DSA:3.40.50.280 44 159 1.3E-9 T 01-11-2018 CDA09_19675 4a8b2a44a210c4a97767b6a02c9f3ece 452 Gene3D G3DSA:3.80.30.20 213 420 2.9E-30 T 01-11-2018 IPR023404 Radical SAM, alpha/beta horseshoe CDA09_19675 4a8b2a44a210c4a97767b6a02c9f3ece 452 Pfam PF04055 Radical SAM superfamily 216 376 2.4E-20 T 01-11-2018 IPR007197 Radical SAM GO:0003824|GO:0051536 CDA09_19675 4a8b2a44a210c4a97767b6a02c9f3ece 452 SMART SM00729 211 422 4.8E-38 T 01-11-2018 IPR006638 Elp3/MiaB/NifB GO:0003824|GO:0051536 CDA09_14945 f97d42ff678c9b60fd6f4a176f2f2bb2 622 ProSitePatterns PS00329 Heat shock hsp70 proteins family signature 2. 204 217 - T 01-11-2018 IPR018181 Heat shock protein 70, conserved site Reactome: R-HSA-3371453 CDA09_14945 f97d42ff678c9b60fd6f4a176f2f2bb2 622 Gene3D G3DSA:2.60.34.10 382 523 1.2E-45 T 01-11-2018 IPR029047 Heat shock protein 70kD, peptide-binding domain superfamily Reactome: R-HSA-3371453 CDA09_14945 f97d42ff678c9b60fd6f4a176f2f2bb2 622 SUPERFAMILY SSF53067 19 195 1.3E-50 T 01-11-2018 CDA09_14945 f97d42ff678c9b60fd6f4a176f2f2bb2 622 SUPERFAMILY SSF53067 199 380 5.76E-49 T 01-11-2018 CDA09_14945 f97d42ff678c9b60fd6f4a176f2f2bb2 622 TIGRFAM TIGR01991 HscA: Fe-S protein assembly chaperone HscA 21 619 1.4E-272 T 01-11-2018 IPR010236 ISC system FeS cluster assembly, HscA chaperone GO:0005524|GO:0006457|GO:0016226|GO:0016887|GO:0051082 CDA09_14945 f97d42ff678c9b60fd6f4a176f2f2bb2 622 Gene3D G3DSA:1.20.1270.10 524 619 2.7E-28 T 01-11-2018 IPR029048 Heat shock protein 70kD, C-terminal domain superfamily Reactome: R-HSA-3371453 CDA09_14945 f97d42ff678c9b60fd6f4a176f2f2bb2 622 Pfam PF00012 Hsp70 protein 21 603 3.3E-177 T 01-11-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 CDA09_14945 f97d42ff678c9b60fd6f4a176f2f2bb2 622 Gene3D G3DSA:3.90.640.10 237 314 1.0E-111 T 01-11-2018 CDA09_14945 f97d42ff678c9b60fd6f4a176f2f2bb2 622 Gene3D G3DSA:3.30.420.40 22 377 1.0E-111 T 01-11-2018 CDA09_14945 f97d42ff678c9b60fd6f4a176f2f2bb2 622 ProSitePatterns PS01036 Heat shock hsp70 proteins family signature 3. 335 349 - T 01-11-2018 IPR018181 Heat shock protein 70, conserved site Reactome: R-HSA-3371453 CDA09_14945 f97d42ff678c9b60fd6f4a176f2f2bb2 622 SUPERFAMILY SSF100920 387 540 4.32E-46 T 01-11-2018 IPR029047 Heat shock protein 70kD, peptide-binding domain superfamily Reactome: R-HSA-3371453 CDA09_14945 f97d42ff678c9b60fd6f4a176f2f2bb2 622 PRINTS PR00301 70kDa heat shock protein signature 363 383 8.4E-56 T 01-11-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 CDA09_14945 f97d42ff678c9b60fd6f4a176f2f2bb2 622 PRINTS PR00301 70kDa heat shock protein signature 48 60 8.4E-56 T 01-11-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 CDA09_14945 f97d42ff678c9b60fd6f4a176f2f2bb2 622 PRINTS PR00301 70kDa heat shock protein signature 332 348 8.4E-56 T 01-11-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 CDA09_14945 f97d42ff678c9b60fd6f4a176f2f2bb2 622 PRINTS PR00301 70kDa heat shock protein signature 470 486 8.4E-56 T 01-11-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 CDA09_14945 f97d42ff678c9b60fd6f4a176f2f2bb2 622 PRINTS PR00301 70kDa heat shock protein signature 20 33 8.4E-56 T 01-11-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 CDA09_14945 f97d42ff678c9b60fd6f4a176f2f2bb2 622 PRINTS PR00301 70kDa heat shock protein signature 389 408 8.4E-56 T 01-11-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 CDA09_14945 f97d42ff678c9b60fd6f4a176f2f2bb2 622 PRINTS PR00301 70kDa heat shock protein signature 151 171 8.4E-56 T 01-11-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 CDA09_14945 f97d42ff678c9b60fd6f4a176f2f2bb2 622 PRINTS PR00301 70kDa heat shock protein signature 210 220 8.4E-56 T 01-11-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 CDA09_14945 f97d42ff678c9b60fd6f4a176f2f2bb2 622 SUPERFAMILY SSF100934 508 619 1.29E-35 T 01-11-2018 IPR029048 Heat shock protein 70kD, C-terminal domain superfamily Reactome: R-HSA-3371453 CDA09_14945 f97d42ff678c9b60fd6f4a176f2f2bb2 622 ProSitePatterns PS00297 Heat shock hsp70 proteins family signature 1. 24 31 - T 01-11-2018 IPR018181 Heat shock protein 70, conserved site Reactome: R-HSA-3371453 CDA09_14945 f97d42ff678c9b60fd6f4a176f2f2bb2 622 Gene3D G3DSA:3.30.420.40 193 364 1.0E-111 T 01-11-2018 CDA09_14945 f97d42ff678c9b60fd6f4a176f2f2bb2 622 Hamap MF_00679 Chaperone protein HscA [hscA]. 1 620 43.188 T 01-11-2018 IPR010236 ISC system FeS cluster assembly, HscA chaperone GO:0005524|GO:0006457|GO:0016226|GO:0016887|GO:0051082 CDA09_22790 bea14daa8d2b2ea19be237f234836da7 541 Gene3D G3DSA:3.40.50.300 4 279 1.1E-59 T 01-11-2018 CDA09_22790 bea14daa8d2b2ea19be237f234836da7 541 Pfam PF00005 ABC transporter 18 184 8.5E-20 T 01-11-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 CDA09_22790 bea14daa8d2b2ea19be237f234836da7 541 Gene3D G3DSA:3.40.50.300 285 539 6.9E-53 T 01-11-2018 CDA09_22790 bea14daa8d2b2ea19be237f234836da7 541 SUPERFAMILY SSF52540 314 534 8.26E-43 T 01-11-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CDA09_22790 bea14daa8d2b2ea19be237f234836da7 541 Pfam PF00005 ABC transporter 340 477 6.8E-20 T 01-11-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 CDA09_22790 bea14daa8d2b2ea19be237f234836da7 541 SUPERFAMILY SSF52540 6 238 6.07E-46 T 01-11-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CDA09_22790 bea14daa8d2b2ea19be237f234836da7 541 Pfam PF12848 ABC transporter 224 305 8.5E-22 T 01-11-2018 IPR032781 ABC-transporter extension domain CDA09_22790 bea14daa8d2b2ea19be237f234836da7 541 SMART SM00382 26 259 3.7E-6 T 01-11-2018 IPR003593 AAA+ ATPase domain CDA09_22790 bea14daa8d2b2ea19be237f234836da7 541 SMART SM00382 348 522 2.6E-14 T 01-11-2018 IPR003593 AAA+ ATPase domain CDA09_00665 d34aaa4e565fc715e8ef4be143d47e4e 610 SUPERFAMILY SSF55874 429 592 4.71E-34 T 01-11-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily CDA09_00665 d34aaa4e565fc715e8ef4be143d47e4e 610 SUPERFAMILY SSF53850 35 283 2.78E-15 T 01-11-2018 CDA09_00665 d34aaa4e565fc715e8ef4be143d47e4e 610 Gene3D G3DSA:1.10.287.130 377 435 1.4E-15 T 01-11-2018 CDA09_00665 d34aaa4e565fc715e8ef4be143d47e4e 610 Pfam PF00512 His Kinase A (phospho-acceptor) domain 372 440 7.0E-8 T 01-11-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 CDA09_00665 d34aaa4e565fc715e8ef4be143d47e4e 610 SUPERFAMILY SSF47384 359 438 5.49E-9 T 01-11-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 CDA09_00665 d34aaa4e565fc715e8ef4be143d47e4e 610 Gene3D G3DSA:3.30.565.10 436 592 3.4E-32 T 01-11-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily CDA09_00665 d34aaa4e565fc715e8ef4be143d47e4e 610 SMART SM00387 483 594 4.9E-31 T 01-11-2018 IPR003594 Histidine kinase/HSP90-like ATPase CDA09_00665 d34aaa4e565fc715e8ef4be143d47e4e 610 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 484 593 2.2E-16 T 01-11-2018 IPR003594 Histidine kinase/HSP90-like ATPase CDA09_00665 d34aaa4e565fc715e8ef4be143d47e4e 610 Pfam PF12974 ABC transporter, phosphonate, periplasmic substrate-binding protein 37 275 1.4E-32 T 01-11-2018 CDA09_00665 d34aaa4e565fc715e8ef4be143d47e4e 610 PRINTS PR00344 Bacterial sensor protein C-terminal signature 524 538 1.1E-14 T 01-11-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 CDA09_00665 d34aaa4e565fc715e8ef4be143d47e4e 610 PRINTS PR00344 Bacterial sensor protein C-terminal signature 578 591 1.1E-14 T 01-11-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 CDA09_00665 d34aaa4e565fc715e8ef4be143d47e4e 610 PRINTS PR00344 Bacterial sensor protein C-terminal signature 553 571 1.1E-14 T 01-11-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 CDA09_00665 d34aaa4e565fc715e8ef4be143d47e4e 610 PRINTS PR00344 Bacterial sensor protein C-terminal signature 542 552 1.1E-14 T 01-11-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 CDA09_00665 d34aaa4e565fc715e8ef4be143d47e4e 610 SMART SM00388 371 441 1.7E-7 T 01-11-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 CDA09_00665 d34aaa4e565fc715e8ef4be143d47e4e 610 Gene3D G3DSA:3.40.190.10 38 271 6.1E-14 T 01-11-2018 CDA09_00665 d34aaa4e565fc715e8ef4be143d47e4e 610 Gene3D G3DSA:3.40.190.10 123 240 6.1E-14 T 01-11-2018 CDA09_04865 808364a8249a5fc8faf58839042c11a0 145 SUPERFAMILY SSF47413 19 93 4.79E-12 T 01-11-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 CDA09_04865 808364a8249a5fc8faf58839042c11a0 145 SMART SM00530 23 87 5.3E-7 T 01-11-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 CDA09_04865 808364a8249a5fc8faf58839042c11a0 145 Gene3D G3DSA:1.10.260.40 17 92 1.7E-12 T 01-11-2018 CDA09_04865 808364a8249a5fc8faf58839042c11a0 145 Pfam PF01381 Helix-turn-helix 24 87 1.7E-8 T 01-11-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 CDA09_08795 d0d4c9c944135be1998f1218d8ace4f4 525 Gene3D G3DSA:3.40.50.12780 12 418 2.4E-114 T 01-11-2018 CDA09_08795 d0d4c9c944135be1998f1218d8ace4f4 525 Pfam PF13193 AMP-binding enzyme C-terminal domain 434 509 8.7E-25 T 01-11-2018 IPR025110 AMP-binding enzyme, C-terminal domain CDA09_08795 d0d4c9c944135be1998f1218d8ace4f4 525 SUPERFAMILY SSF56801 16 521 3.27E-156 T 01-11-2018 CDA09_08795 d0d4c9c944135be1998f1218d8ace4f4 525 Gene3D G3DSA:3.30.300.310 421 525 1.1E-35 T 01-11-2018 CDA09_08795 d0d4c9c944135be1998f1218d8ace4f4 525 Pfam PF00501 AMP-binding enzyme 25 425 1.0E-103 T 01-11-2018 IPR000873 AMP-dependent synthetase/ligase GO:0003824 CDA09_20810 d3a9bbf4e03e70505d007fd37a0b4677 309 Pfam PF02653 Branched-chain amino acid transport system / permease component 27 286 8.2E-36 T 01-11-2018 IPR001851 ABC transporter, permease GO:0016020|GO:0022857|GO:0055085 CDA09_11180 2646d426831995ac6c91615eed3e1160 679 SUPERFAMILY SSF53067 1 112 5.27E-8 T 01-11-2018 CDA09_11180 2646d426831995ac6c91615eed3e1160 679 Pfam PF01968 Hydantoinase/oxoprolinase 185 327 1.8E-31 T 01-11-2018 IPR002821 Hydantoinase A/oxoprolinase GO:0016787 Reactome: R-HSA-174403|Reactome: R-HSA-5578998 CDA09_11180 2646d426831995ac6c91615eed3e1160 679 SUPERFAMILY SSF53067 4 322 5.38E-12 T 01-11-2018 CDA09_11180 2646d426831995ac6c91615eed3e1160 679 Gene3D G3DSA:3.30.420.40 1 127 6.9E-5 T 01-11-2018 CDA09_11180 2646d426831995ac6c91615eed3e1160 679 Pfam PF05378 Hydantoinase/oxoprolinase N-terminal region 5 165 3.6E-33 T 01-11-2018 IPR008040 Hydantoinaseoxoprolinase, N-terminal Reactome: R-HSA-174403|Reactome: R-HSA-5578998 CDA09_03370 8503d2df1c5191271afd2dcb983f6ac4 496 PIRSF PIRSF000538 1 496 5.8E-177 T 01-11-2018 IPR000577 Carbohydrate kinase, FGGY GO:0005975|GO:0016773 KEGG: 00561+2.7.1.30|MetaCyc: PWY-4261 CDA09_03370 8503d2df1c5191271afd2dcb983f6ac4 496 SUPERFAMILY SSF53067 4 252 5.18E-90 T 01-11-2018 CDA09_03370 8503d2df1c5191271afd2dcb983f6ac4 496 Pfam PF00370 FGGY family of carbohydrate kinases, N-terminal domain 5 249 4.7E-74 T 01-11-2018 IPR018484 Carbohydrate kinase, FGGY, N-terminal GO:0005975|GO:0016773 CDA09_03370 8503d2df1c5191271afd2dcb983f6ac4 496 ProSitePatterns PS00933 FGGY family of carbohydrate kinases signature 1. 133 145 - T 01-11-2018 IPR018483 Carbohydrate kinase, FGGY, conserved site GO:0005975|GO:0016773 KEGG: 00561+2.7.1.30|MetaCyc: PWY-4261 CDA09_03370 8503d2df1c5191271afd2dcb983f6ac4 496 Hamap MF_00186 Glycerol kinase [glpK]. 1 494 55.702 T 01-11-2018 IPR005999 Glycerol kinase GO:0004370|GO:0006072 KEGG: 00561+2.7.1.30|MetaCyc: PWY-4261|Reactome: R-HSA-75109 CDA09_03370 8503d2df1c5191271afd2dcb983f6ac4 496 SUPERFAMILY SSF53067 252 493 6.85E-83 T 01-11-2018 CDA09_03370 8503d2df1c5191271afd2dcb983f6ac4 496 Gene3D G3DSA:3.30.420.40 1 250 5.0E-102 T 01-11-2018 CDA09_03370 8503d2df1c5191271afd2dcb983f6ac4 496 TIGRFAM TIGR01311 glycerol_kin: glycerol kinase 3 493 5.2E-210 T 01-11-2018 IPR005999 Glycerol kinase GO:0004370|GO:0006072 KEGG: 00561+2.7.1.30|MetaCyc: PWY-4261|Reactome: R-HSA-75109 CDA09_03370 8503d2df1c5191271afd2dcb983f6ac4 496 Gene3D G3DSA:3.30.420.40 251 496 1.9E-89 T 01-11-2018 CDA09_03370 8503d2df1c5191271afd2dcb983f6ac4 496 Pfam PF02782 FGGY family of carbohydrate kinases, C-terminal domain 258 446 1.4E-62 T 01-11-2018 IPR018485 Carbohydrate kinase, FGGY, C-terminal GO:0005975|GO:0016773 CDA09_03370 8503d2df1c5191271afd2dcb983f6ac4 496 ProSitePatterns PS00445 FGGY family of carbohydrate kinases signature 2. 359 379 - T 01-11-2018 IPR018483 Carbohydrate kinase, FGGY, conserved site GO:0005975|GO:0016773 KEGG: 00561+2.7.1.30|MetaCyc: PWY-4261 CDA09_00235 1235c9c0c007970f3c873692f05de366 314 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 29 39 1.9E-8 T 01-11-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 CDA09_00235 1235c9c0c007970f3c873692f05de366 314 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 39 50 1.9E-8 T 01-11-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 CDA09_00235 1235c9c0c007970f3c873692f05de366 314 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 18 29 1.9E-8 T 01-11-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 CDA09_00235 1235c9c0c007970f3c873692f05de366 314 Pfam PF03466 LysR substrate binding domain 87 294 5.1E-47 T 01-11-2018 IPR005119 LysR, substrate-binding CDA09_00235 1235c9c0c007970f3c873692f05de366 314 Gene3D G3DSA:1.10.10.10 1 85 1.3E-28 T 01-11-2018 IPR036388 Winged helix-like DNA-binding domain superfamily CDA09_00235 1235c9c0c007970f3c873692f05de366 314 Gene3D G3DSA:3.40.190.10 92 290 2.7E-76 T 01-11-2018 CDA09_00235 1235c9c0c007970f3c873692f05de366 314 SUPERFAMILY SSF46785 1 111 1.36E-19 T 01-11-2018 IPR036390 Winged helix DNA-binding domain superfamily CDA09_00235 1235c9c0c007970f3c873692f05de366 314 Gene3D G3DSA:3.40.190.10 161 267 2.7E-76 T 01-11-2018 CDA09_00235 1235c9c0c007970f3c873692f05de366 314 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 3 62 1.1E-17 T 01-11-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 CDA09_00235 1235c9c0c007970f3c873692f05de366 314 SUPERFAMILY SSF53850 88 295 3.94E-40 T 01-11-2018 CDA09_19585 eeea6c8446238151f22164b7a5310976 177 Gene3D G3DSA:2.30.30.30 118 176 7.7E-24 T 01-11-2018 IPR014722 Ribosomal protein L2, domain 2 CDA09_19585 eeea6c8446238151f22164b7a5310976 177 SUPERFAMILY SSF82679 3 113 4.58E-41 T 01-11-2018 IPR036735 NusG, N-terminal domain superfamily GO:0006355 Reactome: R-HSA-112382|Reactome: R-HSA-113418|Reactome: R-HSA-167152|Reactome: R-HSA-167158|Reactome: R-HSA-167160|Reactome: R-HSA-167200|Reactome: R-HSA-167238|Reactome: R-HSA-167242|Reactome: R-HSA-167243|Reactome: R-HSA-167246|Reactome: R-HSA-167287|Reactome: R-HSA-167290|Reactome: R-HSA-674695|Reactome: R-HSA-6796648|Reactome: R-HSA-6807505|Reactome: R-HSA-72086|Reactome: R-HSA-75955|Reactome: R-HSA-77075 CDA09_19585 eeea6c8446238151f22164b7a5310976 177 ProSitePatterns PS01014 Transcription termination factor nusG signature. 160 169 - T 01-11-2018 IPR015869 Transcription antitermination protein, NusG, bacteria, conserved site CDA09_19585 eeea6c8446238151f22164b7a5310976 177 Gene3D G3DSA:3.30.70.940 1 117 1.3E-48 T 01-11-2018 IPR036735 NusG, N-terminal domain superfamily GO:0006355 Reactome: R-HSA-112382|Reactome: R-HSA-113418|Reactome: R-HSA-167152|Reactome: R-HSA-167158|Reactome: R-HSA-167160|Reactome: R-HSA-167200|Reactome: R-HSA-167238|Reactome: R-HSA-167242|Reactome: R-HSA-167243|Reactome: R-HSA-167246|Reactome: R-HSA-167287|Reactome: R-HSA-167290|Reactome: R-HSA-674695|Reactome: R-HSA-6796648|Reactome: R-HSA-6807505|Reactome: R-HSA-72086|Reactome: R-HSA-75955|Reactome: R-HSA-77075 CDA09_19585 eeea6c8446238151f22164b7a5310976 177 PRINTS PR00338 Transcription termination factor NUSG signature 153 169 5.2E-20 T 01-11-2018 IPR001062 Transcription antitermination protein, NusG GO:0032784 CDA09_19585 eeea6c8446238151f22164b7a5310976 177 PRINTS PR00338 Transcription termination factor NUSG signature 135 150 5.2E-20 T 01-11-2018 IPR001062 Transcription antitermination protein, NusG GO:0032784 CDA09_19585 eeea6c8446238151f22164b7a5310976 177 PRINTS PR00338 Transcription termination factor NUSG signature 57 69 5.2E-20 T 01-11-2018 IPR001062 Transcription antitermination protein, NusG GO:0032784 CDA09_19585 eeea6c8446238151f22164b7a5310976 177 Hamap MF_00948 Transcription termination/antitermination protein NusG [nusG]. 2 177 25.32 T 01-11-2018 IPR001062 Transcription antitermination protein, NusG GO:0032784 CDA09_19585 eeea6c8446238151f22164b7a5310976 177 SMART SM00738 2 111 2.6E-51 T 01-11-2018 IPR006645 NusG, N-terminal GO:0006355 Reactome: R-HSA-112382|Reactome: R-HSA-113418|Reactome: R-HSA-167152|Reactome: R-HSA-167158|Reactome: R-HSA-167160|Reactome: R-HSA-167200|Reactome: R-HSA-167238|Reactome: R-HSA-167242|Reactome: R-HSA-167243|Reactome: R-HSA-167246|Reactome: R-HSA-167287|Reactome: R-HSA-167290|Reactome: R-HSA-674695|Reactome: R-HSA-6796648|Reactome: R-HSA-6807505|Reactome: R-HSA-72086|Reactome: R-HSA-75955|Reactome: R-HSA-77075 CDA09_19585 eeea6c8446238151f22164b7a5310976 177 SUPERFAMILY SSF50104 121 176 8.42E-19 T 01-11-2018 IPR008991 Translation protein SH3-like domain superfamily CDA09_19585 eeea6c8446238151f22164b7a5310976 177 TIGRFAM TIGR00922 nusG: transcription termination/antitermination factor NusG 5 176 1.3E-69 T 01-11-2018 IPR001062 Transcription antitermination protein, NusG GO:0032784 CDA09_19585 eeea6c8446238151f22164b7a5310976 177 Pfam PF02357 Transcription termination factor nusG 3 108 1.9E-29 T 01-11-2018 IPR006645 NusG, N-terminal GO:0006355 Reactome: R-HSA-112382|Reactome: R-HSA-113418|Reactome: R-HSA-167152|Reactome: R-HSA-167158|Reactome: R-HSA-167160|Reactome: R-HSA-167200|Reactome: R-HSA-167238|Reactome: R-HSA-167242|Reactome: R-HSA-167243|Reactome: R-HSA-167246|Reactome: R-HSA-167287|Reactome: R-HSA-167290|Reactome: R-HSA-674695|Reactome: R-HSA-6796648|Reactome: R-HSA-6807505|Reactome: R-HSA-72086|Reactome: R-HSA-75955|Reactome: R-HSA-77075 CDA09_14400 ad5cc5570d830fcaf3e1f510cafab03b 326 SMART SM00849 88 294 1.7E-22 T 01-11-2018 IPR001279 Metallo-beta-lactamase CDA09_14400 ad5cc5570d830fcaf3e1f510cafab03b 326 SUPERFAMILY SSF56281 28 308 1.31E-53 T 01-11-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like CDA09_14400 ad5cc5570d830fcaf3e1f510cafab03b 326 Pfam PF00753 Metallo-beta-lactamase superfamily 87 279 4.7E-23 T 01-11-2018 IPR001279 Metallo-beta-lactamase CDA09_14400 ad5cc5570d830fcaf3e1f510cafab03b 326 Gene3D G3DSA:3.60.15.10 27 322 4.0E-102 T 01-11-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like CDA09_10280 54761922ad80f66f27946bd57e0259e5 309 SUPERFAMILY SSF54593 1 279 4.79E-46 T 01-11-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase CDA09_10280 54761922ad80f66f27946bd57e0259e5 309 TIGRFAM TIGR03211 catechol_2_3: catechol 2,3 dioxygenase 5 308 2.0E-136 T 01-11-2018 IPR017624 Catechol 2,3 dioxygenase GO:0008198|GO:0018577|GO:0019439|GO:0055114 KEGG: 00361+1.13.11.2|KEGG: 00362+1.13.11.2|KEGG: 00622+1.13.11.2|KEGG: 00643+1.13.11.2|MetaCyc: PWY-5419|MetaCyc: PWY-5641 CDA09_10280 54761922ad80f66f27946bd57e0259e5 309 ProSitePatterns PS00082 Extradiol ring-cleavage dioxygenases signature. 246 267 - T 01-11-2018 IPR000486 Extradiol ring-cleavage dioxygenase, class I /II GO:0003824|GO:0006725|GO:0008198|GO:0055114 CDA09_10280 54761922ad80f66f27946bd57e0259e5 309 Gene3D G3DSA:3.10.180.10 151 309 1.1E-40 T 01-11-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase CDA09_10280 54761922ad80f66f27946bd57e0259e5 309 Pfam PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily 10 120 8.4E-5 T 01-11-2018 IPR004360 Glyoxalase/fosfomycin resistance/dioxygenase domain CDA09_10280 54761922ad80f66f27946bd57e0259e5 309 Pfam PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily 151 267 4.1E-17 T 01-11-2018 IPR004360 Glyoxalase/fosfomycin resistance/dioxygenase domain CDA09_10280 54761922ad80f66f27946bd57e0259e5 309 Gene3D G3DSA:3.10.180.10 1 135 1.3E-37 T 01-11-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase CDA09_22970 2fcabf2629ade8e0c4e791a817930546 283 Gene3D G3DSA:3.40.50.300 28 281 2.5E-50 T 01-11-2018 CDA09_22970 2fcabf2629ade8e0c4e791a817930546 283 Pfam PF00005 ABC transporter 58 213 4.6E-28 T 01-11-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 CDA09_22970 2fcabf2629ade8e0c4e791a817930546 283 Pfam PF12399 Branched-chain amino acid ATP-binding cassette transporter 261 282 4.9E-8 T 01-11-2018 IPR032823 Branched-chain amino acid ATP-binding cassette transporter, C-terminal CDA09_22970 2fcabf2629ade8e0c4e791a817930546 283 SUPERFAMILY SSF52540 41 281 2.46E-52 T 01-11-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CDA09_22970 2fcabf2629ade8e0c4e791a817930546 283 TIGRFAM TIGR03411 urea_trans_UrtD: urea ABC transporter, ATP-binding protein UrtD 42 283 1.1E-115 T 01-11-2018 IPR017781 ABC transporter, urea, ATP-binding protein, UrtD CDA09_18165 2194d3d0ee30bb688f4d2e17ee359f5d 409 SMART SM00842 9 195 3.2E-101 T 01-11-2018 IPR003494 SHS2 domain inserted in FtsA GO:0005515|GO:0051301 CDA09_18165 2194d3d0ee30bb688f4d2e17ee359f5d 409 Hamap MF_02033 Cell division protein FtsA [ftsA]. 5 409 31.055 T 01-11-2018 IPR020823 Cell division protein FtsA CDA09_18165 2194d3d0ee30bb688f4d2e17ee359f5d 409 Gene3D G3DSA:3.30.420.40 196 351 1.7E-124 T 01-11-2018 CDA09_18165 2194d3d0ee30bb688f4d2e17ee359f5d 409 Gene3D G3DSA:3.30.1490.110 86 168 1.7E-124 T 01-11-2018 CDA09_18165 2194d3d0ee30bb688f4d2e17ee359f5d 409 TIGRFAM TIGR01174 ftsA: cell division protein FtsA 8 375 9.7E-147 T 01-11-2018 IPR020823 Cell division protein FtsA CDA09_18165 2194d3d0ee30bb688f4d2e17ee359f5d 409 Pfam PF14450 Cell division protein FtsA 10 192 7.1E-8 T 01-11-2018 CDA09_18165 2194d3d0ee30bb688f4d2e17ee359f5d 409 SUPERFAMILY SSF53067 7 196 4.75E-60 T 01-11-2018 CDA09_18165 2194d3d0ee30bb688f4d2e17ee359f5d 409 Gene3D G3DSA:3.30.420.40 12 371 1.7E-124 T 01-11-2018 CDA09_18165 2194d3d0ee30bb688f4d2e17ee359f5d 409 SUPERFAMILY SSF53067 197 376 3.18E-51 T 01-11-2018 CDA09_18165 2194d3d0ee30bb688f4d2e17ee359f5d 409 Pfam PF14450 Cell division protein FtsA 206 373 7.1E-25 T 01-11-2018 CDA09_18165 2194d3d0ee30bb688f4d2e17ee359f5d 409 Pfam PF02491 SHS2 domain inserted in FTSA 84 161 5.7E-31 T 01-11-2018 IPR003494 SHS2 domain inserted in FtsA GO:0005515|GO:0051301 CDA09_18165 2194d3d0ee30bb688f4d2e17ee359f5d 409 Gene3D G3DSA:3.90.640.10 234 299 1.7E-124 T 01-11-2018 CDA09_18165 2194d3d0ee30bb688f4d2e17ee359f5d 409 PIRSF PIRSF003101 1 409 1.9E-153 T 01-11-2018 IPR020823 Cell division protein FtsA CDA09_18385 d8da5c71c3bffc93cad8c967f5d687af 373 Pfam PF13439 Glycosyltransferase Family 4 16 176 1.9E-10 T 01-11-2018 IPR028098 Glycosyltransferase subfamily 4-like, N-terminal domain Reactome: R-HSA-446193|Reactome: R-HSA-4549349 CDA09_18385 d8da5c71c3bffc93cad8c967f5d687af 373 Pfam PF00534 Glycosyl transferases group 1 187 350 7.3E-31 T 01-11-2018 IPR001296 Glycosyl transferase, family 1 CDA09_18385 d8da5c71c3bffc93cad8c967f5d687af 373 Gene3D G3DSA:3.40.50.2000 10 174 1.3E-58 T 01-11-2018 CDA09_18385 d8da5c71c3bffc93cad8c967f5d687af 373 SUPERFAMILY SSF53756 1 371 5.97E-64 T 01-11-2018 CDA09_18385 d8da5c71c3bffc93cad8c967f5d687af 373 Gene3D G3DSA:3.40.50.2000 175 356 1.3E-58 T 01-11-2018 CDA09_07430 50c87f787ee9f075dcda757ff6db3b79 250 Gene3D G3DSA:3.40.50.720 2 248 1.9E-51 T 01-11-2018 CDA09_07430 50c87f787ee9f075dcda757ff6db3b79 250 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 19 241 2.5E-39 T 01-11-2018 CDA09_07430 50c87f787ee9f075dcda757ff6db3b79 250 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 155 174 1.2E-26 T 01-11-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CDA09_07430 50c87f787ee9f075dcda757ff6db3b79 250 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 9 26 1.2E-26 T 01-11-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CDA09_07430 50c87f787ee9f075dcda757ff6db3b79 250 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 83 94 1.2E-26 T 01-11-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CDA09_07430 50c87f787ee9f075dcda757ff6db3b79 250 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 130 146 1.2E-26 T 01-11-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CDA09_07430 50c87f787ee9f075dcda757ff6db3b79 250 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 176 193 1.2E-26 T 01-11-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CDA09_07430 50c87f787ee9f075dcda757ff6db3b79 250 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 206 226 1.2E-26 T 01-11-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CDA09_07430 50c87f787ee9f075dcda757ff6db3b79 250 SUPERFAMILY SSF51735 6 244 2.91E-56 T 01-11-2018 IPR036291 NAD(P)-binding domain superfamily CDA09_07430 50c87f787ee9f075dcda757ff6db3b79 250 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 83 94 7.0E-6 T 01-11-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CDA09_07430 50c87f787ee9f075dcda757ff6db3b79 250 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 136 144 7.0E-6 T 01-11-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CDA09_07430 50c87f787ee9f075dcda757ff6db3b79 250 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 155 174 7.0E-6 T 01-11-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CDA09_21505 d9e974ad8fecf1d28e1d2ceb59f34786 136 Gene3D G3DSA:1.10.10.10 15 128 5.1E-41 T 01-11-2018 IPR036388 Winged helix-like DNA-binding domain superfamily CDA09_21505 d9e974ad8fecf1d28e1d2ceb59f34786 136 SUPERFAMILY SSF46785 16 126 4.41E-33 T 01-11-2018 IPR036390 Winged helix DNA-binding domain superfamily CDA09_21505 d9e974ad8fecf1d28e1d2ceb59f34786 136 Pfam PF01638 HxlR-like helix-turn-helix 30 116 4.8E-28 T 01-11-2018 IPR002577 Helix-turn-helix, HxlR type CDA09_16360 610f4e8d0eeff813973f3e019df3794b 375 Pfam PF01556 DnaJ C terminal domain 121 333 7.7E-44 T 01-11-2018 IPR002939 Chaperone DnaJ, C-terminal CDA09_16360 610f4e8d0eeff813973f3e019df3794b 375 SUPERFAMILY SSF57938 134 211 1.26E-22 T 01-11-2018 IPR036410 Heat shock protein DnaJ, cysteine-rich domain superfamily CDA09_16360 610f4e8d0eeff813973f3e019df3794b 375 Gene3D G3DSA:1.10.287.110 2 114 2.7E-38 T 01-11-2018 IPR036869 Chaperone J-domain superfamily CDA09_16360 610f4e8d0eeff813973f3e019df3794b 375 Pfam PF00684 DnaJ central domain 147 207 5.5E-15 T 01-11-2018 IPR001305 Heat shock protein DnaJ, cysteine-rich domain GO:0031072|GO:0051082 CDA09_16360 610f4e8d0eeff813973f3e019df3794b 375 Gene3D G3DSA:2.10.230.10 145 211 1.2E-23 T 01-11-2018 CDA09_16360 610f4e8d0eeff813973f3e019df3794b 375 Gene3D G3DSA:2.60.260.20 257 363 2.7E-28 T 01-11-2018 CDA09_16360 610f4e8d0eeff813973f3e019df3794b 375 ProSitePatterns PS00636 Nt-dnaJ domain signature. 48 67 - T 01-11-2018 IPR018253 DnaJ domain, conserved site CDA09_16360 610f4e8d0eeff813973f3e019df3794b 375 Pfam PF00226 DnaJ domain 6 68 8.1E-29 T 01-11-2018 IPR001623 DnaJ domain CDA09_16360 610f4e8d0eeff813973f3e019df3794b 375 SUPERFAMILY SSF46565 2 109 5.1E-37 T 01-11-2018 IPR036869 Chaperone J-domain superfamily CDA09_16360 610f4e8d0eeff813973f3e019df3794b 375 Hamap MF_01152 Chaperone protein DnaJ [dnaJ]. 3 372 42.601 T 01-11-2018 IPR012724 Chaperone DnaJ GO:0005524|GO:0006457|GO:0009408|GO:0051082 CDA09_16360 610f4e8d0eeff813973f3e019df3794b 375 PRINTS PR00625 DnaJ domain signature 26 41 3.6E-33 T 01-11-2018 IPR001623 DnaJ domain CDA09_16360 610f4e8d0eeff813973f3e019df3794b 375 PRINTS PR00625 DnaJ domain signature 8 26 3.6E-33 T 01-11-2018 IPR001623 DnaJ domain CDA09_16360 610f4e8d0eeff813973f3e019df3794b 375 PRINTS PR00625 DnaJ domain signature 63 82 3.6E-33 T 01-11-2018 IPR001623 DnaJ domain CDA09_16360 610f4e8d0eeff813973f3e019df3794b 375 PRINTS PR00625 DnaJ domain signature 43 63 3.6E-33 T 01-11-2018 IPR001623 DnaJ domain CDA09_16360 610f4e8d0eeff813973f3e019df3794b 375 SUPERFAMILY SSF49493 115 256 1.28E-19 T 01-11-2018 IPR008971 HSP40/DnaJ peptide-binding GO:0006457|GO:0051082 CDA09_16360 610f4e8d0eeff813973f3e019df3794b 375 SMART SM00271 5 63 4.8E-33 T 01-11-2018 IPR001623 DnaJ domain CDA09_16360 610f4e8d0eeff813973f3e019df3794b 375 SUPERFAMILY SSF49493 258 344 4.32E-22 T 01-11-2018 IPR008971 HSP40/DnaJ peptide-binding GO:0006457|GO:0051082 CDA09_16360 610f4e8d0eeff813973f3e019df3794b 375 TIGRFAM TIGR02349 DnaJ_bact: chaperone protein DnaJ 6 349 7.3E-140 T 01-11-2018 IPR012724 Chaperone DnaJ GO:0005524|GO:0006457|GO:0009408|GO:0051082 CDA09_14415 b0eea95fd9d795df3f75e90c3933c7f9 357 Pfam PF07143 CrtC N-terminal lipocalin domain 49 219 2.1E-50 T 01-11-2018 IPR010791 AttH domain CDA09_14415 b0eea95fd9d795df3f75e90c3933c7f9 357 Gene3D G3DSA:2.40.370.10 224 357 8.1E-48 T 01-11-2018 IPR023374 AttH-like domain superfamily CDA09_14415 b0eea95fd9d795df3f75e90c3933c7f9 357 Gene3D G3DSA:2.40.370.10 37 222 1.9E-65 T 01-11-2018 IPR023374 AttH-like domain superfamily CDA09_14415 b0eea95fd9d795df3f75e90c3933c7f9 357 Pfam PF17186 Lipocalin-like domain 224 351 2.5E-41 T 01-11-2018 CDA09_14415 b0eea95fd9d795df3f75e90c3933c7f9 357 SUPERFAMILY SSF159245 26 351 5.49E-106 T 01-11-2018 CDA09_19550 62e414091903df1a40c11fe46eac29b7 125 TIGRFAM TIGR00981 rpsL_bact: ribosomal protein uS12 1 124 2.7E-70 T 01-11-2018 IPR005679 Ribosomal protein S12, bacterial-type GO:0003735|GO:0006412|GO:0015935 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 CDA09_19550 62e414091903df1a40c11fe46eac29b7 125 Hamap MF_00403_B 30S ribosomal protein S12 [rpsL]. 1 123 39.419 T 01-11-2018 IPR005679 Ribosomal protein S12, bacterial-type GO:0003735|GO:0006412|GO:0015935 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 CDA09_19550 62e414091903df1a40c11fe46eac29b7 125 SUPERFAMILY SSF50249 2 124 5.91E-53 T 01-11-2018 IPR012340 Nucleic acid-binding, OB-fold CDA09_19550 62e414091903df1a40c11fe46eac29b7 125 Gene3D G3DSA:2.40.50.140 1 125 1.4E-63 T 01-11-2018 CDA09_19550 62e414091903df1a40c11fe46eac29b7 125 ProSitePatterns PS00055 Ribosomal protein S12 signature. 43 50 - T 01-11-2018 IPR006032 Ribosomal protein S12/S23 GO:0003735|GO:0005622|GO:0005840|GO:0006412 CDA09_19550 62e414091903df1a40c11fe46eac29b7 125 Pfam PF00164 Ribosomal protein S12/S23 13 123 8.3E-43 T 01-11-2018 IPR006032 Ribosomal protein S12/S23 GO:0003735|GO:0005622|GO:0005840|GO:0006412 CDA09_19550 62e414091903df1a40c11fe46eac29b7 125 PRINTS PR01034 Ribosomal protein S12 signature 58 77 4.2E-61 T 01-11-2018 IPR006032 Ribosomal protein S12/S23 GO:0003735|GO:0005622|GO:0005840|GO:0006412 CDA09_19550 62e414091903df1a40c11fe46eac29b7 125 PRINTS PR01034 Ribosomal protein S12 signature 110 122 4.2E-61 T 01-11-2018 IPR006032 Ribosomal protein S12/S23 GO:0003735|GO:0005622|GO:0005840|GO:0006412 CDA09_19550 62e414091903df1a40c11fe46eac29b7 125 PRINTS PR01034 Ribosomal protein S12 signature 27 42 4.2E-61 T 01-11-2018 IPR006032 Ribosomal protein S12/S23 GO:0003735|GO:0005622|GO:0005840|GO:0006412 CDA09_19550 62e414091903df1a40c11fe46eac29b7 125 PRINTS PR01034 Ribosomal protein S12 signature 77 94 4.2E-61 T 01-11-2018 IPR006032 Ribosomal protein S12/S23 GO:0003735|GO:0005622|GO:0005840|GO:0006412 CDA09_19550 62e414091903df1a40c11fe46eac29b7 125 PRINTS PR01034 Ribosomal protein S12 signature 42 57 4.2E-61 T 01-11-2018 IPR006032 Ribosomal protein S12/S23 GO:0003735|GO:0005622|GO:0005840|GO:0006412 CDA09_19550 62e414091903df1a40c11fe46eac29b7 125 PRINTS PR01034 Ribosomal protein S12 signature 94 110 4.2E-61 T 01-11-2018 IPR006032 Ribosomal protein S12/S23 GO:0003735|GO:0005622|GO:0005840|GO:0006412 CDA09_19550 62e414091903df1a40c11fe46eac29b7 125 PIRSF PIRSF002133 1 124 1.8E-54 T 01-11-2018 IPR006032 Ribosomal protein S12/S23 GO:0003735|GO:0005622|GO:0005840|GO:0006412 CDA09_20590 81bc1b213f6d4d8aa19fd8d83caef07b 323 Gene3D G3DSA:3.40.50.40 213 322 3.6E-26 T 01-11-2018 IPR027473 L-asparaginase, C-terminal Reactome: R-HSA-70614 CDA09_20590 81bc1b213f6d4d8aa19fd8d83caef07b 323 SMART SM00870 3 318 3.3E-110 T 01-11-2018 IPR006034 Asparaginase/glutaminase-like Reactome: R-HSA-70614 CDA09_20590 81bc1b213f6d4d8aa19fd8d83caef07b 323 Pfam PF00710 Asparaginase, N-terminal 4 185 8.5E-55 T 01-11-2018 IPR027474 L-asparaginase, N-terminal Reactome: R-HSA-70614 CDA09_20590 81bc1b213f6d4d8aa19fd8d83caef07b 323 SUPERFAMILY SSF53774 1 311 3.4E-84 T 01-11-2018 IPR036152 Asparaginase/glutaminase-like superfamily Reactome: R-HSA-70614 CDA09_20590 81bc1b213f6d4d8aa19fd8d83caef07b 323 ProSitePatterns PS00917 Asparaginase / glutaminase active site signature 2. 85 95 - T 01-11-2018 IPR027475 Asparaginase/glutaminase, active site 2 Reactome: R-HSA-70614 CDA09_20590 81bc1b213f6d4d8aa19fd8d83caef07b 323 ProSitePatterns PS00144 Asparaginase / glutaminase active site signature 1. 6 14 - T 01-11-2018 IPR020827 Asparaginase/glutaminase, active site 1 GO:0006520 CDA09_20590 81bc1b213f6d4d8aa19fd8d83caef07b 323 PRINTS PR00139 Asparaginase/glutaminase family signature 4 15 9.4E-20 T 01-11-2018 IPR006034 Asparaginase/glutaminase-like Reactome: R-HSA-70614 CDA09_20590 81bc1b213f6d4d8aa19fd8d83caef07b 323 PRINTS PR00139 Asparaginase/glutaminase family signature 260 278 9.4E-20 T 01-11-2018 IPR006034 Asparaginase/glutaminase-like Reactome: R-HSA-70614 CDA09_20590 81bc1b213f6d4d8aa19fd8d83caef07b 323 PRINTS PR00139 Asparaginase/glutaminase family signature 84 102 9.4E-20 T 01-11-2018 IPR006034 Asparaginase/glutaminase-like Reactome: R-HSA-70614 CDA09_20590 81bc1b213f6d4d8aa19fd8d83caef07b 323 PIRSF PIRSF001220 1 322 1.1E-78 T 01-11-2018 IPR006034 Asparaginase/glutaminase-like Reactome: R-HSA-70614 CDA09_20590 81bc1b213f6d4d8aa19fd8d83caef07b 323 Gene3D G3DSA:3.40.50.1170 1 203 5.8E-73 T 01-11-2018 IPR037152 L-asparaginase, N-terminal domain superfamily Reactome: R-HSA-70614 CDA09_20590 81bc1b213f6d4d8aa19fd8d83caef07b 323 PIRSF PIRSF500176 1 322 8.6E-70 T 01-11-2018 CDA09_14715 a24ee78db5d4d6c32206ddd6b2d5ea29 420 Gene3D G3DSA:3.40.47.10 143 415 3.1E-129 T 01-11-2018 IPR016039 Thiolase-like GO:0003824 CDA09_14715 a24ee78db5d4d6c32206ddd6b2d5ea29 420 Pfam PF00108 Thiolase, N-terminal domain 21 286 5.6E-60 T 01-11-2018 IPR020616 Thiolase, N-terminal GO:0016747 CDA09_14715 a24ee78db5d4d6c32206ddd6b2d5ea29 420 TIGRFAM TIGR01930 AcCoA-C-Actrans: acetyl-CoA C-acyltransferase 23 416 1.5E-116 T 01-11-2018 IPR002155 Thiolase GO:0016747 CDA09_14715 a24ee78db5d4d6c32206ddd6b2d5ea29 420 PIRSF PIRSF000429 15 419 8.8E-111 T 01-11-2018 IPR002155 Thiolase GO:0016747 CDA09_14715 a24ee78db5d4d6c32206ddd6b2d5ea29 420 Gene3D G3DSA:3.40.47.10 23 301 3.1E-129 T 01-11-2018 IPR016039 Thiolase-like GO:0003824 CDA09_14715 a24ee78db5d4d6c32206ddd6b2d5ea29 420 SUPERFAMILY SSF53901 19 295 3.01E-63 T 01-11-2018 IPR016039 Thiolase-like GO:0003824 CDA09_14715 a24ee78db5d4d6c32206ddd6b2d5ea29 420 ProSitePatterns PS00099 Thiolases active site. 399 412 - T 01-11-2018 IPR020610 Thiolase, active site GO:0016747 CDA09_14715 a24ee78db5d4d6c32206ddd6b2d5ea29 420 ProSitePatterns PS00737 Thiolases signature 2. 364 380 - T 01-11-2018 IPR020613 Thiolase, conserved site GO:0016747 CDA09_14715 a24ee78db5d4d6c32206ddd6b2d5ea29 420 Pfam PF02803 Thiolase, C-terminal domain 296 416 5.1E-44 T 01-11-2018 IPR020617 Thiolase, C-terminal GO:0016747 CDA09_14715 a24ee78db5d4d6c32206ddd6b2d5ea29 420 SUPERFAMILY SSF53901 296 416 2.79E-38 T 01-11-2018 IPR016039 Thiolase-like GO:0003824 CDA09_12685 bf12f624f6904c84ebdb6224476e9925 457 SUPERFAMILY SSF52540 66 288 5.51E-49 T 01-11-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CDA09_12685 bf12f624f6904c84ebdb6224476e9925 457 Gene3D G3DSA:3.40.50.300 58 273 7.1E-39 T 01-11-2018 CDA09_12685 bf12f624f6904c84ebdb6224476e9925 457 Gene3D G3DSA:3.30.230.10 283 457 6.3E-18 T 01-11-2018 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup CDA09_12685 bf12f624f6904c84ebdb6224476e9925 457 PRINTS PR01874 DNA repair protein radA signature 81 109 7.0E-95 T 01-11-2018 CDA09_12685 bf12f624f6904c84ebdb6224476e9925 457 PRINTS PR01874 DNA repair protein radA signature 320 343 7.0E-95 T 01-11-2018 CDA09_12685 bf12f624f6904c84ebdb6224476e9925 457 PRINTS PR01874 DNA repair protein radA signature 246 272 7.0E-95 T 01-11-2018 CDA09_12685 bf12f624f6904c84ebdb6224476e9925 457 PRINTS PR01874 DNA repair protein radA signature 10 34 7.0E-95 T 01-11-2018 CDA09_12685 bf12f624f6904c84ebdb6224476e9925 457 PRINTS PR01874 DNA repair protein radA signature 211 239 7.0E-95 T 01-11-2018 CDA09_12685 bf12f624f6904c84ebdb6224476e9925 457 PRINTS PR01874 DNA repair protein radA signature 172 196 7.0E-95 T 01-11-2018 CDA09_12685 bf12f624f6904c84ebdb6224476e9925 457 PRINTS PR01874 DNA repair protein radA signature 122 139 7.0E-95 T 01-11-2018 CDA09_12685 bf12f624f6904c84ebdb6224476e9925 457 Hamap MF_01498 DNA repair protein RadA [radA]. 21 453 43.415 T 01-11-2018 IPR004504 DNA repair protein RadA GO:0003684|GO:0005524|GO:0006281 CDA09_12685 bf12f624f6904c84ebdb6224476e9925 457 Pfam PF13481 AAA domain 82 220 1.4E-13 T 01-11-2018 CDA09_12685 bf12f624f6904c84ebdb6224476e9925 457 TIGRFAM TIGR00416 sms: DNA repair protein RadA 1 449 2.0E-195 T 01-11-2018 IPR004504 DNA repair protein RadA GO:0003684|GO:0005524|GO:0006281 CDA09_12685 bf12f624f6904c84ebdb6224476e9925 457 SMART SM00382 89 242 3.5E-8 T 01-11-2018 IPR003593 AAA+ ATPase domain CDA09_12685 bf12f624f6904c84ebdb6224476e9925 457 Pfam PF05362 Lon protease (S16) C-terminal proteolytic domain 359 452 3.6E-6 T 01-11-2018 IPR008269 Peptidase S16, Lon proteolytic domain GO:0004176|GO:0004252|GO:0006508 CDA09_12685 bf12f624f6904c84ebdb6224476e9925 457 SUPERFAMILY SSF54211 253 454 1.06E-40 T 01-11-2018 IPR020568 Ribosomal protein S5 domain 2-type fold CDA09_09505 610300c26de4e4a355b11e2bfe3a7821 392 Gene3D G3DSA:3.40.50.10540 5 385 2.0E-116 T 01-11-2018 IPR023606 CoA-transferase family III domain superfamily CDA09_09505 610300c26de4e4a355b11e2bfe3a7821 392 SUPERFAMILY SSF89796 2 391 1.07E-124 T 01-11-2018 IPR023606 CoA-transferase family III domain superfamily CDA09_09505 610300c26de4e4a355b11e2bfe3a7821 392 Gene3D G3DSA:3.30.1540.10 227 320 2.0E-116 T 01-11-2018 CDA09_09505 610300c26de4e4a355b11e2bfe3a7821 392 Pfam PF02515 CoA-transferase family III 6 368 1.2E-104 T 01-11-2018 IPR003673 CoA-transferase family III GO:0003824 CDA09_14395 7c56486d8e01b0167eafc9d699602fe7 554 Pfam PF00005 ABC transporter 339 472 2.0E-22 T 01-11-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 CDA09_14395 7c56486d8e01b0167eafc9d699602fe7 554 ProSitePatterns PS00211 ABC transporters family signature. 162 176 - T 01-11-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 CDA09_14395 7c56486d8e01b0167eafc9d699602fe7 554 SMART SM00382 31 235 7.6E-9 T 01-11-2018 IPR003593 AAA+ ATPase domain CDA09_14395 7c56486d8e01b0167eafc9d699602fe7 554 SMART SM00382 347 525 5.0E-6 T 01-11-2018 IPR003593 AAA+ ATPase domain CDA09_14395 7c56486d8e01b0167eafc9d699602fe7 554 Pfam PF12848 ABC transporter 229 306 5.9E-12 T 01-11-2018 IPR032781 ABC-transporter extension domain CDA09_14395 7c56486d8e01b0167eafc9d699602fe7 554 Pfam PF00005 ABC transporter 23 190 3.4E-28 T 01-11-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 CDA09_14395 7c56486d8e01b0167eafc9d699602fe7 554 Gene3D G3DSA:3.40.50.300 1 284 3.2E-81 T 01-11-2018 CDA09_14395 7c56486d8e01b0167eafc9d699602fe7 554 SUPERFAMILY SSF52540 299 514 1.22E-43 T 01-11-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CDA09_14395 7c56486d8e01b0167eafc9d699602fe7 554 Gene3D G3DSA:3.40.50.300 285 552 2.4E-71 T 01-11-2018 CDA09_14395 7c56486d8e01b0167eafc9d699602fe7 554 TIGRFAM TIGR03719 ABC_ABC_ChvD: ATP-binding cassette protein, ChvD family 2 552 3.6E-285 T 01-11-2018 IPR022374 Energy-dependent translational throttle protein EttA GO:0045900 CDA09_14395 7c56486d8e01b0167eafc9d699602fe7 554 SUPERFAMILY SSF52540 17 241 8.89E-47 T 01-11-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CDA09_01320 cf518cfe19ba0e8bf2fcf2e74052dd9a 198 Pfam PF08534 Redoxin 36 181 2.3E-14 T 01-11-2018 IPR013740 Redoxin GO:0016491 Reactome: R-HSA-3299685|Reactome: R-HSA-5628897 CDA09_01320 cf518cfe19ba0e8bf2fcf2e74052dd9a 198 SUPERFAMILY SSF52833 40 194 1.54E-31 T 01-11-2018 IPR036249 Thioredoxin-like superfamily CDA09_01320 cf518cfe19ba0e8bf2fcf2e74052dd9a 198 ProSitePatterns PS00194 Thioredoxin family active site. 65 83 - T 01-11-2018 IPR017937 Thioredoxin, conserved site GO:0045454 CDA09_01320 cf518cfe19ba0e8bf2fcf2e74052dd9a 198 Gene3D G3DSA:3.40.30.10 22 197 9.4E-39 T 01-11-2018 CDA09_03675 3ac7a278078adea4367b06ead41a680a 607 Gene3D G3DSA:3.90.580.10 1 98 1.9E-38 T 01-11-2018 IPR036977 DNA Primase, CHC2-type zinc finger GO:0003677|GO:0006260|GO:0008270 CDA09_03675 3ac7a278078adea4367b06ead41a680a 607 Pfam PF13662 Toprim domain 255 318 2.4E-17 T 01-11-2018 IPR006171 TOPRIM domain CDA09_03675 3ac7a278078adea4367b06ead41a680a 607 Gene3D G3DSA:1.20.50.20 361 410 8.4E-6 T 01-11-2018 CDA09_03675 3ac7a278078adea4367b06ead41a680a 607 SUPERFAMILY SSF117023 466 595 1.57E-19 T 01-11-2018 CDA09_03675 3ac7a278078adea4367b06ead41a680a 607 SMART SM00766 464 592 1.6E-27 T 01-11-2018 IPR013173 DNA primase DnaG, DnaB-binding domain GO:0003896|GO:0006269 CDA09_03675 3ac7a278078adea4367b06ead41a680a 607 Gene3D G3DSA:3.90.980.10 112 233 5.5E-42 T 01-11-2018 IPR037068 DNA primase, catalytic core, N-terminal domain superfamily CDA09_03675 3ac7a278078adea4367b06ead41a680a 607 Hamap MF_00974 DNA primase [dnaG]. 1 593 28.533 T 01-11-2018 IPR030846 DNA primase DnaG, bacteria GO:0003896|GO:0006269|GO:0008270 CDA09_03675 3ac7a278078adea4367b06ead41a680a 607 Gene3D G3DSA:3.40.1360.10 234 360 2.9E-42 T 01-11-2018 CDA09_03675 3ac7a278078adea4367b06ead41a680a 607 Gene3D G3DSA:1.10.860.10 455 603 9.8E-15 T 01-11-2018 IPR016136 DNA helicase DnaB, N-terminal/DNA primase DnaG, C-terminal CDA09_03675 3ac7a278078adea4367b06ead41a680a 607 Pfam PF08278 DNA primase DnaG DnaB-binding 467 591 2.5E-21 T 01-11-2018 IPR013173 DNA primase DnaG, DnaB-binding domain GO:0003896|GO:0006269 CDA09_03675 3ac7a278078adea4367b06ead41a680a 607 Pfam PF10410 DnaB-helicase binding domain of primase 364 416 1.8E-12 T 01-11-2018 IPR019475 DNA primase, DnaB-helicase binding domain GO:0016779 CDA09_03675 3ac7a278078adea4367b06ead41a680a 607 SMART SM00400 33 87 1.6E-32 T 01-11-2018 IPR002694 Zinc finger, CHC2-type GO:0003677|GO:0003896|GO:0006260|GO:0008270 CDA09_03675 3ac7a278078adea4367b06ead41a680a 607 SUPERFAMILY SSF56731 113 416 7.85E-106 T 01-11-2018 CDA09_03675 3ac7a278078adea4367b06ead41a680a 607 Pfam PF08275 DNA primase catalytic core, N-terminal domain 123 244 2.7E-41 T 01-11-2018 IPR013264 DNA primase, catalytic core, N-terminal CDA09_03675 3ac7a278078adea4367b06ead41a680a 607 Pfam PF01807 CHC2 zinc finger 3 97 1.5E-37 T 01-11-2018 IPR002694 Zinc finger, CHC2-type GO:0003677|GO:0003896|GO:0006260|GO:0008270 CDA09_03675 3ac7a278078adea4367b06ead41a680a 607 TIGRFAM TIGR01391 dnaG: DNA primase 1 410 4.0E-143 T 01-11-2018 IPR006295 DNA primase, DnaG GO:0003896|GO:0006269 CDA09_03675 3ac7a278078adea4367b06ead41a680a 607 SMART SM00493 252 323 2.0E-17 T 01-11-2018 IPR006171 TOPRIM domain CDA09_03675 3ac7a278078adea4367b06ead41a680a 607 SUPERFAMILY SSF57783 1 97 1.87E-37 T 01-11-2018 CDA09_00565 fa343fc6da76f4d600d099b334e49f74 95 TIGRFAM TIGR00135 gatC: aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase, C subunit 4 95 3.6E-28 T 01-11-2018 IPR003837 Glu-tRNAGln amidotransferase C subunit GO:0006450 CDA09_00565 fa343fc6da76f4d600d099b334e49f74 95 SUPERFAMILY SSF141000 3 93 2.22E-27 T 01-11-2018 IPR036113 Glu-tRNAGln amidotransferase superfamily, subunit C GO:0006450 CDA09_00565 fa343fc6da76f4d600d099b334e49f74 95 Pfam PF02686 Glu-tRNAGln amidotransferase C subunit 21 90 2.7E-17 T 01-11-2018 IPR003837 Glu-tRNAGln amidotransferase C subunit GO:0006450 CDA09_00565 fa343fc6da76f4d600d099b334e49f74 95 Hamap MF_00122 Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit C [gatC]. 2 95 21.209 T 01-11-2018 IPR003837 Glu-tRNAGln amidotransferase C subunit GO:0006450 CDA09_00565 fa343fc6da76f4d600d099b334e49f74 95 Gene3D G3DSA:1.10.20.60 1 93 4.4E-23 T 01-11-2018 CDA09_13525 f080598df06cf94237beb714ecee3422 438 Pfam PF04909 Amidohydrolase 79 367 1.3E-25 T 01-11-2018 IPR006680 Amidohydrolase-related GO:0016787 CDA09_13525 f080598df06cf94237beb714ecee3422 438 SUPERFAMILY SSF51556 9 378 2.55E-76 T 01-11-2018 IPR032466 Metal-dependent hydrolase CDA09_13525 f080598df06cf94237beb714ecee3422 438 Gene3D G3DSA:3.20.20.140 4 372 6.1E-86 T 01-11-2018 CDA09_13225 6382a8e0d06f5558a490482482cc0350 242 SMART SM00345 15 74 3.1E-20 T 01-11-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 CDA09_13225 6382a8e0d06f5558a490482482cc0350 242 SMART SM00866 94 236 3.0E-29 T 01-11-2018 IPR011663 UbiC transcription regulator-associated GO:0003677|GO:0006355 CDA09_13225 6382a8e0d06f5558a490482482cc0350 242 Gene3D G3DSA:3.40.1410.10 83 241 5.7E-46 T 01-11-2018 IPR028978 Chorismate pyruvate-lyase/UbiC transcription regulator-associated domain superfamily CDA09_13225 6382a8e0d06f5558a490482482cc0350 242 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 48 64 3.5E-7 T 01-11-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 CDA09_13225 6382a8e0d06f5558a490482482cc0350 242 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 34 48 3.5E-7 T 01-11-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 CDA09_13225 6382a8e0d06f5558a490482482cc0350 242 SUPERFAMILY SSF46785 9 87 2.77E-22 T 01-11-2018 IPR036390 Winged helix DNA-binding domain superfamily CDA09_13225 6382a8e0d06f5558a490482482cc0350 242 SUPERFAMILY SSF64288 63 240 1.38E-38 T 01-11-2018 IPR028978 Chorismate pyruvate-lyase/UbiC transcription regulator-associated domain superfamily CDA09_13225 6382a8e0d06f5558a490482482cc0350 242 Gene3D G3DSA:1.10.10.10 7 75 3.7E-25 T 01-11-2018 IPR036388 Winged helix-like DNA-binding domain superfamily CDA09_13225 6382a8e0d06f5558a490482482cc0350 242 Pfam PF07702 UTRA domain 106 232 3.2E-33 T 01-11-2018 IPR011663 UbiC transcription regulator-associated GO:0003677|GO:0006355 CDA09_13225 6382a8e0d06f5558a490482482cc0350 242 Pfam PF00392 Bacterial regulatory proteins, gntR family 11 74 7.0E-21 T 01-11-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 CDA09_15600 aa5bc0b982e5f989b748b9c658b8aefb 382 Pfam PF14319 Transposase zinc-binding domain 10 114 1.3E-34 T 01-11-2018 IPR026889 Transposase zinc-binding domain CDA09_15600 aa5bc0b982e5f989b748b9c658b8aefb 382 Pfam PF04986 Putative transposase 143 315 2.3E-52 T 01-11-2018 IPR007069 Transposase, IS801/IS1294 GO:0003677|GO:0004803|GO:0006313 CDA09_06520 aa5bc0b982e5f989b748b9c658b8aefb 382 Pfam PF14319 Transposase zinc-binding domain 10 114 1.3E-34 T 01-11-2018 IPR026889 Transposase zinc-binding domain CDA09_06520 aa5bc0b982e5f989b748b9c658b8aefb 382 Pfam PF04986 Putative transposase 143 315 2.3E-52 T 01-11-2018 IPR007069 Transposase, IS801/IS1294 GO:0003677|GO:0004803|GO:0006313 CDA09_13670 969231721a552dc22d54709e0ed4e5da 132 Pfam PF01796 DUF35 OB-fold domain, acyl-CoA-associated 54 118 9.9E-19 T 01-11-2018 IPR002878 Domain of unknown function DUF35, OB-fold, C-terminal CDA09_13670 969231721a552dc22d54709e0ed4e5da 132 SUPERFAMILY SSF50249 3 124 1.11E-35 T 01-11-2018 IPR012340 Nucleic acid-binding, OB-fold CDA09_13670 969231721a552dc22d54709e0ed4e5da 132 Pfam PF12172 Rubredoxin-like zinc ribbon domain (DUF35_N) 16 51 3.2E-14 T 01-11-2018 IPR022002 Domain of unknown function DUF35, rubredoxin-like zinc ribbon domain, N-terminal CDA09_02625 8bf57afdaaff977e4aab3f2cd7549ca8 183 PIRSF PIRSF006135 3 182 1.5E-52 T 01-11-2018 IPR003203 Cobinamide kinase/cobinamide phosphate guanyltransferase GO:0000166|GO:0009236|GO:0043752|GO:0051188 KEGG: 00860+2.7.7.62+2.7.1.156|MetaCyc: PWY-6269|MetaCyc: PWY-7962|MetaCyc: PWY-7971|MetaCyc: PWY-7972 CDA09_02625 8bf57afdaaff977e4aab3f2cd7549ca8 183 Pfam PF02283 Cobinamide kinase / cobinamide phosphate guanyltransferase 5 179 8.1E-58 T 01-11-2018 IPR003203 Cobinamide kinase/cobinamide phosphate guanyltransferase GO:0000166|GO:0009236|GO:0043752|GO:0051188 KEGG: 00860+2.7.7.62+2.7.1.156|MetaCyc: PWY-6269|MetaCyc: PWY-7962|MetaCyc: PWY-7971|MetaCyc: PWY-7972 CDA09_02625 8bf57afdaaff977e4aab3f2cd7549ca8 183 Gene3D G3DSA:3.40.50.300 4 180 1.9E-56 T 01-11-2018 CDA09_02625 8bf57afdaaff977e4aab3f2cd7549ca8 183 SUPERFAMILY SSF52540 4 180 5.72E-52 T 01-11-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CDA09_00985 78a8799ee52ba18dc71ec5babe693c2f 470 Pfam PF02954 Bacterial regulatory protein, Fis family 423 463 3.9E-11 T 01-11-2018 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 CDA09_00985 78a8799ee52ba18dc71ec5babe693c2f 470 SMART SM00382 171 316 1.8E-7 T 01-11-2018 IPR003593 AAA+ ATPase domain CDA09_00985 78a8799ee52ba18dc71ec5babe693c2f 470 PRINTS PR01590 FIS bacterial regulatory protein HTH signature 446 466 3.9E-10 T 01-11-2018 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 CDA09_00985 78a8799ee52ba18dc71ec5babe693c2f 470 PRINTS PR01590 FIS bacterial regulatory protein HTH signature 429 446 3.9E-10 T 01-11-2018 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 CDA09_00985 78a8799ee52ba18dc71ec5babe693c2f 470 SUPERFAMILY SSF46689 364 465 1.43E-10 T 01-11-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 CDA09_00985 78a8799ee52ba18dc71ec5babe693c2f 470 Pfam PF00158 Sigma-54 interaction domain 159 317 1.2E-63 T 01-11-2018 IPR002078 RNA polymerase sigma factor 54 interaction domain GO:0005524|GO:0006355|GO:0008134 CDA09_00985 78a8799ee52ba18dc71ec5babe693c2f 470 Gene3D G3DSA:3.40.50.2300 2 132 1.5E-34 T 01-11-2018 CDA09_00985 78a8799ee52ba18dc71ec5babe693c2f 470 SUPERFAMILY SSF52172 4 193 1.42E-41 T 01-11-2018 IPR011006 CheY-like superfamily CDA09_00985 78a8799ee52ba18dc71ec5babe693c2f 470 ProSitePatterns PS00688 Sigma-54 interaction domain C-terminal part signature. 364 373 - T 01-11-2018 IPR025944 Sigma-54 interaction domain, conserved site CDA09_00985 78a8799ee52ba18dc71ec5babe693c2f 470 Pfam PF00072 Response regulator receiver domain 5 113 2.8E-26 T 01-11-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 CDA09_00985 78a8799ee52ba18dc71ec5babe693c2f 470 Gene3D G3DSA:1.10.8.60 322 389 6.3E-22 T 01-11-2018 CDA09_00985 78a8799ee52ba18dc71ec5babe693c2f 470 ProSitePatterns PS00676 Sigma-54 interaction domain ATP-binding region B signature. 237 252 - T 01-11-2018 IPR025943 Sigma-54 interaction domain, ATP-binding site 2 CDA09_00985 78a8799ee52ba18dc71ec5babe693c2f 470 SUPERFAMILY SSF52540 144 392 5.82E-68 T 01-11-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CDA09_00985 78a8799ee52ba18dc71ec5babe693c2f 470 Gene3D G3DSA:1.10.10.60 416 467 2.3E-12 T 01-11-2018 CDA09_00985 78a8799ee52ba18dc71ec5babe693c2f 470 ProSitePatterns PS00675 Sigma-54 interaction domain ATP-binding region A signature. 175 188 - T 01-11-2018 IPR025662 Sigma-54 interaction domain, ATP-binding site 1 CDA09_00985 78a8799ee52ba18dc71ec5babe693c2f 470 SMART SM00448 3 114 3.8E-33 T 01-11-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 CDA09_00985 78a8799ee52ba18dc71ec5babe693c2f 470 Gene3D G3DSA:3.40.50.300 133 321 7.4E-60 T 01-11-2018 CDA09_12745 61d743665558380ba4d19984903da454 262 Pfam PF13616 PPIC-type PPIASE domain 135 224 7.5E-21 T 01-11-2018 CDA09_12745 61d743665558380ba4d19984903da454 262 SUPERFAMILY SSF54534 134 223 8.83E-26 T 01-11-2018 CDA09_12745 61d743665558380ba4d19984903da454 262 SUPERFAMILY SSF109998 29 164 7.45E-20 T 01-11-2018 IPR027304 Trigger factor/SurA domain superfamily CDA09_12745 61d743665558380ba4d19984903da454 262 Gene3D G3DSA:3.10.50.40 132 221 6.1E-30 T 01-11-2018 CDA09_13600 f501fa26cbf875b0d936e0e8b23565ce 390 Gene3D G3DSA:3.40.47.10 6 273 3.9E-146 T 01-11-2018 IPR016039 Thiolase-like GO:0003824 CDA09_13600 f501fa26cbf875b0d936e0e8b23565ce 390 SUPERFAMILY SSF53901 268 389 2.49E-43 T 01-11-2018 IPR016039 Thiolase-like GO:0003824 CDA09_13600 f501fa26cbf875b0d936e0e8b23565ce 390 PIRSF PIRSF000429 1 390 2.2E-125 T 01-11-2018 IPR002155 Thiolase GO:0016747 CDA09_13600 f501fa26cbf875b0d936e0e8b23565ce 390 SUPERFAMILY SSF53901 3 266 1.89E-73 T 01-11-2018 IPR016039 Thiolase-like GO:0003824 CDA09_13600 f501fa26cbf875b0d936e0e8b23565ce 390 Pfam PF00108 Thiolase, N-terminal domain 4 259 1.4E-72 T 01-11-2018 IPR020616 Thiolase, N-terminal GO:0016747 CDA09_13600 f501fa26cbf875b0d936e0e8b23565ce 390 Gene3D G3DSA:3.40.47.10 127 387 3.9E-146 T 01-11-2018 IPR016039 Thiolase-like GO:0003824 CDA09_13600 f501fa26cbf875b0d936e0e8b23565ce 390 Pfam PF02803 Thiolase, C-terminal domain 268 389 3.0E-47 T 01-11-2018 IPR020617 Thiolase, C-terminal GO:0016747 CDA09_13600 f501fa26cbf875b0d936e0e8b23565ce 390 ProSitePatterns PS00737 Thiolases signature 2. 336 352 - T 01-11-2018 IPR020613 Thiolase, conserved site GO:0016747 CDA09_13600 f501fa26cbf875b0d936e0e8b23565ce 390 TIGRFAM TIGR01930 AcCoA-C-Actrans: acetyl-CoA C-acyltransferase 6 388 1.6E-135 T 01-11-2018 IPR002155 Thiolase GO:0016747 CDA09_18910 ba5dc1c0a156eb8be7641f267e7b9634 460 Gene3D G3DSA:1.20.140.90 26 169 1.6E-35 T 01-11-2018 IPR038351 Malonyl-CoA decarboxylase, N-terminal domain superfamily KEGG: 00410+4.1.1.9|KEGG: 00640+4.1.1.9|Reactome: R-HSA-390247|Reactome: R-HSA-9033241 CDA09_18910 ba5dc1c0a156eb8be7641f267e7b9634 460 Pfam PF05292 Malonyl-CoA decarboxylase C-terminal domain 173 431 2.2E-113 T 01-11-2018 IPR007956 Malonyl-CoA decarboxylase, C-terminal GO:0006633|GO:0050080 KEGG: 00410+4.1.1.9|KEGG: 00640+4.1.1.9|Reactome: R-HSA-390247|Reactome: R-HSA-9033241 CDA09_18910 ba5dc1c0a156eb8be7641f267e7b9634 460 Pfam PF17408 Malonyl-CoA decarboxylase N-terminal domain 83 170 2.3E-27 T 01-11-2018 IPR035372 Malonyl-CoA decarboxylase, N-terminal KEGG: 00410+4.1.1.9|KEGG: 00640+4.1.1.9|Reactome: R-HSA-390247|Reactome: R-HSA-9033241 CDA09_18910 ba5dc1c0a156eb8be7641f267e7b9634 460 Gene3D G3DSA:3.40.630.150 172 460 3.0E-111 T 01-11-2018 CDA09_19740 2072d7679fcbcced04ccac364e968aa0 658 Gene3D G3DSA:3.40.50.12780 9 328 5.4E-48 T 01-11-2018 CDA09_19740 2072d7679fcbcced04ccac364e968aa0 658 Gene3D G3DSA:3.40.50.12780 341 472 4.7E-33 T 01-11-2018 CDA09_19740 2072d7679fcbcced04ccac364e968aa0 658 ProSitePatterns PS00455 Putative AMP-binding domain signature. 196 207 - T 01-11-2018 IPR020845 AMP-binding, conserved site CDA09_19740 2072d7679fcbcced04ccac364e968aa0 658 SUPERFAMILY SSF56801 12 616 1.11E-107 T 01-11-2018 CDA09_19740 2072d7679fcbcced04ccac364e968aa0 658 Pfam PF00501 AMP-binding enzyme 23 481 4.1E-86 T 01-11-2018 IPR000873 AMP-dependent synthetase/ligase GO:0003824 CDA09_20650 980f0213d88bbef1bc049e1a6ed35eb0 179 Gene3D G3DSA:3.60.20.10 2 178 8.1E-66 T 01-11-2018 IPR029055 Nucleophile aminohydrolases, N-terminal CDA09_20650 980f0213d88bbef1bc049e1a6ed35eb0 179 SUPERFAMILY SSF56235 3 177 2.85E-58 T 01-11-2018 IPR029055 Nucleophile aminohydrolases, N-terminal CDA09_20650 980f0213d88bbef1bc049e1a6ed35eb0 179 PIRSF PIRSF039093 1 179 3.3E-85 T 01-11-2018 IPR022281 ATP-dependent protease, HslV subunit GO:0004298|GO:0006508|GO:0009376 CDA09_20650 980f0213d88bbef1bc049e1a6ed35eb0 179 TIGRFAM TIGR03692 ATP_dep_HslV: ATP-dependent protease HslVU, peptidase subunit 7 176 1.1E-83 T 01-11-2018 IPR022281 ATP-dependent protease, HslV subunit GO:0004298|GO:0006508|GO:0009376 CDA09_20650 980f0213d88bbef1bc049e1a6ed35eb0 179 Hamap MF_00248 ATP-dependent protease subunit HslV [hslV]. 6 177 40.934 T 01-11-2018 IPR022281 ATP-dependent protease, HslV subunit GO:0004298|GO:0006508|GO:0009376 CDA09_20650 980f0213d88bbef1bc049e1a6ed35eb0 179 Pfam PF00227 Proteasome subunit 5 176 6.2E-21 T 01-11-2018 IPR001353 Proteasome, subunit alpha/beta GO:0004298|GO:0005839|GO:0051603 Reactome: R-HSA-1169091|Reactome: R-HSA-1234176|Reactome: R-HSA-1236974|Reactome: R-HSA-1236978|Reactome: R-HSA-174084|Reactome: R-HSA-174113|Reactome: R-HSA-174154|Reactome: R-HSA-174178|Reactome: R-HSA-174184|Reactome: R-HSA-180534|Reactome: R-HSA-180585|Reactome: R-HSA-187577|Reactome: R-HSA-195253|Reactome: R-HSA-202424|Reactome: R-HSA-211733|Reactome: R-HSA-2467813|Reactome: R-HSA-2871837|Reactome: R-HSA-349425|Reactome: R-HSA-350562|Reactome: R-HSA-382556|Reactome: R-HSA-450408|Reactome: R-HSA-4608870|Reactome: R-HSA-4641257|Reactome: R-HSA-4641258|Reactome: R-HSA-5358346|Reactome: R-HSA-5362768|Reactome: R-HSA-5607761|Reactome: R-HSA-5607764|Reactome: R-HSA-5610780|Reactome: R-HSA-5610783|Reactome: R-HSA-5610785|Reactome: R-HSA-5632684|Reactome: R-HSA-5658442|Reactome: R-HSA-5668541|Reactome: R-HSA-5676590|Reactome: R-HSA-5678895|Reactome: R-HSA-5687128|Reactome: R-HSA-5689603|Reactome: R-HSA-5689880|Reactome: R-HSA-68827|Reactome: R-HSA-68949|Reactome: R-HSA-69017|Reactome: R-HSA-69229|Reactome: R-HSA-69481|Reactome: R-HSA-69601|Reactome: R-HSA-8852276|Reactome: R-HSA-8854050|Reactome: R-HSA-8939236|Reactome: R-HSA-8939902|Reactome: R-HSA-8941858|Reactome: R-HSA-8948751|Reactome: R-HSA-8951664|Reactome: R-HSA-9010553|Reactome: R-HSA-9020702|Reactome: R-HSA-9604323|Reactome: R-HSA-983168 CDA09_16045 d049ca0749ba9f86be74e3d07f5a47b8 475 Pfam PF04055 Radical SAM superfamily 106 253 3.8E-14 T 01-11-2018 IPR007197 Radical SAM GO:0003824|GO:0051536 CDA09_16045 d049ca0749ba9f86be74e3d07f5a47b8 475 SMART SM00729 101 318 0.0011 T 01-11-2018 IPR006638 Elp3/MiaB/NifB GO:0003824|GO:0051536 CDA09_16045 d049ca0749ba9f86be74e3d07f5a47b8 475 Pfam PF13353 4Fe-4S single cluster domain 105 227 7.2E-14 T 01-11-2018 CDA09_16045 d049ca0749ba9f86be74e3d07f5a47b8 475 Gene3D G3DSA:3.20.20.70 98 457 8.8E-68 T 01-11-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 CDA09_16045 d049ca0749ba9f86be74e3d07f5a47b8 475 SUPERFAMILY SSF102114 99 420 1.96E-45 T 01-11-2018 CDA09_16045 d049ca0749ba9f86be74e3d07f5a47b8 475 TIGRFAM TIGR04085 rSAM_more_4Fe4S: radical SAM additional 4Fe4S-binding SPASM domain 352 439 4.1E-12 T 01-11-2018 IPR023885 4Fe4S-binding SPASM domain CDA09_16045 d049ca0749ba9f86be74e3d07f5a47b8 475 TIGRFAM TIGR03906 quino_hemo_SAM: quinohemoprotein amine dehydrogenase maturation protein 9 473 3.1E-223 T 01-11-2018 IPR023886 Quinohemoprotein amine dehydrogenase, gamma subunit maturation protein CDA09_12365 eca6613cd33c8b167d2aa125a35db5f3 330 Gene3D G3DSA:3.30.200.70 11 106 2.5E-119 T 01-11-2018 CDA09_12365 eca6613cd33c8b167d2aa125a35db5f3 330 Gene3D G3DSA:1.10.510.10 58 263 2.5E-119 T 01-11-2018 CDA09_12365 eca6613cd33c8b167d2aa125a35db5f3 330 SUPERFAMILY SSF56112 5 329 6.85E-84 T 01-11-2018 IPR011009 Protein kinase-like domain superfamily CDA09_12365 eca6613cd33c8b167d2aa125a35db5f3 330 Pfam PF01636 Phosphotransferase enzyme family 34 267 1.9E-37 T 01-11-2018 IPR002575 Aminoglycoside phosphotransferase CDA09_12365 eca6613cd33c8b167d2aa125a35db5f3 330 Hamap MF_01497 Stress response kinase A [srkA]. 2 323 47.676 T 01-11-2018 IPR032882 SrkA/RdoA protein kinase GO:0004674|GO:0006468 KEGG: 04150+2.7.11.1|KEGG: 04151+2.7.11.1|KEGG: 04714+2.7.11.1|KEGG: 04926+2.7.11.1|KEGG: 05163+2.7.11.1|KEGG: 05165+2.7.11.1|KEGG: 05170+2.7.11.1 CDA09_12365 eca6613cd33c8b167d2aa125a35db5f3 330 Gene3D G3DSA:1.20.1270.170 147 312 2.5E-119 T 01-11-2018 CDA09_00265 925401480c2a823bdc4eb9ff86dbb2f4 167 PRINTS PR01576 Peptide deformylase signature 101 119 1.6E-38 T 01-11-2018 IPR023635 Peptide deformylase CDA09_00265 925401480c2a823bdc4eb9ff86dbb2f4 167 PRINTS PR01576 Peptide deformylase signature 89 100 1.6E-38 T 01-11-2018 IPR023635 Peptide deformylase CDA09_00265 925401480c2a823bdc4eb9ff86dbb2f4 167 PRINTS PR01576 Peptide deformylase signature 120 149 1.6E-38 T 01-11-2018 IPR023635 Peptide deformylase CDA09_00265 925401480c2a823bdc4eb9ff86dbb2f4 167 PRINTS PR01576 Peptide deformylase signature 33 62 1.6E-38 T 01-11-2018 IPR023635 Peptide deformylase CDA09_00265 925401480c2a823bdc4eb9ff86dbb2f4 167 Gene3D G3DSA:3.90.45.10 1 166 1.2E-60 T 01-11-2018 IPR036821 Peptide deformylase superfamily CDA09_00265 925401480c2a823bdc4eb9ff86dbb2f4 167 PIRSF PIRSF004749 1 166 2.6E-53 T 01-11-2018 IPR023635 Peptide deformylase CDA09_00265 925401480c2a823bdc4eb9ff86dbb2f4 167 Hamap MF_00163 Peptide deformylase [def]. 2 162 30.122 T 01-11-2018 IPR023635 Peptide deformylase CDA09_00265 925401480c2a823bdc4eb9ff86dbb2f4 167 SUPERFAMILY SSF56420 3 163 1.05E-59 T 01-11-2018 IPR036821 Peptide deformylase superfamily CDA09_00265 925401480c2a823bdc4eb9ff86dbb2f4 167 TIGRFAM TIGR00079 pept_deformyl: peptide deformylase 5 158 7.3E-53 T 01-11-2018 IPR023635 Peptide deformylase CDA09_00265 925401480c2a823bdc4eb9ff86dbb2f4 167 Pfam PF01327 Polypeptide deformylase 5 151 9.0E-49 T 01-11-2018 IPR023635 Peptide deformylase CDA09_05190 a28a5f6f6d5a7a12b9ac27e450d1ed2e 438 SUPERFAMILY SSF55729 292 417 1.59E-21 T 01-11-2018 IPR016181 Acyl-CoA N-acyltransferase CDA09_05190 a28a5f6f6d5a7a12b9ac27e450d1ed2e 438 Hamap MF_01105 Amino-acid acetyltransferase [argA]. 1 438 200.786 T 01-11-2018 IPR010167 Amino-acid N-acetyltransferase GO:0004042|GO:0005737|GO:0006526 KEGG: 00220+2.3.1.1|MetaCyc: PWY-5154 CDA09_05190 a28a5f6f6d5a7a12b9ac27e450d1ed2e 438 Pfam PF00583 Acetyltransferase (GNAT) family 331 404 6.6E-12 T 01-11-2018 IPR000182 GNAT domain CDA09_05190 a28a5f6f6d5a7a12b9ac27e450d1ed2e 438 Pfam PF00696 Amino acid kinase family 26 264 1.2E-35 T 01-11-2018 IPR001048 Aspartate/glutamate/uridylate kinase Reactome: R-HSA-70614 CDA09_05190 a28a5f6f6d5a7a12b9ac27e450d1ed2e 438 Gene3D G3DSA:3.40.1160.10 6 290 2.4E-88 T 01-11-2018 IPR036393 Acetylglutamate kinase-like superfamily CDA09_05190 a28a5f6f6d5a7a12b9ac27e450d1ed2e 438 SUPERFAMILY SSF53633 4 289 1.57E-69 T 01-11-2018 IPR036393 Acetylglutamate kinase-like superfamily CDA09_05190 a28a5f6f6d5a7a12b9ac27e450d1ed2e 438 Gene3D G3DSA:3.40.630.30 293 438 1.7E-40 T 01-11-2018 CDA09_05190 a28a5f6f6d5a7a12b9ac27e450d1ed2e 438 TIGRFAM TIGR01890 N-Ac-Glu-synth: amino-acid N-acetyltransferase 8 438 2.7E-170 T 01-11-2018 IPR010167 Amino-acid N-acetyltransferase GO:0004042|GO:0005737|GO:0006526 KEGG: 00220+2.3.1.1|MetaCyc: PWY-5154 CDA09_05190 a28a5f6f6d5a7a12b9ac27e450d1ed2e 438 PIRSF PIRSF000423 1 438 3.6E-186 T 01-11-2018 IPR010167 Amino-acid N-acetyltransferase GO:0004042|GO:0005737|GO:0006526 KEGG: 00220+2.3.1.1|MetaCyc: PWY-5154 CDA09_12355 8ebb050c5b8263b757ed0d2702594666 181 Gene3D G3DSA:3.10.640.10 1 180 2.9E-77 T 01-11-2018 IPR038590 YaeQ superfamily CDA09_12355 8ebb050c5b8263b757ed0d2702594666 181 SUPERFAMILY SSF52980 2 178 1.07E-73 T 01-11-2018 IPR011335 Restriction endonuclease type II-like Reactome: R-HSA-6783310 CDA09_12355 8ebb050c5b8263b757ed0d2702594666 181 SMART SM01322 1 175 1.9E-121 T 01-11-2018 IPR009822 YaeQ CDA09_12355 8ebb050c5b8263b757ed0d2702594666 181 PIRSF PIRSF011484 1 179 1.1E-72 T 01-11-2018 IPR009822 YaeQ CDA09_12355 8ebb050c5b8263b757ed0d2702594666 181 Pfam PF07152 YaeQ protein 1 172 6.3E-78 T 01-11-2018 IPR009822 YaeQ CDA09_10510 83724b4b6a565e9f6741697ad983568b 439 Pfam PF00501 AMP-binding enzyme 89 293 1.6E-19 T 01-11-2018 IPR000873 AMP-dependent synthetase/ligase GO:0003824 CDA09_10510 83724b4b6a565e9f6741697ad983568b 439 PIRSF PIRSF006444 5 437 3.1E-211 T 01-11-2018 IPR011880 Phenylacetate-CoA ligase GO:0010124|GO:0047475 KEGG: 00360+6.2.1.30|MetaCyc: PWY-1341|MetaCyc: PWY-6318|MetaCyc: PWY-7716 CDA09_10510 83724b4b6a565e9f6741697ad983568b 439 Gene3D G3DSA:3.40.50.12780 3 330 1.6E-143 T 01-11-2018 CDA09_10510 83724b4b6a565e9f6741697ad983568b 439 SUPERFAMILY SSF56801 25 407 1.7E-63 T 01-11-2018 CDA09_10510 83724b4b6a565e9f6741697ad983568b 439 TIGRFAM TIGR02155 PA_CoA_ligase: phenylacetate-CoA ligase 15 435 5.5E-225 T 01-11-2018 IPR011880 Phenylacetate-CoA ligase GO:0010124|GO:0047475 KEGG: 00360+6.2.1.30|MetaCyc: PWY-1341|MetaCyc: PWY-6318|MetaCyc: PWY-7716 CDA09_10510 83724b4b6a565e9f6741697ad983568b 439 Gene3D G3DSA:3.30.300.30 331 437 3.8E-29 T 01-11-2018 CDA09_10510 83724b4b6a565e9f6741697ad983568b 439 Pfam PF14535 AMP-binding enzyme C-terminal domain 339 435 1.2E-25 T 01-11-2018 IPR028154 AMP-dependent ligase, C-terminal CDA09_06710 eb03e50f195787058b53322bc32a2ff5 134 ProSitePatterns PS00588 Flagella basal body rod proteins signature. 15 35 - T 01-11-2018 IPR019776 Flagellar basal body rod protein, conserved site CDA09_06710 eb03e50f195787058b53322bc32a2ff5 134 PIRSF PIRSF002889 1 134 2.1E-41 T 01-11-2018 IPR006300 Flagellar basal-body rod protein FlgB GO:0030694|GO:0071973 CDA09_06710 eb03e50f195787058b53322bc32a2ff5 134 Pfam PF00460 Flagella basal body rod protein 9 39 1.3E-11 T 01-11-2018 IPR001444 Flagellar basal body rod protein, N-terminal GO:0071973 CDA09_06710 eb03e50f195787058b53322bc32a2ff5 134 TIGRFAM TIGR01396 FlgB: flagellar basal-body rod protein FlgB 6 131 1.7E-35 T 01-11-2018 IPR006300 Flagellar basal-body rod protein FlgB GO:0030694|GO:0071973 CDA09_14305 f13dffbe9a74a738296982aaabcfe795 323 Pfam PF00849 RNA pseudouridylate synthase 123 256 1.6E-16 T 01-11-2018 IPR006145 Pseudouridine synthase, RsuA/RluB/C/D/E/F GO:0001522|GO:0003723|GO:0009451|GO:0009982 CDA09_14305 f13dffbe9a74a738296982aaabcfe795 323 TIGRFAM TIGR00093 TIGR00093: pseudouridine synthase 127 287 3.0E-55 T 01-11-2018 IPR000748 Pseudouridine synthase, RsuA/RluB/E/F GO:0001522|GO:0003723|GO:0009451|GO:0016866 CDA09_14305 f13dffbe9a74a738296982aaabcfe795 323 SUPERFAMILY SSF55120 121 290 2.04E-42 T 01-11-2018 IPR020103 Pseudouridine synthase, catalytic domain superfamily GO:0001522|GO:0003723|GO:0009451|GO:0009982 CDA09_14305 f13dffbe9a74a738296982aaabcfe795 323 SUPERFAMILY SSF55174 60 148 7.51E-17 T 01-11-2018 CDA09_14305 f13dffbe9a74a738296982aaabcfe795 323 SMART SM00363 60 118 7.2E-13 T 01-11-2018 IPR002942 RNA-binding S4 domain GO:0003723 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 CDA09_14305 f13dffbe9a74a738296982aaabcfe795 323 ProSitePatterns PS01149 Rsu family of pseudouridine synthase signature. 161 175 - T 01-11-2018 IPR018496 Pseudouridine synthase, RsuA/RluB/E/F, conserved site GO:0001522|GO:0003723|GO:0009451|GO:0016866 CDA09_14305 f13dffbe9a74a738296982aaabcfe795 323 Gene3D G3DSA:3.10.290.10 56 115 4.5E-21 T 01-11-2018 IPR036986 RNA-binding S4 domain superfamily GO:0003723 CDA09_14305 f13dffbe9a74a738296982aaabcfe795 323 Gene3D G3DSA:3.30.70.1560 185 275 1.1E-51 T 01-11-2018 CDA09_14305 f13dffbe9a74a738296982aaabcfe795 323 Pfam PF01479 S4 domain 60 105 8.6E-13 T 01-11-2018 IPR002942 RNA-binding S4 domain GO:0003723 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 CDA09_14305 f13dffbe9a74a738296982aaabcfe795 323 Gene3D G3DSA:3.30.70.580 125 283 1.1E-51 T 01-11-2018 CDA09_01810 1114a21ae7e99344e2ee8677f55ddd69 201 PIRSF PIRSF000498 1 201 7.8E-70 T 01-11-2018 IPR001783 Lumazine-binding protein KEGG: 00740+2.5.1.9|MetaCyc: PWY-6167|MetaCyc: PWY-6168 CDA09_01810 1114a21ae7e99344e2ee8677f55ddd69 201 SUPERFAMILY SSF63380 92 194 1.19E-33 T 01-11-2018 IPR017938 Riboflavin synthase-like beta-barrel CDA09_01810 1114a21ae7e99344e2ee8677f55ddd69 201 Gene3D G3DSA:2.40.30.20 101 201 1.2E-34 T 01-11-2018 IPR023366 ATP synthase subunit alpha, N-terminal domain-like superfamily KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980 CDA09_01810 1114a21ae7e99344e2ee8677f55ddd69 201 Pfam PF00677 Lumazine binding domain 3 86 1.6E-15 T 01-11-2018 IPR026017 Lumazine-binding domain KEGG: 00740+2.5.1.9|MetaCyc: PWY-6167|MetaCyc: PWY-6168 CDA09_01810 1114a21ae7e99344e2ee8677f55ddd69 201 Pfam PF00677 Lumazine binding domain 99 183 1.2E-25 T 01-11-2018 IPR026017 Lumazine-binding domain KEGG: 00740+2.5.1.9|MetaCyc: PWY-6167|MetaCyc: PWY-6168 CDA09_01810 1114a21ae7e99344e2ee8677f55ddd69 201 TIGRFAM TIGR00187 ribE: riboflavin synthase, alpha subunit 1 196 2.0E-57 T 01-11-2018 IPR001783 Lumazine-binding protein KEGG: 00740+2.5.1.9|MetaCyc: PWY-6167|MetaCyc: PWY-6168 CDA09_01810 1114a21ae7e99344e2ee8677f55ddd69 201 SUPERFAMILY SSF63380 1 92 3.23E-20 T 01-11-2018 IPR017938 Riboflavin synthase-like beta-barrel CDA09_01810 1114a21ae7e99344e2ee8677f55ddd69 201 Gene3D G3DSA:2.40.30.20 1 88 2.0E-21 T 01-11-2018 IPR023366 ATP synthase subunit alpha, N-terminal domain-like superfamily KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980 CDA09_04570 c993b8e2ae89f268d16598bda2bfb939 561 Pfam PF13672 Protein phosphatase 2C 34 193 1.2E-15 T 01-11-2018 CDA09_04570 c993b8e2ae89f268d16598bda2bfb939 561 SMART SM00220 273 522 8.3E-13 T 01-11-2018 IPR000719 Protein kinase domain GO:0004672|GO:0005524|GO:0006468 CDA09_04570 c993b8e2ae89f268d16598bda2bfb939 561 SUPERFAMILY SSF81606 4 233 3.27E-54 T 01-11-2018 IPR036457 PPM-type phosphatase domain superfamily KEGG: 04658+3.1.3.16|KEGG: 04660+3.1.3.16 CDA09_04570 c993b8e2ae89f268d16598bda2bfb939 561 SUPERFAMILY SSF56112 259 514 9.45E-46 T 01-11-2018 IPR011009 Protein kinase-like domain superfamily CDA09_04570 c993b8e2ae89f268d16598bda2bfb939 561 SMART SM00332 2 230 7.5E-15 T 01-11-2018 IPR001932 PPM-type phosphatase domain GO:0003824 KEGG: 04658+3.1.3.16|KEGG: 04660+3.1.3.16 CDA09_04570 c993b8e2ae89f268d16598bda2bfb939 561 SMART SM00331 18 232 4.2E-22 T 01-11-2018 IPR001932 PPM-type phosphatase domain GO:0003824 KEGG: 04658+3.1.3.16|KEGG: 04660+3.1.3.16 CDA09_04570 c993b8e2ae89f268d16598bda2bfb939 561 Gene3D G3DSA:1.10.510.10 257 524 1.6E-40 T 01-11-2018 CDA09_04570 c993b8e2ae89f268d16598bda2bfb939 561 Pfam PF00069 Protein kinase domain 280 462 2.3E-29 T 01-11-2018 IPR000719 Protein kinase domain GO:0004672|GO:0005524|GO:0006468 CDA09_04570 c993b8e2ae89f268d16598bda2bfb939 561 Gene3D G3DSA:3.60.40.10 1 235 8.2E-52 T 01-11-2018 IPR036457 PPM-type phosphatase domain superfamily KEGG: 04658+3.1.3.16|KEGG: 04660+3.1.3.16 CDA09_22725 7a796c18ff29eeb247feb8a091a58df5 525 TIGRFAM TIGR02278 PaaN-DH: phenylacetic acid degradation protein paaN 4 517 6.1E-175 T 01-11-2018 IPR011966 Phenylacetic acid degradation protein PaaN KEGG: 00360+3.3.2.12+1.2.1.91 CDA09_22725 7a796c18ff29eeb247feb8a091a58df5 525 Gene3D G3DSA:3.40.309.10 258 475 8.1E-152 T 01-11-2018 IPR016163 Aldehyde dehydrogenase, C-terminal GO:0016491|GO:0016620|GO:0055114 CDA09_22725 7a796c18ff29eeb247feb8a091a58df5 525 SUPERFAMILY SSF53720 5 499 3.93E-77 T 01-11-2018 IPR016161 Aldehyde/histidinol dehydrogenase GO:0016491|GO:0055114 CDA09_22725 7a796c18ff29eeb247feb8a091a58df5 525 Pfam PF00171 Aldehyde dehydrogenase family 11 446 2.5E-61 T 01-11-2018 IPR015590 Aldehyde dehydrogenase domain GO:0016491|GO:0055114 CDA09_22725 7a796c18ff29eeb247feb8a091a58df5 525 Gene3D G3DSA:3.40.605.10 9 487 8.1E-152 T 01-11-2018 IPR016162 Aldehyde dehydrogenase, N-terminal GO:0016491|GO:0055114 CDA09_15980 cfd0384b457e998488b16201645d9f7b 105 Gene3D G3DSA:2.40.128.200 28 105 2.0E-8 T 01-11-2018 IPR036328 C-type lysozyme inhibitor superfamily CDA09_15980 cfd0384b457e998488b16201645d9f7b 105 SUPERFAMILY SSF141488 30 102 6.41E-6 T 01-11-2018 IPR036328 C-type lysozyme inhibitor superfamily CDA09_15980 cfd0384b457e998488b16201645d9f7b 105 Pfam PF09864 Membrane-bound lysozyme-inhibitor of c-type lysozyme 34 93 8.0E-6 T 01-11-2018 IPR018660 C-type lysozyme inhibitor CDA09_17735 f8312dfbf8b43079699fca0aa20c0dee 265 PRINTS PR00377 Inositol monophosphatase superfamily signature 42 62 1.2E-15 T 01-11-2018 IPR000760 Inositol monophosphatase-like GO:0046854 CDA09_17735 f8312dfbf8b43079699fca0aa20c0dee 265 PRINTS PR00377 Inositol monophosphatase superfamily signature 180 201 1.2E-15 T 01-11-2018 IPR000760 Inositol monophosphatase-like GO:0046854 CDA09_17735 f8312dfbf8b43079699fca0aa20c0dee 265 PRINTS PR00377 Inositol monophosphatase superfamily signature 212 236 1.2E-15 T 01-11-2018 IPR000760 Inositol monophosphatase-like GO:0046854 CDA09_17735 f8312dfbf8b43079699fca0aa20c0dee 265 PRINTS PR00377 Inositol monophosphatase superfamily signature 87 103 1.2E-15 T 01-11-2018 IPR000760 Inositol monophosphatase-like GO:0046854 CDA09_17735 f8312dfbf8b43079699fca0aa20c0dee 265 PRINTS PR00377 Inositol monophosphatase superfamily signature 64 80 1.2E-15 T 01-11-2018 IPR000760 Inositol monophosphatase-like GO:0046854 CDA09_17735 f8312dfbf8b43079699fca0aa20c0dee 265 ProSitePatterns PS00629 Inositol monophosphatase family signature 1. 87 100 - T 01-11-2018 IPR020583 Inositol monophosphatase, metal-binding site CDA09_17735 f8312dfbf8b43079699fca0aa20c0dee 265 TIGRFAM TIGR01331 bisphos_cysQ: 3'(2'),5'-bisphosphate nucleotidase 10 253 5.8E-86 T 01-11-2018 IPR006240 3'(2'),5'-bisphosphate nucleotidase CysQ GO:0000287|GO:0006790|GO:0008441 KEGG: 00920+3.1.3.7 CDA09_17735 f8312dfbf8b43079699fca0aa20c0dee 265 Pfam PF00459 Inositol monophosphatase family 12 250 3.9E-54 T 01-11-2018 IPR000760 Inositol monophosphatase-like GO:0046854 CDA09_17735 f8312dfbf8b43079699fca0aa20c0dee 265 ProSitePatterns PS00630 Inositol monophosphatase family signature 2. 215 229 - T 01-11-2018 IPR020550 Inositol monophosphatase, conserved site GO:0046854 CDA09_17735 f8312dfbf8b43079699fca0aa20c0dee 265 Gene3D G3DSA:3.40.190.80 156 257 3.2E-31 T 01-11-2018 CDA09_17735 f8312dfbf8b43079699fca0aa20c0dee 265 Gene3D G3DSA:3.30.540.10 6 151 6.8E-43 T 01-11-2018 CDA09_17735 f8312dfbf8b43079699fca0aa20c0dee 265 Hamap MF_02095 3'(2'),5'-bisphosphate nucleotidase CysQ [cysQ]. 10 256 40.578 T 01-11-2018 IPR006240 3'(2'),5'-bisphosphate nucleotidase CysQ GO:0000287|GO:0006790|GO:0008441 KEGG: 00920+3.1.3.7 CDA09_17735 f8312dfbf8b43079699fca0aa20c0dee 265 SUPERFAMILY SSF56655 7 252 4.06E-72 T 01-11-2018 CDA09_05430 2bd88ede6d7368059bf8a5de95359eb3 150 SMART SM00855 2 106 2.3E-6 T 01-11-2018 IPR013078 Histidine phosphatase superfamily, clade-1 CDA09_05430 2bd88ede6d7368059bf8a5de95359eb3 150 PIRSF PIRSF000709 2 70 3.9E-4 T 01-11-2018 CDA09_05430 2bd88ede6d7368059bf8a5de95359eb3 150 Gene3D G3DSA:3.40.50.1240 1 143 5.2E-27 T 01-11-2018 IPR029033 Histidine phosphatase superfamily CDA09_05430 2bd88ede6d7368059bf8a5de95359eb3 150 SUPERFAMILY SSF53254 3 130 2.09E-19 T 01-11-2018 IPR029033 Histidine phosphatase superfamily CDA09_05430 2bd88ede6d7368059bf8a5de95359eb3 150 TIGRFAM TIGR00249 sixA: phosphohistidine phosphatase SixA 1 120 1.4E-21 T 01-11-2018 IPR004449 Phosphohistidine phosphatase SixA GO:0005737|GO:0006464|GO:0101006 CDA09_05430 2bd88ede6d7368059bf8a5de95359eb3 150 Pfam PF00300 Histidine phosphatase superfamily (branch 1) 3 69 1.3E-9 T 01-11-2018 IPR013078 Histidine phosphatase superfamily, clade-1 CDA09_19875 eeab76077a975742400c4e4755fbe69d 359 Gene3D G3DSA:1.10.760.10 256 356 2.4E-25 T 01-11-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 CDA09_19875 eeab76077a975742400c4e4755fbe69d 359 Pfam PF02630 SCO1/SenC 85 193 5.5E-19 T 01-11-2018 IPR003782 Copper chaperone SCO1/SenC Reactome: R-HSA-5628897|Reactome: R-HSA-611105 CDA09_19875 eeab76077a975742400c4e4755fbe69d 359 SUPERFAMILY SSF52833 80 218 2.3E-33 T 01-11-2018 IPR036249 Thioredoxin-like superfamily CDA09_19875 eeab76077a975742400c4e4755fbe69d 359 Gene3D G3DSA:3.40.30.10 78 235 6.3E-37 T 01-11-2018 CDA09_19875 eeab76077a975742400c4e4755fbe69d 359 SUPERFAMILY SSF46626 252 346 3.84E-17 T 01-11-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 CDA09_19875 eeab76077a975742400c4e4755fbe69d 359 Pfam PF00034 Cytochrome c 259 345 9.1E-10 T 01-11-2018 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 Reactome: R-HSA-111457|Reactome: R-HSA-111458|Reactome: R-HSA-111459|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 CDA09_01355 a25af9a3bc46c3b55e6bbf4f9fbaaad9 474 Gene3D G3DSA:1.10.10.60 397 451 3.4E-11 T 01-11-2018 CDA09_01355 a25af9a3bc46c3b55e6bbf4f9fbaaad9 474 Pfam PF00072 Response regulator receiver domain 3 112 2.2E-28 T 01-11-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 CDA09_01355 a25af9a3bc46c3b55e6bbf4f9fbaaad9 474 SUPERFAMILY SSF52540 143 383 3.73E-65 T 01-11-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CDA09_01355 a25af9a3bc46c3b55e6bbf4f9fbaaad9 474 Pfam PF00158 Sigma-54 interaction domain 142 306 3.0E-65 T 01-11-2018 IPR002078 RNA polymerase sigma factor 54 interaction domain GO:0005524|GO:0006355|GO:0008134 CDA09_01355 a25af9a3bc46c3b55e6bbf4f9fbaaad9 474 SMART SM00448 1 112 1.0E-35 T 01-11-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 CDA09_01355 a25af9a3bc46c3b55e6bbf4f9fbaaad9 474 Pfam PF02954 Bacterial regulatory protein, Fis family 409 449 1.9E-8 T 01-11-2018 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 CDA09_01355 a25af9a3bc46c3b55e6bbf4f9fbaaad9 474 Gene3D G3DSA:3.40.50.2300 1 130 2.3E-35 T 01-11-2018 CDA09_01355 a25af9a3bc46c3b55e6bbf4f9fbaaad9 474 SMART SM00382 159 311 5.2E-11 T 01-11-2018 IPR003593 AAA+ ATPase domain CDA09_01355 a25af9a3bc46c3b55e6bbf4f9fbaaad9 474 SUPERFAMILY SSF46689 353 449 7.53E-14 T 01-11-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 CDA09_01355 a25af9a3bc46c3b55e6bbf4f9fbaaad9 474 ProSitePatterns PS00675 Sigma-54 interaction domain ATP-binding region A signature. 163 176 - T 01-11-2018 IPR025662 Sigma-54 interaction domain, ATP-binding site 1 CDA09_01355 a25af9a3bc46c3b55e6bbf4f9fbaaad9 474 SUPERFAMILY SSF52172 1 183 2.56E-41 T 01-11-2018 IPR011006 CheY-like superfamily CDA09_01355 a25af9a3bc46c3b55e6bbf4f9fbaaad9 474 Gene3D G3DSA:3.40.50.300 131 309 9.0E-61 T 01-11-2018 CDA09_01355 a25af9a3bc46c3b55e6bbf4f9fbaaad9 474 Gene3D G3DSA:1.10.8.60 310 390 3.7E-21 T 01-11-2018 CDA09_04725 d0fcafe584c2cf2bfcbacff95a5eac33 338 Gene3D G3DSA:3.90.1200.10 121 323 3.0E-42 T 01-11-2018 CDA09_04725 d0fcafe584c2cf2bfcbacff95a5eac33 338 Gene3D G3DSA:3.30.200.20 4 114 3.4E-14 T 01-11-2018 CDA09_04725 d0fcafe584c2cf2bfcbacff95a5eac33 338 SUPERFAMILY SSF56112 9 317 2.48E-42 T 01-11-2018 IPR011009 Protein kinase-like domain superfamily CDA09_04725 d0fcafe584c2cf2bfcbacff95a5eac33 338 Pfam PF01636 Phosphotransferase enzyme family 28 267 1.1E-33 T 01-11-2018 IPR002575 Aminoglycoside phosphotransferase CDA09_13005 9eea6fc103aa95c72d0d0fbf239be7a8 448 Pfam PF00990 Diguanylate cyclase, GGDEF domain 289 442 2.1E-49 T 01-11-2018 IPR000160 GGDEF domain CDA09_13005 9eea6fc103aa95c72d0d0fbf239be7a8 448 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 285 442 1.5E-46 T 01-11-2018 IPR000160 GGDEF domain CDA09_13005 9eea6fc103aa95c72d0d0fbf239be7a8 448 Gene3D G3DSA:3.30.450.20 7 117 2.0E-21 T 01-11-2018 CDA09_13005 9eea6fc103aa95c72d0d0fbf239be7a8 448 SUPERFAMILY SSF55073 294 443 2.88E-50 T 01-11-2018 IPR029787 Nucleotide cyclase CDA09_13005 9eea6fc103aa95c72d0d0fbf239be7a8 448 Gene3D G3DSA:3.30.450.40 118 286 2.1E-21 T 01-11-2018 IPR029016 GAF-like domain superfamily CDA09_13005 9eea6fc103aa95c72d0d0fbf239be7a8 448 Pfam PF13185 GAF domain 139 277 8.0E-11 T 01-11-2018 IPR003018 GAF domain GO:0005515 CDA09_13005 9eea6fc103aa95c72d0d0fbf239be7a8 448 SUPERFAMILY SSF55781 140 289 5.89E-19 T 01-11-2018 CDA09_13005 9eea6fc103aa95c72d0d0fbf239be7a8 448 Gene3D G3DSA:3.30.70.270 287 446 4.1E-58 T 01-11-2018 CDA09_13005 9eea6fc103aa95c72d0d0fbf239be7a8 448 SMART SM00267 278 447 3.8E-60 T 01-11-2018 IPR000160 GGDEF domain CDA09_13005 9eea6fc103aa95c72d0d0fbf239be7a8 448 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 8 122 2.6E-17 T 01-11-2018 IPR000014 PAS domain CDA09_13005 9eea6fc103aa95c72d0d0fbf239be7a8 448 Pfam PF08447 PAS fold 30 91 5.9E-11 T 01-11-2018 IPR013655 PAS fold-3 GO:0005515 CDA09_13005 9eea6fc103aa95c72d0d0fbf239be7a8 448 SMART SM00065 140 286 4.2E-4 T 01-11-2018 IPR003018 GAF domain GO:0005515 CDA09_13005 9eea6fc103aa95c72d0d0fbf239be7a8 448 SMART SM00091 8 74 9.8E-11 T 01-11-2018 IPR000014 PAS domain CDA09_13005 9eea6fc103aa95c72d0d0fbf239be7a8 448 SUPERFAMILY SSF55785 14 121 1.44E-22 T 01-11-2018 IPR035965 PAS domain superfamily CDA09_17535 14efd1799771278a0bc5fef4c7cba456 440 PIRSF PIRSF000124 1 439 4.5E-143 T 01-11-2018 IPR017476 UDP-glucose/GDP-mannose dehydrogenase GO:0016616|GO:0055114 Reactome: R-HSA-173599 CDA09_17535 14efd1799771278a0bc5fef4c7cba456 440 SUPERFAMILY SSF48179 204 301 3.57E-31 T 01-11-2018 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily GO:0055114 CDA09_17535 14efd1799771278a0bc5fef4c7cba456 440 Pfam PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain 320 423 4.0E-32 T 01-11-2018 IPR014027 UDP-glucose/GDP-mannose dehydrogenase, C-terminal GO:0016616|GO:0051287|GO:0055114 Reactome: R-HSA-173599 CDA09_17535 14efd1799771278a0bc5fef4c7cba456 440 SUPERFAMILY SSF52413 305 434 3.4E-40 T 01-11-2018 IPR036220 UDP-glucose/GDP-mannose dehydrogenase, C-terminal domain superfamily Reactome: R-HSA-173599 CDA09_17535 14efd1799771278a0bc5fef4c7cba456 440 Gene3D G3DSA:3.40.50.720 1 202 1.2E-79 T 01-11-2018 CDA09_17535 14efd1799771278a0bc5fef4c7cba456 440 PIRSF PIRSF500134 1 440 4.8E-187 T 01-11-2018 IPR028357 UDP-glucose 6-dehydrogenase, bacterial type GO:0000271|GO:0003979 KEGG: 00040+1.1.1.22|KEGG: 00053+1.1.1.22|KEGG: 00520+1.1.1.22|MetaCyc: PWY-7346|MetaCyc: PWY-7820 CDA09_17535 14efd1799771278a0bc5fef4c7cba456 440 Gene3D G3DSA:1.20.5.100 203 233 2.3E-18 T 01-11-2018 CDA09_17535 14efd1799771278a0bc5fef4c7cba456 440 TIGRFAM TIGR03026 NDP-sugDHase: nucleotide sugar dehydrogenase 1 420 6.1E-132 T 01-11-2018 IPR017476 UDP-glucose/GDP-mannose dehydrogenase GO:0016616|GO:0055114 Reactome: R-HSA-173599 CDA09_17535 14efd1799771278a0bc5fef4c7cba456 440 SUPERFAMILY SSF51735 1 194 2.1E-54 T 01-11-2018 IPR036291 NAD(P)-binding domain superfamily CDA09_17535 14efd1799771278a0bc5fef4c7cba456 440 Pfam PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain 1 186 4.2E-62 T 01-11-2018 IPR001732 UDP-glucose/GDP-mannose dehydrogenase, N-terminal GO:0016616|GO:0051287|GO:0055114 Reactome: R-HSA-173599 CDA09_17535 14efd1799771278a0bc5fef4c7cba456 440 SMART SM00984 320 424 5.9E-53 T 01-11-2018 IPR014027 UDP-glucose/GDP-mannose dehydrogenase, C-terminal GO:0016616|GO:0051287|GO:0055114 Reactome: R-HSA-173599 CDA09_17535 14efd1799771278a0bc5fef4c7cba456 440 Gene3D G3DSA:3.40.50.720 235 440 1.3E-78 T 01-11-2018 CDA09_17535 14efd1799771278a0bc5fef4c7cba456 440 Pfam PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain 204 296 6.7E-36 T 01-11-2018 IPR014026 UDP-glucose/GDP-mannose dehydrogenase, dimerisation GO:0016616|GO:0051287|GO:0055114 Reactome: R-HSA-173599 CDA09_02170 25795827c0c3ebc2a0e64943e7ef1e74 249 Gene3D G3DSA:3.40.50.720 1 232 1.0E-54 T 01-11-2018 CDA09_02170 25795827c0c3ebc2a0e64943e7ef1e74 249 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 69 80 6.5E-8 T 01-11-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CDA09_02170 25795827c0c3ebc2a0e64943e7ef1e74 249 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 143 162 6.5E-8 T 01-11-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CDA09_02170 25795827c0c3ebc2a0e64943e7ef1e74 249 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 123 131 6.5E-8 T 01-11-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CDA09_02170 25795827c0c3ebc2a0e64943e7ef1e74 249 SUPERFAMILY SSF51735 2 238 1.92E-58 T 01-11-2018 IPR036291 NAD(P)-binding domain superfamily CDA09_02170 25795827c0c3ebc2a0e64943e7ef1e74 249 Pfam PF00106 short chain dehydrogenase 2 182 9.3E-41 T 01-11-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CDA09_02170 25795827c0c3ebc2a0e64943e7ef1e74 249 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 130 158 - T 01-11-2018 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 CDA09_02170 25795827c0c3ebc2a0e64943e7ef1e74 249 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 164 181 2.8E-15 T 01-11-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CDA09_02170 25795827c0c3ebc2a0e64943e7ef1e74 249 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 143 162 2.8E-15 T 01-11-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CDA09_02170 25795827c0c3ebc2a0e64943e7ef1e74 249 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 43 60 2.8E-15 T 01-11-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CDA09_02170 25795827c0c3ebc2a0e64943e7ef1e74 249 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 117 133 2.8E-15 T 01-11-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CDA09_13215 8d3d8c99736fc20e061b26723bbe1c8d 115 Gene3D G3DSA:1.20.1300.10 1 115 3.7E-31 T 01-11-2018 IPR034804 Fumarate reductase/succinate dehydrogenase, transmembrane subunit GO:0016020 Reactome: R-HSA-611105|Reactome: R-HSA-71403 CDA09_13215 8d3d8c99736fc20e061b26723bbe1c8d 115 Pfam PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit 7 103 1.6E-13 T 01-11-2018 IPR000701 Succinate dehydrogenase/fumarate reductase type B, transmembrane subunit GO:0016627 Reactome: R-HSA-611105|Reactome: R-HSA-71403 CDA09_13215 8d3d8c99736fc20e061b26723bbe1c8d 115 SUPERFAMILY SSF81343 4 115 5.4E-28 T 01-11-2018 IPR034804 Fumarate reductase/succinate dehydrogenase, transmembrane subunit GO:0016020 Reactome: R-HSA-611105|Reactome: R-HSA-71403 CDA09_13215 8d3d8c99736fc20e061b26723bbe1c8d 115 TIGRFAM TIGR02968 succ_dehyd_anc: succinate dehydrogenase, hydrophobic membrane anchor protein 9 113 1.1E-35 T 01-11-2018 IPR014312 Succinate dehydrogenase, hydrophobic membrane anchor GO:0000104|GO:0006099|GO:0016021|GO:0020037 CDA09_13215 8d3d8c99736fc20e061b26723bbe1c8d 115 PIRSF PIRSF000169 1 115 1.3E-36 T 01-11-2018 IPR014312 Succinate dehydrogenase, hydrophobic membrane anchor GO:0000104|GO:0006099|GO:0016021|GO:0020037 CDA09_03300 a7739470fc7fae81384f0fee15bd173d 81 SUPERFAMILY SSF116842 4 70 4.05E-20 T 01-11-2018 CDA09_03300 a7739470fc7fae81384f0fee15bd173d 81 Pfam PF02609 Exonuclease VII small subunit 11 60 3.2E-20 T 01-11-2018 IPR003761 Exonuclease VII, small subunit GO:0006308|GO:0008855|GO:0009318 CDA09_03300 a7739470fc7fae81384f0fee15bd173d 81 Gene3D G3DSA:1.10.287.1040 4 77 1.4E-24 T 01-11-2018 IPR037004 Exonuclease VII, small subunit superfamily GO:0006308|GO:0008855|GO:0009318 CDA09_03300 a7739470fc7fae81384f0fee15bd173d 81 TIGRFAM TIGR01280 xseB: exodeoxyribonuclease VII, small subunit 10 64 5.6E-23 T 01-11-2018 IPR003761 Exonuclease VII, small subunit GO:0006308|GO:0008855|GO:0009318 CDA09_03300 a7739470fc7fae81384f0fee15bd173d 81 Hamap MF_00337 Exodeoxyribonuclease 7 small subunit [xseB]. 10 70 14.964 T 01-11-2018 IPR003761 Exonuclease VII, small subunit GO:0006308|GO:0008855|GO:0009318 CDA09_03300 a7739470fc7fae81384f0fee15bd173d 81 ProDom PD028235 EXONUCLEASE SMALL SUBUNIT VII EXODEOXYRIBONUCLEASE HYDROLASE NUCLEASE PROBABLE VII SIMILAR 5 51 7.0E-8 T 01-11-2018 IPR003761 Exonuclease VII, small subunit GO:0006308|GO:0008855|GO:0009318 CDA09_03300 a7739470fc7fae81384f0fee15bd173d 81 PIRSF PIRSF006488 1 81 2.8E-22 T 01-11-2018 IPR003761 Exonuclease VII, small subunit GO:0006308|GO:0008855|GO:0009318 CDA09_03630 b12371cf8485843d8c6457ac5768712a 173 PIRSF PIRSF028301 2 172 3.3E-61 T 01-11-2018 IPR008312 Type VI secretion system, VipA, VC_A0107 or Hcp2 CDA09_03630 b12371cf8485843d8c6457ac5768712a 173 Pfam PF05591 Type VI secretion system, VipA, VC_A0107 or Hcp2 12 160 2.2E-56 T 01-11-2018 IPR008312 Type VI secretion system, VipA, VC_A0107 or Hcp2 CDA09_03630 b12371cf8485843d8c6457ac5768712a 173 TIGRFAM TIGR03358 VI_chp_5: type VI secretion protein, VC_A0107 family 8 160 9.2E-55 T 01-11-2018 IPR008312 Type VI secretion system, VipA, VC_A0107 or Hcp2 CDA09_18855 a0cb22df4ff1a4aeeca59c3f352e4cc3 147 Gene3D G3DSA:1.10.10.10 3 78 1.7E-13 T 01-11-2018 IPR036388 Winged helix-like DNA-binding domain superfamily CDA09_18855 a0cb22df4ff1a4aeeca59c3f352e4cc3 147 Pfam PF01475 Ferric uptake regulator family 16 106 3.8E-12 T 01-11-2018 IPR002481 Ferric-uptake regulator GO:0003700|GO:0006355 CDA09_18855 a0cb22df4ff1a4aeeca59c3f352e4cc3 147 SUPERFAMILY SSF46785 10 138 2.2E-25 T 01-11-2018 IPR036390 Winged helix DNA-binding domain superfamily CDA09_16855 235449164b91f5e38ef3f4d43557dbed 476 Pfam PF11614 IG-like fold at C-terminal of FixG, putative oxidoreductase 359 475 5.8E-31 T 01-11-2018 IPR032879 FixG, C-terminal immunoglobulin-like domain CDA09_16855 235449164b91f5e38ef3f4d43557dbed 476 SUPERFAMILY SSF54862 103 365 4.19E-34 T 01-11-2018 CDA09_16855 235449164b91f5e38ef3f4d43557dbed 476 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 270 281 - T 01-11-2018 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site CDA09_16855 235449164b91f5e38ef3f4d43557dbed 476 Pfam PF12801 4Fe-4S binding domain 94 134 6.2E-11 T 01-11-2018 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain CDA09_16855 235449164b91f5e38ef3f4d43557dbed 476 Pfam PF13746 4Fe-4S dicluster domain 217 322 2.0E-43 T 01-11-2018 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain CDA09_16855 235449164b91f5e38ef3f4d43557dbed 476 TIGRFAM TIGR02745 ccoG_rdxA_fixG: cytochrome c oxidase accessory protein CcoG 39 473 3.7E-155 T 01-11-2018 IPR014116 Cytochrome c oxidase cbb3 type, accessory protein FixG GO:0016021|GO:0055114 CDA09_16855 235449164b91f5e38ef3f4d43557dbed 476 Gene3D G3DSA:2.60.40.10 359 474 1.4E-25 T 01-11-2018 IPR013783 Immunoglobulin-like fold CDA09_01545 8690283c4f4c93933e778631c8cd0d9b 460 Gene3D G3DSA:3.30.70.270 144 315 2.8E-54 T 01-11-2018 CDA09_01545 8690283c4f4c93933e778631c8cd0d9b 460 SMART SM00267 147 315 2.4E-57 T 01-11-2018 IPR000160 GGDEF domain CDA09_01545 8690283c4f4c93933e778631c8cd0d9b 460 SUPERFAMILY SSF55073 163 314 2.2E-46 T 01-11-2018 IPR029787 Nucleotide cyclase CDA09_01545 8690283c4f4c93933e778631c8cd0d9b 460 Gene3D G3DSA:3.30.450.20 14 130 8.8E-8 T 01-11-2018 CDA09_01545 8690283c4f4c93933e778631c8cd0d9b 460 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 154 314 6.2E-47 T 01-11-2018 IPR000160 GGDEF domain CDA09_01545 8690283c4f4c93933e778631c8cd0d9b 460 Gene3D G3DSA:1.20.120.50 331 460 5.0E-25 T 01-11-2018 IPR035938 Hemerythrin-like superfamily CDA09_01545 8690283c4f4c93933e778631c8cd0d9b 460 SUPERFAMILY SSF47188 334 460 1.44E-23 T 01-11-2018 IPR035938 Hemerythrin-like superfamily CDA09_01545 8690283c4f4c93933e778631c8cd0d9b 460 SUPERFAMILY SSF55785 22 67 1.42E-7 T 01-11-2018 IPR035965 PAS domain superfamily CDA09_01545 8690283c4f4c93933e778631c8cd0d9b 460 Pfam PF08448 PAS fold 25 129 4.0E-8 T 01-11-2018 IPR013656 PAS fold-4 CDA09_01545 8690283c4f4c93933e778631c8cd0d9b 460 TIGRFAM TIGR02481 hemeryth_dom: hemerythrin-like metal-binding domain 336 460 6.7E-25 T 01-11-2018 IPR012827 Haemerythrin, metal-binding domain GO:0046872 CDA09_01545 8690283c4f4c93933e778631c8cd0d9b 460 Pfam PF00990 Diguanylate cyclase, GGDEF domain 158 311 5.3E-43 T 01-11-2018 IPR000160 GGDEF domain CDA09_08450 663641dfea39be97dac21125c4811648 473 SMART SM00382 42 183 1.1E-4 T 01-11-2018 IPR003593 AAA+ ATPase domain CDA09_08450 663641dfea39be97dac21125c4811648 473 Gene3D G3DSA:1.10.8.300 223 283 7.4E-13 T 01-11-2018 CDA09_08450 663641dfea39be97dac21125c4811648 473 SUPERFAMILY SSF52540 18 195 1.82E-20 T 01-11-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CDA09_08450 663641dfea39be97dac21125c4811648 473 Gene3D G3DSA:3.40.50.300 7 197 2.7E-49 T 01-11-2018 CDA09_08450 663641dfea39be97dac21125c4811648 473 Pfam PF07728 AAA domain (dynein-related subfamily) 45 173 2.6E-23 T 01-11-2018 IPR011704 ATPase, dynein-related, AAA domain GO:0005524|GO:0016887 CDA09_21370 d54f08a8ba6d97a43e16efaf34d50277 216 SUPERFAMILY SSF53850 11 211 2.31E-23 T 01-11-2018 CDA09_21370 d54f08a8ba6d97a43e16efaf34d50277 216 Gene3D G3DSA:3.40.190.290 12 214 2.0E-20 T 01-11-2018 CDA09_21370 d54f08a8ba6d97a43e16efaf34d50277 216 Pfam PF03466 LysR substrate binding domain 10 207 1.0E-22 T 01-11-2018 IPR005119 LysR, substrate-binding CDA09_13530 f61a149331549a430caa8126b37863c7 527 Pfam PF01593 Flavin containing amine oxidoreductase 16 514 8.0E-15 T 01-11-2018 IPR002937 Amine oxidase GO:0016491|GO:0055114 CDA09_13530 f61a149331549a430caa8126b37863c7 527 Gene3D G3DSA:3.50.50.60 217 326 3.2E-14 T 01-11-2018 IPR036188 FAD/NAD(P)-binding domain superfamily CDA09_13530 f61a149331549a430caa8126b37863c7 527 SUPERFAMILY SSF51905 1 517 6.03E-51 T 01-11-2018 IPR036188 FAD/NAD(P)-binding domain superfamily CDA09_13530 f61a149331549a430caa8126b37863c7 527 Gene3D G3DSA:3.50.50.60 1 152 1.3E-13 T 01-11-2018 IPR036188 FAD/NAD(P)-binding domain superfamily CDA09_13530 f61a149331549a430caa8126b37863c7 527 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 6 28 8.2E-5 T 01-11-2018 CDA09_13530 f61a149331549a430caa8126b37863c7 527 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 380 396 8.2E-5 T 01-11-2018 CDA09_13300 8bc57b283324eb7dd7ca562737e4a91c 183 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 143 154 - T 01-11-2018 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site CDA09_13300 8bc57b283324eb7dd7ca562737e4a91c 183 Hamap MF_00463 Ion-translocating oxidoreductase complex subunit B [rsxB]. 1 165 24.985 T 01-11-2018 IPR010207 Ion-translocating oxidoreductase complex, RnfB/RsxB GO:0009055|GO:0051536 CDA09_13300 8bc57b283324eb7dd7ca562737e4a91c 183 Pfam PF04060 Putative Fe-S cluster 41 73 1.1E-16 T 01-11-2018 IPR007202 4Fe-4S domain GO:0051536 CDA09_13300 8bc57b283324eb7dd7ca562737e4a91c 183 Pfam PF14697 4Fe-4S dicluster domain 106 160 4.2E-17 T 01-11-2018 CDA09_13300 8bc57b283324eb7dd7ca562737e4a91c 183 Gene3D G3DSA:1.10.15.40 36 80 1.2E-9 T 01-11-2018 CDA09_13300 8bc57b283324eb7dd7ca562737e4a91c 183 TIGRFAM TIGR01944 rnfB: electron transport complex, RnfABCDGE type, B subunit 2 181 5.8E-82 T 01-11-2018 IPR010207 Ion-translocating oxidoreductase complex, RnfB/RsxB GO:0009055|GO:0051536 CDA09_13300 8bc57b283324eb7dd7ca562737e4a91c 183 PIRSF PIRSF005784 1 183 3.1E-86 T 01-11-2018 IPR016463 Electron transport complex, RnfB/RsxB, Proteobacteria GO:0005886|GO:0022900|GO:0051536 CDA09_13300 8bc57b283324eb7dd7ca562737e4a91c 183 Gene3D G3DSA:3.30.70.20 81 176 7.5E-21 T 01-11-2018 CDA09_13300 8bc57b283324eb7dd7ca562737e4a91c 183 SUPERFAMILY SSF54862 35 172 4.37E-31 T 01-11-2018 CDA09_01220 6dce3de2701bb87b88140d8074289db8 477 SUPERFAMILY SSF46785 3 74 2.28E-18 T 01-11-2018 IPR036390 Winged helix DNA-binding domain superfamily CDA09_01220 6dce3de2701bb87b88140d8074289db8 477 Gene3D G3DSA:3.40.640.10 149 367 2.0E-89 T 01-11-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 CDA09_01220 6dce3de2701bb87b88140d8074289db8 477 Pfam PF00392 Bacterial regulatory proteins, gntR family 8 71 1.5E-12 T 01-11-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 CDA09_01220 6dce3de2701bb87b88140d8074289db8 477 SUPERFAMILY SSF53383 101 474 2.2E-82 T 01-11-2018 IPR015424 Pyridoxal phosphate-dependent transferase CDA09_01220 6dce3de2701bb87b88140d8074289db8 477 Gene3D G3DSA:3.90.1150.10 101 471 2.0E-89 T 01-11-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 CDA09_01220 6dce3de2701bb87b88140d8074289db8 477 Gene3D G3DSA:1.10.10.10 1 72 1.4E-19 T 01-11-2018 IPR036388 Winged helix-like DNA-binding domain superfamily CDA09_01220 6dce3de2701bb87b88140d8074289db8 477 SMART SM00345 12 71 1.3E-14 T 01-11-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 CDA09_01220 6dce3de2701bb87b88140d8074289db8 477 Pfam PF00155 Aminotransferase class I and II 154 442 2.5E-25 T 01-11-2018 IPR004839 Aminotransferase, class I/classII GO:0009058|GO:0030170 CDA09_16490 5985fa9a0fb23affc8a078b1a51b5413 555 ProSitePatterns PS00187 Thiamine pyrophosphate enzymes signature. 420 439 - T 01-11-2018 IPR000399 TPP-binding enzyme, conserved site GO:0000287|GO:0030976 CDA09_16490 5985fa9a0fb23affc8a078b1a51b5413 555 SUPERFAMILY SSF52467 185 351 4.48E-57 T 01-11-2018 IPR029035 DHS-like NAD/FAD-binding domain superfamily CDA09_16490 5985fa9a0fb23affc8a078b1a51b5413 555 SUPERFAMILY SSF52518 2 183 1.85E-62 T 01-11-2018 IPR029061 Thiamin diphosphate-binding fold CDA09_16490 5985fa9a0fb23affc8a078b1a51b5413 555 TIGRFAM TIGR00118 acolac_lg: acetolactate synthase, large subunit, biosynthetic type 4 554 1.1E-209 T 01-11-2018 IPR012846 Acetolactate synthase, large subunit, biosynthetic GO:0000287|GO:0003984|GO:0009082|GO:0030976|GO:0050660 KEGG: 00290+2.2.1.6|KEGG: 00650+2.2.1.6|KEGG: 00660+2.2.1.6|KEGG: 00770+2.2.1.6|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-5938|MetaCyc: PWY-5939|MetaCyc: PWY-6389|MetaCyc: PWY-7111 CDA09_16490 5985fa9a0fb23affc8a078b1a51b5413 555 Gene3D G3DSA:3.40.50.970 355 554 1.3E-67 T 01-11-2018 CDA09_16490 5985fa9a0fb23affc8a078b1a51b5413 555 Gene3D G3DSA:3.40.50.970 1 181 7.7E-69 T 01-11-2018 CDA09_16490 5985fa9a0fb23affc8a078b1a51b5413 555 Pfam PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain 4 169 1.5E-58 T 01-11-2018 IPR012001 Thiamine pyrophosphate enzyme, N-terminal TPP-binding domain GO:0030976 CDA09_16490 5985fa9a0fb23affc8a078b1a51b5413 555 Pfam PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain 383 531 6.7E-51 T 01-11-2018 IPR011766 Thiamine pyrophosphate enzyme, C-terminal TPP-binding GO:0003824|GO:0030976 CDA09_16490 5985fa9a0fb23affc8a078b1a51b5413 555 Pfam PF00205 Thiamine pyrophosphate enzyme, central domain 192 326 1.7E-42 T 01-11-2018 IPR012000 Thiamine pyrophosphate enzyme, central domain GO:0000287|GO:0030976 CDA09_16490 5985fa9a0fb23affc8a078b1a51b5413 555 SUPERFAMILY SSF52518 360 553 1.79E-69 T 01-11-2018 IPR029061 Thiamin diphosphate-binding fold CDA09_16490 5985fa9a0fb23affc8a078b1a51b5413 555 Gene3D G3DSA:3.40.50.1220 186 350 1.1E-55 T 01-11-2018 CDA09_19695 ae51cc0054cdd047ac380f7841473df7 320 SUPERFAMILY SSF53850 25 261 2.82E-45 T 01-11-2018 CDA09_19695 ae51cc0054cdd047ac380f7841473df7 320 Gene3D G3DSA:3.40.190.10 28 305 2.0E-73 T 01-11-2018 CDA09_19695 ae51cc0054cdd047ac380f7841473df7 320 Pfam PF09084 NMT1/THI5 like 35 250 4.5E-24 T 01-11-2018 IPR015168 SsuA/THI5-like CDA09_19695 ae51cc0054cdd047ac380f7841473df7 320 Gene3D G3DSA:3.40.190.10 110 209 2.0E-73 T 01-11-2018 CDA09_19695 ae51cc0054cdd047ac380f7841473df7 320 TIGRFAM TIGR01728 SsuA_fam: ABC transporter, substrate-binding protein, aliphatic sulfonates family 27 313 1.7E-58 T 01-11-2018 IPR010067 Aliphatic sulfonates-binding protein GO:0016020|GO:0042626 CDA09_19695 ae51cc0054cdd047ac380f7841473df7 320 SMART SM00062 26 246 1.9E-8 T 01-11-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF CDA09_19695 ae51cc0054cdd047ac380f7841473df7 320 Gene3D G3DSA:1.10.8.450 241 273 2.0E-73 T 01-11-2018 CDA09_02795 56761c6b1e1d24e8f61c86db559b07f6 425 Gene3D G3DSA:1.10.8.260 291 346 6.2E-65 T 01-11-2018 IPR023166 HI0933-like insert domain superfamily CDA09_02795 56761c6b1e1d24e8f61c86db559b07f6 425 Gene3D G3DSA:3.50.50.60 7 414 6.2E-65 T 01-11-2018 IPR036188 FAD/NAD(P)-binding domain superfamily CDA09_02795 56761c6b1e1d24e8f61c86db559b07f6 425 Gene3D G3DSA:2.40.30.10 198 363 6.2E-65 T 01-11-2018 CDA09_02795 56761c6b1e1d24e8f61c86db559b07f6 425 PRINTS PR00419 Adrenodoxin reductase family signature 6 28 1.3E-7 T 01-11-2018 CDA09_02795 56761c6b1e1d24e8f61c86db559b07f6 425 PRINTS PR00419 Adrenodoxin reductase family signature 29 42 1.3E-7 T 01-11-2018 CDA09_02795 56761c6b1e1d24e8f61c86db559b07f6 425 Pfam PF03486 HI0933-like protein 6 415 6.4E-105 T 01-11-2018 CDA09_02795 56761c6b1e1d24e8f61c86db559b07f6 425 TIGRFAM TIGR03862 flavo_PP4765: flavoprotein, TIGR03862 family 27 422 3.1E-160 T 01-11-2018 IPR022460 Conserved hyptotheical protein CHP03862, flavoprotein, PP4765 CDA09_02795 56761c6b1e1d24e8f61c86db559b07f6 425 SUPERFAMILY SSF51905 5 421 1.13E-44 T 01-11-2018 IPR036188 FAD/NAD(P)-binding domain superfamily CDA09_02795 56761c6b1e1d24e8f61c86db559b07f6 425 SUPERFAMILY SSF160996 218 361 3.66E-7 T 01-11-2018 CDA09_02795 56761c6b1e1d24e8f61c86db559b07f6 425 TIGRFAM TIGR00275 TIGR00275: flavoprotein, HI0933 family 7 414 2.5E-81 T 01-11-2018 IPR004792 Conserved hypothetical protein CHP00275, flavoprotein HI0933-like CDA09_08630 bb1646591c907f63d597276abe418764 305 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 20 31 8.5E-7 T 01-11-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 CDA09_08630 bb1646591c907f63d597276abe418764 305 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 31 41 8.5E-7 T 01-11-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 CDA09_08630 bb1646591c907f63d597276abe418764 305 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 41 52 8.5E-7 T 01-11-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 CDA09_08630 bb1646591c907f63d597276abe418764 305 Gene3D G3DSA:3.40.190.10 164 269 5.4E-51 T 01-11-2018 CDA09_08630 bb1646591c907f63d597276abe418764 305 SUPERFAMILY SSF46785 4 85 1.14E-20 T 01-11-2018 IPR036390 Winged helix DNA-binding domain superfamily CDA09_08630 bb1646591c907f63d597276abe418764 305 Pfam PF03466 LysR substrate binding domain 90 293 1.5E-40 T 01-11-2018 IPR005119 LysR, substrate-binding CDA09_08630 bb1646591c907f63d597276abe418764 305 Gene3D G3DSA:1.10.10.10 3 92 1.7E-24 T 01-11-2018 IPR036388 Winged helix-like DNA-binding domain superfamily CDA09_08630 bb1646591c907f63d597276abe418764 305 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 5 64 5.6E-19 T 01-11-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 CDA09_08630 bb1646591c907f63d597276abe418764 305 SUPERFAMILY SSF53850 92 294 1.32E-38 T 01-11-2018 CDA09_08630 bb1646591c907f63d597276abe418764 305 Gene3D G3DSA:3.40.190.10 93 287 5.4E-51 T 01-11-2018 CDA09_01185 abc67abd123dc70cd0760b0beceb13da 164 Pfam PF14345 GDYXXLXY protein 18 151 2.2E-27 T 01-11-2018 IPR025833 GDYXXLXY protein CDA09_18305 6e73c8c4fcdc5c2d95e27c70443ad7a4 347 TIGRFAM TIGR02098 MJ0042_CXXC: MJ0042 family finger-like domain 1 37 2.1E-12 T 01-11-2018 IPR011723 Zinc finger/thioredoxin putative CDA09_18305 6e73c8c4fcdc5c2d95e27c70443ad7a4 347 Pfam PF11906 Protein of unknown function (DUF3426) 201 343 1.7E-41 T 01-11-2018 IPR021834 Protein of unknown function DUF3426 CDA09_18305 6e73c8c4fcdc5c2d95e27c70443ad7a4 347 Pfam PF13717 zinc-ribbon domain 1 31 5.8E-10 T 01-11-2018 IPR011723 Zinc finger/thioredoxin putative CDA09_08855 42fe4ab55aae4557f7521805a297f72f 386 Gene3D G3DSA:1.10.3210.10 175 383 3.5E-60 T 01-11-2018 CDA09_08855 42fe4ab55aae4557f7521805a297f72f 386 SMART SM00471 191 339 1.9E-6 T 01-11-2018 IPR003607 HD/PDEase domain CDA09_08855 42fe4ab55aae4557f7521805a297f72f 386 SMART SM00065 25 177 0.0081 T 01-11-2018 IPR003018 GAF domain GO:0005515 CDA09_08855 42fe4ab55aae4557f7521805a297f72f 386 SUPERFAMILY SSF109604 182 367 1.2E-31 T 01-11-2018 CDA09_08855 42fe4ab55aae4557f7521805a297f72f 386 SUPERFAMILY SSF55781 45 167 7.85E-12 T 01-11-2018 CDA09_08855 42fe4ab55aae4557f7521805a297f72f 386 Pfam PF01966 HD domain 197 329 2.5E-16 T 01-11-2018 IPR006674 HD domain CDA09_08855 42fe4ab55aae4557f7521805a297f72f 386 Gene3D G3DSA:3.30.450.40 23 173 3.2E-8 T 01-11-2018 IPR029016 GAF-like domain superfamily CDA09_21775 6d8a46484cbf4b02bd44a45db2297e1c 256 SUPERFAMILY SSF52096 8 256 6.52E-56 T 01-11-2018 IPR029045 ClpP/crotonase-like domain superfamily CDA09_21775 6d8a46484cbf4b02bd44a45db2297e1c 256 Gene3D G3DSA:1.10.12.10 198 256 4.5E-10 T 01-11-2018 IPR014748 Enoyl-CoA hydratase, C-terminal CDA09_21775 6d8a46484cbf4b02bd44a45db2297e1c 256 Pfam PF00378 Enoyl-CoA hydratase/isomerase 14 255 1.6E-38 T 01-11-2018 IPR001753 Enoyl-CoA hydratase/isomerase GO:0003824 CDA09_21775 6d8a46484cbf4b02bd44a45db2297e1c 256 TIGRFAM TIGR03189 dienoyl_CoA_hyt: cyclohexa-1,5-dienecarbonyl-CoA hydratase 6 256 1.9E-113 T 01-11-2018 IPR017602 Cyclohexa-1,5-dienecarbonyl-CoA hydratase KEGG: 00362+4.2.1.100|MetaCyc: PWY-7401 CDA09_21775 6d8a46484cbf4b02bd44a45db2297e1c 256 Gene3D G3DSA:3.90.226.10 5 194 2.7E-44 T 01-11-2018 CDA09_11800 bb9bdcd994bf02b05a174dcbc0883eff 506 Pfam PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain 11 188 5.9E-57 T 01-11-2018 IPR006176 3-hydroxyacyl-CoA dehydrogenase, NAD binding GO:0003857|GO:0006631|GO:0016491|GO:0055114 KEGG: 00062+4.2.1.17+1.1.1.35|KEGG: 00071+4.2.1.17+1.1.1.35|KEGG: 00120+1.1.1.35|KEGG: 00280+4.2.1.17+1.1.1.35|KEGG: 00281+4.2.1.17+1.1.1.35|KEGG: 00310+4.2.1.17+1.1.1.35|KEGG: 00360+4.2.1.17|KEGG: 00362+4.2.1.17+1.1.1.35|KEGG: 00380+4.2.1.17+1.1.1.35|KEGG: 00410+4.2.1.17|KEGG: 00592+4.2.1.17|KEGG: 00623+1.1.1.35|KEGG: 00627+4.2.1.17|KEGG: 00640+4.2.1.17|KEGG: 00650+4.2.1.17+1.1.1.35|KEGG: 00720+4.2.1.17+1.1.1.35|KEGG: 00903+4.2.1.17|KEGG: 00930+4.2.1.17+1.1.1.35|MetaCyc: PWY-1361|MetaCyc: PWY-5109|MetaCyc: PWY-5136|MetaCyc: PWY-5138|MetaCyc: PWY-5177|MetaCyc: PWY-5789|MetaCyc: PWY-6435|MetaCyc: PWY-6583|MetaCyc: PWY-6863|MetaCyc: PWY-6883|MetaCyc: PWY-6944|MetaCyc: PWY-6945|MetaCyc: PWY-6946|MetaCyc: PWY-7007|MetaCyc: PWY-7046|MetaCyc: PWY-7094|MetaCyc: PWY-7216|MetaCyc: PWY-735|MetaCyc: PWY-7401|MetaCyc: PWY-7606|MetaCyc: PWY-7654|MetaCyc: PWY-7656|MetaCyc: PWY-7726|MetaCyc: PWY-7778|MetaCyc: PWY-7779 CDA09_11800 bb9bdcd994bf02b05a174dcbc0883eff 506 SUPERFAMILY SSF51735 10 190 2.07E-51 T 01-11-2018 IPR036291 NAD(P)-binding domain superfamily CDA09_11800 bb9bdcd994bf02b05a174dcbc0883eff 506 Gene3D G3DSA:3.30.750.190 297 412 2.4E-96 T 01-11-2018 CDA09_11800 bb9bdcd994bf02b05a174dcbc0883eff 506 SUPERFAMILY SSF48179 415 495 3.83E-18 T 01-11-2018 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily GO:0055114 CDA09_11800 bb9bdcd994bf02b05a174dcbc0883eff 506 SUPERFAMILY SSF48179 190 303 5.02E-29 T 01-11-2018 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily GO:0055114 CDA09_11800 bb9bdcd994bf02b05a174dcbc0883eff 506 Gene3D G3DSA:3.40.50.720 9 193 7.1E-61 T 01-11-2018 CDA09_11800 bb9bdcd994bf02b05a174dcbc0883eff 506 Gene3D G3DSA:1.10.1040.50 194 495 2.4E-96 T 01-11-2018 CDA09_11800 bb9bdcd994bf02b05a174dcbc0883eff 506 Pfam PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain 415 495 7.6E-18 T 01-11-2018 IPR006108 3-hydroxyacyl-CoA dehydrogenase, C-terminal GO:0003857|GO:0006631|GO:0016491|GO:0055114 KEGG: 00062+4.2.1.17+1.1.1.35|KEGG: 00071+4.2.1.17+1.1.1.35|KEGG: 00120+1.1.1.35|KEGG: 00280+4.2.1.17+1.1.1.35|KEGG: 00281+4.2.1.17+1.1.1.35|KEGG: 00310+4.2.1.17+1.1.1.35|KEGG: 00360+4.2.1.17|KEGG: 00362+4.2.1.17+1.1.1.35|KEGG: 00380+4.2.1.17+1.1.1.35|KEGG: 00410+4.2.1.17|KEGG: 00592+4.2.1.17|KEGG: 00623+1.1.1.35|KEGG: 00627+4.2.1.17|KEGG: 00640+4.2.1.17|KEGG: 00650+4.2.1.17+1.1.1.35|KEGG: 00720+4.2.1.17+1.1.1.35|KEGG: 00903+4.2.1.17|KEGG: 00930+4.2.1.17+1.1.1.35|MetaCyc: PWY-1361|MetaCyc: PWY-5109|MetaCyc: PWY-5136|MetaCyc: PWY-5138|MetaCyc: PWY-5177|MetaCyc: PWY-5789|MetaCyc: PWY-6435|MetaCyc: PWY-6583|MetaCyc: PWY-6863|MetaCyc: PWY-6883|MetaCyc: PWY-6944|MetaCyc: PWY-6945|MetaCyc: PWY-6946|MetaCyc: PWY-7007|MetaCyc: PWY-7046|MetaCyc: PWY-7094|MetaCyc: PWY-7216|MetaCyc: PWY-735|MetaCyc: PWY-7401|MetaCyc: PWY-7606|MetaCyc: PWY-7654|MetaCyc: PWY-7656|MetaCyc: PWY-7726|MetaCyc: PWY-7778|MetaCyc: PWY-7779 CDA09_11800 bb9bdcd994bf02b05a174dcbc0883eff 506 Pfam PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain 191 288 1.9E-24 T 01-11-2018 IPR006108 3-hydroxyacyl-CoA dehydrogenase, C-terminal GO:0003857|GO:0006631|GO:0016491|GO:0055114 KEGG: 00062+4.2.1.17+1.1.1.35|KEGG: 00071+4.2.1.17+1.1.1.35|KEGG: 00120+1.1.1.35|KEGG: 00280+4.2.1.17+1.1.1.35|KEGG: 00281+4.2.1.17+1.1.1.35|KEGG: 00310+4.2.1.17+1.1.1.35|KEGG: 00360+4.2.1.17|KEGG: 00362+4.2.1.17+1.1.1.35|KEGG: 00380+4.2.1.17+1.1.1.35|KEGG: 00410+4.2.1.17|KEGG: 00592+4.2.1.17|KEGG: 00623+1.1.1.35|KEGG: 00627+4.2.1.17|KEGG: 00640+4.2.1.17|KEGG: 00650+4.2.1.17+1.1.1.35|KEGG: 00720+4.2.1.17+1.1.1.35|KEGG: 00903+4.2.1.17|KEGG: 00930+4.2.1.17+1.1.1.35|MetaCyc: PWY-1361|MetaCyc: PWY-5109|MetaCyc: PWY-5136|MetaCyc: PWY-5138|MetaCyc: PWY-5177|MetaCyc: PWY-5789|MetaCyc: PWY-6435|MetaCyc: PWY-6583|MetaCyc: PWY-6863|MetaCyc: PWY-6883|MetaCyc: PWY-6944|MetaCyc: PWY-6945|MetaCyc: PWY-6946|MetaCyc: PWY-7007|MetaCyc: PWY-7046|MetaCyc: PWY-7094|MetaCyc: PWY-7216|MetaCyc: PWY-735|MetaCyc: PWY-7401|MetaCyc: PWY-7606|MetaCyc: PWY-7654|MetaCyc: PWY-7656|MetaCyc: PWY-7726|MetaCyc: PWY-7778|MetaCyc: PWY-7779 CDA09_08840 90110f5a9cec867a9908480453abfef3 658 Pfam PF16177 Acetyl-coenzyme A synthetase N-terminus 40 95 5.6E-10 T 01-11-2018 IPR032387 Acetyl-coenzyme A synthetase, N-terminal domain KEGG: 00010+6.2.1.1|KEGG: 00620+6.2.1.1|KEGG: 00630+6.2.1.1|KEGG: 00640+6.2.1.1|KEGG: 00680+6.2.1.1|KEGG: 00720+6.2.1.1|MetaCyc: PWY-5108|MetaCyc: PWY-5132|MetaCyc: PWY-5133|MetaCyc: PWY-6672|MetaCyc: PWY-7118|MetaCyc: PWY-7857 CDA09_08840 90110f5a9cec867a9908480453abfef3 658 Pfam PF00501 AMP-binding enzyme 104 528 7.5E-47 T 01-11-2018 IPR000873 AMP-dependent synthetase/ligase GO:0003824 CDA09_08840 90110f5a9cec867a9908480453abfef3 658 TIGRFAM TIGR01217 ac_ac_CoA_syn: acetoacetate-CoA ligase 8 656 8.6E-295 T 01-11-2018 IPR005914 Acetoacetyl-CoA synthase GO:0006629|GO:0030729 KEGG: 00280+6.2.1.16|KEGG: 00650+6.2.1.16|Reactome: R-HSA-77111 CDA09_08840 90110f5a9cec867a9908480453abfef3 658 Gene3D G3DSA:3.40.50.12780 85 526 1.2E-55 T 01-11-2018 CDA09_08840 90110f5a9cec867a9908480453abfef3 658 Gene3D G3DSA:3.30.300.30 528 655 6.3E-14 T 01-11-2018 CDA09_08840 90110f5a9cec867a9908480453abfef3 658 SUPERFAMILY SSF56801 39 632 1.44E-122 T 01-11-2018 CDA09_08840 90110f5a9cec867a9908480453abfef3 658 ProSitePatterns PS00455 Putative AMP-binding domain signature. 272 283 - T 01-11-2018 IPR020845 AMP-binding, conserved site CDA09_16300 b71cb0d47d019a92d87a6e060ec0c9ad 380 Gene3D G3DSA:3.40.50.880 157 378 7.0E-74 T 01-11-2018 IPR029062 Class I glutamine amidotransferase-like CDA09_16300 b71cb0d47d019a92d87a6e060ec0c9ad 380 SUPERFAMILY SSF52021 6 142 3.66E-57 T 01-11-2018 IPR036480 Carbamoyl-phosphate synthase small subunit, N-terminal domain superfamily KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 CDA09_16300 b71cb0d47d019a92d87a6e060ec0c9ad 380 Hamap MF_01209 Carbamoyl-phosphate synthase small chain [carA]. 5 380 48.642 T 01-11-2018 IPR006274 Carbamoyl-phosphate synthase, small subunit GO:0004088|GO:0006207|GO:0006541 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 CDA09_16300 b71cb0d47d019a92d87a6e060ec0c9ad 380 Pfam PF00117 Glutamine amidotransferase class-I 199 374 4.3E-47 T 01-11-2018 IPR017926 Glutamine amidotransferase CDA09_16300 b71cb0d47d019a92d87a6e060ec0c9ad 380 Pfam PF00988 Carbamoyl-phosphate synthase small chain, CPSase domain 7 134 1.6E-51 T 01-11-2018 IPR002474 Carbamoyl-phosphate synthase small subunit, N-terminal domain KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 CDA09_16300 b71cb0d47d019a92d87a6e060ec0c9ad 380 PRINTS PR00099 Carbamoyl-phosphate synthase protein GATase domain signature 235 249 2.1E-40 T 01-11-2018 CDA09_16300 b71cb0d47d019a92d87a6e060ec0c9ad 380 PRINTS PR00099 Carbamoyl-phosphate synthase protein GATase domain signature 308 319 2.1E-40 T 01-11-2018 CDA09_16300 b71cb0d47d019a92d87a6e060ec0c9ad 380 PRINTS PR00099 Carbamoyl-phosphate synthase protein GATase domain signature 196 210 2.1E-40 T 01-11-2018 CDA09_16300 b71cb0d47d019a92d87a6e060ec0c9ad 380 PRINTS PR00099 Carbamoyl-phosphate synthase protein GATase domain signature 266 282 2.1E-40 T 01-11-2018 CDA09_16300 b71cb0d47d019a92d87a6e060ec0c9ad 380 PRINTS PR00099 Carbamoyl-phosphate synthase protein GATase domain signature 283 300 2.1E-40 T 01-11-2018 CDA09_16300 b71cb0d47d019a92d87a6e060ec0c9ad 380 PRINTS PR00096 Glutamine amidotransferase superfamily signature 266 277 5.4E-10 T 01-11-2018 CDA09_16300 b71cb0d47d019a92d87a6e060ec0c9ad 380 PRINTS PR00096 Glutamine amidotransferase superfamily signature 238 247 5.4E-10 T 01-11-2018 CDA09_16300 b71cb0d47d019a92d87a6e060ec0c9ad 380 PRINTS PR00096 Glutamine amidotransferase superfamily signature 351 364 5.4E-10 T 01-11-2018 CDA09_16300 b71cb0d47d019a92d87a6e060ec0c9ad 380 TIGRFAM TIGR01368 CPSaseIIsmall: carbamoyl-phosphate synthase, small subunit 7 377 6.1E-144 T 01-11-2018 IPR006274 Carbamoyl-phosphate synthase, small subunit GO:0004088|GO:0006207|GO:0006541 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 CDA09_16300 b71cb0d47d019a92d87a6e060ec0c9ad 380 Gene3D G3DSA:3.50.30.20 5 156 5.0E-57 T 01-11-2018 IPR036480 Carbamoyl-phosphate synthase small subunit, N-terminal domain superfamily KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 CDA09_16300 b71cb0d47d019a92d87a6e060ec0c9ad 380 SMART SM01097 5 135 1.2E-92 T 01-11-2018 IPR002474 Carbamoyl-phosphate synthase small subunit, N-terminal domain KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 CDA09_16300 b71cb0d47d019a92d87a6e060ec0c9ad 380 SUPERFAMILY SSF52317 162 377 6.66E-62 T 01-11-2018 IPR029062 Class I glutamine amidotransferase-like CDA09_20370 f6af6e9afd6a8877b7e4092aa0d8489b 421 Hamap MF_02120 Diaminopimelate decarboxylase [lysA]. 21 418 41.955 T 01-11-2018 IPR002986 Diaminopimelate decarboxylase, LysA GO:0008836|GO:0009089 KEGG: 00300+4.1.1.20|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097 CDA09_20370 f6af6e9afd6a8877b7e4092aa0d8489b 421 PRINTS PR01181 Diaminopimelate decarboxylase signature 385 407 7.3E-30 T 01-11-2018 IPR002986 Diaminopimelate decarboxylase, LysA GO:0008836|GO:0009089 KEGG: 00300+4.1.1.20|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097 CDA09_20370 f6af6e9afd6a8877b7e4092aa0d8489b 421 PRINTS PR01181 Diaminopimelate decarboxylase signature 81 98 7.3E-30 T 01-11-2018 IPR002986 Diaminopimelate decarboxylase, LysA GO:0008836|GO:0009089 KEGG: 00300+4.1.1.20|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097 CDA09_20370 f6af6e9afd6a8877b7e4092aa0d8489b 421 PRINTS PR01181 Diaminopimelate decarboxylase signature 170 179 7.3E-30 T 01-11-2018 IPR002986 Diaminopimelate decarboxylase, LysA GO:0008836|GO:0009089 KEGG: 00300+4.1.1.20|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097 CDA09_20370 f6af6e9afd6a8877b7e4092aa0d8489b 421 PRINTS PR01181 Diaminopimelate decarboxylase signature 304 322 7.3E-30 T 01-11-2018 IPR002986 Diaminopimelate decarboxylase, LysA GO:0008836|GO:0009089 KEGG: 00300+4.1.1.20|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097 CDA09_20370 f6af6e9afd6a8877b7e4092aa0d8489b 421 SUPERFAMILY SSF51419 32 288 1.31E-78 T 01-11-2018 IPR029066 PLP-binding barrel CDA09_20370 f6af6e9afd6a8877b7e4092aa0d8489b 421 Pfam PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain 36 375 2.0E-24 T 01-11-2018 IPR022643 Orn/DAP/Arg decarboxylase 2, C-terminal GO:0003824 CDA09_20370 f6af6e9afd6a8877b7e4092aa0d8489b 421 Gene3D G3DSA:3.20.20.10 40 281 1.3E-148 T 01-11-2018 IPR029066 PLP-binding barrel CDA09_20370 f6af6e9afd6a8877b7e4092aa0d8489b 421 TIGRFAM TIGR01048 lysA: diaminopimelate decarboxylase 16 417 2.1E-155 T 01-11-2018 IPR002986 Diaminopimelate decarboxylase, LysA GO:0008836|GO:0009089 KEGG: 00300+4.1.1.20|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097 CDA09_20370 f6af6e9afd6a8877b7e4092aa0d8489b 421 SUPERFAMILY SSF50621 260 417 1.26E-52 T 01-11-2018 IPR009006 Alanine racemase/group IV decarboxylase, C-terminal GO:0003824 CDA09_20370 f6af6e9afd6a8877b7e4092aa0d8489b 421 PRINTS PR01179 Ornithine/diaminopimelate/arginine (ODA) decarboxylase family signature 375 388 4.2E-24 T 01-11-2018 IPR000183 Ornithine/DAP/Arg decarboxylase GO:0003824 CDA09_20370 f6af6e9afd6a8877b7e4092aa0d8489b 421 PRINTS PR01179 Ornithine/diaminopimelate/arginine (ODA) decarboxylase family signature 196 209 4.2E-24 T 01-11-2018 IPR000183 Ornithine/DAP/Arg decarboxylase GO:0003824 CDA09_20370 f6af6e9afd6a8877b7e4092aa0d8489b 421 PRINTS PR01179 Ornithine/diaminopimelate/arginine (ODA) decarboxylase family signature 83 95 4.2E-24 T 01-11-2018 IPR000183 Ornithine/DAP/Arg decarboxylase GO:0003824 CDA09_20370 f6af6e9afd6a8877b7e4092aa0d8489b 421 PRINTS PR01179 Ornithine/diaminopimelate/arginine (ODA) decarboxylase family signature 276 295 4.2E-24 T 01-11-2018 IPR000183 Ornithine/DAP/Arg decarboxylase GO:0003824 CDA09_20370 f6af6e9afd6a8877b7e4092aa0d8489b 421 PRINTS PR01179 Ornithine/diaminopimelate/arginine (ODA) decarboxylase family signature 63 81 4.2E-24 T 01-11-2018 IPR000183 Ornithine/DAP/Arg decarboxylase GO:0003824 CDA09_20370 f6af6e9afd6a8877b7e4092aa0d8489b 421 Pfam PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain 43 285 4.7E-66 T 01-11-2018 IPR022644 Orn/DAP/Arg decarboxylase 2, N-terminal GO:0003824 CDA09_20370 f6af6e9afd6a8877b7e4092aa0d8489b 421 Gene3D G3DSA:2.40.37.10 23 414 1.3E-148 T 01-11-2018 IPR009006 Alanine racemase/group IV decarboxylase, C-terminal GO:0003824 CDA09_02705 19ac899fb497af6d8349fb65b07ba6d3 322 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 8 67 1.4E-18 T 01-11-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 CDA09_02705 19ac899fb497af6d8349fb65b07ba6d3 322 Gene3D G3DSA:1.10.10.10 7 95 2.8E-23 T 01-11-2018 IPR036388 Winged helix-like DNA-binding domain superfamily CDA09_02705 19ac899fb497af6d8349fb65b07ba6d3 322 SUPERFAMILY SSF53850 94 313 2.17E-32 T 01-11-2018 CDA09_02705 19ac899fb497af6d8349fb65b07ba6d3 322 SUPERFAMILY SSF46785 3 86 3.45E-21 T 01-11-2018 IPR036390 Winged helix DNA-binding domain superfamily CDA09_02705 19ac899fb497af6d8349fb65b07ba6d3 322 Pfam PF03466 LysR substrate binding domain 94 310 5.9E-29 T 01-11-2018 IPR005119 LysR, substrate-binding CDA09_02705 19ac899fb497af6d8349fb65b07ba6d3 322 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 23 34 7.7E-6 T 01-11-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 CDA09_02705 19ac899fb497af6d8349fb65b07ba6d3 322 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 44 55 7.7E-6 T 01-11-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 CDA09_02705 19ac899fb497af6d8349fb65b07ba6d3 322 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 34 44 7.7E-6 T 01-11-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 CDA09_02705 19ac899fb497af6d8349fb65b07ba6d3 322 Gene3D G3DSA:3.40.190.10 176 279 1.4E-53 T 01-11-2018 CDA09_02705 19ac899fb497af6d8349fb65b07ba6d3 322 Gene3D G3DSA:3.40.190.10 103 306 1.4E-53 T 01-11-2018 CDA09_22315 bfd76ddc1ed0bdbf50d4f99596bdcf4d 365 Pfam PF13442 Cytochrome C oxidase, cbb3-type, subunit III 235 318 7.1E-6 T 01-11-2018 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 Reactome: R-HSA-111457|Reactome: R-HSA-111458|Reactome: R-HSA-111459|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 CDA09_22315 bfd76ddc1ed0bdbf50d4f99596bdcf4d 365 SUPERFAMILY SSF46626 231 327 9.31E-15 T 01-11-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 CDA09_22315 bfd76ddc1ed0bdbf50d4f99596bdcf4d 365 Gene3D G3DSA:1.10.760.10 225 335 1.0E-22 T 01-11-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 CDA09_09040 d170739e9c4787afbea47cc90b0141e0 388 Gene3D G3DSA:3.40.47.10 3 387 6.4E-93 T 01-11-2018 IPR016039 Thiolase-like GO:0003824 CDA09_09040 d170739e9c4787afbea47cc90b0141e0 388 SUPERFAMILY SSF53901 5 232 3.55E-22 T 01-11-2018 IPR016039 Thiolase-like GO:0003824 CDA09_09040 d170739e9c4787afbea47cc90b0141e0 388 PIRSF PIRSF000429 4 341 5.3E-20 T 01-11-2018 IPR002155 Thiolase GO:0016747 CDA09_09040 d170739e9c4787afbea47cc90b0141e0 388 SUPERFAMILY SSF53901 268 378 5.47E-12 T 01-11-2018 IPR016039 Thiolase-like GO:0003824 CDA09_14435 4653e87f3f1b36710f012d30e0492569 455 SUPERFAMILY SSF55073 277 431 7.85E-50 T 01-11-2018 IPR029787 Nucleotide cyclase CDA09_14435 4653e87f3f1b36710f012d30e0492569 455 SUPERFAMILY SSF158472 202 251 3.79E-6 T 01-11-2018 CDA09_14435 4653e87f3f1b36710f012d30e0492569 455 Pfam PF00990 Diguanylate cyclase, GGDEF domain 272 428 1.3E-44 T 01-11-2018 IPR000160 GGDEF domain CDA09_14435 4653e87f3f1b36710f012d30e0492569 455 SMART SM00267 261 433 8.7E-61 T 01-11-2018 IPR000160 GGDEF domain CDA09_14435 4653e87f3f1b36710f012d30e0492569 455 Gene3D G3DSA:1.20.1480.50 170 261 1.6E-8 T 01-11-2018 CDA09_14435 4653e87f3f1b36710f012d30e0492569 455 SMART SM00304 202 255 8.3E-7 T 01-11-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 CDA09_14435 4653e87f3f1b36710f012d30e0492569 455 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 268 430 9.9E-48 T 01-11-2018 IPR000160 GGDEF domain CDA09_14435 4653e87f3f1b36710f012d30e0492569 455 Gene3D G3DSA:3.30.70.270 267 436 5.0E-59 T 01-11-2018 CDA09_14435 4653e87f3f1b36710f012d30e0492569 455 Pfam PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) 41 170 7.7E-10 T 01-11-2018 IPR019247 Histidine kinase BarA, N-terminal CDA09_06210 2f020562257b9f903b6acd7b12502d77 450 TIGRFAM TIGR01942 pcnB: poly(A) polymerase 24 442 8.6E-144 T 01-11-2018 IPR010206 Poly(A) polymerase I GO:0003723|GO:0004652|GO:0006378 CDA09_06210 2f020562257b9f903b6acd7b12502d77 450 Pfam PF12626 Polymerase A arginine-rich C-terminus 321 438 1.5E-39 T 01-11-2018 IPR025866 Polymerase A arginine-rich C-terminal domain CDA09_06210 2f020562257b9f903b6acd7b12502d77 450 SUPERFAMILY SSF81301 25 177 4.36E-40 T 01-11-2018 CDA09_06210 2f020562257b9f903b6acd7b12502d77 450 SUPERFAMILY SSF81891 178 409 1.96E-48 T 01-11-2018 CDA09_06210 2f020562257b9f903b6acd7b12502d77 450 Pfam PF12627 Probable RNA and SrmB- binding site of polymerase A 207 268 5.0E-19 T 01-11-2018 IPR032828 tRNA nucleotidyltransferase/poly(A) polymerase, RNA and SrmB- binding domain Reactome: R-HSA-6784531|Reactome: R-HSA-6785470 CDA09_06210 2f020562257b9f903b6acd7b12502d77 450 Pfam PF01743 Poly A polymerase head domain 54 180 8.4E-35 T 01-11-2018 IPR002646 Poly A polymerase, head domain GO:0003723|GO:0006396|GO:0016779 Reactome: R-HSA-6784531|Reactome: R-HSA-6785470 CDA09_06210 2f020562257b9f903b6acd7b12502d77 450 Hamap MF_00957 Poly(A) polymerase I [pcnB]. 18 440 34.954 T 01-11-2018 IPR010206 Poly(A) polymerase I GO:0003723|GO:0004652|GO:0006378 CDA09_06210 2f020562257b9f903b6acd7b12502d77 450 Gene3D G3DSA:1.10.3090.10 178 422 3.4E-76 T 01-11-2018 CDA09_06210 2f020562257b9f903b6acd7b12502d77 450 Gene3D G3DSA:3.30.460.10 21 176 1.9E-57 T 01-11-2018 CDA09_15195 01c094ffecf5f8a67c89a0d76b40744b 126 Gene3D G3DSA:3.90.470.20 1 125 3.6E-33 T 01-11-2018 IPR037143 4'-phosphopantetheinyl transferase domain superfamily GO:0000287|GO:0008897 KEGG: 00770+2.7.8.7|MetaCyc: PWY-6012|MetaCyc: PWY-6012-1|MetaCyc: PWY-6289|Reactome: R-HSA-199220 CDA09_15195 01c094ffecf5f8a67c89a0d76b40744b 126 TIGRFAM TIGR00556 pantethn_trn: phosphopantetheine--protein transferase domain 1 125 5.0E-21 T 01-11-2018 IPR004568 Phosphopantetheine-protein transferase domain GO:0000287|GO:0006633|GO:0008897 KEGG: 00770+2.7.8.7|MetaCyc: PWY-6012|MetaCyc: PWY-6012-1|MetaCyc: PWY-6289 CDA09_15195 01c094ffecf5f8a67c89a0d76b40744b 126 ProDom PD004282 TRANSFERASE SYNTHASE HOLO-ACYL-CARRIER-PROTEIN HOLO-ACP 4'-PHOSPHOPANTETHEINYL FATTY ACID METAL-BINDING MAGNESIUM LIPID 8 124 1.0E-27 T 01-11-2018 IPR004568 Phosphopantetheine-protein transferase domain GO:0000287|GO:0006633|GO:0008897 KEGG: 00770+2.7.8.7|MetaCyc: PWY-6012|MetaCyc: PWY-6012-1|MetaCyc: PWY-6289 CDA09_15195 01c094ffecf5f8a67c89a0d76b40744b 126 Pfam PF01648 4'-phosphopantetheinyl transferase superfamily 4 120 4.0E-19 T 01-11-2018 IPR008278 4'-phosphopantetheinyl transferase domain GO:0000287|GO:0008897 KEGG: 00770+2.7.8.7|MetaCyc: PWY-6012|MetaCyc: PWY-6012-1|MetaCyc: PWY-6289|Reactome: R-HSA-199220 CDA09_15195 01c094ffecf5f8a67c89a0d76b40744b 126 TIGRFAM TIGR00516 acpS: holo-[acyl-carrier-protein] synthase 1 125 2.5E-27 T 01-11-2018 IPR002582 Holo-[acyl carrier protein] synthase GO:0000287|GO:0006633|GO:0008897 KEGG: 00770+2.7.8.7|MetaCyc: PWY-6012|MetaCyc: PWY-6012-1|MetaCyc: PWY-6289 CDA09_15195 01c094ffecf5f8a67c89a0d76b40744b 126 SUPERFAMILY SSF56214 1 125 2.35E-26 T 01-11-2018 IPR037143 4'-phosphopantetheinyl transferase domain superfamily GO:0000287|GO:0008897 KEGG: 00770+2.7.8.7|MetaCyc: PWY-6012|MetaCyc: PWY-6012-1|MetaCyc: PWY-6289|Reactome: R-HSA-199220 CDA09_15195 01c094ffecf5f8a67c89a0d76b40744b 126 Hamap MF_00101 Holo-[acyl-carrier-protein] synthase [acpS]. 3 125 22.539 T 01-11-2018 IPR002582 Holo-[acyl carrier protein] synthase GO:0000287|GO:0006633|GO:0008897 KEGG: 00770+2.7.8.7|MetaCyc: PWY-6012|MetaCyc: PWY-6012-1|MetaCyc: PWY-6289 CDA09_04930 8710704a05a243a82fd235709873d832 417 PIRSF PIRSF000445 1 417 3.2E-151 T 01-11-2018 IPR000343 Tetrapyrrole biosynthesis, glutamyl-tRNA reductase GO:0008883|GO:0033014|GO:0050661|GO:0055114 KEGG: 00860+1.2.1.70|MetaCyc: PWY-5188 CDA09_04930 8710704a05a243a82fd235709873d832 417 Pfam PF01488 Shikimate / quinate 5-dehydrogenase 168 302 1.1E-42 T 01-11-2018 IPR006151 Quinate/shikimate 5-dehydrogenase/glutamyl-tRNA reductase CDA09_04930 8710704a05a243a82fd235709873d832 417 Gene3D G3DSA:3.30.460.30 2 154 1.9E-57 T 01-11-2018 IPR036343 Glutamyl-tRNA reductase, N-terminal domain superfamily GO:0008883|GO:0033014|GO:0050661|GO:0055114 KEGG: 00860+1.2.1.70|MetaCyc: PWY-5188 CDA09_04930 8710704a05a243a82fd235709873d832 417 SUPERFAMILY SSF51735 159 311 3.55E-34 T 01-11-2018 IPR036291 NAD(P)-binding domain superfamily CDA09_04930 8710704a05a243a82fd235709873d832 417 Hamap MF_00087 Glutamyl-tRNA reductase [hemA]. 2 414 30.169 T 01-11-2018 IPR000343 Tetrapyrrole biosynthesis, glutamyl-tRNA reductase GO:0008883|GO:0033014|GO:0050661|GO:0055114 KEGG: 00860+1.2.1.70|MetaCyc: PWY-5188 CDA09_04930 8710704a05a243a82fd235709873d832 417 ProSitePatterns PS00747 Glutamyl-tRNA reductase signature. 95 118 - T 01-11-2018 IPR018214 Glutamyl-tRNA reductase, conserved site GO:0008883|GO:0055114 KEGG: 00860+1.2.1.70|MetaCyc: PWY-5188 CDA09_04930 8710704a05a243a82fd235709873d832 417 Pfam PF05201 Glutamyl-tRNAGlu reductase, N-terminal domain 6 152 3.0E-50 T 01-11-2018 IPR015895 Tetrapyrrole biosynthesis, glutamyl-tRNA reductase, N-terminal GO:0008883|GO:0033014|GO:0050661|GO:0055114 KEGG: 00860+1.2.1.70|MetaCyc: PWY-5188 CDA09_04930 8710704a05a243a82fd235709873d832 417 TIGRFAM TIGR01035 hemA: glutamyl-tRNA reductase 5 413 2.4E-131 T 01-11-2018 IPR000343 Tetrapyrrole biosynthesis, glutamyl-tRNA reductase GO:0008883|GO:0033014|GO:0050661|GO:0055114 KEGG: 00860+1.2.1.70|MetaCyc: PWY-5188 CDA09_04930 8710704a05a243a82fd235709873d832 417 SUPERFAMILY SSF69075 314 414 6.28E-29 T 01-11-2018 IPR036453 Glutamyl tRNA-reductase dimerization domain superfamily GO:0008883|GO:0033014|GO:0050661|GO:0055114 KEGG: 00860+1.2.1.70|MetaCyc: PWY-5188 CDA09_04930 8710704a05a243a82fd235709873d832 417 Pfam PF00745 Glutamyl-tRNAGlu reductase, dimerisation domain 316 413 6.3E-29 T 01-11-2018 IPR015896 Tetrapyrrole biosynthesis, glutamyl-tRNA reductase, dimerisation domain GO:0008883|GO:0033014|GO:0050661|GO:0055114 KEGG: 00860+1.2.1.70|MetaCyc: PWY-5188 CDA09_04930 8710704a05a243a82fd235709873d832 417 Gene3D G3DSA:3.40.50.720 158 309 5.7E-42 T 01-11-2018 CDA09_04930 8710704a05a243a82fd235709873d832 417 SUPERFAMILY SSF69742 1 154 2.35E-48 T 01-11-2018 IPR036343 Glutamyl-tRNA reductase, N-terminal domain superfamily GO:0008883|GO:0033014|GO:0050661|GO:0055114 KEGG: 00860+1.2.1.70|MetaCyc: PWY-5188 CDA09_03765 84da13b304548200d3051d6c58900b0c 66 Pfam PF11146 Protein of unknown function (DUF2905) 3 64 4.7E-25 T 01-11-2018 IPR021320 Protein of unknown function DUF2905 CDA09_22340 f7958581655ae140355333aa276d57ff 636 TIGRFAM TIGR03938 deacetyl_PgaB: poly-beta-1,6-N-acetyl-D-glucosamine N-deacetylase PgaB 22 631 4.9E-238 T 01-11-2018 IPR023854 Poly-beta-1,6-N-acetyl-D-glucosamine N-deacetylase PgaB GO:0016810|GO:0043708 CDA09_22340 f7958581655ae140355333aa276d57ff 636 SUPERFAMILY SSF88713 45 269 7.91E-38 T 01-11-2018 IPR011330 Glycoside hydrolase/deacetylase, beta/alpha-barrel GO:0003824|GO:0005975 CDA09_22340 f7958581655ae140355333aa276d57ff 636 Pfam PF14883 Hypothetical glycosyl hydrolase family 13 292 611 1.1E-122 T 01-11-2018 IPR032772 Poly-beta-1,6-N-acetyl-D-glucosamine N-deacetylase PgaB, C-terminal CDA09_22340 f7958581655ae140355333aa276d57ff 636 Gene3D G3DSA:3.20.20.80 282 636 3.8E-125 T 01-11-2018 CDA09_22340 f7958581655ae140355333aa276d57ff 636 Gene3D G3DSA:3.20.20.370 17 281 3.8E-66 T 01-11-2018 CDA09_22340 f7958581655ae140355333aa276d57ff 636 Pfam PF01522 Polysaccharide deacetylase 76 243 2.6E-26 T 01-11-2018 IPR002509 NodB homology domain GO:0005975|GO:0016810 CDA09_16005 069851ff39ec6d7e5cbb59512707d3e7 301 Gene3D G3DSA:3.40.190.10 170 263 8.9E-10 T 01-11-2018 CDA09_16005 069851ff39ec6d7e5cbb59512707d3e7 301 SUPERFAMILY SSF53850 92 295 1.34E-16 T 01-11-2018 CDA09_16005 069851ff39ec6d7e5cbb59512707d3e7 301 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 39 50 6.6E-8 T 01-11-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 CDA09_16005 069851ff39ec6d7e5cbb59512707d3e7 301 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 18 29 6.6E-8 T 01-11-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 CDA09_16005 069851ff39ec6d7e5cbb59512707d3e7 301 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 29 39 6.6E-8 T 01-11-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 CDA09_16005 069851ff39ec6d7e5cbb59512707d3e7 301 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 4 62 2.1E-17 T 01-11-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 CDA09_16005 069851ff39ec6d7e5cbb59512707d3e7 301 Gene3D G3DSA:1.10.10.10 1 83 4.2E-21 T 01-11-2018 IPR036388 Winged helix-like DNA-binding domain superfamily CDA09_16005 069851ff39ec6d7e5cbb59512707d3e7 301 SUPERFAMILY SSF46785 1 85 7.32E-20 T 01-11-2018 IPR036390 Winged helix DNA-binding domain superfamily CDA09_16005 069851ff39ec6d7e5cbb59512707d3e7 301 Pfam PF03466 LysR substrate binding domain 92 295 8.4E-18 T 01-11-2018 IPR005119 LysR, substrate-binding CDA09_16005 069851ff39ec6d7e5cbb59512707d3e7 301 Gene3D G3DSA:3.40.190.10 92 169 8.9E-10 T 01-11-2018 CDA09_04615 97dec0bb8041b593a990aa18162e2f5b 107 SUPERFAMILY SSF82607 10 101 1.28E-33 T 01-11-2018 IPR036894 Nucleoid-associated protein YbaB-like domain superfamily CDA09_04615 97dec0bb8041b593a990aa18162e2f5b 107 Pfam PF02575 YbaB/EbfC DNA-binding family 10 98 9.4E-32 T 01-11-2018 IPR004401 Nucleoid-associated protein YbaB/EbfC family CDA09_04615 97dec0bb8041b593a990aa18162e2f5b 107 Gene3D G3DSA:3.30.1310.10 1 107 3.0E-41 T 01-11-2018 IPR036894 Nucleoid-associated protein YbaB-like domain superfamily CDA09_04615 97dec0bb8041b593a990aa18162e2f5b 107 Hamap MF_00274 Nucleoid-associated protein YbaB [ybaB]. 4 96 22.854 T 01-11-2018 IPR004401 Nucleoid-associated protein YbaB/EbfC family CDA09_04615 97dec0bb8041b593a990aa18162e2f5b 107 PIRSF PIRSF004555 2 107 3.1E-35 T 01-11-2018 IPR004401 Nucleoid-associated protein YbaB/EbfC family CDA09_04615 97dec0bb8041b593a990aa18162e2f5b 107 TIGRFAM TIGR00103 DNA_YbaB_EbfC: DNA-binding protein, YbaB/EbfC family 3 103 1.4E-32 T 01-11-2018 IPR004401 Nucleoid-associated protein YbaB/EbfC family CDA09_13500 3ae3447126bc9c7ae70630986e643d09 500 Pfam PF00665 Integrase core domain 129 253 7.6E-15 T 01-11-2018 IPR001584 Integrase, catalytic core GO:0015074 CDA09_13500 3ae3447126bc9c7ae70630986e643d09 500 Pfam PF13384 Homeodomain-like domain 14 47 5.5E-6 T 01-11-2018 CDA09_05295 6c27a94186f0b22d463a7b8726fc7b41 473 Pfam PF01551 Peptidase family M23 373 466 8.7E-24 T 01-11-2018 IPR016047 Peptidase M23 CDA09_05295 6c27a94186f0b22d463a7b8726fc7b41 473 Gene3D G3DSA:2.70.70.10 336 471 8.6E-31 T 01-11-2018 IPR011055 Duplicated hybrid motif CDA09_05295 6c27a94186f0b22d463a7b8726fc7b41 473 SUPERFAMILY SSF57997 32 121 1.21E-6 T 01-11-2018 CDA09_05295 6c27a94186f0b22d463a7b8726fc7b41 473 SUPERFAMILY SSF51261 332 469 7.85E-40 T 01-11-2018 IPR011055 Duplicated hybrid motif CDA09_20645 0197d540f160a5c1032b22e89e9303ec 443 Gene3D G3DSA:1.10.8.60 335 440 1.4E-34 T 01-11-2018 CDA09_20645 0197d540f160a5c1032b22e89e9303ec 443 TIGRFAM TIGR00390 hslU: ATP-dependent protease HslVU, ATPase subunit 4 443 2.5E-202 T 01-11-2018 IPR004491 Heat shock protein HslU GO:0005524|GO:0005737|GO:0009376|GO:0016887|GO:0070011 CDA09_20645 0197d540f160a5c1032b22e89e9303ec 443 Pfam PF07724 AAA domain (Cdc48 subfamily) 190 329 1.9E-39 T 01-11-2018 IPR003959 ATPase, AAA-type, core GO:0005524 CDA09_20645 0197d540f160a5c1032b22e89e9303ec 443 Hamap MF_00249 ATP-dependent protease ATPase subunit HslU [hslU]. 1 443 42.493 T 01-11-2018 IPR004491 Heat shock protein HslU GO:0005524|GO:0005737|GO:0009376|GO:0016887|GO:0070011 CDA09_20645 0197d540f160a5c1032b22e89e9303ec 443 Pfam PF00004 ATPase family associated with various cellular activities (AAA) 53 103 1.4E-6 T 01-11-2018 IPR003959 ATPase, AAA-type, core GO:0005524 CDA09_20645 0197d540f160a5c1032b22e89e9303ec 443 SUPERFAMILY SSF52540 3 438 8.91E-86 T 01-11-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CDA09_20645 0197d540f160a5c1032b22e89e9303ec 443 SMART SM01086 335 431 3.1E-15 T 01-11-2018 IPR019489 Clp ATPase, C-terminal CDA09_20645 0197d540f160a5c1032b22e89e9303ec 443 SMART SM00382 49 332 2.1E-11 T 01-11-2018 IPR003593 AAA+ ATPase domain CDA09_12610 613b4b2b76c0d76fe37ea7382040ce27 930 Pfam PF13555 P-loop containing region of AAA domain 5 48 1.1E-9 T 01-11-2018 CDA09_12610 613b4b2b76c0d76fe37ea7382040ce27 930 Pfam PF13304 AAA domain, putative AbiEii toxin, Type IV TA system 839 891 1.1E-6 T 01-11-2018 IPR003959 ATPase, AAA-type, core GO:0005524 CDA09_12610 613b4b2b76c0d76fe37ea7382040ce27 930 SUPERFAMILY SSF52540 531 900 1.42E-14 T 01-11-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CDA09_12610 613b4b2b76c0d76fe37ea7382040ce27 930 Gene3D G3DSA:3.40.50.300 2 263 2.9E-19 T 01-11-2018 CDA09_12610 613b4b2b76c0d76fe37ea7382040ce27 930 Gene3D G3DSA:3.40.50.300 706 917 2.9E-14 T 01-11-2018 CDA09_12610 613b4b2b76c0d76fe37ea7382040ce27 930 SUPERFAMILY SSF52540 1 912 2.09E-26 T 01-11-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CDA09_15890 c374f51d185a2afacb032e5006019d87 577 SUPERFAMILY SSF51735 293 429 1.52E-26 T 01-11-2018 IPR036291 NAD(P)-binding domain superfamily CDA09_15890 c374f51d185a2afacb032e5006019d87 577 SUPERFAMILY SSF51735 131 278 6.56E-24 T 01-11-2018 IPR036291 NAD(P)-binding domain superfamily CDA09_15890 c374f51d185a2afacb032e5006019d87 577 Gene3D G3DSA:1.10.287.70 14 118 1.2E-8 T 01-11-2018 CDA09_15890 c374f51d185a2afacb032e5006019d87 577 SUPERFAMILY SSF116726 498 538 8.5E-6 T 01-11-2018 IPR036721 Regulator of K+ conductance, C-terminal domain superfamily GO:0006813 CDA09_15890 c374f51d185a2afacb032e5006019d87 577 Gene3D G3DSA:3.40.50.720 282 421 1.7E-24 T 01-11-2018 CDA09_15890 c374f51d185a2afacb032e5006019d87 577 Pfam PF02254 TrkA-N domain 132 253 2.6E-19 T 01-11-2018 IPR003148 Regulator of K+ conductance, N-terminal GO:0006813 CDA09_15890 c374f51d185a2afacb032e5006019d87 577 Pfam PF02254 TrkA-N domain 297 406 3.0E-18 T 01-11-2018 IPR003148 Regulator of K+ conductance, N-terminal GO:0006813 CDA09_15890 c374f51d185a2afacb032e5006019d87 577 Pfam PF07885 Ion channel 24 105 5.6E-6 T 01-11-2018 IPR013099 Potassium channel domain CDA09_15890 c374f51d185a2afacb032e5006019d87 577 SUPERFAMILY SSF81324 2 149 3.53E-15 T 01-11-2018 CDA09_15890 c374f51d185a2afacb032e5006019d87 577 Pfam PF02080 TrkA-C domain 497 538 1.6E-6 T 01-11-2018 IPR006037 Regulator of K+ conductance, C-terminal GO:0006813|GO:0008324 CDA09_15890 c374f51d185a2afacb032e5006019d87 577 Gene3D G3DSA:3.40.50.720 126 269 2.5E-26 T 01-11-2018 CDA09_06585 5383424e118f782618a9008e58f10ab7 245 TIGRFAM TIGR01726 HEQRo_perm_3TM: amino ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family 25 131 2.6E-19 T 01-11-2018 IPR010065 Amino acid ABC transporter, permease protein, 3-TM domain GO:0016021|GO:0022857|GO:0043190|GO:0071705 CDA09_06585 5383424e118f782618a9008e58f10ab7 245 SUPERFAMILY SSF161098 24 222 6.02E-39 T 01-11-2018 IPR035906 MetI-like superfamily CDA09_06585 5383424e118f782618a9008e58f10ab7 245 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 44 231 4.0E-19 T 01-11-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 CDA09_06585 5383424e118f782618a9008e58f10ab7 245 Gene3D G3DSA:1.10.3720.10 18 237 1.4E-43 T 01-11-2018 IPR035906 MetI-like superfamily CDA09_05040 db742f24aa560f405d1a002853e9e1dc 439 Gene3D G3DSA:3.10.50.40 291 429 1.2E-42 T 01-11-2018 CDA09_05040 db742f24aa560f405d1a002853e9e1dc 439 Hamap MF_01183 Chaperone SurA [surA]. 10 437 34.918 T 01-11-2018 IPR023034 Peptidyl-prolyl isomerase SurA GO:0003755|GO:0006457|GO:0030288|GO:0042277|GO:0043165|GO:0050821|GO:0051082|GO:0060274 CDA09_05040 db742f24aa560f405d1a002853e9e1dc 439 SUPERFAMILY SSF54534 181 284 3.07E-28 T 01-11-2018 CDA09_05040 db742f24aa560f405d1a002853e9e1dc 439 SUPERFAMILY SSF109998 35 207 5.1E-43 T 01-11-2018 IPR027304 Trigger factor/SurA domain superfamily CDA09_05040 db742f24aa560f405d1a002853e9e1dc 439 Pfam PF13616 PPIC-type PPIASE domain 291 392 2.2E-27 T 01-11-2018 CDA09_05040 db742f24aa560f405d1a002853e9e1dc 439 Pfam PF09312 SurA N-terminal domain 35 152 2.8E-41 T 01-11-2018 IPR015391 SurA N-terminal CDA09_05040 db742f24aa560f405d1a002853e9e1dc 439 ProSitePatterns PS01096 PpiC-type peptidyl-prolyl cis-trans isomerase signature. 331 351 - T 01-11-2018 IPR023058 Peptidyl-prolyl cis-trans isomerase, PpiC-type, conserved site Reactome: R-HSA-1169408|Reactome: R-HSA-6804756|Reactome: R-HSA-6811555|Reactome: R-HSA-936440 CDA09_05040 db742f24aa560f405d1a002853e9e1dc 439 SUPERFAMILY SSF54534 295 393 1.18E-31 T 01-11-2018 CDA09_05040 db742f24aa560f405d1a002853e9e1dc 439 Gene3D G3DSA:3.10.50.40 181 283 6.3E-77 T 01-11-2018 CDA09_05040 db742f24aa560f405d1a002853e9e1dc 439 Gene3D G3DSA:1.10.4030.30 36 287 6.3E-77 T 01-11-2018 CDA09_05040 db742f24aa560f405d1a002853e9e1dc 439 Pfam PF00639 PPIC-type PPIASE domain 187 280 5.9E-22 T 01-11-2018 IPR000297 Peptidyl-prolyl cis-trans isomerase, PpiC-type GO:0003755 CDA09_03395 7eb6692fd7477323afd56593e31964da 253 SMART SM00862 163 239 2.3E-20 T 01-11-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 CDA09_03395 7eb6692fd7477323afd56593e31964da 253 Gene3D G3DSA:3.40.50.2300 2 133 4.3E-39 T 01-11-2018 CDA09_03395 7eb6692fd7477323afd56593e31964da 253 SMART SM00448 6 119 5.9E-44 T 01-11-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 CDA09_03395 7eb6692fd7477323afd56593e31964da 253 SUPERFAMILY SSF52172 6 133 2.13E-43 T 01-11-2018 IPR011006 CheY-like superfamily CDA09_03395 7eb6692fd7477323afd56593e31964da 253 Pfam PF00072 Response regulator receiver domain 8 120 1.1E-29 T 01-11-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 CDA09_03395 7eb6692fd7477323afd56593e31964da 253 SUPERFAMILY SSF46894 140 240 2.21E-23 T 01-11-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 CDA09_03395 7eb6692fd7477323afd56593e31964da 253 Pfam PF00486 Transcriptional regulatory protein, C terminal 165 239 1.4E-20 T 01-11-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 CDA09_03395 7eb6692fd7477323afd56593e31964da 253 Gene3D G3DSA:1.10.10.10 134 243 2.9E-30 T 01-11-2018 IPR036388 Winged helix-like DNA-binding domain superfamily CDA09_13725 693b03040d294b76aef5512e59216412 253 Gene3D G3DSA:3.40.50.620 1 252 5.7E-88 T 01-11-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold CDA09_13725 693b03040d294b76aef5512e59216412 253 PIRSF PIRSF000090 1 253 1.1E-83 T 01-11-2018 IPR012255 Electron transfer flavoprotein, beta subunit GO:0009055 Reactome: R-HSA-611105|Reactome: R-HSA-8876725 CDA09_13725 693b03040d294b76aef5512e59216412 253 SMART SM00893 23 215 1.5E-68 T 01-11-2018 IPR014730 Electron transfer flavoprotein, alpha/beta-subunit, N-terminal Reactome: R-HSA-611105 CDA09_13725 693b03040d294b76aef5512e59216412 253 ProSitePatterns PS01065 Electron transfer flavoprotein beta-subunit signature. 159 179 - T 01-11-2018 IPR000049 Electron transfer flavoprotein, beta-subunit, conserved site GO:0009055 Reactome: R-HSA-611105|Reactome: R-HSA-8876725 CDA09_13725 693b03040d294b76aef5512e59216412 253 SUPERFAMILY SSF52402 1 248 2.58E-84 T 01-11-2018 CDA09_13725 693b03040d294b76aef5512e59216412 253 Pfam PF01012 Electron transfer flavoprotein domain 30 210 2.7E-46 T 01-11-2018 IPR014730 Electron transfer flavoprotein, alpha/beta-subunit, N-terminal Reactome: R-HSA-611105 CDA09_06010 298b55ec04044eb134d7e62c0f8cb432 409 Hamap MF_00005 Argininosuccinate synthase [argG]. 4 406 50.522 T 01-11-2018 IPR023434 Argininosuccinate synthase, type 1 subfamily GO:0004055 KEGG: 00220+6.3.4.5|KEGG: 00250+6.3.4.5|MetaCyc: PWY-4983|MetaCyc: PWY-4984|MetaCyc: PWY-5|MetaCyc: PWY-5154|MetaCyc: PWY-7400|Reactome: R-HSA-70635 CDA09_06010 298b55ec04044eb134d7e62c0f8cb432 409 Gene3D G3DSA:3.90.1260.10 181 409 7.1E-97 T 01-11-2018 IPR024074 Argininosuccinate synthetase, catalytic/multimerisation domain body GO:0004055 KEGG: 00220+6.3.4.5|KEGG: 00250+6.3.4.5|MetaCyc: PWY-4983|MetaCyc: PWY-4984|MetaCyc: PWY-5|MetaCyc: PWY-5154|MetaCyc: PWY-7400|Reactome: R-HSA-70635 CDA09_06010 298b55ec04044eb134d7e62c0f8cb432 409 ProSitePatterns PS00565 Argininosuccinate synthase signature 2. 120 131 - T 01-11-2018 IPR018223 Argininosuccinate synthase, conserved site GO:0004055|GO:0005524|GO:0006526 KEGG: 00220+6.3.4.5|KEGG: 00250+6.3.4.5|MetaCyc: PWY-4983|MetaCyc: PWY-4984|MetaCyc: PWY-5|MetaCyc: PWY-5154|MetaCyc: PWY-7400|Reactome: R-HSA-70635 CDA09_06010 298b55ec04044eb134d7e62c0f8cb432 409 SUPERFAMILY SSF52402 5 170 7.72E-47 T 01-11-2018 CDA09_06010 298b55ec04044eb134d7e62c0f8cb432 409 TIGRFAM TIGR00032 argG: argininosuccinate synthase 6 401 2.8E-140 T 01-11-2018 IPR001518 Argininosuccinate synthase GO:0004055|GO:0005524|GO:0006526 KEGG: 00220+6.3.4.5|KEGG: 00250+6.3.4.5|MetaCyc: PWY-4983|MetaCyc: PWY-4984|MetaCyc: PWY-5|MetaCyc: PWY-5154|MetaCyc: PWY-7400|Reactome: R-HSA-70635 CDA09_06010 298b55ec04044eb134d7e62c0f8cb432 409 Pfam PF00764 Arginosuccinate synthase 8 401 8.7E-150 T 01-11-2018 IPR001518 Argininosuccinate synthase GO:0004055|GO:0005524|GO:0006526 KEGG: 00220+6.3.4.5|KEGG: 00250+6.3.4.5|MetaCyc: PWY-4983|MetaCyc: PWY-4984|MetaCyc: PWY-5|MetaCyc: PWY-5154|MetaCyc: PWY-7400|Reactome: R-HSA-70635 CDA09_06010 298b55ec04044eb134d7e62c0f8cb432 409 SUPERFAMILY SSF69864 180 404 1.44E-91 T 01-11-2018 CDA09_06010 298b55ec04044eb134d7e62c0f8cb432 409 Gene3D G3DSA:3.40.50.620 5 177 7.2E-67 T 01-11-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold CDA09_06010 298b55ec04044eb134d7e62c0f8cb432 409 ProSitePatterns PS00564 Argininosuccinate synthase signature 1. 10 18 - T 01-11-2018 IPR018223 Argininosuccinate synthase, conserved site GO:0004055|GO:0005524|GO:0006526 KEGG: 00220+6.3.4.5|KEGG: 00250+6.3.4.5|MetaCyc: PWY-4983|MetaCyc: PWY-4984|MetaCyc: PWY-5|MetaCyc: PWY-5154|MetaCyc: PWY-7400|Reactome: R-HSA-70635 CDA09_20255 656141c8f2660e2825c2703298ce490e 242 Pfam PF02683 Cytochrome C biogenesis protein transmembrane region 12 216 2.1E-14 T 01-11-2018 IPR003834 Cytochrome C biogenesis protein, transmembrane domain GO:0016020|GO:0017004|GO:0055114 CDA09_06840 bbd792a6c8c5f15ad21297860c253907 467 SUPERFAMILY SSF52540 131 370 9.29E-70 T 01-11-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CDA09_06840 bbd792a6c8c5f15ad21297860c253907 467 Gene3D G3DSA:3.40.50.300 121 300 3.0E-65 T 01-11-2018 CDA09_06840 bbd792a6c8c5f15ad21297860c253907 467 Gene3D G3DSA:3.40.50.2300 6 120 3.3E-31 T 01-11-2018 CDA09_06840 bbd792a6c8c5f15ad21297860c253907 467 Pfam PF00158 Sigma-54 interaction domain 131 295 2.9E-68 T 01-11-2018 IPR002078 RNA polymerase sigma factor 54 interaction domain GO:0005524|GO:0006355|GO:0008134 CDA09_06840 bbd792a6c8c5f15ad21297860c253907 467 Gene3D G3DSA:1.10.10.60 405 463 1.5E-12 T 01-11-2018 CDA09_06840 bbd792a6c8c5f15ad21297860c253907 467 SUPERFAMILY SSF52172 4 174 8.82E-40 T 01-11-2018 IPR011006 CheY-like superfamily CDA09_06840 bbd792a6c8c5f15ad21297860c253907 467 Gene3D G3DSA:1.10.8.60 301 376 2.0E-22 T 01-11-2018 CDA09_06840 bbd792a6c8c5f15ad21297860c253907 467 SMART SM00382 149 293 9.8E-12 T 01-11-2018 IPR003593 AAA+ ATPase domain CDA09_06840 bbd792a6c8c5f15ad21297860c253907 467 SUPERFAMILY SSF46689 341 460 2.3E-12 T 01-11-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 CDA09_06840 bbd792a6c8c5f15ad21297860c253907 467 PRINTS PR01590 FIS bacterial regulatory protein HTH signature 426 443 3.0E-5 T 01-11-2018 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 CDA09_06840 bbd792a6c8c5f15ad21297860c253907 467 PRINTS PR01590 FIS bacterial regulatory protein HTH signature 443 463 3.0E-5 T 01-11-2018 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 CDA09_06840 bbd792a6c8c5f15ad21297860c253907 467 SMART SM00448 5 116 1.2E-30 T 01-11-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 CDA09_06840 bbd792a6c8c5f15ad21297860c253907 467 Pfam PF00072 Response regulator receiver domain 7 116 5.2E-24 T 01-11-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 CDA09_06840 bbd792a6c8c5f15ad21297860c253907 467 ProSitePatterns PS00688 Sigma-54 interaction domain C-terminal part signature. 341 350 - T 01-11-2018 IPR025944 Sigma-54 interaction domain, conserved site CDA09_06840 bbd792a6c8c5f15ad21297860c253907 467 ProSitePatterns PS00675 Sigma-54 interaction domain ATP-binding region A signature. 153 166 - T 01-11-2018 IPR025662 Sigma-54 interaction domain, ATP-binding site 1 CDA09_06840 bbd792a6c8c5f15ad21297860c253907 467 Pfam PF02954 Bacterial regulatory protein, Fis family 421 460 4.9E-11 T 01-11-2018 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 CDA09_08410 1bce0a6b028d1cd77ded7d32b12114cd 63 Gene3D G3DSA:1.10.287.660 1 63 3.2E-27 T 01-11-2018 IPR029012 Helix hairpin bin domain superfamily CDA09_08410 1bce0a6b028d1cd77ded7d32b12114cd 63 Pfam PF05082 Rop-like 3 62 1.3E-28 T 01-11-2018 IPR007774 Putative nitrogen fixation protein CDA09_08410 1bce0a6b028d1cd77ded7d32b12114cd 63 PIRSF PIRSF037676 1 63 2.4E-25 T 01-11-2018 IPR007774 Putative nitrogen fixation protein CDA09_22200 cb9ad48174f0e0c29831e552b59f40a0 292 Pfam PF13614 AAA domain 3 158 1.9E-27 T 01-11-2018 IPR025669 AAA domain CDA09_22200 cb9ad48174f0e0c29831e552b59f40a0 292 SUPERFAMILY SSF52540 1 262 1.08E-43 T 01-11-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CDA09_22200 cb9ad48174f0e0c29831e552b59f40a0 292 Gene3D G3DSA:3.40.50.300 1 267 1.2E-48 T 01-11-2018 CDA09_02155 995f2b8dbf812cab9d27e4fc38a22bca 587 Pfam PF00750 tRNA synthetases class I (R) 304 435 1.2E-11 T 01-11-2018 IPR035684 Arginyl-tRNA synthetase, catalytic core domain KEGG: 00970+6.1.1.19 CDA09_02155 995f2b8dbf812cab9d27e4fc38a22bca 587 Pfam PF00750 tRNA synthetases class I (R) 99 174 7.5E-11 T 01-11-2018 IPR035684 Arginyl-tRNA synthetase, catalytic core domain KEGG: 00970+6.1.1.19 CDA09_02155 995f2b8dbf812cab9d27e4fc38a22bca 587 ProSitePatterns PS00178 Aminoacyl-transfer RNA synthetases class-I signature. 128 137 - T 01-11-2018 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site GO:0000166|GO:0004812|GO:0005524|GO:0006418 CDA09_02155 995f2b8dbf812cab9d27e4fc38a22bca 587 SMART SM01016 7 90 1.0E-34 T 01-11-2018 IPR005148 Arginyl tRNA synthetase N-terminal domain GO:0000166|GO:0004814|GO:0005524|GO:0005737|GO:0006420 KEGG: 00970+6.1.1.19|Reactome: R-HSA-2408517|Reactome: R-HSA-379716 CDA09_02155 995f2b8dbf812cab9d27e4fc38a22bca 587 Hamap MF_00123 Arginine--tRNA ligase [argS]. 7 587 25.803 T 01-11-2018 IPR001278 Arginine-tRNA ligase GO:0004814|GO:0005524|GO:0006420 KEGG: 00970+6.1.1.19 CDA09_02155 995f2b8dbf812cab9d27e4fc38a22bca 587 Gene3D G3DSA:1.10.730.10 465 587 4.1E-35 T 01-11-2018 CDA09_02155 995f2b8dbf812cab9d27e4fc38a22bca 587 SUPERFAMILY SSF47323 465 587 3.27E-36 T 01-11-2018 IPR009080 Aminoacyl-tRNA synthetase, class Ia, anticodon-binding GO:0000166|GO:0004812|GO:0005524|GO:0006418 CDA09_02155 995f2b8dbf812cab9d27e4fc38a22bca 587 SUPERFAMILY SSF55190 7 110 8.37E-23 T 01-11-2018 IPR036695 Arginyl tRNA synthetase N-terminal domain superfamily GO:0000166|GO:0004814|GO:0005524|GO:0005737|GO:0006420 KEGG: 00970+6.1.1.19 CDA09_02155 995f2b8dbf812cab9d27e4fc38a22bca 587 SUPERFAMILY SSF52374 116 480 5.07E-90 T 01-11-2018 CDA09_02155 995f2b8dbf812cab9d27e4fc38a22bca 587 Pfam PF03485 Arginyl tRNA synthetase N terminal domain 8 90 1.0E-24 T 01-11-2018 IPR005148 Arginyl tRNA synthetase N-terminal domain GO:0000166|GO:0004814|GO:0005524|GO:0005737|GO:0006420 KEGG: 00970+6.1.1.19|Reactome: R-HSA-2408517|Reactome: R-HSA-379716 CDA09_02155 995f2b8dbf812cab9d27e4fc38a22bca 587 SMART SM00836 470 587 3.9E-51 T 01-11-2018 IPR008909 DALR anticodon binding GO:0004814|GO:0005524|GO:0006420 CDA09_02155 995f2b8dbf812cab9d27e4fc38a22bca 587 Gene3D G3DSA:3.30.1360.70 4 107 3.0E-23 T 01-11-2018 IPR036695 Arginyl tRNA synthetase N-terminal domain superfamily GO:0000166|GO:0004814|GO:0005524|GO:0005737|GO:0006420 KEGG: 00970+6.1.1.19 CDA09_02155 995f2b8dbf812cab9d27e4fc38a22bca 587 Pfam PF05746 DALR anticodon binding domain 470 587 3.4E-35 T 01-11-2018 IPR008909 DALR anticodon binding GO:0004814|GO:0005524|GO:0006420 CDA09_02155 995f2b8dbf812cab9d27e4fc38a22bca 587 PRINTS PR01038 Arginyl-tRNA synthetase signature 339 360 4.6E-21 T 01-11-2018 IPR001278 Arginine-tRNA ligase GO:0004814|GO:0005524|GO:0006420 KEGG: 00970+6.1.1.19 CDA09_02155 995f2b8dbf812cab9d27e4fc38a22bca 587 PRINTS PR01038 Arginyl-tRNA synthetase signature 118 133 4.6E-21 T 01-11-2018 IPR001278 Arginine-tRNA ligase GO:0004814|GO:0005524|GO:0006420 KEGG: 00970+6.1.1.19 CDA09_02155 995f2b8dbf812cab9d27e4fc38a22bca 587 PRINTS PR01038 Arginyl-tRNA synthetase signature 133 149 4.6E-21 T 01-11-2018 IPR001278 Arginine-tRNA ligase GO:0004814|GO:0005524|GO:0006420 KEGG: 00970+6.1.1.19 CDA09_02155 995f2b8dbf812cab9d27e4fc38a22bca 587 PRINTS PR01038 Arginyl-tRNA synthetase signature 157 170 4.6E-21 T 01-11-2018 IPR001278 Arginine-tRNA ligase GO:0004814|GO:0005524|GO:0006420 KEGG: 00970+6.1.1.19 CDA09_02155 995f2b8dbf812cab9d27e4fc38a22bca 587 TIGRFAM TIGR00456 argS: arginine--tRNA ligase 8 587 4.3E-127 T 01-11-2018 IPR001278 Arginine-tRNA ligase GO:0004814|GO:0005524|GO:0006420 KEGG: 00970+6.1.1.19 CDA09_22465 2b5de70110b13c684136d0ee0417a48a 550 Pfam PF10531 SLBB domain 379 428 2.3E-7 T 01-11-2018 IPR019554 Soluble ligand binding domain Reactome: R-HSA-611105|Reactome: R-HSA-6799198 CDA09_22465 2b5de70110b13c684136d0ee0417a48a 550 Pfam PF10589 NADH-ubiquinone oxidoreductase-F iron-sulfur binding region 468 543 4.9E-22 T 01-11-2018 IPR019575 NADH-ubiquinone oxidoreductase 51kDa subunit, iron-sulphur binding domain GO:0051539 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 CDA09_22465 2b5de70110b13c684136d0ee0417a48a 550 SUPERFAMILY SSF52833 23 172 2.01E-34 T 01-11-2018 IPR036249 Thioredoxin-like superfamily CDA09_22465 2b5de70110b13c684136d0ee0417a48a 550 ProSitePatterns PS00644 Respiratory-chain NADH dehydrogenase 51 Kd subunit signature 1. 303 318 - T 01-11-2018 IPR001949 NADH:ubiquinone oxidoreductase, 51kDa subunit, conserved site GO:0008137|GO:0010181|GO:0051539|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 CDA09_22465 2b5de70110b13c684136d0ee0417a48a 550 Pfam PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit 196 354 3.0E-37 T 01-11-2018 IPR011538 NADH-ubiquinone oxidoreductase 51kDa subunit, FMN-binding domain Reactome: R-HSA-611105|Reactome: R-HSA-6799198 CDA09_22465 2b5de70110b13c684136d0ee0417a48a 550 Gene3D G3DSA:3.10.20.600 368 461 1.3E-24 T 01-11-2018 CDA09_22465 2b5de70110b13c684136d0ee0417a48a 550 Gene3D G3DSA:3.40.50.11540 199 367 5.3E-63 T 01-11-2018 IPR037225 NADH-ubiquinone oxidoreductase 51kDa subunit, FMN-binding domain superfamily Reactome: R-HSA-611105|Reactome: R-HSA-6799198 CDA09_22465 2b5de70110b13c684136d0ee0417a48a 550 SUPERFAMILY SSF142019 161 375 1.44E-63 T 01-11-2018 IPR037225 NADH-ubiquinone oxidoreductase 51kDa subunit, FMN-binding domain superfamily Reactome: R-HSA-611105|Reactome: R-HSA-6799198 CDA09_22465 2b5de70110b13c684136d0ee0417a48a 550 Pfam PF01257 Thioredoxin-like [2Fe-2S] ferredoxin 24 151 6.9E-24 T 01-11-2018 CDA09_22465 2b5de70110b13c684136d0ee0417a48a 550 Gene3D G3DSA:3.40.30.10 81 152 8.7E-10 T 01-11-2018 CDA09_22465 2b5de70110b13c684136d0ee0417a48a 550 SUPERFAMILY SSF140490 468 542 1.44E-23 T 01-11-2018 IPR037207 NADH-ubiquinone oxidoreductase 51kDa subunit, iron-sulphur binding domain superfamily Reactome: R-HSA-611105|Reactome: R-HSA-6799198 CDA09_22465 2b5de70110b13c684136d0ee0417a48a 550 Gene3D G3DSA:1.20.1440.230 464 550 5.9E-23 T 01-11-2018 IPR037207 NADH-ubiquinone oxidoreductase 51kDa subunit, iron-sulphur binding domain superfamily Reactome: R-HSA-611105|Reactome: R-HSA-6799198 CDA09_22465 2b5de70110b13c684136d0ee0417a48a 550 SUPERFAMILY SSF142984 377 459 1.83E-20 T 01-11-2018 CDA09_22465 2b5de70110b13c684136d0ee0417a48a 550 SMART SM00928 465 510 2.9E-16 T 01-11-2018 IPR019575 NADH-ubiquinone oxidoreductase 51kDa subunit, iron-sulphur binding domain GO:0051539 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 CDA09_22465 2b5de70110b13c684136d0ee0417a48a 550 ProSitePatterns PS00645 Respiratory-chain NADH dehydrogenase 51 Kd subunit signature 2. 478 489 - T 01-11-2018 IPR001949 NADH:ubiquinone oxidoreductase, 51kDa subunit, conserved site GO:0008137|GO:0010181|GO:0051539|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 CDA09_22465 2b5de70110b13c684136d0ee0417a48a 550 Gene3D G3DSA:1.10.10.1590 18 75 5.4E-9 T 01-11-2018 CDA09_00980 fc0e75da34714d8cc69b679b86d546c0 471 SMART SM00388 255 319 1.8E-9 T 01-11-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 CDA09_00980 fc0e75da34714d8cc69b679b86d546c0 471 Gene3D G3DSA:3.30.565.10 318 471 1.2E-35 T 01-11-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily CDA09_00980 fc0e75da34714d8cc69b679b86d546c0 471 SUPERFAMILY SSF55874 309 467 6.16E-32 T 01-11-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily CDA09_00980 fc0e75da34714d8cc69b679b86d546c0 471 Gene3D G3DSA:1.10.287.130 239 316 9.2E-13 T 01-11-2018 CDA09_00980 fc0e75da34714d8cc69b679b86d546c0 471 PRINTS PR00344 Bacterial sensor protein C-terminal signature 400 414 2.7E-11 T 01-11-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 CDA09_00980 fc0e75da34714d8cc69b679b86d546c0 471 PRINTS PR00344 Bacterial sensor protein C-terminal signature 429 447 2.7E-11 T 01-11-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 CDA09_00980 fc0e75da34714d8cc69b679b86d546c0 471 PRINTS PR00344 Bacterial sensor protein C-terminal signature 453 466 2.7E-11 T 01-11-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 CDA09_00980 fc0e75da34714d8cc69b679b86d546c0 471 PRINTS PR00344 Bacterial sensor protein C-terminal signature 418 428 2.7E-11 T 01-11-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 CDA09_00980 fc0e75da34714d8cc69b679b86d546c0 471 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 366 467 1.6E-18 T 01-11-2018 IPR003594 Histidine kinase/HSP90-like ATPase CDA09_00980 fc0e75da34714d8cc69b679b86d546c0 471 SMART SM00387 362 469 2.5E-27 T 01-11-2018 IPR003594 Histidine kinase/HSP90-like ATPase CDA09_00980 fc0e75da34714d8cc69b679b86d546c0 471 SUPERFAMILY SSF47384 251 315 1.73E-10 T 01-11-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 CDA09_00980 fc0e75da34714d8cc69b679b86d546c0 471 Pfam PF00512 His Kinase A (phospho-acceptor) domain 255 315 1.5E-10 T 01-11-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 CDA09_04655 aa369c8f790ab503046dabd0b8ea1ab0 420 SUPERFAMILY SSF51905 1 415 3.63E-43 T 01-11-2018 IPR036188 FAD/NAD(P)-binding domain superfamily CDA09_04655 aa369c8f790ab503046dabd0b8ea1ab0 420 Hamap MF_01202 D-amino acid dehydrogenase [dadA]. 1 416 46.3 T 01-11-2018 IPR023080 D-amino acid dehydrogenase DadA GO:0008718|GO:0019478|GO:0055114 CDA09_04655 aa369c8f790ab503046dabd0b8ea1ab0 420 Gene3D G3DSA:3.30.9.10 134 364 1.1E-46 T 01-11-2018 CDA09_04655 aa369c8f790ab503046dabd0b8ea1ab0 420 Gene3D G3DSA:3.50.50.60 101 404 1.1E-46 T 01-11-2018 IPR036188 FAD/NAD(P)-binding domain superfamily CDA09_04655 aa369c8f790ab503046dabd0b8ea1ab0 420 Gene3D G3DSA:3.50.50.60 3 73 3.3E-11 T 01-11-2018 IPR036188 FAD/NAD(P)-binding domain superfamily CDA09_04655 aa369c8f790ab503046dabd0b8ea1ab0 420 SUPERFAMILY SSF54373 275 365 9.55E-16 T 01-11-2018 CDA09_04655 aa369c8f790ab503046dabd0b8ea1ab0 420 Pfam PF01266 FAD dependent oxidoreductase 2 403 2.2E-62 T 01-11-2018 IPR006076 FAD dependent oxidoreductase GO:0016491|GO:0055114 CDA09_03065 f922d8ab707ccb1140c66ab67662aa00 440 Gene3D G3DSA:3.40.190.10 156 430 1.7E-74 T 01-11-2018 CDA09_03065 f922d8ab707ccb1140c66ab67662aa00 440 Pfam PF13416 Bacterial extracellular solute-binding protein 65 357 1.2E-26 T 01-11-2018 IPR006059 Bacterial extracellular solute-binding protein CDA09_03065 f922d8ab707ccb1140c66ab67662aa00 440 SUPERFAMILY SSF53850 48 432 5.43E-42 T 01-11-2018 CDA09_03065 f922d8ab707ccb1140c66ab67662aa00 440 Gene3D G3DSA:3.40.190.10 53 390 1.7E-74 T 01-11-2018 CDA09_00860 0b28cdb13cef68e57934b14a1f5cd76a 991 SUPERFAMILY SSF69255 412 520 8.11E-22 T 01-11-2018 CDA09_00860 0b28cdb13cef68e57934b14a1f5cd76a 991 Pfam PF05954 Phage late control gene D protein (GPD) 51 364 1.3E-76 T 01-11-2018 CDA09_00860 0b28cdb13cef68e57934b14a1f5cd76a 991 TIGRFAM TIGR01646 vgr_GE: Rhs element Vgr protein 52 599 6.7E-76 T 01-11-2018 IPR006533 Type VI secretion system, RhsGE-associated Vgr protein CDA09_00860 0b28cdb13cef68e57934b14a1f5cd76a 991 Gene3D G3DSA:2.30.110.50 25 364 1.2E-83 T 01-11-2018 CDA09_00860 0b28cdb13cef68e57934b14a1f5cd76a 991 Gene3D G3DSA:2.40.50.230 406 524 2.2E-33 T 01-11-2018 IPR037026 Vgr protein, OB-fold domain superfamily CDA09_00860 0b28cdb13cef68e57934b14a1f5cd76a 991 Pfam PF10106 Uncharacterized protein conserved in bacteria (DUF2345) 726 885 2.2E-38 T 01-11-2018 IPR018769 Domain of unknown function DUF2345, Vgr C-terminal CDA09_00860 0b28cdb13cef68e57934b14a1f5cd76a 991 SUPERFAMILY SSF69279 21 216 6.23E-45 T 01-11-2018 CDA09_00860 0b28cdb13cef68e57934b14a1f5cd76a 991 SUPERFAMILY SSF69279 232 401 2.72E-18 T 01-11-2018 CDA09_00860 0b28cdb13cef68e57934b14a1f5cd76a 991 Pfam PF13296 Putative type VI secretion system Rhs element Vgr 579 681 2.5E-33 T 01-11-2018 IPR028244 Putative type VI secretion system, Rhs element associated Vgr domain CDA09_00860 0b28cdb13cef68e57934b14a1f5cd76a 991 Gene3D G3DSA:3.30.1920.30 253 317 1.2E-83 T 01-11-2018 CDA09_00860 0b28cdb13cef68e57934b14a1f5cd76a 991 TIGRFAM TIGR03361 VI_Rhs_Vgr: type VI secretion system Vgr family protein 21 527 3.0E-89 T 01-11-2018 IPR017847 Type VI secretion system, RhsGE-associated Vgr family subset CDA09_00860 0b28cdb13cef68e57934b14a1f5cd76a 991 Gene3D G3DSA:3.55.50.10 116 220 1.2E-83 T 01-11-2018 CDA09_12075 03d5cf7af061a7da9e4c1b2e485e0b19 323 Pfam PF02653 Branched-chain amino acid transport system / permease component 30 296 6.1E-40 T 01-11-2018 IPR001851 ABC transporter, permease GO:0016020|GO:0022857|GO:0055085 CDA09_02925 a2edfe41124a0311d8ae3ba0adfbbff2 233 Pfam PF01464 Transglycosylase SLT domain 112 204 8.2E-26 T 01-11-2018 IPR008258 Transglycosylase SLT domain 1 CDA09_02925 a2edfe41124a0311d8ae3ba0adfbbff2 233 Gene3D G3DSA:1.10.530.10 94 232 1.7E-40 T 01-11-2018 CDA09_02925 a2edfe41124a0311d8ae3ba0adfbbff2 233 SUPERFAMILY SSF53955 93 230 9.65E-45 T 01-11-2018 IPR023346 Lysozyme-like domain superfamily CDA09_06255 cf136c4b02b5cde026b0dda836ed23d9 376 Pfam PF07690 Major Facilitator Superfamily 238 372 6.6E-11 T 01-11-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 CDA09_06255 cf136c4b02b5cde026b0dda836ed23d9 376 Pfam PF07690 Major Facilitator Superfamily 4 224 3.4E-22 T 01-11-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 CDA09_06255 cf136c4b02b5cde026b0dda836ed23d9 376 Gene3D G3DSA:1.20.1250.20 1 374 9.6E-48 T 01-11-2018 CDA09_06255 cf136c4b02b5cde026b0dda836ed23d9 376 SUPERFAMILY SSF103473 2 373 1.83E-53 T 01-11-2018 IPR036259 MFS transporter superfamily CDA09_06235 960e9eb364757cc50d8ae3f4eef3dd75 381 Gene3D G3DSA:2.40.420.20 292 360 2.6E-73 T 01-11-2018 CDA09_06235 960e9eb364757cc50d8ae3f4eef3dd75 381 Gene3D G3DSA:1.10.287.470 115 174 2.6E-73 T 01-11-2018 CDA09_06235 960e9eb364757cc50d8ae3f4eef3dd75 381 Pfam PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion 66 281 1.7E-31 T 01-11-2018 IPR032317 RND efflux pump, membrane fusion protein, barrel-sandwich domain CDA09_06235 960e9eb364757cc50d8ae3f4eef3dd75 381 SUPERFAMILY SSF111369 71 285 4.71E-42 T 01-11-2018 CDA09_06235 960e9eb364757cc50d8ae3f4eef3dd75 381 TIGRFAM TIGR01730 RND_mfp: efflux transporter, RND family, MFP subunit 56 362 2.7E-79 T 01-11-2018 IPR006143 RND efflux pump, membrane fusion protein GO:0005215|GO:0016020|GO:0055085 CDA09_06235 960e9eb364757cc50d8ae3f4eef3dd75 381 Gene3D G3DSA:2.40.50.100 80 208 2.6E-73 T 01-11-2018 CDA09_06235 960e9eb364757cc50d8ae3f4eef3dd75 381 Gene3D G3DSA:2.40.30.170 69 291 2.6E-73 T 01-11-2018 CDA09_03160 fa80c840c819269d5a51df89f02d2118 431 Gene3D G3DSA:1.20.1600.10 10 427 3.6E-47 T 01-11-2018 CDA09_03160 fa80c840c819269d5a51df89f02d2118 431 Pfam PF02321 Outer membrane efflux protein 40 225 5.5E-11 T 01-11-2018 IPR003423 Outer membrane efflux protein GO:0015562|GO:0055085 CDA09_03160 fa80c840c819269d5a51df89f02d2118 431 Pfam PF02321 Outer membrane efflux protein 251 423 1.4E-20 T 01-11-2018 IPR003423 Outer membrane efflux protein GO:0015562|GO:0055085 CDA09_03160 fa80c840c819269d5a51df89f02d2118 431 SUPERFAMILY SSF56954 11 423 3.92E-54 T 01-11-2018 CDA09_01880 eb72b10877cb36b85e72ded824a0eff8 425 Gene3D G3DSA:3.40.50.2300 1 126 1.6E-23 T 01-11-2018 CDA09_01880 eb72b10877cb36b85e72ded824a0eff8 425 Pfam PF00563 EAL domain 139 372 1.8E-67 T 01-11-2018 IPR001633 EAL domain CDA09_01880 eb72b10877cb36b85e72ded824a0eff8 425 Pfam PF00072 Response regulator receiver domain 3 119 2.0E-15 T 01-11-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 CDA09_01880 eb72b10877cb36b85e72ded824a0eff8 425 SUPERFAMILY SSF52172 1 126 3.84E-21 T 01-11-2018 IPR011006 CheY-like superfamily CDA09_01880 eb72b10877cb36b85e72ded824a0eff8 425 Gene3D G3DSA:3.20.20.450 135 385 1.2E-85 T 01-11-2018 IPR035919 EAL domain superfamily CDA09_01880 eb72b10877cb36b85e72ded824a0eff8 425 SMART SM00448 1 119 2.3E-14 T 01-11-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 CDA09_01880 eb72b10877cb36b85e72ded824a0eff8 425 SMART SM00052 133 378 9.7E-91 T 01-11-2018 IPR001633 EAL domain CDA09_01880 eb72b10877cb36b85e72ded824a0eff8 425 SUPERFAMILY SSF141868 139 387 5.23E-79 T 01-11-2018 IPR035919 EAL domain superfamily CDA09_09395 c2ebc26833dc1526d5611bf39274020f 375 Gene3D G3DSA:1.20.140.10 222 360 1.3E-26 T 01-11-2018 CDA09_09395 c2ebc26833dc1526d5611bf39274020f 375 Pfam PF02771 Acyl-CoA dehydrogenase, N-terminal domain 6 104 1.4E-11 T 01-11-2018 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal GO:0016627|GO:0050660|GO:0055114 CDA09_09395 c2ebc26833dc1526d5611bf39274020f 375 SUPERFAMILY SSF47203 224 356 4.51E-27 T 01-11-2018 IPR036250 Acyl-CoA dehydrogenase-like, C-terminal GO:0016627|GO:0055114 CDA09_09395 c2ebc26833dc1526d5611bf39274020f 375 Pfam PF00441 Acyl-CoA dehydrogenase, C-terminal domain 225 344 8.0E-21 T 01-11-2018 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal GO:0016627|GO:0055114 CDA09_09395 c2ebc26833dc1526d5611bf39274020f 375 SUPERFAMILY SSF56645 1 211 3.53E-29 T 01-11-2018 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain superfamily GO:0016627|GO:0055114 CDA09_09395 c2ebc26833dc1526d5611bf39274020f 375 Gene3D G3DSA:1.10.540.10 1 116 3.8E-22 T 01-11-2018 IPR037069 Acyl-CoA dehydrogenase/oxidase, N-terminal domain superfamily GO:0016627|GO:0050660|GO:0055114 CDA09_09395 c2ebc26833dc1526d5611bf39274020f 375 Gene3D G3DSA:2.40.110.10 119 218 3.0E-11 T 01-11-2018 CDA09_03500 da64a785fccd431c5d00233e5bbb8a96 685 Pfam PF00679 Elongation factor G C-terminus 585 671 6.6E-20 T 01-11-2018 IPR000640 Elongation factor EFG, domain V-like CDA09_03500 da64a785fccd431c5d00233e5bbb8a96 685 Gene3D G3DSA:3.40.50.300 3 266 2.6E-48 T 01-11-2018 CDA09_03500 da64a785fccd431c5d00233e5bbb8a96 685 SUPERFAMILY SSF54980 587 675 1.34E-15 T 01-11-2018 IPR035647 EF-G domain III/V-like CDA09_03500 da64a785fccd431c5d00233e5bbb8a96 685 SMART SM00889 464 582 2.7E-54 T 01-11-2018 IPR005517 Translation elongation factor EFG/EF2, domain IV GO:0005525 CDA09_03500 da64a785fccd431c5d00233e5bbb8a96 685 Gene3D G3DSA:3.30.230.10 468 671 3.7E-66 T 01-11-2018 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup CDA09_03500 da64a785fccd431c5d00233e5bbb8a96 685 SUPERFAMILY SSF52540 6 261 7.06E-58 T 01-11-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CDA09_03500 da64a785fccd431c5d00233e5bbb8a96 685 Pfam PF03764 Elongation factor G, domain IV 463 581 3.0E-37 T 01-11-2018 IPR005517 Translation elongation factor EFG/EF2, domain IV GO:0005525 CDA09_03500 da64a785fccd431c5d00233e5bbb8a96 685 Gene3D G3DSA:2.40.30.10 273 389 2.5E-18 T 01-11-2018 CDA09_03500 da64a785fccd431c5d00233e5bbb8a96 685 SUPERFAMILY SSF54211 463 583 1.52E-37 T 01-11-2018 IPR020568 Ribosomal protein S5 domain 2-type fold CDA09_03500 da64a785fccd431c5d00233e5bbb8a96 685 Gene3D G3DSA:3.30.70.240 588 659 3.7E-66 T 01-11-2018 CDA09_03500 da64a785fccd431c5d00233e5bbb8a96 685 Pfam PF00009 Elongation factor Tu GTP binding domain 8 261 3.1E-27 T 01-11-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 CDA09_03500 da64a785fccd431c5d00233e5bbb8a96 685 SMART SM00838 584 672 3.0E-10 T 01-11-2018 IPR000640 Elongation factor EFG, domain V-like CDA09_03500 da64a785fccd431c5d00233e5bbb8a96 685 Gene3D G3DSA:3.30.70.870 390 467 1.5E-21 T 01-11-2018 CDA09_03500 da64a785fccd431c5d00233e5bbb8a96 685 Pfam PF14492 Elongation Factor G, domain II 389 460 1.2E-20 T 01-11-2018 CDA09_03500 da64a785fccd431c5d00233e5bbb8a96 685 SUPERFAMILY SSF54980 388 466 1.12E-16 T 01-11-2018 IPR035647 EF-G domain III/V-like CDA09_03500 da64a785fccd431c5d00233e5bbb8a96 685 SUPERFAMILY SSF50447 245 380 9.79E-23 T 01-11-2018 IPR009000 Translation protein, beta-barrel domain superfamily CDA09_02110 17896cf5afa715c0e118602a648ec699 796 Gene3D G3DSA:3.30.365.10 33 293 7.1E-122 T 01-11-2018 CDA09_02110 17896cf5afa715c0e118602a648ec699 796 SUPERFAMILY SSF56003 145 776 1.19E-181 T 01-11-2018 IPR037165 Aldehyde oxidase/xanthine dehydrogenase, molybdopterin binding domain superfamily GO:0016491|GO:0055114 CDA09_02110 17896cf5afa715c0e118602a648ec699 796 Gene3D G3DSA:3.90.1170.50 50 141 7.1E-122 T 01-11-2018 CDA09_02110 17896cf5afa715c0e118602a648ec699 796 TIGRFAM TIGR03194 4hydrxCoA_A: 4-hydroxybenzoyl-CoA reductase, alpha subunit 25 774 0.0 T 01-11-2018 IPR017607 4-hydroxybenzoyl-CoA reductase, alpha subunit KEGG: 00362+1.3.7.9|KEGG: 00627+1.3.7.9|MetaCyc: PWY-6080|MetaCyc: PWY-7046 CDA09_02110 17896cf5afa715c0e118602a648ec699 796 Gene3D G3DSA:3.30.365.10 142 369 7.1E-122 T 01-11-2018 CDA09_02110 17896cf5afa715c0e118602a648ec699 796 Gene3D G3DSA:3.30.365.10 380 770 9.9E-133 T 01-11-2018 CDA09_02110 17896cf5afa715c0e118602a648ec699 796 Pfam PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase 157 715 3.0E-156 T 01-11-2018 IPR008274 Aldehyde oxidase/xanthine dehydrogenase, molybdopterin binding GO:0016491|GO:0055114 CDA09_02110 17896cf5afa715c0e118602a648ec699 796 Pfam PF01315 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain 35 141 2.2E-25 T 01-11-2018 IPR000674 Aldehyde oxidase/xanthine dehydrogenase, a/b hammerhead CDA09_02110 17896cf5afa715c0e118602a648ec699 796 Gene3D G3DSA:3.30.365.10 460 631 9.9E-133 T 01-11-2018 CDA09_02110 17896cf5afa715c0e118602a648ec699 796 SMART SM01008 35 141 1.2E-32 T 01-11-2018 IPR000674 Aldehyde oxidase/xanthine dehydrogenase, a/b hammerhead CDA09_02110 17896cf5afa715c0e118602a648ec699 796 SUPERFAMILY SSF54665 17 163 1.19E-34 T 01-11-2018 IPR036856 Aldehyde oxidase/xanthine dehydrogenase, a/b hammerhead superfamily CDA09_22850 64c92734e5d45fe9e7970cea5654ed88 348 Pfam PF01594 AI-2E family transporter 27 341 2.6E-13 T 01-11-2018 IPR002549 Transmembrane protein TqsA-like CDA09_20795 8bd7dbb25c179dec51cf0aca116ab8c1 242 SUPERFAMILY SSF52540 13 233 1.26E-55 T 01-11-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CDA09_20795 8bd7dbb25c179dec51cf0aca116ab8c1 242 Pfam PF00005 ABC transporter 29 170 4.5E-24 T 01-11-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 CDA09_20795 8bd7dbb25c179dec51cf0aca116ab8c1 242 Gene3D G3DSA:3.40.50.300 10 241 2.1E-54 T 01-11-2018 CDA09_20795 8bd7dbb25c179dec51cf0aca116ab8c1 242 SMART SM00382 38 221 3.8E-10 T 01-11-2018 IPR003593 AAA+ ATPase domain CDA09_20795 8bd7dbb25c179dec51cf0aca116ab8c1 242 ProSitePatterns PS00211 ABC transporters family signature. 143 157 - T 01-11-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 CDA09_00225 539c31b713b6ce9e24a4b61dc3f8a490 499 SUPERFAMILY SSF50156 254 379 3.02E-26 T 01-11-2018 IPR036034 PDZ superfamily GO:0005515 CDA09_00225 539c31b713b6ce9e24a4b61dc3f8a490 499 SUPERFAMILY SSF50156 414 498 2.23E-16 T 01-11-2018 IPR036034 PDZ superfamily GO:0005515 CDA09_00225 539c31b713b6ce9e24a4b61dc3f8a490 499 Pfam PF13365 Trypsin-like peptidase domain 123 257 7.2E-34 T 01-11-2018 CDA09_00225 539c31b713b6ce9e24a4b61dc3f8a490 499 Pfam PF13180 PDZ domain 297 387 3.0E-15 T 01-11-2018 IPR001478 PDZ domain GO:0005515 CDA09_00225 539c31b713b6ce9e24a4b61dc3f8a490 499 Pfam PF13180 PDZ domain 435 489 1.9E-6 T 01-11-2018 IPR001478 PDZ domain GO:0005515 CDA09_00225 539c31b713b6ce9e24a4b61dc3f8a490 499 PRINTS PR00834 HtrA/DegQ protease family signature 250 267 2.4E-52 T 01-11-2018 IPR001940 Peptidase S1C GO:0004252|GO:0006508 CDA09_00225 539c31b713b6ce9e24a4b61dc3f8a490 499 PRINTS PR00834 HtrA/DegQ protease family signature 194 218 2.4E-52 T 01-11-2018 IPR001940 Peptidase S1C GO:0004252|GO:0006508 CDA09_00225 539c31b713b6ce9e24a4b61dc3f8a490 499 PRINTS PR00834 HtrA/DegQ protease family signature 228 245 2.4E-52 T 01-11-2018 IPR001940 Peptidase S1C GO:0004252|GO:0006508 CDA09_00225 539c31b713b6ce9e24a4b61dc3f8a490 499 PRINTS PR00834 HtrA/DegQ protease family signature 132 144 2.4E-52 T 01-11-2018 IPR001940 Peptidase S1C GO:0004252|GO:0006508 CDA09_00225 539c31b713b6ce9e24a4b61dc3f8a490 499 PRINTS PR00834 HtrA/DegQ protease family signature 154 174 2.4E-52 T 01-11-2018 IPR001940 Peptidase S1C GO:0004252|GO:0006508 CDA09_00225 539c31b713b6ce9e24a4b61dc3f8a490 499 PRINTS PR00834 HtrA/DegQ protease family signature 336 348 2.4E-52 T 01-11-2018 IPR001940 Peptidase S1C GO:0004252|GO:0006508 CDA09_00225 539c31b713b6ce9e24a4b61dc3f8a490 499 Gene3D G3DSA:2.30.42.10 291 396 2.8E-28 T 01-11-2018 CDA09_00225 539c31b713b6ce9e24a4b61dc3f8a490 499 Gene3D G3DSA:2.30.42.10 418 498 8.2E-19 T 01-11-2018 CDA09_00225 539c31b713b6ce9e24a4b61dc3f8a490 499 Gene3D G3DSA:2.40.10.120 49 290 3.7E-80 T 01-11-2018 CDA09_00225 539c31b713b6ce9e24a4b61dc3f8a490 499 TIGRFAM TIGR02037 degP_htrA_DO: peptidase Do 50 494 3.0E-149 T 01-11-2018 IPR011782 Peptidase S1C, Do GO:0004252|GO:0006508 CDA09_00225 539c31b713b6ce9e24a4b61dc3f8a490 499 SUPERFAMILY SSF50494 48 288 7.81E-67 T 01-11-2018 IPR009003 Peptidase S1, PA clan CDA09_00225 539c31b713b6ce9e24a4b61dc3f8a490 499 SMART SM00228 296 378 1.5E-14 T 01-11-2018 IPR001478 PDZ domain GO:0005515 CDA09_00225 539c31b713b6ce9e24a4b61dc3f8a490 499 SMART SM00228 413 489 6.7E-9 T 01-11-2018 IPR001478 PDZ domain GO:0005515 CDA09_01690 e081b6e4d6dbe6472cb55ed225a245eb 440 Gene3D G3DSA:3.40.50.12780 4 330 2.5E-142 T 01-11-2018 CDA09_01690 e081b6e4d6dbe6472cb55ed225a245eb 440 Pfam PF14535 AMP-binding enzyme C-terminal domain 339 437 2.8E-22 T 01-11-2018 IPR028154 AMP-dependent ligase, C-terminal CDA09_01690 e081b6e4d6dbe6472cb55ed225a245eb 440 SUPERFAMILY SSF56801 21 416 8.63E-64 T 01-11-2018 CDA09_01690 e081b6e4d6dbe6472cb55ed225a245eb 440 PIRSF PIRSF006444 6 439 4.9E-206 T 01-11-2018 IPR011880 Phenylacetate-CoA ligase GO:0010124|GO:0047475 KEGG: 00360+6.2.1.30|MetaCyc: PWY-1341|MetaCyc: PWY-6318|MetaCyc: PWY-7716 CDA09_01690 e081b6e4d6dbe6472cb55ed225a245eb 440 Pfam PF00501 AMP-binding enzyme 91 293 4.5E-16 T 01-11-2018 IPR000873 AMP-dependent synthetase/ligase GO:0003824 CDA09_01690 e081b6e4d6dbe6472cb55ed225a245eb 440 Gene3D G3DSA:3.30.300.30 331 438 2.2E-27 T 01-11-2018 CDA09_01690 e081b6e4d6dbe6472cb55ed225a245eb 440 TIGRFAM TIGR02155 PA_CoA_ligase: phenylacetate-CoA ligase 15 437 3.8E-232 T 01-11-2018 IPR011880 Phenylacetate-CoA ligase GO:0010124|GO:0047475 KEGG: 00360+6.2.1.30|MetaCyc: PWY-1341|MetaCyc: PWY-6318|MetaCyc: PWY-7716 CDA09_16815 5c98fd8eccee6030599503980357a53d 131 Pfam PF04247 Invasion gene expression up-regulator, SirB 2 121 2.3E-41 T 01-11-2018 IPR007360 Invasion gene expression up-regulator, SirB CDA09_16815 5c98fd8eccee6030599503980357a53d 131 PIRSF PIRSF005610 1 119 8.8E-25 T 01-11-2018 IPR007360 Invasion gene expression up-regulator, SirB CDA09_15825 cd768d4922ad378546cbc3109dca9663 468 SMART SM00670 12 147 1.2E-11 T 01-11-2018 IPR002716 PIN domain CDA09_15825 cd768d4922ad378546cbc3109dca9663 468 Gene3D G3DSA:3.40.50.300 253 467 1.7E-66 T 01-11-2018 CDA09_15825 cd768d4922ad378546cbc3109dca9663 468 Gene3D G3DSA:3.40.50.1010 9 162 1.2E-23 T 01-11-2018 CDA09_15825 cd768d4922ad378546cbc3109dca9663 468 SUPERFAMILY SSF52540 139 448 2.38E-30 T 01-11-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CDA09_15825 cd768d4922ad378546cbc3109dca9663 468 Pfam PF02562 PhoH-like protein 255 462 1.2E-54 T 01-11-2018 IPR003714 PhoH-like protein GO:0005524 CDA09_15825 cd768d4922ad378546cbc3109dca9663 468 Pfam PF13638 PIN domain 14 159 2.2E-39 T 01-11-2018 IPR002716 PIN domain CDA09_15825 cd768d4922ad378546cbc3109dca9663 468 SUPERFAMILY SSF88723 13 164 5.1E-10 T 01-11-2018 IPR029060 PIN-like domain superfamily CDA09_12755 d0720dfc0bd4e8aa650768a5ad8c2bd4 310 SUPERFAMILY SSF52402 3 183 6.98E-57 T 01-11-2018 CDA09_12755 d0720dfc0bd4e8aa650768a5ad8c2bd4 310 SUPERFAMILY SSF52467 188 308 5.82E-48 T 01-11-2018 IPR029035 DHS-like NAD/FAD-binding domain superfamily CDA09_12755 d0720dfc0bd4e8aa650768a5ad8c2bd4 310 PIRSF PIRSF000089 1 310 3.8E-107 T 01-11-2018 IPR001308 Electron transfer flavoprotein alpha subunit/FixB GO:0009055|GO:0050660 Reactome: R-HSA-611105 CDA09_12755 d0720dfc0bd4e8aa650768a5ad8c2bd4 310 SMART SM00893 3 181 1.2E-54 T 01-11-2018 IPR014730 Electron transfer flavoprotein, alpha/beta-subunit, N-terminal Reactome: R-HSA-611105 CDA09_12755 d0720dfc0bd4e8aa650768a5ad8c2bd4 310 Pfam PF00766 Electron transfer flavoprotein FAD-binding domain 189 272 1.9E-35 T 01-11-2018 IPR014731 Electron transfer flavoprotein, alpha subunit, C-terminal Reactome: R-HSA-611105 CDA09_12755 d0720dfc0bd4e8aa650768a5ad8c2bd4 310 ProSitePatterns PS00696 Electron transfer flavoprotein alpha-subunit signature. 253 279 - T 01-11-2018 IPR018206 Electron transfer flavoprotein subunit alpha, conserved site Reactome: R-HSA-611105 CDA09_12755 d0720dfc0bd4e8aa650768a5ad8c2bd4 310 Gene3D G3DSA:3.40.50.620 2 181 5.8E-54 T 01-11-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold CDA09_12755 d0720dfc0bd4e8aa650768a5ad8c2bd4 310 Gene3D G3DSA:3.40.50.1220 183 310 8.5E-58 T 01-11-2018 CDA09_12755 d0720dfc0bd4e8aa650768a5ad8c2bd4 310 Pfam PF01012 Electron transfer flavoprotein domain 4 170 1.1E-39 T 01-11-2018 IPR014730 Electron transfer flavoprotein, alpha/beta-subunit, N-terminal Reactome: R-HSA-611105 CDA09_10300 ff706c7c9c775b94edc83365b139ad92 261 Gene3D G3DSA:3.30.450.40 75 259 1.1E-32 T 01-11-2018 IPR029016 GAF-like domain superfamily CDA09_10300 ff706c7c9c775b94edc83365b139ad92 261 SUPERFAMILY SSF46785 4 55 7.21E-9 T 01-11-2018 IPR036390 Winged helix DNA-binding domain superfamily CDA09_10300 ff706c7c9c775b94edc83365b139ad92 261 Gene3D G3DSA:1.10.10.10 1 67 1.1E-12 T 01-11-2018 IPR036388 Winged helix-like DNA-binding domain superfamily CDA09_10300 ff706c7c9c775b94edc83365b139ad92 261 SUPERFAMILY SSF55781 78 258 4.38E-20 T 01-11-2018 CDA09_10300 ff706c7c9c775b94edc83365b139ad92 261 SMART SM00346 4 93 5.8E-6 T 01-11-2018 IPR005471 Transcription regulator IclR, N-terminal GO:0003677|GO:0006355 CDA09_10300 ff706c7c9c775b94edc83365b139ad92 261 Pfam PF01614 Bacterial transcriptional regulator 125 257 3.8E-6 T 01-11-2018 IPR014757 Transcription regulator IclR, C-terminal CDA09_10300 ff706c7c9c775b94edc83365b139ad92 261 Pfam PF09339 IclR helix-turn-helix domain 6 51 4.6E-11 T 01-11-2018 IPR005471 Transcription regulator IclR, N-terminal GO:0003677|GO:0006355 CDA09_05885 61508ffcb9ef78f02e66f49f209963e1 512 SUPERFAMILY SSF103473 4 506 1.83E-66 T 01-11-2018 IPR036259 MFS transporter superfamily CDA09_05885 61508ffcb9ef78f02e66f49f209963e1 512 TIGRFAM TIGR00711 efflux_EmrB: drug resistance MFS transporter, drug:H+ antiporter-2 (14 Spanner) (DHA2) family 20 495 8.4E-129 T 01-11-2018 IPR004638 Drug resistance transporter EmrB/QacA subfamily GO:0016021|GO:0022857|GO:0055085 CDA09_05885 61508ffcb9ef78f02e66f49f209963e1 512 Pfam PF07690 Major Facilitator Superfamily 25 417 1.3E-50 T 01-11-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 CDA09_05885 61508ffcb9ef78f02e66f49f209963e1 512 Gene3D G3DSA:1.20.1720.10 21 262 5.1E-45 T 01-11-2018 CDA09_05885 61508ffcb9ef78f02e66f49f209963e1 512 PRINTS PR01036 Tetracycline resistance protein TetB signature 114 134 2.4E-5 T 01-11-2018 CDA09_05885 61508ffcb9ef78f02e66f49f209963e1 512 PRINTS PR01036 Tetracycline resistance protein TetB signature 144 168 2.4E-5 T 01-11-2018 CDA09_05885 61508ffcb9ef78f02e66f49f209963e1 512 PRINTS PR01036 Tetracycline resistance protein TetB signature 23 47 2.4E-5 T 01-11-2018 CDA09_05885 61508ffcb9ef78f02e66f49f209963e1 512 Gene3D G3DSA:1.20.1250.20 266 503 4.7E-11 T 01-11-2018 CDA09_11750 864345e4c29d6077b7a287bdb5db8988 257 ProSitePatterns PS00166 Enoyl-CoA hydratase/isomerase signature. 98 118 - T 01-11-2018 IPR018376 Enoyl-CoA hydratase/isomerase, conserved site GO:0003824 CDA09_11750 864345e4c29d6077b7a287bdb5db8988 257 Gene3D G3DSA:3.90.226.10 2 198 3.5E-74 T 01-11-2018 CDA09_11750 864345e4c29d6077b7a287bdb5db8988 257 Gene3D G3DSA:1.10.12.10 200 256 5.7E-23 T 01-11-2018 IPR014748 Enoyl-CoA hydratase, C-terminal CDA09_11750 864345e4c29d6077b7a287bdb5db8988 257 Pfam PF00378 Enoyl-CoA hydratase/isomerase 10 256 3.4E-76 T 01-11-2018 IPR001753 Enoyl-CoA hydratase/isomerase GO:0003824 CDA09_11750 864345e4c29d6077b7a287bdb5db8988 257 SUPERFAMILY SSF52096 2 256 1.32E-87 T 01-11-2018 IPR029045 ClpP/crotonase-like domain superfamily CDA09_22105 1205a2794ae868421ff4098a20b878e4 761 Pfam PF14457 Prokaryotic E2 family A 33 163 2.7E-23 T 01-11-2018 IPR032865 Prokaryotic E2 family A CDA09_22105 1205a2794ae868421ff4098a20b878e4 761 SUPERFAMILY SSF69572 331 464 3.14E-21 T 01-11-2018 IPR035985 Ubiquitin-activating enzyme GO:0008641 CDA09_22105 1205a2794ae868421ff4098a20b878e4 761 Gene3D G3DSA:3.40.140.10 611 756 1.5E-9 T 01-11-2018 CDA09_22105 1205a2794ae868421ff4098a20b878e4 761 Gene3D G3DSA:3.40.50.720 342 531 4.0E-25 T 01-11-2018 CDA09_22105 1205a2794ae868421ff4098a20b878e4 761 SUPERFAMILY SSF54495 66 129 3.04E-5 T 01-11-2018 IPR016135 Ubiquitin-conjugating enzyme/RWD-like CDA09_22105 1205a2794ae868421ff4098a20b878e4 761 SUPERFAMILY SSF102712 616 747 3.01E-9 T 01-11-2018 CDA09_22105 1205a2794ae868421ff4098a20b878e4 761 Pfam PF14464 Prokaryotic homologs of the JAB domain 614 730 7.0E-12 T 01-11-2018 IPR028090 JAB domain, prokaryotic CDA09_22105 1205a2794ae868421ff4098a20b878e4 761 Pfam PF00899 ThiF family 337 481 3.0E-21 T 01-11-2018 IPR000594 THIF-type NAD/FAD binding fold GO:0008641 CDA09_11430 8a5fee89b550f3a7850a2e7cf18ff504 496 Gene3D G3DSA:2.40.160.180 160 496 1.3E-11 T 01-11-2018 IPR038673 Carbohydrate-selective porin OprB superfamily CDA09_11430 8a5fee89b550f3a7850a2e7cf18ff504 496 SUPERFAMILY SSF56935 244 449 9.16E-5 T 01-11-2018 CDA09_12345 2b6b3ed61a59cd3a2b5a1ba715e42e44 506 Gene3D G3DSA:3.40.309.10 260 454 1.9E-130 T 01-11-2018 IPR016163 Aldehyde dehydrogenase, C-terminal GO:0016491|GO:0016620|GO:0055114 CDA09_12345 2b6b3ed61a59cd3a2b5a1ba715e42e44 506 SUPERFAMILY SSF53720 22 490 9.16E-126 T 01-11-2018 IPR016161 Aldehyde/histidinol dehydrogenase GO:0016491|GO:0055114 CDA09_12345 2b6b3ed61a59cd3a2b5a1ba715e42e44 506 Pfam PF00171 Aldehyde dehydrogenase family 25 482 5.0E-120 T 01-11-2018 IPR015590 Aldehyde dehydrogenase domain GO:0016491|GO:0055114 CDA09_12345 2b6b3ed61a59cd3a2b5a1ba715e42e44 506 ProSitePatterns PS00687 Aldehyde dehydrogenases glutamic acid active site. 256 263 - T 01-11-2018 IPR029510 Aldehyde dehydrogenase, glutamic acid active site GO:0016491|GO:0055114 CDA09_12345 2b6b3ed61a59cd3a2b5a1ba715e42e44 506 Gene3D G3DSA:3.40.605.10 26 479 1.9E-130 T 01-11-2018 IPR016162 Aldehyde dehydrogenase, N-terminal GO:0016491|GO:0055114 CDA09_19075 fae16f81f2a9d7ef7545eb855815a00a 1047 SUPERFAMILY SSF82866 802 1040 5.49E-49 T 01-11-2018 CDA09_19075 fae16f81f2a9d7ef7545eb855815a00a 1047 Gene3D G3DSA:3.30.70.1320 135 327 2.3E-262 T 01-11-2018 CDA09_19075 fae16f81f2a9d7ef7545eb855815a00a 1047 Gene3D G3DSA:3.30.70.1440 662 861 2.3E-262 T 01-11-2018 CDA09_19075 fae16f81f2a9d7ef7545eb855815a00a 1047 Gene3D G3DSA:3.30.2090.10 179 269 2.3E-262 T 01-11-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains CDA09_19075 fae16f81f2a9d7ef7545eb855815a00a 1047 TIGRFAM TIGR00914 2A0601: heavy metal efflux pump, CzcA family 1 1037 0.0 T 01-11-2018 IPR004763 Cation efflux system CzcA/CusA/SilA/NccA/HelA/CnrA GO:0006812|GO:0008324|GO:0016021 CDA09_19075 fae16f81f2a9d7ef7545eb855815a00a 1047 SUPERFAMILY SSF82714 716 800 2.35E-11 T 01-11-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains CDA09_19075 fae16f81f2a9d7ef7545eb855815a00a 1047 PRINTS PR00702 Acriflavin resistance protein family signature 386 410 2.7E-29 T 01-11-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 CDA09_19075 fae16f81f2a9d7ef7545eb855815a00a 1047 PRINTS PR00702 Acriflavin resistance protein family signature 470 493 2.7E-29 T 01-11-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 CDA09_19075 fae16f81f2a9d7ef7545eb855815a00a 1047 PRINTS PR00702 Acriflavin resistance protein family signature 544 561 2.7E-29 T 01-11-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 CDA09_19075 fae16f81f2a9d7ef7545eb855815a00a 1047 PRINTS PR00702 Acriflavin resistance protein family signature 358 379 2.7E-29 T 01-11-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 CDA09_19075 fae16f81f2a9d7ef7545eb855815a00a 1047 PRINTS PR00702 Acriflavin resistance protein family signature 40 58 2.7E-29 T 01-11-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 CDA09_19075 fae16f81f2a9d7ef7545eb855815a00a 1047 PRINTS PR00702 Acriflavin resistance protein family signature 12 36 2.7E-29 T 01-11-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 CDA09_19075 fae16f81f2a9d7ef7545eb855815a00a 1047 PRINTS PR00702 Acriflavin resistance protein family signature 331 354 2.7E-29 T 01-11-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 CDA09_19075 fae16f81f2a9d7ef7545eb855815a00a 1047 Gene3D G3DSA:1.20.1640.10 14 507 2.3E-262 T 01-11-2018 CDA09_19075 fae16f81f2a9d7ef7545eb855815a00a 1047 SUPERFAMILY SSF82693 137 325 2.67E-19 T 01-11-2018 CDA09_19075 fae16f81f2a9d7ef7545eb855815a00a 1047 SUPERFAMILY SSF82693 46 128 5.75E-20 T 01-11-2018 CDA09_19075 fae16f81f2a9d7ef7545eb855815a00a 1047 Gene3D G3DSA:3.30.70.1430 559 661 2.3E-262 T 01-11-2018 CDA09_19075 fae16f81f2a9d7ef7545eb855815a00a 1047 SUPERFAMILY SSF82866 291 498 4.19E-38 T 01-11-2018 CDA09_19075 fae16f81f2a9d7ef7545eb855815a00a 1047 Gene3D G3DSA:3.30.2090.10 713 803 2.3E-262 T 01-11-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains CDA09_19075 fae16f81f2a9d7ef7545eb855815a00a 1047 Gene3D G3DSA:1.20.1640.10 508 1031 2.3E-262 T 01-11-2018 CDA09_19075 fae16f81f2a9d7ef7545eb855815a00a 1047 Pfam PF00873 AcrB/AcrD/AcrF family 13 1035 8.5E-236 T 01-11-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 CDA09_19075 fae16f81f2a9d7ef7545eb855815a00a 1047 Gene3D G3DSA:3.30.70.1430 42 811 2.3E-262 T 01-11-2018 CDA09_19075 fae16f81f2a9d7ef7545eb855815a00a 1047 SUPERFAMILY SSF82714 183 264 4.32E-17 T 01-11-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains CDA09_19620 d3a6a59485613015c6c715095b5901e7 468 Pfam PF01565 FAD binding domain 50 187 6.6E-39 T 01-11-2018 IPR006094 FAD linked oxidase, N-terminal GO:0016491|GO:0050660|GO:0055114 CDA09_19620 d3a6a59485613015c6c715095b5901e7 468 SUPERFAMILY SSF56176 11 224 1.26E-68 T 01-11-2018 IPR036318 FAD-binding, type PCMH-like superfamily GO:0050660 CDA09_19620 d3a6a59485613015c6c715095b5901e7 468 Gene3D G3DSA:3.30.70.2740 343 424 1.2E-12 T 01-11-2018 CDA09_19620 d3a6a59485613015c6c715095b5901e7 468 SUPERFAMILY SSF55103 227 466 2.94E-75 T 01-11-2018 IPR016164 FAD-linked oxidase-like, C-terminal GO:0003824|GO:0050660 CDA09_19620 d3a6a59485613015c6c715095b5901e7 468 Pfam PF02913 FAD linked oxidases, C-terminal domain 224 464 1.1E-66 T 01-11-2018 IPR004113 FAD-linked oxidase, C-terminal GO:0003824|GO:0050660 CDA09_19620 d3a6a59485613015c6c715095b5901e7 468 Gene3D G3DSA:1.10.45.10 425 465 1.8E-13 T 01-11-2018 IPR016171 Vanillyl-alcohol oxidase, C-terminal subdomain 2 CDA09_19620 d3a6a59485613015c6c715095b5901e7 468 Gene3D G3DSA:3.30.465.40 22 242 2.0E-72 T 01-11-2018 CDA09_18925 379030f02d381eb696bd429d720cf587 140 Gene3D G3DSA:3.40.190.10 23 138 1.1E-8 T 01-11-2018 CDA09_18925 379030f02d381eb696bd429d720cf587 140 SUPERFAMILY SSF53850 20 135 5.43E-6 T 01-11-2018 CDA09_05165 d25db95cfccdf2e17188c367acd5b2ed 677 Gene3D G3DSA:3.40.50.920 552 677 2.1E-44 T 01-11-2018 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II GO:0003824 CDA09_05165 d25db95cfccdf2e17188c367acd5b2ed 677 ProSitePatterns PS00802 Transketolase signature 2. 480 496 - T 01-11-2018 IPR020826 Transketolase binding site KEGG: 00730+2.2.1.7|KEGG: 00900+2.2.1.7|MetaCyc: PWY-6891|MetaCyc: PWY-6892|MetaCyc: PWY-7560 CDA09_05165 d25db95cfccdf2e17188c367acd5b2ed 677 Gene3D G3DSA:3.40.50.970 340 550 6.6E-84 T 01-11-2018 CDA09_05165 d25db95cfccdf2e17188c367acd5b2ed 677 ProSitePatterns PS00801 Transketolase signature 1. 25 45 - T 01-11-2018 IPR005474 Transketolase, N-terminal KEGG: 00730+2.2.1.7|KEGG: 00900+2.2.1.7|MetaCyc: PWY-6891|MetaCyc: PWY-6892|MetaCyc: PWY-7560 CDA09_05165 d25db95cfccdf2e17188c367acd5b2ed 677 SUPERFAMILY SSF52518 17 333 1.42E-118 T 01-11-2018 IPR029061 Thiamin diphosphate-binding fold CDA09_05165 d25db95cfccdf2e17188c367acd5b2ed 677 Pfam PF02779 Transketolase, pyrimidine binding domain 367 537 1.2E-46 T 01-11-2018 IPR005475 Transketolase-like, pyrimidine-binding domain CDA09_05165 d25db95cfccdf2e17188c367acd5b2ed 677 TIGRFAM TIGR00232 tktlase_bact: transketolase 22 676 5.5E-298 T 01-11-2018 IPR005478 Transketolase, bacterial-like GO:0004802 KEGG: 00030+2.2.1.1|KEGG: 00710+2.2.1.1|MetaCyc: PWY-1861|MetaCyc: PWY-5723|MetaCyc: PWY-6901 CDA09_05165 d25db95cfccdf2e17188c367acd5b2ed 677 Pfam PF00456 Transketolase, thiamine diphosphate binding domain 22 347 1.3E-165 T 01-11-2018 IPR005474 Transketolase, N-terminal KEGG: 00730+2.2.1.7|KEGG: 00900+2.2.1.7|MetaCyc: PWY-6891|MetaCyc: PWY-6892|MetaCyc: PWY-7560 CDA09_05165 d25db95cfccdf2e17188c367acd5b2ed 677 Gene3D G3DSA:3.40.50.970 19 339 1.3E-130 T 01-11-2018 CDA09_05165 d25db95cfccdf2e17188c367acd5b2ed 677 Pfam PF02780 Transketolase, C-terminal domain 563 668 6.8E-15 T 01-11-2018 IPR033248 Transketolase, C-terminal domain CDA09_05165 d25db95cfccdf2e17188c367acd5b2ed 677 SUPERFAMILY SSF52922 546 677 9.42E-45 T 01-11-2018 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II GO:0003824 CDA09_05165 d25db95cfccdf2e17188c367acd5b2ed 677 SUPERFAMILY SSF52518 348 538 1.98E-69 T 01-11-2018 IPR029061 Thiamin diphosphate-binding fold CDA09_05165 d25db95cfccdf2e17188c367acd5b2ed 677 SMART SM00861 368 538 2.1E-69 T 01-11-2018 IPR005475 Transketolase-like, pyrimidine-binding domain CDA09_19255 49216bbb416c293a1732afecf919f1e5 297 Pfam PF05726 Pirin C-terminal cupin domain 189 293 2.2E-33 T 01-11-2018 IPR008778 Pirin, C-terminal domain Reactome: R-HSA-8935690 CDA09_19255 49216bbb416c293a1732afecf919f1e5 297 Pfam PF02678 Pirin 34 134 2.2E-35 T 01-11-2018 IPR003829 Pirin, N-terminal domain Reactome: R-HSA-8935690 CDA09_19255 49216bbb416c293a1732afecf919f1e5 297 SUPERFAMILY SSF51182 19 293 1.26E-86 T 01-11-2018 IPR011051 RmlC-like cupin domain superfamily CDA09_19255 49216bbb416c293a1732afecf919f1e5 297 Gene3D G3DSA:2.60.120.10 30 288 9.9E-97 T 01-11-2018 IPR014710 RmlC-like jelly roll fold CDA09_19255 49216bbb416c293a1732afecf919f1e5 297 PIRSF PIRSF006232 15 296 5.0E-100 T 01-11-2018 IPR012093 Pirin Reactome: R-HSA-8935690 CDA09_19255 49216bbb416c293a1732afecf919f1e5 297 Gene3D G3DSA:2.60.120.10 156 262 9.9E-97 T 01-11-2018 IPR014710 RmlC-like jelly roll fold CDA09_22940 3c8ae353b23cd19dbf75941436ba0be4 163 Gene3D G3DSA:3.30.70.790 71 145 2.0E-27 T 01-11-2018 IPR036675 UreE, C-terminal domain superfamily GO:0016151|GO:0019627|GO:0065003 CDA09_22940 3c8ae353b23cd19dbf75941436ba0be4 163 Pfam PF02814 UreE urease accessory protein, N-terminal domain 13 64 3.1E-13 T 01-11-2018 IPR004029 UreE urease accessory, N-terminal CDA09_22940 3c8ae353b23cd19dbf75941436ba0be4 163 Pfam PF05194 UreE urease accessory protein, C-terminal domain 71 148 9.8E-25 T 01-11-2018 IPR007864 Urease accessory protein UreE, C-terminal domain GO:0016151|GO:0019627|GO:0065003 CDA09_22940 3c8ae353b23cd19dbf75941436ba0be4 163 Gene3D G3DSA:2.60.260.20 1 69 5.6E-21 T 01-11-2018 CDA09_22940 3c8ae353b23cd19dbf75941436ba0be4 163 SUPERFAMILY SSF69287 1 70 1.18E-15 T 01-11-2018 IPR036118 UreE urease accessory, N-terminal domain superfamily CDA09_22940 3c8ae353b23cd19dbf75941436ba0be4 163 PIRSF PIRSF036402 3 158 2.5E-41 T 01-11-2018 IPR012406 Urease accessory protein UreE GO:0005737|GO:0006457|GO:0016151|GO:0018307 CDA09_22940 3c8ae353b23cd19dbf75941436ba0be4 163 SMART SM00988 3 64 9.6E-17 T 01-11-2018 IPR004029 UreE urease accessory, N-terminal CDA09_22940 3c8ae353b23cd19dbf75941436ba0be4 163 Hamap MF_00822 Urease accessory protein UreE [ureE]. 2 142 23.255 T 01-11-2018 IPR012406 Urease accessory protein UreE GO:0005737|GO:0006457|GO:0016151|GO:0018307 CDA09_22940 3c8ae353b23cd19dbf75941436ba0be4 163 SUPERFAMILY SSF69737 70 141 1.7E-19 T 01-11-2018 IPR036675 UreE, C-terminal domain superfamily GO:0016151|GO:0019627|GO:0065003 CDA09_16145 7a969c42b407a080485e7d17a74dbef6 234 Pfam PF10588 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region 82 119 8.7E-14 T 01-11-2018 IPR019574 NADH:ubiquinone oxidoreductase, subunit G, iron-sulphur binding GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 CDA09_16145 7a969c42b407a080485e7d17a74dbef6 234 Pfam PF13510 2Fe-2S iron-sulfur cluster binding domain 4 75 8.2E-18 T 01-11-2018 CDA09_16145 7a969c42b407a080485e7d17a74dbef6 234 Pfam PF13459 4Fe-4S single cluster domain 138 204 5.2E-11 T 01-11-2018 CDA09_16145 7a969c42b407a080485e7d17a74dbef6 234 Gene3D G3DSA:3.10.20.740 4 122 2.2E-34 T 01-11-2018 CDA09_16145 7a969c42b407a080485e7d17a74dbef6 234 ProSitePatterns PS00642 Respiratory-chain NADH dehydrogenase 75 Kd subunit signature 2. 97 109 - T 01-11-2018 IPR000283 NADH:ubiquinone oxidoreductase, 75kDa subunit, conserved site GO:0008137|GO:0016020|GO:0042773|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 CDA09_16145 7a969c42b407a080485e7d17a74dbef6 234 Gene3D G3DSA:3.30.70.20 127 207 9.8E-7 T 01-11-2018 CDA09_16145 7a969c42b407a080485e7d17a74dbef6 234 PIRSF PIRSF000309 3 233 6.1E-76 T 01-11-2018 IPR016214 NAD-reducing hydrogenase, HoxS gamma subunit MetaCyc: PWY-5382|MetaCyc: PWY-6758 CDA09_16145 7a969c42b407a080485e7d17a74dbef6 234 SMART SM00929 82 122 3.5E-15 T 01-11-2018 IPR019574 NADH:ubiquinone oxidoreductase, subunit G, iron-sulphur binding GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 CDA09_16145 7a969c42b407a080485e7d17a74dbef6 234 SUPERFAMILY SSF54292 4 122 1.11E-30 T 01-11-2018 IPR036010 2Fe-2S ferredoxin-like superfamily GO:0009055|GO:0051536 CDA09_21105 27ae2881c0c30e1092392b7905fc2e92 544 TIGRFAM TIGR00503 prfC: peptide chain release factor 3 14 539 2.7E-222 T 01-11-2018 IPR004548 Peptide chain release factor 3 GO:0003924|GO:0005737|GO:0006415 CDA09_21105 27ae2881c0c30e1092392b7905fc2e92 544 Pfam PF00009 Elongation factor Tu GTP binding domain 20 283 9.8E-52 T 01-11-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 CDA09_21105 27ae2881c0c30e1092392b7905fc2e92 544 Gene3D G3DSA:3.40.50.300 80 390 5.4E-107 T 01-11-2018 CDA09_21105 27ae2881c0c30e1092392b7905fc2e92 544 Gene3D G3DSA:3.30.70.3280 401 540 2.3E-45 T 01-11-2018 IPR038467 Peptide chain release factor 3, C-terminal domain superfamily CDA09_21105 27ae2881c0c30e1092392b7905fc2e92 544 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 21 161 4.7E-22 T 01-11-2018 IPR005225 Small GTP-binding protein domain GO:0005525 CDA09_21105 27ae2881c0c30e1092392b7905fc2e92 544 Pfam PF03144 Elongation factor Tu domain 2 325 391 1.2E-8 T 01-11-2018 IPR004161 Translation elongation factor EFTu-like, domain 2 GO:0005525 CDA09_21105 27ae2881c0c30e1092392b7905fc2e92 544 Gene3D G3DSA:3.40.50.300 118 281 5.4E-107 T 01-11-2018 CDA09_21105 27ae2881c0c30e1092392b7905fc2e92 544 Hamap MF_00072 Peptide chain release factor 3 [prfC]. 12 537 50.529 T 01-11-2018 IPR004548 Peptide chain release factor 3 GO:0003924|GO:0005737|GO:0006415 CDA09_21105 27ae2881c0c30e1092392b7905fc2e92 544 Pfam PF16658 Class II release factor RF3, C-terminal domain 398 524 3.2E-43 T 01-11-2018 IPR032090 Peptide chain release factor 3, C-terminal CDA09_21105 27ae2881c0c30e1092392b7905fc2e92 544 SUPERFAMILY SSF50447 267 401 3.53E-29 T 01-11-2018 IPR009000 Translation protein, beta-barrel domain superfamily CDA09_21105 27ae2881c0c30e1092392b7905fc2e92 544 SUPERFAMILY SSF52540 17 283 1.82E-87 T 01-11-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CDA09_21105 27ae2881c0c30e1092392b7905fc2e92 544 PRINTS PR00315 GTP-binding elongation factor signature 73 81 1.7E-12 T 01-11-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 CDA09_21105 27ae2881c0c30e1092392b7905fc2e92 544 PRINTS PR00315 GTP-binding elongation factor signature 109 120 1.7E-12 T 01-11-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 CDA09_21105 27ae2881c0c30e1092392b7905fc2e92 544 PRINTS PR00315 GTP-binding elongation factor signature 23 36 1.7E-12 T 01-11-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 CDA09_21105 27ae2881c0c30e1092392b7905fc2e92 544 PRINTS PR00315 GTP-binding elongation factor signature 93 103 1.7E-12 T 01-11-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 CDA09_21105 27ae2881c0c30e1092392b7905fc2e92 544 PRINTS PR00315 GTP-binding elongation factor signature 145 154 1.7E-12 T 01-11-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 CDA09_21105 27ae2881c0c30e1092392b7905fc2e92 544 ProSitePatterns PS00301 Translational (tr)-type guanine nucleotide-binding (G) domain signature. 66 81 - T 01-11-2018 IPR031157 Tr-type G domain, conserved site CDA09_21105 27ae2881c0c30e1092392b7905fc2e92 544 SUPERFAMILY SSF54980 403 476 1.12E-15 T 01-11-2018 IPR035647 EF-G domain III/V-like CDA09_01140 38b81ceb74750481d6a4baa70b4972c3 289 Pfam PF12697 Alpha/beta hydrolase family 29 281 7.4E-20 T 01-11-2018 IPR000073 Alpha/beta hydrolase fold-1 CDA09_01140 38b81ceb74750481d6a4baa70b4972c3 289 PRINTS PR00111 Alpha/beta hydrolase fold signature 111 124 2.8E-9 T 01-11-2018 IPR000073 Alpha/beta hydrolase fold-1 CDA09_01140 38b81ceb74750481d6a4baa70b4972c3 289 PRINTS PR00111 Alpha/beta hydrolase fold signature 52 67 2.8E-9 T 01-11-2018 IPR000073 Alpha/beta hydrolase fold-1 CDA09_01140 38b81ceb74750481d6a4baa70b4972c3 289 PRINTS PR00111 Alpha/beta hydrolase fold signature 97 110 2.8E-9 T 01-11-2018 IPR000073 Alpha/beta hydrolase fold-1 CDA09_01140 38b81ceb74750481d6a4baa70b4972c3 289 SUPERFAMILY SSF53474 8 288 6.93E-51 T 01-11-2018 IPR029058 Alpha/Beta hydrolase fold CDA09_01140 38b81ceb74750481d6a4baa70b4972c3 289 Gene3D G3DSA:3.40.50.1820 5 282 1.5E-60 T 01-11-2018 IPR029058 Alpha/Beta hydrolase fold CDA09_04935 baa2b4057ed822accdb8e481e271dc71 359 Hamap MF_00093 Peptide chain release factor 1 [prfA]. 5 357 41.121 T 01-11-2018 IPR004373 Peptide chain release factor 1 GO:0005737|GO:0006415|GO:0016149 CDA09_04935 baa2b4057ed822accdb8e481e271dc71 359 ProSitePatterns PS00745 Prokaryotic-type class I peptide chain release factors signature. 228 244 - T 01-11-2018 IPR000352 Peptide chain release factor class I/class II GO:0003747|GO:0006415 CDA09_04935 baa2b4057ed822accdb8e481e271dc71 359 Gene3D G3DSA:3.30.70.1660 112 342 9.2E-98 T 01-11-2018 CDA09_04935 baa2b4057ed822accdb8e481e271dc71 359 Pfam PF03462 PCRF domain 13 203 2.8E-69 T 01-11-2018 IPR005139 Peptide chain release factor GO:0006415 CDA09_04935 baa2b4057ed822accdb8e481e271dc71 359 Pfam PF00472 RF-1 domain 213 321 5.5E-42 T 01-11-2018 IPR000352 Peptide chain release factor class I/class II GO:0003747|GO:0006415 CDA09_04935 baa2b4057ed822accdb8e481e271dc71 359 SMART SM00937 63 178 9.5E-63 T 01-11-2018 IPR005139 Peptide chain release factor GO:0006415 CDA09_04935 baa2b4057ed822accdb8e481e271dc71 359 Gene3D G3DSA:3.30.160.20 210 297 9.2E-98 T 01-11-2018 CDA09_04935 baa2b4057ed822accdb8e481e271dc71 359 SUPERFAMILY SSF75620 12 353 6.28E-136 T 01-11-2018 CDA09_04935 baa2b4057ed822accdb8e481e271dc71 359 TIGRFAM TIGR00019 prfA: peptide chain release factor 1 1 357 9.3E-163 T 01-11-2018 IPR004373 Peptide chain release factor 1 GO:0005737|GO:0006415|GO:0016149 CDA09_07340 8d0c78aca974c02b4e287c0aea30ab8c 1055 Pfam PF14579 Helix-hairpin-helix motif 796 887 1.7E-20 T 01-11-2018 IPR029460 DNA polymerase, helix-hairpin-helix motif KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 CDA09_07340 8d0c78aca974c02b4e287c0aea30ab8c 1055 SUPERFAMILY SSF89550 12 191 1.51E-9 T 01-11-2018 IPR016195 Polymerase/histidinol phosphatase-like GO:0003824 Reactome: R-HSA-6784531|Reactome: R-HSA-6791226 CDA09_07340 8d0c78aca974c02b4e287c0aea30ab8c 1055 Pfam PF02811 PHP domain 14 106 1.4E-11 T 01-11-2018 IPR004013 PHP domain GO:0003824 CDA09_07340 8d0c78aca974c02b4e287c0aea30ab8c 1055 Hamap MF_01902 Error-prone DNA polymerase [dnaE2]. 12 1055 13.876 T 01-11-2018 IPR023073 DNA polymerase, error-prone GO:0003887 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 CDA09_07340 8d0c78aca974c02b4e287c0aea30ab8c 1055 TIGRFAM TIGR00594 polc: DNA polymerase III, alpha subunit 13 999 5.7E-144 T 01-11-2018 IPR004805 DNA polymerase III, alpha subunit GO:0006260|GO:0008408 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 CDA09_07340 8d0c78aca974c02b4e287c0aea30ab8c 1055 Pfam PF07733 Bacterial DNA polymerase III alpha subunit 284 722 6.5E-138 T 01-11-2018 IPR011708 Bacterial DNA polymerase III, alpha subunit GO:0006260|GO:0008408 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 CDA09_07340 8d0c78aca974c02b4e287c0aea30ab8c 1055 SMART SM00481 13 82 4.9E-13 T 01-11-2018 IPR003141 Polymerase/histidinol phosphatase, N-terminal CDA09_07340 8d0c78aca974c02b4e287c0aea30ab8c 1055 Gene3D G3DSA:3.20.20.140 2 261 1.2E-50 T 01-11-2018 CDA09_18560 d915fd81b42c82af8af5e9c45129a223 371 Gene3D G3DSA:2.40.50.100 1 102 4.0E-18 T 01-11-2018 CDA09_18560 d915fd81b42c82af8af5e9c45129a223 371 Pfam PF00364 Biotin-requiring enzyme 6 75 2.0E-10 T 01-11-2018 IPR000089 Biotin/lipoyl attachment CDA09_18560 d915fd81b42c82af8af5e9c45129a223 371 SUPERFAMILY SSF51230 3 94 6.94E-19 T 01-11-2018 IPR011053 Single hybrid motif CDA09_18560 d915fd81b42c82af8af5e9c45129a223 371 PRINTS PR00111 Alpha/beta hydrolase fold signature 318 332 1.6E-14 T 01-11-2018 IPR000073 Alpha/beta hydrolase fold-1 CDA09_18560 d915fd81b42c82af8af5e9c45129a223 371 PRINTS PR00111 Alpha/beta hydrolase fold signature 158 173 1.6E-14 T 01-11-2018 IPR000073 Alpha/beta hydrolase fold-1 CDA09_18560 d915fd81b42c82af8af5e9c45129a223 371 PRINTS PR00111 Alpha/beta hydrolase fold signature 216 229 1.6E-14 T 01-11-2018 IPR000073 Alpha/beta hydrolase fold-1 CDA09_18560 d915fd81b42c82af8af5e9c45129a223 371 PRINTS PR00111 Alpha/beta hydrolase fold signature 202 215 1.6E-14 T 01-11-2018 IPR000073 Alpha/beta hydrolase fold-1 CDA09_18560 d915fd81b42c82af8af5e9c45129a223 371 SUPERFAMILY SSF53474 110 369 2.7E-56 T 01-11-2018 IPR029058 Alpha/Beta hydrolase fold CDA09_18560 d915fd81b42c82af8af5e9c45129a223 371 Gene3D G3DSA:3.40.50.1820 103 371 7.5E-62 T 01-11-2018 IPR029058 Alpha/Beta hydrolase fold CDA09_18560 d915fd81b42c82af8af5e9c45129a223 371 Pfam PF12697 Alpha/beta hydrolase family 136 363 1.6E-22 T 01-11-2018 IPR000073 Alpha/beta hydrolase fold-1 CDA09_18560 d915fd81b42c82af8af5e9c45129a223 371 ProSitePatterns PS00189 2-oxo acid dehydrogenases acyltransferase component lipoyl binding site. 29 58 - T 01-11-2018 IPR003016 2-oxo acid dehydrogenase, lipoyl-binding site Reactome: R-HSA-389661 CDA09_15780 72f1c3a5c512fa85c4f5a0643f1470b9 501 Pfam PF03853 YjeF-related protein N-terminus 28 189 2.0E-46 T 01-11-2018 IPR004443 YjeF N-terminal domain MetaCyc: PWY-6938 CDA09_15780 72f1c3a5c512fa85c4f5a0643f1470b9 501 SUPERFAMILY SSF53613 224 491 1.66E-66 T 01-11-2018 IPR029056 Ribokinase-like CDA09_15780 72f1c3a5c512fa85c4f5a0643f1470b9 501 Gene3D G3DSA:3.40.1190.20 221 491 3.1E-75 T 01-11-2018 IPR029056 Ribokinase-like CDA09_15780 72f1c3a5c512fa85c4f5a0643f1470b9 501 ProSitePatterns PS01050 YjeF C-terminal domain signature 2. 429 439 - T 01-11-2018 IPR017953 Carbohydrate kinase, predicted, conserved site CDA09_15780 72f1c3a5c512fa85c4f5a0643f1470b9 501 Hamap MF_01965 ADP-dependent (S)-NAD(P)H-hydrate dehydratase [nnrD]. 223 491 21.858 T 01-11-2018 IPR000631 ATP-dependent (S)-NAD(P)H-hydrate dehydratase GO:0052855 Reactome: R-HSA-197264 CDA09_15780 72f1c3a5c512fa85c4f5a0643f1470b9 501 TIGRFAM TIGR00196 yjeF_cterm: YjeF family C-terminal domain 230 484 5.5E-58 T 01-11-2018 IPR000631 ATP-dependent (S)-NAD(P)H-hydrate dehydratase GO:0052855 Reactome: R-HSA-197264 CDA09_15780 72f1c3a5c512fa85c4f5a0643f1470b9 501 SUPERFAMILY SSF64153 8 244 7.19E-56 T 01-11-2018 IPR036652 YjeF N-terminal domain superfamily MetaCyc: PWY-6938 CDA09_15780 72f1c3a5c512fa85c4f5a0643f1470b9 501 PIRSF PIRSF017184 14 491 1.1E-109 T 01-11-2018 IPR030677 Bifunctional NAD(P)H-hydrate repair enzyme Nnr GO:0052855 MetaCyc: PWY-6938 CDA09_15780 72f1c3a5c512fa85c4f5a0643f1470b9 501 TIGRFAM TIGR00197 yjeF_nterm: YjeF family N-terminal domain 27 210 1.3E-42 T 01-11-2018 IPR004443 YjeF N-terminal domain MetaCyc: PWY-6938 CDA09_15780 72f1c3a5c512fa85c4f5a0643f1470b9 501 Hamap MF_01966 NAD(P)H-hydrate epimerase [nnrE]. 7 210 22.088 T 01-11-2018 IPR004443 YjeF N-terminal domain MetaCyc: PWY-6938 CDA09_15780 72f1c3a5c512fa85c4f5a0643f1470b9 501 Pfam PF01256 Carbohydrate kinase 246 471 1.7E-51 T 01-11-2018 IPR000631 ATP-dependent (S)-NAD(P)H-hydrate dehydratase GO:0052855 Reactome: R-HSA-197264 CDA09_15780 72f1c3a5c512fa85c4f5a0643f1470b9 501 Gene3D G3DSA:3.40.50.10260 14 214 6.9E-59 T 01-11-2018 IPR036652 YjeF N-terminal domain superfamily MetaCyc: PWY-6938 CDA09_06025 270e3fd41e9d083924a40569326f3a23 161 Gene3D G3DSA:3.30.70.860 3 160 9.1E-52 T 01-11-2018 IPR035571 UPF0234-like, C-terminal CDA09_06025 270e3fd41e9d083924a40569326f3a23 161 SUPERFAMILY SSF89963 88 161 2.28E-25 T 01-11-2018 IPR036183 YajQ-like superfamily CDA09_06025 270e3fd41e9d083924a40569326f3a23 161 SUPERFAMILY SSF89963 2 87 1.15E-26 T 01-11-2018 IPR036183 YajQ-like superfamily CDA09_06025 270e3fd41e9d083924a40569326f3a23 161 Hamap MF_00632 UPF0234 protein YajQ [yajQ]. 1 161 25.641 T 01-11-2018 IPR007551 Protein of unknown function DUF520 CDA09_06025 270e3fd41e9d083924a40569326f3a23 161 Pfam PF04461 Protein of unknown function (DUF520) 2 160 1.6E-60 T 01-11-2018 IPR007551 Protein of unknown function DUF520 CDA09_06025 270e3fd41e9d083924a40569326f3a23 161 Gene3D G3DSA:3.30.70.990 9 98 9.1E-52 T 01-11-2018 IPR035570 UPF0234, N-terminal CDA09_07445 c31ec8d1546fe3c4a634fa1565c1cdd3 409 SUPERFAMILY SSF89796 7 407 4.84E-109 T 01-11-2018 IPR023606 CoA-transferase family III domain superfamily CDA09_07445 c31ec8d1546fe3c4a634fa1565c1cdd3 409 Gene3D G3DSA:3.30.1540.10 242 335 1.4E-120 T 01-11-2018 CDA09_07445 c31ec8d1546fe3c4a634fa1565c1cdd3 409 Pfam PF02515 CoA-transferase family III 9 384 9.6E-114 T 01-11-2018 IPR003673 CoA-transferase family III GO:0003824 CDA09_07445 c31ec8d1546fe3c4a634fa1565c1cdd3 409 Gene3D G3DSA:3.40.50.10540 9 402 1.4E-120 T 01-11-2018 IPR023606 CoA-transferase family III domain superfamily CDA09_09600 86b2df2019a90cac2a34e7cfee5ecb91 403 SUPERFAMILY SSF53901 7 246 1.78E-17 T 01-11-2018 IPR016039 Thiolase-like GO:0003824 CDA09_09600 86b2df2019a90cac2a34e7cfee5ecb91 403 Gene3D G3DSA:3.40.47.10 1 402 5.2E-92 T 01-11-2018 IPR016039 Thiolase-like GO:0003824 CDA09_09600 86b2df2019a90cac2a34e7cfee5ecb91 403 PIRSF PIRSF000429 1 393 5.9E-23 T 01-11-2018 IPR002155 Thiolase GO:0016747 CDA09_09600 86b2df2019a90cac2a34e7cfee5ecb91 403 SUPERFAMILY SSF53901 267 392 1.04E-23 T 01-11-2018 IPR016039 Thiolase-like GO:0003824 CDA09_07170 76a934881faf44822351d65885b11517 276 SUPERFAMILY SSF56784 66 273 3.53E-51 T 01-11-2018 IPR036412 HAD-like superfamily CDA09_07170 76a934881faf44822351d65885b11517 276 TIGRFAM TIGR00338 serB: phosphoserine phosphatase SerB 70 274 8.2E-68 T 01-11-2018 CDA09_07170 76a934881faf44822351d65885b11517 276 Pfam PF12710 haloacid dehalogenase-like hydrolase 73 240 6.4E-28 T 01-11-2018 CDA09_07170 76a934881faf44822351d65885b11517 276 TIGRFAM TIGR01488 HAD-SF-IB: HAD phosphoserine phosphatase-like hydrolase, family IB 71 242 1.4E-34 T 01-11-2018 CDA09_07170 76a934881faf44822351d65885b11517 276 Gene3D G3DSA:3.40.50.1000 8 275 2.3E-76 T 01-11-2018 IPR023214 HAD superfamily CDA09_07170 76a934881faf44822351d65885b11517 276 Pfam PF13284 Domain of unknown function (DUF4072) 3 42 9.0E-13 T 01-11-2018 IPR025138 Domain of unknown function DUF4072 CDA09_00425 50464545743ec75b03bf67fc21bb8e54 113 SUPERFAMILY SSF82057 42 113 1.42E-25 T 01-11-2018 CDA09_00425 50464545743ec75b03bf67fc21bb8e54 113 SUPERFAMILY SSF57783 3 36 1.28E-11 T 01-11-2018 CDA09_00425 50464545743ec75b03bf67fc21bb8e54 113 Gene3D G3DSA:2.30.30.40 44 113 5.3E-30 T 01-11-2018 CDA09_00425 50464545743ec75b03bf67fc21bb8e54 113 Pfam PF08274 PhnA Zinc-Ribbon 5 32 2.1E-9 T 01-11-2018 IPR013987 PhnA protein, N-terminal CDA09_00425 50464545743ec75b03bf67fc21bb8e54 113 Gene3D G3DSA:2.20.25.10 1 42 1.8E-14 T 01-11-2018 CDA09_00425 50464545743ec75b03bf67fc21bb8e54 113 TIGRFAM TIGR00686 phnA: putative alkylphosphonate utilization operon protein PhnA 4 112 6.8E-44 T 01-11-2018 IPR004624 PhnA protein CDA09_00425 50464545743ec75b03bf67fc21bb8e54 113 Pfam PF03831 PhnA domain 47 113 2.7E-29 T 01-11-2018 IPR013988 PhnA protein, C-terminal CDA09_07155 829f7bdf18e2fff88abdcef1b2a798b7 444 ProSitePatterns PS00600 Aminotransferases class-III pyridoxal-phosphate attachment site. 256 293 - T 01-11-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 CDA09_07155 829f7bdf18e2fff88abdcef1b2a798b7 444 Pfam PF00202 Aminotransferase class-III 29 432 8.0E-111 T 01-11-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 CDA09_07155 829f7bdf18e2fff88abdcef1b2a798b7 444 TIGRFAM TIGR00508 bioA: adenosylmethionine-8-amino-7-oxononanoate transaminase 19 434 1.3E-156 T 01-11-2018 IPR005815 Adenosylmethionine--8-amino-7-oxononanoate aminotransferase BioA GO:0004015|GO:0009102 KEGG: 00780+2.6.1.62 CDA09_07155 829f7bdf18e2fff88abdcef1b2a798b7 444 SUPERFAMILY SSF53383 16 439 7.0E-122 T 01-11-2018 IPR015424 Pyridoxal phosphate-dependent transferase CDA09_07155 829f7bdf18e2fff88abdcef1b2a798b7 444 Gene3D G3DSA:3.40.640.10 69 345 1.9E-146 T 01-11-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 CDA09_07155 829f7bdf18e2fff88abdcef1b2a798b7 444 PIRSF PIRSF000521 24 441 8.4E-27 T 01-11-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 CDA09_07155 829f7bdf18e2fff88abdcef1b2a798b7 444 Gene3D G3DSA:3.90.1150.10 18 432 1.9E-146 T 01-11-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 CDA09_09945 0dc0ebd3a65092bad8aef7de4d772f90 325 Gene3D G3DSA:1.10.10.10 173 315 5.0E-12 T 01-11-2018 IPR036388 Winged helix-like DNA-binding domain superfamily CDA09_09945 0dc0ebd3a65092bad8aef7de4d772f90 325 Pfam PF01613 Flavin reductase like domain 17 158 4.6E-33 T 01-11-2018 IPR002563 Flavin reductase like domain GO:0010181 CDA09_09945 0dc0ebd3a65092bad8aef7de4d772f90 325 SUPERFAMILY SSF46785 173 313 2.07E-11 T 01-11-2018 IPR036390 Winged helix DNA-binding domain superfamily CDA09_09945 0dc0ebd3a65092bad8aef7de4d772f90 325 SMART SM00903 16 159 4.1E-54 T 01-11-2018 IPR002563 Flavin reductase like domain GO:0010181 CDA09_09945 0dc0ebd3a65092bad8aef7de4d772f90 325 SUPERFAMILY SSF50475 7 157 3.04E-44 T 01-11-2018 CDA09_09945 0dc0ebd3a65092bad8aef7de4d772f90 325 Gene3D G3DSA:2.30.110.10 5 171 9.6E-49 T 01-11-2018 IPR012349 FMN-binding split barrel GO:0048037 CDA09_01210 10f32a8fbabbc323d51464513ae16aec 734 Gene3D G3DSA:3.30.70.260 651 732 4.9E-14 T 01-11-2018 CDA09_01210 10f32a8fbabbc323d51464513ae16aec 734 Gene3D G3DSA:3.10.20.30 402 475 5.7E-30 T 01-11-2018 IPR012675 Beta-grasp domain superfamily CDA09_01210 10f32a8fbabbc323d51464513ae16aec 734 Gene3D G3DSA:1.10.3210.10 21 211 1.2E-77 T 01-11-2018 CDA09_01210 10f32a8fbabbc323d51464513ae16aec 734 Pfam PF13328 HD domain 47 196 6.7E-51 T 01-11-2018 IPR003607 HD/PDEase domain CDA09_01210 10f32a8fbabbc323d51464513ae16aec 734 Gene3D G3DSA:3.30.460.10 214 346 6.6E-45 T 01-11-2018 CDA09_01210 10f32a8fbabbc323d51464513ae16aec 734 Pfam PF02824 TGS domain 409 468 3.0E-18 T 01-11-2018 IPR004095 TGS KEGG: 00970+6.1.1.3 CDA09_01210 10f32a8fbabbc323d51464513ae16aec 734 SUPERFAMILY SSF109604 26 210 1.63E-70 T 01-11-2018 CDA09_01210 10f32a8fbabbc323d51464513ae16aec 734 Pfam PF13291 ACT domain 650 727 8.2E-20 T 01-11-2018 IPR002912 ACT domain CDA09_01210 10f32a8fbabbc323d51464513ae16aec 734 SUPERFAMILY SSF81271 396 468 2.4E-21 T 01-11-2018 IPR012676 TGS-like KEGG: 00970+6.1.1.3 CDA09_01210 10f32a8fbabbc323d51464513ae16aec 734 SUPERFAMILY SSF81301 202 413 3.6E-62 T 01-11-2018 CDA09_01210 10f32a8fbabbc323d51464513ae16aec 734 Pfam PF04607 Region found in RelA / SpoT proteins 256 366 7.1E-34 T 01-11-2018 IPR007685 RelA/SpoT GO:0015969 CDA09_01210 10f32a8fbabbc323d51464513ae16aec 734 SMART SM00471 62 174 9.5E-9 T 01-11-2018 IPR003607 HD/PDEase domain CDA09_01210 10f32a8fbabbc323d51464513ae16aec 734 SMART SM00954 256 366 3.5E-63 T 01-11-2018 IPR007685 RelA/SpoT GO:0015969 CDA09_01210 10f32a8fbabbc323d51464513ae16aec 734 TIGRFAM TIGR00691 spoT_relA: RelA/SpoT family protein 47 726 2.5E-228 T 01-11-2018 IPR004811 RelA/SpoT family GO:0015969 CDA09_01210 10f32a8fbabbc323d51464513ae16aec 734 SUPERFAMILY SSF55021 650 726 4.16E-9 T 01-11-2018 CDA09_12790 aa6dd24f6dd48d47210762b679fc99de 259 SMART SM00382 31 228 7.6E-16 T 01-11-2018 IPR003593 AAA+ ATPase domain CDA09_12790 aa6dd24f6dd48d47210762b679fc99de 259 SUPERFAMILY SSF52540 5 232 5.33E-60 T 01-11-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CDA09_12790 aa6dd24f6dd48d47210762b679fc99de 259 Pfam PF00005 ABC transporter 24 172 9.1E-31 T 01-11-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 CDA09_12790 aa6dd24f6dd48d47210762b679fc99de 259 Gene3D G3DSA:3.40.50.300 5 255 3.8E-63 T 01-11-2018 CDA09_17295 4c59cca5306fd4309c7b0f9e7ca8251e 258 PIRSF PIRSF029755 1 257 3.8E-119 T 01-11-2018 IPR016938 Uncharacterised protein family UPF0317 CDA09_17295 4c59cca5306fd4309c7b0f9e7ca8251e 258 Pfam PF07286 Protein of unknown function (DUF1445) 107 249 7.9E-68 T 01-11-2018 IPR009906 D-glutamate cyclase CDA09_17295 4c59cca5306fd4309c7b0f9e7ca8251e 258 Gene3D G3DSA:3.40.1640.10 12 245 1.8E-93 T 01-11-2018 CDA09_17295 4c59cca5306fd4309c7b0f9e7ca8251e 258 Gene3D G3DSA:3.30.2040.10 117 229 1.8E-93 T 01-11-2018 CDA09_17295 4c59cca5306fd4309c7b0f9e7ca8251e 258 SUPERFAMILY SSF160920 4 250 8.5E-111 T 01-11-2018 IPR038021 Putative hydro-lyase CDA09_17295 4c59cca5306fd4309c7b0f9e7ca8251e 258 Hamap MF_01830 Putative hydro-lyase . 3 257 53.606 T 01-11-2018 IPR016938 Uncharacterised protein family UPF0317 CDA09_20700 e0bda00575ed6f2f770e65366107cb7b 227 Gene3D G3DSA:3.40.50.620 5 222 6.3E-75 T 01-11-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold CDA09_20700 e0bda00575ed6f2f770e65366107cb7b 227 TIGRFAM TIGR00364 TIGR00364: queuosine biosynthesis protein QueC 8 211 5.0E-62 T 01-11-2018 IPR018317 Queuosine biosynthesis protein QueC KEGG: 00790+6.3.4.20|MetaCyc: PWY-6703 CDA09_20700 e0bda00575ed6f2f770e65366107cb7b 227 PIRSF PIRSF006293 5 227 1.9E-77 T 01-11-2018 IPR018317 Queuosine biosynthesis protein QueC KEGG: 00790+6.3.4.20|MetaCyc: PWY-6703 CDA09_20700 e0bda00575ed6f2f770e65366107cb7b 227 Pfam PF06508 Queuosine biosynthesis protein QueC 7 217 4.1E-77 T 01-11-2018 IPR018317 Queuosine biosynthesis protein QueC KEGG: 00790+6.3.4.20|MetaCyc: PWY-6703 CDA09_20700 e0bda00575ed6f2f770e65366107cb7b 227 Hamap MF_01633 7-cyano-7-deazaguanine synthase [queC]. 6 224 55.4 T 01-11-2018 IPR018317 Queuosine biosynthesis protein QueC KEGG: 00790+6.3.4.20|MetaCyc: PWY-6703 CDA09_20700 e0bda00575ed6f2f770e65366107cb7b 227 SUPERFAMILY SSF52402 6 226 7.94E-65 T 01-11-2018 CDA09_17015 051c89a567f35bda44a06188927b94cf 372 Gene3D G3DSA:1.20.140.10 217 371 2.1E-25 T 01-11-2018 CDA09_17015 051c89a567f35bda44a06188927b94cf 372 Pfam PF00441 Acyl-CoA dehydrogenase, C-terminal domain 221 351 1.8E-18 T 01-11-2018 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal GO:0016627|GO:0055114 CDA09_17015 051c89a567f35bda44a06188927b94cf 372 SUPERFAMILY SSF56645 9 200 1.44E-28 T 01-11-2018 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain superfamily GO:0016627|GO:0055114 CDA09_17015 051c89a567f35bda44a06188927b94cf 372 Gene3D G3DSA:1.10.540.10 5 118 3.5E-19 T 01-11-2018 IPR037069 Acyl-CoA dehydrogenase/oxidase, N-terminal domain superfamily GO:0016627|GO:0050660|GO:0055114 CDA09_17015 051c89a567f35bda44a06188927b94cf 372 SUPERFAMILY SSF47203 219 357 1.39E-29 T 01-11-2018 IPR036250 Acyl-CoA dehydrogenase-like, C-terminal GO:0016627|GO:0055114 CDA09_17015 051c89a567f35bda44a06188927b94cf 372 Gene3D G3DSA:2.40.110.10 124 216 5.5E-7 T 01-11-2018 CDA09_17015 051c89a567f35bda44a06188927b94cf 372 Pfam PF02771 Acyl-CoA dehydrogenase, N-terminal domain 10 116 1.1E-9 T 01-11-2018 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal GO:0016627|GO:0050660|GO:0055114 CDA09_04555 d5ee1f881c065099416d31c46fd96dba 822 PRINTS PR00397 Sirohaem Fe-binding site signature 689 707 2.4E-6 T 01-11-2018 IPR006066 Nitrite/sulphite reductase iron-sulphur/sirohaem-binding site GO:0016491|GO:0020037|GO:0051536|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683 CDA09_04555 d5ee1f881c065099416d31c46fd96dba 822 PRINTS PR00397 Sirohaem Fe-binding site signature 646 664 2.4E-6 T 01-11-2018 IPR006066 Nitrite/sulphite reductase iron-sulphur/sirohaem-binding site GO:0016491|GO:0020037|GO:0051536|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683 CDA09_04555 d5ee1f881c065099416d31c46fd96dba 822 SUPERFAMILY SSF51905 143 319 3.89E-25 T 01-11-2018 IPR036188 FAD/NAD(P)-binding domain superfamily CDA09_04555 d5ee1f881c065099416d31c46fd96dba 822 Gene3D G3DSA:3.50.50.60 115 245 6.0E-83 T 01-11-2018 IPR036188 FAD/NAD(P)-binding domain superfamily CDA09_04555 d5ee1f881c065099416d31c46fd96dba 822 SUPERFAMILY SSF55124 531 638 1.96E-24 T 01-11-2018 IPR036136 Nitrite/Sulfite reductase ferredoxin-like domain superfamily GO:0016491|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683 CDA09_04555 d5ee1f881c065099416d31c46fd96dba 822 TIGRFAM TIGR02374 nitri_red_nirB: nitrite reductase [NAD(P)H], large subunit 6 804 2.7E-276 T 01-11-2018 IPR012744 Nitrite reductase [NAD(P)H] large subunit, NirB GO:0008942|GO:0042128|GO:0050660|GO:0050661|GO:0055114 CDA09_04555 d5ee1f881c065099416d31c46fd96dba 822 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 5 290 2.4E-49 T 01-11-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 CDA09_04555 d5ee1f881c065099416d31c46fd96dba 822 Gene3D G3DSA:3.30.390.30 327 406 8.2E-8 T 01-11-2018 IPR016156 FAD/NAD-linked reductase, dimerisation domain superfamily GO:0016491|GO:0050660|GO:0055114 CDA09_04555 d5ee1f881c065099416d31c46fd96dba 822 Pfam PF04324 BFD-like [2Fe-2S] binding domain 432 480 4.9E-14 T 01-11-2018 IPR007419 BFD-like [2Fe-2S]-binding domain CDA09_04555 d5ee1f881c065099416d31c46fd96dba 822 Pfam PF04324 BFD-like [2Fe-2S] binding domain 496 547 5.3E-14 T 01-11-2018 IPR007419 BFD-like [2Fe-2S]-binding domain CDA09_04555 d5ee1f881c065099416d31c46fd96dba 822 Pfam PF01077 Nitrite and sulphite reductase 4Fe-4S domain 642 781 6.9E-24 T 01-11-2018 IPR006067 Nitrite/sulphite reductase 4Fe-4S domain GO:0016491|GO:0020037|GO:0051536|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683 CDA09_04555 d5ee1f881c065099416d31c46fd96dba 822 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 239 253 1.5E-9 T 01-11-2018 CDA09_04555 d5ee1f881c065099416d31c46fd96dba 822 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 5 27 1.5E-9 T 01-11-2018 CDA09_04555 d5ee1f881c065099416d31c46fd96dba 822 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 147 172 1.5E-9 T 01-11-2018 CDA09_04555 d5ee1f881c065099416d31c46fd96dba 822 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 283 290 1.5E-9 T 01-11-2018 CDA09_04555 d5ee1f881c065099416d31c46fd96dba 822 Gene3D G3DSA:3.90.480.10 563 648 1.7E-5 T 01-11-2018 CDA09_04555 d5ee1f881c065099416d31c46fd96dba 822 SUPERFAMILY SSF51905 2 193 9.43E-45 T 01-11-2018 IPR036188 FAD/NAD(P)-binding domain superfamily CDA09_04555 d5ee1f881c065099416d31c46fd96dba 822 ProSitePatterns PS00365 Nitrite and sulfite reductases iron-sulfur/siroheme-binding site. 689 705 - T 01-11-2018 IPR006066 Nitrite/sulphite reductase iron-sulphur/sirohaem-binding site GO:0016491|GO:0020037|GO:0051536|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683 CDA09_04555 d5ee1f881c065099416d31c46fd96dba 822 Gene3D G3DSA:3.50.50.60 7 314 6.0E-83 T 01-11-2018 IPR036188 FAD/NAD(P)-binding domain superfamily CDA09_04555 d5ee1f881c065099416d31c46fd96dba 822 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 147 165 2.9E-15 T 01-11-2018 CDA09_04555 d5ee1f881c065099416d31c46fd96dba 822 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 268 290 2.9E-15 T 01-11-2018 CDA09_04555 d5ee1f881c065099416d31c46fd96dba 822 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 102 120 2.9E-15 T 01-11-2018 CDA09_04555 d5ee1f881c065099416d31c46fd96dba 822 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 238 254 2.9E-15 T 01-11-2018 CDA09_04555 d5ee1f881c065099416d31c46fd96dba 822 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 6 25 2.9E-15 T 01-11-2018 CDA09_04555 d5ee1f881c065099416d31c46fd96dba 822 SUPERFAMILY SSF56014 643 807 9.42E-49 T 01-11-2018 CDA09_04555 d5ee1f881c065099416d31c46fd96dba 822 Gene3D G3DSA:3.30.413.10 649 777 7.1E-29 T 01-11-2018 CDA09_04555 d5ee1f881c065099416d31c46fd96dba 822 Pfam PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain 572 633 2.8E-12 T 01-11-2018 IPR005117 Nitrite/Sulfite reductase ferredoxin-like domain GO:0016491|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683 CDA09_04555 d5ee1f881c065099416d31c46fd96dba 822 Gene3D G3DSA:1.10.10.1100 431 484 1.6E-9 T 01-11-2018 CDA09_04555 d5ee1f881c065099416d31c46fd96dba 822 PIRSF PIRSF037149 1 821 0.0 T 01-11-2018 IPR017121 Nitrite reductase [NAD(P)H], large subunit GO:0042128 CDA09_01175 048e42565db4133f2992cd48d1dbe79c 343 SUPERFAMILY SSF46565 1 56 2.75E-17 T 01-11-2018 IPR036869 Chaperone J-domain superfamily CDA09_01175 048e42565db4133f2992cd48d1dbe79c 343 SUPERFAMILY SSF49493 85 233 1.31E-13 T 01-11-2018 IPR008971 HSP40/DnaJ peptide-binding GO:0006457|GO:0051082 CDA09_01175 048e42565db4133f2992cd48d1dbe79c 343 Gene3D G3DSA:2.10.230.10 118 174 1.1E-24 T 01-11-2018 CDA09_01175 048e42565db4133f2992cd48d1dbe79c 343 SUPERFAMILY SSF57938 105 176 1.06E-11 T 01-11-2018 IPR036410 Heat shock protein DnaJ, cysteine-rich domain superfamily CDA09_01175 048e42565db4133f2992cd48d1dbe79c 343 SMART SM00271 1 58 4.4E-20 T 01-11-2018 IPR001623 DnaJ domain CDA09_01175 048e42565db4133f2992cd48d1dbe79c 343 Pfam PF01556 DnaJ C terminal domain 92 299 1.3E-20 T 01-11-2018 IPR002939 Chaperone DnaJ, C-terminal CDA09_01175 048e42565db4133f2992cd48d1dbe79c 343 SUPERFAMILY SSF49493 225 305 2.75E-10 T 01-11-2018 IPR008971 HSP40/DnaJ peptide-binding GO:0006457|GO:0051082 CDA09_01175 048e42565db4133f2992cd48d1dbe79c 343 PRINTS PR00625 DnaJ domain signature 22 37 1.4E-11 T 01-11-2018 IPR001623 DnaJ domain CDA09_01175 048e42565db4133f2992cd48d1dbe79c 343 PRINTS PR00625 DnaJ domain signature 4 22 1.4E-11 T 01-11-2018 IPR001623 DnaJ domain CDA09_01175 048e42565db4133f2992cd48d1dbe79c 343 PRINTS PR00625 DnaJ domain signature 38 58 1.4E-11 T 01-11-2018 IPR001623 DnaJ domain CDA09_01175 048e42565db4133f2992cd48d1dbe79c 343 Gene3D G3DSA:2.60.260.20 220 326 1.4E-15 T 01-11-2018 CDA09_01175 048e42565db4133f2992cd48d1dbe79c 343 Gene3D G3DSA:1.10.287.110 1 59 6.7E-18 T 01-11-2018 IPR036869 Chaperone J-domain superfamily CDA09_01175 048e42565db4133f2992cd48d1dbe79c 343 Pfam PF00226 DnaJ domain 2 55 3.3E-15 T 01-11-2018 IPR001623 DnaJ domain CDA09_01175 048e42565db4133f2992cd48d1dbe79c 343 Gene3D G3DSA:2.60.260.20 88 215 1.1E-24 T 01-11-2018 CDA09_12625 3700e13c1eb92c0150a9038923fdd602 385 Pfam PF07687 Peptidase dimerisation domain 187 280 4.9E-7 T 01-11-2018 IPR011650 Peptidase M20, dimerisation domain CDA09_12625 3700e13c1eb92c0150a9038923fdd602 385 TIGRFAM TIGR01891 amidohydrolases: amidohydrolase 15 372 6.7E-102 T 01-11-2018 IPR017439 Amidohydrolase GO:0016787 CDA09_12625 3700e13c1eb92c0150a9038923fdd602 385 Gene3D G3DSA:3.30.70.360 182 296 6.2E-125 T 01-11-2018 CDA09_12625 3700e13c1eb92c0150a9038923fdd602 385 SUPERFAMILY SSF55031 185 290 4.78E-26 T 01-11-2018 IPR036264 Bacterial exopeptidase dimerisation domain CDA09_12625 3700e13c1eb92c0150a9038923fdd602 385 PIRSF PIRSF005962 1 385 6.4E-120 T 01-11-2018 IPR017439 Amidohydrolase GO:0016787 CDA09_12625 3700e13c1eb92c0150a9038923fdd602 385 Pfam PF01546 Peptidase family M20/M25/M40 74 381 6.7E-34 T 01-11-2018 IPR002933 Peptidase M20 GO:0016787 CDA09_12625 3700e13c1eb92c0150a9038923fdd602 385 SUPERFAMILY SSF53187 2 384 1.69E-85 T 01-11-2018 CDA09_12625 3700e13c1eb92c0150a9038923fdd602 385 Gene3D G3DSA:3.40.630.10 17 369 6.2E-125 T 01-11-2018 CDA09_22485 9d48e1b56a8c229b732627e7d0da08fc 223 Gene3D G3DSA:3.10.620.30 1 147 4.3E-16 T 01-11-2018 CDA09_22485 9d48e1b56a8c229b732627e7d0da08fc 223 SUPERFAMILY SSF54001 17 173 5.67E-23 T 01-11-2018 IPR038765 Papain-like cysteine peptidase superfamily CDA09_22485 9d48e1b56a8c229b732627e7d0da08fc 223 Pfam PF01841 Transglutaminase-like superfamily 30 135 3.3E-15 T 01-11-2018 IPR002931 Transglutaminase-like CDA09_06810 013f3a15ae5fae0450a4cb1ffddbaa74 151 TIGRFAM TIGR02473 flagell_FliJ: flagellar export protein FliJ 5 142 1.2E-24 T 01-11-2018 IPR012823 Flagellar export FliJ GO:0009288|GO:0071973 CDA09_06810 013f3a15ae5fae0450a4cb1ffddbaa74 151 Pfam PF02050 Flagellar FliJ protein 19 142 7.2E-29 T 01-11-2018 IPR012823 Flagellar export FliJ GO:0009288|GO:0071973 CDA09_06810 013f3a15ae5fae0450a4cb1ffddbaa74 151 PIRSF PIRSF019404 1 148 4.4E-45 T 01-11-2018 IPR018006 Flagellar FliJ, proteobacteria GO:0003774|GO:0006935|GO:0009288|GO:0016020|GO:0071973 CDA09_06810 013f3a15ae5fae0450a4cb1ffddbaa74 151 PRINTS PR01004 Flagellar FliJ protein signature 108 126 7.8E-9 T 01-11-2018 IPR018006 Flagellar FliJ, proteobacteria GO:0003774|GO:0006935|GO:0009288|GO:0016020|GO:0071973 CDA09_06810 013f3a15ae5fae0450a4cb1ffddbaa74 151 PRINTS PR01004 Flagellar FliJ protein signature 126 146 7.8E-9 T 01-11-2018 IPR018006 Flagellar FliJ, proteobacteria GO:0003774|GO:0006935|GO:0009288|GO:0016020|GO:0071973 CDA09_06810 013f3a15ae5fae0450a4cb1ffddbaa74 151 PRINTS PR01004 Flagellar FliJ protein signature 4 26 7.8E-9 T 01-11-2018 IPR018006 Flagellar FliJ, proteobacteria GO:0003774|GO:0006935|GO:0009288|GO:0016020|GO:0071973 CDA09_06810 013f3a15ae5fae0450a4cb1ffddbaa74 151 PRINTS PR01004 Flagellar FliJ protein signature 44 61 7.8E-9 T 01-11-2018 IPR018006 Flagellar FliJ, proteobacteria GO:0003774|GO:0006935|GO:0009288|GO:0016020|GO:0071973 CDA09_06810 013f3a15ae5fae0450a4cb1ffddbaa74 151 PRINTS PR01004 Flagellar FliJ protein signature 63 84 7.8E-9 T 01-11-2018 IPR018006 Flagellar FliJ, proteobacteria GO:0003774|GO:0006935|GO:0009288|GO:0016020|GO:0071973 CDA09_06150 70810f77d24c9831507db029685b1449 569 Gene3D G3DSA:3.40.50.970 1 185 6.9E-73 T 01-11-2018 CDA09_06150 70810f77d24c9831507db029685b1449 569 SUPERFAMILY SSF52518 370 564 5.71E-67 T 01-11-2018 IPR029061 Thiamin diphosphate-binding fold CDA09_06150 70810f77d24c9831507db029685b1449 569 Pfam PF00205 Thiamine pyrophosphate enzyme, central domain 193 328 5.0E-43 T 01-11-2018 IPR012000 Thiamine pyrophosphate enzyme, central domain GO:0000287|GO:0030976 CDA09_06150 70810f77d24c9831507db029685b1449 569 SUPERFAMILY SSF52518 2 181 8.84E-64 T 01-11-2018 IPR029061 Thiamin diphosphate-binding fold CDA09_06150 70810f77d24c9831507db029685b1449 569 TIGRFAM TIGR00118 acolac_lg: acetolactate synthase, large subunit, biosynthetic type 3 564 1.6E-254 T 01-11-2018 IPR012846 Acetolactate synthase, large subunit, biosynthetic GO:0000287|GO:0003984|GO:0009082|GO:0030976|GO:0050660 KEGG: 00290+2.2.1.6|KEGG: 00650+2.2.1.6|KEGG: 00660+2.2.1.6|KEGG: 00770+2.2.1.6|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-5938|MetaCyc: PWY-5939|MetaCyc: PWY-6389|MetaCyc: PWY-7111 CDA09_06150 70810f77d24c9831507db029685b1449 569 SUPERFAMILY SSF52467 186 360 4.04E-63 T 01-11-2018 IPR029035 DHS-like NAD/FAD-binding domain superfamily CDA09_06150 70810f77d24c9831507db029685b1449 569 Gene3D G3DSA:3.40.50.1220 187 358 1.8E-59 T 01-11-2018 CDA09_06150 70810f77d24c9831507db029685b1449 569 Pfam PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain 4 169 9.6E-59 T 01-11-2018 IPR012001 Thiamine pyrophosphate enzyme, N-terminal TPP-binding domain GO:0030976 CDA09_06150 70810f77d24c9831507db029685b1449 569 Gene3D G3DSA:3.40.50.970 360 567 1.2E-66 T 01-11-2018 CDA09_06150 70810f77d24c9831507db029685b1449 569 Pfam PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain 392 540 2.3E-47 T 01-11-2018 IPR011766 Thiamine pyrophosphate enzyme, C-terminal TPP-binding GO:0003824|GO:0030976 CDA09_11735 d2113e229f632b83e66cc7e67986238b 305 Gene3D G3DSA:1.10.1040.10 171 297 3.4E-42 T 01-11-2018 IPR013328 6-phosphogluconate dehydrogenase, domain 2 GO:0016491|GO:0055114 CDA09_11735 d2113e229f632b83e66cc7e67986238b 305 TIGRFAM TIGR00745 apbA_panE: 2-dehydropantoate 2-reductase 2 294 1.4E-83 T 01-11-2018 IPR003710 Ketopantoate reductase ApbA/PanE GO:0005737|GO:0008677|GO:0015940 KEGG: 00770+1.1.1.169|MetaCyc: PWY-6654 CDA09_11735 d2113e229f632b83e66cc7e67986238b 305 Pfam PF02558 Ketopantoate reductase PanE/ApbA 3 149 1.4E-38 T 01-11-2018 IPR013332 Ketopantoate reductase, N-terminal domain CDA09_11735 d2113e229f632b83e66cc7e67986238b 305 SUPERFAMILY SSF48179 170 293 7.82E-33 T 01-11-2018 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily GO:0055114 CDA09_11735 d2113e229f632b83e66cc7e67986238b 305 SUPERFAMILY SSF51735 1 172 5.75E-20 T 01-11-2018 IPR036291 NAD(P)-binding domain superfamily CDA09_11735 d2113e229f632b83e66cc7e67986238b 305 Pfam PF08546 Ketopantoate reductase PanE/ApbA C terminal 171 293 1.8E-32 T 01-11-2018 IPR013752 Ketopantoate reductase, C-terminal domain CDA09_11735 d2113e229f632b83e66cc7e67986238b 305 Gene3D G3DSA:3.40.50.720 2 170 4.4E-62 T 01-11-2018 CDA09_05825 a024e35bf422bc23db846cb34a45e046 296 Gene3D G3DSA:3.10.50.40 148 247 1.4E-9 T 01-11-2018 CDA09_05825 a024e35bf422bc23db846cb34a45e046 296 SUPERFAMILY SSF109998 58 173 1.18E-6 T 01-11-2018 IPR027304 Trigger factor/SurA domain superfamily CDA09_05825 a024e35bf422bc23db846cb34a45e046 296 Pfam PF13145 PPIC-type PPIASE domain 128 259 4.1E-16 T 01-11-2018 IPR000297 Peptidyl-prolyl cis-trans isomerase, PpiC-type GO:0003755 CDA09_05825 a024e35bf422bc23db846cb34a45e046 296 Gene3D G3DSA:1.10.4030.30 48 261 1.4E-9 T 01-11-2018 CDA09_04025 189eed47af43c96f8dca3f06a9d6843b 316 Pfam PF13793 N-terminal domain of ribose phosphate pyrophosphokinase 6 123 2.1E-46 T 01-11-2018 IPR029099 Ribose-phosphate pyrophosphokinase, N-terminal domain KEGG: 00030+2.7.6.1|KEGG: 00230+2.7.6.1 CDA09_04025 189eed47af43c96f8dca3f06a9d6843b 316 SUPERFAMILY SSF53271 71 307 5.47E-61 T 01-11-2018 IPR029057 Phosphoribosyltransferase-like CDA09_04025 189eed47af43c96f8dca3f06a9d6843b 316 ProSitePatterns PS00114 Phosphoribosyl pyrophosphate synthase signature. 131 146 - T 01-11-2018 IPR000842 Phosphoribosyl pyrophosphate synthetase, conserved site GO:0000287|GO:0004749|GO:0009156|GO:0044249 KEGG: 00030+2.7.6.1|KEGG: 00230+2.7.6.1|Reactome: R-HSA-73843 CDA09_04025 189eed47af43c96f8dca3f06a9d6843b 316 Pfam PF14572 Phosphoribosyl synthetase-associated domain 205 314 2.5E-25 T 01-11-2018 IPR005946 Ribose-phosphate pyrophosphokinase GO:0000287|GO:0004749|GO:0009165 KEGG: 00030+2.7.6.1|KEGG: 00230+2.7.6.1 CDA09_04025 189eed47af43c96f8dca3f06a9d6843b 316 SMART SM01400 6 123 4.7E-73 T 01-11-2018 CDA09_04025 189eed47af43c96f8dca3f06a9d6843b 316 Gene3D G3DSA:3.40.50.2020 150 291 1.8E-127 T 01-11-2018 CDA09_04025 189eed47af43c96f8dca3f06a9d6843b 316 Gene3D G3DSA:3.40.50.2020 9 302 1.8E-127 T 01-11-2018 CDA09_04025 189eed47af43c96f8dca3f06a9d6843b 316 TIGRFAM TIGR01251 ribP_PPkin: ribose-phosphate diphosphokinase 7 314 2.4E-119 T 01-11-2018 IPR005946 Ribose-phosphate pyrophosphokinase GO:0000287|GO:0004749|GO:0009165 KEGG: 00030+2.7.6.1|KEGG: 00230+2.7.6.1 CDA09_04025 189eed47af43c96f8dca3f06a9d6843b 316 Hamap MF_00583_B Putative ribose-phosphate pyrophosphokinase [prs]. 6 315 48.051 T 01-11-2018 IPR037515 Ribose-phosphate pyrophosphokinase, bacterial-type GO:0004749 KEGG: 00030+2.7.6.1|KEGG: 00230+2.7.6.1|Reactome: R-HSA-73843 CDA09_16465 df23628b7d268ed26c87bccf8fa72536 468 Pfam PF00330 Aconitase family (aconitate hydratase) 8 460 8.2E-152 T 01-11-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain KEGG: 00290+4.2.1.33 CDA09_16465 df23628b7d268ed26c87bccf8fa72536 468 ProSitePatterns PS00450 Aconitase family signature 1. 341 357 - T 01-11-2018 IPR018136 Aconitase family, 4Fe-4S cluster binding site KEGG: 00290+4.2.1.33 CDA09_16465 df23628b7d268ed26c87bccf8fa72536 468 PRINTS PR00415 Aconitase family signature 121 134 1.9E-41 T 01-11-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain KEGG: 00290+4.2.1.33 CDA09_16465 df23628b7d268ed26c87bccf8fa72536 468 PRINTS PR00415 Aconitase family signature 345 356 1.9E-41 T 01-11-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain KEGG: 00290+4.2.1.33 CDA09_16465 df23628b7d268ed26c87bccf8fa72536 468 PRINTS PR00415 Aconitase family signature 197 210 1.9E-41 T 01-11-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain KEGG: 00290+4.2.1.33 CDA09_16465 df23628b7d268ed26c87bccf8fa72536 468 PRINTS PR00415 Aconitase family signature 211 224 1.9E-41 T 01-11-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain KEGG: 00290+4.2.1.33 CDA09_16465 df23628b7d268ed26c87bccf8fa72536 468 PRINTS PR00415 Aconitase family signature 402 415 1.9E-41 T 01-11-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain KEGG: 00290+4.2.1.33 CDA09_16465 df23628b7d268ed26c87bccf8fa72536 468 PRINTS PR00415 Aconitase family signature 135 150 1.9E-41 T 01-11-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain KEGG: 00290+4.2.1.33 CDA09_16465 df23628b7d268ed26c87bccf8fa72536 468 PRINTS PR00415 Aconitase family signature 110 118 1.9E-41 T 01-11-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain KEGG: 00290+4.2.1.33 CDA09_16465 df23628b7d268ed26c87bccf8fa72536 468 PRINTS PR00415 Aconitase family signature 288 302 1.9E-41 T 01-11-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain KEGG: 00290+4.2.1.33 CDA09_16465 df23628b7d268ed26c87bccf8fa72536 468 SUPERFAMILY SSF53732 3 468 4.58E-160 T 01-11-2018 IPR036008 Aconitase, iron-sulfur domain KEGG: 00290+4.2.1.33 CDA09_16465 df23628b7d268ed26c87bccf8fa72536 468 Gene3D G3DSA:3.30.499.20 5 288 1.8E-95 T 01-11-2018 CDA09_16465 df23628b7d268ed26c87bccf8fa72536 468 Gene3D G3DSA:3.30.499.10 326 468 1.0E-49 T 01-11-2018 IPR015931 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha, subdomain 1/3 KEGG: 00290+4.2.1.33 CDA09_16465 df23628b7d268ed26c87bccf8fa72536 468 Hamap MF_01026 3-isopropylmalate dehydratase large subunit [leuC]. 2 468 58.56 T 01-11-2018 IPR004430 3-isopropylmalate dehydratase, large subunit GO:0003861|GO:0009098|GO:0051539 KEGG: 00290+4.2.1.33 CDA09_16465 df23628b7d268ed26c87bccf8fa72536 468 ProSitePatterns PS01244 Aconitase family signature 2. 402 415 - T 01-11-2018 IPR018136 Aconitase family, 4Fe-4S cluster binding site KEGG: 00290+4.2.1.33 CDA09_16465 df23628b7d268ed26c87bccf8fa72536 468 TIGRFAM TIGR00170 leuC: 3-isopropylmalate dehydratase, large subunit 3 468 2.2E-230 T 01-11-2018 IPR004430 3-isopropylmalate dehydratase, large subunit GO:0003861|GO:0009098|GO:0051539 KEGG: 00290+4.2.1.33 CDA09_05500 3134eb8eae1cfa0bb825691e3794b102 176 PRINTS PR00502 NUDIX hydrolase family signature 47 62 3.6E-7 T 01-11-2018 IPR020476 NUDIX hydrolase Reactome: R-HSA-2393930 CDA09_05500 3134eb8eae1cfa0bb825691e3794b102 176 PRINTS PR00502 NUDIX hydrolase family signature 33 47 3.6E-7 T 01-11-2018 IPR020476 NUDIX hydrolase Reactome: R-HSA-2393930 CDA09_05500 3134eb8eae1cfa0bb825691e3794b102 176 Hamap MF_00298 RNA pyrophosphohydrolase [rppH]. 1 156 37.968 T 01-11-2018 IPR022927 RNA pyrophosphohydrolase RppH CDA09_05500 3134eb8eae1cfa0bb825691e3794b102 176 Gene3D G3DSA:3.90.79.10 1 158 2.4E-44 T 01-11-2018 CDA09_05500 3134eb8eae1cfa0bb825691e3794b102 176 SUPERFAMILY SSF55811 6 154 1.18E-31 T 01-11-2018 IPR015797 NUDIX hydrolase-like domain superfamily GO:0016787 CDA09_05500 3134eb8eae1cfa0bb825691e3794b102 176 ProSitePatterns PS00893 Nudix box signature. 38 59 - T 01-11-2018 IPR020084 NUDIX hydrolase, conserved site GO:0016787 CDA09_05500 3134eb8eae1cfa0bb825691e3794b102 176 Pfam PF00293 NUDIX domain 7 137 5.8E-23 T 01-11-2018 IPR000086 NUDIX hydrolase domain GO:0016787 CDA09_00230 e42da2cb19efb9fd08dda89fd765b60f 690 Gene3D G3DSA:2.170.130.10 45 172 9.1E-26 T 01-11-2018 IPR037066 TonB-dependent receptor, plug domain superfamily CDA09_00230 e42da2cb19efb9fd08dda89fd765b60f 690 Gene3D G3DSA:2.40.170.20 173 667 3.4E-43 T 01-11-2018 IPR036942 TonB-dependent receptor-like, beta-barrel domain superfamily CDA09_00230 e42da2cb19efb9fd08dda89fd765b60f 690 Pfam PF07715 TonB-dependent Receptor Plug Domain 60 169 8.6E-18 T 01-11-2018 IPR012910 TonB-dependent receptor, plug domain CDA09_00230 e42da2cb19efb9fd08dda89fd765b60f 690 Pfam PF00593 TonB dependent receptor 261 657 2.5E-27 T 01-11-2018 IPR000531 TonB-dependent receptor-like, beta-barrel CDA09_00230 e42da2cb19efb9fd08dda89fd765b60f 690 SUPERFAMILY SSF56935 48 667 2.08E-83 T 01-11-2018 CDA09_15570 2f807b42b70f92772229b093e82d9d29 480 ProSitePatterns PS00687 Aldehyde dehydrogenases glutamic acid active site. 247 254 - T 01-11-2018 IPR029510 Aldehyde dehydrogenase, glutamic acid active site GO:0016491|GO:0055114 CDA09_15570 2f807b42b70f92772229b093e82d9d29 480 SUPERFAMILY SSF53720 2 476 2.62E-163 T 01-11-2018 IPR016161 Aldehyde/histidinol dehydrogenase GO:0016491|GO:0055114 CDA09_15570 2f807b42b70f92772229b093e82d9d29 480 Gene3D G3DSA:3.40.605.10 8 467 3.1E-170 T 01-11-2018 IPR016162 Aldehyde dehydrogenase, N-terminal GO:0016491|GO:0055114 CDA09_15570 2f807b42b70f92772229b093e82d9d29 480 Pfam PF00171 Aldehyde dehydrogenase family 12 469 5.2E-168 T 01-11-2018 IPR015590 Aldehyde dehydrogenase domain GO:0016491|GO:0055114 CDA09_15570 2f807b42b70f92772229b093e82d9d29 480 ProSitePatterns PS00070 Aldehyde dehydrogenases cysteine active site. 275 286 - T 01-11-2018 IPR016160 Aldehyde dehydrogenase, cysteine active site GO:0016491|GO:0055114 CDA09_15570 2f807b42b70f92772229b093e82d9d29 480 Gene3D G3DSA:3.40.309.10 252 439 3.1E-170 T 01-11-2018 IPR016163 Aldehyde dehydrogenase, C-terminal GO:0016491|GO:0016620|GO:0055114 CDA09_15800 0bb45404f88d2f62e65895bd40b3eb4f 481 Gene3D G3DSA:3.40.50.1100 117 460 3.6E-136 T 01-11-2018 CDA09_15800 0bb45404f88d2f62e65895bd40b3eb4f 481 TIGRFAM TIGR00260 thrC: threonine synthase 105 438 4.9E-69 T 01-11-2018 IPR004450 Threonine synthase-like CDA09_15800 0bb45404f88d2f62e65895bd40b3eb4f 481 SUPERFAMILY SSF53686 2 480 2.88E-153 T 01-11-2018 IPR036052 Tryptophan synthase beta subunit-like PLP-dependent enzyme CDA09_15800 0bb45404f88d2f62e65895bd40b3eb4f 481 Gene3D G3DSA:3.90.1380.10 1 94 5.3E-33 T 01-11-2018 IPR037158 Threonine synthase, N-terminal domain superfamily CDA09_15800 0bb45404f88d2f62e65895bd40b3eb4f 481 Pfam PF14821 Threonine synthase N terminus 2 79 5.7E-30 T 01-11-2018 IPR029144 Threonine synthase, N-terminal CDA09_15800 0bb45404f88d2f62e65895bd40b3eb4f 481 Pfam PF00291 Pyridoxal-phosphate dependent enzyme 111 339 6.4E-11 T 01-11-2018 IPR001926 Pyridoxal-phosphate dependent enzyme CDA09_15800 0bb45404f88d2f62e65895bd40b3eb4f 481 ProSitePatterns PS00165 Serine/threonine dehydratases pyridoxal-phosphate attachment site. 111 125 - T 01-11-2018 IPR000634 Serine/threonine dehydratase, pyridoxal-phosphate-binding site GO:0006520|GO:0030170 CDA09_15800 0bb45404f88d2f62e65895bd40b3eb4f 481 Gene3D G3DSA:3.40.50.1100 109 447 3.6E-136 T 01-11-2018 CDA09_10235 43d6a0d02a223d00f7317204a6d3112f 246 Pfam PF00196 Bacterial regulatory proteins, luxR family 185 238 1.3E-18 T 01-11-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 CDA09_10235 43d6a0d02a223d00f7317204a6d3112f 246 Gene3D G3DSA:1.10.10.10 177 242 3.3E-18 T 01-11-2018 IPR036388 Winged helix-like DNA-binding domain superfamily CDA09_10235 43d6a0d02a223d00f7317204a6d3112f 246 SMART SM00448 48 159 1.3E-26 T 01-11-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 CDA09_10235 43d6a0d02a223d00f7317204a6d3112f 246 SUPERFAMILY SSF52172 48 196 2.7E-32 T 01-11-2018 IPR011006 CheY-like superfamily CDA09_10235 43d6a0d02a223d00f7317204a6d3112f 246 SUPERFAMILY SSF46894 176 243 2.35E-18 T 01-11-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 CDA09_10235 43d6a0d02a223d00f7317204a6d3112f 246 Pfam PF00072 Response regulator receiver domain 50 159 2.2E-25 T 01-11-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 CDA09_10235 43d6a0d02a223d00f7317204a6d3112f 246 Gene3D G3DSA:3.40.50.2300 43 173 2.4E-41 T 01-11-2018 CDA09_10235 43d6a0d02a223d00f7317204a6d3112f 246 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 200 216 6.5E-13 T 01-11-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 CDA09_10235 43d6a0d02a223d00f7317204a6d3112f 246 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 216 228 6.5E-13 T 01-11-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 CDA09_10235 43d6a0d02a223d00f7317204a6d3112f 246 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 186 200 6.5E-13 T 01-11-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 CDA09_10235 43d6a0d02a223d00f7317204a6d3112f 246 SMART SM00421 183 240 5.1E-21 T 01-11-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 CDA09_10235 43d6a0d02a223d00f7317204a6d3112f 246 ProSitePatterns PS00622 LuxR-type HTH domain signature. 200 227 - T 01-11-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 CDA09_12690 ef3415dae17cf83c472cd6a1934d41ae 305 SUPERFAMILY SSF46785 4 111 5.95E-27 T 01-11-2018 IPR036390 Winged helix DNA-binding domain superfamily CDA09_12690 ef3415dae17cf83c472cd6a1934d41ae 305 Pfam PF03466 LysR substrate binding domain 87 292 4.0E-46 T 01-11-2018 IPR005119 LysR, substrate-binding CDA09_12690 ef3415dae17cf83c472cd6a1934d41ae 305 Gene3D G3DSA:1.10.10.10 3 89 3.3E-26 T 01-11-2018 IPR036388 Winged helix-like DNA-binding domain superfamily CDA09_12690 ef3415dae17cf83c472cd6a1934d41ae 305 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 18 29 2.1E-8 T 01-11-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 CDA09_12690 ef3415dae17cf83c472cd6a1934d41ae 305 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 39 50 2.1E-8 T 01-11-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 CDA09_12690 ef3415dae17cf83c472cd6a1934d41ae 305 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 29 39 2.1E-8 T 01-11-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 CDA09_12690 ef3415dae17cf83c472cd6a1934d41ae 305 Gene3D G3DSA:3.40.190.290 91 303 4.1E-42 T 01-11-2018 CDA09_12690 ef3415dae17cf83c472cd6a1934d41ae 305 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 4 62 2.0E-22 T 01-11-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 CDA09_12690 ef3415dae17cf83c472cd6a1934d41ae 305 SUPERFAMILY SSF53850 86 298 1.02E-43 T 01-11-2018 CDA09_15840 9ae6d64ce03b7bbb99125f0bf4779db2 189 SUPERFAMILY SSF54001 56 180 4.46E-42 T 01-11-2018 IPR038765 Papain-like cysteine peptidase superfamily CDA09_15840 9ae6d64ce03b7bbb99125f0bf4779db2 189 Gene3D G3DSA:3.90.1720.10 20 176 5.8E-44 T 01-11-2018 CDA09_15840 9ae6d64ce03b7bbb99125f0bf4779db2 189 Pfam PF00877 NlpC/P60 family 72 178 9.7E-31 T 01-11-2018 IPR000064 Endopeptidase, NLPC/P60 domain CDA09_14760 24fe33492f2c0f5098940d643050335d 718 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 606 713 3.3E-11 T 01-11-2018 IPR003594 Histidine kinase/HSP90-like ATPase CDA09_14760 24fe33492f2c0f5098940d643050335d 718 Gene3D G3DSA:3.30.450.40 329 471 2.7E-7 T 01-11-2018 IPR029016 GAF-like domain superfamily CDA09_14760 24fe33492f2c0f5098940d643050335d 718 SUPERFAMILY SSF109604 15 247 1.59E-60 T 01-11-2018 CDA09_14760 24fe33492f2c0f5098940d643050335d 718 SUPERFAMILY SSF55874 561 714 1.07E-23 T 01-11-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily CDA09_14760 24fe33492f2c0f5098940d643050335d 718 Gene3D G3DSA:3.30.565.10 561 717 4.1E-27 T 01-11-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily CDA09_14760 24fe33492f2c0f5098940d643050335d 718 Gene3D G3DSA:1.10.3210.10 13 252 2.2E-65 T 01-11-2018 CDA09_14760 24fe33492f2c0f5098940d643050335d 718 SUPERFAMILY SSF55781 338 478 3.97E-7 T 01-11-2018 CDA09_14760 24fe33492f2c0f5098940d643050335d 718 PRINTS PR00344 Bacterial sensor protein C-terminal signature 676 694 3.4E-5 T 01-11-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 CDA09_14760 24fe33492f2c0f5098940d643050335d 718 PRINTS PR00344 Bacterial sensor protein C-terminal signature 647 661 3.4E-5 T 01-11-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 CDA09_14760 24fe33492f2c0f5098940d643050335d 718 PRINTS PR00344 Bacterial sensor protein C-terminal signature 700 713 3.4E-5 T 01-11-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 CDA09_14760 24fe33492f2c0f5098940d643050335d 718 SMART SM00387 605 716 1.0E-11 T 01-11-2018 IPR003594 Histidine kinase/HSP90-like ATPase CDA09_14760 24fe33492f2c0f5098940d643050335d 718 Gene3D G3DSA:1.10.287.130 499 557 9.2E-7 T 01-11-2018 CDA09_14760 24fe33492f2c0f5098940d643050335d 718 Pfam PF08668 HDOD domain 20 213 3.4E-56 T 01-11-2018 IPR013976 Metal-dependent hydrolase HDOD CDA09_04165 d64ccf9d03c844719c21fccf1b22bb91 492 Gene3D G3DSA:3.60.110.10 210 464 7.7E-15 T 01-11-2018 IPR036526 Carbon-nitrogen hydrolase superfamily CDA09_04165 d64ccf9d03c844719c21fccf1b22bb91 492 SUPERFAMILY SSF56317 210 468 1.83E-38 T 01-11-2018 IPR036526 Carbon-nitrogen hydrolase superfamily CDA09_04165 d64ccf9d03c844719c21fccf1b22bb91 492 Hamap MF_01148 Apolipoprotein N-acyltransferase [lnt]. 1 474 22.347 T 01-11-2018 IPR004563 Apolipoprotein N-acyltransferase GO:0016021|GO:0016410|GO:0042158 CDA09_04165 d64ccf9d03c844719c21fccf1b22bb91 492 Pfam PF00795 Carbon-nitrogen hydrolase 217 455 1.7E-29 T 01-11-2018 IPR003010 Carbon-nitrogen hydrolase GO:0006807 CDA09_04165 d64ccf9d03c844719c21fccf1b22bb91 492 TIGRFAM TIGR00546 lnt: apolipoprotein N-acyltransferase 54 437 5.0E-92 T 01-11-2018 IPR004563 Apolipoprotein N-acyltransferase GO:0016021|GO:0016410|GO:0042158 CDA09_00145 fd7bd9d0710c0e08a679ac0d5f18094e 303 SUPERFAMILY SSF46785 4 82 7.58E-20 T 01-11-2018 IPR036390 Winged helix DNA-binding domain superfamily CDA09_00145 fd7bd9d0710c0e08a679ac0d5f18094e 303 Gene3D G3DSA:1.10.10.10 7 91 2.2E-20 T 01-11-2018 IPR036388 Winged helix-like DNA-binding domain superfamily CDA09_00145 fd7bd9d0710c0e08a679ac0d5f18094e 303 SUPERFAMILY SSF53850 96 296 1.61E-36 T 01-11-2018 CDA09_00145 fd7bd9d0710c0e08a679ac0d5f18094e 303 Gene3D G3DSA:3.40.190.10 104 289 1.8E-54 T 01-11-2018 CDA09_00145 fd7bd9d0710c0e08a679ac0d5f18094e 303 Gene3D G3DSA:3.40.190.10 164 262 1.8E-54 T 01-11-2018 CDA09_00145 fd7bd9d0710c0e08a679ac0d5f18094e 303 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 11 66 4.0E-19 T 01-11-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 CDA09_00145 fd7bd9d0710c0e08a679ac0d5f18094e 303 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 44 55 1.7E-8 T 01-11-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 CDA09_00145 fd7bd9d0710c0e08a679ac0d5f18094e 303 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 23 34 1.7E-8 T 01-11-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 CDA09_00145 fd7bd9d0710c0e08a679ac0d5f18094e 303 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 34 44 1.7E-8 T 01-11-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 CDA09_00145 fd7bd9d0710c0e08a679ac0d5f18094e 303 Pfam PF03466 LysR substrate binding domain 92 293 1.6E-35 T 01-11-2018 IPR005119 LysR, substrate-binding CDA09_18180 38c4a9b4a7145afcd536a0036038e375 471 TIGRFAM TIGR01082 murC: UDP-N-acetylmuramate--L-alanine ligase 7 460 4.3E-166 T 01-11-2018 IPR005758 UDP-N-acetylmuramate--L-alanine ligase GO:0008763|GO:0009252 KEGG: 00471+6.3.2.8|KEGG: 00550+6.3.2.8|MetaCyc: PWY-6386|MetaCyc: PWY-6387|MetaCyc: PWY-7953 CDA09_18180 38c4a9b4a7145afcd536a0036038e375 471 Pfam PF08245 Mur ligase middle domain 110 292 3.7E-29 T 01-11-2018 IPR013221 Mur ligase, central GO:0005524|GO:0009058 CDA09_18180 38c4a9b4a7145afcd536a0036038e375 471 SUPERFAMILY SSF51984 6 92 3.27E-29 T 01-11-2018 CDA09_18180 38c4a9b4a7145afcd536a0036038e375 471 Hamap MF_00046 UDP-N-acetylmuramate--L-alanine ligase [murC]. 5 470 43.271 T 01-11-2018 IPR005758 UDP-N-acetylmuramate--L-alanine ligase GO:0008763|GO:0009252 KEGG: 00471+6.3.2.8|KEGG: 00550+6.3.2.8|MetaCyc: PWY-6386|MetaCyc: PWY-6387|MetaCyc: PWY-7953 CDA09_18180 38c4a9b4a7145afcd536a0036038e375 471 Pfam PF01225 Mur ligase family, catalytic domain 7 105 5.1E-27 T 01-11-2018 IPR000713 Mur ligase, N-terminal catalytic domain GO:0005524|GO:0009058 CDA09_18180 38c4a9b4a7145afcd536a0036038e375 471 SUPERFAMILY SSF53623 91 310 1.37E-71 T 01-11-2018 IPR036565 Mur-like, catalytic domain superfamily GO:0005524|GO:0009058 Reactome: R-HSA-196757 CDA09_18180 38c4a9b4a7145afcd536a0036038e375 471 Pfam PF02875 Mur ligase family, glutamate ligase domain 313 406 1.8E-18 T 01-11-2018 IPR004101 Mur ligase, C-terminal GO:0005524|GO:0009058|GO:0016874 CDA09_18180 38c4a9b4a7145afcd536a0036038e375 471 SUPERFAMILY SSF53244 311 463 2.93E-45 T 01-11-2018 IPR036615 Mur ligase, C-terminal domain superfamily GO:0005524|GO:0009058|GO:0016874 Reactome: R-HSA-196757 CDA09_18180 38c4a9b4a7145afcd536a0036038e375 471 Gene3D G3DSA:3.90.190.20 310 470 9.5E-45 T 01-11-2018 IPR036615 Mur ligase, C-terminal domain superfamily GO:0005524|GO:0009058|GO:0016874 Reactome: R-HSA-196757 CDA09_18180 38c4a9b4a7145afcd536a0036038e375 471 Gene3D G3DSA:3.40.50.720 7 92 1.4E-31 T 01-11-2018 CDA09_18180 38c4a9b4a7145afcd536a0036038e375 471 Gene3D G3DSA:3.40.1190.10 94 309 4.3E-80 T 01-11-2018 IPR036565 Mur-like, catalytic domain superfamily GO:0005524|GO:0009058 Reactome: R-HSA-196757 CDA09_14895 ae2491ca52a620bec2a3140161056207 677 Gene3D G3DSA:3.40.50.10190 591 676 1.1E-28 T 01-11-2018 IPR036420 BRCT domain superfamily CDA09_14895 ae2491ca52a620bec2a3140161056207 677 Gene3D G3DSA:3.30.470.90 72 324 4.3E-89 T 01-11-2018 CDA09_14895 ae2491ca52a620bec2a3140161056207 677 SUPERFAMILY SSF50249 325 407 3.94E-27 T 01-11-2018 IPR012340 Nucleic acid-binding, OB-fold CDA09_14895 ae2491ca52a620bec2a3140161056207 677 Hamap MF_01588 DNA ligase [ligA]. 8 674 54.242 T 01-11-2018 IPR001679 NAD-dependent DNA ligase GO:0003911|GO:0006260|GO:0006281 CDA09_14895 ae2491ca52a620bec2a3140161056207 677 Gene3D G3DSA:1.10.150.20 513 590 4.8E-33 T 01-11-2018 CDA09_14895 ae2491ca52a620bec2a3140161056207 677 SUPERFAMILY SSF47781 410 591 1.22E-64 T 01-11-2018 IPR010994 RuvA domain 2-like CDA09_14895 ae2491ca52a620bec2a3140161056207 677 ProSitePatterns PS01055 NAD-dependent DNA ligase signature 1. 123 152 - T 01-11-2018 IPR018239 NAD-dependent DNA ligase, active site CDA09_14895 ae2491ca52a620bec2a3140161056207 677 ProSitePatterns PS01056 NAD-dependent DNA ligase signature 2. 338 353 - T 01-11-2018 IPR033136 NAD-dependent DNA ligase, conserved site CDA09_14895 ae2491ca52a620bec2a3140161056207 677 PIRSF PIRSF001604 2 677 1.3E-235 T 01-11-2018 IPR001679 NAD-dependent DNA ligase GO:0003911|GO:0006260|GO:0006281 CDA09_14895 ae2491ca52a620bec2a3140161056207 677 Pfam PF12826 Helix-hairpin-helix motif 517 580 1.4E-26 T 01-11-2018 CDA09_14895 ae2491ca52a620bec2a3140161056207 677 TIGRFAM TIGR00575 dnlj: DNA ligase, NAD-dependent 14 669 7.8E-247 T 01-11-2018 IPR001679 NAD-dependent DNA ligase GO:0003911|GO:0006260|GO:0006281 CDA09_14895 ae2491ca52a620bec2a3140161056207 677 SUPERFAMILY SSF56091 9 323 3.08E-111 T 01-11-2018 CDA09_14895 ae2491ca52a620bec2a3140161056207 677 SUPERFAMILY SSF52113 604 676 3.63E-20 T 01-11-2018 IPR036420 BRCT domain superfamily CDA09_14895 ae2491ca52a620bec2a3140161056207 677 Pfam PF00533 BRCA1 C Terminus (BRCT) domain 604 674 1.1E-14 T 01-11-2018 IPR001357 BRCT domain CDA09_14895 ae2491ca52a620bec2a3140161056207 677 Pfam PF01653 NAD-dependent DNA ligase adenylation domain 10 325 1.5E-113 T 01-11-2018 IPR013839 NAD-dependent DNA ligase, adenylation GO:0003911 CDA09_14895 ae2491ca52a620bec2a3140161056207 677 Gene3D G3DSA:2.20.70.80 398 438 3.9E-17 T 01-11-2018 CDA09_14895 ae2491ca52a620bec2a3140161056207 677 SMART SM00532 9 455 5.7E-249 T 01-11-2018 IPR013840 NAD-dependent DNA ligase, N-terminal GO:0003911 CDA09_14895 ae2491ca52a620bec2a3140161056207 677 Pfam PF03120 NAD-dependent DNA ligase OB-fold domain 329 404 3.4E-33 T 01-11-2018 IPR004150 NAD-dependent DNA ligase, OB-fold GO:0003911|GO:0006260|GO:0006281 CDA09_14895 ae2491ca52a620bec2a3140161056207 677 SMART SM00292 600 677 5.8E-15 T 01-11-2018 IPR001357 BRCT domain CDA09_14895 ae2491ca52a620bec2a3140161056207 677 Pfam PF14520 Helix-hairpin-helix domain 455 508 2.1E-5 T 01-11-2018 CDA09_14895 ae2491ca52a620bec2a3140161056207 677 Gene3D G3DSA:2.40.50.140 325 396 4.8E-32 T 01-11-2018 CDA09_14895 ae2491ca52a620bec2a3140161056207 677 Gene3D G3DSA:1.10.287.610 8 71 2.1E-29 T 01-11-2018 CDA09_14895 ae2491ca52a620bec2a3140161056207 677 Gene3D G3DSA:1.10.150.20 439 512 6.1E-30 T 01-11-2018 CDA09_14895 ae2491ca52a620bec2a3140161056207 677 SMART SM00278 519 538 240.0 T 01-11-2018 IPR003583 Helix-hairpin-helix DNA-binding motif, class 1 GO:0003677|GO:0006281 CDA09_14895 ae2491ca52a620bec2a3140161056207 677 SMART SM00278 487 506 160.0 T 01-11-2018 IPR003583 Helix-hairpin-helix DNA-binding motif, class 1 GO:0003677|GO:0006281 CDA09_14895 ae2491ca52a620bec2a3140161056207 677 SMART SM00278 453 472 9.9 T 01-11-2018 IPR003583 Helix-hairpin-helix DNA-binding motif, class 1 GO:0003677|GO:0006281 CDA09_14895 ae2491ca52a620bec2a3140161056207 677 SMART SM00278 551 570 1.5 T 01-11-2018 IPR003583 Helix-hairpin-helix DNA-binding motif, class 1 GO:0003677|GO:0006281 CDA09_14895 ae2491ca52a620bec2a3140161056207 677 Pfam PF03119 NAD-dependent DNA ligase C4 zinc finger domain 414 441 3.3E-10 T 01-11-2018 IPR004149 Zinc-finger, NAD-dependent DNA ligase C4-type GO:0003911|GO:0006260|GO:0006281 CDA09_12120 160940c9af4f306307053fb3f9794082 830 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 227 238 - T 01-11-2018 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site CDA09_12120 160940c9af4f306307053fb3f9794082 830 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 349 644 6.3E-28 T 01-11-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 CDA09_12120 160940c9af4f306307053fb3f9794082 830 Pfam PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster 257 331 4.7E-14 T 01-11-2018 IPR028261 Dihydroprymidine dehydrogenase domain II Reactome: R-HSA-73621 CDA09_12120 160940c9af4f306307053fb3f9794082 830 Gene3D G3DSA:3.10.20.740 8 139 7.9E-32 T 01-11-2018 CDA09_12120 160940c9af4f306307053fb3f9794082 830 Pfam PF12838 4Fe-4S dicluster domain 181 241 7.5E-8 T 01-11-2018 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain CDA09_12120 160940c9af4f306307053fb3f9794082 830 SUPERFAMILY SSF51971 346 592 1.82E-53 T 01-11-2018 CDA09_12120 160940c9af4f306307053fb3f9794082 830 Gene3D G3DSA:3.50.50.60 563 657 5.6E-8 T 01-11-2018 IPR036188 FAD/NAD(P)-binding domain superfamily CDA09_12120 160940c9af4f306307053fb3f9794082 830 Gene3D G3DSA:1.10.1060.10 250 346 1.4E-20 T 01-11-2018 IPR009051 Alpha-helical ferredoxin GO:0051536 CDA09_12120 160940c9af4f306307053fb3f9794082 830 Pfam PF13510 2Fe-2S iron-sulfur cluster binding domain 6 89 4.1E-18 T 01-11-2018 CDA09_12120 160940c9af4f306307053fb3f9794082 830 SUPERFAMILY SSF51971 568 647 2.24E-7 T 01-11-2018 CDA09_12120 160940c9af4f306307053fb3f9794082 830 Gene3D G3DSA:3.30.70.20 163 245 4.2E-15 T 01-11-2018 CDA09_12120 160940c9af4f306307053fb3f9794082 830 SUPERFAMILY SSF46548 257 358 1.67E-19 T 01-11-2018 IPR009051 Alpha-helical ferredoxin GO:0051536 CDA09_12120 160940c9af4f306307053fb3f9794082 830 SUPERFAMILY SSF54292 8 121 2.63E-29 T 01-11-2018 IPR036010 2Fe-2S ferredoxin-like superfamily GO:0009055|GO:0051536 CDA09_12120 160940c9af4f306307053fb3f9794082 830 PRINTS PR00419 Adrenodoxin reductase family signature 372 385 2.0E-15 T 01-11-2018 CDA09_12120 160940c9af4f306307053fb3f9794082 830 PRINTS PR00419 Adrenodoxin reductase family signature 483 497 2.0E-15 T 01-11-2018 CDA09_12120 160940c9af4f306307053fb3f9794082 830 PRINTS PR00419 Adrenodoxin reductase family signature 349 371 2.0E-15 T 01-11-2018 CDA09_12120 160940c9af4f306307053fb3f9794082 830 Gene3D G3DSA:3.50.50.60 347 463 1.4E-31 T 01-11-2018 IPR036188 FAD/NAD(P)-binding domain superfamily CDA09_12120 160940c9af4f306307053fb3f9794082 830 Gene3D G3DSA:3.50.50.60 464 562 3.2E-15 T 01-11-2018 IPR036188 FAD/NAD(P)-binding domain superfamily CDA09_12120 160940c9af4f306307053fb3f9794082 830 SUPERFAMILY SSF54862 89 246 5.02E-18 T 01-11-2018 CDA09_06265 1ea472206596b5d75b6aaf0d2b410f93 352 PIRSF PIRSF006004 2 342 4.8E-85 T 01-11-2018 IPR004383 Ribosomal RNA large subunit methyltransferase RlmN/Cfr GO:0005737|GO:0006364|GO:0008173 CDA09_06265 1ea472206596b5d75b6aaf0d2b410f93 352 Pfam PF04055 Radical SAM superfamily 101 260 1.1E-9 T 01-11-2018 IPR007197 Radical SAM GO:0003824|GO:0051536 CDA09_06265 1ea472206596b5d75b6aaf0d2b410f93 352 SUPERFAMILY SSF102114 99 286 1.24E-12 T 01-11-2018 CDA09_06265 1ea472206596b5d75b6aaf0d2b410f93 352 Gene3D G3DSA:3.20.20.70 63 317 5.5E-67 T 01-11-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 CDA09_12520 ddb63592cf08d839897f15bb2c0954bd 788 Gene3D G3DSA:3.20.20.60 475 785 1.9E-99 T 01-11-2018 CDA09_12520 ddb63592cf08d839897f15bb2c0954bd 788 ProSitePatterns PS00370 PEP-utilizing enzymes phosphorylation site signature. 411 422 - T 01-11-2018 IPR018274 PEP-utilising enzyme, active site GO:0016310|GO:0016772 CDA09_12520 ddb63592cf08d839897f15bb2c0954bd 788 SUPERFAMILY SSF52009 345 464 3.01E-35 T 01-11-2018 IPR036637 Phosphohistidine domain superfamily GO:0016310|GO:0016772 CDA09_12520 ddb63592cf08d839897f15bb2c0954bd 788 PIRSF PIRSF000854 1 788 0.0 T 01-11-2018 IPR006319 Phosphoenolpyruvate synthase GO:0006090|GO:0008986 KEGG: 00620+2.7.9.2|KEGG: 00680+2.7.9.2|KEGG: 00720+2.7.9.2|MetaCyc: PWY-5484|MetaCyc: PWY-6142 CDA09_12520 ddb63592cf08d839897f15bb2c0954bd 788 Gene3D G3DSA:3.30.470.20 191 354 4.0E-60 T 01-11-2018 CDA09_12520 ddb63592cf08d839897f15bb2c0954bd 788 Pfam PF02896 PEP-utilising enzyme, TIM barrel domain 478 778 2.9E-60 T 01-11-2018 IPR000121 PEP-utilising enzyme, C-terminal GO:0016310|GO:0016772 CDA09_12520 ddb63592cf08d839897f15bb2c0954bd 788 ProSitePatterns PS00742 PEP-utilizing enzymes signature 2. 691 709 - T 01-11-2018 IPR023151 PEP-utilising enzyme, conserved site GO:0016772 CDA09_12520 ddb63592cf08d839897f15bb2c0954bd 788 Gene3D G3DSA:3.30.1490.20 1 190 6.2E-72 T 01-11-2018 IPR013815 ATP-grasp fold, subdomain 1 GO:0005524 CDA09_12520 ddb63592cf08d839897f15bb2c0954bd 788 Pfam PF00391 PEP-utilising enzyme, mobile domain 381 452 2.1E-26 T 01-11-2018 IPR008279 PEP-utilising enzyme, mobile domain GO:0016310|GO:0016772 CDA09_12520 ddb63592cf08d839897f15bb2c0954bd 788 TIGRFAM TIGR01418 PEP_synth: phosphoenolpyruvate synthase 5 783 0.0 T 01-11-2018 IPR006319 Phosphoenolpyruvate synthase GO:0006090|GO:0008986 KEGG: 00620+2.7.9.2|KEGG: 00680+2.7.9.2|KEGG: 00720+2.7.9.2|MetaCyc: PWY-5484|MetaCyc: PWY-6142 CDA09_12520 ddb63592cf08d839897f15bb2c0954bd 788 Pfam PF01326 Pyruvate phosphate dikinase, PEP/pyruvate binding domain 17 339 1.1E-118 T 01-11-2018 IPR002192 Pyruvate phosphate dikinase, PEP/pyruvate-binding GO:0005524|GO:0016301|GO:0016310 CDA09_12520 ddb63592cf08d839897f15bb2c0954bd 788 SUPERFAMILY SSF56059 1 381 5.42E-109 T 01-11-2018 CDA09_12520 ddb63592cf08d839897f15bb2c0954bd 788 SUPERFAMILY SSF51621 458 784 7.33E-96 T 01-11-2018 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain superfamily GO:0003824 CDA09_12520 ddb63592cf08d839897f15bb2c0954bd 788 Gene3D G3DSA:3.50.30.10 357 474 3.4E-41 T 01-11-2018 CDA09_21755 6f6fb231664216432db10e2fd4a6443a 341 SUPERFAMILY SSF52518 19 341 3.25E-84 T 01-11-2018 IPR029061 Thiamin diphosphate-binding fold CDA09_21755 6f6fb231664216432db10e2fd4a6443a 341 Gene3D G3DSA:3.40.50.970 78 235 1.5E-25 T 01-11-2018 CDA09_21755 6f6fb231664216432db10e2fd4a6443a 341 Pfam PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain 56 203 3.6E-32 T 01-11-2018 IPR011766 Thiamine pyrophosphate enzyme, C-terminal TPP-binding GO:0003824|GO:0030976 CDA09_11855 a7cbc2f4d64df695b8059656d61e313b 326 Pfam PF02779 Transketolase, pyrimidine binding domain 4 178 2.0E-47 T 01-11-2018 IPR005475 Transketolase-like, pyrimidine-binding domain CDA09_11855 a7cbc2f4d64df695b8059656d61e313b 326 SUPERFAMILY SSF52518 4 192 3.69E-69 T 01-11-2018 IPR029061 Thiamin diphosphate-binding fold CDA09_11855 a7cbc2f4d64df695b8059656d61e313b 326 Gene3D G3DSA:3.40.50.970 2 191 3.3E-78 T 01-11-2018 CDA09_11855 a7cbc2f4d64df695b8059656d61e313b 326 Gene3D G3DSA:3.40.50.920 192 325 9.5E-46 T 01-11-2018 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II GO:0003824 CDA09_11855 a7cbc2f4d64df695b8059656d61e313b 326 SMART SM00861 4 179 1.5E-68 T 01-11-2018 IPR005475 Transketolase-like, pyrimidine-binding domain CDA09_11855 a7cbc2f4d64df695b8059656d61e313b 326 Pfam PF02780 Transketolase, C-terminal domain 199 315 4.3E-37 T 01-11-2018 IPR033248 Transketolase, C-terminal domain CDA09_11855 a7cbc2f4d64df695b8059656d61e313b 326 SUPERFAMILY SSF52922 190 323 1.7E-39 T 01-11-2018 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II GO:0003824 CDA09_02125 8ceb3ce458f3dbe657d0e0fed027eaf9 116 Pfam PF13467 Ribbon-helix-helix domain 16 83 1.2E-23 T 01-11-2018 IPR027373 Ribbon-helix-helix domain CDA09_02125 8ceb3ce458f3dbe657d0e0fed027eaf9 116 Gene3D G3DSA:1.10.3990.20 8 111 1.8E-32 T 01-11-2018 IPR038268 Ribbon-helix-helix domain superfamily CDA09_15755 07afaeeaee5832999081de49469ca2d8 212 ProSitePatterns PS00381 Endopeptidase Clp serine active site. 106 117 - T 01-11-2018 IPR018215 ClpP, Ser active site CDA09_15755 07afaeeaee5832999081de49469ca2d8 212 Pfam PF00574 Clp protease 29 208 1.6E-90 T 01-11-2018 IPR023562 Clp protease proteolytic subunit /Translocation-enhancing protein TepA CDA09_15755 07afaeeaee5832999081de49469ca2d8 212 Hamap MF_00444 ATP-dependent Clp protease proteolytic subunit [clpP]. 19 209 45.199 T 01-11-2018 IPR001907 ATP-dependent Clp protease proteolytic subunit GO:0004252|GO:0006508 CDA09_15755 07afaeeaee5832999081de49469ca2d8 212 Gene3D G3DSA:3.90.226.10 9 211 4.6E-85 T 01-11-2018 CDA09_15755 07afaeeaee5832999081de49469ca2d8 212 ProSitePatterns PS00382 Endopeptidase Clp histidine active site. 128 141 - T 01-11-2018 IPR033135 ClpP, histidine active site CDA09_15755 07afaeeaee5832999081de49469ca2d8 212 SUPERFAMILY SSF52096 27 210 4.16E-76 T 01-11-2018 IPR029045 ClpP/crotonase-like domain superfamily CDA09_15755 07afaeeaee5832999081de49469ca2d8 212 TIGRFAM TIGR00493 clpP: ATP-dependent Clp endopeptidase, proteolytic subunit ClpP 18 207 3.2E-107 T 01-11-2018 IPR001907 ATP-dependent Clp protease proteolytic subunit GO:0004252|GO:0006508 CDA09_15755 07afaeeaee5832999081de49469ca2d8 212 PRINTS PR00127 Clp protease catalytic subunit P signature 35 50 1.8E-53 T 01-11-2018 IPR001907 ATP-dependent Clp protease proteolytic subunit GO:0004252|GO:0006508 CDA09_15755 07afaeeaee5832999081de49469ca2d8 212 PRINTS PR00127 Clp protease catalytic subunit P signature 75 95 1.8E-53 T 01-11-2018 IPR001907 ATP-dependent Clp protease proteolytic subunit GO:0004252|GO:0006508 CDA09_15755 07afaeeaee5832999081de49469ca2d8 212 PRINTS PR00127 Clp protease catalytic subunit P signature 184 203 1.8E-53 T 01-11-2018 IPR001907 ATP-dependent Clp protease proteolytic subunit GO:0004252|GO:0006508 CDA09_15755 07afaeeaee5832999081de49469ca2d8 212 PRINTS PR00127 Clp protease catalytic subunit P signature 127 146 1.8E-53 T 01-11-2018 IPR001907 ATP-dependent Clp protease proteolytic subunit GO:0004252|GO:0006508 CDA09_15755 07afaeeaee5832999081de49469ca2d8 212 PRINTS PR00127 Clp protease catalytic subunit P signature 106 123 1.8E-53 T 01-11-2018 IPR001907 ATP-dependent Clp protease proteolytic subunit GO:0004252|GO:0006508 CDA09_20625 bdd91ef8bd373eb95f00d50e88219164 426 TIGRFAM TIGR02034 CysN: sulfate adenylyltransferase, large subunit 15 425 1.4E-170 T 01-11-2018 IPR011779 Sulphate adenylyltransferase, large subunit GO:0006790 KEGG: 00230+2.7.7.4|KEGG: 00261+2.7.7.4|KEGG: 00450+2.7.7.4|KEGG: 00920+2.7.7.4|MetaCyc: PWY-5278|MetaCyc: PWY-5340|MetaCyc: PWY-6683|MetaCyc: PWY-6932 CDA09_20625 bdd91ef8bd373eb95f00d50e88219164 426 ProSitePatterns PS00301 Translational (tr)-type guanine nucleotide-binding (G) domain signature. 68 83 - T 01-11-2018 IPR031157 Tr-type G domain, conserved site CDA09_20625 bdd91ef8bd373eb95f00d50e88219164 426 Gene3D G3DSA:2.40.30.10 322 425 2.1E-35 T 01-11-2018 CDA09_20625 bdd91ef8bd373eb95f00d50e88219164 426 SUPERFAMILY SSF52540 14 228 6.04E-54 T 01-11-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CDA09_20625 bdd91ef8bd373eb95f00d50e88219164 426 Gene3D G3DSA:2.40.30.10 226 320 1.1E-22 T 01-11-2018 CDA09_20625 bdd91ef8bd373eb95f00d50e88219164 426 Pfam PF00009 Elongation factor Tu GTP binding domain 15 211 2.0E-40 T 01-11-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 CDA09_20625 bdd91ef8bd373eb95f00d50e88219164 426 SUPERFAMILY SSF50447 228 319 3.31E-18 T 01-11-2018 IPR009000 Translation protein, beta-barrel domain superfamily CDA09_20625 bdd91ef8bd373eb95f00d50e88219164 426 PRINTS PR00315 GTP-binding elongation factor signature 95 105 1.4E-11 T 01-11-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 CDA09_20625 bdd91ef8bd373eb95f00d50e88219164 426 PRINTS PR00315 GTP-binding elongation factor signature 75 83 1.4E-11 T 01-11-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 CDA09_20625 bdd91ef8bd373eb95f00d50e88219164 426 PRINTS PR00315 GTP-binding elongation factor signature 16 29 1.4E-11 T 01-11-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 CDA09_20625 bdd91ef8bd373eb95f00d50e88219164 426 PRINTS PR00315 GTP-binding elongation factor signature 148 157 1.4E-11 T 01-11-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 CDA09_20625 bdd91ef8bd373eb95f00d50e88219164 426 PRINTS PR00315 GTP-binding elongation factor signature 111 122 1.4E-11 T 01-11-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 CDA09_20625 bdd91ef8bd373eb95f00d50e88219164 426 SUPERFAMILY SSF50465 325 425 5.76E-33 T 01-11-2018 IPR009001 Translation elongation factor EF1A/initiation factor IF2gamma, C-terminal CDA09_20625 bdd91ef8bd373eb95f00d50e88219164 426 Gene3D G3DSA:3.40.50.300 7 222 1.5E-64 T 01-11-2018 CDA09_05705 d686a236857a3ed0520ae3e381c76d1e 284 ProSitePatterns PS01307 Flagellar motor protein motA family signature. 204 221 - T 01-11-2018 IPR000540 Flagellar motor protein MotA, conserved site CDA09_05705 d686a236857a3ed0520ae3e381c76d1e 284 Pfam PF01618 MotA/TolQ/ExbB proton channel family 138 234 1.8E-9 T 01-11-2018 IPR002898 MotA/TolQ/ExbB proton channel CDA09_05705 d686a236857a3ed0520ae3e381c76d1e 284 TIGRFAM TIGR03818 MotA1: flagellar motor stator protein MotA 2 280 1.7E-111 T 01-11-2018 IPR022522 Flagellar motor stator, MotA CDA09_17440 1361348f35a276216eaac34f7d6273e9 103 ProSitePatterns PS00045 Bacterial histone-like DNA-binding proteins signature. 50 69 - T 01-11-2018 IPR020816 Histone-like DNA-binding protein, conserved site GO:0003677 CDA09_17440 1361348f35a276216eaac34f7d6273e9 103 TIGRFAM TIGR00987 himA: integration host factor, alpha subunit 4 97 6.1E-45 T 01-11-2018 IPR005684 Integration host factor, alpha subunit GO:0003677|GO:0006310|GO:0006355 CDA09_17440 1361348f35a276216eaac34f7d6273e9 103 SMART SM00411 5 94 3.1E-41 T 01-11-2018 IPR000119 Histone-like DNA-binding protein GO:0003677 CDA09_17440 1361348f35a276216eaac34f7d6273e9 103 Hamap MF_00380 Integration host factor subunit alpha [ihfA]. 3 99 30.395 T 01-11-2018 IPR005684 Integration host factor, alpha subunit GO:0003677|GO:0006310|GO:0006355 CDA09_17440 1361348f35a276216eaac34f7d6273e9 103 Gene3D G3DSA:4.10.520.10 3 99 6.0E-36 T 01-11-2018 IPR010992 Integration host factor (IHF)-like DNA-binding domain superfamily GO:0003677 CDA09_17440 1361348f35a276216eaac34f7d6273e9 103 Pfam PF00216 Bacterial DNA-binding protein 5 93 5.7E-30 T 01-11-2018 IPR000119 Histone-like DNA-binding protein GO:0003677 CDA09_17440 1361348f35a276216eaac34f7d6273e9 103 SUPERFAMILY SSF47729 5 95 6.33E-31 T 01-11-2018 IPR010992 Integration host factor (IHF)-like DNA-binding domain superfamily GO:0003677 CDA09_17440 1361348f35a276216eaac34f7d6273e9 103 PRINTS PR01727 Prokaryotic integration host factor signature 62 75 1.8E-14 T 01-11-2018 IPR000119 Histone-like DNA-binding protein GO:0003677 CDA09_17440 1361348f35a276216eaac34f7d6273e9 103 PRINTS PR01727 Prokaryotic integration host factor signature 44 59 1.8E-14 T 01-11-2018 IPR000119 Histone-like DNA-binding protein GO:0003677 CDA09_17440 1361348f35a276216eaac34f7d6273e9 103 PRINTS PR01727 Prokaryotic integration host factor signature 78 92 1.8E-14 T 01-11-2018 IPR000119 Histone-like DNA-binding protein GO:0003677 CDA09_18750 beab12de94c7179349c335fb1975e8f0 425 SUPERFAMILY SSF51338 1 422 1.73E-28 T 01-11-2018 IPR011059 Metal-dependent hydrolase, composite domain superfamily GO:0016810 CDA09_18750 beab12de94c7179349c335fb1975e8f0 425 Gene3D G3DSA:3.20.20.140 57 368 2.7E-109 T 01-11-2018 CDA09_18750 beab12de94c7179349c335fb1975e8f0 425 Gene3D G3DSA:2.30.40.10 9 420 2.7E-109 T 01-11-2018 IPR011059 Metal-dependent hydrolase, composite domain superfamily GO:0016810 CDA09_18750 beab12de94c7179349c335fb1975e8f0 425 TIGRFAM TIGR00857 pyrC_multi: dihydroorotase, multifunctional complex type 20 422 2.1E-88 T 01-11-2018 CDA09_18750 beab12de94c7179349c335fb1975e8f0 425 Pfam PF01979 Amidohydrolase family 205 420 1.6E-13 T 01-11-2018 IPR006680 Amidohydrolase-related GO:0016787 CDA09_18750 beab12de94c7179349c335fb1975e8f0 425 SUPERFAMILY SSF51556 56 366 5.45E-83 T 01-11-2018 IPR032466 Metal-dependent hydrolase CDA09_12450 81553ada866647c931634269786c3ea5 134 Gene3D G3DSA:3.10.129.10 6 134 3.6E-40 T 01-11-2018 CDA09_12450 81553ada866647c931634269786c3ea5 134 Pfam PF13279 Thioesterase-like superfamily 15 130 6.6E-14 T 01-11-2018 CDA09_12450 81553ada866647c931634269786c3ea5 134 SUPERFAMILY SSF54637 6 134 6.91E-36 T 01-11-2018 IPR029069 HotDog domain superfamily CDA09_11150 2df007c7f138d7d182df002b33c09933 293 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 39 50 1.4E-8 T 01-11-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 CDA09_11150 2df007c7f138d7d182df002b33c09933 293 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 29 39 1.4E-8 T 01-11-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 CDA09_11150 2df007c7f138d7d182df002b33c09933 293 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 18 29 1.4E-8 T 01-11-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 CDA09_11150 2df007c7f138d7d182df002b33c09933 293 Gene3D G3DSA:1.10.10.10 1 91 3.6E-26 T 01-11-2018 IPR036388 Winged helix-like DNA-binding domain superfamily CDA09_11150 2df007c7f138d7d182df002b33c09933 293 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 3 62 5.1E-22 T 01-11-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 CDA09_11150 2df007c7f138d7d182df002b33c09933 293 SUPERFAMILY SSF46785 1 86 1.22E-23 T 01-11-2018 IPR036390 Winged helix DNA-binding domain superfamily CDA09_11150 2df007c7f138d7d182df002b33c09933 293 Pfam PF03466 LysR substrate binding domain 87 290 7.5E-25 T 01-11-2018 IPR005119 LysR, substrate-binding CDA09_11150 2df007c7f138d7d182df002b33c09933 293 Gene3D G3DSA:3.40.190.290 92 291 1.2E-18 T 01-11-2018 CDA09_11150 2df007c7f138d7d182df002b33c09933 293 SUPERFAMILY SSF53850 88 291 3.53E-26 T 01-11-2018 CDA09_17285 53abb35fb8a6517c308c356e0d0742bb 255 SUPERFAMILY SSF160467 11 105 9.68E-17 T 01-11-2018 CDA09_17285 53abb35fb8a6517c308c356e0d0742bb 255 Gene3D G3DSA:2.40.100.10 100 239 3.2E-51 T 01-11-2018 IPR029000 Cyclophilin-like domain superfamily CDA09_17285 53abb35fb8a6517c308c356e0d0742bb 255 TIGRFAM TIGR00370 TIGR00370: sensor histidine kinase inhibitor, KipI family 15 221 1.5E-46 T 01-11-2018 IPR010016 KipI family KEGG: 00480+3.5.2.9|MetaCyc: PWY-4041|MetaCyc: PWY-7942 CDA09_17285 53abb35fb8a6517c308c356e0d0742bb 255 Pfam PF02682 Carboxyltransferase domain, subdomain C and D 11 215 1.0E-64 T 01-11-2018 IPR003833 Carboxyltransferase domain, subdomain C and D CDA09_17285 53abb35fb8a6517c308c356e0d0742bb 255 Gene3D G3DSA:3.30.1360.40 12 90 1.4E-19 T 01-11-2018 CDA09_17285 53abb35fb8a6517c308c356e0d0742bb 255 SMART SM00796 10 215 3.7E-74 T 01-11-2018 IPR003833 Carboxyltransferase domain, subdomain C and D CDA09_17285 53abb35fb8a6517c308c356e0d0742bb 255 SUPERFAMILY SSF50891 100 231 2.24E-39 T 01-11-2018 IPR029000 Cyclophilin-like domain superfamily CDA09_20770 7c4615daf1b6688c6b3857ac46e190ca 150 Gene3D G3DSA:1.10.260.40 16 111 6.2E-16 T 01-11-2018 CDA09_20770 7c4615daf1b6688c6b3857ac46e190ca 150 Pfam PF01381 Helix-turn-helix 60 97 2.6E-8 T 01-11-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 CDA09_20770 7c4615daf1b6688c6b3857ac46e190ca 150 SUPERFAMILY SSF47413 57 99 3.92E-10 T 01-11-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 CDA09_17165 e6e92eccf256adf87d088a6729c62540 240 Gene3D G3DSA:3.40.50.150 1 232 6.8E-42 T 01-11-2018 CDA09_17165 e6e92eccf256adf87d088a6729c62540 240 Pfam PF13649 Methyltransferase domain 27 121 1.0E-9 T 01-11-2018 CDA09_17165 e6e92eccf256adf87d088a6729c62540 240 SUPERFAMILY SSF53335 4 233 9.97E-26 T 01-11-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase CDA09_13240 474a1f010bc40e1db9452fa3fa36d245 89 TIGRFAM TIGR00008 infA: translation initiation factor IF-1 3 71 2.3E-31 T 01-11-2018 IPR004368 Translation initiation factor IF-1 GO:0003743|GO:0006413 CDA09_13240 474a1f010bc40e1db9452fa3fa36d245 89 SUPERFAMILY SSF50249 1 74 1.18E-25 T 01-11-2018 IPR012340 Nucleic acid-binding, OB-fold CDA09_13240 474a1f010bc40e1db9452fa3fa36d245 89 Pfam PF01176 Translation initiation factor 1A / IF-1 8 70 1.5E-23 T 01-11-2018 IPR006196 RNA-binding domain, S1, IF1 type GO:0003723|GO:0003743|GO:0006413 CDA09_13240 474a1f010bc40e1db9452fa3fa36d245 89 Hamap MF_00075 Translation initiation factor IF-1 [infA]. 1 72 26.217 T 01-11-2018 IPR004368 Translation initiation factor IF-1 GO:0003743|GO:0006413 CDA09_13240 474a1f010bc40e1db9452fa3fa36d245 89 SMART SM00316 4 72 0.0025 T 01-11-2018 IPR022967 RNA-binding domain, S1 CDA09_13240 474a1f010bc40e1db9452fa3fa36d245 89 Gene3D G3DSA:2.40.50.140 1 72 4.2E-32 T 01-11-2018 CDA09_07545 7e28994bf1785e7696a492313c3124b0 332 TIGRFAM TIGR04003 rSAM_BssD: [benzylsuccinate synthase]-activating enzyme 4 316 3.8E-193 T 01-11-2018 IPR023880 Benzylsuccinate synthase activating enzyme GO:0018805 CDA09_07545 7e28994bf1785e7696a492313c3124b0 332 Pfam PF04055 Radical SAM superfamily 24 242 4.8E-27 T 01-11-2018 IPR007197 Radical SAM GO:0003824|GO:0051536 CDA09_07545 7e28994bf1785e7696a492313c3124b0 332 SUPERFAMILY SSF54862 6 154 2.3E-21 T 01-11-2018 CDA09_07545 7e28994bf1785e7696a492313c3124b0 332 PIRSF PIRSF000371 1 310 7.0E-127 T 01-11-2018 IPR012839 Organic radical enzyme activase GO:0016491|GO:0055114 CDA09_07545 7e28994bf1785e7696a492313c3124b0 332 TIGRFAM TIGR02494 PFLE_PFLC: glycyl-radical enzyme activating protein 6 281 1.4E-107 T 01-11-2018 CDA09_07545 7e28994bf1785e7696a492313c3124b0 332 SUPERFAMILY SSF102114 91 272 6.67E-19 T 01-11-2018 CDA09_07545 7e28994bf1785e7696a492313c3124b0 332 Gene3D G3DSA:3.30.70.20 53 106 8.1E-10 T 01-11-2018 CDA09_07545 7e28994bf1785e7696a492313c3124b0 332 Gene3D G3DSA:3.20.20.70 3 52 3.5E-17 T 01-11-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 CDA09_07545 7e28994bf1785e7696a492313c3124b0 332 ProSitePatterns PS01087 Radical activating enzymes signature. 17 38 - T 01-11-2018 IPR001989 Radical-activating enzyme, conserved site GO:0016491|GO:0051539|GO:0055114 CDA09_07545 7e28994bf1785e7696a492313c3124b0 332 Pfam PF13353 4Fe-4S single cluster domain 16 191 1.5E-12 T 01-11-2018 CDA09_07545 7e28994bf1785e7696a492313c3124b0 332 Gene3D G3DSA:3.80.30.10 128 311 5.6E-47 T 01-11-2018 CDA09_07545 7e28994bf1785e7696a492313c3124b0 332 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 55 66 - T 01-11-2018 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site CDA09_03005 2d407ae5b9d67ec0cfb4424af5389a56 357 SUPERFAMILY SSF55103 171 355 1.34E-23 T 01-11-2018 IPR016164 FAD-linked oxidase-like, C-terminal GO:0003824|GO:0050660 CDA09_03005 2d407ae5b9d67ec0cfb4424af5389a56 357 Gene3D G3DSA:3.30.465.10 51 170 1.4E-32 T 01-11-2018 IPR016169 FAD-binding, type PCMH, subdomain 2 CDA09_03005 2d407ae5b9d67ec0cfb4424af5389a56 357 SUPERFAMILY SSF56176 6 171 3.08E-30 T 01-11-2018 IPR036318 FAD-binding, type PCMH-like superfamily GO:0050660 CDA09_03005 2d407ae5b9d67ec0cfb4424af5389a56 357 Pfam PF02913 FAD linked oxidases, C-terminal domain 332 352 2.1E-4 T 01-11-2018 IPR004113 FAD-linked oxidase, C-terminal GO:0003824|GO:0050660 CDA09_03005 2d407ae5b9d67ec0cfb4424af5389a56 357 Pfam PF01565 FAD binding domain 6 132 3.7E-20 T 01-11-2018 IPR006094 FAD linked oxidase, N-terminal GO:0016491|GO:0050660|GO:0055114 CDA09_03005 2d407ae5b9d67ec0cfb4424af5389a56 357 Gene3D G3DSA:1.10.45.10 326 353 7.9E-6 T 01-11-2018 IPR016171 Vanillyl-alcohol oxidase, C-terminal subdomain 2 CDA09_00635 16787615329c9d18027801b56b1d2ba3 660 Gene3D G3DSA:3.40.50.300 273 625 8.8E-117 T 01-11-2018 CDA09_00635 16787615329c9d18027801b56b1d2ba3 660 Hamap MF_01920 ATP-dependent DNA helicase Rep [rep]. 3 658 38.244 T 01-11-2018 IPR005752 ATP-dependent DNA helicase Rep GO:0003677|GO:0004003|GO:0005524|GO:0006268 CDA09_00635 16787615329c9d18027801b56b1d2ba3 660 SUPERFAMILY SSF52540 5 628 1.47E-160 T 01-11-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CDA09_00635 16787615329c9d18027801b56b1d2ba3 660 Gene3D G3DSA:1.10.486.10 376 537 8.8E-117 T 01-11-2018 CDA09_00635 16787615329c9d18027801b56b1d2ba3 660 Pfam PF00580 UvrD/REP helicase N-terminal domain 5 264 6.8E-70 T 01-11-2018 IPR034739 UvrD/AddA helicase, N-terminal GO:0005524 CDA09_00635 16787615329c9d18027801b56b1d2ba3 660 Gene3D G3DSA:1.10.10.160 107 182 1.4E-91 T 01-11-2018 IPR013986 DExx box DNA helicase domain superfamily CDA09_00635 16787615329c9d18027801b56b1d2ba3 660 Pfam PF13361 UvrD-like helicase C-terminal domain 270 606 2.5E-68 T 01-11-2018 IPR014017 UvrD-like DNA helicase, C-terminal GO:0005524|GO:0016787 CDA09_00635 16787615329c9d18027801b56b1d2ba3 660 Gene3D G3DSA:3.40.50.300 5 266 1.4E-91 T 01-11-2018 CDA09_06185 70c2aa35888a7ecdd4055b504280dff5 275 TIGRFAM TIGR00125 cyt_tran_rel: cytidyltransferase-like domain 19 64 9.8E-8 T 01-11-2018 IPR004821 Cytidyltransferase-like domain GO:0003824|GO:0009058 CDA09_06185 70c2aa35888a7ecdd4055b504280dff5 275 Gene3D G3DSA:3.30.1300.10 175 273 3.8E-31 T 01-11-2018 CDA09_06185 70c2aa35888a7ecdd4055b504280dff5 275 Gene3D G3DSA:3.40.50.620 2 174 1.9E-67 T 01-11-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold CDA09_06185 70c2aa35888a7ecdd4055b504280dff5 275 Hamap MF_00158 Pantothenate synthetase [panC]. 2 275 37.581 T 01-11-2018 IPR003721 Pantoate-beta-alanine ligase GO:0004592|GO:0015940 KEGG: 00410+6.3.2.1|KEGG: 00770+6.3.2.1 CDA09_06185 70c2aa35888a7ecdd4055b504280dff5 275 TIGRFAM TIGR00018 panC: pantoate--beta-alanine ligase 1 275 2.1E-91 T 01-11-2018 IPR003721 Pantoate-beta-alanine ligase GO:0004592|GO:0015940 KEGG: 00410+6.3.2.1|KEGG: 00770+6.3.2.1 CDA09_06185 70c2aa35888a7ecdd4055b504280dff5 275 Pfam PF02569 Pantoate-beta-alanine ligase 3 273 1.6E-94 T 01-11-2018 IPR003721 Pantoate-beta-alanine ligase GO:0004592|GO:0015940 KEGG: 00410+6.3.2.1|KEGG: 00770+6.3.2.1 CDA09_06185 70c2aa35888a7ecdd4055b504280dff5 275 SUPERFAMILY SSF52374 1 275 5.0E-97 T 01-11-2018 CDA09_23035 c72b15dc02f9c2fac38867aa3f0703e4 119 ProDom PD003629 P RIBONUCLEASE COMPONENT HYDROLASE RNASE C5 RNASEP RNA-BINDING PROCESSING ENDONUCLEASE 19 94 1.0E-20 T 01-11-2018 IPR000100 Ribonuclease P GO:0000049|GO:0004526|GO:0008033 CDA09_23035 c72b15dc02f9c2fac38867aa3f0703e4 119 Pfam PF00825 Ribonuclease P 14 117 9.2E-25 T 01-11-2018 IPR000100 Ribonuclease P GO:0000049|GO:0004526|GO:0008033 CDA09_23035 c72b15dc02f9c2fac38867aa3f0703e4 119 ProSitePatterns PS00648 Bacterial ribonuclease P protein component signature. 61 75 - T 01-11-2018 IPR020539 Ribonuclease P, conserved site GO:0004526 CDA09_23035 c72b15dc02f9c2fac38867aa3f0703e4 119 Gene3D G3DSA:3.30.230.10 7 118 2.4E-28 T 01-11-2018 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup CDA09_23035 c72b15dc02f9c2fac38867aa3f0703e4 119 SUPERFAMILY SSF54211 14 117 3.79E-24 T 01-11-2018 IPR020568 Ribosomal protein S5 domain 2-type fold CDA09_23035 c72b15dc02f9c2fac38867aa3f0703e4 119 TIGRFAM TIGR00188 rnpA: ribonuclease P protein component 16 117 3.6E-17 T 01-11-2018 IPR000100 Ribonuclease P GO:0000049|GO:0004526|GO:0008033 CDA09_23035 c72b15dc02f9c2fac38867aa3f0703e4 119 Hamap MF_00227 Ribonuclease P protein component [rnpA]. 11 116 14.635 T 01-11-2018 IPR000100 Ribonuclease P GO:0000049|GO:0004526|GO:0008033 CDA09_19710 d92072c65f33aad47e81f29ad26044e5 410 Pfam PF00501 AMP-binding enzyme 120 275 6.1E-12 T 01-11-2018 IPR000873 AMP-dependent synthetase/ligase GO:0003824 CDA09_19710 d92072c65f33aad47e81f29ad26044e5 410 Gene3D G3DSA:3.30.300.30 315 408 8.7E-11 T 01-11-2018 CDA09_19710 d92072c65f33aad47e81f29ad26044e5 410 Gene3D G3DSA:3.40.50.12780 2 314 1.0E-68 T 01-11-2018 CDA09_19710 d92072c65f33aad47e81f29ad26044e5 410 SUPERFAMILY SSF56801 113 380 8.9E-33 T 01-11-2018 CDA09_11575 57a2c4de2d00dcd0bc18aff874ff676e 318 SUPERFAMILY SSF52540 35 296 3.28E-37 T 01-11-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CDA09_11575 57a2c4de2d00dcd0bc18aff874ff676e 318 SMART SM00382 76 215 3.1E-7 T 01-11-2018 IPR003593 AAA+ ATPase domain CDA09_11575 57a2c4de2d00dcd0bc18aff874ff676e 318 TIGRFAM TIGR02880 cbbX_cfxQ: CbbX protein 20 302 1.2E-154 T 01-11-2018 IPR000470 CbxX/CfqX, monofunctional GO:0005524 CDA09_11575 57a2c4de2d00dcd0bc18aff874ff676e 318 Gene3D G3DSA:3.40.50.300 14 212 9.5E-58 T 01-11-2018 CDA09_11575 57a2c4de2d00dcd0bc18aff874ff676e 318 Gene3D G3DSA:1.10.8.60 213 304 2.3E-25 T 01-11-2018 CDA09_11575 57a2c4de2d00dcd0bc18aff874ff676e 318 Pfam PF00004 ATPase family associated with various cellular activities (AAA) 81 212 1.5E-16 T 01-11-2018 IPR003959 ATPase, AAA-type, core GO:0005524 CDA09_11575 57a2c4de2d00dcd0bc18aff874ff676e 318 PRINTS PR00819 CbxX/CfqX superfamily signature 39 53 3.0E-74 T 01-11-2018 IPR000641 CbxX/CfqX GO:0005524 CDA09_11575 57a2c4de2d00dcd0bc18aff874ff676e 318 PRINTS PR00819 CbxX/CfqX superfamily signature 200 219 3.0E-74 T 01-11-2018 IPR000641 CbxX/CfqX GO:0005524 CDA09_11575 57a2c4de2d00dcd0bc18aff874ff676e 318 PRINTS PR00819 CbxX/CfqX superfamily signature 131 150 3.0E-74 T 01-11-2018 IPR000641 CbxX/CfqX GO:0005524 CDA09_11575 57a2c4de2d00dcd0bc18aff874ff676e 318 PRINTS PR00819 CbxX/CfqX superfamily signature 117 131 3.0E-74 T 01-11-2018 IPR000641 CbxX/CfqX GO:0005524 CDA09_11575 57a2c4de2d00dcd0bc18aff874ff676e 318 PRINTS PR00819 CbxX/CfqX superfamily signature 257 269 3.0E-74 T 01-11-2018 IPR000641 CbxX/CfqX GO:0005524 CDA09_11575 57a2c4de2d00dcd0bc18aff874ff676e 318 PRINTS PR00819 CbxX/CfqX superfamily signature 79 94 3.0E-74 T 01-11-2018 IPR000641 CbxX/CfqX GO:0005524 CDA09_11575 57a2c4de2d00dcd0bc18aff874ff676e 318 PRINTS PR00819 CbxX/CfqX superfamily signature 162 174 3.0E-74 T 01-11-2018 IPR000641 CbxX/CfqX GO:0005524 CDA09_11575 57a2c4de2d00dcd0bc18aff874ff676e 318 PRINTS PR00819 CbxX/CfqX superfamily signature 183 200 3.0E-74 T 01-11-2018 IPR000641 CbxX/CfqX GO:0005524 CDA09_11575 57a2c4de2d00dcd0bc18aff874ff676e 318 PRINTS PR00820 CbxX/CfqX protein signature 52 66 2.1E-48 T 01-11-2018 IPR000470 CbxX/CfqX, monofunctional GO:0005524 CDA09_11575 57a2c4de2d00dcd0bc18aff874ff676e 318 PRINTS PR00820 CbxX/CfqX protein signature 288 302 2.1E-48 T 01-11-2018 IPR000470 CbxX/CfqX, monofunctional GO:0005524 CDA09_11575 57a2c4de2d00dcd0bc18aff874ff676e 318 PRINTS PR00820 CbxX/CfqX protein signature 34 48 2.1E-48 T 01-11-2018 IPR000470 CbxX/CfqX, monofunctional GO:0005524 CDA09_11575 57a2c4de2d00dcd0bc18aff874ff676e 318 PRINTS PR00820 CbxX/CfqX protein signature 264 275 2.1E-48 T 01-11-2018 IPR000470 CbxX/CfqX, monofunctional GO:0005524 CDA09_11575 57a2c4de2d00dcd0bc18aff874ff676e 318 PRINTS PR00820 CbxX/CfqX protein signature 249 260 2.1E-48 T 01-11-2018 IPR000470 CbxX/CfqX, monofunctional GO:0005524 CDA09_11575 57a2c4de2d00dcd0bc18aff874ff676e 318 PRINTS PR00820 CbxX/CfqX protein signature 150 163 2.1E-48 T 01-11-2018 IPR000470 CbxX/CfqX, monofunctional GO:0005524 CDA09_11575 57a2c4de2d00dcd0bc18aff874ff676e 318 PRINTS PR00820 CbxX/CfqX protein signature 93 108 2.1E-48 T 01-11-2018 IPR000470 CbxX/CfqX, monofunctional GO:0005524 CDA09_06955 a18f1c5c4a2c5613c457dd1b82259766 383 Pfam PF02222 ATP-grasp domain 114 279 1.7E-45 T 01-11-2018 IPR003135 ATP-grasp fold, ATP-dependent carboxylate-amine ligase-type CDA09_06955 a18f1c5c4a2c5613c457dd1b82259766 383 Gene3D G3DSA:3.30.470.20 181 378 2.8E-73 T 01-11-2018 CDA09_06955 a18f1c5c4a2c5613c457dd1b82259766 383 SUPERFAMILY SSF52440 7 101 2.73E-27 T 01-11-2018 IPR016185 Pre-ATP-grasp domain superfamily CDA09_06955 a18f1c5c4a2c5613c457dd1b82259766 383 SUPERFAMILY SSF51246 303 374 3.37E-15 T 01-11-2018 IPR011054 Rudiment single hybrid motif Reactome: R-HSA-196780 CDA09_06955 a18f1c5c4a2c5613c457dd1b82259766 383 Gene3D G3DSA:3.30.1490.20 114 179 6.2E-18 T 01-11-2018 IPR013815 ATP-grasp fold, subdomain 1 GO:0005524 CDA09_06955 a18f1c5c4a2c5613c457dd1b82259766 383 Gene3D G3DSA:3.40.50.20 1 112 8.7E-40 T 01-11-2018 CDA09_06955 a18f1c5c4a2c5613c457dd1b82259766 383 Hamap MF_01928 N5-carboxyaminoimidazole ribonucleotide synthase [purK]. 7 362 39.481 T 01-11-2018 IPR005875 Phosphoribosylaminoimidazole carboxylase, ATPase subunit GO:0004638|GO:0006189 CDA09_06955 a18f1c5c4a2c5613c457dd1b82259766 383 TIGRFAM TIGR01161 purK: phosphoribosylaminoimidazole carboxylase, ATPase subunit 7 365 1.2E-115 T 01-11-2018 IPR005875 Phosphoribosylaminoimidazole carboxylase, ATPase subunit GO:0004638|GO:0006189 CDA09_06955 a18f1c5c4a2c5613c457dd1b82259766 383 SUPERFAMILY SSF56059 103 299 2.6E-56 T 01-11-2018 CDA09_21945 984cb5a85c179d112b08d27ede9706cb 1049 SUPERFAMILY SSF52172 451 579 1.71E-32 T 01-11-2018 IPR011006 CheY-like superfamily CDA09_21945 984cb5a85c179d112b08d27ede9706cb 1049 Pfam PF00563 EAL domain 794 1027 1.5E-69 T 01-11-2018 IPR001633 EAL domain CDA09_21945 984cb5a85c179d112b08d27ede9706cb 1049 SUPERFAMILY SSF55073 624 775 6.98E-34 T 01-11-2018 IPR029787 Nucleotide cyclase CDA09_21945 984cb5a85c179d112b08d27ede9706cb 1049 PRINTS PR00344 Bacterial sensor protein C-terminal signature 330 344 1.2E-14 T 01-11-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 CDA09_21945 984cb5a85c179d112b08d27ede9706cb 1049 PRINTS PR00344 Bacterial sensor protein C-terminal signature 348 358 1.2E-14 T 01-11-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 CDA09_21945 984cb5a85c179d112b08d27ede9706cb 1049 PRINTS PR00344 Bacterial sensor protein C-terminal signature 389 402 1.2E-14 T 01-11-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 CDA09_21945 984cb5a85c179d112b08d27ede9706cb 1049 PRINTS PR00344 Bacterial sensor protein C-terminal signature 365 383 1.2E-14 T 01-11-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 CDA09_21945 984cb5a85c179d112b08d27ede9706cb 1049 SMART SM00448 450 562 6.8E-30 T 01-11-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 CDA09_21945 984cb5a85c179d112b08d27ede9706cb 1049 SUPERFAMILY SSF47384 166 248 4.71E-18 T 01-11-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 CDA09_21945 984cb5a85c179d112b08d27ede9706cb 1049 Pfam PF08448 PAS fold 46 154 2.2E-11 T 01-11-2018 IPR013656 PAS fold-4 CDA09_21945 984cb5a85c179d112b08d27ede9706cb 1049 SUPERFAMILY SSF55785 33 151 1.92E-12 T 01-11-2018 IPR035965 PAS domain superfamily CDA09_21945 984cb5a85c179d112b08d27ede9706cb 1049 SUPERFAMILY SSF141868 793 1039 1.44E-81 T 01-11-2018 IPR035919 EAL domain superfamily CDA09_21945 984cb5a85c179d112b08d27ede9706cb 1049 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 39 160 3.8E-8 T 01-11-2018 IPR000014 PAS domain CDA09_21945 984cb5a85c179d112b08d27ede9706cb 1049 SMART SM00091 34 100 1.7E-4 T 01-11-2018 IPR000014 PAS domain CDA09_21945 984cb5a85c179d112b08d27ede9706cb 1049 Gene3D G3DSA:3.30.565.10 254 407 2.4E-36 T 01-11-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily CDA09_21945 984cb5a85c179d112b08d27ede9706cb 1049 SMART SM00052 787 1032 7.4E-103 T 01-11-2018 IPR001633 EAL domain CDA09_21945 984cb5a85c179d112b08d27ede9706cb 1049 Pfam PF00512 His Kinase A (phospho-acceptor) domain 181 247 2.9E-16 T 01-11-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 CDA09_21945 984cb5a85c179d112b08d27ede9706cb 1049 Pfam PF00072 Response regulator receiver domain 452 563 9.6E-23 T 01-11-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 CDA09_21945 984cb5a85c179d112b08d27ede9706cb 1049 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 293 403 2.0E-22 T 01-11-2018 IPR003594 Histidine kinase/HSP90-like ATPase CDA09_21945 984cb5a85c179d112b08d27ede9706cb 1049 Gene3D G3DSA:1.10.287.130 168 249 3.7E-19 T 01-11-2018 CDA09_21945 984cb5a85c179d112b08d27ede9706cb 1049 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 616 776 3.5E-23 T 01-11-2018 IPR000160 GGDEF domain CDA09_21945 984cb5a85c179d112b08d27ede9706cb 1049 SMART SM00267 607 778 8.8E-35 T 01-11-2018 IPR000160 GGDEF domain CDA09_21945 984cb5a85c179d112b08d27ede9706cb 1049 SMART SM00388 180 247 4.6E-18 T 01-11-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 CDA09_21945 984cb5a85c179d112b08d27ede9706cb 1049 Gene3D G3DSA:3.20.20.450 788 1041 5.0E-89 T 01-11-2018 IPR035919 EAL domain superfamily CDA09_21945 984cb5a85c179d112b08d27ede9706cb 1049 Gene3D G3DSA:3.40.50.2300 436 582 6.8E-32 T 01-11-2018 CDA09_21945 984cb5a85c179d112b08d27ede9706cb 1049 Pfam PF00990 Diguanylate cyclase, GGDEF domain 618 773 1.9E-31 T 01-11-2018 IPR000160 GGDEF domain CDA09_21945 984cb5a85c179d112b08d27ede9706cb 1049 SMART SM00387 292 405 1.4E-34 T 01-11-2018 IPR003594 Histidine kinase/HSP90-like ATPase CDA09_21945 984cb5a85c179d112b08d27ede9706cb 1049 SUPERFAMILY SSF55874 236 403 2.36E-41 T 01-11-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily CDA09_21945 984cb5a85c179d112b08d27ede9706cb 1049 Gene3D G3DSA:3.30.70.270 611 782 1.8E-42 T 01-11-2018 CDA09_21945 984cb5a85c179d112b08d27ede9706cb 1049 Gene3D G3DSA:3.30.450.20 41 167 1.6E-26 T 01-11-2018 CDA09_10660 70d8a38a3eb73458f9f9b4e6a0e067b7 63 Pfam PF13490 Putative zinc-finger 4 38 1.0E-6 T 01-11-2018 IPR027383 Putative zinc-finger CDA09_03930 35a366c084885586cc2d90321b122b9a 356 SMART SM00388 136 201 1.7E-16 T 01-11-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 CDA09_03930 35a366c084885586cc2d90321b122b9a 356 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 240 351 5.0E-18 T 01-11-2018 IPR003594 Histidine kinase/HSP90-like ATPase CDA09_03930 35a366c084885586cc2d90321b122b9a 356 SMART SM00387 239 354 2.2E-31 T 01-11-2018 IPR003594 Histidine kinase/HSP90-like ATPase CDA09_03930 35a366c084885586cc2d90321b122b9a 356 Gene3D G3DSA:1.10.287.130 139 196 1.3E-14 T 01-11-2018 CDA09_03930 35a366c084885586cc2d90321b122b9a 356 Pfam PF08448 PAS fold 17 110 3.2E-7 T 01-11-2018 IPR013656 PAS fold-4 CDA09_03930 35a366c084885586cc2d90321b122b9a 356 Gene3D G3DSA:3.30.565.10 199 352 2.1E-39 T 01-11-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily CDA09_03930 35a366c084885586cc2d90321b122b9a 356 SUPERFAMILY SSF55874 204 351 6.55E-35 T 01-11-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily CDA09_03930 35a366c084885586cc2d90321b122b9a 356 PRINTS PR00344 Bacterial sensor protein C-terminal signature 315 333 7.1E-11 T 01-11-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 CDA09_03930 35a366c084885586cc2d90321b122b9a 356 PRINTS PR00344 Bacterial sensor protein C-terminal signature 338 351 7.1E-11 T 01-11-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 CDA09_03930 35a366c084885586cc2d90321b122b9a 356 PRINTS PR00344 Bacterial sensor protein C-terminal signature 286 300 7.1E-11 T 01-11-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 CDA09_03930 35a366c084885586cc2d90321b122b9a 356 SUPERFAMILY SSF55785 17 105 2.39E-7 T 01-11-2018 IPR035965 PAS domain superfamily CDA09_03930 35a366c084885586cc2d90321b122b9a 356 Gene3D G3DSA:3.30.450.20 15 119 1.9E-16 T 01-11-2018 CDA09_03930 35a366c084885586cc2d90321b122b9a 356 Pfam PF00512 His Kinase A (phospho-acceptor) domain 137 194 1.1E-15 T 01-11-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 CDA09_03930 35a366c084885586cc2d90321b122b9a 356 SUPERFAMILY SSF47384 126 194 4.12E-15 T 01-11-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 CDA09_22655 e7ac4e28e18b1b47fc0fef69a7d1693f 436 Pfam PF06050 2-hydroxyglutaryl-CoA dehydratase, D-component 68 429 3.2E-41 T 01-11-2018 IPR010327 FldB/FldC dehydratase alpha/beta subunit CDA09_22655 e7ac4e28e18b1b47fc0fef69a7d1693f 436 TIGRFAM TIGR03191 benz_CoA_bzdO: benzoyl-CoA reductase, bzd-type, O subunit 7 436 6.3E-291 T 01-11-2018 IPR017604 Benzoyl-CoA reductase, bzd-type, O subunit CDA09_22655 e7ac4e28e18b1b47fc0fef69a7d1693f 436 Gene3D G3DSA:3.40.50.11890 108 183 9.9E-8 T 01-11-2018 CDA09_22655 e7ac4e28e18b1b47fc0fef69a7d1693f 436 Gene3D G3DSA:1.20.1270.370 184 226 9.9E-8 T 01-11-2018 CDA09_22655 e7ac4e28e18b1b47fc0fef69a7d1693f 436 Gene3D G3DSA:3.40.50.11900 310 434 3.5E-7 T 01-11-2018 CDA09_17625 3b46d1406287fb310475d04d13bedae5 1257 Pfam PF14331 ImcF-related N-terminal domain 183 436 9.1E-81 T 01-11-2018 IPR025743 ImcF-related, N-terminal domain CDA09_17625 3b46d1406287fb310475d04d13bedae5 1257 Pfam PF06744 Type VI secretion protein IcmF C-terminal 970 1170 7.4E-48 T 01-11-2018 IPR010623 Type VI secretion system IcmF, C-terminal CDA09_17625 3b46d1406287fb310475d04d13bedae5 1257 TIGRFAM TIGR03348 VI_IcmF: type VI secretion protein IcmF 34 1200 9.9E-203 T 01-11-2018 IPR017731 Type VI secretion system, IcmF CDA09_17625 3b46d1406287fb310475d04d13bedae5 1257 Pfam PF06761 Intracellular multiplication and human macrophage-killing 486 829 3.3E-78 T 01-11-2018 IPR009612 ImcF-related CDA09_16265 d62b36e959524a343ea2444dd000df38 453 SUPERFAMILY SSF55957 361 448 8.89E-22 T 01-11-2018 IPR036900 Alpha-D-phosphohexomutase, C-terminal domain superfamily GO:0016868|GO:0071704 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 CDA09_16265 d62b36e959524a343ea2444dd000df38 453 Pfam PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I 3 140 3.5E-40 T 01-11-2018 IPR005844 Alpha-D-phosphohexomutase, alpha/beta/alpha domain I GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 CDA09_16265 d62b36e959524a343ea2444dd000df38 453 Pfam PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III 263 370 8.8E-32 T 01-11-2018 IPR005846 Alpha-D-phosphohexomutase, alpha/beta/alpha domain III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 CDA09_16265 d62b36e959524a343ea2444dd000df38 453 Pfam PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain 377 445 2.5E-17 T 01-11-2018 IPR005843 Alpha-D-phosphohexomutase, C-terminal GO:0016868|GO:0071704 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 CDA09_16265 d62b36e959524a343ea2444dd000df38 453 ProSitePatterns PS00710 Phosphoglucomutase and phosphomannomutase phosphoserine signature. 101 110 - T 01-11-2018 IPR016066 Alpha-D-phosphohexomutase, conserved site GO:0000287 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 CDA09_16265 d62b36e959524a343ea2444dd000df38 453 Gene3D G3DSA:3.40.120.10 180 365 1.5E-63 T 01-11-2018 CDA09_16265 d62b36e959524a343ea2444dd000df38 453 SUPERFAMILY SSF53738 2 186 2.55E-47 T 01-11-2018 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 CDA09_16265 d62b36e959524a343ea2444dd000df38 453 Gene3D G3DSA:3.40.120.10 2 159 5.5E-47 T 01-11-2018 CDA09_16265 d62b36e959524a343ea2444dd000df38 453 TIGRFAM TIGR01455 glmM: phosphoglucosamine mutase 6 446 3.4E-184 T 01-11-2018 IPR006352 Phosphoglucosamine mutase, bacterial type GO:0000287|GO:0005975|GO:0008966 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 CDA09_16265 d62b36e959524a343ea2444dd000df38 453 Pfam PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II 162 259 9.9E-18 T 01-11-2018 IPR005845 Alpha-D-phosphohexomutase, alpha/beta/alpha domain II GO:0005975 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 CDA09_16265 d62b36e959524a343ea2444dd000df38 453 SUPERFAMILY SSF53738 161 261 1.41E-29 T 01-11-2018 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 CDA09_16265 d62b36e959524a343ea2444dd000df38 453 Hamap MF_01554_B Phosphoglucosamine mutase [glmM]. 2 448 47.499 T 01-11-2018 IPR006352 Phosphoglucosamine mutase, bacterial type GO:0000287|GO:0005975|GO:0008966 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 CDA09_16265 d62b36e959524a343ea2444dd000df38 453 Gene3D G3DSA:3.30.310.50 374 449 5.3E-23 T 01-11-2018 CDA09_16265 d62b36e959524a343ea2444dd000df38 453 SUPERFAMILY SSF53738 263 370 9.81E-31 T 01-11-2018 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 CDA09_16265 d62b36e959524a343ea2444dd000df38 453 PRINTS PR00509 Phosphoglucomutase/phosphomannomutase family signature 100 114 2.1E-13 T 01-11-2018 IPR005841 Alpha-D-phosphohexomutase superfamily GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 CDA09_16265 d62b36e959524a343ea2444dd000df38 453 PRINTS PR00509 Phosphoglucomutase/phosphomannomutase family signature 179 198 2.1E-13 T 01-11-2018 IPR005841 Alpha-D-phosphohexomutase superfamily GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 CDA09_16265 d62b36e959524a343ea2444dd000df38 453 PRINTS PR00509 Phosphoglucomutase/phosphomannomutase family signature 239 254 2.1E-13 T 01-11-2018 IPR005841 Alpha-D-phosphohexomutase superfamily GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 CDA09_16265 d62b36e959524a343ea2444dd000df38 453 Gene3D G3DSA:3.40.120.10 262 343 1.5E-63 T 01-11-2018 CDA09_05185 f21bab231d4ee9f7eeaf158114529c05 495 TIGRFAM TIGR03708 poly_P_AMP_trns: polyphosphate:AMP phosphotransferase 2 493 3.3E-227 T 01-11-2018 IPR022489 Polyphosphate:AMP phosphotransferase GO:0006797|GO:0043751 CDA09_05185 f21bab231d4ee9f7eeaf158114529c05 495 Gene3D G3DSA:3.40.50.300 1 237 3.9E-81 T 01-11-2018 CDA09_05185 f21bab231d4ee9f7eeaf158114529c05 495 Gene3D G3DSA:3.40.50.300 240 495 1.1E-103 T 01-11-2018 CDA09_05185 f21bab231d4ee9f7eeaf158114529c05 495 Pfam PF03976 Polyphosphate kinase 2 (PPK2) 270 492 1.0E-87 T 01-11-2018 IPR022488 Polyphosphate kinase-2-related CDA09_05185 f21bab231d4ee9f7eeaf158114529c05 495 Pfam PF03976 Polyphosphate kinase 2 (PPK2) 11 233 4.2E-54 T 01-11-2018 IPR022488 Polyphosphate kinase-2-related CDA09_05185 f21bab231d4ee9f7eeaf158114529c05 495 SUPERFAMILY SSF52540 301 487 3.3E-25 T 01-11-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CDA09_05185 f21bab231d4ee9f7eeaf158114529c05 495 SUPERFAMILY SSF52540 43 235 1.78E-17 T 01-11-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CDA09_20710 bfc56d3a21db11b27319517aa597b613 327 SUPERFAMILY SSF52172 146 275 4.13E-18 T 01-11-2018 IPR011006 CheY-like superfamily CDA09_20710 bfc56d3a21db11b27319517aa597b613 327 SUPERFAMILY SSF52172 7 128 1.34E-32 T 01-11-2018 IPR011006 CheY-like superfamily CDA09_20710 bfc56d3a21db11b27319517aa597b613 327 Gene3D G3DSA:3.40.50.2300 142 275 1.5E-16 T 01-11-2018 CDA09_20710 bfc56d3a21db11b27319517aa597b613 327 SMART SM00448 147 258 0.0026 T 01-11-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 CDA09_20710 bfc56d3a21db11b27319517aa597b613 327 SMART SM00448 6 117 2.6E-28 T 01-11-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 CDA09_20710 bfc56d3a21db11b27319517aa597b613 327 Gene3D G3DSA:3.40.50.2300 6 138 2.0E-32 T 01-11-2018 CDA09_20710 bfc56d3a21db11b27319517aa597b613 327 Pfam PF00072 Response regulator receiver domain 149 254 1.3E-10 T 01-11-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 CDA09_20710 bfc56d3a21db11b27319517aa597b613 327 Pfam PF00072 Response regulator receiver domain 8 117 1.7E-24 T 01-11-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 CDA09_19705 7379b20802e5f5e0f31e9c56819f0889 263 Gene3D G3DSA:3.40.50.300 11 249 6.6E-62 T 01-11-2018 CDA09_19705 7379b20802e5f5e0f31e9c56819f0889 263 ProSitePatterns PS00211 ABC transporters family signature. 140 154 - T 01-11-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 CDA09_19705 7379b20802e5f5e0f31e9c56819f0889 263 SUPERFAMILY SSF52540 29 247 3.92E-72 T 01-11-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CDA09_19705 7379b20802e5f5e0f31e9c56819f0889 263 Pfam PF00005 ABC transporter 30 167 2.5E-32 T 01-11-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 CDA09_19705 7379b20802e5f5e0f31e9c56819f0889 263 SMART SM00382 39 218 8.0E-16 T 01-11-2018 IPR003593 AAA+ ATPase domain CDA09_01635 c690787162f87d39c809a75d85bcae9e 373 Gene3D G3DSA:2.30.30.40 33 159 9.2E-24 T 01-11-2018 CDA09_01635 c690787162f87d39c809a75d85bcae9e 373 SMART SM00260 28 165 1.5E-8 T 01-11-2018 IPR002545 CheW-like domain GO:0006935|GO:0007165 CDA09_01635 c690787162f87d39c809a75d85bcae9e 373 SMART SM00260 213 344 1.0E-14 T 01-11-2018 IPR002545 CheW-like domain GO:0006935|GO:0007165 CDA09_01635 c690787162f87d39c809a75d85bcae9e 373 Gene3D G3DSA:2.30.30.40 221 338 5.4E-21 T 01-11-2018 CDA09_01635 c690787162f87d39c809a75d85bcae9e 373 Pfam PF01584 CheW-like domain 218 346 3.6E-21 T 01-11-2018 IPR002545 CheW-like domain GO:0006935|GO:0007165 CDA09_01635 c690787162f87d39c809a75d85bcae9e 373 Pfam PF01584 CheW-like domain 32 167 1.3E-21 T 01-11-2018 IPR002545 CheW-like domain GO:0006935|GO:0007165 CDA09_01635 c690787162f87d39c809a75d85bcae9e 373 SUPERFAMILY SSF50341 32 168 4.84E-24 T 01-11-2018 IPR036061 CheW-like domain superfamily GO:0006935|GO:0007165 CDA09_01635 c690787162f87d39c809a75d85bcae9e 373 Gene3D G3DSA:2.40.50.180 236 339 5.4E-21 T 01-11-2018 CDA09_01635 c690787162f87d39c809a75d85bcae9e 373 Gene3D G3DSA:2.40.50.180 49 160 9.2E-24 T 01-11-2018 CDA09_01635 c690787162f87d39c809a75d85bcae9e 373 SUPERFAMILY SSF50341 216 347 1.83E-25 T 01-11-2018 IPR036061 CheW-like domain superfamily GO:0006935|GO:0007165 CDA09_16615 e4f779f10e95071ebcbfa559a628a927 404 Gene3D G3DSA:1.10.530.10 69 317 6.0E-81 T 01-11-2018 CDA09_16615 e4f779f10e95071ebcbfa559a628a927 404 Gene3D G3DSA:1.10.101.10 330 397 1.6E-9 T 01-11-2018 IPR036366 PGBD superfamily Reactome: R-HSA-1442490|Reactome: R-HSA-1474228 CDA09_16615 e4f779f10e95071ebcbfa559a628a927 404 TIGRFAM TIGR02283 MltB_2: lytic murein transglycosylase 26 321 1.5E-111 T 01-11-2018 IPR011970 Lytic murein transglycosylase CDA09_16615 e4f779f10e95071ebcbfa559a628a927 404 SUPERFAMILY SSF53955 13 323 5.81E-98 T 01-11-2018 IPR023346 Lysozyme-like domain superfamily CDA09_16615 e4f779f10e95071ebcbfa559a628a927 404 Pfam PF13406 Transglycosylase SLT domain 26 318 1.8E-104 T 01-11-2018 IPR031304 Transglycosylase SLT domain 2 CDA09_16615 e4f779f10e95071ebcbfa559a628a927 404 Gene3D G3DSA:1.10.8.350 38 202 6.0E-81 T 01-11-2018 CDA09_16615 e4f779f10e95071ebcbfa559a628a927 404 SUPERFAMILY SSF47090 326 397 7.26E-16 T 01-11-2018 IPR036365 PGBD-like superfamily CDA09_16615 e4f779f10e95071ebcbfa559a628a927 404 Pfam PF01471 Putative peptidoglycan binding domain 339 390 1.7E-10 T 01-11-2018 IPR002477 Peptidoglycan binding-like CDA09_11560 a88b7fe0876bc9526e7d427c2fdaf2d5 306 SUPERFAMILY SSF53850 94 300 5.51E-43 T 01-11-2018 CDA09_11560 a88b7fe0876bc9526e7d427c2fdaf2d5 306 SUPERFAMILY SSF46785 6 105 2.87E-19 T 01-11-2018 IPR036390 Winged helix DNA-binding domain superfamily CDA09_11560 a88b7fe0876bc9526e7d427c2fdaf2d5 306 Gene3D G3DSA:3.40.190.10 96 285 7.4E-39 T 01-11-2018 CDA09_11560 a88b7fe0876bc9526e7d427c2fdaf2d5 306 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 9 67 4.6E-20 T 01-11-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 CDA09_11560 a88b7fe0876bc9526e7d427c2fdaf2d5 306 Pfam PF03466 LysR substrate binding domain 94 296 1.3E-46 T 01-11-2018 IPR005119 LysR, substrate-binding CDA09_11560 a88b7fe0876bc9526e7d427c2fdaf2d5 306 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 35 45 4.4E-5 T 01-11-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 CDA09_11560 a88b7fe0876bc9526e7d427c2fdaf2d5 306 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 24 35 4.4E-5 T 01-11-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 CDA09_11560 a88b7fe0876bc9526e7d427c2fdaf2d5 306 Gene3D G3DSA:1.10.10.10 3 86 6.2E-23 T 01-11-2018 IPR036388 Winged helix-like DNA-binding domain superfamily CDA09_11560 a88b7fe0876bc9526e7d427c2fdaf2d5 306 Gene3D G3DSA:3.40.190.10 168 271 7.4E-39 T 01-11-2018 CDA09_02520 1819875b24dd96b1e7a04ac53594852e 543 Gene3D G3DSA:3.30.420.40 15 322 7.2E-68 T 01-11-2018 CDA09_02520 1819875b24dd96b1e7a04ac53594852e 543 SUPERFAMILY SSF53067 22 323 2.33E-9 T 01-11-2018 CDA09_02520 1819875b24dd96b1e7a04ac53594852e 543 Gene3D G3DSA:3.30.420.350 104 315 7.2E-68 T 01-11-2018 CDA09_02520 1819875b24dd96b1e7a04ac53594852e 543 Pfam PF02543 Carbamoyltransferase N-terminus 5 70 7.4E-6 T 01-11-2018 IPR003696 Carbamoyltransferase GO:0003824|GO:0009058 CDA09_02520 1819875b24dd96b1e7a04ac53594852e 543 Pfam PF02543 Carbamoyltransferase N-terminus 97 321 1.5E-34 T 01-11-2018 IPR003696 Carbamoyltransferase GO:0003824|GO:0009058 CDA09_02520 1819875b24dd96b1e7a04ac53594852e 543 Gene3D G3DSA:3.90.870.20 335 541 3.4E-73 T 01-11-2018 IPR038152 Carbamoyltransferase, C-terminal domain superfamily CDA09_02520 1819875b24dd96b1e7a04ac53594852e 543 Pfam PF16861 Carbamoyltransferase C-terminus 373 542 8.4E-64 T 01-11-2018 IPR031730 Carbamoyltransferase, C-terminal CDA09_14140 31492415bc3b1fc941f9873ff3a850f6 301 Gene3D G3DSA:3.20.20.450 39 288 2.2E-100 T 01-11-2018 IPR035919 EAL domain superfamily CDA09_14140 31492415bc3b1fc941f9873ff3a850f6 301 Pfam PF00563 EAL domain 44 276 9.4E-79 T 01-11-2018 IPR001633 EAL domain CDA09_14140 31492415bc3b1fc941f9873ff3a850f6 301 SMART SM00052 38 282 1.9E-113 T 01-11-2018 IPR001633 EAL domain CDA09_14140 31492415bc3b1fc941f9873ff3a850f6 301 SUPERFAMILY SSF141868 44 287 3.66E-89 T 01-11-2018 IPR035919 EAL domain superfamily CDA09_13075 dc026e14518a4fbaa13d22047a57533e 521 SUPERFAMILY SSF52317 3 233 4.22E-56 T 01-11-2018 IPR029062 Class I glutamine amidotransferase-like CDA09_13075 dc026e14518a4fbaa13d22047a57533e 521 SUPERFAMILY SSF54810 401 521 7.72E-51 T 01-11-2018 CDA09_13075 dc026e14518a4fbaa13d22047a57533e 521 Pfam PF00958 GMP synthase C terminal domain 429 520 3.6E-44 T 01-11-2018 IPR001674 GMP synthase, C-terminal GO:0003922|GO:0005524|GO:0006164|GO:0006177 KEGG: 00230+6.3.5.2|KEGG: 00983+6.3.5.2|MetaCyc: PWY-7221|Reactome: R-HSA-73817 CDA09_13075 dc026e14518a4fbaa13d22047a57533e 521 Pfam PF02540 NAD synthase 212 289 5.4E-8 T 01-11-2018 IPR022310 NAD/GMP synthase CDA09_13075 dc026e14518a4fbaa13d22047a57533e 521 Pfam PF00117 Glutamine amidotransferase class-I 8 196 3.0E-38 T 01-11-2018 IPR017926 Glutamine amidotransferase CDA09_13075 dc026e14518a4fbaa13d22047a57533e 521 SUPERFAMILY SSF52402 193 415 3.31E-61 T 01-11-2018 CDA09_13075 dc026e14518a4fbaa13d22047a57533e 521 TIGRFAM TIGR00888 guaA_Nterm: GMP synthase (glutamine-hydrolyzing), N-terminal domain 6 200 6.5E-75 T 01-11-2018 IPR004739 GMP synthase, glutamine amidotransferase GO:0003922|GO:0005524|GO:0006177 KEGG: 00230+6.3.5.2|KEGG: 00983+6.3.5.2|MetaCyc: PWY-7221|Reactome: R-HSA-73817 CDA09_13075 dc026e14518a4fbaa13d22047a57533e 521 PRINTS PR00096 Glutamine amidotransferase superfamily signature 173 186 7.1E-7 T 01-11-2018 CDA09_13075 dc026e14518a4fbaa13d22047a57533e 521 PRINTS PR00096 Glutamine amidotransferase superfamily signature 50 59 7.1E-7 T 01-11-2018 CDA09_13075 dc026e14518a4fbaa13d22047a57533e 521 PRINTS PR00096 Glutamine amidotransferase superfamily signature 77 88 7.1E-7 T 01-11-2018 CDA09_13075 dc026e14518a4fbaa13d22047a57533e 521 TIGRFAM TIGR00884 guaA_Cterm: GMP synthase (glutamine-hydrolyzing), C-terminal domain 209 521 5.9E-152 T 01-11-2018 IPR001674 GMP synthase, C-terminal GO:0003922|GO:0005524|GO:0006164|GO:0006177 KEGG: 00230+6.3.5.2|KEGG: 00983+6.3.5.2|MetaCyc: PWY-7221|Reactome: R-HSA-73817 CDA09_13075 dc026e14518a4fbaa13d22047a57533e 521 Gene3D G3DSA:3.30.300.10 402 521 3.0E-52 T 01-11-2018 CDA09_13075 dc026e14518a4fbaa13d22047a57533e 521 Gene3D G3DSA:3.40.50.880 5 202 3.2E-55 T 01-11-2018 IPR029062 Class I glutamine amidotransferase-like CDA09_13075 dc026e14518a4fbaa13d22047a57533e 521 Hamap MF_00344 GMP synthase [glutamine-hydrolyzing] [guaA]. 3 521 56.445 T 01-11-2018 IPR022955 GMP synthase GO:0003922|GO:0006177 KEGG: 00230+6.3.5.2|KEGG: 00983+6.3.5.2|MetaCyc: PWY-7221 CDA09_13075 dc026e14518a4fbaa13d22047a57533e 521 PRINTS PR00097 Anthranilate synthase component II signature 173 186 2.7E-5 T 01-11-2018 CDA09_13075 dc026e14518a4fbaa13d22047a57533e 521 PRINTS PR00097 Anthranilate synthase component II signature 50 59 2.7E-5 T 01-11-2018 CDA09_13075 dc026e14518a4fbaa13d22047a57533e 521 PRINTS PR00097 Anthranilate synthase component II signature 77 88 2.7E-5 T 01-11-2018 CDA09_13075 dc026e14518a4fbaa13d22047a57533e 521 Gene3D G3DSA:3.40.50.620 205 401 2.6E-77 T 01-11-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold CDA09_08610 035c71f69141c04cd02280978ff618f8 496 TIGRFAM TIGR00800 ncs1: NCS1 nucleoside transporter family 13 442 4.9E-116 T 01-11-2018 IPR012681 Nucleobase cation symporter-1, NCS1 GO:0016020|GO:0022857|GO:0055085 CDA09_08610 035c71f69141c04cd02280978ff618f8 496 Gene3D G3DSA:1.10.4160.10 2 476 2.3E-131 T 01-11-2018 IPR038271 Purine-cytosine permease superfamily CDA09_08610 035c71f69141c04cd02280978ff618f8 496 Pfam PF02133 Permease for cytosine/purines, uracil, thiamine, allantoin 22 468 5.0E-122 T 01-11-2018 IPR001248 Purine-cytosine permease GO:0016020|GO:0022857|GO:0055085 CDA09_02310 e788ea9279d7739c4b0d4c1e06b8443b 151 PIRSF PIRSF027391 1 150 1.3E-27 T 01-11-2018 IPR014535 Predicted heptaprenyl diphosphate synthase, component I CDA09_02310 e788ea9279d7739c4b0d4c1e06b8443b 151 Gene3D G3DSA:1.10.1760.20 1 144 5.3E-8 T 01-11-2018 CDA09_02310 e788ea9279d7739c4b0d4c1e06b8443b 151 Pfam PF07456 Heptaprenyl diphosphate synthase component I 1 142 1.8E-43 T 01-11-2018 IPR010898 Heptaprenyl diphosphate synthase component I CDA09_16505 438c05d0f64e21af19111e29001fb5e0 107 SUPERFAMILY SSF54862 1 102 3.94E-25 T 01-11-2018 CDA09_16505 438c05d0f64e21af19111e29001fb5e0 107 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 40 51 - T 01-11-2018 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site CDA09_16505 438c05d0f64e21af19111e29001fb5e0 107 Pfam PF00037 4Fe-4S binding domain 34 56 8.1E-7 T 01-11-2018 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain CDA09_16505 438c05d0f64e21af19111e29001fb5e0 107 Pfam PF11953 Domain of unknown function (DUF3470) 66 107 2.1E-18 T 01-11-2018 IPR022569 Ferredoxin, C-terminal CDA09_16505 438c05d0f64e21af19111e29001fb5e0 107 Gene3D G3DSA:3.30.70.20 2 101 4.9E-31 T 01-11-2018 CDA09_16505 438c05d0f64e21af19111e29001fb5e0 107 PRINTS PR00354 7Fe ferredoxin signature 19 29 1.7E-13 T 01-11-2018 IPR000813 7Fe ferredoxin GO:0009055 CDA09_16505 438c05d0f64e21af19111e29001fb5e0 107 PRINTS PR00354 7Fe ferredoxin signature 9 19 1.7E-13 T 01-11-2018 IPR000813 7Fe ferredoxin GO:0009055 CDA09_16505 438c05d0f64e21af19111e29001fb5e0 107 PRINTS PR00354 7Fe ferredoxin signature 35 52 1.7E-13 T 01-11-2018 IPR000813 7Fe ferredoxin GO:0009055 CDA09_06495 f7a35f5361b2f556bc05224a775c1fb1 211 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 179 191 5.7E-10 T 01-11-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 CDA09_06495 f7a35f5361b2f556bc05224a775c1fb1 211 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 149 163 5.7E-10 T 01-11-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 CDA09_06495 f7a35f5361b2f556bc05224a775c1fb1 211 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 163 179 5.7E-10 T 01-11-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 CDA09_06495 f7a35f5361b2f556bc05224a775c1fb1 211 SUPERFAMILY SSF52172 1 132 1.07E-33 T 01-11-2018 IPR011006 CheY-like superfamily CDA09_06495 f7a35f5361b2f556bc05224a775c1fb1 211 SMART SM00421 146 203 2.8E-19 T 01-11-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 CDA09_06495 f7a35f5361b2f556bc05224a775c1fb1 211 Gene3D G3DSA:3.40.50.12740 2 209 4.1E-61 T 01-11-2018 CDA09_06495 f7a35f5361b2f556bc05224a775c1fb1 211 SMART SM00448 2 115 8.1E-29 T 01-11-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 CDA09_06495 f7a35f5361b2f556bc05224a775c1fb1 211 ProSitePatterns PS00622 LuxR-type HTH domain signature. 163 190 - T 01-11-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 CDA09_06495 f7a35f5361b2f556bc05224a775c1fb1 211 Pfam PF00196 Bacterial regulatory proteins, luxR family 148 203 8.0E-17 T 01-11-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 CDA09_06495 f7a35f5361b2f556bc05224a775c1fb1 211 SUPERFAMILY SSF46894 141 209 1.33E-19 T 01-11-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 CDA09_06495 f7a35f5361b2f556bc05224a775c1fb1 211 Pfam PF00072 Response regulator receiver domain 4 116 4.9E-25 T 01-11-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 CDA09_14525 ca0f52d3e00616f40bc11c9b0f6a6163 259 Gene3D G3DSA:2.160.20.70 142 257 4.6E-28 T 01-11-2018 IPR016098 Cyclase-associated protein CAP/septum formation inhibitor MinC, C-terminal GO:0000902 CDA09_14525 ca0f52d3e00616f40bc11c9b0f6a6163 259 Gene3D G3DSA:3.30.750.120 1 123 5.8E-13 T 01-11-2018 IPR038061 MinC, Proteobacteria, N-terminal domain superfamily CDA09_14525 ca0f52d3e00616f40bc11c9b0f6a6163 259 Pfam PF03775 Septum formation inhibitor MinC, C-terminal domain 149 240 1.7E-26 T 01-11-2018 IPR005526 Septum formation inhibitor MinC, C-terminal GO:0000902 CDA09_14525 ca0f52d3e00616f40bc11c9b0f6a6163 259 Hamap MF_00267 Probable septum site-determining protein MinC [minC]. 9 257 23.383 T 01-11-2018 IPR013033 Septum formation inhibitor MinC GO:0051726|GO:1901891 CDA09_14525 ca0f52d3e00616f40bc11c9b0f6a6163 259 SUPERFAMILY SSF63848 146 244 1.7E-27 T 01-11-2018 IPR036145 Septum formation inhibitor MinC, C-terminal domain superfamily GO:0000902 CDA09_14525 ca0f52d3e00616f40bc11c9b0f6a6163 259 Pfam PF05209 Septum formation inhibitor MinC, N-terminal domain 9 106 8.1E-9 T 01-11-2018 IPR007874 Septum formation inhibitor MinC, N-terminal GO:0051302 CDA09_14525 ca0f52d3e00616f40bc11c9b0f6a6163 259 TIGRFAM TIGR01222 minC: septum site-determining protein MinC 10 244 6.4E-49 T 01-11-2018 IPR013033 Septum formation inhibitor MinC GO:0051726|GO:1901891 CDA09_06595 b89019a4f05886fdef547e42a4b735dc 242 PIRSF PIRSF039085 1 241 2.2E-104 T 01-11-2018 IPR030679 ABC-type amino acid transport system, ATPase component, HisP-type GO:0003333|GO:0015424 CDA09_06595 b89019a4f05886fdef547e42a4b735dc 242 Pfam PF00005 ABC transporter 17 165 5.6E-34 T 01-11-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 CDA09_06595 b89019a4f05886fdef547e42a4b735dc 242 SUPERFAMILY SSF52540 1 235 2.06E-77 T 01-11-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CDA09_06595 b89019a4f05886fdef547e42a4b735dc 242 SMART SM00382 26 213 5.1E-15 T 01-11-2018 IPR003593 AAA+ ATPase domain CDA09_06595 b89019a4f05886fdef547e42a4b735dc 242 ProSitePatterns PS00211 ABC transporters family signature. 137 151 - T 01-11-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 CDA09_06595 b89019a4f05886fdef547e42a4b735dc 242 Gene3D G3DSA:3.40.50.300 1 240 3.5E-77 T 01-11-2018 CDA09_20960 9932f5b5e3b5f967d7a8b00bd4406cb7 215 Gene3D G3DSA:3.40.50.2020 2 211 2.8E-67 T 01-11-2018 CDA09_20960 9932f5b5e3b5f967d7a8b00bd4406cb7 215 TIGRFAM TIGR00336 pyrE: orotate phosphoribosyltransferase 11 185 3.2E-52 T 01-11-2018 IPR004467 Orotate phosphoribosyl transferase domain GO:0004588 KEGG: 00240+2.4.2.10|KEGG: 00983+2.4.2.10|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791|Reactome: R-HSA-500753 CDA09_20960 9932f5b5e3b5f967d7a8b00bd4406cb7 215 Pfam PF00156 Phosphoribosyl transferase domain 43 162 2.8E-12 T 01-11-2018 IPR000836 Phosphoribosyltransferase domain GO:0009116 CDA09_20960 9932f5b5e3b5f967d7a8b00bd4406cb7 215 SUPERFAMILY SSF53271 4 209 1.99E-45 T 01-11-2018 IPR029057 Phosphoribosyltransferase-like CDA09_20960 9932f5b5e3b5f967d7a8b00bd4406cb7 215 Hamap MF_01208 Orotate phosphoribosyltransferase [pyrE]. 1 215 32.259 T 01-11-2018 IPR023031 Orotate phosphoribosyltransferase GO:0004588|GO:0006221 KEGG: 00240+2.4.2.10|KEGG: 00983+2.4.2.10|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791|Reactome: R-HSA-500753 CDA09_03350 57c809e8e5f008f56831decb0e741452 271 SUPERFAMILY SSF53681 10 111 2.94E-32 T 01-11-2018 IPR001920 Asp/Glu racemase GO:0016855 KEGG: 00471+5.1.1.3|MetaCyc: PWY-6386|MetaCyc: PWY-6387 CDA09_03350 57c809e8e5f008f56831decb0e741452 271 Gene3D G3DSA:3.40.50.1860 9 258 3.1E-88 T 01-11-2018 CDA09_03350 57c809e8e5f008f56831decb0e741452 271 Hamap MF_00258 Glutamate racemase [murI]. 9 262 35.917 T 01-11-2018 IPR004391 Glutamate racemase GO:0008881|GO:0009252 KEGG: 00471+5.1.1.3|MetaCyc: PWY-6386|MetaCyc: PWY-6387 CDA09_03350 57c809e8e5f008f56831decb0e741452 271 Pfam PF01177 Asp/Glu/Hydantoin racemase 11 220 2.4E-30 T 01-11-2018 IPR015942 Asp/Glu/hydantoin racemase GO:0006807|GO:0036361 KEGG: 00471+5.1.1.3|MetaCyc: PWY-6386|MetaCyc: PWY-6387 CDA09_03350 57c809e8e5f008f56831decb0e741452 271 ProSitePatterns PS00924 Aspartate and glutamate racemases signature 2. 186 196 - T 01-11-2018 IPR033134 Asp/Glu racemase, active site 2 KEGG: 00471+5.1.1.3|MetaCyc: PWY-6386|MetaCyc: PWY-6387 CDA09_03350 57c809e8e5f008f56831decb0e741452 271 Gene3D G3DSA:3.40.50.1860 101 213 3.1E-88 T 01-11-2018 CDA09_03350 57c809e8e5f008f56831decb0e741452 271 TIGRFAM TIGR00067 glut_race: glutamate racemase 11 258 1.2E-67 T 01-11-2018 IPR004391 Glutamate racemase GO:0008881|GO:0009252 KEGG: 00471+5.1.1.3|MetaCyc: PWY-6386|MetaCyc: PWY-6387 CDA09_03350 57c809e8e5f008f56831decb0e741452 271 SUPERFAMILY SSF53681 117 269 2.4E-39 T 01-11-2018 IPR001920 Asp/Glu racemase GO:0016855 KEGG: 00471+5.1.1.3|MetaCyc: PWY-6386|MetaCyc: PWY-6387 CDA09_10850 712bc23e586f10744b88a3ca211e4e63 472 SMART SM00388 240 304 1.5E-9 T 01-11-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 CDA09_10850 712bc23e586f10744b88a3ca211e4e63 472 Gene3D G3DSA:3.30.565.10 305 458 3.6E-34 T 01-11-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily CDA09_10850 712bc23e586f10744b88a3ca211e4e63 472 Pfam PF08521 Two-component sensor kinase N-terminal 26 162 3.9E-31 T 01-11-2018 IPR013727 Two-component sensor kinase, N-terminal CDA09_10850 712bc23e586f10744b88a3ca211e4e63 472 Gene3D G3DSA:1.10.287.130 191 304 1.0E-12 T 01-11-2018 CDA09_10850 712bc23e586f10744b88a3ca211e4e63 472 SMART SM00387 349 460 2.6E-35 T 01-11-2018 IPR003594 Histidine kinase/HSP90-like ATPase CDA09_10850 712bc23e586f10744b88a3ca211e4e63 472 PRINTS PR00344 Bacterial sensor protein C-terminal signature 405 415 6.1E-13 T 01-11-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 CDA09_10850 712bc23e586f10744b88a3ca211e4e63 472 PRINTS PR00344 Bacterial sensor protein C-terminal signature 387 401 6.1E-13 T 01-11-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 CDA09_10850 712bc23e586f10744b88a3ca211e4e63 472 PRINTS PR00344 Bacterial sensor protein C-terminal signature 419 437 6.1E-13 T 01-11-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 CDA09_10850 712bc23e586f10744b88a3ca211e4e63 472 PRINTS PR00344 Bacterial sensor protein C-terminal signature 444 457 6.1E-13 T 01-11-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 CDA09_10850 712bc23e586f10744b88a3ca211e4e63 472 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 353 458 1.8E-20 T 01-11-2018 IPR003594 Histidine kinase/HSP90-like ATPase CDA09_10850 712bc23e586f10744b88a3ca211e4e63 472 SUPERFAMILY SSF47384 224 303 8.04E-12 T 01-11-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 CDA09_10850 712bc23e586f10744b88a3ca211e4e63 472 Pfam PF00512 His Kinase A (phospho-acceptor) domain 241 303 2.4E-9 T 01-11-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 CDA09_10850 712bc23e586f10744b88a3ca211e4e63 472 SUPERFAMILY SSF55874 295 458 8.91E-35 T 01-11-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily CDA09_11970 afcfb87ba51279e7046e418c68e83741 892 SUPERFAMILY SSF50692 694 865 5.11E-24 T 01-11-2018 IPR009010 Aspartate decarboxylase-like domain superfamily CDA09_11970 afcfb87ba51279e7046e418c68e83741 892 Gene3D G3DSA:3.30.200.200 17 673 7.3E-276 T 01-11-2018 CDA09_11970 afcfb87ba51279e7046e418c68e83741 892 TIGRFAM TIGR02693 arsenite_ox_L: arsenite oxidase, large subunit 13 785 5.7E-129 T 01-11-2018 IPR014066 Arsenite oxidase, large subunit MetaCyc: PWY-7429 CDA09_11970 afcfb87ba51279e7046e418c68e83741 892 Gene3D G3DSA:2.40.40.20 717 794 4.2E-25 T 01-11-2018 CDA09_11970 afcfb87ba51279e7046e418c68e83741 892 SUPERFAMILY SSF53706 12 706 6.67E-93 T 01-11-2018 CDA09_11970 afcfb87ba51279e7046e418c68e83741 892 Pfam PF01568 Molydopterin dinucleotide binding domain 729 785 4.8E-11 T 01-11-2018 IPR006657 Molybdopterin dinucleotide-binding domain GO:0016491|GO:0043546|GO:0055114 CDA09_11970 afcfb87ba51279e7046e418c68e83741 892 Gene3D G3DSA:3.40.50.740 126 655 7.3E-276 T 01-11-2018 CDA09_11970 afcfb87ba51279e7046e418c68e83741 892 Pfam PF00384 Molybdopterin oxidoreductase 125 595 6.5E-34 T 01-11-2018 IPR006656 Molybdopterin oxidoreductase GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 CDA09_11970 afcfb87ba51279e7046e418c68e83741 892 Gene3D G3DSA:3.40.228.10 208 465 7.3E-276 T 01-11-2018 CDA09_22630 1ac8cc77ea754ab94837c1a771a9321f 266 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 184 201 2.1E-42 T 01-11-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CDA09_22630 1ac8cc77ea754ab94837c1a771a9321f 266 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 13 30 2.1E-42 T 01-11-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CDA09_22630 1ac8cc77ea754ab94837c1a771a9321f 266 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 163 182 2.1E-42 T 01-11-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CDA09_22630 1ac8cc77ea754ab94837c1a771a9321f 266 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 90 101 2.1E-42 T 01-11-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CDA09_22630 1ac8cc77ea754ab94837c1a771a9321f 266 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 228 248 2.1E-42 T 01-11-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CDA09_22630 1ac8cc77ea754ab94837c1a771a9321f 266 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 137 153 2.1E-42 T 01-11-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CDA09_22630 1ac8cc77ea754ab94837c1a771a9321f 266 SUPERFAMILY SSF51735 11 265 3.1E-80 T 01-11-2018 IPR036291 NAD(P)-binding domain superfamily CDA09_22630 1ac8cc77ea754ab94837c1a771a9321f 266 PIRSF PIRSF000126 3 247 7.4E-52 T 01-11-2018 CDA09_22630 1ac8cc77ea754ab94837c1a771a9321f 266 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 90 101 3.5E-12 T 01-11-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CDA09_22630 1ac8cc77ea754ab94837c1a771a9321f 266 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 143 151 3.5E-12 T 01-11-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CDA09_22630 1ac8cc77ea754ab94837c1a771a9321f 266 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 163 182 3.5E-12 T 01-11-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CDA09_22630 1ac8cc77ea754ab94837c1a771a9321f 266 Gene3D G3DSA:3.40.50.720 3 266 8.8E-86 T 01-11-2018 CDA09_22630 1ac8cc77ea754ab94837c1a771a9321f 266 SMART SM00822 This enzymatic domain is part of bacterial polyketide synthases and catalyses the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain. It uses NADPH to reduce the keto group to a hydroxy group. 12 194 0.002 T 01-11-2018 CDA09_22630 1ac8cc77ea754ab94837c1a771a9321f 266 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 21 263 7.6E-61 T 01-11-2018 CDA09_22630 1ac8cc77ea754ab94837c1a771a9321f 266 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 150 178 - T 01-11-2018 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 CDA09_21080 5b94dffeea8e5f47889ffc4fd1df02c3 212 SUPERFAMILY SSF46626 127 211 4.22E-15 T 01-11-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 CDA09_21080 5b94dffeea8e5f47889ffc4fd1df02c3 212 PIRSF PIRSF000005 4 212 1.7E-35 T 01-11-2018 IPR024167 Cytochrome c4-like GO:0005506|GO:0009055|GO:0020037|GO:0042597 CDA09_21080 5b94dffeea8e5f47889ffc4fd1df02c3 212 Pfam PF13442 Cytochrome C oxidase, cbb3-type, subunit III 133 208 5.7E-7 T 01-11-2018 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 Reactome: R-HSA-111457|Reactome: R-HSA-111458|Reactome: R-HSA-111459|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 CDA09_21080 5b94dffeea8e5f47889ffc4fd1df02c3 212 Gene3D G3DSA:1.10.760.10 129 211 6.1E-16 T 01-11-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 CDA09_21080 5b94dffeea8e5f47889ffc4fd1df02c3 212 SUPERFAMILY SSF46626 49 121 6.36E-15 T 01-11-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 CDA09_21080 5b94dffeea8e5f47889ffc4fd1df02c3 212 Gene3D G3DSA:1.10.760.10 49 122 5.1E-18 T 01-11-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 CDA09_05230 f1467830c61736d5a15a99362fc9b8a6 338 PIRSF PIRSF001415 1 337 5.9E-147 T 01-11-2018 IPR001731 Delta-aminolevulinic acid dehydratase GO:0004655|GO:0033014|GO:0046872 KEGG: 00860+4.2.1.24|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451|Reactome: R-HSA-6798695 CDA09_05230 f1467830c61736d5a15a99362fc9b8a6 338 Gene3D G3DSA:3.20.20.70 3 338 7.7E-143 T 01-11-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 CDA09_05230 f1467830c61736d5a15a99362fc9b8a6 338 SMART SM01004 7 334 6.3E-237 T 01-11-2018 IPR001731 Delta-aminolevulinic acid dehydratase GO:0004655|GO:0033014|GO:0046872 KEGG: 00860+4.2.1.24|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451|Reactome: R-HSA-6798695 CDA09_05230 f1467830c61736d5a15a99362fc9b8a6 338 SUPERFAMILY SSF51569 5 335 2.93E-140 T 01-11-2018 CDA09_05230 f1467830c61736d5a15a99362fc9b8a6 338 Pfam PF00490 Delta-aminolevulinic acid dehydratase 10 333 1.6E-138 T 01-11-2018 IPR001731 Delta-aminolevulinic acid dehydratase GO:0004655|GO:0033014|GO:0046872 KEGG: 00860+4.2.1.24|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451|Reactome: R-HSA-6798695 CDA09_05230 f1467830c61736d5a15a99362fc9b8a6 338 PRINTS PR00144 Delta-aminolevulinic acid dehydratase signature 308 327 2.1E-57 T 01-11-2018 IPR001731 Delta-aminolevulinic acid dehydratase GO:0004655|GO:0033014|GO:0046872 KEGG: 00860+4.2.1.24|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451|Reactome: R-HSA-6798695 CDA09_05230 f1467830c61736d5a15a99362fc9b8a6 338 PRINTS PR00144 Delta-aminolevulinic acid dehydratase signature 278 293 2.1E-57 T 01-11-2018 IPR001731 Delta-aminolevulinic acid dehydratase GO:0004655|GO:0033014|GO:0046872 KEGG: 00860+4.2.1.24|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451|Reactome: R-HSA-6798695 CDA09_05230 f1467830c61736d5a15a99362fc9b8a6 338 PRINTS PR00144 Delta-aminolevulinic acid dehydratase signature 253 269 2.1E-57 T 01-11-2018 IPR001731 Delta-aminolevulinic acid dehydratase GO:0004655|GO:0033014|GO:0046872 KEGG: 00860+4.2.1.24|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451|Reactome: R-HSA-6798695 CDA09_05230 f1467830c61736d5a15a99362fc9b8a6 338 PRINTS PR00144 Delta-aminolevulinic acid dehydratase signature 127 141 2.1E-57 T 01-11-2018 IPR001731 Delta-aminolevulinic acid dehydratase GO:0004655|GO:0033014|GO:0046872 KEGG: 00860+4.2.1.24|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451|Reactome: R-HSA-6798695 CDA09_05230 f1467830c61736d5a15a99362fc9b8a6 338 PRINTS PR00144 Delta-aminolevulinic acid dehydratase signature 199 218 2.1E-57 T 01-11-2018 IPR001731 Delta-aminolevulinic acid dehydratase GO:0004655|GO:0033014|GO:0046872 KEGG: 00860+4.2.1.24|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451|Reactome: R-HSA-6798695 CDA09_05230 f1467830c61736d5a15a99362fc9b8a6 338 PRINTS PR00144 Delta-aminolevulinic acid dehydratase signature 161 180 2.1E-57 T 01-11-2018 IPR001731 Delta-aminolevulinic acid dehydratase GO:0004655|GO:0033014|GO:0046872 KEGG: 00860+4.2.1.24|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451|Reactome: R-HSA-6798695 CDA09_07985 b494963a3ce310008549aebb43c83177 396 SUPERFAMILY SSF53822 76 362 2.72E-25 T 01-11-2018 IPR028082 Periplasmic binding protein-like I CDA09_07985 b494963a3ce310008549aebb43c83177 396 Gene3D G3DSA:3.40.50.2300 273 357 1.2E-5 T 01-11-2018 CDA09_07985 b494963a3ce310008549aebb43c83177 396 Gene3D G3DSA:3.40.50.2300 72 159 4.7E-8 T 01-11-2018 CDA09_07985 b494963a3ce310008549aebb43c83177 396 Pfam PF13458 Periplasmic binding protein 90 241 3.4E-8 T 01-11-2018 IPR028081 Leucine-binding protein domain CDA09_07985 b494963a3ce310008549aebb43c83177 396 Gene3D G3DSA:3.40.50.2300 266 361 1.2E-5 T 01-11-2018 CDA09_07985 b494963a3ce310008549aebb43c83177 396 Gene3D G3DSA:3.40.50.2300 160 175 4.7E-8 T 01-11-2018 CDA09_07985 b494963a3ce310008549aebb43c83177 396 TIGRFAM TIGR03863 PQQ_ABC_bind: ABC transporter, substrate binding protein, PQQ-dependent alcohol dehydrogenase system 57 394 6.0E-139 T 01-11-2018 IPR022478 ABC transporter, substrate-binding protein, PQQ-dependent alcohol dehydrogenase system CDA09_18465 f0a2a3081a7c4b496f2d9985bce35835 335 Gene3D G3DSA:3.90.25.10 180 328 1.3E-98 T 01-11-2018 CDA09_18465 f0a2a3081a7c4b496f2d9985bce35835 335 Pfam PF01370 NAD dependent epimerase/dehydratase family 3 240 6.8E-58 T 01-11-2018 IPR001509 NAD-dependent epimerase/dehydratase GO:0003824|GO:0050662 CDA09_18465 f0a2a3081a7c4b496f2d9985bce35835 335 Gene3D G3DSA:3.40.50.720 4 316 1.3E-98 T 01-11-2018 CDA09_18465 f0a2a3081a7c4b496f2d9985bce35835 335 SUPERFAMILY SSF51735 1 333 3.22E-94 T 01-11-2018 IPR036291 NAD(P)-binding domain superfamily CDA09_18465 f0a2a3081a7c4b496f2d9985bce35835 335 PRINTS PR01713 Nucleotide sugar epimerase signature 29 45 2.0E-28 T 01-11-2018 CDA09_18465 f0a2a3081a7c4b496f2d9985bce35835 335 PRINTS PR01713 Nucleotide sugar epimerase signature 256 271 2.0E-28 T 01-11-2018 CDA09_18465 f0a2a3081a7c4b496f2d9985bce35835 335 PRINTS PR01713 Nucleotide sugar epimerase signature 216 231 2.0E-28 T 01-11-2018 CDA09_18465 f0a2a3081a7c4b496f2d9985bce35835 335 PRINTS PR01713 Nucleotide sugar epimerase signature 295 312 2.0E-28 T 01-11-2018 CDA09_20690 4a74f83f4d139cabfc0eee97e08631d5 245 Gene3D G3DSA:1.25.40.10 125 244 8.9E-26 T 01-11-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 CDA09_20690 4a74f83f4d139cabfc0eee97e08631d5 245 Gene3D G3DSA:1.20.5.110 39 114 1.9E-5 T 01-11-2018 CDA09_20690 4a74f83f4d139cabfc0eee97e08631d5 245 TIGRFAM TIGR02795 tol_pal_ybgF: tol-pal system protein YbgF 124 241 8.8E-36 T 01-11-2018 IPR014162 Cell division coordinator CpoB, C-terminal CDA09_20690 4a74f83f4d139cabfc0eee97e08631d5 245 SUPERFAMILY SSF48452 128 235 7.37E-12 T 01-11-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 CDA09_20690 4a74f83f4d139cabfc0eee97e08631d5 245 Pfam PF13525 Outer membrane lipoprotein 125 242 6.0E-10 T 01-11-2018 IPR039565 Outer membrane lipoprotein BamD-like CDA09_20690 4a74f83f4d139cabfc0eee97e08631d5 245 Pfam PF16331 TolA binding protein trimerisation 43 109 7.1E-21 T 01-11-2018 IPR032519 YbgF, trimerisation domain GO:0070206 CDA09_20690 4a74f83f4d139cabfc0eee97e08631d5 245 Hamap MF_02066 Cell division coordinator CpoB [cpoB]. 1 244 18.922 T 01-11-2018 IPR034706 Cell division coordinator CpoB GO:0051301 CDA09_16655 9a7cce04db2e0e9f00cd9fb0be47d888 488 Pfam PF07690 Major Facilitator Superfamily 22 418 2.0E-36 T 01-11-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 CDA09_16655 9a7cce04db2e0e9f00cd9fb0be47d888 488 SUPERFAMILY SSF103473 16 473 6.1E-50 T 01-11-2018 IPR036259 MFS transporter superfamily CDA09_16655 9a7cce04db2e0e9f00cd9fb0be47d888 488 Gene3D G3DSA:1.20.1720.10 21 226 7.4E-31 T 01-11-2018 CDA09_16655 9a7cce04db2e0e9f00cd9fb0be47d888 488 Gene3D G3DSA:1.20.1250.20 275 484 8.7E-17 T 01-11-2018 CDA09_07080 bcf2cb176745cab560339edd354b1586 400 Pfam PF02670 1-deoxy-D-xylulose 5-phosphate reductoisomerase 9 137 2.1E-44 T 01-11-2018 IPR013512 1-deoxy-D-xylulose 5-phosphate reductoisomerase, N-terminal GO:0055114|GO:0070402 KEGG: 00900+1.1.1.267|MetaCyc: PWY-7560 CDA09_07080 bcf2cb176745cab560339edd354b1586 400 Gene3D G3DSA:1.10.1740.10 312 397 3.6E-26 T 01-11-2018 CDA09_07080 bcf2cb176745cab560339edd354b1586 400 PIRSF PIRSF006205 6 399 2.5E-151 T 01-11-2018 IPR003821 1-deoxy-D-xylulose 5-phosphate reductoisomerase GO:0008299|GO:0030604|GO:0046872|GO:0055114 KEGG: 00900+1.1.1.267|MetaCyc: PWY-7560 CDA09_07080 bcf2cb176745cab560339edd354b1586 400 TIGRFAM TIGR00243 Dxr: 1-deoxy-D-xylulose 5-phosphate reductoisomerase 7 393 3.4E-157 T 01-11-2018 IPR003821 1-deoxy-D-xylulose 5-phosphate reductoisomerase GO:0008299|GO:0030604|GO:0046872|GO:0055114 KEGG: 00900+1.1.1.267|MetaCyc: PWY-7560 CDA09_07080 bcf2cb176745cab560339edd354b1586 400 SUPERFAMILY SSF51735 7 155 9.4E-46 T 01-11-2018 IPR036291 NAD(P)-binding domain superfamily CDA09_07080 bcf2cb176745cab560339edd354b1586 400 SUPERFAMILY SSF69055 302 391 6.02E-29 T 01-11-2018 IPR036169 DXP reductoisomerase, C-terminal domain superfamily KEGG: 00900+1.1.1.267|MetaCyc: PWY-7560 CDA09_07080 bcf2cb176745cab560339edd354b1586 400 Gene3D G3DSA:3.40.50.720 2 155 3.5E-51 T 01-11-2018 CDA09_07080 bcf2cb176745cab560339edd354b1586 400 SUPERFAMILY SSF55347 131 274 4.9E-62 T 01-11-2018 CDA09_07080 bcf2cb176745cab560339edd354b1586 400 Pfam PF08436 1-deoxy-D-xylulose 5-phosphate reductoisomerase C-terminal 151 239 7.6E-39 T 01-11-2018 IPR013644 1-deoxy-D-xylulose 5-phosphate reductoisomerase, C-terminal GO:0005515 KEGG: 00900+1.1.1.267|MetaCyc: PWY-7560 CDA09_07080 bcf2cb176745cab560339edd354b1586 400 Pfam PF13288 DXP reductoisomerase C-terminal domain 271 387 6.6E-41 T 01-11-2018 IPR026877 DXP reductoisomerase C-terminal domain KEGG: 00900+1.1.1.267|MetaCyc: PWY-7560 CDA09_07080 bcf2cb176745cab560339edd354b1586 400 Hamap MF_00183 1-deoxy-D-xylulose 5-phosphate reductoisomerase [dxr]. 9 392 47.16 T 01-11-2018 IPR003821 1-deoxy-D-xylulose 5-phosphate reductoisomerase GO:0008299|GO:0030604|GO:0046872|GO:0055114 KEGG: 00900+1.1.1.267|MetaCyc: PWY-7560 CDA09_17265 a32512a8d76d9e8cb53436726cc6c40f 657 SUPERFAMILY SSF55874 5 207 4.19E-55 T 01-11-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily CDA09_17265 a32512a8d76d9e8cb53436726cc6c40f 657 Gene3D G3DSA:3.30.230.10 224 402 7.5E-44 T 01-11-2018 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup CDA09_17265 a32512a8d76d9e8cb53436726cc6c40f 657 Pfam PF00204 DNA gyrase B 226 398 4.0E-36 T 01-11-2018 IPR013506 DNA topoisomerase, type IIA, subunit B, domain 2 GO:0003677|GO:0003918|GO:0005524|GO:0006265 Reactome: R-HSA-4615885 CDA09_17265 a32512a8d76d9e8cb53436726cc6c40f 657 Gene3D G3DSA:3.40.50.670 403 650 1.7E-80 T 01-11-2018 IPR013759 DNA topoisomerase, type IIA, subunit B, C-terminal GO:0003677|GO:0003918|GO:0005524|GO:0006265 Reactome: R-HSA-4615885 CDA09_17265 a32512a8d76d9e8cb53436726cc6c40f 657 Hamap MF_00938 DNA topoisomerase 4 subunit B [parE]. 3 655 43.295 T 01-11-2018 IPR005737 DNA topoisomerase IV, subunit B, Gram-negative GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 CDA09_17265 a32512a8d76d9e8cb53436726cc6c40f 657 PRINTS PR00418 DNA topoisomerase II family signature 279 292 6.7E-63 T 01-11-2018 CDA09_17265 a32512a8d76d9e8cb53436726cc6c40f 657 PRINTS PR00418 DNA topoisomerase II family signature 114 128 6.7E-63 T 01-11-2018 CDA09_17265 a32512a8d76d9e8cb53436726cc6c40f 657 PRINTS PR00418 DNA topoisomerase II family signature 514 531 6.7E-63 T 01-11-2018 CDA09_17265 a32512a8d76d9e8cb53436726cc6c40f 657 PRINTS PR00418 DNA topoisomerase II family signature 534 546 6.7E-63 T 01-11-2018 CDA09_17265 a32512a8d76d9e8cb53436726cc6c40f 657 PRINTS PR00418 DNA topoisomerase II family signature 587 603 6.7E-63 T 01-11-2018 CDA09_17265 a32512a8d76d9e8cb53436726cc6c40f 657 PRINTS PR00418 DNA topoisomerase II family signature 32 47 6.7E-63 T 01-11-2018 CDA09_17265 a32512a8d76d9e8cb53436726cc6c40f 657 PRINTS PR00418 DNA topoisomerase II family signature 427 441 6.7E-63 T 01-11-2018 CDA09_17265 a32512a8d76d9e8cb53436726cc6c40f 657 PRINTS PR00418 DNA topoisomerase II family signature 496 512 6.7E-63 T 01-11-2018 CDA09_17265 a32512a8d76d9e8cb53436726cc6c40f 657 PRINTS PR00418 DNA topoisomerase II family signature 67 80 6.7E-63 T 01-11-2018 CDA09_17265 a32512a8d76d9e8cb53436726cc6c40f 657 ProSitePatterns PS00177 DNA topoisomerase II signature. 429 437 - T 01-11-2018 IPR018522 DNA topoisomerase, type IIA, conserved site GO:0003677|GO:0003918|GO:0005524|GO:0006265 Reactome: R-HSA-4615885 CDA09_17265 a32512a8d76d9e8cb53436726cc6c40f 657 SUPERFAMILY SSF54211 226 400 1.76E-34 T 01-11-2018 IPR020568 Ribosomal protein S5 domain 2-type fold CDA09_17265 a32512a8d76d9e8cb53436726cc6c40f 657 SUPERFAMILY SSF56719 401 648 4.71E-72 T 01-11-2018 IPR013760 DNA topoisomerase, type IIA-like domain superfamily GO:0003918|GO:0005524 Reactome: R-HSA-4615885 CDA09_17265 a32512a8d76d9e8cb53436726cc6c40f 657 SMART SM00433 35 651 7.7E-189 T 01-11-2018 IPR001241 DNA topoisomerase, type IIA GO:0003677|GO:0003918|GO:0005524|GO:0006265 Reactome: R-HSA-4615885 CDA09_17265 a32512a8d76d9e8cb53436726cc6c40f 657 Pfam PF00986 DNA gyrase B subunit, carboxyl terminus 585 647 2.9E-22 T 01-11-2018 IPR002288 DNA gyrase B subunit, C-terminal GO:0003677|GO:0003918|GO:0005524|GO:0006265 CDA09_17265 a32512a8d76d9e8cb53436726cc6c40f 657 SMART SM00387 28 178 7.3E-13 T 01-11-2018 IPR003594 Histidine kinase/HSP90-like ATPase CDA09_17265 a32512a8d76d9e8cb53436726cc6c40f 657 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 34 175 2.0E-14 T 01-11-2018 IPR003594 Histidine kinase/HSP90-like ATPase CDA09_17265 a32512a8d76d9e8cb53436726cc6c40f 657 PRINTS PR01098 Topoisomerase IV subunit B signature 27 40 5.4E-32 T 01-11-2018 IPR005737 DNA topoisomerase IV, subunit B, Gram-negative GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 CDA09_17265 a32512a8d76d9e8cb53436726cc6c40f 657 PRINTS PR01098 Topoisomerase IV subunit B signature 179 196 5.4E-32 T 01-11-2018 IPR005737 DNA topoisomerase IV, subunit B, Gram-negative GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 CDA09_17265 a32512a8d76d9e8cb53436726cc6c40f 657 PRINTS PR01098 Topoisomerase IV subunit B signature 324 339 5.4E-32 T 01-11-2018 IPR005737 DNA topoisomerase IV, subunit B, Gram-negative GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 CDA09_17265 a32512a8d76d9e8cb53436726cc6c40f 657 PRINTS PR01098 Topoisomerase IV subunit B signature 375 400 5.4E-32 T 01-11-2018 IPR005737 DNA topoisomerase IV, subunit B, Gram-negative GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 CDA09_17265 a32512a8d76d9e8cb53436726cc6c40f 657 PRINTS PR01098 Topoisomerase IV subunit B signature 351 374 5.4E-32 T 01-11-2018 IPR005737 DNA topoisomerase IV, subunit B, Gram-negative GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 CDA09_17265 a32512a8d76d9e8cb53436726cc6c40f 657 PRINTS PR01098 Topoisomerase IV subunit B signature 307 323 5.4E-32 T 01-11-2018 IPR005737 DNA topoisomerase IV, subunit B, Gram-negative GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 CDA09_17265 a32512a8d76d9e8cb53436726cc6c40f 657 PRINTS PR01098 Topoisomerase IV subunit B signature 461 482 5.4E-32 T 01-11-2018 IPR005737 DNA topoisomerase IV, subunit B, Gram-negative GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 CDA09_17265 a32512a8d76d9e8cb53436726cc6c40f 657 Pfam PF01751 Toprim domain 426 539 7.8E-12 T 01-11-2018 IPR006171 TOPRIM domain CDA09_17265 a32512a8d76d9e8cb53436726cc6c40f 657 Gene3D G3DSA:3.30.565.10 3 215 4.6E-66 T 01-11-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily CDA09_16740 ce86bd9cbc73d824a2d87551648f2591 770 Gene3D G3DSA:3.30.980.40 279 383 2.8E-29 T 01-11-2018 CDA09_16740 ce86bd9cbc73d824a2d87551648f2591 770 Pfam PF09397 Ftsk gamma domain 704 764 4.4E-26 T 01-11-2018 IPR018541 FtsK gamma domain CDA09_16740 ce86bd9cbc73d824a2d87551648f2591 770 Pfam PF01580 FtsK/SpoIIIE family 386 596 1.3E-65 T 01-11-2018 IPR002543 FtsK domain GO:0000166|GO:0003677|GO:0005524 CDA09_16740 ce86bd9cbc73d824a2d87551648f2591 770 SUPERFAMILY SSF46785 702 767 1.02E-21 T 01-11-2018 IPR036390 Winged helix DNA-binding domain superfamily CDA09_16740 ce86bd9cbc73d824a2d87551648f2591 770 Gene3D G3DSA:1.10.10.10 698 763 1.8E-27 T 01-11-2018 IPR036388 Winged helix-like DNA-binding domain superfamily CDA09_16740 ce86bd9cbc73d824a2d87551648f2591 770 SMART SM00843 702 767 2.2E-38 T 01-11-2018 IPR018541 FtsK gamma domain CDA09_16740 ce86bd9cbc73d824a2d87551648f2591 770 Gene3D G3DSA:3.40.50.300 384 682 3.8E-115 T 01-11-2018 CDA09_16740 ce86bd9cbc73d824a2d87551648f2591 770 SUPERFAMILY SSF52540 375 668 6.11E-53 T 01-11-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CDA09_16740 ce86bd9cbc73d824a2d87551648f2591 770 Pfam PF13491 4TM region of DNA translocase FtsK/SpoIIIE 19 192 1.3E-46 T 01-11-2018 IPR025199 DNA translocase FtsK, 4TM region CDA09_15280 5b4c52538a0f0accb4647a05c0985f56 79 SUPERFAMILY SSF47336 1 77 4.97E-25 T 01-11-2018 IPR036736 ACP-like superfamily CDA09_15280 5b4c52538a0f0accb4647a05c0985f56 79 ProSitePatterns PS00012 Phosphopantetheine attachment site. 32 47 - T 01-11-2018 IPR006162 Phosphopantetheine attachment site CDA09_15280 5b4c52538a0f0accb4647a05c0985f56 79 ProDom PD000887 CARRIER ACYL PHOSPHOPANTETHEINE ACP ACID FATTY BIOSYNTHESIS LIPID SYNTHESIS CHLOROPLAST 41 77 0.001 T 01-11-2018 IPR003231 Acyl carrier protein (ACP) GO:0006633 Reactome: R-HSA-389661|Reactome: R-HSA-611105|Reactome: R-HSA-6799198|Reactome: R-HSA-77289 CDA09_15280 5b4c52538a0f0accb4647a05c0985f56 79 Gene3D G3DSA:1.10.1200.10 1 77 2.9E-30 T 01-11-2018 IPR036736 ACP-like superfamily CDA09_15280 5b4c52538a0f0accb4647a05c0985f56 79 TIGRFAM TIGR00517 acyl_carrier: acyl carrier protein 1 75 1.9E-35 T 01-11-2018 IPR003231 Acyl carrier protein (ACP) GO:0006633 Reactome: R-HSA-389661|Reactome: R-HSA-611105|Reactome: R-HSA-6799198|Reactome: R-HSA-77289 CDA09_15280 5b4c52538a0f0accb4647a05c0985f56 79 Hamap MF_01217 Acyl carrier protein [acpP]. 3 77 22.719 T 01-11-2018 IPR003231 Acyl carrier protein (ACP) GO:0006633 Reactome: R-HSA-389661|Reactome: R-HSA-611105|Reactome: R-HSA-6799198|Reactome: R-HSA-77289 CDA09_15280 5b4c52538a0f0accb4647a05c0985f56 79 Pfam PF00550 Phosphopantetheine attachment site 6 73 1.7E-17 T 01-11-2018 IPR009081 Phosphopantetheine binding ACP domain CDA09_02115 4d5ed6ef97da84c45b91b9aeef3805a4 158 ProSitePatterns PS00197 2Fe-2S ferredoxin-type iron-sulfur binding region signature. 41 49 - T 01-11-2018 IPR006058 2Fe-2S ferredoxin, iron-sulphur binding site GO:0051537 CDA09_02115 4d5ed6ef97da84c45b91b9aeef3805a4 158 Pfam PF00111 2Fe-2S iron-sulfur cluster binding domain 8 65 1.9E-7 T 01-11-2018 IPR001041 2Fe-2S ferredoxin-type iron-sulfur binding domain GO:0009055|GO:0051536 CDA09_02115 4d5ed6ef97da84c45b91b9aeef3805a4 158 TIGRFAM TIGR03193 4hydroxCoAred: 4-hydroxybenzoyl-CoA reductase, gamma subunit 4 150 1.8E-87 T 01-11-2018 IPR017606 4-hydroxybenzoyl-CoA reductase, gamma subunit KEGG: 00362+1.3.7.9|KEGG: 00627+1.3.7.9|MetaCyc: PWY-6080|MetaCyc: PWY-7046 CDA09_02115 4d5ed6ef97da84c45b91b9aeef3805a4 158 Gene3D G3DSA:1.10.150.120 79 158 3.0E-33 T 01-11-2018 CDA09_02115 4d5ed6ef97da84c45b91b9aeef3805a4 158 Pfam PF01799 [2Fe-2S] binding domain 75 147 2.2E-30 T 01-11-2018 IPR002888 [2Fe-2S]-binding GO:0016491|GO:0046872|GO:0055114 CDA09_02115 4d5ed6ef97da84c45b91b9aeef3805a4 158 Gene3D G3DSA:3.10.20.30 1 78 3.6E-30 T 01-11-2018 IPR012675 Beta-grasp domain superfamily CDA09_02115 4d5ed6ef97da84c45b91b9aeef3805a4 158 SUPERFAMILY SSF54292 5 80 7.87E-24 T 01-11-2018 IPR036010 2Fe-2S ferredoxin-like superfamily GO:0009055|GO:0051536 CDA09_02115 4d5ed6ef97da84c45b91b9aeef3805a4 158 SUPERFAMILY SSF47741 86 153 9.42E-32 T 01-11-2018 IPR036884 [2Fe-2S]-binding domain superfamily CDA09_07660 e333bb7e0e13716347e51dbaf31a55b7 205 PRINTS PR00344 Bacterial sensor protein C-terminal signature 160 173 4.1E-14 T 01-11-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 CDA09_07660 e333bb7e0e13716347e51dbaf31a55b7 205 PRINTS PR00344 Bacterial sensor protein C-terminal signature 103 117 4.1E-14 T 01-11-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 CDA09_07660 e333bb7e0e13716347e51dbaf31a55b7 205 PRINTS PR00344 Bacterial sensor protein C-terminal signature 121 131 4.1E-14 T 01-11-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 CDA09_07660 e333bb7e0e13716347e51dbaf31a55b7 205 PRINTS PR00344 Bacterial sensor protein C-terminal signature 136 154 4.1E-14 T 01-11-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 CDA09_07660 e333bb7e0e13716347e51dbaf31a55b7 205 Gene3D G3DSA:3.30.565.10 1 171 3.4E-42 T 01-11-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily CDA09_07660 e333bb7e0e13716347e51dbaf31a55b7 205 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 64 175 1.6E-24 T 01-11-2018 IPR003594 Histidine kinase/HSP90-like ATPase CDA09_07660 e333bb7e0e13716347e51dbaf31a55b7 205 SMART SM00387 63 176 2.4E-29 T 01-11-2018 IPR003594 Histidine kinase/HSP90-like ATPase CDA09_07660 e333bb7e0e13716347e51dbaf31a55b7 205 SUPERFAMILY SSF55874 6 174 3.41E-40 T 01-11-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily CDA09_09520 6781c8cea4f2985d1d36c3c790cce409 726 Pfam PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain 628 711 9.8E-6 T 01-11-2018 IPR006108 3-hydroxyacyl-CoA dehydrogenase, C-terminal GO:0003857|GO:0006631|GO:0016491|GO:0055114 KEGG: 00062+4.2.1.17+1.1.1.35|KEGG: 00071+4.2.1.17+1.1.1.35|KEGG: 00120+1.1.1.35|KEGG: 00280+4.2.1.17+1.1.1.35|KEGG: 00281+4.2.1.17+1.1.1.35|KEGG: 00310+4.2.1.17+1.1.1.35|KEGG: 00360+4.2.1.17|KEGG: 00362+4.2.1.17+1.1.1.35|KEGG: 00380+4.2.1.17+1.1.1.35|KEGG: 00410+4.2.1.17|KEGG: 00592+4.2.1.17|KEGG: 00623+1.1.1.35|KEGG: 00627+4.2.1.17|KEGG: 00640+4.2.1.17|KEGG: 00650+4.2.1.17+1.1.1.35|KEGG: 00720+4.2.1.17+1.1.1.35|KEGG: 00903+4.2.1.17|KEGG: 00930+4.2.1.17+1.1.1.35|MetaCyc: PWY-1361|MetaCyc: PWY-5109|MetaCyc: PWY-5136|MetaCyc: PWY-5138|MetaCyc: PWY-5177|MetaCyc: PWY-5789|MetaCyc: PWY-6435|MetaCyc: PWY-6583|MetaCyc: PWY-6863|MetaCyc: PWY-6883|MetaCyc: PWY-6944|MetaCyc: PWY-6945|MetaCyc: PWY-6946|MetaCyc: PWY-7007|MetaCyc: PWY-7046|MetaCyc: PWY-7094|MetaCyc: PWY-7216|MetaCyc: PWY-735|MetaCyc: PWY-7401|MetaCyc: PWY-7606|MetaCyc: PWY-7654|MetaCyc: PWY-7656|MetaCyc: PWY-7726|MetaCyc: PWY-7778|MetaCyc: PWY-7779 CDA09_09520 6781c8cea4f2985d1d36c3c790cce409 726 Pfam PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain 501 598 5.3E-20 T 01-11-2018 IPR006108 3-hydroxyacyl-CoA dehydrogenase, C-terminal GO:0003857|GO:0006631|GO:0016491|GO:0055114 KEGG: 00062+4.2.1.17+1.1.1.35|KEGG: 00071+4.2.1.17+1.1.1.35|KEGG: 00120+1.1.1.35|KEGG: 00280+4.2.1.17+1.1.1.35|KEGG: 00281+4.2.1.17+1.1.1.35|KEGG: 00310+4.2.1.17+1.1.1.35|KEGG: 00360+4.2.1.17|KEGG: 00362+4.2.1.17+1.1.1.35|KEGG: 00380+4.2.1.17+1.1.1.35|KEGG: 00410+4.2.1.17|KEGG: 00592+4.2.1.17|KEGG: 00623+1.1.1.35|KEGG: 00627+4.2.1.17|KEGG: 00640+4.2.1.17|KEGG: 00650+4.2.1.17+1.1.1.35|KEGG: 00720+4.2.1.17+1.1.1.35|KEGG: 00903+4.2.1.17|KEGG: 00930+4.2.1.17+1.1.1.35|MetaCyc: PWY-1361|MetaCyc: PWY-5109|MetaCyc: PWY-5136|MetaCyc: PWY-5138|MetaCyc: PWY-5177|MetaCyc: PWY-5789|MetaCyc: PWY-6435|MetaCyc: PWY-6583|MetaCyc: PWY-6863|MetaCyc: PWY-6883|MetaCyc: PWY-6944|MetaCyc: PWY-6945|MetaCyc: PWY-6946|MetaCyc: PWY-7007|MetaCyc: PWY-7046|MetaCyc: PWY-7094|MetaCyc: PWY-7216|MetaCyc: PWY-735|MetaCyc: PWY-7401|MetaCyc: PWY-7606|MetaCyc: PWY-7654|MetaCyc: PWY-7656|MetaCyc: PWY-7726|MetaCyc: PWY-7778|MetaCyc: PWY-7779 CDA09_09520 6781c8cea4f2985d1d36c3c790cce409 726 Gene3D G3DSA:3.40.50.720 318 501 1.8E-67 T 01-11-2018 CDA09_09520 6781c8cea4f2985d1d36c3c790cce409 726 Gene3D G3DSA:3.90.226.10 1 317 2.5E-97 T 01-11-2018 CDA09_09520 6781c8cea4f2985d1d36c3c790cce409 726 Gene3D G3DSA:1.10.1040.50 502 704 7.6E-61 T 01-11-2018 CDA09_09520 6781c8cea4f2985d1d36c3c790cce409 726 Pfam PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain 320 498 3.9E-62 T 01-11-2018 IPR006176 3-hydroxyacyl-CoA dehydrogenase, NAD binding GO:0003857|GO:0006631|GO:0016491|GO:0055114 KEGG: 00062+4.2.1.17+1.1.1.35|KEGG: 00071+4.2.1.17+1.1.1.35|KEGG: 00120+1.1.1.35|KEGG: 00280+4.2.1.17+1.1.1.35|KEGG: 00281+4.2.1.17+1.1.1.35|KEGG: 00310+4.2.1.17+1.1.1.35|KEGG: 00360+4.2.1.17|KEGG: 00362+4.2.1.17+1.1.1.35|KEGG: 00380+4.2.1.17+1.1.1.35|KEGG: 00410+4.2.1.17|KEGG: 00592+4.2.1.17|KEGG: 00623+1.1.1.35|KEGG: 00627+4.2.1.17|KEGG: 00640+4.2.1.17|KEGG: 00650+4.2.1.17+1.1.1.35|KEGG: 00720+4.2.1.17+1.1.1.35|KEGG: 00903+4.2.1.17|KEGG: 00930+4.2.1.17+1.1.1.35|MetaCyc: PWY-1361|MetaCyc: PWY-5109|MetaCyc: PWY-5136|MetaCyc: PWY-5138|MetaCyc: PWY-5177|MetaCyc: PWY-5789|MetaCyc: PWY-6435|MetaCyc: PWY-6583|MetaCyc: PWY-6863|MetaCyc: PWY-6883|MetaCyc: PWY-6944|MetaCyc: PWY-6945|MetaCyc: PWY-6946|MetaCyc: PWY-7007|MetaCyc: PWY-7046|MetaCyc: PWY-7094|MetaCyc: PWY-7216|MetaCyc: PWY-735|MetaCyc: PWY-7401|MetaCyc: PWY-7606|MetaCyc: PWY-7654|MetaCyc: PWY-7656|MetaCyc: PWY-7726|MetaCyc: PWY-7778|MetaCyc: PWY-7779 CDA09_09520 6781c8cea4f2985d1d36c3c790cce409 726 Pfam PF00378 Enoyl-CoA hydratase/isomerase 13 204 9.9E-40 T 01-11-2018 IPR001753 Enoyl-CoA hydratase/isomerase GO:0003824 CDA09_09520 6781c8cea4f2985d1d36c3c790cce409 726 SUPERFAMILY SSF48179 500 636 1.87E-23 T 01-11-2018 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily GO:0055114 CDA09_09520 6781c8cea4f2985d1d36c3c790cce409 726 SUPERFAMILY SSF51735 317 500 2.03E-59 T 01-11-2018 IPR036291 NAD(P)-binding domain superfamily CDA09_09520 6781c8cea4f2985d1d36c3c790cce409 726 SUPERFAMILY SSF52096 3 311 3.05E-66 T 01-11-2018 IPR029045 ClpP/crotonase-like domain superfamily CDA09_09520 6781c8cea4f2985d1d36c3c790cce409 726 SUPERFAMILY SSF48179 624 714 1.79E-21 T 01-11-2018 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily GO:0055114 CDA09_20170 49d2f1b7432280afc15849e11a64b86d 608 Pfam PF06276 Ferric iron reductase FhuF-like transporter 426 587 1.9E-38 T 01-11-2018 IPR022770 Ferric iron reductase FhuF domain CDA09_20170 49d2f1b7432280afc15849e11a64b86d 608 Gene3D G3DSA:1.10.150.640 19 145 3.3E-11 T 01-11-2018 CDA09_20170 49d2f1b7432280afc15849e11a64b86d 608 Gene3D G3DSA:1.10.510.40 402 580 3.7E-26 T 01-11-2018 CDA09_20170 49d2f1b7432280afc15849e11a64b86d 608 Pfam PF04183 IucA / IucC family 166 395 4.3E-59 T 01-11-2018 IPR007310 Aerobactin siderophore biosynthesis, IucA/IucC, N-terminal GO:0019290 CDA09_20170 49d2f1b7432280afc15849e11a64b86d 608 Gene3D G3DSA:3.10.450.440 39 109 3.3E-11 T 01-11-2018 CDA09_07335 59aa25516b8fd4b719bf186c86dfd8aa 413 Pfam PF00990 Diguanylate cyclase, GGDEF domain 239 396 5.8E-45 T 01-11-2018 IPR000160 GGDEF domain CDA09_07335 59aa25516b8fd4b719bf186c86dfd8aa 413 SMART SM00086 186 228 6.0E-9 T 01-11-2018 IPR001610 PAC motif CDA09_07335 59aa25516b8fd4b719bf186c86dfd8aa 413 SMART SM00091 114 180 5.4E-9 T 01-11-2018 IPR000014 PAS domain CDA09_07335 59aa25516b8fd4b719bf186c86dfd8aa 413 Gene3D G3DSA:3.30.70.270 242 406 9.9E-56 T 01-11-2018 CDA09_07335 59aa25516b8fd4b719bf186c86dfd8aa 413 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 236 399 7.4E-53 T 01-11-2018 IPR000160 GGDEF domain CDA09_07335 59aa25516b8fd4b719bf186c86dfd8aa 413 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 114 235 1.5E-25 T 01-11-2018 IPR000014 PAS domain CDA09_07335 59aa25516b8fd4b719bf186c86dfd8aa 413 SUPERFAMILY SSF55073 244 399 3.53E-48 T 01-11-2018 IPR029787 Nucleotide cyclase CDA09_07335 59aa25516b8fd4b719bf186c86dfd8aa 413 Gene3D G3DSA:3.30.450.20 109 241 1.2E-37 T 01-11-2018 CDA09_07335 59aa25516b8fd4b719bf186c86dfd8aa 413 SMART SM00267 228 400 1.5E-54 T 01-11-2018 IPR000160 GGDEF domain CDA09_07335 59aa25516b8fd4b719bf186c86dfd8aa 413 Pfam PF13426 PAS domain 124 227 7.4E-20 T 01-11-2018 IPR000014 PAS domain CDA09_07335 59aa25516b8fd4b719bf186c86dfd8aa 413 SUPERFAMILY SSF55785 121 228 9.07E-30 T 01-11-2018 IPR035965 PAS domain superfamily CDA09_03425 d2feb8b9be7a0f22ad5e5e7cee6138ad 67 Pfam PF00313 'Cold-shock' DNA-binding domain 3 66 7.4E-32 T 01-11-2018 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 CDA09_03425 d2feb8b9be7a0f22ad5e5e7cee6138ad 67 SUPERFAMILY SSF50249 1 65 3.43E-26 T 01-11-2018 IPR012340 Nucleic acid-binding, OB-fold CDA09_03425 d2feb8b9be7a0f22ad5e5e7cee6138ad 67 PIRSF PIRSF002599 1 67 8.3E-25 T 01-11-2018 IPR012156 Cold shock, CspA GO:0003676 CDA09_03425 d2feb8b9be7a0f22ad5e5e7cee6138ad 67 PRINTS PR00050 Cold shock protein signature 25 34 5.0E-18 T 01-11-2018 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 CDA09_03425 d2feb8b9be7a0f22ad5e5e7cee6138ad 67 PRINTS PR00050 Cold shock protein signature 40 58 5.0E-18 T 01-11-2018 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 CDA09_03425 d2feb8b9be7a0f22ad5e5e7cee6138ad 67 PRINTS PR00050 Cold shock protein signature 4 19 5.0E-18 T 01-11-2018 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 CDA09_03425 d2feb8b9be7a0f22ad5e5e7cee6138ad 67 ProSitePatterns PS00352 'Cold-shock' domain signature. 15 34 - T 01-11-2018 IPR019844 Cold-shock conserved site CDA09_03425 d2feb8b9be7a0f22ad5e5e7cee6138ad 67 Gene3D G3DSA:2.40.50.140 1 66 3.7E-31 T 01-11-2018 CDA09_03425 d2feb8b9be7a0f22ad5e5e7cee6138ad 67 SMART SM00357 3 67 1.3E-32 T 01-11-2018 IPR011129 Cold shock domain GO:0003676 CDA09_09690 b855b254e09ab27fca2f1986afa25b2e 327 SUPERFAMILY SSF50939 43 309 1.63E-36 T 01-11-2018 IPR036278 Sialidase superfamily KEGG: 00511+3.2.1.18|KEGG: 00600+3.2.1.18|Reactome: R-HSA-1660662|Reactome: R-HSA-4085001 CDA09_09690 b855b254e09ab27fca2f1986afa25b2e 327 Gene3D G3DSA:2.130.10.10 29 215 7.8E-16 T 01-11-2018 IPR015943 WD40/YVTN repeat-like-containing domain superfamily GO:0005515 CDA09_09690 b855b254e09ab27fca2f1986afa25b2e 327 Gene3D G3DSA:2.130.10.10 216 319 4.9E-6 T 01-11-2018 IPR015943 WD40/YVTN repeat-like-containing domain superfamily GO:0005515 CDA09_09690 b855b254e09ab27fca2f1986afa25b2e 327 Pfam PF14870 Photosynthesis system II assembly factor YCF48 48 105 3.2E-6 T 01-11-2018 IPR028203 Photosynthesis system II assembly factor Ycf48/Hcf136-like domain CDA09_21235 b9666dd6c9c44cf48cbb0c89d194784c 112 PIRSF PIRSF039144 1 112 1.5E-53 T 01-11-2018 IPR002187 Nitrogen regulatory protein PII GO:0006808|GO:0030234 CDA09_21235 b9666dd6c9c44cf48cbb0c89d194784c 112 Pfam PF00543 Nitrogen regulatory protein P-II 4 105 1.5E-41 T 01-11-2018 IPR002187 Nitrogen regulatory protein PII GO:0006808|GO:0030234 CDA09_21235 b9666dd6c9c44cf48cbb0c89d194784c 112 SUPERFAMILY SSF54913 1 112 2.7E-44 T 01-11-2018 IPR011322 Nitrogen regulatory PII-like, alpha/beta CDA09_21235 b9666dd6c9c44cf48cbb0c89d194784c 112 ProSitePatterns PS00638 P-II protein C-terminal region signature. 83 96 - T 01-11-2018 IPR017918 Nitrogen regulatory protein PII, conserved site GO:0006808|GO:0030234 CDA09_21235 b9666dd6c9c44cf48cbb0c89d194784c 112 ProSitePatterns PS00496 P-II protein uridylation site. 46 51 - T 01-11-2018 IPR002332 Nitrogen regulatory protein P-II, urydylation site GO:0006808|GO:0030234 CDA09_21235 b9666dd6c9c44cf48cbb0c89d194784c 112 Gene3D G3DSA:3.30.70.120 1 112 1.1E-45 T 01-11-2018 IPR015867 Nitrogen regulatory protein PII/ATP phosphoribosyltransferase, C-terminal CDA09_21235 b9666dd6c9c44cf48cbb0c89d194784c 112 PRINTS PR00340 P-II protein signature 2 17 2.1E-41 T 01-11-2018 IPR002187 Nitrogen regulatory protein PII GO:0006808|GO:0030234 CDA09_21235 b9666dd6c9c44cf48cbb0c89d194784c 112 PRINTS PR00340 P-II protein signature 52 75 2.1E-41 T 01-11-2018 IPR002187 Nitrogen regulatory protein PII GO:0006808|GO:0030234 CDA09_21235 b9666dd6c9c44cf48cbb0c89d194784c 112 PRINTS PR00340 P-II protein signature 23 41 2.1E-41 T 01-11-2018 IPR002187 Nitrogen regulatory protein PII GO:0006808|GO:0030234 CDA09_21235 b9666dd6c9c44cf48cbb0c89d194784c 112 PRINTS PR00340 P-II protein signature 83 103 2.1E-41 T 01-11-2018 IPR002187 Nitrogen regulatory protein PII GO:0006808|GO:0030234 CDA09_21235 b9666dd6c9c44cf48cbb0c89d194784c 112 SMART SM00938 4 105 4.6E-65 T 01-11-2018 IPR002187 Nitrogen regulatory protein PII GO:0006808|GO:0030234 CDA09_07100 5f7bb754d3bf6a11422da94fbb5e8ac9 340 Gene3D G3DSA:3.40.1390.10 1 95 5.3E-29 T 01-11-2018 CDA09_07100 5f7bb754d3bf6a11422da94fbb5e8ac9 340 Hamap MF_00523 UDP-3-O-(3-hydroxymyristoyl)glucosamine N-acyltransferase [lpxD]. 7 323 36.742 T 01-11-2018 IPR007691 UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase LpxD GO:0009245|GO:0016410 CDA09_07100 5f7bb754d3bf6a11422da94fbb5e8ac9 340 Pfam PF04613 UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase, LpxD 22 87 1.3E-22 T 01-11-2018 IPR020573 UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase, non-repeat region GO:0009245|GO:0016747 CDA09_07100 5f7bb754d3bf6a11422da94fbb5e8ac9 340 ProSitePatterns PS00101 Hexapeptide-repeat containing-transferases signature. 222 250 - T 01-11-2018 IPR018357 Hexapeptide transferase, conserved site GO:0016740 Reactome: R-HSA-446205 CDA09_07100 5f7bb754d3bf6a11422da94fbb5e8ac9 340 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 196 213 0.0029 T 01-11-2018 IPR001451 Hexapeptide repeat CDA09_07100 5f7bb754d3bf6a11422da94fbb5e8ac9 340 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 219 254 4.9E-6 T 01-11-2018 IPR001451 Hexapeptide repeat CDA09_07100 5f7bb754d3bf6a11422da94fbb5e8ac9 340 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 144 175 6.9E-7 T 01-11-2018 IPR001451 Hexapeptide repeat CDA09_07100 5f7bb754d3bf6a11422da94fbb5e8ac9 340 Pfam PF14602 Hexapeptide repeat of succinyl-transferase 114 136 0.047 T 01-11-2018 IPR001451 Hexapeptide repeat CDA09_07100 5f7bb754d3bf6a11422da94fbb5e8ac9 340 Pfam PF14602 Hexapeptide repeat of succinyl-transferase 256 290 4.3E-7 T 01-11-2018 IPR001451 Hexapeptide repeat CDA09_07100 5f7bb754d3bf6a11422da94fbb5e8ac9 340 SUPERFAMILY SSF51161 30 314 1.57E-77 T 01-11-2018 IPR011004 Trimeric LpxA-like superfamily CDA09_07100 5f7bb754d3bf6a11422da94fbb5e8ac9 340 Gene3D G3DSA:2.160.10.10 98 305 1.7E-62 T 01-11-2018 CDA09_07100 5f7bb754d3bf6a11422da94fbb5e8ac9 340 TIGRFAM TIGR01853 lipid_A_lpxD: UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase LpxD 6 326 2.0E-110 T 01-11-2018 IPR007691 UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase LpxD GO:0009245|GO:0016410 CDA09_07100 5f7bb754d3bf6a11422da94fbb5e8ac9 340 ProSitePatterns PS00101 Hexapeptide-repeat containing-transferases signature. 126 154 - T 01-11-2018 IPR018357 Hexapeptide transferase, conserved site GO:0016740 Reactome: R-HSA-446205 CDA09_16720 e1ca69d0f6f746ac14fd3aef1c3fee22 427 Hamap MF_00176 Serine--tRNA ligase [serS]. 1 422 39.502 T 01-11-2018 IPR002317 Serine-tRNA ligase, type1 GO:0000166|GO:0004828|GO:0005524|GO:0005737|GO:0006434 KEGG: 00970+6.1.1.11|MetaCyc: PWY-6281 CDA09_16720 e1ca69d0f6f746ac14fd3aef1c3fee22 427 TIGRFAM TIGR00414 serS: serine--tRNA ligase 1 417 3.3E-162 T 01-11-2018 IPR002317 Serine-tRNA ligase, type1 GO:0000166|GO:0004828|GO:0005524|GO:0005737|GO:0006434 KEGG: 00970+6.1.1.11|MetaCyc: PWY-6281 CDA09_16720 e1ca69d0f6f746ac14fd3aef1c3fee22 427 PRINTS PR00981 Seryl-tRNA synthetase signature 352 368 2.6E-30 T 01-11-2018 IPR002317 Serine-tRNA ligase, type1 GO:0000166|GO:0004828|GO:0005524|GO:0005737|GO:0006434 KEGG: 00970+6.1.1.11|MetaCyc: PWY-6281 CDA09_16720 e1ca69d0f6f746ac14fd3aef1c3fee22 427 PRINTS PR00981 Seryl-tRNA synthetase signature 265 277 2.6E-30 T 01-11-2018 IPR002317 Serine-tRNA ligase, type1 GO:0000166|GO:0004828|GO:0005524|GO:0005737|GO:0006434 KEGG: 00970+6.1.1.11|MetaCyc: PWY-6281 CDA09_16720 e1ca69d0f6f746ac14fd3aef1c3fee22 427 PRINTS PR00981 Seryl-tRNA synthetase signature 277 290 2.6E-30 T 01-11-2018 IPR002317 Serine-tRNA ligase, type1 GO:0000166|GO:0004828|GO:0005524|GO:0005737|GO:0006434 KEGG: 00970+6.1.1.11|MetaCyc: PWY-6281 CDA09_16720 e1ca69d0f6f746ac14fd3aef1c3fee22 427 PRINTS PR00981 Seryl-tRNA synthetase signature 317 330 2.6E-30 T 01-11-2018 IPR002317 Serine-tRNA ligase, type1 GO:0000166|GO:0004828|GO:0005524|GO:0005737|GO:0006434 KEGG: 00970+6.1.1.11|MetaCyc: PWY-6281 CDA09_16720 e1ca69d0f6f746ac14fd3aef1c3fee22 427 PRINTS PR00981 Seryl-tRNA synthetase signature 334 350 2.6E-30 T 01-11-2018 IPR002317 Serine-tRNA ligase, type1 GO:0000166|GO:0004828|GO:0005524|GO:0005737|GO:0006434 KEGG: 00970+6.1.1.11|MetaCyc: PWY-6281 CDA09_16720 e1ca69d0f6f746ac14fd3aef1c3fee22 427 Gene3D G3DSA:1.10.287.40 1 104 6.4E-21 T 01-11-2018 CDA09_16720 e1ca69d0f6f746ac14fd3aef1c3fee22 427 SUPERFAMILY SSF55681 116 418 1.91E-97 T 01-11-2018 CDA09_16720 e1ca69d0f6f746ac14fd3aef1c3fee22 427 PIRSF PIRSF001529 1 426 4.2E-176 T 01-11-2018 IPR002317 Serine-tRNA ligase, type1 GO:0000166|GO:0004828|GO:0005524|GO:0005737|GO:0006434 KEGG: 00970+6.1.1.11|MetaCyc: PWY-6281 CDA09_16720 e1ca69d0f6f746ac14fd3aef1c3fee22 427 Pfam PF02403 Seryl-tRNA synthetase N-terminal domain 1 107 4.2E-28 T 01-11-2018 IPR015866 Serine-tRNA synthetase, type1, N-terminal KEGG: 00970+6.1.1.11|MetaCyc: PWY-6281|Reactome: R-HSA-2408557|Reactome: R-HSA-379716 CDA09_16720 e1ca69d0f6f746ac14fd3aef1c3fee22 427 SUPERFAMILY SSF46589 1 112 4.39E-29 T 01-11-2018 IPR010978 Class I and II aminoacyl-tRNA synthetase, tRNA-binding arm GO:0000166 CDA09_16720 e1ca69d0f6f746ac14fd3aef1c3fee22 427 Pfam PF00587 tRNA synthetase class II core domain (G, H, P, S and T) 223 400 2.1E-34 T 01-11-2018 IPR002314 Aminoacyl-tRNA synthetase, class II (G/ P/ S/T) GO:0000166|GO:0004812|GO:0005524|GO:0006418 CDA09_16720 e1ca69d0f6f746ac14fd3aef1c3fee22 427 Gene3D G3DSA:3.30.930.10 105 426 1.1E-111 T 01-11-2018 CDA09_19755 6d0f401dc1652533ae701934d8521c62 321 Gene3D G3DSA:3.90.10.10 170 266 8.4E-11 T 01-11-2018 CDA09_19755 6d0f401dc1652533ae701934d8521c62 321 TIGRFAM TIGR01905 paired_CXXCH_1: doubled CXXCH domain 176 217 2.9E-10 T 01-11-2018 IPR010177 Doubled CXXCH motif CDA09_19755 6d0f401dc1652533ae701934d8521c62 321 TIGRFAM TIGR01905 paired_CXXCH_1: doubled CXXCH domain 225 262 3.0E-10 T 01-11-2018 IPR010177 Doubled CXXCH motif CDA09_19755 6d0f401dc1652533ae701934d8521c62 321 SUPERFAMILY SSF48695 36 310 9.41E-42 T 01-11-2018 IPR036280 Multiheme cytochrome superfamily CDA09_19755 6d0f401dc1652533ae701934d8521c62 321 Pfam PF09699 Doubled CXXCH motif (Paired_CXXCH_1) 225 262 1.9E-10 T 01-11-2018 IPR010177 Doubled CXXCH motif CDA09_19755 6d0f401dc1652533ae701934d8521c62 321 Pfam PF09699 Doubled CXXCH motif (Paired_CXXCH_1) 136 168 7.4E-6 T 01-11-2018 IPR010177 Doubled CXXCH motif CDA09_19755 6d0f401dc1652533ae701934d8521c62 321 Pfam PF09699 Doubled CXXCH motif (Paired_CXXCH_1) 176 218 4.8E-15 T 01-11-2018 IPR010177 Doubled CXXCH motif CDA09_19755 6d0f401dc1652533ae701934d8521c62 321 TIGRFAM TIGR03508 decahem_SO: decaheme c-type cytochrome, DmsE family 36 310 1.0E-85 T 01-11-2018 IPR020015 Decaheme cytochrome, c-type, DmsE CDA09_19755 6d0f401dc1652533ae701934d8521c62 321 Gene3D G3DSA:3.90.10.10 46 143 1.5E-5 T 01-11-2018 CDA09_20100 ebf69620f0e36aec92311ac93af525a0 324 SUPERFAMILY SSF53800 6 273 4.09E-28 T 01-11-2018 CDA09_20100 ebf69620f0e36aec92311ac93af525a0 324 Pfam PF01903 CbiX 139 242 3.2E-16 T 01-11-2018 IPR002762 Cobalamin (vitamin B12) biosynthesis CbiX GO:0009236|GO:0016852 KEGG: 00860+4.99.1.3|MetaCyc: PWY-7377 CDA09_20100 ebf69620f0e36aec92311ac93af525a0 324 Pfam PF01903 CbiX 11 113 8.6E-20 T 01-11-2018 IPR002762 Cobalamin (vitamin B12) biosynthesis CbiX GO:0009236|GO:0016852 KEGG: 00860+4.99.1.3|MetaCyc: PWY-7377 CDA09_20100 ebf69620f0e36aec92311ac93af525a0 324 Gene3D G3DSA:3.40.50.1400 130 252 2.8E-17 T 01-11-2018 CDA09_20100 ebf69620f0e36aec92311ac93af525a0 324 Gene3D G3DSA:3.40.50.1400 3 123 3.3E-24 T 01-11-2018 CDA09_08065 2a1eeac775282d01e43da4370e790f82 300 SUPERFAMILY SSF81343 115 293 4.05E-9 T 01-11-2018 IPR034804 Fumarate reductase/succinate dehydrogenase, transmembrane subunit GO:0016020 Reactome: R-HSA-611105|Reactome: R-HSA-71403 CDA09_08065 2a1eeac775282d01e43da4370e790f82 300 Gene3D G3DSA:1.20.1300.10 102 300 9.0E-8 T 01-11-2018 IPR034804 Fumarate reductase/succinate dehydrogenase, transmembrane subunit GO:0016020 Reactome: R-HSA-611105|Reactome: R-HSA-71403 CDA09_22525 c0b4d3aec8fc27fd39cfff25b8019d33 329 SMART SM00448 120 233 1.7E-21 T 01-11-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 CDA09_22525 c0b4d3aec8fc27fd39cfff25b8019d33 329 Gene3D G3DSA:3.40.50.12740 120 328 1.4E-58 T 01-11-2018 CDA09_22525 c0b4d3aec8fc27fd39cfff25b8019d33 329 ProSitePatterns PS00622 LuxR-type HTH domain signature. 283 310 - T 01-11-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 CDA09_22525 c0b4d3aec8fc27fd39cfff25b8019d33 329 Pfam PF00196 Bacterial regulatory proteins, luxR family 268 323 1.6E-19 T 01-11-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 CDA09_22525 c0b4d3aec8fc27fd39cfff25b8019d33 329 SUPERFAMILY SSF52172 119 245 9.96E-28 T 01-11-2018 IPR011006 CheY-like superfamily CDA09_22525 c0b4d3aec8fc27fd39cfff25b8019d33 329 SUPERFAMILY SSF46894 259 328 5.44E-22 T 01-11-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 CDA09_22525 c0b4d3aec8fc27fd39cfff25b8019d33 329 Pfam PF00072 Response regulator receiver domain 122 233 4.2E-23 T 01-11-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 CDA09_22525 c0b4d3aec8fc27fd39cfff25b8019d33 329 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 299 311 7.1E-13 T 01-11-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 CDA09_22525 c0b4d3aec8fc27fd39cfff25b8019d33 329 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 283 299 7.1E-13 T 01-11-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 CDA09_22525 c0b4d3aec8fc27fd39cfff25b8019d33 329 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 269 283 7.1E-13 T 01-11-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 CDA09_22525 c0b4d3aec8fc27fd39cfff25b8019d33 329 SMART SM00421 266 323 4.8E-24 T 01-11-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 CDA09_04035 25f5cb61e2da2d4d7205596c955696dc 284 Hamap MF_00061 Putative 4-diphosphocytidyl-2-C-methyl-D-erythritol kinase [ispE]. 10 276 31.969 T 01-11-2018 IPR004424 4-diphosphocytidyl-2C-methyl-D-erythritol kinase GO:0016114|GO:0050515 KEGG: 00900+2.7.1.148|MetaCyc: PWY-7560 CDA09_04035 25f5cb61e2da2d4d7205596c955696dc 284 Gene3D G3DSA:3.30.70.890 166 283 1.1E-30 T 01-11-2018 IPR036554 GHMP kinase, C-terminal domain superfamily CDA09_04035 25f5cb61e2da2d4d7205596c955696dc 284 TIGRFAM TIGR00154 ispE: 4-(cytidine 5'-diphospho)-2-C-methyl-D-erythritol kinase 12 279 1.7E-77 T 01-11-2018 IPR004424 4-diphosphocytidyl-2C-methyl-D-erythritol kinase GO:0016114|GO:0050515 KEGG: 00900+2.7.1.148|MetaCyc: PWY-7560 CDA09_04035 25f5cb61e2da2d4d7205596c955696dc 284 Pfam PF00288 GHMP kinases N terminal domain 92 149 2.3E-10 T 01-11-2018 IPR006204 GHMP kinase N-terminal domain GO:0005524 CDA09_04035 25f5cb61e2da2d4d7205596c955696dc 284 Gene3D G3DSA:3.30.230.10 5 164 1.9E-51 T 01-11-2018 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup CDA09_04035 25f5cb61e2da2d4d7205596c955696dc 284 PIRSF PIRSF010376 8 284 2.5E-85 T 01-11-2018 IPR004424 4-diphosphocytidyl-2C-methyl-D-erythritol kinase GO:0016114|GO:0050515 KEGG: 00900+2.7.1.148|MetaCyc: PWY-7560 CDA09_04035 25f5cb61e2da2d4d7205596c955696dc 284 SUPERFAMILY SSF54211 12 162 9.87E-43 T 01-11-2018 IPR020568 Ribosomal protein S5 domain 2-type fold CDA09_04035 25f5cb61e2da2d4d7205596c955696dc 284 SUPERFAMILY SSF55060 166 282 8.63E-34 T 01-11-2018 IPR036554 GHMP kinase, C-terminal domain superfamily CDA09_04035 25f5cb61e2da2d4d7205596c955696dc 284 Pfam PF08544 GHMP kinases C terminal 215 259 9.6E-5 T 01-11-2018 IPR013750 GHMP kinase, C-terminal domain CDA09_14925 1c3feeeaa87cde719cf1c6486c2f7b73 386 TIGRFAM TIGR01246 dapE_proteo: succinyl-diaminopimelate desuccinylase 10 377 6.0E-165 T 01-11-2018 IPR005941 Succinyl-diaminopimelate desuccinylase, proteobacteria GO:0009014|GO:0009089 KEGG: 00300+3.5.1.18 CDA09_14925 1c3feeeaa87cde719cf1c6486c2f7b73 386 Pfam PF01546 Peptidase family M20/M25/M40 67 376 2.3E-43 T 01-11-2018 IPR002933 Peptidase M20 GO:0016787 CDA09_14925 1c3feeeaa87cde719cf1c6486c2f7b73 386 Gene3D G3DSA:3.40.630.10 12 366 2.1E-130 T 01-11-2018 CDA09_14925 1c3feeeaa87cde719cf1c6486c2f7b73 386 SUPERFAMILY SSF53187 7 379 7.14E-64 T 01-11-2018 CDA09_14925 1c3feeeaa87cde719cf1c6486c2f7b73 386 Gene3D G3DSA:3.30.70.360 184 297 2.1E-130 T 01-11-2018 CDA09_14925 1c3feeeaa87cde719cf1c6486c2f7b73 386 Pfam PF07687 Peptidase dimerisation domain 180 287 1.3E-26 T 01-11-2018 IPR011650 Peptidase M20, dimerisation domain CDA09_14925 1c3feeeaa87cde719cf1c6486c2f7b73 386 Hamap MF_01690 Succinyl-diaminopimelate desuccinylase [dapE]. 7 380 52.481 T 01-11-2018 IPR005941 Succinyl-diaminopimelate desuccinylase, proteobacteria GO:0009014|GO:0009089 KEGG: 00300+3.5.1.18 CDA09_14925 1c3feeeaa87cde719cf1c6486c2f7b73 386 SUPERFAMILY SSF55031 184 293 4.34E-30 T 01-11-2018 IPR036264 Bacterial exopeptidase dimerisation domain CDA09_12560 39cb50956fe22aaebf4c2d96d8aa0298 417 Pfam PF12704 MacB-like periplasmic core domain 29 243 6.6E-19 T 01-11-2018 IPR025857 MacB-like periplasmic core domain CDA09_12560 39cb50956fe22aaebf4c2d96d8aa0298 417 TIGRFAM TIGR02212 lolCE: lipoprotein releasing system, transmembrane protein, LolC/E family 3 417 8.8E-148 T 01-11-2018 IPR011925 Lipoprotein-releasing system transmembrane protein LolC/E GO:0016021|GO:0042953|GO:0042954 CDA09_12560 39cb50956fe22aaebf4c2d96d8aa0298 417 Pfam PF02687 FtsX-like permease family 304 410 5.5E-13 T 01-11-2018 IPR003838 ABC transporter permease protein domain GO:0016020 CDA09_01775 1cf8b72d87f54968a953b44fc31a1db6 435 SUPERFAMILY SSF53383 6 433 2.2E-114 T 01-11-2018 IPR015424 Pyridoxal phosphate-dependent transferase CDA09_01775 1cf8b72d87f54968a953b44fc31a1db6 435 Gene3D G3DSA:3.40.640.10 56 337 4.9E-142 T 01-11-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 CDA09_01775 1cf8b72d87f54968a953b44fc31a1db6 435 Pfam PF00202 Aminotransferase class-III 21 431 2.5E-88 T 01-11-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 CDA09_01775 1cf8b72d87f54968a953b44fc31a1db6 435 ProSitePatterns PS00600 Aminotransferases class-III pyridoxal-phosphate attachment site. 245 282 - T 01-11-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 CDA09_01775 1cf8b72d87f54968a953b44fc31a1db6 435 Gene3D G3DSA:3.90.1150.10 20 426 4.9E-142 T 01-11-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 CDA09_06925 11f8604ab30d4a487414266dff655f9e 212 Pfam PF00196 Bacterial regulatory proteins, luxR family 147 200 3.7E-22 T 01-11-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 CDA09_06925 11f8604ab30d4a487414266dff655f9e 212 SMART SM00421 145 202 1.6E-20 T 01-11-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 CDA09_06925 11f8604ab30d4a487414266dff655f9e 212 Gene3D G3DSA:1.10.10.10 139 203 1.5E-20 T 01-11-2018 IPR036388 Winged helix-like DNA-binding domain superfamily CDA09_06925 11f8604ab30d4a487414266dff655f9e 212 SMART SM00448 10 121 5.3E-28 T 01-11-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 CDA09_06925 11f8604ab30d4a487414266dff655f9e 212 SUPERFAMILY SSF52172 11 161 6.12E-33 T 01-11-2018 IPR011006 CheY-like superfamily CDA09_06925 11f8604ab30d4a487414266dff655f9e 212 Pfam PF00072 Response regulator receiver domain 12 120 2.4E-27 T 01-11-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 CDA09_06925 11f8604ab30d4a487414266dff655f9e 212 Gene3D G3DSA:3.40.50.2300 5 137 5.9E-50 T 01-11-2018 CDA09_06925 11f8604ab30d4a487414266dff655f9e 212 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 148 162 1.5E-13 T 01-11-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 CDA09_06925 11f8604ab30d4a487414266dff655f9e 212 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 162 178 1.5E-13 T 01-11-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 CDA09_06925 11f8604ab30d4a487414266dff655f9e 212 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 178 190 1.5E-13 T 01-11-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 CDA09_06925 11f8604ab30d4a487414266dff655f9e 212 SUPERFAMILY SSF46894 144 202 3.8E-17 T 01-11-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 CDA09_06925 11f8604ab30d4a487414266dff655f9e 212 ProSitePatterns PS00622 LuxR-type HTH domain signature. 162 189 - T 01-11-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 CDA09_07680 7d7b519556bf1e2cc3634838ab2a7783 543 SUPERFAMILY SSF103473 17 398 9.81E-49 T 01-11-2018 IPR036259 MFS transporter superfamily CDA09_07680 7d7b519556bf1e2cc3634838ab2a7783 543 Gene3D G3DSA:1.20.1250.20 12 399 6.3E-40 T 01-11-2018 CDA09_07680 7d7b519556bf1e2cc3634838ab2a7783 543 Pfam PF05977 Transmembrane secretion effector 10 528 2.8E-155 T 01-11-2018 IPR010290 Transmembrane secretion effector CDA09_05725 b5bf77a684380b330f151f693db29e11 322 SUPERFAMILY SSF50341 16 162 1.12E-29 T 01-11-2018 IPR036061 CheW-like domain superfamily GO:0006935|GO:0007165 CDA09_05725 b5bf77a684380b330f151f693db29e11 322 SMART SM00448 183 308 8.3E-15 T 01-11-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 CDA09_05725 b5bf77a684380b330f151f693db29e11 322 Gene3D G3DSA:3.40.50.2300 178 322 2.5E-25 T 01-11-2018 CDA09_05725 b5bf77a684380b330f151f693db29e11 322 Pfam PF01584 CheW-like domain 22 162 5.0E-34 T 01-11-2018 IPR002545 CheW-like domain GO:0006935|GO:0007165 CDA09_05725 b5bf77a684380b330f151f693db29e11 322 Gene3D G3DSA:2.30.30.40 36 154 1.9E-28 T 01-11-2018 CDA09_05725 b5bf77a684380b330f151f693db29e11 322 Pfam PF00072 Response regulator receiver domain 186 308 5.1E-13 T 01-11-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 CDA09_05725 b5bf77a684380b330f151f693db29e11 322 SMART SM00260 17 160 1.8E-28 T 01-11-2018 IPR002545 CheW-like domain GO:0006935|GO:0007165 CDA09_05725 b5bf77a684380b330f151f693db29e11 322 PIRSF PIRSF002867 1 316 9.2E-101 T 01-11-2018 IPR024181 Chemotaxis response regulator CheV CDA09_05725 b5bf77a684380b330f151f693db29e11 322 SUPERFAMILY SSF52172 181 317 2.13E-24 T 01-11-2018 IPR011006 CheY-like superfamily CDA09_05725 b5bf77a684380b330f151f693db29e11 322 Gene3D G3DSA:2.40.50.180 45 160 1.9E-28 T 01-11-2018 CDA09_05440 24527d6960e8b8563d706e6ea15f4e20 894 Gene3D G3DSA:1.20.120.330 258 412 1.3E-57 T 01-11-2018 CDA09_05440 24527d6960e8b8563d706e6ea15f4e20 894 SUPERFAMILY SSF81593 764 891 4.39E-29 T 01-11-2018 CDA09_05440 24527d6960e8b8563d706e6ea15f4e20 894 SUPERFAMILY SSF81301 9 259 1.39E-71 T 01-11-2018 CDA09_05440 24527d6960e8b8563d706e6ea15f4e20 894 Pfam PF08335 GlnD PII-uridylyltransferase 270 409 4.7E-48 T 01-11-2018 IPR013546 PII-uridylyltransferase/Glutamine-synthetase adenylyltransferase GO:0016779 CDA09_05440 24527d6960e8b8563d706e6ea15f4e20 894 Pfam PF08335 GlnD PII-uridylyltransferase 776 862 1.2E-6 T 01-11-2018 IPR013546 PII-uridylyltransferase/Glutamine-synthetase adenylyltransferase GO:0016779 CDA09_05440 24527d6960e8b8563d706e6ea15f4e20 894 Gene3D G3DSA:1.20.120.330 761 893 3.9E-37 T 01-11-2018 CDA09_05440 24527d6960e8b8563d706e6ea15f4e20 894 Gene3D G3DSA:3.30.460.100 529 760 1.6E-74 T 01-11-2018 CDA09_05440 24527d6960e8b8563d706e6ea15f4e20 894 Gene3D G3DSA:3.30.460.100 14 253 1.1E-65 T 01-11-2018 CDA09_05440 24527d6960e8b8563d706e6ea15f4e20 894 SUPERFAMILY SSF81593 260 410 6.83E-45 T 01-11-2018 CDA09_05440 24527d6960e8b8563d706e6ea15f4e20 894 Pfam PF03710 Glutamate-ammonia ligase adenylyltransferase 520 754 3.0E-68 T 01-11-2018 IPR005190 Glutamate-ammonia ligase adenylyltransferase, repeated domain GO:0008882 CDA09_05440 24527d6960e8b8563d706e6ea15f4e20 894 Pfam PF03710 Glutamate-ammonia ligase adenylyltransferase 12 244 1.1E-63 T 01-11-2018 IPR005190 Glutamate-ammonia ligase adenylyltransferase, repeated domain GO:0008882 CDA09_05440 24527d6960e8b8563d706e6ea15f4e20 894 Hamap MF_00802 Bifunctional glutamine synthetase adenylyltransferase/adenylyl-removing enzyme [glnE]. 7 893 19.232 T 01-11-2018 IPR023057 Bifunctional glutamine synthetase adenylyltransferase/adenylyl-removing enzyme GO:0008882 CDA09_05440 24527d6960e8b8563d706e6ea15f4e20 894 SUPERFAMILY SSF81301 493 764 3.92E-77 T 01-11-2018 CDA09_05440 24527d6960e8b8563d706e6ea15f4e20 894 Gene3D G3DSA:1.20.120.1510 417 528 7.6E-22 T 01-11-2018 CDA09_14970 95f4271018643ab6ee08e2f632fd23bf 383 SUPERFAMILY SSF53383 4 371 5.03E-95 T 01-11-2018 IPR015424 Pyridoxal phosphate-dependent transferase CDA09_14970 95f4271018643ab6ee08e2f632fd23bf 383 PIRSF PIRSF005572 3 377 6.8E-127 T 01-11-2018 IPR016454 Cysteine desulfurase KEGG: 00730+2.8.1.7|MetaCyc: PWY-7250 CDA09_14970 95f4271018643ab6ee08e2f632fd23bf 383 Gene3D G3DSA:3.90.1150.10 5 365 2.8E-131 T 01-11-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 CDA09_14970 95f4271018643ab6ee08e2f632fd23bf 383 Gene3D G3DSA:1.10.260.50 16 277 2.8E-131 T 01-11-2018 CDA09_14970 95f4271018643ab6ee08e2f632fd23bf 383 Pfam PF00266 Aminotransferase class-V 5 362 1.4E-66 T 01-11-2018 IPR000192 Aminotransferase class V domain CDA09_14970 95f4271018643ab6ee08e2f632fd23bf 383 Gene3D G3DSA:3.40.640.10 62 234 2.8E-131 T 01-11-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 CDA09_13925 d460e0c5dfc56ffd38d7198fb7566a3a 648 SMART SM00052 385 630 1.9E-100 T 01-11-2018 IPR001633 EAL domain CDA09_13925 d460e0c5dfc56ffd38d7198fb7566a3a 648 SUPERFAMILY SSF55781 20 199 4.8E-22 T 01-11-2018 CDA09_13925 d460e0c5dfc56ffd38d7198fb7566a3a 648 Gene3D G3DSA:3.30.450.40 21 207 3.4E-25 T 01-11-2018 IPR029016 GAF-like domain superfamily CDA09_13925 d460e0c5dfc56ffd38d7198fb7566a3a 648 Gene3D G3DSA:3.30.70.270 208 377 1.3E-39 T 01-11-2018 CDA09_13925 d460e0c5dfc56ffd38d7198fb7566a3a 648 SUPERFAMILY SSF141868 391 636 1.57E-80 T 01-11-2018 IPR035919 EAL domain superfamily CDA09_13925 d460e0c5dfc56ffd38d7198fb7566a3a 648 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 214 373 7.2E-26 T 01-11-2018 IPR000160 GGDEF domain CDA09_13925 d460e0c5dfc56ffd38d7198fb7566a3a 648 SMART SM00267 206 376 3.5E-37 T 01-11-2018 IPR000160 GGDEF domain CDA09_13925 d460e0c5dfc56ffd38d7198fb7566a3a 648 Pfam PF13185 GAF domain 47 196 2.8E-19 T 01-11-2018 IPR003018 GAF domain GO:0005515 CDA09_13925 d460e0c5dfc56ffd38d7198fb7566a3a 648 Pfam PF00563 EAL domain 391 625 1.7E-66 T 01-11-2018 IPR001633 EAL domain CDA09_13925 d460e0c5dfc56ffd38d7198fb7566a3a 648 SMART SM00065 48 207 1.8E-4 T 01-11-2018 IPR003018 GAF domain GO:0005515 CDA09_13925 d460e0c5dfc56ffd38d7198fb7566a3a 648 Pfam PF00990 Diguanylate cyclase, GGDEF domain 217 371 3.2E-31 T 01-11-2018 IPR000160 GGDEF domain CDA09_13925 d460e0c5dfc56ffd38d7198fb7566a3a 648 SUPERFAMILY SSF55073 222 375 3.06E-33 T 01-11-2018 IPR029787 Nucleotide cyclase CDA09_13925 d460e0c5dfc56ffd38d7198fb7566a3a 648 Gene3D G3DSA:3.20.20.450 386 638 2.6E-89 T 01-11-2018 IPR035919 EAL domain superfamily CDA09_02475 9f8f20ec407e8f0635adad328ec86788 156 Gene3D G3DSA:3.40.1280.10 1 156 4.2E-46 T 01-11-2018 IPR029026 tRNA (guanine-N1-)-methyltransferase, N-terminal CDA09_02475 9f8f20ec407e8f0635adad328ec86788 156 Pfam PF02590 Predicted SPOUT methyltransferase 2 154 1.6E-43 T 01-11-2018 IPR003742 RNA methyltransferase RlmH GO:0005737|GO:0006364|GO:0008168 CDA09_02475 9f8f20ec407e8f0635adad328ec86788 156 Hamap MF_00658 Ribosomal RNA large subunit methyltransferase H [rlmH]. 1 155 26.433 T 01-11-2018 IPR003742 RNA methyltransferase RlmH GO:0005737|GO:0006364|GO:0008168 CDA09_02475 9f8f20ec407e8f0635adad328ec86788 156 SUPERFAMILY SSF75217 2 153 8.37E-44 T 01-11-2018 IPR029028 Alpha/beta knot methyltransferases CDA09_02475 9f8f20ec407e8f0635adad328ec86788 156 PIRSF PIRSF004505 1 155 8.0E-39 T 01-11-2018 IPR003742 RNA methyltransferase RlmH GO:0005737|GO:0006364|GO:0008168 CDA09_02475 9f8f20ec407e8f0635adad328ec86788 156 TIGRFAM TIGR00246 tRNA_RlmH_YbeA: rRNA large subunit m3Psi methyltransferase RlmH 1 156 3.9E-45 T 01-11-2018 IPR003742 RNA methyltransferase RlmH GO:0005737|GO:0006364|GO:0008168 CDA09_08945 9c265007fe0f9af7d2b42fdb4041052f 123 Gene3D G3DSA:3.40.50.12740 1 123 4.6E-45 T 01-11-2018 CDA09_08945 9c265007fe0f9af7d2b42fdb4041052f 123 SMART SM00448 3 116 7.8E-41 T 01-11-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 CDA09_08945 9c265007fe0f9af7d2b42fdb4041052f 123 SUPERFAMILY SSF52172 3 121 8.11E-39 T 01-11-2018 IPR011006 CheY-like superfamily CDA09_08945 9c265007fe0f9af7d2b42fdb4041052f 123 Pfam PF00072 Response regulator receiver domain 5 117 3.7E-28 T 01-11-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 CDA09_06515 e4319bbcca7f179bc1f917dcf988f4b8 281 Gene3D G3DSA:1.10.443.10 94 276 3.1E-49 T 01-11-2018 IPR013762 Integrase-like, catalytic domain superfamily GO:0003677|GO:0006310|GO:0015074 CDA09_06515 e4319bbcca7f179bc1f917dcf988f4b8 281 Pfam PF13495 Phage integrase, N-terminal SAM-like domain 4 85 4.3E-19 T 01-11-2018 IPR004107 Integrase, SAM-like, N-terminal GO:0003677|GO:0015074 CDA09_06515 e4319bbcca7f179bc1f917dcf988f4b8 281 SUPERFAMILY SSF56349 10 265 1.32E-51 T 01-11-2018 IPR011010 DNA breaking-rejoining enzyme, catalytic core GO:0003677 CDA09_06515 e4319bbcca7f179bc1f917dcf988f4b8 281 Gene3D G3DSA:1.10.150.130 2 88 5.4E-18 T 01-11-2018 IPR010998 Integrase/recombinase, N-terminal CDA09_06515 e4319bbcca7f179bc1f917dcf988f4b8 281 Pfam PF00589 Phage integrase family 102 264 8.9E-36 T 01-11-2018 IPR002104 Integrase, catalytic domain GO:0003677|GO:0006310|GO:0015074 CDA09_15595 e4319bbcca7f179bc1f917dcf988f4b8 281 Gene3D G3DSA:1.10.443.10 94 276 3.1E-49 T 01-11-2018 IPR013762 Integrase-like, catalytic domain superfamily GO:0003677|GO:0006310|GO:0015074 CDA09_15595 e4319bbcca7f179bc1f917dcf988f4b8 281 Pfam PF13495 Phage integrase, N-terminal SAM-like domain 4 85 4.3E-19 T 01-11-2018 IPR004107 Integrase, SAM-like, N-terminal GO:0003677|GO:0015074 CDA09_15595 e4319bbcca7f179bc1f917dcf988f4b8 281 SUPERFAMILY SSF56349 10 265 1.32E-51 T 01-11-2018 IPR011010 DNA breaking-rejoining enzyme, catalytic core GO:0003677 CDA09_15595 e4319bbcca7f179bc1f917dcf988f4b8 281 Gene3D G3DSA:1.10.150.130 2 88 5.4E-18 T 01-11-2018 IPR010998 Integrase/recombinase, N-terminal CDA09_15595 e4319bbcca7f179bc1f917dcf988f4b8 281 Pfam PF00589 Phage integrase family 102 264 8.9E-36 T 01-11-2018 IPR002104 Integrase, catalytic domain GO:0003677|GO:0006310|GO:0015074 CDA09_14270 5ab1ce5cf0ec299eb73c329961ab1978 699 SUPERFAMILY SSF50249 621 696 1.86E-20 T 01-11-2018 IPR012340 Nucleic acid-binding, OB-fold CDA09_14270 5ab1ce5cf0ec299eb73c329961ab1978 699 Hamap MF_01595 Polyribonucleotide nucleotidyltransferase [pnp]. 3 694 30.282 T 01-11-2018 IPR012162 Polyribonucleotide nucleotidyltransferase GO:0003723|GO:0004654|GO:0006402 KEGG: 00230+2.7.7.8|KEGG: 00240+2.7.7.8 CDA09_14270 5ab1ce5cf0ec299eb73c329961ab1978 699 Pfam PF03725 3' exoribonuclease family, domain 2 147 205 2.4E-11 T 01-11-2018 IPR015847 Exoribonuclease, phosphorolytic domain 2 Reactome: R-HSA-380994|Reactome: R-HSA-429958|Reactome: R-HSA-450385|Reactome: R-HSA-450513|Reactome: R-HSA-450604|Reactome: R-HSA-6791226 CDA09_14270 5ab1ce5cf0ec299eb73c329961ab1978 699 SUPERFAMILY SSF54211 292 489 3.59E-48 T 01-11-2018 IPR020568 Ribosomal protein S5 domain 2-type fold CDA09_14270 5ab1ce5cf0ec299eb73c329961ab1978 699 Gene3D G3DSA:2.40.50.140 623 695 1.2E-28 T 01-11-2018 CDA09_14270 5ab1ce5cf0ec299eb73c329961ab1978 699 SUPERFAMILY SSF54211 4 144 7.09E-52 T 01-11-2018 IPR020568 Ribosomal protein S5 domain 2-type fold CDA09_14270 5ab1ce5cf0ec299eb73c329961ab1978 699 PIRSF PIRSF005499 2 699 2.6E-297 T 01-11-2018 IPR012162 Polyribonucleotide nucleotidyltransferase GO:0003723|GO:0004654|GO:0006402 KEGG: 00230+2.7.7.8|KEGG: 00240+2.7.7.8 CDA09_14270 5ab1ce5cf0ec299eb73c329961ab1978 699 SUPERFAMILY SSF54791 555 641 5.31E-22 T 01-11-2018 IPR036612 K Homology domain, type 1 superfamily GO:0003723 CDA09_14270 5ab1ce5cf0ec299eb73c329961ab1978 699 Pfam PF03726 Polyribonucleotide nucleotidyltransferase, RNA binding domain 242 321 8.3E-21 T 01-11-2018 IPR015848 Polyribonucleotide nucleotidyltransferase, RNA-binding domain GO:0003723|GO:0006396 KEGG: 00230+2.7.7.8|KEGG: 00240+2.7.7.8 CDA09_14270 5ab1ce5cf0ec299eb73c329961ab1978 699 Gene3D G3DSA:3.30.230.70 233 550 4.3E-117 T 01-11-2018 IPR027408 PNPase/RNase PH domain superfamily Reactome: R-HSA-380994|Reactome: R-HSA-429958|Reactome: R-HSA-450385|Reactome: R-HSA-450513|Reactome: R-HSA-450604|Reactome: R-HSA-6791226 CDA09_14270 5ab1ce5cf0ec299eb73c329961ab1978 699 Pfam PF00575 S1 RNA binding domain 620 691 1.0E-16 T 01-11-2018 IPR003029 S1 domain GO:0003676 CDA09_14270 5ab1ce5cf0ec299eb73c329961ab1978 699 Gene3D G3DSA:3.30.230.70 3 229 2.2E-81 T 01-11-2018 IPR027408 PNPase/RNase PH domain superfamily Reactome: R-HSA-380994|Reactome: R-HSA-429958|Reactome: R-HSA-450385|Reactome: R-HSA-450513|Reactome: R-HSA-450604|Reactome: R-HSA-6791226 CDA09_14270 5ab1ce5cf0ec299eb73c329961ab1978 699 Pfam PF01138 3' exoribonuclease family, domain 1 16 144 1.9E-20 T 01-11-2018 IPR001247 Exoribonuclease, phosphorolytic domain 1 Reactome: R-HSA-380994|Reactome: R-HSA-429958|Reactome: R-HSA-450385|Reactome: R-HSA-450513|Reactome: R-HSA-450604|Reactome: R-HSA-6791226 CDA09_14270 5ab1ce5cf0ec299eb73c329961ab1978 699 Pfam PF01138 3' exoribonuclease family, domain 1 325 457 8.5E-23 T 01-11-2018 IPR001247 Exoribonuclease, phosphorolytic domain 1 Reactome: R-HSA-380994|Reactome: R-HSA-429958|Reactome: R-HSA-450385|Reactome: R-HSA-450513|Reactome: R-HSA-450604|Reactome: R-HSA-6791226 CDA09_14270 5ab1ce5cf0ec299eb73c329961ab1978 699 SUPERFAMILY SSF55666 145 236 5.47E-29 T 01-11-2018 IPR036345 Exoribonuclease, PH domain 2 superfamily Reactome: R-HSA-380994|Reactome: R-HSA-429958|Reactome: R-HSA-450385|Reactome: R-HSA-450513|Reactome: R-HSA-450604|Reactome: R-HSA-6791226 CDA09_14270 5ab1ce5cf0ec299eb73c329961ab1978 699 SMART SM00316 621 691 9.9E-24 T 01-11-2018 IPR022967 RNA-binding domain, S1 CDA09_14270 5ab1ce5cf0ec299eb73c329961ab1978 699 Pfam PF00013 KH domain 557 614 4.4E-11 T 01-11-2018 IPR004088 K Homology domain, type 1 GO:0003723 CDA09_14270 5ab1ce5cf0ec299eb73c329961ab1978 699 Gene3D G3DSA:3.30.1370.10 551 622 6.0E-20 T 01-11-2018 IPR036612 K Homology domain, type 1 superfamily GO:0003723 CDA09_14270 5ab1ce5cf0ec299eb73c329961ab1978 699 SMART SM00322 553 618 3.8E-12 T 01-11-2018 IPR004087 K Homology domain GO:0003676 CDA09_14270 5ab1ce5cf0ec299eb73c329961ab1978 699 TIGRFAM TIGR03591 polynuc_phos: polyribonucleotide nucleotidyltransferase 11 692 0.0 T 01-11-2018 IPR012162 Polyribonucleotide nucleotidyltransferase GO:0003723|GO:0004654|GO:0006402 KEGG: 00230+2.7.7.8|KEGG: 00240+2.7.7.8 CDA09_14270 5ab1ce5cf0ec299eb73c329961ab1978 699 SUPERFAMILY SSF55666 451 549 1.4E-27 T 01-11-2018 IPR036345 Exoribonuclease, PH domain 2 superfamily Reactome: R-HSA-380994|Reactome: R-HSA-429958|Reactome: R-HSA-450385|Reactome: R-HSA-450513|Reactome: R-HSA-450604|Reactome: R-HSA-6791226 CDA09_14770 ae952ed80dcda1f3f9bda05e8ab06d3b 294 Gene3D G3DSA:1.10.10.10 4 95 4.3E-19 T 01-11-2018 IPR036388 Winged helix-like DNA-binding domain superfamily CDA09_14770 ae952ed80dcda1f3f9bda05e8ab06d3b 294 Pfam PF03466 LysR substrate binding domain 90 293 9.7E-30 T 01-11-2018 IPR005119 LysR, substrate-binding CDA09_14770 ae952ed80dcda1f3f9bda05e8ab06d3b 294 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 8 65 2.7E-15 T 01-11-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 CDA09_14770 ae952ed80dcda1f3f9bda05e8ab06d3b 294 SUPERFAMILY SSF46785 4 113 1.16E-19 T 01-11-2018 IPR036390 Winged helix DNA-binding domain superfamily CDA09_14770 ae952ed80dcda1f3f9bda05e8ab06d3b 294 SUPERFAMILY SSF53850 90 293 1.9E-37 T 01-11-2018 CDA09_14770 ae952ed80dcda1f3f9bda05e8ab06d3b 294 Gene3D G3DSA:3.40.190.290 96 294 1.2E-33 T 01-11-2018 CDA09_18720 7e3c11efc200eb2f4ad048ae61e0a79c 2037 SUPERFAMILY SSF47226 1299 1405 5.36E-19 T 01-11-2018 IPR036641 HPT domain superfamily GO:0000160 CDA09_18720 7e3c11efc200eb2f4ad048ae61e0a79c 2037 Gene3D G3DSA:2.30.30.40 1755 1882 1.3E-30 T 01-11-2018 CDA09_18720 7e3c11efc200eb2f4ad048ae61e0a79c 2037 Pfam PF01627 Hpt domain 1139 1235 6.2E-9 T 01-11-2018 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160 CDA09_18720 7e3c11efc200eb2f4ad048ae61e0a79c 2037 Pfam PF01627 Hpt domain 692 772 2.4E-13 T 01-11-2018 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160 CDA09_18720 7e3c11efc200eb2f4ad048ae61e0a79c 2037 Pfam PF01627 Hpt domain 1301 1385 3.1E-12 T 01-11-2018 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160 CDA09_18720 7e3c11efc200eb2f4ad048ae61e0a79c 2037 Pfam PF01627 Hpt domain 23 99 8.9E-6 T 01-11-2018 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160 CDA09_18720 7e3c11efc200eb2f4ad048ae61e0a79c 2037 SUPERFAMILY SSF52172 1913 2031 5.12E-37 T 01-11-2018 IPR011006 CheY-like superfamily CDA09_18720 7e3c11efc200eb2f4ad048ae61e0a79c 2037 SUPERFAMILY SSF47226 1138 1252 1.23E-18 T 01-11-2018 IPR036641 HPT domain superfamily GO:0000160 CDA09_18720 7e3c11efc200eb2f4ad048ae61e0a79c 2037 SUPERFAMILY SSF50341 1754 1886 7.59E-23 T 01-11-2018 IPR036061 CheW-like domain superfamily GO:0006935|GO:0007165 CDA09_18720 7e3c11efc200eb2f4ad048ae61e0a79c 2037 PRINTS PR00344 Bacterial sensor protein C-terminal signature 1659 1673 2.0E-8 T 01-11-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 CDA09_18720 7e3c11efc200eb2f4ad048ae61e0a79c 2037 PRINTS PR00344 Bacterial sensor protein C-terminal signature 1715 1733 2.0E-8 T 01-11-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 CDA09_18720 7e3c11efc200eb2f4ad048ae61e0a79c 2037 PRINTS PR00344 Bacterial sensor protein C-terminal signature 1739 1752 2.0E-8 T 01-11-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 CDA09_18720 7e3c11efc200eb2f4ad048ae61e0a79c 2037 SUPERFAMILY SSF55874 1571 1753 5.37E-32 T 01-11-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily CDA09_18720 7e3c11efc200eb2f4ad048ae61e0a79c 2037 Pfam PF00072 Response regulator receiver domain 1915 2026 6.6E-27 T 01-11-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 CDA09_18720 7e3c11efc200eb2f4ad048ae61e0a79c 2037 SMART SM00260 1747 1887 2.0E-16 T 01-11-2018 IPR002545 CheW-like domain GO:0006935|GO:0007165 CDA09_18720 7e3c11efc200eb2f4ad048ae61e0a79c 2037 Gene3D G3DSA:3.40.50.12740 1912 2036 8.0E-38 T 01-11-2018 CDA09_18720 7e3c11efc200eb2f4ad048ae61e0a79c 2037 SUPERFAMILY SSF47226 689 811 1.44E-24 T 01-11-2018 IPR036641 HPT domain superfamily GO:0000160 CDA09_18720 7e3c11efc200eb2f4ad048ae61e0a79c 2037 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 1618 1754 5.5E-12 T 01-11-2018 IPR003594 Histidine kinase/HSP90-like ATPase CDA09_18720 7e3c11efc200eb2f4ad048ae61e0a79c 2037 SMART SM00387 1614 1755 8.1E-18 T 01-11-2018 IPR003594 Histidine kinase/HSP90-like ATPase CDA09_18720 7e3c11efc200eb2f4ad048ae61e0a79c 2037 SUPERFAMILY SSF47226 12 131 2.49E-16 T 01-11-2018 IPR036641 HPT domain superfamily GO:0000160 CDA09_18720 7e3c11efc200eb2f4ad048ae61e0a79c 2037 SMART SM01231 1432 1569 3.6E-7 T 01-11-2018 IPR004105 Histidine kinase CheA-like, homodimeric domain GO:0000155|GO:0000160|GO:0004673|GO:0005737|GO:0006935 CDA09_18720 7e3c11efc200eb2f4ad048ae61e0a79c 2037 Pfam PF01584 CheW-like domain 1759 1888 1.3E-17 T 01-11-2018 IPR002545 CheW-like domain GO:0006935|GO:0007165 CDA09_18720 7e3c11efc200eb2f4ad048ae61e0a79c 2037 SUPERFAMILY SSF47226 446 549 3.24E-5 T 01-11-2018 IPR036641 HPT domain superfamily GO:0000160 CDA09_18720 7e3c11efc200eb2f4ad048ae61e0a79c 2037 SMART SM00448 1913 2026 2.7E-36 T 01-11-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 CDA09_18720 7e3c11efc200eb2f4ad048ae61e0a79c 2037 Gene3D G3DSA:1.20.120.160 684 817 2.5E-22 T 01-11-2018 IPR036641 HPT domain superfamily GO:0000160 CDA09_18720 7e3c11efc200eb2f4ad048ae61e0a79c 2037 Gene3D G3DSA:1.20.120.160 1132 1260 6.8E-14 T 01-11-2018 IPR036641 HPT domain superfamily GO:0000160 CDA09_18720 7e3c11efc200eb2f4ad048ae61e0a79c 2037 Gene3D G3DSA:1.20.120.160 1292 1423 2.0E-19 T 01-11-2018 IPR036641 HPT domain superfamily GO:0000160 CDA09_18720 7e3c11efc200eb2f4ad048ae61e0a79c 2037 SMART SM00073 690 787 1.1E-5 T 01-11-2018 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160 CDA09_18720 7e3c11efc200eb2f4ad048ae61e0a79c 2037 SMART SM00073 1298 1399 7.9E-8 T 01-11-2018 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160 CDA09_18720 7e3c11efc200eb2f4ad048ae61e0a79c 2037 SMART SM00073 1136 1232 0.011 T 01-11-2018 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160 CDA09_18720 7e3c11efc200eb2f4ad048ae61e0a79c 2037 Gene3D G3DSA:3.30.565.10 1568 1754 6.0E-48 T 01-11-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily CDA09_18720 7e3c11efc200eb2f4ad048ae61e0a79c 2037 Gene3D G3DSA:2.40.50.180 1778 1842 1.3E-30 T 01-11-2018 CDA09_01105 3977c58c7215f03b3b485dd392936813 287 PRINTS PR00721 Stomatin signature 131 154 4.6E-29 T 01-11-2018 IPR001972 Stomatin family GO:0016020 CDA09_01105 3977c58c7215f03b3b485dd392936813 287 PRINTS PR00721 Stomatin signature 111 128 4.6E-29 T 01-11-2018 IPR001972 Stomatin family GO:0016020 CDA09_01105 3977c58c7215f03b3b485dd392936813 287 PRINTS PR00721 Stomatin signature 28 50 4.6E-29 T 01-11-2018 IPR001972 Stomatin family GO:0016020 CDA09_01105 3977c58c7215f03b3b485dd392936813 287 PRINTS PR00721 Stomatin signature 76 97 4.6E-29 T 01-11-2018 IPR001972 Stomatin family GO:0016020 CDA09_01105 3977c58c7215f03b3b485dd392936813 287 PRINTS PR00721 Stomatin signature 155 173 4.6E-29 T 01-11-2018 IPR001972 Stomatin family GO:0016020 CDA09_01105 3977c58c7215f03b3b485dd392936813 287 PRINTS PR00721 Stomatin signature 174 195 4.6E-29 T 01-11-2018 IPR001972 Stomatin family GO:0016020 CDA09_01105 3977c58c7215f03b3b485dd392936813 287 SMART SM00244 21 179 2.2E-54 T 01-11-2018 IPR001107 Band 7 domain CDA09_01105 3977c58c7215f03b3b485dd392936813 287 SUPERFAMILY SSF117892 52 185 6.8E-38 T 01-11-2018 IPR036013 Band 7/SPFH domain superfamily CDA09_01105 3977c58c7215f03b3b485dd392936813 287 Pfam PF01145 SPFH domain / Band 7 family 25 196 1.2E-32 T 01-11-2018 IPR001107 Band 7 domain CDA09_01105 3977c58c7215f03b3b485dd392936813 287 Gene3D G3DSA:3.30.479.30 49 181 6.6E-38 T 01-11-2018 CDA09_19045 7fb4480272aefdc496638bcd53f19419 492 SUPERFAMILY SSF55874 301 467 1.44E-37 T 01-11-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily CDA09_19045 7fb4480272aefdc496638bcd53f19419 492 TIGRFAM TIGR01386 cztS_silS_copS: heavy metal sensor kinase 3 462 8.9E-154 T 01-11-2018 IPR006290 Heavy metal sensor kinase GO:0000160|GO:0004673|GO:0016020 CDA09_19045 7fb4480272aefdc496638bcd53f19419 492 SMART SM00387 354 465 1.1E-36 T 01-11-2018 IPR003594 Histidine kinase/HSP90-like ATPase CDA09_19045 7fb4480272aefdc496638bcd53f19419 492 SMART SM00388 245 311 5.7E-14 T 01-11-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 CDA09_19045 7fb4480272aefdc496638bcd53f19419 492 SUPERFAMILY SSF47384 228 311 4.12E-15 T 01-11-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 CDA09_19045 7fb4480272aefdc496638bcd53f19419 492 Gene3D G3DSA:1.10.287.130 195 311 8.0E-22 T 01-11-2018 CDA09_19045 7fb4480272aefdc496638bcd53f19419 492 Gene3D G3DSA:3.30.565.10 317 471 1.6E-37 T 01-11-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily CDA09_19045 7fb4480272aefdc496638bcd53f19419 492 Pfam PF00512 His Kinase A (phospho-acceptor) domain 246 311 5.6E-11 T 01-11-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 CDA09_19045 7fb4480272aefdc496638bcd53f19419 492 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 354 464 3.9E-20 T 01-11-2018 IPR003594 Histidine kinase/HSP90-like ATPase CDA09_19045 7fb4480272aefdc496638bcd53f19419 492 SMART SM00304 191 244 4.2E-6 T 01-11-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 CDA09_19045 7fb4480272aefdc496638bcd53f19419 492 PRINTS PR00344 Bacterial sensor protein C-terminal signature 426 444 1.3E-11 T 01-11-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 CDA09_19045 7fb4480272aefdc496638bcd53f19419 492 PRINTS PR00344 Bacterial sensor protein C-terminal signature 391 405 1.3E-11 T 01-11-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 CDA09_19045 7fb4480272aefdc496638bcd53f19419 492 PRINTS PR00344 Bacterial sensor protein C-terminal signature 409 419 1.3E-11 T 01-11-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 CDA09_19045 7fb4480272aefdc496638bcd53f19419 492 PRINTS PR00344 Bacterial sensor protein C-terminal signature 449 462 1.3E-11 T 01-11-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 CDA09_11095 1577f5ca9518d3aeef45cc245bf9156d 488 Gene3D G3DSA:3.40.1190.10 16 314 3.3E-84 T 01-11-2018 IPR036565 Mur-like, catalytic domain superfamily GO:0005524|GO:0009058 Reactome: R-HSA-196757 CDA09_11095 1577f5ca9518d3aeef45cc245bf9156d 488 TIGRFAM TIGR01499 folC: bifunctional protein FolC 44 445 9.1E-100 T 01-11-2018 IPR001645 Folylpolyglutamate synthetase GO:0004326|GO:0005524|GO:0009396 KEGG: 00790+6.3.2.17|MetaCyc: PWY-2161|Reactome: R-HSA-196757 CDA09_11095 1577f5ca9518d3aeef45cc245bf9156d 488 Gene3D G3DSA:3.90.190.20 317 452 2.0E-24 T 01-11-2018 IPR036615 Mur ligase, C-terminal domain superfamily GO:0005524|GO:0009058|GO:0016874 Reactome: R-HSA-196757 CDA09_11095 1577f5ca9518d3aeef45cc245bf9156d 488 SUPERFAMILY SSF53623 37 313 4.48E-81 T 01-11-2018 IPR036565 Mur-like, catalytic domain superfamily GO:0005524|GO:0009058 Reactome: R-HSA-196757 CDA09_11095 1577f5ca9518d3aeef45cc245bf9156d 488 SUPERFAMILY SSF53244 315 446 2.56E-20 T 01-11-2018 IPR036615 Mur ligase, C-terminal domain superfamily GO:0005524|GO:0009058|GO:0016874 Reactome: R-HSA-196757 CDA09_11095 1577f5ca9518d3aeef45cc245bf9156d 488 Pfam PF08245 Mur ligase middle domain 66 290 3.5E-9 T 01-11-2018 IPR013221 Mur ligase, central GO:0005524|GO:0009058 CDA09_11095 1577f5ca9518d3aeef45cc245bf9156d 488 ProSitePatterns PS01012 Folylpolyglutamate synthase signature 2. 161 176 - T 01-11-2018 IPR018109 Folylpolyglutamate synthetase, conserved site GO:0004326|GO:0005524|GO:0009396 Reactome: R-HSA-196757 CDA09_21150 80ece4aa1cd0b88d57fffbf922637d54 309 SUPERFAMILY SSF52821 186 308 3.8E-20 T 01-11-2018 IPR036873 Rhodanese-like domain superfamily CDA09_21150 80ece4aa1cd0b88d57fffbf922637d54 309 SMART SM00450 210 308 0.0015 T 01-11-2018 IPR001763 Rhodanese-like domain CDA09_21150 80ece4aa1cd0b88d57fffbf922637d54 309 Pfam PF09335 SNARE associated Golgi protein 32 155 2.6E-10 T 01-11-2018 IPR032816 SNARE associated Golgi protein CDA09_21150 80ece4aa1cd0b88d57fffbf922637d54 309 Pfam PF00581 Rhodanese-like domain 212 304 8.1E-5 T 01-11-2018 IPR001763 Rhodanese-like domain CDA09_21150 80ece4aa1cd0b88d57fffbf922637d54 309 Gene3D G3DSA:3.40.250.10 192 309 9.2E-15 T 01-11-2018 IPR036873 Rhodanese-like domain superfamily CDA09_06285 f7b415f664f85d1f774379c3c01e0bfd 220 SMART SM00862 145 216 1.8E-26 T 01-11-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 CDA09_06285 f7b415f664f85d1f774379c3c01e0bfd 220 Gene3D G3DSA:1.10.10.10 124 219 1.2E-29 T 01-11-2018 IPR036388 Winged helix-like DNA-binding domain superfamily CDA09_06285 f7b415f664f85d1f774379c3c01e0bfd 220 Pfam PF00072 Response regulator receiver domain 4 112 7.2E-27 T 01-11-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 CDA09_06285 f7b415f664f85d1f774379c3c01e0bfd 220 SUPERFAMILY SSF52172 1 165 6.88E-40 T 01-11-2018 IPR011006 CheY-like superfamily CDA09_06285 f7b415f664f85d1f774379c3c01e0bfd 220 Pfam PF00486 Transcriptional regulatory protein, C terminal 145 215 5.8E-23 T 01-11-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 CDA09_06285 f7b415f664f85d1f774379c3c01e0bfd 220 SMART SM00448 1 112 7.4E-40 T 01-11-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 CDA09_06285 f7b415f664f85d1f774379c3c01e0bfd 220 Gene3D G3DSA:3.40.50.2300 1 122 8.5E-42 T 01-11-2018 CDA09_06460 6a3e6daaab92c84650bad44acd6b123d 591 TIGRFAM TIGR01504 glyox_carbo_lig: glyoxylate carboligase 2 590 0.0 T 01-11-2018 IPR006397 Glyoxylate carboligase GO:0009028|GO:0009436 KEGG: 00630+4.1.1.47 CDA09_06460 6a3e6daaab92c84650bad44acd6b123d 591 SUPERFAMILY SSF52518 1 184 1.18E-50 T 01-11-2018 IPR029061 Thiamin diphosphate-binding fold CDA09_06460 6a3e6daaab92c84650bad44acd6b123d 591 SUPERFAMILY SSF52518 369 566 9.03E-51 T 01-11-2018 IPR029061 Thiamin diphosphate-binding fold CDA09_06460 6a3e6daaab92c84650bad44acd6b123d 591 Gene3D G3DSA:3.40.50.970 2 171 4.2E-68 T 01-11-2018 CDA09_06460 6a3e6daaab92c84650bad44acd6b123d 591 Gene3D G3DSA:3.40.50.1220 193 358 3.6E-48 T 01-11-2018 CDA09_06460 6a3e6daaab92c84650bad44acd6b123d 591 Pfam PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain 4 172 2.1E-53 T 01-11-2018 IPR012001 Thiamine pyrophosphate enzyme, N-terminal TPP-binding domain GO:0030976 CDA09_06460 6a3e6daaab92c84650bad44acd6b123d 591 SUPERFAMILY SSF52467 161 350 4.62E-47 T 01-11-2018 IPR029035 DHS-like NAD/FAD-binding domain superfamily CDA09_06460 6a3e6daaab92c84650bad44acd6b123d 591 Pfam PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain 393 553 5.5E-33 T 01-11-2018 IPR011766 Thiamine pyrophosphate enzyme, C-terminal TPP-binding GO:0003824|GO:0030976 CDA09_06460 6a3e6daaab92c84650bad44acd6b123d 591 Pfam PF00205 Thiamine pyrophosphate enzyme, central domain 194 329 3.6E-35 T 01-11-2018 IPR012000 Thiamine pyrophosphate enzyme, central domain GO:0000287|GO:0030976 CDA09_06460 6a3e6daaab92c84650bad44acd6b123d 591 Gene3D G3DSA:3.40.50.970 359 582 6.4E-66 T 01-11-2018 CDA09_13445 9f4fb6ba5ebd6b84eac92a979dbe918a 793 Gene3D G3DSA:3.40.50.150 538 787 9.9E-23 T 01-11-2018 CDA09_13445 9f4fb6ba5ebd6b84eac92a979dbe918a 793 Gene3D G3DSA:3.90.1580.10 241 527 5.0E-27 T 01-11-2018 CDA09_13445 9f4fb6ba5ebd6b84eac92a979dbe918a 793 SUPERFAMILY SSF56436 249 518 2.02E-53 T 01-11-2018 IPR016187 C-type lectin fold CDA09_13445 9f4fb6ba5ebd6b84eac92a979dbe918a 793 TIGRFAM TIGR04344 ovoA_Nterm: 5-histidylcysteine sulfoxide synthase 54 518 6.3E-187 T 01-11-2018 IPR027577 5-histidylcysteine sulfoxide synthase CDA09_13445 9f4fb6ba5ebd6b84eac92a979dbe918a 793 TIGRFAM TIGR04345 ovoA_Cterm: putative 4-mercaptohistidine N1-methyltranferase 539 791 3.4E-70 T 01-11-2018 IPR027625 Putative 4-mercaptohistidine N1-methyltranferase, OvoA C-terminal domain CDA09_13445 9f4fb6ba5ebd6b84eac92a979dbe918a 793 Pfam PF03781 Sulfatase-modifying factor enzyme 1 254 518 4.6E-27 T 01-11-2018 IPR005532 Sulfatase-modifying factor enzyme Reactome: R-HSA-1660662|Reactome: R-HSA-1663150 CDA09_13445 9f4fb6ba5ebd6b84eac92a979dbe918a 793 Pfam PF08241 Methyltransferase domain 595 701 6.4E-7 T 01-11-2018 IPR013216 Methyltransferase type 11 GO:0008168 CDA09_13445 9f4fb6ba5ebd6b84eac92a979dbe918a 793 SUPERFAMILY SSF53335 580 774 7.84E-21 T 01-11-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase CDA09_20705 b10a28925d538b21faa53cb07022bc97 599 SUPERFAMILY SSF47384 326 364 8.44E-5 T 01-11-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 CDA09_20705 b10a28925d538b21faa53cb07022bc97 599 SMART SM00387 483 591 2.7E-34 T 01-11-2018 IPR003594 Histidine kinase/HSP90-like ATPase CDA09_20705 b10a28925d538b21faa53cb07022bc97 599 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 485 590 9.0E-24 T 01-11-2018 IPR003594 Histidine kinase/HSP90-like ATPase CDA09_20705 b10a28925d538b21faa53cb07022bc97 599 PRINTS PR00344 Bacterial sensor protein C-terminal signature 520 534 2.3E-18 T 01-11-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 CDA09_20705 b10a28925d538b21faa53cb07022bc97 599 PRINTS PR00344 Bacterial sensor protein C-terminal signature 551 569 2.3E-18 T 01-11-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 CDA09_20705 b10a28925d538b21faa53cb07022bc97 599 PRINTS PR00344 Bacterial sensor protein C-terminal signature 538 548 2.3E-18 T 01-11-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 CDA09_20705 b10a28925d538b21faa53cb07022bc97 599 PRINTS PR00344 Bacterial sensor protein C-terminal signature 575 588 2.3E-18 T 01-11-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 CDA09_20705 b10a28925d538b21faa53cb07022bc97 599 Gene3D G3DSA:3.30.565.10 445 594 7.4E-46 T 01-11-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily CDA09_20705 b10a28925d538b21faa53cb07022bc97 599 SUPERFAMILY SSF55874 434 591 3.01E-44 T 01-11-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily CDA09_20705 b10a28925d538b21faa53cb07022bc97 599 Pfam PF00512 His Kinase A (phospho-acceptor) domain 334 442 2.3E-9 T 01-11-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 CDA09_00560 d3f18a8a0c7425f650fe41cbac6c8742 487 Hamap MF_00120 Glutamyl-tRNA(Gln) amidotransferase subunit A [gatA]. 9 480 94.126 T 01-11-2018 IPR004412 Glutamyl-tRNA(Gln) amidotransferase A subunit GO:0006412|GO:0030956|GO:0050567 KEGG: 00970+6.3.5.7|MetaCyc: PWY-5921 CDA09_00560 d3f18a8a0c7425f650fe41cbac6c8742 487 TIGRFAM TIGR00132 gatA: aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase, A subunit 10 480 1.0E-179 T 01-11-2018 IPR004412 Glutamyl-tRNA(Gln) amidotransferase A subunit GO:0006412|GO:0030956|GO:0050567 KEGG: 00970+6.3.5.7|MetaCyc: PWY-5921 CDA09_00560 d3f18a8a0c7425f650fe41cbac6c8742 487 SUPERFAMILY SSF75304 3 486 9.55E-166 T 01-11-2018 IPR036928 Amidase signature (AS) superfamily KEGG: 00970+6.3.5.7|MetaCyc: PWY-5921 CDA09_00560 d3f18a8a0c7425f650fe41cbac6c8742 487 Gene3D G3DSA:3.90.1300.10 1 487 1.8E-203 T 01-11-2018 IPR036928 Amidase signature (AS) superfamily KEGG: 00970+6.3.5.7|MetaCyc: PWY-5921 CDA09_00560 d3f18a8a0c7425f650fe41cbac6c8742 487 ProSitePatterns PS00571 Amidases signature. 149 180 - T 01-11-2018 IPR020556 Amidase, conserved site KEGG: 00970+6.3.5.7|MetaCyc: PWY-5921|Reactome: R-HSA-2142753 CDA09_00560 d3f18a8a0c7425f650fe41cbac6c8742 487 Pfam PF01425 Amidase 23 469 2.5E-157 T 01-11-2018 IPR023631 Amidase signature domain KEGG: 00970+6.3.5.7|MetaCyc: PWY-5921 CDA09_12125 99f609fd7cfee7e29fef7e919fffeca9 213 SMART SM00481 3 69 4.4E-10 T 01-11-2018 IPR003141 Polymerase/histidinol phosphatase, N-terminal CDA09_12125 99f609fd7cfee7e29fef7e919fffeca9 213 Pfam PF02811 PHP domain 4 71 2.6E-8 T 01-11-2018 IPR004013 PHP domain GO:0003824 CDA09_12125 99f609fd7cfee7e29fef7e919fffeca9 213 Pfam PF13263 PHP-associated 145 198 8.9E-14 T 01-11-2018 CDA09_12125 99f609fd7cfee7e29fef7e919fffeca9 213 Gene3D G3DSA:3.20.20.140 2 202 1.1E-40 T 01-11-2018 CDA09_12125 99f609fd7cfee7e29fef7e919fffeca9 213 SUPERFAMILY SSF89550 1 196 8.37E-39 T 01-11-2018 IPR016195 Polymerase/histidinol phosphatase-like GO:0003824 Reactome: R-HSA-6784531|Reactome: R-HSA-6791226 CDA09_07360 c615c179888e77b4d1b1f6f748bff50c 256 ProSitePatterns PS00092 N-6 Adenine-specific DNA methylases signature. 175 181 - T 01-11-2018 IPR002052 DNA methylase, N-6 adenine-specific, conserved site GO:0003676|GO:0008168|GO:0032259 CDA09_07360 c615c179888e77b4d1b1f6f748bff50c 256 PRINTS PR00505 D12 class N6 adenine-specific DNA methyltransferase signature 31 45 1.3E-14 T 01-11-2018 IPR012327 D12 class N6 adenine-specific DNA methyltransferase GO:0009007|GO:0032775 CDA09_07360 c615c179888e77b4d1b1f6f748bff50c 256 PRINTS PR00505 D12 class N6 adenine-specific DNA methyltransferase signature 51 64 1.3E-14 T 01-11-2018 IPR012327 D12 class N6 adenine-specific DNA methyltransferase GO:0009007|GO:0032775 CDA09_07360 c615c179888e77b4d1b1f6f748bff50c 256 PRINTS PR00505 D12 class N6 adenine-specific DNA methyltransferase signature 10 26 1.3E-14 T 01-11-2018 IPR012327 D12 class N6 adenine-specific DNA methyltransferase GO:0009007|GO:0032775 CDA09_07360 c615c179888e77b4d1b1f6f748bff50c 256 PRINTS PR00505 D12 class N6 adenine-specific DNA methyltransferase signature 172 184 1.3E-14 T 01-11-2018 IPR012327 D12 class N6 adenine-specific DNA methyltransferase GO:0009007|GO:0032775 CDA09_07360 c615c179888e77b4d1b1f6f748bff50c 256 PIRSF PIRSF000398 1 256 7.1E-47 T 01-11-2018 IPR012263 Adenine modification methylase, M.EcoRV-type GO:0009007|GO:0032775 CDA09_07360 c615c179888e77b4d1b1f6f748bff50c 256 Gene3D G3DSA:1.10.1020.10 58 152 4.0E-45 T 01-11-2018 IPR023095 Adenine-specific methyltransferase, domain 2 GO:0009007 CDA09_07360 c615c179888e77b4d1b1f6f748bff50c 256 SUPERFAMILY SSF53335 5 256 1.37E-61 T 01-11-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase CDA09_07360 c615c179888e77b4d1b1f6f748bff50c 256 Pfam PF02086 D12 class N6 adenine-specific DNA methyltransferase 10 194 1.8E-26 T 01-11-2018 IPR012327 D12 class N6 adenine-specific DNA methyltransferase GO:0009007|GO:0032775 CDA09_07360 c615c179888e77b4d1b1f6f748bff50c 256 Gene3D G3DSA:3.40.50.150 8 224 4.0E-45 T 01-11-2018 CDA09_11620 9ad5abf28cc00be8c6fe62c0158fb16e 89 Gene3D G3DSA:1.20.58.1000 1 89 9.4E-24 T 01-11-2018 IPR038390 Metal-sensitive transcriptional repressor superfamily CDA09_11620 9ad5abf28cc00be8c6fe62c0158fb16e 89 Pfam PF02583 Metal-sensitive transcriptional repressor 7 85 1.3E-22 T 01-11-2018 IPR003735 Metal-sensitive transcriptional repressor GO:0003677|GO:0006355|GO:0046872 CDA09_05100 b9bbed84a9d3c321a541f064d79d5308 311 Pfam PF01259 SAICAR synthetase 16 282 2.9E-98 T 01-11-2018 IPR028923 SAICAR synthetase/ADE2, N-terminal KEGG: 00230+6.3.2.6|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7234|Reactome: R-HSA-73817 CDA09_05100 b9bbed84a9d3c321a541f064d79d5308 311 Gene3D G3DSA:3.30.200.20 4 104 4.4E-32 T 01-11-2018 CDA09_05100 b9bbed84a9d3c321a541f064d79d5308 311 Hamap MF_00137 Phosphoribosylaminoimidazole-succinocarboxamide synthase [purC]. 13 307 24.846 T 01-11-2018 IPR028923 SAICAR synthetase/ADE2, N-terminal KEGG: 00230+6.3.2.6|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7234|Reactome: R-HSA-73817 CDA09_05100 b9bbed84a9d3c321a541f064d79d5308 311 ProSitePatterns PS01058 SAICAR synthetase signature 2. 219 227 - T 01-11-2018 IPR018236 SAICAR synthetase, conserved site GO:0004639|GO:0006164 KEGG: 00230+6.3.2.6|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7234|Reactome: R-HSA-73817 CDA09_05100 b9bbed84a9d3c321a541f064d79d5308 311 ProSitePatterns PS01057 SAICAR synthetase signature 1. 106 120 - T 01-11-2018 IPR018236 SAICAR synthetase, conserved site GO:0004639|GO:0006164 KEGG: 00230+6.3.2.6|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7234|Reactome: R-HSA-73817 CDA09_05100 b9bbed84a9d3c321a541f064d79d5308 311 SUPERFAMILY SSF56104 6 309 1.14E-99 T 01-11-2018 CDA09_05100 b9bbed84a9d3c321a541f064d79d5308 311 Gene3D G3DSA:3.30.470.20 106 263 7.4E-56 T 01-11-2018 CDA09_05100 b9bbed84a9d3c321a541f064d79d5308 311 TIGRFAM TIGR00081 purC: phosphoribosylaminoimidazolesuccinocarboxamide synthase 16 307 9.8E-73 T 01-11-2018 IPR001636 Phosphoribosylaminoimidazole-succinocarboxamide synthase GO:0004639|GO:0006164 KEGG: 00230+6.3.2.6|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7234 CDA09_13060 06ba043d55aac3aef383c3027cccf5ad 481 Pfam PF11855 Protein of unknown function (DUF3375) 11 479 6.0E-160 T 01-11-2018 IPR021804 Protein of unknown function DUF3375 CDA09_05925 bb3a202e4aa13c8fc9de49d3f800e4d7 336 SUPERFAMILY SSF53850 25 335 4.97E-90 T 01-11-2018 CDA09_05925 bb3a202e4aa13c8fc9de49d3f800e4d7 336 TIGRFAM TIGR00971 3a0106s03: sulfate ABC transporter, sulfate-binding protein 25 333 2.7E-146 T 01-11-2018 IPR005669 Thiosulphate/Sulfate-binding protein GO:0008272|GO:0015419 CDA09_05925 bb3a202e4aa13c8fc9de49d3f800e4d7 336 ProSitePatterns PS00401 Prokaryotic sulfate-binding proteins signature 1. 53 65 - T 01-11-2018 IPR000957 Sulphate/thiosulphate-binding, conserved site CDA09_05925 bb3a202e4aa13c8fc9de49d3f800e4d7 336 Pfam PF13531 Bacterial extracellular solute-binding protein 37 286 3.3E-42 T 01-11-2018 CDA09_05925 bb3a202e4aa13c8fc9de49d3f800e4d7 336 ProSitePatterns PS00757 Prokaryotic sulfate-binding proteins signature 2. 151 159 - T 01-11-2018 IPR034408 Sulphate/thiosulphate-binding site GO:1901681 CDA09_05925 bb3a202e4aa13c8fc9de49d3f800e4d7 336 Gene3D G3DSA:3.40.190.10 32 302 1.5E-133 T 01-11-2018 CDA09_05925 bb3a202e4aa13c8fc9de49d3f800e4d7 336 Gene3D G3DSA:3.40.190.10 120 332 1.5E-133 T 01-11-2018 CDA09_06175 b0db1a1c90bdf975e2371cf60ca59fb4 895 Pfam PF11940 Domain of unknown function (DUF3458) Ig-like fold 458 562 3.8E-31 T 01-11-2018 IPR035414 Peptidase M1, alanyl aminopeptidase, Ig-like fold CDA09_06175 b0db1a1c90bdf975e2371cf60ca59fb4 895 Gene3D G3DSA:2.60.40.1730 16 197 4.4E-66 T 01-11-2018 CDA09_06175 b0db1a1c90bdf975e2371cf60ca59fb4 895 Gene3D G3DSA:1.10.390.10 283 457 3.8E-66 T 01-11-2018 IPR027268 Peptidase M4/M1, CTD superfamily CDA09_06175 b0db1a1c90bdf975e2371cf60ca59fb4 895 TIGRFAM TIGR02414 pepN_proteo: aminopeptidase N 13 893 0.0 T 01-11-2018 IPR012779 Peptidase M1, alanyl aminopeptidase GO:0008270 CDA09_06175 b0db1a1c90bdf975e2371cf60ca59fb4 895 Gene3D G3DSA:1.25.50.10 564 894 8.1E-115 T 01-11-2018 IPR037144 Peptidase M1, alanyl aminopeptidase, C-terminal domain superfamily CDA09_06175 b0db1a1c90bdf975e2371cf60ca59fb4 895 SUPERFAMILY SSF55486 208 463 6.01E-72 T 01-11-2018 CDA09_06175 b0db1a1c90bdf975e2371cf60ca59fb4 895 SUPERFAMILY SSF63737 6 195 2.22E-39 T 01-11-2018 CDA09_06175 b0db1a1c90bdf975e2371cf60ca59fb4 895 Pfam PF17432 Domain of unknown function (DUF3458_C) ARM repeats 566 894 2.2E-116 T 01-11-2018 IPR024601 Peptidase M1, alanyl aminopeptidase, C-terminal CDA09_06175 b0db1a1c90bdf975e2371cf60ca59fb4 895 Pfam PF01433 Peptidase family M1 domain 211 451 4.0E-56 T 01-11-2018 IPR014782 Peptidase M1, membrane alanine aminopeptidase, N-terminal GO:0008237|GO:0008270 CDA09_06175 b0db1a1c90bdf975e2371cf60ca59fb4 895 PRINTS PR00756 Membrane alanyl dipeptidase (M1) family signature 297 312 7.7E-8 T 01-11-2018 IPR014782 Peptidase M1, membrane alanine aminopeptidase, N-terminal GO:0008237|GO:0008270 CDA09_06175 b0db1a1c90bdf975e2371cf60ca59fb4 895 PRINTS PR00756 Membrane alanyl dipeptidase (M1) family signature 179 194 7.7E-8 T 01-11-2018 IPR014782 Peptidase M1, membrane alanine aminopeptidase, N-terminal GO:0008237|GO:0008270 CDA09_06175 b0db1a1c90bdf975e2371cf60ca59fb4 895 PRINTS PR00756 Membrane alanyl dipeptidase (M1) family signature 261 271 7.7E-8 T 01-11-2018 IPR014782 Peptidase M1, membrane alanine aminopeptidase, N-terminal GO:0008237|GO:0008270 CDA09_06175 b0db1a1c90bdf975e2371cf60ca59fb4 895 PRINTS PR00756 Membrane alanyl dipeptidase (M1) family signature 316 328 7.7E-8 T 01-11-2018 IPR014782 Peptidase M1, membrane alanine aminopeptidase, N-terminal GO:0008237|GO:0008270 CDA09_06175 b0db1a1c90bdf975e2371cf60ca59fb4 895 Gene3D G3DSA:2.60.40.1840 458 563 1.2E-33 T 01-11-2018 IPR038438 Alanyl aminopeptidase, Ig-like domain superfamily CDA09_06175 b0db1a1c90bdf975e2371cf60ca59fb4 895 Gene3D G3DSA:1.10.1740.60 199 282 2.5E-36 T 01-11-2018 CDA09_10750 a1c37025ab3386e387ad3e51a9c7ad9b 273 SUPERFAMILY SSF46689 223 271 1.04E-6 T 01-11-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 CDA09_10750 a1c37025ab3386e387ad3e51a9c7ad9b 273 Pfam PF12833 Helix-turn-helix domain 193 271 6.5E-17 T 01-11-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 CDA09_10750 a1c37025ab3386e387ad3e51a9c7ad9b 273 Pfam PF12852 Cupin 2 155 2.0E-30 T 01-11-2018 IPR032783 AraC-type transcription regulator, ligand-binding domain CDA09_10750 a1c37025ab3386e387ad3e51a9c7ad9b 273 SUPERFAMILY SSF46689 171 221 1.16E-9 T 01-11-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 CDA09_10750 a1c37025ab3386e387ad3e51a9c7ad9b 273 Gene3D G3DSA:1.10.10.60 167 273 1.8E-22 T 01-11-2018 CDA09_10750 a1c37025ab3386e387ad3e51a9c7ad9b 273 ProSitePatterns PS00041 Bacterial regulatory proteins, araC family signature. 224 265 - T 01-11-2018 IPR018062 HTH domain AraC-type, conserved site GO:0003700|GO:0006355|GO:0043565 CDA09_10750 a1c37025ab3386e387ad3e51a9c7ad9b 273 SMART SM00342 187 269 7.6E-22 T 01-11-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 CDA09_01785 9e83882b0ffb3eb604dd1eb9a7eea037 91 SUPERFAMILY SSF47729 1 90 1.24E-29 T 01-11-2018 IPR010992 Integration host factor (IHF)-like DNA-binding domain superfamily GO:0003677 CDA09_01785 9e83882b0ffb3eb604dd1eb9a7eea037 91 PRINTS PR01727 Prokaryotic integration host factor signature 58 71 4.6E-16 T 01-11-2018 IPR000119 Histone-like DNA-binding protein GO:0003677 CDA09_01785 9e83882b0ffb3eb604dd1eb9a7eea037 91 PRINTS PR01727 Prokaryotic integration host factor signature 40 55 4.6E-16 T 01-11-2018 IPR000119 Histone-like DNA-binding protein GO:0003677 CDA09_01785 9e83882b0ffb3eb604dd1eb9a7eea037 91 PRINTS PR01727 Prokaryotic integration host factor signature 74 88 4.6E-16 T 01-11-2018 IPR000119 Histone-like DNA-binding protein GO:0003677 CDA09_01785 9e83882b0ffb3eb604dd1eb9a7eea037 91 ProSitePatterns PS00045 Bacterial histone-like DNA-binding proteins signature. 46 65 - T 01-11-2018 IPR020816 Histone-like DNA-binding protein, conserved site GO:0003677 CDA09_01785 9e83882b0ffb3eb604dd1eb9a7eea037 91 Pfam PF00216 Bacterial DNA-binding protein 1 90 3.3E-30 T 01-11-2018 IPR000119 Histone-like DNA-binding protein GO:0003677 CDA09_01785 9e83882b0ffb3eb604dd1eb9a7eea037 91 SMART SM00411 1 90 1.6E-39 T 01-11-2018 IPR000119 Histone-like DNA-binding protein GO:0003677 CDA09_01785 9e83882b0ffb3eb604dd1eb9a7eea037 91 Gene3D G3DSA:4.10.520.10 1 91 1.1E-33 T 01-11-2018 IPR010992 Integration host factor (IHF)-like DNA-binding domain superfamily GO:0003677 CDA09_15190 07ad67982526d5dd1b690fa8f5651041 355 SUPERFAMILY SSF51445 15 305 5.05E-80 T 01-11-2018 IPR017853 Glycoside hydrolase superfamily CDA09_15190 07ad67982526d5dd1b690fa8f5651041 355 Gene3D G3DSA:3.20.20.300 5 349 1.6E-113 T 01-11-2018 IPR036962 Glycoside hydrolase, family 3, N-terminal domain superfamily GO:0004553|GO:0005975 CDA09_15190 07ad67982526d5dd1b690fa8f5651041 355 Pfam PF00933 Glycosyl hydrolase family 3 N terminal domain 18 311 2.3E-71 T 01-11-2018 IPR001764 Glycoside hydrolase, family 3, N-terminal GO:0004553|GO:0005975 CDA09_15190 07ad67982526d5dd1b690fa8f5651041 355 Hamap MF_00364 Beta-hexosaminidase [nagZ]. 15 352 51.38 T 01-11-2018 IPR022956 Beta-hexosaminidase, bacterial GO:0004563 KEGG: 00511+3.2.1.52|KEGG: 00513+3.2.1.52|KEGG: 00520+3.2.1.52|KEGG: 00531+3.2.1.52|KEGG: 00603+3.2.1.52|KEGG: 00604+3.2.1.52|MetaCyc: PWY-6902|MetaCyc: PWY-7822|MetaCyc: PWY-7883 CDA09_15190 07ad67982526d5dd1b690fa8f5651041 355 ProSitePatterns PS00775 Glycosyl hydrolases family 3 active site. 249 266 - T 01-11-2018 IPR019800 Glycoside hydrolase, family 3, active site GO:0004553|GO:0005975 CDA09_09825 60922691f551ee64ade2416376b8034b 207 Pfam PF06240 Carbon monoxide dehydrogenase subunit G (CoxG) 9 147 3.4E-19 T 01-11-2018 IPR010419 Carbon monoxide dehydrogenase subunit G CDA09_09825 60922691f551ee64ade2416376b8034b 207 Gene3D G3DSA:3.30.530.20 1 162 1.1E-38 T 01-11-2018 IPR023393 START-like domain superfamily CDA09_09825 60922691f551ee64ade2416376b8034b 207 SUPERFAMILY SSF55961 4 150 9.17E-30 T 01-11-2018 CDA09_15680 d47637092077813f7c1b1768e3f25605 774 Gene3D G3DSA:1.10.599.10 493 684 2.1E-76 T 01-11-2018 IPR013985 Aldehyde ferredoxin oxidoreductase, domain 3 GO:0016625|GO:0051536|GO:0055114 KEGG: 00030+1.2.7.5 CDA09_15680 d47637092077813f7c1b1768e3f25605 774 SMART SM00790 23 227 7.9E-76 T 01-11-2018 IPR013983 Aldehyde ferredoxin oxidoreductase, N-terminal GO:0016491|GO:0016625|GO:0051536|GO:0055114 CDA09_15680 d47637092077813f7c1b1768e3f25605 774 Pfam PF01314 Aldehyde ferredoxin oxidoreductase, domains 2 & 3 241 684 2.5E-94 T 01-11-2018 IPR001203 Aldehyde ferredoxin oxidoreductase, C-terminal GO:0009055|GO:0016491|GO:0016625|GO:0051536|GO:0055114 CDA09_15680 d47637092077813f7c1b1768e3f25605 774 SUPERFAMILY SSF48310 235 684 5.89E-86 T 01-11-2018 IPR036021 Aldehyde ferredoxin oxidoreductase-like, C-terminal GO:0009055|GO:0016491|GO:0016625|GO:0051536|GO:0055114 CDA09_15680 d47637092077813f7c1b1768e3f25605 774 SUPERFAMILY SSF56228 21 228 1.7E-49 T 01-11-2018 IPR036503 Aldehyde ferredoxin oxidoreductase, N-terminal domain superfamily CDA09_15680 d47637092077813f7c1b1768e3f25605 774 SUPERFAMILY SSF54285 707 774 1.83E-9 T 01-11-2018 IPR016155 Molybdopterin synthase/thiamin biosynthesis sulphur carrier, beta-grasp CDA09_15680 d47637092077813f7c1b1768e3f25605 774 Gene3D G3DSA:3.60.9.10 19 228 1.6E-45 T 01-11-2018 IPR036503 Aldehyde ferredoxin oxidoreductase, N-terminal domain superfamily CDA09_15680 d47637092077813f7c1b1768e3f25605 774 Gene3D G3DSA:1.10.569.10 362 492 2.1E-76 T 01-11-2018 IPR013984 Aldehyde ferredoxin oxidoreductase, domain 2 CDA09_15680 d47637092077813f7c1b1768e3f25605 774 Pfam PF02730 Aldehyde ferredoxin oxidoreductase, N-terminal domain 25 225 7.9E-43 T 01-11-2018 IPR013983 Aldehyde ferredoxin oxidoreductase, N-terminal GO:0016491|GO:0016625|GO:0051536|GO:0055114 CDA09_15680 d47637092077813f7c1b1768e3f25605 774 Gene3D G3DSA:3.10.20.30 703 774 7.6E-9 T 01-11-2018 IPR012675 Beta-grasp domain superfamily CDA09_15680 d47637092077813f7c1b1768e3f25605 774 Pfam PF02597 ThiS family 708 774 2.1E-8 T 01-11-2018 IPR003749 Sulfur carrier ThiS/MoaD-like Reactome: R-HSA-947581 CDA09_00730 cff56a6614e1a03d00a6ff44ee777997 1719 Pfam PF00270 DEAD/DEAH box helicase 299 467 2.0E-19 T 01-11-2018 IPR011545 DEAD/DEAH box helicase domain GO:0003676|GO:0005524 CDA09_00730 cff56a6614e1a03d00a6ff44ee777997 1719 SMART SM00490 535 616 1.3E-26 T 01-11-2018 IPR001650 Helicase, C-terminal CDA09_00730 cff56a6614e1a03d00a6ff44ee777997 1719 Pfam PF00271 Helicase conserved C-terminal domain 506 614 1.9E-18 T 01-11-2018 IPR001650 Helicase, C-terminal CDA09_00730 cff56a6614e1a03d00a6ff44ee777997 1719 SUPERFAMILY SSF52540 306 627 6.46E-56 T 01-11-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CDA09_00730 cff56a6614e1a03d00a6ff44ee777997 1719 Pfam PF13538 UvrD-like helicase C-terminal domain 1527 1575 1.5E-13 T 01-11-2018 IPR027785 UvrD-like helicase C-terminal domain CDA09_00730 cff56a6614e1a03d00a6ff44ee777997 1719 SUPERFAMILY SSF53098 11 149 2.15E-6 T 01-11-2018 IPR012337 Ribonuclease H-like superfamily CDA09_00730 cff56a6614e1a03d00a6ff44ee777997 1719 Gene3D G3DSA:3.40.50.300 1482 1597 1.3E-14 T 01-11-2018 CDA09_00730 cff56a6614e1a03d00a6ff44ee777997 1719 Gene3D G3DSA:3.40.50.300 1297 1442 4.9E-9 T 01-11-2018 CDA09_00730 cff56a6614e1a03d00a6ff44ee777997 1719 Pfam PF13245 AAA domain 1086 1273 1.6E-27 T 01-11-2018 CDA09_00730 cff56a6614e1a03d00a6ff44ee777997 1719 Gene3D G3DSA:3.40.50.300 491 672 1.6E-46 T 01-11-2018 CDA09_00730 cff56a6614e1a03d00a6ff44ee777997 1719 TIGRFAM TIGR00614 recQ_fam: ATP-dependent DNA helicase, RecQ family 297 644 5.8E-86 T 01-11-2018 IPR004589 DNA helicase, ATP-dependent, RecQ type GO:0006310|GO:0008026 CDA09_00730 cff56a6614e1a03d00a6ff44ee777997 1719 Gene3D G3DSA:3.30.420.10 13 168 7.6E-9 T 01-11-2018 IPR036397 Ribonuclease H superfamily GO:0003676 CDA09_00730 cff56a6614e1a03d00a6ff44ee777997 1719 SMART SM00487 292 499 2.1E-20 T 01-11-2018 IPR014001 Helicase superfamily 1/2, ATP-binding domain CDA09_00730 cff56a6614e1a03d00a6ff44ee777997 1719 SUPERFAMILY SSF52540 1078 1578 1.01E-76 T 01-11-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CDA09_00730 cff56a6614e1a03d00a6ff44ee777997 1719 Gene3D G3DSA:3.40.50.300 283 480 1.4E-58 T 01-11-2018 CDA09_00730 cff56a6614e1a03d00a6ff44ee777997 1719 Gene3D G3DSA:3.40.50.300 1075 1294 3.0E-45 T 01-11-2018 CDA09_22900 448120fb78644930f29ada354ae521a3 335 Pfam PF02492 CobW/HypB/UreG, nucleotide-binding domain 108 269 1.6E-33 T 01-11-2018 IPR003495 CobW/HypB/UreG, nucleotide-binding domain CDA09_22900 448120fb78644930f29ada354ae521a3 335 TIGRFAM TIGR00073 hypB: hydrogenase accessory protein HypB 80 288 7.0E-85 T 01-11-2018 IPR004392 Hydrogenase maturation factor HypB GO:0016151|GO:0051604 CDA09_22900 448120fb78644930f29ada354ae521a3 335 SUPERFAMILY SSF52540 86 289 4.57E-34 T 01-11-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CDA09_22900 448120fb78644930f29ada354ae521a3 335 Gene3D G3DSA:3.40.50.300 88 298 8.2E-62 T 01-11-2018 CDA09_22900 448120fb78644930f29ada354ae521a3 335 PIRSF PIRSF005624 75 303 1.7E-91 T 01-11-2018 IPR012202 [NiFe]-hydrogenase/urease maturation factor, Ni2-binding GTPase GO:0003924|GO:0016151 CDA09_17105 3a09af48811208649e4bcd8ab1ee27d4 356 SUPERFAMILY SSF110296 8 327 8.11E-42 T 01-11-2018 CDA09_17105 3a09af48811208649e4bcd8ab1ee27d4 356 Pfam PF14870 Photosynthesis system II assembly factor YCF48 162 279 2.7E-8 T 01-11-2018 IPR028203 Photosynthesis system II assembly factor Ycf48/Hcf136-like domain CDA09_17105 3a09af48811208649e4bcd8ab1ee27d4 356 Pfam PF14870 Photosynthesis system II assembly factor YCF48 73 125 2.9E-6 T 01-11-2018 IPR028203 Photosynthesis system II assembly factor Ycf48/Hcf136-like domain CDA09_17105 3a09af48811208649e4bcd8ab1ee27d4 356 Gene3D G3DSA:2.130.10.10 2 334 1.1E-24 T 01-11-2018 IPR015943 WD40/YVTN repeat-like-containing domain superfamily GO:0005515 CDA09_03720 790e32612fee1484b0e032e1ffb77f5b 163 ProSitePatterns PS00374 Methylated-DNA--protein-cysteine methyltransferase active site. 127 133 - T 01-11-2018 IPR001497 Methylated-DNA-[protein]-cysteine S-methyltransferase, active site GO:0003908|GO:0006281 Reactome: R-HSA-5657655 CDA09_03720 790e32612fee1484b0e032e1ffb77f5b 163 Gene3D G3DSA:1.10.10.10 78 163 3.6E-30 T 01-11-2018 IPR036388 Winged helix-like DNA-binding domain superfamily CDA09_03720 790e32612fee1484b0e032e1ffb77f5b 163 SUPERFAMILY SSF46767 78 160 1.11E-25 T 01-11-2018 IPR036217 Methylated DNA-protein cysteine methyltransferase, DNA binding domain Reactome: R-HSA-5657655 CDA09_03720 790e32612fee1484b0e032e1ffb77f5b 163 Pfam PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain 80 160 5.7E-27 T 01-11-2018 IPR014048 Methylated-DNA-[protein]-cysteine S-methyltransferase, DNA binding GO:0003824|GO:0006281 Reactome: R-HSA-5657655 CDA09_03720 790e32612fee1484b0e032e1ffb77f5b 163 TIGRFAM TIGR00589 ogt: methylated-DNA--[protein]-cysteine S-methyltransferase 79 160 8.6E-26 T 01-11-2018 IPR014048 Methylated-DNA-[protein]-cysteine S-methyltransferase, DNA binding GO:0003824|GO:0006281 Reactome: R-HSA-5657655 CDA09_03720 790e32612fee1484b0e032e1ffb77f5b 163 SUPERFAMILY SSF53155 13 84 1.22E-9 T 01-11-2018 IPR036631 Methylated DNA-protein cysteine methyltransferase domain superfamily GO:0003908|GO:0006281 Reactome: R-HSA-5657655 CDA09_05335 a63844969eb62541d8409ade58b52aec 192 Gene3D G3DSA:1.10.60.30 30 104 2.4E-32 T 01-11-2018 CDA09_05335 a63844969eb62541d8409ade58b52aec 192 SUPERFAMILY SSF158710 30 172 1.31E-50 T 01-11-2018 IPR023153 PSPTO4464-like domain superfamily CDA09_05335 a63844969eb62541d8409ade58b52aec 192 PIRSF PIRSF016183 3 177 2.2E-64 T 01-11-2018 IPR006839 Ribosome-associated, YjgA CDA09_05335 a63844969eb62541d8409ade58b52aec 192 Hamap MF_00765 UPF0307 protein YjgA [yjgA]. 10 174 21.998 T 01-11-2018 IPR006839 Ribosome-associated, YjgA CDA09_05335 a63844969eb62541d8409ade58b52aec 192 Pfam PF04751 Protein of unknown function (DUF615) 19 170 2.5E-55 T 01-11-2018 IPR006839 Ribosome-associated, YjgA CDA09_05335 a63844969eb62541d8409ade58b52aec 192 Gene3D G3DSA:1.10.60.30 107 179 4.8E-22 T 01-11-2018 CDA09_10775 10b5d9eb5ecc209d8af1a3b6ab74a6b1 275 Gene3D G3DSA:3.40.190.10 34 264 3.5E-66 T 01-11-2018 CDA09_10775 10b5d9eb5ecc209d8af1a3b6ab74a6b1 275 Pfam PF12849 PBP superfamily domain 30 257 2.3E-34 T 01-11-2018 IPR024370 PBP domain CDA09_10775 10b5d9eb5ecc209d8af1a3b6ab74a6b1 275 Gene3D G3DSA:3.40.190.10 103 234 3.5E-66 T 01-11-2018 CDA09_10775 10b5d9eb5ecc209d8af1a3b6ab74a6b1 275 SUPERFAMILY SSF53850 31 272 1.68E-59 T 01-11-2018 CDA09_16895 30f59452aeb629bf5cf2369ffe6fb1f0 195 Pfam PF00293 NUDIX domain 32 116 2.5E-16 T 01-11-2018 IPR000086 NUDIX hydrolase domain GO:0016787 CDA09_16895 30f59452aeb629bf5cf2369ffe6fb1f0 195 SUPERFAMILY SSF55811 31 184 4.6E-40 T 01-11-2018 IPR015797 NUDIX hydrolase-like domain superfamily GO:0016787 CDA09_16895 30f59452aeb629bf5cf2369ffe6fb1f0 195 Gene3D G3DSA:3.90.79.10 13 189 2.8E-54 T 01-11-2018 CDA09_18900 12d3d0a47d0071f599da75f45df536e9 228 Pfam PF04337 Protein of unknown function, DUF480 16 163 1.2E-58 T 01-11-2018 IPR007432 Protein of unknown function DUF480 CDA09_18900 12d3d0a47d0071f599da75f45df536e9 228 Hamap MF_01584 UPF0502 protein YceH [yceH]. 16 225 30.723 T 01-11-2018 IPR007432 Protein of unknown function DUF480 CDA09_18900 12d3d0a47d0071f599da75f45df536e9 228 Gene3D G3DSA:1.10.10.10 102 180 1.7E-29 T 01-11-2018 IPR036388 Winged helix-like DNA-binding domain superfamily CDA09_18900 12d3d0a47d0071f599da75f45df536e9 228 Gene3D G3DSA:1.10.10.10 2 100 2.4E-31 T 01-11-2018 IPR036388 Winged helix-like DNA-binding domain superfamily CDA09_18900 12d3d0a47d0071f599da75f45df536e9 228 SUPERFAMILY SSF46785 15 94 1.78E-28 T 01-11-2018 IPR036390 Winged helix DNA-binding domain superfamily CDA09_18900 12d3d0a47d0071f599da75f45df536e9 228 SUPERFAMILY SSF46785 100 177 4.9E-23 T 01-11-2018 IPR036390 Winged helix DNA-binding domain superfamily CDA09_01875 69c68c76a8133bac03a5d98592c9b8fc 1342 SMART SM00388 700 765 2.6E-22 T 01-11-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 CDA09_01875 69c68c76a8133bac03a5d98592c9b8fc 1342 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 561 680 3.3E-13 T 01-11-2018 IPR000014 PAS domain CDA09_01875 69c68c76a8133bac03a5d98592c9b8fc 1342 Pfam PF00072 Response regulator receiver domain 1094 1206 2.1E-23 T 01-11-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 CDA09_01875 69c68c76a8133bac03a5d98592c9b8fc 1342 PRINTS PR00344 Bacterial sensor protein C-terminal signature 856 870 2.1E-15 T 01-11-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 CDA09_01875 69c68c76a8133bac03a5d98592c9b8fc 1342 PRINTS PR00344 Bacterial sensor protein C-terminal signature 874 884 2.1E-15 T 01-11-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 CDA09_01875 69c68c76a8133bac03a5d98592c9b8fc 1342 PRINTS PR00344 Bacterial sensor protein C-terminal signature 891 909 2.1E-15 T 01-11-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 CDA09_01875 69c68c76a8133bac03a5d98592c9b8fc 1342 PRINTS PR00344 Bacterial sensor protein C-terminal signature 915 928 2.1E-15 T 01-11-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 CDA09_01875 69c68c76a8133bac03a5d98592c9b8fc 1342 SMART SM00387 812 931 1.9E-35 T 01-11-2018 IPR003594 Histidine kinase/HSP90-like ATPase CDA09_01875 69c68c76a8133bac03a5d98592c9b8fc 1342 SUPERFAMILY SSF55785 554 671 3.29E-20 T 01-11-2018 IPR035965 PAS domain superfamily CDA09_01875 69c68c76a8133bac03a5d98592c9b8fc 1342 Pfam PF00512 His Kinase A (phospho-acceptor) domain 700 765 4.7E-18 T 01-11-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 CDA09_01875 69c68c76a8133bac03a5d98592c9b8fc 1342 SUPERFAMILY SSF52172 1091 1214 1.85E-35 T 01-11-2018 IPR011006 CheY-like superfamily CDA09_01875 69c68c76a8133bac03a5d98592c9b8fc 1342 Pfam PF03924 CHASE domain 282 469 1.4E-32 T 01-11-2018 IPR006189 CHASE domain CDA09_01875 69c68c76a8133bac03a5d98592c9b8fc 1342 SUPERFAMILY SSF55874 754 929 5.76E-43 T 01-11-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily CDA09_01875 69c68c76a8133bac03a5d98592c9b8fc 1342 Pfam PF05231 MASE1 39 230 5.7E-21 T 01-11-2018 IPR007895 MASE1 CDA09_01875 69c68c76a8133bac03a5d98592c9b8fc 1342 Gene3D G3DSA:3.30.450.350 283 494 5.9E-20 T 01-11-2018 CDA09_01875 69c68c76a8133bac03a5d98592c9b8fc 1342 Gene3D G3DSA:1.10.287.130 669 763 7.4E-28 T 01-11-2018 CDA09_01875 69c68c76a8133bac03a5d98592c9b8fc 1342 SMART SM01079 279 475 3.6E-33 T 01-11-2018 IPR006189 CHASE domain CDA09_01875 69c68c76a8133bac03a5d98592c9b8fc 1342 Gene3D G3DSA:1.20.120.160 1221 1328 3.4E-14 T 01-11-2018 IPR036641 HPT domain superfamily GO:0000160 CDA09_01875 69c68c76a8133bac03a5d98592c9b8fc 1342 Gene3D G3DSA:3.30.450.20 572 668 2.8E-19 T 01-11-2018 CDA09_01875 69c68c76a8133bac03a5d98592c9b8fc 1342 SMART SM00091 565 631 9.7E-6 T 01-11-2018 IPR000014 PAS domain CDA09_01875 69c68c76a8133bac03a5d98592c9b8fc 1342 SUPERFAMILY SSF47384 683 766 1.63E-19 T 01-11-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 CDA09_01875 69c68c76a8133bac03a5d98592c9b8fc 1342 SUPERFAMILY SSF47226 1189 1312 2.0E-17 T 01-11-2018 IPR036641 HPT domain superfamily GO:0000160 CDA09_01875 69c68c76a8133bac03a5d98592c9b8fc 1342 Pfam PF01627 Hpt domain 1243 1318 2.3E-8 T 01-11-2018 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160 CDA09_01875 69c68c76a8133bac03a5d98592c9b8fc 1342 Pfam PF08447 PAS fold 588 656 1.1E-12 T 01-11-2018 IPR013655 PAS fold-3 GO:0005515 CDA09_01875 69c68c76a8133bac03a5d98592c9b8fc 1342 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 813 930 1.2E-27 T 01-11-2018 IPR003594 Histidine kinase/HSP90-like ATPase CDA09_01875 69c68c76a8133bac03a5d98592c9b8fc 1342 Gene3D G3DSA:3.40.50.2300 1087 1210 2.3E-36 T 01-11-2018 CDA09_01875 69c68c76a8133bac03a5d98592c9b8fc 1342 SMART SM00448 1092 1206 3.4E-32 T 01-11-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 CDA09_01875 69c68c76a8133bac03a5d98592c9b8fc 1342 Gene3D G3DSA:3.30.565.10 764 934 6.5E-46 T 01-11-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily CDA09_09205 bb74ab19e578ab254f99e1a62d7d7036 509 Gene3D G3DSA:3.40.50.12780 13 399 4.3E-84 T 01-11-2018 CDA09_09205 bb74ab19e578ab254f99e1a62d7d7036 509 Gene3D G3DSA:3.30.300.30 401 507 4.4E-30 T 01-11-2018 CDA09_09205 bb74ab19e578ab254f99e1a62d7d7036 509 ProSitePatterns PS00455 Putative AMP-binding domain signature. 158 169 - T 01-11-2018 IPR020845 AMP-binding, conserved site CDA09_09205 bb74ab19e578ab254f99e1a62d7d7036 509 Pfam PF00501 AMP-binding enzyme 17 407 2.3E-61 T 01-11-2018 IPR000873 AMP-dependent synthetase/ligase GO:0003824 CDA09_09205 bb74ab19e578ab254f99e1a62d7d7036 509 SUPERFAMILY SSF56801 10 504 3.27E-118 T 01-11-2018 CDA09_09205 bb74ab19e578ab254f99e1a62d7d7036 509 Pfam PF13193 AMP-binding enzyme C-terminal domain 416 491 2.8E-17 T 01-11-2018 IPR025110 AMP-binding enzyme, C-terminal domain CDA09_04850 6ee79531e841f0140e1f158b303e571e 624 Pfam PF05840 Bacteriophage replication gene A protein (GPA) 145 414 8.7E-80 T 01-11-2018 IPR008766 Replication gene A protein GO:0006260 CDA09_06775 9f5028c2b0e6ebd70c1d96a08eb4eb11 89 PIRSF PIRSF004669 1 89 3.1E-34 T 01-11-2018 IPR002191 Bacterial export protein family 3 GO:0009306|GO:0016020 CDA09_06775 9f5028c2b0e6ebd70c1d96a08eb4eb11 89 Pfam PF01313 Bacterial export proteins, family 3 6 78 5.4E-31 T 01-11-2018 IPR002191 Bacterial export protein family 3 GO:0009306|GO:0016020 CDA09_06775 9f5028c2b0e6ebd70c1d96a08eb4eb11 89 TIGRFAM TIGR01402 fliQ: flagellar biosynthetic protein FliQ 1 88 2.5E-34 T 01-11-2018 IPR006305 Flagellar biosynthesis protein FliQ GO:0016021|GO:0044780 CDA09_06775 9f5028c2b0e6ebd70c1d96a08eb4eb11 89 PRINTS PR00952 Type III secretion system inner membrane Q protein family signature 39 54 4.6E-22 T 01-11-2018 IPR002191 Bacterial export protein family 3 GO:0009306|GO:0016020 CDA09_06775 9f5028c2b0e6ebd70c1d96a08eb4eb11 89 PRINTS PR00952 Type III secretion system inner membrane Q protein family signature 54 76 4.6E-22 T 01-11-2018 IPR002191 Bacterial export protein family 3 GO:0009306|GO:0016020 CDA09_06775 9f5028c2b0e6ebd70c1d96a08eb4eb11 89 PRINTS PR00952 Type III secretion system inner membrane Q protein family signature 18 39 4.6E-22 T 01-11-2018 IPR002191 Bacterial export protein family 3 GO:0009306|GO:0016020 CDA09_06000 335d75365d0de0685f18702925ee3ca0 390 Gene3D G3DSA:3.90.1150.10 12 377 2.7E-138 T 01-11-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 CDA09_06000 335d75365d0de0685f18702925ee3ca0 390 TIGRFAM TIGR00707 argD: transaminase, acetylornithine/succinylornithine family 4 381 2.8E-139 T 01-11-2018 IPR004636 Acetylornithine/Succinylornithine transaminase family GO:0006525|GO:0008483 CDA09_06000 335d75365d0de0685f18702925ee3ca0 390 ProSitePatterns PS00600 Aminotransferases class-III pyridoxal-phosphate attachment site. 211 248 - T 01-11-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 CDA09_06000 335d75365d0de0685f18702925ee3ca0 390 Hamap MF_01107 Acetylornithine/succinyldiaminopimelate aminotransferase [argD]. 3 387 69.229 T 01-11-2018 IPR004636 Acetylornithine/Succinylornithine transaminase family GO:0006525|GO:0008483 CDA09_06000 335d75365d0de0685f18702925ee3ca0 390 Gene3D G3DSA:3.40.640.10 47 293 2.7E-138 T 01-11-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 CDA09_06000 335d75365d0de0685f18702925ee3ca0 390 SUPERFAMILY SSF53383 2 382 1.79E-121 T 01-11-2018 IPR015424 Pyridoxal phosphate-dependent transferase CDA09_06000 335d75365d0de0685f18702925ee3ca0 390 Pfam PF00202 Aminotransferase class-III 11 380 7.0E-111 T 01-11-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 CDA09_06000 335d75365d0de0685f18702925ee3ca0 390 PIRSF PIRSF000521 1 146 2.4E-14 T 01-11-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 CDA09_06000 335d75365d0de0685f18702925ee3ca0 390 PIRSF PIRSF000521 162 387 1.7E-34 T 01-11-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 CDA09_11425 f25649d9690a35d9c58fd629ade29252 412 Gene3D G3DSA:2.130.10.10 221 410 1.5E-27 T 01-11-2018 IPR015943 WD40/YVTN repeat-like-containing domain superfamily GO:0005515 CDA09_11425 f25649d9690a35d9c58fd629ade29252 412 Gene3D G3DSA:2.130.10.10 142 220 1.8E-13 T 01-11-2018 IPR015943 WD40/YVTN repeat-like-containing domain superfamily GO:0005515 CDA09_11425 f25649d9690a35d9c58fd629ade29252 412 TIGRFAM TIGR02276 beta_rpt_yvtn: 40-residue YVTN family beta-propeller repeat 238 275 7.9E-8 T 01-11-2018 IPR011964 YVTN beta-propeller repeat CDA09_11425 f25649d9690a35d9c58fd629ade29252 412 TIGRFAM TIGR02276 beta_rpt_yvtn: 40-residue YVTN family beta-propeller repeat 136 177 1.0E-7 T 01-11-2018 IPR011964 YVTN beta-propeller repeat CDA09_11425 f25649d9690a35d9c58fd629ade29252 412 SUPERFAMILY SSF50969 51 352 2.55E-45 T 01-11-2018 IPR011044 Quinoprotein amine dehydrogenase, beta chain-like CDA09_11425 f25649d9690a35d9c58fd629ade29252 412 Gene3D G3DSA:2.130.10.10 39 141 5.4E-19 T 01-11-2018 IPR015943 WD40/YVTN repeat-like-containing domain superfamily GO:0005515 CDA09_11425 f25649d9690a35d9c58fd629ade29252 412 Pfam PF10282 Lactonase, 7-bladed beta-propeller 86 214 6.7E-6 T 01-11-2018 IPR019405 Lactonase, 7-bladed beta propeller CDA09_03800 f7cbb96208ca71b9d227a73239495c60 714 SUPERFAMILY SSF47323 406 565 1.61E-37 T 01-11-2018 IPR009080 Aminoacyl-tRNA synthetase, class Ia, anticodon-binding GO:0000166|GO:0004812|GO:0005524|GO:0006418 CDA09_03800 f7cbb96208ca71b9d227a73239495c60 714 ProSitePatterns PS00178 Aminoacyl-transfer RNA synthetases class-I signature. 12 23 - T 01-11-2018 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site GO:0000166|GO:0004812|GO:0005524|GO:0006418 CDA09_03800 f7cbb96208ca71b9d227a73239495c60 714 Pfam PF01588 Putative tRNA binding domain 615 710 8.6E-23 T 01-11-2018 IPR002547 tRNA-binding domain GO:0000049 Reactome: R-HSA-379716 CDA09_03800 f7cbb96208ca71b9d227a73239495c60 714 Gene3D G3DSA:2.20.28.20 139 173 1.1E-139 T 01-11-2018 IPR029038 Methionyl-tRNA synthetase, Zn-domain KEGG: 00450+6.1.1.10|KEGG: 00970+6.1.1.10|Reactome: R-HSA-2408517|Reactome: R-HSA-379716 CDA09_03800 f7cbb96208ca71b9d227a73239495c60 714 Pfam PF09334 tRNA synthetases class I (M) 5 413 2.2E-140 T 01-11-2018 IPR015413 Methionyl/Leucyl tRNA synthetase GO:0000166|GO:0004812|GO:0005524|GO:0006418 CDA09_03800 f7cbb96208ca71b9d227a73239495c60 714 SUPERFAMILY SSF52374 3 401 8.45E-90 T 01-11-2018 CDA09_03800 f7cbb96208ca71b9d227a73239495c60 714 Hamap MF_00098 Methionine--tRNA ligase [metG]. 3 564 39.03 T 01-11-2018 IPR023458 Methionine-tRNA ligase, type 1 GO:0004825 KEGG: 00450+6.1.1.10|KEGG: 00970+6.1.1.10|Reactome: R-HSA-2408517|Reactome: R-HSA-379716 CDA09_03800 f7cbb96208ca71b9d227a73239495c60 714 TIGRFAM TIGR00399 metG_C_term: methionine--tRNA ligase, beta subunit 582 714 1.2E-41 T 01-11-2018 IPR004495 Methionyl-tRNA synthetase, beta subunit, C-terminal GO:0000166|GO:0004825|GO:0005524|GO:0005737|GO:0006431 KEGG: 00450+6.1.1.10|KEGG: 00970+6.1.1.10 CDA09_03800 f7cbb96208ca71b9d227a73239495c60 714 PRINTS PR01041 Methionyl-tRNA synthetase signature 401 412 2.8E-23 T 01-11-2018 IPR033911 Methioninyl-tRNA synthetase core domain GO:0004825|GO:0006431 KEGG: 00450+6.1.1.10|KEGG: 00970+6.1.1.10 CDA09_03800 f7cbb96208ca71b9d227a73239495c60 714 PRINTS PR01041 Methionyl-tRNA synthetase signature 39 53 2.8E-23 T 01-11-2018 IPR033911 Methioninyl-tRNA synthetase core domain GO:0004825|GO:0006431 KEGG: 00450+6.1.1.10|KEGG: 00970+6.1.1.10 CDA09_03800 f7cbb96208ca71b9d227a73239495c60 714 PRINTS PR01041 Methionyl-tRNA synthetase signature 87 98 2.8E-23 T 01-11-2018 IPR033911 Methioninyl-tRNA synthetase core domain GO:0004825|GO:0006431 KEGG: 00450+6.1.1.10|KEGG: 00970+6.1.1.10 CDA09_03800 f7cbb96208ca71b9d227a73239495c60 714 PRINTS PR01041 Methionyl-tRNA synthetase signature 7 20 2.8E-23 T 01-11-2018 IPR033911 Methioninyl-tRNA synthetase core domain GO:0004825|GO:0006431 KEGG: 00450+6.1.1.10|KEGG: 00970+6.1.1.10 CDA09_03800 f7cbb96208ca71b9d227a73239495c60 714 PRINTS PR01041 Methionyl-tRNA synthetase signature 263 274 2.8E-23 T 01-11-2018 IPR033911 Methioninyl-tRNA synthetase core domain GO:0004825|GO:0006431 KEGG: 00450+6.1.1.10|KEGG: 00970+6.1.1.10 CDA09_03800 f7cbb96208ca71b9d227a73239495c60 714 PRINTS PR01041 Methionyl-tRNA synthetase signature 307 322 2.8E-23 T 01-11-2018 IPR033911 Methioninyl-tRNA synthetase core domain GO:0004825|GO:0006431 KEGG: 00450+6.1.1.10|KEGG: 00970+6.1.1.10 CDA09_03800 f7cbb96208ca71b9d227a73239495c60 714 SUPERFAMILY SSF50249 608 713 2.11E-31 T 01-11-2018 IPR012340 Nucleic acid-binding, OB-fold CDA09_03800 f7cbb96208ca71b9d227a73239495c60 714 TIGRFAM TIGR00398 metG: methionine--tRNA ligase 5 525 7.0E-161 T 01-11-2018 IPR014758 Methionyl-tRNA synthetase GO:0000166|GO:0004825|GO:0005524|GO:0005737|GO:0006431 KEGG: 00450+6.1.1.10|KEGG: 00970+6.1.1.10 CDA09_03800 f7cbb96208ca71b9d227a73239495c60 714 Gene3D G3DSA:1.10.730.10 397 555 1.6E-30 T 01-11-2018 CDA09_03800 f7cbb96208ca71b9d227a73239495c60 714 SUPERFAMILY SSF57770 139 173 9.81E-12 T 01-11-2018 IPR029038 Methionyl-tRNA synthetase, Zn-domain KEGG: 00450+6.1.1.10|KEGG: 00970+6.1.1.10|Reactome: R-HSA-2408517|Reactome: R-HSA-379716 CDA09_03800 f7cbb96208ca71b9d227a73239495c60 714 Gene3D G3DSA:3.40.50.620 5 396 1.1E-139 T 01-11-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold CDA09_03800 f7cbb96208ca71b9d227a73239495c60 714 Gene3D G3DSA:2.40.50.140 599 714 1.1E-33 T 01-11-2018 CDA09_21555 06e7785ec6299207c518cdd18af19f3e 1093 Gene3D G3DSA:3.30.70.1430 597 706 3.2E-236 T 01-11-2018 CDA09_21555 06e7785ec6299207c518cdd18af19f3e 1093 Gene3D G3DSA:3.30.2090.10 757 847 3.2E-236 T 01-11-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains CDA09_21555 06e7785ec6299207c518cdd18af19f3e 1093 SUPERFAMILY SSF82866 903 1083 6.67E-47 T 01-11-2018 CDA09_21555 06e7785ec6299207c518cdd18af19f3e 1093 Gene3D G3DSA:1.20.1640.10 531 1075 3.2E-236 T 01-11-2018 CDA09_21555 06e7785ec6299207c518cdd18af19f3e 1093 SUPERFAMILY SSF82714 189 271 1.2E-17 T 01-11-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains CDA09_21555 06e7785ec6299207c518cdd18af19f3e 1093 SUPERFAMILY SSF82693 48 142 1.92E-18 T 01-11-2018 CDA09_21555 06e7785ec6299207c518cdd18af19f3e 1093 PRINTS PR00702 Acriflavin resistance protein family signature 46 64 7.9E-25 T 01-11-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 CDA09_21555 06e7785ec6299207c518cdd18af19f3e 1093 PRINTS PR00702 Acriflavin resistance protein family signature 461 484 7.9E-25 T 01-11-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 CDA09_21555 06e7785ec6299207c518cdd18af19f3e 1093 PRINTS PR00702 Acriflavin resistance protein family signature 486 509 7.9E-25 T 01-11-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 CDA09_21555 06e7785ec6299207c518cdd18af19f3e 1093 PRINTS PR00702 Acriflavin resistance protein family signature 406 430 7.9E-25 T 01-11-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 CDA09_21555 06e7785ec6299207c518cdd18af19f3e 1093 PRINTS PR00702 Acriflavin resistance protein family signature 352 375 7.9E-25 T 01-11-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 CDA09_21555 06e7785ec6299207c518cdd18af19f3e 1093 SUPERFAMILY SSF82714 756 840 2.49E-10 T 01-11-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains CDA09_21555 06e7785ec6299207c518cdd18af19f3e 1093 SUPERFAMILY SSF82693 142 344 3.66E-10 T 01-11-2018 CDA09_21555 06e7785ec6299207c518cdd18af19f3e 1093 Gene3D G3DSA:3.30.70.1430 48 855 3.2E-236 T 01-11-2018 CDA09_21555 06e7785ec6299207c518cdd18af19f3e 1093 Gene3D G3DSA:1.20.1640.10 21 530 3.2E-236 T 01-11-2018 CDA09_21555 06e7785ec6299207c518cdd18af19f3e 1093 Gene3D G3DSA:3.30.70.1320 142 346 3.2E-236 T 01-11-2018 CDA09_21555 06e7785ec6299207c518cdd18af19f3e 1093 Gene3D G3DSA:3.30.2090.10 186 278 3.2E-236 T 01-11-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains CDA09_21555 06e7785ec6299207c518cdd18af19f3e 1093 SUPERFAMILY SSF82866 312 513 5.23E-32 T 01-11-2018 CDA09_21555 06e7785ec6299207c518cdd18af19f3e 1093 SUPERFAMILY SSF82693 593 692 3.14E-9 T 01-11-2018 CDA09_21555 06e7785ec6299207c518cdd18af19f3e 1093 Gene3D G3DSA:3.30.70.1440 707 920 3.2E-236 T 01-11-2018 CDA09_21555 06e7785ec6299207c518cdd18af19f3e 1093 Pfam PF00873 AcrB/AcrD/AcrF family 21 1077 1.3E-154 T 01-11-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 CDA09_16575 de905c8403ce1067e9fa7cf0856dbf19 246 SMART SM00822 This enzymatic domain is part of bacterial polyketide synthases and catalyses the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain. It uses NADPH to reduce the keto group to a hydroxy group. 4 184 5.4E-4 T 01-11-2018 CDA09_16575 de905c8403ce1067e9fa7cf0856dbf19 246 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 140 168 - T 01-11-2018 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 CDA09_16575 de905c8403ce1067e9fa7cf0856dbf19 246 SUPERFAMILY SSF51735 3 245 5.32E-82 T 01-11-2018 IPR036291 NAD(P)-binding domain superfamily CDA09_16575 de905c8403ce1067e9fa7cf0856dbf19 246 Pfam PF00106 short chain dehydrogenase 4 197 4.7E-64 T 01-11-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CDA09_16575 de905c8403ce1067e9fa7cf0856dbf19 246 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 80 91 2.8E-47 T 01-11-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CDA09_16575 de905c8403ce1067e9fa7cf0856dbf19 246 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 5 22 2.8E-47 T 01-11-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CDA09_16575 de905c8403ce1067e9fa7cf0856dbf19 246 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 174 191 2.8E-47 T 01-11-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CDA09_16575 de905c8403ce1067e9fa7cf0856dbf19 246 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 127 143 2.8E-47 T 01-11-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CDA09_16575 de905c8403ce1067e9fa7cf0856dbf19 246 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 207 227 2.8E-47 T 01-11-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CDA09_16575 de905c8403ce1067e9fa7cf0856dbf19 246 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 153 172 2.8E-47 T 01-11-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CDA09_16575 de905c8403ce1067e9fa7cf0856dbf19 246 TIGRFAM TIGR01829 AcAcCoA_reduct: acetoacetyl-CoA reductase 4 245 2.1E-119 T 01-11-2018 IPR011283 Acetoacetyl-CoA reductase GO:0005737|GO:0018454|GO:0042619|GO:0055114 KEGG: 00630+1.1.1.36|KEGG: 00650+1.1.1.36|MetaCyc: PWY-5676|MetaCyc: PWY-5741|MetaCyc: PWY-7216|MetaCyc: PWY-7948 CDA09_16575 de905c8403ce1067e9fa7cf0856dbf19 246 Gene3D G3DSA:3.40.50.720 1 246 3.4E-82 T 01-11-2018 CDA09_16575 de905c8403ce1067e9fa7cf0856dbf19 246 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 80 91 1.2E-16 T 01-11-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CDA09_16575 de905c8403ce1067e9fa7cf0856dbf19 246 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 153 172 1.2E-16 T 01-11-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CDA09_16575 de905c8403ce1067e9fa7cf0856dbf19 246 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 133 141 1.2E-16 T 01-11-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CDA09_11125 6208543bbaa401caec7f6117941e8307 156 Pfam PF12225 Methylene-tetrahydrofolate reductase C terminal 39 130 1.3E-27 T 01-11-2018 IPR022026 Methylene-tetrahydrofolate reductase C-terminal CDA09_23020 9b53d0469e363785558179e5840d4f1d 451 SUPERFAMILY SSF52540 77 371 7.43E-45 T 01-11-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CDA09_23020 9b53d0469e363785558179e5840d4f1d 451 Pfam PF12631 MnmE helical domain 127 448 2.4E-54 T 01-11-2018 IPR025867 MnmE, helical domain Reactome: R-HSA-6787450 CDA09_23020 9b53d0469e363785558179e5840d4f1d 451 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 220 343 1.8E-23 T 01-11-2018 IPR005225 Small GTP-binding protein domain GO:0005525 CDA09_23020 9b53d0469e363785558179e5840d4f1d 451 Gene3D G3DSA:3.30.1360.120 2 125 1.2E-42 T 01-11-2018 IPR027266 GTP-binding protein TrmE/Glycine cleavage system T protein, domain 1 GO:0005515 CDA09_23020 9b53d0469e363785558179e5840d4f1d 451 Gene3D G3DSA:1.20.120.430 126 451 4.2E-101 T 01-11-2018 IPR027368 tRNA modification GTPase MnmE domain 2 Reactome: R-HSA-6787450 CDA09_23020 9b53d0469e363785558179e5840d4f1d 451 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 272 287 8.5E-5 T 01-11-2018 IPR006073 GTP binding domain GO:0005525 CDA09_23020 9b53d0469e363785558179e5840d4f1d 451 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 223 243 8.5E-5 T 01-11-2018 IPR006073 GTP binding domain GO:0005525 CDA09_23020 9b53d0469e363785558179e5840d4f1d 451 Gene3D G3DSA:3.40.50.300 221 382 4.2E-101 T 01-11-2018 CDA09_23020 9b53d0469e363785558179e5840d4f1d 451 TIGRFAM TIGR00450 mnmE_trmE_thdF: tRNA modification GTPase TrmE 16 451 8.5E-109 T 01-11-2018 IPR004520 tRNA modification GTPase MnmE GO:0003924|GO:0005525|GO:0005622|GO:0006400 Reactome: R-HSA-6787450 CDA09_23020 9b53d0469e363785558179e5840d4f1d 451 Pfam PF01926 50S ribosome-binding GTPase 222 319 3.7E-23 T 01-11-2018 IPR006073 GTP binding domain GO:0005525 CDA09_23020 9b53d0469e363785558179e5840d4f1d 451 Pfam PF10396 GTP-binding protein TrmE N-terminus 11 124 9.4E-38 T 01-11-2018 IPR018948 GTP-binding protein TrmE, N-terminal Reactome: R-HSA-6787450 CDA09_23020 9b53d0469e363785558179e5840d4f1d 451 Hamap MF_00379 tRNA modification GTPase MnmE [mnmE]. 10 451 32.973 T 01-11-2018 IPR004520 tRNA modification GTPase MnmE GO:0003924|GO:0005525|GO:0005622|GO:0006400 Reactome: R-HSA-6787450 CDA09_18090 601b91552ff914bbc4be097f68502c38 108 SMART SM01323 18 100 1.3E-41 T 01-11-2018 IPR003849 Preprotein translocase YajC CDA09_18090 601b91552ff914bbc4be097f68502c38 108 Pfam PF02699 Preprotein translocase subunit 22 97 4.7E-28 T 01-11-2018 IPR003849 Preprotein translocase YajC CDA09_18090 601b91552ff914bbc4be097f68502c38 108 TIGRFAM TIGR00739 yajC: preprotein translocase, YajC subunit 20 100 3.3E-27 T 01-11-2018 IPR003849 Preprotein translocase YajC CDA09_18090 601b91552ff914bbc4be097f68502c38 108 PRINTS PR01853 Bacterial YajC preprotein translocase signature 58 76 3.3E-15 T 01-11-2018 IPR003849 Preprotein translocase YajC CDA09_18090 601b91552ff914bbc4be097f68502c38 108 PRINTS PR01853 Bacterial YajC preprotein translocase signature 20 40 3.3E-15 T 01-11-2018 IPR003849 Preprotein translocase YajC CDA09_03940 1eb47102e2a4bb36edc8d0710d721f05 469 Pfam PF03951 Glutamine synthetase, beta-Grasp domain 14 95 5.3E-28 T 01-11-2018 IPR008147 Glutamine synthetase, beta-Grasp domain GO:0004356|GO:0006542|GO:0006807 KEGG: 00220+6.3.1.2|KEGG: 00250+6.3.1.2|KEGG: 00630+6.3.1.2|KEGG: 00910+6.3.1.2|MetaCyc: PWY-381|MetaCyc: PWY-5675|MetaCyc: PWY-6549|MetaCyc: PWY-6963|MetaCyc: PWY-6964|Reactome: R-HSA-210455|Reactome: R-HSA-70614 CDA09_03940 1eb47102e2a4bb36edc8d0710d721f05 469 SUPERFAMILY SSF55931 102 468 1.18E-139 T 01-11-2018 IPR014746 Glutamine synthetase/guanido kinase, catalytic domain GO:0003824 CDA09_03940 1eb47102e2a4bb36edc8d0710d721f05 469 SUPERFAMILY SSF54368 3 99 1.44E-33 T 01-11-2018 IPR036651 Glutamine synthetase, N-terminal domain superfamily GO:0004356|GO:0006542|GO:0006807 KEGG: 00220+6.3.1.2|KEGG: 00250+6.3.1.2|KEGG: 00630+6.3.1.2|KEGG: 00910+6.3.1.2|MetaCyc: PWY-381|MetaCyc: PWY-5675|MetaCyc: PWY-6549|MetaCyc: PWY-6963|MetaCyc: PWY-6964 CDA09_03940 1eb47102e2a4bb36edc8d0710d721f05 469 SMART SM01230 102 379 2.9E-146 T 01-11-2018 IPR008146 Glutamine synthetase, catalytic domain GO:0004356|GO:0006807 KEGG: 00220+6.3.1.2|KEGG: 00250+6.3.1.2|KEGG: 00630+6.3.1.2|KEGG: 00910+6.3.1.2|MetaCyc: PWY-381|MetaCyc: PWY-5675|MetaCyc: PWY-6549|MetaCyc: PWY-6963|MetaCyc: PWY-6964 CDA09_03940 1eb47102e2a4bb36edc8d0710d721f05 469 Pfam PF00120 Glutamine synthetase, catalytic domain 103 466 3.5E-138 T 01-11-2018 IPR008146 Glutamine synthetase, catalytic domain GO:0004356|GO:0006807 KEGG: 00220+6.3.1.2|KEGG: 00250+6.3.1.2|KEGG: 00630+6.3.1.2|KEGG: 00910+6.3.1.2|MetaCyc: PWY-381|MetaCyc: PWY-5675|MetaCyc: PWY-6549|MetaCyc: PWY-6963|MetaCyc: PWY-6964 CDA09_03940 1eb47102e2a4bb36edc8d0710d721f05 469 ProSitePatterns PS00181 Glutamine synthetase putative ATP-binding region signature. 259 274 - T 01-11-2018 IPR027303 Glutamine synthetase, glycine-rich site KEGG: 00220+6.3.1.2|KEGG: 00250+6.3.1.2|KEGG: 00630+6.3.1.2|KEGG: 00910+6.3.1.2|MetaCyc: PWY-381|MetaCyc: PWY-5675|MetaCyc: PWY-6549|MetaCyc: PWY-6963|MetaCyc: PWY-6964|Reactome: R-HSA-210455|Reactome: R-HSA-70614 CDA09_03940 1eb47102e2a4bb36edc8d0710d721f05 469 TIGRFAM TIGR00653 GlnA: glutamine synthetase, type I 5 468 1.2E-198 T 01-11-2018 IPR004809 Glutamine synthetase type I GO:0004356|GO:0005737|GO:0009399 KEGG: 00220+6.3.1.2|KEGG: 00250+6.3.1.2|KEGG: 00630+6.3.1.2|KEGG: 00910+6.3.1.2|MetaCyc: PWY-381|MetaCyc: PWY-5675|MetaCyc: PWY-6549|MetaCyc: PWY-6963|MetaCyc: PWY-6964 CDA09_03940 1eb47102e2a4bb36edc8d0710d721f05 469 ProSitePatterns PS00182 Glutamine synthetase class-I adenylation site. 386 398 - T 01-11-2018 IPR001637 Glutamine synthetase class-I, adenylation site KEGG: 00220+6.3.1.2|KEGG: 00250+6.3.1.2|KEGG: 00630+6.3.1.2|KEGG: 00910+6.3.1.2|MetaCyc: PWY-381|MetaCyc: PWY-5675|MetaCyc: PWY-6549|MetaCyc: PWY-6963|MetaCyc: PWY-6964 CDA09_03940 1eb47102e2a4bb36edc8d0710d721f05 469 ProSitePatterns PS00180 Glutamine synthetase signature 1. 50 68 - T 01-11-2018 IPR027302 Glutamine synthetase, N-terminal conserved site KEGG: 00220+6.3.1.2|KEGG: 00250+6.3.1.2|KEGG: 00630+6.3.1.2|KEGG: 00910+6.3.1.2|MetaCyc: PWY-381|MetaCyc: PWY-5675|MetaCyc: PWY-6549|MetaCyc: PWY-6963|MetaCyc: PWY-6964|Reactome: R-HSA-210455|Reactome: R-HSA-70614 CDA09_03940 1eb47102e2a4bb36edc8d0710d721f05 469 Gene3D G3DSA:3.10.20.70 2 104 6.1E-35 T 01-11-2018 IPR036651 Glutamine synthetase, N-terminal domain superfamily GO:0004356|GO:0006542|GO:0006807 KEGG: 00220+6.3.1.2|KEGG: 00250+6.3.1.2|KEGG: 00630+6.3.1.2|KEGG: 00910+6.3.1.2|MetaCyc: PWY-381|MetaCyc: PWY-5675|MetaCyc: PWY-6549|MetaCyc: PWY-6963|MetaCyc: PWY-6964 CDA09_03940 1eb47102e2a4bb36edc8d0710d721f05 469 Gene3D G3DSA:3.30.590.10 105 457 4.1E-148 T 01-11-2018 CDA09_18295 ebcd987eace9562fc3dd32eff96dc26b 453 TIGRFAM TIGR00514 accC: acetyl-CoA carboxylase, biotin carboxylase subunit 1 445 2.5E-226 T 01-11-2018 IPR004549 Acetyl-CoA carboxylase, biotin carboxylase GO:0016874 CDA09_18295 ebcd987eace9562fc3dd32eff96dc26b 453 Gene3D G3DSA:3.30.470.20 87 433 2.1E-152 T 01-11-2018 CDA09_18295 ebcd987eace9562fc3dd32eff96dc26b 453 Gene3D G3DSA:3.30.1490.20 131 203 2.1E-152 T 01-11-2018 IPR013815 ATP-grasp fold, subdomain 1 GO:0005524 CDA09_18295 ebcd987eace9562fc3dd32eff96dc26b 453 SUPERFAMILY SSF51246 331 443 6.28E-43 T 01-11-2018 IPR011054 Rudiment single hybrid motif Reactome: R-HSA-196780 CDA09_18295 ebcd987eace9562fc3dd32eff96dc26b 453 ProSitePatterns PS00866 Carbamoyl-phosphate synthase subdomain signature 1. 154 168 - T 01-11-2018 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 CDA09_18295 ebcd987eace9562fc3dd32eff96dc26b 453 SUPERFAMILY SSF56059 83 352 1.01E-70 T 01-11-2018 CDA09_18295 ebcd987eace9562fc3dd32eff96dc26b 453 ProSitePatterns PS00867 Carbamoyl-phosphate synthase subdomain signature 2. 286 293 - T 01-11-2018 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 CDA09_18295 ebcd987eace9562fc3dd32eff96dc26b 453 Gene3D G3DSA:3.40.50.20 1 85 7.3E-34 T 01-11-2018 CDA09_18295 ebcd987eace9562fc3dd32eff96dc26b 453 SUPERFAMILY SSF52440 1 113 1.15E-46 T 01-11-2018 IPR016185 Pre-ATP-grasp domain superfamily CDA09_18295 ebcd987eace9562fc3dd32eff96dc26b 453 Pfam PF02785 Biotin carboxylase C-terminal domain 336 441 1.9E-38 T 01-11-2018 IPR005482 Biotin carboxylase, C-terminal Reactome: R-HSA-196780|Reactome: R-HSA-3371599 CDA09_18295 ebcd987eace9562fc3dd32eff96dc26b 453 SMART SM00878 336 441 6.5E-66 T 01-11-2018 IPR005482 Biotin carboxylase, C-terminal Reactome: R-HSA-196780|Reactome: R-HSA-3371599 CDA09_18295 ebcd987eace9562fc3dd32eff96dc26b 453 Pfam PF00289 Biotin carboxylase, N-terminal domain 1 110 2.3E-44 T 01-11-2018 IPR005481 Biotin carboxylase-like, N-terminal domain Reactome: R-HSA-196780|Reactome: R-HSA-3371599 CDA09_18295 ebcd987eace9562fc3dd32eff96dc26b 453 Pfam PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain 115 321 3.7E-82 T 01-11-2018 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 CDA09_01450 fb1ffc29876387d7a82049a53d0002cd 351 Pfam PF00639 PPIC-type PPIASE domain 198 289 1.7E-13 T 01-11-2018 IPR000297 Peptidyl-prolyl cis-trans isomerase, PpiC-type GO:0003755 CDA09_01450 fb1ffc29876387d7a82049a53d0002cd 351 SUPERFAMILY SSF54534 182 288 6.54E-19 T 01-11-2018 CDA09_01450 fb1ffc29876387d7a82049a53d0002cd 351 SUPERFAMILY SSF109998 48 219 1.53E-17 T 01-11-2018 IPR027304 Trigger factor/SurA domain superfamily CDA09_01450 fb1ffc29876387d7a82049a53d0002cd 351 Gene3D G3DSA:3.10.50.40 190 293 1.6E-40 T 01-11-2018 CDA09_01450 fb1ffc29876387d7a82049a53d0002cd 351 Pfam PF13624 SurA N-terminal domain 4 127 1.7E-8 T 01-11-2018 CDA09_01450 fb1ffc29876387d7a82049a53d0002cd 351 ProSitePatterns PS01096 PpiC-type peptidyl-prolyl cis-trans isomerase signature. 231 251 - T 01-11-2018 IPR023058 Peptidyl-prolyl cis-trans isomerase, PpiC-type, conserved site Reactome: R-HSA-1169408|Reactome: R-HSA-6804756|Reactome: R-HSA-6811555|Reactome: R-HSA-936440 CDA09_01450 fb1ffc29876387d7a82049a53d0002cd 351 Gene3D G3DSA:1.10.4030.30 51 302 1.6E-40 T 01-11-2018 CDA09_20260 b6203fe457818e787f8eaf8c6d3e366c 183 Pfam PF01569 PAP2 superfamily 60 170 2.3E-14 T 01-11-2018 IPR000326 Phosphatidic acid phosphatase type 2/haloperoxidase CDA09_20260 b6203fe457818e787f8eaf8c6d3e366c 183 Gene3D G3DSA:1.20.144.10 86 175 1.9E-16 T 01-11-2018 CDA09_20260 b6203fe457818e787f8eaf8c6d3e366c 183 SMART SM00014 56 166 1.1E-8 T 01-11-2018 IPR000326 Phosphatidic acid phosphatase type 2/haloperoxidase CDA09_20260 b6203fe457818e787f8eaf8c6d3e366c 183 SUPERFAMILY SSF48317 2 170 4.06E-31 T 01-11-2018 IPR036938 Phosphatidic acid phosphatase type 2/haloperoxidase superfamily CDA09_11990 04691ce6781a870734852435bb0f80ec 485 ProSitePatterns PS00676 Sigma-54 interaction domain ATP-binding region B signature. 245 260 - T 01-11-2018 IPR025943 Sigma-54 interaction domain, ATP-binding site 2 CDA09_11990 04691ce6781a870734852435bb0f80ec 485 ProSitePatterns PS00688 Sigma-54 interaction domain C-terminal part signature. 372 381 - T 01-11-2018 IPR025944 Sigma-54 interaction domain, conserved site CDA09_11990 04691ce6781a870734852435bb0f80ec 485 Pfam PF00072 Response regulator receiver domain 21 130 5.4E-24 T 01-11-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 CDA09_11990 04691ce6781a870734852435bb0f80ec 485 Gene3D G3DSA:3.40.50.300 152 330 4.6E-60 T 01-11-2018 CDA09_11990 04691ce6781a870734852435bb0f80ec 485 Gene3D G3DSA:1.10.10.60 410 468 6.3E-16 T 01-11-2018 CDA09_11990 04691ce6781a870734852435bb0f80ec 485 Gene3D G3DSA:1.10.8.60 331 406 1.1E-23 T 01-11-2018 CDA09_11990 04691ce6781a870734852435bb0f80ec 485 Pfam PF00158 Sigma-54 interaction domain 158 325 3.0E-64 T 01-11-2018 IPR002078 RNA polymerase sigma factor 54 interaction domain GO:0005524|GO:0006355|GO:0008134 CDA09_11990 04691ce6781a870734852435bb0f80ec 485 Gene3D G3DSA:3.40.50.2300 17 151 5.6E-34 T 01-11-2018 CDA09_11990 04691ce6781a870734852435bb0f80ec 485 Pfam PF02954 Bacterial regulatory protein, Fis family 425 466 1.8E-13 T 01-11-2018 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 CDA09_11990 04691ce6781a870734852435bb0f80ec 485 SMART SM00382 179 326 9.3E-8 T 01-11-2018 IPR003593 AAA+ ATPase domain CDA09_11990 04691ce6781a870734852435bb0f80ec 485 SUPERFAMILY SSF52172 20 203 1.38E-41 T 01-11-2018 IPR011006 CheY-like superfamily CDA09_11990 04691ce6781a870734852435bb0f80ec 485 SUPERFAMILY SSF46689 372 468 1.7E-17 T 01-11-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 CDA09_11990 04691ce6781a870734852435bb0f80ec 485 SUPERFAMILY SSF52540 158 401 3.9E-67 T 01-11-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CDA09_11990 04691ce6781a870734852435bb0f80ec 485 PRINTS PR01590 FIS bacterial regulatory protein HTH signature 432 449 8.4E-10 T 01-11-2018 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 CDA09_11990 04691ce6781a870734852435bb0f80ec 485 PRINTS PR01590 FIS bacterial regulatory protein HTH signature 449 469 8.4E-10 T 01-11-2018 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 CDA09_11990 04691ce6781a870734852435bb0f80ec 485 SMART SM00448 19 130 1.1E-29 T 01-11-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 CDA09_12255 760f3acfd4f6c879177af8bdfe3f24f1 236 Gene3D G3DSA:3.40.50.300 1 235 1.9E-62 T 01-11-2018 CDA09_12255 760f3acfd4f6c879177af8bdfe3f24f1 236 ProSitePatterns PS00211 ABC transporters family signature. 134 148 - T 01-11-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 CDA09_12255 760f3acfd4f6c879177af8bdfe3f24f1 236 SMART SM00382 26 226 2.3E-4 T 01-11-2018 IPR003593 AAA+ ATPase domain CDA09_12255 760f3acfd4f6c879177af8bdfe3f24f1 236 SUPERFAMILY SSF52540 2 232 6.69E-61 T 01-11-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CDA09_12255 760f3acfd4f6c879177af8bdfe3f24f1 236 PIRSF PIRSF039137 1 235 1.5E-101 T 01-11-2018 IPR030660 High-affinity branched-chain amino acid transport ATP-binding protein GO:0015658|GO:0015803 CDA09_12255 760f3acfd4f6c879177af8bdfe3f24f1 236 Pfam PF00005 ABC transporter 17 161 1.5E-29 T 01-11-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 CDA09_02960 fa0d088ba870a89d2a0f6d2d6fb642ab 172 Gene3D G3DSA:3.30.700.10 22 96 9.3E-12 T 01-11-2018 CDA09_02960 fa0d088ba870a89d2a0f6d2d6fb642ab 172 TIGRFAM TIGR02532 IV_pilin_GFxxxE: prepilin-type N-terminal cleavage/methylation domain 20 42 2.0E-8 T 01-11-2018 IPR012902 Prokaryotic N-terminal methylation site CDA09_02960 fa0d088ba870a89d2a0f6d2d6fb642ab 172 Pfam PF07963 Prokaryotic N-terminal methylation motif 19 42 3.4E-7 T 01-11-2018 IPR012902 Prokaryotic N-terminal methylation site CDA09_02960 fa0d088ba870a89d2a0f6d2d6fb642ab 172 SUPERFAMILY SSF54523 22 140 9.42E-18 T 01-11-2018 CDA09_02960 fa0d088ba870a89d2a0f6d2d6fb642ab 172 PRINTS PR00813 Bacterial general secretion pathway protein G signature 57 75 4.9E-6 T 01-11-2018 IPR000983 Bacterial general secretion pathway protein G-type pilin GO:0008565|GO:0015627|GO:0015628 CDA09_02960 fa0d088ba870a89d2a0f6d2d6fb642ab 172 PRINTS PR00813 Bacterial general secretion pathway protein G signature 21 46 4.9E-6 T 01-11-2018 IPR000983 Bacterial general secretion pathway protein G-type pilin GO:0008565|GO:0015627|GO:0015628 CDA09_02960 fa0d088ba870a89d2a0f6d2d6fb642ab 172 ProSitePatterns PS00409 Prokaryotic N-terminal methylation site. 20 40 - T 01-11-2018 IPR012902 Prokaryotic N-terminal methylation site CDA09_03125 a8226b4ad441bebbf8776893e179d8e2 248 SUPERFAMILY SSF51182 16 242 1.78E-53 T 01-11-2018 IPR011051 RmlC-like cupin domain superfamily CDA09_03125 a8226b4ad441bebbf8776893e179d8e2 248 Pfam PF02678 Pirin 24 125 4.9E-25 T 01-11-2018 IPR003829 Pirin, N-terminal domain Reactome: R-HSA-8935690 CDA09_03125 a8226b4ad441bebbf8776893e179d8e2 248 Gene3D G3DSA:2.60.120.10 142 242 3.0E-64 T 01-11-2018 IPR014710 RmlC-like jelly roll fold CDA09_03125 a8226b4ad441bebbf8776893e179d8e2 248 PIRSF PIRSF006232 10 247 2.1E-42 T 01-11-2018 IPR012093 Pirin Reactome: R-HSA-8935690 CDA09_03125 a8226b4ad441bebbf8776893e179d8e2 248 Gene3D G3DSA:2.60.120.10 24 141 3.0E-64 T 01-11-2018 IPR014710 RmlC-like jelly roll fold CDA09_00130 8573c8cda769e31530dda41d0837b7a1 385 SUPERFAMILY SSF109604 137 301 4.71E-21 T 01-11-2018 CDA09_00130 8573c8cda769e31530dda41d0837b7a1 385 Gene3D G3DSA:1.10.3210.10 23 305 1.1E-42 T 01-11-2018 CDA09_00130 8573c8cda769e31530dda41d0837b7a1 385 SMART SM00471 139 275 3.8E-4 T 01-11-2018 IPR003607 HD/PDEase domain CDA09_00130 8573c8cda769e31530dda41d0837b7a1 385 Pfam PF13487 HD domain 196 257 8.7E-12 T 01-11-2018 CDA09_00005 f6f81a9f87c954f1384564c7d79de31c 38 TIGRFAM TIGR01030 rpmH_bact: ribosomal protein bL34 1 38 1.1E-18 T 01-11-2018 IPR000271 Ribosomal protein L34 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 CDA09_00005 f6f81a9f87c954f1384564c7d79de31c 38 ProDom PD003101 RIBOSOMAL L34 RIBONUCLEOPROTEIN 50S CHLOROPLAST PLASTID L34 MITOCHONDRIAL PEPTIDE SEQUENCING 1 18 0.005 T 01-11-2018 IPR000271 Ribosomal protein L34 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 CDA09_00005 f6f81a9f87c954f1384564c7d79de31c 38 Pfam PF00468 Ribosomal protein L34 1 38 1.4E-17 T 01-11-2018 IPR000271 Ribosomal protein L34 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 CDA09_09035 122b45d1d22f8dcff59b9f66f72d6024 142 Pfam PF01796 DUF35 OB-fold domain, acyl-CoA-associated 69 128 2.1E-15 T 01-11-2018 IPR002878 Domain of unknown function DUF35, OB-fold, C-terminal CDA09_09035 122b45d1d22f8dcff59b9f66f72d6024 142 SUPERFAMILY SSF50249 15 134 3.08E-32 T 01-11-2018 IPR012340 Nucleic acid-binding, OB-fold CDA09_09035 122b45d1d22f8dcff59b9f66f72d6024 142 Gene3D G3DSA:1.10.12.20 21 67 3.5E-7 T 01-11-2018 CDA09_09035 122b45d1d22f8dcff59b9f66f72d6024 142 Pfam PF12172 Rubredoxin-like zinc ribbon domain (DUF35_N) 30 64 2.2E-11 T 01-11-2018 IPR022002 Domain of unknown function DUF35, rubredoxin-like zinc ribbon domain, N-terminal CDA09_14430 e958e7100136ff134337ec242dbda64c 307 Gene3D G3DSA:3.40.50.2300 126 294 7.6E-21 T 01-11-2018 CDA09_14430 e958e7100136ff134337ec242dbda64c 307 Gene3D G3DSA:3.40.50.2300 62 274 7.6E-21 T 01-11-2018 CDA09_14430 e958e7100136ff134337ec242dbda64c 307 Pfam PF04392 ABC transporter substrate binding protein 72 254 1.4E-9 T 01-11-2018 IPR007487 ABC transporter, substrate-binding protein CDA09_22615 f126c4f210d6ebff1343781a9f817c49 443 Pfam PF06808 Tripartite ATP-independent periplasmic transporter, DctM component 11 433 7.6E-86 T 01-11-2018 IPR010656 TRAP C4-dicarboxylate transport system permease DctM subunit CDA09_22615 f126c4f210d6ebff1343781a9f817c49 443 PIRSF PIRSF006066 6 443 3.4E-78 T 01-11-2018 IPR004681 TRAP transporter large membrane protein DctM GO:0016021 CDA09_22615 f126c4f210d6ebff1343781a9f817c49 443 TIGRFAM TIGR00786 dctM: TRAP transporter, DctM subunit 24 437 7.2E-89 T 01-11-2018 IPR004681 TRAP transporter large membrane protein DctM GO:0016021 CDA09_04530 808395d443664f96d4adddd740a7714a 280 SUPERFAMILY SSF51395 22 274 8.14E-31 T 01-11-2018 CDA09_04530 808395d443664f96d4adddd740a7714a 280 Pfam PF01180 Dihydroorotate dehydrogenase 43 83 1.1E-4 T 01-11-2018 IPR005720 Dihydroorotate dehydrogenase domain GO:0005737|GO:0016627|GO:0055114 CDA09_04530 808395d443664f96d4adddd740a7714a 280 Pfam PF01180 Dihydroorotate dehydrogenase 209 271 2.0E-7 T 01-11-2018 IPR005720 Dihydroorotate dehydrogenase domain GO:0005737|GO:0016627|GO:0055114 CDA09_04530 808395d443664f96d4adddd740a7714a 280 Gene3D G3DSA:3.20.20.70 91 275 1.6E-16 T 01-11-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 CDA09_04530 808395d443664f96d4adddd740a7714a 280 Gene3D G3DSA:3.20.20.70 11 90 1.1E-10 T 01-11-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 CDA09_04530 808395d443664f96d4adddd740a7714a 280 ProSitePatterns PS00912 Dihydroorotate dehydrogenase signature 2. 233 253 - T 01-11-2018 IPR001295 Dihydroorotate dehydrogenase, conserved site GO:0004152|GO:0006207|GO:0055114 Reactome: R-HSA-500753 CDA09_04530 808395d443664f96d4adddd740a7714a 280 PIRSF PIRSF000164 90 277 1.3E-8 T 01-11-2018 IPR012135 Dihydroorotate dehydrogenase, class 1/ 2 GO:0004152|GO:0006222|GO:0055114 CDA09_04530 808395d443664f96d4adddd740a7714a 280 PIRSF PIRSF000164 18 93 1.5E-6 T 01-11-2018 IPR012135 Dihydroorotate dehydrogenase, class 1/ 2 GO:0004152|GO:0006222|GO:0055114 CDA09_04715 bfeea100e39c316de23ae50f49aa1608 397 Gene3D G3DSA:2.40.110.10 127 237 2.9E-29 T 01-11-2018 CDA09_04715 bfeea100e39c316de23ae50f49aa1608 397 Pfam PF02771 Acyl-CoA dehydrogenase, N-terminal domain 8 123 2.0E-17 T 01-11-2018 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal GO:0016627|GO:0050660|GO:0055114 CDA09_04715 bfeea100e39c316de23ae50f49aa1608 397 Pfam PF00441 Acyl-CoA dehydrogenase, C-terminal domain 234 381 1.5E-38 T 01-11-2018 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal GO:0016627|GO:0055114 CDA09_04715 bfeea100e39c316de23ae50f49aa1608 397 Pfam PF02770 Acyl-CoA dehydrogenase, middle domain 128 205 1.5E-15 T 01-11-2018 IPR006091 Acyl-CoA oxidase/dehydrogenase, central domain GO:0016627|GO:0055114 CDA09_04715 bfeea100e39c316de23ae50f49aa1608 397 Gene3D G3DSA:1.10.540.10 1 126 1.3E-34 T 01-11-2018 IPR037069 Acyl-CoA dehydrogenase/oxidase, N-terminal domain superfamily GO:0016627|GO:0050660|GO:0055114 CDA09_04715 bfeea100e39c316de23ae50f49aa1608 397 Gene3D G3DSA:1.20.140.10 238 383 1.4E-39 T 01-11-2018 CDA09_04715 bfeea100e39c316de23ae50f49aa1608 397 SUPERFAMILY SSF47203 232 382 4.67E-45 T 01-11-2018 IPR036250 Acyl-CoA dehydrogenase-like, C-terminal GO:0016627|GO:0055114 CDA09_04715 bfeea100e39c316de23ae50f49aa1608 397 SUPERFAMILY SSF56645 1 245 1.7E-57 T 01-11-2018 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain superfamily GO:0016627|GO:0055114 CDA09_04715 bfeea100e39c316de23ae50f49aa1608 397 ProSitePatterns PS00073 Acyl-CoA dehydrogenases signature 2. 341 360 - T 01-11-2018 IPR006089 Acyl-CoA dehydrogenase, conserved site GO:0003995|GO:0055114 CDA09_12760 0aff67eb7eea856fe1ba1544cffa2e61 249 Gene3D G3DSA:3.40.50.620 1 248 7.5E-89 T 01-11-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold CDA09_12760 0aff67eb7eea856fe1ba1544cffa2e61 249 SUPERFAMILY SSF52402 1 242 1.95E-85 T 01-11-2018 CDA09_12760 0aff67eb7eea856fe1ba1544cffa2e61 249 PIRSF PIRSF000090 1 249 5.1E-85 T 01-11-2018 IPR012255 Electron transfer flavoprotein, beta subunit GO:0009055 Reactome: R-HSA-611105|Reactome: R-HSA-8876725 CDA09_12760 0aff67eb7eea856fe1ba1544cffa2e61 249 SMART SM00893 23 211 3.8E-70 T 01-11-2018 IPR014730 Electron transfer flavoprotein, alpha/beta-subunit, N-terminal Reactome: R-HSA-611105 CDA09_12760 0aff67eb7eea856fe1ba1544cffa2e61 249 ProSitePatterns PS01065 Electron transfer flavoprotein beta-subunit signature. 155 175 - T 01-11-2018 IPR000049 Electron transfer flavoprotein, beta-subunit, conserved site GO:0009055 Reactome: R-HSA-611105|Reactome: R-HSA-8876725 CDA09_12760 0aff67eb7eea856fe1ba1544cffa2e61 249 Pfam PF01012 Electron transfer flavoprotein domain 28 206 8.8E-47 T 01-11-2018 IPR014730 Electron transfer flavoprotein, alpha/beta-subunit, N-terminal Reactome: R-HSA-611105 CDA09_10540 0ca1787234590e1f54559d7ab5659fdc 321 SUPERFAMILY SSF53850 90 299 2.95E-44 T 01-11-2018 CDA09_10540 0ca1787234590e1f54559d7ab5659fdc 321 Gene3D G3DSA:3.40.190.10 94 294 4.5E-57 T 01-11-2018 CDA09_10540 0ca1787234590e1f54559d7ab5659fdc 321 SUPERFAMILY SSF46785 6 114 3.46E-23 T 01-11-2018 IPR036390 Winged helix DNA-binding domain superfamily CDA09_10540 0ca1787234590e1f54559d7ab5659fdc 321 Gene3D G3DSA:1.10.10.10 4 92 2.7E-23 T 01-11-2018 IPR036388 Winged helix-like DNA-binding domain superfamily CDA09_10540 0ca1787234590e1f54559d7ab5659fdc 321 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 7 65 9.1E-19 T 01-11-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 CDA09_10540 0ca1787234590e1f54559d7ab5659fdc 321 Gene3D G3DSA:3.40.190.10 165 267 4.5E-57 T 01-11-2018 CDA09_10540 0ca1787234590e1f54559d7ab5659fdc 321 Pfam PF03466 LysR substrate binding domain 90 296 5.2E-39 T 01-11-2018 IPR005119 LysR, substrate-binding CDA09_15240 f340efb05d53db02f11e1a3813f75185 474 SUPERFAMILY SSF50156 226 350 1.97E-21 T 01-11-2018 IPR036034 PDZ superfamily GO:0005515 CDA09_15240 f340efb05d53db02f11e1a3813f75185 474 Pfam PF13365 Trypsin-like peptidase domain 96 229 4.5E-35 T 01-11-2018 CDA09_15240 f340efb05d53db02f11e1a3813f75185 474 Gene3D G3DSA:2.30.42.10 388 474 2.7E-8 T 01-11-2018 CDA09_15240 f340efb05d53db02f11e1a3813f75185 474 SUPERFAMILY SSF50494 32 259 4.01E-65 T 01-11-2018 IPR009003 Peptidase S1, PA clan CDA09_15240 f340efb05d53db02f11e1a3813f75185 474 Gene3D G3DSA:2.30.42.10 263 368 1.3E-25 T 01-11-2018 CDA09_15240 f340efb05d53db02f11e1a3813f75185 474 SMART SM00228 268 350 5.6E-8 T 01-11-2018 IPR001478 PDZ domain GO:0005515 CDA09_15240 f340efb05d53db02f11e1a3813f75185 474 SMART SM00228 381 463 0.0042 T 01-11-2018 IPR001478 PDZ domain GO:0005515 CDA09_15240 f340efb05d53db02f11e1a3813f75185 474 SUPERFAMILY SSF50156 401 471 1.45E-6 T 01-11-2018 IPR036034 PDZ superfamily GO:0005515 CDA09_15240 f340efb05d53db02f11e1a3813f75185 474 Pfam PF13180 PDZ domain 268 359 2.1E-16 T 01-11-2018 IPR001478 PDZ domain GO:0005515 CDA09_15240 f340efb05d53db02f11e1a3813f75185 474 Gene3D G3DSA:2.40.10.120 32 261 6.6E-81 T 01-11-2018 CDA09_15240 f340efb05d53db02f11e1a3813f75185 474 TIGRFAM TIGR02037 degP_htrA_DO: peptidase Do 33 469 1.3E-140 T 01-11-2018 IPR011782 Peptidase S1C, Do GO:0004252|GO:0006508 CDA09_15240 f340efb05d53db02f11e1a3813f75185 474 PRINTS PR00834 HtrA/DegQ protease family signature 126 146 3.2E-49 T 01-11-2018 IPR001940 Peptidase S1C GO:0004252|GO:0006508 CDA09_15240 f340efb05d53db02f11e1a3813f75185 474 PRINTS PR00834 HtrA/DegQ protease family signature 222 239 3.2E-49 T 01-11-2018 IPR001940 Peptidase S1C GO:0004252|GO:0006508 CDA09_15240 f340efb05d53db02f11e1a3813f75185 474 PRINTS PR00834 HtrA/DegQ protease family signature 105 117 3.2E-49 T 01-11-2018 IPR001940 Peptidase S1C GO:0004252|GO:0006508 CDA09_15240 f340efb05d53db02f11e1a3813f75185 474 PRINTS PR00834 HtrA/DegQ protease family signature 166 190 3.2E-49 T 01-11-2018 IPR001940 Peptidase S1C GO:0004252|GO:0006508 CDA09_15240 f340efb05d53db02f11e1a3813f75185 474 PRINTS PR00834 HtrA/DegQ protease family signature 200 217 3.2E-49 T 01-11-2018 IPR001940 Peptidase S1C GO:0004252|GO:0006508 CDA09_15240 f340efb05d53db02f11e1a3813f75185 474 PRINTS PR00834 HtrA/DegQ protease family signature 308 320 3.2E-49 T 01-11-2018 IPR001940 Peptidase S1C GO:0004252|GO:0006508 CDA09_20250 c3041d716f7ea4aed358a8acd294e55f 128 SUPERFAMILY SSF52833 16 126 4.15E-24 T 01-11-2018 IPR036249 Thioredoxin-like superfamily CDA09_20250 c3041d716f7ea4aed358a8acd294e55f 128 Gene3D G3DSA:3.40.30.10 17 128 6.6E-21 T 01-11-2018 CDA09_20250 c3041d716f7ea4aed358a8acd294e55f 128 Pfam PF00085 Thioredoxin 25 125 2.6E-15 T 01-11-2018 IPR013766 Thioredoxin domain GO:0045454 CDA09_20250 c3041d716f7ea4aed358a8acd294e55f 128 ProSitePatterns PS00194 Thioredoxin family active site. 43 61 - T 01-11-2018 IPR017937 Thioredoxin, conserved site GO:0045454 CDA09_21830 d1b2596d00358a1810460f259e31e78e 445 Gene3D G3DSA:3.40.50.11900 323 442 9.6E-9 T 01-11-2018 CDA09_21830 d1b2596d00358a1810460f259e31e78e 445 Pfam PF06050 2-hydroxyglutaryl-CoA dehydratase, D-component 54 432 4.0E-51 T 01-11-2018 IPR010327 FldB/FldC dehydratase alpha/beta subunit CDA09_03315 268c0459b94e39bf259db247d3179d7b 142 Gene3D G3DSA:3.10.50.40 14 139 3.1E-36 T 01-11-2018 CDA09_03315 268c0459b94e39bf259db247d3179d7b 142 Pfam PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase 3 138 1.0E-11 T 01-11-2018 IPR001179 FKBP-type peptidyl-prolyl cis-trans isomerase domain CDA09_03315 268c0459b94e39bf259db247d3179d7b 142 Gene3D G3DSA:2.40.10.330 72 127 3.1E-36 T 01-11-2018 CDA09_03315 268c0459b94e39bf259db247d3179d7b 142 SUPERFAMILY SSF54534 5 141 7.66E-35 T 01-11-2018 CDA09_16295 d6eab8ad8e08fe8946b7a8c01e6b13ce 1075 SUPERFAMILY SSF56059 128 401 1.15E-110 T 01-11-2018 CDA09_16295 d6eab8ad8e08fe8946b7a8c01e6b13ce 1075 ProSitePatterns PS00867 Carbamoyl-phosphate synthase subdomain signature 2. 837 844 - T 01-11-2018 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 CDA09_16295 d6eab8ad8e08fe8946b7a8c01e6b13ce 1075 Gene3D G3DSA:3.40.50.1380 935 1072 2.0E-34 T 01-11-2018 IPR036914 Methylglyoxal synthase-like domain superfamily CDA09_16295 d6eab8ad8e08fe8946b7a8c01e6b13ce 1075 SMART SM00851 954 1041 7.2E-29 T 01-11-2018 IPR011607 Methylglyoxal synthase-like domain CDA09_16295 d6eab8ad8e08fe8946b7a8c01e6b13ce 1075 ProSitePatterns PS00866 Carbamoyl-phosphate synthase subdomain signature 1. 704 718 - T 01-11-2018 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 CDA09_16295 d6eab8ad8e08fe8946b7a8c01e6b13ce 1075 Pfam PF02142 MGS-like domain 955 1040 2.5E-20 T 01-11-2018 IPR011607 Methylglyoxal synthase-like domain CDA09_16295 d6eab8ad8e08fe8946b7a8c01e6b13ce 1075 ProSitePatterns PS00867 Carbamoyl-phosphate synthase subdomain signature 2. 297 304 - T 01-11-2018 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 CDA09_16295 d6eab8ad8e08fe8946b7a8c01e6b13ce 1075 ProSitePatterns PS00866 Carbamoyl-phosphate synthase subdomain signature 1. 164 178 - T 01-11-2018 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 CDA09_16295 d6eab8ad8e08fe8946b7a8c01e6b13ce 1075 Gene3D G3DSA:3.30.470.20 660 934 4.2E-119 T 01-11-2018 CDA09_16295 d6eab8ad8e08fe8946b7a8c01e6b13ce 1075 SUPERFAMILY SSF52440 1 127 1.01E-50 T 01-11-2018 IPR016185 Pre-ATP-grasp domain superfamily CDA09_16295 d6eab8ad8e08fe8946b7a8c01e6b13ce 1075 Gene3D G3DSA:1.10.1030.10 404 548 1.1E-47 T 01-11-2018 IPR036897 Carbamoyl-phosphate synthetase, large subunit oligomerisation domain superfamily KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 CDA09_16295 d6eab8ad8e08fe8946b7a8c01e6b13ce 1075 Hamap MF_01210_B Carbamoyl-phosphate synthase large chain [carB]. 1 1062 13.207 T 01-11-2018 IPR006275 Carbamoyl-phosphate synthase, large subunit GO:0006807 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 CDA09_16295 d6eab8ad8e08fe8946b7a8c01e6b13ce 1075 PRINTS PR00098 Carbamoyl-phosphate synthase protein CPSase domain signature 19 33 3.3E-66 T 01-11-2018 IPR005483 Carbamoyl-phosphate synthase large subunit, CPSase domain GO:0006807 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 CDA09_16295 d6eab8ad8e08fe8946b7a8c01e6b13ce 1075 PRINTS PR00098 Carbamoyl-phosphate synthase protein CPSase domain signature 239 256 3.3E-66 T 01-11-2018 IPR005483 Carbamoyl-phosphate synthase large subunit, CPSase domain GO:0006807 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 CDA09_16295 d6eab8ad8e08fe8946b7a8c01e6b13ce 1075 PRINTS PR00098 Carbamoyl-phosphate synthase protein CPSase domain signature 204 223 3.3E-66 T 01-11-2018 IPR005483 Carbamoyl-phosphate synthase large subunit, CPSase domain GO:0006807 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 CDA09_16295 d6eab8ad8e08fe8946b7a8c01e6b13ce 1075 PRINTS PR00098 Carbamoyl-phosphate synthase protein CPSase domain signature 380 398 3.3E-66 T 01-11-2018 IPR005483 Carbamoyl-phosphate synthase large subunit, CPSase domain GO:0006807 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 CDA09_16295 d6eab8ad8e08fe8946b7a8c01e6b13ce 1075 PRINTS PR00098 Carbamoyl-phosphate synthase protein CPSase domain signature 48 58 3.3E-66 T 01-11-2018 IPR005483 Carbamoyl-phosphate synthase large subunit, CPSase domain GO:0006807 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 CDA09_16295 d6eab8ad8e08fe8946b7a8c01e6b13ce 1075 PRINTS PR00098 Carbamoyl-phosphate synthase protein CPSase domain signature 168 180 3.3E-66 T 01-11-2018 IPR005483 Carbamoyl-phosphate synthase large subunit, CPSase domain GO:0006807 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 CDA09_16295 d6eab8ad8e08fe8946b7a8c01e6b13ce 1075 PRINTS PR00098 Carbamoyl-phosphate synthase protein CPSase domain signature 297 326 3.3E-66 T 01-11-2018 IPR005483 Carbamoyl-phosphate synthase large subunit, CPSase domain GO:0006807 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 CDA09_16295 d6eab8ad8e08fe8946b7a8c01e6b13ce 1075 Gene3D G3DSA:3.40.50.20 1 116 1.6E-50 T 01-11-2018 CDA09_16295 d6eab8ad8e08fe8946b7a8c01e6b13ce 1075 SUPERFAMILY SSF56059 668 932 3.01E-103 T 01-11-2018 CDA09_16295 d6eab8ad8e08fe8946b7a8c01e6b13ce 1075 SUPERFAMILY SSF52440 551 670 1.01E-49 T 01-11-2018 IPR016185 Pre-ATP-grasp domain superfamily CDA09_16295 d6eab8ad8e08fe8946b7a8c01e6b13ce 1075 SUPERFAMILY SSF52335 934 1070 1.83E-36 T 01-11-2018 IPR036914 Methylglyoxal synthase-like domain superfamily CDA09_16295 d6eab8ad8e08fe8946b7a8c01e6b13ce 1075 Pfam PF02787 Carbamoyl-phosphate synthetase large chain, oligomerisation domain 422 542 1.9E-39 T 01-11-2018 IPR005480 Carbamoyl-phosphate synthetase, large subunit oligomerisation domain KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 CDA09_16295 d6eab8ad8e08fe8946b7a8c01e6b13ce 1075 TIGRFAM TIGR01369 CPSaseII_lrg: carbamoyl-phosphate synthase, large subunit 2 1050 0.0 T 01-11-2018 IPR006275 Carbamoyl-phosphate synthase, large subunit GO:0006807 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 CDA09_16295 d6eab8ad8e08fe8946b7a8c01e6b13ce 1075 Pfam PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain 668 873 1.6E-35 T 01-11-2018 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 CDA09_16295 d6eab8ad8e08fe8946b7a8c01e6b13ce 1075 Pfam PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain 128 334 1.1E-73 T 01-11-2018 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 CDA09_16295 d6eab8ad8e08fe8946b7a8c01e6b13ce 1075 SUPERFAMILY SSF48108 396 549 6.02E-52 T 01-11-2018 IPR036897 Carbamoyl-phosphate synthetase, large subunit oligomerisation domain superfamily KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 CDA09_16295 d6eab8ad8e08fe8946b7a8c01e6b13ce 1075 Gene3D G3DSA:3.30.470.20 119 403 2.9E-131 T 01-11-2018 CDA09_16295 d6eab8ad8e08fe8946b7a8c01e6b13ce 1075 SMART SM01096 419 542 4.2E-74 T 01-11-2018 IPR005480 Carbamoyl-phosphate synthetase, large subunit oligomerisation domain KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 CDA09_16295 d6eab8ad8e08fe8946b7a8c01e6b13ce 1075 Gene3D G3DSA:3.40.50.20 549 657 3.9E-49 T 01-11-2018 CDA09_16295 d6eab8ad8e08fe8946b7a8c01e6b13ce 1075 Hamap MF_01210_A Carbamoyl-phosphate synthase large chain [carB]. 5 1074 13.395 T 01-11-2018 IPR006275 Carbamoyl-phosphate synthase, large subunit GO:0006807 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 CDA09_11730 2d67949d59aa7f3f7b40f601f7d683d7 680 Gene3D G3DSA:3.40.50.300 178 332 1.3E-118 T 01-11-2018 CDA09_11730 2d67949d59aa7f3f7b40f601f7d683d7 680 Gene3D G3DSA:3.40.50.300 333 480 1.3E-118 T 01-11-2018 CDA09_11730 2d67949d59aa7f3f7b40f601f7d683d7 680 Gene3D G3DSA:1.20.272.40 174 555 1.3E-118 T 01-11-2018 CDA09_11730 2d67949d59aa7f3f7b40f601f7d683d7 680 SMART SM00490 365 454 6.4E-16 T 01-11-2018 IPR001650 Helicase, C-terminal CDA09_11730 2d67949d59aa7f3f7b40f601f7d683d7 680 SUPERFAMILY SSF52540 189 461 1.78E-33 T 01-11-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CDA09_11730 2d67949d59aa7f3f7b40f601f7d683d7 680 Pfam PF00271 Helicase conserved C-terminal domain 350 454 9.0E-13 T 01-11-2018 IPR001650 Helicase, C-terminal CDA09_11730 2d67949d59aa7f3f7b40f601f7d683d7 680 Pfam PF12513 Mitochondrial degradasome RNA helicase subunit C terminal 598 645 1.9E-11 T 01-11-2018 IPR022192 Mitochondrial degradasome RNA helicase subunit, C-terminal domain GO:0016817 CDA09_11730 2d67949d59aa7f3f7b40f601f7d683d7 680 SMART SM00487 171 350 0.0083 T 01-11-2018 IPR014001 Helicase superfamily 1/2, ATP-binding domain CDA09_11730 2d67949d59aa7f3f7b40f601f7d683d7 680 SMART SM00382 189 332 0.0013 T 01-11-2018 IPR003593 AAA+ ATPase domain CDA09_08420 7f6383735b5cae7f6cc16ba6df96d3ce 142 Pfam PF04891 NifQ 21 131 4.2E-44 T 01-11-2018 IPR006975 NifQ GO:0009399|GO:0030151 CDA09_18415 7f6b2958b2bfa5a20916c57e617eb421 330 SUPERFAMILY SSF53448 4 217 7.22E-30 T 01-11-2018 IPR029044 Nucleotide-diphospho-sugar transferases CDA09_18415 7f6b2958b2bfa5a20916c57e617eb421 330 Gene3D G3DSA:3.90.550.10 1 241 5.8E-36 T 01-11-2018 IPR029044 Nucleotide-diphospho-sugar transferases CDA09_18415 7f6b2958b2bfa5a20916c57e617eb421 330 Pfam PF00535 Glycosyl transferase family 2 6 160 7.7E-18 T 01-11-2018 IPR001173 Glycosyltransferase 2-like Reactome: R-HSA-913709 CDA09_07885 67971dfc3598f14969df60d9de6b24ad 310 Gene3D G3DSA:1.25.40.10 200 309 2.7E-16 T 01-11-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 CDA09_07885 67971dfc3598f14969df60d9de6b24ad 310 Gene3D G3DSA:3.90.70.10 50 199 1.2E-9 T 01-11-2018 CDA09_07885 67971dfc3598f14969df60d9de6b24ad 310 SUPERFAMILY SSF48452 186 292 1.28E-13 T 01-11-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 CDA09_07885 67971dfc3598f14969df60d9de6b24ad 310 Pfam PF13432 Tetratricopeptide repeat 234 295 2.9E-9 T 01-11-2018 CDA09_07885 67971dfc3598f14969df60d9de6b24ad 310 Pfam PF13529 Peptidase_C39 like family 44 153 4.2E-6 T 01-11-2018 IPR039564 Peptidase C39-like CDA09_00105 a93676c3f1e46b12850b64cdb2a957a7 983 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 548 712 3.9E-38 T 01-11-2018 IPR000160 GGDEF domain CDA09_00105 a93676c3f1e46b12850b64cdb2a957a7 983 SUPERFAMILY SSF55785 299 423 1.16E-20 T 01-11-2018 IPR035965 PAS domain superfamily CDA09_00105 a93676c3f1e46b12850b64cdb2a957a7 983 Gene3D G3DSA:3.30.70.270 546 726 4.9E-55 T 01-11-2018 CDA09_00105 a93676c3f1e46b12850b64cdb2a957a7 983 SMART SM00052 723 969 6.5E-121 T 01-11-2018 IPR001633 EAL domain CDA09_00105 a93676c3f1e46b12850b64cdb2a957a7 983 Pfam PF00990 Diguanylate cyclase, GGDEF domain 552 708 2.3E-42 T 01-11-2018 IPR000160 GGDEF domain CDA09_00105 a93676c3f1e46b12850b64cdb2a957a7 983 Gene3D G3DSA:3.30.450.20 429 539 2.6E-24 T 01-11-2018 CDA09_00105 a93676c3f1e46b12850b64cdb2a957a7 983 SUPERFAMILY SSF55785 424 539 3.35E-21 T 01-11-2018 IPR035965 PAS domain superfamily CDA09_00105 a93676c3f1e46b12850b64cdb2a957a7 983 SMART SM00267 541 713 7.3E-51 T 01-11-2018 IPR000160 GGDEF domain CDA09_00105 a93676c3f1e46b12850b64cdb2a957a7 983 SUPERFAMILY SSF55073 557 714 1.2E-43 T 01-11-2018 IPR029787 Nucleotide cyclase CDA09_00105 a93676c3f1e46b12850b64cdb2a957a7 983 Pfam PF00563 EAL domain 730 964 7.5E-71 T 01-11-2018 IPR001633 EAL domain CDA09_00105 a93676c3f1e46b12850b64cdb2a957a7 983 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 309 431 2.2E-15 T 01-11-2018 IPR000014 PAS domain CDA09_00105 a93676c3f1e46b12850b64cdb2a957a7 983 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 427 543 3.6E-20 T 01-11-2018 IPR000014 PAS domain CDA09_00105 a93676c3f1e46b12850b64cdb2a957a7 983 Pfam PF17159 Membrane-associated sensor domain 60 281 4.3E-69 T 01-11-2018 IPR033425 Membrane-associated sensor domain MASE3 CDA09_00105 a93676c3f1e46b12850b64cdb2a957a7 983 SMART SM00091 312 378 2.1E-8 T 01-11-2018 IPR000014 PAS domain CDA09_00105 a93676c3f1e46b12850b64cdb2a957a7 983 SMART SM00091 430 496 6.6E-8 T 01-11-2018 IPR000014 PAS domain CDA09_00105 a93676c3f1e46b12850b64cdb2a957a7 983 Pfam PF08448 PAS fold 319 427 2.8E-21 T 01-11-2018 IPR013656 PAS fold-4 CDA09_00105 a93676c3f1e46b12850b64cdb2a957a7 983 SUPERFAMILY SSF141868 730 976 1.7E-91 T 01-11-2018 IPR035919 EAL domain superfamily CDA09_00105 a93676c3f1e46b12850b64cdb2a957a7 983 Pfam PF00989 PAS fold 432 538 5.6E-12 T 01-11-2018 IPR013767 PAS fold GO:0006355 CDA09_00105 a93676c3f1e46b12850b64cdb2a957a7 983 Gene3D G3DSA:3.20.20.450 727 977 7.1E-103 T 01-11-2018 IPR035919 EAL domain superfamily CDA09_00105 a93676c3f1e46b12850b64cdb2a957a7 983 Gene3D G3DSA:3.30.450.20 298 428 1.5E-27 T 01-11-2018 CDA09_00105 a93676c3f1e46b12850b64cdb2a957a7 983 SMART SM00086 501 541 0.56 T 01-11-2018 IPR001610 PAC motif CDA09_00105 a93676c3f1e46b12850b64cdb2a957a7 983 SMART SM00086 383 425 77.0 T 01-11-2018 IPR001610 PAC motif CDA09_18565 a668c6ea7f72cd3afaabbd55bda57bbc 336 SMART SM00861 5 189 1.6E-64 T 01-11-2018 IPR005475 Transketolase-like, pyrimidine-binding domain CDA09_18565 a668c6ea7f72cd3afaabbd55bda57bbc 336 Gene3D G3DSA:3.40.50.920 202 335 1.5E-46 T 01-11-2018 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II GO:0003824 CDA09_18565 a668c6ea7f72cd3afaabbd55bda57bbc 336 SUPERFAMILY SSF52518 4 213 4.56E-68 T 01-11-2018 IPR029061 Thiamin diphosphate-binding fold CDA09_18565 a668c6ea7f72cd3afaabbd55bda57bbc 336 SUPERFAMILY SSF52922 198 332 6.15E-40 T 01-11-2018 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II GO:0003824 CDA09_18565 a668c6ea7f72cd3afaabbd55bda57bbc 336 Gene3D G3DSA:3.40.50.970 3 201 2.6E-86 T 01-11-2018 CDA09_18565 a668c6ea7f72cd3afaabbd55bda57bbc 336 Pfam PF02780 Transketolase, C-terminal domain 203 325 2.1E-42 T 01-11-2018 IPR033248 Transketolase, C-terminal domain CDA09_18565 a668c6ea7f72cd3afaabbd55bda57bbc 336 Pfam PF02779 Transketolase, pyrimidine binding domain 6 189 1.0E-56 T 01-11-2018 IPR005475 Transketolase-like, pyrimidine-binding domain CDA09_01720 119da90273c91e3c53bc9dcc9bd2a098 208 SUPERFAMILY SSF48498 86 194 3.26E-9 T 01-11-2018 IPR036271 Tetracyclin repressor-like, C-terminal domain superfamily CDA09_01720 119da90273c91e3c53bc9dcc9bd2a098 208 SUPERFAMILY SSF46689 5 76 8.21E-19 T 01-11-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 CDA09_01720 119da90273c91e3c53bc9dcc9bd2a098 208 Gene3D G3DSA:1.10.357.10 59 198 7.9E-30 T 01-11-2018 CDA09_01720 119da90273c91e3c53bc9dcc9bd2a098 208 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 16 29 2.9E-10 T 01-11-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 CDA09_01720 119da90273c91e3c53bc9dcc9bd2a098 208 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 37 60 2.9E-10 T 01-11-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 CDA09_01720 119da90273c91e3c53bc9dcc9bd2a098 208 Pfam PF00440 Bacterial regulatory proteins, tetR family 17 60 3.8E-17 T 01-11-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 CDA09_01720 119da90273c91e3c53bc9dcc9bd2a098 208 Gene3D G3DSA:1.10.10.60 12 58 1.2E-18 T 01-11-2018 CDA09_09665 95c0e076615abc0eac1d90bf38af609c 294 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 143 151 1.3E-7 T 01-11-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CDA09_09665 95c0e076615abc0eac1d90bf38af609c 294 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 84 95 1.3E-7 T 01-11-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CDA09_09665 95c0e076615abc0eac1d90bf38af609c 294 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 163 182 1.3E-7 T 01-11-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CDA09_09665 95c0e076615abc0eac1d90bf38af609c 294 Gene3D G3DSA:3.40.50.720 6 294 1.7E-76 T 01-11-2018 CDA09_09665 95c0e076615abc0eac1d90bf38af609c 294 Pfam PF00106 short chain dehydrogenase 10 201 2.0E-43 T 01-11-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CDA09_09665 95c0e076615abc0eac1d90bf38af609c 294 SMART SM00822 This enzymatic domain is part of bacterial polyketide synthases and catalyses the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain. It uses NADPH to reduce the keto group to a hydroxy group. 9 194 4.3E-6 T 01-11-2018 CDA09_09665 95c0e076615abc0eac1d90bf38af609c 294 SUPERFAMILY SSF51735 7 252 3.3E-62 T 01-11-2018 IPR036291 NAD(P)-binding domain superfamily CDA09_09665 95c0e076615abc0eac1d90bf38af609c 294 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 184 201 3.9E-20 T 01-11-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CDA09_09665 95c0e076615abc0eac1d90bf38af609c 294 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 137 153 3.9E-20 T 01-11-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CDA09_09665 95c0e076615abc0eac1d90bf38af609c 294 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 163 182 3.9E-20 T 01-11-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CDA09_09665 95c0e076615abc0eac1d90bf38af609c 294 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 10 27 3.9E-20 T 01-11-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CDA09_09665 95c0e076615abc0eac1d90bf38af609c 294 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 84 95 3.9E-20 T 01-11-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CDA09_09665 95c0e076615abc0eac1d90bf38af609c 294 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 150 178 - T 01-11-2018 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 CDA09_03780 aebec0c32cb59fdf2551ae30fd06e8b2 1164 Pfam PF02811 PHP domain 11 177 5.3E-40 T 01-11-2018 IPR004013 PHP domain GO:0003824 CDA09_03780 aebec0c32cb59fdf2551ae30fd06e8b2 1164 TIGRFAM TIGR00594 polc: DNA polymerase III, alpha subunit 9 1030 0.0 T 01-11-2018 IPR004805 DNA polymerase III, alpha subunit GO:0006260|GO:0008408 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 CDA09_03780 aebec0c32cb59fdf2551ae30fd06e8b2 1164 Gene3D G3DSA:3.20.20.140 1 274 4.3E-85 T 01-11-2018 CDA09_03780 aebec0c32cb59fdf2551ae30fd06e8b2 1164 Pfam PF01336 OB-fold nucleic acid binding domain 996 1068 1.8E-7 T 01-11-2018 IPR004365 OB-fold nucleic acid binding domain, AA-tRNA synthetase-type GO:0003676 CDA09_03780 aebec0c32cb59fdf2551ae30fd06e8b2 1164 Gene3D G3DSA:1.10.150.870 744 888 5.8E-6 T 01-11-2018 CDA09_03780 aebec0c32cb59fdf2551ae30fd06e8b2 1164 SUPERFAMILY SSF89550 9 267 6.67E-12 T 01-11-2018 IPR016195 Polymerase/histidinol phosphatase-like GO:0003824 Reactome: R-HSA-6784531|Reactome: R-HSA-6791226 CDA09_03780 aebec0c32cb59fdf2551ae30fd06e8b2 1164 Pfam PF07733 Bacterial DNA polymerase III alpha subunit 296 737 2.3E-169 T 01-11-2018 IPR011708 Bacterial DNA polymerase III, alpha subunit GO:0006260|GO:0008408 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 CDA09_03780 aebec0c32cb59fdf2551ae30fd06e8b2 1164 Gene3D G3DSA:1.10.10.1600 438 520 1.6E-22 T 01-11-2018 CDA09_03780 aebec0c32cb59fdf2551ae30fd06e8b2 1164 Pfam PF14579 Helix-hairpin-helix motif 810 894 5.9E-28 T 01-11-2018 IPR029460 DNA polymerase, helix-hairpin-helix motif KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 CDA09_03780 aebec0c32cb59fdf2551ae30fd06e8b2 1164 SMART SM00481 10 77 1.2E-19 T 01-11-2018 IPR003141 Polymerase/histidinol phosphatase, N-terminal CDA09_06155 f2a634a9dd82b5e55eb290929e265c48 189 Gene3D G3DSA:1.10.1740.10 2 78 1.9E-5 T 01-11-2018 CDA09_06155 f2a634a9dd82b5e55eb290929e265c48 189 SUPERFAMILY SSF88659 119 182 1.03E-16 T 01-11-2018 IPR013324 RNA polymerase sigma factor, region 3/4-like CDA09_06155 f2a634a9dd82b5e55eb290929e265c48 189 SUPERFAMILY SSF88946 7 84 5.89E-8 T 01-11-2018 IPR013325 RNA polymerase sigma factor, region 2 GO:0003700|GO:0006352|GO:0006355 CDA09_06155 f2a634a9dd82b5e55eb290929e265c48 189 Pfam PF08281 Sigma-70, region 4 126 176 3.0E-18 T 01-11-2018 IPR013249 RNA polymerase sigma factor 70, region 4 type 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 CDA09_06155 f2a634a9dd82b5e55eb290929e265c48 189 Gene3D G3DSA:1.10.10.10 105 186 1.7E-20 T 01-11-2018 IPR036388 Winged helix-like DNA-binding domain superfamily CDA09_06155 f2a634a9dd82b5e55eb290929e265c48 189 TIGRFAM TIGR02937 sigma70-ECF: RNA polymerase sigma factor, sigma-70 family 7 181 1.5E-21 T 01-11-2018 IPR014284 RNA polymerase sigma-70 like domain GO:0003700|GO:0006352|GO:0006355 CDA09_04685 ee1303dc829aafa7dc0d8d490c088697 577 Pfam PF00563 EAL domain 327 560 2.0E-63 T 01-11-2018 IPR001633 EAL domain CDA09_04685 ee1303dc829aafa7dc0d8d490c088697 577 SMART SM00052 321 566 4.7E-91 T 01-11-2018 IPR001633 EAL domain CDA09_04685 ee1303dc829aafa7dc0d8d490c088697 577 SUPERFAMILY SSF141868 326 573 3.01E-77 T 01-11-2018 IPR035919 EAL domain superfamily CDA09_04685 ee1303dc829aafa7dc0d8d490c088697 577 SMART SM00267 143 311 7.0E-6 T 01-11-2018 IPR000160 GGDEF domain CDA09_04685 ee1303dc829aafa7dc0d8d490c088697 577 Pfam PF00990 Diguanylate cyclase, GGDEF domain 156 301 2.0E-9 T 01-11-2018 IPR000160 GGDEF domain CDA09_04685 ee1303dc829aafa7dc0d8d490c088697 577 Gene3D G3DSA:3.20.20.450 325 577 1.2E-83 T 01-11-2018 IPR035919 EAL domain superfamily CDA09_04685 ee1303dc829aafa7dc0d8d490c088697 577 SUPERFAMILY SSF55073 160 311 6.12E-12 T 01-11-2018 IPR029787 Nucleotide cyclase CDA09_04685 ee1303dc829aafa7dc0d8d490c088697 577 Gene3D G3DSA:3.30.70.270 152 314 5.8E-14 T 01-11-2018 CDA09_08045 877380f667ec683efed0d6565207daf0 298 SUPERFAMILY SSF53850 90 295 5.61E-46 T 01-11-2018 CDA09_08045 877380f667ec683efed0d6565207daf0 298 SUPERFAMILY SSF46785 4 85 3.09E-21 T 01-11-2018 IPR036390 Winged helix DNA-binding domain superfamily CDA09_08045 877380f667ec683efed0d6565207daf0 298 Gene3D G3DSA:3.40.190.10 91 289 5.4E-63 T 01-11-2018 CDA09_08045 877380f667ec683efed0d6565207daf0 298 Pfam PF03466 LysR substrate binding domain 88 290 4.6E-43 T 01-11-2018 IPR005119 LysR, substrate-binding CDA09_08045 877380f667ec683efed0d6565207daf0 298 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 19 30 2.4E-5 T 01-11-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 CDA09_08045 877380f667ec683efed0d6565207daf0 298 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 40 51 2.4E-5 T 01-11-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 CDA09_08045 877380f667ec683efed0d6565207daf0 298 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 30 40 2.4E-5 T 01-11-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 CDA09_08045 877380f667ec683efed0d6565207daf0 298 Gene3D G3DSA:1.10.10.10 3 89 9.0E-27 T 01-11-2018 IPR036388 Winged helix-like DNA-binding domain superfamily CDA09_08045 877380f667ec683efed0d6565207daf0 298 Gene3D G3DSA:3.40.190.10 163 263 5.4E-63 T 01-11-2018 CDA09_08045 877380f667ec683efed0d6565207daf0 298 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 4 62 2.3E-18 T 01-11-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 CDA09_06570 023ce9c2ed975e6895cb45b084400ebf 598 Pfam PF00005 ABC transporter 377 525 2.2E-31 T 01-11-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 CDA09_06570 023ce9c2ed975e6895cb45b084400ebf 598 Gene3D G3DSA:1.20.1560.10 14 344 1.3E-77 T 01-11-2018 IPR036640 ABC transporter type 1, transmembrane domain superfamily GO:0005524|GO:0016021 CDA09_06570 023ce9c2ed975e6895cb45b084400ebf 598 SUPERFAMILY SSF52540 352 595 4.08E-88 T 01-11-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CDA09_06570 023ce9c2ed975e6895cb45b084400ebf 598 SUPERFAMILY SSF90123 19 336 2.09E-71 T 01-11-2018 IPR036640 ABC transporter type 1, transmembrane domain superfamily GO:0005524|GO:0016021 CDA09_06570 023ce9c2ed975e6895cb45b084400ebf 598 SMART SM00382 385 571 6.2E-20 T 01-11-2018 IPR003593 AAA+ ATPase domain CDA09_06570 023ce9c2ed975e6895cb45b084400ebf 598 Gene3D G3DSA:3.40.50.300 349 597 5.4E-92 T 01-11-2018 CDA09_06570 023ce9c2ed975e6895cb45b084400ebf 598 ProSitePatterns PS00211 ABC transporters family signature. 497 511 - T 01-11-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 CDA09_06570 023ce9c2ed975e6895cb45b084400ebf 598 Pfam PF00664 ABC transporter transmembrane region 33 308 1.9E-49 T 01-11-2018 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0016021|GO:0042626|GO:0055085 CDA09_20570 2d1b5fa10ce664046b9c90f0b5a67d85 541 Gene3D G3DSA:3.20.20.80 155 460 5.5E-105 T 01-11-2018 CDA09_20570 2d1b5fa10ce664046b9c90f0b5a67d85 541 SMART SM00642 1 399 1.2E-132 T 01-11-2018 IPR006047 Glycosyl hydrolase, family 13, catalytic domain GO:0003824|GO:0005975 CDA09_20570 2d1b5fa10ce664046b9c90f0b5a67d85 541 Gene3D G3DSA:3.20.20.80 2 90 1.5E-34 T 01-11-2018 CDA09_20570 2d1b5fa10ce664046b9c90f0b5a67d85 541 Gene3D G3DSA:3.90.400.10 91 154 6.9E-33 T 01-11-2018 CDA09_20570 2d1b5fa10ce664046b9c90f0b5a67d85 541 Pfam PF11941 Domain of unknown function (DUF3459) 444 535 4.8E-11 T 01-11-2018 IPR022567 Glycosyl hydrolase, C-terminal (DUF3459) CDA09_20570 2d1b5fa10ce664046b9c90f0b5a67d85 541 SUPERFAMILY SSF51445 1 457 1.72E-135 T 01-11-2018 IPR017853 Glycoside hydrolase superfamily CDA09_20570 2d1b5fa10ce664046b9c90f0b5a67d85 541 Pfam PF00128 Alpha amylase, catalytic domain 9 357 4.9E-104 T 01-11-2018 IPR006047 Glycosyl hydrolase, family 13, catalytic domain GO:0003824|GO:0005975 CDA09_20570 2d1b5fa10ce664046b9c90f0b5a67d85 541 SUPERFAMILY SSF51011 460 536 3.27E-11 T 01-11-2018 CDA09_20570 2d1b5fa10ce664046b9c90f0b5a67d85 541 Gene3D G3DSA:2.60.40.1180 461 538 1.6E-15 T 01-11-2018 IPR013780 Glycosyl hydrolase, all-beta CDA09_05575 28987048b0e977ffd743c37d29e6694a 399 Gene3D G3DSA:3.10.290.10 327 398 8.8E-18 T 01-11-2018 IPR036986 RNA-binding S4 domain superfamily GO:0003723 CDA09_05575 28987048b0e977ffd743c37d29e6694a 399 PRINTS PR01040 Tyrosyl-tRNA synthetase signature 211 223 7.2E-25 T 01-11-2018 IPR002307 Tyrosine-tRNA ligase GO:0000166|GO:0004831|GO:0005524|GO:0005737|GO:0006437 KEGG: 00970+6.1.1.1 CDA09_05575 28987048b0e977ffd743c37d29e6694a 399 PRINTS PR01040 Tyrosyl-tRNA synthetase signature 161 176 7.2E-25 T 01-11-2018 IPR002307 Tyrosine-tRNA ligase GO:0000166|GO:0004831|GO:0005524|GO:0005737|GO:0006437 KEGG: 00970+6.1.1.1 CDA09_05575 28987048b0e977ffd743c37d29e6694a 399 PRINTS PR01040 Tyrosyl-tRNA synthetase signature 178 200 7.2E-25 T 01-11-2018 IPR002307 Tyrosine-tRNA ligase GO:0000166|GO:0004831|GO:0005524|GO:0005737|GO:0006437 KEGG: 00970+6.1.1.1 CDA09_05575 28987048b0e977ffd743c37d29e6694a 399 PRINTS PR01040 Tyrosyl-tRNA synthetase signature 46 68 7.2E-25 T 01-11-2018 IPR002307 Tyrosine-tRNA ligase GO:0000166|GO:0004831|GO:0005524|GO:0005737|GO:0006437 KEGG: 00970+6.1.1.1 CDA09_05575 28987048b0e977ffd743c37d29e6694a 399 ProSitePatterns PS00178 Aminoacyl-transfer RNA synthetases class-I signature. 42 52 - T 01-11-2018 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site GO:0000166|GO:0004812|GO:0005524|GO:0006418 CDA09_05575 28987048b0e977ffd743c37d29e6694a 399 Gene3D G3DSA:3.40.50.620 5 217 3.3E-74 T 01-11-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold CDA09_05575 28987048b0e977ffd743c37d29e6694a 399 SUPERFAMILY SSF52374 8 316 2.95E-98 T 01-11-2018 CDA09_05575 28987048b0e977ffd743c37d29e6694a 399 SUPERFAMILY SSF55174 322 397 4.06E-18 T 01-11-2018 CDA09_05575 28987048b0e977ffd743c37d29e6694a 399 SMART SM00363 337 399 7.1E-6 T 01-11-2018 IPR002942 RNA-binding S4 domain GO:0003723 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 CDA09_05575 28987048b0e977ffd743c37d29e6694a 399 TIGRFAM TIGR00234 tyrS: tyrosine--tRNA ligase 7 397 1.7E-121 T 01-11-2018 IPR002307 Tyrosine-tRNA ligase GO:0000166|GO:0004831|GO:0005524|GO:0005737|GO:0006437 KEGG: 00970+6.1.1.1 CDA09_05575 28987048b0e977ffd743c37d29e6694a 399 Hamap MF_02007 Tyrosine--tRNA ligase [tyrS]. 2 398 48.538 T 01-11-2018 IPR024108 Tyrosine-tRNA ligase, bacterial-type, type 2 GO:0004831 KEGG: 00970+6.1.1.1 CDA09_05575 28987048b0e977ffd743c37d29e6694a 399 Gene3D G3DSA:1.10.240.10 218 326 2.1E-31 T 01-11-2018 CDA09_05575 28987048b0e977ffd743c37d29e6694a 399 Pfam PF00579 tRNA synthetases class I (W and Y) 31 317 4.5E-78 T 01-11-2018 IPR002305 Aminoacyl-tRNA synthetase, class Ic GO:0000166|GO:0004812|GO:0005524|GO:0006418 CDA09_05575 28987048b0e977ffd743c37d29e6694a 399 Pfam PF01479 S4 domain 338 381 2.1E-6 T 01-11-2018 IPR002942 RNA-binding S4 domain GO:0003723 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 CDA09_15035 499a2aa1a071a0df897f0f666196cc95 100 SUPERFAMILY SSF47413 44 97 2.68E-10 T 01-11-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 CDA09_15035 499a2aa1a071a0df897f0f666196cc95 100 Gene3D G3DSA:1.10.260.40 11 97 1.4E-16 T 01-11-2018 CDA09_15035 499a2aa1a071a0df897f0f666196cc95 100 Pfam PF01381 Helix-turn-helix 45 88 3.1E-6 T 01-11-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 CDA09_12640 4cc923dc7e8b954c50bc4b599da21163 357 Gene3D G3DSA:3.30.160.70 181 273 2.2E-30 T 01-11-2018 CDA09_12640 4cc923dc7e8b954c50bc4b599da21163 357 SUPERFAMILY SSF57884 10 96 2.48E-32 T 01-11-2018 IPR035451 Ada-like domain superfamily CDA09_12640 4cc923dc7e8b954c50bc4b599da21163 357 Pfam PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain 276 355 3.4E-31 T 01-11-2018 IPR014048 Methylated-DNA-[protein]-cysteine S-methyltransferase, DNA binding GO:0003824|GO:0006281 Reactome: R-HSA-5657655 CDA09_12640 4cc923dc7e8b954c50bc4b599da21163 357 SUPERFAMILY SSF53155 194 273 3.14E-21 T 01-11-2018 IPR036631 Methylated DNA-protein cysteine methyltransferase domain superfamily GO:0003908|GO:0006281 Reactome: R-HSA-5657655 CDA09_12640 4cc923dc7e8b954c50bc4b599da21163 357 ProSitePatterns PS00374 Methylated-DNA--protein-cysteine methyltransferase active site. 325 331 - T 01-11-2018 IPR001497 Methylated-DNA-[protein]-cysteine S-methyltransferase, active site GO:0003908|GO:0006281 Reactome: R-HSA-5657655 CDA09_12640 4cc923dc7e8b954c50bc4b599da21163 357 Pfam PF12833 Helix-turn-helix domain 111 188 5.0E-16 T 01-11-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 CDA09_12640 4cc923dc7e8b954c50bc4b599da21163 357 Gene3D G3DSA:1.10.10.60 83 145 8.0E-20 T 01-11-2018 CDA09_12640 4cc923dc7e8b954c50bc4b599da21163 357 SUPERFAMILY SSF46767 274 354 5.36E-30 T 01-11-2018 IPR036217 Methylated DNA-protein cysteine methyltransferase, DNA binding domain Reactome: R-HSA-5657655 CDA09_12640 4cc923dc7e8b954c50bc4b599da21163 357 SUPERFAMILY SSF46689 103 138 6.0E-7 T 01-11-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 CDA09_12640 4cc923dc7e8b954c50bc4b599da21163 357 PIRSF PIRSF000409 1 357 2.2E-139 T 01-11-2018 IPR016221 Bifunctional regulatory protein Ada CDA09_12640 4cc923dc7e8b954c50bc4b599da21163 357 TIGRFAM TIGR00589 ogt: methylated-DNA--[protein]-cysteine S-methyltransferase 275 354 2.2E-33 T 01-11-2018 IPR014048 Methylated-DNA-[protein]-cysteine S-methyltransferase, DNA binding GO:0003824|GO:0006281 Reactome: R-HSA-5657655 CDA09_12640 4cc923dc7e8b954c50bc4b599da21163 357 SMART SM00342 105 187 3.2E-16 T 01-11-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 CDA09_12640 4cc923dc7e8b954c50bc4b599da21163 357 Pfam PF02805 Metal binding domain of Ada 17 79 1.0E-31 T 01-11-2018 IPR004026 Ada DNA repair, metal-binding GO:0003677|GO:0006281|GO:0006355|GO:0008168|GO:0008270 CDA09_12640 4cc923dc7e8b954c50bc4b599da21163 357 Gene3D G3DSA:3.40.10.10 7 81 1.7E-31 T 01-11-2018 IPR035451 Ada-like domain superfamily CDA09_12640 4cc923dc7e8b954c50bc4b599da21163 357 Gene3D G3DSA:1.10.10.10 274 357 3.7E-34 T 01-11-2018 IPR036388 Winged helix-like DNA-binding domain superfamily CDA09_10910 f7cc0b6dc4e2bc11b5108097593ab846 416 SUPERFAMILY SSF52467 288 404 1.22E-34 T 01-11-2018 IPR029035 DHS-like NAD/FAD-binding domain superfamily CDA09_10910 f7cc0b6dc4e2bc11b5108097593ab846 416 SMART SM00893 100 277 0.0015 T 01-11-2018 IPR014730 Electron transfer flavoprotein, alpha/beta-subunit, N-terminal Reactome: R-HSA-611105 CDA09_10910 f7cc0b6dc4e2bc11b5108097593ab846 416 Gene3D G3DSA:3.40.50.1220 283 416 6.0E-39 T 01-11-2018 CDA09_10910 f7cc0b6dc4e2bc11b5108097593ab846 416 PIRSF PIRSF000089 97 410 1.0E-70 T 01-11-2018 IPR001308 Electron transfer flavoprotein alpha subunit/FixB GO:0009055|GO:0050660 Reactome: R-HSA-611105 CDA09_10910 f7cc0b6dc4e2bc11b5108097593ab846 416 Pfam PF01012 Electron transfer flavoprotein domain 102 254 6.1E-15 T 01-11-2018 IPR014730 Electron transfer flavoprotein, alpha/beta-subunit, N-terminal Reactome: R-HSA-611105 CDA09_10910 f7cc0b6dc4e2bc11b5108097593ab846 416 Gene3D G3DSA:3.40.50.620 99 267 1.0E-15 T 01-11-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold CDA09_10910 f7cc0b6dc4e2bc11b5108097593ab846 416 SUPERFAMILY SSF52402 100 228 1.6E-16 T 01-11-2018 CDA09_10910 f7cc0b6dc4e2bc11b5108097593ab846 416 Pfam PF00766 Electron transfer flavoprotein FAD-binding domain 289 367 4.1E-24 T 01-11-2018 IPR014731 Electron transfer flavoprotein, alpha subunit, C-terminal Reactome: R-HSA-611105 CDA09_10555 fad373e3821f3c9fc989e1ebc62081e1 714 SUPERFAMILY SSF52518 19 201 1.08E-28 T 01-11-2018 IPR029061 Thiamin diphosphate-binding fold CDA09_10555 fad373e3821f3c9fc989e1ebc62081e1 714 SUPERFAMILY SSF52518 406 628 2.54E-22 T 01-11-2018 IPR029061 Thiamin diphosphate-binding fold CDA09_10555 fad373e3821f3c9fc989e1ebc62081e1 714 Gene3D G3DSA:3.40.50.970 426 604 2.5E-11 T 01-11-2018 CDA09_10555 fad373e3821f3c9fc989e1ebc62081e1 714 Gene3D G3DSA:3.40.50.970 7 202 1.1E-25 T 01-11-2018 CDA09_10555 fad373e3821f3c9fc989e1ebc62081e1 714 Pfam PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain 440 576 2.1E-16 T 01-11-2018 IPR011766 Thiamine pyrophosphate enzyme, C-terminal TPP-binding GO:0003824|GO:0030976 CDA09_10555 fad373e3821f3c9fc989e1ebc62081e1 714 PIRSF PIRSF006439 14 674 3.6E-87 T 01-11-2018 IPR017721 Indolepyruvate ferredoxin oxidoreductase, alpha subunit GO:0043805|GO:0055114 CDA09_15465 7536532e6f8a3b322f76ebd617f78e78 694 SUPERFAMILY SSF51735 194 339 6.12E-24 T 01-11-2018 IPR036291 NAD(P)-binding domain superfamily CDA09_15465 7536532e6f8a3b322f76ebd617f78e78 694 SUPERFAMILY SSF52210 509 682 1.31E-17 T 01-11-2018 IPR016102 Succinyl-CoA synthetase-like KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384 CDA09_15465 7536532e6f8a3b322f76ebd617f78e78 694 Gene3D G3DSA:3.40.50.261 334 499 5.3E-34 T 01-11-2018 IPR016102 Succinyl-CoA synthetase-like KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384 CDA09_15465 7536532e6f8a3b322f76ebd617f78e78 694 SUPERFAMILY SSF52210 336 498 7.33E-26 T 01-11-2018 IPR016102 Succinyl-CoA synthetase-like KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384 CDA09_15465 7536532e6f8a3b322f76ebd617f78e78 694 SMART SM00881 202 299 1.4E-10 T 01-11-2018 IPR003781 CoA-binding GO:0048037 CDA09_15465 7536532e6f8a3b322f76ebd617f78e78 694 Pfam PF13607 Succinyl-CoA ligase like flavodoxin domain 367 496 1.1E-31 T 01-11-2018 IPR032875 Succinyl-CoA synthetase-like, flavodoxin domain CDA09_15465 7536532e6f8a3b322f76ebd617f78e78 694 Gene3D G3DSA:3.40.50.720 196 329 3.0E-24 T 01-11-2018 CDA09_15465 7536532e6f8a3b322f76ebd617f78e78 694 Pfam PF13380 CoA binding domain 207 338 1.5E-13 T 01-11-2018 IPR003781 CoA-binding GO:0048037 CDA09_15465 7536532e6f8a3b322f76ebd617f78e78 694 Gene3D G3DSA:3.40.50.261 507 688 2.7E-17 T 01-11-2018 IPR016102 Succinyl-CoA synthetase-like KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384 CDA09_19780 9996c3ffb47bfc2a98dbb161c5d2a416 629 Gene3D G3DSA:3.30.70.270 186 351 4.0E-40 T 01-11-2018 CDA09_19780 9996c3ffb47bfc2a98dbb161c5d2a416 629 Pfam PF00990 Diguanylate cyclase, GGDEF domain 191 343 7.1E-34 T 01-11-2018 IPR000160 GGDEF domain CDA09_19780 9996c3ffb47bfc2a98dbb161c5d2a416 629 SMART SM00052 360 605 4.0E-106 T 01-11-2018 IPR001633 EAL domain CDA09_19780 9996c3ffb47bfc2a98dbb161c5d2a416 629 SUPERFAMILY SSF141868 366 613 3.27E-85 T 01-11-2018 IPR035919 EAL domain superfamily CDA09_19780 9996c3ffb47bfc2a98dbb161c5d2a416 629 Pfam PF13185 GAF domain 21 171 1.0E-15 T 01-11-2018 IPR003018 GAF domain GO:0005515 CDA09_19780 9996c3ffb47bfc2a98dbb161c5d2a416 629 SMART SM00267 180 350 3.8E-39 T 01-11-2018 IPR000160 GGDEF domain CDA09_19780 9996c3ffb47bfc2a98dbb161c5d2a416 629 Gene3D G3DSA:3.30.450.40 2 185 2.1E-25 T 01-11-2018 IPR029016 GAF-like domain superfamily CDA09_19780 9996c3ffb47bfc2a98dbb161c5d2a416 629 SUPERFAMILY SSF55781 5 179 7.41E-18 T 01-11-2018 CDA09_19780 9996c3ffb47bfc2a98dbb161c5d2a416 629 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 188 343 8.5E-26 T 01-11-2018 IPR000160 GGDEF domain CDA09_19780 9996c3ffb47bfc2a98dbb161c5d2a416 629 SUPERFAMILY SSF55073 196 343 7.06E-33 T 01-11-2018 IPR029787 Nucleotide cyclase CDA09_19780 9996c3ffb47bfc2a98dbb161c5d2a416 629 Gene3D G3DSA:3.20.20.450 361 613 3.1E-94 T 01-11-2018 IPR035919 EAL domain superfamily CDA09_19780 9996c3ffb47bfc2a98dbb161c5d2a416 629 Pfam PF00563 EAL domain 366 600 6.0E-66 T 01-11-2018 IPR001633 EAL domain CDA09_01765 ff0ddb0a832942f2705140b014768ea1 172 SUPERFAMILY SSF52949 5 167 1.6E-63 T 01-11-2018 CDA09_01765 ff0ddb0a832942f2705140b014768ea1 172 Pfam PF01661 Macro domain 21 133 6.5E-44 T 01-11-2018 IPR002589 Macro domain CDA09_01765 ff0ddb0a832942f2705140b014768ea1 172 SMART SM00506 4 133 3.9E-48 T 01-11-2018 IPR002589 Macro domain CDA09_01765 ff0ddb0a832942f2705140b014768ea1 172 Gene3D G3DSA:3.40.220.10 1 171 1.5E-73 T 01-11-2018 CDA09_04695 f00624ff824f021728e8ef7344be93d5 957 SUPERFAMILY SSF55785 407 514 9.6E-20 T 01-11-2018 IPR035965 PAS domain superfamily CDA09_04695 f00624ff824f021728e8ef7344be93d5 957 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 523 683 2.6E-42 T 01-11-2018 IPR000160 GGDEF domain CDA09_04695 f00624ff824f021728e8ef7344be93d5 957 Pfam PF08448 PAS fold 407 515 1.2E-12 T 01-11-2018 IPR013656 PAS fold-4 CDA09_04695 f00624ff824f021728e8ef7344be93d5 957 Pfam PF00563 EAL domain 701 936 9.0E-70 T 01-11-2018 IPR001633 EAL domain CDA09_04695 f00624ff824f021728e8ef7344be93d5 957 SMART SM00304 320 372 9.7E-12 T 01-11-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 CDA09_04695 f00624ff824f021728e8ef7344be93d5 957 SMART SM00086 472 514 5.9E-6 T 01-11-2018 IPR001610 PAC motif CDA09_04695 f00624ff824f021728e8ef7344be93d5 957 Gene3D G3DSA:1.20.1480.50 279 384 5.7E-9 T 01-11-2018 CDA09_04695 f00624ff824f021728e8ef7344be93d5 957 Gene3D G3DSA:3.30.70.270 523 698 1.7E-62 T 01-11-2018 CDA09_04695 f00624ff824f021728e8ef7344be93d5 957 Gene3D G3DSA:3.30.450.20 399 522 7.9E-22 T 01-11-2018 CDA09_04695 f00624ff824f021728e8ef7344be93d5 957 SMART SM00267 514 685 4.9E-62 T 01-11-2018 IPR000160 GGDEF domain CDA09_04695 f00624ff824f021728e8ef7344be93d5 957 Pfam PF12729 Four helix bundle sensory module for signal transduction 118 290 7.9E-7 T 01-11-2018 IPR024478 Chemotaxis methyl-accepting receptor HlyB-like, 4HB MCP domain CDA09_04695 f00624ff824f021728e8ef7344be93d5 957 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 401 520 3.4E-11 T 01-11-2018 IPR000014 PAS domain CDA09_04695 f00624ff824f021728e8ef7344be93d5 957 SUPERFAMILY SSF55073 530 687 9.73E-51 T 01-11-2018 IPR029787 Nucleotide cyclase CDA09_04695 f00624ff824f021728e8ef7344be93d5 957 SUPERFAMILY SSF158472 320 365 1.31E-6 T 01-11-2018 CDA09_04695 f00624ff824f021728e8ef7344be93d5 957 Pfam PF00990 Diguanylate cyclase, GGDEF domain 525 681 2.2E-48 T 01-11-2018 IPR000160 GGDEF domain CDA09_04695 f00624ff824f021728e8ef7344be93d5 957 Gene3D G3DSA:3.20.20.450 699 947 1.9E-98 T 01-11-2018 IPR035919 EAL domain superfamily CDA09_04695 f00624ff824f021728e8ef7344be93d5 957 Pfam PF00672 HAMP domain 320 366 1.5E-12 T 01-11-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 CDA09_04695 f00624ff824f021728e8ef7344be93d5 957 SUPERFAMILY SSF141868 700 948 7.19E-87 T 01-11-2018 IPR035919 EAL domain superfamily CDA09_04695 f00624ff824f021728e8ef7344be93d5 957 SMART SM00052 695 941 3.0E-114 T 01-11-2018 IPR001633 EAL domain CDA09_08930 a28178d1fdf52bade3af7587095fb670 657 SUPERFAMILY SSF56801 11 653 1.2E-175 T 01-11-2018 CDA09_08930 a28178d1fdf52bade3af7587095fb670 657 Pfam PF00501 AMP-binding enzyme 91 531 3.0E-94 T 01-11-2018 IPR000873 AMP-dependent synthetase/ligase GO:0003824 CDA09_08930 a28178d1fdf52bade3af7587095fb670 657 ProSitePatterns PS00455 Putative AMP-binding domain signature. 263 274 - T 01-11-2018 IPR020845 AMP-binding, conserved site CDA09_08930 a28178d1fdf52bade3af7587095fb670 657 Pfam PF16177 Acetyl-coenzyme A synthetase N-terminus 28 83 8.3E-22 T 01-11-2018 IPR032387 Acetyl-coenzyme A synthetase, N-terminal domain KEGG: 00010+6.2.1.1|KEGG: 00620+6.2.1.1|KEGG: 00630+6.2.1.1|KEGG: 00640+6.2.1.1|KEGG: 00680+6.2.1.1|KEGG: 00720+6.2.1.1|MetaCyc: PWY-5108|MetaCyc: PWY-5132|MetaCyc: PWY-5133|MetaCyc: PWY-6672|MetaCyc: PWY-7118|MetaCyc: PWY-7857 CDA09_08930 a28178d1fdf52bade3af7587095fb670 657 Hamap MF_01123 Acetyl-coenzyme A synthetase [acs]. 5 656 51.609 T 01-11-2018 IPR011904 Acetate-CoA ligase GO:0003987|GO:0016208|GO:0019427 KEGG: 00010+6.2.1.1|KEGG: 00620+6.2.1.1|KEGG: 00630+6.2.1.1|KEGG: 00640+6.2.1.1|KEGG: 00680+6.2.1.1|KEGG: 00720+6.2.1.1|MetaCyc: PWY-5108|MetaCyc: PWY-5132|MetaCyc: PWY-5133|MetaCyc: PWY-6672|MetaCyc: PWY-7118|MetaCyc: PWY-7857|Reactome: R-HSA-71384 CDA09_08930 a28178d1fdf52bade3af7587095fb670 657 TIGRFAM TIGR02188 Ac_CoA_lig_AcsA: acetate--CoA ligase 23 654 9.4E-296 T 01-11-2018 IPR011904 Acetate-CoA ligase GO:0003987|GO:0016208|GO:0019427 KEGG: 00010+6.2.1.1|KEGG: 00620+6.2.1.1|KEGG: 00630+6.2.1.1|KEGG: 00640+6.2.1.1|KEGG: 00680+6.2.1.1|KEGG: 00720+6.2.1.1|MetaCyc: PWY-5108|MetaCyc: PWY-5132|MetaCyc: PWY-5133|MetaCyc: PWY-6672|MetaCyc: PWY-7118|MetaCyc: PWY-7857|Reactome: R-HSA-71384 CDA09_08930 a28178d1fdf52bade3af7587095fb670 657 Pfam PF13193 AMP-binding enzyme C-terminal domain 540 621 4.9E-27 T 01-11-2018 IPR025110 AMP-binding enzyme, C-terminal domain CDA09_08930 a28178d1fdf52bade3af7587095fb670 657 Gene3D G3DSA:3.30.300.30 527 657 4.3E-29 T 01-11-2018 CDA09_08930 a28178d1fdf52bade3af7587095fb670 657 Gene3D G3DSA:3.40.50.12780 53 524 9.2E-104 T 01-11-2018 CDA09_15955 80029def9e78c687817a0572f632192e 393 PIRSF PIRSF000429 1 393 3.3E-115 T 01-11-2018 IPR002155 Thiolase GO:0016747 CDA09_15955 80029def9e78c687817a0572f632192e 393 TIGRFAM TIGR01930 AcCoA-C-Actrans: acetyl-CoA C-acyltransferase 8 391 1.9E-125 T 01-11-2018 IPR002155 Thiolase GO:0016747 CDA09_15955 80029def9e78c687817a0572f632192e 393 ProSitePatterns PS00737 Thiolases signature 2. 339 355 - T 01-11-2018 IPR020613 Thiolase, conserved site GO:0016747 CDA09_15955 80029def9e78c687817a0572f632192e 393 Gene3D G3DSA:3.40.47.10 129 389 6.6E-136 T 01-11-2018 IPR016039 Thiolase-like GO:0003824 CDA09_15955 80029def9e78c687817a0572f632192e 393 Pfam PF02803 Thiolase, C-terminal domain 271 391 1.7E-42 T 01-11-2018 IPR020617 Thiolase, C-terminal GO:0016747 CDA09_15955 80029def9e78c687817a0572f632192e 393 Pfam PF00108 Thiolase, N-terminal domain 6 261 7.3E-77 T 01-11-2018 IPR020616 Thiolase, N-terminal GO:0016747 CDA09_15955 80029def9e78c687817a0572f632192e 393 SUPERFAMILY SSF53901 271 392 1.98E-41 T 01-11-2018 IPR016039 Thiolase-like GO:0003824 CDA09_15955 80029def9e78c687817a0572f632192e 393 Gene3D G3DSA:3.40.47.10 8 276 6.6E-136 T 01-11-2018 IPR016039 Thiolase-like GO:0003824 CDA09_15955 80029def9e78c687817a0572f632192e 393 SUPERFAMILY SSF53901 5 269 2.51E-72 T 01-11-2018 IPR016039 Thiolase-like GO:0003824 CDA09_04510 9c6a8b75769167b70ad2d577e6c0ff58 96 Pfam PF05402 Coenzyme PQQ synthesis protein D (PqqD) 30 92 4.9E-14 T 01-11-2018 IPR008792 Coenzyme PQQ synthesis D CDA09_04510 9c6a8b75769167b70ad2d577e6c0ff58 96 TIGRFAM TIGR03859 PQQ_PqqD: coenzyme PQQ biosynthesis protein PqqD 14 93 1.3E-24 T 01-11-2018 IPR022479 Coenzyme PQQ synthesis D, bacteria GO:0018189|GO:0048038 CDA09_04510 9c6a8b75769167b70ad2d577e6c0ff58 96 Gene3D G3DSA:1.10.10.1150 2 94 1.3E-20 T 01-11-2018 CDA09_15830 74ce403dc59a8fd29d2ee946dd81a9a6 632 SUPERFAMILY SSF54631 171 287 4.13E-29 T 01-11-2018 CDA09_15830 74ce403dc59a8fd29d2ee946dd81a9a6 632 SUPERFAMILY SSF51206 15 153 1.44E-15 T 01-11-2018 IPR018490 Cyclic nucleotide-binding-like CDA09_15830 74ce403dc59a8fd29d2ee946dd81a9a6 632 Gene3D G3DSA:2.60.120.10 12 160 4.0E-13 T 01-11-2018 IPR014710 RmlC-like jelly roll fold CDA09_15830 74ce403dc59a8fd29d2ee946dd81a9a6 632 Pfam PF03445 Putative nucleotidyltransferase DUF294 315 454 9.5E-46 T 01-11-2018 IPR005105 Protein-PII uridylyltransferase, N-terminal GO:0008773 CDA09_15830 74ce403dc59a8fd29d2ee946dd81a9a6 632 Pfam PF00027 Cyclic nucleotide-binding domain 55 128 3.3E-7 T 01-11-2018 IPR000595 Cyclic nucleotide-binding domain CDA09_15830 74ce403dc59a8fd29d2ee946dd81a9a6 632 Pfam PF00571 CBS domain 171 221 1.9E-9 T 01-11-2018 IPR000644 CBS domain CDA09_15830 74ce403dc59a8fd29d2ee946dd81a9a6 632 Pfam PF00571 CBS domain 235 287 1.2E-9 T 01-11-2018 IPR000644 CBS domain CDA09_15830 74ce403dc59a8fd29d2ee946dd81a9a6 632 Pfam PF10335 Putative nucleotidyltransferase substrate binding domain 491 630 7.7E-42 T 01-11-2018 IPR018821 Domain of unknown function DUF294, putative nucleotidyltransferase substrate-binding CDA09_15830 74ce403dc59a8fd29d2ee946dd81a9a6 632 SUPERFAMILY SSF81301 293 401 2.42E-6 T 01-11-2018 CDA09_15830 74ce403dc59a8fd29d2ee946dd81a9a6 632 Gene3D G3DSA:3.10.580.10 163 296 9.3E-33 T 01-11-2018 CDA09_15830 74ce403dc59a8fd29d2ee946dd81a9a6 632 SMART SM00116 242 290 0.0019 T 01-11-2018 IPR000644 CBS domain CDA09_15830 74ce403dc59a8fd29d2ee946dd81a9a6 632 SMART SM00116 177 225 1.4E-6 T 01-11-2018 IPR000644 CBS domain CDA09_04210 97d885eeda9e01b0c83526ebc42601ef 181 Gene3D G3DSA:2.60.450.10 24 176 1.3E-44 T 01-11-2018 CDA09_04210 97d885eeda9e01b0c83526ebc42601ef 181 TIGRFAM TIGR03002 outer_YhbN_LptA: lipopolysaccharide transport periplasmic protein LptA 22 173 4.2E-43 T 01-11-2018 IPR014340 Lipopolysaccharide export system protein LptA GO:0001530|GO:0015920|GO:0042597 CDA09_04210 97d885eeda9e01b0c83526ebc42601ef 181 Pfam PF03968 OstA-like protein 32 143 3.1E-26 T 01-11-2018 IPR005653 Organic solvent tolerance-like, N-terminal CDA09_04210 97d885eeda9e01b0c83526ebc42601ef 181 Hamap MF_01914 Lipopolysaccharide export system protein LptA [lptA]. 2 173 24.943 T 01-11-2018 IPR014340 Lipopolysaccharide export system protein LptA GO:0001530|GO:0015920|GO:0042597 CDA09_10745 00f7ea2458842ff7844fc8bfc404cf09 299 Pfam PF10778 Halocarboxylic acid dehydrogenase DehI 57 143 5.3E-9 T 01-11-2018 IPR019714 2-haloacid dehalogenase, DehI GO:0019120 CDA09_10745 00f7ea2458842ff7844fc8bfc404cf09 299 Gene3D G3DSA:1.20.1290.10 167 248 2.2E-6 T 01-11-2018 IPR029032 AhpD-like Reactome: R-HSA-5628897 CDA09_08170 11eaf5ad4c5830863dee87cac1a9a34b 258 Gene3D G3DSA:2.40.30.10 3 100 1.3E-28 T 01-11-2018 CDA09_08170 11eaf5ad4c5830863dee87cac1a9a34b 258 SUPERFAMILY SSF52343 110 248 2.23E-32 T 01-11-2018 IPR039261 Ferredoxin-NADP reductase (FNR), nucleotide-binding domain CDA09_08170 11eaf5ad4c5830863dee87cac1a9a34b 258 PRINTS PR00410 Phenol hydroxylase reductase family signature 116 135 4.6E-7 T 01-11-2018 IPR001221 Phenol hydroxylase reductase GO:0055114 CDA09_08170 11eaf5ad4c5830863dee87cac1a9a34b 258 PRINTS PR00410 Phenol hydroxylase reductase family signature 141 150 4.6E-7 T 01-11-2018 IPR001221 Phenol hydroxylase reductase GO:0055114 CDA09_08170 11eaf5ad4c5830863dee87cac1a9a34b 258 PRINTS PR00410 Phenol hydroxylase reductase family signature 219 227 4.6E-7 T 01-11-2018 IPR001221 Phenol hydroxylase reductase GO:0055114 CDA09_08170 11eaf5ad4c5830863dee87cac1a9a34b 258 PRINTS PR00410 Phenol hydroxylase reductase family signature 36 48 4.6E-7 T 01-11-2018 IPR001221 Phenol hydroxylase reductase GO:0055114 CDA09_08170 11eaf5ad4c5830863dee87cac1a9a34b 258 PRINTS PR00371 Flavoprotein pyridine nucleotide cytochrome reductase signature 56 63 3.5E-8 T 01-11-2018 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase GO:0016491|GO:0055114 CDA09_08170 11eaf5ad4c5830863dee87cac1a9a34b 258 PRINTS PR00371 Flavoprotein pyridine nucleotide cytochrome reductase signature 153 164 3.5E-8 T 01-11-2018 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase GO:0016491|GO:0055114 CDA09_08170 11eaf5ad4c5830863dee87cac1a9a34b 258 PRINTS PR00371 Flavoprotein pyridine nucleotide cytochrome reductase signature 116 135 3.5E-8 T 01-11-2018 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase GO:0016491|GO:0055114 CDA09_08170 11eaf5ad4c5830863dee87cac1a9a34b 258 PRINTS PR00371 Flavoprotein pyridine nucleotide cytochrome reductase signature 141 150 3.5E-8 T 01-11-2018 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase GO:0016491|GO:0055114 CDA09_08170 11eaf5ad4c5830863dee87cac1a9a34b 258 Pfam PF00970 Oxidoreductase FAD-binding domain 22 102 4.7E-9 T 01-11-2018 IPR008333 Flavoprotein pyridine nucleotide cytochrome reductase-like, FAD-binding domain Reactome: R-HSA-1237044 CDA09_08170 11eaf5ad4c5830863dee87cac1a9a34b 258 SUPERFAMILY SSF63380 8 104 2.51E-24 T 01-11-2018 IPR017938 Riboflavin synthase-like beta-barrel CDA09_08170 11eaf5ad4c5830863dee87cac1a9a34b 258 Pfam PF00175 Oxidoreductase NAD-binding domain 117 233 6.5E-14 T 01-11-2018 IPR001433 Oxidoreductase FAD/NAD(P)-binding GO:0016491|GO:0055114 CDA09_08170 11eaf5ad4c5830863dee87cac1a9a34b 258 Gene3D G3DSA:3.40.50.80 102 258 1.3E-39 T 01-11-2018 IPR039261 Ferredoxin-NADP reductase (FNR), nucleotide-binding domain CDA09_05540 94a2c4b56cabc7d9c0707dabc0297379 482 Gene3D G3DSA:3.40.640.10 67 318 6.5E-161 T 01-11-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 CDA09_05540 94a2c4b56cabc7d9c0707dabc0297379 482 PIRSF PIRSF001386 9 464 3.0E-186 T 01-11-2018 IPR011166 Beta-eliminating lyase family GO:0009072|GO:0016830 KEGG: 00380+4.1.99.1 CDA09_05540 94a2c4b56cabc7d9c0707dabc0297379 482 SUPERFAMILY SSF53383 13 463 1.34E-115 T 01-11-2018 IPR015424 Pyridoxal phosphate-dependent transferase CDA09_05540 94a2c4b56cabc7d9c0707dabc0297379 482 Pfam PF01212 Beta-eliminating lyase 55 426 1.0E-55 T 01-11-2018 IPR001597 Aromatic amino acid beta-eliminating lyase/threonine aldolase GO:0006520|GO:0016829 Reactome: R-HSA-6783984 CDA09_05540 94a2c4b56cabc7d9c0707dabc0297379 482 Gene3D G3DSA:3.90.1150.10 15 457 6.5E-161 T 01-11-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 CDA09_13795 8e262e83eaf4237a5ade46e4d3328ecd 273 Pfam PF01695 IstB-like ATP binding protein 52 228 1.5E-59 T 01-11-2018 IPR002611 IstB-like ATP-binding protein GO:0005524 CDA09_13795 8e262e83eaf4237a5ade46e4d3328ecd 273 Gene3D G3DSA:3.40.50.300 59 246 1.3E-41 T 01-11-2018 CDA09_13795 8e262e83eaf4237a5ade46e4d3328ecd 273 SUPERFAMILY SSF52540 91 230 5.7E-21 T 01-11-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CDA09_13795 8e262e83eaf4237a5ade46e4d3328ecd 273 SMART SM00382 95 232 2.3E-8 T 01-11-2018 IPR003593 AAA+ ATPase domain CDA09_13795 8e262e83eaf4237a5ade46e4d3328ecd 273 PIRSF PIRSF003073 1 250 2.0E-70 T 01-11-2018 IPR028350 DNA replication protein DnaC/insertion sequence putative ATP-binding protein CDA09_00040 8e262e83eaf4237a5ade46e4d3328ecd 273 Pfam PF01695 IstB-like ATP binding protein 52 228 1.5E-59 T 01-11-2018 IPR002611 IstB-like ATP-binding protein GO:0005524 CDA09_00040 8e262e83eaf4237a5ade46e4d3328ecd 273 Gene3D G3DSA:3.40.50.300 59 246 1.3E-41 T 01-11-2018 CDA09_00040 8e262e83eaf4237a5ade46e4d3328ecd 273 SUPERFAMILY SSF52540 91 230 5.7E-21 T 01-11-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CDA09_00040 8e262e83eaf4237a5ade46e4d3328ecd 273 SMART SM00382 95 232 2.3E-8 T 01-11-2018 IPR003593 AAA+ ATPase domain CDA09_00040 8e262e83eaf4237a5ade46e4d3328ecd 273 PIRSF PIRSF003073 1 250 2.0E-70 T 01-11-2018 IPR028350 DNA replication protein DnaC/insertion sequence putative ATP-binding protein CDA09_05690 0bc82e2908045148c588fbab434c472e 676 Gene3D G3DSA:3.30.70.270 498 666 1.1E-55 T 01-11-2018 CDA09_05690 0bc82e2908045148c588fbab434c472e 676 SUPERFAMILY SSF55073 506 661 6.54E-50 T 01-11-2018 IPR029787 Nucleotide cyclase CDA09_05690 0bc82e2908045148c588fbab434c472e 676 SUPERFAMILY SSF52172 349 496 5.98E-36 T 01-11-2018 IPR011006 CheY-like superfamily CDA09_05690 0bc82e2908045148c588fbab434c472e 676 Gene3D G3DSA:3.40.50.2300 348 497 4.8E-32 T 01-11-2018 CDA09_05690 0bc82e2908045148c588fbab434c472e 676 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 498 660 6.5E-50 T 01-11-2018 IPR000160 GGDEF domain CDA09_05690 0bc82e2908045148c588fbab434c472e 676 Pfam PF00072 Response regulator receiver domain 353 463 5.3E-24 T 01-11-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 CDA09_05690 0bc82e2908045148c588fbab434c472e 676 Pfam PF00990 Diguanylate cyclase, GGDEF domain 501 657 2.6E-44 T 01-11-2018 IPR000160 GGDEF domain CDA09_05690 0bc82e2908045148c588fbab434c472e 676 SMART SM00448 350 463 1.4E-33 T 01-11-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 CDA09_05690 0bc82e2908045148c588fbab434c472e 676 SMART SM00267 490 662 2.0E-58 T 01-11-2018 IPR000160 GGDEF domain CDA09_05690 0bc82e2908045148c588fbab434c472e 676 Gene3D G3DSA:1.10.3210.10 16 274 1.1E-62 T 01-11-2018 CDA09_05690 0bc82e2908045148c588fbab434c472e 676 Pfam PF08668 HDOD domain 19 214 4.7E-44 T 01-11-2018 IPR013976 Metal-dependent hydrolase HDOD CDA09_05690 0bc82e2908045148c588fbab434c472e 676 SUPERFAMILY SSF109604 13 273 5.96E-48 T 01-11-2018 CDA09_03870 9ac389ce80a6704df1362b8fe7268633 244 Pfam PF10411 Disulfide bond isomerase protein N-terminus 35 89 3.8E-15 T 01-11-2018 IPR018950 Disulphide bond isomerase, DsbC/G, N-terminal CDA09_03870 9ac389ce80a6704df1362b8fe7268633 244 Pfam PF13098 Thioredoxin-like domain 118 239 8.1E-34 T 01-11-2018 IPR012336 Thioredoxin-like fold CDA09_03870 9ac389ce80a6704df1362b8fe7268633 244 SUPERFAMILY SSF54423 45 91 1.18E-6 T 01-11-2018 IPR009094 Disulphide bond isomerase DsbC/G, N-terminal domain superfamily GO:0042597 CDA09_03870 9ac389ce80a6704df1362b8fe7268633 244 ProSitePatterns PS00194 Thioredoxin family active site. 125 143 - T 01-11-2018 IPR017937 Thioredoxin, conserved site GO:0045454 CDA09_03870 9ac389ce80a6704df1362b8fe7268633 244 Gene3D G3DSA:3.40.30.10 109 243 1.7E-36 T 01-11-2018 CDA09_03870 9ac389ce80a6704df1362b8fe7268633 244 SUPERFAMILY SSF52833 97 240 6.21E-34 T 01-11-2018 IPR036249 Thioredoxin-like superfamily CDA09_03235 923a4af147ed717b5f77ac4f86fbd142 574 SUPERFAMILY SSF48695 14 435 3.48E-23 T 01-11-2018 IPR036280 Multiheme cytochrome superfamily CDA09_03235 923a4af147ed717b5f77ac4f86fbd142 574 Gene3D G3DSA:1.10.1130.10 264 399 2.9E-7 T 01-11-2018 CDA09_03235 923a4af147ed717b5f77ac4f86fbd142 574 Pfam PF09699 Doubled CXXCH motif (Paired_CXXCH_1) 322 373 3.4E-6 T 01-11-2018 IPR010177 Doubled CXXCH motif CDA09_03235 923a4af147ed717b5f77ac4f86fbd142 574 Pfam PF09699 Doubled CXXCH motif (Paired_CXXCH_1) 183 215 3.0E-6 T 01-11-2018 IPR010177 Doubled CXXCH motif CDA09_03235 923a4af147ed717b5f77ac4f86fbd142 574 Pfam PF09699 Doubled CXXCH motif (Paired_CXXCH_1) 428 485 1.4E-6 T 01-11-2018 IPR010177 Doubled CXXCH motif CDA09_03235 923a4af147ed717b5f77ac4f86fbd142 574 Pfam PF09699 Doubled CXXCH motif (Paired_CXXCH_1) 246 282 2.6E-6 T 01-11-2018 IPR010177 Doubled CXXCH motif CDA09_03235 923a4af147ed717b5f77ac4f86fbd142 574 TIGRFAM TIGR01905 paired_CXXCH_1: doubled CXXCH domain 246 282 2.1E-6 T 01-11-2018 IPR010177 Doubled CXXCH motif CDA09_03235 923a4af147ed717b5f77ac4f86fbd142 574 SUPERFAMILY SSF48695 319 519 1.78E-10 T 01-11-2018 IPR036280 Multiheme cytochrome superfamily CDA09_17410 77de866604644b21a78cd6f1e5c218bf 311 TIGRFAM TIGR02394 rpoS_proteo: RNA polymerase sigma factor RpoS 33 311 1.2E-131 T 01-11-2018 IPR012761 RNA polymerase sigma factor RpoS GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 CDA09_17410 77de866604644b21a78cd6f1e5c218bf 311 SUPERFAMILY SSF88659 150 224 7.06E-10 T 01-11-2018 IPR013324 RNA polymerase sigma factor, region 3/4-like CDA09_17410 77de866604644b21a78cd6f1e5c218bf 311 Pfam PF00140 Sigma-70 factor, region 1.2 39 72 1.1E-13 T 01-11-2018 IPR009042 RNA polymerase sigma-70 region 1.2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 CDA09_17410 77de866604644b21a78cd6f1e5c218bf 311 Pfam PF04542 Sigma-70 region 2 77 146 3.8E-20 T 01-11-2018 IPR007627 RNA polymerase sigma-70 region 2 GO:0003700|GO:0006352|GO:0006355 CDA09_17410 77de866604644b21a78cd6f1e5c218bf 311 Hamap MF_00959 RNA polymerase sigma factor RpoS [rpoS]. 2 311 37.953 T 01-11-2018 IPR012761 RNA polymerase sigma factor RpoS GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 CDA09_17410 77de866604644b21a78cd6f1e5c218bf 311 Gene3D G3DSA:1.10.601.10 71 149 7.8E-45 T 01-11-2018 CDA09_17410 77de866604644b21a78cd6f1e5c218bf 311 ProSitePatterns PS00715 Sigma-70 factors family signature 1. 101 114 - T 01-11-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 CDA09_17410 77de866604644b21a78cd6f1e5c218bf 311 Pfam PF04539 Sigma-70 region 3 157 230 1.3E-12 T 01-11-2018 IPR007624 RNA polymerase sigma-70 region 3 GO:0003700|GO:0006352|GO:0006355 CDA09_17410 77de866604644b21a78cd6f1e5c218bf 311 Gene3D G3DSA:1.10.10.10 150 225 1.2E-16 T 01-11-2018 IPR036388 Winged helix-like DNA-binding domain superfamily CDA09_17410 77de866604644b21a78cd6f1e5c218bf 311 TIGRFAM TIGR02937 sigma70-ECF: RNA polymerase sigma factor, sigma-70 family 73 298 4.8E-36 T 01-11-2018 IPR014284 RNA polymerase sigma-70 like domain GO:0003700|GO:0006352|GO:0006355 CDA09_17410 77de866604644b21a78cd6f1e5c218bf 311 Gene3D G3DSA:1.20.120.1810 36 70 7.4E-5 T 01-11-2018 CDA09_17410 77de866604644b21a78cd6f1e5c218bf 311 PRINTS PR00046 Major sigma-70 factor signature 285 296 3.5E-23 T 01-11-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 CDA09_17410 77de866604644b21a78cd6f1e5c218bf 311 PRINTS PR00046 Major sigma-70 factor signature 270 285 3.5E-23 T 01-11-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 CDA09_17410 77de866604644b21a78cd6f1e5c218bf 311 PRINTS PR00046 Major sigma-70 factor signature 249 261 3.5E-23 T 01-11-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 CDA09_17410 77de866604644b21a78cd6f1e5c218bf 311 PRINTS PR00046 Major sigma-70 factor signature 101 114 3.5E-23 T 01-11-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 CDA09_17410 77de866604644b21a78cd6f1e5c218bf 311 PRINTS PR00046 Major sigma-70 factor signature 125 133 3.5E-23 T 01-11-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 CDA09_17410 77de866604644b21a78cd6f1e5c218bf 311 Gene3D G3DSA:1.10.10.10 227 305 3.0E-18 T 01-11-2018 IPR036388 Winged helix-like DNA-binding domain superfamily CDA09_17410 77de866604644b21a78cd6f1e5c218bf 311 SUPERFAMILY SSF88946 39 147 7.33E-46 T 01-11-2018 IPR013325 RNA polymerase sigma factor, region 2 GO:0003700|GO:0006352|GO:0006355 CDA09_17410 77de866604644b21a78cd6f1e5c218bf 311 ProSitePatterns PS00716 Sigma-70 factors family signature 2. 270 296 - T 01-11-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 CDA09_17410 77de866604644b21a78cd6f1e5c218bf 311 SUPERFAMILY SSF88659 208 303 5.23E-22 T 01-11-2018 IPR013324 RNA polymerase sigma factor, region 3/4-like CDA09_17410 77de866604644b21a78cd6f1e5c218bf 311 Pfam PF04545 Sigma-70, region 4 246 298 5.6E-13 T 01-11-2018 IPR007630 RNA polymerase sigma-70 region 4 GO:0003700|GO:0006352|GO:0006355 CDA09_05235 c3b32af9618b8a5448a155b4015c33cf 219 TIGRFAM TIGR01509 HAD-SF-IA-v3: HAD hydrolase, family IA, variant 3 50 189 1.4E-14 T 01-11-2018 IPR006439 HAD hydrolase, subfamily IA GO:0016787 CDA09_05235 c3b32af9618b8a5448a155b4015c33cf 219 Gene3D G3DSA:3.40.50.1000 81 216 1.9E-25 T 01-11-2018 IPR023214 HAD superfamily CDA09_05235 c3b32af9618b8a5448a155b4015c33cf 219 Pfam PF13419 Haloacid dehalogenase-like hydrolase 11 189 6.1E-13 T 01-11-2018 CDA09_05235 c3b32af9618b8a5448a155b4015c33cf 219 Gene3D G3DSA:1.10.150.450 20 80 9.5E-11 T 01-11-2018 CDA09_05235 c3b32af9618b8a5448a155b4015c33cf 219 SUPERFAMILY SSF56784 9 206 4.51E-32 T 01-11-2018 IPR036412 HAD-like superfamily CDA09_05235 c3b32af9618b8a5448a155b4015c33cf 219 TIGRFAM TIGR01993 Pyr-5-nucltdase: pyrimidine 5'-nucleotidase 9 189 3.4E-56 T 01-11-2018 IPR010237 Pyrimidine 5-nucleotidase CDA09_14965 93163936a3a56420e723fa8ff4103e0a 403 ProSitePatterns PS00595 Aminotransferases class-V pyridoxal-phosphate attachment site. 196 215 - T 01-11-2018 IPR020578 Aminotransferase class-V, pyridoxal-phosphate binding site CDA09_14965 93163936a3a56420e723fa8ff4103e0a 403 TIGRFAM TIGR02006 IscS: cysteine desulfurase IscS 2 403 1.5E-225 T 01-11-2018 IPR010240 Cysteine desulfurase IscS GO:0030170|GO:0031071|GO:0044571 KEGG: 00730+2.8.1.7|MetaCyc: PWY-7250|Reactome: R-HSA-1362409|Reactome: R-HSA-947581 CDA09_14965 93163936a3a56420e723fa8ff4103e0a 403 PIRSF PIRSF005572 3 383 1.5E-136 T 01-11-2018 IPR016454 Cysteine desulfurase KEGG: 00730+2.8.1.7|MetaCyc: PWY-7250 CDA09_14965 93163936a3a56420e723fa8ff4103e0a 403 Gene3D G3DSA:3.40.640.10 17 261 1.5E-163 T 01-11-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 CDA09_14965 93163936a3a56420e723fa8ff4103e0a 403 Gene3D G3DSA:3.90.1150.10 6 374 1.5E-163 T 01-11-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 CDA09_14965 93163936a3a56420e723fa8ff4103e0a 403 Pfam PF00266 Aminotransferase class-V 6 367 8.6E-89 T 01-11-2018 IPR000192 Aminotransferase class V domain CDA09_14965 93163936a3a56420e723fa8ff4103e0a 403 SUPERFAMILY SSF53383 5 390 4.47E-116 T 01-11-2018 IPR015424 Pyridoxal phosphate-dependent transferase CDA09_14965 93163936a3a56420e723fa8ff4103e0a 403 Hamap MF_00331 Cysteine desulfurase IscS [iscS]. 2 394 54.829 T 01-11-2018 IPR010240 Cysteine desulfurase IscS GO:0030170|GO:0031071|GO:0044571 KEGG: 00730+2.8.1.7|MetaCyc: PWY-7250|Reactome: R-HSA-1362409|Reactome: R-HSA-947581 CDA09_11495 0928a5b1b39f942fe963c821b1b32352 274 TIGRFAM TIGR04557 fuse_rel_SoxYZ: quinoprotein dehydrogenase-associated SoxYZ-like carrier 32 262 8.0E-80 T 01-11-2018 IPR030831 Quinoprotein dehydrogenase-associated SoxYZ-like carrier CDA09_11495 0928a5b1b39f942fe963c821b1b32352 274 Pfam PF08770 Sulphur oxidation protein SoxZ 177 264 1.4E-24 T 01-11-2018 IPR014880 Sulphur oxidation protein SoxZ CDA09_11495 0928a5b1b39f942fe963c821b1b32352 274 Gene3D G3DSA:2.60.40.10 165 268 1.2E-19 T 01-11-2018 IPR013783 Immunoglobulin-like fold CDA09_11495 0928a5b1b39f942fe963c821b1b32352 274 Gene3D G3DSA:2.60.40.2470 16 149 1.2E-31 T 01-11-2018 IPR038162 Ig-like SoxY domain superfamily CDA09_11495 0928a5b1b39f942fe963c821b1b32352 274 Pfam PF13501 Sulfur oxidation protein SoxY 40 148 1.1E-32 T 01-11-2018 IPR032711 Ig-like SoxY domain CDA09_11495 0928a5b1b39f942fe963c821b1b32352 274 SUPERFAMILY SSF81296 163 267 1.68E-23 T 01-11-2018 IPR014756 Immunoglobulin E-set CDA09_01100 b0d6bd9c6c7d764351d104ac09a76d86 147 Pfam PF01957 NfeD-like C-terminal, partner-binding 7 146 1.8E-15 T 01-11-2018 IPR002810 NfeD-like, C-terminal domain CDA09_01100 b0d6bd9c6c7d764351d104ac09a76d86 147 Gene3D G3DSA:2.40.50.140 77 147 7.4E-7 T 01-11-2018 CDA09_01100 b0d6bd9c6c7d764351d104ac09a76d86 147 SUPERFAMILY SSF141322 79 146 4.71E-7 T 01-11-2018 CDA09_04985 44fb6aba4533ee747a56cd443638dde3 392 Gene3D G3DSA:1.25.40.10 152 391 9.0E-11 T 01-11-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 CDA09_04985 44fb6aba4533ee747a56cd443638dde3 392 Pfam PF07219 HemY protein N-terminus 26 131 4.7E-31 T 01-11-2018 IPR010817 HemY, N-terminal CDA09_04985 44fb6aba4533ee747a56cd443638dde3 392 SUPERFAMILY SSF48452 272 386 3.25E-6 T 01-11-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 CDA09_04985 44fb6aba4533ee747a56cd443638dde3 392 TIGRFAM TIGR00540 TPR_hemY_coli: heme biosynthesis-associated TPR protein 2 386 4.8E-109 T 01-11-2018 IPR005254 Heme biosynthesis-associated TPR protein GO:0016020|GO:0042168 CDA09_16870 28b8f11570a9fab5b499276d88c064a0 210 Gene3D G3DSA:1.10.760.10 51 210 1.4E-70 T 01-11-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 CDA09_16870 28b8f11570a9fab5b499276d88c064a0 210 SUPERFAMILY SSF46626 17 202 7.87E-29 T 01-11-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 CDA09_16870 28b8f11570a9fab5b499276d88c064a0 210 TIGRFAM TIGR00781 ccoO: cytochrome c oxidase, cbb3-type, subunit II 6 187 5.7E-83 T 01-11-2018 IPR003468 Cytochrome c oxidase, monohaem subunit/FixO CDA09_16870 28b8f11570a9fab5b499276d88c064a0 210 Pfam PF02433 Cytochrome C oxidase, mono-heme subunit/FixO 6 187 7.1E-78 T 01-11-2018 IPR003468 Cytochrome c oxidase, monohaem subunit/FixO CDA09_13275 6e51d54525e6f1d0491f2cc6503455e3 372 SUPERFAMILY SSF50331 242 352 4.25E-11 T 01-11-2018 IPR008995 Molybdate/tungstate binding, C-terminal CDA09_13275 6e51d54525e6f1d0491f2cc6503455e3 372 Pfam PF00005 ABC transporter 21 163 3.9E-31 T 01-11-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 CDA09_13275 6e51d54525e6f1d0491f2cc6503455e3 372 ProSitePatterns PS00211 ABC transporters family signature. 136 150 - T 01-11-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 CDA09_13275 6e51d54525e6f1d0491f2cc6503455e3 372 Gene3D G3DSA:3.40.50.300 3 223 3.4E-61 T 01-11-2018 CDA09_13275 6e51d54525e6f1d0491f2cc6503455e3 372 Gene3D G3DSA:2.40.50.940 224 352 9.4E-10 T 01-11-2018 CDA09_13275 6e51d54525e6f1d0491f2cc6503455e3 372 SMART SM00382 28 213 1.7E-16 T 01-11-2018 IPR003593 AAA+ ATPase domain CDA09_13275 6e51d54525e6f1d0491f2cc6503455e3 372 Pfam PF08402 TOBE domain 282 351 5.6E-10 T 01-11-2018 IPR013611 Transport-associated OB, type 2 GO:0005524|GO:0022857|GO:0043190|GO:0055085 CDA09_13275 6e51d54525e6f1d0491f2cc6503455e3 372 SUPERFAMILY SSF52540 4 239 2.21E-80 T 01-11-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CDA09_13275 6e51d54525e6f1d0491f2cc6503455e3 372 Gene3D G3DSA:2.40.50.140 289 343 9.4E-10 T 01-11-2018 CDA09_03390 ffa944710ef2fa17abd22116a9d43e12 449 PRINTS PR00344 Bacterial sensor protein C-terminal signature 401 419 1.9E-15 T 01-11-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 CDA09_03390 ffa944710ef2fa17abd22116a9d43e12 449 PRINTS PR00344 Bacterial sensor protein C-terminal signature 366 380 1.9E-15 T 01-11-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 CDA09_03390 ffa944710ef2fa17abd22116a9d43e12 449 PRINTS PR00344 Bacterial sensor protein C-terminal signature 384 394 1.9E-15 T 01-11-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 CDA09_03390 ffa944710ef2fa17abd22116a9d43e12 449 PRINTS PR00344 Bacterial sensor protein C-terminal signature 425 438 1.9E-15 T 01-11-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 CDA09_03390 ffa944710ef2fa17abd22116a9d43e12 449 Gene3D G3DSA:1.10.287.130 180 288 1.8E-17 T 01-11-2018 CDA09_03390 ffa944710ef2fa17abd22116a9d43e12 449 SUPERFAMILY SSF55874 297 440 1.26E-34 T 01-11-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily CDA09_03390 ffa944710ef2fa17abd22116a9d43e12 449 SMART SM00388 235 293 2.4E-4 T 01-11-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 CDA09_03390 ffa944710ef2fa17abd22116a9d43e12 449 SUPERFAMILY SSF158472 182 232 7.59E-5 T 01-11-2018 CDA09_03390 ffa944710ef2fa17abd22116a9d43e12 449 SMART SM00387 332 441 7.6E-30 T 01-11-2018 IPR003594 Histidine kinase/HSP90-like ATPase CDA09_03390 ffa944710ef2fa17abd22116a9d43e12 449 SUPERFAMILY SSF47384 219 289 4.51E-10 T 01-11-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 CDA09_03390 ffa944710ef2fa17abd22116a9d43e12 449 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 335 439 1.3E-20 T 01-11-2018 IPR003594 Histidine kinase/HSP90-like ATPase CDA09_03390 ffa944710ef2fa17abd22116a9d43e12 449 SMART SM00304 182 234 7.9E-9 T 01-11-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 CDA09_03390 ffa944710ef2fa17abd22116a9d43e12 449 Gene3D G3DSA:3.30.565.10 297 440 4.4E-31 T 01-11-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily CDA09_03390 ffa944710ef2fa17abd22116a9d43e12 449 Pfam PF00672 HAMP domain 182 229 2.5E-9 T 01-11-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 CDA09_06880 d3fcbd6d9b3543e491bf1eb878835545 437 Pfam PF02465 Flagellar hook-associated protein 2 N-terminus 10 106 1.9E-21 T 01-11-2018 IPR003481 Flagellar hook-associated protein 2, N-terminal GO:0009424 CDA09_06880 d3fcbd6d9b3543e491bf1eb878835545 437 Pfam PF07195 Flagellar hook-associated protein 2 C-terminus 198 420 9.8E-52 T 01-11-2018 IPR010809 Flagellar hook-associated protein 2, C-terminal GO:0007155|GO:0009288 CDA09_04585 50934f59bd8764e00af730a58d46c546 562 Gene3D G3DSA:3.40.50.12780 12 437 3.0E-117 T 01-11-2018 CDA09_04585 50934f59bd8764e00af730a58d46c546 562 Gene3D G3DSA:3.30.300.310 439 544 1.7E-21 T 01-11-2018 CDA09_04585 50934f59bd8764e00af730a58d46c546 562 Pfam PF13193 AMP-binding enzyme C-terminal domain 452 529 5.5E-18 T 01-11-2018 IPR025110 AMP-binding enzyme, C-terminal domain CDA09_04585 50934f59bd8764e00af730a58d46c546 562 Pfam PF00501 AMP-binding enzyme 46 443 2.2E-78 T 01-11-2018 IPR000873 AMP-dependent synthetase/ligase GO:0003824 CDA09_04585 50934f59bd8764e00af730a58d46c546 562 ProSitePatterns PS00455 Putative AMP-binding domain signature. 198 209 - T 01-11-2018 IPR020845 AMP-binding, conserved site CDA09_04585 50934f59bd8764e00af730a58d46c546 562 SUPERFAMILY SSF56801 14 541 1.96E-134 T 01-11-2018 CDA09_04300 98ba57ed7b4de2a11d8e95b874940e08 195 ProSitePatterns PS00955 Imidazoleglycerol-phosphate dehydratase signature 2. 156 168 - T 01-11-2018 IPR020565 Imidazoleglycerol-phosphate dehydratase, conserved site GO:0000105|GO:0004424 KEGG: 00340+4.2.1.19 CDA09_04300 98ba57ed7b4de2a11d8e95b874940e08 195 SUPERFAMILY SSF54211 1 86 2.91E-34 T 01-11-2018 IPR020568 Ribosomal protein S5 domain 2-type fold CDA09_04300 98ba57ed7b4de2a11d8e95b874940e08 195 Gene3D G3DSA:3.30.230.40 90 195 2.7E-38 T 01-11-2018 IPR038494 Imidazole glycerol phosphate dehydratase domain superfamily KEGG: 00340+4.2.1.19 CDA09_04300 98ba57ed7b4de2a11d8e95b874940e08 195 ProSitePatterns PS00954 Imidazoleglycerol-phosphate dehydratase signature 1. 61 74 - T 01-11-2018 IPR020565 Imidazoleglycerol-phosphate dehydratase, conserved site GO:0000105|GO:0004424 KEGG: 00340+4.2.1.19 CDA09_04300 98ba57ed7b4de2a11d8e95b874940e08 195 SUPERFAMILY SSF54211 88 178 5.16E-34 T 01-11-2018 IPR020568 Ribosomal protein S5 domain 2-type fold CDA09_04300 98ba57ed7b4de2a11d8e95b874940e08 195 Pfam PF00475 Imidazoleglycerol-phosphate dehydratase 31 174 4.7E-65 T 01-11-2018 IPR000807 Imidazoleglycerol-phosphate dehydratase GO:0000105|GO:0004424 KEGG: 00340+4.2.1.19 CDA09_04300 98ba57ed7b4de2a11d8e95b874940e08 195 Gene3D G3DSA:3.30.230.40 1 88 3.5E-38 T 01-11-2018 IPR038494 Imidazole glycerol phosphate dehydratase domain superfamily KEGG: 00340+4.2.1.19 CDA09_04300 98ba57ed7b4de2a11d8e95b874940e08 195 Hamap MF_00076 Imidazoleglycerol-phosphate dehydratase [hisB]. 2 195 42.663 T 01-11-2018 IPR000807 Imidazoleglycerol-phosphate dehydratase GO:0000105|GO:0004424 KEGG: 00340+4.2.1.19 CDA09_02585 03d09f7108ad95dd84a6ce77437d611e 593 Pfam PF00664 ABC transporter transmembrane region 23 292 6.1E-45 T 01-11-2018 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0016021|GO:0042626|GO:0055085 CDA09_02585 03d09f7108ad95dd84a6ce77437d611e 593 SUPERFAMILY SSF90123 9 323 3.01E-74 T 01-11-2018 IPR036640 ABC transporter type 1, transmembrane domain superfamily GO:0005524|GO:0016021 CDA09_02585 03d09f7108ad95dd84a6ce77437d611e 593 Gene3D G3DSA:1.20.1560.10 1 324 6.2E-80 T 01-11-2018 IPR036640 ABC transporter type 1, transmembrane domain superfamily GO:0005524|GO:0016021 CDA09_02585 03d09f7108ad95dd84a6ce77437d611e 593 ProSitePatterns PS00211 ABC transporters family signature. 475 489 - T 01-11-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 CDA09_02585 03d09f7108ad95dd84a6ce77437d611e 593 Pfam PF00005 ABC transporter 355 503 1.2E-32 T 01-11-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 CDA09_02585 03d09f7108ad95dd84a6ce77437d611e 593 SMART SM00382 363 549 9.1E-21 T 01-11-2018 IPR003593 AAA+ ATPase domain CDA09_02585 03d09f7108ad95dd84a6ce77437d611e 593 Gene3D G3DSA:3.40.50.300 325 573 2.7E-91 T 01-11-2018 CDA09_02585 03d09f7108ad95dd84a6ce77437d611e 593 TIGRFAM TIGR02203 MsbA_lipidA: lipid A export permease/ATP-binding protein MsbA 8 570 2.3E-212 T 01-11-2018 IPR011917 ABC transporter, lipid A export, MsbA GO:0005524|GO:0016021|GO:0034040 CDA09_02585 03d09f7108ad95dd84a6ce77437d611e 593 SUPERFAMILY SSF52540 331 570 2.41E-88 T 01-11-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CDA09_19575 5c6e6080cdab93c9f42fe8328d9ca8bf 232 PIRSF PIRSF002155 1 227 4.4E-77 T 01-11-2018 IPR002143 Ribosomal protein L1 GO:0003723|GO:0003735|GO:0006412|GO:0015934 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 CDA09_19575 5c6e6080cdab93c9f42fe8328d9ca8bf 232 Gene3D G3DSA:3.40.50.790 68 159 4.6E-79 T 01-11-2018 IPR016095 Ribosomal protein L1, 3-layer alpha/beta-sandwich CDA09_19575 5c6e6080cdab93c9f42fe8328d9ca8bf 232 Gene3D G3DSA:3.30.190.20 25 222 4.6E-79 T 01-11-2018 CDA09_19575 5c6e6080cdab93c9f42fe8328d9ca8bf 232 Pfam PF00687 Ribosomal protein L1p/L10e family 31 219 5.9E-51 T 01-11-2018 IPR028364 Ribosomal protein L1/ribosomal biogenesis protein CDA09_19575 5c6e6080cdab93c9f42fe8328d9ca8bf 232 ProSitePatterns PS01199 Ribosomal protein L1 signature. 121 139 - T 01-11-2018 IPR023673 Ribosomal protein L1, conserved site Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 CDA09_19575 5c6e6080cdab93c9f42fe8328d9ca8bf 232 Hamap MF_01318_B 50S ribosomal protein L1 [rplA]. 2 229 43.343 T 01-11-2018 IPR005878 Ribosomal protein L1, bacterial-type GO:0003723|GO:0003735|GO:0006412|GO:0015934 CDA09_19575 5c6e6080cdab93c9f42fe8328d9ca8bf 232 TIGRFAM TIGR01169 rplA_bact: ribosomal protein uL1 3 226 8.8E-104 T 01-11-2018 IPR005878 Ribosomal protein L1, bacterial-type GO:0003723|GO:0003735|GO:0006412|GO:0015934 CDA09_19575 5c6e6080cdab93c9f42fe8328d9ca8bf 232 SUPERFAMILY SSF56808 6 225 1.09E-81 T 01-11-2018 IPR023674 Ribosomal protein L1-like CDA09_02790 c880f3bae72f6ec78bd7ca03d19a7673 132 TIGRFAM TIGR00494 crcB: protein CrcB 13 125 2.2E-27 T 01-11-2018 IPR003691 Putative fluoride ion transporter CrcB GO:0016021 CDA09_02790 c880f3bae72f6ec78bd7ca03d19a7673 132 Hamap MF_00454 Putative fluoride ion transporter CrcB [crcB]. 11 128 18.37 T 01-11-2018 IPR003691 Putative fluoride ion transporter CrcB GO:0016021 CDA09_02790 c880f3bae72f6ec78bd7ca03d19a7673 132 Pfam PF02537 CrcB-like protein, Camphor Resistance (CrcB) 13 123 9.4E-24 T 01-11-2018 IPR003691 Putative fluoride ion transporter CrcB GO:0016021 CDA09_22865 e0a98dc68cb1888a16300ec962e7411d 651 SMART SM00257 5 51 6.2E-11 T 01-11-2018 IPR018392 LysM domain CDA09_22865 e0a98dc68cb1888a16300ec962e7411d 651 Gene3D G3DSA:1.10.530.10 222 408 4.5E-28 T 01-11-2018 CDA09_22865 e0a98dc68cb1888a16300ec962e7411d 651 Pfam PF01476 LysM domain 6 51 2.8E-10 T 01-11-2018 IPR018392 LysM domain CDA09_22865 e0a98dc68cb1888a16300ec962e7411d 651 SUPERFAMILY SSF51261 505 645 8.89E-23 T 01-11-2018 IPR011055 Duplicated hybrid motif CDA09_22865 e0a98dc68cb1888a16300ec962e7411d 651 Gene3D G3DSA:3.10.350.10 2 62 8.0E-11 T 01-11-2018 IPR036779 LysM domain superfamily CDA09_22865 e0a98dc68cb1888a16300ec962e7411d 651 SUPERFAMILY SSF54106 4 51 4.71E-9 T 01-11-2018 CDA09_22865 e0a98dc68cb1888a16300ec962e7411d 651 SUPERFAMILY SSF53955 225 369 5.34E-6 T 01-11-2018 IPR023346 Lysozyme-like domain superfamily CDA09_22865 e0a98dc68cb1888a16300ec962e7411d 651 Gene3D G3DSA:2.70.70.10 464 646 5.4E-24 T 01-11-2018 IPR011055 Duplicated hybrid motif CDA09_22865 e0a98dc68cb1888a16300ec962e7411d 651 Pfam PF01551 Peptidase family M23 513 629 2.5E-15 T 01-11-2018 IPR016047 Peptidase M23 CDA09_12145 8229cc0ac479e776c4ef497925527de9 301 Gene3D G3DSA:3.30.420.40 132 274 5.5E-66 T 01-11-2018 CDA09_12145 8229cc0ac479e776c4ef497925527de9 301 Gene3D G3DSA:3.30.420.40 41 290 5.5E-66 T 01-11-2018 CDA09_12145 8229cc0ac479e776c4ef497925527de9 301 Pfam PF01869 BadF/BadG/BcrA/BcrD ATPase family 41 291 1.9E-58 T 01-11-2018 IPR002731 ATPase, BadF/BadG/BcrA/BcrD type Reactome: R-HSA-446210 CDA09_12145 8229cc0ac479e776c4ef497925527de9 301 TIGRFAM TIGR03192 benz_CoA_bzdQ: benzoyl-CoA reductase, bzd-type, Q subunit 6 298 4.0E-204 T 01-11-2018 IPR017605 Benzoyl-CoA reductase, bzd-type, Q subunit CDA09_12145 8229cc0ac479e776c4ef497925527de9 301 SUPERFAMILY SSF53067 40 292 5.18E-29 T 01-11-2018 CDA09_12145 8229cc0ac479e776c4ef497925527de9 301 TIGRFAM TIGR00241 CoA_E_activ: putative CoA-substrate-specific enzyme activase 38 289 8.6E-69 T 01-11-2018 IPR008275 CoA enzyme activase CDA09_04660 fef349ab654bf065f7327dd945d13cb1 333 Hamap MF_01855 Fructose-1,6-bisphosphatase class 1 [fbp]. 4 332 46.179 T 01-11-2018 IPR000146 Fructose-1,6-bisphosphatase class 1 GO:0005975|GO:0016791 KEGG: 00010+3.1.3.11|KEGG: 00030+3.1.3.11|KEGG: 00051+3.1.3.11|KEGG: 00680+3.1.3.11|KEGG: 00710+3.1.3.11|MetaCyc: PWY-5484|Reactome: R-HSA-70263 CDA09_04660 fef349ab654bf065f7327dd945d13cb1 333 Pfam PF00316 Fructose-1-6-bisphosphatase, N-terminal domain 5 193 5.6E-64 T 01-11-2018 IPR033391 Fructose-1-6-bisphosphatase class I, N-terminal KEGG: 00010+3.1.3.11|KEGG: 00030+3.1.3.11|KEGG: 00051+3.1.3.11|KEGG: 00680+3.1.3.11|KEGG: 00710+3.1.3.11|MetaCyc: PWY-5484|Reactome: R-HSA-70263 CDA09_04660 fef349ab654bf065f7327dd945d13cb1 333 Gene3D G3DSA:3.30.540.10 1 193 5.8E-72 T 01-11-2018 CDA09_04660 fef349ab654bf065f7327dd945d13cb1 333 SUPERFAMILY SSF56655 3 330 3.52E-114 T 01-11-2018 CDA09_04660 fef349ab654bf065f7327dd945d13cb1 333 Gene3D G3DSA:3.40.190.80 195 329 5.1E-53 T 01-11-2018 CDA09_04660 fef349ab654bf065f7327dd945d13cb1 333 PIRSF PIRSF500210 1 333 3.7E-123 T 01-11-2018 IPR028343 Fructose-1,6-bisphosphatase GO:0042132 KEGG: 00010+3.1.3.11|KEGG: 00030+3.1.3.11|KEGG: 00051+3.1.3.11|KEGG: 00680+3.1.3.11|KEGG: 00710+3.1.3.11|MetaCyc: PWY-5484|Reactome: R-HSA-70263 CDA09_04660 fef349ab654bf065f7327dd945d13cb1 333 PRINTS PR00115 Fructose-1,6-bisphosphatase signature 28 55 1.6E-69 T 01-11-2018 IPR028343 Fructose-1,6-bisphosphatase GO:0042132 KEGG: 00010+3.1.3.11|KEGG: 00030+3.1.3.11|KEGG: 00051+3.1.3.11|KEGG: 00680+3.1.3.11|KEGG: 00710+3.1.3.11|MetaCyc: PWY-5484|Reactome: R-HSA-70263 CDA09_04660 fef349ab654bf065f7327dd945d13cb1 333 PRINTS PR00115 Fructose-1,6-bisphosphatase signature 65 91 1.6E-69 T 01-11-2018 IPR028343 Fructose-1,6-bisphosphatase GO:0042132 KEGG: 00010+3.1.3.11|KEGG: 00030+3.1.3.11|KEGG: 00051+3.1.3.11|KEGG: 00680+3.1.3.11|KEGG: 00710+3.1.3.11|MetaCyc: PWY-5484|Reactome: R-HSA-70263 CDA09_04660 fef349ab654bf065f7327dd945d13cb1 333 PRINTS PR00115 Fructose-1,6-bisphosphatase signature 178 201 1.6E-69 T 01-11-2018 IPR028343 Fructose-1,6-bisphosphatase GO:0042132 KEGG: 00010+3.1.3.11|KEGG: 00030+3.1.3.11|KEGG: 00051+3.1.3.11|KEGG: 00680+3.1.3.11|KEGG: 00710+3.1.3.11|MetaCyc: PWY-5484|Reactome: R-HSA-70263 CDA09_04660 fef349ab654bf065f7327dd945d13cb1 333 PRINTS PR00115 Fructose-1,6-bisphosphatase signature 147 170 1.6E-69 T 01-11-2018 IPR028343 Fructose-1,6-bisphosphatase GO:0042132 KEGG: 00010+3.1.3.11|KEGG: 00030+3.1.3.11|KEGG: 00051+3.1.3.11|KEGG: 00680+3.1.3.11|KEGG: 00710+3.1.3.11|MetaCyc: PWY-5484|Reactome: R-HSA-70263 CDA09_04660 fef349ab654bf065f7327dd945d13cb1 333 PRINTS PR00115 Fructose-1,6-bisphosphatase signature 306 331 1.6E-69 T 01-11-2018 IPR028343 Fructose-1,6-bisphosphatase GO:0042132 KEGG: 00010+3.1.3.11|KEGG: 00030+3.1.3.11|KEGG: 00051+3.1.3.11|KEGG: 00680+3.1.3.11|KEGG: 00710+3.1.3.11|MetaCyc: PWY-5484|Reactome: R-HSA-70263 CDA09_04660 fef349ab654bf065f7327dd945d13cb1 333 PRINTS PR00115 Fructose-1,6-bisphosphatase signature 204 231 1.6E-69 T 01-11-2018 IPR028343 Fructose-1,6-bisphosphatase GO:0042132 KEGG: 00010+3.1.3.11|KEGG: 00030+3.1.3.11|KEGG: 00051+3.1.3.11|KEGG: 00680+3.1.3.11|KEGG: 00710+3.1.3.11|MetaCyc: PWY-5484|Reactome: R-HSA-70263 CDA09_04660 fef349ab654bf065f7327dd945d13cb1 333 PIRSF PIRSF000904 1 333 1.0E-122 T 01-11-2018 IPR000146 Fructose-1,6-bisphosphatase class 1 GO:0005975|GO:0016791 KEGG: 00010+3.1.3.11|KEGG: 00030+3.1.3.11|KEGG: 00051+3.1.3.11|KEGG: 00680+3.1.3.11|KEGG: 00710+3.1.3.11|MetaCyc: PWY-5484|Reactome: R-HSA-70263 CDA09_04645 3c6a23dfebaacf1e183cb0896a42ce98 153 Pfam PF04386 Stringent starvation protein B 5 153 6.8E-35 T 01-11-2018 IPR007481 Stringent starvation protein B CDA09_04645 3c6a23dfebaacf1e183cb0896a42ce98 153 PIRSF PIRSF005276 1 153 3.1E-48 T 01-11-2018 IPR007481 Stringent starvation protein B CDA09_04645 3c6a23dfebaacf1e183cb0896a42ce98 153 SUPERFAMILY SSF101738 3 110 2.88E-44 T 01-11-2018 IPR036760 SspB-like superfamily CDA09_04645 3c6a23dfebaacf1e183cb0896a42ce98 153 Gene3D G3DSA:2.30.30.220 1 123 8.1E-47 T 01-11-2018 IPR036760 SspB-like superfamily CDA09_15425 f6f8c2cb46be759771d616392e4c36be 210 SUPERFAMILY SSF52540 7 206 4.69E-49 T 01-11-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CDA09_15425 f6f8c2cb46be759771d616392e4c36be 210 Hamap MF_00165 Thymidylate kinase [tmk]. 9 208 28.833 T 01-11-2018 IPR018094 Thymidylate kinase GO:0004798|GO:0005524|GO:0006233 KEGG: 00240+2.7.4.9|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7210|Reactome: R-HSA-499943 CDA09_15425 f6f8c2cb46be759771d616392e4c36be 210 Pfam PF02223 Thymidylate kinase 13 200 7.6E-47 T 01-11-2018 IPR039430 Thymidylate kinase-like domain KEGG: 00240+2.7.4.9|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7210 CDA09_15425 f6f8c2cb46be759771d616392e4c36be 210 TIGRFAM TIGR00041 DTMP_kinase: dTMP kinase 7 200 3.4E-49 T 01-11-2018 IPR018094 Thymidylate kinase GO:0004798|GO:0005524|GO:0006233 KEGG: 00240+2.7.4.9|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7210|Reactome: R-HSA-499943 CDA09_15425 f6f8c2cb46be759771d616392e4c36be 210 Gene3D G3DSA:3.40.50.300 4 208 2.2E-65 T 01-11-2018 CDA09_04085 31245476dc5a1267d329d2aea12df953 357 SMART SM00963 54 134 4.4E-26 T 01-11-2018 IPR013822 Signal recognition particle, SRP54 subunit, helical bundle GO:0005525|GO:0006614 Reactome: R-HSA-1799339 CDA09_04085 31245476dc5a1267d329d2aea12df953 357 Pfam PF00448 SRP54-type protein, GTPase domain 149 347 1.3E-71 T 01-11-2018 IPR000897 Signal recognition particle, SRP54 subunit, GTPase domain GO:0005525|GO:0006614 Reactome: R-HSA-1799339 CDA09_04085 31245476dc5a1267d329d2aea12df953 357 ProSitePatterns PS00300 SRP54-type proteins GTP-binding domain signature. 321 334 - T 01-11-2018 IPR000897 Signal recognition particle, SRP54 subunit, GTPase domain GO:0005525|GO:0006614 Reactome: R-HSA-1799339 CDA09_04085 31245476dc5a1267d329d2aea12df953 357 Gene3D G3DSA:3.40.50.300 145 336 1.1E-109 T 01-11-2018 CDA09_04085 31245476dc5a1267d329d2aea12df953 357 SUPERFAMILY SSF52540 99 348 2.66E-49 T 01-11-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CDA09_04085 31245476dc5a1267d329d2aea12df953 357 Hamap MF_00920 Signal recognition particle receptor FtsY [ftsY]. 77 348 59.262 T 01-11-2018 IPR004390 Signal-recognition particle receptor FtsY GO:0006614 CDA09_04085 31245476dc5a1267d329d2aea12df953 357 Pfam PF02881 SRP54-type protein, helical bundle domain 65 130 1.5E-14 T 01-11-2018 IPR013822 Signal recognition particle, SRP54 subunit, helical bundle GO:0005525|GO:0006614 Reactome: R-HSA-1799339 CDA09_04085 31245476dc5a1267d329d2aea12df953 357 SMART SM00382 147 298 8.7E-9 T 01-11-2018 IPR003593 AAA+ ATPase domain CDA09_04085 31245476dc5a1267d329d2aea12df953 357 TIGRFAM TIGR00064 ftsY: signal recognition particle-docking protein FtsY 77 347 7.2E-103 T 01-11-2018 IPR004390 Signal-recognition particle receptor FtsY GO:0006614 CDA09_04085 31245476dc5a1267d329d2aea12df953 357 Gene3D G3DSA:1.20.120.140 52 346 1.1E-109 T 01-11-2018 CDA09_04085 31245476dc5a1267d329d2aea12df953 357 SMART SM00962 148 348 2.0E-113 T 01-11-2018 IPR000897 Signal recognition particle, SRP54 subunit, GTPase domain GO:0005525|GO:0006614 Reactome: R-HSA-1799339 CDA09_09230 c7f922286e03285c186c03787d400121 258 Pfam PF00378 Enoyl-CoA hydratase/isomerase 10 256 1.9E-49 T 01-11-2018 IPR001753 Enoyl-CoA hydratase/isomerase GO:0003824 CDA09_09230 c7f922286e03285c186c03787d400121 258 SUPERFAMILY SSF52096 3 256 1.61E-69 T 01-11-2018 IPR029045 ClpP/crotonase-like domain superfamily CDA09_09230 c7f922286e03285c186c03787d400121 258 Gene3D G3DSA:1.10.12.10 204 258 1.1E-10 T 01-11-2018 IPR014748 Enoyl-CoA hydratase, C-terminal CDA09_09230 c7f922286e03285c186c03787d400121 258 ProSitePatterns PS00166 Enoyl-CoA hydratase/isomerase signature. 100 120 - T 01-11-2018 IPR018376 Enoyl-CoA hydratase/isomerase, conserved site GO:0003824 CDA09_09230 c7f922286e03285c186c03787d400121 258 Gene3D G3DSA:3.90.226.10 2 200 1.4E-60 T 01-11-2018 CDA09_07385 2fa8bb72eb5c1089fc524c2a5e5b3bee 559 SMART SM00989 117 179 1.8E-25 T 01-11-2018 IPR004096 4-vinyl reductase, 4VR CDA09_07385 2fa8bb72eb5c1089fc524c2a5e5b3bee 559 ProDom PD485437 REGULATOR TRANSCRIPTIONAL FIS-TYPE HELIX-TURN-HELIX ACTIVATOR PLASMID FAMILY PHENOL-DEGRADATIVE FIS SIGMA-54 18 132 1.0E-59 T 01-11-2018 IPR010523 Activator of aromatic catabolism CDA09_07385 2fa8bb72eb5c1089fc524c2a5e5b3bee 559 Gene3D G3DSA:3.40.50.300 219 399 4.8E-59 T 01-11-2018 CDA09_07385 2fa8bb72eb5c1089fc524c2a5e5b3bee 559 PRINTS PR01590 FIS bacterial regulatory protein HTH signature 535 555 1.6E-10 T 01-11-2018 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 CDA09_07385 2fa8bb72eb5c1089fc524c2a5e5b3bee 559 PRINTS PR01590 FIS bacterial regulatory protein HTH signature 518 535 1.6E-10 T 01-11-2018 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 CDA09_07385 2fa8bb72eb5c1089fc524c2a5e5b3bee 559 SUPERFAMILY SSF52540 228 462 4.87E-69 T 01-11-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CDA09_07385 2fa8bb72eb5c1089fc524c2a5e5b3bee 559 Pfam PF06505 Activator of aromatic catabolism 6 106 5.3E-37 T 01-11-2018 IPR010523 Activator of aromatic catabolism CDA09_07385 2fa8bb72eb5c1089fc524c2a5e5b3bee 559 Pfam PF00158 Sigma-54 interaction domain 230 396 2.0E-66 T 01-11-2018 IPR002078 RNA polymerase sigma factor 54 interaction domain GO:0005524|GO:0006355|GO:0008134 CDA09_07385 2fa8bb72eb5c1089fc524c2a5e5b3bee 559 Gene3D G3DSA:1.10.8.60 400 464 1.7E-24 T 01-11-2018 CDA09_07385 2fa8bb72eb5c1089fc524c2a5e5b3bee 559 Pfam PF02954 Bacterial regulatory protein, Fis family 512 552 4.1E-14 T 01-11-2018 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 CDA09_07385 2fa8bb72eb5c1089fc524c2a5e5b3bee 559 SMART SM00382 249 396 2.0E-9 T 01-11-2018 IPR003593 AAA+ ATPase domain CDA09_07385 2fa8bb72eb5c1089fc524c2a5e5b3bee 559 ProSitePatterns PS00688 Sigma-54 interaction domain C-terminal part signature. 442 451 - T 01-11-2018 IPR025944 Sigma-54 interaction domain, conserved site CDA09_07385 2fa8bb72eb5c1089fc524c2a5e5b3bee 559 Gene3D G3DSA:3.30.1380.20 23 185 1.7E-6 T 01-11-2018 CDA09_07385 2fa8bb72eb5c1089fc524c2a5e5b3bee 559 SUPERFAMILY SSF111126 17 176 2.04E-10 T 01-11-2018 IPR024096 NO signalling/Golgi transport ligand-binding domain superfamily CDA09_07385 2fa8bb72eb5c1089fc524c2a5e5b3bee 559 SUPERFAMILY SSF46689 442 553 1.29E-11 T 01-11-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 CDA09_07385 2fa8bb72eb5c1089fc524c2a5e5b3bee 559 Gene3D G3DSA:1.10.10.60 509 555 2.5E-11 T 01-11-2018 CDA09_07385 2fa8bb72eb5c1089fc524c2a5e5b3bee 559 Pfam PF02830 V4R domain 119 179 1.2E-17 T 01-11-2018 IPR004096 4-vinyl reductase, 4VR CDA09_07385 2fa8bb72eb5c1089fc524c2a5e5b3bee 559 ProSitePatterns PS00675 Sigma-54 interaction domain ATP-binding region A signature. 253 266 - T 01-11-2018 IPR025662 Sigma-54 interaction domain, ATP-binding site 1 CDA09_22585 c482c4dd6b09b3fdc87e2b151d82bbd1 227 ProSitePatterns PS01081 TetR-type HTH domain signature. 36 67 - T 01-11-2018 IPR023772 DNA-binding HTH domain, TetR-type, conserved site CDA09_22585 c482c4dd6b09b3fdc87e2b151d82bbd1 227 SUPERFAMILY SSF48498 92 194 2.22E-5 T 01-11-2018 IPR036271 Tetracyclin repressor-like, C-terminal domain superfamily CDA09_22585 c482c4dd6b09b3fdc87e2b151d82bbd1 227 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 24 37 1.5E-10 T 01-11-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 CDA09_22585 c482c4dd6b09b3fdc87e2b151d82bbd1 227 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 45 68 1.5E-10 T 01-11-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 CDA09_22585 c482c4dd6b09b3fdc87e2b151d82bbd1 227 Gene3D G3DSA:1.10.357.10 66 202 9.5E-11 T 01-11-2018 CDA09_22585 c482c4dd6b09b3fdc87e2b151d82bbd1 227 Pfam PF00440 Bacterial regulatory proteins, tetR family 24 67 1.9E-16 T 01-11-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 CDA09_22585 c482c4dd6b09b3fdc87e2b151d82bbd1 227 Gene3D G3DSA:1.10.10.60 13 65 7.1E-18 T 01-11-2018 CDA09_22585 c482c4dd6b09b3fdc87e2b151d82bbd1 227 SUPERFAMILY SSF46689 18 96 4.1E-18 T 01-11-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 CDA09_18160 7824d9d94653c3c5d1b60041fabe3c6f 379 SUPERFAMILY SSF52490 14 203 1.44E-62 T 01-11-2018 IPR036525 Tubulin/FtsZ, GTPase domain superfamily Reactome: R-HSA-380320 CDA09_18160 7824d9d94653c3c5d1b60041fabe3c6f 379 Gene3D G3DSA:3.40.50.1440 11 312 6.3E-106 T 01-11-2018 IPR036525 Tubulin/FtsZ, GTPase domain superfamily Reactome: R-HSA-380320 CDA09_18160 7824d9d94653c3c5d1b60041fabe3c6f 379 SMART SM00864 13 200 1.0E-100 T 01-11-2018 IPR003008 Tubulin/FtsZ, GTPase domain GO:0003924 Reactome: R-HSA-380320 CDA09_18160 7824d9d94653c3c5d1b60041fabe3c6f 379 PRINTS PR00423 Cell division protein FtsZ signature 123 144 1.6E-44 T 01-11-2018 IPR003008 Tubulin/FtsZ, GTPase domain GO:0003924 Reactome: R-HSA-380320 CDA09_18160 7824d9d94653c3c5d1b60041fabe3c6f 379 PRINTS PR00423 Cell division protein FtsZ signature 207 228 1.6E-44 T 01-11-2018 IPR003008 Tubulin/FtsZ, GTPase domain GO:0003924 Reactome: R-HSA-380320 CDA09_18160 7824d9d94653c3c5d1b60041fabe3c6f 379 PRINTS PR00423 Cell division protein FtsZ signature 95 115 1.6E-44 T 01-11-2018 IPR003008 Tubulin/FtsZ, GTPase domain GO:0003924 Reactome: R-HSA-380320 CDA09_18160 7824d9d94653c3c5d1b60041fabe3c6f 379 PRINTS PR00423 Cell division protein FtsZ signature 184 206 1.6E-44 T 01-11-2018 IPR003008 Tubulin/FtsZ, GTPase domain GO:0003924 Reactome: R-HSA-380320 CDA09_18160 7824d9d94653c3c5d1b60041fabe3c6f 379 Pfam PF00091 Tubulin/FtsZ family, GTPase domain 14 168 6.5E-34 T 01-11-2018 IPR003008 Tubulin/FtsZ, GTPase domain GO:0003924 Reactome: R-HSA-380320 CDA09_18160 7824d9d94653c3c5d1b60041fabe3c6f 379 SMART SM00865 202 320 6.4E-48 T 01-11-2018 IPR018316 Tubulin/FtsZ, 2-layer sandwich domain Reactome: R-HSA-380320 CDA09_18160 7824d9d94653c3c5d1b60041fabe3c6f 379 Pfam PF12327 FtsZ family, C-terminal domain 217 311 3.0E-28 T 01-11-2018 IPR024757 Cell division protein FtsZ, C-terminal CDA09_18160 7824d9d94653c3c5d1b60041fabe3c6f 379 SUPERFAMILY SSF55307 199 313 2.98E-36 T 01-11-2018 IPR008280 Tubulin/FtsZ, C-terminal Reactome: R-HSA-380320 CDA09_18160 7824d9d94653c3c5d1b60041fabe3c6f 379 Hamap MF_00909 Cell division protein FtsZ [ftsZ]. 9 352 34.207 T 01-11-2018 IPR000158 Cell division protein FtsZ GO:0005525 CDA09_18160 7824d9d94653c3c5d1b60041fabe3c6f 379 TIGRFAM TIGR00065 ftsZ: cell division protein FtsZ 7 316 3.5E-112 T 01-11-2018 IPR000158 Cell division protein FtsZ GO:0005525 CDA09_12465 abe6c949218a7a64a6817cd975b0acd7 1310 SUPERFAMILY SSF55326 617 812 4.45E-66 T 01-11-2018 IPR036921 PurM-like, N-terminal domain superfamily CDA09_12465 abe6c949218a7a64a6817cd975b0acd7 1310 SUPERFAMILY SSF56042 428 652 2.24E-53 T 01-11-2018 IPR036676 PurM-like, C-terminal domain superfamily CDA09_12465 abe6c949218a7a64a6817cd975b0acd7 1310 Gene3D G3DSA:3.30.1330.10 614 805 7.9E-25 T 01-11-2018 IPR036921 PurM-like, N-terminal domain superfamily CDA09_12465 abe6c949218a7a64a6817cd975b0acd7 1310 Gene3D G3DSA:3.90.650.10 419 603 3.1E-57 T 01-11-2018 IPR036676 PurM-like, C-terminal domain superfamily CDA09_12465 abe6c949218a7a64a6817cd975b0acd7 1310 Gene3D G3DSA:3.90.650.10 815 999 4.4E-28 T 01-11-2018 IPR036676 PurM-like, C-terminal domain superfamily CDA09_12465 abe6c949218a7a64a6817cd975b0acd7 1310 Gene3D G3DSA:1.10.8.750 155 215 9.0E-29 T 01-11-2018 CDA09_12465 abe6c949218a7a64a6817cd975b0acd7 1310 SMART SM01211 1058 1309 6.9E-143 T 01-11-2018 CDA09_12465 abe6c949218a7a64a6817cd975b0acd7 1310 Gene3D G3DSA:3.30.1330.10 216 418 4.6E-43 T 01-11-2018 IPR036921 PurM-like, N-terminal domain superfamily CDA09_12465 abe6c949218a7a64a6817cd975b0acd7 1310 SUPERFAMILY SSF56042 820 1051 1.42E-45 T 01-11-2018 IPR036676 PurM-like, C-terminal domain superfamily CDA09_12465 abe6c949218a7a64a6817cd975b0acd7 1310 Hamap MF_00419 Phosphoribosylformylglycinamidine synthase [purL]. 4 1310 21.071 T 01-11-2018 IPR010073 Phosphoribosylformylglycinamidine synthase GO:0004642|GO:0006189 KEGG: 00230+6.3.5.3|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|Reactome: R-HSA-73817 CDA09_12465 abe6c949218a7a64a6817cd975b0acd7 1310 Pfam PF02769 AIR synthase related protein, C-terminal domain 836 984 3.0E-9 T 01-11-2018 IPR010918 PurM-like, C-terminal domain CDA09_12465 abe6c949218a7a64a6817cd975b0acd7 1310 Pfam PF02769 AIR synthase related protein, C-terminal domain 429 586 1.6E-29 T 01-11-2018 IPR010918 PurM-like, C-terminal domain CDA09_12465 abe6c949218a7a64a6817cd975b0acd7 1310 Gene3D G3DSA:3.40.50.880 1000 1310 2.6E-130 T 01-11-2018 IPR029062 Class I glutamine amidotransferase-like CDA09_12465 abe6c949218a7a64a6817cd975b0acd7 1310 Pfam PF13507 CobB/CobQ-like glutamine amidotransferase domain 1058 1309 1.9E-101 T 01-11-2018 CDA09_12465 abe6c949218a7a64a6817cd975b0acd7 1310 SUPERFAMILY SSF55326 223 420 3.31E-59 T 01-11-2018 IPR036921 PurM-like, N-terminal domain superfamily CDA09_12465 abe6c949218a7a64a6817cd975b0acd7 1310 SUPERFAMILY SSF109736 157 222 5.1E-22 T 01-11-2018 CDA09_12465 abe6c949218a7a64a6817cd975b0acd7 1310 TIGRFAM TIGR01735 FGAM_synt: phosphoribosylformylglycinamidine synthase 7 1309 0.0 T 01-11-2018 IPR010073 Phosphoribosylformylglycinamidine synthase GO:0004642|GO:0006189 KEGG: 00230+6.3.5.3|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|Reactome: R-HSA-73817 CDA09_12465 abe6c949218a7a64a6817cd975b0acd7 1310 SUPERFAMILY SSF52317 1054 1309 4.38E-92 T 01-11-2018 IPR029062 Class I glutamine amidotransferase-like CDA09_12465 abe6c949218a7a64a6817cd975b0acd7 1310 SUPERFAMILY SSF82697 5 154 4.66E-41 T 01-11-2018 IPR036604 Phosphoribosylformylglycinamidine synthase subunit PurS-like superfamily KEGG: 00230+6.3.5.3|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|Reactome: R-HSA-73817 CDA09_11830 7b1c78c092d0dcdd59c3d779b6f99c31 540 Pfam PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain 378 516 1.6E-23 T 01-11-2018 IPR011766 Thiamine pyrophosphate enzyme, C-terminal TPP-binding GO:0003824|GO:0030976 CDA09_11830 7b1c78c092d0dcdd59c3d779b6f99c31 540 Gene3D G3DSA:3.40.50.970 1 181 1.8E-60 T 01-11-2018 CDA09_11830 7b1c78c092d0dcdd59c3d779b6f99c31 540 Gene3D G3DSA:3.40.50.970 344 540 1.0E-48 T 01-11-2018 CDA09_11830 7b1c78c092d0dcdd59c3d779b6f99c31 540 PIRSF PIRSF036565 1 539 4.4E-127 T 01-11-2018 IPR012110 Thiamine pyrophosphate (TPP)-dependent enzyme GO:0016831 CDA09_11830 7b1c78c092d0dcdd59c3d779b6f99c31 540 Pfam PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain 1 173 2.2E-39 T 01-11-2018 IPR012001 Thiamine pyrophosphate enzyme, N-terminal TPP-binding domain GO:0030976 CDA09_11830 7b1c78c092d0dcdd59c3d779b6f99c31 540 SUPERFAMILY SSF52518 349 525 7.03E-36 T 01-11-2018 IPR029061 Thiamin diphosphate-binding fold CDA09_11830 7b1c78c092d0dcdd59c3d779b6f99c31 540 Gene3D G3DSA:3.40.50.1220 183 343 1.1E-48 T 01-11-2018 CDA09_11830 7b1c78c092d0dcdd59c3d779b6f99c31 540 SUPERFAMILY SSF52518 1 176 4.95E-35 T 01-11-2018 IPR029061 Thiamin diphosphate-binding fold CDA09_11830 7b1c78c092d0dcdd59c3d779b6f99c31 540 Pfam PF00205 Thiamine pyrophosphate enzyme, central domain 192 326 1.1E-19 T 01-11-2018 IPR012000 Thiamine pyrophosphate enzyme, central domain GO:0000287|GO:0030976 CDA09_11830 7b1c78c092d0dcdd59c3d779b6f99c31 540 SUPERFAMILY SSF52467 162 330 8.81E-28 T 01-11-2018 IPR029035 DHS-like NAD/FAD-binding domain superfamily CDA09_11830 7b1c78c092d0dcdd59c3d779b6f99c31 540 TIGRFAM TIGR03394 indol_phenyl_DC: indolepyruvate/phenylpyruvate decarboxylase 2 533 3.2E-272 T 01-11-2018 IPR017765 Indole-3-pyruvate decarboxylase GO:0009851|GO:0047434 KEGG: 00380+4.1.1.74|MetaCyc: PWY-5081 CDA09_15655 12e0c80ab4675a57c1df11e5c0f41bb6 124 Gene3D G3DSA:1.10.10.10 1 122 3.2E-30 T 01-11-2018 IPR036388 Winged helix-like DNA-binding domain superfamily CDA09_15655 12e0c80ab4675a57c1df11e5c0f41bb6 124 SUPERFAMILY SSF46785 6 122 2.37E-29 T 01-11-2018 IPR036390 Winged helix DNA-binding domain superfamily CDA09_15655 12e0c80ab4675a57c1df11e5c0f41bb6 124 SMART SM00347 7 107 1.3E-19 T 01-11-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 CDA09_15655 12e0c80ab4675a57c1df11e5c0f41bb6 124 PRINTS PR00598 Bacterial regulatory protein MarR family signature 31 47 9.3E-11 T 01-11-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 CDA09_15655 12e0c80ab4675a57c1df11e5c0f41bb6 124 PRINTS PR00598 Bacterial regulatory protein MarR family signature 48 63 9.3E-11 T 01-11-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 CDA09_15655 12e0c80ab4675a57c1df11e5c0f41bb6 124 PRINTS PR00598 Bacterial regulatory protein MarR family signature 97 117 9.3E-11 T 01-11-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 CDA09_15655 12e0c80ab4675a57c1df11e5c0f41bb6 124 PRINTS PR00598 Bacterial regulatory protein MarR family signature 67 83 9.3E-11 T 01-11-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 CDA09_15655 12e0c80ab4675a57c1df11e5c0f41bb6 124 Pfam PF01047 MarR family 14 71 1.4E-16 T 01-11-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 CDA09_15655 12e0c80ab4675a57c1df11e5c0f41bb6 124 ProSitePatterns PS01117 MarR-type HTH domain signature. 46 80 - T 01-11-2018 IPR023187 Transcriptional regulator MarR-type, conserved site CDA09_05835 619b860d2443c75367b8be4adef9a262 365 SUPERFAMILY SSF52540 27 267 8.63E-70 T 01-11-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CDA09_05835 619b860d2443c75367b8be4adef9a262 365 ProSitePatterns PS00676 Sigma-54 interaction domain ATP-binding region B signature. 111 126 - T 01-11-2018 IPR025943 Sigma-54 interaction domain, ATP-binding site 2 CDA09_05835 619b860d2443c75367b8be4adef9a262 365 ProSitePatterns PS00688 Sigma-54 interaction domain C-terminal part signature. 238 247 - T 01-11-2018 IPR025944 Sigma-54 interaction domain, conserved site CDA09_05835 619b860d2443c75367b8be4adef9a262 365 Pfam PF00158 Sigma-54 interaction domain 28 191 6.0E-68 T 01-11-2018 IPR002078 RNA polymerase sigma factor 54 interaction domain GO:0005524|GO:0006355|GO:0008134 CDA09_05835 619b860d2443c75367b8be4adef9a262 365 Gene3D G3DSA:1.10.10.60 285 348 3.4E-9 T 01-11-2018 CDA09_05835 619b860d2443c75367b8be4adef9a262 365 Gene3D G3DSA:3.40.50.300 15 195 1.0E-64 T 01-11-2018 CDA09_05835 619b860d2443c75367b8be4adef9a262 365 SUPERFAMILY SSF46689 238 348 1.52E-9 T 01-11-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 CDA09_05835 619b860d2443c75367b8be4adef9a262 365 SMART SM00382 46 188 1.1E-12 T 01-11-2018 IPR003593 AAA+ ATPase domain CDA09_05835 619b860d2443c75367b8be4adef9a262 365 Gene3D G3DSA:1.10.8.60 196 273 2.0E-22 T 01-11-2018 CDA09_05835 619b860d2443c75367b8be4adef9a262 365 PRINTS PR01590 FIS bacterial regulatory protein HTH signature 329 349 3.5E-5 T 01-11-2018 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 CDA09_05835 619b860d2443c75367b8be4adef9a262 365 PRINTS PR01590 FIS bacterial regulatory protein HTH signature 312 329 3.5E-5 T 01-11-2018 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 CDA09_05835 619b860d2443c75367b8be4adef9a262 365 ProSitePatterns PS00675 Sigma-54 interaction domain ATP-binding region A signature. 50 63 - T 01-11-2018 IPR025662 Sigma-54 interaction domain, ATP-binding site 1 CDA09_06120 012de2025fdbe8ceebec8152c0b52ed5 220 SUPERFAMILY SSF52172 1 118 6.69E-38 T 01-11-2018 IPR011006 CheY-like superfamily CDA09_06120 012de2025fdbe8ceebec8152c0b52ed5 220 Gene3D G3DSA:1.10.10.10 120 218 1.1E-27 T 01-11-2018 IPR036388 Winged helix-like DNA-binding domain superfamily CDA09_06120 012de2025fdbe8ceebec8152c0b52ed5 220 Gene3D G3DSA:3.40.50.2300 1 119 3.9E-40 T 01-11-2018 CDA09_06120 012de2025fdbe8ceebec8152c0b52ed5 220 SMART SM00448 1 112 2.1E-37 T 01-11-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 CDA09_06120 012de2025fdbe8ceebec8152c0b52ed5 220 Pfam PF00072 Response regulator receiver domain 3 113 5.9E-26 T 01-11-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 CDA09_06120 012de2025fdbe8ceebec8152c0b52ed5 220 SUPERFAMILY SSF46894 118 217 3.12E-26 T 01-11-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 CDA09_06120 012de2025fdbe8ceebec8152c0b52ed5 220 SMART SM00862 145 216 1.3E-24 T 01-11-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 CDA09_06120 012de2025fdbe8ceebec8152c0b52ed5 220 Pfam PF00486 Transcriptional regulatory protein, C terminal 145 216 9.3E-23 T 01-11-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 CDA09_08205 f8f86cd51ee503da9da80ac6d2fd5e87 805 TIGRFAM TIGR01494 ATPase_P-type: HAD ATPase, P-type, family IC 257 766 2.5E-83 T 01-11-2018 IPR001757 P-type ATPase GO:0016021 Reactome: R-HSA-936837 CDA09_08205 f8f86cd51ee503da9da80ac6d2fd5e87 805 Gene3D G3DSA:2.70.150.20 279 391 1.1E-43 T 01-11-2018 CDA09_08205 f8f86cd51ee503da9da80ac6d2fd5e87 805 TIGRFAM TIGR01511 ATPase-IB1_Cu: copper-translocating P-type ATPase 195 798 1.9E-170 T 01-11-2018 CDA09_08205 f8f86cd51ee503da9da80ac6d2fd5e87 805 Gene3D G3DSA:3.40.50.1000 469 739 1.4E-83 T 01-11-2018 IPR023214 HAD superfamily CDA09_08205 f8f86cd51ee503da9da80ac6d2fd5e87 805 PRINTS PR00943 Copper-transporting ATPase signature 761 775 2.6E-13 T 01-11-2018 CDA09_08205 f8f86cd51ee503da9da80ac6d2fd5e87 805 PRINTS PR00943 Copper-transporting ATPase signature 275 293 2.6E-13 T 01-11-2018 CDA09_08205 f8f86cd51ee503da9da80ac6d2fd5e87 805 PRINTS PR00943 Copper-transporting ATPase signature 665 682 2.6E-13 T 01-11-2018 CDA09_08205 f8f86cd51ee503da9da80ac6d2fd5e87 805 PRINTS PR00943 Copper-transporting ATPase signature 255 274 2.6E-13 T 01-11-2018 CDA09_08205 f8f86cd51ee503da9da80ac6d2fd5e87 805 PRINTS PR00943 Copper-transporting ATPase signature 198 217 2.6E-13 T 01-11-2018 CDA09_08205 f8f86cd51ee503da9da80ac6d2fd5e87 805 PRINTS PR00943 Copper-transporting ATPase signature 471 486 2.6E-13 T 01-11-2018 CDA09_08205 f8f86cd51ee503da9da80ac6d2fd5e87 805 PRINTS PR00943 Copper-transporting ATPase signature 409 423 2.6E-13 T 01-11-2018 CDA09_08205 f8f86cd51ee503da9da80ac6d2fd5e87 805 TIGRFAM TIGR01525 ATPase-IB_hvy: heavy metal translocating P-type ATPase 213 797 6.1E-180 T 01-11-2018 IPR027256 P-type ATPase, subfamily IB GO:0006812|GO:0016021|GO:0019829 Reactome: R-HSA-936837 CDA09_08205 f8f86cd51ee503da9da80ac6d2fd5e87 805 SUPERFAMILY SSF81665 254 481 4.32E-11 T 01-11-2018 IPR023298 P-type ATPase, transmembrane domain superfamily Reactome: R-HSA-936837 CDA09_08205 f8f86cd51ee503da9da80ac6d2fd5e87 805 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 488 502 1.0E-25 T 01-11-2018 CDA09_08205 f8f86cd51ee503da9da80ac6d2fd5e87 805 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 336 350 1.0E-25 T 01-11-2018 CDA09_08205 f8f86cd51ee503da9da80ac6d2fd5e87 805 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 688 707 1.0E-25 T 01-11-2018 CDA09_08205 f8f86cd51ee503da9da80ac6d2fd5e87 805 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 612 623 1.0E-25 T 01-11-2018 CDA09_08205 f8f86cd51ee503da9da80ac6d2fd5e87 805 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 711 723 1.0E-25 T 01-11-2018 CDA09_08205 f8f86cd51ee503da9da80ac6d2fd5e87 805 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 635 645 1.0E-25 T 01-11-2018 CDA09_08205 f8f86cd51ee503da9da80ac6d2fd5e87 805 SMART SM00746 44 81 1.8E-10 T 01-11-2018 IPR011017 TRASH domain CDA09_08205 f8f86cd51ee503da9da80ac6d2fd5e87 805 SUPERFAMILY SSF56784 486 795 7.61E-53 T 01-11-2018 IPR036412 HAD-like superfamily CDA09_08205 f8f86cd51ee503da9da80ac6d2fd5e87 805 Gene3D G3DSA:1.10.620.20 24 113 8.3E-7 T 01-11-2018 IPR012348 Ribonucleotide reductase-like GO:0016491|GO:0055114 Reactome: R-HSA-499943 CDA09_08205 f8f86cd51ee503da9da80ac6d2fd5e87 805 SUPERFAMILY SSF81653 290 386 7.32E-27 T 01-11-2018 IPR008250 P-type ATPase, A domain superfamily Reactome: R-HSA-936837 CDA09_08205 f8f86cd51ee503da9da80ac6d2fd5e87 805 Pfam PF00122 E1-E2 ATPase 286 467 2.8E-55 T 01-11-2018 CDA09_08205 f8f86cd51ee503da9da80ac6d2fd5e87 805 Pfam PF00702 haloacid dehalogenase-like hydrolase 484 702 3.1E-36 T 01-11-2018 CDA09_08205 f8f86cd51ee503da9da80ac6d2fd5e87 805 Gene3D G3DSA:3.40.1110.10 499 619 1.4E-83 T 01-11-2018 IPR023299 P-type ATPase, cytoplasmic domain N GO:0000166 Reactome: R-HSA-936837 CDA09_08205 f8f86cd51ee503da9da80ac6d2fd5e87 805 SUPERFAMILY SSF47240 37 85 2.08E-6 T 01-11-2018 IPR009078 Ferritin-like superfamily CDA09_08205 f8f86cd51ee503da9da80ac6d2fd5e87 805 Pfam PF04945 YHS domain 43 86 6.5E-16 T 01-11-2018 IPR007029 YHS domain CDA09_08205 f8f86cd51ee503da9da80ac6d2fd5e87 805 ProSitePatterns PS00154 E1-E2 ATPases phosphorylation site. 490 496 - T 01-11-2018 IPR018303 P-type ATPase, phosphorylation site Reactome: R-HSA-936837 CDA09_20800 67bb403fa89faf5395a3a9bbfcdeb36f 405 SUPERFAMILY SSF53822 32 403 1.0E-89 T 01-11-2018 IPR028082 Periplasmic binding protein-like I CDA09_20800 67bb403fa89faf5395a3a9bbfcdeb36f 405 Gene3D G3DSA:3.40.50.2300 56 361 4.7E-107 T 01-11-2018 CDA09_20800 67bb403fa89faf5395a3a9bbfcdeb36f 405 Pfam PF13458 Periplasmic binding protein 32 368 1.0E-87 T 01-11-2018 IPR028081 Leucine-binding protein domain CDA09_20800 67bb403fa89faf5395a3a9bbfcdeb36f 405 Gene3D G3DSA:3.40.50.2300 152 369 4.7E-107 T 01-11-2018 CDA09_23010 98544f39bc7cfb07713161e8934e6aae 454 SUPERFAMILY SSF48013 41 179 2.62E-20 T 01-11-2018 IPR035926 NusB-like superfamily CDA09_23010 98544f39bc7cfb07713161e8934e6aae 454 TIGRFAM TIGR00563 rsmB: 16S rRNA (cytosine(967)-C(5))-methyltransferase 45 453 6.3E-98 T 01-11-2018 IPR004573 rRNA small subunit methyltransferase B GO:0006364|GO:0008649 CDA09_23010 98544f39bc7cfb07713161e8934e6aae 454 Pfam PF01029 NusB family 63 154 7.8E-8 T 01-11-2018 IPR006027 NusB/RsmB/TIM44 GO:0003723|GO:0006355 CDA09_23010 98544f39bc7cfb07713161e8934e6aae 454 Pfam PF01189 16S rRNA methyltransferase RsmB/F 268 450 2.3E-48 T 01-11-2018 IPR001678 SAM-dependent methyltransferase RsmB/NOP2-type GO:0008168 CDA09_23010 98544f39bc7cfb07713161e8934e6aae 454 Gene3D G3DSA:1.10.940.10 38 174 8.3E-20 T 01-11-2018 IPR035926 NusB-like superfamily CDA09_23010 98544f39bc7cfb07713161e8934e6aae 454 PRINTS PR02008 RNA (C5-cytosine) methyltransferase signature 250 264 1.0E-23 T 01-11-2018 IPR023267 RNA (C5-cytosine) methyltransferase CDA09_23010 98544f39bc7cfb07713161e8934e6aae 454 PRINTS PR02008 RNA (C5-cytosine) methyltransferase signature 435 452 1.0E-23 T 01-11-2018 IPR023267 RNA (C5-cytosine) methyltransferase CDA09_23010 98544f39bc7cfb07713161e8934e6aae 454 PRINTS PR02008 RNA (C5-cytosine) methyltransferase signature 394 410 1.0E-23 T 01-11-2018 IPR023267 RNA (C5-cytosine) methyltransferase CDA09_23010 98544f39bc7cfb07713161e8934e6aae 454 PRINTS PR02008 RNA (C5-cytosine) methyltransferase signature 344 356 1.0E-23 T 01-11-2018 IPR023267 RNA (C5-cytosine) methyltransferase CDA09_23010 98544f39bc7cfb07713161e8934e6aae 454 PRINTS PR02008 RNA (C5-cytosine) methyltransferase signature 279 289 1.0E-23 T 01-11-2018 IPR023267 RNA (C5-cytosine) methyltransferase CDA09_23010 98544f39bc7cfb07713161e8934e6aae 454 SUPERFAMILY SSF53335 168 452 3.73E-62 T 01-11-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase CDA09_23010 98544f39bc7cfb07713161e8934e6aae 454 Gene3D G3DSA:3.30.70.1170 203 258 7.2E-15 T 01-11-2018 CDA09_23010 98544f39bc7cfb07713161e8934e6aae 454 Gene3D G3DSA:3.40.50.150 259 453 2.0E-54 T 01-11-2018 CDA09_02105 706522f70babff3ae74a43087c950199 328 Pfam PF03450 CO dehydrogenase flavoprotein C-terminal domain 221 319 1.2E-9 T 01-11-2018 IPR005107 CO dehydrogenase flavoprotein, C-terminal CDA09_02105 706522f70babff3ae74a43087c950199 328 SUPERFAMILY SSF56176 5 214 1.01E-60 T 01-11-2018 IPR036318 FAD-binding, type PCMH-like superfamily GO:0050660 CDA09_02105 706522f70babff3ae74a43087c950199 328 Gene3D G3DSA:3.30.465.10 1 215 2.3E-71 T 01-11-2018 IPR016169 FAD-binding, type PCMH, subdomain 2 CDA09_02105 706522f70babff3ae74a43087c950199 328 SUPERFAMILY SSF55447 219 323 1.57E-23 T 01-11-2018 IPR036683 CO dehydrogenase flavoprotein, C-terminal domain superfamily CDA09_02105 706522f70babff3ae74a43087c950199 328 TIGRFAM TIGR03195 4hydrxCoA_B: 4-hydroxybenzoyl-CoA reductase, beta subunit 3 323 1.7E-156 T 01-11-2018 IPR017608 4-hydroxybenzoyl-CoA reductase, beta subunit KEGG: 00362+1.3.7.9|KEGG: 00627+1.3.7.9|MetaCyc: PWY-6080|MetaCyc: PWY-7046 CDA09_02105 706522f70babff3ae74a43087c950199 328 SMART SM01092 220 321 1.7E-16 T 01-11-2018 IPR005107 CO dehydrogenase flavoprotein, C-terminal CDA09_02105 706522f70babff3ae74a43087c950199 328 Gene3D G3DSA:3.30.390.50 218 325 5.6E-25 T 01-11-2018 CDA09_02105 706522f70babff3ae74a43087c950199 328 Pfam PF00941 FAD binding domain in molybdopterin dehydrogenase 6 214 8.9E-47 T 01-11-2018 IPR002346 Molybdopterin dehydrogenase, FAD-binding GO:0016491|GO:0055114 CDA09_18030 24b7340a26514d7061d4b2055d8ec249 663 SMART SM00388 440 510 1.7E-10 T 01-11-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 CDA09_18030 24b7340a26514d7061d4b2055d8ec249 663 Pfam PF00989 PAS fold 303 415 1.2E-16 T 01-11-2018 IPR013767 PAS fold GO:0006355 CDA09_18030 24b7340a26514d7061d4b2055d8ec249 663 SMART SM00086 376 418 0.0043 T 01-11-2018 IPR001610 PAC motif CDA09_18030 24b7340a26514d7061d4b2055d8ec249 663 SUPERFAMILY SSF47384 433 507 2.94E-10 T 01-11-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 CDA09_18030 24b7340a26514d7061d4b2055d8ec249 663 SMART SM00387 552 662 1.2E-30 T 01-11-2018 IPR003594 Histidine kinase/HSP90-like ATPase CDA09_18030 24b7340a26514d7061d4b2055d8ec249 663 PRINTS PR00344 Bacterial sensor protein C-terminal signature 646 659 2.7E-16 T 01-11-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 CDA09_18030 24b7340a26514d7061d4b2055d8ec249 663 PRINTS PR00344 Bacterial sensor protein C-terminal signature 622 640 2.7E-16 T 01-11-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 CDA09_18030 24b7340a26514d7061d4b2055d8ec249 663 PRINTS PR00344 Bacterial sensor protein C-terminal signature 593 607 2.7E-16 T 01-11-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 CDA09_18030 24b7340a26514d7061d4b2055d8ec249 663 PRINTS PR00344 Bacterial sensor protein C-terminal signature 611 621 2.7E-16 T 01-11-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 CDA09_18030 24b7340a26514d7061d4b2055d8ec249 663 SUPERFAMILY SSF55874 507 660 2.62E-40 T 01-11-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily CDA09_18030 24b7340a26514d7061d4b2055d8ec249 663 Gene3D G3DSA:3.30.450.20 283 445 5.6E-27 T 01-11-2018 CDA09_18030 24b7340a26514d7061d4b2055d8ec249 663 Pfam PF00512 His Kinase A (phospho-acceptor) domain 441 507 1.2E-9 T 01-11-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 CDA09_18030 24b7340a26514d7061d4b2055d8ec249 663 SMART SM00091 302 369 1.6E-6 T 01-11-2018 IPR000014 PAS domain CDA09_18030 24b7340a26514d7061d4b2055d8ec249 663 Gene3D G3DSA:3.30.565.10 509 663 3.5E-44 T 01-11-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily CDA09_18030 24b7340a26514d7061d4b2055d8ec249 663 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 553 661 7.0E-19 T 01-11-2018 IPR003594 Histidine kinase/HSP90-like ATPase CDA09_18030 24b7340a26514d7061d4b2055d8ec249 663 SUPERFAMILY SSF55785 289 416 5.96E-25 T 01-11-2018 IPR035965 PAS domain superfamily CDA09_18030 24b7340a26514d7061d4b2055d8ec249 663 Gene3D G3DSA:1.10.287.130 446 507 4.9E-21 T 01-11-2018 CDA09_18030 24b7340a26514d7061d4b2055d8ec249 663 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 299 423 4.8E-25 T 01-11-2018 IPR000014 PAS domain CDA09_11565 522087da99c300c8d84e8e31415a6a77 488 Pfam PF02788 Ribulose bisphosphate carboxylase large chain, N-terminal domain 29 149 6.7E-45 T 01-11-2018 IPR017443 Ribulose bisphosphate carboxylase, large subunit, ferrodoxin-like N-terminal GO:0015977|GO:0016984 KEGG: 00630+4.1.1.39|KEGG: 00710+4.1.1.39|MetaCyc: PWY-5532|MetaCyc: PWY-5723 CDA09_11565 522087da99c300c8d84e8e31415a6a77 488 Hamap MF_01338 Ribulose bisphosphate carboxylase large chain [rbcL]. 13 479 55.99 T 01-11-2018 IPR020888 Ribulose bisphosphate carboxylase large subunit, type I GO:0000287|GO:0015977|GO:0016984 KEGG: 00630+4.1.1.39|KEGG: 00710+4.1.1.39|MetaCyc: PWY-5532|MetaCyc: PWY-5723 CDA09_11565 522087da99c300c8d84e8e31415a6a77 488 SUPERFAMILY SSF54966 14 153 1.96E-58 T 01-11-2018 IPR036422 RuBisCO large subunit, N-terminal domain superfamily GO:0015977|GO:0016984 KEGG: 00630+4.1.1.39|KEGG: 00710+4.1.1.39|MetaCyc: PWY-5532|MetaCyc: PWY-5723 CDA09_11565 522087da99c300c8d84e8e31415a6a77 488 Gene3D G3DSA:3.20.20.110 155 484 8.2E-138 T 01-11-2018 IPR036376 Ribulose bisphosphate carboxylase, large subunit, C-terminal domain superfamily GO:0000287 KEGG: 00630+4.1.1.39|KEGG: 00710+4.1.1.39|MetaCyc: PWY-5532|MetaCyc: PWY-5723 CDA09_11565 522087da99c300c8d84e8e31415a6a77 488 Pfam PF00016 Ribulose bisphosphate carboxylase large chain, catalytic domain 159 466 1.4E-133 T 01-11-2018 IPR000685 Ribulose bisphosphate carboxylase, large subunit, C-terminal GO:0000287 KEGG: 00630+4.1.1.39|KEGG: 00710+4.1.1.39|MetaCyc: PWY-5532|MetaCyc: PWY-5723 CDA09_11565 522087da99c300c8d84e8e31415a6a77 488 ProSitePatterns PS00157 Ribulose bisphosphate carboxylase large chain active site. 201 209 - T 01-11-2018 IPR020878 Ribulose bisphosphate carboxylase, large chain, active site GO:0000287|GO:0015977|GO:0016984 KEGG: 00630+4.1.1.39|KEGG: 00710+4.1.1.39|MetaCyc: PWY-5532|MetaCyc: PWY-5723 CDA09_11565 522087da99c300c8d84e8e31415a6a77 488 SUPERFAMILY SSF51649 155 481 1.96E-144 T 01-11-2018 IPR036376 Ribulose bisphosphate carboxylase, large subunit, C-terminal domain superfamily GO:0000287 KEGG: 00630+4.1.1.39|KEGG: 00710+4.1.1.39|MetaCyc: PWY-5532|MetaCyc: PWY-5723 CDA09_11565 522087da99c300c8d84e8e31415a6a77 488 Gene3D G3DSA:3.30.70.150 27 153 8.9E-50 T 01-11-2018 IPR036422 RuBisCO large subunit, N-terminal domain superfamily GO:0015977|GO:0016984 KEGG: 00630+4.1.1.39|KEGG: 00710+4.1.1.39|MetaCyc: PWY-5532|MetaCyc: PWY-5723 CDA09_11720 cb5a41e8f6ae4f803cf4322f1e282e77 234 SUPERFAMILY SSF142823 8 221 1.26E-39 T 01-11-2018 IPR036702 ComB-like superfamily GO:0000287|GO:0050532 KEGG: 00680+3.1.3.71 CDA09_11720 cb5a41e8f6ae4f803cf4322f1e282e77 234 Pfam PF04029 2-phosphosulpholactate phosphatase 19 184 2.4E-31 T 01-11-2018 IPR005238 ComB-like GO:0000287|GO:0050532 KEGG: 00680+3.1.3.71 CDA09_11720 cb5a41e8f6ae4f803cf4322f1e282e77 234 Gene3D G3DSA:3.90.1560.10 6 228 3.0E-37 T 01-11-2018 IPR036702 ComB-like superfamily GO:0000287|GO:0050532 KEGG: 00680+3.1.3.71 CDA09_16460 95578bb13c7aea23282ff96434b7f58f 212 Gene3D G3DSA:3.20.19.10 1 184 3.7E-74 T 01-11-2018 IPR015928 Aconitase/3-isopropylmalate dehydratase, swivel KEGG: 00290+4.2.1.33 CDA09_16460 95578bb13c7aea23282ff96434b7f58f 212 Hamap MF_01031 3-isopropylmalate dehydratase small subunit [leuD]. 1 210 42.638 T 01-11-2018 IPR004431 3-isopropylmalate dehydratase, small subunit GO:0003861|GO:0009098|GO:0009316 KEGG: 00290+4.2.1.33 CDA09_16460 95578bb13c7aea23282ff96434b7f58f 212 TIGRFAM TIGR00171 leuD: 3-isopropylmalate dehydratase, small subunit 1 196 3.9E-82 T 01-11-2018 IPR004431 3-isopropylmalate dehydratase, small subunit GO:0003861|GO:0009098|GO:0009316 KEGG: 00290+4.2.1.33 CDA09_16460 95578bb13c7aea23282ff96434b7f58f 212 SUPERFAMILY SSF52016 1 204 1.96E-60 T 01-11-2018 CDA09_16460 95578bb13c7aea23282ff96434b7f58f 212 Pfam PF00694 Aconitase C-terminal domain 1 131 8.7E-34 T 01-11-2018 IPR000573 Aconitase A/isopropylmalate dehydratase small subunit, swivel domain KEGG: 00290+4.2.1.33 CDA09_22755 121237941b478756297ecbbee29642bc 314 SMART SM00283 89 314 7.8E-18 T 01-11-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 CDA09_22755 121237941b478756297ecbbee29642bc 314 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 153 311 1.1E-32 T 01-11-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 CDA09_22755 121237941b478756297ecbbee29642bc 314 Gene3D G3DSA:1.10.287.950 57 314 2.7E-43 T 01-11-2018 CDA09_22755 121237941b478756297ecbbee29642bc 314 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 110 139 1.6E-18 T 01-11-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 CDA09_22755 121237941b478756297ecbbee29642bc 314 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 216 245 1.6E-18 T 01-11-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 CDA09_22755 121237941b478756297ecbbee29642bc 314 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 187 214 1.6E-18 T 01-11-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 CDA09_22755 121237941b478756297ecbbee29642bc 314 SUPERFAMILY SSF58104 95 311 8.5E-44 T 01-11-2018 CDA09_05970 e1efa0de6f57e743a6c22fb27691f952 418 Hamap MF_01978 Pyrophosphate--fructose 6-phosphate 1-phosphotransferase [pfp]. 3 398 41.334 T 01-11-2018 IPR011404 Pyrophosphate--fructose 6-phosphate 1-phosphotransferase, XF0274 GO:0006096|GO:0047334 KEGG: 00010+2.7.1.90|KEGG: 00030+2.7.1.90|KEGG: 00051+2.7.1.90|MetaCyc: PWY-1042 CDA09_05970 e1efa0de6f57e743a6c22fb27691f952 418 PRINTS PR00476 ATP-dependent phosphofructokinase family signature 179 195 1.4E-16 T 01-11-2018 IPR022953 ATP-dependent 6-phosphofructokinase GO:0003872|GO:0006002|GO:0006096 KEGG: 00010+2.7.1.11|KEGG: 00030+2.7.1.11|KEGG: 00051+2.7.1.11|KEGG: 00052+2.7.1.11|KEGG: 00680+2.7.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-7385|Reactome: R-HSA-70171 CDA09_05970 e1efa0de6f57e743a6c22fb27691f952 418 PRINTS PR00476 ATP-dependent phosphofructokinase family signature 8 27 1.4E-16 T 01-11-2018 IPR022953 ATP-dependent 6-phosphofructokinase GO:0003872|GO:0006002|GO:0006096 KEGG: 00010+2.7.1.11|KEGG: 00030+2.7.1.11|KEGG: 00051+2.7.1.11|KEGG: 00052+2.7.1.11|KEGG: 00680+2.7.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-7385|Reactome: R-HSA-70171 CDA09_05970 e1efa0de6f57e743a6c22fb27691f952 418 PRINTS PR00476 ATP-dependent phosphofructokinase family signature 257 279 1.4E-16 T 01-11-2018 IPR022953 ATP-dependent 6-phosphofructokinase GO:0003872|GO:0006002|GO:0006096 KEGG: 00010+2.7.1.11|KEGG: 00030+2.7.1.11|KEGG: 00051+2.7.1.11|KEGG: 00052+2.7.1.11|KEGG: 00680+2.7.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-7385|Reactome: R-HSA-70171 CDA09_05970 e1efa0de6f57e743a6c22fb27691f952 418 PRINTS PR00476 ATP-dependent phosphofructokinase family signature 137 154 1.4E-16 T 01-11-2018 IPR022953 ATP-dependent 6-phosphofructokinase GO:0003872|GO:0006002|GO:0006096 KEGG: 00010+2.7.1.11|KEGG: 00030+2.7.1.11|KEGG: 00051+2.7.1.11|KEGG: 00052+2.7.1.11|KEGG: 00680+2.7.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-7385|Reactome: R-HSA-70171 CDA09_05970 e1efa0de6f57e743a6c22fb27691f952 418 PRINTS PR00476 ATP-dependent phosphofructokinase family signature 104 120 1.4E-16 T 01-11-2018 IPR022953 ATP-dependent 6-phosphofructokinase GO:0003872|GO:0006002|GO:0006096 KEGG: 00010+2.7.1.11|KEGG: 00030+2.7.1.11|KEGG: 00051+2.7.1.11|KEGG: 00052+2.7.1.11|KEGG: 00680+2.7.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-7385|Reactome: R-HSA-70171 CDA09_05970 e1efa0de6f57e743a6c22fb27691f952 418 Gene3D G3DSA:3.40.50.450 5 399 7.4E-133 T 01-11-2018 CDA09_05970 e1efa0de6f57e743a6c22fb27691f952 418 Gene3D G3DSA:3.40.50.460 142 386 7.4E-133 T 01-11-2018 CDA09_05970 e1efa0de6f57e743a6c22fb27691f952 418 Pfam PF00365 Phosphofructokinase 10 323 1.3E-48 T 01-11-2018 IPR000023 Phosphofructokinase domain GO:0003872|GO:0006096 KEGG: 00010+2.7.1.11|KEGG: 00030+2.7.1.11|KEGG: 00051+2.7.1.11|KEGG: 00052+2.7.1.11|KEGG: 00680+2.7.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-7385|Reactome: R-HSA-70171 CDA09_05970 e1efa0de6f57e743a6c22fb27691f952 418 SUPERFAMILY SSF53784 4 408 2.09E-100 T 01-11-2018 IPR035966 Phosphofructokinase superfamily GO:0003872|GO:0006096 KEGG: 00010+2.7.1.11|KEGG: 00030+2.7.1.11|KEGG: 00051+2.7.1.11|KEGG: 00052+2.7.1.11|KEGG: 00680+2.7.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-7385|Reactome: R-HSA-70171 CDA09_05970 e1efa0de6f57e743a6c22fb27691f952 418 PIRSF PIRSF036483 2 417 4.3E-159 T 01-11-2018 IPR011404 Pyrophosphate--fructose 6-phosphate 1-phosphotransferase, XF0274 GO:0006096|GO:0047334 KEGG: 00010+2.7.1.90|KEGG: 00030+2.7.1.90|KEGG: 00051+2.7.1.90|MetaCyc: PWY-1042 CDA09_03325 18930d2d0148fc2ae3c3bf26c96961a8 939 Pfam PF08264 Anticodon-binding domain of tRNA 698 852 1.8E-28 T 01-11-2018 IPR013155 Methionyl/Valyl/Leucyl/Isoleucyl-tRNA synthetase, anticodon-binding GO:0004812|GO:0006418 CDA09_03325 18930d2d0148fc2ae3c3bf26c96961a8 939 SUPERFAMILY SSF52374 3 661 3.15E-138 T 01-11-2018 CDA09_03325 18930d2d0148fc2ae3c3bf26c96961a8 939 Gene3D G3DSA:1.10.730.20 653 930 2.0E-88 T 01-11-2018 CDA09_03325 18930d2d0148fc2ae3c3bf26c96961a8 939 SUPERFAMILY SSF47323 665 929 1.59E-74 T 01-11-2018 IPR009080 Aminoacyl-tRNA synthetase, class Ia, anticodon-binding GO:0000166|GO:0004812|GO:0005524|GO:0006418 CDA09_03325 18930d2d0148fc2ae3c3bf26c96961a8 939 ProSitePatterns PS00178 Aminoacyl-transfer RNA synthetases class-I signature. 58 69 - T 01-11-2018 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site GO:0000166|GO:0004812|GO:0005524|GO:0006418 CDA09_03325 18930d2d0148fc2ae3c3bf26c96961a8 939 Pfam PF00133 tRNA synthetases class I (I, L, M and V) 28 653 2.0E-194 T 01-11-2018 IPR002300 Aminoacyl-tRNA synthetase, class Ia GO:0000166|GO:0004812|GO:0005524|GO:0006418 CDA09_03325 18930d2d0148fc2ae3c3bf26c96961a8 939 Gene3D G3DSA:3.90.740.10 192 409 1.1E-223 T 01-11-2018 IPR009008 Valyl/Leucyl/Isoleucyl-tRNA synthetase, editing domain GO:0002161|GO:0006418 CDA09_03325 18930d2d0148fc2ae3c3bf26c96961a8 939 SUPERFAMILY SSF50677 201 404 3.87E-50 T 01-11-2018 IPR009008 Valyl/Leucyl/Isoleucyl-tRNA synthetase, editing domain GO:0002161|GO:0006418 CDA09_03325 18930d2d0148fc2ae3c3bf26c96961a8 939 Pfam PF06827 Zinc finger found in FPG and IleRS 901 925 9.0E-6 T 01-11-2018 IPR010663 Zinc finger, FPG/IleRS-type Reactome: R-HSA-379726 CDA09_03325 18930d2d0148fc2ae3c3bf26c96961a8 939 PRINTS PR00984 Isoleucyl-tRNA synthetase signature 402 417 1.4E-31 T 01-11-2018 IPR002301 Isoleucine-tRNA ligase GO:0000166|GO:0004822|GO:0005524|GO:0005737|GO:0006428 KEGG: 00970+6.1.1.5 CDA09_03325 18930d2d0148fc2ae3c3bf26c96961a8 939 PRINTS PR00984 Isoleucyl-tRNA synthetase signature 51 62 1.4E-31 T 01-11-2018 IPR002301 Isoleucine-tRNA ligase GO:0000166|GO:0004822|GO:0005524|GO:0005737|GO:0006428 KEGG: 00970+6.1.1.5 CDA09_03325 18930d2d0148fc2ae3c3bf26c96961a8 939 PRINTS PR00984 Isoleucyl-tRNA synthetase signature 238 261 1.4E-31 T 01-11-2018 IPR002301 Isoleucine-tRNA ligase GO:0000166|GO:0004822|GO:0005524|GO:0005737|GO:0006428 KEGG: 00970+6.1.1.5 CDA09_03325 18930d2d0148fc2ae3c3bf26c96961a8 939 PRINTS PR00984 Isoleucyl-tRNA synthetase signature 574 583 1.4E-31 T 01-11-2018 IPR002301 Isoleucine-tRNA ligase GO:0000166|GO:0004822|GO:0005524|GO:0005737|GO:0006428 KEGG: 00970+6.1.1.5 CDA09_03325 18930d2d0148fc2ae3c3bf26c96961a8 939 PRINTS PR00984 Isoleucyl-tRNA synthetase signature 538 551 1.4E-31 T 01-11-2018 IPR002301 Isoleucine-tRNA ligase GO:0000166|GO:0004822|GO:0005524|GO:0005737|GO:0006428 KEGG: 00970+6.1.1.5 CDA09_03325 18930d2d0148fc2ae3c3bf26c96961a8 939 Gene3D G3DSA:3.40.50.620 25 642 1.1E-223 T 01-11-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold CDA09_03325 18930d2d0148fc2ae3c3bf26c96961a8 939 Hamap MF_02002 Isoleucine--tRNA ligase [ileS]. 2 930 20.983 T 01-11-2018 IPR023585 Isoleucine-tRNA ligase, type 1 GO:0004822 KEGG: 00970+6.1.1.5|Reactome: R-HSA-379726 CDA09_03325 18930d2d0148fc2ae3c3bf26c96961a8 939 TIGRFAM TIGR00392 ileS: isoleucine--tRNA ligase 15 853 6.9E-265 T 01-11-2018 IPR002301 Isoleucine-tRNA ligase GO:0000166|GO:0004822|GO:0005524|GO:0005737|GO:0006428 KEGG: 00970+6.1.1.5 CDA09_13210 1b18fbda6c400ecb92a0f1b1c5c7477e 597 Gene3D G3DSA:3.50.50.60 9 415 3.0E-166 T 01-11-2018 IPR036188 FAD/NAD(P)-binding domain superfamily CDA09_13210 1b18fbda6c400ecb92a0f1b1c5c7477e 597 TIGRFAM TIGR01812 sdhA_frdA_Gneg: succinate dehydrogenase or fumarate reductase, flavoprotein subunit 9 597 1.2E-235 T 01-11-2018 IPR014006 Succinate dehydrogenase/fumarate reductase, flavoprotein subunit GO:0016627|GO:0022900|GO:0050660|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-71403 CDA09_13210 1b18fbda6c400ecb92a0f1b1c5c7477e 597 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 9 31 2.6E-5 T 01-11-2018 CDA09_13210 1b18fbda6c400ecb92a0f1b1c5c7477e 597 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 382 389 2.6E-5 T 01-11-2018 CDA09_13210 1b18fbda6c400ecb92a0f1b1c5c7477e 597 SUPERFAMILY SSF51905 6 435 1.88E-78 T 01-11-2018 IPR036188 FAD/NAD(P)-binding domain superfamily CDA09_13210 1b18fbda6c400ecb92a0f1b1c5c7477e 597 Gene3D G3DSA:3.90.700.10 246 349 3.0E-166 T 01-11-2018 IPR027477 Succinate dehydrogenase/fumarate reductase flavoprotein, catalytic domain superfamily Reactome: R-HSA-611105|Reactome: R-HSA-71403 CDA09_13210 1b18fbda6c400ecb92a0f1b1c5c7477e 597 PIRSF PIRSF000171 1 584 6.6E-42 T 01-11-2018 CDA09_13210 1b18fbda6c400ecb92a0f1b1c5c7477e 597 Gene3D G3DSA:1.20.58.100 434 547 3.7E-34 T 01-11-2018 CDA09_13210 1b18fbda6c400ecb92a0f1b1c5c7477e 597 Pfam PF02910 Fumarate reductase flavoprotein C-term 462 597 9.1E-37 T 01-11-2018 IPR015939 Fumarate reductase/succinate dehydrogenase flavoprotein-like, C-terminal GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-71403 CDA09_13210 1b18fbda6c400ecb92a0f1b1c5c7477e 597 ProSitePatterns PS00504 Fumarate reductase / succinate dehydrogenase FAD-binding site. 43 52 - T 01-11-2018 IPR003952 Fumarate reductase/succinate dehydrogenase, FAD-binding site GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-71403 CDA09_13210 1b18fbda6c400ecb92a0f1b1c5c7477e 597 Pfam PF00890 FAD binding domain 9 404 4.8E-121 T 01-11-2018 IPR003953 FAD-dependent oxidoreductase 2, FAD binding domain Reactome: R-HSA-611105|Reactome: R-HSA-71403 CDA09_13210 1b18fbda6c400ecb92a0f1b1c5c7477e 597 TIGRFAM TIGR01816 sdhA_forward: succinate dehydrogenase, flavoprotein subunit 7 589 1.5E-282 T 01-11-2018 IPR011281 Succinate dehydrogenase, flavoprotein subunit GO:0006099|GO:0016627|GO:0050660|GO:0055114 KEGG: 00020+1.3.5.1|KEGG: 00190+1.3.5.1|KEGG: 00650+1.3.5.1|KEGG: 00720+1.3.5.1|MetaCyc: PWY-3781|MetaCyc: PWY-4302|MetaCyc: PWY-561|MetaCyc: PWY-5690|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7254|MetaCyc: PWY-7279|Reactome: R-HSA-611105|Reactome: R-HSA-71403 CDA09_13210 1b18fbda6c400ecb92a0f1b1c5c7477e 597 SUPERFAMILY SSF46977 452 597 1.83E-39 T 01-11-2018 IPR037099 Fumarate reductase/succinate dehydrogenase flavoprotein-like, C-terminal domain superfamily GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-71403 CDA09_13210 1b18fbda6c400ecb92a0f1b1c5c7477e 597 SUPERFAMILY SSF56425 236 354 4.19E-44 T 01-11-2018 IPR027477 Succinate dehydrogenase/fumarate reductase flavoprotein, catalytic domain superfamily Reactome: R-HSA-611105|Reactome: R-HSA-71403 CDA09_13135 61b9193459927659a6c6492841689fd4 859 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 677 695 1.2E-42 T 01-11-2018 IPR001270 ClpA/B family GO:0005524 CDA09_13135 61b9193459927659a6c6492841689fd4 859 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 710 724 1.2E-42 T 01-11-2018 IPR001270 ClpA/B family GO:0005524 CDA09_13135 61b9193459927659a6c6492841689fd4 859 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 603 621 1.2E-42 T 01-11-2018 IPR001270 ClpA/B family GO:0005524 CDA09_13135 61b9193459927659a6c6492841689fd4 859 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 648 666 1.2E-42 T 01-11-2018 IPR001270 ClpA/B family GO:0005524 CDA09_13135 61b9193459927659a6c6492841689fd4 859 ProSitePatterns PS00870 Chaperonins clpA/B signature 1. 294 306 - T 01-11-2018 IPR018368 ClpA/B, conserved site 1 GO:0005524 CDA09_13135 61b9193459927659a6c6492841689fd4 859 SMART SM00382 198 343 6.2E-13 T 01-11-2018 IPR003593 AAA+ ATPase domain CDA09_13135 61b9193459927659a6c6492841689fd4 859 SMART SM00382 599 759 3.0E-10 T 01-11-2018 IPR003593 AAA+ ATPase domain CDA09_13135 61b9193459927659a6c6492841689fd4 859 SUPERFAMILY SSF52540 548 852 1.74E-82 T 01-11-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CDA09_13135 61b9193459927659a6c6492841689fd4 859 Pfam PF10431 C-terminal, D2-small domain, of ClpB protein 767 847 6.2E-25 T 01-11-2018 IPR019489 Clp ATPase, C-terminal CDA09_13135 61b9193459927659a6c6492841689fd4 859 ProSitePatterns PS00871 Chaperonins clpA/B signature 2. 633 651 - T 01-11-2018 IPR028299 ClpA/B, conserved site 2 CDA09_13135 61b9193459927659a6c6492841689fd4 859 Pfam PF07724 AAA domain (Cdc48 subfamily) 598 761 7.7E-56 T 01-11-2018 IPR003959 ATPase, AAA-type, core GO:0005524 CDA09_13135 61b9193459927659a6c6492841689fd4 859 SMART SM01086 767 856 2.9E-37 T 01-11-2018 IPR019489 Clp ATPase, C-terminal CDA09_13135 61b9193459927659a6c6492841689fd4 859 Gene3D G3DSA:1.10.8.60 767 859 1.8E-27 T 01-11-2018 CDA09_13135 61b9193459927659a6c6492841689fd4 859 SUPERFAMILY SSF52540 160 547 1.13E-100 T 01-11-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CDA09_13135 61b9193459927659a6c6492841689fd4 859 Pfam PF00004 ATPase family associated with various cellular activities (AAA) 203 335 2.2E-14 T 01-11-2018 IPR003959 ATPase, AAA-type, core GO:0005524 CDA09_13135 61b9193459927659a6c6492841689fd4 859 SUPERFAMILY SSF81923 4 156 2.65E-42 T 01-11-2018 IPR036628 Clp, N-terminal domain superfamily GO:0019538 CDA09_13135 61b9193459927659a6c6492841689fd4 859 Gene3D G3DSA:3.40.50.300 552 765 8.5E-88 T 01-11-2018 CDA09_13135 61b9193459927659a6c6492841689fd4 859 Pfam PF02861 Clp amino terminal domain, pathogenicity island component 17 68 4.5E-11 T 01-11-2018 IPR004176 Clp, N-terminal CDA09_13135 61b9193459927659a6c6492841689fd4 859 Pfam PF02861 Clp amino terminal domain, pathogenicity island component 94 145 2.2E-12 T 01-11-2018 IPR004176 Clp, N-terminal CDA09_13135 61b9193459927659a6c6492841689fd4 859 TIGRFAM TIGR03346 chaperone_ClpB: ATP-dependent chaperone protein ClpB 6 856 0.0 T 01-11-2018 IPR017730 Chaperonin ClpB GO:0005737|GO:0009408|GO:0042026 CDA09_13135 61b9193459927659a6c6492841689fd4 859 Gene3D G3DSA:1.10.1780.10 1 147 5.3E-32 T 01-11-2018 IPR036628 Clp, N-terminal domain superfamily GO:0019538 CDA09_13135 61b9193459927659a6c6492841689fd4 859 Gene3D G3DSA:3.40.50.300 148 342 1.4E-75 T 01-11-2018 CDA09_13135 61b9193459927659a6c6492841689fd4 859 Gene3D G3DSA:3.40.50.300 343 546 2.4E-68 T 01-11-2018 CDA09_13080 de336a84994748967f8c31740fbdafe7 486 SMART SM01240 6 472 0.0 T 01-11-2018 CDA09_13080 de336a84994748967f8c31740fbdafe7 486 Pfam PF00571 CBS domain 94 138 6.4E-10 T 01-11-2018 IPR000644 CBS domain CDA09_13080 de336a84994748967f8c31740fbdafe7 486 Pfam PF00571 CBS domain 147 201 2.9E-9 T 01-11-2018 IPR000644 CBS domain CDA09_13080 de336a84994748967f8c31740fbdafe7 486 TIGRFAM TIGR01302 IMP_dehydrog: inosine-5'-monophosphate dehydrogenase 7 454 4.7E-190 T 01-11-2018 IPR005990 Inosine-5'-monophosphate dehydrogenase GO:0003938|GO:0006164|GO:0055114 KEGG: 00230+1.1.1.205|KEGG: 00983+1.1.1.205|MetaCyc: PWY-5695|MetaCyc: PWY-6596|MetaCyc: PWY-7221|Reactome: R-HSA-6798695|Reactome: R-HSA-73817 CDA09_13080 de336a84994748967f8c31740fbdafe7 486 Pfam PF00478 IMP dehydrogenase / GMP reductase domain 7 472 2.0E-163 T 01-11-2018 IPR001093 IMP dehydrogenase/GMP reductase GO:0003824|GO:0055114 CDA09_13080 de336a84994748967f8c31740fbdafe7 486 SMART SM00116 95 142 2.6E-10 T 01-11-2018 IPR000644 CBS domain CDA09_13080 de336a84994748967f8c31740fbdafe7 486 SMART SM00116 156 204 1.1E-7 T 01-11-2018 IPR000644 CBS domain CDA09_13080 de336a84994748967f8c31740fbdafe7 486 Hamap MF_01964 Inosine-5'-monophosphate dehydrogenase [guaB]. 7 485 85.481 T 01-11-2018 IPR005990 Inosine-5'-monophosphate dehydrogenase GO:0003938|GO:0006164|GO:0055114 KEGG: 00230+1.1.1.205|KEGG: 00983+1.1.1.205|MetaCyc: PWY-5695|MetaCyc: PWY-6596|MetaCyc: PWY-7221|Reactome: R-HSA-6798695|Reactome: R-HSA-73817 CDA09_13080 de336a84994748967f8c31740fbdafe7 486 PIRSF PIRSF000130 1 486 6.1E-204 T 01-11-2018 IPR005990 Inosine-5'-monophosphate dehydrogenase GO:0003938|GO:0006164|GO:0055114 KEGG: 00230+1.1.1.205|KEGG: 00983+1.1.1.205|MetaCyc: PWY-5695|MetaCyc: PWY-6596|MetaCyc: PWY-7221|Reactome: R-HSA-6798695|Reactome: R-HSA-73817 CDA09_13080 de336a84994748967f8c31740fbdafe7 486 Gene3D G3DSA:3.20.20.70 1 485 6.7E-215 T 01-11-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 CDA09_13080 de336a84994748967f8c31740fbdafe7 486 ProSitePatterns PS00487 IMP dehydrogenase / GMP reductase signature. 293 305 - T 01-11-2018 IPR015875 IMP dehydrogenase / GMP reductase, conserved site GO:0016491|GO:0055114 CDA09_13080 de336a84994748967f8c31740fbdafe7 486 SUPERFAMILY SSF51412 2 476 2.09E-124 T 01-11-2018 CDA09_13080 de336a84994748967f8c31740fbdafe7 486 SUPERFAMILY SSF54631 94 201 1.59E-29 T 01-11-2018 CDA09_22480 1520f6328aa72aa1a42d55e2172ab1a9 199 Gene3D G3DSA:2.40.128.20 26 199 1.8E-46 T 01-11-2018 IPR012674 Calycin CDA09_22480 1520f6328aa72aa1a42d55e2172ab1a9 199 SUPERFAMILY SSF50814 26 198 6.23E-38 T 01-11-2018 IPR012674 Calycin CDA09_22480 1520f6328aa72aa1a42d55e2172ab1a9 199 PRINTS PR01171 Bacterial lipocalin signature 159 170 6.0E-11 T 01-11-2018 IPR002446 Lipocalin, bacterial GO:0005215 CDA09_22480 1520f6328aa72aa1a42d55e2172ab1a9 199 PRINTS PR01171 Bacterial lipocalin signature 50 64 6.0E-11 T 01-11-2018 IPR002446 Lipocalin, bacterial GO:0005215 CDA09_22480 1520f6328aa72aa1a42d55e2172ab1a9 199 PRINTS PR01171 Bacterial lipocalin signature 186 196 6.0E-11 T 01-11-2018 IPR002446 Lipocalin, bacterial GO:0005215 CDA09_22480 1520f6328aa72aa1a42d55e2172ab1a9 199 PRINTS PR01171 Bacterial lipocalin signature 144 152 6.0E-11 T 01-11-2018 IPR002446 Lipocalin, bacterial GO:0005215 CDA09_22480 1520f6328aa72aa1a42d55e2172ab1a9 199 Pfam PF08212 Lipocalin-like domain 50 197 2.6E-46 T 01-11-2018 IPR000566 Lipocalin/cytosolic fatty-acid binding domain CDA09_22480 1520f6328aa72aa1a42d55e2172ab1a9 199 PIRSF PIRSF036893 14 199 2.4E-50 T 01-11-2018 IPR022271 Lipocalin, ApoD type CDA09_15900 0aa2d8efd2d708fcbd6eddcbd9484b02 287 PIRSF PIRSF000846 1 287 3.6E-84 T 01-11-2018 IPR009163 ATP adenylyltransferase GO:0003877|GO:0005524|GO:0009117 KEGG: 00230+2.7.7.53|KEGG: 00920+2.7.7.5|MetaCyc: PWY-5279 CDA09_15900 0aa2d8efd2d708fcbd6eddcbd9484b02 287 SUPERFAMILY SSF54197 34 152 1.7E-18 T 01-11-2018 IPR036265 HIT-like superfamily CDA09_15900 0aa2d8efd2d708fcbd6eddcbd9484b02 287 Gene3D G3DSA:3.30.428.70 1 287 2.4E-69 T 01-11-2018 CDA09_15900 0aa2d8efd2d708fcbd6eddcbd9484b02 287 Pfam PF09830 ATP adenylyltransferase 226 284 8.2E-19 T 01-11-2018 IPR019200 ATP adenylyltransferase, C-terminal GO:0003877 KEGG: 00230+2.7.7.53|KEGG: 00920+2.7.7.5|MetaCyc: PWY-5279 CDA09_01630 83fc9f9807cb6b575fbe70b814427713 487 Pfam PF01739 CheR methyltransferase, SAM binding domain 94 271 4.9E-48 T 01-11-2018 IPR022642 MCP methyltransferase, CheR-type, SAM-binding domain, C-terminal CDA09_01630 83fc9f9807cb6b575fbe70b814427713 487 SUPERFAMILY SSF53335 93 279 8.72E-44 T 01-11-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase CDA09_01630 83fc9f9807cb6b575fbe70b814427713 487 SUPERFAMILY SSF48452 344 448 1.46E-11 T 01-11-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 CDA09_01630 83fc9f9807cb6b575fbe70b814427713 487 SMART SM00138 27 292 1.6E-51 T 01-11-2018 IPR000780 MCP methyltransferase, CheR-type GO:0008757 CDA09_01630 83fc9f9807cb6b575fbe70b814427713 487 Gene3D G3DSA:3.40.50.150 92 291 2.0E-53 T 01-11-2018 CDA09_01630 83fc9f9807cb6b575fbe70b814427713 487 Gene3D G3DSA:1.25.40.10 327 460 6.6E-13 T 01-11-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 CDA09_01630 83fc9f9807cb6b575fbe70b814427713 487 PRINTS PR00996 Glutamate methyltransferase family signature 161 177 8.9E-26 T 01-11-2018 IPR000780 MCP methyltransferase, CheR-type GO:0008757 CDA09_01630 83fc9f9807cb6b575fbe70b814427713 487 PRINTS PR00996 Glutamate methyltransferase family signature 126 146 8.9E-26 T 01-11-2018 IPR000780 MCP methyltransferase, CheR-type GO:0008757 CDA09_01630 83fc9f9807cb6b575fbe70b814427713 487 PRINTS PR00996 Glutamate methyltransferase family signature 86 98 8.9E-26 T 01-11-2018 IPR000780 MCP methyltransferase, CheR-type GO:0008757 CDA09_01630 83fc9f9807cb6b575fbe70b814427713 487 PRINTS PR00996 Glutamate methyltransferase family signature 229 243 8.9E-26 T 01-11-2018 IPR000780 MCP methyltransferase, CheR-type GO:0008757 CDA09_01630 83fc9f9807cb6b575fbe70b814427713 487 PRINTS PR00996 Glutamate methyltransferase family signature 248 271 8.9E-26 T 01-11-2018 IPR000780 MCP methyltransferase, CheR-type GO:0008757 CDA09_08235 32bc5a3013cdbf93fa575f02f2416bef 175 Gene3D G3DSA:2.40.320.10 1 151 9.3E-40 T 01-11-2018 CDA09_08235 32bc5a3013cdbf93fa575f02f2416bef 175 PIRSF PIRSF016487 1 154 8.5E-46 T 01-11-2018 IPR012042 Inorganic triphosphatase NeuTTM/CthTTM-like CDA09_08235 32bc5a3013cdbf93fa575f02f2416bef 175 SUPERFAMILY SSF55154 1 149 3.92E-33 T 01-11-2018 IPR033469 CYTH-like domain superfamily Reactome: R-HSA-196819 CDA09_08235 32bc5a3013cdbf93fa575f02f2416bef 175 Pfam PF01928 CYTH domain 39 145 1.3E-6 T 01-11-2018 IPR023577 CYTH domain Reactome: R-HSA-196819 CDA09_08235 32bc5a3013cdbf93fa575f02f2416bef 175 SMART SM01118 2 149 5.8E-11 T 01-11-2018 IPR023577 CYTH domain Reactome: R-HSA-196819 CDA09_02195 79aa8ad436045192bc76c4fead8cae10 695 TIGRFAM TIGR01494 ATPase_P-type: HAD ATPase, P-type, family IC 169 673 2.0E-68 T 01-11-2018 IPR001757 P-type ATPase GO:0016021 Reactome: R-HSA-936837 CDA09_02195 79aa8ad436045192bc76c4fead8cae10 695 Pfam PF00702 haloacid dehalogenase-like hydrolase 385 603 8.8E-31 T 01-11-2018 CDA09_02195 79aa8ad436045192bc76c4fead8cae10 695 SUPERFAMILY SSF56784 386 690 1.01E-42 T 01-11-2018 IPR036412 HAD-like superfamily CDA09_02195 79aa8ad436045192bc76c4fead8cae10 695 Gene3D G3DSA:3.40.1110.10 399 521 1.5E-76 T 01-11-2018 IPR023299 P-type ATPase, cytoplasmic domain N GO:0000166 Reactome: R-HSA-936837 CDA09_02195 79aa8ad436045192bc76c4fead8cae10 695 PRINTS PR00120 H+-transporting ATPase (proton pump) signature 562 578 3.6E-7 T 01-11-2018 IPR001757 P-type ATPase GO:0016021 Reactome: R-HSA-936837 CDA09_02195 79aa8ad436045192bc76c4fead8cae10 695 PRINTS PR00120 H+-transporting ATPase (proton pump) signature 590 606 3.6E-7 T 01-11-2018 IPR001757 P-type ATPase GO:0016021 Reactome: R-HSA-936837 CDA09_02195 79aa8ad436045192bc76c4fead8cae10 695 PRINTS PR00120 H+-transporting ATPase (proton pump) signature 621 646 3.6E-7 T 01-11-2018 IPR001757 P-type ATPase GO:0016021 Reactome: R-HSA-936837 CDA09_02195 79aa8ad436045192bc76c4fead8cae10 695 ProSitePatterns PS01229 Hypothetical cof family signature 2. 590 612 - T 01-11-2018 CDA09_02195 79aa8ad436045192bc76c4fead8cae10 695 Pfam PF00122 E1-E2 ATPase 199 365 3.1E-34 T 01-11-2018 CDA09_02195 79aa8ad436045192bc76c4fead8cae10 695 SUPERFAMILY SSF81653 200 296 4.05E-24 T 01-11-2018 IPR008250 P-type ATPase, A domain superfamily Reactome: R-HSA-936837 CDA09_02195 79aa8ad436045192bc76c4fead8cae10 695 SUPERFAMILY SSF55008 36 80 3.32E-5 T 01-11-2018 IPR036163 Heavy metal-associated domain superfamily GO:0030001|GO:0046872 CDA09_02195 79aa8ad436045192bc76c4fead8cae10 695 TIGRFAM TIGR01525 ATPase-IB_hvy: heavy metal translocating P-type ATPase 147 691 2.0E-147 T 01-11-2018 IPR027256 P-type ATPase, subfamily IB GO:0006812|GO:0016021|GO:0019829 Reactome: R-HSA-936837 CDA09_02195 79aa8ad436045192bc76c4fead8cae10 695 Gene3D G3DSA:3.30.70.100 34 80 8.5E-5 T 01-11-2018 CDA09_02195 79aa8ad436045192bc76c4fead8cae10 695 Gene3D G3DSA:2.70.150.20 189 300 2.8E-29 T 01-11-2018 CDA09_02195 79aa8ad436045192bc76c4fead8cae10 695 ProSitePatterns PS00154 E1-E2 ATPases phosphorylation site. 390 396 - T 01-11-2018 IPR018303 P-type ATPase, phosphorylation site Reactome: R-HSA-936837 CDA09_02195 79aa8ad436045192bc76c4fead8cae10 695 Gene3D G3DSA:3.40.50.1000 369 642 1.5E-76 T 01-11-2018 IPR023214 HAD superfamily CDA09_02195 79aa8ad436045192bc76c4fead8cae10 695 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 246 260 3.3E-24 T 01-11-2018 CDA09_02195 79aa8ad436045192bc76c4fead8cae10 695 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 388 402 3.3E-24 T 01-11-2018 CDA09_02195 79aa8ad436045192bc76c4fead8cae10 695 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 613 625 3.3E-24 T 01-11-2018 CDA09_02195 79aa8ad436045192bc76c4fead8cae10 695 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 537 547 3.3E-24 T 01-11-2018 CDA09_02195 79aa8ad436045192bc76c4fead8cae10 695 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 590 609 3.3E-24 T 01-11-2018 CDA09_02195 79aa8ad436045192bc76c4fead8cae10 695 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 514 525 3.3E-24 T 01-11-2018 CDA09_10415 4136029333afb2de43721ab3016363ca 89 Gene3D G3DSA:3.90.56.10 1 89 2.4E-36 T 01-11-2018 IPR036889 Monooxygenase component MmoB/DmpM superfamily GO:0004497|GO:0006725 CDA09_10415 4136029333afb2de43721ab3016363ca 89 ProDom PD004249 MONOOXYGENASE COMPONENT HYDROXYLASE MMOB/DMPM PHENOL SUBUNIT 3D-STRUCTURE HYDROCARBONS IRON PHENOLHYDROXYLASE 8 83 3.0E-29 T 01-11-2018 IPR003454 Monooxygenase component MmoB/DmpM GO:0004497|GO:0006725 CDA09_10415 4136029333afb2de43721ab3016363ca 89 Pfam PF02406 MmoB/DmpM family 3 85 1.9E-32 T 01-11-2018 IPR003454 Monooxygenase component MmoB/DmpM GO:0004497|GO:0006725 CDA09_10415 4136029333afb2de43721ab3016363ca 89 SUPERFAMILY SSF56029 3 88 2.88E-32 T 01-11-2018 IPR036889 Monooxygenase component MmoB/DmpM superfamily GO:0004497|GO:0006725 CDA09_19525 70b322333abd0132063e8b69e4cfddf4 214 TIGRFAM TIGR03625 L3_bact: 50S ribosomal protein uL3 4 207 2.3E-85 T 01-11-2018 IPR019927 Ribosomal protein L3, bacterial/organelle-type GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 CDA09_19525 70b322333abd0132063e8b69e4cfddf4 214 Gene3D G3DSA:2.40.50.620 32 96 2.6E-14 T 01-11-2018 CDA09_19525 70b322333abd0132063e8b69e4cfddf4 214 SUPERFAMILY SSF50447 2 211 2.03E-78 T 01-11-2018 IPR009000 Translation protein, beta-barrel domain superfamily CDA09_19525 70b322333abd0132063e8b69e4cfddf4 214 ProSitePatterns PS00474 Ribosomal protein L3 signature. 104 127 - T 01-11-2018 IPR019926 Ribosomal protein L3, conserved site CDA09_19525 70b322333abd0132063e8b69e4cfddf4 214 Pfam PF00297 Ribosomal protein L3 68 184 5.6E-15 T 01-11-2018 IPR000597 Ribosomal protein L3 GO:0003735|GO:0005622|GO:0005840|GO:0006412 CDA09_19525 70b322333abd0132063e8b69e4cfddf4 214 Gene3D G3DSA:2.40.30.10 133 213 3.4E-14 T 01-11-2018 CDA09_19525 70b322333abd0132063e8b69e4cfddf4 214 Hamap MF_01325_B 50S ribosomal protein L3 [rplC]. 2 210 38.55 T 01-11-2018 IPR019927 Ribosomal protein L3, bacterial/organelle-type GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 CDA09_20290 19b456acc3d4bbc1b2a486f5499a8848 452 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 264 296 2.3E-6 T 01-11-2018 IPR001451 Hexapeptide repeat CDA09_20290 19b456acc3d4bbc1b2a486f5499a8848 452 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 313 347 2.4E-7 T 01-11-2018 IPR001451 Hexapeptide repeat CDA09_20290 19b456acc3d4bbc1b2a486f5499a8848 452 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 391 425 3.3E-7 T 01-11-2018 IPR001451 Hexapeptide repeat CDA09_20290 19b456acc3d4bbc1b2a486f5499a8848 452 Pfam PF12804 MobA-like NTP transferase domain 3 119 2.6E-23 T 01-11-2018 IPR025877 MobA-like NTP transferase CDA09_20290 19b456acc3d4bbc1b2a486f5499a8848 452 Gene3D G3DSA:2.160.10.10 224 452 6.8E-69 T 01-11-2018 CDA09_20290 19b456acc3d4bbc1b2a486f5499a8848 452 SUPERFAMILY SSF53448 1 248 7.93E-65 T 01-11-2018 IPR029044 Nucleotide-diphospho-sugar transferases CDA09_20290 19b456acc3d4bbc1b2a486f5499a8848 452 Hamap MF_01631 Bifunctional protein GlmU [glmU]. 1 448 41.503 T 01-11-2018 IPR005882 Bifunctional UDP-N-acetylglucosamine pyrophosphorylase/glucosamine-1-phosphate N-acetyltransferase GO:0000287|GO:0000902|GO:0003977|GO:0005737|GO:0009103|GO:0009252|GO:0019134 KEGG: 00520+2.3.1.157+2.7.7.23|MetaCyc: PWY-5514 CDA09_20290 19b456acc3d4bbc1b2a486f5499a8848 452 Gene3D G3DSA:3.90.550.10 1 223 5.9E-62 T 01-11-2018 IPR029044 Nucleotide-diphospho-sugar transferases CDA09_20290 19b456acc3d4bbc1b2a486f5499a8848 452 TIGRFAM TIGR01173 glmU: UDP-N-acetylglucosamine diphosphorylase/glucosamine-1-phosphate N-acetyltransferase 1 450 1.1E-188 T 01-11-2018 IPR005882 Bifunctional UDP-N-acetylglucosamine pyrophosphorylase/glucosamine-1-phosphate N-acetyltransferase GO:0000287|GO:0000902|GO:0003977|GO:0005737|GO:0009103|GO:0009252|GO:0019134 KEGG: 00520+2.3.1.157+2.7.7.23|MetaCyc: PWY-5514 CDA09_20290 19b456acc3d4bbc1b2a486f5499a8848 452 SUPERFAMILY SSF51161 250 433 2.54E-51 T 01-11-2018 IPR011004 Trimeric LpxA-like superfamily CDA09_07535 6029a11663dee3fd6690cc95fa6bd5e2 864 Pfam PF01228 Glycine radical 735 834 1.1E-21 T 01-11-2018 IPR001150 Glycine radical domain GO:0003824 CDA09_07535 6029a11663dee3fd6690cc95fa6bd5e2 864 Pfam PF02901 Pyruvate formate lyase-like 44 715 4.5E-181 T 01-11-2018 IPR004184 Pyruvate formate lyase domain GO:0003824 CDA09_07535 6029a11663dee3fd6690cc95fa6bd5e2 864 Gene3D G3DSA:3.20.70.40 53 852 3.1E-223 T 01-11-2018 CDA09_07535 6029a11663dee3fd6690cc95fa6bd5e2 864 ProSitePatterns PS00850 Glycine radical domain signature. 823 831 - T 01-11-2018 IPR019777 Formate C-acetyltransferase glycine radical, conserved site CDA09_07535 6029a11663dee3fd6690cc95fa6bd5e2 864 SUPERFAMILY SSF51998 60 851 1.28E-181 T 01-11-2018 CDA09_10500 0cb5872d8f38e10041d8ac775992585c 358 TIGRFAM TIGR02160 PA_CoA_Oxy5: phenylacetate-CoA oxygenase/reductase, PaaK subunit 4 355 9.9E-139 T 01-11-2018 IPR011884 Phenylacetate-CoA oxygenase/reductase, PaaK subunit GO:0010124 CDA09_10500 0cb5872d8f38e10041d8ac775992585c 358 SUPERFAMILY SSF54292 239 353 6.74E-28 T 01-11-2018 IPR036010 2Fe-2S ferredoxin-like superfamily GO:0009055|GO:0051536 CDA09_10500 0cb5872d8f38e10041d8ac775992585c 358 ProSitePatterns PS00197 2Fe-2S ferredoxin-type iron-sulfur binding region signature. 303 311 - T 01-11-2018 IPR006058 2Fe-2S ferredoxin, iron-sulphur binding site GO:0051537 CDA09_10500 0cb5872d8f38e10041d8ac775992585c 358 SUPERFAMILY SSF63380 2 105 1.42E-26 T 01-11-2018 IPR017938 Riboflavin synthase-like beta-barrel CDA09_10500 0cb5872d8f38e10041d8ac775992585c 358 SUPERFAMILY SSF52343 94 242 4.58E-34 T 01-11-2018 IPR039261 Ferredoxin-NADP reductase (FNR), nucleotide-binding domain CDA09_10500 0cb5872d8f38e10041d8ac775992585c 358 PRINTS PR00371 Flavoprotein pyridine nucleotide cytochrome reductase signature 55 62 9.8E-8 T 01-11-2018 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase GO:0016491|GO:0055114 CDA09_10500 0cb5872d8f38e10041d8ac775992585c 358 PRINTS PR00371 Flavoprotein pyridine nucleotide cytochrome reductase signature 141 150 9.8E-8 T 01-11-2018 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase GO:0016491|GO:0055114 CDA09_10500 0cb5872d8f38e10041d8ac775992585c 358 PRINTS PR00371 Flavoprotein pyridine nucleotide cytochrome reductase signature 153 164 9.8E-8 T 01-11-2018 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase GO:0016491|GO:0055114 CDA09_10500 0cb5872d8f38e10041d8ac775992585c 358 PRINTS PR00371 Flavoprotein pyridine nucleotide cytochrome reductase signature 36 46 9.8E-8 T 01-11-2018 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase GO:0016491|GO:0055114 CDA09_10500 0cb5872d8f38e10041d8ac775992585c 358 PRINTS PR00371 Flavoprotein pyridine nucleotide cytochrome reductase signature 116 135 9.8E-8 T 01-11-2018 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase GO:0016491|GO:0055114 CDA09_10500 0cb5872d8f38e10041d8ac775992585c 358 Pfam PF00111 2Fe-2S iron-sulfur cluster binding domain 272 345 1.2E-15 T 01-11-2018 IPR001041 2Fe-2S ferredoxin-type iron-sulfur binding domain GO:0009055|GO:0051536 CDA09_10500 0cb5872d8f38e10041d8ac775992585c 358 Pfam PF00175 Oxidoreductase NAD-binding domain 119 226 1.9E-18 T 01-11-2018 IPR001433 Oxidoreductase FAD/NAD(P)-binding GO:0016491|GO:0055114 CDA09_10500 0cb5872d8f38e10041d8ac775992585c 358 PRINTS PR00406 Cytochrome B5 reductase signature 153 164 3.8E-7 T 01-11-2018 IPR001834 NADH:cytochrome b5 reductase (CBR) GO:0016491|GO:0055114 Reactome: R-HSA-1237044 CDA09_10500 0cb5872d8f38e10041d8ac775992585c 358 PRINTS PR00406 Cytochrome B5 reductase signature 91 105 3.8E-7 T 01-11-2018 IPR001834 NADH:cytochrome b5 reductase (CBR) GO:0016491|GO:0055114 Reactome: R-HSA-1237044 CDA09_10500 0cb5872d8f38e10041d8ac775992585c 358 PRINTS PR00406 Cytochrome B5 reductase signature 212 220 3.8E-7 T 01-11-2018 IPR001834 NADH:cytochrome b5 reductase (CBR) GO:0016491|GO:0055114 Reactome: R-HSA-1237044 CDA09_10500 0cb5872d8f38e10041d8ac775992585c 358 PRINTS PR00406 Cytochrome B5 reductase signature 116 135 3.8E-7 T 01-11-2018 IPR001834 NADH:cytochrome b5 reductase (CBR) GO:0016491|GO:0055114 Reactome: R-HSA-1237044 CDA09_10500 0cb5872d8f38e10041d8ac775992585c 358 Gene3D G3DSA:2.40.30.10 2 101 3.4E-23 T 01-11-2018 CDA09_10500 0cb5872d8f38e10041d8ac775992585c 358 Gene3D G3DSA:3.40.50.80 102 239 6.5E-31 T 01-11-2018 IPR039261 Ferredoxin-NADP reductase (FNR), nucleotide-binding domain CDA09_10500 0cb5872d8f38e10041d8ac775992585c 358 Gene3D G3DSA:3.10.20.30 253 358 4.5E-28 T 01-11-2018 IPR012675 Beta-grasp domain superfamily CDA09_10500 0cb5872d8f38e10041d8ac775992585c 358 Pfam PF00970 Oxidoreductase FAD-binding domain 8 103 3.1E-11 T 01-11-2018 IPR008333 Flavoprotein pyridine nucleotide cytochrome reductase-like, FAD-binding domain Reactome: R-HSA-1237044 CDA09_11900 ae87bd33fb569f9bb3172d9eb48bf58c 692 SUPERFAMILY SSF52540 366 617 1.03E-70 T 01-11-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CDA09_11900 ae87bd33fb569f9bb3172d9eb48bf58c 692 Gene3D G3DSA:3.40.50.300 21 350 2.4E-89 T 01-11-2018 CDA09_11900 ae87bd33fb569f9bb3172d9eb48bf58c 692 Gene3D G3DSA:3.40.50.300 364 691 2.8E-98 T 01-11-2018 CDA09_11900 ae87bd33fb569f9bb3172d9eb48bf58c 692 ProSitePatterns PS00211 ABC transporters family signature. 174 188 - T 01-11-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 CDA09_11900 ae87bd33fb569f9bb3172d9eb48bf58c 692 TIGRFAM TIGR01727 oligo_HPY: oligopeptide/dipeptide ABC transporter, ATP-binding protein, C-terminal domain 595 689 6.2E-21 T 01-11-2018 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal GO:0000166|GO:0005524|GO:0015833 CDA09_11900 ae87bd33fb569f9bb3172d9eb48bf58c 692 TIGRFAM TIGR01727 oligo_HPY: oligopeptide/dipeptide ABC transporter, ATP-binding protein, C-terminal domain 252 336 9.3E-22 T 01-11-2018 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal GO:0000166|GO:0005524|GO:0015833 CDA09_11900 ae87bd33fb569f9bb3172d9eb48bf58c 692 Pfam PF08352 Oligopeptide/dipeptide transporter, C-terminal region 253 317 4.6E-15 T 01-11-2018 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal GO:0000166|GO:0005524|GO:0015833 CDA09_11900 ae87bd33fb569f9bb3172d9eb48bf58c 692 Pfam PF08352 Oligopeptide/dipeptide transporter, C-terminal region 597 670 2.6E-15 T 01-11-2018 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal GO:0000166|GO:0005524|GO:0015833 CDA09_11900 ae87bd33fb569f9bb3172d9eb48bf58c 692 Pfam PF00005 ABC transporter 394 546 2.3E-31 T 01-11-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 CDA09_11900 ae87bd33fb569f9bb3172d9eb48bf58c 692 SUPERFAMILY SSF52540 53 328 4.38E-62 T 01-11-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CDA09_11900 ae87bd33fb569f9bb3172d9eb48bf58c 692 Pfam PF00005 ABC transporter 44 201 1.6E-26 T 01-11-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 CDA09_11900 ae87bd33fb569f9bb3172d9eb48bf58c 692 SMART SM00382 402 595 7.5E-18 T 01-11-2018 IPR003593 AAA+ ATPase domain CDA09_11900 ae87bd33fb569f9bb3172d9eb48bf58c 692 SMART SM00382 52 251 2.3E-13 T 01-11-2018 IPR003593 AAA+ ATPase domain CDA09_11900 ae87bd33fb569f9bb3172d9eb48bf58c 692 ProSitePatterns PS00211 ABC transporters family signature. 518 532 - T 01-11-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 CDA09_03345 88c900059f89df9e7fe446a06ad7ea3a 340 Gene3D G3DSA:3.30.70.20 185 246 2.7E-5 T 01-11-2018 CDA09_03345 88c900059f89df9e7fe446a06ad7ea3a 340 Hamap MF_00916 Epoxyqueuosine reductase [queG]. 1 301 46.643 T 01-11-2018 IPR004453 Epoxyqueuosine reductase QueG GO:0008033|GO:0008616|GO:0016491 MetaCyc: PWY-6700 CDA09_03345 88c900059f89df9e7fe446a06ad7ea3a 340 TIGRFAM TIGR00276 TIGR00276: epoxyqueuosine reductase 2 335 1.3E-148 T 01-11-2018 IPR004453 Epoxyqueuosine reductase QueG GO:0008033|GO:0008616|GO:0016491 MetaCyc: PWY-6700 CDA09_03345 88c900059f89df9e7fe446a06ad7ea3a 340 SUPERFAMILY SSF54862 156 304 1.13E-18 T 01-11-2018 CDA09_03345 88c900059f89df9e7fe446a06ad7ea3a 340 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 179 190 - T 01-11-2018 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site CDA09_03345 88c900059f89df9e7fe446a06ad7ea3a 340 Pfam PF08331 Domain of unknown function (DUF1730) 49 126 4.4E-24 T 01-11-2018 IPR013542 Domain of unknown function DUF1730 MetaCyc: PWY-6700 CDA09_03345 88c900059f89df9e7fe446a06ad7ea3a 340 Pfam PF13484 4Fe-4S double cluster binding domain 178 242 7.5E-21 T 01-11-2018 CDA09_03530 1d97789eb3599a40bd28b844b6c3929b 141 Gene3D G3DSA:3.10.129.10 4 134 4.4E-34 T 01-11-2018 CDA09_03530 1d97789eb3599a40bd28b844b6c3929b 141 SUPERFAMILY SSF54637 3 136 4.34E-36 T 01-11-2018 IPR029069 HotDog domain superfamily CDA09_03530 1d97789eb3599a40bd28b844b6c3929b 141 Pfam PF13279 Thioesterase-like superfamily 16 129 4.7E-14 T 01-11-2018 CDA09_01970 e80e54a29952f61fc66474dea93ec1de 201 SUPERFAMILY SSF81452 20 200 1.7E-42 T 01-11-2018 IPR035973 Cytochrome c oxidase subunit III-like superfamily GO:0015002|GO:0016020 Reactome: R-HSA-5628897|Reactome: R-HSA-611105 CDA09_01970 e80e54a29952f61fc66474dea93ec1de 201 Gene3D G3DSA:1.20.120.80 22 201 2.8E-37 T 01-11-2018 IPR013833 Cytochrome c oxidase, subunit III, 4-helical bundle GO:0004129|GO:0016020|GO:0022904 Reactome: R-HSA-5628897|Reactome: R-HSA-611105 CDA09_09705 2182269fdbb338752b04c3b9bf595fea 351 ProSitePatterns PS00197 2Fe-2S ferredoxin-type iron-sulfur binding region signature. 298 306 - T 01-11-2018 IPR006058 2Fe-2S ferredoxin, iron-sulphur binding site GO:0051537 CDA09_09705 2182269fdbb338752b04c3b9bf595fea 351 Pfam PF00111 2Fe-2S iron-sulfur cluster binding domain 268 341 3.3E-15 T 01-11-2018 IPR001041 2Fe-2S ferredoxin-type iron-sulfur binding domain GO:0009055|GO:0051536 CDA09_09705 2182269fdbb338752b04c3b9bf595fea 351 SUPERFAMILY SSF54292 227 350 3.15E-25 T 01-11-2018 IPR036010 2Fe-2S ferredoxin-like superfamily GO:0009055|GO:0051536 CDA09_09705 2182269fdbb338752b04c3b9bf595fea 351 Pfam PF00175 Oxidoreductase NAD-binding domain 120 214 1.8E-13 T 01-11-2018 IPR001433 Oxidoreductase FAD/NAD(P)-binding GO:0016491|GO:0055114 CDA09_09705 2182269fdbb338752b04c3b9bf595fea 351 PRINTS PR00410 Phenol hydroxylase reductase family signature 103 112 1.5E-8 T 01-11-2018 IPR001221 Phenol hydroxylase reductase GO:0055114 CDA09_09705 2182269fdbb338752b04c3b9bf595fea 351 PRINTS PR00410 Phenol hydroxylase reductase family signature 40 52 1.5E-8 T 01-11-2018 IPR001221 Phenol hydroxylase reductase GO:0055114 CDA09_09705 2182269fdbb338752b04c3b9bf595fea 351 PRINTS PR00410 Phenol hydroxylase reductase family signature 118 137 1.5E-8 T 01-11-2018 IPR001221 Phenol hydroxylase reductase GO:0055114 CDA09_09705 2182269fdbb338752b04c3b9bf595fea 351 PRINTS PR00410 Phenol hydroxylase reductase family signature 202 210 1.5E-8 T 01-11-2018 IPR001221 Phenol hydroxylase reductase GO:0055114 CDA09_09705 2182269fdbb338752b04c3b9bf595fea 351 PRINTS PR00371 Flavoprotein pyridine nucleotide cytochrome reductase signature 142 151 7.8E-7 T 01-11-2018 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase GO:0016491|GO:0055114 CDA09_09705 2182269fdbb338752b04c3b9bf595fea 351 PRINTS PR00371 Flavoprotein pyridine nucleotide cytochrome reductase signature 118 137 7.8E-7 T 01-11-2018 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase GO:0016491|GO:0055114 CDA09_09705 2182269fdbb338752b04c3b9bf595fea 351 PRINTS PR00371 Flavoprotein pyridine nucleotide cytochrome reductase signature 40 50 7.8E-7 T 01-11-2018 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase GO:0016491|GO:0055114 CDA09_09705 2182269fdbb338752b04c3b9bf595fea 351 PRINTS PR00371 Flavoprotein pyridine nucleotide cytochrome reductase signature 59 66 7.8E-7 T 01-11-2018 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase GO:0016491|GO:0055114 CDA09_09705 2182269fdbb338752b04c3b9bf595fea 351 Gene3D G3DSA:3.10.20.30 241 350 4.4E-25 T 01-11-2018 IPR012675 Beta-grasp domain superfamily CDA09_09705 2182269fdbb338752b04c3b9bf595fea 351 Gene3D G3DSA:2.40.30.10 6 109 9.1E-28 T 01-11-2018 CDA09_09705 2182269fdbb338752b04c3b9bf595fea 351 Gene3D G3DSA:3.40.50.80 113 237 2.6E-28 T 01-11-2018 IPR039261 Ferredoxin-NADP reductase (FNR), nucleotide-binding domain CDA09_09705 2182269fdbb338752b04c3b9bf595fea 351 SUPERFAMILY SSF52343 99 232 5.63E-30 T 01-11-2018 IPR039261 Ferredoxin-NADP reductase (FNR), nucleotide-binding domain CDA09_09705 2182269fdbb338752b04c3b9bf595fea 351 Pfam PF00970 Oxidoreductase FAD-binding domain 12 108 1.0E-13 T 01-11-2018 IPR008333 Flavoprotein pyridine nucleotide cytochrome reductase-like, FAD-binding domain Reactome: R-HSA-1237044 CDA09_09705 2182269fdbb338752b04c3b9bf595fea 351 SUPERFAMILY SSF63380 4 110 8.98E-28 T 01-11-2018 IPR017938 Riboflavin synthase-like beta-barrel CDA09_18500 b232244d2d174eed93e57874940c2f1d 1073 PRINTS PR00702 Acriflavin resistance protein family signature 448 471 1.6E-20 T 01-11-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 CDA09_18500 b232244d2d174eed93e57874940c2f1d 1073 PRINTS PR00702 Acriflavin resistance protein family signature 49 67 1.6E-20 T 01-11-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 CDA09_18500 b232244d2d174eed93e57874940c2f1d 1073 PRINTS PR00702 Acriflavin resistance protein family signature 395 419 1.6E-20 T 01-11-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 CDA09_18500 b232244d2d174eed93e57874940c2f1d 1073 PRINTS PR00702 Acriflavin resistance protein family signature 473 496 1.6E-20 T 01-11-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 CDA09_18500 b232244d2d174eed93e57874940c2f1d 1073 PRINTS PR00702 Acriflavin resistance protein family signature 341 364 1.6E-20 T 01-11-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 CDA09_18500 b232244d2d174eed93e57874940c2f1d 1073 Pfam PF00873 AcrB/AcrD/AcrF family 20 1047 7.7E-163 T 01-11-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 CDA09_18500 b232244d2d174eed93e57874940c2f1d 1073 SUPERFAMILY SSF82714 196 275 3.4E-13 T 01-11-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains CDA09_18500 b232244d2d174eed93e57874940c2f1d 1073 SUPERFAMILY SSF82714 748 834 9.29E-15 T 01-11-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains CDA09_18500 b232244d2d174eed93e57874940c2f1d 1073 Gene3D G3DSA:3.30.70.1430 596 694 1.0E-250 T 01-11-2018 CDA09_18500 b232244d2d174eed93e57874940c2f1d 1073 SUPERFAMILY SSF82693 51 147 2.27E-19 T 01-11-2018 CDA09_18500 b232244d2d174eed93e57874940c2f1d 1073 Gene3D G3DSA:3.30.70.1320 147 337 1.0E-250 T 01-11-2018 CDA09_18500 b232244d2d174eed93e57874940c2f1d 1073 SUPERFAMILY SSF82693 148 334 2.2E-16 T 01-11-2018 CDA09_18500 b232244d2d174eed93e57874940c2f1d 1073 Gene3D G3DSA:3.30.2090.10 190 279 1.0E-250 T 01-11-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains CDA09_18500 b232244d2d174eed93e57874940c2f1d 1073 SUPERFAMILY SSF82866 310 499 4.84E-35 T 01-11-2018 CDA09_18500 b232244d2d174eed93e57874940c2f1d 1073 Gene3D G3DSA:3.30.2090.10 746 834 1.0E-250 T 01-11-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains CDA09_18500 b232244d2d174eed93e57874940c2f1d 1073 SUPERFAMILY SSF82693 598 673 7.06E-5 T 01-11-2018 CDA09_18500 b232244d2d174eed93e57874940c2f1d 1073 Gene3D G3DSA:1.20.1640.10 24 540 1.0E-250 T 01-11-2018 CDA09_18500 b232244d2d174eed93e57874940c2f1d 1073 SUPERFAMILY SSF82866 830 1054 2.35E-46 T 01-11-2018 CDA09_18500 b232244d2d174eed93e57874940c2f1d 1073 Gene3D G3DSA:3.30.70.1430 51 842 1.0E-250 T 01-11-2018 CDA09_18500 b232244d2d174eed93e57874940c2f1d 1073 Gene3D G3DSA:1.20.1640.10 541 1046 1.0E-250 T 01-11-2018 CDA09_18500 b232244d2d174eed93e57874940c2f1d 1073 Gene3D G3DSA:3.30.70.1440 695 894 1.0E-250 T 01-11-2018 CDA09_10175 1f1c4ed1ff9c4cde1b0791b2456cb952 319 Gene3D G3DSA:1.10.3720.10 72 314 3.5E-30 T 01-11-2018 IPR035906 MetI-like superfamily CDA09_10175 1f1c4ed1ff9c4cde1b0791b2456cb952 319 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 96 308 4.8E-19 T 01-11-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 CDA09_10175 1f1c4ed1ff9c4cde1b0791b2456cb952 319 TIGRFAM TIGR02138 phosphate_pstC: phosphate ABC transporter, permease protein PstC 23 311 1.6E-89 T 01-11-2018 IPR011864 Phosphate ABC transporter, permease protein PstC GO:0005315|GO:0006817|GO:0016021 CDA09_10175 1f1c4ed1ff9c4cde1b0791b2456cb952 319 SUPERFAMILY SSF161098 27 304 1.14E-31 T 01-11-2018 IPR035906 MetI-like superfamily CDA09_12270 a211d3be597c1b43c8486b79f526202a 456 Pfam PF17200 Single Cache domain 2 48 190 1.0E-36 T 01-11-2018 IPR033480 Single Cache domain 2 CDA09_12270 a211d3be597c1b43c8486b79f526202a 456 SMART SM00387 354 449 6.3E-10 T 01-11-2018 IPR003594 Histidine kinase/HSP90-like ATPase CDA09_12270 a211d3be597c1b43c8486b79f526202a 456 Gene3D G3DSA:3.30.565.10 319 447 4.7E-29 T 01-11-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily CDA09_12270 a211d3be597c1b43c8486b79f526202a 456 PIRSF PIRSF037314 1 456 1.5E-172 T 01-11-2018 IPR017171 Signal transduction histidine kinase, MctS CDA09_12270 a211d3be597c1b43c8486b79f526202a 456 SUPERFAMILY SSF55874 324 444 9.04E-17 T 01-11-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily CDA09_12270 a211d3be597c1b43c8486b79f526202a 456 Gene3D G3DSA:3.30.450.20 38 182 4.3E-43 T 01-11-2018 CDA09_12270 a211d3be597c1b43c8486b79f526202a 456 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 358 438 3.5E-6 T 01-11-2018 IPR003594 Histidine kinase/HSP90-like ATPase CDA09_12270 a211d3be597c1b43c8486b79f526202a 456 SMART SM01049 42 132 2.3E-25 T 01-11-2018 IPR033480 Single Cache domain 2 CDA09_12270 a211d3be597c1b43c8486b79f526202a 456 Pfam PF07730 Histidine kinase 249 316 5.4E-15 T 01-11-2018 IPR011712 Signal transduction histidine kinase, subgroup 3, dimerisation and phosphoacceptor domain GO:0000155|GO:0000160|GO:0016021|GO:0046983 CDA09_20265 c89f221e3d3d4a2809228d5cb0722b52 716 Pfam PF01569 PAP2 superfamily 342 448 8.2E-17 T 01-11-2018 IPR000326 Phosphatidic acid phosphatase type 2/haloperoxidase CDA09_20265 c89f221e3d3d4a2809228d5cb0722b52 716 SMART SM00014 340 450 4.3E-17 T 01-11-2018 IPR000326 Phosphatidic acid phosphatase type 2/haloperoxidase CDA09_20265 c89f221e3d3d4a2809228d5cb0722b52 716 SUPERFAMILY SSF48317 265 458 1.02E-32 T 01-11-2018 IPR036938 Phosphatidic acid phosphatase type 2/haloperoxidase superfamily CDA09_20265 c89f221e3d3d4a2809228d5cb0722b52 716 Gene3D G3DSA:1.20.144.10 366 476 3.4E-21 T 01-11-2018 CDA09_20265 c89f221e3d3d4a2809228d5cb0722b52 716 Pfam PF09335 SNARE associated Golgi protein 40 164 2.0E-19 T 01-11-2018 IPR032816 SNARE associated Golgi protein CDA09_20265 c89f221e3d3d4a2809228d5cb0722b52 716 Pfam PF14067 LssY C-terminus 525 694 9.0E-19 T 01-11-2018 IPR025902 LssY-like C-terminal domain CDA09_17050 020e22395f028506006b587f7d9e58ed 265 Gene3D G3DSA:1.10.12.10 206 265 7.2E-16 T 01-11-2018 IPR014748 Enoyl-CoA hydratase, C-terminal CDA09_17050 020e22395f028506006b587f7d9e58ed 265 Gene3D G3DSA:3.90.226.10 1 204 4.3E-57 T 01-11-2018 CDA09_17050 020e22395f028506006b587f7d9e58ed 265 ProSitePatterns PS00166 Enoyl-CoA hydratase/isomerase signature. 106 126 - T 01-11-2018 IPR018376 Enoyl-CoA hydratase/isomerase, conserved site GO:0003824 CDA09_17050 020e22395f028506006b587f7d9e58ed 265 Pfam PF00378 Enoyl-CoA hydratase/isomerase 14 264 3.7E-50 T 01-11-2018 IPR001753 Enoyl-CoA hydratase/isomerase GO:0003824 CDA09_17050 020e22395f028506006b587f7d9e58ed 265 SUPERFAMILY SSF52096 5 265 6.22E-75 T 01-11-2018 IPR029045 ClpP/crotonase-like domain superfamily CDA09_18485 b379500adbfb19c525a020b20b8515b9 437 TIGRFAM TIGR01844 type_I_sec_TolC: type I secretion outer membrane protein, TolC family 21 434 2.2E-97 T 01-11-2018 IPR010130 Type I secretion outer membrane protein, TolC GO:0015562|GO:0019867|GO:0055085 CDA09_18485 b379500adbfb19c525a020b20b8515b9 437 Pfam PF02321 Outer membrane efflux protein 234 421 7.6E-26 T 01-11-2018 IPR003423 Outer membrane efflux protein GO:0015562|GO:0055085 CDA09_18485 b379500adbfb19c525a020b20b8515b9 437 Pfam PF02321 Outer membrane efflux protein 22 209 3.1E-31 T 01-11-2018 IPR003423 Outer membrane efflux protein GO:0015562|GO:0055085 CDA09_18485 b379500adbfb19c525a020b20b8515b9 437 Gene3D G3DSA:1.20.1600.10 20 437 1.1E-113 T 01-11-2018 CDA09_18485 b379500adbfb19c525a020b20b8515b9 437 SUPERFAMILY SSF56954 1 426 8.89E-87 T 01-11-2018 CDA09_19510 999640cb85ba3ac9b89612a2c23795ab 275 TIGRFAM TIGR01171 rplB_bact: ribosomal protein uL2 4 273 3.8E-127 T 01-11-2018 IPR005880 Ribosomal protein L2, bacterial/organellar-type GO:0003723|GO:0003735|GO:0006412|GO:0015934|GO:0016740 CDA09_19510 999640cb85ba3ac9b89612a2c23795ab 275 SMART SM01382 124 252 4.8E-86 T 01-11-2018 IPR022669 Ribosomal protein L2, C-terminal GO:0003735|GO:0005840|GO:0006412 CDA09_19510 999640cb85ba3ac9b89612a2c23795ab 275 PIRSF PIRSF002158 9 275 1.3E-100 T 01-11-2018 IPR002171 Ribosomal protein L2 GO:0003735|GO:0005622|GO:0005840|GO:0006412 CDA09_19510 999640cb85ba3ac9b89612a2c23795ab 275 Gene3D G3DSA:2.30.30.30 118 195 2.2E-31 T 01-11-2018 IPR014722 Ribosomal protein L2, domain 2 CDA09_19510 999640cb85ba3ac9b89612a2c23795ab 275 Pfam PF03947 Ribosomal Proteins L2, C-terminal domain 125 250 8.0E-54 T 01-11-2018 IPR022669 Ribosomal protein L2, C-terminal GO:0003735|GO:0005840|GO:0006412 CDA09_19510 999640cb85ba3ac9b89612a2c23795ab 275 Pfam PF00181 Ribosomal Proteins L2, RNA binding domain 42 117 4.4E-33 T 01-11-2018 IPR022666 Ribosomal Proteins L2, RNA binding domain GO:0003735|GO:0005622|GO:0005840|GO:0006412 CDA09_19510 999640cb85ba3ac9b89612a2c23795ab 275 SMART SM01383 42 118 2.3E-44 T 01-11-2018 IPR002171 Ribosomal protein L2 GO:0003735|GO:0005622|GO:0005840|GO:0006412 CDA09_19510 999640cb85ba3ac9b89612a2c23795ab 275 SUPERFAMILY SSF50104 126 272 3.61E-58 T 01-11-2018 IPR008991 Translation protein SH3-like domain superfamily CDA09_19510 999640cb85ba3ac9b89612a2c23795ab 275 Hamap MF_01320_B 50S ribosomal protein L2 [rplB]. 1 273 45.778 T 01-11-2018 IPR005880 Ribosomal protein L2, bacterial/organellar-type GO:0003723|GO:0003735|GO:0006412|GO:0015934|GO:0016740 CDA09_19510 999640cb85ba3ac9b89612a2c23795ab 275 ProSitePatterns PS00467 Ribosomal protein L2 signature. 218 229 - T 01-11-2018 IPR022671 Ribosomal protein L2, conserved site GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 CDA09_19510 999640cb85ba3ac9b89612a2c23795ab 275 Gene3D G3DSA:4.10.950.10 196 274 8.6E-35 T 01-11-2018 IPR014726 Ribosomal protein L2, domain 3 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 CDA09_19510 999640cb85ba3ac9b89612a2c23795ab 275 SUPERFAMILY SSF50249 3 125 5.48E-48 T 01-11-2018 IPR012340 Nucleic acid-binding, OB-fold CDA09_19510 999640cb85ba3ac9b89612a2c23795ab 275 Gene3D G3DSA:2.40.50.140 1 114 4.9E-46 T 01-11-2018 CDA09_16075 38458856c979096ca1a69f65a5d6c653 600 Pfam PF06980 Protein of unknown function (DUF1302) 34 600 2.0E-169 T 01-11-2018 IPR010727 Protein of unknown function DUF1302 CDA09_06845 47883f543ddd06ae84b97bb1cca2da58 107 TIGRFAM TIGR00205 fliE: flagellar hook-basal body complex protein FliE 16 106 4.1E-24 T 01-11-2018 IPR001624 Flagellar hook-basal body complex protein FliE GO:0003774|GO:0005198|GO:0009288|GO:0071973 CDA09_06845 47883f543ddd06ae84b97bb1cca2da58 107 Pfam PF02049 Flagellar hook-basal body complex protein FliE 18 107 3.6E-30 T 01-11-2018 IPR001624 Flagellar hook-basal body complex protein FliE GO:0003774|GO:0005198|GO:0009288|GO:0071973 CDA09_06845 47883f543ddd06ae84b97bb1cca2da58 107 Hamap MF_00724 Flagellar hook-basal body complex protein FliE [fliE]. 4 107 18.364 T 01-11-2018 IPR001624 Flagellar hook-basal body complex protein FliE GO:0003774|GO:0005198|GO:0009288|GO:0071973 CDA09_06845 47883f543ddd06ae84b97bb1cca2da58 107 PRINTS PR01006 Flagellar hook-basal body complex protein FliE signature 92 105 5.0E-13 T 01-11-2018 IPR001624 Flagellar hook-basal body complex protein FliE GO:0003774|GO:0005198|GO:0009288|GO:0071973 CDA09_06845 47883f543ddd06ae84b97bb1cca2da58 107 PRINTS PR01006 Flagellar hook-basal body complex protein FliE signature 36 52 5.0E-13 T 01-11-2018 IPR001624 Flagellar hook-basal body complex protein FliE GO:0003774|GO:0005198|GO:0009288|GO:0071973 CDA09_06845 47883f543ddd06ae84b97bb1cca2da58 107 PRINTS PR01006 Flagellar hook-basal body complex protein FliE signature 71 87 5.0E-13 T 01-11-2018 IPR001624 Flagellar hook-basal body complex protein FliE GO:0003774|GO:0005198|GO:0009288|GO:0071973 CDA09_13380 24b6173f5eeaf0b2aff432b61c0690c2 284 PIRSF PIRSF028561 1 284 3.5E-108 T 01-11-2018 IPR014548 Predicted acyltransferase CDA09_13380 24b6173f5eeaf0b2aff432b61c0690c2 284 Pfam PF03279 Bacterial lipid A biosynthesis acyltransferase 72 265 3.0E-12 T 01-11-2018 IPR004960 Bacterial lipid A biosynthesis acyltransferase GO:0016021|GO:0016740 CDA09_00995 a698315709618e5199b3b2a083410740 143 Pfam PF08334 Type II secretion system (T2SS), protein G 37 142 4.4E-44 T 01-11-2018 IPR013545 Type II secretion system protein G CDA09_00995 a698315709618e5199b3b2a083410740 143 ProSitePatterns PS00409 Prokaryotic N-terminal methylation site. 12 32 - T 01-11-2018 IPR012902 Prokaryotic N-terminal methylation site CDA09_00995 a698315709618e5199b3b2a083410740 143 PRINTS PR00813 Bacterial general secretion pathway protein G signature 49 67 1.0E-16 T 01-11-2018 IPR000983 Bacterial general secretion pathway protein G-type pilin GO:0008565|GO:0015627|GO:0015628 CDA09_00995 a698315709618e5199b3b2a083410740 143 PRINTS PR00813 Bacterial general secretion pathway protein G signature 13 38 1.0E-16 T 01-11-2018 IPR000983 Bacterial general secretion pathway protein G-type pilin GO:0008565|GO:0015627|GO:0015628 CDA09_00995 a698315709618e5199b3b2a083410740 143 TIGRFAM TIGR02532 IV_pilin_GFxxxE: prepilin-type N-terminal cleavage/methylation domain 12 33 9.5E-8 T 01-11-2018 IPR012902 Prokaryotic N-terminal methylation site CDA09_00995 a698315709618e5199b3b2a083410740 143 SUPERFAMILY SSF54523 40 142 1.57E-36 T 01-11-2018 CDA09_00995 a698315709618e5199b3b2a083410740 143 Pfam PF07963 Prokaryotic N-terminal methylation motif 11 33 5.2E-8 T 01-11-2018 IPR012902 Prokaryotic N-terminal methylation site CDA09_00995 a698315709618e5199b3b2a083410740 143 TIGRFAM TIGR01710 typeII_sec_gspG: type II secretion system protein G 12 143 2.2E-57 T 01-11-2018 IPR010054 General secretion pathway protein G GO:0008565|GO:0015627|GO:0015628 CDA09_00995 a698315709618e5199b3b2a083410740 143 Gene3D G3DSA:3.30.700.10 37 142 2.2E-37 T 01-11-2018 CDA09_21395 6a5e491bda15af27a12d1579fbd9b93b 142 Pfam PF01527 Transposase 21 75 8.3E-12 T 01-11-2018 IPR002514 Transposase IS3/IS911family GO:0003677|GO:0004803|GO:0006313 CDA09_21395 6a5e491bda15af27a12d1579fbd9b93b 142 SUPERFAMILY SSF46689 20 65 6.63E-8 T 01-11-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 CDA09_12780 0e82905cbb102062cb69a61c7daca0b7 215 Pfam PF03886 ABC-type transport auxiliary lipoprotein component 64 196 5.3E-14 T 01-11-2018 IPR005586 ABC-type transport auxiliary lipoprotein component CDA09_12780 0e82905cbb102062cb69a61c7daca0b7 215 Gene3D G3DSA:3.40.50.10610 37 208 4.2E-25 T 01-11-2018 CDA09_12780 0e82905cbb102062cb69a61c7daca0b7 215 SUPERFAMILY SSF159594 44 202 1.86E-35 T 01-11-2018 CDA09_09485 3b8c321a4d99152b2500ceabf631b216 400 ProSitePatterns PS00737 Thiolases signature 2. 346 362 - T 01-11-2018 IPR020613 Thiolase, conserved site GO:0016747 CDA09_09485 3b8c321a4d99152b2500ceabf631b216 400 TIGRFAM TIGR01930 AcCoA-C-Actrans: acetyl-CoA C-acyltransferase 6 398 4.8E-126 T 01-11-2018 IPR002155 Thiolase GO:0016747 CDA09_09485 3b8c321a4d99152b2500ceabf631b216 400 Pfam PF02803 Thiolase, C-terminal domain 279 398 2.0E-43 T 01-11-2018 IPR020617 Thiolase, C-terminal GO:0016747 CDA09_09485 3b8c321a4d99152b2500ceabf631b216 400 SUPERFAMILY SSF53901 279 399 3.29E-40 T 01-11-2018 IPR016039 Thiolase-like GO:0003824 CDA09_09485 3b8c321a4d99152b2500ceabf631b216 400 Gene3D G3DSA:3.40.47.10 137 394 2.8E-135 T 01-11-2018 IPR016039 Thiolase-like GO:0003824 CDA09_09485 3b8c321a4d99152b2500ceabf631b216 400 PIRSF PIRSF000429 1 400 2.4E-116 T 01-11-2018 IPR002155 Thiolase GO:0016747 CDA09_09485 3b8c321a4d99152b2500ceabf631b216 400 Pfam PF00108 Thiolase, N-terminal domain 5 269 1.5E-61 T 01-11-2018 IPR020616 Thiolase, N-terminal GO:0016747 CDA09_09485 3b8c321a4d99152b2500ceabf631b216 400 Gene3D G3DSA:3.40.47.10 4 287 2.8E-135 T 01-11-2018 IPR016039 Thiolase-like GO:0003824 CDA09_09485 3b8c321a4d99152b2500ceabf631b216 400 SUPERFAMILY SSF53901 1 274 8.35E-66 T 01-11-2018 IPR016039 Thiolase-like GO:0003824 CDA09_22945 2c22d1661a65cdfdd5988dee627c0047 567 ProSitePatterns PS01120 Urease nickel ligands signature. 128 141 - T 01-11-2018 IPR029754 Urease nickel binding site GO:0016151 KEGG: 00220+3.5.1.5|KEGG: 00230+3.5.1.5|KEGG: 00791+3.5.1.5|MetaCyc: PWY-5704 CDA09_22945 2c22d1661a65cdfdd5988dee627c0047 567 TIGRFAM TIGR01792 urease_alph: urease, alpha subunit 4 567 3.1E-295 T 01-11-2018 IPR005848 Urease, alpha subunit GO:0006807|GO:0009039|GO:0016151 KEGG: 00220+3.5.1.5|KEGG: 00230+3.5.1.5|KEGG: 00791+3.5.1.5|MetaCyc: PWY-5704 CDA09_22945 2c22d1661a65cdfdd5988dee627c0047 567 Pfam PF00449 Urease alpha-subunit, N-terminal domain 4 120 2.7E-55 T 01-11-2018 IPR011612 Urease alpha-subunit, N-terminal domain KEGG: 00220+3.5.1.5|KEGG: 00230+3.5.1.5|KEGG: 00791+3.5.1.5|MetaCyc: PWY-5704 CDA09_22945 2c22d1661a65cdfdd5988dee627c0047 567 Gene3D G3DSA:3.20.20.140 130 567 1.6E-298 T 01-11-2018 CDA09_22945 2c22d1661a65cdfdd5988dee627c0047 567 SUPERFAMILY SSF51338 424 478 5.83E-6 T 01-11-2018 IPR011059 Metal-dependent hydrolase, composite domain superfamily GO:0016810 CDA09_22945 2c22d1661a65cdfdd5988dee627c0047 567 ProSitePatterns PS00145 Urease active site. 318 334 - T 01-11-2018 IPR017950 Urease active site GO:0009039 KEGG: 00220+3.5.1.5|KEGG: 00230+3.5.1.5|KEGG: 00791+3.5.1.5|MetaCyc: PWY-5704 CDA09_22945 2c22d1661a65cdfdd5988dee627c0047 567 SUPERFAMILY SSF51338 4 178 1.73E-62 T 01-11-2018 IPR011059 Metal-dependent hydrolase, composite domain superfamily GO:0016810 CDA09_22945 2c22d1661a65cdfdd5988dee627c0047 567 SUPERFAMILY SSF51556 130 567 1.07E-201 T 01-11-2018 IPR032466 Metal-dependent hydrolase CDA09_22945 2c22d1661a65cdfdd5988dee627c0047 567 Hamap MF_01953 Urease subunit alpha [ureC]. 3 567 57.238 T 01-11-2018 IPR005848 Urease, alpha subunit GO:0006807|GO:0009039|GO:0016151 KEGG: 00220+3.5.1.5|KEGG: 00230+3.5.1.5|KEGG: 00791+3.5.1.5|MetaCyc: PWY-5704 CDA09_22945 2c22d1661a65cdfdd5988dee627c0047 567 Pfam PF01979 Amidohydrolase family 126 455 7.4E-83 T 01-11-2018 IPR006680 Amidohydrolase-related GO:0016787 CDA09_22945 2c22d1661a65cdfdd5988dee627c0047 567 Gene3D G3DSA:2.30.40.10 5 481 1.6E-298 T 01-11-2018 IPR011059 Metal-dependent hydrolase, composite domain superfamily GO:0016810 CDA09_22945 2c22d1661a65cdfdd5988dee627c0047 567 PRINTS PR01752 Urea amidohydrolase (urease) protein signature 296 313 1.1E-34 T 01-11-2018 IPR005848 Urease, alpha subunit GO:0006807|GO:0009039|GO:0016151 KEGG: 00220+3.5.1.5|KEGG: 00230+3.5.1.5|KEGG: 00791+3.5.1.5|MetaCyc: PWY-5704 CDA09_22945 2c22d1661a65cdfdd5988dee627c0047 567 PRINTS PR01752 Urea amidohydrolase (urease) protein signature 335 351 1.1E-34 T 01-11-2018 IPR005848 Urease, alpha subunit GO:0006807|GO:0009039|GO:0016151 KEGG: 00220+3.5.1.5|KEGG: 00230+3.5.1.5|KEGG: 00791+3.5.1.5|MetaCyc: PWY-5704 CDA09_22945 2c22d1661a65cdfdd5988dee627c0047 567 PRINTS PR01752 Urea amidohydrolase (urease) protein signature 428 441 1.1E-34 T 01-11-2018 IPR005848 Urease, alpha subunit GO:0006807|GO:0009039|GO:0016151 KEGG: 00220+3.5.1.5|KEGG: 00230+3.5.1.5|KEGG: 00791+3.5.1.5|MetaCyc: PWY-5704 CDA09_22945 2c22d1661a65cdfdd5988dee627c0047 567 PRINTS PR01752 Urea amidohydrolase (urease) protein signature 402 417 1.1E-34 T 01-11-2018 IPR005848 Urease, alpha subunit GO:0006807|GO:0009039|GO:0016151 KEGG: 00220+3.5.1.5|KEGG: 00230+3.5.1.5|KEGG: 00791+3.5.1.5|MetaCyc: PWY-5704 CDA09_19470 9be27ec4d52377a06bcf5113cc8901b1 105 Hamap MF_01326_B 50S ribosomal protein L24 [rplX]. 2 97 19.541 T 01-11-2018 IPR003256 Ribosomal protein L24 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 CDA09_19470 9be27ec4d52377a06bcf5113cc8901b1 105 ProSitePatterns PS01108 Ribosomal protein L24 signature. 7 24 - T 01-11-2018 IPR005825 Ribosomal protein L24/L26, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 CDA09_19470 9be27ec4d52377a06bcf5113cc8901b1 105 SMART SM00739 3 30 7.8E-4 T 01-11-2018 IPR005824 KOW CDA09_19470 9be27ec4d52377a06bcf5113cc8901b1 105 Gene3D G3DSA:2.30.30.30 1 104 2.4E-34 T 01-11-2018 IPR014722 Ribosomal protein L2, domain 2 CDA09_19470 9be27ec4d52377a06bcf5113cc8901b1 105 SUPERFAMILY SSF50104 3 101 9.53E-30 T 01-11-2018 IPR008991 Translation protein SH3-like domain superfamily CDA09_19470 9be27ec4d52377a06bcf5113cc8901b1 105 TIGRFAM TIGR01079 rplX_bact: ribosomal protein uL24 1 102 7.0E-35 T 01-11-2018 IPR003256 Ribosomal protein L24 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 CDA09_19470 9be27ec4d52377a06bcf5113cc8901b1 105 Pfam PF17136 Ribosomal proteins 50S L24/mitochondrial 39S L24 38 101 3.3E-23 T 01-11-2018 IPR003256 Ribosomal protein L24 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 CDA09_06620 4d3a4d848831e9de447d8f2ecaf8f949 792 SMART SM00304 298 350 3.8E-11 T 01-11-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 CDA09_06620 4d3a4d848831e9de447d8f2ecaf8f949 792 Pfam PF14827 Double sensory domain of two-component sensor kinase 38 219 1.3E-12 T 01-11-2018 IPR029150 Double Cache domain 3 CDA09_06620 4d3a4d848831e9de447d8f2ecaf8f949 792 Pfam PF00563 EAL domain 535 768 3.6E-77 T 01-11-2018 IPR001633 EAL domain CDA09_06620 4d3a4d848831e9de447d8f2ecaf8f949 792 Gene3D G3DSA:3.30.70.270 357 521 5.1E-54 T 01-11-2018 CDA09_06620 4d3a4d848831e9de447d8f2ecaf8f949 792 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 353 510 1.6E-40 T 01-11-2018 IPR000160 GGDEF domain CDA09_06620 4d3a4d848831e9de447d8f2ecaf8f949 792 SUPERFAMILY SSF55073 361 510 9.42E-48 T 01-11-2018 IPR029787 Nucleotide cyclase CDA09_06620 4d3a4d848831e9de447d8f2ecaf8f949 792 Pfam PF00672 HAMP domain 298 344 4.2E-11 T 01-11-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 CDA09_06620 4d3a4d848831e9de447d8f2ecaf8f949 792 SUPERFAMILY SSF141868 534 781 1.01E-92 T 01-11-2018 IPR035919 EAL domain superfamily CDA09_06620 4d3a4d848831e9de447d8f2ecaf8f949 792 Gene3D G3DSA:3.20.20.450 532 788 2.0E-101 T 01-11-2018 IPR035919 EAL domain superfamily CDA09_06620 4d3a4d848831e9de447d8f2ecaf8f949 792 SMART SM00052 528 773 4.1E-118 T 01-11-2018 IPR001633 EAL domain CDA09_06620 4d3a4d848831e9de447d8f2ecaf8f949 792 SMART SM00267 345 516 2.9E-62 T 01-11-2018 IPR000160 GGDEF domain CDA09_06620 4d3a4d848831e9de447d8f2ecaf8f949 792 SUPERFAMILY SSF158472 298 344 8.89E-10 T 01-11-2018 CDA09_06620 4d3a4d848831e9de447d8f2ecaf8f949 792 Pfam PF00990 Diguanylate cyclase, GGDEF domain 356 510 2.5E-47 T 01-11-2018 IPR000160 GGDEF domain CDA09_06620 4d3a4d848831e9de447d8f2ecaf8f949 792 Gene3D G3DSA:1.20.1480.50 258 355 1.0E-12 T 01-11-2018 CDA09_13130 4fcc048ed4250310c86ee91a49d95b75 632 ProSitePatterns PS01096 PpiC-type peptidyl-prolyl cis-trans isomerase signature. 306 327 - T 01-11-2018 IPR023058 Peptidyl-prolyl cis-trans isomerase, PpiC-type, conserved site Reactome: R-HSA-1169408|Reactome: R-HSA-6804756|Reactome: R-HSA-6811555|Reactome: R-HSA-936440 CDA09_13130 4fcc048ed4250310c86ee91a49d95b75 632 Pfam PF13616 PPIC-type PPIASE domain 262 368 1.1E-27 T 01-11-2018 CDA09_13130 4fcc048ed4250310c86ee91a49d95b75 632 Gene3D G3DSA:1.10.4030.30 41 189 1.0E-11 T 01-11-2018 CDA09_13130 4fcc048ed4250310c86ee91a49d95b75 632 SUPERFAMILY SSF54534 257 367 3.92E-32 T 01-11-2018 CDA09_13130 4fcc048ed4250310c86ee91a49d95b75 632 Pfam PF13624 SurA N-terminal domain 1 161 1.1E-45 T 01-11-2018 CDA09_13130 4fcc048ed4250310c86ee91a49d95b75 632 Gene3D G3DSA:3.10.50.40 265 369 2.4E-41 T 01-11-2018 CDA09_13130 4fcc048ed4250310c86ee91a49d95b75 632 SUPERFAMILY SSF109998 40 235 7.85E-24 T 01-11-2018 IPR027304 Trigger factor/SurA domain superfamily CDA09_13130 4fcc048ed4250310c86ee91a49d95b75 632 Gene3D G3DSA:1.10.4030.30 237 385 2.4E-41 T 01-11-2018 CDA09_18915 ecb5ac00a70703e8e91a4752445032f4 818 SUPERFAMILY SSF141868 558 809 5.23E-82 T 01-11-2018 IPR035919 EAL domain superfamily CDA09_18915 ecb5ac00a70703e8e91a4752445032f4 818 Gene3D G3DSA:3.20.20.450 557 810 1.2E-92 T 01-11-2018 IPR035919 EAL domain superfamily CDA09_18915 ecb5ac00a70703e8e91a4752445032f4 818 SMART SM00052 553 802 5.3E-97 T 01-11-2018 IPR001633 EAL domain CDA09_18915 ecb5ac00a70703e8e91a4752445032f4 818 Pfam PF00563 EAL domain 560 797 1.5E-71 T 01-11-2018 IPR001633 EAL domain CDA09_18915 ecb5ac00a70703e8e91a4752445032f4 818 SMART SM00267 368 543 2.3E-43 T 01-11-2018 IPR000160 GGDEF domain CDA09_18915 ecb5ac00a70703e8e91a4752445032f4 818 SUPERFAMILY SSF55073 384 544 1.02E-35 T 01-11-2018 IPR029787 Nucleotide cyclase CDA09_18915 ecb5ac00a70703e8e91a4752445032f4 818 Pfam PF08447 PAS fold 273 361 2.1E-16 T 01-11-2018 IPR013655 PAS fold-3 GO:0005515 CDA09_18915 ecb5ac00a70703e8e91a4752445032f4 818 SUPERFAMILY SSF158472 186 236 1.27E-8 T 01-11-2018 CDA09_18915 ecb5ac00a70703e8e91a4752445032f4 818 Gene3D G3DSA:1.20.1480.50 149 245 2.3E-8 T 01-11-2018 CDA09_18915 ecb5ac00a70703e8e91a4752445032f4 818 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 375 541 1.2E-30 T 01-11-2018 IPR000160 GGDEF domain CDA09_18915 ecb5ac00a70703e8e91a4752445032f4 818 SMART SM00086 326 368 1.3E-6 T 01-11-2018 IPR001610 PAC motif CDA09_18915 ecb5ac00a70703e8e91a4752445032f4 818 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 247 374 1.5E-7 T 01-11-2018 IPR000014 PAS domain CDA09_18915 ecb5ac00a70703e8e91a4752445032f4 818 SUPERFAMILY SSF55785 236 365 4.54E-19 T 01-11-2018 IPR035965 PAS domain superfamily CDA09_18915 ecb5ac00a70703e8e91a4752445032f4 818 Gene3D G3DSA:3.30.70.270 373 556 1.2E-43 T 01-11-2018 CDA09_18915 ecb5ac00a70703e8e91a4752445032f4 818 SMART SM00304 185 237 3.3E-12 T 01-11-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 CDA09_18915 ecb5ac00a70703e8e91a4752445032f4 818 Gene3D G3DSA:3.30.450.20 246 364 1.5E-28 T 01-11-2018 CDA09_18915 ecb5ac00a70703e8e91a4752445032f4 818 Pfam PF00672 HAMP domain 187 234 3.5E-9 T 01-11-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 CDA09_18915 ecb5ac00a70703e8e91a4752445032f4 818 Pfam PF00990 Diguanylate cyclase, GGDEF domain 379 537 5.4E-38 T 01-11-2018 IPR000160 GGDEF domain CDA09_08550 6895ddb8826bd21a70e9ec873e173ad6 480 Gene3D G3DSA:1.10.4160.10 1 448 2.8E-40 T 01-11-2018 IPR038271 Purine-cytosine permease superfamily CDA09_08550 6895ddb8826bd21a70e9ec873e173ad6 480 Pfam PF02133 Permease for cytosine/purines, uracil, thiamine, allantoin 4 438 1.1E-38 T 01-11-2018 IPR001248 Purine-cytosine permease GO:0016020|GO:0022857|GO:0055085 CDA09_08550 6895ddb8826bd21a70e9ec873e173ad6 480 PIRSF PIRSF002744 1 465 1.8E-106 T 01-11-2018 IPR026030 Purine-cytosine permease Fcy2/21/22 GO:0005215|GO:0016021|GO:0055085 CDA09_16055 5ae96b479b6ecab33f742b2855f60b07 500 ProSitePatterns PS00070 Aldehyde dehydrogenases cysteine active site. 300 311 - T 01-11-2018 IPR016160 Aldehyde dehydrogenase, cysteine active site GO:0016491|GO:0055114 CDA09_16055 5ae96b479b6ecab33f742b2855f60b07 500 SUPERFAMILY SSF53720 16 498 3.27E-174 T 01-11-2018 IPR016161 Aldehyde/histidinol dehydrogenase GO:0016491|GO:0055114 CDA09_16055 5ae96b479b6ecab33f742b2855f60b07 500 Gene3D G3DSA:3.40.605.10 34 494 1.4E-194 T 01-11-2018 IPR016162 Aldehyde dehydrogenase, N-terminal GO:0016491|GO:0055114 CDA09_16055 5ae96b479b6ecab33f742b2855f60b07 500 ProSitePatterns PS00687 Aldehyde dehydrogenases glutamic acid active site. 272 279 - T 01-11-2018 IPR029510 Aldehyde dehydrogenase, glutamic acid active site GO:0016491|GO:0055114 CDA09_16055 5ae96b479b6ecab33f742b2855f60b07 500 Pfam PF00171 Aldehyde dehydrogenase family 29 496 4.6E-179 T 01-11-2018 IPR015590 Aldehyde dehydrogenase domain GO:0016491|GO:0055114 CDA09_16055 5ae96b479b6ecab33f742b2855f60b07 500 Gene3D G3DSA:3.40.309.10 276 465 1.4E-194 T 01-11-2018 IPR016163 Aldehyde dehydrogenase, C-terminal GO:0016491|GO:0016620|GO:0055114 CDA09_07840 5aa3cda3b3ce0df4939f794773c7d95e 260 TIGRFAM TIGR04557 fuse_rel_SoxYZ: quinoprotein dehydrogenase-associated SoxYZ-like carrier 40 254 2.8E-64 T 01-11-2018 IPR030831 Quinoprotein dehydrogenase-associated SoxYZ-like carrier CDA09_07840 5aa3cda3b3ce0df4939f794773c7d95e 260 Pfam PF13501 Sulfur oxidation protein SoxY 46 149 4.6E-26 T 01-11-2018 IPR032711 Ig-like SoxY domain CDA09_07840 5aa3cda3b3ce0df4939f794773c7d95e 260 Gene3D G3DSA:2.60.40.10 171 259 4.8E-6 T 01-11-2018 IPR013783 Immunoglobulin-like fold CDA09_07840 5aa3cda3b3ce0df4939f794773c7d95e 260 Pfam PF08770 Sulphur oxidation protein SoxZ 178 254 2.7E-7 T 01-11-2018 IPR014880 Sulphur oxidation protein SoxZ CDA09_07840 5aa3cda3b3ce0df4939f794773c7d95e 260 SUPERFAMILY SSF81296 176 258 3.08E-13 T 01-11-2018 IPR014756 Immunoglobulin E-set CDA09_07840 5aa3cda3b3ce0df4939f794773c7d95e 260 Gene3D G3DSA:2.60.40.2470 21 149 1.2E-24 T 01-11-2018 IPR038162 Ig-like SoxY domain superfamily CDA09_03150 d28d5cc5ea807d6e639071717607d9b8 1062 SUPERFAMILY SSF82714 185 269 9.02E-18 T 01-11-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains CDA09_03150 d28d5cc5ea807d6e639071717607d9b8 1062 SUPERFAMILY SSF82693 46 127 1.75E-20 T 01-11-2018 CDA09_03150 d28d5cc5ea807d6e639071717607d9b8 1062 Gene3D G3DSA:3.30.70.1430 569 671 3.0E-263 T 01-11-2018 CDA09_03150 d28d5cc5ea807d6e639071717607d9b8 1062 SUPERFAMILY SSF82693 137 328 2.01E-22 T 01-11-2018 CDA09_03150 d28d5cc5ea807d6e639071717607d9b8 1062 PRINTS PR00702 Acriflavin resistance protein family signature 361 382 5.6E-20 T 01-11-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 CDA09_03150 d28d5cc5ea807d6e639071717607d9b8 1062 PRINTS PR00702 Acriflavin resistance protein family signature 334 357 5.6E-20 T 01-11-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 CDA09_03150 d28d5cc5ea807d6e639071717607d9b8 1062 PRINTS PR00702 Acriflavin resistance protein family signature 552 569 5.6E-20 T 01-11-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 CDA09_03150 d28d5cc5ea807d6e639071717607d9b8 1062 PRINTS PR00702 Acriflavin resistance protein family signature 389 413 5.6E-20 T 01-11-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 CDA09_03150 d28d5cc5ea807d6e639071717607d9b8 1062 PRINTS PR00702 Acriflavin resistance protein family signature 40 58 5.6E-20 T 01-11-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 CDA09_03150 d28d5cc5ea807d6e639071717607d9b8 1062 Gene3D G3DSA:3.30.2090.10 723 811 3.0E-263 T 01-11-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains CDA09_03150 d28d5cc5ea807d6e639071717607d9b8 1062 Gene3D G3DSA:1.20.1640.10 516 1033 3.0E-263 T 01-11-2018 CDA09_03150 d28d5cc5ea807d6e639071717607d9b8 1062 Gene3D G3DSA:3.30.2090.10 182 274 3.0E-263 T 01-11-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains CDA09_03150 d28d5cc5ea807d6e639071717607d9b8 1062 SUPERFAMILY SSF82714 723 807 6.02E-17 T 01-11-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains CDA09_03150 d28d5cc5ea807d6e639071717607d9b8 1062 Gene3D G3DSA:3.30.70.1320 135 328 3.0E-263 T 01-11-2018 CDA09_03150 d28d5cc5ea807d6e639071717607d9b8 1062 SUPERFAMILY SSF82866 294 505 1.83E-37 T 01-11-2018 CDA09_03150 d28d5cc5ea807d6e639071717607d9b8 1062 TIGRFAM TIGR00914 2A0601: heavy metal efflux pump, CzcA family 1 1041 0.0 T 01-11-2018 IPR004763 Cation efflux system CzcA/CusA/SilA/NccA/HelA/CnrA GO:0006812|GO:0008324|GO:0016021 CDA09_03150 d28d5cc5ea807d6e639071717607d9b8 1062 Gene3D G3DSA:3.30.70.1440 672 869 3.0E-263 T 01-11-2018 CDA09_03150 d28d5cc5ea807d6e639071717607d9b8 1062 Gene3D G3DSA:1.20.1640.10 15 515 3.0E-263 T 01-11-2018 CDA09_03150 d28d5cc5ea807d6e639071717607d9b8 1062 Pfam PF00873 AcrB/AcrD/AcrF family 6 1036 9.1E-237 T 01-11-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 CDA09_03150 d28d5cc5ea807d6e639071717607d9b8 1062 Gene3D G3DSA:3.30.70.1430 42 819 3.0E-263 T 01-11-2018 CDA09_03150 d28d5cc5ea807d6e639071717607d9b8 1062 SUPERFAMILY SSF82866 807 1042 1.83E-47 T 01-11-2018 CDA09_17855 6a805807c57bf24a8b9e76a9d8596bdf 350 Gene3D G3DSA:3.40.50.720 134 341 9.7E-143 T 01-11-2018 CDA09_17855 6a805807c57bf24a8b9e76a9d8596bdf 350 SUPERFAMILY SSF53223 5 136 1.98E-43 T 01-11-2018 CDA09_17855 6a805807c57bf24a8b9e76a9d8596bdf 350 PRINTS PR00082 Glutamate/leucine/phenylalanine/valine dehydrogenase signature 180 200 5.9E-16 T 01-11-2018 IPR006095 Glutamate/phenylalanine/leucine/valine dehydrogenase GO:0006520|GO:0016491|GO:0055114 Reactome: R-HSA-2151201|Reactome: R-HSA-70614 CDA09_17855 6a805807c57bf24a8b9e76a9d8596bdf 350 PRINTS PR00082 Glutamate/leucine/phenylalanine/valine dehydrogenase signature 66 80 5.9E-16 T 01-11-2018 IPR006095 Glutamate/phenylalanine/leucine/valine dehydrogenase GO:0006520|GO:0016491|GO:0055114 Reactome: R-HSA-2151201|Reactome: R-HSA-70614 CDA09_17855 6a805807c57bf24a8b9e76a9d8596bdf 350 PRINTS PR00082 Glutamate/leucine/phenylalanine/valine dehydrogenase signature 290 301 5.9E-16 T 01-11-2018 IPR006095 Glutamate/phenylalanine/leucine/valine dehydrogenase GO:0006520|GO:0016491|GO:0055114 Reactome: R-HSA-2151201|Reactome: R-HSA-70614 CDA09_17855 6a805807c57bf24a8b9e76a9d8596bdf 350 PIRSF PIRSF000188 1 350 1.0E-147 T 01-11-2018 IPR016211 Glutamate/phenylalanine/leucine/valine dehydrogenase, bacterial/archaeal GO:0016639|GO:0055114 CDA09_17855 6a805807c57bf24a8b9e76a9d8596bdf 350 SMART SM00839 148 350 9.1E-80 T 01-11-2018 IPR006096 Glutamate/phenylalanine/leucine/valine dehydrogenase, C-terminal GO:0006520|GO:0016491|GO:0055114 Reactome: R-HSA-2151201|Reactome: R-HSA-70614 CDA09_17855 6a805807c57bf24a8b9e76a9d8596bdf 350 SUPERFAMILY SSF51735 147 348 1.74E-53 T 01-11-2018 IPR036291 NAD(P)-binding domain superfamily CDA09_17855 6a805807c57bf24a8b9e76a9d8596bdf 350 Gene3D G3DSA:3.40.50.10860 11 348 9.7E-143 T 01-11-2018 CDA09_17855 6a805807c57bf24a8b9e76a9d8596bdf 350 Pfam PF00208 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase 221 328 8.1E-11 T 01-11-2018 IPR006096 Glutamate/phenylalanine/leucine/valine dehydrogenase, C-terminal GO:0006520|GO:0016491|GO:0055114 Reactome: R-HSA-2151201|Reactome: R-HSA-70614 CDA09_17855 6a805807c57bf24a8b9e76a9d8596bdf 350 Pfam PF00208 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase 152 202 2.7E-5 T 01-11-2018 IPR006096 Glutamate/phenylalanine/leucine/valine dehydrogenase, C-terminal GO:0006520|GO:0016491|GO:0055114 Reactome: R-HSA-2151201|Reactome: R-HSA-70614 CDA09_17855 6a805807c57bf24a8b9e76a9d8596bdf 350 Pfam PF02812 Glu/Leu/Phe/Val dehydrogenase, dimerisation domain 13 128 3.2E-26 T 01-11-2018 IPR006097 Glutamate/phenylalanine/leucine/valine dehydrogenase, dimerisation domain GO:0006520|GO:0016491|GO:0055114 Reactome: R-HSA-2151201|Reactome: R-HSA-70614 CDA09_17855 6a805807c57bf24a8b9e76a9d8596bdf 350 ProSitePatterns PS00074 Glu / Leu / Phe / Val dehydrogenases active site. 74 87 - T 01-11-2018 IPR033524 Leu/Phe/Val dehydrogenases active site Reactome: R-HSA-2151201|Reactome: R-HSA-70614 CDA09_14750 72750d2e12d5acb007224909b00d901c 298 Pfam PF00440 Bacterial regulatory proteins, tetR family 120 166 7.2E-18 T 01-11-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 CDA09_14750 72750d2e12d5acb007224909b00d901c 298 SUPERFAMILY SSF46689 110 192 1.44E-20 T 01-11-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 CDA09_14750 72750d2e12d5acb007224909b00d901c 298 Gene3D G3DSA:1.10.357.10 162 296 7.8E-25 T 01-11-2018 CDA09_14750 72750d2e12d5acb007224909b00d901c 298 SUPERFAMILY SSF48498 187 296 2.49E-11 T 01-11-2018 IPR036271 Tetracyclin repressor-like, C-terminal domain superfamily CDA09_14750 72750d2e12d5acb007224909b00d901c 298 Gene3D G3DSA:1.10.10.60 92 161 1.7E-18 T 01-11-2018 CDA09_14750 72750d2e12d5acb007224909b00d901c 298 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 141 164 7.6E-12 T 01-11-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 CDA09_14750 72750d2e12d5acb007224909b00d901c 298 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 120 133 7.6E-12 T 01-11-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 CDA09_01710 e8e5090e1c1cb319862e2b663bf4de2a 163 Pfam PF01883 Iron-sulfur cluster assembly protein 5 76 2.1E-14 T 01-11-2018 IPR002744 MIP18 family-like CDA09_01710 e8e5090e1c1cb319862e2b663bf4de2a 163 Gene3D G3DSA:3.30.300.130 2 98 2.0E-24 T 01-11-2018 IPR034904 Fe-S cluster assembly domain superfamily CDA09_01710 e8e5090e1c1cb319862e2b663bf4de2a 163 SUPERFAMILY SSF117916 1 97 7.85E-24 T 01-11-2018 IPR034904 Fe-S cluster assembly domain superfamily CDA09_01710 e8e5090e1c1cb319862e2b663bf4de2a 163 TIGRFAM TIGR02159 PA_CoA_Oxy4: phenylacetate-CoA oxygenase, PaaJ subunit 14 163 9.1E-70 T 01-11-2018 IPR011883 Phenylacetate-CoA oxygenase, PaaJ subunit CDA09_16805 8358e847f68aacb9c39644e5be410211 248 SUPERFAMILY SSF51206 21 158 4.71E-26 T 01-11-2018 IPR018490 Cyclic nucleotide-binding-like CDA09_16805 8358e847f68aacb9c39644e5be410211 248 Pfam PF00027 Cyclic nucleotide-binding domain 45 128 1.5E-14 T 01-11-2018 IPR000595 Cyclic nucleotide-binding domain CDA09_16805 8358e847f68aacb9c39644e5be410211 248 Gene3D G3DSA:2.60.120.10 39 159 8.1E-39 T 01-11-2018 IPR014710 RmlC-like jelly roll fold CDA09_16805 8358e847f68aacb9c39644e5be410211 248 PRINTS PR00034 CRP bacterial regulatory protein HTH signature 189 205 6.5E-11 T 01-11-2018 IPR012318 Crp-type HTH domain GO:0003677|GO:0006355 CDA09_16805 8358e847f68aacb9c39644e5be410211 248 PRINTS PR00034 CRP bacterial regulatory protein HTH signature 205 220 6.5E-11 T 01-11-2018 IPR012318 Crp-type HTH domain GO:0003677|GO:0006355 CDA09_16805 8358e847f68aacb9c39644e5be410211 248 SMART SM00419 183 231 5.7E-16 T 01-11-2018 IPR012318 Crp-type HTH domain GO:0003677|GO:0006355 CDA09_16805 8358e847f68aacb9c39644e5be410211 248 Gene3D G3DSA:1.10.10.10 161 242 1.3E-27 T 01-11-2018 IPR036388 Winged helix-like DNA-binding domain superfamily CDA09_16805 8358e847f68aacb9c39644e5be410211 248 Pfam PF13545 Crp-like helix-turn-helix domain 164 238 2.9E-20 T 01-11-2018 IPR012318 Crp-type HTH domain GO:0003677|GO:0006355 CDA09_16805 8358e847f68aacb9c39644e5be410211 248 SUPERFAMILY SSF46785 162 241 8.71E-22 T 01-11-2018 IPR036390 Winged helix DNA-binding domain superfamily CDA09_16805 8358e847f68aacb9c39644e5be410211 248 SMART SM00100 26 144 3.1E-9 T 01-11-2018 IPR000595 Cyclic nucleotide-binding domain CDA09_08340 5c44a780dcac15badfa7a33c047cf3df 547 ProSitePatterns PS00688 Sigma-54 interaction domain C-terminal part signature. 416 425 - T 01-11-2018 IPR025944 Sigma-54 interaction domain, conserved site CDA09_08340 5c44a780dcac15badfa7a33c047cf3df 547 Gene3D G3DSA:1.10.10.60 489 547 1.1E-7 T 01-11-2018 CDA09_08340 5c44a780dcac15badfa7a33c047cf3df 547 Gene3D G3DSA:1.10.8.60 375 450 7.9E-24 T 01-11-2018 CDA09_08340 5c44a780dcac15badfa7a33c047cf3df 547 SUPERFAMILY SSF55781 12 168 3.27E-20 T 01-11-2018 CDA09_08340 5c44a780dcac15badfa7a33c047cf3df 547 TIGRFAM TIGR01817 nifA: Nif-specific regulatory protein 12 547 5.6E-209 T 01-11-2018 IPR010113 Nif-specific regulatory protein GO:0003700|GO:0006355|GO:0009399 CDA09_08340 5c44a780dcac15badfa7a33c047cf3df 547 SMART SM00382 224 367 1.3E-11 T 01-11-2018 IPR003593 AAA+ ATPase domain CDA09_08340 5c44a780dcac15badfa7a33c047cf3df 547 PRINTS PR01590 FIS bacterial regulatory protein HTH signature 506 523 1.6E-9 T 01-11-2018 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 CDA09_08340 5c44a780dcac15badfa7a33c047cf3df 547 PRINTS PR01590 FIS bacterial regulatory protein HTH signature 523 543 1.6E-9 T 01-11-2018 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 CDA09_08340 5c44a780dcac15badfa7a33c047cf3df 547 Gene3D G3DSA:3.30.450.40 9 182 1.1E-36 T 01-11-2018 IPR029016 GAF-like domain superfamily CDA09_08340 5c44a780dcac15badfa7a33c047cf3df 547 Gene3D G3DSA:3.40.50.300 189 374 2.8E-68 T 01-11-2018 CDA09_08340 5c44a780dcac15badfa7a33c047cf3df 547 SUPERFAMILY SSF52540 202 444 9.18E-71 T 01-11-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CDA09_08340 5c44a780dcac15badfa7a33c047cf3df 547 Pfam PF00158 Sigma-54 interaction domain 204 370 1.5E-71 T 01-11-2018 IPR002078 RNA polymerase sigma factor 54 interaction domain GO:0005524|GO:0006355|GO:0008134 CDA09_08340 5c44a780dcac15badfa7a33c047cf3df 547 ProSitePatterns PS00676 Sigma-54 interaction domain ATP-binding region B signature. 290 305 - T 01-11-2018 IPR025943 Sigma-54 interaction domain, ATP-binding site 2 CDA09_08340 5c44a780dcac15badfa7a33c047cf3df 547 SMART SM00065 29 180 6.1E-17 T 01-11-2018 IPR003018 GAF domain GO:0005515 CDA09_08340 5c44a780dcac15badfa7a33c047cf3df 547 ProSitePatterns PS00675 Sigma-54 interaction domain ATP-binding region A signature. 228 241 - T 01-11-2018 IPR025662 Sigma-54 interaction domain, ATP-binding site 1 CDA09_08340 5c44a780dcac15badfa7a33c047cf3df 547 Pfam PF02954 Bacterial regulatory protein, Fis family 504 539 1.7E-12 T 01-11-2018 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 CDA09_08340 5c44a780dcac15badfa7a33c047cf3df 547 Pfam PF13185 GAF domain 32 168 4.6E-14 T 01-11-2018 IPR003018 GAF domain GO:0005515 CDA09_05140 68a8b5f6d7986b35e3b33e0b27cd5ed1 482 TIGRFAM TIGR01064 pyruv_kin: pyruvate kinase 3 471 4.1E-161 T 01-11-2018 IPR001697 Pyruvate kinase GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 CDA09_05140 68a8b5f6d7986b35e3b33e0b27cd5ed1 482 ProSitePatterns PS00110 Pyruvate kinase active site signature. 213 225 - T 01-11-2018 IPR018209 Pyruvate kinase, active site GO:0004743|GO:0006096 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 CDA09_05140 68a8b5f6d7986b35e3b33e0b27cd5ed1 482 Gene3D G3DSA:3.40.1380.20 334 467 3.4E-163 T 01-11-2018 IPR036918 Pyruvate kinase, C-terminal domain superfamily KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 CDA09_05140 68a8b5f6d7986b35e3b33e0b27cd5ed1 482 PRINTS PR01050 Pyruvate kinase family signature 292 310 1.7E-60 T 01-11-2018 IPR001697 Pyruvate kinase GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 CDA09_05140 68a8b5f6d7986b35e3b33e0b27cd5ed1 482 PRINTS PR01050 Pyruvate kinase family signature 60 76 1.7E-60 T 01-11-2018 IPR001697 Pyruvate kinase GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 CDA09_05140 68a8b5f6d7986b35e3b33e0b27cd5ed1 482 PRINTS PR01050 Pyruvate kinase family signature 311 327 1.7E-60 T 01-11-2018 IPR001697 Pyruvate kinase GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 CDA09_05140 68a8b5f6d7986b35e3b33e0b27cd5ed1 482 PRINTS PR01050 Pyruvate kinase family signature 242 266 1.7E-60 T 01-11-2018 IPR001697 Pyruvate kinase GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 CDA09_05140 68a8b5f6d7986b35e3b33e0b27cd5ed1 482 PRINTS PR01050 Pyruvate kinase family signature 185 199 1.7E-60 T 01-11-2018 IPR001697 Pyruvate kinase GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 CDA09_05140 68a8b5f6d7986b35e3b33e0b27cd5ed1 482 PRINTS PR01050 Pyruvate kinase family signature 215 241 1.7E-60 T 01-11-2018 IPR001697 Pyruvate kinase GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 CDA09_05140 68a8b5f6d7986b35e3b33e0b27cd5ed1 482 PRINTS PR01050 Pyruvate kinase family signature 267 291 1.7E-60 T 01-11-2018 IPR001697 Pyruvate kinase GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 CDA09_05140 68a8b5f6d7986b35e3b33e0b27cd5ed1 482 Pfam PF00224 Pyruvate kinase, barrel domain 3 336 8.0E-122 T 01-11-2018 IPR015793 Pyruvate kinase, barrel GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 CDA09_05140 68a8b5f6d7986b35e3b33e0b27cd5ed1 482 SUPERFAMILY SSF50800 71 163 7.15E-25 T 01-11-2018 IPR011037 Pyruvate kinase-like, insert domain superfamily CDA09_05140 68a8b5f6d7986b35e3b33e0b27cd5ed1 482 SUPERFAMILY SSF52935 321 472 1.27E-37 T 01-11-2018 IPR036918 Pyruvate kinase, C-terminal domain superfamily KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 CDA09_05140 68a8b5f6d7986b35e3b33e0b27cd5ed1 482 Pfam PF02887 Pyruvate kinase, alpha/beta domain 356 469 8.3E-29 T 01-11-2018 IPR015795 Pyruvate kinase, C-terminal KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 CDA09_05140 68a8b5f6d7986b35e3b33e0b27cd5ed1 482 Gene3D G3DSA:3.20.20.60 3 333 3.4E-163 T 01-11-2018 CDA09_05140 68a8b5f6d7986b35e3b33e0b27cd5ed1 482 SUPERFAMILY SSF51621 2 336 6.98E-95 T 01-11-2018 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain superfamily GO:0003824 CDA09_05140 68a8b5f6d7986b35e3b33e0b27cd5ed1 482 Gene3D G3DSA:2.40.33.10 71 167 3.4E-163 T 01-11-2018 IPR015806 Pyruvate kinase, insert domain superfamily GO:0004743|GO:0006096 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 CDA09_18580 b86e59c81721b1efb767e808803b2254 79 Pfam PF13711 Domain of unknown function (DUF4160) 11 74 8.7E-15 T 01-11-2018 IPR025427 Protein of unknown function DUF4160 CDA09_05375 84ceb50c0060192951d5137558a454e0 873 SUPERFAMILY SSF101353 252 451 4.18E-59 T 01-11-2018 IPR018162 Alanine-tRNA ligase, class IIc, anti-codon-binding domain superfamily GO:0000166|GO:0004813|GO:0005524|GO:0005737|GO:0006419 KEGG: 00970+6.1.1.7 CDA09_05375 84ceb50c0060192951d5137558a454e0 873 TIGRFAM TIGR00344 alaS: alanine--tRNA ligase 5 852 0.0 T 01-11-2018 IPR002318 Alanine-tRNA ligase, class IIc GO:0000166|GO:0005737 KEGG: 00970+6.1.1.7 CDA09_05375 84ceb50c0060192951d5137558a454e0 873 SUPERFAMILY SSF55186 551 709 6.28E-49 T 01-11-2018 IPR018163 Threonyl/alanyl tRNA synthetase, class II-like, putative editing domain superfamily GO:0000166 CDA09_05375 84ceb50c0060192951d5137558a454e0 873 Gene3D G3DSA:3.30.980.10 561 695 2.7E-51 T 01-11-2018 CDA09_05375 84ceb50c0060192951d5137558a454e0 873 Pfam PF01411 tRNA synthetases class II (A) 5 553 7.9E-223 T 01-11-2018 IPR018164 Alanyl-tRNA synthetase, class IIc, N-terminal GO:0000166|GO:0004813|GO:0005524|GO:0006419 KEGG: 00970+6.1.1.7 CDA09_05375 84ceb50c0060192951d5137558a454e0 873 Pfam PF07973 Threonyl and Alanyl tRNA synthetase second additional domain 652 694 1.8E-16 T 01-11-2018 IPR012947 Threonyl/alanyl tRNA synthetase, SAD GO:0004812|GO:0005524|GO:0043039 CDA09_05375 84ceb50c0060192951d5137558a454e0 873 Gene3D G3DSA:2.40.30.130 466 551 3.9E-9 T 01-11-2018 CDA09_05375 84ceb50c0060192951d5137558a454e0 873 Gene3D G3DSA:3.30.54.20 623 675 2.7E-51 T 01-11-2018 CDA09_05375 84ceb50c0060192951d5137558a454e0 873 Hamap MF_00036_B Alanine--tRNA ligase [alaS]. 1 873 204.898 T 01-11-2018 IPR023033 Alanine-tRNA ligase, eukaryota/bacteria GO:0004813 KEGG: 00970+6.1.1.7 CDA09_05375 84ceb50c0060192951d5137558a454e0 873 SUPERFAMILY SSF50447 453 551 1.45E-17 T 01-11-2018 IPR009000 Translation protein, beta-barrel domain superfamily CDA09_05375 84ceb50c0060192951d5137558a454e0 873 Gene3D G3DSA:3.30.930.10 1 248 9.3E-122 T 01-11-2018 CDA09_05375 84ceb50c0060192951d5137558a454e0 873 SUPERFAMILY SSF55681 2 251 1.57E-109 T 01-11-2018 CDA09_05375 84ceb50c0060192951d5137558a454e0 873 PRINTS PR00980 Alanyl-tRNA synthetase signature 205 216 8.0E-32 T 01-11-2018 IPR002318 Alanine-tRNA ligase, class IIc GO:0000166|GO:0005737 KEGG: 00970+6.1.1.7 CDA09_05375 84ceb50c0060192951d5137558a454e0 873 PRINTS PR00980 Alanyl-tRNA synthetase signature 278 294 8.0E-32 T 01-11-2018 IPR002318 Alanine-tRNA ligase, class IIc GO:0000166|GO:0005737 KEGG: 00970+6.1.1.7 CDA09_05375 84ceb50c0060192951d5137558a454e0 873 PRINTS PR00980 Alanyl-tRNA synthetase signature 302 315 8.0E-32 T 01-11-2018 IPR002318 Alanine-tRNA ligase, class IIc GO:0000166|GO:0005737 KEGG: 00970+6.1.1.7 CDA09_05375 84ceb50c0060192951d5137558a454e0 873 PRINTS PR00980 Alanyl-tRNA synthetase signature 74 85 8.0E-32 T 01-11-2018 IPR002318 Alanine-tRNA ligase, class IIc GO:0000166|GO:0005737 KEGG: 00970+6.1.1.7 CDA09_05375 84ceb50c0060192951d5137558a454e0 873 PRINTS PR00980 Alanyl-tRNA synthetase signature 232 245 8.0E-32 T 01-11-2018 IPR002318 Alanine-tRNA ligase, class IIc GO:0000166|GO:0005737 KEGG: 00970+6.1.1.7 CDA09_05375 84ceb50c0060192951d5137558a454e0 873 SMART SM00863 652 694 1.4E-19 T 01-11-2018 IPR012947 Threonyl/alanyl tRNA synthetase, SAD GO:0004812|GO:0005524|GO:0043039 CDA09_05375 84ceb50c0060192951d5137558a454e0 873 Gene3D G3DSA:3.10.310.40 762 871 6.9E-32 T 01-11-2018 CDA09_05375 84ceb50c0060192951d5137558a454e0 873 Pfam PF02272 DHHA1 domain 731 869 8.2E-29 T 01-11-2018 IPR003156 DHHA1 domain GO:0003676 KEGG: 00970+6.1.1.7|Reactome: R-HSA-379716 CDA09_17905 98a1c64cc3c10a448e4286c4fb991ce4 256 SMART SM00382 29 237 8.2E-6 T 01-11-2018 IPR003593 AAA+ ATPase domain CDA09_17905 98a1c64cc3c10a448e4286c4fb991ce4 256 ProSitePatterns PS00211 ABC transporters family signature. 153 167 - T 01-11-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 CDA09_17905 98a1c64cc3c10a448e4286c4fb991ce4 256 Pfam PF12399 Branched-chain amino acid ATP-binding cassette transporter 229 251 7.1E-9 T 01-11-2018 IPR032823 Branched-chain amino acid ATP-binding cassette transporter, C-terminal CDA09_17905 98a1c64cc3c10a448e4286c4fb991ce4 256 Pfam PF00005 ABC transporter 20 180 2.6E-29 T 01-11-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 CDA09_17905 98a1c64cc3c10a448e4286c4fb991ce4 256 Gene3D G3DSA:3.40.50.300 1 252 3.6E-59 T 01-11-2018 CDA09_17905 98a1c64cc3c10a448e4286c4fb991ce4 256 SUPERFAMILY SSF52540 4 251 1.74E-60 T 01-11-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CDA09_04440 0cb532902980e294697838e3ea1153ad 442 Gene3D G3DSA:3.30.300.20 352 434 2.7E-17 T 01-11-2018 IPR015946 K homology domain-like, alpha/beta CDA09_04440 0cb532902980e294697838e3ea1153ad 442 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 5 25 8.4E-8 T 01-11-2018 IPR006073 GTP binding domain GO:0005525 CDA09_04440 0cb532902980e294697838e3ea1153ad 442 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 73 91 8.4E-8 T 01-11-2018 IPR006073 GTP binding domain GO:0005525 CDA09_04440 0cb532902980e294697838e3ea1153ad 442 TIGRFAM TIGR03594 GTPase_EngA: ribosome-associated GTPase EngA 3 432 8.3E-169 T 01-11-2018 IPR016484 GTP-binding protein EngA GO:0005525 CDA09_04440 0cb532902980e294697838e3ea1153ad 442 Pfam PF14714 KH-domain-like of EngA bacterial GTPase enzymes, C-terminal 353 432 1.4E-22 T 01-11-2018 IPR032859 GTPase Der, C-terminal KH-domain-like CDA09_04440 0cb532902980e294697838e3ea1153ad 442 Gene3D G3DSA:3.40.50.300 4 164 1.4E-41 T 01-11-2018 CDA09_04440 0cb532902980e294697838e3ea1153ad 442 SUPERFAMILY SSF52540 3 163 1.86E-44 T 01-11-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CDA09_04440 0cb532902980e294697838e3ea1153ad 442 SUPERFAMILY SSF52540 138 438 1.11E-59 T 01-11-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CDA09_04440 0cb532902980e294697838e3ea1153ad 442 Gene3D G3DSA:3.40.50.300 172 346 6.1E-48 T 01-11-2018 CDA09_04440 0cb532902980e294697838e3ea1153ad 442 PIRSF PIRSF006485 1 440 1.2E-167 T 01-11-2018 IPR016484 GTP-binding protein EngA GO:0005525 CDA09_04440 0cb532902980e294697838e3ea1153ad 442 Pfam PF01926 50S ribosome-binding GTPase 5 120 6.1E-26 T 01-11-2018 IPR006073 GTP binding domain GO:0005525 CDA09_04440 0cb532902980e294697838e3ea1153ad 442 Pfam PF01926 50S ribosome-binding GTPase 178 296 1.4E-24 T 01-11-2018 IPR006073 GTP binding domain GO:0005525 CDA09_04440 0cb532902980e294697838e3ea1153ad 442 Hamap MF_00195 GTPase Der [der]. 2 435 37.003 T 01-11-2018 IPR016484 GTP-binding protein EngA GO:0005525 CDA09_04440 0cb532902980e294697838e3ea1153ad 442 SMART SM00382 1 142 4.4 T 01-11-2018 IPR003593 AAA+ ATPase domain CDA09_04440 0cb532902980e294697838e3ea1153ad 442 SMART SM00382 175 318 8.0E-5 T 01-11-2018 IPR003593 AAA+ ATPase domain CDA09_04440 0cb532902980e294697838e3ea1153ad 442 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 4 158 4.8E-19 T 01-11-2018 IPR005225 Small GTP-binding protein domain GO:0005525 CDA09_04440 0cb532902980e294697838e3ea1153ad 442 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 177 342 7.3E-27 T 01-11-2018 IPR005225 Small GTP-binding protein domain GO:0005525 CDA09_01740 fb264adc55db9e2f171ee52e849c98fa 263 Gene3D G3DSA:3.40.50.300 16 254 6.5E-57 T 01-11-2018 CDA09_01740 fb264adc55db9e2f171ee52e849c98fa 263 SUPERFAMILY SSF52540 19 251 5.21E-55 T 01-11-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CDA09_01740 fb264adc55db9e2f171ee52e849c98fa 263 Pfam PF00005 ABC transporter 35 181 1.1E-25 T 01-11-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 CDA09_01740 fb264adc55db9e2f171ee52e849c98fa 263 SMART SM00382 44 230 2.9E-8 T 01-11-2018 IPR003593 AAA+ ATPase domain CDA09_01740 fb264adc55db9e2f171ee52e849c98fa 263 ProSitePatterns PS00211 ABC transporters family signature. 154 168 - T 01-11-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 CDA09_14735 fb264adc55db9e2f171ee52e849c98fa 263 Gene3D G3DSA:3.40.50.300 16 254 6.5E-57 T 01-11-2018 CDA09_14735 fb264adc55db9e2f171ee52e849c98fa 263 SUPERFAMILY SSF52540 19 251 5.21E-55 T 01-11-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CDA09_14735 fb264adc55db9e2f171ee52e849c98fa 263 Pfam PF00005 ABC transporter 35 181 1.1E-25 T 01-11-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 CDA09_14735 fb264adc55db9e2f171ee52e849c98fa 263 SMART SM00382 44 230 2.9E-8 T 01-11-2018 IPR003593 AAA+ ATPase domain CDA09_14735 fb264adc55db9e2f171ee52e849c98fa 263 ProSitePatterns PS00211 ABC transporters family signature. 154 168 - T 01-11-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 CDA09_07330 ad4347776b288753d8f14ada06c62142 603 Pfam PF00425 chorismate binding enzyme 132 378 3.1E-78 T 01-11-2018 IPR015890 Chorismate-utilising enzyme, C-terminal CDA09_07330 ad4347776b288753d8f14ada06c62142 603 Gene3D G3DSA:3.20.10.10 467 595 9.4E-35 T 01-11-2018 CDA09_07330 ad4347776b288753d8f14ada06c62142 603 Pfam PF01063 Amino-transferase class IV 390 592 2.6E-35 T 01-11-2018 IPR001544 Aminotransferase class IV GO:0003824 Reactome: R-HSA-70895 CDA09_07330 ad4347776b288753d8f14ada06c62142 603 SUPERFAMILY SSF56752 333 593 6.41E-43 T 01-11-2018 IPR036038 Aminotransferase-like, PLP-dependent enzymes GO:0003824 Reactome: R-HSA-70895 CDA09_07330 ad4347776b288753d8f14ada06c62142 603 ProSitePatterns PS00770 Aminotransferases class-IV signature. 525 555 - T 01-11-2018 IPR018300 Aminotransferase, class IV, conserved site GO:0003824 Reactome: R-HSA-70895 CDA09_07330 ad4347776b288753d8f14ada06c62142 603 TIGRFAM TIGR00553 pabB: aminodeoxychorismate synthase, component I 60 382 1.0E-102 T 01-11-2018 IPR005802 Para-aminobenzoate synthase, component I GO:0009396 KEGG: 00790+2.6.1.85|MetaCyc: PWY-6543 CDA09_07330 ad4347776b288753d8f14ada06c62142 603 Gene3D G3DSA:3.30.470.10 381 463 6.9E-20 T 01-11-2018 CDA09_07330 ad4347776b288753d8f14ada06c62142 603 Gene3D G3DSA:3.60.120.10 27 380 2.2E-102 T 01-11-2018 IPR005801 ADC synthase GO:0009058 CDA09_07330 ad4347776b288753d8f14ada06c62142 603 PRINTS PR00095 Anthranilate synthase component I signature 226 239 2.0E-12 T 01-11-2018 IPR019999 Anthranilate synthase component I-like GO:0009058 KEGG: 00400+4.1.3.27|KEGG: 00405+4.1.3.27|MetaCyc: PWY-5958|MetaCyc: PWY-6660|MetaCyc: PWY-6661 CDA09_07330 ad4347776b288753d8f14ada06c62142 603 PRINTS PR00095 Anthranilate synthase component I signature 240 253 2.0E-12 T 01-11-2018 IPR019999 Anthranilate synthase component I-like GO:0009058 KEGG: 00400+4.1.3.27|KEGG: 00405+4.1.3.27|MetaCyc: PWY-5958|MetaCyc: PWY-6660|MetaCyc: PWY-6661 CDA09_07330 ad4347776b288753d8f14ada06c62142 603 PRINTS PR00095 Anthranilate synthase component I signature 334 348 2.0E-12 T 01-11-2018 IPR019999 Anthranilate synthase component I-like GO:0009058 KEGG: 00400+4.1.3.27|KEGG: 00405+4.1.3.27|MetaCyc: PWY-5958|MetaCyc: PWY-6660|MetaCyc: PWY-6661 CDA09_07330 ad4347776b288753d8f14ada06c62142 603 PRINTS PR00095 Anthranilate synthase component I signature 319 333 2.0E-12 T 01-11-2018 IPR019999 Anthranilate synthase component I-like GO:0009058 KEGG: 00400+4.1.3.27|KEGG: 00405+4.1.3.27|MetaCyc: PWY-5958|MetaCyc: PWY-6660|MetaCyc: PWY-6661 CDA09_07330 ad4347776b288753d8f14ada06c62142 603 SUPERFAMILY SSF56322 36 384 6.41E-96 T 01-11-2018 IPR005801 ADC synthase GO:0009058 CDA09_19905 82bcec7da8cc96d603d8a4d2ec3f6cc4 664 Pfam PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain 115 323 1.3E-78 T 01-11-2018 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 CDA09_19905 82bcec7da8cc96d603d8a4d2ec3f6cc4 664 SUPERFAMILY SSF51246 332 448 9.42E-43 T 01-11-2018 IPR011054 Rudiment single hybrid motif Reactome: R-HSA-196780 CDA09_19905 82bcec7da8cc96d603d8a4d2ec3f6cc4 664 SMART SM00878 337 445 4.9E-64 T 01-11-2018 IPR005482 Biotin carboxylase, C-terminal Reactome: R-HSA-196780|Reactome: R-HSA-3371599 CDA09_19905 82bcec7da8cc96d603d8a4d2ec3f6cc4 664 ProSitePatterns PS00188 Biotin-requiring enzymes attachment site. 620 637 - T 01-11-2018 IPR001882 Biotin-binding site Reactome: R-HSA-196780|Reactome: R-HSA-3371599 CDA09_19905 82bcec7da8cc96d603d8a4d2ec3f6cc4 664 Pfam PF00289 Biotin carboxylase, N-terminal domain 1 107 4.5E-45 T 01-11-2018 IPR005481 Biotin carboxylase-like, N-terminal domain Reactome: R-HSA-196780|Reactome: R-HSA-3371599 CDA09_19905 82bcec7da8cc96d603d8a4d2ec3f6cc4 664 SUPERFAMILY SSF51230 586 664 4.58E-19 T 01-11-2018 IPR011053 Single hybrid motif CDA09_19905 82bcec7da8cc96d603d8a4d2ec3f6cc4 664 SUPERFAMILY SSF52440 1 112 1.8E-47 T 01-11-2018 IPR016185 Pre-ATP-grasp domain superfamily CDA09_19905 82bcec7da8cc96d603d8a4d2ec3f6cc4 664 Gene3D G3DSA:3.30.470.130 1 450 3.3E-200 T 01-11-2018 CDA09_19905 82bcec7da8cc96d603d8a4d2ec3f6cc4 664 ProSitePatterns PS00867 Carbamoyl-phosphate synthase subdomain signature 2. 287 294 - T 01-11-2018 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 CDA09_19905 82bcec7da8cc96d603d8a4d2ec3f6cc4 664 ProSitePatterns PS00866 Carbamoyl-phosphate synthase subdomain signature 1. 153 167 - T 01-11-2018 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 CDA09_19905 82bcec7da8cc96d603d8a4d2ec3f6cc4 664 Gene3D G3DSA:2.40.50.100 597 664 2.0E-20 T 01-11-2018 CDA09_19905 82bcec7da8cc96d603d8a4d2ec3f6cc4 664 Gene3D G3DSA:3.30.700.30 452 584 3.0E-29 T 01-11-2018 CDA09_19905 82bcec7da8cc96d603d8a4d2ec3f6cc4 664 SUPERFAMILY SSF56059 83 349 1.17E-67 T 01-11-2018 CDA09_19905 82bcec7da8cc96d603d8a4d2ec3f6cc4 664 Pfam PF00364 Biotin-requiring enzyme 600 662 1.9E-15 T 01-11-2018 IPR000089 Biotin/lipoyl attachment CDA09_19905 82bcec7da8cc96d603d8a4d2ec3f6cc4 664 TIGRFAM TIGR00514 accC: acetyl-CoA carboxylase, biotin carboxylase subunit 1 446 3.4E-191 T 01-11-2018 IPR004549 Acetyl-CoA carboxylase, biotin carboxylase GO:0016874 CDA09_19905 82bcec7da8cc96d603d8a4d2ec3f6cc4 664 Pfam PF02785 Biotin carboxylase C-terminal domain 337 445 2.2E-39 T 01-11-2018 IPR005482 Biotin carboxylase, C-terminal Reactome: R-HSA-196780|Reactome: R-HSA-3371599 CDA09_14530 2c8968deaeab4f5c11fc3188ebf86e8d 271 Gene3D G3DSA:3.40.50.300 1 260 6.6E-69 T 01-11-2018 CDA09_14530 2c8968deaeab4f5c11fc3188ebf86e8d 271 SUPERFAMILY SSF52540 2 269 3.87E-50 T 01-11-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CDA09_14530 2c8968deaeab4f5c11fc3188ebf86e8d 271 PIRSF PIRSF003092 1 271 8.0E-90 T 01-11-2018 IPR025501 ATP binding protein MinD CDA09_14530 2c8968deaeab4f5c11fc3188ebf86e8d 271 TIGRFAM TIGR01968 minD_bact: septum site-determining protein MinD 3 268 1.3E-102 T 01-11-2018 IPR010223 ATP binding protein MinD, bacterial-type GO:0016887 CDA09_14530 2c8968deaeab4f5c11fc3188ebf86e8d 271 Pfam PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain 5 226 2.9E-19 T 01-11-2018 IPR002586 CobQ/CobB/MinD/ParA nucleotide binding domain CDA09_07950 caa047f2e03c4f21aec19988067332be 330 Pfam PF09084 NMT1/THI5 like 50 248 1.9E-10 T 01-11-2018 IPR015168 SsuA/THI5-like CDA09_07950 caa047f2e03c4f21aec19988067332be 330 SUPERFAMILY SSF53850 28 250 2.11E-27 T 01-11-2018 CDA09_07950 caa047f2e03c4f21aec19988067332be 330 Gene3D G3DSA:3.40.190.10 49 294 1.4E-21 T 01-11-2018 CDA09_07950 caa047f2e03c4f21aec19988067332be 330 Gene3D G3DSA:3.40.190.10 110 218 1.4E-21 T 01-11-2018 CDA09_08560 bd37989f02e3098571c9c43ac4d4e716 385 SUPERFAMILY SSF53850 48 381 7.41E-53 T 01-11-2018 CDA09_08560 bd37989f02e3098571c9c43ac4d4e716 385 Gene3D G3DSA:3.40.190.10 53 331 2.0E-46 T 01-11-2018 CDA09_08560 bd37989f02e3098571c9c43ac4d4e716 385 PRINTS PR00909 Bacterial periplasmic spermidine/putrescine-binding protein signature 113 126 8.8E-10 T 01-11-2018 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 CDA09_08560 bd37989f02e3098571c9c43ac4d4e716 385 PRINTS PR00909 Bacterial periplasmic spermidine/putrescine-binding protein signature 145 161 8.8E-10 T 01-11-2018 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 CDA09_08560 bd37989f02e3098571c9c43ac4d4e716 385 PRINTS PR00909 Bacterial periplasmic spermidine/putrescine-binding protein signature 273 292 8.8E-10 T 01-11-2018 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 CDA09_08560 bd37989f02e3098571c9c43ac4d4e716 385 PRINTS PR00909 Bacterial periplasmic spermidine/putrescine-binding protein signature 97 111 8.8E-10 T 01-11-2018 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 CDA09_08560 bd37989f02e3098571c9c43ac4d4e716 385 PRINTS PR00909 Bacterial periplasmic spermidine/putrescine-binding protein signature 171 185 8.8E-10 T 01-11-2018 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 CDA09_08560 bd37989f02e3098571c9c43ac4d4e716 385 PRINTS PR00909 Bacterial periplasmic spermidine/putrescine-binding protein signature 53 69 8.8E-10 T 01-11-2018 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 CDA09_08560 bd37989f02e3098571c9c43ac4d4e716 385 Pfam PF13416 Bacterial extracellular solute-binding protein 63 330 4.2E-28 T 01-11-2018 IPR006059 Bacterial extracellular solute-binding protein CDA09_08560 bd37989f02e3098571c9c43ac4d4e716 385 Gene3D G3DSA:3.40.190.10 154 280 2.0E-46 T 01-11-2018 CDA09_18125 82e0a5b8c7b5d78755d854e2bd5a604a 528 SMART SM00387 397 521 6.8E-27 T 01-11-2018 IPR003594 Histidine kinase/HSP90-like ATPase CDA09_18125 82e0a5b8c7b5d78755d854e2bd5a604a 528 SUPERFAMILY SSF47384 282 352 2.16E-9 T 01-11-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 CDA09_18125 82e0a5b8c7b5d78755d854e2bd5a604a 528 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 398 519 4.1E-18 T 01-11-2018 IPR003594 Histidine kinase/HSP90-like ATPase CDA09_18125 82e0a5b8c7b5d78755d854e2bd5a604a 528 PRINTS PR00344 Bacterial sensor protein C-terminal signature 450 464 2.7E-16 T 01-11-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 CDA09_18125 82e0a5b8c7b5d78755d854e2bd5a604a 528 PRINTS PR00344 Bacterial sensor protein C-terminal signature 468 478 2.7E-16 T 01-11-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 CDA09_18125 82e0a5b8c7b5d78755d854e2bd5a604a 528 PRINTS PR00344 Bacterial sensor protein C-terminal signature 505 518 2.7E-16 T 01-11-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 CDA09_18125 82e0a5b8c7b5d78755d854e2bd5a604a 528 PRINTS PR00344 Bacterial sensor protein C-terminal signature 481 499 2.7E-16 T 01-11-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 CDA09_18125 82e0a5b8c7b5d78755d854e2bd5a604a 528 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 152 271 5.2E-21 T 01-11-2018 IPR000014 PAS domain CDA09_18125 82e0a5b8c7b5d78755d854e2bd5a604a 528 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 19 143 1.5E-10 T 01-11-2018 IPR000014 PAS domain CDA09_18125 82e0a5b8c7b5d78755d854e2bd5a604a 528 Pfam PF08448 PAS fold 23 134 1.6E-8 T 01-11-2018 IPR013656 PAS fold-4 CDA09_18125 82e0a5b8c7b5d78755d854e2bd5a604a 528 SMART SM00388 287 356 3.0E-5 T 01-11-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 CDA09_18125 82e0a5b8c7b5d78755d854e2bd5a604a 528 Pfam PF00512 His Kinase A (phospho-acceptor) domain 291 353 3.9E-8 T 01-11-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 CDA09_18125 82e0a5b8c7b5d78755d854e2bd5a604a 528 Gene3D G3DSA:1.10.287.130 285 353 1.1E-16 T 01-11-2018 CDA09_18125 82e0a5b8c7b5d78755d854e2bd5a604a 528 SMART SM00091 15 84 0.011 T 01-11-2018 IPR000014 PAS domain CDA09_18125 82e0a5b8c7b5d78755d854e2bd5a604a 528 SMART SM00091 151 217 1.0E-6 T 01-11-2018 IPR000014 PAS domain CDA09_18125 82e0a5b8c7b5d78755d854e2bd5a604a 528 Gene3D G3DSA:3.30.450.20 149 284 2.6E-34 T 01-11-2018 CDA09_18125 82e0a5b8c7b5d78755d854e2bd5a604a 528 SMART SM00086 93 136 26.0 T 01-11-2018 IPR001610 PAC motif CDA09_18125 82e0a5b8c7b5d78755d854e2bd5a604a 528 SMART SM00086 223 265 5.5E-6 T 01-11-2018 IPR001610 PAC motif CDA09_18125 82e0a5b8c7b5d78755d854e2bd5a604a 528 SUPERFAMILY SSF55785 26 144 2.27E-13 T 01-11-2018 IPR035965 PAS domain superfamily CDA09_18125 82e0a5b8c7b5d78755d854e2bd5a604a 528 Gene3D G3DSA:3.30.565.10 360 523 4.6E-40 T 01-11-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily CDA09_18125 82e0a5b8c7b5d78755d854e2bd5a604a 528 SUPERFAMILY SSF55785 133 263 5.93E-28 T 01-11-2018 IPR035965 PAS domain superfamily CDA09_18125 82e0a5b8c7b5d78755d854e2bd5a604a 528 SUPERFAMILY SSF55874 355 519 1.14E-32 T 01-11-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily CDA09_18125 82e0a5b8c7b5d78755d854e2bd5a604a 528 Pfam PF13426 PAS domain 162 264 5.2E-15 T 01-11-2018 IPR000014 PAS domain CDA09_18125 82e0a5b8c7b5d78755d854e2bd5a604a 528 Gene3D G3DSA:3.30.450.20 22 148 1.5E-18 T 01-11-2018 CDA09_04775 1bf85087bf3372f677e5329745c0f835 288 Pfam PF13557 Putative MetA-pathway of phenol degradation 75 284 4.6E-21 T 01-11-2018 IPR025737 MetA-pathway of phenol degradation, putative CDA09_12100 34e07b3b3e6ba71a156319cfbdf494a6 377 Gene3D G3DSA:3.90.226.10 43 235 4.3E-40 T 01-11-2018 CDA09_12100 34e07b3b3e6ba71a156319cfbdf494a6 377 TIGRFAM TIGR03200 dearomat_oah: 6-oxocyclohex-1-ene-1-carbonyl-CoA hydrolase 13 372 3.1E-198 T 01-11-2018 IPR017613 6-oxocyclohex-1-ene-1-carbonyl-CoA hydrolase KEGG: 00362+3.7.1.21 CDA09_12100 34e07b3b3e6ba71a156319cfbdf494a6 377 SUPERFAMILY SSF52096 51 344 9.3E-46 T 01-11-2018 IPR029045 ClpP/crotonase-like domain superfamily CDA09_12100 34e07b3b3e6ba71a156319cfbdf494a6 377 Pfam PF00378 Enoyl-CoA hydratase/isomerase 52 224 4.8E-34 T 01-11-2018 IPR001753 Enoyl-CoA hydratase/isomerase GO:0003824 CDA09_08365 71a5d49cf2dad5552e25ca518ef8b853 70 Gene3D G3DSA:2.40.50.240 1 67 1.7E-27 T 01-11-2018 IPR024044 NifT/FixU barrel-like domain superfamily CDA09_08365 71a5d49cf2dad5552e25ca518ef8b853 70 SUPERFAMILY SSF159203 1 67 4.05E-22 T 01-11-2018 IPR024044 NifT/FixU barrel-like domain superfamily CDA09_08365 71a5d49cf2dad5552e25ca518ef8b853 70 Pfam PF06988 NifT/FixU protein 1 64 5.1E-26 T 01-11-2018 IPR009727 NifT/FixU GO:0009399 CDA09_08365 71a5d49cf2dad5552e25ca518ef8b853 70 TIGRFAM TIGR02934 nifT_nitrog: probable nitrogen fixation protein FixT 1 67 1.2E-28 T 01-11-2018 IPR009727 NifT/FixU GO:0009399 CDA09_18270 f0c1138fc5cfe5913803c42f84eb228f 452 Gene3D G3DSA:3.40.1190.10 91 312 7.4E-58 T 01-11-2018 IPR036565 Mur-like, catalytic domain superfamily GO:0005524|GO:0009058 Reactome: R-HSA-196757 CDA09_18270 f0c1138fc5cfe5913803c42f84eb228f 452 SUPERFAMILY SSF53244 309 446 3.01E-37 T 01-11-2018 IPR036615 Mur ligase, C-terminal domain superfamily GO:0005524|GO:0009058|GO:0016874 Reactome: R-HSA-196757 CDA09_18270 f0c1138fc5cfe5913803c42f84eb228f 452 Hamap MF_02020 UDP-N-acetylmuramate--L-alanyl-gamma-D-glutamyl-meso-2,6-diaminoheptandioate ligase [mpl]. 1 447 58.854 T 01-11-2018 IPR005757 Murein peptide ligase GO:0009252|GO:0016881|GO:0071555 MetaCyc: PWY-7883 CDA09_18270 f0c1138fc5cfe5913803c42f84eb228f 452 SUPERFAMILY SSF51984 1 90 7.32E-22 T 01-11-2018 CDA09_18270 f0c1138fc5cfe5913803c42f84eb228f 452 Gene3D G3DSA:3.40.50.720 1 90 9.4E-36 T 01-11-2018 CDA09_18270 f0c1138fc5cfe5913803c42f84eb228f 452 Pfam PF02875 Mur ligase family, glutamate ligase domain 310 362 7.9E-10 T 01-11-2018 IPR004101 Mur ligase, C-terminal GO:0005524|GO:0009058|GO:0016874 CDA09_18270 f0c1138fc5cfe5913803c42f84eb228f 452 SUPERFAMILY SSF53623 95 307 6.93E-52 T 01-11-2018 IPR036565 Mur-like, catalytic domain superfamily GO:0005524|GO:0009058 Reactome: R-HSA-196757 CDA09_18270 f0c1138fc5cfe5913803c42f84eb228f 452 TIGRFAM TIGR01081 mpl: UDP-N-acetylmuramate:L-alanyl-gamma-D-glutamyl-meso-diaminopimelate ligase 2 447 2.2E-215 T 01-11-2018 IPR005757 Murein peptide ligase GO:0009252|GO:0016881|GO:0071555 MetaCyc: PWY-7883 CDA09_18270 f0c1138fc5cfe5913803c42f84eb228f 452 Pfam PF08245 Mur ligase middle domain 108 290 5.8E-22 T 01-11-2018 IPR013221 Mur ligase, central GO:0005524|GO:0009058 CDA09_18270 f0c1138fc5cfe5913803c42f84eb228f 452 Pfam PF01225 Mur ligase family, catalytic domain 2 100 3.8E-19 T 01-11-2018 IPR000713 Mur ligase, N-terminal catalytic domain GO:0005524|GO:0009058 CDA09_18270 f0c1138fc5cfe5913803c42f84eb228f 452 Gene3D G3DSA:3.90.190.20 313 448 1.5E-27 T 01-11-2018 IPR036615 Mur ligase, C-terminal domain superfamily GO:0005524|GO:0009058|GO:0016874 Reactome: R-HSA-196757 CDA09_13685 af554e2ca15b19119c0464ddd20c5ca1 262 SUPERFAMILY SSF55781 96 261 1.63E-27 T 01-11-2018 CDA09_13685 af554e2ca15b19119c0464ddd20c5ca1 262 Gene3D G3DSA:3.30.450.40 92 261 1.4E-27 T 01-11-2018 IPR029016 GAF-like domain superfamily CDA09_13685 af554e2ca15b19119c0464ddd20c5ca1 262 SUPERFAMILY SSF46785 20 86 5.4E-11 T 01-11-2018 IPR036390 Winged helix DNA-binding domain superfamily CDA09_13685 af554e2ca15b19119c0464ddd20c5ca1 262 Pfam PF09339 IclR helix-turn-helix domain 22 72 6.1E-9 T 01-11-2018 IPR005471 Transcription regulator IclR, N-terminal GO:0003677|GO:0006355 CDA09_13685 af554e2ca15b19119c0464ddd20c5ca1 262 Pfam PF01614 Bacterial transcriptional regulator 138 259 4.9E-13 T 01-11-2018 IPR014757 Transcription regulator IclR, C-terminal CDA09_13685 af554e2ca15b19119c0464ddd20c5ca1 262 Gene3D G3DSA:1.10.10.10 15 86 3.6E-14 T 01-11-2018 IPR036388 Winged helix-like DNA-binding domain superfamily CDA09_13685 af554e2ca15b19119c0464ddd20c5ca1 262 SMART SM00346 19 109 0.0042 T 01-11-2018 IPR005471 Transcription regulator IclR, N-terminal GO:0003677|GO:0006355 CDA09_12710 dee61c27b2f66e49ba2a8e8eab3eac65 230 SUPERFAMILY SSF53067 1 101 5.18E-24 T 01-11-2018 CDA09_12710 dee61c27b2f66e49ba2a8e8eab3eac65 230 Gene3D G3DSA:3.30.420.40 94 182 1.5E-58 T 01-11-2018 CDA09_12710 dee61c27b2f66e49ba2a8e8eab3eac65 230 Gene3D G3DSA:3.30.420.40 3 213 1.5E-58 T 01-11-2018 CDA09_12710 dee61c27b2f66e49ba2a8e8eab3eac65 230 Pfam PF00814 Glycoprotease family 31 138 7.8E-23 T 01-11-2018 IPR000905 Gcp-like domain CDA09_12710 dee61c27b2f66e49ba2a8e8eab3eac65 230 TIGRFAM TIGR03725 T6A_YeaZ: tRNA threonylcarbamoyl adenosine modification protein YeaZ 3 213 4.3E-50 T 01-11-2018 IPR022496 tRNA threonylcarbamoyl adenosine modification protein TsaB GO:0002949 CDA09_12710 dee61c27b2f66e49ba2a8e8eab3eac65 230 SUPERFAMILY SSF53067 105 211 1.42E-16 T 01-11-2018 CDA09_13040 bb0b44383ea5bd689645ee03d40e8183 825 Gene3D G3DSA:3.40.50.10810 220 426 9.6E-44 T 01-11-2018 IPR038718 SNF2-like, N-terminal domain superfamily CDA09_13040 bb0b44383ea5bd689645ee03d40e8183 825 SMART SM00490 560 642 2.1E-23 T 01-11-2018 IPR001650 Helicase, C-terminal CDA09_13040 bb0b44383ea5bd689645ee03d40e8183 825 Gene3D G3DSA:3.40.50.300 457 716 7.1E-60 T 01-11-2018 CDA09_13040 bb0b44383ea5bd689645ee03d40e8183 825 SUPERFAMILY SSF52540 221 447 1.13E-42 T 01-11-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CDA09_13040 bb0b44383ea5bd689645ee03d40e8183 825 SUPERFAMILY SSF52540 352 682 1.5E-51 T 01-11-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CDA09_13040 bb0b44383ea5bd689645ee03d40e8183 825 Pfam PF00176 SNF2 family N-terminal domain 254 517 1.3E-37 T 01-11-2018 IPR000330 SNF2-related, N-terminal domain GO:0005524 CDA09_13040 bb0b44383ea5bd689645ee03d40e8183 825 SMART SM00487 232 418 7.9E-24 T 01-11-2018 IPR014001 Helicase superfamily 1/2, ATP-binding domain CDA09_13040 bb0b44383ea5bd689645ee03d40e8183 825 Pfam PF00271 Helicase conserved C-terminal domain 537 642 5.1E-18 T 01-11-2018 IPR001650 Helicase, C-terminal CDA09_03330 6ea2e06102516e3bedc6b0c41c727fa7 315 SMART SM00904 181 306 1.6E-58 T 01-11-2018 IPR015865 Riboflavin kinase domain, bacterial/eukaryotic GO:0008531|GO:0009231 KEGG: 00740+2.7.1.26|MetaCyc: PWY-5523|MetaCyc: PWY-6168|MetaCyc: PWY-7863|Reactome: R-HSA-196843 CDA09_03330 6ea2e06102516e3bedc6b0c41c727fa7 315 SUPERFAMILY SSF52374 15 173 2.52E-38 T 01-11-2018 CDA09_03330 6ea2e06102516e3bedc6b0c41c727fa7 315 Gene3D G3DSA:3.40.50.620 2 184 1.7E-62 T 01-11-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold CDA09_03330 6ea2e06102516e3bedc6b0c41c727fa7 315 Pfam PF06574 FAD synthetase 11 164 1.2E-52 T 01-11-2018 IPR015864 FAD synthetase GO:0003919|GO:0009231 KEGG: 00740+2.7.1.26+2.7.7.2|MetaCyc: PWY-5523|MetaCyc: PWY-6167|MetaCyc: PWY-6168|MetaCyc: PWY-7863 CDA09_03330 6ea2e06102516e3bedc6b0c41c727fa7 315 TIGRFAM TIGR00083 ribF: riboflavin biosynthesis protein RibF 16 305 8.5E-96 T 01-11-2018 IPR002606 Riboflavin kinase, bacterial GO:0003919|GO:0008531|GO:0009231 KEGG: 00740+2.7.1.26+2.7.7.2|MetaCyc: PWY-5523|MetaCyc: PWY-6167|MetaCyc: PWY-6168|MetaCyc: PWY-7863 CDA09_03330 6ea2e06102516e3bedc6b0c41c727fa7 315 SUPERFAMILY SSF82114 172 307 1.87E-41 T 01-11-2018 IPR023465 Riboflavin kinase domain superfamily GO:0008531|GO:0009231 Reactome: R-HSA-196843 CDA09_03330 6ea2e06102516e3bedc6b0c41c727fa7 315 Pfam PF01687 Riboflavin kinase 182 305 3.2E-35 T 01-11-2018 IPR015865 Riboflavin kinase domain, bacterial/eukaryotic GO:0008531|GO:0009231 KEGG: 00740+2.7.1.26|MetaCyc: PWY-5523|MetaCyc: PWY-6168|MetaCyc: PWY-7863|Reactome: R-HSA-196843 CDA09_03330 6ea2e06102516e3bedc6b0c41c727fa7 315 Gene3D G3DSA:2.40.30.30 186 310 4.3E-37 T 01-11-2018 IPR023465 Riboflavin kinase domain superfamily GO:0008531|GO:0009231 Reactome: R-HSA-196843 CDA09_03330 6ea2e06102516e3bedc6b0c41c727fa7 315 PIRSF PIRSF004491 1 310 5.0E-102 T 01-11-2018 IPR002606 Riboflavin kinase, bacterial GO:0003919|GO:0008531|GO:0009231 KEGG: 00740+2.7.1.26+2.7.7.2|MetaCyc: PWY-5523|MetaCyc: PWY-6167|MetaCyc: PWY-6168|MetaCyc: PWY-7863 CDA09_06085 54c713344b7520b0ef5f9efba3b115d1 200 Gene3D G3DSA:3.40.50.360 1 196 2.9E-61 T 01-11-2018 IPR029039 Flavoprotein-like superfamily CDA09_06085 54c713344b7520b0ef5f9efba3b115d1 200 SUPERFAMILY SSF52218 1 191 2.62E-56 T 01-11-2018 IPR029039 Flavoprotein-like superfamily CDA09_06085 54c713344b7520b0ef5f9efba3b115d1 200 TIGRFAM TIGR01755 flav_wrbA: NAD(P)H:quinone oxidoreductase, type IV 4 192 5.9E-48 T 01-11-2018 IPR010089 Flavoprotein WrbA-like GO:0003955|GO:0010181 KEGG: 00130+1.6.5.2|MetaCyc: PWY-7731 CDA09_09700 78404b737cde327d9bef41a5b8a31637 252 Gene3D G3DSA:3.40.50.720 2 251 1.2E-74 T 01-11-2018 CDA09_09700 78404b737cde327d9bef41a5b8a31637 252 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 13 244 8.6E-55 T 01-11-2018 CDA09_09700 78404b737cde327d9bef41a5b8a31637 252 SUPERFAMILY SSF51735 5 245 7.16E-69 T 01-11-2018 IPR036291 NAD(P)-binding domain superfamily CDA09_09700 78404b737cde327d9bef41a5b8a31637 252 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 125 141 1.0E-33 T 01-11-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CDA09_09700 78404b737cde327d9bef41a5b8a31637 252 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 79 90 1.0E-33 T 01-11-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CDA09_09700 78404b737cde327d9bef41a5b8a31637 252 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 174 191 1.0E-33 T 01-11-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CDA09_09700 78404b737cde327d9bef41a5b8a31637 252 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 151 170 1.0E-33 T 01-11-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CDA09_09700 78404b737cde327d9bef41a5b8a31637 252 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 8 25 1.0E-33 T 01-11-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CDA09_09700 78404b737cde327d9bef41a5b8a31637 252 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 211 231 1.0E-33 T 01-11-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CDA09_09700 78404b737cde327d9bef41a5b8a31637 252 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 151 170 2.1E-10 T 01-11-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CDA09_09700 78404b737cde327d9bef41a5b8a31637 252 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 79 90 2.1E-10 T 01-11-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CDA09_09700 78404b737cde327d9bef41a5b8a31637 252 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 131 139 2.1E-10 T 01-11-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CDA09_09700 78404b737cde327d9bef41a5b8a31637 252 SMART SM00822 This enzymatic domain is part of bacterial polyketide synthases and catalyses the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain. It uses NADPH to reduce the keto group to a hydroxy group. 7 189 3.5E-4 T 01-11-2018 CDA09_09700 78404b737cde327d9bef41a5b8a31637 252 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 138 166 - T 01-11-2018 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 CDA09_06400 13af70af78fab7e328dae043beea4b02 667 Pfam PF00361 Proton-conducting membrane transporter 130 412 9.2E-55 T 01-11-2018 IPR001750 NADH:quinone oxidoreductase/Mrp antiporter, membrane subunit Reactome: R-HSA-611105|Reactome: R-HSA-6799198 CDA09_06400 13af70af78fab7e328dae043beea4b02 667 PRINTS PR01437 NADH-ubiquinone oxidoreductase subunit 4 signature 236 260 7.1E-12 T 01-11-2018 IPR003918 NADH:ubiquinone oxidoreductase GO:0008137|GO:0042773|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 CDA09_06400 13af70af78fab7e328dae043beea4b02 667 PRINTS PR01437 NADH-ubiquinone oxidoreductase subunit 4 signature 136 155 7.1E-12 T 01-11-2018 IPR003918 NADH:ubiquinone oxidoreductase GO:0008137|GO:0042773|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 CDA09_06400 13af70af78fab7e328dae043beea4b02 667 PRINTS PR01437 NADH-ubiquinone oxidoreductase subunit 4 signature 167 191 7.1E-12 T 01-11-2018 IPR003918 NADH:ubiquinone oxidoreductase GO:0008137|GO:0042773|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 CDA09_06400 13af70af78fab7e328dae043beea4b02 667 PRINTS PR01437 NADH-ubiquinone oxidoreductase subunit 4 signature 387 413 7.1E-12 T 01-11-2018 IPR003918 NADH:ubiquinone oxidoreductase GO:0008137|GO:0042773|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 CDA09_04010 84c102885eb4d7fbf8ad39b710e95353 363 Pfam PF01926 50S ribosome-binding GTPase 5 125 8.2E-24 T 01-11-2018 IPR006073 GTP binding domain GO:0005525 CDA09_04010 84c102885eb4d7fbf8ad39b710e95353 363 SUPERFAMILY SSF52540 3 301 1.84E-86 T 01-11-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CDA09_04010 84c102885eb4d7fbf8ad39b710e95353 363 Hamap MF_00944 Ribosome-binding ATPase YchF [ychF]. 2 363 45.053 T 01-11-2018 IPR004396 Ribosome-binding ATPase YchF/Obg-like ATPase 1 GO:0005525 Reactome: R-HSA-114608 CDA09_04010 84c102885eb4d7fbf8ad39b710e95353 363 TIGRFAM TIGR00092 TIGR00092: GTP-binding protein YchF 1 363 8.6E-160 T 01-11-2018 IPR004396 Ribosome-binding ATPase YchF/Obg-like ATPase 1 GO:0005525 Reactome: R-HSA-114608 CDA09_04010 84c102885eb4d7fbf8ad39b710e95353 363 Gene3D G3DSA:3.40.50.300 3 278 7.1E-152 T 01-11-2018 CDA09_04010 84c102885eb4d7fbf8ad39b710e95353 363 SUPERFAMILY SSF81271 279 359 1.02E-35 T 01-11-2018 IPR012676 TGS-like KEGG: 00970+6.1.1.3 CDA09_04010 84c102885eb4d7fbf8ad39b710e95353 363 Gene3D G3DSA:1.10.150.300 113 200 7.1E-152 T 01-11-2018 IPR023192 TGS-like domain superfamily Reactome: R-HSA-114608 CDA09_04010 84c102885eb4d7fbf8ad39b710e95353 363 Gene3D G3DSA:3.10.20.30 48 361 7.1E-152 T 01-11-2018 IPR012675 Beta-grasp domain superfamily CDA09_04010 84c102885eb4d7fbf8ad39b710e95353 363 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 70 85 2.2E-36 T 01-11-2018 IPR006073 GTP binding domain GO:0005525 CDA09_04010 84c102885eb4d7fbf8ad39b710e95353 363 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 87 105 2.2E-36 T 01-11-2018 IPR006073 GTP binding domain GO:0005525 CDA09_04010 84c102885eb4d7fbf8ad39b710e95353 363 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 5 25 2.2E-36 T 01-11-2018 IPR006073 GTP binding domain GO:0005525 CDA09_04010 84c102885eb4d7fbf8ad39b710e95353 363 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 26 44 2.2E-36 T 01-11-2018 IPR006073 GTP binding domain GO:0005525 CDA09_04010 84c102885eb4d7fbf8ad39b710e95353 363 Pfam PF06071 Protein of unknown function (DUF933) 279 362 1.8E-39 T 01-11-2018 IPR013029 YchF, C-terminal domain Reactome: R-HSA-114608 CDA09_04010 84c102885eb4d7fbf8ad39b710e95353 363 PIRSF PIRSF006641 1 363 6.9E-154 T 01-11-2018 IPR004396 Ribosome-binding ATPase YchF/Obg-like ATPase 1 GO:0005525 Reactome: R-HSA-114608 CDA09_11780 3f181ec68e5eb368836ae0ac93557439 384 ProSitePatterns PS00072 Acyl-CoA dehydrogenases signature 1. 123 135 - T 01-11-2018 IPR006089 Acyl-CoA dehydrogenase, conserved site GO:0003995|GO:0055114 CDA09_11780 3f181ec68e5eb368836ae0ac93557439 384 SUPERFAMILY SSF47203 230 380 7.41E-57 T 01-11-2018 IPR036250 Acyl-CoA dehydrogenase-like, C-terminal GO:0016627|GO:0055114 CDA09_11780 3f181ec68e5eb368836ae0ac93557439 384 ProSitePatterns PS00073 Acyl-CoA dehydrogenases signature 2. 337 356 - T 01-11-2018 IPR006089 Acyl-CoA dehydrogenase, conserved site GO:0003995|GO:0055114 CDA09_11780 3f181ec68e5eb368836ae0ac93557439 384 Gene3D G3DSA:1.10.540.10 3 119 7.9E-30 T 01-11-2018 IPR037069 Acyl-CoA dehydrogenase/oxidase, N-terminal domain superfamily GO:0016627|GO:0050660|GO:0055114 CDA09_11780 3f181ec68e5eb368836ae0ac93557439 384 Pfam PF02770 Acyl-CoA dehydrogenase, middle domain 121 217 6.4E-31 T 01-11-2018 IPR006091 Acyl-CoA oxidase/dehydrogenase, central domain GO:0016627|GO:0055114 CDA09_11780 3f181ec68e5eb368836ae0ac93557439 384 Pfam PF00441 Acyl-CoA dehydrogenase, C-terminal domain 232 378 2.7E-50 T 01-11-2018 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal GO:0016627|GO:0055114 CDA09_11780 3f181ec68e5eb368836ae0ac93557439 384 Pfam PF02771 Acyl-CoA dehydrogenase, N-terminal domain 8 117 3.8E-28 T 01-11-2018 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal GO:0016627|GO:0050660|GO:0055114 CDA09_11780 3f181ec68e5eb368836ae0ac93557439 384 PIRSF PIRSF016578 129 367 2.2E-14 T 01-11-2018 CDA09_11780 3f181ec68e5eb368836ae0ac93557439 384 PIRSF PIRSF016578 4 83 1.9E-6 T 01-11-2018 CDA09_11780 3f181ec68e5eb368836ae0ac93557439 384 Gene3D G3DSA:2.40.110.10 120 236 1.4E-44 T 01-11-2018 CDA09_11780 3f181ec68e5eb368836ae0ac93557439 384 SUPERFAMILY SSF56645 6 243 2.49E-79 T 01-11-2018 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain superfamily GO:0016627|GO:0055114 CDA09_11780 3f181ec68e5eb368836ae0ac93557439 384 Gene3D G3DSA:1.20.140.10 237 382 3.9E-57 T 01-11-2018 CDA09_20065 61a6991f3316bf987393faf5a56df83a 327 Gene3D G3DSA:3.40.640.10 34 235 5.8E-51 T 01-11-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 CDA09_20065 61a6991f3316bf987393faf5a56df83a 327 Gene3D G3DSA:3.90.1150.10 22 298 5.8E-51 T 01-11-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 CDA09_20065 61a6991f3316bf987393faf5a56df83a 327 Pfam PF00155 Aminotransferase class I and II 53 318 3.2E-34 T 01-11-2018 IPR004839 Aminotransferase, class I/classII GO:0009058|GO:0030170 CDA09_20065 61a6991f3316bf987393faf5a56df83a 327 ProSitePatterns PS00105 Aminotransferases class-I pyridoxal-phosphate attachment site. 187 200 - T 01-11-2018 IPR004838 Aminotransferases, class-I, pyridoxal-phosphate-binding site GO:0003824|GO:0009058|GO:0030170 CDA09_20065 61a6991f3316bf987393faf5a56df83a 327 TIGRFAM TIGR01140 L_thr_O3P_dcar: threonine-phosphate decarboxylase 4 320 1.6E-109 T 01-11-2018 IPR005860 L-threonine-O-3-phosphate decarboxylase GO:0003824|GO:0009236 KEGG: 00860+4.1.1.81|MetaCyc: PWY-5443 CDA09_20065 61a6991f3316bf987393faf5a56df83a 327 SUPERFAMILY SSF53383 3 322 5.98E-59 T 01-11-2018 IPR015424 Pyridoxal phosphate-dependent transferase CDA09_05675 5670d3aad04de7434fd61b86b1158f90 662 SUPERFAMILY SSF56801 35 651 5.1E-128 T 01-11-2018 CDA09_05675 5670d3aad04de7434fd61b86b1158f90 662 ProSitePatterns PS00455 Putative AMP-binding domain signature. 276 287 - T 01-11-2018 IPR020845 AMP-binding, conserved site CDA09_05675 5670d3aad04de7434fd61b86b1158f90 662 Pfam PF16177 Acetyl-coenzyme A synthetase N-terminus 42 97 8.8E-8 T 01-11-2018 IPR032387 Acetyl-coenzyme A synthetase, N-terminal domain KEGG: 00010+6.2.1.1|KEGG: 00620+6.2.1.1|KEGG: 00630+6.2.1.1|KEGG: 00640+6.2.1.1|KEGG: 00680+6.2.1.1|KEGG: 00720+6.2.1.1|MetaCyc: PWY-5108|MetaCyc: PWY-5132|MetaCyc: PWY-5133|MetaCyc: PWY-6672|MetaCyc: PWY-7118|MetaCyc: PWY-7857 CDA09_05675 5670d3aad04de7434fd61b86b1158f90 662 TIGRFAM TIGR01217 ac_ac_CoA_syn: acetoacetate-CoA ligase 9 660 3.0E-298 T 01-11-2018 IPR005914 Acetoacetyl-CoA synthase GO:0006629|GO:0030729 KEGG: 00280+6.2.1.16|KEGG: 00650+6.2.1.16|Reactome: R-HSA-77111 CDA09_05675 5670d3aad04de7434fd61b86b1158f90 662 Pfam PF00501 AMP-binding enzyme 104 532 3.7E-51 T 01-11-2018 IPR000873 AMP-dependent synthetase/ligase GO:0003824 CDA09_05675 5670d3aad04de7434fd61b86b1158f90 662 Gene3D G3DSA:3.40.50.12780 81 528 1.5E-64 T 01-11-2018 CDA09_05675 5670d3aad04de7434fd61b86b1158f90 662 Gene3D G3DSA:3.30.300.30 532 657 1.7E-14 T 01-11-2018 CDA09_19480 e471fd94b4ac989661815eaaa1819ac4 89 SUPERFAMILY SSF50249 9 86 1.5E-30 T 01-11-2018 IPR012340 Nucleic acid-binding, OB-fold CDA09_19480 e471fd94b4ac989661815eaaa1819ac4 89 Gene3D G3DSA:2.40.50.140 8 87 7.2E-33 T 01-11-2018 CDA09_19480 e471fd94b4ac989661815eaaa1819ac4 89 TIGRFAM TIGR03635 uS17_bact: ribosomal protein uS17 9 79 2.3E-33 T 01-11-2018 IPR019984 30S ribosomal protein S17 GO:0003735|GO:0005622|GO:0005840|GO:0006412 CDA09_19480 e471fd94b4ac989661815eaaa1819ac4 89 Pfam PF00366 Ribosomal protein S17 14 81 1.8E-30 T 01-11-2018 IPR000266 Ribosomal protein S17/S11 GO:0003735|GO:0005622|GO:0005840|GO:0006412 CDA09_19480 e471fd94b4ac989661815eaaa1819ac4 89 Hamap MF_01345_B 30S ribosomal protein S17 [rpsQ]. 9 84 22.925 T 01-11-2018 IPR019984 30S ribosomal protein S17 GO:0003735|GO:0005622|GO:0005840|GO:0006412 CDA09_19480 e471fd94b4ac989661815eaaa1819ac4 89 ProSitePatterns PS00056 Ribosomal protein S17 signature. 60 72 - T 01-11-2018 IPR019979 Ribosomal protein S17, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 CDA09_19480 e471fd94b4ac989661815eaaa1819ac4 89 ProDom PD001295 RIBOSOMAL S17 30S RIBONUCLEOPROTEIN RRNA-BINDING RNA-BINDING 40S S11 S17P S11 9 79 2.0E-33 T 01-11-2018 IPR000266 Ribosomal protein S17/S11 GO:0003735|GO:0005622|GO:0005840|GO:0006412 CDA09_19480 e471fd94b4ac989661815eaaa1819ac4 89 PRINTS PR00973 Ribosomal protein S17 family signature 28 51 3.0E-12 T 01-11-2018 IPR000266 Ribosomal protein S17/S11 GO:0003735|GO:0005622|GO:0005840|GO:0006412 CDA09_19480 e471fd94b4ac989661815eaaa1819ac4 89 PRINTS PR00973 Ribosomal protein S17 family signature 60 70 3.0E-12 T 01-11-2018 IPR000266 Ribosomal protein S17/S11 GO:0003735|GO:0005622|GO:0005840|GO:0006412 CDA09_19480 e471fd94b4ac989661815eaaa1819ac4 89 PRINTS PR00973 Ribosomal protein S17 family signature 70 77 3.0E-12 T 01-11-2018 IPR000266 Ribosomal protein S17/S11 GO:0003735|GO:0005622|GO:0005840|GO:0006412 CDA09_20780 e0de1620c55565e90d8f038c2ab5191e 557 SUPERFAMILY SSF141868 303 550 1.96E-78 T 01-11-2018 IPR035919 EAL domain superfamily CDA09_20780 e0de1620c55565e90d8f038c2ab5191e 557 SMART SM00091 9 75 3.2E-6 T 01-11-2018 IPR000014 PAS domain CDA09_20780 e0de1620c55565e90d8f038c2ab5191e 557 Gene3D G3DSA:3.30.450.20 3 132 3.9E-34 T 01-11-2018 CDA09_20780 e0de1620c55565e90d8f038c2ab5191e 557 SUPERFAMILY SSF55785 17 120 6.81E-30 T 01-11-2018 IPR035965 PAS domain superfamily CDA09_20780 e0de1620c55565e90d8f038c2ab5191e 557 SMART SM00086 81 123 7.1E-7 T 01-11-2018 IPR001610 PAC motif CDA09_20780 e0de1620c55565e90d8f038c2ab5191e 557 SMART SM00052 298 543 5.9E-100 T 01-11-2018 IPR001633 EAL domain CDA09_20780 e0de1620c55565e90d8f038c2ab5191e 557 Gene3D G3DSA:3.30.70.270 133 300 1.1E-33 T 01-11-2018 CDA09_20780 e0de1620c55565e90d8f038c2ab5191e 557 Pfam PF00563 EAL domain 304 537 1.4E-67 T 01-11-2018 IPR001633 EAL domain CDA09_20780 e0de1620c55565e90d8f038c2ab5191e 557 Pfam PF00989 PAS fold 16 120 9.1E-15 T 01-11-2018 IPR013767 PAS fold GO:0006355 CDA09_20780 e0de1620c55565e90d8f038c2ab5191e 557 SUPERFAMILY SSF55073 139 289 4.94E-29 T 01-11-2018 IPR029787 Nucleotide cyclase CDA09_20780 e0de1620c55565e90d8f038c2ab5191e 557 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 131 285 5.8E-19 T 01-11-2018 IPR000160 GGDEF domain CDA09_20780 e0de1620c55565e90d8f038c2ab5191e 557 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 14 130 1.2E-18 T 01-11-2018 IPR000014 PAS domain CDA09_20780 e0de1620c55565e90d8f038c2ab5191e 557 SMART SM00267 123 288 2.3E-28 T 01-11-2018 IPR000160 GGDEF domain CDA09_20780 e0de1620c55565e90d8f038c2ab5191e 557 Pfam PF00990 Diguanylate cyclase, GGDEF domain 134 282 1.3E-26 T 01-11-2018 IPR000160 GGDEF domain CDA09_20780 e0de1620c55565e90d8f038c2ab5191e 557 Gene3D G3DSA:3.20.20.450 301 552 1.9E-90 T 01-11-2018 IPR035919 EAL domain superfamily CDA09_14605 df728206d86f713e122c8b4a476cb68d 169 SUPERFAMILY SSF56784 3 166 2.8E-40 T 01-11-2018 IPR036412 HAD-like superfamily CDA09_14605 df728206d86f713e122c8b4a476cb68d 169 Pfam PF08282 haloacid dehalogenase-like hydrolase 83 141 1.4E-11 T 01-11-2018 CDA09_14605 df728206d86f713e122c8b4a476cb68d 169 Gene3D G3DSA:3.40.50.1000 1 168 2.4E-55 T 01-11-2018 IPR023214 HAD superfamily CDA09_14605 df728206d86f713e122c8b4a476cb68d 169 TIGRFAM TIGR01670 KdsC-phosphatas: 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase, YrbI family 7 159 1.3E-48 T 01-11-2018 IPR010023 KdsC family GO:0016788 KEGG: 00540+3.1.3.45|MetaCyc: PWY-1269|MetaCyc: PWY-7674 CDA09_14605 df728206d86f713e122c8b4a476cb68d 169 TIGRFAM TIGR01662 HAD-SF-IIIA: HAD hydrolase, family IIIA 8 122 4.8E-21 T 01-11-2018 IPR006549 HAD-superfamily hydrolase,subfamily IIIA Reactome: R-HSA-5649702 CDA09_14605 df728206d86f713e122c8b4a476cb68d 169 TIGRFAM TIGR02726 phenyl_P_delta: phenylphosphate carboxylase, delta subunit 1 169 5.1E-111 T 01-11-2018 IPR014098 Phenylphosphate carboxylase, delta subunit CDA09_14605 df728206d86f713e122c8b4a476cb68d 169 PIRSF PIRSF006118 1 169 1.2E-69 T 01-11-2018 IPR010023 KdsC family GO:0016788 KEGG: 00540+3.1.3.45|MetaCyc: PWY-1269|MetaCyc: PWY-7674 CDA09_04490 2d0067e9ebad999641b406ff7e3e4c30 847 Pfam PF00773 RNB domain 283 610 1.5E-107 T 01-11-2018 IPR001900 Ribonuclease II/R GO:0003723|GO:0004540 CDA09_04490 2d0067e9ebad999641b406ff7e3e4c30 847 SUPERFAMILY SSF50249 91 171 5.31E-21 T 01-11-2018 IPR012340 Nucleic acid-binding, OB-fold CDA09_04490 2d0067e9ebad999641b406ff7e3e4c30 847 Pfam PF08206 Ribonuclease B OB domain 111 168 9.5E-23 T 01-11-2018 IPR013223 Ribonuclease B, N-terminal OB domain CDA09_04490 2d0067e9ebad999641b406ff7e3e4c30 847 Hamap MF_01895 Ribonuclease R [rnr]. 62 735 57.204 T 01-11-2018 IPR011805 Ribonuclease R GO:0003723|GO:0004518 CDA09_04490 2d0067e9ebad999641b406ff7e3e4c30 847 SMART SM00316 104 166 21.0 T 01-11-2018 IPR022967 RNA-binding domain, S1 CDA09_04490 2d0067e9ebad999641b406ff7e3e4c30 847 SMART SM00316 652 735 4.6E-12 T 01-11-2018 IPR022967 RNA-binding domain, S1 CDA09_04490 2d0067e9ebad999641b406ff7e3e4c30 847 Gene3D G3DSA:2.40.50.140 99 171 2.0E-20 T 01-11-2018 CDA09_04490 2d0067e9ebad999641b406ff7e3e4c30 847 SMART SM00955 283 611 2.2E-188 T 01-11-2018 IPR001900 Ribonuclease II/R GO:0003723|GO:0004540 CDA09_04490 2d0067e9ebad999641b406ff7e3e4c30 847 SUPERFAMILY SSF50249 654 734 1.17E-19 T 01-11-2018 IPR012340 Nucleic acid-binding, OB-fold CDA09_04490 2d0067e9ebad999641b406ff7e3e4c30 847 SUPERFAMILY SSF50249 244 651 5.54E-144 T 01-11-2018 IPR012340 Nucleic acid-binding, OB-fold CDA09_04490 2d0067e9ebad999641b406ff7e3e4c30 847 TIGRFAM TIGR00358 3_prime_RNase: VacB and RNase II family 3'-5' exoribonucleases 92 735 5.7E-223 T 01-11-2018 IPR004476 Ribonuclease II/ribonuclease R GO:0003723|GO:0004540|GO:0016070 CDA09_04490 2d0067e9ebad999641b406ff7e3e4c30 847 SUPERFAMILY SSF50249 162 260 4.71E-20 T 01-11-2018 IPR012340 Nucleic acid-binding, OB-fold CDA09_04490 2d0067e9ebad999641b406ff7e3e4c30 847 Pfam PF00575 S1 RNA binding domain 651 732 4.0E-11 T 01-11-2018 IPR003029 S1 domain GO:0003676 CDA09_04490 2d0067e9ebad999641b406ff7e3e4c30 847 Gene3D G3DSA:2.40.50.140 656 767 3.4E-21 T 01-11-2018 CDA09_04490 2d0067e9ebad999641b406ff7e3e4c30 847 ProSitePatterns PS01175 Ribonuclease II family signature. 578 602 - T 01-11-2018 IPR022966 Ribonuclease II/R, conserved site CDA09_04490 2d0067e9ebad999641b406ff7e3e4c30 847 TIGRFAM TIGR02063 RNase_R: ribonuclease R 44 736 8.9E-259 T 01-11-2018 IPR011805 Ribonuclease R GO:0003723|GO:0004518 CDA09_04490 2d0067e9ebad999641b406ff7e3e4c30 847 SMART SM00357 110 169 5.6E-14 T 01-11-2018 IPR011129 Cold shock domain GO:0003676 CDA09_05890 1d344232ebdec0f60d6c6778870e6738 383 Pfam PF13533 Biotin-lipoyl like 63 110 5.8E-11 T 01-11-2018 IPR039562 Membrane fusion protein, biotin-lipoyl like domain CDA09_05890 1d344232ebdec0f60d6c6778870e6738 383 PRINTS PR01490 Gram-negative bacterial RTX secretion protein D signature 258 279 1.8E-8 T 01-11-2018 IPR003997 RTX secretion protein D, Gram-negative bacteria GO:0009306|GO:0016020 CDA09_05890 1d344232ebdec0f60d6c6778870e6738 383 PRINTS PR01490 Gram-negative bacterial RTX secretion protein D signature 73 93 1.8E-8 T 01-11-2018 IPR003997 RTX secretion protein D, Gram-negative bacteria GO:0009306|GO:0016020 CDA09_05890 1d344232ebdec0f60d6c6778870e6738 383 PRINTS PR01490 Gram-negative bacterial RTX secretion protein D signature 290 314 1.8E-8 T 01-11-2018 IPR003997 RTX secretion protein D, Gram-negative bacteria GO:0009306|GO:0016020 CDA09_05890 1d344232ebdec0f60d6c6778870e6738 383 PRINTS PR01490 Gram-negative bacterial RTX secretion protein D signature 364 379 1.8E-8 T 01-11-2018 IPR003997 RTX secretion protein D, Gram-negative bacteria GO:0009306|GO:0016020 CDA09_05890 1d344232ebdec0f60d6c6778870e6738 383 Gene3D G3DSA:2.40.30.170 259 380 1.6E-30 T 01-11-2018 CDA09_05890 1d344232ebdec0f60d6c6778870e6738 383 SUPERFAMILY SSF111369 57 138 4.18E-8 T 01-11-2018 CDA09_05890 1d344232ebdec0f60d6c6778870e6738 383 Gene3D G3DSA:2.40.50.100 61 95 7.7E-10 T 01-11-2018 CDA09_05890 1d344232ebdec0f60d6c6778870e6738 383 Pfam PF13437 HlyD family secretion protein 246 358 7.1E-16 T 01-11-2018 CDA09_05890 1d344232ebdec0f60d6c6778870e6738 383 Gene3D G3DSA:1.10.287.470 96 115 7.7E-10 T 01-11-2018 CDA09_05890 1d344232ebdec0f60d6c6778870e6738 383 SUPERFAMILY SSF111369 195 296 4.84E-10 T 01-11-2018 CDA09_05890 1d344232ebdec0f60d6c6778870e6738 383 Gene3D G3DSA:1.10.287.470 126 214 1.2E-10 T 01-11-2018 CDA09_10420 6d17dfaffc3b27d96e2f7c829d136b6a 505 SUPERFAMILY SSF47240 5 499 4.72E-156 T 01-11-2018 IPR009078 Ferritin-like superfamily CDA09_10420 6d17dfaffc3b27d96e2f7c829d136b6a 505 Pfam PF04945 YHS domain 411 453 6.6E-14 T 01-11-2018 IPR007029 YHS domain CDA09_10420 6d17dfaffc3b27d96e2f7c829d136b6a 505 Gene3D G3DSA:1.10.620.20 3 505 2.0E-195 T 01-11-2018 IPR012348 Ribonucleotide reductase-like GO:0016491|GO:0055114 Reactome: R-HSA-499943 CDA09_10420 6d17dfaffc3b27d96e2f7c829d136b6a 505 Pfam PF02332 Methane/Phenol/Toluene Hydroxylase 25 253 1.3E-72 T 01-11-2018 IPR003430 Methane/phenol/toluene hydroxylase GO:0006725|GO:0055114 CDA09_15205 6249059bfaba4121be2d1adcd485aa00 240 Gene3D G3DSA:2.40.50.140 7 80 3.0E-29 T 01-11-2018 CDA09_15205 6249059bfaba4121be2d1adcd485aa00 240 SUPERFAMILY SSF57863 91 211 4.71E-10 T 01-11-2018 IPR037278 ARFGAP/RecO-like zinc finger CDA09_15205 6249059bfaba4121be2d1adcd485aa00 240 Hamap MF_00201 DNA repair protein RecO [recO]. 6 237 23.4 T 01-11-2018 IPR003717 Recombination protein O, RecO GO:0006281|GO:0006310 CDA09_15205 6249059bfaba4121be2d1adcd485aa00 240 Gene3D G3DSA:1.20.1440.120 85 239 1.3E-49 T 01-11-2018 CDA09_15205 6249059bfaba4121be2d1adcd485aa00 240 TIGRFAM TIGR00613 reco: DNA repair protein RecO 11 236 8.0E-22 T 01-11-2018 IPR003717 Recombination protein O, RecO GO:0006281|GO:0006310 CDA09_15205 6249059bfaba4121be2d1adcd485aa00 240 Pfam PF11967 Recombination protein O N terminal 10 78 3.0E-19 T 01-11-2018 IPR022572 DNA replication/recombination mediator RecO, N-terminal CDA09_15205 6249059bfaba4121be2d1adcd485aa00 240 Pfam PF02565 Recombination protein O C terminal 88 232 4.7E-22 T 01-11-2018 IPR003717 Recombination protein O, RecO GO:0006281|GO:0006310 CDA09_15205 6249059bfaba4121be2d1adcd485aa00 240 SUPERFAMILY SSF50249 9 78 9.25E-13 T 01-11-2018 IPR012340 Nucleic acid-binding, OB-fold CDA09_04960 870af7de4d732d752161698536a427db 253 Gene3D G3DSA:3.40.50.2300 1 129 6.7E-33 T 01-11-2018 CDA09_04960 870af7de4d732d752161698536a427db 253 Pfam PF04397 LytTr DNA-binding domain 152 251 1.2E-19 T 01-11-2018 IPR007492 LytTR DNA-binding domain GO:0003677 CDA09_04960 870af7de4d732d752161698536a427db 253 Gene3D G3DSA:2.40.50.40 142 208 8.7E-8 T 01-11-2018 CDA09_04960 870af7de4d732d752161698536a427db 253 SMART SM00448 6 120 3.3E-26 T 01-11-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 CDA09_04960 870af7de4d732d752161698536a427db 253 Pfam PF00072 Response regulator receiver domain 8 120 6.7E-23 T 01-11-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 CDA09_04960 870af7de4d732d752161698536a427db 253 SMART SM00850 151 252 8.8E-25 T 01-11-2018 IPR007492 LytTR DNA-binding domain GO:0003677 CDA09_04960 870af7de4d732d752161698536a427db 253 SUPERFAMILY SSF52172 6 134 1.99E-33 T 01-11-2018 IPR011006 CheY-like superfamily CDA09_01365 8628867b504445822972910bb7dd784a 166 SUPERFAMILY SSF81901 16 160 1.13E-32 T 01-11-2018 CDA09_01365 8628867b504445822972910bb7dd784a 166 Gene3D G3DSA:1.25.40.10 10 164 4.8E-40 T 01-11-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 CDA09_01365 8628867b504445822972910bb7dd784a 166 Pfam PF08238 Sel1 repeat 117 152 1.8E-8 T 01-11-2018 IPR006597 Sel1-like repeat CDA09_01365 8628867b504445822972910bb7dd784a 166 Pfam PF08238 Sel1 repeat 41 76 1.4E-10 T 01-11-2018 IPR006597 Sel1-like repeat CDA09_01365 8628867b504445822972910bb7dd784a 166 Pfam PF08238 Sel1 repeat 78 116 5.8E-4 T 01-11-2018 IPR006597 Sel1-like repeat CDA09_01365 8628867b504445822972910bb7dd784a 166 SMART SM00671 41 76 1.4E-10 T 01-11-2018 IPR006597 Sel1-like repeat CDA09_01365 8628867b504445822972910bb7dd784a 166 SMART SM00671 117 152 1.7E-8 T 01-11-2018 IPR006597 Sel1-like repeat CDA09_01365 8628867b504445822972910bb7dd784a 166 SMART SM00671 77 116 0.93 T 01-11-2018 IPR006597 Sel1-like repeat CDA09_22980 77c3e6c55e16e97e582b345801f70ff7 537 TIGRFAM TIGR03409 urea_trans_UrtB: urea ABC transporter, permease protein UrtB 243 533 7.2E-123 T 01-11-2018 IPR017779 ABC transporter, urea permease protein UrtB, bacterial-type CDA09_22980 77c3e6c55e16e97e582b345801f70ff7 537 SUPERFAMILY SSF48371 122 226 4.32E-5 T 01-11-2018 IPR016024 Armadillo-type fold CDA09_22980 77c3e6c55e16e97e582b345801f70ff7 537 Pfam PF02653 Branched-chain amino acid transport system / permease component 244 519 1.6E-47 T 01-11-2018 IPR001851 ABC transporter, permease GO:0016020|GO:0022857|GO:0055085 CDA09_14685 24e89a7ee1642657c91f53b0dc3363fc 472 Gene3D G3DSA:3.90.1150.10 110 459 9.1E-77 T 01-11-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 CDA09_14685 24e89a7ee1642657c91f53b0dc3363fc 472 Pfam PF00155 Aminotransferase class I and II 145 462 2.9E-26 T 01-11-2018 IPR004839 Aminotransferase, class I/classII GO:0009058|GO:0030170 CDA09_14685 24e89a7ee1642657c91f53b0dc3363fc 472 Gene3D G3DSA:1.10.10.10 2 78 1.7E-19 T 01-11-2018 IPR036388 Winged helix-like DNA-binding domain superfamily CDA09_14685 24e89a7ee1642657c91f53b0dc3363fc 472 Gene3D G3DSA:3.40.640.10 148 364 9.1E-77 T 01-11-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 CDA09_14685 24e89a7ee1642657c91f53b0dc3363fc 472 Pfam PF00392 Bacterial regulatory proteins, gntR family 14 77 2.2E-14 T 01-11-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 CDA09_14685 24e89a7ee1642657c91f53b0dc3363fc 472 SUPERFAMILY SSF53383 108 463 4.76E-78 T 01-11-2018 IPR015424 Pyridoxal phosphate-dependent transferase CDA09_14685 24e89a7ee1642657c91f53b0dc3363fc 472 SMART SM00345 18 77 1.6E-17 T 01-11-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 CDA09_14685 24e89a7ee1642657c91f53b0dc3363fc 472 SUPERFAMILY SSF46785 6 81 2.17E-20 T 01-11-2018 IPR036390 Winged helix DNA-binding domain superfamily CDA09_22440 a0120abd0c678f3ae389157151c33439 107 Pfam PF13473 Cupredoxin-like domain 5 106 3.1E-28 T 01-11-2018 IPR028096 EfeO-type cupredoxin-like domain CDA09_22440 a0120abd0c678f3ae389157151c33439 107 SUPERFAMILY SSF49503 6 106 6.39E-16 T 01-11-2018 IPR008972 Cupredoxin CDA09_22440 a0120abd0c678f3ae389157151c33439 107 Gene3D G3DSA:2.60.40.420 12 106 1.3E-21 T 01-11-2018 IPR008972 Cupredoxin CDA09_00625 d0d0236984a45fdb70744d6929170ba2 142 SUPERFAMILY SSF57716 103 140 1.41E-7 T 01-11-2018 CDA09_00625 d0d0236984a45fdb70744d6929170ba2 142 TIGRFAM TIGR02420 dksA: RNA polymerase-binding protein DksA 25 132 1.9E-37 T 01-11-2018 IPR012784 RNA polymerase-binding transcription factor DksA GO:0008270 CDA09_00625 d0d0236984a45fdb70744d6929170ba2 142 Gene3D G3DSA:1.20.120.910 9 142 1.6E-37 T 01-11-2018 CDA09_00625 d0d0236984a45fdb70744d6929170ba2 142 Hamap MF_00926 RNA polymerase-binding transcription factor DksA [dksA]. 21 142 25.146 T 01-11-2018 IPR012784 RNA polymerase-binding transcription factor DksA GO:0008270 CDA09_00625 d0d0236984a45fdb70744d6929170ba2 142 SUPERFAMILY SSF109635 11 102 4.45E-27 T 01-11-2018 IPR037187 DksA, N-terminal domain superfamily CDA09_00625 d0d0236984a45fdb70744d6929170ba2 142 Pfam PF01258 Prokaryotic dksA/traR C4-type zinc finger 101 136 5.4E-11 T 01-11-2018 IPR000962 Zinc finger, DksA/TraR C4-type GO:0008270 CDA09_16070 fcf5cf19f87f9f6d5d59249d575cae46 787 Pfam PF03176 MMPL family 164 383 2.2E-5 T 01-11-2018 IPR004869 Membrane transport protein MMPL domain GO:0016020 CDA09_16070 fcf5cf19f87f9f6d5d59249d575cae46 787 Pfam PF03176 MMPL family 570 770 2.2E-17 T 01-11-2018 IPR004869 Membrane transport protein MMPL domain GO:0016020 CDA09_16070 fcf5cf19f87f9f6d5d59249d575cae46 787 SUPERFAMILY SSF82866 55 383 1.31E-29 T 01-11-2018 CDA09_16070 fcf5cf19f87f9f6d5d59249d575cae46 787 Gene3D G3DSA:1.20.1640.10 209 389 1.4E-9 T 01-11-2018 CDA09_16070 fcf5cf19f87f9f6d5d59249d575cae46 787 Gene3D G3DSA:1.20.1640.10 592 773 2.7E-13 T 01-11-2018 CDA09_16070 fcf5cf19f87f9f6d5d59249d575cae46 787 PRINTS PR00702 Acriflavin resistance protein family signature 744 767 2.1E-5 T 01-11-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 CDA09_16070 fcf5cf19f87f9f6d5d59249d575cae46 787 PRINTS PR00702 Acriflavin resistance protein family signature 327 351 2.1E-5 T 01-11-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 CDA09_16070 fcf5cf19f87f9f6d5d59249d575cae46 787 PRINTS PR00702 Acriflavin resistance protein family signature 669 693 2.1E-5 T 01-11-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 CDA09_16070 fcf5cf19f87f9f6d5d59249d575cae46 787 SUPERFAMILY SSF82866 572 769 1.96E-32 T 01-11-2018 CDA09_17190 a80c9ebef3f5999556772345ea915090 408 SUPERFAMILY SSF53633 4 242 2.88E-75 T 01-11-2018 IPR036393 Acetylglutamate kinase-like superfamily CDA09_17190 a80c9ebef3f5999556772345ea915090 408 TIGRFAM TIGR00656 asp_kin_monofn: aspartate kinase, monofunctional class 1 403 2.3E-133 T 01-11-2018 IPR005260 Aspartate kinase, monofunctional class GO:0004072|GO:0009089 KEGG: 00260+2.7.2.4|KEGG: 00261+2.7.2.4|KEGG: 00270+2.7.2.4|KEGG: 00300+2.7.2.4|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|MetaCyc: PWY-6160|MetaCyc: PWY-6559|MetaCyc: PWY-6562|MetaCyc: PWY-7153|MetaCyc: PWY-7977 CDA09_17190 a80c9ebef3f5999556772345ea915090 408 Gene3D G3DSA:3.40.1160.10 1 255 5.0E-92 T 01-11-2018 IPR036393 Acetylglutamate kinase-like superfamily CDA09_17190 a80c9ebef3f5999556772345ea915090 408 Gene3D G3DSA:3.30.70.260 256 404 2.6E-60 T 01-11-2018 CDA09_17190 a80c9ebef3f5999556772345ea915090 408 PIRSF PIRSF000726 53 408 1.8E-149 T 01-11-2018 IPR005260 Aspartate kinase, monofunctional class GO:0004072|GO:0009089 KEGG: 00260+2.7.2.4|KEGG: 00261+2.7.2.4|KEGG: 00270+2.7.2.4|KEGG: 00300+2.7.2.4|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|MetaCyc: PWY-6160|MetaCyc: PWY-6559|MetaCyc: PWY-6562|MetaCyc: PWY-7153|MetaCyc: PWY-7977 CDA09_17190 a80c9ebef3f5999556772345ea915090 408 PIRSF PIRSF000726 1 60 5.4E-21 T 01-11-2018 IPR005260 Aspartate kinase, monofunctional class GO:0004072|GO:0009089 KEGG: 00260+2.7.2.4|KEGG: 00261+2.7.2.4|KEGG: 00270+2.7.2.4|KEGG: 00300+2.7.2.4|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|MetaCyc: PWY-6160|MetaCyc: PWY-6559|MetaCyc: PWY-6562|MetaCyc: PWY-7153|MetaCyc: PWY-7977 CDA09_17190 a80c9ebef3f5999556772345ea915090 408 ProSitePatterns PS00324 Aspartokinase signature. 5 13 - T 01-11-2018 IPR018042 Aspartate kinase, conserved site GO:0004072|GO:0008652 KEGG: 00260+2.7.2.4|KEGG: 00261+2.7.2.4|KEGG: 00270+2.7.2.4|KEGG: 00300+2.7.2.4|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|MetaCyc: PWY-6160|MetaCyc: PWY-6559|MetaCyc: PWY-6562|MetaCyc: PWY-7153|MetaCyc: PWY-7977 CDA09_17190 a80c9ebef3f5999556772345ea915090 408 SUPERFAMILY SSF55021 329 405 1.52E-25 T 01-11-2018 CDA09_17190 a80c9ebef3f5999556772345ea915090 408 Pfam PF01842 ACT domain 269 326 1.5E-10 T 01-11-2018 IPR002912 ACT domain CDA09_17190 a80c9ebef3f5999556772345ea915090 408 PRINTS PR00474 Glutamate 5-kinase family signature 105 126 5.6E-5 T 01-11-2018 IPR001057 Glutamate/acetylglutamate kinase Reactome: R-HSA-70614 CDA09_17190 a80c9ebef3f5999556772345ea915090 408 PRINTS PR00474 Glutamate 5-kinase family signature 33 47 5.6E-5 T 01-11-2018 IPR001057 Glutamate/acetylglutamate kinase Reactome: R-HSA-70614 CDA09_17190 a80c9ebef3f5999556772345ea915090 408 PRINTS PR00474 Glutamate 5-kinase family signature 152 179 5.6E-5 T 01-11-2018 IPR001057 Glutamate/acetylglutamate kinase Reactome: R-HSA-70614 CDA09_17190 a80c9ebef3f5999556772345ea915090 408 Gene3D G3DSA:3.30.70.260 262 339 2.6E-60 T 01-11-2018 CDA09_17190 a80c9ebef3f5999556772345ea915090 408 TIGRFAM TIGR00657 asp_kinases: aspartate kinase 58 403 5.7E-120 T 01-11-2018 IPR001341 Aspartate kinase GO:0004072|GO:0008652 KEGG: 00260+2.7.2.4|KEGG: 00261+2.7.2.4|KEGG: 00270+2.7.2.4|KEGG: 00300+2.7.2.4|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|MetaCyc: PWY-6160|MetaCyc: PWY-6559|MetaCyc: PWY-6562|MetaCyc: PWY-7153|MetaCyc: PWY-7977 CDA09_17190 a80c9ebef3f5999556772345ea915090 408 Pfam PF13840 ACT domain 337 400 1.0E-14 T 01-11-2018 IPR027795 CASTOR, ACT domain CDA09_17190 a80c9ebef3f5999556772345ea915090 408 SUPERFAMILY SSF55021 249 328 1.4E-19 T 01-11-2018 CDA09_17190 a80c9ebef3f5999556772345ea915090 408 Pfam PF00696 Amino acid kinase family 3 229 6.2E-51 T 01-11-2018 IPR001048 Aspartate/glutamate/uridylate kinase Reactome: R-HSA-70614 CDA09_10430 c613510762e8d9e1dc6d2cb47a37e4e9 353 SUPERFAMILY SSF52343 206 337 1.44E-36 T 01-11-2018 IPR039261 Ferredoxin-NADP reductase (FNR), nucleotide-binding domain CDA09_10430 c613510762e8d9e1dc6d2cb47a37e4e9 353 Pfam PF00175 Oxidoreductase NAD-binding domain 212 316 1.8E-18 T 01-11-2018 IPR001433 Oxidoreductase FAD/NAD(P)-binding GO:0016491|GO:0055114 CDA09_10430 c613510762e8d9e1dc6d2cb47a37e4e9 353 PRINTS PR00410 Phenol hydroxylase reductase family signature 151 158 1.4E-28 T 01-11-2018 IPR001221 Phenol hydroxylase reductase GO:0055114 CDA09_10430 c613510762e8d9e1dc6d2cb47a37e4e9 353 PRINTS PR00410 Phenol hydroxylase reductase family signature 304 312 1.4E-28 T 01-11-2018 IPR001221 Phenol hydroxylase reductase GO:0055114 CDA09_10430 c613510762e8d9e1dc6d2cb47a37e4e9 353 PRINTS PR00410 Phenol hydroxylase reductase family signature 134 146 1.4E-28 T 01-11-2018 IPR001221 Phenol hydroxylase reductase GO:0055114 CDA09_10430 c613510762e8d9e1dc6d2cb47a37e4e9 353 PRINTS PR00410 Phenol hydroxylase reductase family signature 211 230 1.4E-28 T 01-11-2018 IPR001221 Phenol hydroxylase reductase GO:0055114 CDA09_10430 c613510762e8d9e1dc6d2cb47a37e4e9 353 PRINTS PR00410 Phenol hydroxylase reductase family signature 236 245 1.4E-28 T 01-11-2018 IPR001221 Phenol hydroxylase reductase GO:0055114 CDA09_10430 c613510762e8d9e1dc6d2cb47a37e4e9 353 PRINTS PR00410 Phenol hydroxylase reductase family signature 195 204 1.4E-28 T 01-11-2018 IPR001221 Phenol hydroxylase reductase GO:0055114 CDA09_10430 c613510762e8d9e1dc6d2cb47a37e4e9 353 Gene3D G3DSA:3.10.20.30 1 94 8.7E-24 T 01-11-2018 IPR012675 Beta-grasp domain superfamily CDA09_10430 c613510762e8d9e1dc6d2cb47a37e4e9 353 SUPERFAMILY SSF63380 105 201 1.53E-24 T 01-11-2018 IPR017938 Riboflavin synthase-like beta-barrel CDA09_10430 c613510762e8d9e1dc6d2cb47a37e4e9 353 Gene3D G3DSA:2.40.30.10 105 201 4.0E-23 T 01-11-2018 CDA09_10430 c613510762e8d9e1dc6d2cb47a37e4e9 353 Pfam PF00970 Oxidoreductase FAD-binding domain 108 200 8.4E-15 T 01-11-2018 IPR008333 Flavoprotein pyridine nucleotide cytochrome reductase-like, FAD-binding domain Reactome: R-HSA-1237044 CDA09_10430 c613510762e8d9e1dc6d2cb47a37e4e9 353 Pfam PF00111 2Fe-2S iron-sulfur cluster binding domain 6 81 2.2E-15 T 01-11-2018 IPR001041 2Fe-2S ferredoxin-type iron-sulfur binding domain GO:0009055|GO:0051536 CDA09_10430 c613510762e8d9e1dc6d2cb47a37e4e9 353 Gene3D G3DSA:3.40.50.80 202 341 2.1E-32 T 01-11-2018 IPR039261 Ferredoxin-NADP reductase (FNR), nucleotide-binding domain CDA09_10430 c613510762e8d9e1dc6d2cb47a37e4e9 353 SUPERFAMILY SSF54292 1 88 8.52E-27 T 01-11-2018 IPR036010 2Fe-2S ferredoxin-like superfamily GO:0009055|GO:0051536 CDA09_07485 262f3cc485cea0e7e602b3149f93df10 518 Gene3D G3DSA:3.20.20.140 64 475 4.1E-84 T 01-11-2018 CDA09_07485 262f3cc485cea0e7e602b3149f93df10 518 Gene3D G3DSA:3.10.310.70 82 192 4.1E-84 T 01-11-2018 CDA09_07485 262f3cc485cea0e7e602b3149f93df10 518 Gene3D G3DSA:2.30.40.10 24 488 4.1E-84 T 01-11-2018 IPR011059 Metal-dependent hydrolase, composite domain superfamily GO:0016810 CDA09_07485 262f3cc485cea0e7e602b3149f93df10 518 SUPERFAMILY SSF51556 63 476 1.02E-26 T 01-11-2018 IPR032466 Metal-dependent hydrolase CDA09_07485 262f3cc485cea0e7e602b3149f93df10 518 SUPERFAMILY SSF51338 24 516 8.1E-18 T 01-11-2018 IPR011059 Metal-dependent hydrolase, composite domain superfamily GO:0016810 CDA09_07485 262f3cc485cea0e7e602b3149f93df10 518 Pfam PF07969 Amidohydrolase family 53 515 1.2E-59 T 01-11-2018 IPR013108 Amidohydrolase 3 CDA09_18545 a077190ca99e523d46621da3bee55228 266 SUPERFAMILY SSF110399 9 251 6.8E-88 T 01-11-2018 CDA09_18545 a077190ca99e523d46621da3bee55228 266 Gene3D G3DSA:3.20.20.70 1 266 3.3E-116 T 01-11-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 CDA09_18545 a077190ca99e523d46621da3bee55228 266 Pfam PF05690 Thiazole biosynthesis protein ThiG 13 260 4.4E-106 T 01-11-2018 IPR033983 Thiazole synthase ThiG KEGG: 00730+2.8.1.10|MetaCyc: PWY-6891|MetaCyc: PWY-6892 CDA09_18545 a077190ca99e523d46621da3bee55228 266 Hamap MF_00443 Thiazole synthase [thiG]. 10 266 41.95 T 01-11-2018 IPR008867 Thiazole synthase GO:0009228 KEGG: 00730+2.8.1.10|MetaCyc: PWY-6891|MetaCyc: PWY-6892 CDA09_13750 e7d181424c1e16313627d0a0d8e03969 313 SUPERFAMILY SSF56349 27 302 1.5E-35 T 01-11-2018 IPR011010 DNA breaking-rejoining enzyme, catalytic core GO:0003677 CDA09_13750 e7d181424c1e16313627d0a0d8e03969 313 Pfam PF00589 Phage integrase family 107 291 1.8E-19 T 01-11-2018 IPR002104 Integrase, catalytic domain GO:0003677|GO:0006310|GO:0015074 CDA09_13750 e7d181424c1e16313627d0a0d8e03969 313 Gene3D G3DSA:1.10.443.10 96 310 8.3E-32 T 01-11-2018 IPR013762 Integrase-like, catalytic domain superfamily GO:0003677|GO:0006310|GO:0015074 CDA09_13775 e7d181424c1e16313627d0a0d8e03969 313 SUPERFAMILY SSF56349 27 302 1.5E-35 T 01-11-2018 IPR011010 DNA breaking-rejoining enzyme, catalytic core GO:0003677 CDA09_13775 e7d181424c1e16313627d0a0d8e03969 313 Pfam PF00589 Phage integrase family 107 291 1.8E-19 T 01-11-2018 IPR002104 Integrase, catalytic domain GO:0003677|GO:0006310|GO:0015074 CDA09_13775 e7d181424c1e16313627d0a0d8e03969 313 Gene3D G3DSA:1.10.443.10 96 310 8.3E-32 T 01-11-2018 IPR013762 Integrase-like, catalytic domain superfamily GO:0003677|GO:0006310|GO:0015074 CDA09_12570 1876360e749769513aa700e788a73633 155 PRINTS PR01438 Universal stress protein signature 131 153 1.9E-13 T 01-11-2018 IPR006015 Universal stress protein A CDA09_12570 1876360e749769513aa700e788a73633 155 PRINTS PR01438 Universal stress protein signature 113 125 1.9E-13 T 01-11-2018 IPR006015 Universal stress protein A CDA09_12570 1876360e749769513aa700e788a73633 155 PRINTS PR01438 Universal stress protein signature 2 20 1.9E-13 T 01-11-2018 IPR006015 Universal stress protein A CDA09_12570 1876360e749769513aa700e788a73633 155 Pfam PF00582 Universal stress protein family 1 153 2.0E-27 T 01-11-2018 IPR006016 UspA CDA09_12570 1876360e749769513aa700e788a73633 155 Gene3D G3DSA:3.40.50.620 1 153 2.5E-32 T 01-11-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold CDA09_12570 1876360e749769513aa700e788a73633 155 SUPERFAMILY SSF52402 1 154 5.27E-32 T 01-11-2018 CDA09_01930 1286f50d0f2afcb7e05579803a02ad53 264 Gene3D G3DSA:2.60.40.420 111 253 2.0E-59 T 01-11-2018 IPR008972 Cupredoxin CDA09_01930 1286f50d0f2afcb7e05579803a02ad53 264 SUPERFAMILY SSF49503 111 255 7.25E-42 T 01-11-2018 IPR008972 Cupredoxin CDA09_01930 1286f50d0f2afcb7e05579803a02ad53 264 ProSitePatterns PS00078 CO II and nitrous oxide reductase dinuclear copper centers signature. 188 236 - T 01-11-2018 IPR001505 Copper centre Cu(A) GO:0005507 Reactome: R-HSA-5628897|Reactome: R-HSA-611105 CDA09_01930 1286f50d0f2afcb7e05579803a02ad53 264 Gene3D G3DSA:1.10.287.90 42 110 2.0E-59 T 01-11-2018 IPR036257 Cytochrome C oxidase subunit II, transmembrane domain superfamily Reactome: R-HSA-5628897|Reactome: R-HSA-611105 CDA09_01930 1286f50d0f2afcb7e05579803a02ad53 264 PRINTS PR01166 Cytochrome c oxidase subunit II signature 187 207 3.2E-7 T 01-11-2018 CDA09_01930 1286f50d0f2afcb7e05579803a02ad53 264 PRINTS PR01166 Cytochrome c oxidase subunit II signature 225 242 3.2E-7 T 01-11-2018 CDA09_01930 1286f50d0f2afcb7e05579803a02ad53 264 PRINTS PR01166 Cytochrome c oxidase subunit II signature 111 130 3.2E-7 T 01-11-2018 CDA09_01930 1286f50d0f2afcb7e05579803a02ad53 264 Pfam PF00116 Cytochrome C oxidase subunit II, periplasmic domain 117 237 2.1E-14 T 01-11-2018 IPR002429 Cytochrome c oxidase subunit II-like C-terminal GO:0004129|GO:0005507|GO:0016020 Reactome: R-HSA-5628897|Reactome: R-HSA-611105 CDA09_01930 1286f50d0f2afcb7e05579803a02ad53 264 SUPERFAMILY SSF81464 23 104 5.01E-5 T 01-11-2018 IPR036257 Cytochrome C oxidase subunit II, transmembrane domain superfamily Reactome: R-HSA-5628897|Reactome: R-HSA-611105 CDA09_21565 f7cd33ef1d70b8f757be87d955bc6f48 822 Pfam PF04101 Glycosyltransferase family 28 C-terminal domain 242 350 1.8E-7 T 01-11-2018 IPR007235 Glycosyl transferase, family 28, C-terminal GO:0016758 KEGG: 00550+2.4.1.227|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471|Reactome: R-HSA-446193|Reactome: R-HSA-5633231 CDA09_21565 f7cd33ef1d70b8f757be87d955bc6f48 822 SUPERFAMILY SSF53756 102 378 6.28E-24 T 01-11-2018 CDA09_21565 f7cd33ef1d70b8f757be87d955bc6f48 822 Pfam PF06925 Monogalactosyldiacylglycerol (MGDG) synthase 21 189 1.2E-14 T 01-11-2018 IPR009695 Diacylglycerol glucosyltransferase, N-terminal GO:0009247|GO:0016758 CDA09_21565 f7cd33ef1d70b8f757be87d955bc6f48 822 Gene3D G3DSA:3.40.50.2000 196 366 9.5E-25 T 01-11-2018 CDA09_05280 554a481e9f29570c14b1f9bfe21e3d4f 138 SMART SM00450 35 132 5.9E-31 T 01-11-2018 IPR001763 Rhodanese-like domain CDA09_05280 554a481e9f29570c14b1f9bfe21e3d4f 138 SUPERFAMILY SSF52821 15 135 1.11E-34 T 01-11-2018 IPR036873 Rhodanese-like domain superfamily CDA09_05280 554a481e9f29570c14b1f9bfe21e3d4f 138 Gene3D G3DSA:3.40.250.10 37 138 9.5E-31 T 01-11-2018 IPR036873 Rhodanese-like domain superfamily CDA09_05280 554a481e9f29570c14b1f9bfe21e3d4f 138 Pfam PF00581 Rhodanese-like domain 39 128 3.6E-20 T 01-11-2018 IPR001763 Rhodanese-like domain CDA09_04265 e7071a347ed186b040c4b68442ddd31c 256 PRINTS PR00164 ABC-2 type transport system membrane protein signature 58 80 2.1E-8 T 01-11-2018 IPR000412 ABC-2 transporter GO:0016021|GO:0043190|GO:0055085 CDA09_04265 e7071a347ed186b040c4b68442ddd31c 256 PRINTS PR00164 ABC-2 type transport system membrane protein signature 176 195 2.1E-8 T 01-11-2018 IPR000412 ABC-2 transporter GO:0016021|GO:0043190|GO:0055085 CDA09_04265 e7071a347ed186b040c4b68442ddd31c 256 PRINTS PR00164 ABC-2 type transport system membrane protein signature 196 215 2.1E-8 T 01-11-2018 IPR000412 ABC-2 transporter GO:0016021|GO:0043190|GO:0055085 CDA09_04265 e7071a347ed186b040c4b68442ddd31c 256 PIRSF PIRSF006648 5 253 8.5E-19 T 01-11-2018 IPR000412 ABC-2 transporter GO:0016021|GO:0043190|GO:0055085 CDA09_04265 e7071a347ed186b040c4b68442ddd31c 256 Pfam PF01061 ABC-2 type transporter 9 219 7.8E-34 T 01-11-2018 IPR013525 ABC-2 type transporter GO:0016020 Reactome: R-HSA-1369062 CDA09_14485 e298b70fc047649165ca3fd99e7d6398 580 Gene3D G3DSA:3.40.50.300 343 579 8.1E-61 T 01-11-2018 CDA09_14485 e298b70fc047649165ca3fd99e7d6398 580 Pfam PF00664 ABC transporter transmembrane region 28 284 4.5E-16 T 01-11-2018 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0016021|GO:0042626|GO:0055085 CDA09_14485 e298b70fc047649165ca3fd99e7d6398 580 SMART SM00382 367 551 2.7E-14 T 01-11-2018 IPR003593 AAA+ ATPase domain CDA09_14485 e298b70fc047649165ca3fd99e7d6398 580 SUPERFAMILY SSF90123 16 320 1.11E-38 T 01-11-2018 IPR036640 ABC transporter type 1, transmembrane domain superfamily GO:0005524|GO:0016021 CDA09_14485 e298b70fc047649165ca3fd99e7d6398 580 Pfam PF00005 ABC transporter 362 505 4.0E-25 T 01-11-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 CDA09_14485 e298b70fc047649165ca3fd99e7d6398 580 ProSitePatterns PS00211 ABC transporters family signature. 479 493 - T 01-11-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 CDA09_14485 e298b70fc047649165ca3fd99e7d6398 580 SUPERFAMILY SSF52540 345 573 7.43E-55 T 01-11-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CDA09_14485 e298b70fc047649165ca3fd99e7d6398 580 Gene3D G3DSA:1.20.1560.10 12 320 9.0E-37 T 01-11-2018 IPR036640 ABC transporter type 1, transmembrane domain superfamily GO:0005524|GO:0016021 CDA09_17455 dab33138b36f3ff1fd947e65e1b826cb 119 Pfam PF00453 Ribosomal protein L20 3 109 1.7E-49 T 01-11-2018 IPR005813 Ribosomal protein L20 GO:0003735|GO:0005622|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 CDA09_17455 dab33138b36f3ff1fd947e65e1b826cb 119 Gene3D G3DSA:1.10.720.90 2 55 3.1E-26 T 01-11-2018 CDA09_17455 dab33138b36f3ff1fd947e65e1b826cb 119 Hamap MF_00382 50S ribosomal protein L20 [rplT]. 2 115 30.001 T 01-11-2018 IPR005813 Ribosomal protein L20 GO:0003735|GO:0005622|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 CDA09_17455 dab33138b36f3ff1fd947e65e1b826cb 119 PRINTS PR00062 Ribosomal protein L20 signature 12 41 6.5E-41 T 01-11-2018 IPR005813 Ribosomal protein L20 GO:0003735|GO:0005622|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 CDA09_17455 dab33138b36f3ff1fd947e65e1b826cb 119 PRINTS PR00062 Ribosomal protein L20 signature 75 101 6.5E-41 T 01-11-2018 IPR005813 Ribosomal protein L20 GO:0003735|GO:0005622|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 CDA09_17455 dab33138b36f3ff1fd947e65e1b826cb 119 PRINTS PR00062 Ribosomal protein L20 signature 42 71 6.5E-41 T 01-11-2018 IPR005813 Ribosomal protein L20 GO:0003735|GO:0005622|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 CDA09_17455 dab33138b36f3ff1fd947e65e1b826cb 119 ProDom PD002389 RIBOSOMAL RRNA-BINDING RNA-BINDING RIBONUCLEOPROTEIN L20 50S L20 CHLOROPLAST BACTERIAL ORGANELLE 21 71 3.0E-14 T 01-11-2018 CDA09_17455 dab33138b36f3ff1fd947e65e1b826cb 119 Gene3D G3DSA:1.10.1900.20 56 119 3.9E-27 T 01-11-2018 IPR035566 Ribosomal protein L20, C-terminal Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 CDA09_17455 dab33138b36f3ff1fd947e65e1b826cb 119 ProSitePatterns PS00937 Ribosomal protein L20 signature. 54 70 - T 01-11-2018 IPR005813 Ribosomal protein L20 GO:0003735|GO:0005622|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 CDA09_17455 dab33138b36f3ff1fd947e65e1b826cb 119 SUPERFAMILY SSF74731 2 115 2.75E-49 T 01-11-2018 IPR035566 Ribosomal protein L20, C-terminal Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 CDA09_17455 dab33138b36f3ff1fd947e65e1b826cb 119 TIGRFAM TIGR01032 rplT_bact: ribosomal protein bL20 1 113 1.1E-49 T 01-11-2018 IPR005813 Ribosomal protein L20 GO:0003735|GO:0005622|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 CDA09_08745 b0fc09652a97ba478d2a64510b938e3e 263 Gene3D G3DSA:1.20.910.10 19 257 1.2E-66 T 01-11-2018 IPR016084 Haem oxygenase-like, multi-helical Reactome: R-HSA-189483|Reactome: R-HSA-917937 CDA09_08745 b0fc09652a97ba478d2a64510b938e3e 263 Pfam PF03070 TENA/THI-4/PQQC family 29 247 4.1E-56 T 01-11-2018 IPR004305 Thiaminase-2/PQQC CDA09_08745 b0fc09652a97ba478d2a64510b938e3e 263 TIGRFAM TIGR02111 PQQ_syn_pqqC: coenzyme PQQ biosynthesis protein C 22 254 2.7E-102 T 01-11-2018 IPR011845 Coenzyme PQQ biosynthesis protein C GO:0018189|GO:0055114 MetaCyc: PWY-6420 CDA09_08745 b0fc09652a97ba478d2a64510b938e3e 263 SUPERFAMILY SSF48613 20 252 1.75E-70 T 01-11-2018 IPR016084 Haem oxygenase-like, multi-helical Reactome: R-HSA-189483|Reactome: R-HSA-917937 CDA09_08745 b0fc09652a97ba478d2a64510b938e3e 263 Hamap MF_00654 Pyrroloquinoline-quinone synthase [pqqC]. 1 263 125.767 T 01-11-2018 IPR011845 Coenzyme PQQ biosynthesis protein C GO:0018189|GO:0055114 MetaCyc: PWY-6420 CDA09_17665 848e0ff040935d2cb441ff54625c7ada 452 Pfam PF02978 Signal peptide binding domain 329 428 2.9E-31 T 01-11-2018 IPR004125 Signal recognition particle, SRP54 subunit, M-domain GO:0006614|GO:0008312|GO:0048500 Reactome: R-HSA-1799339 CDA09_17665 848e0ff040935d2cb441ff54625c7ada 452 TIGRFAM TIGR00959 ffh: signal recognition particle protein 3 430 1.8E-172 T 01-11-2018 IPR004780 Signal recognition particle protein Ffh GO:0003924|GO:0005525|GO:0006614|GO:0048500 CDA09_17665 848e0ff040935d2cb441ff54625c7ada 452 ProSitePatterns PS00300 SRP54-type proteins GTP-binding domain signature. 269 282 - T 01-11-2018 IPR000897 Signal recognition particle, SRP54 subunit, GTPase domain GO:0005525|GO:0006614 Reactome: R-HSA-1799339 CDA09_17665 848e0ff040935d2cb441ff54625c7ada 452 SMART SM00382 99 270 2.0E-7 T 01-11-2018 IPR003593 AAA+ ATPase domain CDA09_17665 848e0ff040935d2cb441ff54625c7ada 452 SMART SM00962 100 296 3.1E-111 T 01-11-2018 IPR000897 Signal recognition particle, SRP54 subunit, GTPase domain GO:0005525|GO:0006614 Reactome: R-HSA-1799339 CDA09_17665 848e0ff040935d2cb441ff54625c7ada 452 SMART SM00963 1 86 3.3E-35 T 01-11-2018 IPR013822 Signal recognition particle, SRP54 subunit, helical bundle GO:0005525|GO:0006614 Reactome: R-HSA-1799339 CDA09_17665 848e0ff040935d2cb441ff54625c7ada 452 Pfam PF02881 SRP54-type protein, helical bundle domain 5 82 3.9E-21 T 01-11-2018 IPR013822 Signal recognition particle, SRP54 subunit, helical bundle GO:0005525|GO:0006614 Reactome: R-HSA-1799339 CDA09_17665 848e0ff040935d2cb441ff54625c7ada 452 SUPERFAMILY SSF47446 329 431 5.07E-34 T 01-11-2018 IPR036891 Signal recognition particle, SRP54 subunit, M-domain superfamily GO:0006614|GO:0008312|GO:0048500 Reactome: R-HSA-1799339 CDA09_17665 848e0ff040935d2cb441ff54625c7ada 452 Pfam PF00448 SRP54-type protein, GTPase domain 100 296 1.7E-71 T 01-11-2018 IPR000897 Signal recognition particle, SRP54 subunit, GTPase domain GO:0005525|GO:0006614 Reactome: R-HSA-1799339 CDA09_17665 848e0ff040935d2cb441ff54625c7ada 452 Gene3D G3DSA:1.10.260.30 328 450 1.5E-41 T 01-11-2018 IPR036891 Signal recognition particle, SRP54 subunit, M-domain superfamily GO:0006614|GO:0008312|GO:0048500 Reactome: R-HSA-1799339 CDA09_17665 848e0ff040935d2cb441ff54625c7ada 452 Gene3D G3DSA:1.20.120.140 4 305 4.8E-122 T 01-11-2018 CDA09_17665 848e0ff040935d2cb441ff54625c7ada 452 SUPERFAMILY SSF52540 42 357 1.91E-53 T 01-11-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CDA09_17665 848e0ff040935d2cb441ff54625c7ada 452 Gene3D G3DSA:3.40.50.300 90 285 4.8E-122 T 01-11-2018 CDA09_17665 848e0ff040935d2cb441ff54625c7ada 452 Hamap MF_00306 Signal recognition particle 54 kDa protein [srp54]. 5 440 32.986 T 01-11-2018 IPR022941 Signal recognition particle, SRP54 subunit GO:0003924|GO:0005525|GO:0006614|GO:0048500 Reactome: R-HSA-1799339 CDA09_02990 4e30760e09ed3dca8e2474140c1683fe 103 TIGRFAM TIGR00061 L21: ribosomal protein bL21 2 101 2.2E-38 T 01-11-2018 IPR001787 Ribosomal protein L21 GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 CDA09_02990 4e30760e09ed3dca8e2474140c1683fe 103 Pfam PF00829 Ribosomal prokaryotic L21 protein 1 101 6.2E-42 T 01-11-2018 IPR028909 Ribosomal protein L21-like GO:0005840 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 CDA09_02990 4e30760e09ed3dca8e2474140c1683fe 103 ProSitePatterns PS01169 Ribosomal protein L21 signature. 72 94 - T 01-11-2018 IPR018258 Ribosomal protein L21, conserved site GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 CDA09_02990 4e30760e09ed3dca8e2474140c1683fe 103 SUPERFAMILY SSF141091 1 102 1.15E-39 T 01-11-2018 IPR036164 L21-like superfamily Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 CDA09_02990 4e30760e09ed3dca8e2474140c1683fe 103 Hamap MF_01363 50S ribosomal protein L21 [rplU]. 1 103 27.76 T 01-11-2018 IPR001787 Ribosomal protein L21 GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 CDA09_17445 3972a4e8ad98416b610ecd946d0aa4b0 792 SUPERFAMILY SSF46955 403 474 1.01E-18 T 01-11-2018 IPR009061 Putative DNA-binding domain superfamily CDA09_17445 3972a4e8ad98416b610ecd946d0aa4b0 792 SMART SM00873 211 384 2.3E-90 T 01-11-2018 IPR005146 B3/B4 tRNA-binding domain GO:0003723|GO:0004826 KEGG: 00970+6.1.1.20 CDA09_17445 3972a4e8ad98416b610ecd946d0aa4b0 792 SUPERFAMILY SSF50249 38 194 1.44E-48 T 01-11-2018 IPR012340 Nucleic acid-binding, OB-fold CDA09_17445 3972a4e8ad98416b610ecd946d0aa4b0 792 Pfam PF03483 B3/4 domain 211 384 1.0E-67 T 01-11-2018 IPR005146 B3/B4 tRNA-binding domain GO:0003723|GO:0004826 KEGG: 00970+6.1.1.20 CDA09_17445 3972a4e8ad98416b610ecd946d0aa4b0 792 SMART SM00874 402 470 2.8E-25 T 01-11-2018 IPR005147 tRNA synthetase, B5-domain GO:0000287|GO:0003723|GO:0005524|GO:0006432 KEGG: 00970+6.1.1.20|Reactome: R-HSA-379716 CDA09_17445 3972a4e8ad98416b610ecd946d0aa4b0 792 Pfam PF03147 Ferredoxin-fold anticodon binding domain 698 791 6.5E-28 T 01-11-2018 IPR005121 Ferrodoxin-fold anticodon-binding domain KEGG: 00970+6.1.1.20 CDA09_17445 3972a4e8ad98416b610ecd946d0aa4b0 792 Pfam PF01588 Putative tRNA binding domain 45 144 3.2E-24 T 01-11-2018 IPR002547 tRNA-binding domain GO:0000049 Reactome: R-HSA-379716 CDA09_17445 3972a4e8ad98416b610ecd946d0aa4b0 792 Gene3D G3DSA:3.30.930.10 487 689 7.9E-55 T 01-11-2018 CDA09_17445 3972a4e8ad98416b610ecd946d0aa4b0 792 SUPERFAMILY SSF54991 693 791 7.59E-28 T 01-11-2018 IPR036690 Ferrodoxin-fold anticodon-binding domain superfamily KEGG: 00970+6.1.1.20 CDA09_17445 3972a4e8ad98416b610ecd946d0aa4b0 792 Gene3D G3DSA:3.30.56.10 402 475 3.1E-25 T 01-11-2018 CDA09_17445 3972a4e8ad98416b610ecd946d0aa4b0 792 SUPERFAMILY SSF56037 195 396 1.23E-69 T 01-11-2018 CDA09_17445 3972a4e8ad98416b610ecd946d0aa4b0 792 Gene3D G3DSA:3.50.40.10 196 394 5.9E-75 T 01-11-2018 IPR020825 Phenylalanyl-tRNA synthetase, B3/B4 KEGG: 00970+6.1.1.20 CDA09_17445 3972a4e8ad98416b610ecd946d0aa4b0 792 Pfam PF03484 tRNA synthetase B5 domain 405 470 8.0E-19 T 01-11-2018 IPR005147 tRNA synthetase, B5-domain GO:0000287|GO:0003723|GO:0005524|GO:0006432 KEGG: 00970+6.1.1.20|Reactome: R-HSA-379716 CDA09_17445 3972a4e8ad98416b610ecd946d0aa4b0 792 SMART SM00896 698 791 1.7E-38 T 01-11-2018 IPR005121 Ferrodoxin-fold anticodon-binding domain KEGG: 00970+6.1.1.20 CDA09_17445 3972a4e8ad98416b610ecd946d0aa4b0 792 Hamap MF_00283 Phenylalanine--tRNA ligase beta subunit [pheT]. 1 785 44.221 T 01-11-2018 IPR004532 Phenylalanine-tRNA ligase, class IIc, beta subunit GO:0000287|GO:0004826|GO:0005524|GO:0005737|GO:0006432 KEGG: 00970+6.1.1.20 CDA09_17445 3972a4e8ad98416b610ecd946d0aa4b0 792 Gene3D G3DSA:3.30.56.10 4 180 6.2E-69 T 01-11-2018 CDA09_17445 3972a4e8ad98416b610ecd946d0aa4b0 792 Gene3D G3DSA:2.40.50.140 39 153 6.2E-69 T 01-11-2018 CDA09_17445 3972a4e8ad98416b610ecd946d0aa4b0 792 SUPERFAMILY SSF55681 466 687 1.54E-46 T 01-11-2018 CDA09_17445 3972a4e8ad98416b610ecd946d0aa4b0 792 Gene3D G3DSA:3.30.70.380 699 791 7.7E-28 T 01-11-2018 IPR036690 Ferrodoxin-fold anticodon-binding domain superfamily KEGG: 00970+6.1.1.20 CDA09_17445 3972a4e8ad98416b610ecd946d0aa4b0 792 TIGRFAM TIGR00472 pheT_bact: phenylalanine--tRNA ligase, beta subunit 1 791 5.7E-239 T 01-11-2018 IPR004532 Phenylalanine-tRNA ligase, class IIc, beta subunit GO:0000287|GO:0004826|GO:0005524|GO:0005737|GO:0006432 KEGG: 00970+6.1.1.20 CDA09_17775 a06c7ec0334b94ae6ac0a994287ed979 302 Gene3D G3DSA:1.10.357.140 26 190 4.3E-18 T 01-11-2018 CDA09_17775 a06c7ec0334b94ae6ac0a994287ed979 302 ProSitePatterns PS00943 UbiA prenyltransferase family signature. 73 95 - T 01-11-2018 IPR030470 UbiA prenyltransferase conserved site CDA09_17775 a06c7ec0334b94ae6ac0a994287ed979 302 Pfam PF01040 UbiA prenyltransferase family 34 282 1.8E-64 T 01-11-2018 IPR000537 UbiA prenyltransferase family GO:0016021|GO:0016765 CDA09_17775 a06c7ec0334b94ae6ac0a994287ed979 302 TIGRFAM TIGR01473 cyoE_ctaB: protoheme IX farnesyltransferase 20 297 1.4E-95 T 01-11-2018 IPR006369 Protohaem IX farnesyltransferase GO:0008495|GO:0016021|GO:0048034 Reactome: R-HSA-189451 CDA09_17775 a06c7ec0334b94ae6ac0a994287ed979 302 Hamap MF_00154 Protoheme IX farnesyltransferase [cyoE]. 17 299 19.585 T 01-11-2018 IPR006369 Protohaem IX farnesyltransferase GO:0008495|GO:0016021|GO:0048034 Reactome: R-HSA-189451 CDA09_01250 7b456b5820d0bbc0e740db20370ac715 217 SUPERFAMILY SSF52172 6 135 3.98E-34 T 01-11-2018 IPR011006 CheY-like superfamily CDA09_01250 7b456b5820d0bbc0e740db20370ac715 217 SMART SM00421 152 209 2.2E-24 T 01-11-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 CDA09_01250 7b456b5820d0bbc0e740db20370ac715 217 SMART SM00448 6 119 6.5E-31 T 01-11-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 CDA09_01250 7b456b5820d0bbc0e740db20370ac715 217 Pfam PF00072 Response regulator receiver domain 8 119 5.7E-28 T 01-11-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 CDA09_01250 7b456b5820d0bbc0e740db20370ac715 217 ProSitePatterns PS00622 LuxR-type HTH domain signature. 169 196 - T 01-11-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 CDA09_01250 7b456b5820d0bbc0e740db20370ac715 217 SUPERFAMILY SSF46894 147 212 4.42E-20 T 01-11-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 CDA09_01250 7b456b5820d0bbc0e740db20370ac715 217 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 169 185 1.7E-13 T 01-11-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 CDA09_01250 7b456b5820d0bbc0e740db20370ac715 217 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 155 169 1.7E-13 T 01-11-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 CDA09_01250 7b456b5820d0bbc0e740db20370ac715 217 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 185 197 1.7E-13 T 01-11-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 CDA09_01250 7b456b5820d0bbc0e740db20370ac715 217 Gene3D G3DSA:3.40.50.12740 7 213 1.8E-65 T 01-11-2018 CDA09_01250 7b456b5820d0bbc0e740db20370ac715 217 Pfam PF00196 Bacterial regulatory proteins, luxR family 155 209 1.9E-21 T 01-11-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 CDA09_05155 6c933bacabe63c261a83fee3969f82a5 394 Hamap MF_00145 Phosphoglycerate kinase [pgk]. 5 390 38.395 T 01-11-2018 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 CDA09_05155 6c933bacabe63c261a83fee3969f82a5 394 Pfam PF00162 Phosphoglycerate kinase 8 380 1.6E-137 T 01-11-2018 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 CDA09_05155 6c933bacabe63c261a83fee3969f82a5 394 PIRSF PIRSF000724 1 394 6.7E-137 T 01-11-2018 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 CDA09_05155 6c933bacabe63c261a83fee3969f82a5 394 SUPERFAMILY SSF53748 4 390 9.89E-140 T 01-11-2018 IPR036043 Phosphoglycerate kinase superfamily GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 CDA09_05155 6c933bacabe63c261a83fee3969f82a5 394 Gene3D G3DSA:3.40.50.1260 167 380 2.5E-144 T 01-11-2018 IPR015824 Phosphoglycerate kinase, N-terminal GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 CDA09_05155 6c933bacabe63c261a83fee3969f82a5 394 ProSitePatterns PS00111 Phosphoglycerate kinase signature. 15 25 - T 01-11-2018 IPR015911 Phosphoglycerate kinase, conserved site GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 CDA09_05155 6c933bacabe63c261a83fee3969f82a5 394 PRINTS PR00477 Phosphoglycerate kinase family signature 310 335 6.3E-81 T 01-11-2018 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 CDA09_05155 6c933bacabe63c261a83fee3969f82a5 394 PRINTS PR00477 Phosphoglycerate kinase family signature 134 156 6.3E-81 T 01-11-2018 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 CDA09_05155 6c933bacabe63c261a83fee3969f82a5 394 PRINTS PR00477 Phosphoglycerate kinase family signature 366 383 6.3E-81 T 01-11-2018 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 CDA09_05155 6c933bacabe63c261a83fee3969f82a5 394 PRINTS PR00477 Phosphoglycerate kinase family signature 165 187 6.3E-81 T 01-11-2018 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 CDA09_05155 6c933bacabe63c261a83fee3969f82a5 394 PRINTS PR00477 Phosphoglycerate kinase family signature 32 54 6.3E-81 T 01-11-2018 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 CDA09_05155 6c933bacabe63c261a83fee3969f82a5 394 PRINTS PR00477 Phosphoglycerate kinase family signature 188 207 6.3E-81 T 01-11-2018 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 CDA09_05155 6c933bacabe63c261a83fee3969f82a5 394 PRINTS PR00477 Phosphoglycerate kinase family signature 10 26 6.3E-81 T 01-11-2018 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 CDA09_05155 6c933bacabe63c261a83fee3969f82a5 394 PRINTS PR00477 Phosphoglycerate kinase family signature 106 121 6.3E-81 T 01-11-2018 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 CDA09_05155 6c933bacabe63c261a83fee3969f82a5 394 PRINTS PR00477 Phosphoglycerate kinase family signature 343 354 6.3E-81 T 01-11-2018 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 CDA09_05155 6c933bacabe63c261a83fee3969f82a5 394 Gene3D G3DSA:3.40.50.1260 9 388 2.5E-144 T 01-11-2018 IPR015824 Phosphoglycerate kinase, N-terminal GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 CDA09_06900 e8ee9d4dbb155f4e78ef3fa6543d9ee9 587 Gene3D G3DSA:2.40.50.100 3 82 4.0E-21 T 01-11-2018 CDA09_06900 e8ee9d4dbb155f4e78ef3fa6543d9ee9 587 Gene3D G3DSA:3.50.50.60 115 448 7.1E-123 T 01-11-2018 IPR036188 FAD/NAD(P)-binding domain superfamily CDA09_06900 e8ee9d4dbb155f4e78ef3fa6543d9ee9 587 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 380 394 3.6E-69 T 01-11-2018 CDA09_06900 e8ee9d4dbb155f4e78ef3fa6543d9ee9 587 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 458 479 3.6E-69 T 01-11-2018 CDA09_06900 e8ee9d4dbb155f4e78ef3fa6543d9ee9 587 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 545 565 3.6E-69 T 01-11-2018 CDA09_06900 e8ee9d4dbb155f4e78ef3fa6543d9ee9 587 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 423 430 3.6E-69 T 01-11-2018 CDA09_06900 e8ee9d4dbb155f4e78ef3fa6543d9ee9 587 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 291 316 3.6E-69 T 01-11-2018 CDA09_06900 e8ee9d4dbb155f4e78ef3fa6543d9ee9 587 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 115 137 3.6E-69 T 01-11-2018 CDA09_06900 e8ee9d4dbb155f4e78ef3fa6543d9ee9 587 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 523 538 3.6E-69 T 01-11-2018 CDA09_06900 e8ee9d4dbb155f4e78ef3fa6543d9ee9 587 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 148 163 3.6E-69 T 01-11-2018 CDA09_06900 e8ee9d4dbb155f4e78ef3fa6543d9ee9 587 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 256 265 3.6E-69 T 01-11-2018 CDA09_06900 e8ee9d4dbb155f4e78ef3fa6543d9ee9 587 ProSitePatterns PS00189 2-oxo acid dehydrogenases acyltransferase component lipoyl binding site. 27 56 - T 01-11-2018 IPR003016 2-oxo acid dehydrogenase, lipoyl-binding site Reactome: R-HSA-389661 CDA09_06900 e8ee9d4dbb155f4e78ef3fa6543d9ee9 587 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 291 309 2.8E-37 T 01-11-2018 CDA09_06900 e8ee9d4dbb155f4e78ef3fa6543d9ee9 587 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 116 135 2.8E-37 T 01-11-2018 CDA09_06900 e8ee9d4dbb155f4e78ef3fa6543d9ee9 587 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 379 395 2.8E-37 T 01-11-2018 CDA09_06900 e8ee9d4dbb155f4e78ef3fa6543d9ee9 587 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 253 271 2.8E-37 T 01-11-2018 CDA09_06900 e8ee9d4dbb155f4e78ef3fa6543d9ee9 587 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 408 430 2.8E-37 T 01-11-2018 CDA09_06900 e8ee9d4dbb155f4e78ef3fa6543d9ee9 587 PIRSF PIRSF000350 30 580 4.3E-81 T 01-11-2018 IPR001100 Pyridine nucleotide-disulphide oxidoreductase, class I GO:0009055|GO:0016491 CDA09_06900 e8ee9d4dbb155f4e78ef3fa6543d9ee9 587 Gene3D G3DSA:3.30.390.30 461 582 2.3E-47 T 01-11-2018 IPR016156 FAD/NAD-linked reductase, dimerisation domain superfamily GO:0016491|GO:0050660|GO:0055114 CDA09_06900 e8ee9d4dbb155f4e78ef3fa6543d9ee9 587 ProSitePatterns PS00076 Pyridine nucleotide-disulphide oxidoreductases class-I active site. 149 159 - T 01-11-2018 IPR012999 Pyridine nucleotide-disulphide oxidoreductase, class I, active site GO:0016668|GO:0055114 CDA09_06900 e8ee9d4dbb155f4e78ef3fa6543d9ee9 587 TIGRFAM TIGR01350 lipoamide_DH: dihydrolipoyl dehydrogenase 114 577 3.9E-147 T 01-11-2018 IPR006258 Dihydrolipoamide dehydrogenase GO:0004148|GO:0050660|GO:0055114 KEGG: 00010+1.8.1.4|KEGG: 00020+1.8.1.4|KEGG: 00260+1.8.1.4|KEGG: 00280+1.8.1.4|KEGG: 00620+1.8.1.4|KEGG: 00640+1.8.1.4|MetaCyc: PWY-5046|MetaCyc: PWY-5084|Reactome: R-HSA-204174|Reactome: R-HSA-389661|Reactome: R-HSA-5362517|Reactome: R-HSA-6783984|Reactome: R-HSA-70268|Reactome: R-HSA-70895|Reactome: R-HSA-71064|Reactome: R-HSA-71403 CDA09_06900 e8ee9d4dbb155f4e78ef3fa6543d9ee9 587 SUPERFAMILY SSF51905 111 453 1.23E-52 T 01-11-2018 IPR036188 FAD/NAD(P)-binding domain superfamily CDA09_06900 e8ee9d4dbb155f4e78ef3fa6543d9ee9 587 Gene3D G3DSA:3.50.50.60 268 389 7.1E-123 T 01-11-2018 IPR036188 FAD/NAD(P)-binding domain superfamily CDA09_06900 e8ee9d4dbb155f4e78ef3fa6543d9ee9 587 SUPERFAMILY SSF55424 458 580 3.95E-40 T 01-11-2018 IPR016156 FAD/NAD-linked reductase, dimerisation domain superfamily GO:0016491|GO:0050660|GO:0055114 CDA09_06900 e8ee9d4dbb155f4e78ef3fa6543d9ee9 587 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 115 443 2.5E-57 T 01-11-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 CDA09_06900 e8ee9d4dbb155f4e78ef3fa6543d9ee9 587 SUPERFAMILY SSF51230 2 96 1.06E-23 T 01-11-2018 IPR011053 Single hybrid motif CDA09_06900 e8ee9d4dbb155f4e78ef3fa6543d9ee9 587 Pfam PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain 462 569 1.1E-36 T 01-11-2018 IPR004099 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain GO:0045454|GO:0055114 CDA09_06900 e8ee9d4dbb155f4e78ef3fa6543d9ee9 587 Pfam PF00364 Biotin-requiring enzyme 5 75 6.1E-20 T 01-11-2018 IPR000089 Biotin/lipoyl attachment CDA09_00175 79eb7e7e1f0eb55b52a06a2e39f3518b 238 Pfam PF00849 RNA pseudouridylate synthase 62 193 1.9E-12 T 01-11-2018 IPR006145 Pseudouridine synthase, RsuA/RluB/C/D/E/F GO:0001522|GO:0003723|GO:0009451|GO:0009982 CDA09_00175 79eb7e7e1f0eb55b52a06a2e39f3518b 238 Gene3D G3DSA:3.10.290.10 1 59 3.9E-8 T 01-11-2018 IPR036986 RNA-binding S4 domain superfamily GO:0003723 CDA09_00175 79eb7e7e1f0eb55b52a06a2e39f3518b 238 TIGRFAM TIGR00093 TIGR00093: pseudouridine synthase 66 224 4.6E-36 T 01-11-2018 IPR000748 Pseudouridine synthase, RsuA/RluB/E/F GO:0001522|GO:0003723|GO:0009451|GO:0016866 CDA09_00175 79eb7e7e1f0eb55b52a06a2e39f3518b 238 Gene3D G3DSA:3.30.70.580 62 227 1.4E-44 T 01-11-2018 CDA09_00175 79eb7e7e1f0eb55b52a06a2e39f3518b 238 Gene3D G3DSA:3.30.70.1560 129 210 1.4E-44 T 01-11-2018 CDA09_00175 79eb7e7e1f0eb55b52a06a2e39f3518b 238 SUPERFAMILY SSF55120 47 230 1.03E-35 T 01-11-2018 IPR020103 Pseudouridine synthase, catalytic domain superfamily GO:0001522|GO:0003723|GO:0009451|GO:0009982 CDA09_00175 79eb7e7e1f0eb55b52a06a2e39f3518b 238 Pfam PF01479 S4 domain 6 38 4.1E-6 T 01-11-2018 IPR002942 RNA-binding S4 domain GO:0003723 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 CDA09_00175 79eb7e7e1f0eb55b52a06a2e39f3518b 238 SUPERFAMILY SSF55174 4 67 1.08E-6 T 01-11-2018 CDA09_02620 ddd18e91fa875d297def17abd838326a 500 Gene3D G3DSA:3.30.70.270 325 493 6.7E-42 T 01-11-2018 CDA09_02620 ddd18e91fa875d297def17abd838326a 500 Pfam PF00990 Diguanylate cyclase, GGDEF domain 331 486 1.4E-38 T 01-11-2018 IPR000160 GGDEF domain CDA09_02620 ddd18e91fa875d297def17abd838326a 500 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 328 486 3.8E-32 T 01-11-2018 IPR000160 GGDEF domain CDA09_02620 ddd18e91fa875d297def17abd838326a 500 SMART SM00267 320 492 5.3E-43 T 01-11-2018 IPR000160 GGDEF domain CDA09_02620 ddd18e91fa875d297def17abd838326a 500 SUPERFAMILY SSF55073 336 486 2.75E-37 T 01-11-2018 IPR029787 Nucleotide cyclase CDA09_02620 ddd18e91fa875d297def17abd838326a 500 Pfam PF07695 7TM diverse intracellular signalling 69 266 2.2E-23 T 01-11-2018 IPR011623 7TM-DISM receptor, extracellular domain, type 1 CDA09_16745 c507a98ec85d77785a905d978cd8dfe0 223 SUPERFAMILY SSF46785 152 218 1.21E-13 T 01-11-2018 IPR036390 Winged helix DNA-binding domain superfamily CDA09_16745 c507a98ec85d77785a905d978cd8dfe0 223 ProSitePatterns PS00889 Cyclic nucleotide-binding domain signature 2. 85 102 - T 01-11-2018 IPR018488 Cyclic nucleotide-binding, conserved site CDA09_16745 c507a98ec85d77785a905d978cd8dfe0 223 SMART SM00419 169 218 9.1E-10 T 01-11-2018 IPR012318 Crp-type HTH domain GO:0003677|GO:0006355 CDA09_16745 c507a98ec85d77785a905d978cd8dfe0 223 Gene3D G3DSA:1.10.10.10 151 217 3.3E-17 T 01-11-2018 IPR036388 Winged helix-like DNA-binding domain superfamily CDA09_16745 c507a98ec85d77785a905d978cd8dfe0 223 Pfam PF00027 Cyclic nucleotide-binding domain 36 123 5.7E-25 T 01-11-2018 IPR000595 Cyclic nucleotide-binding domain CDA09_16745 c507a98ec85d77785a905d978cd8dfe0 223 Gene3D G3DSA:2.60.120.10 8 150 1.8E-41 T 01-11-2018 IPR014710 RmlC-like jelly roll fold CDA09_16745 c507a98ec85d77785a905d978cd8dfe0 223 SMART SM00100 17 135 2.4E-30 T 01-11-2018 IPR000595 Cyclic nucleotide-binding domain CDA09_16745 c507a98ec85d77785a905d978cd8dfe0 223 Pfam PF13545 Crp-like helix-turn-helix domain 155 219 2.5E-16 T 01-11-2018 IPR012318 Crp-type HTH domain GO:0003677|GO:0006355 CDA09_16745 c507a98ec85d77785a905d978cd8dfe0 223 PRINTS PR00103 cAMP-dependent protein kinase signature 53 67 2.5E-5 T 01-11-2018 CDA09_16745 c507a98ec85d77785a905d978cd8dfe0 223 PRINTS PR00103 cAMP-dependent protein kinase signature 95 106 2.5E-5 T 01-11-2018 CDA09_16745 c507a98ec85d77785a905d978cd8dfe0 223 PRINTS PR00103 cAMP-dependent protein kinase signature 83 92 2.5E-5 T 01-11-2018 CDA09_16745 c507a98ec85d77785a905d978cd8dfe0 223 PRINTS PR00103 cAMP-dependent protein kinase signature 38 52 2.5E-5 T 01-11-2018 CDA09_16745 c507a98ec85d77785a905d978cd8dfe0 223 SUPERFAMILY SSF51206 11 150 6.94E-39 T 01-11-2018 IPR018490 Cyclic nucleotide-binding-like CDA09_16745 c507a98ec85d77785a905d978cd8dfe0 223 PRINTS PR00034 CRP bacterial regulatory protein HTH signature 192 207 1.1E-5 T 01-11-2018 IPR012318 Crp-type HTH domain GO:0003677|GO:0006355 CDA09_16745 c507a98ec85d77785a905d978cd8dfe0 223 PRINTS PR00034 CRP bacterial regulatory protein HTH signature 176 192 1.1E-5 T 01-11-2018 IPR012318 Crp-type HTH domain GO:0003677|GO:0006355 CDA09_16425 67688998669536240509dcf464387ee7 403 TIGRFAM TIGR00263 trpB: tryptophan synthase, beta subunit 15 398 2.4E-189 T 01-11-2018 IPR006654 Tryptophan synthase, beta chain GO:0004834|GO:0006568 KEGG: 00260+4.2.1.20|KEGG: 00400+4.2.1.20 CDA09_16425 67688998669536240509dcf464387ee7 403 ProSitePatterns PS00168 Tryptophan synthase beta chain pyridoxal-phosphate attachment site. 89 103 - T 01-11-2018 IPR006653 Tryptophan synthase, beta chain, conserved site GO:0004834|GO:0006568 KEGG: 00260+4.2.1.20|KEGG: 00400+4.2.1.20 CDA09_16425 67688998669536240509dcf464387ee7 403 SUPERFAMILY SSF53686 11 397 5.76E-149 T 01-11-2018 IPR036052 Tryptophan synthase beta subunit-like PLP-dependent enzyme CDA09_16425 67688998669536240509dcf464387ee7 403 Pfam PF00291 Pyridoxal-phosphate dependent enzyme 61 386 2.6E-49 T 01-11-2018 IPR001926 Pyridoxal-phosphate dependent enzyme CDA09_16425 67688998669536240509dcf464387ee7 403 Hamap MF_00133 Tryptophan synthase beta chain [trpB]. 10 399 51.681 T 01-11-2018 IPR023026 Tryptophan synthase beta chain/beta chain-like GO:0000162|GO:0004834 KEGG: 00260+4.2.1.20|KEGG: 00400+4.2.1.20 CDA09_16425 67688998669536240509dcf464387ee7 403 Gene3D G3DSA:3.40.50.1100 18 214 1.7E-184 T 01-11-2018 CDA09_16425 67688998669536240509dcf464387ee7 403 Gene3D G3DSA:3.40.50.1100 62 392 1.7E-184 T 01-11-2018 CDA09_16425 67688998669536240509dcf464387ee7 403 PIRSF PIRSF001413 1 403 3.9E-161 T 01-11-2018 IPR023026 Tryptophan synthase beta chain/beta chain-like GO:0000162|GO:0004834 KEGG: 00260+4.2.1.20|KEGG: 00400+4.2.1.20 CDA09_15340 d2bfb57536e87d2c46bc20b91ba7020f 156 Gene3D G3DSA:3.40.50.2300 1 156 1.4E-54 T 01-11-2018 CDA09_15340 d2bfb57536e87d2c46bc20b91ba7020f 156 PRINTS PR00719 LMW phosphotyrosine protein phosphatase signature 4 21 4.2E-24 T 01-11-2018 IPR017867 Protein-tyrosine phosphatase, low molecular weight GO:0004725|GO:0006470 CDA09_15340 d2bfb57536e87d2c46bc20b91ba7020f 156 PRINTS PR00719 LMW phosphotyrosine protein phosphatase signature 123 138 4.2E-24 T 01-11-2018 IPR017867 Protein-tyrosine phosphatase, low molecular weight GO:0004725|GO:0006470 CDA09_15340 d2bfb57536e87d2c46bc20b91ba7020f 156 PRINTS PR00719 LMW phosphotyrosine protein phosphatase signature 81 96 4.2E-24 T 01-11-2018 IPR017867 Protein-tyrosine phosphatase, low molecular weight GO:0004725|GO:0006470 CDA09_15340 d2bfb57536e87d2c46bc20b91ba7020f 156 PRINTS PR00719 LMW phosphotyrosine protein phosphatase signature 104 117 4.2E-24 T 01-11-2018 IPR017867 Protein-tyrosine phosphatase, low molecular weight GO:0004725|GO:0006470 CDA09_15340 d2bfb57536e87d2c46bc20b91ba7020f 156 PRINTS PR00719 LMW phosphotyrosine protein phosphatase signature 47 63 4.2E-24 T 01-11-2018 IPR017867 Protein-tyrosine phosphatase, low molecular weight GO:0004725|GO:0006470 CDA09_15340 d2bfb57536e87d2c46bc20b91ba7020f 156 SMART SM00226 2 151 2.6E-45 T 01-11-2018 IPR023485 Phosphotyrosine protein phosphatase I CDA09_15340 d2bfb57536e87d2c46bc20b91ba7020f 156 SUPERFAMILY SSF52788 2 152 1.96E-50 T 01-11-2018 IPR036196 Phosphotyrosine protein phosphatase I superfamily CDA09_15340 d2bfb57536e87d2c46bc20b91ba7020f 156 Pfam PF01451 Low molecular weight phosphotyrosine protein phosphatase 4 149 4.1E-39 T 01-11-2018 IPR023485 Phosphotyrosine protein phosphatase I CDA09_10255 eac0720ac2435bd1bb003f6d61899ab5 331 Pfam PF02332 Methane/Phenol/Toluene Hydroxylase 52 274 1.6E-72 T 01-11-2018 IPR003430 Methane/phenol/toluene hydroxylase GO:0006725|GO:0055114 CDA09_10255 eac0720ac2435bd1bb003f6d61899ab5 331 Gene3D G3DSA:1.10.620.20 1 331 6.6E-117 T 01-11-2018 IPR012348 Ribonucleotide reductase-like GO:0016491|GO:0055114 Reactome: R-HSA-499943 CDA09_10255 eac0720ac2435bd1bb003f6d61899ab5 331 PIRSF PIRSF000040 1 331 1.2E-103 T 01-11-2018 IPR012078 Methane/phenol monooxygenase, hydroxylase component GO:0016709|GO:0055114 CDA09_10255 eac0720ac2435bd1bb003f6d61899ab5 331 SUPERFAMILY SSF47240 1 330 1.49E-116 T 01-11-2018 IPR009078 Ferritin-like superfamily CDA09_00790 a618d7283c4b09a65269ba19b950d581 212 SUPERFAMILY SSF53335 1 207 1.48E-51 T 01-11-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase CDA09_00790 a618d7283c4b09a65269ba19b950d581 212 Gene3D G3DSA:3.40.50.150 1 211 5.0E-57 T 01-11-2018 CDA09_00790 a618d7283c4b09a65269ba19b950d581 212 Hamap MF_00812 Thiopurine S-methyltransferase [tpm]. 1 211 38.518 T 01-11-2018 IPR025835 Thiopurine S-methyltransferase GO:0008119 KEGG: 00983+2.1.1.67|Reactome: R-HSA-156581|Reactome: R-HSA-5578995 CDA09_00790 a618d7283c4b09a65269ba19b950d581 212 Pfam PF05724 Thiopurine S-methyltransferase (TPMT) 1 192 1.8E-59 T 01-11-2018 IPR008854 TPMT family GO:0008757 KEGG: 00983+2.1.1.67|Reactome: R-HSA-156581|Reactome: R-HSA-5578995 CDA09_00790 a618d7283c4b09a65269ba19b950d581 212 TIGRFAM TIGR03840 TMPT_Se_Te: thiopurine S-methyltransferase, Se/Te detoxification family 4 210 3.2E-78 T 01-11-2018 IPR022474 Thiopurine S-methyltransferase, Se/Te detoxification GO:0008119|GO:0010038|GO:0032259 KEGG: 00983+2.1.1.67 CDA09_00790 a618d7283c4b09a65269ba19b950d581 212 PIRSF PIRSF023956 1 212 4.4E-77 T 01-11-2018 IPR025835 Thiopurine S-methyltransferase GO:0008119 KEGG: 00983+2.1.1.67|Reactome: R-HSA-156581|Reactome: R-HSA-5578995 CDA09_02270 5f0729bc6702eca1c785a7f661912bb9 381 Gene3D G3DSA:1.20.140.10 236 381 6.6E-60 T 01-11-2018 CDA09_02270 5f0729bc6702eca1c785a7f661912bb9 381 Pfam PF02770 Acyl-CoA dehydrogenase, middle domain 120 219 3.6E-26 T 01-11-2018 IPR006091 Acyl-CoA oxidase/dehydrogenase, central domain GO:0016627|GO:0055114 CDA09_02270 5f0729bc6702eca1c785a7f661912bb9 381 Pfam PF00441 Acyl-CoA dehydrogenase, C-terminal domain 231 379 8.9E-54 T 01-11-2018 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal GO:0016627|GO:0055114 CDA09_02270 5f0729bc6702eca1c785a7f661912bb9 381 SUPERFAMILY SSF56645 2 242 1.31E-84 T 01-11-2018 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain superfamily GO:0016627|GO:0055114 CDA09_02270 5f0729bc6702eca1c785a7f661912bb9 381 ProSitePatterns PS00073 Acyl-CoA dehydrogenases signature 2. 338 357 - T 01-11-2018 IPR006089 Acyl-CoA dehydrogenase, conserved site GO:0003995|GO:0055114 CDA09_02270 5f0729bc6702eca1c785a7f661912bb9 381 SUPERFAMILY SSF47203 230 379 1.93E-61 T 01-11-2018 IPR036250 Acyl-CoA dehydrogenase-like, C-terminal GO:0016627|GO:0055114 CDA09_02270 5f0729bc6702eca1c785a7f661912bb9 381 PIRSF PIRSF016578 216 380 1.2E-13 T 01-11-2018 CDA09_02270 5f0729bc6702eca1c785a7f661912bb9 381 PIRSF PIRSF016578 2 188 7.4E-12 T 01-11-2018 CDA09_02270 5f0729bc6702eca1c785a7f661912bb9 381 Pfam PF02771 Acyl-CoA dehydrogenase, N-terminal domain 4 116 2.0E-37 T 01-11-2018 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal GO:0016627|GO:0050660|GO:0055114 CDA09_02270 5f0729bc6702eca1c785a7f661912bb9 381 Gene3D G3DSA:2.40.110.10 119 235 3.7E-43 T 01-11-2018 CDA09_02270 5f0729bc6702eca1c785a7f661912bb9 381 Gene3D G3DSA:1.10.540.10 1 118 4.2E-44 T 01-11-2018 IPR037069 Acyl-CoA dehydrogenase/oxidase, N-terminal domain superfamily GO:0016627|GO:0050660|GO:0055114 CDA09_08965 f0ebd5b45d74f8e5ad446e69a00f0506 433 SUPERFAMILY SSF56349 117 410 1.35E-36 T 01-11-2018 IPR011010 DNA breaking-rejoining enzyme, catalytic core GO:0003677 CDA09_08965 f0ebd5b45d74f8e5ad446e69a00f0506 433 Gene3D G3DSA:1.10.150.130 111 215 7.5E-11 T 01-11-2018 IPR010998 Integrase/recombinase, N-terminal CDA09_08965 f0ebd5b45d74f8e5ad446e69a00f0506 433 Pfam PF00589 Phage integrase family 256 407 1.7E-9 T 01-11-2018 IPR002104 Integrase, catalytic domain GO:0003677|GO:0006310|GO:0015074 CDA09_08965 f0ebd5b45d74f8e5ad446e69a00f0506 433 Gene3D G3DSA:1.10.443.10 245 419 1.6E-18 T 01-11-2018 IPR013762 Integrase-like, catalytic domain superfamily GO:0003677|GO:0006310|GO:0015074 CDA09_21480 fd4a60e2f5aa2cb915d92328c2926b64 244 Pfam PF07729 FCD domain 104 231 1.2E-20 T 01-11-2018 IPR011711 GntR, C-terminal CDA09_21480 fd4a60e2f5aa2cb915d92328c2926b64 244 SUPERFAMILY SSF48008 98 239 6.28E-18 T 01-11-2018 IPR008920 Transcription regulator FadR/GntR, C-terminal CDA09_21480 fd4a60e2f5aa2cb915d92328c2926b64 244 SMART SM00895 102 232 4.2E-13 T 01-11-2018 IPR011711 GntR, C-terminal CDA09_21480 fd4a60e2f5aa2cb915d92328c2926b64 244 Pfam PF00392 Bacterial regulatory proteins, gntR family 31 92 2.6E-15 T 01-11-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 CDA09_21480 fd4a60e2f5aa2cb915d92328c2926b64 244 SMART SM00345 34 92 1.0E-15 T 01-11-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 CDA09_21480 fd4a60e2f5aa2cb915d92328c2926b64 244 Gene3D G3DSA:1.10.10.10 20 93 2.4E-16 T 01-11-2018 IPR036388 Winged helix-like DNA-binding domain superfamily CDA09_21480 fd4a60e2f5aa2cb915d92328c2926b64 244 Gene3D G3DSA:1.20.120.530 96 241 6.2E-24 T 01-11-2018 IPR008920 Transcription regulator FadR/GntR, C-terminal CDA09_21480 fd4a60e2f5aa2cb915d92328c2926b64 244 SUPERFAMILY SSF46785 26 96 7.13E-17 T 01-11-2018 IPR036390 Winged helix DNA-binding domain superfamily CDA09_19985 bfa8e273cfc8b365e3fb4bd6130b3b74 287 Pfam PF16976 Flp pilus assembly protein RcpC/CpaB 104 213 1.8E-31 T 01-11-2018 IPR031571 Flp pilus assembly protein RcpC/CpaB domain CDA09_19985 bfa8e273cfc8b365e3fb4bd6130b3b74 287 TIGRFAM TIGR03177 pilus_cpaB: Flp pilus assembly protein CpaB 7 283 3.6E-80 T 01-11-2018 IPR017592 Pilus assembly, Flp-type CpaB CDA09_19985 bfa8e273cfc8b365e3fb4bd6130b3b74 287 Pfam PF08666 SAF domain 37 97 2.1E-6 T 01-11-2018 IPR013974 SAF domain Reactome: R-HSA-4085001 CDA09_19985 bfa8e273cfc8b365e3fb4bd6130b3b74 287 SMART SM00858 36 98 2.1E-8 T 01-11-2018 IPR013974 SAF domain Reactome: R-HSA-4085001 CDA09_19855 71fb59914ea1510aca7e1ae41f2a1146 249 Gene3D G3DSA:1.20.910.10 5 208 1.6E-17 T 01-11-2018 IPR016084 Haem oxygenase-like, multi-helical Reactome: R-HSA-189483|Reactome: R-HSA-917937 CDA09_19855 71fb59914ea1510aca7e1ae41f2a1146 249 SUPERFAMILY SSF48613 14 186 1.84E-8 T 01-11-2018 IPR016084 Haem oxygenase-like, multi-helical Reactome: R-HSA-189483|Reactome: R-HSA-917937 CDA09_09960 7e1759b716bcaa0a86415f15031a9e3d 333 SUPERFAMILY SSF55347 155 293 9.81E-60 T 01-11-2018 CDA09_09960 7e1759b716bcaa0a86415f15031a9e3d 333 SMART SM00859 5 120 4.7E-5 T 01-11-2018 IPR000534 Semialdehyde dehydrogenase, NAD-binding GO:0016620|GO:0051287|GO:0055114 CDA09_09960 7e1759b716bcaa0a86415f15031a9e3d 333 SUPERFAMILY SSF51735 1 179 1.82E-24 T 01-11-2018 IPR036291 NAD(P)-binding domain superfamily CDA09_09960 7e1759b716bcaa0a86415f15031a9e3d 333 Gene3D G3DSA:3.40.50.720 1 122 2.0E-49 T 01-11-2018 CDA09_09960 7e1759b716bcaa0a86415f15031a9e3d 333 Gene3D G3DSA:3.30.360.10 155 298 3.9E-76 T 01-11-2018 CDA09_09960 7e1759b716bcaa0a86415f15031a9e3d 333 Pfam PF09290 Prokaryotic acetaldehyde dehydrogenase, dimerisation 155 292 2.5E-65 T 01-11-2018 IPR015426 Acetaldehyde dehydrogenase, C-terminal GO:0008774|GO:0019439|GO:0055114 KEGG: 00360+1.2.1.10|KEGG: 00362+1.2.1.10|KEGG: 00620+1.2.1.10|KEGG: 00621+1.2.1.10|KEGG: 00622+1.2.1.10|KEGG: 00650+1.2.1.10|MetaCyc: PWY-5162|MetaCyc: PWY-5436|MetaCyc: PWY-5480|MetaCyc: PWY-6587|MetaCyc: PWY-7085|MetaCyc: PWY-7180 CDA09_09960 7e1759b716bcaa0a86415f15031a9e3d 333 Hamap MF_01657 Acetaldehyde dehydrogenase [mhpF]. 1 333 144.133 T 01-11-2018 IPR003361 Acetaldehyde dehydrogenase GO:0008774|GO:0019439|GO:0055114 KEGG: 00360+1.2.1.10|KEGG: 00362+1.2.1.10|KEGG: 00620+1.2.1.10|KEGG: 00621+1.2.1.10|KEGG: 00622+1.2.1.10|KEGG: 00650+1.2.1.10|MetaCyc: PWY-5162|MetaCyc: PWY-5436|MetaCyc: PWY-5480|MetaCyc: PWY-6587|MetaCyc: PWY-7085|MetaCyc: PWY-7180 CDA09_09960 7e1759b716bcaa0a86415f15031a9e3d 333 Pfam PF01118 Semialdehyde dehydrogenase, NAD binding domain 6 113 7.3E-10 T 01-11-2018 IPR000534 Semialdehyde dehydrogenase, NAD-binding GO:0016620|GO:0051287|GO:0055114 CDA09_09960 7e1759b716bcaa0a86415f15031a9e3d 333 TIGRFAM TIGR03215 ac_ald_DH_ac: acetaldehyde dehydrogenase (acetylating) 146 317 1.3E-90 T 01-11-2018 IPR003361 Acetaldehyde dehydrogenase GO:0008774|GO:0019439|GO:0055114 KEGG: 00360+1.2.1.10|KEGG: 00362+1.2.1.10|KEGG: 00620+1.2.1.10|KEGG: 00621+1.2.1.10|KEGG: 00622+1.2.1.10|KEGG: 00650+1.2.1.10|MetaCyc: PWY-5162|MetaCyc: PWY-5436|MetaCyc: PWY-5480|MetaCyc: PWY-6587|MetaCyc: PWY-7085|MetaCyc: PWY-7180 CDA09_09960 7e1759b716bcaa0a86415f15031a9e3d 333 Gene3D G3DSA:3.40.50.720 145 310 3.9E-76 T 01-11-2018 CDA09_09960 7e1759b716bcaa0a86415f15031a9e3d 333 PIRSF PIRSF015689 1 122 1.1E-45 T 01-11-2018 IPR003361 Acetaldehyde dehydrogenase GO:0008774|GO:0019439|GO:0055114 KEGG: 00360+1.2.1.10|KEGG: 00362+1.2.1.10|KEGG: 00620+1.2.1.10|KEGG: 00621+1.2.1.10|KEGG: 00622+1.2.1.10|KEGG: 00650+1.2.1.10|MetaCyc: PWY-5162|MetaCyc: PWY-5436|MetaCyc: PWY-5480|MetaCyc: PWY-6587|MetaCyc: PWY-7085|MetaCyc: PWY-7180 CDA09_09960 7e1759b716bcaa0a86415f15031a9e3d 333 PIRSF PIRSF015689 139 322 5.4E-82 T 01-11-2018 IPR003361 Acetaldehyde dehydrogenase GO:0008774|GO:0019439|GO:0055114 KEGG: 00360+1.2.1.10|KEGG: 00362+1.2.1.10|KEGG: 00620+1.2.1.10|KEGG: 00621+1.2.1.10|KEGG: 00622+1.2.1.10|KEGG: 00650+1.2.1.10|MetaCyc: PWY-5162|MetaCyc: PWY-5436|MetaCyc: PWY-5480|MetaCyc: PWY-6587|MetaCyc: PWY-7085|MetaCyc: PWY-7180 CDA09_08400 95f6ec436a73078d5491aac7ef28d547 132 SUPERFAMILY SSF53146 1 118 2.88E-32 T 01-11-2018 IPR036105 Dinitrogenase iron-molybdenum cofactor biosynthesis superfamily CDA09_08400 95f6ec436a73078d5491aac7ef28d547 132 Gene3D G3DSA:3.30.420.130 1 119 6.3E-32 T 01-11-2018 IPR036105 Dinitrogenase iron-molybdenum cofactor biosynthesis superfamily CDA09_08400 95f6ec436a73078d5491aac7ef28d547 132 TIGRFAM TIGR02663 nifX: nitrogen fixation protein NifX 1 119 9.4E-51 T 01-11-2018 IPR013480 Nitrogen fixation protein NifX GO:0009399|GO:0051188|GO:0051540 CDA09_08400 95f6ec436a73078d5491aac7ef28d547 132 Pfam PF02579 Dinitrogenase iron-molybdenum cofactor 12 104 2.2E-17 T 01-11-2018 IPR003731 Dinitrogenase iron-molybdenum cofactor biosynthesis CDA09_01235 c09a7e1f400bcfd13cf72f608817ce9d 467 SUPERFAMILY SSF82771 202 279 3.53E-9 T 01-11-2018 IPR035901 GIY-YIG endonuclease superfamily Reactome: R-HSA-5693568|Reactome: R-HSA-6783310 CDA09_01235 c09a7e1f400bcfd13cf72f608817ce9d 467 Gene3D G3DSA:3.30.420.10 4 168 1.2E-43 T 01-11-2018 IPR036397 Ribonuclease H superfamily GO:0003676 CDA09_01235 c09a7e1f400bcfd13cf72f608817ce9d 467 TIGRFAM TIGR00573 dnaq: exonuclease, DNA polymerase III, epsilon subunit family 6 161 1.4E-27 T 01-11-2018 IPR006054 DNA polymerase III epsilon subunit, exonuclease domain GO:0003677|GO:0003887|GO:0006260 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 CDA09_01235 c09a7e1f400bcfd13cf72f608817ce9d 467 SMART SM00465 202 282 1.8E-4 T 01-11-2018 IPR000305 GIY-YIG endonuclease CDA09_01235 c09a7e1f400bcfd13cf72f608817ce9d 467 SMART SM00479 6 171 3.7E-37 T 01-11-2018 IPR013520 Exonuclease, RNase T/DNA polymerase III CDA09_01235 c09a7e1f400bcfd13cf72f608817ce9d 467 Pfam PF00929 Exonuclease 8 157 2.4E-29 T 01-11-2018 IPR013520 Exonuclease, RNase T/DNA polymerase III CDA09_01235 c09a7e1f400bcfd13cf72f608817ce9d 467 Gene3D G3DSA:3.40.1440.10 191 284 9.9E-16 T 01-11-2018 IPR035901 GIY-YIG endonuclease superfamily Reactome: R-HSA-5693568|Reactome: R-HSA-6783310 CDA09_01235 c09a7e1f400bcfd13cf72f608817ce9d 467 SUPERFAMILY SSF53098 4 179 2.98E-52 T 01-11-2018 IPR012337 Ribonuclease H-like superfamily CDA09_00465 b58bd6dfc7dc49dd7d08c12c35b71f0b 276 ProSitePatterns PS00449 ATP synthase a subunit signature. 205 214 - T 01-11-2018 IPR023011 ATP synthase, F0 complex, subunit A, active site Reactome: R-HSA-163210|Reactome: R-HSA-8949613 CDA09_00465 b58bd6dfc7dc49dd7d08c12c35b71f0b 276 Hamap MF_01393 ATP synthase subunit a [atpB]. 9 276 13.77 T 01-11-2018 IPR000568 ATP synthase, F0 complex, subunit A GO:0015078|GO:0015986|GO:0045263 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 CDA09_00465 b58bd6dfc7dc49dd7d08c12c35b71f0b 276 Pfam PF00119 ATP synthase A chain 41 269 1.7E-52 T 01-11-2018 IPR000568 ATP synthase, F0 complex, subunit A GO:0015078|GO:0015986|GO:0045263 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 CDA09_00465 b58bd6dfc7dc49dd7d08c12c35b71f0b 276 TIGRFAM TIGR01131 ATP_synt_6_or_A: ATP synthase F0, A subunit 33 271 7.1E-39 T 01-11-2018 IPR000568 ATP synthase, F0 complex, subunit A GO:0015078|GO:0015986|GO:0045263 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 CDA09_00465 b58bd6dfc7dc49dd7d08c12c35b71f0b 276 SUPERFAMILY SSF81336 93 270 1.07E-38 T 01-11-2018 IPR035908 ATP synthase, F0 complex, subunit A superfamily Reactome: R-HSA-163210|Reactome: R-HSA-8949613 CDA09_00465 b58bd6dfc7dc49dd7d08c12c35b71f0b 276 Gene3D G3DSA:1.20.120.220 91 276 2.3E-52 T 01-11-2018 IPR035908 ATP synthase, F0 complex, subunit A superfamily Reactome: R-HSA-163210|Reactome: R-HSA-8949613 CDA09_00345 0b1548ffd1c1d9b123e88a692710d8aa 968 Gene3D G3DSA:3.40.228.10 206 404 9.3E-133 T 01-11-2018 CDA09_00345 0b1548ffd1c1d9b123e88a692710d8aa 968 Pfam PF01568 Molydopterin dinucleotide binding domain 834 961 8.5E-20 T 01-11-2018 IPR006657 Molybdopterin dinucleotide-binding domain GO:0016491|GO:0043546|GO:0055114 CDA09_00345 0b1548ffd1c1d9b123e88a692710d8aa 968 SUPERFAMILY SSF50692 805 968 2.71E-38 T 01-11-2018 IPR009010 Aspartate decarboxylase-like domain superfamily CDA09_00345 0b1548ffd1c1d9b123e88a692710d8aa 968 Pfam PF04879 Molybdopterin oxidoreductase Fe4S4 domain 74 123 1.3E-11 T 01-11-2018 IPR006963 Molybdopterin oxidoreductase, 4Fe-4S domain GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 CDA09_00345 0b1548ffd1c1d9b123e88a692710d8aa 968 SMART SM00926 72 126 1.3E-13 T 01-11-2018 IPR006963 Molybdopterin oxidoreductase, 4Fe-4S domain GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 CDA09_00345 0b1548ffd1c1d9b123e88a692710d8aa 968 SUPERFAMILY SSF53706 72 658 3.4E-204 T 01-11-2018 CDA09_00345 0b1548ffd1c1d9b123e88a692710d8aa 968 Gene3D G3DSA:2.20.25.90 74 125 1.3E-11 T 01-11-2018 CDA09_00345 0b1548ffd1c1d9b123e88a692710d8aa 968 Gene3D G3DSA:2.40.40.20 781 968 1.8E-44 T 01-11-2018 CDA09_00345 0b1548ffd1c1d9b123e88a692710d8aa 968 Pfam PF00384 Molybdopterin oxidoreductase 129 577 2.7E-59 T 01-11-2018 IPR006656 Molybdopterin oxidoreductase GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 CDA09_00345 0b1548ffd1c1d9b123e88a692710d8aa 968 PIRSF PIRSF036643 798 967 5.9E-16 T 01-11-2018 CDA09_00345 0b1548ffd1c1d9b123e88a692710d8aa 968 PIRSF PIRSF036643 36 591 1.1E-115 T 01-11-2018 CDA09_00345 0b1548ffd1c1d9b123e88a692710d8aa 968 ProSitePatterns PS00551 Prokaryotic molybdopterin oxidoreductases signature 1. 77 94 - T 01-11-2018 IPR027467 Molybdopterin oxidoreductase, molybdopterin cofactor binding site GO:0051539 CDA09_00345 0b1548ffd1c1d9b123e88a692710d8aa 968 Gene3D G3DSA:3.40.50.740 138 627 9.3E-133 T 01-11-2018 CDA09_17340 2021f8ae7a3cb059bdf5e3e34e55bbed 379 Pfam PF01312 FlhB HrpN YscU SpaS Family 8 347 3.0E-128 T 01-11-2018 IPR006135 Type III secretion system substrate exporter GO:0009306|GO:0016020 CDA09_17340 2021f8ae7a3cb059bdf5e3e34e55bbed 379 TIGRFAM TIGR00328 flhB: flagellar biosynthetic protein FlhB 8 353 3.6E-131 T 01-11-2018 IPR006136 Flagellar biosynthetic protein FlhB GO:0015031|GO:0016021|GO:0044780 CDA09_17340 2021f8ae7a3cb059bdf5e3e34e55bbed 379 Gene3D G3DSA:3.40.1690.10 218 357 9.7E-59 T 01-11-2018 IPR029025 Type III secretion system substrate exporter, C-terminal CDA09_17340 2021f8ae7a3cb059bdf5e3e34e55bbed 379 PRINTS PR00950 Type III secretion system inner membrane S protein family signature 272 287 3.5E-41 T 01-11-2018 IPR006135 Type III secretion system substrate exporter GO:0009306|GO:0016020 CDA09_17340 2021f8ae7a3cb059bdf5e3e34e55bbed 379 PRINTS PR00950 Type III secretion system inner membrane S protein family signature 302 323 3.5E-41 T 01-11-2018 IPR006135 Type III secretion system substrate exporter GO:0009306|GO:0016020 CDA09_17340 2021f8ae7a3cb059bdf5e3e34e55bbed 379 PRINTS PR00950 Type III secretion system inner membrane S protein family signature 10 32 3.5E-41 T 01-11-2018 IPR006135 Type III secretion system substrate exporter GO:0009306|GO:0016020 CDA09_17340 2021f8ae7a3cb059bdf5e3e34e55bbed 379 PRINTS PR00950 Type III secretion system inner membrane S protein family signature 208 226 3.5E-41 T 01-11-2018 IPR006135 Type III secretion system substrate exporter GO:0009306|GO:0016020 CDA09_17340 2021f8ae7a3cb059bdf5e3e34e55bbed 379 PRINTS PR00950 Type III secretion system inner membrane S protein family signature 228 245 3.5E-41 T 01-11-2018 IPR006135 Type III secretion system substrate exporter GO:0009306|GO:0016020 CDA09_17340 2021f8ae7a3cb059bdf5e3e34e55bbed 379 SUPERFAMILY SSF160544 250 355 1.96E-41 T 01-11-2018 IPR029025 Type III secretion system substrate exporter, C-terminal CDA09_14725 eda1c275519f17da1e52bc4d3c935a4f 617 Pfam PF00501 AMP-binding enzyme 47 456 1.5E-56 T 01-11-2018 IPR000873 AMP-dependent synthetase/ligase GO:0003824 CDA09_14725 eda1c275519f17da1e52bc4d3c935a4f 617 Gene3D G3DSA:3.40.50.12780 36 457 7.3E-65 T 01-11-2018 CDA09_14725 eda1c275519f17da1e52bc4d3c935a4f 617 SUPERFAMILY SSF56801 34 486 2.09E-76 T 01-11-2018 CDA09_20695 689356505af0b7ed209f2421ce3c43f8 220 PIRSF PIRSF000370 9 220 1.8E-70 T 01-11-2018 IPR024924 7-carboxy-7-deazaguanine synthase-like KEGG: 00790+4.3.99.3|MetaCyc: PWY-6703 CDA09_20695 689356505af0b7ed209f2421ce3c43f8 220 TIGRFAM TIGR04349 rSAM_QueE_gams: putative 7-cyano-7-deazaguanosine (preQ0) biosynthesis protein QueE 11 220 2.1E-108 T 01-11-2018 IPR027621 Putative 7-cyano-7-deazaguanosine (preQ0) biosynthesis protein QueE CDA09_20695 689356505af0b7ed209f2421ce3c43f8 220 Pfam PF04055 Radical SAM superfamily 34 116 2.0E-13 T 01-11-2018 IPR007197 Radical SAM GO:0003824|GO:0051536 CDA09_20695 689356505af0b7ed209f2421ce3c43f8 220 Hamap MF_00917 7-carboxy-7-deazaguanine synthase [queE]. 11 217 36.73 T 01-11-2018 IPR024924 7-carboxy-7-deazaguanine synthase-like KEGG: 00790+4.3.99.3|MetaCyc: PWY-6703 CDA09_20695 689356505af0b7ed209f2421ce3c43f8 220 Gene3D G3DSA:3.20.20.70 10 214 4.6E-38 T 01-11-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 CDA09_20695 689356505af0b7ed209f2421ce3c43f8 220 Pfam PF13394 4Fe-4S single cluster domain 32 114 3.0E-10 T 01-11-2018 CDA09_20695 689356505af0b7ed209f2421ce3c43f8 220 SUPERFAMILY SSF102114 32 111 8.89E-15 T 01-11-2018 CDA09_21835 7ca7fe68f51b05eb67707f9d770e163f 397 Gene3D G3DSA:3.40.50.2300 154 371 5.1E-113 T 01-11-2018 CDA09_21835 7ca7fe68f51b05eb67707f9d770e163f 397 SUPERFAMILY SSF53822 37 392 1.62E-91 T 01-11-2018 IPR028082 Periplasmic binding protein-like I CDA09_21835 7ca7fe68f51b05eb67707f9d770e163f 397 Gene3D G3DSA:3.40.50.2300 38 365 5.1E-113 T 01-11-2018 CDA09_21835 7ca7fe68f51b05eb67707f9d770e163f 397 Pfam PF13458 Periplasmic binding protein 36 376 6.3E-74 T 01-11-2018 IPR028081 Leucine-binding protein domain CDA09_21835 7ca7fe68f51b05eb67707f9d770e163f 397 TIGRFAM TIGR01409 TAT_signal_seq: Tat (twin-arginine translocation) pathway signal sequence 7 24 0.0012 T 01-11-2018 IPR019546 Twin-arginine translocation pathway, signal sequence, bacterial/archaeal CDA09_14935 e4f0e7ae9f9a8d48df2c4f3163b85de6 64 Gene3D G3DSA:1.10.10.600 1 64 8.8E-29 T 01-11-2018 IPR036762 IscX-like superfamily CDA09_14935 e4f0e7ae9f9a8d48df2c4f3163b85de6 64 PIRSF PIRSF039003 1 64 2.0E-33 T 01-11-2018 IPR007479 ISC system FeS cluster assembly, IscX GO:0016226 CDA09_14935 e4f0e7ae9f9a8d48df2c4f3163b85de6 64 Pfam PF04384 Iron-sulphur cluster assembly 1 63 1.6E-31 T 01-11-2018 IPR007479 ISC system FeS cluster assembly, IscX GO:0016226 CDA09_14935 e4f0e7ae9f9a8d48df2c4f3163b85de6 64 TIGRFAM TIGR03412 iscX_yfhJ: FeS assembly protein IscX 2 63 4.1E-34 T 01-11-2018 IPR007479 ISC system FeS cluster assembly, IscX GO:0016226 CDA09_14935 e4f0e7ae9f9a8d48df2c4f3163b85de6 64 SUPERFAMILY SSF140319 1 62 3.01E-26 T 01-11-2018 IPR036762 IscX-like superfamily CDA09_16825 a6e52234677e8f00f5543ff6ed53b724 228 Pfam PF00027 Cyclic nucleotide-binding domain 35 123 1.4E-19 T 01-11-2018 IPR000595 Cyclic nucleotide-binding domain CDA09_16825 a6e52234677e8f00f5543ff6ed53b724 228 Pfam PF13545 Crp-like helix-turn-helix domain 155 225 3.1E-17 T 01-11-2018 IPR012318 Crp-type HTH domain GO:0003677|GO:0006355 CDA09_16825 a6e52234677e8f00f5543ff6ed53b724 228 SMART SM00100 17 135 2.5E-17 T 01-11-2018 IPR000595 Cyclic nucleotide-binding domain CDA09_16825 a6e52234677e8f00f5543ff6ed53b724 228 Gene3D G3DSA:1.10.10.10 150 227 2.9E-27 T 01-11-2018 IPR036388 Winged helix-like DNA-binding domain superfamily CDA09_16825 a6e52234677e8f00f5543ff6ed53b724 228 SUPERFAMILY SSF46785 154 226 1.63E-13 T 01-11-2018 IPR036390 Winged helix DNA-binding domain superfamily CDA09_16825 a6e52234677e8f00f5543ff6ed53b724 228 SMART SM00419 171 219 7.6E-13 T 01-11-2018 IPR012318 Crp-type HTH domain GO:0003677|GO:0006355 CDA09_16825 a6e52234677e8f00f5543ff6ed53b724 228 Gene3D G3DSA:2.60.120.10 7 149 9.2E-41 T 01-11-2018 IPR014710 RmlC-like jelly roll fold CDA09_16825 a6e52234677e8f00f5543ff6ed53b724 228 SUPERFAMILY SSF51206 12 148 9.43E-35 T 01-11-2018 IPR018490 Cyclic nucleotide-binding-like CDA09_07255 8283cf0a1544d91a7f7aa8f1dfa2c875 648 SMART SM00387 547 644 9.6E-9 T 01-11-2018 IPR003594 Histidine kinase/HSP90-like ATPase CDA09_07255 8283cf0a1544d91a7f7aa8f1dfa2c875 648 Pfam PF13185 GAF domain 287 426 2.0E-11 T 01-11-2018 IPR003018 GAF domain GO:0005515 CDA09_07255 8283cf0a1544d91a7f7aa8f1dfa2c875 648 Pfam PF07730 Histidine kinase 442 508 6.9E-16 T 01-11-2018 IPR011712 Signal transduction histidine kinase, subgroup 3, dimerisation and phosphoacceptor domain GO:0000155|GO:0000160|GO:0016021|GO:0046983 CDA09_07255 8283cf0a1544d91a7f7aa8f1dfa2c875 648 Gene3D G3DSA:1.20.1480.50 164 260 1.7E-5 T 01-11-2018 CDA09_07255 8283cf0a1544d91a7f7aa8f1dfa2c875 648 SUPERFAMILY SSF55781 267 431 1.83E-21 T 01-11-2018 CDA09_07255 8283cf0a1544d91a7f7aa8f1dfa2c875 648 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 550 641 5.9E-9 T 01-11-2018 IPR003594 Histidine kinase/HSP90-like ATPase CDA09_07255 8283cf0a1544d91a7f7aa8f1dfa2c875 648 SMART SM00304 201 253 4.5E-12 T 01-11-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 CDA09_07255 8283cf0a1544d91a7f7aa8f1dfa2c875 648 SUPERFAMILY SSF55874 516 641 1.17E-19 T 01-11-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily CDA09_07255 8283cf0a1544d91a7f7aa8f1dfa2c875 648 Pfam PF13675 Type IV pili methyl-accepting chemotaxis transducer N-term 33 132 1.1E-18 T 01-11-2018 IPR029095 NarX-like, N-terminal CDA09_07255 8283cf0a1544d91a7f7aa8f1dfa2c875 648 SUPERFAMILY SSF158472 203 251 6.93E-9 T 01-11-2018 CDA09_07255 8283cf0a1544d91a7f7aa8f1dfa2c875 648 PIRSF PIRSF003167 1 648 7.8E-187 T 01-11-2018 IPR016380 Signal transduction histidine kinase, nitrate/nitrite-sensing GO:0000155|GO:0000160|GO:0004673|GO:0016021 CDA09_07255 8283cf0a1544d91a7f7aa8f1dfa2c875 648 SMART SM00065 288 435 2.3E-8 T 01-11-2018 IPR003018 GAF domain GO:0005515 CDA09_07255 8283cf0a1544d91a7f7aa8f1dfa2c875 648 Gene3D G3DSA:3.30.450.40 262 438 2.3E-28 T 01-11-2018 IPR029016 GAF-like domain superfamily CDA09_07255 8283cf0a1544d91a7f7aa8f1dfa2c875 648 Gene3D G3DSA:3.30.565.10 509 642 2.9E-30 T 01-11-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily CDA09_07255 8283cf0a1544d91a7f7aa8f1dfa2c875 648 Pfam PF00672 HAMP domain 203 249 1.0E-8 T 01-11-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 CDA09_07255 8283cf0a1544d91a7f7aa8f1dfa2c875 648 PRINTS PR00344 Bacterial sensor protein C-terminal signature 583 597 7.1E-6 T 01-11-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 CDA09_07255 8283cf0a1544d91a7f7aa8f1dfa2c875 648 PRINTS PR00344 Bacterial sensor protein C-terminal signature 604 622 7.1E-6 T 01-11-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 CDA09_07255 8283cf0a1544d91a7f7aa8f1dfa2c875 648 PRINTS PR00344 Bacterial sensor protein C-terminal signature 628 641 7.1E-6 T 01-11-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 CDA09_02835 36237c2b2e153cce07b6d987bba0f041 468 SUPERFAMILY SSF52540 200 451 5.01E-55 T 01-11-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CDA09_02835 36237c2b2e153cce07b6d987bba0f041 468 TIGRFAM TIGR00665 DnaB: replicative DNA helicase 21 459 8.3E-177 T 01-11-2018 IPR007692 DNA helicase, DnaB type GO:0003677|GO:0003678|GO:0005524|GO:0006260 CDA09_02835 36237c2b2e153cce07b6d987bba0f041 468 Gene3D G3DSA:3.40.50.300 179 460 5.9E-105 T 01-11-2018 CDA09_02835 36237c2b2e153cce07b6d987bba0f041 468 Pfam PF00772 DnaB-like helicase N terminal domain 22 123 4.3E-35 T 01-11-2018 IPR007693 DNA helicase, DnaB-like, N-terminal GO:0003678|GO:0005524|GO:0006260 CDA09_02835 36237c2b2e153cce07b6d987bba0f041 468 SMART SM00382 219 417 3.6E-4 T 01-11-2018 IPR003593 AAA+ ATPase domain CDA09_02835 36237c2b2e153cce07b6d987bba0f041 468 SUPERFAMILY SSF48024 20 131 4.18E-37 T 01-11-2018 IPR036185 DNA helicase, DnaB-like, N-terminal domain superfamily GO:0003678|GO:0005524|GO:0006260 CDA09_02835 36237c2b2e153cce07b6d987bba0f041 468 Pfam PF03796 DnaB-like helicase C terminal domain 202 457 7.7E-113 T 01-11-2018 IPR007694 DNA helicase, DnaB-like, C-terminal GO:0003678|GO:0005524|GO:0006260 Reactome: R-HSA-2151201 CDA09_02835 36237c2b2e153cce07b6d987bba0f041 468 Gene3D G3DSA:1.10.860.10 16 178 6.8E-53 T 01-11-2018 IPR016136 DNA helicase DnaB, N-terminal/DNA primase DnaG, C-terminal CDA09_19395 d441d85989a7b01c93a56107b030b15c 326 Hamap MF_00059 DNA-directed RNA polymerase subunit alpha [rpoA]. 3 313 35.505 T 01-11-2018 IPR011773 DNA-directed RNA polymerase, alpha subunit GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 CDA09_19395 d441d85989a7b01c93a56107b030b15c 326 Pfam PF01000 RNA polymerase Rpb3/RpoA insert domain 60 151 3.2E-23 T 01-11-2018 IPR011262 DNA-directed RNA polymerase, insert domain GO:0003899|GO:0006351|GO:0046983 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 CDA09_19395 d441d85989a7b01c93a56107b030b15c 326 ProDom PD001179 RNA POLYMERASE ALPHA DNA-DIRECTED SUBUNIT CHAIN NUCLEOTIDYLTRANSFERASE TRANSFERASE TRANSCRIPTION TRANSCRIPTASE 252 322 6.0E-35 T 01-11-2018 IPR011260 RNA polymerase, alpha subunit, C-terminal GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 CDA09_19395 d441d85989a7b01c93a56107b030b15c 326 Gene3D G3DSA:2.170.120.12 51 173 1.7E-80 T 01-11-2018 IPR036643 DNA-directed RNA polymerase, insert domain superfamily KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 CDA09_19395 d441d85989a7b01c93a56107b030b15c 326 Gene3D G3DSA:3.30.1360.10 16 224 1.7E-80 T 01-11-2018 IPR036603 RNA polymerase, RBP11-like subunit GO:0006351|GO:0046983 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 CDA09_19395 d441d85989a7b01c93a56107b030b15c 326 SUPERFAMILY SSF55257 5 229 1.57E-31 T 01-11-2018 IPR036603 RNA polymerase, RBP11-like subunit GO:0006351|GO:0046983 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 CDA09_19395 d441d85989a7b01c93a56107b030b15c 326 Pfam PF03118 Bacterial RNA polymerase, alpha chain C terminal domain 247 304 2.0E-24 T 01-11-2018 IPR011260 RNA polymerase, alpha subunit, C-terminal GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 CDA09_19395 d441d85989a7b01c93a56107b030b15c 326 Pfam PF01193 RNA polymerase Rpb3/Rpb11 dimerisation domain 27 224 9.8E-24 T 01-11-2018 IPR011263 DNA-directed RNA polymerase, RpoA/D/Rpb3-type GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 CDA09_19395 d441d85989a7b01c93a56107b030b15c 326 SUPERFAMILY SSF56553 51 174 2.35E-39 T 01-11-2018 IPR036643 DNA-directed RNA polymerase, insert domain superfamily KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 CDA09_19395 d441d85989a7b01c93a56107b030b15c 326 SMART SM00662 21 230 2.9E-98 T 01-11-2018 IPR011263 DNA-directed RNA polymerase, RpoA/D/Rpb3-type GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 CDA09_19395 d441d85989a7b01c93a56107b030b15c 326 SUPERFAMILY SSF47789 247 320 1.31E-26 T 01-11-2018 CDA09_19395 d441d85989a7b01c93a56107b030b15c 326 TIGRFAM TIGR02027 rpoA: DNA-directed RNA polymerase, alpha subunit 22 312 4.6E-106 T 01-11-2018 IPR011773 DNA-directed RNA polymerase, alpha subunit GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 CDA09_19395 d441d85989a7b01c93a56107b030b15c 326 Gene3D G3DSA:1.10.150.20 241 324 1.4E-36 T 01-11-2018 CDA09_05530 5cdddb90f211c7de024de2870957bb73 205 Pfam PF03232 Ubiquinone biosynthesis protein COQ7 44 204 4.2E-42 T 01-11-2018 IPR011566 Ubiquinone biosynthesis protein Coq7 GO:0006744|GO:0055114 Reactome: R-HSA-2142789 CDA09_05530 5cdddb90f211c7de024de2870957bb73 205 Hamap MF_01658 2-nonaprenyl-3-methyl-6-methoxy-1,4-benzoquinol hydroxylase [coq7]. 5 205 30.652 T 01-11-2018 IPR011566 Ubiquinone biosynthesis protein Coq7 GO:0006744|GO:0055114 Reactome: R-HSA-2142789 CDA09_05530 5cdddb90f211c7de024de2870957bb73 205 SUPERFAMILY SSF47240 40 174 7.22E-16 T 01-11-2018 IPR009078 Ferritin-like superfamily CDA09_05530 5cdddb90f211c7de024de2870957bb73 205 Gene3D G3DSA:1.20.1260.10 36 200 1.5E-5 T 01-11-2018 IPR012347 Ferritin-like CDA09_19360 19a429de161c2014267ac5d55668c4a9 774 Pfam PF02538 Hydantoinase B/oxoprolinase 50 629 2.0E-126 T 01-11-2018 IPR003692 Hydantoinase B/oxoprolinase GO:0003824 Reactome: R-HSA-174403|Reactome: R-HSA-5578998 CDA09_10190 cfbe98430d192a0dc1b710ade7e684ba 597 SUPERFAMILY SSF55073 127 286 2.28E-51 T 01-11-2018 IPR029787 Nucleotide cyclase CDA09_10190 cfbe98430d192a0dc1b710ade7e684ba 597 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 121 283 5.2E-46 T 01-11-2018 IPR000160 GGDEF domain CDA09_10190 cfbe98430d192a0dc1b710ade7e684ba 597 Gene3D G3DSA:3.30.70.270 119 286 1.4E-58 T 01-11-2018 CDA09_10190 cfbe98430d192a0dc1b710ade7e684ba 597 SMART SM00052 294 540 7.6E-111 T 01-11-2018 IPR001633 EAL domain CDA09_10190 cfbe98430d192a0dc1b710ade7e684ba 597 Pfam PF00563 EAL domain 300 535 1.9E-75 T 01-11-2018 IPR001633 EAL domain CDA09_10190 cfbe98430d192a0dc1b710ade7e684ba 597 Gene3D G3DSA:3.20.20.450 296 550 3.3E-99 T 01-11-2018 IPR035919 EAL domain superfamily CDA09_10190 cfbe98430d192a0dc1b710ade7e684ba 597 SMART SM00267 111 284 2.3E-58 T 01-11-2018 IPR000160 GGDEF domain CDA09_10190 cfbe98430d192a0dc1b710ade7e684ba 597 Pfam PF00990 Diguanylate cyclase, GGDEF domain 122 278 3.7E-49 T 01-11-2018 IPR000160 GGDEF domain CDA09_10190 cfbe98430d192a0dc1b710ade7e684ba 597 SUPERFAMILY SSF141868 299 548 3.66E-90 T 01-11-2018 IPR035919 EAL domain superfamily CDA09_09795 38408f2c6f9a80ad38ec56f00e160a25 255 Gene3D G3DSA:3.40.50.720 1 253 2.1E-80 T 01-11-2018 CDA09_09795 38408f2c6f9a80ad38ec56f00e160a25 255 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 17 246 1.8E-60 T 01-11-2018 CDA09_09795 38408f2c6f9a80ad38ec56f00e160a25 255 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 142 170 - T 01-11-2018 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 CDA09_09795 38408f2c6f9a80ad38ec56f00e160a25 255 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 211 231 3.1E-40 T 01-11-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CDA09_09795 38408f2c6f9a80ad38ec56f00e160a25 255 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 83 94 3.1E-40 T 01-11-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CDA09_09795 38408f2c6f9a80ad38ec56f00e160a25 255 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 129 145 3.1E-40 T 01-11-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CDA09_09795 38408f2c6f9a80ad38ec56f00e160a25 255 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 176 193 3.1E-40 T 01-11-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CDA09_09795 38408f2c6f9a80ad38ec56f00e160a25 255 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 155 174 3.1E-40 T 01-11-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CDA09_09795 38408f2c6f9a80ad38ec56f00e160a25 255 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 9 26 3.1E-40 T 01-11-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CDA09_09795 38408f2c6f9a80ad38ec56f00e160a25 255 SUPERFAMILY SSF51735 1 250 2.24E-81 T 01-11-2018 IPR036291 NAD(P)-binding domain superfamily CDA09_09795 38408f2c6f9a80ad38ec56f00e160a25 255 SMART SM00822 This enzymatic domain is part of bacterial polyketide synthases and catalyses the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain. It uses NADPH to reduce the keto group to a hydroxy group. 8 190 1.6E-5 T 01-11-2018 CDA09_09795 38408f2c6f9a80ad38ec56f00e160a25 255 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 155 174 5.7E-11 T 01-11-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CDA09_09795 38408f2c6f9a80ad38ec56f00e160a25 255 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 135 143 5.7E-11 T 01-11-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CDA09_09795 38408f2c6f9a80ad38ec56f00e160a25 255 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 83 94 5.7E-11 T 01-11-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CDA09_05475 90a54880515bae3947038bb6fa8b6800 467 SUPERFAMILY SSF55874 302 464 5.24E-33 T 01-11-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily CDA09_05475 90a54880515bae3947038bb6fa8b6800 467 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 357 466 1.4E-17 T 01-11-2018 IPR003594 Histidine kinase/HSP90-like ATPase CDA09_05475 90a54880515bae3947038bb6fa8b6800 467 SMART SM00387 356 467 3.4E-28 T 01-11-2018 IPR003594 Histidine kinase/HSP90-like ATPase CDA09_05475 90a54880515bae3947038bb6fa8b6800 467 Gene3D G3DSA:1.10.287.130 191 307 1.8E-16 T 01-11-2018 CDA09_05475 90a54880515bae3947038bb6fa8b6800 467 Gene3D G3DSA:3.30.565.10 308 465 6.4E-35 T 01-11-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily CDA09_05475 90a54880515bae3947038bb6fa8b6800 467 Pfam PF00512 His Kinase A (phospho-acceptor) domain 245 304 1.4E-9 T 01-11-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 CDA09_05475 90a54880515bae3947038bb6fa8b6800 467 SMART SM00388 244 312 3.1E-9 T 01-11-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 CDA09_05475 90a54880515bae3947038bb6fa8b6800 467 PRINTS PR00344 Bacterial sensor protein C-terminal signature 428 446 2.3E-13 T 01-11-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 CDA09_05475 90a54880515bae3947038bb6fa8b6800 467 PRINTS PR00344 Bacterial sensor protein C-terminal signature 411 421 2.3E-13 T 01-11-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 CDA09_05475 90a54880515bae3947038bb6fa8b6800 467 PRINTS PR00344 Bacterial sensor protein C-terminal signature 393 407 2.3E-13 T 01-11-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 CDA09_05475 90a54880515bae3947038bb6fa8b6800 467 PRINTS PR00344 Bacterial sensor protein C-terminal signature 451 464 2.3E-13 T 01-11-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 CDA09_05475 90a54880515bae3947038bb6fa8b6800 467 SUPERFAMILY SSF47384 229 306 2.16E-12 T 01-11-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 CDA09_05475 90a54880515bae3947038bb6fa8b6800 467 SMART SM00304 191 243 4.5E-5 T 01-11-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 CDA09_16475 6eea278f2f08356f23d0b1a85e94b98a 387 SUPERFAMILY SSF103473 4 375 1.57E-46 T 01-11-2018 IPR036259 MFS transporter superfamily CDA09_16475 6eea278f2f08356f23d0b1a85e94b98a 387 Pfam PF12832 MFS_1 like family 4 357 6.5E-76 T 01-11-2018 IPR024989 Major facilitator superfamily associated domain CDA09_16475 6eea278f2f08356f23d0b1a85e94b98a 387 Gene3D G3DSA:1.20.1250.20 188 383 1.5E-41 T 01-11-2018 CDA09_16475 6eea278f2f08356f23d0b1a85e94b98a 387 Gene3D G3DSA:1.20.1250.20 3 187 3.4E-23 T 01-11-2018 CDA09_16475 6eea278f2f08356f23d0b1a85e94b98a 387 PIRSF PIRSF004925 1 384 3.8E-105 T 01-11-2018 IPR026032 Probable 3-phenylpropionic acid transporter CDA09_13190 07445ee0fbfc0f9f787a972ccd2a5af5 948 SMART SM00861 592 789 1.2E-60 T 01-11-2018 IPR005475 Transketolase-like, pyrimidine-binding domain CDA09_13190 07445ee0fbfc0f9f787a972ccd2a5af5 948 SUPERFAMILY SSF52518 117 520 1.51E-85 T 01-11-2018 IPR029061 Thiamin diphosphate-binding fold CDA09_13190 07445ee0fbfc0f9f787a972ccd2a5af5 948 PIRSF PIRSF000157 1 938 0.0 T 01-11-2018 IPR011603 2-oxoglutarate dehydrogenase E1 component GO:0004591|GO:0006099|GO:0030976|GO:0055114 KEGG: 00020+1.2.4.2|KEGG: 00310+1.2.4.2|KEGG: 00380+1.2.4.2|MetaCyc: PWY-5084 CDA09_13190 07445ee0fbfc0f9f787a972ccd2a5af5 948 Pfam PF02779 Transketolase, pyrimidine binding domain 592 790 1.7E-64 T 01-11-2018 IPR005475 Transketolase-like, pyrimidine-binding domain CDA09_13190 07445ee0fbfc0f9f787a972ccd2a5af5 948 Pfam PF00676 Dehydrogenase E1 component 210 512 5.6E-49 T 01-11-2018 IPR001017 Dehydrogenase, E1 component GO:0016624 Reactome: R-HSA-389661 CDA09_13190 07445ee0fbfc0f9f787a972ccd2a5af5 948 TIGRFAM TIGR00239 2oxo_dh_E1: oxoglutarate dehydrogenase (succinyl-transferring), E1 component 12 935 0.0 T 01-11-2018 IPR011603 2-oxoglutarate dehydrogenase E1 component GO:0004591|GO:0006099|GO:0030976|GO:0055114 KEGG: 00020+1.2.4.2|KEGG: 00310+1.2.4.2|KEGG: 00380+1.2.4.2|MetaCyc: PWY-5084 CDA09_13190 07445ee0fbfc0f9f787a972ccd2a5af5 948 Gene3D G3DSA:3.40.50.970 164 519 2.6E-140 T 01-11-2018 CDA09_13190 07445ee0fbfc0f9f787a972ccd2a5af5 948 SUPERFAMILY SSF52518 575 796 3.46E-51 T 01-11-2018 IPR029061 Thiamin diphosphate-binding fold CDA09_13190 07445ee0fbfc0f9f787a972ccd2a5af5 948 Pfam PF16078 2-oxoglutarate dehydrogenase N-terminus 8 47 3.8E-18 T 01-11-2018 IPR032106 2-oxoglutarate dehydrogenase E1 component, N-terminal domain KEGG: 00020+1.2.4.2|KEGG: 00310+1.2.4.2|KEGG: 00380+1.2.4.2|MetaCyc: PWY-5084 CDA09_13190 07445ee0fbfc0f9f787a972ccd2a5af5 948 Gene3D G3DSA:3.40.50.11610 726 933 2.2E-166 T 01-11-2018 CDA09_13190 07445ee0fbfc0f9f787a972ccd2a5af5 948 Gene3D G3DSA:1.10.287.1150 81 163 5.0E-24 T 01-11-2018 CDA09_13190 07445ee0fbfc0f9f787a972ccd2a5af5 948 Gene3D G3DSA:3.40.50.12470 555 805 2.2E-166 T 01-11-2018 CDA09_13190 07445ee0fbfc0f9f787a972ccd2a5af5 948 Pfam PF16870 2-oxoglutarate dehydrogenase C-terminal 794 936 1.5E-49 T 01-11-2018 IPR031717 Multifunctional 2-oxoglutarate metabolism enzyme, C-terminal KEGG: 00020+1.2.4.2|KEGG: 00310+1.2.4.2|KEGG: 00380+1.2.4.2|MetaCyc: PWY-5084 CDA09_20760 99ae73344d2c22fcbbb9287bfbf10235 467 SUPERFAMILY SSF109604 286 408 1.64E-7 T 01-11-2018 CDA09_20760 99ae73344d2c22fcbbb9287bfbf10235 467 Gene3D G3DSA:1.10.3210.30 297 466 1.5E-7 T 01-11-2018 IPR038257 CRISPR-associated Cas3-type HD domain superfamily CDA09_01610 22c4e0a8573da3ae62726a0e1c924f85 107 Pfam PF07883 Cupin domain 37 98 2.0E-10 T 01-11-2018 IPR013096 Cupin 2, conserved barrel CDA09_01610 22c4e0a8573da3ae62726a0e1c924f85 107 Gene3D G3DSA:2.60.120.10 17 107 1.5E-33 T 01-11-2018 IPR014710 RmlC-like jelly roll fold CDA09_01610 22c4e0a8573da3ae62726a0e1c924f85 107 SUPERFAMILY SSF51182 6 104 4.58E-18 T 01-11-2018 IPR011051 RmlC-like cupin domain superfamily CDA09_13790 cb977e597411b1e72d2450bb7ebeceb7 500 Pfam PF13384 Homeodomain-like domain 14 47 5.4E-6 T 01-11-2018 CDA09_13790 cb977e597411b1e72d2450bb7ebeceb7 500 Pfam PF00665 Integrase core domain 129 253 6.6E-15 T 01-11-2018 IPR001584 Integrase, catalytic core GO:0015074 CDA09_17750 31410f562a20c50c1559768ccf6cbdff 401 Pfam PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain 31 379 4.0E-15 T 01-11-2018 IPR022643 Orn/DAP/Arg decarboxylase 2, C-terminal GO:0003824 CDA09_17750 31410f562a20c50c1559768ccf6cbdff 401 TIGRFAM TIGR03099 dCO2ase_PEP1: pyridoxal-dependent decarboxylase, exosortase A system-associated 5 401 2.2E-194 T 01-11-2018 IPR017530 Pyridoxal-dependent decarboxylase, exosortase system type 1 associated CDA09_17750 31410f562a20c50c1559768ccf6cbdff 401 PRINTS PR01182 Ornithine decarboxylase signature 55 82 2.6E-6 T 01-11-2018 IPR002433 Ornithine decarboxylase GO:0006596 CDA09_17750 31410f562a20c50c1559768ccf6cbdff 401 PRINTS PR01182 Ornithine decarboxylase signature 346 356 2.6E-6 T 01-11-2018 IPR002433 Ornithine decarboxylase GO:0006596 CDA09_17750 31410f562a20c50c1559768ccf6cbdff 401 PRINTS PR01182 Ornithine decarboxylase signature 99 123 2.6E-6 T 01-11-2018 IPR002433 Ornithine decarboxylase GO:0006596 CDA09_17750 31410f562a20c50c1559768ccf6cbdff 401 ProSitePatterns PS00879 Orn/DAP/Arg decarboxylases family 2 signature 2. 222 239 - T 01-11-2018 IPR022657 Orn/DAP/Arg decarboxylase 2, conserved site CDA09_17750 31410f562a20c50c1559768ccf6cbdff 401 SUPERFAMILY SSF51419 28 286 1.14E-66 T 01-11-2018 IPR029066 PLP-binding barrel CDA09_17750 31410f562a20c50c1559768ccf6cbdff 401 Gene3D G3DSA:3.20.20.10 35 286 2.5E-104 T 01-11-2018 IPR029066 PLP-binding barrel CDA09_17750 31410f562a20c50c1559768ccf6cbdff 401 PRINTS PR01179 Ornithine/diaminopimelate/arginine (ODA) decarboxylase family signature 57 75 2.0E-8 T 01-11-2018 IPR000183 Ornithine/DAP/Arg decarboxylase GO:0003824 CDA09_17750 31410f562a20c50c1559768ccf6cbdff 401 PRINTS PR01179 Ornithine/diaminopimelate/arginine (ODA) decarboxylase family signature 77 89 2.0E-8 T 01-11-2018 IPR000183 Ornithine/DAP/Arg decarboxylase GO:0003824 CDA09_17750 31410f562a20c50c1559768ccf6cbdff 401 PRINTS PR01179 Ornithine/diaminopimelate/arginine (ODA) decarboxylase family signature 274 293 2.0E-8 T 01-11-2018 IPR000183 Ornithine/DAP/Arg decarboxylase GO:0003824 CDA09_17750 31410f562a20c50c1559768ccf6cbdff 401 Gene3D G3DSA:2.40.37.10 27 401 2.5E-104 T 01-11-2018 IPR009006 Alanine racemase/group IV decarboxylase, C-terminal GO:0003824 CDA09_17750 31410f562a20c50c1559768ccf6cbdff 401 Pfam PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain 38 284 5.2E-40 T 01-11-2018 IPR022644 Orn/DAP/Arg decarboxylase 2, N-terminal GO:0003824 CDA09_17750 31410f562a20c50c1559768ccf6cbdff 401 SUPERFAMILY SSF50621 261 401 4.19E-33 T 01-11-2018 IPR009006 Alanine racemase/group IV decarboxylase, C-terminal GO:0003824 CDA09_09525 31bab96430482a3c99239990a8e1c729 402 SUPERFAMILY SSF53901 1 274 1.51E-63 T 01-11-2018 IPR016039 Thiolase-like GO:0003824 CDA09_09525 31bab96430482a3c99239990a8e1c729 402 Gene3D G3DSA:3.40.47.10 125 397 8.4E-137 T 01-11-2018 IPR016039 Thiolase-like GO:0003824 CDA09_09525 31bab96430482a3c99239990a8e1c729 402 Pfam PF02803 Thiolase, C-terminal domain 279 400 2.3E-41 T 01-11-2018 IPR020617 Thiolase, C-terminal GO:0016747 CDA09_09525 31bab96430482a3c99239990a8e1c729 402 ProSitePatterns PS00099 Thiolases active site. 383 396 - T 01-11-2018 IPR020610 Thiolase, active site GO:0016747 CDA09_09525 31bab96430482a3c99239990a8e1c729 402 Gene3D G3DSA:3.40.47.10 6 299 8.4E-137 T 01-11-2018 IPR016039 Thiolase-like GO:0003824 CDA09_09525 31bab96430482a3c99239990a8e1c729 402 TIGRFAM TIGR01930 AcCoA-C-Actrans: acetyl-CoA C-acyltransferase 6 400 3.1E-122 T 01-11-2018 IPR002155 Thiolase GO:0016747 CDA09_09525 31bab96430482a3c99239990a8e1c729 402 SUPERFAMILY SSF53901 280 401 7.86E-40 T 01-11-2018 IPR016039 Thiolase-like GO:0003824 CDA09_09525 31bab96430482a3c99239990a8e1c729 402 ProSitePatterns PS00098 Thiolases acyl-enzyme intermediate signature. 87 105 - T 01-11-2018 IPR020615 Thiolase, acyl-enzyme intermediate active site GO:0016747 CDA09_09525 31bab96430482a3c99239990a8e1c729 402 PIRSF PIRSF000429 1 402 4.6E-111 T 01-11-2018 IPR002155 Thiolase GO:0016747 CDA09_09525 31bab96430482a3c99239990a8e1c729 402 Pfam PF00108 Thiolase, N-terminal domain 4 229 2.2E-48 T 01-11-2018 IPR020616 Thiolase, N-terminal GO:0016747 CDA09_09525 31bab96430482a3c99239990a8e1c729 402 ProSitePatterns PS00737 Thiolases signature 2. 348 364 - T 01-11-2018 IPR020613 Thiolase, conserved site GO:0016747 CDA09_16890 bcf76c544b0dc8932bb6909fba59cc03 255 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 78 89 5.9E-29 T 01-11-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CDA09_16890 bcf76c544b0dc8932bb6909fba59cc03 255 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 135 151 5.9E-29 T 01-11-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CDA09_16890 bcf76c544b0dc8932bb6909fba59cc03 255 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 161 180 5.9E-29 T 01-11-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CDA09_16890 bcf76c544b0dc8932bb6909fba59cc03 255 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 182 199 5.9E-29 T 01-11-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CDA09_16890 bcf76c544b0dc8932bb6909fba59cc03 255 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 216 236 5.9E-29 T 01-11-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CDA09_16890 bcf76c544b0dc8932bb6909fba59cc03 255 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 7 24 5.9E-29 T 01-11-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CDA09_16890 bcf76c544b0dc8932bb6909fba59cc03 255 SMART SM00822 This enzymatic domain is part of bacterial polyketide synthases and catalyses the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain. It uses NADPH to reduce the keto group to a hydroxy group. 6 196 0.0039 T 01-11-2018 CDA09_16890 bcf76c544b0dc8932bb6909fba59cc03 255 Gene3D G3DSA:3.40.50.720 1 255 3.9E-77 T 01-11-2018 CDA09_16890 bcf76c544b0dc8932bb6909fba59cc03 255 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 148 176 - T 01-11-2018 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 CDA09_16890 bcf76c544b0dc8932bb6909fba59cc03 255 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 78 89 1.8E-9 T 01-11-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CDA09_16890 bcf76c544b0dc8932bb6909fba59cc03 255 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 161 180 1.8E-9 T 01-11-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CDA09_16890 bcf76c544b0dc8932bb6909fba59cc03 255 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 141 149 1.8E-9 T 01-11-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CDA09_16890 bcf76c544b0dc8932bb6909fba59cc03 255 Pfam PF00106 short chain dehydrogenase 7 204 2.7E-48 T 01-11-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CDA09_16890 bcf76c544b0dc8932bb6909fba59cc03 255 SUPERFAMILY SSF51735 3 250 3.36E-64 T 01-11-2018 IPR036291 NAD(P)-binding domain superfamily CDA09_07685 9fefa5622e7b81d20f11794e9d348da3 928 Gene3D G3DSA:3.30.300.30 552 664 3.6E-25 T 01-11-2018 CDA09_07685 9fefa5622e7b81d20f11794e9d348da3 928 SUPERFAMILY SSF69593 720 901 1.27E-33 T 01-11-2018 CDA09_07685 9fefa5622e7b81d20f11794e9d348da3 928 SUPERFAMILY SSF56801 109 661 4.19E-121 T 01-11-2018 CDA09_07685 9fefa5622e7b81d20f11794e9d348da3 928 ProSitePatterns PS00455 Putative AMP-binding domain signature. 274 285 - T 01-11-2018 IPR020845 AMP-binding, conserved site CDA09_07685 9fefa5622e7b81d20f11794e9d348da3 928 Gene3D G3DSA:3.40.50.12780 96 551 2.3E-150 T 01-11-2018 CDA09_07685 9fefa5622e7b81d20f11794e9d348da3 928 Pfam PF00550 Phosphopantetheine attachment site 28 82 2.5E-8 T 01-11-2018 IPR009081 Phosphopantetheine binding ACP domain CDA09_07685 9fefa5622e7b81d20f11794e9d348da3 928 SUPERFAMILY SSF47336 10 95 2.62E-13 T 01-11-2018 IPR036736 ACP-like superfamily CDA09_07685 9fefa5622e7b81d20f11794e9d348da3 928 Gene3D G3DSA:1.10.1200.10 8 94 1.9E-13 T 01-11-2018 IPR036736 ACP-like superfamily CDA09_07685 9fefa5622e7b81d20f11794e9d348da3 928 Pfam PF01553 Acyltransferase 743 869 4.0E-22 T 01-11-2018 IPR002123 Phospholipid/glycerol acyltransferase GO:0016746 CDA09_07685 9fefa5622e7b81d20f11794e9d348da3 928 SMART SM00563 758 872 5.1E-28 T 01-11-2018 IPR002123 Phospholipid/glycerol acyltransferase GO:0016746 CDA09_07685 9fefa5622e7b81d20f11794e9d348da3 928 Pfam PF00501 AMP-binding enzyme 118 557 2.2E-86 T 01-11-2018 IPR000873 AMP-dependent synthetase/ligase GO:0003824 CDA09_20510 671ff85576a0b93d083b906586f165a3 399 SUPERFAMILY SSF53901 276 398 4.53E-38 T 01-11-2018 IPR016039 Thiolase-like GO:0003824 CDA09_20510 671ff85576a0b93d083b906586f165a3 399 ProSitePatterns PS00098 Thiolases acyl-enzyme intermediate signature. 90 108 - T 01-11-2018 IPR020615 Thiolase, acyl-enzyme intermediate active site GO:0016747 CDA09_20510 671ff85576a0b93d083b906586f165a3 399 PIRSF PIRSF000429 2 399 1.5E-121 T 01-11-2018 IPR002155 Thiolase GO:0016747 CDA09_20510 671ff85576a0b93d083b906586f165a3 399 SUPERFAMILY SSF53901 7 275 3.41E-72 T 01-11-2018 IPR016039 Thiolase-like GO:0003824 CDA09_20510 671ff85576a0b93d083b906586f165a3 399 TIGRFAM TIGR01930 AcCoA-C-Actrans: acetyl-CoA C-acyltransferase 10 397 1.3E-134 T 01-11-2018 IPR002155 Thiolase GO:0016747 CDA09_20510 671ff85576a0b93d083b906586f165a3 399 ProSitePatterns PS00737 Thiolases signature 2. 344 360 - T 01-11-2018 IPR020613 Thiolase, conserved site GO:0016747 CDA09_20510 671ff85576a0b93d083b906586f165a3 399 Gene3D G3DSA:3.40.47.10 10 281 4.3E-138 T 01-11-2018 IPR016039 Thiolase-like GO:0003824 CDA09_20510 671ff85576a0b93d083b906586f165a3 399 ProSitePatterns PS00099 Thiolases active site. 380 393 - T 01-11-2018 IPR020610 Thiolase, active site GO:0016747 CDA09_20510 671ff85576a0b93d083b906586f165a3 399 Gene3D G3DSA:3.40.47.10 132 395 4.3E-138 T 01-11-2018 IPR016039 Thiolase-like GO:0003824 CDA09_20510 671ff85576a0b93d083b906586f165a3 399 Pfam PF00108 Thiolase, N-terminal domain 9 267 7.8E-72 T 01-11-2018 IPR020616 Thiolase, N-terminal GO:0016747 CDA09_20510 671ff85576a0b93d083b906586f165a3 399 Pfam PF02803 Thiolase, C-terminal domain 276 398 1.6E-40 T 01-11-2018 IPR020617 Thiolase, C-terminal GO:0016747 CDA09_10615 cdff94332d103d5e2fe7a5b1aa63762b 85 TIGRFAM TIGR02181 GRX_bact: glutaredoxin 3 4 83 1.4E-30 T 01-11-2018 IPR011900 Glutaredoxin, GrxC GO:0045454 CDA09_10615 cdff94332d103d5e2fe7a5b1aa63762b 85 Gene3D G3DSA:3.40.30.10 1 84 1.6E-22 T 01-11-2018 CDA09_10615 cdff94332d103d5e2fe7a5b1aa63762b 85 SUPERFAMILY SSF52833 2 84 3.05E-20 T 01-11-2018 IPR036249 Thioredoxin-like superfamily CDA09_10615 cdff94332d103d5e2fe7a5b1aa63762b 85 Pfam PF00462 Glutaredoxin 4 64 3.1E-15 T 01-11-2018 IPR002109 Glutaredoxin GO:0009055|GO:0015035|GO:0045454 CDA09_10615 cdff94332d103d5e2fe7a5b1aa63762b 85 PRINTS PR00160 Glutaredoxin signature 4 22 4.1E-13 T 01-11-2018 IPR014025 Glutaredoxin subgroup CDA09_10615 cdff94332d103d5e2fe7a5b1aa63762b 85 PRINTS PR00160 Glutaredoxin signature 61 74 4.1E-13 T 01-11-2018 IPR014025 Glutaredoxin subgroup CDA09_10615 cdff94332d103d5e2fe7a5b1aa63762b 85 PRINTS PR00160 Glutaredoxin signature 47 60 4.1E-13 T 01-11-2018 IPR014025 Glutaredoxin subgroup CDA09_11600 3d050acd35272f263e1ef5f46e58005b 439 PIRSF PIRSF000724 25 423 5.1E-122 T 01-11-2018 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 CDA09_11600 3d050acd35272f263e1ef5f46e58005b 439 Pfam PF00162 Phosphoglycerate kinase 34 406 7.2E-124 T 01-11-2018 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 CDA09_11600 3d050acd35272f263e1ef5f46e58005b 439 PRINTS PR00477 Phosphoglycerate kinase family signature 161 183 2.7E-74 T 01-11-2018 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 CDA09_11600 3d050acd35272f263e1ef5f46e58005b 439 PRINTS PR00477 Phosphoglycerate kinase family signature 215 234 2.7E-74 T 01-11-2018 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 CDA09_11600 3d050acd35272f263e1ef5f46e58005b 439 PRINTS PR00477 Phosphoglycerate kinase family signature 337 362 2.7E-74 T 01-11-2018 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 CDA09_11600 3d050acd35272f263e1ef5f46e58005b 439 PRINTS PR00477 Phosphoglycerate kinase family signature 192 214 2.7E-74 T 01-11-2018 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 CDA09_11600 3d050acd35272f263e1ef5f46e58005b 439 PRINTS PR00477 Phosphoglycerate kinase family signature 133 148 2.7E-74 T 01-11-2018 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 CDA09_11600 3d050acd35272f263e1ef5f46e58005b 439 PRINTS PR00477 Phosphoglycerate kinase family signature 393 410 2.7E-74 T 01-11-2018 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 CDA09_11600 3d050acd35272f263e1ef5f46e58005b 439 PRINTS PR00477 Phosphoglycerate kinase family signature 59 81 2.7E-74 T 01-11-2018 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 CDA09_11600 3d050acd35272f263e1ef5f46e58005b 439 PRINTS PR00477 Phosphoglycerate kinase family signature 37 53 2.7E-74 T 01-11-2018 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 CDA09_11600 3d050acd35272f263e1ef5f46e58005b 439 PRINTS PR00477 Phosphoglycerate kinase family signature 370 381 2.7E-74 T 01-11-2018 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 CDA09_11600 3d050acd35272f263e1ef5f46e58005b 439 Hamap MF_00145 Phosphoglycerate kinase [pgk]. 32 417 36.698 T 01-11-2018 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 CDA09_11600 3d050acd35272f263e1ef5f46e58005b 439 Gene3D G3DSA:3.40.50.1260 35 415 9.4E-131 T 01-11-2018 IPR015824 Phosphoglycerate kinase, N-terminal GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 CDA09_11600 3d050acd35272f263e1ef5f46e58005b 439 ProSitePatterns PS00111 Phosphoglycerate kinase signature. 42 52 - T 01-11-2018 IPR015911 Phosphoglycerate kinase, conserved site GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 CDA09_11600 3d050acd35272f263e1ef5f46e58005b 439 SUPERFAMILY SSF53748 30 416 4.71E-129 T 01-11-2018 IPR036043 Phosphoglycerate kinase superfamily GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 CDA09_11600 3d050acd35272f263e1ef5f46e58005b 439 Gene3D G3DSA:3.40.50.1260 194 407 9.4E-131 T 01-11-2018 IPR015824 Phosphoglycerate kinase, N-terminal GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 CDA09_07735 9577211e2aa4ab714ce6661c36161dce 859 SUPERFAMILY SSF141868 459 709 2.09E-94 T 01-11-2018 IPR035919 EAL domain superfamily CDA09_07735 9577211e2aa4ab714ce6661c36161dce 859 Gene3D G3DSA:3.30.450.20 30 147 8.3E-19 T 01-11-2018 CDA09_07735 9577211e2aa4ab714ce6661c36161dce 859 Gene3D G3DSA:3.20.20.450 457 710 2.2E-103 T 01-11-2018 IPR035919 EAL domain superfamily CDA09_07735 9577211e2aa4ab714ce6661c36161dce 859 Gene3D G3DSA:3.30.70.270 281 456 2.0E-52 T 01-11-2018 CDA09_07735 9577211e2aa4ab714ce6661c36161dce 859 Pfam PF00990 Diguanylate cyclase, GGDEF domain 282 439 9.9E-44 T 01-11-2018 IPR000160 GGDEF domain CDA09_07735 9577211e2aa4ab714ce6661c36161dce 859 SUPERFAMILY SSF55073 287 446 1.49E-44 T 01-11-2018 IPR029787 Nucleotide cyclase CDA09_07735 9577211e2aa4ab714ce6661c36161dce 859 Gene3D G3DSA:3.30.450.20 157 280 3.9E-36 T 01-11-2018 CDA09_07735 9577211e2aa4ab714ce6661c36161dce 859 SUPERFAMILY SSF55785 38 149 7.41E-14 T 01-11-2018 IPR035965 PAS domain superfamily CDA09_07735 9577211e2aa4ab714ce6661c36161dce 859 SMART SM00086 106 149 4.0 T 01-11-2018 IPR001610 PAC motif CDA09_07735 9577211e2aa4ab714ce6661c36161dce 859 SMART SM00086 229 271 4.9E-6 T 01-11-2018 IPR001610 PAC motif CDA09_07735 9577211e2aa4ab714ce6661c36161dce 859 SUPERFAMILY SSF55785 165 267 2.74E-28 T 01-11-2018 IPR035965 PAS domain superfamily CDA09_07735 9577211e2aa4ab714ce6661c36161dce 859 SMART SM00052 454 700 1.4E-125 T 01-11-2018 IPR001633 EAL domain CDA09_07735 9577211e2aa4ab714ce6661c36161dce 859 Pfam PF08447 PAS fold 58 141 1.1E-14 T 01-11-2018 IPR013655 PAS fold-3 GO:0005515 CDA09_07735 9577211e2aa4ab714ce6661c36161dce 859 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 153 278 1.2E-19 T 01-11-2018 IPR000014 PAS domain CDA09_07735 9577211e2aa4ab714ce6661c36161dce 859 SMART SM00091 157 223 0.003 T 01-11-2018 IPR000014 PAS domain CDA09_07735 9577211e2aa4ab714ce6661c36161dce 859 SMART SM00091 31 101 7.8E-4 T 01-11-2018 IPR000014 PAS domain CDA09_07735 9577211e2aa4ab714ce6661c36161dce 859 Pfam PF00072 Response regulator receiver domain 724 833 7.3E-22 T 01-11-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 CDA09_07735 9577211e2aa4ab714ce6661c36161dce 859 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 278 442 3.4E-37 T 01-11-2018 IPR000160 GGDEF domain CDA09_07735 9577211e2aa4ab714ce6661c36161dce 859 SMART SM00448 721 833 2.1E-26 T 01-11-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 CDA09_07735 9577211e2aa4ab714ce6661c36161dce 859 Pfam PF13426 PAS domain 169 270 3.0E-14 T 01-11-2018 IPR000014 PAS domain CDA09_07735 9577211e2aa4ab714ce6661c36161dce 859 Gene3D G3DSA:3.40.50.2300 714 844 6.3E-31 T 01-11-2018 CDA09_07735 9577211e2aa4ab714ce6661c36161dce 859 Pfam PF00563 EAL domain 460 695 1.0E-72 T 01-11-2018 IPR001633 EAL domain CDA09_07735 9577211e2aa4ab714ce6661c36161dce 859 SUPERFAMILY SSF52172 721 842 1.71E-31 T 01-11-2018 IPR011006 CheY-like superfamily CDA09_07735 9577211e2aa4ab714ce6661c36161dce 859 SMART SM00267 271 444 1.8E-56 T 01-11-2018 IPR000160 GGDEF domain CDA09_03815 c53db578b1ba9d08233c28231d673401 188 Pfam PF00692 dUTPase 81 181 1.1E-6 T 01-11-2018 IPR029054 dUTPase-like CDA09_03815 c53db578b1ba9d08233c28231d673401 188 TIGRFAM TIGR02274 dCTP_deam: deoxycytidine triphosphate deaminase 4 188 7.1E-48 T 01-11-2018 IPR011962 dCTP deaminase GO:0006229|GO:0008829 CDA09_03815 c53db578b1ba9d08233c28231d673401 188 Hamap MF_00146 dCTP deaminase [dcd]. 1 188 28.306 T 01-11-2018 IPR011962 dCTP deaminase GO:0006229|GO:0008829 CDA09_03815 c53db578b1ba9d08233c28231d673401 188 SUPERFAMILY SSF51283 3 188 5.23E-51 T 01-11-2018 IPR036157 dUTPase-like superfamily CDA09_03815 c53db578b1ba9d08233c28231d673401 188 Gene3D G3DSA:2.70.40.10 1 159 2.0E-51 T 01-11-2018 IPR036157 dUTPase-like superfamily CDA09_21380 a624583b0e551fcc04a90b69e7c072d7 299 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 18 29 2.2E-9 T 01-11-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 CDA09_21380 a624583b0e551fcc04a90b69e7c072d7 299 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 39 50 2.2E-9 T 01-11-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 CDA09_21380 a624583b0e551fcc04a90b69e7c072d7 299 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 29 39 2.2E-9 T 01-11-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 CDA09_21380 a624583b0e551fcc04a90b69e7c072d7 299 SUPERFAMILY SSF53850 88 296 8.38E-31 T 01-11-2018 CDA09_21380 a624583b0e551fcc04a90b69e7c072d7 299 SUPERFAMILY SSF46785 1 86 3.37E-22 T 01-11-2018 IPR036390 Winged helix DNA-binding domain superfamily CDA09_21380 a624583b0e551fcc04a90b69e7c072d7 299 Gene3D G3DSA:1.10.10.10 1 92 2.9E-28 T 01-11-2018 IPR036388 Winged helix-like DNA-binding domain superfamily CDA09_21380 a624583b0e551fcc04a90b69e7c072d7 299 Pfam PF03466 LysR substrate binding domain 87 293 6.7E-32 T 01-11-2018 IPR005119 LysR, substrate-binding CDA09_21380 a624583b0e551fcc04a90b69e7c072d7 299 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 3 61 9.2E-21 T 01-11-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 CDA09_21380 a624583b0e551fcc04a90b69e7c072d7 299 Gene3D G3DSA:3.40.190.10 93 273 1.3E-29 T 01-11-2018 CDA09_21380 a624583b0e551fcc04a90b69e7c072d7 299 Gene3D G3DSA:3.40.190.10 163 268 1.3E-29 T 01-11-2018 CDA09_07120 4ed2e36228a9105a81f87a9581ebe18f 204 Hamap MF_00052_B Ribonuclease HII [rnhB]. 9 188 35.589 T 01-11-2018 IPR022898 Ribonuclease HII GO:0004523 CDA09_07120 4ed2e36228a9105a81f87a9581ebe18f 204 Pfam PF01351 Ribonuclease HII 11 186 2.8E-40 T 01-11-2018 IPR024567 Ribonuclease HII/HIII domain CDA09_07120 4ed2e36228a9105a81f87a9581ebe18f 204 Gene3D G3DSA:3.30.420.10 3 199 7.9E-73 T 01-11-2018 IPR036397 Ribonuclease H superfamily GO:0003676 CDA09_07120 4ed2e36228a9105a81f87a9581ebe18f 204 SUPERFAMILY SSF53098 8 195 3.95E-68 T 01-11-2018 IPR012337 Ribonuclease H-like superfamily CDA09_10495 83c5ac1c3d0a97f88103a04f31b395dd 177 Pfam PF01883 Iron-sulfur cluster assembly protein 9 75 2.9E-12 T 01-11-2018 IPR002744 MIP18 family-like CDA09_10495 83c5ac1c3d0a97f88103a04f31b395dd 177 TIGRFAM TIGR02159 PA_CoA_Oxy4: phenylacetate-CoA oxygenase, PaaJ subunit 18 176 5.7E-54 T 01-11-2018 IPR011883 Phenylacetate-CoA oxygenase, PaaJ subunit CDA09_10495 83c5ac1c3d0a97f88103a04f31b395dd 177 Gene3D G3DSA:3.30.300.130 3 106 2.6E-25 T 01-11-2018 IPR034904 Fe-S cluster assembly domain superfamily CDA09_10495 83c5ac1c3d0a97f88103a04f31b395dd 177 SUPERFAMILY SSF117916 9 104 4.25E-23 T 01-11-2018 IPR034904 Fe-S cluster assembly domain superfamily CDA09_18105 8ace920d16c4cee900ef17d4154252ba 206 TIGRFAM TIGR00427 TIGR00427: membrane protein, MarC family 3 197 1.7E-37 T 01-11-2018 IPR002771 Multiple antibiotic resistance (MarC)-related GO:0016021 CDA09_18105 8ace920d16c4cee900ef17d4154252ba 206 Pfam PF01914 MarC family integral membrane protein 1 200 3.4E-41 T 01-11-2018 IPR002771 Multiple antibiotic resistance (MarC)-related GO:0016021 CDA09_16835 4be8f4e57e136057d36de6576c3afc81 469 Gene3D G3DSA:3.60.15.10 6 443 2.0E-135 T 01-11-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like CDA09_16835 4be8f4e57e136057d36de6576c3afc81 469 Pfam PF07521 Zn-dependent metallo-hydrolase RNA specificity domain 397 456 1.1E-12 T 01-11-2018 IPR011108 Zn-dependent metallo-hydrolase, RNA specificity domain CDA09_16835 4be8f4e57e136057d36de6576c3afc81 469 Pfam PF00753 Metallo-beta-lactamase superfamily 10 202 6.2E-13 T 01-11-2018 IPR001279 Metallo-beta-lactamase CDA09_16835 4be8f4e57e136057d36de6576c3afc81 469 SMART SM00849 13 222 7.1E-18 T 01-11-2018 IPR001279 Metallo-beta-lactamase CDA09_16835 4be8f4e57e136057d36de6576c3afc81 469 Gene3D G3DSA:3.40.50.10890 224 408 2.0E-135 T 01-11-2018 CDA09_16835 4be8f4e57e136057d36de6576c3afc81 469 SUPERFAMILY SSF56281 1 462 3.54E-120 T 01-11-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like CDA09_16835 4be8f4e57e136057d36de6576c3afc81 469 Pfam PF10996 Beta-Casp domain 257 382 3.1E-22 T 01-11-2018 IPR022712 Beta-Casp domain CDA09_16835 4be8f4e57e136057d36de6576c3afc81 469 SMART SM01027 257 382 1.3E-48 T 01-11-2018 IPR022712 Beta-Casp domain CDA09_21645 ae27a131f3b0adc2ee618ac39a7578f6 316 Pfam PF06834 TraU protein 36 304 1.1E-73 T 01-11-2018 IPR009649 TraU CDA09_21645 ae27a131f3b0adc2ee618ac39a7578f6 316 TIGRFAM TIGR03756 conj_TIGR03756: integrating conjugative element protein, PFL_4710 family 30 314 5.0E-135 T 01-11-2018 IPR026331 Integrating conjugative element protein PFL_4710 CDA09_11440 c98efc781c8937ce6053181cf74eae7a 313 Pfam PF00892 EamA-like transporter family 156 292 9.4E-18 T 01-11-2018 IPR000620 EamA domain GO:0016020|GO:0016021 CDA09_11440 c98efc781c8937ce6053181cf74eae7a 313 Pfam PF00892 EamA-like transporter family 14 141 2.8E-12 T 01-11-2018 IPR000620 EamA domain GO:0016020|GO:0016021 CDA09_11440 c98efc781c8937ce6053181cf74eae7a 313 SUPERFAMILY SSF103481 192 294 4.05E-13 T 01-11-2018 CDA09_11440 c98efc781c8937ce6053181cf74eae7a 313 SUPERFAMILY SSF103481 45 144 2.88E-13 T 01-11-2018 CDA09_16200 2415dbc8b6408f405b2ea4bdcab84494 779 ProSitePatterns PS00642 Respiratory-chain NADH dehydrogenase 75 Kd subunit signature 2. 98 110 - T 01-11-2018 IPR000283 NADH:ubiquinone oxidoreductase, 75kDa subunit, conserved site GO:0008137|GO:0016020|GO:0042773|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 CDA09_16200 2415dbc8b6408f405b2ea4bdcab84494 779 SUPERFAMILY SSF54292 1 74 5.01E-20 T 01-11-2018 IPR036010 2Fe-2S ferredoxin-like superfamily GO:0009055|GO:0051536 CDA09_16200 2415dbc8b6408f405b2ea4bdcab84494 779 ProSitePatterns PS00641 Respiratory-chain NADH dehydrogenase 75 Kd subunit signature 1. 31 48 - T 01-11-2018 IPR000283 NADH:ubiquinone oxidoreductase, 75kDa subunit, conserved site GO:0008137|GO:0016020|GO:0042773|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 CDA09_16200 2415dbc8b6408f405b2ea4bdcab84494 779 Gene3D G3DSA:3.40.228.10 345 402 9.3E-15 T 01-11-2018 CDA09_16200 2415dbc8b6408f405b2ea4bdcab84494 779 SMART SM00929 83 123 2.1E-20 T 01-11-2018 IPR019574 NADH:ubiquinone oxidoreductase, subunit G, iron-sulphur binding GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 CDA09_16200 2415dbc8b6408f405b2ea4bdcab84494 779 TIGRFAM TIGR01973 NuoG: NADH dehydrogenase (quinone), G subunit 4 632 2.3E-196 T 01-11-2018 IPR010228 NADH:ubiquinone oxidoreductase, subunit G GO:0016651|GO:0051536|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 CDA09_16200 2415dbc8b6408f405b2ea4bdcab84494 779 Gene3D G3DSA:3.10.20.740 1 123 5.0E-42 T 01-11-2018 CDA09_16200 2415dbc8b6408f405b2ea4bdcab84494 779 SUPERFAMILY SSF54862 76 210 5.44E-38 T 01-11-2018 CDA09_16200 2415dbc8b6408f405b2ea4bdcab84494 779 Pfam PF10588 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region 83 121 1.4E-16 T 01-11-2018 IPR019574 NADH:ubiquinone oxidoreductase, subunit G, iron-sulphur binding GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 CDA09_16200 2415dbc8b6408f405b2ea4bdcab84494 779 Pfam PF13510 2Fe-2S iron-sulfur cluster binding domain 2 76 1.3E-19 T 01-11-2018 CDA09_16200 2415dbc8b6408f405b2ea4bdcab84494 779 ProSitePatterns PS00643 Respiratory-chain NADH dehydrogenase 75 Kd subunit signature 3. 145 155 - T 01-11-2018 IPR000283 NADH:ubiquinone oxidoreductase, 75kDa subunit, conserved site GO:0008137|GO:0016020|GO:0042773|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 CDA09_16200 2415dbc8b6408f405b2ea4bdcab84494 779 Gene3D G3DSA:3.30.70.20 124 204 3.9E-7 T 01-11-2018 CDA09_16200 2415dbc8b6408f405b2ea4bdcab84494 779 Pfam PF00384 Molybdopterin oxidoreductase 540 632 1.4E-11 T 01-11-2018 IPR006656 Molybdopterin oxidoreductase GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 CDA09_16200 2415dbc8b6408f405b2ea4bdcab84494 779 Pfam PF00384 Molybdopterin oxidoreductase 272 413 1.1E-15 T 01-11-2018 IPR006656 Molybdopterin oxidoreductase GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 CDA09_16200 2415dbc8b6408f405b2ea4bdcab84494 779 SUPERFAMILY SSF53706 213 655 5.32E-85 T 01-11-2018 CDA09_16200 2415dbc8b6408f405b2ea4bdcab84494 779 Gene3D G3DSA:3.40.50.740 509 662 1.2E-16 T 01-11-2018 CDA09_16200 2415dbc8b6408f405b2ea4bdcab84494 779 Gene3D G3DSA:3.40.50.740 280 344 9.3E-15 T 01-11-2018 CDA09_07090 3aec8d098675142cfb67737630b8ce7a 770 Gene3D G3DSA:3.10.20.310 269 344 4.8E-19 T 01-11-2018 CDA09_07090 3aec8d098675142cfb67737630b8ce7a 770 Pfam PF07244 Surface antigen variable number repeat 348 422 3.6E-15 T 01-11-2018 IPR010827 POTRA domain, BamA/TamA-like GO:0019867 CDA09_07090 3aec8d098675142cfb67737630b8ce7a 770 Pfam PF07244 Surface antigen variable number repeat 177 264 5.5E-20 T 01-11-2018 IPR010827 POTRA domain, BamA/TamA-like GO:0019867 CDA09_07090 3aec8d098675142cfb67737630b8ce7a 770 Pfam PF07244 Surface antigen variable number repeat 267 345 3.8E-13 T 01-11-2018 IPR010827 POTRA domain, BamA/TamA-like GO:0019867 CDA09_07090 3aec8d098675142cfb67737630b8ce7a 770 Pfam PF07244 Surface antigen variable number repeat 94 173 3.7E-13 T 01-11-2018 IPR010827 POTRA domain, BamA/TamA-like GO:0019867 CDA09_07090 3aec8d098675142cfb67737630b8ce7a 770 Gene3D G3DSA:2.40.160.50 426 770 1.2E-115 T 01-11-2018 CDA09_07090 3aec8d098675142cfb67737630b8ce7a 770 Gene3D G3DSA:3.10.20.310 176 267 9.9E-25 T 01-11-2018 CDA09_07090 3aec8d098675142cfb67737630b8ce7a 770 Hamap MF_01430 Outer membrane protein assembly factor BamA [bamA]. 2 770 26.143 T 01-11-2018 IPR023707 Outer membrane protein assembly factor BamA GO:0071709 CDA09_07090 3aec8d098675142cfb67737630b8ce7a 770 Gene3D G3DSA:3.10.20.310 21 92 8.2E-21 T 01-11-2018 CDA09_07090 3aec8d098675142cfb67737630b8ce7a 770 TIGRFAM TIGR03303 OM_YaeT: outer membrane protein assembly complex, YaeT protein 25 770 3.3E-278 T 01-11-2018 IPR023707 Outer membrane protein assembly factor BamA GO:0071709 CDA09_07090 3aec8d098675142cfb67737630b8ce7a 770 Pfam PF01103 Surface antigen 449 770 3.0E-78 T 01-11-2018 IPR000184 Bacterial surface antigen (D15) GO:0019867 Reactome: R-HSA-1268020|Reactome: R-HSA-8949613 CDA09_07090 3aec8d098675142cfb67737630b8ce7a 770 Gene3D G3DSA:3.10.20.310 93 173 8.0E-19 T 01-11-2018 CDA09_07090 3aec8d098675142cfb67737630b8ce7a 770 Gene3D G3DSA:3.10.20.310 349 425 5.1E-25 T 01-11-2018 CDA09_07090 3aec8d098675142cfb67737630b8ce7a 770 PIRSF PIRSF006076 1 770 4.2E-265 T 01-11-2018 IPR023707 Outer membrane protein assembly factor BamA GO:0071709 CDA09_21935 7ebfa2ad618d62e70f142b931e3c9488 314 SUPERFAMILY SSF51735 3 301 1.83E-40 T 01-11-2018 IPR036291 NAD(P)-binding domain superfamily CDA09_21935 7ebfa2ad618d62e70f142b931e3c9488 314 Pfam PF01370 NAD dependent epimerase/dehydratase family 5 224 6.3E-12 T 01-11-2018 IPR001509 NAD-dependent epimerase/dehydratase GO:0003824|GO:0050662 CDA09_21935 7ebfa2ad618d62e70f142b931e3c9488 314 Gene3D G3DSA:3.40.50.720 1 310 2.5E-39 T 01-11-2018 CDA09_19145 0637e255c1fd5d757ff6aa18391c9f9f 138 TIGRFAM TIGR02532 IV_pilin_GFxxxE: prepilin-type N-terminal cleavage/methylation domain 5 28 2.5E-10 T 01-11-2018 IPR012902 Prokaryotic N-terminal methylation site CDA09_19145 0637e255c1fd5d757ff6aa18391c9f9f 138 ProSitePatterns PS00409 Prokaryotic N-terminal methylation site. 6 26 - T 01-11-2018 IPR012902 Prokaryotic N-terminal methylation site CDA09_19145 0637e255c1fd5d757ff6aa18391c9f9f 138 Gene3D G3DSA:3.30.700.10 8 136 5.0E-29 T 01-11-2018 CDA09_19145 0637e255c1fd5d757ff6aa18391c9f9f 138 Pfam PF07963 Prokaryotic N-terminal methylation motif 2 28 1.6E-10 T 01-11-2018 IPR012902 Prokaryotic N-terminal methylation site CDA09_19145 0637e255c1fd5d757ff6aa18391c9f9f 138 SUPERFAMILY SSF54523 8 130 1.1E-23 T 01-11-2018 CDA09_19145 0637e255c1fd5d757ff6aa18391c9f9f 138 Pfam PF00114 Pilin (bacterial filament) 37 130 5.6E-6 T 01-11-2018 IPR001082 Fimbrial protein pilin GO:0007155|GO:0009289 CDA09_10250 2f04125228dba2b51242b67ba9090ae7 88 Pfam PF06099 Phenol hydroxylase subunit 6 61 4.8E-29 T 01-11-2018 IPR010353 Phenol hydroxylase subunit KEGG: 00623+1.14.13.7|KEGG: 00627+1.14.13.7|MetaCyc: PWY-5418|MetaCyc: PWY-6197 CDA09_10250 2f04125228dba2b51242b67ba9090ae7 88 ProDom PD468738 PHENOL HYDROXYLASE COMPONENT SUBUNIT PHENOLHYDROXYLASE MONOOXYGENASE TOMA0 P0 HYDROCARBONS IRON 6 52 3.0E-11 T 01-11-2018 IPR010353 Phenol hydroxylase subunit KEGG: 00623+1.14.13.7|KEGG: 00627+1.14.13.7|MetaCyc: PWY-5418|MetaCyc: PWY-6197 CDA09_10250 2f04125228dba2b51242b67ba9090ae7 88 PIRSF PIRSF000039 1 86 2.7E-22 T 01-11-2018 IPR010353 Phenol hydroxylase subunit KEGG: 00623+1.14.13.7|KEGG: 00627+1.14.13.7|MetaCyc: PWY-5418|MetaCyc: PWY-6197 CDA09_09545 17b3d7466f54f3515b0a9bcc2c7be4e4 133 Hamap MF_00265 tRNA(fMet)-specific endonuclease VapC [vapC]. 2 129 11.848 T 01-11-2018 IPR022907 VapC family GO:0004540 CDA09_09545 17b3d7466f54f3515b0a9bcc2c7be4e4 133 Gene3D G3DSA:3.40.50.1010 1 131 6.3E-41 T 01-11-2018 CDA09_09545 17b3d7466f54f3515b0a9bcc2c7be4e4 133 SUPERFAMILY SSF88723 2 130 2.64E-33 T 01-11-2018 IPR029060 PIN-like domain superfamily CDA09_09545 17b3d7466f54f3515b0a9bcc2c7be4e4 133 Pfam PF01850 PIN domain 2 116 2.2E-17 T 01-11-2018 IPR002716 PIN domain CDA09_18245 a1d83a774766a293c4d023efaf762aac 344 TIGRFAM TIGR00856 pyrC_dimer: dihydroorotase, homodimeric type 4 343 2.6E-141 T 01-11-2018 IPR004721 Dihydroorotase homodimeric type GO:0004151|GO:0019856 KEGG: 00240+3.5.2.3|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791 CDA09_18245 a1d83a774766a293c4d023efaf762aac 344 PIRSF PIRSF001237 1 344 1.1E-138 T 01-11-2018 IPR004721 Dihydroorotase homodimeric type GO:0004151|GO:0019856 KEGG: 00240+3.5.2.3|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791 CDA09_18245 a1d83a774766a293c4d023efaf762aac 344 Pfam PF01979 Amidohydrolase family 11 316 2.7E-21 T 01-11-2018 IPR006680 Amidohydrolase-related GO:0016787 CDA09_18245 a1d83a774766a293c4d023efaf762aac 344 ProSitePatterns PS00482 Dihydroorotase signature 1. 11 19 - T 01-11-2018 IPR002195 Dihydroorotase, conserved site GO:0016812 KEGG: 00240+3.5.2.3|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791 CDA09_18245 a1d83a774766a293c4d023efaf762aac 344 ProSitePatterns PS00483 Dihydroorotase signature 2. 245 256 - T 01-11-2018 IPR002195 Dihydroorotase, conserved site GO:0016812 KEGG: 00240+3.5.2.3|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791 CDA09_18245 a1d83a774766a293c4d023efaf762aac 344 Gene3D G3DSA:3.20.20.140 2 344 7.4E-107 T 01-11-2018 CDA09_18245 a1d83a774766a293c4d023efaf762aac 344 Hamap MF_00219 Dihydroorotase [pyrC]. 2 344 47.368 T 01-11-2018 IPR004721 Dihydroorotase homodimeric type GO:0004151|GO:0019856 KEGG: 00240+3.5.2.3|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791 CDA09_18245 a1d83a774766a293c4d023efaf762aac 344 SUPERFAMILY SSF51556 1 343 2.63E-144 T 01-11-2018 IPR032466 Metal-dependent hydrolase CDA09_05710 5ceb9c1bd6034d97edb935848f1e094e 344 Pfam PF00691 OmpA family 182 269 8.5E-10 T 01-11-2018 IPR006665 OmpA-like domain CDA09_05710 5ceb9c1bd6034d97edb935848f1e094e 344 Pfam PF13677 Membrane MotB of proton-channel complex MotA/MotB 18 66 9.7E-17 T 01-11-2018 IPR025713 Motility protein B, N-terminal domain CDA09_05710 5ceb9c1bd6034d97edb935848f1e094e 344 SUPERFAMILY SSF103088 178 286 1.03E-16 T 01-11-2018 IPR036737 OmpA-like domain superfamily CDA09_05710 5ceb9c1bd6034d97edb935848f1e094e 344 Gene3D G3DSA:3.30.1330.60 130 304 1.6E-50 T 01-11-2018 IPR036737 OmpA-like domain superfamily CDA09_05070 5e32e3f2ee5093ee0186800fb37ea925 185 Pfam PF12276 Protein of unknown function (DUF3617) 13 176 6.1E-33 T 01-11-2018 IPR022061 Protein of unknown function DUF3617 CDA09_19325 4ad838d9d0836e1273b6f8bb01098a81 232 TIGRFAM TIGR02429 pcaI_scoA_fam: 3-oxoacid CoA-transferase, A subunit 2 216 1.2E-79 T 01-11-2018 IPR012792 3-oxoacid CoA-transferase, subunit A GO:0008410 Reactome: R-HSA-77108 CDA09_19325 4ad838d9d0836e1273b6f8bb01098a81 232 Gene3D G3DSA:3.40.1080.10 1 227 3.7E-94 T 01-11-2018 CDA09_19325 4ad838d9d0836e1273b6f8bb01098a81 232 ProSitePatterns PS01273 Coenzyme A transferases signature 1. 18 33 - T 01-11-2018 IPR004163 Coenzyme A transferase binding site GO:0008410 Reactome: R-HSA-77108 CDA09_19325 4ad838d9d0836e1273b6f8bb01098a81 232 SMART SM00882 5 217 4.4E-91 T 01-11-2018 IPR004165 Coenzyme A transferase family I GO:0008410 Reactome: R-HSA-77108 CDA09_19325 4ad838d9d0836e1273b6f8bb01098a81 232 Pfam PF01144 Coenzyme A transferase 8 217 2.3E-79 T 01-11-2018 IPR004165 Coenzyme A transferase family I GO:0008410 Reactome: R-HSA-77108 CDA09_19325 4ad838d9d0836e1273b6f8bb01098a81 232 SUPERFAMILY SSF100950 11 227 8.37E-88 T 01-11-2018 IPR037171 NagB/RpiA transferase-like CDA09_00750 3ad034daa408ee34435cc913319de974 237 Pfam PF00005 ABC transporter 21 165 3.5E-30 T 01-11-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 CDA09_00750 3ad034daa408ee34435cc913319de974 237 SUPERFAMILY SSF52540 4 234 1.67E-58 T 01-11-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CDA09_00750 3ad034daa408ee34435cc913319de974 237 Gene3D G3DSA:3.40.50.300 2 237 2.4E-64 T 01-11-2018 CDA09_00750 3ad034daa408ee34435cc913319de974 237 SMART SM00382 29 216 1.5E-9 T 01-11-2018 IPR003593 AAA+ ATPase domain CDA09_00750 3ad034daa408ee34435cc913319de974 237 ProSitePatterns PS00211 ABC transporters family signature. 138 152 - T 01-11-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 CDA09_00750 3ad034daa408ee34435cc913319de974 237 PIRSF PIRSF039137 1 237 3.6E-104 T 01-11-2018 IPR030660 High-affinity branched-chain amino acid transport ATP-binding protein GO:0015658|GO:0015803 CDA09_07150 b5274144b1807016b49844647e36977e 386 Hamap MF_01693 8-amino-7-oxononanoate synthase [bioF]. 2 383 50.814 T 01-11-2018 IPR022834 8-amino-7-oxononanoate synthase, Proteobacteria GO:0008710|GO:0009102 KEGG: 00780+2.3.1.47|MetaCyc: PWY-6519|MetaCyc: PWY-6578|MetaCyc: PWY-7147 CDA09_07150 b5274144b1807016b49844647e36977e 386 Gene3D G3DSA:3.40.640.10 56 284 2.0E-134 T 01-11-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 CDA09_07150 b5274144b1807016b49844647e36977e 386 TIGRFAM TIGR00858 bioF: 8-amino-7-oxononanoate synthase 19 379 8.8E-147 T 01-11-2018 IPR004723 8-amino-7-oxononanoate synthase, Archaea/Proteobacteria type GO:0008710|GO:0009102 KEGG: 00780+2.3.1.47|MetaCyc: PWY-6519|MetaCyc: PWY-6578|MetaCyc: PWY-7147 CDA09_07150 b5274144b1807016b49844647e36977e 386 SUPERFAMILY SSF53383 4 380 1.46E-108 T 01-11-2018 IPR015424 Pyridoxal phosphate-dependent transferase CDA09_07150 b5274144b1807016b49844647e36977e 386 Gene3D G3DSA:3.90.1150.10 36 374 2.0E-134 T 01-11-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 CDA09_07150 b5274144b1807016b49844647e36977e 386 Pfam PF00155 Aminotransferase class I and II 39 379 3.3E-62 T 01-11-2018 IPR004839 Aminotransferase, class I/classII GO:0009058|GO:0030170 CDA09_21175 ec9224a9f5ce74e1d58f5a05de749494 161 ProSitePatterns PS00498 Tyrosinase and hemocyanins CuB-binding region signature. 136 147 - T 01-11-2018 IPR002227 Tyrosinase copper-binding domain GO:0016491 Reactome: R-HSA-5662702 CDA09_01080 7e2bcdb45ac88f571c2575ebdded8bf1 156 Pfam PF07963 Prokaryotic N-terminal methylation motif 1 26 1.9E-7 T 01-11-2018 IPR012902 Prokaryotic N-terminal methylation site CDA09_01080 7e2bcdb45ac88f571c2575ebdded8bf1 156 Gene3D G3DSA:3.30.700.10 7 90 1.9E-9 T 01-11-2018 CDA09_01080 7e2bcdb45ac88f571c2575ebdded8bf1 156 ProSitePatterns PS00409 Prokaryotic N-terminal methylation site. 5 25 - T 01-11-2018 IPR012902 Prokaryotic N-terminal methylation site CDA09_01080 7e2bcdb45ac88f571c2575ebdded8bf1 156 PRINTS PR00813 Bacterial general secretion pathway protein G signature 42 60 6.3E-7 T 01-11-2018 IPR000983 Bacterial general secretion pathway protein G-type pilin GO:0008565|GO:0015627|GO:0015628 CDA09_01080 7e2bcdb45ac88f571c2575ebdded8bf1 156 PRINTS PR00813 Bacterial general secretion pathway protein G signature 6 31 6.3E-7 T 01-11-2018 IPR000983 Bacterial general secretion pathway protein G-type pilin GO:0008565|GO:0015627|GO:0015628 CDA09_01080 7e2bcdb45ac88f571c2575ebdded8bf1 156 TIGRFAM TIGR02532 IV_pilin_GFxxxE: prepilin-type N-terminal cleavage/methylation domain 5 27 9.9E-7 T 01-11-2018 IPR012902 Prokaryotic N-terminal methylation site CDA09_01080 7e2bcdb45ac88f571c2575ebdded8bf1 156 SUPERFAMILY SSF54523 7 110 2.67E-15 T 01-11-2018 CDA09_10930 3af3e08d5bd92edfdf98adbe525eedb0 403 SUPERFAMILY SSF52540 43 271 3.6E-77 T 01-11-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CDA09_10930 3af3e08d5bd92edfdf98adbe525eedb0 403 SUPERFAMILY SSF54631 295 397 7.75E-11 T 01-11-2018 CDA09_10930 3af3e08d5bd92edfdf98adbe525eedb0 403 TIGRFAM TIGR01186 proV: glycine betaine/L-proline transport ATP binding subunit 37 396 1.3E-128 T 01-11-2018 IPR005892 Glycine betaine transport ATP-binding subunit GO:0005524|GO:0016020|GO:0031460 CDA09_10930 3af3e08d5bd92edfdf98adbe525eedb0 403 Gene3D G3DSA:3.40.50.300 35 286 5.0E-80 T 01-11-2018 CDA09_10930 3af3e08d5bd92edfdf98adbe525eedb0 403 SMART SM00382 53 250 2.1E-18 T 01-11-2018 IPR003593 AAA+ ATPase domain CDA09_10930 3af3e08d5bd92edfdf98adbe525eedb0 403 Pfam PF00005 ABC transporter 45 192 7.2E-33 T 01-11-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 CDA09_10930 3af3e08d5bd92edfdf98adbe525eedb0 403 ProSitePatterns PS00211 ABC transporters family signature. 165 179 - T 01-11-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 CDA09_12805 fc568778c5be3c8a376b0bcb6877c14b 693 TIGRFAM TIGR03705 poly_P_kin: polyphosphate kinase 1 15 686 3.1E-291 T 01-11-2018 IPR003414 Polyphosphate kinase GO:0006799|GO:0008976|GO:0009358 KEGG: 00190+2.7.4.1 CDA09_12805 fc568778c5be3c8a376b0bcb6877c14b 693 SUPERFAMILY SSF56024 510 686 2.47E-65 T 01-11-2018 CDA09_12805 fc568778c5be3c8a376b0bcb6877c14b 693 Gene3D G3DSA:3.30.870.10 326 509 2.5E-73 T 01-11-2018 CDA09_12805 fc568778c5be3c8a376b0bcb6877c14b 693 Hamap MF_00347 Polyphosphate kinase [ppk]. 12 691 27.687 T 01-11-2018 IPR003414 Polyphosphate kinase GO:0006799|GO:0008976|GO:0009358 KEGG: 00190+2.7.4.1 CDA09_12805 fc568778c5be3c8a376b0bcb6877c14b 693 SUPERFAMILY SSF143724 118 323 7.06E-66 T 01-11-2018 CDA09_12805 fc568778c5be3c8a376b0bcb6877c14b 693 PIRSF PIRSF015589 1 692 8.5E-272 T 01-11-2018 IPR003414 Polyphosphate kinase GO:0006799|GO:0008976|GO:0009358 KEGG: 00190+2.7.4.1 CDA09_12805 fc568778c5be3c8a376b0bcb6877c14b 693 Pfam PF02503 Polyphosphate kinase middle domain 130 331 9.5E-64 T 01-11-2018 IPR024953 Polyphosphate kinase middle domain KEGG: 00190+2.7.4.1 CDA09_12805 fc568778c5be3c8a376b0bcb6877c14b 693 Gene3D G3DSA:3.30.870.10 510 690 1.1E-61 T 01-11-2018 CDA09_12805 fc568778c5be3c8a376b0bcb6877c14b 693 Pfam PF13090 Polyphosphate kinase C-terminal domain 340 683 1.3E-148 T 01-11-2018 IPR025200 Polyphosphate kinase C-terminal domain KEGG: 00190+2.7.4.1 CDA09_12805 fc568778c5be3c8a376b0bcb6877c14b 693 SUPERFAMILY SSF56024 324 503 9.68E-59 T 01-11-2018 CDA09_12805 fc568778c5be3c8a376b0bcb6877c14b 693 SUPERFAMILY SSF140356 12 116 6.02E-36 T 01-11-2018 IPR036832 Polyphosphate kinase N-terminal domain superfamily KEGG: 00190+2.7.4.1 CDA09_12805 fc568778c5be3c8a376b0bcb6877c14b 693 Gene3D G3DSA:3.30.1840.10 8 322 1.3E-102 T 01-11-2018 IPR036830 Polyphosphate kinase middle domain superfamily KEGG: 00190+2.7.4.1 CDA09_12805 fc568778c5be3c8a376b0bcb6877c14b 693 Pfam PF13089 Polyphosphate kinase N-terminal domain 15 120 1.3E-34 T 01-11-2018 IPR025198 Polyphosphate kinase N-terminal domain KEGG: 00190+2.7.4.1 CDA09_11105 43dc7cc6b1f07db62a76f8b56211fc68 293 SUPERFAMILY SSF55021 10 84 1.42E-8 T 01-11-2018 CDA09_11105 43dc7cc6b1f07db62a76f8b56211fc68 293 Hamap MF_01927 Formyltetrahydrofolate deformylase [purU]. 8 292 46.738 T 01-11-2018 IPR004810 Formyltetrahydrofolate deformylase GO:0006189|GO:0008864 KEGG: 00630+3.5.1.10|KEGG: 00670+3.5.1.10|MetaCyc: PWY-2201|MetaCyc: PWY-5497|MetaCyc: PWY-7909 CDA09_11105 43dc7cc6b1f07db62a76f8b56211fc68 293 PIRSF PIRSF036480 8 293 1.4E-109 T 01-11-2018 CDA09_11105 43dc7cc6b1f07db62a76f8b56211fc68 293 Pfam PF00551 Formyl transferase 98 273 2.7E-34 T 01-11-2018 IPR002376 Formyl transferase, N-terminal GO:0009058|GO:0016742 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 CDA09_11105 43dc7cc6b1f07db62a76f8b56211fc68 293 PRINTS PR01575 Formyltetrahydrofolate deformylase signature 45 57 1.3E-48 T 01-11-2018 IPR004810 Formyltetrahydrofolate deformylase GO:0006189|GO:0008864 KEGG: 00630+3.5.1.10|KEGG: 00670+3.5.1.10|MetaCyc: PWY-2201|MetaCyc: PWY-5497|MetaCyc: PWY-7909 CDA09_11105 43dc7cc6b1f07db62a76f8b56211fc68 293 PRINTS PR01575 Formyltetrahydrofolate deformylase signature 244 266 1.3E-48 T 01-11-2018 IPR004810 Formyltetrahydrofolate deformylase GO:0006189|GO:0008864 KEGG: 00630+3.5.1.10|KEGG: 00670+3.5.1.10|MetaCyc: PWY-2201|MetaCyc: PWY-5497|MetaCyc: PWY-7909 CDA09_11105 43dc7cc6b1f07db62a76f8b56211fc68 293 PRINTS PR01575 Formyltetrahydrofolate deformylase signature 266 291 1.3E-48 T 01-11-2018 IPR004810 Formyltetrahydrofolate deformylase GO:0006189|GO:0008864 KEGG: 00630+3.5.1.10|KEGG: 00670+3.5.1.10|MetaCyc: PWY-2201|MetaCyc: PWY-5497|MetaCyc: PWY-7909 CDA09_11105 43dc7cc6b1f07db62a76f8b56211fc68 293 PRINTS PR01575 Formyltetrahydrofolate deformylase signature 98 120 1.3E-48 T 01-11-2018 IPR004810 Formyltetrahydrofolate deformylase GO:0006189|GO:0008864 KEGG: 00630+3.5.1.10|KEGG: 00670+3.5.1.10|MetaCyc: PWY-2201|MetaCyc: PWY-5497|MetaCyc: PWY-7909 CDA09_11105 43dc7cc6b1f07db62a76f8b56211fc68 293 PRINTS PR01575 Formyltetrahydrofolate deformylase signature 13 39 1.3E-48 T 01-11-2018 IPR004810 Formyltetrahydrofolate deformylase GO:0006189|GO:0008864 KEGG: 00630+3.5.1.10|KEGG: 00670+3.5.1.10|MetaCyc: PWY-2201|MetaCyc: PWY-5497|MetaCyc: PWY-7909 CDA09_11105 43dc7cc6b1f07db62a76f8b56211fc68 293 PRINTS PR01575 Formyltetrahydrofolate deformylase signature 120 147 1.3E-48 T 01-11-2018 IPR004810 Formyltetrahydrofolate deformylase GO:0006189|GO:0008864 KEGG: 00630+3.5.1.10|KEGG: 00670+3.5.1.10|MetaCyc: PWY-2201|MetaCyc: PWY-5497|MetaCyc: PWY-7909 CDA09_11105 43dc7cc6b1f07db62a76f8b56211fc68 293 TIGRFAM TIGR00655 PurU: formyltetrahydrofolate deformylase 12 292 1.2E-98 T 01-11-2018 IPR004810 Formyltetrahydrofolate deformylase GO:0006189|GO:0008864 KEGG: 00630+3.5.1.10|KEGG: 00670+3.5.1.10|MetaCyc: PWY-2201|MetaCyc: PWY-5497|MetaCyc: PWY-7909 CDA09_11105 43dc7cc6b1f07db62a76f8b56211fc68 293 Gene3D G3DSA:3.40.50.170 97 292 1.3E-73 T 01-11-2018 CDA09_11105 43dc7cc6b1f07db62a76f8b56211fc68 293 SUPERFAMILY SSF53328 98 293 5.63E-63 T 01-11-2018 IPR036477 Formyl transferase, N-terminal domain superfamily GO:0009058|GO:0016742 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 CDA09_11105 43dc7cc6b1f07db62a76f8b56211fc68 293 Gene3D G3DSA:3.30.70.260 2 96 9.1E-17 T 01-11-2018 CDA09_01455 5e83f0fbf3c827ba245a8bddf702caa4 266 SUPERFAMILY SSF48695 36 141 9.9E-7 T 01-11-2018 IPR036280 Multiheme cytochrome superfamily CDA09_01455 5e83f0fbf3c827ba245a8bddf702caa4 266 Pfam PF09699 Doubled CXXCH motif (Paired_CXXCH_1) 229 265 2.5E-5 T 01-11-2018 IPR010177 Doubled CXXCH motif CDA09_01455 5e83f0fbf3c827ba245a8bddf702caa4 266 SUPERFAMILY SSF48695 14 264 9.33E-11 T 01-11-2018 IPR036280 Multiheme cytochrome superfamily CDA09_06645 10de3e9c519b482d4b9541e3821bf156 166 Pfam PF10604 Polyketide cyclase / dehydrase and lipid transport 18 106 7.9E-8 T 01-11-2018 IPR019587 Polyketide cyclase/dehydrase CDA09_06645 10de3e9c519b482d4b9541e3821bf156 166 Gene3D G3DSA:3.30.530.20 15 146 2.7E-15 T 01-11-2018 IPR023393 START-like domain superfamily CDA09_06645 10de3e9c519b482d4b9541e3821bf156 166 SUPERFAMILY SSF55961 9 145 2.13E-21 T 01-11-2018 CDA09_16790 ac90560ed09c672bde8a2ef70db1b4ef 153 Gene3D G3DSA:1.10.1660.10 1 127 1.4E-32 T 01-11-2018 CDA09_16790 ac90560ed09c672bde8a2ef70db1b4ef 153 SMART SM00422 4 73 1.4E-20 T 01-11-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 CDA09_16790 ac90560ed09c672bde8a2ef70db1b4ef 153 Pfam PF00376 MerR family regulatory protein 5 31 3.4E-7 T 01-11-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 CDA09_16790 ac90560ed09c672bde8a2ef70db1b4ef 153 Pfam PF09278 MerR, DNA binding 47 109 3.8E-18 T 01-11-2018 IPR015358 Transcription regulator MerR, DNA binding CDA09_16790 ac90560ed09c672bde8a2ef70db1b4ef 153 PRINTS PR00040 MerR bacterial regulatory protein HTH signature 5 16 3.0E-18 T 01-11-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 CDA09_16790 ac90560ed09c672bde8a2ef70db1b4ef 153 PRINTS PR00040 MerR bacterial regulatory protein HTH signature 40 60 3.0E-18 T 01-11-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 CDA09_16790 ac90560ed09c672bde8a2ef70db1b4ef 153 PRINTS PR00040 MerR bacterial regulatory protein HTH signature 16 29 3.0E-18 T 01-11-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 CDA09_16790 ac90560ed09c672bde8a2ef70db1b4ef 153 SUPERFAMILY SSF46955 4 127 1.98E-29 T 01-11-2018 IPR009061 Putative DNA-binding domain superfamily CDA09_01715 e22a7a71d63cb77a78922399bc9b5c0e 361 SUPERFAMILY SSF52343 101 249 2.88E-32 T 01-11-2018 IPR039261 Ferredoxin-NADP reductase (FNR), nucleotide-binding domain CDA09_01715 e22a7a71d63cb77a78922399bc9b5c0e 361 Pfam PF00111 2Fe-2S iron-sulfur cluster binding domain 277 349 4.5E-14 T 01-11-2018 IPR001041 2Fe-2S ferredoxin-type iron-sulfur binding domain GO:0009055|GO:0051536 CDA09_01715 e22a7a71d63cb77a78922399bc9b5c0e 361 SUPERFAMILY SSF63380 5 111 3.4E-25 T 01-11-2018 IPR017938 Riboflavin synthase-like beta-barrel CDA09_01715 e22a7a71d63cb77a78922399bc9b5c0e 361 TIGRFAM TIGR02160 PA_CoA_Oxy5: phenylacetate-CoA oxygenase/reductase, PaaK subunit 10 359 5.4E-176 T 01-11-2018 IPR011884 Phenylacetate-CoA oxygenase/reductase, PaaK subunit GO:0010124 CDA09_01715 e22a7a71d63cb77a78922399bc9b5c0e 361 Pfam PF00970 Oxidoreductase FAD-binding domain 13 111 3.8E-12 T 01-11-2018 IPR008333 Flavoprotein pyridine nucleotide cytochrome reductase-like, FAD-binding domain Reactome: R-HSA-1237044 CDA09_01715 e22a7a71d63cb77a78922399bc9b5c0e 361 PRINTS PR00410 Phenol hydroxylase reductase family signature 219 227 4.0E-6 T 01-11-2018 IPR001221 Phenol hydroxylase reductase GO:0055114 CDA09_01715 e22a7a71d63cb77a78922399bc9b5c0e 361 PRINTS PR00410 Phenol hydroxylase reductase family signature 42 54 4.0E-6 T 01-11-2018 IPR001221 Phenol hydroxylase reductase GO:0055114 CDA09_01715 e22a7a71d63cb77a78922399bc9b5c0e 361 PRINTS PR00410 Phenol hydroxylase reductase family signature 123 142 4.0E-6 T 01-11-2018 IPR001221 Phenol hydroxylase reductase GO:0055114 CDA09_01715 e22a7a71d63cb77a78922399bc9b5c0e 361 Gene3D G3DSA:3.40.50.80 115 254 4.3E-28 T 01-11-2018 IPR039261 Ferredoxin-NADP reductase (FNR), nucleotide-binding domain CDA09_01715 e22a7a71d63cb77a78922399bc9b5c0e 361 Gene3D G3DSA:3.10.20.30 255 361 4.0E-26 T 01-11-2018 IPR012675 Beta-grasp domain superfamily CDA09_01715 e22a7a71d63cb77a78922399bc9b5c0e 361 Gene3D G3DSA:2.40.30.10 2 106 6.1E-22 T 01-11-2018 CDA09_01715 e22a7a71d63cb77a78922399bc9b5c0e 361 Pfam PF00175 Oxidoreductase NAD-binding domain 126 232 5.6E-14 T 01-11-2018 IPR001433 Oxidoreductase FAD/NAD(P)-binding GO:0016491|GO:0055114 CDA09_01715 e22a7a71d63cb77a78922399bc9b5c0e 361 SUPERFAMILY SSF54292 243 357 6.47E-27 T 01-11-2018 IPR036010 2Fe-2S ferredoxin-like superfamily GO:0009055|GO:0051536 CDA09_12070 00a65abdbfa605ec5dcf96745638366a 253 SMART SM00382 30 224 2.8E-5 T 01-11-2018 IPR003593 AAA+ ATPase domain CDA09_12070 00a65abdbfa605ec5dcf96745638366a 253 Pfam PF00005 ABC transporter 22 176 1.2E-29 T 01-11-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 CDA09_12070 00a65abdbfa605ec5dcf96745638366a 253 SUPERFAMILY SSF52540 4 245 4.65E-59 T 01-11-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CDA09_12070 00a65abdbfa605ec5dcf96745638366a 253 Gene3D G3DSA:3.40.50.300 2 243 3.0E-56 T 01-11-2018 CDA09_17930 e4a32135a02cc576431567ebab29240a 123 Gene3D G3DSA:3.40.50.2300 1 122 5.2E-37 T 01-11-2018 CDA09_17930 e4a32135a02cc576431567ebab29240a 123 Pfam PF00072 Response regulator receiver domain 4 114 2.2E-30 T 01-11-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 CDA09_17930 e4a32135a02cc576431567ebab29240a 123 SUPERFAMILY SSF52172 1 118 5.55E-37 T 01-11-2018 IPR011006 CheY-like superfamily CDA09_17930 e4a32135a02cc576431567ebab29240a 123 SMART SM00448 1 113 3.2E-34 T 01-11-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 CDA09_05215 9fc6fbb7e8776677a690f8169004b98b 417 Gene3D G3DSA:2.170.190.11 59 152 2.3E-140 T 01-11-2018 CDA09_05215 9fc6fbb7e8776677a690f8169004b98b 417 Pfam PF03453 MoeA N-terminal region (domain I and II) 18 178 3.8E-42 T 01-11-2018 IPR005110 MoeA, N-terminal and linker domain GO:0032324 KEGG: 00790+2.10.1.1|MetaCyc: PWY-6823|Reactome: R-HSA-947581 CDA09_05215 9fc6fbb7e8776677a690f8169004b98b 417 Gene3D G3DSA:3.90.105.10 36 185 2.3E-140 T 01-11-2018 CDA09_05215 9fc6fbb7e8776677a690f8169004b98b 417 Pfam PF00994 Probable molybdopterin binding domain 193 327 1.2E-28 T 01-11-2018 IPR001453 MoaB/Mog domain CDA09_05215 9fc6fbb7e8776677a690f8169004b98b 417 Pfam PF03454 MoeA C-terminal region (domain IV) 343 413 1.9E-21 T 01-11-2018 IPR005111 MoeA, C-terminal, domain IV GO:0032324 KEGG: 00790+2.10.1.1|MetaCyc: PWY-6823|Reactome: R-HSA-947581 CDA09_05215 9fc6fbb7e8776677a690f8169004b98b 417 SUPERFAMILY SSF53218 188 332 5.1E-44 T 01-11-2018 IPR036425 MoaB/Mog-like domain superfamily CDA09_05215 9fc6fbb7e8776677a690f8169004b98b 417 SUPERFAMILY SSF63867 340 416 6.67E-23 T 01-11-2018 IPR036688 MoeA, C-terminal, domain IV superfamily GO:0032324 KEGG: 00790+2.10.1.1|MetaCyc: PWY-6823|Reactome: R-HSA-947581 CDA09_05215 9fc6fbb7e8776677a690f8169004b98b 417 SUPERFAMILY SSF63882 15 187 3.92E-54 T 01-11-2018 IPR036135 MoeA, N-terminal and linker domain superfamily GO:0032324 KEGG: 00790+2.10.1.1|MetaCyc: PWY-6823|Reactome: R-HSA-947581 CDA09_05215 9fc6fbb7e8776677a690f8169004b98b 417 Gene3D G3DSA:2.40.340.10 339 408 2.3E-140 T 01-11-2018 IPR036688 MoeA, C-terminal, domain IV superfamily GO:0032324 KEGG: 00790+2.10.1.1|MetaCyc: PWY-6823|Reactome: R-HSA-947581 CDA09_05215 9fc6fbb7e8776677a690f8169004b98b 417 SMART SM00852 191 328 3.3E-42 T 01-11-2018 IPR001453 MoaB/Mog domain CDA09_05215 9fc6fbb7e8776677a690f8169004b98b 417 Gene3D G3DSA:3.40.980.10 186 338 2.3E-140 T 01-11-2018 IPR036425 MoaB/Mog-like domain superfamily CDA09_05215 9fc6fbb7e8776677a690f8169004b98b 417 TIGRFAM TIGR00177 molyb_syn: molybdenum cofactor synthesis domain 188 323 8.9E-33 T 01-11-2018 IPR001453 MoaB/Mog domain CDA09_05215 9fc6fbb7e8776677a690f8169004b98b 417 ProSitePatterns PS01079 Molybdenum cofactor biosynthesis proteins signature 2. 264 297 - T 01-11-2018 IPR008284 Molybdenum cofactor biosynthesis, conserved site GO:0006777 Reactome: R-HSA-947581 CDA09_18045 adc42f4a8a63735e1def4c97a9615508 421 SUPERFAMILY SSF56037 307 420 1.54E-19 T 01-11-2018 CDA09_18045 adc42f4a8a63735e1def4c97a9615508 421 Pfam PF11734 TilS substrate C-terminal domain 353 416 1.1E-14 T 01-11-2018 IPR012796 Lysidine-tRNA(Ile) synthetase, C-terminal GO:0000166|GO:0005524|GO:0005737|GO:0008033|GO:0016879 CDA09_18045 adc42f4a8a63735e1def4c97a9615508 421 Hamap MF_01161 tRNA(Ile)-lysidine synthase [tilS]. 2 289 21.72 T 01-11-2018 IPR012094 tRNA(Ile)-lysidine synthase GO:0000166|GO:0005524|GO:0005737|GO:0008033|GO:0016879 CDA09_18045 adc42f4a8a63735e1def4c97a9615508 421 SMART SM00977 346 419 1.2E-13 T 01-11-2018 IPR012796 Lysidine-tRNA(Ile) synthetase, C-terminal GO:0000166|GO:0005524|GO:0005737|GO:0008033|GO:0016879 CDA09_18045 adc42f4a8a63735e1def4c97a9615508 421 Pfam PF09179 TilS substrate binding domain 231 297 4.2E-8 T 01-11-2018 IPR015262 tRNA(Ile)-lysidine synthase , substrate-binding domain GO:0000166|GO:0005524|GO:0005737|GO:0008033|GO:0016879 CDA09_18045 adc42f4a8a63735e1def4c97a9615508 421 TIGRFAM TIGR02433 lysidine_TilS_C: tRNA(Ile)-lysidine synthetase, C-terminal domain 351 388 4.4E-6 T 01-11-2018 IPR012796 Lysidine-tRNA(Ile) synthetase, C-terminal GO:0000166|GO:0005524|GO:0005737|GO:0008033|GO:0016879 CDA09_18045 adc42f4a8a63735e1def4c97a9615508 421 SUPERFAMILY SSF52402 7 218 3.53E-57 T 01-11-2018 CDA09_18045 adc42f4a8a63735e1def4c97a9615508 421 TIGRFAM TIGR02432 lysidine_TilS_N: tRNA(Ile)-lysidine synthetase 13 188 3.6E-44 T 01-11-2018 IPR012795 tRNA(Ile)-lysidine synthase, N-terminal GO:0000166|GO:0005524|GO:0005737|GO:0008033|GO:0016879 CDA09_18045 adc42f4a8a63735e1def4c97a9615508 421 SUPERFAMILY SSF82829 224 300 8.63E-12 T 01-11-2018 CDA09_18045 adc42f4a8a63735e1def4c97a9615508 421 Gene3D G3DSA:3.40.50.620 3 218 2.3E-64 T 01-11-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold CDA09_18045 adc42f4a8a63735e1def4c97a9615508 421 Pfam PF01171 PP-loop family 13 184 2.2E-45 T 01-11-2018 IPR011063 tRNA(Ile)-lysidine/2-thiocytidine synthase, N-terminal Reactome: R-HSA-6782315 CDA09_12315 578494c47c6d9ac1993a957ab3930b74 399 SUPERFAMILY SSF103473 10 388 2.62E-42 T 01-11-2018 IPR036259 MFS transporter superfamily CDA09_12315 578494c47c6d9ac1993a957ab3930b74 399 Pfam PF06779 Uncharacterised MFS-type transporter YbfB 19 378 2.1E-72 T 01-11-2018 IPR010645 Uncharacterised MFS-type transporter YbfB CDA09_12315 578494c47c6d9ac1993a957ab3930b74 399 Gene3D G3DSA:1.20.1250.20 3 383 1.2E-32 T 01-11-2018 CDA09_13290 abc94e674e3d733df8def3d0570c0e4a 342 SUPERFAMILY SSF51395 1 331 5.33E-99 T 01-11-2018 CDA09_13290 abc94e674e3d733df8def3d0570c0e4a 342 TIGRFAM TIGR01036 pyrD_sub2: dihydroorotate dehydrogenase (fumarate) 3 333 1.5E-125 T 01-11-2018 IPR005719 Dihydroorotate dehydrogenase, class 2 GO:0004152|GO:0006207|GO:0016020|GO:0055114 KEGG: 00240+1.3.5.2|MetaCyc: PWY-5686|Reactome: R-HSA-500753 CDA09_13290 abc94e674e3d733df8def3d0570c0e4a 342 ProSitePatterns PS00911 Dihydroorotate dehydrogenase signature 1. 77 96 - T 01-11-2018 IPR001295 Dihydroorotate dehydrogenase, conserved site GO:0004152|GO:0006207|GO:0055114 Reactome: R-HSA-500753 CDA09_13290 abc94e674e3d733df8def3d0570c0e4a 342 Pfam PF01180 Dihydroorotate dehydrogenase 44 329 2.5E-80 T 01-11-2018 IPR005720 Dihydroorotate dehydrogenase domain GO:0005737|GO:0016627|GO:0055114 CDA09_13290 abc94e674e3d733df8def3d0570c0e4a 342 Gene3D G3DSA:3.20.20.70 2 332 5.1E-127 T 01-11-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 CDA09_13290 abc94e674e3d733df8def3d0570c0e4a 342 PIRSF PIRSF000164 12 337 9.2E-87 T 01-11-2018 IPR012135 Dihydroorotate dehydrogenase, class 1/ 2 GO:0004152|GO:0006222|GO:0055114 CDA09_13290 abc94e674e3d733df8def3d0570c0e4a 342 ProSitePatterns PS00912 Dihydroorotate dehydrogenase signature 2. 289 309 - T 01-11-2018 IPR001295 Dihydroorotate dehydrogenase, conserved site GO:0004152|GO:0006207|GO:0055114 Reactome: R-HSA-500753 CDA09_13290 abc94e674e3d733df8def3d0570c0e4a 342 Hamap MF_00225 Dihydroorotate dehydrogenase (quinone) [pyrD]. 2 333 49.546 T 01-11-2018 IPR005719 Dihydroorotate dehydrogenase, class 2 GO:0004152|GO:0006207|GO:0016020|GO:0055114 KEGG: 00240+1.3.5.2|MetaCyc: PWY-5686|Reactome: R-HSA-500753 CDA09_06455 322db461d277275749677cbcdb40819a 259 Gene3D G3DSA:3.20.20.150 1 258 7.1E-82 T 01-11-2018 CDA09_06455 322db461d277275749677cbcdb40819a 259 TIGRFAM TIGR03234 OH-pyruv-isom: hydroxypyruvate isomerase 2 254 2.9E-117 T 01-11-2018 IPR017643 Hydroxypyruvate isomerase KEGG: 00630+5.3.1.22 CDA09_06455 322db461d277275749677cbcdb40819a 259 SUPERFAMILY SSF51658 1 257 1.31E-86 T 01-11-2018 IPR036237 Xylose isomerase-like superfamily CDA09_06455 322db461d277275749677cbcdb40819a 259 PIRSF PIRSF006241 1 259 1.8E-95 T 01-11-2018 IPR026040 Hydroxypyruvate isomerase-like CDA09_06455 322db461d277275749677cbcdb40819a 259 Pfam PF01261 Xylose isomerase-like TIM barrel 21 219 5.8E-35 T 01-11-2018 IPR013022 Xylose isomerase-like, TIM barrel domain CDA09_08225 4fc52e7466ac2bb88b21f18460a4d5fa 119 Gene3D G3DSA:2.40.10.300 48 118 3.0E-31 T 01-11-2018 IPR038644 CopK superfamily CDA09_08225 4fc52e7466ac2bb88b21f18460a4d5fa 119 Pfam PF11525 Copper resistance protein K 50 113 1.5E-31 T 01-11-2018 IPR021604 Copper resistance protein K GO:0046872 CDA09_08660 6ed6f306bd5959878aef561b53d397c6 280 Gene3D G3DSA:3.90.850.10 68 280 4.3E-85 T 01-11-2018 IPR036663 Fumarylacetoacetase-like, C-terminal domain superfamily GO:0003824 CDA09_08660 6ed6f306bd5959878aef561b53d397c6 280 Pfam PF01557 Fumarylacetoacetate (FAA) hydrolase family 72 277 1.2E-71 T 01-11-2018 IPR011234 Fumarylacetoacetase-like, C-terminal GO:0003824 CDA09_08660 6ed6f306bd5959878aef561b53d397c6 280 SUPERFAMILY SSF56529 62 278 3.27E-79 T 01-11-2018 IPR036663 Fumarylacetoacetase-like, C-terminal domain superfamily GO:0003824 CDA09_11215 30dc62d016d106917105d3c8c1cdbd64 420 Gene3D G3DSA:3.90.1150.10 10 395 2.7E-188 T 01-11-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 CDA09_11215 30dc62d016d106917105d3c8c1cdbd64 420 ProSitePatterns PS00096 Serine hydroxymethyltransferase pyridoxal-phosphate attachment site. 222 238 - T 01-11-2018 IPR019798 Serine hydroxymethyltransferase, pyridoxal phosphate binding site GO:0030170 KEGG: 00260+2.1.2.1|KEGG: 00460+2.1.2.1|KEGG: 00630+2.1.2.1|KEGG: 00670+2.1.2.1|KEGG: 00680+2.1.2.1|MetaCyc: PWY-1622|MetaCyc: PWY-181|MetaCyc: PWY-2161|MetaCyc: PWY-2201|MetaCyc: PWY-3661|MetaCyc: PWY-3661-1|MetaCyc: PWY-3841|MetaCyc: PWY-5497|Reactome: R-HSA-196757 CDA09_11215 30dc62d016d106917105d3c8c1cdbd64 420 Pfam PF00464 Serine hydroxymethyltransferase 9 386 1.8E-186 T 01-11-2018 IPR039429 Serine hydroxymethyltransferase-like domain KEGG: 00260+2.1.2.1|KEGG: 00460+2.1.2.1|KEGG: 00630+2.1.2.1|KEGG: 00670+2.1.2.1|KEGG: 00680+2.1.2.1|MetaCyc: PWY-1622|MetaCyc: PWY-181|MetaCyc: PWY-2161|MetaCyc: PWY-2201|MetaCyc: PWY-3661|MetaCyc: PWY-3661-1|MetaCyc: PWY-3841|MetaCyc: PWY-5497|Reactome: R-HSA-196757 CDA09_11215 30dc62d016d106917105d3c8c1cdbd64 420 Hamap MF_00051 Serine hydroxymethyltransferase [glyA]. 7 417 53.791 T 01-11-2018 IPR001085 Serine hydroxymethyltransferase GO:0004372|GO:0019264|GO:0030170|GO:0035999 KEGG: 00260+2.1.2.1|KEGG: 00460+2.1.2.1|KEGG: 00630+2.1.2.1|KEGG: 00670+2.1.2.1|KEGG: 00680+2.1.2.1|MetaCyc: PWY-1622|MetaCyc: PWY-181|MetaCyc: PWY-2161|MetaCyc: PWY-2201|MetaCyc: PWY-3661|MetaCyc: PWY-3661-1|MetaCyc: PWY-3841|MetaCyc: PWY-5497|Reactome: R-HSA-196757 CDA09_11215 30dc62d016d106917105d3c8c1cdbd64 420 Gene3D G3DSA:3.40.640.10 37 289 2.7E-188 T 01-11-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 CDA09_11215 30dc62d016d106917105d3c8c1cdbd64 420 SUPERFAMILY SSF53383 5 417 4.95E-188 T 01-11-2018 IPR015424 Pyridoxal phosphate-dependent transferase CDA09_11215 30dc62d016d106917105d3c8c1cdbd64 420 PIRSF PIRSF000412 1 420 5.6E-175 T 01-11-2018 IPR001085 Serine hydroxymethyltransferase GO:0004372|GO:0019264|GO:0030170|GO:0035999 KEGG: 00260+2.1.2.1|KEGG: 00460+2.1.2.1|KEGG: 00630+2.1.2.1|KEGG: 00670+2.1.2.1|KEGG: 00680+2.1.2.1|MetaCyc: PWY-1622|MetaCyc: PWY-181|MetaCyc: PWY-2161|MetaCyc: PWY-2201|MetaCyc: PWY-3661|MetaCyc: PWY-3661-1|MetaCyc: PWY-3841|MetaCyc: PWY-5497|Reactome: R-HSA-196757 CDA09_11200 8afffeb1e3f00c76e1743218607fd355 304 SUPERFAMILY SSF51717 21 280 3.14E-77 T 01-11-2018 IPR011005 Dihydropteroate synthase-like GO:0044237 Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 CDA09_11200 8afffeb1e3f00c76e1743218607fd355 304 Pfam PF00809 Pterin binding enzyme 25 248 1.0E-29 T 01-11-2018 IPR000489 Pterin-binding domain GO:0042558 Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 CDA09_11200 8afffeb1e3f00c76e1743218607fd355 304 Gene3D G3DSA:3.20.20.20 14 281 3.7E-90 T 01-11-2018 IPR011005 Dihydropteroate synthase-like GO:0044237 Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 CDA09_17950 00069d38d005e0d7241d8136a8204be8 187 SUPERFAMILY SSF55068 6 175 9.68E-73 T 01-11-2018 IPR036509 Peptide methionine sulphoxide reductase MsrA superfamily GO:0008113|GO:0055114 Reactome: R-HSA-5676934 CDA09_17950 00069d38d005e0d7241d8136a8204be8 187 TIGRFAM TIGR00401 msrA: peptide-methionine (S)-S-oxide reductase 11 158 1.6E-55 T 01-11-2018 IPR002569 Peptide methionine sulphoxide reductase MsrA GO:0008113|GO:0055114 Reactome: R-HSA-5676934 CDA09_17950 00069d38d005e0d7241d8136a8204be8 187 Gene3D G3DSA:3.30.1060.10 1 174 5.1E-68 T 01-11-2018 IPR036509 Peptide methionine sulphoxide reductase MsrA superfamily GO:0008113|GO:0055114 Reactome: R-HSA-5676934 CDA09_17950 00069d38d005e0d7241d8136a8204be8 187 Hamap MF_01401 Peptide methionine sulfoxide reductase MsrA [msrA]. 10 169 36.08 T 01-11-2018 IPR002569 Peptide methionine sulphoxide reductase MsrA GO:0008113|GO:0055114 Reactome: R-HSA-5676934 CDA09_17950 00069d38d005e0d7241d8136a8204be8 187 Pfam PF01625 Peptide methionine sulfoxide reductase 12 165 3.3E-62 T 01-11-2018 IPR002569 Peptide methionine sulphoxide reductase MsrA GO:0008113|GO:0055114 Reactome: R-HSA-5676934 CDA09_11630 ec9b0e7a3145692a232ce0688106e052 456 TIGRFAM TIGR01409 TAT_signal_seq: Tat (twin-arginine translocation) pathway signal sequence 18 47 4.8E-5 T 01-11-2018 IPR019546 Twin-arginine translocation pathway, signal sequence, bacterial/archaeal CDA09_11630 ec9b0e7a3145692a232ce0688106e052 456 SUPERFAMILY SSF53850 48 448 1.77E-30 T 01-11-2018 CDA09_11630 ec9b0e7a3145692a232ce0688106e052 456 Pfam PF13416 Bacterial extracellular solute-binding protein 72 284 2.9E-6 T 01-11-2018 IPR006059 Bacterial extracellular solute-binding protein CDA09_11630 ec9b0e7a3145692a232ce0688106e052 456 Gene3D G3DSA:3.40.190.10 45 448 3.3E-29 T 01-11-2018 CDA09_16205 0482b63604ff592547f1f6300f88be8a 432 SUPERFAMILY SSF142019 10 235 5.75E-82 T 01-11-2018 IPR037225 NADH-ubiquinone oxidoreductase 51kDa subunit, FMN-binding domain superfamily Reactome: R-HSA-611105|Reactome: R-HSA-6799198 CDA09_16205 0482b63604ff592547f1f6300f88be8a 432 SUPERFAMILY SSF140490 320 418 2.48E-37 T 01-11-2018 IPR037207 NADH-ubiquinone oxidoreductase 51kDa subunit, iron-sulphur binding domain superfamily Reactome: R-HSA-611105|Reactome: R-HSA-6799198 CDA09_16205 0482b63604ff592547f1f6300f88be8a 432 TIGRFAM TIGR01959 nuoF_fam: NADH oxidoreductase (quinone), F subunit 6 410 1.0E-194 T 01-11-2018 IPR011537 NADH ubiquinone oxidoreductase, F subunit GO:0010181|GO:0016651|GO:0051287|GO:0051539|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 CDA09_16205 0482b63604ff592547f1f6300f88be8a 432 Pfam PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit 44 214 2.8E-45 T 01-11-2018 IPR011538 NADH-ubiquinone oxidoreductase 51kDa subunit, FMN-binding domain Reactome: R-HSA-611105|Reactome: R-HSA-6799198 CDA09_16205 0482b63604ff592547f1f6300f88be8a 432 SMART SM00928 324 369 3.3E-24 T 01-11-2018 IPR019575 NADH-ubiquinone oxidoreductase 51kDa subunit, iron-sulphur binding domain GO:0051539 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 CDA09_16205 0482b63604ff592547f1f6300f88be8a 432 Pfam PF10531 SLBB domain 238 286 2.2E-14 T 01-11-2018 IPR019554 Soluble ligand binding domain Reactome: R-HSA-611105|Reactome: R-HSA-6799198 CDA09_16205 0482b63604ff592547f1f6300f88be8a 432 Gene3D G3DSA:3.10.20.600 227 321 1.9E-37 T 01-11-2018 CDA09_16205 0482b63604ff592547f1f6300f88be8a 432 SUPERFAMILY SSF142984 236 319 1.44E-27 T 01-11-2018 CDA09_16205 0482b63604ff592547f1f6300f88be8a 432 ProSitePatterns PS00645 Respiratory-chain NADH dehydrogenase 51 Kd subunit signature 2. 337 348 - T 01-11-2018 IPR001949 NADH:ubiquinone oxidoreductase, 51kDa subunit, conserved site GO:0008137|GO:0010181|GO:0051539|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 CDA09_16205 0482b63604ff592547f1f6300f88be8a 432 Pfam PF10589 NADH-ubiquinone oxidoreductase-F iron-sulfur binding region 326 409 1.8E-28 T 01-11-2018 IPR019575 NADH-ubiquinone oxidoreductase 51kDa subunit, iron-sulphur binding domain GO:0051539 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 CDA09_16205 0482b63604ff592547f1f6300f88be8a 432 Gene3D G3DSA:1.20.1440.230 322 422 2.5E-32 T 01-11-2018 IPR037207 NADH-ubiquinone oxidoreductase 51kDa subunit, iron-sulphur binding domain superfamily Reactome: R-HSA-611105|Reactome: R-HSA-6799198 CDA09_16205 0482b63604ff592547f1f6300f88be8a 432 Gene3D G3DSA:3.40.50.11540 48 225 9.9E-76 T 01-11-2018 IPR037225 NADH-ubiquinone oxidoreductase 51kDa subunit, FMN-binding domain superfamily Reactome: R-HSA-611105|Reactome: R-HSA-6799198 CDA09_11340 2fffab5ab5998a9543b5ae9b629245bf 672 SUPERFAMILY SSF52540 342 575 6.41E-61 T 01-11-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CDA09_11340 2fffab5ab5998a9543b5ae9b629245bf 672 SUPERFAMILY SSF46689 618 662 1.43E-8 T 01-11-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 CDA09_11340 2fffab5ab5998a9543b5ae9b629245bf 672 Gene3D G3DSA:1.10.8.60 506 580 2.5E-12 T 01-11-2018 CDA09_11340 2fffab5ab5998a9543b5ae9b629245bf 672 Pfam PF00158 Sigma-54 interaction domain 339 500 1.2E-59 T 01-11-2018 IPR002078 RNA polymerase sigma factor 54 interaction domain GO:0005524|GO:0006355|GO:0008134 CDA09_11340 2fffab5ab5998a9543b5ae9b629245bf 672 SMART SM00382 353 497 3.5E-8 T 01-11-2018 IPR003593 AAA+ ATPase domain CDA09_11340 2fffab5ab5998a9543b5ae9b629245bf 672 Pfam PF02954 Bacterial regulatory protein, Fis family 623 659 2.6E-9 T 01-11-2018 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 CDA09_11340 2fffab5ab5998a9543b5ae9b629245bf 672 ProSitePatterns PS00675 Sigma-54 interaction domain ATP-binding region A signature. 357 370 - T 01-11-2018 IPR025662 Sigma-54 interaction domain, ATP-binding site 1 CDA09_11340 2fffab5ab5998a9543b5ae9b629245bf 672 Pfam PF01590 GAF domain 70 203 4.0E-8 T 01-11-2018 IPR003018 GAF domain GO:0005515 CDA09_11340 2fffab5ab5998a9543b5ae9b629245bf 672 Gene3D G3DSA:3.40.50.300 330 505 4.2E-56 T 01-11-2018 CDA09_11340 2fffab5ab5998a9543b5ae9b629245bf 672 ProSitePatterns PS00688 Sigma-54 interaction domain C-terminal part signature. 543 552 - T 01-11-2018 IPR025944 Sigma-54 interaction domain, conserved site CDA09_11340 2fffab5ab5998a9543b5ae9b629245bf 672 Gene3D G3DSA:3.30.450.40 16 205 1.4E-51 T 01-11-2018 IPR029016 GAF-like domain superfamily CDA09_11340 2fffab5ab5998a9543b5ae9b629245bf 672 Gene3D G3DSA:1.10.10.60 616 664 1.4E-10 T 01-11-2018 CDA09_11340 2fffab5ab5998a9543b5ae9b629245bf 672 SUPERFAMILY SSF55781 59 201 1.1E-8 T 01-11-2018 CDA09_05580 0d8269fffd5d8e8dc0ff6b6e218817a1 986 SMART SM00086 504 546 1.4E-4 T 01-11-2018 IPR001610 PAC motif CDA09_05580 0d8269fffd5d8e8dc0ff6b6e218817a1 986 SMART SM00086 383 424 420.0 T 01-11-2018 IPR001610 PAC motif CDA09_05580 0d8269fffd5d8e8dc0ff6b6e218817a1 986 SUPERFAMILY SSF55785 437 544 1.21E-28 T 01-11-2018 IPR035965 PAS domain superfamily CDA09_05580 0d8269fffd5d8e8dc0ff6b6e218817a1 986 Gene3D G3DSA:3.20.20.450 731 982 1.1E-98 T 01-11-2018 IPR035919 EAL domain superfamily CDA09_05580 0d8269fffd5d8e8dc0ff6b6e218817a1 986 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 555 716 4.9E-41 T 01-11-2018 IPR000160 GGDEF domain CDA09_05580 0d8269fffd5d8e8dc0ff6b6e218817a1 986 Pfam PF00990 Diguanylate cyclase, GGDEF domain 557 714 2.2E-48 T 01-11-2018 IPR000160 GGDEF domain CDA09_05580 0d8269fffd5d8e8dc0ff6b6e218817a1 986 Pfam PF13426 PAS domain 443 544 1.5E-14 T 01-11-2018 IPR000014 PAS domain CDA09_05580 0d8269fffd5d8e8dc0ff6b6e218817a1 986 Pfam PF03924 CHASE domain 112 201 1.1E-12 T 01-11-2018 IPR006189 CHASE domain CDA09_05580 0d8269fffd5d8e8dc0ff6b6e218817a1 986 SUPERFAMILY SSF55073 562 720 2.04E-50 T 01-11-2018 IPR029787 Nucleotide cyclase CDA09_05580 0d8269fffd5d8e8dc0ff6b6e218817a1 986 SMART SM00052 728 974 3.7E-111 T 01-11-2018 IPR001633 EAL domain CDA09_05580 0d8269fffd5d8e8dc0ff6b6e218817a1 986 SUPERFAMILY SSF55785 304 422 5.96E-11 T 01-11-2018 IPR035965 PAS domain superfamily CDA09_05580 0d8269fffd5d8e8dc0ff6b6e218817a1 986 Pfam PF00563 EAL domain 734 969 1.4E-71 T 01-11-2018 IPR001633 EAL domain CDA09_05580 0d8269fffd5d8e8dc0ff6b6e218817a1 986 Pfam PF08448 PAS fold 319 425 2.4E-8 T 01-11-2018 IPR013656 PAS fold-4 CDA09_05580 0d8269fffd5d8e8dc0ff6b6e218817a1 986 SMART SM00091 432 498 1.8E-8 T 01-11-2018 IPR000014 PAS domain CDA09_05580 0d8269fffd5d8e8dc0ff6b6e218817a1 986 SMART SM00091 311 377 14.0 T 01-11-2018 IPR000014 PAS domain CDA09_05580 0d8269fffd5d8e8dc0ff6b6e218817a1 986 Gene3D G3DSA:3.30.450.20 436 556 2.4E-35 T 01-11-2018 CDA09_05580 0d8269fffd5d8e8dc0ff6b6e218817a1 986 SMART SM00267 546 718 1.8E-64 T 01-11-2018 IPR000160 GGDEF domain CDA09_05580 0d8269fffd5d8e8dc0ff6b6e218817a1 986 Gene3D G3DSA:3.30.70.270 557 730 8.3E-60 T 01-11-2018 CDA09_05580 0d8269fffd5d8e8dc0ff6b6e218817a1 986 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 438 551 1.1E-19 T 01-11-2018 IPR000014 PAS domain CDA09_05580 0d8269fffd5d8e8dc0ff6b6e218817a1 986 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 308 430 1.2E-5 T 01-11-2018 IPR000014 PAS domain CDA09_05580 0d8269fffd5d8e8dc0ff6b6e218817a1 986 Gene3D G3DSA:3.30.450.20 297 435 1.9E-17 T 01-11-2018 CDA09_05580 0d8269fffd5d8e8dc0ff6b6e218817a1 986 SUPERFAMILY SSF141868 734 981 2.09E-87 T 01-11-2018 IPR035919 EAL domain superfamily CDA09_05580 0d8269fffd5d8e8dc0ff6b6e218817a1 986 SMART SM01079 46 228 1.5E-33 T 01-11-2018 IPR006189 CHASE domain CDA09_02980 006de0484646bc1687a67e8e49ae884c 395 Hamap MF_01454 GTPase Obg [obg]. 2 334 48.251 T 01-11-2018 IPR014100 GTP-binding protein Obg/CgtA GO:0000287|GO:0003924|GO:0005525 CDA09_02980 006de0484646bc1687a67e8e49ae884c 395 TIGRFAM TIGR02729 Obg_CgtA: Obg family GTPase CgtA 3 333 9.6E-141 T 01-11-2018 IPR014100 GTP-binding protein Obg/CgtA GO:0000287|GO:0003924|GO:0005525 CDA09_02980 006de0484646bc1687a67e8e49ae884c 395 Pfam PF01018 GTP1/OBG 4 158 8.6E-58 T 01-11-2018 IPR006169 GTP1/OBG domain CDA09_02980 006de0484646bc1687a67e8e49ae884c 395 Pfam PF01926 50S ribosome-binding GTPase 161 285 4.8E-24 T 01-11-2018 IPR006073 GTP binding domain GO:0005525 CDA09_02980 006de0484646bc1687a67e8e49ae884c 395 ProSitePatterns PS00905 GTP1/OBG family signature. 213 226 - T 01-11-2018 IPR006074 GTP1/OBG, conserved site GO:0005525 CDA09_02980 006de0484646bc1687a67e8e49ae884c 395 Gene3D G3DSA:3.40.50.300 159 339 4.1E-51 T 01-11-2018 CDA09_02980 006de0484646bc1687a67e8e49ae884c 395 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 183 201 6.0E-35 T 01-11-2018 IPR006073 GTP binding domain GO:0005525 CDA09_02980 006de0484646bc1687a67e8e49ae884c 395 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 228 246 6.0E-35 T 01-11-2018 IPR006073 GTP binding domain GO:0005525 CDA09_02980 006de0484646bc1687a67e8e49ae884c 395 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 211 226 6.0E-35 T 01-11-2018 IPR006073 GTP binding domain GO:0005525 CDA09_02980 006de0484646bc1687a67e8e49ae884c 395 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 162 182 6.0E-35 T 01-11-2018 IPR006073 GTP binding domain GO:0005525 CDA09_02980 006de0484646bc1687a67e8e49ae884c 395 SUPERFAMILY SSF52540 151 335 1.12E-49 T 01-11-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CDA09_02980 006de0484646bc1687a67e8e49ae884c 395 Gene3D G3DSA:2.70.210.12 1 158 6.6E-58 T 01-11-2018 IPR036726 GTP1/OBG domain superfamily CDA09_02980 006de0484646bc1687a67e8e49ae884c 395 PIRSF PIRSF002401 1 378 1.1E-133 T 01-11-2018 IPR035101 GTP-binding protein, Obg-type CDA09_02980 006de0484646bc1687a67e8e49ae884c 395 SUPERFAMILY SSF82051 2 158 4.32E-56 T 01-11-2018 IPR036726 GTP1/OBG domain superfamily CDA09_08355 9b968c0087112a75743fb05f785b462a 499 ProSitePatterns PS01305 moaA / nifB / pqqE family signature. 70 81 - T 01-11-2018 IPR000385 MoaA/nifB/pqqE, iron-sulphur binding, conserved site GO:0003824|GO:0046872|GO:0051539 KEGG: 00790+4.1.99.22|MetaCyc: PWY-6823|Reactome: R-HSA-947581 CDA09_08355 9b968c0087112a75743fb05f785b462a 499 Gene3D G3DSA:3.30.420.130 378 489 5.1E-27 T 01-11-2018 IPR036105 Dinitrogenase iron-molybdenum cofactor biosynthesis superfamily CDA09_08355 9b968c0087112a75743fb05f785b462a 499 TIGRFAM TIGR01290 nifB: nitrogenase cofactor biosynthesis protein NifB 43 482 1.6E-198 T 01-11-2018 IPR005980 Nitrogenase cofactor biosynthesis protein NifB GO:0009108|GO:0009399 CDA09_08355 9b968c0087112a75743fb05f785b462a 499 SUPERFAMILY SSF53146 381 488 5.1E-29 T 01-11-2018 IPR036105 Dinitrogenase iron-molybdenum cofactor biosynthesis superfamily CDA09_08355 9b968c0087112a75743fb05f785b462a 499 Pfam PF04055 Radical SAM superfamily 70 247 1.4E-27 T 01-11-2018 IPR007197 Radical SAM GO:0003824|GO:0051536 CDA09_08355 9b968c0087112a75743fb05f785b462a 499 SUPERFAMILY SSF102114 59 273 1.57E-35 T 01-11-2018 CDA09_08355 9b968c0087112a75743fb05f785b462a 499 Gene3D G3DSA:3.20.20.70 58 316 1.3E-28 T 01-11-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 CDA09_08355 9b968c0087112a75743fb05f785b462a 499 Pfam PF02579 Dinitrogenase iron-molybdenum cofactor 391 484 9.9E-21 T 01-11-2018 IPR003731 Dinitrogenase iron-molybdenum cofactor biosynthesis CDA09_22155 4da593fef4b28ade000b3e0565718255 671 TIGRFAM TIGR01056 topB: DNA topoisomerase III 1 654 2.5E-217 T 01-11-2018 IPR005738 DNA topoisomerase III GO:0003677|GO:0003916|GO:0006265 CDA09_22155 4da593fef4b28ade000b3e0565718255 671 Gene3D G3DSA:1.10.460.10 156 600 6.3E-145 T 01-11-2018 IPR013824 DNA topoisomerase, type IA, central region, subdomain 1 CDA09_22155 4da593fef4b28ade000b3e0565718255 671 Gene3D G3DSA:1.10.290.10 280 409 6.3E-145 T 01-11-2018 IPR013826 DNA topoisomerase, type IA, central region, subdomain 3 CDA09_22155 4da593fef4b28ade000b3e0565718255 671 SMART SM00493 1 122 3.6E-22 T 01-11-2018 IPR006171 TOPRIM domain CDA09_22155 4da593fef4b28ade000b3e0565718255 671 SUPERFAMILY SSF57783 615 653 5.44E-11 T 01-11-2018 CDA09_22155 4da593fef4b28ade000b3e0565718255 671 ProSitePatterns PS00396 Prokaryotic DNA topoisomerase I active site. 308 323 - T 01-11-2018 IPR023406 DNA topoisomerase, type IA, active site GO:0003917 CDA09_22155 4da593fef4b28ade000b3e0565718255 671 SMART SM00436 122 217 1.3E-33 T 01-11-2018 IPR003601 DNA topoisomerase, type IA, domain 2 GO:0003677|GO:0003916|GO:0006265 CDA09_22155 4da593fef4b28ade000b3e0565718255 671 Pfam PF01396 Topoisomerase DNA binding C4 zinc finger 618 651 3.2E-12 T 01-11-2018 IPR013498 DNA topoisomerase, type IA, zn finger GO:0003677|GO:0003916|GO:0005694|GO:0006265 Reactome: R-HSA-5685938|Reactome: R-HSA-5685942|Reactome: R-HSA-5693554|Reactome: R-HSA-5693568|Reactome: R-HSA-5693579|Reactome: R-HSA-5693607|Reactome: R-HSA-5693616|Reactome: R-HSA-6804756|Reactome: R-HSA-69473|Reactome: R-HSA-912446 CDA09_22155 4da593fef4b28ade000b3e0565718255 671 Gene3D G3DSA:2.70.20.10 211 486 6.3E-145 T 01-11-2018 IPR013825 DNA topoisomerase, type IA, central region, subdomain 2 CDA09_22155 4da593fef4b28ade000b3e0565718255 671 SUPERFAMILY SSF56712 1 604 4.58E-177 T 01-11-2018 IPR023405 DNA topoisomerase, type IA, core domain CDA09_22155 4da593fef4b28ade000b3e0565718255 671 Pfam PF01131 DNA topoisomerase 152 590 1.2E-109 T 01-11-2018 IPR013497 DNA topoisomerase, type IA, central GO:0003677|GO:0003916|GO:0006265 CDA09_22155 4da593fef4b28ade000b3e0565718255 671 SMART SM00437 271 556 6.0E-61 T 01-11-2018 IPR003602 DNA topoisomerase, type IA, DNA-binding domain GO:0003677|GO:0003916|GO:0006265 CDA09_22155 4da593fef4b28ade000b3e0565718255 671 Gene3D G3DSA:3.40.50.140 1 149 2.8E-51 T 01-11-2018 CDA09_22155 4da593fef4b28ade000b3e0565718255 671 Pfam PF01751 Toprim domain 3 129 1.2E-14 T 01-11-2018 IPR006171 TOPRIM domain CDA09_22155 4da593fef4b28ade000b3e0565718255 671 Gene3D G3DSA:3.30.65.10 608 657 1.8E-6 T 01-11-2018 CDA09_22155 4da593fef4b28ade000b3e0565718255 671 PRINTS PR00417 Prokaryotic DNA topoisomerase I signature 395 411 3.7E-25 T 01-11-2018 IPR013497 DNA topoisomerase, type IA, central GO:0003677|GO:0003916|GO:0006265 CDA09_22155 4da593fef4b28ade000b3e0565718255 671 PRINTS PR00417 Prokaryotic DNA topoisomerase I signature 519 533 3.7E-25 T 01-11-2018 IPR013497 DNA topoisomerase, type IA, central GO:0003677|GO:0003916|GO:0006265 CDA09_22155 4da593fef4b28ade000b3e0565718255 671 PRINTS PR00417 Prokaryotic DNA topoisomerase I signature 314 323 3.7E-25 T 01-11-2018 IPR013497 DNA topoisomerase, type IA, central GO:0003677|GO:0003916|GO:0006265 CDA09_22155 4da593fef4b28ade000b3e0565718255 671 PRINTS PR00417 Prokaryotic DNA topoisomerase I signature 96 109 3.7E-25 T 01-11-2018 IPR013497 DNA topoisomerase, type IA, central GO:0003677|GO:0003916|GO:0006265 CDA09_22155 4da593fef4b28ade000b3e0565718255 671 PRINTS PR00417 Prokaryotic DNA topoisomerase I signature 187 205 3.7E-25 T 01-11-2018 IPR013497 DNA topoisomerase, type IA, central GO:0003677|GO:0003916|GO:0006265 CDA09_12265 e3b959682bfb73e64d70d170bbe0501d 214 Pfam PF00072 Response regulator receiver domain 14 125 3.0E-25 T 01-11-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 CDA09_12265 e3b959682bfb73e64d70d170bbe0501d 214 SUPERFAMILY SSF52172 11 138 1.24E-32 T 01-11-2018 IPR011006 CheY-like superfamily CDA09_12265 e3b959682bfb73e64d70d170bbe0501d 214 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 152 166 5.9E-14 T 01-11-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 CDA09_12265 e3b959682bfb73e64d70d170bbe0501d 214 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 166 182 5.9E-14 T 01-11-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 CDA09_12265 e3b959682bfb73e64d70d170bbe0501d 214 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 182 194 5.9E-14 T 01-11-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 CDA09_12265 e3b959682bfb73e64d70d170bbe0501d 214 Pfam PF00196 Bacterial regulatory proteins, luxR family 151 206 2.6E-17 T 01-11-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 CDA09_12265 e3b959682bfb73e64d70d170bbe0501d 214 SMART SM00421 149 206 4.7E-20 T 01-11-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 CDA09_12265 e3b959682bfb73e64d70d170bbe0501d 214 Gene3D G3DSA:3.40.50.12740 11 212 3.1E-66 T 01-11-2018 CDA09_12265 e3b959682bfb73e64d70d170bbe0501d 214 SMART SM00448 11 124 3.7E-28 T 01-11-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 CDA09_12265 e3b959682bfb73e64d70d170bbe0501d 214 ProSitePatterns PS00622 LuxR-type HTH domain signature. 166 193 - T 01-11-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 CDA09_12265 e3b959682bfb73e64d70d170bbe0501d 214 SUPERFAMILY SSF46894 143 212 1.46E-21 T 01-11-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 CDA09_01490 f053c8a5e01c99b5a02cc6d29c84acf7 529 Gene3D G3DSA:1.25.40.10 362 522 2.7E-21 T 01-11-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 CDA09_01490 f053c8a5e01c99b5a02cc6d29c84acf7 529 SMART SM00028 416 457 43.0 T 01-11-2018 IPR019734 Tetratricopeptide repeat GO:0005515 CDA09_01490 f053c8a5e01c99b5a02cc6d29c84acf7 529 SMART SM00028 492 525 66.0 T 01-11-2018 IPR019734 Tetratricopeptide repeat GO:0005515 CDA09_01490 f053c8a5e01c99b5a02cc6d29c84acf7 529 SMART SM00028 458 491 18.0 T 01-11-2018 IPR019734 Tetratricopeptide repeat GO:0005515 CDA09_01490 f053c8a5e01c99b5a02cc6d29c84acf7 529 SUPERFAMILY SSF48452 403 522 2.09E-19 T 01-11-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 CDA09_16390 7e9b932f7c06a77cdf4713403cdb178f 240 SUPERFAMILY SSF56300 1 221 2.85E-27 T 01-11-2018 CDA09_16390 7e9b932f7c06a77cdf4713403cdb178f 240 Hamap MF_00575 UDP-2,3-diacylglucosamine hydrolase [lpxH]. 1 240 104.088 T 01-11-2018 IPR010138 UDP-2,3-diacylglucosamine hydrolase GO:0005737|GO:0009245|GO:0016462 KEGG: 00540+3.6.1.54 CDA09_16390 7e9b932f7c06a77cdf4713403cdb178f 240 TIGRFAM TIGR01854 lipid_A_lpxH: UDP-2,3-diacylglucosamine diphosphatase 3 228 4.0E-81 T 01-11-2018 IPR010138 UDP-2,3-diacylglucosamine hydrolase GO:0005737|GO:0009245|GO:0016462 KEGG: 00540+3.6.1.54 CDA09_16390 7e9b932f7c06a77cdf4713403cdb178f 240 Pfam PF12850 Calcineurin-like phosphoesterase superfamily domain 1 202 6.0E-8 T 01-11-2018 IPR024654 Calcineurin-like phosphoesterase domain, lpxH type Reactome: R-HSA-3238698 CDA09_16520 0d4cc5307b313674233f930caca3fbb8 283 SUPERFAMILY SSF51735 2 185 4.31E-58 T 01-11-2018 IPR036291 NAD(P)-binding domain superfamily CDA09_16520 0d4cc5307b313674233f930caca3fbb8 283 PIRSF PIRSF000105 1 283 5.0E-87 T 01-11-2018 IPR022694 3-hydroxyacyl-CoA dehydrogenase GO:0003857|GO:0006631|GO:0055114|GO:0070403 CDA09_16520 0d4cc5307b313674233f930caca3fbb8 283 Pfam PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain 186 282 3.4E-35 T 01-11-2018 IPR006108 3-hydroxyacyl-CoA dehydrogenase, C-terminal GO:0003857|GO:0006631|GO:0016491|GO:0055114 KEGG: 00062+4.2.1.17+1.1.1.35|KEGG: 00071+4.2.1.17+1.1.1.35|KEGG: 00120+1.1.1.35|KEGG: 00280+4.2.1.17+1.1.1.35|KEGG: 00281+4.2.1.17+1.1.1.35|KEGG: 00310+4.2.1.17+1.1.1.35|KEGG: 00360+4.2.1.17|KEGG: 00362+4.2.1.17+1.1.1.35|KEGG: 00380+4.2.1.17+1.1.1.35|KEGG: 00410+4.2.1.17|KEGG: 00592+4.2.1.17|KEGG: 00623+1.1.1.35|KEGG: 00627+4.2.1.17|KEGG: 00640+4.2.1.17|KEGG: 00650+4.2.1.17+1.1.1.35|KEGG: 00720+4.2.1.17+1.1.1.35|KEGG: 00903+4.2.1.17|KEGG: 00930+4.2.1.17+1.1.1.35|MetaCyc: PWY-1361|MetaCyc: PWY-5109|MetaCyc: PWY-5136|MetaCyc: PWY-5138|MetaCyc: PWY-5177|MetaCyc: PWY-5789|MetaCyc: PWY-6435|MetaCyc: PWY-6583|MetaCyc: PWY-6863|MetaCyc: PWY-6883|MetaCyc: PWY-6944|MetaCyc: PWY-6945|MetaCyc: PWY-6946|MetaCyc: PWY-7007|MetaCyc: PWY-7046|MetaCyc: PWY-7094|MetaCyc: PWY-7216|MetaCyc: PWY-735|MetaCyc: PWY-7401|MetaCyc: PWY-7606|MetaCyc: PWY-7654|MetaCyc: PWY-7656|MetaCyc: PWY-7726|MetaCyc: PWY-7778|MetaCyc: PWY-7779 CDA09_16520 0d4cc5307b313674233f930caca3fbb8 283 SUPERFAMILY SSF48179 185 282 5.87E-33 T 01-11-2018 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily GO:0055114 CDA09_16520 0d4cc5307b313674233f930caca3fbb8 283 Pfam PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain 5 183 2.1E-65 T 01-11-2018 IPR006176 3-hydroxyacyl-CoA dehydrogenase, NAD binding GO:0003857|GO:0006631|GO:0016491|GO:0055114 KEGG: 00062+4.2.1.17+1.1.1.35|KEGG: 00071+4.2.1.17+1.1.1.35|KEGG: 00120+1.1.1.35|KEGG: 00280+4.2.1.17+1.1.1.35|KEGG: 00281+4.2.1.17+1.1.1.35|KEGG: 00310+4.2.1.17+1.1.1.35|KEGG: 00360+4.2.1.17|KEGG: 00362+4.2.1.17+1.1.1.35|KEGG: 00380+4.2.1.17+1.1.1.35|KEGG: 00410+4.2.1.17|KEGG: 00592+4.2.1.17|KEGG: 00623+1.1.1.35|KEGG: 00627+4.2.1.17|KEGG: 00640+4.2.1.17|KEGG: 00650+4.2.1.17+1.1.1.35|KEGG: 00720+4.2.1.17+1.1.1.35|KEGG: 00903+4.2.1.17|KEGG: 00930+4.2.1.17+1.1.1.35|MetaCyc: PWY-1361|MetaCyc: PWY-5109|MetaCyc: PWY-5136|MetaCyc: PWY-5138|MetaCyc: PWY-5177|MetaCyc: PWY-5789|MetaCyc: PWY-6435|MetaCyc: PWY-6583|MetaCyc: PWY-6863|MetaCyc: PWY-6883|MetaCyc: PWY-6944|MetaCyc: PWY-6945|MetaCyc: PWY-6946|MetaCyc: PWY-7007|MetaCyc: PWY-7046|MetaCyc: PWY-7094|MetaCyc: PWY-7216|MetaCyc: PWY-735|MetaCyc: PWY-7401|MetaCyc: PWY-7606|MetaCyc: PWY-7654|MetaCyc: PWY-7656|MetaCyc: PWY-7726|MetaCyc: PWY-7778|MetaCyc: PWY-7779 CDA09_16520 0d4cc5307b313674233f930caca3fbb8 283 Gene3D G3DSA:3.40.50.720 1 189 3.6E-72 T 01-11-2018 CDA09_16520 0d4cc5307b313674233f930caca3fbb8 283 Gene3D G3DSA:1.10.1040.50 190 283 8.6E-34 T 01-11-2018 CDA09_04380 2fc88110574c5f3e83a564f8959659b8 960 SUPERFAMILY SSF52172 692 814 7.83E-40 T 01-11-2018 IPR011006 CheY-like superfamily CDA09_04380 2fc88110574c5f3e83a564f8959659b8 960 Gene3D G3DSA:3.30.565.10 365 530 1.9E-46 T 01-11-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily CDA09_04380 2fc88110574c5f3e83a564f8959659b8 960 Gene3D G3DSA:1.20.120.160 847 950 3.2E-17 T 01-11-2018 IPR036641 HPT domain superfamily GO:0000160 CDA09_04380 2fc88110574c5f3e83a564f8959659b8 960 SUPERFAMILY SSF55874 355 524 1.17E-39 T 01-11-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily CDA09_04380 2fc88110574c5f3e83a564f8959659b8 960 Pfam PF01627 Hpt domain 862 946 1.7E-8 T 01-11-2018 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160 CDA09_04380 2fc88110574c5f3e83a564f8959659b8 960 SMART SM00388 301 366 2.1E-24 T 01-11-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 CDA09_04380 2fc88110574c5f3e83a564f8959659b8 960 Gene3D G3DSA:1.10.287.130 281 364 1.3E-28 T 01-11-2018 CDA09_04380 2fc88110574c5f3e83a564f8959659b8 960 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 413 527 2.5E-27 T 01-11-2018 IPR003594 Histidine kinase/HSP90-like ATPase CDA09_04380 2fc88110574c5f3e83a564f8959659b8 960 SUPERFAMILY SSF47384 288 367 5.3E-22 T 01-11-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 CDA09_04380 2fc88110574c5f3e83a564f8959659b8 960 SMART SM00448 546 664 3.8E-22 T 01-11-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 CDA09_04380 2fc88110574c5f3e83a564f8959659b8 960 SMART SM00448 694 807 8.8E-38 T 01-11-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 CDA09_04380 2fc88110574c5f3e83a564f8959659b8 960 SUPERFAMILY SSF55785 31 138 3.22E-14 T 01-11-2018 IPR035965 PAS domain superfamily CDA09_04380 2fc88110574c5f3e83a564f8959659b8 960 SUPERFAMILY SSF52172 544 673 8.82E-27 T 01-11-2018 IPR011006 CheY-like superfamily CDA09_04380 2fc88110574c5f3e83a564f8959659b8 960 Pfam PF00072 Response regulator receiver domain 697 807 2.1E-27 T 01-11-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 CDA09_04380 2fc88110574c5f3e83a564f8959659b8 960 Pfam PF00072 Response regulator receiver domain 549 662 3.5E-16 T 01-11-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 CDA09_04380 2fc88110574c5f3e83a564f8959659b8 960 PRINTS PR00344 Bacterial sensor protein C-terminal signature 489 507 4.3E-13 T 01-11-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 CDA09_04380 2fc88110574c5f3e83a564f8959659b8 960 PRINTS PR00344 Bacterial sensor protein C-terminal signature 513 526 4.3E-13 T 01-11-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 CDA09_04380 2fc88110574c5f3e83a564f8959659b8 960 PRINTS PR00344 Bacterial sensor protein C-terminal signature 454 468 4.3E-13 T 01-11-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 CDA09_04380 2fc88110574c5f3e83a564f8959659b8 960 PRINTS PR00344 Bacterial sensor protein C-terminal signature 472 482 4.3E-13 T 01-11-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 CDA09_04380 2fc88110574c5f3e83a564f8959659b8 960 SMART SM00086 91 131 9.0E-4 T 01-11-2018 IPR001610 PAC motif CDA09_04380 2fc88110574c5f3e83a564f8959659b8 960 SMART SM00086 240 281 0.0014 T 01-11-2018 IPR001610 PAC motif CDA09_04380 2fc88110574c5f3e83a564f8959659b8 960 SUPERFAMILY SSF47226 790 925 1.83E-19 T 01-11-2018 IPR036641 HPT domain superfamily GO:0000160 CDA09_04380 2fc88110574c5f3e83a564f8959659b8 960 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 171 285 2.6E-7 T 01-11-2018 IPR000014 PAS domain CDA09_04380 2fc88110574c5f3e83a564f8959659b8 960 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 12 138 1.1E-10 T 01-11-2018 IPR000014 PAS domain CDA09_04380 2fc88110574c5f3e83a564f8959659b8 960 Pfam PF00512 His Kinase A (phospho-acceptor) domain 302 366 5.9E-20 T 01-11-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 CDA09_04380 2fc88110574c5f3e83a564f8959659b8 960 SUPERFAMILY SSF55785 156 279 1.08E-14 T 01-11-2018 IPR035965 PAS domain superfamily CDA09_04380 2fc88110574c5f3e83a564f8959659b8 960 Gene3D G3DSA:3.30.450.20 167 280 3.6E-23 T 01-11-2018 CDA09_04380 2fc88110574c5f3e83a564f8959659b8 960 SMART SM00091 14 80 0.016 T 01-11-2018 IPR000014 PAS domain CDA09_04380 2fc88110574c5f3e83a564f8959659b8 960 SMART SM00091 168 238 36.0 T 01-11-2018 IPR000014 PAS domain CDA09_04380 2fc88110574c5f3e83a564f8959659b8 960 Gene3D G3DSA:3.30.450.20 11 147 5.1E-17 T 01-11-2018 CDA09_04380 2fc88110574c5f3e83a564f8959659b8 960 Pfam PF13426 PAS domain 26 130 2.3E-7 T 01-11-2018 IPR000014 PAS domain CDA09_04380 2fc88110574c5f3e83a564f8959659b8 960 Pfam PF13426 PAS domain 181 279 1.7E-4 T 01-11-2018 IPR000014 PAS domain CDA09_04380 2fc88110574c5f3e83a564f8959659b8 960 SMART SM00387 413 529 7.6E-35 T 01-11-2018 IPR003594 Histidine kinase/HSP90-like ATPase CDA09_04380 2fc88110574c5f3e83a564f8959659b8 960 Gene3D G3DSA:3.40.50.12740 546 693 2.1E-26 T 01-11-2018 CDA09_04380 2fc88110574c5f3e83a564f8959659b8 960 Gene3D G3DSA:3.40.50.12740 694 846 1.0E-46 T 01-11-2018 CDA09_20940 d8353c8e6f3c9a01af9094c5375a302c 1295 Pfam PF11880 Domain of unknown function (DUF3400) 1251 1295 1.3E-22 T 01-11-2018 IPR021817 Protein of unknown function DUF3400 CDA09_20940 d8353c8e6f3c9a01af9094c5375a302c 1295 SUPERFAMILY SSF55103 410 791 5.89E-38 T 01-11-2018 IPR016164 FAD-linked oxidase-like, C-terminal GO:0003824|GO:0050660 CDA09_20940 d8353c8e6f3c9a01af9094c5375a302c 1295 Pfam PF02754 Cysteine-rich domain 1163 1247 0.018 T 01-11-2018 IPR004017 Cysteine-rich domain CDA09_20940 d8353c8e6f3c9a01af9094c5375a302c 1295 Pfam PF02754 Cysteine-rich domain 1037 1126 1.1E-6 T 01-11-2018 IPR004017 Cysteine-rich domain CDA09_20940 d8353c8e6f3c9a01af9094c5375a302c 1295 Pfam PF02913 FAD linked oxidases, C-terminal domain 689 789 9.5E-18 T 01-11-2018 IPR004113 FAD-linked oxidase, C-terminal GO:0003824|GO:0050660 CDA09_20940 d8353c8e6f3c9a01af9094c5375a302c 1295 Pfam PF02913 FAD linked oxidases, C-terminal domain 443 558 2.2E-4 T 01-11-2018 IPR004113 FAD-linked oxidase, C-terminal GO:0003824|GO:0050660 CDA09_20940 d8353c8e6f3c9a01af9094c5375a302c 1295 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 890 901 - T 01-11-2018 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site CDA09_20940 d8353c8e6f3c9a01af9094c5375a302c 1295 Pfam PF13183 4Fe-4S dicluster domain 825 904 4.3E-7 T 01-11-2018 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain CDA09_20940 d8353c8e6f3c9a01af9094c5375a302c 1295 Pfam PF01565 FAD binding domain 173 322 2.2E-23 T 01-11-2018 IPR006094 FAD linked oxidase, N-terminal GO:0016491|GO:0050660|GO:0055114 CDA09_20940 d8353c8e6f3c9a01af9094c5375a302c 1295 SUPERFAMILY SSF46548 800 921 2.09E-14 T 01-11-2018 IPR009051 Alpha-helical ferredoxin GO:0051536 CDA09_20940 d8353c8e6f3c9a01af9094c5375a302c 1295 SUPERFAMILY SSF56176 135 405 4.25E-54 T 01-11-2018 IPR036318 FAD-binding, type PCMH-like superfamily GO:0050660 CDA09_20940 d8353c8e6f3c9a01af9094c5375a302c 1295 Gene3D G3DSA:3.30.70.2740 681 753 2.1E-6 T 01-11-2018 CDA09_20940 d8353c8e6f3c9a01af9094c5375a302c 1295 Gene3D G3DSA:3.30.465.40 133 335 1.3E-31 T 01-11-2018 CDA09_20940 d8353c8e6f3c9a01af9094c5375a302c 1295 Pfam PF12447 Protein of unknown function (DUF3683) 3 123 4.1E-51 T 01-11-2018 IPR022153 Protein of unknown function DUF3683 CDA09_20940 d8353c8e6f3c9a01af9094c5375a302c 1295 Gene3D G3DSA:1.10.1060.10 805 922 9.5E-6 T 01-11-2018 IPR009051 Alpha-helical ferredoxin GO:0051536 CDA09_13655 bcc537a91818673c74e0ceb3f25ab47a 464 ProSitePatterns PS00570 Bacterial ring hydroxylating dioxygenases alpha-subunit signature. 91 114 - T 01-11-2018 IPR015881 Aromatic-ring-hydroxylating dioxygenase, 2Fe-2S-binding site GO:0005506|GO:0051537|GO:0055114 CDA09_13655 bcc537a91818673c74e0ceb3f25ab47a 464 SUPERFAMILY SSF50022 19 163 1.2E-40 T 01-11-2018 IPR036922 Rieske [2Fe-2S] iron-sulphur domain superfamily GO:0016491|GO:0051537|GO:0055114 CDA09_13655 bcc537a91818673c74e0ceb3f25ab47a 464 PRINTS PR00090 Ring hydroxylating dioxygenase alpha-subunit signature 190 212 4.2E-46 T 01-11-2018 IPR001663 Aromatic-ring-hydroxylating dioxygenase, alpha subunit GO:0044237|GO:0051537|GO:0055114 CDA09_13655 bcc537a91818673c74e0ceb3f25ab47a 464 PRINTS PR00090 Ring hydroxylating dioxygenase alpha-subunit signature 63 78 4.2E-46 T 01-11-2018 IPR001663 Aromatic-ring-hydroxylating dioxygenase, alpha subunit GO:0044237|GO:0051537|GO:0055114 CDA09_13655 bcc537a91818673c74e0ceb3f25ab47a 464 PRINTS PR00090 Ring hydroxylating dioxygenase alpha-subunit signature 84 104 4.2E-46 T 01-11-2018 IPR001663 Aromatic-ring-hydroxylating dioxygenase, alpha subunit GO:0044237|GO:0051537|GO:0055114 CDA09_13655 bcc537a91818673c74e0ceb3f25ab47a 464 PRINTS PR00090 Ring hydroxylating dioxygenase alpha-subunit signature 105 125 4.2E-46 T 01-11-2018 IPR001663 Aromatic-ring-hydroxylating dioxygenase, alpha subunit GO:0044237|GO:0051537|GO:0055114 CDA09_13655 bcc537a91818673c74e0ceb3f25ab47a 464 PRINTS PR00090 Ring hydroxylating dioxygenase alpha-subunit signature 149 175 4.2E-46 T 01-11-2018 IPR001663 Aromatic-ring-hydroxylating dioxygenase, alpha subunit GO:0044237|GO:0051537|GO:0055114 CDA09_13655 bcc537a91818673c74e0ceb3f25ab47a 464 PRINTS PR00090 Ring hydroxylating dioxygenase alpha-subunit signature 33 58 4.2E-46 T 01-11-2018 IPR001663 Aromatic-ring-hydroxylating dioxygenase, alpha subunit GO:0044237|GO:0051537|GO:0055114 CDA09_13655 bcc537a91818673c74e0ceb3f25ab47a 464 Gene3D G3DSA:2.102.10.10 48 173 1.0E-133 T 01-11-2018 IPR036922 Rieske [2Fe-2S] iron-sulphur domain superfamily GO:0016491|GO:0051537|GO:0055114 CDA09_13655 bcc537a91818673c74e0ceb3f25ab47a 464 SUPERFAMILY SSF55961 166 462 9.42E-60 T 01-11-2018 CDA09_13655 bcc537a91818673c74e0ceb3f25ab47a 464 Gene3D G3DSA:3.90.380.10 31 460 1.0E-133 T 01-11-2018 CDA09_13655 bcc537a91818673c74e0ceb3f25ab47a 464 Pfam PF00848 Ring hydroxylating alpha subunit (catalytic domain) 169 411 3.5E-13 T 01-11-2018 IPR015879 Aromatic-ring-hydroxylating dioxygenase, alpha subunit, C-terminal domain GO:0005506|GO:0044237|GO:0051537|GO:0055114 CDA09_13655 bcc537a91818673c74e0ceb3f25ab47a 464 Pfam PF00355 Rieske [2Fe-2S] domain 48 132 1.7E-17 T 01-11-2018 IPR017941 Rieske [2Fe-2S] iron-sulphur domain GO:0016491|GO:0051537|GO:0055114 CDA09_15185 526eefbfa800a562702b19af862192dd 603 TIGRFAM TIGR00194 uvrC: excinuclease ABC subunit C 12 583 2.8E-175 T 01-11-2018 IPR004791 UvrABC system, subunit C GO:0006289|GO:0009380|GO:0009381 CDA09_15185 526eefbfa800a562702b19af862192dd 603 SMART SM00278 582 601 0.033 T 01-11-2018 IPR003583 Helix-hairpin-helix DNA-binding motif, class 1 GO:0003677|GO:0006281 CDA09_15185 526eefbfa800a562702b19af862192dd 603 SMART SM00278 550 569 11.0 T 01-11-2018 IPR003583 Helix-hairpin-helix DNA-binding motif, class 1 GO:0003677|GO:0006281 CDA09_15185 526eefbfa800a562702b19af862192dd 603 Gene3D G3DSA:3.30.420.340 374 546 4.9E-54 T 01-11-2018 IPR038476 UvrC homology region 2 superfamily CDA09_15185 526eefbfa800a562702b19af862192dd 603 SUPERFAMILY SSF46600 194 245 1.96E-12 T 01-11-2018 IPR036876 UVR domain superfamily CDA09_15185 526eefbfa800a562702b19af862192dd 603 Pfam PF12826 Helix-hairpin-helix motif 555 602 4.0E-7 T 01-11-2018 CDA09_15185 526eefbfa800a562702b19af862192dd 603 SUPERFAMILY SSF47781 500 603 4.77E-24 T 01-11-2018 IPR010994 RuvA domain 2-like CDA09_15185 526eefbfa800a562702b19af862192dd 603 Pfam PF08459 UvrC Helix-hairpin-helix N-terminal 381 536 1.8E-52 T 01-11-2018 IPR001162 UvrC family homology region CDA09_15185 526eefbfa800a562702b19af862192dd 603 Gene3D G3DSA:1.10.150.20 549 603 7.0E-21 T 01-11-2018 CDA09_15185 526eefbfa800a562702b19af862192dd 603 SUPERFAMILY SSF82771 21 103 1.1E-21 T 01-11-2018 IPR035901 GIY-YIG endonuclease superfamily Reactome: R-HSA-5693568|Reactome: R-HSA-6783310 CDA09_15185 526eefbfa800a562702b19af862192dd 603 SMART SM00465 20 101 3.3E-19 T 01-11-2018 IPR000305 GIY-YIG endonuclease CDA09_15185 526eefbfa800a562702b19af862192dd 603 Pfam PF01541 GIY-YIG catalytic domain 21 96 2.8E-8 T 01-11-2018 IPR000305 GIY-YIG endonuclease CDA09_15185 526eefbfa800a562702b19af862192dd 603 Pfam PF02151 UvrB/uvrC motif 207 240 4.2E-9 T 01-11-2018 IPR001943 UVR domain GO:0005515 CDA09_15185 526eefbfa800a562702b19af862192dd 603 Hamap MF_00203 UvrABC system protein C [uvrC]. 7 601 27.613 T 01-11-2018 IPR004791 UvrABC system, subunit C GO:0006289|GO:0009380|GO:0009381 CDA09_15185 526eefbfa800a562702b19af862192dd 603 Gene3D G3DSA:3.40.1440.10 9 105 6.0E-33 T 01-11-2018 IPR035901 GIY-YIG endonuclease superfamily Reactome: R-HSA-5693568|Reactome: R-HSA-6783310 CDA09_02190 7b1b95cc9870ea0cecf05e165123efc5 389 Gene3D G3DSA:3.20.20.80 14 281 1.3E-28 T 01-11-2018 CDA09_02190 7b1b95cc9870ea0cecf05e165123efc5 389 Pfam PF02836 Glycosyl hydrolases family 2, TIM barrel domain 49 158 7.0E-5 T 01-11-2018 IPR006103 Glycoside hydrolase family 2, catalytic domain GO:0004553|GO:0005975 KEGG: 00052+3.2.1.23|KEGG: 00511+3.2.1.23|KEGG: 00531+3.2.1.23|KEGG: 00600+3.2.1.23|KEGG: 00604+3.2.1.23|MetaCyc: PWY-6807|Reactome: R-HSA-6798695 CDA09_02190 7b1b95cc9870ea0cecf05e165123efc5 389 SUPERFAMILY SSF51445 22 276 5.09E-35 T 01-11-2018 IPR017853 Glycoside hydrolase superfamily CDA09_08865 dbaadfe6b565e174d983b5e757e665f7 621 SUPERFAMILY SSF53300 432 615 1.15E-18 T 01-11-2018 IPR036465 von Willebrand factor A-like domain superfamily CDA09_08865 dbaadfe6b565e174d983b5e757e665f7 621 Gene3D G3DSA:3.40.50.410 425 605 3.1E-14 T 01-11-2018 IPR036465 von Willebrand factor A-like domain superfamily CDA09_08865 dbaadfe6b565e174d983b5e757e665f7 621 SMART SM00327 430 620 1.1E-16 T 01-11-2018 IPR002035 von Willebrand factor, type A CDA09_08865 dbaadfe6b565e174d983b5e757e665f7 621 Pfam PF00092 von Willebrand factor type A domain 463 583 3.5E-6 T 01-11-2018 IPR002035 von Willebrand factor, type A CDA09_22020 71cbfebd745def7cf7da6ca7cdd92053 452 Pfam PF05598 Transposase domain (DUF772) 52 121 7.5E-16 T 01-11-2018 IPR008490 Transposase InsH, N-terminal CDA09_22020 71cbfebd745def7cf7da6ca7cdd92053 452 Pfam PF13751 Transposase DDE domain 381 446 1.7E-15 T 01-11-2018 IPR025668 Transposase DDE domain CDA09_08810 71cbfebd745def7cf7da6ca7cdd92053 452 Pfam PF05598 Transposase domain (DUF772) 52 121 7.5E-16 T 01-11-2018 IPR008490 Transposase InsH, N-terminal CDA09_08810 71cbfebd745def7cf7da6ca7cdd92053 452 Pfam PF13751 Transposase DDE domain 381 446 1.7E-15 T 01-11-2018 IPR025668 Transposase DDE domain CDA09_21390 71cbfebd745def7cf7da6ca7cdd92053 452 Pfam PF05598 Transposase domain (DUF772) 52 121 7.5E-16 T 01-11-2018 IPR008490 Transposase InsH, N-terminal CDA09_21390 71cbfebd745def7cf7da6ca7cdd92053 452 Pfam PF13751 Transposase DDE domain 381 446 1.7E-15 T 01-11-2018 IPR025668 Transposase DDE domain CDA09_09660 e6a593a07931e7fe4e0f31622e8b9a8b 384 ProSitePatterns PS00737 Thiolases signature 2. 329 345 - T 01-11-2018 IPR020613 Thiolase, conserved site GO:0016747 CDA09_09660 e6a593a07931e7fe4e0f31622e8b9a8b 384 Gene3D G3DSA:3.40.47.10 127 380 5.1E-128 T 01-11-2018 IPR016039 Thiolase-like GO:0003824 CDA09_09660 e6a593a07931e7fe4e0f31622e8b9a8b 384 TIGRFAM TIGR01930 AcCoA-C-Actrans: acetyl-CoA C-acyltransferase 6 381 2.3E-116 T 01-11-2018 IPR002155 Thiolase GO:0016747 CDA09_09660 e6a593a07931e7fe4e0f31622e8b9a8b 384 Gene3D G3DSA:3.40.47.10 6 266 5.1E-128 T 01-11-2018 IPR016039 Thiolase-like GO:0003824 CDA09_09660 e6a593a07931e7fe4e0f31622e8b9a8b 384 PIRSF PIRSF000429 1 384 1.4E-109 T 01-11-2018 IPR002155 Thiolase GO:0016747 CDA09_09660 e6a593a07931e7fe4e0f31622e8b9a8b 384 Pfam PF00108 Thiolase, N-terminal domain 5 252 8.3E-51 T 01-11-2018 IPR020616 Thiolase, N-terminal GO:0016747 CDA09_09660 e6a593a07931e7fe4e0f31622e8b9a8b 384 Pfam PF02803 Thiolase, C-terminal domain 261 381 2.8E-41 T 01-11-2018 IPR020617 Thiolase, C-terminal GO:0016747 CDA09_09660 e6a593a07931e7fe4e0f31622e8b9a8b 384 SUPERFAMILY SSF53901 3 260 3.29E-63 T 01-11-2018 IPR016039 Thiolase-like GO:0003824 CDA09_09660 e6a593a07931e7fe4e0f31622e8b9a8b 384 SUPERFAMILY SSF53901 261 382 2.84E-41 T 01-11-2018 IPR016039 Thiolase-like GO:0003824 CDA09_21595 963f654085303f5e1d45a057d920ef6d 208 Pfam PF00440 Bacterial regulatory proteins, tetR family 18 62 3.5E-15 T 01-11-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 CDA09_21595 963f654085303f5e1d45a057d920ef6d 208 ProSitePatterns PS01081 TetR-type HTH domain signature. 30 60 - T 01-11-2018 IPR023772 DNA-binding HTH domain, TetR-type, conserved site CDA09_21595 963f654085303f5e1d45a057d920ef6d 208 Gene3D G3DSA:1.10.357.10 9 206 6.9E-38 T 01-11-2018 CDA09_21595 963f654085303f5e1d45a057d920ef6d 208 SUPERFAMILY SSF46689 6 90 9.48E-21 T 01-11-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 CDA09_21595 963f654085303f5e1d45a057d920ef6d 208 SUPERFAMILY SSF48498 89 197 1.54E-8 T 01-11-2018 IPR036271 Tetracyclin repressor-like, C-terminal domain superfamily CDA09_21595 963f654085303f5e1d45a057d920ef6d 208 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 18 31 4.5E-9 T 01-11-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 CDA09_21595 963f654085303f5e1d45a057d920ef6d 208 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 39 62 4.5E-9 T 01-11-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 CDA09_03055 8cb7bcca613794c0194e5e0f01ff389a 369 Pfam PF01728 FtsJ-like methyltransferase 197 271 2.5E-8 T 01-11-2018 IPR002877 Ribosomal RNA methyltransferase FtsJ domain GO:0008168|GO:0032259 CDA09_03055 8cb7bcca613794c0194e5e0f01ff389a 369 Gene3D G3DSA:3.30.2300.20 92 186 2.9E-26 T 01-11-2018 CDA09_03055 8cb7bcca613794c0194e5e0f01ff389a 369 Gene3D G3DSA:3.30.70.2810 13 89 3.8E-21 T 01-11-2018 CDA09_03055 8cb7bcca613794c0194e5e0f01ff389a 369 Hamap MF_01551 Ribosomal RNA large subunit methyltransferase M [rlmM]. 13 364 72.896 T 01-11-2018 IPR011224 Ribosomal RNA large subunit methyltransferase M GO:0008168 CDA09_03055 8cb7bcca613794c0194e5e0f01ff389a 369 Gene3D G3DSA:3.40.50.150 187 364 1.2E-51 T 01-11-2018 CDA09_03055 8cb7bcca613794c0194e5e0f01ff389a 369 PIRSF PIRSF028774 13 368 1.6E-127 T 01-11-2018 IPR011224 Ribosomal RNA large subunit methyltransferase M GO:0008168 CDA09_03055 8cb7bcca613794c0194e5e0f01ff389a 369 SUPERFAMILY SSF53335 197 295 6.69E-15 T 01-11-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase CDA09_06920 da6c46490963446e4530016679e728a3 900 Gene3D G3DSA:3.30.450.20 283 407 2.2E-24 T 01-11-2018 CDA09_06920 da6c46490963446e4530016679e728a3 900 SMART SM00388 668 738 2.5E-5 T 01-11-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 CDA09_06920 da6c46490963446e4530016679e728a3 900 Pfam PF13188 PAS domain 534 586 2.7E-5 T 01-11-2018 IPR000014 PAS domain CDA09_06920 da6c46490963446e4530016679e728a3 900 SUPERFAMILY SSF55874 728 889 8.25E-36 T 01-11-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily CDA09_06920 da6c46490963446e4530016679e728a3 900 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 781 890 1.4E-18 T 01-11-2018 IPR003594 Histidine kinase/HSP90-like ATPase CDA09_06920 da6c46490963446e4530016679e728a3 900 Pfam PF13426 PAS domain 423 521 1.2E-10 T 01-11-2018 IPR000014 PAS domain CDA09_06920 da6c46490963446e4530016679e728a3 900 SUPERFAMILY SSF55785 519 644 1.73E-11 T 01-11-2018 IPR035965 PAS domain superfamily CDA09_06920 da6c46490963446e4530016679e728a3 900 Gene3D G3DSA:1.10.287.130 673 735 9.7E-19 T 01-11-2018 CDA09_06920 da6c46490963446e4530016679e728a3 900 SMART SM00091 534 598 31.0 T 01-11-2018 IPR000014 PAS domain CDA09_06920 da6c46490963446e4530016679e728a3 900 SMART SM00091 406 473 1.1E-5 T 01-11-2018 IPR000014 PAS domain CDA09_06920 da6c46490963446e4530016679e728a3 900 SMART SM00091 285 351 1.0E-10 T 01-11-2018 IPR000014 PAS domain CDA09_06920 da6c46490963446e4530016679e728a3 900 Gene3D G3DSA:3.30.450.20 532 659 8.7E-11 T 01-11-2018 CDA09_06920 da6c46490963446e4530016679e728a3 900 SUPERFAMILY SSF55785 391 520 1.93E-24 T 01-11-2018 IPR035965 PAS domain superfamily CDA09_06920 da6c46490963446e4530016679e728a3 900 Gene3D G3DSA:3.30.565.10 737 895 4.1E-37 T 01-11-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily CDA09_06920 da6c46490963446e4530016679e728a3 900 SMART SM00387 780 891 6.4E-30 T 01-11-2018 IPR003594 Histidine kinase/HSP90-like ATPase CDA09_06920 da6c46490963446e4530016679e728a3 900 SMART SM00086 606 646 77.0 T 01-11-2018 IPR001610 PAC motif CDA09_06920 da6c46490963446e4530016679e728a3 900 SMART SM00086 356 394 5.1E-5 T 01-11-2018 IPR001610 PAC motif CDA09_06920 da6c46490963446e4530016679e728a3 900 SMART SM00086 480 522 6.4E-5 T 01-11-2018 IPR001610 PAC motif CDA09_06920 da6c46490963446e4530016679e728a3 900 Gene3D G3DSA:3.30.450.20 408 531 2.9E-22 T 01-11-2018 CDA09_06920 da6c46490963446e4530016679e728a3 900 Pfam PF00512 His Kinase A (phospho-acceptor) domain 669 735 6.2E-7 T 01-11-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 CDA09_06920 da6c46490963446e4530016679e728a3 900 SUPERFAMILY SSF47384 655 735 2.55E-7 T 01-11-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 CDA09_06920 da6c46490963446e4530016679e728a3 900 PRINTS PR00344 Bacterial sensor protein C-terminal signature 822 836 1.9E-14 T 01-11-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 CDA09_06920 da6c46490963446e4530016679e728a3 900 PRINTS PR00344 Bacterial sensor protein C-terminal signature 875 888 1.9E-14 T 01-11-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 CDA09_06920 da6c46490963446e4530016679e728a3 900 PRINTS PR00344 Bacterial sensor protein C-terminal signature 851 869 1.9E-14 T 01-11-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 CDA09_06920 da6c46490963446e4530016679e728a3 900 PRINTS PR00344 Bacterial sensor protein C-terminal signature 840 850 1.9E-14 T 01-11-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 CDA09_06920 da6c46490963446e4530016679e728a3 900 SUPERFAMILY SSF55785 290 395 1.21E-24 T 01-11-2018 IPR035965 PAS domain superfamily CDA09_06920 da6c46490963446e4530016679e728a3 900 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 404 529 1.6E-22 T 01-11-2018 IPR000014 PAS domain CDA09_06920 da6c46490963446e4530016679e728a3 900 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 284 401 5.7E-20 T 01-11-2018 IPR000014 PAS domain CDA09_06920 da6c46490963446e4530016679e728a3 900 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 533 651 9.5E-7 T 01-11-2018 IPR000014 PAS domain CDA09_06920 da6c46490963446e4530016679e728a3 900 Pfam PF08447 PAS fold 310 381 1.4E-14 T 01-11-2018 IPR013655 PAS fold-3 GO:0005515 CDA09_03770 1be749013910fbc3a6bcda5b0e6476cf 324 Pfam PF00107 Zinc-binding dehydrogenase 151 252 3.9E-29 T 01-11-2018 IPR013149 Alcohol dehydrogenase, C-terminal GO:0055114 CDA09_03770 1be749013910fbc3a6bcda5b0e6476cf 324 SUPERFAMILY SSF50129 3 144 2.36E-39 T 01-11-2018 IPR011032 GroES-like superfamily CDA09_03770 1be749013910fbc3a6bcda5b0e6476cf 324 ProSitePatterns PS01162 Quinone oxidoreductase / zeta-crystallin signature. 140 161 - T 01-11-2018 IPR002364 Quinone oxidoreductase/zeta-crystallin, conserved site GO:0008270|GO:0016491 CDA09_03770 1be749013910fbc3a6bcda5b0e6476cf 324 SUPERFAMILY SSF51735 111 263 7.57E-52 T 01-11-2018 IPR036291 NAD(P)-binding domain superfamily CDA09_03770 1be749013910fbc3a6bcda5b0e6476cf 324 SMART SM00829 11 322 3.9E-46 T 01-11-2018 IPR020843 Polyketide synthase, enoylreductase domain GO:0016491 CDA09_03770 1be749013910fbc3a6bcda5b0e6476cf 324 Gene3D G3DSA:3.40.50.720 123 268 4.2E-125 T 01-11-2018 CDA09_03770 1be749013910fbc3a6bcda5b0e6476cf 324 Pfam PF08240 Alcohol dehydrogenase GroES-like domain 29 86 6.9E-8 T 01-11-2018 IPR013154 Alcohol dehydrogenase, N-terminal GO:0055114 CDA09_03770 1be749013910fbc3a6bcda5b0e6476cf 324 Gene3D G3DSA:3.90.180.10 12 318 4.2E-125 T 01-11-2018 CDA09_16215 a338b238856c32d8222bf6b924e9edb0 417 Hamap MF_01358 NAD(P)H-quinone oxidoreductase subunit H, chloroplastic [ndhH]. 1 417 50.629 T 01-11-2018 IPR022885 NAD(P)H-quinone oxidoreductase subunit D/H GO:0016651|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 CDA09_16215 a338b238856c32d8222bf6b924e9edb0 417 Gene3D G3DSA:1.10.645.20 4 417 4.5E-176 T 01-11-2018 IPR038290 NADH-quinone oxidoreductase, subunit D superfamily Reactome: R-HSA-611105|Reactome: R-HSA-6799198 CDA09_16215 a338b238856c32d8222bf6b924e9edb0 417 ProSitePatterns PS00535 Respiratory chain NADH dehydrogenase 49 Kd subunit signature. 43 54 - T 01-11-2018 IPR014029 NADH:ubiquinone oxidoreductase, 49kDa subunit, conserved site GO:0016651|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 CDA09_16215 a338b238856c32d8222bf6b924e9edb0 417 SUPERFAMILY SSF56762 16 417 4.71E-139 T 01-11-2018 IPR029014 [NiFe]-hydrogenase, large subunit Reactome: R-HSA-611105|Reactome: R-HSA-6799198 CDA09_16215 a338b238856c32d8222bf6b924e9edb0 417 TIGRFAM TIGR01962 NuoD: NADH dehydrogenase (quinone), D subunit 6 417 1.5E-189 T 01-11-2018 IPR022885 NAD(P)H-quinone oxidoreductase subunit D/H GO:0016651|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 CDA09_16215 a338b238856c32d8222bf6b924e9edb0 417 Pfam PF00346 Respiratory-chain NADH dehydrogenase, 49 Kd subunit 120 417 2.0E-125 T 01-11-2018 IPR001135 NADH-quinone oxidoreductase, subunit D GO:0016651|GO:0048038|GO:0051287|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 CDA09_14740 e6a3e71b96b2281f92c917afa3671ae1 596 Pfam PF00005 ABC transporter 366 522 1.4E-27 T 01-11-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 CDA09_14740 e6a3e71b96b2281f92c917afa3671ae1 596 Pfam PF02653 Branched-chain amino acid transport system / permease component 26 305 2.0E-36 T 01-11-2018 IPR001851 ABC transporter, permease GO:0016020|GO:0022857|GO:0055085 CDA09_14740 e6a3e71b96b2281f92c917afa3671ae1 596 Gene3D G3DSA:3.40.50.300 345 594 4.5E-57 T 01-11-2018 CDA09_14740 e6a3e71b96b2281f92c917afa3671ae1 596 Pfam PF12399 Branched-chain amino acid ATP-binding cassette transporter 571 593 7.1E-11 T 01-11-2018 IPR032823 Branched-chain amino acid ATP-binding cassette transporter, C-terminal CDA09_14740 e6a3e71b96b2281f92c917afa3671ae1 596 SMART SM00382 373 579 6.7E-8 T 01-11-2018 IPR003593 AAA+ ATPase domain CDA09_14740 e6a3e71b96b2281f92c917afa3671ae1 596 SUPERFAMILY SSF52540 347 592 4.32E-60 T 01-11-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CDA09_06995 03d9a3995ab6938c1531c5f268f73aea 70 SUPERFAMILY SSF47598 4 58 6.52E-14 T 01-11-2018 IPR010985 Ribbon-helix-helix GO:0006355 CDA09_06995 03d9a3995ab6938c1531c5f268f73aea 70 Gene3D G3DSA:1.10.1220.10 12 57 6.6E-13 T 01-11-2018 IPR013321 Arc-type ribbon-helix-helix GO:0006355 CDA09_17195 2c1ebef8fbb67429abaffdc855a7316f 100 Pfam PF01381 Helix-turn-helix 9 46 4.3E-5 T 01-11-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 CDA09_17195 2c1ebef8fbb67429abaffdc855a7316f 100 SUPERFAMILY SSF47413 9 63 4.35E-8 T 01-11-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 CDA09_17195 2c1ebef8fbb67429abaffdc855a7316f 100 Gene3D G3DSA:1.10.260.40 2 65 3.9E-11 T 01-11-2018 CDA09_16570 90a6a9b63ce722f55b4fec4595a111e7 209 Pfam PF05233 PHB accumulation regulatory domain 124 161 4.7E-16 T 01-11-2018 IPR007897 PHB accumulation regulatory CDA09_16570 90a6a9b63ce722f55b4fec4595a111e7 209 Pfam PF05233 PHB accumulation regulatory domain 71 110 2.3E-17 T 01-11-2018 IPR007897 PHB accumulation regulatory CDA09_16570 90a6a9b63ce722f55b4fec4595a111e7 209 TIGRFAM TIGR01848 PHA_reg_PhaR: polyhydroxyalkanoate synthesis repressor PhaR 6 112 1.7E-43 T 01-11-2018 IPR010134 Polyhydroxyalkanoate synthesis repressor PhaR GO:0006355 CDA09_16570 90a6a9b63ce722f55b4fec4595a111e7 209 Pfam PF07879 PHB/PHA accumulation regulator DNA-binding domain 7 66 6.3E-31 T 01-11-2018 IPR012909 PHA accumulation regulator DNA-binding, N-terminal CDA09_05545 5e55a94b73742a539a29a1663d2fe03c 142 Gene3D G3DSA:3.90.1180.10 1 142 2.9E-61 T 01-11-2018 IPR036899 Ribosomal protein L13 superfamily GO:0003735|GO:0005840|GO:0006412 CDA09_05545 5e55a94b73742a539a29a1663d2fe03c 142 SUPERFAMILY SSF52161 1 140 1.57E-59 T 01-11-2018 IPR036899 Ribosomal protein L13 superfamily GO:0003735|GO:0005840|GO:0006412 CDA09_05545 5e55a94b73742a539a29a1663d2fe03c 142 Pfam PF00572 Ribosomal protein L13 15 138 2.6E-55 T 01-11-2018 IPR005822 Ribosomal protein L13 GO:0003735|GO:0005840|GO:0006412 CDA09_05545 5e55a94b73742a539a29a1663d2fe03c 142 TIGRFAM TIGR01066 rplM_bact: ribosomal protein uL13 5 141 1.1E-60 T 01-11-2018 IPR005823 Ribosomal protein L13, bacterial-type GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 CDA09_05545 5e55a94b73742a539a29a1663d2fe03c 142 PIRSF PIRSF002181 1 142 5.7E-47 T 01-11-2018 IPR005822 Ribosomal protein L13 GO:0003735|GO:0005840|GO:0006412 CDA09_05545 5e55a94b73742a539a29a1663d2fe03c 142 Hamap MF_01366 50S ribosomal protein L13 [rplM]. 15 141 28.169 T 01-11-2018 IPR005822 Ribosomal protein L13 GO:0003735|GO:0005840|GO:0006412 CDA09_19495 5fe5aa82783e3d6a5581b6228501a565 264 Gene3D G3DSA:3.30.300.20 17 107 1.4E-29 T 01-11-2018 IPR015946 K homology domain-like, alpha/beta CDA09_19495 5fe5aa82783e3d6a5581b6228501a565 264 SUPERFAMILY SSF54821 108 206 1.44E-39 T 01-11-2018 IPR036419 Ribosomal protein S3, C-terminal domain superfamily GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 CDA09_19495 5fe5aa82783e3d6a5581b6228501a565 264 SMART SM00322 60 125 1.4E-6 T 01-11-2018 IPR004087 K Homology domain GO:0003676 CDA09_19495 5fe5aa82783e3d6a5581b6228501a565 264 Hamap MF_01309_B 30S ribosomal protein S3 [rpsC]. 1 206 39.175 T 01-11-2018 IPR005704 Ribosomal protein S3, bacterial GO:0003735|GO:0006412|GO:0015935 CDA09_19495 5fe5aa82783e3d6a5581b6228501a565 264 Pfam PF07650 KH domain 38 110 1.0E-18 T 01-11-2018 IPR004044 K Homology domain, type 2 GO:0003723 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 CDA09_19495 5fe5aa82783e3d6a5581b6228501a565 264 Pfam PF00189 Ribosomal protein S3, C-terminal domain 120 202 7.2E-41 T 01-11-2018 IPR001351 Ribosomal protein S3, C-terminal GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 CDA09_19495 5fe5aa82783e3d6a5581b6228501a565 264 TIGRFAM TIGR01009 rpsC_bact: ribosomal protein uS3 1 209 1.4E-94 T 01-11-2018 IPR005704 Ribosomal protein S3, bacterial GO:0003735|GO:0006412|GO:0015935 CDA09_19495 5fe5aa82783e3d6a5581b6228501a565 264 ProSitePatterns PS00548 Ribosomal protein S3 signature. 163 197 - T 01-11-2018 IPR018280 Ribosomal protein S3, conserved site Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 CDA09_19495 5fe5aa82783e3d6a5581b6228501a565 264 SUPERFAMILY SSF54814 2 106 2.3E-38 T 01-11-2018 IPR009019 K homology domain superfamily, prokaryotic type GO:0003723 CDA09_19495 5fe5aa82783e3d6a5581b6228501a565 264 Gene3D G3DSA:3.30.1140.32 108 208 1.7E-44 T 01-11-2018 IPR036419 Ribosomal protein S3, C-terminal domain superfamily GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 CDA09_13580 b82bc39bcf41fcdea07b7308e8ea1610 375 Pfam PF14870 Photosynthesis system II assembly factor YCF48 181 329 4.3E-6 T 01-11-2018 IPR028203 Photosynthesis system II assembly factor Ycf48/Hcf136-like domain CDA09_13580 b82bc39bcf41fcdea07b7308e8ea1610 375 SUPERFAMILY SSF110296 63 336 4.71E-32 T 01-11-2018 CDA09_13580 b82bc39bcf41fcdea07b7308e8ea1610 375 Gene3D G3DSA:2.130.10.10 48 348 2.9E-20 T 01-11-2018 IPR015943 WD40/YVTN repeat-like-containing domain superfamily GO:0005515 CDA09_10585 4273ed4cd9c68779a06a09578b12884e 248 SUPERFAMILY SSF52540 2 246 5.33E-65 T 01-11-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CDA09_10585 4273ed4cd9c68779a06a09578b12884e 248 SMART SM00382 26 224 9.0E-7 T 01-11-2018 IPR003593 AAA+ ATPase domain CDA09_10585 4273ed4cd9c68779a06a09578b12884e 248 Gene3D G3DSA:3.40.50.300 1 248 8.4E-61 T 01-11-2018 CDA09_10585 4273ed4cd9c68779a06a09578b12884e 248 Pfam PF12399 Branched-chain amino acid ATP-binding cassette transporter 224 246 3.5E-11 T 01-11-2018 IPR032823 Branched-chain amino acid ATP-binding cassette transporter, C-terminal CDA09_10585 4273ed4cd9c68779a06a09578b12884e 248 Pfam PF00005 ABC transporter 18 175 2.4E-26 T 01-11-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 CDA09_22770 41578802b7b349f5e5cb82fd55e82657 394 Pfam PF10442 FIST C domain 223 377 1.5E-30 T 01-11-2018 IPR019494 FIST, C-domain Reactome: R-HSA-8951664|Reactome: R-HSA-983168 CDA09_22770 41578802b7b349f5e5cb82fd55e82657 394 PIRSF PIRSF018953 5 394 5.0E-44 T 01-11-2018 IPR016741 Uncharacterised conserved protein UCP018953 CDA09_22770 41578802b7b349f5e5cb82fd55e82657 394 SMART SM00897 43 222 5.3E-31 T 01-11-2018 IPR013702 FIST domain, N-terminal CDA09_22770 41578802b7b349f5e5cb82fd55e82657 394 Pfam PF08495 FIST N domain 46 221 4.5E-23 T 01-11-2018 IPR013702 FIST domain, N-terminal CDA09_22770 41578802b7b349f5e5cb82fd55e82657 394 SMART SM01204 223 378 1.0E-29 T 01-11-2018 IPR019494 FIST, C-domain Reactome: R-HSA-8951664|Reactome: R-HSA-983168 CDA09_13150 34bde0bacc2c3023a9152fa6a730e489 84 Pfam PF02597 ThiS family 5 84 2.8E-15 T 01-11-2018 IPR003749 Sulfur carrier ThiS/MoaD-like Reactome: R-HSA-947581 CDA09_13150 34bde0bacc2c3023a9152fa6a730e489 84 SUPERFAMILY SSF54285 3 84 4.11E-17 T 01-11-2018 IPR016155 Molybdopterin synthase/thiamin biosynthesis sulphur carrier, beta-grasp CDA09_13150 34bde0bacc2c3023a9152fa6a730e489 84 TIGRFAM TIGR01682 moaD: molybdopterin converting factor, subunit 1 3 84 1.9E-20 T 01-11-2018 CDA09_13150 34bde0bacc2c3023a9152fa6a730e489 84 Gene3D G3DSA:3.10.20.30 2 84 3.3E-18 T 01-11-2018 IPR012675 Beta-grasp domain superfamily CDA09_06100 bd2eb863adb6174c3e725be8cff7ec73 243 Gene3D G3DSA:1.20.950.20 12 174 2.3E-19 T 01-11-2018 CDA09_06100 bd2eb863adb6174c3e725be8cff7ec73 243 Pfam PF01292 Prokaryotic cytochrome b561 24 185 1.3E-25 T 01-11-2018 IPR011577 Cytochrome b561, bacterial/Ni-hydrogenase GO:0009055|GO:0016021 CDA09_06100 bd2eb863adb6174c3e725be8cff7ec73 243 SUPERFAMILY SSF81342 20 187 1.62E-34 T 01-11-2018 IPR016174 Di-haem cytochrome, transmembrane GO:0016020|GO:0022904 Reactome: R-HSA-611105 CDA09_21405 5e2aeed3b8fd56884610c86bb42d41b3 509 Pfam PF13817 IS66 C-terminal element 458 495 3.0E-17 T 01-11-2018 IPR039552 Transposase IS66, C-terminal CDA09_21405 5e2aeed3b8fd56884610c86bb42d41b3 509 Pfam PF13005 zinc-finger binding domain of transposase IS66 109 151 1.4E-17 T 01-11-2018 IPR024474 Zinc-finger binding domain of transposase IS66 CDA09_21405 5e2aeed3b8fd56884610c86bb42d41b3 509 Pfam PF13007 Transposase C of IS166 homeodomain 27 101 5.7E-18 T 01-11-2018 IPR024463 Transposase TnpC, homeodomain CDA09_21405 5e2aeed3b8fd56884610c86bb42d41b3 509 Pfam PF03050 Transposase IS66 family 166 451 6.1E-107 T 01-11-2018 IPR004291 Transposase, IS66 CDA09_10020 39460c9fa78f95313ad74ace1fdb8a80 203 Pfam PF04075 F420H(2)-dependent quinone reductase 90 196 1.4E-29 T 01-11-2018 IPR004378 F420H(2)-dependent quinone reductase GO:0016491|GO:0055114 CDA09_10020 39460c9fa78f95313ad74ace1fdb8a80 203 Gene3D G3DSA:2.30.110.10 52 200 1.1E-36 T 01-11-2018 IPR012349 FMN-binding split barrel GO:0048037 CDA09_10020 39460c9fa78f95313ad74ace1fdb8a80 203 TIGRFAM TIGR00026 hi_GC_TIGR00026: deazaflavin-dependent oxidoreductase, nitroreductase family 90 197 1.7E-28 T 01-11-2018 IPR004378 F420H(2)-dependent quinone reductase GO:0016491|GO:0055114 CDA09_11640 829a54624f0cab24cdf1a512f8d6e34c 304 Gene3D G3DSA:1.10.3720.10 58 303 1.9E-58 T 01-11-2018 IPR035906 MetI-like superfamily CDA09_11640 829a54624f0cab24cdf1a512f8d6e34c 304 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 94 300 7.3E-12 T 01-11-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 CDA09_11640 829a54624f0cab24cdf1a512f8d6e34c 304 SUPERFAMILY SSF161098 62 292 6.28E-51 T 01-11-2018 IPR035906 MetI-like superfamily CDA09_13550 35c5131f894fdb73c38f03c565f0875a 318 Pfam PF00355 Rieske [2Fe-2S] domain 4 86 6.2E-19 T 01-11-2018 IPR017941 Rieske [2Fe-2S] iron-sulphur domain GO:0016491|GO:0051537|GO:0055114 CDA09_13550 35c5131f894fdb73c38f03c565f0875a 318 Gene3D G3DSA:2.102.10.10 1 129 4.7E-33 T 01-11-2018 IPR036922 Rieske [2Fe-2S] iron-sulphur domain superfamily GO:0016491|GO:0051537|GO:0055114 CDA09_13550 35c5131f894fdb73c38f03c565f0875a 318 SUPERFAMILY SSF50022 2 117 5.37E-31 T 01-11-2018 IPR036922 Rieske [2Fe-2S] iron-sulphur domain superfamily GO:0016491|GO:0051537|GO:0055114 CDA09_14690 c3e0973d014b80d9d2063d3074206663 928 Gene3D G3DSA:3.30.450.20 367 489 7.6E-36 T 01-11-2018 CDA09_14690 c3e0973d014b80d9d2063d3074206663 928 SUPERFAMILY SSF55073 496 654 1.57E-50 T 01-11-2018 IPR029787 Nucleotide cyclase CDA09_14690 c3e0973d014b80d9d2063d3074206663 928 Gene3D G3DSA:3.30.70.270 490 665 3.2E-63 T 01-11-2018 CDA09_14690 c3e0973d014b80d9d2063d3074206663 928 SMART SM00267 480 652 1.3E-67 T 01-11-2018 IPR000160 GGDEF domain CDA09_14690 c3e0973d014b80d9d2063d3074206663 928 Gene3D G3DSA:3.40.50.2300 1 141 3.0E-30 T 01-11-2018 CDA09_14690 c3e0973d014b80d9d2063d3074206663 928 Gene3D G3DSA:3.30.450.40 175 359 5.7E-32 T 01-11-2018 IPR029016 GAF-like domain superfamily CDA09_14690 c3e0973d014b80d9d2063d3074206663 928 Pfam PF00563 EAL domain 670 903 1.1E-73 T 01-11-2018 IPR001633 EAL domain CDA09_14690 c3e0973d014b80d9d2063d3074206663 928 Pfam PF13185 GAF domain 199 345 8.7E-21 T 01-11-2018 IPR003018 GAF domain GO:0005515 CDA09_14690 c3e0973d014b80d9d2063d3074206663 928 SUPERFAMILY SSF55781 169 345 1.35E-25 T 01-11-2018 CDA09_14690 c3e0973d014b80d9d2063d3074206663 928 Pfam PF00990 Diguanylate cyclase, GGDEF domain 491 647 1.0E-50 T 01-11-2018 IPR000160 GGDEF domain CDA09_14690 c3e0973d014b80d9d2063d3074206663 928 SMART SM00065 191 355 1.5E-10 T 01-11-2018 IPR003018 GAF domain GO:0005515 CDA09_14690 c3e0973d014b80d9d2063d3074206663 928 SUPERFAMILY SSF141868 667 915 1.83E-93 T 01-11-2018 IPR035919 EAL domain superfamily CDA09_14690 c3e0973d014b80d9d2063d3074206663 928 SMART SM00086 438 480 2.0E-8 T 01-11-2018 IPR001610 PAC motif CDA09_14690 c3e0973d014b80d9d2063d3074206663 928 SUPERFAMILY SSF55785 381 480 3.7E-24 T 01-11-2018 IPR035965 PAS domain superfamily CDA09_14690 c3e0973d014b80d9d2063d3074206663 928 SMART SM00091 363 432 2.4E-6 T 01-11-2018 IPR000014 PAS domain CDA09_14690 c3e0973d014b80d9d2063d3074206663 928 SMART SM00448 2 116 9.3E-28 T 01-11-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 CDA09_14690 c3e0973d014b80d9d2063d3074206663 928 SMART SM00052 662 908 1.9E-121 T 01-11-2018 IPR001633 EAL domain CDA09_14690 c3e0973d014b80d9d2063d3074206663 928 Gene3D G3DSA:3.20.20.450 666 916 8.7E-107 T 01-11-2018 IPR035919 EAL domain superfamily CDA09_14690 c3e0973d014b80d9d2063d3074206663 928 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 487 650 1.1E-43 T 01-11-2018 IPR000160 GGDEF domain CDA09_14690 c3e0973d014b80d9d2063d3074206663 928 SUPERFAMILY SSF52172 1 123 1.02E-30 T 01-11-2018 IPR011006 CheY-like superfamily CDA09_14690 c3e0973d014b80d9d2063d3074206663 928 Pfam PF13426 PAS domain 384 479 3.1E-20 T 01-11-2018 IPR000014 PAS domain CDA09_14690 c3e0973d014b80d9d2063d3074206663 928 Pfam PF00072 Response regulator receiver domain 4 116 5.3E-22 T 01-11-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 CDA09_14690 c3e0973d014b80d9d2063d3074206663 928 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 384 487 9.9E-20 T 01-11-2018 IPR000014 PAS domain CDA09_22240 551bbacd37d316ce0cae307d84a2e98f 210 TIGRFAM TIGR00421 ubiX_pad: polyprenyl P-hydroxybenzoate and phenylacrylic acid decarboxylases 9 202 2.0E-60 T 01-11-2018 IPR004507 Flavin prenyltransferase UbiX-like CDA09_22240 551bbacd37d316ce0cae307d84a2e98f 210 Gene3D G3DSA:3.40.50.1950 4 208 2.0E-81 T 01-11-2018 IPR036551 Flavin prenyltransferase-like GO:0003824 Reactome: R-HSA-196783 CDA09_22240 551bbacd37d316ce0cae307d84a2e98f 210 SUPERFAMILY SSF52507 8 204 1.44E-59 T 01-11-2018 IPR036551 Flavin prenyltransferase-like GO:0003824 Reactome: R-HSA-196783 CDA09_22240 551bbacd37d316ce0cae307d84a2e98f 210 Pfam PF02441 Flavoprotein 8 183 2.0E-26 T 01-11-2018 IPR003382 Flavoprotein GO:0003824 Reactome: R-HSA-196783 CDA09_22240 551bbacd37d316ce0cae307d84a2e98f 210 Hamap MF_01984 Flavin prenyltransferase UbiX [ubiX]. 7 204 35.203 T 01-11-2018 IPR004507 Flavin prenyltransferase UbiX-like CDA09_19485 75af2c6fc05caf8500a222a3a25aed88 64 Hamap MF_00374 50S ribosomal protein L29 [rpmC]. 1 60 17.701 T 01-11-2018 IPR001854 Ribosomal protein L29/L35 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 CDA09_19485 75af2c6fc05caf8500a222a3a25aed88 64 SUPERFAMILY SSF46561 1 61 8.76E-21 T 01-11-2018 IPR036049 Ribosomal protein L29/L35 superfamily GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 CDA09_19485 75af2c6fc05caf8500a222a3a25aed88 64 TIGRFAM TIGR00012 L29: ribosomal protein uL29 5 60 1.8E-20 T 01-11-2018 IPR001854 Ribosomal protein L29/L35 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 CDA09_19485 75af2c6fc05caf8500a222a3a25aed88 64 Gene3D G3DSA:1.10.287.310 1 62 6.7E-27 T 01-11-2018 CDA09_19485 75af2c6fc05caf8500a222a3a25aed88 64 Pfam PF00831 Ribosomal L29 protein 4 60 9.1E-22 T 01-11-2018 IPR001854 Ribosomal protein L29/L35 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 CDA09_19485 75af2c6fc05caf8500a222a3a25aed88 64 ProSitePatterns PS00579 Ribosomal protein L29 signature. 39 53 - T 01-11-2018 IPR018254 Ribosomal protein L29, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 CDA09_00820 3963e34cb24e51754a18eb2679eeb0ab 172 Pfam PF13436 Glycine-zipper domain 70 108 2.5E-6 T 01-11-2018 IPR025693 Glycine-zipper-containing OmpA-like membrane domain CDA09_19815 56823b4266d944ad617152f08c1f8c83 314 Gene3D G3DSA:3.40.50.1980 34 199 2.7E-28 T 01-11-2018 CDA09_19815 56823b4266d944ad617152f08c1f8c83 314 Gene3D G3DSA:3.40.50.1980 206 310 3.5E-8 T 01-11-2018 CDA09_19815 56823b4266d944ad617152f08c1f8c83 314 SUPERFAMILY SSF53807 33 309 2.06E-59 T 01-11-2018 CDA09_19815 56823b4266d944ad617152f08c1f8c83 314 Pfam PF01297 Zinc-uptake complex component A periplasmic 40 305 6.9E-32 T 01-11-2018 IPR006127 Periplasmic solute binding protein, ZnuA-like GO:0030001|GO:0046872 CDA09_12085 484459054870866057df7ce8212ea9f2 385 Gene3D G3DSA:3.40.50.2300 27 354 2.6E-117 T 01-11-2018 CDA09_12085 484459054870866057df7ce8212ea9f2 385 Pfam PF13458 Periplasmic binding protein 25 362 5.0E-77 T 01-11-2018 IPR028081 Leucine-binding protein domain CDA09_12085 484459054870866057df7ce8212ea9f2 385 Gene3D G3DSA:3.40.50.2300 143 360 2.6E-117 T 01-11-2018 CDA09_12085 484459054870866057df7ce8212ea9f2 385 SUPERFAMILY SSF53822 26 379 9.59E-93 T 01-11-2018 IPR028082 Periplasmic binding protein-like I CDA09_07835 9989c564384063b5622332cd2f0a3d45 321 Gene3D G3DSA:3.60.15.10 28 268 4.8E-48 T 01-11-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like CDA09_07835 9989c564384063b5622332cd2f0a3d45 321 Pfam PF00753 Metallo-beta-lactamase superfamily 60 243 1.9E-20 T 01-11-2018 IPR001279 Metallo-beta-lactamase CDA09_07835 9989c564384063b5622332cd2f0a3d45 321 SUPERFAMILY SSF56281 11 315 1.2E-64 T 01-11-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like CDA09_07835 9989c564384063b5622332cd2f0a3d45 321 SMART SM00849 63 243 1.4E-18 T 01-11-2018 IPR001279 Metallo-beta-lactamase CDA09_07835 9989c564384063b5622332cd2f0a3d45 321 TIGRFAM TIGR04558 SoxH_rel_PQQ_1: quinoprotein relay system zinc metallohydrolase 1 32 315 1.9E-127 T 01-11-2018 IPR030811 Quinoprotein relay system zinc metallohydrolase 1 CDA09_09875 501e956e26d41bb787b71f2894961647 490 Gene3D G3DSA:3.10.310.70 81 194 1.4E-21 T 01-11-2018 CDA09_09875 501e956e26d41bb787b71f2894961647 490 Pfam PF07969 Amidohydrolase family 52 478 2.5E-29 T 01-11-2018 IPR013108 Amidohydrolase 3 CDA09_09875 501e956e26d41bb787b71f2894961647 490 SUPERFAMILY SSF51338 21 484 7.62E-10 T 01-11-2018 IPR011059 Metal-dependent hydrolase, composite domain superfamily GO:0016810 CDA09_09875 501e956e26d41bb787b71f2894961647 490 SUPERFAMILY SSF51556 63 432 1.47E-17 T 01-11-2018 IPR032466 Metal-dependent hydrolase CDA09_09875 501e956e26d41bb787b71f2894961647 490 Gene3D G3DSA:3.20.20.140 63 253 1.4E-21 T 01-11-2018 CDA09_09875 501e956e26d41bb787b71f2894961647 490 Gene3D G3DSA:2.30.40.10 32 62 1.4E-21 T 01-11-2018 IPR011059 Metal-dependent hydrolase, composite domain superfamily GO:0016810 CDA09_09875 501e956e26d41bb787b71f2894961647 490 Gene3D G3DSA:3.20.20.140 274 434 6.4E-29 T 01-11-2018 CDA09_01525 5a094020c7a82209ef51ad6fa047e6b4 307 SUPERFAMILY SSF51735 4 304 8.24E-67 T 01-11-2018 IPR036291 NAD(P)-binding domain superfamily CDA09_01525 5a094020c7a82209ef51ad6fa047e6b4 307 Gene3D G3DSA:3.40.50.720 3 305 2.7E-62 T 01-11-2018 CDA09_01525 5a094020c7a82209ef51ad6fa047e6b4 307 Pfam PF01370 NAD dependent epimerase/dehydratase family 5 226 9.9E-40 T 01-11-2018 IPR001509 NAD-dependent epimerase/dehydratase GO:0003824|GO:0050662 CDA09_02260 ba30969191e79e0996f3b67a8ce2b1f7 379 SMART SM00947 196 358 5.0E-67 T 01-11-2018 IPR001765 Carbonic anhydrase GO:0004089|GO:0008270 KEGG: 00910+4.2.1.1|MetaCyc: PWY-241|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6142|MetaCyc: PWY-7115|MetaCyc: PWY-7117 CDA09_02260 ba30969191e79e0996f3b67a8ce2b1f7 379 ProSitePatterns PS00705 Prokaryotic-type carbonic anhydrases signature 2. 248 268 - T 01-11-2018 IPR015892 Carbonic anhydrase, prokaryotic-like, conserved site GO:0004089|GO:0008270|GO:0015976 KEGG: 00910+4.2.1.1|MetaCyc: PWY-241|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6142|MetaCyc: PWY-7115|MetaCyc: PWY-7117 CDA09_02260 ba30969191e79e0996f3b67a8ce2b1f7 379 Pfam PF00484 Carbonic anhydrase 203 354 1.1E-47 T 01-11-2018 IPR001765 Carbonic anhydrase GO:0004089|GO:0008270 KEGG: 00910+4.2.1.1|MetaCyc: PWY-241|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6142|MetaCyc: PWY-7115|MetaCyc: PWY-7117 CDA09_02260 ba30969191e79e0996f3b67a8ce2b1f7 379 ProSitePatterns PS00704 Prokaryotic-type carbonic anhydrases signature 1. 208 215 - T 01-11-2018 IPR015892 Carbonic anhydrase, prokaryotic-like, conserved site GO:0004089|GO:0008270|GO:0015976 KEGG: 00910+4.2.1.1|MetaCyc: PWY-241|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6142|MetaCyc: PWY-7115|MetaCyc: PWY-7117 CDA09_02260 ba30969191e79e0996f3b67a8ce2b1f7 379 Pfam PF00583 Acetyltransferase (GNAT) family 53 136 2.5E-15 T 01-11-2018 IPR000182 GNAT domain CDA09_02260 ba30969191e79e0996f3b67a8ce2b1f7 379 SUPERFAMILY SSF55729 4 160 1.34E-25 T 01-11-2018 IPR016181 Acyl-CoA N-acyltransferase CDA09_02260 ba30969191e79e0996f3b67a8ce2b1f7 379 Gene3D G3DSA:3.40.1050.10 165 379 1.0E-76 T 01-11-2018 IPR036874 Carbonic anhydrase superfamily GO:0004089|GO:0008270 CDA09_02260 ba30969191e79e0996f3b67a8ce2b1f7 379 Gene3D G3DSA:3.40.630.30 6 158 5.8E-28 T 01-11-2018 CDA09_02260 ba30969191e79e0996f3b67a8ce2b1f7 379 SUPERFAMILY SSF53056 170 376 1.01E-69 T 01-11-2018 IPR036874 Carbonic anhydrase superfamily GO:0004089|GO:0008270 CDA09_17130 d9603591c0603c9dda9a4248ba74bfd8 298 SUPERFAMILY SSF51735 1 254 9.63E-60 T 01-11-2018 IPR036291 NAD(P)-binding domain superfamily CDA09_17130 d9603591c0603c9dda9a4248ba74bfd8 298 Pfam PF00106 short chain dehydrogenase 7 204 5.8E-48 T 01-11-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CDA09_17130 d9603591c0603c9dda9a4248ba74bfd8 298 Gene3D G3DSA:3.40.50.720 1 288 4.9E-76 T 01-11-2018 CDA09_17130 d9603591c0603c9dda9a4248ba74bfd8 298 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 82 93 7.6E-22 T 01-11-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CDA09_17130 d9603591c0603c9dda9a4248ba74bfd8 298 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 159 178 7.6E-22 T 01-11-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CDA09_17130 d9603591c0603c9dda9a4248ba74bfd8 298 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 133 149 7.6E-22 T 01-11-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CDA09_17130 d9603591c0603c9dda9a4248ba74bfd8 298 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 8 25 7.6E-22 T 01-11-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CDA09_17130 d9603591c0603c9dda9a4248ba74bfd8 298 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 182 199 7.6E-22 T 01-11-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CDA09_17130 d9603591c0603c9dda9a4248ba74bfd8 298 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 159 178 3.0E-8 T 01-11-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CDA09_17130 d9603591c0603c9dda9a4248ba74bfd8 298 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 82 93 3.0E-8 T 01-11-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CDA09_17130 d9603591c0603c9dda9a4248ba74bfd8 298 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 139 147 3.0E-8 T 01-11-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CDA09_08805 b3cf26736054cb99f637b9eadd7857cd 366 SUPERFAMILY SSF51395 3 362 1.25E-122 T 01-11-2018 CDA09_08805 b3cf26736054cb99f637b9eadd7857cd 366 Gene3D G3DSA:3.20.20.70 5 366 8.8E-145 T 01-11-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 CDA09_08805 b3cf26736054cb99f637b9eadd7857cd 366 Pfam PF00724 NADH:flavin oxidoreductase / NADH oxidase family 6 339 2.2E-90 T 01-11-2018 IPR001155 NADH:flavin oxidoreductase/NADH oxidase, N-terminal GO:0010181|GO:0016491|GO:0055114 CDA09_10965 dfc1e042e5edc00f5c6187c12b0e76ef 453 ProSitePatterns PS00217 Sugar transport proteins signature 2. 121 146 - T 01-11-2018 IPR005829 Sugar transporter, conserved site GO:0005215|GO:0016021|GO:0055085 CDA09_10965 dfc1e042e5edc00f5c6187c12b0e76ef 453 Gene3D G3DSA:1.20.1250.20 19 435 6.4E-69 T 01-11-2018 CDA09_10965 dfc1e042e5edc00f5c6187c12b0e76ef 453 SUPERFAMILY SSF103473 9 439 1.7E-78 T 01-11-2018 IPR036259 MFS transporter superfamily CDA09_10965 dfc1e042e5edc00f5c6187c12b0e76ef 453 Pfam PF07690 Major Facilitator Superfamily 30 202 1.2E-31 T 01-11-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 CDA09_10965 dfc1e042e5edc00f5c6187c12b0e76ef 453 Pfam PF07690 Major Facilitator Superfamily 262 436 6.6E-17 T 01-11-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 CDA09_10965 dfc1e042e5edc00f5c6187c12b0e76ef 453 ProSitePatterns PS00216 Sugar transport proteins signature 1. 79 96 - T 01-11-2018 IPR005829 Sugar transporter, conserved site GO:0005215|GO:0016021|GO:0055085 CDA09_15350 dac8acd48d14ca879424e3219840e02f 402 SUPERFAMILY SSF53383 2 401 1.44E-117 T 01-11-2018 IPR015424 Pyridoxal phosphate-dependent transferase CDA09_15350 dac8acd48d14ca879424e3219840e02f 402 Pfam PF00155 Aminotransferase class I and II 30 396 1.0E-79 T 01-11-2018 IPR004839 Aminotransferase, class I/classII GO:0009058|GO:0030170 CDA09_15350 dac8acd48d14ca879424e3219840e02f 402 Gene3D G3DSA:3.40.640.10 64 304 1.6E-161 T 01-11-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 CDA09_15350 dac8acd48d14ca879424e3219840e02f 402 PRINTS PR00799 Aspartate aminotransferase signature 277 302 1.5E-38 T 01-11-2018 IPR000796 Aspartate/other aminotransferase GO:0006520|GO:0008483 KEGG: 00220+2.6.1.1|KEGG: 00250+2.6.1.1|KEGG: 00270+2.6.1.1|KEGG: 00330+2.6.1.1|KEGG: 00350+2.6.1.1|KEGG: 00360+2.6.1.1|KEGG: 00400+2.6.1.1|KEGG: 00401+2.6.1.1|KEGG: 00710+2.6.1.1|KEGG: 00950+2.6.1.1|KEGG: 00960+2.6.1.1|MetaCyc: PWY-5913|MetaCyc: PWY-6318|MetaCyc: PWY-6638|MetaCyc: PWY-6642|MetaCyc: PWY-6643|MetaCyc: PWY-7115|MetaCyc: PWY-7117|MetaCyc: PWY-7383 CDA09_15350 dac8acd48d14ca879424e3219840e02f 402 PRINTS PR00799 Aspartate aminotransferase signature 210 222 1.5E-38 T 01-11-2018 IPR000796 Aspartate/other aminotransferase GO:0006520|GO:0008483 KEGG: 00220+2.6.1.1|KEGG: 00250+2.6.1.1|KEGG: 00270+2.6.1.1|KEGG: 00330+2.6.1.1|KEGG: 00350+2.6.1.1|KEGG: 00360+2.6.1.1|KEGG: 00400+2.6.1.1|KEGG: 00401+2.6.1.1|KEGG: 00710+2.6.1.1|KEGG: 00950+2.6.1.1|KEGG: 00960+2.6.1.1|MetaCyc: PWY-5913|MetaCyc: PWY-6318|MetaCyc: PWY-6638|MetaCyc: PWY-6642|MetaCyc: PWY-6643|MetaCyc: PWY-7115|MetaCyc: PWY-7117|MetaCyc: PWY-7383 CDA09_15350 dac8acd48d14ca879424e3219840e02f 402 PRINTS PR00799 Aspartate aminotransferase signature 345 363 1.5E-38 T 01-11-2018 IPR000796 Aspartate/other aminotransferase GO:0006520|GO:0008483 KEGG: 00220+2.6.1.1|KEGG: 00250+2.6.1.1|KEGG: 00270+2.6.1.1|KEGG: 00330+2.6.1.1|KEGG: 00350+2.6.1.1|KEGG: 00360+2.6.1.1|KEGG: 00400+2.6.1.1|KEGG: 00401+2.6.1.1|KEGG: 00710+2.6.1.1|KEGG: 00950+2.6.1.1|KEGG: 00960+2.6.1.1|MetaCyc: PWY-5913|MetaCyc: PWY-6318|MetaCyc: PWY-6638|MetaCyc: PWY-6642|MetaCyc: PWY-6643|MetaCyc: PWY-7115|MetaCyc: PWY-7117|MetaCyc: PWY-7383 CDA09_15350 dac8acd48d14ca879424e3219840e02f 402 PRINTS PR00799 Aspartate aminotransferase signature 179 198 1.5E-38 T 01-11-2018 IPR000796 Aspartate/other aminotransferase GO:0006520|GO:0008483 KEGG: 00220+2.6.1.1|KEGG: 00250+2.6.1.1|KEGG: 00270+2.6.1.1|KEGG: 00330+2.6.1.1|KEGG: 00350+2.6.1.1|KEGG: 00360+2.6.1.1|KEGG: 00400+2.6.1.1|KEGG: 00401+2.6.1.1|KEGG: 00710+2.6.1.1|KEGG: 00950+2.6.1.1|KEGG: 00960+2.6.1.1|MetaCyc: PWY-5913|MetaCyc: PWY-6318|MetaCyc: PWY-6638|MetaCyc: PWY-6642|MetaCyc: PWY-6643|MetaCyc: PWY-7115|MetaCyc: PWY-7117|MetaCyc: PWY-7383 CDA09_15350 dac8acd48d14ca879424e3219840e02f 402 Gene3D G3DSA:3.90.1150.10 9 396 1.6E-161 T 01-11-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 CDA09_15350 dac8acd48d14ca879424e3219840e02f 402 ProSitePatterns PS00105 Aminotransferases class-I pyridoxal-phosphate attachment site. 247 260 - T 01-11-2018 IPR004838 Aminotransferases, class-I, pyridoxal-phosphate-binding site GO:0003824|GO:0009058|GO:0030170 CDA09_07720 bbbbcacb941d0160ab4cb8d9df6552db 395 Gene3D G3DSA:3.30.565.10 250 395 1.4E-36 T 01-11-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily CDA09_07720 bbbbcacb941d0160ab4cb8d9df6552db 395 Pfam PF00512 His Kinase A (phospho-acceptor) domain 163 248 2.9E-10 T 01-11-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 CDA09_07720 bbbbcacb941d0160ab4cb8d9df6552db 395 SUPERFAMILY SSF55874 244 395 8.64E-39 T 01-11-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily CDA09_07720 bbbbcacb941d0160ab4cb8d9df6552db 395 SMART SM00387 289 395 3.7E-29 T 01-11-2018 IPR003594 Histidine kinase/HSP90-like ATPase CDA09_07720 bbbbcacb941d0160ab4cb8d9df6552db 395 SUPERFAMILY SSF47384 156 247 1.51E-6 T 01-11-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 CDA09_07720 bbbbcacb941d0160ab4cb8d9df6552db 395 Gene3D G3DSA:1.10.287.130 138 244 5.0E-23 T 01-11-2018 CDA09_07720 bbbbcacb941d0160ab4cb8d9df6552db 395 SMART SM00388 162 249 0.003 T 01-11-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 CDA09_07720 bbbbcacb941d0160ab4cb8d9df6552db 395 PRINTS PR00344 Bacterial sensor protein C-terminal signature 326 340 6.0E-17 T 01-11-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 CDA09_07720 bbbbcacb941d0160ab4cb8d9df6552db 395 PRINTS PR00344 Bacterial sensor protein C-terminal signature 357 375 6.0E-17 T 01-11-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 CDA09_07720 bbbbcacb941d0160ab4cb8d9df6552db 395 PRINTS PR00344 Bacterial sensor protein C-terminal signature 381 394 6.0E-17 T 01-11-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 CDA09_07720 bbbbcacb941d0160ab4cb8d9df6552db 395 PRINTS PR00344 Bacterial sensor protein C-terminal signature 344 354 6.0E-17 T 01-11-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 CDA09_07720 bbbbcacb941d0160ab4cb8d9df6552db 395 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 292 394 4.7E-20 T 01-11-2018 IPR003594 Histidine kinase/HSP90-like ATPase CDA09_03670 e229ce9a5232c8649a44bea2d5241301 664 Gene3D G3DSA:1.10.10.10 578 662 9.0E-36 T 01-11-2018 IPR036388 Winged helix-like DNA-binding domain superfamily CDA09_03670 e229ce9a5232c8649a44bea2d5241301 664 Hamap MF_00963 RNA polymerase sigma factor RpoD [rpoD]. 21 661 43.457 T 01-11-2018 IPR028630 RNA polymerase sigma factor RpoD GO:0006352|GO:0016987 CDA09_03670 e229ce9a5232c8649a44bea2d5241301 664 TIGRFAM TIGR02393 RpoD_Cterm: RNA polymerase sigma factor RpoD 424 660 2.4E-119 T 01-11-2018 IPR012760 RNA polymerase sigma factor RpoD, C-terminal GO:0003677|GO:0006352|GO:0006355|GO:0016987 CDA09_03670 e229ce9a5232c8649a44bea2d5241301 664 Pfam PF04545 Sigma-70, region 4 596 649 6.7E-19 T 01-11-2018 IPR007630 RNA polymerase sigma-70 region 4 GO:0003700|GO:0006352|GO:0006355 CDA09_03670 e229ce9a5232c8649a44bea2d5241301 664 PRINTS PR00046 Major sigma-70 factor signature 600 612 9.1E-31 T 01-11-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 CDA09_03670 e229ce9a5232c8649a44bea2d5241301 664 PRINTS PR00046 Major sigma-70 factor signature 636 647 9.1E-31 T 01-11-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 CDA09_03670 e229ce9a5232c8649a44bea2d5241301 664 PRINTS PR00046 Major sigma-70 factor signature 621 636 9.1E-31 T 01-11-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 CDA09_03670 e229ce9a5232c8649a44bea2d5241301 664 PRINTS PR00046 Major sigma-70 factor signature 476 484 9.1E-31 T 01-11-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 CDA09_03670 e229ce9a5232c8649a44bea2d5241301 664 PRINTS PR00046 Major sigma-70 factor signature 452 465 9.1E-31 T 01-11-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 CDA09_03670 e229ce9a5232c8649a44bea2d5241301 664 Pfam PF00140 Sigma-70 factor, region 1.2 137 168 2.8E-13 T 01-11-2018 IPR009042 RNA polymerase sigma-70 region 1.2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 CDA09_03670 e229ce9a5232c8649a44bea2d5241301 664 Pfam PF03979 Sigma-70 factor, region 1.1 42 119 5.3E-27 T 01-11-2018 IPR007127 RNA polymerase sigma factor 70, region 1.1 GO:0003677|GO:0006355 CDA09_03670 e229ce9a5232c8649a44bea2d5241301 664 SUPERFAMILY SSF88659 558 660 4.14E-26 T 01-11-2018 IPR013324 RNA polymerase sigma factor, region 3/4-like CDA09_03670 e229ce9a5232c8649a44bea2d5241301 664 SUPERFAMILY SSF88946 154 495 3.53E-97 T 01-11-2018 IPR013325 RNA polymerase sigma factor, region 2 GO:0003700|GO:0006352|GO:0006355 CDA09_03670 e229ce9a5232c8649a44bea2d5241301 664 SUPERFAMILY SSF88659 501 574 8.18E-19 T 01-11-2018 IPR013324 RNA polymerase sigma factor, region 3/4-like CDA09_03670 e229ce9a5232c8649a44bea2d5241301 664 ProSitePatterns PS00715 Sigma-70 factors family signature 1. 452 465 - T 01-11-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 CDA09_03670 e229ce9a5232c8649a44bea2d5241301 664 Pfam PF04546 Sigma-70, non-essential region 178 397 5.6E-62 T 01-11-2018 IPR007631 RNA polymerase sigma factor 70, non-essential domain GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 CDA09_03670 e229ce9a5232c8649a44bea2d5241301 664 ProSitePatterns PS00716 Sigma-70 factors family signature 2. 621 647 - T 01-11-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 CDA09_03670 e229ce9a5232c8649a44bea2d5241301 664 Gene3D G3DSA:1.10.220.120 40 101 5.8E-26 T 01-11-2018 CDA09_03670 e229ce9a5232c8649a44bea2d5241301 664 Pfam PF04542 Sigma-70 region 2 430 497 7.2E-21 T 01-11-2018 IPR007627 RNA polymerase sigma-70 region 2 GO:0003700|GO:0006352|GO:0006355 CDA09_03670 e229ce9a5232c8649a44bea2d5241301 664 Gene3D G3DSA:1.10.601.10 152 497 3.6E-130 T 01-11-2018 CDA09_03670 e229ce9a5232c8649a44bea2d5241301 664 Pfam PF04539 Sigma-70 region 3 507 582 4.9E-25 T 01-11-2018 IPR007624 RNA polymerase sigma-70 region 3 GO:0003700|GO:0006352|GO:0006355 CDA09_03670 e229ce9a5232c8649a44bea2d5241301 664 TIGRFAM TIGR02937 sigma70-ECF: RNA polymerase sigma factor, sigma-70 family 424 649 8.1E-38 T 01-11-2018 IPR014284 RNA polymerase sigma-70 like domain GO:0003700|GO:0006352|GO:0006355 CDA09_03670 e229ce9a5232c8649a44bea2d5241301 664 Gene3D G3DSA:1.10.10.10 501 576 3.1E-30 T 01-11-2018 IPR036388 Winged helix-like DNA-binding domain superfamily CDA09_05615 b6d1f20e8edbfdb53ff6dbb7e5f9a77a 358 Pfam PF03747 ADP-ribosylglycohydrolase 12 334 2.3E-55 T 01-11-2018 IPR005502 ADP-ribosylation/Crystallin J1 CDA09_05615 b6d1f20e8edbfdb53ff6dbb7e5f9a77a 358 Gene3D G3DSA:1.10.4080.10 2 357 2.1E-36 T 01-11-2018 IPR036705 ADP-ribosylation/Crystallin J1 superfamily CDA09_05615 b6d1f20e8edbfdb53ff6dbb7e5f9a77a 358 SUPERFAMILY SSF101478 6 355 3.01E-54 T 01-11-2018 IPR036705 ADP-ribosylation/Crystallin J1 superfamily CDA09_14885 39257695ab6b3bc2640034a68d20f1f1 605 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 5 152 2.1E-24 T 01-11-2018 IPR005225 Small GTP-binding protein domain GO:0005525 CDA09_14885 39257695ab6b3bc2640034a68d20f1f1 605 PRINTS PR00315 GTP-binding elongation factor signature 71 81 4.9E-15 T 01-11-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 CDA09_14885 39257695ab6b3bc2640034a68d20f1f1 605 PRINTS PR00315 GTP-binding elongation factor signature 87 98 4.9E-15 T 01-11-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 CDA09_14885 39257695ab6b3bc2640034a68d20f1f1 605 PRINTS PR00315 GTP-binding elongation factor signature 123 132 4.9E-15 T 01-11-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 CDA09_14885 39257695ab6b3bc2640034a68d20f1f1 605 PRINTS PR00315 GTP-binding elongation factor signature 51 59 4.9E-15 T 01-11-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 CDA09_14885 39257695ab6b3bc2640034a68d20f1f1 605 PRINTS PR00315 GTP-binding elongation factor signature 7 20 4.9E-15 T 01-11-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 CDA09_14885 39257695ab6b3bc2640034a68d20f1f1 605 Gene3D G3DSA:2.40.50.250 482 598 2.3E-131 T 01-11-2018 CDA09_14885 39257695ab6b3bc2640034a68d20f1f1 605 Gene3D G3DSA:3.40.50.300 2 198 6.9E-68 T 01-11-2018 CDA09_14885 39257695ab6b3bc2640034a68d20f1f1 605 Gene3D G3DSA:2.40.30.10 199 298 1.9E-29 T 01-11-2018 CDA09_14885 39257695ab6b3bc2640034a68d20f1f1 605 Pfam PF00009 Elongation factor Tu GTP binding domain 4 195 2.0E-56 T 01-11-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 CDA09_14885 39257695ab6b3bc2640034a68d20f1f1 605 Pfam PF00679 Elongation factor G C-terminus 396 479 6.3E-23 T 01-11-2018 IPR000640 Elongation factor EFG, domain V-like CDA09_14885 39257695ab6b3bc2640034a68d20f1f1 605 SUPERFAMILY SSF50447 151 297 9.59E-30 T 01-11-2018 IPR009000 Translation protein, beta-barrel domain superfamily CDA09_14885 39257695ab6b3bc2640034a68d20f1f1 605 Gene3D G3DSA:3.30.70.240 389 481 2.3E-131 T 01-11-2018 CDA09_14885 39257695ab6b3bc2640034a68d20f1f1 605 SUPERFAMILY SSF52540 3 206 1.99E-58 T 01-11-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CDA09_14885 39257695ab6b3bc2640034a68d20f1f1 605 SMART SM00838 395 483 8.4E-4 T 01-11-2018 IPR000640 Elongation factor EFG, domain V-like CDA09_14885 39257695ab6b3bc2640034a68d20f1f1 605 SUPERFAMILY SSF54980 398 511 1.7E-30 T 01-11-2018 IPR035647 EF-G domain III/V-like CDA09_14885 39257695ab6b3bc2640034a68d20f1f1 605 SUPERFAMILY SSF54980 302 387 7.19E-14 T 01-11-2018 IPR035647 EF-G domain III/V-like CDA09_14885 39257695ab6b3bc2640034a68d20f1f1 605 Pfam PF03144 Elongation factor Tu domain 2 220 289 3.8E-10 T 01-11-2018 IPR004161 Translation elongation factor EFTu-like, domain 2 GO:0005525 CDA09_14885 39257695ab6b3bc2640034a68d20f1f1 605 ProSitePatterns PS00301 Translational (tr)-type guanine nucleotide-binding (G) domain signature. 44 59 - T 01-11-2018 IPR031157 Tr-type G domain, conserved site CDA09_14885 39257695ab6b3bc2640034a68d20f1f1 605 TIGRFAM TIGR01394 TypA_BipA: GTP-binding protein TypA/BipA 5 598 1.1E-289 T 01-11-2018 IPR006298 GTP-binding protein TypA GO:0005525 CDA09_14885 39257695ab6b3bc2640034a68d20f1f1 605 Gene3D G3DSA:3.30.70.870 306 589 2.3E-131 T 01-11-2018 CDA09_04785 5a26f20f3d0005f5d27b908d887a5081 215 SMART SM00448 8 120 2.1E-32 T 01-11-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 CDA09_04785 5a26f20f3d0005f5d27b908d887a5081 215 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 153 167 2.3E-6 T 01-11-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 CDA09_04785 5a26f20f3d0005f5d27b908d887a5081 215 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 183 195 2.3E-6 T 01-11-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 CDA09_04785 5a26f20f3d0005f5d27b908d887a5081 215 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 167 183 2.3E-6 T 01-11-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 CDA09_04785 5a26f20f3d0005f5d27b908d887a5081 215 Pfam PF00072 Response regulator receiver domain 11 120 9.4E-28 T 01-11-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 CDA09_04785 5a26f20f3d0005f5d27b908d887a5081 215 SUPERFAMILY SSF52172 7 135 9.96E-34 T 01-11-2018 IPR011006 CheY-like superfamily CDA09_04785 5a26f20f3d0005f5d27b908d887a5081 215 Gene3D G3DSA:3.40.50.12740 8 213 7.5E-57 T 01-11-2018 CDA09_04785 5a26f20f3d0005f5d27b908d887a5081 215 Pfam PF00196 Bacterial regulatory proteins, luxR family 152 207 7.1E-12 T 01-11-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 CDA09_04785 5a26f20f3d0005f5d27b908d887a5081 215 SUPERFAMILY SSF46894 143 213 2.18E-16 T 01-11-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 CDA09_04785 5a26f20f3d0005f5d27b908d887a5081 215 SMART SM00421 150 207 8.0E-12 T 01-11-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 CDA09_06145 3bde1fdcf71c4cd436fefef667a1f067 163 TIGRFAM TIGR00119 acolac_sm: acetolactate synthase, small subunit 1 157 2.1E-64 T 01-11-2018 IPR004789 Acetolactate synthase, small subunit GO:0003984|GO:0009082 KEGG: 00290+2.2.1.6|KEGG: 00650+2.2.1.6|KEGG: 00660+2.2.1.6|KEGG: 00770+2.2.1.6|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-5938|MetaCyc: PWY-5939|MetaCyc: PWY-6389|MetaCyc: PWY-7111 CDA09_06145 3bde1fdcf71c4cd436fefef667a1f067 163 ProDom PD002844 SMALL SUBUNIT ACETOLACTATE SYNTHASE SYNTHASE TRANSFERASE ACID BIOSYNTHESIS III LYASE 1 76 3.0E-36 T 01-11-2018 CDA09_06145 3bde1fdcf71c4cd436fefef667a1f067 163 Pfam PF13710 ACT domain 12 73 8.8E-17 T 01-11-2018 CDA09_06145 3bde1fdcf71c4cd436fefef667a1f067 163 Gene3D G3DSA:3.30.70.260 1 78 1.7E-36 T 01-11-2018 CDA09_06145 3bde1fdcf71c4cd436fefef667a1f067 163 SUPERFAMILY SSF55021 79 162 5.95E-26 T 01-11-2018 CDA09_06145 3bde1fdcf71c4cd436fefef667a1f067 163 SUPERFAMILY SSF55021 1 76 3.23E-23 T 01-11-2018 CDA09_06145 3bde1fdcf71c4cd436fefef667a1f067 163 Gene3D G3DSA:3.30.70.1150 83 163 4.1E-29 T 01-11-2018 IPR027271 Acetolactate synthase/Transcription factor NikR, C-terminal CDA09_06145 3bde1fdcf71c4cd436fefef667a1f067 163 Pfam PF10369 Small subunit of acetolactate synthase 84 157 6.0E-27 T 01-11-2018 IPR019455 Acetolactate synthase, small subunit, C-terminal KEGG: 00290+2.2.1.6|KEGG: 00650+2.2.1.6|KEGG: 00660+2.2.1.6|KEGG: 00770+2.2.1.6|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-5938|MetaCyc: PWY-5939|MetaCyc: PWY-6389|MetaCyc: PWY-7111 CDA09_02695 c9086f9994ce0d198dfa33be614c4932 322 Pfam PF00892 EamA-like transporter family 3 110 2.1E-10 T 01-11-2018 IPR000620 EamA domain GO:0016020|GO:0016021 CDA09_02695 c9086f9994ce0d198dfa33be614c4932 322 SUPERFAMILY SSF103481 232 315 3.53E-8 T 01-11-2018 CDA09_18895 595da2e93580c8bf0ff615b73c45a7ae 616 ProSitePatterns PS00886 Dihydroxy-acid and 6-phosphogluconate dehydratases signature 1. 122 132 - T 01-11-2018 IPR020558 Dihydroxy-acid/6-phosphogluconate dehydratase, conserved site GO:0003824 KEGG: 00290+4.2.1.9|KEGG: 00770+4.2.1.9|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-7111 CDA09_18895 595da2e93580c8bf0ff615b73c45a7ae 616 SUPERFAMILY SSF143975 4 420 4.58E-135 T 01-11-2018 IPR037237 IlvD/EDD, N-terminal domain KEGG: 00290+4.2.1.9|KEGG: 00770+4.2.1.9|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-7111 CDA09_18895 595da2e93580c8bf0ff615b73c45a7ae 616 SUPERFAMILY SSF52016 421 612 1.57E-60 T 01-11-2018 CDA09_18895 595da2e93580c8bf0ff615b73c45a7ae 616 ProSitePatterns PS00887 Dihydroxy-acid and 6-phosphogluconate dehydratases signature 2. 509 520 - T 01-11-2018 IPR020558 Dihydroxy-acid/6-phosphogluconate dehydratase, conserved site GO:0003824 KEGG: 00290+4.2.1.9|KEGG: 00770+4.2.1.9|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-7111 CDA09_18895 595da2e93580c8bf0ff615b73c45a7ae 616 Pfam PF00920 Dehydratase family 34 607 2.2E-220 T 01-11-2018 IPR000581 Dihydroxy-acid/6-phosphogluconate dehydratase GO:0003824 KEGG: 00290+4.2.1.9|KEGG: 00770+4.2.1.9|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-7111 CDA09_18895 595da2e93580c8bf0ff615b73c45a7ae 616 Hamap MF_00012 Dihydroxy-acid dehydratase [ilvD]. 4 610 45.422 T 01-11-2018 IPR004404 Dihydroxy-acid dehydratase GO:0004160|GO:0009082 KEGG: 00290+4.2.1.9|KEGG: 00770+4.2.1.9|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-7111 CDA09_18895 595da2e93580c8bf0ff615b73c45a7ae 616 TIGRFAM TIGR00110 ilvD: dihydroxy-acid dehydratase 18 610 2.7E-255 T 01-11-2018 IPR004404 Dihydroxy-acid dehydratase GO:0004160|GO:0009082 KEGG: 00290+4.2.1.9|KEGG: 00770+4.2.1.9|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-7111 CDA09_18895 595da2e93580c8bf0ff615b73c45a7ae 616 Gene3D G3DSA:3.50.30.80 421 572 4.2E-54 T 01-11-2018 CDA09_13230 0711e6b92e8d9a862f6eaa495928349b 329 SUPERFAMILY SSF56327 161 328 7.1E-56 T 01-11-2018 IPR015955 Lactate dehydrogenase/glycoside hydrolase, family 4, C-terminal GO:0003824|GO:0005975|GO:0016616|GO:0055114 CDA09_13230 0711e6b92e8d9a862f6eaa495928349b 329 PIRSF PIRSF000102 2 328 3.8E-59 T 01-11-2018 IPR001557 L-lactate/malate dehydrogenase GO:0016616|GO:0019752|GO:0055114 CDA09_13230 0711e6b92e8d9a862f6eaa495928349b 329 Gene3D G3DSA:3.40.50.720 1 153 2.9E-57 T 01-11-2018 CDA09_13230 0711e6b92e8d9a862f6eaa495928349b 329 Gene3D G3DSA:3.90.110.10 159 329 1.9E-57 T 01-11-2018 IPR015955 Lactate dehydrogenase/glycoside hydrolase, family 4, C-terminal GO:0003824|GO:0005975|GO:0016616|GO:0055114 CDA09_13230 0711e6b92e8d9a862f6eaa495928349b 329 Pfam PF00056 lactate/malate dehydrogenase, NAD binding domain 6 152 4.4E-36 T 01-11-2018 IPR001236 Lactate/malate dehydrogenase, N-terminal GO:0016491|GO:0055114 CDA09_13230 0711e6b92e8d9a862f6eaa495928349b 329 Pfam PF02866 lactate/malate dehydrogenase, alpha/beta C-terminal domain 161 323 3.1E-29 T 01-11-2018 IPR022383 Lactate/malate dehydrogenase, C-terminal GO:0016616|GO:0055114 CDA09_13230 0711e6b92e8d9a862f6eaa495928349b 329 TIGRFAM TIGR01759 MalateDH-SF1: malate dehydrogenase 4 323 3.6E-137 T 01-11-2018 IPR010945 Malate dehydrogenase, type 2 GO:0006108|GO:0016615|GO:0055114 KEGG: 00020+1.1.1.37|KEGG: 00270+1.1.1.37|KEGG: 00620+1.1.1.37|KEGG: 00630+1.1.1.37|KEGG: 00680+1.1.1.37|KEGG: 00710+1.1.1.37|KEGG: 00720+1.1.1.37|MetaCyc: PWY-1622|MetaCyc: PWY-5392|MetaCyc: PWY-561|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7115|MetaCyc: PWY-7383 CDA09_13230 0711e6b92e8d9a862f6eaa495928349b 329 Hamap MF_01517 Malate dehydrogenase [mdh]. 2 328 53.853 T 01-11-2018 IPR010945 Malate dehydrogenase, type 2 GO:0006108|GO:0016615|GO:0055114 KEGG: 00020+1.1.1.37|KEGG: 00270+1.1.1.37|KEGG: 00620+1.1.1.37|KEGG: 00630+1.1.1.37|KEGG: 00680+1.1.1.37|KEGG: 00710+1.1.1.37|KEGG: 00720+1.1.1.37|MetaCyc: PWY-1622|MetaCyc: PWY-5392|MetaCyc: PWY-561|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7115|MetaCyc: PWY-7383 CDA09_13230 0711e6b92e8d9a862f6eaa495928349b 329 SUPERFAMILY SSF51735 4 159 3.27E-44 T 01-11-2018 IPR036291 NAD(P)-binding domain superfamily CDA09_00680 8ea22809ece4b0cfd144ba7768a3f50f 365 SMART SM00471 172 323 2.1E-7 T 01-11-2018 IPR003607 HD/PDEase domain CDA09_00680 8ea22809ece4b0cfd144ba7768a3f50f 365 SMART SM00448 10 123 9.4E-36 T 01-11-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 CDA09_00680 8ea22809ece4b0cfd144ba7768a3f50f 365 Pfam PF01966 HD domain 177 313 4.2E-17 T 01-11-2018 IPR006674 HD domain CDA09_00680 8ea22809ece4b0cfd144ba7768a3f50f 365 Gene3D G3DSA:3.40.50.2300 10 144 1.4E-36 T 01-11-2018 CDA09_00680 8ea22809ece4b0cfd144ba7768a3f50f 365 Gene3D G3DSA:1.10.3210.10 150 365 5.0E-76 T 01-11-2018 CDA09_00680 8ea22809ece4b0cfd144ba7768a3f50f 365 SUPERFAMILY SSF109604 153 353 4.4E-30 T 01-11-2018 CDA09_00680 8ea22809ece4b0cfd144ba7768a3f50f 365 SUPERFAMILY SSF52172 9 160 2.7E-37 T 01-11-2018 IPR011006 CheY-like superfamily CDA09_00680 8ea22809ece4b0cfd144ba7768a3f50f 365 Pfam PF00072 Response regulator receiver domain 12 123 1.1E-24 T 01-11-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 CDA09_16035 f727bc352599b3ecbf076bcfea0784f7 363 SUPERFAMILY SSF50969 28 357 1.92E-39 T 01-11-2018 IPR011044 Quinoprotein amine dehydrogenase, beta chain-like CDA09_16035 f727bc352599b3ecbf076bcfea0784f7 363 TIGRFAM TIGR03907 QH_beta: quinohemoprotein amine dehydrogenase, beta subunit 26 363 7.4E-153 T 01-11-2018 IPR023879 Quinohemoprotein amine dehydrogenase, beta subunit CDA09_16035 f727bc352599b3ecbf076bcfea0784f7 363 Gene3D G3DSA:2.130.10.10 26 363 6.2E-127 T 01-11-2018 IPR015943 WD40/YVTN repeat-like-containing domain superfamily GO:0005515 CDA09_13100 3aa71101821d53fa7b1efef1ee2834ee 148 TIGRFAM TIGR00086 smpB: SsrA-binding protein 3 145 3.0E-54 T 01-11-2018 IPR000037 SsrA-binding protein GO:0003723 CDA09_13100 3aa71101821d53fa7b1efef1ee2834ee 148 Gene3D G3DSA:2.40.280.10 1 124 2.4E-45 T 01-11-2018 IPR023620 Small protein B CDA09_13100 3aa71101821d53fa7b1efef1ee2834ee 148 ProSitePatterns PS01317 SsrA-binding protein. 21 33 - T 01-11-2018 IPR020081 SsrA-binding protein, conserved site CDA09_13100 3aa71101821d53fa7b1efef1ee2834ee 148 Hamap MF_00023 SsrA-binding protein [smpB]. 1 148 70.104 T 01-11-2018 IPR000037 SsrA-binding protein GO:0003723 CDA09_13100 3aa71101821d53fa7b1efef1ee2834ee 148 ProDom PD004488 SSRA-BINDING RNA-BINDING SMPB SMALL B TMRNA-BINDING SSRA 3D-STRUCTURE HOMOLOG BINDING 3 127 2.0E-57 T 01-11-2018 IPR000037 SsrA-binding protein GO:0003723 CDA09_13100 3aa71101821d53fa7b1efef1ee2834ee 148 Pfam PF01668 SmpB protein 3 145 2.5E-57 T 01-11-2018 IPR000037 SsrA-binding protein GO:0003723 CDA09_13100 3aa71101821d53fa7b1efef1ee2834ee 148 SUPERFAMILY SSF74982 3 127 3.53E-48 T 01-11-2018 IPR023620 Small protein B CDA09_09920 b3214a06b45c1b797a7fe36ad95231b2 386 Gene3D G3DSA:1.10.3290.10 42 280 1.7E-40 T 01-11-2018 IPR036597 Fido-like domain superfamily CDA09_09920 b3214a06b45c1b797a7fe36ad95231b2 386 SUPERFAMILY SSF140931 100 302 8.11E-36 T 01-11-2018 IPR036597 Fido-like domain superfamily CDA09_09920 b3214a06b45c1b797a7fe36ad95231b2 386 Pfam PF13776 Domain of unknown function (DUF4172) 4 85 4.1E-31 T 01-11-2018 IPR025230 Domain of unknown function DUF4172 CDA09_09920 b3214a06b45c1b797a7fe36ad95231b2 386 Pfam PF02661 Fic/DOC family 114 227 7.3E-17 T 01-11-2018 IPR003812 Fido domain CDA09_09920 b3214a06b45c1b797a7fe36ad95231b2 386 Gene3D G3DSA:1.10.10.10 281 381 1.5E-5 T 01-11-2018 IPR036388 Winged helix-like DNA-binding domain superfamily CDA09_17730 6bbb11f838b725cd80f99981e1554ae1 300 PIRSF PIRSF000728 17 299 4.6E-107 T 01-11-2018 IPR004662 Acetylglutamate kinase family GO:0005737 KEGG: 00220+2.7.2.8|MetaCyc: PWY-5154|MetaCyc: PWY-7400 CDA09_17730 6bbb11f838b725cd80f99981e1554ae1 300 Pfam PF00696 Amino acid kinase family 32 276 1.6E-47 T 01-11-2018 IPR001048 Aspartate/glutamate/uridylate kinase Reactome: R-HSA-70614 CDA09_17730 6bbb11f838b725cd80f99981e1554ae1 300 PRINTS PR00474 Glutamate 5-kinase family signature 199 226 1.6E-5 T 01-11-2018 IPR001057 Glutamate/acetylglutamate kinase Reactome: R-HSA-70614 CDA09_17730 6bbb11f838b725cd80f99981e1554ae1 300 PRINTS PR00474 Glutamate 5-kinase family signature 249 269 1.6E-5 T 01-11-2018 IPR001057 Glutamate/acetylglutamate kinase Reactome: R-HSA-70614 CDA09_17730 6bbb11f838b725cd80f99981e1554ae1 300 Gene3D G3DSA:3.40.1160.10 11 299 3.9E-100 T 01-11-2018 IPR036393 Acetylglutamate kinase-like superfamily CDA09_17730 6bbb11f838b725cd80f99981e1554ae1 300 Hamap MF_00082 Acetylglutamate kinase [argB]. 31 292 51.867 T 01-11-2018 IPR037528 Acetylglutamate kinase ArgB GO:0003991|GO:0006526 KEGG: 00220+2.7.2.8|MetaCyc: PWY-5154|MetaCyc: PWY-7400 CDA09_17730 6bbb11f838b725cd80f99981e1554ae1 300 TIGRFAM TIGR00761 argB: acetylglutamate kinase 33 274 2.0E-76 T 01-11-2018 IPR004662 Acetylglutamate kinase family GO:0005737 KEGG: 00220+2.7.2.8|MetaCyc: PWY-5154|MetaCyc: PWY-7400 CDA09_17730 6bbb11f838b725cd80f99981e1554ae1 300 SUPERFAMILY SSF53633 15 299 8.38E-95 T 01-11-2018 IPR036393 Acetylglutamate kinase-like superfamily CDA09_19010 86582149bff7f7ecbccfe7bd42162e71 732 SUPERFAMILY SSF56003 45 248 5.23E-44 T 01-11-2018 IPR037165 Aldehyde oxidase/xanthine dehydrogenase, molybdopterin binding domain superfamily GO:0016491|GO:0055114 CDA09_19010 86582149bff7f7ecbccfe7bd42162e71 732 Gene3D G3DSA:3.30.365.10 321 555 1.2E-62 T 01-11-2018 CDA09_19010 86582149bff7f7ecbccfe7bd42162e71 732 Pfam PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase 51 192 2.6E-14 T 01-11-2018 IPR008274 Aldehyde oxidase/xanthine dehydrogenase, molybdopterin binding GO:0016491|GO:0055114 CDA09_19010 86582149bff7f7ecbccfe7bd42162e71 732 Pfam PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase 595 681 7.0E-16 T 01-11-2018 IPR008274 Aldehyde oxidase/xanthine dehydrogenase, molybdopterin binding GO:0016491|GO:0055114 CDA09_19010 86582149bff7f7ecbccfe7bd42162e71 732 Pfam PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase 318 556 8.6E-31 T 01-11-2018 IPR008274 Aldehyde oxidase/xanthine dehydrogenase, molybdopterin binding GO:0016491|GO:0055114 CDA09_19010 86582149bff7f7ecbccfe7bd42162e71 732 PIRSF PIRSF036389 1 732 6.1E-275 T 01-11-2018 IPR012368 Oxidoreductase molybdopterin-binding subunit, IorB-related CDA09_19010 86582149bff7f7ecbccfe7bd42162e71 732 Gene3D G3DSA:3.90.1170.50 187 269 5.3E-15 T 01-11-2018 CDA09_19010 86582149bff7f7ecbccfe7bd42162e71 732 Gene3D G3DSA:3.30.365.10 47 186 4.7E-22 T 01-11-2018 CDA09_19010 86582149bff7f7ecbccfe7bd42162e71 732 SMART SM01008 215 293 1.6E-24 T 01-11-2018 IPR000674 Aldehyde oxidase/xanthine dehydrogenase, a/b hammerhead CDA09_19010 86582149bff7f7ecbccfe7bd42162e71 732 Gene3D G3DSA:3.30.365.10 579 730 2.4E-40 T 01-11-2018 CDA09_19010 86582149bff7f7ecbccfe7bd42162e71 732 Gene3D G3DSA:3.30.365.10 345 440 1.2E-62 T 01-11-2018 CDA09_19010 86582149bff7f7ecbccfe7bd42162e71 732 SUPERFAMILY SSF56003 317 726 7.33E-123 T 01-11-2018 IPR037165 Aldehyde oxidase/xanthine dehydrogenase, molybdopterin binding domain superfamily GO:0016491|GO:0055114 CDA09_19010 86582149bff7f7ecbccfe7bd42162e71 732 Pfam PF10518 TAT (twin-arginine translocation) pathway signal sequence 7 29 3.4E-6 T 01-11-2018 IPR019546 Twin-arginine translocation pathway, signal sequence, bacterial/archaeal CDA09_16240 4042f9532334439e43986727907f7091 119 Pfam PF03840 Preprotein translocase SecG subunit 8 77 2.8E-22 T 01-11-2018 IPR004692 Preprotein translocase SecG subunit GO:0009306|GO:0015450|GO:0016021 CDA09_16240 4042f9532334439e43986727907f7091 119 TIGRFAM TIGR00810 secG: preprotein translocase, SecG subunit 7 77 9.2E-27 T 01-11-2018 IPR004692 Preprotein translocase SecG subunit GO:0009306|GO:0015450|GO:0016021 CDA09_16240 4042f9532334439e43986727907f7091 119 PRINTS PR01651 Protein-export SecG membrane protein signature 27 41 3.5E-37 T 01-11-2018 IPR004692 Preprotein translocase SecG subunit GO:0009306|GO:0015450|GO:0016021 CDA09_16240 4042f9532334439e43986727907f7091 119 PRINTS PR01651 Protein-export SecG membrane protein signature 7 27 3.5E-37 T 01-11-2018 IPR004692 Preprotein translocase SecG subunit GO:0009306|GO:0015450|GO:0016021 CDA09_16240 4042f9532334439e43986727907f7091 119 PRINTS PR01651 Protein-export SecG membrane protein signature 58 80 3.5E-37 T 01-11-2018 IPR004692 Preprotein translocase SecG subunit GO:0009306|GO:0015450|GO:0016021 CDA09_16240 4042f9532334439e43986727907f7091 119 PRINTS PR01651 Protein-export SecG membrane protein signature 42 58 3.5E-37 T 01-11-2018 IPR004692 Preprotein translocase SecG subunit GO:0009306|GO:0015450|GO:0016021 CDA09_22190 4ba19a6abe7a37306725945e9fe33db3 563 SUPERFAMILY SSF110849 37 140 2.27E-9 T 01-11-2018 IPR036086 ParB/Sulfiredoxin superfamily CDA09_22190 4ba19a6abe7a37306725945e9fe33db3 563 TIGRFAM TIGR03764 ICE_PFGI_1_parB: integrating conjugative element, PFGI_1 class, ParB family protein 28 290 1.2E-120 T 01-11-2018 IPR022304 Integrating conjugative element, PFGI-1, ParB CDA09_07350 096ace071304f09d39bbbe78ae5591ec 603 Pfam PF13180 PDZ domain 496 571 6.4E-9 T 01-11-2018 IPR001478 PDZ domain GO:0005515 CDA09_07350 096ace071304f09d39bbbe78ae5591ec 603 PIRSF PIRSF016493 2 602 6.1E-213 T 01-11-2018 IPR024191 Peptidase M61 CDA09_07350 096ace071304f09d39bbbe78ae5591ec 603 Gene3D G3DSA:2.30.42.10 495 601 5.6E-18 T 01-11-2018 CDA09_07350 096ace071304f09d39bbbe78ae5591ec 603 Gene3D G3DSA:1.10.390.60 190 460 1.9E-108 T 01-11-2018 CDA09_07350 096ace071304f09d39bbbe78ae5591ec 603 Pfam PF05299 M61 glycyl aminopeptidase 283 399 1.1E-47 T 01-11-2018 IPR007963 Peptidase M61, catalytic domain CDA09_07350 096ace071304f09d39bbbe78ae5591ec 603 SUPERFAMILY SSF55486 196 429 1.25E-11 T 01-11-2018 CDA09_07350 096ace071304f09d39bbbe78ae5591ec 603 SUPERFAMILY SSF50156 493 580 3.55E-11 T 01-11-2018 IPR036034 PDZ superfamily GO:0005515 CDA09_07350 096ace071304f09d39bbbe78ae5591ec 603 SMART SM00228 495 564 3.1E-6 T 01-11-2018 IPR001478 PDZ domain GO:0005515 CDA09_07350 096ace071304f09d39bbbe78ae5591ec 603 Gene3D G3DSA:2.60.40.3650 6 187 1.2E-60 T 01-11-2018 CDA09_09625 47ed95ac90d124a5356c50dc47f35698 292 Gene3D G3DSA:3.40.1080.10 10 285 2.1E-68 T 01-11-2018 CDA09_09625 47ed95ac90d124a5356c50dc47f35698 292 SMART SM00882 4 226 3.0E-31 T 01-11-2018 IPR004165 Coenzyme A transferase family I GO:0008410 Reactome: R-HSA-77108 CDA09_09625 47ed95ac90d124a5356c50dc47f35698 292 Gene3D G3DSA:3.30.30.40 115 152 2.1E-68 T 01-11-2018 CDA09_09625 47ed95ac90d124a5356c50dc47f35698 292 Pfam PF01144 Coenzyme A transferase 7 217 2.4E-32 T 01-11-2018 IPR004165 Coenzyme A transferase family I GO:0008410 Reactome: R-HSA-77108 CDA09_09625 47ed95ac90d124a5356c50dc47f35698 292 SUPERFAMILY SSF100950 2 285 5.14E-69 T 01-11-2018 IPR037171 NagB/RpiA transferase-like CDA09_05650 5a76074eb7d86117b0dd081329192697 390 ProSitePatterns PS00072 Acyl-CoA dehydrogenases signature 1. 129 141 - T 01-11-2018 IPR006089 Acyl-CoA dehydrogenase, conserved site GO:0003995|GO:0055114 CDA09_05650 5a76074eb7d86117b0dd081329192697 390 Pfam PF02770 Acyl-CoA dehydrogenase, middle domain 127 222 2.5E-25 T 01-11-2018 IPR006091 Acyl-CoA oxidase/dehydrogenase, central domain GO:0016627|GO:0055114 CDA09_05650 5a76074eb7d86117b0dd081329192697 390 Gene3D G3DSA:2.40.110.10 126 239 4.7E-45 T 01-11-2018 CDA09_05650 5a76074eb7d86117b0dd081329192697 390 SUPERFAMILY SSF47203 233 386 4.51E-42 T 01-11-2018 IPR036250 Acyl-CoA dehydrogenase-like, C-terminal GO:0016627|GO:0055114 CDA09_05650 5a76074eb7d86117b0dd081329192697 390 Gene3D G3DSA:1.10.540.10 2 125 9.5E-47 T 01-11-2018 IPR037069 Acyl-CoA dehydrogenase/oxidase, N-terminal domain superfamily GO:0016627|GO:0050660|GO:0055114 CDA09_05650 5a76074eb7d86117b0dd081329192697 390 ProSitePatterns PS00073 Acyl-CoA dehydrogenases signature 2. 344 363 - T 01-11-2018 IPR006089 Acyl-CoA dehydrogenase, conserved site GO:0003995|GO:0055114 CDA09_05650 5a76074eb7d86117b0dd081329192697 390 Pfam PF00441 Acyl-CoA dehydrogenase, C-terminal domain 234 385 1.7E-38 T 01-11-2018 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal GO:0016627|GO:0055114 CDA09_05650 5a76074eb7d86117b0dd081329192697 390 SUPERFAMILY SSF56645 5 247 1.07E-86 T 01-11-2018 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain superfamily GO:0016627|GO:0055114 CDA09_05650 5a76074eb7d86117b0dd081329192697 390 PIRSF PIRSF016578 139 389 1.8E-9 T 01-11-2018 CDA09_05650 5a76074eb7d86117b0dd081329192697 390 PIRSF PIRSF016578 7 99 3.5E-5 T 01-11-2018 CDA09_05650 5a76074eb7d86117b0dd081329192697 390 Pfam PF02771 Acyl-CoA dehydrogenase, N-terminal domain 13 123 2.4E-37 T 01-11-2018 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal GO:0016627|GO:0050660|GO:0055114 CDA09_05650 5a76074eb7d86117b0dd081329192697 390 Gene3D G3DSA:1.20.140.10 240 389 2.4E-42 T 01-11-2018 CDA09_12275 3f332a91240b075f9edde0741b172755 689 Pfam PF13722 5TM C-terminal transporter carbon starvation CstA 463 591 3.7E-34 T 01-11-2018 IPR025299 CstA, C-terminal domain CDA09_12275 3f332a91240b075f9edde0741b172755 689 Pfam PF02554 Carbon starvation protein CstA 32 408 1.6E-170 T 01-11-2018 IPR003706 CstA, N-terminal domain GO:0009267|GO:0016020 CDA09_12565 924efa855a1a8a26c9ca6739373b5489 557 TIGRFAM TIGR00795 lctP: transporter, lactate permease (LctP) family 5 548 6.7E-160 T 01-11-2018 IPR003804 L-lactate permease GO:0005887|GO:0015129|GO:0015727 CDA09_12565 924efa855a1a8a26c9ca6739373b5489 557 Pfam PF02652 L-lactate permease 15 546 4.4E-159 T 01-11-2018 IPR003804 L-lactate permease GO:0005887|GO:0015129|GO:0015727 CDA09_13870 427bf83c3822838a2100d2a1d551fde2 245 SUPERFAMILY SSF51735 4 244 1.66E-61 T 01-11-2018 IPR036291 NAD(P)-binding domain superfamily CDA09_13870 427bf83c3822838a2100d2a1d551fde2 245 Gene3D G3DSA:3.40.50.720 1 244 4.6E-63 T 01-11-2018 CDA09_13870 427bf83c3822838a2100d2a1d551fde2 245 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 137 165 - T 01-11-2018 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 CDA09_13870 427bf83c3822838a2100d2a1d551fde2 245 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 17 242 1.8E-49 T 01-11-2018 CDA09_13870 427bf83c3822838a2100d2a1d551fde2 245 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 79 90 5.1E-37 T 01-11-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CDA09_13870 427bf83c3822838a2100d2a1d551fde2 245 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 150 169 5.1E-37 T 01-11-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CDA09_13870 427bf83c3822838a2100d2a1d551fde2 245 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 206 226 5.1E-37 T 01-11-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CDA09_13870 427bf83c3822838a2100d2a1d551fde2 245 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 171 188 5.1E-37 T 01-11-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CDA09_13870 427bf83c3822838a2100d2a1d551fde2 245 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 124 140 5.1E-37 T 01-11-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CDA09_13870 427bf83c3822838a2100d2a1d551fde2 245 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 10 27 5.1E-37 T 01-11-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CDA09_17450 4f5c4aa1e3841cd14540ffacecf6a43a 343 SUPERFAMILY SSF55681 92 343 2.4E-76 T 01-11-2018 CDA09_17450 4f5c4aa1e3841cd14540ffacecf6a43a 343 Pfam PF01409 tRNA synthetases class II core domain (F) 92 342 1.1E-97 T 01-11-2018 IPR002319 Phenylalanyl-tRNA synthetase GO:0000049|GO:0004812|GO:0005524|GO:0005737|GO:0043039 KEGG: 00970+6.1.1.20 CDA09_17450 4f5c4aa1e3841cd14540ffacecf6a43a 343 Gene3D G3DSA:3.30.930.10 7 343 4.0E-114 T 01-11-2018 CDA09_17450 4f5c4aa1e3841cd14540ffacecf6a43a 343 Pfam PF02912 Aminoacyl tRNA synthetase class II, N-terminal domain 23 87 1.3E-20 T 01-11-2018 IPR004188 Phenylalanine-tRNA ligase, class II, N-terminal GO:0000166|GO:0004826|GO:0005524|GO:0005737|GO:0006432 KEGG: 00970+6.1.1.20 CDA09_17450 4f5c4aa1e3841cd14540ffacecf6a43a 343 TIGRFAM TIGR00468 pheS: phenylalanine--tRNA ligase, alpha subunit 39 342 7.3E-97 T 01-11-2018 IPR004529 Phenylalanyl-tRNA synthetase, class IIc, alpha subunit GO:0000166|GO:0004826|GO:0005524|GO:0005737|GO:0006432 KEGG: 00970+6.1.1.20|Reactome: R-HSA-379716 CDA09_17450 4f5c4aa1e3841cd14540ffacecf6a43a 343 Hamap MF_00281 Phenylalanine--tRNA ligase alpha subunit [pheS]. 8 342 47.97 T 01-11-2018 IPR022911 Phenylalanine-tRNA ligase alpha chain 1, bacterial GO:0004826 KEGG: 00970+6.1.1.20 CDA09_17450 4f5c4aa1e3841cd14540ffacecf6a43a 343 SUPERFAMILY SSF46589 14 99 2.72E-19 T 01-11-2018 IPR010978 Class I and II aminoacyl-tRNA synthetase, tRNA-binding arm GO:0000166 CDA09_00155 b367317de6da12be5022e717a7d36fdc 407 SUPERFAMILY SSF89796 3 407 2.75E-150 T 01-11-2018 IPR023606 CoA-transferase family III domain superfamily CDA09_00155 b367317de6da12be5022e717a7d36fdc 407 Gene3D G3DSA:3.30.1540.10 243 334 1.7E-149 T 01-11-2018 CDA09_00155 b367317de6da12be5022e717a7d36fdc 407 Pfam PF02515 CoA-transferase family III 5 383 1.7E-138 T 01-11-2018 IPR003673 CoA-transferase family III GO:0003824 CDA09_00155 b367317de6da12be5022e717a7d36fdc 407 Gene3D G3DSA:3.40.50.10540 5 401 1.7E-149 T 01-11-2018 IPR023606 CoA-transferase family III domain superfamily CDA09_04760 196cc383c2f9280dd8bd30bfdd218ad4 203 Pfam PF00355 Rieske [2Fe-2S] domain 122 179 9.1E-13 T 01-11-2018 IPR017941 Rieske [2Fe-2S] iron-sulphur domain GO:0016491|GO:0051537|GO:0055114 CDA09_04760 196cc383c2f9280dd8bd30bfdd218ad4 203 Gene3D G3DSA:2.102.10.10 47 203 8.1E-40 T 01-11-2018 IPR036922 Rieske [2Fe-2S] iron-sulphur domain superfamily GO:0016491|GO:0051537|GO:0055114 CDA09_04760 196cc383c2f9280dd8bd30bfdd218ad4 203 SUPERFAMILY SSF50022 67 197 1.44E-27 T 01-11-2018 IPR036922 Rieske [2Fe-2S] iron-sulphur domain superfamily GO:0016491|GO:0051537|GO:0055114 CDA09_04760 196cc383c2f9280dd8bd30bfdd218ad4 203 PRINTS PR00162 Rieske 2Fe-2S subunit signature 163 175 1.4E-7 T 01-11-2018 IPR005805 Rieske iron-sulphur protein, C-terminal GO:0016020|GO:0055114 CDA09_04760 196cc383c2f9280dd8bd30bfdd218ad4 203 PRINTS PR00162 Rieske 2Fe-2S subunit signature 127 138 1.4E-7 T 01-11-2018 IPR005805 Rieske iron-sulphur protein, C-terminal GO:0016020|GO:0055114 CDA09_04760 196cc383c2f9280dd8bd30bfdd218ad4 203 PRINTS PR00162 Rieske 2Fe-2S subunit signature 149 161 1.4E-7 T 01-11-2018 IPR005805 Rieske iron-sulphur protein, C-terminal GO:0016020|GO:0055114 CDA09_03910 aad8ed634093e66b0ea5ea1979ad975f 454 Hamap MF_00133 Tryptophan synthase beta chain [trpB]. 22 430 38.43 T 01-11-2018 IPR023026 Tryptophan synthase beta chain/beta chain-like GO:0000162|GO:0004834 KEGG: 00260+4.2.1.20|KEGG: 00400+4.2.1.20 CDA09_03910 aad8ed634093e66b0ea5ea1979ad975f 454 ProSitePatterns PS00168 Tryptophan synthase beta chain pyridoxal-phosphate attachment site. 105 119 - T 01-11-2018 IPR006653 Tryptophan synthase, beta chain, conserved site GO:0004834|GO:0006568 KEGG: 00260+4.2.1.20|KEGG: 00400+4.2.1.20 CDA09_03910 aad8ed634093e66b0ea5ea1979ad975f 454 PIRSF PIRSF001413 10 436 2.0E-111 T 01-11-2018 IPR023026 Tryptophan synthase beta chain/beta chain-like GO:0000162|GO:0004834 KEGG: 00260+4.2.1.20|KEGG: 00400+4.2.1.20 CDA09_03910 aad8ed634093e66b0ea5ea1979ad975f 454 Gene3D G3DSA:3.40.50.1100 14 423 1.5E-167 T 01-11-2018 CDA09_03910 aad8ed634093e66b0ea5ea1979ad975f 454 Pfam PF00291 Pyridoxal-phosphate dependent enzyme 77 417 3.7E-43 T 01-11-2018 IPR001926 Pyridoxal-phosphate dependent enzyme CDA09_03910 aad8ed634093e66b0ea5ea1979ad975f 454 Gene3D G3DSA:3.40.50.1100 15 238 1.5E-167 T 01-11-2018 CDA09_03910 aad8ed634093e66b0ea5ea1979ad975f 454 PIRSF PIRSF500824 2 439 8.9E-199 T 01-11-2018 IPR006316 Tryptophan synthase, beta chain-like GO:0000162|GO:0004834|GO:0030170 KEGG: 00260+4.2.1.20|KEGG: 00400+4.2.1.20 CDA09_03910 aad8ed634093e66b0ea5ea1979ad975f 454 TIGRFAM TIGR01415 trpB_rel: pyridoxal-phosphate dependent TrpB-like enzyme 14 430 4.3E-189 T 01-11-2018 IPR006316 Tryptophan synthase, beta chain-like GO:0000162|GO:0004834|GO:0030170 KEGG: 00260+4.2.1.20|KEGG: 00400+4.2.1.20 CDA09_03910 aad8ed634093e66b0ea5ea1979ad975f 454 SUPERFAMILY SSF53686 32 428 9.04E-108 T 01-11-2018 IPR036052 Tryptophan synthase beta subunit-like PLP-dependent enzyme CDA09_19435 de5c6fda46d8e2227dd6d17044c15565 60 SUPERFAMILY SSF55129 4 59 1.14E-21 T 01-11-2018 IPR036919 Ribosomal protein L30, ferredoxin-like fold domain superfamily CDA09_19435 de5c6fda46d8e2227dd6d17044c15565 60 ProSitePatterns PS00634 Ribosomal protein L30 signature. 24 56 - T 01-11-2018 IPR018038 Ribosomal protein L30, conserved site CDA09_19435 de5c6fda46d8e2227dd6d17044c15565 60 Gene3D G3DSA:3.30.1390.20 2 59 1.7E-26 T 01-11-2018 IPR036919 Ribosomal protein L30, ferredoxin-like fold domain superfamily CDA09_19435 de5c6fda46d8e2227dd6d17044c15565 60 Hamap MF_01371_B 50S ribosomal protein L30 [rpmD]. 3 60 21.56 T 01-11-2018 IPR005996 Ribosomal protein L30, bacterial-type GO:0003735|GO:0006412|GO:0015934 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 CDA09_19435 de5c6fda46d8e2227dd6d17044c15565 60 PIRSF PIRSF002211 1 60 1.9E-28 T 01-11-2018 IPR005996 Ribosomal protein L30, bacterial-type GO:0003735|GO:0006412|GO:0015934 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 CDA09_19435 de5c6fda46d8e2227dd6d17044c15565 60 TIGRFAM TIGR01308 rpmD_bact: ribosomal protein uL30 6 59 9.9E-26 T 01-11-2018 IPR005996 Ribosomal protein L30, bacterial-type GO:0003735|GO:0006412|GO:0015934 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 CDA09_19435 de5c6fda46d8e2227dd6d17044c15565 60 Pfam PF00327 Ribosomal protein L30p/L7e 6 56 6.9E-20 T 01-11-2018 IPR016082 Ribosomal protein L30, ferredoxin-like fold domain CDA09_04350 5dbaa0c1a892f0a75e2638d3ce47ec8a 387 Pfam PF13365 Trypsin-like peptidase domain 112 247 3.8E-34 T 01-11-2018 CDA09_04350 5dbaa0c1a892f0a75e2638d3ce47ec8a 387 Gene3D G3DSA:2.30.42.10 281 381 9.3E-25 T 01-11-2018 CDA09_04350 5dbaa0c1a892f0a75e2638d3ce47ec8a 387 TIGRFAM TIGR02037 degP_htrA_DO: peptidase Do 58 380 6.3E-129 T 01-11-2018 IPR011782 Peptidase S1C, Do GO:0004252|GO:0006508 CDA09_04350 5dbaa0c1a892f0a75e2638d3ce47ec8a 387 PRINTS PR00834 HtrA/DegQ protease family signature 183 207 1.3E-55 T 01-11-2018 IPR001940 Peptidase S1C GO:0004252|GO:0006508 CDA09_04350 5dbaa0c1a892f0a75e2638d3ce47ec8a 387 PRINTS PR00834 HtrA/DegQ protease family signature 218 235 1.3E-55 T 01-11-2018 IPR001940 Peptidase S1C GO:0004252|GO:0006508 CDA09_04350 5dbaa0c1a892f0a75e2638d3ce47ec8a 387 PRINTS PR00834 HtrA/DegQ protease family signature 240 257 1.3E-55 T 01-11-2018 IPR001940 Peptidase S1C GO:0004252|GO:0006508 CDA09_04350 5dbaa0c1a892f0a75e2638d3ce47ec8a 387 PRINTS PR00834 HtrA/DegQ protease family signature 326 338 1.3E-55 T 01-11-2018 IPR001940 Peptidase S1C GO:0004252|GO:0006508 CDA09_04350 5dbaa0c1a892f0a75e2638d3ce47ec8a 387 PRINTS PR00834 HtrA/DegQ protease family signature 121 133 1.3E-55 T 01-11-2018 IPR001940 Peptidase S1C GO:0004252|GO:0006508 CDA09_04350 5dbaa0c1a892f0a75e2638d3ce47ec8a 387 PRINTS PR00834 HtrA/DegQ protease family signature 142 162 1.3E-55 T 01-11-2018 IPR001940 Peptidase S1C GO:0004252|GO:0006508 CDA09_04350 5dbaa0c1a892f0a75e2638d3ce47ec8a 387 SUPERFAMILY SSF50494 56 283 1.06E-66 T 01-11-2018 IPR009003 Peptidase S1, PA clan CDA09_04350 5dbaa0c1a892f0a75e2638d3ce47ec8a 387 Pfam PF13180 PDZ domain 286 376 2.3E-12 T 01-11-2018 IPR001478 PDZ domain GO:0005515 CDA09_04350 5dbaa0c1a892f0a75e2638d3ce47ec8a 387 Gene3D G3DSA:2.40.10.120 57 279 6.7E-80 T 01-11-2018 CDA09_04350 5dbaa0c1a892f0a75e2638d3ce47ec8a 387 SMART SM00228 286 368 4.8E-9 T 01-11-2018 IPR001478 PDZ domain GO:0005515 CDA09_04350 5dbaa0c1a892f0a75e2638d3ce47ec8a 387 SUPERFAMILY SSF50156 244 367 1.31E-24 T 01-11-2018 IPR036034 PDZ superfamily GO:0005515 CDA09_14545 46ff7d39bca099052a3f915cf1114e3f 502 SUPERFAMILY SSF55681 160 499 1.51E-117 T 01-11-2018 CDA09_14545 46ff7d39bca099052a3f915cf1114e3f 502 Pfam PF00152 tRNA synthetases class II (D, K and N) 161 499 2.8E-82 T 01-11-2018 IPR004364 Aminoacyl-tRNA synthetase, class II (D/K/N) GO:0000166|GO:0004812|GO:0005524|GO:0006418 CDA09_14545 46ff7d39bca099052a3f915cf1114e3f 502 Hamap MF_00252 Lysine--tRNA ligase [lysS]. 20 502 44.304 T 01-11-2018 IPR002313 Lysine-tRNA ligase, class II GO:0004824|GO:0005524|GO:0006430 KEGG: 00970+6.1.1.6|Reactome: R-HSA-2408517|Reactome: R-HSA-379716|Reactome: R-HSA-379726 CDA09_14545 46ff7d39bca099052a3f915cf1114e3f 502 Gene3D G3DSA:3.30.930.10 156 502 2.4E-127 T 01-11-2018 CDA09_14545 46ff7d39bca099052a3f915cf1114e3f 502 Pfam PF01336 OB-fold nucleic acid binding domain 67 144 8.2E-15 T 01-11-2018 IPR004365 OB-fold nucleic acid binding domain, AA-tRNA synthetase-type GO:0003676 CDA09_14545 46ff7d39bca099052a3f915cf1114e3f 502 SUPERFAMILY SSF50249 13 153 2.14E-43 T 01-11-2018 IPR012340 Nucleic acid-binding, OB-fold CDA09_14545 46ff7d39bca099052a3f915cf1114e3f 502 Gene3D G3DSA:2.40.50.140 14 152 3.7E-41 T 01-11-2018 CDA09_14545 46ff7d39bca099052a3f915cf1114e3f 502 TIGRFAM TIGR00499 lysS_bact: lysine--tRNA ligase 15 500 2.8E-201 T 01-11-2018 IPR002313 Lysine-tRNA ligase, class II GO:0004824|GO:0005524|GO:0006430 KEGG: 00970+6.1.1.6|Reactome: R-HSA-2408517|Reactome: R-HSA-379716|Reactome: R-HSA-379726 CDA09_14545 46ff7d39bca099052a3f915cf1114e3f 502 PRINTS PR00982 Lysyl-tRNA synthetase signature 260 277 1.3E-38 T 01-11-2018 IPR018149 Lysyl-tRNA synthetase, class II, C-terminal GO:0000166|GO:0004824|GO:0005524|GO:0005737|GO:0006430 KEGG: 00970+6.1.1.6|Reactome: R-HSA-2408517|Reactome: R-HSA-379716|Reactome: R-HSA-379726 CDA09_14545 46ff7d39bca099052a3f915cf1114e3f 502 PRINTS PR00982 Lysyl-tRNA synthetase signature 197 207 1.3E-38 T 01-11-2018 IPR018149 Lysyl-tRNA synthetase, class II, C-terminal GO:0000166|GO:0004824|GO:0005524|GO:0005737|GO:0006430 KEGG: 00970+6.1.1.6|Reactome: R-HSA-2408517|Reactome: R-HSA-379716|Reactome: R-HSA-379726 CDA09_14545 46ff7d39bca099052a3f915cf1114e3f 502 PRINTS PR00982 Lysyl-tRNA synthetase signature 213 229 1.3E-38 T 01-11-2018 IPR018149 Lysyl-tRNA synthetase, class II, C-terminal GO:0000166|GO:0004824|GO:0005524|GO:0005737|GO:0006430 KEGG: 00970+6.1.1.6|Reactome: R-HSA-2408517|Reactome: R-HSA-379716|Reactome: R-HSA-379726 CDA09_14545 46ff7d39bca099052a3f915cf1114e3f 502 PRINTS PR00982 Lysyl-tRNA synthetase signature 242 255 1.3E-38 T 01-11-2018 IPR018149 Lysyl-tRNA synthetase, class II, C-terminal GO:0000166|GO:0004824|GO:0005524|GO:0005737|GO:0006430 KEGG: 00970+6.1.1.6|Reactome: R-HSA-2408517|Reactome: R-HSA-379716|Reactome: R-HSA-379726 CDA09_14545 46ff7d39bca099052a3f915cf1114e3f 502 PRINTS PR00982 Lysyl-tRNA synthetase signature 384 400 1.3E-38 T 01-11-2018 IPR018149 Lysyl-tRNA synthetase, class II, C-terminal GO:0000166|GO:0004824|GO:0005524|GO:0005737|GO:0006430 KEGG: 00970+6.1.1.6|Reactome: R-HSA-2408517|Reactome: R-HSA-379716|Reactome: R-HSA-379726 CDA09_18515 4d7dccdac271b4e50d83a17735f66e2f 452 SUPERFAMILY SSF51069 230 449 2.75E-54 T 01-11-2018 IPR036398 Alpha carbonic anhydrase domain superfamily CDA09_18515 4d7dccdac271b4e50d83a17735f66e2f 452 SMART SM01057 231 452 3.3E-59 T 01-11-2018 IPR001148 Alpha carbonic anhydrase domain CDA09_18515 4d7dccdac271b4e50d83a17735f66e2f 452 Gene3D G3DSA:3.10.200.10 228 452 1.5E-54 T 01-11-2018 IPR036398 Alpha carbonic anhydrase domain superfamily CDA09_18515 4d7dccdac271b4e50d83a17735f66e2f 452 Pfam PF00194 Eukaryotic-type carbonic anhydrase 230 450 1.2E-25 T 01-11-2018 IPR001148 Alpha carbonic anhydrase domain CDA09_11205 51a9a73a6b3e2dd3f2f60c9a0109d2c2 691 Pfam PF14574 Domain of unknown function (DUF4445) 210 632 4.0E-132 T 01-11-2018 IPR027980 Protein of unknown function DUF4445 CDA09_11205 51a9a73a6b3e2dd3f2f60c9a0109d2c2 691 Gene3D G3DSA:3.30.420.480 208 389 1.2E-50 T 01-11-2018 CDA09_11205 51a9a73a6b3e2dd3f2f60c9a0109d2c2 691 Pfam PF00111 2Fe-2S iron-sulfur cluster binding domain 10 98 6.2E-8 T 01-11-2018 IPR001041 2Fe-2S ferredoxin-type iron-sulfur binding domain GO:0009055|GO:0051536 CDA09_11205 51a9a73a6b3e2dd3f2f60c9a0109d2c2 691 Gene3D G3DSA:3.10.20.30 2 115 2.0E-18 T 01-11-2018 IPR012675 Beta-grasp domain superfamily CDA09_11205 51a9a73a6b3e2dd3f2f60c9a0109d2c2 691 SUPERFAMILY SSF54292 6 112 1.31E-17 T 01-11-2018 IPR036010 2Fe-2S ferredoxin-like superfamily GO:0009055|GO:0051536 CDA09_11205 51a9a73a6b3e2dd3f2f60c9a0109d2c2 691 Gene3D G3DSA:2.40.50.570 124 207 1.0E-11 T 01-11-2018 CDA09_00125 e84703b90e033b13baff8f89fe2637ee 362 SUPERFAMILY SSF51735 137 303 4.25E-49 T 01-11-2018 IPR036291 NAD(P)-binding domain superfamily CDA09_00125 e84703b90e033b13baff8f89fe2637ee 362 Gene3D G3DSA:3.40.50.720 3 351 2.2E-134 T 01-11-2018 CDA09_00125 e84703b90e033b13baff8f89fe2637ee 362 PIRSF PIRSF000183 1 362 1.4E-145 T 01-11-2018 IPR008141 Alanine dehydrogenase GO:0000286|GO:0042853 KEGG: 00250+1.4.1.1|KEGG: 00430+1.4.1.1 CDA09_00125 e84703b90e033b13baff8f89fe2637ee 362 SMART SM01003 4 137 9.7E-77 T 01-11-2018 IPR007886 Alanine dehydrogenase/pyridine nucleotide transhydrogenase, N-terminal CDA09_00125 e84703b90e033b13baff8f89fe2637ee 362 Pfam PF05222 Alanine dehydrogenase/PNT, N-terminal domain 4 137 1.7E-46 T 01-11-2018 IPR007886 Alanine dehydrogenase/pyridine nucleotide transhydrogenase, N-terminal CDA09_00125 e84703b90e033b13baff8f89fe2637ee 362 ProSitePatterns PS00837 Alanine dehydrogenase & pyridine nucleotide transhydrogenase signature 2. 173 198 - T 01-11-2018 IPR008143 Alanine dehydrogenase/pyridine nucleotide transhydrogenase, conserved site-2 GO:0016491|GO:0055114 KEGG: 00250+1.4.1.1|KEGG: 00430+1.4.1.1|Reactome: R-HSA-71403 CDA09_00125 e84703b90e033b13baff8f89fe2637ee 362 SMART SM01002 149 297 4.9E-81 T 01-11-2018 IPR007698 Alanine dehydrogenase/pyridine nucleotide transhydrogenase, NAD(H)-binding domain CDA09_00125 e84703b90e033b13baff8f89fe2637ee 362 SUPERFAMILY SSF52283 1 359 4.51E-65 T 01-11-2018 CDA09_00125 e84703b90e033b13baff8f89fe2637ee 362 TIGRFAM TIGR00518 alaDH: alanine dehydrogenase 1 360 1.1E-153 T 01-11-2018 IPR008141 Alanine dehydrogenase GO:0000286|GO:0042853 KEGG: 00250+1.4.1.1|KEGG: 00430+1.4.1.1 CDA09_00125 e84703b90e033b13baff8f89fe2637ee 362 Gene3D G3DSA:3.40.50.720 130 305 2.2E-134 T 01-11-2018 CDA09_00125 e84703b90e033b13baff8f89fe2637ee 362 Pfam PF01262 Alanine dehydrogenase/PNT, C-terminal domain 141 351 2.3E-78 T 01-11-2018 IPR007698 Alanine dehydrogenase/pyridine nucleotide transhydrogenase, NAD(H)-binding domain CDA09_06240 245fa4842c842354411599ae6a2b5ada 1024 SUPERFAMILY SSF82714 702 786 3.92E-18 T 01-11-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains CDA09_06240 245fa4842c842354411599ae6a2b5ada 1024 SUPERFAMILY SSF82866 305 493 1.83E-47 T 01-11-2018 CDA09_06240 245fa4842c842354411599ae6a2b5ada 1024 SUPERFAMILY SSF82693 136 326 8.11E-20 T 01-11-2018 CDA09_06240 245fa4842c842354411599ae6a2b5ada 1024 Gene3D G3DSA:1.20.1640.10 10 503 0.0 T 01-11-2018 CDA09_06240 245fa4842c842354411599ae6a2b5ada 1024 Gene3D G3DSA:3.30.2090.10 178 271 0.0 T 01-11-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains CDA09_06240 245fa4842c842354411599ae6a2b5ada 1024 SUPERFAMILY SSF82714 182 266 5.23E-17 T 01-11-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains CDA09_06240 245fa4842c842354411599ae6a2b5ada 1024 Gene3D G3DSA:3.30.70.1430 558 650 0.0 T 01-11-2018 CDA09_06240 245fa4842c842354411599ae6a2b5ada 1024 Gene3D G3DSA:1.20.1640.10 504 1003 0.0 T 01-11-2018 CDA09_06240 245fa4842c842354411599ae6a2b5ada 1024 SUPERFAMILY SSF82866 788 1011 2.88E-49 T 01-11-2018 CDA09_06240 245fa4842c842354411599ae6a2b5ada 1024 Gene3D G3DSA:3.30.2090.10 701 789 0.0 T 01-11-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains CDA09_06240 245fa4842c842354411599ae6a2b5ada 1024 Gene3D G3DSA:3.30.70.1430 40 797 0.0 T 01-11-2018 CDA09_06240 245fa4842c842354411599ae6a2b5ada 1024 Pfam PF00873 AcrB/AcrD/AcrF family 4 1006 9.8E-301 T 01-11-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 CDA09_06240 245fa4842c842354411599ae6a2b5ada 1024 SUPERFAMILY SSF82693 40 134 3.4E-25 T 01-11-2018 CDA09_06240 245fa4842c842354411599ae6a2b5ada 1024 Gene3D G3DSA:3.30.70.1320 134 328 0.0 T 01-11-2018 CDA09_06240 245fa4842c842354411599ae6a2b5ada 1024 PRINTS PR00702 Acriflavin resistance protein family signature 38 56 3.2E-76 T 01-11-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 CDA09_06240 245fa4842c842354411599ae6a2b5ada 1024 PRINTS PR00702 Acriflavin resistance protein family signature 359 380 3.2E-76 T 01-11-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 CDA09_06240 245fa4842c842354411599ae6a2b5ada 1024 PRINTS PR00702 Acriflavin resistance protein family signature 465 488 3.2E-76 T 01-11-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 CDA09_06240 245fa4842c842354411599ae6a2b5ada 1024 PRINTS PR00702 Acriflavin resistance protein family signature 440 463 3.2E-76 T 01-11-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 CDA09_06240 245fa4842c842354411599ae6a2b5ada 1024 PRINTS PR00702 Acriflavin resistance protein family signature 10 34 3.2E-76 T 01-11-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 CDA09_06240 245fa4842c842354411599ae6a2b5ada 1024 PRINTS PR00702 Acriflavin resistance protein family signature 332 355 3.2E-76 T 01-11-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 CDA09_06240 245fa4842c842354411599ae6a2b5ada 1024 PRINTS PR00702 Acriflavin resistance protein family signature 387 411 3.2E-76 T 01-11-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 CDA09_06240 245fa4842c842354411599ae6a2b5ada 1024 PRINTS PR00702 Acriflavin resistance protein family signature 543 560 3.2E-76 T 01-11-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 CDA09_06240 245fa4842c842354411599ae6a2b5ada 1024 PRINTS PR00702 Acriflavin resistance protein family signature 606 620 3.2E-76 T 01-11-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 CDA09_06240 245fa4842c842354411599ae6a2b5ada 1024 Gene3D G3DSA:3.30.70.1440 651 846 0.0 T 01-11-2018 CDA09_06240 245fa4842c842354411599ae6a2b5ada 1024 SUPERFAMILY SSF82693 556 650 3.09E-18 T 01-11-2018 CDA09_21540 3233f926c6c012610d260ac472b66991 653 Gene3D G3DSA:3.40.50.300 10 267 2.9E-57 T 01-11-2018 CDA09_21540 3233f926c6c012610d260ac472b66991 653 Pfam PF00005 ABC transporter 30 175 3.3E-25 T 01-11-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 CDA09_21540 3233f926c6c012610d260ac472b66991 653 SMART SM00382 366 557 7.0E-13 T 01-11-2018 IPR003593 AAA+ ATPase domain CDA09_21540 3233f926c6c012610d260ac472b66991 653 SMART SM00382 37 248 5.9E-7 T 01-11-2018 IPR003593 AAA+ ATPase domain CDA09_21540 3233f926c6c012610d260ac472b66991 653 Pfam PF00005 ABC transporter 358 501 2.8E-26 T 01-11-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 CDA09_21540 3233f926c6c012610d260ac472b66991 653 SUPERFAMILY SSF52540 337 561 5.33E-60 T 01-11-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CDA09_21540 3233f926c6c012610d260ac472b66991 653 SUPERFAMILY SSF52540 11 236 2.33E-55 T 01-11-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CDA09_21540 3233f926c6c012610d260ac472b66991 653 Gene3D G3DSA:3.40.50.300 337 574 1.6E-61 T 01-11-2018 CDA09_21540 3233f926c6c012610d260ac472b66991 653 ProSitePatterns PS00211 ABC transporters family signature. 148 162 - T 01-11-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 CDA09_14295 979fbbb82396264e8450878e66d637e9 491 Hamap MF_00945_B Transcription termination/antitermination protein NusA [nusA]. 2 411 29.324 T 01-11-2018 IPR030842 Transcription termination/antitermination protein NusA, bacterial GO:0006353|GO:0031564 CDA09_14295 979fbbb82396264e8450878e66d637e9 491 Pfam PF08529 NusA N-terminal domain 4 126 1.4E-36 T 01-11-2018 IPR013735 Transcription factor NusA, N-terminal GO:0003700|GO:0031554 CDA09_14295 979fbbb82396264e8450878e66d637e9 491 SUPERFAMILY SSF47794 356 417 1.11E-16 T 01-11-2018 IPR010995 DNA repair Rad51/transcription factor NusA, alpha-helical GO:0000166 Reactome: R-HSA-912446 CDA09_14295 979fbbb82396264e8450878e66d637e9 491 Pfam PF00575 S1 RNA binding domain 136 196 3.8E-5 T 01-11-2018 IPR003029 S1 domain GO:0003676 CDA09_14295 979fbbb82396264e8450878e66d637e9 491 SMART SM00316 135 201 7.3E-8 T 01-11-2018 IPR022967 RNA-binding domain, S1 CDA09_14295 979fbbb82396264e8450878e66d637e9 491 SUPERFAMILY SSF54814 201 278 1.83E-28 T 01-11-2018 IPR009019 K homology domain superfamily, prokaryotic type GO:0003723 CDA09_14295 979fbbb82396264e8450878e66d637e9 491 Gene3D G3DSA:1.10.150.20 354 422 6.3E-28 T 01-11-2018 CDA09_14295 979fbbb82396264e8450878e66d637e9 491 Gene3D G3DSA:1.10.150.20 430 488 1.7E-22 T 01-11-2018 CDA09_14295 979fbbb82396264e8450878e66d637e9 491 Pfam PF14520 Helix-hairpin-helix domain 431 485 4.3E-9 T 01-11-2018 CDA09_14295 979fbbb82396264e8450878e66d637e9 491 Gene3D G3DSA:2.40.50.140 138 199 4.9E-20 T 01-11-2018 CDA09_14295 979fbbb82396264e8450878e66d637e9 491 Gene3D G3DSA:3.30.1480.10 1 131 5.6E-41 T 01-11-2018 IPR036555 NusA, N-terminal domain superfamily GO:0003700|GO:0031554 CDA09_14295 979fbbb82396264e8450878e66d637e9 491 TIGRFAM TIGR01954 nusA_Cterm_rpt: transcription termination factor NusA, C-terminal duplication 439 488 7.8E-17 T 01-11-2018 IPR010214 Transcription termination factor NusA, C-terminal duplication CDA09_14295 979fbbb82396264e8450878e66d637e9 491 TIGRFAM TIGR01954 nusA_Cterm_rpt: transcription termination factor NusA, C-terminal duplication 366 414 3.8E-19 T 01-11-2018 IPR010214 Transcription termination factor NusA, C-terminal duplication CDA09_14295 979fbbb82396264e8450878e66d637e9 491 SUPERFAMILY SSF69705 1 128 2.09E-39 T 01-11-2018 IPR036555 NusA, N-terminal domain superfamily GO:0003700|GO:0031554 CDA09_14295 979fbbb82396264e8450878e66d637e9 491 SUPERFAMILY SSF54814 280 344 2.35E-15 T 01-11-2018 IPR009019 K homology domain superfamily, prokaryotic type GO:0003723 CDA09_14295 979fbbb82396264e8450878e66d637e9 491 Gene3D G3DSA:3.30.300.20 200 278 2.3E-30 T 01-11-2018 IPR015946 K homology domain-like, alpha/beta CDA09_14295 979fbbb82396264e8450878e66d637e9 491 Pfam PF13184 NusA-like KH domain 231 298 9.8E-26 T 01-11-2018 IPR025249 KH domain, NusA-like GO:0003723 CDA09_14295 979fbbb82396264e8450878e66d637e9 491 TIGRFAM TIGR01953 NusA: transcription termination factor NusA 5 343 9.3E-123 T 01-11-2018 IPR010213 Transcription termination factor NusA GO:0003723 CDA09_14295 979fbbb82396264e8450878e66d637e9 491 Gene3D G3DSA:3.30.300.20 279 348 1.6E-24 T 01-11-2018 IPR015946 K homology domain-like, alpha/beta CDA09_14295 979fbbb82396264e8450878e66d637e9 491 SUPERFAMILY SSF50249 134 200 1.06E-16 T 01-11-2018 IPR012340 Nucleic acid-binding, OB-fold CDA09_14295 979fbbb82396264e8450878e66d637e9 491 SUPERFAMILY SSF47794 428 489 1.35E-14 T 01-11-2018 IPR010995 DNA repair Rad51/transcription factor NusA, alpha-helical GO:0000166 Reactome: R-HSA-912446 CDA09_15275 505d55924751415adcab103234927fea 412 SMART SM00825 Beta-ketoacyl synthase 6 408 4.4E-17 T 01-11-2018 IPR020841 Polyketide synthase, beta-ketoacyl synthase domain CDA09_15275 505d55924751415adcab103234927fea 412 Pfam PF00109 Beta-ketoacyl synthase, N-terminal domain 4 247 1.6E-62 T 01-11-2018 IPR014030 Beta-ketoacyl synthase, N-terminal CDA09_15275 505d55924751415adcab103234927fea 412 Gene3D G3DSA:3.40.47.10 257 401 3.2E-56 T 01-11-2018 IPR016039 Thiolase-like GO:0003824 CDA09_15275 505d55924751415adcab103234927fea 412 PIRSF PIRSF000447 1 412 3.1E-192 T 01-11-2018 IPR017568 3-oxoacyl-[acyl-carrier-protein] synthase 2 GO:0006633|GO:0016747 CDA09_15275 505d55924751415adcab103234927fea 412 TIGRFAM TIGR03150 fabF: beta-ketoacyl-acyl-carrier-protein synthase II 4 410 1.0E-203 T 01-11-2018 IPR017568 3-oxoacyl-[acyl-carrier-protein] synthase 2 GO:0006633|GO:0016747 CDA09_15275 505d55924751415adcab103234927fea 412 Pfam PF02801 Beta-ketoacyl synthase, C-terminal domain 255 369 2.2E-39 T 01-11-2018 IPR014031 Beta-ketoacyl synthase, C-terminal CDA09_15275 505d55924751415adcab103234927fea 412 ProSitePatterns PS00606 Beta-ketoacyl synthases active site. 155 171 - T 01-11-2018 IPR018201 Beta-ketoacyl synthase, active site CDA09_15275 505d55924751415adcab103234927fea 412 SUPERFAMILY SSF53901 4 252 3.55E-82 T 01-11-2018 IPR016039 Thiolase-like GO:0003824 CDA09_15275 505d55924751415adcab103234927fea 412 Gene3D G3DSA:3.40.47.10 1 255 1.3E-97 T 01-11-2018 IPR016039 Thiolase-like GO:0003824 CDA09_15275 505d55924751415adcab103234927fea 412 SUPERFAMILY SSF53901 214 411 2.81E-74 T 01-11-2018 IPR016039 Thiolase-like GO:0003824 CDA09_11035 36dd094e613a8cd2b37fd4644c226d67 326 SUPERFAMILY SSF46785 12 96 4.71E-22 T 01-11-2018 IPR036390 Winged helix DNA-binding domain superfamily CDA09_11035 36dd094e613a8cd2b37fd4644c226d67 326 Pfam PF03466 LysR substrate binding domain 104 319 1.2E-23 T 01-11-2018 IPR005119 LysR, substrate-binding CDA09_11035 36dd094e613a8cd2b37fd4644c226d67 326 Gene3D G3DSA:1.10.10.10 14 104 1.9E-24 T 01-11-2018 IPR036388 Winged helix-like DNA-binding domain superfamily CDA09_11035 36dd094e613a8cd2b37fd4644c226d67 326 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 32 43 3.0E-10 T 01-11-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 CDA09_11035 36dd094e613a8cd2b37fd4644c226d67 326 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 43 53 3.0E-10 T 01-11-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 CDA09_11035 36dd094e613a8cd2b37fd4644c226d67 326 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 53 64 3.0E-10 T 01-11-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 CDA09_11035 36dd094e613a8cd2b37fd4644c226d67 326 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 17 75 1.5E-21 T 01-11-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 CDA09_11035 36dd094e613a8cd2b37fd4644c226d67 326 SUPERFAMILY SSF53850 106 319 8.14E-28 T 01-11-2018 CDA09_11035 36dd094e613a8cd2b37fd4644c226d67 326 Gene3D G3DSA:3.40.190.10 178 288 1.7E-32 T 01-11-2018 CDA09_11035 36dd094e613a8cd2b37fd4644c226d67 326 Gene3D G3DSA:3.40.190.10 117 315 1.7E-32 T 01-11-2018 CDA09_02570 48e0c1b8e8a16afb23dc0b9f7bc2bf1a 607 PIRSF PIRSF001589 1 605 7.1E-183 T 01-11-2018 IPR006426 Asparagine synthase, glutamine-hydrolyzing GO:0004066|GO:0006529 KEGG: 00250+6.3.5.4|Reactome: R-HSA-380994|Reactome: R-HSA-70614 CDA09_02570 48e0c1b8e8a16afb23dc0b9f7bc2bf1a 607 TIGRFAM TIGR01536 asn_synth_AEB: asparagine synthase (glutamine-hydrolyzing) 2 521 2.0E-129 T 01-11-2018 IPR006426 Asparagine synthase, glutamine-hydrolyzing GO:0004066|GO:0006529 KEGG: 00250+6.3.5.4|Reactome: R-HSA-380994|Reactome: R-HSA-70614 CDA09_02570 48e0c1b8e8a16afb23dc0b9f7bc2bf1a 607 Pfam PF00733 Asparagine synthase 241 585 1.6E-81 T 01-11-2018 IPR001962 Asparagine synthase GO:0004066|GO:0006529 CDA09_02570 48e0c1b8e8a16afb23dc0b9f7bc2bf1a 607 Pfam PF13537 Glutamine amidotransferase domain 46 164 1.6E-42 T 01-11-2018 IPR017932 Glutamine amidotransferase type 2 domain CDA09_02570 48e0c1b8e8a16afb23dc0b9f7bc2bf1a 607 SUPERFAMILY SSF52402 230 579 1.65E-67 T 01-11-2018 CDA09_02570 48e0c1b8e8a16afb23dc0b9f7bc2bf1a 607 SUPERFAMILY SSF56235 1 221 2.4E-60 T 01-11-2018 IPR029055 Nucleophile aminohydrolases, N-terminal CDA09_02570 48e0c1b8e8a16afb23dc0b9f7bc2bf1a 607 Gene3D G3DSA:3.60.20.10 3 187 7.0E-60 T 01-11-2018 IPR029055 Nucleophile aminohydrolases, N-terminal CDA09_00800 91e2789311934f72799a426b8a745c90 169 SUPERFAMILY SSF55729 1 164 6.0E-33 T 01-11-2018 IPR016181 Acyl-CoA N-acyltransferase CDA09_00800 91e2789311934f72799a426b8a745c90 169 Gene3D G3DSA:3.40.630.30 1 167 2.1E-54 T 01-11-2018 CDA09_00800 91e2789311934f72799a426b8a745c90 169 Pfam PF13420 Acetyltransferase (GNAT) domain 3 155 4.7E-22 T 01-11-2018 CDA09_13955 f5c194a63c415691a12efeb9793f97c3 381 TIGRFAM TIGR03761 ICE_PFL4669: integrating conjugative element protein, PFL_4669 family 116 340 3.6E-38 T 01-11-2018 IPR014996 Integrating conjugative element protein, PFL4669 CDA09_13955 f5c194a63c415691a12efeb9793f97c3 381 Pfam PF08900 Domain of unknown function (DUF1845) 115 340 6.1E-57 T 01-11-2018 IPR014996 Integrating conjugative element protein, PFL4669 CDA09_14815 906e411e6637fd583e07a358cc391395 482 Pfam PF01458 Uncharacterized protein family (UPF0051) 220 453 1.0E-68 T 01-11-2018 IPR000825 SUF system FeS cluster assembly, SufBD GO:0016226 CDA09_14815 906e411e6637fd583e07a358cc391395 482 TIGRFAM TIGR01980 sufB: FeS assembly protein SufB 15 473 8.0E-195 T 01-11-2018 IPR010231 SUF system FeS cluster assembly, SufB GO:0016226 CDA09_14815 906e411e6637fd583e07a358cc391395 482 SUPERFAMILY SSF101960 36 479 1.57E-138 T 01-11-2018 IPR037284 SUF system FeS cluster assembly, SufBD superfamily CDA09_17140 c88273c9e87a64ce5459cc3c7b335126 252 Gene3D G3DSA:3.40.50.720 1 251 7.2E-86 T 01-11-2018 CDA09_17140 c88273c9e87a64ce5459cc3c7b335126 252 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 13 248 3.0E-71 T 01-11-2018 CDA09_17140 c88273c9e87a64ce5459cc3c7b335126 252 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 178 195 6.1E-41 T 01-11-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CDA09_17140 c88273c9e87a64ce5459cc3c7b335126 252 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 8 25 6.1E-41 T 01-11-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CDA09_17140 c88273c9e87a64ce5459cc3c7b335126 252 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 82 93 6.1E-41 T 01-11-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CDA09_17140 c88273c9e87a64ce5459cc3c7b335126 252 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 157 176 6.1E-41 T 01-11-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CDA09_17140 c88273c9e87a64ce5459cc3c7b335126 252 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 130 146 6.1E-41 T 01-11-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CDA09_17140 c88273c9e87a64ce5459cc3c7b335126 252 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 213 233 6.1E-41 T 01-11-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CDA09_17140 c88273c9e87a64ce5459cc3c7b335126 252 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 82 93 1.1E-12 T 01-11-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CDA09_17140 c88273c9e87a64ce5459cc3c7b335126 252 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 157 176 1.1E-12 T 01-11-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CDA09_17140 c88273c9e87a64ce5459cc3c7b335126 252 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 136 144 1.1E-12 T 01-11-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CDA09_17140 c88273c9e87a64ce5459cc3c7b335126 252 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 144 172 - T 01-11-2018 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 CDA09_17140 c88273c9e87a64ce5459cc3c7b335126 252 SUPERFAMILY SSF51735 5 250 9.93E-85 T 01-11-2018 IPR036291 NAD(P)-binding domain superfamily CDA09_10335 92bfe7939b23d2ce4e3525db4e0c8199 345 Gene3D G3DSA:3.20.20.70 4 270 4.1E-85 T 01-11-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 CDA09_10335 92bfe7939b23d2ce4e3525db4e0c8199 345 TIGRFAM TIGR03217 4OH_2_O_val_ald: 4-hydroxy-2-oxovalerate aldolase 6 339 7.8E-169 T 01-11-2018 IPR017629 4-hydroxy-2-oxovalerate aldolase GO:0008701|GO:0019439 KEGG: 00360+4.1.3.39|KEGG: 00362+4.1.3.39|KEGG: 00621+4.1.3.39|KEGG: 00622+4.1.3.39|MetaCyc: PWY-5162 CDA09_10335 92bfe7939b23d2ce4e3525db4e0c8199 345 ProDom PD005364 ALDOLASE 4-HYDROXY-2-OXOVALERATE LYASE PYRUVATE 4.1.3.- PLASMID HMG-COA LYASE-LIKE TRANSFERASE HOA 274 336 2.0E-28 T 01-11-2018 IPR012425 DmpG-like communication GO:0016833|GO:0019439 KEGG: 00360+4.1.3.39|KEGG: 00362+4.1.3.39|KEGG: 00621+4.1.3.39|KEGG: 00622+4.1.3.39|MetaCyc: PWY-5162 CDA09_10335 92bfe7939b23d2ce4e3525db4e0c8199 345 Pfam PF00682 HMGL-like 8 264 4.9E-57 T 01-11-2018 IPR000891 Pyruvate carboxyltransferase GO:0003824 CDA09_10335 92bfe7939b23d2ce4e3525db4e0c8199 345 Pfam PF07836 DmpG-like communication domain 276 337 4.6E-30 T 01-11-2018 IPR012425 DmpG-like communication GO:0016833|GO:0019439 KEGG: 00360+4.1.3.39|KEGG: 00362+4.1.3.39|KEGG: 00621+4.1.3.39|KEGG: 00622+4.1.3.39|MetaCyc: PWY-5162 CDA09_10335 92bfe7939b23d2ce4e3525db4e0c8199 345 SUPERFAMILY SSF89000 290 339 6.28E-16 T 01-11-2018 CDA09_10335 92bfe7939b23d2ce4e3525db4e0c8199 345 Hamap MF_01656 4-hydroxy-2-oxovalerate aldolase [mhpE]. 1 344 214.807 T 01-11-2018 IPR017629 4-hydroxy-2-oxovalerate aldolase GO:0008701|GO:0019439 KEGG: 00360+4.1.3.39|KEGG: 00362+4.1.3.39|KEGG: 00621+4.1.3.39|KEGG: 00622+4.1.3.39|MetaCyc: PWY-5162 CDA09_10335 92bfe7939b23d2ce4e3525db4e0c8199 345 SUPERFAMILY SSF51569 5 276 1.36E-67 T 01-11-2018 CDA09_10335 92bfe7939b23d2ce4e3525db4e0c8199 345 Gene3D G3DSA:1.10.8.60 277 344 5.3E-31 T 01-11-2018 CDA09_08380 373a2ded0d97ff87642202d25cc8c10b 489 Gene3D G3DSA:3.40.50.1980 214 353 8.4E-213 T 01-11-2018 CDA09_08380 373a2ded0d97ff87642202d25cc8c10b 489 TIGRFAM TIGR01282 nifD: nitrogenase molybdenum-iron protein alpha chain 22 487 7.2E-255 T 01-11-2018 IPR005972 Nitrogenase molybdenum-iron protein alpha chain GO:0009399|GO:0016163|GO:0016612|GO:0055114 KEGG: 00625+1.18.6.1|KEGG: 00910+1.18.6.1 CDA09_08380 373a2ded0d97ff87642202d25cc8c10b 489 TIGRFAM TIGR01862 N2-ase-Ialpha: nitrogenase component I, alpha chain 38 481 1.9E-185 T 01-11-2018 IPR010143 Nitrogenase component 1, alpha chain GO:0009399|GO:0016163|GO:0051536|GO:0055114 KEGG: 00625+1.18.6.1|KEGG: 00910+1.18.6.1 CDA09_08380 373a2ded0d97ff87642202d25cc8c10b 489 SUPERFAMILY SSF53807 18 488 2.55E-161 T 01-11-2018 CDA09_08380 373a2ded0d97ff87642202d25cc8c10b 489 Pfam PF00148 Nitrogenase component 1 type Oxidoreductase 70 475 2.5E-108 T 01-11-2018 IPR000510 Nitrogenase/oxidoreductase, component 1 GO:0016491|GO:0055114 CDA09_08380 373a2ded0d97ff87642202d25cc8c10b 489 Gene3D G3DSA:3.40.50.1980 37 482 8.4E-213 T 01-11-2018 CDA09_08380 373a2ded0d97ff87642202d25cc8c10b 489 ProSitePatterns PS00090 Nitrogenases component 1 alpha and beta subunits signature 2. 160 174 - T 01-11-2018 IPR000318 Nitrogenase component 1, conserved site GO:0009399|GO:0016163 CDA09_08380 373a2ded0d97ff87642202d25cc8c10b 489 ProSitePatterns PS00699 Nitrogenases component 1 alpha and beta subunits signature 1. 89 96 - T 01-11-2018 IPR000318 Nitrogenase component 1, conserved site GO:0009399|GO:0016163 CDA09_08380 373a2ded0d97ff87642202d25cc8c10b 489 Gene3D G3DSA:3.40.50.1980 71 213 8.4E-213 T 01-11-2018 CDA09_09195 ef2cdaaaf4045dd0fb64c6b0e74bc5e9 382 SUPERFAMILY SSF47203 227 380 2.58E-57 T 01-11-2018 IPR036250 Acyl-CoA dehydrogenase-like, C-terminal GO:0016627|GO:0055114 CDA09_09195 ef2cdaaaf4045dd0fb64c6b0e74bc5e9 382 Pfam PF02770 Acyl-CoA dehydrogenase, middle domain 122 216 1.4E-30 T 01-11-2018 IPR006091 Acyl-CoA oxidase/dehydrogenase, central domain GO:0016627|GO:0055114 CDA09_09195 ef2cdaaaf4045dd0fb64c6b0e74bc5e9 382 ProSitePatterns PS00072 Acyl-CoA dehydrogenases signature 1. 124 136 - T 01-11-2018 IPR006089 Acyl-CoA dehydrogenase, conserved site GO:0003995|GO:0055114 CDA09_09195 ef2cdaaaf4045dd0fb64c6b0e74bc5e9 382 Gene3D G3DSA:2.40.110.10 121 234 2.9E-46 T 01-11-2018 CDA09_09195 ef2cdaaaf4045dd0fb64c6b0e74bc5e9 382 ProSitePatterns PS00073 Acyl-CoA dehydrogenases signature 2. 338 357 - T 01-11-2018 IPR006089 Acyl-CoA dehydrogenase, conserved site GO:0003995|GO:0055114 CDA09_09195 ef2cdaaaf4045dd0fb64c6b0e74bc5e9 382 Gene3D G3DSA:1.10.540.10 1 120 2.6E-34 T 01-11-2018 IPR037069 Acyl-CoA dehydrogenase/oxidase, N-terminal domain superfamily GO:0016627|GO:0050660|GO:0055114 CDA09_09195 ef2cdaaaf4045dd0fb64c6b0e74bc5e9 382 Gene3D G3DSA:1.20.140.10 235 381 4.8E-55 T 01-11-2018 CDA09_09195 ef2cdaaaf4045dd0fb64c6b0e74bc5e9 382 PIRSF PIRSF016578 4 381 5.5E-21 T 01-11-2018 CDA09_09195 ef2cdaaaf4045dd0fb64c6b0e74bc5e9 382 SUPERFAMILY SSF56645 2 240 4.32E-83 T 01-11-2018 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain superfamily GO:0016627|GO:0055114 CDA09_09195 ef2cdaaaf4045dd0fb64c6b0e74bc5e9 382 Pfam PF00441 Acyl-CoA dehydrogenase, C-terminal domain 229 379 3.7E-47 T 01-11-2018 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal GO:0016627|GO:0055114 CDA09_09195 ef2cdaaaf4045dd0fb64c6b0e74bc5e9 382 Pfam PF02771 Acyl-CoA dehydrogenase, N-terminal domain 6 117 7.1E-29 T 01-11-2018 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal GO:0016627|GO:0050660|GO:0055114 CDA09_21915 27be25cb6f7d4c337e2176bea9d129c3 93 Pfam PF02597 ThiS family 19 93 3.4E-10 T 01-11-2018 IPR003749 Sulfur carrier ThiS/MoaD-like Reactome: R-HSA-947581 CDA09_21915 27be25cb6f7d4c337e2176bea9d129c3 93 SUPERFAMILY SSF54285 8 93 3.36E-14 T 01-11-2018 IPR016155 Molybdopterin synthase/thiamin biosynthesis sulphur carrier, beta-grasp CDA09_21915 27be25cb6f7d4c337e2176bea9d129c3 93 Gene3D G3DSA:3.10.20.30 1 93 2.1E-17 T 01-11-2018 IPR012675 Beta-grasp domain superfamily CDA09_07510 27be25cb6f7d4c337e2176bea9d129c3 93 Pfam PF02597 ThiS family 19 93 3.4E-10 T 01-11-2018 IPR003749 Sulfur carrier ThiS/MoaD-like Reactome: R-HSA-947581 CDA09_07510 27be25cb6f7d4c337e2176bea9d129c3 93 SUPERFAMILY SSF54285 8 93 3.36E-14 T 01-11-2018 IPR016155 Molybdopterin synthase/thiamin biosynthesis sulphur carrier, beta-grasp CDA09_07510 27be25cb6f7d4c337e2176bea9d129c3 93 Gene3D G3DSA:3.10.20.30 1 93 2.1E-17 T 01-11-2018 IPR012675 Beta-grasp domain superfamily CDA09_13050 d63f705cb586909610937d9a9d126b56 1126 Pfam PF13555 P-loop containing region of AAA domain 22 82 6.7E-25 T 01-11-2018 CDA09_13050 d63f705cb586909610937d9a9d126b56 1126 SUPERFAMILY SSF52540 38 1077 5.55E-8 T 01-11-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CDA09_13050 d63f705cb586909610937d9a9d126b56 1126 Gene3D G3DSA:3.40.1140.10 18 197 1.7E-8 T 01-11-2018 CDA09_13050 d63f705cb586909610937d9a9d126b56 1126 Pfam PF13558 Putative exonuclease SbcCD, C subunit 977 1067 5.1E-22 T 01-11-2018 CDA09_09900 faf78ca0d65a5f32861af3bf9d228583 364 Gene3D G3DSA:3.20.20.70 5 360 4.9E-89 T 01-11-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 CDA09_09900 faf78ca0d65a5f32861af3bf9d228583 364 SUPERFAMILY SSF51412 5 349 2.29E-49 T 01-11-2018 CDA09_09900 faf78ca0d65a5f32861af3bf9d228583 364 Pfam PF03060 Nitronate monooxygenase 7 354 4.3E-50 T 01-11-2018 IPR004136 Nitronate monooxygenase GO:0018580|GO:0055114 KEGG: 00910+1.13.12.16|MetaCyc: PWY-723 CDA09_00920 0fea16ea5f090790874fedc00e12ef48 591 Gene3D G3DSA:1.10.1130.10 420 482 8.2E-9 T 01-11-2018 CDA09_00920 0fea16ea5f090790874fedc00e12ef48 591 Gene3D G3DSA:1.20.140.10 483 591 1.4E-9 T 01-11-2018 CDA09_00920 0fea16ea5f090790874fedc00e12ef48 591 Pfam PF02335 Cytochrome c552 421 587 2.5E-15 T 01-11-2018 IPR003321 Cytochrome c552 GO:0006807|GO:0042279|GO:0042597|GO:0055114 KEGG: 00910+1.7.2.2|MetaCyc: PWY-5674 CDA09_00920 0fea16ea5f090790874fedc00e12ef48 591 Pfam PF09699 Doubled CXXCH motif (Paired_CXXCH_1) 386 418 1.7E-6 T 01-11-2018 IPR010177 Doubled CXXCH motif CDA09_00920 0fea16ea5f090790874fedc00e12ef48 591 Pfam PF13435 Cytochrome c554 and c-prime 67 88 0.0023 T 01-11-2018 IPR023155 Cytochrome c-552/4 CDA09_00920 0fea16ea5f090790874fedc00e12ef48 591 Pfam PF13435 Cytochrome c554 and c-prime 228 269 2.5E-4 T 01-11-2018 IPR023155 Cytochrome c-552/4 CDA09_00920 0fea16ea5f090790874fedc00e12ef48 591 Gene3D G3DSA:1.10.1130.10 197 419 1.4E-15 T 01-11-2018 CDA09_00920 0fea16ea5f090790874fedc00e12ef48 591 TIGRFAM TIGR01905 paired_CXXCH_1: doubled CXXCH domain 386 418 1.7E-7 T 01-11-2018 IPR010177 Doubled CXXCH motif CDA09_00920 0fea16ea5f090790874fedc00e12ef48 591 Gene3D G3DSA:1.10.1130.10 58 97 9.4E-7 T 01-11-2018 CDA09_00920 0fea16ea5f090790874fedc00e12ef48 591 SUPERFAMILY SSF48695 61 588 9.06E-44 T 01-11-2018 IPR036280 Multiheme cytochrome superfamily CDA09_03685 21cd45a22fc91c3666b5e6e3540db9f5 70 TIGRFAM TIGR00030 S21p: ribosomal protein bS21 2 59 2.7E-23 T 01-11-2018 IPR001911 Ribosomal protein S21 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 CDA09_03685 21cd45a22fc91c3666b5e6e3540db9f5 70 ProDom PD005521 RIBOSOMAL S21 RIBONUCLEOPROTEIN 30S S21P A SSU SUBUNIT SEQUENCING DIRECT 16 55 2.0E-14 T 01-11-2018 IPR001911 Ribosomal protein S21 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 CDA09_03685 21cd45a22fc91c3666b5e6e3540db9f5 70 ProSitePatterns PS01181 Ribosomal protein S21 signature. 13 25 - T 01-11-2018 IPR018278 Ribosomal protein S21, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 CDA09_03685 21cd45a22fc91c3666b5e6e3540db9f5 70 Hamap MF_00358 30S ribosomal protein S21 [rpsU]. 1 57 21.42 T 01-11-2018 IPR001911 Ribosomal protein S21 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 CDA09_03685 21cd45a22fc91c3666b5e6e3540db9f5 70 Gene3D G3DSA:1.20.5.1150 16 54 1.7E-19 T 01-11-2018 IPR038380 Ribosomal protein S21 superfamily Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 CDA09_03685 21cd45a22fc91c3666b5e6e3540db9f5 70 PRINTS PR00976 Ribosomal protein S21 family signature 5 13 2.4E-15 T 01-11-2018 IPR001911 Ribosomal protein S21 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 CDA09_03685 21cd45a22fc91c3666b5e6e3540db9f5 70 PRINTS PR00976 Ribosomal protein S21 family signature 25 35 2.4E-15 T 01-11-2018 IPR001911 Ribosomal protein S21 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 CDA09_03685 21cd45a22fc91c3666b5e6e3540db9f5 70 PRINTS PR00976 Ribosomal protein S21 family signature 13 22 2.4E-15 T 01-11-2018 IPR001911 Ribosomal protein S21 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 CDA09_03685 21cd45a22fc91c3666b5e6e3540db9f5 70 PRINTS PR00976 Ribosomal protein S21 family signature 37 47 2.4E-15 T 01-11-2018 IPR001911 Ribosomal protein S21 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 CDA09_03685 21cd45a22fc91c3666b5e6e3540db9f5 70 Pfam PF01165 Ribosomal protein S21 4 56 6.1E-20 T 01-11-2018 IPR001911 Ribosomal protein S21 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 CDA09_19790 f5e5b89c10e5ddd8877cd63a2688b212 1092 Gene3D G3DSA:3.20.20.240 556 1088 1.2E-181 T 01-11-2018 CDA09_19790 f5e5b89c10e5ddd8877cd63a2688b212 1092 SUPERFAMILY SSF52242 4 150 1.96E-41 T 01-11-2018 IPR036724 Cobalamin-binding domain superfamily GO:0031419|GO:0046872 Reactome: R-HSA-196741 CDA09_19790 f5e5b89c10e5ddd8877cd63a2688b212 1092 Pfam PF02310 B12 binding domain 20 123 7.9E-10 T 01-11-2018 IPR006158 Cobalamin (vitamin B12)-binding domain GO:0031419|GO:0046872 Reactome: R-HSA-196741 CDA09_19790 f5e5b89c10e5ddd8877cd63a2688b212 1092 Pfam PF03308 ArgK protein 180 475 1.9E-41 T 01-11-2018 CDA09_19790 f5e5b89c10e5ddd8877cd63a2688b212 1092 Gene3D G3DSA:3.40.50.300 208 415 7.0E-60 T 01-11-2018 CDA09_19790 f5e5b89c10e5ddd8877cd63a2688b212 1092 Pfam PF01642 Methylmalonyl-CoA mutase 567 1086 1.2E-142 T 01-11-2018 IPR006099 Methylmalonyl-CoA mutase, alpha/beta chain, catalytic GO:0016866|GO:0031419 Reactome: R-HSA-196741|Reactome: R-HSA-3359475|Reactome: R-HSA-3359478|Reactome: R-HSA-71032 CDA09_19790 f5e5b89c10e5ddd8877cd63a2688b212 1092 SUPERFAMILY SSF52540 134 472 3.82E-59 T 01-11-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CDA09_19790 f5e5b89c10e5ddd8877cd63a2688b212 1092 Gene3D G3DSA:3.40.50.280 14 157 8.0E-57 T 01-11-2018 CDA09_19790 f5e5b89c10e5ddd8877cd63a2688b212 1092 Hamap MF_02050 Fused isobutyryl-CoA mutase [icmF]. 18 1092 16.972 T 01-11-2018 IPR033669 Fused isobutyryl-CoA mutase GO:0003924|GO:0005525|GO:0006637|GO:0031419|GO:0034784|GO:0047727 CDA09_19790 f5e5b89c10e5ddd8877cd63a2688b212 1092 SUPERFAMILY SSF51703 513 1088 2.88E-147 T 01-11-2018 IPR016176 Cobalamin (vitamin B12)-dependent enzyme, catalytic GO:0003824|GO:0031419 Reactome: R-HSA-196741|Reactome: R-HSA-3359475|Reactome: R-HSA-3359478|Reactome: R-HSA-71032 CDA09_05685 a8d1cdc7665b92209f429b9e4df42401 183 Gene3D G3DSA:3.90.79.10 36 181 1.2E-36 T 01-11-2018 CDA09_05685 a8d1cdc7665b92209f429b9e4df42401 183 Pfam PF14803 Nudix N-terminal 2 35 8.0E-17 T 01-11-2018 IPR029401 Nudix hydrolase, N-terminal KEGG: 00230+3.6.1.13|KEGG: 00740+3.6.1.18 CDA09_05685 a8d1cdc7665b92209f429b9e4df42401 183 Pfam PF00293 NUDIX domain 48 104 2.9E-10 T 01-11-2018 IPR000086 NUDIX hydrolase domain GO:0016787 CDA09_05685 a8d1cdc7665b92209f429b9e4df42401 183 SUPERFAMILY SSF55811 2 163 4.2E-37 T 01-11-2018 IPR015797 NUDIX hydrolase-like domain superfamily GO:0016787 CDA09_05685 a8d1cdc7665b92209f429b9e4df42401 183 Gene3D G3DSA:2.20.70.10 1 35 3.9E-18 T 01-11-2018 CDA09_01580 9924ca66992bc1ba961e4de4b8b37e1d 433 SUPERFAMILY SSF51905 1 423 5.05E-56 T 01-11-2018 IPR036188 FAD/NAD(P)-binding domain superfamily CDA09_01580 9924ca66992bc1ba961e4de4b8b37e1d 433 Hamap MF_01202 D-amino acid dehydrogenase [dadA]. 1 411 50.333 T 01-11-2018 IPR023080 D-amino acid dehydrogenase DadA GO:0008718|GO:0019478|GO:0055114 CDA09_01580 9924ca66992bc1ba961e4de4b8b37e1d 433 Gene3D G3DSA:3.30.9.10 134 362 8.5E-56 T 01-11-2018 CDA09_01580 9924ca66992bc1ba961e4de4b8b37e1d 433 Gene3D G3DSA:3.50.50.60 95 405 8.5E-56 T 01-11-2018 IPR036188 FAD/NAD(P)-binding domain superfamily CDA09_01580 9924ca66992bc1ba961e4de4b8b37e1d 433 Gene3D G3DSA:3.50.50.60 1 79 3.5E-12 T 01-11-2018 IPR036188 FAD/NAD(P)-binding domain superfamily CDA09_01580 9924ca66992bc1ba961e4de4b8b37e1d 433 SUPERFAMILY SSF54373 270 360 2.22E-19 T 01-11-2018 CDA09_01580 9924ca66992bc1ba961e4de4b8b37e1d 433 Pfam PF01266 FAD dependent oxidoreductase 3 398 8.9E-72 T 01-11-2018 IPR006076 FAD dependent oxidoreductase GO:0016491|GO:0055114 CDA09_11580 95d7cbb5cba911a38207bba872ac39ff 357 PIRSF PIRSF500210 3 338 5.8E-126 T 01-11-2018 IPR028343 Fructose-1,6-bisphosphatase GO:0042132 KEGG: 00010+3.1.3.11|KEGG: 00030+3.1.3.11|KEGG: 00051+3.1.3.11|KEGG: 00680+3.1.3.11|KEGG: 00710+3.1.3.11|MetaCyc: PWY-5484|Reactome: R-HSA-70263 CDA09_11580 95d7cbb5cba911a38207bba872ac39ff 357 Hamap MF_01855 Fructose-1,6-bisphosphatase class 1 [fbp]. 7 336 45.809 T 01-11-2018 IPR000146 Fructose-1,6-bisphosphatase class 1 GO:0005975|GO:0016791 KEGG: 00010+3.1.3.11|KEGG: 00030+3.1.3.11|KEGG: 00051+3.1.3.11|KEGG: 00680+3.1.3.11|KEGG: 00710+3.1.3.11|MetaCyc: PWY-5484|Reactome: R-HSA-70263 CDA09_11580 95d7cbb5cba911a38207bba872ac39ff 357 SUPERFAMILY SSF56655 2 334 5.24E-110 T 01-11-2018 CDA09_11580 95d7cbb5cba911a38207bba872ac39ff 357 PRINTS PR00115 Fructose-1,6-bisphosphatase signature 69 95 8.2E-65 T 01-11-2018 IPR028343 Fructose-1,6-bisphosphatase GO:0042132 KEGG: 00010+3.1.3.11|KEGG: 00030+3.1.3.11|KEGG: 00051+3.1.3.11|KEGG: 00680+3.1.3.11|KEGG: 00710+3.1.3.11|MetaCyc: PWY-5484|Reactome: R-HSA-70263 CDA09_11580 95d7cbb5cba911a38207bba872ac39ff 357 PRINTS PR00115 Fructose-1,6-bisphosphatase signature 32 59 8.2E-65 T 01-11-2018 IPR028343 Fructose-1,6-bisphosphatase GO:0042132 KEGG: 00010+3.1.3.11|KEGG: 00030+3.1.3.11|KEGG: 00051+3.1.3.11|KEGG: 00680+3.1.3.11|KEGG: 00710+3.1.3.11|MetaCyc: PWY-5484|Reactome: R-HSA-70263 CDA09_11580 95d7cbb5cba911a38207bba872ac39ff 357 PRINTS PR00115 Fructose-1,6-bisphosphatase signature 310 335 8.2E-65 T 01-11-2018 IPR028343 Fructose-1,6-bisphosphatase GO:0042132 KEGG: 00010+3.1.3.11|KEGG: 00030+3.1.3.11|KEGG: 00051+3.1.3.11|KEGG: 00680+3.1.3.11|KEGG: 00710+3.1.3.11|MetaCyc: PWY-5484|Reactome: R-HSA-70263 CDA09_11580 95d7cbb5cba911a38207bba872ac39ff 357 PRINTS PR00115 Fructose-1,6-bisphosphatase signature 182 205 8.2E-65 T 01-11-2018 IPR028343 Fructose-1,6-bisphosphatase GO:0042132 KEGG: 00010+3.1.3.11|KEGG: 00030+3.1.3.11|KEGG: 00051+3.1.3.11|KEGG: 00680+3.1.3.11|KEGG: 00710+3.1.3.11|MetaCyc: PWY-5484|Reactome: R-HSA-70263 CDA09_11580 95d7cbb5cba911a38207bba872ac39ff 357 PRINTS PR00115 Fructose-1,6-bisphosphatase signature 208 235 8.2E-65 T 01-11-2018 IPR028343 Fructose-1,6-bisphosphatase GO:0042132 KEGG: 00010+3.1.3.11|KEGG: 00030+3.1.3.11|KEGG: 00051+3.1.3.11|KEGG: 00680+3.1.3.11|KEGG: 00710+3.1.3.11|MetaCyc: PWY-5484|Reactome: R-HSA-70263 CDA09_11580 95d7cbb5cba911a38207bba872ac39ff 357 PRINTS PR00115 Fructose-1,6-bisphosphatase signature 151 174 8.2E-65 T 01-11-2018 IPR028343 Fructose-1,6-bisphosphatase GO:0042132 KEGG: 00010+3.1.3.11|KEGG: 00030+3.1.3.11|KEGG: 00051+3.1.3.11|KEGG: 00680+3.1.3.11|KEGG: 00710+3.1.3.11|MetaCyc: PWY-5484|Reactome: R-HSA-70263 CDA09_11580 95d7cbb5cba911a38207bba872ac39ff 357 Gene3D G3DSA:3.40.190.80 200 338 1.3E-49 T 01-11-2018 CDA09_11580 95d7cbb5cba911a38207bba872ac39ff 357 Pfam PF00316 Fructose-1-6-bisphosphatase, N-terminal domain 8 197 2.9E-60 T 01-11-2018 IPR033391 Fructose-1-6-bisphosphatase class I, N-terminal KEGG: 00010+3.1.3.11|KEGG: 00030+3.1.3.11|KEGG: 00051+3.1.3.11|KEGG: 00680+3.1.3.11|KEGG: 00710+3.1.3.11|MetaCyc: PWY-5484|Reactome: R-HSA-70263 CDA09_11580 95d7cbb5cba911a38207bba872ac39ff 357 Gene3D G3DSA:3.30.540.10 1 198 1.5E-70 T 01-11-2018 CDA09_11580 95d7cbb5cba911a38207bba872ac39ff 357 ProSitePatterns PS00124 Fructose-1-6-bisphosphatase active site. 276 288 - T 01-11-2018 IPR020548 Fructose-1,6-bisphosphatase, active site GO:0005975|GO:0042578 KEGG: 00010+3.1.3.11|KEGG: 00030+3.1.3.11|KEGG: 00051+3.1.3.11|KEGG: 00680+3.1.3.11|KEGG: 00710+3.1.3.11|MetaCyc: PWY-5484|Reactome: R-HSA-70263 CDA09_11580 95d7cbb5cba911a38207bba872ac39ff 357 PIRSF PIRSF000904 3 340 3.5E-123 T 01-11-2018 IPR000146 Fructose-1,6-bisphosphatase class 1 GO:0005975|GO:0016791 KEGG: 00010+3.1.3.11|KEGG: 00030+3.1.3.11|KEGG: 00051+3.1.3.11|KEGG: 00680+3.1.3.11|KEGG: 00710+3.1.3.11|MetaCyc: PWY-5484|Reactome: R-HSA-70263 CDA09_03200 21619c0d84234b0045ba88e0101850b4 376 Gene3D G3DSA:3.30.70.1400 61 144 1.5E-85 T 01-11-2018 CDA09_03200 21619c0d84234b0045ba88e0101850b4 376 SUPERFAMILY SSF101790 284 375 3.11E-26 T 01-11-2018 IPR029043 Glycine cleavage T-protein/YgfZ, C-terminal CDA09_03200 21619c0d84234b0045ba88e0101850b4 376 TIGRFAM TIGR00528 gcvT: glycine cleavage system T protein 11 370 2.0E-107 T 01-11-2018 IPR006223 Glycine cleavage system T protein GO:0004047|GO:0006546 KEGG: 00260+2.1.2.10|KEGG: 00670+2.1.2.10|Reactome: R-HSA-6783984 CDA09_03200 21619c0d84234b0045ba88e0101850b4 376 Gene3D G3DSA:3.30.1360.120 12 237 1.5E-85 T 01-11-2018 IPR027266 GTP-binding protein TrmE/Glycine cleavage system T protein, domain 1 GO:0005515 CDA09_03200 21619c0d84234b0045ba88e0101850b4 376 SUPERFAMILY SSF103025 9 289 5.18E-86 T 01-11-2018 CDA09_03200 21619c0d84234b0045ba88e0101850b4 376 Gene3D G3DSA:2.40.30.110 288 365 3.0E-30 T 01-11-2018 CDA09_03200 21619c0d84234b0045ba88e0101850b4 376 Pfam PF08669 Glycine cleavage T-protein C-terminal barrel domain 273 364 1.3E-22 T 01-11-2018 IPR013977 Glycine cleavage T-protein, C-terminal barrel domain KEGG: 00260+2.1.2.10|KEGG: 00670+2.1.2.10 CDA09_03200 21619c0d84234b0045ba88e0101850b4 376 Gene3D G3DSA:4.10.1250.10 238 286 1.9E-15 T 01-11-2018 CDA09_03200 21619c0d84234b0045ba88e0101850b4 376 Pfam PF01571 Aminomethyltransferase folate-binding domain 15 260 1.2E-86 T 01-11-2018 IPR006222 Aminomethyltransferase, folate-binding domain CDA09_03200 21619c0d84234b0045ba88e0101850b4 376 PIRSF PIRSF006487 1 376 4.8E-80 T 01-11-2018 IPR028896 Aminomethyltransferase-like KEGG: 00260+2.1.2.10|KEGG: 00670+2.1.2.10|Reactome: R-HSA-6783984 CDA09_11435 96844f9c006b004b8314eff561f7ffc5 262 SUPERFAMILY SSF46689 212 260 3.0E-9 T 01-11-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 CDA09_11435 96844f9c006b004b8314eff561f7ffc5 262 SUPERFAMILY SSF51182 12 185 4.15E-15 T 01-11-2018 IPR011051 RmlC-like cupin domain superfamily CDA09_11435 96844f9c006b004b8314eff561f7ffc5 262 Gene3D G3DSA:2.60.120.10 2 94 3.6E-7 T 01-11-2018 IPR014710 RmlC-like jelly roll fold CDA09_11435 96844f9c006b004b8314eff561f7ffc5 262 ProSitePatterns PS00041 Bacterial regulatory proteins, araC family signature. 213 254 - T 01-11-2018 IPR018062 HTH domain AraC-type, conserved site GO:0003700|GO:0006355|GO:0043565 CDA09_11435 96844f9c006b004b8314eff561f7ffc5 262 Pfam PF02311 AraC-like ligand binding domain 30 144 1.8E-5 T 01-11-2018 IPR003313 AraC-type arabinose-binding/dimerisation domain GO:0006355 CDA09_11435 96844f9c006b004b8314eff561f7ffc5 262 Pfam PF12833 Helix-turn-helix domain 182 259 2.7E-20 T 01-11-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 CDA09_11435 96844f9c006b004b8314eff561f7ffc5 262 SMART SM00342 176 258 1.6E-21 T 01-11-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 CDA09_11435 96844f9c006b004b8314eff561f7ffc5 262 Gene3D G3DSA:1.10.10.60 161 261 1.9E-22 T 01-11-2018 CDA09_18635 b967ed1af0740404c174bbfd4c210f53 96 Pfam PF03692 Putative zinc- or iron-chelating domain 2 57 6.3E-5 T 01-11-2018 IPR005358 Putative zinc- or iron-chelating domain containing protein CDA09_00185 214d47cb2f63f07f526be2c983d65a13 185 SMART SM01185 67 120 3.8E-19 T 01-11-2018 IPR001059 Translation elongation factor P/YeiP, central GO:0003746|GO:0006414 CDA09_00185 214d47cb2f63f07f526be2c983d65a13 185 Gene3D G3DSA:2.40.50.140 64 125 9.3E-21 T 01-11-2018 CDA09_00185 214d47cb2f63f07f526be2c983d65a13 185 SUPERFAMILY SSF50104 1 63 9.63E-17 T 01-11-2018 IPR008991 Translation protein SH3-like domain superfamily CDA09_00185 214d47cb2f63f07f526be2c983d65a13 185 Pfam PF01132 Elongation factor P (EF-P) OB domain 68 120 1.6E-17 T 01-11-2018 IPR001059 Translation elongation factor P/YeiP, central GO:0003746|GO:0006414 CDA09_00185 214d47cb2f63f07f526be2c983d65a13 185 Hamap MF_00141 Elongation factor P [efp]. 1 184 47.589 T 01-11-2018 IPR011768 Translation elongation factor P GO:0003746|GO:0005737|GO:0006414 CDA09_00185 214d47cb2f63f07f526be2c983d65a13 185 SMART SM00841 128 183 3.9E-28 T 01-11-2018 IPR015365 Elongation factor P, C-terminal GO:0005737|GO:0043043 CDA09_00185 214d47cb2f63f07f526be2c983d65a13 185 ProSitePatterns PS01275 Elongation factor P signature. 149 168 - T 01-11-2018 IPR013852 Translation elongation factor P/YeiP, conserved site CDA09_00185 214d47cb2f63f07f526be2c983d65a13 185 PIRSF PIRSF005901 1 185 1.5E-58 T 01-11-2018 IPR020599 Translation elongation factor P/YeiP CDA09_00185 214d47cb2f63f07f526be2c983d65a13 185 Pfam PF08207 Elongation factor P (EF-P) KOW-like domain 3 60 2.8E-19 T 01-11-2018 IPR013185 Translation elongation factor, KOW-like CDA09_00185 214d47cb2f63f07f526be2c983d65a13 185 SUPERFAMILY SSF50249 65 125 1.93E-15 T 01-11-2018 IPR012340 Nucleic acid-binding, OB-fold CDA09_00185 214d47cb2f63f07f526be2c983d65a13 185 SUPERFAMILY SSF50249 128 184 1.42E-17 T 01-11-2018 IPR012340 Nucleic acid-binding, OB-fold CDA09_00185 214d47cb2f63f07f526be2c983d65a13 185 Gene3D G3DSA:2.30.30.30 1 62 4.6E-19 T 01-11-2018 IPR014722 Ribosomal protein L2, domain 2 CDA09_00185 214d47cb2f63f07f526be2c983d65a13 185 Gene3D G3DSA:2.40.50.140 127 185 1.9E-27 T 01-11-2018 CDA09_00185 214d47cb2f63f07f526be2c983d65a13 185 TIGRFAM TIGR00038 efp: translation elongation factor P 3 184 9.8E-66 T 01-11-2018 IPR011768 Translation elongation factor P GO:0003746|GO:0005737|GO:0006414 CDA09_00185 214d47cb2f63f07f526be2c983d65a13 185 Pfam PF09285 Elongation factor P, C-terminal 128 183 4.4E-24 T 01-11-2018 IPR015365 Elongation factor P, C-terminal GO:0005737|GO:0043043 CDA09_06600 0911f2e281dd59df80d098a2a02e0088 452 Gene3D G3DSA:1.10.8.60 327 391 7.4E-20 T 01-11-2018 CDA09_06600 0911f2e281dd59df80d098a2a02e0088 452 Pfam PF02954 Bacterial regulatory protein, Fis family 408 448 1.5E-4 T 01-11-2018 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 CDA09_06600 0911f2e281dd59df80d098a2a02e0088 452 Pfam PF00158 Sigma-54 interaction domain 156 322 1.7E-65 T 01-11-2018 IPR002078 RNA polymerase sigma factor 54 interaction domain GO:0005524|GO:0006355|GO:0008134 CDA09_06600 0911f2e281dd59df80d098a2a02e0088 452 ProSitePatterns PS00676 Sigma-54 interaction domain ATP-binding region B signature. 242 257 - T 01-11-2018 IPR025943 Sigma-54 interaction domain, ATP-binding site 2 CDA09_06600 0911f2e281dd59df80d098a2a02e0088 452 Pfam PF00072 Response regulator receiver domain 17 126 1.5E-26 T 01-11-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 CDA09_06600 0911f2e281dd59df80d098a2a02e0088 452 ProSitePatterns PS00688 Sigma-54 interaction domain C-terminal part signature. 369 378 - T 01-11-2018 IPR025944 Sigma-54 interaction domain, conserved site CDA09_06600 0911f2e281dd59df80d098a2a02e0088 452 ProSitePatterns PS00675 Sigma-54 interaction domain ATP-binding region A signature. 180 193 - T 01-11-2018 IPR025662 Sigma-54 interaction domain, ATP-binding site 1 CDA09_06600 0911f2e281dd59df80d098a2a02e0088 452 Gene3D G3DSA:3.40.50.300 147 326 3.3E-60 T 01-11-2018 CDA09_06600 0911f2e281dd59df80d098a2a02e0088 452 Gene3D G3DSA:1.10.10.60 399 451 6.3E-12 T 01-11-2018 CDA09_06600 0911f2e281dd59df80d098a2a02e0088 452 SUPERFAMILY SSF52540 156 386 2.37E-65 T 01-11-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CDA09_06600 0911f2e281dd59df80d098a2a02e0088 452 Gene3D G3DSA:3.40.50.2300 13 146 2.7E-36 T 01-11-2018 CDA09_06600 0911f2e281dd59df80d098a2a02e0088 452 SMART SM00448 15 126 4.6E-32 T 01-11-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 CDA09_06600 0911f2e281dd59df80d098a2a02e0088 452 SUPERFAMILY SSF46689 398 450 8.06E-8 T 01-11-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 CDA09_06600 0911f2e281dd59df80d098a2a02e0088 452 SMART SM00382 176 319 2.2E-8 T 01-11-2018 IPR003593 AAA+ ATPase domain CDA09_06600 0911f2e281dd59df80d098a2a02e0088 452 SUPERFAMILY SSF52172 15 201 4.41E-43 T 01-11-2018 IPR011006 CheY-like superfamily CDA09_06205 49f89be798c483bb03aaf3aeedaa61a3 173 Pfam PF01288 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK) 16 144 3.5E-36 T 01-11-2018 IPR000550 7,8-Dihydro-6-hydroxymethylpterin-pyrophosphokinase, HPPK GO:0003848|GO:0009396 KEGG: 00790+2.7.6.3|MetaCyc: PWY-6147|MetaCyc: PWY-6148|MetaCyc: PWY-6797|MetaCyc: PWY-7539|MetaCyc: PWY-7852|MetaCyc: PWY-7853 CDA09_06205 49f89be798c483bb03aaf3aeedaa61a3 173 TIGRFAM TIGR01498 folK: 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine diphosphokinase 15 144 3.3E-42 T 01-11-2018 IPR000550 7,8-Dihydro-6-hydroxymethylpterin-pyrophosphokinase, HPPK GO:0003848|GO:0009396 KEGG: 00790+2.7.6.3|MetaCyc: PWY-6147|MetaCyc: PWY-6148|MetaCyc: PWY-6797|MetaCyc: PWY-7539|MetaCyc: PWY-7852|MetaCyc: PWY-7853 CDA09_06205 49f89be798c483bb03aaf3aeedaa61a3 173 SUPERFAMILY SSF55083 14 160 6.93E-51 T 01-11-2018 IPR035907 7,8-Dihydro-6-hydroxymethylpterin-pyrophosphokinase HPPK superfamily KEGG: 00790+2.7.6.3|MetaCyc: PWY-6147|MetaCyc: PWY-6148|MetaCyc: PWY-6797|MetaCyc: PWY-7539|MetaCyc: PWY-7852|MetaCyc: PWY-7853 CDA09_06205 49f89be798c483bb03aaf3aeedaa61a3 173 Gene3D G3DSA:3.30.70.560 12 170 6.3E-54 T 01-11-2018 IPR035907 7,8-Dihydro-6-hydroxymethylpterin-pyrophosphokinase HPPK superfamily KEGG: 00790+2.7.6.3|MetaCyc: PWY-6147|MetaCyc: PWY-6148|MetaCyc: PWY-6797|MetaCyc: PWY-7539|MetaCyc: PWY-7852|MetaCyc: PWY-7853 CDA09_17305 c6a7844e94e0196d2ae1fa02faacdb1c 783 SMART SM00434 34 506 1.9E-218 T 01-11-2018 IPR002205 DNA topoisomerase, type IIA, subunit A/C-terminal GO:0003677|GO:0003918|GO:0005524|GO:0006265 Reactome: R-HSA-4615885 CDA09_17305 c6a7844e94e0196d2ae1fa02faacdb1c 783 Gene3D G3DSA:1.10.268.10 414 499 3.9E-185 T 01-11-2018 IPR013757 Type IIA DNA topoisomerase subunit A, alpha-helical domain superfamily GO:0003677|GO:0003918|GO:0005524 Reactome: R-HSA-4615885 CDA09_17305 c6a7844e94e0196d2ae1fa02faacdb1c 783 SUPERFAMILY SSF101904 544 771 1.57E-45 T 01-11-2018 IPR035516 DNA gyrase/topoisomerase IV, subunit A, C-terminal CDA09_17305 c6a7844e94e0196d2ae1fa02faacdb1c 783 Pfam PF00521 DNA gyrase/topoisomerase IV, subunit A 55 510 8.7E-130 T 01-11-2018 IPR002205 DNA topoisomerase, type IIA, subunit A/C-terminal GO:0003677|GO:0003918|GO:0005524|GO:0006265 Reactome: R-HSA-4615885 CDA09_17305 c6a7844e94e0196d2ae1fa02faacdb1c 783 Gene3D G3DSA:3.90.199.10 55 528 3.9E-185 T 01-11-2018 IPR013758 DNA topoisomerase, type IIA, subunit A/ C-terminal, alpha-beta GO:0003677|GO:0003918|GO:0005524|GO:0006259|GO:0006265 Reactome: R-HSA-4615885 CDA09_17305 c6a7844e94e0196d2ae1fa02faacdb1c 783 Gene3D G3DSA:2.120.10.90 542 776 1.4E-22 T 01-11-2018 IPR035516 DNA gyrase/topoisomerase IV, subunit A, C-terminal CDA09_17305 c6a7844e94e0196d2ae1fa02faacdb1c 783 TIGRFAM TIGR01062 parC_Gneg: DNA topoisomerase IV, A subunit 34 771 5.8E-244 T 01-11-2018 CDA09_17305 c6a7844e94e0196d2ae1fa02faacdb1c 783 Pfam PF03989 DNA gyrase C-terminal domain, beta-propeller 641 676 8.0 T 01-11-2018 IPR006691 DNA gyrase/topoisomerase IV, subunit A, C-terminal repeat GO:0003677|GO:0003916|GO:0005524|GO:0005694|GO:0006265 CDA09_17305 c6a7844e94e0196d2ae1fa02faacdb1c 783 Pfam PF03989 DNA gyrase C-terminal domain, beta-propeller 689 729 0.0082 T 01-11-2018 IPR006691 DNA gyrase/topoisomerase IV, subunit A, C-terminal repeat GO:0003677|GO:0003916|GO:0005524|GO:0005694|GO:0006265 CDA09_17305 c6a7844e94e0196d2ae1fa02faacdb1c 783 SUPERFAMILY SSF56719 54 528 3.92E-149 T 01-11-2018 IPR013760 DNA topoisomerase, type IIA-like domain superfamily GO:0003918|GO:0005524 Reactome: R-HSA-4615885 CDA09_17305 c6a7844e94e0196d2ae1fa02faacdb1c 783 Gene3D G3DSA:3.30.1360.40 260 376 3.9E-185 T 01-11-2018 CDA09_17305 c6a7844e94e0196d2ae1fa02faacdb1c 783 Hamap MF_00936 DNA topoisomerase 4 subunit A [parC]. 27 783 33.295 T 01-11-2018 IPR005742 DNA topoisomerase IV, subunit A, Gram-negative GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 CDA09_12250 a925e916e5a4afbf7caef78fceb0b913 275 Gene3D G3DSA:3.40.50.300 3 272 3.1E-61 T 01-11-2018 CDA09_12250 a925e916e5a4afbf7caef78fceb0b913 275 Pfam PF00005 ABC transporter 22 190 2.5E-27 T 01-11-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 CDA09_12250 a925e916e5a4afbf7caef78fceb0b913 275 SMART SM00382 30 240 4.2E-8 T 01-11-2018 IPR003593 AAA+ ATPase domain CDA09_12250 a925e916e5a4afbf7caef78fceb0b913 275 SUPERFAMILY SSF52540 5 263 6.2E-60 T 01-11-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CDA09_12250 a925e916e5a4afbf7caef78fceb0b913 275 Pfam PF12399 Branched-chain amino acid ATP-binding cassette transporter 240 262 3.4E-14 T 01-11-2018 IPR032823 Branched-chain amino acid ATP-binding cassette transporter, C-terminal CDA09_10455 283a4f1fcda1df582132b03b1ae0d394 304 Pfam PF01118 Semialdehyde dehydrogenase, NAD binding domain 5 118 1.7E-11 T 01-11-2018 IPR000534 Semialdehyde dehydrogenase, NAD-binding GO:0016620|GO:0051287|GO:0055114 CDA09_10455 283a4f1fcda1df582132b03b1ae0d394 304 Pfam PF09290 Prokaryotic acetaldehyde dehydrogenase, dimerisation 130 267 2.2E-61 T 01-11-2018 IPR015426 Acetaldehyde dehydrogenase, C-terminal GO:0008774|GO:0019439|GO:0055114 KEGG: 00360+1.2.1.10|KEGG: 00362+1.2.1.10|KEGG: 00620+1.2.1.10|KEGG: 00621+1.2.1.10|KEGG: 00622+1.2.1.10|KEGG: 00650+1.2.1.10|MetaCyc: PWY-5162|MetaCyc: PWY-5436|MetaCyc: PWY-5480|MetaCyc: PWY-6587|MetaCyc: PWY-7085|MetaCyc: PWY-7180 CDA09_10455 283a4f1fcda1df582132b03b1ae0d394 304 PIRSF PIRSF015689 1 299 1.8E-136 T 01-11-2018 IPR003361 Acetaldehyde dehydrogenase GO:0008774|GO:0019439|GO:0055114 KEGG: 00360+1.2.1.10|KEGG: 00362+1.2.1.10|KEGG: 00620+1.2.1.10|KEGG: 00621+1.2.1.10|KEGG: 00622+1.2.1.10|KEGG: 00650+1.2.1.10|MetaCyc: PWY-5162|MetaCyc: PWY-5436|MetaCyc: PWY-5480|MetaCyc: PWY-6587|MetaCyc: PWY-7085|MetaCyc: PWY-7180 CDA09_10455 283a4f1fcda1df582132b03b1ae0d394 304 TIGRFAM TIGR03215 ac_ald_DH_ac: acetaldehyde dehydrogenase (acetylating) 3 292 2.4E-140 T 01-11-2018 IPR003361 Acetaldehyde dehydrogenase GO:0008774|GO:0019439|GO:0055114 KEGG: 00360+1.2.1.10|KEGG: 00362+1.2.1.10|KEGG: 00620+1.2.1.10|KEGG: 00621+1.2.1.10|KEGG: 00622+1.2.1.10|KEGG: 00650+1.2.1.10|MetaCyc: PWY-5162|MetaCyc: PWY-5436|MetaCyc: PWY-5480|MetaCyc: PWY-6587|MetaCyc: PWY-7085|MetaCyc: PWY-7180 CDA09_10455 283a4f1fcda1df582132b03b1ae0d394 304 SUPERFAMILY SSF55347 130 268 1.44E-56 T 01-11-2018 CDA09_10455 283a4f1fcda1df582132b03b1ae0d394 304 SMART SM00859 5 120 1.1E-5 T 01-11-2018 IPR000534 Semialdehyde dehydrogenase, NAD-binding GO:0016620|GO:0051287|GO:0055114 CDA09_10455 283a4f1fcda1df582132b03b1ae0d394 304 Hamap MF_01657 Acetaldehyde dehydrogenase [mhpF]. 1 304 143.429 T 01-11-2018 IPR003361 Acetaldehyde dehydrogenase GO:0008774|GO:0019439|GO:0055114 KEGG: 00360+1.2.1.10|KEGG: 00362+1.2.1.10|KEGG: 00620+1.2.1.10|KEGG: 00621+1.2.1.10|KEGG: 00622+1.2.1.10|KEGG: 00650+1.2.1.10|MetaCyc: PWY-5162|MetaCyc: PWY-5436|MetaCyc: PWY-5480|MetaCyc: PWY-6587|MetaCyc: PWY-7085|MetaCyc: PWY-7180 CDA09_10455 283a4f1fcda1df582132b03b1ae0d394 304 SUPERFAMILY SSF51735 1 154 5.09E-29 T 01-11-2018 IPR036291 NAD(P)-binding domain superfamily CDA09_10455 283a4f1fcda1df582132b03b1ae0d394 304 Gene3D G3DSA:3.40.50.720 5 286 6.8E-122 T 01-11-2018 CDA09_10455 283a4f1fcda1df582132b03b1ae0d394 304 Gene3D G3DSA:3.30.360.10 130 267 6.8E-122 T 01-11-2018 CDA09_07805 15fdd8c4456fbb46fd10e9d589ad72b9 121 Pfam PF01844 HNH endonuclease 39 87 5.0E-11 T 01-11-2018 IPR002711 HNH endonuclease GO:0003676|GO:0004519 CDA09_07805 15fdd8c4456fbb46fd10e9d589ad72b9 121 SMART SM00507 27 82 8.9E-5 T 01-11-2018 IPR003615 HNH nuclease CDA09_11175 10b3992da2fcbe8092e3b61c39c03190 304 SUPERFAMILY SSF53850 96 301 3.26E-41 T 01-11-2018 CDA09_11175 10b3992da2fcbe8092e3b61c39c03190 304 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 36 46 1.3E-9 T 01-11-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 CDA09_11175 10b3992da2fcbe8092e3b61c39c03190 304 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 46 57 1.3E-9 T 01-11-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 CDA09_11175 10b3992da2fcbe8092e3b61c39c03190 304 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 25 36 1.3E-9 T 01-11-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 CDA09_11175 10b3992da2fcbe8092e3b61c39c03190 304 Gene3D G3DSA:3.40.190.10 106 294 5.8E-52 T 01-11-2018 CDA09_11175 10b3992da2fcbe8092e3b61c39c03190 304 Gene3D G3DSA:1.10.10.10 9 99 1.8E-22 T 01-11-2018 IPR036388 Winged helix-like DNA-binding domain superfamily CDA09_11175 10b3992da2fcbe8092e3b61c39c03190 304 Pfam PF03466 LysR substrate binding domain 95 297 8.5E-39 T 01-11-2018 IPR005119 LysR, substrate-binding CDA09_11175 10b3992da2fcbe8092e3b61c39c03190 304 SUPERFAMILY SSF46785 8 116 2.4E-21 T 01-11-2018 IPR036390 Winged helix DNA-binding domain superfamily CDA09_11175 10b3992da2fcbe8092e3b61c39c03190 304 Gene3D G3DSA:3.40.190.10 165 267 5.8E-52 T 01-11-2018 CDA09_11175 10b3992da2fcbe8092e3b61c39c03190 304 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 11 69 7.1E-20 T 01-11-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 CDA09_21560 d9d24a50e02e1dadd77324582be8076c 359 Gene3D G3DSA:2.40.30.170 49 281 5.9E-64 T 01-11-2018 CDA09_21560 d9d24a50e02e1dadd77324582be8076c 359 Pfam PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion 52 274 1.0E-19 T 01-11-2018 IPR032317 RND efflux pump, membrane fusion protein, barrel-sandwich domain CDA09_21560 d9d24a50e02e1dadd77324582be8076c 359 Gene3D G3DSA:2.40.420.20 40 340 5.9E-64 T 01-11-2018 CDA09_21560 d9d24a50e02e1dadd77324582be8076c 359 Gene3D G3DSA:1.10.287.470 97 169 5.9E-64 T 01-11-2018 CDA09_21560 d9d24a50e02e1dadd77324582be8076c 359 Gene3D G3DSA:2.40.50.100 63 203 5.9E-64 T 01-11-2018 CDA09_21560 d9d24a50e02e1dadd77324582be8076c 359 TIGRFAM TIGR01730 RND_mfp: efflux transporter, RND family, MFP subunit 45 354 1.2E-59 T 01-11-2018 IPR006143 RND efflux pump, membrane fusion protein GO:0005215|GO:0016020|GO:0055085 CDA09_21560 d9d24a50e02e1dadd77324582be8076c 359 SUPERFAMILY SSF111369 52 280 1.7E-21 T 01-11-2018 CDA09_04410 9d5ad99e58a284e58f5b837752fd01c9 266 SUPERFAMILY SSF48452 48 196 1.27E-16 T 01-11-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 CDA09_04410 9d5ad99e58a284e58f5b837752fd01c9 266 SMART SM00028 83 116 1.2E-4 T 01-11-2018 IPR019734 Tetratricopeptide repeat GO:0005515 CDA09_04410 9d5ad99e58a284e58f5b837752fd01c9 266 SMART SM00028 49 82 110.0 T 01-11-2018 IPR019734 Tetratricopeptide repeat GO:0005515 CDA09_04410 9d5ad99e58a284e58f5b837752fd01c9 266 SMART SM00028 153 186 0.24 T 01-11-2018 IPR019734 Tetratricopeptide repeat GO:0005515 CDA09_04410 9d5ad99e58a284e58f5b837752fd01c9 266 TIGRFAM TIGR02521 type_IV_pilW: type IV pilus biogenesis/stability protein PilW 12 251 1.5E-58 T 01-11-2018 IPR013360 Pilus biogenesis/stability type IV, PilW CDA09_04410 9d5ad99e58a284e58f5b837752fd01c9 266 Gene3D G3DSA:1.25.40.10 44 264 2.1E-41 T 01-11-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 CDA09_04410 9d5ad99e58a284e58f5b837752fd01c9 266 Pfam PF13181 Tetratricopeptide repeat 83 116 1.3E-5 T 01-11-2018 IPR019734 Tetratricopeptide repeat GO:0005515 CDA09_04410 9d5ad99e58a284e58f5b837752fd01c9 266 Pfam PF13181 Tetratricopeptide repeat 155 186 0.0034 T 01-11-2018 IPR019734 Tetratricopeptide repeat GO:0005515 CDA09_18770 7f5be813a2feb65235d68a583dc077fe 234 TIGRFAM TIGR00044 TIGR00044: pyridoxal phosphate enzyme, YggS family 1 226 1.1E-72 T 01-11-2018 IPR011078 Pyridoxal phosphate homeostasis protein GO:0030170 CDA09_18770 7f5be813a2feb65235d68a583dc077fe 234 PIRSF PIRSF004848 1 231 5.3E-74 T 01-11-2018 IPR011078 Pyridoxal phosphate homeostasis protein GO:0030170 CDA09_18770 7f5be813a2feb65235d68a583dc077fe 234 Pfam PF01168 Alanine racemase, N-terminal domain 7 226 7.3E-31 T 01-11-2018 IPR001608 Alanine racemase, N-terminal KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 CDA09_18770 7f5be813a2feb65235d68a583dc077fe 234 SUPERFAMILY SSF51419 1 224 4.32E-82 T 01-11-2018 IPR029066 PLP-binding barrel CDA09_18770 7f5be813a2feb65235d68a583dc077fe 234 Gene3D G3DSA:3.20.20.10 1 231 1.5E-89 T 01-11-2018 IPR029066 PLP-binding barrel CDA09_18770 7f5be813a2feb65235d68a583dc077fe 234 Hamap MF_02087 Pyridoxal phosphate homeostasis protein. 6 225 32.331 T 01-11-2018 IPR011078 Pyridoxal phosphate homeostasis protein GO:0030170 CDA09_18770 7f5be813a2feb65235d68a583dc077fe 234 ProSitePatterns PS01211 Uncharacterized protein family UPF0001 signature. 76 90 - T 01-11-2018 IPR011078 Pyridoxal phosphate homeostasis protein GO:0030170 CDA09_07605 ac5975a3590e159802f199eb8a4b7189 616 SMART SM00388 393 461 2.8E-9 T 01-11-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 CDA09_07605 ac5975a3590e159802f199eb8a4b7189 616 SUPERFAMILY SSF103190 50 187 8.11E-17 T 01-11-2018 IPR029151 Periplasmic sensor-like domain superfamily CDA09_07605 ac5975a3590e159802f199eb8a4b7189 616 PRINTS PR00344 Bacterial sensor protein C-terminal signature 574 592 6.1E-16 T 01-11-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 CDA09_07605 ac5975a3590e159802f199eb8a4b7189 616 PRINTS PR00344 Bacterial sensor protein C-terminal signature 561 571 6.1E-16 T 01-11-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 CDA09_07605 ac5975a3590e159802f199eb8a4b7189 616 PRINTS PR00344 Bacterial sensor protein C-terminal signature 543 557 6.1E-16 T 01-11-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 CDA09_07605 ac5975a3590e159802f199eb8a4b7189 616 PRINTS PR00344 Bacterial sensor protein C-terminal signature 598 611 6.1E-16 T 01-11-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 CDA09_07605 ac5975a3590e159802f199eb8a4b7189 616 Pfam PF02743 Cache domain 40 290 1.2E-12 T 01-11-2018 IPR033479 Double Cache domain 1 CDA09_07605 ac5975a3590e159802f199eb8a4b7189 616 Pfam PF00512 His Kinase A (phospho-acceptor) domain 395 461 1.1E-9 T 01-11-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 CDA09_07605 ac5975a3590e159802f199eb8a4b7189 616 SUPERFAMILY SSF47384 380 462 5.3E-11 T 01-11-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 CDA09_07605 ac5975a3590e159802f199eb8a4b7189 616 Gene3D G3DSA:3.30.565.10 460 615 1.1E-39 T 01-11-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily CDA09_07605 ac5975a3590e159802f199eb8a4b7189 616 SUPERFAMILY SSF55874 452 612 6.16E-40 T 01-11-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily CDA09_07605 ac5975a3590e159802f199eb8a4b7189 616 Gene3D G3DSA:3.30.450.20 179 297 6.4E-31 T 01-11-2018 CDA09_07605 ac5975a3590e159802f199eb8a4b7189 616 Gene3D G3DSA:3.30.450.20 55 176 6.1E-40 T 01-11-2018 CDA09_07605 ac5975a3590e159802f199eb8a4b7189 616 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 505 613 1.0E-18 T 01-11-2018 IPR003594 Histidine kinase/HSP90-like ATPase CDA09_07605 ac5975a3590e159802f199eb8a4b7189 616 Gene3D G3DSA:1.10.287.130 369 456 2.1E-18 T 01-11-2018 CDA09_07605 ac5975a3590e159802f199eb8a4b7189 616 SMART SM00387 504 614 1.5E-30 T 01-11-2018 IPR003594 Histidine kinase/HSP90-like ATPase CDA09_07605 ac5975a3590e159802f199eb8a4b7189 616 PIRSF PIRSF036431 1 616 7.1E-213 T 01-11-2018 IPR017055 Signal transduction histidine kinase, DctB (C4-dicarboxylate transport system regulator) CDA09_04425 98ee35367dbdadd253e4840cb6e47135 438 SUPERFAMILY SSF55681 12 323 1.1E-102 T 01-11-2018 CDA09_04425 98ee35367dbdadd253e4840cb6e47135 438 Hamap MF_00127 Histidine--tRNA ligase [hisS]. 9 425 31.945 T 01-11-2018 IPR015807 Histidine-tRNA ligase GO:0004821|GO:0005524|GO:0006427 KEGG: 00970+6.1.1.21 CDA09_04425 98ee35367dbdadd253e4840cb6e47135 438 PIRSF PIRSF001549 8 426 3.3E-113 T 01-11-2018 IPR004516 Histidine-tRNA ligase/ATP phosphoribosyltransferase regulatory subunit GO:0005737 CDA09_04425 98ee35367dbdadd253e4840cb6e47135 438 Pfam PF13393 Histidyl-tRNA synthetase 16 318 1.2E-48 T 01-11-2018 CDA09_04425 98ee35367dbdadd253e4840cb6e47135 438 SUPERFAMILY SSF52954 332 427 2.94E-21 T 01-11-2018 CDA09_04425 98ee35367dbdadd253e4840cb6e47135 438 TIGRFAM TIGR00442 hisS: histidine--tRNA ligase 12 414 1.2E-152 T 01-11-2018 IPR015807 Histidine-tRNA ligase GO:0004821|GO:0005524|GO:0006427 KEGG: 00970+6.1.1.21 CDA09_04425 98ee35367dbdadd253e4840cb6e47135 438 Pfam PF03129 Anticodon binding domain 335 424 9.3E-8 T 01-11-2018 IPR004154 Anticodon-binding CDA09_04425 98ee35367dbdadd253e4840cb6e47135 438 Gene3D G3DSA:3.40.50.800 330 423 2.3E-21 T 01-11-2018 IPR036621 Anticodon-binding domain superfamily CDA09_04425 98ee35367dbdadd253e4840cb6e47135 438 Gene3D G3DSA:3.30.930.10 8 326 7.1E-120 T 01-11-2018 CDA09_21890 bfcb1e1aa85d9a777710c69f22b2456d 864 Pfam PF01228 Glycine radical 735 834 1.1E-21 T 01-11-2018 IPR001150 Glycine radical domain GO:0003824 CDA09_21890 bfcb1e1aa85d9a777710c69f22b2456d 864 Gene3D G3DSA:3.20.70.40 53 852 3.1E-223 T 01-11-2018 CDA09_21890 bfcb1e1aa85d9a777710c69f22b2456d 864 ProSitePatterns PS00850 Glycine radical domain signature. 823 831 - T 01-11-2018 IPR019777 Formate C-acetyltransferase glycine radical, conserved site CDA09_21890 bfcb1e1aa85d9a777710c69f22b2456d 864 Pfam PF02901 Pyruvate formate lyase-like 44 715 4.5E-181 T 01-11-2018 IPR004184 Pyruvate formate lyase domain GO:0003824 CDA09_21890 bfcb1e1aa85d9a777710c69f22b2456d 864 SUPERFAMILY SSF51998 60 851 1.28E-181 T 01-11-2018 CDA09_11840 1e69a0b526656c32d340b759fdd133a4 186 Gene3D G3DSA:3.30.1380.10 78 186 1.1E-11 T 01-11-2018 IPR009045 Hedgehog signalling/DD-peptidase zinc-binding domain superfamily Reactome: R-HSA-373080|Reactome: R-HSA-5358346|Reactome: R-HSA-5362798|Reactome: R-HSA-5632681|Reactome: R-HSA-5632684|Reactome: R-HSA-5635838|Reactome: R-HSA-5658034 CDA09_11840 1e69a0b526656c32d340b759fdd133a4 186 Pfam PF05951 Bacterial protein of unknown function (DUF882) 41 184 1.5E-48 T 01-11-2018 IPR010275 Protein of unknown function DUF882 CDA09_11840 1e69a0b526656c32d340b759fdd133a4 186 SUPERFAMILY SSF55166 70 184 9.16E-33 T 01-11-2018 IPR009045 Hedgehog signalling/DD-peptidase zinc-binding domain superfamily Reactome: R-HSA-373080|Reactome: R-HSA-5358346|Reactome: R-HSA-5362798|Reactome: R-HSA-5632681|Reactome: R-HSA-5632684|Reactome: R-HSA-5635838|Reactome: R-HSA-5658034 CDA09_05005 7cf407a923c1e55e239d4606a399dfae 78 Gene3D G3DSA:1.10.10.60 1 77 1.3E-25 T 01-11-2018 CDA09_05005 7cf407a923c1e55e239d4606a399dfae 78 SUPERFAMILY SSF46689 9 77 2.51E-21 T 01-11-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 CDA09_05005 7cf407a923c1e55e239d4606a399dfae 78 PRINTS PR01590 FIS bacterial regulatory protein HTH signature 58 78 4.8E-11 T 01-11-2018 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 CDA09_05005 7cf407a923c1e55e239d4606a399dfae 78 PRINTS PR01590 FIS bacterial regulatory protein HTH signature 41 58 4.8E-11 T 01-11-2018 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 CDA09_05005 7cf407a923c1e55e239d4606a399dfae 78 PRINTS PR01591 DNA-binding protein FIS signature 6 22 5.5E-5 T 01-11-2018 IPR005412 DNA-binding protein Fis GO:0003677|GO:0006355 CDA09_05005 7cf407a923c1e55e239d4606a399dfae 78 PRINTS PR01591 DNA-binding protein FIS signature 22 37 5.5E-5 T 01-11-2018 IPR005412 DNA-binding protein Fis GO:0003677|GO:0006355 CDA09_05005 7cf407a923c1e55e239d4606a399dfae 78 PRINTS PR01591 DNA-binding protein FIS signature 37 49 5.5E-5 T 01-11-2018 IPR005412 DNA-binding protein Fis GO:0003677|GO:0006355 CDA09_05005 7cf407a923c1e55e239d4606a399dfae 78 PIRSF PIRSF002097 1 78 2.6E-32 T 01-11-2018 IPR005412 DNA-binding protein Fis GO:0003677|GO:0006355 CDA09_05005 7cf407a923c1e55e239d4606a399dfae 78 Pfam PF02954 Bacterial regulatory protein, Fis family 35 75 2.0E-15 T 01-11-2018 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 CDA09_09115 b13db42844a2fdb7ce96c28682461f01 492 SUPERFAMILY SSF53720 6 481 1.01E-153 T 01-11-2018 IPR016161 Aldehyde/histidinol dehydrogenase GO:0016491|GO:0055114 CDA09_09115 b13db42844a2fdb7ce96c28682461f01 492 Gene3D G3DSA:3.40.605.10 26 478 1.1E-170 T 01-11-2018 IPR016162 Aldehyde dehydrogenase, N-terminal GO:0016491|GO:0055114 CDA09_09115 b13db42844a2fdb7ce96c28682461f01 492 Gene3D G3DSA:3.40.309.10 259 449 1.1E-170 T 01-11-2018 IPR016163 Aldehyde dehydrogenase, C-terminal GO:0016491|GO:0016620|GO:0055114 CDA09_09115 b13db42844a2fdb7ce96c28682461f01 492 ProSitePatterns PS00687 Aldehyde dehydrogenases glutamic acid active site. 255 262 - T 01-11-2018 IPR029510 Aldehyde dehydrogenase, glutamic acid active site GO:0016491|GO:0055114 CDA09_09115 b13db42844a2fdb7ce96c28682461f01 492 Pfam PF00171 Aldehyde dehydrogenase family 17 480 1.2E-159 T 01-11-2018 IPR015590 Aldehyde dehydrogenase domain GO:0016491|GO:0055114 CDA09_06490 010f6015de24c681a522bb6c23a93225 136 SUPERFAMILY SSF52172 7 130 6.69E-24 T 01-11-2018 IPR011006 CheY-like superfamily CDA09_06490 010f6015de24c681a522bb6c23a93225 136 SMART SM00448 9 125 3.3E-15 T 01-11-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 CDA09_06490 010f6015de24c681a522bb6c23a93225 136 Pfam PF00072 Response regulator receiver domain 11 125 7.4E-18 T 01-11-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 CDA09_06490 010f6015de24c681a522bb6c23a93225 136 Gene3D G3DSA:3.40.50.2300 6 135 1.5E-22 T 01-11-2018 CDA09_04225 5d1383c8deb036ab40b04459dd7ea4f4 656 Pfam PF02080 TrkA-C domain 586 649 1.9E-10 T 01-11-2018 IPR006037 Regulator of K+ conductance, C-terminal GO:0006813|GO:0008324 CDA09_04225 5d1383c8deb036ab40b04459dd7ea4f4 656 Gene3D G3DSA:1.20.1530.20 3 382 5.2E-82 T 01-11-2018 IPR038770 Sodium/solute symporter superfamily CDA09_04225 5d1383c8deb036ab40b04459dd7ea4f4 656 Gene3D G3DSA:3.30.70.1450 580 654 1.1E-10 T 01-11-2018 IPR036721 Regulator of K+ conductance, C-terminal domain superfamily GO:0006813 CDA09_04225 5d1383c8deb036ab40b04459dd7ea4f4 656 SUPERFAMILY SSF116726 580 650 1.96E-11 T 01-11-2018 IPR036721 Regulator of K+ conductance, C-terminal domain superfamily GO:0006813 CDA09_04225 5d1383c8deb036ab40b04459dd7ea4f4 656 Gene3D G3DSA:3.40.50.720 404 565 2.1E-36 T 01-11-2018 CDA09_04225 5d1383c8deb036ab40b04459dd7ea4f4 656 SUPERFAMILY SSF51735 406 545 2.17E-33 T 01-11-2018 IPR036291 NAD(P)-binding domain superfamily CDA09_04225 5d1383c8deb036ab40b04459dd7ea4f4 656 Pfam PF00999 Sodium/hydrogen exchanger family 8 373 1.0E-63 T 01-11-2018 IPR006153 Cation/H+ exchanger GO:0006812|GO:0015299|GO:0016021|GO:0055085 CDA09_04225 5d1383c8deb036ab40b04459dd7ea4f4 656 TIGRFAM TIGR00932 2a37: transporter, monovalent cation:proton antiporter-2 (CPA2) family 12 283 1.7E-72 T 01-11-2018 IPR004771 K+/H+ exchanger GO:0006812|GO:0008324|GO:0016021 CDA09_04225 5d1383c8deb036ab40b04459dd7ea4f4 656 Pfam PF02254 TrkA-N domain 409 522 3.7E-25 T 01-11-2018 IPR003148 Regulator of K+ conductance, N-terminal GO:0006813 CDA09_13895 6214b5963e2e5e2b98f1af267fe91faf 424 SUPERFAMILY SSF48264 53 423 7.2E-79 T 01-11-2018 IPR036396 Cytochrome P450 superfamily GO:0005506|GO:0016705|GO:0020037|GO:0055114 CDA09_13895 6214b5963e2e5e2b98f1af267fe91faf 424 ProSitePatterns PS00086 Cytochrome P450 cysteine heme-iron ligand signature. 366 375 - T 01-11-2018 IPR017972 Cytochrome P450, conserved site GO:0016705|GO:0055114 CDA09_13895 6214b5963e2e5e2b98f1af267fe91faf 424 PRINTS PR00359 B-class P450 signature 315 342 1.7E-29 T 01-11-2018 IPR002397 Cytochrome P450, B-class GO:0005506|GO:0020037|GO:0055114 CDA09_13895 6214b5963e2e5e2b98f1af267fe91faf 424 PRINTS PR00359 B-class P450 signature 104 115 1.7E-29 T 01-11-2018 IPR002397 Cytochrome P450, B-class GO:0005506|GO:0020037|GO:0055114 CDA09_13895 6214b5963e2e5e2b98f1af267fe91faf 424 PRINTS PR00359 B-class P450 signature 373 384 1.7E-29 T 01-11-2018 IPR002397 Cytochrome P450, B-class GO:0005506|GO:0020037|GO:0055114 CDA09_13895 6214b5963e2e5e2b98f1af267fe91faf 424 PRINTS PR00359 B-class P450 signature 343 358 1.7E-29 T 01-11-2018 IPR002397 Cytochrome P450, B-class GO:0005506|GO:0020037|GO:0055114 CDA09_13895 6214b5963e2e5e2b98f1af267fe91faf 424 PRINTS PR00359 B-class P450 signature 167 182 1.7E-29 T 01-11-2018 IPR002397 Cytochrome P450, B-class GO:0005506|GO:0020037|GO:0055114 CDA09_13895 6214b5963e2e5e2b98f1af267fe91faf 424 PRINTS PR00359 B-class P450 signature 298 309 1.7E-29 T 01-11-2018 IPR002397 Cytochrome P450, B-class GO:0005506|GO:0020037|GO:0055114 CDA09_13895 6214b5963e2e5e2b98f1af267fe91faf 424 PRINTS PR00359 B-class P450 signature 364 373 1.7E-29 T 01-11-2018 IPR002397 Cytochrome P450, B-class GO:0005506|GO:0020037|GO:0055114 CDA09_13895 6214b5963e2e5e2b98f1af267fe91faf 424 Gene3D G3DSA:1.10.630.10 4 424 9.3E-90 T 01-11-2018 IPR036396 Cytochrome P450 superfamily GO:0005506|GO:0016705|GO:0020037|GO:0055114 CDA09_13895 6214b5963e2e5e2b98f1af267fe91faf 424 Pfam PF00067 Cytochrome P450 56 401 2.5E-32 T 01-11-2018 IPR001128 Cytochrome P450 GO:0005506|GO:0016705|GO:0020037|GO:0055114 CDA09_13895 6214b5963e2e5e2b98f1af267fe91faf 424 PRINTS PR00385 P450 superfamily signature 373 384 1.0E-5 T 01-11-2018 IPR001128 Cytochrome P450 GO:0005506|GO:0016705|GO:0020037|GO:0055114 CDA09_13895 6214b5963e2e5e2b98f1af267fe91faf 424 PRINTS PR00385 P450 superfamily signature 298 309 1.0E-5 T 01-11-2018 IPR001128 Cytochrome P450 GO:0005506|GO:0016705|GO:0020037|GO:0055114 CDA09_13895 6214b5963e2e5e2b98f1af267fe91faf 424 PRINTS PR00385 P450 superfamily signature 364 373 1.0E-5 T 01-11-2018 IPR001128 Cytochrome P450 GO:0005506|GO:0016705|GO:0020037|GO:0055114 CDA09_13895 6214b5963e2e5e2b98f1af267fe91faf 424 PRINTS PR00385 P450 superfamily signature 263 280 1.0E-5 T 01-11-2018 IPR001128 Cytochrome P450 GO:0005506|GO:0016705|GO:0020037|GO:0055114 CDA09_09500 c6f4b9dd072036c69bedbb41f0bb63bd 535 Gene3D G3DSA:3.40.50.12780 2 429 8.6E-74 T 01-11-2018 CDA09_09500 c6f4b9dd072036c69bedbb41f0bb63bd 535 Pfam PF00501 AMP-binding enzyme 14 436 8.5E-61 T 01-11-2018 IPR000873 AMP-dependent synthetase/ligase GO:0003824 CDA09_09500 c6f4b9dd072036c69bedbb41f0bb63bd 535 SUPERFAMILY SSF56801 5 532 4.84E-109 T 01-11-2018 CDA09_09500 c6f4b9dd072036c69bedbb41f0bb63bd 535 Gene3D G3DSA:3.30.300.310 432 530 2.0E-23 T 01-11-2018 CDA09_09500 c6f4b9dd072036c69bedbb41f0bb63bd 535 Pfam PF13193 AMP-binding enzyme C-terminal domain 445 520 4.4E-16 T 01-11-2018 IPR025110 AMP-binding enzyme, C-terminal domain CDA09_09500 c6f4b9dd072036c69bedbb41f0bb63bd 535 ProSitePatterns PS00455 Putative AMP-binding domain signature. 169 180 - T 01-11-2018 IPR020845 AMP-binding, conserved site CDA09_17530 9611555f250c998f53a7491c41ac86bf 296 Gene3D G3DSA:3.40.50.1100 37 142 2.1E-108 T 01-11-2018 CDA09_17530 9611555f250c998f53a7491c41ac86bf 296 ProSitePatterns PS00901 Cysteine synthase/cystathionine beta-synthase P-phosphate attachment site. 32 50 - T 01-11-2018 IPR001216 Cysteine synthase/cystathionine beta-synthase, pyridoxal-phosphate attachment site GO:0006535 CDA09_17530 9611555f250c998f53a7491c41ac86bf 296 TIGRFAM TIGR01138 cysM: cysteine synthase B 5 294 1.1E-138 T 01-11-2018 IPR005858 Cysteine synthase CysM GO:0004124|GO:0006535 KEGG: 00270+2.5.1.47|KEGG: 00920+2.5.1.47|MetaCyc: PWY-6936 CDA09_17530 9611555f250c998f53a7491c41ac86bf 296 Gene3D G3DSA:3.40.50.1100 10 290 2.1E-108 T 01-11-2018 CDA09_17530 9611555f250c998f53a7491c41ac86bf 296 Pfam PF00291 Pyridoxal-phosphate dependent enzyme 8 283 2.4E-66 T 01-11-2018 IPR001926 Pyridoxal-phosphate dependent enzyme CDA09_17530 9611555f250c998f53a7491c41ac86bf 296 SUPERFAMILY SSF53686 4 291 1.44E-90 T 01-11-2018 IPR036052 Tryptophan synthase beta subunit-like PLP-dependent enzyme CDA09_17530 9611555f250c998f53a7491c41ac86bf 296 TIGRFAM TIGR01136 cysKM: cysteine synthase 8 294 6.4E-118 T 01-11-2018 IPR005856 Cysteine synthase GO:0004124|GO:0006535 KEGG: 00270+2.5.1.47|KEGG: 00920+2.5.1.47|MetaCyc: PWY-6936 CDA09_22780 1e08cdb76e0c481ce7ef33317bd76ec3 188 TIGRFAM TIGR01841 phasin: phasin family protein 29 113 7.1E-15 T 01-11-2018 IPR010127 Phasin, subfamily 1 CDA09_22780 1e08cdb76e0c481ce7ef33317bd76ec3 188 Pfam PF09361 Phasin protein 8 106 4.2E-22 T 01-11-2018 IPR018968 Phasin CDA09_03875 9257a1b6cccec83e509449a6a13c9355 346 Pfam PF06725 3D domain 265 338 3.2E-24 T 01-11-2018 IPR010611 3D domain GO:0004553|GO:0009254|GO:0019867 CDA09_03875 9257a1b6cccec83e509449a6a13c9355 346 SMART SM00925 87 244 3.8E-91 T 01-11-2018 IPR005300 Lytic transglycosylase MltA, domain B GO:0004553 CDA09_03875 9257a1b6cccec83e509449a6a13c9355 346 Gene3D G3DSA:2.40.240.50 91 246 6.4E-63 T 01-11-2018 CDA09_03875 9257a1b6cccec83e509449a6a13c9355 346 Pfam PF03562 MltA specific insert domain 12 244 1.2E-87 T 01-11-2018 IPR005300 Lytic transglycosylase MltA, domain B GO:0004553 CDA09_03875 9257a1b6cccec83e509449a6a13c9355 346 PIRSF PIRSF019422 1 346 2.1E-143 T 01-11-2018 IPR026044 Membrane-bound lytic murein transglycosylase A CDA09_03875 9257a1b6cccec83e509449a6a13c9355 346 SUPERFAMILY SSF50685 3 342 4.19E-135 T 01-11-2018 IPR036908 RlpA-like domain superfamily CDA09_03875 9257a1b6cccec83e509449a6a13c9355 346 Gene3D G3DSA:2.40.40.10 248 345 3.8E-40 T 01-11-2018 IPR036908 RlpA-like domain superfamily CDA09_03875 9257a1b6cccec83e509449a6a13c9355 346 Gene3D G3DSA:2.40.40.10 1 90 5.2E-21 T 01-11-2018 IPR036908 RlpA-like domain superfamily CDA09_20165 fd80256383c44d3593db8b0f510375f8 408 SUPERFAMILY SSF51419 34 286 6.4E-65 T 01-11-2018 IPR029066 PLP-binding barrel CDA09_20165 fd80256383c44d3593db8b0f510375f8 408 Gene3D G3DSA:2.40.37.10 268 406 1.5E-40 T 01-11-2018 IPR009006 Alanine racemase/group IV decarboxylase, C-terminal GO:0003824 CDA09_20165 fd80256383c44d3593db8b0f510375f8 408 SUPERFAMILY SSF50621 254 402 1.38E-28 T 01-11-2018 IPR009006 Alanine racemase/group IV decarboxylase, C-terminal GO:0003824 CDA09_20165 fd80256383c44d3593db8b0f510375f8 408 ProSitePatterns PS00878 Orn/DAP/Arg decarboxylases family 2 pyridoxal-P attachment site. 57 75 - T 01-11-2018 IPR022653 Orn/DAP/Arg decarboxylase 2, pyridoxal-phosphate binding site CDA09_20165 fd80256383c44d3593db8b0f510375f8 408 PRINTS PR01179 Ornithine/diaminopimelate/arginine (ODA) decarboxylase family signature 77 89 2.5E-8 T 01-11-2018 IPR000183 Ornithine/DAP/Arg decarboxylase GO:0003824 CDA09_20165 fd80256383c44d3593db8b0f510375f8 408 PRINTS PR01179 Ornithine/diaminopimelate/arginine (ODA) decarboxylase family signature 57 75 2.5E-8 T 01-11-2018 IPR000183 Ornithine/DAP/Arg decarboxylase GO:0003824 CDA09_20165 fd80256383c44d3593db8b0f510375f8 408 PRINTS PR01179 Ornithine/diaminopimelate/arginine (ODA) decarboxylase family signature 273 292 2.5E-8 T 01-11-2018 IPR000183 Ornithine/DAP/Arg decarboxylase GO:0003824 CDA09_20165 fd80256383c44d3593db8b0f510375f8 408 PRINTS PR01179 Ornithine/diaminopimelate/arginine (ODA) decarboxylase family signature 189 202 2.5E-8 T 01-11-2018 IPR000183 Ornithine/DAP/Arg decarboxylase GO:0003824 CDA09_20165 fd80256383c44d3593db8b0f510375f8 408 Pfam PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain 31 381 3.5E-13 T 01-11-2018 IPR022643 Orn/DAP/Arg decarboxylase 2, C-terminal GO:0003824 CDA09_20165 fd80256383c44d3593db8b0f510375f8 408 Gene3D G3DSA:3.20.20.10 36 267 4.1E-48 T 01-11-2018 IPR029066 PLP-binding barrel CDA09_20165 fd80256383c44d3593db8b0f510375f8 408 Pfam PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain 37 283 6.0E-32 T 01-11-2018 IPR022644 Orn/DAP/Arg decarboxylase 2, N-terminal GO:0003824 CDA09_20165 fd80256383c44d3593db8b0f510375f8 408 PRINTS PR01182 Ornithine decarboxylase signature 55 82 1.6E-9 T 01-11-2018 IPR002433 Ornithine decarboxylase GO:0006596 CDA09_20165 fd80256383c44d3593db8b0f510375f8 408 PRINTS PR01182 Ornithine decarboxylase signature 368 381 1.6E-9 T 01-11-2018 IPR002433 Ornithine decarboxylase GO:0006596 CDA09_20165 fd80256383c44d3593db8b0f510375f8 408 PRINTS PR01182 Ornithine decarboxylase signature 98 122 1.6E-9 T 01-11-2018 IPR002433 Ornithine decarboxylase GO:0006596 CDA09_16180 328144c139d61ed5a1bdcb84ab5d68d2 101 Hamap MF_01456 NAD(P)H-quinone oxidoreductase subunit 4L, chloroplastic [ndhE]. 2 101 20.74 T 01-11-2018 IPR001133 NADH-ubiquinone oxidoreductase chain 4L/K GO:0016651|GO:0042773|GO:0055114 CDA09_16180 328144c139d61ed5a1bdcb84ab5d68d2 101 Pfam PF00420 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L 7 96 1.8E-23 T 01-11-2018 IPR039428 NADH-ubiquinone oxidoreductase chain 4L/Mnh complex subunit C1-like CDA09_20380 91a0589c0c4f02ca004d343ed4e8d79f 297 Pfam PF04321 RmlD substrate binding domain 1 295 6.1E-111 T 01-11-2018 IPR029903 RmlD-like substrate binding domain Reactome: R-HSA-156581|Reactome: R-HSA-5689880 CDA09_20380 91a0589c0c4f02ca004d343ed4e8d79f 297 TIGRFAM TIGR01214 rmlD: dTDP-4-dehydrorhamnose reductase 2 294 5.9E-101 T 01-11-2018 IPR005913 dTDP-4-dehydrorhamnose reductase family Reactome: R-HSA-156581|Reactome: R-HSA-5689880 CDA09_20380 91a0589c0c4f02ca004d343ed4e8d79f 297 Gene3D G3DSA:3.40.50.720 4 282 3.8E-111 T 01-11-2018 CDA09_20380 91a0589c0c4f02ca004d343ed4e8d79f 297 SUPERFAMILY SSF51735 1 295 1.42E-99 T 01-11-2018 IPR036291 NAD(P)-binding domain superfamily CDA09_20380 91a0589c0c4f02ca004d343ed4e8d79f 297 Gene3D G3DSA:3.90.25.10 158 290 3.8E-111 T 01-11-2018 CDA09_22665 d1203835febb0006407d0b65c059302e 514 Gene3D G3DSA:3.30.750.190 294 422 1.1E-86 T 01-11-2018 CDA09_22665 d1203835febb0006407d0b65c059302e 514 SUPERFAMILY SSF48179 189 295 1.62E-32 T 01-11-2018 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily GO:0055114 CDA09_22665 d1203835febb0006407d0b65c059302e 514 Pfam PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain 190 287 1.3E-31 T 01-11-2018 IPR006108 3-hydroxyacyl-CoA dehydrogenase, C-terminal GO:0003857|GO:0006631|GO:0016491|GO:0055114 KEGG: 00062+4.2.1.17+1.1.1.35|KEGG: 00071+4.2.1.17+1.1.1.35|KEGG: 00120+1.1.1.35|KEGG: 00280+4.2.1.17+1.1.1.35|KEGG: 00281+4.2.1.17+1.1.1.35|KEGG: 00310+4.2.1.17+1.1.1.35|KEGG: 00360+4.2.1.17|KEGG: 00362+4.2.1.17+1.1.1.35|KEGG: 00380+4.2.1.17+1.1.1.35|KEGG: 00410+4.2.1.17|KEGG: 00592+4.2.1.17|KEGG: 00623+1.1.1.35|KEGG: 00627+4.2.1.17|KEGG: 00640+4.2.1.17|KEGG: 00650+4.2.1.17+1.1.1.35|KEGG: 00720+4.2.1.17+1.1.1.35|KEGG: 00903+4.2.1.17|KEGG: 00930+4.2.1.17+1.1.1.35|MetaCyc: PWY-1361|MetaCyc: PWY-5109|MetaCyc: PWY-5136|MetaCyc: PWY-5138|MetaCyc: PWY-5177|MetaCyc: PWY-5789|MetaCyc: PWY-6435|MetaCyc: PWY-6583|MetaCyc: PWY-6863|MetaCyc: PWY-6883|MetaCyc: PWY-6944|MetaCyc: PWY-6945|MetaCyc: PWY-6946|MetaCyc: PWY-7007|MetaCyc: PWY-7046|MetaCyc: PWY-7094|MetaCyc: PWY-7216|MetaCyc: PWY-735|MetaCyc: PWY-7401|MetaCyc: PWY-7606|MetaCyc: PWY-7654|MetaCyc: PWY-7656|MetaCyc: PWY-7726|MetaCyc: PWY-7778|MetaCyc: PWY-7779 CDA09_22665 d1203835febb0006407d0b65c059302e 514 Pfam PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain 426 505 4.3E-14 T 01-11-2018 IPR006108 3-hydroxyacyl-CoA dehydrogenase, C-terminal GO:0003857|GO:0006631|GO:0016491|GO:0055114 KEGG: 00062+4.2.1.17+1.1.1.35|KEGG: 00071+4.2.1.17+1.1.1.35|KEGG: 00120+1.1.1.35|KEGG: 00280+4.2.1.17+1.1.1.35|KEGG: 00281+4.2.1.17+1.1.1.35|KEGG: 00310+4.2.1.17+1.1.1.35|KEGG: 00360+4.2.1.17|KEGG: 00362+4.2.1.17+1.1.1.35|KEGG: 00380+4.2.1.17+1.1.1.35|KEGG: 00410+4.2.1.17|KEGG: 00592+4.2.1.17|KEGG: 00623+1.1.1.35|KEGG: 00627+4.2.1.17|KEGG: 00640+4.2.1.17|KEGG: 00650+4.2.1.17+1.1.1.35|KEGG: 00720+4.2.1.17+1.1.1.35|KEGG: 00903+4.2.1.17|KEGG: 00930+4.2.1.17+1.1.1.35|MetaCyc: PWY-1361|MetaCyc: PWY-5109|MetaCyc: PWY-5136|MetaCyc: PWY-5138|MetaCyc: PWY-5177|MetaCyc: PWY-5789|MetaCyc: PWY-6435|MetaCyc: PWY-6583|MetaCyc: PWY-6863|MetaCyc: PWY-6883|MetaCyc: PWY-6944|MetaCyc: PWY-6945|MetaCyc: PWY-6946|MetaCyc: PWY-7007|MetaCyc: PWY-7046|MetaCyc: PWY-7094|MetaCyc: PWY-7216|MetaCyc: PWY-735|MetaCyc: PWY-7401|MetaCyc: PWY-7606|MetaCyc: PWY-7654|MetaCyc: PWY-7656|MetaCyc: PWY-7726|MetaCyc: PWY-7778|MetaCyc: PWY-7779 CDA09_22665 d1203835febb0006407d0b65c059302e 514 SUPERFAMILY SSF51735 9 189 4.38E-53 T 01-11-2018 IPR036291 NAD(P)-binding domain superfamily CDA09_22665 d1203835febb0006407d0b65c059302e 514 Gene3D G3DSA:1.10.1040.50 193 503 1.1E-86 T 01-11-2018 CDA09_22665 d1203835febb0006407d0b65c059302e 514 Pfam PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain 9 185 2.5E-59 T 01-11-2018 IPR006176 3-hydroxyacyl-CoA dehydrogenase, NAD binding GO:0003857|GO:0006631|GO:0016491|GO:0055114 KEGG: 00062+4.2.1.17+1.1.1.35|KEGG: 00071+4.2.1.17+1.1.1.35|KEGG: 00120+1.1.1.35|KEGG: 00280+4.2.1.17+1.1.1.35|KEGG: 00281+4.2.1.17+1.1.1.35|KEGG: 00310+4.2.1.17+1.1.1.35|KEGG: 00360+4.2.1.17|KEGG: 00362+4.2.1.17+1.1.1.35|KEGG: 00380+4.2.1.17+1.1.1.35|KEGG: 00410+4.2.1.17|KEGG: 00592+4.2.1.17|KEGG: 00623+1.1.1.35|KEGG: 00627+4.2.1.17|KEGG: 00640+4.2.1.17|KEGG: 00650+4.2.1.17+1.1.1.35|KEGG: 00720+4.2.1.17+1.1.1.35|KEGG: 00903+4.2.1.17|KEGG: 00930+4.2.1.17+1.1.1.35|MetaCyc: PWY-1361|MetaCyc: PWY-5109|MetaCyc: PWY-5136|MetaCyc: PWY-5138|MetaCyc: PWY-5177|MetaCyc: PWY-5789|MetaCyc: PWY-6435|MetaCyc: PWY-6583|MetaCyc: PWY-6863|MetaCyc: PWY-6883|MetaCyc: PWY-6944|MetaCyc: PWY-6945|MetaCyc: PWY-6946|MetaCyc: PWY-7007|MetaCyc: PWY-7046|MetaCyc: PWY-7094|MetaCyc: PWY-7216|MetaCyc: PWY-735|MetaCyc: PWY-7401|MetaCyc: PWY-7606|MetaCyc: PWY-7654|MetaCyc: PWY-7656|MetaCyc: PWY-7726|MetaCyc: PWY-7778|MetaCyc: PWY-7779 CDA09_22665 d1203835febb0006407d0b65c059302e 514 Gene3D G3DSA:3.40.50.720 6 192 1.9E-64 T 01-11-2018 CDA09_22665 d1203835febb0006407d0b65c059302e 514 SUPERFAMILY SSF48179 425 506 2.81E-17 T 01-11-2018 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily GO:0055114 CDA09_22665 d1203835febb0006407d0b65c059302e 514 TIGRFAM TIGR02279 PaaC-3OHAcCoADH: 3-hydroxyacyl-CoA dehydrogenase PaaC 3 508 1.3E-236 T 01-11-2018 IPR011967 3-hydroxyacyl-CoA dehydrogenase PaaC GO:0008691|GO:0010124 CDA09_04105 08e4e8c6865a24a13ad1bb66743f6856 571 Pfam PF00512 His Kinase A (phospho-acceptor) domain 198 261 3.2E-8 T 01-11-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 CDA09_04105 08e4e8c6865a24a13ad1bb66743f6856 571 Pfam PF00989 PAS fold 31 140 2.2E-15 T 01-11-2018 IPR013767 PAS fold GO:0006355 CDA09_04105 08e4e8c6865a24a13ad1bb66743f6856 571 Pfam PF00072 Response regulator receiver domain 451 562 4.3E-15 T 01-11-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 CDA09_04105 08e4e8c6865a24a13ad1bb66743f6856 571 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 24 150 3.8E-26 T 01-11-2018 IPR000014 PAS domain CDA09_04105 08e4e8c6865a24a13ad1bb66743f6856 571 SUPERFAMILY SSF55874 254 426 5.76E-37 T 01-11-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily CDA09_04105 08e4e8c6865a24a13ad1bb66743f6856 571 SUPERFAMILY SSF52172 449 568 1.02E-25 T 01-11-2018 IPR011006 CheY-like superfamily CDA09_04105 08e4e8c6865a24a13ad1bb66743f6856 571 SMART SM00091 27 93 1.4E-12 T 01-11-2018 IPR000014 PAS domain CDA09_04105 08e4e8c6865a24a13ad1bb66743f6856 571 Gene3D G3DSA:3.30.565.10 266 430 1.1E-41 T 01-11-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily CDA09_04105 08e4e8c6865a24a13ad1bb66743f6856 571 Gene3D G3DSA:1.10.287.130 189 262 1.5E-20 T 01-11-2018 CDA09_04105 08e4e8c6865a24a13ad1bb66743f6856 571 Gene3D G3DSA:3.30.450.20 24 145 1.9E-29 T 01-11-2018 CDA09_04105 08e4e8c6865a24a13ad1bb66743f6856 571 SUPERFAMILY SSF47384 190 260 1.37E-9 T 01-11-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 CDA09_04105 08e4e8c6865a24a13ad1bb66743f6856 571 Gene3D G3DSA:3.40.50.2300 447 569 4.5E-25 T 01-11-2018 CDA09_04105 08e4e8c6865a24a13ad1bb66743f6856 571 SMART SM00448 449 562 3.2E-17 T 01-11-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 CDA09_04105 08e4e8c6865a24a13ad1bb66743f6856 571 SMART SM00387 304 427 3.9E-25 T 01-11-2018 IPR003594 Histidine kinase/HSP90-like ATPase CDA09_04105 08e4e8c6865a24a13ad1bb66743f6856 571 SMART SM00388 197 263 2.8E-7 T 01-11-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 CDA09_04105 08e4e8c6865a24a13ad1bb66743f6856 571 PRINTS PR00344 Bacterial sensor protein C-terminal signature 387 405 2.5E-16 T 01-11-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 CDA09_04105 08e4e8c6865a24a13ad1bb66743f6856 571 PRINTS PR00344 Bacterial sensor protein C-terminal signature 356 370 2.5E-16 T 01-11-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 CDA09_04105 08e4e8c6865a24a13ad1bb66743f6856 571 PRINTS PR00344 Bacterial sensor protein C-terminal signature 411 424 2.5E-16 T 01-11-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 CDA09_04105 08e4e8c6865a24a13ad1bb66743f6856 571 PRINTS PR00344 Bacterial sensor protein C-terminal signature 374 384 2.5E-16 T 01-11-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 CDA09_04105 08e4e8c6865a24a13ad1bb66743f6856 571 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 305 424 1.2E-18 T 01-11-2018 IPR003594 Histidine kinase/HSP90-like ATPase CDA09_04105 08e4e8c6865a24a13ad1bb66743f6856 571 SUPERFAMILY SSF55785 38 152 2.65E-27 T 01-11-2018 IPR035965 PAS domain superfamily CDA09_16560 1fd83229c02d0340d58a02c249cbbf79 322 Gene3D G3DSA:3.40.1090.10 2 104 1.1E-22 T 01-11-2018 CDA09_16560 1fd83229c02d0340d58a02c249cbbf79 322 Gene3D G3DSA:3.40.1090.10 105 198 7.6E-16 T 01-11-2018 CDA09_16560 1fd83229c02d0340d58a02c249cbbf79 322 SUPERFAMILY SSF52151 14 312 2.22E-54 T 01-11-2018 IPR016035 Acyl transferase/acyl hydrolase/lysophospholipase CDA09_16560 1fd83229c02d0340d58a02c249cbbf79 322 Pfam PF01734 Patatin-like phospholipase 18 174 8.5E-21 T 01-11-2018 IPR002641 Patatin-like phospholipase domain GO:0006629 CDA09_11030 4eb9f9f97b2330e985f2694dfcc5cfc6 396 SUPERFAMILY SSF56935 26 328 2.06E-9 T 01-11-2018 CDA09_04690 58766aeaf02a8b9246370c6807a98d02 432 Gene3D G3DSA:1.10.3210.10 102 349 4.0E-47 T 01-11-2018 CDA09_04690 58766aeaf02a8b9246370c6807a98d02 432 SUPERFAMILY SSF109604 175 348 4.32E-21 T 01-11-2018 CDA09_04690 58766aeaf02a8b9246370c6807a98d02 432 Pfam PF13487 HD domain 237 297 2.0E-10 T 01-11-2018 CDA09_04690 58766aeaf02a8b9246370c6807a98d02 432 Pfam PF11871 Domain of unknown function (DUF3391) 1 154 1.6E-14 T 01-11-2018 IPR021812 Protein of unknown function DUF3391 CDA09_14700 9c2fd619762fd389ddecb59de8aec2b0 494 Pfam PF00512 His Kinase A (phospho-acceptor) domain 265 333 5.8E-20 T 01-11-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 CDA09_14700 9c2fd619762fd389ddecb59de8aec2b0 494 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 128 252 1.0E-23 T 01-11-2018 IPR000014 PAS domain CDA09_14700 9c2fd619762fd389ddecb59de8aec2b0 494 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 9 121 5.9E-18 T 01-11-2018 IPR000014 PAS domain CDA09_14700 9c2fd619762fd389ddecb59de8aec2b0 494 Gene3D G3DSA:3.30.450.20 129 247 2.9E-28 T 01-11-2018 CDA09_14700 9c2fd619762fd389ddecb59de8aec2b0 494 Pfam PF00989 PAS fold 9 115 3.1E-14 T 01-11-2018 IPR013767 PAS fold GO:0006355 CDA09_14700 9c2fd619762fd389ddecb59de8aec2b0 494 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 381 493 1.2E-25 T 01-11-2018 IPR003594 Histidine kinase/HSP90-like ATPase CDA09_14700 9c2fd619762fd389ddecb59de8aec2b0 494 Gene3D G3DSA:3.30.565.10 334 493 1.9E-45 T 01-11-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily CDA09_14700 9c2fd619762fd389ddecb59de8aec2b0 494 SUPERFAMILY SSF55874 322 492 4.85E-43 T 01-11-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily CDA09_14700 9c2fd619762fd389ddecb59de8aec2b0 494 SUPERFAMILY SSF47384 249 334 1.88E-23 T 01-11-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 CDA09_14700 9c2fd619762fd389ddecb59de8aec2b0 494 SMART SM00086 76 118 0.017 T 01-11-2018 IPR001610 PAC motif CDA09_14700 9c2fd619762fd389ddecb59de8aec2b0 494 SMART SM00086 205 245 9.2 T 01-11-2018 IPR001610 PAC motif CDA09_14700 9c2fd619762fd389ddecb59de8aec2b0 494 PRINTS PR00344 Bacterial sensor protein C-terminal signature 455 473 1.8E-16 T 01-11-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 CDA09_14700 9c2fd619762fd389ddecb59de8aec2b0 494 PRINTS PR00344 Bacterial sensor protein C-terminal signature 420 434 1.8E-16 T 01-11-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 CDA09_14700 9c2fd619762fd389ddecb59de8aec2b0 494 PRINTS PR00344 Bacterial sensor protein C-terminal signature 438 448 1.8E-16 T 01-11-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 CDA09_14700 9c2fd619762fd389ddecb59de8aec2b0 494 PRINTS PR00344 Bacterial sensor protein C-terminal signature 479 492 1.8E-16 T 01-11-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 CDA09_14700 9c2fd619762fd389ddecb59de8aec2b0 494 Pfam PF13426 PAS domain 139 244 1.0E-12 T 01-11-2018 IPR000014 PAS domain CDA09_14700 9c2fd619762fd389ddecb59de8aec2b0 494 SUPERFAMILY SSF55785 9 110 2.49E-20 T 01-11-2018 IPR035965 PAS domain superfamily CDA09_14700 9c2fd619762fd389ddecb59de8aec2b0 494 SUPERFAMILY SSF55785 140 254 9.54E-27 T 01-11-2018 IPR035965 PAS domain superfamily CDA09_14700 9c2fd619762fd389ddecb59de8aec2b0 494 SMART SM00387 380 494 4.0E-29 T 01-11-2018 IPR003594 Histidine kinase/HSP90-like ATPase CDA09_14700 9c2fd619762fd389ddecb59de8aec2b0 494 SMART SM00091 4 70 2.4E-8 T 01-11-2018 IPR000014 PAS domain CDA09_14700 9c2fd619762fd389ddecb59de8aec2b0 494 SMART SM00091 129 195 2.3E-10 T 01-11-2018 IPR000014 PAS domain CDA09_14700 9c2fd619762fd389ddecb59de8aec2b0 494 Gene3D G3DSA:3.30.450.20 7 128 5.2E-22 T 01-11-2018 CDA09_14700 9c2fd619762fd389ddecb59de8aec2b0 494 Gene3D G3DSA:1.10.287.130 251 333 1.2E-24 T 01-11-2018 CDA09_14700 9c2fd619762fd389ddecb59de8aec2b0 494 SMART SM00388 265 333 3.8E-24 T 01-11-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 CDA09_19865 f567d5968b8337466d78d09000383365 214 ProSitePatterns PS00622 LuxR-type HTH domain signature. 165 192 - T 01-11-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 CDA09_19865 f567d5968b8337466d78d09000383365 214 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 151 165 1.2E-10 T 01-11-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 CDA09_19865 f567d5968b8337466d78d09000383365 214 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 181 193 1.2E-10 T 01-11-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 CDA09_19865 f567d5968b8337466d78d09000383365 214 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 165 181 1.2E-10 T 01-11-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 CDA09_19865 f567d5968b8337466d78d09000383365 214 Pfam PF00196 Bacterial regulatory proteins, luxR family 151 205 2.3E-17 T 01-11-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 CDA09_19865 f567d5968b8337466d78d09000383365 214 Pfam PF00072 Response regulator receiver domain 5 116 6.9E-28 T 01-11-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 CDA09_19865 f567d5968b8337466d78d09000383365 214 Gene3D G3DSA:3.40.50.12740 3 211 4.7E-63 T 01-11-2018 CDA09_19865 f567d5968b8337466d78d09000383365 214 SMART SM00421 148 205 1.0E-19 T 01-11-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 CDA09_19865 f567d5968b8337466d78d09000383365 214 SUPERFAMILY SSF52172 2 133 1.85E-34 T 01-11-2018 IPR011006 CheY-like superfamily CDA09_19865 f567d5968b8337466d78d09000383365 214 SUPERFAMILY SSF46894 132 211 1.77E-20 T 01-11-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 CDA09_19865 f567d5968b8337466d78d09000383365 214 SMART SM00448 3 116 2.2E-31 T 01-11-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 CDA09_17865 f18ef6cd4be96d6d69d3669e98039df3 1337 Gene3D G3DSA:3.30.300.30 419 518 4.4E-28 T 01-11-2018 CDA09_17865 f18ef6cd4be96d6d69d3669e98039df3 1337 TIGRFAM TIGR01733 AA-adenyl-dom: amino acid adenylation domain 57 449 5.0E-123 T 01-11-2018 IPR010071 Amino acid adenylation domain CDA09_17865 f18ef6cd4be96d6d69d3669e98039df3 1337 Pfam PF13193 AMP-binding enzyme C-terminal domain 433 507 8.1E-8 T 01-11-2018 IPR025110 AMP-binding enzyme, C-terminal domain CDA09_17865 f18ef6cd4be96d6d69d3669e98039df3 1337 Gene3D G3DSA:2.160.10.10 1234 1337 2.7E-10 T 01-11-2018 CDA09_17865 f18ef6cd4be96d6d69d3669e98039df3 1337 SUPERFAMILY SSF51161 727 850 2.08E-11 T 01-11-2018 IPR011004 Trimeric LpxA-like superfamily CDA09_17865 f18ef6cd4be96d6d69d3669e98039df3 1337 Gene3D G3DSA:3.40.50.12780 25 418 2.4E-121 T 01-11-2018 CDA09_17865 f18ef6cd4be96d6d69d3669e98039df3 1337 Gene3D G3DSA:1.10.1200.10 519 607 2.2E-9 T 01-11-2018 IPR036736 ACP-like superfamily CDA09_17865 f18ef6cd4be96d6d69d3669e98039df3 1337 SUPERFAMILY SSF47336 550 624 6.19E-6 T 01-11-2018 IPR036736 ACP-like superfamily CDA09_17865 f18ef6cd4be96d6d69d3669e98039df3 1337 Gene3D G3DSA:2.160.10.10 721 853 3.5E-7 T 01-11-2018 CDA09_17865 f18ef6cd4be96d6d69d3669e98039df3 1337 Gene3D G3DSA:2.160.10.10 992 1099 3.9E-6 T 01-11-2018 CDA09_17865 f18ef6cd4be96d6d69d3669e98039df3 1337 SUPERFAMILY SSF56801 30 537 2.22E-144 T 01-11-2018 CDA09_17865 f18ef6cd4be96d6d69d3669e98039df3 1337 ProSitePatterns PS00455 Putative AMP-binding domain signature. 176 187 - T 01-11-2018 IPR020845 AMP-binding, conserved site CDA09_17865 f18ef6cd4be96d6d69d3669e98039df3 1337 SUPERFAMILY SSF51161 1222 1336 1.36E-13 T 01-11-2018 IPR011004 Trimeric LpxA-like superfamily CDA09_17865 f18ef6cd4be96d6d69d3669e98039df3 1337 Pfam PF00501 AMP-binding enzyme 36 425 2.0E-92 T 01-11-2018 IPR000873 AMP-dependent synthetase/ligase GO:0003824 CDA09_17865 f18ef6cd4be96d6d69d3669e98039df3 1337 SUPERFAMILY SSF51161 981 1094 9.01E-18 T 01-11-2018 IPR011004 Trimeric LpxA-like superfamily CDA09_17865 f18ef6cd4be96d6d69d3669e98039df3 1337 ProSitePatterns PS00012 Phosphopantetheine attachment site. 560 575 - T 01-11-2018 IPR006162 Phosphopantetheine attachment site CDA09_17865 f18ef6cd4be96d6d69d3669e98039df3 1337 TIGRFAM TIGR02353 NRPS_term_dom: non-ribosomal peptide synthetase terminal domain of unknown function 631 1332 1.5E-213 T 01-11-2018 IPR012728 Non-ribosomal peptide synthetase, C-terminal CDA09_17335 e49b27d06fe7e6faa9e52a0474c9d157 700 Gene3D G3DSA:1.10.490.80 598 695 1.1E-5 T 01-11-2018 CDA09_17335 e49b27d06fe7e6faa9e52a0474c9d157 700 Gene3D G3DSA:3.40.30.60 363 506 2.7E-53 T 01-11-2018 CDA09_17335 e49b27d06fe7e6faa9e52a0474c9d157 700 PIRSF PIRSF005419 9 699 6.9E-249 T 01-11-2018 IPR001712 Type III secretion system FHIPEP GO:0009306|GO:0016020 CDA09_17335 e49b27d06fe7e6faa9e52a0474c9d157 700 TIGRFAM TIGR01398 FlhA: flagellar biosynthesis protein FlhA 20 695 5.2E-272 T 01-11-2018 IPR006301 Flagellar biosynthesis protein FlhA GO:0016021|GO:0044780 CDA09_17335 e49b27d06fe7e6faa9e52a0474c9d157 700 PRINTS PR00949 Type III secretion system inner membrane A protein family signature 158 176 4.2E-56 T 01-11-2018 IPR001712 Type III secretion system FHIPEP GO:0009306|GO:0016020 CDA09_17335 e49b27d06fe7e6faa9e52a0474c9d157 700 PRINTS PR00949 Type III secretion system inner membrane A protein family signature 139 155 4.2E-56 T 01-11-2018 IPR001712 Type III secretion system FHIPEP GO:0009306|GO:0016020 CDA09_17335 e49b27d06fe7e6faa9e52a0474c9d157 700 PRINTS PR00949 Type III secretion system inner membrane A protein family signature 239 253 4.2E-56 T 01-11-2018 IPR001712 Type III secretion system FHIPEP GO:0009306|GO:0016020 CDA09_17335 e49b27d06fe7e6faa9e52a0474c9d157 700 PRINTS PR00949 Type III secretion system inner membrane A protein family signature 72 91 4.2E-56 T 01-11-2018 IPR001712 Type III secretion system FHIPEP GO:0009306|GO:0016020 CDA09_17335 e49b27d06fe7e6faa9e52a0474c9d157 700 PRINTS PR00949 Type III secretion system inner membrane A protein family signature 188 205 4.2E-56 T 01-11-2018 IPR001712 Type III secretion system FHIPEP GO:0009306|GO:0016020 CDA09_17335 e49b27d06fe7e6faa9e52a0474c9d157 700 PRINTS PR00949 Type III secretion system inner membrane A protein family signature 35 48 4.2E-56 T 01-11-2018 IPR001712 Type III secretion system FHIPEP GO:0009306|GO:0016020 CDA09_17335 e49b27d06fe7e6faa9e52a0474c9d157 700 ProSitePatterns PS00994 Bacterial export FHIPEP family signature. 144 167 - T 01-11-2018 IPR025505 FHIPEP conserved site CDA09_17335 e49b27d06fe7e6faa9e52a0474c9d157 700 Pfam PF00771 FHIPEP family 28 686 6.4E-271 T 01-11-2018 IPR001712 Type III secretion system FHIPEP GO:0009306|GO:0016020 CDA09_17335 e49b27d06fe7e6faa9e52a0474c9d157 700 Gene3D G3DSA:1.10.8.540 507 595 6.7E-29 T 01-11-2018 CDA09_16625 d320767ed2adddc4c96a2aacecde0c55 415 SUPERFAMILY SSF53383 32 414 1.34E-82 T 01-11-2018 IPR015424 Pyridoxal phosphate-dependent transferase CDA09_16625 d320767ed2adddc4c96a2aacecde0c55 415 Pfam PF01053 Cys/Met metabolism PLP-dependent enzyme 13 414 1.1E-98 T 01-11-2018 IPR000277 Cys/Met metabolism, pyridoxal phosphate-dependent enzyme GO:0030170 Reactome: R-HSA-1614558|Reactome: R-HSA-1614603|Reactome: R-HSA-2408508 CDA09_16625 d320767ed2adddc4c96a2aacecde0c55 415 Gene3D G3DSA:3.90.1150.10 282 415 2.8E-37 T 01-11-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 CDA09_16625 d320767ed2adddc4c96a2aacecde0c55 415 Gene3D G3DSA:3.40.640.10 11 281 2.4E-65 T 01-11-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 CDA09_16625 d320767ed2adddc4c96a2aacecde0c55 415 PIRSF PIRSF001434 1 415 7.6E-109 T 01-11-2018 IPR000277 Cys/Met metabolism, pyridoxal phosphate-dependent enzyme GO:0030170 Reactome: R-HSA-1614558|Reactome: R-HSA-1614603|Reactome: R-HSA-2408508 CDA09_02390 99b51e0835d4aee3657667a401787973 68 PIRSF PIRSF002599 1 68 2.3E-24 T 01-11-2018 IPR012156 Cold shock, CspA GO:0003676 CDA09_02390 99b51e0835d4aee3657667a401787973 68 PRINTS PR00050 Cold shock protein signature 4 19 3.8E-17 T 01-11-2018 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 CDA09_02390 99b51e0835d4aee3657667a401787973 68 PRINTS PR00050 Cold shock protein signature 25 34 3.8E-17 T 01-11-2018 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 CDA09_02390 99b51e0835d4aee3657667a401787973 68 PRINTS PR00050 Cold shock protein signature 40 58 3.8E-17 T 01-11-2018 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 CDA09_02390 99b51e0835d4aee3657667a401787973 68 Gene3D G3DSA:2.40.50.140 1 67 2.3E-29 T 01-11-2018 CDA09_02390 99b51e0835d4aee3657667a401787973 68 ProSitePatterns PS00352 'Cold-shock' domain signature. 15 34 - T 01-11-2018 IPR019844 Cold-shock conserved site CDA09_02390 99b51e0835d4aee3657667a401787973 68 SMART SM00357 3 67 1.2E-30 T 01-11-2018 IPR011129 Cold shock domain GO:0003676 CDA09_02390 99b51e0835d4aee3657667a401787973 68 Pfam PF00313 'Cold-shock' DNA-binding domain 3 65 7.8E-30 T 01-11-2018 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 CDA09_02390 99b51e0835d4aee3657667a401787973 68 SUPERFAMILY SSF50249 1 66 1.33E-25 T 01-11-2018 IPR012340 Nucleic acid-binding, OB-fold CDA09_00010 756c1bdc8ce06a0fb8809dbb2dc032f2 477 Gene3D G3DSA:1.10.8.60 308 377 6.9E-24 T 01-11-2018 CDA09_00010 756c1bdc8ce06a0fb8809dbb2dc032f2 477 SUPERFAMILY SSF48295 373 476 8.11E-37 T 01-11-2018 IPR010921 Trp repressor/replication initiator GO:0043565 CDA09_00010 756c1bdc8ce06a0fb8809dbb2dc032f2 477 Pfam PF00308 Bacterial dnaA protein 142 359 6.8E-88 T 01-11-2018 IPR013317 Chromosomal replication initiator protein DnaA CDA09_00010 756c1bdc8ce06a0fb8809dbb2dc032f2 477 Gene3D G3DSA:3.30.300.180 3 111 6.0E-24 T 01-11-2018 IPR038454 DnaA, N-terminal domain superfamily CDA09_00010 756c1bdc8ce06a0fb8809dbb2dc032f2 477 TIGRFAM TIGR00362 DnaA: chromosomal replication initiator protein DnaA 6 474 4.2E-175 T 01-11-2018 IPR001957 Chromosomal replication control, initiator DnaA GO:0003677|GO:0003688|GO:0005524|GO:0006270|GO:0006275 CDA09_00010 756c1bdc8ce06a0fb8809dbb2dc032f2 477 Gene3D G3DSA:3.40.50.300 129 306 4.7E-48 T 01-11-2018 CDA09_00010 756c1bdc8ce06a0fb8809dbb2dc032f2 477 Hamap MF_00377 Chromosomal replication initiator protein DnaA [dnaA]. 3 476 32.5 T 01-11-2018 IPR001957 Chromosomal replication control, initiator DnaA GO:0003677|GO:0003688|GO:0005524|GO:0006270|GO:0006275 CDA09_00010 756c1bdc8ce06a0fb8809dbb2dc032f2 477 ProSitePatterns PS01008 DnaA protein signature. 435 454 - T 01-11-2018 IPR018312 Chromosomal replication control, initiator DnaA, conserved site GO:0003677|GO:0003688|GO:0005524|GO:0006270|GO:0006275 CDA09_00010 756c1bdc8ce06a0fb8809dbb2dc032f2 477 Gene3D G3DSA:1.10.1750.10 378 476 1.0E-34 T 01-11-2018 IPR010921 Trp repressor/replication initiator GO:0043565 CDA09_00010 756c1bdc8ce06a0fb8809dbb2dc032f2 477 SUPERFAMILY SSF52540 141 354 6.2E-42 T 01-11-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CDA09_00010 756c1bdc8ce06a0fb8809dbb2dc032f2 477 Pfam PF11638 DnaA N-terminal domain 5 65 8.5E-18 T 01-11-2018 IPR024633 DnaA N-terminal domain CDA09_00010 756c1bdc8ce06a0fb8809dbb2dc032f2 477 SMART SM00382 174 305 1.4E-7 T 01-11-2018 IPR003593 AAA+ ATPase domain CDA09_00010 756c1bdc8ce06a0fb8809dbb2dc032f2 477 Pfam PF08299 Bacterial dnaA protein helix-turn-helix 386 454 1.4E-31 T 01-11-2018 IPR013159 Chromosomal replication initiator, DnaA C-terminal GO:0005524|GO:0006270|GO:0006275|GO:0043565 CDA09_00010 756c1bdc8ce06a0fb8809dbb2dc032f2 477 PRINTS PR00051 Bacterial chromosomal replication initiator (DNAA) signature 273 300 3.2E-47 T 01-11-2018 IPR020591 Chromosomal replication control, initiator DnaA-like CDA09_00010 756c1bdc8ce06a0fb8809dbb2dc032f2 477 PRINTS PR00051 Bacterial chromosomal replication initiator (DNAA) signature 175 195 3.2E-47 T 01-11-2018 IPR020591 Chromosomal replication control, initiator DnaA-like CDA09_00010 756c1bdc8ce06a0fb8809dbb2dc032f2 477 PRINTS PR00051 Bacterial chromosomal replication initiator (DNAA) signature 239 253 3.2E-47 T 01-11-2018 IPR020591 Chromosomal replication control, initiator DnaA-like CDA09_00010 756c1bdc8ce06a0fb8809dbb2dc032f2 477 PRINTS PR00051 Bacterial chromosomal replication initiator (DNAA) signature 207 221 3.2E-47 T 01-11-2018 IPR020591 Chromosomal replication control, initiator DnaA-like CDA09_00010 756c1bdc8ce06a0fb8809dbb2dc032f2 477 PRINTS PR00051 Bacterial chromosomal replication initiator (DNAA) signature 435 454 3.2E-47 T 01-11-2018 IPR020591 Chromosomal replication control, initiator DnaA-like CDA09_00010 756c1bdc8ce06a0fb8809dbb2dc032f2 477 SMART SM00760 385 454 2.3E-43 T 01-11-2018 IPR013159 Chromosomal replication initiator, DnaA C-terminal GO:0005524|GO:0006270|GO:0006275|GO:0043565 CDA09_22950 1fe21e6f96d15d225d3a76119af541b3 101 SUPERFAMILY SSF51278 1 101 1.2E-48 T 01-11-2018 IPR036461 Urease, beta subunit superfamily KEGG: 00220+3.5.1.5|KEGG: 00230+3.5.1.5|KEGG: 00791+3.5.1.5|MetaCyc: PWY-5704 CDA09_22950 1fe21e6f96d15d225d3a76119af541b3 101 Gene3D G3DSA:2.10.150.10 1 101 2.2E-49 T 01-11-2018 IPR036461 Urease, beta subunit superfamily KEGG: 00220+3.5.1.5|KEGG: 00230+3.5.1.5|KEGG: 00791+3.5.1.5|MetaCyc: PWY-5704 CDA09_22950 1fe21e6f96d15d225d3a76119af541b3 101 Pfam PF00699 Urease beta subunit 3 99 5.1E-47 T 01-11-2018 IPR002019 Urease, beta subunit KEGG: 00220+3.5.1.5|KEGG: 00230+3.5.1.5|KEGG: 00791+3.5.1.5|MetaCyc: PWY-5704 CDA09_22950 1fe21e6f96d15d225d3a76119af541b3 101 TIGRFAM TIGR00192 urease_beta: urease, beta subunit 1 99 1.6E-46 T 01-11-2018 IPR002019 Urease, beta subunit KEGG: 00220+3.5.1.5|KEGG: 00230+3.5.1.5|KEGG: 00791+3.5.1.5|MetaCyc: PWY-5704 CDA09_22950 1fe21e6f96d15d225d3a76119af541b3 101 Hamap MF_01954 Urease subunit beta [ureB]. 1 101 32.753 T 01-11-2018 IPR002019 Urease, beta subunit KEGG: 00220+3.5.1.5|KEGG: 00230+3.5.1.5|KEGG: 00791+3.5.1.5|MetaCyc: PWY-5704 CDA09_03805 e0daa5d793a54eb7f4b43281a0619eb1 191 PRINTS PR01021 OMPA domain signature 86 108 2.2E-10 T 01-11-2018 IPR006664 Outer membrane protein, bacterial GO:0009279|GO:0016021 CDA09_03805 e0daa5d793a54eb7f4b43281a0619eb1 191 PRINTS PR01021 OMPA domain signature 131 147 2.2E-10 T 01-11-2018 IPR006664 Outer membrane protein, bacterial GO:0009279|GO:0016021 CDA09_03805 e0daa5d793a54eb7f4b43281a0619eb1 191 PRINTS PR01021 OMPA domain signature 116 131 2.2E-10 T 01-11-2018 IPR006664 Outer membrane protein, bacterial GO:0009279|GO:0016021 CDA09_03805 e0daa5d793a54eb7f4b43281a0619eb1 191 Pfam PF00691 OmpA family 97 180 1.1E-19 T 01-11-2018 IPR006665 OmpA-like domain CDA09_03805 e0daa5d793a54eb7f4b43281a0619eb1 191 PRINTS PR01023 Sodium-type flagellar protein MotY precursor signature 169 189 4.8E-8 T 01-11-2018 CDA09_03805 e0daa5d793a54eb7f4b43281a0619eb1 191 PRINTS PR01023 Sodium-type flagellar protein MotY precursor signature 131 148 4.8E-8 T 01-11-2018 CDA09_03805 e0daa5d793a54eb7f4b43281a0619eb1 191 PRINTS PR01023 Sodium-type flagellar protein MotY precursor signature 149 168 4.8E-8 T 01-11-2018 CDA09_03805 e0daa5d793a54eb7f4b43281a0619eb1 191 Gene3D G3DSA:3.30.1330.60 47 189 4.7E-38 T 01-11-2018 IPR036737 OmpA-like domain superfamily CDA09_03805 e0daa5d793a54eb7f4b43281a0619eb1 191 SUPERFAMILY SSF103088 74 188 3.92E-35 T 01-11-2018 IPR036737 OmpA-like domain superfamily CDA09_10765 7a7e0a23d28ea3dd71b74039afe357a3 332 Pfam PF12345 Protein of unknown function (DUF3641) 183 319 1.1E-55 T 01-11-2018 IPR024521 Domain of unknown function DUF3641 CDA09_10765 7a7e0a23d28ea3dd71b74039afe357a3 332 Gene3D G3DSA:3.20.20.70 17 279 7.3E-19 T 01-11-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 CDA09_10765 7a7e0a23d28ea3dd71b74039afe357a3 332 SUPERFAMILY SSF102114 21 317 3.4E-37 T 01-11-2018 CDA09_10765 7a7e0a23d28ea3dd71b74039afe357a3 332 TIGRFAM TIGR04167 rSAM_SeCys: radical SAM/Cys-rich domain protein 16 320 9.8E-137 T 01-11-2018 IPR026351 Radical SAM/Cys-rich domain protein CDA09_10765 7a7e0a23d28ea3dd71b74039afe357a3 332 Pfam PF04055 Radical SAM superfamily 28 163 1.5E-9 T 01-11-2018 IPR007197 Radical SAM GO:0003824|GO:0051536 CDA09_05805 53b1cb06e759b5c27941e8a62b2251b4 168 SUPERFAMILY SSF109854 4 166 4.3E-63 T 01-11-2018 IPR034660 DinB/YfiT-like putative metalloenzymes CDA09_05805 53b1cb06e759b5c27941e8a62b2251b4 168 Gene3D G3DSA:1.20.120.450 1 168 7.0E-60 T 01-11-2018 IPR034660 DinB/YfiT-like putative metalloenzymes CDA09_05805 53b1cb06e759b5c27941e8a62b2251b4 168 Pfam PF09351 Domain of unknown function (DUF1993) 5 165 3.4E-63 T 01-11-2018 IPR018531 Protein of unknown function DUF1993 CDA09_01800 ea36aad9c408572f229c3f2fd81f72f4 156 Hamap MF_00178 6,7-dimethyl-8-ribityllumazine synthase [ribH]. 14 155 27.532 T 01-11-2018 IPR034964 Lumazine synthase GO:0000906|GO:0009231 KEGG: 00740+2.5.1.78|MetaCyc: PWY-6167|MetaCyc: PWY-6168 CDA09_01800 ea36aad9c408572f229c3f2fd81f72f4 156 TIGRFAM TIGR00114 lumazine-synth: 6,7-dimethyl-8-ribityllumazine synthase 19 151 3.3E-39 T 01-11-2018 IPR034964 Lumazine synthase GO:0000906|GO:0009231 KEGG: 00740+2.5.1.78|MetaCyc: PWY-6167|MetaCyc: PWY-6168 CDA09_01800 ea36aad9c408572f229c3f2fd81f72f4 156 Pfam PF00885 6,7-dimethyl-8-ribityllumazine synthase 18 152 2.5E-48 T 01-11-2018 IPR002180 Lumazine/riboflavin synthase GO:0009231|GO:0009349 KEGG: 00740+2.5.1.78|MetaCyc: PWY-6167|MetaCyc: PWY-6168 CDA09_01800 ea36aad9c408572f229c3f2fd81f72f4 156 SUPERFAMILY SSF52121 11 155 5.1E-52 T 01-11-2018 IPR036467 Lumazine/riboflavin synthase superfamily GO:0009231|GO:0009349 KEGG: 00740+2.5.1.78|MetaCyc: PWY-6167|MetaCyc: PWY-6168 CDA09_01800 ea36aad9c408572f229c3f2fd81f72f4 156 Gene3D G3DSA:3.40.50.960 8 156 4.6E-52 T 01-11-2018 IPR036467 Lumazine/riboflavin synthase superfamily GO:0009231|GO:0009349 KEGG: 00740+2.5.1.78|MetaCyc: PWY-6167|MetaCyc: PWY-6168 CDA09_14005 37d33e447da2e4a517b0d4b20371334b 737 TIGRFAM TIGR03743 SXT_TraD: conjugative coupling factor TraD, SXT/TOL subfamily 6 649 1.3E-241 T 01-11-2018 IPR022458 Conjugative coupling factor TraG/TraD CDA09_14005 37d33e447da2e4a517b0d4b20371334b 737 SUPERFAMILY SSF52540 150 649 6.11E-43 T 01-11-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CDA09_14005 37d33e447da2e4a517b0d4b20371334b 737 Gene3D G3DSA:3.40.50.300 149 249 4.4E-8 T 01-11-2018 CDA09_14005 37d33e447da2e4a517b0d4b20371334b 737 Gene3D G3DSA:3.40.50.300 413 656 5.6E-26 T 01-11-2018 CDA09_14005 37d33e447da2e4a517b0d4b20371334b 737 TIGRFAM TIGR03754 conj_TOL_TraD: conjugative coupling factor TraD, PFGI-1 class 6 649 1.3E-292 T 01-11-2018 IPR022503 Conjugative coupling factor TraG/TraD, PFGI-1 CDA09_14005 37d33e447da2e4a517b0d4b20371334b 737 Pfam PF12696 TraM recognition site of TraD and TraG 501 629 5.3E-13 T 01-11-2018 IPR032689 TraD/TraG, TraM recognition site CDA09_06805 fcb79676157feccc916f0a3f70919ad4 481 Gene3D G3DSA:3.30.750.140 335 445 3.5E-33 T 01-11-2018 IPR038610 FliK-like, C-terminal domain superfamily CDA09_06805 fcb79676157feccc916f0a3f70919ad4 481 PRINTS PR01007 Flagellar hook-length control protein signature 189 212 2.9E-8 T 01-11-2018 IPR001635 Flagellar hook-length control protein FliK GO:0009424|GO:0044780 CDA09_06805 fcb79676157feccc916f0a3f70919ad4 481 PRINTS PR01007 Flagellar hook-length control protein signature 401 424 2.9E-8 T 01-11-2018 IPR001635 Flagellar hook-length control protein FliK GO:0009424|GO:0044780 CDA09_06805 fcb79676157feccc916f0a3f70919ad4 481 PRINTS PR01007 Flagellar hook-length control protein signature 368 386 2.9E-8 T 01-11-2018 IPR001635 Flagellar hook-length control protein FliK GO:0009424|GO:0044780 CDA09_06805 fcb79676157feccc916f0a3f70919ad4 481 Pfam PF02120 Flagellar hook-length control protein FliK 353 435 1.3E-22 T 01-11-2018 IPR021136 Flagellar hook-length control protein-like, C-terminal CDA09_06890 87c826d6c0ef9e9d4ed5d676d06fa024 391 Gene3D G3DSA:3.30.70.2120 173 288 8.8E-93 T 01-11-2018 CDA09_06890 87c826d6c0ef9e9d4ed5d676d06fa024 391 SUPERFAMILY SSF64518 1 390 8.11E-107 T 01-11-2018 CDA09_06890 87c826d6c0ef9e9d4ed5d676d06fa024 391 PRINTS PR00207 Flagellin signature 37 54 2.5E-28 T 01-11-2018 IPR001492 Flagellin GO:0005198|GO:0009420|GO:0071973 CDA09_06890 87c826d6c0ef9e9d4ed5d676d06fa024 391 PRINTS PR00207 Flagellin signature 76 95 2.5E-28 T 01-11-2018 IPR001492 Flagellin GO:0005198|GO:0009420|GO:0071973 CDA09_06890 87c826d6c0ef9e9d4ed5d676d06fa024 391 PRINTS PR00207 Flagellin signature 111 134 2.5E-28 T 01-11-2018 IPR001492 Flagellin GO:0005198|GO:0009420|GO:0071973 CDA09_06890 87c826d6c0ef9e9d4ed5d676d06fa024 391 Pfam PF07196 Flagellin hook IN motif 195 249 2.7E-5 T 01-11-2018 IPR010810 Flagellin hook, IN motif GO:0006928|GO:0009288|GO:0044781 CDA09_06890 87c826d6c0ef9e9d4ed5d676d06fa024 391 Gene3D G3DSA:1.10.8.410 340 390 4.6E-26 T 01-11-2018 CDA09_06890 87c826d6c0ef9e9d4ed5d676d06fa024 391 Pfam PF00700 Bacterial flagellin C-terminal helical region 307 389 1.9E-26 T 01-11-2018 IPR001029 Flagellin, D0/D1 domain GO:0005198|GO:0071973 CDA09_06890 87c826d6c0ef9e9d4ed5d676d06fa024 391 Pfam PF00669 Bacterial flagellin N-terminal helical region 5 143 2.0E-45 T 01-11-2018 IPR001029 Flagellin, D0/D1 domain GO:0005198|GO:0071973 CDA09_06890 87c826d6c0ef9e9d4ed5d676d06fa024 391 Gene3D G3DSA:1.20.1330.10 44 339 8.8E-93 T 01-11-2018 CDA09_21160 ee77da7f3ef7c5062cacfd28ff4e9d33 1235 SUPERFAMILY SSF82282 8 402 1.83E-117 T 01-11-2018 IPR036589 Homocysteine-binding domain superfamily Reactome: R-HSA-1614635 CDA09_21160 ee77da7f3ef7c5062cacfd28ff4e9d33 1235 Gene3D G3DSA:3.10.196.10 919 1235 2.2E-133 T 01-11-2018 IPR037010 Vitamin B12-dependent methionine synthase, activation domain superfamily GO:0008705|GO:0009086 KEGG: 00270+2.1.1.13|KEGG: 00450+2.1.1.13|KEGG: 00670+2.1.1.13|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-7977|Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 CDA09_21160 ee77da7f3ef7c5062cacfd28ff4e9d33 1235 Pfam PF02310 B12 binding domain 760 851 5.7E-20 T 01-11-2018 IPR006158 Cobalamin (vitamin B12)-binding domain GO:0031419|GO:0046872 Reactome: R-HSA-196741 CDA09_21160 ee77da7f3ef7c5062cacfd28ff4e9d33 1235 SUPERFAMILY SSF47644 658 749 2.09E-26 T 01-11-2018 IPR036594 Methionine synthase domain Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 CDA09_21160 ee77da7f3ef7c5062cacfd28ff4e9d33 1235 Gene3D G3DSA:3.40.50.280 756 907 2.2E-55 T 01-11-2018 CDA09_21160 ee77da7f3ef7c5062cacfd28ff4e9d33 1235 SUPERFAMILY SSF56507 914 1235 7.98E-126 T 01-11-2018 IPR037010 Vitamin B12-dependent methionine synthase, activation domain superfamily GO:0008705|GO:0009086 KEGG: 00270+2.1.1.13|KEGG: 00450+2.1.1.13|KEGG: 00670+2.1.1.13|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-7977|Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 CDA09_21160 ee77da7f3ef7c5062cacfd28ff4e9d33 1235 Pfam PF02965 Vitamin B12 dependent methionine synthase, activation domain 950 1221 1.8E-121 T 01-11-2018 IPR004223 Vitamin B12-dependent methionine synthase, activation domain GO:0008705|GO:0009086 KEGG: 00270+2.1.1.13|KEGG: 00450+2.1.1.13|KEGG: 00670+2.1.1.13|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-7977|Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 CDA09_21160 ee77da7f3ef7c5062cacfd28ff4e9d33 1235 Pfam PF02607 B12 binding domain 665 742 6.2E-25 T 01-11-2018 IPR003759 Cobalamin (vitamin B12)-binding module, cap domain Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 CDA09_21160 ee77da7f3ef7c5062cacfd28ff4e9d33 1235 PIRSF PIRSF000381 2 1208 0.0 T 01-11-2018 IPR011822 Cobalamin-dependent methionine synthase GO:0008270|GO:0008705|GO:0009086|GO:0031419 KEGG: 00270+2.1.1.13|KEGG: 00450+2.1.1.13|KEGG: 00670+2.1.1.13|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-7977|Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 CDA09_21160 ee77da7f3ef7c5062cacfd28ff4e9d33 1235 SMART SM01018 663 750 1.0E-42 T 01-11-2018 IPR003759 Cobalamin (vitamin B12)-binding module, cap domain Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 CDA09_21160 ee77da7f3ef7c5062cacfd28ff4e9d33 1235 TIGRFAM TIGR02082 metH: methionine synthase 14 1205 0.0 T 01-11-2018 IPR011822 Cobalamin-dependent methionine synthase GO:0008270|GO:0008705|GO:0009086|GO:0031419 KEGG: 00270+2.1.1.13|KEGG: 00450+2.1.1.13|KEGG: 00670+2.1.1.13|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-7977|Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 CDA09_21160 ee77da7f3ef7c5062cacfd28ff4e9d33 1235 Gene3D G3DSA:1.10.1240.10 656 747 1.2E-36 T 01-11-2018 IPR036594 Methionine synthase domain Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 CDA09_21160 ee77da7f3ef7c5062cacfd28ff4e9d33 1235 Gene3D G3DSA:3.20.20.330 2 342 1.1E-126 T 01-11-2018 IPR036589 Homocysteine-binding domain superfamily Reactome: R-HSA-1614635 CDA09_21160 ee77da7f3ef7c5062cacfd28ff4e9d33 1235 SUPERFAMILY SSF51717 359 635 7.72E-85 T 01-11-2018 IPR011005 Dihydropteroate synthase-like GO:0044237 Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 CDA09_21160 ee77da7f3ef7c5062cacfd28ff4e9d33 1235 Gene3D G3DSA:3.20.20.20 343 650 1.8E-123 T 01-11-2018 IPR011005 Dihydropteroate synthase-like GO:0044237 Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 CDA09_21160 ee77da7f3ef7c5062cacfd28ff4e9d33 1235 Pfam PF02574 Homocysteine S-methyltransferase 18 328 5.6E-78 T 01-11-2018 IPR003726 Homocysteine-binding domain Reactome: R-HSA-1614635 CDA09_21160 ee77da7f3ef7c5062cacfd28ff4e9d33 1235 Pfam PF00809 Pterin binding enzyme 363 606 4.6E-52 T 01-11-2018 IPR000489 Pterin-binding domain GO:0042558 Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 CDA09_21160 ee77da7f3ef7c5062cacfd28ff4e9d33 1235 SUPERFAMILY SSF52242 755 906 2.88E-47 T 01-11-2018 IPR036724 Cobalamin-binding domain superfamily GO:0031419|GO:0046872 Reactome: R-HSA-196741 CDA09_21160 ee77da7f3ef7c5062cacfd28ff4e9d33 1235 Gene3D G3DSA:1.10.288.10 948 1105 2.2E-133 T 01-11-2018 CDA09_14985 554ca995d1439cc5516f83126b42ef4e 242 Gene3D G3DSA:3.40.1280.10 5 169 6.8E-58 T 01-11-2018 IPR029026 tRNA (guanine-N1-)-methyltransferase, N-terminal CDA09_14985 554ca995d1439cc5516f83126b42ef4e 242 Gene3D G3DSA:1.10.8.590 177 239 1.7E-25 T 01-11-2018 CDA09_14985 554ca995d1439cc5516f83126b42ef4e 242 PIRSF PIRSF004808 5 242 1.9E-67 T 01-11-2018 IPR004384 RNA methyltransferase TrmJ/LasT GO:0006396|GO:0008173 CDA09_14985 554ca995d1439cc5516f83126b42ef4e 242 TIGRFAM TIGR00050 rRNA_methyl_1: RNA methyltransferase, TrmH family, group 1 8 240 3.0E-58 T 01-11-2018 IPR004384 RNA methyltransferase TrmJ/LasT GO:0006396|GO:0008173 CDA09_14985 554ca995d1439cc5516f83126b42ef4e 242 Pfam PF00588 SpoU rRNA Methylase family 10 159 8.8E-32 T 01-11-2018 IPR001537 tRNA/rRNA methyltransferase, SpoU type GO:0003723|GO:0006396|GO:0008173 CDA09_14985 554ca995d1439cc5516f83126b42ef4e 242 SUPERFAMILY SSF75217 9 169 1.11E-33 T 01-11-2018 IPR029028 Alpha/beta knot methyltransferases CDA09_21870 1b5373d65ed263e3c952f71a3e10aa93 218 ProSitePatterns PS00622 LuxR-type HTH domain signature. 160 187 - T 01-11-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 CDA09_21870 1b5373d65ed263e3c952f71a3e10aa93 218 SUPERFAMILY SSF52172 8 167 1.85E-27 T 01-11-2018 IPR011006 CheY-like superfamily CDA09_21870 1b5373d65ed263e3c952f71a3e10aa93 218 Gene3D G3DSA:1.10.10.10 137 201 8.5E-20 T 01-11-2018 IPR036388 Winged helix-like DNA-binding domain superfamily CDA09_21870 1b5373d65ed263e3c952f71a3e10aa93 218 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 146 160 4.0E-12 T 01-11-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 CDA09_21870 1b5373d65ed263e3c952f71a3e10aa93 218 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 176 188 4.0E-12 T 01-11-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 CDA09_21870 1b5373d65ed263e3c952f71a3e10aa93 218 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 160 176 4.0E-12 T 01-11-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 CDA09_21870 1b5373d65ed263e3c952f71a3e10aa93 218 Gene3D G3DSA:3.40.50.2300 3 135 7.2E-42 T 01-11-2018 CDA09_21870 1b5373d65ed263e3c952f71a3e10aa93 218 Pfam PF00072 Response regulator receiver domain 10 120 4.1E-21 T 01-11-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 CDA09_21870 1b5373d65ed263e3c952f71a3e10aa93 218 SMART SM00421 143 200 1.4E-21 T 01-11-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 CDA09_21870 1b5373d65ed263e3c952f71a3e10aa93 218 Pfam PF00196 Bacterial regulatory proteins, luxR family 145 199 5.3E-19 T 01-11-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 CDA09_21870 1b5373d65ed263e3c952f71a3e10aa93 218 SMART SM00448 8 119 5.3E-19 T 01-11-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 CDA09_16195 a979799cd6a17a6eff148d87fc4b89e7 349 Pfam PF00146 NADH dehydrogenase 24 337 8.8E-127 T 01-11-2018 IPR001694 NADH:ubiquinone oxidoreductase, subunit 1/F420H2 oxidoreductase subunit H GO:0016020|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 CDA09_16195 a979799cd6a17a6eff148d87fc4b89e7 349 ProSitePatterns PS00668 Respiratory-chain NADH dehydrogenase subunit 1 signature 2. 229 242 - T 01-11-2018 IPR018086 NADH:ubiquinone oxidoreductase, subunit 1, conserved site GO:0016020|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 CDA09_16195 a979799cd6a17a6eff148d87fc4b89e7 349 Hamap MF_01350 NAD(P)H-quinone oxidoreductase subunit 1, chloroplastic [ndhA]. 17 344 25.048 T 01-11-2018 IPR001694 NADH:ubiquinone oxidoreductase, subunit 1/F420H2 oxidoreductase subunit H GO:0016020|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 CDA09_16195 a979799cd6a17a6eff148d87fc4b89e7 349 ProSitePatterns PS00667 Respiratory-chain NADH dehydrogenase subunit 1 signature 1. 63 78 - T 01-11-2018 IPR018086 NADH:ubiquinone oxidoreductase, subunit 1, conserved site GO:0016020|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 CDA09_04550 03d2a30303c1897bb30254de8063e087 384 SUPERFAMILY SSF53335 168 321 1.45E-30 T 01-11-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase CDA09_04550 03d2a30303c1897bb30254de8063e087 384 ProSitePatterns PS00092 N-6 Adenine-specific DNA methylases signature. 272 278 - T 01-11-2018 IPR002052 DNA methylase, N-6 adenine-specific, conserved site GO:0003676|GO:0008168|GO:0032259 CDA09_04550 03d2a30303c1897bb30254de8063e087 384 Pfam PF05175 Methyltransferase small domain 175 321 3.3E-12 T 01-11-2018 IPR007848 Methyltransferase small domain GO:0008168 CDA09_04550 03d2a30303c1897bb30254de8063e087 384 Gene3D G3DSA:3.40.50.150 189 365 1.1E-28 T 01-11-2018 CDA09_06935 6c769ed4961405d85aabd853f6bff4c1 623 Pfam PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain 377 524 9.3E-25 T 01-11-2018 IPR011766 Thiamine pyrophosphate enzyme, C-terminal TPP-binding GO:0003824|GO:0030976 CDA09_06935 6c769ed4961405d85aabd853f6bff4c1 623 SUPERFAMILY SSF52518 349 564 9.51E-35 T 01-11-2018 IPR029061 Thiamin diphosphate-binding fold CDA09_06935 6c769ed4961405d85aabd853f6bff4c1 623 Pfam PF13237 4Fe-4S dicluster domain 544 601 2.1E-9 T 01-11-2018 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain CDA09_06935 6c769ed4961405d85aabd853f6bff4c1 623 Gene3D G3DSA:3.40.50.970 2 188 1.5E-53 T 01-11-2018 CDA09_06935 6c769ed4961405d85aabd853f6bff4c1 623 PIRSF PIRSF006439 2 613 4.1E-231 T 01-11-2018 IPR017721 Indolepyruvate ferredoxin oxidoreductase, alpha subunit GO:0043805|GO:0055114 CDA09_06935 6c769ed4961405d85aabd853f6bff4c1 623 SUPERFAMILY SSF52518 12 213 1.18E-56 T 01-11-2018 IPR029061 Thiamin diphosphate-binding fold CDA09_06935 6c769ed4961405d85aabd853f6bff4c1 623 Gene3D G3DSA:3.30.70.3270 538 620 1.7E-9 T 01-11-2018 CDA09_06935 6c769ed4961405d85aabd853f6bff4c1 623 SUPERFAMILY SSF54862 540 611 8.79E-10 T 01-11-2018 CDA09_06935 6c769ed4961405d85aabd853f6bff4c1 623 Pfam PF01855 Pyruvate flavodoxin/ferredoxin oxidoreductase, thiamine diP-bdg 24 180 9.2E-15 T 01-11-2018 IPR002880 Pyruvate flavodoxin/ferredoxin oxidoreductase, N-terminal GO:0016491|GO:0055114 CDA09_06935 6c769ed4961405d85aabd853f6bff4c1 623 Gene3D G3DSA:3.40.50.970 364 537 5.6E-23 T 01-11-2018 CDA09_11085 e181cf26c6f2fc2b1b0948289393bb23 369 SUPERFAMILY SSF63380 17 122 5.88E-30 T 01-11-2018 IPR017938 Riboflavin synthase-like beta-barrel CDA09_11085 e181cf26c6f2fc2b1b0948289393bb23 369 PRINTS PR00371 Flavoprotein pyridine nucleotide cytochrome reductase signature 71 78 4.5E-5 T 01-11-2018 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase GO:0016491|GO:0055114 CDA09_11085 e181cf26c6f2fc2b1b0948289393bb23 369 PRINTS PR00371 Flavoprotein pyridine nucleotide cytochrome reductase signature 131 150 4.5E-5 T 01-11-2018 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase GO:0016491|GO:0055114 CDA09_11085 e181cf26c6f2fc2b1b0948289393bb23 369 PRINTS PR00371 Flavoprotein pyridine nucleotide cytochrome reductase signature 168 179 4.5E-5 T 01-11-2018 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase GO:0016491|GO:0055114 CDA09_11085 e181cf26c6f2fc2b1b0948289393bb23 369 PRINTS PR00371 Flavoprotein pyridine nucleotide cytochrome reductase signature 224 232 4.5E-5 T 01-11-2018 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase GO:0016491|GO:0055114 CDA09_11085 e181cf26c6f2fc2b1b0948289393bb23 369 SUPERFAMILY SSF52343 111 254 6.81E-36 T 01-11-2018 IPR039261 Ferredoxin-NADP reductase (FNR), nucleotide-binding domain CDA09_11085 e181cf26c6f2fc2b1b0948289393bb23 369 Pfam PF00111 2Fe-2S iron-sulfur cluster binding domain 292 361 1.7E-13 T 01-11-2018 IPR001041 2Fe-2S ferredoxin-type iron-sulfur binding domain GO:0009055|GO:0051536 CDA09_11085 e181cf26c6f2fc2b1b0948289393bb23 369 Gene3D G3DSA:3.40.50.80 122 261 3.8E-29 T 01-11-2018 IPR039261 Ferredoxin-NADP reductase (FNR), nucleotide-binding domain CDA09_11085 e181cf26c6f2fc2b1b0948289393bb23 369 Gene3D G3DSA:3.10.20.30 262 369 3.1E-24 T 01-11-2018 IPR012675 Beta-grasp domain superfamily CDA09_11085 e181cf26c6f2fc2b1b0948289393bb23 369 Pfam PF00175 Oxidoreductase NAD-binding domain 132 238 6.2E-14 T 01-11-2018 IPR001433 Oxidoreductase FAD/NAD(P)-binding GO:0016491|GO:0055114 CDA09_11085 e181cf26c6f2fc2b1b0948289393bb23 369 SUPERFAMILY SSF54292 248 368 6.69E-28 T 01-11-2018 IPR036010 2Fe-2S ferredoxin-like superfamily GO:0009055|GO:0051536 CDA09_11085 e181cf26c6f2fc2b1b0948289393bb23 369 ProSitePatterns PS00197 2Fe-2S ferredoxin-type iron-sulfur binding region signature. 319 327 - T 01-11-2018 IPR006058 2Fe-2S ferredoxin, iron-sulphur binding site GO:0051537 CDA09_11085 e181cf26c6f2fc2b1b0948289393bb23 369 Pfam PF00970 Oxidoreductase FAD-binding domain 30 121 9.4E-19 T 01-11-2018 IPR008333 Flavoprotein pyridine nucleotide cytochrome reductase-like, FAD-binding domain Reactome: R-HSA-1237044 CDA09_11085 e181cf26c6f2fc2b1b0948289393bb23 369 PRINTS PR00406 Cytochrome B5 reductase signature 71 78 7.5E-11 T 01-11-2018 IPR001834 NADH:cytochrome b5 reductase (CBR) GO:0016491|GO:0055114 Reactome: R-HSA-1237044 CDA09_11085 e181cf26c6f2fc2b1b0948289393bb23 369 PRINTS PR00406 Cytochrome B5 reductase signature 224 232 7.5E-11 T 01-11-2018 IPR001834 NADH:cytochrome b5 reductase (CBR) GO:0016491|GO:0055114 Reactome: R-HSA-1237044 CDA09_11085 e181cf26c6f2fc2b1b0948289393bb23 369 PRINTS PR00406 Cytochrome B5 reductase signature 168 179 7.5E-11 T 01-11-2018 IPR001834 NADH:cytochrome b5 reductase (CBR) GO:0016491|GO:0055114 Reactome: R-HSA-1237044 CDA09_11085 e181cf26c6f2fc2b1b0948289393bb23 369 PRINTS PR00406 Cytochrome B5 reductase signature 108 122 7.5E-11 T 01-11-2018 IPR001834 NADH:cytochrome b5 reductase (CBR) GO:0016491|GO:0055114 Reactome: R-HSA-1237044 CDA09_11085 e181cf26c6f2fc2b1b0948289393bb23 369 PRINTS PR00406 Cytochrome B5 reductase signature 131 150 7.5E-11 T 01-11-2018 IPR001834 NADH:cytochrome b5 reductase (CBR) GO:0016491|GO:0055114 Reactome: R-HSA-1237044 CDA09_11085 e181cf26c6f2fc2b1b0948289393bb23 369 Gene3D G3DSA:2.40.30.10 18 121 5.5E-27 T 01-11-2018 CDA09_16680 fd1155955128e4b45b006f9b719dc7c9 488 Pfam PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit 131 276 1.3E-47 T 01-11-2018 IPR011538 NADH-ubiquinone oxidoreductase 51kDa subunit, FMN-binding domain Reactome: R-HSA-611105|Reactome: R-HSA-6799198 CDA09_16680 fd1155955128e4b45b006f9b719dc7c9 488 Pfam PF13183 4Fe-4S dicluster domain 367 422 1.6E-7 T 01-11-2018 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain CDA09_16680 fd1155955128e4b45b006f9b719dc7c9 488 Pfam PF10531 SLBB domain 289 337 4.0E-13 T 01-11-2018 IPR019554 Soluble ligand binding domain Reactome: R-HSA-611105|Reactome: R-HSA-6799198 CDA09_16680 fd1155955128e4b45b006f9b719dc7c9 488 Hamap MF_00461 Ion-translocating oxidoreductase complex subunit C [rsxC]. 1 488 163.508 T 01-11-2018 IPR010208 Ion-translocating oxidoreductase complex, subunit RnfC/RsxC GO:0009055|GO:0016020|GO:0051539 CDA09_16680 fd1155955128e4b45b006f9b719dc7c9 488 SUPERFAMILY SSF142019 86 296 6.8E-56 T 01-11-2018 IPR037225 NADH-ubiquinone oxidoreductase 51kDa subunit, FMN-binding domain superfamily Reactome: R-HSA-611105|Reactome: R-HSA-6799198 CDA09_16680 fd1155955128e4b45b006f9b719dc7c9 488 Gene3D G3DSA:3.40.50.11540 136 285 7.5E-14 T 01-11-2018 IPR037225 NADH-ubiquinone oxidoreductase 51kDa subunit, FMN-binding domain superfamily Reactome: R-HSA-611105|Reactome: R-HSA-6799198 CDA09_16680 fd1155955128e4b45b006f9b719dc7c9 488 Gene3D G3DSA:1.10.1060.10 357 435 7.7E-11 T 01-11-2018 IPR009051 Alpha-helical ferredoxin GO:0051536 CDA09_16680 fd1155955128e4b45b006f9b719dc7c9 488 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 408 419 - T 01-11-2018 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site CDA09_16680 fd1155955128e4b45b006f9b719dc7c9 488 SUPERFAMILY SSF46548 330 437 6.28E-20 T 01-11-2018 IPR009051 Alpha-helical ferredoxin GO:0051536 CDA09_16680 fd1155955128e4b45b006f9b719dc7c9 488 TIGRFAM TIGR01945 rnfC: electron transport complex, RnfABCDGE type, C subunit 4 436 1.2E-170 T 01-11-2018 IPR010208 Ion-translocating oxidoreductase complex, subunit RnfC/RsxC GO:0009055|GO:0016020|GO:0051539 CDA09_16680 fd1155955128e4b45b006f9b719dc7c9 488 Pfam PF13375 RnfC Barrel sandwich hybrid domain 6 105 2.5E-31 T 01-11-2018 IPR026902 RnfC Barrel sandwich hybrid domain CDA09_08900 feb85792fcd30fd6cbeafc6bc5b5244c 141 SUPERFAMILY SSF46626 41 137 1.28E-18 T 01-11-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 CDA09_08900 feb85792fcd30fd6cbeafc6bc5b5244c 141 Pfam PF00034 Cytochrome c 50 126 2.4E-12 T 01-11-2018 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 Reactome: R-HSA-111457|Reactome: R-HSA-111458|Reactome: R-HSA-111459|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 CDA09_08900 feb85792fcd30fd6cbeafc6bc5b5244c 141 Gene3D G3DSA:1.10.760.10 1 141 1.1E-41 T 01-11-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 CDA09_00160 ea824815f701712e8c9717e54c4fb750 980 Pfam PF00072 Response regulator receiver domain 3 107 9.0E-13 T 01-11-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 CDA09_00160 ea824815f701712e8c9717e54c4fb750 980 SMART SM00091 139 209 33.0 T 01-11-2018 IPR000014 PAS domain CDA09_00160 ea824815f701712e8c9717e54c4fb750 980 SMART SM00091 430 496 3.0E-5 T 01-11-2018 IPR000014 PAS domain CDA09_00160 ea824815f701712e8c9717e54c4fb750 980 Pfam PF00563 EAL domain 733 968 3.1E-76 T 01-11-2018 IPR001633 EAL domain CDA09_00160 ea824815f701712e8c9717e54c4fb750 980 Gene3D G3DSA:3.30.70.270 554 730 1.0E-58 T 01-11-2018 CDA09_00160 ea824815f701712e8c9717e54c4fb750 980 Pfam PF13185 GAF domain 282 421 1.8E-14 T 01-11-2018 IPR003018 GAF domain GO:0005515 CDA09_00160 ea824815f701712e8c9717e54c4fb750 980 SMART SM00086 502 544 3.9E-5 T 01-11-2018 IPR001610 PAC motif CDA09_00160 ea824815f701712e8c9717e54c4fb750 980 SMART SM00086 214 256 1.2E-6 T 01-11-2018 IPR001610 PAC motif CDA09_00160 ea824815f701712e8c9717e54c4fb750 980 Gene3D G3DSA:3.30.450.20 130 254 1.8E-21 T 01-11-2018 CDA09_00160 ea824815f701712e8c9717e54c4fb750 980 Pfam PF08447 PAS fold 167 249 8.4E-15 T 01-11-2018 IPR013655 PAS fold-3 GO:0005515 CDA09_00160 ea824815f701712e8c9717e54c4fb750 980 SMART SM00052 727 973 8.0E-132 T 01-11-2018 IPR001633 EAL domain CDA09_00160 ea824815f701712e8c9717e54c4fb750 980 SUPERFAMILY SSF141868 732 979 1.03E-94 T 01-11-2018 IPR035919 EAL domain superfamily CDA09_00160 ea824815f701712e8c9717e54c4fb750 980 SUPERFAMILY SSF55781 282 433 3.93E-23 T 01-11-2018 CDA09_00160 ea824815f701712e8c9717e54c4fb750 980 SMART SM00065 278 430 8.2E-8 T 01-11-2018 IPR003018 GAF domain GO:0005515 CDA09_00160 ea824815f701712e8c9717e54c4fb750 980 SMART SM00267 544 717 9.4E-67 T 01-11-2018 IPR000160 GGDEF domain CDA09_00160 ea824815f701712e8c9717e54c4fb750 980 Gene3D G3DSA:3.30.450.20 431 553 2.9E-34 T 01-11-2018 CDA09_00160 ea824815f701712e8c9717e54c4fb750 980 SUPERFAMILY SSF52172 1 154 2.85E-20 T 01-11-2018 IPR011006 CheY-like superfamily CDA09_00160 ea824815f701712e8c9717e54c4fb750 980 SMART SM00448 1 117 2.5E-16 T 01-11-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 CDA09_00160 ea824815f701712e8c9717e54c4fb750 980 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 167 260 9.9E-8 T 01-11-2018 IPR000014 PAS domain CDA09_00160 ea824815f701712e8c9717e54c4fb750 980 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 434 551 6.7E-19 T 01-11-2018 IPR000014 PAS domain CDA09_00160 ea824815f701712e8c9717e54c4fb750 980 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 551 715 6.6E-42 T 01-11-2018 IPR000160 GGDEF domain CDA09_00160 ea824815f701712e8c9717e54c4fb750 980 SUPERFAMILY SSF55785 158 259 5.76E-16 T 01-11-2018 IPR035965 PAS domain superfamily CDA09_00160 ea824815f701712e8c9717e54c4fb750 980 Pfam PF13426 PAS domain 441 542 1.8E-14 T 01-11-2018 IPR000014 PAS domain CDA09_00160 ea824815f701712e8c9717e54c4fb750 980 SUPERFAMILY SSF55073 560 718 1.73E-46 T 01-11-2018 IPR029787 Nucleotide cyclase CDA09_00160 ea824815f701712e8c9717e54c4fb750 980 Pfam PF00990 Diguanylate cyclase, GGDEF domain 555 712 5.0E-50 T 01-11-2018 IPR000160 GGDEF domain CDA09_00160 ea824815f701712e8c9717e54c4fb750 980 PIRSF PIRSF005925 427 550 1.7E-12 T 01-11-2018 IPR012226 Diguanylate cyclase/phosphodiesterase CDA09_00160 ea824815f701712e8c9717e54c4fb750 980 PIRSF PIRSF005925 170 435 2.4E-38 T 01-11-2018 IPR012226 Diguanylate cyclase/phosphodiesterase CDA09_00160 ea824815f701712e8c9717e54c4fb750 980 PIRSF PIRSF005925 543 980 3.9E-139 T 01-11-2018 IPR012226 Diguanylate cyclase/phosphodiesterase CDA09_00160 ea824815f701712e8c9717e54c4fb750 980 SUPERFAMILY SSF55785 435 542 7.15E-28 T 01-11-2018 IPR035965 PAS domain superfamily CDA09_00160 ea824815f701712e8c9717e54c4fb750 980 Gene3D G3DSA:3.40.50.2300 1 125 3.2E-17 T 01-11-2018 CDA09_00160 ea824815f701712e8c9717e54c4fb750 980 Gene3D G3DSA:3.30.450.40 277 430 8.9E-27 T 01-11-2018 IPR029016 GAF-like domain superfamily CDA09_00160 ea824815f701712e8c9717e54c4fb750 980 Gene3D G3DSA:3.20.20.450 731 980 1.7E-108 T 01-11-2018 IPR035919 EAL domain superfamily CDA09_13220 c5039b588d0163c820ae2f58594f2cbd 129 PIRSF PIRSF000178 1 129 5.5E-29 T 01-11-2018 IPR014314 Succinate dehydrogenase, cytochrome b556 subunit GO:0000104|GO:0006099|GO:0045281 Reactome: R-HSA-611105|Reactome: R-HSA-71403 CDA09_13220 c5039b588d0163c820ae2f58594f2cbd 129 Pfam PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit 7 124 6.7E-30 T 01-11-2018 IPR000701 Succinate dehydrogenase/fumarate reductase type B, transmembrane subunit GO:0016627 Reactome: R-HSA-611105|Reactome: R-HSA-71403 CDA09_13220 c5039b588d0163c820ae2f58594f2cbd 129 SUPERFAMILY SSF81343 5 129 1.24E-31 T 01-11-2018 IPR034804 Fumarate reductase/succinate dehydrogenase, transmembrane subunit GO:0016020 Reactome: R-HSA-611105|Reactome: R-HSA-71403 CDA09_13220 c5039b588d0163c820ae2f58594f2cbd 129 TIGRFAM TIGR02970 succ_dehyd_cytB: succinate dehydrogenase, cytochrome b556 subunit 8 126 3.6E-40 T 01-11-2018 IPR014314 Succinate dehydrogenase, cytochrome b556 subunit GO:0000104|GO:0006099|GO:0045281 Reactome: R-HSA-611105|Reactome: R-HSA-71403 CDA09_13220 c5039b588d0163c820ae2f58594f2cbd 129 Gene3D G3DSA:1.20.1300.10 3 129 2.0E-40 T 01-11-2018 IPR034804 Fumarate reductase/succinate dehydrogenase, transmembrane subunit GO:0016020 Reactome: R-HSA-611105|Reactome: R-HSA-71403 CDA09_14860 f5657d0c7024d41463ea280e61cb9558 150 Pfam PF10614 Type VIII secretion system (T8SS), CsgF protein 12 146 2.1E-30 T 01-11-2018 IPR018893 Type VIII secretion system, CsgF CDA09_03140 62dfdbf8973184c6c52817033f7ceca7 297 Gene3D G3DSA:3.40.190.10 93 284 1.3E-43 T 01-11-2018 CDA09_03140 62dfdbf8973184c6c52817033f7ceca7 297 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 5 62 4.3E-19 T 01-11-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 CDA09_03140 62dfdbf8973184c6c52817033f7ceca7 297 Gene3D G3DSA:3.40.190.10 166 266 1.3E-43 T 01-11-2018 CDA09_03140 62dfdbf8973184c6c52817033f7ceca7 297 SUPERFAMILY SSF53850 93 296 5.57E-28 T 01-11-2018 CDA09_03140 62dfdbf8973184c6c52817033f7ceca7 297 Gene3D G3DSA:1.10.10.10 1 88 1.8E-24 T 01-11-2018 IPR036388 Winged helix-like DNA-binding domain superfamily CDA09_03140 62dfdbf8973184c6c52817033f7ceca7 297 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 29 39 3.1E-7 T 01-11-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 CDA09_03140 62dfdbf8973184c6c52817033f7ceca7 297 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 18 29 3.1E-7 T 01-11-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 CDA09_03140 62dfdbf8973184c6c52817033f7ceca7 297 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 39 50 3.1E-7 T 01-11-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 CDA09_03140 62dfdbf8973184c6c52817033f7ceca7 297 SUPERFAMILY SSF46785 2 111 3.08E-22 T 01-11-2018 IPR036390 Winged helix DNA-binding domain superfamily CDA09_03140 62dfdbf8973184c6c52817033f7ceca7 297 Pfam PF03466 LysR substrate binding domain 93 294 3.6E-25 T 01-11-2018 IPR005119 LysR, substrate-binding CDA09_16920 7f9f764fdb175621f4f58de1371bf429 197 Pfam PF07963 Prokaryotic N-terminal methylation motif 12 36 3.5E-8 T 01-11-2018 IPR012902 Prokaryotic N-terminal methylation site CDA09_16920 7f9f764fdb175621f4f58de1371bf429 197 TIGRFAM TIGR02523 type_IV_pilV: type IV pilus modification protein PilV 14 124 7.2E-19 T 01-11-2018 IPR013362 Pilus modification type IV, PilV CDA09_16920 7f9f764fdb175621f4f58de1371bf429 197 TIGRFAM TIGR02532 IV_pilin_GFxxxE: prepilin-type N-terminal cleavage/methylation domain 14 36 1.4E-6 T 01-11-2018 IPR012902 Prokaryotic N-terminal methylation site CDA09_06830 be46c666cee6af8080246e03ae18089c 552 PIRSF PIRSF004862 15 549 2.9E-145 T 01-11-2018 IPR000067 Flagellar M-ring protein FliF GO:0003774|GO:0009431|GO:0071973 CDA09_06830 be46c666cee6af8080246e03ae18089c 552 Pfam PF08345 Flagellar M-ring protein C-terminal 261 437 1.0E-50 T 01-11-2018 IPR013556 Flagellar M-ring C-terminal CDA09_06830 be46c666cee6af8080246e03ae18089c 552 PRINTS PR01009 Flagellar M-ring protein signature 160 174 8.2E-40 T 01-11-2018 IPR000067 Flagellar M-ring protein FliF GO:0003774|GO:0009431|GO:0071973 CDA09_06830 be46c666cee6af8080246e03ae18089c 552 PRINTS PR01009 Flagellar M-ring protein signature 274 292 8.2E-40 T 01-11-2018 IPR000067 Flagellar M-ring protein FliF GO:0003774|GO:0009431|GO:0071973 CDA09_06830 be46c666cee6af8080246e03ae18089c 552 PRINTS PR01009 Flagellar M-ring protein signature 361 385 8.2E-40 T 01-11-2018 IPR000067 Flagellar M-ring protein FliF GO:0003774|GO:0009431|GO:0071973 CDA09_06830 be46c666cee6af8080246e03ae18089c 552 PRINTS PR01009 Flagellar M-ring protein signature 128 146 8.2E-40 T 01-11-2018 IPR000067 Flagellar M-ring protein FliF GO:0003774|GO:0009431|GO:0071973 CDA09_06830 be46c666cee6af8080246e03ae18089c 552 PRINTS PR01009 Flagellar M-ring protein signature 203 221 8.2E-40 T 01-11-2018 IPR000067 Flagellar M-ring protein FliF GO:0003774|GO:0009431|GO:0071973 CDA09_06830 be46c666cee6af8080246e03ae18089c 552 Gene3D G3DSA:3.30.300.30 128 230 1.9E-14 T 01-11-2018 CDA09_06830 be46c666cee6af8080246e03ae18089c 552 TIGRFAM TIGR00206 fliF: flagellar M-ring protein FliF 20 545 1.0E-119 T 01-11-2018 IPR000067 Flagellar M-ring protein FliF GO:0003774|GO:0009431|GO:0071973 CDA09_06830 be46c666cee6af8080246e03ae18089c 552 Pfam PF01514 Secretory protein of YscJ/FliF family 38 227 9.0E-73 T 01-11-2018 IPR006182 Secretory protein YscJ/FliF CDA09_10520 bc760283518824c68b828ce276b83739 337 SUPERFAMILY SSF51735 136 262 3.35E-5 T 01-11-2018 IPR036291 NAD(P)-binding domain superfamily CDA09_10520 bc760283518824c68b828ce276b83739 337 Pfam PF02625 XdhC and CoxI family 15 69 9.8E-23 T 01-11-2018 IPR003777 XdhC- CoxI CDA09_10520 bc760283518824c68b828ce276b83739 337 Pfam PF13478 XdhC Rossmann domain 170 311 1.7E-36 T 01-11-2018 IPR027051 XdhC Rossmann domain CDA09_10520 bc760283518824c68b828ce276b83739 337 Gene3D G3DSA:3.40.50.720 168 317 6.3E-42 T 01-11-2018 CDA09_08035 33607310f6d639c7740d46d1ea6dbc86 234 Gene3D G3DSA:1.10.3720.10 2 230 1.1E-22 T 01-11-2018 IPR035906 MetI-like superfamily CDA09_08035 33607310f6d639c7740d46d1ea6dbc86 234 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 44 232 3.0E-8 T 01-11-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 CDA09_08035 33607310f6d639c7740d46d1ea6dbc86 234 SUPERFAMILY SSF161098 17 221 7.46E-29 T 01-11-2018 IPR035906 MetI-like superfamily CDA09_03245 8bb16e948adb596cbb63cfc41255be39 384 Gene3D G3DSA:2.120.10.30 70 209 4.2E-19 T 01-11-2018 IPR011042 Six-bladed beta-propeller, TolB-like CDA09_03245 8bb16e948adb596cbb63cfc41255be39 384 Gene3D G3DSA:2.120.10.30 210 379 6.6E-29 T 01-11-2018 IPR011042 Six-bladed beta-propeller, TolB-like CDA09_03245 8bb16e948adb596cbb63cfc41255be39 384 SUPERFAMILY SSF101898 89 329 4.71E-32 T 01-11-2018 CDA09_22505 45d6979160d52158fb2332feddf40de1 475 Pfam PF02321 Outer membrane efflux protein 64 255 4.8E-23 T 01-11-2018 IPR003423 Outer membrane efflux protein GO:0015562|GO:0055085 CDA09_22505 45d6979160d52158fb2332feddf40de1 475 Pfam PF02321 Outer membrane efflux protein 287 463 2.6E-20 T 01-11-2018 IPR003423 Outer membrane efflux protein GO:0015562|GO:0055085 CDA09_22505 45d6979160d52158fb2332feddf40de1 475 TIGRFAM TIGR01845 outer_NodT: efflux transporter, outer membrane factor (OMF) lipoprotein, NodT family 15 465 3.4E-123 T 01-11-2018 IPR010131 RND efflux system, outer membrane lipoprotein, NodT GO:0016020|GO:0022857|GO:0055085 CDA09_22505 45d6979160d52158fb2332feddf40de1 475 Gene3D G3DSA:2.20.200.10 100 350 2.5E-117 T 01-11-2018 CDA09_22505 45d6979160d52158fb2332feddf40de1 475 Gene3D G3DSA:1.20.1600.10 55 465 2.5E-117 T 01-11-2018 CDA09_22505 45d6979160d52158fb2332feddf40de1 475 SUPERFAMILY SSF56954 4 467 8.24E-101 T 01-11-2018 CDA09_16370 b712550ee2f5fd52c8efddd34e18d3c7 391 Gene3D G3DSA:1.25.40.10 3 189 1.1E-26 T 01-11-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 CDA09_16370 b712550ee2f5fd52c8efddd34e18d3c7 391 Pfam PF13432 Tetratricopeptide repeat 99 152 4.3E-6 T 01-11-2018 CDA09_16370 b712550ee2f5fd52c8efddd34e18d3c7 391 Pfam PF13432 Tetratricopeptide repeat 31 88 2.5E-9 T 01-11-2018 CDA09_16370 b712550ee2f5fd52c8efddd34e18d3c7 391 SUPERFAMILY SSF48452 36 170 1.87E-23 T 01-11-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 CDA09_16370 b712550ee2f5fd52c8efddd34e18d3c7 391 SMART SM00028 94 127 0.0013 T 01-11-2018 IPR019734 Tetratricopeptide repeat GO:0005515 CDA09_16370 b712550ee2f5fd52c8efddd34e18d3c7 391 SMART SM00028 128 156 87.0 T 01-11-2018 IPR019734 Tetratricopeptide repeat GO:0005515 CDA09_16370 b712550ee2f5fd52c8efddd34e18d3c7 391 SMART SM00028 60 93 40.0 T 01-11-2018 IPR019734 Tetratricopeptide repeat GO:0005515 CDA09_16370 b712550ee2f5fd52c8efddd34e18d3c7 391 Pfam PF14534 Domain of unknown function (DUF4440) 286 384 1.3E-6 T 01-11-2018 IPR027843 Domain of unknown function DUF4440 CDA09_16370 b712550ee2f5fd52c8efddd34e18d3c7 391 SUPERFAMILY SSF54427 284 385 3.76E-18 T 01-11-2018 IPR032710 NTF2-like domain superfamily CDA09_16370 b712550ee2f5fd52c8efddd34e18d3c7 391 Gene3D G3DSA:3.10.450.50 280 390 2.0E-13 T 01-11-2018 CDA09_15660 1970b9fc6ad2e82a6205c31f7aecb45b 454 SMART SM00448 3 114 1.5E-34 T 01-11-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 CDA09_15660 1970b9fc6ad2e82a6205c31f7aecb45b 454 SUPERFAMILY SSF52172 4 190 1.24E-44 T 01-11-2018 IPR011006 CheY-like superfamily CDA09_15660 1970b9fc6ad2e82a6205c31f7aecb45b 454 Pfam PF00158 Sigma-54 interaction domain 145 311 7.6E-61 T 01-11-2018 IPR002078 RNA polymerase sigma factor 54 interaction domain GO:0005524|GO:0006355|GO:0008134 CDA09_15660 1970b9fc6ad2e82a6205c31f7aecb45b 454 Pfam PF02954 Bacterial regulatory protein, Fis family 410 447 3.6E-8 T 01-11-2018 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 CDA09_15660 1970b9fc6ad2e82a6205c31f7aecb45b 454 Gene3D G3DSA:1.10.10.60 396 449 8.1E-12 T 01-11-2018 CDA09_15660 1970b9fc6ad2e82a6205c31f7aecb45b 454 ProSitePatterns PS00688 Sigma-54 interaction domain C-terminal part signature. 356 365 - T 01-11-2018 IPR025944 Sigma-54 interaction domain, conserved site CDA09_15660 1970b9fc6ad2e82a6205c31f7aecb45b 454 SUPERFAMILY SSF52540 145 384 1.29E-63 T 01-11-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CDA09_15660 1970b9fc6ad2e82a6205c31f7aecb45b 454 ProSitePatterns PS00675 Sigma-54 interaction domain ATP-binding region A signature. 169 182 - T 01-11-2018 IPR025662 Sigma-54 interaction domain, ATP-binding site 1 CDA09_15660 1970b9fc6ad2e82a6205c31f7aecb45b 454 Pfam PF00072 Response regulator receiver domain 5 111 5.9E-30 T 01-11-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 CDA09_15660 1970b9fc6ad2e82a6205c31f7aecb45b 454 SUPERFAMILY SSF46689 356 448 2.06E-12 T 01-11-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 CDA09_15660 1970b9fc6ad2e82a6205c31f7aecb45b 454 SMART SM00382 165 308 3.6E-7 T 01-11-2018 IPR003593 AAA+ ATPase domain CDA09_15660 1970b9fc6ad2e82a6205c31f7aecb45b 454 Gene3D G3DSA:3.40.50.2300 1 121 8.1E-36 T 01-11-2018 CDA09_15660 1970b9fc6ad2e82a6205c31f7aecb45b 454 Gene3D G3DSA:1.10.8.60 316 391 4.1E-21 T 01-11-2018 CDA09_15660 1970b9fc6ad2e82a6205c31f7aecb45b 454 Gene3D G3DSA:3.40.50.300 122 315 4.1E-56 T 01-11-2018 CDA09_13840 6c4a9801ac4bb3b9abacb7b579c71c55 435 Gene3D G3DSA:3.20.20.140 4 371 3.8E-88 T 01-11-2018 CDA09_13840 6c4a9801ac4bb3b9abacb7b579c71c55 435 Pfam PF04909 Amidohydrolase 77 369 1.7E-27 T 01-11-2018 IPR006680 Amidohydrolase-related GO:0016787 CDA09_13840 6c4a9801ac4bb3b9abacb7b579c71c55 435 SUPERFAMILY SSF51556 9 377 1.92E-76 T 01-11-2018 IPR032466 Metal-dependent hydrolase CDA09_01575 cccc54540a803b20d1067e6d008bd59e 353 SMART SM01005 229 352 1.4E-62 T 01-11-2018 IPR011079 Alanine racemase, C-terminal KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 CDA09_01575 cccc54540a803b20d1067e6d008bd59e 353 SUPERFAMILY SSF51419 8 230 1.57E-72 T 01-11-2018 IPR029066 PLP-binding barrel CDA09_01575 cccc54540a803b20d1067e6d008bd59e 353 Hamap MF_01201 Alanine racemase. 1 352 35.502 T 01-11-2018 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 CDA09_01575 cccc54540a803b20d1067e6d008bd59e 353 ProSitePatterns PS00395 Alanine racemase pyridoxal-phosphate attachment site. 30 40 - T 01-11-2018 IPR020622 Alanine racemase, pyridoxal-phosphate attachment site KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 CDA09_01575 cccc54540a803b20d1067e6d008bd59e 353 TIGRFAM TIGR00492 alr: alanine racemase 3 346 4.5E-107 T 01-11-2018 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 CDA09_01575 cccc54540a803b20d1067e6d008bd59e 353 Gene3D G3DSA:2.40.37.10 8 347 2.9E-128 T 01-11-2018 IPR009006 Alanine racemase/group IV decarboxylase, C-terminal GO:0003824 CDA09_01575 cccc54540a803b20d1067e6d008bd59e 353 SUPERFAMILY SSF50621 222 346 1.33E-43 T 01-11-2018 IPR009006 Alanine racemase/group IV decarboxylase, C-terminal GO:0003824 CDA09_01575 cccc54540a803b20d1067e6d008bd59e 353 Pfam PF01168 Alanine racemase, N-terminal domain 8 218 2.4E-71 T 01-11-2018 IPR001608 Alanine racemase, N-terminal KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 CDA09_01575 cccc54540a803b20d1067e6d008bd59e 353 PRINTS PR00992 Alanine racemase signature 245 260 1.4E-65 T 01-11-2018 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 CDA09_01575 cccc54540a803b20d1067e6d008bd59e 353 PRINTS PR00992 Alanine racemase signature 120 132 1.4E-65 T 01-11-2018 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 CDA09_01575 cccc54540a803b20d1067e6d008bd59e 353 PRINTS PR00992 Alanine racemase signature 154 165 1.4E-65 T 01-11-2018 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 CDA09_01575 cccc54540a803b20d1067e6d008bd59e 353 PRINTS PR00992 Alanine racemase signature 191 218 1.4E-65 T 01-11-2018 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 CDA09_01575 cccc54540a803b20d1067e6d008bd59e 353 PRINTS PR00992 Alanine racemase signature 335 348 1.4E-65 T 01-11-2018 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 CDA09_01575 cccc54540a803b20d1067e6d008bd59e 353 PRINTS PR00992 Alanine racemase signature 60 78 1.4E-65 T 01-11-2018 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 CDA09_01575 cccc54540a803b20d1067e6d008bd59e 353 PRINTS PR00992 Alanine racemase signature 262 277 1.4E-65 T 01-11-2018 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 CDA09_01575 cccc54540a803b20d1067e6d008bd59e 353 PRINTS PR00992 Alanine racemase signature 25 41 1.4E-65 T 01-11-2018 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 CDA09_01575 cccc54540a803b20d1067e6d008bd59e 353 PRINTS PR00992 Alanine racemase signature 283 300 1.4E-65 T 01-11-2018 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 CDA09_01575 cccc54540a803b20d1067e6d008bd59e 353 Pfam PF00842 Alanine racemase, C-terminal domain 229 346 1.0E-38 T 01-11-2018 IPR011079 Alanine racemase, C-terminal KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 CDA09_01575 cccc54540a803b20d1067e6d008bd59e 353 Gene3D G3DSA:3.20.20.10 10 216 2.9E-128 T 01-11-2018 IPR029066 PLP-binding barrel CDA09_03260 fdbb563111283ee848a639042d4de09a 506 Pfam PF14522 Cytochrome c7 and related cytochrome c 287 350 7.4E-6 T 01-11-2018 IPR029467 C-type polyheme cytochrome OmcB CDA09_03260 fdbb563111283ee848a639042d4de09a 506 Gene3D G3DSA:3.90.10.10 355 424 7.8E-7 T 01-11-2018 CDA09_03260 fdbb563111283ee848a639042d4de09a 506 Gene3D G3DSA:3.90.10.10 287 352 6.7E-7 T 01-11-2018 CDA09_03260 fdbb563111283ee848a639042d4de09a 506 Pfam PF09699 Doubled CXXCH motif (Paired_CXXCH_1) 79 134 6.5E-5 T 01-11-2018 IPR010177 Doubled CXXCH motif CDA09_03260 fdbb563111283ee848a639042d4de09a 506 SUPERFAMILY SSF48695 209 404 4.04E-21 T 01-11-2018 IPR036280 Multiheme cytochrome superfamily CDA09_03260 fdbb563111283ee848a639042d4de09a 506 SUPERFAMILY SSF48695 5 217 9.35E-22 T 01-11-2018 IPR036280 Multiheme cytochrome superfamily CDA09_03260 fdbb563111283ee848a639042d4de09a 506 Gene3D G3DSA:3.90.10.10 217 286 1.7E-6 T 01-11-2018 CDA09_03260 fdbb563111283ee848a639042d4de09a 506 Gene3D G3DSA:3.90.10.10 135 216 4.1E-9 T 01-11-2018 CDA09_03260 fdbb563111283ee848a639042d4de09a 506 Gene3D G3DSA:3.90.10.10 24 111 1.2E-5 T 01-11-2018 CDA09_03260 fdbb563111283ee848a639042d4de09a 506 SUPERFAMILY SSF48695 378 447 1.67E-5 T 01-11-2018 IPR036280 Multiheme cytochrome superfamily CDA09_09780 490c9e21c1c24b7bd1d2cc9ec9d21bf6 474 Pfam PF07690 Major Facilitator Superfamily 13 403 1.4E-52 T 01-11-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 CDA09_09780 490c9e21c1c24b7bd1d2cc9ec9d21bf6 474 Gene3D G3DSA:1.20.1720.10 11 222 1.4E-40 T 01-11-2018 CDA09_09780 490c9e21c1c24b7bd1d2cc9ec9d21bf6 474 Gene3D G3DSA:1.20.1250.20 255 460 8.4E-16 T 01-11-2018 CDA09_09780 490c9e21c1c24b7bd1d2cc9ec9d21bf6 474 SUPERFAMILY SSF103473 3 455 7.98E-65 T 01-11-2018 IPR036259 MFS transporter superfamily CDA09_01000 ed262e097e86ba48034b2a9d728646ae 210 Gene3D G3DSA:1.10.530.10 76 205 1.5E-41 T 01-11-2018 CDA09_01000 ed262e097e86ba48034b2a9d728646ae 210 ProSitePatterns PS00922 Prokaryotic transglycosylases signature. 100 128 - T 01-11-2018 IPR000189 Prokaryotic transglycosylase, active site GO:0000270|GO:0008933|GO:0016020 CDA09_01000 ed262e097e86ba48034b2a9d728646ae 210 SUPERFAMILY SSF53955 77 201 1.19E-46 T 01-11-2018 IPR023346 Lysozyme-like domain superfamily CDA09_01000 ed262e097e86ba48034b2a9d728646ae 210 Pfam PF01464 Transglycosylase SLT domain 84 180 8.4E-29 T 01-11-2018 IPR008258 Transglycosylase SLT domain 1 CDA09_10530 cc40059732960de8bbee21e37043d9dc 157 SUPERFAMILY SSF54292 4 75 5.64E-25 T 01-11-2018 IPR036010 2Fe-2S ferredoxin-like superfamily GO:0009055|GO:0051536 CDA09_10530 cc40059732960de8bbee21e37043d9dc 157 Pfam PF01799 [2Fe-2S] binding domain 72 149 1.9E-22 T 01-11-2018 IPR002888 [2Fe-2S]-binding GO:0016491|GO:0046872|GO:0055114 CDA09_10530 cc40059732960de8bbee21e37043d9dc 157 Gene3D G3DSA:3.10.20.30 1 75 1.4E-27 T 01-11-2018 IPR012675 Beta-grasp domain superfamily CDA09_10530 cc40059732960de8bbee21e37043d9dc 157 ProSitePatterns PS00197 2Fe-2S ferredoxin-type iron-sulfur binding region signature. 38 46 - T 01-11-2018 IPR006058 2Fe-2S ferredoxin, iron-sulphur binding site GO:0051537 CDA09_10530 cc40059732960de8bbee21e37043d9dc 157 Pfam PF00111 2Fe-2S iron-sulfur cluster binding domain 5 61 7.6E-8 T 01-11-2018 IPR001041 2Fe-2S ferredoxin-type iron-sulfur binding domain GO:0009055|GO:0051536 CDA09_10530 cc40059732960de8bbee21e37043d9dc 157 Gene3D G3DSA:1.10.150.120 80 157 3.1E-23 T 01-11-2018 CDA09_10530 cc40059732960de8bbee21e37043d9dc 157 SUPERFAMILY SSF47741 84 155 1.31E-25 T 01-11-2018 IPR036884 [2Fe-2S]-binding domain superfamily CDA09_12880 a31fe8fcc528c4916679ed84ac71cc1c 260 SUPERFAMILY SSF48403 84 245 3.67E-31 T 01-11-2018 IPR036770 Ankyrin repeat-containing domain superfamily CDA09_12880 a31fe8fcc528c4916679ed84ac71cc1c 260 Gene3D G3DSA:1.25.40.20 171 260 5.8E-15 T 01-11-2018 IPR036770 Ankyrin repeat-containing domain superfamily CDA09_12880 a31fe8fcc528c4916679ed84ac71cc1c 260 Gene3D G3DSA:1.25.40.20 72 170 1.3E-16 T 01-11-2018 IPR036770 Ankyrin repeat-containing domain superfamily CDA09_12880 a31fe8fcc528c4916679ed84ac71cc1c 260 SMART SM00248 128 157 0.14 T 01-11-2018 IPR002110 Ankyrin repeat GO:0005515 CDA09_12880 a31fe8fcc528c4916679ed84ac71cc1c 260 SMART SM00248 95 124 41.0 T 01-11-2018 IPR002110 Ankyrin repeat GO:0005515 CDA09_12880 a31fe8fcc528c4916679ed84ac71cc1c 260 SMART SM00248 197 226 0.27 T 01-11-2018 IPR002110 Ankyrin repeat GO:0005515 CDA09_12880 a31fe8fcc528c4916679ed84ac71cc1c 260 SMART SM00248 161 193 3.1 T 01-11-2018 IPR002110 Ankyrin repeat GO:0005515 CDA09_12880 a31fe8fcc528c4916679ed84ac71cc1c 260 Pfam PF12796 Ankyrin repeats (3 copies) 103 195 6.1E-10 T 01-11-2018 IPR020683 Ankyrin repeat-containing domain CDA09_18095 f69a7a2eb8db0336ad670a85e09581fd 619 Pfam PF02355 Protein export membrane protein 428 599 2.7E-21 T 01-11-2018 IPR022813 Protein-export membrane protein SecD/SecF, archaeal and bacterial CDA09_18095 f69a7a2eb8db0336ad670a85e09581fd 619 Gene3D G3DSA:3.30.1360.200 286 427 5.0E-57 T 01-11-2018 CDA09_18095 f69a7a2eb8db0336ad670a85e09581fd 619 Hamap MF_01463_B Protein translocase subunit SecD [secD]. 2 611 48.331 T 01-11-2018 IPR005791 Protein translocase subunit SecD GO:0006886|GO:0015450 CDA09_18095 f69a7a2eb8db0336ad670a85e09581fd 619 SUPERFAMILY SSF82866 406 604 4.58E-39 T 01-11-2018 CDA09_18095 f69a7a2eb8db0336ad670a85e09581fd 619 Gene3D G3DSA:1.20.1640.10 429 609 2.7E-10 T 01-11-2018 CDA09_18095 f69a7a2eb8db0336ad670a85e09581fd 619 Gene3D G3DSA:3.30.70.3400 226 428 5.0E-57 T 01-11-2018 CDA09_18095 f69a7a2eb8db0336ad670a85e09581fd 619 TIGRFAM TIGR00916 2A0604s01: protein-export membrane protein, SecD/SecF family 355 589 1.4E-74 T 01-11-2018 IPR022645 Protein-export membrane protein SecD/SecF, bacterial CDA09_18095 f69a7a2eb8db0336ad670a85e09581fd 619 TIGRFAM TIGR01129 secD: protein-export membrane protein SecD 128 596 2.2E-146 T 01-11-2018 IPR005791 Protein translocase subunit SecD GO:0006886|GO:0015450 CDA09_18095 f69a7a2eb8db0336ad670a85e09581fd 619 Pfam PF07549 SecD/SecF GG Motif 124 145 4.3E-6 T 01-11-2018 IPR022646 Protein-export membrane protein SecD/SecF/SecDF, conserved site CDA09_18095 f69a7a2eb8db0336ad670a85e09581fd 619 Pfam PF13721 SecD export protein N-terminal TM region 1 108 5.7E-34 T 01-11-2018 IPR027398 SecD export protein N-terminal TM domain CDA09_17925 4b8a90fcac8d7507771a78f780c913ab 711 Pfam PF01627 Hpt domain 384 474 2.5E-6 T 01-11-2018 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160 CDA09_17925 4b8a90fcac8d7507771a78f780c913ab 711 SMART SM00387 552 696 5.7E-11 T 01-11-2018 IPR003594 Histidine kinase/HSP90-like ATPase CDA09_17925 4b8a90fcac8d7507771a78f780c913ab 711 PRINTS PR00344 Bacterial sensor protein C-terminal signature 656 674 6.2E-9 T 01-11-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 CDA09_17925 4b8a90fcac8d7507771a78f780c913ab 711 PRINTS PR00344 Bacterial sensor protein C-terminal signature 640 650 6.2E-9 T 01-11-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 CDA09_17925 4b8a90fcac8d7507771a78f780c913ab 711 PRINTS PR00344 Bacterial sensor protein C-terminal signature 598 612 6.2E-9 T 01-11-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 CDA09_17925 4b8a90fcac8d7507771a78f780c913ab 711 PRINTS PR00344 Bacterial sensor protein C-terminal signature 680 693 6.2E-9 T 01-11-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 CDA09_17925 4b8a90fcac8d7507771a78f780c913ab 711 Gene3D G3DSA:3.30.565.10 514 694 1.7E-34 T 01-11-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily CDA09_17925 4b8a90fcac8d7507771a78f780c913ab 711 SUPERFAMILY SSF55874 516 693 8.73E-28 T 01-11-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily CDA09_17925 4b8a90fcac8d7507771a78f780c913ab 711 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 558 694 4.1E-10 T 01-11-2018 IPR003594 Histidine kinase/HSP90-like ATPase CDA09_17925 4b8a90fcac8d7507771a78f780c913ab 711 Gene3D G3DSA:1.20.120.160 374 513 2.1E-10 T 01-11-2018 IPR036641 HPT domain superfamily GO:0000160 CDA09_17925 4b8a90fcac8d7507771a78f780c913ab 711 SUPERFAMILY SSF47226 382 484 1.57E-10 T 01-11-2018 IPR036641 HPT domain superfamily GO:0000160 CDA09_17925 4b8a90fcac8d7507771a78f780c913ab 711 Gene3D G3DSA:3.30.450.20 213 366 3.9E-10 T 01-11-2018 CDA09_17925 4b8a90fcac8d7507771a78f780c913ab 711 Pfam PF13675 Type IV pili methyl-accepting chemotaxis transducer N-term 33 146 1.6E-14 T 01-11-2018 IPR029095 NarX-like, N-terminal CDA09_12635 a51f1874bfac7495d99a9711de93c565 300 SUPERFAMILY SSF48150 115 293 1.01E-36 T 01-11-2018 IPR011257 DNA glycosylase GO:0003824|GO:0006281 Reactome: R-HSA-110357 CDA09_12635 a51f1874bfac7495d99a9711de93c565 300 SMART SM00478 134 296 5.8E-8 T 01-11-2018 IPR003265 HhH-GPD domain GO:0006284 Reactome: R-HSA-110357 CDA09_12635 a51f1874bfac7495d99a9711de93c565 300 Gene3D G3DSA:1.10.340.30 122 243 6.4E-45 T 01-11-2018 CDA09_12635 a51f1874bfac7495d99a9711de93c565 300 Gene3D G3DSA:1.10.1670.40 99 293 6.4E-45 T 01-11-2018 CDA09_12635 a51f1874bfac7495d99a9711de93c565 300 Pfam PF00730 HhH-GPD superfamily base excision DNA repair protein 132 274 2.0E-9 T 01-11-2018 IPR003265 HhH-GPD domain GO:0006284 Reactome: R-HSA-110357 CDA09_12635 a51f1874bfac7495d99a9711de93c565 300 SMART SM01009 8 124 1.0E-12 T 01-11-2018 IPR010316 DNA-3-methyladenine glycosylase AlkA, N-terminal CDA09_12635 a51f1874bfac7495d99a9711de93c565 300 Pfam PF06029 AlkA N-terminal domain 17 121 3.6E-7 T 01-11-2018 IPR010316 DNA-3-methyladenine glycosylase AlkA, N-terminal CDA09_21940 6ce286b793d70830f4fb7f984e16d8f5 518 Gene3D G3DSA:3.20.20.140 62 475 1.3E-82 T 01-11-2018 CDA09_21940 6ce286b793d70830f4fb7f984e16d8f5 518 Gene3D G3DSA:2.30.40.10 17 488 1.3E-82 T 01-11-2018 IPR011059 Metal-dependent hydrolase, composite domain superfamily GO:0016810 CDA09_21940 6ce286b793d70830f4fb7f984e16d8f5 518 SUPERFAMILY SSF51338 3 516 1.2E-16 T 01-11-2018 IPR011059 Metal-dependent hydrolase, composite domain superfamily GO:0016810 CDA09_21940 6ce286b793d70830f4fb7f984e16d8f5 518 SUPERFAMILY SSF51556 61 476 1.4E-26 T 01-11-2018 IPR032466 Metal-dependent hydrolase CDA09_21940 6ce286b793d70830f4fb7f984e16d8f5 518 Gene3D G3DSA:3.10.310.70 80 201 1.3E-82 T 01-11-2018 CDA09_21940 6ce286b793d70830f4fb7f984e16d8f5 518 Pfam PF07969 Amidohydrolase family 50 515 6.7E-64 T 01-11-2018 IPR013108 Amidohydrolase 3 CDA09_09655 10e21c330cae248bb36b2a2fa8cd07d8 352 Pfam PF00441 Acyl-CoA dehydrogenase, C-terminal domain 192 326 1.8E-26 T 01-11-2018 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal GO:0016627|GO:0055114 CDA09_09655 10e21c330cae248bb36b2a2fa8cd07d8 352 SUPERFAMILY SSF56645 1 125 1.83E-16 T 01-11-2018 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain superfamily GO:0016627|GO:0055114 CDA09_09655 10e21c330cae248bb36b2a2fa8cd07d8 352 SUPERFAMILY SSF47203 190 339 1.24E-37 T 01-11-2018 IPR036250 Acyl-CoA dehydrogenase-like, C-terminal GO:0016627|GO:0055114 CDA09_09655 10e21c330cae248bb36b2a2fa8cd07d8 352 Gene3D G3DSA:1.20.140.10 192 340 7.4E-35 T 01-11-2018 CDA09_09655 10e21c330cae248bb36b2a2fa8cd07d8 352 Pfam PF02771 Acyl-CoA dehydrogenase, N-terminal domain 6 84 2.0E-11 T 01-11-2018 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal GO:0016627|GO:0050660|GO:0055114 CDA09_09655 10e21c330cae248bb36b2a2fa8cd07d8 352 Gene3D G3DSA:1.10.540.10 1 120 1.8E-21 T 01-11-2018 IPR037069 Acyl-CoA dehydrogenase/oxidase, N-terminal domain superfamily GO:0016627|GO:0050660|GO:0055114 CDA09_20015 d5f2b8b2933f286e197b5599a0ca91e1 385 Pfam PF13614 AAA domain 128 274 2.2E-13 T 01-11-2018 IPR025669 AAA domain CDA09_20015 d5f2b8b2933f286e197b5599a0ca91e1 385 Gene3D G3DSA:3.40.50.2300 1 123 9.4E-21 T 01-11-2018 CDA09_20015 d5f2b8b2933f286e197b5599a0ca91e1 385 SUPERFAMILY SSF52172 1 119 7.78E-9 T 01-11-2018 IPR011006 CheY-like superfamily CDA09_20015 d5f2b8b2933f286e197b5599a0ca91e1 385 Gene3D G3DSA:3.40.50.300 126 367 1.4E-56 T 01-11-2018 CDA09_20015 d5f2b8b2933f286e197b5599a0ca91e1 385 SUPERFAMILY SSF52540 128 367 2.66E-37 T 01-11-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CDA09_05000 cbc3d82f9a2c994aae1ea214286cad34 533 SUPERFAMILY SSF53927 221 533 1.81E-128 T 01-11-2018 IPR016193 Cytidine deaminase-like GO:0003824 CDA09_05000 cbc3d82f9a2c994aae1ea214286cad34 533 SUPERFAMILY SSF52335 4 198 8.24E-70 T 01-11-2018 IPR036914 Methylglyoxal synthase-like domain superfamily CDA09_05000 cbc3d82f9a2c994aae1ea214286cad34 533 Hamap MF_00139 Bifunctional purine biosynthesis protein PurH [purH]. 3 533 44.879 T 01-11-2018 IPR002695 Bifunctional purine biosynthesis protein PurH-like GO:0003937|GO:0004643|GO:0006164 KEGG: 00230+3.5.4.10+2.1.2.3|KEGG: 00670+2.1.2.3|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7234|Reactome: R-HSA-73817 CDA09_05000 cbc3d82f9a2c994aae1ea214286cad34 533 SMART SM00851 15 130 1.1E-63 T 01-11-2018 IPR011607 Methylglyoxal synthase-like domain CDA09_05000 cbc3d82f9a2c994aae1ea214286cad34 533 Pfam PF02142 MGS-like domain 15 130 3.4E-31 T 01-11-2018 IPR011607 Methylglyoxal synthase-like domain CDA09_05000 cbc3d82f9a2c994aae1ea214286cad34 533 TIGRFAM TIGR00355 purH: phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase 5 533 4.3E-224 T 01-11-2018 IPR002695 Bifunctional purine biosynthesis protein PurH-like GO:0003937|GO:0004643|GO:0006164 KEGG: 00230+3.5.4.10+2.1.2.3|KEGG: 00670+2.1.2.3|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7234|Reactome: R-HSA-73817 CDA09_05000 cbc3d82f9a2c994aae1ea214286cad34 533 PIRSF PIRSF000414 1 533 5.4E-217 T 01-11-2018 IPR002695 Bifunctional purine biosynthesis protein PurH-like GO:0003937|GO:0004643|GO:0006164 KEGG: 00230+3.5.4.10+2.1.2.3|KEGG: 00670+2.1.2.3|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7234|Reactome: R-HSA-73817 CDA09_05000 cbc3d82f9a2c994aae1ea214286cad34 533 Gene3D G3DSA:3.40.140.20 218 372 7.8E-60 T 01-11-2018 IPR024051 AICAR transformylase, duplicated domain superfamily KEGG: 00230+3.5.4.10+2.1.2.3|KEGG: 00670+2.1.2.3|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7234|Reactome: R-HSA-73817 CDA09_05000 cbc3d82f9a2c994aae1ea214286cad34 533 Pfam PF01808 AICARFT/IMPCHase bienzyme 135 464 8.5E-119 T 01-11-2018 IPR002695 Bifunctional purine biosynthesis protein PurH-like GO:0003937|GO:0004643|GO:0006164 KEGG: 00230+3.5.4.10+2.1.2.3|KEGG: 00670+2.1.2.3|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7234|Reactome: R-HSA-73817 CDA09_05000 cbc3d82f9a2c994aae1ea214286cad34 533 SMART SM00798 135 465 3.8E-209 T 01-11-2018 IPR002695 Bifunctional purine biosynthesis protein PurH-like GO:0003937|GO:0004643|GO:0006164 KEGG: 00230+3.5.4.10+2.1.2.3|KEGG: 00670+2.1.2.3|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7234|Reactome: R-HSA-73817 CDA09_05000 cbc3d82f9a2c994aae1ea214286cad34 533 Gene3D G3DSA:3.40.50.1380 1 202 2.2E-84 T 01-11-2018 IPR036914 Methylglyoxal synthase-like domain superfamily CDA09_05000 cbc3d82f9a2c994aae1ea214286cad34 533 Gene3D G3DSA:3.40.140.20 396 533 2.2E-59 T 01-11-2018 IPR024051 AICAR transformylase, duplicated domain superfamily KEGG: 00230+3.5.4.10+2.1.2.3|KEGG: 00670+2.1.2.3|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7234|Reactome: R-HSA-73817 CDA09_10475 2b3c94470e7911432fe144c9c92ca38d 210 Pfam PF00072 Response regulator receiver domain 5 116 1.2E-29 T 01-11-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 CDA09_10475 2b3c94470e7911432fe144c9c92ca38d 210 SMART SM00421 146 203 2.7E-14 T 01-11-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 CDA09_10475 2b3c94470e7911432fe144c9c92ca38d 210 SUPERFAMILY SSF52172 1 129 4.84E-36 T 01-11-2018 IPR011006 CheY-like superfamily CDA09_10475 2b3c94470e7911432fe144c9c92ca38d 210 SMART SM00448 2 115 4.0E-32 T 01-11-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 CDA09_10475 2b3c94470e7911432fe144c9c92ca38d 210 Pfam PF00196 Bacterial regulatory proteins, luxR family 148 203 1.7E-13 T 01-11-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 CDA09_10475 2b3c94470e7911432fe144c9c92ca38d 210 SUPERFAMILY SSF46894 136 209 4.76E-19 T 01-11-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 CDA09_10475 2b3c94470e7911432fe144c9c92ca38d 210 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 149 163 2.5E-8 T 01-11-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 CDA09_10475 2b3c94470e7911432fe144c9c92ca38d 210 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 179 191 2.5E-8 T 01-11-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 CDA09_10475 2b3c94470e7911432fe144c9c92ca38d 210 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 163 179 2.5E-8 T 01-11-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 CDA09_10475 2b3c94470e7911432fe144c9c92ca38d 210 Gene3D G3DSA:3.40.50.12740 2 209 1.7E-61 T 01-11-2018 CDA09_19085 7d101b783ea9b7825d9249d1a4b65566 91 Pfam PF05016 ParE toxin of type II toxin-antitoxin system, parDE 3 90 6.8E-17 T 01-11-2018 IPR007712 Toxin-antitoxin system, RelE/ParE toxin family CDA09_19085 7d101b783ea9b7825d9249d1a4b65566 91 Gene3D G3DSA:3.30.2310.20 1 91 1.5E-15 T 01-11-2018 IPR035093 Toxin-antitoxin system, RelE/ParE toxin domain superfamily CDA09_22765 398e838dcf0ac0f2de7bde7760c0acb2 132 Pfam PF04134 Protein of unknown function, DUF393 19 130 1.8E-17 T 01-11-2018 IPR007263 Protein of unknown function DUF393 CDA09_00485 c39fb315dbfe99895b190116d860f489 512 TIGRFAM TIGR00962 atpA: ATP synthase F1, alpha subunit 3 511 1.2E-247 T 01-11-2018 IPR005294 ATP synthase, F1 complex, alpha subunit GO:0015986|GO:0045261|GO:0046933 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980|Reactome: R-HSA-1268020|Reactome: R-HSA-163210|Reactome: R-HSA-8949613 CDA09_00485 c39fb315dbfe99895b190116d860f489 512 Pfam PF00306 ATP synthase alpha/beta chain, C terminal domain 382 507 4.7E-44 T 01-11-2018 IPR000793 ATP synthase, alpha subunit, C-terminal GO:0015986 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980|Reactome: R-HSA-1268020|Reactome: R-HSA-163210|Reactome: R-HSA-8949613 CDA09_00485 c39fb315dbfe99895b190116d860f489 512 Gene3D G3DSA:1.20.150.20 383 511 1.6E-46 T 01-11-2018 IPR038376 ATP synthase, alpha subunit, C-terminal domain superfamily KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980|Reactome: R-HSA-1268020|Reactome: R-HSA-163210|Reactome: R-HSA-8949613 CDA09_00485 c39fb315dbfe99895b190116d860f489 512 SUPERFAMILY SSF47917 383 511 4.45E-45 T 01-11-2018 CDA09_00485 c39fb315dbfe99895b190116d860f489 512 Gene3D G3DSA:2.40.30.20 1 93 3.5E-33 T 01-11-2018 IPR023366 ATP synthase subunit alpha, N-terminal domain-like superfamily KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980 CDA09_00485 c39fb315dbfe99895b190116d860f489 512 ProSitePatterns PS00152 ATP synthase alpha and beta subunits signature. 366 375 - T 01-11-2018 IPR020003 ATPase, alpha/beta subunit, nucleotide-binding domain, active site GO:0005524 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980 CDA09_00485 c39fb315dbfe99895b190116d860f489 512 Pfam PF00006 ATP synthase alpha/beta family, nucleotide-binding domain 149 375 1.7E-75 T 01-11-2018 IPR000194 ATPase, F1/V1/A1 complex, alpha/beta subunit, nucleotide-binding domain GO:0005524 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980 CDA09_00485 c39fb315dbfe99895b190116d860f489 512 Hamap MF_01346 ATP synthase subunit alpha [atpA]. 1 512 50.487 T 01-11-2018 IPR005294 ATP synthase, F1 complex, alpha subunit GO:0015986|GO:0045261|GO:0046933 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980|Reactome: R-HSA-1268020|Reactome: R-HSA-163210|Reactome: R-HSA-8949613 CDA09_00485 c39fb315dbfe99895b190116d860f489 512 SUPERFAMILY SSF52540 96 381 5.94E-95 T 01-11-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CDA09_00485 c39fb315dbfe99895b190116d860f489 512 Gene3D G3DSA:3.40.50.300 94 382 1.3E-129 T 01-11-2018 CDA09_00485 c39fb315dbfe99895b190116d860f489 512 SUPERFAMILY SSF50615 10 94 1.96E-28 T 01-11-2018 IPR036121 ATPase, F1/V1/A1 complex, alpha/beta subunit, N-terminal domain superfamily GO:0046034|GO:1902600 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980 CDA09_00485 c39fb315dbfe99895b190116d860f489 512 PIRSF PIRSF039088 1 512 1.9E-236 T 01-11-2018 IPR005294 ATP synthase, F1 complex, alpha subunit GO:0015986|GO:0045261|GO:0046933 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980|Reactome: R-HSA-1268020|Reactome: R-HSA-163210|Reactome: R-HSA-8949613 CDA09_00485 c39fb315dbfe99895b190116d860f489 512 Pfam PF02874 ATP synthase alpha/beta family, beta-barrel domain 26 92 9.8E-16 T 01-11-2018 IPR004100 ATPase, F1/V1/A1 complex, alpha/beta subunit, N-terminal domain GO:0046034|GO:1902600 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980 CDA09_02180 54e13dc392a8b59c075369dcd68706d1 2460 SUPERFAMILY SSF51120 2253 2381 7.85E-27 T 01-11-2018 IPR011049 Serralysin-like metalloprotease, C-terminal CDA09_02180 54e13dc392a8b59c075369dcd68706d1 2460 Gene3D G3DSA:2.150.10.10 2267 2427 2.5E-26 T 01-11-2018 IPR011049 Serralysin-like metalloprotease, C-terminal CDA09_02180 54e13dc392a8b59c075369dcd68706d1 2460 ProSitePatterns PS00330 Hemolysin-type calcium-binding region signature. 2299 2317 - T 01-11-2018 IPR018511 Hemolysin-type calcium-binding conserved site CDA09_02180 54e13dc392a8b59c075369dcd68706d1 2460 ProSitePatterns PS00330 Hemolysin-type calcium-binding region signature. 2308 2326 - T 01-11-2018 IPR018511 Hemolysin-type calcium-binding conserved site CDA09_02180 54e13dc392a8b59c075369dcd68706d1 2460 Pfam PF00353 Haemolysin-type calcium-binding repeat (2 copies) 2320 2337 0.011 T 01-11-2018 IPR001343 Haemolysin-type calcium-binding repeat GO:0005509 CDA09_02180 54e13dc392a8b59c075369dcd68706d1 2460 Pfam PF00353 Haemolysin-type calcium-binding repeat (2 copies) 2284 2301 0.049 T 01-11-2018 IPR001343 Haemolysin-type calcium-binding repeat GO:0005509 CDA09_02180 54e13dc392a8b59c075369dcd68706d1 2460 Pfam PF00353 Haemolysin-type calcium-binding repeat (2 copies) 2303 2319 0.037 T 01-11-2018 IPR001343 Haemolysin-type calcium-binding repeat GO:0005509 CDA09_02180 54e13dc392a8b59c075369dcd68706d1 2460 TIGRFAM TIGR03661 T1SS_VCA0849: type I secretion C-terminal target domain (VC_A0849 subclass) 2353 2456 1.2E-14 T 01-11-2018 IPR019960 Type I secretion C-terminal target domain, VC_A0849 subclass CDA09_02180 54e13dc392a8b59c075369dcd68706d1 2460 PRINTS PR00313 NodO calcium binding signature 2330 2339 6.4E-8 T 01-11-2018 CDA09_02180 54e13dc392a8b59c075369dcd68706d1 2460 PRINTS PR00313 NodO calcium binding signature 2291 2302 6.4E-8 T 01-11-2018 CDA09_02180 54e13dc392a8b59c075369dcd68706d1 2460 PRINTS PR00313 NodO calcium binding signature 2321 2329 6.4E-8 T 01-11-2018 CDA09_02180 54e13dc392a8b59c075369dcd68706d1 2460 PRINTS PR00313 NodO calcium binding signature 2312 2320 6.4E-8 T 01-11-2018 CDA09_08975 a2fb38bdd9ba836a72b08265cb72f8e1 562 Gene3D G3DSA:1.10.443.10 361 534 2.8E-15 T 01-11-2018 IPR013762 Integrase-like, catalytic domain superfamily GO:0003677|GO:0006310|GO:0015074 CDA09_08975 a2fb38bdd9ba836a72b08265cb72f8e1 562 SUPERFAMILY SSF56349 264 527 5.18E-23 T 01-11-2018 IPR011010 DNA breaking-rejoining enzyme, catalytic core GO:0003677 CDA09_08975 a2fb38bdd9ba836a72b08265cb72f8e1 562 Pfam PF00589 Phage integrase family 367 526 1.4E-8 T 01-11-2018 IPR002104 Integrase, catalytic domain GO:0003677|GO:0006310|GO:0015074 CDA09_08370 8cf2930c5c630ab448792fdc1c0c13eb 305 Pfam PF03747 ADP-ribosylglycohydrolase 13 268 2.8E-59 T 01-11-2018 IPR005502 ADP-ribosylation/Crystallin J1 CDA09_08370 8cf2930c5c630ab448792fdc1c0c13eb 305 Gene3D G3DSA:1.10.4080.10 3 297 1.2E-100 T 01-11-2018 IPR036705 ADP-ribosylation/Crystallin J1 superfamily CDA09_08370 8cf2930c5c630ab448792fdc1c0c13eb 305 TIGRFAM TIGR02662 dinitro_DRAG: ADP-ribosyl-[dinitrogen reductase] hydrolase 9 291 6.4E-120 T 01-11-2018 IPR013479 ADP-ribosyl-dinitrogen reductase hydrolase CDA09_08370 8cf2930c5c630ab448792fdc1c0c13eb 305 SUPERFAMILY SSF101478 5 290 2.35E-75 T 01-11-2018 IPR036705 ADP-ribosylation/Crystallin J1 superfamily CDA09_11940 d9cd5abd0a9f569fdcc0538fa3f25c97 541 Gene3D G3DSA:1.20.210.10 83 533 6.4E-149 T 01-11-2018 IPR036927 Cytochrome c oxidase-like, subunit I superfamily GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 CDA09_11940 d9cd5abd0a9f569fdcc0538fa3f25c97 541 Pfam PF00115 Cytochrome C and Quinol oxidase polypeptide I 94 504 5.7E-77 T 01-11-2018 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 CDA09_11940 d9cd5abd0a9f569fdcc0538fa3f25c97 541 SUPERFAMILY SSF81442 88 528 1.16E-90 T 01-11-2018 IPR036927 Cytochrome c oxidase-like, subunit I superfamily GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 CDA09_13810 35000741499ecb8e7b89b465ae05e635 144 TIGRFAM TIGR02481 hemeryth_dom: hemerythrin-like metal-binding domain 8 126 2.0E-21 T 01-11-2018 IPR012827 Haemerythrin, metal-binding domain GO:0046872 CDA09_13810 35000741499ecb8e7b89b465ae05e635 144 Gene3D G3DSA:1.20.120.50 2 131 2.5E-18 T 01-11-2018 IPR035938 Hemerythrin-like superfamily CDA09_13810 35000741499ecb8e7b89b465ae05e635 144 SUPERFAMILY SSF47188 6 126 1.29E-24 T 01-11-2018 IPR035938 Hemerythrin-like superfamily CDA09_13810 35000741499ecb8e7b89b465ae05e635 144 Pfam PF01814 Hemerythrin HHE cation binding domain 19 123 3.2E-6 T 01-11-2018 IPR012312 Haemerythrin-like Reactome: R-HSA-390471|Reactome: R-HSA-8951664|Reactome: R-HSA-917937|Reactome: R-HSA-983168 CDA09_04640 3feac2dbba37cd7d20759792784f9094 199 Pfam PF00043 Glutathione S-transferase, C-terminal domain 106 183 6.6E-9 T 01-11-2018 IPR004046 Glutathione S-transferase, C-terminal CDA09_04640 3feac2dbba37cd7d20759792784f9094 199 Pfam PF02798 Glutathione S-transferase, N-terminal domain 2 72 1.2E-17 T 01-11-2018 IPR004045 Glutathione S-transferase, N-terminal GO:0005515 CDA09_04640 3feac2dbba37cd7d20759792784f9094 199 SUPERFAMILY SSF52833 1 101 5.91E-26 T 01-11-2018 IPR036249 Thioredoxin-like superfamily CDA09_04640 3feac2dbba37cd7d20759792784f9094 199 SUPERFAMILY SSF47616 73 198 8.77E-26 T 01-11-2018 IPR036282 Glutathione S-transferase, C-terminal domain superfamily CDA09_04640 3feac2dbba37cd7d20759792784f9094 199 Gene3D G3DSA:3.40.30.10 2 191 1.3E-74 T 01-11-2018 CDA09_04640 3feac2dbba37cd7d20759792784f9094 199 Gene3D G3DSA:1.20.1050.10 80 183 1.3E-74 T 01-11-2018 CDA09_10650 438b733140f4e54a1dee6c216bfdb553 204 Gene3D G3DSA:1.10.357.10 77 204 9.2E-29 T 01-11-2018 CDA09_10650 438b733140f4e54a1dee6c216bfdb553 204 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 23 36 7.4E-5 T 01-11-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 CDA09_10650 438b733140f4e54a1dee6c216bfdb553 204 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 44 67 7.4E-5 T 01-11-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 CDA09_10650 438b733140f4e54a1dee6c216bfdb553 204 Gene3D G3DSA:1.10.10.60 9 76 4.0E-25 T 01-11-2018 CDA09_10650 438b733140f4e54a1dee6c216bfdb553 204 SUPERFAMILY SSF46689 11 84 1.49E-16 T 01-11-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 CDA09_10650 438b733140f4e54a1dee6c216bfdb553 204 Pfam PF00440 Bacterial regulatory proteins, tetR family 24 69 1.2E-14 T 01-11-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 CDA09_10650 438b733140f4e54a1dee6c216bfdb553 204 Pfam PF16925 Bacterial transcriptional repressor C-terminal 91 178 1.2E-6 T 01-11-2018 IPR011075 Tetracycline transcriptional regulator, TetR-related, C-terminal CDA09_10650 438b733140f4e54a1dee6c216bfdb553 204 SUPERFAMILY SSF48498 90 203 3.86E-26 T 01-11-2018 IPR036271 Tetracyclin repressor-like, C-terminal domain superfamily CDA09_21545 21e66f257d2bbf21d9329de35fea9a3a 369 Pfam PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion 41 314 4.4E-19 T 01-11-2018 IPR032317 RND efflux pump, membrane fusion protein, barrel-sandwich domain CDA09_21545 21e66f257d2bbf21d9329de35fea9a3a 369 Pfam PF00529 HlyD membrane-fusion protein of T1SS 25 357 6.8E-8 T 01-11-2018 IPR006143 RND efflux pump, membrane fusion protein GO:0005215|GO:0016020|GO:0055085 CDA09_21545 21e66f257d2bbf21d9329de35fea9a3a 369 Gene3D G3DSA:2.40.30.170 272 356 6.7E-28 T 01-11-2018 CDA09_21545 21e66f257d2bbf21d9329de35fea9a3a 369 Gene3D G3DSA:1.10.287.470 119 200 2.3E-6 T 01-11-2018 CDA09_21545 21e66f257d2bbf21d9329de35fea9a3a 369 Gene3D G3DSA:1.10.287.470 82 116 9.6E-10 T 01-11-2018 CDA09_21545 21e66f257d2bbf21d9329de35fea9a3a 369 Gene3D G3DSA:1.10.287.470 207 236 6.7E-28 T 01-11-2018 CDA09_21545 21e66f257d2bbf21d9329de35fea9a3a 369 PRINTS PR01490 Gram-negative bacterial RTX secretion protein D signature 248 269 1.3E-15 T 01-11-2018 IPR003997 RTX secretion protein D, Gram-negative bacteria GO:0009306|GO:0016020 CDA09_21545 21e66f257d2bbf21d9329de35fea9a3a 369 PRINTS PR01490 Gram-negative bacterial RTX secretion protein D signature 346 361 1.3E-15 T 01-11-2018 IPR003997 RTX secretion protein D, Gram-negative bacteria GO:0009306|GO:0016020 CDA09_21545 21e66f257d2bbf21d9329de35fea9a3a 369 PRINTS PR01490 Gram-negative bacterial RTX secretion protein D signature 280 304 1.3E-15 T 01-11-2018 IPR003997 RTX secretion protein D, Gram-negative bacteria GO:0009306|GO:0016020 CDA09_21545 21e66f257d2bbf21d9329de35fea9a3a 369 PRINTS PR01490 Gram-negative bacterial RTX secretion protein D signature 60 80 1.3E-15 T 01-11-2018 IPR003997 RTX secretion protein D, Gram-negative bacteria GO:0009306|GO:0016020 CDA09_21545 21e66f257d2bbf21d9329de35fea9a3a 369 SUPERFAMILY SSF111369 184 356 1.7E-11 T 01-11-2018 CDA09_21545 21e66f257d2bbf21d9329de35fea9a3a 369 Gene3D G3DSA:2.40.50.100 48 81 9.6E-10 T 01-11-2018 CDA09_21545 21e66f257d2bbf21d9329de35fea9a3a 369 Gene3D G3DSA:2.40.50.100 237 271 6.7E-28 T 01-11-2018 CDA09_03130 8c13439aec78390f82447564a26db94f 459 Pfam PF00083 Sugar (and other) transporter 18 419 2.5E-26 T 01-11-2018 IPR005828 Major facilitator, sugar transporter-like GO:0016021|GO:0022857|GO:0055085 CDA09_03130 8c13439aec78390f82447564a26db94f 459 ProSitePatterns PS00217 Sugar transport proteins signature 2. 126 151 - T 01-11-2018 IPR005829 Sugar transporter, conserved site GO:0005215|GO:0016021|GO:0055085 CDA09_03130 8c13439aec78390f82447564a26db94f 459 SUPERFAMILY SSF103473 14 427 5.49E-67 T 01-11-2018 IPR036259 MFS transporter superfamily CDA09_03130 8c13439aec78390f82447564a26db94f 459 Gene3D G3DSA:1.20.1250.20 13 438 1.1E-63 T 01-11-2018 CDA09_17000 189c4ba69f9933b909af1603772a8e40 390 Pfam PF07690 Major Facilitator Superfamily 11 348 2.6E-31 T 01-11-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 CDA09_17000 189c4ba69f9933b909af1603772a8e40 390 Gene3D G3DSA:1.20.1720.10 7 385 5.1E-72 T 01-11-2018 CDA09_17000 189c4ba69f9933b909af1603772a8e40 390 SUPERFAMILY SSF103473 8 382 2.49E-41 T 01-11-2018 IPR036259 MFS transporter superfamily CDA09_15695 13b31921fae2b14b5d1e5b5c7af06a62 399 Gene3D G3DSA:1.10.287.470 102 175 5.1E-111 T 01-11-2018 CDA09_15695 13b31921fae2b14b5d1e5b5c7af06a62 399 Gene3D G3DSA:2.40.30.170 53 307 5.1E-111 T 01-11-2018 CDA09_15695 13b31921fae2b14b5d1e5b5c7af06a62 399 Pfam PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion 68 297 1.0E-12 T 01-11-2018 IPR032317 RND efflux pump, membrane fusion protein, barrel-sandwich domain CDA09_15695 13b31921fae2b14b5d1e5b5c7af06a62 399 Gene3D G3DSA:2.40.50.100 67 211 5.1E-111 T 01-11-2018 CDA09_15695 13b31921fae2b14b5d1e5b5c7af06a62 399 Gene3D G3DSA:2.40.420.20 308 377 5.1E-111 T 01-11-2018 CDA09_15695 13b31921fae2b14b5d1e5b5c7af06a62 399 TIGRFAM TIGR01730 RND_mfp: efflux transporter, RND family, MFP subunit 43 379 1.1E-86 T 01-11-2018 IPR006143 RND efflux pump, membrane fusion protein GO:0005215|GO:0016020|GO:0055085 CDA09_15695 13b31921fae2b14b5d1e5b5c7af06a62 399 SUPERFAMILY SSF111369 56 304 1.83E-87 T 01-11-2018 CDA09_21790 47c62c1b71338f574089ef45f83ce602 287 ProSitePatterns PS00067 3-hydroxyacyl-CoA dehydrogenase signature. 182 206 - T 01-11-2018 IPR006180 3-hydroxyacyl-CoA dehydrogenase, conserved site GO:0003857|GO:0006631|GO:0016491|GO:0055114 KEGG: 00062+4.2.1.17+1.1.1.35|KEGG: 00071+5.1.2.3+4.2.1.17+1.1.1.35|KEGG: 00120+1.1.1.35|KEGG: 00280+4.2.1.17+1.1.1.35|KEGG: 00281+4.2.1.17+1.1.1.35|KEGG: 00310+4.2.1.17+1.1.1.35|KEGG: 00360+4.2.1.17|KEGG: 00362+4.2.1.17+1.1.1.35|KEGG: 00380+4.2.1.17+1.1.1.35|KEGG: 00410+4.2.1.17|KEGG: 00592+4.2.1.17|KEGG: 00623+1.1.1.35|KEGG: 00627+4.2.1.17|KEGG: 00640+4.2.1.17|KEGG: 00650+5.1.2.3+4.2.1.17+1.1.1.35|KEGG: 00720+4.2.1.17+1.1.1.35|KEGG: 00903+4.2.1.17|KEGG: 00930+4.2.1.17+1.1.1.35|MetaCyc: PWY-1361|MetaCyc: PWY-5109|MetaCyc: PWY-5136|MetaCyc: PWY-5138|MetaCyc: PWY-5177|MetaCyc: PWY-5789|MetaCyc: PWY-6435|MetaCyc: PWY-6583|MetaCyc: PWY-6863|MetaCyc: PWY-6883|MetaCyc: PWY-6944|MetaCyc: PWY-6945|MetaCyc: PWY-6946|MetaCyc: PWY-7007|MetaCyc: PWY-7046|MetaCyc: PWY-7094|MetaCyc: PWY-7216|MetaCyc: PWY-735|MetaCyc: PWY-7401|MetaCyc: PWY-7606|MetaCyc: PWY-7654|MetaCyc: PWY-7656|MetaCyc: PWY-7726|MetaCyc: PWY-7778|MetaCyc: PWY-7779 CDA09_21790 47c62c1b71338f574089ef45f83ce602 287 SUPERFAMILY SSF51735 2 182 3.61E-49 T 01-11-2018 IPR036291 NAD(P)-binding domain superfamily CDA09_21790 47c62c1b71338f574089ef45f83ce602 287 Gene3D G3DSA:3.40.50.720 1 187 5.5E-60 T 01-11-2018 CDA09_21790 47c62c1b71338f574089ef45f83ce602 287 PIRSF PIRSF000105 1 287 1.6E-90 T 01-11-2018 IPR022694 3-hydroxyacyl-CoA dehydrogenase GO:0003857|GO:0006631|GO:0055114|GO:0070403 CDA09_21790 47c62c1b71338f574089ef45f83ce602 287 Gene3D G3DSA:1.10.1040.10 188 287 1.2E-32 T 01-11-2018 IPR013328 6-phosphogluconate dehydrogenase, domain 2 GO:0016491|GO:0055114 CDA09_21790 47c62c1b71338f574089ef45f83ce602 287 SUPERFAMILY SSF48179 184 285 1.19E-28 T 01-11-2018 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily GO:0055114 CDA09_21790 47c62c1b71338f574089ef45f83ce602 287 Pfam PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain 185 281 6.0E-30 T 01-11-2018 IPR006108 3-hydroxyacyl-CoA dehydrogenase, C-terminal GO:0003857|GO:0006631|GO:0016491|GO:0055114 KEGG: 00062+4.2.1.17+1.1.1.35|KEGG: 00071+4.2.1.17+1.1.1.35|KEGG: 00120+1.1.1.35|KEGG: 00280+4.2.1.17+1.1.1.35|KEGG: 00281+4.2.1.17+1.1.1.35|KEGG: 00310+4.2.1.17+1.1.1.35|KEGG: 00360+4.2.1.17|KEGG: 00362+4.2.1.17+1.1.1.35|KEGG: 00380+4.2.1.17+1.1.1.35|KEGG: 00410+4.2.1.17|KEGG: 00592+4.2.1.17|KEGG: 00623+1.1.1.35|KEGG: 00627+4.2.1.17|KEGG: 00640+4.2.1.17|KEGG: 00650+4.2.1.17+1.1.1.35|KEGG: 00720+4.2.1.17+1.1.1.35|KEGG: 00903+4.2.1.17|KEGG: 00930+4.2.1.17+1.1.1.35|MetaCyc: PWY-1361|MetaCyc: PWY-5109|MetaCyc: PWY-5136|MetaCyc: PWY-5138|MetaCyc: PWY-5177|MetaCyc: PWY-5789|MetaCyc: PWY-6435|MetaCyc: PWY-6583|MetaCyc: PWY-6863|MetaCyc: PWY-6883|MetaCyc: PWY-6944|MetaCyc: PWY-6945|MetaCyc: PWY-6946|MetaCyc: PWY-7007|MetaCyc: PWY-7046|MetaCyc: PWY-7094|MetaCyc: PWY-7216|MetaCyc: PWY-735|MetaCyc: PWY-7401|MetaCyc: PWY-7606|MetaCyc: PWY-7654|MetaCyc: PWY-7656|MetaCyc: PWY-7726|MetaCyc: PWY-7778|MetaCyc: PWY-7779 CDA09_21790 47c62c1b71338f574089ef45f83ce602 287 Pfam PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain 3 181 3.5E-56 T 01-11-2018 IPR006176 3-hydroxyacyl-CoA dehydrogenase, NAD binding GO:0003857|GO:0006631|GO:0016491|GO:0055114 KEGG: 00062+4.2.1.17+1.1.1.35|KEGG: 00071+4.2.1.17+1.1.1.35|KEGG: 00120+1.1.1.35|KEGG: 00280+4.2.1.17+1.1.1.35|KEGG: 00281+4.2.1.17+1.1.1.35|KEGG: 00310+4.2.1.17+1.1.1.35|KEGG: 00360+4.2.1.17|KEGG: 00362+4.2.1.17+1.1.1.35|KEGG: 00380+4.2.1.17+1.1.1.35|KEGG: 00410+4.2.1.17|KEGG: 00592+4.2.1.17|KEGG: 00623+1.1.1.35|KEGG: 00627+4.2.1.17|KEGG: 00640+4.2.1.17|KEGG: 00650+4.2.1.17+1.1.1.35|KEGG: 00720+4.2.1.17+1.1.1.35|KEGG: 00903+4.2.1.17|KEGG: 00930+4.2.1.17+1.1.1.35|MetaCyc: PWY-1361|MetaCyc: PWY-5109|MetaCyc: PWY-5136|MetaCyc: PWY-5138|MetaCyc: PWY-5177|MetaCyc: PWY-5789|MetaCyc: PWY-6435|MetaCyc: PWY-6583|MetaCyc: PWY-6863|MetaCyc: PWY-6883|MetaCyc: PWY-6944|MetaCyc: PWY-6945|MetaCyc: PWY-6946|MetaCyc: PWY-7007|MetaCyc: PWY-7046|MetaCyc: PWY-7094|MetaCyc: PWY-7216|MetaCyc: PWY-735|MetaCyc: PWY-7401|MetaCyc: PWY-7606|MetaCyc: PWY-7654|MetaCyc: PWY-7656|MetaCyc: PWY-7726|MetaCyc: PWY-7778|MetaCyc: PWY-7779 CDA09_17495 ba623b586a5cc07eb6819ca0c65b4206 165 SMART SM00344 19 127 0.0055 T 01-11-2018 IPR019888 Transcription regulator AsnC-type GO:0003700|GO:0005622|GO:0006355|GO:0043565 CDA09_17495 ba623b586a5cc07eb6819ca0c65b4206 165 Gene3D G3DSA:1.10.10.10 18 71 3.6E-8 T 01-11-2018 IPR036388 Winged helix-like DNA-binding domain superfamily CDA09_17495 ba623b586a5cc07eb6819ca0c65b4206 165 Pfam PF13404 AsnC-type helix-turn-helix domain 19 62 9.2E-12 T 01-11-2018 IPR000485 AsnC-type HTH domain GO:0043565 CDA09_17495 ba623b586a5cc07eb6819ca0c65b4206 165 Gene3D G3DSA:3.30.70.3460 84 162 8.5E-16 T 01-11-2018 CDA09_06115 8d85859efdd2e62959ec399c72828890 109 Pfam PF03413 Peptidase propeptide and YPEB domain 45 99 1.0E-8 T 01-11-2018 IPR025711 PepSY domain CDA09_06115 8d85859efdd2e62959ec399c72828890 109 Gene3D G3DSA:3.10.450.40 45 102 9.6E-9 T 01-11-2018 CDA09_15880 55746401040a53e1ab5c2b50e87b5ad2 129 SUPERFAMILY SSF54427 27 127 9.13E-34 T 01-11-2018 IPR032710 NTF2-like domain superfamily CDA09_15880 55746401040a53e1ab5c2b50e87b5ad2 129 Gene3D G3DSA:3.10.450.50 4 129 2.1E-37 T 01-11-2018 CDA09_15880 55746401040a53e1ab5c2b50e87b5ad2 129 Pfam PF02810 SEC-C motif 5 20 5.7E-6 T 01-11-2018 IPR004027 SEC-C motif CDA09_15880 55746401040a53e1ab5c2b50e87b5ad2 129 Hamap MF_00612 UPF0225 protein YchJ [ychJ]. 2 126 26.078 T 01-11-2018 IPR023006 Uncharacterised protein family UPF0225 CDA09_06005 ee4800d91d0690b7933c9187a7e96431 307 Pfam PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain 5 145 2.8E-46 T 01-11-2018 IPR006132 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding GO:0006520|GO:0016743 CDA09_06005 ee4800d91d0690b7933c9187a7e96431 307 Pfam PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain 151 299 7.2E-47 T 01-11-2018 IPR006131 Aspartate/ornithine carbamoyltransferase, Asp/Orn-binding domain GO:0006520|GO:0016597|GO:0016743 CDA09_06005 ee4800d91d0690b7933c9187a7e96431 307 Hamap MF_01109 Ornithine carbamoyltransferase, catabolic [argI]. 4 302 75.043 T 01-11-2018 IPR024904 Ornithine carbamoyltransferase GO:0004585|GO:0006591 KEGG: 00220+2.1.3.3|MetaCyc: PWY-4981|MetaCyc: PWY-4984|MetaCyc: PWY-7400 CDA09_06005 ee4800d91d0690b7933c9187a7e96431 307 PRINTS PR00102 Ornithine carbamoyltransferase signature 48 62 8.2E-29 T 01-11-2018 IPR002292 Ornithine/putrescine carbamoyltransferase GO:0016743 KEGG: 00220+2.1.3.3|MetaCyc: PWY-4981|MetaCyc: PWY-4984|MetaCyc: PWY-7400|Reactome: R-HSA-1268020|Reactome: R-HSA-70635 CDA09_06005 ee4800d91d0690b7933c9187a7e96431 307 PRINTS PR00102 Ornithine carbamoyltransferase signature 280 291 8.2E-29 T 01-11-2018 IPR002292 Ornithine/putrescine carbamoyltransferase GO:0016743 KEGG: 00220+2.1.3.3|MetaCyc: PWY-4981|MetaCyc: PWY-4984|MetaCyc: PWY-7400|Reactome: R-HSA-1268020|Reactome: R-HSA-70635 CDA09_06005 ee4800d91d0690b7933c9187a7e96431 307 PRINTS PR00102 Ornithine carbamoyltransferase signature 81 94 8.2E-29 T 01-11-2018 IPR002292 Ornithine/putrescine carbamoyltransferase GO:0016743 KEGG: 00220+2.1.3.3|MetaCyc: PWY-4981|MetaCyc: PWY-4984|MetaCyc: PWY-7400|Reactome: R-HSA-1268020|Reactome: R-HSA-70635 CDA09_06005 ee4800d91d0690b7933c9187a7e96431 307 PRINTS PR00102 Ornithine carbamoyltransferase signature 121 135 8.2E-29 T 01-11-2018 IPR002292 Ornithine/putrescine carbamoyltransferase GO:0016743 KEGG: 00220+2.1.3.3|MetaCyc: PWY-4981|MetaCyc: PWY-4984|MetaCyc: PWY-7400|Reactome: R-HSA-1268020|Reactome: R-HSA-70635 CDA09_06005 ee4800d91d0690b7933c9187a7e96431 307 PRINTS PR00102 Ornithine carbamoyltransferase signature 218 228 8.2E-29 T 01-11-2018 IPR002292 Ornithine/putrescine carbamoyltransferase GO:0016743 KEGG: 00220+2.1.3.3|MetaCyc: PWY-4981|MetaCyc: PWY-4984|MetaCyc: PWY-7400|Reactome: R-HSA-1268020|Reactome: R-HSA-70635 CDA09_06005 ee4800d91d0690b7933c9187a7e96431 307 Gene3D G3DSA:3.40.50.1370 6 298 7.1E-111 T 01-11-2018 IPR036901 Aspartate/ornithine carbamoyltransferase superfamily GO:0006520|GO:0016597|GO:0016743 CDA09_06005 ee4800d91d0690b7933c9187a7e96431 307 SUPERFAMILY SSF53671 3 301 4.06E-101 T 01-11-2018 IPR036901 Aspartate/ornithine carbamoyltransferase superfamily GO:0006520|GO:0016597|GO:0016743 CDA09_06005 ee4800d91d0690b7933c9187a7e96431 307 Gene3D G3DSA:3.40.50.1370 135 288 7.1E-111 T 01-11-2018 IPR036901 Aspartate/ornithine carbamoyltransferase superfamily GO:0006520|GO:0016597|GO:0016743 CDA09_06005 ee4800d91d0690b7933c9187a7e96431 307 ProSitePatterns PS00097 Aspartate and ornithine carbamoyltransferases signature. 50 57 - T 01-11-2018 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 CDA09_06005 ee4800d91d0690b7933c9187a7e96431 307 TIGRFAM TIGR00658 orni_carb_tr: ornithine carbamoyltransferase 5 301 9.3E-106 T 01-11-2018 IPR002292 Ornithine/putrescine carbamoyltransferase GO:0016743 KEGG: 00220+2.1.3.3|MetaCyc: PWY-4981|MetaCyc: PWY-4984|MetaCyc: PWY-7400|Reactome: R-HSA-1268020|Reactome: R-HSA-70635 CDA09_06005 ee4800d91d0690b7933c9187a7e96431 307 PRINTS PR00100 Aspartate/ornithine carbamoyltransferase superfamily signature 50 69 1.2E-27 T 01-11-2018 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 CDA09_06005 ee4800d91d0690b7933c9187a7e96431 307 PRINTS PR00100 Aspartate/ornithine carbamoyltransferase superfamily signature 132 143 1.2E-27 T 01-11-2018 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 CDA09_06005 ee4800d91d0690b7933c9187a7e96431 307 PRINTS PR00100 Aspartate/ornithine carbamoyltransferase superfamily signature 266 289 1.2E-27 T 01-11-2018 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 CDA09_06005 ee4800d91d0690b7933c9187a7e96431 307 PRINTS PR00100 Aspartate/ornithine carbamoyltransferase superfamily signature 254 263 1.2E-27 T 01-11-2018 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 CDA09_09725 e9afd34ff472239a9b95d8e801e90235 279 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 97 108 4.6E-7 T 01-11-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CDA09_09725 e9afd34ff472239a9b95d8e801e90235 279 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 153 161 4.6E-7 T 01-11-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CDA09_09725 e9afd34ff472239a9b95d8e801e90235 279 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 180 199 4.6E-7 T 01-11-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CDA09_09725 e9afd34ff472239a9b95d8e801e90235 279 Pfam PF00106 short chain dehydrogenase 3 47 2.8E-8 T 01-11-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CDA09_09725 e9afd34ff472239a9b95d8e801e90235 279 Pfam PF00106 short chain dehydrogenase 58 219 1.0E-29 T 01-11-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CDA09_09725 e9afd34ff472239a9b95d8e801e90235 279 SUPERFAMILY SSF51735 3 252 5.71E-53 T 01-11-2018 IPR036291 NAD(P)-binding domain superfamily CDA09_09725 e9afd34ff472239a9b95d8e801e90235 279 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 58 75 3.3E-17 T 01-11-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CDA09_09725 e9afd34ff472239a9b95d8e801e90235 279 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 97 108 3.3E-17 T 01-11-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CDA09_09725 e9afd34ff472239a9b95d8e801e90235 279 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 180 199 3.3E-17 T 01-11-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CDA09_09725 e9afd34ff472239a9b95d8e801e90235 279 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 201 218 3.3E-17 T 01-11-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CDA09_09725 e9afd34ff472239a9b95d8e801e90235 279 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 147 163 3.3E-17 T 01-11-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CDA09_09725 e9afd34ff472239a9b95d8e801e90235 279 Gene3D G3DSA:3.40.50.720 1 272 2.0E-58 T 01-11-2018 CDA09_09725 e9afd34ff472239a9b95d8e801e90235 279 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 167 195 - T 01-11-2018 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 CDA09_03900 bf2a8ab431d76aa48fa1bb9ffde5e328 205 TIGRFAM TIGR00152 TIGR00152: dephospho-CoA kinase 7 191 5.8E-47 T 01-11-2018 IPR001977 Dephospho-CoA kinase GO:0004140|GO:0005524|GO:0015937 KEGG: 00770+2.7.1.24|MetaCyc: PWY-7851 CDA09_03900 bf2a8ab431d76aa48fa1bb9ffde5e328 205 SUPERFAMILY SSF52540 6 196 6.12E-38 T 01-11-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CDA09_03900 bf2a8ab431d76aa48fa1bb9ffde5e328 205 Gene3D G3DSA:3.40.50.300 3 204 6.2E-69 T 01-11-2018 CDA09_03900 bf2a8ab431d76aa48fa1bb9ffde5e328 205 Pfam PF01121 Dephospho-CoA kinase 6 182 1.2E-61 T 01-11-2018 IPR001977 Dephospho-CoA kinase GO:0004140|GO:0005524|GO:0015937 KEGG: 00770+2.7.1.24|MetaCyc: PWY-7851 CDA09_03900 bf2a8ab431d76aa48fa1bb9ffde5e328 205 Hamap MF_00376 Dephospho-CoA kinase [coaE]. 5 200 27.697 T 01-11-2018 IPR001977 Dephospho-CoA kinase GO:0004140|GO:0005524|GO:0015937 KEGG: 00770+2.7.1.24|MetaCyc: PWY-7851 CDA09_11890 80d21a0d3e3faf708d6f14810a4b8d90 170 Gene3D G3DSA:3.40.30.10 2 155 2.4E-40 T 01-11-2018 CDA09_11890 80d21a0d3e3faf708d6f14810a4b8d90 170 SUPERFAMILY SSF52833 1 156 8.89E-46 T 01-11-2018 IPR036249 Thioredoxin-like superfamily CDA09_11890 80d21a0d3e3faf708d6f14810a4b8d90 170 Pfam PF00578 AhpC/TSA family 4 133 7.6E-34 T 01-11-2018 IPR000866 Alkyl hydroperoxide reductase subunit C/ Thiol specific antioxidant GO:0016209|GO:0016491|GO:0055114 KEGG: 00480+1.11.1.15|Reactome: R-HSA-3299685 CDA09_11890 80d21a0d3e3faf708d6f14810a4b8d90 170 PIRSF PIRSF000239 1 166 9.6E-24 T 01-11-2018 IPR024706 Peroxiredoxin, AhpC-type KEGG: 00480+1.11.1.15|Reactome: R-HSA-3299685 CDA09_11305 978a25a54421b6d0a2b888d181803fc5 303 SUPERFAMILY SSF53223 4 98 6.04E-38 T 01-11-2018 CDA09_11305 978a25a54421b6d0a2b888d181803fc5 303 Gene3D G3DSA:3.40.50.10280 6 293 1.0E-99 T 01-11-2018 IPR037089 Methylene-tetrahydromethanopterin dehydrogenase, N-terminal domain superfamily CDA09_11305 978a25a54421b6d0a2b888d181803fc5 303 Gene3D G3DSA:3.40.50.720 107 264 1.0E-99 T 01-11-2018 CDA09_11305 978a25a54421b6d0a2b888d181803fc5 303 Pfam PF09176 Methylene-tetrahydromethanopterin dehydrogenase, N-terminal 18 98 4.6E-38 T 01-11-2018 IPR015259 Methylene-tetrahydromethanopterin dehydrogenase, N-terminal CDA09_11305 978a25a54421b6d0a2b888d181803fc5 303 SUPERFAMILY SSF51735 114 229 5.2E-11 T 01-11-2018 IPR036291 NAD(P)-binding domain superfamily CDA09_17055 9040bf11dd15349bada52bce634ba238 111 Pfam PF07110 EthD domain 13 85 6.7E-10 T 01-11-2018 IPR009799 EthD domain CDA09_17055 9040bf11dd15349bada52bce634ba238 111 Gene3D G3DSA:3.30.70.100 3 98 5.0E-15 T 01-11-2018 CDA09_17055 9040bf11dd15349bada52bce634ba238 111 TIGRFAM TIGR02118 TIGR02118: conserved hypothetical protein 15 103 2.6E-12 T 01-11-2018 IPR009799 EthD domain CDA09_17055 9040bf11dd15349bada52bce634ba238 111 SUPERFAMILY SSF54909 5 103 1.34E-19 T 01-11-2018 IPR011008 Dimeric alpha-beta barrel CDA09_15405 5fd37c72a14286b701e856e8390ea3f2 224 Pfam PF12796 Ankyrin repeats (3 copies) 41 123 3.7E-13 T 01-11-2018 IPR020683 Ankyrin repeat-containing domain CDA09_15405 5fd37c72a14286b701e856e8390ea3f2 224 SMART SM00248 125 154 1.5E-4 T 01-11-2018 IPR002110 Ankyrin repeat GO:0005515 CDA09_15405 5fd37c72a14286b701e856e8390ea3f2 224 SMART SM00248 191 221 670.0 T 01-11-2018 IPR002110 Ankyrin repeat GO:0005515 CDA09_15405 5fd37c72a14286b701e856e8390ea3f2 224 SMART SM00248 62 91 0.01 T 01-11-2018 IPR002110 Ankyrin repeat GO:0005515 CDA09_15405 5fd37c72a14286b701e856e8390ea3f2 224 SMART SM00248 158 187 4.5E-5 T 01-11-2018 IPR002110 Ankyrin repeat GO:0005515 CDA09_15405 5fd37c72a14286b701e856e8390ea3f2 224 SMART SM00248 95 124 0.028 T 01-11-2018 IPR002110 Ankyrin repeat GO:0005515 CDA09_15405 5fd37c72a14286b701e856e8390ea3f2 224 Gene3D G3DSA:1.25.40.20 121 224 3.8E-28 T 01-11-2018 IPR036770 Ankyrin repeat-containing domain superfamily CDA09_15405 5fd37c72a14286b701e856e8390ea3f2 224 Pfam PF13637 Ankyrin repeats (many copies) 161 211 1.2E-8 T 01-11-2018 CDA09_15405 5fd37c72a14286b701e856e8390ea3f2 224 Pfam PF00023 Ankyrin repeat 125 155 5.0E-6 T 01-11-2018 IPR002110 Ankyrin repeat GO:0005515 CDA09_15405 5fd37c72a14286b701e856e8390ea3f2 224 SUPERFAMILY SSF48403 37 212 1.66E-46 T 01-11-2018 IPR036770 Ankyrin repeat-containing domain superfamily CDA09_15405 5fd37c72a14286b701e856e8390ea3f2 224 PRINTS PR01415 Ankyrin repeat signature 126 141 7.7E-5 T 01-11-2018 IPR002110 Ankyrin repeat GO:0005515 CDA09_15405 5fd37c72a14286b701e856e8390ea3f2 224 PRINTS PR01415 Ankyrin repeat signature 174 188 7.7E-5 T 01-11-2018 IPR002110 Ankyrin repeat GO:0005515 CDA09_15405 5fd37c72a14286b701e856e8390ea3f2 224 Gene3D G3DSA:1.25.40.20 19 120 1.3E-23 T 01-11-2018 IPR036770 Ankyrin repeat-containing domain superfamily CDA09_10865 673e685cb66bc37d44591e9c7478f400 711 SMART SM00448 6 119 1.4E-13 T 01-11-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 CDA09_10865 673e685cb66bc37d44591e9c7478f400 711 SUPERFAMILY SSF55785 152 263 8.03E-22 T 01-11-2018 IPR035965 PAS domain superfamily CDA09_10865 673e685cb66bc37d44591e9c7478f400 711 Pfam PF00990 Diguanylate cyclase, GGDEF domain 272 426 5.3E-39 T 01-11-2018 IPR000160 GGDEF domain CDA09_10865 673e685cb66bc37d44591e9c7478f400 711 SUPERFAMILY SSF52172 4 162 1.57E-23 T 01-11-2018 IPR011006 CheY-like superfamily CDA09_10865 673e685cb66bc37d44591e9c7478f400 711 Pfam PF00072 Response regulator receiver domain 8 119 3.5E-11 T 01-11-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 CDA09_10865 673e685cb66bc37d44591e9c7478f400 711 SMART SM00091 144 212 2.2E-7 T 01-11-2018 IPR000014 PAS domain CDA09_10865 673e685cb66bc37d44591e9c7478f400 711 Pfam PF08447 PAS fold 167 253 2.0E-19 T 01-11-2018 IPR013655 PAS fold-3 GO:0005515 CDA09_10865 673e685cb66bc37d44591e9c7478f400 711 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 140 268 2.6E-14 T 01-11-2018 IPR000014 PAS domain CDA09_10865 673e685cb66bc37d44591e9c7478f400 711 Gene3D G3DSA:3.30.70.270 266 442 6.2E-52 T 01-11-2018 CDA09_10865 673e685cb66bc37d44591e9c7478f400 711 Gene3D G3DSA:3.40.50.2300 4 141 1.1E-16 T 01-11-2018 CDA09_10865 673e685cb66bc37d44591e9c7478f400 711 SMART SM00086 219 261 1.8E-6 T 01-11-2018 IPR001610 PAC motif CDA09_10865 673e685cb66bc37d44591e9c7478f400 711 Pfam PF00563 EAL domain 448 683 2.8E-72 T 01-11-2018 IPR001633 EAL domain CDA09_10865 673e685cb66bc37d44591e9c7478f400 711 Gene3D G3DSA:3.30.450.20 142 213 1.0E-23 T 01-11-2018 CDA09_10865 673e685cb66bc37d44591e9c7478f400 711 SMART SM00052 441 688 1.4E-107 T 01-11-2018 IPR001633 EAL domain CDA09_10865 673e685cb66bc37d44591e9c7478f400 711 Gene3D G3DSA:2.10.70.100 216 262 1.1E-10 T 01-11-2018 CDA09_10865 673e685cb66bc37d44591e9c7478f400 711 SMART SM00267 261 431 2.0E-51 T 01-11-2018 IPR000160 GGDEF domain CDA09_10865 673e685cb66bc37d44591e9c7478f400 711 Gene3D G3DSA:3.20.20.450 443 696 3.1E-100 T 01-11-2018 IPR035919 EAL domain superfamily CDA09_10865 673e685cb66bc37d44591e9c7478f400 711 SUPERFAMILY SSF141868 446 696 4.45E-86 T 01-11-2018 IPR035919 EAL domain superfamily CDA09_10865 673e685cb66bc37d44591e9c7478f400 711 SUPERFAMILY SSF55073 277 432 9.42E-41 T 01-11-2018 IPR029787 Nucleotide cyclase CDA09_10865 673e685cb66bc37d44591e9c7478f400 711 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 268 431 2.1E-33 T 01-11-2018 IPR000160 GGDEF domain CDA09_18460 d86ea393bb5fa23c6f19425eb6516ce4 487 Gene3D G3DSA:2.60.120.10 360 467 8.5E-18 T 01-11-2018 IPR014710 RmlC-like jelly roll fold CDA09_18460 d86ea393bb5fa23c6f19425eb6516ce4 487 TIGRFAM TIGR01479 GMP_PMI: mannose-1-phosphate guanylyltransferase/mannose-6-phosphate isomerase 2 479 1.8E-202 T 01-11-2018 IPR006375 Mannose-1-phosphate guanylyltransferase/mannose-6-phosphate isomerase GO:0000271|GO:0016779 KEGG: 00051+2.7.7.13|KEGG: 00520+2.7.7.13|MetaCyc: PWY-5659|MetaCyc: PWY-882 CDA09_18460 d86ea393bb5fa23c6f19425eb6516ce4 487 SUPERFAMILY SSF53448 1 290 1.62E-64 T 01-11-2018 IPR029044 Nucleotide-diphospho-sugar transferases CDA09_18460 d86ea393bb5fa23c6f19425eb6516ce4 487 Pfam PF00483 Nucleotidyl transferase 4 296 5.8E-62 T 01-11-2018 IPR005835 Nucleotidyl transferase domain GO:0009058|GO:0016779 CDA09_18460 d86ea393bb5fa23c6f19425eb6516ce4 487 SUPERFAMILY SSF51182 188 480 7.33E-85 T 01-11-2018 IPR011051 RmlC-like cupin domain superfamily CDA09_18460 d86ea393bb5fa23c6f19425eb6516ce4 487 Gene3D G3DSA:3.90.550.10 1 359 3.1E-111 T 01-11-2018 IPR029044 Nucleotide-diphospho-sugar transferases CDA09_18460 d86ea393bb5fa23c6f19425eb6516ce4 487 Pfam PF01050 Mannose-6-phosphate isomerase 325 475 1.7E-72 T 01-11-2018 IPR001538 Mannose-6-phosphate isomerase, type II, C-terminal GO:0005976|GO:0016779 KEGG: 00051+2.7.7.13|KEGG: 00520+2.7.7.13|MetaCyc: PWY-5659|MetaCyc: PWY-882 CDA09_20115 9af7bdf943ed7e6a4ff220584a705b5d 435 SUPERFAMILY SSF53335 235 396 4.42E-26 T 01-11-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase CDA09_20115 9af7bdf943ed7e6a4ff220584a705b5d 435 Pfam PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases 6 212 2.0E-20 T 01-11-2018 IPR000878 Tetrapyrrole methylase GO:0008168 Reactome: R-HSA-5358493 CDA09_20115 9af7bdf943ed7e6a4ff220584a705b5d 435 TIGRFAM TIGR02467 CbiE: precorrin-6y C5,15-methyltransferase (decarboxylating), CbiE subunit 8 224 4.7E-46 T 01-11-2018 IPR012818 Cobalamin (vitamin B12) biosynthesis CbiE, precorrin-6Y methyltransferase GO:0008276|GO:0009236 CDA09_20115 9af7bdf943ed7e6a4ff220584a705b5d 435 PIRSF PIRSF036428 1 427 6.7E-93 T 01-11-2018 IPR006365 Cobalamin (vitamin B12) biosynthesis CobL/Precorrin-6Y C(5,15)-methyltransferase GO:0008276|GO:0009236 KEGG: 00860+2.1.1.132 CDA09_20115 9af7bdf943ed7e6a4ff220584a705b5d 435 Pfam PF01135 Protein-L-isoaspartate(D-aspartate) O-methyltransferase (PCMT) 255 371 2.4E-4 T 01-11-2018 CDA09_20115 9af7bdf943ed7e6a4ff220584a705b5d 435 Gene3D G3DSA:3.40.1010.10 5 110 3.0E-9 T 01-11-2018 IPR014777 Tetrapyrrole methylase, subdomain 1 GO:0008168 Reactome: R-HSA-5358493 CDA09_20115 9af7bdf943ed7e6a4ff220584a705b5d 435 SUPERFAMILY SSF53790 8 226 1.6E-27 T 01-11-2018 IPR035996 Tetrapyrrole methylase superfamily GO:0008168 Reactome: R-HSA-5358493 CDA09_20115 9af7bdf943ed7e6a4ff220584a705b5d 435 Gene3D G3DSA:3.40.50.150 232 434 5.0E-67 T 01-11-2018 CDA09_20115 9af7bdf943ed7e6a4ff220584a705b5d 435 TIGRFAM TIGR02469 CbiT: precorrin-6Y C5,15-methyltransferase (decarboxylating), CbiT subunit 254 375 1.8E-34 T 01-11-2018 IPR014008 Cobalamin biosynthesis, precorrin-6Y methyltransferase, CbiT subunit GO:0008276|GO:0009236 KEGG: 00860+2.1.1.196|MetaCyc: PWY-7377 CDA09_14905 e82dcf65f76875d7ac9d30036c55c2cf 1175 SUPERFAMILY SSF75553 480 674 9.55E-5 T 01-11-2018 IPR036277 SMCs flexible hinge superfamily GO:0005515|GO:0005524|GO:0005694|GO:0051276 CDA09_14905 e82dcf65f76875d7ac9d30036c55c2cf 1175 PIRSF PIRSF005719 1 1171 6.3E-238 T 01-11-2018 IPR024704 Structural maintenance of chromosomes protein CDA09_14905 e82dcf65f76875d7ac9d30036c55c2cf 1175 Gene3D G3DSA:3.40.50.300 1 256 4.6E-46 T 01-11-2018 CDA09_14905 e82dcf65f76875d7ac9d30036c55c2cf 1175 SUPERFAMILY SSF52540 2 1166 1.36E-60 T 01-11-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CDA09_14905 e82dcf65f76875d7ac9d30036c55c2cf 1175 Pfam PF02463 RecF/RecN/SMC N terminal domain 3 1156 2.6E-62 T 01-11-2018 IPR003395 RecF/RecN/SMC, N-terminal CDA09_14905 e82dcf65f76875d7ac9d30036c55c2cf 1175 Hamap MF_01894 Chromosome partition protein Smc [smc]. 1 1165 22.023 T 01-11-2018 IPR011890 Structural maintenance of chromosomes protein, prokaryotic GO:0007062|GO:0030261 CDA09_14905 e82dcf65f76875d7ac9d30036c55c2cf 1175 Gene3D G3DSA:3.40.50.300 1011 1174 7.4E-47 T 01-11-2018 CDA09_14905 e82dcf65f76875d7ac9d30036c55c2cf 1175 TIGRFAM TIGR02168 SMC_prok_B: chromosome segregation protein SMC 2 1163 0.0 T 01-11-2018 IPR011890 Structural maintenance of chromosomes protein, prokaryotic GO:0007062|GO:0030261 CDA09_16630 1df493e9d8ef6adad5e68210fe5bcc8c 259 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 220 240 1.8E-28 T 01-11-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CDA09_16630 1df493e9d8ef6adad5e68210fe5bcc8c 259 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 154 173 1.8E-28 T 01-11-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CDA09_16630 1df493e9d8ef6adad5e68210fe5bcc8c 259 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 175 192 1.8E-28 T 01-11-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CDA09_16630 1df493e9d8ef6adad5e68210fe5bcc8c 259 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 6 23 1.8E-28 T 01-11-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CDA09_16630 1df493e9d8ef6adad5e68210fe5bcc8c 259 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 128 144 1.8E-28 T 01-11-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CDA09_16630 1df493e9d8ef6adad5e68210fe5bcc8c 259 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 80 91 1.8E-28 T 01-11-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CDA09_16630 1df493e9d8ef6adad5e68210fe5bcc8c 259 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 141 169 - T 01-11-2018 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 CDA09_16630 1df493e9d8ef6adad5e68210fe5bcc8c 259 TIGRFAM TIGR01963 PHB_DH: 3-hydroxybutyrate dehydrogenase 5 259 4.4E-94 T 01-11-2018 IPR011294 3-hydroxybutyrate dehydrogenase GO:0003858|GO:0055114 CDA09_16630 1df493e9d8ef6adad5e68210fe5bcc8c 259 Pfam PF00106 short chain dehydrogenase 5 197 6.3E-53 T 01-11-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CDA09_16630 1df493e9d8ef6adad5e68210fe5bcc8c 259 Gene3D G3DSA:3.40.50.720 1 259 3.1E-75 T 01-11-2018 CDA09_16630 1df493e9d8ef6adad5e68210fe5bcc8c 259 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 80 91 1.5E-9 T 01-11-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CDA09_16630 1df493e9d8ef6adad5e68210fe5bcc8c 259 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 134 142 1.5E-9 T 01-11-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CDA09_16630 1df493e9d8ef6adad5e68210fe5bcc8c 259 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 154 173 1.5E-9 T 01-11-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CDA09_16630 1df493e9d8ef6adad5e68210fe5bcc8c 259 SUPERFAMILY SSF51735 3 258 1.06E-70 T 01-11-2018 IPR036291 NAD(P)-binding domain superfamily CDA09_16040 92a1f235a7324a8080f44f2c4791896a 106 Pfam PF08992 Quinohemoprotein amine dehydrogenase, gamma subunit 31 104 1.9E-43 T 01-11-2018 IPR015084 Quinohemoprotein amine dehydrogenase, gamma subunit, structural domain GO:0016638|GO:0055114 CDA09_16040 92a1f235a7324a8080f44f2c4791896a 106 ProDom PD591508 QUINOHEMOPROTEIN AMINE SUBUNIT DEHYDROGENASE GAMMA 1.4.99.- CATALYTIC QH-AMDH CTQ 3D-STRUCTURE 37 106 3.0E-35 T 01-11-2018 IPR015084 Quinohemoprotein amine dehydrogenase, gamma subunit, structural domain GO:0016638|GO:0055114 CDA09_16040 92a1f235a7324a8080f44f2c4791896a 106 Gene3D G3DSA:4.10.940.10 29 106 1.4E-36 T 01-11-2018 IPR036487 Quinohemoprotein amine dehydrogenase, gamma subunit structural domain superfamily CDA09_16040 92a1f235a7324a8080f44f2c4791896a 106 SUPERFAMILY SSF69131 29 106 2.62E-42 T 01-11-2018 IPR036487 Quinohemoprotein amine dehydrogenase, gamma subunit structural domain superfamily CDA09_11020 9e417be8caa69581809f8c1cc5e3d23a 353 Pfam PF01965 DJ-1/PfpI family 39 208 6.4E-14 T 01-11-2018 IPR002818 DJ-1/PfpI Reactome: R-HSA-3899300 CDA09_11020 9e417be8caa69581809f8c1cc5e3d23a 353 SUPERFAMILY SSF52317 38 226 1.34E-38 T 01-11-2018 IPR029062 Class I glutamine amidotransferase-like CDA09_11020 9e417be8caa69581809f8c1cc5e3d23a 353 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 331 347 1.6E-5 T 01-11-2018 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 CDA09_11020 9e417be8caa69581809f8c1cc5e3d23a 353 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 316 331 1.6E-5 T 01-11-2018 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 CDA09_11020 9e417be8caa69581809f8c1cc5e3d23a 353 ProSitePatterns PS00041 Bacterial regulatory proteins, araC family signature. 301 343 - T 01-11-2018 IPR018062 HTH domain AraC-type, conserved site GO:0003700|GO:0006355|GO:0043565 CDA09_11020 9e417be8caa69581809f8c1cc5e3d23a 353 Gene3D G3DSA:3.40.50.880 37 231 8.9E-48 T 01-11-2018 IPR029062 Class I glutamine amidotransferase-like CDA09_11020 9e417be8caa69581809f8c1cc5e3d23a 353 SUPERFAMILY SSF46689 301 350 5.38E-13 T 01-11-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 CDA09_11020 9e417be8caa69581809f8c1cc5e3d23a 353 SMART SM00342 264 347 2.7E-30 T 01-11-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 CDA09_11020 9e417be8caa69581809f8c1cc5e3d23a 353 Pfam PF12833 Helix-turn-helix domain 270 347 6.2E-24 T 01-11-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 CDA09_11020 9e417be8caa69581809f8c1cc5e3d23a 353 SUPERFAMILY SSF46689 248 298 6.36E-8 T 01-11-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 CDA09_11020 9e417be8caa69581809f8c1cc5e3d23a 353 Gene3D G3DSA:1.10.10.60 245 352 6.4E-35 T 01-11-2018 CDA09_02680 ed1932b7be74573f003df2d7c1115d7e 212 Pfam PF02589 LUD domain 115 211 1.1E-21 T 01-11-2018 IPR003741 LUD domain CDA09_02680 ed1932b7be74573f003df2d7c1115d7e 212 Gene3D G3DSA:3.40.50.10420 41 212 1.0E-35 T 01-11-2018 IPR024185 5-formyltetrahydrofolate cyclo-ligase-like domain superfamily CDA09_02680 ed1932b7be74573f003df2d7c1115d7e 212 SUPERFAMILY SSF100950 44 211 4.14E-33 T 01-11-2018 IPR037171 NagB/RpiA transferase-like CDA09_20010 5788399bf712157458d255503eee9770 149 Pfam PF07811 TadE-like protein 14 56 1.7E-11 T 01-11-2018 IPR012495 TadE-like CDA09_20360 670696ab78a1d946ebe6ccdea61caeba 107 SMART SM01219 1 105 9.4E-43 T 01-11-2018 IPR002908 Frataxin/CyaY GO:0008199|GO:0016226 Reactome: R-HSA-1268020|Reactome: R-HSA-1362409 CDA09_20360 670696ab78a1d946ebe6ccdea61caeba 107 Pfam PF01491 Frataxin-like domain 1 101 1.5E-22 T 01-11-2018 IPR002908 Frataxin/CyaY GO:0008199|GO:0016226 Reactome: R-HSA-1268020|Reactome: R-HSA-1362409 CDA09_20360 670696ab78a1d946ebe6ccdea61caeba 107 SUPERFAMILY SSF55387 1 101 1.92E-27 T 01-11-2018 CDA09_20360 670696ab78a1d946ebe6ccdea61caeba 107 ProSitePatterns PS01344 Frataxin family signature. 49 63 - T 01-11-2018 IPR020895 Frataxin conserved site Reactome: R-HSA-1268020|Reactome: R-HSA-1362409 CDA09_20360 670696ab78a1d946ebe6ccdea61caeba 107 Hamap MF_00142 Iron-sulfur cluster assembly protein CyaY [cyaY]. 1 104 22.187 T 01-11-2018 IPR002908 Frataxin/CyaY GO:0008199|GO:0016226 Reactome: R-HSA-1268020|Reactome: R-HSA-1362409 CDA09_20360 670696ab78a1d946ebe6ccdea61caeba 107 Gene3D G3DSA:3.30.920.10 1 106 2.3E-33 T 01-11-2018 IPR036524 Frataxin/CyaY superfamily GO:0008199|GO:0016226 Reactome: R-HSA-1268020|Reactome: R-HSA-1362409 CDA09_20360 670696ab78a1d946ebe6ccdea61caeba 107 TIGRFAM TIGR03421 FeS_CyaY: iron donor protein CyaY 3 103 1.0E-32 T 01-11-2018 IPR002908 Frataxin/CyaY GO:0008199|GO:0016226 Reactome: R-HSA-1268020|Reactome: R-HSA-1362409 CDA09_20560 c8bde0f8a48f0bb41b6ecbd6eb63e757 599 SUPERFAMILY SSF90123 36 352 1.7E-19 T 01-11-2018 IPR036640 ABC transporter type 1, transmembrane domain superfamily GO:0005524|GO:0016021 CDA09_20560 c8bde0f8a48f0bb41b6ecbd6eb63e757 599 SUPERFAMILY SSF52540 375 576 3.55E-14 T 01-11-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CDA09_20560 c8bde0f8a48f0bb41b6ecbd6eb63e757 599 Pfam PF06472 ABC transporter transmembrane region 2 18 304 4.2E-47 T 01-11-2018 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0016021|GO:0042626|GO:0055085 CDA09_20560 c8bde0f8a48f0bb41b6ecbd6eb63e757 599 Gene3D G3DSA:3.40.50.300 373 592 4.2E-17 T 01-11-2018 CDA09_17375 fcbf2ce652627d29036dc909e8b7dfb2 379 Gene3D G3DSA:3.30.310.170 258 379 1.1E-11 T 01-11-2018 CDA09_17375 fcbf2ce652627d29036dc909e8b7dfb2 379 Pfam PF06804 NlpB/DapX lipoprotein 32 376 1.1E-48 T 01-11-2018 IPR010653 NlpB/DapX lipoprotein CDA09_02265 3fc91e0eff7bdfca3c4b42001350e37e 396 Pfam PF00108 Thiolase, N-terminal domain 5 266 3.9E-87 T 01-11-2018 IPR020616 Thiolase, N-terminal GO:0016747 CDA09_02265 3fc91e0eff7bdfca3c4b42001350e37e 396 Pfam PF02803 Thiolase, C-terminal domain 273 394 2.8E-44 T 01-11-2018 IPR020617 Thiolase, C-terminal GO:0016747 CDA09_02265 3fc91e0eff7bdfca3c4b42001350e37e 396 Gene3D G3DSA:3.40.47.10 127 392 3.1E-143 T 01-11-2018 IPR016039 Thiolase-like GO:0003824 CDA09_02265 3fc91e0eff7bdfca3c4b42001350e37e 396 TIGRFAM TIGR01930 AcCoA-C-Actrans: acetyl-CoA C-acyltransferase 7 394 4.3E-128 T 01-11-2018 IPR002155 Thiolase GO:0016747 CDA09_02265 3fc91e0eff7bdfca3c4b42001350e37e 396 SUPERFAMILY SSF53901 274 394 8.78E-43 T 01-11-2018 IPR016039 Thiolase-like GO:0003824 CDA09_02265 3fc91e0eff7bdfca3c4b42001350e37e 396 PIRSF PIRSF000429 1 396 5.5E-114 T 01-11-2018 IPR002155 Thiolase GO:0016747 CDA09_02265 3fc91e0eff7bdfca3c4b42001350e37e 396 Gene3D G3DSA:3.40.47.10 6 279 3.1E-143 T 01-11-2018 IPR016039 Thiolase-like GO:0003824 CDA09_02265 3fc91e0eff7bdfca3c4b42001350e37e 396 ProSitePatterns PS00099 Thiolases active site. 377 390 - T 01-11-2018 IPR020610 Thiolase, active site GO:0016747 CDA09_02265 3fc91e0eff7bdfca3c4b42001350e37e 396 SUPERFAMILY SSF53901 5 273 1.78E-79 T 01-11-2018 IPR016039 Thiolase-like GO:0003824 CDA09_12980 fdff770ea6d453b6d85687080610bb5c 114 Pfam PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit 5 99 1.6E-10 T 01-11-2018 IPR000701 Succinate dehydrogenase/fumarate reductase type B, transmembrane subunit GO:0016627 Reactome: R-HSA-611105|Reactome: R-HSA-71403 CDA09_12980 fdff770ea6d453b6d85687080610bb5c 114 PIRSF PIRSF000169 3 107 2.4E-22 T 01-11-2018 IPR014312 Succinate dehydrogenase, hydrophobic membrane anchor GO:0000104|GO:0006099|GO:0016021|GO:0020037 CDA09_12980 fdff770ea6d453b6d85687080610bb5c 114 SUPERFAMILY SSF81343 5 100 6.32E-20 T 01-11-2018 IPR034804 Fumarate reductase/succinate dehydrogenase, transmembrane subunit GO:0016020 Reactome: R-HSA-611105|Reactome: R-HSA-71403 CDA09_12980 fdff770ea6d453b6d85687080610bb5c 114 Gene3D G3DSA:1.20.1300.10 5 107 8.7E-22 T 01-11-2018 IPR034804 Fumarate reductase/succinate dehydrogenase, transmembrane subunit GO:0016020 Reactome: R-HSA-611105|Reactome: R-HSA-71403 CDA09_12980 fdff770ea6d453b6d85687080610bb5c 114 TIGRFAM TIGR02968 succ_dehyd_anc: succinate dehydrogenase, hydrophobic membrane anchor protein 6 102 1.5E-25 T 01-11-2018 IPR014312 Succinate dehydrogenase, hydrophobic membrane anchor GO:0000104|GO:0006099|GO:0016021|GO:0020037 CDA09_03415 34e9da50b7da41efeafa801b5ccc5ae7 758 Gene3D G3DSA:3.40.50.300 171 360 4.0E-67 T 01-11-2018 CDA09_03415 34e9da50b7da41efeafa801b5ccc5ae7 758 SMART SM00382 492 641 1.3E-8 T 01-11-2018 IPR003593 AAA+ ATPase domain CDA09_03415 34e9da50b7da41efeafa801b5ccc5ae7 758 SMART SM00382 211 356 2.7E-12 T 01-11-2018 IPR003593 AAA+ ATPase domain CDA09_03415 34e9da50b7da41efeafa801b5ccc5ae7 758 Gene3D G3DSA:3.40.50.300 444 656 1.0E-77 T 01-11-2018 CDA09_03415 34e9da50b7da41efeafa801b5ccc5ae7 758 Pfam PF00004 ATPase family associated with various cellular activities (AAA) 216 347 8.5E-13 T 01-11-2018 IPR003959 ATPase, AAA-type, core GO:0005524 CDA09_03415 34e9da50b7da41efeafa801b5ccc5ae7 758 SUPERFAMILY SSF52540 442 743 2.35E-77 T 01-11-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CDA09_03415 34e9da50b7da41efeafa801b5ccc5ae7 758 Gene3D G3DSA:1.10.8.60 361 443 1.9E-33 T 01-11-2018 CDA09_03415 34e9da50b7da41efeafa801b5ccc5ae7 758 Pfam PF07724 AAA domain (Cdc48 subfamily) 491 651 5.3E-47 T 01-11-2018 IPR003959 ATPase, AAA-type, core GO:0005524 CDA09_03415 34e9da50b7da41efeafa801b5ccc5ae7 758 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 538 556 2.5E-38 T 01-11-2018 IPR001270 ClpA/B family GO:0005524 CDA09_03415 34e9da50b7da41efeafa801b5ccc5ae7 758 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 567 585 2.5E-38 T 01-11-2018 IPR001270 ClpA/B family GO:0005524 CDA09_03415 34e9da50b7da41efeafa801b5ccc5ae7 758 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 496 514 2.5E-38 T 01-11-2018 IPR001270 ClpA/B family GO:0005524 CDA09_03415 34e9da50b7da41efeafa801b5ccc5ae7 758 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 600 614 2.5E-38 T 01-11-2018 IPR001270 ClpA/B family GO:0005524 CDA09_03415 34e9da50b7da41efeafa801b5ccc5ae7 758 Pfam PF10431 C-terminal, D2-small domain, of ClpB protein 658 738 4.7E-22 T 01-11-2018 IPR019489 Clp ATPase, C-terminal CDA09_03415 34e9da50b7da41efeafa801b5ccc5ae7 758 ProSitePatterns PS00870 Chaperonins clpA/B signature 1. 307 319 - T 01-11-2018 IPR018368 ClpA/B, conserved site 1 GO:0005524 CDA09_03415 34e9da50b7da41efeafa801b5ccc5ae7 758 Gene3D G3DSA:1.10.8.60 658 757 6.0E-27 T 01-11-2018 CDA09_03415 34e9da50b7da41efeafa801b5ccc5ae7 758 ProSitePatterns PS00871 Chaperonins clpA/B signature 2. 523 541 - T 01-11-2018 IPR028299 ClpA/B, conserved site 2 CDA09_03415 34e9da50b7da41efeafa801b5ccc5ae7 758 TIGRFAM TIGR02639 ClpA: ATP-dependent Clp protease ATP-binding subunit ClpA 3 739 0.0 T 01-11-2018 IPR013461 ATP-dependent Clp protease ATP-binding subunit ClpA GO:0016887|GO:0043335 CDA09_03415 34e9da50b7da41efeafa801b5ccc5ae7 758 SUPERFAMILY SSF52540 172 425 2.25E-69 T 01-11-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CDA09_03415 34e9da50b7da41efeafa801b5ccc5ae7 758 SUPERFAMILY SSF81923 1 141 5.36E-61 T 01-11-2018 IPR036628 Clp, N-terminal domain superfamily GO:0019538 CDA09_03415 34e9da50b7da41efeafa801b5ccc5ae7 758 Pfam PF02861 Clp amino terminal domain, pathogenicity island component 13 62 4.1E-15 T 01-11-2018 IPR004176 Clp, N-terminal CDA09_03415 34e9da50b7da41efeafa801b5ccc5ae7 758 SMART SM01086 658 750 7.7E-33 T 01-11-2018 IPR019489 Clp ATPase, C-terminal CDA09_03415 34e9da50b7da41efeafa801b5ccc5ae7 758 Gene3D G3DSA:1.10.1780.10 1 142 8.3E-43 T 01-11-2018 IPR036628 Clp, N-terminal domain superfamily GO:0019538 CDA09_07700 e398063eba9657f9c02c0438076f2595 562 SUPERFAMILY SSF55785 122 242 1.19E-9 T 01-11-2018 IPR035965 PAS domain superfamily CDA09_07700 e398063eba9657f9c02c0438076f2595 562 Pfam PF00512 His Kinase A (phospho-acceptor) domain 306 404 4.3E-10 T 01-11-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 CDA09_07700 e398063eba9657f9c02c0438076f2595 562 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 449 552 3.7E-22 T 01-11-2018 IPR003594 Histidine kinase/HSP90-like ATPase CDA09_07700 e398063eba9657f9c02c0438076f2595 562 Pfam PF12860 PAS fold 137 249 1.4E-6 T 01-11-2018 CDA09_07700 e398063eba9657f9c02c0438076f2595 562 SMART SM00091 131 202 1.7 T 01-11-2018 IPR000014 PAS domain CDA09_07700 e398063eba9657f9c02c0438076f2595 562 SMART SM00091 3 70 24.0 T 01-11-2018 IPR000014 PAS domain CDA09_07700 e398063eba9657f9c02c0438076f2595 562 SUPERFAMILY SSF55874 396 556 1.44E-43 T 01-11-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily CDA09_07700 e398063eba9657f9c02c0438076f2595 562 SUPERFAMILY SSF47384 289 404 2.75E-6 T 01-11-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 CDA09_07700 e398063eba9657f9c02c0438076f2595 562 Gene3D G3DSA:3.30.450.20 2 112 3.0E-11 T 01-11-2018 CDA09_07700 e398063eba9657f9c02c0438076f2595 562 SUPERFAMILY SSF55785 6 111 2.44E-10 T 01-11-2018 IPR035965 PAS domain superfamily CDA09_07700 e398063eba9657f9c02c0438076f2595 562 SMART SM00387 446 554 2.4E-30 T 01-11-2018 IPR003594 Histidine kinase/HSP90-like ATPase CDA09_07700 e398063eba9657f9c02c0438076f2595 562 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 7 116 6.2E-6 T 01-11-2018 IPR000014 PAS domain CDA09_07700 e398063eba9657f9c02c0438076f2595 562 PRINTS PR00344 Bacterial sensor protein C-terminal signature 538 551 4.3E-19 T 01-11-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 CDA09_07700 e398063eba9657f9c02c0438076f2595 562 PRINTS PR00344 Bacterial sensor protein C-terminal signature 501 511 4.3E-19 T 01-11-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 CDA09_07700 e398063eba9657f9c02c0438076f2595 562 PRINTS PR00344 Bacterial sensor protein C-terminal signature 483 497 4.3E-19 T 01-11-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 CDA09_07700 e398063eba9657f9c02c0438076f2595 562 PRINTS PR00344 Bacterial sensor protein C-terminal signature 514 532 4.3E-19 T 01-11-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 CDA09_07700 e398063eba9657f9c02c0438076f2595 562 Gene3D G3DSA:3.30.450.20 120 242 2.1E-13 T 01-11-2018 CDA09_07700 e398063eba9657f9c02c0438076f2595 562 Gene3D G3DSA:3.30.565.10 407 557 2.1E-44 T 01-11-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily CDA09_07700 e398063eba9657f9c02c0438076f2595 562 Gene3D G3DSA:1.10.287.130 281 401 3.1E-24 T 01-11-2018 CDA09_07700 e398063eba9657f9c02c0438076f2595 562 Pfam PF13188 PAS domain 6 62 0.0095 T 01-11-2018 IPR000014 PAS domain CDA09_07700 e398063eba9657f9c02c0438076f2595 562 SMART SM00388 305 406 0.0033 T 01-11-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 CDA09_17270 a4f0da865e1375e4f37fe3c49e2d99e9 263 Gene3D G3DSA:3.40.50.1000 85 186 8.4E-75 T 01-11-2018 IPR023214 HAD superfamily CDA09_17270 a4f0da865e1375e4f37fe3c49e2d99e9 263 Gene3D G3DSA:3.40.50.1000 14 254 8.4E-75 T 01-11-2018 IPR023214 HAD superfamily CDA09_17270 a4f0da865e1375e4f37fe3c49e2d99e9 263 TIGRFAM TIGR01458 HAD-SF-IIA-hyp3: HAD hydrolase, TIGR01458 family 14 260 1.1E-69 T 01-11-2018 IPR006355 HAD hydrolase, LHPP/HDHD2 CDA09_17270 a4f0da865e1375e4f37fe3c49e2d99e9 263 Pfam PF13344 Haloacid dehalogenase-like hydrolase 16 100 1.3E-17 T 01-11-2018 IPR006357 HAD-superfamily hydrolase, subfamily IIA CDA09_17270 a4f0da865e1375e4f37fe3c49e2d99e9 263 Pfam PF13242 HAD-hyrolase-like 182 255 6.0E-18 T 01-11-2018 CDA09_17270 a4f0da865e1375e4f37fe3c49e2d99e9 263 SUPERFAMILY SSF56784 13 255 1.99E-49 T 01-11-2018 IPR036412 HAD-like superfamily CDA09_17270 a4f0da865e1375e4f37fe3c49e2d99e9 263 TIGRFAM TIGR01460 HAD-SF-IIA: HAD hydrolase, family IIA 16 231 3.2E-30 T 01-11-2018 IPR006357 HAD-superfamily hydrolase, subfamily IIA CDA09_22255 8134dd51af2543954c23183fb03f74e9 293 Pfam PF02653 Branched-chain amino acid transport system / permease component 12 278 3.2E-27 T 01-11-2018 IPR001851 ABC transporter, permease GO:0016020|GO:0022857|GO:0055085 CDA09_18555 3e3ed274234eccff9873ae1a058d8e9c 324 Gene3D G3DSA:3.20.20.70 71 288 1.2E-17 T 01-11-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 CDA09_18555 3e3ed274234eccff9873ae1a058d8e9c 324 SUPERFAMILY SSF102114 49 308 2.88E-61 T 01-11-2018 CDA09_18555 3e3ed274234eccff9873ae1a058d8e9c 324 PIRSF PIRSF005963 12 323 1.5E-126 T 01-11-2018 IPR003698 Lipoyl synthase GO:0009107|GO:0016992|GO:0051539 KEGG: 00785+2.8.1.8|MetaCyc: PWY-6987|MetaCyc: PWY-7382|Reactome: R-HSA-389661 CDA09_18555 3e3ed274234eccff9873ae1a058d8e9c 324 Pfam PF04055 Radical SAM superfamily 84 245 6.0E-15 T 01-11-2018 IPR007197 Radical SAM GO:0003824|GO:0051536 CDA09_18555 3e3ed274234eccff9873ae1a058d8e9c 324 Hamap MF_00206 Lipoyl synthase [lipA]. 1 318 143.138 T 01-11-2018 IPR003698 Lipoyl synthase GO:0009107|GO:0016992|GO:0051539 KEGG: 00785+2.8.1.8|MetaCyc: PWY-6987|MetaCyc: PWY-7382|Reactome: R-HSA-389661 CDA09_18555 3e3ed274234eccff9873ae1a058d8e9c 324 TIGRFAM TIGR00510 lipA: lipoyl synthase 31 311 2.6E-121 T 01-11-2018 IPR003698 Lipoyl synthase GO:0009107|GO:0016992|GO:0051539 KEGG: 00785+2.8.1.8|MetaCyc: PWY-6987|MetaCyc: PWY-7382|Reactome: R-HSA-389661 CDA09_18555 3e3ed274234eccff9873ae1a058d8e9c 324 SMART SM00729 78 283 8.0E-13 T 01-11-2018 IPR006638 Elp3/MiaB/NifB GO:0003824|GO:0051536 CDA09_18200 10cba73fd6c495f52df297de672f7248 362 Pfam PF00953 Glycosyl transferase family 4 99 285 7.5E-34 T 01-11-2018 IPR000715 Glycosyl transferase, family 4 GO:0008963|GO:0016021 KEGG: 00550+2.7.8.13|MetaCyc: PWY-5265|MetaCyc: PWY-6470|MetaCyc: PWY-6471|Reactome: R-HSA-446193|Reactome: R-HSA-4549356 CDA09_18200 10cba73fd6c495f52df297de672f7248 362 Hamap MF_00038 Phospho-N-acetylmuramoyl-pentapeptide-transferase [mraY]. 25 360 23.92 T 01-11-2018 IPR003524 Phospho-N-acetylmuramoyl-pentapeptide transferase GO:0008963|GO:0016020 KEGG: 00550+2.7.8.13|MetaCyc: PWY-5265|MetaCyc: PWY-6470|MetaCyc: PWY-6471 CDA09_18200 10cba73fd6c495f52df297de672f7248 362 Pfam PF10555 Phospho-N-acetylmuramoyl-pentapeptide-transferase signature 1 68 80 3.3E-5 T 01-11-2018 IPR018480 Phospho-N-acetylmuramoyl-pentapeptide transferase, conserved site KEGG: 00550+2.7.8.13|MetaCyc: PWY-5265|MetaCyc: PWY-6470|MetaCyc: PWY-6471 CDA09_18200 10cba73fd6c495f52df297de672f7248 362 ProSitePatterns PS01347 MraY family signature 1. 68 80 - T 01-11-2018 IPR018480 Phospho-N-acetylmuramoyl-pentapeptide transferase, conserved site KEGG: 00550+2.7.8.13|MetaCyc: PWY-5265|MetaCyc: PWY-6470|MetaCyc: PWY-6471 CDA09_18200 10cba73fd6c495f52df297de672f7248 362 TIGRFAM TIGR00445 mraY: phospho-N-acetylmuramoyl-pentapeptide-transferase 38 362 1.2E-129 T 01-11-2018 IPR003524 Phospho-N-acetylmuramoyl-pentapeptide transferase GO:0008963|GO:0016020 KEGG: 00550+2.7.8.13|MetaCyc: PWY-5265|MetaCyc: PWY-6470|MetaCyc: PWY-6471 CDA09_18200 10cba73fd6c495f52df297de672f7248 362 ProSitePatterns PS01348 MraY family signature 2. 190 201 - T 01-11-2018 IPR018480 Phospho-N-acetylmuramoyl-pentapeptide transferase, conserved site KEGG: 00550+2.7.8.13|MetaCyc: PWY-5265|MetaCyc: PWY-6470|MetaCyc: PWY-6471 CDA09_00195 918176087d76b4a3583a62592d0050ae 1912 SUPERFAMILY SSF52540 1016 1484 1.92E-39 T 01-11-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CDA09_00195 918176087d76b4a3583a62592d0050ae 1912 Gene3D G3DSA:3.40.50.300 1004 1115 7.2E-24 T 01-11-2018 CDA09_00195 918176087d76b4a3583a62592d0050ae 1912 SUPERFAMILY SSF52540 1535 1854 7.23E-38 T 01-11-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CDA09_00195 918176087d76b4a3583a62592d0050ae 1912 Gene3D G3DSA:1.20.1580.10 731 868 4.0E-130 T 01-11-2018 CDA09_00195 918176087d76b4a3583a62592d0050ae 1912 Gene3D G3DSA:3.30.190.20 1137 1261 2.2E-26 T 01-11-2018 CDA09_00195 918176087d76b4a3583a62592d0050ae 1912 SMART SM00382 1547 1850 0.46 T 01-11-2018 IPR003593 AAA+ ATPase domain CDA09_00195 918176087d76b4a3583a62592d0050ae 1912 SMART SM00382 1034 1479 5.4 T 01-11-2018 IPR003593 AAA+ ATPase domain CDA09_00195 918176087d76b4a3583a62592d0050ae 1912 SMART SM00382 671 956 0.75 T 01-11-2018 IPR003593 AAA+ ATPase domain CDA09_00195 918176087d76b4a3583a62592d0050ae 1912 SUPERFAMILY SSF52540 4 616 5.26E-32 T 01-11-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CDA09_00195 918176087d76b4a3583a62592d0050ae 1912 ProSitePatterns PS00211 ABC transporters family signature. 1758 1772 - T 01-11-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 CDA09_00195 918176087d76b4a3583a62592d0050ae 1912 Gene3D G3DSA:3.40.50.300 1531 1880 1.3E-129 T 01-11-2018 CDA09_00195 918176087d76b4a3583a62592d0050ae 1912 Pfam PF00005 ABC transporter 662 888 2.6E-5 T 01-11-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 CDA09_00195 918176087d76b4a3583a62592d0050ae 1912 Gene3D G3DSA:3.40.50.300 653 985 4.0E-130 T 01-11-2018 CDA09_00195 918176087d76b4a3583a62592d0050ae 1912 Gene3D G3DSA:3.40.50.300 1272 1512 1.7E-58 T 01-11-2018 CDA09_00195 918176087d76b4a3583a62592d0050ae 1912 Gene3D G3DSA:1.20.1580.10 1620 1758 1.3E-129 T 01-11-2018 CDA09_00195 918176087d76b4a3583a62592d0050ae 1912 SUPERFAMILY SSF52540 653 960 5.79E-38 T 01-11-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CDA09_00195 918176087d76b4a3583a62592d0050ae 1912 ProSitePatterns PS00211 ABC transporters family signature. 1402 1416 - T 01-11-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 CDA09_18965 c708afb02518803e178923c42ae184b9 430 Gene3D G3DSA:2.40.420.20 54 328 2.1E-75 T 01-11-2018 CDA09_18965 c708afb02518803e178923c42ae184b9 430 Pfam PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion 58 304 3.1E-18 T 01-11-2018 IPR032317 RND efflux pump, membrane fusion protein, barrel-sandwich domain CDA09_18965 c708afb02518803e178923c42ae184b9 430 Gene3D G3DSA:2.40.30.170 59 311 2.1E-75 T 01-11-2018 CDA09_18965 c708afb02518803e178923c42ae184b9 430 Gene3D G3DSA:1.10.287.470 104 195 2.1E-75 T 01-11-2018 CDA09_18965 c708afb02518803e178923c42ae184b9 430 TIGRFAM TIGR01730 RND_mfp: efflux transporter, RND family, MFP subunit 49 329 8.5E-46 T 01-11-2018 IPR006143 RND efflux pump, membrane fusion protein GO:0005215|GO:0016020|GO:0055085 CDA09_18965 c708afb02518803e178923c42ae184b9 430 SUPERFAMILY SSF111369 61 303 1.19E-25 T 01-11-2018 CDA09_18965 c708afb02518803e178923c42ae184b9 430 Gene3D G3DSA:2.40.50.100 70 232 2.1E-75 T 01-11-2018 CDA09_18965 c708afb02518803e178923c42ae184b9 430 Gene3D G3DSA:2.20.25.620 362 411 2.0E-6 T 01-11-2018 CDA09_08005 980d6403fd22e283c49b2d6845092630 678 Gene3D G3DSA:1.10.8.60 522 600 2.2E-15 T 01-11-2018 CDA09_08005 980d6403fd22e283c49b2d6845092630 678 ProSitePatterns PS00675 Sigma-54 interaction domain ATP-binding region A signature. 373 386 - T 01-11-2018 IPR025662 Sigma-54 interaction domain, ATP-binding site 1 CDA09_08005 980d6403fd22e283c49b2d6845092630 678 SUPERFAMILY SSF55781 71 205 3.88E-6 T 01-11-2018 CDA09_08005 980d6403fd22e283c49b2d6845092630 678 ProSitePatterns PS00688 Sigma-54 interaction domain C-terminal part signature. 562 571 - T 01-11-2018 IPR025944 Sigma-54 interaction domain, conserved site CDA09_08005 980d6403fd22e283c49b2d6845092630 678 Gene3D G3DSA:3.30.450.40 26 212 6.1E-54 T 01-11-2018 IPR029016 GAF-like domain superfamily CDA09_08005 980d6403fd22e283c49b2d6845092630 678 Pfam PF02954 Bacterial regulatory protein, Fis family 636 676 2.0E-13 T 01-11-2018 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 CDA09_08005 980d6403fd22e283c49b2d6845092630 678 SUPERFAMILY SSF52540 357 587 1.04E-59 T 01-11-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CDA09_08005 980d6403fd22e283c49b2d6845092630 678 Gene3D G3DSA:1.10.10.60 622 677 6.6E-16 T 01-11-2018 CDA09_08005 980d6403fd22e283c49b2d6845092630 678 Pfam PF00158 Sigma-54 interaction domain 353 516 1.5E-62 T 01-11-2018 IPR002078 RNA polymerase sigma factor 54 interaction domain GO:0005524|GO:0006355|GO:0008134 CDA09_08005 980d6403fd22e283c49b2d6845092630 678 ProSitePatterns PS00676 Sigma-54 interaction domain ATP-binding region B signature. 436 451 - T 01-11-2018 IPR025943 Sigma-54 interaction domain, ATP-binding site 2 CDA09_08005 980d6403fd22e283c49b2d6845092630 678 SUPERFAMILY SSF46689 562 677 1.1E-14 T 01-11-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 CDA09_08005 980d6403fd22e283c49b2d6845092630 678 Gene3D G3DSA:3.40.50.300 337 521 4.3E-57 T 01-11-2018 CDA09_08005 980d6403fd22e283c49b2d6845092630 678 SMART SM00382 369 513 9.9E-8 T 01-11-2018 IPR003593 AAA+ ATPase domain CDA09_08005 980d6403fd22e283c49b2d6845092630 678 Pfam PF01590 GAF domain 82 207 3.6E-8 T 01-11-2018 IPR003018 GAF domain GO:0005515 CDA09_08005 980d6403fd22e283c49b2d6845092630 678 PRINTS PR01590 FIS bacterial regulatory protein HTH signature 660 678 7.6E-9 T 01-11-2018 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 CDA09_08005 980d6403fd22e283c49b2d6845092630 678 PRINTS PR01590 FIS bacterial regulatory protein HTH signature 643 660 7.6E-9 T 01-11-2018 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 CDA09_04470 98427c4a5c6db13ea9dd30d3e4e98070 384 Gene3D G3DSA:3.30.930.10 3 322 1.6E-66 T 01-11-2018 CDA09_04470 98427c4a5c6db13ea9dd30d3e4e98070 384 SUPERFAMILY SSF55681 5 316 2.38E-57 T 01-11-2018 CDA09_04470 98427c4a5c6db13ea9dd30d3e4e98070 384 Pfam PF13393 Histidyl-tRNA synthetase 8 312 1.7E-118 T 01-11-2018 CDA09_04470 98427c4a5c6db13ea9dd30d3e4e98070 384 Hamap MF_00125 ATP phosphoribosyltransferase regulatory subunit [hisZ]. 15 363 33.307 T 01-11-2018 IPR004517 ATP phosphoribosyltransferase regulatory subunit GO:0000105|GO:0005737 CDA09_04470 98427c4a5c6db13ea9dd30d3e4e98070 384 TIGRFAM TIGR00443 hisZ_biosyn_reg: ATP phosphoribosyltransferase, regulatory subunit 10 313 1.5E-84 T 01-11-2018 IPR004517 ATP phosphoribosyltransferase regulatory subunit GO:0000105|GO:0005737 CDA09_04470 98427c4a5c6db13ea9dd30d3e4e98070 384 PIRSF PIRSF001549 1 330 1.8E-36 T 01-11-2018 IPR004516 Histidine-tRNA ligase/ATP phosphoribosyltransferase regulatory subunit GO:0005737 CDA09_03750 3767e0be3a779a4bdfee90595e28e802 739 Gene3D G3DSA:3.40.50.300 8 277 2.1E-90 T 01-11-2018 CDA09_03750 3767e0be3a779a4bdfee90595e28e802 739 Pfam PF00580 UvrD/REP helicase N-terminal domain 8 276 5.2E-73 T 01-11-2018 IPR034739 UvrD/AddA helicase, N-terminal GO:0005524 CDA09_03750 3767e0be3a779a4bdfee90595e28e802 739 SUPERFAMILY SSF52540 1 643 3.01E-177 T 01-11-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CDA09_03750 3767e0be3a779a4bdfee90595e28e802 739 Gene3D G3DSA:3.40.50.300 285 636 3.1E-119 T 01-11-2018 CDA09_03750 3767e0be3a779a4bdfee90595e28e802 739 Gene3D G3DSA:1.10.10.160 116 188 2.1E-90 T 01-11-2018 IPR013986 DExx box DNA helicase domain superfamily CDA09_03750 3767e0be3a779a4bdfee90595e28e802 739 Pfam PF13361 UvrD-like helicase C-terminal domain 282 619 2.4E-73 T 01-11-2018 IPR014017 UvrD-like DNA helicase, C-terminal GO:0005524|GO:0016787 CDA09_03750 3767e0be3a779a4bdfee90595e28e802 739 Gene3D G3DSA:1.10.486.10 387 549 3.1E-119 T 01-11-2018 CDA09_14660 a7e340de3d55cc8c49f8a1a4e0ceaa7d 272 SUPERFAMILY SSF55811 90 259 4.74E-43 T 01-11-2018 IPR015797 NUDIX hydrolase-like domain superfamily GO:0016787 CDA09_14660 a7e340de3d55cc8c49f8a1a4e0ceaa7d 272 Gene3D G3DSA:3.90.79.20 14 140 1.4E-24 T 01-11-2018 CDA09_14660 a7e340de3d55cc8c49f8a1a4e0ceaa7d 272 Pfam PF09296 NADH pyrophosphatase-like rudimentary NUDIX domain 17 106 3.4E-11 T 01-11-2018 IPR015375 NADH pyrophosphatase-like, N-terminal GO:0016787 KEGG: 00760+3.6.1.22|MetaCyc: PWY-5381|MetaCyc: PWY-7761 CDA09_14660 a7e340de3d55cc8c49f8a1a4e0ceaa7d 272 Pfam PF09297 NADH pyrophosphatase zinc ribbon domain 109 139 6.3E-12 T 01-11-2018 IPR015376 Zinc ribbon, NADH pyrophosphatase GO:0016787|GO:0046872 KEGG: 00760+3.6.1.22|MetaCyc: PWY-5381|MetaCyc: PWY-7761 CDA09_14660 a7e340de3d55cc8c49f8a1a4e0ceaa7d 272 ProSitePatterns PS00893 Nudix box signature. 174 195 - T 01-11-2018 IPR020084 NUDIX hydrolase, conserved site GO:0016787 CDA09_14660 a7e340de3d55cc8c49f8a1a4e0ceaa7d 272 Pfam PF00293 NUDIX domain 143 251 3.8E-20 T 01-11-2018 IPR000086 NUDIX hydrolase domain GO:0016787 CDA09_14660 a7e340de3d55cc8c49f8a1a4e0ceaa7d 272 Hamap MF_00297 NADH pyrophosphatase [nudC]. 7 272 39.282 T 01-11-2018 IPR022925 NADH pyrophosphatase NudC GO:0000210 KEGG: 00760+3.6.1.22|MetaCyc: PWY-5381|MetaCyc: PWY-7761 CDA09_14660 a7e340de3d55cc8c49f8a1a4e0ceaa7d 272 Gene3D G3DSA:3.90.79.10 141 271 3.9E-41 T 01-11-2018 CDA09_14660 a7e340de3d55cc8c49f8a1a4e0ceaa7d 272 SUPERFAMILY SSF55811 18 111 1.77E-10 T 01-11-2018 IPR015797 NUDIX hydrolase-like domain superfamily GO:0016787 CDA09_20105 867375e10459b456752d6dc85de6054c 228 SUPERFAMILY SSF63965 9 216 6.15E-65 T 01-11-2018 IPR036588 Precorrin-8X methylmutase CobH/CbiC superfamily GO:0009236|GO:0016993 CDA09_20105 867375e10459b456752d6dc85de6054c 228 Pfam PF02570 Precorrin-8X methylmutase 17 213 4.5E-72 T 01-11-2018 IPR003722 Cobalamin biosynthesis precorrin-8X methylmutase CobH/CbiC GO:0009236|GO:0016993 CDA09_20105 867375e10459b456752d6dc85de6054c 228 Gene3D G3DSA:3.40.50.10230 5 227 3.6E-78 T 01-11-2018 IPR036588 Precorrin-8X methylmutase CobH/CbiC superfamily GO:0009236|GO:0016993 CDA09_20965 bc1f5146f246c0221f849b6f5557b120 260 TIGRFAM TIGR00195 exoDNase_III: exodeoxyribonuclease III 2 254 2.6E-71 T 01-11-2018 CDA09_20965 bc1f5146f246c0221f849b6f5557b120 260 SUPERFAMILY SSF56219 2 257 3.53E-76 T 01-11-2018 IPR036691 Endonuclease/exonuclease/phosphatase superfamily CDA09_20965 bc1f5146f246c0221f849b6f5557b120 260 TIGRFAM TIGR00633 xth: exodeoxyribonuclease III (xth) 2 256 7.5E-79 T 01-11-2018 IPR004808 AP endonuclease 1 GO:0004518|GO:0006281 CDA09_20965 bc1f5146f246c0221f849b6f5557b120 260 ProSitePatterns PS00726 AP endonucleases family 1 signature 1. 29 38 - T 01-11-2018 IPR020847 AP endonuclease 1, binding site GO:0003677|GO:0004519|GO:0005622|GO:0006281 CDA09_20965 bc1f5146f246c0221f849b6f5557b120 260 Gene3D G3DSA:3.60.10.10 1 258 3.2E-85 T 01-11-2018 IPR036691 Endonuclease/exonuclease/phosphatase superfamily CDA09_20965 bc1f5146f246c0221f849b6f5557b120 260 Pfam PF03372 Endonuclease/Exonuclease/phosphatase family 6 249 3.4E-21 T 01-11-2018 IPR005135 Endonuclease/exonuclease/phosphatase CDA09_05780 c35b0547989c528897e55e1c878e273d 278 SUPERFAMILY SSF161098 14 264 2.52E-56 T 01-11-2018 IPR035906 MetI-like superfamily CDA09_05780 c35b0547989c528897e55e1c878e273d 278 TIGRFAM TIGR02139 permease_CysT: sulfate ABC transporter, permease protein CysT 9 272 2.8E-129 T 01-11-2018 IPR011865 Sulphate ABC transporter, permease protein CysT GO:0008272|GO:0015116|GO:0016021 CDA09_05780 c35b0547989c528897e55e1c878e273d 278 TIGRFAM TIGR00969 3a0106s02: sulfate ABC transporter, permease protein 6 268 1.2E-99 T 01-11-2018 IPR005667 Sulphate ABC transporter permease protein 2 GO:0008272|GO:0015419|GO:0016020 CDA09_05780 c35b0547989c528897e55e1c878e273d 278 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 76 274 4.5E-28 T 01-11-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 CDA09_05780 c35b0547989c528897e55e1c878e273d 278 Gene3D G3DSA:1.10.3720.10 14 274 1.3E-69 T 01-11-2018 IPR035906 MetI-like superfamily CDA09_00525 13ead6034edaa51af8a17439fc1c217d 234 Gene3D G3DSA:1.10.10.10 128 227 2.5E-38 T 01-11-2018 IPR036388 Winged helix-like DNA-binding domain superfamily CDA09_00525 13ead6034edaa51af8a17439fc1c217d 234 SUPERFAMILY SSF52172 3 127 4.7E-46 T 01-11-2018 IPR011006 CheY-like superfamily CDA09_00525 13ead6034edaa51af8a17439fc1c217d 234 Pfam PF00486 Transcriptional regulatory protein, C terminal 151 225 1.3E-27 T 01-11-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 CDA09_00525 13ead6034edaa51af8a17439fc1c217d 234 SMART SM00862 150 225 5.1E-29 T 01-11-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 CDA09_00525 13ead6034edaa51af8a17439fc1c217d 234 SMART SM00448 3 116 5.9E-47 T 01-11-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 CDA09_00525 13ead6034edaa51af8a17439fc1c217d 234 TIGRFAM TIGR02154 PhoB: phosphate regulon transcriptional regulatory protein PhoB 1 226 8.5E-110 T 01-11-2018 IPR011879 Signal transduction response regulator, phosphate regulon transcriptional regulatory protein PhoB GO:0000156|GO:0000160|GO:0003677|GO:0006817 CDA09_00525 13ead6034edaa51af8a17439fc1c217d 234 SUPERFAMILY SSF46894 124 225 3.68E-31 T 01-11-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 CDA09_00525 13ead6034edaa51af8a17439fc1c217d 234 Pfam PF00072 Response regulator receiver domain 5 117 4.1E-29 T 01-11-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 CDA09_00525 13ead6034edaa51af8a17439fc1c217d 234 Gene3D G3DSA:3.40.50.2300 1 127 1.8E-42 T 01-11-2018 CDA09_10460 5c05e1c0bfc418fcb2a958da105d4292 352 Gene3D G3DSA:3.20.20.70 9 275 5.0E-82 T 01-11-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 CDA09_10460 5c05e1c0bfc418fcb2a958da105d4292 352 Hamap MF_01656 4-hydroxy-2-oxovalerate aldolase [mhpE]. 1 349 197.651 T 01-11-2018 IPR017629 4-hydroxy-2-oxovalerate aldolase GO:0008701|GO:0019439 KEGG: 00360+4.1.3.39|KEGG: 00362+4.1.3.39|KEGG: 00621+4.1.3.39|KEGG: 00622+4.1.3.39|MetaCyc: PWY-5162 CDA09_10460 5c05e1c0bfc418fcb2a958da105d4292 352 SUPERFAMILY SSF89000 295 344 1.1E-17 T 01-11-2018 CDA09_10460 5c05e1c0bfc418fcb2a958da105d4292 352 Pfam PF00682 HMGL-like 12 271 2.1E-62 T 01-11-2018 IPR000891 Pyruvate carboxyltransferase GO:0003824 CDA09_10460 5c05e1c0bfc418fcb2a958da105d4292 352 SUPERFAMILY SSF51569 11 281 1.25E-67 T 01-11-2018 CDA09_10460 5c05e1c0bfc418fcb2a958da105d4292 352 Pfam PF07836 DmpG-like communication domain 281 342 2.0E-30 T 01-11-2018 IPR012425 DmpG-like communication GO:0016833|GO:0019439 KEGG: 00360+4.1.3.39|KEGG: 00362+4.1.3.39|KEGG: 00621+4.1.3.39|KEGG: 00622+4.1.3.39|MetaCyc: PWY-5162 CDA09_10460 5c05e1c0bfc418fcb2a958da105d4292 352 Gene3D G3DSA:1.10.8.60 282 346 1.7E-29 T 01-11-2018 CDA09_10460 5c05e1c0bfc418fcb2a958da105d4292 352 ProDom PD005364 ALDOLASE 4-HYDROXY-2-OXOVALERATE LYASE PYRUVATE 4.1.3.- PLASMID HMG-COA LYASE-LIKE TRANSFERASE HOA 280 341 2.0E-27 T 01-11-2018 IPR012425 DmpG-like communication GO:0016833|GO:0019439 KEGG: 00360+4.1.3.39|KEGG: 00362+4.1.3.39|KEGG: 00621+4.1.3.39|KEGG: 00622+4.1.3.39|MetaCyc: PWY-5162 CDA09_10460 5c05e1c0bfc418fcb2a958da105d4292 352 TIGRFAM TIGR03217 4OH_2_O_val_ald: 4-hydroxy-2-oxovalerate aldolase 11 344 1.6E-166 T 01-11-2018 IPR017629 4-hydroxy-2-oxovalerate aldolase GO:0008701|GO:0019439 KEGG: 00360+4.1.3.39|KEGG: 00362+4.1.3.39|KEGG: 00621+4.1.3.39|KEGG: 00622+4.1.3.39|MetaCyc: PWY-5162 CDA09_02450 866f8867e400ec52184f1c02626d1030 348 TIGRFAM TIGR00635 ruvB: Holliday junction DNA helicase RuvB 32 335 1.2E-147 T 01-11-2018 IPR004605 DNA helicase, Holliday junction RuvB type GO:0003677|GO:0005524|GO:0006281|GO:0006310|GO:0009378 CDA09_02450 866f8867e400ec52184f1c02626d1030 348 SUPERFAMILY SSF52540 29 260 3.24E-54 T 01-11-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CDA09_02450 866f8867e400ec52184f1c02626d1030 348 Gene3D G3DSA:1.10.10.10 266 342 4.1E-31 T 01-11-2018 IPR036388 Winged helix-like DNA-binding domain superfamily CDA09_02450 866f8867e400ec52184f1c02626d1030 348 SMART SM00382 60 187 1.6E-9 T 01-11-2018 IPR003593 AAA+ ATPase domain CDA09_02450 866f8867e400ec52184f1c02626d1030 348 ProDom PD005323 DNA HELICASE HOLLIDAY JUNCTION RUVB NUCLEOTIDE-BINDING ATP-BINDING SOS RECOMBINATION RESPONSE 259 339 2.0E-38 T 01-11-2018 IPR008823 DNA helicase, Holliday junction RuvB type, C-terminal GO:0003677|GO:0006281|GO:0006310|GO:0009378 CDA09_02450 866f8867e400ec52184f1c02626d1030 348 Pfam PF05496 Holliday junction DNA helicase ruvB N-terminus 18 244 1.3E-119 T 01-11-2018 IPR008824 Holliday junction DNA helicase ruvB, N-terminal GO:0006281|GO:0006310|GO:0009378 CDA09_02450 866f8867e400ec52184f1c02626d1030 348 Hamap MF_00016 Holliday junction ATP-dependent DNA helicase RuvB [ruvB]. 1 348 184.453 T 01-11-2018 IPR004605 DNA helicase, Holliday junction RuvB type GO:0003677|GO:0005524|GO:0006281|GO:0006310|GO:0009378 CDA09_02450 866f8867e400ec52184f1c02626d1030 348 SUPERFAMILY SSF46785 265 339 4.84E-25 T 01-11-2018 IPR036390 Winged helix DNA-binding domain superfamily CDA09_02450 866f8867e400ec52184f1c02626d1030 348 Pfam PF05491 Holliday junction DNA helicase ruvB C-terminus 262 335 7.5E-32 T 01-11-2018 IPR008823 DNA helicase, Holliday junction RuvB type, C-terminal GO:0003677|GO:0006281|GO:0006310|GO:0009378 CDA09_02450 866f8867e400ec52184f1c02626d1030 348 Gene3D G3DSA:3.40.50.300 29 190 1.1E-39 T 01-11-2018 CDA09_02450 866f8867e400ec52184f1c02626d1030 348 Gene3D G3DSA:1.10.8.60 191 265 3.3E-32 T 01-11-2018 CDA09_21900 7ce159b5874df0937b668e959eb37258 286 Pfam PF08406 CbbQ/NirQ/NorQ C-terminal 191 253 5.1E-8 T 01-11-2018 IPR013615 CbbQ/NirQ/NorQ, C-terminal CDA09_21900 7ce159b5874df0937b668e959eb37258 286 Gene3D G3DSA:3.40.50.300 26 196 8.0E-21 T 01-11-2018 CDA09_21900 7ce159b5874df0937b668e959eb37258 286 SUPERFAMILY SSF52540 31 237 3.75E-27 T 01-11-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CDA09_21900 7ce159b5874df0937b668e959eb37258 286 Pfam PF07728 AAA domain (dynein-related subfamily) 42 178 2.2E-18 T 01-11-2018 IPR011704 ATPase, dynein-related, AAA domain GO:0005524|GO:0016887 CDA09_07525 7ce159b5874df0937b668e959eb37258 286 Pfam PF08406 CbbQ/NirQ/NorQ C-terminal 191 253 5.1E-8 T 01-11-2018 IPR013615 CbbQ/NirQ/NorQ, C-terminal CDA09_07525 7ce159b5874df0937b668e959eb37258 286 Gene3D G3DSA:3.40.50.300 26 196 8.0E-21 T 01-11-2018 CDA09_07525 7ce159b5874df0937b668e959eb37258 286 SUPERFAMILY SSF52540 31 237 3.75E-27 T 01-11-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CDA09_07525 7ce159b5874df0937b668e959eb37258 286 Pfam PF07728 AAA domain (dynein-related subfamily) 42 178 2.2E-18 T 01-11-2018 IPR011704 ATPase, dynein-related, AAA domain GO:0005524|GO:0016887 CDA09_05180 5870baa7aa3b74b17908e88140b000a0 240 Gene3D G3DSA:2.40.240.20 1 67 4.5E-16 T 01-11-2018 CDA09_05180 5870baa7aa3b74b17908e88140b000a0 240 PIRSF PIRSF015601 1 239 4.0E-54 T 01-11-2018 IPR006700 Ribosomal RNA small subunit methyltransferase E GO:0006364|GO:0008168 CDA09_05180 5870baa7aa3b74b17908e88140b000a0 240 SUPERFAMILY SSF88697 2 60 4.64E-12 T 01-11-2018 IPR015947 PUA-like superfamily CDA09_05180 5870baa7aa3b74b17908e88140b000a0 240 Gene3D G3DSA:3.40.1280.10 72 240 5.1E-62 T 01-11-2018 IPR029026 tRNA (guanine-N1-)-methyltransferase, N-terminal CDA09_05180 5870baa7aa3b74b17908e88140b000a0 240 Pfam PF04452 RNA methyltransferase 18 235 4.8E-67 T 01-11-2018 IPR006700 Ribosomal RNA small subunit methyltransferase E GO:0006364|GO:0008168 CDA09_05180 5870baa7aa3b74b17908e88140b000a0 240 TIGRFAM TIGR00046 TIGR00046: RNA methyltransferase, RsmE family 11 239 2.6E-53 T 01-11-2018 IPR006700 Ribosomal RNA small subunit methyltransferase E GO:0006364|GO:0008168 CDA09_05180 5870baa7aa3b74b17908e88140b000a0 240 SUPERFAMILY SSF75217 73 240 4.13E-53 T 01-11-2018 IPR029028 Alpha/beta knot methyltransferases CDA09_00975 b63ef6a069d71ce69527fe6edf2cf2cd 712 Gene3D G3DSA:3.40.50.300 154 413 1.8E-67 T 01-11-2018 CDA09_00975 b63ef6a069d71ce69527fe6edf2cf2cd 712 SUPERFAMILY SSF52540 32 418 1.47E-45 T 01-11-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CDA09_00975 b63ef6a069d71ce69527fe6edf2cf2cd 712 SUPERFAMILY SSF52540 338 691 3.72E-50 T 01-11-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CDA09_00975 b63ef6a069d71ce69527fe6edf2cf2cd 712 Pfam PF13604 AAA domain 201 374 1.8E-28 T 01-11-2018 CDA09_00975 b63ef6a069d71ce69527fe6edf2cf2cd 712 Hamap MF_01487 RecBCD enzyme subunit RecD [recD]. 43 707 49.103 T 01-11-2018 IPR006344 RecBCD enzyme subunit RecD GO:0004386|GO:0006302|GO:0006310|GO:0008854|GO:0009338 CDA09_00975 b63ef6a069d71ce69527fe6edf2cf2cd 712 Gene3D G3DSA:3.40.50.300 567 698 1.5E-23 T 01-11-2018 CDA09_00975 b63ef6a069d71ce69527fe6edf2cf2cd 712 Gene3D G3DSA:3.40.50.300 423 566 3.2E-20 T 01-11-2018 CDA09_00975 b63ef6a069d71ce69527fe6edf2cf2cd 712 Pfam PF13538 UvrD-like helicase C-terminal domain 636 682 1.3E-15 T 01-11-2018 IPR027785 UvrD-like helicase C-terminal domain CDA09_00975 b63ef6a069d71ce69527fe6edf2cf2cd 712 Gene3D G3DSA:1.10.10.1020 29 153 1.7E-24 T 01-11-2018 CDA09_00975 b63ef6a069d71ce69527fe6edf2cf2cd 712 TIGRFAM TIGR01447 recD: exodeoxyribonuclease V, alpha subunit 34 706 9.6E-174 T 01-11-2018 IPR006344 RecBCD enzyme subunit RecD GO:0004386|GO:0006302|GO:0006310|GO:0008854|GO:0009338 CDA09_05560 f2bc4af50b71b9bb61a6531983689599 116 TIGRFAM TIGR00049 TIGR00049: iron-sulfur cluster assembly accessory protein 13 115 5.2E-40 T 01-11-2018 IPR016092 FeS cluster insertion protein GO:0005198|GO:0051536|GO:0097428 Reactome: R-HSA-1362409 CDA09_05560 f2bc4af50b71b9bb61a6531983689599 116 Gene3D G3DSA:2.60.300.12 11 116 1.4E-35 T 01-11-2018 IPR035903 HesB-like domain superfamily Reactome: R-HSA-1362409 CDA09_05560 f2bc4af50b71b9bb61a6531983689599 116 SUPERFAMILY SSF89360 11 105 2.55E-33 T 01-11-2018 IPR035903 HesB-like domain superfamily Reactome: R-HSA-1362409 CDA09_05560 f2bc4af50b71b9bb61a6531983689599 116 Hamap MF_01380 Iron-sulfur cluster insertion protein ErpA [erpA]. 1 116 37.583 T 01-11-2018 IPR023063 FeS cluster insertion protein ErpA GO:0097428 CDA09_05560 f2bc4af50b71b9bb61a6531983689599 116 ProSitePatterns PS01152 Hypothetical hesB/yadR/yfhF family signature. 97 114 - T 01-11-2018 IPR017870 FeS cluster insertion, C-terminal, conserved site Reactome: R-HSA-1362409 CDA09_05560 f2bc4af50b71b9bb61a6531983689599 116 Pfam PF01521 Iron-sulphur cluster biosynthesis 12 111 6.8E-21 T 01-11-2018 IPR000361 FeS cluster biogenesis Reactome: R-HSA-1362409 CDA09_07175 ba349bdbf2f5899ae7802d66f9c654fd 359 TIGRFAM TIGR00034 aroFGH: 3-deoxy-7-phosphoheptulonate synthase 7 349 8.5E-140 T 01-11-2018 IPR006219 DHAP synthase, class 1 GO:0003849|GO:0009073 KEGG: 00400+2.5.1.54|MetaCyc: PWY-6164 CDA09_07175 ba349bdbf2f5899ae7802d66f9c654fd 359 SUPERFAMILY SSF51569 8 348 4.08E-127 T 01-11-2018 CDA09_07175 ba349bdbf2f5899ae7802d66f9c654fd 359 Pfam PF00793 DAHP synthetase I family 45 339 2.8E-85 T 01-11-2018 IPR006218 DAHP synthetase I/KDSA GO:0009058 KEGG: 00540+2.5.1.55|MetaCyc: PWY-1269|MetaCyc: PWY-7674 CDA09_07175 ba349bdbf2f5899ae7802d66f9c654fd 359 Gene3D G3DSA:3.20.20.70 3 354 2.2E-143 T 01-11-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 CDA09_07175 ba349bdbf2f5899ae7802d66f9c654fd 359 PIRSF PIRSF001361 2 355 4.7E-153 T 01-11-2018 IPR006219 DHAP synthase, class 1 GO:0003849|GO:0009073 KEGG: 00400+2.5.1.54|MetaCyc: PWY-6164 CDA09_14555 0b2961a23ae599194fdbef4c39f9f023 519 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 152 268 1.1E-12 T 01-11-2018 IPR000014 PAS domain CDA09_14555 0b2961a23ae599194fdbef4c39f9f023 519 SUPERFAMILY SSF55874 359 490 2.75E-20 T 01-11-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily CDA09_14555 0b2961a23ae599194fdbef4c39f9f023 519 Gene3D G3DSA:3.30.450.20 144 293 9.3E-20 T 01-11-2018 CDA09_14555 0b2961a23ae599194fdbef4c39f9f023 519 SUPERFAMILY SSF55785 6 134 1.41E-13 T 01-11-2018 IPR035965 PAS domain superfamily CDA09_14555 0b2961a23ae599194fdbef4c39f9f023 519 Gene3D G3DSA:3.30.565.10 367 491 1.2E-28 T 01-11-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily CDA09_14555 0b2961a23ae599194fdbef4c39f9f023 519 SUPERFAMILY SSF55785 133 252 1.5E-22 T 01-11-2018 IPR035965 PAS domain superfamily CDA09_14555 0b2961a23ae599194fdbef4c39f9f023 519 Gene3D G3DSA:3.30.450.20 16 89 7.2E-10 T 01-11-2018 CDA09_14555 0b2961a23ae599194fdbef4c39f9f023 519 Pfam PF13426 PAS domain 159 261 2.1E-7 T 01-11-2018 IPR000014 PAS domain CDA09_14555 0b2961a23ae599194fdbef4c39f9f023 519 Pfam PF07730 Histidine kinase 291 359 2.6E-7 T 01-11-2018 IPR011712 Signal transduction histidine kinase, subgroup 3, dimerisation and phosphoacceptor domain GO:0000155|GO:0000160|GO:0016021|GO:0046983 CDA09_14555 0b2961a23ae599194fdbef4c39f9f023 519 SMART SM00086 221 263 0.051 T 01-11-2018 IPR001610 PAC motif CDA09_14555 0b2961a23ae599194fdbef4c39f9f023 519 SMART SM00086 94 136 0.071 T 01-11-2018 IPR001610 PAC motif CDA09_14555 0b2961a23ae599194fdbef4c39f9f023 519 SMART SM00091 148 215 5.2E-4 T 01-11-2018 IPR000014 PAS domain CDA09_14555 0b2961a23ae599194fdbef4c39f9f023 519 SMART SM00091 20 84 230.0 T 01-11-2018 IPR000014 PAS domain CDA09_14555 0b2961a23ae599194fdbef4c39f9f023 519 Gene3D G3DSA:2.10.70.100 92 137 1.8E-8 T 01-11-2018 CDA09_14555 0b2961a23ae599194fdbef4c39f9f023 519 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 400 491 5.3E-9 T 01-11-2018 IPR003594 Histidine kinase/HSP90-like ATPase CDA09_14555 0b2961a23ae599194fdbef4c39f9f023 519 SMART SM00387 397 494 9.1E-9 T 01-11-2018 IPR003594 Histidine kinase/HSP90-like ATPase CDA09_14555 0b2961a23ae599194fdbef4c39f9f023 519 Pfam PF08448 PAS fold 78 137 3.0E-6 T 01-11-2018 IPR013656 PAS fold-4 CDA09_22305 dcdf836508d57aded8993d0491a14fb2 688 Gene3D G3DSA:3.20.20.450 424 682 2.3E-99 T 01-11-2018 IPR035919 EAL domain superfamily CDA09_22305 dcdf836508d57aded8993d0491a14fb2 688 SUPERFAMILY SSF55073 254 411 1.8E-50 T 01-11-2018 IPR029787 Nucleotide cyclase CDA09_22305 dcdf836508d57aded8993d0491a14fb2 688 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 246 408 1.4E-41 T 01-11-2018 IPR000160 GGDEF domain CDA09_22305 dcdf836508d57aded8993d0491a14fb2 688 Pfam PF00672 HAMP domain 193 240 2.1E-10 T 01-11-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 CDA09_22305 dcdf836508d57aded8993d0491a14fb2 688 SUPERFAMILY SSF141868 425 673 3.14E-87 T 01-11-2018 IPR035919 EAL domain superfamily CDA09_22305 dcdf836508d57aded8993d0491a14fb2 688 SMART SM00052 420 665 3.0E-115 T 01-11-2018 IPR001633 EAL domain CDA09_22305 dcdf836508d57aded8993d0491a14fb2 688 SUPERFAMILY SSF158472 193 239 6.28E-6 T 01-11-2018 CDA09_22305 dcdf836508d57aded8993d0491a14fb2 688 Pfam PF00990 Diguanylate cyclase, GGDEF domain 249 404 6.5E-48 T 01-11-2018 IPR000160 GGDEF domain CDA09_22305 dcdf836508d57aded8993d0491a14fb2 688 Gene3D G3DSA:1.20.1480.50 155 245 1.4E-7 T 01-11-2018 CDA09_22305 dcdf836508d57aded8993d0491a14fb2 688 SMART SM00267 238 410 8.2E-59 T 01-11-2018 IPR000160 GGDEF domain CDA09_22305 dcdf836508d57aded8993d0491a14fb2 688 Gene3D G3DSA:3.30.70.270 246 423 1.7E-60 T 01-11-2018 CDA09_22305 dcdf836508d57aded8993d0491a14fb2 688 SMART SM00304 192 243 1.5E-7 T 01-11-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 CDA09_22305 dcdf836508d57aded8993d0491a14fb2 688 Pfam PF00563 EAL domain 426 660 3.9E-73 T 01-11-2018 IPR001633 EAL domain CDA09_15215 1430c8f8b5dec1e0b3a5ad3a1fc20627 225 Pfam PF14622 Ribonuclease-III-like 18 138 2.9E-35 T 01-11-2018 IPR000999 Ribonuclease III domain GO:0004525|GO:0006396 Reactome: R-HSA-203927 CDA09_15215 1430c8f8b5dec1e0b3a5ad3a1fc20627 225 ProSitePatterns PS00517 Ribonuclease III family signature. 37 45 - T 01-11-2018 IPR000999 Ribonuclease III domain GO:0004525|GO:0006396 Reactome: R-HSA-203927 CDA09_15215 1430c8f8b5dec1e0b3a5ad3a1fc20627 225 TIGRFAM TIGR02191 RNaseIII: ribonuclease III 9 222 9.9E-69 T 01-11-2018 IPR011907 Ribonuclease III GO:0003723|GO:0004525|GO:0016075 Reactome: R-HSA-203927 CDA09_15215 1430c8f8b5dec1e0b3a5ad3a1fc20627 225 SUPERFAMILY SSF69065 4 157 1.18E-46 T 01-11-2018 IPR036389 Ribonuclease III, endonuclease domain superfamily GO:0004525|GO:0006396 CDA09_15215 1430c8f8b5dec1e0b3a5ad3a1fc20627 225 SMART SM00535 20 148 2.1E-52 T 01-11-2018 IPR000999 Ribonuclease III domain GO:0004525|GO:0006396 Reactome: R-HSA-203927 CDA09_15215 1430c8f8b5dec1e0b3a5ad3a1fc20627 225 SMART SM00358 155 223 1.4E-20 T 01-11-2018 IPR014720 Double-stranded RNA-binding domain CDA09_15215 1430c8f8b5dec1e0b3a5ad3a1fc20627 225 Gene3D G3DSA:3.30.160.20 153 224 4.1E-19 T 01-11-2018 CDA09_15215 1430c8f8b5dec1e0b3a5ad3a1fc20627 225 Hamap MF_00104 Ribonuclease 3 [rnc]. 8 219 28.798 T 01-11-2018 IPR011907 Ribonuclease III GO:0003723|GO:0004525|GO:0016075 Reactome: R-HSA-203927 CDA09_15215 1430c8f8b5dec1e0b3a5ad3a1fc20627 225 Gene3D G3DSA:1.10.1520.10 1 146 1.9E-43 T 01-11-2018 IPR036389 Ribonuclease III, endonuclease domain superfamily GO:0004525|GO:0006396 CDA09_15215 1430c8f8b5dec1e0b3a5ad3a1fc20627 225 Pfam PF00035 Double-stranded RNA binding motif 155 222 1.4E-13 T 01-11-2018 IPR014720 Double-stranded RNA-binding domain CDA09_15215 1430c8f8b5dec1e0b3a5ad3a1fc20627 225 SUPERFAMILY SSF54768 108 222 5.97E-26 T 01-11-2018 CDA09_04975 9815dc945646b6d7eba614f3c1f78a85 265 Gene3D G3DSA:3.40.50.10090 11 242 6.7E-77 T 01-11-2018 CDA09_04975 9815dc945646b6d7eba614f3c1f78a85 265 Gene3D G3DSA:3.40.50.10090 40 174 6.7E-77 T 01-11-2018 CDA09_04975 9815dc945646b6d7eba614f3c1f78a85 265 Pfam PF02602 Uroporphyrinogen-III synthase HemD 22 237 2.8E-42 T 01-11-2018 IPR003754 Tetrapyrrole biosynthesis, uroporphyrinogen III synthase GO:0004852|GO:0033014 KEGG: 00860+4.2.1.75|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451 CDA09_04975 9815dc945646b6d7eba614f3c1f78a85 265 SUPERFAMILY SSF69618 8 255 2.88E-55 T 01-11-2018 IPR036108 Tetrapyrrole biosynthesis, uroporphyrinogen III synthase superfamily GO:0004852|GO:0033014 KEGG: 00860+4.2.1.75|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451 CDA09_10260 6c806688bc0036bbe9ab271fc097c6b7 89 Pfam PF02406 MmoB/DmpM family 3 85 2.3E-32 T 01-11-2018 IPR003454 Monooxygenase component MmoB/DmpM GO:0004497|GO:0006725 CDA09_10260 6c806688bc0036bbe9ab271fc097c6b7 89 Gene3D G3DSA:3.90.56.10 1 88 3.1E-35 T 01-11-2018 IPR036889 Monooxygenase component MmoB/DmpM superfamily GO:0004497|GO:0006725 CDA09_10260 6c806688bc0036bbe9ab271fc097c6b7 89 ProDom PD004249 MONOOXYGENASE COMPONENT HYDROXYLASE MMOB/DMPM PHENOL SUBUNIT 3D-STRUCTURE HYDROCARBONS IRON PHENOLHYDROXYLASE 9 83 4.0E-27 T 01-11-2018 IPR003454 Monooxygenase component MmoB/DmpM GO:0004497|GO:0006725 CDA09_10260 6c806688bc0036bbe9ab271fc097c6b7 89 SUPERFAMILY SSF56029 3 88 3.92E-32 T 01-11-2018 IPR036889 Monooxygenase component MmoB/DmpM superfamily GO:0004497|GO:0006725 CDA09_07130 1f20f4aa2455f82f781e98c6bd187980 265 Gene3D G3DSA:3.40.1280.10 112 264 3.0E-46 T 01-11-2018 IPR029026 tRNA (guanine-N1-)-methyltransferase, N-terminal CDA09_07130 1f20f4aa2455f82f781e98c6bd187980 265 Gene3D G3DSA:3.30.1330.30 3 105 1.8E-18 T 01-11-2018 IPR029064 50S ribosomal protein L30e-like CDA09_07130 1f20f4aa2455f82f781e98c6bd187980 265 SMART SM00967 33 107 1.9E-6 T 01-11-2018 IPR013123 RNA 2-O ribose methyltransferase, substrate binding GO:0008168 Reactome: R-HSA-6793080 CDA09_07130 1f20f4aa2455f82f781e98c6bd187980 265 Pfam PF00588 SpoU rRNA Methylase family 116 253 9.2E-35 T 01-11-2018 IPR001537 tRNA/rRNA methyltransferase, SpoU type GO:0003723|GO:0006396|GO:0008173 CDA09_07130 1f20f4aa2455f82f781e98c6bd187980 265 SUPERFAMILY SSF55315 4 104 3.53E-19 T 01-11-2018 IPR029064 50S ribosomal protein L30e-like CDA09_07130 1f20f4aa2455f82f781e98c6bd187980 265 SUPERFAMILY SSF75217 111 260 4.32E-42 T 01-11-2018 IPR029028 Alpha/beta knot methyltransferases CDA09_03690 6e8c35af850768013eefd0384b303bc9 342 TIGRFAM TIGR00329 gcp_kae1: metallohydrolase, glycoprotease/Kae1 family 4 306 1.8E-111 T 01-11-2018 IPR017861 Kae1/TsaD family CDA09_03690 6e8c35af850768013eefd0384b303bc9 342 Pfam PF00814 Glycoprotease family 24 307 8.4E-99 T 01-11-2018 IPR000905 Gcp-like domain CDA09_03690 6e8c35af850768013eefd0384b303bc9 342 SUPERFAMILY SSF53067 3 121 4.01E-29 T 01-11-2018 CDA09_03690 6e8c35af850768013eefd0384b303bc9 342 Gene3D G3DSA:3.30.420.40 129 293 6.7E-126 T 01-11-2018 CDA09_03690 6e8c35af850768013eefd0384b303bc9 342 Hamap MF_01445 tRNA N6-adenosine threonylcarbamoyltransferase [tsaD]. 1 333 64.497 T 01-11-2018 IPR022450 tRNA N6-adenosine threonylcarbamoyltransferase, TsaD GO:0002949|GO:0004222 CDA09_03690 6e8c35af850768013eefd0384b303bc9 342 TIGRFAM TIGR03723 T6A_TsaD_YgjD: tRNA threonylcarbamoyl adenosine modification protein TsaD 3 313 7.7E-132 T 01-11-2018 IPR022450 tRNA N6-adenosine threonylcarbamoyltransferase, TsaD GO:0002949|GO:0004222 CDA09_03690 6e8c35af850768013eefd0384b303bc9 342 Gene3D G3DSA:3.30.420.40 3 315 6.7E-126 T 01-11-2018 CDA09_03690 6e8c35af850768013eefd0384b303bc9 342 SUPERFAMILY SSF53067 101 309 1.44E-43 T 01-11-2018 CDA09_03690 6e8c35af850768013eefd0384b303bc9 342 PRINTS PR00789 O-sialoglycoprotein endopeptidase (M22) metallo-protease family signature 154 175 2.7E-50 T 01-11-2018 IPR017861 Kae1/TsaD family CDA09_03690 6e8c35af850768013eefd0384b303bc9 342 PRINTS PR00789 O-sialoglycoprotein endopeptidase (M22) metallo-protease family signature 4 17 2.7E-50 T 01-11-2018 IPR017861 Kae1/TsaD family CDA09_03690 6e8c35af850768013eefd0384b303bc9 342 PRINTS PR00789 O-sialoglycoprotein endopeptidase (M22) metallo-protease family signature 97 116 2.7E-50 T 01-11-2018 IPR017861 Kae1/TsaD family CDA09_03690 6e8c35af850768013eefd0384b303bc9 342 PRINTS PR00789 O-sialoglycoprotein endopeptidase (M22) metallo-protease family signature 131 143 2.7E-50 T 01-11-2018 IPR017861 Kae1/TsaD family CDA09_03690 6e8c35af850768013eefd0384b303bc9 342 PRINTS PR00789 O-sialoglycoprotein endopeptidase (M22) metallo-protease family signature 76 96 2.7E-50 T 01-11-2018 IPR017861 Kae1/TsaD family CDA09_03690 6e8c35af850768013eefd0384b303bc9 342 PRINTS PR00789 O-sialoglycoprotein endopeptidase (M22) metallo-protease family signature 263 272 2.7E-50 T 01-11-2018 IPR017861 Kae1/TsaD family CDA09_09955 2720f512dcb297b4bda3fc9067dc5b15 263 SUPERFAMILY SSF56529 1 261 7.06E-75 T 01-11-2018 IPR036663 Fumarylacetoacetase-like, C-terminal domain superfamily GO:0003824 CDA09_09955 2720f512dcb297b4bda3fc9067dc5b15 263 Pfam PF01557 Fumarylacetoacetate (FAA) hydrolase family 82 257 1.8E-11 T 01-11-2018 IPR011234 Fumarylacetoacetase-like, C-terminal GO:0003824 CDA09_09955 2720f512dcb297b4bda3fc9067dc5b15 263 Gene3D G3DSA:3.90.850.10 1 261 1.4E-82 T 01-11-2018 IPR036663 Fumarylacetoacetase-like, C-terminal domain superfamily GO:0003824 CDA09_07070 d43b48b21a7afdc611416d4d9283720e 269 ProSitePatterns PS01066 Undecaprenyl pyrophosphate synthase family signature. 189 206 - T 01-11-2018 IPR018520 Di-trans-poly-cis-decaprenylcistransferase-like, conserved site GO:0016765 Reactome: R-HSA-446199|Reactome: R-HSA-4755609 CDA09_07070 d43b48b21a7afdc611416d4d9283720e 269 TIGRFAM TIGR00055 uppS: di-trans,poly-cis-decaprenylcistransferase 19 243 7.9E-88 T 01-11-2018 IPR001441 Decaprenyl diphosphate synthase-like GO:0016765 Reactome: R-HSA-446199 CDA09_07070 d43b48b21a7afdc611416d4d9283720e 269 Gene3D G3DSA:3.40.1180.10 8 246 4.3E-91 T 01-11-2018 IPR036424 Decaprenyl diphosphate synthase-like superfamily GO:0016765 Reactome: R-HSA-446199 CDA09_07070 d43b48b21a7afdc611416d4d9283720e 269 SUPERFAMILY SSF64005 18 239 6.93E-86 T 01-11-2018 IPR036424 Decaprenyl diphosphate synthase-like superfamily GO:0016765 Reactome: R-HSA-446199 CDA09_07070 d43b48b21a7afdc611416d4d9283720e 269 Hamap MF_01139 Ditrans,polycis-undecaprenyl-diphosphate synthase ((2E,6E)-farnesyl-diphosphate specific) [uppS]. 19 244 40.076 T 01-11-2018 IPR001441 Decaprenyl diphosphate synthase-like GO:0016765 Reactome: R-HSA-446199 CDA09_07070 d43b48b21a7afdc611416d4d9283720e 269 Pfam PF01255 Putative undecaprenyl diphosphate synthase 26 243 6.6E-80 T 01-11-2018 IPR001441 Decaprenyl diphosphate synthase-like GO:0016765 Reactome: R-HSA-446199 CDA09_21045 db00ab4676370f53d0d964830878a9b1 221 Pfam PF09704 CRISPR-associated protein (Cas_Cas5) 4 209 1.4E-35 T 01-11-2018 IPR021124 CRISPR-associated protein, Cas5 GO:0043571 CDA09_21045 db00ab4676370f53d0d964830878a9b1 221 Gene3D G3DSA:3.30.70.2660 1 219 3.9E-58 T 01-11-2018 CDA09_21045 db00ab4676370f53d0d964830878a9b1 221 TIGRFAM TIGR01868 casD_Cas5e: CRISPR-associated protein Cas5/CasD, subtype I-E/ECOLI 4 210 9.2E-53 T 01-11-2018 IPR010147 CRISPR-associated protein, CasD GO:0003723|GO:0051607 CDA09_21045 db00ab4676370f53d0d964830878a9b1 221 TIGRFAM TIGR02593 CRISPR_cas5: CRISPR-associated protein Cas5 5 46 1.6E-11 T 01-11-2018 IPR013422 CRISPR-associated protein Cas5, N-terminal CDA09_04720 9b2f8d9769c4af2e981650e5e7f58898 260 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 164 183 1.3E-10 T 01-11-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CDA09_04720 9b2f8d9769c4af2e981650e5e7f58898 260 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 90 101 1.3E-10 T 01-11-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CDA09_04720 9b2f8d9769c4af2e981650e5e7f58898 260 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 144 152 1.3E-10 T 01-11-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CDA09_04720 9b2f8d9769c4af2e981650e5e7f58898 260 Gene3D G3DSA:3.40.50.720 7 257 1.1E-73 T 01-11-2018 CDA09_04720 9b2f8d9769c4af2e981650e5e7f58898 260 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 21 252 3.2E-52 T 01-11-2018 CDA09_04720 9b2f8d9769c4af2e981650e5e7f58898 260 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 138 154 6.1E-34 T 01-11-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CDA09_04720 9b2f8d9769c4af2e981650e5e7f58898 260 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 16 33 6.1E-34 T 01-11-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CDA09_04720 9b2f8d9769c4af2e981650e5e7f58898 260 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 164 183 6.1E-34 T 01-11-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CDA09_04720 9b2f8d9769c4af2e981650e5e7f58898 260 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 90 101 6.1E-34 T 01-11-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CDA09_04720 9b2f8d9769c4af2e981650e5e7f58898 260 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 185 202 6.1E-34 T 01-11-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CDA09_04720 9b2f8d9769c4af2e981650e5e7f58898 260 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 219 239 6.1E-34 T 01-11-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CDA09_04720 9b2f8d9769c4af2e981650e5e7f58898 260 SUPERFAMILY SSF51735 10 253 2.94E-71 T 01-11-2018 IPR036291 NAD(P)-binding domain superfamily CDA09_04720 9b2f8d9769c4af2e981650e5e7f58898 260 SMART SM00822 This enzymatic domain is part of bacterial polyketide synthases and catalyses the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain. It uses NADPH to reduce the keto group to a hydroxy group. 15 155 0.0068 T 01-11-2018 CDA09_00670 416ee2c3abdc01c26cd81d24b52b198c 155 Gene3D G3DSA:1.10.760.10 65 143 1.9E-30 T 01-11-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 CDA09_00670 416ee2c3abdc01c26cd81d24b52b198c 155 Pfam PF13442 Cytochrome C oxidase, cbb3-type, subunit III 67 140 9.0E-17 T 01-11-2018 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 Reactome: R-HSA-111457|Reactome: R-HSA-111458|Reactome: R-HSA-111459|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 CDA09_00670 416ee2c3abdc01c26cd81d24b52b198c 155 PRINTS PR00607 Class IE cytochrome C signature 130 141 7.6E-13 T 01-11-2018 IPR002323 Cytochrome c, class IE GO:0005506|GO:0009055|GO:0020037 CDA09_00670 416ee2c3abdc01c26cd81d24b52b198c 155 PRINTS PR00607 Class IE cytochrome C signature 115 127 7.6E-13 T 01-11-2018 IPR002323 Cytochrome c, class IE GO:0005506|GO:0009055|GO:0020037 CDA09_00670 416ee2c3abdc01c26cd81d24b52b198c 155 PRINTS PR00607 Class IE cytochrome C signature 76 87 7.6E-13 T 01-11-2018 IPR002323 Cytochrome c, class IE GO:0005506|GO:0009055|GO:0020037 CDA09_00670 416ee2c3abdc01c26cd81d24b52b198c 155 PRINTS PR00607 Class IE cytochrome C signature 87 97 7.6E-13 T 01-11-2018 IPR002323 Cytochrome c, class IE GO:0005506|GO:0009055|GO:0020037 CDA09_00670 416ee2c3abdc01c26cd81d24b52b198c 155 SUPERFAMILY SSF46626 19 147 6.88E-18 T 01-11-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 CDA09_11725 e82fdad8a34c68eaf0e978683e5d0098 67 Pfam PF01361 Tautomerase enzyme 2 61 8.3E-23 T 01-11-2018 IPR004370 4-oxalocrotonate tautomerase GO:0006725|GO:0016853 CDA09_11725 e82fdad8a34c68eaf0e978683e5d0098 67 SUPERFAMILY SSF55331 2 64 4.37E-22 T 01-11-2018 IPR014347 Tautomerase/MIF superfamily CDA09_11725 e82fdad8a34c68eaf0e978683e5d0098 67 TIGRFAM TIGR00013 taut: 4-oxalocrotonate tautomerase family enzyme 1 63 7.7E-26 T 01-11-2018 IPR018191 4-oxalocrotonate tautomerase, Pseudomonas-type GO:0006725|GO:0016853 CDA09_11725 e82fdad8a34c68eaf0e978683e5d0098 67 Gene3D G3DSA:3.30.429.10 2 66 1.4E-25 T 01-11-2018 IPR014347 Tautomerase/MIF superfamily CDA09_08275 6b17fd21f6e11b3f2bfa0b7d70e74c93 951 ProSitePatterns PS00587 Glycosyl hydrolases family 17 signature. 296 309 - T 01-11-2018 IPR000490 Glycoside hydrolase family 17 GO:0004553|GO:0005975 KEGG: 00500+3.2.1.39 CDA09_08275 6b17fd21f6e11b3f2bfa0b7d70e74c93 951 Pfam PF00332 Glycosyl hydrolases family 17 292 367 3.6E-7 T 01-11-2018 IPR000490 Glycoside hydrolase family 17 GO:0004553|GO:0005975 KEGG: 00500+3.2.1.39 CDA09_08275 6b17fd21f6e11b3f2bfa0b7d70e74c93 951 Pfam PF13641 Glycosyltransferase like family 2 497 724 3.1E-25 T 01-11-2018 CDA09_08275 6b17fd21f6e11b3f2bfa0b7d70e74c93 951 SUPERFAMILY SSF53448 487 749 1.41E-42 T 01-11-2018 IPR029044 Nucleotide-diphospho-sugar transferases CDA09_08275 6b17fd21f6e11b3f2bfa0b7d70e74c93 951 Gene3D G3DSA:3.90.550.10 486 708 1.3E-55 T 01-11-2018 IPR029044 Nucleotide-diphospho-sugar transferases CDA09_08275 6b17fd21f6e11b3f2bfa0b7d70e74c93 951 Gene3D G3DSA:3.20.20.80 114 390 5.1E-21 T 01-11-2018 CDA09_08275 6b17fd21f6e11b3f2bfa0b7d70e74c93 951 SUPERFAMILY SSF51445 113 373 6.26E-49 T 01-11-2018 IPR017853 Glycoside hydrolase superfamily CDA09_21065 9711ac7dd40dd62ca6cb291698e87c18 308 Pfam PF01867 CRISPR associated protein Cas1 134 235 1.3E-8 T 01-11-2018 IPR002729 CRISPR-associated protein Cas1 GO:0003676|GO:0004519|GO:0043571|GO:0046872|GO:0051607 CDA09_21065 9711ac7dd40dd62ca6cb291698e87c18 308 Gene3D G3DSA:1.20.120.920 99 295 2.0E-86 T 01-11-2018 CDA09_21065 9711ac7dd40dd62ca6cb291698e87c18 308 TIGRFAM TIGR03638 cas1_ECOLI: CRISPR-associated endonuclease Cas1, subtype I-E/ECOLI 7 276 5.5E-112 T 01-11-2018 IPR019851 CRISPR-associated protein Cas1, ECOLI subtype GO:0004520|GO:0043571|GO:0046872 CDA09_21065 9711ac7dd40dd62ca6cb291698e87c18 308 Hamap MF_01470 CRISPR-associated endonuclease Cas1 [cas1]. 11 283 16.862 T 01-11-2018 IPR002729 CRISPR-associated protein Cas1 GO:0003676|GO:0004519|GO:0043571|GO:0046872|GO:0051607 CDA09_21065 9711ac7dd40dd62ca6cb291698e87c18 308 TIGRFAM TIGR00287 cas1: CRISPR-associated endonuclease Cas1 137 260 5.4E-27 T 01-11-2018 IPR002729 CRISPR-associated protein Cas1 GO:0003676|GO:0004519|GO:0043571|GO:0046872|GO:0051607 CDA09_21065 9711ac7dd40dd62ca6cb291698e87c18 308 Gene3D G3DSA:3.100.10.20 2 98 2.1E-32 T 01-11-2018 CDA09_21735 1caf676d7af88231a553ac92bde98725 336 SUPERFAMILY SSF56645 3 87 2.26E-7 T 01-11-2018 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain superfamily GO:0016627|GO:0055114 CDA09_21735 1caf676d7af88231a553ac92bde98725 336 Gene3D G3DSA:1.10.540.10 1 99 1.7E-10 T 01-11-2018 IPR037069 Acyl-CoA dehydrogenase/oxidase, N-terminal domain superfamily GO:0016627|GO:0050660|GO:0055114 CDA09_21735 1caf676d7af88231a553ac92bde98725 336 SUPERFAMILY SSF47203 183 319 4.99E-26 T 01-11-2018 IPR036250 Acyl-CoA dehydrogenase-like, C-terminal GO:0016627|GO:0055114 CDA09_21735 1caf676d7af88231a553ac92bde98725 336 Gene3D G3DSA:1.20.140.10 178 330 1.4E-23 T 01-11-2018 CDA09_21735 1caf676d7af88231a553ac92bde98725 336 Pfam PF00441 Acyl-CoA dehydrogenase, C-terminal domain 186 307 9.2E-17 T 01-11-2018 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal GO:0016627|GO:0055114 CDA09_05205 eae7a1b8eec5f30de247766e253164d1 233 Pfam PF01895 PhoU domain 124 209 3.2E-17 T 01-11-2018 IPR026022 PhoU domain CDA09_05205 eae7a1b8eec5f30de247766e253164d1 233 Pfam PF01895 PhoU domain 20 106 1.4E-18 T 01-11-2018 IPR026022 PhoU domain CDA09_05205 eae7a1b8eec5f30de247766e253164d1 233 Gene3D G3DSA:1.20.58.220 1 114 9.9E-36 T 01-11-2018 IPR038078 PhoU-like domain superfamily CDA09_05205 eae7a1b8eec5f30de247766e253164d1 233 Gene3D G3DSA:1.20.58.220 115 231 1.7E-33 T 01-11-2018 IPR038078 PhoU-like domain superfamily CDA09_05205 eae7a1b8eec5f30de247766e253164d1 233 PIRSF PIRSF003107 2 223 2.0E-62 T 01-11-2018 IPR028366 Phosphate transport system protein PhoU GO:0005737|GO:0030643|GO:0045936 CDA09_05205 eae7a1b8eec5f30de247766e253164d1 233 SUPERFAMILY SSF109755 7 225 8.27E-67 T 01-11-2018 CDA09_05205 eae7a1b8eec5f30de247766e253164d1 233 TIGRFAM TIGR02135 phoU_full: phosphate transport system regulatory protein PhoU 7 218 1.9E-69 T 01-11-2018 IPR028366 Phosphate transport system protein PhoU GO:0005737|GO:0030643|GO:0045936 CDA09_05360 c2e9600bb248470210cdf8a48e41077b 167 Gene3D G3DSA:1.10.1740.10 2 64 5.8E-21 T 01-11-2018 CDA09_05360 c2e9600bb248470210cdf8a48e41077b 167 TIGRFAM TIGR02937 sigma70-ECF: RNA polymerase sigma factor, sigma-70 family 12 152 1.8E-20 T 01-11-2018 IPR014284 RNA polymerase sigma-70 like domain GO:0003700|GO:0006352|GO:0006355 CDA09_05360 c2e9600bb248470210cdf8a48e41077b 167 Gene3D G3DSA:1.10.10.10 94 155 5.0E-22 T 01-11-2018 IPR036388 Winged helix-like DNA-binding domain superfamily CDA09_05360 c2e9600bb248470210cdf8a48e41077b 167 SUPERFAMILY SSF88946 9 85 8.24E-14 T 01-11-2018 IPR013325 RNA polymerase sigma factor, region 2 GO:0003700|GO:0006352|GO:0006355 CDA09_05360 c2e9600bb248470210cdf8a48e41077b 167 Pfam PF04542 Sigma-70 region 2 11 69 2.7E-12 T 01-11-2018 IPR007627 RNA polymerase sigma-70 region 2 GO:0003700|GO:0006352|GO:0006355 CDA09_05360 c2e9600bb248470210cdf8a48e41077b 167 Pfam PF08281 Sigma-70, region 4 97 149 6.7E-18 T 01-11-2018 IPR013249 RNA polymerase sigma factor 70, region 4 type 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 CDA09_05360 c2e9600bb248470210cdf8a48e41077b 167 SUPERFAMILY SSF88659 93 153 6.54E-18 T 01-11-2018 IPR013324 RNA polymerase sigma factor, region 3/4-like CDA09_04455 cf3f5a71f722abd87a5c6c2fa070e54e 419 TIGRFAM TIGR01933 hflK: HflK protein 94 367 3.0E-97 T 01-11-2018 IPR010201 HflK GO:0016021 CDA09_04455 cf3f5a71f722abd87a5c6c2fa070e54e 419 Pfam PF01145 SPFH domain / Band 7 family 96 280 9.5E-25 T 01-11-2018 IPR001107 Band 7 domain CDA09_04455 cf3f5a71f722abd87a5c6c2fa070e54e 419 Gene3D G3DSA:3.30.479.30 149 256 5.7E-19 T 01-11-2018 CDA09_04455 cf3f5a71f722abd87a5c6c2fa070e54e 419 Pfam PF12221 Bacterial membrane protein N terminal 1 52 1.5E-12 T 01-11-2018 IPR020980 Menbrane protein HflK, N-terminal CDA09_04455 cf3f5a71f722abd87a5c6c2fa070e54e 419 SMART SM00244 92 265 6.9E-24 T 01-11-2018 IPR001107 Band 7 domain CDA09_04455 cf3f5a71f722abd87a5c6c2fa070e54e 419 SUPERFAMILY SSF117892 159 272 8.76E-20 T 01-11-2018 IPR036013 Band 7/SPFH domain superfamily CDA09_10230 da0b927b09947c7810b05de019a9027b 971 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 40 167 3.2E-9 T 01-11-2018 IPR000014 PAS domain CDA09_10230 da0b927b09947c7810b05de019a9027b 971 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 608 732 2.1E-23 T 01-11-2018 IPR000014 PAS domain CDA09_10230 da0b927b09947c7810b05de019a9027b 971 SUPERFAMILY SSF47384 173 255 7.06E-17 T 01-11-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 CDA09_10230 da0b927b09947c7810b05de019a9027b 971 SMART SM00387 859 970 2.1E-35 T 01-11-2018 IPR003594 Histidine kinase/HSP90-like ATPase CDA09_10230 da0b927b09947c7810b05de019a9027b 971 SMART SM00387 299 410 2.2E-32 T 01-11-2018 IPR003594 Histidine kinase/HSP90-like ATPase CDA09_10230 da0b927b09947c7810b05de019a9027b 971 PRINTS PR00344 Bacterial sensor protein C-terminal signature 901 915 1.8E-15 T 01-11-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 CDA09_10230 da0b927b09947c7810b05de019a9027b 971 PRINTS PR00344 Bacterial sensor protein C-terminal signature 930 948 1.8E-15 T 01-11-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 CDA09_10230 da0b927b09947c7810b05de019a9027b 971 PRINTS PR00344 Bacterial sensor protein C-terminal signature 954 967 1.8E-15 T 01-11-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 CDA09_10230 da0b927b09947c7810b05de019a9027b 971 PRINTS PR00344 Bacterial sensor protein C-terminal signature 919 929 1.8E-15 T 01-11-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 CDA09_10230 da0b927b09947c7810b05de019a9027b 971 Pfam PF00072 Response regulator receiver domain 451 561 1.5E-23 T 01-11-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 CDA09_10230 da0b927b09947c7810b05de019a9027b 971 SUPERFAMILY SSF55874 243 409 5.24E-40 T 01-11-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily CDA09_10230 da0b927b09947c7810b05de019a9027b 971 SUPERFAMILY SSF52172 449 568 3.13E-33 T 01-11-2018 IPR011006 CheY-like superfamily CDA09_10230 da0b927b09947c7810b05de019a9027b 971 Gene3D G3DSA:3.40.50.2300 442 574 3.5E-33 T 01-11-2018 CDA09_10230 da0b927b09947c7810b05de019a9027b 971 SMART SM00448 449 560 1.6E-31 T 01-11-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 CDA09_10230 da0b927b09947c7810b05de019a9027b 971 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 303 409 4.7E-21 T 01-11-2018 IPR003594 Histidine kinase/HSP90-like ATPase CDA09_10230 da0b927b09947c7810b05de019a9027b 971 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 860 969 1.1E-21 T 01-11-2018 IPR003594 Histidine kinase/HSP90-like ATPase CDA09_10230 da0b927b09947c7810b05de019a9027b 971 SMART SM00091 41 107 1.6E-5 T 01-11-2018 IPR000014 PAS domain CDA09_10230 da0b927b09947c7810b05de019a9027b 971 SMART SM00091 610 676 4.2E-10 T 01-11-2018 IPR000014 PAS domain CDA09_10230 da0b927b09947c7810b05de019a9027b 971 SMART SM00388 187 254 1.1E-13 T 01-11-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 CDA09_10230 da0b927b09947c7810b05de019a9027b 971 SMART SM00388 747 817 1.5E-6 T 01-11-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 CDA09_10230 da0b927b09947c7810b05de019a9027b 971 Pfam PF00989 PAS fold 611 703 6.1E-12 T 01-11-2018 IPR013767 PAS fold GO:0006355 CDA09_10230 da0b927b09947c7810b05de019a9027b 971 SUPERFAMILY SSF55785 604 723 4.67E-18 T 01-11-2018 IPR035965 PAS domain superfamily CDA09_10230 da0b927b09947c7810b05de019a9027b 971 SUPERFAMILY SSF47384 744 813 1.53E-7 T 01-11-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 CDA09_10230 da0b927b09947c7810b05de019a9027b 971 SMART SM00086 118 160 0.59 T 01-11-2018 IPR001610 PAC motif CDA09_10230 da0b927b09947c7810b05de019a9027b 971 SMART SM00086 683 725 5.5 T 01-11-2018 IPR001610 PAC motif CDA09_10230 da0b927b09947c7810b05de019a9027b 971 SUPERFAMILY SSF55785 39 157 2.09E-13 T 01-11-2018 IPR035965 PAS domain superfamily CDA09_10230 da0b927b09947c7810b05de019a9027b 971 Gene3D G3DSA:1.10.287.130 175 256 2.5E-19 T 01-11-2018 CDA09_10230 da0b927b09947c7810b05de019a9027b 971 Pfam PF08448 PAS fold 47 160 1.9E-11 T 01-11-2018 IPR013656 PAS fold-4 CDA09_10230 da0b927b09947c7810b05de019a9027b 971 Gene3D G3DSA:3.30.450.20 47 174 5.6E-25 T 01-11-2018 CDA09_10230 da0b927b09947c7810b05de019a9027b 971 Gene3D G3DSA:3.30.565.10 263 412 7.8E-36 T 01-11-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily CDA09_10230 da0b927b09947c7810b05de019a9027b 971 Gene3D G3DSA:3.30.565.10 817 971 1.3E-42 T 01-11-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily CDA09_10230 da0b927b09947c7810b05de019a9027b 971 Gene3D G3DSA:1.10.287.130 724 812 6.4E-18 T 01-11-2018 CDA09_10230 da0b927b09947c7810b05de019a9027b 971 Gene3D G3DSA:3.30.450.20 602 723 4.8E-21 T 01-11-2018 CDA09_10230 da0b927b09947c7810b05de019a9027b 971 Pfam PF00512 His Kinase A (phospho-acceptor) domain 188 254 1.1E-14 T 01-11-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 CDA09_10230 da0b927b09947c7810b05de019a9027b 971 Pfam PF00512 His Kinase A (phospho-acceptor) domain 748 813 7.1E-10 T 01-11-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 CDA09_10230 da0b927b09947c7810b05de019a9027b 971 SUPERFAMILY SSF55874 808 968 1.14E-37 T 01-11-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily CDA09_19500 0f7ca2707e249c4d2b01288682474b5f 109 ProSitePatterns PS00464 Ribosomal protein L22 signature. 83 107 - T 01-11-2018 IPR018260 Ribosomal protein L22/L17, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 CDA09_19500 0f7ca2707e249c4d2b01288682474b5f 109 Hamap MF_01331_B 50S ribosomal protein L22 [rplV]. 1 109 25.156 T 01-11-2018 IPR005727 Ribosomal protein L22, bacterial/chloroplast-type GO:0003735|GO:0006412|GO:0015934 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 CDA09_19500 0f7ca2707e249c4d2b01288682474b5f 109 SUPERFAMILY SSF54843 1 109 1.24E-39 T 01-11-2018 IPR036394 Ribosomal protein L22/L17 superfamily GO:0003735|GO:0005840|GO:0006412 CDA09_19500 0f7ca2707e249c4d2b01288682474b5f 109 Gene3D G3DSA:3.90.470.10 1 109 3.8E-42 T 01-11-2018 IPR036394 Ribosomal protein L22/L17 superfamily GO:0003735|GO:0005840|GO:0006412 CDA09_19500 0f7ca2707e249c4d2b01288682474b5f 109 TIGRFAM TIGR01044 rplV_bact: ribosomal protein uL22 5 107 6.5E-44 T 01-11-2018 IPR005727 Ribosomal protein L22, bacterial/chloroplast-type GO:0003735|GO:0006412|GO:0015934 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 CDA09_19500 0f7ca2707e249c4d2b01288682474b5f 109 Pfam PF00237 Ribosomal protein L22p/L17e 6 107 3.5E-34 T 01-11-2018 IPR001063 Ribosomal protein L22/L17 GO:0003735|GO:0005840|GO:0006412 CDA09_22080 9bce6560022702590ebcb2cb29ac441b 767 SUPERFAMILY SSF52540 359 744 2.17E-28 T 01-11-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CDA09_22080 9bce6560022702590ebcb2cb29ac441b 767 SUPERFAMILY SSF52540 77 419 7.71E-22 T 01-11-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CDA09_22080 9bce6560022702590ebcb2cb29ac441b 767 Pfam PF00271 Helicase conserved C-terminal domain 592 703 9.0E-7 T 01-11-2018 IPR001650 Helicase, C-terminal CDA09_22080 9bce6560022702590ebcb2cb29ac441b 767 Gene3D G3DSA:3.40.50.10810 307 465 5.8E-7 T 01-11-2018 IPR038718 SNF2-like, N-terminal domain superfamily CDA09_22080 9bce6560022702590ebcb2cb29ac441b 767 Gene3D G3DSA:3.40.50.300 503 757 2.1E-24 T 01-11-2018 CDA09_22080 9bce6560022702590ebcb2cb29ac441b 767 Gene3D G3DSA:3.40.50.300 68 178 1.1E-7 T 01-11-2018 CDA09_22080 9bce6560022702590ebcb2cb29ac441b 767 SMART SM00487 77 434 1.1E-7 T 01-11-2018 IPR014001 Helicase superfamily 1/2, ATP-binding domain CDA09_03820 f1d2c9d1de5f0d259eea5df6d8a7cc84 750 Gene3D G3DSA:3.90.100.10 629 749 3.8E-40 T 01-11-2018 CDA09_03820 f1d2c9d1de5f0d259eea5df6d8a7cc84 750 Gene3D G3DSA:3.40.640.10 149 453 2.2E-95 T 01-11-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 CDA09_03820 f1d2c9d1de5f0d259eea5df6d8a7cc84 750 SUPERFAMILY SSF55904 604 749 3.92E-47 T 01-11-2018 IPR036633 Orn/Lys/Arg decarboxylase, C-terminal domain superfamily GO:0003824 CDA09_03820 f1d2c9d1de5f0d259eea5df6d8a7cc84 750 Pfam PF03711 Orn/Lys/Arg decarboxylase, C-terminal domain 609 735 1.1E-46 T 01-11-2018 IPR008286 Orn/Lys/Arg decarboxylase, C-terminal GO:0003824 CDA09_03820 f1d2c9d1de5f0d259eea5df6d8a7cc84 750 PIRSF PIRSF009393 1 750 2.8E-279 T 01-11-2018 IPR011193 Ornithine/lysine/arginine decarboxylase GO:0005737|GO:0006520|GO:0016831 CDA09_03820 f1d2c9d1de5f0d259eea5df6d8a7cc84 750 Gene3D G3DSA:3.90.1150.10 457 628 2.3E-69 T 01-11-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 CDA09_03820 f1d2c9d1de5f0d259eea5df6d8a7cc84 750 SUPERFAMILY SSF53383 149 602 6.04E-120 T 01-11-2018 IPR015424 Pyridoxal phosphate-dependent transferase CDA09_03820 f1d2c9d1de5f0d259eea5df6d8a7cc84 750 Pfam PF03709 Orn/Lys/Arg decarboxylase, N-terminal domain 20 143 1.3E-37 T 01-11-2018 IPR005308 Orn/Lys/Arg decarboxylase, N-terminal GO:0016831 CDA09_03820 f1d2c9d1de5f0d259eea5df6d8a7cc84 750 Gene3D G3DSA:3.40.50.2300 5 147 9.4E-20 T 01-11-2018 CDA09_03820 f1d2c9d1de5f0d259eea5df6d8a7cc84 750 ProSitePatterns PS00703 Orn/Lys/Arg decarboxylases family 1 pyridoxal-P attachment site. 390 404 - T 01-11-2018 IPR000310 Orn/Lys/Arg decarboxylase, major domain GO:0003824 CDA09_03820 f1d2c9d1de5f0d259eea5df6d8a7cc84 750 Pfam PF01276 Orn/Lys/Arg decarboxylase, major domain 149 582 2.1E-150 T 01-11-2018 IPR000310 Orn/Lys/Arg decarboxylase, major domain GO:0003824 CDA09_07550 c13e3758a94824338b0f3e40ba3bf095 545 Gene3D G3DSA:3.30.450.20 18 136 1.7E-25 T 01-11-2018 CDA09_07550 c13e3758a94824338b0f3e40ba3bf095 545 Pfam PF00989 PAS fold 184 298 7.1E-5 T 01-11-2018 IPR013767 PAS fold GO:0006355 CDA09_07550 c13e3758a94824338b0f3e40ba3bf095 545 Gene3D G3DSA:3.30.450.20 171 307 2.2E-17 T 01-11-2018 CDA09_07550 c13e3758a94824338b0f3e40ba3bf095 545 Gene3D G3DSA:1.10.287.130 329 390 4.8E-7 T 01-11-2018 CDA09_07550 c13e3758a94824338b0f3e40ba3bf095 545 SMART SM00387 435 545 1.3E-19 T 01-11-2018 IPR003594 Histidine kinase/HSP90-like ATPase CDA09_07550 c13e3758a94824338b0f3e40ba3bf095 545 Pfam PF13426 PAS domain 40 132 8.1E-7 T 01-11-2018 IPR000014 PAS domain CDA09_07550 c13e3758a94824338b0f3e40ba3bf095 545 SMART SM00091 375 445 150.0 T 01-11-2018 IPR000014 PAS domain CDA09_07550 c13e3758a94824338b0f3e40ba3bf095 545 SMART SM00091 184 254 5.9 T 01-11-2018 IPR000014 PAS domain CDA09_07550 c13e3758a94824338b0f3e40ba3bf095 545 SMART SM00091 22 86 5.6 T 01-11-2018 IPR000014 PAS domain CDA09_07550 c13e3758a94824338b0f3e40ba3bf095 545 SUPERFAMILY SSF55785 171 300 4.54E-15 T 01-11-2018 IPR035965 PAS domain superfamily CDA09_07550 c13e3758a94824338b0f3e40ba3bf095 545 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 22 140 1.2E-14 T 01-11-2018 IPR000014 PAS domain CDA09_07550 c13e3758a94824338b0f3e40ba3bf095 545 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 181 307 1.2E-12 T 01-11-2018 IPR000014 PAS domain CDA09_07550 c13e3758a94824338b0f3e40ba3bf095 545 PRINTS PR00344 Bacterial sensor protein C-terminal signature 507 525 7.7E-14 T 01-11-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 CDA09_07550 c13e3758a94824338b0f3e40ba3bf095 545 PRINTS PR00344 Bacterial sensor protein C-terminal signature 531 544 7.7E-14 T 01-11-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 CDA09_07550 c13e3758a94824338b0f3e40ba3bf095 545 PRINTS PR00344 Bacterial sensor protein C-terminal signature 496 506 7.7E-14 T 01-11-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 CDA09_07550 c13e3758a94824338b0f3e40ba3bf095 545 PRINTS PR00344 Bacterial sensor protein C-terminal signature 478 492 7.7E-14 T 01-11-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 CDA09_07550 c13e3758a94824338b0f3e40ba3bf095 545 SUPERFAMILY SSF55874 392 545 5.5E-30 T 01-11-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily CDA09_07550 c13e3758a94824338b0f3e40ba3bf095 545 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 439 544 1.3E-14 T 01-11-2018 IPR003594 Histidine kinase/HSP90-like ATPase CDA09_07550 c13e3758a94824338b0f3e40ba3bf095 545 SUPERFAMILY SSF55785 38 141 8.68E-18 T 01-11-2018 IPR035965 PAS domain superfamily CDA09_07550 c13e3758a94824338b0f3e40ba3bf095 545 Gene3D G3DSA:3.30.565.10 392 545 1.5E-32 T 01-11-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily CDA09_07550 c13e3758a94824338b0f3e40ba3bf095 545 SMART SM00086 92 133 0.34 T 01-11-2018 IPR001610 PAC motif CDA09_07550 c13e3758a94824338b0f3e40ba3bf095 545 SMART SM00086 261 302 3.3 T 01-11-2018 IPR001610 PAC motif CDA09_00570 7853e031d251f04ea41fe75bdf2aa105 347 Gene3D G3DSA:3.30.420.40 13 332 1.0E-130 T 01-11-2018 CDA09_00570 7853e031d251f04ea41fe75bdf2aa105 347 SUPERFAMILY SSF53067 154 338 9.21E-49 T 01-11-2018 CDA09_00570 7853e031d251f04ea41fe75bdf2aa105 347 Gene3D G3DSA:3.30.420.40 159 322 1.0E-130 T 01-11-2018 CDA09_00570 7853e031d251f04ea41fe75bdf2aa105 347 PRINTS PR01652 Bacterial cell shape determinant MreB/Mbl protein signature 305 331 1.2E-62 T 01-11-2018 IPR004753 Cell shape determining protein MreB GO:0000902 CDA09_00570 7853e031d251f04ea41fe75bdf2aa105 347 PRINTS PR01652 Bacterial cell shape determinant MreB/Mbl protein signature 53 71 1.2E-62 T 01-11-2018 IPR004753 Cell shape determining protein MreB GO:0000902 CDA09_00570 7853e031d251f04ea41fe75bdf2aa105 347 PRINTS PR01652 Bacterial cell shape determinant MreB/Mbl protein signature 192 212 1.2E-62 T 01-11-2018 IPR004753 Cell shape determining protein MreB GO:0000902 CDA09_00570 7853e031d251f04ea41fe75bdf2aa105 347 PRINTS PR01652 Bacterial cell shape determinant MreB/Mbl protein signature 137 156 1.2E-62 T 01-11-2018 IPR004753 Cell shape determining protein MreB GO:0000902 CDA09_00570 7853e031d251f04ea41fe75bdf2aa105 347 PRINTS PR01652 Bacterial cell shape determinant MreB/Mbl protein signature 73 96 1.2E-62 T 01-11-2018 IPR004753 Cell shape determining protein MreB GO:0000902 CDA09_00570 7853e031d251f04ea41fe75bdf2aa105 347 TIGRFAM TIGR00904 mreB: cell shape determining protein, MreB/Mrl family 9 340 2.1E-158 T 01-11-2018 IPR004753 Cell shape determining protein MreB GO:0000902 CDA09_00570 7853e031d251f04ea41fe75bdf2aa105 347 SUPERFAMILY SSF53067 9 153 3.09E-39 T 01-11-2018 CDA09_00570 7853e031d251f04ea41fe75bdf2aa105 347 Pfam PF06723 MreB/Mbl protein 10 340 5.9E-150 T 01-11-2018 IPR004753 Cell shape determining protein MreB GO:0000902 CDA09_00570 7853e031d251f04ea41fe75bdf2aa105 347 Gene3D G3DSA:3.90.640.10 191 264 1.0E-130 T 01-11-2018 CDA09_10315 54d73b3d0b23488163093ba9a68ec7b1 484 Gene3D G3DSA:3.40.605.10 15 472 5.6E-179 T 01-11-2018 IPR016162 Aldehyde dehydrogenase, N-terminal GO:0016491|GO:0055114 CDA09_10315 54d73b3d0b23488163093ba9a68ec7b1 484 Gene3D G3DSA:3.40.309.10 255 449 5.6E-179 T 01-11-2018 IPR016163 Aldehyde dehydrogenase, C-terminal GO:0016491|GO:0016620|GO:0055114 CDA09_10315 54d73b3d0b23488163093ba9a68ec7b1 484 Pfam PF00171 Aldehyde dehydrogenase family 15 480 2.0E-160 T 01-11-2018 IPR015590 Aldehyde dehydrogenase domain GO:0016491|GO:0055114 CDA09_10315 54d73b3d0b23488163093ba9a68ec7b1 484 SUPERFAMILY SSF53720 2 483 1.09E-160 T 01-11-2018 IPR016161 Aldehyde/histidinol dehydrogenase GO:0016491|GO:0055114 CDA09_10315 54d73b3d0b23488163093ba9a68ec7b1 484 ProSitePatterns PS00070 Aldehyde dehydrogenases cysteine active site. 279 290 - T 01-11-2018 IPR016160 Aldehyde dehydrogenase, cysteine active site GO:0016491|GO:0055114 CDA09_10315 54d73b3d0b23488163093ba9a68ec7b1 484 ProSitePatterns PS00687 Aldehyde dehydrogenases glutamic acid active site. 251 258 - T 01-11-2018 IPR029510 Aldehyde dehydrogenase, glutamic acid active site GO:0016491|GO:0055114 CDA09_10315 54d73b3d0b23488163093ba9a68ec7b1 484 TIGRFAM TIGR03216 OH_muco_semi_DH: 2-hydroxymuconic semialdehyde dehydrogenase 4 484 1.3E-274 T 01-11-2018 IPR017628 2-hydroxymuconic semialdehyde dehydrogenase GO:0016620|GO:0055114 CDA09_10185 c9907aa584160e9edd7334d89ff46d4b 263 SMART SM00382 41 235 6.9E-15 T 01-11-2018 IPR003593 AAA+ ATPase domain CDA09_10185 c9907aa584160e9edd7334d89ff46d4b 263 Gene3D G3DSA:3.40.50.300 12 258 1.6E-68 T 01-11-2018 CDA09_10185 c9907aa584160e9edd7334d89ff46d4b 263 TIGRFAM TIGR00972 3a0107s01c2: phosphate ABC transporter, ATP-binding protein 18 263 2.6E-121 T 01-11-2018 IPR005670 Phosphate transport system permease protein 1 GO:0005315|GO:0016020|GO:0035435 CDA09_10185 c9907aa584160e9edd7334d89ff46d4b 263 Pfam PF00005 ABC transporter 32 188 3.5E-35 T 01-11-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 CDA09_10185 c9907aa584160e9edd7334d89ff46d4b 263 ProSitePatterns PS00211 ABC transporters family signature. 160 174 - T 01-11-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 CDA09_10185 c9907aa584160e9edd7334d89ff46d4b 263 SUPERFAMILY SSF52540 17 249 4.98E-62 T 01-11-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CDA09_15925 dc9c7d228b5006fb61bbeed6cdc82d65 322 Gene3D G3DSA:3.20.20.70 1 234 1.9E-65 T 01-11-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 CDA09_15925 dc9c7d228b5006fb61bbeed6cdc82d65 322 SUPERFAMILY SSF51395 1 300 3.48E-58 T 01-11-2018 CDA09_15925 dc9c7d228b5006fb61bbeed6cdc82d65 322 Gene3D G3DSA:1.20.225.30 245 313 3.5E-11 T 01-11-2018 CDA09_15925 dc9c7d228b5006fb61bbeed6cdc82d65 322 Hamap MF_02043 tRNA-dihydrouridine(16) synthase [dusC]. 1 311 48.896 T 01-11-2018 IPR032886 tRNA-dihydrouridine(16) synthase GO:0002943|GO:0017150 CDA09_15925 dc9c7d228b5006fb61bbeed6cdc82d65 322 PIRSF PIRSF006621 1 318 4.1E-64 T 01-11-2018 IPR001269 tRNA-dihydrouridine synthase GO:0008033|GO:0017150|GO:0050660|GO:0055114 CDA09_15925 dc9c7d228b5006fb61bbeed6cdc82d65 322 Pfam PF01207 Dihydrouridine synthase (Dus) 1 230 8.6E-57 T 01-11-2018 IPR001269 tRNA-dihydrouridine synthase GO:0008033|GO:0017150|GO:0050660|GO:0055114 CDA09_15925 dc9c7d228b5006fb61bbeed6cdc82d65 322 ProSitePatterns PS01136 Uncharacterized protein family UPF0034 signature. 85 103 - T 01-11-2018 IPR018517 tRNA-dihydrouridine synthase, conserved site GO:0008033|GO:0017150|GO:0050660|GO:0055114 CDA09_19315 87a22f644dfc6a02b456776791e24b25 681 Gene3D G3DSA:1.10.10.60 622 673 1.2E-10 T 01-11-2018 CDA09_19315 87a22f644dfc6a02b456776791e24b25 681 Gene3D G3DSA:3.40.50.300 345 527 8.7E-59 T 01-11-2018 CDA09_19315 87a22f644dfc6a02b456776791e24b25 681 ProSitePatterns PS00676 Sigma-54 interaction domain ATP-binding region B signature. 442 457 - T 01-11-2018 IPR025943 Sigma-54 interaction domain, ATP-binding site 2 CDA09_19315 87a22f644dfc6a02b456776791e24b25 681 Gene3D G3DSA:3.30.450.40 30 217 3.3E-56 T 01-11-2018 IPR029016 GAF-like domain superfamily CDA09_19315 87a22f644dfc6a02b456776791e24b25 681 SMART SM00382 375 519 4.5E-10 T 01-11-2018 IPR003593 AAA+ ATPase domain CDA09_19315 87a22f644dfc6a02b456776791e24b25 681 Gene3D G3DSA:1.10.8.60 528 606 4.4E-22 T 01-11-2018 CDA09_19315 87a22f644dfc6a02b456776791e24b25 681 Pfam PF02954 Bacterial regulatory protein, Fis family 630 667 1.0E-8 T 01-11-2018 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 CDA09_19315 87a22f644dfc6a02b456776791e24b25 681 PRINTS PR01590 FIS bacterial regulatory protein HTH signature 635 652 1.7E-8 T 01-11-2018 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 CDA09_19315 87a22f644dfc6a02b456776791e24b25 681 PRINTS PR01590 FIS bacterial regulatory protein HTH signature 652 672 1.7E-8 T 01-11-2018 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 CDA09_19315 87a22f644dfc6a02b456776791e24b25 681 ProSitePatterns PS00688 Sigma-54 interaction domain C-terminal part signature. 569 578 - T 01-11-2018 IPR025944 Sigma-54 interaction domain, conserved site CDA09_19315 87a22f644dfc6a02b456776791e24b25 681 Pfam PF01590 GAF domain 118 214 1.9E-6 T 01-11-2018 IPR003018 GAF domain GO:0005515 CDA09_19315 87a22f644dfc6a02b456776791e24b25 681 ProSitePatterns PS00675 Sigma-54 interaction domain ATP-binding region A signature. 379 392 - T 01-11-2018 IPR025662 Sigma-54 interaction domain, ATP-binding site 1 CDA09_19315 87a22f644dfc6a02b456776791e24b25 681 SUPERFAMILY SSF52540 355 599 6.05E-66 T 01-11-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CDA09_19315 87a22f644dfc6a02b456776791e24b25 681 SUPERFAMILY SSF46689 569 671 3.14E-10 T 01-11-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 CDA09_19315 87a22f644dfc6a02b456776791e24b25 681 Pfam PF00158 Sigma-54 interaction domain 355 522 4.8E-60 T 01-11-2018 IPR002078 RNA polymerase sigma factor 54 interaction domain GO:0005524|GO:0006355|GO:0008134 CDA09_04160 18c41e272c125f9720a0492c7a17cdb5 277 Gene3D G3DSA:3.10.580.10 40 185 2.0E-49 T 01-11-2018 CDA09_04160 18c41e272c125f9720a0492c7a17cdb5 277 SMART SM00116 69 117 17.0 T 01-11-2018 IPR000644 CBS domain CDA09_04160 18c41e272c125f9720a0492c7a17cdb5 277 SMART SM00116 129 177 1.2 T 01-11-2018 IPR000644 CBS domain CDA09_04160 18c41e272c125f9720a0492c7a17cdb5 277 Pfam PF00571 CBS domain 127 177 8.3E-5 T 01-11-2018 IPR000644 CBS domain CDA09_04160 18c41e272c125f9720a0492c7a17cdb5 277 Pfam PF00571 CBS domain 60 117 3.4E-4 T 01-11-2018 IPR000644 CBS domain CDA09_04160 18c41e272c125f9720a0492c7a17cdb5 277 Pfam PF03471 Transporter associated domain 197 270 3.9E-17 T 01-11-2018 IPR005170 Transporter-associated domain CDA09_04160 18c41e272c125f9720a0492c7a17cdb5 277 SUPERFAMILY SSF56176 192 270 1.88E-19 T 01-11-2018 IPR036318 FAD-binding, type PCMH-like superfamily GO:0050660 CDA09_04160 18c41e272c125f9720a0492c7a17cdb5 277 Gene3D G3DSA:3.30.465.10 186 270 5.9E-25 T 01-11-2018 IPR016169 FAD-binding, type PCMH, subdomain 2 CDA09_04160 18c41e272c125f9720a0492c7a17cdb5 277 SUPERFAMILY SSF54631 49 188 9.98E-32 T 01-11-2018 CDA09_04160 18c41e272c125f9720a0492c7a17cdb5 277 SMART SM01091 194 272 1.5E-23 T 01-11-2018 IPR005170 Transporter-associated domain CDA09_22600 3eb0be752e533cd0118ff807037cc29d 248 SUPERFAMILY SSF51735 4 246 1.96E-84 T 01-11-2018 IPR036291 NAD(P)-binding domain superfamily CDA09_22600 3eb0be752e533cd0118ff807037cc29d 248 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 141 169 - T 01-11-2018 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 CDA09_22600 3eb0be752e533cd0118ff807037cc29d 248 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 134 142 4.4E-9 T 01-11-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CDA09_22600 3eb0be752e533cd0118ff807037cc29d 248 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 81 92 4.4E-9 T 01-11-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CDA09_22600 3eb0be752e533cd0118ff807037cc29d 248 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 154 173 4.4E-9 T 01-11-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CDA09_22600 3eb0be752e533cd0118ff807037cc29d 248 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 12 245 1.2E-64 T 01-11-2018 CDA09_22600 3eb0be752e533cd0118ff807037cc29d 248 Gene3D G3DSA:3.40.50.720 1 247 4.0E-85 T 01-11-2018 CDA09_22600 3eb0be752e533cd0118ff807037cc29d 248 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 7 24 3.1E-39 T 01-11-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CDA09_22600 3eb0be752e533cd0118ff807037cc29d 248 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 154 173 3.1E-39 T 01-11-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CDA09_22600 3eb0be752e533cd0118ff807037cc29d 248 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 81 92 3.1E-39 T 01-11-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CDA09_22600 3eb0be752e533cd0118ff807037cc29d 248 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 175 192 3.1E-39 T 01-11-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CDA09_22600 3eb0be752e533cd0118ff807037cc29d 248 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 128 144 3.1E-39 T 01-11-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CDA09_22600 3eb0be752e533cd0118ff807037cc29d 248 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 208 228 3.1E-39 T 01-11-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CDA09_00140 4b782764c7ff9040e77b43e310da882a 692 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 530 687 2.6E-46 T 01-11-2018 IPR000160 GGDEF domain CDA09_00140 4b782764c7ff9040e77b43e310da882a 692 SMART SM00091 405 473 0.43 T 01-11-2018 IPR000014 PAS domain CDA09_00140 4b782764c7ff9040e77b43e310da882a 692 SMART SM00091 278 346 9.0E-7 T 01-11-2018 IPR000014 PAS domain CDA09_00140 4b782764c7ff9040e77b43e310da882a 692 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 275 398 1.0E-12 T 01-11-2018 IPR000014 PAS domain CDA09_00140 4b782764c7ff9040e77b43e310da882a 692 SUPERFAMILY SSF55073 537 688 1.41E-45 T 01-11-2018 IPR029787 Nucleotide cyclase CDA09_00140 4b782764c7ff9040e77b43e310da882a 692 SUPERFAMILY SSF55785 283 396 3.49E-20 T 01-11-2018 IPR035965 PAS domain superfamily CDA09_00140 4b782764c7ff9040e77b43e310da882a 692 Pfam PF11845 Protein of unknown function (DUF3365) 17 197 1.9E-31 T 01-11-2018 IPR021796 Protein of unknown function DUF3365 CDA09_00140 4b782764c7ff9040e77b43e310da882a 692 Gene3D G3DSA:3.30.70.270 521 690 1.0E-54 T 01-11-2018 CDA09_00140 4b782764c7ff9040e77b43e310da882a 692 Gene3D G3DSA:3.30.450.20 287 398 8.1E-26 T 01-11-2018 CDA09_00140 4b782764c7ff9040e77b43e310da882a 692 SMART SM00267 521 689 1.1E-59 T 01-11-2018 IPR000160 GGDEF domain CDA09_00140 4b782764c7ff9040e77b43e310da882a 692 SMART SM00086 479 521 4.9E-5 T 01-11-2018 IPR001610 PAC motif CDA09_00140 4b782764c7ff9040e77b43e310da882a 692 SMART SM00086 352 393 2.6E-5 T 01-11-2018 IPR001610 PAC motif CDA09_00140 4b782764c7ff9040e77b43e310da882a 692 Pfam PF00990 Diguanylate cyclase, GGDEF domain 532 684 4.1E-44 T 01-11-2018 IPR000160 GGDEF domain CDA09_00140 4b782764c7ff9040e77b43e310da882a 692 Gene3D G3DSA:3.30.450.20 403 473 2.4E-16 T 01-11-2018 CDA09_00140 4b782764c7ff9040e77b43e310da882a 692 SUPERFAMILY SSF55785 413 523 1.61E-16 T 01-11-2018 IPR035965 PAS domain superfamily CDA09_00140 4b782764c7ff9040e77b43e310da882a 692 Gene3D G3DSA:2.10.70.100 476 520 1.8E-5 T 01-11-2018 CDA09_00140 4b782764c7ff9040e77b43e310da882a 692 Pfam PF08447 PAS fold 302 385 2.2E-14 T 01-11-2018 IPR013655 PAS fold-3 GO:0005515 CDA09_00140 4b782764c7ff9040e77b43e310da882a 692 Pfam PF08447 PAS fold 428 515 2.8E-13 T 01-11-2018 IPR013655 PAS fold-3 GO:0005515 CDA09_09100 ed885e497014ff27080772691789badd 854 SUPERFAMILY SSF82866 182 399 4.32E-26 T 01-11-2018 CDA09_09100 ed885e497014ff27080772691789badd 854 Pfam PF03176 MMPL family 168 432 6.6E-11 T 01-11-2018 IPR004869 Membrane transport protein MMPL domain GO:0016020 CDA09_09100 ed885e497014ff27080772691789badd 854 Pfam PF03176 MMPL family 581 792 5.0E-13 T 01-11-2018 IPR004869 Membrane transport protein MMPL domain GO:0016020 CDA09_09100 ed885e497014ff27080772691789badd 854 SUPERFAMILY SSF82866 643 794 6.8E-27 T 01-11-2018 CDA09_09100 ed885e497014ff27080772691789badd 854 Gene3D G3DSA:1.20.1640.10 622 803 3.0E-9 T 01-11-2018 CDA09_12330 5634e55f94b883759859da2b1b58c86c 190 Pfam PF07209 Protein of unknown function (DUF1415) 5 174 2.9E-72 T 01-11-2018 IPR009858 Protein of unknown function DUF1415 CDA09_18840 51ebf76cbd416705eea6e412313983a1 208 Pfam PF00196 Bacterial regulatory proteins, luxR family 142 194 9.7E-20 T 01-11-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 CDA09_18840 51ebf76cbd416705eea6e412313983a1 208 SUPERFAMILY SSF46894 132 202 6.8E-22 T 01-11-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 CDA09_18840 51ebf76cbd416705eea6e412313983a1 208 SMART SM00421 139 196 4.5E-26 T 01-11-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 CDA09_18840 51ebf76cbd416705eea6e412313983a1 208 Gene3D G3DSA:1.10.10.10 75 207 7.4E-27 T 01-11-2018 IPR036388 Winged helix-like DNA-binding domain superfamily CDA09_18840 51ebf76cbd416705eea6e412313983a1 208 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 142 156 1.3E-13 T 01-11-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 CDA09_18840 51ebf76cbd416705eea6e412313983a1 208 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 172 184 1.3E-13 T 01-11-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 CDA09_18840 51ebf76cbd416705eea6e412313983a1 208 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 156 172 1.3E-13 T 01-11-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 CDA09_18840 51ebf76cbd416705eea6e412313983a1 208 ProSitePatterns PS00622 LuxR-type HTH domain signature. 156 183 - T 01-11-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 CDA09_03265 ed9341fd235f4adc0f94232f1bbea589 433 SUPERFAMILY SSF54862 50 111 9.18E-18 T 01-11-2018 CDA09_03265 ed9341fd235f4adc0f94232f1bbea589 433 SUPERFAMILY SSF51905 108 160 2.36E-5 T 01-11-2018 IPR036188 FAD/NAD(P)-binding domain superfamily CDA09_03265 ed9341fd235f4adc0f94232f1bbea589 433 Gene3D G3DSA:3.50.50.60 293 410 3.9E-47 T 01-11-2018 IPR036188 FAD/NAD(P)-binding domain superfamily CDA09_03265 ed9341fd235f4adc0f94232f1bbea589 433 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 169 188 5.0E-12 T 01-11-2018 CDA09_03265 ed9341fd235f4adc0f94232f1bbea589 433 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 320 338 5.0E-12 T 01-11-2018 CDA09_03265 ed9341fd235f4adc0f94232f1bbea589 433 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 282 300 5.0E-12 T 01-11-2018 CDA09_03265 ed9341fd235f4adc0f94232f1bbea589 433 Gene3D G3DSA:3.50.50.60 168 429 3.9E-47 T 01-11-2018 IPR036188 FAD/NAD(P)-binding domain superfamily CDA09_03265 ed9341fd235f4adc0f94232f1bbea589 433 Pfam PF13738 Pyridine nucleotide-disulphide oxidoreductase 170 427 1.2E-38 T 01-11-2018 CDA09_03265 ed9341fd235f4adc0f94232f1bbea589 433 Pfam PF13237 4Fe-4S dicluster domain 53 100 4.1E-6 T 01-11-2018 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain CDA09_03265 ed9341fd235f4adc0f94232f1bbea589 433 Gene3D G3DSA:3.30.70.20 79 108 3.9E-5 T 01-11-2018 CDA09_03265 ed9341fd235f4adc0f94232f1bbea589 433 Gene3D G3DSA:3.30.70.20 34 78 4.4E-5 T 01-11-2018 CDA09_03265 ed9341fd235f4adc0f94232f1bbea589 433 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 316 340 4.0E-19 T 01-11-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 CDA09_03265 ed9341fd235f4adc0f94232f1bbea589 433 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 168 190 4.0E-19 T 01-11-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 CDA09_03265 ed9341fd235f4adc0f94232f1bbea589 433 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 373 389 4.0E-19 T 01-11-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 CDA09_03265 ed9341fd235f4adc0f94232f1bbea589 433 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 281 289 4.0E-19 T 01-11-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 CDA09_03265 ed9341fd235f4adc0f94232f1bbea589 433 SUPERFAMILY SSF51905 168 427 1.7E-28 T 01-11-2018 IPR036188 FAD/NAD(P)-binding domain superfamily CDA09_16050 cf63bd9dc678d490c27f964c34020748 533 Pfam PF09099 Quinohemoprotein amine dehydrogenase, alpha subunit domain III 318 398 6.4E-26 T 01-11-2018 IPR015183 Quinohemoprotein amine dehydrogenase, alpha subunit domain III CDA09_16050 cf63bd9dc678d490c27f964c34020748 533 Pfam PF14930 Quinohemoprotein amine dehydrogenase, alpha subunit domain II 208 311 8.9E-35 T 01-11-2018 IPR009111 Quinohemoprotein amine dehydrogenase, alpha subunit, domain 2 CDA09_16050 cf63bd9dc678d490c27f964c34020748 533 Gene3D G3DSA:1.10.760.10 34 97 3.9E-6 T 01-11-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 CDA09_16050 cf63bd9dc678d490c27f964c34020748 533 SUPERFAMILY SSF81296 399 533 2.38E-50 T 01-11-2018 IPR014756 Immunoglobulin E-set CDA09_16050 cf63bd9dc678d490c27f964c34020748 533 Pfam PF09098 Quinohemoprotein amine dehydrogenase A, alpha subunit, haem binding 36 198 4.3E-77 T 01-11-2018 IPR015182 Quinohemoprotein amine dehydrogenase, alpha subunit, haem binding domain CDA09_16050 cf63bd9dc678d490c27f964c34020748 533 TIGRFAM TIGR03908 QH_alpha: quinohemoprotein amine dehydrogenase, alpha subunit 31 532 5.1E-218 T 01-11-2018 IPR023887 Quinohemoprotein amine dehydrogenase, alpha subunit CDA09_16050 cf63bd9dc678d490c27f964c34020748 533 SUPERFAMILY SSF81296 317 397 6.58E-18 T 01-11-2018 IPR014756 Immunoglobulin E-set CDA09_16050 cf63bd9dc678d490c27f964c34020748 533 SUPERFAMILY SSF46626 118 195 1.6E-35 T 01-11-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 CDA09_16050 cf63bd9dc678d490c27f964c34020748 533 Gene3D G3DSA:2.60.40.10 398 525 9.5E-47 T 01-11-2018 IPR013783 Immunoglobulin-like fold CDA09_16050 cf63bd9dc678d490c27f964c34020748 533 Gene3D G3DSA:2.60.40.10 318 397 1.4E-26 T 01-11-2018 IPR013783 Immunoglobulin-like fold CDA09_16050 cf63bd9dc678d490c27f964c34020748 533 SUPERFAMILY SSF46626 34 112 2.62E-13 T 01-11-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 CDA09_16050 cf63bd9dc678d490c27f964c34020748 533 Pfam PF09100 Quinohemoprotein amine dehydrogenase, alpha subunit domain IV 403 531 8.2E-54 T 01-11-2018 IPR015184 Quinohemoprotein amine dehydrogenase, alpha subunit domain IV CDA09_16050 cf63bd9dc678d490c27f964c34020748 533 Gene3D G3DSA:2.40.128.120 206 314 1.2E-33 T 01-11-2018 IPR036718 Quinohemoprotein amine dehydrogenase alpha subunit, domain 2 superfamily CDA09_16050 cf63bd9dc678d490c27f964c34020748 533 SUPERFAMILY SSF69298 195 311 2.49E-36 T 01-11-2018 IPR036718 Quinohemoprotein amine dehydrogenase alpha subunit, domain 2 superfamily CDA09_03580 7bc7f043f2a97a179ea6b2c6072ee0bb 1126 Gene3D G3DSA:3.10.620.30 107 286 1.8E-27 T 01-11-2018 CDA09_03580 7bc7f043f2a97a179ea6b2c6072ee0bb 1126 SMART SM00460 176 252 4.3E-21 T 01-11-2018 IPR002931 Transglutaminase-like CDA09_03580 7bc7f043f2a97a179ea6b2c6072ee0bb 1126 Pfam PF09899 Putative amidoligase enzyme (DUF2126) 280 1119 0.0 T 01-11-2018 IPR018667 Domain of unknown function DUF2126 CDA09_03580 7bc7f043f2a97a179ea6b2c6072ee0bb 1126 Pfam PF08379 Bacterial transglutaminase-like N-terminal region 6 84 1.6E-28 T 01-11-2018 IPR013589 Bacterial transglutaminase-like, N-terminal CDA09_03580 7bc7f043f2a97a179ea6b2c6072ee0bb 1126 SUPERFAMILY SSF54001 9 341 3.08E-73 T 01-11-2018 IPR038765 Papain-like cysteine peptidase superfamily CDA09_03580 7bc7f043f2a97a179ea6b2c6072ee0bb 1126 Pfam PF01841 Transglutaminase-like superfamily 138 250 1.0E-18 T 01-11-2018 IPR002931 Transglutaminase-like CDA09_06695 97dd15007872f34fbc0d545159e5e524 157 Gene3D G3DSA:1.20.58.300 9 129 6.8E-22 T 01-11-2018 CDA09_06695 97dd15007872f34fbc0d545159e5e524 157 SUPERFAMILY SSF140566 8 129 1.01E-21 T 01-11-2018 IPR036679 FlgN-like superfamily GO:0005515|GO:0044780 CDA09_06695 97dd15007872f34fbc0d545159e5e524 157 Pfam PF05130 FlgN protein 6 146 2.2E-24 T 01-11-2018 IPR007809 FlgN-like protein GO:0005515|GO:0044780 CDA09_00365 a65b920333579772f3c436061f139cb3 166 Pfam PF08534 Redoxin 20 162 3.4E-26 T 01-11-2018 IPR013740 Redoxin GO:0016491 Reactome: R-HSA-3299685|Reactome: R-HSA-5628897 CDA09_00365 a65b920333579772f3c436061f139cb3 166 Hamap MF_00269 Thiol peroxidase [tpx]. 3 166 37.204 T 01-11-2018 IPR002065 Thiol peroxidase Tpx GO:0008379|GO:0016209|GO:0055114 KEGG: 00480+1.11.1.15 CDA09_00365 a65b920333579772f3c436061f139cb3 166 Gene3D G3DSA:3.40.30.10 1 166 2.9E-45 T 01-11-2018 CDA09_00365 a65b920333579772f3c436061f139cb3 166 SUPERFAMILY SSF52833 1 163 1.01E-39 T 01-11-2018 IPR036249 Thioredoxin-like superfamily CDA09_00365 a65b920333579772f3c436061f139cb3 166 ProSitePatterns PS01265 Tpx family signature. 83 94 - T 01-11-2018 IPR018219 Thiol peroxidase conserved site GO:0016684|GO:0055114 KEGG: 00480+1.11.1.15 CDA09_17555 87af710780f36c03c709bd3d2aa180f5 568 SUPERFAMILY SSF50249 22 121 2.26E-18 T 01-11-2018 IPR012340 Nucleic acid-binding, OB-fold CDA09_17555 87af710780f36c03c709bd3d2aa180f5 568 Gene3D G3DSA:2.40.50.140 196 276 1.1E-28 T 01-11-2018 CDA09_17555 87af710780f36c03c709bd3d2aa180f5 568 Gene3D G3DSA:2.40.50.140 17 106 1.4E-15 T 01-11-2018 CDA09_17555 87af710780f36c03c709bd3d2aa180f5 568 Gene3D G3DSA:2.40.50.140 107 192 4.3E-7 T 01-11-2018 CDA09_17555 87af710780f36c03c709bd3d2aa180f5 568 Gene3D G3DSA:2.40.50.140 277 366 1.7E-28 T 01-11-2018 CDA09_17555 87af710780f36c03c709bd3d2aa180f5 568 Gene3D G3DSA:2.40.50.140 367 453 9.1E-24 T 01-11-2018 CDA09_17555 87af710780f36c03c709bd3d2aa180f5 568 TIGRFAM TIGR00717 rpsA: ribosomal protein bS1 12 529 4.6E-207 T 01-11-2018 IPR000110 Ribosomal protein S1 GO:0003723|GO:0003735|GO:0005840|GO:0006412 CDA09_17555 87af710780f36c03c709bd3d2aa180f5 568 SUPERFAMILY SSF50249 351 449 4.0E-22 T 01-11-2018 IPR012340 Nucleic acid-binding, OB-fold CDA09_17555 87af710780f36c03c709bd3d2aa180f5 568 SUPERFAMILY SSF50249 264 363 1.0E-26 T 01-11-2018 IPR012340 Nucleic acid-binding, OB-fold CDA09_17555 87af710780f36c03c709bd3d2aa180f5 568 SUPERFAMILY SSF50249 198 286 2.76E-27 T 01-11-2018 IPR012340 Nucleic acid-binding, OB-fold CDA09_17555 87af710780f36c03c709bd3d2aa180f5 568 SUPERFAMILY SSF50249 112 194 7.41E-14 T 01-11-2018 IPR012340 Nucleic acid-binding, OB-fold CDA09_17555 87af710780f36c03c709bd3d2aa180f5 568 PRINTS PR00681 Ribosomal protein S1 signature 48 62 1.3E-80 T 01-11-2018 CDA09_17555 87af710780f36c03c709bd3d2aa180f5 568 PRINTS PR00681 Ribosomal protein S1 signature 221 242 1.3E-80 T 01-11-2018 CDA09_17555 87af710780f36c03c709bd3d2aa180f5 568 PRINTS PR00681 Ribosomal protein S1 signature 135 152 1.3E-80 T 01-11-2018 CDA09_17555 87af710780f36c03c709bd3d2aa180f5 568 PRINTS PR00681 Ribosomal protein S1 signature 117 133 1.3E-80 T 01-11-2018 CDA09_17555 87af710780f36c03c709bd3d2aa180f5 568 PRINTS PR00681 Ribosomal protein S1 signature 164 184 1.3E-80 T 01-11-2018 CDA09_17555 87af710780f36c03c709bd3d2aa180f5 568 PRINTS PR00681 Ribosomal protein S1 signature 30 48 1.3E-80 T 01-11-2018 CDA09_17555 87af710780f36c03c709bd3d2aa180f5 568 PRINTS PR00681 Ribosomal protein S1 signature 93 112 1.3E-80 T 01-11-2018 CDA09_17555 87af710780f36c03c709bd3d2aa180f5 568 PRINTS PR00681 Ribosomal protein S1 signature 339 357 1.3E-80 T 01-11-2018 CDA09_17555 87af710780f36c03c709bd3d2aa180f5 568 PRINTS PR00681 Ribosomal protein S1 signature 299 318 1.3E-80 T 01-11-2018 CDA09_17555 87af710780f36c03c709bd3d2aa180f5 568 Pfam PF00575 S1 RNA binding domain 199 269 3.0E-23 T 01-11-2018 IPR003029 S1 domain GO:0003676 CDA09_17555 87af710780f36c03c709bd3d2aa180f5 568 Pfam PF00575 S1 RNA binding domain 457 529 1.9E-11 T 01-11-2018 IPR003029 S1 domain GO:0003676 CDA09_17555 87af710780f36c03c709bd3d2aa180f5 568 Pfam PF00575 S1 RNA binding domain 112 180 8.4E-9 T 01-11-2018 IPR003029 S1 domain GO:0003676 CDA09_17555 87af710780f36c03c709bd3d2aa180f5 568 Pfam PF00575 S1 RNA binding domain 29 95 3.9E-5 T 01-11-2018 IPR003029 S1 domain GO:0003676 CDA09_17555 87af710780f36c03c709bd3d2aa180f5 568 Pfam PF00575 S1 RNA binding domain 285 356 6.6E-22 T 01-11-2018 IPR003029 S1 domain GO:0003676 CDA09_17555 87af710780f36c03c709bd3d2aa180f5 568 Pfam PF00575 S1 RNA binding domain 370 443 3.1E-19 T 01-11-2018 IPR003029 S1 domain GO:0003676 CDA09_17555 87af710780f36c03c709bd3d2aa180f5 568 SMART SM00316 199 269 4.0E-30 T 01-11-2018 IPR022967 RNA-binding domain, S1 CDA09_17555 87af710780f36c03c709bd3d2aa180f5 568 SMART SM00316 112 180 3.4E-6 T 01-11-2018 IPR022967 RNA-binding domain, S1 CDA09_17555 87af710780f36c03c709bd3d2aa180f5 568 SMART SM00316 28 96 2.9E-5 T 01-11-2018 IPR022967 RNA-binding domain, S1 CDA09_17555 87af710780f36c03c709bd3d2aa180f5 568 SMART SM00316 371 443 1.3E-21 T 01-11-2018 IPR022967 RNA-binding domain, S1 CDA09_17555 87af710780f36c03c709bd3d2aa180f5 568 SMART SM00316 284 356 3.4E-25 T 01-11-2018 IPR022967 RNA-binding domain, S1 CDA09_17555 87af710780f36c03c709bd3d2aa180f5 568 SMART SM00316 458 529 3.3E-16 T 01-11-2018 IPR022967 RNA-binding domain, S1 CDA09_17555 87af710780f36c03c709bd3d2aa180f5 568 PIRSF PIRSF002111 1 543 2.5E-215 T 01-11-2018 IPR000110 Ribosomal protein S1 GO:0003723|GO:0003735|GO:0005840|GO:0006412 CDA09_17555 87af710780f36c03c709bd3d2aa180f5 568 Gene3D G3DSA:2.40.50.140 454 536 6.8E-17 T 01-11-2018 CDA09_17555 87af710780f36c03c709bd3d2aa180f5 568 SUPERFAMILY SSF50249 438 542 1.14E-19 T 01-11-2018 IPR012340 Nucleic acid-binding, OB-fold CDA09_17040 5d425e81271c42418795f234be6948f2 694 SUPERFAMILY SSF52096 2 284 6.34E-65 T 01-11-2018 IPR029045 ClpP/crotonase-like domain superfamily CDA09_17040 5d425e81271c42418795f234be6948f2 694 SUPERFAMILY SSF51735 291 470 8.1E-57 T 01-11-2018 IPR036291 NAD(P)-binding domain superfamily CDA09_17040 5d425e81271c42418795f234be6948f2 694 Pfam PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain 294 469 1.8E-62 T 01-11-2018 IPR006176 3-hydroxyacyl-CoA dehydrogenase, NAD binding GO:0003857|GO:0006631|GO:0016491|GO:0055114 KEGG: 00062+4.2.1.17+1.1.1.35|KEGG: 00071+4.2.1.17+1.1.1.35|KEGG: 00120+1.1.1.35|KEGG: 00280+4.2.1.17+1.1.1.35|KEGG: 00281+4.2.1.17+1.1.1.35|KEGG: 00310+4.2.1.17+1.1.1.35|KEGG: 00360+4.2.1.17|KEGG: 00362+4.2.1.17+1.1.1.35|KEGG: 00380+4.2.1.17+1.1.1.35|KEGG: 00410+4.2.1.17|KEGG: 00592+4.2.1.17|KEGG: 00623+1.1.1.35|KEGG: 00627+4.2.1.17|KEGG: 00640+4.2.1.17|KEGG: 00650+4.2.1.17+1.1.1.35|KEGG: 00720+4.2.1.17+1.1.1.35|KEGG: 00903+4.2.1.17|KEGG: 00930+4.2.1.17+1.1.1.35|MetaCyc: PWY-1361|MetaCyc: PWY-5109|MetaCyc: PWY-5136|MetaCyc: PWY-5138|MetaCyc: PWY-5177|MetaCyc: PWY-5789|MetaCyc: PWY-6435|MetaCyc: PWY-6583|MetaCyc: PWY-6863|MetaCyc: PWY-6883|MetaCyc: PWY-6944|MetaCyc: PWY-6945|MetaCyc: PWY-6946|MetaCyc: PWY-7007|MetaCyc: PWY-7046|MetaCyc: PWY-7094|MetaCyc: PWY-7216|MetaCyc: PWY-735|MetaCyc: PWY-7401|MetaCyc: PWY-7606|MetaCyc: PWY-7654|MetaCyc: PWY-7656|MetaCyc: PWY-7726|MetaCyc: PWY-7778|MetaCyc: PWY-7779 CDA09_17040 5d425e81271c42418795f234be6948f2 694 Gene3D G3DSA:3.90.226.10 2 285 3.4E-86 T 01-11-2018 CDA09_17040 5d425e81271c42418795f234be6948f2 694 Gene3D G3DSA:1.10.1040.50 477 691 9.6E-73 T 01-11-2018 CDA09_17040 5d425e81271c42418795f234be6948f2 694 SUPERFAMILY SSF48179 474 569 4.42E-24 T 01-11-2018 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily GO:0055114 CDA09_17040 5d425e81271c42418795f234be6948f2 694 Pfam PF00378 Enoyl-CoA hydratase/isomerase 10 197 2.3E-40 T 01-11-2018 IPR001753 Enoyl-CoA hydratase/isomerase GO:0003824 CDA09_17040 5d425e81271c42418795f234be6948f2 694 Gene3D G3DSA:3.40.50.720 286 476 2.0E-66 T 01-11-2018 CDA09_17040 5d425e81271c42418795f234be6948f2 694 Pfam PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain 474 567 2.7E-24 T 01-11-2018 IPR006108 3-hydroxyacyl-CoA dehydrogenase, C-terminal GO:0003857|GO:0006631|GO:0016491|GO:0055114 KEGG: 00062+4.2.1.17+1.1.1.35|KEGG: 00071+4.2.1.17+1.1.1.35|KEGG: 00120+1.1.1.35|KEGG: 00280+4.2.1.17+1.1.1.35|KEGG: 00281+4.2.1.17+1.1.1.35|KEGG: 00310+4.2.1.17+1.1.1.35|KEGG: 00360+4.2.1.17|KEGG: 00362+4.2.1.17+1.1.1.35|KEGG: 00380+4.2.1.17+1.1.1.35|KEGG: 00410+4.2.1.17|KEGG: 00592+4.2.1.17|KEGG: 00623+1.1.1.35|KEGG: 00627+4.2.1.17|KEGG: 00640+4.2.1.17|KEGG: 00650+4.2.1.17+1.1.1.35|KEGG: 00720+4.2.1.17+1.1.1.35|KEGG: 00903+4.2.1.17|KEGG: 00930+4.2.1.17+1.1.1.35|MetaCyc: PWY-1361|MetaCyc: PWY-5109|MetaCyc: PWY-5136|MetaCyc: PWY-5138|MetaCyc: PWY-5177|MetaCyc: PWY-5789|MetaCyc: PWY-6435|MetaCyc: PWY-6583|MetaCyc: PWY-6863|MetaCyc: PWY-6883|MetaCyc: PWY-6944|MetaCyc: PWY-6945|MetaCyc: PWY-6946|MetaCyc: PWY-7007|MetaCyc: PWY-7046|MetaCyc: PWY-7094|MetaCyc: PWY-7216|MetaCyc: PWY-735|MetaCyc: PWY-7401|MetaCyc: PWY-7606|MetaCyc: PWY-7654|MetaCyc: PWY-7656|MetaCyc: PWY-7726|MetaCyc: PWY-7778|MetaCyc: PWY-7779 CDA09_17040 5d425e81271c42418795f234be6948f2 694 Pfam PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain 601 685 8.8E-6 T 01-11-2018 IPR006108 3-hydroxyacyl-CoA dehydrogenase, C-terminal GO:0003857|GO:0006631|GO:0016491|GO:0055114 KEGG: 00062+4.2.1.17+1.1.1.35|KEGG: 00071+4.2.1.17+1.1.1.35|KEGG: 00120+1.1.1.35|KEGG: 00280+4.2.1.17+1.1.1.35|KEGG: 00281+4.2.1.17+1.1.1.35|KEGG: 00310+4.2.1.17+1.1.1.35|KEGG: 00360+4.2.1.17|KEGG: 00362+4.2.1.17+1.1.1.35|KEGG: 00380+4.2.1.17+1.1.1.35|KEGG: 00410+4.2.1.17|KEGG: 00592+4.2.1.17|KEGG: 00623+1.1.1.35|KEGG: 00627+4.2.1.17|KEGG: 00640+4.2.1.17|KEGG: 00650+4.2.1.17+1.1.1.35|KEGG: 00720+4.2.1.17+1.1.1.35|KEGG: 00903+4.2.1.17|KEGG: 00930+4.2.1.17+1.1.1.35|MetaCyc: PWY-1361|MetaCyc: PWY-5109|MetaCyc: PWY-5136|MetaCyc: PWY-5138|MetaCyc: PWY-5177|MetaCyc: PWY-5789|MetaCyc: PWY-6435|MetaCyc: PWY-6583|MetaCyc: PWY-6863|MetaCyc: PWY-6883|MetaCyc: PWY-6944|MetaCyc: PWY-6945|MetaCyc: PWY-6946|MetaCyc: PWY-7007|MetaCyc: PWY-7046|MetaCyc: PWY-7094|MetaCyc: PWY-7216|MetaCyc: PWY-735|MetaCyc: PWY-7401|MetaCyc: PWY-7606|MetaCyc: PWY-7654|MetaCyc: PWY-7656|MetaCyc: PWY-7726|MetaCyc: PWY-7778|MetaCyc: PWY-7779 CDA09_17040 5d425e81271c42418795f234be6948f2 694 SUPERFAMILY SSF48179 597 683 1.79E-18 T 01-11-2018 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily GO:0055114 CDA09_15085 a392d6a93cd940980b96109d98bfa9a5 245 TIGRFAM TIGR01490 HAD-SF-IB-hyp1: HAD hydrolase, family IB 6 208 1.9E-35 T 01-11-2018 IPR006385 HAD-superfamily hydrolase, subfamily IB, SerB1-like CDA09_15085 a392d6a93cd940980b96109d98bfa9a5 245 Gene3D G3DSA:1.20.1440.100 17 95 5.9E-58 T 01-11-2018 CDA09_15085 a392d6a93cd940980b96109d98bfa9a5 245 TIGRFAM TIGR01488 HAD-SF-IB: HAD phosphoserine phosphatase-like hydrolase, family IB 5 198 4.1E-19 T 01-11-2018 CDA09_15085 a392d6a93cd940980b96109d98bfa9a5 245 ProSitePatterns PS01228 Hypothetical cof family signature 1. 5 16 - T 01-11-2018 CDA09_15085 a392d6a93cd940980b96109d98bfa9a5 245 SUPERFAMILY SSF56784 2 204 3.66E-27 T 01-11-2018 IPR036412 HAD-like superfamily CDA09_15085 a392d6a93cd940980b96109d98bfa9a5 245 Pfam PF12710 haloacid dehalogenase-like hydrolase 6 195 6.2E-28 T 01-11-2018 CDA09_15085 a392d6a93cd940980b96109d98bfa9a5 245 Gene3D G3DSA:3.40.50.1000 6 220 5.9E-58 T 01-11-2018 IPR023214 HAD superfamily CDA09_02905 009f878b58e8c7689ac37b434b13226f 332 TIGRFAM TIGR02823 oxido_YhdH: putative quinone oxidoreductase, YhdH/YhfP family 6 330 2.9E-139 T 01-11-2018 IPR014188 Acrylyl-CoA reductase AcuI CDA09_02905 009f878b58e8c7689ac37b434b13226f 332 SMART SM00829 20 328 7.9E-7 T 01-11-2018 IPR020843 Polyketide synthase, enoylreductase domain GO:0016491 CDA09_02905 009f878b58e8c7689ac37b434b13226f 332 Gene3D G3DSA:3.90.180.10 21 329 4.7E-120 T 01-11-2018 CDA09_02905 009f878b58e8c7689ac37b434b13226f 332 SUPERFAMILY SSF51735 120 296 1.96E-34 T 01-11-2018 IPR036291 NAD(P)-binding domain superfamily CDA09_02905 009f878b58e8c7689ac37b434b13226f 332 Pfam PF08240 Alcohol dehydrogenase GroES-like domain 33 90 6.7E-6 T 01-11-2018 IPR013154 Alcohol dehydrogenase, N-terminal GO:0055114 CDA09_02905 009f878b58e8c7689ac37b434b13226f 332 Pfam PF00107 Zinc-binding dehydrogenase 163 277 4.9E-10 T 01-11-2018 IPR013149 Alcohol dehydrogenase, C-terminal GO:0055114 CDA09_02905 009f878b58e8c7689ac37b434b13226f 332 SUPERFAMILY SSF50129 5 147 1.38E-42 T 01-11-2018 IPR011032 GroES-like superfamily CDA09_02905 009f878b58e8c7689ac37b434b13226f 332 Gene3D G3DSA:3.40.50.720 130 298 4.7E-120 T 01-11-2018 CDA09_22855 a4178e8bf5ea45f8c56371a94f7aa99a 223 Gene3D G3DSA:2.40.33.20 2 220 4.9E-72 T 01-11-2018 CDA09_22855 a4178e8bf5ea45f8c56371a94f7aa99a 223 SUPERFAMILY SSF50800 3 214 3.03E-63 T 01-11-2018 IPR011037 Pyruvate kinase-like, insert domain superfamily CDA09_22855 a4178e8bf5ea45f8c56371a94f7aa99a 223 Pfam PF03473 MOSC domain 48 162 7.4E-23 T 01-11-2018 IPR005302 Molybdenum cofactor sulfurase, C-terminal GO:0003824|GO:0030151|GO:0030170 CDA09_02315 46fc7d7a0026593e9b73f39b3ad3c303 193 Pfam PF02627 Carboxymuconolactone decarboxylase family 46 133 3.3E-16 T 01-11-2018 IPR003779 Carboxymuconolactone decarboxylase-like GO:0051920|GO:0055114 KEGG: 00480+1.11.1.15 CDA09_02315 46fc7d7a0026593e9b73f39b3ad3c303 193 SUPERFAMILY SSF69118 6 191 5.5E-56 T 01-11-2018 IPR029032 AhpD-like Reactome: R-HSA-5628897 CDA09_02315 46fc7d7a0026593e9b73f39b3ad3c303 193 TIGRFAM TIGR00778 ahpD_dom: alkylhydroperoxidase AhpD family core domain 65 112 1.3E-12 T 01-11-2018 IPR004675 Alkylhydroperoxidase AhpD core GO:0051920|GO:0055114 KEGG: 00480+1.11.1.15 CDA09_02315 46fc7d7a0026593e9b73f39b3ad3c303 193 TIGRFAM TIGR01926 peroxid_rel: uncharacterized peroxidase-related enzyme 7 183 6.3E-66 T 01-11-2018 IPR010195 Uncharacterised peroxidase-related CDA09_02315 46fc7d7a0026593e9b73f39b3ad3c303 193 Gene3D G3DSA:1.20.5.810 13 65 1.3E-25 T 01-11-2018 CDA09_02315 46fc7d7a0026593e9b73f39b3ad3c303 193 Gene3D G3DSA:1.20.1290.10 66 189 9.0E-40 T 01-11-2018 IPR029032 AhpD-like Reactome: R-HSA-5628897 CDA09_20535 b8658a18665c53c84401c3258abcd19e 428 ProSitePatterns PS00737 Thiolases signature 2. 374 390 - T 01-11-2018 IPR020613 Thiolase, conserved site GO:0016747 CDA09_20535 b8658a18665c53c84401c3258abcd19e 428 Pfam PF00108 Thiolase, N-terminal domain 5 280 3.1E-57 T 01-11-2018 IPR020616 Thiolase, N-terminal GO:0016747 CDA09_20535 b8658a18665c53c84401c3258abcd19e 428 TIGRFAM TIGR01930 AcCoA-C-Actrans: acetyl-CoA C-acyltransferase 7 426 5.3E-126 T 01-11-2018 IPR002155 Thiolase GO:0016747 CDA09_20535 b8658a18665c53c84401c3258abcd19e 428 ProSitePatterns PS00099 Thiolases active site. 409 422 - T 01-11-2018 IPR020610 Thiolase, active site GO:0016747 CDA09_20535 b8658a18665c53c84401c3258abcd19e 428 SUPERFAMILY SSF53901 289 426 7.58E-39 T 01-11-2018 IPR016039 Thiolase-like GO:0003824 CDA09_20535 b8658a18665c53c84401c3258abcd19e 428 Pfam PF02803 Thiolase, C-terminal domain 289 426 1.8E-40 T 01-11-2018 IPR020617 Thiolase, C-terminal GO:0016747 CDA09_20535 b8658a18665c53c84401c3258abcd19e 428 SUPERFAMILY SSF53901 4 288 2.03E-65 T 01-11-2018 IPR016039 Thiolase-like GO:0003824 CDA09_20535 b8658a18665c53c84401c3258abcd19e 428 PIRSF PIRSF000429 1 428 1.1E-127 T 01-11-2018 IPR002155 Thiolase GO:0016747 CDA09_12820 06666879774ea7c3f20078550d3a1083 271 Gene3D G3DSA:3.40.390.10 147 264 8.7E-39 T 01-11-2018 IPR024079 Metallopeptidase, catalytic domain superfamily GO:0008237 CDA09_12820 06666879774ea7c3f20078550d3a1083 271 SUPERFAMILY SSF55486 42 249 1.03E-40 T 01-11-2018 CDA09_12820 06666879774ea7c3f20078550d3a1083 271 Gene3D G3DSA:1.10.472.150 24 146 2.1E-43 T 01-11-2018 CDA09_12820 06666879774ea7c3f20078550d3a1083 271 Pfam PF06167 Glucose-regulated metallo-peptidase M90 9 247 1.6E-91 T 01-11-2018 IPR010384 MtfA family CDA09_12540 13da0b0eb152dea0fa415afd1a78e1a1 227 Pfam PF04654 Protein of unknown function, DUF599 10 217 3.4E-57 T 01-11-2018 IPR006747 Protein of unknown function DUF599 CDA09_22280 95b6a0d365601ac78cebba0ac2c4af86 223 SUPERFAMILY SSF161098 6 217 7.06E-46 T 01-11-2018 IPR035906 MetI-like superfamily CDA09_22280 95b6a0d365601ac78cebba0ac2c4af86 223 TIGRFAM TIGR02141 modB_ABC: molybdate ABC transporter, permease protein 12 217 2.4E-71 T 01-11-2018 IPR011867 Molybdate ABC transporter, permease protein GO:0015098|GO:0015689|GO:0016021 CDA09_22280 95b6a0d365601ac78cebba0ac2c4af86 223 Gene3D G3DSA:1.10.3720.10 2 221 2.3E-53 T 01-11-2018 IPR035906 MetI-like superfamily CDA09_22280 95b6a0d365601ac78cebba0ac2c4af86 223 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 28 213 1.3E-15 T 01-11-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 CDA09_21760 3cb28782577926e02a9bd9780849e333 614 SUPERFAMILY SSF52922 510 611 2.04E-16 T 01-11-2018 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II GO:0003824 CDA09_21760 3cb28782577926e02a9bd9780849e333 614 Gene3D G3DSA:3.40.920.10 15 222 3.7E-14 T 01-11-2018 IPR002869 Pyruvate-flavodoxin oxidoreductase, central domain GO:0016491|GO:0055114 CDA09_21760 3cb28782577926e02a9bd9780849e333 614 Gene3D G3DSA:3.40.50.920 506 613 6.5E-21 T 01-11-2018 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II GO:0003824 CDA09_21760 3cb28782577926e02a9bd9780849e333 614 Pfam PF01855 Pyruvate flavodoxin/ferredoxin oxidoreductase, thiamine diP-bdg 265 471 9.2E-54 T 01-11-2018 IPR002880 Pyruvate flavodoxin/ferredoxin oxidoreductase, N-terminal GO:0016491|GO:0055114 CDA09_21760 3cb28782577926e02a9bd9780849e333 614 Pfam PF01558 Pyruvate ferredoxin/flavodoxin oxidoreductase 26 215 2.0E-27 T 01-11-2018 IPR019752 Pyruvate/ketoisovalerate oxidoreductase, catalytic domain GO:0016903|GO:0055114 CDA09_21760 3cb28782577926e02a9bd9780849e333 614 TIGRFAM TIGR03710 OAFO_sf: 2-oxoacid:acceptor oxidoreductase, alpha subunit 18 610 1.0E-196 T 01-11-2018 IPR022367 2-oxoacid:acceptor oxidoreductase, alpha subunit KEGG: 00020+1.2.7.3|KEGG: 00720+1.2.7.3|MetaCyc: PWY-5392|MetaCyc: PWY-6969 CDA09_21760 3cb28782577926e02a9bd9780849e333 614 Gene3D G3DSA:3.40.50.970 225 431 6.3E-62 T 01-11-2018 CDA09_21760 3cb28782577926e02a9bd9780849e333 614 SUPERFAMILY SSF52518 241 499 1.52E-61 T 01-11-2018 IPR029061 Thiamin diphosphate-binding fold CDA09_21760 3cb28782577926e02a9bd9780849e333 614 SUPERFAMILY SSF53323 20 223 6.28E-15 T 01-11-2018 IPR002869 Pyruvate-flavodoxin oxidoreductase, central domain GO:0016491|GO:0055114 CDA09_12985 41e8dd5b089844475fb94a13f8d165eb 231 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 142 153 - T 01-11-2018 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site CDA09_12985 41e8dd5b089844475fb94a13f8d165eb 231 SUPERFAMILY SSF46548 101 228 1.2E-36 T 01-11-2018 IPR009051 Alpha-helical ferredoxin GO:0051536 CDA09_12985 41e8dd5b089844475fb94a13f8d165eb 231 SUPERFAMILY SSF54292 2 100 3.23E-26 T 01-11-2018 IPR036010 2Fe-2S ferredoxin-like superfamily GO:0009055|GO:0051536 CDA09_12985 41e8dd5b089844475fb94a13f8d165eb 231 TIGRFAM TIGR00384 dhsB: succinate dehydrogenase and fumarate reductase iron-sulfur protein 5 223 3.3E-81 T 01-11-2018 IPR004489 Succinate dehydrogenase/fumarate reductase iron-sulphur protein GO:0006099|GO:0016491|GO:0055114 KEGG: 00020+1.3.5.1|KEGG: 00190+1.3.5.1|KEGG: 00650+1.3.5.1|KEGG: 00720+1.3.5.1|MetaCyc: PWY-3781|MetaCyc: PWY-4302|MetaCyc: PWY-561|MetaCyc: PWY-5690|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7254|MetaCyc: PWY-7279|Reactome: R-HSA-611105|Reactome: R-HSA-71403 CDA09_12985 41e8dd5b089844475fb94a13f8d165eb 231 Gene3D G3DSA:1.10.1060.10 101 231 2.0E-54 T 01-11-2018 IPR009051 Alpha-helical ferredoxin GO:0051536 CDA09_12985 41e8dd5b089844475fb94a13f8d165eb 231 Pfam PF13085 2Fe-2S iron-sulfur cluster binding domain 3 105 1.3E-31 T 01-11-2018 IPR025192 Succinate dehydogenase/fumarate reductase N-terminal GO:0009055|GO:0051536 KEGG: 00020+1.3.5.1|KEGG: 00190+1.3.5.1|KEGG: 00650+1.3.5.1|KEGG: 00720+1.3.5.1|MetaCyc: PWY-3781|MetaCyc: PWY-4302|MetaCyc: PWY-561|MetaCyc: PWY-5690|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7254|MetaCyc: PWY-7279|Reactome: R-HSA-611105|Reactome: R-HSA-71403 CDA09_12985 41e8dd5b089844475fb94a13f8d165eb 231 Pfam PF13534 4Fe-4S dicluster domain 141 213 4.1E-8 T 01-11-2018 CDA09_12985 41e8dd5b089844475fb94a13f8d165eb 231 Gene3D G3DSA:3.10.20.30 1 100 3.3E-33 T 01-11-2018 IPR012675 Beta-grasp domain superfamily CDA09_04825 3b06e95dcb8a8368597ac63484a7d481 572 ProSitePatterns PS00456 Sodium:solute symporter family signature 1. 183 208 - T 01-11-2018 IPR018212 Sodium/solute symporter, conserved site CDA09_04825 3b06e95dcb8a8368597ac63484a7d481 572 Pfam PF00474 Sodium:solute symporter family 68 489 4.5E-114 T 01-11-2018 IPR001734 Sodium/solute symporter GO:0016020|GO:0022857|GO:0055085 CDA09_04825 3b06e95dcb8a8368597ac63484a7d481 572 Gene3D G3DSA:1.20.1730.10 56 552 4.5E-58 T 01-11-2018 IPR038377 Sodium/glucose symporter superfamily CDA09_04825 3b06e95dcb8a8368597ac63484a7d481 572 TIGRFAM TIGR00813 sss: transporter, solute:sodium symporter (SSS) family 68 489 2.2E-58 T 01-11-2018 IPR001734 Sodium/solute symporter GO:0016020|GO:0022857|GO:0055085 CDA09_18945 443bd5a2f6b394f8e029a1d243621a64 158 PIRSF PIRSF002560 1 157 2.0E-74 T 01-11-2018 IPR002024 Bacterioferritin GO:0006826|GO:0006879|GO:0008199 CDA09_18945 443bd5a2f6b394f8e029a1d243621a64 158 TIGRFAM TIGR00754 bfr: bacterioferritin 1 155 2.7E-77 T 01-11-2018 IPR002024 Bacterioferritin GO:0006826|GO:0006879|GO:0008199 CDA09_18945 443bd5a2f6b394f8e029a1d243621a64 158 ProSitePatterns PS00549 Bacterioferritin signature. 1 19 - T 01-11-2018 IPR002024 Bacterioferritin GO:0006826|GO:0006879|GO:0008199 CDA09_18945 443bd5a2f6b394f8e029a1d243621a64 158 Pfam PF00210 Ferritin-like domain 9 143 7.0E-37 T 01-11-2018 IPR008331 Ferritin/DPS protein domain GO:0006879|GO:0008199 CDA09_18945 443bd5a2f6b394f8e029a1d243621a64 158 SUPERFAMILY SSF47240 1 155 1.98E-54 T 01-11-2018 IPR009078 Ferritin-like superfamily CDA09_18945 443bd5a2f6b394f8e029a1d243621a64 158 Gene3D G3DSA:1.20.1260.10 1 157 2.0E-69 T 01-11-2018 IPR012347 Ferritin-like CDA09_18945 443bd5a2f6b394f8e029a1d243621a64 158 PRINTS PR00601 Bacterioferritin signature 3 22 1.8E-70 T 01-11-2018 IPR002024 Bacterioferritin GO:0006826|GO:0006879|GO:0008199 CDA09_18945 443bd5a2f6b394f8e029a1d243621a64 158 PRINTS PR00601 Bacterioferritin signature 23 43 1.8E-70 T 01-11-2018 IPR002024 Bacterioferritin GO:0006826|GO:0006879|GO:0008199 CDA09_18945 443bd5a2f6b394f8e029a1d243621a64 158 PRINTS PR00601 Bacterioferritin signature 86 106 1.8E-70 T 01-11-2018 IPR002024 Bacterioferritin GO:0006826|GO:0006879|GO:0008199 CDA09_18945 443bd5a2f6b394f8e029a1d243621a64 158 PRINTS PR00601 Bacterioferritin signature 65 85 1.8E-70 T 01-11-2018 IPR002024 Bacterioferritin GO:0006826|GO:0006879|GO:0008199 CDA09_18945 443bd5a2f6b394f8e029a1d243621a64 158 PRINTS PR00601 Bacterioferritin signature 44 64 1.8E-70 T 01-11-2018 IPR002024 Bacterioferritin GO:0006826|GO:0006879|GO:0008199 CDA09_18945 443bd5a2f6b394f8e029a1d243621a64 158 PRINTS PR00601 Bacterioferritin signature 128 149 1.8E-70 T 01-11-2018 IPR002024 Bacterioferritin GO:0006826|GO:0006879|GO:0008199 CDA09_18945 443bd5a2f6b394f8e029a1d243621a64 158 PRINTS PR00601 Bacterioferritin signature 107 127 1.8E-70 T 01-11-2018 IPR002024 Bacterioferritin GO:0006826|GO:0006879|GO:0008199 CDA09_11980 d759497ec3436aa4beb2a56dfe592a9e 379 SUPERFAMILY SSF46626 32 184 1.88E-37 T 01-11-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 CDA09_11980 d759497ec3436aa4beb2a56dfe592a9e 379 SUPERFAMILY SSF46626 188 354 4.71E-32 T 01-11-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 CDA09_11980 d759497ec3436aa4beb2a56dfe592a9e 379 PIRSF PIRSF000294 2 379 4.4E-76 T 01-11-2018 IPR026259 Di-c-type haem protein, MauG/cytochrome c peroxidase GO:0016491|GO:0020037|GO:0055114 CDA09_11980 d759497ec3436aa4beb2a56dfe592a9e 379 Pfam PF03150 Di-haem cytochrome c peroxidase 50 199 3.4E-36 T 01-11-2018 IPR004852 Di-haem cytochrome c peroxidase GO:0016491|GO:0055114 CDA09_11980 d759497ec3436aa4beb2a56dfe592a9e 379 Gene3D G3DSA:1.10.760.10 46 183 1.9E-80 T 01-11-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 CDA09_11980 d759497ec3436aa4beb2a56dfe592a9e 379 Gene3D G3DSA:1.10.760.10 184 356 1.9E-80 T 01-11-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 CDA09_17020 de1bceaa61deeeb4e13714b10e7698cf 399 SUPERFAMILY SSF56645 10 251 6.68E-66 T 01-11-2018 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain superfamily GO:0016627|GO:0055114 CDA09_17020 de1bceaa61deeeb4e13714b10e7698cf 399 Pfam PF02770 Acyl-CoA dehydrogenase, middle domain 129 211 1.6E-17 T 01-11-2018 IPR006091 Acyl-CoA oxidase/dehydrogenase, central domain GO:0016627|GO:0055114 CDA09_17020 de1bceaa61deeeb4e13714b10e7698cf 399 Gene3D G3DSA:2.40.110.10 128 241 6.7E-34 T 01-11-2018 CDA09_17020 de1bceaa61deeeb4e13714b10e7698cf 399 Gene3D G3DSA:1.10.540.10 7 122 2.5E-24 T 01-11-2018 IPR037069 Acyl-CoA dehydrogenase/oxidase, N-terminal domain superfamily GO:0016627|GO:0050660|GO:0055114 CDA09_17020 de1bceaa61deeeb4e13714b10e7698cf 399 SUPERFAMILY SSF47203 238 399 1.39E-20 T 01-11-2018 IPR036250 Acyl-CoA dehydrogenase-like, C-terminal GO:0016627|GO:0055114 CDA09_17020 de1bceaa61deeeb4e13714b10e7698cf 399 Gene3D G3DSA:1.20.140.10 242 399 2.4E-31 T 01-11-2018 CDA09_17020 de1bceaa61deeeb4e13714b10e7698cf 399 Pfam PF00441 Acyl-CoA dehydrogenase, C-terminal domain 238 396 1.8E-19 T 01-11-2018 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal GO:0016627|GO:0055114 CDA09_17020 de1bceaa61deeeb4e13714b10e7698cf 399 Pfam PF02771 Acyl-CoA dehydrogenase, N-terminal domain 10 124 3.4E-18 T 01-11-2018 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal GO:0016627|GO:0050660|GO:0055114 CDA09_20435 50ae60106a8eaf8ca280506c1633c970 682 Pfam PF00271 Helicase conserved C-terminal domain 472 577 9.0E-16 T 01-11-2018 IPR001650 Helicase, C-terminal CDA09_20435 50ae60106a8eaf8ca280506c1633c970 682 SUPERFAMILY SSF52540 174 443 3.51E-55 T 01-11-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CDA09_20435 50ae60106a8eaf8ca280506c1633c970 682 Gene3D G3DSA:2.40.50.140 42 134 1.3E-9 T 01-11-2018 CDA09_20435 50ae60106a8eaf8ca280506c1633c970 682 SMART SM00490 495 578 4.3E-20 T 01-11-2018 IPR001650 Helicase, C-terminal CDA09_20435 50ae60106a8eaf8ca280506c1633c970 682 Pfam PF00270 DEAD/DEAH box helicase 282 423 2.9E-15 T 01-11-2018 IPR011545 DEAD/DEAH box helicase domain GO:0003676|GO:0005524 CDA09_20435 50ae60106a8eaf8ca280506c1633c970 682 SUPERFAMILY SSF50249 6 164 3.43E-31 T 01-11-2018 IPR012340 Nucleic acid-binding, OB-fold CDA09_20435 50ae60106a8eaf8ca280506c1633c970 682 TIGRFAM TIGR00643 recG: ATP-dependent DNA helicase RecG 24 653 6.7E-212 T 01-11-2018 IPR004609 ATP-dependent DNA helicase RecG GO:0004003|GO:0006281|GO:0006310 CDA09_20435 50ae60106a8eaf8ca280506c1633c970 682 Pfam PF17191 RecG wedge domain 10 163 1.1E-16 T 01-11-2018 IPR033454 RecG, wedge domain CDA09_20435 50ae60106a8eaf8ca280506c1633c970 682 Gene3D G3DSA:3.40.50.300 447 619 1.1E-52 T 01-11-2018 CDA09_20435 50ae60106a8eaf8ca280506c1633c970 682 SUPERFAMILY SSF52540 379 588 3.38E-39 T 01-11-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CDA09_20435 50ae60106a8eaf8ca280506c1633c970 682 SMART SM00487 256 449 6.4E-28 T 01-11-2018 IPR014001 Helicase superfamily 1/2, ATP-binding domain CDA09_20435 50ae60106a8eaf8ca280506c1633c970 682 Gene3D G3DSA:3.40.50.300 203 439 6.9E-82 T 01-11-2018 CDA09_16030 38bc6eb4b62c9cd5511d7f1b6830f3a8 572 SUPERFAMILY SSF52540 339 559 4.05E-58 T 01-11-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CDA09_16030 38bc6eb4b62c9cd5511d7f1b6830f3a8 572 SUPERFAMILY SSF90123 18 328 1.44E-61 T 01-11-2018 IPR036640 ABC transporter type 1, transmembrane domain superfamily GO:0005524|GO:0016021 CDA09_16030 38bc6eb4b62c9cd5511d7f1b6830f3a8 572 SMART SM00382 371 555 7.2E-14 T 01-11-2018 IPR003593 AAA+ ATPase domain CDA09_16030 38bc6eb4b62c9cd5511d7f1b6830f3a8 572 Pfam PF00664 ABC transporter transmembrane region 32 294 1.7E-31 T 01-11-2018 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0016021|GO:0042626|GO:0055085 CDA09_16030 38bc6eb4b62c9cd5511d7f1b6830f3a8 572 Gene3D G3DSA:1.20.1560.10 5 333 5.0E-66 T 01-11-2018 IPR036640 ABC transporter type 1, transmembrane domain superfamily GO:0005524|GO:0016021 CDA09_16030 38bc6eb4b62c9cd5511d7f1b6830f3a8 572 Pfam PF00005 ABC transporter 362 509 1.7E-28 T 01-11-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 CDA09_16030 38bc6eb4b62c9cd5511d7f1b6830f3a8 572 Gene3D G3DSA:3.40.50.300 339 566 5.6E-63 T 01-11-2018 CDA09_02290 9a85024ffda66dadec140ecbd52de2e9 61 Pfam PF06945 Protein of unknown function (DUF1289) 6 29 2.9E-8 T 01-11-2018 IPR010710 Protein of unknown function DUF1289 CDA09_01515 66b0b9bbbb744aae86d3201d3b91db2c 587 Pfam PF13641 Glycosyltransferase like family 2 9 201 6.8E-9 T 01-11-2018 CDA09_01515 66b0b9bbbb744aae86d3201d3b91db2c 587 Gene3D G3DSA:3.90.550.10 3 205 1.8E-24 T 01-11-2018 IPR029044 Nucleotide-diphospho-sugar transferases CDA09_01515 66b0b9bbbb744aae86d3201d3b91db2c 587 SUPERFAMILY SSF53448 8 252 2.6E-28 T 01-11-2018 IPR029044 Nucleotide-diphospho-sugar transferases CDA09_01515 66b0b9bbbb744aae86d3201d3b91db2c 587 Pfam PF00535 Glycosyl transferase family 2 314 425 3.2E-18 T 01-11-2018 IPR001173 Glycosyltransferase 2-like Reactome: R-HSA-913709 CDA09_01515 66b0b9bbbb744aae86d3201d3b91db2c 587 SUPERFAMILY SSF53448 311 525 6.54E-38 T 01-11-2018 IPR029044 Nucleotide-diphospho-sugar transferases CDA09_01515 66b0b9bbbb744aae86d3201d3b91db2c 587 Gene3D G3DSA:3.90.550.10 256 539 3.1E-41 T 01-11-2018 IPR029044 Nucleotide-diphospho-sugar transferases CDA09_07670 5d0647176f8c0090c3baa70969e8c26b 702 Pfam PF13426 PAS domain 352 458 8.5E-13 T 01-11-2018 IPR000014 PAS domain CDA09_07670 5d0647176f8c0090c3baa70969e8c26b 702 Gene3D G3DSA:3.30.450.20 338 461 1.2E-28 T 01-11-2018 CDA09_07670 5d0647176f8c0090c3baa70969e8c26b 702 Gene3D G3DSA:3.40.50.2300 1 136 1.5E-29 T 01-11-2018 CDA09_07670 5d0647176f8c0090c3baa70969e8c26b 702 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 340 466 1.1E-24 T 01-11-2018 IPR000014 PAS domain CDA09_07670 5d0647176f8c0090c3baa70969e8c26b 702 SUPERFAMILY SSF55874 556 686 2.36E-17 T 01-11-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily CDA09_07670 5d0647176f8c0090c3baa70969e8c26b 702 SUPERFAMILY SSF55781 161 331 1.46E-21 T 01-11-2018 CDA09_07670 5d0647176f8c0090c3baa70969e8c26b 702 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 593 686 3.9E-8 T 01-11-2018 IPR003594 Histidine kinase/HSP90-like ATPase CDA09_07670 5d0647176f8c0090c3baa70969e8c26b 702 Gene3D G3DSA:3.30.450.40 173 322 3.0E-25 T 01-11-2018 IPR029016 GAF-like domain superfamily CDA09_07670 5d0647176f8c0090c3baa70969e8c26b 702 Pfam PF13185 GAF domain 176 310 1.7E-13 T 01-11-2018 IPR003018 GAF domain GO:0005515 CDA09_07670 5d0647176f8c0090c3baa70969e8c26b 702 Gene3D G3DSA:3.30.565.10 561 686 9.5E-30 T 01-11-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily CDA09_07670 5d0647176f8c0090c3baa70969e8c26b 702 SMART SM00387 590 688 1.5E-7 T 01-11-2018 IPR003594 Histidine kinase/HSP90-like ATPase CDA09_07670 5d0647176f8c0090c3baa70969e8c26b 702 SMART SM00091 342 408 1.1E-10 T 01-11-2018 IPR000014 PAS domain CDA09_07670 5d0647176f8c0090c3baa70969e8c26b 702 SMART SM00448 2 116 1.9E-25 T 01-11-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 CDA09_07670 5d0647176f8c0090c3baa70969e8c26b 702 SUPERFAMILY SSF55785 353 468 3.21E-25 T 01-11-2018 IPR035965 PAS domain superfamily CDA09_07670 5d0647176f8c0090c3baa70969e8c26b 702 SUPERFAMILY SSF52172 2 122 3.56E-31 T 01-11-2018 IPR011006 CheY-like superfamily CDA09_07670 5d0647176f8c0090c3baa70969e8c26b 702 Pfam PF00072 Response regulator receiver domain 4 116 2.7E-21 T 01-11-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 CDA09_07670 5d0647176f8c0090c3baa70969e8c26b 702 Pfam PF07730 Histidine kinase 487 552 7.4E-15 T 01-11-2018 IPR011712 Signal transduction histidine kinase, subgroup 3, dimerisation and phosphoacceptor domain GO:0000155|GO:0000160|GO:0016021|GO:0046983 CDA09_07670 5d0647176f8c0090c3baa70969e8c26b 702 SMART SM00065 173 324 0.0013 T 01-11-2018 IPR003018 GAF domain GO:0005515 CDA09_21765 5d5562a2e16e12d396902cf39d12ea04 79 Gene3D G3DSA:3.30.70.20 2 79 1.2E-30 T 01-11-2018 CDA09_21765 5d5562a2e16e12d396902cf39d12ea04 79 Pfam PF00037 4Fe-4S binding domain 5 25 3.1E-7 T 01-11-2018 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain CDA09_21765 5d5562a2e16e12d396902cf39d12ea04 79 SUPERFAMILY SSF54862 5 68 1.65E-18 T 01-11-2018 CDA09_21765 5d5562a2e16e12d396902cf39d12ea04 79 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 9 20 - T 01-11-2018 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site CDA09_05275 78698fa4ec65b55b6999a86e2a415fcb 87 TIGRFAM TIGR02181 GRX_bact: glutaredoxin 3 5 84 1.0E-34 T 01-11-2018 IPR011900 Glutaredoxin, GrxC GO:0045454 CDA09_05275 78698fa4ec65b55b6999a86e2a415fcb 87 PRINTS PR00160 Glutaredoxin signature 5 23 1.5E-16 T 01-11-2018 IPR014025 Glutaredoxin subgroup CDA09_05275 78698fa4ec65b55b6999a86e2a415fcb 87 PRINTS PR00160 Glutaredoxin signature 62 75 1.5E-16 T 01-11-2018 IPR014025 Glutaredoxin subgroup CDA09_05275 78698fa4ec65b55b6999a86e2a415fcb 87 PRINTS PR00160 Glutaredoxin signature 48 61 1.5E-16 T 01-11-2018 IPR014025 Glutaredoxin subgroup CDA09_05275 78698fa4ec65b55b6999a86e2a415fcb 87 ProSitePatterns PS00195 Glutaredoxin active site. 7 23 - T 01-11-2018 IPR011767 Glutaredoxin active site GO:0009055|GO:0045454 Reactome: R-HSA-499943 CDA09_05275 78698fa4ec65b55b6999a86e2a415fcb 87 SUPERFAMILY SSF52833 3 86 5.19E-27 T 01-11-2018 IPR036249 Thioredoxin-like superfamily CDA09_05275 78698fa4ec65b55b6999a86e2a415fcb 87 Pfam PF00462 Glutaredoxin 7 65 1.9E-19 T 01-11-2018 IPR002109 Glutaredoxin GO:0009055|GO:0015035|GO:0045454 CDA09_05275 78698fa4ec65b55b6999a86e2a415fcb 87 Gene3D G3DSA:3.40.30.10 1 87 3.1E-26 T 01-11-2018 CDA09_06725 eea0038a5a464519f63de7ed1a2ff921 419 TIGRFAM TIGR03506 FlgEFG_subfam: flagellar hook-basal body protein 1 401 4.3E-103 T 01-11-2018 IPR020013 Flagellar hook-basal body protein, FlgE/F/G CDA09_06725 eea0038a5a464519f63de7ed1a2ff921 419 Pfam PF00460 Flagella basal body rod protein 3 33 2.7E-10 T 01-11-2018 IPR001444 Flagellar basal body rod protein, N-terminal GO:0071973 CDA09_06725 eea0038a5a464519f63de7ed1a2ff921 419 Pfam PF07559 Flagellar basal body protein FlaE 192 300 2.5E-21 T 01-11-2018 IPR011491 Flagellar hook protein FlgE CDA09_06725 eea0038a5a464519f63de7ed1a2ff921 419 Gene3D G3DSA:2.60.98.20 152 301 2.6E-29 T 01-11-2018 IPR037058 Flagellar hook protein FlgE superfamily CDA09_06725 eea0038a5a464519f63de7ed1a2ff921 419 ProSitePatterns PS00588 Flagella basal body rod proteins signature. 9 29 - T 01-11-2018 IPR019776 Flagellar basal body rod protein, conserved site CDA09_06725 eea0038a5a464519f63de7ed1a2ff921 419 SUPERFAMILY SSF117143 80 378 1.31E-74 T 01-11-2018 IPR037925 Flagellar hook-basal body protein, FlgE/F/G-like CDA09_06725 eea0038a5a464519f63de7ed1a2ff921 419 Pfam PF06429 Flagellar basal body rod FlgEFG protein C-terminal 340 418 2.1E-17 T 01-11-2018 IPR010930 Flagellar basal-body/hook protein, C-terminal domain CDA09_05485 9e82d532abc89da779e8b3bf3e3716c8 121 Gene3D G3DSA:2.40.10.220 1 110 2.6E-5 T 01-11-2018 CDA09_05485 9e82d532abc89da779e8b3bf3e3716c8 121 Pfam PF07238 PilZ domain 3 100 2.5E-7 T 01-11-2018 IPR009875 PilZ domain GO:0035438 CDA09_05485 9e82d532abc89da779e8b3bf3e3716c8 121 SUPERFAMILY SSF141371 1 95 1.53E-5 T 01-11-2018 CDA09_08670 655ae995aa245efe003356af661bc6c1 242 PIRSF PIRSF015736 1 242 1.2E-64 T 01-11-2018 IPR026286 Maleate isomerase/Arylmalonate decarboxylase CDA09_08670 655ae995aa245efe003356af661bc6c1 242 Pfam PF01177 Asp/Glu/Hydantoin racemase 7 219 1.7E-9 T 01-11-2018 IPR015942 Asp/Glu/hydantoin racemase GO:0006807|GO:0036361 KEGG: 00471+5.1.1.3|MetaCyc: PWY-6386|MetaCyc: PWY-6387 CDA09_08670 655ae995aa245efe003356af661bc6c1 242 Gene3D G3DSA:3.40.50.12500 4 241 2.2E-60 T 01-11-2018 CDA09_07990 daae120921ca252800fc44816494909c 270 Pfam PF01061 ABC-2 type transporter 10 229 5.3E-34 T 01-11-2018 IPR013525 ABC-2 type transporter GO:0016020 Reactome: R-HSA-1369062 CDA09_07990 daae120921ca252800fc44816494909c 270 TIGRFAM TIGR03861 phenyl_ABC_PedC: alcohol ABC transporter, permease protein 7 260 7.4E-112 T 01-11-2018 IPR022403 Alcohol ABC transporter, permease protein CDA09_07990 daae120921ca252800fc44816494909c 270 PRINTS PR00164 ABC-2 type transport system membrane protein signature 28 49 4.1E-9 T 01-11-2018 IPR000412 ABC-2 transporter GO:0016021|GO:0043190|GO:0055085 CDA09_07990 daae120921ca252800fc44816494909c 270 PRINTS PR00164 ABC-2 type transport system membrane protein signature 145 169 4.1E-9 T 01-11-2018 IPR000412 ABC-2 transporter GO:0016021|GO:0043190|GO:0055085 CDA09_07990 daae120921ca252800fc44816494909c 270 PRINTS PR00164 ABC-2 type transport system membrane protein signature 182 201 4.1E-9 T 01-11-2018 IPR000412 ABC-2 transporter GO:0016021|GO:0043190|GO:0055085 CDA09_07990 daae120921ca252800fc44816494909c 270 PIRSF PIRSF006648 2 259 4.5E-40 T 01-11-2018 IPR000412 ABC-2 transporter GO:0016021|GO:0043190|GO:0055085 CDA09_00015 f60762fac4f9a79d9f91f0f939f65570 368 SUPERFAMILY SSF55979 247 368 6.09E-38 T 01-11-2018 CDA09_00015 f60762fac4f9a79d9f91f0f939f65570 368 SUPERFAMILY SSF55979 128 246 4.08E-28 T 01-11-2018 CDA09_00015 f60762fac4f9a79d9f91f0f939f65570 368 PIRSF PIRSF000804 2 368 2.6E-115 T 01-11-2018 IPR001001 DNA polymerase III, beta sliding clamp GO:0003677|GO:0006260|GO:0009360 CDA09_00015 f60762fac4f9a79d9f91f0f939f65570 368 TIGRFAM TIGR00663 dnan: DNA polymerase III, beta subunit 4 367 6.3E-96 T 01-11-2018 IPR001001 DNA polymerase III, beta sliding clamp GO:0003677|GO:0006260|GO:0009360 CDA09_00015 f60762fac4f9a79d9f91f0f939f65570 368 Pfam PF00712 DNA polymerase III beta subunit, N-terminal domain 4 120 5.5E-31 T 01-11-2018 IPR022634 DNA polymerase III, beta sliding clamp, N-terminal GO:0003677|GO:0003887|GO:0006260|GO:0008408|GO:0009360 CDA09_00015 f60762fac4f9a79d9f91f0f939f65570 368 Pfam PF02767 DNA polymerase III beta subunit, central domain 131 245 4.4E-30 T 01-11-2018 IPR022637 DNA polymerase III, beta sliding clamp, central GO:0003887|GO:0006260|GO:0008408|GO:0009360 CDA09_00015 f60762fac4f9a79d9f91f0f939f65570 368 Gene3D G3DSA:3.10.150.10 125 250 6.8E-38 T 01-11-2018 CDA09_00015 f60762fac4f9a79d9f91f0f939f65570 368 SUPERFAMILY SSF55979 4 120 4.91E-26 T 01-11-2018 CDA09_00015 f60762fac4f9a79d9f91f0f939f65570 368 Pfam PF02768 DNA polymerase III beta subunit, C-terminal domain 248 367 5.4E-37 T 01-11-2018 IPR022635 DNA polymerase III, beta sliding clamp, C-terminal GO:0003677|GO:0003887|GO:0006260|GO:0008408|GO:0009360 CDA09_00015 f60762fac4f9a79d9f91f0f939f65570 368 SMART SM00480 18 364 1.4E-129 T 01-11-2018 IPR001001 DNA polymerase III, beta sliding clamp GO:0003677|GO:0006260|GO:0009360 CDA09_00015 f60762fac4f9a79d9f91f0f939f65570 368 Gene3D G3DSA:3.10.150.10 2 123 3.3E-37 T 01-11-2018 CDA09_00015 f60762fac4f9a79d9f91f0f939f65570 368 Gene3D G3DSA:3.10.150.10 251 368 2.6E-38 T 01-11-2018 CDA09_11745 74f488433bd1aba3636e04000aedd325 54 ProSitePatterns PS00202 Rubredoxin signature. 33 43 - T 01-11-2018 IPR018527 Rubredoxin, iron-binding site GO:0046872 CDA09_11745 74f488433bd1aba3636e04000aedd325 54 PRINTS PR00163 Rubredoxin signature 33 49 2.0E-7 T 01-11-2018 IPR024935 Rubredoxin domain GO:0005506 CDA09_11745 74f488433bd1aba3636e04000aedd325 54 PRINTS PR00163 Rubredoxin signature 3 19 2.0E-7 T 01-11-2018 IPR024935 Rubredoxin domain GO:0005506 CDA09_11745 74f488433bd1aba3636e04000aedd325 54 Pfam PF00301 Rubredoxin 3 49 4.9E-19 T 01-11-2018 IPR024935 Rubredoxin domain GO:0005506 CDA09_11745 74f488433bd1aba3636e04000aedd325 54 SUPERFAMILY SSF57802 1 52 4.21E-19 T 01-11-2018 CDA09_11745 74f488433bd1aba3636e04000aedd325 54 Gene3D G3DSA:2.20.28.10 1 54 1.6E-21 T 01-11-2018 CDA09_02370 cf56b5b2f6c3613a09b22b3cec7c0cd9 367 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 116 248 1.1E-39 T 01-11-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 CDA09_02370 cf56b5b2f6c3613a09b22b3cec7c0cd9 367 SMART SM00283 26 287 3.6E-27 T 01-11-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 CDA09_02370 cf56b5b2f6c3613a09b22b3cec7c0cd9 367 Pfam PF13682 Chemoreceptor zinc-binding domain 260 324 1.4E-14 T 01-11-2018 IPR025991 Chemoreceptor zinc-binding domain CDA09_02370 cf56b5b2f6c3613a09b22b3cec7c0cd9 367 Gene3D G3DSA:1.10.287.950 8 276 2.2E-48 T 01-11-2018 CDA09_02370 cf56b5b2f6c3613a09b22b3cec7c0cd9 367 SUPERFAMILY SSF58104 56 278 2.22E-51 T 01-11-2018 CDA09_20605 78be2fee13da226c5bf1d8d47dc8eee0 561 SUPERFAMILY SSF55124 1 126 1.18E-26 T 01-11-2018 IPR036136 Nitrite/Sulfite reductase ferredoxin-like domain superfamily GO:0016491|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683 CDA09_20605 78be2fee13da226c5bf1d8d47dc8eee0 561 Gene3D G3DSA:3.30.413.10 119 318 3.6E-76 T 01-11-2018 CDA09_20605 78be2fee13da226c5bf1d8d47dc8eee0 561 SUPERFAMILY SSF55124 252 421 1.52E-25 T 01-11-2018 IPR036136 Nitrite/Sulfite reductase ferredoxin-like domain superfamily GO:0016491|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683 CDA09_20605 78be2fee13da226c5bf1d8d47dc8eee0 561 SUPERFAMILY SSF56014 120 286 8.77E-47 T 01-11-2018 CDA09_20605 78be2fee13da226c5bf1d8d47dc8eee0 561 Gene3D G3DSA:3.90.480.10 53 389 3.6E-76 T 01-11-2018 CDA09_20605 78be2fee13da226c5bf1d8d47dc8eee0 561 Pfam PF01077 Nitrite and sulphite reductase 4Fe-4S domain 119 274 1.3E-40 T 01-11-2018 IPR006067 Nitrite/sulphite reductase 4Fe-4S domain GO:0016491|GO:0020037|GO:0051536|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683 CDA09_20605 78be2fee13da226c5bf1d8d47dc8eee0 561 Pfam PF01077 Nitrite and sulphite reductase 4Fe-4S domain 411 547 4.7E-14 T 01-11-2018 IPR006067 Nitrite/sulphite reductase 4Fe-4S domain GO:0016491|GO:0020037|GO:0051536|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683 CDA09_20605 78be2fee13da226c5bf1d8d47dc8eee0 561 Gene3D G3DSA:3.30.413.10 408 559 5.0E-37 T 01-11-2018 CDA09_20605 78be2fee13da226c5bf1d8d47dc8eee0 561 Pfam PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain 53 108 1.3E-13 T 01-11-2018 IPR005117 Nitrite/Sulfite reductase ferredoxin-like domain GO:0016491|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683 CDA09_20605 78be2fee13da226c5bf1d8d47dc8eee0 561 Pfam PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain 328 399 7.7E-18 T 01-11-2018 IPR005117 Nitrite/Sulfite reductase ferredoxin-like domain GO:0016491|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683 CDA09_20605 78be2fee13da226c5bf1d8d47dc8eee0 561 SUPERFAMILY SSF56014 407 549 1.27E-43 T 01-11-2018 CDA09_19370 c1b274ef4174873d92920ba6aa78c783 160 SUPERFAMILY SSF50249 3 160 4.46E-63 T 01-11-2018 IPR012340 Nucleic acid-binding, OB-fold CDA09_19370 c1b274ef4174873d92920ba6aa78c783 160 TIGRFAM TIGR00621 ssb: single-stranded DNA-binding protein 2 160 1.9E-58 T 01-11-2018 IPR011344 Single-stranded DNA-binding protein GO:0003697|GO:0006260 Reactome: R-HSA-2151201 CDA09_19370 c1b274ef4174873d92920ba6aa78c783 160 Pfam PF00436 Single-strand binding protein family 4 108 1.8E-44 T 01-11-2018 IPR000424 Primosome PriB/single-strand DNA-binding GO:0003697 Reactome: R-HSA-2151201 CDA09_19370 c1b274ef4174873d92920ba6aa78c783 160 Hamap MF_00984 Single-stranded DNA-binding protein. 4 112 39.41 T 01-11-2018 IPR011344 Single-stranded DNA-binding protein GO:0003697|GO:0006260 Reactome: R-HSA-2151201 CDA09_19370 c1b274ef4174873d92920ba6aa78c783 160 Gene3D G3DSA:2.40.50.140 2 148 2.1E-50 T 01-11-2018 CDA09_17150 8fa35e11751c222f694d7ded40c263e4 419 SUPERFAMILY SSF47203 250 406 2.09E-40 T 01-11-2018 IPR036250 Acyl-CoA dehydrogenase-like, C-terminal GO:0016627|GO:0055114 CDA09_17150 8fa35e11751c222f694d7ded40c263e4 419 Pfam PF02771 Acyl-CoA dehydrogenase, N-terminal domain 11 135 3.6E-12 T 01-11-2018 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal GO:0016627|GO:0050660|GO:0055114 CDA09_17150 8fa35e11751c222f694d7ded40c263e4 419 Gene3D G3DSA:1.20.140.10 253 410 2.0E-36 T 01-11-2018 CDA09_17150 8fa35e11751c222f694d7ded40c263e4 419 Gene3D G3DSA:2.40.110.10 138 252 1.7E-49 T 01-11-2018 CDA09_17150 8fa35e11751c222f694d7ded40c263e4 419 Pfam PF00441 Acyl-CoA dehydrogenase, C-terminal domain 252 400 6.0E-35 T 01-11-2018 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal GO:0016627|GO:0055114 CDA09_17150 8fa35e11751c222f694d7ded40c263e4 419 SUPERFAMILY SSF56645 3 265 6.02E-65 T 01-11-2018 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain superfamily GO:0016627|GO:0055114 CDA09_17150 8fa35e11751c222f694d7ded40c263e4 419 Gene3D G3DSA:1.10.540.10 4 136 3.8E-44 T 01-11-2018 IPR037069 Acyl-CoA dehydrogenase/oxidase, N-terminal domain superfamily GO:0016627|GO:0050660|GO:0055114 CDA09_17150 8fa35e11751c222f694d7ded40c263e4 419 Pfam PF02770 Acyl-CoA dehydrogenase, middle domain 139 234 1.9E-20 T 01-11-2018 IPR006091 Acyl-CoA oxidase/dehydrogenase, central domain GO:0016627|GO:0055114 CDA09_09280 5227c7b494ef8a906bd462bb69b8fa8f 247 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 83 94 2.0E-29 T 01-11-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CDA09_09280 5227c7b494ef8a906bd462bb69b8fa8f 247 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 209 229 2.0E-29 T 01-11-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CDA09_09280 5227c7b494ef8a906bd462bb69b8fa8f 247 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 9 26 2.0E-29 T 01-11-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CDA09_09280 5227c7b494ef8a906bd462bb69b8fa8f 247 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 129 145 2.0E-29 T 01-11-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CDA09_09280 5227c7b494ef8a906bd462bb69b8fa8f 247 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 176 193 2.0E-29 T 01-11-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CDA09_09280 5227c7b494ef8a906bd462bb69b8fa8f 247 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 155 174 2.0E-29 T 01-11-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CDA09_09280 5227c7b494ef8a906bd462bb69b8fa8f 247 Pfam PF00106 short chain dehydrogenase 8 197 4.4E-51 T 01-11-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CDA09_09280 5227c7b494ef8a906bd462bb69b8fa8f 247 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 155 174 3.1E-12 T 01-11-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CDA09_09280 5227c7b494ef8a906bd462bb69b8fa8f 247 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 83 94 3.1E-12 T 01-11-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CDA09_09280 5227c7b494ef8a906bd462bb69b8fa8f 247 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 135 143 3.1E-12 T 01-11-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CDA09_09280 5227c7b494ef8a906bd462bb69b8fa8f 247 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 142 170 - T 01-11-2018 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 CDA09_09280 5227c7b494ef8a906bd462bb69b8fa8f 247 SUPERFAMILY SSF51735 2 242 2.16E-63 T 01-11-2018 IPR036291 NAD(P)-binding domain superfamily CDA09_09280 5227c7b494ef8a906bd462bb69b8fa8f 247 Gene3D G3DSA:3.40.50.720 1 245 1.6E-62 T 01-11-2018 CDA09_09280 5227c7b494ef8a906bd462bb69b8fa8f 247 SMART SM00822 This enzymatic domain is part of bacterial polyketide synthases and catalyses the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain. It uses NADPH to reduce the keto group to a hydroxy group. 8 190 8.8E-4 T 01-11-2018 CDA09_06365 039940b2bb9cbd3e2260657126d8db09 260 Gene3D G3DSA:3.40.50.880 5 259 1.0E-62 T 01-11-2018 IPR029062 Class I glutamine amidotransferase-like CDA09_06365 039940b2bb9cbd3e2260657126d8db09 260 Pfam PF07722 Peptidase C26 24 232 2.9E-51 T 01-11-2018 IPR011697 Peptidase C26 GO:0016787 Reactome: R-HSA-6798695 CDA09_06365 039940b2bb9cbd3e2260657126d8db09 260 SUPERFAMILY SSF52317 31 256 2.81E-38 T 01-11-2018 IPR029062 Class I glutamine amidotransferase-like CDA09_06140 9d7044e100d5a2843b77fe457a2b7547 354 Gene3D G3DSA:3.40.50.720 8 197 1.4E-82 T 01-11-2018 CDA09_06140 9d7044e100d5a2843b77fe457a2b7547 354 PIRSF PIRSF000116 8 220 5.0E-49 T 01-11-2018 IPR014359 Ketol-acid reductoisomerase, prokaryotic GO:0004455|GO:0009082|GO:0050661|GO:0055114 KEGG: 00290+1.1.1.86|KEGG: 00770+1.1.1.86|MetaCyc: PWY-5103|MetaCyc: PWY-7111 CDA09_06140 9d7044e100d5a2843b77fe457a2b7547 354 PIRSF PIRSF000116 217 348 1.6E-13 T 01-11-2018 IPR014359 Ketol-acid reductoisomerase, prokaryotic GO:0004455|GO:0009082|GO:0050661|GO:0055114 KEGG: 00290+1.1.1.86|KEGG: 00770+1.1.1.86|MetaCyc: PWY-5103|MetaCyc: PWY-7111 CDA09_06140 9d7044e100d5a2843b77fe457a2b7547 354 TIGRFAM TIGR00465 ilvC: ketol-acid reductoisomerase 30 342 1.2E-130 T 01-11-2018 IPR013023 Ketol-acid reductoisomerase GO:0009082|GO:0016491|GO:0055114 KEGG: 00290+1.1.1.86|KEGG: 00770+1.1.1.86|MetaCyc: PWY-5103|MetaCyc: PWY-7111 CDA09_06140 9d7044e100d5a2843b77fe457a2b7547 354 SUPERFAMILY SSF48179 199 348 1.58E-67 T 01-11-2018 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily GO:0055114 CDA09_06140 9d7044e100d5a2843b77fe457a2b7547 354 SUPERFAMILY SSF51735 17 198 1.71E-76 T 01-11-2018 IPR036291 NAD(P)-binding domain superfamily CDA09_06140 9d7044e100d5a2843b77fe457a2b7547 354 Gene3D G3DSA:1.10.3730.40 198 354 6.6E-72 T 01-11-2018 CDA09_06140 9d7044e100d5a2843b77fe457a2b7547 354 Pfam PF07991 Acetohydroxy acid isomeroreductase, NADPH-binding domain 30 193 4.8E-75 T 01-11-2018 IPR013116 Ketol-acid reductoisomerase, N-terminal KEGG: 00290+1.1.1.86|KEGG: 00770+1.1.1.86|MetaCyc: PWY-5103|MetaCyc: PWY-7111 CDA09_06140 9d7044e100d5a2843b77fe457a2b7547 354 Hamap MF_00435 Ketol-acid reductoisomerase (NADP(+)) [ilvC]. 17 344 44.806 T 01-11-2018 IPR013023 Ketol-acid reductoisomerase GO:0009082|GO:0016491|GO:0055114 KEGG: 00290+1.1.1.86|KEGG: 00770+1.1.1.86|MetaCyc: PWY-5103|MetaCyc: PWY-7111 CDA09_06140 9d7044e100d5a2843b77fe457a2b7547 354 Pfam PF01450 Acetohydroxy acid isomeroreductase, catalytic domain 199 342 1.8E-61 T 01-11-2018 IPR000506 Ketol-acid reductoisomerase, C-terminal GO:0004455|GO:0009082|GO:0055114 KEGG: 00290+1.1.1.86|KEGG: 00770+1.1.1.86|MetaCyc: PWY-5103|MetaCyc: PWY-7111 CDA09_00165 f24358c9ae378097cf90ab126591115f 327 Hamap MF_00194 Recombination-associated protein RdgC [rdgC]. 1 299 38.233 T 01-11-2018 IPR007476 Putative exonuclease, RdgC GO:0006310 CDA09_00165 f24358c9ae378097cf90ab126591115f 327 Pfam PF04381 Putative exonuclease, RdgC 1 297 3.6E-124 T 01-11-2018 IPR007476 Putative exonuclease, RdgC GO:0006310 CDA09_09510 f72f85d21f3aa1c1786b7148c2c83163 409 Pfam PF00441 Acyl-CoA dehydrogenase, C-terminal domain 236 389 7.9E-26 T 01-11-2018 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal GO:0016627|GO:0055114 CDA09_09510 f72f85d21f3aa1c1786b7148c2c83163 409 Gene3D G3DSA:1.10.540.10 2 125 4.3E-21 T 01-11-2018 IPR037069 Acyl-CoA dehydrogenase/oxidase, N-terminal domain superfamily GO:0016627|GO:0050660|GO:0055114 CDA09_09510 f72f85d21f3aa1c1786b7148c2c83163 409 Gene3D G3DSA:1.20.140.10 240 395 1.2E-31 T 01-11-2018 CDA09_09510 f72f85d21f3aa1c1786b7148c2c83163 409 Pfam PF02771 Acyl-CoA dehydrogenase, N-terminal domain 6 126 5.6E-14 T 01-11-2018 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal GO:0016627|GO:0050660|GO:0055114 CDA09_09510 f72f85d21f3aa1c1786b7148c2c83163 409 Gene3D G3DSA:2.40.110.10 130 239 5.5E-36 T 01-11-2018 CDA09_09510 f72f85d21f3aa1c1786b7148c2c83163 409 SUPERFAMILY SSF47203 236 392 1.01E-21 T 01-11-2018 IPR036250 Acyl-CoA dehydrogenase-like, C-terminal GO:0016627|GO:0055114 CDA09_09510 f72f85d21f3aa1c1786b7148c2c83163 409 Pfam PF02770 Acyl-CoA dehydrogenase, middle domain 130 224 1.9E-20 T 01-11-2018 IPR006091 Acyl-CoA oxidase/dehydrogenase, central domain GO:0016627|GO:0055114 CDA09_09510 f72f85d21f3aa1c1786b7148c2c83163 409 SUPERFAMILY SSF56645 2 248 2.23E-66 T 01-11-2018 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain superfamily GO:0016627|GO:0055114 CDA09_07760 bbcec2420c1a8fcce6f1ede92c88b2c3 1057 SUPERFAMILY SSF55073 621 778 1.33E-50 T 01-11-2018 IPR029787 Nucleotide cyclase CDA09_07760 bbcec2420c1a8fcce6f1ede92c88b2c3 1057 Pfam PF00563 EAL domain 793 1028 2.2E-73 T 01-11-2018 IPR001633 EAL domain CDA09_07760 bbcec2420c1a8fcce6f1ede92c88b2c3 1057 SMART SM00086 441 483 2.9E-7 T 01-11-2018 IPR001610 PAC motif CDA09_07760 bbcec2420c1a8fcce6f1ede92c88b2c3 1057 SMART SM00086 563 605 9.0E-4 T 01-11-2018 IPR001610 PAC motif CDA09_07760 bbcec2420c1a8fcce6f1ede92c88b2c3 1057 Gene3D G3DSA:3.30.450.20 364 493 2.2E-37 T 01-11-2018 CDA09_07760 bbcec2420c1a8fcce6f1ede92c88b2c3 1057 Pfam PF00990 Diguanylate cyclase, GGDEF domain 616 773 3.2E-51 T 01-11-2018 IPR000160 GGDEF domain CDA09_07760 bbcec2420c1a8fcce6f1ede92c88b2c3 1057 SUPERFAMILY SSF141868 793 1042 2.75E-90 T 01-11-2018 IPR035919 EAL domain superfamily CDA09_07760 bbcec2420c1a8fcce6f1ede92c88b2c3 1057 Pfam PF00989 PAS fold 371 480 7.7E-16 T 01-11-2018 IPR013767 PAS fold GO:0006355 CDA09_07760 bbcec2420c1a8fcce6f1ede92c88b2c3 1057 Gene3D G3DSA:3.30.450.20 494 615 2.0E-35 T 01-11-2018 CDA09_07760 bbcec2420c1a8fcce6f1ede92c88b2c3 1057 SMART SM00267 605 777 1.0E-70 T 01-11-2018 IPR000160 GGDEF domain CDA09_07760 bbcec2420c1a8fcce6f1ede92c88b2c3 1057 Gene3D G3DSA:3.30.70.270 616 790 4.3E-62 T 01-11-2018 CDA09_07760 bbcec2420c1a8fcce6f1ede92c88b2c3 1057 SUPERFAMILY SSF55785 496 603 1.08E-27 T 01-11-2018 IPR035965 PAS domain superfamily CDA09_07760 bbcec2420c1a8fcce6f1ede92c88b2c3 1057 SMART SM00052 787 1033 1.2E-116 T 01-11-2018 IPR001633 EAL domain CDA09_07760 bbcec2420c1a8fcce6f1ede92c88b2c3 1057 Gene3D G3DSA:3.30.450.20 43 244 2.7E-7 T 01-11-2018 CDA09_07760 bbcec2420c1a8fcce6f1ede92c88b2c3 1057 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 614 775 4.6E-43 T 01-11-2018 IPR000160 GGDEF domain CDA09_07760 bbcec2420c1a8fcce6f1ede92c88b2c3 1057 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 497 611 1.1E-18 T 01-11-2018 IPR000014 PAS domain CDA09_07760 bbcec2420c1a8fcce6f1ede92c88b2c3 1057 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 367 489 1.1E-17 T 01-11-2018 IPR000014 PAS domain CDA09_07760 bbcec2420c1a8fcce6f1ede92c88b2c3 1057 SUPERFAMILY SSF55785 376 483 2.97E-28 T 01-11-2018 IPR035965 PAS domain superfamily CDA09_07760 bbcec2420c1a8fcce6f1ede92c88b2c3 1057 Pfam PF13426 PAS domain 503 604 4.8E-15 T 01-11-2018 IPR000014 PAS domain CDA09_07760 bbcec2420c1a8fcce6f1ede92c88b2c3 1057 SMART SM00091 369 435 3.1E-6 T 01-11-2018 IPR000014 PAS domain CDA09_07760 bbcec2420c1a8fcce6f1ede92c88b2c3 1057 SMART SM00091 491 557 2.7E-5 T 01-11-2018 IPR000014 PAS domain CDA09_07760 bbcec2420c1a8fcce6f1ede92c88b2c3 1057 Gene3D G3DSA:3.20.20.450 791 1042 2.2E-102 T 01-11-2018 IPR035919 EAL domain superfamily CDA09_09855 69fcbb2febdf5f9a3371066ee4df39a7 381 Pfam PF02771 Acyl-CoA dehydrogenase, N-terminal domain 3 119 1.5E-17 T 01-11-2018 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal GO:0016627|GO:0050660|GO:0055114 CDA09_09855 69fcbb2febdf5f9a3371066ee4df39a7 381 Gene3D G3DSA:1.20.140.10 235 381 3.4E-29 T 01-11-2018 CDA09_09855 69fcbb2febdf5f9a3371066ee4df39a7 381 Gene3D G3DSA:1.10.540.10 1 119 7.0E-23 T 01-11-2018 IPR037069 Acyl-CoA dehydrogenase/oxidase, N-terminal domain superfamily GO:0016627|GO:0050660|GO:0055114 CDA09_09855 69fcbb2febdf5f9a3371066ee4df39a7 381 SUPERFAMILY SSF56645 6 241 1.44E-55 T 01-11-2018 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain superfamily GO:0016627|GO:0055114 CDA09_09855 69fcbb2febdf5f9a3371066ee4df39a7 381 Gene3D G3DSA:2.40.110.10 124 234 5.3E-29 T 01-11-2018 CDA09_09855 69fcbb2febdf5f9a3371066ee4df39a7 381 SUPERFAMILY SSF47203 230 377 3.06E-20 T 01-11-2018 IPR036250 Acyl-CoA dehydrogenase-like, C-terminal GO:0016627|GO:0055114 CDA09_09855 69fcbb2febdf5f9a3371066ee4df39a7 381 Pfam PF02770 Acyl-CoA dehydrogenase, middle domain 124 208 2.3E-19 T 01-11-2018 IPR006091 Acyl-CoA oxidase/dehydrogenase, central domain GO:0016627|GO:0055114 CDA09_09855 69fcbb2febdf5f9a3371066ee4df39a7 381 Pfam PF00441 Acyl-CoA dehydrogenase, C-terminal domain 230 377 1.1E-19 T 01-11-2018 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal GO:0016627|GO:0055114 CDA09_09730 5f33a13b4afeb9082b869e0bc5f9659d 544 SUPERFAMILY SSF54862 445 543 1.77E-28 T 01-11-2018 CDA09_09730 5f33a13b4afeb9082b869e0bc5f9659d 544 SUPERFAMILY SSF51905 1 443 1.3E-50 T 01-11-2018 IPR036188 FAD/NAD(P)-binding domain superfamily CDA09_09730 5f33a13b4afeb9082b869e0bc5f9659d 544 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 177 192 1.8E-6 T 01-11-2018 CDA09_09730 5f33a13b4afeb9082b869e0bc5f9659d 544 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 4 26 1.8E-6 T 01-11-2018 CDA09_09730 5f33a13b4afeb9082b869e0bc5f9659d 544 Pfam PF13450 NAD(P)-binding Rossmann-like domain 7 52 4.8E-7 T 01-11-2018 CDA09_09730 5f33a13b4afeb9082b869e0bc5f9659d 544 Gene3D G3DSA:3.50.50.60 2 383 4.5E-195 T 01-11-2018 IPR036188 FAD/NAD(P)-binding domain superfamily CDA09_09730 5f33a13b4afeb9082b869e0bc5f9659d 544 Gene3D G3DSA:3.30.9.90 74 445 4.5E-195 T 01-11-2018 CDA09_09730 5f33a13b4afeb9082b869e0bc5f9659d 544 SUPERFAMILY SSF54373 209 304 5.89E-38 T 01-11-2018 CDA09_09730 5f33a13b4afeb9082b869e0bc5f9659d 544 Pfam PF05187 Electron transfer flavoprotein-ubiquinone oxidoreductase, 4Fe-4S 441 542 9.6E-51 T 01-11-2018 CDA09_09730 5f33a13b4afeb9082b869e0bc5f9659d 544 Gene3D G3DSA:3.30.70.20 446 539 6.3E-40 T 01-11-2018 CDA09_08595 d3f26270cc4fa9861d5ebbf8b1db86a1 228 Gene3D G3DSA:3.40.50.850 1 227 6.1E-59 T 01-11-2018 IPR036380 Isochorismatase-like superfamily GO:0003824 CDA09_08595 d3f26270cc4fa9861d5ebbf8b1db86a1 228 Pfam PF00857 Isochorismatase family 36 215 6.0E-28 T 01-11-2018 IPR000868 Isochorismatase-like GO:0003824 CDA09_08595 d3f26270cc4fa9861d5ebbf8b1db86a1 228 SUPERFAMILY SSF52499 11 223 3.14E-45 T 01-11-2018 IPR036380 Isochorismatase-like superfamily GO:0003824 CDA09_14475 f7bf24bf21325f842edeac08f4a42942 471 Gene3D G3DSA:3.40.50.300 133 321 1.4E-57 T 01-11-2018 CDA09_14475 f7bf24bf21325f842edeac08f4a42942 471 SUPERFAMILY SSF52540 150 391 1.61E-64 T 01-11-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CDA09_14475 f7bf24bf21325f842edeac08f4a42942 471 SUPERFAMILY SSF46689 364 465 2.06E-15 T 01-11-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 CDA09_14475 f7bf24bf21325f842edeac08f4a42942 471 Pfam PF00072 Response regulator receiver domain 5 112 4.0E-27 T 01-11-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 CDA09_14475 f7bf24bf21325f842edeac08f4a42942 471 Pfam PF02954 Bacterial regulatory protein, Fis family 422 463 6.0E-17 T 01-11-2018 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 CDA09_14475 f7bf24bf21325f842edeac08f4a42942 471 PRINTS PR01590 FIS bacterial regulatory protein HTH signature 446 466 1.5E-12 T 01-11-2018 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 CDA09_14475 f7bf24bf21325f842edeac08f4a42942 471 PRINTS PR01590 FIS bacterial regulatory protein HTH signature 429 446 1.5E-12 T 01-11-2018 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 CDA09_14475 f7bf24bf21325f842edeac08f4a42942 471 Gene3D G3DSA:1.10.8.60 322 401 1.0E-22 T 01-11-2018 CDA09_14475 f7bf24bf21325f842edeac08f4a42942 471 Gene3D G3DSA:1.10.10.60 406 468 5.0E-18 T 01-11-2018 CDA09_14475 f7bf24bf21325f842edeac08f4a42942 471 ProSitePatterns PS00688 Sigma-54 interaction domain C-terminal part signature. 364 373 - T 01-11-2018 IPR025944 Sigma-54 interaction domain, conserved site CDA09_14475 f7bf24bf21325f842edeac08f4a42942 471 SMART SM00382 171 314 1.8E-10 T 01-11-2018 IPR003593 AAA+ ATPase domain CDA09_14475 f7bf24bf21325f842edeac08f4a42942 471 Pfam PF00158 Sigma-54 interaction domain 155 317 1.8E-61 T 01-11-2018 IPR002078 RNA polymerase sigma factor 54 interaction domain GO:0005524|GO:0006355|GO:0008134 CDA09_14475 f7bf24bf21325f842edeac08f4a42942 471 ProSitePatterns PS00676 Sigma-54 interaction domain ATP-binding region B signature. 237 252 - T 01-11-2018 IPR025943 Sigma-54 interaction domain, ATP-binding site 2 CDA09_14475 f7bf24bf21325f842edeac08f4a42942 471 SUPERFAMILY SSF52172 5 194 3.27E-41 T 01-11-2018 IPR011006 CheY-like superfamily CDA09_14475 f7bf24bf21325f842edeac08f4a42942 471 Gene3D G3DSA:3.40.50.2300 1 132 2.1E-34 T 01-11-2018 CDA09_14475 f7bf24bf21325f842edeac08f4a42942 471 ProSitePatterns PS00675 Sigma-54 interaction domain ATP-binding region A signature. 175 188 - T 01-11-2018 IPR025662 Sigma-54 interaction domain, ATP-binding site 1 CDA09_14475 f7bf24bf21325f842edeac08f4a42942 471 SMART SM00448 3 114 2.1E-35 T 01-11-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 CDA09_12585 9ff35483d6871de66d0ebda2129fecfa 563 Pfam PF02272 DHHA1 domain 319 447 1.8E-24 T 01-11-2018 IPR003156 DHHA1 domain GO:0003676 KEGG: 00970+6.1.1.7|Reactome: R-HSA-379716 CDA09_12585 9ff35483d6871de66d0ebda2129fecfa 563 SUPERFAMILY SSF64182 48 459 8.5E-116 T 01-11-2018 IPR038763 DHH phosphoesterase superfamily CDA09_12585 9ff35483d6871de66d0ebda2129fecfa 563 Pfam PF01368 DHH family 75 176 3.6E-8 T 01-11-2018 IPR001667 DDH domain KEGG: 00190+3.6.1.1|MetaCyc: PWY-7805|MetaCyc: PWY-7807 CDA09_12585 9ff35483d6871de66d0ebda2129fecfa 563 Gene3D G3DSA:2.40.50.460 456 563 5.8E-7 T 01-11-2018 CDA09_12585 9ff35483d6871de66d0ebda2129fecfa 563 TIGRFAM TIGR00644 recJ: single-stranded-DNA-specific exonuclease RecJ 23 559 2.6E-138 T 01-11-2018 IPR004610 Bacterial RecJ exonuclease GO:0006281|GO:0006310|GO:0008409 CDA09_12585 9ff35483d6871de66d0ebda2129fecfa 563 Gene3D G3DSA:3.10.310.30 324 452 3.8E-30 T 01-11-2018 CDA09_12585 9ff35483d6871de66d0ebda2129fecfa 563 Gene3D G3DSA:3.90.1640.30 48 323 8.3E-86 T 01-11-2018 CDA09_04970 7cb221371196ddecdb290fbe56143231 315 Hamap MF_00260 Porphobilinogen deaminase [hemC]. 13 305 37.514 T 01-11-2018 IPR000860 Porphobilinogen deaminase GO:0004418|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451 CDA09_04970 7cb221371196ddecdb290fbe56143231 315 PIRSF PIRSF001438 2 315 1.9E-115 T 01-11-2018 IPR000860 Porphobilinogen deaminase GO:0004418|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451 CDA09_04970 7cb221371196ddecdb290fbe56143231 315 Gene3D G3DSA:3.40.190.10 14 216 6.7E-80 T 01-11-2018 CDA09_04970 7cb221371196ddecdb290fbe56143231 315 Pfam PF01379 Porphobilinogen deaminase, dipyromethane cofactor binding domain 14 220 4.6E-75 T 01-11-2018 IPR022417 Porphobilinogen deaminase, N-terminal GO:0004418|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451 CDA09_04970 7cb221371196ddecdb290fbe56143231 315 PRINTS PR00151 Porphobilinogen deaminase signature 84 103 3.4E-45 T 01-11-2018 IPR000860 Porphobilinogen deaminase GO:0004418|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451 CDA09_04970 7cb221371196ddecdb290fbe56143231 315 PRINTS PR00151 Porphobilinogen deaminase signature 151 168 3.4E-45 T 01-11-2018 IPR000860 Porphobilinogen deaminase GO:0004418|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451 CDA09_04970 7cb221371196ddecdb290fbe56143231 315 PRINTS PR00151 Porphobilinogen deaminase signature 132 149 3.4E-45 T 01-11-2018 IPR000860 Porphobilinogen deaminase GO:0004418|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451 CDA09_04970 7cb221371196ddecdb290fbe56143231 315 PRINTS PR00151 Porphobilinogen deaminase signature 53 73 3.4E-45 T 01-11-2018 IPR000860 Porphobilinogen deaminase GO:0004418|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451 CDA09_04970 7cb221371196ddecdb290fbe56143231 315 PRINTS PR00151 Porphobilinogen deaminase signature 238 255 3.4E-45 T 01-11-2018 IPR000860 Porphobilinogen deaminase GO:0004418|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451 CDA09_04970 7cb221371196ddecdb290fbe56143231 315 SUPERFAMILY SSF54782 228 314 8.63E-25 T 01-11-2018 IPR036803 Porphobilinogen deaminase, C-terminal domain superfamily GO:0004418|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451 CDA09_04970 7cb221371196ddecdb290fbe56143231 315 Pfam PF03900 Porphobilinogen deaminase, C-terminal domain 234 303 8.7E-18 T 01-11-2018 IPR022418 Porphobilinogen deaminase, C-terminal GO:0004418|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451 CDA09_04970 7cb221371196ddecdb290fbe56143231 315 Gene3D G3DSA:3.30.160.40 229 314 1.1E-26 T 01-11-2018 IPR036803 Porphobilinogen deaminase, C-terminal domain superfamily GO:0004418|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451 CDA09_04970 7cb221371196ddecdb290fbe56143231 315 Gene3D G3DSA:3.40.190.10 111 210 6.7E-80 T 01-11-2018 CDA09_04970 7cb221371196ddecdb290fbe56143231 315 ProSitePatterns PS00533 Porphobilinogen deaminase cofactor-binding site. 239 255 - T 01-11-2018 IPR022419 Porphobilinogen deaminase, dipyrromethane cofactor binding site GO:0004418|GO:0018160|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451 CDA09_04970 7cb221371196ddecdb290fbe56143231 315 TIGRFAM TIGR00212 hemC: hydroxymethylbilane synthase 14 303 5.6E-104 T 01-11-2018 IPR000860 Porphobilinogen deaminase GO:0004418|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451 CDA09_04970 7cb221371196ddecdb290fbe56143231 315 SUPERFAMILY SSF53850 13 227 9.45E-82 T 01-11-2018 CDA09_05400 3bb38962501ad67e65ba8e980839a374 306 Pfam PF01063 Amino-transferase class IV 36 266 4.4E-53 T 01-11-2018 IPR001544 Aminotransferase class IV GO:0003824 Reactome: R-HSA-70895 CDA09_05400 3bb38962501ad67e65ba8e980839a374 306 Gene3D G3DSA:3.30.470.10 2 129 2.8E-42 T 01-11-2018 CDA09_05400 3bb38962501ad67e65ba8e980839a374 306 SUPERFAMILY SSF56752 1 303 1.44E-104 T 01-11-2018 IPR036038 Aminotransferase-like, PLP-dependent enzymes GO:0003824 Reactome: R-HSA-70895 CDA09_05400 3bb38962501ad67e65ba8e980839a374 306 TIGRFAM TIGR01122 ilvE_I: branched-chain amino acid aminotransferase 11 306 2.5E-138 T 01-11-2018 IPR005785 Branched-chain amino acid aminotransferase I GO:0004084|GO:0009081 KEGG: 00270+2.6.1.42|KEGG: 00280+2.6.1.42|KEGG: 00290+2.6.1.42|KEGG: 00770+2.6.1.42|KEGG: 00966+2.6.1.42|MetaCyc: PWY-5057|MetaCyc: PWY-5076|MetaCyc: PWY-5078|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-5108|MetaCyc: PWY-7767 CDA09_05400 3bb38962501ad67e65ba8e980839a374 306 Gene3D G3DSA:3.20.10.10 130 295 8.6E-55 T 01-11-2018 CDA09_10110 a4b61c533f46c4d231d67a10f0023c6f 318 Gene3D G3DSA:3.40.50.620 1 184 3.0E-23 T 01-11-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold CDA09_10110 a4b61c533f46c4d231d67a10f0023c6f 318 Pfam PF00766 Electron transfer flavoprotein FAD-binding domain 197 278 3.8E-32 T 01-11-2018 IPR014731 Electron transfer flavoprotein, alpha subunit, C-terminal Reactome: R-HSA-611105 CDA09_10110 a4b61c533f46c4d231d67a10f0023c6f 318 Pfam PF01012 Electron transfer flavoprotein domain 12 168 2.6E-17 T 01-11-2018 IPR014730 Electron transfer flavoprotein, alpha/beta-subunit, N-terminal Reactome: R-HSA-611105 CDA09_10110 a4b61c533f46c4d231d67a10f0023c6f 318 Gene3D G3DSA:3.40.50.1220 192 318 8.1E-51 T 01-11-2018 CDA09_10110 a4b61c533f46c4d231d67a10f0023c6f 318 PIRSF PIRSF000089 1 318 5.5E-75 T 01-11-2018 IPR001308 Electron transfer flavoprotein alpha subunit/FixB GO:0009055|GO:0050660 Reactome: R-HSA-611105 CDA09_10110 a4b61c533f46c4d231d67a10f0023c6f 318 SMART SM00893 2 189 4.5E-4 T 01-11-2018 IPR014730 Electron transfer flavoprotein, alpha/beta-subunit, N-terminal Reactome: R-HSA-611105 CDA09_10110 a4b61c533f46c4d231d67a10f0023c6f 318 SUPERFAMILY SSF52467 197 314 2.4E-42 T 01-11-2018 IPR029035 DHS-like NAD/FAD-binding domain superfamily CDA09_10110 a4b61c533f46c4d231d67a10f0023c6f 318 SUPERFAMILY SSF52402 8 177 1.12E-21 T 01-11-2018 CDA09_15450 10916ef7969d58d1bb8e4929354fa095 309 SUPERFAMILY SSF141523 2 157 2.35E-26 T 01-11-2018 IPR038063 L,D-transpeptidase catalytic domain-like CDA09_15450 10916ef7969d58d1bb8e4929354fa095 309 Gene3D G3DSA:3.40.630.30 165 305 2.0E-35 T 01-11-2018 CDA09_15450 10916ef7969d58d1bb8e4929354fa095 309 Pfam PF13673 Acetyltransferase (GNAT) domain 187 303 2.3E-18 T 01-11-2018 IPR000182 GNAT domain CDA09_15450 10916ef7969d58d1bb8e4929354fa095 309 SUPERFAMILY SSF55729 169 305 9.39E-35 T 01-11-2018 IPR016181 Acyl-CoA N-acyltransferase CDA09_15450 10916ef7969d58d1bb8e4929354fa095 309 Pfam PF03734 L,D-transpeptidase catalytic domain 2 157 1.9E-18 T 01-11-2018 IPR005490 L,D-transpeptidase catalytic domain GO:0016740 CDA09_21430 720229b04923af33be08c1bf324c20d3 344 TIGRFAM TIGR03217 4OH_2_O_val_ald: 4-hydroxy-2-oxovalerate aldolase 6 338 3.4E-166 T 01-11-2018 IPR017629 4-hydroxy-2-oxovalerate aldolase GO:0008701|GO:0019439 KEGG: 00360+4.1.3.39|KEGG: 00362+4.1.3.39|KEGG: 00621+4.1.3.39|KEGG: 00622+4.1.3.39|MetaCyc: PWY-5162 CDA09_21430 720229b04923af33be08c1bf324c20d3 344 SUPERFAMILY SSF51569 4 276 1.72E-64 T 01-11-2018 CDA09_21430 720229b04923af33be08c1bf324c20d3 344 Pfam PF07836 DmpG-like communication domain 276 337 4.3E-30 T 01-11-2018 IPR012425 DmpG-like communication GO:0016833|GO:0019439 KEGG: 00360+4.1.3.39|KEGG: 00362+4.1.3.39|KEGG: 00621+4.1.3.39|KEGG: 00622+4.1.3.39|MetaCyc: PWY-5162 CDA09_21430 720229b04923af33be08c1bf324c20d3 344 Gene3D G3DSA:3.20.20.70 3 270 1.6E-81 T 01-11-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 CDA09_21430 720229b04923af33be08c1bf324c20d3 344 ProDom PD005364 ALDOLASE 4-HYDROXY-2-OXOVALERATE LYASE PYRUVATE 4.1.3.- PLASMID HMG-COA LYASE-LIKE TRANSFERASE HOA 274 338 5.0E-30 T 01-11-2018 IPR012425 DmpG-like communication GO:0016833|GO:0019439 KEGG: 00360+4.1.3.39|KEGG: 00362+4.1.3.39|KEGG: 00621+4.1.3.39|KEGG: 00622+4.1.3.39|MetaCyc: PWY-5162 CDA09_21430 720229b04923af33be08c1bf324c20d3 344 Pfam PF00682 HMGL-like 8 264 3.9E-54 T 01-11-2018 IPR000891 Pyruvate carboxyltransferase GO:0003824 CDA09_21430 720229b04923af33be08c1bf324c20d3 344 SUPERFAMILY SSF89000 290 338 3.18E-16 T 01-11-2018 CDA09_21430 720229b04923af33be08c1bf324c20d3 344 Gene3D G3DSA:1.10.8.60 277 342 1.7E-30 T 01-11-2018 CDA09_21430 720229b04923af33be08c1bf324c20d3 344 Hamap MF_01656 4-hydroxy-2-oxovalerate aldolase [mhpE]. 1 344 209.209 T 01-11-2018 IPR017629 4-hydroxy-2-oxovalerate aldolase GO:0008701|GO:0019439 KEGG: 00360+4.1.3.39|KEGG: 00362+4.1.3.39|KEGG: 00621+4.1.3.39|KEGG: 00622+4.1.3.39|MetaCyc: PWY-5162 CDA09_04670 d48e724880a0233acf60bee32f7d3377 1219 SUPERFAMILY SSF81935 19 188 2.75E-62 T 01-11-2018 IPR024089 Proline dehydrogenase PutA, domain I/II GO:0003842|GO:0055114 KEGG: 00250+1.2.1.88|KEGG: 00330+1.5.5.2+1.2.1.88|MetaCyc: PWY-5737|MetaCyc: PWY-6853|MetaCyc: PWY-6922 CDA09_04670 d48e724880a0233acf60bee32f7d3377 1219 SUPERFAMILY SSF53720 567 1020 9.29E-121 T 01-11-2018 IPR016161 Aldehyde/histidinol dehydrogenase GO:0016491|GO:0055114 CDA09_04670 d48e724880a0233acf60bee32f7d3377 1219 SUPERFAMILY SSF51730 189 536 1.65E-123 T 01-11-2018 IPR029041 FAD-linked oxidoreductase-like CDA09_04670 d48e724880a0233acf60bee32f7d3377 1219 Gene3D G3DSA:3.20.20.220 144 528 6.9E-147 T 01-11-2018 CDA09_04670 d48e724880a0233acf60bee32f7d3377 1219 SUPERFAMILY SSF53720 1064 1175 7.72E-5 T 01-11-2018 IPR016161 Aldehyde/histidinol dehydrogenase GO:0016491|GO:0055114 CDA09_04670 d48e724880a0233acf60bee32f7d3377 1219 PIRSF PIRSF000197 5 1218 0.0 T 01-11-2018 IPR025703 Bifunctional protein PutA GO:0003700|GO:0003842|GO:0004657|GO:0006355|GO:0010133 KEGG: 00250+1.2.1.88|KEGG: 00330+1.5.5.2+1.2.1.88|MetaCyc: PWY-5737|MetaCyc: PWY-6853|MetaCyc: PWY-6922 CDA09_04670 d48e724880a0233acf60bee32f7d3377 1219 Pfam PF14850 DNA-binding domain of Proline dehydrogenase 75 186 5.1E-46 T 01-11-2018 IPR024082 Proline dehydrogenase PutA, domain II GO:0003842|GO:0055114 KEGG: 00250+1.2.1.88|KEGG: 00330+1.5.5.2+1.2.1.88|MetaCyc: PWY-5737|MetaCyc: PWY-6853|MetaCyc: PWY-6922 CDA09_04670 d48e724880a0233acf60bee32f7d3377 1219 Gene3D G3DSA:3.40.605.10 557 1018 3.3E-137 T 01-11-2018 IPR016162 Aldehyde dehydrogenase, N-terminal GO:0016491|GO:0055114 CDA09_04670 d48e724880a0233acf60bee32f7d3377 1219 Gene3D G3DSA:3.20.20.220 19 115 3.5E-11 T 01-11-2018 CDA09_04670 d48e724880a0233acf60bee32f7d3377 1219 TIGRFAM TIGR01238 D1pyr5carbox3: delta-1-pyrroline-5-carboxylate dehydrogenase 528 1019 5.7E-219 T 01-11-2018 IPR005933 Delta-1-pyrroline-5-carboxylate dehydrogenase 3 GO:0003842|GO:0006561|GO:0055114 KEGG: 00250+1.2.1.88|KEGG: 00330+1.5.5.2+1.2.1.88|MetaCyc: PWY-5737|MetaCyc: PWY-6853|MetaCyc: PWY-6922 CDA09_04670 d48e724880a0233acf60bee32f7d3377 1219 Gene3D G3DSA:3.40.309.10 798 990 3.3E-137 T 01-11-2018 IPR016163 Aldehyde dehydrogenase, C-terminal GO:0016491|GO:0016620|GO:0055114 CDA09_04670 d48e724880a0233acf60bee32f7d3377 1219 ProSitePatterns PS00070 Aldehyde dehydrogenases cysteine active site. 823 834 - T 01-11-2018 IPR016160 Aldehyde dehydrogenase, cysteine active site GO:0016491|GO:0055114 CDA09_04670 d48e724880a0233acf60bee32f7d3377 1219 Pfam PF00171 Aldehyde dehydrogenase family 579 1018 4.1E-111 T 01-11-2018 IPR015590 Aldehyde dehydrogenase domain GO:0016491|GO:0055114 CDA09_04670 d48e724880a0233acf60bee32f7d3377 1219 Pfam PF01619 Proline dehydrogenase 198 492 2.3E-99 T 01-11-2018 IPR002872 Proline dehydrogenase domain KEGG: 00330+1.5.5.2|MetaCyc: PWY-5737|MetaCyc: PWY-6922|Reactome: R-HSA-70688 CDA09_07845 40accb431c77a6761b9ec42fc391d728 598 TIGRFAM TIGR03075 PQQ_enz_alc_DH: PQQ-dependent dehydrogenase, methanol/ethanol family 29 568 2.8E-235 T 01-11-2018 IPR017512 PQQ-dependent dehydrogenase, methanol/ethanol family GO:0005509|GO:0016020|GO:0016614|GO:0055114 CDA09_07845 40accb431c77a6761b9ec42fc391d728 598 ProSitePatterns PS00364 Bacterial quinoprotein dehydrogenases signature 2. 267 288 - T 01-11-2018 IPR001479 Quinoprotein dehydrogenase, conserved site GO:0030288|GO:0055114 CDA09_07845 40accb431c77a6761b9ec42fc391d728 598 Pfam PF13360 PQQ-like domain 78 230 1.0E-15 T 01-11-2018 IPR002372 Pyrrolo-quinoline quinone repeat CDA09_07845 40accb431c77a6761b9ec42fc391d728 598 SUPERFAMILY SSF50998 47 591 4.71E-159 T 01-11-2018 IPR011047 Quinoprotein alcohol dehydrogenase-like superfamily CDA09_07845 40accb431c77a6761b9ec42fc391d728 598 Gene3D G3DSA:2.140.10.10 30 598 6.6E-214 T 01-11-2018 CDA09_07845 40accb431c77a6761b9ec42fc391d728 598 Pfam PF01011 PQQ enzyme repeat 514 550 4.4E-10 T 01-11-2018 IPR002372 Pyrrolo-quinoline quinone repeat CDA09_07845 40accb431c77a6761b9ec42fc391d728 598 SMART SM00564 272 319 150.0 T 01-11-2018 IPR018391 Pyrrolo-quinoline quinone beta-propeller repeat CDA09_07845 40accb431c77a6761b9ec42fc391d728 598 SMART SM00564 188 225 6.3 T 01-11-2018 IPR018391 Pyrrolo-quinoline quinone beta-propeller repeat CDA09_07845 40accb431c77a6761b9ec42fc391d728 598 SMART SM00564 508 540 2.5E-4 T 01-11-2018 IPR018391 Pyrrolo-quinoline quinone beta-propeller repeat CDA09_07845 40accb431c77a6761b9ec42fc391d728 598 SMART SM00564 93 125 7.4E-6 T 01-11-2018 IPR018391 Pyrrolo-quinoline quinone beta-propeller repeat CDA09_07845 40accb431c77a6761b9ec42fc391d728 598 SMART SM00564 457 499 38.0 T 01-11-2018 IPR018391 Pyrrolo-quinoline quinone beta-propeller repeat CDA09_07845 40accb431c77a6761b9ec42fc391d728 598 SMART SM00564 143 174 6.8E-5 T 01-11-2018 IPR018391 Pyrrolo-quinoline quinone beta-propeller repeat CDA09_17425 0df9173756d6bce9530ee07ef5e1d65e 247 SUPERFAMILY SSF64167 1 246 1.7E-87 T 01-11-2018 CDA09_17425 0df9173756d6bce9530ee07ef5e1d65e 247 Gene3D G3DSA:3.40.1210.10 1 247 6.9E-94 T 01-11-2018 IPR036523 SurE-like phosphatase/nucleotidase superfamily GO:0016787 KEGG: 00230+3.1.3.5|KEGG: 00240+3.1.3.5|KEGG: 00760+3.1.3.5|MetaCyc: PWY-5381|MetaCyc: PWY-5695|MetaCyc: PWY-6596|MetaCyc: PWY-6606|MetaCyc: PWY-6607|MetaCyc: PWY-6608|MetaCyc: PWY-7185|MetaCyc: PWY-7821 CDA09_17425 0df9173756d6bce9530ee07ef5e1d65e 247 Pfam PF01975 Survival protein SurE 3 182 1.7E-60 T 01-11-2018 IPR002828 Survival protein SurE-like phosphatase/nucleotidase GO:0016787 KEGG: 00230+3.1.3.5|KEGG: 00240+3.1.3.5|KEGG: 00760+3.1.3.5|MetaCyc: PWY-5381|MetaCyc: PWY-5695|MetaCyc: PWY-6596|MetaCyc: PWY-6606|MetaCyc: PWY-6607|MetaCyc: PWY-6608|MetaCyc: PWY-7185|MetaCyc: PWY-7821 CDA09_17425 0df9173756d6bce9530ee07ef5e1d65e 247 TIGRFAM TIGR00087 surE: 5'/3'-nucleotidase SurE 1 233 1.3E-70 T 01-11-2018 IPR002828 Survival protein SurE-like phosphatase/nucleotidase GO:0016787 KEGG: 00230+3.1.3.5|KEGG: 00240+3.1.3.5|KEGG: 00760+3.1.3.5|MetaCyc: PWY-5381|MetaCyc: PWY-5695|MetaCyc: PWY-6596|MetaCyc: PWY-6606|MetaCyc: PWY-6607|MetaCyc: PWY-6608|MetaCyc: PWY-7185|MetaCyc: PWY-7821 CDA09_17425 0df9173756d6bce9530ee07ef5e1d65e 247 Hamap MF_00060 5'/3'-nucleotidase SurE [surE]. 1 247 39.793 T 01-11-2018 IPR030048 Survival protein SurE GO:0008252 KEGG: 00230+3.1.3.5|KEGG: 00240+3.1.3.5|KEGG: 00760+3.1.3.5|MetaCyc: PWY-5381|MetaCyc: PWY-5695|MetaCyc: PWY-6596|MetaCyc: PWY-6606|MetaCyc: PWY-6607|MetaCyc: PWY-6608|MetaCyc: PWY-7185|MetaCyc: PWY-7821 CDA09_05510 294ace17b73734c936052963b8794aa0 139 Pfam PF02915 Rubrerythrin 11 133 5.3E-27 T 01-11-2018 IPR003251 Rubrerythrin GO:0016491|GO:0046872|GO:0055114 CDA09_05510 294ace17b73734c936052963b8794aa0 139 Gene3D G3DSA:1.20.1260.10 1 139 4.3E-52 T 01-11-2018 IPR012347 Ferritin-like CDA09_05510 294ace17b73734c936052963b8794aa0 139 SUPERFAMILY SSF47240 3 138 3.03E-40 T 01-11-2018 IPR009078 Ferritin-like superfamily CDA09_13390 eca725ce07a134ae6f69f54d278db3bd 787 SUPERFAMILY SSF82866 180 386 1.44E-18 T 01-11-2018 CDA09_13390 eca725ce07a134ae6f69f54d278db3bd 787 Pfam PF03176 MMPL family 178 386 2.0E-9 T 01-11-2018 IPR004869 Membrane transport protein MMPL domain GO:0016020 CDA09_13390 eca725ce07a134ae6f69f54d278db3bd 787 SUPERFAMILY SSF82866 610 773 1.96E-12 T 01-11-2018 CDA09_16185 78ecd08387a0eb817f8869a91bee48a5 200 Gene3D G3DSA:1.20.120.1200 4 166 6.4E-46 T 01-11-2018 CDA09_16185 78ecd08387a0eb817f8869a91bee48a5 200 Pfam PF00499 NADH-ubiquinone/plastoquinone oxidoreductase chain 6 19 165 5.7E-40 T 01-11-2018 IPR001457 NADH:ubiquinone/plastoquinone oxidoreductase, chain 6 GO:0008137|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 CDA09_01035 729029578e464709889fa903228dd810 506 Gene3D G3DSA:3.40.50.2300 153 462 3.0E-41 T 01-11-2018 CDA09_01035 729029578e464709889fa903228dd810 506 Gene3D G3DSA:1.10.760.10 2 137 2.9E-9 T 01-11-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 CDA09_01035 729029578e464709889fa903228dd810 506 Gene3D G3DSA:3.40.50.2300 262 392 3.0E-41 T 01-11-2018 CDA09_01035 729029578e464709889fa903228dd810 506 Pfam PF13458 Periplasmic binding protein 146 486 1.1E-44 T 01-11-2018 IPR028081 Leucine-binding protein domain CDA09_01035 729029578e464709889fa903228dd810 506 SUPERFAMILY SSF46626 45 140 2.4E-11 T 01-11-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 CDA09_01035 729029578e464709889fa903228dd810 506 Pfam PF00034 Cytochrome c 45 133 1.8E-6 T 01-11-2018 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 Reactome: R-HSA-111457|Reactome: R-HSA-111458|Reactome: R-HSA-111459|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 CDA09_01035 729029578e464709889fa903228dd810 506 SUPERFAMILY SSF53822 146 492 5.38E-48 T 01-11-2018 IPR028082 Periplasmic binding protein-like I CDA09_15605 41b9f2f8f31fe9a6c9483ae11e15e9b6 375 SUPERFAMILY SSF53474 41 307 6.43E-24 T 01-11-2018 IPR029058 Alpha/Beta hydrolase fold CDA09_15605 41b9f2f8f31fe9a6c9483ae11e15e9b6 375 Gene3D G3DSA:3.40.50.1820 42 314 5.1E-20 T 01-11-2018 IPR029058 Alpha/Beta hydrolase fold CDA09_15605 41b9f2f8f31fe9a6c9483ae11e15e9b6 375 Pfam PF00326 Prolyl oligopeptidase family 117 298 1.1E-6 T 01-11-2018 IPR001375 Peptidase S9, prolyl oligopeptidase, catalytic domain GO:0006508|GO:0008236 CDA09_18640 ec8b5ab73773de01f18d34cee2058246 271 Pfam PF02673 Bacitracin resistance protein BacA 9 259 3.1E-84 T 01-11-2018 IPR003824 Undecaprenyl-diphosphatase UppP GO:0016020|GO:0016311|GO:0050380 KEGG: 00550+3.6.1.27|MetaCyc: PWY-5785 CDA09_18640 ec8b5ab73773de01f18d34cee2058246 271 TIGRFAM TIGR00753 undec_PP_bacA: undecaprenyl-diphosphatase UppP 9 257 7.2E-80 T 01-11-2018 IPR003824 Undecaprenyl-diphosphatase UppP GO:0016020|GO:0016311|GO:0050380 KEGG: 00550+3.6.1.27|MetaCyc: PWY-5785 CDA09_18640 ec8b5ab73773de01f18d34cee2058246 271 Hamap MF_01006 Undecaprenyl-diphosphatase [uppP]. 4 264 17.879 T 01-11-2018 IPR003824 Undecaprenyl-diphosphatase UppP GO:0016020|GO:0016311|GO:0050380 KEGG: 00550+3.6.1.27|MetaCyc: PWY-5785 CDA09_00685 a9aa9d47045d80837b231afa369e98df 1473 SUPERFAMILY SSF55785 492 607 4.01E-21 T 01-11-2018 IPR035965 PAS domain superfamily CDA09_00685 a9aa9d47045d80837b231afa369e98df 1473 Pfam PF00072 Response regulator receiver domain 1136 1245 4.6E-24 T 01-11-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 CDA09_00685 a9aa9d47045d80837b231afa369e98df 1473 Pfam PF00072 Response regulator receiver domain 985 1103 1.6E-19 T 01-11-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 CDA09_00685 a9aa9d47045d80837b231afa369e98df 1473 Pfam PF00989 PAS fold 484 597 3.0E-14 T 01-11-2018 IPR013767 PAS fold GO:0006355 CDA09_00685 a9aa9d47045d80837b231afa369e98df 1473 Gene3D G3DSA:1.20.120.160 1277 1386 6.7E-17 T 01-11-2018 IPR036641 HPT domain superfamily GO:0000160 CDA09_00685 a9aa9d47045d80837b231afa369e98df 1473 SUPERFAMILY SSF52172 1131 1253 1.99E-36 T 01-11-2018 IPR011006 CheY-like superfamily CDA09_00685 a9aa9d47045d80837b231afa369e98df 1473 SUPERFAMILY SSF55781 267 426 5.49E-24 T 01-11-2018 CDA09_00685 a9aa9d47045d80837b231afa369e98df 1473 SMART SM00448 1134 1248 2.1E-33 T 01-11-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 CDA09_00685 a9aa9d47045d80837b231afa369e98df 1473 SMART SM00448 983 1103 4.6E-24 T 01-11-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 CDA09_00685 a9aa9d47045d80837b231afa369e98df 1473 Gene3D G3DSA:3.40.50.2300 971 1110 2.9E-30 T 01-11-2018 CDA09_00685 a9aa9d47045d80837b231afa369e98df 1473 Gene3D G3DSA:1.10.287.130 717 800 9.8E-29 T 01-11-2018 CDA09_00685 a9aa9d47045d80837b231afa369e98df 1473 SMART SM00091 481 547 1.8E-7 T 01-11-2018 IPR000014 PAS domain CDA09_00685 a9aa9d47045d80837b231afa369e98df 1473 SMART SM00091 612 674 18.0 T 01-11-2018 IPR000014 PAS domain CDA09_00685 a9aa9d47045d80837b231afa369e98df 1473 SUPERFAMILY SSF55785 597 715 2.09E-14 T 01-11-2018 IPR035965 PAS domain superfamily CDA09_00685 a9aa9d47045d80837b231afa369e98df 1473 Pfam PF01627 Hpt domain 1299 1365 1.4E-7 T 01-11-2018 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160 CDA09_00685 a9aa9d47045d80837b231afa369e98df 1473 SUPERFAMILY SSF47226 1277 1385 3.01E-17 T 01-11-2018 IPR036641 HPT domain superfamily GO:0000160 CDA09_00685 a9aa9d47045d80837b231afa369e98df 1473 Pfam PF00512 His Kinase A (phospho-acceptor) domain 737 802 1.9E-19 T 01-11-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 CDA09_00685 a9aa9d47045d80837b231afa369e98df 1473 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 610 723 8.0E-6 T 01-11-2018 IPR000014 PAS domain CDA09_00685 a9aa9d47045d80837b231afa369e98df 1473 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 480 606 5.2E-18 T 01-11-2018 IPR000014 PAS domain CDA09_00685 a9aa9d47045d80837b231afa369e98df 1473 Gene3D G3DSA:1.10.8.500 218 266 2.3E-9 T 01-11-2018 CDA09_00685 a9aa9d47045d80837b231afa369e98df 1473 SMART SM00304 218 271 5.5E-6 T 01-11-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 CDA09_00685 a9aa9d47045d80837b231afa369e98df 1473 Gene3D G3DSA:3.30.450.20 489 608 2.8E-26 T 01-11-2018 CDA09_00685 a9aa9d47045d80837b231afa369e98df 1473 Gene3D G3DSA:3.40.50.2300 1132 1260 2.8E-39 T 01-11-2018 CDA09_00685 a9aa9d47045d80837b231afa369e98df 1473 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 849 962 3.9E-28 T 01-11-2018 IPR003594 Histidine kinase/HSP90-like ATPase CDA09_00685 a9aa9d47045d80837b231afa369e98df 1473 PRINTS PR00344 Bacterial sensor protein C-terminal signature 908 918 1.5E-10 T 01-11-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 CDA09_00685 a9aa9d47045d80837b231afa369e98df 1473 PRINTS PR00344 Bacterial sensor protein C-terminal signature 925 943 1.5E-10 T 01-11-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 CDA09_00685 a9aa9d47045d80837b231afa369e98df 1473 PRINTS PR00344 Bacterial sensor protein C-terminal signature 949 962 1.5E-10 T 01-11-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 CDA09_00685 a9aa9d47045d80837b231afa369e98df 1473 PRINTS PR00344 Bacterial sensor protein C-terminal signature 890 904 1.5E-10 T 01-11-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 CDA09_00685 a9aa9d47045d80837b231afa369e98df 1473 Pfam PF12729 Four helix bundle sensory module for signal transduction 15 152 1.8E-18 T 01-11-2018 IPR024478 Chemotaxis methyl-accepting receptor HlyB-like, 4HB MCP domain CDA09_00685 a9aa9d47045d80837b231afa369e98df 1473 Gene3D G3DSA:3.30.450.20 612 716 2.1E-10 T 01-11-2018 CDA09_00685 a9aa9d47045d80837b231afa369e98df 1473 SUPERFAMILY SSF47384 723 804 1.31E-21 T 01-11-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 CDA09_00685 a9aa9d47045d80837b231afa369e98df 1473 Gene3D G3DSA:3.30.450.40 267 431 4.5E-19 T 01-11-2018 IPR029016 GAF-like domain superfamily CDA09_00685 a9aa9d47045d80837b231afa369e98df 1473 Gene3D G3DSA:3.30.565.10 801 966 1.3E-48 T 01-11-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily CDA09_00685 a9aa9d47045d80837b231afa369e98df 1473 SMART SM00086 560 600 4.4 T 01-11-2018 IPR001610 PAC motif CDA09_00685 a9aa9d47045d80837b231afa369e98df 1473 SMART SM00086 677 717 0.4 T 01-11-2018 IPR001610 PAC motif CDA09_00685 a9aa9d47045d80837b231afa369e98df 1473 SMART SM00388 737 802 2.5E-24 T 01-11-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 CDA09_00685 a9aa9d47045d80837b231afa369e98df 1473 SMART SM00387 849 965 7.7E-35 T 01-11-2018 IPR003594 Histidine kinase/HSP90-like ATPase CDA09_00685 a9aa9d47045d80837b231afa369e98df 1473 SUPERFAMILY SSF55874 791 960 1.83E-43 T 01-11-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily CDA09_00685 a9aa9d47045d80837b231afa369e98df 1473 SUPERFAMILY SSF52172 982 1114 7.12E-29 T 01-11-2018 IPR011006 CheY-like superfamily CDA09_00685 a9aa9d47045d80837b231afa369e98df 1473 SUPERFAMILY SSF158472 219 266 7.98E-6 T 01-11-2018 CDA09_00685 a9aa9d47045d80837b231afa369e98df 1473 Pfam PF13185 GAF domain 290 425 8.8E-16 T 01-11-2018 IPR003018 GAF domain GO:0005515 CDA09_09110 b17c39df310fa13428cd94363c0ed6be 293 SUPERFAMILY SSF53474 4 277 3.65E-47 T 01-11-2018 IPR029058 Alpha/Beta hydrolase fold CDA09_09110 b17c39df310fa13428cd94363c0ed6be 293 Gene3D G3DSA:3.40.50.1820 1 276 1.3E-59 T 01-11-2018 IPR029058 Alpha/Beta hydrolase fold CDA09_09110 b17c39df310fa13428cd94363c0ed6be 293 Pfam PF12697 Alpha/beta hydrolase family 27 269 2.6E-18 T 01-11-2018 IPR000073 Alpha/beta hydrolase fold-1 CDA09_09110 b17c39df310fa13428cd94363c0ed6be 293 PRINTS PR00111 Alpha/beta hydrolase fold signature 95 108 2.1E-5 T 01-11-2018 IPR000073 Alpha/beta hydrolase fold-1 CDA09_09110 b17c39df310fa13428cd94363c0ed6be 293 PRINTS PR00111 Alpha/beta hydrolase fold signature 51 66 2.1E-5 T 01-11-2018 IPR000073 Alpha/beta hydrolase fold-1 CDA09_09110 b17c39df310fa13428cd94363c0ed6be 293 PRINTS PR00111 Alpha/beta hydrolase fold signature 221 235 2.1E-5 T 01-11-2018 IPR000073 Alpha/beta hydrolase fold-1 CDA09_11195 7d697787dbeb79bdbcf35e914b1ad7f1 232 Gene3D G3DSA:1.10.1240.10 4 99 1.8E-22 T 01-11-2018 IPR036594 Methionine synthase domain Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 CDA09_11195 7d697787dbeb79bdbcf35e914b1ad7f1 232 SUPERFAMILY SSF47644 16 99 1.7E-19 T 01-11-2018 IPR036594 Methionine synthase domain Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 CDA09_11195 7d697787dbeb79bdbcf35e914b1ad7f1 232 Pfam PF02310 B12 binding domain 107 214 3.4E-25 T 01-11-2018 IPR006158 Cobalamin (vitamin B12)-binding domain GO:0031419|GO:0046872 Reactome: R-HSA-196741 CDA09_11195 7d697787dbeb79bdbcf35e914b1ad7f1 232 SMART SM01018 18 101 1.3E-24 T 01-11-2018 IPR003759 Cobalamin (vitamin B12)-binding module, cap domain Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 CDA09_11195 7d697787dbeb79bdbcf35e914b1ad7f1 232 Pfam PF02607 B12 binding domain 21 93 1.8E-15 T 01-11-2018 IPR003759 Cobalamin (vitamin B12)-binding module, cap domain Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 CDA09_11195 7d697787dbeb79bdbcf35e914b1ad7f1 232 Gene3D G3DSA:3.40.50.280 100 231 2.6E-45 T 01-11-2018 CDA09_11195 7d697787dbeb79bdbcf35e914b1ad7f1 232 SUPERFAMILY SSF52242 86 229 2.49E-45 T 01-11-2018 IPR036724 Cobalamin-binding domain superfamily GO:0031419|GO:0046872 Reactome: R-HSA-196741 CDA09_23000 e343a7a304dc47d44de8c553b096e239 704 PIRSF PIRSF037532 1 704 1.6E-229 T 01-11-2018 IPR017232 Signal transduction histidine kinase, nitrogen fixation and metabolism regulator CDA09_23000 e343a7a304dc47d44de8c553b096e239 704 SMART SM00387 593 701 1.3E-30 T 01-11-2018 IPR003594 Histidine kinase/HSP90-like ATPase CDA09_23000 e343a7a304dc47d44de8c553b096e239 704 SUPERFAMILY SSF47384 478 554 5.49E-11 T 01-11-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 CDA09_23000 e343a7a304dc47d44de8c553b096e239 704 SUPERFAMILY SSF55785 357 473 2.0E-8 T 01-11-2018 IPR035965 PAS domain superfamily CDA09_23000 e343a7a304dc47d44de8c553b096e239 704 SUPERFAMILY SSF158472 299 348 9.29E-9 T 01-11-2018 CDA09_23000 e343a7a304dc47d44de8c553b096e239 704 Gene3D G3DSA:1.10.287.130 477 552 1.5E-11 T 01-11-2018 CDA09_23000 e343a7a304dc47d44de8c553b096e239 704 PRINTS PR00344 Bacterial sensor protein C-terminal signature 661 679 9.2E-13 T 01-11-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 CDA09_23000 e343a7a304dc47d44de8c553b096e239 704 PRINTS PR00344 Bacterial sensor protein C-terminal signature 650 660 9.2E-13 T 01-11-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 CDA09_23000 e343a7a304dc47d44de8c553b096e239 704 PRINTS PR00344 Bacterial sensor protein C-terminal signature 632 646 9.2E-13 T 01-11-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 CDA09_23000 e343a7a304dc47d44de8c553b096e239 704 Gene3D G3DSA:3.30.565.10 558 703 1.7E-36 T 01-11-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily CDA09_23000 e343a7a304dc47d44de8c553b096e239 704 SUPERFAMILY SSF55874 544 699 1.7E-34 T 01-11-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily CDA09_23000 e343a7a304dc47d44de8c553b096e239 704 Gene3D G3DSA:1.20.1480.50 269 354 8.7E-11 T 01-11-2018 CDA09_23000 e343a7a304dc47d44de8c553b096e239 704 Pfam PF00512 His Kinase A (phospho-acceptor) domain 486 553 1.0E-8 T 01-11-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 CDA09_23000 e343a7a304dc47d44de8c553b096e239 704 Pfam PF00672 HAMP domain 299 348 7.7E-11 T 01-11-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 CDA09_23000 e343a7a304dc47d44de8c553b096e239 704 SMART SM00388 483 555 6.8E-11 T 01-11-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 CDA09_23000 e343a7a304dc47d44de8c553b096e239 704 Gene3D G3DSA:3.30.450.20 355 476 5.5E-5 T 01-11-2018 CDA09_23000 e343a7a304dc47d44de8c553b096e239 704 SMART SM00304 299 351 4.4E-10 T 01-11-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 CDA09_23000 e343a7a304dc47d44de8c553b096e239 704 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 593 699 1.3E-18 T 01-11-2018 IPR003594 Histidine kinase/HSP90-like ATPase CDA09_05320 e76286b617545fedffb6e3d30ca9c6c4 416 PIRSF PIRSF000412 1 416 4.4E-162 T 01-11-2018 IPR001085 Serine hydroxymethyltransferase GO:0004372|GO:0019264|GO:0030170|GO:0035999 KEGG: 00260+2.1.2.1|KEGG: 00460+2.1.2.1|KEGG: 00630+2.1.2.1|KEGG: 00670+2.1.2.1|KEGG: 00680+2.1.2.1|MetaCyc: PWY-1622|MetaCyc: PWY-181|MetaCyc: PWY-2161|MetaCyc: PWY-2201|MetaCyc: PWY-3661|MetaCyc: PWY-3661-1|MetaCyc: PWY-3841|MetaCyc: PWY-5497|Reactome: R-HSA-196757 CDA09_05320 e76286b617545fedffb6e3d30ca9c6c4 416 SUPERFAMILY SSF53383 4 415 1.21E-175 T 01-11-2018 IPR015424 Pyridoxal phosphate-dependent transferase CDA09_05320 e76286b617545fedffb6e3d30ca9c6c4 416 Pfam PF00464 Serine hydroxymethyltransferase 9 384 1.2E-168 T 01-11-2018 IPR039429 Serine hydroxymethyltransferase-like domain KEGG: 00260+2.1.2.1|KEGG: 00460+2.1.2.1|KEGG: 00630+2.1.2.1|KEGG: 00670+2.1.2.1|KEGG: 00680+2.1.2.1|MetaCyc: PWY-1622|MetaCyc: PWY-181|MetaCyc: PWY-2161|MetaCyc: PWY-2201|MetaCyc: PWY-3661|MetaCyc: PWY-3661-1|MetaCyc: PWY-3841|MetaCyc: PWY-5497|Reactome: R-HSA-196757 CDA09_05320 e76286b617545fedffb6e3d30ca9c6c4 416 Gene3D G3DSA:3.90.1150.10 10 393 9.4E-183 T 01-11-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 CDA09_05320 e76286b617545fedffb6e3d30ca9c6c4 416 ProSitePatterns PS00096 Serine hydroxymethyltransferase pyridoxal-phosphate attachment site. 221 237 - T 01-11-2018 IPR019798 Serine hydroxymethyltransferase, pyridoxal phosphate binding site GO:0030170 KEGG: 00260+2.1.2.1|KEGG: 00460+2.1.2.1|KEGG: 00630+2.1.2.1|KEGG: 00670+2.1.2.1|KEGG: 00680+2.1.2.1|MetaCyc: PWY-1622|MetaCyc: PWY-181|MetaCyc: PWY-2161|MetaCyc: PWY-2201|MetaCyc: PWY-3661|MetaCyc: PWY-3661-1|MetaCyc: PWY-3841|MetaCyc: PWY-5497|Reactome: R-HSA-196757 CDA09_05320 e76286b617545fedffb6e3d30ca9c6c4 416 Gene3D G3DSA:3.40.640.10 37 286 9.4E-183 T 01-11-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 CDA09_05320 e76286b617545fedffb6e3d30ca9c6c4 416 Hamap MF_00051 Serine hydroxymethyltransferase [glyA]. 7 415 51.615 T 01-11-2018 IPR001085 Serine hydroxymethyltransferase GO:0004372|GO:0019264|GO:0030170|GO:0035999 KEGG: 00260+2.1.2.1|KEGG: 00460+2.1.2.1|KEGG: 00630+2.1.2.1|KEGG: 00670+2.1.2.1|KEGG: 00680+2.1.2.1|MetaCyc: PWY-1622|MetaCyc: PWY-181|MetaCyc: PWY-2161|MetaCyc: PWY-2201|MetaCyc: PWY-3661|MetaCyc: PWY-3661-1|MetaCyc: PWY-3841|MetaCyc: PWY-5497|Reactome: R-HSA-196757 CDA09_10890 bf9f361db6df0c800ada0425309d5468 325 Pfam PF01244 Membrane dipeptidase (Peptidase family M19) 22 320 2.9E-92 T 01-11-2018 IPR008257 Peptidase M19 GO:0006508|GO:0016805 MetaCyc: PWY-7533|Reactome: R-HSA-2142691|Reactome: R-HSA-5423646 CDA09_10890 bf9f361db6df0c800ada0425309d5468 325 SUPERFAMILY SSF51556 8 324 1.96E-82 T 01-11-2018 IPR032466 Metal-dependent hydrolase CDA09_10890 bf9f361db6df0c800ada0425309d5468 325 Gene3D G3DSA:3.20.20.140 1 325 5.8E-124 T 01-11-2018 CDA09_08755 b4a459083b90a5d01acb1fba5f64680c 374 TIGRFAM TIGR02109 PQQ_syn_pqqE: coenzyme PQQ biosynthesis enzyme PqqE 10 355 1.3E-154 T 01-11-2018 IPR011843 Coenzyme PQQ biosynthesis protein E, bacteria GO:0018189|GO:0051539 CDA09_08755 b4a459083b90a5d01acb1fba5f64680c 374 Pfam PF04055 Radical SAM superfamily 20 173 2.5E-23 T 01-11-2018 IPR007197 Radical SAM GO:0003824|GO:0051536 CDA09_08755 b4a459083b90a5d01acb1fba5f64680c 374 Hamap MF_00660 Coenzyme PQQ synthesis protein E [pqqE]. 1 374 183.367 T 01-11-2018 IPR011843 Coenzyme PQQ biosynthesis protein E, bacteria GO:0018189|GO:0051539 CDA09_08755 b4a459083b90a5d01acb1fba5f64680c 374 PIRSF PIRSF037420 2 355 1.8E-107 T 01-11-2018 IPR017200 Coenzyme PQQ synthesis protein E CDA09_08755 b4a459083b90a5d01acb1fba5f64680c 374 Gene3D G3DSA:3.20.20.70 15 288 1.2E-41 T 01-11-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 CDA09_08755 b4a459083b90a5d01acb1fba5f64680c 374 TIGRFAM TIGR04085 rSAM_more_4Fe4S: radical SAM additional 4Fe4S-binding SPASM domain 250 335 1.5E-7 T 01-11-2018 IPR023885 4Fe4S-binding SPASM domain CDA09_08755 b4a459083b90a5d01acb1fba5f64680c 374 SUPERFAMILY SSF102114 12 317 5.36E-68 T 01-11-2018 CDA09_08755 b4a459083b90a5d01acb1fba5f64680c 374 Pfam PF13186 Iron-sulfur cluster-binding domain 243 308 2.3E-8 T 01-11-2018 IPR023885 4Fe4S-binding SPASM domain CDA09_08755 b4a459083b90a5d01acb1fba5f64680c 374 Pfam PF13394 4Fe-4S single cluster domain 23 80 1.6E-5 T 01-11-2018 CDA09_08755 b4a459083b90a5d01acb1fba5f64680c 374 SMART SM00729 14 216 0.001 T 01-11-2018 IPR006638 Elp3/MiaB/NifB GO:0003824|GO:0051536 CDA09_06180 c637ed8caa39540d74ab628f382f211c 150 SMART SM00116 83 130 1.5E-10 T 01-11-2018 IPR000644 CBS domain CDA09_06180 c637ed8caa39540d74ab628f382f211c 150 SMART SM00116 18 65 5.8E-4 T 01-11-2018 IPR000644 CBS domain CDA09_06180 c637ed8caa39540d74ab628f382f211c 150 SUPERFAMILY SSF54631 7 144 2.65E-35 T 01-11-2018 CDA09_06180 c637ed8caa39540d74ab628f382f211c 150 Pfam PF00571 CBS domain 76 129 1.4E-12 T 01-11-2018 IPR000644 CBS domain CDA09_06180 c637ed8caa39540d74ab628f382f211c 150 Pfam PF00571 CBS domain 20 65 1.9E-8 T 01-11-2018 IPR000644 CBS domain CDA09_06180 c637ed8caa39540d74ab628f382f211c 150 Gene3D G3DSA:3.10.580.10 1 146 6.5E-47 T 01-11-2018 CDA09_16345 a8df491a63befe3354bd5f3348404168 453 SUPERFAMILY SSF56112 8 282 1.48E-72 T 01-11-2018 IPR011009 Protein kinase-like domain superfamily CDA09_16345 a8df491a63befe3354bd5f3348404168 453 Gene3D G3DSA:2.60.120.10 292 432 1.3E-19 T 01-11-2018 IPR014710 RmlC-like jelly roll fold CDA09_16345 a8df491a63befe3354bd5f3348404168 453 PIRSF PIRSF000654 11 281 8.3E-25 T 01-11-2018 CDA09_16345 a8df491a63befe3354bd5f3348404168 453 ProSitePatterns PS00107 Protein kinases ATP-binding region signature. 17 40 - T 01-11-2018 IPR017441 Protein kinase, ATP binding site GO:0005524 CDA09_16345 a8df491a63befe3354bd5f3348404168 453 SMART SM00100 303 418 3.4E-9 T 01-11-2018 IPR000595 Cyclic nucleotide-binding domain CDA09_16345 a8df491a63befe3354bd5f3348404168 453 Gene3D G3DSA:3.30.200.20 2 96 2.0E-18 T 01-11-2018 CDA09_16345 a8df491a63befe3354bd5f3348404168 453 SUPERFAMILY SSF51206 295 419 7.46E-19 T 01-11-2018 IPR018490 Cyclic nucleotide-binding-like CDA09_16345 a8df491a63befe3354bd5f3348404168 453 SMART SM00220 11 278 1.2E-58 T 01-11-2018 IPR000719 Protein kinase domain GO:0004672|GO:0005524|GO:0006468 CDA09_16345 a8df491a63befe3354bd5f3348404168 453 Pfam PF00069 Protein kinase domain 11 265 5.5E-52 T 01-11-2018 IPR000719 Protein kinase domain GO:0004672|GO:0005524|GO:0006468 CDA09_16345 a8df491a63befe3354bd5f3348404168 453 ProSitePatterns PS00108 Serine/Threonine protein kinases active-site signature. 136 148 - T 01-11-2018 IPR008271 Serine/threonine-protein kinase, active site GO:0004672|GO:0006468 CDA09_16345 a8df491a63befe3354bd5f3348404168 453 Gene3D G3DSA:1.10.510.10 98 287 4.5E-47 T 01-11-2018 CDA09_16345 a8df491a63befe3354bd5f3348404168 453 Pfam PF00027 Cyclic nucleotide-binding domain 322 398 1.8E-9 T 01-11-2018 IPR000595 Cyclic nucleotide-binding domain CDA09_16730 82cb54f86fe24e89286b742b98dd0b3e 446 SUPERFAMILY SSF48019 244 426 5.21E-71 T 01-11-2018 IPR008921 DNA polymerase III, clamp loader complex, gamma/delta/delta subunit, C-terminal GO:0003677|GO:0006260 Reactome: R-HSA-110312|Reactome: R-HSA-110314|Reactome: R-HSA-110320|Reactome: R-HSA-174411|Reactome: R-HSA-5651801|Reactome: R-HSA-5655862|Reactome: R-HSA-5656121|Reactome: R-HSA-5656169|Reactome: R-HSA-5685942|Reactome: R-HSA-5696397|Reactome: R-HSA-5696400|Reactome: R-HSA-6782135|Reactome: R-HSA-6782210|Reactome: R-HSA-69091 CDA09_16730 82cb54f86fe24e89286b742b98dd0b3e 446 Gene3D G3DSA:1.20.272.10 234 337 1.6E-39 T 01-11-2018 CDA09_16730 82cb54f86fe24e89286b742b98dd0b3e 446 Gene3D G3DSA:1.10.3710.10 338 438 1.7E-34 T 01-11-2018 CDA09_16730 82cb54f86fe24e89286b742b98dd0b3e 446 Gene3D G3DSA:3.40.50.300 6 162 7.7E-45 T 01-11-2018 CDA09_16730 82cb54f86fe24e89286b742b98dd0b3e 446 SUPERFAMILY SSF52540 7 228 3.58E-42 T 01-11-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CDA09_16730 82cb54f86fe24e89286b742b98dd0b3e 446 Pfam PF12002 MgsA AAA+ ATPase C terminal 260 426 5.1E-63 T 01-11-2018 IPR021886 MgsA AAA+ ATPase C-terminal CDA09_16730 82cb54f86fe24e89286b742b98dd0b3e 446 Pfam PF16193 AAA C-terminal domain 183 259 1.7E-20 T 01-11-2018 IPR032423 AAA C-terminal domain CDA09_16730 82cb54f86fe24e89286b742b98dd0b3e 446 Pfam PF00004 ATPase family associated with various cellular activities (AAA) 52 158 1.4E-14 T 01-11-2018 IPR003959 ATPase, AAA-type, core GO:0005524 CDA09_16730 82cb54f86fe24e89286b742b98dd0b3e 446 SMART SM00382 48 164 4.9E-15 T 01-11-2018 IPR003593 AAA+ ATPase domain CDA09_14110 f56db42c77d880ffa687473b503db2ce 305 Pfam PF11660 Protein of unknown function (DUF3262) 236 304 1.9E-6 T 01-11-2018 IPR021676 Protein of unknown function DUF3262 CDA09_14110 f56db42c77d880ffa687473b503db2ce 305 Pfam PF01464 Transglycosylase SLT domain 27 107 6.3E-5 T 01-11-2018 IPR008258 Transglycosylase SLT domain 1 CDA09_14110 f56db42c77d880ffa687473b503db2ce 305 SUPERFAMILY SSF53955 26 158 1.76E-6 T 01-11-2018 IPR023346 Lysozyme-like domain superfamily CDA09_14110 f56db42c77d880ffa687473b503db2ce 305 Gene3D G3DSA:1.10.530.10 23 192 2.4E-8 T 01-11-2018 CDA09_20935 62c12f35a5349ed09df421deed88094b 119 Pfam PF01042 Endoribonuclease L-PSP 8 114 2.4E-22 T 01-11-2018 IPR006175 YjgF/YER057c/UK114 family Reactome: R-HSA-8849175 CDA09_20935 62c12f35a5349ed09df421deed88094b 119 Gene3D G3DSA:3.30.1330.40 1 117 2.5E-37 T 01-11-2018 IPR035959 RutC-like superfamily Reactome: R-HSA-8849175 CDA09_20935 62c12f35a5349ed09df421deed88094b 119 ProSitePatterns PS01094 Uncharacterized protein family UPF0076 signature. 90 109 - T 01-11-2018 IPR019897 RidA, conserved site Reactome: R-HSA-8849175 CDA09_20935 62c12f35a5349ed09df421deed88094b 119 SUPERFAMILY SSF55298 3 115 1.57E-29 T 01-11-2018 IPR035959 RutC-like superfamily Reactome: R-HSA-8849175 CDA09_19565 78ca17c5cc3a951536953c5b3ff1d344 124 Gene3D G3DSA:3.30.1390.10 54 124 2.2E-31 T 01-11-2018 IPR014719 Ribosomal protein L7/L12, C-terminal/adaptor protein ClpS-like CDA09_19565 78ca17c5cc3a951536953c5b3ff1d344 124 SUPERFAMILY SSF48300 4 60 4.19E-17 T 01-11-2018 IPR036235 Ribosomal protein L7/L12, oligomerisation domain superfamily GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 CDA09_19565 78ca17c5cc3a951536953c5b3ff1d344 124 Pfam PF00542 Ribosomal protein L7/L12 C-terminal domain 58 124 2.6E-30 T 01-11-2018 IPR013823 Ribosomal protein L7/L12, C-terminal GO:0003735|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 CDA09_19565 78ca17c5cc3a951536953c5b3ff1d344 124 TIGRFAM TIGR00855 L12: ribosomal protein bL12 1 124 1.3E-50 T 01-11-2018 IPR000206 Ribosomal protein L7/L12 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 CDA09_19565 78ca17c5cc3a951536953c5b3ff1d344 124 Pfam PF16320 Ribosomal protein L7/L12 dimerisation domain 5 52 1.0E-18 T 01-11-2018 IPR008932 Ribosomal protein L7/L12, oligomerisation GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 CDA09_19565 78ca17c5cc3a951536953c5b3ff1d344 124 SUPERFAMILY SSF54736 53 124 6.98E-25 T 01-11-2018 IPR014719 Ribosomal protein L7/L12, C-terminal/adaptor protein ClpS-like CDA09_19565 78ca17c5cc3a951536953c5b3ff1d344 124 Hamap MF_00368 50S ribosomal protein L7/L12 [rplL]. 2 124 25.491 T 01-11-2018 IPR000206 Ribosomal protein L7/L12 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 CDA09_19565 78ca17c5cc3a951536953c5b3ff1d344 124 ProDom PD001326 RIBOSOMAL L7/L12 50S RIBONUCLEOPROTEIN CHLOROPLAST L12 PLASTID DIRECT SEQUENCING PEPTIDE 59 124 2.0E-24 T 01-11-2018 IPR013823 Ribosomal protein L7/L12, C-terminal GO:0003735|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 CDA09_19565 78ca17c5cc3a951536953c5b3ff1d344 124 Gene3D G3DSA:1.20.5.710 2 53 1.1E-21 T 01-11-2018 CDA09_04260 5c9343abe7f18267fa4b83ec922d72ab 298 Gene3D G3DSA:3.40.50.300 2 236 2.2E-63 T 01-11-2018 CDA09_04260 5c9343abe7f18267fa4b83ec922d72ab 298 ProSitePatterns PS00211 ABC transporters family signature. 135 149 - T 01-11-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 CDA09_04260 5c9343abe7f18267fa4b83ec922d72ab 298 Pfam PF00005 ABC transporter 22 163 8.3E-30 T 01-11-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 CDA09_04260 5c9343abe7f18267fa4b83ec922d72ab 298 SUPERFAMILY SSF52540 5 228 7.5E-61 T 01-11-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CDA09_04260 5c9343abe7f18267fa4b83ec922d72ab 298 SMART SM00382 30 210 9.7E-13 T 01-11-2018 IPR003593 AAA+ ATPase domain CDA09_05610 5d611989ea472d9c8feeda886266ed0b 137 Gene3D G3DSA:3.10.180.10 7 137 2.8E-49 T 01-11-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase CDA09_05610 5d611989ea472d9c8feeda886266ed0b 137 Pfam PF06983 3-demethylubiquinone-9 3-methyltransferase 3 131 1.4E-12 T 01-11-2018 IPR028973 PhnB-like CDA09_05610 5d611989ea472d9c8feeda886266ed0b 137 SUPERFAMILY SSF54593 1 134 7.77E-37 T 01-11-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase CDA09_10505 1aa5b607a311e756fd0a0c89a071ef71 553 Pfam PF00171 Aldehyde dehydrogenase family 90 500 2.2E-33 T 01-11-2018 IPR015590 Aldehyde dehydrogenase domain GO:0016491|GO:0055114 CDA09_10505 1aa5b607a311e756fd0a0c89a071ef71 553 Gene3D G3DSA:3.40.309.10 311 526 9.8E-21 T 01-11-2018 IPR016163 Aldehyde dehydrogenase, C-terminal GO:0016491|GO:0016620|GO:0055114 CDA09_10505 1aa5b607a311e756fd0a0c89a071ef71 553 Gene3D G3DSA:3.40.605.10 82 308 6.7E-27 T 01-11-2018 IPR016162 Aldehyde dehydrogenase, N-terminal GO:0016491|GO:0055114 CDA09_10505 1aa5b607a311e756fd0a0c89a071ef71 553 SUPERFAMILY SSF53720 81 535 6.68E-59 T 01-11-2018 IPR016161 Aldehyde/histidinol dehydrogenase GO:0016491|GO:0055114 CDA09_10505 1aa5b607a311e756fd0a0c89a071ef71 553 TIGRFAM TIGR02288 PaaN_2: phenylacetic acid degradation protein paaN 3 551 2.2E-270 T 01-11-2018 IPR011975 Phenylacetic acid degradation protein PaaN2 CDA09_11850 3a6166cb7fd980302b9e1ec8bac9e49b 367 Pfam PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) 162 366 6.2E-45 T 01-11-2018 IPR001078 2-oxoacid dehydrogenase acyltransferase, catalytic domain GO:0016746 Reactome: R-HSA-389661 CDA09_11850 3a6166cb7fd980302b9e1ec8bac9e49b 367 Gene3D G3DSA:2.40.50.100 1 86 1.3E-21 T 01-11-2018 CDA09_11850 3a6166cb7fd980302b9e1ec8bac9e49b 367 SUPERFAMILY SSF51230 2 83 3.01E-23 T 01-11-2018 IPR011053 Single hybrid motif CDA09_11850 3a6166cb7fd980302b9e1ec8bac9e49b 367 SUPERFAMILY SSF52777 162 366 9.34E-53 T 01-11-2018 CDA09_11850 3a6166cb7fd980302b9e1ec8bac9e49b 367 Gene3D G3DSA:4.10.320.10 110 151 3.7E-12 T 01-11-2018 IPR036625 E3-binding domain superfamily GO:0016746 Reactome: R-HSA-389661 CDA09_11850 3a6166cb7fd980302b9e1ec8bac9e49b 367 ProSitePatterns PS00189 2-oxo acid dehydrogenases acyltransferase component lipoyl binding site. 26 55 - T 01-11-2018 IPR003016 2-oxo acid dehydrogenase, lipoyl-binding site Reactome: R-HSA-389661 CDA09_11850 3a6166cb7fd980302b9e1ec8bac9e49b 367 SUPERFAMILY SSF47005 110 150 7.06E-9 T 01-11-2018 IPR036625 E3-binding domain superfamily GO:0016746 Reactome: R-HSA-389661 CDA09_11850 3a6166cb7fd980302b9e1ec8bac9e49b 367 Gene3D G3DSA:3.30.559.10 157 366 6.8E-48 T 01-11-2018 IPR023213 Chloramphenicol acetyltransferase-like domain superfamily Reactome: R-HSA-389661 CDA09_11850 3a6166cb7fd980302b9e1ec8bac9e49b 367 Pfam PF02817 e3 binding domain 112 147 6.1E-11 T 01-11-2018 IPR004167 Peripheral subunit-binding domain GO:0016746 Reactome: R-HSA-389661 CDA09_11850 3a6166cb7fd980302b9e1ec8bac9e49b 367 Pfam PF00364 Biotin-requiring enzyme 4 73 4.2E-19 T 01-11-2018 IPR000089 Biotin/lipoyl attachment CDA09_13730 cf92dc468cfefcad05cffd5080cee9c7 1185 Pfam PF01558 Pyruvate ferredoxin/flavodoxin oxidoreductase 751 937 8.2E-23 T 01-11-2018 IPR019752 Pyruvate/ketoisovalerate oxidoreductase, catalytic domain GO:0016903|GO:0055114 CDA09_13730 cf92dc468cfefcad05cffd5080cee9c7 1185 SUPERFAMILY SSF52922 276 416 4.08E-6 T 01-11-2018 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II GO:0003824 CDA09_13730 cf92dc468cfefcad05cffd5080cee9c7 1185 Gene3D G3DSA:3.40.50.970 16 232 1.9E-28 T 01-11-2018 CDA09_13730 cf92dc468cfefcad05cffd5080cee9c7 1185 SUPERFAMILY SSF53323 744 958 7.72E-31 T 01-11-2018 IPR002869 Pyruvate-flavodoxin oxidoreductase, central domain GO:0016491|GO:0055114 CDA09_13730 cf92dc468cfefcad05cffd5080cee9c7 1185 Gene3D G3DSA:3.40.920.10 742 943 3.2E-17 T 01-11-2018 IPR002869 Pyruvate-flavodoxin oxidoreductase, central domain GO:0016491|GO:0055114 CDA09_13730 cf92dc468cfefcad05cffd5080cee9c7 1185 SUPERFAMILY SSF52518 28 210 1.71E-19 T 01-11-2018 IPR029061 Thiamin diphosphate-binding fold CDA09_13730 cf92dc468cfefcad05cffd5080cee9c7 1185 SUPERFAMILY SSF52518 457 644 1.03E-14 T 01-11-2018 IPR029061 Thiamin diphosphate-binding fold CDA09_13730 cf92dc468cfefcad05cffd5080cee9c7 1185 Pfam PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain 477 620 3.5E-6 T 01-11-2018 IPR011766 Thiamine pyrophosphate enzyme, C-terminal TPP-binding GO:0003824|GO:0030976 CDA09_09680 cf1cc83efb695094263c529af574deb5 368 SUPERFAMILY SSF55961 131 343 6.78E-19 T 01-11-2018 CDA09_09680 cf1cc83efb695094263c529af574deb5 368 SUPERFAMILY SSF50022 12 140 3.4E-26 T 01-11-2018 IPR036922 Rieske [2Fe-2S] iron-sulphur domain superfamily GO:0016491|GO:0051537|GO:0055114 CDA09_09680 cf1cc83efb695094263c529af574deb5 368 Pfam PF00355 Rieske [2Fe-2S] domain 18 111 2.8E-14 T 01-11-2018 IPR017941 Rieske [2Fe-2S] iron-sulphur domain GO:0016491|GO:0051537|GO:0055114 CDA09_09680 cf1cc83efb695094263c529af574deb5 368 Gene3D G3DSA:3.30.530.90 163 351 3.8E-47 T 01-11-2018 CDA09_09680 cf1cc83efb695094263c529af574deb5 368 Gene3D G3DSA:2.102.10.10 13 162 1.8E-39 T 01-11-2018 IPR036922 Rieske [2Fe-2S] iron-sulphur domain superfamily GO:0016491|GO:0051537|GO:0055114 CDA09_15210 0b01a288cbfc13dda11a677fdcc55894 308 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 20 180 4.2E-31 T 01-11-2018 IPR005225 Small GTP-binding protein domain GO:0005525 CDA09_15210 0b01a288cbfc13dda11a677fdcc55894 308 Gene3D G3DSA:3.40.50.300 18 195 1.0E-47 T 01-11-2018 CDA09_15210 0b01a288cbfc13dda11a677fdcc55894 308 TIGRFAM TIGR00436 era: GTP-binding protein Era 21 290 9.8E-87 T 01-11-2018 IPR005662 GTP-binding protein Era GO:0003723|GO:0005525|GO:0005622 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 CDA09_15210 0b01a288cbfc13dda11a677fdcc55894 308 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 91 109 4.3E-6 T 01-11-2018 IPR006073 GTP binding domain GO:0005525 CDA09_15210 0b01a288cbfc13dda11a677fdcc55894 308 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 23 43 4.3E-6 T 01-11-2018 IPR006073 GTP binding domain GO:0005525 CDA09_15210 0b01a288cbfc13dda11a677fdcc55894 308 Gene3D G3DSA:3.30.300.20 197 308 3.0E-39 T 01-11-2018 IPR015946 K homology domain-like, alpha/beta CDA09_15210 0b01a288cbfc13dda11a677fdcc55894 308 Pfam PF01926 50S ribosome-binding GTPase 23 136 1.0E-24 T 01-11-2018 IPR006073 GTP binding domain GO:0005525 CDA09_15210 0b01a288cbfc13dda11a677fdcc55894 308 Hamap MF_00367 GTPase Era [era]. 18 307 36.392 T 01-11-2018 IPR005662 GTP-binding protein Era GO:0003723|GO:0005525|GO:0005622 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 CDA09_15210 0b01a288cbfc13dda11a677fdcc55894 308 SUPERFAMILY SSF54814 193 308 3.07E-40 T 01-11-2018 IPR009019 K homology domain superfamily, prokaryotic type GO:0003723 CDA09_15210 0b01a288cbfc13dda11a677fdcc55894 308 Pfam PF07650 KH domain 220 295 1.1E-18 T 01-11-2018 IPR004044 K Homology domain, type 2 GO:0003723 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 CDA09_15210 0b01a288cbfc13dda11a677fdcc55894 308 SUPERFAMILY SSF52540 23 214 2.78E-41 T 01-11-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CDA09_12810 e32c432c055021ff356b4eaec40196f4 734 Pfam PF04607 Region found in RelA / SpoT proteins 253 363 1.4E-35 T 01-11-2018 IPR007685 RelA/SpoT GO:0015969 CDA09_12810 e32c432c055021ff356b4eaec40196f4 734 SUPERFAMILY SSF109604 19 208 4.71E-48 T 01-11-2018 CDA09_12810 e32c432c055021ff356b4eaec40196f4 734 Pfam PF02824 TGS domain 406 463 3.5E-23 T 01-11-2018 IPR004095 TGS KEGG: 00970+6.1.1.3 CDA09_12810 e32c432c055021ff356b4eaec40196f4 734 Pfam PF13328 HD domain 35 194 1.3E-50 T 01-11-2018 IPR003607 HD/PDEase domain CDA09_12810 e32c432c055021ff356b4eaec40196f4 734 Gene3D G3DSA:3.30.70.260 658 734 4.4E-17 T 01-11-2018 CDA09_12810 e32c432c055021ff356b4eaec40196f4 734 Gene3D G3DSA:1.10.3210.10 8 209 3.0E-47 T 01-11-2018 CDA09_12810 e32c432c055021ff356b4eaec40196f4 734 SUPERFAMILY SSF55021 657 733 2.54E-13 T 01-11-2018 CDA09_12810 e32c432c055021ff356b4eaec40196f4 734 SMART SM00954 253 363 5.0E-63 T 01-11-2018 IPR007685 RelA/SpoT GO:0015969 CDA09_12810 e32c432c055021ff356b4eaec40196f4 734 Pfam PF13291 ACT domain 658 733 7.3E-18 T 01-11-2018 IPR002912 ACT domain CDA09_12810 e32c432c055021ff356b4eaec40196f4 734 Gene3D G3DSA:3.10.20.30 401 469 7.7E-28 T 01-11-2018 IPR012675 Beta-grasp domain superfamily CDA09_12810 e32c432c055021ff356b4eaec40196f4 734 TIGRFAM TIGR00691 spoT_relA: RelA/SpoT family protein 37 733 1.0E-181 T 01-11-2018 IPR004811 RelA/SpoT family GO:0015969 CDA09_12810 e32c432c055021ff356b4eaec40196f4 734 SUPERFAMILY SSF81301 210 383 1.13E-60 T 01-11-2018 CDA09_12810 e32c432c055021ff356b4eaec40196f4 734 Gene3D G3DSA:3.30.460.10 211 343 3.3E-48 T 01-11-2018 CDA09_12810 e32c432c055021ff356b4eaec40196f4 734 SUPERFAMILY SSF81271 393 463 1.72E-19 T 01-11-2018 IPR012676 TGS-like KEGG: 00970+6.1.1.3 CDA09_11285 5653fbbd5be53436272f8764a3a7e40a 130 TIGRFAM TIGR00526 folB_dom: FolB domain 1 114 2.1E-19 T 01-11-2018 IPR006157 Dihydroneopterin aldolase/epimerase domain GO:0004150|GO:0006760 KEGG: 00790+4.1.2.25|MetaCyc: PWY-6147|MetaCyc: PWY-6148|MetaCyc: PWY-6797|MetaCyc: PWY-7539 CDA09_11285 5653fbbd5be53436272f8764a3a7e40a 130 SMART SM00905 4 113 1.1E-28 T 01-11-2018 IPR006157 Dihydroneopterin aldolase/epimerase domain GO:0004150|GO:0006760 KEGG: 00790+4.1.2.25|MetaCyc: PWY-6147|MetaCyc: PWY-6148|MetaCyc: PWY-6797|MetaCyc: PWY-7539 CDA09_11285 5653fbbd5be53436272f8764a3a7e40a 130 Gene3D G3DSA:3.30.1130.10 1 115 3.7E-28 T 01-11-2018 CDA09_11285 5653fbbd5be53436272f8764a3a7e40a 130 SUPERFAMILY SSF55620 1 114 4.73E-26 T 01-11-2018 CDA09_11285 5653fbbd5be53436272f8764a3a7e40a 130 Pfam PF02152 Dihydroneopterin aldolase 4 112 2.2E-22 T 01-11-2018 IPR006157 Dihydroneopterin aldolase/epimerase domain GO:0004150|GO:0006760 KEGG: 00790+4.1.2.25|MetaCyc: PWY-6147|MetaCyc: PWY-6148|MetaCyc: PWY-6797|MetaCyc: PWY-7539 CDA09_02710 345b6ad41c5b307dfaac78f04e804222 725 Pfam PF04055 Radical SAM superfamily 357 562 3.2E-18 T 01-11-2018 IPR007197 Radical SAM GO:0003824|GO:0051536 CDA09_02710 345b6ad41c5b307dfaac78f04e804222 725 SMART SM00729 353 606 2.8E-5 T 01-11-2018 IPR006638 Elp3/MiaB/NifB GO:0003824|GO:0051536 CDA09_02710 345b6ad41c5b307dfaac78f04e804222 725 SUPERFAMILY SSF102114 338 590 6.28E-14 T 01-11-2018 CDA09_02710 345b6ad41c5b307dfaac78f04e804222 725 Pfam PF11842 Domain of unknown function (DUF3362) 571 709 4.5E-45 T 01-11-2018 IPR024560 Uncharacterised protein family UPF0313, C-terminal CDA09_02710 345b6ad41c5b307dfaac78f04e804222 725 TIGRFAM TIGR03904 SAM_YgiQ: uncharacterized radical SAM protein YgiQ 1 621 5.9E-253 T 01-11-2018 IPR022946 Uncharacterised protein family UPF0313 CDA09_02710 345b6ad41c5b307dfaac78f04e804222 725 Gene3D G3DSA:3.80.30.20 353 611 3.5E-14 T 01-11-2018 IPR023404 Radical SAM, alpha/beta horseshoe CDA09_02710 345b6ad41c5b307dfaac78f04e804222 725 ProSitePatterns PS01278 Methylthiotransferase radical SAM domain signature. 357 377 - T 01-11-2018 IPR020612 Methylthiotransferase, conserved site GO:0051539 CDA09_02710 345b6ad41c5b307dfaac78f04e804222 725 Pfam PF08497 Radical SAM N-terminal 1 356 2.1E-135 T 01-11-2018 IPR013704 Uncharacterised protein family UPF0313, N-terminal CDA09_02710 345b6ad41c5b307dfaac78f04e804222 725 Hamap MF_01251 UPF0313 protein YgiQ [ygiQ]. 1 623 47.768 T 01-11-2018 IPR022946 Uncharacterised protein family UPF0313 CDA09_00135 f56e0bd0c6d33824d685f4bea6408aac 136 Gene3D G3DSA:1.20.120.50 1 135 1.9E-31 T 01-11-2018 IPR035938 Hemerythrin-like superfamily CDA09_00135 f56e0bd0c6d33824d685f4bea6408aac 136 SUPERFAMILY SSF47188 1 132 9.68E-26 T 01-11-2018 IPR035938 Hemerythrin-like superfamily CDA09_00135 f56e0bd0c6d33824d685f4bea6408aac 136 Pfam PF01814 Hemerythrin HHE cation binding domain 15 132 2.3E-13 T 01-11-2018 IPR012312 Haemerythrin-like Reactome: R-HSA-390471|Reactome: R-HSA-8951664|Reactome: R-HSA-917937|Reactome: R-HSA-983168 CDA09_00135 f56e0bd0c6d33824d685f4bea6408aac 136 TIGRFAM TIGR02481 hemeryth_dom: hemerythrin-like metal-binding domain 5 132 1.4E-27 T 01-11-2018 IPR012827 Haemerythrin, metal-binding domain GO:0046872 CDA09_21750 3c5e96d2c44f0888886bc49fe792956d 378 SUPERFAMILY SSF56645 2 241 7.59E-77 T 01-11-2018 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain superfamily GO:0016627|GO:0055114 CDA09_21750 3c5e96d2c44f0888886bc49fe792956d 378 Gene3D G3DSA:1.20.140.10 233 378 3.1E-55 T 01-11-2018 CDA09_21750 3c5e96d2c44f0888886bc49fe792956d 378 Gene3D G3DSA:2.40.110.10 119 232 3.3E-41 T 01-11-2018 CDA09_21750 3c5e96d2c44f0888886bc49fe792956d 378 SUPERFAMILY SSF47203 227 378 1.35E-57 T 01-11-2018 IPR036250 Acyl-CoA dehydrogenase-like, C-terminal GO:0016627|GO:0055114 CDA09_21750 3c5e96d2c44f0888886bc49fe792956d 378 ProSitePatterns PS00072 Acyl-CoA dehydrogenases signature 1. 122 134 - T 01-11-2018 IPR006089 Acyl-CoA dehydrogenase, conserved site GO:0003995|GO:0055114 CDA09_21750 3c5e96d2c44f0888886bc49fe792956d 378 PIRSF PIRSF016578 3 90 6.6E-8 T 01-11-2018 CDA09_21750 3c5e96d2c44f0888886bc49fe792956d 378 PIRSF PIRSF016578 125 378 3.6E-14 T 01-11-2018 CDA09_21750 3c5e96d2c44f0888886bc49fe792956d 378 Pfam PF02770 Acyl-CoA dehydrogenase, middle domain 120 216 2.9E-27 T 01-11-2018 IPR006091 Acyl-CoA oxidase/dehydrogenase, central domain GO:0016627|GO:0055114 CDA09_21750 3c5e96d2c44f0888886bc49fe792956d 378 Pfam PF02771 Acyl-CoA dehydrogenase, N-terminal domain 4 116 5.3E-30 T 01-11-2018 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal GO:0016627|GO:0050660|GO:0055114 CDA09_21750 3c5e96d2c44f0888886bc49fe792956d 378 Gene3D G3DSA:1.10.540.10 1 118 2.4E-37 T 01-11-2018 IPR037069 Acyl-CoA dehydrogenase/oxidase, N-terminal domain superfamily GO:0016627|GO:0050660|GO:0055114 CDA09_21750 3c5e96d2c44f0888886bc49fe792956d 378 Pfam PF00441 Acyl-CoA dehydrogenase, C-terminal domain 228 376 1.8E-48 T 01-11-2018 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal GO:0016627|GO:0055114 CDA09_21750 3c5e96d2c44f0888886bc49fe792956d 378 ProSitePatterns PS00073 Acyl-CoA dehydrogenases signature 2. 335 354 - T 01-11-2018 IPR006089 Acyl-CoA dehydrogenase, conserved site GO:0003995|GO:0055114 CDA09_10665 074ebe83c81bafe5bc2ebeb47e9c11ff 204 Pfam PF08281 Sigma-70, region 4 139 186 1.8E-9 T 01-11-2018 IPR013249 RNA polymerase sigma factor 70, region 4 type 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 CDA09_10665 074ebe83c81bafe5bc2ebeb47e9c11ff 204 TIGRFAM TIGR02937 sigma70-ECF: RNA polymerase sigma factor, sigma-70 family 22 193 1.4E-21 T 01-11-2018 IPR014284 RNA polymerase sigma-70 like domain GO:0003700|GO:0006352|GO:0006355 CDA09_10665 074ebe83c81bafe5bc2ebeb47e9c11ff 204 Gene3D G3DSA:1.10.1740.10 15 80 3.0E-15 T 01-11-2018 CDA09_10665 074ebe83c81bafe5bc2ebeb47e9c11ff 204 TIGRFAM TIGR02943 Sig70_famx1: RNA polymerase sigma-70 factor, TIGR02943 family 14 200 1.0E-74 T 01-11-2018 IPR014289 RNA polymerase sigma-24-related CDA09_10665 074ebe83c81bafe5bc2ebeb47e9c11ff 204 SUPERFAMILY SSF88946 21 95 2.25E-16 T 01-11-2018 IPR013325 RNA polymerase sigma factor, region 2 GO:0003700|GO:0006352|GO:0006355 CDA09_10665 074ebe83c81bafe5bc2ebeb47e9c11ff 204 Gene3D G3DSA:1.10.10.10 120 196 9.0E-11 T 01-11-2018 IPR036388 Winged helix-like DNA-binding domain superfamily CDA09_10665 074ebe83c81bafe5bc2ebeb47e9c11ff 204 Pfam PF04542 Sigma-70 region 2 22 84 3.6E-12 T 01-11-2018 IPR007627 RNA polymerase sigma-70 region 2 GO:0003700|GO:0006352|GO:0006355 CDA09_10665 074ebe83c81bafe5bc2ebeb47e9c11ff 204 SUPERFAMILY SSF88659 125 194 3.92E-12 T 01-11-2018 IPR013324 RNA polymerase sigma factor, region 3/4-like CDA09_08395 49b11bd3eb745cac67f2094cc7a5536b 466 Gene3D G3DSA:1.20.89.10 266 434 1.2E-120 T 01-11-2018 CDA09_08395 49b11bd3eb745cac67f2094cc7a5536b 466 Pfam PF00148 Nitrogenase component 1 type Oxidoreductase 19 429 1.5E-112 T 01-11-2018 IPR000510 Nitrogenase/oxidoreductase, component 1 GO:0016491|GO:0055114 CDA09_08395 49b11bd3eb745cac67f2094cc7a5536b 466 TIGRFAM TIGR01285 nifN: nitrogenase molybdenum-iron cofactor biosynthesis protein NifN 2 431 1.7E-179 T 01-11-2018 IPR005975 Nitrogenase molybdenum-iron cofactor biosynthesis protein GO:0009399|GO:0065003 CDA09_08395 49b11bd3eb745cac67f2094cc7a5536b 466 Gene3D G3DSA:3.40.50.1980 8 412 1.2E-120 T 01-11-2018 CDA09_08395 49b11bd3eb745cac67f2094cc7a5536b 466 Gene3D G3DSA:3.40.50.1980 19 159 1.2E-120 T 01-11-2018 CDA09_08395 49b11bd3eb745cac67f2094cc7a5536b 466 ProSitePatterns PS00699 Nitrogenases component 1 alpha and beta subunits signature 1. 37 44 - T 01-11-2018 IPR000318 Nitrogenase component 1, conserved site GO:0009399|GO:0016163 CDA09_08395 49b11bd3eb745cac67f2094cc7a5536b 466 Gene3D G3DSA:3.40.50.1980 160 419 1.2E-120 T 01-11-2018 CDA09_08395 49b11bd3eb745cac67f2094cc7a5536b 466 SUPERFAMILY SSF53807 7 436 2.68E-131 T 01-11-2018 CDA09_00585 238382f464f34c0a417053cb10586a28 659 Gene3D G3DSA:3.40.710.10 245 617 2.9E-106 T 01-11-2018 CDA09_00585 238382f464f34c0a417053cb10586a28 659 TIGRFAM TIGR03423 pbp2_mrdA: penicillin-binding protein 2 16 610 2.0E-237 T 01-11-2018 IPR017790 Penicillin-binding protein 2 GO:0008658|GO:0009002|GO:0009252|GO:0016020 KEGG: 00550+3.4.16.4|MetaCyc: PWY-5265|MetaCyc: PWY-6471 CDA09_00585 238382f464f34c0a417053cb10586a28 659 SUPERFAMILY SSF56601 251 610 1.33E-105 T 01-11-2018 IPR012338 Beta-lactamase/transpeptidase-like CDA09_00585 238382f464f34c0a417053cb10586a28 659 Gene3D G3DSA:3.30.1390.30 82 157 2.4E-44 T 01-11-2018 CDA09_00585 238382f464f34c0a417053cb10586a28 659 Gene3D G3DSA:3.90.1310.10 62 244 2.4E-44 T 01-11-2018 CDA09_00585 238382f464f34c0a417053cb10586a28 659 Pfam PF03717 Penicillin-binding Protein dimerisation domain 61 236 4.9E-44 T 01-11-2018 IPR005311 Penicillin-binding protein, dimerisation domain GO:0008658 CDA09_00585 238382f464f34c0a417053cb10586a28 659 Pfam PF00905 Penicillin binding protein transpeptidase domain 268 607 8.6E-80 T 01-11-2018 IPR001460 Penicillin-binding protein, transpeptidase GO:0008658 CDA09_00585 238382f464f34c0a417053cb10586a28 659 Hamap MF_02081 Peptidoglycan D,D-transpeptidase MrdA [mrdA]. 3 614 49.312 T 01-11-2018 IPR017790 Penicillin-binding protein 2 GO:0008658|GO:0009002|GO:0009252|GO:0016020 KEGG: 00550+3.4.16.4|MetaCyc: PWY-5265|MetaCyc: PWY-6471 CDA09_00585 238382f464f34c0a417053cb10586a28 659 SUPERFAMILY SSF56519 53 250 1.7E-49 T 01-11-2018 IPR036138 Penicillin-binding protein, dimerisation domain superfamily GO:0008658 CDA09_10240 37058240894ea2a7c5c87580d95566f7 560 PRINTS PR01590 FIS bacterial regulatory protein HTH signature 541 560 6.2E-10 T 01-11-2018 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 CDA09_10240 37058240894ea2a7c5c87580d95566f7 560 PRINTS PR01590 FIS bacterial regulatory protein HTH signature 524 541 6.2E-10 T 01-11-2018 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 CDA09_10240 37058240894ea2a7c5c87580d95566f7 560 Gene3D G3DSA:3.40.50.300 220 400 4.3E-66 T 01-11-2018 CDA09_10240 37058240894ea2a7c5c87580d95566f7 560 SMART SM00382 250 393 1.9E-11 T 01-11-2018 IPR003593 AAA+ ATPase domain CDA09_10240 37058240894ea2a7c5c87580d95566f7 560 SUPERFAMILY SSF46689 443 557 5.82E-10 T 01-11-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 CDA09_10240 37058240894ea2a7c5c87580d95566f7 560 Pfam PF02830 V4R domain 123 184 9.8E-18 T 01-11-2018 IPR004096 4-vinyl reductase, 4VR CDA09_10240 37058240894ea2a7c5c87580d95566f7 560 Gene3D G3DSA:1.10.8.60 401 467 2.3E-21 T 01-11-2018 CDA09_10240 37058240894ea2a7c5c87580d95566f7 560 ProSitePatterns PS00688 Sigma-54 interaction domain C-terminal part signature. 443 452 - T 01-11-2018 IPR025944 Sigma-54 interaction domain, conserved site CDA09_10240 37058240894ea2a7c5c87580d95566f7 560 ProDom PD485437 REGULATOR TRANSCRIPTIONAL FIS-TYPE HELIX-TURN-HELIX ACTIVATOR PLASMID FAMILY PHENOL-DEGRADATIVE FIS SIGMA-54 9 137 2.0E-39 T 01-11-2018 IPR010523 Activator of aromatic catabolism CDA09_10240 37058240894ea2a7c5c87580d95566f7 560 Gene3D G3DSA:1.10.10.60 509 559 2.0E-9 T 01-11-2018 CDA09_10240 37058240894ea2a7c5c87580d95566f7 560 Pfam PF06505 Activator of aromatic catabolism 11 111 1.9E-39 T 01-11-2018 IPR010523 Activator of aromatic catabolism CDA09_10240 37058240894ea2a7c5c87580d95566f7 560 Gene3D G3DSA:3.30.1380.20 32 188 8.8E-7 T 01-11-2018 CDA09_10240 37058240894ea2a7c5c87580d95566f7 560 SMART SM00989 122 184 2.4E-26 T 01-11-2018 IPR004096 4-vinyl reductase, 4VR CDA09_10240 37058240894ea2a7c5c87580d95566f7 560 Pfam PF00158 Sigma-54 interaction domain 230 396 6.8E-71 T 01-11-2018 IPR002078 RNA polymerase sigma factor 54 interaction domain GO:0005524|GO:0006355|GO:0008134 CDA09_10240 37058240894ea2a7c5c87580d95566f7 560 Pfam PF02954 Bacterial regulatory protein, Fis family 517 557 5.9E-13 T 01-11-2018 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 CDA09_10240 37058240894ea2a7c5c87580d95566f7 560 ProSitePatterns PS00676 Sigma-54 interaction domain ATP-binding region B signature. 316 331 - T 01-11-2018 IPR025943 Sigma-54 interaction domain, ATP-binding site 2 CDA09_10240 37058240894ea2a7c5c87580d95566f7 560 ProSitePatterns PS00675 Sigma-54 interaction domain ATP-binding region A signature. 254 267 - T 01-11-2018 IPR025662 Sigma-54 interaction domain, ATP-binding site 1 CDA09_10240 37058240894ea2a7c5c87580d95566f7 560 SUPERFAMILY SSF52540 230 472 5.32E-69 T 01-11-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CDA09_10240 37058240894ea2a7c5c87580d95566f7 560 SUPERFAMILY SSF111126 13 179 3.87E-14 T 01-11-2018 IPR024096 NO signalling/Golgi transport ligand-binding domain superfamily CDA09_16940 635f4cd0b81e566d7fd7c9b5c42bb259 192 SUPERFAMILY SSF54523 27 114 7.22E-17 T 01-11-2018 CDA09_16940 635f4cd0b81e566d7fd7c9b5c42bb259 192 TIGRFAM TIGR02532 IV_pilin_GFxxxE: prepilin-type N-terminal cleavage/methylation domain 24 46 2.3E-6 T 01-11-2018 IPR012902 Prokaryotic N-terminal methylation site CDA09_16940 635f4cd0b81e566d7fd7c9b5c42bb259 192 Gene3D G3DSA:3.30.700.10 26 178 1.7E-12 T 01-11-2018 CDA09_16940 635f4cd0b81e566d7fd7c9b5c42bb259 192 Pfam PF07963 Prokaryotic N-terminal methylation motif 22 45 1.2E-6 T 01-11-2018 IPR012902 Prokaryotic N-terminal methylation site CDA09_16940 635f4cd0b81e566d7fd7c9b5c42bb259 192 Pfam PF12019 Type II transport protein GspH 62 183 2.7E-19 T 01-11-2018 IPR022346 General secretion pathway, GspH GO:0008565|GO:0015627|GO:0015628 CDA09_08940 9eca7f0f94d0f204745aba547e64c274 919 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 797 907 1.1E-27 T 01-11-2018 IPR003594 Histidine kinase/HSP90-like ATPase CDA09_08940 9eca7f0f94d0f204745aba547e64c274 919 Pfam PF00512 His Kinase A (phospho-acceptor) domain 684 750 2.6E-18 T 01-11-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 CDA09_08940 9eca7f0f94d0f204745aba547e64c274 919 PRINTS PR00344 Bacterial sensor protein C-terminal signature 868 886 2.7E-16 T 01-11-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 CDA09_08940 9eca7f0f94d0f204745aba547e64c274 919 PRINTS PR00344 Bacterial sensor protein C-terminal signature 892 905 2.7E-16 T 01-11-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 CDA09_08940 9eca7f0f94d0f204745aba547e64c274 919 PRINTS PR00344 Bacterial sensor protein C-terminal signature 834 848 2.7E-16 T 01-11-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 CDA09_08940 9eca7f0f94d0f204745aba547e64c274 919 PRINTS PR00344 Bacterial sensor protein C-terminal signature 852 862 2.7E-16 T 01-11-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 CDA09_08940 9eca7f0f94d0f204745aba547e64c274 919 SUPERFAMILY SSF55874 739 906 5.24E-46 T 01-11-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily CDA09_08940 9eca7f0f94d0f204745aba547e64c274 919 SMART SM00387 796 908 5.8E-37 T 01-11-2018 IPR003594 Histidine kinase/HSP90-like ATPase CDA09_08940 9eca7f0f94d0f204745aba547e64c274 919 SUPERFAMILY SSF47384 668 751 7.85E-21 T 01-11-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 CDA09_08940 9eca7f0f94d0f204745aba547e64c274 919 Gene3D G3DSA:3.30.565.10 755 911 1.5E-43 T 01-11-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily CDA09_08940 9eca7f0f94d0f204745aba547e64c274 919 SMART SM00388 683 750 4.3E-22 T 01-11-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 CDA09_08940 9eca7f0f94d0f204745aba547e64c274 919 Gene3D G3DSA:1.10.287.130 666 752 8.3E-25 T 01-11-2018 CDA09_08940 9eca7f0f94d0f204745aba547e64c274 919 Gene3D G3DSA:1.20.1730.10 32 522 2.2E-11 T 01-11-2018 IPR038377 Sodium/glucose symporter superfamily CDA09_16600 9cd0bc160cc5b9c7808daaeece6b2bc4 329 TIGRFAM TIGR00005 rluA_subfam: pseudouridine synthase, RluA family 35 321 4.0E-97 T 01-11-2018 IPR006225 Pseudouridine synthase, RluC/RluD GO:0001522|GO:0003723|GO:0009451|GO:0009982 CDA09_16600 9cd0bc160cc5b9c7808daaeece6b2bc4 329 Pfam PF00849 RNA pseudouridylate synthase 111 261 2.3E-33 T 01-11-2018 IPR006145 Pseudouridine synthase, RsuA/RluB/C/D/E/F GO:0001522|GO:0003723|GO:0009451|GO:0009982 CDA09_16600 9cd0bc160cc5b9c7808daaeece6b2bc4 329 Pfam PF01479 S4 domain 38 81 3.1E-6 T 01-11-2018 IPR002942 RNA-binding S4 domain GO:0003723 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 CDA09_16600 9cd0bc160cc5b9c7808daaeece6b2bc4 329 Gene3D G3DSA:3.10.290.10 25 90 3.3E-16 T 01-11-2018 IPR036986 RNA-binding S4 domain superfamily GO:0003723 CDA09_16600 9cd0bc160cc5b9c7808daaeece6b2bc4 329 SUPERFAMILY SSF55120 97 322 6.58E-79 T 01-11-2018 IPR020103 Pseudouridine synthase, catalytic domain superfamily GO:0001522|GO:0003723|GO:0009451|GO:0009982 CDA09_16600 9cd0bc160cc5b9c7808daaeece6b2bc4 329 SUPERFAMILY SSF55174 36 87 2.69E-8 T 01-11-2018 CDA09_16600 9cd0bc160cc5b9c7808daaeece6b2bc4 329 ProSitePatterns PS01129 Rlu family of pseudouridine synthase signature. 154 168 - T 01-11-2018 IPR006224 Pseudouridine synthase, RluC/RluD, conserved site GO:0001522|GO:0003723|GO:0009451|GO:0009982 CDA09_16600 9cd0bc160cc5b9c7808daaeece6b2bc4 329 SMART SM00363 37 102 5.7E-5 T 01-11-2018 IPR002942 RNA-binding S4 domain GO:0003723 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 CDA09_16600 9cd0bc160cc5b9c7808daaeece6b2bc4 329 Gene3D G3DSA:3.30.2350.10 103 325 7.0E-76 T 01-11-2018 CDA09_06070 246a2305c48fbcc73214ac731cc487cd 83 Pfam PF00886 Ribosomal protein S16 8 68 4.6E-25 T 01-11-2018 IPR000307 Ribosomal protein S16 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 CDA09_06070 246a2305c48fbcc73214ac731cc487cd 83 SUPERFAMILY SSF54565 1 77 3.53E-29 T 01-11-2018 IPR023803 Ribosomal protein S16 domain superfamily Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 CDA09_06070 246a2305c48fbcc73214ac731cc487cd 83 Hamap MF_00385 30S ribosomal protein S16 [rpsP]. 1 78 23.612 T 01-11-2018 IPR000307 Ribosomal protein S16 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 CDA09_06070 246a2305c48fbcc73214ac731cc487cd 83 ProSitePatterns PS00732 Ribosomal protein S16 signature. 2 11 - T 01-11-2018 IPR020592 Ribosomal protein S16, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 CDA09_06070 246a2305c48fbcc73214ac731cc487cd 83 TIGRFAM TIGR00002 S16: ribosomal protein bS16 2 78 1.4E-28 T 01-11-2018 IPR000307 Ribosomal protein S16 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 CDA09_06070 246a2305c48fbcc73214ac731cc487cd 83 Gene3D G3DSA:3.30.1320.10 1 82 2.7E-31 T 01-11-2018 IPR023803 Ribosomal protein S16 domain superfamily Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 CDA09_22170 75a90c446c8fd3ab16f203129ba513b1 255 TIGRFAM TIGR03761 ICE_PFL4669: integrating conjugative element protein, PFL_4669 family 11 223 1.0E-87 T 01-11-2018 IPR014996 Integrating conjugative element protein, PFL4669 CDA09_22170 75a90c446c8fd3ab16f203129ba513b1 255 Pfam PF08900 Domain of unknown function (DUF1845) 10 220 2.4E-79 T 01-11-2018 IPR014996 Integrating conjugative element protein, PFL4669 CDA09_13355 cd6d1b05530eaa7a211e7d40b0777178 642 Gene3D G3DSA:3.30.565.10 2 235 5.5E-75 T 01-11-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily CDA09_13355 cd6d1b05530eaa7a211e7d40b0777178 642 Gene3D G3DSA:1.20.120.790 507 638 2.5E-47 T 01-11-2018 IPR037196 HSP90, C-terminal domain CDA09_13355 cd6d1b05530eaa7a211e7d40b0777178 642 SUPERFAMILY SSF55874 8 223 3.82E-65 T 01-11-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily CDA09_13355 cd6d1b05530eaa7a211e7d40b0777178 642 ProSitePatterns PS00298 Heat shock hsp90 proteins family signature. 28 37 - T 01-11-2018 IPR019805 Heat shock protein Hsp90, conserved site GO:0005524|GO:0006457|GO:0051082 CDA09_13355 cd6d1b05530eaa7a211e7d40b0777178 642 SUPERFAMILY SSF110942 526 637 6.54E-38 T 01-11-2018 IPR037196 HSP90, C-terminal domain CDA09_13355 cd6d1b05530eaa7a211e7d40b0777178 642 Gene3D G3DSA:3.40.50.11260 412 501 4.5E-33 T 01-11-2018 CDA09_13355 cd6d1b05530eaa7a211e7d40b0777178 642 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 31 190 3.8E-13 T 01-11-2018 IPR003594 Histidine kinase/HSP90-like ATPase CDA09_13355 cd6d1b05530eaa7a211e7d40b0777178 642 Hamap MF_00505 Chaperone protein HtpG [htpG]. 5 637 32.574 T 01-11-2018 IPR001404 Heat shock protein Hsp90 family GO:0005524|GO:0006457|GO:0051082 CDA09_13355 cd6d1b05530eaa7a211e7d40b0777178 642 PRINTS PR00775 90kDa heat shock protein signature 29 51 3.7E-60 T 01-11-2018 IPR020575 Heat shock protein Hsp90, N-terminal CDA09_13355 cd6d1b05530eaa7a211e7d40b0777178 642 PRINTS PR00775 90kDa heat shock protein signature 8 28 3.7E-60 T 01-11-2018 IPR020575 Heat shock protein Hsp90, N-terminal CDA09_13355 cd6d1b05530eaa7a211e7d40b0777178 642 PRINTS PR00775 90kDa heat shock protein signature 96 113 3.7E-60 T 01-11-2018 IPR020575 Heat shock protein Hsp90, N-terminal CDA09_13355 cd6d1b05530eaa7a211e7d40b0777178 642 PRINTS PR00775 90kDa heat shock protein signature 78 95 3.7E-60 T 01-11-2018 IPR020575 Heat shock protein Hsp90, N-terminal CDA09_13355 cd6d1b05530eaa7a211e7d40b0777178 642 PRINTS PR00775 90kDa heat shock protein signature 123 145 3.7E-60 T 01-11-2018 IPR020575 Heat shock protein Hsp90, N-terminal CDA09_13355 cd6d1b05530eaa7a211e7d40b0777178 642 PRINTS PR00775 90kDa heat shock protein signature 179 196 3.7E-60 T 01-11-2018 IPR020575 Heat shock protein Hsp90, N-terminal CDA09_13355 cd6d1b05530eaa7a211e7d40b0777178 642 PRINTS PR00775 90kDa heat shock protein signature 197 215 3.7E-60 T 01-11-2018 IPR020575 Heat shock protein Hsp90, N-terminal CDA09_13355 cd6d1b05530eaa7a211e7d40b0777178 642 PIRSF PIRSF002583 3 642 9.1E-212 T 01-11-2018 IPR001404 Heat shock protein Hsp90 family GO:0005524|GO:0006457|GO:0051082 CDA09_13355 cd6d1b05530eaa7a211e7d40b0777178 642 SMART SM00387 30 191 1.6E-6 T 01-11-2018 IPR003594 Histidine kinase/HSP90-like ATPase CDA09_13355 cd6d1b05530eaa7a211e7d40b0777178 642 Pfam PF00183 Hsp90 protein 221 637 3.7E-134 T 01-11-2018 IPR001404 Heat shock protein Hsp90 family GO:0005524|GO:0006457|GO:0051082 CDA09_13355 cd6d1b05530eaa7a211e7d40b0777178 642 Gene3D G3DSA:3.30.230.80 240 411 2.3E-67 T 01-11-2018 CDA09_13355 cd6d1b05530eaa7a211e7d40b0777178 642 SUPERFAMILY SSF54211 241 500 3.19E-97 T 01-11-2018 IPR020568 Ribosomal protein S5 domain 2-type fold CDA09_04495 275d22a89851e74a7b3aeed44094c604 240 SUPERFAMILY SSF55315 1 72 3.06E-18 T 01-11-2018 IPR029064 50S ribosomal protein L30e-like CDA09_04495 275d22a89851e74a7b3aeed44094c604 240 Pfam PF08032 RNA 2'-O ribose methyltransferase substrate binding 1 74 1.2E-16 T 01-11-2018 IPR013123 RNA 2-O ribose methyltransferase, substrate binding GO:0008168 Reactome: R-HSA-6793080 CDA09_04495 275d22a89851e74a7b3aeed44094c604 240 SUPERFAMILY SSF75217 79 239 7.19E-49 T 01-11-2018 IPR029028 Alpha/beta knot methyltransferases CDA09_04495 275d22a89851e74a7b3aeed44094c604 240 Gene3D G3DSA:3.30.1330.30 1 72 6.0E-19 T 01-11-2018 IPR029064 50S ribosomal protein L30e-like CDA09_04495 275d22a89851e74a7b3aeed44094c604 240 SMART SM00967 1 77 6.2E-17 T 01-11-2018 IPR013123 RNA 2-O ribose methyltransferase, substrate binding GO:0008168 Reactome: R-HSA-6793080 CDA09_04495 275d22a89851e74a7b3aeed44094c604 240 Pfam PF00588 SpoU rRNA Methylase family 92 232 5.7E-40 T 01-11-2018 IPR001537 tRNA/rRNA methyltransferase, SpoU type GO:0003723|GO:0006396|GO:0008173 CDA09_04495 275d22a89851e74a7b3aeed44094c604 240 Gene3D G3DSA:3.40.1280.10 74 239 3.3E-59 T 01-11-2018 IPR029026 tRNA (guanine-N1-)-methyltransferase, N-terminal CDA09_04495 275d22a89851e74a7b3aeed44094c604 240 TIGRFAM TIGR00186 rRNA_methyl_3: RNA methyltransferase, TrmH family, group 3 2 238 2.4E-72 T 01-11-2018 IPR004441 RNA methyltransferase TrmH family GO:0006396|GO:0008173 Reactome: R-HSA-6793080 CDA09_04495 275d22a89851e74a7b3aeed44094c604 240 Hamap MF_01887 23S rRNA (guanosine-2'-O-)-methyltransferase RlmB [rlmB]. 1 239 42.395 T 01-11-2018 IPR024915 23S rRNA (guanosine-2-O-)-methyltransferase RlmB CDA09_04805 cc7034c4d17973aec15d23bae5fbdbcc 554 SUPERFAMILY SSF52029 184 376 1.2E-83 T 01-11-2018 IPR027409 GroEL-like apical domain superfamily CDA09_04805 cc7034c4d17973aec15d23bae5fbdbcc 554 SUPERFAMILY SSF54849 137 202 3.2E-25 T 01-11-2018 IPR027410 TCP-1-like chaperonin intermediate domain superfamily CDA09_04805 cc7034c4d17973aec15d23bae5fbdbcc 554 Gene3D G3DSA:1.10.560.10 8 521 5.7E-241 T 01-11-2018 IPR027413 GroEL-like equatorial domain superfamily CDA09_04805 cc7034c4d17973aec15d23bae5fbdbcc 554 PRINTS PR00298 60kDa chaperonin signature 398 419 1.6E-74 T 01-11-2018 IPR001844 Chaperonin Cpn60 GO:0005737|GO:0042026 Reactome: R-HSA-1268020|Reactome: R-HSA-8869496 CDA09_04805 cc7034c4d17973aec15d23bae5fbdbcc 554 PRINTS PR00298 60kDa chaperonin signature 268 291 1.6E-74 T 01-11-2018 IPR001844 Chaperonin Cpn60 GO:0005737|GO:0042026 Reactome: R-HSA-1268020|Reactome: R-HSA-8869496 CDA09_04805 cc7034c4d17973aec15d23bae5fbdbcc 554 PRINTS PR00298 60kDa chaperonin signature 83 110 1.6E-74 T 01-11-2018 IPR001844 Chaperonin Cpn60 GO:0005737|GO:0042026 Reactome: R-HSA-1268020|Reactome: R-HSA-8869496 CDA09_04805 cc7034c4d17973aec15d23bae5fbdbcc 554 PRINTS PR00298 60kDa chaperonin signature 350 375 1.6E-74 T 01-11-2018 IPR001844 Chaperonin Cpn60 GO:0005737|GO:0042026 Reactome: R-HSA-1268020|Reactome: R-HSA-8869496 CDA09_04805 cc7034c4d17973aec15d23bae5fbdbcc 554 PRINTS PR00298 60kDa chaperonin signature 27 53 1.6E-74 T 01-11-2018 IPR001844 Chaperonin Cpn60 GO:0005737|GO:0042026 Reactome: R-HSA-1268020|Reactome: R-HSA-8869496 CDA09_04805 cc7034c4d17973aec15d23bae5fbdbcc 554 ProSitePatterns PS00296 Chaperonins cpn60 signature. 405 416 - T 01-11-2018 IPR018370 Chaperonin Cpn60, conserved site GO:0005524|GO:0005737|GO:0006457 Reactome: R-HSA-1268020|Reactome: R-HSA-8869496 CDA09_04805 cc7034c4d17973aec15d23bae5fbdbcc 554 TIGRFAM TIGR02348 GroEL: chaperonin GroL 3 526 1.4E-257 T 01-11-2018 IPR001844 Chaperonin Cpn60 GO:0005737|GO:0042026 Reactome: R-HSA-1268020|Reactome: R-HSA-8869496 CDA09_04805 cc7034c4d17973aec15d23bae5fbdbcc 554 Pfam PF00118 TCP-1/cpn60 chaperonin family 23 521 2.6E-100 T 01-11-2018 IPR002423 Chaperonin Cpn60/TCP-1 family GO:0005524 CDA09_04805 cc7034c4d17973aec15d23bae5fbdbcc 554 Hamap MF_00600 60 kDa chaperonin [groL]. 2 544 41.615 T 01-11-2018 IPR001844 Chaperonin Cpn60 GO:0005737|GO:0042026 Reactome: R-HSA-1268020|Reactome: R-HSA-8869496 CDA09_04805 cc7034c4d17973aec15d23bae5fbdbcc 554 Gene3D G3DSA:3.30.260.10 136 410 5.7E-241 T 01-11-2018 IPR027410 TCP-1-like chaperonin intermediate domain superfamily CDA09_04805 cc7034c4d17973aec15d23bae5fbdbcc 554 SUPERFAMILY SSF48592 7 521 7.25E-78 T 01-11-2018 IPR027413 GroEL-like equatorial domain superfamily CDA09_04805 cc7034c4d17973aec15d23bae5fbdbcc 554 Gene3D G3DSA:3.50.7.10 192 372 5.7E-241 T 01-11-2018 IPR027409 GroEL-like apical domain superfamily CDA09_09535 2bba100d4f70efd6cd2a72bf32b058c6 927 SMART SM00487 164 381 2.2E-13 T 01-11-2018 IPR014001 Helicase superfamily 1/2, ATP-binding domain CDA09_09535 2bba100d4f70efd6cd2a72bf32b058c6 927 SUPERFAMILY SSF52540 189 559 6.45E-13 T 01-11-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CDA09_09535 2bba100d4f70efd6cd2a72bf32b058c6 927 Pfam PF08463 EcoEI R protein C-terminal 751 925 3.8E-43 T 01-11-2018 IPR013670 EcoEI R protein C-terminal domain GO:0003677|GO:0003824|GO:0006304 CDA09_09535 2bba100d4f70efd6cd2a72bf32b058c6 927 Pfam PF04851 Type III restriction enzyme, res subunit 166 353 7.2E-38 T 01-11-2018 IPR006935 Helicase/UvrB, N-terminal GO:0003677|GO:0005524|GO:0016787 CDA09_09535 2bba100d4f70efd6cd2a72bf32b058c6 927 SUPERFAMILY SSF52540 167 385 8.1E-29 T 01-11-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CDA09_09535 2bba100d4f70efd6cd2a72bf32b058c6 927 Gene3D G3DSA:3.40.50.300 151 366 6.2E-43 T 01-11-2018 CDA09_09535 2bba100d4f70efd6cd2a72bf32b058c6 927 Gene3D G3DSA:3.40.50.300 368 600 2.6E-51 T 01-11-2018 CDA09_06580 e314bb72edbc4c216d2825fa7da1bd7b 345 Gene3D G3DSA:3.40.50.1170 18 232 3.6E-82 T 01-11-2018 IPR037152 L-asparaginase, N-terminal domain superfamily Reactome: R-HSA-70614 CDA09_06580 e314bb72edbc4c216d2825fa7da1bd7b 345 PIRSF PIRSF001220 16 345 4.2E-81 T 01-11-2018 IPR006034 Asparaginase/glutaminase-like Reactome: R-HSA-70614 CDA09_06580 e314bb72edbc4c216d2825fa7da1bd7b 345 SMART SM00870 20 339 1.0E-124 T 01-11-2018 IPR006034 Asparaginase/glutaminase-like Reactome: R-HSA-70614 CDA09_06580 e314bb72edbc4c216d2825fa7da1bd7b 345 Gene3D G3DSA:3.40.50.40 233 345 5.2E-30 T 01-11-2018 IPR027473 L-asparaginase, C-terminal Reactome: R-HSA-70614 CDA09_06580 e314bb72edbc4c216d2825fa7da1bd7b 345 Pfam PF00710 Asparaginase, N-terminal 20 210 3.2E-52 T 01-11-2018 IPR027474 L-asparaginase, N-terminal Reactome: R-HSA-70614 CDA09_06580 e314bb72edbc4c216d2825fa7da1bd7b 345 TIGRFAM TIGR00520 asnASE_II: L-asparaginase, type II 8 345 2.3E-111 T 01-11-2018 IPR004550 L-asparaginase, type II GO:0004067|GO:0006528 CDA09_06580 e314bb72edbc4c216d2825fa7da1bd7b 345 ProSitePatterns PS00917 Asparaginase / glutaminase active site signature 2. 102 112 - T 01-11-2018 IPR027475 Asparaginase/glutaminase, active site 2 Reactome: R-HSA-70614 CDA09_06580 e314bb72edbc4c216d2825fa7da1bd7b 345 ProSitePatterns PS00144 Asparaginase / glutaminase active site signature 1. 23 31 - T 01-11-2018 IPR020827 Asparaginase/glutaminase, active site 1 GO:0006520 CDA09_06580 e314bb72edbc4c216d2825fa7da1bd7b 345 SUPERFAMILY SSF53774 19 344 7.33E-92 T 01-11-2018 IPR036152 Asparaginase/glutaminase-like superfamily Reactome: R-HSA-70614 CDA09_06580 e314bb72edbc4c216d2825fa7da1bd7b 345 PRINTS PR00139 Asparaginase/glutaminase family signature 101 119 8.1E-20 T 01-11-2018 IPR006034 Asparaginase/glutaminase-like Reactome: R-HSA-70614 CDA09_06580 e314bb72edbc4c216d2825fa7da1bd7b 345 PRINTS PR00139 Asparaginase/glutaminase family signature 21 32 8.1E-20 T 01-11-2018 IPR006034 Asparaginase/glutaminase-like Reactome: R-HSA-70614 CDA09_06580 e314bb72edbc4c216d2825fa7da1bd7b 345 PRINTS PR00139 Asparaginase/glutaminase family signature 278 296 8.1E-20 T 01-11-2018 IPR006034 Asparaginase/glutaminase-like Reactome: R-HSA-70614 CDA09_06580 e314bb72edbc4c216d2825fa7da1bd7b 345 PIRSF PIRSF500176 17 345 6.4E-74 T 01-11-2018 CDA09_05955 500a2ed2d78eace5f5c914e441d44a56 63 Pfam PF03966 Trm112p-like protein 2 41 1.8E-11 T 01-11-2018 IPR005651 Trm112-like CDA09_05955 500a2ed2d78eace5f5c914e441d44a56 63 Gene3D G3DSA:2.20.25.10 8 63 1.0E-26 T 01-11-2018 CDA09_05955 500a2ed2d78eace5f5c914e441d44a56 63 SUPERFAMILY SSF158997 1 55 6.15E-21 T 01-11-2018 CDA09_05955 500a2ed2d78eace5f5c914e441d44a56 63 Hamap MF_01187 UPF0434 protein YcaR [ycaR]. 1 54 27.381 T 01-11-2018 IPR038053 Uncharacterised protein family UPF0434 CDA09_22275 6153259b3f633123afb96123b815414e 366 SMART SM00382 33 220 9.4E-16 T 01-11-2018 IPR003593 AAA+ ATPase domain CDA09_22275 6153259b3f633123afb96123b815414e 366 TIGRFAM TIGR02142 modC_ABC: molybdate ABC transporter, ATP-binding protein 13 364 7.7E-139 T 01-11-2018 IPR011868 Molybdate ABC transporter, ATP-binding protein GO:0005524|GO:0015098|GO:0015689|GO:0016020 CDA09_22275 6153259b3f633123afb96123b815414e 366 SUPERFAMILY SSF50331 248 364 4.37E-17 T 01-11-2018 IPR008995 Molybdate/tungstate binding, C-terminal CDA09_22275 6153259b3f633123afb96123b815414e 366 Pfam PF00005 ABC transporter 29 170 1.9E-26 T 01-11-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 CDA09_22275 6153259b3f633123afb96123b815414e 366 SUPERFAMILY SSF52540 23 234 3.17E-62 T 01-11-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CDA09_22275 6153259b3f633123afb96123b815414e 366 Pfam PF03459 TOBE domain 303 364 3.3E-12 T 01-11-2018 IPR005116 Transport-associated OB, type 1 CDA09_22275 6153259b3f633123afb96123b815414e 366 Gene3D G3DSA:2.40.50.100 302 365 9.7E-12 T 01-11-2018 CDA09_22275 6153259b3f633123afb96123b815414e 366 Gene3D G3DSA:3.40.50.300 25 240 7.4E-58 T 01-11-2018 CDA09_22275 6153259b3f633123afb96123b815414e 366 ProSitePatterns PS00211 ABC transporters family signature. 143 157 - T 01-11-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 CDA09_05900 404f9b3d409cf3edd6859f1db76643e4 212 Gene3D G3DSA:3.40.30.10 71 211 9.0E-16 T 01-11-2018 CDA09_05900 404f9b3d409cf3edd6859f1db76643e4 212 Pfam PF13098 Thioredoxin-like domain 89 184 4.1E-9 T 01-11-2018 IPR012336 Thioredoxin-like fold CDA09_05900 404f9b3d409cf3edd6859f1db76643e4 212 SUPERFAMILY SSF52833 75 196 2.95E-11 T 01-11-2018 IPR036249 Thioredoxin-like superfamily CDA09_13820 5aba311aa083255d2b7b8fd0f8bfb777 374 Pfam PF02770 Acyl-CoA dehydrogenase, middle domain 122 214 4.5E-24 T 01-11-2018 IPR006091 Acyl-CoA oxidase/dehydrogenase, central domain GO:0016627|GO:0055114 CDA09_13820 5aba311aa083255d2b7b8fd0f8bfb777 374 Gene3D G3DSA:1.20.140.10 230 374 5.3E-39 T 01-11-2018 CDA09_13820 5aba311aa083255d2b7b8fd0f8bfb777 374 Pfam PF02771 Acyl-CoA dehydrogenase, N-terminal domain 7 117 5.0E-38 T 01-11-2018 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal GO:0016627|GO:0050660|GO:0055114 CDA09_13820 5aba311aa083255d2b7b8fd0f8bfb777 374 SUPERFAMILY SSF47203 224 374 1.5E-42 T 01-11-2018 IPR036250 Acyl-CoA dehydrogenase-like, C-terminal GO:0016627|GO:0055114 CDA09_13820 5aba311aa083255d2b7b8fd0f8bfb777 374 Pfam PF00441 Acyl-CoA dehydrogenase, C-terminal domain 226 374 1.7E-40 T 01-11-2018 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal GO:0016627|GO:0055114 CDA09_13820 5aba311aa083255d2b7b8fd0f8bfb777 374 ProSitePatterns PS00073 Acyl-CoA dehydrogenases signature 2. 333 352 - T 01-11-2018 IPR006089 Acyl-CoA dehydrogenase, conserved site GO:0003995|GO:0055114 CDA09_13820 5aba311aa083255d2b7b8fd0f8bfb777 374 Gene3D G3DSA:2.40.110.10 120 229 9.3E-39 T 01-11-2018 CDA09_13820 5aba311aa083255d2b7b8fd0f8bfb777 374 Gene3D G3DSA:1.10.540.10 1 119 1.2E-40 T 01-11-2018 IPR037069 Acyl-CoA dehydrogenase/oxidase, N-terminal domain superfamily GO:0016627|GO:0050660|GO:0055114 CDA09_13820 5aba311aa083255d2b7b8fd0f8bfb777 374 SUPERFAMILY SSF56645 3 237 2.88E-85 T 01-11-2018 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain superfamily GO:0016627|GO:0055114 CDA09_13695 d78f44ed3c3322deda60935ca6bf39e4 252 SUPERFAMILY SSF51735 1 251 1.14E-65 T 01-11-2018 IPR036291 NAD(P)-binding domain superfamily CDA09_13695 d78f44ed3c3322deda60935ca6bf39e4 252 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 17 249 7.3E-49 T 01-11-2018 CDA09_13695 d78f44ed3c3322deda60935ca6bf39e4 252 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 83 94 6.3E-10 T 01-11-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CDA09_13695 d78f44ed3c3322deda60935ca6bf39e4 252 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 157 176 6.3E-10 T 01-11-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CDA09_13695 d78f44ed3c3322deda60935ca6bf39e4 252 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 135 143 6.3E-10 T 01-11-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CDA09_13695 d78f44ed3c3322deda60935ca6bf39e4 252 Gene3D G3DSA:3.40.50.720 1 250 1.3E-64 T 01-11-2018 CDA09_13695 d78f44ed3c3322deda60935ca6bf39e4 252 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 157 176 1.4E-29 T 01-11-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CDA09_13695 d78f44ed3c3322deda60935ca6bf39e4 252 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 8 25 1.4E-29 T 01-11-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CDA09_13695 d78f44ed3c3322deda60935ca6bf39e4 252 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 213 233 1.4E-29 T 01-11-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CDA09_13695 d78f44ed3c3322deda60935ca6bf39e4 252 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 83 94 1.4E-29 T 01-11-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CDA09_13695 d78f44ed3c3322deda60935ca6bf39e4 252 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 178 195 1.4E-29 T 01-11-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CDA09_13695 d78f44ed3c3322deda60935ca6bf39e4 252 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 129 145 1.4E-29 T 01-11-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CDA09_17995 abd21616dc25510548c1ca3e07b97589 255 SUPERFAMILY SSF56281 1 244 4.19E-43 T 01-11-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like CDA09_17995 abd21616dc25510548c1ca3e07b97589 255 SMART SM00849 18 204 8.3E-9 T 01-11-2018 IPR001279 Metallo-beta-lactamase CDA09_17995 abd21616dc25510548c1ca3e07b97589 255 Pfam PF12706 Beta-lactamase superfamily domain 28 220 1.9E-20 T 01-11-2018 IPR001279 Metallo-beta-lactamase CDA09_17995 abd21616dc25510548c1ca3e07b97589 255 Gene3D G3DSA:3.60.15.10 2 251 7.5E-37 T 01-11-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like CDA09_17995 abd21616dc25510548c1ca3e07b97589 255 PRINTS PR00388 3'5'-cyclic nucleotide class II phosphodiesterase signature 82 103 5.5E-6 T 01-11-2018 IPR000396 Cyclic-AMP phosphodiesterase, class-II GO:0004115|GO:0006198 CDA09_17995 abd21616dc25510548c1ca3e07b97589 255 PRINTS PR00388 3'5'-cyclic nucleotide class II phosphodiesterase signature 50 68 5.5E-6 T 01-11-2018 IPR000396 Cyclic-AMP phosphodiesterase, class-II GO:0004115|GO:0006198 CDA09_05350 337786680810307130265aec34e6dd3c 314 Gene3D G3DSA:3.90.420.10 60 314 1.0E-103 T 01-11-2018 IPR036374 Oxidoreductase, molybdopterin-binding domain superfamily GO:0042128 Reactome: R-HSA-1614517 CDA09_05350 337786680810307130265aec34e6dd3c 314 SUPERFAMILY SSF56524 67 310 1.57E-89 T 01-11-2018 IPR036374 Oxidoreductase, molybdopterin-binding domain superfamily GO:0042128 Reactome: R-HSA-1614517 CDA09_05350 337786680810307130265aec34e6dd3c 314 Pfam PF00174 Oxidoreductase molybdopterin binding domain 102 252 1.2E-28 T 01-11-2018 IPR000572 Oxidoreductase, molybdopterin-binding domain GO:0042128 Reactome: R-HSA-1614517 CDA09_05350 337786680810307130265aec34e6dd3c 314 Hamap MF_01206 Protein-methionine-sulfoxide reductase catalytic subunit MsrP [msrP]. 7 314 55.367 T 01-11-2018 IPR022867 Protein-methionine-sulfoxide reductase subunit MsrP GO:0016667|GO:0030091|GO:0043546|GO:0055114 CDA09_19460 8600eb30bceed6407bb4d5ac2192559e 101 ProSitePatterns PS00527 Ribosomal protein S14 signature. 63 85 - T 01-11-2018 IPR018271 Ribosomal protein S14, conserved site GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 CDA09_19460 8600eb30bceed6407bb4d5ac2192559e 101 SUPERFAMILY SSF57716 2 101 4.56E-37 T 01-11-2018 CDA09_19460 8600eb30bceed6407bb4d5ac2192559e 101 Gene3D G3DSA:4.10.830.10 40 101 1.1E-23 T 01-11-2018 CDA09_19460 8600eb30bceed6407bb4d5ac2192559e 101 Hamap MF_00537 30S ribosomal protein S14 [rpsN]. 1 101 26.439 T 01-11-2018 IPR023036 Ribosomal protein S14, bacterial/plastid CDA09_19460 8600eb30bceed6407bb4d5ac2192559e 101 Pfam PF00253 Ribosomal protein S14p/S29e 47 100 9.2E-27 T 01-11-2018 IPR001209 Ribosomal protein S14 GO:0003735|GO:0005622|GO:0005840|GO:0006412 CDA09_13980 0d82ecce401bd3d815b4580e2ad01cd2 716 SUPERFAMILY SSF109604 119 180 5.02E-5 T 01-11-2018 CDA09_13980 0d82ecce401bd3d815b4580e2ad01cd2 716 TIGRFAM TIGR03760 ICE_TraI_Pfluor: integrating conjugative element relaxase, PFGI-1 class 62 288 2.8E-69 T 01-11-2018 IPR022391 Integrating conjugative element relaxase, PFGI-1 class CDA09_13980 0d82ecce401bd3d815b4580e2ad01cd2 716 Gene3D G3DSA:1.10.3210.40 64 296 4.4E-35 T 01-11-2018 CDA09_13980 0d82ecce401bd3d815b4580e2ad01cd2 716 Gene3D G3DSA:2.40.10.200 569 626 7.9E-9 T 01-11-2018 CDA09_13980 0d82ecce401bd3d815b4580e2ad01cd2 716 Pfam PF07514 Putative helicase 62 390 9.2E-86 T 01-11-2018 IPR011119 Uncharacterised domain, helicase/relaxase, putative CDA09_13980 0d82ecce401bd3d815b4580e2ad01cd2 716 SUPERFAMILY SSF46785 573 703 3.81E-21 T 01-11-2018 IPR036390 Winged helix DNA-binding domain superfamily CDA09_13980 0d82ecce401bd3d815b4580e2ad01cd2 716 Pfam PF07515 Putative conjugal transfer nickase/helicase TraI C-term 575 700 3.0E-22 T 01-11-2018 IPR011093 Putative conjugal transfer nickase/helicase TraI, C-terminal CDA09_13980 0d82ecce401bd3d815b4580e2ad01cd2 716 SMART SM00471 124 294 1.5E-4 T 01-11-2018 IPR003607 HD/PDEase domain CDA09_01290 b7770fc080dfce932bddcd5599a37544 208 SUPERFAMILY SSF52540 12 197 1.19E-40 T 01-11-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CDA09_01290 b7770fc080dfce932bddcd5599a37544 208 SMART SM00382 26 205 3.1E-7 T 01-11-2018 IPR003593 AAA+ ATPase domain CDA09_01290 b7770fc080dfce932bddcd5599a37544 208 ProSitePatterns PS00211 ABC transporters family signature. 131 145 - T 01-11-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 CDA09_01290 b7770fc080dfce932bddcd5599a37544 208 TIGRFAM TIGR01189 ccmA: heme ABC exporter, ATP-binding protein CcmA 2 196 5.7E-65 T 01-11-2018 IPR005895 ABC transporter, haem export, CcmA GO:0005215|GO:0017004 CDA09_01290 b7770fc080dfce932bddcd5599a37544 208 Gene3D G3DSA:3.40.50.300 1 206 4.0E-44 T 01-11-2018 CDA09_01290 b7770fc080dfce932bddcd5599a37544 208 Pfam PF00005 ABC transporter 18 159 5.2E-24 T 01-11-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 CDA09_08015 5e3aaabc6cd41aec47d0198bde0318b6 615 Pfam PF01314 Aldehyde ferredoxin oxidoreductase, domains 2 & 3 220 615 5.8E-131 T 01-11-2018 IPR001203 Aldehyde ferredoxin oxidoreductase, C-terminal GO:0009055|GO:0016491|GO:0016625|GO:0051536|GO:0055114 CDA09_08015 5e3aaabc6cd41aec47d0198bde0318b6 615 Gene3D G3DSA:1.10.599.10 240 615 6.9E-129 T 01-11-2018 IPR013985 Aldehyde ferredoxin oxidoreductase, domain 3 GO:0016625|GO:0051536|GO:0055114 KEGG: 00030+1.2.7.5 CDA09_08015 5e3aaabc6cd41aec47d0198bde0318b6 615 Gene3D G3DSA:3.60.9.10 1 209 1.5E-85 T 01-11-2018 IPR036503 Aldehyde ferredoxin oxidoreductase, N-terminal domain superfamily CDA09_08015 5e3aaabc6cd41aec47d0198bde0318b6 615 SUPERFAMILY SSF48310 212 615 4.58E-131 T 01-11-2018 IPR036021 Aldehyde ferredoxin oxidoreductase-like, C-terminal GO:0009055|GO:0016491|GO:0016625|GO:0051536|GO:0055114 CDA09_08015 5e3aaabc6cd41aec47d0198bde0318b6 615 Pfam PF02730 Aldehyde ferredoxin oxidoreductase, N-terminal domain 6 205 2.2E-78 T 01-11-2018 IPR013983 Aldehyde ferredoxin oxidoreductase, N-terminal GO:0016491|GO:0016625|GO:0051536|GO:0055114 CDA09_08015 5e3aaabc6cd41aec47d0198bde0318b6 615 SUPERFAMILY SSF56228 2 208 2.35E-73 T 01-11-2018 IPR036503 Aldehyde ferredoxin oxidoreductase, N-terminal domain superfamily CDA09_08015 5e3aaabc6cd41aec47d0198bde0318b6 615 SMART SM00790 3 206 3.9E-119 T 01-11-2018 IPR013983 Aldehyde ferredoxin oxidoreductase, N-terminal GO:0016491|GO:0016625|GO:0051536|GO:0055114 CDA09_08015 5e3aaabc6cd41aec47d0198bde0318b6 615 Gene3D G3DSA:1.10.569.10 242 443 6.9E-129 T 01-11-2018 IPR013984 Aldehyde ferredoxin oxidoreductase, domain 2 CDA09_11160 00bc1756ef05c27590945e95b034acf0 257 Gene3D G3DSA:3.40.50.720 1 254 2.5E-83 T 01-11-2018 CDA09_11160 00bc1756ef05c27590945e95b034acf0 257 SMART SM00822 This enzymatic domain is part of bacterial polyketide synthases and catalyses the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain. It uses NADPH to reduce the keto group to a hydroxy group. 8 187 4.2E-5 T 01-11-2018 CDA09_11160 00bc1756ef05c27590945e95b034acf0 257 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 15 250 2.9E-61 T 01-11-2018 CDA09_11160 00bc1756ef05c27590945e95b034acf0 257 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 83 94 6.0E-11 T 01-11-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CDA09_11160 00bc1756ef05c27590945e95b034acf0 257 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 136 144 6.0E-11 T 01-11-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CDA09_11160 00bc1756ef05c27590945e95b034acf0 257 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 156 175 6.0E-11 T 01-11-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CDA09_11160 00bc1756ef05c27590945e95b034acf0 257 SUPERFAMILY SSF51735 6 251 3.6E-81 T 01-11-2018 IPR036291 NAD(P)-binding domain superfamily CDA09_11160 00bc1756ef05c27590945e95b034acf0 257 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 143 171 - T 01-11-2018 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 CDA09_11160 00bc1756ef05c27590945e95b034acf0 257 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 177 194 1.2E-42 T 01-11-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CDA09_11160 00bc1756ef05c27590945e95b034acf0 257 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 130 146 1.2E-42 T 01-11-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CDA09_11160 00bc1756ef05c27590945e95b034acf0 257 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 156 175 1.2E-42 T 01-11-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CDA09_11160 00bc1756ef05c27590945e95b034acf0 257 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 217 237 1.2E-42 T 01-11-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CDA09_11160 00bc1756ef05c27590945e95b034acf0 257 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 83 94 1.2E-42 T 01-11-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CDA09_11160 00bc1756ef05c27590945e95b034acf0 257 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 9 26 1.2E-42 T 01-11-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CDA09_04185 a8c069d7a720607a1333291ea5eb96b4 256 SMART SM00563 71 185 6.9E-35 T 01-11-2018 IPR002123 Phospholipid/glycerol acyltransferase GO:0016746 CDA09_04185 a8c069d7a720607a1333291ea5eb96b4 256 Pfam PF01553 Acyltransferase 59 182 2.3E-21 T 01-11-2018 IPR002123 Phospholipid/glycerol acyltransferase GO:0016746 CDA09_04185 a8c069d7a720607a1333291ea5eb96b4 256 SUPERFAMILY SSF69593 4 220 4.18E-37 T 01-11-2018 CDA09_13930 e5a7270e262d1d7a8e559c7650172218 212 TIGRFAM TIGR00505 ribA: GTP cyclohydrolase II 20 206 9.6E-79 T 01-11-2018 IPR000926 GTP cyclohydrolase II, RibA GO:0003935|GO:0009231 KEGG: 00740+3.5.4.25|KEGG: 00790+3.5.4.25|MetaCyc: PWY-6168|MetaCyc: PWY-7539|MetaCyc: PWY-7991 CDA09_13930 e5a7270e262d1d7a8e559c7650172218 212 SUPERFAMILY SSF142695 16 186 2.88E-66 T 01-11-2018 IPR036144 RibA-like superfamily KEGG: 00740+3.5.4.25|KEGG: 00790+3.5.4.25|MetaCyc: PWY-6168|MetaCyc: PWY-7539|MetaCyc: PWY-7991 CDA09_13930 e5a7270e262d1d7a8e559c7650172218 212 Gene3D G3DSA:3.40.50.10990 15 187 3.5E-75 T 01-11-2018 IPR036144 RibA-like superfamily KEGG: 00740+3.5.4.25|KEGG: 00790+3.5.4.25|MetaCyc: PWY-6168|MetaCyc: PWY-7539|MetaCyc: PWY-7991 CDA09_13930 e5a7270e262d1d7a8e559c7650172218 212 Pfam PF00925 GTP cyclohydrolase II 20 183 5.7E-70 T 01-11-2018 IPR032677 GTP cyclohydrolase II KEGG: 00740+3.5.4.25|KEGG: 00790+3.5.4.25|MetaCyc: PWY-6168|MetaCyc: PWY-7539|MetaCyc: PWY-7991 CDA09_13930 e5a7270e262d1d7a8e559c7650172218 212 Hamap MF_00179 GTP cyclohydrolase-2 [ribA]. 14 209 44.384 T 01-11-2018 IPR000926 GTP cyclohydrolase II, RibA GO:0003935|GO:0009231 KEGG: 00740+3.5.4.25|KEGG: 00790+3.5.4.25|MetaCyc: PWY-6168|MetaCyc: PWY-7539|MetaCyc: PWY-7991 CDA09_16580 bf3abeaf56458b90aedd9872a69bbe85 246 TIGRFAM TIGR01829 AcAcCoA_reduct: acetoacetyl-CoA reductase 3 245 1.0E-114 T 01-11-2018 IPR011283 Acetoacetyl-CoA reductase GO:0005737|GO:0018454|GO:0042619|GO:0055114 KEGG: 00630+1.1.1.36|KEGG: 00650+1.1.1.36|MetaCyc: PWY-5676|MetaCyc: PWY-5741|MetaCyc: PWY-7216|MetaCyc: PWY-7948 CDA09_16580 bf3abeaf56458b90aedd9872a69bbe85 246 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 207 227 6.2E-49 T 01-11-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CDA09_16580 bf3abeaf56458b90aedd9872a69bbe85 246 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 79 90 6.2E-49 T 01-11-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CDA09_16580 bf3abeaf56458b90aedd9872a69bbe85 246 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 126 142 6.2E-49 T 01-11-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CDA09_16580 bf3abeaf56458b90aedd9872a69bbe85 246 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 173 190 6.2E-49 T 01-11-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CDA09_16580 bf3abeaf56458b90aedd9872a69bbe85 246 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 4 21 6.2E-49 T 01-11-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CDA09_16580 bf3abeaf56458b90aedd9872a69bbe85 246 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 152 171 6.2E-49 T 01-11-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CDA09_16580 bf3abeaf56458b90aedd9872a69bbe85 246 SMART SM00822 This enzymatic domain is part of bacterial polyketide synthases and catalyses the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain. It uses NADPH to reduce the keto group to a hydroxy group. 3 183 5.3E-5 T 01-11-2018 CDA09_16580 bf3abeaf56458b90aedd9872a69bbe85 246 SUPERFAMILY SSF51735 3 245 4.1E-81 T 01-11-2018 IPR036291 NAD(P)-binding domain superfamily CDA09_16580 bf3abeaf56458b90aedd9872a69bbe85 246 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 79 90 5.4E-16 T 01-11-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CDA09_16580 bf3abeaf56458b90aedd9872a69bbe85 246 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 152 171 5.4E-16 T 01-11-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CDA09_16580 bf3abeaf56458b90aedd9872a69bbe85 246 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 132 140 5.4E-16 T 01-11-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CDA09_16580 bf3abeaf56458b90aedd9872a69bbe85 246 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 139 167 - T 01-11-2018 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 CDA09_16580 bf3abeaf56458b90aedd9872a69bbe85 246 Pfam PF00106 short chain dehydrogenase 4 195 1.4E-61 T 01-11-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CDA09_16580 bf3abeaf56458b90aedd9872a69bbe85 246 Gene3D G3DSA:3.40.50.720 2 246 8.7E-83 T 01-11-2018 CDA09_04500 2eb846e18e7042cf0143d845d117680a 191 PIRSF PIRSF036382 1 190 1.1E-57 T 01-11-2018 IPR008327 Signal transduction response regulator, antiterminator CDA09_04500 2eb846e18e7042cf0143d845d117680a 191 SUPERFAMILY SSF52172 1 184 4.13E-45 T 01-11-2018 IPR011006 CheY-like superfamily CDA09_04500 2eb846e18e7042cf0143d845d117680a 191 SMART SM01012 129 184 1.3E-20 T 01-11-2018 IPR005561 ANTAR domain GO:0003723 CDA09_04500 2eb846e18e7042cf0143d845d117680a 191 Gene3D G3DSA:1.10.10.10 131 189 9.4E-20 T 01-11-2018 IPR036388 Winged helix-like DNA-binding domain superfamily CDA09_04500 2eb846e18e7042cf0143d845d117680a 191 Pfam PF00072 Response regulator receiver domain 4 111 2.0E-7 T 01-11-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 CDA09_04500 2eb846e18e7042cf0143d845d117680a 191 Pfam PF03861 ANTAR domain 133 184 3.1E-17 T 01-11-2018 IPR005561 ANTAR domain GO:0003723 CDA09_04500 2eb846e18e7042cf0143d845d117680a 191 Gene3D G3DSA:3.40.50.2300 1 130 2.1E-12 T 01-11-2018 CDA09_10220 c56643c2b55a3b6b6c628516613ad6cf 339 Pfam PF00175 Oxidoreductase NAD-binding domain 212 319 4.3E-13 T 01-11-2018 IPR001433 Oxidoreductase FAD/NAD(P)-binding GO:0016491|GO:0055114 CDA09_10220 c56643c2b55a3b6b6c628516613ad6cf 339 PRINTS PR00410 Phenol hydroxylase reductase family signature 305 313 3.7E-18 T 01-11-2018 IPR001221 Phenol hydroxylase reductase GO:0055114 CDA09_10220 c56643c2b55a3b6b6c628516613ad6cf 339 PRINTS PR00410 Phenol hydroxylase reductase family signature 133 145 3.7E-18 T 01-11-2018 IPR001221 Phenol hydroxylase reductase GO:0055114 CDA09_10220 c56643c2b55a3b6b6c628516613ad6cf 339 PRINTS PR00410 Phenol hydroxylase reductase family signature 150 157 3.7E-18 T 01-11-2018 IPR001221 Phenol hydroxylase reductase GO:0055114 CDA09_10220 c56643c2b55a3b6b6c628516613ad6cf 339 PRINTS PR00410 Phenol hydroxylase reductase family signature 210 229 3.7E-18 T 01-11-2018 IPR001221 Phenol hydroxylase reductase GO:0055114 CDA09_10220 c56643c2b55a3b6b6c628516613ad6cf 339 PRINTS PR00410 Phenol hydroxylase reductase family signature 194 203 3.7E-18 T 01-11-2018 IPR001221 Phenol hydroxylase reductase GO:0055114 CDA09_10220 c56643c2b55a3b6b6c628516613ad6cf 339 SUPERFAMILY SSF63380 99 197 8.51E-24 T 01-11-2018 IPR017938 Riboflavin synthase-like beta-barrel CDA09_10220 c56643c2b55a3b6b6c628516613ad6cf 339 SUPERFAMILY SSF52343 203 338 2.23E-30 T 01-11-2018 IPR039261 Ferredoxin-NADP reductase (FNR), nucleotide-binding domain CDA09_10220 c56643c2b55a3b6b6c628516613ad6cf 339 Gene3D G3DSA:3.10.20.30 5 95 1.6E-20 T 01-11-2018 IPR012675 Beta-grasp domain superfamily CDA09_10220 c56643c2b55a3b6b6c628516613ad6cf 339 Pfam PF00970 Oxidoreductase FAD-binding domain 110 198 1.4E-15 T 01-11-2018 IPR008333 Flavoprotein pyridine nucleotide cytochrome reductase-like, FAD-binding domain Reactome: R-HSA-1237044 CDA09_10220 c56643c2b55a3b6b6c628516613ad6cf 339 Pfam PF00111 2Fe-2S iron-sulfur cluster binding domain 13 83 9.3E-13 T 01-11-2018 IPR001041 2Fe-2S ferredoxin-type iron-sulfur binding domain GO:0009055|GO:0051536 CDA09_10220 c56643c2b55a3b6b6c628516613ad6cf 339 ProSitePatterns PS00197 2Fe-2S ferredoxin-type iron-sulfur binding region signature. 39 47 - T 01-11-2018 IPR006058 2Fe-2S ferredoxin, iron-sulphur binding site GO:0051537 CDA09_10220 c56643c2b55a3b6b6c628516613ad6cf 339 Gene3D G3DSA:3.40.50.80 200 339 2.5E-27 T 01-11-2018 IPR039261 Ferredoxin-NADP reductase (FNR), nucleotide-binding domain CDA09_10220 c56643c2b55a3b6b6c628516613ad6cf 339 SUPERFAMILY SSF54292 6 96 2.75E-21 T 01-11-2018 IPR036010 2Fe-2S ferredoxin-like superfamily GO:0009055|GO:0051536 CDA09_10220 c56643c2b55a3b6b6c628516613ad6cf 339 Gene3D G3DSA:2.40.30.10 100 198 2.8E-23 T 01-11-2018 CDA09_19330 844dbc8d708edfc41a31b8539865eb5f 662 Pfam PF16177 Acetyl-coenzyme A synthetase N-terminus 29 84 2.7E-11 T 01-11-2018 IPR032387 Acetyl-coenzyme A synthetase, N-terminal domain KEGG: 00010+6.2.1.1|KEGG: 00620+6.2.1.1|KEGG: 00630+6.2.1.1|KEGG: 00640+6.2.1.1|KEGG: 00680+6.2.1.1|KEGG: 00720+6.2.1.1|MetaCyc: PWY-5108|MetaCyc: PWY-5132|MetaCyc: PWY-5133|MetaCyc: PWY-6672|MetaCyc: PWY-7118|MetaCyc: PWY-7857 CDA09_19330 844dbc8d708edfc41a31b8539865eb5f 662 Gene3D G3DSA:3.30.300.30 520 648 6.3E-25 T 01-11-2018 CDA09_19330 844dbc8d708edfc41a31b8539865eb5f 662 Gene3D G3DSA:3.40.50.12780 59 518 5.9E-96 T 01-11-2018 CDA09_19330 844dbc8d708edfc41a31b8539865eb5f 662 SUPERFAMILY SSF56801 31 627 3.66E-156 T 01-11-2018 CDA09_19330 844dbc8d708edfc41a31b8539865eb5f 662 Pfam PF00501 AMP-binding enzyme 88 524 2.8E-81 T 01-11-2018 IPR000873 AMP-dependent synthetase/ligase GO:0003824 CDA09_19330 844dbc8d708edfc41a31b8539865eb5f 662 ProSitePatterns PS00455 Putative AMP-binding domain signature. 266 277 - T 01-11-2018 IPR020845 AMP-binding, conserved site CDA09_19330 844dbc8d708edfc41a31b8539865eb5f 662 Pfam PF13193 AMP-binding enzyme C-terminal domain 534 615 1.6E-21 T 01-11-2018 IPR025110 AMP-binding enzyme, C-terminal domain CDA09_22995 63d13edbd695b1769b967fb7e0f09eff 414 Gene3D G3DSA:3.40.50.300 131 269 2.5E-11 T 01-11-2018 CDA09_22995 63d13edbd695b1769b967fb7e0f09eff 414 SMART SM00448 2 114 1.0E-34 T 01-11-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 CDA09_22995 63d13edbd695b1769b967fb7e0f09eff 414 SUPERFAMILY SSF46689 340 405 1.97E-12 T 01-11-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 CDA09_22995 63d13edbd695b1769b967fb7e0f09eff 414 Gene3D G3DSA:3.40.50.2300 1 125 3.0E-36 T 01-11-2018 CDA09_22995 63d13edbd695b1769b967fb7e0f09eff 414 Gene3D G3DSA:1.10.10.60 352 406 3.4E-13 T 01-11-2018 CDA09_22995 63d13edbd695b1769b967fb7e0f09eff 414 Pfam PF02954 Bacterial regulatory protein, Fis family 363 403 6.9E-5 T 01-11-2018 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 CDA09_22995 63d13edbd695b1769b967fb7e0f09eff 414 Pfam PF00072 Response regulator receiver domain 4 114 9.6E-28 T 01-11-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 CDA09_22995 63d13edbd695b1769b967fb7e0f09eff 414 Gene3D G3DSA:1.10.8.60 270 346 1.7E-7 T 01-11-2018 CDA09_22995 63d13edbd695b1769b967fb7e0f09eff 414 SUPERFAMILY SSF52172 1 125 1.11E-38 T 01-11-2018 IPR011006 CheY-like superfamily CDA09_22995 63d13edbd695b1769b967fb7e0f09eff 414 SUPERFAMILY SSF52540 197 341 2.5E-13 T 01-11-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CDA09_22995 63d13edbd695b1769b967fb7e0f09eff 414 Pfam PF14532 Sigma-54 interaction domain 136 269 5.4E-15 T 01-11-2018 IPR002078 RNA polymerase sigma factor 54 interaction domain GO:0005524|GO:0006355|GO:0008134 CDA09_00205 5361539c76092a3c9411b7d61e000481 193 SUPERFAMILY SSF52833 75 183 1.29E-7 T 01-11-2018 IPR036249 Thioredoxin-like superfamily CDA09_00205 5361539c76092a3c9411b7d61e000481 193 ProSitePatterns PS00194 Thioredoxin family active site. 83 101 - T 01-11-2018 IPR017937 Thioredoxin, conserved site GO:0045454 CDA09_00205 5361539c76092a3c9411b7d61e000481 193 Gene3D G3DSA:3.40.30.10 53 187 1.0E-8 T 01-11-2018 CDA09_18570 9251d8f0a23a3fed057d784f1c23b4cd 324 Gene3D G3DSA:3.40.50.970 1 324 9.7E-119 T 01-11-2018 CDA09_18570 9251d8f0a23a3fed057d784f1c23b4cd 324 Pfam PF00676 Dehydrogenase E1 component 17 313 1.8E-91 T 01-11-2018 IPR001017 Dehydrogenase, E1 component GO:0016624 Reactome: R-HSA-389661 CDA09_18570 9251d8f0a23a3fed057d784f1c23b4cd 324 SUPERFAMILY SSF52518 4 323 6.09E-98 T 01-11-2018 IPR029061 Thiamin diphosphate-binding fold CDA09_10010 0d88cc27cc39971fbec5f66e3a7f1557 240 SUPERFAMILY SSF54909 121 225 2.95E-8 T 01-11-2018 IPR011008 Dimeric alpha-beta barrel CDA09_10010 0d88cc27cc39971fbec5f66e3a7f1557 240 Pfam PF07110 EthD domain 129 219 3.3E-8 T 01-11-2018 IPR009799 EthD domain CDA09_14320 ee14ba62d48760bdba83a1efb061a823 400 Gene3D G3DSA:3.40.50.620 3 229 3.8E-75 T 01-11-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold CDA09_14320 ee14ba62d48760bdba83a1efb061a823 400 TIGRFAM TIGR00233 trpS: tryptophan--tRNA ligase 4 173 7.6E-59 T 01-11-2018 IPR002306 Tryptophan-tRNA ligase GO:0000166|GO:0004830|GO:0005524|GO:0005737|GO:0006436 KEGG: 00970+6.1.1.2 CDA09_14320 ee14ba62d48760bdba83a1efb061a823 400 Gene3D G3DSA:1.10.240.10 260 365 7.6E-36 T 01-11-2018 CDA09_14320 ee14ba62d48760bdba83a1efb061a823 400 Pfam PF00579 tRNA synthetases class I (W and Y) 5 170 1.0E-49 T 01-11-2018 IPR002305 Aminoacyl-tRNA synthetase, class Ic GO:0000166|GO:0004812|GO:0005524|GO:0006418 CDA09_14320 ee14ba62d48760bdba83a1efb061a823 400 Pfam PF00579 tRNA synthetases class I (W and Y) 244 328 1.7E-11 T 01-11-2018 IPR002305 Aminoacyl-tRNA synthetase, class Ic GO:0000166|GO:0004812|GO:0005524|GO:0006418 CDA09_14320 ee14ba62d48760bdba83a1efb061a823 400 SUPERFAMILY SSF52374 5 397 8.11E-86 T 01-11-2018 CDA09_14320 ee14ba62d48760bdba83a1efb061a823 400 PRINTS PR01039 Tryptophanyl-tRNA synthetase signature 67 86 2.1E-22 T 01-11-2018 IPR002306 Tryptophan-tRNA ligase GO:0000166|GO:0004830|GO:0005524|GO:0005737|GO:0006436 KEGG: 00970+6.1.1.2 CDA09_14320 ee14ba62d48760bdba83a1efb061a823 400 PRINTS PR01039 Tryptophanyl-tRNA synthetase signature 145 166 2.1E-22 T 01-11-2018 IPR002306 Tryptophan-tRNA ligase GO:0000166|GO:0004830|GO:0005524|GO:0005737|GO:0006436 KEGG: 00970+6.1.1.2 CDA09_14320 ee14ba62d48760bdba83a1efb061a823 400 PRINTS PR01039 Tryptophanyl-tRNA synthetase signature 16 32 2.1E-22 T 01-11-2018 IPR002306 Tryptophan-tRNA ligase GO:0000166|GO:0004830|GO:0005524|GO:0005737|GO:0006436 KEGG: 00970+6.1.1.2 CDA09_14320 ee14ba62d48760bdba83a1efb061a823 400 Hamap MF_00140_B Tryptophan--tRNA ligase [trpS]. 3 398 34.656 T 01-11-2018 IPR024109 Tryptophan-tRNA ligase, bacterial-type GO:0004830 KEGG: 00970+6.1.1.2|Reactome: R-HSA-379726 CDA09_14320 ee14ba62d48760bdba83a1efb061a823 400 ProSitePatterns PS00178 Aminoacyl-transfer RNA synthetases class-I signature. 12 21 - T 01-11-2018 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site GO:0000166|GO:0004812|GO:0005524|GO:0006418 CDA09_11895 fd121b0e0acdb41e4b74accdb9139218 159 SUPERFAMILY SSF54534 3 139 5.5E-33 T 01-11-2018 CDA09_11895 fd121b0e0acdb41e4b74accdb9139218 159 Pfam PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase 4 134 3.0E-7 T 01-11-2018 IPR001179 FKBP-type peptidyl-prolyl cis-trans isomerase domain CDA09_11895 fd121b0e0acdb41e4b74accdb9139218 159 Gene3D G3DSA:2.40.10.330 70 120 7.4E-52 T 01-11-2018 CDA09_11895 fd121b0e0acdb41e4b74accdb9139218 159 Gene3D G3DSA:3.10.50.40 3 153 7.4E-52 T 01-11-2018 CDA09_14165 502aa208d571b27da7eda6857e9df6bc 597 Pfam PF12161 HsdM N-terminal domain 3 140 5.4E-17 T 01-11-2018 IPR022749 N6 adenine-specific DNA methyltransferase, N-terminal domain CDA09_14165 502aa208d571b27da7eda6857e9df6bc 597 ProSitePatterns PS00092 N-6 Adenine-specific DNA methylases signature. 287 293 - T 01-11-2018 IPR002052 DNA methylase, N-6 adenine-specific, conserved site GO:0003676|GO:0008168|GO:0032259 CDA09_14165 502aa208d571b27da7eda6857e9df6bc 597 Gene3D G3DSA:3.40.50.150 151 483 1.2E-70 T 01-11-2018 CDA09_14165 502aa208d571b27da7eda6857e9df6bc 597 Pfam PF02384 N-6 DNA Methylase 153 458 1.6E-61 T 01-11-2018 IPR003356 DNA methylase, adenine-specific GO:0003677|GO:0006306|GO:0008170 CDA09_14165 502aa208d571b27da7eda6857e9df6bc 597 PRINTS PR00507 N12 class N6 adenine-specific DNA methyltransferase signature 199 213 3.4E-19 T 01-11-2018 CDA09_14165 502aa208d571b27da7eda6857e9df6bc 597 PRINTS PR00507 N12 class N6 adenine-specific DNA methyltransferase signature 284 296 3.4E-19 T 01-11-2018 CDA09_14165 502aa208d571b27da7eda6857e9df6bc 597 PRINTS PR00507 N12 class N6 adenine-specific DNA methyltransferase signature 173 189 3.4E-19 T 01-11-2018 CDA09_14165 502aa208d571b27da7eda6857e9df6bc 597 PRINTS PR00507 N12 class N6 adenine-specific DNA methyltransferase signature 314 338 3.4E-19 T 01-11-2018 CDA09_14165 502aa208d571b27da7eda6857e9df6bc 597 SUPERFAMILY SSF53335 3 498 1.26E-98 T 01-11-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase CDA09_14165 502aa208d571b27da7eda6857e9df6bc 597 Gene3D G3DSA:1.20.1260.30 1 147 9.6E-50 T 01-11-2018 IPR038333 N6 adenine-specific DNA methyltransferase, N-terminal domain superfamily CDA09_13710 965ac433f81ed0b4574e03e526e1de1f 528 Pfam PF05977 Transmembrane secretion effector 9 525 2.8E-131 T 01-11-2018 IPR010290 Transmembrane secretion effector CDA09_13710 965ac433f81ed0b4574e03e526e1de1f 528 SUPERFAMILY SSF103473 16 402 2.62E-42 T 01-11-2018 IPR036259 MFS transporter superfamily CDA09_13710 965ac433f81ed0b4574e03e526e1de1f 528 Gene3D G3DSA:1.20.1250.20 14 400 1.8E-35 T 01-11-2018 CDA09_13255 4174e7928a60ea737a683785054d2b92 339 Gene3D G3DSA:3.40.190.10 124 337 2.0E-119 T 01-11-2018 CDA09_13255 4174e7928a60ea737a683785054d2b92 339 SUPERFAMILY SSF53850 24 338 8.78E-78 T 01-11-2018 CDA09_13255 4174e7928a60ea737a683785054d2b92 339 PIRSF PIRSF002825 3 339 1.3E-79 T 01-11-2018 IPR026045 Ferric binding protein CDA09_13255 4174e7928a60ea737a683785054d2b92 339 Gene3D G3DSA:3.40.190.10 28 301 2.0E-119 T 01-11-2018 CDA09_13255 4174e7928a60ea737a683785054d2b92 339 Pfam PF13343 Bacterial extracellular solute-binding protein 73 306 3.8E-27 T 01-11-2018 CDA09_13575 28cfc722fa8cdd88062c5ab8598a6e27 815 Pfam PF03176 MMPL family 605 795 1.5E-11 T 01-11-2018 IPR004869 Membrane transport protein MMPL domain GO:0016020 CDA09_13575 28cfc722fa8cdd88062c5ab8598a6e27 815 Gene3D G3DSA:1.20.1640.10 624 809 8.4E-11 T 01-11-2018 CDA09_13575 28cfc722fa8cdd88062c5ab8598a6e27 815 SUPERFAMILY SSF82866 205 399 1.18E-23 T 01-11-2018 CDA09_13575 28cfc722fa8cdd88062c5ab8598a6e27 815 SUPERFAMILY SSF82866 622 802 4.97E-29 T 01-11-2018 CDA09_04995 d26232ac354edbbaaa894b374b1d4222 429 Gene3D G3DSA:3.30.1490.20 119 192 1.5E-24 T 01-11-2018 IPR013815 ATP-grasp fold, subdomain 1 GO:0005524 CDA09_04995 d26232ac354edbbaaa894b374b1d4222 429 SMART SM01210 332 425 3.6E-52 T 01-11-2018 IPR020560 Phosphoribosylglycinamide synthetase, C-domain GO:0004637|GO:0009113 KEGG: 00230+6.3.4.13|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|Reactome: R-HSA-73817 CDA09_04995 d26232ac354edbbaaa894b374b1d4222 429 Pfam PF01071 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain 101 298 8.1E-73 T 01-11-2018 IPR020561 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain KEGG: 00230+6.3.4.13|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|Reactome: R-HSA-73817 CDA09_04995 d26232ac354edbbaaa894b374b1d4222 429 Hamap MF_00138 Phosphoribosylamine--glycine ligase [purD]. 1 425 43.054 T 01-11-2018 IPR000115 Phosphoribosylglycinamide synthetase GO:0004637|GO:0009113 KEGG: 00230+6.3.4.13|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|Reactome: R-HSA-73817 CDA09_04995 d26232ac354edbbaaa894b374b1d4222 429 Pfam PF02843 Phosphoribosylglycinamide synthetase, C domain 333 423 3.3E-29 T 01-11-2018 IPR020560 Phosphoribosylglycinamide synthetase, C-domain GO:0004637|GO:0009113 KEGG: 00230+6.3.4.13|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|Reactome: R-HSA-73817 CDA09_04995 d26232ac354edbbaaa894b374b1d4222 429 SMART SM01209 101 298 1.8E-129 T 01-11-2018 CDA09_04995 d26232ac354edbbaaa894b374b1d4222 429 TIGRFAM TIGR00877 purD: phosphoribosylamine--glycine ligase 1 425 1.4E-168 T 01-11-2018 IPR000115 Phosphoribosylglycinamide synthetase GO:0004637|GO:0009113 KEGG: 00230+6.3.4.13|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|Reactome: R-HSA-73817 CDA09_04995 d26232ac354edbbaaa894b374b1d4222 429 SUPERFAMILY SSF56059 102 322 3.72E-61 T 01-11-2018 CDA09_04995 d26232ac354edbbaaa894b374b1d4222 429 Pfam PF02844 Phosphoribosylglycinamide synthetase, N domain 1 100 6.1E-37 T 01-11-2018 IPR020562 Phosphoribosylglycinamide synthetase, N-terminal GO:0004637|GO:0009113 KEGG: 00230+6.3.4.13|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|Reactome: R-HSA-73817 CDA09_04995 d26232ac354edbbaaa894b374b1d4222 429 Gene3D G3DSA:3.90.600.10 332 429 2.3E-34 T 01-11-2018 IPR037123 Phosphoribosylglycinamide synthetase, C-domain superfamily GO:0004637|GO:0009113 KEGG: 00230+6.3.4.13|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|Reactome: R-HSA-73817 CDA09_04995 d26232ac354edbbaaa894b374b1d4222 429 Gene3D G3DSA:3.40.50.20 1 93 6.5E-37 T 01-11-2018 CDA09_04995 d26232ac354edbbaaa894b374b1d4222 429 Gene3D G3DSA:3.30.470.20 193 331 4.2E-56 T 01-11-2018 CDA09_04995 d26232ac354edbbaaa894b374b1d4222 429 SUPERFAMILY SSF51246 331 425 5.07E-32 T 01-11-2018 IPR011054 Rudiment single hybrid motif Reactome: R-HSA-196780 CDA09_04995 d26232ac354edbbaaa894b374b1d4222 429 SUPERFAMILY SSF52440 1 101 3.45E-35 T 01-11-2018 IPR016185 Pre-ATP-grasp domain superfamily CDA09_21355 6bc88a7f5eac6ecd99e16bec31e894eb 67 Pfam PF02597 ThiS family 5 67 6.3E-14 T 01-11-2018 IPR003749 Sulfur carrier ThiS/MoaD-like Reactome: R-HSA-947581 CDA09_21355 6bc88a7f5eac6ecd99e16bec31e894eb 67 SUPERFAMILY SSF54285 3 66 1.44E-17 T 01-11-2018 IPR016155 Molybdopterin synthase/thiamin biosynthesis sulphur carrier, beta-grasp CDA09_21355 6bc88a7f5eac6ecd99e16bec31e894eb 67 Gene3D G3DSA:3.10.20.30 2 67 3.5E-20 T 01-11-2018 IPR012675 Beta-grasp domain superfamily CDA09_21355 6bc88a7f5eac6ecd99e16bec31e894eb 67 TIGRFAM TIGR01683 thiS: thiamine biosynthesis protein ThiS 4 67 5.5E-22 T 01-11-2018 IPR010035 ThiS, thiamine-biosynthesis CDA09_13665 b540b28c69377e6df8f68bb5e87dbc39 233 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 78 89 5.9E-30 T 01-11-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CDA09_13665 b540b28c69377e6df8f68bb5e87dbc39 233 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 172 189 5.9E-30 T 01-11-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CDA09_13665 b540b28c69377e6df8f68bb5e87dbc39 233 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 125 141 5.9E-30 T 01-11-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CDA09_13665 b540b28c69377e6df8f68bb5e87dbc39 233 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 151 170 5.9E-30 T 01-11-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CDA09_13665 b540b28c69377e6df8f68bb5e87dbc39 233 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 9 26 5.9E-30 T 01-11-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CDA09_13665 b540b28c69377e6df8f68bb5e87dbc39 233 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 197 217 5.9E-30 T 01-11-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CDA09_13665 b540b28c69377e6df8f68bb5e87dbc39 233 SMART SM00822 This enzymatic domain is part of bacterial polyketide synthases and catalyses the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain. It uses NADPH to reduce the keto group to a hydroxy group. 8 187 7.0E-4 T 01-11-2018 CDA09_13665 b540b28c69377e6df8f68bb5e87dbc39 233 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 151 170 4.2E-9 T 01-11-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CDA09_13665 b540b28c69377e6df8f68bb5e87dbc39 233 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 78 89 4.2E-9 T 01-11-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CDA09_13665 b540b28c69377e6df8f68bb5e87dbc39 233 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 131 139 4.2E-9 T 01-11-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CDA09_13665 b540b28c69377e6df8f68bb5e87dbc39 233 Pfam PF00106 short chain dehydrogenase 10 192 5.0E-44 T 01-11-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CDA09_13665 b540b28c69377e6df8f68bb5e87dbc39 233 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 138 166 - T 01-11-2018 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 CDA09_13665 b540b28c69377e6df8f68bb5e87dbc39 233 SUPERFAMILY SSF51735 2 232 7.58E-57 T 01-11-2018 IPR036291 NAD(P)-binding domain superfamily CDA09_13665 b540b28c69377e6df8f68bb5e87dbc39 233 Gene3D G3DSA:3.40.50.720 2 232 1.7E-61 T 01-11-2018 CDA09_05930 fb6884fe614b32a4455853dce9dd3a6a 194 PIRSF PIRSF000349 1 194 8.6E-80 T 01-11-2018 IPR001189 Manganese/iron superoxide dismutase GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-8862803|Reactome: R-HSA-8950505 CDA09_05930 fb6884fe614b32a4455853dce9dd3a6a 194 Pfam PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain 2 83 1.4E-33 T 01-11-2018 IPR019831 Manganese/iron superoxide dismutase, N-terminal GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-8862803|Reactome: R-HSA-8950505 CDA09_05930 fb6884fe614b32a4455853dce9dd3a6a 194 SUPERFAMILY SSF54719 86 193 1.44E-40 T 01-11-2018 IPR036314 Manganese/iron superoxide dismutase, C-terminal domain superfamily MetaCyc: PWY-6854|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-8862803|Reactome: R-HSA-8950505 CDA09_05930 fb6884fe614b32a4455853dce9dd3a6a 194 Pfam PF02777 Iron/manganese superoxide dismutases, C-terminal domain 90 191 2.2E-34 T 01-11-2018 IPR019832 Manganese/iron superoxide dismutase, C-terminal GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-8862803|Reactome: R-HSA-8950505 CDA09_05930 fb6884fe614b32a4455853dce9dd3a6a 194 ProSitePatterns PS00088 Manganese and iron superoxide dismutases signature. 158 165 - T 01-11-2018 IPR019833 Manganese/iron superoxide dismutase, binding site GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-8862803|Reactome: R-HSA-8950505 CDA09_05930 fb6884fe614b32a4455853dce9dd3a6a 194 Gene3D G3DSA:2.40.500.20 84 194 3.5E-38 T 01-11-2018 IPR036314 Manganese/iron superoxide dismutase, C-terminal domain superfamily MetaCyc: PWY-6854|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-8862803|Reactome: R-HSA-8950505 CDA09_05930 fb6884fe614b32a4455853dce9dd3a6a 194 SUPERFAMILY SSF46609 1 88 1.44E-34 T 01-11-2018 IPR036324 Manganese/iron superoxide dismutase, N-terminal domain superfamily MetaCyc: PWY-6854|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-8862803|Reactome: R-HSA-8950505 CDA09_05930 fb6884fe614b32a4455853dce9dd3a6a 194 PRINTS PR01703 Manganese superoxide dismutase signature 6 17 3.2E-22 T 01-11-2018 IPR001189 Manganese/iron superoxide dismutase GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-8862803|Reactome: R-HSA-8950505 CDA09_05930 fb6884fe614b32a4455853dce9dd3a6a 194 PRINTS PR01703 Manganese superoxide dismutase signature 66 79 3.2E-22 T 01-11-2018 IPR001189 Manganese/iron superoxide dismutase GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-8862803|Reactome: R-HSA-8950505 CDA09_05930 fb6884fe614b32a4455853dce9dd3a6a 194 PRINTS PR01703 Manganese superoxide dismutase signature 156 168 3.2E-22 T 01-11-2018 IPR001189 Manganese/iron superoxide dismutase GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-8862803|Reactome: R-HSA-8950505 CDA09_05930 fb6884fe614b32a4455853dce9dd3a6a 194 PRINTS PR01703 Manganese superoxide dismutase signature 27 40 3.2E-22 T 01-11-2018 IPR001189 Manganese/iron superoxide dismutase GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-8862803|Reactome: R-HSA-8950505 CDA09_05930 fb6884fe614b32a4455853dce9dd3a6a 194 PRINTS PR01703 Manganese superoxide dismutase signature 119 127 3.2E-22 T 01-11-2018 IPR001189 Manganese/iron superoxide dismutase GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-8862803|Reactome: R-HSA-8950505 CDA09_05930 fb6884fe614b32a4455853dce9dd3a6a 194 Gene3D G3DSA:1.10.287.990 20 82 3.9E-24 T 01-11-2018 IPR036324 Manganese/iron superoxide dismutase, N-terminal domain superfamily MetaCyc: PWY-6854|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-8862803|Reactome: R-HSA-8950505 CDA09_10940 d7cd4c160c138ace31970245bbf45a53 319 Pfam PF12833 Helix-turn-helix domain 220 293 7.5E-24 T 01-11-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 CDA09_10940 d7cd4c160c138ace31970245bbf45a53 319 SUPERFAMILY SSF52317 2 178 1.87E-41 T 01-11-2018 IPR029062 Class I glutamine amidotransferase-like CDA09_10940 d7cd4c160c138ace31970245bbf45a53 319 SUPERFAMILY SSF46689 197 247 1.08E-9 T 01-11-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 CDA09_10940 d7cd4c160c138ace31970245bbf45a53 319 ProSitePatterns PS00041 Bacterial regulatory proteins, araC family signature. 250 292 - T 01-11-2018 IPR018062 HTH domain AraC-type, conserved site GO:0003700|GO:0006355|GO:0043565 CDA09_10940 d7cd4c160c138ace31970245bbf45a53 319 Pfam PF01965 DJ-1/PfpI family 24 157 1.4E-15 T 01-11-2018 IPR002818 DJ-1/PfpI Reactome: R-HSA-3899300 CDA09_10940 d7cd4c160c138ace31970245bbf45a53 319 SMART SM00342 213 296 1.2E-26 T 01-11-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 CDA09_10940 d7cd4c160c138ace31970245bbf45a53 319 Gene3D G3DSA:1.10.10.60 190 299 1.9E-33 T 01-11-2018 CDA09_10940 d7cd4c160c138ace31970245bbf45a53 319 SUPERFAMILY SSF46689 249 296 3.05E-10 T 01-11-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 CDA09_10940 d7cd4c160c138ace31970245bbf45a53 319 Gene3D G3DSA:3.40.50.880 1 186 2.5E-48 T 01-11-2018 IPR029062 Class I glutamine amidotransferase-like CDA09_03520 abc88972a639da559197dbf54cf2b03c 693 SUPERFAMILY SSF56935 41 668 5.49E-78 T 01-11-2018 CDA09_03520 abc88972a639da559197dbf54cf2b03c 693 Pfam PF00593 TonB dependent receptor 266 641 1.7E-22 T 01-11-2018 IPR000531 TonB-dependent receptor-like, beta-barrel CDA09_03520 abc88972a639da559197dbf54cf2b03c 693 Gene3D G3DSA:2.170.130.10 37 167 1.1E-28 T 01-11-2018 IPR037066 TonB-dependent receptor, plug domain superfamily CDA09_03520 abc88972a639da559197dbf54cf2b03c 693 Gene3D G3DSA:2.40.170.20 171 654 7.0E-35 T 01-11-2018 IPR036942 TonB-dependent receptor-like, beta-barrel domain superfamily CDA09_03520 abc88972a639da559197dbf54cf2b03c 693 Pfam PF07715 TonB-dependent Receptor Plug Domain 52 162 4.3E-21 T 01-11-2018 IPR012910 TonB-dependent receptor, plug domain CDA09_00970 384c51736cece4469fc88ce56eb38f62 1252 Hamap MF_01485 RecBCD enzyme subunit RecB [recB]. 14 1242 21.772 T 01-11-2018 IPR004586 RecBCD enzyme subunit RecB GO:0005524|GO:0006281|GO:0008854 CDA09_00970 384c51736cece4469fc88ce56eb38f62 1252 Pfam PF00580 UvrD/REP helicase N-terminal domain 23 463 2.0E-54 T 01-11-2018 IPR034739 UvrD/AddA helicase, N-terminal GO:0005524 CDA09_00970 384c51736cece4469fc88ce56eb38f62 1252 TIGRFAM TIGR00609 recB: exodeoxyribonuclease V, beta subunit 16 1238 0.0 T 01-11-2018 IPR004586 RecBCD enzyme subunit RecB GO:0005524|GO:0006281|GO:0008854 CDA09_00970 384c51736cece4469fc88ce56eb38f62 1252 Pfam PF13361 UvrD-like helicase C-terminal domain 776 865 1.0E-11 T 01-11-2018 IPR014017 UvrD-like DNA helicase, C-terminal GO:0005524|GO:0016787 CDA09_00970 384c51736cece4469fc88ce56eb38f62 1252 Gene3D G3DSA:3.40.50.300 473 886 8.6E-146 T 01-11-2018 CDA09_00970 384c51736cece4469fc88ce56eb38f62 1252 Gene3D G3DSA:1.10.3170.10 172 373 1.3E-147 T 01-11-2018 CDA09_00970 384c51736cece4469fc88ce56eb38f62 1252 Gene3D G3DSA:3.90.320.10 931 1246 3.8E-85 T 01-11-2018 IPR011604 Exonuclease, phage-type/RecB, C-terminal CDA09_00970 384c51736cece4469fc88ce56eb38f62 1252 Gene3D G3DSA:3.40.50.300 16 463 1.3E-147 T 01-11-2018 CDA09_00970 384c51736cece4469fc88ce56eb38f62 1252 Pfam PF12705 PD-(D/E)XK nuclease superfamily 1108 1216 3.4E-5 T 01-11-2018 IPR038726 PD-(D/E)XK endonuclease-like domain, AddAB-type CDA09_00970 384c51736cece4469fc88ce56eb38f62 1252 SUPERFAMILY SSF52980 942 1241 4.5E-69 T 01-11-2018 IPR011335 Restriction endonuclease type II-like Reactome: R-HSA-6783310 CDA09_00970 384c51736cece4469fc88ce56eb38f62 1252 Gene3D G3DSA:1.10.486.10 625 775 8.6E-146 T 01-11-2018 CDA09_00970 384c51736cece4469fc88ce56eb38f62 1252 SUPERFAMILY SSF52540 22 871 4.41E-105 T 01-11-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CDA09_18620 43b15b6b19ca35d9aec88996045b05e2 548 Pfam PF13360 PQQ-like domain 59 213 5.0E-18 T 01-11-2018 IPR002372 Pyrrolo-quinoline quinone repeat CDA09_18620 43b15b6b19ca35d9aec88996045b05e2 548 SUPERFAMILY SSF50998 25 535 1.96E-139 T 01-11-2018 IPR011047 Quinoprotein alcohol dehydrogenase-like superfamily CDA09_18620 43b15b6b19ca35d9aec88996045b05e2 548 SMART SM00564 170 208 0.8 T 01-11-2018 IPR018391 Pyrrolo-quinoline quinone beta-propeller repeat CDA09_18620 43b15b6b19ca35d9aec88996045b05e2 548 SMART SM00564 236 283 17.0 T 01-11-2018 IPR018391 Pyrrolo-quinoline quinone beta-propeller repeat CDA09_18620 43b15b6b19ca35d9aec88996045b05e2 548 SMART SM00564 123 155 1.6E-5 T 01-11-2018 IPR018391 Pyrrolo-quinoline quinone beta-propeller repeat CDA09_18620 43b15b6b19ca35d9aec88996045b05e2 548 SMART SM00564 392 451 130.0 T 01-11-2018 IPR018391 Pyrrolo-quinoline quinone beta-propeller repeat CDA09_18620 43b15b6b19ca35d9aec88996045b05e2 548 SMART SM00564 460 492 7.6E-8 T 01-11-2018 IPR018391 Pyrrolo-quinoline quinone beta-propeller repeat CDA09_18620 43b15b6b19ca35d9aec88996045b05e2 548 SMART SM00564 73 105 0.6 T 01-11-2018 IPR018391 Pyrrolo-quinoline quinone beta-propeller repeat CDA09_18620 43b15b6b19ca35d9aec88996045b05e2 548 Gene3D G3DSA:2.140.10.10 23 547 5.5E-165 T 01-11-2018 CDA09_18620 43b15b6b19ca35d9aec88996045b05e2 548 Pfam PF01011 PQQ enzyme repeat 466 502 3.5E-9 T 01-11-2018 IPR002372 Pyrrolo-quinoline quinone repeat CDA09_21345 12f50c8352bc05ebf9386fc694147e96 248 Pfam PF02390 Putative methyltransferase 75 242 5.8E-55 T 01-11-2018 CDA09_21345 12f50c8352bc05ebf9386fc694147e96 248 SUPERFAMILY SSF53335 29 247 2.57E-44 T 01-11-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase CDA09_21345 12f50c8352bc05ebf9386fc694147e96 248 Hamap MF_01057 tRNA (guanine-N(7)-)-methyltransferase [trmB]. 35 247 30.427 T 01-11-2018 IPR003358 tRNA (guanine-N-7) methyltransferase, Trmb type GO:0006400|GO:0008176 Reactome: R-HSA-6782315 CDA09_21345 12f50c8352bc05ebf9386fc694147e96 248 TIGRFAM TIGR00091 TIGR00091: tRNA (guanine-N(7)-)-methyltransferase 65 246 1.2E-55 T 01-11-2018 IPR003358 tRNA (guanine-N-7) methyltransferase, Trmb type GO:0006400|GO:0008176 Reactome: R-HSA-6782315 CDA09_21345 12f50c8352bc05ebf9386fc694147e96 248 Gene3D G3DSA:3.40.50.150 41 247 3.4E-69 T 01-11-2018 CDA09_01095 6ea12c7994a2cde632b3134d4e33bd67 67 PIRSF PIRSF002599 1 67 2.3E-23 T 01-11-2018 IPR012156 Cold shock, CspA GO:0003676 CDA09_01095 6ea12c7994a2cde632b3134d4e33bd67 67 SUPERFAMILY SSF50249 1 66 2.36E-25 T 01-11-2018 IPR012340 Nucleic acid-binding, OB-fold CDA09_01095 6ea12c7994a2cde632b3134d4e33bd67 67 SMART SM00357 3 67 1.1E-28 T 01-11-2018 IPR011129 Cold shock domain GO:0003676 CDA09_01095 6ea12c7994a2cde632b3134d4e33bd67 67 Pfam PF00313 'Cold-shock' DNA-binding domain 3 65 4.7E-30 T 01-11-2018 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 CDA09_01095 6ea12c7994a2cde632b3134d4e33bd67 67 Gene3D G3DSA:2.40.50.140 1 65 9.0E-30 T 01-11-2018 CDA09_01095 6ea12c7994a2cde632b3134d4e33bd67 67 ProSitePatterns PS00352 'Cold-shock' domain signature. 15 34 - T 01-11-2018 IPR019844 Cold-shock conserved site CDA09_01095 6ea12c7994a2cde632b3134d4e33bd67 67 PRINTS PR00050 Cold shock protein signature 25 34 2.7E-17 T 01-11-2018 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 CDA09_01095 6ea12c7994a2cde632b3134d4e33bd67 67 PRINTS PR00050 Cold shock protein signature 40 58 2.7E-17 T 01-11-2018 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 CDA09_01095 6ea12c7994a2cde632b3134d4e33bd67 67 PRINTS PR00050 Cold shock protein signature 4 19 2.7E-17 T 01-11-2018 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 CDA09_07040 788c8dacdbc8385875a5f7a3e12e19c7 859 SUPERFAMILY SSF81301 5 162 2.02E-20 T 01-11-2018 CDA09_07040 788c8dacdbc8385875a5f7a3e12e19c7 859 Gene3D G3DSA:3.30.70.260 787 859 5.7E-7 T 01-11-2018 CDA09_07040 788c8dacdbc8385875a5f7a3e12e19c7 859 SUPERFAMILY SSF55021 680 745 1.37E-8 T 01-11-2018 CDA09_07040 788c8dacdbc8385875a5f7a3e12e19c7 859 PIRSF PIRSF006288 3 859 0.0 T 01-11-2018 IPR010043 Bifunctional uridylyltransferase/uridylyl-removing enzyme GO:0006807|GO:0008773 CDA09_07040 788c8dacdbc8385875a5f7a3e12e19c7 859 Pfam PF01909 Nucleotidyltransferase domain 65 96 8.1E-5 T 01-11-2018 IPR002934 Polymerase, nucleotidyl transferase domain GO:0016779 CDA09_07040 788c8dacdbc8385875a5f7a3e12e19c7 859 Hamap MF_00277 Bifunctional uridylyltransferase/uridylyl-removing enzyme [glnD]. 1 859 307.02 T 01-11-2018 IPR010043 Bifunctional uridylyltransferase/uridylyl-removing enzyme GO:0006807|GO:0008773 CDA09_07040 788c8dacdbc8385875a5f7a3e12e19c7 859 Pfam PF01966 HD domain 445 557 9.2E-10 T 01-11-2018 IPR006674 HD domain CDA09_07040 788c8dacdbc8385875a5f7a3e12e19c7 859 Gene3D G3DSA:1.10.3210.10 427 569 1.6E-9 T 01-11-2018 CDA09_07040 788c8dacdbc8385875a5f7a3e12e19c7 859 SMART SM00471 440 587 1.9E-4 T 01-11-2018 IPR003607 HD/PDEase domain CDA09_07040 788c8dacdbc8385875a5f7a3e12e19c7 859 Pfam PF08335 GlnD PII-uridylyltransferase 169 307 5.0E-35 T 01-11-2018 IPR013546 PII-uridylyltransferase/Glutamine-synthetase adenylyltransferase GO:0016779 CDA09_07040 788c8dacdbc8385875a5f7a3e12e19c7 859 SUPERFAMILY SSF55021 787 838 3.5E-9 T 01-11-2018 CDA09_07040 788c8dacdbc8385875a5f7a3e12e19c7 859 SUPERFAMILY SSF81593 189 282 2.75E-8 T 01-11-2018 CDA09_07040 788c8dacdbc8385875a5f7a3e12e19c7 859 SUPERFAMILY SSF109604 411 557 3.77E-14 T 01-11-2018 CDA09_07040 788c8dacdbc8385875a5f7a3e12e19c7 859 TIGRFAM TIGR01693 UTase_glnD: protein-P-II uridylyltransferase 35 837 2.8E-237 T 01-11-2018 IPR010043 Bifunctional uridylyltransferase/uridylyl-removing enzyme GO:0006807|GO:0008773 CDA09_16325 e98b05715b2940b7077b55dc8c680ba2 294 Gene3D G3DSA:2.60.200.30 129 264 8.7E-90 T 01-11-2018 IPR017437 ATP-NAD kinase, PpnK-type, C-terminal GO:0003951|GO:0019674 KEGG: 00760+2.7.1.23|MetaCyc: PWY-5083|MetaCyc: PWY-7268|MetaCyc: PWY-7269|Reactome: R-HSA-196807 CDA09_16325 e98b05715b2940b7077b55dc8c680ba2 294 Gene3D G3DSA:3.40.50.10330 26 287 8.7E-90 T 01-11-2018 IPR017438 Inorganic polyphosphate/ATP-NAD kinase, N-terminal GO:0003951 CDA09_16325 e98b05715b2940b7077b55dc8c680ba2 294 SUPERFAMILY SSF111331 7 289 7.46E-87 T 01-11-2018 IPR016064 NAD kinase/diacylglycerol kinase-like domain superfamily CDA09_16325 e98b05715b2940b7077b55dc8c680ba2 294 Hamap MF_00361 NAD kinase [nadK]. 6 287 33.206 T 01-11-2018 IPR002504 NAD kinase GO:0003951|GO:0006741 KEGG: 00760+2.7.1.23|MetaCyc: PWY-5083|MetaCyc: PWY-7268|MetaCyc: PWY-7269|Reactome: R-HSA-196807 CDA09_16325 e98b05715b2940b7077b55dc8c680ba2 294 Pfam PF01513 ATP-NAD kinase 57 270 4.7E-57 T 01-11-2018 IPR002504 NAD kinase GO:0003951|GO:0006741 KEGG: 00760+2.7.1.23|MetaCyc: PWY-5083|MetaCyc: PWY-7268|MetaCyc: PWY-7269|Reactome: R-HSA-196807 CDA09_15040 597b8bcc25803257912b17acb256ad64 272 Pfam PF09509 Protein of unknown function (Hypoth_ymh) 143 261 9.5E-42 T 01-11-2018 IPR012654 Conserved hypothetical protein CHP02391 CDA09_15040 597b8bcc25803257912b17acb256ad64 272 TIGRFAM TIGR02391 hypoth_ymh: TIGR02391 family protein 143 263 1.5E-36 T 01-11-2018 IPR012654 Conserved hypothetical protein CHP02391 CDA09_21245 4f50186e4eed278bf423b31163e97f2d 295 Gene3D G3DSA:3.30.70.260 3 98 2.3E-22 T 01-11-2018 CDA09_21245 4f50186e4eed278bf423b31163e97f2d 295 SUPERFAMILY SSF53328 99 295 6.93E-63 T 01-11-2018 IPR036477 Formyl transferase, N-terminal domain superfamily GO:0009058|GO:0016742 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 CDA09_21245 4f50186e4eed278bf423b31163e97f2d 295 Hamap MF_01927 Formyltetrahydrofolate deformylase [purU]. 4 294 47.312 T 01-11-2018 IPR004810 Formyltetrahydrofolate deformylase GO:0006189|GO:0008864 KEGG: 00630+3.5.1.10|KEGG: 00670+3.5.1.10|MetaCyc: PWY-2201|MetaCyc: PWY-5497|MetaCyc: PWY-7909 CDA09_21245 4f50186e4eed278bf423b31163e97f2d 295 PIRSF PIRSF036480 4 295 6.4E-111 T 01-11-2018 CDA09_21245 4f50186e4eed278bf423b31163e97f2d 295 SUPERFAMILY SSF55021 6 95 5.0E-14 T 01-11-2018 CDA09_21245 4f50186e4eed278bf423b31163e97f2d 295 PRINTS PR01575 Formyltetrahydrofolate deformylase signature 246 268 3.9E-54 T 01-11-2018 IPR004810 Formyltetrahydrofolate deformylase GO:0006189|GO:0008864 KEGG: 00630+3.5.1.10|KEGG: 00670+3.5.1.10|MetaCyc: PWY-2201|MetaCyc: PWY-5497|MetaCyc: PWY-7909 CDA09_21245 4f50186e4eed278bf423b31163e97f2d 295 PRINTS PR01575 Formyltetrahydrofolate deformylase signature 268 293 3.9E-54 T 01-11-2018 IPR004810 Formyltetrahydrofolate deformylase GO:0006189|GO:0008864 KEGG: 00630+3.5.1.10|KEGG: 00670+3.5.1.10|MetaCyc: PWY-2201|MetaCyc: PWY-5497|MetaCyc: PWY-7909 CDA09_21245 4f50186e4eed278bf423b31163e97f2d 295 PRINTS PR01575 Formyltetrahydrofolate deformylase signature 122 149 3.9E-54 T 01-11-2018 IPR004810 Formyltetrahydrofolate deformylase GO:0006189|GO:0008864 KEGG: 00630+3.5.1.10|KEGG: 00670+3.5.1.10|MetaCyc: PWY-2201|MetaCyc: PWY-5497|MetaCyc: PWY-7909 CDA09_21245 4f50186e4eed278bf423b31163e97f2d 295 PRINTS PR01575 Formyltetrahydrofolate deformylase signature 100 122 3.9E-54 T 01-11-2018 IPR004810 Formyltetrahydrofolate deformylase GO:0006189|GO:0008864 KEGG: 00630+3.5.1.10|KEGG: 00670+3.5.1.10|MetaCyc: PWY-2201|MetaCyc: PWY-5497|MetaCyc: PWY-7909 CDA09_21245 4f50186e4eed278bf423b31163e97f2d 295 PRINTS PR01575 Formyltetrahydrofolate deformylase signature 9 35 3.9E-54 T 01-11-2018 IPR004810 Formyltetrahydrofolate deformylase GO:0006189|GO:0008864 KEGG: 00630+3.5.1.10|KEGG: 00670+3.5.1.10|MetaCyc: PWY-2201|MetaCyc: PWY-5497|MetaCyc: PWY-7909 CDA09_21245 4f50186e4eed278bf423b31163e97f2d 295 Gene3D G3DSA:3.40.50.170 99 295 1.7E-75 T 01-11-2018 CDA09_21245 4f50186e4eed278bf423b31163e97f2d 295 TIGRFAM TIGR00655 PurU: formyltetrahydrofolate deformylase 8 294 2.9E-103 T 01-11-2018 IPR004810 Formyltetrahydrofolate deformylase GO:0006189|GO:0008864 KEGG: 00630+3.5.1.10|KEGG: 00670+3.5.1.10|MetaCyc: PWY-2201|MetaCyc: PWY-5497|MetaCyc: PWY-7909 CDA09_21245 4f50186e4eed278bf423b31163e97f2d 295 Pfam PF00551 Formyl transferase 99 274 5.3E-40 T 01-11-2018 IPR002376 Formyl transferase, N-terminal GO:0009058|GO:0016742 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 CDA09_10725 805f509d01b5fde4f56fd13693c08aab 554 ProSitePatterns PS00076 Pyridine nucleotide-disulphide oxidoreductases class-I active site. 126 136 - T 01-11-2018 IPR012999 Pyridine nucleotide-disulphide oxidoreductase, class I, active site GO:0016668|GO:0055114 CDA09_10725 805f509d01b5fde4f56fd13693c08aab 554 Pfam PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain 430 538 2.1E-28 T 01-11-2018 IPR004099 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain GO:0045454|GO:0055114 CDA09_10725 805f509d01b5fde4f56fd13693c08aab 554 SUPERFAMILY SSF55424 429 552 1.89E-32 T 01-11-2018 IPR016156 FAD/NAD-linked reductase, dimerisation domain superfamily GO:0016491|GO:0050660|GO:0055114 CDA09_10725 805f509d01b5fde4f56fd13693c08aab 554 PIRSF PIRSF000350 2 554 3.9E-252 T 01-11-2018 IPR001100 Pyridine nucleotide-disulphide oxidoreductase, class I GO:0009055|GO:0016491 CDA09_10725 805f509d01b5fde4f56fd13693c08aab 554 Pfam PF00403 Heavy-metal-associated domain 6 65 4.1E-9 T 01-11-2018 IPR006121 Heavy metal-associated domain, HMA GO:0030001|GO:0046872 CDA09_10725 805f509d01b5fde4f56fd13693c08aab 554 ProSitePatterns PS01047 Heavy-metal-associated domain. 9 38 - T 01-11-2018 IPR017969 Heavy-metal-associated, conserved site GO:0030001|GO:0046872 CDA09_10725 805f509d01b5fde4f56fd13693c08aab 554 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 93 411 1.6E-62 T 01-11-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 CDA09_10725 805f509d01b5fde4f56fd13693c08aab 554 Gene3D G3DSA:3.50.50.60 238 354 1.5E-111 T 01-11-2018 IPR036188 FAD/NAD(P)-binding domain superfamily CDA09_10725 805f509d01b5fde4f56fd13693c08aab 554 TIGRFAM TIGR02053 MerA: mercury(II) reductase 93 554 7.8E-179 T 01-11-2018 IPR021179 Mercury(II) reductase GO:0016152|GO:0016491|GO:0045340|GO:0050660|GO:0050661|GO:0050787|GO:0055114 CDA09_10725 805f509d01b5fde4f56fd13693c08aab 554 SUPERFAMILY SSF55008 3 71 1.05E-14 T 01-11-2018 IPR036163 Heavy metal-associated domain superfamily GO:0030001|GO:0046872 CDA09_10725 805f509d01b5fde4f56fd13693c08aab 554 Gene3D G3DSA:3.30.390.30 429 554 4.6E-45 T 01-11-2018 IPR016156 FAD/NAD-linked reductase, dimerisation domain superfamily GO:0016491|GO:0050660|GO:0055114 CDA09_10725 805f509d01b5fde4f56fd13693c08aab 554 SUPERFAMILY SSF51905 93 448 1.89E-49 T 01-11-2018 IPR036188 FAD/NAD(P)-binding domain superfamily CDA09_10725 805f509d01b5fde4f56fd13693c08aab 554 PRINTS PR00945 Mercuric reductase class II signature 138 157 9.0E-80 T 01-11-2018 CDA09_10725 805f509d01b5fde4f56fd13693c08aab 554 PRINTS PR00945 Mercuric reductase class II signature 527 546 9.0E-80 T 01-11-2018 CDA09_10725 805f509d01b5fde4f56fd13693c08aab 554 PRINTS PR00945 Mercuric reductase class II signature 230 247 9.0E-80 T 01-11-2018 CDA09_10725 805f509d01b5fde4f56fd13693c08aab 554 PRINTS PR00945 Mercuric reductase class II signature 103 121 9.0E-80 T 01-11-2018 CDA09_10725 805f509d01b5fde4f56fd13693c08aab 554 PRINTS PR00945 Mercuric reductase class II signature 462 482 9.0E-80 T 01-11-2018 CDA09_10725 805f509d01b5fde4f56fd13693c08aab 554 PRINTS PR00945 Mercuric reductase class II signature 265 282 9.0E-80 T 01-11-2018 CDA09_10725 805f509d01b5fde4f56fd13693c08aab 554 PRINTS PR00945 Mercuric reductase class II signature 16 26 9.0E-80 T 01-11-2018 CDA09_10725 805f509d01b5fde4f56fd13693c08aab 554 PRINTS PR00945 Mercuric reductase class II signature 285 300 9.0E-80 T 01-11-2018 CDA09_10725 805f509d01b5fde4f56fd13693c08aab 554 Gene3D G3DSA:3.30.70.100 5 69 2.3E-16 T 01-11-2018 CDA09_10725 805f509d01b5fde4f56fd13693c08aab 554 Gene3D G3DSA:3.50.50.60 95 412 1.5E-111 T 01-11-2018 IPR036188 FAD/NAD(P)-binding domain superfamily CDA09_17125 8a1e85d1204d7682ba8e7f40b2079061 252 Gene3D G3DSA:3.40.50.720 1 252 4.4E-89 T 01-11-2018 CDA09_17125 8a1e85d1204d7682ba8e7f40b2079061 252 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 13 250 2.9E-74 T 01-11-2018 CDA09_17125 8a1e85d1204d7682ba8e7f40b2079061 252 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 82 93 5.2E-12 T 01-11-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CDA09_17125 8a1e85d1204d7682ba8e7f40b2079061 252 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 135 143 5.2E-12 T 01-11-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CDA09_17125 8a1e85d1204d7682ba8e7f40b2079061 252 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 155 174 5.2E-12 T 01-11-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CDA09_17125 8a1e85d1204d7682ba8e7f40b2079061 252 SMART SM00822 This enzymatic domain is part of bacterial polyketide synthases and catalyses the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain. It uses NADPH to reduce the keto group to a hydroxy group. 7 177 5.5E-4 T 01-11-2018 CDA09_17125 8a1e85d1204d7682ba8e7f40b2079061 252 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 142 170 - T 01-11-2018 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 CDA09_17125 8a1e85d1204d7682ba8e7f40b2079061 252 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 8 25 1.6E-46 T 01-11-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CDA09_17125 8a1e85d1204d7682ba8e7f40b2079061 252 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 82 93 1.6E-46 T 01-11-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CDA09_17125 8a1e85d1204d7682ba8e7f40b2079061 252 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 129 145 1.6E-46 T 01-11-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CDA09_17125 8a1e85d1204d7682ba8e7f40b2079061 252 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 213 233 1.6E-46 T 01-11-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CDA09_17125 8a1e85d1204d7682ba8e7f40b2079061 252 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 155 174 1.6E-46 T 01-11-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CDA09_17125 8a1e85d1204d7682ba8e7f40b2079061 252 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 178 195 1.6E-46 T 01-11-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CDA09_17125 8a1e85d1204d7682ba8e7f40b2079061 252 SUPERFAMILY SSF51735 6 251 2.49E-87 T 01-11-2018 IPR036291 NAD(P)-binding domain superfamily CDA09_04090 7195a2dd3f2c37a1d757c1f5a0d7a412 220 SUPERFAMILY SSF52540 1 217 5.97E-63 T 01-11-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CDA09_04090 7195a2dd3f2c37a1d757c1f5a0d7a412 220 Gene3D G3DSA:3.40.50.300 1 220 5.4E-62 T 01-11-2018 CDA09_04090 7195a2dd3f2c37a1d757c1f5a0d7a412 220 Pfam PF00005 ABC transporter 19 166 1.5E-34 T 01-11-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 CDA09_04090 7195a2dd3f2c37a1d757c1f5a0d7a412 220 SMART SM00382 27 214 3.7E-14 T 01-11-2018 IPR003593 AAA+ ATPase domain CDA09_04090 7195a2dd3f2c37a1d757c1f5a0d7a412 220 ProSitePatterns PS00211 ABC transporters family signature. 138 152 - T 01-11-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 CDA09_22040 33bdfa2cf9904951d654e8e642e020b4 249 Pfam PF14348 Domain of unknown function (DUF4400) 51 246 5.0E-75 T 01-11-2018 IPR022266 Integrating conjugative element protein, PFL4697-type CDA09_22040 33bdfa2cf9904951d654e8e642e020b4 249 TIGRFAM TIGR03747 conj_TIGR03747: integrating conjugative element membrane protein, PFL_4697 family 15 249 3.2E-99 T 01-11-2018 IPR022266 Integrating conjugative element protein, PFL4697-type CDA09_17260 92d436bfd8c4a36fed1f1856f2e3b403 237 Pfam PF13091 PLD-like domain 15 128 4.4E-8 T 01-11-2018 IPR025202 Phospholipase D-like domain Reactome: R-HSA-1483148|Reactome: R-HSA-1483166 CDA09_17260 92d436bfd8c4a36fed1f1856f2e3b403 237 Gene3D G3DSA:3.30.870.10 3 143 2.8E-9 T 01-11-2018 CDA09_17260 92d436bfd8c4a36fed1f1856f2e3b403 237 SUPERFAMILY SSF56024 12 137 1.57E-9 T 01-11-2018 CDA09_09650 f9bbcffb7c234a3afe3b0129d645522d 388 Pfam PF02770 Acyl-CoA dehydrogenase, middle domain 125 218 1.2E-20 T 01-11-2018 IPR006091 Acyl-CoA oxidase/dehydrogenase, central domain GO:0016627|GO:0055114 CDA09_09650 f9bbcffb7c234a3afe3b0129d645522d 388 Pfam PF02771 Acyl-CoA dehydrogenase, N-terminal domain 6 120 1.1E-21 T 01-11-2018 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal GO:0016627|GO:0050660|GO:0055114 CDA09_09650 f9bbcffb7c234a3afe3b0129d645522d 388 Gene3D G3DSA:1.20.140.10 234 388 1.7E-31 T 01-11-2018 CDA09_09650 f9bbcffb7c234a3afe3b0129d645522d 388 Gene3D G3DSA:2.40.110.10 123 233 2.2E-32 T 01-11-2018 CDA09_09650 f9bbcffb7c234a3afe3b0129d645522d 388 SUPERFAMILY SSF47203 230 385 5.64E-18 T 01-11-2018 IPR036250 Acyl-CoA dehydrogenase-like, C-terminal GO:0016627|GO:0055114 CDA09_09650 f9bbcffb7c234a3afe3b0129d645522d 388 Gene3D G3DSA:1.10.540.10 2 118 1.6E-27 T 01-11-2018 IPR037069 Acyl-CoA dehydrogenase/oxidase, N-terminal domain superfamily GO:0016627|GO:0050660|GO:0055114 CDA09_09650 f9bbcffb7c234a3afe3b0129d645522d 388 SUPERFAMILY SSF56645 2 239 1.01E-69 T 01-11-2018 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain superfamily GO:0016627|GO:0055114 CDA09_09650 f9bbcffb7c234a3afe3b0129d645522d 388 Pfam PF00441 Acyl-CoA dehydrogenase, C-terminal domain 230 383 7.4E-19 T 01-11-2018 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal GO:0016627|GO:0055114 CDA09_18875 52c6f2dbc9a26024b22e32c4405e9d7a 204 Pfam PF01810 LysE type translocator 15 201 3.2E-36 T 01-11-2018 IPR001123 Amino acid exporter protein, LeuE-type GO:0006865|GO:0016020 CDA09_18875 52c6f2dbc9a26024b22e32c4405e9d7a 204 PIRSF PIRSF006324 1 204 1.4E-57 T 01-11-2018 IPR001123 Amino acid exporter protein, LeuE-type GO:0006865|GO:0016020 CDA09_09800 106934351694e03d6c2877ec64d7b61d 274 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 168 196 - T 01-11-2018 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 CDA09_09800 106934351694e03d6c2877ec64d7b61d 274 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 202 219 3.4E-45 T 01-11-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CDA09_09800 106934351694e03d6c2877ec64d7b61d 274 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 79 90 3.4E-45 T 01-11-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CDA09_09800 106934351694e03d6c2877ec64d7b61d 274 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 235 255 3.4E-45 T 01-11-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CDA09_09800 106934351694e03d6c2877ec64d7b61d 274 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 156 172 3.4E-45 T 01-11-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CDA09_09800 106934351694e03d6c2877ec64d7b61d 274 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 181 200 3.4E-45 T 01-11-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CDA09_09800 106934351694e03d6c2877ec64d7b61d 274 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 7 24 3.4E-45 T 01-11-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CDA09_09800 106934351694e03d6c2877ec64d7b61d 274 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 162 170 8.7E-15 T 01-11-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CDA09_09800 106934351694e03d6c2877ec64d7b61d 274 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 181 200 8.7E-15 T 01-11-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CDA09_09800 106934351694e03d6c2877ec64d7b61d 274 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 79 90 8.7E-15 T 01-11-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CDA09_09800 106934351694e03d6c2877ec64d7b61d 274 SUPERFAMILY SSF51735 5 271 5.23E-75 T 01-11-2018 IPR036291 NAD(P)-binding domain superfamily CDA09_09800 106934351694e03d6c2877ec64d7b61d 274 Gene3D G3DSA:3.40.50.720 1 273 4.8E-80 T 01-11-2018 CDA09_09800 106934351694e03d6c2877ec64d7b61d 274 Pfam PF00106 short chain dehydrogenase 6 224 8.9E-48 T 01-11-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CDA09_15410 699c6dc09e8c56b2efc3cf5dcb72941c 257 ProSitePatterns PS01137 TatD deoxyribonuclease family signature 1. 2 10 - T 01-11-2018 IPR018228 Deoxyribonuclease, TatD-related, conserved site GO:0016888 CDA09_15410 699c6dc09e8c56b2efc3cf5dcb72941c 257 Pfam PF01026 TatD related DNase 3 251 9.4E-81 T 01-11-2018 IPR001130 TatD family GO:0016788 CDA09_15410 699c6dc09e8c56b2efc3cf5dcb72941c 257 PIRSF PIRSF005902 1 255 1.4E-78 T 01-11-2018 IPR001130 TatD family GO:0016788 CDA09_15410 699c6dc09e8c56b2efc3cf5dcb72941c 257 SUPERFAMILY SSF51556 2 252 8.47E-89 T 01-11-2018 IPR032466 Metal-dependent hydrolase CDA09_15410 699c6dc09e8c56b2efc3cf5dcb72941c 257 TIGRFAM TIGR00010 TIGR00010: hydrolase, TatD family 2 252 1.1E-86 T 01-11-2018 IPR015991 Uncharacterised hydrolase TatD-type GO:0004536 CDA09_15410 699c6dc09e8c56b2efc3cf5dcb72941c 257 ProSitePatterns PS01090 TatD deoxyribonuclease family signature 2. 123 133 - T 01-11-2018 IPR018228 Deoxyribonuclease, TatD-related, conserved site GO:0016888 CDA09_15410 699c6dc09e8c56b2efc3cf5dcb72941c 257 ProSitePatterns PS01091 TatD deoxyribonuclease family signature 3. 188 204 - T 01-11-2018 IPR018228 Deoxyribonuclease, TatD-related, conserved site GO:0016888 CDA09_15410 699c6dc09e8c56b2efc3cf5dcb72941c 257 Gene3D G3DSA:3.20.20.140 1 256 1.0E-92 T 01-11-2018 CDA09_19230 1e18f01f23113ebf2acc399d3973d4eb 355 Hamap MF_01678 Putative methylthioribose-1-phosphate isomerase [mtnA]. 5 353 35.778 T 01-11-2018 IPR005251 Methylthioribose-1-phosphate isomerase GO:0044249 KEGG: 00270+5.3.1.23|MetaCyc: PWY-4361|MetaCyc: PWY-7174|Reactome: R-HSA-1237112 CDA09_19230 1e18f01f23113ebf2acc399d3973d4eb 355 Gene3D G3DSA:3.40.50.10470 186 350 7.5E-49 T 01-11-2018 CDA09_19230 1e18f01f23113ebf2acc399d3973d4eb 355 Gene3D G3DSA:1.20.120.1840 5 185 1.1E-48 T 01-11-2018 CDA09_19230 1e18f01f23113ebf2acc399d3973d4eb 355 SUPERFAMILY SSF100950 3 350 2.3E-105 T 01-11-2018 IPR037171 NagB/RpiA transferase-like CDA09_19230 1e18f01f23113ebf2acc399d3973d4eb 355 TIGRFAM TIGR00524 eIF-2B_rel: eIF-2B alpha/beta/delta-related uncharacterized proteins 35 343 4.5E-87 T 01-11-2018 IPR011559 Initiation factor 2B alpha/beta/delta GO:0044249 KEGG: 00270+5.3.1.23|MetaCyc: PWY-4361|MetaCyc: PWY-7174|Reactome: R-HSA-1237112 CDA09_19230 1e18f01f23113ebf2acc399d3973d4eb 355 Pfam PF01008 Initiation factor 2 subunit family 47 343 2.3E-56 T 01-11-2018 IPR000649 Initiation factor 2B-related GO:0044237 KEGG: 00270+5.3.1.23|MetaCyc: PWY-4361|MetaCyc: PWY-7174 CDA09_19230 1e18f01f23113ebf2acc399d3973d4eb 355 TIGRFAM TIGR00512 salvage_mtnA: S-methyl-5-thioribose-1-phosphate isomerase 9 342 9.4E-120 T 01-11-2018 IPR005251 Methylthioribose-1-phosphate isomerase GO:0044249 KEGG: 00270+5.3.1.23|MetaCyc: PWY-4361|MetaCyc: PWY-7174|Reactome: R-HSA-1237112 CDA09_15745 ba1eda0105f32067b7ebd4503bdae321 806 SUPERFAMILY SSF54211 597 772 8.72E-57 T 01-11-2018 IPR020568 Ribosomal protein S5 domain 2-type fold CDA09_15745 ba1eda0105f32067b7ebd4503bdae321 806 Pfam PF00004 ATPase family associated with various cellular activities (AAA) 354 491 1.9E-17 T 01-11-2018 IPR003959 ATPase, AAA-type, core GO:0005524 CDA09_15745 ba1eda0105f32067b7ebd4503bdae321 806 SUPERFAMILY SSF88697 12 204 7.21E-55 T 01-11-2018 IPR015947 PUA-like superfamily CDA09_15745 ba1eda0105f32067b7ebd4503bdae321 806 Gene3D G3DSA:2.30.130.40 6 120 1.6E-36 T 01-11-2018 CDA09_15745 ba1eda0105f32067b7ebd4503bdae321 806 TIGRFAM TIGR00763 lon: endopeptidase La 15 773 9.4E-295 T 01-11-2018 IPR004815 Lon protease, bacterial/eukaryotic-type GO:0004176|GO:0005524|GO:0006508 CDA09_15745 ba1eda0105f32067b7ebd4503bdae321 806 Pfam PF02190 ATP-dependent protease La (LON) substrate-binding domain 13 204 6.9E-47 T 01-11-2018 IPR003111 Lon, substrate-binding domain CDA09_15745 ba1eda0105f32067b7ebd4503bdae321 806 Gene3D G3DSA:1.10.8.60 493 586 1.3E-31 T 01-11-2018 CDA09_15745 ba1eda0105f32067b7ebd4503bdae321 806 PIRSF PIRSF001174 3 777 0.0 T 01-11-2018 IPR004815 Lon protease, bacterial/eukaryotic-type GO:0004176|GO:0005524|GO:0006508 CDA09_15745 ba1eda0105f32067b7ebd4503bdae321 806 PRINTS PR00830 Endopeptidase La (Lon) serine protease (S16) signature 597 613 4.2E-52 T 01-11-2018 CDA09_15745 ba1eda0105f32067b7ebd4503bdae321 806 PRINTS PR00830 Endopeptidase La (Lon) serine protease (S16) signature 358 377 4.2E-52 T 01-11-2018 CDA09_15745 ba1eda0105f32067b7ebd4503bdae321 806 PRINTS PR00830 Endopeptidase La (Lon) serine protease (S16) signature 675 694 4.2E-52 T 01-11-2018 CDA09_15745 ba1eda0105f32067b7ebd4503bdae321 806 PRINTS PR00830 Endopeptidase La (Lon) serine protease (S16) signature 728 746 4.2E-52 T 01-11-2018 CDA09_15745 ba1eda0105f32067b7ebd4503bdae321 806 PRINTS PR00830 Endopeptidase La (Lon) serine protease (S16) signature 705 724 4.2E-52 T 01-11-2018 CDA09_15745 ba1eda0105f32067b7ebd4503bdae321 806 SUPERFAMILY SSF52540 315 588 1.05E-49 T 01-11-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CDA09_15745 ba1eda0105f32067b7ebd4503bdae321 806 Gene3D G3DSA:1.20.58.1480 123 248 6.7E-45 T 01-11-2018 CDA09_15745 ba1eda0105f32067b7ebd4503bdae321 806 Gene3D G3DSA:3.30.230.10 587 774 7.1E-78 T 01-11-2018 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup CDA09_15745 ba1eda0105f32067b7ebd4503bdae321 806 SMART SM00382 350 494 7.7E-10 T 01-11-2018 IPR003593 AAA+ ATPase domain CDA09_15745 ba1eda0105f32067b7ebd4503bdae321 806 Pfam PF05362 Lon protease (S16) C-terminal proteolytic domain 572 774 1.4E-94 T 01-11-2018 IPR008269 Peptidase S16, Lon proteolytic domain GO:0004176|GO:0004252|GO:0006508 CDA09_15745 ba1eda0105f32067b7ebd4503bdae321 806 Gene3D G3DSA:3.40.50.300 316 492 1.8E-62 T 01-11-2018 CDA09_15745 ba1eda0105f32067b7ebd4503bdae321 806 Hamap MF_01973 Lon protease [lon]. 14 774 70.824 T 01-11-2018 IPR027543 Lon protease, bacterial GO:0004176|GO:0004252|GO:0005524|GO:0006508|GO:0043565 CDA09_15745 ba1eda0105f32067b7ebd4503bdae321 806 SMART SM00464 13 205 1.0E-77 T 01-11-2018 IPR003111 Lon, substrate-binding domain CDA09_15745 ba1eda0105f32067b7ebd4503bdae321 806 ProSitePatterns PS01046 ATP-dependent serine proteases, lon family, serine active site. 678 686 - T 01-11-2018 IPR008268 Peptidase S16, active site GO:0004176|GO:0004252|GO:0006508 CDA09_04835 18f91414ff8bd0245001ecc6d516959b 325 Pfam PF00589 Phage integrase family 181 316 3.1E-15 T 01-11-2018 IPR002104 Integrase, catalytic domain GO:0003677|GO:0006310|GO:0015074 CDA09_04835 18f91414ff8bd0245001ecc6d516959b 325 Gene3D G3DSA:1.10.443.10 163 322 6.4E-30 T 01-11-2018 IPR013762 Integrase-like, catalytic domain superfamily GO:0003677|GO:0006310|GO:0015074 CDA09_04835 18f91414ff8bd0245001ecc6d516959b 325 Gene3D G3DSA:1.10.150.130 61 159 6.9E-11 T 01-11-2018 IPR010998 Integrase/recombinase, N-terminal CDA09_04835 18f91414ff8bd0245001ecc6d516959b 325 SUPERFAMILY SSF56349 61 319 4.24E-49 T 01-11-2018 IPR011010 DNA breaking-rejoining enzyme, catalytic core GO:0003677 CDA09_22625 b46d7b850ae8d7543c509d56164125e5 392 SUPERFAMILY SSF47203 232 384 8.22E-52 T 01-11-2018 IPR036250 Acyl-CoA dehydrogenase-like, C-terminal GO:0016627|GO:0055114 CDA09_22625 b46d7b850ae8d7543c509d56164125e5 392 Gene3D G3DSA:1.10.540.10 8 127 4.6E-24 T 01-11-2018 IPR037069 Acyl-CoA dehydrogenase/oxidase, N-terminal domain superfamily GO:0016627|GO:0050660|GO:0055114 CDA09_22625 b46d7b850ae8d7543c509d56164125e5 392 Pfam PF02770 Acyl-CoA dehydrogenase, middle domain 129 220 1.6E-22 T 01-11-2018 IPR006091 Acyl-CoA oxidase/dehydrogenase, central domain GO:0016627|GO:0055114 CDA09_22625 b46d7b850ae8d7543c509d56164125e5 392 SUPERFAMILY SSF56645 35 245 1.02E-57 T 01-11-2018 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain superfamily GO:0016627|GO:0055114 CDA09_22625 b46d7b850ae8d7543c509d56164125e5 392 Gene3D G3DSA:2.40.110.10 128 238 7.0E-46 T 01-11-2018 CDA09_22625 b46d7b850ae8d7543c509d56164125e5 392 Pfam PF02771 Acyl-CoA dehydrogenase, N-terminal domain 15 124 6.4E-10 T 01-11-2018 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal GO:0016627|GO:0050660|GO:0055114 CDA09_22625 b46d7b850ae8d7543c509d56164125e5 392 Gene3D G3DSA:1.20.140.10 239 382 7.6E-48 T 01-11-2018 CDA09_22625 b46d7b850ae8d7543c509d56164125e5 392 ProSitePatterns PS00072 Acyl-CoA dehydrogenases signature 1. 131 143 - T 01-11-2018 IPR006089 Acyl-CoA dehydrogenase, conserved site GO:0003995|GO:0055114 CDA09_22625 b46d7b850ae8d7543c509d56164125e5 392 ProSitePatterns PS00073 Acyl-CoA dehydrogenases signature 2. 341 360 - T 01-11-2018 IPR006089 Acyl-CoA dehydrogenase, conserved site GO:0003995|GO:0055114 CDA09_22625 b46d7b850ae8d7543c509d56164125e5 392 Pfam PF00441 Acyl-CoA dehydrogenase, C-terminal domain 234 382 7.8E-47 T 01-11-2018 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal GO:0016627|GO:0055114 CDA09_11910 5858580c1e4609a5c790ae108a4e9719 263 Pfam PF16123 Hydroxyacylglutathione hydrolase C-terminus 176 263 1.5E-24 T 01-11-2018 IPR032282 Hydroxyacylglutathione hydrolase, C-terminal domain KEGG: 00620+3.1.2.6|MetaCyc: PWY-5386 CDA09_11910 5858580c1e4609a5c790ae108a4e9719 263 Pfam PF00753 Metallo-beta-lactamase superfamily 22 175 2.7E-17 T 01-11-2018 IPR001279 Metallo-beta-lactamase CDA09_11910 5858580c1e4609a5c790ae108a4e9719 263 Hamap MF_01374 Hydroxyacylglutathione hydrolase [gloB]. 11 263 39.893 T 01-11-2018 IPR017782 Hydroxyacylglutathione hydrolase GO:0004416|GO:0019243 KEGG: 00620+3.1.2.6|MetaCyc: PWY-5386 CDA09_11910 5858580c1e4609a5c790ae108a4e9719 263 SMART SM00849 21 175 1.9E-29 T 01-11-2018 IPR001279 Metallo-beta-lactamase CDA09_11910 5858580c1e4609a5c790ae108a4e9719 263 PIRSF PIRSF005457 6 263 1.3E-88 T 01-11-2018 IPR017782 Hydroxyacylglutathione hydrolase GO:0004416|GO:0019243 KEGG: 00620+3.1.2.6|MetaCyc: PWY-5386 CDA09_11910 5858580c1e4609a5c790ae108a4e9719 263 TIGRFAM TIGR03413 GSH_gloB: hydroxyacylglutathione hydrolase 13 263 2.9E-93 T 01-11-2018 IPR017782 Hydroxyacylglutathione hydrolase GO:0004416|GO:0019243 KEGG: 00620+3.1.2.6|MetaCyc: PWY-5386 CDA09_11910 5858580c1e4609a5c790ae108a4e9719 263 SUPERFAMILY SSF56281 13 263 2.62E-61 T 01-11-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like CDA09_11910 5858580c1e4609a5c790ae108a4e9719 263 Gene3D G3DSA:3.60.15.10 5 263 5.5E-78 T 01-11-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like CDA09_14765 315a5b6b042732d9a3a06236db4d1541 726 SMART SM00091 157 223 7.9E-11 T 01-11-2018 IPR000014 PAS domain CDA09_14765 315a5b6b042732d9a3a06236db4d1541 726 SUPERFAMILY SSF55073 301 459 1.88E-49 T 01-11-2018 IPR029787 Nucleotide cyclase CDA09_14765 315a5b6b042732d9a3a06236db4d1541 726 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 294 454 1.2E-36 T 01-11-2018 IPR000160 GGDEF domain CDA09_14765 315a5b6b042732d9a3a06236db4d1541 726 Gene3D G3DSA:3.30.450.20 146 291 2.3E-24 T 01-11-2018 CDA09_14765 315a5b6b042732d9a3a06236db4d1541 726 SUPERFAMILY SSF141868 473 719 4.18E-88 T 01-11-2018 IPR035919 EAL domain superfamily CDA09_14765 315a5b6b042732d9a3a06236db4d1541 726 Pfam PF00990 Diguanylate cyclase, GGDEF domain 297 452 2.2E-47 T 01-11-2018 IPR000160 GGDEF domain CDA09_14765 315a5b6b042732d9a3a06236db4d1541 726 SMART SM00052 467 713 8.8E-115 T 01-11-2018 IPR001633 EAL domain CDA09_14765 315a5b6b042732d9a3a06236db4d1541 726 Gene3D G3DSA:3.40.50.2300 21 140 4.1E-27 T 01-11-2018 CDA09_14765 315a5b6b042732d9a3a06236db4d1541 726 SMART SM00448 21 132 2.9E-21 T 01-11-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 CDA09_14765 315a5b6b042732d9a3a06236db4d1541 726 SUPERFAMILY SSF52172 21 180 1.57E-32 T 01-11-2018 IPR011006 CheY-like superfamily CDA09_14765 315a5b6b042732d9a3a06236db4d1541 726 Pfam PF08447 PAS fold 180 251 1.4E-8 T 01-11-2018 IPR013655 PAS fold-3 GO:0005515 CDA09_14765 315a5b6b042732d9a3a06236db4d1541 726 Gene3D G3DSA:3.30.70.270 292 469 5.0E-58 T 01-11-2018 CDA09_14765 315a5b6b042732d9a3a06236db4d1541 726 Pfam PF00072 Response regulator receiver domain 23 132 9.3E-21 T 01-11-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 CDA09_14765 315a5b6b042732d9a3a06236db4d1541 726 SMART SM00267 285 457 5.3E-58 T 01-11-2018 IPR000160 GGDEF domain CDA09_14765 315a5b6b042732d9a3a06236db4d1541 726 Gene3D G3DSA:3.20.20.450 470 722 6.3E-99 T 01-11-2018 IPR035919 EAL domain superfamily CDA09_14765 315a5b6b042732d9a3a06236db4d1541 726 SUPERFAMILY SSF55785 146 283 2.74E-20 T 01-11-2018 IPR035965 PAS domain superfamily CDA09_14765 315a5b6b042732d9a3a06236db4d1541 726 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 153 291 9.5E-17 T 01-11-2018 IPR000014 PAS domain CDA09_14765 315a5b6b042732d9a3a06236db4d1541 726 Pfam PF00563 EAL domain 473 708 3.1E-70 T 01-11-2018 IPR001633 EAL domain CDA09_04580 10772f770a0dd27edfd179ea48d6722b 699 SUPERFAMILY SSF55785 120 249 1.12E-19 T 01-11-2018 IPR035965 PAS domain superfamily CDA09_04580 10772f770a0dd27edfd179ea48d6722b 699 Gene3D G3DSA:3.20.20.450 436 692 6.1E-95 T 01-11-2018 IPR035919 EAL domain superfamily CDA09_04580 10772f770a0dd27edfd179ea48d6722b 699 Pfam PF00989 PAS fold 136 248 6.4E-6 T 01-11-2018 IPR013767 PAS fold GO:0006355 CDA09_04580 10772f770a0dd27edfd179ea48d6722b 699 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 258 419 5.5E-42 T 01-11-2018 IPR000160 GGDEF domain CDA09_04580 10772f770a0dd27edfd179ea48d6722b 699 SMART SM00086 82 123 9.8E-4 T 01-11-2018 IPR001610 PAC motif CDA09_04580 10772f770a0dd27edfd179ea48d6722b 699 SMART SM00086 209 251 3.8E-5 T 01-11-2018 IPR001610 PAC motif CDA09_04580 10772f770a0dd27edfd179ea48d6722b 699 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 22 130 6.1E-14 T 01-11-2018 IPR000014 PAS domain CDA09_04580 10772f770a0dd27edfd179ea48d6722b 699 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 132 258 5.0E-15 T 01-11-2018 IPR000014 PAS domain CDA09_04580 10772f770a0dd27edfd179ea48d6722b 699 SMART SM00091 135 206 0.79 T 01-11-2018 IPR000014 PAS domain CDA09_04580 10772f770a0dd27edfd179ea48d6722b 699 SMART SM00091 5 76 5.6E-6 T 01-11-2018 IPR000014 PAS domain CDA09_04580 10772f770a0dd27edfd179ea48d6722b 699 SMART SM00052 432 677 6.5E-107 T 01-11-2018 IPR001633 EAL domain CDA09_04580 10772f770a0dd27edfd179ea48d6722b 699 Gene3D G3DSA:3.30.70.270 261 435 1.0E-59 T 01-11-2018 CDA09_04580 10772f770a0dd27edfd179ea48d6722b 699 SUPERFAMILY SSF55073 267 423 4.32E-48 T 01-11-2018 IPR029787 Nucleotide cyclase CDA09_04580 10772f770a0dd27edfd179ea48d6722b 699 Pfam PF00990 Diguanylate cyclase, GGDEF domain 262 417 5.8E-46 T 01-11-2018 IPR000160 GGDEF domain CDA09_04580 10772f770a0dd27edfd179ea48d6722b 699 SUPERFAMILY SSF141868 437 684 6.28E-83 T 01-11-2018 IPR035919 EAL domain superfamily CDA09_04580 10772f770a0dd27edfd179ea48d6722b 699 Gene3D G3DSA:3.30.450.20 134 260 7.2E-18 T 01-11-2018 CDA09_04580 10772f770a0dd27edfd179ea48d6722b 699 Pfam PF08447 PAS fold 31 110 3.4E-19 T 01-11-2018 IPR013655 PAS fold-3 GO:0005515 CDA09_04580 10772f770a0dd27edfd179ea48d6722b 699 Gene3D G3DSA:3.30.450.20 4 121 1.2E-24 T 01-11-2018 CDA09_04580 10772f770a0dd27edfd179ea48d6722b 699 Pfam PF00563 EAL domain 438 672 3.2E-69 T 01-11-2018 IPR001633 EAL domain CDA09_04580 10772f770a0dd27edfd179ea48d6722b 699 SUPERFAMILY SSF55785 10 124 5.32E-21 T 01-11-2018 IPR035965 PAS domain superfamily CDA09_04580 10772f770a0dd27edfd179ea48d6722b 699 SMART SM00267 251 422 3.8E-61 T 01-11-2018 IPR000160 GGDEF domain CDA09_18140 f70dab13d63edd054ff6bb3d44a41c01 907 SMART SM00958 228 357 2.5E-76 T 01-11-2018 IPR011130 SecA, preprotein cross-linking domain GO:0016020|GO:0017038 CDA09_18140 f70dab13d63edd054ff6bb3d44a41c01 907 ProSitePatterns PS01312 SecA family signature. 499 514 - T 01-11-2018 IPR020937 SecA conserved site GO:0006605|GO:0006886|GO:0016020 CDA09_18140 f70dab13d63edd054ff6bb3d44a41c01 907 Hamap MF_01382 Protein translocase subunit SecA [secA]. 5 838 19.891 T 01-11-2018 IPR000185 Protein translocase subunit SecA GO:0005524|GO:0006605|GO:0006886 CDA09_18140 f70dab13d63edd054ff6bb3d44a41c01 907 Gene3D G3DSA:3.90.1440.10 229 367 2.9E-177 T 01-11-2018 CDA09_18140 f70dab13d63edd054ff6bb3d44a41c01 907 Pfam PF01043 SecA preprotein cross-linking domain 232 357 1.0E-35 T 01-11-2018 IPR011130 SecA, preprotein cross-linking domain GO:0016020|GO:0017038 CDA09_18140 f70dab13d63edd054ff6bb3d44a41c01 907 Gene3D G3DSA:3.10.450.50 853 906 4.9E-9 T 01-11-2018 CDA09_18140 f70dab13d63edd054ff6bb3d44a41c01 907 SUPERFAMILY SSF81767 227 367 7.06E-43 T 01-11-2018 IPR036670 SecA, preprotein cross-linking domain superfamily GO:0016020|GO:0017038 CDA09_18140 f70dab13d63edd054ff6bb3d44a41c01 907 TIGRFAM TIGR00963 secA: preprotein translocase, SecA subunit 28 823 0.0 T 01-11-2018 IPR000185 Protein translocase subunit SecA GO:0005524|GO:0006605|GO:0006886 CDA09_18140 f70dab13d63edd054ff6bb3d44a41c01 907 SUPERFAMILY SSF81886 626 895 3.14E-81 T 01-11-2018 IPR036266 SecA, Wing/Scaffold superfamily CDA09_18140 f70dab13d63edd054ff6bb3d44a41c01 907 Gene3D G3DSA:1.10.3060.10 627 839 7.8E-72 T 01-11-2018 CDA09_18140 f70dab13d63edd054ff6bb3d44a41c01 907 Pfam PF07517 SecA DEAD-like domain 6 400 5.0E-134 T 01-11-2018 IPR011115 SecA DEAD-like, N-terminal GO:0005524|GO:0016020|GO:0017038 CDA09_18140 f70dab13d63edd054ff6bb3d44a41c01 907 Gene3D G3DSA:3.40.50.300 416 626 1.1E-85 T 01-11-2018 CDA09_18140 f70dab13d63edd054ff6bb3d44a41c01 907 Pfam PF07516 SecA Wing and Scaffold domain 623 836 6.6E-65 T 01-11-2018 IPR011116 SecA Wing/Scaffold GO:0016020|GO:0017038 CDA09_18140 f70dab13d63edd054ff6bb3d44a41c01 907 PRINTS PR00906 SecA protein signature 117 127 8.0E-73 T 01-11-2018 IPR000185 Protein translocase subunit SecA GO:0005524|GO:0006605|GO:0006886 CDA09_18140 f70dab13d63edd054ff6bb3d44a41c01 907 PRINTS PR00906 SecA protein signature 101 115 8.0E-73 T 01-11-2018 IPR000185 Protein translocase subunit SecA GO:0005524|GO:0006605|GO:0006886 CDA09_18140 f70dab13d63edd054ff6bb3d44a41c01 907 PRINTS PR00906 SecA protein signature 412 425 8.0E-73 T 01-11-2018 IPR000185 Protein translocase subunit SecA GO:0005524|GO:0006605|GO:0006886 CDA09_18140 f70dab13d63edd054ff6bb3d44a41c01 907 PRINTS PR00906 SecA protein signature 63 87 8.0E-73 T 01-11-2018 IPR000185 Protein translocase subunit SecA GO:0005524|GO:0006605|GO:0006886 CDA09_18140 f70dab13d63edd054ff6bb3d44a41c01 907 PRINTS PR00906 SecA protein signature 375 392 8.0E-73 T 01-11-2018 IPR000185 Protein translocase subunit SecA GO:0005524|GO:0006605|GO:0006886 CDA09_18140 f70dab13d63edd054ff6bb3d44a41c01 907 PRINTS PR00906 SecA protein signature 170 190 8.0E-73 T 01-11-2018 IPR000185 Protein translocase subunit SecA GO:0005524|GO:0006605|GO:0006886 CDA09_18140 f70dab13d63edd054ff6bb3d44a41c01 907 PRINTS PR00906 SecA protein signature 338 360 8.0E-73 T 01-11-2018 IPR000185 Protein translocase subunit SecA GO:0005524|GO:0006605|GO:0006886 CDA09_18140 f70dab13d63edd054ff6bb3d44a41c01 907 Gene3D G3DSA:3.40.50.300 22 414 2.9E-177 T 01-11-2018 CDA09_18140 f70dab13d63edd054ff6bb3d44a41c01 907 SUPERFAMILY SSF52540 5 414 3.5E-85 T 01-11-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CDA09_18140 f70dab13d63edd054ff6bb3d44a41c01 907 SUPERFAMILY SSF52540 415 624 3.36E-55 T 01-11-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CDA09_18140 f70dab13d63edd054ff6bb3d44a41c01 907 Pfam PF02810 SEC-C motif 887 905 1.8E-10 T 01-11-2018 IPR004027 SEC-C motif CDA09_18140 f70dab13d63edd054ff6bb3d44a41c01 907 SMART SM00957 6 401 0.0 T 01-11-2018 IPR011115 SecA DEAD-like, N-terminal GO:0005524|GO:0016020|GO:0017038 CDA09_02700 ddf51983c444c7c855ef63f9755f3acb 122 Pfam PF10861 Protein of Unknown function (DUF2784) 2 108 2.8E-38 T 01-11-2018 IPR021218 Protein of unknown function DUF2784 CDA09_08020 97e0ab7df8eeb0723460c8bb3d47a44a 422 Gene3D G3DSA:3.50.50.60 4 307 2.3E-86 T 01-11-2018 IPR036188 FAD/NAD(P)-binding domain superfamily CDA09_08020 97e0ab7df8eeb0723460c8bb3d47a44a 422 SUPERFAMILY SSF51905 2 309 4.63E-42 T 01-11-2018 IPR036188 FAD/NAD(P)-binding domain superfamily CDA09_08020 97e0ab7df8eeb0723460c8bb3d47a44a 422 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 264 282 3.9E-11 T 01-11-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 CDA09_08020 97e0ab7df8eeb0723460c8bb3d47a44a 422 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 197 213 3.9E-11 T 01-11-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 CDA09_08020 97e0ab7df8eeb0723460c8bb3d47a44a 422 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 99 107 3.9E-11 T 01-11-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 CDA09_08020 97e0ab7df8eeb0723460c8bb3d47a44a 422 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 2 24 3.9E-11 T 01-11-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 CDA09_08020 97e0ab7df8eeb0723460c8bb3d47a44a 422 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 98 116 8.2E-25 T 01-11-2018 CDA09_08020 97e0ab7df8eeb0723460c8bb3d47a44a 422 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 143 161 8.2E-25 T 01-11-2018 CDA09_08020 97e0ab7df8eeb0723460c8bb3d47a44a 422 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 254 276 8.2E-25 T 01-11-2018 CDA09_08020 97e0ab7df8eeb0723460c8bb3d47a44a 422 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 229 245 8.2E-25 T 01-11-2018 CDA09_08020 97e0ab7df8eeb0723460c8bb3d47a44a 422 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 3 22 8.2E-25 T 01-11-2018 CDA09_08020 97e0ab7df8eeb0723460c8bb3d47a44a 422 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 2 286 1.6E-53 T 01-11-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 CDA09_08020 97e0ab7df8eeb0723460c8bb3d47a44a 422 Gene3D G3DSA:3.50.50.60 111 236 2.3E-86 T 01-11-2018 IPR036188 FAD/NAD(P)-binding domain superfamily CDA09_16275 428a4ece27f009de2e2684613bb417e1 631 Gene3D G3DSA:1.20.58.760 407 609 3.5E-74 T 01-11-2018 CDA09_16275 428a4ece27f009de2e2684613bb417e1 631 SUPERFAMILY SSF52540 149 396 1.46E-72 T 01-11-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CDA09_16275 428a4ece27f009de2e2684613bb417e1 631 Hamap MF_01458 ATP-dependent zinc metalloprotease FtsH [ftsH]. 3 602 37.139 T 01-11-2018 IPR005936 Peptidase, FtsH GO:0004222|GO:0016020 Reactome: R-HSA-8949664 CDA09_16275 428a4ece27f009de2e2684613bb417e1 631 Gene3D G3DSA:2.40.50.920 27 105 1.6E-8 T 01-11-2018 CDA09_16275 428a4ece27f009de2e2684613bb417e1 631 Gene3D G3DSA:3.40.50.300 142 327 3.0E-69 T 01-11-2018 CDA09_16275 428a4ece27f009de2e2684613bb417e1 631 TIGRFAM TIGR01241 FtsH_fam: ATP-dependent metallopeptidase HflB 104 596 1.4E-238 T 01-11-2018 IPR005936 Peptidase, FtsH GO:0004222|GO:0016020 Reactome: R-HSA-8949664 CDA09_16275 428a4ece27f009de2e2684613bb417e1 631 SUPERFAMILY SSF140990 407 605 6.54E-74 T 01-11-2018 IPR037219 Peptidase M41-like GO:0004222|GO:0005524|GO:0006508 Reactome: R-HSA-8949664 CDA09_16275 428a4ece27f009de2e2684613bb417e1 631 Gene3D G3DSA:1.10.8.60 328 404 2.6E-28 T 01-11-2018 CDA09_16275 428a4ece27f009de2e2684613bb417e1 631 SMART SM00382 189 328 1.2E-25 T 01-11-2018 IPR003593 AAA+ ATPase domain CDA09_16275 428a4ece27f009de2e2684613bb417e1 631 Pfam PF01434 Peptidase family M41 387 595 1.2E-79 T 01-11-2018 IPR000642 Peptidase M41 GO:0004222|GO:0005524|GO:0006508 Reactome: R-HSA-8949664 CDA09_16275 428a4ece27f009de2e2684613bb417e1 631 Pfam PF00004 ATPase family associated with various cellular activities (AAA) 193 325 6.5E-46 T 01-11-2018 IPR003959 ATPase, AAA-type, core GO:0005524 CDA09_16275 428a4ece27f009de2e2684613bb417e1 631 ProSitePatterns PS00674 AAA-protein family signature. 296 314 - T 01-11-2018 IPR003960 ATPase, AAA-type, conserved site GO:0005524 CDA09_16275 428a4ece27f009de2e2684613bb417e1 631 Pfam PF06480 FtsH Extracellular 9 76 4.0E-8 T 01-11-2018 IPR011546 Peptidase M41, FtsH extracellular GO:0004222|GO:0005524|GO:0008270|GO:0016021 Reactome: R-HSA-8949664 CDA09_16175 e18f7aab9c35d8b9fead203637e897af 673 PRINTS PR01435 NADH-plastoquinone oxidoreductase chain 5 signature 86 106 2.4E-17 T 01-11-2018 IPR018393 NADH-plastoquinone oxidoreductase, chain 5 subgroup GO:0008137|GO:0042773|GO:0055114 CDA09_16175 e18f7aab9c35d8b9fead203637e897af 673 PRINTS PR01435 NADH-plastoquinone oxidoreductase chain 5 signature 272 294 2.4E-17 T 01-11-2018 IPR018393 NADH-plastoquinone oxidoreductase, chain 5 subgroup GO:0008137|GO:0042773|GO:0055114 CDA09_16175 e18f7aab9c35d8b9fead203637e897af 673 PRINTS PR01435 NADH-plastoquinone oxidoreductase chain 5 signature 426 448 2.4E-17 T 01-11-2018 IPR018393 NADH-plastoquinone oxidoreductase, chain 5 subgroup GO:0008137|GO:0042773|GO:0055114 CDA09_16175 e18f7aab9c35d8b9fead203637e897af 673 PRINTS PR01435 NADH-plastoquinone oxidoreductase chain 5 signature 60 84 2.4E-17 T 01-11-2018 IPR018393 NADH-plastoquinone oxidoreductase, chain 5 subgroup GO:0008137|GO:0042773|GO:0055114 CDA09_16175 e18f7aab9c35d8b9fead203637e897af 673 PRINTS PR01435 NADH-plastoquinone oxidoreductase chain 5 signature 489 510 2.4E-17 T 01-11-2018 IPR018393 NADH-plastoquinone oxidoreductase, chain 5 subgroup GO:0008137|GO:0042773|GO:0055114 CDA09_16175 e18f7aab9c35d8b9fead203637e897af 673 Pfam PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus 66 123 2.3E-28 T 01-11-2018 IPR001516 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminal Reactome: R-HSA-611105|Reactome: R-HSA-6799198 CDA09_16175 e18f7aab9c35d8b9fead203637e897af 673 PRINTS PR01434 NADH-ubiquinone oxidoreductase chain 5 signature 84 109 8.2E-67 T 01-11-2018 CDA09_16175 e18f7aab9c35d8b9fead203637e897af 673 PRINTS PR01434 NADH-ubiquinone oxidoreductase chain 5 signature 159 180 8.2E-67 T 01-11-2018 CDA09_16175 e18f7aab9c35d8b9fead203637e897af 673 PRINTS PR01434 NADH-ubiquinone oxidoreductase chain 5 signature 427 446 8.2E-67 T 01-11-2018 CDA09_16175 e18f7aab9c35d8b9fead203637e897af 673 PRINTS PR01434 NADH-ubiquinone oxidoreductase chain 5 signature 322 334 8.2E-67 T 01-11-2018 CDA09_16175 e18f7aab9c35d8b9fead203637e897af 673 PRINTS PR01434 NADH-ubiquinone oxidoreductase chain 5 signature 232 253 8.2E-67 T 01-11-2018 CDA09_16175 e18f7aab9c35d8b9fead203637e897af 673 PRINTS PR01434 NADH-ubiquinone oxidoreductase chain 5 signature 112 132 8.2E-67 T 01-11-2018 CDA09_16175 e18f7aab9c35d8b9fead203637e897af 673 PRINTS PR01434 NADH-ubiquinone oxidoreductase chain 5 signature 254 280 8.2E-67 T 01-11-2018 CDA09_16175 e18f7aab9c35d8b9fead203637e897af 673 Pfam PF00361 Proton-conducting membrane transporter 135 416 2.9E-85 T 01-11-2018 IPR001750 NADH:quinone oxidoreductase/Mrp antiporter, membrane subunit Reactome: R-HSA-611105|Reactome: R-HSA-6799198 CDA09_16175 e18f7aab9c35d8b9fead203637e897af 673 TIGRFAM TIGR01974 NDH_I_L: proton-translocating NADH-quinone oxidoreductase, chain L 7 668 3.8E-243 T 01-11-2018 IPR003945 NADH-plastoquinone oxidoreductase, chain 5 GO:0008137|GO:0042773|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 CDA09_15940 4397645041c1288ab1b21855b1a4399d 183 SUPERFAMILY SSF53098 2 180 9.02E-49 T 01-11-2018 IPR012337 Ribonuclease H-like superfamily CDA09_15940 4397645041c1288ab1b21855b1a4399d 183 Hamap MF_00045 Oligoribonuclease [orn]. 3 181 43.341 T 01-11-2018 IPR022894 Oligoribonuclease GO:0000175 CDA09_15940 4397645041c1288ab1b21855b1a4399d 183 Gene3D G3DSA:3.30.420.10 1 182 2.3E-72 T 01-11-2018 IPR036397 Ribonuclease H superfamily GO:0003676 CDA09_15940 4397645041c1288ab1b21855b1a4399d 183 Pfam PF00929 Exonuclease 9 169 2.4E-31 T 01-11-2018 IPR013520 Exonuclease, RNase T/DNA polymerase III CDA09_15940 4397645041c1288ab1b21855b1a4399d 183 SMART SM00479 7 180 5.5E-20 T 01-11-2018 IPR013520 Exonuclease, RNase T/DNA polymerase III CDA09_18175 1eaaffc0a9409408b7a1d76d4db23827 304 PIRSF PIRSF039102 46 303 1.5E-78 T 01-11-2018 IPR005905 D-alanine--D-alanine ligase GO:0005737|GO:0008716 KEGG: 00473+6.3.2.4|KEGG: 00550+6.3.2.4|MetaCyc: PWY-6386|MetaCyc: PWY-6387|MetaCyc: PWY-7953 CDA09_18175 1eaaffc0a9409408b7a1d76d4db23827 304 PIRSF PIRSF039102 3 51 7.9E-7 T 01-11-2018 IPR005905 D-alanine--D-alanine ligase GO:0005737|GO:0008716 KEGG: 00473+6.3.2.4|KEGG: 00550+6.3.2.4|MetaCyc: PWY-6386|MetaCyc: PWY-6387|MetaCyc: PWY-7953 CDA09_18175 1eaaffc0a9409408b7a1d76d4db23827 304 Hamap MF_00047 D-alanine--D-alanine ligase [ddl]. 6 302 33.267 T 01-11-2018 IPR005905 D-alanine--D-alanine ligase GO:0005737|GO:0008716 KEGG: 00473+6.3.2.4|KEGG: 00550+6.3.2.4|MetaCyc: PWY-6386|MetaCyc: PWY-6387|MetaCyc: PWY-7953 CDA09_18175 1eaaffc0a9409408b7a1d76d4db23827 304 Gene3D G3DSA:3.30.1490.20 114 179 1.7E-69 T 01-11-2018 IPR013815 ATP-grasp fold, subdomain 1 GO:0005524 CDA09_18175 1eaaffc0a9409408b7a1d76d4db23827 304 ProSitePatterns PS00844 D-alanine--D-alanine ligase signature 2. 244 272 - T 01-11-2018 IPR000291 D-alanine--D-alanine ligase/VANA/B/C, conserved site KEGG: 00473+6.3.2.4|KEGG: 00550+6.3.2.4|MetaCyc: PWY-6386|MetaCyc: PWY-6387|MetaCyc: PWY-7953 CDA09_18175 1eaaffc0a9409408b7a1d76d4db23827 304 Pfam PF01820 D-ala D-ala ligase N-terminus 7 89 1.1E-17 T 01-11-2018 IPR011127 D-alanine--D-alanine ligase, N-terminal domain KEGG: 00473+6.3.2.4|KEGG: 00550+6.3.2.4|MetaCyc: PWY-6386|MetaCyc: PWY-6387|MetaCyc: PWY-7953 CDA09_18175 1eaaffc0a9409408b7a1d76d4db23827 304 Gene3D G3DSA:3.40.50.20 1 87 1.1E-30 T 01-11-2018 CDA09_18175 1eaaffc0a9409408b7a1d76d4db23827 304 SUPERFAMILY SSF56059 100 299 3.87E-57 T 01-11-2018 CDA09_18175 1eaaffc0a9409408b7a1d76d4db23827 304 Gene3D G3DSA:3.30.470.20 88 296 1.7E-69 T 01-11-2018 CDA09_18175 1eaaffc0a9409408b7a1d76d4db23827 304 TIGRFAM TIGR01205 D_ala_D_alaTIGR: D-alanine--D-alanine ligase 7 301 7.2E-97 T 01-11-2018 IPR005905 D-alanine--D-alanine ligase GO:0005737|GO:0008716 KEGG: 00473+6.3.2.4|KEGG: 00550+6.3.2.4|MetaCyc: PWY-6386|MetaCyc: PWY-6387|MetaCyc: PWY-7953 CDA09_18175 1eaaffc0a9409408b7a1d76d4db23827 304 Pfam PF07478 D-ala D-ala ligase C-terminus 107 298 3.0E-50 T 01-11-2018 IPR011095 D-alanine--D-alanine ligase, C-terminal GO:0008716 KEGG: 00473+6.3.2.4|KEGG: 00550+6.3.2.4|MetaCyc: PWY-6386|MetaCyc: PWY-6387|MetaCyc: PWY-7953 CDA09_18175 1eaaffc0a9409408b7a1d76d4db23827 304 ProSitePatterns PS00843 D-alanine--D-alanine ligase signature 1. 66 77 - T 01-11-2018 IPR000291 D-alanine--D-alanine ligase/VANA/B/C, conserved site KEGG: 00473+6.3.2.4|KEGG: 00550+6.3.2.4|MetaCyc: PWY-6386|MetaCyc: PWY-6387|MetaCyc: PWY-7953 CDA09_18175 1eaaffc0a9409408b7a1d76d4db23827 304 SUPERFAMILY SSF52440 7 99 9.59E-30 T 01-11-2018 IPR016185 Pre-ATP-grasp domain superfamily CDA09_19245 cd3f09cf1bceb40bfb187e22b9d80637 294 Gene3D G3DSA:1.10.1040.10 162 290 5.5E-37 T 01-11-2018 IPR013328 6-phosphogluconate dehydrogenase, domain 2 GO:0016491|GO:0055114 CDA09_19245 cd3f09cf1bceb40bfb187e22b9d80637 294 Gene3D G3DSA:3.40.50.720 1 161 2.6E-55 T 01-11-2018 CDA09_19245 cd3f09cf1bceb40bfb187e22b9d80637 294 Pfam PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase 164 284 7.8E-35 T 01-11-2018 IPR029154 3-hydroxyisobutyrate dehydrogenase, NAD-binding domain GO:0051287 CDA09_19245 cd3f09cf1bceb40bfb187e22b9d80637 294 SUPERFAMILY SSF51735 1 161 9.44E-49 T 01-11-2018 IPR036291 NAD(P)-binding domain superfamily CDA09_19245 cd3f09cf1bceb40bfb187e22b9d80637 294 ProSitePatterns PS00895 3-hydroxyisobutyrate dehydrogenase signature. 5 18 - T 01-11-2018 IPR002204 3-hydroxyisobutyrate dehydrogenase-related, conserved site GO:0016491|GO:0055114 Reactome: R-HSA-70895 CDA09_19245 cd3f09cf1bceb40bfb187e22b9d80637 294 TIGRFAM TIGR01505 tartro_sem_red: 2-hydroxy-3-oxopropionate reductase 3 289 3.2E-106 T 01-11-2018 IPR006398 2-hydroxy-3-oxopropionate reductase GO:0008679|GO:0046487|GO:0055114 KEGG: 00630+1.1.1.60 CDA09_19245 cd3f09cf1bceb40bfb187e22b9d80637 294 Pfam PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase 2 161 2.1E-51 T 01-11-2018 IPR006115 6-phosphogluconate dehydrogenase, NADP-binding GO:0050661 CDA09_19245 cd3f09cf1bceb40bfb187e22b9d80637 294 SUPERFAMILY SSF48179 163 286 2.61E-36 T 01-11-2018 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily GO:0055114 CDA09_19245 cd3f09cf1bceb40bfb187e22b9d80637 294 PIRSF PIRSF000103 1 293 6.5E-80 T 01-11-2018 IPR015815 3-hydroxyisobutyrate dehydrogenase-related GO:0016491|GO:0055114 Reactome: R-HSA-70895 CDA09_07195 2829b3063127997c5e60aada334cee75 152 PRINTS PR00607 Class IE cytochrome C signature 90 100 2.0E-12 T 01-11-2018 IPR002323 Cytochrome c, class IE GO:0005506|GO:0009055|GO:0020037 CDA09_07195 2829b3063127997c5e60aada334cee75 152 PRINTS PR00607 Class IE cytochrome C signature 137 148 2.0E-12 T 01-11-2018 IPR002323 Cytochrome c, class IE GO:0005506|GO:0009055|GO:0020037 CDA09_07195 2829b3063127997c5e60aada334cee75 152 PRINTS PR00607 Class IE cytochrome C signature 79 90 2.0E-12 T 01-11-2018 IPR002323 Cytochrome c, class IE GO:0005506|GO:0009055|GO:0020037 CDA09_07195 2829b3063127997c5e60aada334cee75 152 PRINTS PR00607 Class IE cytochrome C signature 122 134 2.0E-12 T 01-11-2018 IPR002323 Cytochrome c, class IE GO:0005506|GO:0009055|GO:0020037 CDA09_07195 2829b3063127997c5e60aada334cee75 152 SUPERFAMILY SSF46626 69 149 1.06E-16 T 01-11-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 CDA09_07195 2829b3063127997c5e60aada334cee75 152 Gene3D G3DSA:1.10.760.10 65 152 1.2E-32 T 01-11-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 CDA09_07195 2829b3063127997c5e60aada334cee75 152 Pfam PF13442 Cytochrome C oxidase, cbb3-type, subunit III 68 147 5.2E-13 T 01-11-2018 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 Reactome: R-HSA-111457|Reactome: R-HSA-111458|Reactome: R-HSA-111459|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 CDA09_22345 cf3be8df76700a47b282d443969f573f 877 SUPERFAMILY SSF48452 369 560 3.29E-10 T 01-11-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 CDA09_22345 cf3be8df76700a47b282d443969f573f 877 Pfam PF13432 Tetratricopeptide repeat 211 273 3.7E-7 T 01-11-2018 CDA09_22345 cf3be8df76700a47b282d443969f573f 877 Pfam PF13432 Tetratricopeptide repeat 524 562 0.014 T 01-11-2018 CDA09_22345 cf3be8df76700a47b282d443969f573f 877 SUPERFAMILY SSF48452 205 295 4.03E-11 T 01-11-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 CDA09_22345 cf3be8df76700a47b282d443969f573f 877 Gene3D G3DSA:1.25.40.10 159 321 6.2E-11 T 01-11-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 CDA09_22345 cf3be8df76700a47b282d443969f573f 877 Gene3D G3DSA:1.25.40.10 333 590 2.6E-18 T 01-11-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 CDA09_20230 e317abd3d8be6c202c44df42281d0a15 148 Gene3D G3DSA:3.30.530.20 3 147 1.6E-39 T 01-11-2018 IPR023393 START-like domain superfamily CDA09_20230 e317abd3d8be6c202c44df42281d0a15 148 Pfam PF08327 Activator of Hsp90 ATPase homolog 1-like protein 14 143 8.5E-28 T 01-11-2018 IPR013538 Activator of Hsp90 ATPase homologue 1-like CDA09_20230 e317abd3d8be6c202c44df42281d0a15 148 SUPERFAMILY SSF55961 1 144 2.33E-43 T 01-11-2018 CDA09_09450 8a02b201a5df8a764a6bd5db62725003 255 Pfam PF01996 F420-0:Gamma-glutamyl ligase 13 232 3.7E-52 T 01-11-2018 IPR002847 Coenzyme F420:L-glutamate ligase-like domain KEGG: 00680+6.3.2.31+6.3.2.34|MetaCyc: PWY-5199 CDA09_09450 8a02b201a5df8a764a6bd5db62725003 255 TIGRFAM TIGR01916 F420_cofE: coenzyme F420-0:L-glutamate ligase 9 255 5.1E-74 T 01-11-2018 IPR008225 Coenzyme F420:L-glutamate ligase GO:0043773|GO:0046872|GO:0051188 KEGG: 00680+6.3.2.31+6.3.2.34|MetaCyc: PWY-5199 CDA09_09450 8a02b201a5df8a764a6bd5db62725003 255 Gene3D G3DSA:3.90.1660.10 57 255 3.1E-79 T 01-11-2018 CDA09_09450 8a02b201a5df8a764a6bd5db62725003 255 SUPERFAMILY SSF144010 9 255 6.41E-70 T 01-11-2018 CDA09_09450 8a02b201a5df8a764a6bd5db62725003 255 Gene3D G3DSA:3.30.1330.100 9 241 3.1E-79 T 01-11-2018 CDA09_14290 a479cb9489102de86fa6eea963edb458 944 Pfam PF00009 Elongation factor Tu GTP binding domain 449 604 3.2E-33 T 01-11-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 CDA09_14290 a479cb9489102de86fa6eea963edb458 944 Gene3D G3DSA:3.40.50.10050 738 845 9.6E-38 T 01-11-2018 IPR036925 Translation initiation factor IF-2, domain 3 superfamily CDA09_14290 a479cb9489102de86fa6eea963edb458 944 SMART SM00173 449 610 0.0049 T 01-11-2018 CDA09_14290 a479cb9489102de86fa6eea963edb458 944 SUPERFAMILY SSF52156 722 851 4.71E-37 T 01-11-2018 IPR036925 Translation initiation factor IF-2, domain 3 superfamily CDA09_14290 a479cb9489102de86fa6eea963edb458 944 Gene3D G3DSA:2.40.30.10 846 943 3.0E-32 T 01-11-2018 CDA09_14290 a479cb9489102de86fa6eea963edb458 944 TIGRFAM TIGR00487 IF-2: translation initiation factor IF-2 362 944 1.9E-262 T 01-11-2018 IPR000178 Translation initiation factor aIF-2, bacterial-like GO:0003743|GO:0005525|GO:0005622|GO:0006413 Reactome: R-HSA-5368286 CDA09_14290 a479cb9489102de86fa6eea963edb458 944 Pfam PF04760 Translation initiation factor IF-2, N-terminal region 1 51 4.2E-9 T 01-11-2018 IPR006847 Translation initiation factor IF-2, N-terminal CDA09_14290 a479cb9489102de86fa6eea963edb458 944 Pfam PF04760 Translation initiation factor IF-2, N-terminal region 367 418 3.9E-15 T 01-11-2018 IPR006847 Translation initiation factor IF-2, N-terminal CDA09_14290 a479cb9489102de86fa6eea963edb458 944 Pfam PF11987 Translation-initiation factor 2 729 834 5.9E-38 T 01-11-2018 IPR023115 Translation initiation factor IF- 2, domain 3 CDA09_14290 a479cb9489102de86fa6eea963edb458 944 Gene3D G3DSA:2.40.30.10 615 734 1.5E-38 T 01-11-2018 CDA09_14290 a479cb9489102de86fa6eea963edb458 944 SUPERFAMILY SSF52540 441 612 1.4E-50 T 01-11-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CDA09_14290 a479cb9489102de86fa6eea963edb458 944 Gene3D G3DSA:3.40.50.300 441 614 2.1E-69 T 01-11-2018 CDA09_14290 a479cb9489102de86fa6eea963edb458 944 Pfam PF08364 Bacterial translation initiation factor IF-2 associated region 60 98 8.6E-15 T 01-11-2018 IPR013575 Initiation factor 2 associated domain, bacterial CDA09_14290 a479cb9489102de86fa6eea963edb458 944 Hamap MF_00100_B Translation initiation factor IF-2 [infB]. 3 942 17.594 T 01-11-2018 IPR000178 Translation initiation factor aIF-2, bacterial-like GO:0003743|GO:0005525|GO:0005622|GO:0006413 Reactome: R-HSA-5368286 CDA09_14290 a479cb9489102de86fa6eea963edb458 944 SUPERFAMILY SSF50447 617 698 4.37E-25 T 01-11-2018 IPR009000 Translation protein, beta-barrel domain superfamily CDA09_14290 a479cb9489102de86fa6eea963edb458 944 ProSitePatterns PS01176 Initiation factor 2 signature. 895 917 - T 01-11-2018 IPR000178 Translation initiation factor aIF-2, bacterial-like GO:0003743|GO:0005525|GO:0005622|GO:0006413 Reactome: R-HSA-5368286 CDA09_14290 a479cb9489102de86fa6eea963edb458 944 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 448 602 1.7E-31 T 01-11-2018 IPR005225 Small GTP-binding protein domain GO:0005525 CDA09_14290 a479cb9489102de86fa6eea963edb458 944 SUPERFAMILY SSF50447 846 942 2.95E-33 T 01-11-2018 IPR009000 Translation protein, beta-barrel domain superfamily CDA09_14290 a479cb9489102de86fa6eea963edb458 944 SUPERFAMILY SSF46955 3 51 4.21E-10 T 01-11-2018 IPR009061 Putative DNA-binding domain superfamily CDA09_02535 6cce7802cab8fb6862de3ba564576d12 363 Gene3D G3DSA:3.40.50.2000 14 348 2.7E-66 T 01-11-2018 CDA09_02535 6cce7802cab8fb6862de3ba564576d12 363 Pfam PF13439 Glycosyltransferase Family 4 14 159 6.4E-15 T 01-11-2018 IPR028098 Glycosyltransferase subfamily 4-like, N-terminal domain Reactome: R-HSA-446193|Reactome: R-HSA-4549349 CDA09_02535 6cce7802cab8fb6862de3ba564576d12 363 Gene3D G3DSA:3.40.50.2000 158 341 2.7E-66 T 01-11-2018 CDA09_02535 6cce7802cab8fb6862de3ba564576d12 363 Pfam PF00534 Glycosyl transferases group 1 171 336 3.5E-35 T 01-11-2018 IPR001296 Glycosyl transferase, family 1 CDA09_02535 6cce7802cab8fb6862de3ba564576d12 363 SUPERFAMILY SSF53756 9 360 5.23E-81 T 01-11-2018 CDA09_22010 db9a1e17050240b5c9c6898e9e2baf50 807 SUPERFAMILY SSF82866 166 383 1.7E-27 T 01-11-2018 CDA09_22010 db9a1e17050240b5c9c6898e9e2baf50 807 Pfam PF03176 MMPL family 73 377 1.2E-11 T 01-11-2018 IPR004869 Membrane transport protein MMPL domain GO:0016020 CDA09_22010 db9a1e17050240b5c9c6898e9e2baf50 807 Pfam PF03176 MMPL family 550 773 3.7E-21 T 01-11-2018 IPR004869 Membrane transport protein MMPL domain GO:0016020 CDA09_22010 db9a1e17050240b5c9c6898e9e2baf50 807 Gene3D G3DSA:1.20.1640.10 598 778 1.0E-8 T 01-11-2018 CDA09_22010 db9a1e17050240b5c9c6898e9e2baf50 807 SUPERFAMILY SSF82866 554 777 1.57E-27 T 01-11-2018 CDA09_22010 db9a1e17050240b5c9c6898e9e2baf50 807 Gene3D G3DSA:1.20.1640.10 216 392 1.5E-6 T 01-11-2018 CDA09_19270 19776917bf75794ff9bf177686f1a30c 103 SUPERFAMILY SSF141371 6 77 9.42E-6 T 01-11-2018 CDA09_01495 eb3c6ad992894837337a9e5245a02499 609 SUPERFAMILY SSF48452 472 594 2.47E-28 T 01-11-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 CDA09_01495 eb3c6ad992894837337a9e5245a02499 609 Pfam PF13432 Tetratricopeptide repeat 476 537 9.2E-9 T 01-11-2018 CDA09_01495 eb3c6ad992894837337a9e5245a02499 609 Gene3D G3DSA:1.25.40.10 380 605 7.7E-37 T 01-11-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 CDA09_01495 eb3c6ad992894837337a9e5245a02499 609 Pfam PF13181 Tetratricopeptide repeat 538 569 0.064 T 01-11-2018 IPR019734 Tetratricopeptide repeat GO:0005515 CDA09_01495 eb3c6ad992894837337a9e5245a02499 609 SMART SM00028 504 537 2.3E-4 T 01-11-2018 IPR019734 Tetratricopeptide repeat GO:0005515 CDA09_01495 eb3c6ad992894837337a9e5245a02499 609 SMART SM00028 538 571 0.0023 T 01-11-2018 IPR019734 Tetratricopeptide repeat GO:0005515 CDA09_01495 eb3c6ad992894837337a9e5245a02499 609 SMART SM00028 434 467 0.87 T 01-11-2018 IPR019734 Tetratricopeptide repeat GO:0005515 CDA09_01495 eb3c6ad992894837337a9e5245a02499 609 SMART SM00028 470 503 0.071 T 01-11-2018 IPR019734 Tetratricopeptide repeat GO:0005515 CDA09_01495 eb3c6ad992894837337a9e5245a02499 609 SUPERFAMILY SSF48452 385 503 1.14E-12 T 01-11-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 CDA09_12900 81a193687917191ff84357b8a2bb49fa 298 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 78 268 1.6E-22 T 01-11-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 CDA09_12900 81a193687917191ff84357b8a2bb49fa 298 Gene3D G3DSA:1.10.3720.10 17 275 5.0E-65 T 01-11-2018 IPR035906 MetI-like superfamily CDA09_12900 81a193687917191ff84357b8a2bb49fa 298 TIGRFAM TIGR02139 permease_CysT: sulfate ABC transporter, permease protein CysT 11 273 5.6E-126 T 01-11-2018 IPR011865 Sulphate ABC transporter, permease protein CysT GO:0008272|GO:0015116|GO:0016021 CDA09_12900 81a193687917191ff84357b8a2bb49fa 298 SUPERFAMILY SSF161098 16 268 4.86E-52 T 01-11-2018 IPR035906 MetI-like superfamily CDA09_12900 81a193687917191ff84357b8a2bb49fa 298 TIGRFAM TIGR00969 3a0106s02: sulfate ABC transporter, permease protein 11 270 5.0E-97 T 01-11-2018 IPR005667 Sulphate ABC transporter permease protein 2 GO:0008272|GO:0015419|GO:0016020 CDA09_17745 22ad719764a1364a9db79e983a60ab4f 531 TIGRFAM TIGR03098 ligase_PEP_1: acyl-CoA ligase (AMP-forming), exosortase A-associated 6 525 8.5E-239 T 01-11-2018 IPR017529 Acyl-CoA ligase (AMP-forming), exosortase system type 1 associated CDA09_17745 22ad719764a1364a9db79e983a60ab4f 531 Gene3D G3DSA:3.30.300.30 426 531 2.7E-24 T 01-11-2018 CDA09_17745 22ad719764a1364a9db79e983a60ab4f 531 Pfam PF00501 AMP-binding enzyme 13 431 6.0E-93 T 01-11-2018 IPR000873 AMP-dependent synthetase/ligase GO:0003824 CDA09_17745 22ad719764a1364a9db79e983a60ab4f 531 SUPERFAMILY SSF56801 5 528 1.2E-139 T 01-11-2018 CDA09_17745 22ad719764a1364a9db79e983a60ab4f 531 Gene3D G3DSA:3.40.50.12780 1 424 6.9E-102 T 01-11-2018 CDA09_17745 22ad719764a1364a9db79e983a60ab4f 531 Pfam PF13193 AMP-binding enzyme C-terminal domain 440 516 5.4E-11 T 01-11-2018 IPR025110 AMP-binding enzyme, C-terminal domain CDA09_17745 22ad719764a1364a9db79e983a60ab4f 531 ProSitePatterns PS00455 Putative AMP-binding domain signature. 171 182 - T 01-11-2018 IPR020845 AMP-binding, conserved site CDA09_01745 b6eba1e26f48badf453105d4c4579e83 868 Pfam PF01075 Glycosyltransferase family 9 (heptosyltransferase) 514 546 1.2E-4 T 01-11-2018 IPR002201 Glycosyl transferase, family 9 GO:0016757 CDA09_01745 b6eba1e26f48badf453105d4c4579e83 868 Gene3D G3DSA:3.40.50.2000 435 574 5.0E-8 T 01-11-2018 CDA09_01745 b6eba1e26f48badf453105d4c4579e83 868 Gene3D G3DSA:3.40.50.150 656 830 7.0E-31 T 01-11-2018 CDA09_01745 b6eba1e26f48badf453105d4c4579e83 868 SUPERFAMILY SSF48452 16 297 3.48E-26 T 01-11-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 CDA09_01745 b6eba1e26f48badf453105d4c4579e83 868 Pfam PF05050 Methyltransferase FkbM domain 669 823 3.1E-18 T 01-11-2018 IPR006342 Methyltransferase FkbM CDA09_01745 b6eba1e26f48badf453105d4c4579e83 868 Gene3D G3DSA:1.25.40.10 1 82 9.0E-9 T 01-11-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 CDA09_01745 b6eba1e26f48badf453105d4c4579e83 868 Gene3D G3DSA:1.25.40.10 263 370 1.4E-6 T 01-11-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 CDA09_01745 b6eba1e26f48badf453105d4c4579e83 868 SUPERFAMILY SSF53756 337 567 9.1E-20 T 01-11-2018 CDA09_01745 b6eba1e26f48badf453105d4c4579e83 868 Gene3D G3DSA:1.25.40.10 188 262 8.1E-6 T 01-11-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 CDA09_01745 b6eba1e26f48badf453105d4c4579e83 868 Gene3D G3DSA:1.25.40.10 83 179 6.0E-12 T 01-11-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 CDA09_01745 b6eba1e26f48badf453105d4c4579e83 868 TIGRFAM TIGR01444 fkbM_fam: methyltransferase, FkbM family 666 803 1.6E-26 T 01-11-2018 IPR006342 Methyltransferase FkbM CDA09_01745 b6eba1e26f48badf453105d4c4579e83 868 SMART SM00028 112 145 200.0 T 01-11-2018 IPR019734 Tetratricopeptide repeat GO:0005515 CDA09_01745 b6eba1e26f48badf453105d4c4579e83 868 SMART SM00028 78 111 0.32 T 01-11-2018 IPR019734 Tetratricopeptide repeat GO:0005515 CDA09_01745 b6eba1e26f48badf453105d4c4579e83 868 SMART SM00028 253 286 9.7 T 01-11-2018 IPR019734 Tetratricopeptide repeat GO:0005515 CDA09_01745 b6eba1e26f48badf453105d4c4579e83 868 SMART SM00028 219 252 220.0 T 01-11-2018 IPR019734 Tetratricopeptide repeat GO:0005515 CDA09_01745 b6eba1e26f48badf453105d4c4579e83 868 SMART SM00028 44 77 18.0 T 01-11-2018 IPR019734 Tetratricopeptide repeat GO:0005515 CDA09_01745 b6eba1e26f48badf453105d4c4579e83 868 SUPERFAMILY SSF53335 636 829 3.03E-45 T 01-11-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase CDA09_01745 b6eba1e26f48badf453105d4c4579e83 868 Pfam PF13432 Tetratricopeptide repeat 16 76 4.1E-7 T 01-11-2018 CDA09_01745 b6eba1e26f48badf453105d4c4579e83 868 Pfam PF13432 Tetratricopeptide repeat 257 306 2.0E-6 T 01-11-2018 CDA09_01745 b6eba1e26f48badf453105d4c4579e83 868 Pfam PF13432 Tetratricopeptide repeat 190 252 5.3E-5 T 01-11-2018 CDA09_19885 921c6258abf1c0ed6e3665e6651f07bd 385 Gene3D G3DSA:2.30.42.10 281 385 2.5E-29 T 01-11-2018 CDA09_19885 921c6258abf1c0ed6e3665e6651f07bd 385 SUPERFAMILY SSF50494 68 277 1.82E-63 T 01-11-2018 IPR009003 Peptidase S1, PA clan CDA09_19885 921c6258abf1c0ed6e3665e6651f07bd 385 SMART SM00228 281 372 8.9E-9 T 01-11-2018 IPR001478 PDZ domain GO:0005515 CDA09_19885 921c6258abf1c0ed6e3665e6651f07bd 385 Gene3D G3DSA:2.40.10.10 51 162 6.5E-35 T 01-11-2018 CDA09_19885 921c6258abf1c0ed6e3665e6651f07bd 385 Pfam PF13365 Trypsin-like peptidase domain 103 242 4.6E-36 T 01-11-2018 CDA09_19885 921c6258abf1c0ed6e3665e6651f07bd 385 SUPERFAMILY SSF50156 239 373 1.26E-18 T 01-11-2018 IPR036034 PDZ superfamily GO:0005515 CDA09_19885 921c6258abf1c0ed6e3665e6651f07bd 385 Pfam PF13180 PDZ domain 284 381 4.2E-14 T 01-11-2018 IPR001478 PDZ domain GO:0005515 CDA09_19885 921c6258abf1c0ed6e3665e6651f07bd 385 Gene3D G3DSA:2.40.10.10 166 280 1.0E-43 T 01-11-2018 CDA09_19885 921c6258abf1c0ed6e3665e6651f07bd 385 PRINTS PR00834 HtrA/DegQ protease family signature 235 252 4.1E-49 T 01-11-2018 IPR001940 Peptidase S1C GO:0004252|GO:0006508 CDA09_19885 921c6258abf1c0ed6e3665e6651f07bd 385 PRINTS PR00834 HtrA/DegQ protease family signature 112 124 4.1E-49 T 01-11-2018 IPR001940 Peptidase S1C GO:0004252|GO:0006508 CDA09_19885 921c6258abf1c0ed6e3665e6651f07bd 385 PRINTS PR00834 HtrA/DegQ protease family signature 133 153 4.1E-49 T 01-11-2018 IPR001940 Peptidase S1C GO:0004252|GO:0006508 CDA09_19885 921c6258abf1c0ed6e3665e6651f07bd 385 PRINTS PR00834 HtrA/DegQ protease family signature 330 342 4.1E-49 T 01-11-2018 IPR001940 Peptidase S1C GO:0004252|GO:0006508 CDA09_19885 921c6258abf1c0ed6e3665e6651f07bd 385 PRINTS PR00834 HtrA/DegQ protease family signature 175 199 4.1E-49 T 01-11-2018 IPR001940 Peptidase S1C GO:0004252|GO:0006508 CDA09_19885 921c6258abf1c0ed6e3665e6651f07bd 385 PRINTS PR00834 HtrA/DegQ protease family signature 213 230 4.1E-49 T 01-11-2018 IPR001940 Peptidase S1C GO:0004252|GO:0006508 CDA09_05340 9ad6eeef5f1d2fbf07c1614fbd2ab4f5 196 Pfam PF00994 Probable molybdopterin binding domain 9 147 5.0E-29 T 01-11-2018 IPR001453 MoaB/Mog domain CDA09_05340 9ad6eeef5f1d2fbf07c1614fbd2ab4f5 196 Gene3D G3DSA:3.40.980.10 3 196 5.2E-63 T 01-11-2018 IPR036425 MoaB/Mog-like domain superfamily CDA09_05340 9ad6eeef5f1d2fbf07c1614fbd2ab4f5 196 ProSitePatterns PS01078 Molybdenum cofactor biosynthesis proteins signature 1. 70 83 - T 01-11-2018 IPR008284 Molybdenum cofactor biosynthesis, conserved site GO:0006777 Reactome: R-HSA-947581 CDA09_05340 9ad6eeef5f1d2fbf07c1614fbd2ab4f5 196 SUPERFAMILY SSF53218 5 189 1.57E-46 T 01-11-2018 IPR036425 MoaB/Mog-like domain superfamily CDA09_05340 9ad6eeef5f1d2fbf07c1614fbd2ab4f5 196 TIGRFAM TIGR00177 molyb_syn: molybdenum cofactor synthesis domain 5 148 7.7E-39 T 01-11-2018 IPR001453 MoaB/Mog domain CDA09_05340 9ad6eeef5f1d2fbf07c1614fbd2ab4f5 196 SMART SM00852 8 154 1.8E-23 T 01-11-2018 IPR001453 MoaB/Mog domain CDA09_17810 8b4411b423dc242bb0ca1849db805156 525 SUPERFAMILY SSF81442 19 524 3.01E-197 T 01-11-2018 IPR036927 Cytochrome c oxidase-like, subunit I superfamily GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 CDA09_17810 8b4411b423dc242bb0ca1849db805156 525 Gene3D G3DSA:1.20.210.10 11 525 2.6E-220 T 01-11-2018 IPR036927 Cytochrome c oxidase-like, subunit I superfamily GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 CDA09_17810 8b4411b423dc242bb0ca1849db805156 525 TIGRFAM TIGR02891 CtaD_CoxA: cytochrome c oxidase, subunit I 22 524 7.1E-217 T 01-11-2018 IPR014241 Cytochrome c oxidase, subunit I bacterial type GO:0004129|GO:0005886|GO:0015990|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279 CDA09_17810 8b4411b423dc242bb0ca1849db805156 525 ProSitePatterns PS00077 Heme-copper oxidase catalytic subunit, copper B binding region signature. 249 303 - T 01-11-2018 IPR023615 Cytochrome c oxidase, subunit I, copper-binding site GO:0004129|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 CDA09_17810 8b4411b423dc242bb0ca1849db805156 525 PRINTS PR01165 Cytochrome c oxidase subunit I signature 167 185 1.4E-118 T 01-11-2018 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 CDA09_17810 8b4411b423dc242bb0ca1849db805156 525 PRINTS PR01165 Cytochrome c oxidase subunit I signature 138 150 1.4E-118 T 01-11-2018 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 CDA09_17810 8b4411b423dc242bb0ca1849db805156 525 PRINTS PR01165 Cytochrome c oxidase subunit I signature 21 46 1.4E-118 T 01-11-2018 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 CDA09_17810 8b4411b423dc242bb0ca1849db805156 525 PRINTS PR01165 Cytochrome c oxidase subunit I signature 196 215 1.4E-118 T 01-11-2018 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 CDA09_17810 8b4411b423dc242bb0ca1849db805156 525 PRINTS PR01165 Cytochrome c oxidase subunit I signature 352 370 1.4E-118 T 01-11-2018 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 CDA09_17810 8b4411b423dc242bb0ca1849db805156 525 PRINTS PR01165 Cytochrome c oxidase subunit I signature 293 308 1.4E-118 T 01-11-2018 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 CDA09_17810 8b4411b423dc242bb0ca1849db805156 525 PRINTS PR01165 Cytochrome c oxidase subunit I signature 95 119 1.4E-118 T 01-11-2018 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 CDA09_17810 8b4411b423dc242bb0ca1849db805156 525 PRINTS PR01165 Cytochrome c oxidase subunit I signature 68 91 1.4E-118 T 01-11-2018 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 CDA09_17810 8b4411b423dc242bb0ca1849db805156 525 PRINTS PR01165 Cytochrome c oxidase subunit I signature 317 338 1.4E-118 T 01-11-2018 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 CDA09_17810 8b4411b423dc242bb0ca1849db805156 525 PRINTS PR01165 Cytochrome c oxidase subunit I signature 430 451 1.4E-118 T 01-11-2018 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 CDA09_17810 8b4411b423dc242bb0ca1849db805156 525 PRINTS PR01165 Cytochrome c oxidase subunit I signature 380 399 1.4E-118 T 01-11-2018 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 CDA09_17810 8b4411b423dc242bb0ca1849db805156 525 PRINTS PR01165 Cytochrome c oxidase subunit I signature 247 268 1.4E-118 T 01-11-2018 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 CDA09_17810 8b4411b423dc242bb0ca1849db805156 525 Pfam PF00115 Cytochrome C and Quinol oxidase polypeptide I 30 471 2.6E-153 T 01-11-2018 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 CDA09_16110 6e7d0c444dcb035e2870007e6946da54 434 Gene3D G3DSA:3.90.1150.10 294 433 2.1E-50 T 01-11-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 CDA09_16110 6e7d0c444dcb035e2870007e6946da54 434 ProSitePatterns PS00868 Cys/Met metabolism enzymes pyridoxal-phosphate attachment site. 202 216 - T 01-11-2018 IPR000277 Cys/Met metabolism, pyridoxal phosphate-dependent enzyme GO:0030170 Reactome: R-HSA-1614558|Reactome: R-HSA-1614603|Reactome: R-HSA-2408508 CDA09_16110 6e7d0c444dcb035e2870007e6946da54 434 TIGRFAM TIGR01326 OAH_OAS_sulfhy: O-acetylhomoserine aminocarboxypropyltransferase/cysteine synthase 10 425 2.0E-172 T 01-11-2018 IPR006235 O-acetylhomoserine/O-acetylserine sulfhydrylase GO:0006520|GO:0016765 CDA09_16110 6e7d0c444dcb035e2870007e6946da54 434 Gene3D G3DSA:3.40.640.10 9 290 1.2E-94 T 01-11-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 CDA09_16110 6e7d0c444dcb035e2870007e6946da54 434 SUPERFAMILY SSF53383 8 425 4.73E-121 T 01-11-2018 IPR015424 Pyridoxal phosphate-dependent transferase CDA09_16110 6e7d0c444dcb035e2870007e6946da54 434 Pfam PF01053 Cys/Met metabolism PLP-dependent enzyme 10 425 7.7E-132 T 01-11-2018 IPR000277 Cys/Met metabolism, pyridoxal phosphate-dependent enzyme GO:0030170 Reactome: R-HSA-1614558|Reactome: R-HSA-1614603|Reactome: R-HSA-2408508 CDA09_16110 6e7d0c444dcb035e2870007e6946da54 434 PIRSF PIRSF001434 1 429 3.5E-128 T 01-11-2018 IPR000277 Cys/Met metabolism, pyridoxal phosphate-dependent enzyme GO:0030170 Reactome: R-HSA-1614558|Reactome: R-HSA-1614603|Reactome: R-HSA-2408508 CDA09_12580 3976dc67e8e37b25231608d2bf610833 362 Gene3D G3DSA:3.30.70.2130 93 216 2.1E-7 T 01-11-2018 CDA09_12580 3976dc67e8e37b25231608d2bf610833 362 PIRSF PIRSF015283 1 340 9.3E-98 T 01-11-2018 IPR016631 Regulatory, RpfE CDA09_18055 86657c045b8fb9bb1be8e380d8d91b71 444 SMART SM01091 344 426 5.9E-30 T 01-11-2018 IPR005170 Transporter-associated domain CDA09_18055 86657c045b8fb9bb1be8e380d8d91b71 444 Pfam PF01595 Domain of unknown function DUF21 4 196 5.0E-45 T 01-11-2018 IPR002550 CNNM, transmembrane domain CDA09_18055 86657c045b8fb9bb1be8e380d8d91b71 444 Gene3D G3DSA:3.30.465.10 344 426 1.6E-34 T 01-11-2018 IPR016169 FAD-binding, type PCMH, subdomain 2 CDA09_18055 86657c045b8fb9bb1be8e380d8d91b71 444 Pfam PF03471 Transporter associated domain 345 424 4.3E-22 T 01-11-2018 IPR005170 Transporter-associated domain CDA09_18055 86657c045b8fb9bb1be8e380d8d91b71 444 Pfam PF00571 CBS domain 217 265 0.0026 T 01-11-2018 IPR000644 CBS domain CDA09_18055 86657c045b8fb9bb1be8e380d8d91b71 444 Pfam PF00571 CBS domain 282 329 4.5E-6 T 01-11-2018 IPR000644 CBS domain CDA09_18055 86657c045b8fb9bb1be8e380d8d91b71 444 SMART SM00116 282 330 0.53 T 01-11-2018 IPR000644 CBS domain CDA09_18055 86657c045b8fb9bb1be8e380d8d91b71 444 SMART SM00116 220 269 7.7 T 01-11-2018 IPR000644 CBS domain CDA09_18055 86657c045b8fb9bb1be8e380d8d91b71 444 Gene3D G3DSA:3.10.580.10 192 343 6.9E-47 T 01-11-2018 CDA09_18055 86657c045b8fb9bb1be8e380d8d91b71 444 SUPERFAMILY SSF56176 342 432 4.64E-23 T 01-11-2018 IPR036318 FAD-binding, type PCMH-like superfamily GO:0050660 CDA09_18055 86657c045b8fb9bb1be8e380d8d91b71 444 SUPERFAMILY SSF54631 198 333 4.8E-29 T 01-11-2018 CDA09_15540 e294c2ed21c3dc4ac201985ece6664a1 279 TIGRFAM TIGR02177 PorB_KorB: 2-oxoacid:acceptor oxidoreductase, beta subunit, pyruvate/2-ketoisovalerate family 22 213 1.3E-81 T 01-11-2018 IPR011896 2-oxoacid:acceptor oxidoreductase, beta subunit, pyruvate/2-ketoisovalerate CDA09_15540 e294c2ed21c3dc4ac201985ece6664a1 279 Gene3D G3DSA:3.40.50.970 30 258 8.5E-28 T 01-11-2018 CDA09_15540 e294c2ed21c3dc4ac201985ece6664a1 279 SUPERFAMILY SSF52518 19 262 2.32E-71 T 01-11-2018 IPR029061 Thiamin diphosphate-binding fold CDA09_15540 e294c2ed21c3dc4ac201985ece6664a1 279 Pfam PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain 56 204 8.9E-33 T 01-11-2018 IPR011766 Thiamine pyrophosphate enzyme, C-terminal TPP-binding GO:0003824|GO:0030976 CDA09_01135 fe95d4ffeed25c93122287a81437bd5b 626 Pfam PF07690 Major Facilitator Superfamily 17 315 5.2E-10 T 01-11-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 CDA09_01135 fe95d4ffeed25c93122287a81437bd5b 626 SMART SM00563 455 571 1.9E-32 T 01-11-2018 IPR002123 Phospholipid/glycerol acyltransferase GO:0016746 CDA09_01135 fe95d4ffeed25c93122287a81437bd5b 626 SUPERFAMILY SSF103473 10 424 7.85E-27 T 01-11-2018 IPR036259 MFS transporter superfamily CDA09_01135 fe95d4ffeed25c93122287a81437bd5b 626 SUPERFAMILY SSF69593 421 573 1.96E-30 T 01-11-2018 CDA09_01135 fe95d4ffeed25c93122287a81437bd5b 626 Pfam PF01553 Acyltransferase 440 567 1.4E-25 T 01-11-2018 IPR002123 Phospholipid/glycerol acyltransferase GO:0016746 CDA09_01135 fe95d4ffeed25c93122287a81437bd5b 626 Gene3D G3DSA:1.20.1250.20 4 421 1.3E-25 T 01-11-2018 CDA09_00825 73ace17426f45b9a05ec9a38c4e5532a 707 Gene3D G3DSA:1.10.8.60 409 483 2.7E-10 T 01-11-2018 CDA09_00825 73ace17426f45b9a05ec9a38c4e5532a 707 Gene3D G3DSA:3.40.50.300 226 408 5.2E-35 T 01-11-2018 CDA09_00825 73ace17426f45b9a05ec9a38c4e5532a 707 Pfam PF00004 ATPase family associated with various cellular activities (AAA) 275 406 5.5E-22 T 01-11-2018 IPR003959 ATPase, AAA-type, core GO:0005524 CDA09_00825 73ace17426f45b9a05ec9a38c4e5532a 707 SUPERFAMILY SSF52540 236 465 6.65E-43 T 01-11-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CDA09_00825 73ace17426f45b9a05ec9a38c4e5532a 707 Pfam PF01434 Peptidase family M41 471 671 1.9E-18 T 01-11-2018 IPR000642 Peptidase M41 GO:0004222|GO:0005524|GO:0006508 Reactome: R-HSA-8949664 CDA09_00825 73ace17426f45b9a05ec9a38c4e5532a 707 Gene3D G3DSA:1.20.58.760 484 691 1.1E-36 T 01-11-2018 CDA09_00825 73ace17426f45b9a05ec9a38c4e5532a 707 SMART SM00382 271 409 2.1E-13 T 01-11-2018 IPR003593 AAA+ ATPase domain CDA09_00825 73ace17426f45b9a05ec9a38c4e5532a 707 SUPERFAMILY SSF140990 493 683 6.54E-25 T 01-11-2018 IPR037219 Peptidase M41-like GO:0004222|GO:0005524|GO:0006508 Reactome: R-HSA-8949664 CDA09_01050 ebf2a3924f53b4c34fd2f83dc423e088 572 Gene3D G3DSA:3.40.50.300 298 571 3.5E-108 T 01-11-2018 CDA09_01050 ebf2a3924f53b4c34fd2f83dc423e088 572 ProSitePatterns PS00662 Bacterial type II secretion system protein E signature. 389 403 - T 01-11-2018 IPR001482 Type II/IV secretion system protein CDA09_01050 ebf2a3924f53b4c34fd2f83dc423e088 572 SUPERFAMILY SSF160246 20 144 2.09E-7 T 01-11-2018 IPR037257 General secretory system II, protein E, N-terminal superfamily CDA09_01050 ebf2a3924f53b4c34fd2f83dc423e088 572 Pfam PF00437 Type II/IV secretion system protein 191 460 5.2E-75 T 01-11-2018 IPR001482 Type II/IV secretion system protein CDA09_01050 ebf2a3924f53b4c34fd2f83dc423e088 572 Gene3D G3DSA:3.30.450.90 152 289 4.1E-42 T 01-11-2018 CDA09_01050 ebf2a3924f53b4c34fd2f83dc423e088 572 SMART SM00382 322 533 0.0047 T 01-11-2018 IPR003593 AAA+ ATPase domain CDA09_01050 ebf2a3924f53b4c34fd2f83dc423e088 572 SUPERFAMILY SSF52540 178 569 1.27E-94 T 01-11-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CDA09_01050 ebf2a3924f53b4c34fd2f83dc423e088 572 Pfam PF05157 Type II secretion system (T2SS), protein E, N-terminal domain 49 148 5.9E-6 T 01-11-2018 IPR007831 General secretory system II, protein E, N-terminal CDA09_21205 483530c8f404ce1e60564555b55303b8 245 PIRSF PIRSF039137 6 243 1.1E-105 T 01-11-2018 IPR030660 High-affinity branched-chain amino acid transport ATP-binding protein GO:0015658|GO:0015803 CDA09_21205 483530c8f404ce1e60564555b55303b8 245 Gene3D G3DSA:3.40.50.300 6 243 1.4E-64 T 01-11-2018 CDA09_21205 483530c8f404ce1e60564555b55303b8 245 SUPERFAMILY SSF52540 8 241 8.48E-61 T 01-11-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CDA09_21205 483530c8f404ce1e60564555b55303b8 245 Pfam PF00005 ABC transporter 26 170 1.3E-30 T 01-11-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 CDA09_21205 483530c8f404ce1e60564555b55303b8 245 SMART SM00382 34 219 5.8E-9 T 01-11-2018 IPR003593 AAA+ ATPase domain CDA09_21205 483530c8f404ce1e60564555b55303b8 245 ProSitePatterns PS00211 ABC transporters family signature. 143 157 - T 01-11-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 CDA09_19420 559662b6559d908b1e4f1ca77525147c 72 Hamap MF_00075 Translation initiation factor IF-1 [infA]. 1 72 26.878 T 01-11-2018 IPR004368 Translation initiation factor IF-1 GO:0003743|GO:0006413 CDA09_19420 559662b6559d908b1e4f1ca77525147c 72 SUPERFAMILY SSF50249 1 70 3.18E-27 T 01-11-2018 IPR012340 Nucleic acid-binding, OB-fold CDA09_19420 559662b6559d908b1e4f1ca77525147c 72 Pfam PF01176 Translation initiation factor 1A / IF-1 7 70 1.4E-25 T 01-11-2018 IPR006196 RNA-binding domain, S1, IF1 type GO:0003723|GO:0003743|GO:0006413 CDA09_19420 559662b6559d908b1e4f1ca77525147c 72 SMART SM00316 4 72 2.8E-4 T 01-11-2018 IPR022967 RNA-binding domain, S1 CDA09_19420 559662b6559d908b1e4f1ca77525147c 72 Gene3D G3DSA:2.40.50.140 1 72 1.1E-36 T 01-11-2018 CDA09_19420 559662b6559d908b1e4f1ca77525147c 72 TIGRFAM TIGR00008 infA: translation initiation factor IF-1 3 70 4.0E-36 T 01-11-2018 IPR004368 Translation initiation factor IF-1 GO:0003743|GO:0006413 CDA09_20585 b5af81146dd666e866c10b794ca70b10 579 Pfam PF00999 Sodium/hydrogen exchanger family 14 389 5.3E-59 T 01-11-2018 IPR006153 Cation/H+ exchanger GO:0006812|GO:0015299|GO:0016021|GO:0055085 CDA09_20585 b5af81146dd666e866c10b794ca70b10 579 Pfam PF02254 TrkA-N domain 423 536 6.7E-25 T 01-11-2018 IPR003148 Regulator of K+ conductance, N-terminal GO:0006813 CDA09_20585 b5af81146dd666e866c10b794ca70b10 579 SUPERFAMILY SSF51735 421 550 1.25E-29 T 01-11-2018 IPR036291 NAD(P)-binding domain superfamily CDA09_20585 b5af81146dd666e866c10b794ca70b10 579 Gene3D G3DSA:1.20.1530.20 6 397 9.5E-79 T 01-11-2018 IPR038770 Sodium/solute symporter superfamily CDA09_20585 b5af81146dd666e866c10b794ca70b10 579 Gene3D G3DSA:3.40.50.720 420 578 4.3E-37 T 01-11-2018 CDA09_05555 c29e5d578297542c9dafb8a5c894d75d 342 Hamap MF_00150 N-acetyl-gamma-glutamyl-phosphate reductase [argC]. 2 336 42.963 T 01-11-2018 IPR000706 N-acetyl-gamma-glutamyl-phosphate reductase, type 1 GO:0003942|GO:0006526|GO:0055114 KEGG: 00220+1.2.1.38|MetaCyc: PWY-5154|MetaCyc: PWY-7400 CDA09_05555 c29e5d578297542c9dafb8a5c894d75d 342 Pfam PF01118 Semialdehyde dehydrogenase, NAD binding domain 3 140 2.1E-34 T 01-11-2018 IPR000534 Semialdehyde dehydrogenase, NAD-binding GO:0016620|GO:0051287|GO:0055114 CDA09_05555 c29e5d578297542c9dafb8a5c894d75d 342 SUPERFAMILY SSF55347 149 310 6.07E-51 T 01-11-2018 CDA09_05555 c29e5d578297542c9dafb8a5c894d75d 342 Gene3D G3DSA:3.30.360.10 147 310 4.5E-126 T 01-11-2018 CDA09_05555 c29e5d578297542c9dafb8a5c894d75d 342 ProSitePatterns PS01224 N-acetyl-gamma-glutamyl-phosphate reductase active site. 144 160 - T 01-11-2018 IPR023013 N-acetyl-gamma-glutamyl-phosphate reductase, active site GO:0003942|GO:0055114 KEGG: 00220+1.2.1.38|MetaCyc: PWY-5154|MetaCyc: PWY-7400 CDA09_05555 c29e5d578297542c9dafb8a5c894d75d 342 SUPERFAMILY SSF51735 2 175 1.75E-53 T 01-11-2018 IPR036291 NAD(P)-binding domain superfamily CDA09_05555 c29e5d578297542c9dafb8a5c894d75d 342 TIGRFAM TIGR01850 argC: N-acetyl-gamma-glutamyl-phosphate reductase 2 342 7.9E-128 T 01-11-2018 IPR000706 N-acetyl-gamma-glutamyl-phosphate reductase, type 1 GO:0003942|GO:0006526|GO:0055114 KEGG: 00220+1.2.1.38|MetaCyc: PWY-5154|MetaCyc: PWY-7400 CDA09_05555 c29e5d578297542c9dafb8a5c894d75d 342 Gene3D G3DSA:3.40.50.720 3 328 4.5E-126 T 01-11-2018 CDA09_05555 c29e5d578297542c9dafb8a5c894d75d 342 SMART SM00859 3 141 1.4E-58 T 01-11-2018 IPR000534 Semialdehyde dehydrogenase, NAD-binding GO:0016620|GO:0051287|GO:0055114 CDA09_05555 c29e5d578297542c9dafb8a5c894d75d 342 Pfam PF02774 Semialdehyde dehydrogenase, dimerisation domain 160 313 3.0E-19 T 01-11-2018 IPR012280 Semialdehyde dehydrogenase, dimerisation domain GO:0005737|GO:0008652|GO:0016620|GO:0046983 KEGG: 00220+1.2.1.38|MetaCyc: PWY-5154|MetaCyc: PWY-7400 CDA09_10770 02adc0a0a0bcd77332d3da0ab6d28fcc 348 Gene3D G3DSA:3.40.5.100 259 347 1.3E-16 T 01-11-2018 CDA09_10770 02adc0a0a0bcd77332d3da0ab6d28fcc 348 SUPERFAMILY SSF53335 2 318 2.66E-51 T 01-11-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase CDA09_10770 02adc0a0a0bcd77332d3da0ab6d28fcc 348 Gene3D G3DSA:3.40.50.150 31 257 8.9E-66 T 01-11-2018 CDA09_10770 02adc0a0a0bcd77332d3da0ab6d28fcc 348 Pfam PF13847 Methyltransferase domain 61 204 2.0E-32 T 01-11-2018 IPR025714 Methyltransferase domain CDA09_09435 059cbffcaf316dc0cb3916b1cba218ee 259 SMART SM00701 54 203 0.0037 T 01-11-2018 IPR006619 Peptidoglycan recognition protein family domain, metazoa/bacteria GO:0008270|GO:0008745|GO:0009253 Reactome: R-HSA-6803157 CDA09_09435 059cbffcaf316dc0cb3916b1cba218ee 259 SUPERFAMILY SSF55846 55 253 7.07E-26 T 01-11-2018 IPR036505 N-acetylmuramoyl-L-alanine amidase/PGRP domain superfamily GO:0008745|GO:0009253 Reactome: R-HSA-6803157 CDA09_09435 059cbffcaf316dc0cb3916b1cba218ee 259 Pfam PF01510 N-acetylmuramoyl-L-alanine amidase 78 239 1.4E-14 T 01-11-2018 IPR002502 N-acetylmuramoyl-L-alanine amidase domain GO:0008745|GO:0009253 Reactome: R-HSA-6803157 CDA09_16160 843d6168d4185e683e05306504af69d7 195 Gene3D G3DSA:3.90.79.10 12 182 1.4E-54 T 01-11-2018 CDA09_16160 843d6168d4185e683e05306504af69d7 195 SUPERFAMILY SSF55811 18 182 4.87E-48 T 01-11-2018 IPR015797 NUDIX hydrolase-like domain superfamily GO:0016787 CDA09_16160 843d6168d4185e683e05306504af69d7 195 Pfam PF00293 NUDIX domain 51 174 1.7E-17 T 01-11-2018 IPR000086 NUDIX hydrolase domain GO:0016787 CDA09_16160 843d6168d4185e683e05306504af69d7 195 ProSitePatterns PS00893 Nudix box signature. 85 106 - T 01-11-2018 IPR020084 NUDIX hydrolase, conserved site GO:0016787 CDA09_17675 fa58148fffe25a9fd19779870c428c93 573 SUPERFAMILY SSF52540 183 569 1.97E-94 T 01-11-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CDA09_17675 fa58148fffe25a9fd19779870c428c93 573 Pfam PF05157 Type II secretion system (T2SS), protein E, N-terminal domain 45 149 8.3E-18 T 01-11-2018 IPR007831 General secretory system II, protein E, N-terminal CDA09_17675 fa58148fffe25a9fd19779870c428c93 573 Gene3D G3DSA:3.30.450.90 159 296 8.6E-48 T 01-11-2018 CDA09_17675 fa58148fffe25a9fd19779870c428c93 573 Gene3D G3DSA:3.40.50.300 299 573 4.4E-104 T 01-11-2018 CDA09_17675 fa58148fffe25a9fd19779870c428c93 573 SUPERFAMILY SSF160246 7 143 1.29E-29 T 01-11-2018 IPR037257 General secretory system II, protein E, N-terminal superfamily CDA09_17675 fa58148fffe25a9fd19779870c428c93 573 ProSitePatterns PS00662 Bacterial type II secretion system protein E signature. 391 405 - T 01-11-2018 IPR001482 Type II/IV secretion system protein CDA09_17675 fa58148fffe25a9fd19779870c428c93 573 Pfam PF00437 Type II/IV secretion system protein 197 463 1.7E-88 T 01-11-2018 IPR001482 Type II/IV secretion system protein CDA09_17675 fa58148fffe25a9fd19779870c428c93 573 Gene3D G3DSA:3.30.300.160 66 143 1.1E-7 T 01-11-2018 CDA09_17675 fa58148fffe25a9fd19779870c428c93 573 TIGRFAM TIGR02538 type_IV_pilB: type IV-A pilus assembly ATPase PilB 11 572 1.8E-250 T 01-11-2018 IPR013374 ATPase, type IV, pilus assembly, PilB GO:0005524|GO:0008565|GO:0009297 CDA09_16675 729291945ff6d8057afe1b1477026bda 181 Pfam PF14697 4Fe-4S dicluster domain 103 157 1.5E-14 T 01-11-2018 CDA09_16675 729291945ff6d8057afe1b1477026bda 181 PIRSF PIRSF005784 1 180 3.5E-58 T 01-11-2018 IPR016463 Electron transport complex, RnfB/RsxB, Proteobacteria GO:0005886|GO:0022900|GO:0051536 CDA09_16675 729291945ff6d8057afe1b1477026bda 181 Pfam PF04060 Putative Fe-S cluster 41 73 3.5E-11 T 01-11-2018 IPR007202 4Fe-4S domain GO:0051536 CDA09_16675 729291945ff6d8057afe1b1477026bda 181 Hamap MF_00463 Ion-translocating oxidoreductase complex subunit B [rsxB]. 1 162 22.97 T 01-11-2018 IPR010207 Ion-translocating oxidoreductase complex, RnfB/RsxB GO:0009055|GO:0051536 CDA09_16675 729291945ff6d8057afe1b1477026bda 181 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 140 151 - T 01-11-2018 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site CDA09_16675 729291945ff6d8057afe1b1477026bda 181 SUPERFAMILY SSF54862 37 169 4.61E-27 T 01-11-2018 CDA09_16675 729291945ff6d8057afe1b1477026bda 181 Gene3D G3DSA:1.10.15.40 35 80 2.5E-7 T 01-11-2018 CDA09_16675 729291945ff6d8057afe1b1477026bda 181 Gene3D G3DSA:3.30.70.20 81 168 5.7E-18 T 01-11-2018 CDA09_16675 729291945ff6d8057afe1b1477026bda 181 TIGRFAM TIGR01944 rnfB: electron transport complex, RnfABCDGE type, B subunit 4 174 5.5E-57 T 01-11-2018 IPR010207 Ion-translocating oxidoreductase complex, RnfB/RsxB GO:0009055|GO:0051536 CDA09_06795 48fdf676900bb3e38fe75e1e12431602 335 Gene3D G3DSA:3.40.1550.10 44 231 6.0E-55 T 01-11-2018 IPR028976 CheC-like superfamily CDA09_06795 48fdf676900bb3e38fe75e1e12431602 335 PIRSF PIRSF002888 2 328 1.5E-91 T 01-11-2018 IPR001689 Flagellar motor switch protein FliM GO:0003774|GO:0009425|GO:0071973 CDA09_06795 48fdf676900bb3e38fe75e1e12431602 335 SUPERFAMILY SSF101801 249 324 1.83E-11 T 01-11-2018 IPR036429 SpoA-like superfamily CDA09_06795 48fdf676900bb3e38fe75e1e12431602 335 Pfam PF01052 Type III flagellar switch regulator (C-ring) FliN C-term 252 319 3.6E-16 T 01-11-2018 IPR001543 Surface presentation of antigen (SpoA) CDA09_06795 48fdf676900bb3e38fe75e1e12431602 335 Pfam PF02154 Flagellar motor switch protein FliM 38 230 7.9E-68 T 01-11-2018 IPR001689 Flagellar motor switch protein FliM GO:0003774|GO:0009425|GO:0071973 CDA09_06795 48fdf676900bb3e38fe75e1e12431602 335 SUPERFAMILY SSF103039 4 230 8.63E-20 T 01-11-2018 IPR028976 CheC-like superfamily CDA09_06795 48fdf676900bb3e38fe75e1e12431602 335 PRINTS PR00955 Flagellar motor switch protein FliM signature 3 16 6.0E-25 T 01-11-2018 IPR001689 Flagellar motor switch protein FliM GO:0003774|GO:0009425|GO:0071973 CDA09_06795 48fdf676900bb3e38fe75e1e12431602 335 PRINTS PR00955 Flagellar motor switch protein FliM signature 114 133 6.0E-25 T 01-11-2018 IPR001689 Flagellar motor switch protein FliM GO:0003774|GO:0009425|GO:0071973 CDA09_06795 48fdf676900bb3e38fe75e1e12431602 335 PRINTS PR00955 Flagellar motor switch protein FliM signature 212 230 6.0E-25 T 01-11-2018 IPR001689 Flagellar motor switch protein FliM GO:0003774|GO:0009425|GO:0071973 CDA09_06795 48fdf676900bb3e38fe75e1e12431602 335 PRINTS PR00955 Flagellar motor switch protein FliM signature 89 105 6.0E-25 T 01-11-2018 IPR001689 Flagellar motor switch protein FliM GO:0003774|GO:0009425|GO:0071973 CDA09_06795 48fdf676900bb3e38fe75e1e12431602 335 TIGRFAM TIGR01397 fliM_switch: flagellar motor switch protein FliM 4 318 1.6E-103 T 01-11-2018 IPR001689 Flagellar motor switch protein FliM GO:0003774|GO:0009425|GO:0071973 CDA09_00915 561afa4d8c7803be07688afa929d1cc7 232 SUPERFAMILY SSF52172 1 180 2.56E-40 T 01-11-2018 IPR011006 CheY-like superfamily CDA09_00915 561afa4d8c7803be07688afa929d1cc7 232 SMART SM00448 1 112 2.3E-39 T 01-11-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 CDA09_00915 561afa4d8c7803be07688afa929d1cc7 232 Pfam PF00486 Transcriptional regulatory protein, C terminal 147 221 1.3E-22 T 01-11-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 CDA09_00915 561afa4d8c7803be07688afa929d1cc7 232 Gene3D G3DSA:1.10.10.10 123 228 1.6E-29 T 01-11-2018 IPR036388 Winged helix-like DNA-binding domain superfamily CDA09_00915 561afa4d8c7803be07688afa929d1cc7 232 SMART SM00862 145 222 2.9E-21 T 01-11-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 CDA09_00915 561afa4d8c7803be07688afa929d1cc7 232 Gene3D G3DSA:3.40.50.2300 1 121 1.8E-38 T 01-11-2018 CDA09_00915 561afa4d8c7803be07688afa929d1cc7 232 Pfam PF00072 Response regulator receiver domain 3 113 7.0E-27 T 01-11-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 CDA09_18185 8116c853f63942217b958c68cd9af91a 356 Gene3D G3DSA:3.40.50.2000 158 335 5.1E-114 T 01-11-2018 CDA09_18185 8116c853f63942217b958c68cd9af91a 356 TIGRFAM TIGR01133 murG: undecaprenyldiphospho-muramoylpentapeptide beta-N-acetylglucosaminyltransferase 1 346 3.5E-102 T 01-11-2018 IPR006009 N-acetylglucosaminyltransferase, MurG GO:0050511 KEGG: 00550+2.4.1.227|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471 CDA09_18185 8116c853f63942217b958c68cd9af91a 356 Pfam PF04101 Glycosyltransferase family 28 C-terminal domain 181 342 3.6E-35 T 01-11-2018 IPR007235 Glycosyl transferase, family 28, C-terminal GO:0016758 KEGG: 00550+2.4.1.227|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471|Reactome: R-HSA-446193|Reactome: R-HSA-5633231 CDA09_18185 8116c853f63942217b958c68cd9af91a 356 Hamap MF_00033 UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase [murG]. 4 351 36.229 T 01-11-2018 IPR006009 N-acetylglucosaminyltransferase, MurG GO:0050511 KEGG: 00550+2.4.1.227|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471 CDA09_18185 8116c853f63942217b958c68cd9af91a 356 Gene3D G3DSA:3.40.50.2000 5 341 5.1E-114 T 01-11-2018 CDA09_18185 8116c853f63942217b958c68cd9af91a 356 SUPERFAMILY SSF53756 2 351 6.0E-121 T 01-11-2018 CDA09_18185 8116c853f63942217b958c68cd9af91a 356 Pfam PF03033 Glycosyltransferase family 28 N-terminal domain 5 141 9.4E-34 T 01-11-2018 IPR004276 Glycosyltransferase family 28, N-terminal domain GO:0005975|GO:0016758|GO:0030259 KEGG: 00550+2.4.1.227|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471 CDA09_09930 8d2208ad66a64fa5d9a07dc65bf33320 387 SUPERFAMILY SSF46894 311 380 4.76E-12 T 01-11-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 CDA09_09930 8d2208ad66a64fa5d9a07dc65bf33320 387 SMART SM00421 322 379 8.8E-10 T 01-11-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 CDA09_09930 8d2208ad66a64fa5d9a07dc65bf33320 387 Gene3D G3DSA:3.30.450.20 177 316 5.1E-5 T 01-11-2018 CDA09_09930 8d2208ad66a64fa5d9a07dc65bf33320 387 Gene3D G3DSA:1.10.10.10 317 380 7.9E-10 T 01-11-2018 IPR036388 Winged helix-like DNA-binding domain superfamily CDA09_09930 8d2208ad66a64fa5d9a07dc65bf33320 387 Pfam PF00196 Bacterial regulatory proteins, luxR family 325 378 3.4E-5 T 01-11-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 CDA09_07925 dde90b392526a2d917f22a8fb198ac50 313 SUPERFAMILY SSF52768 4 305 3.6E-90 T 01-11-2018 IPR023696 Ureohydrolase domain superfamily CDA09_07925 dde90b392526a2d917f22a8fb198ac50 313 PIRSF PIRSF036979 1 301 1.0E-31 T 01-11-2018 IPR006035 Ureohydrolase GO:0046872 CDA09_07925 dde90b392526a2d917f22a8fb198ac50 313 PRINTS PR00116 Arginase signature 224 253 5.2E-43 T 01-11-2018 IPR006035 Ureohydrolase GO:0046872 CDA09_07925 dde90b392526a2d917f22a8fb198ac50 313 PRINTS PR00116 Arginase signature 95 110 5.2E-43 T 01-11-2018 IPR006035 Ureohydrolase GO:0046872 CDA09_07925 dde90b392526a2d917f22a8fb198ac50 313 PRINTS PR00116 Arginase signature 122 149 5.2E-43 T 01-11-2018 IPR006035 Ureohydrolase GO:0046872 CDA09_07925 dde90b392526a2d917f22a8fb198ac50 313 PRINTS PR00116 Arginase signature 176 194 5.2E-43 T 01-11-2018 IPR006035 Ureohydrolase GO:0046872 CDA09_07925 dde90b392526a2d917f22a8fb198ac50 313 PRINTS PR00116 Arginase signature 259 273 5.2E-43 T 01-11-2018 IPR006035 Ureohydrolase GO:0046872 CDA09_07925 dde90b392526a2d917f22a8fb198ac50 313 Pfam PF00491 Arginase family 6 297 1.4E-78 T 01-11-2018 IPR006035 Ureohydrolase GO:0046872 CDA09_07925 dde90b392526a2d917f22a8fb198ac50 313 Gene3D G3DSA:3.40.800.10 4 302 2.0E-96 T 01-11-2018 CDA09_07925 dde90b392526a2d917f22a8fb198ac50 313 ProSitePatterns PS01053 Arginase family signature. 227 248 - T 01-11-2018 IPR020855 Ureohydrolase, manganese-binding site GO:0016813|GO:0046872 CDA09_07925 dde90b392526a2d917f22a8fb198ac50 313 TIGRFAM TIGR01229 rocF_arginase: arginase 7 301 6.5E-89 T 01-11-2018 IPR014033 Arginase GO:0004053|GO:0006525|GO:0046872 KEGG: 00220+3.5.3.1|KEGG: 00330+3.5.3.1|MetaCyc: PWY-31|MetaCyc: PWY-4984|MetaCyc: PWY-6305|MetaCyc: PWY-6922|Reactome: R-HSA-70635 CDA09_08575 d918bc225ee19570d97bd296795c2440 362 SUPERFAMILY SSF50331 241 358 5.1E-11 T 01-11-2018 IPR008995 Molybdate/tungstate binding, C-terminal CDA09_08575 d918bc225ee19570d97bd296795c2440 362 Gene3D G3DSA:2.40.50.140 287 350 1.8E-9 T 01-11-2018 CDA09_08575 d918bc225ee19570d97bd296795c2440 362 SUPERFAMILY SSF52540 5 243 1.23E-80 T 01-11-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CDA09_08575 d918bc225ee19570d97bd296795c2440 362 ProSitePatterns PS00211 ABC transporters family signature. 136 150 - T 01-11-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 CDA09_08575 d918bc225ee19570d97bd296795c2440 362 Gene3D G3DSA:2.40.50.940 224 358 1.8E-9 T 01-11-2018 CDA09_08575 d918bc225ee19570d97bd296795c2440 362 SMART SM00382 30 213 7.6E-17 T 01-11-2018 IPR003593 AAA+ ATPase domain CDA09_08575 d918bc225ee19570d97bd296795c2440 362 Pfam PF00005 ABC transporter 23 163 4.7E-33 T 01-11-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 CDA09_08575 d918bc225ee19570d97bd296795c2440 362 Gene3D G3DSA:3.40.50.300 5 223 6.9E-64 T 01-11-2018 CDA09_09515 846b6043e3441a7cc064d38d105456b6 362 SUPERFAMILY SSF47203 209 359 1.05E-36 T 01-11-2018 IPR036250 Acyl-CoA dehydrogenase-like, C-terminal GO:0016627|GO:0055114 CDA09_09515 846b6043e3441a7cc064d38d105456b6 362 Gene3D G3DSA:1.10.540.10 1 120 3.8E-34 T 01-11-2018 IPR037069 Acyl-CoA dehydrogenase/oxidase, N-terminal domain superfamily GO:0016627|GO:0050660|GO:0055114 CDA09_09515 846b6043e3441a7cc064d38d105456b6 362 SUPERFAMILY SSF56645 2 200 4.32E-31 T 01-11-2018 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain superfamily GO:0016627|GO:0055114 CDA09_09515 846b6043e3441a7cc064d38d105456b6 362 Pfam PF02771 Acyl-CoA dehydrogenase, N-terminal domain 6 118 1.1E-23 T 01-11-2018 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal GO:0016627|GO:0050660|GO:0055114 CDA09_09515 846b6043e3441a7cc064d38d105456b6 362 Gene3D G3DSA:2.40.110.10 122 217 2.2E-5 T 01-11-2018 CDA09_09515 846b6043e3441a7cc064d38d105456b6 362 Pfam PF00441 Acyl-CoA dehydrogenase, C-terminal domain 209 354 1.0E-24 T 01-11-2018 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal GO:0016627|GO:0055114 CDA09_09515 846b6043e3441a7cc064d38d105456b6 362 Gene3D G3DSA:1.20.140.10 219 362 7.1E-33 T 01-11-2018 CDA09_02740 90c897a2d4332a0b99c6c963fc0aa0db 376 Pfam PF01734 Patatin-like phospholipase 8 220 3.2E-19 T 01-11-2018 IPR002641 Patatin-like phospholipase domain GO:0006629 CDA09_02740 90c897a2d4332a0b99c6c963fc0aa0db 376 SUPERFAMILY SSF52151 1 264 2.62E-44 T 01-11-2018 IPR016035 Acyl transferase/acyl hydrolase/lysophospholipase CDA09_02740 90c897a2d4332a0b99c6c963fc0aa0db 376 Gene3D G3DSA:3.40.1090.10 1 106 2.5E-17 T 01-11-2018 CDA09_19450 28f300d08465953b70af544b1bdae1c4 177 Pfam PF00347 Ribosomal protein L6 11 82 7.0E-14 T 01-11-2018 IPR020040 Ribosomal protein L6, alpha-beta domain GO:0003735|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 CDA09_19450 28f300d08465953b70af544b1bdae1c4 177 Pfam PF00347 Ribosomal protein L6 90 164 6.0E-21 T 01-11-2018 IPR020040 Ribosomal protein L6, alpha-beta domain GO:0003735|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 CDA09_19450 28f300d08465953b70af544b1bdae1c4 177 Hamap MF_01365_B 50S ribosomal protein L6 [rplF]. 1 176 36.719 T 01-11-2018 IPR019906 Ribosomal protein L6, bacterial-type GO:0003735|GO:0005840|GO:0006412|GO:0019843 CDA09_19450 28f300d08465953b70af544b1bdae1c4 177 ProSitePatterns PS00525 Ribosomal protein L6 signature 1. 154 162 - T 01-11-2018 IPR002358 Ribosomal protein L6, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 CDA09_19450 28f300d08465953b70af544b1bdae1c4 177 Gene3D G3DSA:3.90.930.12 83 177 9.8E-40 T 01-11-2018 IPR036789 Ribosomal protein L6, alpha-beta domain superfamily GO:0003735|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 CDA09_19450 28f300d08465953b70af544b1bdae1c4 177 Gene3D G3DSA:3.90.930.12 1 82 1.2E-24 T 01-11-2018 IPR036789 Ribosomal protein L6, alpha-beta domain superfamily GO:0003735|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 CDA09_19450 28f300d08465953b70af544b1bdae1c4 177 PIRSF PIRSF002162 1 177 3.7E-45 T 01-11-2018 IPR000702 Ribosomal protein L6 GO:0003735|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 CDA09_19450 28f300d08465953b70af544b1bdae1c4 177 TIGRFAM TIGR03654 L6_bact: ribosomal protein uL6 2 176 1.5E-71 T 01-11-2018 IPR019906 Ribosomal protein L6, bacterial-type GO:0003735|GO:0005840|GO:0006412|GO:0019843 CDA09_19450 28f300d08465953b70af544b1bdae1c4 177 PRINTS PR00059 Ribosomal protein L6 signature 99 115 1.4E-33 T 01-11-2018 IPR019906 Ribosomal protein L6, bacterial-type GO:0003735|GO:0005840|GO:0006412|GO:0019843 CDA09_19450 28f300d08465953b70af544b1bdae1c4 177 PRINTS PR00059 Ribosomal protein L6 signature 71 96 1.4E-33 T 01-11-2018 IPR019906 Ribosomal protein L6, bacterial-type GO:0003735|GO:0005840|GO:0006412|GO:0019843 CDA09_19450 28f300d08465953b70af544b1bdae1c4 177 PRINTS PR00059 Ribosomal protein L6 signature 141 162 1.4E-33 T 01-11-2018 IPR019906 Ribosomal protein L6, bacterial-type GO:0003735|GO:0005840|GO:0006412|GO:0019843 CDA09_19450 28f300d08465953b70af544b1bdae1c4 177 SUPERFAMILY SSF56053 83 177 1.8E-36 T 01-11-2018 IPR036789 Ribosomal protein L6, alpha-beta domain superfamily GO:0003735|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 CDA09_19450 28f300d08465953b70af544b1bdae1c4 177 SUPERFAMILY SSF56053 1 82 1.87E-22 T 01-11-2018 IPR036789 Ribosomal protein L6, alpha-beta domain superfamily GO:0003735|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 CDA09_21220 b91dde081577e08e74510f7a59a75ea4 499 SUPERFAMILY SSF52540 190 494 1.61E-46 T 01-11-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CDA09_21220 b91dde081577e08e74510f7a59a75ea4 499 Gene3D G3DSA:3.40.50.300 191 496 2.2E-54 T 01-11-2018 CDA09_21220 b91dde081577e08e74510f7a59a75ea4 499 SUPERFAMILY SSF54211 12 169 3.79E-29 T 01-11-2018 IPR020568 Ribosomal protein S5 domain 2-type fold CDA09_21220 b91dde081577e08e74510f7a59a75ea4 499 SMART SM00382 210 391 1.5E-7 T 01-11-2018 IPR003593 AAA+ ATPase domain CDA09_21220 b91dde081577e08e74510f7a59a75ea4 499 Pfam PF01078 Magnesium chelatase, subunit ChlI 190 393 1.4E-96 T 01-11-2018 IPR000523 Magnesium chelatase ChlI domain CDA09_21220 b91dde081577e08e74510f7a59a75ea4 499 Pfam PF13335 Magnesium chelatase, subunit ChlI C-terminal 401 493 4.7E-33 T 01-11-2018 IPR025158 Mg chelatase-related protein, C-terminal domain CDA09_21220 b91dde081577e08e74510f7a59a75ea4 499 TIGRFAM TIGR00368 TIGR00368: Mg chelatase-like protein 7 493 1.6E-187 T 01-11-2018 IPR004482 Mg chelatase-related protein CDA09_21220 b91dde081577e08e74510f7a59a75ea4 499 Pfam PF13541 Subunit ChlI of Mg-chelatase 21 142 2.5E-45 T 01-11-2018 CDA09_21220 b91dde081577e08e74510f7a59a75ea4 499 PRINTS PR01657 Mini-chromosome maintenance (MCM) protein family signature 316 329 6.5E-5 T 01-11-2018 IPR001208 MCM domain GO:0003677|GO:0005524|GO:0006270 CDA09_21220 b91dde081577e08e74510f7a59a75ea4 499 PRINTS PR01657 Mini-chromosome maintenance (MCM) protein family signature 288 302 6.5E-5 T 01-11-2018 IPR001208 MCM domain GO:0003677|GO:0005524|GO:0006270 CDA09_21220 b91dde081577e08e74510f7a59a75ea4 499 PRINTS PR01657 Mini-chromosome maintenance (MCM) protein family signature 209 224 6.5E-5 T 01-11-2018 IPR001208 MCM domain GO:0003677|GO:0005524|GO:0006270 CDA09_14510 945359623f952d233fb01cb0b197c6f7 778 Pfam PF16921 Tex protein YqgF-like domain 325 450 4.9E-50 T 01-11-2018 IPR032639 Tex protein, YqgF-like domain CDA09_14510 945359623f952d233fb01cb0b197c6f7 778 SMART SM00732 324 423 3.1E-34 T 01-11-2018 IPR006641 YqgF/RNase H-like domain GO:0006139 CDA09_14510 945359623f952d233fb01cb0b197c6f7 778 Gene3D G3DSA:1.10.10.650 3 109 1.4E-40 T 01-11-2018 IPR023319 Tex-like protein, HTH domain superfamily CDA09_14510 945359623f952d233fb01cb0b197c6f7 778 SUPERFAMILY SSF158832 3 319 1.57E-118 T 01-11-2018 CDA09_14510 945359623f952d233fb01cb0b197c6f7 778 Pfam PF09371 Tex-like protein N-terminal domain 9 192 1.4E-67 T 01-11-2018 IPR018974 Tex-like protein, N-terminal CDA09_14510 945359623f952d233fb01cb0b197c6f7 778 Gene3D G3DSA:1.10.3500.10 112 497 4.6E-153 T 01-11-2018 IPR023323 Tex-like domain superfamily CDA09_14510 945359623f952d233fb01cb0b197c6f7 778 Pfam PF00575 S1 RNA binding domain 648 719 3.1E-20 T 01-11-2018 IPR003029 S1 domain GO:0003676 CDA09_14510 945359623f952d233fb01cb0b197c6f7 778 Pfam PF12836 Helix-hairpin-helix motif 490 554 3.2E-28 T 01-11-2018 CDA09_14510 945359623f952d233fb01cb0b197c6f7 778 SMART SM00316 648 719 6.2E-24 T 01-11-2018 IPR022967 RNA-binding domain, S1 CDA09_14510 945359623f952d233fb01cb0b197c6f7 778 Gene3D G3DSA:2.40.50.140 630 724 2.6E-28 T 01-11-2018 CDA09_14510 945359623f952d233fb01cb0b197c6f7 778 Gene3D G3DSA:3.30.420.140 323 450 4.6E-153 T 01-11-2018 IPR037027 YqgF/RNase H-like domain superfamily GO:0006139 CDA09_14510 945359623f952d233fb01cb0b197c6f7 778 SUPERFAMILY SSF53098 320 468 1.14E-49 T 01-11-2018 IPR012337 Ribonuclease H-like superfamily CDA09_14510 945359623f952d233fb01cb0b197c6f7 778 SUPERFAMILY SSF47781 469 557 2.11E-28 T 01-11-2018 IPR010994 RuvA domain 2-like CDA09_14510 945359623f952d233fb01cb0b197c6f7 778 Gene3D G3DSA:1.10.150.310 498 629 1.8E-50 T 01-11-2018 CDA09_14510 945359623f952d233fb01cb0b197c6f7 778 SUPERFAMILY SSF47781 559 631 2.02E-20 T 01-11-2018 IPR010994 RuvA domain 2-like CDA09_14510 945359623f952d233fb01cb0b197c6f7 778 SUPERFAMILY SSF50249 636 722 4.92E-25 T 01-11-2018 IPR012340 Nucleic acid-binding, OB-fold CDA09_17560 312e4313d2bc9a083e3a5fa51a4d1cbd 644 Pfam PF02224 Cytidylate kinase 434 642 1.5E-66 T 01-11-2018 IPR011994 Cytidylate kinase domain GO:0004127|GO:0005524|GO:0006139 KEGG: 00240+2.7.4.25|MetaCyc: PWY-7205 CDA09_17560 312e4313d2bc9a083e3a5fa51a4d1cbd 644 Pfam PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) 14 423 1.3E-130 T 01-11-2018 IPR001986 Enolpyruvate transferase domain GO:0016765 CDA09_17560 312e4313d2bc9a083e3a5fa51a4d1cbd 644 Hamap MF_00238 Cytidylate kinase [cmk]. 432 644 30.923 T 01-11-2018 IPR003136 Cytidylate kinase GO:0004127|GO:0005524|GO:0006139 KEGG: 00240+2.7.4.25|MetaCyc: PWY-7205 CDA09_17560 312e4313d2bc9a083e3a5fa51a4d1cbd 644 ProSitePatterns PS00104 EPSP synthase signature 1. 89 103 - T 01-11-2018 IPR023193 3-phosphoshikimate 1-carboxyvinyltransferase, conserved site KEGG: 00400+2.5.1.19|MetaCyc: PWY-6163 CDA09_17560 312e4313d2bc9a083e3a5fa51a4d1cbd 644 ProSitePatterns PS00885 EPSP synthase signature 2. 342 360 - T 01-11-2018 IPR023193 3-phosphoshikimate 1-carboxyvinyltransferase, conserved site KEGG: 00400+2.5.1.19|MetaCyc: PWY-6163 CDA09_17560 312e4313d2bc9a083e3a5fa51a4d1cbd 644 Gene3D G3DSA:3.65.10.10 20 224 2.2E-68 T 01-11-2018 IPR036968 Enolpyruvate transferase domain superfamily GO:0016765 CDA09_17560 312e4313d2bc9a083e3a5fa51a4d1cbd 644 Gene3D G3DSA:3.65.10.10 231 428 4.6E-69 T 01-11-2018 IPR036968 Enolpyruvate transferase domain superfamily GO:0016765 CDA09_17560 312e4313d2bc9a083e3a5fa51a4d1cbd 644 TIGRFAM TIGR01356 aroA: 3-phosphoshikimate 1-carboxyvinyltransferase 14 427 1.9E-135 T 01-11-2018 IPR006264 3-phosphoshikimate 1-carboxyvinyltransferase GO:0003866|GO:0009073 KEGG: 00400+2.5.1.19|MetaCyc: PWY-6163 CDA09_17560 312e4313d2bc9a083e3a5fa51a4d1cbd 644 Gene3D G3DSA:3.40.50.300 429 644 1.9E-72 T 01-11-2018 CDA09_17560 312e4313d2bc9a083e3a5fa51a4d1cbd 644 Hamap MF_00210 3-phosphoshikimate 1-carboxyvinyltransferase [aroA]. 10 430 33.365 T 01-11-2018 IPR006264 3-phosphoshikimate 1-carboxyvinyltransferase GO:0003866|GO:0009073 KEGG: 00400+2.5.1.19|MetaCyc: PWY-6163 CDA09_17560 312e4313d2bc9a083e3a5fa51a4d1cbd 644 SUPERFAMILY SSF55205 1 426 8.5E-128 T 01-11-2018 IPR013792 RNA 3'-terminal phosphate cyclase/enolpyruvate transferase, alpha/beta GO:0003824 CDA09_17560 312e4313d2bc9a083e3a5fa51a4d1cbd 644 SUPERFAMILY SSF52540 432 643 1.75E-38 T 01-11-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CDA09_17560 312e4313d2bc9a083e3a5fa51a4d1cbd 644 TIGRFAM TIGR00017 cmk: cytidylate kinase 432 640 5.2E-65 T 01-11-2018 IPR003136 Cytidylate kinase GO:0004127|GO:0005524|GO:0006139 KEGG: 00240+2.7.4.25|MetaCyc: PWY-7205 CDA09_12725 5571608c3e4f44245cb4b52f2cabf434 486 SMART SM00304 208 260 2.2E-10 T 01-11-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 CDA09_12725 5571608c3e4f44245cb4b52f2cabf434 486 Gene3D G3DSA:3.30.565.10 322 475 9.1E-32 T 01-11-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily CDA09_12725 5571608c3e4f44245cb4b52f2cabf434 486 SUPERFAMILY SSF47384 245 318 1.9E-10 T 01-11-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 CDA09_12725 5571608c3e4f44245cb4b52f2cabf434 486 Pfam PF00672 HAMP domain 210 255 1.3E-8 T 01-11-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 CDA09_12725 5571608c3e4f44245cb4b52f2cabf434 486 Pfam PF16524 Periplasmic domain of Sensor histidine kinase RisS 71 180 5.5E-36 T 01-11-2018 IPR032408 Sensor histidine kinase RisS, periplasmic domain CDA09_12725 5571608c3e4f44245cb4b52f2cabf434 486 SUPERFAMILY SSF55874 311 467 7.33E-35 T 01-11-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily CDA09_12725 5571608c3e4f44245cb4b52f2cabf434 486 Gene3D G3DSA:3.30.450.300 56 184 8.0E-43 T 01-11-2018 IPR038421 Sensor histidine kinase RisS, periplasmic domain superfamily CDA09_12725 5571608c3e4f44245cb4b52f2cabf434 486 SMART SM00388 261 320 9.3E-9 T 01-11-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 CDA09_12725 5571608c3e4f44245cb4b52f2cabf434 486 Pfam PF00512 His Kinase A (phospho-acceptor) domain 265 318 8.7E-8 T 01-11-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 CDA09_12725 5571608c3e4f44245cb4b52f2cabf434 486 PRINTS PR00344 Bacterial sensor protein C-terminal signature 453 466 3.6E-11 T 01-11-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 CDA09_12725 5571608c3e4f44245cb4b52f2cabf434 486 PRINTS PR00344 Bacterial sensor protein C-terminal signature 395 409 3.6E-11 T 01-11-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 CDA09_12725 5571608c3e4f44245cb4b52f2cabf434 486 PRINTS PR00344 Bacterial sensor protein C-terminal signature 429 447 3.6E-11 T 01-11-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 CDA09_12725 5571608c3e4f44245cb4b52f2cabf434 486 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 362 466 7.3E-21 T 01-11-2018 IPR003594 Histidine kinase/HSP90-like ATPase CDA09_12725 5571608c3e4f44245cb4b52f2cabf434 486 SMART SM00387 358 469 7.2E-29 T 01-11-2018 IPR003594 Histidine kinase/HSP90-like ATPase CDA09_12725 5571608c3e4f44245cb4b52f2cabf434 486 Gene3D G3DSA:1.10.287.130 212 321 9.2E-19 T 01-11-2018 CDA09_18970 16c569ab67b50872593578e18f32eae7 657 SUPERFAMILY SSF52540 19 242 4.64E-68 T 01-11-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CDA09_18970 16c569ab67b50872593578e18f32eae7 657 Gene3D G3DSA:3.40.50.300 18 261 2.3E-68 T 01-11-2018 CDA09_18970 16c569ab67b50872593578e18f32eae7 657 Pfam PF12704 MacB-like periplasmic core domain 284 501 6.0E-35 T 01-11-2018 IPR025857 MacB-like periplasmic core domain CDA09_18970 16c569ab67b50872593578e18f32eae7 657 Pfam PF00005 ABC transporter 39 187 6.6E-29 T 01-11-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 CDA09_18970 16c569ab67b50872593578e18f32eae7 657 Pfam PF02687 FtsX-like permease family 564 650 2.5E-11 T 01-11-2018 IPR003838 ABC transporter permease protein domain GO:0016020 CDA09_18970 16c569ab67b50872593578e18f32eae7 657 SMART SM00382 48 235 1.5E-14 T 01-11-2018 IPR003593 AAA+ ATPase domain CDA09_18970 16c569ab67b50872593578e18f32eae7 657 ProSitePatterns PS00211 ABC transporters family signature. 160 174 - T 01-11-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 CDA09_03535 def507cdf2e88095afb757e1d03bb082 725 TIGRFAM TIGR01345 malate_syn_G: malate synthase G 4 724 0.0 T 01-11-2018 IPR006253 Malate synthase G GO:0004474|GO:0006097 KEGG: 00620+2.3.3.9|KEGG: 00630+2.3.3.9|MetaCyc: PWY-6969|MetaCyc: PWY-7118|MetaCyc: PWY-7294|MetaCyc: PWY-7295|MetaCyc: PWY-7854 CDA09_03535 def507cdf2e88095afb757e1d03bb082 725 SUPERFAMILY SSF51645 3 723 1.18E-304 T 01-11-2018 IPR011076 Malate synthase-like superfamily GO:0003824 KEGG: 00620+2.3.3.9|KEGG: 00630+2.3.3.9|MetaCyc: PWY-6969|MetaCyc: PWY-7118|MetaCyc: PWY-7294|MetaCyc: PWY-7295|MetaCyc: PWY-7854 CDA09_03535 def507cdf2e88095afb757e1d03bb082 725 Gene3D G3DSA:1.20.1220.12 585 725 4.3E-74 T 01-11-2018 CDA09_03535 def507cdf2e88095afb757e1d03bb082 725 Gene3D G3DSA:3.20.20.360 10 584 2.8E-273 T 01-11-2018 CDA09_03535 def507cdf2e88095afb757e1d03bb082 725 Gene3D G3DSA:2.170.170.11 135 264 2.8E-273 T 01-11-2018 IPR023310 Malate synthase G, beta sub-domain GO:0004474 KEGG: 00620+2.3.3.9|KEGG: 00630+2.3.3.9|MetaCyc: PWY-6969|MetaCyc: PWY-7118|MetaCyc: PWY-7294|MetaCyc: PWY-7295|MetaCyc: PWY-7854 CDA09_03535 def507cdf2e88095afb757e1d03bb082 725 Pfam PF01274 Malate synthase 18 699 2.0E-174 T 01-11-2018 IPR001465 Malate synthase GO:0004474|GO:0006097 KEGG: 00620+2.3.3.9|KEGG: 00630+2.3.3.9|MetaCyc: PWY-6969|MetaCyc: PWY-7118|MetaCyc: PWY-7294|MetaCyc: PWY-7295|MetaCyc: PWY-7854 CDA09_03535 def507cdf2e88095afb757e1d03bb082 725 Hamap MF_00641 Malate synthase G [glcB]. 1 725 402.528 T 01-11-2018 IPR006253 Malate synthase G GO:0004474|GO:0006097 KEGG: 00620+2.3.3.9|KEGG: 00630+2.3.3.9|MetaCyc: PWY-6969|MetaCyc: PWY-7118|MetaCyc: PWY-7294|MetaCyc: PWY-7295|MetaCyc: PWY-7854 CDA09_02825 66a94c45c694a3e74841ead4fbcf1f63 90 Pfam PF01084 Ribosomal protein S18 32 83 1.1E-24 T 01-11-2018 IPR001648 Ribosomal protein S18 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 CDA09_02825 66a94c45c694a3e74841ead4fbcf1f63 90 PRINTS PR00974 Ribosomal protein S18 family signature 43 53 4.5E-16 T 01-11-2018 IPR001648 Ribosomal protein S18 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 CDA09_02825 66a94c45c694a3e74841ead4fbcf1f63 90 PRINTS PR00974 Ribosomal protein S18 family signature 75 85 4.5E-16 T 01-11-2018 IPR001648 Ribosomal protein S18 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 CDA09_02825 66a94c45c694a3e74841ead4fbcf1f63 90 PRINTS PR00974 Ribosomal protein S18 family signature 61 75 4.5E-16 T 01-11-2018 IPR001648 Ribosomal protein S18 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 CDA09_02825 66a94c45c694a3e74841ead4fbcf1f63 90 PRINTS PR00974 Ribosomal protein S18 family signature 53 60 4.5E-16 T 01-11-2018 IPR001648 Ribosomal protein S18 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 CDA09_02825 66a94c45c694a3e74841ead4fbcf1f63 90 Gene3D G3DSA:4.10.640.10 4 90 4.0E-27 T 01-11-2018 IPR036870 Ribosomal protein S18 superfamily Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 CDA09_02825 66a94c45c694a3e74841ead4fbcf1f63 90 SUPERFAMILY SSF46911 14 86 2.22E-27 T 01-11-2018 IPR036870 Ribosomal protein S18 superfamily Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 CDA09_02825 66a94c45c694a3e74841ead4fbcf1f63 90 Hamap MF_00270 30S ribosomal protein S18 [rpsR]. 17 88 20.567 T 01-11-2018 IPR001648 Ribosomal protein S18 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 CDA09_02825 66a94c45c694a3e74841ead4fbcf1f63 90 TIGRFAM TIGR00165 S18: ribosomal protein bS18 20 87 2.4E-34 T 01-11-2018 IPR001648 Ribosomal protein S18 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 CDA09_02825 66a94c45c694a3e74841ead4fbcf1f63 90 ProDom PD002239 RIBOSOMAL S18 RIBONUCLEOPROTEIN 30S RRNA-BINDING RNA-BINDING CHLOROPLAST PLASTID MITOCHONDRIAL ACETYLATION 36 85 9.0E-22 T 01-11-2018 IPR001648 Ribosomal protein S18 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 CDA09_01695 27001fa9dd91f08d2dffcc7c170a10ed 333 Gene3D G3DSA:1.20.1260.10 23 331 1.7E-129 T 01-11-2018 IPR012347 Ferritin-like CDA09_01695 27001fa9dd91f08d2dffcc7c170a10ed 333 Pfam PF05138 Phenylacetic acid catabolic protein 39 313 2.4E-104 T 01-11-2018 IPR007814 1,2-phenylacetyl-CoA epoxidase, subunit A/C GO:0010124 CDA09_01695 27001fa9dd91f08d2dffcc7c170a10ed 333 TIGRFAM TIGR02156 PA_CoA_Oxy1: phenylacetate-CoA oxygenase, PaaG subunit 29 317 1.3E-171 T 01-11-2018 IPR011881 1,2-phenylacetyl-CoA epoxidase, subunit A GO:0010124|GO:0097266 KEGG: 00360+1.14.13.149 CDA09_01695 27001fa9dd91f08d2dffcc7c170a10ed 333 SUPERFAMILY SSF47240 49 291 4.38E-85 T 01-11-2018 IPR009078 Ferritin-like superfamily CDA09_05770 e9acabbdbdaee17dd0d97a2320d6047d 362 Pfam PF00005 ABC transporter 18 164 2.4E-36 T 01-11-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 CDA09_05770 e9acabbdbdaee17dd0d97a2320d6047d 362 Pfam PF12857 TOBE-like domain 289 346 1.6E-15 T 01-11-2018 IPR024765 TOBE-like domain KEGG: 00920+3.6.3.25 CDA09_05770 e9acabbdbdaee17dd0d97a2320d6047d 362 SMART SM00382 27 214 3.0E-22 T 01-11-2018 IPR003593 AAA+ ATPase domain CDA09_05770 e9acabbdbdaee17dd0d97a2320d6047d 362 SUPERFAMILY SSF52540 3 245 2.73E-87 T 01-11-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CDA09_05770 e9acabbdbdaee17dd0d97a2320d6047d 362 Gene3D G3DSA:3.40.50.300 2 268 6.6E-82 T 01-11-2018 CDA09_05770 e9acabbdbdaee17dd0d97a2320d6047d 362 TIGRFAM TIGR00968 3a0106s01: sulfate ABC transporter, ATP-binding protein 3 241 3.5E-119 T 01-11-2018 IPR005666 Sulphate transport system permease protein 1 GO:0008272|GO:0015419|GO:0016020|GO:0043190 KEGG: 00920+3.6.3.25 CDA09_05770 e9acabbdbdaee17dd0d97a2320d6047d 362 ProSitePatterns PS00211 ABC transporters family signature. 137 151 - T 01-11-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 CDA09_05770 e9acabbdbdaee17dd0d97a2320d6047d 362 SUPERFAMILY SSF50331 239 347 1.3E-13 T 01-11-2018 IPR008995 Molybdate/tungstate binding, C-terminal CDA09_19545 f4529513747845cc9c8b853c8a72836d 156 Hamap MF_00480_B 30S ribosomal protein S7 [rpsG]. 1 156 35.566 T 01-11-2018 IPR005717 Ribosomal protein S7, bacterial/organellar-type GO:0003735|GO:0006412|GO:0015935 CDA09_19545 f4529513747845cc9c8b853c8a72836d 156 SUPERFAMILY SSF47973 2 149 1.07E-60 T 01-11-2018 IPR036823 Ribosomal protein S7 domain superfamily CDA09_19545 f4529513747845cc9c8b853c8a72836d 156 Gene3D G3DSA:1.10.455.10 2 155 8.0E-62 T 01-11-2018 IPR036823 Ribosomal protein S7 domain superfamily CDA09_19545 f4529513747845cc9c8b853c8a72836d 156 TIGRFAM TIGR01029 rpsG_bact: ribosomal protein uS7 3 155 4.6E-66 T 01-11-2018 IPR005717 Ribosomal protein S7, bacterial/organellar-type GO:0003735|GO:0006412|GO:0015935 CDA09_19545 f4529513747845cc9c8b853c8a72836d 156 Pfam PF00177 Ribosomal protein S7p/S5e 1 149 3.6E-67 T 01-11-2018 IPR023798 Ribosomal protein S7 domain CDA09_19545 f4529513747845cc9c8b853c8a72836d 156 ProSitePatterns PS00052 Ribosomal protein S7 signature. 20 46 - T 01-11-2018 IPR020606 Ribosomal protein S7, conserved site GO:0003723|GO:0003735|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 CDA09_19545 f4529513747845cc9c8b853c8a72836d 156 PIRSF PIRSF002122 3 156 8.5E-58 T 01-11-2018 IPR000235 Ribosomal protein S5/S7 GO:0006412 CDA09_02130 2b828b9e4553a77f2d90b3682f8ce3b1 522 Gene3D G3DSA:3.50.50.60 9 165 1.5E-15 T 01-11-2018 IPR036188 FAD/NAD(P)-binding domain superfamily CDA09_02130 2b828b9e4553a77f2d90b3682f8ce3b1 522 Pfam PF05199 GMC oxidoreductase 390 508 1.1E-22 T 01-11-2018 IPR007867 Glucose-methanol-choline oxidoreductase, C-terminal GO:0016614|GO:0055114 Reactome: R-HSA-6798163 CDA09_02130 2b828b9e4553a77f2d90b3682f8ce3b1 522 SUPERFAMILY SSF51905 12 518 4.67E-62 T 01-11-2018 IPR036188 FAD/NAD(P)-binding domain superfamily CDA09_02130 2b828b9e4553a77f2d90b3682f8ce3b1 522 SUPERFAMILY SSF54373 291 458 7.06E-15 T 01-11-2018 CDA09_02130 2b828b9e4553a77f2d90b3682f8ce3b1 522 Pfam PF00732 GMC oxidoreductase 13 304 7.2E-21 T 01-11-2018 IPR000172 Glucose-methanol-choline oxidoreductase, N-terminal GO:0016614|GO:0050660|GO:0055114 Reactome: R-HSA-6798163 CDA09_02130 2b828b9e4553a77f2d90b3682f8ce3b1 522 Gene3D G3DSA:3.50.50.60 174 345 2.6E-9 T 01-11-2018 IPR036188 FAD/NAD(P)-binding domain superfamily CDA09_02130 2b828b9e4553a77f2d90b3682f8ce3b1 522 Gene3D G3DSA:3.50.50.60 418 516 2.6E-13 T 01-11-2018 IPR036188 FAD/NAD(P)-binding domain superfamily CDA09_11540 1137650972275ee72fff58802f53edce 448 PRINTS PR00095 Anthranilate synthase component I signature 331 345 1.7E-9 T 01-11-2018 IPR019999 Anthranilate synthase component I-like GO:0009058 KEGG: 00400+4.1.3.27|KEGG: 00405+4.1.3.27|MetaCyc: PWY-5958|MetaCyc: PWY-6660|MetaCyc: PWY-6661 CDA09_11540 1137650972275ee72fff58802f53edce 448 PRINTS PR00095 Anthranilate synthase component I signature 251 264 1.7E-9 T 01-11-2018 IPR019999 Anthranilate synthase component I-like GO:0009058 KEGG: 00400+4.1.3.27|KEGG: 00405+4.1.3.27|MetaCyc: PWY-5958|MetaCyc: PWY-6660|MetaCyc: PWY-6661 CDA09_11540 1137650972275ee72fff58802f53edce 448 PRINTS PR00095 Anthranilate synthase component I signature 237 250 1.7E-9 T 01-11-2018 IPR019999 Anthranilate synthase component I-like GO:0009058 KEGG: 00400+4.1.3.27|KEGG: 00405+4.1.3.27|MetaCyc: PWY-5958|MetaCyc: PWY-6660|MetaCyc: PWY-6661 CDA09_11540 1137650972275ee72fff58802f53edce 448 Gene3D G3DSA:3.60.120.10 48 416 1.7E-109 T 01-11-2018 IPR005801 ADC synthase GO:0009058 CDA09_11540 1137650972275ee72fff58802f53edce 448 TIGRFAM TIGR00553 pabB: aminodeoxychorismate synthase, component I 114 407 7.4E-102 T 01-11-2018 IPR005802 Para-aminobenzoate synthase, component I GO:0009396 KEGG: 00790+2.6.1.85|MetaCyc: PWY-6543 CDA09_11540 1137650972275ee72fff58802f53edce 448 SUPERFAMILY SSF56322 20 410 1.15E-97 T 01-11-2018 IPR005801 ADC synthase GO:0009058 CDA09_11540 1137650972275ee72fff58802f53edce 448 Pfam PF00425 chorismate binding enzyme 132 403 8.9E-80 T 01-11-2018 IPR015890 Chorismate-utilising enzyme, C-terminal CDA09_21445 1f0a4d612f08793b8067c08cb73942f9 303 SUPERFAMILY SSF54593 130 297 1.31E-31 T 01-11-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase CDA09_21445 1f0a4d612f08793b8067c08cb73942f9 303 Gene3D G3DSA:3.10.180.10 127 302 1.8E-54 T 01-11-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase CDA09_21445 1f0a4d612f08793b8067c08cb73942f9 303 ProSitePatterns PS00082 Extradiol ring-cleavage dioxygenases signature. 249 270 - T 01-11-2018 IPR000486 Extradiol ring-cleavage dioxygenase, class I /II GO:0003824|GO:0006725|GO:0008198|GO:0055114 CDA09_21445 1f0a4d612f08793b8067c08cb73942f9 303 Gene3D G3DSA:3.10.180.10 1 117 8.3E-28 T 01-11-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase CDA09_21445 1f0a4d612f08793b8067c08cb73942f9 303 Pfam PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily 136 271 3.6E-30 T 01-11-2018 IPR004360 Glyoxalase/fosfomycin resistance/dioxygenase domain CDA09_21445 1f0a4d612f08793b8067c08cb73942f9 303 SUPERFAMILY SSF54593 2 113 1.02E-16 T 01-11-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase CDA09_01315 0085b3a3ec795401568f62c061d45025 657 Pfam PF16327 Cytochrome c-type biogenesis protein CcmF C-terminal 315 638 1.4E-126 T 01-11-2018 IPR032523 Cytochrome c-type biogenesis protein CcmF, C-terminal CDA09_01315 0085b3a3ec795401568f62c061d45025 657 TIGRFAM TIGR00353 nrfE: cytochrome c-type biogenesis protein CcmF 53 641 8.2E-224 T 01-11-2018 IPR003568 Cytochrome c-type biogenesis protein CcmF GO:0015232|GO:0015886|GO:0016020|GO:0017004 CDA09_01315 0085b3a3ec795401568f62c061d45025 657 PRINTS PR01411 Cytochrome c-type biogenesis protein CcmF signature 313 328 9.5E-59 T 01-11-2018 IPR003568 Cytochrome c-type biogenesis protein CcmF GO:0015232|GO:0015886|GO:0016020|GO:0017004 CDA09_01315 0085b3a3ec795401568f62c061d45025 657 PRINTS PR01411 Cytochrome c-type biogenesis protein CcmF signature 4 28 9.5E-59 T 01-11-2018 IPR003568 Cytochrome c-type biogenesis protein CcmF GO:0015232|GO:0015886|GO:0016020|GO:0017004 CDA09_01315 0085b3a3ec795401568f62c061d45025 657 PRINTS PR01411 Cytochrome c-type biogenesis protein CcmF signature 113 136 9.5E-59 T 01-11-2018 IPR003568 Cytochrome c-type biogenesis protein CcmF GO:0015232|GO:0015886|GO:0016020|GO:0017004 CDA09_01315 0085b3a3ec795401568f62c061d45025 657 PRINTS PR01411 Cytochrome c-type biogenesis protein CcmF signature 394 413 9.5E-59 T 01-11-2018 IPR003568 Cytochrome c-type biogenesis protein CcmF GO:0015232|GO:0015886|GO:0016020|GO:0017004 CDA09_01315 0085b3a3ec795401568f62c061d45025 657 PRINTS PR01411 Cytochrome c-type biogenesis protein CcmF signature 631 644 9.5E-59 T 01-11-2018 IPR003568 Cytochrome c-type biogenesis protein CcmF GO:0015232|GO:0015886|GO:0016020|GO:0017004 CDA09_01315 0085b3a3ec795401568f62c061d45025 657 PRINTS PR01411 Cytochrome c-type biogenesis protein CcmF signature 351 368 9.5E-59 T 01-11-2018 IPR003568 Cytochrome c-type biogenesis protein CcmF GO:0015232|GO:0015886|GO:0016020|GO:0017004 CDA09_01315 0085b3a3ec795401568f62c061d45025 657 PRINTS PR01411 Cytochrome c-type biogenesis protein CcmF signature 189 204 9.5E-59 T 01-11-2018 IPR003568 Cytochrome c-type biogenesis protein CcmF GO:0015232|GO:0015886|GO:0016020|GO:0017004 CDA09_01315 0085b3a3ec795401568f62c061d45025 657 Pfam PF01578 Cytochrome C assembly protein 89 295 6.4E-53 T 01-11-2018 IPR002541 Cytochrome c assembly protein GO:0017004|GO:0020037 CDA09_01315 0085b3a3ec795401568f62c061d45025 657 PRINTS PR01410 Cytochrome c-type biogenesis protein signature 244 264 8.2E-93 T 01-11-2018 IPR003567 Cytochrome c-type biogenesis protein GO:0015232|GO:0015886|GO:0016020|GO:0017004 CDA09_01315 0085b3a3ec795401568f62c061d45025 657 PRINTS PR01410 Cytochrome c-type biogenesis protein signature 132 149 8.2E-93 T 01-11-2018 IPR003567 Cytochrome c-type biogenesis protein GO:0015232|GO:0015886|GO:0016020|GO:0017004 CDA09_01315 0085b3a3ec795401568f62c061d45025 657 PRINTS PR01410 Cytochrome c-type biogenesis protein signature 210 236 8.2E-93 T 01-11-2018 IPR003567 Cytochrome c-type biogenesis protein GO:0015232|GO:0015886|GO:0016020|GO:0017004 CDA09_01315 0085b3a3ec795401568f62c061d45025 657 PRINTS PR01410 Cytochrome c-type biogenesis protein signature 274 294 8.2E-93 T 01-11-2018 IPR003567 Cytochrome c-type biogenesis protein GO:0015232|GO:0015886|GO:0016020|GO:0017004 CDA09_01315 0085b3a3ec795401568f62c061d45025 657 PRINTS PR01410 Cytochrome c-type biogenesis protein signature 310 329 8.2E-93 T 01-11-2018 IPR003567 Cytochrome c-type biogenesis protein GO:0015232|GO:0015886|GO:0016020|GO:0017004 CDA09_01315 0085b3a3ec795401568f62c061d45025 657 PRINTS PR01410 Cytochrome c-type biogenesis protein signature 159 181 8.2E-93 T 01-11-2018 IPR003567 Cytochrome c-type biogenesis protein GO:0015232|GO:0015886|GO:0016020|GO:0017004 CDA09_01315 0085b3a3ec795401568f62c061d45025 657 PRINTS PR01410 Cytochrome c-type biogenesis protein signature 80 106 8.2E-93 T 01-11-2018 IPR003567 Cytochrome c-type biogenesis protein GO:0015232|GO:0015886|GO:0016020|GO:0017004 CDA09_01315 0085b3a3ec795401568f62c061d45025 657 PRINTS PR01410 Cytochrome c-type biogenesis protein signature 294 310 8.2E-93 T 01-11-2018 IPR003567 Cytochrome c-type biogenesis protein GO:0015232|GO:0015886|GO:0016020|GO:0017004 CDA09_09460 25d3895c84080675cf367544a8380e08 276 Pfam PF12697 Alpha/beta hydrolase family 33 266 3.5E-19 T 01-11-2018 IPR000073 Alpha/beta hydrolase fold-1 CDA09_09460 25d3895c84080675cf367544a8380e08 276 PRINTS PR00111 Alpha/beta hydrolase fold signature 60 75 3.8E-16 T 01-11-2018 IPR000073 Alpha/beta hydrolase fold-1 CDA09_09460 25d3895c84080675cf367544a8380e08 276 PRINTS PR00111 Alpha/beta hydrolase fold signature 119 132 3.8E-16 T 01-11-2018 IPR000073 Alpha/beta hydrolase fold-1 CDA09_09460 25d3895c84080675cf367544a8380e08 276 PRINTS PR00111 Alpha/beta hydrolase fold signature 105 118 3.8E-16 T 01-11-2018 IPR000073 Alpha/beta hydrolase fold-1 CDA09_09460 25d3895c84080675cf367544a8380e08 276 PRINTS PR00111 Alpha/beta hydrolase fold signature 219 233 3.8E-16 T 01-11-2018 IPR000073 Alpha/beta hydrolase fold-1 CDA09_09460 25d3895c84080675cf367544a8380e08 276 Gene3D G3DSA:3.40.50.1820 10 276 5.5E-65 T 01-11-2018 IPR029058 Alpha/Beta hydrolase fold CDA09_09460 25d3895c84080675cf367544a8380e08 276 SUPERFAMILY SSF53474 10 274 4.05E-61 T 01-11-2018 IPR029058 Alpha/Beta hydrolase fold CDA09_02895 382a0a1773a3d42294822237063aeb35 191 Pfam PF04011 LemA family 10 185 3.2E-56 T 01-11-2018 IPR007156 LemA CDA09_02895 382a0a1773a3d42294822237063aeb35 191 Gene3D G3DSA:1.20.1440.20 16 185 1.0E-49 T 01-11-2018 IPR023353 LemA-like domain superfamily CDA09_02895 382a0a1773a3d42294822237063aeb35 191 SUPERFAMILY SSF140478 26 173 1.83E-45 T 01-11-2018 IPR023353 LemA-like domain superfamily CDA09_12800 938d3e13e101392d64c116bf9f500181 506 PIRSF PIRSF001267 1 499 2.3E-191 T 01-11-2018 IPR030673 Pyrophosphatase, GppA/Ppx-type KEGG: 00230+3.6.1.40 CDA09_12800 938d3e13e101392d64c116bf9f500181 506 SUPERFAMILY SSF53067 6 127 3.24E-33 T 01-11-2018 CDA09_12800 938d3e13e101392d64c116bf9f500181 506 TIGRFAM TIGR03706 exo_poly_only: exopolyphosphatase 6 300 2.7E-98 T 01-11-2018 IPR022371 Exopolyphosphatase GO:0004309|GO:0006793 CDA09_12800 938d3e13e101392d64c116bf9f500181 506 Gene3D G3DSA:1.10.3210.10 304 504 5.5E-55 T 01-11-2018 CDA09_12800 938d3e13e101392d64c116bf9f500181 506 Gene3D G3DSA:3.30.420.40 7 297 1.5E-84 T 01-11-2018 CDA09_12800 938d3e13e101392d64c116bf9f500181 506 SUPERFAMILY SSF53067 132 305 1.81E-43 T 01-11-2018 CDA09_12800 938d3e13e101392d64c116bf9f500181 506 Gene3D G3DSA:3.30.420.150 110 289 1.5E-84 T 01-11-2018 CDA09_12800 938d3e13e101392d64c116bf9f500181 506 SUPERFAMILY SSF109604 307 499 1.0E-42 T 01-11-2018 CDA09_12800 938d3e13e101392d64c116bf9f500181 506 Pfam PF02541 Ppx/GppA phosphatase family 22 301 5.0E-71 T 01-11-2018 IPR003695 Ppx/GppA phosphatase KEGG: 00230+3.6.1.40 CDA09_02920 dab71a4b4a79c69a066b6aec42dee553 251 SUPERFAMILY SSF55729 15 239 1.84E-32 T 01-11-2018 IPR016181 Acyl-CoA N-acyltransferase CDA09_02920 dab71a4b4a79c69a066b6aec42dee553 251 Pfam PF13444 Acetyltransferase (GNAT) domain 34 139 7.2E-18 T 01-11-2018 CDA09_02920 dab71a4b4a79c69a066b6aec42dee553 251 TIGRFAM TIGR03694 exosort_acyl: N-acyl amino acid synthase, PEP-CTERM/exosortase system-associated 12 243 3.0E-77 T 01-11-2018 IPR022484 PEP-CTERM/exosortase system-associated acyltransferase, predicted CDA09_02920 dab71a4b4a79c69a066b6aec42dee553 251 Gene3D G3DSA:3.40.630.30 19 230 1.6E-44 T 01-11-2018 CDA09_19035 c0676ad4a2c7f1a0f1a5928643a3c9c4 235 Pfam PF03591 AzlC protein 18 158 2.2E-30 T 01-11-2018 IPR011606 Branched-chain amino acid transport, permease CDA09_04320 91ff02de15220a6ce211f843b94def90 133 Pfam PF01502 Phosphoribosyl-AMP cyclohydrolase 35 109 8.1E-37 T 01-11-2018 IPR002496 Phosphoribosyl-AMP cyclohydrolase domain GO:0000105|GO:0004635 KEGG: 00340+3.5.4.19 CDA09_04320 91ff02de15220a6ce211f843b94def90 133 Gene3D G3DSA:3.10.20.400 3 100 1.2E-40 T 01-11-2018 IPR038019 Phosphoribosyl-AMP cyclohydrolase domain superfamily KEGG: 00340+3.5.4.19 CDA09_04320 91ff02de15220a6ce211f843b94def90 133 SUPERFAMILY SSF141734 8 119 2.75E-49 T 01-11-2018 IPR038019 Phosphoribosyl-AMP cyclohydrolase domain superfamily KEGG: 00340+3.5.4.19 CDA09_04320 91ff02de15220a6ce211f843b94def90 133 Hamap MF_01021 Phosphoribosyl-AMP cyclohydrolase [hisI]. 9 113 32.896 T 01-11-2018 IPR026660 Phosphoribosyl-AMP cyclohydrolase GO:0000105|GO:0004635 KEGG: 00340+3.5.4.19 CDA09_04320 91ff02de15220a6ce211f843b94def90 133 ProDom PD002610 PHOSPHORIBOSYL-AMP BIOSYNTHESIS CYCLOHYDROLASE HYDROLASE HISTIDINE AMINO-ACID PRA-CH PHOSPHORIBOSYL-ATP BIFUNCTIONAL INCLUDES: 58 113 2.0E-24 T 01-11-2018 IPR002496 Phosphoribosyl-AMP cyclohydrolase domain GO:0000105|GO:0004635 KEGG: 00340+3.5.4.19 CDA09_04545 582c9b2c38201533643021b690c8b1e0 263 SMART SM00382 33 216 4.9E-18 T 01-11-2018 IPR003593 AAA+ ATPase domain CDA09_04545 582c9b2c38201533643021b690c8b1e0 263 TIGRFAM TIGR01184 ntrCD: nitrate ABC transporter, ATP-binding proteins C and D 24 254 7.1E-100 T 01-11-2018 IPR005890 Nitrate transport ATP-binding subunit C/D GO:0015112|GO:0015706|GO:0016020 CDA09_04545 582c9b2c38201533643021b690c8b1e0 263 Gene3D G3DSA:3.40.50.300 1 247 5.7E-60 T 01-11-2018 CDA09_04545 582c9b2c38201533643021b690c8b1e0 263 ProSitePatterns PS00211 ABC transporters family signature. 139 153 - T 01-11-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 CDA09_04545 582c9b2c38201533643021b690c8b1e0 263 Pfam PF00005 ABC transporter 24 166 8.1E-30 T 01-11-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 CDA09_04545 582c9b2c38201533643021b690c8b1e0 263 SUPERFAMILY SSF52540 4 234 6.34E-67 T 01-11-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CDA09_04355 32144164351565c5b79112e5b26ee9b9 248 Gene3D G3DSA:3.40.1390.30 97 219 1.4E-75 T 01-11-2018 CDA09_04355 32144164351565c5b79112e5b26ee9b9 248 TIGRFAM TIGR00486 YbgI_SA1388: dinuclear metal center protein, YbgI/SA1388 family 1 247 5.7E-59 T 01-11-2018 IPR002678 GTP cyclohydrolase 1 type 2/Nif3 CDA09_04355 32144164351565c5b79112e5b26ee9b9 248 Pfam PF01784 NIF3 (NGG1p interacting factor 3) 8 234 7.1E-56 T 01-11-2018 IPR002678 GTP cyclohydrolase 1 type 2/Nif3 CDA09_04355 32144164351565c5b79112e5b26ee9b9 248 Gene3D G3DSA:3.40.1390.30 14 232 1.4E-75 T 01-11-2018 CDA09_04355 32144164351565c5b79112e5b26ee9b9 248 SUPERFAMILY SSF102705 1 247 2.49E-76 T 01-11-2018 IPR036069 GTP cyclohydrolase 1 type 2/Nif3 superfamily CDA09_22050 493e74f4e563ec6cd49d49a6ef8118ff 178 TIGRFAM TIGR03765 ICE_PFL_4695: integrating conjugative element protein, PFL_4695 family 74 177 8.9E-42 T 01-11-2018 IPR021300 Integrating conjugative element protein, PFL4695 CDA09_22050 493e74f4e563ec6cd49d49a6ef8118ff 178 Pfam PF11072 Protein of unknown function (DUF2859) 30 176 3.5E-55 T 01-11-2018 IPR021300 Integrating conjugative element protein, PFL4695 CDA09_02885 fe1b504dfe2a051ce9f782dff5fe62de 635 SUPERFAMILY SSF52540 315 523 4.27E-46 T 01-11-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CDA09_02885 fe1b504dfe2a051ce9f782dff5fe62de 635 SUPERFAMILY SSF52540 4 231 1.54E-46 T 01-11-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CDA09_02885 fe1b504dfe2a051ce9f782dff5fe62de 635 Pfam PF12848 ABC transporter 224 295 5.8E-10 T 01-11-2018 IPR032781 ABC-transporter extension domain CDA09_02885 fe1b504dfe2a051ce9f782dff5fe62de 635 Gene3D G3DSA:3.40.50.300 282 548 7.0E-62 T 01-11-2018 CDA09_02885 fe1b504dfe2a051ce9f782dff5fe62de 635 Pfam PF00005 ABC transporter 19 185 4.0E-22 T 01-11-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 CDA09_02885 fe1b504dfe2a051ce9f782dff5fe62de 635 Gene3D G3DSA:1.10.287.380 553 635 8.0E-25 T 01-11-2018 IPR037118 Valyl-tRNA synthetase, tRNA-binding arm superfamily GO:0000166|GO:0004832|GO:0005524|GO:0005737|GO:0006438 KEGG: 00970+6.1.1.9|Reactome: R-HSA-379716 CDA09_02885 fe1b504dfe2a051ce9f782dff5fe62de 635 Pfam PF16326 ABC transporter C-terminal domain 563 631 1.5E-21 T 01-11-2018 IPR032524 ABC transporter Uup, C-terminal GO:0003677 CDA09_02885 fe1b504dfe2a051ce9f782dff5fe62de 635 ProSitePatterns PS00211 ABC transporters family signature. 441 455 - T 01-11-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 CDA09_02885 fe1b504dfe2a051ce9f782dff5fe62de 635 Pfam PF00005 ABC transporter 336 469 1.8E-23 T 01-11-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 CDA09_02885 fe1b504dfe2a051ce9f782dff5fe62de 635 SMART SM00382 344 515 7.2E-13 T 01-11-2018 IPR003593 AAA+ ATPase domain CDA09_02885 fe1b504dfe2a051ce9f782dff5fe62de 635 SMART SM00382 28 230 5.9E-17 T 01-11-2018 IPR003593 AAA+ ATPase domain CDA09_02885 fe1b504dfe2a051ce9f782dff5fe62de 635 Gene3D G3DSA:3.40.50.300 10 279 2.7E-64 T 01-11-2018 CDA09_02935 0d9f8fcb9608ca6cba1fd6825b1a27fc 516 Gene3D G3DSA:3.40.50.300 244 515 1.8E-101 T 01-11-2018 CDA09_02935 0d9f8fcb9608ca6cba1fd6825b1a27fc 516 Pfam PF00437 Type II/IV secretion system protein 137 406 4.1E-75 T 01-11-2018 IPR001482 Type II/IV secretion system protein CDA09_02935 0d9f8fcb9608ca6cba1fd6825b1a27fc 516 Pfam PF05157 Type II secretion system (T2SS), protein E, N-terminal domain 11 94 3.2E-12 T 01-11-2018 IPR007831 General secretory system II, protein E, N-terminal CDA09_02935 0d9f8fcb9608ca6cba1fd6825b1a27fc 516 Gene3D G3DSA:3.30.450.90 102 235 4.9E-42 T 01-11-2018 CDA09_02935 0d9f8fcb9608ca6cba1fd6825b1a27fc 516 SUPERFAMILY SSF160246 6 91 2.3E-11 T 01-11-2018 IPR037257 General secretory system II, protein E, N-terminal superfamily CDA09_02935 0d9f8fcb9608ca6cba1fd6825b1a27fc 516 ProSitePatterns PS00662 Bacterial type II secretion system protein E signature. 335 349 - T 01-11-2018 IPR001482 Type II/IV secretion system protein CDA09_02935 0d9f8fcb9608ca6cba1fd6825b1a27fc 516 SUPERFAMILY SSF52540 124 513 9.13E-94 T 01-11-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CDA09_04810 67d2d6804fcebb619be1fc5e9d90994b 228 SUPERFAMILY SSF46894 118 218 1.02E-25 T 01-11-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 CDA09_04810 67d2d6804fcebb619be1fc5e9d90994b 228 SMART SM00862 144 217 2.7E-24 T 01-11-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 CDA09_04810 67d2d6804fcebb619be1fc5e9d90994b 228 Gene3D G3DSA:3.40.50.2300 1 121 2.4E-38 T 01-11-2018 CDA09_04810 67d2d6804fcebb619be1fc5e9d90994b 228 Gene3D G3DSA:1.10.10.10 122 227 7.1E-28 T 01-11-2018 IPR036388 Winged helix-like DNA-binding domain superfamily CDA09_04810 67d2d6804fcebb619be1fc5e9d90994b 228 Pfam PF00072 Response regulator receiver domain 3 112 8.0E-26 T 01-11-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 CDA09_04810 67d2d6804fcebb619be1fc5e9d90994b 228 Pfam PF00486 Transcriptional regulatory protein, C terminal 144 217 5.0E-21 T 01-11-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 CDA09_04810 67d2d6804fcebb619be1fc5e9d90994b 228 SMART SM00448 1 112 9.5E-39 T 01-11-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 CDA09_04810 67d2d6804fcebb619be1fc5e9d90994b 228 SUPERFAMILY SSF52172 1 124 9.82E-39 T 01-11-2018 IPR011006 CheY-like superfamily CDA09_04220 539fad5dfd7f84fb304502c575ea1014 331 Gene3D G3DSA:3.10.580.10 203 328 2.1E-42 T 01-11-2018 CDA09_04220 539fad5dfd7f84fb304502c575ea1014 331 Pfam PF01380 SIS domain 48 179 4.2E-34 T 01-11-2018 IPR001347 Sugar isomerase (SIS) GO:0097367|GO:1901135 CDA09_04220 539fad5dfd7f84fb304502c575ea1014 331 SUPERFAMILY SSF53697 17 328 2.67E-71 T 01-11-2018 CDA09_04220 539fad5dfd7f84fb304502c575ea1014 331 Gene3D G3DSA:3.40.50.10490 11 202 3.0E-67 T 01-11-2018 CDA09_04220 539fad5dfd7f84fb304502c575ea1014 331 PIRSF PIRSF004692 2 331 4.3E-130 T 01-11-2018 IPR004800 Phosphosugar isomerase, KdsD/KpsF-type GO:0005975|GO:0016853 CDA09_04220 539fad5dfd7f84fb304502c575ea1014 331 SMART SM00116 217 265 25.0 T 01-11-2018 IPR000644 CBS domain CDA09_04220 539fad5dfd7f84fb304502c575ea1014 331 SMART SM00116 282 330 0.075 T 01-11-2018 IPR000644 CBS domain CDA09_04220 539fad5dfd7f84fb304502c575ea1014 331 TIGRFAM TIGR00393 kpsF: sugar isomerase, KpsF/GutQ family 52 320 1.2E-105 T 01-11-2018 IPR004800 Phosphosugar isomerase, KdsD/KpsF-type GO:0005975|GO:0016853 CDA09_04220 539fad5dfd7f84fb304502c575ea1014 331 Pfam PF00571 CBS domain 276 328 1.4E-8 T 01-11-2018 IPR000644 CBS domain CDA09_04220 539fad5dfd7f84fb304502c575ea1014 331 Pfam PF00571 CBS domain 208 265 3.0E-5 T 01-11-2018 IPR000644 CBS domain CDA09_07865 410f1d59009407413bdabda4d301617f 263 Gene3D G3DSA:3.40.190.10 111 216 3.1E-75 T 01-11-2018 CDA09_07865 410f1d59009407413bdabda4d301617f 263 SMART SM00062 25 259 4.5E-67 T 01-11-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF CDA09_07865 410f1d59009407413bdabda4d301617f 263 SMART SM00079 25 258 0.006 T 01-11-2018 IPR001320 Ionotropic glutamate receptor GO:0004970|GO:0016020 CDA09_07865 410f1d59009407413bdabda4d301617f 263 ProSitePatterns PS01039 Bacterial extracellular solute-binding proteins, family 3 signature. 48 61 - T 01-11-2018 IPR018313 Solute-binding protein family 3, conserved site CDA09_07865 410f1d59009407413bdabda4d301617f 263 TIGRFAM TIGR01096 3A0103s03R: lysine-arginine-ornithine-binding periplasmic protein 4 256 2.8E-81 T 01-11-2018 IPR005768 Specific amino acids and opine-binding periplasmic protein, ABC transporter GO:0030288|GO:0071705 CDA09_07865 410f1d59009407413bdabda4d301617f 263 SUPERFAMILY SSF53850 1 260 1.27E-69 T 01-11-2018 CDA09_07865 410f1d59009407413bdabda4d301617f 263 Pfam PF00497 Bacterial extracellular solute-binding proteins, family 3 26 257 1.6E-62 T 01-11-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF CDA09_07865 410f1d59009407413bdabda4d301617f 263 Gene3D G3DSA:3.40.190.10 28 255 3.1E-75 T 01-11-2018 CDA09_06835 e0b17d27304a1ec016d3643dff055b4c 386 SUPERFAMILY SSF55785 55 108 1.29E-8 T 01-11-2018 IPR035965 PAS domain superfamily CDA09_06835 e0b17d27304a1ec016d3643dff055b4c 386 PRINTS PR00344 Bacterial sensor protein C-terminal signature 321 331 6.2E-18 T 01-11-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 CDA09_06835 e0b17d27304a1ec016d3643dff055b4c 386 PRINTS PR00344 Bacterial sensor protein C-terminal signature 356 369 6.2E-18 T 01-11-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 CDA09_06835 e0b17d27304a1ec016d3643dff055b4c 386 PRINTS PR00344 Bacterial sensor protein C-terminal signature 303 317 6.2E-18 T 01-11-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 CDA09_06835 e0b17d27304a1ec016d3643dff055b4c 386 PRINTS PR00344 Bacterial sensor protein C-terminal signature 332 350 6.2E-18 T 01-11-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 CDA09_06835 e0b17d27304a1ec016d3643dff055b4c 386 SMART SM00388 158 224 3.3E-16 T 01-11-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 CDA09_06835 e0b17d27304a1ec016d3643dff055b4c 386 SMART SM00387 266 372 1.4E-29 T 01-11-2018 IPR003594 Histidine kinase/HSP90-like ATPase CDA09_06835 e0b17d27304a1ec016d3643dff055b4c 386 SUPERFAMILY SSF55874 214 374 3.41E-40 T 01-11-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily CDA09_06835 e0b17d27304a1ec016d3643dff055b4c 386 Gene3D G3DSA:1.10.287.130 148 221 1.8E-13 T 01-11-2018 CDA09_06835 e0b17d27304a1ec016d3643dff055b4c 386 Gene3D G3DSA:3.30.450.20 44 147 9.7E-8 T 01-11-2018 CDA09_06835 e0b17d27304a1ec016d3643dff055b4c 386 SUPERFAMILY SSF47384 147 222 8.04E-14 T 01-11-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 CDA09_06835 e0b17d27304a1ec016d3643dff055b4c 386 Pfam PF00512 His Kinase A (phospho-acceptor) domain 159 223 1.9E-12 T 01-11-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 CDA09_06835 e0b17d27304a1ec016d3643dff055b4c 386 Gene3D G3DSA:3.30.565.10 226 374 2.8E-40 T 01-11-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily CDA09_06835 e0b17d27304a1ec016d3643dff055b4c 386 Pfam PF13188 PAS domain 55 102 2.8E-7 T 01-11-2018 IPR000014 PAS domain CDA09_06835 e0b17d27304a1ec016d3643dff055b4c 386 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 266 370 3.2E-19 T 01-11-2018 IPR003594 Histidine kinase/HSP90-like ATPase CDA09_21660 62778e00f3e9725c5c8f493566b71a1f 251 SUPERFAMILY SSF52833 52 223 1.89E-30 T 01-11-2018 IPR036249 Thioredoxin-like superfamily CDA09_21660 62778e00f3e9725c5c8f493566b71a1f 251 Pfam PF13462 Thioredoxin 59 201 9.6E-15 T 01-11-2018 IPR012336 Thioredoxin-like fold CDA09_21660 62778e00f3e9725c5c8f493566b71a1f 251 Gene3D G3DSA:3.40.30.10 59 227 1.6E-33 T 01-11-2018 CDA09_01680 54eb361140d73f52bb173a232f9009a8 510 Pfam PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain 9 185 2.0E-58 T 01-11-2018 IPR006176 3-hydroxyacyl-CoA dehydrogenase, NAD binding GO:0003857|GO:0006631|GO:0016491|GO:0055114 KEGG: 00062+4.2.1.17+1.1.1.35|KEGG: 00071+4.2.1.17+1.1.1.35|KEGG: 00120+1.1.1.35|KEGG: 00280+4.2.1.17+1.1.1.35|KEGG: 00281+4.2.1.17+1.1.1.35|KEGG: 00310+4.2.1.17+1.1.1.35|KEGG: 00360+4.2.1.17|KEGG: 00362+4.2.1.17+1.1.1.35|KEGG: 00380+4.2.1.17+1.1.1.35|KEGG: 00410+4.2.1.17|KEGG: 00592+4.2.1.17|KEGG: 00623+1.1.1.35|KEGG: 00627+4.2.1.17|KEGG: 00640+4.2.1.17|KEGG: 00650+4.2.1.17+1.1.1.35|KEGG: 00720+4.2.1.17+1.1.1.35|KEGG: 00903+4.2.1.17|KEGG: 00930+4.2.1.17+1.1.1.35|MetaCyc: PWY-1361|MetaCyc: PWY-5109|MetaCyc: PWY-5136|MetaCyc: PWY-5138|MetaCyc: PWY-5177|MetaCyc: PWY-5789|MetaCyc: PWY-6435|MetaCyc: PWY-6583|MetaCyc: PWY-6863|MetaCyc: PWY-6883|MetaCyc: PWY-6944|MetaCyc: PWY-6945|MetaCyc: PWY-6946|MetaCyc: PWY-7007|MetaCyc: PWY-7046|MetaCyc: PWY-7094|MetaCyc: PWY-7216|MetaCyc: PWY-735|MetaCyc: PWY-7401|MetaCyc: PWY-7606|MetaCyc: PWY-7654|MetaCyc: PWY-7656|MetaCyc: PWY-7726|MetaCyc: PWY-7778|MetaCyc: PWY-7779 CDA09_01680 54eb361140d73f52bb173a232f9009a8 510 TIGRFAM TIGR02279 PaaC-3OHAcCoADH: 3-hydroxyacyl-CoA dehydrogenase PaaC 4 510 6.4E-266 T 01-11-2018 IPR011967 3-hydroxyacyl-CoA dehydrogenase PaaC GO:0008691|GO:0010124 CDA09_01680 54eb361140d73f52bb173a232f9009a8 510 Gene3D G3DSA:3.30.750.190 294 418 7.3E-91 T 01-11-2018 CDA09_01680 54eb361140d73f52bb173a232f9009a8 510 Gene3D G3DSA:3.40.50.720 5 192 6.6E-64 T 01-11-2018 CDA09_01680 54eb361140d73f52bb173a232f9009a8 510 ProSitePatterns PS00067 3-hydroxyacyl-CoA dehydrogenase signature. 187 212 - T 01-11-2018 IPR006180 3-hydroxyacyl-CoA dehydrogenase, conserved site GO:0003857|GO:0006631|GO:0016491|GO:0055114 KEGG: 00062+4.2.1.17+1.1.1.35|KEGG: 00071+5.1.2.3+4.2.1.17+1.1.1.35|KEGG: 00120+1.1.1.35|KEGG: 00280+4.2.1.17+1.1.1.35|KEGG: 00281+4.2.1.17+1.1.1.35|KEGG: 00310+4.2.1.17+1.1.1.35|KEGG: 00360+4.2.1.17|KEGG: 00362+4.2.1.17+1.1.1.35|KEGG: 00380+4.2.1.17+1.1.1.35|KEGG: 00410+4.2.1.17|KEGG: 00592+4.2.1.17|KEGG: 00623+1.1.1.35|KEGG: 00627+4.2.1.17|KEGG: 00640+4.2.1.17|KEGG: 00650+5.1.2.3+4.2.1.17+1.1.1.35|KEGG: 00720+4.2.1.17+1.1.1.35|KEGG: 00903+4.2.1.17|KEGG: 00930+4.2.1.17+1.1.1.35|MetaCyc: PWY-1361|MetaCyc: PWY-5109|MetaCyc: PWY-5136|MetaCyc: PWY-5138|MetaCyc: PWY-5177|MetaCyc: PWY-5789|MetaCyc: PWY-6435|MetaCyc: PWY-6583|MetaCyc: PWY-6863|MetaCyc: PWY-6883|MetaCyc: PWY-6944|MetaCyc: PWY-6945|MetaCyc: PWY-6946|MetaCyc: PWY-7007|MetaCyc: PWY-7046|MetaCyc: PWY-7094|MetaCyc: PWY-7216|MetaCyc: PWY-735|MetaCyc: PWY-7401|MetaCyc: PWY-7606|MetaCyc: PWY-7654|MetaCyc: PWY-7656|MetaCyc: PWY-7726|MetaCyc: PWY-7778|MetaCyc: PWY-7779 CDA09_01680 54eb361140d73f52bb173a232f9009a8 510 SUPERFAMILY SSF51735 8 189 6.57E-53 T 01-11-2018 IPR036291 NAD(P)-binding domain superfamily CDA09_01680 54eb361140d73f52bb173a232f9009a8 510 Pfam PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain 190 287 2.2E-29 T 01-11-2018 IPR006108 3-hydroxyacyl-CoA dehydrogenase, C-terminal GO:0003857|GO:0006631|GO:0016491|GO:0055114 KEGG: 00062+4.2.1.17+1.1.1.35|KEGG: 00071+4.2.1.17+1.1.1.35|KEGG: 00120+1.1.1.35|KEGG: 00280+4.2.1.17+1.1.1.35|KEGG: 00281+4.2.1.17+1.1.1.35|KEGG: 00310+4.2.1.17+1.1.1.35|KEGG: 00360+4.2.1.17|KEGG: 00362+4.2.1.17+1.1.1.35|KEGG: 00380+4.2.1.17+1.1.1.35|KEGG: 00410+4.2.1.17|KEGG: 00592+4.2.1.17|KEGG: 00623+1.1.1.35|KEGG: 00627+4.2.1.17|KEGG: 00640+4.2.1.17|KEGG: 00650+4.2.1.17+1.1.1.35|KEGG: 00720+4.2.1.17+1.1.1.35|KEGG: 00903+4.2.1.17|KEGG: 00930+4.2.1.17+1.1.1.35|MetaCyc: PWY-1361|MetaCyc: PWY-5109|MetaCyc: PWY-5136|MetaCyc: PWY-5138|MetaCyc: PWY-5177|MetaCyc: PWY-5789|MetaCyc: PWY-6435|MetaCyc: PWY-6583|MetaCyc: PWY-6863|MetaCyc: PWY-6883|MetaCyc: PWY-6944|MetaCyc: PWY-6945|MetaCyc: PWY-6946|MetaCyc: PWY-7007|MetaCyc: PWY-7046|MetaCyc: PWY-7094|MetaCyc: PWY-7216|MetaCyc: PWY-735|MetaCyc: PWY-7401|MetaCyc: PWY-7606|MetaCyc: PWY-7654|MetaCyc: PWY-7656|MetaCyc: PWY-7726|MetaCyc: PWY-7778|MetaCyc: PWY-7779 CDA09_01680 54eb361140d73f52bb173a232f9009a8 510 Pfam PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain 421 506 3.2E-14 T 01-11-2018 IPR006108 3-hydroxyacyl-CoA dehydrogenase, C-terminal GO:0003857|GO:0006631|GO:0016491|GO:0055114 KEGG: 00062+4.2.1.17+1.1.1.35|KEGG: 00071+4.2.1.17+1.1.1.35|KEGG: 00120+1.1.1.35|KEGG: 00280+4.2.1.17+1.1.1.35|KEGG: 00281+4.2.1.17+1.1.1.35|KEGG: 00310+4.2.1.17+1.1.1.35|KEGG: 00360+4.2.1.17|KEGG: 00362+4.2.1.17+1.1.1.35|KEGG: 00380+4.2.1.17+1.1.1.35|KEGG: 00410+4.2.1.17|KEGG: 00592+4.2.1.17|KEGG: 00623+1.1.1.35|KEGG: 00627+4.2.1.17|KEGG: 00640+4.2.1.17|KEGG: 00650+4.2.1.17+1.1.1.35|KEGG: 00720+4.2.1.17+1.1.1.35|KEGG: 00903+4.2.1.17|KEGG: 00930+4.2.1.17+1.1.1.35|MetaCyc: PWY-1361|MetaCyc: PWY-5109|MetaCyc: PWY-5136|MetaCyc: PWY-5138|MetaCyc: PWY-5177|MetaCyc: PWY-5789|MetaCyc: PWY-6435|MetaCyc: PWY-6583|MetaCyc: PWY-6863|MetaCyc: PWY-6883|MetaCyc: PWY-6944|MetaCyc: PWY-6945|MetaCyc: PWY-6946|MetaCyc: PWY-7007|MetaCyc: PWY-7046|MetaCyc: PWY-7094|MetaCyc: PWY-7216|MetaCyc: PWY-735|MetaCyc: PWY-7401|MetaCyc: PWY-7606|MetaCyc: PWY-7654|MetaCyc: PWY-7656|MetaCyc: PWY-7726|MetaCyc: PWY-7778|MetaCyc: PWY-7779 CDA09_01680 54eb361140d73f52bb173a232f9009a8 510 SUPERFAMILY SSF48179 189 290 5.27E-29 T 01-11-2018 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily GO:0055114 CDA09_01680 54eb361140d73f52bb173a232f9009a8 510 Gene3D G3DSA:1.10.1040.50 193 502 7.3E-91 T 01-11-2018 CDA09_01680 54eb361140d73f52bb173a232f9009a8 510 SUPERFAMILY SSF48179 421 505 1.02E-18 T 01-11-2018 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily GO:0055114 CDA09_00675 dbbd38b5454b82d826e38ee942e925f6 161 SUPERFAMILY SSF103088 61 160 3.66E-16 T 01-11-2018 IPR036737 OmpA-like domain superfamily CDA09_00675 dbbd38b5454b82d826e38ee942e925f6 161 Gene3D G3DSA:3.30.1330.60 39 161 1.5E-13 T 01-11-2018 IPR036737 OmpA-like domain superfamily CDA09_00675 dbbd38b5454b82d826e38ee942e925f6 161 Pfam PF00691 OmpA family 65 137 9.7E-11 T 01-11-2018 IPR006665 OmpA-like domain CDA09_00925 937d8d7e24fbb28203a991dc60bc5f3d 343 SUPERFAMILY SSF56935 33 343 1.57E-42 T 01-11-2018 CDA09_00925 937d8d7e24fbb28203a991dc60bc5f3d 343 Pfam PF13609 Gram-negative porin 17 316 1.6E-30 T 01-11-2018 CDA09_00925 937d8d7e24fbb28203a991dc60bc5f3d 343 Gene3D G3DSA:2.40.160.10 32 343 3.8E-48 T 01-11-2018 IPR023614 Porin domain superfamily CDA09_16450 3675da5369fab951247edd42fade0b05 377 Gene3D G3DSA:3.30.360.10 141 358 2.8E-82 T 01-11-2018 CDA09_16450 3675da5369fab951247edd42fade0b05 377 ProSitePatterns PS01103 Aspartate-semialdehyde dehydrogenase signature. 269 283 - T 01-11-2018 IPR000319 Aspartate-semialdehyde dehydrogenase, conserved site GO:0004073|GO:0006520|GO:0050661|GO:0055114 KEGG: 00260+1.2.1.11|KEGG: 00261+1.2.1.11|KEGG: 00270+1.2.1.11|KEGG: 00300+1.2.1.11|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|MetaCyc: PWY-6160|MetaCyc: PWY-6559|MetaCyc: PWY-6562|MetaCyc: PWY-7153|MetaCyc: PWY-7977 CDA09_16450 3675da5369fab951247edd42fade0b05 377 TIGRFAM TIGR01745 asd_gamma: aspartate-semialdehyde dehydrogenase 3 375 7.0E-190 T 01-11-2018 IPR011534 Aspartate-semialdehyde dehydrogenase, gamma-type GO:0004073|GO:0009086|GO:0009088|GO:0009089|GO:0009097|GO:0050661|GO:0055114 KEGG: 00260+1.2.1.11|KEGG: 00261+1.2.1.11|KEGG: 00270+1.2.1.11|KEGG: 00300+1.2.1.11|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|MetaCyc: PWY-6160|MetaCyc: PWY-6559|MetaCyc: PWY-6562|MetaCyc: PWY-7153|MetaCyc: PWY-7977 CDA09_16450 3675da5369fab951247edd42fade0b05 377 Gene3D G3DSA:3.40.50.720 1 140 2.2E-56 T 01-11-2018 CDA09_16450 3675da5369fab951247edd42fade0b05 377 SMART SM00859 3 124 1.2E-30 T 01-11-2018 IPR000534 Semialdehyde dehydrogenase, NAD-binding GO:0016620|GO:0051287|GO:0055114 CDA09_16450 3675da5369fab951247edd42fade0b05 377 Hamap MF_02121 Aspartate-semialdehyde dehydrogenase [asd]. 1 375 33.372 T 01-11-2018 IPR012080 Aspartate-semialdehyde dehydrogenase GO:0004073|GO:0009086|GO:0009088|GO:0009089|GO:0009097|GO:0050661 KEGG: 00260+1.2.1.11|KEGG: 00261+1.2.1.11|KEGG: 00270+1.2.1.11|KEGG: 00300+1.2.1.11|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|MetaCyc: PWY-6160|MetaCyc: PWY-6559|MetaCyc: PWY-6562|MetaCyc: PWY-7153|MetaCyc: PWY-7977 CDA09_16450 3675da5369fab951247edd42fade0b05 377 SUPERFAMILY SSF51735 1 149 2.35E-51 T 01-11-2018 IPR036291 NAD(P)-binding domain superfamily CDA09_16450 3675da5369fab951247edd42fade0b05 377 SUPERFAMILY SSF55347 136 362 4.76E-73 T 01-11-2018 CDA09_16450 3675da5369fab951247edd42fade0b05 377 Pfam PF01118 Semialdehyde dehydrogenase, NAD binding domain 3 123 3.9E-25 T 01-11-2018 IPR000534 Semialdehyde dehydrogenase, NAD-binding GO:0016620|GO:0051287|GO:0055114 CDA09_16450 3675da5369fab951247edd42fade0b05 377 PIRSF PIRSF000148 1 377 3.8E-60 T 01-11-2018 CDA09_16450 3675da5369fab951247edd42fade0b05 377 Pfam PF02774 Semialdehyde dehydrogenase, dimerisation domain 146 361 7.7E-51 T 01-11-2018 IPR012280 Semialdehyde dehydrogenase, dimerisation domain GO:0005737|GO:0008652|GO:0016620|GO:0046983 KEGG: 00220+1.2.1.38|MetaCyc: PWY-5154|MetaCyc: PWY-7400 CDA09_20160 5b4283dfc2a58ad02f028098fe5d68d0 385 Gene3D G3DSA:3.30.1490.100 262 368 2.3E-26 T 01-11-2018 IPR036775 DNA polymerase, Y-family, little finger domain superfamily GO:0003684|GO:0006281 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7|Reactome: R-HSA-5656169 CDA09_20160 5b4283dfc2a58ad02f028098fe5d68d0 385 Gene3D G3DSA:1.10.150.20 192 258 1.0E-19 T 01-11-2018 CDA09_20160 5b4283dfc2a58ad02f028098fe5d68d0 385 Pfam PF11798 IMS family HHH motif 188 218 6.4E-6 T 01-11-2018 IPR024728 DNA polymerase type-Y, HhH motif KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7|Reactome: R-HSA-5655862|Reactome: R-HSA-5656169|Reactome: R-HSA-5685942|Reactome: R-HSA-5696397|Reactome: R-HSA-5696400|Reactome: R-HSA-6782135|Reactome: R-HSA-6782210 CDA09_20160 5b4283dfc2a58ad02f028098fe5d68d0 385 Gene3D G3DSA:3.30.70.270 11 185 2.9E-46 T 01-11-2018 CDA09_20160 5b4283dfc2a58ad02f028098fe5d68d0 385 Pfam PF00817 impB/mucB/samB family 14 175 1.2E-37 T 01-11-2018 IPR001126 UmuC domain GO:0006281 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7|Reactome: R-HSA-5656169 CDA09_20160 5b4283dfc2a58ad02f028098fe5d68d0 385 Gene3D G3DSA:2.30.40.20 28 97 2.9E-46 T 01-11-2018 CDA09_20160 5b4283dfc2a58ad02f028098fe5d68d0 385 Hamap MF_01113 DNA polymerase IV [dinB]. 8 383 32.597 T 01-11-2018 IPR022880 DNA polymerase IV GO:0003887 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7|Reactome: R-HSA-5655862|Reactome: R-HSA-5656169|Reactome: R-HSA-5685942|Reactome: R-HSA-5696397|Reactome: R-HSA-5696400|Reactome: R-HSA-6782135|Reactome: R-HSA-6782210 CDA09_20160 5b4283dfc2a58ad02f028098fe5d68d0 385 Pfam PF11799 impB/mucB/samB family C-terminal domain 256 368 9.1E-22 T 01-11-2018 IPR017961 DNA polymerase, Y-family, little finger domain GO:0003684|GO:0006281 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7|Reactome: R-HSA-5656169 CDA09_20160 5b4283dfc2a58ad02f028098fe5d68d0 385 SUPERFAMILY SSF100879 263 368 3.92E-27 T 01-11-2018 IPR036775 DNA polymerase, Y-family, little finger domain superfamily GO:0003684|GO:0006281 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7|Reactome: R-HSA-5656169 CDA09_20160 5b4283dfc2a58ad02f028098fe5d68d0 385 SUPERFAMILY SSF56672 4 256 1.87E-73 T 01-11-2018 CDA09_04515 e97c693fe7dd8657e44643b77e7e92e4 379 Gene3D G3DSA:3.20.20.70 14 291 1.6E-46 T 01-11-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 CDA09_04515 e97c693fe7dd8657e44643b77e7e92e4 379 PIRSF PIRSF037420 5 361 1.6E-107 T 01-11-2018 IPR017200 Coenzyme PQQ synthesis protein E CDA09_04515 e97c693fe7dd8657e44643b77e7e92e4 379 Pfam PF04055 Radical SAM superfamily 24 178 6.7E-23 T 01-11-2018 IPR007197 Radical SAM GO:0003824|GO:0051536 CDA09_04515 e97c693fe7dd8657e44643b77e7e92e4 379 Pfam PF13394 4Fe-4S single cluster domain 26 82 4.2E-6 T 01-11-2018 CDA09_04515 e97c693fe7dd8657e44643b77e7e92e4 379 SMART SM00729 17 220 0.0018 T 01-11-2018 IPR006638 Elp3/MiaB/NifB GO:0003824|GO:0051536 CDA09_04515 e97c693fe7dd8657e44643b77e7e92e4 379 Hamap MF_00660 Coenzyme PQQ synthesis protein E [pqqE]. 1 379 163.706 T 01-11-2018 IPR011843 Coenzyme PQQ biosynthesis protein E, bacteria GO:0018189|GO:0051539 CDA09_04515 e97c693fe7dd8657e44643b77e7e92e4 379 SUPERFAMILY SSF102114 15 322 5.76E-71 T 01-11-2018 CDA09_04515 e97c693fe7dd8657e44643b77e7e92e4 379 Pfam PF13186 Iron-sulfur cluster-binding domain 247 312 1.4E-7 T 01-11-2018 IPR023885 4Fe4S-binding SPASM domain CDA09_04515 e97c693fe7dd8657e44643b77e7e92e4 379 TIGRFAM TIGR04085 rSAM_more_4Fe4S: radical SAM additional 4Fe4S-binding SPASM domain 254 340 9.4E-8 T 01-11-2018 IPR023885 4Fe4S-binding SPASM domain CDA09_04515 e97c693fe7dd8657e44643b77e7e92e4 379 TIGRFAM TIGR02109 PQQ_syn_pqqE: coenzyme PQQ biosynthesis enzyme PqqE 14 361 3.0E-154 T 01-11-2018 IPR011843 Coenzyme PQQ biosynthesis protein E, bacteria GO:0018189|GO:0051539 CDA09_02525 66c439c191ff9c0acbb554f27211fc90 253 Pfam PF01522 Polysaccharide deacetylase 63 196 1.1E-30 T 01-11-2018 IPR002509 NodB homology domain GO:0005975|GO:0016810 CDA09_02525 66c439c191ff9c0acbb554f27211fc90 253 SUPERFAMILY SSF88713 23 208 1.88E-41 T 01-11-2018 IPR011330 Glycoside hydrolase/deacetylase, beta/alpha-barrel GO:0003824|GO:0005975 CDA09_02525 66c439c191ff9c0acbb554f27211fc90 253 Gene3D G3DSA:3.20.20.370 1 233 1.1E-63 T 01-11-2018 CDA09_06310 8785686826ad976b544d7b61b81257fb 465 Gene3D G3DSA:3.30.565.10 310 456 9.6E-34 T 01-11-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily CDA09_06310 8785686826ad976b544d7b61b81257fb 465 SUPERFAMILY SSF55874 295 454 1.1E-35 T 01-11-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily CDA09_06310 8785686826ad976b544d7b61b81257fb 465 Gene3D G3DSA:1.10.287.130 245 305 3.6E-5 T 01-11-2018 CDA09_06310 8785686826ad976b544d7b61b81257fb 465 SMART SM00387 348 456 1.1E-28 T 01-11-2018 IPR003594 Histidine kinase/HSP90-like ATPase CDA09_06310 8785686826ad976b544d7b61b81257fb 465 SMART SM00304 184 237 2.7E-6 T 01-11-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 CDA09_06310 8785686826ad976b544d7b61b81257fb 465 PRINTS PR00344 Bacterial sensor protein C-terminal signature 383 397 8.0E-11 T 01-11-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 CDA09_06310 8785686826ad976b544d7b61b81257fb 465 PRINTS PR00344 Bacterial sensor protein C-terminal signature 401 411 8.0E-11 T 01-11-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 CDA09_06310 8785686826ad976b544d7b61b81257fb 465 PRINTS PR00344 Bacterial sensor protein C-terminal signature 417 435 8.0E-11 T 01-11-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 CDA09_06310 8785686826ad976b544d7b61b81257fb 465 SUPERFAMILY SSF47384 221 304 9.61E-11 T 01-11-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 CDA09_06310 8785686826ad976b544d7b61b81257fb 465 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 348 453 7.2E-17 T 01-11-2018 IPR003594 Histidine kinase/HSP90-like ATPase CDA09_06310 8785686826ad976b544d7b61b81257fb 465 Gene3D G3DSA:1.20.1480.50 152 244 2.6E-7 T 01-11-2018 CDA09_06310 8785686826ad976b544d7b61b81257fb 465 SUPERFAMILY SSF158472 186 236 8.11E-6 T 01-11-2018 CDA09_06310 8785686826ad976b544d7b61b81257fb 465 Pfam PF00672 HAMP domain 186 234 1.0E-6 T 01-11-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 CDA09_17235 1493f59350b547ed447eeda8070d6e70 627 ProSitePatterns PS00058 DNA mismatch repair proteins mutL / hexB / PMS1 signature. 94 100 - T 01-11-2018 IPR014762 DNA mismatch repair, conserved site CDA09_17235 1493f59350b547ed447eeda8070d6e70 627 Pfam PF08676 MutL C terminal dimerisation domain 437 583 2.3E-48 T 01-11-2018 IPR014790 MutL, C-terminal, dimerisation GO:0005524|GO:0006298 CDA09_17235 1493f59350b547ed447eeda8070d6e70 627 Pfam PF13589 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 25 125 1.7E-11 T 01-11-2018 CDA09_17235 1493f59350b547ed447eeda8070d6e70 627 SUPERFAMILY SSF118116 437 625 2.48E-59 T 01-11-2018 IPR037198 MutL, C-terminal domain superfamily CDA09_17235 1493f59350b547ed447eeda8070d6e70 627 TIGRFAM TIGR00585 mutl: DNA mismatch repair protein MutL 4 303 2.8E-86 T 01-11-2018 IPR002099 DNA mismatch repair protein family, N-terminal GO:0005524|GO:0006298|GO:0030983 CDA09_17235 1493f59350b547ed447eeda8070d6e70 627 SMART SM01340 205 323 4.4E-59 T 01-11-2018 IPR013507 DNA mismatch repair protein, S5 domain 2-like GO:0005524|GO:0006298|GO:0030983 CDA09_17235 1493f59350b547ed447eeda8070d6e70 627 Pfam PF01119 DNA mismatch repair protein, C-terminal domain 206 322 3.7E-37 T 01-11-2018 IPR013507 DNA mismatch repair protein, S5 domain 2-like GO:0005524|GO:0006298|GO:0030983 CDA09_17235 1493f59350b547ed447eeda8070d6e70 627 SUPERFAMILY SSF54211 188 323 5.31E-37 T 01-11-2018 IPR020568 Ribosomal protein S5 domain 2-type fold CDA09_17235 1493f59350b547ed447eeda8070d6e70 627 Gene3D G3DSA:2.30.42.20 443 620 2.3E-58 T 01-11-2018 CDA09_17235 1493f59350b547ed447eeda8070d6e70 627 SMART SM00853 441 583 6.6E-56 T 01-11-2018 IPR014790 MutL, C-terminal, dimerisation GO:0005524|GO:0006298 CDA09_17235 1493f59350b547ed447eeda8070d6e70 627 Gene3D G3DSA:3.30.1370.100 483 578 2.3E-58 T 01-11-2018 CDA09_17235 1493f59350b547ed447eeda8070d6e70 627 SUPERFAMILY SSF55874 2 203 8.91E-51 T 01-11-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily CDA09_17235 1493f59350b547ed447eeda8070d6e70 627 Hamap MF_00149 DNA mismatch repair protein MutL [mutL]. 2 623 27.694 T 01-11-2018 IPR020667 DNA mismatch repair protein, MutL GO:0006298 CDA09_17235 1493f59350b547ed447eeda8070d6e70 627 Gene3D G3DSA:3.30.565.10 2 209 5.7E-59 T 01-11-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily CDA09_17235 1493f59350b547ed447eeda8070d6e70 627 Gene3D G3DSA:3.30.230.10 210 322 8.7E-37 T 01-11-2018 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup CDA09_00990 c9b55ebe98fbe4ea002dbdaaf1657d62 396 Gene3D G3DSA:1.20.81.30 57 165 2.0E-24 T 01-11-2018 CDA09_00990 c9b55ebe98fbe4ea002dbdaaf1657d62 396 Pfam PF00482 Type II secretion system (T2SS), protein F 63 186 1.4E-27 T 01-11-2018 IPR018076 Type II secretion system F domain CDA09_00990 c9b55ebe98fbe4ea002dbdaaf1657d62 396 Pfam PF00482 Type II secretion system (T2SS), protein F 266 387 4.5E-26 T 01-11-2018 IPR018076 Type II secretion system F domain CDA09_00990 c9b55ebe98fbe4ea002dbdaaf1657d62 396 PRINTS PR00812 Bacterial general secretion pathway protein F signature 158 186 3.4E-19 T 01-11-2018 IPR003004 GspF/PilC family CDA09_00990 c9b55ebe98fbe4ea002dbdaaf1657d62 396 PRINTS PR00812 Bacterial general secretion pathway protein F signature 59 71 3.4E-19 T 01-11-2018 IPR003004 GspF/PilC family CDA09_00990 c9b55ebe98fbe4ea002dbdaaf1657d62 396 PRINTS PR00812 Bacterial general secretion pathway protein F signature 376 395 3.4E-19 T 01-11-2018 IPR003004 GspF/PilC family CDA09_00990 c9b55ebe98fbe4ea002dbdaaf1657d62 396 PRINTS PR00812 Bacterial general secretion pathway protein F signature 360 374 3.4E-19 T 01-11-2018 IPR003004 GspF/PilC family CDA09_00990 c9b55ebe98fbe4ea002dbdaaf1657d62 396 Gene3D G3DSA:1.20.81.30 250 356 9.5E-22 T 01-11-2018 CDA09_11270 2bb9dc00c083c43a37a91fa1b1db70b1 341 ProSitePatterns PS00211 ABC transporters family signature. 142 156 - T 01-11-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 CDA09_11270 2bb9dc00c083c43a37a91fa1b1db70b1 341 Gene3D G3DSA:3.30.70.260 260 341 1.7E-11 T 01-11-2018 CDA09_11270 2bb9dc00c083c43a37a91fa1b1db70b1 341 Pfam PF00005 ABC transporter 21 170 1.5E-36 T 01-11-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 CDA09_11270 2bb9dc00c083c43a37a91fa1b1db70b1 341 SMART SM00382 30 218 7.6E-18 T 01-11-2018 IPR003593 AAA+ ATPase domain CDA09_11270 2bb9dc00c083c43a37a91fa1b1db70b1 341 SUPERFAMILY SSF55021 266 340 6.98E-16 T 01-11-2018 CDA09_11270 2bb9dc00c083c43a37a91fa1b1db70b1 341 Gene3D G3DSA:3.40.50.300 1 259 3.9E-84 T 01-11-2018 CDA09_11270 2bb9dc00c083c43a37a91fa1b1db70b1 341 SMART SM00930 265 340 1.2E-16 T 01-11-2018 IPR018449 NIL domain CDA09_11270 2bb9dc00c083c43a37a91fa1b1db70b1 341 Pfam PF09383 NIL domain 267 339 1.1E-16 T 01-11-2018 IPR018449 NIL domain CDA09_11270 2bb9dc00c083c43a37a91fa1b1db70b1 341 SUPERFAMILY SSF52540 1 239 7.41E-82 T 01-11-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CDA09_09265 774a45105564528281b9297d6cc1960a 388 Gene3D G3DSA:3.40.47.10 1 388 1.5E-102 T 01-11-2018 IPR016039 Thiolase-like GO:0003824 CDA09_09265 774a45105564528281b9297d6cc1960a 388 PIRSF PIRSF000429 1 380 1.5E-22 T 01-11-2018 IPR002155 Thiolase GO:0016747 CDA09_09265 774a45105564528281b9297d6cc1960a 388 SUPERFAMILY SSF53901 247 374 8.65E-21 T 01-11-2018 IPR016039 Thiolase-like GO:0003824 CDA09_09265 774a45105564528281b9297d6cc1960a 388 SUPERFAMILY SSF53901 8 228 3.62E-24 T 01-11-2018 IPR016039 Thiolase-like GO:0003824 CDA09_22775 f4f0e54468814b31676eb06813822ed8 232 SUPERFAMILY SSF53474 11 181 2.49E-24 T 01-11-2018 IPR029058 Alpha/Beta hydrolase fold CDA09_22775 f4f0e54468814b31676eb06813822ed8 232 Pfam PF12697 Alpha/beta hydrolase family 17 140 1.3E-8 T 01-11-2018 IPR000073 Alpha/beta hydrolase fold-1 CDA09_22775 f4f0e54468814b31676eb06813822ed8 232 Gene3D G3DSA:3.40.50.1820 17 218 1.7E-28 T 01-11-2018 IPR029058 Alpha/Beta hydrolase fold CDA09_12775 26c7d18922c307d57a09856bc976163f 267 Gene3D G3DSA:3.90.226.10 12 209 4.3E-64 T 01-11-2018 CDA09_12775 26c7d18922c307d57a09856bc976163f 267 ProSitePatterns PS00166 Enoyl-CoA hydratase/isomerase signature. 109 129 - T 01-11-2018 IPR018376 Enoyl-CoA hydratase/isomerase, conserved site GO:0003824 CDA09_12775 26c7d18922c307d57a09856bc976163f 267 Pfam PF00378 Enoyl-CoA hydratase/isomerase 19 266 6.6E-57 T 01-11-2018 IPR001753 Enoyl-CoA hydratase/isomerase GO:0003824 CDA09_12775 26c7d18922c307d57a09856bc976163f 267 Gene3D G3DSA:1.10.12.10 211 267 9.2E-26 T 01-11-2018 IPR014748 Enoyl-CoA hydratase, C-terminal CDA09_12775 26c7d18922c307d57a09856bc976163f 267 SUPERFAMILY SSF52096 12 267 4.2E-82 T 01-11-2018 IPR029045 ClpP/crotonase-like domain superfamily CDA09_00255 c512e0722ac4131778b3f74b789b5bec 386 SUPERFAMILY SSF47781 3 57 4.13E-5 T 01-11-2018 IPR010994 RuvA domain 2-like CDA09_00255 c512e0722ac4131778b3f74b789b5bec 386 TIGRFAM TIGR00732 dprA: DNA protecting protein DprA 69 287 1.5E-74 T 01-11-2018 IPR003488 DNA recombination-mediator protein A GO:0009294 CDA09_00255 c512e0722ac4131778b3f74b789b5bec 386 Gene3D G3DSA:3.40.50.450 1 289 2.8E-105 T 01-11-2018 CDA09_00255 c512e0722ac4131778b3f74b789b5bec 386 SUPERFAMILY SSF102405 80 287 9.52E-44 T 01-11-2018 CDA09_00255 c512e0722ac4131778b3f74b789b5bec 386 Gene3D G3DSA:1.10.10.10 312 384 3.6E-13 T 01-11-2018 IPR036388 Winged helix-like DNA-binding domain superfamily CDA09_00255 c512e0722ac4131778b3f74b789b5bec 386 Pfam PF02481 DNA recombination-mediator protein A 73 278 6.2E-76 T 01-11-2018 IPR003488 DNA recombination-mediator protein A GO:0009294 CDA09_03645 9f5dbfb85dacce5ec3608432068ed4bb 159 Pfam PF04965 Gene 25-like lysozyme 29 129 1.8E-20 T 01-11-2018 IPR007048 GpW/Gp25/anti-adapter protein IraD CDA09_03645 9f5dbfb85dacce5ec3608432068ed4bb 159 TIGRFAM TIGR03357 VI_zyme: type VI secretion system lysozyme-like protein 6 147 4.9E-35 T 01-11-2018 IPR017737 Type VI secretion system, lysozyme-related protein CDA09_03645 9f5dbfb85dacce5ec3608432068ed4bb 159 SUPERFAMILY SSF160719 30 142 1.12E-11 T 01-11-2018 CDA09_17765 ca6d04fc28566bfd6f833732861fb7a7 282 Pfam PF00140 Sigma-70 factor, region 1.2 15 45 2.1E-7 T 01-11-2018 IPR009042 RNA polymerase sigma-70 region 1.2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 CDA09_17765 ca6d04fc28566bfd6f833732861fb7a7 282 SUPERFAMILY SSF88946 13 122 2.35E-41 T 01-11-2018 IPR013325 RNA polymerase sigma factor, region 2 GO:0003700|GO:0006352|GO:0006355 CDA09_17765 ca6d04fc28566bfd6f833732861fb7a7 282 Pfam PF04545 Sigma-70, region 4 226 277 4.3E-17 T 01-11-2018 IPR007630 RNA polymerase sigma-70 region 4 GO:0003700|GO:0006352|GO:0006355 CDA09_17765 ca6d04fc28566bfd6f833732861fb7a7 282 SUPERFAMILY SSF88659 188 280 1.53E-18 T 01-11-2018 IPR013324 RNA polymerase sigma factor, region 3/4-like CDA09_17765 ca6d04fc28566bfd6f833732861fb7a7 282 ProSitePatterns PS00716 Sigma-70 factors family signature 2. 250 276 - T 01-11-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 CDA09_17765 ca6d04fc28566bfd6f833732861fb7a7 282 PIRSF PIRSF000770 12 281 1.5E-32 T 01-11-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 CDA09_17765 ca6d04fc28566bfd6f833732861fb7a7 282 Gene3D G3DSA:1.10.601.10 9 122 3.8E-29 T 01-11-2018 CDA09_17765 ca6d04fc28566bfd6f833732861fb7a7 282 Pfam PF04542 Sigma-70 region 2 53 122 2.6E-18 T 01-11-2018 IPR007627 RNA polymerase sigma-70 region 2 GO:0003700|GO:0006352|GO:0006355 CDA09_17765 ca6d04fc28566bfd6f833732861fb7a7 282 ProSitePatterns PS00715 Sigma-70 factors family signature 1. 77 90 - T 01-11-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 CDA09_17765 ca6d04fc28566bfd6f833732861fb7a7 282 Hamap MF_00961 RNA polymerase sigma factor RpoH [rpoH]. 1 282 50.898 T 01-11-2018 IPR012759 RNA polymerase sigma factor RpoH, proteobacteria GO:0003700|GO:0006352|GO:0006355|GO:0016987 CDA09_17765 ca6d04fc28566bfd6f833732861fb7a7 282 TIGRFAM TIGR02392 rpoH_proteo: alternative sigma factor RpoH 14 280 1.1E-121 T 01-11-2018 IPR012759 RNA polymerase sigma factor RpoH, proteobacteria GO:0003700|GO:0006352|GO:0006355|GO:0016987 CDA09_17765 ca6d04fc28566bfd6f833732861fb7a7 282 PRINTS PR00046 Major sigma-70 factor signature 250 265 4.2E-20 T 01-11-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 CDA09_17765 ca6d04fc28566bfd6f833732861fb7a7 282 PRINTS PR00046 Major sigma-70 factor signature 265 276 4.2E-20 T 01-11-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 CDA09_17765 ca6d04fc28566bfd6f833732861fb7a7 282 PRINTS PR00046 Major sigma-70 factor signature 230 242 4.2E-20 T 01-11-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 CDA09_17765 ca6d04fc28566bfd6f833732861fb7a7 282 PRINTS PR00046 Major sigma-70 factor signature 77 90 4.2E-20 T 01-11-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 CDA09_17765 ca6d04fc28566bfd6f833732861fb7a7 282 Gene3D G3DSA:1.20.140.160 140 281 5.5E-17 T 01-11-2018 CDA09_17765 ca6d04fc28566bfd6f833732861fb7a7 282 TIGRFAM TIGR02937 sigma70-ECF: RNA polymerase sigma factor, sigma-70 family 48 278 5.8E-32 T 01-11-2018 IPR014284 RNA polymerase sigma-70 like domain GO:0003700|GO:0006352|GO:0006355 CDA09_05420 8096d533194c6b12b99b0364cde4b23d 365 Gene3D G3DSA:2.30.30.280 211 285 1.5E-25 T 01-11-2018 IPR023382 Adenine nucleotide alpha hydrolase-like domains GO:0016783 MetaCyc: PWY-7887|MetaCyc: PWY-7892|Reactome: R-HSA-6787450 CDA09_05420 8096d533194c6b12b99b0364cde4b23d 365 Hamap MF_00144 tRNA-specific 2-thiouridylase MnmA [mnmA]. 1 365 38.697 T 01-11-2018 IPR004506 tRNA-specific 2-thiouridylase GO:0008033|GO:0016740 MetaCyc: PWY-7887|MetaCyc: PWY-7892|Reactome: R-HSA-6787450 CDA09_05420 8096d533194c6b12b99b0364cde4b23d 365 Gene3D G3DSA:3.40.50.620 1 210 6.0E-90 T 01-11-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold CDA09_05420 8096d533194c6b12b99b0364cde4b23d 365 TIGRFAM TIGR00420 trmU: tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase 1 364 7.7E-132 T 01-11-2018 IPR004506 tRNA-specific 2-thiouridylase GO:0008033|GO:0016740 MetaCyc: PWY-7887|MetaCyc: PWY-7892|Reactome: R-HSA-6787450 CDA09_05420 8096d533194c6b12b99b0364cde4b23d 365 Pfam PF03054 tRNA methyl transferase 1 364 9.2E-134 T 01-11-2018 CDA09_05420 8096d533194c6b12b99b0364cde4b23d 365 Gene3D G3DSA:2.40.30.10 286 365 6.9E-24 T 01-11-2018 CDA09_05420 8096d533194c6b12b99b0364cde4b23d 365 SUPERFAMILY SSF52402 1 243 2.07E-57 T 01-11-2018 CDA09_15875 8e535bbb4a55340d529249246e202a94 904 Gene3D G3DSA:3.30.499.20 6 373 8.0E-155 T 01-11-2018 CDA09_15875 8e535bbb4a55340d529249246e202a94 904 TIGRFAM TIGR01341 aconitase_1: aconitate hydratase 1 21 900 0.0 T 01-11-2018 IPR006249 Aconitase/Iron-responsive element-binding protein 2 KEGG: 00020+4.2.1.3|KEGG: 00630+4.2.1.3|KEGG: 00720+4.2.1.3|Reactome: R-HSA-917937 CDA09_15875 8e535bbb4a55340d529249246e202a94 904 SUPERFAMILY SSF52016 640 900 2.55E-79 T 01-11-2018 CDA09_15875 8e535bbb4a55340d529249246e202a94 904 ProSitePatterns PS01244 Aconitase family signature 2. 498 511 - T 01-11-2018 IPR018136 Aconitase family, 4Fe-4S cluster binding site KEGG: 00290+4.2.1.33 CDA09_15875 8e535bbb4a55340d529249246e202a94 904 PRINTS PR00415 Aconitase family signature 170 178 1.6E-41 T 01-11-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain KEGG: 00290+4.2.1.33 CDA09_15875 8e535bbb4a55340d529249246e202a94 904 PRINTS PR00415 Aconitase family signature 436 447 1.6E-41 T 01-11-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain KEGG: 00290+4.2.1.33 CDA09_15875 8e535bbb4a55340d529249246e202a94 904 PRINTS PR00415 Aconitase family signature 498 511 1.6E-41 T 01-11-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain KEGG: 00290+4.2.1.33 CDA09_15875 8e535bbb4a55340d529249246e202a94 904 PRINTS PR00415 Aconitase family signature 146 159 1.6E-41 T 01-11-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain KEGG: 00290+4.2.1.33 CDA09_15875 8e535bbb4a55340d529249246e202a94 904 PRINTS PR00415 Aconitase family signature 203 216 1.6E-41 T 01-11-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain KEGG: 00290+4.2.1.33 CDA09_15875 8e535bbb4a55340d529249246e202a94 904 PRINTS PR00415 Aconitase family signature 279 292 1.6E-41 T 01-11-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain KEGG: 00290+4.2.1.33 CDA09_15875 8e535bbb4a55340d529249246e202a94 904 PRINTS PR00415 Aconitase family signature 373 387 1.6E-41 T 01-11-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain KEGG: 00290+4.2.1.33 CDA09_15875 8e535bbb4a55340d529249246e202a94 904 PRINTS PR00415 Aconitase family signature 293 306 1.6E-41 T 01-11-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain KEGG: 00290+4.2.1.33 CDA09_15875 8e535bbb4a55340d529249246e202a94 904 PRINTS PR00415 Aconitase family signature 217 232 1.6E-41 T 01-11-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain KEGG: 00290+4.2.1.33 CDA09_15875 8e535bbb4a55340d529249246e202a94 904 ProSitePatterns PS00450 Aconitase family signature 1. 432 448 - T 01-11-2018 IPR018136 Aconitase family, 4Fe-4S cluster binding site KEGG: 00290+4.2.1.33 CDA09_15875 8e535bbb4a55340d529249246e202a94 904 Gene3D G3DSA:3.20.19.10 658 901 3.3E-98 T 01-11-2018 IPR015928 Aconitase/3-isopropylmalate dehydratase, swivel KEGG: 00290+4.2.1.33 CDA09_15875 8e535bbb4a55340d529249246e202a94 904 Gene3D G3DSA:3.30.499.10 374 595 1.0E-92 T 01-11-2018 IPR015931 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha, subdomain 1/3 KEGG: 00290+4.2.1.33 CDA09_15875 8e535bbb4a55340d529249246e202a94 904 Pfam PF00330 Aconitase family (aconitate hydratase) 69 567 2.0E-175 T 01-11-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain KEGG: 00290+4.2.1.33 CDA09_15875 8e535bbb4a55340d529249246e202a94 904 SUPERFAMILY SSF53732 12 631 2.09E-210 T 01-11-2018 IPR036008 Aconitase, iron-sulfur domain KEGG: 00290+4.2.1.33 CDA09_15875 8e535bbb4a55340d529249246e202a94 904 Pfam PF00694 Aconitase C-terminal domain 697 826 5.5E-37 T 01-11-2018 IPR000573 Aconitase A/isopropylmalate dehydratase small subunit, swivel domain KEGG: 00290+4.2.1.33 CDA09_15875 8e535bbb4a55340d529249246e202a94 904 Gene3D G3DSA:1.10.1440.20 596 655 5.6E-13 T 01-11-2018 CDA09_20340 8b1c27bcaf3c8167b74dabd2229314f1 222 Pfam PF04350 Pilus assembly protein, PilO 61 202 1.0E-52 T 01-11-2018 IPR007445 Pilus assembly protein, PilO CDA09_20340 8b1c27bcaf3c8167b74dabd2229314f1 222 Gene3D G3DSA:1.10.287.540 69 105 9.5E-10 T 01-11-2018 CDA09_20340 8b1c27bcaf3c8167b74dabd2229314f1 222 Gene3D G3DSA:3.30.70.60 106 212 3.1E-32 T 01-11-2018 IPR014717 Translation elongation factor EF1B/ribosomal protein S6 CDA09_20340 8b1c27bcaf3c8167b74dabd2229314f1 222 PIRSF PIRSF016482 10 219 3.3E-58 T 01-11-2018 IPR007445 Pilus assembly protein, PilO CDA09_14640 9b59d58a764f9a6a053dc8ee402b91be 155 Gene3D G3DSA:2.30.110.10 9 145 2.7E-7 T 01-11-2018 IPR012349 FMN-binding split barrel GO:0048037 CDA09_14640 9b59d58a764f9a6a053dc8ee402b91be 155 SUPERFAMILY SSF50475 11 94 2.06E-12 T 01-11-2018 CDA09_14640 9b59d58a764f9a6a053dc8ee402b91be 155 Pfam PF01243 Pyridoxamine 5'-phosphate oxidase 25 93 9.4E-5 T 01-11-2018 IPR011576 Pyridoxamine 5'-phosphate oxidase, putative KEGG: 00750+1.4.3.5|MetaCyc: PWY-7204|MetaCyc: PWY-7282|Reactome: R-HSA-964975 CDA09_17755 adc3e583377a3e0e542b85acb3394ebb 371 PRINTS PR00184 Neisseria sp. porin signature 204 221 3.1E-8 T 01-11-2018 IPR002299 Porin, Neisseria sp. type GO:0015288|GO:0016020|GO:0055085 CDA09_17755 adc3e583377a3e0e542b85acb3394ebb 371 PRINTS PR00184 Neisseria sp. porin signature 304 328 3.1E-8 T 01-11-2018 IPR002299 Porin, Neisseria sp. type GO:0015288|GO:0016020|GO:0055085 CDA09_17755 adc3e583377a3e0e542b85acb3394ebb 371 PRINTS PR00184 Neisseria sp. porin signature 52 77 3.1E-8 T 01-11-2018 IPR002299 Porin, Neisseria sp. type GO:0015288|GO:0016020|GO:0055085 CDA09_17755 adc3e583377a3e0e542b85acb3394ebb 371 PRINTS PR00182 E.coli/Neisseria porin superfamily signature 50 61 3.1E-8 T 01-11-2018 IPR001702 Porin, Gram-negative type GO:0015288|GO:0016020|GO:0055085 CDA09_17755 adc3e583377a3e0e542b85acb3394ebb 371 PRINTS PR00182 E.coli/Neisseria porin superfamily signature 158 169 3.1E-8 T 01-11-2018 IPR001702 Porin, Gram-negative type GO:0015288|GO:0016020|GO:0055085 CDA09_17755 adc3e583377a3e0e542b85acb3394ebb 371 PRINTS PR00182 E.coli/Neisseria porin superfamily signature 95 105 3.1E-8 T 01-11-2018 IPR001702 Porin, Gram-negative type GO:0015288|GO:0016020|GO:0055085 CDA09_17755 adc3e583377a3e0e542b85acb3394ebb 371 PRINTS PR00182 E.coli/Neisseria porin superfamily signature 307 324 3.1E-8 T 01-11-2018 IPR001702 Porin, Gram-negative type GO:0015288|GO:0016020|GO:0055085 CDA09_17755 adc3e583377a3e0e542b85acb3394ebb 371 Gene3D G3DSA:2.40.160.10 12 371 3.4E-72 T 01-11-2018 IPR023614 Porin domain superfamily CDA09_17755 adc3e583377a3e0e542b85acb3394ebb 371 SUPERFAMILY SSF56935 23 371 6.41E-60 T 01-11-2018 CDA09_17755 adc3e583377a3e0e542b85acb3394ebb 371 Pfam PF13609 Gram-negative porin 10 332 2.2E-48 T 01-11-2018 CDA09_16510 aa76b2fc232aba0aff1555b64765fb13 108 PRINTS PR00421 Thioredoxin family signature 32 41 7.7E-10 T 01-11-2018 CDA09_16510 aa76b2fc232aba0aff1555b64765fb13 108 PRINTS PR00421 Thioredoxin family signature 24 32 7.7E-10 T 01-11-2018 CDA09_16510 aa76b2fc232aba0aff1555b64765fb13 108 PRINTS PR00421 Thioredoxin family signature 72 83 7.7E-10 T 01-11-2018 CDA09_16510 aa76b2fc232aba0aff1555b64765fb13 108 PIRSF PIRSF000077 2 108 3.4E-44 T 01-11-2018 IPR005746 Thioredoxin GO:0006662|GO:0015035|GO:0045454 CDA09_16510 aa76b2fc232aba0aff1555b64765fb13 108 Pfam PF00085 Thioredoxin 5 106 1.7E-34 T 01-11-2018 IPR013766 Thioredoxin domain GO:0045454 CDA09_16510 aa76b2fc232aba0aff1555b64765fb13 108 TIGRFAM TIGR01068 thioredoxin: thioredoxin 9 107 4.0E-39 T 01-11-2018 IPR005746 Thioredoxin GO:0006662|GO:0015035|GO:0045454 CDA09_16510 aa76b2fc232aba0aff1555b64765fb13 108 Gene3D G3DSA:3.40.30.10 5 108 4.4E-35 T 01-11-2018 CDA09_16510 aa76b2fc232aba0aff1555b64765fb13 108 ProSitePatterns PS00194 Thioredoxin family active site. 25 43 - T 01-11-2018 IPR017937 Thioredoxin, conserved site GO:0045454 CDA09_16510 aa76b2fc232aba0aff1555b64765fb13 108 SUPERFAMILY SSF52833 3 108 4.93E-40 T 01-11-2018 IPR036249 Thioredoxin-like superfamily CDA09_02295 3161b7b932db85398198bcab84b80245 306 SMART SM00849 21 205 2.3E-22 T 01-11-2018 IPR001279 Metallo-beta-lactamase CDA09_02295 3161b7b932db85398198bcab84b80245 306 Gene3D G3DSA:3.60.15.10 5 236 4.0E-35 T 01-11-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like CDA09_02295 3161b7b932db85398198bcab84b80245 306 SUPERFAMILY SSF56281 17 233 7.7E-41 T 01-11-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like CDA09_02295 3161b7b932db85398198bcab84b80245 306 Pfam PF00753 Metallo-beta-lactamase superfamily 16 205 1.3E-21 T 01-11-2018 IPR001279 Metallo-beta-lactamase CDA09_00085 5c0ccbff9d30435f7b19cb409fa0f12a 548 SUPERFAMILY SSF158472 314 363 2.48E-6 T 01-11-2018 CDA09_00085 5c0ccbff9d30435f7b19cb409fa0f12a 548 SUPERFAMILY SSF55073 384 469 2.2E-23 T 01-11-2018 IPR029787 Nucleotide cyclase CDA09_00085 5c0ccbff9d30435f7b19cb409fa0f12a 548 Pfam PF02743 Cache domain 44 275 6.1E-19 T 01-11-2018 IPR033479 Double Cache domain 1 CDA09_00085 5c0ccbff9d30435f7b19cb409fa0f12a 548 Pfam PF00672 HAMP domain 314 363 4.2E-6 T 01-11-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 CDA09_00085 5c0ccbff9d30435f7b19cb409fa0f12a 548 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 375 462 1.7E-25 T 01-11-2018 IPR000160 GGDEF domain CDA09_00085 5c0ccbff9d30435f7b19cb409fa0f12a 548 Gene3D G3DSA:3.30.70.270 372 475 1.8E-28 T 01-11-2018 CDA09_00085 5c0ccbff9d30435f7b19cb409fa0f12a 548 SMART SM00267 368 523 7.1E-11 T 01-11-2018 IPR000160 GGDEF domain CDA09_00085 5c0ccbff9d30435f7b19cb409fa0f12a 548 Gene3D G3DSA:3.30.450.20 35 184 2.6E-15 T 01-11-2018 CDA09_00085 5c0ccbff9d30435f7b19cb409fa0f12a 548 SMART SM00304 313 366 0.0058 T 01-11-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 CDA09_00085 5c0ccbff9d30435f7b19cb409fa0f12a 548 Gene3D G3DSA:1.20.1480.50 272 371 1.2E-5 T 01-11-2018 CDA09_00085 5c0ccbff9d30435f7b19cb409fa0f12a 548 Pfam PF00990 Diguanylate cyclase, GGDEF domain 380 462 3.2E-22 T 01-11-2018 IPR000160 GGDEF domain CDA09_07955 7cd2a9c1dc0ebdae8dc11bd2082b894c 273 SUPERFAMILY SSF161098 77 255 4.58E-30 T 01-11-2018 IPR035906 MetI-like superfamily CDA09_07955 7cd2a9c1dc0ebdae8dc11bd2082b894c 273 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 99 256 2.6E-20 T 01-11-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 CDA09_07955 7cd2a9c1dc0ebdae8dc11bd2082b894c 273 Gene3D G3DSA:1.10.3720.10 70 264 1.1E-23 T 01-11-2018 IPR035906 MetI-like superfamily CDA09_22265 465a19fefed54d5460258629f0946fd1 144 Gene3D G3DSA:1.10.1200.120 3 144 3.6E-42 T 01-11-2018 IPR036019 Gated mechanosensitive channel CDA09_22265 465a19fefed54d5460258629f0946fd1 144 Hamap MF_00115 Large-conductance mechanosensitive channel [mscL]. 3 142 24.514 T 01-11-2018 IPR001185 Large-conductance mechanosensitive channel GO:0008381|GO:0016021|GO:0034220 CDA09_22265 465a19fefed54d5460258629f0946fd1 144 Pfam PF01741 Large-conductance mechanosensitive channel, MscL 3 141 6.4E-45 T 01-11-2018 IPR037673 Large-conductance mechanosensitive channel/anditomin synthesis protein L CDA09_22265 465a19fefed54d5460258629f0946fd1 144 SUPERFAMILY SSF81330 12 137 6.15E-35 T 01-11-2018 IPR036019 Gated mechanosensitive channel CDA09_22265 465a19fefed54d5460258629f0946fd1 144 ProSitePatterns PS01327 Large-conductance mechanosensitive channels mscL family signature. 13 26 - T 01-11-2018 IPR019823 Large-conductance mechanosensitive channel, conserved site CDA09_22265 465a19fefed54d5460258629f0946fd1 144 TIGRFAM TIGR00220 mscL: large conductance mechanosensitive channel protein 3 142 3.1E-45 T 01-11-2018 IPR001185 Large-conductance mechanosensitive channel GO:0008381|GO:0016021|GO:0034220 CDA09_22265 465a19fefed54d5460258629f0946fd1 144 PRINTS PR01264 Bacterial mechano-sensitive ion channel signature 6 20 1.6E-14 T 01-11-2018 IPR001185 Large-conductance mechanosensitive channel GO:0008381|GO:0016021|GO:0034220 CDA09_22265 465a19fefed54d5460258629f0946fd1 144 PRINTS PR01264 Bacterial mechano-sensitive ion channel signature 91 99 1.6E-14 T 01-11-2018 IPR001185 Large-conductance mechanosensitive channel GO:0008381|GO:0016021|GO:0034220 CDA09_22265 465a19fefed54d5460258629f0946fd1 144 PRINTS PR01264 Bacterial mechano-sensitive ion channel signature 100 109 1.6E-14 T 01-11-2018 IPR001185 Large-conductance mechanosensitive channel GO:0008381|GO:0016021|GO:0034220 CDA09_11300 d79659ef71132c4794ffad04a1f399f7 347 Gene3D G3DSA:3.30.230.10 32 161 4.7E-7 T 01-11-2018 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup CDA09_11300 d79659ef71132c4794ffad04a1f399f7 347 TIGRFAM TIGR00144 beta_RFAP_syn: beta-ribofuranosylaminobenzene 5'-phosphate synthase family 19 333 1.5E-41 T 01-11-2018 IPR004422 GHMP kinase group 1 KEGG: 00790+2.4.2.54|MetaCyc: PWY-6148 CDA09_11300 d79659ef71132c4794ffad04a1f399f7 347 PIRSF PIRSF004884 14 335 2.6E-72 T 01-11-2018 IPR004422 GHMP kinase group 1 KEGG: 00790+2.4.2.54|MetaCyc: PWY-6148 CDA09_11300 d79659ef71132c4794ffad04a1f399f7 347 SUPERFAMILY SSF54211 19 163 5.16E-15 T 01-11-2018 IPR020568 Ribosomal protein S5 domain 2-type fold CDA09_12860 ab394c94db826e4066c77347a60a25e8 185 Gene3D G3DSA:3.30.700.20 11 184 2.4E-47 T 01-11-2018 IPR027485 AMMECR1, N-terminal CDA09_12860 ab394c94db826e4066c77347a60a25e8 185 SUPERFAMILY SSF143447 6 184 8.76E-54 T 01-11-2018 IPR036071 AMMECR1 domain superfamily CDA09_12860 ab394c94db826e4066c77347a60a25e8 185 Gene3D G3DSA:3.30.1490.150 110 182 2.4E-47 T 01-11-2018 CDA09_12860 ab394c94db826e4066c77347a60a25e8 185 TIGRFAM TIGR00296 TIGR00296: uncharacterized protein, PH0010 family 10 167 7.1E-28 T 01-11-2018 IPR023473 AMMECR1 CDA09_12860 ab394c94db826e4066c77347a60a25e8 185 TIGRFAM TIGR04335 AmmeMemoSam_A: AmmeMemoRadiSam system protein A 12 182 3.2E-54 T 01-11-2018 IPR027623 AmmeMemoRadiSam system protein A CDA09_12860 ab394c94db826e4066c77347a60a25e8 185 Pfam PF01871 AMMECR1 17 181 1.7E-42 T 01-11-2018 IPR002733 AMMECR1 domain CDA09_16785 ce7cd4d6b6c70571062b59a6a57a9505 800 Gene3D G3DSA:3.40.1110.10 506 624 8.3E-82 T 01-11-2018 IPR023299 P-type ATPase, cytoplasmic domain N GO:0000166 Reactome: R-HSA-936837 CDA09_16785 ce7cd4d6b6c70571062b59a6a57a9505 800 SUPERFAMILY SSF55008 12 76 3.14E-18 T 01-11-2018 IPR036163 Heavy metal-associated domain superfamily GO:0030001|GO:0046872 CDA09_16785 ce7cd4d6b6c70571062b59a6a57a9505 800 Gene3D G3DSA:3.30.70.100 7 77 1.1E-19 T 01-11-2018 CDA09_16785 ce7cd4d6b6c70571062b59a6a57a9505 800 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 691 710 5.1E-27 T 01-11-2018 CDA09_16785 ce7cd4d6b6c70571062b59a6a57a9505 800 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 617 628 5.1E-27 T 01-11-2018 CDA09_16785 ce7cd4d6b6c70571062b59a6a57a9505 800 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 495 509 5.1E-27 T 01-11-2018 CDA09_16785 ce7cd4d6b6c70571062b59a6a57a9505 800 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 345 359 5.1E-27 T 01-11-2018 CDA09_16785 ce7cd4d6b6c70571062b59a6a57a9505 800 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 639 649 5.1E-27 T 01-11-2018 CDA09_16785 ce7cd4d6b6c70571062b59a6a57a9505 800 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 714 726 5.1E-27 T 01-11-2018 CDA09_16785 ce7cd4d6b6c70571062b59a6a57a9505 800 Gene3D G3DSA:3.40.50.1000 476 743 8.3E-82 T 01-11-2018 IPR023214 HAD superfamily CDA09_16785 ce7cd4d6b6c70571062b59a6a57a9505 800 TIGRFAM TIGR01525 ATPase-IB_hvy: heavy metal translocating P-type ATPase 232 793 1.2E-182 T 01-11-2018 IPR027256 P-type ATPase, subfamily IB GO:0006812|GO:0016021|GO:0019829 Reactome: R-HSA-936837 CDA09_16785 ce7cd4d6b6c70571062b59a6a57a9505 800 ProSitePatterns PS00154 E1-E2 ATPases phosphorylation site. 497 503 - T 01-11-2018 IPR018303 P-type ATPase, phosphorylation site Reactome: R-HSA-936837 CDA09_16785 ce7cd4d6b6c70571062b59a6a57a9505 800 TIGRFAM TIGR01494 ATPase_P-type: HAD ATPase, P-type, family IC 268 776 8.7E-90 T 01-11-2018 IPR001757 P-type ATPase GO:0016021 Reactome: R-HSA-936837 CDA09_16785 ce7cd4d6b6c70571062b59a6a57a9505 800 PRINTS PR00942 Copper-transporting ATPase 1 signature 215 240 3.6E-7 T 01-11-2018 CDA09_16785 ce7cd4d6b6c70571062b59a6a57a9505 800 PRINTS PR00942 Copper-transporting ATPase 1 signature 12 37 3.6E-7 T 01-11-2018 CDA09_16785 ce7cd4d6b6c70571062b59a6a57a9505 800 SUPERFAMILY SSF81653 298 395 3.4E-27 T 01-11-2018 IPR008250 P-type ATPase, A domain superfamily Reactome: R-HSA-936837 CDA09_16785 ce7cd4d6b6c70571062b59a6a57a9505 800 TIGRFAM TIGR00003 TIGR00003: copper ion binding protein 14 75 2.2E-11 T 01-11-2018 IPR006122 Heavy metal-associated domain, copper ion-binding GO:0005507 Reactome: R-HSA-936837 CDA09_16785 ce7cd4d6b6c70571062b59a6a57a9505 800 TIGRFAM TIGR01512 ATPase-IB2_Cd: cadmium-translocating P-type ATPase 258 793 3.0E-116 T 01-11-2018 CDA09_16785 ce7cd4d6b6c70571062b59a6a57a9505 800 SUPERFAMILY SSF56784 493 791 2.09E-56 T 01-11-2018 IPR036412 HAD-like superfamily CDA09_16785 ce7cd4d6b6c70571062b59a6a57a9505 800 Gene3D G3DSA:2.70.150.20 289 399 1.7E-37 T 01-11-2018 CDA09_16785 ce7cd4d6b6c70571062b59a6a57a9505 800 Pfam PF00403 Heavy-metal-associated domain 82 141 3.7E-12 T 01-11-2018 IPR006121 Heavy metal-associated domain, HMA GO:0030001|GO:0046872 CDA09_16785 ce7cd4d6b6c70571062b59a6a57a9505 800 Pfam PF00403 Heavy-metal-associated domain 15 74 1.5E-14 T 01-11-2018 IPR006121 Heavy metal-associated domain, HMA GO:0030001|GO:0046872 CDA09_16785 ce7cd4d6b6c70571062b59a6a57a9505 800 TIGRFAM TIGR01511 ATPase-IB1_Cu: copper-translocating P-type ATPase 213 794 8.0E-174 T 01-11-2018 CDA09_16785 ce7cd4d6b6c70571062b59a6a57a9505 800 Pfam PF00122 E1-E2 ATPase 296 474 7.1E-56 T 01-11-2018 CDA09_16785 ce7cd4d6b6c70571062b59a6a57a9505 800 Gene3D G3DSA:3.30.70.100 78 142 8.2E-18 T 01-11-2018 CDA09_16785 ce7cd4d6b6c70571062b59a6a57a9505 800 SUPERFAMILY SSF81665 263 759 6.67E-15 T 01-11-2018 IPR023298 P-type ATPase, transmembrane domain superfamily Reactome: R-HSA-936837 CDA09_16785 ce7cd4d6b6c70571062b59a6a57a9505 800 ProSitePatterns PS01047 Heavy-metal-associated domain. 17 45 - T 01-11-2018 IPR017969 Heavy-metal-associated, conserved site GO:0030001|GO:0046872 CDA09_16785 ce7cd4d6b6c70571062b59a6a57a9505 800 ProSitePatterns PS01047 Heavy-metal-associated domain. 84 112 - T 01-11-2018 IPR017969 Heavy-metal-associated, conserved site GO:0030001|GO:0046872 CDA09_16785 ce7cd4d6b6c70571062b59a6a57a9505 800 Pfam PF00702 haloacid dehalogenase-like hydrolase 492 705 2.0E-34 T 01-11-2018 CDA09_16785 ce7cd4d6b6c70571062b59a6a57a9505 800 SUPERFAMILY SSF55008 80 142 4.06E-17 T 01-11-2018 IPR036163 Heavy metal-associated domain superfamily GO:0030001|GO:0046872 CDA09_18205 cca4f8ac797da372010b168349c8e602 466 TIGRFAM TIGR01143 murF: UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase 26 451 1.6E-138 T 01-11-2018 IPR005863 UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase GO:0005524|GO:0005737|GO:0047480|GO:0071555 KEGG: 00300+6.3.2.10|KEGG: 00550+6.3.2.10|MetaCyc: PWY-6386|MetaCyc: PWY-6387|MetaCyc: PWY-7953 CDA09_18205 cca4f8ac797da372010b168349c8e602 466 Gene3D G3DSA:3.40.1190.10 83 318 1.7E-76 T 01-11-2018 IPR036565 Mur-like, catalytic domain superfamily GO:0005524|GO:0009058 Reactome: R-HSA-196757 CDA09_18205 cca4f8ac797da372010b168349c8e602 466 Pfam PF08245 Mur ligase middle domain 107 301 3.3E-44 T 01-11-2018 IPR013221 Mur ligase, central GO:0005524|GO:0009058 CDA09_18205 cca4f8ac797da372010b168349c8e602 466 Gene3D G3DSA:3.40.1390.10 7 82 1.9E-22 T 01-11-2018 CDA09_18205 cca4f8ac797da372010b168349c8e602 466 Pfam PF02875 Mur ligase family, glutamate ligase domain 322 401 7.4E-12 T 01-11-2018 IPR004101 Mur ligase, C-terminal GO:0005524|GO:0009058|GO:0016874 CDA09_18205 cca4f8ac797da372010b168349c8e602 466 SUPERFAMILY SSF53623 101 320 4.45E-52 T 01-11-2018 IPR036565 Mur-like, catalytic domain superfamily GO:0005524|GO:0009058 Reactome: R-HSA-196757 CDA09_18205 cca4f8ac797da372010b168349c8e602 466 SUPERFAMILY SSF53244 322 452 8.06E-38 T 01-11-2018 IPR036615 Mur ligase, C-terminal domain superfamily GO:0005524|GO:0009058|GO:0016874 Reactome: R-HSA-196757 CDA09_18205 cca4f8ac797da372010b168349c8e602 466 SUPERFAMILY SSF63418 14 98 2.09E-25 T 01-11-2018 IPR035911 MurE/MurF, N-terminal CDA09_18205 cca4f8ac797da372010b168349c8e602 466 Hamap MF_02019 UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase [murF]. 2 454 33.239 T 01-11-2018 IPR005863 UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase GO:0005524|GO:0005737|GO:0047480|GO:0071555 KEGG: 00300+6.3.2.10|KEGG: 00550+6.3.2.10|MetaCyc: PWY-6386|MetaCyc: PWY-6387|MetaCyc: PWY-7953 CDA09_18205 cca4f8ac797da372010b168349c8e602 466 Pfam PF01225 Mur ligase family, catalytic domain 21 97 1.2E-14 T 01-11-2018 IPR000713 Mur ligase, N-terminal catalytic domain GO:0005524|GO:0009058 CDA09_18205 cca4f8ac797da372010b168349c8e602 466 Gene3D G3DSA:3.90.190.20 321 457 5.2E-41 T 01-11-2018 IPR036615 Mur ligase, C-terminal domain superfamily GO:0005524|GO:0009058|GO:0016874 Reactome: R-HSA-196757 CDA09_11415 ce9e08c15f2c1be515ba8cb1b7340f17 1046 Gene3D G3DSA:3.30.70.1430 42 816 3.5E-217 T 01-11-2018 CDA09_11415 ce9e08c15f2c1be515ba8cb1b7340f17 1046 Gene3D G3DSA:3.30.70.1440 665 866 3.5E-217 T 01-11-2018 CDA09_11415 ce9e08c15f2c1be515ba8cb1b7340f17 1046 SUPERFAMILY SSF82714 724 804 1.96E-8 T 01-11-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains CDA09_11415 ce9e08c15f2c1be515ba8cb1b7340f17 1046 Gene3D G3DSA:1.20.1640.10 12 513 3.5E-217 T 01-11-2018 CDA09_11415 ce9e08c15f2c1be515ba8cb1b7340f17 1046 Gene3D G3DSA:3.30.2090.10 180 271 3.5E-217 T 01-11-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains CDA09_11415 ce9e08c15f2c1be515ba8cb1b7340f17 1046 Gene3D G3DSA:3.30.70.1320 134 329 3.5E-217 T 01-11-2018 CDA09_11415 ce9e08c15f2c1be515ba8cb1b7340f17 1046 SUPERFAMILY SSF82866 809 1028 1.1E-41 T 01-11-2018 CDA09_11415 ce9e08c15f2c1be515ba8cb1b7340f17 1046 TIGRFAM TIGR00914 2A0601: heavy metal efflux pump, CzcA family 4 1028 3.6E-241 T 01-11-2018 IPR004763 Cation efflux system CzcA/CusA/SilA/NccA/HelA/CnrA GO:0006812|GO:0008324|GO:0016021 CDA09_11415 ce9e08c15f2c1be515ba8cb1b7340f17 1046 SUPERFAMILY SSF82693 136 327 1.49E-17 T 01-11-2018 CDA09_11415 ce9e08c15f2c1be515ba8cb1b7340f17 1046 SUPERFAMILY SSF82866 295 503 1.7E-33 T 01-11-2018 CDA09_11415 ce9e08c15f2c1be515ba8cb1b7340f17 1046 SUPERFAMILY SSF82693 43 125 1.46E-11 T 01-11-2018 CDA09_11415 ce9e08c15f2c1be515ba8cb1b7340f17 1046 Gene3D G3DSA:1.20.1640.10 514 1026 3.5E-217 T 01-11-2018 CDA09_11415 ce9e08c15f2c1be515ba8cb1b7340f17 1046 Gene3D G3DSA:3.30.2090.10 719 808 3.5E-217 T 01-11-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains CDA09_11415 ce9e08c15f2c1be515ba8cb1b7340f17 1046 Gene3D G3DSA:3.30.70.1430 565 664 3.5E-217 T 01-11-2018 CDA09_11415 ce9e08c15f2c1be515ba8cb1b7340f17 1046 PRINTS PR00702 Acriflavin resistance protein family signature 550 567 2.6E-16 T 01-11-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 CDA09_11415 ce9e08c15f2c1be515ba8cb1b7340f17 1046 PRINTS PR00702 Acriflavin resistance protein family signature 333 356 2.6E-16 T 01-11-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 CDA09_11415 ce9e08c15f2c1be515ba8cb1b7340f17 1046 PRINTS PR00702 Acriflavin resistance protein family signature 388 412 2.6E-16 T 01-11-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 CDA09_11415 ce9e08c15f2c1be515ba8cb1b7340f17 1046 PRINTS PR00702 Acriflavin resistance protein family signature 40 58 2.6E-16 T 01-11-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 CDA09_11415 ce9e08c15f2c1be515ba8cb1b7340f17 1046 Pfam PF00873 AcrB/AcrD/AcrF family 6 1028 5.6E-191 T 01-11-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 CDA09_11415 ce9e08c15f2c1be515ba8cb1b7340f17 1046 SUPERFAMILY SSF82714 184 268 8.89E-7 T 01-11-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains CDA09_15805 0cdc244440895d152cb0541d72e0547b 436 PIRSF PIRSF000098 1 435 2.2E-163 T 01-11-2018 IPR016204 Homoserine dehydrogenase GO:0004412|GO:0006520|GO:0055114 KEGG: 00260+1.1.1.3|KEGG: 00270+1.1.1.3|KEGG: 00300+1.1.1.3 CDA09_15805 0cdc244440895d152cb0541d72e0547b 436 Gene3D G3DSA:3.40.50.720 4 340 5.9E-170 T 01-11-2018 CDA09_15805 0cdc244440895d152cb0541d72e0547b 436 SUPERFAMILY SSF55347 137 302 2.22E-51 T 01-11-2018 CDA09_15805 0cdc244440895d152cb0541d72e0547b 436 ProSitePatterns PS01042 Homoserine dehydrogenase signature. 183 205 - T 01-11-2018 IPR019811 Homoserine dehydrogenase, conserved site GO:0006520|GO:0055114 KEGG: 00260+1.1.1.3|KEGG: 00270+1.1.1.3|KEGG: 00300+1.1.1.3 CDA09_15805 0cdc244440895d152cb0541d72e0547b 436 Pfam PF01842 ACT domain 354 421 1.2E-15 T 01-11-2018 IPR002912 ACT domain CDA09_15805 0cdc244440895d152cb0541d72e0547b 436 SUPERFAMILY SSF51735 1 158 1.53E-36 T 01-11-2018 IPR036291 NAD(P)-binding domain superfamily CDA09_15805 0cdc244440895d152cb0541d72e0547b 436 SUPERFAMILY SSF55021 353 423 6.62E-14 T 01-11-2018 CDA09_15805 0cdc244440895d152cb0541d72e0547b 436 Pfam PF03447 Homoserine dehydrogenase, NAD binding domain 10 129 1.5E-22 T 01-11-2018 IPR005106 Aspartate/homoserine dehydrogenase, NAD-binding GO:0016491|GO:0050661|GO:0055114 CDA09_15805 0cdc244440895d152cb0541d72e0547b 436 Gene3D G3DSA:3.30.70.260 349 423 5.9E-170 T 01-11-2018 CDA09_15805 0cdc244440895d152cb0541d72e0547b 436 Gene3D G3DSA:3.30.360.10 136 348 5.9E-170 T 01-11-2018 CDA09_15805 0cdc244440895d152cb0541d72e0547b 436 Pfam PF00742 Homoserine dehydrogenase 137 315 1.7E-63 T 01-11-2018 IPR001342 Homoserine dehydrogenase, catalytic GO:0006520|GO:0055114 KEGG: 00260+1.1.1.3|KEGG: 00270+1.1.1.3|KEGG: 00300+1.1.1.3 CDA09_18700 fbcfd425210bbdd3b1447178601be1b4 131 Pfam PF00072 Response regulator receiver domain 8 119 3.1E-27 T 01-11-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 CDA09_18700 fbcfd425210bbdd3b1447178601be1b4 131 SUPERFAMILY SSF52172 3 127 1.39E-36 T 01-11-2018 IPR011006 CheY-like superfamily CDA09_18700 fbcfd425210bbdd3b1447178601be1b4 131 Gene3D G3DSA:3.40.50.12740 5 131 8.6E-39 T 01-11-2018 CDA09_18700 fbcfd425210bbdd3b1447178601be1b4 131 SMART SM00448 6 119 1.7E-36 T 01-11-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 CDA09_11000 864b5bf71fb972f579c21f1851459de8 251 SUPERFAMILY SSF53335 4 108 7.95E-12 T 01-11-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase CDA09_11000 864b5bf71fb972f579c21f1851459de8 251 Pfam PF08241 Methyltransferase domain 9 83 2.5E-4 T 01-11-2018 IPR013216 Methyltransferase type 11 GO:0008168 CDA09_11000 864b5bf71fb972f579c21f1851459de8 251 Gene3D G3DSA:3.40.50.150 1 144 2.4E-9 T 01-11-2018 CDA09_09575 c2df5131428b6940ab20026f4d9a0a82 255 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 174 191 3.6E-30 T 01-11-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CDA09_09575 c2df5131428b6940ab20026f4d9a0a82 255 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 3 20 3.6E-30 T 01-11-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CDA09_09575 c2df5131428b6940ab20026f4d9a0a82 255 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 153 172 3.6E-30 T 01-11-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CDA09_09575 c2df5131428b6940ab20026f4d9a0a82 255 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 210 230 3.6E-30 T 01-11-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CDA09_09575 c2df5131428b6940ab20026f4d9a0a82 255 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 61 72 3.6E-30 T 01-11-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CDA09_09575 c2df5131428b6940ab20026f4d9a0a82 255 Gene3D G3DSA:3.40.50.720 2 253 3.8E-60 T 01-11-2018 CDA09_09575 c2df5131428b6940ab20026f4d9a0a82 255 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 145 246 5.8E-25 T 01-11-2018 CDA09_09575 c2df5131428b6940ab20026f4d9a0a82 255 SUPERFAMILY SSF51735 2 248 3.89E-51 T 01-11-2018 IPR036291 NAD(P)-binding domain superfamily CDA09_09575 c2df5131428b6940ab20026f4d9a0a82 255 Pfam PF00106 short chain dehydrogenase 3 120 1.1E-6 T 01-11-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CDA09_13415 f677f323e8ee946f0fd144bc3ee77de9 239 SMART SM00822 This enzymatic domain is part of bacterial polyketide synthases and catalyses the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain. It uses NADPH to reduce the keto group to a hydroxy group. 2 186 2.5E-7 T 01-11-2018 CDA09_13415 f677f323e8ee946f0fd144bc3ee77de9 239 Gene3D G3DSA:3.40.50.720 2 239 6.7E-78 T 01-11-2018 CDA09_13415 f677f323e8ee946f0fd144bc3ee77de9 239 Pfam PF00106 short chain dehydrogenase 2 193 1.3E-55 T 01-11-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CDA09_13415 f677f323e8ee946f0fd144bc3ee77de9 239 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 130 138 8.8E-11 T 01-11-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CDA09_13415 f677f323e8ee946f0fd144bc3ee77de9 239 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 150 169 8.8E-11 T 01-11-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CDA09_13415 f677f323e8ee946f0fd144bc3ee77de9 239 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 77 88 8.8E-11 T 01-11-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CDA09_13415 f677f323e8ee946f0fd144bc3ee77de9 239 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 171 188 6.2E-42 T 01-11-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CDA09_13415 f677f323e8ee946f0fd144bc3ee77de9 239 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 150 169 6.2E-42 T 01-11-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CDA09_13415 f677f323e8ee946f0fd144bc3ee77de9 239 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 124 140 6.2E-42 T 01-11-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CDA09_13415 f677f323e8ee946f0fd144bc3ee77de9 239 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 202 222 6.2E-42 T 01-11-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CDA09_13415 f677f323e8ee946f0fd144bc3ee77de9 239 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 77 88 6.2E-42 T 01-11-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CDA09_13415 f677f323e8ee946f0fd144bc3ee77de9 239 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 3 20 6.2E-42 T 01-11-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CDA09_13415 f677f323e8ee946f0fd144bc3ee77de9 239 SUPERFAMILY SSF51735 2 238 5.75E-74 T 01-11-2018 IPR036291 NAD(P)-binding domain superfamily CDA09_12020 aa6fc4a1718eba3459557bcb1247ba34 483 SUPERFAMILY SSF52821 100 213 2.1E-29 T 01-11-2018 IPR036873 Rhodanese-like domain superfamily CDA09_12020 aa6fc4a1718eba3459557bcb1247ba34 483 Pfam PF00581 Rhodanese-like domain 114 204 7.0E-10 T 01-11-2018 IPR001763 Rhodanese-like domain CDA09_12020 aa6fc4a1718eba3459557bcb1247ba34 483 Gene3D G3DSA:3.40.50.720 216 468 1.1E-88 T 01-11-2018 CDA09_12020 aa6fc4a1718eba3459557bcb1247ba34 483 SMART SM00450 112 208 3.9E-13 T 01-11-2018 IPR001763 Rhodanese-like domain CDA09_12020 aa6fc4a1718eba3459557bcb1247ba34 483 Pfam PF00899 ThiF family 223 460 3.1E-66 T 01-11-2018 IPR000594 THIF-type NAD/FAD binding fold GO:0008641 CDA09_12020 aa6fc4a1718eba3459557bcb1247ba34 483 Gene3D G3DSA:3.40.250.10 95 212 2.1E-26 T 01-11-2018 IPR036873 Rhodanese-like domain superfamily CDA09_12020 aa6fc4a1718eba3459557bcb1247ba34 483 Pfam PF02597 ThiS family 6 93 5.4E-11 T 01-11-2018 IPR003749 Sulfur carrier ThiS/MoaD-like Reactome: R-HSA-947581 CDA09_12020 aa6fc4a1718eba3459557bcb1247ba34 483 Gene3D G3DSA:3.10.20.30 2 93 1.6E-22 T 01-11-2018 IPR012675 Beta-grasp domain superfamily CDA09_12020 aa6fc4a1718eba3459557bcb1247ba34 483 SUPERFAMILY SSF69572 217 466 1.57E-88 T 01-11-2018 IPR035985 Ubiquitin-activating enzyme GO:0008641 CDA09_12020 aa6fc4a1718eba3459557bcb1247ba34 483 SUPERFAMILY SSF54285 3 93 2.83E-15 T 01-11-2018 IPR016155 Molybdopterin synthase/thiamin biosynthesis sulphur carrier, beta-grasp CDA09_12105 063aea941bd8066597a32177717409dc 355 SUPERFAMILY SSF50129 6 181 3.65E-34 T 01-11-2018 IPR011032 GroES-like superfamily CDA09_12105 063aea941bd8066597a32177717409dc 355 Pfam PF00107 Zinc-binding dehydrogenase 179 310 9.2E-23 T 01-11-2018 IPR013149 Alcohol dehydrogenase, C-terminal GO:0055114 CDA09_12105 063aea941bd8066597a32177717409dc 355 Pfam PF08240 Alcohol dehydrogenase GroES-like domain 29 133 7.4E-23 T 01-11-2018 IPR013154 Alcohol dehydrogenase, N-terminal GO:0055114 CDA09_12105 063aea941bd8066597a32177717409dc 355 Gene3D G3DSA:3.90.180.10 18 348 5.9E-74 T 01-11-2018 CDA09_12105 063aea941bd8066597a32177717409dc 355 Gene3D G3DSA:3.40.50.720 151 300 5.9E-74 T 01-11-2018 CDA09_12105 063aea941bd8066597a32177717409dc 355 SUPERFAMILY SSF51735 142 321 5.53E-32 T 01-11-2018 IPR036291 NAD(P)-binding domain superfamily CDA09_12105 063aea941bd8066597a32177717409dc 355 TIGRFAM TIGR03201 dearomat_had: 6-hydroxycyclohex-1-ene-1-carbonyl-CoA dehydrogenase 8 353 4.3E-187 T 01-11-2018 IPR017614 6-hydroxycyclohex-1-ene-1-carbonyl-CoA dehydrogenase KEGG: 00362+1.1.1.368|MetaCyc: PWY-7401 CDA09_18100 7b6699641d81e853a91cc00e287375d8 309 Pfam PF02355 Protein export membrane protein 109 291 2.1E-62 T 01-11-2018 IPR022813 Protein-export membrane protein SecD/SecF, archaeal and bacterial CDA09_18100 7b6699641d81e853a91cc00e287375d8 309 Gene3D G3DSA:1.20.1640.10 107 306 2.7E-10 T 01-11-2018 CDA09_18100 7b6699641d81e853a91cc00e287375d8 309 TIGRFAM TIGR00916 2A0604s01: protein-export membrane protein, SecD/SecF family 121 280 2.3E-46 T 01-11-2018 IPR022645 Protein-export membrane protein SecD/SecF, bacterial CDA09_18100 7b6699641d81e853a91cc00e287375d8 309 Hamap MF_01464_B Protein-export membrane protein SecF [secF]. 10 294 28.852 T 01-11-2018 IPR005665 Protein-export membrane protein SecF, bacterial GO:0006886|GO:0015450 CDA09_18100 7b6699641d81e853a91cc00e287375d8 309 SUPERFAMILY SSF82866 73 291 7.59E-37 T 01-11-2018 CDA09_18100 7b6699641d81e853a91cc00e287375d8 309 PRINTS PR01755 Bacterial translocase SecF protein signature 199 217 1.2E-26 T 01-11-2018 IPR022645 Protein-export membrane protein SecD/SecF, bacterial CDA09_18100 7b6699641d81e853a91cc00e287375d8 309 PRINTS PR01755 Bacterial translocase SecF protein signature 231 246 1.2E-26 T 01-11-2018 IPR022645 Protein-export membrane protein SecD/SecF, bacterial CDA09_18100 7b6699641d81e853a91cc00e287375d8 309 PRINTS PR01755 Bacterial translocase SecF protein signature 151 165 1.2E-26 T 01-11-2018 IPR022645 Protein-export membrane protein SecD/SecF, bacterial CDA09_18100 7b6699641d81e853a91cc00e287375d8 309 PRINTS PR01755 Bacterial translocase SecF protein signature 37 52 1.2E-26 T 01-11-2018 IPR022645 Protein-export membrane protein SecD/SecF, bacterial CDA09_18100 7b6699641d81e853a91cc00e287375d8 309 TIGRFAM TIGR00966 3a0501s07: protein-export membrane protein SecF 38 283 4.0E-72 T 01-11-2018 IPR005665 Protein-export membrane protein SecF, bacterial GO:0006886|GO:0015450 CDA09_18100 7b6699641d81e853a91cc00e287375d8 309 Pfam PF07549 SecD/SecF GG Motif 32 58 3.0E-8 T 01-11-2018 IPR022646 Protein-export membrane protein SecD/SecF/SecDF, conserved site CDA09_23025 44d31bff4910626e88cd6fe304087778 554 Pfam PF14849 YidC periplasmic domain 78 353 2.4E-86 T 01-11-2018 IPR038210 Membrane insertase YidC, periplasmic domain CDA09_23025 44d31bff4910626e88cd6fe304087778 554 TIGRFAM TIGR03592 yidC_oxa1_cterm: membrane protein insertase, YidC/Oxa1 family 363 542 2.2E-71 T 01-11-2018 IPR028055 Membrane insertase YidC/Oxa1, C-terminal Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 CDA09_23025 44d31bff4910626e88cd6fe304087778 554 PRINTS PR01900 YidC translocation/secretion protein signature 478 493 4.3E-26 T 01-11-2018 IPR001708 Membrane insertase YidC/ALB3/OXA1/COX18 GO:0016021|GO:0032977 CDA09_23025 44d31bff4910626e88cd6fe304087778 554 PRINTS PR01900 YidC translocation/secretion protein signature 497 521 4.3E-26 T 01-11-2018 IPR001708 Membrane insertase YidC/ALB3/OXA1/COX18 GO:0016021|GO:0032977 CDA09_23025 44d31bff4910626e88cd6fe304087778 554 PRINTS PR01900 YidC translocation/secretion protein signature 349 365 4.3E-26 T 01-11-2018 IPR001708 Membrane insertase YidC/ALB3/OXA1/COX18 GO:0016021|GO:0032977 CDA09_23025 44d31bff4910626e88cd6fe304087778 554 Gene3D G3DSA:2.70.98.90 75 343 2.2E-84 T 01-11-2018 IPR038221 YidC, periplasmic domain superfamily CDA09_23025 44d31bff4910626e88cd6fe304087778 554 TIGRFAM TIGR03593 yidC_nterm: membrane protein insertase, YidC/Oxa1 family, N-terminal domain 3 362 1.8E-115 T 01-11-2018 IPR028053 Membrane insertase YidC, N-terminal CDA09_23025 44d31bff4910626e88cd6fe304087778 554 Hamap MF_01810 Membrane protein insertase YidC [yidC]. 4 544 25.13 T 01-11-2018 IPR019998 Membrane insertase YidC GO:0016021|GO:0032977 CDA09_23025 44d31bff4910626e88cd6fe304087778 554 Pfam PF02096 60Kd inner membrane protein 364 541 1.2E-60 T 01-11-2018 IPR001708 Membrane insertase YidC/ALB3/OXA1/COX18 GO:0016021|GO:0032977 CDA09_23025 44d31bff4910626e88cd6fe304087778 554 PRINTS PR00701 60kDa inner membrane protein signature 334 354 5.9E-77 T 01-11-2018 IPR001708 Membrane insertase YidC/ALB3/OXA1/COX18 GO:0016021|GO:0032977 CDA09_23025 44d31bff4910626e88cd6fe304087778 554 PRINTS PR00701 60kDa inner membrane protein signature 84 105 5.9E-77 T 01-11-2018 IPR001708 Membrane insertase YidC/ALB3/OXA1/COX18 GO:0016021|GO:0032977 CDA09_23025 44d31bff4910626e88cd6fe304087778 554 PRINTS PR00701 60kDa inner membrane protein signature 425 448 5.9E-77 T 01-11-2018 IPR001708 Membrane insertase YidC/ALB3/OXA1/COX18 GO:0016021|GO:0032977 CDA09_23025 44d31bff4910626e88cd6fe304087778 554 PRINTS PR00701 60kDa inner membrane protein signature 508 531 5.9E-77 T 01-11-2018 IPR001708 Membrane insertase YidC/ALB3/OXA1/COX18 GO:0016021|GO:0032977 CDA09_23025 44d31bff4910626e88cd6fe304087778 554 PRINTS PR00701 60kDa inner membrane protein signature 472 494 5.9E-77 T 01-11-2018 IPR001708 Membrane insertase YidC/ALB3/OXA1/COX18 GO:0016021|GO:0032977 CDA09_23025 44d31bff4910626e88cd6fe304087778 554 PRINTS PR00701 60kDa inner membrane protein signature 171 191 5.9E-77 T 01-11-2018 IPR001708 Membrane insertase YidC/ALB3/OXA1/COX18 GO:0016021|GO:0032977 CDA09_23025 44d31bff4910626e88cd6fe304087778 554 PRINTS PR00701 60kDa inner membrane protein signature 226 244 5.9E-77 T 01-11-2018 IPR001708 Membrane insertase YidC/ALB3/OXA1/COX18 GO:0016021|GO:0032977 CDA09_23025 44d31bff4910626e88cd6fe304087778 554 PRINTS PR00701 60kDa inner membrane protein signature 261 276 5.9E-77 T 01-11-2018 IPR001708 Membrane insertase YidC/ALB3/OXA1/COX18 GO:0016021|GO:0032977 CDA09_23025 44d31bff4910626e88cd6fe304087778 554 PRINTS PR00701 60kDa inner membrane protein signature 2 23 5.9E-77 T 01-11-2018 IPR001708 Membrane insertase YidC/ALB3/OXA1/COX18 GO:0016021|GO:0032977 CDA09_16880 3de14a40f5266167d2d8a5e88f19d72c 67 Pfam PF03597 Cytochrome oxidase maturation protein cbb3-type 2 45 1.1E-23 T 01-11-2018 IPR004714 Cytochrome oxidase maturation protein cbb3-type CDA09_16880 3de14a40f5266167d2d8a5e88f19d72c 67 TIGRFAM TIGR00847 ccoS: cytochrome oxidase maturation protein, cbb3-type 1 46 2.4E-21 T 01-11-2018 IPR004714 Cytochrome oxidase maturation protein cbb3-type CDA09_11280 e227e93014c428584bb45482ea511ed0 264 PIRSF PIRSF002854 1 264 6.3E-97 T 01-11-2018 IPR004872 Lipoprotein NlpA family CDA09_11280 e227e93014c428584bb45482ea511ed0 264 SUPERFAMILY SSF53850 27 264 1.63E-77 T 01-11-2018 CDA09_11280 e227e93014c428584bb45482ea511ed0 264 Gene3D G3DSA:3.40.190.10 28 261 2.2E-92 T 01-11-2018 CDA09_11280 e227e93014c428584bb45482ea511ed0 264 Pfam PF03180 NLPA lipoprotein 28 264 1.6E-91 T 01-11-2018 IPR004872 Lipoprotein NlpA family CDA09_11280 e227e93014c428584bb45482ea511ed0 264 Gene3D G3DSA:3.40.190.10 110 214 2.2E-92 T 01-11-2018 CDA09_06910 7285001611e8209035588a752a3f2b3f 889 SUPERFAMILY SSF52518 61 468 3.3E-133 T 01-11-2018 IPR029061 Thiamin diphosphate-binding fold CDA09_06910 7285001611e8209035588a752a3f2b3f 889 SUPERFAMILY SSF52518 473 701 3.14E-96 T 01-11-2018 IPR029061 Thiamin diphosphate-binding fold CDA09_06910 7285001611e8209035588a752a3f2b3f 889 TIGRFAM TIGR00759 aceE: pyruvate dehydrogenase (acetyl-transferring), homodimeric type 10 888 0.0 T 01-11-2018 IPR004660 2-oxo-acid dehydrogenase E1 component homodimeric type GO:0016491|GO:0055114 KEGG: 00010+1.2.4.1|KEGG: 00020+1.2.4.1|KEGG: 00620+1.2.4.1 CDA09_06910 7285001611e8209035588a752a3f2b3f 889 PIRSF PIRSF000156 2 889 0.0 T 01-11-2018 IPR004660 2-oxo-acid dehydrogenase E1 component homodimeric type GO:0016491|GO:0055114 KEGG: 00010+1.2.4.1|KEGG: 00020+1.2.4.1|KEGG: 00620+1.2.4.1 CDA09_06910 7285001611e8209035588a752a3f2b3f 889 Gene3D G3DSA:3.40.50.920 708 889 4.9E-73 T 01-11-2018 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II GO:0003824 CDA09_06910 7285001611e8209035588a752a3f2b3f 889 Pfam PF00456 Transketolase, thiamine diphosphate binding domain 87 298 1.1E-8 T 01-11-2018 IPR005474 Transketolase, N-terminal KEGG: 00730+2.2.1.7|KEGG: 00900+2.2.1.7|MetaCyc: PWY-6891|MetaCyc: PWY-6892|MetaCyc: PWY-7560 CDA09_06910 7285001611e8209035588a752a3f2b3f 889 SUPERFAMILY SSF52922 706 887 3.14E-57 T 01-11-2018 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II GO:0003824 CDA09_06910 7285001611e8209035588a752a3f2b3f 889 Gene3D G3DSA:3.40.50.970 473 707 4.0E-108 T 01-11-2018 CDA09_06910 7285001611e8209035588a752a3f2b3f 889 Gene3D G3DSA:3.40.50.970 60 472 8.9E-128 T 01-11-2018 CDA09_05220 8497bcf73b95d475a2cbd3ce148cc60c 208 SUPERFAMILY SSF46626 21 107 1.39E-18 T 01-11-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 CDA09_05220 8497bcf73b95d475a2cbd3ce148cc60c 208 SUPERFAMILY SSF46626 117 206 2.25E-20 T 01-11-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 CDA09_05220 8497bcf73b95d475a2cbd3ce148cc60c 208 Gene3D G3DSA:1.10.760.10 16 109 1.1E-21 T 01-11-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 CDA09_05220 8497bcf73b95d475a2cbd3ce148cc60c 208 Gene3D G3DSA:1.10.760.10 113 208 2.4E-27 T 01-11-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 CDA09_05220 8497bcf73b95d475a2cbd3ce148cc60c 208 PIRSF PIRSF000005 1 208 5.9E-63 T 01-11-2018 IPR024167 Cytochrome c4-like GO:0005506|GO:0009055|GO:0020037|GO:0042597 CDA09_05220 8497bcf73b95d475a2cbd3ce148cc60c 208 Pfam PF00034 Cytochrome c 138 204 2.1E-7 T 01-11-2018 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 Reactome: R-HSA-111457|Reactome: R-HSA-111458|Reactome: R-HSA-111459|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 CDA09_05220 8497bcf73b95d475a2cbd3ce148cc60c 208 Pfam PF00034 Cytochrome c 27 107 1.0E-5 T 01-11-2018 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 Reactome: R-HSA-111457|Reactome: R-HSA-111458|Reactome: R-HSA-111459|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 CDA09_20400 7d0cc95b9b4f2794c03b0be9289a6141 480 Gene3D G3DSA:3.40.710.10 281 472 1.7E-56 T 01-11-2018 CDA09_20400 7d0cc95b9b4f2794c03b0be9289a6141 480 TIGRFAM TIGR00666 PBP4: D-alanyl-D-alanine carboxypeptidase/D-alanyl-D-alanine-endopeptidase 58 453 3.4E-65 T 01-11-2018 IPR000667 Peptidase S13, D-Ala-D-Ala carboxypeptidase C GO:0004185|GO:0006508 KEGG: 00550+3.4.16.4|MetaCyc: PWY-5265|MetaCyc: PWY-6471 CDA09_20400 7d0cc95b9b4f2794c03b0be9289a6141 480 SUPERFAMILY SSF56601 25 474 1.2E-91 T 01-11-2018 IPR012338 Beta-lactamase/transpeptidase-like CDA09_20400 7d0cc95b9b4f2794c03b0be9289a6141 480 PRINTS PR00922 D-Ala-D-Ala carboxypeptidase 3 (S13) family signature 67 86 8.1E-27 T 01-11-2018 IPR000667 Peptidase S13, D-Ala-D-Ala carboxypeptidase C GO:0004185|GO:0006508 KEGG: 00550+3.4.16.4|MetaCyc: PWY-5265|MetaCyc: PWY-6471 CDA09_20400 7d0cc95b9b4f2794c03b0be9289a6141 480 PRINTS PR00922 D-Ala-D-Ala carboxypeptidase 3 (S13) family signature 354 368 8.1E-27 T 01-11-2018 IPR000667 Peptidase S13, D-Ala-D-Ala carboxypeptidase C GO:0004185|GO:0006508 KEGG: 00550+3.4.16.4|MetaCyc: PWY-5265|MetaCyc: PWY-6471 CDA09_20400 7d0cc95b9b4f2794c03b0be9289a6141 480 PRINTS PR00922 D-Ala-D-Ala carboxypeptidase 3 (S13) family signature 431 444 8.1E-27 T 01-11-2018 IPR000667 Peptidase S13, D-Ala-D-Ala carboxypeptidase C GO:0004185|GO:0006508 KEGG: 00550+3.4.16.4|MetaCyc: PWY-5265|MetaCyc: PWY-6471 CDA09_20400 7d0cc95b9b4f2794c03b0be9289a6141 480 PRINTS PR00922 D-Ala-D-Ala carboxypeptidase 3 (S13) family signature 369 383 8.1E-27 T 01-11-2018 IPR000667 Peptidase S13, D-Ala-D-Ala carboxypeptidase C GO:0004185|GO:0006508 KEGG: 00550+3.4.16.4|MetaCyc: PWY-5265|MetaCyc: PWY-6471 CDA09_20400 7d0cc95b9b4f2794c03b0be9289a6141 480 PRINTS PR00922 D-Ala-D-Ala carboxypeptidase 3 (S13) family signature 296 318 8.1E-27 T 01-11-2018 IPR000667 Peptidase S13, D-Ala-D-Ala carboxypeptidase C GO:0004185|GO:0006508 KEGG: 00550+3.4.16.4|MetaCyc: PWY-5265|MetaCyc: PWY-6471 CDA09_20400 7d0cc95b9b4f2794c03b0be9289a6141 480 Pfam PF02113 D-Ala-D-Ala carboxypeptidase 3 (S13) family 33 470 1.1E-90 T 01-11-2018 IPR000667 Peptidase S13, D-Ala-D-Ala carboxypeptidase C GO:0004185|GO:0006508 KEGG: 00550+3.4.16.4|MetaCyc: PWY-5265|MetaCyc: PWY-6471 CDA09_20400 7d0cc95b9b4f2794c03b0be9289a6141 480 Gene3D G3DSA:3.50.80.20 91 185 5.3E-16 T 01-11-2018 CDA09_19195 862766f336adb935566a4d67810d284e 86 Pfam PF02604 Antitoxin Phd_YefM, type II toxin-antitoxin system 3 50 2.4E-12 T 01-11-2018 IPR006442 Type II toxin-antitoxin system, antitoxin Phd/YefM CDA09_19195 862766f336adb935566a4d67810d284e 86 TIGRFAM TIGR01552 phd_fam: prevent-host-death family protein 5 48 3.2E-8 T 01-11-2018 CDA09_19195 862766f336adb935566a4d67810d284e 86 SUPERFAMILY SSF143120 4 70 2.22E-11 T 01-11-2018 IPR036165 YefM-like superfamily CDA09_19195 862766f336adb935566a4d67810d284e 86 Gene3D G3DSA:3.40.1620.10 2 52 2.3E-17 T 01-11-2018 CDA09_05255 403a98fd9d6021be326910c582706f17 155 PIRSF PIRSF029256 1 154 6.9E-62 T 01-11-2018 IPR016914 tRNA (cytidine/uridine-2'-O-)-methyltransferase GO:0001510|GO:0008168 CDA09_05255 403a98fd9d6021be326910c582706f17 155 Hamap MF_01885 tRNA (cytidine(34)-2'-O)-methyltransferase [trmL]. 2 151 32.35 T 01-11-2018 IPR016914 tRNA (cytidine/uridine-2'-O-)-methyltransferase GO:0001510|GO:0008168 CDA09_05255 403a98fd9d6021be326910c582706f17 155 SUPERFAMILY SSF75217 2 152 6.34E-42 T 01-11-2018 IPR029028 Alpha/beta knot methyltransferases CDA09_05255 403a98fd9d6021be326910c582706f17 155 Pfam PF00588 SpoU rRNA Methylase family 2 141 3.2E-30 T 01-11-2018 IPR001537 tRNA/rRNA methyltransferase, SpoU type GO:0003723|GO:0006396|GO:0008173 CDA09_05255 403a98fd9d6021be326910c582706f17 155 Gene3D G3DSA:3.40.1280.10 1 155 6.1E-61 T 01-11-2018 IPR029026 tRNA (guanine-N1-)-methyltransferase, N-terminal CDA09_21135 7e89b5b36064d032ba117f099b8c771c 406 Gene3D G3DSA:3.40.50.12170 8 405 3.8E-107 T 01-11-2018 CDA09_21135 7e89b5b36064d032ba117f099b8c771c 406 PIRSF PIRSF016719 1 406 6.3E-107 T 01-11-2018 IPR008302 Uncharacterised conserved protein UCP016719 CDA09_21135 7e89b5b36064d032ba117f099b8c771c 406 Gene3D G3DSA:3.90.1150.140 226 390 3.8E-107 T 01-11-2018 CDA09_21135 7e89b5b36064d032ba117f099b8c771c 406 Pfam PF07075 Protein of unknown function (DUF1343) 27 405 1.6E-111 T 01-11-2018 IPR008302 Uncharacterised conserved protein UCP016719 CDA09_20320 334bc049ef186389f5c5804c603be809 360 Gene3D G3DSA:1.20.1090.10 173 359 1.8E-65 T 01-11-2018 CDA09_20320 334bc049ef186389f5c5804c603be809 360 PIRSF PIRSF001455 21 359 3.4E-106 T 01-11-2018 IPR030963 3-dehydroquinate synthase family GO:0009073|GO:0016838 KEGG: 00400+4.2.3.4|MetaCyc: PWY-6164 CDA09_20320 334bc049ef186389f5c5804c603be809 360 TIGRFAM TIGR01357 aroB: 3-dehydroquinate synthase 15 352 1.8E-115 T 01-11-2018 IPR016037 3-dehydroquinate synthase AroB GO:0003856|GO:0005737|GO:0009073 KEGG: 00400+4.2.3.4|MetaCyc: PWY-6164 CDA09_20320 334bc049ef186389f5c5804c603be809 360 SUPERFAMILY SSF56796 3 355 1.44E-120 T 01-11-2018 CDA09_20320 334bc049ef186389f5c5804c603be809 360 Gene3D G3DSA:3.40.50.1970 1 172 1.0E-65 T 01-11-2018 CDA09_20320 334bc049ef186389f5c5804c603be809 360 Hamap MF_00110 3-dehydroquinate synthase [aroB]. 1 355 73.828 T 01-11-2018 IPR016037 3-dehydroquinate synthase AroB GO:0003856|GO:0005737|GO:0009073 KEGG: 00400+4.2.3.4|MetaCyc: PWY-6164 CDA09_20320 334bc049ef186389f5c5804c603be809 360 Pfam PF01761 3-dehydroquinate synthase 67 324 5.2E-107 T 01-11-2018 IPR030960 3-dehydroquinate synthase domain KEGG: 00400+4.2.3.4|MetaCyc: PWY-6164 CDA09_05905 aa1c3674c773f84c9f17837ac6833543 276 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 102 259 1.5E-14 T 01-11-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 CDA09_05905 aa1c3674c773f84c9f17837ac6833543 276 SUPERFAMILY SSF161098 78 256 8.37E-23 T 01-11-2018 IPR035906 MetI-like superfamily CDA09_05905 aa1c3674c773f84c9f17837ac6833543 276 Gene3D G3DSA:1.10.3720.10 75 270 2.1E-19 T 01-11-2018 IPR035906 MetI-like superfamily CDA09_00945 cd8171d583480b990e2a4f8329c47ac5 234 Gene3D G3DSA:2.60.120.560 21 231 4.1E-19 T 01-11-2018 CDA09_00945 cd8171d583480b990e2a4f8329c47ac5 234 SUPERFAMILY SSF49899 86 209 1.3E-8 T 01-11-2018 IPR013320 Concanavalin A-like lectin/glucanase domain superfamily CDA09_16645 5398a9848cd603041795f14d1634bff1 435 SUPERFAMILY SSF55031 205 306 3.27E-26 T 01-11-2018 IPR036264 Bacterial exopeptidase dimerisation domain CDA09_16645 5398a9848cd603041795f14d1634bff1 435 TIGRFAM TIGR01891 amidohydrolases: amidohydrolase 29 374 1.7E-75 T 01-11-2018 IPR017439 Amidohydrolase GO:0016787 CDA09_16645 5398a9848cd603041795f14d1634bff1 435 Pfam PF07687 Peptidase dimerisation domain 206 303 7.3E-8 T 01-11-2018 IPR011650 Peptidase M20, dimerisation domain CDA09_16645 5398a9848cd603041795f14d1634bff1 435 PIRSF PIRSF005962 17 422 8.0E-92 T 01-11-2018 IPR017439 Amidohydrolase GO:0016787 CDA09_16645 5398a9848cd603041795f14d1634bff1 435 Gene3D G3DSA:3.40.630.10 29 374 4.0E-108 T 01-11-2018 CDA09_16645 5398a9848cd603041795f14d1634bff1 435 SUPERFAMILY SSF53187 22 423 1.73E-70 T 01-11-2018 CDA09_16645 5398a9848cd603041795f14d1634bff1 435 Pfam PF01546 Peptidase family M20/M25/M40 83 373 3.3E-20 T 01-11-2018 IPR002933 Peptidase M20 GO:0016787 CDA09_16645 5398a9848cd603041795f14d1634bff1 435 Gene3D G3DSA:3.30.70.360 202 318 4.0E-108 T 01-11-2018 CDA09_05020 90a7cbe76847954ee8df4ccad0edfc28 454 Pfam PF00557 Metallopeptidase family M24 194 425 1.9E-64 T 01-11-2018 IPR000994 Peptidase M24 CDA09_05020 90a7cbe76847954ee8df4ccad0edfc28 454 SMART SM01011 14 149 5.5E-59 T 01-11-2018 IPR007865 Aminopeptidase P, N-terminal GO:0004177|GO:0030145 CDA09_05020 90a7cbe76847954ee8df4ccad0edfc28 454 Gene3D G3DSA:3.40.350.10 16 184 4.0E-47 T 01-11-2018 IPR029149 Creatinase/Aminopeptidase P/Spt16, N-terminal CDA09_05020 90a7cbe76847954ee8df4ccad0edfc28 454 SUPERFAMILY SSF55920 188 447 3.27E-85 T 01-11-2018 IPR036005 Creatinase/aminopeptidase-like CDA09_05020 90a7cbe76847954ee8df4ccad0edfc28 454 Gene3D G3DSA:3.90.230.10 185 452 2.8E-98 T 01-11-2018 CDA09_05020 90a7cbe76847954ee8df4ccad0edfc28 454 Pfam PF05195 Aminopeptidase P, N-terminal domain 19 135 1.1E-34 T 01-11-2018 IPR007865 Aminopeptidase P, N-terminal GO:0004177|GO:0030145 CDA09_05020 90a7cbe76847954ee8df4ccad0edfc28 454 PRINTS PR00599 Methionine aminopeptidase-1 signature 266 282 5.1E-6 T 01-11-2018 IPR001714 Peptidase M24, methionine aminopeptidase MetaCyc: PWY-7799|MetaCyc: PWY-7800 CDA09_05020 90a7cbe76847954ee8df4ccad0edfc28 454 PRINTS PR00599 Methionine aminopeptidase-1 signature 244 257 5.1E-6 T 01-11-2018 IPR001714 Peptidase M24, methionine aminopeptidase MetaCyc: PWY-7799|MetaCyc: PWY-7800 CDA09_05020 90a7cbe76847954ee8df4ccad0edfc28 454 PRINTS PR00599 Methionine aminopeptidase-1 signature 384 396 5.1E-6 T 01-11-2018 IPR001714 Peptidase M24, methionine aminopeptidase MetaCyc: PWY-7799|MetaCyc: PWY-7800 CDA09_05020 90a7cbe76847954ee8df4ccad0edfc28 454 SUPERFAMILY SSF53092 15 187 5.49E-49 T 01-11-2018 IPR029149 Creatinase/Aminopeptidase P/Spt16, N-terminal CDA09_13455 0a7559dac14936683d5ea44e6300ca67 203 PRINTS PR00726 Repressor LexA serine protease (S24) family signature 152 164 3.4E-11 T 01-11-2018 IPR006197 Peptidase S24, LexA-like GO:0003677|GO:0006355 CDA09_13455 0a7559dac14936683d5ea44e6300ca67 203 PRINTS PR00726 Repressor LexA serine protease (S24) family signature 124 135 3.4E-11 T 01-11-2018 IPR006197 Peptidase S24, LexA-like GO:0003677|GO:0006355 CDA09_13455 0a7559dac14936683d5ea44e6300ca67 203 PRINTS PR00726 Repressor LexA serine protease (S24) family signature 113 123 3.4E-11 T 01-11-2018 IPR006197 Peptidase S24, LexA-like GO:0003677|GO:0006355 CDA09_13455 0a7559dac14936683d5ea44e6300ca67 203 SUPERFAMILY SSF51306 77 199 6.45E-34 T 01-11-2018 IPR036286 LexA/Signal peptidase-like superfamily CDA09_13455 0a7559dac14936683d5ea44e6300ca67 203 Pfam PF00717 Peptidase S24-like 116 182 4.4E-12 T 01-11-2018 IPR015927 Peptidase S24/S26A/S26B/S26C CDA09_13455 0a7559dac14936683d5ea44e6300ca67 203 Gene3D G3DSA:1.10.10.10 6 74 2.4E-24 T 01-11-2018 IPR036388 Winged helix-like DNA-binding domain superfamily CDA09_13455 0a7559dac14936683d5ea44e6300ca67 203 TIGRFAM TIGR00498 lexA: repressor LexA 6 200 4.5E-67 T 01-11-2018 IPR006200 Transcription regulator LexA GO:0004252|GO:0009432|GO:0045892 CDA09_13455 0a7559dac14936683d5ea44e6300ca67 203 Pfam PF01726 LexA DNA binding domain 6 69 1.2E-22 T 01-11-2018 IPR006199 LexA repressor, DNA-binding domain GO:0004252|GO:0006508 CDA09_13455 0a7559dac14936683d5ea44e6300ca67 203 Hamap MF_00015 LexA repressor [lexA]. 7 201 30.848 T 01-11-2018 IPR006200 Transcription regulator LexA GO:0004252|GO:0009432|GO:0045892 CDA09_13455 0a7559dac14936683d5ea44e6300ca67 203 Gene3D G3DSA:2.10.109.10 82 203 6.2E-41 T 01-11-2018 CDA09_13455 0a7559dac14936683d5ea44e6300ca67 203 SUPERFAMILY SSF46785 7 73 3.54E-17 T 01-11-2018 IPR036390 Winged helix DNA-binding domain superfamily CDA09_19810 bd735a3d982dba2d61c789f107f99cb4 262 Pfam PF00950 ABC 3 transport family 11 156 4.6E-12 T 01-11-2018 IPR001626 ABC transporter, TroCD-like GO:0005887|GO:0042626|GO:0043190|GO:0055085 CDA09_19810 bd735a3d982dba2d61c789f107f99cb4 262 SUPERFAMILY SSF81345 8 238 8.63E-10 T 01-11-2018 IPR037294 ABC transporter, BtuC-like CDA09_05985 44da35fb7f02af111f1fb344bbef8c76 512 Pfam PF03023 MviN-like protein 28 462 5.0E-142 T 01-11-2018 IPR004268 Peptidoglycan biosynthesis protein MurJ CDA09_05985 44da35fb7f02af111f1fb344bbef8c76 512 PRINTS PR01806 Virulence factor MviN signature 133 157 6.0E-84 T 01-11-2018 IPR004268 Peptidoglycan biosynthesis protein MurJ CDA09_05985 44da35fb7f02af111f1fb344bbef8c76 512 PRINTS PR01806 Virulence factor MviN signature 357 376 6.0E-84 T 01-11-2018 IPR004268 Peptidoglycan biosynthesis protein MurJ CDA09_05985 44da35fb7f02af111f1fb344bbef8c76 512 PRINTS PR01806 Virulence factor MviN signature 409 426 6.0E-84 T 01-11-2018 IPR004268 Peptidoglycan biosynthesis protein MurJ CDA09_05985 44da35fb7f02af111f1fb344bbef8c76 512 PRINTS PR01806 Virulence factor MviN signature 259 285 6.0E-84 T 01-11-2018 IPR004268 Peptidoglycan biosynthesis protein MurJ CDA09_05985 44da35fb7f02af111f1fb344bbef8c76 512 PRINTS PR01806 Virulence factor MviN signature 33 52 6.0E-84 T 01-11-2018 IPR004268 Peptidoglycan biosynthesis protein MurJ CDA09_05985 44da35fb7f02af111f1fb344bbef8c76 512 PRINTS PR01806 Virulence factor MviN signature 52 68 6.0E-84 T 01-11-2018 IPR004268 Peptidoglycan biosynthesis protein MurJ CDA09_05985 44da35fb7f02af111f1fb344bbef8c76 512 PRINTS PR01806 Virulence factor MviN signature 157 178 6.0E-84 T 01-11-2018 IPR004268 Peptidoglycan biosynthesis protein MurJ CDA09_05985 44da35fb7f02af111f1fb344bbef8c76 512 Hamap MF_02078 Probable lipid II flippase MurJ [murJ]. 3 467 20.881 T 01-11-2018 IPR004268 Peptidoglycan biosynthesis protein MurJ CDA09_05985 44da35fb7f02af111f1fb344bbef8c76 512 TIGRFAM TIGR01695 murJ_mviN: murein biosynthesis integral membrane protein MurJ 3 502 2.9E-151 T 01-11-2018 IPR004268 Peptidoglycan biosynthesis protein MurJ CDA09_05985 44da35fb7f02af111f1fb344bbef8c76 512 PIRSF PIRSF002869 1 511 4.1E-170 T 01-11-2018 IPR004268 Peptidoglycan biosynthesis protein MurJ CDA09_12205 f22e816bcfd09a5f11097ab6c90c9f4a 142 SUPERFAMILY SSF54637 1 137 1.08E-26 T 01-11-2018 IPR029069 HotDog domain superfamily CDA09_12205 f22e816bcfd09a5f11097ab6c90c9f4a 142 Gene3D G3DSA:3.10.129.10 11 140 1.2E-20 T 01-11-2018 CDA09_12205 f22e816bcfd09a5f11097ab6c90c9f4a 142 Pfam PF13279 Thioesterase-like superfamily 20 135 2.1E-10 T 01-11-2018 CDA09_12060 2a6c3e450fae846471e5e124a45e6e93 452 SUPERFAMILY SSF103473 7 438 2.09E-83 T 01-11-2018 IPR036259 MFS transporter superfamily CDA09_12060 2a6c3e450fae846471e5e124a45e6e93 452 Pfam PF07690 Major Facilitator Superfamily 27 335 1.9E-38 T 01-11-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 CDA09_12060 2a6c3e450fae846471e5e124a45e6e93 452 ProSitePatterns PS00217 Sugar transport proteins signature 2. 118 143 - T 01-11-2018 IPR005829 Sugar transporter, conserved site GO:0005215|GO:0016021|GO:0055085 CDA09_21795 bdb41465747ec317d49ccb9dd4df7619 256 Pfam PF00378 Enoyl-CoA hydratase/isomerase 10 253 9.1E-56 T 01-11-2018 IPR001753 Enoyl-CoA hydratase/isomerase GO:0003824 CDA09_21795 bdb41465747ec317d49ccb9dd4df7619 256 Gene3D G3DSA:3.90.226.10 2 255 5.3E-75 T 01-11-2018 CDA09_21795 bdb41465747ec317d49ccb9dd4df7619 256 SUPERFAMILY SSF52096 3 253 1.99E-72 T 01-11-2018 IPR029045 ClpP/crotonase-like domain superfamily CDA09_21795 bdb41465747ec317d49ccb9dd4df7619 256 ProSitePatterns PS00166 Enoyl-CoA hydratase/isomerase signature. 102 122 - T 01-11-2018 IPR018376 Enoyl-CoA hydratase/isomerase, conserved site GO:0003824 CDA09_21700 08880557ae9a58e676089ece4b1d20fc 79 Pfam PF11660 Protein of unknown function (DUF3262) 4 78 1.0E-25 T 01-11-2018 IPR021676 Protein of unknown function DUF3262 CDA09_21700 08880557ae9a58e676089ece4b1d20fc 79 TIGRFAM TIGR03758 conj_TIGR03758: integrating conjugative element protein, PFL_4701 family 4 79 4.0E-31 T 01-11-2018 IPR021676 Protein of unknown function DUF3262 CDA09_09275 89af3fc389f8b4da332d6cb04930a667 670 SUPERFAMILY SSF51905 476 638 6.02E-14 T 01-11-2018 IPR036188 FAD/NAD(P)-binding domain superfamily CDA09_09275 89af3fc389f8b4da332d6cb04930a667 670 Pfam PF00724 NADH:flavin oxidoreductase / NADH oxidase family 9 342 3.8E-61 T 01-11-2018 IPR001155 NADH:flavin oxidoreductase/NADH oxidase, N-terminal GO:0010181|GO:0016491|GO:0055114 CDA09_09275 89af3fc389f8b4da332d6cb04930a667 670 Gene3D G3DSA:3.40.50.720 392 651 4.9E-49 T 01-11-2018 CDA09_09275 89af3fc389f8b4da332d6cb04930a667 670 Gene3D G3DSA:3.20.20.70 2 380 3.8E-109 T 01-11-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 CDA09_09275 89af3fc389f8b4da332d6cb04930a667 670 SUPERFAMILY SSF51395 4 361 1.1E-94 T 01-11-2018 CDA09_09275 89af3fc389f8b4da332d6cb04930a667 670 SUPERFAMILY SSF51971 345 547 6.36E-28 T 01-11-2018 CDA09_09275 89af3fc389f8b4da332d6cb04930a667 670 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 391 410 1.2E-18 T 01-11-2018 CDA09_09275 89af3fc389f8b4da332d6cb04930a667 670 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 606 622 1.2E-18 T 01-11-2018 CDA09_09275 89af3fc389f8b4da332d6cb04930a667 670 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 518 536 1.2E-18 T 01-11-2018 CDA09_09275 89af3fc389f8b4da332d6cb04930a667 670 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 473 491 1.2E-18 T 01-11-2018 CDA09_09275 89af3fc389f8b4da332d6cb04930a667 670 Gene3D G3DSA:3.50.50.60 485 614 4.9E-49 T 01-11-2018 IPR036188 FAD/NAD(P)-binding domain superfamily CDA09_09275 89af3fc389f8b4da332d6cb04930a667 670 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 392 623 1.0E-20 T 01-11-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 CDA09_09275 89af3fc389f8b4da332d6cb04930a667 670 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 514 538 1.3E-7 T 01-11-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 CDA09_09275 89af3fc389f8b4da332d6cb04930a667 670 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 608 629 1.3E-7 T 01-11-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 CDA09_09275 89af3fc389f8b4da332d6cb04930a667 670 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 390 412 1.3E-7 T 01-11-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 CDA09_19880 b29198d73f07e425a083e3c75f0bb25c 217 Pfam PF00196 Bacterial regulatory proteins, luxR family 150 196 1.5E-10 T 01-11-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 CDA09_19880 b29198d73f07e425a083e3c75f0bb25c 217 SUPERFAMILY SSF46894 132 199 3.03E-13 T 01-11-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 CDA09_19880 b29198d73f07e425a083e3c75f0bb25c 217 ProSitePatterns PS00622 LuxR-type HTH domain signature. 165 192 - T 01-11-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 CDA09_19880 b29198d73f07e425a083e3c75f0bb25c 217 SMART SM00421 148 205 5.0E-9 T 01-11-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 CDA09_19880 b29198d73f07e425a083e3c75f0bb25c 217 SMART SM00448 3 116 5.8E-28 T 01-11-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 CDA09_19880 b29198d73f07e425a083e3c75f0bb25c 217 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 165 181 4.7E-6 T 01-11-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 CDA09_19880 b29198d73f07e425a083e3c75f0bb25c 217 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 181 193 4.7E-6 T 01-11-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 CDA09_19880 b29198d73f07e425a083e3c75f0bb25c 217 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 151 165 4.7E-6 T 01-11-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 CDA09_19880 b29198d73f07e425a083e3c75f0bb25c 217 SUPERFAMILY SSF52172 3 134 8.82E-33 T 01-11-2018 IPR011006 CheY-like superfamily CDA09_19880 b29198d73f07e425a083e3c75f0bb25c 217 Pfam PF00072 Response regulator receiver domain 5 116 3.3E-25 T 01-11-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 CDA09_19880 b29198d73f07e425a083e3c75f0bb25c 217 Gene3D G3DSA:3.40.50.12740 3 208 5.7E-55 T 01-11-2018 CDA09_14825 6032d2552466c4abe54e6fc16103362a 653 SUPERFAMILY SSF54675 205 335 2.24E-46 T 01-11-2018 CDA09_14825 6032d2552466c4abe54e6fc16103362a 653 Gene3D G3DSA:3.20.140.10 209 575 3.8E-126 T 01-11-2018 CDA09_14825 6032d2552466c4abe54e6fc16103362a 653 Pfam PF00857 Isochorismatase family 15 194 2.5E-37 T 01-11-2018 IPR000868 Isochorismatase-like GO:0003824 CDA09_14825 6032d2552466c4abe54e6fc16103362a 653 Pfam PF04095 Nicotinate phosphoribosyltransferase (NAPRTase) family 353 532 3.2E-7 T 01-11-2018 IPR007229 Nicotinate phosphoribosyltransferase family KEGG: 00760+6.3.4.21|MetaCyc: PWY-5381|Reactome: R-HSA-197264 CDA09_14825 6032d2552466c4abe54e6fc16103362a 653 SUPERFAMILY SSF52499 14 197 8.11E-54 T 01-11-2018 IPR036380 Isochorismatase-like superfamily GO:0003824 CDA09_14825 6032d2552466c4abe54e6fc16103362a 653 TIGRFAM TIGR01513 NAPRTase_put: nicotinate phosphoribosyltransferase 208 632 1.2E-145 T 01-11-2018 IPR006405 Nicotinate phosphoribosyltransferase pncB-type GO:0004516|GO:0019358 KEGG: 00760+6.3.4.21|MetaCyc: PWY-5381|Reactome: R-HSA-197264|Reactome: R-HSA-6798695 CDA09_14825 6032d2552466c4abe54e6fc16103362a 653 Gene3D G3DSA:3.40.50.850 11 199 1.1E-63 T 01-11-2018 IPR036380 Isochorismatase-like superfamily GO:0003824 CDA09_14825 6032d2552466c4abe54e6fc16103362a 653 SUPERFAMILY SSF51690 337 639 3.09E-95 T 01-11-2018 IPR036068 Nicotinate phosphoribosyltransferase-like, C-terminal GO:0004514|GO:0009435 KEGG: 00760+6.3.4.21|MetaCyc: PWY-5381 CDA09_14825 6032d2552466c4abe54e6fc16103362a 653 Gene3D G3DSA:3.20.20.70 349 517 3.8E-126 T 01-11-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 CDA09_02580 07b4314469cd3f7fa172effbd82bdf55 220 Gene3D G3DSA:3.40.50.300 7 208 8.2E-8 T 01-11-2018 CDA09_02580 07b4314469cd3f7fa172effbd82bdf55 220 SUPERFAMILY SSF52540 9 217 6.13E-15 T 01-11-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CDA09_02580 07b4314469cd3f7fa172effbd82bdf55 220 Pfam PF03567 Sulfotransferase family 6 215 1.5E-12 T 01-11-2018 IPR005331 Sulfotransferase GO:0008146|GO:0016021 CDA09_15455 33f001eb4c88ac36829d2deb5f6f37b0 154 ProSitePatterns PS00903 Cytidine and deoxycytidylate deaminases zinc-binding region signature. 52 90 - T 01-11-2018 IPR016192 APOBEC/CMP deaminase, zinc-binding GO:0008270|GO:0016787 CDA09_15455 33f001eb4c88ac36829d2deb5f6f37b0 154 SUPERFAMILY SSF53927 3 148 1.36E-56 T 01-11-2018 IPR016193 Cytidine deaminase-like GO:0003824 CDA09_15455 33f001eb4c88ac36829d2deb5f6f37b0 154 Pfam PF14437 MafB19-like deaminase 1 147 2.2E-30 T 01-11-2018 IPR028883 tRNA-specific adenosine deaminase GO:0002100|GO:0008251 Reactome: R-HSA-6782315 CDA09_15455 33f001eb4c88ac36829d2deb5f6f37b0 154 Gene3D G3DSA:3.40.140.10 1 152 1.1E-61 T 01-11-2018 CDA09_15455 33f001eb4c88ac36829d2deb5f6f37b0 154 Hamap MF_00972 tRNA-specific adenosine deaminase [tadA]. 7 148 47.333 T 01-11-2018 IPR028883 tRNA-specific adenosine deaminase GO:0002100|GO:0008251 Reactome: R-HSA-6782315 CDA09_05665 aff7e787d691bb7da27f020db4673afe 562 Pfam PF13193 AMP-binding enzyme C-terminal domain 465 540 9.6E-19 T 01-11-2018 IPR025110 AMP-binding enzyme, C-terminal domain CDA09_05665 aff7e787d691bb7da27f020db4673afe 562 Gene3D G3DSA:3.40.50.12780 17 451 2.4E-119 T 01-11-2018 CDA09_05665 aff7e787d691bb7da27f020db4673afe 562 ProSitePatterns PS00455 Putative AMP-binding domain signature. 206 217 - T 01-11-2018 IPR020845 AMP-binding, conserved site CDA09_05665 aff7e787d691bb7da27f020db4673afe 562 Pfam PF00501 AMP-binding enzyme 24 456 8.1E-108 T 01-11-2018 IPR000873 AMP-dependent synthetase/ligase GO:0003824 CDA09_05665 aff7e787d691bb7da27f020db4673afe 562 SUPERFAMILY SSF56801 18 551 1.44E-158 T 01-11-2018 CDA09_05665 aff7e787d691bb7da27f020db4673afe 562 Gene3D G3DSA:3.30.300.30 452 556 9.0E-34 T 01-11-2018 CDA09_07810 53f2d7d9b65eaba4b1c6614763f30306 160 ProSitePatterns PS00763 Glutathione peroxidases signature 2. 61 68 - T 01-11-2018 IPR029760 Glutathione peroxidase conserved site Reactome: R-HSA-3299685 CDA09_07810 53f2d7d9b65eaba4b1c6614763f30306 160 PIRSF PIRSF000303 1 160 2.7E-67 T 01-11-2018 IPR000889 Glutathione peroxidase GO:0004602|GO:0006979|GO:0055114 Reactome: R-HSA-3299685 CDA09_07810 53f2d7d9b65eaba4b1c6614763f30306 160 Gene3D G3DSA:3.40.30.10 1 160 3.2E-67 T 01-11-2018 CDA09_07810 53f2d7d9b65eaba4b1c6614763f30306 160 Pfam PF00255 Glutathione peroxidase 8 112 9.3E-41 T 01-11-2018 IPR000889 Glutathione peroxidase GO:0004602|GO:0006979|GO:0055114 Reactome: R-HSA-3299685 CDA09_07810 53f2d7d9b65eaba4b1c6614763f30306 160 ProSitePatterns PS00460 Glutathione peroxidases active site. 25 40 - T 01-11-2018 IPR029759 Glutathione peroxidase active site Reactome: R-HSA-3299685 CDA09_07810 53f2d7d9b65eaba4b1c6614763f30306 160 SUPERFAMILY SSF52833 6 160 1.69E-60 T 01-11-2018 IPR036249 Thioredoxin-like superfamily CDA09_07810 53f2d7d9b65eaba4b1c6614763f30306 160 PRINTS PR01011 Glutathione peroxidase family signature 58 74 1.2E-21 T 01-11-2018 IPR000889 Glutathione peroxidase GO:0004602|GO:0006979|GO:0055114 Reactome: R-HSA-3299685 CDA09_07810 53f2d7d9b65eaba4b1c6614763f30306 160 PRINTS PR01011 Glutathione peroxidase family signature 124 133 1.2E-21 T 01-11-2018 IPR000889 Glutathione peroxidase GO:0004602|GO:0006979|GO:0055114 Reactome: R-HSA-3299685 CDA09_07810 53f2d7d9b65eaba4b1c6614763f30306 160 PRINTS PR01011 Glutathione peroxidase family signature 23 40 1.2E-21 T 01-11-2018 IPR000889 Glutathione peroxidase GO:0004602|GO:0006979|GO:0055114 Reactome: R-HSA-3299685 CDA09_04400 76c042033f9043e485f7aaf6ddd6493a 141 SMART SM00562 3 140 4.3E-82 T 01-11-2018 IPR034907 Nucleoside diphosphate kinase-like domain KEGG: 00230+2.7.4.6|KEGG: 00240+2.7.4.6|KEGG: 00983+2.7.4.6|MetaCyc: PWY-6545|MetaCyc: PWY-7176|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7205|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7221|MetaCyc: PWY-7222|MetaCyc: PWY-7224|MetaCyc: PWY-7226|MetaCyc: PWY-7227 CDA09_04400 76c042033f9043e485f7aaf6ddd6493a 141 SUPERFAMILY SSF54919 1 137 8.12E-58 T 01-11-2018 IPR036850 Nucleoside diphosphate kinase-like domain superfamily KEGG: 00230+2.7.4.6|KEGG: 00240+2.7.4.6|KEGG: 00983+2.7.4.6|MetaCyc: PWY-6545|MetaCyc: PWY-7176|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7205|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7221|MetaCyc: PWY-7222|MetaCyc: PWY-7224|MetaCyc: PWY-7226|MetaCyc: PWY-7227 CDA09_04400 76c042033f9043e485f7aaf6ddd6493a 141 ProSitePatterns PS00469 Nucleoside diphosphate kinases active site. 114 122 - T 01-11-2018 IPR023005 Nucleoside diphosphate kinase, active site KEGG: 00230+2.7.4.6|KEGG: 00240+2.7.4.6|KEGG: 00983+2.7.4.6|MetaCyc: PWY-6545|MetaCyc: PWY-7176|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7205|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7221|MetaCyc: PWY-7222|MetaCyc: PWY-7224|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: R-HSA-499943 CDA09_04400 76c042033f9043e485f7aaf6ddd6493a 141 Pfam PF00334 Nucleoside diphosphate kinase 4 135 4.9E-55 T 01-11-2018 IPR034907 Nucleoside diphosphate kinase-like domain KEGG: 00230+2.7.4.6|KEGG: 00240+2.7.4.6|KEGG: 00983+2.7.4.6|MetaCyc: PWY-6545|MetaCyc: PWY-7176|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7205|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7221|MetaCyc: PWY-7222|MetaCyc: PWY-7224|MetaCyc: PWY-7226|MetaCyc: PWY-7227 CDA09_04400 76c042033f9043e485f7aaf6ddd6493a 141 Gene3D G3DSA:3.30.70.141 1 141 7.0E-60 T 01-11-2018 IPR036850 Nucleoside diphosphate kinase-like domain superfamily KEGG: 00230+2.7.4.6|KEGG: 00240+2.7.4.6|KEGG: 00983+2.7.4.6|MetaCyc: PWY-6545|MetaCyc: PWY-7176|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7205|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7221|MetaCyc: PWY-7222|MetaCyc: PWY-7224|MetaCyc: PWY-7226|MetaCyc: PWY-7227 CDA09_04400 76c042033f9043e485f7aaf6ddd6493a 141 PRINTS PR01243 Nucleoside diphosphate kinase signature 70 87 1.8E-39 T 01-11-2018 IPR001564 Nucleoside diphosphate kinase GO:0004550|GO:0006165|GO:0006183|GO:0006228|GO:0006241 KEGG: 00230+2.7.4.6|KEGG: 00240+2.7.4.6|KEGG: 00983+2.7.4.6|MetaCyc: PWY-6545|MetaCyc: PWY-7176|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7205|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7221|MetaCyc: PWY-7222|MetaCyc: PWY-7224|MetaCyc: PWY-7226|MetaCyc: PWY-7227 CDA09_04400 76c042033f9043e485f7aaf6ddd6493a 141 PRINTS PR01243 Nucleoside diphosphate kinase signature 114 133 1.8E-39 T 01-11-2018 IPR001564 Nucleoside diphosphate kinase GO:0004550|GO:0006165|GO:0006183|GO:0006228|GO:0006241 KEGG: 00230+2.7.4.6|KEGG: 00240+2.7.4.6|KEGG: 00983+2.7.4.6|MetaCyc: PWY-6545|MetaCyc: PWY-7176|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7205|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7221|MetaCyc: PWY-7222|MetaCyc: PWY-7224|MetaCyc: PWY-7226|MetaCyc: PWY-7227 CDA09_04400 76c042033f9043e485f7aaf6ddd6493a 141 PRINTS PR01243 Nucleoside diphosphate kinase signature 6 28 1.8E-39 T 01-11-2018 IPR001564 Nucleoside diphosphate kinase GO:0004550|GO:0006165|GO:0006183|GO:0006228|GO:0006241 KEGG: 00230+2.7.4.6|KEGG: 00240+2.7.4.6|KEGG: 00983+2.7.4.6|MetaCyc: PWY-6545|MetaCyc: PWY-7176|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7205|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7221|MetaCyc: PWY-7222|MetaCyc: PWY-7224|MetaCyc: PWY-7226|MetaCyc: PWY-7227 CDA09_04400 76c042033f9043e485f7aaf6ddd6493a 141 PRINTS PR01243 Nucleoside diphosphate kinase signature 91 107 1.8E-39 T 01-11-2018 IPR001564 Nucleoside diphosphate kinase GO:0004550|GO:0006165|GO:0006183|GO:0006228|GO:0006241 KEGG: 00230+2.7.4.6|KEGG: 00240+2.7.4.6|KEGG: 00983+2.7.4.6|MetaCyc: PWY-6545|MetaCyc: PWY-7176|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7205|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7221|MetaCyc: PWY-7222|MetaCyc: PWY-7224|MetaCyc: PWY-7226|MetaCyc: PWY-7227 CDA09_04400 76c042033f9043e485f7aaf6ddd6493a 141 PRINTS PR01243 Nucleoside diphosphate kinase signature 50 69 1.8E-39 T 01-11-2018 IPR001564 Nucleoside diphosphate kinase GO:0004550|GO:0006165|GO:0006183|GO:0006228|GO:0006241 KEGG: 00230+2.7.4.6|KEGG: 00240+2.7.4.6|KEGG: 00983+2.7.4.6|MetaCyc: PWY-6545|MetaCyc: PWY-7176|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7205|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7221|MetaCyc: PWY-7222|MetaCyc: PWY-7224|MetaCyc: PWY-7226|MetaCyc: PWY-7227 CDA09_04400 76c042033f9043e485f7aaf6ddd6493a 141 Hamap MF_00451 Nucleoside diphosphate kinase [ndk]. 3 138 34.9 T 01-11-2018 IPR001564 Nucleoside diphosphate kinase GO:0004550|GO:0006165|GO:0006183|GO:0006228|GO:0006241 KEGG: 00230+2.7.4.6|KEGG: 00240+2.7.4.6|KEGG: 00983+2.7.4.6|MetaCyc: PWY-6545|MetaCyc: PWY-7176|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7205|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7221|MetaCyc: PWY-7222|MetaCyc: PWY-7224|MetaCyc: PWY-7226|MetaCyc: PWY-7227 CDA09_10955 8c2928c2e42ca450896e844b1ff9cfb4 212 Gene3D G3DSA:3.40.30.10 4 80 1.4E-28 T 01-11-2018 CDA09_10955 8c2928c2e42ca450896e844b1ff9cfb4 212 TIGRFAM TIGR01262 maiA: maleylacetoacetate isomerase 4 211 1.4E-89 T 01-11-2018 IPR005955 Glutathione S-transferases, class Zeta GO:0003824|GO:0005737|GO:0009072 Reactome: R-HSA-156590|Reactome: R-HSA-204174|Reactome: R-HSA-71182 CDA09_10955 8c2928c2e42ca450896e844b1ff9cfb4 212 SUPERFAMILY SSF52833 3 84 5.08E-27 T 01-11-2018 IPR036249 Thioredoxin-like superfamily CDA09_10955 8c2928c2e42ca450896e844b1ff9cfb4 212 Pfam PF13410 Glutathione S-transferase, C-terminal domain 136 174 2.7E-7 T 01-11-2018 CDA09_10955 8c2928c2e42ca450896e844b1ff9cfb4 212 Pfam PF02798 Glutathione S-transferase, N-terminal domain 4 75 4.6E-19 T 01-11-2018 IPR004045 Glutathione S-transferase, N-terminal GO:0005515 CDA09_10955 8c2928c2e42ca450896e844b1ff9cfb4 212 Gene3D G3DSA:1.20.1050.10 84 212 3.3E-52 T 01-11-2018 CDA09_10955 8c2928c2e42ca450896e844b1ff9cfb4 212 SUPERFAMILY SSF47616 81 211 4.26E-33 T 01-11-2018 IPR036282 Glutathione S-transferase, C-terminal domain superfamily CDA09_05525 52efd313c77ce6e6bcc89e127a455782 174 Pfam PF08750 CNP1-like family 30 163 1.9E-46 T 01-11-2018 IPR014861 Uncharacterised domain CNP1 CDA09_12095 52e53d3c27fe59ed81612a0ec9847cfc 248 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 154 173 6.0E-14 T 01-11-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CDA09_12095 52e53d3c27fe59ed81612a0ec9847cfc 248 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 81 92 6.0E-14 T 01-11-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CDA09_12095 52e53d3c27fe59ed81612a0ec9847cfc 248 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 134 142 6.0E-14 T 01-11-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CDA09_12095 52e53d3c27fe59ed81612a0ec9847cfc 248 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 141 169 - T 01-11-2018 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 CDA09_12095 52e53d3c27fe59ed81612a0ec9847cfc 248 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 175 192 7.1E-43 T 01-11-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CDA09_12095 52e53d3c27fe59ed81612a0ec9847cfc 248 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 7 24 7.1E-43 T 01-11-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CDA09_12095 52e53d3c27fe59ed81612a0ec9847cfc 248 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 81 92 7.1E-43 T 01-11-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CDA09_12095 52e53d3c27fe59ed81612a0ec9847cfc 248 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 154 173 7.1E-43 T 01-11-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CDA09_12095 52e53d3c27fe59ed81612a0ec9847cfc 248 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 128 144 7.1E-43 T 01-11-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CDA09_12095 52e53d3c27fe59ed81612a0ec9847cfc 248 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 209 229 7.1E-43 T 01-11-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CDA09_12095 52e53d3c27fe59ed81612a0ec9847cfc 248 Gene3D G3DSA:3.40.50.720 2 247 1.6E-85 T 01-11-2018 CDA09_12095 52e53d3c27fe59ed81612a0ec9847cfc 248 SUPERFAMILY SSF51735 4 247 4.76E-86 T 01-11-2018 IPR036291 NAD(P)-binding domain superfamily CDA09_12095 52e53d3c27fe59ed81612a0ec9847cfc 248 SMART SM00822 This enzymatic domain is part of bacterial polyketide synthases and catalyses the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain. It uses NADPH to reduce the keto group to a hydroxy group. 6 185 1.2E-4 T 01-11-2018 CDA09_12095 52e53d3c27fe59ed81612a0ec9847cfc 248 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 12 246 8.7E-67 T 01-11-2018 CDA09_04915 b3ad60feb5e8ad68647adcb90da3bad5 637 Hamap MF_00065 Adenylyl-sulfate kinase [cysC]. 465 637 39.865 T 01-11-2018 IPR002891 Adenylyl-sulfate kinase GO:0000103|GO:0004020|GO:0005524 KEGG: 00230+2.7.1.25|KEGG: 00920+2.7.1.25|MetaCyc: PWY-5340|Reactome: R-HSA-174362|Reactome: R-HSA-2408550 CDA09_04915 b3ad60feb5e8ad68647adcb90da3bad5 637 Gene3D G3DSA:2.40.30.10 335 438 2.7E-31 T 01-11-2018 CDA09_04915 b3ad60feb5e8ad68647adcb90da3bad5 637 TIGRFAM TIGR00455 apsK: adenylyl-sulfate kinase 454 632 4.0E-80 T 01-11-2018 IPR002891 Adenylyl-sulfate kinase GO:0000103|GO:0004020|GO:0005524 KEGG: 00230+2.7.1.25|KEGG: 00920+2.7.1.25|MetaCyc: PWY-5340|Reactome: R-HSA-174362|Reactome: R-HSA-2408550 CDA09_04915 b3ad60feb5e8ad68647adcb90da3bad5 637 PRINTS PR00315 GTP-binding elongation factor signature 115 125 2.1E-13 T 01-11-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 CDA09_04915 b3ad60feb5e8ad68647adcb90da3bad5 637 PRINTS PR00315 GTP-binding elongation factor signature 95 103 2.1E-13 T 01-11-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 CDA09_04915 b3ad60feb5e8ad68647adcb90da3bad5 637 PRINTS PR00315 GTP-binding elongation factor signature 168 177 2.1E-13 T 01-11-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 CDA09_04915 b3ad60feb5e8ad68647adcb90da3bad5 637 PRINTS PR00315 GTP-binding elongation factor signature 131 142 2.1E-13 T 01-11-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 CDA09_04915 b3ad60feb5e8ad68647adcb90da3bad5 637 PRINTS PR00315 GTP-binding elongation factor signature 34 47 2.1E-13 T 01-11-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 CDA09_04915 b3ad60feb5e8ad68647adcb90da3bad5 637 Pfam PF01583 Adenylylsulphate kinase 466 620 3.5E-73 T 01-11-2018 CDA09_04915 b3ad60feb5e8ad68647adcb90da3bad5 637 Pfam PF00009 Elongation factor Tu GTP binding domain 32 218 7.6E-41 T 01-11-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 CDA09_04915 b3ad60feb5e8ad68647adcb90da3bad5 637 SUPERFAMILY SSF52540 462 634 2.35E-38 T 01-11-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CDA09_04915 b3ad60feb5e8ad68647adcb90da3bad5 637 Hamap MF_00062 Sulfate adenylyltransferase subunit 1 [cysN]. 24 492 49.086 T 01-11-2018 IPR011779 Sulphate adenylyltransferase, large subunit GO:0006790 KEGG: 00230+2.7.7.4|KEGG: 00261+2.7.7.4|KEGG: 00450+2.7.7.4|KEGG: 00920+2.7.7.4|MetaCyc: PWY-5278|MetaCyc: PWY-5340|MetaCyc: PWY-6683|MetaCyc: PWY-6932 CDA09_04915 b3ad60feb5e8ad68647adcb90da3bad5 637 Gene3D G3DSA:2.40.30.10 246 332 5.3E-20 T 01-11-2018 CDA09_04915 b3ad60feb5e8ad68647adcb90da3bad5 637 SUPERFAMILY SSF52540 28 240 2.6E-55 T 01-11-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CDA09_04915 b3ad60feb5e8ad68647adcb90da3bad5 637 TIGRFAM TIGR02034 CysN: sulfate adenylyltransferase, large subunit 33 437 4.2E-190 T 01-11-2018 IPR011779 Sulphate adenylyltransferase, large subunit GO:0006790 KEGG: 00230+2.7.7.4|KEGG: 00261+2.7.7.4|KEGG: 00450+2.7.7.4|KEGG: 00920+2.7.7.4|MetaCyc: PWY-5278|MetaCyc: PWY-5340|MetaCyc: PWY-6683|MetaCyc: PWY-6932 CDA09_04915 b3ad60feb5e8ad68647adcb90da3bad5 637 Gene3D G3DSA:3.40.50.300 12 243 1.3E-68 T 01-11-2018 CDA09_04915 b3ad60feb5e8ad68647adcb90da3bad5 637 SUPERFAMILY SSF50465 335 438 1.49E-30 T 01-11-2018 IPR009001 Translation elongation factor EF1A/initiation factor IF2gamma, C-terminal CDA09_04915 b3ad60feb5e8ad68647adcb90da3bad5 637 Gene3D G3DSA:3.40.50.300 443 637 2.1E-80 T 01-11-2018 CDA09_04915 b3ad60feb5e8ad68647adcb90da3bad5 637 ProSitePatterns PS00301 Translational (tr)-type guanine nucleotide-binding (G) domain signature. 88 103 - T 01-11-2018 IPR031157 Tr-type G domain, conserved site CDA09_04915 b3ad60feb5e8ad68647adcb90da3bad5 637 SUPERFAMILY SSF50447 246 333 9.28E-19 T 01-11-2018 IPR009000 Translation protein, beta-barrel domain superfamily CDA09_01550 20f81414805d83789049d7842318a78a 416 SUPERFAMILY SSF53756 38 399 5.49E-55 T 01-11-2018 CDA09_01550 20f81414805d83789049d7842318a78a 416 Pfam PF01075 Glycosyltransferase family 9 (heptosyltransferase) 108 370 4.5E-26 T 01-11-2018 IPR002201 Glycosyl transferase, family 9 GO:0016757 CDA09_01550 20f81414805d83789049d7842318a78a 416 Gene3D G3DSA:3.40.50.2000 218 401 9.3E-39 T 01-11-2018 CDA09_01550 20f81414805d83789049d7842318a78a 416 Gene3D G3DSA:3.40.50.2000 33 187 3.4E-9 T 01-11-2018 CDA09_15625 4bb916112d88c37e3f0f7b91d450839d 104 SUPERFAMILY SSF54909 5 104 2.1E-29 T 01-11-2018 IPR011008 Dimeric alpha-beta barrel CDA09_15625 4bb916112d88c37e3f0f7b91d450839d 104 Pfam PF03992 Antibiotic biosynthesis monooxygenase 12 81 3.5E-6 T 01-11-2018 IPR007138 Antibiotic biosynthesis monooxygenase domain CDA09_15625 4bb916112d88c37e3f0f7b91d450839d 104 Gene3D G3DSA:3.30.70.100 10 99 3.7E-34 T 01-11-2018 CDA09_08780 35243746b8abeb444e70e48319c1a8af 351 SMART SM00342 249 331 1.9E-20 T 01-11-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 CDA09_08780 35243746b8abeb444e70e48319c1a8af 351 Pfam PF12625 Arabinose-binding domain of AraC transcription regulator, N-term 28 206 9.1E-32 T 01-11-2018 IPR032687 HTH-type transcriptional regulator AraC-type, N-terminal CDA09_08780 35243746b8abeb444e70e48319c1a8af 351 Gene3D G3DSA:1.10.10.60 228 339 8.7E-26 T 01-11-2018 CDA09_08780 35243746b8abeb444e70e48319c1a8af 351 SUPERFAMILY SSF46689 284 335 9.86E-12 T 01-11-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 CDA09_08780 35243746b8abeb444e70e48319c1a8af 351 Pfam PF12833 Helix-turn-helix domain 255 333 4.9E-18 T 01-11-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 CDA09_23030 89913717c9e41bbc6f8c107595a82333 69 ProDom PD004225 UPF0161 ALPHA-HEMOLYSIN YIDD UNCHARACTERIZED CYTOSOLIC PRECURSOR SIGNAL YTJA RNPA SIMILAR 16 68 4.0E-23 T 01-11-2018 IPR002696 Putative membrane protein insertion efficiency factor CDA09_23030 89913717c9e41bbc6f8c107595a82333 69 Pfam PF01809 Haemolytic domain 3 68 7.4E-31 T 01-11-2018 IPR002696 Putative membrane protein insertion efficiency factor CDA09_23030 89913717c9e41bbc6f8c107595a82333 69 Hamap MF_00386 Putative membrane protein insertion efficiency factor [yidD]. 1 69 24.917 T 01-11-2018 IPR002696 Putative membrane protein insertion efficiency factor CDA09_23030 89913717c9e41bbc6f8c107595a82333 69 SMART SM01234 1 68 2.2E-47 T 01-11-2018 IPR002696 Putative membrane protein insertion efficiency factor CDA09_23030 89913717c9e41bbc6f8c107595a82333 69 TIGRFAM TIGR00278 TIGR00278: putative membrane protein insertion efficiency factor 5 69 5.2E-27 T 01-11-2018 IPR002696 Putative membrane protein insertion efficiency factor CDA09_10440 38849aefc22abe0001eea1f397412d39 265 Pfam PF01557 Fumarylacetoacetate (FAA) hydrolase family 91 258 7.0E-9 T 01-11-2018 IPR011234 Fumarylacetoacetase-like, C-terminal GO:0003824 CDA09_10440 38849aefc22abe0001eea1f397412d39 265 SUPERFAMILY SSF56529 1 259 1.7E-75 T 01-11-2018 IPR036663 Fumarylacetoacetase-like, C-terminal domain superfamily GO:0003824 CDA09_10440 38849aefc22abe0001eea1f397412d39 265 TIGRFAM TIGR03220 catechol_dmpE: 2-oxopent-4-enoate hydratase 5 259 1.2E-133 T 01-11-2018 IPR017632 2-oxopent-4-enoate hydratase CDA09_10440 38849aefc22abe0001eea1f397412d39 265 Gene3D G3DSA:3.90.850.10 1 260 1.6E-78 T 01-11-2018 IPR036663 Fumarylacetoacetase-like, C-terminal domain superfamily GO:0003824 CDA09_12975 997fabb10747f55c8cf1b8742d952ae6 128 Gene3D G3DSA:1.20.1300.10 2 126 3.6E-31 T 01-11-2018 IPR034804 Fumarate reductase/succinate dehydrogenase, transmembrane subunit GO:0016020 Reactome: R-HSA-611105|Reactome: R-HSA-71403 CDA09_12975 997fabb10747f55c8cf1b8742d952ae6 128 ProSitePatterns PS01001 Succinate dehydrogenase cytochrome b subunit signature 2. 83 96 - T 01-11-2018 IPR018495 Succinate dehydrogenase, cytochrome b subunit, conserved site GO:0000104|GO:0006099|GO:0009055|GO:0016020 Reactome: R-HSA-611105|Reactome: R-HSA-71403 CDA09_12975 997fabb10747f55c8cf1b8742d952ae6 128 Pfam PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit 9 120 3.2E-27 T 01-11-2018 IPR000701 Succinate dehydrogenase/fumarate reductase type B, transmembrane subunit GO:0016627 Reactome: R-HSA-611105|Reactome: R-HSA-71403 CDA09_12975 997fabb10747f55c8cf1b8742d952ae6 128 SUPERFAMILY SSF81343 8 125 2.78E-28 T 01-11-2018 IPR034804 Fumarate reductase/succinate dehydrogenase, transmembrane subunit GO:0016020 Reactome: R-HSA-611105|Reactome: R-HSA-71403 CDA09_12975 997fabb10747f55c8cf1b8742d952ae6 128 TIGRFAM TIGR02970 succ_dehyd_cytB: succinate dehydrogenase, cytochrome b556 subunit 8 122 1.4E-35 T 01-11-2018 IPR014314 Succinate dehydrogenase, cytochrome b556 subunit GO:0000104|GO:0006099|GO:0045281 Reactome: R-HSA-611105|Reactome: R-HSA-71403 CDA09_12975 997fabb10747f55c8cf1b8742d952ae6 128 PIRSF PIRSF000178 5 126 3.1E-24 T 01-11-2018 IPR014314 Succinate dehydrogenase, cytochrome b556 subunit GO:0000104|GO:0006099|GO:0045281 Reactome: R-HSA-611105|Reactome: R-HSA-71403 CDA09_21475 9bb21d9a7e36bc6e023bd38d20e373fb 458 Gene3D G3DSA:3.90.380.10 33 448 1.4E-164 T 01-11-2018 CDA09_21475 9bb21d9a7e36bc6e023bd38d20e373fb 458 Pfam PF00848 Ring hydroxylating alpha subunit (catalytic domain) 185 450 1.0E-48 T 01-11-2018 IPR015879 Aromatic-ring-hydroxylating dioxygenase, alpha subunit, C-terminal domain GO:0005506|GO:0044237|GO:0051537|GO:0055114 CDA09_21475 9bb21d9a7e36bc6e023bd38d20e373fb 458 SUPERFAMILY SSF55961 180 456 7.14E-70 T 01-11-2018 CDA09_21475 9bb21d9a7e36bc6e023bd38d20e373fb 458 ProSitePatterns PS00570 Bacterial ring hydroxylating dioxygenases alpha-subunit signature. 100 123 - T 01-11-2018 IPR015881 Aromatic-ring-hydroxylating dioxygenase, 2Fe-2S-binding site GO:0005506|GO:0051537|GO:0055114 CDA09_21475 9bb21d9a7e36bc6e023bd38d20e373fb 458 Pfam PF00355 Rieske [2Fe-2S] domain 57 141 6.1E-21 T 01-11-2018 IPR017941 Rieske [2Fe-2S] iron-sulphur domain GO:0016491|GO:0051537|GO:0055114 CDA09_21475 9bb21d9a7e36bc6e023bd38d20e373fb 458 Gene3D G3DSA:2.102.10.10 57 187 1.4E-164 T 01-11-2018 IPR036922 Rieske [2Fe-2S] iron-sulphur domain superfamily GO:0016491|GO:0051537|GO:0055114 CDA09_21475 9bb21d9a7e36bc6e023bd38d20e373fb 458 PRINTS PR00090 Ring hydroxylating dioxygenase alpha-subunit signature 42 67 1.4E-64 T 01-11-2018 IPR001663 Aromatic-ring-hydroxylating dioxygenase, alpha subunit GO:0044237|GO:0051537|GO:0055114 CDA09_21475 9bb21d9a7e36bc6e023bd38d20e373fb 458 PRINTS PR00090 Ring hydroxylating dioxygenase alpha-subunit signature 72 87 1.4E-64 T 01-11-2018 IPR001663 Aromatic-ring-hydroxylating dioxygenase, alpha subunit GO:0044237|GO:0051537|GO:0055114 CDA09_21475 9bb21d9a7e36bc6e023bd38d20e373fb 458 PRINTS PR00090 Ring hydroxylating dioxygenase alpha-subunit signature 204 226 1.4E-64 T 01-11-2018 IPR001663 Aromatic-ring-hydroxylating dioxygenase, alpha subunit GO:0044237|GO:0051537|GO:0055114 CDA09_21475 9bb21d9a7e36bc6e023bd38d20e373fb 458 PRINTS PR00090 Ring hydroxylating dioxygenase alpha-subunit signature 93 113 1.4E-64 T 01-11-2018 IPR001663 Aromatic-ring-hydroxylating dioxygenase, alpha subunit GO:0044237|GO:0051537|GO:0055114 CDA09_21475 9bb21d9a7e36bc6e023bd38d20e373fb 458 PRINTS PR00090 Ring hydroxylating dioxygenase alpha-subunit signature 114 134 1.4E-64 T 01-11-2018 IPR001663 Aromatic-ring-hydroxylating dioxygenase, alpha subunit GO:0044237|GO:0051537|GO:0055114 CDA09_21475 9bb21d9a7e36bc6e023bd38d20e373fb 458 PRINTS PR00090 Ring hydroxylating dioxygenase alpha-subunit signature 163 189 1.4E-64 T 01-11-2018 IPR001663 Aromatic-ring-hydroxylating dioxygenase, alpha subunit GO:0044237|GO:0051537|GO:0055114 CDA09_21475 9bb21d9a7e36bc6e023bd38d20e373fb 458 SUPERFAMILY SSF50022 28 178 3.67E-47 T 01-11-2018 IPR036922 Rieske [2Fe-2S] iron-sulphur domain superfamily GO:0016491|GO:0051537|GO:0055114 CDA09_10145 dc6bc745ea1e3489ad9ed2a5f197b370 813 Pfam PF12729 Four helix bundle sensory module for signal transduction 1 160 9.4E-7 T 01-11-2018 IPR024478 Chemotaxis methyl-accepting receptor HlyB-like, 4HB MCP domain CDA09_10145 dc6bc745ea1e3489ad9ed2a5f197b370 813 Gene3D G3DSA:3.30.565.10 578 754 7.7E-30 T 01-11-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily CDA09_10145 dc6bc745ea1e3489ad9ed2a5f197b370 813 SUPERFAMILY SSF47226 419 505 1.05E-13 T 01-11-2018 IPR036641 HPT domain superfamily GO:0000160 CDA09_10145 dc6bc745ea1e3489ad9ed2a5f197b370 813 SUPERFAMILY SSF55874 603 745 2.33E-23 T 01-11-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily CDA09_10145 dc6bc745ea1e3489ad9ed2a5f197b370 813 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 627 745 8.9E-8 T 01-11-2018 IPR003594 Histidine kinase/HSP90-like ATPase CDA09_10145 dc6bc745ea1e3489ad9ed2a5f197b370 813 SMART SM00304 207 260 3.4E-5 T 01-11-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 CDA09_10145 dc6bc745ea1e3489ad9ed2a5f197b370 813 SMART SM00073 418 512 0.0028 T 01-11-2018 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160 CDA09_10145 dc6bc745ea1e3489ad9ed2a5f197b370 813 Pfam PF01627 Hpt domain 440 510 7.9E-9 T 01-11-2018 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160 CDA09_10145 dc6bc745ea1e3489ad9ed2a5f197b370 813 SMART SM00387 622 769 3.9E-12 T 01-11-2018 IPR003594 Histidine kinase/HSP90-like ATPase CDA09_10145 dc6bc745ea1e3489ad9ed2a5f197b370 813 Gene3D G3DSA:1.20.120.160 413 524 4.3E-12 T 01-11-2018 IPR036641 HPT domain superfamily GO:0000160 CDA09_10145 dc6bc745ea1e3489ad9ed2a5f197b370 813 PRINTS PR00344 Bacterial sensor protein C-terminal signature 707 717 2.2E-5 T 01-11-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 CDA09_10145 dc6bc745ea1e3489ad9ed2a5f197b370 813 PRINTS PR00344 Bacterial sensor protein C-terminal signature 723 741 2.2E-5 T 01-11-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 CDA09_10145 dc6bc745ea1e3489ad9ed2a5f197b370 813 PRINTS PR00344 Bacterial sensor protein C-terminal signature 667 681 2.2E-5 T 01-11-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 CDA09_10145 dc6bc745ea1e3489ad9ed2a5f197b370 813 SUPERFAMILY SSF158472 207 257 1.14E-5 T 01-11-2018 CDA09_10145 dc6bc745ea1e3489ad9ed2a5f197b370 813 Gene3D G3DSA:1.10.287.130 205 315 7.4E-7 T 01-11-2018 CDA09_20620 e39102878b902bb49bfeea739dca11f1 311 TIGRFAM TIGR02039 CysD: sulfate adenylyltransferase, small subunit 12 311 6.1E-124 T 01-11-2018 IPR011784 Sulphate adenylyltransferase, small subunit GO:0004781|GO:0019419 KEGG: 00230+2.7.7.4|KEGG: 00261+2.7.7.4|KEGG: 00450+2.7.7.4|KEGG: 00920+2.7.7.4|MetaCyc: PWY-5278|MetaCyc: PWY-5340|MetaCyc: PWY-6683|MetaCyc: PWY-6932 CDA09_20620 e39102878b902bb49bfeea739dca11f1 311 PIRSF PIRSF002936 3 311 8.2E-137 T 01-11-2018 IPR011784 Sulphate adenylyltransferase, small subunit GO:0004781|GO:0019419 KEGG: 00230+2.7.7.4|KEGG: 00261+2.7.7.4|KEGG: 00450+2.7.7.4|KEGG: 00920+2.7.7.4|MetaCyc: PWY-5278|MetaCyc: PWY-5340|MetaCyc: PWY-6683|MetaCyc: PWY-6932 CDA09_20620 e39102878b902bb49bfeea739dca11f1 311 SUPERFAMILY SSF52402 9 212 2.32E-61 T 01-11-2018 CDA09_20620 e39102878b902bb49bfeea739dca11f1 311 Gene3D G3DSA:3.40.50.620 10 214 1.0E-53 T 01-11-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold CDA09_20620 e39102878b902bb49bfeea739dca11f1 311 Pfam PF01507 Phosphoadenosine phosphosulfate reductase family 32 265 5.6E-44 T 01-11-2018 IPR002500 Phosphoadenosine phosphosulphate reductase GO:0003824 Reactome: R-HSA-196843 CDA09_03045 d0e6a08c7145d2a33e00a437c715f83f 621 Pfam PF00989 PAS fold 34 113 4.4E-7 T 01-11-2018 IPR013767 PAS fold GO:0006355 CDA09_03045 d0e6a08c7145d2a33e00a437c715f83f 621 Gene3D G3DSA:3.30.450.20 264 364 8.0E-7 T 01-11-2018 CDA09_03045 d0e6a08c7145d2a33e00a437c715f83f 621 SUPERFAMILY SSF55785 156 227 8.38E-5 T 01-11-2018 IPR035965 PAS domain superfamily CDA09_03045 d0e6a08c7145d2a33e00a437c715f83f 621 SMART SM00052 369 615 3.2E-64 T 01-11-2018 IPR001633 EAL domain CDA09_03045 d0e6a08c7145d2a33e00a437c715f83f 621 SMART SM00091 32 98 0.0056 T 01-11-2018 IPR000014 PAS domain CDA09_03045 d0e6a08c7145d2a33e00a437c715f83f 621 SMART SM00091 266 334 8.5 T 01-11-2018 IPR000014 PAS domain CDA09_03045 d0e6a08c7145d2a33e00a437c715f83f 621 SMART SM00091 153 219 0.0033 T 01-11-2018 IPR000014 PAS domain CDA09_03045 d0e6a08c7145d2a33e00a437c715f83f 621 SUPERFAMILY SSF141868 374 620 5.89E-67 T 01-11-2018 IPR035919 EAL domain superfamily CDA09_03045 d0e6a08c7145d2a33e00a437c715f83f 621 Pfam PF13188 PAS domain 268 312 0.0019 T 01-11-2018 IPR000014 PAS domain CDA09_03045 d0e6a08c7145d2a33e00a437c715f83f 621 Gene3D G3DSA:3.20.20.450 371 621 4.0E-75 T 01-11-2018 IPR035919 EAL domain superfamily CDA09_03045 d0e6a08c7145d2a33e00a437c715f83f 621 SUPERFAMILY SSF55785 265 364 1.03E-7 T 01-11-2018 IPR035965 PAS domain superfamily CDA09_03045 d0e6a08c7145d2a33e00a437c715f83f 621 Pfam PF00563 EAL domain 376 610 2.0E-57 T 01-11-2018 IPR001633 EAL domain CDA09_03045 d0e6a08c7145d2a33e00a437c715f83f 621 SUPERFAMILY SSF55785 33 118 2.09E-7 T 01-11-2018 IPR035965 PAS domain superfamily CDA09_03045 d0e6a08c7145d2a33e00a437c715f83f 621 Gene3D G3DSA:3.30.450.20 32 122 8.2E-7 T 01-11-2018 CDA09_17815 b09e16034b710cb16099f833f41a5bbe 374 Gene3D G3DSA:1.10.287.90 42 113 2.6E-81 T 01-11-2018 IPR036257 Cytochrome C oxidase subunit II, transmembrane domain superfamily Reactome: R-HSA-5628897|Reactome: R-HSA-611105 CDA09_17815 b09e16034b710cb16099f833f41a5bbe 374 TIGRFAM TIGR02866 CoxB: cytochrome c oxidase, subunit II 32 253 1.7E-59 T 01-11-2018 IPR014222 Cytochrome c oxidase, subunit II GO:0016021|GO:0016491 Reactome: R-HSA-5628897|Reactome: R-HSA-611105 CDA09_17815 b09e16034b710cb16099f833f41a5bbe 374 Pfam PF02790 Cytochrome C oxidase subunit II, transmembrane domain 23 102 3.2E-14 T 01-11-2018 IPR011759 Cytochrome C oxidase subunit II, transmembrane domain GO:0016021|GO:0022900 Reactome: R-HSA-5628897|Reactome: R-HSA-611105 CDA09_17815 b09e16034b710cb16099f833f41a5bbe 374 SUPERFAMILY SSF46626 271 360 4.49E-19 T 01-11-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 CDA09_17815 b09e16034b710cb16099f833f41a5bbe 374 ProSitePatterns PS00078 CO II and nitrous oxide reductase dinuclear copper centers signature. 189 237 - T 01-11-2018 IPR001505 Copper centre Cu(A) GO:0005507 Reactome: R-HSA-5628897|Reactome: R-HSA-611105 CDA09_17815 b09e16034b710cb16099f833f41a5bbe 374 SUPERFAMILY SSF81464 23 112 2.94E-27 T 01-11-2018 IPR036257 Cytochrome C oxidase subunit II, transmembrane domain superfamily Reactome: R-HSA-5628897|Reactome: R-HSA-611105 CDA09_17815 b09e16034b710cb16099f833f41a5bbe 374 Pfam PF00116 Cytochrome C oxidase subunit II, periplasmic domain 118 244 3.5E-36 T 01-11-2018 IPR002429 Cytochrome c oxidase subunit II-like C-terminal GO:0004129|GO:0005507|GO:0016020 Reactome: R-HSA-5628897|Reactome: R-HSA-611105 CDA09_17815 b09e16034b710cb16099f833f41a5bbe 374 Gene3D G3DSA:2.60.40.420 114 253 2.6E-81 T 01-11-2018 IPR008972 Cupredoxin CDA09_17815 b09e16034b710cb16099f833f41a5bbe 374 Gene3D G3DSA:1.10.760.10 257 374 7.7E-29 T 01-11-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 CDA09_17815 b09e16034b710cb16099f833f41a5bbe 374 PRINTS PR01166 Cytochrome c oxidase subunit II signature 92 112 5.0E-37 T 01-11-2018 CDA09_17815 b09e16034b710cb16099f833f41a5bbe 374 PRINTS PR01166 Cytochrome c oxidase subunit II signature 80 92 5.0E-37 T 01-11-2018 CDA09_17815 b09e16034b710cb16099f833f41a5bbe 374 PRINTS PR01166 Cytochrome c oxidase subunit II signature 188 208 5.0E-37 T 01-11-2018 CDA09_17815 b09e16034b710cb16099f833f41a5bbe 374 PRINTS PR01166 Cytochrome c oxidase subunit II signature 226 243 5.0E-37 T 01-11-2018 CDA09_17815 b09e16034b710cb16099f833f41a5bbe 374 PRINTS PR01166 Cytochrome c oxidase subunit II signature 114 133 5.0E-37 T 01-11-2018 CDA09_17815 b09e16034b710cb16099f833f41a5bbe 374 PRINTS PR01166 Cytochrome c oxidase subunit II signature 208 225 5.0E-37 T 01-11-2018 CDA09_17815 b09e16034b710cb16099f833f41a5bbe 374 PRINTS PR01166 Cytochrome c oxidase subunit II signature 164 185 5.0E-37 T 01-11-2018 CDA09_17815 b09e16034b710cb16099f833f41a5bbe 374 SUPERFAMILY SSF49503 110 307 1.52E-51 T 01-11-2018 IPR008972 Cupredoxin CDA09_17815 b09e16034b710cb16099f833f41a5bbe 374 Pfam PF13442 Cytochrome C oxidase, cbb3-type, subunit III 277 350 7.0E-11 T 01-11-2018 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 Reactome: R-HSA-111457|Reactome: R-HSA-111458|Reactome: R-HSA-111459|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 CDA09_21085 32c77113d6e769818212ade87b3631aa 346 SUPERFAMILY SSF56176 17 203 9.81E-42 T 01-11-2018 IPR036318 FAD-binding, type PCMH-like superfamily GO:0050660 CDA09_21085 32c77113d6e769818212ade87b3631aa 346 Pfam PF01565 FAD binding domain 34 162 1.3E-19 T 01-11-2018 IPR006094 FAD linked oxidase, N-terminal GO:0016491|GO:0050660|GO:0055114 CDA09_21085 32c77113d6e769818212ade87b3631aa 346 Pfam PF02873 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain 223 346 4.2E-34 T 01-11-2018 IPR011601 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal GO:0008762|GO:0055114 KEGG: 00520+1.3.1.98|KEGG: 00550+1.3.1.98|MetaCyc: PWY-6386|MetaCyc: PWY-6387|MetaCyc: PWY-7953 CDA09_21085 32c77113d6e769818212ade87b3631aa 346 SUPERFAMILY SSF56194 220 346 1.31E-46 T 01-11-2018 IPR036635 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain superfamily GO:0008762|GO:0055114 KEGG: 00520+1.3.1.98|KEGG: 00550+1.3.1.98|MetaCyc: PWY-6386|MetaCyc: PWY-6387|MetaCyc: PWY-7953 CDA09_21085 32c77113d6e769818212ade87b3631aa 346 TIGRFAM TIGR00179 murB: UDP-N-acetylenolpyruvoylglucosamine reductase 18 342 9.3E-66 T 01-11-2018 IPR003170 UDP-N-acetylenolpyruvoylglucosamine reductase GO:0008762|GO:0055114 KEGG: 00520+1.3.1.98|KEGG: 00550+1.3.1.98|MetaCyc: PWY-6386|MetaCyc: PWY-6387|MetaCyc: PWY-7953 CDA09_21085 32c77113d6e769818212ade87b3631aa 346 Gene3D G3DSA:3.30.43.10 11 78 6.6E-17 T 01-11-2018 IPR016167 FAD-binding, type PCMH, subdomain 1 CDA09_21085 32c77113d6e769818212ade87b3631aa 346 Gene3D G3DSA:3.90.78.10 236 346 7.7E-42 T 01-11-2018 IPR036635 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain superfamily GO:0008762|GO:0055114 KEGG: 00520+1.3.1.98|KEGG: 00550+1.3.1.98|MetaCyc: PWY-6386|MetaCyc: PWY-6387|MetaCyc: PWY-7953 CDA09_21085 32c77113d6e769818212ade87b3631aa 346 Gene3D G3DSA:3.30.465.10 84 235 1.8E-54 T 01-11-2018 IPR016169 FAD-binding, type PCMH, subdomain 2 CDA09_21085 32c77113d6e769818212ade87b3631aa 346 Hamap MF_00037 UDP-N-acetylenolpyruvoylglucosamine reductase [murB]. 1 346 84.265 T 01-11-2018 IPR003170 UDP-N-acetylenolpyruvoylglucosamine reductase GO:0008762|GO:0055114 KEGG: 00520+1.3.1.98|KEGG: 00550+1.3.1.98|MetaCyc: PWY-6386|MetaCyc: PWY-6387|MetaCyc: PWY-7953 CDA09_00440 38e11d867666e6a5364cde1da79bce04 641 Pfam PF13932 GidA associated domain 402 617 1.6E-75 T 01-11-2018 IPR026904 GidA associated domain 3 Reactome: R-HSA-6787450 CDA09_00440 38e11d867666e6a5364cde1da79bce04 641 Hamap MF_00129 tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG [mnmG]. 5 625 42.586 T 01-11-2018 IPR004416 tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG GO:0002098 Reactome: R-HSA-6787450 CDA09_00440 38e11d867666e6a5364cde1da79bce04 641 SMART SM01228 547 618 2.8E-43 T 01-11-2018 CDA09_00440 38e11d867666e6a5364cde1da79bce04 641 SUPERFAMILY SSF51905 7 261 4.33E-50 T 01-11-2018 IPR036188 FAD/NAD(P)-binding domain superfamily CDA09_00440 38e11d867666e6a5364cde1da79bce04 641 TIGRFAM TIGR00136 gidA: tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA 7 623 1.2E-273 T 01-11-2018 IPR004416 tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG GO:0002098 Reactome: R-HSA-6787450 CDA09_00440 38e11d867666e6a5364cde1da79bce04 641 ProSitePatterns PS01281 Glucose inhibited division protein A family signature 2. 368 391 - T 01-11-2018 IPR020595 MnmG-related, conserved site Reactome: R-HSA-6787450 CDA09_00440 38e11d867666e6a5364cde1da79bce04 641 Pfam PF01134 Glucose inhibited division protein A 8 399 3.1E-168 T 01-11-2018 IPR002218 tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG-related GO:0008033|GO:0050660 Reactome: R-HSA-6787450 CDA09_00440 38e11d867666e6a5364cde1da79bce04 641 Gene3D G3DSA:1.10.150.570 570 623 1.4E-23 T 01-11-2018 CDA09_00440 38e11d867666e6a5364cde1da79bce04 641 ProSitePatterns PS01280 Glucose inhibited division protein A family signature 1. 273 287 - T 01-11-2018 IPR020595 MnmG-related, conserved site Reactome: R-HSA-6787450 CDA09_00440 38e11d867666e6a5364cde1da79bce04 641 Gene3D G3DSA:1.10.10.1800 459 551 4.3E-26 T 01-11-2018 CDA09_00440 38e11d867666e6a5364cde1da79bce04 641 Gene3D G3DSA:3.50.50.60 294 458 6.2E-58 T 01-11-2018 IPR036188 FAD/NAD(P)-binding domain superfamily CDA09_00440 38e11d867666e6a5364cde1da79bce04 641 Gene3D G3DSA:3.50.50.60 2 231 1.8E-86 T 01-11-2018 IPR036188 FAD/NAD(P)-binding domain superfamily CDA09_13555 3f2e05ca02fcb15644660ec56e4a61cb 308 Gene3D G3DSA:3.90.180.10 1 302 9.3E-48 T 01-11-2018 CDA09_13555 3f2e05ca02fcb15644660ec56e4a61cb 308 SUPERFAMILY SSF50129 1 133 2.67E-18 T 01-11-2018 IPR011032 GroES-like superfamily CDA09_13555 3f2e05ca02fcb15644660ec56e4a61cb 308 SMART SM00829 10 304 9.0E-6 T 01-11-2018 IPR020843 Polyketide synthase, enoylreductase domain GO:0016491 CDA09_13555 3f2e05ca02fcb15644660ec56e4a61cb 308 SUPERFAMILY SSF51735 103 267 4.53E-30 T 01-11-2018 IPR036291 NAD(P)-binding domain superfamily CDA09_13555 3f2e05ca02fcb15644660ec56e4a61cb 308 Pfam PF00107 Zinc-binding dehydrogenase 140 266 2.7E-19 T 01-11-2018 IPR013149 Alcohol dehydrogenase, C-terminal GO:0055114 CDA09_02385 45ec3d353a7607135e9d294fcb1719a2 172 Pfam PF10001 Uncharacterized protein conserved in bacteria (DUF2242) 53 168 3.0E-43 T 01-11-2018 IPR018718 Protein of unknown function DUF2242 CDA09_16500 cf5e484547fd198cebc5fd924f41f450 150 SMART SM00116 78 125 8.7E-4 T 01-11-2018 IPR000644 CBS domain CDA09_16500 cf5e484547fd198cebc5fd924f41f450 150 SMART SM00116 13 60 5.8E-6 T 01-11-2018 IPR000644 CBS domain CDA09_16500 cf5e484547fd198cebc5fd924f41f450 150 Gene3D G3DSA:3.10.580.10 1 141 1.8E-32 T 01-11-2018 CDA09_16500 cf5e484547fd198cebc5fd924f41f450 150 SUPERFAMILY SSF54631 13 142 6.06E-28 T 01-11-2018 CDA09_16500 cf5e484547fd198cebc5fd924f41f450 150 Pfam PF00571 CBS domain 15 60 1.4E-7 T 01-11-2018 IPR000644 CBS domain CDA09_16500 cf5e484547fd198cebc5fd924f41f450 150 Pfam PF00571 CBS domain 72 125 3.5E-8 T 01-11-2018 IPR000644 CBS domain CDA09_02335 8c931d2375ba86ac3dd10715d00b66c7 465 PRINTS PR00173 Glutamate-aspartate symporter signature 50 70 7.0E-34 T 01-11-2018 CDA09_02335 8c931d2375ba86ac3dd10715d00b66c7 465 PRINTS PR00173 Glutamate-aspartate symporter signature 333 352 7.0E-34 T 01-11-2018 CDA09_02335 8c931d2375ba86ac3dd10715d00b66c7 465 PRINTS PR00173 Glutamate-aspartate symporter signature 9 29 7.0E-34 T 01-11-2018 CDA09_02335 8c931d2375ba86ac3dd10715d00b66c7 465 PRINTS PR00173 Glutamate-aspartate symporter signature 80 105 7.0E-34 T 01-11-2018 CDA09_02335 8c931d2375ba86ac3dd10715d00b66c7 465 PRINTS PR00173 Glutamate-aspartate symporter signature 298 324 7.0E-34 T 01-11-2018 CDA09_02335 8c931d2375ba86ac3dd10715d00b66c7 465 PRINTS PR00173 Glutamate-aspartate symporter signature 151 173 7.0E-34 T 01-11-2018 CDA09_02335 8c931d2375ba86ac3dd10715d00b66c7 465 SUPERFAMILY SSF118215 15 407 4.71E-122 T 01-11-2018 IPR036458 Sodium:dicarboxylate symporter superfamily GO:0015293|GO:0016021 CDA09_02335 8c931d2375ba86ac3dd10715d00b66c7 465 ProSitePatterns PS00714 Sodium:dicarboxylate symporter family signature 2. 301 324 - T 01-11-2018 IPR018107 Sodium:dicarboxylate symporter, conserved site CDA09_02335 8c931d2375ba86ac3dd10715d00b66c7 465 Gene3D G3DSA:1.10.3860.10 2 425 1.4E-123 T 01-11-2018 IPR036458 Sodium:dicarboxylate symporter superfamily GO:0015293|GO:0016021 CDA09_02335 8c931d2375ba86ac3dd10715d00b66c7 465 Hamap MF_01300 C4-dicarboxylate transport protein [dctA]. 8 434 38.068 T 01-11-2018 IPR023954 C4-dicarboxylate transport protein GO:0006835|GO:0015293|GO:0016021 CDA09_02335 8c931d2375ba86ac3dd10715d00b66c7 465 ProSitePatterns PS00713 Sodium:dicarboxylate symporter family signature 1. 42 57 - T 01-11-2018 IPR018107 Sodium:dicarboxylate symporter, conserved site CDA09_02335 8c931d2375ba86ac3dd10715d00b66c7 465 Pfam PF00375 Sodium:dicarboxylate symporter family 15 407 3.2E-110 T 01-11-2018 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 CDA09_16910 52ade5395cf6800bfc1225ec7c0fea67 126 SUPERFAMILY SSF54523 1 118 4.13E-18 T 01-11-2018 CDA09_16910 52ade5395cf6800bfc1225ec7c0fea67 126 Pfam PF16732 Type IV minor pilin ComP, DNA uptake sequence receptor 16 103 3.4E-18 T 01-11-2018 IPR031982 Type IV minor pilin ComP CDA09_16910 52ade5395cf6800bfc1225ec7c0fea67 126 Gene3D G3DSA:3.30.700.10 1 121 1.1E-17 T 01-11-2018 CDA09_22840 43106083a538a91da07d8dfd9b778cf8 542 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 301 330 1.8E-22 T 01-11-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 CDA09_22840 43106083a538a91da07d8dfd9b778cf8 542 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 7 32 1.8E-22 T 01-11-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 CDA09_22840 43106083a538a91da07d8dfd9b778cf8 542 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 407 436 1.8E-22 T 01-11-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 CDA09_22840 43106083a538a91da07d8dfd9b778cf8 542 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 378 405 1.8E-22 T 01-11-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 CDA09_22840 43106083a538a91da07d8dfd9b778cf8 542 Pfam PF17200 Single Cache domain 2 43 186 4.5E-39 T 01-11-2018 IPR033480 Single Cache domain 2 CDA09_22840 43106083a538a91da07d8dfd9b778cf8 542 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 352 508 1.9E-34 T 01-11-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 CDA09_22840 43106083a538a91da07d8dfd9b778cf8 542 Gene3D G3DSA:3.30.450.20 38 186 3.8E-50 T 01-11-2018 CDA09_22840 43106083a538a91da07d8dfd9b778cf8 542 Pfam PF00672 HAMP domain 212 262 5.7E-9 T 01-11-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 CDA09_22840 43106083a538a91da07d8dfd9b778cf8 542 Gene3D G3DSA:1.10.287.950 212 542 8.2E-66 T 01-11-2018 CDA09_22840 43106083a538a91da07d8dfd9b778cf8 542 SMART SM00283 280 541 2.2E-46 T 01-11-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 CDA09_22840 43106083a538a91da07d8dfd9b778cf8 542 SMART SM00304 212 265 7.7E-10 T 01-11-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 CDA09_22840 43106083a538a91da07d8dfd9b778cf8 542 SMART SM01049 36 130 5.5E-34 T 01-11-2018 IPR033480 Single Cache domain 2 CDA09_22840 43106083a538a91da07d8dfd9b778cf8 542 SUPERFAMILY SSF58104 233 540 4.19E-59 T 01-11-2018 CDA09_15260 3ecb735ce48bab8279481e4465de3e06 199 Gene3D G3DSA:1.10.1740.10 1 122 2.2E-41 T 01-11-2018 CDA09_15260 3ecb735ce48bab8279481e4465de3e06 199 SUPERFAMILY SSF88659 125 187 1.63E-18 T 01-11-2018 IPR013324 RNA polymerase sigma factor, region 3/4-like CDA09_15260 3ecb735ce48bab8279481e4465de3e06 199 Pfam PF08281 Sigma-70, region 4 132 182 6.6E-19 T 01-11-2018 IPR013249 RNA polymerase sigma factor 70, region 4 type 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 CDA09_15260 3ecb735ce48bab8279481e4465de3e06 199 SUPERFAMILY SSF88946 2 110 2.35E-31 T 01-11-2018 IPR013325 RNA polymerase sigma factor, region 2 GO:0003700|GO:0006352|GO:0006355 CDA09_15260 3ecb735ce48bab8279481e4465de3e06 199 ProSitePatterns PS01063 Sigma-70 factors ECF subfamily signature. 47 78 - T 01-11-2018 IPR000838 RNA polymerase sigma factor 70, ECF, conserved site GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 CDA09_15260 3ecb735ce48bab8279481e4465de3e06 199 Gene3D G3DSA:1.10.10.10 123 192 3.6E-23 T 01-11-2018 IPR036388 Winged helix-like DNA-binding domain superfamily CDA09_15260 3ecb735ce48bab8279481e4465de3e06 199 Pfam PF04542 Sigma-70 region 2 25 92 3.0E-19 T 01-11-2018 IPR007627 RNA polymerase sigma-70 region 2 GO:0003700|GO:0006352|GO:0006355 CDA09_15260 3ecb735ce48bab8279481e4465de3e06 199 TIGRFAM TIGR02937 sigma70-ECF: RNA polymerase sigma factor, sigma-70 family 21 187 1.3E-31 T 01-11-2018 IPR014284 RNA polymerase sigma-70 like domain GO:0003700|GO:0006352|GO:0006355 CDA09_15260 3ecb735ce48bab8279481e4465de3e06 199 TIGRFAM TIGR02939 RpoE_Sigma70: RNA polymerase sigma factor RpoE 1 191 1.3E-106 T 01-11-2018 IPR014286 RNA polymerase sigma-70 RpoE type GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 CDA09_05455 6236a1b08369e5718102432aeb1ecec6 481 Pfam PF01523 Putative modulator of DNA gyrase 40 332 1.5E-69 T 01-11-2018 IPR002510 Metalloprotease TldD/PmbA GO:0006508|GO:0008237 CDA09_05455 6236a1b08369e5718102432aeb1ecec6 481 Gene3D G3DSA:3.30.2290.10 17 240 5.5E-19 T 01-11-2018 IPR035068 Metalloprotease TldD/PmbA, N-terminal CDA09_05455 6236a1b08369e5718102432aeb1ecec6 481 SUPERFAMILY SSF111283 25 480 1.16E-135 T 01-11-2018 IPR036059 Metalloprotease TldD/PmbA superfamily GO:0006508|GO:0008237 CDA09_05455 6236a1b08369e5718102432aeb1ecec6 481 PIRSF PIRSF004919 21 481 5.3E-140 T 01-11-2018 IPR025502 TldD CDA09_02870 5c3b18758c0133602ef1c345f6f7c630 426 PIRSF PIRSF000124 2 426 1.5E-52 T 01-11-2018 IPR017476 UDP-glucose/GDP-mannose dehydrogenase GO:0016616|GO:0055114 Reactome: R-HSA-173599 CDA09_02870 5c3b18758c0133602ef1c345f6f7c630 426 Gene3D G3DSA:3.40.50.720 196 426 3.2E-55 T 01-11-2018 CDA09_02870 5c3b18758c0133602ef1c345f6f7c630 426 SUPERFAMILY SSF51735 3 188 1.6E-41 T 01-11-2018 IPR036291 NAD(P)-binding domain superfamily CDA09_02870 5c3b18758c0133602ef1c345f6f7c630 426 Pfam PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain 314 413 9.9E-19 T 01-11-2018 IPR014027 UDP-glucose/GDP-mannose dehydrogenase, C-terminal GO:0016616|GO:0051287|GO:0055114 Reactome: R-HSA-173599 CDA09_02870 5c3b18758c0133602ef1c345f6f7c630 426 TIGRFAM TIGR03026 NDP-sugDHase: nucleotide sugar dehydrogenase 3 406 2.1E-111 T 01-11-2018 IPR017476 UDP-glucose/GDP-mannose dehydrogenase GO:0016616|GO:0055114 Reactome: R-HSA-173599 CDA09_02870 5c3b18758c0133602ef1c345f6f7c630 426 SUPERFAMILY SSF52413 298 424 4.71E-25 T 01-11-2018 IPR036220 UDP-glucose/GDP-mannose dehydrogenase, C-terminal domain superfamily Reactome: R-HSA-173599 CDA09_02870 5c3b18758c0133602ef1c345f6f7c630 426 SUPERFAMILY SSF48179 197 288 2.04E-24 T 01-11-2018 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily GO:0055114 CDA09_02870 5c3b18758c0133602ef1c345f6f7c630 426 Pfam PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain 3 176 6.2E-30 T 01-11-2018 IPR001732 UDP-glucose/GDP-mannose dehydrogenase, N-terminal GO:0016616|GO:0051287|GO:0055114 Reactome: R-HSA-173599 CDA09_02870 5c3b18758c0133602ef1c345f6f7c630 426 Pfam PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain 198 286 2.3E-23 T 01-11-2018 IPR014026 UDP-glucose/GDP-mannose dehydrogenase, dimerisation GO:0016616|GO:0051287|GO:0055114 Reactome: R-HSA-173599 CDA09_02870 5c3b18758c0133602ef1c345f6f7c630 426 PIRSF PIRSF500136 1 426 3.7E-140 T 01-11-2018 IPR028359 UDP-N-acetyl-D-mannosamine/glucosamine dehydrogenase GO:0000271|GO:0016628|GO:0055114 CDA09_02870 5c3b18758c0133602ef1c345f6f7c630 426 SMART SM00984 313 413 1.6E-26 T 01-11-2018 IPR014027 UDP-glucose/GDP-mannose dehydrogenase, C-terminal GO:0016616|GO:0051287|GO:0055114 Reactome: R-HSA-173599 CDA09_02870 5c3b18758c0133602ef1c345f6f7c630 426 Gene3D G3DSA:3.40.50.720 1 194 1.9E-56 T 01-11-2018 CDA09_17965 61a6fe462bb20330b535231071cab51c 343 Pfam PF02885 Glycosyl transferase family, helical bundle domain 7 66 1.2E-11 T 01-11-2018 IPR017459 Glycosyl transferase family 3, N-terminal domain Reactome: R-HSA-73614|Reactome: R-HSA-73621 CDA09_17965 61a6fe462bb20330b535231071cab51c 343 SUPERFAMILY SSF52418 79 341 1.31E-93 T 01-11-2018 IPR035902 Nucleoside phosphorylase/phosphoribosyltransferase catalytic domain superfamily Reactome: R-HSA-73614|Reactome: R-HSA-73621 CDA09_17965 61a6fe462bb20330b535231071cab51c 343 TIGRFAM TIGR01245 trpD: anthranilate phosphoribosyltransferase 9 337 7.7E-123 T 01-11-2018 IPR005940 Anthranilate phosphoribosyl transferase GO:0000162|GO:0004048 KEGG: 00400+2.4.2.18 CDA09_17965 61a6fe462bb20330b535231071cab51c 343 Hamap MF_00211 Anthranilate phosphoribosyltransferase [trpD]. 7 338 36.669 T 01-11-2018 IPR005940 Anthranilate phosphoribosyl transferase GO:0000162|GO:0004048 KEGG: 00400+2.4.2.18 CDA09_17965 61a6fe462bb20330b535231071cab51c 343 Gene3D G3DSA:1.20.970.10 1 72 8.7E-31 T 01-11-2018 CDA09_17965 61a6fe462bb20330b535231071cab51c 343 Gene3D G3DSA:3.40.1030.10 76 343 3.1E-104 T 01-11-2018 IPR035902 Nucleoside phosphorylase/phosphoribosyltransferase catalytic domain superfamily Reactome: R-HSA-73614|Reactome: R-HSA-73621 CDA09_17965 61a6fe462bb20330b535231071cab51c 343 SUPERFAMILY SSF47648 4 71 1.44E-16 T 01-11-2018 IPR036320 Glycosyl transferase family 3, N-terminal domain superfamily Reactome: R-HSA-73614|Reactome: R-HSA-73621 CDA09_17965 61a6fe462bb20330b535231071cab51c 343 Pfam PF00591 Glycosyl transferase family, a/b domain 78 328 5.5E-92 T 01-11-2018 IPR000312 Glycosyl transferase, family 3 GO:0016757 Reactome: R-HSA-73614|Reactome: R-HSA-73621 CDA09_11690 e23490819846df7ee09d49c179bcec76 292 SUPERFAMILY SSF47616 133 279 1.0E-33 T 01-11-2018 IPR036282 Glutathione S-transferase, C-terminal domain superfamily CDA09_11690 e23490819846df7ee09d49c179bcec76 292 Pfam PF02798 Glutathione S-transferase, N-terminal domain 45 127 7.1E-6 T 01-11-2018 IPR004045 Glutathione S-transferase, N-terminal GO:0005515 CDA09_11690 e23490819846df7ee09d49c179bcec76 292 Pfam PF13410 Glutathione S-transferase, C-terminal domain 181 242 2.5E-10 T 01-11-2018 CDA09_11690 e23490819846df7ee09d49c179bcec76 292 SUPERFAMILY SSF52833 38 130 4.68E-15 T 01-11-2018 IPR036249 Thioredoxin-like superfamily CDA09_11690 e23490819846df7ee09d49c179bcec76 292 Gene3D G3DSA:1.20.1050.10 133 249 2.0E-109 T 01-11-2018 CDA09_11690 e23490819846df7ee09d49c179bcec76 292 Gene3D G3DSA:3.40.30.10 19 255 2.0E-109 T 01-11-2018 CDA09_12940 417b24e899e7e86549cb0256d841362a 686 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 547 682 1.8E-11 T 01-11-2018 IPR003594 Histidine kinase/HSP90-like ATPase CDA09_12940 417b24e899e7e86549cb0256d841362a 686 Gene3D G3DSA:1.20.120.160 367 490 3.5E-12 T 01-11-2018 IPR036641 HPT domain superfamily GO:0000160 CDA09_12940 417b24e899e7e86549cb0256d841362a 686 Gene3D G3DSA:3.30.565.10 501 683 1.0E-32 T 01-11-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily CDA09_12940 417b24e899e7e86549cb0256d841362a 686 Pfam PF01627 Hpt domain 374 469 1.2E-6 T 01-11-2018 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160 CDA09_12940 417b24e899e7e86549cb0256d841362a 686 Gene3D G3DSA:3.30.450.20 202 354 1.4E-7 T 01-11-2018 CDA09_12940 417b24e899e7e86549cb0256d841362a 686 PRINTS PR00344 Bacterial sensor protein C-terminal signature 589 603 4.5E-5 T 01-11-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 CDA09_12940 417b24e899e7e86549cb0256d841362a 686 PRINTS PR00344 Bacterial sensor protein C-terminal signature 647 665 4.5E-5 T 01-11-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 CDA09_12940 417b24e899e7e86549cb0256d841362a 686 PRINTS PR00344 Bacterial sensor protein C-terminal signature 631 641 4.5E-5 T 01-11-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 CDA09_12940 417b24e899e7e86549cb0256d841362a 686 SUPERFAMILY SSF55874 507 682 1.96E-26 T 01-11-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily CDA09_12940 417b24e899e7e86549cb0256d841362a 686 SMART SM00387 543 686 7.2E-19 T 01-11-2018 IPR003594 Histidine kinase/HSP90-like ATPase CDA09_12940 417b24e899e7e86549cb0256d841362a 686 SUPERFAMILY SSF47226 369 466 2.75E-11 T 01-11-2018 IPR036641 HPT domain superfamily GO:0000160 CDA09_12940 417b24e899e7e86549cb0256d841362a 686 Pfam PF13675 Type IV pili methyl-accepting chemotaxis transducer N-term 34 132 7.7E-10 T 01-11-2018 IPR029095 NarX-like, N-terminal CDA09_20155 d179c9d899f67697b92df9f5e5999abb 431 SUPERFAMILY SSF100950 6 223 2.51E-45 T 01-11-2018 IPR037171 NagB/RpiA transferase-like CDA09_20155 d179c9d899f67697b92df9f5e5999abb 431 Gene3D G3DSA:3.40.1080.10 1 184 2.4E-58 T 01-11-2018 CDA09_20155 d179c9d899f67697b92df9f5e5999abb 431 Gene3D G3DSA:3.30.750.70 186 289 7.4E-42 T 01-11-2018 CDA09_20155 d179c9d899f67697b92df9f5e5999abb 431 Gene3D G3DSA:3.40.1080.20 290 430 7.8E-60 T 01-11-2018 IPR038460 Acetyl-CoA hydrolase/transferase, C-terminal domain superfamily CDA09_20155 d179c9d899f67697b92df9f5e5999abb 431 Pfam PF02550 Acetyl-CoA hydrolase/transferase N-terminal domain 5 180 5.8E-17 T 01-11-2018 IPR003702 Acetyl-CoA hydrolase/transferase GO:0003824|GO:0006084 CDA09_20155 d179c9d899f67697b92df9f5e5999abb 431 Pfam PF13336 Acetyl-CoA hydrolase/transferase C-terminal domain 272 425 5.7E-63 T 01-11-2018 IPR026888 Acetyl-CoA hydrolase/transferase C-terminal domain CDA09_20155 d179c9d899f67697b92df9f5e5999abb 431 SUPERFAMILY SSF100950 189 428 1.77E-67 T 01-11-2018 IPR037171 NagB/RpiA transferase-like CDA09_22290 92ce14eaed2ce22f4137de6f0739e67a 273 Pfam PF03459 TOBE domain 207 269 8.5E-13 T 01-11-2018 IPR005116 Transport-associated OB, type 1 CDA09_22290 92ce14eaed2ce22f4137de6f0739e67a 273 Pfam PF03459 TOBE domain 135 197 1.3E-16 T 01-11-2018 IPR005116 Transport-associated OB, type 1 CDA09_22290 92ce14eaed2ce22f4137de6f0739e67a 273 Gene3D G3DSA:2.40.50.100 133 199 1.0E-23 T 01-11-2018 CDA09_22290 92ce14eaed2ce22f4137de6f0739e67a 273 TIGRFAM TIGR00638 Mop: molybdenum-pterin binding domain 204 270 1.1E-15 T 01-11-2018 IPR004606 Molybdenum-pterin binding GO:0015689 CDA09_22290 92ce14eaed2ce22f4137de6f0739e67a 273 TIGRFAM TIGR00638 Mop: molybdenum-pterin binding domain 133 201 3.4E-21 T 01-11-2018 IPR004606 Molybdenum-pterin binding GO:0015689 CDA09_22290 92ce14eaed2ce22f4137de6f0739e67a 273 Gene3D G3DSA:2.40.50.100 201 271 1.2E-23 T 01-11-2018 CDA09_22290 92ce14eaed2ce22f4137de6f0739e67a 273 PIRSF PIRSF005763 7 273 1.7E-93 T 01-11-2018 IPR016462 Molybdate-dependent transcriptional regulator ModE GO:0006355|GO:0015689|GO:0030151 CDA09_22290 92ce14eaed2ce22f4137de6f0739e67a 273 Gene3D G3DSA:1.10.10.10 8 118 5.1E-30 T 01-11-2018 IPR036388 Winged helix-like DNA-binding domain superfamily CDA09_22290 92ce14eaed2ce22f4137de6f0739e67a 273 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 27 89 9.0E-14 T 01-11-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 CDA09_22290 92ce14eaed2ce22f4137de6f0739e67a 273 SUPERFAMILY SSF50331 204 271 1.8E-18 T 01-11-2018 IPR008995 Molybdate/tungstate binding, C-terminal CDA09_22290 92ce14eaed2ce22f4137de6f0739e67a 273 SUPERFAMILY SSF46785 13 109 3.74E-23 T 01-11-2018 IPR036390 Winged helix DNA-binding domain superfamily CDA09_22290 92ce14eaed2ce22f4137de6f0739e67a 273 SUPERFAMILY SSF50331 133 201 5.59E-20 T 01-11-2018 IPR008995 Molybdate/tungstate binding, C-terminal CDA09_18505 3c65e40a8f25496c5c499381abdc244b 362 SUPERFAMILY SSF111369 46 272 3.01E-19 T 01-11-2018 CDA09_18505 3c65e40a8f25496c5c499381abdc244b 362 Gene3D G3DSA:2.40.30.170 42 276 6.9E-62 T 01-11-2018 CDA09_18505 3c65e40a8f25496c5c499381abdc244b 362 Pfam PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion 53 266 1.6E-17 T 01-11-2018 IPR032317 RND efflux pump, membrane fusion protein, barrel-sandwich domain CDA09_18505 3c65e40a8f25496c5c499381abdc244b 362 TIGRFAM TIGR01730 RND_mfp: efflux transporter, RND family, MFP subunit 44 349 1.4E-63 T 01-11-2018 IPR006143 RND efflux pump, membrane fusion protein GO:0005215|GO:0016020|GO:0055085 CDA09_18505 3c65e40a8f25496c5c499381abdc244b 362 Gene3D G3DSA:2.40.50.100 54 200 6.9E-62 T 01-11-2018 CDA09_18505 3c65e40a8f25496c5c499381abdc244b 362 Gene3D G3DSA:2.40.420.20 277 347 6.9E-62 T 01-11-2018 CDA09_18505 3c65e40a8f25496c5c499381abdc244b 362 Gene3D G3DSA:1.10.287.470 88 153 6.9E-62 T 01-11-2018 CDA09_11860 c4d513a4a9142aabe324eb704b7ffe71 363 TIGRFAM TIGR03181 PDH_E1_alph_x: pyruvate dehydrogenase (acetyl-transferring) E1 component, alpha subunit 11 348 1.1E-142 T 01-11-2018 IPR017596 Pyruvate dehydrogenase E1 component subunit alpha/BCKADH E1-alpha KEGG: 00010+1.2.4.1|KEGG: 00020+1.2.4.1|KEGG: 00620+1.2.4.1 CDA09_11860 c4d513a4a9142aabe324eb704b7ffe71 363 SUPERFAMILY SSF52518 5 349 6.25E-100 T 01-11-2018 IPR029061 Thiamin diphosphate-binding fold CDA09_11860 c4d513a4a9142aabe324eb704b7ffe71 363 Pfam PF00676 Dehydrogenase E1 component 39 318 1.4E-78 T 01-11-2018 IPR001017 Dehydrogenase, E1 component GO:0016624 Reactome: R-HSA-389661 CDA09_11860 c4d513a4a9142aabe324eb704b7ffe71 363 Gene3D G3DSA:3.40.50.970 2 353 2.5E-112 T 01-11-2018 CDA09_19540 7ab7245a7a8f04ddd1e7fa2673adb647 699 SUPERFAMILY SSF54211 484 604 6.32E-47 T 01-11-2018 IPR020568 Ribosomal protein S5 domain 2-type fold CDA09_19540 7ab7245a7a8f04ddd1e7fa2673adb647 699 Gene3D G3DSA:2.40.30.10 294 421 1.8E-49 T 01-11-2018 CDA09_19540 7ab7245a7a8f04ddd1e7fa2673adb647 699 Gene3D G3DSA:3.30.70.240 609 680 2.1E-92 T 01-11-2018 CDA09_19540 7ab7245a7a8f04ddd1e7fa2673adb647 699 Pfam PF00009 Elongation factor Tu GTP binding domain 9 288 8.4E-64 T 01-11-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 CDA09_19540 7ab7245a7a8f04ddd1e7fa2673adb647 699 ProSitePatterns PS00301 Translational (tr)-type guanine nucleotide-binding (G) domain signature. 51 66 - T 01-11-2018 IPR031157 Tr-type G domain, conserved site CDA09_19540 7ab7245a7a8f04ddd1e7fa2673adb647 699 TIGRFAM TIGR00484 EF-G: translation elongation factor G 2 698 0.0 T 01-11-2018 IPR004540 Translation elongation factor EFG/EF2 GO:0003746|GO:0005525|GO:0005622|GO:0006414 Reactome: R-HSA-5389840 CDA09_19540 7ab7245a7a8f04ddd1e7fa2673adb647 699 SUPERFAMILY SSF54980 409 486 1.98E-25 T 01-11-2018 IPR035647 EF-G domain III/V-like CDA09_19540 7ab7245a7a8f04ddd1e7fa2673adb647 699 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 9 185 2.1E-31 T 01-11-2018 IPR005225 Small GTP-binding protein domain GO:0005525 CDA09_19540 7ab7245a7a8f04ddd1e7fa2673adb647 699 Pfam PF03144 Elongation factor Tu domain 2 329 396 8.2E-17 T 01-11-2018 IPR004161 Translation elongation factor EFTu-like, domain 2 GO:0005525 CDA09_19540 7ab7245a7a8f04ddd1e7fa2673adb647 699 PRINTS PR00315 GTP-binding elongation factor signature 58 66 4.3E-15 T 01-11-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 CDA09_19540 7ab7245a7a8f04ddd1e7fa2673adb647 699 PRINTS PR00315 GTP-binding elongation factor signature 101 112 4.3E-15 T 01-11-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 CDA09_19540 7ab7245a7a8f04ddd1e7fa2673adb647 699 PRINTS PR00315 GTP-binding elongation factor signature 137 146 4.3E-15 T 01-11-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 CDA09_19540 7ab7245a7a8f04ddd1e7fa2673adb647 699 PRINTS PR00315 GTP-binding elongation factor signature 85 95 4.3E-15 T 01-11-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 CDA09_19540 7ab7245a7a8f04ddd1e7fa2673adb647 699 PRINTS PR00315 GTP-binding elongation factor signature 12 25 4.3E-15 T 01-11-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 CDA09_19540 7ab7245a7a8f04ddd1e7fa2673adb647 699 SMART SM00889 485 603 2.1E-76 T 01-11-2018 IPR005517 Translation elongation factor EFG/EF2, domain IV GO:0005525 CDA09_19540 7ab7245a7a8f04ddd1e7fa2673adb647 699 Pfam PF03764 Elongation factor G, domain IV 484 603 5.9E-49 T 01-11-2018 IPR005517 Translation elongation factor EFG/EF2, domain IV GO:0005525 CDA09_19540 7ab7245a7a8f04ddd1e7fa2673adb647 699 SUPERFAMILY SSF50447 255 407 1.64E-33 T 01-11-2018 IPR009000 Translation protein, beta-barrel domain superfamily CDA09_19540 7ab7245a7a8f04ddd1e7fa2673adb647 699 SMART SM00838 605 693 8.7E-56 T 01-11-2018 IPR000640 Elongation factor EFG, domain V-like CDA09_19540 7ab7245a7a8f04ddd1e7fa2673adb647 699 Gene3D G3DSA:3.30.230.10 489 693 2.1E-92 T 01-11-2018 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup CDA09_19540 7ab7245a7a8f04ddd1e7fa2673adb647 699 Hamap MF_00054_B Elongation factor G [fusA]. 6 697 111.669 T 01-11-2018 IPR004540 Translation elongation factor EFG/EF2 GO:0003746|GO:0005525|GO:0005622|GO:0006414 Reactome: R-HSA-5389840 CDA09_19540 7ab7245a7a8f04ddd1e7fa2673adb647 699 SUPERFAMILY SSF54980 608 695 2.3E-30 T 01-11-2018 IPR035647 EF-G domain III/V-like CDA09_19540 7ab7245a7a8f04ddd1e7fa2673adb647 699 Gene3D G3DSA:3.40.50.300 1 293 4.0E-110 T 01-11-2018 CDA09_19540 7ab7245a7a8f04ddd1e7fa2673adb647 699 Pfam PF00679 Elongation factor G C-terminus 605 691 4.5E-32 T 01-11-2018 IPR000640 Elongation factor EFG, domain V-like CDA09_19540 7ab7245a7a8f04ddd1e7fa2673adb647 699 Gene3D G3DSA:3.30.70.870 438 488 2.8E-26 T 01-11-2018 CDA09_19540 7ab7245a7a8f04ddd1e7fa2673adb647 699 SUPERFAMILY SSF52540 6 288 1.6E-104 T 01-11-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CDA09_19540 7ab7245a7a8f04ddd1e7fa2673adb647 699 Pfam PF14492 Elongation Factor G, domain II 409 482 3.1E-34 T 01-11-2018 CDA09_10645 36d6fba14ac774c77b9fc4b5768f63fd 191 Gene3D G3DSA:1.20.1290.10 19 186 1.1E-43 T 01-11-2018 IPR029032 AhpD-like Reactome: R-HSA-5628897 CDA09_10645 36d6fba14ac774c77b9fc4b5768f63fd 191 TIGRFAM TIGR00778 ahpD_dom: alkylhydroperoxidase AhpD family core domain 65 107 2.3E-8 T 01-11-2018 IPR004675 Alkylhydroperoxidase AhpD core GO:0051920|GO:0055114 KEGG: 00480+1.11.1.15 CDA09_10645 36d6fba14ac774c77b9fc4b5768f63fd 191 SUPERFAMILY SSF69118 8 188 2.1E-47 T 01-11-2018 IPR029032 AhpD-like Reactome: R-HSA-5628897 CDA09_10645 36d6fba14ac774c77b9fc4b5768f63fd 191 Pfam PF02627 Carboxymuconolactone decarboxylase family 54 121 2.1E-7 T 01-11-2018 IPR003779 Carboxymuconolactone decarboxylase-like GO:0051920|GO:0055114 KEGG: 00480+1.11.1.15 CDA09_18250 ac18cefb8617135ee39b4a69bcbce3ff 286 Hamap MF_01877 Ribosomal RNA small subunit methyltransferase I [rsmI]. 13 234 35.312 T 01-11-2018 IPR008189 rRNA small subunit methyltransferase I GO:0008168 CDA09_18250 ac18cefb8617135ee39b4a69bcbce3ff 286 TIGRFAM TIGR00096 TIGR00096: 16S rRNA (cytidine(1402)-2'-O)-methyltransferase 14 282 2.4E-79 T 01-11-2018 IPR008189 rRNA small subunit methyltransferase I GO:0008168 CDA09_18250 ac18cefb8617135ee39b4a69bcbce3ff 286 ProSitePatterns PS01296 RsmI AdoMet-dependent methyltransferase protein family signature. 91 102 - T 01-11-2018 IPR018063 SAM-dependent methyltransferase RsmI, conserved site GO:0008168 CDA09_18250 ac18cefb8617135ee39b4a69bcbce3ff 286 Gene3D G3DSA:3.30.950.10 121 240 2.0E-39 T 01-11-2018 IPR014776 Tetrapyrrole methylase, subdomain 2 GO:0008168 Reactome: R-HSA-5358493 CDA09_18250 ac18cefb8617135ee39b4a69bcbce3ff 286 Pfam PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases 14 213 1.8E-25 T 01-11-2018 IPR000878 Tetrapyrrole methylase GO:0008168 Reactome: R-HSA-5358493 CDA09_18250 ac18cefb8617135ee39b4a69bcbce3ff 286 SUPERFAMILY SSF53790 12 232 2.88E-75 T 01-11-2018 IPR035996 Tetrapyrrole methylase superfamily GO:0008168 Reactome: R-HSA-5358493 CDA09_18250 ac18cefb8617135ee39b4a69bcbce3ff 286 PIRSF PIRSF005917 2 286 5.7E-96 T 01-11-2018 IPR008189 rRNA small subunit methyltransferase I GO:0008168 CDA09_18250 ac18cefb8617135ee39b4a69bcbce3ff 286 Gene3D G3DSA:3.40.1010.10 3 120 4.3E-40 T 01-11-2018 IPR014777 Tetrapyrrole methylase, subdomain 1 GO:0008168 Reactome: R-HSA-5358493 CDA09_05960 f754503e56267e613857cea5ee1f94b8 258 TIGRFAM TIGR00466 kdsB: 3-deoxy-D-manno-octulosonate cytidylyltransferase 4 245 6.8E-89 T 01-11-2018 IPR004528 3-deoxy-D-manno-octulosonate cytidylyltransferase GO:0005737|GO:0008690 KEGG: 00540+2.7.7.38|MetaCyc: PWY-1269 CDA09_05960 f754503e56267e613857cea5ee1f94b8 258 Pfam PF02348 Cytidylyltransferase 6 225 5.8E-56 T 01-11-2018 IPR003329 Acylneuraminate cytidylyltransferase KEGG: 00540+2.7.7.38|MetaCyc: PWY-1269|Reactome: R-HSA-4085001 CDA09_05960 f754503e56267e613857cea5ee1f94b8 258 Gene3D G3DSA:3.90.550.10 2 252 1.5E-96 T 01-11-2018 IPR029044 Nucleotide-diphospho-sugar transferases CDA09_05960 f754503e56267e613857cea5ee1f94b8 258 Hamap MF_00057 8-amino-3,8-dideoxy-manno-octulosonate cytidylyltransferase [kdsB]. 2 252 43.836 T 01-11-2018 IPR004528 3-deoxy-D-manno-octulosonate cytidylyltransferase GO:0005737|GO:0008690 KEGG: 00540+2.7.7.38|MetaCyc: PWY-1269 CDA09_05960 f754503e56267e613857cea5ee1f94b8 258 SUPERFAMILY SSF53448 4 250 2.35E-61 T 01-11-2018 IPR029044 Nucleotide-diphospho-sugar transferases CDA09_14915 91f0a610c2695283135115f1c83ee81f 273 Gene3D G3DSA:1.10.166.10 1 70 1.5E-29 T 01-11-2018 IPR037133 Tetrahydrodipicolinate-N-succinyltransferase, N-terminal domain superfamily KEGG: 00300+2.3.1.117 CDA09_14915 91f0a610c2695283135115f1c83ee81f 273 Pfam PF14602 Hexapeptide repeat of succinyl-transferase 175 209 2.3E-12 T 01-11-2018 IPR001451 Hexapeptide repeat CDA09_14915 91f0a610c2695283135115f1c83ee81f 273 Pfam PF14805 Tetrahydrodipicolinate N-succinyltransferase N-terminal 3 69 1.5E-24 T 01-11-2018 IPR023180 Tetrahydrodipicolinate-N-succinyltransferase, chain A, domain 1 KEGG: 00300+2.3.1.117 CDA09_14915 91f0a610c2695283135115f1c83ee81f 273 TIGRFAM TIGR00965 dapD: 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-succinyltransferase 4 272 1.4E-142 T 01-11-2018 IPR005664 Tetrahydrodipicolinate N-succinyltransferase, transferase hexapeptide repeat family GO:0008666|GO:0009089 KEGG: 00300+2.3.1.117 CDA09_14915 91f0a610c2695283135115f1c83ee81f 273 Gene3D G3DSA:2.160.10.10 87 257 2.5E-56 T 01-11-2018 CDA09_14915 91f0a610c2695283135115f1c83ee81f 273 Hamap MF_00811 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-succinyltransferase [dapD]. 1 272 56.178 T 01-11-2018 IPR005664 Tetrahydrodipicolinate N-succinyltransferase, transferase hexapeptide repeat family GO:0008666|GO:0009089 KEGG: 00300+2.3.1.117 CDA09_14915 91f0a610c2695283135115f1c83ee81f 273 ProSitePatterns PS00101 Hexapeptide-repeat containing-transferases signature. 134 162 - T 01-11-2018 IPR018357 Hexapeptide transferase, conserved site GO:0016740 Reactome: R-HSA-446205 CDA09_14915 91f0a610c2695283135115f1c83ee81f 273 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 115 166 7.3E-4 T 01-11-2018 IPR001451 Hexapeptide repeat CDA09_14915 91f0a610c2695283135115f1c83ee81f 273 SUPERFAMILY SSF51161 1 256 2.77E-75 T 01-11-2018 IPR011004 Trimeric LpxA-like superfamily CDA09_20865 d1e245fbef3525da6d806137272317b3 506 Gene3D G3DSA:3.40.50.1100 53 149 4.9E-144 T 01-11-2018 CDA09_20865 d1e245fbef3525da6d806137272317b3 506 TIGRFAM TIGR01124 ilvA_2Cterm: threonine ammonia-lyase, biosynthetic 7 505 1.4E-256 T 01-11-2018 IPR005787 Threonine dehydratase, biosynthetic GO:0004794|GO:0009097 KEGG: 00260+4.3.1.19|KEGG: 00290+4.3.1.19 CDA09_20865 d1e245fbef3525da6d806137272317b3 506 Pfam PF00291 Pyridoxal-phosphate dependent enzyme 20 309 5.3E-81 T 01-11-2018 IPR001926 Pyridoxal-phosphate dependent enzyme CDA09_20865 d1e245fbef3525da6d806137272317b3 506 Pfam PF00585 C-terminal regulatory domain of Threonine dehydratase 418 505 7.0E-23 T 01-11-2018 IPR001721 Threonine dehydratase, ACT-like domain KEGG: 00260+4.3.1.19|KEGG: 00290+4.3.1.19 CDA09_20865 d1e245fbef3525da6d806137272317b3 506 Pfam PF00585 C-terminal regulatory domain of Threonine dehydratase 322 411 1.4E-27 T 01-11-2018 IPR001721 Threonine dehydratase, ACT-like domain KEGG: 00260+4.3.1.19|KEGG: 00290+4.3.1.19 CDA09_20865 d1e245fbef3525da6d806137272317b3 506 SUPERFAMILY SSF53686 6 358 2.36E-104 T 01-11-2018 IPR036052 Tryptophan synthase beta subunit-like PLP-dependent enzyme CDA09_20865 d1e245fbef3525da6d806137272317b3 506 Gene3D G3DSA:3.40.1020.10 331 506 9.5E-77 T 01-11-2018 IPR038110 Threonine dehydratase, ACT-like domain superfamily KEGG: 00260+4.3.1.19|KEGG: 00290+4.3.1.19 CDA09_20865 d1e245fbef3525da6d806137272317b3 506 Gene3D G3DSA:3.40.50.1100 17 320 4.9E-144 T 01-11-2018 CDA09_20865 d1e245fbef3525da6d806137272317b3 506 ProSitePatterns PS00165 Serine/threonine dehydratases pyridoxal-phosphate attachment site. 45 58 - T 01-11-2018 IPR000634 Serine/threonine dehydratase, pyridoxal-phosphate-binding site GO:0006520|GO:0030170 CDA09_20865 d1e245fbef3525da6d806137272317b3 506 SUPERFAMILY SSF55021 412 505 5.49E-27 T 01-11-2018 CDA09_20865 d1e245fbef3525da6d806137272317b3 506 SUPERFAMILY SSF55021 329 415 1.01E-27 T 01-11-2018 CDA09_04200 40efa589cd887937827751836e7ad073 188 TIGRFAM TIGR01841 phasin: phasin family protein 28 112 4.2E-21 T 01-11-2018 IPR010127 Phasin, subfamily 1 CDA09_04200 40efa589cd887937827751836e7ad073 188 Pfam PF09361 Phasin protein 8 107 2.5E-30 T 01-11-2018 IPR018968 Phasin CDA09_21070 970e142f86379a6fcb37ba7426d31ad0 98 TIGRFAM TIGR01873 cas_CT1978: CRISPR-associated endoribonuclease Cas2, subtype I-E/ECOLI 1 86 2.6E-34 T 01-11-2018 IPR010152 CRISPR-associated protein Cas2 subtype CDA09_21070 970e142f86379a6fcb37ba7426d31ad0 98 Gene3D G3DSA:3.30.70.240 1 75 2.7E-32 T 01-11-2018 CDA09_21070 970e142f86379a6fcb37ba7426d31ad0 98 Pfam PF09707 CRISPR-associated protein (Cas_Cas2CT1978) 1 86 9.6E-37 T 01-11-2018 IPR010152 CRISPR-associated protein Cas2 subtype CDA09_01380 8e748e47cd3f02dc0644fbd6cd5bbb24 68 TIGRFAM TIGR03141 cytochro_ccmD: heme exporter protein CcmD 10 49 2.2E-9 T 01-11-2018 IPR007078 Haem exporter protein D (CcmD) GO:0015886|GO:0016021|GO:0017004 CDA09_22740 b14cc04edcf1417b8e34a0a4946648b0 473 SUPERFAMILY SSF47240 105 323 5.35E-48 T 01-11-2018 IPR009078 Ferritin-like superfamily CDA09_22740 b14cc04edcf1417b8e34a0a4946648b0 473 TIGRFAM TIGR03225 benzo_boxB: benzoyl-CoA oxygenase, B subunit 2 472 1.4E-280 T 01-11-2018 IPR017635 Benzoyl-CoA oxygenase, B subunit KEGG: 00362+1.14.13.208|MetaCyc: PWY-1361 CDA09_22740 b14cc04edcf1417b8e34a0a4946648b0 473 Gene3D G3DSA:1.10.620.20 1 473 6.9E-250 T 01-11-2018 IPR012348 Ribonucleotide reductase-like GO:0016491|GO:0055114 Reactome: R-HSA-499943 CDA09_19265 d56d935da382485def11179c8938ba63 168 SUPERFAMILY SSF158442 13 159 3.01E-43 T 01-11-2018 IPR023380 DsbB-like superfamily CDA09_19265 d56d935da382485def11179c8938ba63 168 Pfam PF02600 Disulfide bond formation protein DsbB 10 159 2.0E-44 T 01-11-2018 IPR003752 Disulphide bond formation protein DsbB/BdbC GO:0015035|GO:0016020 CDA09_19265 d56d935da382485def11179c8938ba63 168 Hamap MF_00286 Disulfide bond formation protein B [dsbB]. 5 167 23.543 T 01-11-2018 IPR022920 Disulphide bond formation protein DsbB CDA09_19265 d56d935da382485def11179c8938ba63 168 Gene3D G3DSA:1.20.1550.10 2 167 2.6E-52 T 01-11-2018 IPR023380 DsbB-like superfamily CDA09_19750 ac61b3d262f4f274d3fcaaaadb2842f3 745 TIGRFAM TIGR03509 OMP_MtrB_PioB: decaheme-associated outer membrane protein, MtrB/PioB family 52 745 1.9E-106 T 01-11-2018 IPR020016 Decahaem-associated outer membrane protein, MtrB/PioB CDA09_19750 ac61b3d262f4f274d3fcaaaadb2842f3 745 Pfam PF11854 Putative outer membrane beta-barrel porin, MtrB/PioB 55 745 1.8E-136 T 01-11-2018 IPR020016 Decahaem-associated outer membrane protein, MtrB/PioB CDA09_19750 ac61b3d262f4f274d3fcaaaadb2842f3 745 SUPERFAMILY SSF56935 106 437 2.65E-8 T 01-11-2018 CDA09_19750 ac61b3d262f4f274d3fcaaaadb2842f3 745 Gene3D G3DSA:2.40.170.20 443 729 4.4E-10 T 01-11-2018 IPR036942 TonB-dependent receptor-like, beta-barrel domain superfamily CDA09_19750 ac61b3d262f4f274d3fcaaaadb2842f3 745 SUPERFAMILY SSF56935 450 726 5.19E-12 T 01-11-2018 CDA09_00120 13bf9275ea5d786c3164263ab419fa2b 439 Pfam PF00005 ABC transporter 26 165 1.2E-30 T 01-11-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 CDA09_00120 13bf9275ea5d786c3164263ab419fa2b 439 SMART SM00382 35 219 6.6E-15 T 01-11-2018 IPR003593 AAA+ ATPase domain CDA09_00120 13bf9275ea5d786c3164263ab419fa2b 439 Pfam PF09821 C-terminal AAA-associated domain 301 419 3.9E-33 T 01-11-2018 IPR018632 C-terminal AAA-associated domain CDA09_00120 13bf9275ea5d786c3164263ab419fa2b 439 Gene3D G3DSA:3.40.50.300 3 247 3.5E-60 T 01-11-2018 CDA09_00120 13bf9275ea5d786c3164263ab419fa2b 439 SUPERFAMILY SSF52540 5 243 2.9E-62 T 01-11-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CDA09_00120 13bf9275ea5d786c3164263ab419fa2b 439 ProSitePatterns PS00211 ABC transporters family signature. 138 152 - T 01-11-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 CDA09_05465 59dc3f94d19bd6d1db485643b9ede735 476 SUPERFAMILY SSF52540 153 397 8.17E-70 T 01-11-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CDA09_05465 59dc3f94d19bd6d1db485643b9ede735 476 SMART SM00382 174 317 2.3E-10 T 01-11-2018 IPR003593 AAA+ ATPase domain CDA09_05465 59dc3f94d19bd6d1db485643b9ede735 476 SUPERFAMILY SSF46689 404 455 5.82E-8 T 01-11-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 CDA09_05465 59dc3f94d19bd6d1db485643b9ede735 476 ProSitePatterns PS00676 Sigma-54 interaction domain ATP-binding region B signature. 240 255 - T 01-11-2018 IPR025943 Sigma-54 interaction domain, ATP-binding site 2 CDA09_05465 59dc3f94d19bd6d1db485643b9ede735 476 ProSitePatterns PS00675 Sigma-54 interaction domain ATP-binding region A signature. 178 191 - T 01-11-2018 IPR025662 Sigma-54 interaction domain, ATP-binding site 1 CDA09_05465 59dc3f94d19bd6d1db485643b9ede735 476 Gene3D G3DSA:3.40.50.300 145 324 6.1E-62 T 01-11-2018 CDA09_05465 59dc3f94d19bd6d1db485643b9ede735 476 Pfam PF00072 Response regulator receiver domain 21 129 1.7E-26 T 01-11-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 CDA09_05465 59dc3f94d19bd6d1db485643b9ede735 476 ProSitePatterns PS00688 Sigma-54 interaction domain C-terminal part signature. 367 376 - T 01-11-2018 IPR025944 Sigma-54 interaction domain, conserved site CDA09_05465 59dc3f94d19bd6d1db485643b9ede735 476 Gene3D G3DSA:1.10.10.60 403 457 4.4E-10 T 01-11-2018 CDA09_05465 59dc3f94d19bd6d1db485643b9ede735 476 Pfam PF00158 Sigma-54 interaction domain 154 320 6.8E-70 T 01-11-2018 IPR002078 RNA polymerase sigma factor 54 interaction domain GO:0005524|GO:0006355|GO:0008134 CDA09_05465 59dc3f94d19bd6d1db485643b9ede735 476 Gene3D G3DSA:1.10.8.60 325 402 2.5E-23 T 01-11-2018 CDA09_05465 59dc3f94d19bd6d1db485643b9ede735 476 SUPERFAMILY SSF52172 17 198 4.84E-41 T 01-11-2018 IPR011006 CheY-like superfamily CDA09_05465 59dc3f94d19bd6d1db485643b9ede735 476 SMART SM00448 18 129 1.5E-34 T 01-11-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 CDA09_05465 59dc3f94d19bd6d1db485643b9ede735 476 Gene3D G3DSA:3.40.50.2300 17 144 5.5E-36 T 01-11-2018 CDA09_10330 d6f4d20fb155ccd5ab6bfd97e8b8e826 307 SUPERFAMILY SSF51735 1 155 1.77E-27 T 01-11-2018 IPR036291 NAD(P)-binding domain superfamily CDA09_10330 d6f4d20fb155ccd5ab6bfd97e8b8e826 307 SUPERFAMILY SSF55347 131 269 3.33E-61 T 01-11-2018 CDA09_10330 d6f4d20fb155ccd5ab6bfd97e8b8e826 307 PIRSF PIRSF015689 1 298 3.8E-134 T 01-11-2018 IPR003361 Acetaldehyde dehydrogenase GO:0008774|GO:0019439|GO:0055114 KEGG: 00360+1.2.1.10|KEGG: 00362+1.2.1.10|KEGG: 00620+1.2.1.10|KEGG: 00621+1.2.1.10|KEGG: 00622+1.2.1.10|KEGG: 00650+1.2.1.10|MetaCyc: PWY-5162|MetaCyc: PWY-5436|MetaCyc: PWY-5480|MetaCyc: PWY-6587|MetaCyc: PWY-7085|MetaCyc: PWY-7180 CDA09_10330 d6f4d20fb155ccd5ab6bfd97e8b8e826 307 SMART SM00859 6 121 7.5E-6 T 01-11-2018 IPR000534 Semialdehyde dehydrogenase, NAD-binding GO:0016620|GO:0051287|GO:0055114 CDA09_10330 d6f4d20fb155ccd5ab6bfd97e8b8e826 307 Hamap MF_01657 Acetaldehyde dehydrogenase [mhpF]. 1 307 154.175 T 01-11-2018 IPR003361 Acetaldehyde dehydrogenase GO:0008774|GO:0019439|GO:0055114 KEGG: 00360+1.2.1.10|KEGG: 00362+1.2.1.10|KEGG: 00620+1.2.1.10|KEGG: 00621+1.2.1.10|KEGG: 00622+1.2.1.10|KEGG: 00650+1.2.1.10|MetaCyc: PWY-5162|MetaCyc: PWY-5436|MetaCyc: PWY-5480|MetaCyc: PWY-6587|MetaCyc: PWY-7085|MetaCyc: PWY-7180 CDA09_10330 d6f4d20fb155ccd5ab6bfd97e8b8e826 307 Gene3D G3DSA:3.30.360.10 131 274 4.5E-125 T 01-11-2018 CDA09_10330 d6f4d20fb155ccd5ab6bfd97e8b8e826 307 Gene3D G3DSA:3.40.50.720 8 286 4.5E-125 T 01-11-2018 CDA09_10330 d6f4d20fb155ccd5ab6bfd97e8b8e826 307 Pfam PF01118 Semialdehyde dehydrogenase, NAD binding domain 7 118 2.5E-10 T 01-11-2018 IPR000534 Semialdehyde dehydrogenase, NAD-binding GO:0016620|GO:0051287|GO:0055114 CDA09_10330 d6f4d20fb155ccd5ab6bfd97e8b8e826 307 Pfam PF09290 Prokaryotic acetaldehyde dehydrogenase, dimerisation 131 268 3.7E-66 T 01-11-2018 IPR015426 Acetaldehyde dehydrogenase, C-terminal GO:0008774|GO:0019439|GO:0055114 KEGG: 00360+1.2.1.10|KEGG: 00362+1.2.1.10|KEGG: 00620+1.2.1.10|KEGG: 00621+1.2.1.10|KEGG: 00622+1.2.1.10|KEGG: 00650+1.2.1.10|MetaCyc: PWY-5162|MetaCyc: PWY-5436|MetaCyc: PWY-5480|MetaCyc: PWY-6587|MetaCyc: PWY-7085|MetaCyc: PWY-7180 CDA09_10330 d6f4d20fb155ccd5ab6bfd97e8b8e826 307 TIGRFAM TIGR03215 ac_ald_DH_ac: acetaldehyde dehydrogenase (acetylating) 4 293 4.5E-145 T 01-11-2018 IPR003361 Acetaldehyde dehydrogenase GO:0008774|GO:0019439|GO:0055114 KEGG: 00360+1.2.1.10|KEGG: 00362+1.2.1.10|KEGG: 00620+1.2.1.10|KEGG: 00621+1.2.1.10|KEGG: 00622+1.2.1.10|KEGG: 00650+1.2.1.10|MetaCyc: PWY-5162|MetaCyc: PWY-5436|MetaCyc: PWY-5480|MetaCyc: PWY-6587|MetaCyc: PWY-7085|MetaCyc: PWY-7180 CDA09_19955 b26f70bfd75673c73283baad1a02cbc8 206 Pfam PF04191 Phospholipid methyltransferase 124 186 1.2E-6 T 01-11-2018 IPR007318 Phospholipid methyltransferase KEGG: 00564+2.1.1.17|MetaCyc: PWY-6825|Reactome: R-HSA-1483191 CDA09_19955 b26f70bfd75673c73283baad1a02cbc8 206 Gene3D G3DSA:1.20.120.1630 72 205 8.9E-17 T 01-11-2018 CDA09_15860 8c19b7ae21b9928ec23a7d50f214d88a 928 Pfam PF04679 ATP dependent DNA ligase C terminal region 455 544 3.7E-22 T 01-11-2018 IPR012309 DNA ligase, ATP-dependent, C-terminal GO:0003910|GO:0006281|GO:0006310 CDA09_15860 8c19b7ae21b9928ec23a7d50f214d88a 928 TIGRFAM TIGR02778 ligD_pol: DNA ligase D, polymerase domain 598 886 1.8E-65 T 01-11-2018 IPR014145 DNA ligase D, polymerase domain CDA09_15860 8c19b7ae21b9928ec23a7d50f214d88a 928 Pfam PF01068 ATP dependent DNA ligase domain 243 434 1.8E-27 T 01-11-2018 IPR012310 DNA ligase, ATP-dependent, central GO:0003910|GO:0005524|GO:0006281|GO:0006310 CDA09_15860 8c19b7ae21b9928ec23a7d50f214d88a 928 SUPERFAMILY SSF50249 437 552 9.42E-27 T 01-11-2018 IPR012340 Nucleic acid-binding, OB-fold CDA09_15860 8c19b7ae21b9928ec23a7d50f214d88a 928 TIGRFAM TIGR02779 NHEJ_ligase_lig: DNA ligase D, ligase domain 243 551 4.2E-83 T 01-11-2018 IPR014146 DNA ligase D, ligase domain CDA09_15860 8c19b7ae21b9928ec23a7d50f214d88a 928 SUPERFAMILY SSF56091 239 434 1.37E-40 T 01-11-2018 CDA09_15860 8c19b7ae21b9928ec23a7d50f214d88a 928 Pfam PF13298 DNA polymerase Ligase (LigD) 58 176 3.5E-37 T 01-11-2018 IPR014144 DNA ligase D, 3'-phosphoesterase domain CDA09_15860 8c19b7ae21b9928ec23a7d50f214d88a 928 Gene3D G3DSA:3.90.920.30 614 927 1.1E-88 T 01-11-2018 CDA09_15860 8c19b7ae21b9928ec23a7d50f214d88a 928 Gene3D G3DSA:3.30.1490.70 251 432 8.2E-46 T 01-11-2018 CDA09_15860 8c19b7ae21b9928ec23a7d50f214d88a 928 Gene3D G3DSA:3.30.470.30 266 390 8.2E-46 T 01-11-2018 CDA09_15860 8c19b7ae21b9928ec23a7d50f214d88a 928 Gene3D G3DSA:2.40.50.140 437 553 1.1E-34 T 01-11-2018 CDA09_15860 8c19b7ae21b9928ec23a7d50f214d88a 928 TIGRFAM TIGR02777 LigD_PE_dom: DNA ligase D, 3'-phosphoesterase domain 26 191 5.1E-61 T 01-11-2018 IPR014144 DNA ligase D, 3'-phosphoesterase domain CDA09_06215 5d45e8619559deef80b925008543f187 220 TIGRFAM TIGR01488 HAD-SF-IB: HAD phosphoserine phosphatase-like hydrolase, family IB 3 193 1.4E-20 T 01-11-2018 CDA09_06215 5d45e8619559deef80b925008543f187 220 Gene3D G3DSA:3.40.50.1000 4 217 6.3E-69 T 01-11-2018 IPR023214 HAD superfamily CDA09_06215 5d45e8619559deef80b925008543f187 220 Pfam PF12710 haloacid dehalogenase-like hydrolase 4 190 7.4E-33 T 01-11-2018 CDA09_06215 5d45e8619559deef80b925008543f187 220 TIGRFAM TIGR01490 HAD-SF-IB-hyp1: HAD hydrolase, family IB 3 204 7.2E-37 T 01-11-2018 IPR006385 HAD-superfamily hydrolase, subfamily IB, SerB1-like CDA09_06215 5d45e8619559deef80b925008543f187 220 SUPERFAMILY SSF56784 2 214 5.24E-29 T 01-11-2018 IPR036412 HAD-like superfamily CDA09_06215 5d45e8619559deef80b925008543f187 220 Gene3D G3DSA:1.20.1440.100 15 88 6.3E-69 T 01-11-2018 CDA09_19820 5a36446299a96ef0893d273912d2a0e3 462 SUPERFAMILY SSF56935 111 450 1.19E-15 T 01-11-2018 CDA09_19820 5a36446299a96ef0893d273912d2a0e3 462 Pfam PF07396 Phosphate-selective porin O and P 166 382 2.4E-5 T 01-11-2018 IPR010870 Phosphate-selective porin O/P CDA09_12295 6209eb4aa18f76a08640993aa1408c22 400 SMART SM00052 135 380 1.6E-87 T 01-11-2018 IPR001633 EAL domain CDA09_12295 6209eb4aa18f76a08640993aa1408c22 400 SMART SM00448 1 120 5.9E-21 T 01-11-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 CDA09_12295 6209eb4aa18f76a08640993aa1408c22 400 SUPERFAMILY SSF141868 141 389 2.09E-80 T 01-11-2018 IPR035919 EAL domain superfamily CDA09_12295 6209eb4aa18f76a08640993aa1408c22 400 Pfam PF00563 EAL domain 141 374 1.8E-68 T 01-11-2018 IPR001633 EAL domain CDA09_12295 6209eb4aa18f76a08640993aa1408c22 400 Gene3D G3DSA:3.20.20.450 139 396 2.0E-87 T 01-11-2018 IPR035919 EAL domain superfamily CDA09_12295 6209eb4aa18f76a08640993aa1408c22 400 SUPERFAMILY SSF52172 1 123 1.04E-25 T 01-11-2018 IPR011006 CheY-like superfamily CDA09_12295 6209eb4aa18f76a08640993aa1408c22 400 Gene3D G3DSA:3.40.50.2300 1 127 3.8E-28 T 01-11-2018 CDA09_12295 6209eb4aa18f76a08640993aa1408c22 400 Pfam PF00072 Response regulator receiver domain 3 120 1.0E-20 T 01-11-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 CDA09_09385 eccbd0038c55cab83016ab4fb171bff7 258 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 174 191 1.2E-37 T 01-11-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CDA09_09385 eccbd0038c55cab83016ab4fb171bff7 258 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 11 28 1.2E-37 T 01-11-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CDA09_09385 eccbd0038c55cab83016ab4fb171bff7 258 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 209 229 1.2E-37 T 01-11-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CDA09_09385 eccbd0038c55cab83016ab4fb171bff7 258 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 80 91 1.2E-37 T 01-11-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CDA09_09385 eccbd0038c55cab83016ab4fb171bff7 258 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 128 144 1.2E-37 T 01-11-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CDA09_09385 eccbd0038c55cab83016ab4fb171bff7 258 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 154 173 1.2E-37 T 01-11-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CDA09_09385 eccbd0038c55cab83016ab4fb171bff7 258 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 141 169 - T 01-11-2018 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 CDA09_09385 eccbd0038c55cab83016ab4fb171bff7 258 SUPERFAMILY SSF51735 8 244 9.55E-69 T 01-11-2018 IPR036291 NAD(P)-binding domain superfamily CDA09_09385 eccbd0038c55cab83016ab4fb171bff7 258 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 154 173 1.6E-10 T 01-11-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CDA09_09385 eccbd0038c55cab83016ab4fb171bff7 258 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 80 91 1.6E-10 T 01-11-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CDA09_09385 eccbd0038c55cab83016ab4fb171bff7 258 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 134 142 1.6E-10 T 01-11-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CDA09_09385 eccbd0038c55cab83016ab4fb171bff7 258 SMART SM00822 This enzymatic domain is part of bacterial polyketide synthases and catalyses the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain. It uses NADPH to reduce the keto group to a hydroxy group. 10 189 4.5E-4 T 01-11-2018 CDA09_09385 eccbd0038c55cab83016ab4fb171bff7 258 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 16 244 6.2E-52 T 01-11-2018 CDA09_09385 eccbd0038c55cab83016ab4fb171bff7 258 Gene3D G3DSA:3.40.50.720 3 248 9.3E-71 T 01-11-2018 CDA09_18675 0b2b8ba50f94eda27d9c3d08c02ec3e4 230 SUPERFAMILY SSF53955 54 219 3.94E-59 T 01-11-2018 IPR023346 Lysozyme-like domain superfamily CDA09_18675 0b2b8ba50f94eda27d9c3d08c02ec3e4 230 Pfam PF00912 Transglycosylase 58 212 1.5E-55 T 01-11-2018 IPR001264 Glycosyl transferase, family 51 KEGG: 00550+2.4.1.129|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471 CDA09_18675 0b2b8ba50f94eda27d9c3d08c02ec3e4 230 Hamap MF_00766 Biosynthetic peptidoglycan transglycosylase [mtgA]. 10 230 39.033 T 01-11-2018 IPR011812 Biosynthetic peptidoglycan transglycosylase GO:0009252|GO:0009274|GO:0016021|GO:0016763 KEGG: 00550+2.4.1.129|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471 CDA09_18675 0b2b8ba50f94eda27d9c3d08c02ec3e4 230 TIGRFAM TIGR02070 mono_pep_trsgly: monofunctional biosynthetic peptidoglycan transglycosylase 10 229 6.1E-91 T 01-11-2018 IPR011812 Biosynthetic peptidoglycan transglycosylase GO:0009252|GO:0009274|GO:0016021|GO:0016763 KEGG: 00550+2.4.1.129|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471 CDA09_18675 0b2b8ba50f94eda27d9c3d08c02ec3e4 230 Gene3D G3DSA:1.10.3810.10 47 228 1.2E-56 T 01-11-2018 IPR036950 Penicillin binding protein transglycosylase domain KEGG: 00550+2.4.1.129|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471 CDA09_10870 4f6d2e62dda4e87f25af61dbf30a77a1 346 Hamap MF_00230 Nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase [cobT]. 9 344 35.763 T 01-11-2018 IPR017846 Nicotinate-nucleotide-dimethylbenzimidazole phosphoribosyltransferase, prokaryotic GO:0008939|GO:0009163 KEGG: 00860+2.4.2.21|MetaCyc: PWY-5509|MetaCyc: PWY-6269|MetaCyc: PWY-7964|MetaCyc: PWY-7965|MetaCyc: PWY-7966|MetaCyc: PWY-7967|MetaCyc: PWY-7968|MetaCyc: PWY-7969|MetaCyc: PWY-7970 CDA09_10870 4f6d2e62dda4e87f25af61dbf30a77a1 346 TIGRFAM TIGR03160 cobT_DBIPRT: nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase 11 342 1.5E-136 T 01-11-2018 IPR017846 Nicotinate-nucleotide-dimethylbenzimidazole phosphoribosyltransferase, prokaryotic GO:0008939|GO:0009163 KEGG: 00860+2.4.2.21|MetaCyc: PWY-5509|MetaCyc: PWY-6269|MetaCyc: PWY-7964|MetaCyc: PWY-7965|MetaCyc: PWY-7966|MetaCyc: PWY-7967|MetaCyc: PWY-7968|MetaCyc: PWY-7969|MetaCyc: PWY-7970 CDA09_10870 4f6d2e62dda4e87f25af61dbf30a77a1 346 Pfam PF02277 Phosphoribosyltransferase 7 342 4.6E-133 T 01-11-2018 IPR003200 Nicotinate-nucleotide-dimethylbenzimidazole phosphoribosyltransferase-like GO:0008939|GO:0009236 KEGG: 00860+2.4.2.21|MetaCyc: PWY-5509|MetaCyc: PWY-6269|MetaCyc: PWY-7964|MetaCyc: PWY-7965|MetaCyc: PWY-7966|MetaCyc: PWY-7967|MetaCyc: PWY-7968|MetaCyc: PWY-7969|MetaCyc: PWY-7970 CDA09_10870 4f6d2e62dda4e87f25af61dbf30a77a1 346 Gene3D G3DSA:1.10.1610.10 21 342 2.9E-130 T 01-11-2018 IPR023195 Nicotinate-nucleotide-dimethylbenzimidazole phosphoribosyltransferase, N-terminal GO:0008939|GO:0009236 KEGG: 00860+2.4.2.21|MetaCyc: PWY-5509|MetaCyc: PWY-6269|MetaCyc: PWY-7964|MetaCyc: PWY-7965|MetaCyc: PWY-7966|MetaCyc: PWY-7967|MetaCyc: PWY-7968|MetaCyc: PWY-7969|MetaCyc: PWY-7970 CDA09_10870 4f6d2e62dda4e87f25af61dbf30a77a1 346 SUPERFAMILY SSF52733 5 344 1.05E-118 T 01-11-2018 IPR036087 Nicotinate-nucleotide-dimethylbenzimidazole phosphoribosyltransferase-like superfamily GO:0008939|GO:0009236 KEGG: 00860+2.4.2.21|MetaCyc: PWY-5509|MetaCyc: PWY-6269|MetaCyc: PWY-7964|MetaCyc: PWY-7965|MetaCyc: PWY-7966|MetaCyc: PWY-7967|MetaCyc: PWY-7968|MetaCyc: PWY-7969|MetaCyc: PWY-7970 CDA09_10870 4f6d2e62dda4e87f25af61dbf30a77a1 346 Gene3D G3DSA:3.40.50.10210 53 325 2.9E-130 T 01-11-2018 CDA09_19380 996c2b1ed7c312bf08f3809b9d7f1015 944 TIGRFAM TIGR00630 uvra: excinuclease ABC subunit A 4 922 0.0 T 01-11-2018 IPR004602 UvrABC system subunit A GO:0003677|GO:0006289|GO:0009380|GO:0016887 CDA09_19380 996c2b1ed7c312bf08f3809b9d7f1015 944 SMART SM00382 631 920 0.0058 T 01-11-2018 IPR003593 AAA+ ATPase domain CDA09_19380 996c2b1ed7c312bf08f3809b9d7f1015 944 Gene3D G3DSA:3.40.50.300 6 594 1.5E-243 T 01-11-2018 CDA09_19380 996c2b1ed7c312bf08f3809b9d7f1015 944 SUPERFAMILY SSF52540 620 908 1.54E-50 T 01-11-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CDA09_19380 996c2b1ed7c312bf08f3809b9d7f1015 944 Gene3D G3DSA:1.20.1580.10 90 491 1.5E-243 T 01-11-2018 CDA09_19380 996c2b1ed7c312bf08f3809b9d7f1015 944 Hamap MF_00205 UvrABC system protein A [uvrA]. 1 938 22.238 T 01-11-2018 IPR004602 UvrABC system subunit A GO:0003677|GO:0006289|GO:0009380|GO:0016887 CDA09_19380 996c2b1ed7c312bf08f3809b9d7f1015 944 Gene3D G3DSA:3.40.50.300 613 934 1.8E-137 T 01-11-2018 CDA09_19380 996c2b1ed7c312bf08f3809b9d7f1015 944 ProSitePatterns PS00211 ABC transporters family signature. 828 842 - T 01-11-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 CDA09_19380 996c2b1ed7c312bf08f3809b9d7f1015 944 ProSitePatterns PS00211 ABC transporters family signature. 486 500 - T 01-11-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 CDA09_19380 996c2b1ed7c312bf08f3809b9d7f1015 944 Gene3D G3DSA:3.30.190.20 131 243 1.5E-243 T 01-11-2018 CDA09_19380 996c2b1ed7c312bf08f3809b9d7f1015 944 Gene3D G3DSA:1.20.1580.10 691 828 1.8E-137 T 01-11-2018 CDA09_19380 996c2b1ed7c312bf08f3809b9d7f1015 944 SUPERFAMILY SSF52540 3 568 1.92E-49 T 01-11-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CDA09_19380 996c2b1ed7c312bf08f3809b9d7f1015 944 Gene3D G3DSA:1.10.8.280 286 402 1.5E-243 T 01-11-2018 CDA09_08650 9b6ef0b4863c9ee4fcbe1051d53fee91 618 SUPERFAMILY SSF52518 209 482 2.75E-61 T 01-11-2018 IPR029061 Thiamin diphosphate-binding fold CDA09_08650 9b6ef0b4863c9ee4fcbe1051d53fee91 618 SUPERFAMILY SSF52922 500 601 1.0E-11 T 01-11-2018 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II GO:0003824 CDA09_08650 9b6ef0b4863c9ee4fcbe1051d53fee91 618 Gene3D G3DSA:3.40.50.970 199 402 4.1E-62 T 01-11-2018 CDA09_08650 9b6ef0b4863c9ee4fcbe1051d53fee91 618 Pfam PF01558 Pyruvate ferredoxin/flavodoxin oxidoreductase 21 187 1.0E-29 T 01-11-2018 IPR019752 Pyruvate/ketoisovalerate oxidoreductase, catalytic domain GO:0016903|GO:0055114 CDA09_08650 9b6ef0b4863c9ee4fcbe1051d53fee91 618 Pfam PF01855 Pyruvate flavodoxin/ferredoxin oxidoreductase, thiamine diP-bdg 222 391 5.7E-50 T 01-11-2018 IPR002880 Pyruvate flavodoxin/ferredoxin oxidoreductase, N-terminal GO:0016491|GO:0055114 CDA09_08650 9b6ef0b4863c9ee4fcbe1051d53fee91 618 Gene3D G3DSA:3.40.920.10 10 196 3.2E-18 T 01-11-2018 IPR002869 Pyruvate-flavodoxin oxidoreductase, central domain GO:0016491|GO:0055114 CDA09_08650 9b6ef0b4863c9ee4fcbe1051d53fee91 618 TIGRFAM TIGR03710 OAFO_sf: 2-oxoacid:acceptor oxidoreductase, alpha subunit 11 596 1.3E-177 T 01-11-2018 IPR022367 2-oxoacid:acceptor oxidoreductase, alpha subunit KEGG: 00020+1.2.7.3|KEGG: 00720+1.2.7.3|MetaCyc: PWY-5392|MetaCyc: PWY-6969 CDA09_08650 9b6ef0b4863c9ee4fcbe1051d53fee91 618 SUPERFAMILY SSF53323 14 228 1.57E-20 T 01-11-2018 IPR002869 Pyruvate-flavodoxin oxidoreductase, central domain GO:0016491|GO:0055114 CDA09_08650 9b6ef0b4863c9ee4fcbe1051d53fee91 618 Gene3D G3DSA:3.40.50.920 494 602 1.5E-12 T 01-11-2018 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II GO:0003824 CDA09_12750 a938a783ce57930670a2e68dfdc94e81 597 Pfam PF12418 Acyl-CoA dehydrogenase N terminal 3 34 4.3E-13 T 01-11-2018 IPR020953 Acyl-CoA dehydrogenase, N-terminal, bacteria CDA09_12750 a938a783ce57930670a2e68dfdc94e81 597 Gene3D G3DSA:1.20.140.10 289 455 2.0E-47 T 01-11-2018 CDA09_12750 a938a783ce57930670a2e68dfdc94e81 597 SUPERFAMILY SSF56645 38 280 2.09E-64 T 01-11-2018 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain superfamily GO:0016627|GO:0055114 CDA09_12750 a938a783ce57930670a2e68dfdc94e81 597 Pfam PF12806 Acetyl-CoA dehydrogenase C-terminal like 467 593 2.5E-27 T 01-11-2018 IPR025878 Acetyl-CoA dehydrogenase-like C-terminal domain CDA09_12750 a938a783ce57930670a2e68dfdc94e81 597 Pfam PF00441 Acyl-CoA dehydrogenase, C-terminal domain 284 450 1.5E-24 T 01-11-2018 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal GO:0016627|GO:0055114 CDA09_12750 a938a783ce57930670a2e68dfdc94e81 597 Gene3D G3DSA:1.10.540.10 19 159 5.0E-22 T 01-11-2018 IPR037069 Acyl-CoA dehydrogenase/oxidase, N-terminal domain superfamily GO:0016627|GO:0050660|GO:0055114 CDA09_12750 a938a783ce57930670a2e68dfdc94e81 597 Pfam PF02770 Acyl-CoA dehydrogenase, middle domain 162 271 9.9E-16 T 01-11-2018 IPR006091 Acyl-CoA oxidase/dehydrogenase, central domain GO:0016627|GO:0055114 CDA09_12750 a938a783ce57930670a2e68dfdc94e81 597 SUPERFAMILY SSF47203 282 457 7.89E-44 T 01-11-2018 IPR036250 Acyl-CoA dehydrogenase-like, C-terminal GO:0016627|GO:0055114 CDA09_12750 a938a783ce57930670a2e68dfdc94e81 597 Gene3D G3DSA:2.40.110.10 160 288 2.6E-29 T 01-11-2018 CDA09_12750 a938a783ce57930670a2e68dfdc94e81 597 Pfam PF02771 Acyl-CoA dehydrogenase, N-terminal domain 39 157 2.2E-17 T 01-11-2018 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal GO:0016627|GO:0050660|GO:0055114 CDA09_12535 2e181b31d74ea2e3af5f5858078c90d8 138 SUPERFAMILY SSF51316 6 133 9.42E-60 T 01-11-2018 IPR011057 Mss4-like superfamily CDA09_12535 2e181b31d74ea2e3af5f5858078c90d8 138 Pfam PF01641 SelR domain 11 130 2.3E-55 T 01-11-2018 IPR002579 Peptide methionine sulphoxide reductase MrsB GO:0033743|GO:0055114 Reactome: R-HSA-5676934 CDA09_12535 2e181b31d74ea2e3af5f5858078c90d8 138 Gene3D G3DSA:2.170.150.20 1 133 1.9E-64 T 01-11-2018 CDA09_12535 2e181b31d74ea2e3af5f5858078c90d8 138 Hamap MF_01400 Peptide methionine sulfoxide reductase MsrB [msrB]. 8 131 36.14 T 01-11-2018 IPR002579 Peptide methionine sulphoxide reductase MrsB GO:0033743|GO:0055114 Reactome: R-HSA-5676934 CDA09_12535 2e181b31d74ea2e3af5f5858078c90d8 138 TIGRFAM TIGR00357 TIGR00357: methionine-R-sulfoxide reductase 7 132 1.0E-56 T 01-11-2018 IPR002579 Peptide methionine sulphoxide reductase MrsB GO:0033743|GO:0055114 Reactome: R-HSA-5676934 CDA09_05715 0aea6e38e70753fe4612de0b02a72e89 287 SUPERFAMILY SSF53335 88 279 4.81E-53 T 01-11-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase CDA09_05715 0aea6e38e70753fe4612de0b02a72e89 287 Pfam PF03705 CheR methyltransferase, all-alpha domain 23 75 4.5E-18 T 01-11-2018 IPR022641 Chemotaxis receptor methyltransferase CheR, N-terminal CDA09_05715 0aea6e38e70753fe4612de0b02a72e89 287 Gene3D G3DSA:3.40.50.150 87 282 8.1E-63 T 01-11-2018 CDA09_05715 0aea6e38e70753fe4612de0b02a72e89 287 SMART SM00138 22 282 2.2E-91 T 01-11-2018 IPR000780 MCP methyltransferase, CheR-type GO:0008757 CDA09_05715 0aea6e38e70753fe4612de0b02a72e89 287 SUPERFAMILY SSF47757 16 87 2.62E-21 T 01-11-2018 CDA09_05715 0aea6e38e70753fe4612de0b02a72e89 287 PRINTS PR00996 Glutamate methyltransferase family signature 150 166 2.3E-42 T 01-11-2018 IPR000780 MCP methyltransferase, CheR-type GO:0008757 CDA09_05715 0aea6e38e70753fe4612de0b02a72e89 287 PRINTS PR00996 Glutamate methyltransferase family signature 44 57 2.3E-42 T 01-11-2018 IPR000780 MCP methyltransferase, CheR-type GO:0008757 CDA09_05715 0aea6e38e70753fe4612de0b02a72e89 287 PRINTS PR00996 Glutamate methyltransferase family signature 116 136 2.3E-42 T 01-11-2018 IPR000780 MCP methyltransferase, CheR-type GO:0008757 CDA09_05715 0aea6e38e70753fe4612de0b02a72e89 287 PRINTS PR00996 Glutamate methyltransferase family signature 81 93 2.3E-42 T 01-11-2018 IPR000780 MCP methyltransferase, CheR-type GO:0008757 CDA09_05715 0aea6e38e70753fe4612de0b02a72e89 287 PRINTS PR00996 Glutamate methyltransferase family signature 241 264 2.3E-42 T 01-11-2018 IPR000780 MCP methyltransferase, CheR-type GO:0008757 CDA09_05715 0aea6e38e70753fe4612de0b02a72e89 287 PRINTS PR00996 Glutamate methyltransferase family signature 222 236 2.3E-42 T 01-11-2018 IPR000780 MCP methyltransferase, CheR-type GO:0008757 CDA09_05715 0aea6e38e70753fe4612de0b02a72e89 287 Gene3D G3DSA:1.10.155.10 11 86 3.5E-25 T 01-11-2018 IPR036804 Chemotaxis receptor methyltransferase CheR, N-terminal domain superfamily CDA09_05715 0aea6e38e70753fe4612de0b02a72e89 287 PIRSF PIRSF000410 4 283 5.7E-94 T 01-11-2018 IPR026024 Chemotaxis protein methyltransferase CheR CDA09_05715 0aea6e38e70753fe4612de0b02a72e89 287 Pfam PF01739 CheR methyltransferase, SAM binding domain 88 277 8.8E-56 T 01-11-2018 IPR022642 MCP methyltransferase, CheR-type, SAM-binding domain, C-terminal CDA09_16555 fa288c04286625c6ae69ea24b672e77e 445 Pfam PF01565 FAD binding domain 17 154 1.6E-35 T 01-11-2018 IPR006094 FAD linked oxidase, N-terminal GO:0016491|GO:0050660|GO:0055114 CDA09_16555 fa288c04286625c6ae69ea24b672e77e 445 Gene3D G3DSA:1.10.45.10 405 445 3.2E-16 T 01-11-2018 IPR016171 Vanillyl-alcohol oxidase, C-terminal subdomain 2 CDA09_16555 fa288c04286625c6ae69ea24b672e77e 445 SUPERFAMILY SSF55103 170 444 1.57E-58 T 01-11-2018 IPR016164 FAD-linked oxidase-like, C-terminal GO:0003824|GO:0050660 CDA09_16555 fa288c04286625c6ae69ea24b672e77e 445 Gene3D G3DSA:3.30.70.2740 318 404 2.1E-31 T 01-11-2018 CDA09_16555 fa288c04286625c6ae69ea24b672e77e 445 SUPERFAMILY SSF56176 2 194 2.0E-68 T 01-11-2018 IPR036318 FAD-binding, type PCMH-like superfamily GO:0050660 CDA09_16555 fa288c04286625c6ae69ea24b672e77e 445 Gene3D G3DSA:3.30.465.40 5 198 1.1E-66 T 01-11-2018 CDA09_16555 fa288c04286625c6ae69ea24b672e77e 445 Gene3D G3DSA:3.30.70.2190 199 317 7.2E-36 T 01-11-2018 CDA09_16555 fa288c04286625c6ae69ea24b672e77e 445 Pfam PF02913 FAD linked oxidases, C-terminal domain 194 444 1.1E-54 T 01-11-2018 IPR004113 FAD-linked oxidase, C-terminal GO:0003824|GO:0050660 CDA09_16135 00dc5d719d7b47b404187eb7521dba69 485 Pfam PF00374 Nickel-dependent hydrogenase 51 127 8.1E-20 T 01-11-2018 IPR001501 Nickel-dependent hydrogenase, large subunit GO:0016151 CDA09_16135 00dc5d719d7b47b404187eb7521dba69 485 Pfam PF00374 Nickel-dependent hydrogenase 281 460 2.9E-10 T 01-11-2018 IPR001501 Nickel-dependent hydrogenase, large subunit GO:0016151 CDA09_16135 00dc5d719d7b47b404187eb7521dba69 485 ProSitePatterns PS00507 Nickel-dependent hydrogenases large subunit signature 1. 51 76 - T 01-11-2018 IPR018194 Nickel-dependent hydrogenase, large subunit, nickel binding site GO:0008901|GO:0016151|GO:0055114 CDA09_16135 00dc5d719d7b47b404187eb7521dba69 485 ProSitePatterns PS00508 Nickel-dependent hydrogenases large subunit signature 2. 451 460 - T 01-11-2018 IPR018194 Nickel-dependent hydrogenase, large subunit, nickel binding site GO:0008901|GO:0016151|GO:0055114 CDA09_16135 00dc5d719d7b47b404187eb7521dba69 485 SUPERFAMILY SSF56762 11 460 8.11E-124 T 01-11-2018 IPR029014 [NiFe]-hydrogenase, large subunit Reactome: R-HSA-611105|Reactome: R-HSA-6799198 CDA09_16135 00dc5d719d7b47b404187eb7521dba69 485 Gene3D G3DSA:1.10.645.10 13 460 8.3E-97 T 01-11-2018 IPR029014 [NiFe]-hydrogenase, large subunit Reactome: R-HSA-611105|Reactome: R-HSA-6799198 CDA09_02600 28e9e9f9df46e0b0ea907c58f7a4e292 316 Pfam PF00294 pfkB family carbohydrate kinase 12 302 4.7E-41 T 01-11-2018 IPR011611 Carbohydrate kinase PfkB CDA09_02600 28e9e9f9df46e0b0ea907c58f7a4e292 316 Gene3D G3DSA:3.40.1190.20 4 309 3.6E-108 T 01-11-2018 IPR029056 Ribokinase-like CDA09_02600 28e9e9f9df46e0b0ea907c58f7a4e292 316 SUPERFAMILY SSF53613 12 314 8.42E-55 T 01-11-2018 IPR029056 Ribokinase-like CDA09_02600 28e9e9f9df46e0b0ea907c58f7a4e292 316 TIGRFAM TIGR02198 rfaE_dom_I: bifunctional protein RfaE, domain I 6 312 1.2E-119 T 01-11-2018 IPR011913 RfaE bifunctional protein, domain I GO:0005975|GO:0016773|GO:0016779 KEGG: 00540+2.7.7.70+2.7.1.167 CDA09_03885 c4573abd81525077a75948fd82e8cefa 313 Gene3D G3DSA:3.90.79.10 2 129 5.8E-36 T 01-11-2018 CDA09_03885 c4573abd81525077a75948fd82e8cefa 313 PRINTS PR00502 NUDIX hydrolase family signature 48 63 5.3E-8 T 01-11-2018 IPR020476 NUDIX hydrolase Reactome: R-HSA-2393930 CDA09_03885 c4573abd81525077a75948fd82e8cefa 313 PRINTS PR00502 NUDIX hydrolase family signature 34 48 5.3E-8 T 01-11-2018 IPR020476 NUDIX hydrolase Reactome: R-HSA-2393930 CDA09_03885 c4573abd81525077a75948fd82e8cefa 313 Gene3D G3DSA:3.20.20.70 130 313 1.9E-45 T 01-11-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 CDA09_03885 c4573abd81525077a75948fd82e8cefa 313 SUPERFAMILY SSF55811 3 127 4.87E-33 T 01-11-2018 IPR015797 NUDIX hydrolase-like domain superfamily GO:0016787 CDA09_03885 c4573abd81525077a75948fd82e8cefa 313 Pfam PF02581 Thiamine monophosphate synthase 136 307 1.8E-40 T 01-11-2018 IPR022998 Thiamine phosphate synthase/TenI KEGG: 00730+2.5.1.3|MetaCyc: PWY-6893|MetaCyc: PWY-6894|MetaCyc: PWY-6897|MetaCyc: PWY-6907|MetaCyc: PWY-6908|MetaCyc: PWY-7356|MetaCyc: PWY-7357 CDA09_03885 c4573abd81525077a75948fd82e8cefa 313 SUPERFAMILY SSF51391 115 310 9.94E-48 T 01-11-2018 IPR036206 Thiamin phosphate synthase superfamily KEGG: 00730+2.5.1.3|MetaCyc: PWY-6893|MetaCyc: PWY-6894|MetaCyc: PWY-6897|MetaCyc: PWY-6907|MetaCyc: PWY-6908|MetaCyc: PWY-7356|MetaCyc: PWY-7357 CDA09_03885 c4573abd81525077a75948fd82e8cefa 313 Pfam PF00293 NUDIX domain 7 125 5.8E-20 T 01-11-2018 IPR000086 NUDIX hydrolase domain GO:0016787 CDA09_03885 c4573abd81525077a75948fd82e8cefa 313 ProSitePatterns PS00893 Nudix box signature. 39 60 - T 01-11-2018 IPR020084 NUDIX hydrolase, conserved site GO:0016787 CDA09_22595 f0a17bd2e1833fe9c5852072facec814 272 SUPERFAMILY SSF52096 10 271 4.33E-76 T 01-11-2018 IPR029045 ClpP/crotonase-like domain superfamily CDA09_22595 f0a17bd2e1833fe9c5852072facec814 272 Gene3D G3DSA:1.10.12.10 214 272 3.4E-19 T 01-11-2018 IPR014748 Enoyl-CoA hydratase, C-terminal CDA09_22595 f0a17bd2e1833fe9c5852072facec814 272 Pfam PF00378 Enoyl-CoA hydratase/isomerase 20 271 8.0E-47 T 01-11-2018 IPR001753 Enoyl-CoA hydratase/isomerase GO:0003824 CDA09_22595 f0a17bd2e1833fe9c5852072facec814 272 ProSitePatterns PS00166 Enoyl-CoA hydratase/isomerase signature. 112 132 - T 01-11-2018 IPR018376 Enoyl-CoA hydratase/isomerase, conserved site GO:0003824 CDA09_22595 f0a17bd2e1833fe9c5852072facec814 272 Gene3D G3DSA:3.90.226.10 3 213 3.6E-65 T 01-11-2018 CDA09_10755 e5afa86093e0eaa7d914acc692b247df 178 TIGRFAM TIGR00778 ahpD_dom: alkylhydroperoxidase AhpD family core domain 57 107 9.4E-11 T 01-11-2018 IPR004675 Alkylhydroperoxidase AhpD core GO:0051920|GO:0055114 KEGG: 00480+1.11.1.15 CDA09_10755 e5afa86093e0eaa7d914acc692b247df 178 Pfam PF02627 Carboxymuconolactone decarboxylase family 41 118 1.1E-12 T 01-11-2018 IPR003779 Carboxymuconolactone decarboxylase-like GO:0051920|GO:0055114 KEGG: 00480+1.11.1.15 CDA09_10755 e5afa86093e0eaa7d914acc692b247df 178 SUPERFAMILY SSF69118 1 175 1.12E-44 T 01-11-2018 IPR029032 AhpD-like Reactome: R-HSA-5628897 CDA09_10755 e5afa86093e0eaa7d914acc692b247df 178 Gene3D G3DSA:1.20.1290.10 13 177 1.9E-41 T 01-11-2018 IPR029032 AhpD-like Reactome: R-HSA-5628897 CDA09_05015 4171ecea5595f7477f508bc09fe10a85 385 Pfam PF01494 FAD binding domain 5 328 1.2E-16 T 01-11-2018 IPR002938 FAD-binding domain GO:0071949 CDA09_05015 4171ecea5595f7477f508bc09fe10a85 385 Gene3D G3DSA:3.50.50.60 5 327 1.5E-70 T 01-11-2018 IPR036188 FAD/NAD(P)-binding domain superfamily CDA09_05015 4171ecea5595f7477f508bc09fe10a85 385 SUPERFAMILY SSF51905 4 374 2.16E-42 T 01-11-2018 IPR036188 FAD/NAD(P)-binding domain superfamily CDA09_05015 4171ecea5595f7477f508bc09fe10a85 385 TIGRFAM TIGR01988 Ubi-OHases: ubiquinone biosynthesis hydroxylase, UbiH/UbiF/VisC/COQ6 family 5 378 3.4E-90 T 01-11-2018 IPR010971 Ubiquinone biosynthesis hydroxylase UbiH/COQ6 GO:0006744|GO:0016709|GO:0050660|GO:0055114 Reactome: R-HSA-2142789 CDA09_05015 4171ecea5595f7477f508bc09fe10a85 385 Gene3D G3DSA:3.30.9.50 73 261 1.5E-70 T 01-11-2018 CDA09_05015 4171ecea5595f7477f508bc09fe10a85 385 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 5 27 1.2E-12 T 01-11-2018 CDA09_05015 4171ecea5595f7477f508bc09fe10a85 385 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 272 287 1.2E-12 T 01-11-2018 CDA09_05015 4171ecea5595f7477f508bc09fe10a85 385 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 287 303 1.2E-12 T 01-11-2018 CDA09_18225 62b6d0a549adfd8c72aef3135518cf10 312 Pfam PF01795 MraW methylase family 6 307 4.3E-105 T 01-11-2018 IPR002903 Ribosomal RNA small subunit methyltransferase H GO:0008168 CDA09_18225 62b6d0a549adfd8c72aef3135518cf10 312 SUPERFAMILY SSF81799 113 212 8.24E-31 T 01-11-2018 IPR023397 S-adenosyl-L-methionine-dependent methyltransferase, MraW, recognition domain superfamily GO:0008168 CDA09_18225 62b6d0a549adfd8c72aef3135518cf10 312 Gene3D G3DSA:3.40.50.150 10 307 7.5E-102 T 01-11-2018 CDA09_18225 62b6d0a549adfd8c72aef3135518cf10 312 SUPERFAMILY SSF53335 7 308 4.45E-49 T 01-11-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase CDA09_18225 62b6d0a549adfd8c72aef3135518cf10 312 Hamap MF_01007 Ribosomal RNA small subunit methyltransferase H [rsmH]. 7 308 37.394 T 01-11-2018 IPR002903 Ribosomal RNA small subunit methyltransferase H GO:0008168 CDA09_18225 62b6d0a549adfd8c72aef3135518cf10 312 PIRSF PIRSF004486 1 309 2.0E-97 T 01-11-2018 IPR002903 Ribosomal RNA small subunit methyltransferase H GO:0008168 CDA09_18225 62b6d0a549adfd8c72aef3135518cf10 312 TIGRFAM TIGR00006 TIGR00006: 16S rRNA (cytosine(1402)-N(4))-methyltransferase 6 307 1.9E-109 T 01-11-2018 IPR002903 Ribosomal RNA small subunit methyltransferase H GO:0008168 CDA09_18225 62b6d0a549adfd8c72aef3135518cf10 312 Gene3D G3DSA:1.10.150.170 111 213 7.5E-102 T 01-11-2018 IPR023397 S-adenosyl-L-methionine-dependent methyltransferase, MraW, recognition domain superfamily GO:0008168 CDA09_14910 13517421775147bd71f7eb2f6ec98db1 397 Pfam PF00155 Aminotransferase class I and II 31 390 3.8E-44 T 01-11-2018 IPR004839 Aminotransferase, class I/classII GO:0009058|GO:0030170 CDA09_14910 13517421775147bd71f7eb2f6ec98db1 397 Gene3D G3DSA:3.40.640.10 43 291 2.4E-114 T 01-11-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 CDA09_14910 13517421775147bd71f7eb2f6ec98db1 397 SUPERFAMILY SSF53383 2 395 1.27E-90 T 01-11-2018 IPR015424 Pyridoxal phosphate-dependent transferase CDA09_14910 13517421775147bd71f7eb2f6ec98db1 397 Gene3D G3DSA:3.90.1150.10 13 383 2.4E-114 T 01-11-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 CDA09_14910 13517421775147bd71f7eb2f6ec98db1 397 TIGRFAM TIGR03538 DapC_gpp: succinyldiaminopimelate transaminase 1 394 1.3E-195 T 01-11-2018 IPR019878 Succinyldiaminopimelate transaminase, DapC, beta/gammaproteobacteria GO:0009016|GO:0009089 CDA09_15150 986eb0f62031de27aac9d9e4dc10b66c 334 TIGRFAM TIGR02775 TrbG_Ti: P-type conjugative transfer protein TrbG 108 315 2.4E-89 T 01-11-2018 IPR014142 P-type conjugative transfer protein TrbG CDA09_15150 986eb0f62031de27aac9d9e4dc10b66c 334 Pfam PF03524 Conjugal transfer protein 107 326 1.1E-63 T 01-11-2018 IPR010258 Conjugal transfer, TrbG/VirB9/CagX CDA09_15150 986eb0f62031de27aac9d9e4dc10b66c 334 Gene3D G3DSA:2.60.40.2500 234 329 5.0E-7 T 01-11-2018 IPR038161 VirB9/CagX/TrbG, C-terminal domain superfamily CDA09_16150 4bc2a421c30fa51a4f5ea1bddc9ed302 597 Pfam PF10589 NADH-ubiquinone oxidoreductase-F iron-sulfur binding region 475 558 2.0E-24 T 01-11-2018 IPR019575 NADH-ubiquinone oxidoreductase 51kDa subunit, iron-sulphur binding domain GO:0051539 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 CDA09_16150 4bc2a421c30fa51a4f5ea1bddc9ed302 597 Gene3D G3DSA:1.10.10.1590 1 69 2.7E-10 T 01-11-2018 CDA09_16150 4bc2a421c30fa51a4f5ea1bddc9ed302 597 Gene3D G3DSA:3.40.30.10 70 164 2.3E-10 T 01-11-2018 CDA09_16150 4bc2a421c30fa51a4f5ea1bddc9ed302 597 SUPERFAMILY SSF52833 7 172 1.9E-35 T 01-11-2018 IPR036249 Thioredoxin-like superfamily CDA09_16150 4bc2a421c30fa51a4f5ea1bddc9ed302 597 Gene3D G3DSA:1.20.1440.230 474 568 1.7E-25 T 01-11-2018 IPR037207 NADH-ubiquinone oxidoreductase 51kDa subunit, iron-sulphur binding domain superfamily Reactome: R-HSA-611105|Reactome: R-HSA-6799198 CDA09_16150 4bc2a421c30fa51a4f5ea1bddc9ed302 597 Gene3D G3DSA:3.10.20.600 388 469 2.0E-14 T 01-11-2018 CDA09_16150 4bc2a421c30fa51a4f5ea1bddc9ed302 597 SUPERFAMILY SSF142984 397 468 1.24E-12 T 01-11-2018 CDA09_16150 4bc2a421c30fa51a4f5ea1bddc9ed302 597 Gene3D G3DSA:3.40.50.11540 208 387 1.2E-73 T 01-11-2018 IPR037225 NADH-ubiquinone oxidoreductase 51kDa subunit, FMN-binding domain superfamily Reactome: R-HSA-611105|Reactome: R-HSA-6799198 CDA09_16150 4bc2a421c30fa51a4f5ea1bddc9ed302 597 SUPERFAMILY SSF142019 191 396 4.32E-70 T 01-11-2018 IPR037225 NADH-ubiquinone oxidoreductase 51kDa subunit, FMN-binding domain superfamily Reactome: R-HSA-611105|Reactome: R-HSA-6799198 CDA09_16150 4bc2a421c30fa51a4f5ea1bddc9ed302 597 SUPERFAMILY SSF140490 471 561 3.01E-28 T 01-11-2018 IPR037207 NADH-ubiquinone oxidoreductase 51kDa subunit, iron-sulphur binding domain superfamily Reactome: R-HSA-611105|Reactome: R-HSA-6799198 CDA09_16150 4bc2a421c30fa51a4f5ea1bddc9ed302 597 Pfam PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit 204 373 5.7E-45 T 01-11-2018 IPR011538 NADH-ubiquinone oxidoreductase 51kDa subunit, FMN-binding domain Reactome: R-HSA-611105|Reactome: R-HSA-6799198 CDA09_16150 4bc2a421c30fa51a4f5ea1bddc9ed302 597 SMART SM00928 474 519 6.5E-19 T 01-11-2018 IPR019575 NADH-ubiquinone oxidoreductase 51kDa subunit, iron-sulphur binding domain GO:0051539 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 CDA09_16150 4bc2a421c30fa51a4f5ea1bddc9ed302 597 ProSitePatterns PS00645 Respiratory-chain NADH dehydrogenase 51 Kd subunit signature 2. 487 498 - T 01-11-2018 IPR001949 NADH:ubiquinone oxidoreductase, 51kDa subunit, conserved site GO:0008137|GO:0010181|GO:0051539|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 CDA09_16150 4bc2a421c30fa51a4f5ea1bddc9ed302 597 ProSitePatterns PS00644 Respiratory-chain NADH dehydrogenase 51 Kd subunit signature 1. 323 338 - T 01-11-2018 IPR001949 NADH:ubiquinone oxidoreductase, 51kDa subunit, conserved site GO:0008137|GO:0010181|GO:0051539|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 CDA09_16150 4bc2a421c30fa51a4f5ea1bddc9ed302 597 Pfam PF01257 Thioredoxin-like [2Fe-2S] ferredoxin 10 148 3.7E-30 T 01-11-2018 CDA09_16715 a431725330827ea59ce56875501ee73f 486 SUPERFAMILY SSF53850 38 259 1.96E-33 T 01-11-2018 CDA09_16715 a431725330827ea59ce56875501ee73f 486 ProSitePatterns PS00922 Prokaryotic transglycosylases signature. 303 331 - T 01-11-2018 IPR000189 Prokaryotic transglycosylase, active site GO:0000270|GO:0008933|GO:0016020 CDA09_16715 a431725330827ea59ce56875501ee73f 486 Pfam PF00497 Bacterial extracellular solute-binding proteins, family 3 38 259 6.6E-29 T 01-11-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF CDA09_16715 a431725330827ea59ce56875501ee73f 486 Gene3D G3DSA:1.10.530.10 268 422 1.3E-30 T 01-11-2018 CDA09_16715 a431725330827ea59ce56875501ee73f 486 Pfam PF01464 Transglycosylase SLT domain 286 394 2.6E-21 T 01-11-2018 IPR008258 Transglycosylase SLT domain 1 CDA09_16715 a431725330827ea59ce56875501ee73f 486 Gene3D G3DSA:3.40.190.10 121 216 6.3E-40 T 01-11-2018 CDA09_16715 a431725330827ea59ce56875501ee73f 486 SUPERFAMILY SSF53955 246 391 3.18E-34 T 01-11-2018 IPR023346 Lysozyme-like domain superfamily CDA09_16715 a431725330827ea59ce56875501ee73f 486 Gene3D G3DSA:3.40.190.10 34 255 6.3E-40 T 01-11-2018 CDA09_16715 a431725330827ea59ce56875501ee73f 486 SMART SM00062 37 260 1.6E-17 T 01-11-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF CDA09_19240 183ffbcb0f0d6fb858deb39aca3f8f89 292 Gene3D G3DSA:3.40.50.720 1 161 6.9E-50 T 01-11-2018 CDA09_19240 183ffbcb0f0d6fb858deb39aca3f8f89 292 Pfam PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase 164 284 1.5E-31 T 01-11-2018 IPR029154 3-hydroxyisobutyrate dehydrogenase, NAD-binding domain GO:0051287 CDA09_19240 183ffbcb0f0d6fb858deb39aca3f8f89 292 ProSitePatterns PS00895 3-hydroxyisobutyrate dehydrogenase signature. 5 18 - T 01-11-2018 IPR002204 3-hydroxyisobutyrate dehydrogenase-related, conserved site GO:0016491|GO:0055114 Reactome: R-HSA-70895 CDA09_19240 183ffbcb0f0d6fb858deb39aca3f8f89 292 SUPERFAMILY SSF48179 162 288 7.74E-34 T 01-11-2018 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily GO:0055114 CDA09_19240 183ffbcb0f0d6fb858deb39aca3f8f89 292 Gene3D G3DSA:1.10.1040.10 162 290 9.2E-35 T 01-11-2018 IPR013328 6-phosphogluconate dehydrogenase, domain 2 GO:0016491|GO:0055114 CDA09_19240 183ffbcb0f0d6fb858deb39aca3f8f89 292 SUPERFAMILY SSF51735 1 162 1.28E-40 T 01-11-2018 IPR036291 NAD(P)-binding domain superfamily CDA09_19240 183ffbcb0f0d6fb858deb39aca3f8f89 292 PIRSF PIRSF000103 1 292 3.6E-71 T 01-11-2018 IPR015815 3-hydroxyisobutyrate dehydrogenase-related GO:0016491|GO:0055114 Reactome: R-HSA-70895 CDA09_19240 183ffbcb0f0d6fb858deb39aca3f8f89 292 Pfam PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase 2 161 2.7E-42 T 01-11-2018 IPR006115 6-phosphogluconate dehydrogenase, NADP-binding GO:0050661 CDA09_21800 c4dc6b3b6f3a8bc236300057a08578f4 398 Gene3D G3DSA:3.40.47.10 130 394 4.4E-136 T 01-11-2018 IPR016039 Thiolase-like GO:0003824 CDA09_21800 c4dc6b3b6f3a8bc236300057a08578f4 398 TIGRFAM TIGR01930 AcCoA-C-Actrans: acetyl-CoA C-acyltransferase 11 394 1.4E-126 T 01-11-2018 IPR002155 Thiolase GO:0016747 CDA09_21800 c4dc6b3b6f3a8bc236300057a08578f4 398 Pfam PF00108 Thiolase, N-terminal domain 8 266 3.6E-78 T 01-11-2018 IPR020616 Thiolase, N-terminal GO:0016747 CDA09_21800 c4dc6b3b6f3a8bc236300057a08578f4 398 SUPERFAMILY SSF53901 276 396 5.76E-35 T 01-11-2018 IPR016039 Thiolase-like GO:0003824 CDA09_21800 c4dc6b3b6f3a8bc236300057a08578f4 398 SUPERFAMILY SSF53901 7 270 1.41E-74 T 01-11-2018 IPR016039 Thiolase-like GO:0003824 CDA09_21800 c4dc6b3b6f3a8bc236300057a08578f4 398 Gene3D G3DSA:3.40.47.10 11 280 4.4E-136 T 01-11-2018 IPR016039 Thiolase-like GO:0003824 CDA09_21800 c4dc6b3b6f3a8bc236300057a08578f4 398 PIRSF PIRSF000429 2 398 3.7E-118 T 01-11-2018 IPR002155 Thiolase GO:0016747 CDA09_21800 c4dc6b3b6f3a8bc236300057a08578f4 398 Pfam PF02803 Thiolase, C-terminal domain 278 395 1.0E-42 T 01-11-2018 IPR020617 Thiolase, C-terminal GO:0016747 CDA09_22670 f9b79a0d79e42f5fc4ec9d28d0f31cdd 56 SUPERFAMILY SSF57802 2 50 1.27E-17 T 01-11-2018 CDA09_22670 f9b79a0d79e42f5fc4ec9d28d0f31cdd 56 ProSitePatterns PS00202 Rubredoxin signature. 33 43 - T 01-11-2018 IPR018527 Rubredoxin, iron-binding site GO:0046872 CDA09_22670 f9b79a0d79e42f5fc4ec9d28d0f31cdd 56 Gene3D G3DSA:2.20.28.10 1 55 3.4E-21 T 01-11-2018 CDA09_22670 f9b79a0d79e42f5fc4ec9d28d0f31cdd 56 Pfam PF00301 Rubredoxin 5 49 1.1E-18 T 01-11-2018 IPR024935 Rubredoxin domain GO:0005506 CDA09_22670 f9b79a0d79e42f5fc4ec9d28d0f31cdd 56 PRINTS PR00163 Rubredoxin signature 3 19 4.0E-5 T 01-11-2018 IPR024935 Rubredoxin domain GO:0005506 CDA09_22670 f9b79a0d79e42f5fc4ec9d28d0f31cdd 56 PRINTS PR00163 Rubredoxin signature 33 49 4.0E-5 T 01-11-2018 IPR024935 Rubredoxin domain GO:0005506 CDA09_14200 2978cc1543642101157d0faff261dcef 365 Gene3D G3DSA:3.40.50.150 20 205 3.4E-13 T 01-11-2018 CDA09_14200 2978cc1543642101157d0faff261dcef 365 SUPERFAMILY SSF53335 18 184 1.74E-20 T 01-11-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase CDA09_14200 2978cc1543642101157d0faff261dcef 365 PRINTS PR00507 N12 class N6 adenine-specific DNA methyltransferase signature 129 153 4.5E-8 T 01-11-2018 CDA09_14200 2978cc1543642101157d0faff261dcef 365 PRINTS PR00507 N12 class N6 adenine-specific DNA methyltransferase signature 41 55 4.5E-8 T 01-11-2018 CDA09_14200 2978cc1543642101157d0faff261dcef 365 PRINTS PR00507 N12 class N6 adenine-specific DNA methyltransferase signature 103 115 4.5E-8 T 01-11-2018 CDA09_14200 2978cc1543642101157d0faff261dcef 365 ProSitePatterns PS00092 N-6 Adenine-specific DNA methylases signature. 106 112 - T 01-11-2018 IPR002052 DNA methylase, N-6 adenine-specific, conserved site GO:0003676|GO:0008168|GO:0032259 CDA09_18745 96749e94430f760da259ef7dea39f54e 325 ProSitePatterns PS00097 Aspartate and ornithine carbamoyltransferases signature. 59 66 - T 01-11-2018 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 CDA09_18745 96749e94430f760da259ef7dea39f54e 325 SUPERFAMILY SSF53671 12 318 8.51E-91 T 01-11-2018 IPR036901 Aspartate/ornithine carbamoyltransferase superfamily GO:0006520|GO:0016597|GO:0016743 CDA09_18745 96749e94430f760da259ef7dea39f54e 325 Pfam PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain 169 315 7.9E-24 T 01-11-2018 IPR006131 Aspartate/ornithine carbamoyltransferase, Asp/Orn-binding domain GO:0006520|GO:0016597|GO:0016743 CDA09_18745 96749e94430f760da259ef7dea39f54e 325 TIGRFAM TIGR00670 asp_carb_tr: aspartate carbamoyltransferase 13 316 1.5E-90 T 01-11-2018 IPR002082 Aspartate carbamoyltransferase GO:0004070|GO:0006207 KEGG: 00240+2.1.3.2|KEGG: 00250+2.1.3.2|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791|Reactome: R-HSA-500753 CDA09_18745 96749e94430f760da259ef7dea39f54e 325 Hamap MF_00001 Aspartate carbamoyltransferase [pyrB]. 12 319 40.159 T 01-11-2018 IPR002082 Aspartate carbamoyltransferase GO:0004070|GO:0006207 KEGG: 00240+2.1.3.2|KEGG: 00250+2.1.3.2|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791|Reactome: R-HSA-500753 CDA09_18745 96749e94430f760da259ef7dea39f54e 325 Gene3D G3DSA:3.40.50.1370 18 312 3.0E-86 T 01-11-2018 IPR036901 Aspartate/ornithine carbamoyltransferase superfamily GO:0006520|GO:0016597|GO:0016743 CDA09_18745 96749e94430f760da259ef7dea39f54e 325 PRINTS PR00101 Aspartate carbamoyltransferase signature 49 71 1.5E-28 T 01-11-2018 IPR002082 Aspartate carbamoyltransferase GO:0004070|GO:0006207 KEGG: 00240+2.1.3.2|KEGG: 00250+2.1.3.2|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791|Reactome: R-HSA-500753 CDA09_18745 96749e94430f760da259ef7dea39f54e 325 PRINTS PR00101 Aspartate carbamoyltransferase signature 298 312 1.5E-28 T 01-11-2018 IPR002082 Aspartate carbamoyltransferase GO:0004070|GO:0006207 KEGG: 00240+2.1.3.2|KEGG: 00250+2.1.3.2|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791|Reactome: R-HSA-500753 CDA09_18745 96749e94430f760da259ef7dea39f54e 325 PRINTS PR00101 Aspartate carbamoyltransferase signature 87 96 1.5E-28 T 01-11-2018 IPR002082 Aspartate carbamoyltransferase GO:0004070|GO:0006207 KEGG: 00240+2.1.3.2|KEGG: 00250+2.1.3.2|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791|Reactome: R-HSA-500753 CDA09_18745 96749e94430f760da259ef7dea39f54e 325 PRINTS PR00101 Aspartate carbamoyltransferase signature 274 279 1.5E-28 T 01-11-2018 IPR002082 Aspartate carbamoyltransferase GO:0004070|GO:0006207 KEGG: 00240+2.1.3.2|KEGG: 00250+2.1.3.2|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791|Reactome: R-HSA-500753 CDA09_18745 96749e94430f760da259ef7dea39f54e 325 PRINTS PR00101 Aspartate carbamoyltransferase signature 148 165 1.5E-28 T 01-11-2018 IPR002082 Aspartate carbamoyltransferase GO:0004070|GO:0006207 KEGG: 00240+2.1.3.2|KEGG: 00250+2.1.3.2|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791|Reactome: R-HSA-500753 CDA09_18745 96749e94430f760da259ef7dea39f54e 325 PRINTS PR00101 Aspartate carbamoyltransferase signature 233 242 1.5E-28 T 01-11-2018 IPR002082 Aspartate carbamoyltransferase GO:0004070|GO:0006207 KEGG: 00240+2.1.3.2|KEGG: 00250+2.1.3.2|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791|Reactome: R-HSA-500753 CDA09_18745 96749e94430f760da259ef7dea39f54e 325 Gene3D G3DSA:3.40.50.1370 149 296 3.0E-86 T 01-11-2018 IPR036901 Aspartate/ornithine carbamoyltransferase superfamily GO:0006520|GO:0016597|GO:0016743 CDA09_18745 96749e94430f760da259ef7dea39f54e 325 Pfam PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain 13 161 4.8E-37 T 01-11-2018 IPR006132 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding GO:0006520|GO:0016743 CDA09_18745 96749e94430f760da259ef7dea39f54e 325 PRINTS PR00100 Aspartate/ornithine carbamoyltransferase superfamily signature 149 160 1.5E-17 T 01-11-2018 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 CDA09_18745 96749e94430f760da259ef7dea39f54e 325 PRINTS PR00100 Aspartate/ornithine carbamoyltransferase superfamily signature 59 78 1.5E-17 T 01-11-2018 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 CDA09_18745 96749e94430f760da259ef7dea39f54e 325 PRINTS PR00100 Aspartate/ornithine carbamoyltransferase superfamily signature 282 305 1.5E-17 T 01-11-2018 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 CDA09_18745 96749e94430f760da259ef7dea39f54e 325 PRINTS PR00100 Aspartate/ornithine carbamoyltransferase superfamily signature 270 279 1.5E-17 T 01-11-2018 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 CDA09_17840 1eb1e804e33fef2903517f58cf6e4c80 200 SUPERFAMILY SSF141868 4 197 3.66E-30 T 01-11-2018 IPR035919 EAL domain superfamily CDA09_17840 1eb1e804e33fef2903517f58cf6e4c80 200 SMART SM00052 1 200 2.7E-5 T 01-11-2018 IPR001633 EAL domain CDA09_17840 1eb1e804e33fef2903517f58cf6e4c80 200 Pfam PF00563 EAL domain 4 195 2.4E-15 T 01-11-2018 IPR001633 EAL domain CDA09_17840 1eb1e804e33fef2903517f58cf6e4c80 200 Gene3D G3DSA:3.20.20.450 2 200 4.4E-20 T 01-11-2018 IPR035919 EAL domain superfamily CDA09_04375 19633d4a9d173f6d24513f4ae7369260 297 PIRSF PIRSF001553 1 297 1.1E-110 T 01-11-2018 IPR005810 Succinyl-CoA ligase, alpha subunit GO:0003824 KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384|Reactome: R-HSA-71403 CDA09_04375 19633d4a9d173f6d24513f4ae7369260 297 PRINTS PR01798 Succinyl-CoA synthase signature 186 204 1.0E-31 T 01-11-2018 CDA09_04375 19633d4a9d173f6d24513f4ae7369260 297 PRINTS PR01798 Succinyl-CoA synthase signature 217 230 1.0E-31 T 01-11-2018 CDA09_04375 19633d4a9d173f6d24513f4ae7369260 297 PRINTS PR01798 Succinyl-CoA synthase signature 249 266 1.0E-31 T 01-11-2018 CDA09_04375 19633d4a9d173f6d24513f4ae7369260 297 PRINTS PR01798 Succinyl-CoA synthase signature 85 102 1.0E-31 T 01-11-2018 CDA09_04375 19633d4a9d173f6d24513f4ae7369260 297 Gene3D G3DSA:3.40.50.720 2 132 2.4E-41 T 01-11-2018 CDA09_04375 19633d4a9d173f6d24513f4ae7369260 297 SUPERFAMILY SSF52210 132 296 7.33E-53 T 01-11-2018 IPR016102 Succinyl-CoA synthetase-like KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384 CDA09_04375 19633d4a9d173f6d24513f4ae7369260 297 ProSitePatterns PS00399 ATP-citrate lyase / succinyl-CoA ligases family active site. 245 258 - T 01-11-2018 IPR017440 ATP-citrate lyase/succinyl-CoA ligase, active site CDA09_04375 19633d4a9d173f6d24513f4ae7369260 297 TIGRFAM TIGR01019 sucCoAalpha: succinate-CoA ligase, alpha subunit 3 297 9.1E-123 T 01-11-2018 IPR005810 Succinyl-CoA ligase, alpha subunit GO:0003824 KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384|Reactome: R-HSA-71403 CDA09_04375 19633d4a9d173f6d24513f4ae7369260 297 Hamap MF_01988 Succinate--CoA ligase [ADP-forming] subunit alpha [sucD]. 1 297 39.009 T 01-11-2018 IPR005810 Succinyl-CoA ligase, alpha subunit GO:0003824 KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384|Reactome: R-HSA-71403 CDA09_04375 19633d4a9d173f6d24513f4ae7369260 297 Gene3D G3DSA:3.40.50.261 133 297 6.2E-65 T 01-11-2018 IPR016102 Succinyl-CoA synthetase-like KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384 CDA09_04375 19633d4a9d173f6d24513f4ae7369260 297 SUPERFAMILY SSF51735 1 117 1.33E-34 T 01-11-2018 IPR036291 NAD(P)-binding domain superfamily CDA09_04375 19633d4a9d173f6d24513f4ae7369260 297 Pfam PF00549 CoA-ligase 160 271 8.5E-15 T 01-11-2018 IPR005811 ATP-citrate lyase/succinyl-CoA ligase GO:0003824 KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384 CDA09_04375 19633d4a9d173f6d24513f4ae7369260 297 SMART SM00881 4 103 5.0E-29 T 01-11-2018 IPR003781 CoA-binding GO:0048037 CDA09_04375 19633d4a9d173f6d24513f4ae7369260 297 ProSitePatterns PS01216 ATP-citrate lyase / succinyl-CoA ligases family signature 1. 161 190 - T 01-11-2018 IPR033847 ATP-citrate lyase/succinyl-CoA ligase, conserved site CDA09_04375 19633d4a9d173f6d24513f4ae7369260 297 Pfam PF02629 CoA binding domain 6 102 3.3E-22 T 01-11-2018 IPR003781 CoA-binding GO:0048037 CDA09_07825 691b99528e605eeacff02dc5f38c2231 215 Gene3D G3DSA:3.40.50.12740 8 213 2.2E-54 T 01-11-2018 CDA09_07825 691b99528e605eeacff02dc5f38c2231 215 SMART SM00448 8 120 2.9E-29 T 01-11-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 CDA09_07825 691b99528e605eeacff02dc5f38c2231 215 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 167 183 3.7E-6 T 01-11-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 CDA09_07825 691b99528e605eeacff02dc5f38c2231 215 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 153 167 3.7E-6 T 01-11-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 CDA09_07825 691b99528e605eeacff02dc5f38c2231 215 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 183 195 3.7E-6 T 01-11-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 CDA09_07825 691b99528e605eeacff02dc5f38c2231 215 SMART SM00421 150 207 1.4E-11 T 01-11-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 CDA09_07825 691b99528e605eeacff02dc5f38c2231 215 Pfam PF00196 Bacterial regulatory proteins, luxR family 152 207 4.8E-13 T 01-11-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 CDA09_07825 691b99528e605eeacff02dc5f38c2231 215 SUPERFAMILY SSF52172 7 135 9.39E-33 T 01-11-2018 IPR011006 CheY-like superfamily CDA09_07825 691b99528e605eeacff02dc5f38c2231 215 SUPERFAMILY SSF46894 147 213 3.4E-16 T 01-11-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 CDA09_07825 691b99528e605eeacff02dc5f38c2231 215 Pfam PF00072 Response regulator receiver domain 11 120 4.9E-26 T 01-11-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 CDA09_19920 26c8e65ad7b92d43c702d19867016b4d 720 TIGRFAM TIGR00640 acid_CoA_mut_C: methylmalonyl-CoA mutase C-terminal domain 588 717 6.7E-58 T 01-11-2018 IPR006159 Methylmalonyl-CoA mutase, C-terminal GO:0016853 Reactome: R-HSA-196741|Reactome: R-HSA-3359475|Reactome: R-HSA-3359478|Reactome: R-HSA-71032 CDA09_19920 26c8e65ad7b92d43c702d19867016b4d 720 Gene3D G3DSA:3.40.50.280 573 720 7.2E-50 T 01-11-2018 CDA09_19920 26c8e65ad7b92d43c702d19867016b4d 720 SUPERFAMILY SSF51703 8 551 6.67E-230 T 01-11-2018 IPR016176 Cobalamin (vitamin B12)-dependent enzyme, catalytic GO:0003824|GO:0031419 Reactome: R-HSA-196741|Reactome: R-HSA-3359475|Reactome: R-HSA-3359478|Reactome: R-HSA-71032 CDA09_19920 26c8e65ad7b92d43c702d19867016b4d 720 Gene3D G3DSA:3.20.20.240 3 568 6.5E-248 T 01-11-2018 CDA09_19920 26c8e65ad7b92d43c702d19867016b4d 720 TIGRFAM TIGR00641 acid_CoA_mut_N: methylmalonyl-CoA mutase N-terminal domain 35 556 1.4E-272 T 01-11-2018 IPR006098 Methylmalonyl-CoA mutase, alpha chain, catalytic GO:0004494|GO:0031419 Reactome: R-HSA-196741|Reactome: R-HSA-3359475|Reactome: R-HSA-3359478|Reactome: R-HSA-71032 CDA09_19920 26c8e65ad7b92d43c702d19867016b4d 720 Pfam PF02310 B12 binding domain 591 701 2.6E-13 T 01-11-2018 IPR006158 Cobalamin (vitamin B12)-binding domain GO:0031419|GO:0046872 Reactome: R-HSA-196741 CDA09_19920 26c8e65ad7b92d43c702d19867016b4d 720 ProSitePatterns PS00544 Methylmalonyl-CoA mutase signature. 378 403 - T 01-11-2018 IPR006099 Methylmalonyl-CoA mutase, alpha/beta chain, catalytic GO:0016866|GO:0031419 Reactome: R-HSA-196741|Reactome: R-HSA-3359475|Reactome: R-HSA-3359478|Reactome: R-HSA-71032 CDA09_19920 26c8e65ad7b92d43c702d19867016b4d 720 SUPERFAMILY SSF52242 557 715 4.45E-57 T 01-11-2018 IPR036724 Cobalamin-binding domain superfamily GO:0031419|GO:0046872 Reactome: R-HSA-196741 CDA09_19920 26c8e65ad7b92d43c702d19867016b4d 720 Pfam PF01642 Methylmalonyl-CoA mutase 37 549 8.2E-243 T 01-11-2018 IPR006099 Methylmalonyl-CoA mutase, alpha/beta chain, catalytic GO:0016866|GO:0031419 Reactome: R-HSA-196741|Reactome: R-HSA-3359475|Reactome: R-HSA-3359478|Reactome: R-HSA-71032 CDA09_17070 6a8ab87d7c5dfc80e36946694903453a 213 Pfam PF00440 Bacterial regulatory proteins, tetR family 30 76 2.9E-15 T 01-11-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 CDA09_17070 6a8ab87d7c5dfc80e36946694903453a 213 ProSitePatterns PS01081 TetR-type HTH domain signature. 42 73 - T 01-11-2018 IPR023772 DNA-binding HTH domain, TetR-type, conserved site CDA09_17070 6a8ab87d7c5dfc80e36946694903453a 213 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 30 43 2.3E-7 T 01-11-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 CDA09_17070 6a8ab87d7c5dfc80e36946694903453a 213 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 51 74 2.3E-7 T 01-11-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 CDA09_17070 6a8ab87d7c5dfc80e36946694903453a 213 Gene3D G3DSA:1.10.357.10 72 212 2.0E-34 T 01-11-2018 CDA09_17070 6a8ab87d7c5dfc80e36946694903453a 213 Gene3D G3DSA:1.10.10.60 5 71 2.5E-16 T 01-11-2018 CDA09_17070 6a8ab87d7c5dfc80e36946694903453a 213 SUPERFAMILY SSF46689 19 88 2.6E-16 T 01-11-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 CDA09_17070 6a8ab87d7c5dfc80e36946694903453a 213 SUPERFAMILY SSF48498 99 211 1.63E-21 T 01-11-2018 IPR036271 Tetracyclin repressor-like, C-terminal domain superfamily CDA09_08625 51dad5f13852fbc389663aa46fe71b5d 450 Gene3D G3DSA:1.20.1250.20 16 442 2.0E-76 T 01-11-2018 CDA09_08625 51dad5f13852fbc389663aa46fe71b5d 450 SUPERFAMILY SSF103473 24 441 1.14E-79 T 01-11-2018 IPR036259 MFS transporter superfamily CDA09_08625 51dad5f13852fbc389663aa46fe71b5d 450 Pfam PF07690 Major Facilitator Superfamily 36 399 7.3E-47 T 01-11-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 CDA09_00490 02940d487690cda13286bfd2ab68b8f2 289 ProSitePatterns PS00153 ATP synthase gamma subunit signature. 275 288 - T 01-11-2018 IPR023632 ATP synthase, F1 complex, gamma subunit conserved site Reactome: R-HSA-163210|Reactome: R-HSA-8949613 CDA09_00490 02940d487690cda13286bfd2ab68b8f2 289 SUPERFAMILY SSF52943 2 289 1.06E-91 T 01-11-2018 IPR035968 ATP synthase, F1 complex, gamma subunit superfamily GO:0015986|GO:0045261|GO:0046933 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 CDA09_00490 02940d487690cda13286bfd2ab68b8f2 289 Gene3D G3DSA:3.40.1380.10 62 208 5.2E-103 T 01-11-2018 CDA09_00490 02940d487690cda13286bfd2ab68b8f2 289 TIGRFAM TIGR01146 ATPsyn_F1gamma: ATP synthase F1, gamma subunit 1 289 1.1E-103 T 01-11-2018 IPR000131 ATP synthase, F1 complex, gamma subunit GO:0015986|GO:0045261|GO:0046933 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 CDA09_00490 02940d487690cda13286bfd2ab68b8f2 289 PRINTS PR00126 ATP synthase gamma subunit signature 75 94 1.8E-36 T 01-11-2018 IPR000131 ATP synthase, F1 complex, gamma subunit GO:0015986|GO:0045261|GO:0046933 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 CDA09_00490 02940d487690cda13286bfd2ab68b8f2 289 PRINTS PR00126 ATP synthase gamma subunit signature 169 186 1.8E-36 T 01-11-2018 IPR000131 ATP synthase, F1 complex, gamma subunit GO:0015986|GO:0045261|GO:0046933 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 CDA09_00490 02940d487690cda13286bfd2ab68b8f2 289 PRINTS PR00126 ATP synthase gamma subunit signature 236 255 1.8E-36 T 01-11-2018 IPR000131 ATP synthase, F1 complex, gamma subunit GO:0015986|GO:0045261|GO:0046933 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 CDA09_00490 02940d487690cda13286bfd2ab68b8f2 289 PRINTS PR00126 ATP synthase gamma subunit signature 267 288 1.8E-36 T 01-11-2018 IPR000131 ATP synthase, F1 complex, gamma subunit GO:0015986|GO:0045261|GO:0046933 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 CDA09_00490 02940d487690cda13286bfd2ab68b8f2 289 Pfam PF00231 ATP synthase 5 288 1.5E-93 T 01-11-2018 IPR000131 ATP synthase, F1 complex, gamma subunit GO:0015986|GO:0045261|GO:0046933 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 CDA09_00490 02940d487690cda13286bfd2ab68b8f2 289 Hamap MF_00815 ATP synthase gamma chain [atpG]. 1 289 35.612 T 01-11-2018 IPR000131 ATP synthase, F1 complex, gamma subunit GO:0015986|GO:0045261|GO:0046933 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 CDA09_00490 02940d487690cda13286bfd2ab68b8f2 289 Gene3D G3DSA:1.10.287.80 6 285 5.2E-103 T 01-11-2018 CDA09_14880 8dfc259cddd9fadbcf909336d24b6013 246 Pfam PF01048 Phosphorylase superfamily 2 242 4.1E-45 T 01-11-2018 IPR000845 Nucleoside phosphorylase domain GO:0003824|GO:0009116 CDA09_14880 8dfc259cddd9fadbcf909336d24b6013 246 Hamap MF_01963 S-methyl-5'-thioadenosine phosphorylase [mtnP]. 1 246 32.035 T 01-11-2018 IPR010044 Methylthioadenosine phosphorylase (MTAP) GO:0017061 Reactome: R-HSA-1237112|Reactome: R-HSA-8950505 CDA09_14880 8dfc259cddd9fadbcf909336d24b6013 246 SUPERFAMILY SSF53167 1 244 4.17E-78 T 01-11-2018 IPR035994 Nucleoside phosphorylase superfamily GO:0003824|GO:0009116 CDA09_14880 8dfc259cddd9fadbcf909336d24b6013 246 Gene3D G3DSA:3.40.50.1580 1 246 2.8E-77 T 01-11-2018 CDA09_14260 2ec6bbe142f126f099d2ee361f89a8f0 141 Gene3D G3DSA:1.20.120.910 11 141 2.3E-39 T 01-11-2018 CDA09_14260 2ec6bbe142f126f099d2ee361f89a8f0 141 PRINTS PR00618 DksA/TraR zinc finger signature 104 115 7.2E-5 T 01-11-2018 IPR020460 Zinc finger, DksA/TraR C4-type, bacteria CDA09_14260 2ec6bbe142f126f099d2ee361f89a8f0 141 PRINTS PR00618 DksA/TraR zinc finger signature 116 128 7.2E-5 T 01-11-2018 IPR020460 Zinc finger, DksA/TraR C4-type, bacteria CDA09_14260 2ec6bbe142f126f099d2ee361f89a8f0 141 SUPERFAMILY SSF57716 101 139 2.71E-10 T 01-11-2018 CDA09_14260 2ec6bbe142f126f099d2ee361f89a8f0 141 Pfam PF01258 Prokaryotic dksA/traR C4-type zinc finger 99 133 3.0E-12 T 01-11-2018 IPR000962 Zinc finger, DksA/TraR C4-type GO:0008270 CDA09_14260 2ec6bbe142f126f099d2ee361f89a8f0 141 ProSitePatterns PS01102 Prokaryotic dksA C4-type zinc finger. 104 128 - T 01-11-2018 IPR020458 Zinc finger, DksA/TraR C4-type conserved site CDA09_14260 2ec6bbe142f126f099d2ee361f89a8f0 141 Hamap MF_00926 RNA polymerase-binding transcription factor DksA [dksA]. 18 140 29.719 T 01-11-2018 IPR012784 RNA polymerase-binding transcription factor DksA GO:0008270 CDA09_14260 2ec6bbe142f126f099d2ee361f89a8f0 141 TIGRFAM TIGR02420 dksA: RNA polymerase-binding protein DksA 22 130 2.0E-49 T 01-11-2018 IPR012784 RNA polymerase-binding transcription factor DksA GO:0008270 CDA09_14260 2ec6bbe142f126f099d2ee361f89a8f0 141 SUPERFAMILY SSF109635 9 100 3.01E-32 T 01-11-2018 IPR037187 DksA, N-terminal domain superfamily CDA09_22920 4a2e22017f7369ea07122c4e271615a5 356 TIGRFAM TIGR01464 hemE: uroporphyrinogen decarboxylase 9 347 3.2E-127 T 01-11-2018 IPR006361 Uroporphyrinogen decarboxylase HemE GO:0004853|GO:0006779 KEGG: 00860+4.1.1.37|MetaCyc: PWY-5531|MetaCyc: PWY-7159|MetaCyc: PWY-7766|Reactome: R-HSA-189451 CDA09_22920 4a2e22017f7369ea07122c4e271615a5 356 Pfam PF01208 Uroporphyrinogen decarboxylase (URO-D) 5 348 8.0E-134 T 01-11-2018 IPR000257 Uroporphyrinogen decarboxylase (URO-D) GO:0004853|GO:0006779 KEGG: 00860+4.1.1.37|MetaCyc: PWY-5531|MetaCyc: PWY-7159|MetaCyc: PWY-7766|Reactome: R-HSA-189451 CDA09_22920 4a2e22017f7369ea07122c4e271615a5 356 Gene3D G3DSA:3.20.20.210 1 356 9.0E-156 T 01-11-2018 IPR038071 UROD/MetE-like superfamily Reactome: R-HSA-189451 CDA09_22920 4a2e22017f7369ea07122c4e271615a5 356 SUPERFAMILY SSF51726 3 351 1.52E-118 T 01-11-2018 IPR038071 UROD/MetE-like superfamily Reactome: R-HSA-189451 CDA09_22920 4a2e22017f7369ea07122c4e271615a5 356 ProSitePatterns PS00907 Uroporphyrinogen decarboxylase signature 2. 142 158 - T 01-11-2018 IPR000257 Uroporphyrinogen decarboxylase (URO-D) GO:0004853|GO:0006779 KEGG: 00860+4.1.1.37|MetaCyc: PWY-5531|MetaCyc: PWY-7159|MetaCyc: PWY-7766|Reactome: R-HSA-189451 CDA09_22920 4a2e22017f7369ea07122c4e271615a5 356 Hamap MF_00218 Uroporphyrinogen decarboxylase [hemE]. 6 349 49.7 T 01-11-2018 IPR006361 Uroporphyrinogen decarboxylase HemE GO:0004853|GO:0006779 KEGG: 00860+4.1.1.37|MetaCyc: PWY-5531|MetaCyc: PWY-7159|MetaCyc: PWY-7766|Reactome: R-HSA-189451 CDA09_22920 4a2e22017f7369ea07122c4e271615a5 356 ProSitePatterns PS00906 Uroporphyrinogen decarboxylase signature 1. 22 31 - T 01-11-2018 IPR000257 Uroporphyrinogen decarboxylase (URO-D) GO:0004853|GO:0006779 KEGG: 00860+4.1.1.37|MetaCyc: PWY-5531|MetaCyc: PWY-7159|MetaCyc: PWY-7766|Reactome: R-HSA-189451 CDA09_08950 5ec0d280b83b65cedcb874157facc181 722 SUPERFAMILY SSF53098 525 703 4.56E-55 T 01-11-2018 IPR012337 Ribonuclease H-like superfamily CDA09_08950 5ec0d280b83b65cedcb874157facc181 722 Gene3D G3DSA:3.30.450.20 129 276 1.0E-6 T 01-11-2018 CDA09_08950 5ec0d280b83b65cedcb874157facc181 722 SMART SM00479 531 699 1.6E-49 T 01-11-2018 IPR013520 Exonuclease, RNase T/DNA polymerase III CDA09_08950 5ec0d280b83b65cedcb874157facc181 722 Gene3D G3DSA:3.30.420.10 527 695 1.4E-50 T 01-11-2018 IPR036397 Ribonuclease H superfamily GO:0003676 CDA09_08950 5ec0d280b83b65cedcb874157facc181 722 TIGRFAM TIGR00573 dnaq: exonuclease, DNA polymerase III, epsilon subunit family 525 694 2.9E-33 T 01-11-2018 IPR006054 DNA polymerase III epsilon subunit, exonuclease domain GO:0003677|GO:0003887|GO:0006260 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 CDA09_08950 5ec0d280b83b65cedcb874157facc181 722 Pfam PF00929 Exonuclease 534 690 3.6E-36 T 01-11-2018 IPR013520 Exonuclease, RNase T/DNA polymerase III CDA09_02300 e15fa3c0687d73ce94053080f5d6ef66 292 Hamap MF_00636 RNase adapter protein RapZ [rapZ]. 1 280 39.933 T 01-11-2018 IPR005337 RapZ-like family GO:0005524 CDA09_02300 e15fa3c0687d73ce94053080f5d6ef66 292 Pfam PF03668 P-loop ATPase protein family 1 280 2.5E-96 T 01-11-2018 IPR005337 RapZ-like family GO:0005524 CDA09_02300 e15fa3c0687d73ce94053080f5d6ef66 292 SUPERFAMILY SSF52540 1 153 3.41E-10 T 01-11-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CDA09_02300 e15fa3c0687d73ce94053080f5d6ef66 292 PIRSF PIRSF005052 1 283 3.9E-107 T 01-11-2018 IPR005337 RapZ-like family GO:0005524 CDA09_21410 93761edc04b97af284087725061a4b08 194 Pfam PF07929 Plasmid pRiA4b ORF-3-like protein 17 183 2.4E-62 T 01-11-2018 IPR012912 Plasmid pRiA4b, Orf3 CDA09_21410 93761edc04b97af284087725061a4b08 194 SUPERFAMILY SSF159941 17 185 1.7E-59 T 01-11-2018 IPR024047 MM3350-like superfamily CDA09_21410 93761edc04b97af284087725061a4b08 194 Gene3D G3DSA:3.10.290.30 12 187 2.6E-61 T 01-11-2018 IPR024047 MM3350-like superfamily CDA09_15725 a1c9e077ea18abdd03d6de922cf760c2 175 SUPERFAMILY SSF55021 88 170 3.67E-14 T 01-11-2018 CDA09_15725 a1c9e077ea18abdd03d6de922cf760c2 175 Gene3D G3DSA:3.30.70.260 84 172 1.3E-25 T 01-11-2018 CDA09_15725 a1c9e077ea18abdd03d6de922cf760c2 175 SUPERFAMILY SSF55021 2 69 9.82E-10 T 01-11-2018 CDA09_15725 a1c9e077ea18abdd03d6de922cf760c2 175 Pfam PF13740 ACT domain 5 70 7.7E-16 T 01-11-2018 CDA09_15725 a1c9e077ea18abdd03d6de922cf760c2 175 Pfam PF01842 ACT domain 91 128 5.4E-8 T 01-11-2018 IPR002912 ACT domain CDA09_15725 a1c9e077ea18abdd03d6de922cf760c2 175 Gene3D G3DSA:3.30.70.260 1 79 4.3E-15 T 01-11-2018 CDA09_15725 a1c9e077ea18abdd03d6de922cf760c2 175 PIRSF PIRSF028103 1 172 1.9E-44 T 01-11-2018 IPR016867 Glycine cleavage system transcriptional repressor GO:0006355 CDA09_22285 acd189db7b7b033a9c2332a045c60e9c 250 Pfam PF13531 Bacterial extracellular solute-binding protein 26 248 3.9E-46 T 01-11-2018 CDA09_22285 acd189db7b7b033a9c2332a045c60e9c 250 SUPERFAMILY SSF53850 24 248 1.89E-61 T 01-11-2018 CDA09_22285 acd189db7b7b033a9c2332a045c60e9c 250 PIRSF PIRSF004846 1 250 3.5E-52 T 01-11-2018 IPR005950 Molybdate ABC transporter, substrate-binding protein GO:0015689 CDA09_22285 acd189db7b7b033a9c2332a045c60e9c 250 TIGRFAM TIGR01256 modA: molybdate ABC transporter, periplasmic molybdate-binding protein 30 247 6.9E-74 T 01-11-2018 IPR005950 Molybdate ABC transporter, substrate-binding protein GO:0015689 CDA09_22285 acd189db7b7b033a9c2332a045c60e9c 250 Gene3D G3DSA:3.40.190.10 29 248 2.4E-81 T 01-11-2018 CDA09_22285 acd189db7b7b033a9c2332a045c60e9c 250 Gene3D G3DSA:3.40.190.10 104 210 2.4E-81 T 01-11-2018 CDA09_14500 b327995b25e8bec8762db95e676faa99 897 Gene3D G3DSA:3.40.50.261 298 465 1.2E-58 T 01-11-2018 IPR016102 Succinyl-CoA synthetase-like KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384 CDA09_14500 b327995b25e8bec8762db95e676faa99 897 SUPERFAMILY SSF52210 134 300 1.31E-44 T 01-11-2018 IPR016102 Succinyl-CoA synthetase-like KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384 CDA09_14500 b327995b25e8bec8762db95e676faa99 897 Gene3D G3DSA:3.40.50.720 5 134 5.2E-43 T 01-11-2018 CDA09_14500 b327995b25e8bec8762db95e676faa99 897 Gene3D G3DSA:3.30.1490.20 509 586 2.5E-74 T 01-11-2018 IPR013815 ATP-grasp fold, subdomain 1 GO:0005524 CDA09_14500 b327995b25e8bec8762db95e676faa99 897 Gene3D G3DSA:3.40.50.261 135 294 9.1E-56 T 01-11-2018 IPR016102 Succinyl-CoA synthetase-like KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384 CDA09_14500 b327995b25e8bec8762db95e676faa99 897 Pfam PF13302 Acetyltransferase (GNAT) domain 738 877 2.8E-6 T 01-11-2018 IPR000182 GNAT domain CDA09_14500 b327995b25e8bec8762db95e676faa99 897 SMART SM00881 10 105 5.4E-34 T 01-11-2018 IPR003781 CoA-binding GO:0048037 CDA09_14500 b327995b25e8bec8762db95e676faa99 897 SUPERFAMILY SSF52210 299 456 2.88E-48 T 01-11-2018 IPR016102 Succinyl-CoA synthetase-like KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384 CDA09_14500 b327995b25e8bec8762db95e676faa99 897 Pfam PF13380 CoA binding domain 14 139 9.5E-23 T 01-11-2018 IPR003781 CoA-binding GO:0048037 CDA09_14500 b327995b25e8bec8762db95e676faa99 897 Gene3D G3DSA:3.40.630.30 721 892 4.1E-40 T 01-11-2018 CDA09_14500 b327995b25e8bec8762db95e676faa99 897 SUPERFAMILY SSF51735 4 144 1.1E-36 T 01-11-2018 IPR036291 NAD(P)-binding domain superfamily CDA09_14500 b327995b25e8bec8762db95e676faa99 897 SUPERFAMILY SSF55729 735 884 3.24E-20 T 01-11-2018 IPR016181 Acyl-CoA N-acyltransferase CDA09_14500 b327995b25e8bec8762db95e676faa99 897 Gene3D G3DSA:3.30.470.20 491 702 2.5E-74 T 01-11-2018 CDA09_14500 b327995b25e8bec8762db95e676faa99 897 Pfam PF13607 Succinyl-CoA ligase like flavodoxin domain 156 293 3.6E-53 T 01-11-2018 IPR032875 Succinyl-CoA synthetase-like, flavodoxin domain CDA09_14500 b327995b25e8bec8762db95e676faa99 897 SUPERFAMILY SSF56059 489 705 6.65E-41 T 01-11-2018 CDA09_14500 b327995b25e8bec8762db95e676faa99 897 Pfam PF13549 ATP-grasp domain 483 704 3.4E-81 T 01-11-2018 CDA09_12550 8b8859500cfcca8f833c28d2bea0c1af 784 SUPERFAMILY SSF56281 521 761 2.1E-42 T 01-11-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like CDA09_12550 8b8859500cfcca8f833c28d2bea0c1af 784 SMART SM00849 533 728 4.1E-5 T 01-11-2018 IPR001279 Metallo-beta-lactamase CDA09_12550 8b8859500cfcca8f833c28d2bea0c1af 784 Pfam PF00753 Metallo-beta-lactamase superfamily 531 722 5.5E-9 T 01-11-2018 IPR001279 Metallo-beta-lactamase CDA09_12550 8b8859500cfcca8f833c28d2bea0c1af 784 TIGRFAM TIGR00361 ComEC_Rec2: DNA internalization-related competence protein ComEC/Rec2 143 757 2.3E-115 T 01-11-2018 IPR004797 Competence protein ComEC/Rec2 GO:0016021|GO:0030420 CDA09_12550 8b8859500cfcca8f833c28d2bea0c1af 784 Pfam PF03772 Competence protein 233 496 1.1E-61 T 01-11-2018 IPR004477 ComEC/Rec2-related protein CDA09_12550 8b8859500cfcca8f833c28d2bea0c1af 784 Gene3D G3DSA:3.60.15.10 523 770 2.0E-52 T 01-11-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like CDA09_12550 8b8859500cfcca8f833c28d2bea0c1af 784 TIGRFAM TIGR00360 ComEC_N-term: ComEC/Rec2-related protein 254 433 8.3E-29 T 01-11-2018 IPR004477 ComEC/Rec2-related protein CDA09_12550 8b8859500cfcca8f833c28d2bea0c1af 784 Pfam PF13567 Domain of unknown function (DUF4131) 27 188 1.4E-29 T 01-11-2018 IPR025405 Domain of unknown function DUF4131 CDA09_18490 a60c1743ce39707467cae822dfb2e9a3 107 Pfam PF00581 Rhodanese-like domain 7 98 8.2E-16 T 01-11-2018 IPR001763 Rhodanese-like domain CDA09_18490 a60c1743ce39707467cae822dfb2e9a3 107 SUPERFAMILY SSF52821 2 105 1.44E-30 T 01-11-2018 IPR036873 Rhodanese-like domain superfamily CDA09_18490 a60c1743ce39707467cae822dfb2e9a3 107 Gene3D G3DSA:3.40.250.10 4 106 4.7E-25 T 01-11-2018 IPR036873 Rhodanese-like domain superfamily CDA09_18490 a60c1743ce39707467cae822dfb2e9a3 107 SMART SM00450 5 102 1.1E-23 T 01-11-2018 IPR001763 Rhodanese-like domain CDA09_07435 3b44e3b9b8cd562cfdbc0c622e403fe0 248 SUPERFAMILY SSF51735 5 245 4.72E-87 T 01-11-2018 IPR036291 NAD(P)-binding domain superfamily CDA09_07435 3b44e3b9b8cd562cfdbc0c622e403fe0 248 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 153 172 1.3E-14 T 01-11-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CDA09_07435 3b44e3b9b8cd562cfdbc0c622e403fe0 248 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 134 142 1.3E-14 T 01-11-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CDA09_07435 3b44e3b9b8cd562cfdbc0c622e403fe0 248 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 81 92 1.3E-14 T 01-11-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CDA09_07435 3b44e3b9b8cd562cfdbc0c622e403fe0 248 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 140 168 - T 01-11-2018 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 CDA09_07435 3b44e3b9b8cd562cfdbc0c622e403fe0 248 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 7 24 5.4E-45 T 01-11-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CDA09_07435 3b44e3b9b8cd562cfdbc0c622e403fe0 248 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 174 191 5.4E-45 T 01-11-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CDA09_07435 3b44e3b9b8cd562cfdbc0c622e403fe0 248 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 207 227 5.4E-45 T 01-11-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CDA09_07435 3b44e3b9b8cd562cfdbc0c622e403fe0 248 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 81 92 5.4E-45 T 01-11-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CDA09_07435 3b44e3b9b8cd562cfdbc0c622e403fe0 248 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 128 144 5.4E-45 T 01-11-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CDA09_07435 3b44e3b9b8cd562cfdbc0c622e403fe0 248 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 153 172 5.4E-45 T 01-11-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CDA09_07435 3b44e3b9b8cd562cfdbc0c622e403fe0 248 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 12 242 5.9E-67 T 01-11-2018 CDA09_07435 3b44e3b9b8cd562cfdbc0c622e403fe0 248 SMART SM00822 This enzymatic domain is part of bacterial polyketide synthases and catalyses the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain. It uses NADPH to reduce the keto group to a hydroxy group. 6 184 0.0048 T 01-11-2018 CDA09_07435 3b44e3b9b8cd562cfdbc0c622e403fe0 248 Gene3D G3DSA:3.40.50.720 2 246 6.3E-86 T 01-11-2018 CDA09_01915 5ae35ad1ef28a2d7baf1584461c0f956 258 Pfam PF00970 Oxidoreductase FAD-binding domain 15 97 5.9E-9 T 01-11-2018 IPR008333 Flavoprotein pyridine nucleotide cytochrome reductase-like, FAD-binding domain Reactome: R-HSA-1237044 CDA09_01915 5ae35ad1ef28a2d7baf1584461c0f956 258 Gene3D G3DSA:3.40.50.80 100 254 3.8E-41 T 01-11-2018 IPR039261 Ferredoxin-NADP reductase (FNR), nucleotide-binding domain CDA09_01915 5ae35ad1ef28a2d7baf1584461c0f956 258 SUPERFAMILY SSF63380 4 99 7.53E-26 T 01-11-2018 IPR017938 Riboflavin synthase-like beta-barrel CDA09_01915 5ae35ad1ef28a2d7baf1584461c0f956 258 PRINTS PR00371 Flavoprotein pyridine nucleotide cytochrome reductase signature 51 58 7.9E-6 T 01-11-2018 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase GO:0016491|GO:0055114 CDA09_01915 5ae35ad1ef28a2d7baf1584461c0f956 258 PRINTS PR00371 Flavoprotein pyridine nucleotide cytochrome reductase signature 111 130 7.9E-6 T 01-11-2018 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase GO:0016491|GO:0055114 CDA09_01915 5ae35ad1ef28a2d7baf1584461c0f956 258 PRINTS PR00371 Flavoprotein pyridine nucleotide cytochrome reductase signature 136 145 7.9E-6 T 01-11-2018 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase GO:0016491|GO:0055114 CDA09_01915 5ae35ad1ef28a2d7baf1584461c0f956 258 PRINTS PR00371 Flavoprotein pyridine nucleotide cytochrome reductase signature 215 223 7.9E-6 T 01-11-2018 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase GO:0016491|GO:0055114 CDA09_01915 5ae35ad1ef28a2d7baf1584461c0f956 258 SUPERFAMILY SSF52343 103 256 1.83E-40 T 01-11-2018 IPR039261 Ferredoxin-NADP reductase (FNR), nucleotide-binding domain CDA09_01915 5ae35ad1ef28a2d7baf1584461c0f956 258 Pfam PF00175 Oxidoreductase NAD-binding domain 114 228 4.4E-7 T 01-11-2018 IPR001433 Oxidoreductase FAD/NAD(P)-binding GO:0016491|GO:0055114 CDA09_01915 5ae35ad1ef28a2d7baf1584461c0f956 258 Gene3D G3DSA:2.40.30.10 1 97 2.4E-29 T 01-11-2018 CDA09_15475 708d7e8201bc2177a4a5a9568fb71309 446 Pfam PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain 209 353 2.7E-18 T 01-11-2018 IPR011766 Thiamine pyrophosphate enzyme, C-terminal TPP-binding GO:0003824|GO:0030976 CDA09_15475 708d7e8201bc2177a4a5a9568fb71309 446 SUPERFAMILY SSF52518 144 440 1.65E-64 T 01-11-2018 IPR029061 Thiamin diphosphate-binding fold CDA09_15475 708d7e8201bc2177a4a5a9568fb71309 446 Gene3D G3DSA:3.40.50.970 203 445 1.0E-57 T 01-11-2018 CDA09_15475 708d7e8201bc2177a4a5a9568fb71309 446 Gene3D G3DSA:3.30.70.20 8 143 3.6E-22 T 01-11-2018 CDA09_15475 708d7e8201bc2177a4a5a9568fb71309 446 SUPERFAMILY SSF54862 7 154 4.27E-35 T 01-11-2018 CDA09_15475 708d7e8201bc2177a4a5a9568fb71309 446 Pfam PF12837 4Fe-4S binding domain 8 25 1.8E-6 T 01-11-2018 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain CDA09_15475 708d7e8201bc2177a4a5a9568fb71309 446 Gene3D G3DSA:3.30.70.20 64 117 3.6E-22 T 01-11-2018 CDA09_15475 708d7e8201bc2177a4a5a9568fb71309 446 Pfam PF13247 4Fe-4S dicluster domain 56 138 1.8E-10 T 01-11-2018 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain CDA09_03135 22c82bd9fec0cb0c059bf1a429c84290 393 SUPERFAMILY SSF53187 2 391 5.59E-80 T 01-11-2018 CDA09_03135 22c82bd9fec0cb0c059bf1a429c84290 393 SUPERFAMILY SSF55031 181 294 5.63E-31 T 01-11-2018 IPR036264 Bacterial exopeptidase dimerisation domain CDA09_03135 22c82bd9fec0cb0c059bf1a429c84290 393 Pfam PF07687 Peptidase dimerisation domain 186 280 7.5E-8 T 01-11-2018 IPR011650 Peptidase M20, dimerisation domain CDA09_03135 22c82bd9fec0cb0c059bf1a429c84290 393 Gene3D G3DSA:3.40.630.10 3 376 4.1E-130 T 01-11-2018 CDA09_03135 22c82bd9fec0cb0c059bf1a429c84290 393 Pfam PF01546 Peptidase family M20/M25/M40 64 388 3.0E-40 T 01-11-2018 IPR002933 Peptidase M20 GO:0016787 CDA09_03135 22c82bd9fec0cb0c059bf1a429c84290 393 TIGRFAM TIGR01891 amidohydrolases: amidohydrolase 2 376 1.5E-102 T 01-11-2018 IPR017439 Amidohydrolase GO:0016787 CDA09_03135 22c82bd9fec0cb0c059bf1a429c84290 393 Gene3D G3DSA:3.30.70.360 179 293 4.1E-130 T 01-11-2018 CDA09_03135 22c82bd9fec0cb0c059bf1a429c84290 393 PIRSF PIRSF005962 1 392 4.6E-117 T 01-11-2018 IPR017439 Amidohydrolase GO:0016787 CDA09_02810 5abe5ee8c141735aab057644753c9db0 1362 Pfam PF11898 Domain of unknown function (DUF3418) 738 1358 5.7E-194 T 01-11-2018 IPR024590 RNA helicase HrpA, C-terminal CDA09_02810 5abe5ee8c141735aab057644753c9db0 1362 Gene3D G3DSA:1.20.120.1080 468 565 1.7E-15 T 01-11-2018 CDA09_02810 5abe5ee8c141735aab057644753c9db0 1362 SMART SM00487 76 265 1.5E-22 T 01-11-2018 IPR014001 Helicase superfamily 1/2, ATP-binding domain CDA09_02810 5abe5ee8c141735aab057644753c9db0 1362 SMART SM00382 93 389 8.0E-4 T 01-11-2018 IPR003593 AAA+ ATPase domain CDA09_02810 5abe5ee8c141735aab057644753c9db0 1362 Pfam PF00271 Helicase conserved C-terminal domain 296 422 1.8E-10 T 01-11-2018 IPR001650 Helicase, C-terminal CDA09_02810 5abe5ee8c141735aab057644753c9db0 1362 Gene3D G3DSA:3.40.50.300 32 258 1.0E-72 T 01-11-2018 CDA09_02810 5abe5ee8c141735aab057644753c9db0 1362 Pfam PF04408 Helicase associated domain (HA2) 486 565 1.4E-14 T 01-11-2018 IPR007502 Helicase-associated domain GO:0004386 CDA09_02810 5abe5ee8c141735aab057644753c9db0 1362 SMART SM00490 322 423 3.3E-12 T 01-11-2018 IPR001650 Helicase, C-terminal CDA09_02810 5abe5ee8c141735aab057644753c9db0 1362 TIGRFAM TIGR01967 DEAH_box_HrpA: RNA helicase HrpA 18 1041 0.0 T 01-11-2018 IPR010222 RNA helicase HrpA GO:0004004 CDA09_02810 5abe5ee8c141735aab057644753c9db0 1362 SMART SM00847 483 579 7.3E-31 T 01-11-2018 IPR007502 Helicase-associated domain GO:0004386 CDA09_02810 5abe5ee8c141735aab057644753c9db0 1362 SUPERFAMILY SSF52540 75 625 1.05E-88 T 01-11-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CDA09_02810 5abe5ee8c141735aab057644753c9db0 1362 Pfam PF07717 Oligonucleotide/oligosaccharide-binding (OB)-fold 642 723 3.9E-13 T 01-11-2018 IPR011709 Domain of unknown function DUF1605 CDA09_02810 5abe5ee8c141735aab057644753c9db0 1362 Gene3D G3DSA:3.40.50.300 260 439 1.1E-53 T 01-11-2018 CDA09_02810 5abe5ee8c141735aab057644753c9db0 1362 Pfam PF00270 DEAD/DEAH box helicase 85 235 3.2E-6 T 01-11-2018 IPR011545 DEAD/DEAH box helicase domain GO:0003676|GO:0005524 CDA09_21260 56f992d1f92ba0496e2ec1adda2d6cb0 643 SUPERFAMILY SSF52540 297 524 5.33E-45 T 01-11-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CDA09_21260 56f992d1f92ba0496e2ec1adda2d6cb0 643 Gene3D G3DSA:3.40.50.300 3 274 1.7E-56 T 01-11-2018 CDA09_21260 56f992d1f92ba0496e2ec1adda2d6cb0 643 ProSitePatterns PS00211 ABC transporters family signature. 438 452 - T 01-11-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 CDA09_21260 56f992d1f92ba0496e2ec1adda2d6cb0 643 Pfam PF00005 ABC transporter 328 466 9.1E-22 T 01-11-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 CDA09_21260 56f992d1f92ba0496e2ec1adda2d6cb0 643 SUPERFAMILY SSF52540 1 255 2.96E-42 T 01-11-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CDA09_21260 56f992d1f92ba0496e2ec1adda2d6cb0 643 Pfam PF12848 ABC transporter 218 296 1.2E-28 T 01-11-2018 IPR032781 ABC-transporter extension domain CDA09_21260 56f992d1f92ba0496e2ec1adda2d6cb0 643 Gene3D G3DSA:3.40.50.300 275 547 5.2E-56 T 01-11-2018 CDA09_21260 56f992d1f92ba0496e2ec1adda2d6cb0 643 Pfam PF00005 ABC transporter 18 178 2.8E-21 T 01-11-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 CDA09_21260 56f992d1f92ba0496e2ec1adda2d6cb0 643 ProSitePatterns PS00211 ABC transporters family signature. 150 164 - T 01-11-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 CDA09_21260 56f992d1f92ba0496e2ec1adda2d6cb0 643 Pfam PF16326 ABC transporter C-terminal domain 572 635 1.5E-9 T 01-11-2018 IPR032524 ABC transporter Uup, C-terminal GO:0003677 CDA09_21260 56f992d1f92ba0496e2ec1adda2d6cb0 643 SMART SM00382 26 223 3.5E-5 T 01-11-2018 IPR003593 AAA+ ATPase domain CDA09_21260 56f992d1f92ba0496e2ec1adda2d6cb0 643 SMART SM00382 337 510 6.2E-12 T 01-11-2018 IPR003593 AAA+ ATPase domain CDA09_21050 a95a1b1709a042adfdd00a0aa13756c1 197 Pfam PF08798 CRISPR associated protein 1 195 3.8E-43 T 01-11-2018 IPR010179 CRISPR-associated protein Cse3 CDA09_21050 a95a1b1709a042adfdd00a0aa13756c1 197 SUPERFAMILY SSF117987 81 195 5.75E-23 T 01-11-2018 CDA09_21050 a95a1b1709a042adfdd00a0aa13756c1 197 SUPERFAMILY SSF117987 1 61 2.62E-14 T 01-11-2018 CDA09_21050 a95a1b1709a042adfdd00a0aa13756c1 197 Gene3D G3DSA:3.30.70.1210 80 195 1.3E-30 T 01-11-2018 CDA09_21050 a95a1b1709a042adfdd00a0aa13756c1 197 SMART SM01101 1 195 3.7E-55 T 01-11-2018 IPR010179 CRISPR-associated protein Cse3 CDA09_21050 a95a1b1709a042adfdd00a0aa13756c1 197 Gene3D G3DSA:3.30.70.1200 1 75 2.2E-25 T 01-11-2018 CDA09_21050 a95a1b1709a042adfdd00a0aa13756c1 197 TIGRFAM TIGR01907 casE_Cse3: CRISPR-associated protein Cas6/Cse3/CasE, subtype I-E/ECOLI 1 195 1.9E-35 T 01-11-2018 IPR010179 CRISPR-associated protein Cse3 CDA09_17230 49ac9e07b0885d6a4a7e30ff23fa5374 226 SUPERFAMILY SSF53328 4 197 1.96E-63 T 01-11-2018 IPR036477 Formyl transferase, N-terminal domain superfamily GO:0009058|GO:0016742 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 CDA09_17230 49ac9e07b0885d6a4a7e30ff23fa5374 226 Gene3D G3DSA:3.40.50.170 1 204 2.0E-76 T 01-11-2018 CDA09_17230 49ac9e07b0885d6a4a7e30ff23fa5374 226 TIGRFAM TIGR00639 PurN: phosphoribosylglycinamide formyltransferase 3 189 2.7E-71 T 01-11-2018 IPR004607 Phosphoribosylglycinamide formyltransferase GO:0004644|GO:0006189 KEGG: 00230+2.1.2.2|KEGG: 00670+2.1.2.2|MetaCyc: PWY-6121|MetaCyc: PWY-6613|Reactome: R-HSA-73817 CDA09_17230 49ac9e07b0885d6a4a7e30ff23fa5374 226 Pfam PF00551 Formyl transferase 3 179 6.5E-55 T 01-11-2018 IPR002376 Formyl transferase, N-terminal GO:0009058|GO:0016742 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 CDA09_17230 49ac9e07b0885d6a4a7e30ff23fa5374 226 Hamap MF_01930 Phosphoribosylglycinamide formyltransferase [purN]. 3 185 31.708 T 01-11-2018 IPR004607 Phosphoribosylglycinamide formyltransferase GO:0004644|GO:0006189 KEGG: 00230+2.1.2.2|KEGG: 00670+2.1.2.2|MetaCyc: PWY-6121|MetaCyc: PWY-6613|Reactome: R-HSA-73817 CDA09_12925 f1c9cd865a1e561610a4174706c21247 220 SMART SM00867 55 218 3.5E-61 T 01-11-2018 IPR007372 Lipid/polyisoprenoid-binding, YceI-like CDA09_12925 f1c9cd865a1e561610a4174706c21247 220 SUPERFAMILY SSF101874 54 220 7.85E-52 T 01-11-2018 IPR036761 Lipid/polyisoprenoid-binding, YceI-like superfamily CDA09_12925 f1c9cd865a1e561610a4174706c21247 220 Gene3D G3DSA:2.40.128.110 54 220 4.3E-49 T 01-11-2018 IPR036761 Lipid/polyisoprenoid-binding, YceI-like superfamily CDA09_12925 f1c9cd865a1e561610a4174706c21247 220 Pfam PF04264 YceI-like domain 56 216 9.0E-42 T 01-11-2018 IPR007372 Lipid/polyisoprenoid-binding, YceI-like CDA09_20240 54b22d843a06b1e9e7df5423b696f190 202 Gene3D G3DSA:3.40.50.10610 28 202 1.8E-39 T 01-11-2018 CDA09_20240 54b22d843a06b1e9e7df5423b696f190 202 Pfam PF03886 ABC-type transport auxiliary lipoprotein component 38 194 1.3E-14 T 01-11-2018 IPR005586 ABC-type transport auxiliary lipoprotein component CDA09_20240 54b22d843a06b1e9e7df5423b696f190 202 SUPERFAMILY SSF159594 36 200 4.18E-34 T 01-11-2018 CDA09_19390 23b2dfa848072512a40785e931638f70 136 Hamap MF_01368 50S ribosomal protein L17 [rplQ]. 5 116 26.806 T 01-11-2018 IPR000456 Ribosomal protein L17 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 CDA09_19390 23b2dfa848072512a40785e931638f70 136 TIGRFAM TIGR00059 L17: ribosomal protein bL17 7 117 5.9E-44 T 01-11-2018 IPR000456 Ribosomal protein L17 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 CDA09_19390 23b2dfa848072512a40785e931638f70 136 ProSitePatterns PS01167 Ribosomal protein L17 signature. 34 56 - T 01-11-2018 IPR000456 Ribosomal protein L17 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 CDA09_19390 23b2dfa848072512a40785e931638f70 136 Pfam PF01196 Ribosomal protein L17 20 115 2.5E-33 T 01-11-2018 IPR000456 Ribosomal protein L17 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 CDA09_19390 23b2dfa848072512a40785e931638f70 136 Gene3D G3DSA:3.90.1030.10 1 116 4.1E-46 T 01-11-2018 IPR036373 Ribosomal protein L17 superfamily GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 CDA09_19390 23b2dfa848072512a40785e931638f70 136 SUPERFAMILY SSF64263 1 118 1.44E-48 T 01-11-2018 IPR036373 Ribosomal protein L17 superfamily GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 CDA09_03335 3432d4175c264aec6c2e8a9fd3a5082e 453 Gene3D G3DSA:3.40.630.40 206 447 1.4E-80 T 01-11-2018 CDA09_03335 3432d4175c264aec6c2e8a9fd3a5082e 453 SUPERFAMILY SSF53187 219 438 2.01E-55 T 01-11-2018 CDA09_03335 3432d4175c264aec6c2e8a9fd3a5082e 453 Gene3D G3DSA:2.60.40.3500 42 157 6.5E-28 T 01-11-2018 CDA09_03335 3432d4175c264aec6c2e8a9fd3a5082e 453 Pfam PF01520 N-acetylmuramoyl-L-alanine amidase 220 435 2.6E-48 T 01-11-2018 IPR002508 N-acetylmuramoyl-L-alanine amidase, catalytic domain GO:0008745|GO:0009253 CDA09_03335 3432d4175c264aec6c2e8a9fd3a5082e 453 Pfam PF11741 AMIN domain 51 154 6.6E-21 T 01-11-2018 IPR021731 AMIN domain CDA09_03335 3432d4175c264aec6c2e8a9fd3a5082e 453 SMART SM00646 280 435 4.8E-62 T 01-11-2018 IPR002508 N-acetylmuramoyl-L-alanine amidase, catalytic domain GO:0008745|GO:0009253 CDA09_20790 33a99322904e248fd08b9eade5d4f79e 251 SMART SM00382 31 240 5.0E-4 T 01-11-2018 IPR003593 AAA+ ATPase domain CDA09_20790 33a99322904e248fd08b9eade5d4f79e 251 SUPERFAMILY SSF52540 5 247 3.66E-58 T 01-11-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CDA09_20790 33a99322904e248fd08b9eade5d4f79e 251 Gene3D G3DSA:3.40.50.300 2 248 1.3E-54 T 01-11-2018 CDA09_20790 33a99322904e248fd08b9eade5d4f79e 251 Pfam PF12399 Branched-chain amino acid ATP-binding cassette transporter 226 247 2.0E-7 T 01-11-2018 IPR032823 Branched-chain amino acid ATP-binding cassette transporter, C-terminal CDA09_20790 33a99322904e248fd08b9eade5d4f79e 251 Pfam PF00005 ABC transporter 23 178 4.2E-28 T 01-11-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 CDA09_20480 e36d23dadb5771eeb3c85936a225a98a 464 Gene3D G3DSA:3.30.565.10 310 455 1.9E-32 T 01-11-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily CDA09_20480 e36d23dadb5771eeb3c85936a225a98a 464 Pfam PF08521 Two-component sensor kinase N-terminal 22 161 4.7E-27 T 01-11-2018 IPR013727 Two-component sensor kinase, N-terminal CDA09_20480 e36d23dadb5771eeb3c85936a225a98a 464 SUPERFAMILY SSF55874 293 454 9.3E-34 T 01-11-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily CDA09_20480 e36d23dadb5771eeb3c85936a225a98a 464 SUPERFAMILY SSF47384 222 301 9.81E-15 T 01-11-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 CDA09_20480 e36d23dadb5771eeb3c85936a225a98a 464 PRINTS PR00344 Bacterial sensor protein C-terminal signature 385 399 4.4E-9 T 01-11-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 CDA09_20480 e36d23dadb5771eeb3c85936a225a98a 464 PRINTS PR00344 Bacterial sensor protein C-terminal signature 403 413 4.4E-9 T 01-11-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 CDA09_20480 e36d23dadb5771eeb3c85936a225a98a 464 PRINTS PR00344 Bacterial sensor protein C-terminal signature 417 435 4.4E-9 T 01-11-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 CDA09_20480 e36d23dadb5771eeb3c85936a225a98a 464 SMART SM00388 238 303 3.9E-12 T 01-11-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 CDA09_20480 e36d23dadb5771eeb3c85936a225a98a 464 Gene3D G3DSA:1.10.287.130 184 303 5.8E-17 T 01-11-2018 CDA09_20480 e36d23dadb5771eeb3c85936a225a98a 464 SMART SM00387 350 457 1.8E-32 T 01-11-2018 IPR003594 Histidine kinase/HSP90-like ATPase CDA09_20480 e36d23dadb5771eeb3c85936a225a98a 464 Pfam PF00512 His Kinase A (phospho-acceptor) domain 240 302 8.5E-11 T 01-11-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 CDA09_20480 e36d23dadb5771eeb3c85936a225a98a 464 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 353 454 3.4E-17 T 01-11-2018 IPR003594 Histidine kinase/HSP90-like ATPase CDA09_02275 f3a6f9bc7809661c0e3c71300f27f025 263 ProSitePatterns PS00166 Enoyl-CoA hydratase/isomerase signature. 103 123 - T 01-11-2018 IPR018376 Enoyl-CoA hydratase/isomerase, conserved site GO:0003824 CDA09_02275 f3a6f9bc7809661c0e3c71300f27f025 263 Gene3D G3DSA:1.10.12.10 204 263 1.1E-18 T 01-11-2018 IPR014748 Enoyl-CoA hydratase, C-terminal CDA09_02275 f3a6f9bc7809661c0e3c71300f27f025 263 Gene3D G3DSA:3.90.226.10 1 202 5.9E-62 T 01-11-2018 CDA09_02275 f3a6f9bc7809661c0e3c71300f27f025 263 SUPERFAMILY SSF52096 3 259 4.07E-74 T 01-11-2018 IPR029045 ClpP/crotonase-like domain superfamily CDA09_02275 f3a6f9bc7809661c0e3c71300f27f025 263 Pfam PF00378 Enoyl-CoA hydratase/isomerase 11 259 4.8E-54 T 01-11-2018 IPR001753 Enoyl-CoA hydratase/isomerase GO:0003824 CDA09_11315 751baa8d7e65418f96d40037879d6a9a 338 SUPERFAMILY SSF56199 14 332 4.58E-114 T 01-11-2018 CDA09_11315 751baa8d7e65418f96d40037879d6a9a 338 Pfam PF02289 Cyclohydrolase (MCH) 14 332 1.2E-123 T 01-11-2018 IPR003209 Methenyltetrahydromethanopterin cyclohydrolase GO:0006730|GO:0018759 KEGG: 00680+3.5.4.27|MetaCyc: PWY-1723|MetaCyc: PWY-7784 CDA09_11315 751baa8d7e65418f96d40037879d6a9a 338 Hamap MF_00486 Methenyltetrahydromethanopterin cyclohydrolase [mch]. 1 338 137.182 T 01-11-2018 IPR003209 Methenyltetrahydromethanopterin cyclohydrolase GO:0006730|GO:0018759 KEGG: 00680+3.5.4.27|MetaCyc: PWY-1723|MetaCyc: PWY-7784 CDA09_11315 751baa8d7e65418f96d40037879d6a9a 338 Gene3D G3DSA:3.10.340.11 14 189 9.6E-111 T 01-11-2018 CDA09_11315 751baa8d7e65418f96d40037879d6a9a 338 TIGRFAM TIGR03120 one_C_mch: methenyltetrahydromethanopterin cyclohydrolase 14 332 2.9E-110 T 01-11-2018 IPR003209 Methenyltetrahydromethanopterin cyclohydrolase GO:0006730|GO:0018759 KEGG: 00680+3.5.4.27|MetaCyc: PWY-1723|MetaCyc: PWY-7784 CDA09_11315 751baa8d7e65418f96d40037879d6a9a 338 Gene3D G3DSA:3.30.1030.10 56 332 9.6E-111 T 01-11-2018 CDA09_02070 4ad55dce07e7fc5fafb4cfa4c9c2505a 367 SUPERFAMILY SSF53850 154 348 1.09E-11 T 01-11-2018 CDA09_02070 4ad55dce07e7fc5fafb4cfa4c9c2505a 367 SUPERFAMILY SSF46785 21 110 6.89E-15 T 01-11-2018 IPR036390 Winged helix DNA-binding domain superfamily CDA09_02070 4ad55dce07e7fc5fafb4cfa4c9c2505a 367 Pfam PF12727 PBP superfamily domain 148 333 1.5E-53 T 01-11-2018 IPR024370 PBP domain CDA09_02070 4ad55dce07e7fc5fafb4cfa4c9c2505a 367 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 31 86 9.7E-9 T 01-11-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 CDA09_02070 4ad55dce07e7fc5fafb4cfa4c9c2505a 367 Gene3D G3DSA:1.10.10.10 17 114 2.4E-15 T 01-11-2018 IPR036388 Winged helix-like DNA-binding domain superfamily CDA09_21745 c0728541a3dbed501eea3fa86d1bf218 437 Pfam PF13336 Acetyl-CoA hydrolase/transferase C-terminal domain 275 425 6.9E-47 T 01-11-2018 IPR026888 Acetyl-CoA hydrolase/transferase C-terminal domain CDA09_21745 c0728541a3dbed501eea3fa86d1bf218 437 Gene3D G3DSA:3.40.1080.10 11 182 6.5E-44 T 01-11-2018 CDA09_21745 c0728541a3dbed501eea3fa86d1bf218 437 SUPERFAMILY SSF100950 193 426 8.37E-54 T 01-11-2018 IPR037171 NagB/RpiA transferase-like CDA09_21745 c0728541a3dbed501eea3fa86d1bf218 437 SUPERFAMILY SSF100950 15 224 1.26E-21 T 01-11-2018 IPR037171 NagB/RpiA transferase-like CDA09_21745 c0728541a3dbed501eea3fa86d1bf218 437 Pfam PF02550 Acetyl-CoA hydrolase/transferase N-terminal domain 29 180 4.8E-12 T 01-11-2018 IPR003702 Acetyl-CoA hydrolase/transferase GO:0003824|GO:0006084 CDA09_21745 c0728541a3dbed501eea3fa86d1bf218 437 Gene3D G3DSA:3.40.1080.20 293 436 1.7E-44 T 01-11-2018 IPR038460 Acetyl-CoA hydrolase/transferase, C-terminal domain superfamily CDA09_21745 c0728541a3dbed501eea3fa86d1bf218 437 Gene3D G3DSA:3.30.750.70 189 292 1.4E-32 T 01-11-2018 CDA09_09860 db57106d0906e05d2ffc4b5872f8f1d6 289 Gene3D G3DSA:3.20.20.30 2 289 7.4E-59 T 01-11-2018 IPR036661 Luciferase-like domain superfamily GO:0016705|GO:0055114 CDA09_09860 db57106d0906e05d2ffc4b5872f8f1d6 289 TIGRFAM TIGR03619 F420_Rv2161c: probable F420-dependent oxidoreductase, Rv2161c family 17 255 4.0E-57 T 01-11-2018 IPR019921 Luciferase-like, F420-dependent oxidoreductase, Rv2161c, predicted CDA09_09860 db57106d0906e05d2ffc4b5872f8f1d6 289 SUPERFAMILY SSF51679 10 285 3.79E-52 T 01-11-2018 IPR036661 Luciferase-like domain superfamily GO:0016705|GO:0055114 CDA09_09860 db57106d0906e05d2ffc4b5872f8f1d6 289 Pfam PF00296 Luciferase-like monooxygenase 11 231 6.2E-40 T 01-11-2018 IPR011251 Luciferase-like domain GO:0016705|GO:0055114 CDA09_04390 503f584b7cccb81baa0d0c36687669e0 212 Gene3D G3DSA:1.20.58.220 12 212 3.4E-55 T 01-11-2018 IPR038078 PhoU-like domain superfamily CDA09_04390 503f584b7cccb81baa0d0c36687669e0 212 Pfam PF01865 Protein of unknown function DUF47 16 209 2.6E-23 T 01-11-2018 IPR018445 Putative phosphate transport regulator CDA09_00840 fc28ee76fdc0e675f717ca0f54fb7f06 367 ProSitePatterns PS01230 RNA methyltransferase trmA family signature 1. 296 325 - T 01-11-2018 IPR030390 RNA methyltransferase TrmA, active site CDA09_00840 fc28ee76fdc0e675f717ca0f54fb7f06 367 TIGRFAM TIGR02143 trmA_only: tRNA (uracil(54)-C(5))-methyltransferase 11 363 1.8E-148 T 01-11-2018 IPR011869 tRNA/tmRNA (uracil-C(5))-methyltransferase, TrmA GO:0006396|GO:0030697 CDA09_00840 fc28ee76fdc0e675f717ca0f54fb7f06 367 Gene3D G3DSA:3.40.50.150 13 358 7.2E-120 T 01-11-2018 CDA09_00840 fc28ee76fdc0e675f717ca0f54fb7f06 367 Hamap MF_01011 tRNA/tmRNA (uracil-C(5))-methyltransferase [trmA]. 4 363 40.485 T 01-11-2018 IPR011869 tRNA/tmRNA (uracil-C(5))-methyltransferase, TrmA GO:0006396|GO:0030697 CDA09_00840 fc28ee76fdc0e675f717ca0f54fb7f06 367 Gene3D G3DSA:3.40.1350.30 45 186 7.2E-120 T 01-11-2018 CDA09_00840 fc28ee76fdc0e675f717ca0f54fb7f06 367 SUPERFAMILY SSF53335 9 362 5.86E-47 T 01-11-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase CDA09_00840 fc28ee76fdc0e675f717ca0f54fb7f06 367 ProSitePatterns PS01231 RNA methyltransferase trmA family signature 2. 345 355 - T 01-11-2018 IPR030391 RNA methyltransferase TrmA, conserved site CDA09_00840 fc28ee76fdc0e675f717ca0f54fb7f06 367 Pfam PF05958 tRNA (Uracil-5-)-methyltransferase 11 363 2.9E-145 T 01-11-2018 IPR010280 (Uracil-5)-methyltransferase family GO:0006396|GO:0008173 CDA09_03480 9a01fae67f67764b3100a2f9ec54dc67 593 PIRSF PIRSF000719 6 582 7.5E-232 T 01-11-2018 IPR010452 Isocitrate dehydrogenase kinasephosphatase GO:0005737|GO:0006006|GO:0008772|GO:0016791 CDA09_03480 9a01fae67f67764b3100a2f9ec54dc67 593 ProDom PD043552 KINASE KINASE/PHOSPHATASE ISOCITRATE DEHYDROGENASE 3.1.3.- IDH TRANSFERASE IDHK/P HYDROLASE ENZYME 12 576 0.0 T 01-11-2018 IPR010452 Isocitrate dehydrogenase kinasephosphatase GO:0005737|GO:0006006|GO:0008772|GO:0016791 CDA09_03480 9a01fae67f67764b3100a2f9ec54dc67 593 Hamap MF_00747 Isocitrate dehydrogenase kinase/phosphatase [aceK]. 6 577 44.96 T 01-11-2018 IPR010452 Isocitrate dehydrogenase kinasephosphatase GO:0005737|GO:0006006|GO:0008772|GO:0016791 CDA09_03480 9a01fae67f67764b3100a2f9ec54dc67 593 Pfam PF06315 Isocitrate dehydrogenase kinase/phosphatase (AceK) 14 573 1.2E-255 T 01-11-2018 IPR010452 Isocitrate dehydrogenase kinasephosphatase GO:0005737|GO:0006006|GO:0008772|GO:0016791 CDA09_12290 8cbd5f00955a21cc757df64bbf2f71a2 81 SMART SM00704 11 48 7.7E-12 T 01-11-2018 IPR018967 Iron sulphur-containing domain, CDGSH-type GO:0043231|GO:0051537 CDA09_12290 8cbd5f00955a21cc757df64bbf2f71a2 81 SMART SM00704 49 80 0.015 T 01-11-2018 IPR018967 Iron sulphur-containing domain, CDGSH-type GO:0043231|GO:0051537 CDA09_12290 8cbd5f00955a21cc757df64bbf2f71a2 81 Pfam PF09360 Iron-binding zinc finger CDGSH type 12 43 9.4E-12 T 01-11-2018 IPR018967 Iron sulphur-containing domain, CDGSH-type GO:0043231|GO:0051537 CDA09_12290 8cbd5f00955a21cc757df64bbf2f71a2 81 Pfam PF09360 Iron-binding zinc finger CDGSH type 59 79 1.8E-8 T 01-11-2018 IPR018967 Iron sulphur-containing domain, CDGSH-type GO:0043231|GO:0051537 CDA09_12290 8cbd5f00955a21cc757df64bbf2f71a2 81 Gene3D G3DSA:3.40.5.90 1 81 7.4E-35 T 01-11-2018 CDA09_03980 956cfeffa0430974ff747448720c78a3 308 Hamap MF_01428 Glutamyl-Q tRNA(Asp) synthetase [gluQ]. 8 298 43.293 T 01-11-2018 IPR022380 Glutamyl-Q tRNA(Asp) synthetase GO:0000166|GO:0004812|GO:0006400 CDA09_03980 956cfeffa0430974ff747448720c78a3 308 PRINTS PR00987 Glutamyl-tRNA synthetase signature 40 53 1.1E-12 T 01-11-2018 IPR000924 Glutamyl/glutaminyl-tRNA synthetase GO:0000166|GO:0004812|GO:0005524|GO:0005737|GO:0043039 CDA09_03980 956cfeffa0430974ff747448720c78a3 308 PRINTS PR00987 Glutamyl-tRNA synthetase signature 178 188 1.1E-12 T 01-11-2018 IPR000924 Glutamyl/glutaminyl-tRNA synthetase GO:0000166|GO:0004812|GO:0005524|GO:0005737|GO:0043039 CDA09_03980 956cfeffa0430974ff747448720c78a3 308 PRINTS PR00987 Glutamyl-tRNA synthetase signature 25 36 1.1E-12 T 01-11-2018 IPR000924 Glutamyl/glutaminyl-tRNA synthetase GO:0000166|GO:0004812|GO:0005524|GO:0005737|GO:0043039 CDA09_03980 956cfeffa0430974ff747448720c78a3 308 PRINTS PR00987 Glutamyl-tRNA synthetase signature 194 202 1.1E-12 T 01-11-2018 IPR000924 Glutamyl/glutaminyl-tRNA synthetase GO:0000166|GO:0004812|GO:0005524|GO:0005737|GO:0043039 CDA09_03980 956cfeffa0430974ff747448720c78a3 308 PRINTS PR00987 Glutamyl-tRNA synthetase signature 11 23 1.1E-12 T 01-11-2018 IPR000924 Glutamyl/glutaminyl-tRNA synthetase GO:0000166|GO:0004812|GO:0005524|GO:0005737|GO:0043039 CDA09_03980 956cfeffa0430974ff747448720c78a3 308 TIGRFAM TIGR03838 queuosine_YadB: glutamyl-queuosine tRNA(Asp) synthetase 8 278 1.6E-109 T 01-11-2018 IPR022380 Glutamyl-Q tRNA(Asp) synthetase GO:0000166|GO:0004812|GO:0006400 CDA09_03980 956cfeffa0430974ff747448720c78a3 308 Gene3D G3DSA:3.40.50.620 8 292 4.1E-96 T 01-11-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold CDA09_03980 956cfeffa0430974ff747448720c78a3 308 SUPERFAMILY SSF52374 8 294 2.96E-80 T 01-11-2018 CDA09_03980 956cfeffa0430974ff747448720c78a3 308 Pfam PF00749 tRNA synthetases class I (E and Q), catalytic domain 11 243 3.0E-36 T 01-11-2018 IPR020058 Glutamyl/glutaminyl-tRNA synthetase, class Ib, catalytic domain GO:0004812|GO:0005524|GO:0043039 CDA09_03980 956cfeffa0430974ff747448720c78a3 308 Gene3D G3DSA:3.40.50.620 83 226 4.1E-96 T 01-11-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold CDA09_15310 c0db07a1d5ceed85e0d8fbacb91e9a8a 167 Pfam PF02620 Uncharacterized ACR, COG1399 60 160 2.2E-15 T 01-11-2018 IPR003772 Large ribosomal RNA subunit accumulation protein YceD CDA09_12415 646d549a32ed13f8f4869cf0d11c05a7 180 Pfam PF00877 NlpC/P60 family 70 174 2.5E-22 T 01-11-2018 IPR000064 Endopeptidase, NLPC/P60 domain CDA09_12415 646d549a32ed13f8f4869cf0d11c05a7 180 Gene3D G3DSA:3.90.1720.10 16 170 1.2E-33 T 01-11-2018 CDA09_12415 646d549a32ed13f8f4869cf0d11c05a7 180 SUPERFAMILY SSF54001 56 175 2.11E-34 T 01-11-2018 IPR038765 Papain-like cysteine peptidase superfamily CDA09_03225 ee3475e485ea69edf0d35192c2568bc8 1149 Gene3D G3DSA:1.10.472.90 823 953 1.3E-269 T 01-11-2018 CDA09_03225 ee3475e485ea69edf0d35192c2568bc8 1149 ProSitePatterns PS00188 Biotin-requiring enzymes attachment site. 1105 1122 - T 01-11-2018 IPR001882 Biotin-binding site Reactome: R-HSA-196780|Reactome: R-HSA-3371599 CDA09_03225 ee3475e485ea69edf0d35192c2568bc8 1149 Pfam PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain 119 326 8.7E-71 T 01-11-2018 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 CDA09_03225 ee3475e485ea69edf0d35192c2568bc8 1149 Gene3D G3DSA:3.30.470.130 1 461 3.2E-198 T 01-11-2018 CDA09_03225 ee3475e485ea69edf0d35192c2568bc8 1149 Gene3D G3DSA:3.10.600.10 464 503 4.0E-7 T 01-11-2018 CDA09_03225 ee3475e485ea69edf0d35192c2568bc8 1149 SUPERFAMILY SSF56059 86 357 4.07E-66 T 01-11-2018 CDA09_03225 ee3475e485ea69edf0d35192c2568bc8 1149 TIGRFAM TIGR01235 pyruv_carbox: pyruvate carboxylase 6 1148 0.0 T 01-11-2018 IPR005930 Pyruvate carboxylase GO:0004736|GO:0005524|GO:0006090|GO:0006094|GO:0009374 KEGG: 00020+6.4.1.1|KEGG: 00620+6.4.1.1|KEGG: 00720+6.4.1.1|MetaCyc: PWY-5750|MetaCyc: PWY-6142|MetaCyc: PWY-6146|Reactome: R-HSA-196780|Reactome: R-HSA-3371599|Reactome: R-HSA-70263 CDA09_03225 ee3475e485ea69edf0d35192c2568bc8 1149 SUPERFAMILY SSF52440 2 116 1.51E-44 T 01-11-2018 IPR016185 Pre-ATP-grasp domain superfamily CDA09_03225 ee3475e485ea69edf0d35192c2568bc8 1149 SUPERFAMILY SSF89000 836 1013 2.9E-54 T 01-11-2018 CDA09_03225 ee3475e485ea69edf0d35192c2568bc8 1149 Pfam PF02436 Conserved carboxylase domain 831 1030 1.1E-71 T 01-11-2018 IPR003379 Carboxylase, conserved domain Reactome: R-HSA-196780|Reactome: R-HSA-3371599|Reactome: R-HSA-70263 CDA09_03225 ee3475e485ea69edf0d35192c2568bc8 1149 SUPERFAMILY SSF51230 1070 1148 1.44E-19 T 01-11-2018 IPR011053 Single hybrid motif CDA09_03225 ee3475e485ea69edf0d35192c2568bc8 1149 PIRSF PIRSF001594 1 1149 0.0 T 01-11-2018 IPR005930 Pyruvate carboxylase GO:0004736|GO:0005524|GO:0006090|GO:0006094|GO:0009374 KEGG: 00020+6.4.1.1|KEGG: 00620+6.4.1.1|KEGG: 00720+6.4.1.1|MetaCyc: PWY-5750|MetaCyc: PWY-6142|MetaCyc: PWY-6146|Reactome: R-HSA-196780|Reactome: R-HSA-3371599|Reactome: R-HSA-70263 CDA09_03225 ee3475e485ea69edf0d35192c2568bc8 1149 Gene3D G3DSA:2.40.50.100 1072 1149 1.1E-22 T 01-11-2018 CDA09_03225 ee3475e485ea69edf0d35192c2568bc8 1149 Pfam PF00682 HMGL-like 536 808 1.6E-33 T 01-11-2018 IPR000891 Pyruvate carboxyltransferase GO:0003824 CDA09_03225 ee3475e485ea69edf0d35192c2568bc8 1149 ProSitePatterns PS00866 Carbamoyl-phosphate synthase subdomain signature 1. 156 170 - T 01-11-2018 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 CDA09_03225 ee3475e485ea69edf0d35192c2568bc8 1149 SMART SM00878 346 453 6.8E-49 T 01-11-2018 IPR005482 Biotin carboxylase, C-terminal Reactome: R-HSA-196780|Reactome: R-HSA-3371599 CDA09_03225 ee3475e485ea69edf0d35192c2568bc8 1149 Gene3D G3DSA:3.10.600.10 511 1061 1.3E-269 T 01-11-2018 CDA09_03225 ee3475e485ea69edf0d35192c2568bc8 1149 Pfam PF02785 Biotin carboxylase C-terminal domain 346 453 6.1E-31 T 01-11-2018 IPR005482 Biotin carboxylase, C-terminal Reactome: R-HSA-196780|Reactome: R-HSA-3371599 CDA09_03225 ee3475e485ea69edf0d35192c2568bc8 1149 ProSitePatterns PS00867 Carbamoyl-phosphate synthase subdomain signature 2. 290 297 - T 01-11-2018 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 CDA09_03225 ee3475e485ea69edf0d35192c2568bc8 1149 Pfam PF00364 Biotin-requiring enzyme 1082 1148 7.9E-15 T 01-11-2018 IPR000089 Biotin/lipoyl attachment CDA09_03225 ee3475e485ea69edf0d35192c2568bc8 1149 SUPERFAMILY SSF51246 341 459 2.3E-36 T 01-11-2018 IPR011054 Rudiment single hybrid motif Reactome: R-HSA-196780 CDA09_03225 ee3475e485ea69edf0d35192c2568bc8 1149 Pfam PF00289 Biotin carboxylase, N-terminal domain 4 113 3.1E-42 T 01-11-2018 IPR005481 Biotin carboxylase-like, N-terminal domain Reactome: R-HSA-196780|Reactome: R-HSA-3371599 CDA09_03225 ee3475e485ea69edf0d35192c2568bc8 1149 Gene3D G3DSA:3.20.20.70 513 822 1.3E-269 T 01-11-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 CDA09_03225 ee3475e485ea69edf0d35192c2568bc8 1149 Gene3D G3DSA:1.10.10.60 954 999 1.3E-269 T 01-11-2018 CDA09_03225 ee3475e485ea69edf0d35192c2568bc8 1149 SUPERFAMILY SSF51569 528 839 5.86E-90 T 01-11-2018 CDA09_15225 db5baec07cabbc11ada1bf4c03a0fd53 262 TIGRFAM TIGR02227 sigpep_I_bact: signal peptidase I 44 252 1.8E-49 T 01-11-2018 IPR000223 Peptidase S26A, signal peptidase I GO:0006508|GO:0008236|GO:0016020 CDA09_15225 db5baec07cabbc11ada1bf4c03a0fd53 262 SUPERFAMILY SSF51306 56 258 8.89E-70 T 01-11-2018 IPR036286 LexA/Signal peptidase-like superfamily CDA09_15225 db5baec07cabbc11ada1bf4c03a0fd53 262 Gene3D G3DSA:2.10.109.10 56 252 2.8E-74 T 01-11-2018 CDA09_15225 db5baec07cabbc11ada1bf4c03a0fd53 262 ProSitePatterns PS00761 Signal peptidases I signature 3. 217 230 - T 01-11-2018 IPR019758 Peptidase S26A, signal peptidase I, conserved site GO:0008236|GO:0016021 CDA09_15225 db5baec07cabbc11ada1bf4c03a0fd53 262 Pfam PF00717 Peptidase S24-like 64 146 6.2E-20 T 01-11-2018 IPR015927 Peptidase S24/S26A/S26B/S26C CDA09_15225 db5baec07cabbc11ada1bf4c03a0fd53 262 ProSitePatterns PS00501 Signal peptidases I serine active site. 67 74 - T 01-11-2018 IPR019756 Peptidase S26A, signal peptidase I, serine active site GO:0008236|GO:0016021 Reactome: R-HSA-1799339|Reactome: R-HSA-381771|Reactome: R-HSA-400511|Reactome: R-HSA-422085 CDA09_15225 db5baec07cabbc11ada1bf4c03a0fd53 262 Pfam PF10502 Signal peptidase, peptidase S26 210 249 3.9E-5 T 01-11-2018 IPR019533 Peptidase S26 CDA09_15225 db5baec07cabbc11ada1bf4c03a0fd53 262 ProSitePatterns PS00760 Signal peptidases I lysine active site. 124 136 - T 01-11-2018 IPR019757 Peptidase S26A, signal peptidase I, lysine active site GO:0008236|GO:0016021 CDA09_15225 db5baec07cabbc11ada1bf4c03a0fd53 262 PRINTS PR00727 Bacterial leader peptidase 1 (S26A) family signature 122 134 5.5E-25 T 01-11-2018 IPR000223 Peptidase S26A, signal peptidase I GO:0006508|GO:0008236|GO:0016020 CDA09_15225 db5baec07cabbc11ada1bf4c03a0fd53 262 PRINTS PR00727 Bacterial leader peptidase 1 (S26A) family signature 58 74 5.5E-25 T 01-11-2018 IPR000223 Peptidase S26A, signal peptidase I GO:0006508|GO:0008236|GO:0016020 CDA09_15225 db5baec07cabbc11ada1bf4c03a0fd53 262 PRINTS PR00727 Bacterial leader peptidase 1 (S26A) family signature 212 231 5.5E-25 T 01-11-2018 IPR000223 Peptidase S26A, signal peptidase I GO:0006508|GO:0008236|GO:0016020 CDA09_15225 db5baec07cabbc11ada1bf4c03a0fd53 262 Gene3D G3DSA:2.170.230.10 133 211 2.8E-74 T 01-11-2018 CDA09_01790 c0875b247e06612f8351138809f9b6bf 510 Gene3D G3DSA:3.40.50.300 214 380 2.9E-50 T 01-11-2018 CDA09_01790 c0875b247e06612f8351138809f9b6bf 510 ProSitePatterns PS00039 DEAD-box subfamily ATP-dependent helicases signature. 153 161 - T 01-11-2018 IPR000629 ATP-dependent RNA helicase DEAD-box, conserved site CDA09_01790 c0875b247e06612f8351138809f9b6bf 510 SMART SM00490 259 340 1.4E-34 T 01-11-2018 IPR001650 Helicase, C-terminal CDA09_01790 c0875b247e06612f8351138809f9b6bf 510 Pfam PF00270 DEAD/DEAH box helicase 25 190 7.6E-47 T 01-11-2018 IPR011545 DEAD/DEAH box helicase domain GO:0003676|GO:0005524 CDA09_01790 c0875b247e06612f8351138809f9b6bf 510 SMART SM00487 20 222 4.5E-57 T 01-11-2018 IPR014001 Helicase superfamily 1/2, ATP-binding domain CDA09_01790 c0875b247e06612f8351138809f9b6bf 510 Pfam PF00271 Helicase conserved C-terminal domain 238 340 2.3E-31 T 01-11-2018 IPR001650 Helicase, C-terminal CDA09_01790 c0875b247e06612f8351138809f9b6bf 510 Gene3D G3DSA:3.40.50.300 1 210 2.1E-75 T 01-11-2018 CDA09_01790 c0875b247e06612f8351138809f9b6bf 510 SUPERFAMILY SSF52540 73 361 5.09E-72 T 01-11-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CDA09_14575 451c8392aad360c68dd6c5565414b810 155 Pfam PF01243 Pyridoxamine 5'-phosphate oxidase 6 91 1.3E-10 T 01-11-2018 IPR011576 Pyridoxamine 5'-phosphate oxidase, putative KEGG: 00750+1.4.3.5|MetaCyc: PWY-7204|MetaCyc: PWY-7282|Reactome: R-HSA-964975 CDA09_14575 451c8392aad360c68dd6c5565414b810 155 SUPERFAMILY SSF50475 1 146 3.18E-26 T 01-11-2018 CDA09_14575 451c8392aad360c68dd6c5565414b810 155 PIRSF PIRSF009554 1 155 1.1E-43 T 01-11-2018 IPR011194 Uncharacterised protein family UPF0306 CDA09_14575 451c8392aad360c68dd6c5565414b810 155 Gene3D G3DSA:2.30.110.10 1 152 3.6E-29 T 01-11-2018 IPR012349 FMN-binding split barrel GO:0048037 CDA09_18850 77224a3c2e58b2d2d745712a355a4875 725 Pfam PF00005 ABC transporter 507 656 3.1E-33 T 01-11-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 CDA09_18850 77224a3c2e58b2d2d745712a355a4875 725 SUPERFAMILY SSF52540 480 714 8.31E-77 T 01-11-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CDA09_18850 77224a3c2e58b2d2d745712a355a4875 725 SMART SM00382 516 702 4.5E-15 T 01-11-2018 IPR003593 AAA+ ATPase domain CDA09_18850 77224a3c2e58b2d2d745712a355a4875 725 ProSitePatterns PS00211 ABC transporters family signature. 628 642 - T 01-11-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 CDA09_18850 77224a3c2e58b2d2d745712a355a4875 725 Pfam PF00664 ABC transporter transmembrane region 179 438 2.5E-18 T 01-11-2018 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0016021|GO:0042626|GO:0055085 CDA09_18850 77224a3c2e58b2d2d745712a355a4875 725 Gene3D G3DSA:1.20.1560.10 163 474 1.6E-48 T 01-11-2018 IPR036640 ABC transporter type 1, transmembrane domain superfamily GO:0005524|GO:0016021 CDA09_18850 77224a3c2e58b2d2d745712a355a4875 725 Gene3D G3DSA:3.90.70.10 20 147 5.9E-34 T 01-11-2018 CDA09_18850 77224a3c2e58b2d2d745712a355a4875 725 SUPERFAMILY SSF90123 163 475 1.57E-46 T 01-11-2018 IPR036640 ABC transporter type 1, transmembrane domain superfamily GO:0005524|GO:0016021 CDA09_18850 77224a3c2e58b2d2d745712a355a4875 725 TIGRFAM TIGR03375 type_I_sec_LssB: type I secretion system ATPase 24 719 2.9E-303 T 01-11-2018 IPR017750 ATPase, type I secretion system CDA09_18850 77224a3c2e58b2d2d745712a355a4875 725 Gene3D G3DSA:3.40.50.300 480 721 2.8E-83 T 01-11-2018 CDA09_03830 d15a1a6dd1118d70317270444a6a6944 264 ProSitePatterns PS00091 Thymidylate synthase active site. 126 154 - T 01-11-2018 IPR020940 Thymidylate synthase, active site GO:0004799|GO:0006231 KEGG: 00240+2.1.1.45|KEGG: 00670+2.1.1.45|MetaCyc: PWY-3841|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7198|MetaCyc: PWY-7199|MetaCyc: PWY-7210|Reactome: R-HSA-499943|Reactome: R-HSA-539107 CDA09_03830 d15a1a6dd1118d70317270444a6a6944 264 PRINTS PR00108 Thymidylate synthase family signature 141 156 3.5E-48 T 01-11-2018 IPR000398 Thymidylate synthase GO:0004799|GO:0006231 KEGG: 00240+2.1.1.45|KEGG: 00670+2.1.1.45|MetaCyc: PWY-3841|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7198|MetaCyc: PWY-7199|MetaCyc: PWY-7210|Reactome: R-HSA-499943|Reactome: R-HSA-539107 CDA09_03830 d15a1a6dd1118d70317270444a6a6944 264 PRINTS PR00108 Thymidylate synthase family signature 159 185 3.5E-48 T 01-11-2018 IPR000398 Thymidylate synthase GO:0004799|GO:0006231 KEGG: 00240+2.1.1.45|KEGG: 00670+2.1.1.45|MetaCyc: PWY-3841|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7198|MetaCyc: PWY-7199|MetaCyc: PWY-7210|Reactome: R-HSA-499943|Reactome: R-HSA-539107 CDA09_03830 d15a1a6dd1118d70317270444a6a6944 264 PRINTS PR00108 Thymidylate synthase family signature 197 214 3.5E-48 T 01-11-2018 IPR000398 Thymidylate synthase GO:0004799|GO:0006231 KEGG: 00240+2.1.1.45|KEGG: 00670+2.1.1.45|MetaCyc: PWY-3841|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7198|MetaCyc: PWY-7199|MetaCyc: PWY-7210|Reactome: R-HSA-499943|Reactome: R-HSA-539107 CDA09_03830 d15a1a6dd1118d70317270444a6a6944 264 PRINTS PR00108 Thymidylate synthase family signature 42 63 3.5E-48 T 01-11-2018 IPR000398 Thymidylate synthase GO:0004799|GO:0006231 KEGG: 00240+2.1.1.45|KEGG: 00670+2.1.1.45|MetaCyc: PWY-3841|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7198|MetaCyc: PWY-7199|MetaCyc: PWY-7210|Reactome: R-HSA-499943|Reactome: R-HSA-539107 CDA09_03830 d15a1a6dd1118d70317270444a6a6944 264 PRINTS PR00108 Thymidylate synthase family signature 115 134 3.5E-48 T 01-11-2018 IPR000398 Thymidylate synthase GO:0004799|GO:0006231 KEGG: 00240+2.1.1.45|KEGG: 00670+2.1.1.45|MetaCyc: PWY-3841|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7198|MetaCyc: PWY-7199|MetaCyc: PWY-7210|Reactome: R-HSA-499943|Reactome: R-HSA-539107 CDA09_03830 d15a1a6dd1118d70317270444a6a6944 264 TIGRFAM TIGR03284 thym_sym: thymidylate synthase 2 84 4.3E-43 T 01-11-2018 IPR000398 Thymidylate synthase GO:0004799|GO:0006231 KEGG: 00240+2.1.1.45|KEGG: 00670+2.1.1.45|MetaCyc: PWY-3841|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7198|MetaCyc: PWY-7199|MetaCyc: PWY-7210|Reactome: R-HSA-499943|Reactome: R-HSA-539107 CDA09_03830 d15a1a6dd1118d70317270444a6a6944 264 TIGRFAM TIGR03284 thym_sym: thymidylate synthase 85 264 1.2E-94 T 01-11-2018 IPR000398 Thymidylate synthase GO:0004799|GO:0006231 KEGG: 00240+2.1.1.45|KEGG: 00670+2.1.1.45|MetaCyc: PWY-3841|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7198|MetaCyc: PWY-7199|MetaCyc: PWY-7210|Reactome: R-HSA-499943|Reactome: R-HSA-539107 CDA09_03830 d15a1a6dd1118d70317270444a6a6944 264 Hamap MF_00008 Thymidylate synthase [thyA]. 1 264 41.201 T 01-11-2018 IPR000398 Thymidylate synthase GO:0004799|GO:0006231 KEGG: 00240+2.1.1.45|KEGG: 00670+2.1.1.45|MetaCyc: PWY-3841|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7198|MetaCyc: PWY-7199|MetaCyc: PWY-7210|Reactome: R-HSA-499943|Reactome: R-HSA-539107 CDA09_03830 d15a1a6dd1118d70317270444a6a6944 264 SUPERFAMILY SSF55831 1 264 1.96E-129 T 01-11-2018 IPR036926 Thymidylate synthase/dCMP hydroxymethylase superfamily KEGG: 00240+2.1.1.45|KEGG: 00670+2.1.1.45|MetaCyc: PWY-3841|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7198|MetaCyc: PWY-7199|MetaCyc: PWY-7210|Reactome: R-HSA-499943|Reactome: R-HSA-539107 CDA09_03830 d15a1a6dd1118d70317270444a6a6944 264 Pfam PF00303 Thymidylate synthase 2 264 1.1E-124 T 01-11-2018 IPR023451 Thymidylate synthase/dCMP hydroxymethylase domain KEGG: 00240+2.1.1.45|KEGG: 00670+2.1.1.45|MetaCyc: PWY-3841|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7198|MetaCyc: PWY-7199|MetaCyc: PWY-7210|Reactome: R-HSA-499943|Reactome: R-HSA-539107 CDA09_03830 d15a1a6dd1118d70317270444a6a6944 264 Gene3D G3DSA:3.30.572.10 1 264 5.6E-132 T 01-11-2018 IPR036926 Thymidylate synthase/dCMP hydroxymethylase superfamily KEGG: 00240+2.1.1.45|KEGG: 00670+2.1.1.45|MetaCyc: PWY-3841|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7198|MetaCyc: PWY-7199|MetaCyc: PWY-7210|Reactome: R-HSA-499943|Reactome: R-HSA-539107 CDA09_22675 235bad401f8f8f8432d553247728112d 267 Gene3D G3DSA:3.90.226.10 1 205 1.6E-58 T 01-11-2018 CDA09_22675 235bad401f8f8f8432d553247728112d 267 SUPERFAMILY SSF52096 14 261 3.11E-61 T 01-11-2018 IPR029045 ClpP/crotonase-like domain superfamily CDA09_22675 235bad401f8f8f8432d553247728112d 267 ProSitePatterns PS00166 Enoyl-CoA hydratase/isomerase signature. 106 126 - T 01-11-2018 IPR018376 Enoyl-CoA hydratase/isomerase, conserved site GO:0003824 CDA09_22675 235bad401f8f8f8432d553247728112d 267 Pfam PF00378 Enoyl-CoA hydratase/isomerase 15 262 6.2E-40 T 01-11-2018 IPR001753 Enoyl-CoA hydratase/isomerase GO:0003824 CDA09_22675 235bad401f8f8f8432d553247728112d 267 Gene3D G3DSA:1.10.12.10 206 262 6.1E-30 T 01-11-2018 IPR014748 Enoyl-CoA hydratase, C-terminal CDA09_11010 b5751e27e8e2b01a353a9765e4786606 356 Pfam PF01381 Helix-turn-helix 12 64 2.2E-16 T 01-11-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 CDA09_11010 b5751e27e8e2b01a353a9765e4786606 356 SUPERFAMILY SSF51182 83 175 3.85E-14 T 01-11-2018 IPR011051 RmlC-like cupin domain superfamily CDA09_11010 b5751e27e8e2b01a353a9765e4786606 356 Gene3D G3DSA:2.60.120.10 86 181 9.2E-18 T 01-11-2018 IPR014710 RmlC-like jelly roll fold CDA09_11010 b5751e27e8e2b01a353a9765e4786606 356 SMART SM00530 10 65 2.3E-15 T 01-11-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 CDA09_11010 b5751e27e8e2b01a353a9765e4786606 356 Gene3D G3DSA:1.10.260.40 2 75 1.1E-17 T 01-11-2018 CDA09_11010 b5751e27e8e2b01a353a9765e4786606 356 SUPERFAMILY SSF47413 2 70 1.46E-17 T 01-11-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 CDA09_20885 86642b44478be3c1c1c832b4b60b8686 218 Pfam PF13417 Glutathione S-transferase, N-terminal domain 9 78 3.2E-12 T 01-11-2018 IPR004045 Glutathione S-transferase, N-terminal GO:0005515 CDA09_20885 86642b44478be3c1c1c832b4b60b8686 218 SUPERFAMILY SSF47616 80 201 6.68E-16 T 01-11-2018 IPR036282 Glutathione S-transferase, C-terminal domain superfamily CDA09_20885 86642b44478be3c1c1c832b4b60b8686 218 SUPERFAMILY SSF52833 6 88 2.52E-17 T 01-11-2018 IPR036249 Thioredoxin-like superfamily CDA09_20885 86642b44478be3c1c1c832b4b60b8686 218 Gene3D G3DSA:1.20.1050.10 82 196 3.0E-57 T 01-11-2018 CDA09_20885 86642b44478be3c1c1c832b4b60b8686 218 Gene3D G3DSA:3.40.30.10 5 200 3.0E-57 T 01-11-2018 CDA09_07875 b2a0ddf5eba34949f30b0af7f46b4595 241 SUPERFAMILY SSF161098 14 221 1.22E-41 T 01-11-2018 IPR035906 MetI-like superfamily CDA09_07875 b2a0ddf5eba34949f30b0af7f46b4595 241 TIGRFAM TIGR01726 HEQRo_perm_3TM: amino ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family 13 89 9.8E-21 T 01-11-2018 IPR010065 Amino acid ABC transporter, permease protein, 3-TM domain GO:0016021|GO:0022857|GO:0043190|GO:0071705 CDA09_07875 b2a0ddf5eba34949f30b0af7f46b4595 241 Gene3D G3DSA:1.10.3720.10 3 230 1.6E-52 T 01-11-2018 IPR035906 MetI-like superfamily CDA09_07875 b2a0ddf5eba34949f30b0af7f46b4595 241 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 31 229 8.8E-21 T 01-11-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 CDA09_15720 a39013cc76e516c4d3d0ee970c66dbff 179 PIRSF PIRSF004749 1 169 5.5E-45 T 01-11-2018 IPR023635 Peptide deformylase CDA09_15720 a39013cc76e516c4d3d0ee970c66dbff 179 SUPERFAMILY SSF56420 2 166 6.15E-56 T 01-11-2018 IPR036821 Peptide deformylase superfamily CDA09_15720 a39013cc76e516c4d3d0ee970c66dbff 179 TIGRFAM TIGR00079 pept_deformyl: peptide deformylase 5 159 4.4E-32 T 01-11-2018 IPR023635 Peptide deformylase CDA09_15720 a39013cc76e516c4d3d0ee970c66dbff 179 Hamap MF_00163 Peptide deformylase [def]. 2 171 25.699 T 01-11-2018 IPR023635 Peptide deformylase CDA09_15720 a39013cc76e516c4d3d0ee970c66dbff 179 PRINTS PR01576 Peptide deformylase signature 129 158 2.0E-26 T 01-11-2018 IPR023635 Peptide deformylase CDA09_15720 a39013cc76e516c4d3d0ee970c66dbff 179 PRINTS PR01576 Peptide deformylase signature 34 63 2.0E-26 T 01-11-2018 IPR023635 Peptide deformylase CDA09_15720 a39013cc76e516c4d3d0ee970c66dbff 179 PRINTS PR01576 Peptide deformylase signature 110 128 2.0E-26 T 01-11-2018 IPR023635 Peptide deformylase CDA09_15720 a39013cc76e516c4d3d0ee970c66dbff 179 PRINTS PR01576 Peptide deformylase signature 98 109 2.0E-26 T 01-11-2018 IPR023635 Peptide deformylase CDA09_15720 a39013cc76e516c4d3d0ee970c66dbff 179 Gene3D G3DSA:3.90.45.10 1 177 8.7E-64 T 01-11-2018 IPR036821 Peptide deformylase superfamily CDA09_15720 a39013cc76e516c4d3d0ee970c66dbff 179 Pfam PF01327 Polypeptide deformylase 4 160 3.2E-44 T 01-11-2018 IPR023635 Peptide deformylase CDA09_14180 c5c13cac6b4289eae5f44e9155689565 761 Gene3D G3DSA:3.40.50.300 498 756 1.5E-21 T 01-11-2018 CDA09_14180 c5c13cac6b4289eae5f44e9155689565 761 SUPERFAMILY SSF52540 60 416 3.59E-23 T 01-11-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CDA09_14180 c5c13cac6b4289eae5f44e9155689565 761 Gene3D G3DSA:3.40.50.10810 282 461 6.3E-7 T 01-11-2018 IPR038718 SNF2-like, N-terminal domain superfamily CDA09_14180 c5c13cac6b4289eae5f44e9155689565 761 SUPERFAMILY SSF52540 355 739 2.04E-26 T 01-11-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CDA09_14180 c5c13cac6b4289eae5f44e9155689565 761 Gene3D G3DSA:3.40.50.300 57 163 5.0E-9 T 01-11-2018 CDA09_14180 c5c13cac6b4289eae5f44e9155689565 761 SMART SM00487 60 426 1.4E-7 T 01-11-2018 IPR014001 Helicase superfamily 1/2, ATP-binding domain CDA09_12865 cdf8a46808ba89d51b5c43f4fecc89b9 362 TIGRFAM TIGR04337 AmmeMemoSam_rS: AmmeMemoRadiSam system radical SAM enzyme 6 353 5.8E-190 T 01-11-2018 IPR027596 AmmeMemoRadiSam system radical SAM enzyme CDA09_12865 cdf8a46808ba89d51b5c43f4fecc89b9 362 SUPERFAMILY SSF102114 44 314 3.14E-41 T 01-11-2018 CDA09_12865 cdf8a46808ba89d51b5c43f4fecc89b9 362 Pfam PF04055 Radical SAM superfamily 80 232 2.0E-15 T 01-11-2018 IPR007197 Radical SAM GO:0003824|GO:0051536 CDA09_12865 cdf8a46808ba89d51b5c43f4fecc89b9 362 Gene3D G3DSA:3.20.20.70 63 286 1.6E-34 T 01-11-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 CDA09_12865 cdf8a46808ba89d51b5c43f4fecc89b9 362 PIRSF PIRSF004869 5 313 9.2E-94 T 01-11-2018 IPR016431 Pyruvate-formate lyase-activating enzyme, predicted CDA09_18530 075eb3ca74397ddd4980b8627d789f5e 638 Pfam PF13667 ThiC-associated domain 21 98 6.9E-34 T 01-11-2018 IPR025747 ThiC-associated domain KEGG: 00730+4.1.99.17|MetaCyc: PWY-6890 CDA09_18530 075eb3ca74397ddd4980b8627d789f5e 638 Gene3D G3DSA:3.20.20.540 222 535 9.2E-151 T 01-11-2018 IPR038521 ThiC/Bza superfamily KEGG: 00730+4.1.99.17|MetaCyc: PWY-6890 CDA09_18530 075eb3ca74397ddd4980b8627d789f5e 638 Hamap MF_00089 Phosphomethylpyrimidine synthase [thiC]. 138 604 99.305 T 01-11-2018 IPR037509 Phosphomethylpyrimidine synthase GO:0009228|GO:0016830 KEGG: 00730+4.1.99.17|MetaCyc: PWY-6890 CDA09_18530 075eb3ca74397ddd4980b8627d789f5e 638 Pfam PF01964 Radical SAM ThiC family 140 599 1.7E-197 T 01-11-2018 IPR002817 Phosphomethylpyrimidine synthase ThiC/5-hydroxybenzimidazole synthase BzaA/B GO:0009228|GO:0051536 KEGG: 00730+4.1.99.17|MetaCyc: PWY-6890 CDA09_18530 075eb3ca74397ddd4980b8627d789f5e 638 TIGRFAM TIGR00190 thiC: phosphomethylpyrimidine synthase 138 603 7.6E-214 T 01-11-2018 IPR002817 Phosphomethylpyrimidine synthase ThiC/5-hydroxybenzimidazole synthase BzaA/B GO:0009228|GO:0051536 KEGG: 00730+4.1.99.17|MetaCyc: PWY-6890 CDA09_21385 e9dc5f60ca759fbc98926a5fc29963f4 342 Gene3D G3DSA:3.30.420.470 149 340 1.8E-16 T 01-11-2018 CDA09_21385 e9dc5f60ca759fbc98926a5fc29963f4 342 Pfam PF13592 Winged helix-turn helix 95 153 5.3E-19 T 01-11-2018 IPR025959 Winged helix-turn helix domain CDA09_21385 e9dc5f60ca759fbc98926a5fc29963f4 342 SUPERFAMILY SSF46689 15 129 4.3E-12 T 01-11-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 CDA09_21385 e9dc5f60ca759fbc98926a5fc29963f4 342 Pfam PF13358 DDE superfamily endonuclease 169 304 5.7E-33 T 01-11-2018 IPR038717 Tc1-like transposase, DDE domain CDA09_21385 e9dc5f60ca759fbc98926a5fc29963f4 342 Pfam PF13518 Helix-turn-helix domain 18 64 5.8E-10 T 01-11-2018 CDA09_11390 f86695b6629694f90368d7f8e7d40743 504 SUPERFAMILY SSF56954 13 486 8.63E-92 T 01-11-2018 CDA09_11390 f86695b6629694f90368d7f8e7d40743 504 Gene3D G3DSA:2.20.200.10 98 372 1.9E-110 T 01-11-2018 CDA09_11390 f86695b6629694f90368d7f8e7d40743 504 TIGRFAM TIGR01845 outer_NodT: efflux transporter, outer membrane factor (OMF) lipoprotein, NodT family 28 483 9.1E-110 T 01-11-2018 IPR010131 RND efflux system, outer membrane lipoprotein, NodT GO:0016020|GO:0022857|GO:0055085 CDA09_11390 f86695b6629694f90368d7f8e7d40743 504 Pfam PF02321 Outer membrane efflux protein 61 271 1.9E-20 T 01-11-2018 IPR003423 Outer membrane efflux protein GO:0015562|GO:0055085 CDA09_11390 f86695b6629694f90368d7f8e7d40743 504 Pfam PF02321 Outer membrane efflux protein 305 481 4.4E-25 T 01-11-2018 IPR003423 Outer membrane efflux protein GO:0015562|GO:0055085 CDA09_11390 f86695b6629694f90368d7f8e7d40743 504 Gene3D G3DSA:1.20.1600.10 51 484 1.9E-110 T 01-11-2018 CDA09_02560 7b2313769e6256d3b42f75a2e4919c13 373 Pfam PF00534 Glycosyl transferases group 1 195 339 6.8E-31 T 01-11-2018 IPR001296 Glycosyl transferase, family 1 CDA09_02560 7b2313769e6256d3b42f75a2e4919c13 373 Gene3D G3DSA:3.40.50.2000 175 339 6.4E-51 T 01-11-2018 CDA09_02560 7b2313769e6256d3b42f75a2e4919c13 373 Gene3D G3DSA:3.40.50.2000 18 174 6.4E-51 T 01-11-2018 CDA09_02560 7b2313769e6256d3b42f75a2e4919c13 373 Pfam PF13579 Glycosyl transferase 4-like domain 17 171 1.7E-9 T 01-11-2018 IPR028098 Glycosyltransferase subfamily 4-like, N-terminal domain Reactome: R-HSA-446193|Reactome: R-HSA-4549349 CDA09_02560 7b2313769e6256d3b42f75a2e4919c13 373 SUPERFAMILY SSF53756 6 365 2.2E-60 T 01-11-2018 CDA09_09030 4b6abbe4df6c0a6e2ca146796b7a2ad4 355 Pfam PF13452 N-terminal half of MaoC dehydratase 188 231 9.4E-7 T 01-11-2018 IPR039569 N-terminal of MaoC-like dehydratase Reactome: R-HSA-193368|Reactome: R-HSA-2046106|Reactome: R-HSA-389887|Reactome: R-HSA-390247|Reactome: R-HSA-9033241|Reactome: R-HSA-9033500 CDA09_09030 4b6abbe4df6c0a6e2ca146796b7a2ad4 355 SUPERFAMILY SSF54637 2 146 6.63E-14 T 01-11-2018 IPR029069 HotDog domain superfamily CDA09_09030 4b6abbe4df6c0a6e2ca146796b7a2ad4 355 Gene3D G3DSA:3.10.129.10 165 355 3.2E-30 T 01-11-2018 CDA09_09030 4b6abbe4df6c0a6e2ca146796b7a2ad4 355 Gene3D G3DSA:3.10.129.10 2 140 1.3E-17 T 01-11-2018 CDA09_09030 4b6abbe4df6c0a6e2ca146796b7a2ad4 355 SUPERFAMILY SSF54637 188 353 2.24E-15 T 01-11-2018 IPR029069 HotDog domain superfamily CDA09_18790 ed4b510b53863006fa1bb082e2e23802 136 PIRSF PIRSF004638 1 136 2.4E-49 T 01-11-2018 IPR005265 Uncharacterised protein family UPF0093 CDA09_18790 ed4b510b53863006fa1bb082e2e23802 136 Pfam PF03653 Uncharacterised protein family (UPF0093) 3 136 1.8E-45 T 01-11-2018 IPR005265 Uncharacterised protein family UPF0093 CDA09_20500 5fab35014759ecec1bf3830542eb70a5 515 Pfam PF02321 Outer membrane efflux protein 83 288 2.4E-18 T 01-11-2018 IPR003423 Outer membrane efflux protein GO:0015562|GO:0055085 CDA09_20500 5fab35014759ecec1bf3830542eb70a5 515 Pfam PF02321 Outer membrane efflux protein 313 495 1.1E-26 T 01-11-2018 IPR003423 Outer membrane efflux protein GO:0015562|GO:0055085 CDA09_20500 5fab35014759ecec1bf3830542eb70a5 515 Gene3D G3DSA:1.20.1600.10 73 499 1.4E-105 T 01-11-2018 CDA09_20500 5fab35014759ecec1bf3830542eb70a5 515 SUPERFAMILY SSF56954 9 501 5.1E-93 T 01-11-2018 CDA09_20500 5fab35014759ecec1bf3830542eb70a5 515 Gene3D G3DSA:2.20.200.10 120 387 1.4E-105 T 01-11-2018 CDA09_20500 5fab35014759ecec1bf3830542eb70a5 515 TIGRFAM TIGR01845 outer_NodT: efflux transporter, outer membrane factor (OMF) lipoprotein, NodT family 17 498 3.3E-107 T 01-11-2018 IPR010131 RND efflux system, outer membrane lipoprotein, NodT GO:0016020|GO:0022857|GO:0055085 CDA09_12150 7fc8c57c7d7da2bb69981b42e3393324 269 Gene3D G3DSA:3.30.420.40 5 264 1.6E-64 T 01-11-2018 CDA09_12150 7fc8c57c7d7da2bb69981b42e3393324 269 TIGRFAM TIGR00241 CoA_E_activ: putative CoA-substrate-specific enzyme activase 2 263 4.9E-60 T 01-11-2018 IPR008275 CoA enzyme activase CDA09_12150 7fc8c57c7d7da2bb69981b42e3393324 269 Gene3D G3DSA:3.30.420.40 106 249 1.6E-64 T 01-11-2018 CDA09_12150 7fc8c57c7d7da2bb69981b42e3393324 269 SUPERFAMILY SSF53067 1 267 4.56E-30 T 01-11-2018 CDA09_12150 7fc8c57c7d7da2bb69981b42e3393324 269 Pfam PF01869 BadF/BadG/BcrA/BcrD ATPase family 5 264 3.5E-44 T 01-11-2018 IPR002731 ATPase, BadF/BadG/BcrA/BcrD type Reactome: R-HSA-446210 CDA09_17460 c69ca4b88e93f68171db2001b053d201 65 Hamap MF_00514 50S ribosomal protein L35 [rpmI]. 1 64 18.971 T 01-11-2018 IPR001706 Ribosomal protein L35, non-mitochondrial GO:0003735|GO:0005840|GO:0006412 CDA09_17460 c69ca4b88e93f68171db2001b053d201 65 TIGRFAM TIGR00001 rpmI_bact: ribosomal protein bL35 2 64 3.1E-28 T 01-11-2018 IPR001706 Ribosomal protein L35, non-mitochondrial GO:0003735|GO:0005840|GO:0006412 CDA09_17460 c69ca4b88e93f68171db2001b053d201 65 Pfam PF01632 Ribosomal protein L35 2 62 3.8E-27 T 01-11-2018 IPR021137 Ribosomal protein L35 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 CDA09_17460 c69ca4b88e93f68171db2001b053d201 65 SUPERFAMILY SSF143034 2 64 2.62E-25 T 01-11-2018 IPR037229 Ribosomal protein L35 superfamily Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 CDA09_17460 c69ca4b88e93f68171db2001b053d201 65 ProSitePatterns PS00936 Ribosomal protein L35 signature. 5 31 - T 01-11-2018 IPR018265 Ribosomal protein L35, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 CDA09_17460 c69ca4b88e93f68171db2001b053d201 65 PRINTS PR00064 Ribosomal protein L35 signature 21 35 3.9E-19 T 01-11-2018 IPR001706 Ribosomal protein L35, non-mitochondrial GO:0003735|GO:0005840|GO:0006412 CDA09_17460 c69ca4b88e93f68171db2001b053d201 65 PRINTS PR00064 Ribosomal protein L35 signature 36 54 3.9E-19 T 01-11-2018 IPR001706 Ribosomal protein L35, non-mitochondrial GO:0003735|GO:0005840|GO:0006412 CDA09_17460 c69ca4b88e93f68171db2001b053d201 65 PRINTS PR00064 Ribosomal protein L35 signature 3 20 3.9E-19 T 01-11-2018 IPR001706 Ribosomal protein L35, non-mitochondrial GO:0003735|GO:0005840|GO:0006412 CDA09_17460 c69ca4b88e93f68171db2001b053d201 65 Gene3D G3DSA:2.40.50.530 1 65 6.1E-23 T 01-11-2018 CDA09_00305 0086ca67eccc2164c919e58e8d0d4cc7 307 TIGRFAM TIGR01764 excise: DNA binding domain, excisionase family 19 64 9.9E-12 T 01-11-2018 IPR010093 SinI-like, DNA-binding domain GO:0003677 CDA09_00305 0086ca67eccc2164c919e58e8d0d4cc7 307 Pfam PF12728 Helix-turn-helix domain 19 67 6.0E-14 T 01-11-2018 CDA09_00305 0086ca67eccc2164c919e58e8d0d4cc7 307 Pfam PF12727 PBP superfamily domain 101 280 5.2E-34 T 01-11-2018 IPR024370 PBP domain CDA09_12015 bf239702042bf273f98de3ea5bc6e353 138 Pfam PF14464 Prokaryotic homologs of the JAB domain 9 126 1.5E-25 T 01-11-2018 IPR028090 JAB domain, prokaryotic CDA09_12015 bf239702042bf273f98de3ea5bc6e353 138 SMART SM00232 3 136 3.0E-18 T 01-11-2018 IPR000555 JAB1/MPN/MOV34 metalloenzyme domain GO:0005515 CDA09_12015 bf239702042bf273f98de3ea5bc6e353 138 Gene3D G3DSA:3.40.140.10 3 138 4.2E-41 T 01-11-2018 CDA09_12015 bf239702042bf273f98de3ea5bc6e353 138 SUPERFAMILY SSF102712 2 134 1.24E-31 T 01-11-2018 CDA09_07705 ef94bbb863cf3ba74b73d40d6e5eaa76 441 SMART SM00471 198 334 1.4E-7 T 01-11-2018 IPR003607 HD/PDEase domain CDA09_07705 ef94bbb863cf3ba74b73d40d6e5eaa76 441 SMART SM00448 9 121 7.3E-28 T 01-11-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 CDA09_07705 ef94bbb863cf3ba74b73d40d6e5eaa76 441 Gene3D G3DSA:1.10.3210.10 177 369 2.1E-51 T 01-11-2018 CDA09_07705 ef94bbb863cf3ba74b73d40d6e5eaa76 441 SUPERFAMILY SSF52172 9 163 4.98E-38 T 01-11-2018 IPR011006 CheY-like superfamily CDA09_07705 ef94bbb863cf3ba74b73d40d6e5eaa76 441 Pfam PF00072 Response regulator receiver domain 12 121 3.1E-24 T 01-11-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 CDA09_07705 ef94bbb863cf3ba74b73d40d6e5eaa76 441 Pfam PF08668 HDOD domain 201 244 1.4E-6 T 01-11-2018 IPR013976 Metal-dependent hydrolase HDOD CDA09_07705 ef94bbb863cf3ba74b73d40d6e5eaa76 441 Gene3D G3DSA:3.40.50.2300 1 146 1.5E-37 T 01-11-2018 CDA09_07705 ef94bbb863cf3ba74b73d40d6e5eaa76 441 Pfam PF13487 HD domain 257 316 1.5E-17 T 01-11-2018 CDA09_07705 ef94bbb863cf3ba74b73d40d6e5eaa76 441 SUPERFAMILY SSF109604 192 364 1.3E-26 T 01-11-2018 CDA09_10945 f640dbc5f7e05e7ef9198721d809d2e8 413 Gene3D G3DSA:2.102.10.10 40 159 5.5E-162 T 01-11-2018 IPR036922 Rieske [2Fe-2S] iron-sulphur domain superfamily GO:0016491|GO:0051537|GO:0055114 CDA09_10945 f640dbc5f7e05e7ef9198721d809d2e8 413 Gene3D G3DSA:3.90.380.10 14 405 5.5E-162 T 01-11-2018 CDA09_10945 f640dbc5f7e05e7ef9198721d809d2e8 413 Pfam PF00355 Rieske [2Fe-2S] domain 42 124 5.6E-19 T 01-11-2018 IPR017941 Rieske [2Fe-2S] iron-sulphur domain GO:0016491|GO:0051537|GO:0055114 CDA09_10945 f640dbc5f7e05e7ef9198721d809d2e8 413 SUPERFAMILY SSF55961 158 406 4.16E-46 T 01-11-2018 CDA09_10945 f640dbc5f7e05e7ef9198721d809d2e8 413 SUPERFAMILY SSF50022 11 152 1.23E-49 T 01-11-2018 IPR036922 Rieske [2Fe-2S] iron-sulphur domain superfamily GO:0016491|GO:0051537|GO:0055114 CDA09_10945 f640dbc5f7e05e7ef9198721d809d2e8 413 Pfam PF00848 Ring hydroxylating alpha subunit (catalytic domain) 177 409 2.4E-49 T 01-11-2018 IPR015879 Aromatic-ring-hydroxylating dioxygenase, alpha subunit, C-terminal domain GO:0005506|GO:0044237|GO:0051537|GO:0055114 CDA09_10945 f640dbc5f7e05e7ef9198721d809d2e8 413 PRINTS PR00090 Ring hydroxylating dioxygenase alpha-subunit signature 99 119 1.7E-26 T 01-11-2018 IPR001663 Aromatic-ring-hydroxylating dioxygenase, alpha subunit GO:0044237|GO:0051537|GO:0055114 CDA09_10945 f640dbc5f7e05e7ef9198721d809d2e8 413 PRINTS PR00090 Ring hydroxylating dioxygenase alpha-subunit signature 27 52 1.7E-26 T 01-11-2018 IPR001663 Aromatic-ring-hydroxylating dioxygenase, alpha subunit GO:0044237|GO:0051537|GO:0055114 CDA09_10945 f640dbc5f7e05e7ef9198721d809d2e8 413 PRINTS PR00090 Ring hydroxylating dioxygenase alpha-subunit signature 57 72 1.7E-26 T 01-11-2018 IPR001663 Aromatic-ring-hydroxylating dioxygenase, alpha subunit GO:0044237|GO:0051537|GO:0055114 CDA09_10945 f640dbc5f7e05e7ef9198721d809d2e8 413 PRINTS PR00090 Ring hydroxylating dioxygenase alpha-subunit signature 176 198 1.7E-26 T 01-11-2018 IPR001663 Aromatic-ring-hydroxylating dioxygenase, alpha subunit GO:0044237|GO:0051537|GO:0055114 CDA09_10945 f640dbc5f7e05e7ef9198721d809d2e8 413 PRINTS PR00090 Ring hydroxylating dioxygenase alpha-subunit signature 138 164 1.7E-26 T 01-11-2018 IPR001663 Aromatic-ring-hydroxylating dioxygenase, alpha subunit GO:0044237|GO:0051537|GO:0055114 CDA09_10945 f640dbc5f7e05e7ef9198721d809d2e8 413 PRINTS PR00090 Ring hydroxylating dioxygenase alpha-subunit signature 78 98 1.7E-26 T 01-11-2018 IPR001663 Aromatic-ring-hydroxylating dioxygenase, alpha subunit GO:0044237|GO:0051537|GO:0055114 CDA09_17120 154815ed580313c63a91bb8c357f3970 236 Gene3D G3DSA:1.20.1290.10 123 234 2.5E-22 T 01-11-2018 IPR029032 AhpD-like Reactome: R-HSA-5628897 CDA09_17120 154815ed580313c63a91bb8c357f3970 236 Gene3D G3DSA:1.20.1290.10 13 106 9.1E-7 T 01-11-2018 IPR029032 AhpD-like Reactome: R-HSA-5628897 CDA09_17120 154815ed580313c63a91bb8c357f3970 236 SUPERFAMILY SSF69118 17 232 2.54E-32 T 01-11-2018 IPR029032 AhpD-like Reactome: R-HSA-5628897 CDA09_17120 154815ed580313c63a91bb8c357f3970 236 Pfam PF02627 Carboxymuconolactone decarboxylase family 155 230 4.0E-9 T 01-11-2018 IPR003779 Carboxymuconolactone decarboxylase-like GO:0051920|GO:0055114 KEGG: 00480+1.11.1.15 CDA09_04525 82e30cf29cedbf97eb5a0309af6d125f 371 Hamap MF_00160 Phosphoserine aminotransferase [serC]. 15 365 34.242 T 01-11-2018 IPR022278 Phosphoserine aminotransferase GO:0004648|GO:0006564 KEGG: 00260+2.6.1.52|KEGG: 00680+2.6.1.52|KEGG: 00750+2.6.1.52|Reactome: R-HSA-977347 CDA09_04525 82e30cf29cedbf97eb5a0309af6d125f 371 Gene3D G3DSA:3.40.640.10 61 262 2.1E-99 T 01-11-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 CDA09_04525 82e30cf29cedbf97eb5a0309af6d125f 371 SUPERFAMILY SSF53383 20 364 4.52E-71 T 01-11-2018 IPR015424 Pyridoxal phosphate-dependent transferase CDA09_04525 82e30cf29cedbf97eb5a0309af6d125f 371 PIRSF PIRSF000525 11 366 7.7E-92 T 01-11-2018 IPR022278 Phosphoserine aminotransferase GO:0004648|GO:0006564 KEGG: 00260+2.6.1.52|KEGG: 00680+2.6.1.52|KEGG: 00750+2.6.1.52|Reactome: R-HSA-977347 CDA09_04525 82e30cf29cedbf97eb5a0309af6d125f 371 Pfam PF00266 Aminotransferase class-V 56 354 2.4E-22 T 01-11-2018 IPR000192 Aminotransferase class V domain CDA09_04525 82e30cf29cedbf97eb5a0309af6d125f 371 Gene3D G3DSA:3.90.1150.10 263 362 2.1E-99 T 01-11-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 CDA09_15775 4bba09ec4148863e9fe2aaeb76026764 512 Pfam PF04293 SpoVR like protein 17 448 2.0E-173 T 01-11-2018 IPR007390 Sporulation stage V, protein R CDA09_10760 7974e0ce2ff305108f20f626ba4e209d 257 Gene3D G3DSA:3.40.50.850 42 254 1.0E-33 T 01-11-2018 IPR036380 Isochorismatase-like superfamily GO:0003824 CDA09_10760 7974e0ce2ff305108f20f626ba4e209d 257 Pfam PF00857 Isochorismatase family 47 238 7.9E-30 T 01-11-2018 IPR000868 Isochorismatase-like GO:0003824 CDA09_10760 7974e0ce2ff305108f20f626ba4e209d 257 SUPERFAMILY SSF52499 39 250 8.24E-35 T 01-11-2018 IPR036380 Isochorismatase-like superfamily GO:0003824 CDA09_17010 fc7d1a14912c5510886fcdbc6dc7265f 263 SMART SM00822 This enzymatic domain is part of bacterial polyketide synthases and catalyses the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain. It uses NADPH to reduce the keto group to a hydroxy group. 18 198 0.0011 T 01-11-2018 CDA09_17010 fc7d1a14912c5510886fcdbc6dc7265f 263 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 24 259 1.9E-60 T 01-11-2018 CDA09_17010 fc7d1a14912c5510886fcdbc6dc7265f 263 SUPERFAMILY SSF51735 17 260 3.92E-78 T 01-11-2018 IPR036291 NAD(P)-binding domain superfamily CDA09_17010 fc7d1a14912c5510886fcdbc6dc7265f 263 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 147 155 4.4E-14 T 01-11-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CDA09_17010 fc7d1a14912c5510886fcdbc6dc7265f 263 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 167 186 4.4E-14 T 01-11-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CDA09_17010 fc7d1a14912c5510886fcdbc6dc7265f 263 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 93 104 4.4E-14 T 01-11-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CDA09_17010 fc7d1a14912c5510886fcdbc6dc7265f 263 Gene3D G3DSA:3.40.50.720 2 262 5.8E-79 T 01-11-2018 CDA09_17010 fc7d1a14912c5510886fcdbc6dc7265f 263 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 222 242 6.6E-38 T 01-11-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CDA09_17010 fc7d1a14912c5510886fcdbc6dc7265f 263 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 141 157 6.6E-38 T 01-11-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CDA09_17010 fc7d1a14912c5510886fcdbc6dc7265f 263 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 19 36 6.6E-38 T 01-11-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CDA09_17010 fc7d1a14912c5510886fcdbc6dc7265f 263 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 93 104 6.6E-38 T 01-11-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CDA09_17010 fc7d1a14912c5510886fcdbc6dc7265f 263 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 167 186 6.6E-38 T 01-11-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CDA09_17010 fc7d1a14912c5510886fcdbc6dc7265f 263 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 188 205 6.6E-38 T 01-11-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CDA09_17010 fc7d1a14912c5510886fcdbc6dc7265f 263 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 154 182 - T 01-11-2018 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 CDA09_18950 9be93ac789e7406883b40b9ba7f6c019 277 TIGRFAM TIGR01352 tonB_Cterm: TonB family C-terminal domain 198 274 8.4E-21 T 01-11-2018 IPR006260 TonB/TolA, C-terminal CDA09_18950 9be93ac789e7406883b40b9ba7f6c019 277 Gene3D G3DSA:3.30.1150.10 144 276 2.1E-22 T 01-11-2018 CDA09_18950 9be93ac789e7406883b40b9ba7f6c019 277 PRINTS PR01217 Proline rich extensin signature 34 50 2.0E-9 T 01-11-2018 CDA09_18950 9be93ac789e7406883b40b9ba7f6c019 277 PRINTS PR01217 Proline rich extensin signature 119 136 2.0E-9 T 01-11-2018 CDA09_18950 9be93ac789e7406883b40b9ba7f6c019 277 PRINTS PR01217 Proline rich extensin signature 78 99 2.0E-9 T 01-11-2018 CDA09_18950 9be93ac789e7406883b40b9ba7f6c019 277 PRINTS PR01217 Proline rich extensin signature 141 166 2.0E-9 T 01-11-2018 CDA09_18950 9be93ac789e7406883b40b9ba7f6c019 277 PRINTS PR01217 Proline rich extensin signature 15 27 2.0E-9 T 01-11-2018 CDA09_18950 9be93ac789e7406883b40b9ba7f6c019 277 PRINTS PR01217 Proline rich extensin signature 101 117 2.0E-9 T 01-11-2018 CDA09_18950 9be93ac789e7406883b40b9ba7f6c019 277 SUPERFAMILY SSF74653 191 272 7.72E-23 T 01-11-2018 CDA09_18950 9be93ac789e7406883b40b9ba7f6c019 277 Pfam PF03544 Gram-negative bacterial TonB protein C-terminal 196 274 5.9E-22 T 01-11-2018 IPR037682 TonB, C-terminal GO:0055085 CDA09_10705 f4016082bbc7e11eccac37d3f17c9e54 81 Pfam PF02389 Cornifin (SPRR) family 18 79 1.6E-5 T 01-11-2018 CDA09_13400 fdffc39408a03762324e9d96a78e30f3 395 SUPERFAMILY SSF53901 4 239 2.48E-38 T 01-11-2018 IPR016039 Thiolase-like GO:0003824 CDA09_13400 fdffc39408a03762324e9d96a78e30f3 395 ProSitePatterns PS00606 Beta-ketoacyl synthases active site. 153 169 - T 01-11-2018 IPR018201 Beta-ketoacyl synthase, active site CDA09_13400 fdffc39408a03762324e9d96a78e30f3 395 Pfam PF02801 Beta-ketoacyl synthase, C-terminal domain 246 351 4.1E-29 T 01-11-2018 IPR014031 Beta-ketoacyl synthase, C-terminal CDA09_13400 fdffc39408a03762324e9d96a78e30f3 395 SUPERFAMILY SSF53901 206 394 4.66E-52 T 01-11-2018 IPR016039 Thiolase-like GO:0003824 CDA09_13400 fdffc39408a03762324e9d96a78e30f3 395 Gene3D G3DSA:3.40.47.10 6 244 5.8E-34 T 01-11-2018 IPR016039 Thiolase-like GO:0003824 CDA09_13400 fdffc39408a03762324e9d96a78e30f3 395 SMART SM00825 Beta-ketoacyl synthase 27 395 5.2E-9 T 01-11-2018 IPR020841 Polyketide synthase, beta-ketoacyl synthase domain CDA09_13400 fdffc39408a03762324e9d96a78e30f3 395 Pfam PF00109 Beta-ketoacyl synthase, N-terminal domain 80 238 7.7E-25 T 01-11-2018 IPR014030 Beta-ketoacyl synthase, N-terminal CDA09_13400 fdffc39408a03762324e9d96a78e30f3 395 Gene3D G3DSA:3.40.47.10 249 390 7.0E-44 T 01-11-2018 IPR016039 Thiolase-like GO:0003824 CDA09_01820 6bdcc86b1965cfb216e7218d434598da 118 Pfam PF03091 CutA1 divalent ion tolerance protein 6 102 1.3E-33 T 01-11-2018 IPR004323 Divalent ion tolerance protein, CutA GO:0010038 CDA09_01820 6bdcc86b1965cfb216e7218d434598da 118 SUPERFAMILY SSF54913 2 104 2.0E-36 T 01-11-2018 IPR011322 Nitrogen regulatory PII-like, alpha/beta CDA09_01820 6bdcc86b1965cfb216e7218d434598da 118 Gene3D G3DSA:3.30.70.120 1 111 4.2E-37 T 01-11-2018 IPR015867 Nitrogen regulatory protein PII/ATP phosphoribosyltransferase, C-terminal CDA09_18860 17d62303527ce89cddcf99e42a9d39ea 252 SMART SM00382 32 212 2.0E-12 T 01-11-2018 IPR003593 AAA+ ATPase domain CDA09_18860 17d62303527ce89cddcf99e42a9d39ea 252 ProSitePatterns PS00211 ABC transporters family signature. 136 150 - T 01-11-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 CDA09_18860 17d62303527ce89cddcf99e42a9d39ea 252 Gene3D G3DSA:3.40.50.300 5 239 4.8E-55 T 01-11-2018 CDA09_18860 17d62303527ce89cddcf99e42a9d39ea 252 Pfam PF00005 ABC transporter 24 164 2.1E-26 T 01-11-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 CDA09_18860 17d62303527ce89cddcf99e42a9d39ea 252 SUPERFAMILY SSF52540 5 234 3.37E-49 T 01-11-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CDA09_00210 b0b29230b63daadfebc2a6fd53f0f337 306 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 8 63 5.5E-19 T 01-11-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 CDA09_00210 b0b29230b63daadfebc2a6fd53f0f337 306 SUPERFAMILY SSF53850 90 298 3.8E-45 T 01-11-2018 CDA09_00210 b0b29230b63daadfebc2a6fd53f0f337 306 Gene3D G3DSA:3.40.190.290 91 293 1.3E-60 T 01-11-2018 CDA09_00210 b0b29230b63daadfebc2a6fd53f0f337 306 SUPERFAMILY SSF46785 7 112 9.85E-21 T 01-11-2018 IPR036390 Winged helix DNA-binding domain superfamily CDA09_00210 b0b29230b63daadfebc2a6fd53f0f337 306 Pfam PF03466 LysR substrate binding domain 89 293 7.1E-44 T 01-11-2018 IPR005119 LysR, substrate-binding CDA09_00210 b0b29230b63daadfebc2a6fd53f0f337 306 Gene3D G3DSA:1.10.10.10 4 87 9.3E-24 T 01-11-2018 IPR036388 Winged helix-like DNA-binding domain superfamily CDA09_01405 6c017d85c16ba2848cdeafd6915d426e 169 SUPERFAMILY SSF48452 32 142 4.98E-21 T 01-11-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 CDA09_01405 6c017d85c16ba2848cdeafd6915d426e 169 Gene3D G3DSA:1.25.40.10 25 156 1.8E-22 T 01-11-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 CDA09_01405 6c017d85c16ba2848cdeafd6915d426e 169 SMART SM00028 103 136 240.0 T 01-11-2018 IPR019734 Tetratricopeptide repeat GO:0005515 CDA09_01405 6c017d85c16ba2848cdeafd6915d426e 169 SMART SM00028 35 68 0.13 T 01-11-2018 IPR019734 Tetratricopeptide repeat GO:0005515 CDA09_01405 6c017d85c16ba2848cdeafd6915d426e 169 SMART SM00028 69 102 0.016 T 01-11-2018 IPR019734 Tetratricopeptide repeat GO:0005515 CDA09_01405 6c017d85c16ba2848cdeafd6915d426e 169 Pfam PF13174 Tetratricopeptide repeat 105 134 0.2 T 01-11-2018 IPR019734 Tetratricopeptide repeat GO:0005515 CDA09_01405 6c017d85c16ba2848cdeafd6915d426e 169 Pfam PF13174 Tetratricopeptide repeat 37 67 0.13 T 01-11-2018 IPR019734 Tetratricopeptide repeat GO:0005515 CDA09_02025 60c3e1f8c090d5ecfa7681f8816f1f7e 670 Gene3D G3DSA:1.50.10.10 406 638 8.5E-6 T 01-11-2018 IPR012341 Six-hairpin glycosidase-like superfamily GO:0003824 CDA09_02025 60c3e1f8c090d5ecfa7681f8816f1f7e 670 SUPERFAMILY SSF48208 378 618 2.45E-12 T 01-11-2018 IPR008928 Six-hairpin glycosidase superfamily GO:0003824 CDA09_06445 a44ab0bbd90a0a6c7e7e008f8c31a60d 422 Pfam PF13660 Domain of unknown function (DUF4147) 11 231 5.0E-86 T 01-11-2018 IPR025286 MOFRL-associated domain Reactome: R-HSA-70350 CDA09_06445 a44ab0bbd90a0a6c7e7e008f8c31a60d 422 Pfam PF05161 MOFRL family 310 415 8.8E-36 T 01-11-2018 IPR007835 MOFRL domain Reactome: R-HSA-70350 CDA09_06445 a44ab0bbd90a0a6c7e7e008f8c31a60d 422 SUPERFAMILY SSF82544 6 421 6.8E-155 T 01-11-2018 CDA09_06445 a44ab0bbd90a0a6c7e7e008f8c31a60d 422 Gene3D G3DSA:3.40.50.10180 35 254 2.2E-140 T 01-11-2018 IPR038614 Glycerate kinase, N-terminal domain superfamily Reactome: R-HSA-70350 CDA09_06445 a44ab0bbd90a0a6c7e7e008f8c31a60d 422 Gene3D G3DSA:3.40.1480.10 255 416 2.2E-140 T 01-11-2018 IPR037035 Glycerate kinase-like, C-terminal domain superfamily CDA09_21530 d1aadbe863714a9e579d29df0ef0402d 382 Pfam PF12698 ABC-2 family transporter protein 30 373 1.5E-29 T 01-11-2018 CDA09_09240 89886ce9a72c42bab167e479320a47f7 391 Gene3D G3DSA:1.20.1270.370 13 223 2.2E-56 T 01-11-2018 CDA09_09240 89886ce9a72c42bab167e479320a47f7 391 Gene3D G3DSA:3.40.50.11900 234 389 1.3E-44 T 01-11-2018 CDA09_09240 89886ce9a72c42bab167e479320a47f7 391 Pfam PF06050 2-hydroxyglutaryl-CoA dehydratase, D-component 41 380 5.1E-52 T 01-11-2018 IPR010327 FldB/FldC dehydratase alpha/beta subunit CDA09_09240 89886ce9a72c42bab167e479320a47f7 391 Gene3D G3DSA:3.40.50.11890 32 157 2.2E-56 T 01-11-2018 CDA09_12065 b25a0d9e7a708ec13510c65bd8ae0987 238 SMART SM00382 30 214 5.7E-10 T 01-11-2018 IPR003593 AAA+ ATPase domain CDA09_12065 b25a0d9e7a708ec13510c65bd8ae0987 238 Gene3D G3DSA:3.40.50.300 1 238 7.4E-58 T 01-11-2018 CDA09_12065 b25a0d9e7a708ec13510c65bd8ae0987 238 SUPERFAMILY SSF52540 4 233 1.2E-56 T 01-11-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CDA09_12065 b25a0d9e7a708ec13510c65bd8ae0987 238 Pfam PF00005 ABC transporter 21 165 4.4E-32 T 01-11-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 CDA09_12065 b25a0d9e7a708ec13510c65bd8ae0987 238 ProSitePatterns PS00211 ABC transporters family signature. 138 152 - T 01-11-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 CDA09_01960 804b36721dc1a621349f947aeda618c8 248 Pfam PF03741 Integral membrane protein TerC family 16 186 2.4E-47 T 01-11-2018 IPR005496 Integral membrane protein TerC GO:0016021 CDA09_01960 804b36721dc1a621349f947aeda618c8 248 TIGRFAM TIGR03717 R_switched_YjbE: integral membrane protein, YjbE family 14 188 2.9E-76 T 01-11-2018 IPR022301 Integral membrane protein YjbE CDA09_10710 b413959ebd3dd550d0461ec3f67b7ab1 140 SUPERFAMILY SSF46955 8 128 9.52E-29 T 01-11-2018 IPR009061 Putative DNA-binding domain superfamily CDA09_10710 b413959ebd3dd550d0461ec3f67b7ab1 140 SMART SM00422 8 77 3.5E-29 T 01-11-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 CDA09_10710 b413959ebd3dd550d0461ec3f67b7ab1 140 Pfam PF09278 MerR, DNA binding 52 113 7.2E-16 T 01-11-2018 IPR015358 Transcription regulator MerR, DNA binding CDA09_10710 b413959ebd3dd550d0461ec3f67b7ab1 140 PRINTS PR00040 MerR bacterial regulatory protein HTH signature 9 20 3.5E-23 T 01-11-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 CDA09_10710 b413959ebd3dd550d0461ec3f67b7ab1 140 PRINTS PR00040 MerR bacterial regulatory protein HTH signature 44 64 3.5E-23 T 01-11-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 CDA09_10710 b413959ebd3dd550d0461ec3f67b7ab1 140 PRINTS PR00040 MerR bacterial regulatory protein HTH signature 20 33 3.5E-23 T 01-11-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 CDA09_10710 b413959ebd3dd550d0461ec3f67b7ab1 140 Gene3D G3DSA:1.10.1660.10 1 131 2.3E-30 T 01-11-2018 CDA09_10710 b413959ebd3dd550d0461ec3f67b7ab1 140 Pfam PF00376 MerR family regulatory protein 9 46 9.3E-13 T 01-11-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 CDA09_10710 b413959ebd3dd550d0461ec3f67b7ab1 140 ProSitePatterns PS00552 MerR-type HTH domain signature. 11 33 - T 01-11-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 CDA09_10710 b413959ebd3dd550d0461ec3f67b7ab1 140 TIGRFAM TIGR02051 MerR: Hg(II)-responsive transcriptional regulator 9 132 3.6E-49 T 01-11-2018 IPR011794 Hg(II)-responsive transcriptional regulator GO:0003677|GO:0006355|GO:0045340|GO:0046689 CDA09_17060 0b3c206cb5570ddb18eed74f38a4f150 265 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 30 262 4.6E-59 T 01-11-2018 CDA09_17060 0b3c206cb5570ddb18eed74f38a4f150 265 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 142 158 1.5E-35 T 01-11-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CDA09_17060 0b3c206cb5570ddb18eed74f38a4f150 265 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 193 210 1.5E-35 T 01-11-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CDA09_17060 0b3c206cb5570ddb18eed74f38a4f150 265 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 95 106 1.5E-35 T 01-11-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CDA09_17060 0b3c206cb5570ddb18eed74f38a4f150 265 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 20 37 1.5E-35 T 01-11-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CDA09_17060 0b3c206cb5570ddb18eed74f38a4f150 265 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 226 246 1.5E-35 T 01-11-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CDA09_17060 0b3c206cb5570ddb18eed74f38a4f150 265 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 172 191 1.5E-35 T 01-11-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CDA09_17060 0b3c206cb5570ddb18eed74f38a4f150 265 Gene3D G3DSA:3.40.50.720 7 265 1.5E-79 T 01-11-2018 CDA09_17060 0b3c206cb5570ddb18eed74f38a4f150 265 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 95 106 1.6E-10 T 01-11-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CDA09_17060 0b3c206cb5570ddb18eed74f38a4f150 265 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 148 156 1.6E-10 T 01-11-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CDA09_17060 0b3c206cb5570ddb18eed74f38a4f150 265 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 172 191 1.6E-10 T 01-11-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CDA09_17060 0b3c206cb5570ddb18eed74f38a4f150 265 SUPERFAMILY SSF51735 17 264 1.45E-78 T 01-11-2018 IPR036291 NAD(P)-binding domain superfamily CDA09_15510 9a78f627ec77a73c067263f056e79abc 918 Gene3D G3DSA:3.40.50.740 8 899 7.3E-105 T 01-11-2018 CDA09_15510 9a78f627ec77a73c067263f056e79abc 918 Pfam PF01568 Molydopterin dinucleotide binding domain 811 864 3.3E-9 T 01-11-2018 IPR006657 Molybdopterin dinucleotide-binding domain GO:0016491|GO:0043546|GO:0055114 CDA09_15510 9a78f627ec77a73c067263f056e79abc 918 Pfam PF00384 Molybdopterin oxidoreductase 344 630 5.0E-9 T 01-11-2018 IPR006656 Molybdopterin oxidoreductase GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 CDA09_15510 9a78f627ec77a73c067263f056e79abc 918 Pfam PF00384 Molybdopterin oxidoreductase 71 263 7.7E-14 T 01-11-2018 IPR006656 Molybdopterin oxidoreductase GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 CDA09_15510 9a78f627ec77a73c067263f056e79abc 918 SUPERFAMILY SSF50692 781 912 3.32E-15 T 01-11-2018 IPR009010 Aspartate decarboxylase-like domain superfamily CDA09_15510 9a78f627ec77a73c067263f056e79abc 918 SUPERFAMILY SSF53706 11 623 1.45E-121 T 01-11-2018 CDA09_13335 1f8694bb77a1c971b398502f0d780af0 280 SUPERFAMILY SSF52540 7 264 2.07E-37 T 01-11-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CDA09_13335 1f8694bb77a1c971b398502f0d780af0 280 Pfam PF00004 ATPase family associated with various cellular activities (AAA) 29 175 2.3E-14 T 01-11-2018 IPR003959 ATPase, AAA-type, core GO:0005524 CDA09_13335 1f8694bb77a1c971b398502f0d780af0 280 SMART SM00382 25 183 3.2E-8 T 01-11-2018 IPR003593 AAA+ ATPase domain CDA09_13335 1f8694bb77a1c971b398502f0d780af0 280 Gene3D G3DSA:3.40.50.300 11 190 5.9E-28 T 01-11-2018 CDA09_03170 a0e8f0302c8fd7b3b7e5685eec81ed3d 301 Pfam PF03466 LysR substrate binding domain 90 282 1.3E-30 T 01-11-2018 IPR005119 LysR, substrate-binding CDA09_03170 a0e8f0302c8fd7b3b7e5685eec81ed3d 301 SUPERFAMILY SSF53850 90 285 5.12E-29 T 01-11-2018 CDA09_03170 a0e8f0302c8fd7b3b7e5685eec81ed3d 301 Gene3D G3DSA:3.40.190.10 163 256 7.8E-54 T 01-11-2018 CDA09_03170 a0e8f0302c8fd7b3b7e5685eec81ed3d 301 Gene3D G3DSA:1.10.10.10 2 86 8.5E-24 T 01-11-2018 IPR036388 Winged helix-like DNA-binding domain superfamily CDA09_03170 a0e8f0302c8fd7b3b7e5685eec81ed3d 301 Gene3D G3DSA:3.40.190.10 96 262 7.8E-54 T 01-11-2018 CDA09_03170 a0e8f0302c8fd7b3b7e5685eec81ed3d 301 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 7 64 4.6E-20 T 01-11-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 CDA09_03170 a0e8f0302c8fd7b3b7e5685eec81ed3d 301 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 32 42 1.8E-6 T 01-11-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 CDA09_03170 a0e8f0302c8fd7b3b7e5685eec81ed3d 301 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 21 32 1.8E-6 T 01-11-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 CDA09_03170 a0e8f0302c8fd7b3b7e5685eec81ed3d 301 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 42 53 1.8E-6 T 01-11-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 CDA09_03170 a0e8f0302c8fd7b3b7e5685eec81ed3d 301 SUPERFAMILY SSF46785 6 111 3.54E-23 T 01-11-2018 IPR036390 Winged helix DNA-binding domain superfamily CDA09_08445 18994c7537d4f3e6748f916101fea7b0 301 Pfam PF03631 Virulence factor BrkB 22 275 7.5E-52 T 01-11-2018 IPR017039 Virulence factor BrkB CDA09_08445 18994c7537d4f3e6748f916101fea7b0 301 TIGRFAM TIGR00765 yihY_not_rbn: YihY family inner membrane protein 16 273 3.7E-26 T 01-11-2018 IPR017039 Virulence factor BrkB CDA09_08445 18994c7537d4f3e6748f916101fea7b0 301 PIRSF PIRSF035875 1 297 6.1E-60 T 01-11-2018 IPR017039 Virulence factor BrkB CDA09_16735 b448d387aca9e1debcac2b43d9ac6387 213 Hamap MF_00240 Outer-membrane lipoprotein carrier protein [lolA]. 16 213 29.094 T 01-11-2018 IPR018323 Outer membrane lipoprotein carrier protein LolA, Proteobacteria GO:0042597|GO:0042953|GO:0042954 CDA09_16735 b448d387aca9e1debcac2b43d9ac6387 213 SUPERFAMILY SSF89392 32 212 4.71E-47 T 01-11-2018 IPR029046 Lipoprotein localisation LolA/LolB/LppX CDA09_16735 b448d387aca9e1debcac2b43d9ac6387 213 Gene3D G3DSA:2.50.20.10 31 212 7.6E-54 T 01-11-2018 CDA09_16735 b448d387aca9e1debcac2b43d9ac6387 213 Pfam PF03548 Outer membrane lipoprotein carrier protein LolA 41 202 5.7E-46 T 01-11-2018 IPR004564 Outer membrane lipoprotein carrier protein LolA-like CDA09_16735 b448d387aca9e1debcac2b43d9ac6387 213 TIGRFAM TIGR00547 lolA: outer membrane lipoprotein carrier protein LolA 17 210 1.1E-19 T 01-11-2018 IPR018323 Outer membrane lipoprotein carrier protein LolA, Proteobacteria GO:0042597|GO:0042953|GO:0042954 CDA09_10040 ec9811ad62ae61d7ef59284cd0941720 802 Gene3D G3DSA:3.90.1170.50 49 143 5.0E-98 T 01-11-2018 CDA09_10040 ec9811ad62ae61d7ef59284cd0941720 802 SUPERFAMILY SSF56003 135 799 6.93E-158 T 01-11-2018 IPR037165 Aldehyde oxidase/xanthine dehydrogenase, molybdopterin binding domain superfamily GO:0016491|GO:0055114 CDA09_10040 ec9811ad62ae61d7ef59284cd0941720 802 Gene3D G3DSA:3.30.365.10 382 776 9.3E-118 T 01-11-2018 CDA09_10040 ec9811ad62ae61d7ef59284cd0941720 802 Gene3D G3DSA:3.30.365.10 470 651 9.3E-118 T 01-11-2018 CDA09_10040 ec9811ad62ae61d7ef59284cd0941720 802 SUPERFAMILY SSF54665 17 163 1.7E-40 T 01-11-2018 IPR036856 Aldehyde oxidase/xanthine dehydrogenase, a/b hammerhead superfamily CDA09_10040 ec9811ad62ae61d7ef59284cd0941720 802 Pfam PF01315 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain 35 141 2.3E-24 T 01-11-2018 IPR000674 Aldehyde oxidase/xanthine dehydrogenase, a/b hammerhead CDA09_10040 ec9811ad62ae61d7ef59284cd0941720 802 Gene3D G3DSA:3.30.365.10 33 296 5.0E-98 T 01-11-2018 CDA09_10040 ec9811ad62ae61d7ef59284cd0941720 802 Pfam PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase 161 736 3.6E-135 T 01-11-2018 IPR008274 Aldehyde oxidase/xanthine dehydrogenase, molybdopterin binding GO:0016491|GO:0055114 CDA09_10040 ec9811ad62ae61d7ef59284cd0941720 802 Gene3D G3DSA:3.30.365.10 144 373 5.0E-98 T 01-11-2018 CDA09_10040 ec9811ad62ae61d7ef59284cd0941720 802 SMART SM01008 34 143 1.1E-42 T 01-11-2018 IPR000674 Aldehyde oxidase/xanthine dehydrogenase, a/b hammerhead CDA09_00755 040e204eac14a7eeeca70aeb7dee707f 253 Pfam PF12399 Branched-chain amino acid ATP-binding cassette transporter 226 248 2.9E-14 T 01-11-2018 IPR032823 Branched-chain amino acid ATP-binding cassette transporter, C-terminal CDA09_00755 040e204eac14a7eeeca70aeb7dee707f 253 Pfam PF00005 ABC transporter 17 178 1.3E-29 T 01-11-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 CDA09_00755 040e204eac14a7eeeca70aeb7dee707f 253 SUPERFAMILY SSF52540 2 249 2.72E-67 T 01-11-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CDA09_00755 040e204eac14a7eeeca70aeb7dee707f 253 Gene3D G3DSA:3.40.50.300 1 251 1.8E-66 T 01-11-2018 CDA09_00755 040e204eac14a7eeeca70aeb7dee707f 253 ProSitePatterns PS00211 ABC transporters family signature. 150 164 - T 01-11-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 CDA09_00755 040e204eac14a7eeeca70aeb7dee707f 253 SMART SM00382 26 234 6.2E-4 T 01-11-2018 IPR003593 AAA+ ATPase domain CDA09_05300 c2776f204961ecc4935cfed05575d5cc 468 SUPERFAMILY SSF52096 36 385 1.08E-78 T 01-11-2018 IPR029045 ClpP/crotonase-like domain superfamily CDA09_05300 c2776f204961ecc4935cfed05575d5cc 468 Gene3D G3DSA:2.30.42.10 101 188 2.1E-92 T 01-11-2018 CDA09_05300 c2776f204961ecc4935cfed05575d5cc 468 SUPERFAMILY SSF50156 90 184 9.26E-20 T 01-11-2018 IPR036034 PDZ superfamily GO:0005515 CDA09_05300 c2776f204961ecc4935cfed05575d5cc 468 SMART SM00228 101 172 9.4E-16 T 01-11-2018 IPR001478 PDZ domain GO:0005515 CDA09_05300 c2776f204961ecc4935cfed05575d5cc 468 Pfam PF13180 PDZ domain 101 181 1.2E-12 T 01-11-2018 IPR001478 PDZ domain GO:0005515 CDA09_05300 c2776f204961ecc4935cfed05575d5cc 468 Pfam PF03572 Peptidase family S41 200 379 3.8E-56 T 01-11-2018 IPR005151 Tail specific protease GO:0006508|GO:0008236 Reactome: R-HSA-2187335|Reactome: R-HSA-2453902 CDA09_05300 c2776f204961ecc4935cfed05575d5cc 468 Gene3D G3DSA:3.90.226.10 189 377 2.1E-92 T 01-11-2018 CDA09_05300 c2776f204961ecc4935cfed05575d5cc 468 Gene3D G3DSA:3.30.750.44 47 355 2.1E-92 T 01-11-2018 CDA09_05300 c2776f204961ecc4935cfed05575d5cc 468 SMART SM00245 174 380 1.1E-66 T 01-11-2018 IPR005151 Tail specific protease GO:0006508|GO:0008236 Reactome: R-HSA-2187335|Reactome: R-HSA-2453902 CDA09_05300 c2776f204961ecc4935cfed05575d5cc 468 TIGRFAM TIGR00225 prc: C-terminal processing peptidase 54 384 1.8E-100 T 01-11-2018 IPR004447 C-terminal-processing peptidase S41A GO:0006508|GO:0008236 CDA09_10360 b349242e59d9c7b028857f7966a77613 559 Pfam PF02830 V4R domain 122 183 2.4E-12 T 01-11-2018 IPR004096 4-vinyl reductase, 4VR CDA09_10360 b349242e59d9c7b028857f7966a77613 559 SUPERFAMILY SSF111126 38 178 3.09E-11 T 01-11-2018 IPR024096 NO signalling/Golgi transport ligand-binding domain superfamily CDA09_10360 b349242e59d9c7b028857f7966a77613 559 ProSitePatterns PS00688 Sigma-54 interaction domain C-terminal part signature. 443 452 - T 01-11-2018 IPR025944 Sigma-54 interaction domain, conserved site CDA09_10360 b349242e59d9c7b028857f7966a77613 559 Gene3D G3DSA:3.30.1380.20 28 187 2.2E-5 T 01-11-2018 CDA09_10360 b349242e59d9c7b028857f7966a77613 559 Pfam PF06505 Activator of aromatic catabolism 10 110 2.4E-33 T 01-11-2018 IPR010523 Activator of aromatic catabolism CDA09_10360 b349242e59d9c7b028857f7966a77613 559 Pfam PF02954 Bacterial regulatory protein, Fis family 516 553 7.8E-12 T 01-11-2018 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 CDA09_10360 b349242e59d9c7b028857f7966a77613 559 SMART SM00382 250 393 7.2E-11 T 01-11-2018 IPR003593 AAA+ ATPase domain CDA09_10360 b349242e59d9c7b028857f7966a77613 559 PRINTS PR01590 FIS bacterial regulatory protein HTH signature 537 557 2.7E-8 T 01-11-2018 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 CDA09_10360 b349242e59d9c7b028857f7966a77613 559 PRINTS PR01590 FIS bacterial regulatory protein HTH signature 520 537 2.7E-8 T 01-11-2018 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 CDA09_10360 b349242e59d9c7b028857f7966a77613 559 Gene3D G3DSA:3.40.50.300 219 400 2.0E-66 T 01-11-2018 CDA09_10360 b349242e59d9c7b028857f7966a77613 559 ProDom PD485437 REGULATOR TRANSCRIPTIONAL FIS-TYPE HELIX-TURN-HELIX ACTIVATOR PLASMID FAMILY PHENOL-DEGRADATIVE FIS SIGMA-54 28 136 3.0E-39 T 01-11-2018 IPR010523 Activator of aromatic catabolism CDA09_10360 b349242e59d9c7b028857f7966a77613 559 Gene3D G3DSA:1.10.8.60 401 478 8.4E-24 T 01-11-2018 CDA09_10360 b349242e59d9c7b028857f7966a77613 559 Gene3D G3DSA:1.10.10.60 497 554 1.0E-9 T 01-11-2018 CDA09_10360 b349242e59d9c7b028857f7966a77613 559 SUPERFAMILY SSF46689 443 553 6.27E-9 T 01-11-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 CDA09_10360 b349242e59d9c7b028857f7966a77613 559 SUPERFAMILY SSF52540 230 472 4.05E-70 T 01-11-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CDA09_10360 b349242e59d9c7b028857f7966a77613 559 SMART SM00989 121 183 8.2E-23 T 01-11-2018 IPR004096 4-vinyl reductase, 4VR CDA09_10360 b349242e59d9c7b028857f7966a77613 559 ProSitePatterns PS00675 Sigma-54 interaction domain ATP-binding region A signature. 254 267 - T 01-11-2018 IPR025662 Sigma-54 interaction domain, ATP-binding site 1 CDA09_10360 b349242e59d9c7b028857f7966a77613 559 ProSitePatterns PS00676 Sigma-54 interaction domain ATP-binding region B signature. 316 331 - T 01-11-2018 IPR025943 Sigma-54 interaction domain, ATP-binding site 2 CDA09_10360 b349242e59d9c7b028857f7966a77613 559 Pfam PF00158 Sigma-54 interaction domain 230 396 1.6E-69 T 01-11-2018 IPR002078 RNA polymerase sigma factor 54 interaction domain GO:0005524|GO:0006355|GO:0008134 CDA09_12675 0ae3d99f5063dece29faf79920c56673 394 TIGRFAM TIGR01730 RND_mfp: efflux transporter, RND family, MFP subunit 37 385 1.7E-42 T 01-11-2018 IPR006143 RND efflux pump, membrane fusion protein GO:0005215|GO:0016020|GO:0055085 CDA09_12675 0ae3d99f5063dece29faf79920c56673 394 SUPERFAMILY SSF111369 54 308 1.7E-10 T 01-11-2018 CDA09_12675 0ae3d99f5063dece29faf79920c56673 394 Gene3D G3DSA:2.40.30.170 50 311 5.0E-58 T 01-11-2018 CDA09_12675 0ae3d99f5063dece29faf79920c56673 394 Gene3D G3DSA:2.40.50.100 61 235 5.0E-58 T 01-11-2018 CDA09_12675 0ae3d99f5063dece29faf79920c56673 394 Gene3D G3DSA:1.10.287.470 95 200 5.0E-58 T 01-11-2018 CDA09_12675 0ae3d99f5063dece29faf79920c56673 394 Pfam PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion 56 294 7.9E-16 T 01-11-2018 IPR032317 RND efflux pump, membrane fusion protein, barrel-sandwich domain CDA09_12675 0ae3d99f5063dece29faf79920c56673 394 Gene3D G3DSA:2.40.420.20 47 371 5.0E-58 T 01-11-2018 CDA09_18980 f4b58ef3e7ff35a96e6867c263e27bc2 181 Pfam PF10634 Fe2+ transport protein 23 174 5.8E-68 T 01-11-2018 IPR018470 Periplasmic metal-binding protein Tp34-type CDA09_18980 f4b58ef3e7ff35a96e6867c263e27bc2 181 Gene3D G3DSA:2.60.40.2480 22 181 9.0E-70 T 01-11-2018 IPR038482 Periplasmic metal-binding protein tp34-type superfamily CDA09_18980 f4b58ef3e7ff35a96e6867c263e27bc2 181 PIRSF PIRSF017018 2 181 5.9E-82 T 01-11-2018 IPR018470 Periplasmic metal-binding protein Tp34-type CDA09_09150 b464c511c528bf27dc335cd1317921e3 313 SMART SM00893 3 181 4.6E-51 T 01-11-2018 IPR014730 Electron transfer flavoprotein, alpha/beta-subunit, N-terminal Reactome: R-HSA-611105 CDA09_09150 b464c511c528bf27dc335cd1317921e3 313 Gene3D G3DSA:3.40.50.620 2 182 3.0E-52 T 01-11-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold CDA09_09150 b464c511c528bf27dc335cd1317921e3 313 Pfam PF01012 Electron transfer flavoprotein domain 4 169 1.3E-37 T 01-11-2018 IPR014730 Electron transfer flavoprotein, alpha/beta-subunit, N-terminal Reactome: R-HSA-611105 CDA09_09150 b464c511c528bf27dc335cd1317921e3 313 PIRSF PIRSF000089 1 312 1.8E-105 T 01-11-2018 IPR001308 Electron transfer flavoprotein alpha subunit/FixB GO:0009055|GO:0050660 Reactome: R-HSA-611105 CDA09_09150 b464c511c528bf27dc335cd1317921e3 313 SUPERFAMILY SSF52467 188 308 9.27E-47 T 01-11-2018 IPR029035 DHS-like NAD/FAD-binding domain superfamily CDA09_09150 b464c511c528bf27dc335cd1317921e3 313 Gene3D G3DSA:3.40.50.1220 183 311 4.7E-57 T 01-11-2018 CDA09_09150 b464c511c528bf27dc335cd1317921e3 313 ProSitePatterns PS00696 Electron transfer flavoprotein alpha-subunit signature. 253 279 - T 01-11-2018 IPR018206 Electron transfer flavoprotein subunit alpha, conserved site Reactome: R-HSA-611105 CDA09_09150 b464c511c528bf27dc335cd1317921e3 313 SUPERFAMILY SSF52402 3 183 1.19E-52 T 01-11-2018 CDA09_09150 b464c511c528bf27dc335cd1317921e3 313 Pfam PF00766 Electron transfer flavoprotein FAD-binding domain 189 272 8.2E-35 T 01-11-2018 IPR014731 Electron transfer flavoprotein, alpha subunit, C-terminal Reactome: R-HSA-611105 CDA09_12380 b1c78d4a4092efd3f330c7861777d01c 526 Pfam PF01384 Phosphate transporter family 63 514 3.2E-99 T 01-11-2018 IPR001204 Phosphate transporter GO:0005315|GO:0006817|GO:0016020 Reactome: R-HSA-427652 CDA09_00455 878d65fc24b80120e35b3c635d887250 286 SMART SM00470 30 120 4.4E-37 T 01-11-2018 IPR003115 ParB/Sulfiredoxin CDA09_00455 878d65fc24b80120e35b3c635d887250 286 Gene3D G3DSA:3.90.1530.30 43 106 2.3E-28 T 01-11-2018 CDA09_00455 878d65fc24b80120e35b3c635d887250 286 Gene3D G3DSA:1.10.10.2830 107 220 1.4E-36 T 01-11-2018 CDA09_00455 878d65fc24b80120e35b3c635d887250 286 SUPERFAMILY SSF109709 112 220 2.38E-34 T 01-11-2018 CDA09_00455 878d65fc24b80120e35b3c635d887250 286 Pfam PF02195 ParB-like nuclease domain 33 120 4.0E-29 T 01-11-2018 IPR003115 ParB/Sulfiredoxin CDA09_00455 878d65fc24b80120e35b3c635d887250 286 TIGRFAM TIGR00180 parB_part: ParB/RepB/Spo0J family partition protein 27 204 1.4E-57 T 01-11-2018 IPR004437 ParB/RepB/Spo0J partition protein family GO:0003677 CDA09_00455 878d65fc24b80120e35b3c635d887250 286 SUPERFAMILY SSF110849 31 122 1.94E-29 T 01-11-2018 IPR036086 ParB/Sulfiredoxin superfamily CDA09_01230 e4197ebcfa9940e8ae0170dd90f77117 62 Pfam PF11943 Protein of unknown function (DUF3460) 3 60 1.9E-26 T 01-11-2018 IPR021853 Protein of unknown function DUF3460 CDA09_05285 36d2c8abe947d3eb17f6ecb917cc311b 109 SMART SM00418 21 99 3.6E-23 T 01-11-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 CDA09_05285 36d2c8abe947d3eb17f6ecb917cc311b 109 SUPERFAMILY SSF46785 8 102 6.16E-26 T 01-11-2018 IPR036390 Winged helix DNA-binding domain superfamily CDA09_05285 36d2c8abe947d3eb17f6ecb917cc311b 109 Pfam PF01022 Bacterial regulatory protein, arsR family 28 68 2.1E-13 T 01-11-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 CDA09_05285 36d2c8abe947d3eb17f6ecb917cc311b 109 PRINTS PR00778 Bacterial regulatory protein ArsR family signature 42 53 1.1E-14 T 01-11-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 CDA09_05285 36d2c8abe947d3eb17f6ecb917cc311b 109 PRINTS PR00778 Bacterial regulatory protein ArsR family signature 23 38 1.1E-14 T 01-11-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 CDA09_05285 36d2c8abe947d3eb17f6ecb917cc311b 109 PRINTS PR00778 Bacterial regulatory protein ArsR family signature 70 85 1.1E-14 T 01-11-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 CDA09_05285 36d2c8abe947d3eb17f6ecb917cc311b 109 PRINTS PR00778 Bacterial regulatory protein ArsR family signature 55 70 1.1E-14 T 01-11-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 CDA09_05285 36d2c8abe947d3eb17f6ecb917cc311b 109 Gene3D G3DSA:1.10.10.10 9 106 1.4E-27 T 01-11-2018 IPR036388 Winged helix-like DNA-binding domain superfamily CDA09_13675 69c6c7c516c4b445c60e8286e24336bb 396 Gene3D G3DSA:3.40.47.10 5 395 1.6E-87 T 01-11-2018 IPR016039 Thiolase-like GO:0003824 CDA09_13675 69c6c7c516c4b445c60e8286e24336bb 396 SUPERFAMILY SSF53901 7 242 7.4E-17 T 01-11-2018 IPR016039 Thiolase-like GO:0003824 CDA09_13675 69c6c7c516c4b445c60e8286e24336bb 396 PIRSF PIRSF000429 5 395 1.3E-16 T 01-11-2018 IPR002155 Thiolase GO:0016747 CDA09_13675 69c6c7c516c4b445c60e8286e24336bb 396 SUPERFAMILY SSF53901 251 390 2.57E-14 T 01-11-2018 IPR016039 Thiolase-like GO:0003824 CDA09_11760 7bb37f432a91604c0bf0b222d3a191ee 382 Pfam PF02770 Acyl-CoA dehydrogenase, middle domain 121 216 4.1E-22 T 01-11-2018 IPR006091 Acyl-CoA oxidase/dehydrogenase, central domain GO:0016627|GO:0055114 CDA09_11760 7bb37f432a91604c0bf0b222d3a191ee 382 Pfam PF02771 Acyl-CoA dehydrogenase, N-terminal domain 6 116 3.8E-21 T 01-11-2018 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal GO:0016627|GO:0050660|GO:0055114 CDA09_11760 7bb37f432a91604c0bf0b222d3a191ee 382 Gene3D G3DSA:1.20.140.10 234 381 4.1E-41 T 01-11-2018 CDA09_11760 7bb37f432a91604c0bf0b222d3a191ee 382 Pfam PF00441 Acyl-CoA dehydrogenase, C-terminal domain 228 375 2.7E-42 T 01-11-2018 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal GO:0016627|GO:0055114 CDA09_11760 7bb37f432a91604c0bf0b222d3a191ee 382 Gene3D G3DSA:1.10.540.10 1 118 4.2E-28 T 01-11-2018 IPR037069 Acyl-CoA dehydrogenase/oxidase, N-terminal domain superfamily GO:0016627|GO:0050660|GO:0055114 CDA09_11760 7bb37f432a91604c0bf0b222d3a191ee 382 SUPERFAMILY SSF47203 226 377 8.22E-47 T 01-11-2018 IPR036250 Acyl-CoA dehydrogenase-like, C-terminal GO:0016627|GO:0055114 CDA09_11760 7bb37f432a91604c0bf0b222d3a191ee 382 Gene3D G3DSA:2.40.110.10 120 233 3.6E-38 T 01-11-2018 CDA09_11760 7bb37f432a91604c0bf0b222d3a191ee 382 SUPERFAMILY SSF56645 1 239 8.38E-68 T 01-11-2018 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain superfamily GO:0016627|GO:0055114 CDA09_11760 7bb37f432a91604c0bf0b222d3a191ee 382 TIGRFAM TIGR03207 cyc_hxne_CoA_dh: cyclohexanecarboxyl-CoA dehydrogenase 5 376 4.3E-219 T 01-11-2018 IPR017620 Cyclohexanecarboxyl-CoA dehydrogenase CDA09_05965 8745ac25c19688890f6a536a7528165d 217 ProSitePatterns PS00113 Adenylate kinase signature. 81 92 - T 01-11-2018 IPR033690 Adenylate kinase, conserved site KEGG: 00230+2.7.4.3|KEGG: 00730+2.7.4.3|MetaCyc: PWY-7219|Reactome: R-HSA-499943 CDA09_05965 8745ac25c19688890f6a536a7528165d 217 Hamap MF_00235 Adenylate kinase [adk]. 1 217 53.799 T 01-11-2018 IPR000850 Adenylate kinase/UMP-CMP kinase GO:0005524|GO:0006139|GO:0019205 KEGG: 00230+2.7.4.3|KEGG: 00730+2.7.4.3|MetaCyc: PWY-7219|Reactome: R-HSA-499943 CDA09_05965 8745ac25c19688890f6a536a7528165d 217 SUPERFAMILY SSF52540 1 186 3.37E-44 T 01-11-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CDA09_05965 8745ac25c19688890f6a536a7528165d 217 TIGRFAM TIGR01351 adk: adenylate kinase 2 185 2.8E-74 T 01-11-2018 IPR006259 Adenylate kinase subfamily GO:0004017|GO:0005524|GO:0016776 KEGG: 00230+2.7.4.3|KEGG: 00730+2.7.4.3|MetaCyc: PWY-7219 CDA09_05965 8745ac25c19688890f6a536a7528165d 217 PRINTS PR00094 Adenylate kinase signature 173 187 4.6E-36 T 01-11-2018 IPR000850 Adenylate kinase/UMP-CMP kinase GO:0005524|GO:0006139|GO:0019205 KEGG: 00230+2.7.4.3|KEGG: 00730+2.7.4.3|MetaCyc: PWY-7219|Reactome: R-HSA-499943 CDA09_05965 8745ac25c19688890f6a536a7528165d 217 PRINTS PR00094 Adenylate kinase signature 32 46 4.6E-36 T 01-11-2018 IPR000850 Adenylate kinase/UMP-CMP kinase GO:0005524|GO:0006139|GO:0019205 KEGG: 00230+2.7.4.3|KEGG: 00730+2.7.4.3|MetaCyc: PWY-7219|Reactome: R-HSA-499943 CDA09_05965 8745ac25c19688890f6a536a7528165d 217 PRINTS PR00094 Adenylate kinase signature 81 97 4.6E-36 T 01-11-2018 IPR000850 Adenylate kinase/UMP-CMP kinase GO:0005524|GO:0006139|GO:0019205 KEGG: 00230+2.7.4.3|KEGG: 00730+2.7.4.3|MetaCyc: PWY-7219|Reactome: R-HSA-499943 CDA09_05965 8745ac25c19688890f6a536a7528165d 217 PRINTS PR00094 Adenylate kinase signature 4 17 4.6E-36 T 01-11-2018 IPR000850 Adenylate kinase/UMP-CMP kinase GO:0005524|GO:0006139|GO:0019205 KEGG: 00230+2.7.4.3|KEGG: 00730+2.7.4.3|MetaCyc: PWY-7219|Reactome: R-HSA-499943 CDA09_05965 8745ac25c19688890f6a536a7528165d 217 PRINTS PR00094 Adenylate kinase signature 156 171 4.6E-36 T 01-11-2018 IPR000850 Adenylate kinase/UMP-CMP kinase GO:0005524|GO:0006139|GO:0019205 KEGG: 00230+2.7.4.3|KEGG: 00730+2.7.4.3|MetaCyc: PWY-7219|Reactome: R-HSA-499943 CDA09_05965 8745ac25c19688890f6a536a7528165d 217 Pfam PF00406 Adenylate kinase 5 185 1.5E-58 T 01-11-2018 CDA09_05965 8745ac25c19688890f6a536a7528165d 217 Pfam PF05191 Adenylate kinase, active site lid 123 158 1.1E-16 T 01-11-2018 IPR007862 Adenylate kinase, active site lid domain GO:0004017 KEGG: 00230+2.7.4.3|KEGG: 00730+2.7.4.3|MetaCyc: PWY-7219 CDA09_05965 8745ac25c19688890f6a536a7528165d 217 Gene3D G3DSA:3.40.50.300 1 217 6.6E-76 T 01-11-2018 CDA09_04575 85cf9990937ddb6f92df858cb63037a1 913 SUPERFAMILY SSF50692 556 702 6.33E-43 T 01-11-2018 IPR009010 Aspartate decarboxylase-like domain superfamily CDA09_04575 85cf9990937ddb6f92df858cb63037a1 913 ProSitePatterns PS00490 Prokaryotic molybdopterin oxidoreductases signature 2. 431 448 - T 01-11-2018 IPR006655 Molybdopterin oxidoreductase, prokaryotic, conserved site GO:0009055|GO:0016491|GO:0055114 CDA09_04575 85cf9990937ddb6f92df858cb63037a1 913 PIRSF PIRSF036643 1 727 2.4E-177 T 01-11-2018 CDA09_04575 85cf9990937ddb6f92df858cb63037a1 913 Gene3D G3DSA:2.40.40.20 575 702 6.2E-40 T 01-11-2018 CDA09_04575 85cf9990937ddb6f92df858cb63037a1 913 SMART SM00926 1 54 2.6E-17 T 01-11-2018 IPR006963 Molybdopterin oxidoreductase, 4Fe-4S domain GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 CDA09_04575 85cf9990937ddb6f92df858cb63037a1 913 Gene3D G3DSA:2.20.25.90 1 52 2.5E-16 T 01-11-2018 CDA09_04575 85cf9990937ddb6f92df858cb63037a1 913 Gene3D G3DSA:1.10.10.1100 860 910 1.1E-9 T 01-11-2018 CDA09_04575 85cf9990937ddb6f92df858cb63037a1 913 Pfam PF04879 Molybdopterin oxidoreductase Fe4S4 domain 2 50 2.8E-18 T 01-11-2018 IPR006963 Molybdopterin oxidoreductase, 4Fe-4S domain GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 CDA09_04575 85cf9990937ddb6f92df858cb63037a1 913 Pfam PF00384 Molybdopterin oxidoreductase 57 485 3.5E-89 T 01-11-2018 IPR006656 Molybdopterin oxidoreductase GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 CDA09_04575 85cf9990937ddb6f92df858cb63037a1 913 Pfam PF01568 Molydopterin dinucleotide binding domain 585 695 6.0E-31 T 01-11-2018 IPR006657 Molybdopterin dinucleotide-binding domain GO:0016491|GO:0043546|GO:0055114 CDA09_04575 85cf9990937ddb6f92df858cb63037a1 913 Gene3D G3DSA:3.40.228.10 137 338 1.1E-197 T 01-11-2018 CDA09_04575 85cf9990937ddb6f92df858cb63037a1 913 SUPERFAMILY SSF53706 3 570 2.22E-207 T 01-11-2018 CDA09_04575 85cf9990937ddb6f92df858cb63037a1 913 Gene3D G3DSA:3.40.50.740 67 541 1.1E-197 T 01-11-2018 CDA09_04575 85cf9990937ddb6f92df858cb63037a1 913 Pfam PF04324 BFD-like [2Fe-2S] binding domain 860 907 2.1E-9 T 01-11-2018 IPR007419 BFD-like [2Fe-2S]-binding domain CDA09_14950 85cf202fe6244bca14af168de8ebb812 177 SUPERFAMILY SSF46565 8 80 6.67E-15 T 01-11-2018 IPR036869 Chaperone J-domain superfamily CDA09_14950 85cf202fe6244bca14af168de8ebb812 177 Gene3D G3DSA:1.20.1280.20 88 176 5.5E-23 T 01-11-2018 IPR036386 HscB, C-terminal domain superfamily GO:0051259 Reactome: R-HSA-1268020|Reactome: R-HSA-1362409 CDA09_14950 85cf202fe6244bca14af168de8ebb812 177 TIGRFAM TIGR00714 hscB: Fe-S protein assembly co-chaperone HscB 19 173 2.7E-30 T 01-11-2018 IPR004640 Co-chaperone Hsc20 GO:0001671|GO:0051087|GO:0097428 Reactome: R-HSA-1268020|Reactome: R-HSA-1362409 CDA09_14950 85cf202fe6244bca14af168de8ebb812 177 Gene3D G3DSA:1.10.287.110 1 79 6.3E-20 T 01-11-2018 IPR036869 Chaperone J-domain superfamily CDA09_14950 85cf202fe6244bca14af168de8ebb812 177 Pfam PF07743 HSCB C-terminal oligomerisation domain 93 169 5.7E-21 T 01-11-2018 IPR009073 Co-chaperone HscB, C-terminal oligomerisation domain GO:0051259 Reactome: R-HSA-1268020|Reactome: R-HSA-1362409 CDA09_14950 85cf202fe6244bca14af168de8ebb812 177 SUPERFAMILY SSF47144 88 175 1.57E-24 T 01-11-2018 IPR036386 HscB, C-terminal domain superfamily GO:0051259 Reactome: R-HSA-1268020|Reactome: R-HSA-1362409 CDA09_14950 85cf202fe6244bca14af168de8ebb812 177 Hamap MF_00682 Co-chaperone protein HscB [hscB]. 7 176 24.147 T 01-11-2018 IPR004640 Co-chaperone Hsc20 GO:0001671|GO:0051087|GO:0097428 Reactome: R-HSA-1268020|Reactome: R-HSA-1362409 CDA09_19135 367b105066faedb048b1f411317ff1c6 82 SUPERFAMILY SSF143120 1 44 4.97E-9 T 01-11-2018 IPR036165 YefM-like superfamily CDA09_19135 367b105066faedb048b1f411317ff1c6 82 Pfam PF02604 Antitoxin Phd_YefM, type II toxin-antitoxin system 1 44 1.2E-9 T 01-11-2018 IPR006442 Type II toxin-antitoxin system, antitoxin Phd/YefM CDA09_19135 367b105066faedb048b1f411317ff1c6 82 Gene3D G3DSA:3.40.1620.10 1 41 1.7E-12 T 01-11-2018 CDA09_22925 795e54caad9fbfdbc4edbf6c61874981 191 PIRSF PIRSF016919 1 191 5.8E-54 T 01-11-2018 IPR007038 Hydrogenase/Urease accessory protein HupE/UreJ protein CDA09_22925 795e54caad9fbfdbc4edbf6c61874981 191 Pfam PF04955 HupE / UreJ protein 10 187 6.6E-54 T 01-11-2018 IPR007038 Hydrogenase/Urease accessory protein HupE/UreJ protein CDA09_15715 bd959cd72af0b40f78603b8538b9fd0a 130 PRINTS PR00604 Class IA and IB cytochrome C signature 112 120 3.0E-18 T 01-11-2018 IPR002327 Cytochrome c, class IA/ IB GO:0009055|GO:0020037 Reactome: R-HSA-111457|Reactome: R-HSA-111458|Reactome: R-HSA-111459|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 CDA09_15715 bd959cd72af0b40f78603b8538b9fd0a 130 PRINTS PR00604 Class IA and IB cytochrome C signature 36 43 3.0E-18 T 01-11-2018 IPR002327 Cytochrome c, class IA/ IB GO:0009055|GO:0020037 Reactome: R-HSA-111457|Reactome: R-HSA-111458|Reactome: R-HSA-111459|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 CDA09_15715 bd959cd72af0b40f78603b8538b9fd0a 130 PRINTS PR00604 Class IA and IB cytochrome C signature 62 72 3.0E-18 T 01-11-2018 IPR002327 Cytochrome c, class IA/ IB GO:0009055|GO:0020037 Reactome: R-HSA-111457|Reactome: R-HSA-111458|Reactome: R-HSA-111459|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 CDA09_15715 bd959cd72af0b40f78603b8538b9fd0a 130 PRINTS PR00604 Class IA and IB cytochrome C signature 95 105 3.0E-18 T 01-11-2018 IPR002327 Cytochrome c, class IA/ IB GO:0009055|GO:0020037 Reactome: R-HSA-111457|Reactome: R-HSA-111458|Reactome: R-HSA-111459|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 CDA09_15715 bd959cd72af0b40f78603b8538b9fd0a 130 PRINTS PR00604 Class IA and IB cytochrome C signature 76 92 3.0E-18 T 01-11-2018 IPR002327 Cytochrome c, class IA/ IB GO:0009055|GO:0020037 Reactome: R-HSA-111457|Reactome: R-HSA-111458|Reactome: R-HSA-111459|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 CDA09_15715 bd959cd72af0b40f78603b8538b9fd0a 130 PRINTS PR00604 Class IA and IB cytochrome C signature 46 61 3.0E-18 T 01-11-2018 IPR002327 Cytochrome c, class IA/ IB GO:0009055|GO:0020037 Reactome: R-HSA-111457|Reactome: R-HSA-111458|Reactome: R-HSA-111459|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 CDA09_15715 bd959cd72af0b40f78603b8538b9fd0a 130 Pfam PF00034 Cytochrome c 28 119 2.4E-6 T 01-11-2018 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 Reactome: R-HSA-111457|Reactome: R-HSA-111458|Reactome: R-HSA-111459|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 CDA09_15715 bd959cd72af0b40f78603b8538b9fd0a 130 SUPERFAMILY SSF46626 24 119 1.92E-28 T 01-11-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 CDA09_15715 bd959cd72af0b40f78603b8538b9fd0a 130 Gene3D G3DSA:1.10.760.10 2 120 3.6E-36 T 01-11-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 CDA09_22495 dc170a33fd8a4ea54a527716c48a8556 762 Gene3D G3DSA:2.60.40.10 574 671 1.1E-5 T 01-11-2018 IPR013783 Immunoglobulin-like fold CDA09_08155 6581780d3eb1f3ae13127dce661bcf8c 499 Pfam PF02789 Cytosol aminopeptidase family, N-terminal domain 19 147 3.5E-28 T 01-11-2018 IPR008283 Peptidase M17, leucyl aminopeptidase, N-terminal GO:0004177|GO:0005622|GO:0006508 KEGG: 00480+3.4.11.1 CDA09_08155 6581780d3eb1f3ae13127dce661bcf8c 499 SUPERFAMILY SSF52949 2 184 2.24E-42 T 01-11-2018 CDA09_08155 6581780d3eb1f3ae13127dce661bcf8c 499 SUPERFAMILY SSF53187 179 492 2.76E-126 T 01-11-2018 CDA09_08155 6581780d3eb1f3ae13127dce661bcf8c 499 PRINTS PR00481 Cytosol aminopeptidase signature 262 279 1.6E-55 T 01-11-2018 IPR011356 Peptidase M17, leucine aminopeptidase/peptidase B GO:0004177|GO:0005737|GO:0008235|GO:0019538|GO:0030145 KEGG: 00480+3.4.11.1 CDA09_08155 6581780d3eb1f3ae13127dce661bcf8c 499 PRINTS PR00481 Cytosol aminopeptidase signature 321 342 1.6E-55 T 01-11-2018 IPR011356 Peptidase M17, leucine aminopeptidase/peptidase B GO:0004177|GO:0005737|GO:0008235|GO:0019538|GO:0030145 KEGG: 00480+3.4.11.1 CDA09_08155 6581780d3eb1f3ae13127dce661bcf8c 499 PRINTS PR00481 Cytosol aminopeptidase signature 343 363 1.6E-55 T 01-11-2018 IPR011356 Peptidase M17, leucine aminopeptidase/peptidase B GO:0004177|GO:0005737|GO:0008235|GO:0019538|GO:0030145 KEGG: 00480+3.4.11.1 CDA09_08155 6581780d3eb1f3ae13127dce661bcf8c 499 PRINTS PR00481 Cytosol aminopeptidase signature 371 386 1.6E-55 T 01-11-2018 IPR011356 Peptidase M17, leucine aminopeptidase/peptidase B GO:0004177|GO:0005737|GO:0008235|GO:0019538|GO:0030145 KEGG: 00480+3.4.11.1 CDA09_08155 6581780d3eb1f3ae13127dce661bcf8c 499 PRINTS PR00481 Cytosol aminopeptidase signature 284 305 1.6E-55 T 01-11-2018 IPR011356 Peptidase M17, leucine aminopeptidase/peptidase B GO:0004177|GO:0005737|GO:0008235|GO:0019538|GO:0030145 KEGG: 00480+3.4.11.1 CDA09_08155 6581780d3eb1f3ae13127dce661bcf8c 499 Hamap MF_00181 Probable cytosol aminopeptidase [pepA]. 3 495 38.923 T 01-11-2018 IPR023042 Peptidase M17, leucine aminopeptidase KEGG: 00480+3.4.11.1 CDA09_08155 6581780d3eb1f3ae13127dce661bcf8c 499 Pfam PF00883 Cytosol aminopeptidase family, catalytic domain 186 486 1.3E-127 T 01-11-2018 IPR000819 Peptidase M17, leucyl aminopeptidase, C-terminal GO:0004177|GO:0005622|GO:0006508 KEGG: 00480+3.4.11.1 CDA09_08155 6581780d3eb1f3ae13127dce661bcf8c 499 Gene3D G3DSA:3.40.630.10 179 495 5.0E-140 T 01-11-2018 CDA09_08155 6581780d3eb1f3ae13127dce661bcf8c 499 ProSitePatterns PS00631 Cytosol aminopeptidase signature. 347 354 - T 01-11-2018 IPR000819 Peptidase M17, leucyl aminopeptidase, C-terminal GO:0004177|GO:0005622|GO:0006508 KEGG: 00480+3.4.11.1 CDA09_08155 6581780d3eb1f3ae13127dce661bcf8c 499 Gene3D G3DSA:3.40.220.10 1 161 4.3E-48 T 01-11-2018 CDA09_02235 849208ed9d9d428bf8b17c5727212a95 274 Gene3D G3DSA:3.40.50.1980 149 270 4.1E-12 T 01-11-2018 CDA09_02235 849208ed9d9d428bf8b17c5727212a95 274 Gene3D G3DSA:3.40.50.1980 28 145 8.9E-19 T 01-11-2018 CDA09_02235 849208ed9d9d428bf8b17c5727212a95 274 Pfam PF01497 Periplasmic binding protein 30 209 9.5E-16 T 01-11-2018 IPR002491 ABC transporter periplasmic binding domain CDA09_02235 849208ed9d9d428bf8b17c5727212a95 274 SUPERFAMILY SSF53807 29 268 4.71E-38 T 01-11-2018 CDA09_02975 5376766aae269a55e52658faf1340970 371 Hamap MF_00456 Glutamate 5-kinase [proB]. 9 264 36.309 T 01-11-2018 IPR005715 Glutamate 5-kinase/delta-1-pyrroline-5-carboxylate synthase GO:0005737|GO:0006561 KEGG: 00330+2.7.2.11|KEGG: 00332+2.7.2.11|MetaCyc: PWY-3341|MetaCyc: PWY-6922|Reactome: R-HSA-70614 CDA09_02975 5376766aae269a55e52658faf1340970 371 TIGRFAM TIGR01027 proB: glutamate 5-kinase 9 370 1.9E-131 T 01-11-2018 IPR005715 Glutamate 5-kinase/delta-1-pyrroline-5-carboxylate synthase GO:0005737|GO:0006561 KEGG: 00330+2.7.2.11|KEGG: 00332+2.7.2.11|MetaCyc: PWY-3341|MetaCyc: PWY-6922|Reactome: R-HSA-70614 CDA09_02975 5376766aae269a55e52658faf1340970 371 SMART SM00359 281 363 2.2E-17 T 01-11-2018 IPR002478 PUA domain GO:0003723 CDA09_02975 5376766aae269a55e52658faf1340970 371 PRINTS PR00474 Glutamate 5-kinase family signature 120 141 7.1E-51 T 01-11-2018 IPR001057 Glutamate/acetylglutamate kinase Reactome: R-HSA-70614 CDA09_02975 5376766aae269a55e52658faf1340970 371 PRINTS PR00474 Glutamate 5-kinase family signature 80 108 7.1E-51 T 01-11-2018 IPR001057 Glutamate/acetylglutamate kinase Reactome: R-HSA-70614 CDA09_02975 5376766aae269a55e52658faf1340970 371 PRINTS PR00474 Glutamate 5-kinase family signature 213 233 7.1E-51 T 01-11-2018 IPR001057 Glutamate/acetylglutamate kinase Reactome: R-HSA-70614 CDA09_02975 5376766aae269a55e52658faf1340970 371 PRINTS PR00474 Glutamate 5-kinase family signature 46 60 7.1E-51 T 01-11-2018 IPR001057 Glutamate/acetylglutamate kinase Reactome: R-HSA-70614 CDA09_02975 5376766aae269a55e52658faf1340970 371 PRINTS PR00474 Glutamate 5-kinase family signature 152 179 7.1E-51 T 01-11-2018 IPR001057 Glutamate/acetylglutamate kinase Reactome: R-HSA-70614 CDA09_02975 5376766aae269a55e52658faf1340970 371 Pfam PF00696 Amino acid kinase family 10 237 3.8E-44 T 01-11-2018 IPR001048 Aspartate/glutamate/uridylate kinase Reactome: R-HSA-70614 CDA09_02975 5376766aae269a55e52658faf1340970 371 SUPERFAMILY SSF53633 9 259 7.99E-68 T 01-11-2018 IPR036393 Acetylglutamate kinase-like superfamily CDA09_02975 5376766aae269a55e52658faf1340970 371 Gene3D G3DSA:3.40.1160.10 1 269 7.4E-92 T 01-11-2018 IPR036393 Acetylglutamate kinase-like superfamily CDA09_02975 5376766aae269a55e52658faf1340970 371 PIRSF PIRSF000729 4 371 5.5E-131 T 01-11-2018 IPR011529 Glutamate 5-kinase GO:0004349|GO:0005737|GO:0006561 KEGG: 00330+2.7.2.11|KEGG: 00332+2.7.2.11|MetaCyc: PWY-3341|MetaCyc: PWY-6922 CDA09_02975 5376766aae269a55e52658faf1340970 371 Pfam PF01472 PUA domain 281 352 4.6E-22 T 01-11-2018 IPR002478 PUA domain GO:0003723 CDA09_02975 5376766aae269a55e52658faf1340970 371 SUPERFAMILY SSF88697 281 370 9.94E-25 T 01-11-2018 IPR015947 PUA-like superfamily CDA09_02975 5376766aae269a55e52658faf1340970 371 Gene3D G3DSA:2.30.130.10 270 371 2.8E-33 T 01-11-2018 IPR036974 PUA domain superfamily GO:0003723 CDA09_02975 5376766aae269a55e52658faf1340970 371 ProSitePatterns PS00902 Glutamate 5-kinase signature. 211 228 - T 01-11-2018 IPR019797 Glutamate 5-kinase, conserved site GO:0004349|GO:0006561 KEGG: 00330+2.7.2.11|KEGG: 00332+2.7.2.11|MetaCyc: PWY-3341|MetaCyc: PWY-6922|Reactome: R-HSA-70614 CDA09_00420 3ede5dc3069911380f7f072b89845c05 242 SMART SM00382 26 213 9.9E-17 T 01-11-2018 IPR003593 AAA+ ATPase domain CDA09_00420 3ede5dc3069911380f7f072b89845c05 242 Gene3D G3DSA:3.40.50.300 1 242 3.6E-73 T 01-11-2018 CDA09_00420 3ede5dc3069911380f7f072b89845c05 242 SUPERFAMILY SSF52540 1 235 1.42E-76 T 01-11-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CDA09_00420 3ede5dc3069911380f7f072b89845c05 242 PIRSF PIRSF039085 1 241 1.1E-103 T 01-11-2018 IPR030679 ABC-type amino acid transport system, ATPase component, HisP-type GO:0003333|GO:0015424 CDA09_00420 3ede5dc3069911380f7f072b89845c05 242 ProSitePatterns PS00211 ABC transporters family signature. 137 151 - T 01-11-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 CDA09_00420 3ede5dc3069911380f7f072b89845c05 242 Pfam PF00005 ABC transporter 18 165 1.2E-32 T 01-11-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 CDA09_11605 9d5d1d0c31c2220cae109aab72e284d8 345 Gene3D G3DSA:3.20.20.70 1 345 8.6E-141 T 01-11-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 CDA09_11605 9d5d1d0c31c2220cae109aab72e284d8 345 TIGRFAM TIGR01521 FruBisAldo_II_B: fructose-bisphosphate aldolase, class II, Calvin cycle subtype 4 345 3.1E-191 T 01-11-2018 IPR006412 Fructose-bisphosphate aldolase, class II, Calvin cycle subtype GO:0004332|GO:0006096 KEGG: 00010+4.1.2.13|KEGG: 00030+4.1.2.13|KEGG: 00051+4.1.2.13|KEGG: 00680+4.1.2.13|KEGG: 00710+4.1.2.13|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-6142|MetaCyc: PWY-7385 CDA09_11605 9d5d1d0c31c2220cae109aab72e284d8 345 SUPERFAMILY SSF51569 3 329 4.1E-103 T 01-11-2018 CDA09_11605 9d5d1d0c31c2220cae109aab72e284d8 345 TIGRFAM TIGR00167 cbbA: ketose-bisphosphate aldolase 1 329 1.5E-92 T 01-11-2018 IPR000771 Fructose-bisphosphate aldolase, class-II GO:0005975|GO:0008270|GO:0016832 CDA09_11605 9d5d1d0c31c2220cae109aab72e284d8 345 PIRSF PIRSF001359 1 329 2.6E-79 T 01-11-2018 IPR000771 Fructose-bisphosphate aldolase, class-II GO:0005975|GO:0008270|GO:0016832 CDA09_11605 9d5d1d0c31c2220cae109aab72e284d8 345 Pfam PF01116 Fructose-bisphosphate aldolase class-II 6 328 3.5E-91 T 01-11-2018 IPR000771 Fructose-bisphosphate aldolase, class-II GO:0005975|GO:0008270|GO:0016832 CDA09_11605 9d5d1d0c31c2220cae109aab72e284d8 345 ProSitePatterns PS00806 Fructose-bisphosphate aldolase class-II signature 2. 139 150 - T 01-11-2018 IPR000771 Fructose-bisphosphate aldolase, class-II GO:0005975|GO:0008270|GO:0016832 CDA09_15795 73b6db34cbb1e3d2ef76f1debe94d8ca 282 SUPERFAMILY SSF54675 3 112 3.06E-30 T 01-11-2018 CDA09_15795 73b6db34cbb1e3d2ef76f1debe94d8ca 282 PIRSF PIRSF006250 5 281 6.0E-91 T 01-11-2018 IPR027277 Nicotinate-nucleotide pyrophosphorylase/Putative pyrophosphorylase ModD Reactome: R-HSA-196807 CDA09_15795 73b6db34cbb1e3d2ef76f1debe94d8ca 282 Pfam PF02749 Quinolinate phosphoribosyl transferase, N-terminal domain 23 111 7.1E-25 T 01-11-2018 IPR022412 Quinolinate phosphoribosyl transferase, N-terminal GO:0016763 Reactome: R-HSA-196807 CDA09_15795 73b6db34cbb1e3d2ef76f1debe94d8ca 282 TIGRFAM TIGR00078 nadC: nicotinate-nucleotide diphosphorylase (carboxylating) 15 278 2.2E-90 T 01-11-2018 IPR004393 Nicotinate-nucleotide pyrophosphorylase GO:0004514|GO:0019363 KEGG: 00760+2.4.2.19|MetaCyc: PWY-5316|MetaCyc: PWY-5653|MetaCyc: PWY-7342|Reactome: R-HSA-196807 CDA09_15795 73b6db34cbb1e3d2ef76f1debe94d8ca 282 Pfam PF01729 Quinolinate phosphoribosyl transferase, C-terminal domain 114 278 3.4E-56 T 01-11-2018 IPR002638 Quinolinate phosphoribosyl transferase, C-terminal GO:0004514|GO:0009435 Reactome: R-HSA-196807 CDA09_15795 73b6db34cbb1e3d2ef76f1debe94d8ca 282 Gene3D G3DSA:3.20.20.70 122 269 2.8E-107 T 01-11-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 CDA09_15795 73b6db34cbb1e3d2ef76f1debe94d8ca 282 Gene3D G3DSA:3.90.1170.20 10 278 2.8E-107 T 01-11-2018 IPR037128 Quinolinate phosphoribosyl transferase, N-terminal domain superfamily GO:0016763 Reactome: R-HSA-196807 CDA09_15795 73b6db34cbb1e3d2ef76f1debe94d8ca 282 SUPERFAMILY SSF51690 114 278 5.1E-57 T 01-11-2018 IPR036068 Nicotinate phosphoribosyltransferase-like, C-terminal GO:0004514|GO:0009435 KEGG: 00760+6.3.4.21|MetaCyc: PWY-5381 CDA09_15760 2236c07cfbde74c6d39f91349c0dfe01 435 Gene3D G3DSA:3.30.70.1050 1 115 3.6E-33 T 01-11-2018 IPR036611 Trigger factor ribosome-binding domain superfamily GO:0006457|GO:0015031 CDA09_15760 2236c07cfbde74c6d39f91349c0dfe01 435 SUPERFAMILY SSF54534 89 241 5.11E-31 T 01-11-2018 CDA09_15760 2236c07cfbde74c6d39f91349c0dfe01 435 TIGRFAM TIGR00115 tig: trigger factor 11 413 1.2E-129 T 01-11-2018 IPR005215 Trigger factor GO:0015031 CDA09_15760 2236c07cfbde74c6d39f91349c0dfe01 435 SUPERFAMILY SSF109998 248 431 1.7E-43 T 01-11-2018 IPR027304 Trigger factor/SurA domain superfamily CDA09_15760 2236c07cfbde74c6d39f91349c0dfe01 435 Hamap MF_00303 Trigger factor [tig]. 1 420 19.533 T 01-11-2018 IPR005215 Trigger factor GO:0015031 CDA09_15760 2236c07cfbde74c6d39f91349c0dfe01 435 Gene3D G3DSA:3.10.50.40 150 246 8.2E-88 T 01-11-2018 CDA09_15760 2236c07cfbde74c6d39f91349c0dfe01 435 Gene3D G3DSA:1.10.3120.10 116 418 8.2E-88 T 01-11-2018 IPR037041 Trigger factor, C-terminal domain superfamily GO:0006457|GO:0015031 CDA09_15760 2236c07cfbde74c6d39f91349c0dfe01 435 Pfam PF05697 Bacterial trigger factor protein (TF) 1 142 8.7E-35 T 01-11-2018 IPR008881 Trigger factor, ribosome-binding, bacterial GO:0006457|GO:0015031 CDA09_15760 2236c07cfbde74c6d39f91349c0dfe01 435 Pfam PF05698 Bacterial trigger factor protein (TF) C-terminus 263 414 4.2E-31 T 01-11-2018 IPR008880 Trigger factor, C-terminal GO:0006457|GO:0015031 CDA09_15760 2236c07cfbde74c6d39f91349c0dfe01 435 PIRSF PIRSF003095 1 435 9.7E-116 T 01-11-2018 IPR005215 Trigger factor GO:0015031 CDA09_15760 2236c07cfbde74c6d39f91349c0dfe01 435 SUPERFAMILY SSF102735 1 128 4.05E-34 T 01-11-2018 IPR036611 Trigger factor ribosome-binding domain superfamily GO:0006457|GO:0015031 CDA09_15760 2236c07cfbde74c6d39f91349c0dfe01 435 Pfam PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase 156 236 2.1E-13 T 01-11-2018 IPR001179 FKBP-type peptidyl-prolyl cis-trans isomerase domain CDA09_02545 3204c6bd4788f86801e6f8fbbbf5f694 421 Pfam PF04932 O-Antigen ligase 201 350 3.8E-13 T 01-11-2018 IPR007016 O-antigen ligase-related CDA09_18440 307a39379d28de8e6d0076b847f43f79 1029 Gene3D G3DSA:3.90.550.10 3 266 9.0E-6 T 01-11-2018 IPR029044 Nucleotide-diphospho-sugar transferases CDA09_18440 307a39379d28de8e6d0076b847f43f79 1029 SUPERFAMILY SSF53448 4 252 8.44E-17 T 01-11-2018 IPR029044 Nucleotide-diphospho-sugar transferases CDA09_18440 307a39379d28de8e6d0076b847f43f79 1029 Pfam PF00534 Glycosyl transferases group 1 832 1000 8.2E-9 T 01-11-2018 IPR001296 Glycosyl transferase, family 1 CDA09_18440 307a39379d28de8e6d0076b847f43f79 1029 SUPERFAMILY SSF53756 719 1018 5.13E-25 T 01-11-2018 CDA09_18440 307a39379d28de8e6d0076b847f43f79 1029 Gene3D G3DSA:3.40.50.2000 803 1020 5.3E-32 T 01-11-2018 CDA09_17435 8ca3eaeb2328b6c00eab7d30330bf108 126 SMART SM00422 22 92 3.5E-6 T 01-11-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 CDA09_17435 8ca3eaeb2328b6c00eab7d30330bf108 126 Gene3D G3DSA:1.10.1660.10 18 96 3.7E-21 T 01-11-2018 CDA09_17435 8ca3eaeb2328b6c00eab7d30330bf108 126 SUPERFAMILY SSF46955 20 119 7.78E-19 T 01-11-2018 IPR009061 Putative DNA-binding domain superfamily CDA09_17435 8ca3eaeb2328b6c00eab7d30330bf108 126 Pfam PF13411 MerR HTH family regulatory protein 22 89 1.2E-21 T 01-11-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 CDA09_17485 72dc3e1815636331e821645e0a60751c 401 TIGRFAM TIGR04051 rSAM_NirJ: heme d1 biosynthesis radical SAM protein NirJ 25 378 1.8E-191 T 01-11-2018 IPR023992 Heme D1 biosynthesis, radical SAM protein NirJ CDA09_17485 72dc3e1815636331e821645e0a60751c 401 Gene3D G3DSA:3.20.20.70 26 246 7.4E-47 T 01-11-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 CDA09_17485 72dc3e1815636331e821645e0a60751c 401 PIRSF PIRSF037420 13 392 8.2E-136 T 01-11-2018 IPR017200 Coenzyme PQQ synthesis protein E CDA09_17485 72dc3e1815636331e821645e0a60751c 401 SUPERFAMILY SSF102114 24 350 7.72E-68 T 01-11-2018 CDA09_17485 72dc3e1815636331e821645e0a60751c 401 Pfam PF04055 Radical SAM superfamily 32 186 3.3E-20 T 01-11-2018 IPR007197 Radical SAM GO:0003824|GO:0051536 CDA09_17485 72dc3e1815636331e821645e0a60751c 401 Pfam PF13353 4Fe-4S single cluster domain 29 113 6.6E-8 T 01-11-2018 CDA09_08190 d4c8db2db19977b72bf895ab0b26e745 385 Pfam PF07690 Major Facilitator Superfamily 2 221 5.0E-25 T 01-11-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 CDA09_08190 d4c8db2db19977b72bf895ab0b26e745 385 SUPERFAMILY SSF103473 1 373 1.44E-57 T 01-11-2018 IPR036259 MFS transporter superfamily CDA09_08190 d4c8db2db19977b72bf895ab0b26e745 385 ProSitePatterns PS00216 Sugar transport proteins signature 1. 254 269 - T 01-11-2018 IPR005829 Sugar transporter, conserved site GO:0005215|GO:0016021|GO:0055085 CDA09_08190 d4c8db2db19977b72bf895ab0b26e745 385 Gene3D G3DSA:1.20.1250.20 1 373 9.3E-50 T 01-11-2018 CDA09_09000 a2d15bf0ed32865dbc9d41ab33211020 338 TIGRFAM TIGR03478 DMSO_red_II_bet: DMSO reductase family type II enzyme, iron-sulfur subunit 1 320 1.1E-145 T 01-11-2018 IPR017839 DMSO reductase family, type II, iron-sulphur subunit GO:0009061|GO:0042597|GO:0051536 CDA09_09000 a2d15bf0ed32865dbc9d41ab33211020 338 Gene3D G3DSA:3.30.70.20 1 334 5.6E-128 T 01-11-2018 CDA09_09000 a2d15bf0ed32865dbc9d41ab33211020 338 Pfam PF13247 4Fe-4S dicluster domain 123 218 2.1E-31 T 01-11-2018 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain CDA09_09000 a2d15bf0ed32865dbc9d41ab33211020 338 SUPERFAMILY SSF54862 1 296 3.98E-73 T 01-11-2018 CDA09_19425 239bbfe3a5109608f57d68e93e83335e 441 Gene3D G3DSA:1.10.3370.10 10 424 5.1E-162 T 01-11-2018 IPR023201 SecY domain superfamily Reactome: R-HSA-1236974|Reactome: R-HSA-1799339|Reactome: R-HSA-381038 CDA09_19425 239bbfe3a5109608f57d68e93e83335e 441 TIGRFAM TIGR00967 3a0501s007: preprotein translocase, SecY subunit 18 424 1.1E-131 T 01-11-2018 IPR002208 SecY/SEC61-alpha family GO:0015031|GO:0016020 Reactome: R-HSA-1236974|Reactome: R-HSA-1799339|Reactome: R-HSA-381038 CDA09_19425 239bbfe3a5109608f57d68e93e83335e 441 ProSitePatterns PS00755 Protein secY signature 1. 74 93 - T 01-11-2018 IPR030659 SecY conserved site Reactome: R-HSA-1236974|Reactome: R-HSA-1799339|Reactome: R-HSA-381038 CDA09_19425 239bbfe3a5109608f57d68e93e83335e 441 PIRSF PIRSF004557 7 435 4.8E-124 T 01-11-2018 IPR002208 SecY/SEC61-alpha family GO:0015031|GO:0016020 Reactome: R-HSA-1236974|Reactome: R-HSA-1799339|Reactome: R-HSA-381038 CDA09_19425 239bbfe3a5109608f57d68e93e83335e 441 PRINTS PR00303 Preprotein translocase SecY subunit signature 267 286 2.1E-92 T 01-11-2018 CDA09_19425 239bbfe3a5109608f57d68e93e83335e 441 PRINTS PR00303 Preprotein translocase SecY subunit signature 149 174 2.1E-92 T 01-11-2018 CDA09_19425 239bbfe3a5109608f57d68e93e83335e 441 PRINTS PR00303 Preprotein translocase SecY subunit signature 365 383 2.1E-92 T 01-11-2018 CDA09_19425 239bbfe3a5109608f57d68e93e83335e 441 PRINTS PR00303 Preprotein translocase SecY subunit signature 114 137 2.1E-92 T 01-11-2018 CDA09_19425 239bbfe3a5109608f57d68e93e83335e 441 PRINTS PR00303 Preprotein translocase SecY subunit signature 175 198 2.1E-92 T 01-11-2018 CDA09_19425 239bbfe3a5109608f57d68e93e83335e 441 PRINTS PR00303 Preprotein translocase SecY subunit signature 21 39 2.1E-92 T 01-11-2018 CDA09_19425 239bbfe3a5109608f57d68e93e83335e 441 PRINTS PR00303 Preprotein translocase SecY subunit signature 73 93 2.1E-92 T 01-11-2018 CDA09_19425 239bbfe3a5109608f57d68e93e83335e 441 PRINTS PR00303 Preprotein translocase SecY subunit signature 397 415 2.1E-92 T 01-11-2018 CDA09_19425 239bbfe3a5109608f57d68e93e83335e 441 PRINTS PR00303 Preprotein translocase SecY subunit signature 310 332 2.1E-92 T 01-11-2018 CDA09_19425 239bbfe3a5109608f57d68e93e83335e 441 SUPERFAMILY SSF103491 9 419 8.37E-132 T 01-11-2018 IPR023201 SecY domain superfamily Reactome: R-HSA-1236974|Reactome: R-HSA-1799339|Reactome: R-HSA-381038 CDA09_19425 239bbfe3a5109608f57d68e93e83335e 441 Hamap MF_01465 Protein translocase subunit SecY [secY]. 8 428 29.504 T 01-11-2018 IPR026593 Protein translocase subunit SecY CDA09_19425 239bbfe3a5109608f57d68e93e83335e 441 ProSitePatterns PS00756 Protein secY signature 2. 168 185 - T 01-11-2018 IPR030659 SecY conserved site Reactome: R-HSA-1236974|Reactome: R-HSA-1799339|Reactome: R-HSA-381038 CDA09_19425 239bbfe3a5109608f57d68e93e83335e 441 Pfam PF00344 SecY translocase 74 412 2.6E-117 T 01-11-2018 IPR002208 SecY/SEC61-alpha family GO:0015031|GO:0016020 Reactome: R-HSA-1236974|Reactome: R-HSA-1799339|Reactome: R-HSA-381038 CDA09_06375 1c16992a3e7702c403b6f2a19e4e30ad 400 Pfam PF00999 Sodium/hydrogen exchanger family 21 384 7.1E-28 T 01-11-2018 IPR006153 Cation/H+ exchanger GO:0006812|GO:0015299|GO:0016021|GO:0055085 CDA09_06375 1c16992a3e7702c403b6f2a19e4e30ad 400 Gene3D G3DSA:1.20.1530.20 14 397 9.2E-34 T 01-11-2018 IPR038770 Sodium/solute symporter superfamily CDA09_04120 a42dec3b599e97f8ee29feaa226e4c93 342 Gene3D G3DSA:3.30.360.10 156 321 4.8E-111 T 01-11-2018 CDA09_04120 a42dec3b599e97f8ee29feaa226e4c93 342 Gene3D G3DSA:3.40.50.720 4 331 4.8E-111 T 01-11-2018 CDA09_04120 a42dec3b599e97f8ee29feaa226e4c93 342 PIRSF PIRSF000149 1 340 1.1E-119 T 01-11-2018 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 CDA09_04120 a42dec3b599e97f8ee29feaa226e4c93 342 SUPERFAMILY SSF51735 4 173 1.69E-46 T 01-11-2018 IPR036291 NAD(P)-binding domain superfamily CDA09_04120 a42dec3b599e97f8ee29feaa226e4c93 342 SUPERFAMILY SSF55347 157 320 6.85E-54 T 01-11-2018 CDA09_04120 a42dec3b599e97f8ee29feaa226e4c93 342 Pfam PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain 4 104 3.4E-28 T 01-11-2018 IPR020828 Glyceraldehyde 3-phosphate dehydrogenase, NAD(P) binding domain GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 CDA09_04120 a42dec3b599e97f8ee29feaa226e4c93 342 SMART SM00846 3 157 7.9E-60 T 01-11-2018 IPR020828 Glyceraldehyde 3-phosphate dehydrogenase, NAD(P) binding domain GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 CDA09_04120 a42dec3b599e97f8ee29feaa226e4c93 342 Pfam PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain 163 318 1.2E-46 T 01-11-2018 IPR020829 Glyceraldehyde 3-phosphate dehydrogenase, catalytic domain GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 CDA09_04120 a42dec3b599e97f8ee29feaa226e4c93 342 PRINTS PR00078 Glyceraldehyde-3-phosphate dehydrogenase signature 151 169 5.9E-21 T 01-11-2018 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 CDA09_04120 a42dec3b599e97f8ee29feaa226e4c93 342 PRINTS PR00078 Glyceraldehyde-3-phosphate dehydrogenase signature 112 125 5.9E-21 T 01-11-2018 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 CDA09_04120 a42dec3b599e97f8ee29feaa226e4c93 342 PRINTS PR00078 Glyceraldehyde-3-phosphate dehydrogenase signature 235 252 5.9E-21 T 01-11-2018 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 CDA09_04120 a42dec3b599e97f8ee29feaa226e4c93 342 PRINTS PR00078 Glyceraldehyde-3-phosphate dehydrogenase signature 178 194 5.9E-21 T 01-11-2018 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 CDA09_04120 a42dec3b599e97f8ee29feaa226e4c93 342 PRINTS PR00078 Glyceraldehyde-3-phosphate dehydrogenase signature 275 290 5.9E-21 T 01-11-2018 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 CDA09_08310 77fc5663c64bbfcacb54bdde32503c74 119 Pfam PF03206 Nitrogen fixation protein NifW 19 110 6.1E-31 T 01-11-2018 IPR004893 Nitrogen fixation protein NifW GO:0009399 CDA09_08310 77fc5663c64bbfcacb54bdde32503c74 119 Hamap MF_00529 Nitrogenase-stabilizing/protective protein NifW [nifW]. 14 115 20.458 T 01-11-2018 IPR004893 Nitrogen fixation protein NifW GO:0009399 CDA09_21955 9585e021a3eb8c82dc8915e8f9613d2e 256 ProSitePatterns PS00166 Enoyl-CoA hydratase/isomerase signature. 97 117 - T 01-11-2018 IPR018376 Enoyl-CoA hydratase/isomerase, conserved site GO:0003824 CDA09_21955 9585e021a3eb8c82dc8915e8f9613d2e 256 Gene3D G3DSA:1.10.12.10 199 255 3.1E-16 T 01-11-2018 IPR014748 Enoyl-CoA hydratase, C-terminal CDA09_21955 9585e021a3eb8c82dc8915e8f9613d2e 256 Pfam PF00378 Enoyl-CoA hydratase/isomerase 7 255 4.1E-61 T 01-11-2018 IPR001753 Enoyl-CoA hydratase/isomerase GO:0003824 CDA09_21955 9585e021a3eb8c82dc8915e8f9613d2e 256 SUPERFAMILY SSF52096 3 255 1.61E-81 T 01-11-2018 IPR029045 ClpP/crotonase-like domain superfamily CDA09_21955 9585e021a3eb8c82dc8915e8f9613d2e 256 Gene3D G3DSA:3.90.226.10 1 198 4.3E-66 T 01-11-2018 CDA09_17465 f7f4da97e53243daadaf8b7d48224f65 174 Pfam PF05198 Translation initiation factor IF-3, N-terminal domain 9 78 4.5E-30 T 01-11-2018 IPR019814 Translation initiation factor 3, N-terminal GO:0003743|GO:0006413 Reactome: R-HSA-5368286 CDA09_17465 f7f4da97e53243daadaf8b7d48224f65 174 Gene3D G3DSA:3.10.20.80 3 77 9.5E-32 T 01-11-2018 IPR036787 Translation initiation factor 3 (IF-3), N-terminal domain superfamily GO:0003743|GO:0006413 Reactome: R-HSA-5368286 CDA09_17465 f7f4da97e53243daadaf8b7d48224f65 174 SUPERFAMILY SSF55200 86 169 7.59E-34 T 01-11-2018 IPR036788 Translation initiation factor 3 (IF-3), C-terminal domain superfamily GO:0006413 Reactome: R-HSA-5368286 CDA09_17465 f7f4da97e53243daadaf8b7d48224f65 174 SUPERFAMILY SSF54364 7 79 2.35E-27 T 01-11-2018 IPR036787 Translation initiation factor 3 (IF-3), N-terminal domain superfamily GO:0003743|GO:0006413 Reactome: R-HSA-5368286 CDA09_17465 f7f4da97e53243daadaf8b7d48224f65 174 TIGRFAM TIGR00168 infC: translation initiation factor IF-3 9 171 1.9E-66 T 01-11-2018 IPR001288 Translation initiation factor 3 GO:0003743|GO:0006413 Reactome: R-HSA-5368286 CDA09_17465 f7f4da97e53243daadaf8b7d48224f65 174 ProSitePatterns PS00938 Initiation factor 3 signature. 60 73 - T 01-11-2018 IPR019813 Translation initiation factor 3, conserved site GO:0003743|GO:0006413 CDA09_17465 f7f4da97e53243daadaf8b7d48224f65 174 Hamap MF_00080 Translation initiation factor IF-3 [infC]. 3 172 30.86 T 01-11-2018 IPR001288 Translation initiation factor 3 GO:0003743|GO:0006413 Reactome: R-HSA-5368286 CDA09_17465 f7f4da97e53243daadaf8b7d48224f65 174 Pfam PF00707 Translation initiation factor IF-3, C-terminal domain 85 169 1.9E-38 T 01-11-2018 IPR019815 Translation initiation factor 3, C-terminal GO:0006413 Reactome: R-HSA-5368286 CDA09_17465 f7f4da97e53243daadaf8b7d48224f65 174 Gene3D G3DSA:3.30.110.10 78 173 2.0E-37 T 01-11-2018 IPR036788 Translation initiation factor 3 (IF-3), C-terminal domain superfamily GO:0006413 Reactome: R-HSA-5368286 CDA09_04630 32bdf2fe87ba1393f26d197574361229 422 Pfam PF00032 Cytochrome b(C-terminal)/b6/petD 288 397 3.7E-40 T 01-11-2018 IPR005798 Cytochrome b/b6, C-terminal GO:0009055|GO:0016020|GO:0016491 Reactome: R-HSA-611105 CDA09_04630 32bdf2fe87ba1393f26d197574361229 422 Gene3D G3DSA:1.20.810.10 1 422 1.5E-156 T 01-11-2018 IPR027387 Cytochrome b/b6-like domain superfamily Reactome: R-HSA-611105 CDA09_04630 32bdf2fe87ba1393f26d197574361229 422 SUPERFAMILY SSF81342 10 290 2.83E-96 T 01-11-2018 IPR016174 Di-haem cytochrome, transmembrane GO:0016020|GO:0022904 Reactome: R-HSA-611105 CDA09_04630 32bdf2fe87ba1393f26d197574361229 422 SUPERFAMILY SSF81648 291 416 1.44E-26 T 01-11-2018 IPR036150 Cytochrome b/b6, C-terminal domain superfamily GO:0009055|GO:0016020|GO:0016491 Reactome: R-HSA-611105 CDA09_04630 32bdf2fe87ba1393f26d197574361229 422 Pfam PF00033 Cytochrome b/b6/petB 27 222 3.3E-64 T 01-11-2018 IPR005797 Cytochrome b/b6, N-terminal GO:0009055|GO:0016020|GO:0016491 Reactome: R-HSA-611105 CDA09_04630 32bdf2fe87ba1393f26d197574361229 422 PIRSF PIRSF038885 1 422 6.2E-153 T 01-11-2018 IPR030689 Cytochrome b GO:0006122|GO:0008121|GO:0009055|GO:0045275 Reactome: R-HSA-611105 CDA09_18765 4b47725c3d72f88d13b06982910ab5aa 270 PIRSF PIRSF000193 1 266 3.7E-67 T 01-11-2018 IPR000304 Pyrroline-5-carboxylate reductase GO:0004735|GO:0006561|GO:0055114 KEGG: 00330+1.5.1.2|MetaCyc: PWY-3341|MetaCyc: PWY-4981|MetaCyc: PWY-6344|Reactome: R-HSA-70614 CDA09_18765 4b47725c3d72f88d13b06982910ab5aa 270 TIGRFAM TIGR00112 proC: pyrroline-5-carboxylate reductase 3 263 1.3E-77 T 01-11-2018 IPR000304 Pyrroline-5-carboxylate reductase GO:0004735|GO:0006561|GO:0055114 KEGG: 00330+1.5.1.2|MetaCyc: PWY-3341|MetaCyc: PWY-4981|MetaCyc: PWY-6344|Reactome: R-HSA-70614 CDA09_18765 4b47725c3d72f88d13b06982910ab5aa 270 SUPERFAMILY SSF51735 2 156 4.96E-32 T 01-11-2018 IPR036291 NAD(P)-binding domain superfamily CDA09_18765 4b47725c3d72f88d13b06982910ab5aa 270 Gene3D G3DSA:3.40.50.720 2 160 1.0E-42 T 01-11-2018 CDA09_18765 4b47725c3d72f88d13b06982910ab5aa 270 Pfam PF14748 Pyrroline-5-carboxylate reductase dimerisation 159 263 3.7E-33 T 01-11-2018 IPR029036 Pyrroline-5-carboxylate reductase, dimerisation domain KEGG: 00330+1.5.1.2|MetaCyc: PWY-3341|MetaCyc: PWY-4981|MetaCyc: PWY-6344|Reactome: R-HSA-70614 CDA09_18765 4b47725c3d72f88d13b06982910ab5aa 270 Pfam PF03807 NADP oxidoreductase coenzyme F420-dependent 2 95 1.9E-18 T 01-11-2018 IPR028939 Pyrroline-5-carboxylate reductase, catalytic, N-terminal CDA09_18765 4b47725c3d72f88d13b06982910ab5aa 270 SUPERFAMILY SSF48179 158 266 3.23E-33 T 01-11-2018 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily GO:0055114 CDA09_18765 4b47725c3d72f88d13b06982910ab5aa 270 ProSitePatterns PS00521 Delta 1-pyrroline-5-carboxylate reductase signature. 218 241 - T 01-11-2018 IPR000304 Pyrroline-5-carboxylate reductase GO:0004735|GO:0006561|GO:0055114 KEGG: 00330+1.5.1.2|MetaCyc: PWY-3341|MetaCyc: PWY-4981|MetaCyc: PWY-6344|Reactome: R-HSA-70614 CDA09_18765 4b47725c3d72f88d13b06982910ab5aa 270 Hamap MF_01925 Pyrroline-5-carboxylate reductase [proC]. 1 263 26.488 T 01-11-2018 IPR000304 Pyrroline-5-carboxylate reductase GO:0004735|GO:0006561|GO:0055114 KEGG: 00330+1.5.1.2|MetaCyc: PWY-3341|MetaCyc: PWY-4981|MetaCyc: PWY-6344|Reactome: R-HSA-70614 CDA09_18765 4b47725c3d72f88d13b06982910ab5aa 270 Gene3D G3DSA:1.10.3730.10 161 267 5.4E-38 T 01-11-2018 CDA09_12660 3e5289bc17772f5975bebc713636ce7a 562 SUPERFAMILY SSF56112 101 437 4.31E-30 T 01-11-2018 IPR011009 Protein kinase-like domain superfamily CDA09_12660 3e5289bc17772f5975bebc713636ce7a 562 Pfam PF03109 ABC1 family 118 237 2.7E-32 T 01-11-2018 IPR004147 UbiB domain CDA09_12660 3e5289bc17772f5975bebc713636ce7a 562 Gene3D G3DSA:3.90.1200.10 255 385 3.2E-5 T 01-11-2018 CDA09_04345 7644984ecece706309d8d9249265af82 253 PRINTS PR01840 Bacterial Sec-independent translocation TatC protein family signature 153 181 3.0E-46 T 01-11-2018 IPR002033 Sec-independent periplasmic protein translocase TatC GO:0016021 CDA09_04345 7644984ecece706309d8d9249265af82 253 PRINTS PR01840 Bacterial Sec-independent translocation TatC protein family signature 7 34 3.0E-46 T 01-11-2018 IPR002033 Sec-independent periplasmic protein translocase TatC GO:0016021 CDA09_04345 7644984ecece706309d8d9249265af82 253 PRINTS PR01840 Bacterial Sec-independent translocation TatC protein family signature 84 102 3.0E-46 T 01-11-2018 IPR002033 Sec-independent periplasmic protein translocase TatC GO:0016021 CDA09_04345 7644984ecece706309d8d9249265af82 253 PRINTS PR01840 Bacterial Sec-independent translocation TatC protein family signature 102 128 3.0E-46 T 01-11-2018 IPR002033 Sec-independent periplasmic protein translocase TatC GO:0016021 CDA09_04345 7644984ecece706309d8d9249265af82 253 TIGRFAM TIGR00945 tatC: twin arginine-targeting protein translocase TatC 9 225 8.0E-68 T 01-11-2018 IPR002033 Sec-independent periplasmic protein translocase TatC GO:0016021 CDA09_04345 7644984ecece706309d8d9249265af82 253 Hamap MF_00902 Sec-independent protein translocase protein TatC [tatC]. 6 237 16.314 T 01-11-2018 IPR002033 Sec-independent periplasmic protein translocase TatC GO:0016021 CDA09_04345 7644984ecece706309d8d9249265af82 253 Pfam PF00902 Sec-independent protein translocase protein (TatC) 11 220 2.9E-66 T 01-11-2018 IPR002033 Sec-independent periplasmic protein translocase TatC GO:0016021 CDA09_12955 46fbdf8cc09786f8990014748fb47dc0 474 Gene3D G3DSA:3.40.50.450 133 464 4.9E-117 T 01-11-2018 CDA09_12955 46fbdf8cc09786f8990014748fb47dc0 474 SUPERFAMILY SSF102405 132 341 4.88E-41 T 01-11-2018 CDA09_12955 46fbdf8cc09786f8990014748fb47dc0 474 Gene3D G3DSA:3.30.1850.10 10 127 1.3E-43 T 01-11-2018 IPR037153 Pyrimidine/purine nucleotide 5'-monophosphate nucleosidase YgdH-like superfamily KEGG: 00230+3.2.2.4|KEGG: 00240+3.2.2.10|MetaCyc: PWY-6617|MetaCyc: PWY-7569|MetaCyc: PWY-7570 CDA09_12955 46fbdf8cc09786f8990014748fb47dc0 474 Pfam PF14793 Domain of unknown function (DUF4478) 14 120 2.8E-45 T 01-11-2018 IPR027820 Pyrimidine/purine nucleotide 5'-monophosphate nucleosidase YgdH, N-terminal KEGG: 00230+3.2.2.4|KEGG: 00240+3.2.2.10|MetaCyc: PWY-6617|MetaCyc: PWY-7569|MetaCyc: PWY-7570 CDA09_12955 46fbdf8cc09786f8990014748fb47dc0 474 Pfam PF11892 Domain of unknown function (DUF3412) 346 464 4.0E-55 T 01-11-2018 IPR021826 Domain of unknown function DUF3412 KEGG: 00230+3.2.2.4|KEGG: 00240+3.2.2.10|MetaCyc: PWY-6617|MetaCyc: PWY-7569|MetaCyc: PWY-7570 CDA09_12955 46fbdf8cc09786f8990014748fb47dc0 474 Pfam PF03641 Possible lysine decarboxylase 202 341 7.8E-30 T 01-11-2018 IPR031100 LOG family CDA09_19215 147ebdbc2c0b2d1ed0fdec9af4704293 522 SUPERFAMILY SSF47384 304 372 2.35E-13 T 01-11-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 CDA09_19215 147ebdbc2c0b2d1ed0fdec9af4704293 522 Pfam PF13188 PAS domain 197 230 2.7E-4 T 01-11-2018 IPR000014 PAS domain CDA09_19215 147ebdbc2c0b2d1ed0fdec9af4704293 522 Gene3D G3DSA:1.10.287.130 298 372 6.2E-16 T 01-11-2018 CDA09_19215 147ebdbc2c0b2d1ed0fdec9af4704293 522 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 416 513 5.0E-16 T 01-11-2018 IPR003594 Histidine kinase/HSP90-like ATPase CDA09_19215 147ebdbc2c0b2d1ed0fdec9af4704293 522 PRINTS PR00344 Bacterial sensor protein C-terminal signature 472 482 3.5E-10 T 01-11-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 CDA09_19215 147ebdbc2c0b2d1ed0fdec9af4704293 522 PRINTS PR00344 Bacterial sensor protein C-terminal signature 454 468 3.5E-10 T 01-11-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 CDA09_19215 147ebdbc2c0b2d1ed0fdec9af4704293 522 PRINTS PR00344 Bacterial sensor protein C-terminal signature 483 501 3.5E-10 T 01-11-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 CDA09_19215 147ebdbc2c0b2d1ed0fdec9af4704293 522 SUPERFAMILY SSF55785 184 228 9.54E-5 T 01-11-2018 IPR035965 PAS domain superfamily CDA09_19215 147ebdbc2c0b2d1ed0fdec9af4704293 522 Gene3D G3DSA:3.30.565.10 379 521 5.2E-29 T 01-11-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily CDA09_19215 147ebdbc2c0b2d1ed0fdec9af4704293 522 Pfam PF00512 His Kinase A (phospho-acceptor) domain 309 373 6.1E-15 T 01-11-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 CDA09_19215 147ebdbc2c0b2d1ed0fdec9af4704293 522 Gene3D G3DSA:3.30.450.20 172 260 4.5E-5 T 01-11-2018 CDA09_19215 147ebdbc2c0b2d1ed0fdec9af4704293 522 SUPERFAMILY SSF55874 364 516 1.24E-30 T 01-11-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily CDA09_19215 147ebdbc2c0b2d1ed0fdec9af4704293 522 SMART SM00387 415 522 1.6E-28 T 01-11-2018 IPR003594 Histidine kinase/HSP90-like ATPase CDA09_19215 147ebdbc2c0b2d1ed0fdec9af4704293 522 SMART SM00388 309 374 3.6E-14 T 01-11-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 CDA09_20300 a340209ea769d494680edf27707d0755 394 TIGRFAM TIGR00016 ackA: acetate kinase 2 388 4.9E-110 T 01-11-2018 IPR004372 Acetate/propionate kinase GO:0006082|GO:0016301|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497 CDA09_20300 a340209ea769d494680edf27707d0755 394 Gene3D G3DSA:3.30.420.40 1 197 6.1E-59 T 01-11-2018 CDA09_20300 a340209ea769d494680edf27707d0755 394 SUPERFAMILY SSF53067 162 391 3.19E-76 T 01-11-2018 CDA09_20300 a340209ea769d494680edf27707d0755 394 Hamap MF_00020 Acetate kinase [ackA]. 1 394 159.717 T 01-11-2018 IPR004372 Acetate/propionate kinase GO:0006082|GO:0016301|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497 CDA09_20300 a340209ea769d494680edf27707d0755 394 PRINTS PR00471 Acetate kinase family signature 373 385 1.3E-40 T 01-11-2018 IPR000890 Aliphatic acid kinase, short-chain GO:0005622|GO:0016301|GO:0016310|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497 CDA09_20300 a340209ea769d494680edf27707d0755 394 PRINTS PR00471 Acetate kinase family signature 205 226 1.3E-40 T 01-11-2018 IPR000890 Aliphatic acid kinase, short-chain GO:0005622|GO:0016301|GO:0016310|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497 CDA09_20300 a340209ea769d494680edf27707d0755 394 PRINTS PR00471 Acetate kinase family signature 176 189 1.3E-40 T 01-11-2018 IPR000890 Aliphatic acid kinase, short-chain GO:0005622|GO:0016301|GO:0016310|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497 CDA09_20300 a340209ea769d494680edf27707d0755 394 PRINTS PR00471 Acetate kinase family signature 4 15 1.3E-40 T 01-11-2018 IPR000890 Aliphatic acid kinase, short-chain GO:0005622|GO:0016301|GO:0016310|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497 CDA09_20300 a340209ea769d494680edf27707d0755 394 PRINTS PR00471 Acetate kinase family signature 321 337 1.3E-40 T 01-11-2018 IPR000890 Aliphatic acid kinase, short-chain GO:0005622|GO:0016301|GO:0016310|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497 CDA09_20300 a340209ea769d494680edf27707d0755 394 PRINTS PR00471 Acetate kinase family signature 299 312 1.3E-40 T 01-11-2018 IPR000890 Aliphatic acid kinase, short-chain GO:0005622|GO:0016301|GO:0016310|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497 CDA09_20300 a340209ea769d494680edf27707d0755 394 SUPERFAMILY SSF53067 1 198 1.07E-58 T 01-11-2018 CDA09_20300 a340209ea769d494680edf27707d0755 394 ProSitePatterns PS01076 Acetate and butyrate kinases family signature 2. 205 222 - T 01-11-2018 IPR023865 Aliphatic acid kinase, short-chain, conserved site GO:0016301|GO:0016310|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497 CDA09_20300 a340209ea769d494680edf27707d0755 394 ProSitePatterns PS01075 Acetate and butyrate kinases family signature 1. 4 15 - T 01-11-2018 IPR023865 Aliphatic acid kinase, short-chain, conserved site GO:0016301|GO:0016310|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497 CDA09_20300 a340209ea769d494680edf27707d0755 394 Pfam PF00871 Acetokinase family 4 386 3.9E-107 T 01-11-2018 IPR000890 Aliphatic acid kinase, short-chain GO:0005622|GO:0016301|GO:0016310|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497 CDA09_20300 a340209ea769d494680edf27707d0755 394 PIRSF PIRSF000722 1 394 4.5E-135 T 01-11-2018 IPR004372 Acetate/propionate kinase GO:0006082|GO:0016301|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497 CDA09_20300 a340209ea769d494680edf27707d0755 394 Gene3D G3DSA:3.30.420.40 199 393 2.8E-70 T 01-11-2018 CDA09_19805 fc895a686afb4046a64f5a83df33091b 245 SUPERFAMILY SSF52172 6 130 6.26E-36 T 01-11-2018 IPR011006 CheY-like superfamily CDA09_19805 fc895a686afb4046a64f5a83df33091b 245 SMART SM00862 165 238 2.9E-20 T 01-11-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 CDA09_19805 fc895a686afb4046a64f5a83df33091b 245 Pfam PF00486 Transcriptional regulatory protein, C terminal 166 238 4.3E-19 T 01-11-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 CDA09_19805 fc895a686afb4046a64f5a83df33091b 245 SUPERFAMILY SSF46894 141 239 4.82E-23 T 01-11-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 CDA09_19805 fc895a686afb4046a64f5a83df33091b 245 Gene3D G3DSA:1.10.10.10 134 243 7.9E-29 T 01-11-2018 IPR036388 Winged helix-like DNA-binding domain superfamily CDA09_19805 fc895a686afb4046a64f5a83df33091b 245 Pfam PF00072 Response regulator receiver domain 11 120 1.0E-22 T 01-11-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 CDA09_19805 fc895a686afb4046a64f5a83df33091b 245 Gene3D G3DSA:3.40.50.2300 1 133 1.2E-31 T 01-11-2018 CDA09_19805 fc895a686afb4046a64f5a83df33091b 245 SMART SM00448 9 119 5.0E-35 T 01-11-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 CDA09_06170 f5c3cd307e598bc3b1ca7bc02ecdd48a 163 Pfam PF06271 RDD family 30 156 5.9E-20 T 01-11-2018 IPR010432 RDD CDA09_07265 93a1959e880a7bc86e499a91907bbdfa 180 Gene3D G3DSA:1.20.120.700 4 171 2.1E-14 T 01-11-2018 CDA09_07265 93a1959e880a7bc86e499a91907bbdfa 180 SUPERFAMILY SSF89155 2 169 4.58E-31 T 01-11-2018 IPR036411 TorD-like superfamily CDA09_07265 93a1959e880a7bc86e499a91907bbdfa 180 TIGRFAM TIGR00684 narJ: nitrate reductase molybdenum cofactor assembly chaperone 10 168 5.1E-27 T 01-11-2018 IPR003765 Nitrate reductase chaperone, NarJ GO:0051082|GO:0051131 CDA09_07265 93a1959e880a7bc86e499a91907bbdfa 180 Pfam PF02613 Nitrate reductase delta subunit 48 164 2.1E-12 T 01-11-2018 IPR020945 DMSO/Nitrate reductase chaperone CDA09_07265 93a1959e880a7bc86e499a91907bbdfa 180 Gene3D G3DSA:1.10.4070.10 77 158 2.1E-14 T 01-11-2018 CDA09_20530 ef0530572c79360fa9d4ae157f8f30b8 666 Pfam PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain 488 578 3.3E-24 T 01-11-2018 IPR006108 3-hydroxyacyl-CoA dehydrogenase, C-terminal GO:0003857|GO:0006631|GO:0016491|GO:0055114 KEGG: 00062+4.2.1.17+1.1.1.35|KEGG: 00071+4.2.1.17+1.1.1.35|KEGG: 00120+1.1.1.35|KEGG: 00280+4.2.1.17+1.1.1.35|KEGG: 00281+4.2.1.17+1.1.1.35|KEGG: 00310+4.2.1.17+1.1.1.35|KEGG: 00360+4.2.1.17|KEGG: 00362+4.2.1.17+1.1.1.35|KEGG: 00380+4.2.1.17+1.1.1.35|KEGG: 00410+4.2.1.17|KEGG: 00592+4.2.1.17|KEGG: 00623+1.1.1.35|KEGG: 00627+4.2.1.17|KEGG: 00640+4.2.1.17|KEGG: 00650+4.2.1.17+1.1.1.35|KEGG: 00720+4.2.1.17+1.1.1.35|KEGG: 00903+4.2.1.17|KEGG: 00930+4.2.1.17+1.1.1.35|MetaCyc: PWY-1361|MetaCyc: PWY-5109|MetaCyc: PWY-5136|MetaCyc: PWY-5138|MetaCyc: PWY-5177|MetaCyc: PWY-5789|MetaCyc: PWY-6435|MetaCyc: PWY-6583|MetaCyc: PWY-6863|MetaCyc: PWY-6883|MetaCyc: PWY-6944|MetaCyc: PWY-6945|MetaCyc: PWY-6946|MetaCyc: PWY-7007|MetaCyc: PWY-7046|MetaCyc: PWY-7094|MetaCyc: PWY-7216|MetaCyc: PWY-735|MetaCyc: PWY-7401|MetaCyc: PWY-7606|MetaCyc: PWY-7654|MetaCyc: PWY-7656|MetaCyc: PWY-7726|MetaCyc: PWY-7778|MetaCyc: PWY-7779 CDA09_20530 ef0530572c79360fa9d4ae157f8f30b8 666 Pfam PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain 310 484 3.6E-49 T 01-11-2018 IPR006176 3-hydroxyacyl-CoA dehydrogenase, NAD binding GO:0003857|GO:0006631|GO:0016491|GO:0055114 KEGG: 00062+4.2.1.17+1.1.1.35|KEGG: 00071+4.2.1.17+1.1.1.35|KEGG: 00120+1.1.1.35|KEGG: 00280+4.2.1.17+1.1.1.35|KEGG: 00281+4.2.1.17+1.1.1.35|KEGG: 00310+4.2.1.17+1.1.1.35|KEGG: 00360+4.2.1.17|KEGG: 00362+4.2.1.17+1.1.1.35|KEGG: 00380+4.2.1.17+1.1.1.35|KEGG: 00410+4.2.1.17|KEGG: 00592+4.2.1.17|KEGG: 00623+1.1.1.35|KEGG: 00627+4.2.1.17|KEGG: 00640+4.2.1.17|KEGG: 00650+4.2.1.17+1.1.1.35|KEGG: 00720+4.2.1.17+1.1.1.35|KEGG: 00903+4.2.1.17|KEGG: 00930+4.2.1.17+1.1.1.35|MetaCyc: PWY-1361|MetaCyc: PWY-5109|MetaCyc: PWY-5136|MetaCyc: PWY-5138|MetaCyc: PWY-5177|MetaCyc: PWY-5789|MetaCyc: PWY-6435|MetaCyc: PWY-6583|MetaCyc: PWY-6863|MetaCyc: PWY-6883|MetaCyc: PWY-6944|MetaCyc: PWY-6945|MetaCyc: PWY-6946|MetaCyc: PWY-7007|MetaCyc: PWY-7046|MetaCyc: PWY-7094|MetaCyc: PWY-7216|MetaCyc: PWY-735|MetaCyc: PWY-7401|MetaCyc: PWY-7606|MetaCyc: PWY-7654|MetaCyc: PWY-7656|MetaCyc: PWY-7726|MetaCyc: PWY-7778|MetaCyc: PWY-7779 CDA09_20530 ef0530572c79360fa9d4ae157f8f30b8 666 Pfam PF00378 Enoyl-CoA hydratase/isomerase 20 206 2.7E-33 T 01-11-2018 IPR001753 Enoyl-CoA hydratase/isomerase GO:0003824 CDA09_20530 ef0530572c79360fa9d4ae157f8f30b8 666 SUPERFAMILY SSF52096 18 299 6.47E-58 T 01-11-2018 IPR029045 ClpP/crotonase-like domain superfamily CDA09_20530 ef0530572c79360fa9d4ae157f8f30b8 666 Gene3D G3DSA:1.10.1040.50 491 654 1.2E-43 T 01-11-2018 CDA09_20530 ef0530572c79360fa9d4ae157f8f30b8 666 SUPERFAMILY SSF48179 487 584 3.91E-29 T 01-11-2018 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily GO:0055114 CDA09_20530 ef0530572c79360fa9d4ae157f8f30b8 666 Gene3D G3DSA:3.90.226.10 11 303 6.5E-74 T 01-11-2018 CDA09_20530 ef0530572c79360fa9d4ae157f8f30b8 666 Gene3D G3DSA:3.40.50.720 304 490 2.6E-55 T 01-11-2018 CDA09_20530 ef0530572c79360fa9d4ae157f8f30b8 666 SUPERFAMILY SSF48179 591 648 1.02E-9 T 01-11-2018 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily GO:0055114 CDA09_20530 ef0530572c79360fa9d4ae157f8f30b8 666 SUPERFAMILY SSF51735 309 486 6.1E-47 T 01-11-2018 IPR036291 NAD(P)-binding domain superfamily CDA09_15970 a1d670d2679b0cc962495ec196f88622 146 ProSitePatterns PS00194 Thioredoxin family active site. 62 80 - T 01-11-2018 IPR017937 Thioredoxin, conserved site GO:0045454 CDA09_15970 a1d670d2679b0cc962495ec196f88622 146 Pfam PF00085 Thioredoxin 43 142 1.9E-30 T 01-11-2018 IPR013766 Thioredoxin domain GO:0045454 CDA09_15970 a1d670d2679b0cc962495ec196f88622 146 PIRSF PIRSF000077 39 145 2.5E-34 T 01-11-2018 IPR005746 Thioredoxin GO:0006662|GO:0015035|GO:0045454 CDA09_15970 a1d670d2679b0cc962495ec196f88622 146 SUPERFAMILY SSF52833 29 144 2.32E-38 T 01-11-2018 IPR036249 Thioredoxin-like superfamily CDA09_15970 a1d670d2679b0cc962495ec196f88622 146 TIGRFAM TIGR01068 thioredoxin: thioredoxin 46 143 1.1E-34 T 01-11-2018 IPR005746 Thioredoxin GO:0006662|GO:0015035|GO:0045454 CDA09_15970 a1d670d2679b0cc962495ec196f88622 146 Gene3D G3DSA:3.40.30.10 40 146 3.2E-33 T 01-11-2018 CDA09_15970 a1d670d2679b0cc962495ec196f88622 146 Gene3D G3DSA:2.20.28.140 3 39 5.0E-14 T 01-11-2018 CDA09_15970 a1d670d2679b0cc962495ec196f88622 146 PRINTS PR00421 Thioredoxin family signature 109 120 1.9E-9 T 01-11-2018 CDA09_15970 a1d670d2679b0cc962495ec196f88622 146 PRINTS PR00421 Thioredoxin family signature 61 69 1.9E-9 T 01-11-2018 CDA09_15970 a1d670d2679b0cc962495ec196f88622 146 PRINTS PR00421 Thioredoxin family signature 69 78 1.9E-9 T 01-11-2018 CDA09_21330 2dc0b7f3ae5fdfe614f8850a873a852b 198 Hamap MF_01405 dITP/XTP pyrophosphatase. 3 195 46.549 T 01-11-2018 IPR020922 dITP/XTP pyrophosphatase GO:0009143|GO:0017111 KEGG: 00230+3.6.1.66 CDA09_21330 2dc0b7f3ae5fdfe614f8850a873a852b 198 Pfam PF01725 Ham1 family 5 191 6.3E-51 T 01-11-2018 IPR002637 Ham1-like protein GO:0009143|GO:0047429 KEGG: 00230+3.6.1.66|Reactome: R-HSA-74259 CDA09_21330 2dc0b7f3ae5fdfe614f8850a873a852b 198 Gene3D G3DSA:3.90.950.10 1 196 1.0E-69 T 01-11-2018 IPR029001 Inosine triphosphate pyrophosphatase-like CDA09_21330 2dc0b7f3ae5fdfe614f8850a873a852b 198 SUPERFAMILY SSF52972 3 193 2.04E-67 T 01-11-2018 IPR029001 Inosine triphosphate pyrophosphatase-like CDA09_21330 2dc0b7f3ae5fdfe614f8850a873a852b 198 TIGRFAM TIGR00042 TIGR00042: non-canonical purine NTP pyrophosphatase, RdgB/HAM1 family 5 193 1.2E-48 T 01-11-2018 IPR002637 Ham1-like protein GO:0009143|GO:0047429 KEGG: 00230+3.6.1.66|Reactome: R-HSA-74259 CDA09_12390 6d9a6c4af97167ce057485849475e1ed 281 SUPERFAMILY SSF53335 9 279 1.11E-94 T 01-11-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase CDA09_12390 6d9a6c4af97167ce057485849475e1ed 281 Gene3D G3DSA:3.40.50.150 1 281 1.9E-110 T 01-11-2018 CDA09_12390 6d9a6c4af97167ce057485849475e1ed 281 Hamap MF_00934 Ribosomal RNA large subunit methyltransferase J [rlmJ]. 2 268 40.826 T 01-11-2018 IPR007473 Ribosomal RNA large subunit methyltransferase J GO:0008649|GO:0070475 CDA09_12390 6d9a6c4af97167ce057485849475e1ed 281 Pfam PF04378 Ribosomal RNA large subunit methyltransferase D, RlmJ 33 275 4.2E-77 T 01-11-2018 IPR007473 Ribosomal RNA large subunit methyltransferase J GO:0008649|GO:0070475 CDA09_00335 7b2143f98990c89bd659adc708192018 220 Pfam PF02613 Nitrate reductase delta subunit 63 181 9.6E-29 T 01-11-2018 IPR020945 DMSO/Nitrate reductase chaperone CDA09_00335 7b2143f98990c89bd659adc708192018 220 SUPERFAMILY SSF89155 21 213 1.57E-47 T 01-11-2018 IPR036411 TorD-like superfamily CDA09_00335 7b2143f98990c89bd659adc708192018 220 Gene3D G3DSA:1.10.3480.10 21 216 1.5E-36 T 01-11-2018 CDA09_06480 6b93591c22260fe7fe54c55ea772a851 118 SUPERFAMILY SSF47473 48 102 3.32E-10 T 01-11-2018 IPR011992 EF-hand domain pair CDA09_06480 6b93591c22260fe7fe54c55ea772a851 118 Pfam PF13202 EF hand 54 73 1.3E-4 T 01-11-2018 IPR002048 EF-hand domain GO:0005509 CDA09_06480 6b93591c22260fe7fe54c55ea772a851 118 Pfam PF13202 EF hand 81 98 4.1E-4 T 01-11-2018 IPR002048 EF-hand domain GO:0005509 CDA09_06480 6b93591c22260fe7fe54c55ea772a851 118 ProSitePatterns PS00018 EF-hand calcium-binding domain. 85 97 - T 01-11-2018 IPR018247 EF-Hand 1, calcium-binding site CDA09_06480 6b93591c22260fe7fe54c55ea772a851 118 Gene3D G3DSA:1.10.238.10 45 109 4.5E-12 T 01-11-2018 CDA09_05385 1ac05dc676a50bdba5e52b815892e5b4 463 Gene3D G3DSA:3.40.120.10 4 154 1.8E-50 T 01-11-2018 CDA09_05385 1ac05dc676a50bdba5e52b815892e5b4 463 Pfam PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain 374 453 3.3E-12 T 01-11-2018 IPR005843 Alpha-D-phosphohexomutase, C-terminal GO:0016868|GO:0071704 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 CDA09_05385 1ac05dc676a50bdba5e52b815892e5b4 463 Gene3D G3DSA:3.40.120.10 174 251 6.4E-36 T 01-11-2018 CDA09_05385 1ac05dc676a50bdba5e52b815892e5b4 463 Pfam PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I 13 137 4.0E-31 T 01-11-2018 IPR005844 Alpha-D-phosphohexomutase, alpha/beta/alpha domain I GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 CDA09_05385 1ac05dc676a50bdba5e52b815892e5b4 463 Pfam PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II 162 255 1.6E-28 T 01-11-2018 IPR005845 Alpha-D-phosphohexomutase, alpha/beta/alpha domain II GO:0005975 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 CDA09_05385 1ac05dc676a50bdba5e52b815892e5b4 463 PRINTS PR00509 Phosphoglucomutase/phosphomannomutase family signature 235 250 3.5E-24 T 01-11-2018 IPR005841 Alpha-D-phosphohexomutase superfamily GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 CDA09_05385 1ac05dc676a50bdba5e52b815892e5b4 463 PRINTS PR00509 Phosphoglucomutase/phosphomannomutase family signature 206 219 3.5E-24 T 01-11-2018 IPR005841 Alpha-D-phosphohexomutase superfamily GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 CDA09_05385 1ac05dc676a50bdba5e52b815892e5b4 463 PRINTS PR00509 Phosphoglucomutase/phosphomannomutase family signature 101 115 3.5E-24 T 01-11-2018 IPR005841 Alpha-D-phosphohexomutase superfamily GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 CDA09_05385 1ac05dc676a50bdba5e52b815892e5b4 463 PRINTS PR00509 Phosphoglucomutase/phosphomannomutase family signature 172 191 3.5E-24 T 01-11-2018 IPR005841 Alpha-D-phosphohexomutase superfamily GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 CDA09_05385 1ac05dc676a50bdba5e52b815892e5b4 463 Gene3D G3DSA:3.40.120.10 252 369 9.6E-40 T 01-11-2018 CDA09_05385 1ac05dc676a50bdba5e52b815892e5b4 463 SUPERFAMILY SSF53738 156 257 3.88E-34 T 01-11-2018 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 CDA09_05385 1ac05dc676a50bdba5e52b815892e5b4 463 SUPERFAMILY SSF53738 13 145 5.89E-37 T 01-11-2018 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 CDA09_05385 1ac05dc676a50bdba5e52b815892e5b4 463 Gene3D G3DSA:3.30.310.50 370 463 2.2E-26 T 01-11-2018 CDA09_05385 1ac05dc676a50bdba5e52b815892e5b4 463 SUPERFAMILY SSF53738 260 356 3.81E-30 T 01-11-2018 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 CDA09_05385 1ac05dc676a50bdba5e52b815892e5b4 463 Pfam PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III 260 366 3.5E-19 T 01-11-2018 IPR005846 Alpha-D-phosphohexomutase, alpha/beta/alpha domain III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 CDA09_05385 1ac05dc676a50bdba5e52b815892e5b4 463 SUPERFAMILY SSF55957 368 463 2.2E-22 T 01-11-2018 IPR036900 Alpha-D-phosphohexomutase, C-terminal domain superfamily GO:0016868|GO:0071704 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 CDA09_15330 0fc36b00ad7ebf67fcab40e0c2bf0ca1 319 Gene3D G3DSA:3.10.290.10 11 74 4.2E-13 T 01-11-2018 IPR036986 RNA-binding S4 domain superfamily GO:0003723 CDA09_15330 0fc36b00ad7ebf67fcab40e0c2bf0ca1 319 Gene3D G3DSA:3.30.2350.10 91 313 8.3E-75 T 01-11-2018 CDA09_15330 0fc36b00ad7ebf67fcab40e0c2bf0ca1 319 Pfam PF00849 RNA pseudouridylate synthase 99 247 1.5E-27 T 01-11-2018 IPR006145 Pseudouridine synthase, RsuA/RluB/C/D/E/F GO:0001522|GO:0003723|GO:0009451|GO:0009982 CDA09_15330 0fc36b00ad7ebf67fcab40e0c2bf0ca1 319 SUPERFAMILY SSF55174 21 72 3.39E-8 T 01-11-2018 CDA09_15330 0fc36b00ad7ebf67fcab40e0c2bf0ca1 319 SUPERFAMILY SSF55120 88 312 5.76E-65 T 01-11-2018 IPR020103 Pseudouridine synthase, catalytic domain superfamily GO:0001522|GO:0003723|GO:0009451|GO:0009982 CDA09_15330 0fc36b00ad7ebf67fcab40e0c2bf0ca1 319 ProSitePatterns PS01129 Rlu family of pseudouridine synthase signature. 137 151 - T 01-11-2018 IPR006224 Pseudouridine synthase, RluC/RluD, conserved site GO:0001522|GO:0003723|GO:0009451|GO:0009982 CDA09_15330 0fc36b00ad7ebf67fcab40e0c2bf0ca1 319 Pfam PF01479 S4 domain 22 68 2.8E-6 T 01-11-2018 IPR002942 RNA-binding S4 domain GO:0003723 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 CDA09_15330 0fc36b00ad7ebf67fcab40e0c2bf0ca1 319 SMART SM00363 22 81 2.1E-6 T 01-11-2018 IPR002942 RNA-binding S4 domain GO:0003723 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 CDA09_15330 0fc36b00ad7ebf67fcab40e0c2bf0ca1 319 TIGRFAM TIGR00005 rluA_subfam: pseudouridine synthase, RluA family 19 308 2.6E-80 T 01-11-2018 IPR006225 Pseudouridine synthase, RluC/RluD GO:0001522|GO:0003723|GO:0009451|GO:0009982 CDA09_21995 fb75e513ba91ca2f830cb815325b7a09 144 Pfam PF01796 DUF35 OB-fold domain, acyl-CoA-associated 65 123 2.8E-8 T 01-11-2018 IPR002878 Domain of unknown function DUF35, OB-fold, C-terminal CDA09_21995 fb75e513ba91ca2f830cb815325b7a09 144 Pfam PF12172 Rubredoxin-like zinc ribbon domain (DUF35_N) 33 63 6.4E-7 T 01-11-2018 IPR022002 Domain of unknown function DUF35, rubredoxin-like zinc ribbon domain, N-terminal CDA09_21995 fb75e513ba91ca2f830cb815325b7a09 144 SUPERFAMILY SSF50249 34 129 4.97E-21 T 01-11-2018 IPR012340 Nucleic acid-binding, OB-fold CDA09_14365 78a3818ff501214f624933b34b903850 881 Gene3D G3DSA:3.90.550.10 426 649 1.4E-60 T 01-11-2018 IPR029044 Nucleotide-diphospho-sugar transferases CDA09_14365 78a3818ff501214f624933b34b903850 881 Gene3D G3DSA:3.20.20.80 44 328 1.4E-16 T 01-11-2018 CDA09_14365 78a3818ff501214f624933b34b903850 881 SUPERFAMILY SSF51445 45 316 5.27E-49 T 01-11-2018 IPR017853 Glycoside hydrolase superfamily CDA09_14365 78a3818ff501214f624933b34b903850 881 SUPERFAMILY SSF53448 422 699 1.13E-52 T 01-11-2018 IPR029044 Nucleotide-diphospho-sugar transferases CDA09_14365 78a3818ff501214f624933b34b903850 881 Pfam PF00535 Glycosyl transferase family 2 439 612 5.7E-26 T 01-11-2018 IPR001173 Glycosyltransferase 2-like Reactome: R-HSA-913709 CDA09_01940 af8d5411fd79928729931212d6e2c2b3 226 SUPERFAMILY SSF81452 33 209 1.83E-32 T 01-11-2018 IPR035973 Cytochrome c oxidase subunit III-like superfamily GO:0015002|GO:0016020 Reactome: R-HSA-5628897|Reactome: R-HSA-611105 CDA09_01940 af8d5411fd79928729931212d6e2c2b3 226 Pfam PF00510 Cytochrome c oxidase subunit III 45 207 5.5E-9 T 01-11-2018 IPR000298 Cytochrome c oxidase subunit III-like GO:0015002|GO:0016020 Reactome: R-HSA-5628897|Reactome: R-HSA-611105 CDA09_01940 af8d5411fd79928729931212d6e2c2b3 226 Gene3D G3DSA:1.20.120.80 28 211 1.4E-31 T 01-11-2018 IPR013833 Cytochrome c oxidase, subunit III, 4-helical bundle GO:0004129|GO:0016020|GO:0022904 Reactome: R-HSA-5628897|Reactome: R-HSA-611105 CDA09_19055 8cb07803919ed673edb088d0a310047d 184 Pfam PF00127 Copper binding proteins, plastocyanin/azurin family 63 169 7.8E-7 T 01-11-2018 IPR000923 Blue (type 1) copper domain GO:0005507|GO:0009055 CDA09_19055 8cb07803919ed673edb088d0a310047d 184 SUPERFAMILY SSF49503 59 169 2.95E-29 T 01-11-2018 IPR008972 Cupredoxin CDA09_19055 8cb07803919ed673edb088d0a310047d 184 ProSitePatterns PS00079 Multicopper oxidases signature 1. 146 166 - T 01-11-2018 IPR033138 Multicopper oxidases, conserved site CDA09_19055 8cb07803919ed673edb088d0a310047d 184 Gene3D G3DSA:2.60.40.420 52 170 2.0E-28 T 01-11-2018 IPR008972 Cupredoxin CDA09_06905 1e62bb96149e74e0116d74c7669a2e34 553 SUPERFAMILY SSF51230 3 96 4.84E-23 T 01-11-2018 IPR011053 Single hybrid motif CDA09_06905 1e62bb96149e74e0116d74c7669a2e34 553 SUPERFAMILY SSF47005 244 286 2.88E-12 T 01-11-2018 IPR036625 E3-binding domain superfamily GO:0016746 Reactome: R-HSA-389661 CDA09_06905 1e62bb96149e74e0116d74c7669a2e34 553 Gene3D G3DSA:4.10.320.10 236 288 2.1E-18 T 01-11-2018 IPR036625 E3-binding domain superfamily GO:0016746 Reactome: R-HSA-389661 CDA09_06905 1e62bb96149e74e0116d74c7669a2e34 553 SUPERFAMILY SSF51230 118 208 1.57E-23 T 01-11-2018 IPR011053 Single hybrid motif CDA09_06905 1e62bb96149e74e0116d74c7669a2e34 553 ProSitePatterns PS00189 2-oxo acid dehydrogenases acyltransferase component lipoyl binding site. 142 171 - T 01-11-2018 IPR003016 2-oxo acid dehydrogenase, lipoyl-binding site Reactome: R-HSA-389661 CDA09_06905 1e62bb96149e74e0116d74c7669a2e34 553 Gene3D G3DSA:3.30.559.10 311 553 2.2E-91 T 01-11-2018 IPR023213 Chloramphenicol acetyltransferase-like domain superfamily Reactome: R-HSA-389661 CDA09_06905 1e62bb96149e74e0116d74c7669a2e34 553 Gene3D G3DSA:2.40.50.100 3 81 6.9E-20 T 01-11-2018 CDA09_06905 1e62bb96149e74e0116d74c7669a2e34 553 Gene3D G3DSA:2.40.50.100 118 196 8.7E-21 T 01-11-2018 CDA09_06905 1e62bb96149e74e0116d74c7669a2e34 553 ProSitePatterns PS00189 2-oxo acid dehydrogenases acyltransferase component lipoyl binding site. 28 57 - T 01-11-2018 IPR003016 2-oxo acid dehydrogenase, lipoyl-binding site Reactome: R-HSA-389661 CDA09_06905 1e62bb96149e74e0116d74c7669a2e34 553 Pfam PF02817 e3 binding domain 247 281 1.1E-14 T 01-11-2018 IPR004167 Peripheral subunit-binding domain GO:0016746 Reactome: R-HSA-389661 CDA09_06905 1e62bb96149e74e0116d74c7669a2e34 553 TIGRFAM TIGR01348 PDHac_trf_long: dihydrolipoyllysine-residue acetyltransferase 96 553 3.8E-182 T 01-11-2018 IPR006256 Dihydrolipoamide acetyltransferase pyruvate dehydrogenase complex GO:0004742|GO:0006096|GO:0045254 KEGG: 00010+2.3.1.12|KEGG: 00020+2.3.1.12|KEGG: 00620+2.3.1.12 CDA09_06905 1e62bb96149e74e0116d74c7669a2e34 553 Pfam PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) 326 553 1.1E-77 T 01-11-2018 IPR001078 2-oxoacid dehydrogenase acyltransferase, catalytic domain GO:0016746 Reactome: R-HSA-389661 CDA09_06905 1e62bb96149e74e0116d74c7669a2e34 553 Pfam PF00364 Biotin-requiring enzyme 120 191 9.7E-21 T 01-11-2018 IPR000089 Biotin/lipoyl attachment CDA09_06905 1e62bb96149e74e0116d74c7669a2e34 553 Pfam PF00364 Biotin-requiring enzyme 6 76 4.4E-20 T 01-11-2018 IPR000089 Biotin/lipoyl attachment CDA09_06905 1e62bb96149e74e0116d74c7669a2e34 553 SUPERFAMILY SSF52777 315 553 9.78E-83 T 01-11-2018 CDA09_00740 d801ff4d5acabe9cb026ca55c2a85c03 235 Pfam PF08843 Nucleotidyl transferase AbiEii toxin, Type IV TA system 45 192 3.8E-5 T 01-11-2018 IPR014942 Nucleotidyl transferase AbiEii toxin, Type IV TA system CDA09_17100 3c0e5b2071de6213910cee5fbf1fb340 831 Gene3D G3DSA:1.20.1640.10 601 800 5.9E-9 T 01-11-2018 CDA09_17100 3c0e5b2071de6213910cee5fbf1fb340 831 SUPERFAMILY SSF82866 624 788 1.96E-27 T 01-11-2018 CDA09_17100 3c0e5b2071de6213910cee5fbf1fb340 831 Pfam PF03176 MMPL family 211 426 5.1E-5 T 01-11-2018 IPR004869 Membrane transport protein MMPL domain GO:0016020 CDA09_17100 3c0e5b2071de6213910cee5fbf1fb340 831 Pfam PF03176 MMPL family 591 787 5.7E-13 T 01-11-2018 IPR004869 Membrane transport protein MMPL domain GO:0016020 CDA09_17100 3c0e5b2071de6213910cee5fbf1fb340 831 SUPERFAMILY SSF82866 204 395 1.06E-23 T 01-11-2018 CDA09_14560 deb5683f6f9fc39303b4c052d65474a7 218 SUPERFAMILY SSF46894 145 214 6.46E-21 T 01-11-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 CDA09_14560 deb5683f6f9fc39303b4c052d65474a7 218 SMART SM00421 151 208 2.8E-21 T 01-11-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 CDA09_14560 deb5683f6f9fc39303b4c052d65474a7 218 SMART SM00448 6 119 7.2E-23 T 01-11-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 CDA09_14560 deb5683f6f9fc39303b4c052d65474a7 218 Gene3D G3DSA:3.40.50.12740 6 214 1.1E-58 T 01-11-2018 CDA09_14560 deb5683f6f9fc39303b4c052d65474a7 218 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 184 196 4.7E-13 T 01-11-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 CDA09_14560 deb5683f6f9fc39303b4c052d65474a7 218 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 154 168 4.7E-13 T 01-11-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 CDA09_14560 deb5683f6f9fc39303b4c052d65474a7 218 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 168 184 4.7E-13 T 01-11-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 CDA09_14560 deb5683f6f9fc39303b4c052d65474a7 218 ProSitePatterns PS00622 LuxR-type HTH domain signature. 168 195 - T 01-11-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 CDA09_14560 deb5683f6f9fc39303b4c052d65474a7 218 Pfam PF00072 Response regulator receiver domain 8 119 2.3E-23 T 01-11-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 CDA09_14560 deb5683f6f9fc39303b4c052d65474a7 218 SUPERFAMILY SSF52172 6 131 1.39E-28 T 01-11-2018 IPR011006 CheY-like superfamily CDA09_14560 deb5683f6f9fc39303b4c052d65474a7 218 Pfam PF00196 Bacterial regulatory proteins, luxR family 154 208 8.0E-20 T 01-11-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 CDA09_04325 cb7e37190c9e1fabf89169f0fd43e9c2 108 Gene3D G3DSA:1.10.287.1080 3 96 3.5E-30 T 01-11-2018 CDA09_04325 cb7e37190c9e1fabf89169f0fd43e9c2 108 TIGRFAM TIGR03188 histidine_hisI: phosphoribosyl-ATP diphosphatase 7 89 2.7E-31 T 01-11-2018 IPR008179 Phosphoribosyl-ATP pyrophosphohydrolase GO:0000105|GO:0004636 KEGG: 00340+3.6.1.31 CDA09_04325 cb7e37190c9e1fabf89169f0fd43e9c2 108 SUPERFAMILY SSF101386 6 94 1.14E-25 T 01-11-2018 CDA09_04325 cb7e37190c9e1fabf89169f0fd43e9c2 108 Hamap MF_01020 Phosphoribosyl-ATP pyrophosphatase [hisE]. 4 90 20.148 T 01-11-2018 IPR008179 Phosphoribosyl-ATP pyrophosphohydrolase GO:0000105|GO:0004636 KEGG: 00340+3.6.1.31 CDA09_04325 cb7e37190c9e1fabf89169f0fd43e9c2 108 Pfam PF01503 Phosphoribosyl-ATP pyrophosphohydrolase 8 93 2.4E-17 T 01-11-2018 IPR021130 Phosphoribosyl-ATP pyrophosphohydrolase-like KEGG: 00340+3.6.1.31 CDA09_05245 23ffa1f5932ef1861d8f2a1fda15d2b6 330 SUPERFAMILY SSF102114 23 329 1.83E-90 T 01-11-2018 CDA09_05245 23ffa1f5932ef1861d8f2a1fda15d2b6 330 Pfam PF04055 Radical SAM superfamily 67 212 1.1E-15 T 01-11-2018 IPR007197 Radical SAM GO:0003824|GO:0051536 CDA09_05245 23ffa1f5932ef1861d8f2a1fda15d2b6 330 Pfam PF06968 Biotin and Thiamin Synthesis associated domain 237 327 7.8E-20 T 01-11-2018 IPR010722 Biotin and thiamin synthesis-associated domain KEGG: 00780+2.8.1.6|MetaCyc: PWY-7380 CDA09_05245 23ffa1f5932ef1861d8f2a1fda15d2b6 330 SMART SM00729 60 272 2.7E-40 T 01-11-2018 IPR006638 Elp3/MiaB/NifB GO:0003824|GO:0051536 CDA09_05245 23ffa1f5932ef1861d8f2a1fda15d2b6 330 Hamap MF_01694 Biotin synthase [bioB]. 22 330 41.973 T 01-11-2018 IPR002684 Biotin synthase/Biotin biosynthesis bifunctional protein BioAB GO:0004076|GO:0009102 KEGG: 00780+2.8.1.6|MetaCyc: PWY-7380 CDA09_05245 23ffa1f5932ef1861d8f2a1fda15d2b6 330 SMART SM00876 237 329 4.5E-48 T 01-11-2018 IPR010722 Biotin and thiamin synthesis-associated domain KEGG: 00780+2.8.1.6|MetaCyc: PWY-7380 CDA09_05245 23ffa1f5932ef1861d8f2a1fda15d2b6 330 PIRSF PIRSF001619 5 330 6.8E-135 T 01-11-2018 IPR024177 Biotin synthase KEGG: 00780+2.8.1.6|MetaCyc: PWY-7380 CDA09_05245 23ffa1f5932ef1861d8f2a1fda15d2b6 330 TIGRFAM TIGR00433 bioB: biotin synthase 32 327 2.0E-123 T 01-11-2018 IPR002684 Biotin synthase/Biotin biosynthesis bifunctional protein BioAB GO:0004076|GO:0009102 KEGG: 00780+2.8.1.6|MetaCyc: PWY-7380 CDA09_05245 23ffa1f5932ef1861d8f2a1fda15d2b6 330 Gene3D G3DSA:3.20.20.70 21 330 1.4E-127 T 01-11-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 CDA09_04275 75038e14667d74a138eb5f7e11675184 420 Hamap MF_00111 UDP-N-acetylglucosamine 1-carboxyvinyltransferase [murA]. 1 419 44.27 T 01-11-2018 IPR005750 UDP-N-acetylglucosamine 1-carboxyvinyltransferase GO:0008760|GO:0019277 KEGG: 00520+2.5.1.7|KEGG: 00550+2.5.1.7|MetaCyc: PWY-6386|MetaCyc: PWY-6387|MetaCyc: PWY-7953 CDA09_04275 75038e14667d74a138eb5f7e11675184 420 Pfam PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) 7 409 4.6E-104 T 01-11-2018 IPR001986 Enolpyruvate transferase domain GO:0016765 CDA09_04275 75038e14667d74a138eb5f7e11675184 420 Gene3D G3DSA:3.65.10.10 21 232 3.2E-162 T 01-11-2018 IPR036968 Enolpyruvate transferase domain superfamily GO:0016765 CDA09_04275 75038e14667d74a138eb5f7e11675184 420 Gene3D G3DSA:3.65.10.10 6 416 3.2E-162 T 01-11-2018 IPR036968 Enolpyruvate transferase domain superfamily GO:0016765 CDA09_04275 75038e14667d74a138eb5f7e11675184 420 SUPERFAMILY SSF55205 1 418 4.58E-135 T 01-11-2018 IPR013792 RNA 3'-terminal phosphate cyclase/enolpyruvate transferase, alpha/beta GO:0003824 CDA09_04275 75038e14667d74a138eb5f7e11675184 420 TIGRFAM TIGR01072 murA: UDP-N-acetylglucosamine 1-carboxyvinyltransferase 1 418 1.7E-172 T 01-11-2018 IPR005750 UDP-N-acetylglucosamine 1-carboxyvinyltransferase GO:0008760|GO:0019277 KEGG: 00520+2.5.1.7|KEGG: 00550+2.5.1.7|MetaCyc: PWY-6386|MetaCyc: PWY-6387|MetaCyc: PWY-7953 CDA09_17880 1b187a28c7e80546cc693a106ee4a582 251 Gene3D G3DSA:1.10.10.60 143 197 2.9E-7 T 01-11-2018 CDA09_17880 1b187a28c7e80546cc693a106ee4a582 251 Pfam PF02311 AraC-like ligand binding domain 16 80 6.2E-14 T 01-11-2018 IPR003313 AraC-type arabinose-binding/dimerisation domain GO:0006355 CDA09_17880 1b187a28c7e80546cc693a106ee4a582 251 Gene3D G3DSA:2.60.120.10 6 84 2.0E-9 T 01-11-2018 IPR014710 RmlC-like jelly roll fold CDA09_17880 1b187a28c7e80546cc693a106ee4a582 251 Pfam PF12833 Helix-turn-helix domain 173 246 1.0E-17 T 01-11-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 CDA09_17880 1b187a28c7e80546cc693a106ee4a582 251 SUPERFAMILY SSF51215 16 81 5.49E-14 T 01-11-2018 IPR037923 Transcription regulator HTH-like CDA09_17880 1b187a28c7e80546cc693a106ee4a582 251 SUPERFAMILY SSF46689 198 246 1.79E-9 T 01-11-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 CDA09_17880 1b187a28c7e80546cc693a106ee4a582 251 SMART SM00342 162 245 1.1E-20 T 01-11-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 CDA09_17880 1b187a28c7e80546cc693a106ee4a582 251 Gene3D G3DSA:1.10.10.60 198 249 1.2E-12 T 01-11-2018 CDA09_06760 87682f25de6638ddc0d08e35200ef6b6 310 Pfam PF00700 Bacterial flagellin C-terminal helical region 227 308 3.3E-7 T 01-11-2018 IPR001029 Flagellin, D0/D1 domain GO:0005198|GO:0071973 CDA09_06760 87682f25de6638ddc0d08e35200ef6b6 310 Gene3D G3DSA:1.20.1330.10 40 255 5.7E-55 T 01-11-2018 CDA09_06760 87682f25de6638ddc0d08e35200ef6b6 310 TIGRFAM TIGR02550 flagell_flgL: flagellar hook-associated protein 3 2 191 6.5E-51 T 01-11-2018 IPR013384 Flagellar hook-associated protein 3 GO:0009424|GO:0071973 CDA09_06760 87682f25de6638ddc0d08e35200ef6b6 310 Pfam PF00669 Bacterial flagellin N-terminal helical region 3 140 7.9E-18 T 01-11-2018 IPR001029 Flagellin, D0/D1 domain GO:0005198|GO:0071973 CDA09_06760 87682f25de6638ddc0d08e35200ef6b6 310 SUPERFAMILY SSF64518 2 308 7.72E-58 T 01-11-2018 CDA09_22825 26103e615f1efe2bfdc8abf39e742400 414 TIGRFAM TIGR00901 2A0125: AmpG-like permease 12 358 1.7E-112 T 01-11-2018 CDA09_22825 26103e615f1efe2bfdc8abf39e742400 414 Gene3D G3DSA:1.20.1250.20 1 185 6.1E-9 T 01-11-2018 CDA09_22825 26103e615f1efe2bfdc8abf39e742400 414 SUPERFAMILY SSF103473 2 400 6.02E-31 T 01-11-2018 IPR036259 MFS transporter superfamily CDA09_22825 26103e615f1efe2bfdc8abf39e742400 414 Gene3D G3DSA:1.20.1250.20 211 404 5.4E-11 T 01-11-2018 CDA09_22825 26103e615f1efe2bfdc8abf39e742400 414 Pfam PF07690 Major Facilitator Superfamily 5 360 1.4E-16 T 01-11-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 CDA09_07800 97f939707afc7c82e9e468f977beb502 945 SUPERFAMILY SSF55785 485 620 4.89E-11 T 01-11-2018 IPR035965 PAS domain superfamily CDA09_07800 97f939707afc7c82e9e468f977beb502 945 Pfam PF00990 Diguanylate cyclase, GGDEF domain 755 925 6.7E-43 T 01-11-2018 IPR000160 GGDEF domain CDA09_07800 97f939707afc7c82e9e468f977beb502 945 Gene3D G3DSA:3.30.450.20 39 183 8.2E-13 T 01-11-2018 CDA09_07800 97f939707afc7c82e9e468f977beb502 945 Pfam PF08448 PAS fold 379 490 7.2E-20 T 01-11-2018 IPR013656 PAS fold-4 CDA09_07800 97f939707afc7c82e9e468f977beb502 945 Pfam PF08448 PAS fold 506 623 3.0E-6 T 01-11-2018 IPR013656 PAS fold-4 CDA09_07800 97f939707afc7c82e9e468f977beb502 945 Gene3D G3DSA:3.30.450.20 631 751 2.0E-39 T 01-11-2018 CDA09_07800 97f939707afc7c82e9e468f977beb502 945 SUPERFAMILY SSF55785 363 486 9.25E-21 T 01-11-2018 IPR035965 PAS domain superfamily CDA09_07800 97f939707afc7c82e9e468f977beb502 945 Gene3D G3DSA:3.30.450.20 498 630 9.3E-12 T 01-11-2018 CDA09_07800 97f939707afc7c82e9e468f977beb502 945 Gene3D G3DSA:3.30.450.20 359 497 1.5E-27 T 01-11-2018 CDA09_07800 97f939707afc7c82e9e468f977beb502 945 SMART SM00267 744 930 6.9E-54 T 01-11-2018 IPR000160 GGDEF domain CDA09_07800 97f939707afc7c82e9e468f977beb502 945 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 634 750 7.5E-24 T 01-11-2018 IPR000014 PAS domain CDA09_07800 97f939707afc7c82e9e468f977beb502 945 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 369 495 9.5E-18 T 01-11-2018 IPR000014 PAS domain CDA09_07800 97f939707afc7c82e9e468f977beb502 945 SMART SM00304 313 366 0.002 T 01-11-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 CDA09_07800 97f939707afc7c82e9e468f977beb502 945 Gene3D G3DSA:3.30.70.270 752 933 1.8E-56 T 01-11-2018 CDA09_07800 97f939707afc7c82e9e468f977beb502 945 SUPERFAMILY SSF55073 760 931 3.77E-45 T 01-11-2018 IPR029787 Nucleotide cyclase CDA09_07800 97f939707afc7c82e9e468f977beb502 945 SUPERFAMILY SSF103190 75 181 1.41E-6 T 01-11-2018 IPR029151 Periplasmic sensor-like domain superfamily CDA09_07800 97f939707afc7c82e9e468f977beb502 945 Pfam PF13426 PAS domain 641 743 4.4E-18 T 01-11-2018 IPR000014 PAS domain CDA09_07800 97f939707afc7c82e9e468f977beb502 945 SMART SM00091 630 696 1.3E-8 T 01-11-2018 IPR000014 PAS domain CDA09_07800 97f939707afc7c82e9e468f977beb502 945 SMART SM00091 373 439 3.7E-6 T 01-11-2018 IPR000014 PAS domain CDA09_07800 97f939707afc7c82e9e468f977beb502 945 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 753 929 7.6E-43 T 01-11-2018 IPR000160 GGDEF domain CDA09_07800 97f939707afc7c82e9e468f977beb502 945 SMART SM00086 702 744 5.2E-8 T 01-11-2018 IPR001610 PAC motif CDA09_07800 97f939707afc7c82e9e468f977beb502 945 SMART SM00086 584 622 430.0 T 01-11-2018 IPR001610 PAC motif CDA09_07800 97f939707afc7c82e9e468f977beb502 945 SMART SM00086 447 488 10.0 T 01-11-2018 IPR001610 PAC motif CDA09_07800 97f939707afc7c82e9e468f977beb502 945 SUPERFAMILY SSF55785 638 741 7.15E-31 T 01-11-2018 IPR035965 PAS domain superfamily CDA09_20945 1100c9e2fb418591e5e0d4ba4c7291d1 262 SUPERFAMILY SSF52467 6 254 1.73E-72 T 01-11-2018 IPR029035 DHS-like NAD/FAD-binding domain superfamily CDA09_20945 1100c9e2fb418591e5e0d4ba4c7291d1 262 Pfam PF02146 Sir2 family 27 201 1.1E-41 T 01-11-2018 IPR003000 Sirtuin family GO:0070403 CDA09_20945 1100c9e2fb418591e5e0d4ba4c7291d1 262 Gene3D G3DSA:3.40.50.1220 18 250 4.0E-65 T 01-11-2018 CDA09_20945 1100c9e2fb418591e5e0d4ba4c7291d1 262 Gene3D G3DSA:3.30.1600.10 36 175 4.0E-65 T 01-11-2018 IPR026591 Sirtuin, catalytic core small domain superfamily CDA09_22695 d43cd1ad84016ddc29912ad0f983acd5 252 SUPERFAMILY SSF52540 4 246 3.74E-58 T 01-11-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CDA09_22695 d43cd1ad84016ddc29912ad0f983acd5 252 SMART SM00382 30 224 9.8E-6 T 01-11-2018 IPR003593 AAA+ ATPase domain CDA09_22695 d43cd1ad84016ddc29912ad0f983acd5 252 Gene3D G3DSA:3.40.50.300 5 251 7.2E-57 T 01-11-2018 CDA09_22695 d43cd1ad84016ddc29912ad0f983acd5 252 Pfam PF00005 ABC transporter 22 176 2.9E-29 T 01-11-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 CDA09_22695 d43cd1ad84016ddc29912ad0f983acd5 252 Pfam PF12399 Branched-chain amino acid ATP-binding cassette transporter 224 246 2.3E-7 T 01-11-2018 IPR032823 Branched-chain amino acid ATP-binding cassette transporter, C-terminal CDA09_02075 137d48a8ab88597db5f88b9e882ab675 269 TIGRFAM TIGR00972 3a0107s01c2: phosphate ABC transporter, ATP-binding protein 23 269 1.1E-116 T 01-11-2018 IPR005670 Phosphate transport system permease protein 1 GO:0005315|GO:0016020|GO:0035435 CDA09_02075 137d48a8ab88597db5f88b9e882ab675 269 Pfam PF00005 ABC transporter 38 194 1.1E-34 T 01-11-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 CDA09_02075 137d48a8ab88597db5f88b9e882ab675 269 SUPERFAMILY SSF52540 22 256 6.83E-61 T 01-11-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CDA09_02075 137d48a8ab88597db5f88b9e882ab675 269 Gene3D G3DSA:3.40.50.300 22 267 3.1E-69 T 01-11-2018 CDA09_02075 137d48a8ab88597db5f88b9e882ab675 269 ProSitePatterns PS00211 ABC transporters family signature. 166 180 - T 01-11-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 CDA09_02075 137d48a8ab88597db5f88b9e882ab675 269 SMART SM00382 47 259 1.6E-15 T 01-11-2018 IPR003593 AAA+ ATPase domain CDA09_13945 09b180ffc8a83cf2d7e8b5d351c8e737 148 Gene3D G3DSA:2.40.50.140 9 128 7.5E-15 T 01-11-2018 CDA09_13945 09b180ffc8a83cf2d7e8b5d351c8e737 148 Pfam PF00436 Single-strand binding protein family 19 101 1.3E-6 T 01-11-2018 IPR000424 Primosome PriB/single-strand DNA-binding GO:0003697 Reactome: R-HSA-2151201 CDA09_13945 09b180ffc8a83cf2d7e8b5d351c8e737 148 SUPERFAMILY SSF50249 13 128 7.2E-15 T 01-11-2018 IPR012340 Nucleic acid-binding, OB-fold CDA09_19070 5c364c12875a01c890dd53ed8db53e56 513 SUPERFAMILY SSF111369 133 340 1.57E-16 T 01-11-2018 CDA09_19070 5c364c12875a01c890dd53ed8db53e56 513 TIGRFAM TIGR01730 RND_mfp: efflux transporter, RND family, MFP subunit 108 405 4.3E-39 T 01-11-2018 IPR006143 RND efflux pump, membrane fusion protein GO:0005215|GO:0016020|GO:0055085 CDA09_19070 5c364c12875a01c890dd53ed8db53e56 513 Gene3D G3DSA:2.40.50.320 430 511 1.7E-19 T 01-11-2018 CDA09_19070 5c364c12875a01c890dd53ed8db53e56 513 Pfam PF00529 HlyD membrane-fusion protein of T1SS 15 400 6.8E-9 T 01-11-2018 IPR006143 RND efflux pump, membrane fusion protein GO:0005215|GO:0016020|GO:0055085 CDA09_19070 5c364c12875a01c890dd53ed8db53e56 513 Gene3D G3DSA:2.40.420.20 109 399 3.3E-66 T 01-11-2018 CDA09_19070 5c364c12875a01c890dd53ed8db53e56 513 Gene3D G3DSA:1.10.287.470 170 222 3.3E-66 T 01-11-2018 CDA09_19070 5c364c12875a01c890dd53ed8db53e56 513 Pfam PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion 118 333 6.8E-72 T 01-11-2018 IPR032317 RND efflux pump, membrane fusion protein, barrel-sandwich domain CDA09_19070 5c364c12875a01c890dd53ed8db53e56 513 Gene3D G3DSA:2.40.50.100 135 259 3.3E-66 T 01-11-2018 CDA09_19070 5c364c12875a01c890dd53ed8db53e56 513 Gene3D G3DSA:2.40.30.170 121 340 3.3E-66 T 01-11-2018 CDA09_19070 5c364c12875a01c890dd53ed8db53e56 513 Pfam PF11604 Copper binding periplasmic protein CusF 437 503 8.8E-22 T 01-11-2018 IPR021647 Copper binding periplasmic protein CusF CDA09_11835 7d37a667cbec51803e0e16fe855c5ae9 173 SMART SM00344 6 115 3.4E-30 T 01-11-2018 IPR019888 Transcription regulator AsnC-type GO:0003700|GO:0005622|GO:0006355|GO:0043565 CDA09_11835 7d37a667cbec51803e0e16fe855c5ae9 173 SUPERFAMILY SSF54909 66 155 8.98E-21 T 01-11-2018 IPR011008 Dimeric alpha-beta barrel CDA09_11835 7d37a667cbec51803e0e16fe855c5ae9 173 Gene3D G3DSA:3.30.70.920 59 156 3.0E-23 T 01-11-2018 CDA09_11835 7d37a667cbec51803e0e16fe855c5ae9 173 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 6 22 5.7E-7 T 01-11-2018 IPR000485 AsnC-type HTH domain GO:0043565 CDA09_11835 7d37a667cbec51803e0e16fe855c5ae9 173 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 33 52 5.7E-7 T 01-11-2018 IPR000485 AsnC-type HTH domain GO:0043565 CDA09_11835 7d37a667cbec51803e0e16fe855c5ae9 173 SUPERFAMILY SSF46785 7 96 4.56E-15 T 01-11-2018 IPR036390 Winged helix DNA-binding domain superfamily CDA09_11835 7d37a667cbec51803e0e16fe855c5ae9 173 Pfam PF13404 AsnC-type helix-turn-helix domain 7 47 6.0E-13 T 01-11-2018 IPR000485 AsnC-type HTH domain GO:0043565 CDA09_11835 7d37a667cbec51803e0e16fe855c5ae9 173 Gene3D G3DSA:1.10.10.10 7 58 4.6E-18 T 01-11-2018 IPR036388 Winged helix-like DNA-binding domain superfamily CDA09_11835 7d37a667cbec51803e0e16fe855c5ae9 173 Pfam PF01037 Lrp/AsnC ligand binding domain 73 146 7.9E-21 T 01-11-2018 IPR019887 Transcription regulator AsnC/Lrp, ligand binding domain CDA09_00810 7f0c343e4c6c6a55fede53e81a175fad 467 ProSitePatterns PS00216 Sugar transport proteins signature 1. 83 99 - T 01-11-2018 IPR005829 Sugar transporter, conserved site GO:0005215|GO:0016021|GO:0055085 CDA09_00810 7f0c343e4c6c6a55fede53e81a175fad 467 Gene3D G3DSA:1.20.1250.20 24 441 8.1E-64 T 01-11-2018 CDA09_00810 7f0c343e4c6c6a55fede53e81a175fad 467 SUPERFAMILY SSF103473 8 444 2.75E-71 T 01-11-2018 IPR036259 MFS transporter superfamily CDA09_00810 7f0c343e4c6c6a55fede53e81a175fad 467 Pfam PF07690 Major Facilitator Superfamily 34 297 1.6E-29 T 01-11-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 CDA09_15125 1c13487551fc1c2e487a86a0e6a73332 89 Pfam PF05101 Type IV secretory pathway, VirB3-like protein 11 85 1.3E-11 T 01-11-2018 IPR007792 Type IV secretion system, VirB3 / TrbD / AvhB CDA09_15125 1c13487551fc1c2e487a86a0e6a73332 89 PIRSF PIRSF017854 5 89 3.4E-34 T 01-11-2018 IPR016704 Conjugal transfer, TrbD CDA09_15125 1c13487551fc1c2e487a86a0e6a73332 89 ProDom PD012561 TRBD PLASMID CONJUGAL TRANSFER PRECURSOR SIGNAL MATING FORMATION PROBABLE PAIR 14 85 0.001 T 01-11-2018 CDA09_00600 a23d9edb8b6017a006db5706b99f7a74 375 Pfam PF07943 Penicillin-binding protein 5, C-terminal domain 267 356 2.4E-22 T 01-11-2018 IPR012907 Peptidase S11, D-Ala-D-Ala carboxypeptidase A, C-terminal GO:0006508|GO:0009002 KEGG: 00550+3.4.16.4|MetaCyc: PWY-5265|MetaCyc: PWY-6471 CDA09_00600 a23d9edb8b6017a006db5706b99f7a74 375 Gene3D G3DSA:3.40.710.10 12 265 3.2E-91 T 01-11-2018 CDA09_00600 a23d9edb8b6017a006db5706b99f7a74 375 Gene3D G3DSA:2.60.410.10 267 356 1.1E-29 T 01-11-2018 IPR037167 D-Ala-D-Ala carboxypeptidase, C-terminal domain superfamily GO:0006508|GO:0009002 KEGG: 00550+3.4.16.4|MetaCyc: PWY-5265|MetaCyc: PWY-6471 CDA09_00600 a23d9edb8b6017a006db5706b99f7a74 375 PRINTS PR00725 D-Ala-D-Ala carboxypeptidase 1 (S11) family signature 54 65 7.3E-18 T 01-11-2018 IPR018044 Peptidase S11, D-alanyl-D-alanine carboxypeptidase A GO:0006508|GO:0009002 CDA09_00600 a23d9edb8b6017a006db5706b99f7a74 375 PRINTS PR00725 D-Ala-D-Ala carboxypeptidase 1 (S11) family signature 134 147 7.3E-18 T 01-11-2018 IPR018044 Peptidase S11, D-alanyl-D-alanine carboxypeptidase A GO:0006508|GO:0009002 CDA09_00600 a23d9edb8b6017a006db5706b99f7a74 375 PRINTS PR00725 D-Ala-D-Ala carboxypeptidase 1 (S11) family signature 107 124 7.3E-18 T 01-11-2018 IPR018044 Peptidase S11, D-alanyl-D-alanine carboxypeptidase A GO:0006508|GO:0009002 CDA09_00600 a23d9edb8b6017a006db5706b99f7a74 375 SUPERFAMILY SSF69189 267 359 4.12E-24 T 01-11-2018 IPR015956 Penicillin-binding protein, C-terminal domain superfamily GO:0004180|GO:0006508 KEGG: 00550+3.4.16.4|MetaCyc: PWY-5265|MetaCyc: PWY-6471 CDA09_00600 a23d9edb8b6017a006db5706b99f7a74 375 SUPERFAMILY SSF56601 3 267 5.25E-86 T 01-11-2018 IPR012338 Beta-lactamase/transpeptidase-like CDA09_00600 a23d9edb8b6017a006db5706b99f7a74 375 Pfam PF00768 D-alanyl-D-alanine carboxypeptidase 23 247 1.7E-80 T 01-11-2018 IPR001967 Peptidase S11, D-alanyl-D-alanine carboxypeptidase A, N-terminal GO:0006508|GO:0009002 CDA09_00600 a23d9edb8b6017a006db5706b99f7a74 375 SMART SM00936 267 357 1.1E-32 T 01-11-2018 IPR012907 Peptidase S11, D-Ala-D-Ala carboxypeptidase A, C-terminal GO:0006508|GO:0009002 KEGG: 00550+3.4.16.4|MetaCyc: PWY-5265|MetaCyc: PWY-6471 CDA09_03000 a688f68d9f3ee99100d6c8c1c2cf1dcd 503 Pfam PF02913 FAD linked oxidases, C-terminal domain 235 474 4.2E-68 T 01-11-2018 IPR004113 FAD-linked oxidase, C-terminal GO:0003824|GO:0050660 CDA09_03000 a688f68d9f3ee99100d6c8c1c2cf1dcd 503 SUPERFAMILY SSF55103 208 478 3.43E-77 T 01-11-2018 IPR016164 FAD-linked oxidase-like, C-terminal GO:0003824|GO:0050660 CDA09_03000 a688f68d9f3ee99100d6c8c1c2cf1dcd 503 Pfam PF01565 FAD binding domain 61 198 8.3E-40 T 01-11-2018 IPR006094 FAD linked oxidase, N-terminal GO:0016491|GO:0050660|GO:0055114 CDA09_03000 a688f68d9f3ee99100d6c8c1c2cf1dcd 503 Gene3D G3DSA:1.10.45.10 436 476 2.3E-7 T 01-11-2018 IPR016171 Vanillyl-alcohol oxidase, C-terminal subdomain 2 CDA09_03000 a688f68d9f3ee99100d6c8c1c2cf1dcd 503 Gene3D G3DSA:3.30.465.40 33 255 3.5E-63 T 01-11-2018 CDA09_03000 a688f68d9f3ee99100d6c8c1c2cf1dcd 503 Gene3D G3DSA:3.30.70.2740 354 435 4.8E-9 T 01-11-2018 CDA09_03000 a688f68d9f3ee99100d6c8c1c2cf1dcd 503 SUPERFAMILY SSF56176 25 235 1.03E-67 T 01-11-2018 IPR036318 FAD-binding, type PCMH-like superfamily GO:0050660 CDA09_15315 7c9e4a32b2a8921be5dec8d4a870f70e 191 TIGRFAM TIGR00172 maf: septum formation protein Maf 2 184 4.5E-48 T 01-11-2018 IPR003697 Maf-like protein GO:0047429 CDA09_15315 7c9e4a32b2a8921be5dec8d4a870f70e 191 Pfam PF02545 Maf-like protein 2 184 3.6E-42 T 01-11-2018 IPR003697 Maf-like protein GO:0047429 CDA09_15315 7c9e4a32b2a8921be5dec8d4a870f70e 191 Hamap MF_00528 Septum formation protein Maf [maf]. 2 190 28.826 T 01-11-2018 IPR003697 Maf-like protein GO:0047429 CDA09_15315 7c9e4a32b2a8921be5dec8d4a870f70e 191 Gene3D G3DSA:3.90.950.10 1 190 2.0E-56 T 01-11-2018 IPR029001 Inosine triphosphate pyrophosphatase-like CDA09_15315 7c9e4a32b2a8921be5dec8d4a870f70e 191 PIRSF PIRSF006305 1 190 1.9E-41 T 01-11-2018 IPR003697 Maf-like protein GO:0047429 CDA09_15315 7c9e4a32b2a8921be5dec8d4a870f70e 191 SUPERFAMILY SSF52972 1 184 5.56E-55 T 01-11-2018 IPR029001 Inosine triphosphate pyrophosphatase-like CDA09_16965 5044bed79218b3b44523a165f56d48d4 283 Gene3D G3DSA:1.10.1040.10 193 278 9.1E-34 T 01-11-2018 IPR013328 6-phosphogluconate dehydrogenase, domain 2 GO:0016491|GO:0055114 CDA09_16965 5044bed79218b3b44523a165f56d48d4 283 Pfam PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain 5 183 7.8E-66 T 01-11-2018 IPR006176 3-hydroxyacyl-CoA dehydrogenase, NAD binding GO:0003857|GO:0006631|GO:0016491|GO:0055114 KEGG: 00062+4.2.1.17+1.1.1.35|KEGG: 00071+4.2.1.17+1.1.1.35|KEGG: 00120+1.1.1.35|KEGG: 00280+4.2.1.17+1.1.1.35|KEGG: 00281+4.2.1.17+1.1.1.35|KEGG: 00310+4.2.1.17+1.1.1.35|KEGG: 00360+4.2.1.17|KEGG: 00362+4.2.1.17+1.1.1.35|KEGG: 00380+4.2.1.17+1.1.1.35|KEGG: 00410+4.2.1.17|KEGG: 00592+4.2.1.17|KEGG: 00623+1.1.1.35|KEGG: 00627+4.2.1.17|KEGG: 00640+4.2.1.17|KEGG: 00650+4.2.1.17+1.1.1.35|KEGG: 00720+4.2.1.17+1.1.1.35|KEGG: 00903+4.2.1.17|KEGG: 00930+4.2.1.17+1.1.1.35|MetaCyc: PWY-1361|MetaCyc: PWY-5109|MetaCyc: PWY-5136|MetaCyc: PWY-5138|MetaCyc: PWY-5177|MetaCyc: PWY-5789|MetaCyc: PWY-6435|MetaCyc: PWY-6583|MetaCyc: PWY-6863|MetaCyc: PWY-6883|MetaCyc: PWY-6944|MetaCyc: PWY-6945|MetaCyc: PWY-6946|MetaCyc: PWY-7007|MetaCyc: PWY-7046|MetaCyc: PWY-7094|MetaCyc: PWY-7216|MetaCyc: PWY-735|MetaCyc: PWY-7401|MetaCyc: PWY-7606|MetaCyc: PWY-7654|MetaCyc: PWY-7656|MetaCyc: PWY-7726|MetaCyc: PWY-7778|MetaCyc: PWY-7779 CDA09_16965 5044bed79218b3b44523a165f56d48d4 283 PIRSF PIRSF000105 1 283 6.2E-86 T 01-11-2018 IPR022694 3-hydroxyacyl-CoA dehydrogenase GO:0003857|GO:0006631|GO:0055114|GO:0070403 CDA09_16965 5044bed79218b3b44523a165f56d48d4 283 SUPERFAMILY SSF48179 185 282 2.64E-32 T 01-11-2018 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily GO:0055114 CDA09_16965 5044bed79218b3b44523a165f56d48d4 283 Pfam PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain 186 282 9.6E-34 T 01-11-2018 IPR006108 3-hydroxyacyl-CoA dehydrogenase, C-terminal GO:0003857|GO:0006631|GO:0016491|GO:0055114 KEGG: 00062+4.2.1.17+1.1.1.35|KEGG: 00071+4.2.1.17+1.1.1.35|KEGG: 00120+1.1.1.35|KEGG: 00280+4.2.1.17+1.1.1.35|KEGG: 00281+4.2.1.17+1.1.1.35|KEGG: 00310+4.2.1.17+1.1.1.35|KEGG: 00360+4.2.1.17|KEGG: 00362+4.2.1.17+1.1.1.35|KEGG: 00380+4.2.1.17+1.1.1.35|KEGG: 00410+4.2.1.17|KEGG: 00592+4.2.1.17|KEGG: 00623+1.1.1.35|KEGG: 00627+4.2.1.17|KEGG: 00640+4.2.1.17|KEGG: 00650+4.2.1.17+1.1.1.35|KEGG: 00720+4.2.1.17+1.1.1.35|KEGG: 00903+4.2.1.17|KEGG: 00930+4.2.1.17+1.1.1.35|MetaCyc: PWY-1361|MetaCyc: PWY-5109|MetaCyc: PWY-5136|MetaCyc: PWY-5138|MetaCyc: PWY-5177|MetaCyc: PWY-5789|MetaCyc: PWY-6435|MetaCyc: PWY-6583|MetaCyc: PWY-6863|MetaCyc: PWY-6883|MetaCyc: PWY-6944|MetaCyc: PWY-6945|MetaCyc: PWY-6946|MetaCyc: PWY-7007|MetaCyc: PWY-7046|MetaCyc: PWY-7094|MetaCyc: PWY-7216|MetaCyc: PWY-735|MetaCyc: PWY-7401|MetaCyc: PWY-7606|MetaCyc: PWY-7654|MetaCyc: PWY-7656|MetaCyc: PWY-7726|MetaCyc: PWY-7778|MetaCyc: PWY-7779 CDA09_16965 5044bed79218b3b44523a165f56d48d4 283 SUPERFAMILY SSF51735 2 185 2.72E-59 T 01-11-2018 IPR036291 NAD(P)-binding domain superfamily CDA09_16965 5044bed79218b3b44523a165f56d48d4 283 Gene3D G3DSA:3.40.50.720 1 189 7.8E-71 T 01-11-2018 CDA09_06915 8f44991e8f3200f13100d697188dcd32 392 Gene3D G3DSA:3.40.50.2300 23 346 2.4E-78 T 01-11-2018 CDA09_06915 8f44991e8f3200f13100d697188dcd32 392 Pfam PF13458 Periplasmic binding protein 21 376 3.9E-65 T 01-11-2018 IPR028081 Leucine-binding protein domain CDA09_06915 8f44991e8f3200f13100d697188dcd32 392 PRINTS PR00337 Leu/Ile/Val-binding protein family signature 44 60 4.3E-5 T 01-11-2018 IPR000709 Leu/Ile/Val-binding protein GO:0006865 CDA09_06915 8f44991e8f3200f13100d697188dcd32 392 PRINTS PR00337 Leu/Ile/Val-binding protein family signature 257 275 4.3E-5 T 01-11-2018 IPR000709 Leu/Ile/Val-binding protein GO:0006865 CDA09_06915 8f44991e8f3200f13100d697188dcd32 392 PRINTS PR00337 Leu/Ile/Val-binding protein family signature 22 38 4.3E-5 T 01-11-2018 IPR000709 Leu/Ile/Val-binding protein GO:0006865 CDA09_06915 8f44991e8f3200f13100d697188dcd32 392 SUPERFAMILY SSF53822 21 385 1.88E-84 T 01-11-2018 IPR028082 Periplasmic binding protein-like I CDA09_06915 8f44991e8f3200f13100d697188dcd32 392 Gene3D G3DSA:3.40.50.2300 147 275 2.4E-78 T 01-11-2018 CDA09_05175 3770be07ca6452035510247aa285f0d9 269 Gene3D G3DSA:3.40.190.80 159 267 7.9E-23 T 01-11-2018 CDA09_05175 3770be07ca6452035510247aa285f0d9 269 ProSitePatterns PS00629 Inositol monophosphatase family signature 1. 89 102 - T 01-11-2018 IPR020583 Inositol monophosphatase, metal-binding site CDA09_05175 3770be07ca6452035510247aa285f0d9 269 Gene3D G3DSA:3.30.540.10 7 158 4.6E-39 T 01-11-2018 CDA09_05175 3770be07ca6452035510247aa285f0d9 269 Pfam PF00459 Inositol monophosphatase family 15 253 8.9E-49 T 01-11-2018 IPR000760 Inositol monophosphatase-like GO:0046854 CDA09_05175 3770be07ca6452035510247aa285f0d9 269 SUPERFAMILY SSF56655 18 265 1.02E-63 T 01-11-2018 CDA09_05175 3770be07ca6452035510247aa285f0d9 269 PRINTS PR00377 Inositol monophosphatase superfamily signature 138 161 2.2E-23 T 01-11-2018 IPR000760 Inositol monophosphatase-like GO:0046854 CDA09_05175 3770be07ca6452035510247aa285f0d9 269 PRINTS PR00377 Inositol monophosphatase superfamily signature 89 105 2.2E-23 T 01-11-2018 IPR000760 Inositol monophosphatase-like GO:0046854 CDA09_05175 3770be07ca6452035510247aa285f0d9 269 PRINTS PR00377 Inositol monophosphatase superfamily signature 181 202 2.2E-23 T 01-11-2018 IPR000760 Inositol monophosphatase-like GO:0046854 CDA09_05175 3770be07ca6452035510247aa285f0d9 269 PRINTS PR00377 Inositol monophosphatase superfamily signature 42 62 2.2E-23 T 01-11-2018 IPR000760 Inositol monophosphatase-like GO:0046854 CDA09_05175 3770be07ca6452035510247aa285f0d9 269 PRINTS PR00377 Inositol monophosphatase superfamily signature 212 236 2.2E-23 T 01-11-2018 IPR000760 Inositol monophosphatase-like GO:0046854 CDA09_05175 3770be07ca6452035510247aa285f0d9 269 ProSitePatterns PS00630 Inositol monophosphatase family signature 2. 215 229 - T 01-11-2018 IPR020550 Inositol monophosphatase, conserved site GO:0046854 CDA09_05080 686a85b2963b350bd3aec7963f20cf76 367 SUPERFAMILY SSF53448 2 296 9.62E-68 T 01-11-2018 IPR029044 Nucleotide-diphospho-sugar transferases CDA09_05080 686a85b2963b350bd3aec7963f20cf76 367 Gene3D G3DSA:3.90.550.10 1 252 4.6E-67 T 01-11-2018 IPR029044 Nucleotide-diphospho-sugar transferases CDA09_05080 686a85b2963b350bd3aec7963f20cf76 367 SUPERFAMILY SSF51161 257 335 3.09E-12 T 01-11-2018 IPR011004 Trimeric LpxA-like superfamily CDA09_05080 686a85b2963b350bd3aec7963f20cf76 367 Pfam PF00483 Nucleotidyl transferase 3 244 7.7E-51 T 01-11-2018 IPR005835 Nucleotidyl transferase domain GO:0009058|GO:0016779 CDA09_05080 686a85b2963b350bd3aec7963f20cf76 367 Gene3D G3DSA:2.160.10.10 254 344 6.5E-9 T 01-11-2018 CDA09_05080 686a85b2963b350bd3aec7963f20cf76 367 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 284 317 5.7E-6 T 01-11-2018 IPR001451 Hexapeptide repeat CDA09_12175 6589a3efb51436b5d7addebac40d1932 465 SUPERFAMILY SSF52374 5 303 5.36E-112 T 01-11-2018 CDA09_12175 6589a3efb51436b5d7addebac40d1932 465 Gene3D G3DSA:1.10.8.70 386 465 7.1E-10 T 01-11-2018 IPR020752 Aminoacyl-tRNA synthetase, class I, anticodon-binding domain, subdomain 1 GO:0000049 KEGG: 00860+6.1.1.17|KEGG: 00970+6.1.1.17|MetaCyc: PWY-5188 CDA09_12175 6589a3efb51436b5d7addebac40d1932 465 Gene3D G3DSA:1.10.8.70 321 385 2.2E-5 T 01-11-2018 IPR020752 Aminoacyl-tRNA synthetase, class I, anticodon-binding domain, subdomain 1 GO:0000049 KEGG: 00860+6.1.1.17|KEGG: 00970+6.1.1.17|MetaCyc: PWY-5188 CDA09_12175 6589a3efb51436b5d7addebac40d1932 465 TIGRFAM TIGR00464 gltX_bact: glutamate--tRNA ligase 5 462 3.8E-170 T 01-11-2018 IPR004527 Glutamate-tRNA ligase, bacterial/mitochondrial GO:0000166|GO:0004818|GO:0005524|GO:0005737|GO:0006424 KEGG: 00860+6.1.1.17|KEGG: 00970+6.1.1.17|MetaCyc: PWY-5188|Reactome: R-HSA-379726 CDA09_12175 6589a3efb51436b5d7addebac40d1932 465 ProSitePatterns PS00178 Aminoacyl-transfer RNA synthetases class-I signature. 11 22 - T 01-11-2018 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site GO:0000166|GO:0004812|GO:0005524|GO:0006418 CDA09_12175 6589a3efb51436b5d7addebac40d1932 465 Gene3D G3DSA:3.40.50.620 3 320 6.2E-139 T 01-11-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold CDA09_12175 6589a3efb51436b5d7addebac40d1932 465 Hamap MF_00022 Glutamate--tRNA ligase [gltX]. 4 465 31.689 T 01-11-2018 IPR004527 Glutamate-tRNA ligase, bacterial/mitochondrial GO:0000166|GO:0004818|GO:0005524|GO:0005737|GO:0006424 KEGG: 00860+6.1.1.17|KEGG: 00970+6.1.1.17|MetaCyc: PWY-5188|Reactome: R-HSA-379726 CDA09_12175 6589a3efb51436b5d7addebac40d1932 465 Pfam PF00749 tRNA synthetases class I (E and Q), catalytic domain 4 311 2.3E-108 T 01-11-2018 IPR020058 Glutamyl/glutaminyl-tRNA synthetase, class Ib, catalytic domain GO:0004812|GO:0005524|GO:0043039 CDA09_12175 6589a3efb51436b5d7addebac40d1932 465 PRINTS PR00987 Glutamyl-tRNA synthetase signature 37 50 2.8E-27 T 01-11-2018 IPR000924 Glutamyl/glutaminyl-tRNA synthetase GO:0000166|GO:0004812|GO:0005524|GO:0005737|GO:0043039 CDA09_12175 6589a3efb51436b5d7addebac40d1932 465 PRINTS PR00987 Glutamyl-tRNA synthetase signature 185 195 2.8E-27 T 01-11-2018 IPR000924 Glutamyl/glutaminyl-tRNA synthetase GO:0000166|GO:0004812|GO:0005524|GO:0005737|GO:0043039 CDA09_12175 6589a3efb51436b5d7addebac40d1932 465 PRINTS PR00987 Glutamyl-tRNA synthetase signature 201 209 2.8E-27 T 01-11-2018 IPR000924 Glutamyl/glutaminyl-tRNA synthetase GO:0000166|GO:0004812|GO:0005524|GO:0005737|GO:0043039 CDA09_12175 6589a3efb51436b5d7addebac40d1932 465 PRINTS PR00987 Glutamyl-tRNA synthetase signature 22 33 2.8E-27 T 01-11-2018 IPR000924 Glutamyl/glutaminyl-tRNA synthetase GO:0000166|GO:0004812|GO:0005524|GO:0005737|GO:0043039 CDA09_12175 6589a3efb51436b5d7addebac40d1932 465 PRINTS PR00987 Glutamyl-tRNA synthetase signature 8 20 2.8E-27 T 01-11-2018 IPR000924 Glutamyl/glutaminyl-tRNA synthetase GO:0000166|GO:0004812|GO:0005524|GO:0005737|GO:0043039 CDA09_12175 6589a3efb51436b5d7addebac40d1932 465 SUPERFAMILY SSF48163 305 463 1.83E-37 T 01-11-2018 IPR008925 Aminoacyl-tRNA synthetase, class I, anticodon-binding GO:0000049 KEGG: 00860+6.1.1.17|KEGG: 00970+6.1.1.17|MetaCyc: PWY-5188|Reactome: R-HSA-379726 CDA09_19600 3ebfc5a75dd4e139ac8dc78092f83572 396 Gene3D G3DSA:2.40.30.10 208 336 6.1E-54 T 01-11-2018 CDA09_19600 3ebfc5a75dd4e139ac8dc78092f83572 396 ProSitePatterns PS00301 Translational (tr)-type guanine nucleotide-binding (G) domain signature. 51 66 - T 01-11-2018 IPR031157 Tr-type G domain, conserved site CDA09_19600 3ebfc5a75dd4e139ac8dc78092f83572 396 Pfam PF03143 Elongation factor Tu C-terminal domain 300 394 1.3E-32 T 01-11-2018 IPR004160 Translation elongation factor EFTu/EF1A, C-terminal CDA09_19600 3ebfc5a75dd4e139ac8dc78092f83572 396 TIGRFAM TIGR00485 EF-Tu: translation elongation factor Tu 1 396 9.0E-232 T 01-11-2018 IPR004541 Translation elongation factor EFTu/EF1A, bacterial/organelle GO:0003746|GO:0005525|GO:0005622|GO:0006414 Reactome: R-HSA-5389840 CDA09_19600 3ebfc5a75dd4e139ac8dc78092f83572 396 Pfam PF03144 Elongation factor Tu domain 2 227 296 1.4E-16 T 01-11-2018 IPR004161 Translation elongation factor EFTu-like, domain 2 GO:0005525 CDA09_19600 3ebfc5a75dd4e139ac8dc78092f83572 396 SUPERFAMILY SSF50447 207 303 6.68E-31 T 01-11-2018 IPR009000 Translation protein, beta-barrel domain superfamily CDA09_19600 3ebfc5a75dd4e139ac8dc78092f83572 396 PRINTS PR00315 GTP-binding elongation factor signature 94 105 1.0E-24 T 01-11-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 CDA09_19600 3ebfc5a75dd4e139ac8dc78092f83572 396 PRINTS PR00315 GTP-binding elongation factor signature 58 66 1.0E-24 T 01-11-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 CDA09_19600 3ebfc5a75dd4e139ac8dc78092f83572 396 PRINTS PR00315 GTP-binding elongation factor signature 131 140 1.0E-24 T 01-11-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 CDA09_19600 3ebfc5a75dd4e139ac8dc78092f83572 396 PRINTS PR00315 GTP-binding elongation factor signature 78 88 1.0E-24 T 01-11-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 CDA09_19600 3ebfc5a75dd4e139ac8dc78092f83572 396 PRINTS PR00315 GTP-binding elongation factor signature 14 27 1.0E-24 T 01-11-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 CDA09_19600 3ebfc5a75dd4e139ac8dc78092f83572 396 SUPERFAMILY SSF52540 5 221 3.58E-61 T 01-11-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CDA09_19600 3ebfc5a75dd4e139ac8dc78092f83572 396 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 13 150 5.0E-16 T 01-11-2018 IPR005225 Small GTP-binding protein domain GO:0005525 CDA09_19600 3ebfc5a75dd4e139ac8dc78092f83572 396 Pfam PF00009 Elongation factor Tu GTP binding domain 10 203 2.6E-60 T 01-11-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 CDA09_19600 3ebfc5a75dd4e139ac8dc78092f83572 396 Gene3D G3DSA:2.40.30.10 340 395 1.1E-28 T 01-11-2018 CDA09_19600 3ebfc5a75dd4e139ac8dc78092f83572 396 Hamap MF_00118_B Elongation factor Tu [tuf]. 1 396 60.959 T 01-11-2018 IPR004541 Translation elongation factor EFTu/EF1A, bacterial/organelle GO:0003746|GO:0005525|GO:0005622|GO:0006414 Reactome: R-HSA-5389840 CDA09_19600 3ebfc5a75dd4e139ac8dc78092f83572 396 SUPERFAMILY SSF50465 304 396 3.45E-36 T 01-11-2018 IPR009001 Translation elongation factor EF1A/initiation factor IF2gamma, C-terminal CDA09_19600 3ebfc5a75dd4e139ac8dc78092f83572 396 Gene3D G3DSA:3.40.50.300 1 205 3.9E-71 T 01-11-2018 CDA09_19535 3ebfc5a75dd4e139ac8dc78092f83572 396 Gene3D G3DSA:2.40.30.10 208 336 6.1E-54 T 01-11-2018 CDA09_19535 3ebfc5a75dd4e139ac8dc78092f83572 396 ProSitePatterns PS00301 Translational (tr)-type guanine nucleotide-binding (G) domain signature. 51 66 - T 01-11-2018 IPR031157 Tr-type G domain, conserved site CDA09_19535 3ebfc5a75dd4e139ac8dc78092f83572 396 Pfam PF03143 Elongation factor Tu C-terminal domain 300 394 1.3E-32 T 01-11-2018 IPR004160 Translation elongation factor EFTu/EF1A, C-terminal CDA09_19535 3ebfc5a75dd4e139ac8dc78092f83572 396 TIGRFAM TIGR00485 EF-Tu: translation elongation factor Tu 1 396 9.0E-232 T 01-11-2018 IPR004541 Translation elongation factor EFTu/EF1A, bacterial/organelle GO:0003746|GO:0005525|GO:0005622|GO:0006414 Reactome: R-HSA-5389840 CDA09_19535 3ebfc5a75dd4e139ac8dc78092f83572 396 Pfam PF03144 Elongation factor Tu domain 2 227 296 1.4E-16 T 01-11-2018 IPR004161 Translation elongation factor EFTu-like, domain 2 GO:0005525 CDA09_19535 3ebfc5a75dd4e139ac8dc78092f83572 396 SUPERFAMILY SSF50447 207 303 6.68E-31 T 01-11-2018 IPR009000 Translation protein, beta-barrel domain superfamily CDA09_19535 3ebfc5a75dd4e139ac8dc78092f83572 396 PRINTS PR00315 GTP-binding elongation factor signature 94 105 1.0E-24 T 01-11-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 CDA09_19535 3ebfc5a75dd4e139ac8dc78092f83572 396 PRINTS PR00315 GTP-binding elongation factor signature 58 66 1.0E-24 T 01-11-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 CDA09_19535 3ebfc5a75dd4e139ac8dc78092f83572 396 PRINTS PR00315 GTP-binding elongation factor signature 131 140 1.0E-24 T 01-11-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 CDA09_19535 3ebfc5a75dd4e139ac8dc78092f83572 396 PRINTS PR00315 GTP-binding elongation factor signature 78 88 1.0E-24 T 01-11-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 CDA09_19535 3ebfc5a75dd4e139ac8dc78092f83572 396 PRINTS PR00315 GTP-binding elongation factor signature 14 27 1.0E-24 T 01-11-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 CDA09_19535 3ebfc5a75dd4e139ac8dc78092f83572 396 SUPERFAMILY SSF52540 5 221 3.58E-61 T 01-11-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CDA09_19535 3ebfc5a75dd4e139ac8dc78092f83572 396 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 13 150 5.0E-16 T 01-11-2018 IPR005225 Small GTP-binding protein domain GO:0005525 CDA09_19535 3ebfc5a75dd4e139ac8dc78092f83572 396 Pfam PF00009 Elongation factor Tu GTP binding domain 10 203 2.6E-60 T 01-11-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 CDA09_19535 3ebfc5a75dd4e139ac8dc78092f83572 396 Gene3D G3DSA:2.40.30.10 340 395 1.1E-28 T 01-11-2018 CDA09_19535 3ebfc5a75dd4e139ac8dc78092f83572 396 Hamap MF_00118_B Elongation factor Tu [tuf]. 1 396 60.959 T 01-11-2018 IPR004541 Translation elongation factor EFTu/EF1A, bacterial/organelle GO:0003746|GO:0005525|GO:0005622|GO:0006414 Reactome: R-HSA-5389840 CDA09_19535 3ebfc5a75dd4e139ac8dc78092f83572 396 SUPERFAMILY SSF50465 304 396 3.45E-36 T 01-11-2018 IPR009001 Translation elongation factor EF1A/initiation factor IF2gamma, C-terminal CDA09_19535 3ebfc5a75dd4e139ac8dc78092f83572 396 Gene3D G3DSA:3.40.50.300 1 205 3.9E-71 T 01-11-2018 CDA09_13570 f6a5555c6113ae5c24ec7b385869283c 321 SUPERFAMILY SSF54593 11 289 3.88E-10 T 01-11-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase CDA09_13570 f6a5555c6113ae5c24ec7b385869283c 321 Gene3D G3DSA:3.10.180.10 187 320 3.7E-11 T 01-11-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase CDA09_19980 ae4456408e6834b23423ead5f72793de 435 Gene3D G3DSA:3.40.50.300 151 363 4.2E-8 T 01-11-2018 CDA09_19980 ae4456408e6834b23423ead5f72793de 435 SUPERFAMILY SSF46785 43 107 4.43E-6 T 01-11-2018 IPR036390 Winged helix DNA-binding domain superfamily CDA09_19980 ae4456408e6834b23423ead5f72793de 435 SMART SM00382 164 355 2.5E-5 T 01-11-2018 IPR003593 AAA+ ATPase domain CDA09_19980 ae4456408e6834b23423ead5f72793de 435 SUPERFAMILY SSF52540 145 429 2.24E-21 T 01-11-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CDA09_00645 00cd655613950f1e439016b5ab2f81a4 246 Pfam PF13247 4Fe-4S dicluster domain 94 187 5.4E-30 T 01-11-2018 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain CDA09_00645 00cd655613950f1e439016b5ab2f81a4 246 SUPERFAMILY SSF54862 40 222 2.72E-68 T 01-11-2018 CDA09_00645 00cd655613950f1e439016b5ab2f81a4 246 Gene3D G3DSA:3.30.70.20 32 81 2.3E-8 T 01-11-2018 CDA09_00645 00cd655613950f1e439016b5ab2f81a4 246 Gene3D G3DSA:3.30.70.20 82 241 4.3E-60 T 01-11-2018 CDA09_00645 00cd655613950f1e439016b5ab2f81a4 246 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 132 143 - T 01-11-2018 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site CDA09_14960 4dc8e2b7fe236b4f43b6e6cd1bf11acf 127 SUPERFAMILY SSF82649 1 125 4.45E-49 T 01-11-2018 CDA09_14960 4dc8e2b7fe236b4f43b6e6cd1bf11acf 127 Pfam PF01592 NifU-like N terminal domain 2 125 7.5E-56 T 01-11-2018 IPR002871 NIF system FeS cluster assembly, NifU, N-terminal GO:0005506|GO:0016226|GO:0051536 Reactome: R-HSA-1362409 CDA09_14960 4dc8e2b7fe236b4f43b6e6cd1bf11acf 127 TIGRFAM TIGR01999 iscU: FeS cluster assembly scaffold IscU 3 125 1.4E-69 T 01-11-2018 IPR011339 ISC system FeS cluster assembly, IscU scaffold GO:0005506|GO:0016226|GO:0051536 Reactome: R-HSA-1362409 CDA09_14960 4dc8e2b7fe236b4f43b6e6cd1bf11acf 127 Gene3D G3DSA:3.90.1010.10 1 127 7.0E-58 T 01-11-2018 CDA09_14940 6016d2411682a5b13b3e07aadcf3cbce 113 PRINTS PR00355 Adrenodoxin signature 42 52 5.1E-10 T 01-11-2018 IPR001055 Adrenodoxin GO:0009055|GO:0051537 Reactome: R-HSA-1362409|Reactome: R-HSA-196108|Reactome: R-HSA-211976|Reactome: R-HSA-2395516|Reactome: R-HSA-5579026 CDA09_14940 6016d2411682a5b13b3e07aadcf3cbce 113 PRINTS PR00355 Adrenodoxin signature 60 74 5.1E-10 T 01-11-2018 IPR001055 Adrenodoxin GO:0009055|GO:0051537 Reactome: R-HSA-1362409|Reactome: R-HSA-196108|Reactome: R-HSA-211976|Reactome: R-HSA-2395516|Reactome: R-HSA-5579026 CDA09_14940 6016d2411682a5b13b3e07aadcf3cbce 113 PRINTS PR00355 Adrenodoxin signature 83 91 5.1E-10 T 01-11-2018 IPR001055 Adrenodoxin GO:0009055|GO:0051537 Reactome: R-HSA-1362409|Reactome: R-HSA-196108|Reactome: R-HSA-211976|Reactome: R-HSA-2395516|Reactome: R-HSA-5579026 CDA09_14940 6016d2411682a5b13b3e07aadcf3cbce 113 Pfam PF00111 2Fe-2S iron-sulfur cluster binding domain 13 91 7.6E-13 T 01-11-2018 IPR001041 2Fe-2S ferredoxin-type iron-sulfur binding domain GO:0009055|GO:0051536 CDA09_14940 6016d2411682a5b13b3e07aadcf3cbce 113 SUPERFAMILY SSF54292 4 108 4.99E-32 T 01-11-2018 IPR036010 2Fe-2S ferredoxin-like superfamily GO:0009055|GO:0051536 CDA09_14940 6016d2411682a5b13b3e07aadcf3cbce 113 TIGRFAM TIGR02007 fdx_isc: ferredoxin, 2Fe-2S type, ISC system 3 110 2.7E-56 T 01-11-2018 IPR011536 Ferredoxin 2Fe-2S type, proteobacteria GO:0009055|GO:0051537 CDA09_14940 6016d2411682a5b13b3e07aadcf3cbce 113 ProSitePatterns PS00814 Adrenodoxin family, iron-sulfur binding region signature. 42 52 - T 01-11-2018 IPR018298 Adrenodoxin, iron-sulphur binding site GO:0009055|GO:0051537 Reactome: R-HSA-1362409|Reactome: R-HSA-196108|Reactome: R-HSA-211976|Reactome: R-HSA-2395516|Reactome: R-HSA-5579026 CDA09_14940 6016d2411682a5b13b3e07aadcf3cbce 113 Gene3D G3DSA:3.10.20.30 1 113 3.2E-35 T 01-11-2018 IPR012675 Beta-grasp domain superfamily CDA09_14375 91d84da3909028f68e641f6e746ddce3 258 Gene3D G3DSA:3.40.50.80 100 254 6.6E-43 T 01-11-2018 IPR039261 Ferredoxin-NADP reductase (FNR), nucleotide-binding domain CDA09_14375 91d84da3909028f68e641f6e746ddce3 258 Pfam PF00175 Oxidoreductase NAD-binding domain 112 229 6.5E-8 T 01-11-2018 IPR001433 Oxidoreductase FAD/NAD(P)-binding GO:0016491|GO:0055114 CDA09_14375 91d84da3909028f68e641f6e746ddce3 258 SUPERFAMILY SSF63380 5 99 4.94E-27 T 01-11-2018 IPR017938 Riboflavin synthase-like beta-barrel CDA09_14375 91d84da3909028f68e641f6e746ddce3 258 Gene3D G3DSA:2.40.30.10 1 97 2.8E-30 T 01-11-2018 CDA09_14375 91d84da3909028f68e641f6e746ddce3 258 SUPERFAMILY SSF52343 103 256 1.13E-41 T 01-11-2018 IPR039261 Ferredoxin-NADP reductase (FNR), nucleotide-binding domain CDA09_14375 91d84da3909028f68e641f6e746ddce3 258 Pfam PF00970 Oxidoreductase FAD-binding domain 16 98 1.9E-9 T 01-11-2018 IPR008333 Flavoprotein pyridine nucleotide cytochrome reductase-like, FAD-binding domain Reactome: R-HSA-1237044 CDA09_14375 91d84da3909028f68e641f6e746ddce3 258 PRINTS PR00371 Flavoprotein pyridine nucleotide cytochrome reductase signature 215 223 9.9E-7 T 01-11-2018 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase GO:0016491|GO:0055114 CDA09_14375 91d84da3909028f68e641f6e746ddce3 258 PRINTS PR00371 Flavoprotein pyridine nucleotide cytochrome reductase signature 136 145 9.9E-7 T 01-11-2018 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase GO:0016491|GO:0055114 CDA09_14375 91d84da3909028f68e641f6e746ddce3 258 PRINTS PR00371 Flavoprotein pyridine nucleotide cytochrome reductase signature 51 58 9.9E-7 T 01-11-2018 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase GO:0016491|GO:0055114 CDA09_14375 91d84da3909028f68e641f6e746ddce3 258 PRINTS PR00371 Flavoprotein pyridine nucleotide cytochrome reductase signature 111 130 9.9E-7 T 01-11-2018 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase GO:0016491|GO:0055114 CDA09_04270 a54c0cb7b4b40f818e7edea86e1a3742 85 SUPERFAMILY SSF82657 2 81 1.44E-24 T 01-11-2018 IPR036065 BolA-like superfamily CDA09_04270 a54c0cb7b4b40f818e7edea86e1a3742 85 PIRSF PIRSF003113 1 83 3.6E-22 T 01-11-2018 IPR002634 BolA protein CDA09_04270 a54c0cb7b4b40f818e7edea86e1a3742 85 Gene3D G3DSA:3.30.300.90 2 75 2.0E-26 T 01-11-2018 CDA09_04270 a54c0cb7b4b40f818e7edea86e1a3742 85 Pfam PF01722 BolA-like protein 25 74 9.7E-15 T 01-11-2018 IPR002634 BolA protein CDA09_03715 2bc41da0d17ca6e86d85437ccfc34799 304 SUPERFAMILY SSF56349 113 302 8.54E-57 T 01-11-2018 IPR011010 DNA breaking-rejoining enzyme, catalytic core GO:0003677 CDA09_03715 2bc41da0d17ca6e86d85437ccfc34799 304 Hamap MF_01807 Tyrosine recombinase XerD [xerD]. 11 304 57.142 T 01-11-2018 IPR011932 Tyrosine recombinase XerD GO:0006310|GO:0009009 CDA09_03715 2bc41da0d17ca6e86d85437ccfc34799 304 Pfam PF00589 Phage integrase family 118 289 6.3E-49 T 01-11-2018 IPR002104 Integrase, catalytic domain GO:0003677|GO:0006310|GO:0015074 CDA09_03715 2bc41da0d17ca6e86d85437ccfc34799 304 Gene3D G3DSA:1.10.443.10 116 298 2.6E-69 T 01-11-2018 IPR013762 Integrase-like, catalytic domain superfamily GO:0003677|GO:0006310|GO:0015074 CDA09_03715 2bc41da0d17ca6e86d85437ccfc34799 304 TIGRFAM TIGR02225 recomb_XerD: tyrosine recombinase XerD 17 303 1.2E-110 T 01-11-2018 IPR011932 Tyrosine recombinase XerD GO:0006310|GO:0009009 CDA09_03715 2bc41da0d17ca6e86d85437ccfc34799 304 SUPERFAMILY SSF47823 15 106 6.67E-26 T 01-11-2018 CDA09_03715 2bc41da0d17ca6e86d85437ccfc34799 304 Hamap MF_01808 Tyrosine recombinase XerC [xerC]. 13 304 53.568 T 01-11-2018 IPR023009 Tyrosine recombinase XerC/XerD CDA09_03715 2bc41da0d17ca6e86d85437ccfc34799 304 Pfam PF02899 Phage integrase, N-terminal SAM-like domain 15 96 1.4E-13 T 01-11-2018 IPR004107 Integrase, SAM-like, N-terminal GO:0003677|GO:0015074 CDA09_03715 2bc41da0d17ca6e86d85437ccfc34799 304 Gene3D G3DSA:1.10.150.130 11 104 4.9E-16 T 01-11-2018 IPR010998 Integrase/recombinase, N-terminal CDA09_02415 24cdc6866f95fb4ccd3df025bba83bd7 293 Pfam PF03279 Bacterial lipid A biosynthesis acyltransferase 5 284 3.0E-62 T 01-11-2018 IPR004960 Bacterial lipid A biosynthesis acyltransferase GO:0016021|GO:0016740 CDA09_02415 24cdc6866f95fb4ccd3df025bba83bd7 293 PIRSF PIRSF026649 2 293 8.9E-91 T 01-11-2018 IPR004960 Bacterial lipid A biosynthesis acyltransferase GO:0016021|GO:0016740 CDA09_14900 3e523be55a1113402966cd4dad18f2d8 368 ProDom PD035754 CELL DIVISION MEMBRANE ZIPA SEPTATION TRANSMEMBRANE HOMOLOG INNER CYCLE ZIPA 222 351 2.0E-45 T 01-11-2018 IPR007449 ZipA, C-terminal FtsZ-binding domain GO:0090529 CDA09_14900 3e523be55a1113402966cd4dad18f2d8 368 SUPERFAMILY SSF64383 218 350 2.75E-34 T 01-11-2018 IPR036765 ZipA, C-terminal FtsZ-binding domain superfamily GO:0090529 CDA09_14900 3e523be55a1113402966cd4dad18f2d8 368 SMART SM00771 218 343 4.6E-41 T 01-11-2018 IPR007449 ZipA, C-terminal FtsZ-binding domain GO:0090529 CDA09_14900 3e523be55a1113402966cd4dad18f2d8 368 Gene3D G3DSA:3.30.1400.10 219 351 2.5E-25 T 01-11-2018 IPR036765 ZipA, C-terminal FtsZ-binding domain superfamily GO:0090529 CDA09_14900 3e523be55a1113402966cd4dad18f2d8 368 Pfam PF04354 ZipA, C-terminal FtsZ-binding domain 222 341 2.1E-32 T 01-11-2018 IPR007449 ZipA, C-terminal FtsZ-binding domain GO:0090529 CDA09_04475 ddb3e18b77c9d899b3b38d8fe0006128 436 Gene3D G3DSA:3.40.440.10 6 256 6.2E-93 T 01-11-2018 CDA09_04475 ddb3e18b77c9d899b3b38d8fe0006128 436 SUPERFAMILY SSF52540 3 434 3.29E-169 T 01-11-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CDA09_04475 ddb3e18b77c9d899b3b38d8fe0006128 436 Gene3D G3DSA:1.10.300.10 103 202 6.2E-93 T 01-11-2018 CDA09_04475 ddb3e18b77c9d899b3b38d8fe0006128 436 ProSitePatterns PS00513 Adenylosuccinate synthetase active site. 134 145 - T 01-11-2018 IPR033128 Adenylosuccinate synthase, active site KEGG: 00230+6.3.4.4|KEGG: 00250+6.3.4.4|MetaCyc: PWY-7219|Reactome: R-HSA-73817 CDA09_04475 ddb3e18b77c9d899b3b38d8fe0006128 436 SMART SM00788 4 429 4.4E-281 T 01-11-2018 IPR001114 Adenylosuccinate synthetase GO:0004019|GO:0005525|GO:0006164 KEGG: 00230+6.3.4.4|KEGG: 00250+6.3.4.4|MetaCyc: PWY-7219|Reactome: R-HSA-73817 CDA09_04475 ddb3e18b77c9d899b3b38d8fe0006128 436 Hamap MF_00011 Adenylosuccinate synthetase [purA]. 1 436 202.762 T 01-11-2018 IPR001114 Adenylosuccinate synthetase GO:0004019|GO:0005525|GO:0006164 KEGG: 00230+6.3.4.4|KEGG: 00250+6.3.4.4|MetaCyc: PWY-7219|Reactome: R-HSA-73817 CDA09_04475 ddb3e18b77c9d899b3b38d8fe0006128 436 ProSitePatterns PS01266 Adenylosuccinate synthetase GTP-binding site. 11 18 - T 01-11-2018 IPR018220 Adenylosuccinate synthase, GTP-binding site GO:0005525 KEGG: 00230+6.3.4.4|KEGG: 00250+6.3.4.4|MetaCyc: PWY-7219|Reactome: R-HSA-73817 CDA09_04475 ddb3e18b77c9d899b3b38d8fe0006128 436 Pfam PF00709 Adenylosuccinate synthetase 5 428 7.4E-171 T 01-11-2018 IPR001114 Adenylosuccinate synthetase GO:0004019|GO:0005525|GO:0006164 KEGG: 00230+6.3.4.4|KEGG: 00250+6.3.4.4|MetaCyc: PWY-7219|Reactome: R-HSA-73817 CDA09_04475 ddb3e18b77c9d899b3b38d8fe0006128 436 TIGRFAM TIGR00184 purA: adenylosuccinate synthase 6 432 1.6E-165 T 01-11-2018 IPR001114 Adenylosuccinate synthetase GO:0004019|GO:0005525|GO:0006164 KEGG: 00230+6.3.4.4|KEGG: 00250+6.3.4.4|MetaCyc: PWY-7219|Reactome: R-HSA-73817 CDA09_04475 ddb3e18b77c9d899b3b38d8fe0006128 436 Gene3D G3DSA:3.90.170.10 268 436 6.3E-67 T 01-11-2018 CDA09_18300 438103010ed0721fa08ccea44d9835af 302 Gene3D G3DSA:3.40.50.150 106 298 3.2E-60 T 01-11-2018 CDA09_18300 438103010ed0721fa08ccea44d9835af 302 PIRSF PIRSF000401 1 296 2.3E-88 T 01-11-2018 IPR004498 Ribosomal protein L11 methyltransferase GO:0006479|GO:0008276 CDA09_18300 438103010ed0721fa08ccea44d9835af 302 TIGRFAM TIGR00406 prmA: ribosomal protein L11 methyltransferase 2 287 4.3E-70 T 01-11-2018 IPR004498 Ribosomal protein L11 methyltransferase GO:0006479|GO:0008276 CDA09_18300 438103010ed0721fa08ccea44d9835af 302 SUPERFAMILY SSF53335 74 273 3.58E-41 T 01-11-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase CDA09_18300 438103010ed0721fa08ccea44d9835af 302 Hamap MF_00735 Ribosomal protein L11 methyltransferase [prmA]. 2 294 30.559 T 01-11-2018 IPR004498 Ribosomal protein L11 methyltransferase GO:0006479|GO:0008276 CDA09_18300 438103010ed0721fa08ccea44d9835af 302 Pfam PF06325 Ribosomal protein L11 methyltransferase (PrmA) 2 293 6.4E-89 T 01-11-2018 CDA09_14920 a673843dcc2de9f3ba08d76cdd172284 395 ProSitePatterns PS00662 Bacterial type II secretion system protein E signature. 193 207 - T 01-11-2018 IPR001482 Type II/IV secretion system protein CDA09_14920 a673843dcc2de9f3ba08d76cdd172284 395 SUPERFAMILY SSF52540 3 335 2.19E-62 T 01-11-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CDA09_14920 a673843dcc2de9f3ba08d76cdd172284 395 TIGRFAM TIGR01420 pilT_fam: twitching motility protein 4 342 1.1E-127 T 01-11-2018 IPR006321 Pilus retraction protein PilT GO:0005524 CDA09_14920 a673843dcc2de9f3ba08d76cdd172284 395 Gene3D G3DSA:3.30.450.90 2 100 1.9E-26 T 01-11-2018 CDA09_14920 a673843dcc2de9f3ba08d76cdd172284 395 Pfam PF00437 Type II/IV secretion system protein 9 271 1.1E-40 T 01-11-2018 IPR001482 Type II/IV secretion system protein CDA09_14920 a673843dcc2de9f3ba08d76cdd172284 395 Gene3D G3DSA:3.40.50.300 102 355 9.6E-90 T 01-11-2018 CDA09_01870 46965c9ed8341f1186395229662f4c00 218 Pfam PF00072 Response regulator receiver domain 73 180 1.1E-20 T 01-11-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 CDA09_01870 46965c9ed8341f1186395229662f4c00 218 SMART SM00448 71 185 2.2E-25 T 01-11-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 CDA09_01870 46965c9ed8341f1186395229662f4c00 218 Gene3D G3DSA:3.40.50.12740 71 195 2.5E-26 T 01-11-2018 CDA09_01870 46965c9ed8341f1186395229662f4c00 218 SUPERFAMILY SSF52172 72 189 5.69E-29 T 01-11-2018 IPR011006 CheY-like superfamily CDA09_05170 c3a0a025e91f9633088d420a721210fd 291 Gene3D G3DSA:3.40.50.300 1 290 1.5E-115 T 01-11-2018 CDA09_05170 c3a0a025e91f9633088d420a721210fd 291 PRINTS PR00478 Phosphoribulokinase family signature 12 29 3.5E-31 T 01-11-2018 IPR006082 Phosphoribulokinase GO:0005524|GO:0005975|GO:0008974 KEGG: 00710+2.7.1.19|MetaCyc: PWY-5723 CDA09_05170 c3a0a025e91f9633088d420a721210fd 291 PRINTS PR00478 Phosphoribulokinase family signature 165 182 3.5E-31 T 01-11-2018 IPR006082 Phosphoribulokinase GO:0005524|GO:0005975|GO:0008974 KEGG: 00710+2.7.1.19|MetaCyc: PWY-5723 CDA09_05170 c3a0a025e91f9633088d420a721210fd 291 PRINTS PR00478 Phosphoribulokinase family signature 127 145 3.5E-31 T 01-11-2018 IPR006082 Phosphoribulokinase GO:0005524|GO:0005975|GO:0008974 KEGG: 00710+2.7.1.19|MetaCyc: PWY-5723 CDA09_05170 c3a0a025e91f9633088d420a721210fd 291 PRINTS PR00478 Phosphoribulokinase family signature 183 206 3.5E-31 T 01-11-2018 IPR006082 Phosphoribulokinase GO:0005524|GO:0005975|GO:0008974 KEGG: 00710+2.7.1.19|MetaCyc: PWY-5723 CDA09_05170 c3a0a025e91f9633088d420a721210fd 291 ProSitePatterns PS00567 Phosphoribulokinase signature. 165 178 - T 01-11-2018 IPR006082 Phosphoribulokinase GO:0005524|GO:0005975|GO:0008974 KEGG: 00710+2.7.1.19|MetaCyc: PWY-5723 CDA09_05170 c3a0a025e91f9633088d420a721210fd 291 SUPERFAMILY SSF52540 4 286 2.47E-47 T 01-11-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CDA09_05170 c3a0a025e91f9633088d420a721210fd 291 Pfam PF00485 Phosphoribulokinase / Uridine kinase family 7 215 7.3E-70 T 01-11-2018 IPR006083 Phosphoribulokinase/uridine kinase GO:0005524|GO:0016301 Reactome: R-HSA-73614 CDA09_02395 6a131f71580d68a0c394f80e8a9b0547 86 Gene3D G3DSA:2.40.50.140 1 71 5.5E-30 T 01-11-2018 CDA09_02395 6a131f71580d68a0c394f80e8a9b0547 86 Pfam PF01176 Translation initiation factor 1A / IF-1 7 70 6.3E-22 T 01-11-2018 IPR006196 RNA-binding domain, S1, IF1 type GO:0003723|GO:0003743|GO:0006413 CDA09_02395 6a131f71580d68a0c394f80e8a9b0547 86 SUPERFAMILY SSF50249 2 71 4.0E-24 T 01-11-2018 IPR012340 Nucleic acid-binding, OB-fold CDA09_02395 6a131f71580d68a0c394f80e8a9b0547 86 Hamap MF_00075 Translation initiation factor IF-1 [infA]. 1 75 25.487 T 01-11-2018 IPR004368 Translation initiation factor IF-1 GO:0003743|GO:0006413 CDA09_02395 6a131f71580d68a0c394f80e8a9b0547 86 TIGRFAM TIGR00008 infA: translation initiation factor IF-1 3 71 8.1E-31 T 01-11-2018 IPR004368 Translation initiation factor IF-1 GO:0003743|GO:0006413 CDA09_03505 f8783cc1b49e36447b84f75bf6f27423 540 SUPERFAMILY SSF103473 267 528 4.97E-5 T 01-11-2018 IPR036259 MFS transporter superfamily CDA09_03505 f8783cc1b49e36447b84f75bf6f27423 540 Pfam PF03092 BT1 family 351 529 3.9E-9 T 01-11-2018 IPR039309 Biopterin transporter family CDA09_17885 830869ee75e1e1ea5f6a5736b03c885b 423 Gene3D G3DSA:3.30.420.40 9 174 1.8E-37 T 01-11-2018 CDA09_17885 830869ee75e1e1ea5f6a5736b03c885b 423 SUPERFAMILY SSF53067 8 173 5.5E-30 T 01-11-2018 CDA09_17885 830869ee75e1e1ea5f6a5736b03c885b 423 ProSitePatterns PS01036 Heat shock hsp70 proteins family signature 3. 376 390 - T 01-11-2018 IPR018181 Heat shock protein 70, conserved site Reactome: R-HSA-3371453 CDA09_17885 830869ee75e1e1ea5f6a5736b03c885b 423 Gene3D G3DSA:3.30.420.40 176 223 1.8E-37 T 01-11-2018 CDA09_17885 830869ee75e1e1ea5f6a5736b03c885b 423 Gene3D G3DSA:3.30.420.40 355 402 2.6E-15 T 01-11-2018 CDA09_17885 830869ee75e1e1ea5f6a5736b03c885b 423 Pfam PF00012 Hsp70 protein 8 232 2.0E-12 T 01-11-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 CDA09_17885 830869ee75e1e1ea5f6a5736b03c885b 423 Pfam PF00012 Hsp70 protein 307 394 5.3E-7 T 01-11-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 CDA09_17885 830869ee75e1e1ea5f6a5736b03c885b 423 Gene3D G3DSA:3.90.640.10 224 233 1.8E-37 T 01-11-2018 CDA09_17885 830869ee75e1e1ea5f6a5736b03c885b 423 Gene3D G3DSA:3.90.640.10 301 354 2.6E-15 T 01-11-2018 CDA09_17885 830869ee75e1e1ea5f6a5736b03c885b 423 PRINTS PR00301 70kDa heat shock protein signature 188 198 1.1E-5 T 01-11-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 CDA09_17885 830869ee75e1e1ea5f6a5736b03c885b 423 PRINTS PR00301 70kDa heat shock protein signature 6 19 1.1E-5 T 01-11-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 CDA09_17885 830869ee75e1e1ea5f6a5736b03c885b 423 PRINTS PR00301 70kDa heat shock protein signature 122 142 1.1E-5 T 01-11-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 CDA09_17885 830869ee75e1e1ea5f6a5736b03c885b 423 PRINTS PR00301 70kDa heat shock protein signature 34 46 1.1E-5 T 01-11-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 CDA09_17885 830869ee75e1e1ea5f6a5736b03c885b 423 SUPERFAMILY SSF53067 177 420 2.36E-31 T 01-11-2018 CDA09_19910 ab37d023cd20387833e96c80fc621ccb 510 SUPERFAMILY SSF52096 3 249 8.58E-80 T 01-11-2018 IPR029045 ClpP/crotonase-like domain superfamily CDA09_19910 ab37d023cd20387833e96c80fc621ccb 510 Gene3D G3DSA:3.90.226.10 1 256 5.8E-97 T 01-11-2018 CDA09_19910 ab37d023cd20387833e96c80fc621ccb 510 Pfam PF01039 Carboxyl transferase domain 27 508 7.8E-201 T 01-11-2018 IPR034733 Acetyl-CoA carboxylase MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6722|Reactome: R-HSA-196780 CDA09_19910 ab37d023cd20387833e96c80fc621ccb 510 SUPERFAMILY SSF52096 252 510 2.39E-90 T 01-11-2018 IPR029045 ClpP/crotonase-like domain superfamily CDA09_19910 ab37d023cd20387833e96c80fc621ccb 510 Gene3D G3DSA:3.90.226.10 258 510 4.3E-95 T 01-11-2018 CDA09_09880 bb281b9f3539e5eb1d6896e1dea80a9f 467 Pfam PF02515 CoA-transferase family III 219 390 4.5E-35 T 01-11-2018 IPR003673 CoA-transferase family III GO:0003824 CDA09_09880 bb281b9f3539e5eb1d6896e1dea80a9f 467 SUPERFAMILY SSF89796 218 436 3.53E-41 T 01-11-2018 IPR023606 CoA-transferase family III domain superfamily CDA09_09880 bb281b9f3539e5eb1d6896e1dea80a9f 467 Gene3D G3DSA:3.40.50.10540 217 463 1.3E-42 T 01-11-2018 IPR023606 CoA-transferase family III domain superfamily CDA09_09880 bb281b9f3539e5eb1d6896e1dea80a9f 467 SUPERFAMILY SSF89796 5 194 1.03E-8 T 01-11-2018 IPR023606 CoA-transferase family III domain superfamily CDA09_19260 e66cf9f9a089a26b2f694cd7aa45b4fc 199 SUPERFAMILY SSF52218 1 198 2.02E-58 T 01-11-2018 IPR029039 Flavoprotein-like superfamily CDA09_19260 e66cf9f9a089a26b2f694cd7aa45b4fc 199 Gene3D G3DSA:3.40.50.360 1 198 1.6E-63 T 01-11-2018 IPR029039 Flavoprotein-like superfamily CDA09_19260 e66cf9f9a089a26b2f694cd7aa45b4fc 199 Hamap MF_01216 FMN-dependent NADH-azoreductase [azoR]. 1 198 32.573 T 01-11-2018 IPR023048 NADH-azoreductase, FMN-dependent GO:0016661|GO:0055114 CDA09_19260 e66cf9f9a089a26b2f694cd7aa45b4fc 199 Pfam PF02525 Flavodoxin-like fold 1 196 6.3E-50 T 01-11-2018 IPR003680 Flavodoxin-like fold CDA09_22885 b92633a747804288cf817ee0b8eb0210 383 PIRSF PIRSF005622 1 375 5.7E-152 T 01-11-2018 IPR002780 Hydrogenase formation HypD protein GO:0046872 CDA09_22885 b92633a747804288cf817ee0b8eb0210 383 TIGRFAM TIGR00075 hypD: hydrogenase expression/formation protein HypD 2 372 3.6E-140 T 01-11-2018 IPR002780 Hydrogenase formation HypD protein GO:0046872 CDA09_22885 b92633a747804288cf817ee0b8eb0210 383 Gene3D G3DSA:3.40.50.11740 61 307 1.4E-102 T 01-11-2018 CDA09_22885 b92633a747804288cf817ee0b8eb0210 383 Pfam PF01924 Hydrogenase formation hypA family 12 370 1.5E-150 T 01-11-2018 IPR002780 Hydrogenase formation HypD protein GO:0046872 CDA09_22885 b92633a747804288cf817ee0b8eb0210 383 Gene3D G3DSA:1.10.10.2140 321 372 2.3E-25 T 01-11-2018 CDA09_22885 b92633a747804288cf817ee0b8eb0210 383 Gene3D G3DSA:3.40.50.11750 20 266 1.4E-102 T 01-11-2018 CDA09_01265 82262529d8dd5a053a4503c6fe37ca39 850 Pfam PF00384 Molybdopterin oxidoreductase 100 583 1.7E-88 T 01-11-2018 IPR006656 Molybdopterin oxidoreductase GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 CDA09_01265 82262529d8dd5a053a4503c6fe37ca39 850 ProSitePatterns PS00551 Prokaryotic molybdopterin oxidoreductases signature 1. 48 65 - T 01-11-2018 IPR027467 Molybdopterin oxidoreductase, molybdopterin cofactor binding site GO:0051539 CDA09_01265 82262529d8dd5a053a4503c6fe37ca39 850 Pfam PF04879 Molybdopterin oxidoreductase Fe4S4 domain 44 96 3.9E-18 T 01-11-2018 IPR006963 Molybdopterin oxidoreductase, 4Fe-4S domain GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 CDA09_01265 82262529d8dd5a053a4503c6fe37ca39 850 Gene3D G3DSA:3.40.50.740 100 645 0.0 T 01-11-2018 CDA09_01265 82262529d8dd5a053a4503c6fe37ca39 850 Pfam PF01568 Molydopterin dinucleotide binding domain 736 844 3.7E-24 T 01-11-2018 IPR006657 Molybdopterin dinucleotide-binding domain GO:0016491|GO:0043546|GO:0055114 CDA09_01265 82262529d8dd5a053a4503c6fe37ca39 850 Gene3D G3DSA:3.30.200.210 43 688 0.0 T 01-11-2018 CDA09_01265 82262529d8dd5a053a4503c6fe37ca39 850 SUPERFAMILY SSF53706 41 727 2.09E-201 T 01-11-2018 CDA09_01265 82262529d8dd5a053a4503c6fe37ca39 850 SUPERFAMILY SSF50692 709 850 2.71E-41 T 01-11-2018 IPR009010 Aspartate decarboxylase-like domain superfamily CDA09_01265 82262529d8dd5a053a4503c6fe37ca39 850 SMART SM00926 43 97 2.7E-16 T 01-11-2018 IPR006963 Molybdopterin oxidoreductase, 4Fe-4S domain GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 CDA09_01265 82262529d8dd5a053a4503c6fe37ca39 850 Gene3D G3DSA:3.40.228.10 179 724 0.0 T 01-11-2018 CDA09_01265 82262529d8dd5a053a4503c6fe37ca39 850 TIGRFAM TIGR01706 NAPA: periplasmic nitrate reductase, large subunit 3 850 0.0 T 01-11-2018 IPR010051 Periplasmic nitrate reductase, large subunit GO:0008940|GO:0030151|GO:0042597|GO:0055114 KEGG: 00910+1.9.6.1|MetaCyc: PWY-5674 CDA09_01265 82262529d8dd5a053a4503c6fe37ca39 850 Hamap MF_01630 Periplasmic nitrate reductase [napA]. 1 850 32.446 T 01-11-2018 IPR010051 Periplasmic nitrate reductase, large subunit GO:0008940|GO:0030151|GO:0042597|GO:0055114 KEGG: 00910+1.9.6.1|MetaCyc: PWY-5674 CDA09_01265 82262529d8dd5a053a4503c6fe37ca39 850 Gene3D G3DSA:2.40.40.20 727 850 2.4E-47 T 01-11-2018 CDA09_05290 b6e81d0d2c1d45d58d07d6ea75c7b0f4 249 Hamap MF_01039 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase [gpmA]. 1 228 45.398 T 01-11-2018 IPR005952 Phosphoglycerate mutase 1 GO:0004619|GO:0006096|GO:0016868 KEGG: 00010+5.4.2.11|KEGG: 00260+5.4.2.11|KEGG: 00680+5.4.2.11|MetaCyc: PWY-1622|MetaCyc: PWY-5484 CDA09_05290 b6e81d0d2c1d45d58d07d6ea75c7b0f4 249 Pfam PF00300 Histidine phosphatase superfamily (branch 1) 142 216 4.6E-6 T 01-11-2018 IPR013078 Histidine phosphatase superfamily, clade-1 CDA09_05290 b6e81d0d2c1d45d58d07d6ea75c7b0f4 249 Pfam PF00300 Histidine phosphatase superfamily (branch 1) 4 125 1.1E-29 T 01-11-2018 IPR013078 Histidine phosphatase superfamily, clade-1 CDA09_05290 b6e81d0d2c1d45d58d07d6ea75c7b0f4 249 PIRSF PIRSF000709 2 113 5.2E-8 T 01-11-2018 CDA09_05290 b6e81d0d2c1d45d58d07d6ea75c7b0f4 249 PIRSF PIRSF000709 143 242 0.0057 T 01-11-2018 CDA09_05290 b6e81d0d2c1d45d58d07d6ea75c7b0f4 249 SMART SM00855 3 189 6.6E-28 T 01-11-2018 IPR013078 Histidine phosphatase superfamily, clade-1 CDA09_05290 b6e81d0d2c1d45d58d07d6ea75c7b0f4 249 Gene3D G3DSA:3.40.50.1240 1 248 1.2E-87 T 01-11-2018 IPR029033 Histidine phosphatase superfamily CDA09_05290 b6e81d0d2c1d45d58d07d6ea75c7b0f4 249 ProSitePatterns PS00175 Phosphoglycerate mutase family phosphohistidine signature. 6 15 - T 01-11-2018 IPR001345 Phosphoglycerate/bisphosphoglycerate mutase, active site GO:0003824 CDA09_05290 b6e81d0d2c1d45d58d07d6ea75c7b0f4 249 SUPERFAMILY SSF53254 1 232 4.44E-74 T 01-11-2018 IPR029033 Histidine phosphatase superfamily CDA09_05290 b6e81d0d2c1d45d58d07d6ea75c7b0f4 249 TIGRFAM TIGR01258 pgm_1: phosphoglycerate mutase 1 family 3 246 3.6E-112 T 01-11-2018 IPR005952 Phosphoglycerate mutase 1 GO:0004619|GO:0006096|GO:0016868 KEGG: 00010+5.4.2.11|KEGG: 00260+5.4.2.11|KEGG: 00680+5.4.2.11|MetaCyc: PWY-1622|MetaCyc: PWY-5484 CDA09_01085 46bbd8569b7bd6a1680f534421d5a6bd 128 SUPERFAMILY SSF54523 11 108 1.99E-21 T 01-11-2018 CDA09_01085 46bbd8569b7bd6a1680f534421d5a6bd 128 Gene3D G3DSA:3.30.700.10 11 126 1.4E-16 T 01-11-2018 CDA09_01085 46bbd8569b7bd6a1680f534421d5a6bd 128 Pfam PF07963 Prokaryotic N-terminal methylation motif 5 30 3.3E-9 T 01-11-2018 IPR012902 Prokaryotic N-terminal methylation site CDA09_01085 46bbd8569b7bd6a1680f534421d5a6bd 128 PRINTS PR00813 Bacterial general secretion pathway protein G signature 10 35 3.7E-8 T 01-11-2018 IPR000983 Bacterial general secretion pathway protein G-type pilin GO:0008565|GO:0015627|GO:0015628 CDA09_01085 46bbd8569b7bd6a1680f534421d5a6bd 128 PRINTS PR00813 Bacterial general secretion pathway protein G signature 46 64 3.7E-8 T 01-11-2018 IPR000983 Bacterial general secretion pathway protein G-type pilin GO:0008565|GO:0015627|GO:0015628 CDA09_01085 46bbd8569b7bd6a1680f534421d5a6bd 128 TIGRFAM TIGR02532 IV_pilin_GFxxxE: prepilin-type N-terminal cleavage/methylation domain 8 31 1.7E-8 T 01-11-2018 IPR012902 Prokaryotic N-terminal methylation site CDA09_01085 46bbd8569b7bd6a1680f534421d5a6bd 128 ProSitePatterns PS00409 Prokaryotic N-terminal methylation site. 9 29 - T 01-11-2018 IPR012902 Prokaryotic N-terminal methylation site CDA09_07745 79a3a583991cda5a04306ff0c44aefdb 205 Gene3D G3DSA:1.10.10.10 133 198 8.1E-20 T 01-11-2018 IPR036388 Winged helix-like DNA-binding domain superfamily CDA09_07745 79a3a583991cda5a04306ff0c44aefdb 205 Pfam PF00196 Bacterial regulatory proteins, luxR family 142 196 3.3E-16 T 01-11-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 CDA09_07745 79a3a583991cda5a04306ff0c44aefdb 205 SUPERFAMILY SSF52172 6 137 3.56E-30 T 01-11-2018 IPR011006 CheY-like superfamily CDA09_07745 79a3a583991cda5a04306ff0c44aefdb 205 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 157 173 9.0E-12 T 01-11-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 CDA09_07745 79a3a583991cda5a04306ff0c44aefdb 205 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 173 185 9.0E-12 T 01-11-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 CDA09_07745 79a3a583991cda5a04306ff0c44aefdb 205 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 143 157 9.0E-12 T 01-11-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 CDA09_07745 79a3a583991cda5a04306ff0c44aefdb 205 SMART SM00421 140 197 5.2E-19 T 01-11-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 CDA09_07745 79a3a583991cda5a04306ff0c44aefdb 205 Gene3D G3DSA:3.40.50.2300 1 132 1.6E-40 T 01-11-2018 CDA09_07745 79a3a583991cda5a04306ff0c44aefdb 205 SMART SM00448 5 116 8.5E-23 T 01-11-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 CDA09_07745 79a3a583991cda5a04306ff0c44aefdb 205 SUPERFAMILY SSF46894 133 198 1.02E-17 T 01-11-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 CDA09_07745 79a3a583991cda5a04306ff0c44aefdb 205 Pfam PF00072 Response regulator receiver domain 7 116 3.0E-24 T 01-11-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 CDA09_09820 ba225189602885b4cbe29d828833e2fd 644 Pfam PF00005 ABC transporter 340 476 8.3E-23 T 01-11-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 CDA09_09820 ba225189602885b4cbe29d828833e2fd 644 SUPERFAMILY SSF52540 2 256 7.53E-45 T 01-11-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CDA09_09820 ba225189602885b4cbe29d828833e2fd 644 Pfam PF12848 ABC transporter 217 292 1.4E-29 T 01-11-2018 IPR032781 ABC-transporter extension domain CDA09_09820 ba225189602885b4cbe29d828833e2fd 644 SUPERFAMILY SSF52540 292 512 2.78E-42 T 01-11-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CDA09_09820 ba225189602885b4cbe29d828833e2fd 644 ProSitePatterns PS00211 ABC transporters family signature. 448 462 - T 01-11-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 CDA09_09820 ba225189602885b4cbe29d828833e2fd 644 Pfam PF00005 ABC transporter 17 178 1.9E-21 T 01-11-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 CDA09_09820 ba225189602885b4cbe29d828833e2fd 644 ProSitePatterns PS00211 ABC transporters family signature. 150 164 - T 01-11-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 CDA09_09820 ba225189602885b4cbe29d828833e2fd 644 SMART SM00382 26 225 1.9E-8 T 01-11-2018 IPR003593 AAA+ ATPase domain CDA09_09820 ba225189602885b4cbe29d828833e2fd 644 SMART SM00382 347 520 5.5E-11 T 01-11-2018 IPR003593 AAA+ ATPase domain CDA09_09820 ba225189602885b4cbe29d828833e2fd 644 Gene3D G3DSA:3.40.50.300 276 556 4.1E-55 T 01-11-2018 CDA09_09820 ba225189602885b4cbe29d828833e2fd 644 Gene3D G3DSA:3.40.50.300 1 259 2.7E-55 T 01-11-2018 CDA09_05755 355353c2ddbf300f2b8e8475ca451b19 266 Gene3D G3DSA:3.30.2350.10 17 245 3.2E-59 T 01-11-2018 CDA09_05755 355353c2ddbf300f2b8e8475ca451b19 266 ProSitePatterns PS01129 Rlu family of pseudouridine synthase signature. 71 85 - T 01-11-2018 IPR006224 Pseudouridine synthase, RluC/RluD, conserved site GO:0001522|GO:0003723|GO:0009451|GO:0009982 CDA09_05755 355353c2ddbf300f2b8e8475ca451b19 266 Pfam PF00849 RNA pseudouridylate synthase 32 192 2.4E-37 T 01-11-2018 IPR006145 Pseudouridine synthase, RsuA/RluB/C/D/E/F GO:0001522|GO:0003723|GO:0009451|GO:0009982 CDA09_05755 355353c2ddbf300f2b8e8475ca451b19 266 SUPERFAMILY SSF55120 20 259 3.2E-60 T 01-11-2018 IPR020103 Pseudouridine synthase, catalytic domain superfamily GO:0001522|GO:0003723|GO:0009451|GO:0009982 CDA09_05765 323cfedbdda443fb8fd0287e3d6b8440 314 SUPERFAMILY SSF46785 1 88 8.49E-14 T 01-11-2018 IPR036390 Winged helix DNA-binding domain superfamily CDA09_05765 323cfedbdda443fb8fd0287e3d6b8440 314 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 19 30 6.6E-7 T 01-11-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 CDA09_05765 323cfedbdda443fb8fd0287e3d6b8440 314 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 40 51 6.6E-7 T 01-11-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 CDA09_05765 323cfedbdda443fb8fd0287e3d6b8440 314 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 30 40 6.6E-7 T 01-11-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 CDA09_05765 323cfedbdda443fb8fd0287e3d6b8440 314 Gene3D G3DSA:3.40.190.10 167 267 5.1E-93 T 01-11-2018 CDA09_05765 323cfedbdda443fb8fd0287e3d6b8440 314 SUPERFAMILY SSF53850 92 298 2.04E-44 T 01-11-2018 CDA09_05765 323cfedbdda443fb8fd0287e3d6b8440 314 Gene3D G3DSA:1.10.10.10 1 86 1.5E-17 T 01-11-2018 IPR036388 Winged helix-like DNA-binding domain superfamily CDA09_05765 323cfedbdda443fb8fd0287e3d6b8440 314 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 3 64 9.8E-15 T 01-11-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 CDA09_05765 323cfedbdda443fb8fd0287e3d6b8440 314 Gene3D G3DSA:3.40.190.10 92 301 5.1E-93 T 01-11-2018 CDA09_05765 323cfedbdda443fb8fd0287e3d6b8440 314 Pfam PF03466 LysR substrate binding domain 89 291 1.8E-44 T 01-11-2018 IPR005119 LysR, substrate-binding CDA09_08475 6be53c1b5996bdc14a9264337474cbe6 236 Pfam PF01557 Fumarylacetoacetate (FAA) hydrolase family 29 232 2.6E-48 T 01-11-2018 IPR011234 Fumarylacetoacetase-like, C-terminal GO:0003824 CDA09_08475 6be53c1b5996bdc14a9264337474cbe6 236 SUPERFAMILY SSF56529 24 234 4.32E-63 T 01-11-2018 IPR036663 Fumarylacetoacetase-like, C-terminal domain superfamily GO:0003824 CDA09_08475 6be53c1b5996bdc14a9264337474cbe6 236 Gene3D G3DSA:3.90.850.10 2 236 1.3E-76 T 01-11-2018 IPR036663 Fumarylacetoacetase-like, C-terminal domain superfamily GO:0003824 CDA09_03945 8b3d7d041dc2970450e3f912fea46db0 393 Gene3D G3DSA:3.30.70.1350 221 302 8.2E-20 T 01-11-2018 IPR036837 Cation efflux protein, cytoplasmic domain superfamily Reactome: R-HSA-435368 CDA09_03945 8b3d7d041dc2970450e3f912fea46db0 393 SUPERFAMILY SSF160240 224 303 3.66E-20 T 01-11-2018 IPR036837 Cation efflux protein, cytoplasmic domain superfamily Reactome: R-HSA-435368 CDA09_03945 8b3d7d041dc2970450e3f912fea46db0 393 SUPERFAMILY SSF161111 20 221 1.02E-44 T 01-11-2018 IPR027469 Cation efflux transmembrane domain superfamily CDA09_03945 8b3d7d041dc2970450e3f912fea46db0 393 Pfam PF16916 Dimerisation domain of Zinc Transporter 225 300 3.5E-23 T 01-11-2018 IPR027470 Cation efflux protein, cytoplasmic domain CDA09_03945 8b3d7d041dc2970450e3f912fea46db0 393 TIGRFAM TIGR01297 CDF: cation diffusion facilitator family transporter 23 303 3.6E-62 T 01-11-2018 IPR002524 Cation efflux protein GO:0006812|GO:0008324|GO:0016021|GO:0055085 CDA09_03945 8b3d7d041dc2970450e3f912fea46db0 393 Pfam PF01545 Cation efflux family 28 220 4.2E-38 T 01-11-2018 IPR002524 Cation efflux protein GO:0006812|GO:0008324|GO:0016021|GO:0055085 CDA09_03945 8b3d7d041dc2970450e3f912fea46db0 393 Gene3D G3DSA:1.20.1510.10 21 220 2.9E-53 T 01-11-2018 IPR027469 Cation efflux transmembrane domain superfamily CDA09_05445 20f87d437423fbd333b640d11da104eb 1287 Pfam PF13116 Protein of unknown function 522 797 2.6E-61 T 01-11-2018 IPR025263 Domain of unknown function DUF3971 CDA09_05445 20f87d437423fbd333b640d11da104eb 1287 Pfam PF13502 AsmA-like C-terminal region 1027 1269 7.7E-67 T 01-11-2018 IPR032712 AsmA-like, C-terminal CDA09_05445 20f87d437423fbd333b640d11da104eb 1287 TIGRFAM TIGR02099 TIGR02099: TIGR02099 family protein 12 1274 3.6E-236 T 01-11-2018 IPR011836 Conserved hypothetical protein CHP02099 CDA09_18605 f13aa8814e02fe83a06ae4d455ed532e 155 Gene3D G3DSA:3.10.580.10 2 135 6.0E-39 T 01-11-2018 CDA09_18605 f13aa8814e02fe83a06ae4d455ed532e 155 SMART SM00116 18 65 1.1E-6 T 01-11-2018 IPR000644 CBS domain CDA09_18605 f13aa8814e02fe83a06ae4d455ed532e 155 SMART SM00116 83 130 2.1E-7 T 01-11-2018 IPR000644 CBS domain CDA09_18605 f13aa8814e02fe83a06ae4d455ed532e 155 Pfam PF00571 CBS domain 17 60 1.8E-9 T 01-11-2018 IPR000644 CBS domain CDA09_18605 f13aa8814e02fe83a06ae4d455ed532e 155 Pfam PF00571 CBS domain 77 129 6.0E-12 T 01-11-2018 IPR000644 CBS domain CDA09_18605 f13aa8814e02fe83a06ae4d455ed532e 155 SUPERFAMILY SSF54631 14 137 3.16E-29 T 01-11-2018 CDA09_03545 036d5456b6cf69f1b3f667536aea55ad 234 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 33 46 1.1E-34 T 01-11-2018 IPR006439 HAD hydrolase, subfamily IA GO:0016787 CDA09_03545 036d5456b6cf69f1b3f667536aea55ad 234 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 186 199 1.1E-34 T 01-11-2018 IPR006439 HAD hydrolase, subfamily IA GO:0016787 CDA09_03545 036d5456b6cf69f1b3f667536aea55ad 234 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 110 123 1.1E-34 T 01-11-2018 IPR006439 HAD hydrolase, subfamily IA GO:0016787 CDA09_03545 036d5456b6cf69f1b3f667536aea55ad 234 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 141 157 1.1E-34 T 01-11-2018 IPR006439 HAD hydrolase, subfamily IA GO:0016787 CDA09_03545 036d5456b6cf69f1b3f667536aea55ad 234 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 159 179 1.1E-34 T 01-11-2018 IPR006439 HAD hydrolase, subfamily IA GO:0016787 CDA09_03545 036d5456b6cf69f1b3f667536aea55ad 234 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 7 18 1.1E-34 T 01-11-2018 IPR006439 HAD hydrolase, subfamily IA GO:0016787 CDA09_03545 036d5456b6cf69f1b3f667536aea55ad 234 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 47 60 1.1E-34 T 01-11-2018 IPR006439 HAD hydrolase, subfamily IA GO:0016787 CDA09_03545 036d5456b6cf69f1b3f667536aea55ad 234 TIGRFAM TIGR01493 HAD-SF-IA-v2: HAD hydrolase, family IA, variant 2 9 188 2.8E-25 T 01-11-2018 IPR006439 HAD hydrolase, subfamily IA GO:0016787 CDA09_03545 036d5456b6cf69f1b3f667536aea55ad 234 Gene3D G3DSA:3.40.50.1000 9 212 5.0E-70 T 01-11-2018 IPR023214 HAD superfamily CDA09_03545 036d5456b6cf69f1b3f667536aea55ad 234 Gene3D G3DSA:1.10.150.240 21 95 5.0E-70 T 01-11-2018 IPR023198 Phosphoglycolate phosphatase-like, domain 2 CDA09_03545 036d5456b6cf69f1b3f667536aea55ad 234 Pfam PF13419 Haloacid dehalogenase-like hydrolase 93 197 8.0E-9 T 01-11-2018 CDA09_03545 036d5456b6cf69f1b3f667536aea55ad 234 TIGRFAM TIGR01428 HAD_type_II: haloacid dehalogenase, type II 7 202 1.8E-65 T 01-11-2018 IPR006328 L-2-Haloacid dehalogenase GO:0019120 KEGG: 00361+3.8.1.2|KEGG: 00625+3.8.1.2|MetaCyc: PWY-7425 CDA09_03545 036d5456b6cf69f1b3f667536aea55ad 234 SUPERFAMILY SSF56784 7 226 5.85E-45 T 01-11-2018 IPR036412 HAD-like superfamily CDA09_13610 66d11e705a58e76c5cac96fa5014e4ff 290 Pfam PF10370 Domain of unknown function (DUF2437) 1 71 4.3E-5 T 01-11-2018 IPR018833 Domain of unknown function DUF2437 CDA09_13610 66d11e705a58e76c5cac96fa5014e4ff 290 SUPERFAMILY SSF56529 64 286 7.33E-65 T 01-11-2018 IPR036663 Fumarylacetoacetase-like, C-terminal domain superfamily GO:0003824 CDA09_13610 66d11e705a58e76c5cac96fa5014e4ff 290 Pfam PF01557 Fumarylacetoacetate (FAA) hydrolase family 78 284 5.7E-55 T 01-11-2018 IPR011234 Fumarylacetoacetase-like, C-terminal GO:0003824 CDA09_13610 66d11e705a58e76c5cac96fa5014e4ff 290 Gene3D G3DSA:3.90.850.10 72 288 8.0E-64 T 01-11-2018 IPR036663 Fumarylacetoacetase-like, C-terminal domain superfamily GO:0003824 CDA09_17705 ef96d70b719b969163499d45185dfe8b 540 Pfam PF00072 Response regulator receiver domain 10 122 2.5E-14 T 01-11-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 CDA09_17705 ef96d70b719b969163499d45185dfe8b 540 Gene3D G3DSA:3.40.50.2300 8 135 6.4E-19 T 01-11-2018 CDA09_17705 ef96d70b719b969163499d45185dfe8b 540 SUPERFAMILY SSF48452 165 291 9.79E-16 T 01-11-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 CDA09_17705 ef96d70b719b969163499d45185dfe8b 540 Gene3D G3DSA:1.25.40.10 136 370 2.6E-20 T 01-11-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 CDA09_17705 ef96d70b719b969163499d45185dfe8b 540 Pfam PF13432 Tetratricopeptide repeat 202 262 6.5E-7 T 01-11-2018 CDA09_17705 ef96d70b719b969163499d45185dfe8b 540 SUPERFAMILY SSF48452 257 485 7.21E-6 T 01-11-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 CDA09_17705 ef96d70b719b969163499d45185dfe8b 540 SUPERFAMILY SSF52172 6 142 1.42E-22 T 01-11-2018 IPR011006 CheY-like superfamily CDA09_17705 ef96d70b719b969163499d45185dfe8b 540 SMART SM00448 7 123 2.5E-13 T 01-11-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 CDA09_17705 ef96d70b719b969163499d45185dfe8b 540 Pfam PF07721 Tetratricopeptide repeat 167 189 0.51 T 01-11-2018 IPR011717 Tetratricopeptide TPR-4 GO:0042802 CDA09_17705 ef96d70b719b969163499d45185dfe8b 540 Pfam PF07721 Tetratricopeptide repeat 270 290 0.23 T 01-11-2018 IPR011717 Tetratricopeptide TPR-4 GO:0042802 CDA09_17705 ef96d70b719b969163499d45185dfe8b 540 Pfam PF07721 Tetratricopeptide repeat 306 327 0.28 T 01-11-2018 IPR011717 Tetratricopeptide TPR-4 GO:0042802 CDA09_19930 df4968cdf48a329048c566c9291efabb 466 PRINTS PR00149 Fumarate lyase superfamily signature 273 300 1.2E-34 T 01-11-2018 IPR000362 Fumarate lyase family CDA09_19930 df4968cdf48a329048c566c9291efabb 466 PRINTS PR00149 Fumarate lyase superfamily signature 319 335 1.2E-34 T 01-11-2018 IPR000362 Fumarate lyase family CDA09_19930 df4968cdf48a329048c566c9291efabb 466 PRINTS PR00149 Fumarate lyase superfamily signature 182 200 1.2E-34 T 01-11-2018 IPR000362 Fumarate lyase family CDA09_19930 df4968cdf48a329048c566c9291efabb 466 PRINTS PR00149 Fumarate lyase superfamily signature 136 154 1.2E-34 T 01-11-2018 IPR000362 Fumarate lyase family CDA09_19930 df4968cdf48a329048c566c9291efabb 466 Pfam PF10415 Fumarase C C-terminus 410 463 1.2E-23 T 01-11-2018 IPR018951 Fumarase C, C-terminal GO:0006099|GO:0016829 KEGG: 00020+4.2.1.2|KEGG: 00620+4.2.1.2|KEGG: 00720+4.2.1.2|MetaCyc: PWY-5392|MetaCyc: PWY-561|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7254|MetaCyc: PWY-7384|Reactome: R-HSA-71403 CDA09_19930 df4968cdf48a329048c566c9291efabb 466 Gene3D G3DSA:1.10.275.10 2 140 1.1E-54 T 01-11-2018 IPR024083 Fumarase/histidase, N-terminal CDA09_19930 df4968cdf48a329048c566c9291efabb 466 Hamap MF_00743 Fumarate hydratase class II [fumC]. 4 464 90.138 T 01-11-2018 IPR005677 Fumarate hydratase, class II GO:0004333|GO:0006106|GO:0045239 KEGG: 00020+4.2.1.2|KEGG: 00620+4.2.1.2|KEGG: 00720+4.2.1.2|MetaCyc: PWY-5392|MetaCyc: PWY-561|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7254|MetaCyc: PWY-7384|Reactome: R-HSA-71403 CDA09_19930 df4968cdf48a329048c566c9291efabb 466 SUPERFAMILY SSF48557 4 462 6.04E-156 T 01-11-2018 IPR008948 L-Aspartase-like GO:0003824 CDA09_19930 df4968cdf48a329048c566c9291efabb 466 ProSitePatterns PS00163 Fumarate lyases signature. 319 328 - T 01-11-2018 IPR020557 Fumarate lyase, conserved site GO:0003824 CDA09_19930 df4968cdf48a329048c566c9291efabb 466 Gene3D G3DSA:1.20.200.10 141 408 1.1E-111 T 01-11-2018 CDA09_19930 df4968cdf48a329048c566c9291efabb 466 TIGRFAM TIGR00979 fumC_II: fumarate hydratase, class II 5 461 1.3E-217 T 01-11-2018 IPR005677 Fumarate hydratase, class II GO:0004333|GO:0006106|GO:0045239 KEGG: 00020+4.2.1.2|KEGG: 00620+4.2.1.2|KEGG: 00720+4.2.1.2|MetaCyc: PWY-5392|MetaCyc: PWY-561|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7254|MetaCyc: PWY-7384|Reactome: R-HSA-71403 CDA09_19930 df4968cdf48a329048c566c9291efabb 466 PRINTS PR00145 Argininosuccinate lyase family signature 135 157 1.4E-7 T 01-11-2018 CDA09_19930 df4968cdf48a329048c566c9291efabb 466 PRINTS PR00145 Argininosuccinate lyase family signature 319 335 1.4E-7 T 01-11-2018 CDA09_19930 df4968cdf48a329048c566c9291efabb 466 PRINTS PR00145 Argininosuccinate lyase family signature 177 197 1.4E-7 T 01-11-2018 CDA09_19930 df4968cdf48a329048c566c9291efabb 466 Pfam PF00206 Lyase 12 344 5.9E-109 T 01-11-2018 IPR022761 Fumarate lyase, N-terminal CDA09_19930 df4968cdf48a329048c566c9291efabb 466 Gene3D G3DSA:1.10.40.30 410 465 2.3E-26 T 01-11-2018 CDA09_04815 317959f7a9499be6205d396b6a2f8bbc 493 Gene3D G3DSA:1.10.287.130 209 323 1.6E-22 T 01-11-2018 CDA09_04815 317959f7a9499be6205d396b6a2f8bbc 493 SUPERFAMILY SSF47384 241 322 4.12E-18 T 01-11-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 CDA09_04815 317959f7a9499be6205d396b6a2f8bbc 493 Gene3D G3DSA:3.30.565.10 328 480 2.1E-34 T 01-11-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily CDA09_04815 317959f7a9499be6205d396b6a2f8bbc 493 SMART SM00304 205 257 3.5E-4 T 01-11-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 CDA09_04815 317959f7a9499be6205d396b6a2f8bbc 493 Pfam PF08521 Two-component sensor kinase N-terminal 36 180 7.6E-40 T 01-11-2018 IPR013727 Two-component sensor kinase, N-terminal CDA09_04815 317959f7a9499be6205d396b6a2f8bbc 493 Pfam PF00512 His Kinase A (phospho-acceptor) domain 259 322 4.2E-14 T 01-11-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 CDA09_04815 317959f7a9499be6205d396b6a2f8bbc 493 SMART SM00388 258 323 6.9E-17 T 01-11-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 CDA09_04815 317959f7a9499be6205d396b6a2f8bbc 493 PRINTS PR00344 Bacterial sensor protein C-terminal signature 406 420 6.3E-11 T 01-11-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 CDA09_04815 317959f7a9499be6205d396b6a2f8bbc 493 PRINTS PR00344 Bacterial sensor protein C-terminal signature 463 476 6.3E-11 T 01-11-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 CDA09_04815 317959f7a9499be6205d396b6a2f8bbc 493 PRINTS PR00344 Bacterial sensor protein C-terminal signature 424 434 6.3E-11 T 01-11-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 CDA09_04815 317959f7a9499be6205d396b6a2f8bbc 493 PRINTS PR00344 Bacterial sensor protein C-terminal signature 438 456 6.3E-11 T 01-11-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 CDA09_04815 317959f7a9499be6205d396b6a2f8bbc 493 SUPERFAMILY SSF55874 312 477 2.1E-36 T 01-11-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily CDA09_04815 317959f7a9499be6205d396b6a2f8bbc 493 SMART SM00387 370 479 1.3E-34 T 01-11-2018 IPR003594 Histidine kinase/HSP90-like ATPase CDA09_04815 317959f7a9499be6205d396b6a2f8bbc 493 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 372 477 2.2E-20 T 01-11-2018 IPR003594 Histidine kinase/HSP90-like ATPase CDA09_06505 03a53ad0b8fa7989b92132e2ee34babf 565 Gene3D G3DSA:3.20.20.70 10 374 4.9E-155 T 01-11-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 CDA09_06505 03a53ad0b8fa7989b92132e2ee34babf 565 SUPERFAMILY SSF51569 20 328 2.75E-99 T 01-11-2018 CDA09_06505 03a53ad0b8fa7989b92132e2ee34babf 565 SUPERFAMILY SSF89000 386 435 4.71E-15 T 01-11-2018 CDA09_06505 03a53ad0b8fa7989b92132e2ee34babf 565 ProSitePatterns PS00815 Alpha-isopropylmalate and homocitrate synthases signature 1. 38 54 - T 01-11-2018 IPR002034 Alpha-isopropylmalate/homocitrate synthase, conserved site GO:0019752|GO:0046912 KEGG: 00290+2.3.3.13|KEGG: 00620+2.3.3.13|MetaCyc: PWY-6871 CDA09_06505 03a53ad0b8fa7989b92132e2ee34babf 565 SMART SM00917 420 553 2.6E-27 T 01-11-2018 IPR013709 2-isopropylmalate synthase LeuA, allosteric (dimerisation) domain GO:0003852|GO:0009098 KEGG: 00290+2.3.3.13|KEGG: 00620+2.3.3.13|MetaCyc: PWY-6871 CDA09_06505 03a53ad0b8fa7989b92132e2ee34babf 565 SUPERFAMILY SSF110921 442 551 3.01E-27 T 01-11-2018 IPR036230 2-isopropylmalate synthase LeuA, allosteric (dimerisation) domain superfamily KEGG: 00290+2.3.3.13|KEGG: 00620+2.3.3.13|MetaCyc: PWY-6871 CDA09_06505 03a53ad0b8fa7989b92132e2ee34babf 565 Pfam PF08502 LeuA allosteric (dimerisation) domain 420 552 2.8E-22 T 01-11-2018 IPR013709 2-isopropylmalate synthase LeuA, allosteric (dimerisation) domain GO:0003852|GO:0009098 KEGG: 00290+2.3.3.13|KEGG: 00620+2.3.3.13|MetaCyc: PWY-6871 CDA09_06505 03a53ad0b8fa7989b92132e2ee34babf 565 Pfam PF00682 HMGL-like 31 311 1.8E-77 T 01-11-2018 IPR000891 Pyruvate carboxyltransferase GO:0003824 CDA09_06505 03a53ad0b8fa7989b92132e2ee34babf 565 Hamap MF_00572 2-isopropylmalate synthase [leuA]. 6 554 52.712 T 01-11-2018 IPR005668 2-isopropylmalate synthase GO:0003852|GO:0009098 KEGG: 00290+2.3.3.13|KEGG: 00620+2.3.3.13|MetaCyc: PWY-6871 CDA09_06505 03a53ad0b8fa7989b92132e2ee34babf 565 TIGRFAM TIGR00970 leuA_yeast: 2-isopropylmalate synthase 5 552 9.1E-232 T 01-11-2018 IPR005668 2-isopropylmalate synthase GO:0003852|GO:0009098 KEGG: 00290+2.3.3.13|KEGG: 00620+2.3.3.13|MetaCyc: PWY-6871 CDA09_06505 03a53ad0b8fa7989b92132e2ee34babf 565 ProSitePatterns PS00816 Alpha-isopropylmalate and homocitrate synthases signature 2. 241 254 - T 01-11-2018 IPR002034 Alpha-isopropylmalate/homocitrate synthase, conserved site GO:0019752|GO:0046912 KEGG: 00290+2.3.3.13|KEGG: 00620+2.3.3.13|MetaCyc: PWY-6871 CDA09_06505 03a53ad0b8fa7989b92132e2ee34babf 565 Gene3D G3DSA:3.30.160.270 375 552 8.2E-53 T 01-11-2018 CDA09_15790 729902a331b88184893ff88c8d85d660 298 SUPERFAMILY SSF103481 186 280 5.89E-15 T 01-11-2018 CDA09_15790 729902a331b88184893ff88c8d85d660 298 Pfam PF00892 EamA-like transporter family 149 280 3.3E-18 T 01-11-2018 IPR000620 EamA domain GO:0016020|GO:0016021 CDA09_15790 729902a331b88184893ff88c8d85d660 298 Pfam PF00892 EamA-like transporter family 10 136 1.9E-18 T 01-11-2018 IPR000620 EamA domain GO:0016020|GO:0016021 CDA09_15790 729902a331b88184893ff88c8d85d660 298 SUPERFAMILY SSF103481 38 139 6.93E-16 T 01-11-2018 CDA09_03700 72959428b10828f8168a88caa4100262 125 SMART SM00905 4 113 4.1E-36 T 01-11-2018 IPR006157 Dihydroneopterin aldolase/epimerase domain GO:0004150|GO:0006760 KEGG: 00790+4.1.2.25|MetaCyc: PWY-6147|MetaCyc: PWY-6148|MetaCyc: PWY-6797|MetaCyc: PWY-7539 CDA09_03700 72959428b10828f8168a88caa4100262 125 TIGRFAM TIGR00526 folB_dom: FolB domain 1 115 3.6E-25 T 01-11-2018 IPR006157 Dihydroneopterin aldolase/epimerase domain GO:0004150|GO:0006760 KEGG: 00790+4.1.2.25|MetaCyc: PWY-6147|MetaCyc: PWY-6148|MetaCyc: PWY-6797|MetaCyc: PWY-7539 CDA09_03700 72959428b10828f8168a88caa4100262 125 Gene3D G3DSA:3.30.1130.10 1 118 1.6E-32 T 01-11-2018 CDA09_03700 72959428b10828f8168a88caa4100262 125 Pfam PF02152 Dihydroneopterin aldolase 4 111 2.4E-26 T 01-11-2018 IPR006157 Dihydroneopterin aldolase/epimerase domain GO:0004150|GO:0006760 KEGG: 00790+4.1.2.25|MetaCyc: PWY-6147|MetaCyc: PWY-6148|MetaCyc: PWY-6797|MetaCyc: PWY-7539 CDA09_03700 72959428b10828f8168a88caa4100262 125 SUPERFAMILY SSF55620 1 115 1.33E-30 T 01-11-2018 CDA09_22360 2c258d54839e6a5ee29c25a09660a0eb 423 TIGRFAM TIGR04474 tcm_partner: three-Cys-motif partner protein 20 298 4.9E-56 T 01-11-2018 IPR031009 Three-Cys-motif partner protein CDA09_19080 c91118a43c7661677845a7542468f28c 89 Pfam PF01402 Ribbon-helix-helix protein, copG family 9 46 1.4E-10 T 01-11-2018 IPR002145 Ribbon-helix-helix protein, CopG GO:0006355 CDA09_19080 c91118a43c7661677845a7542468f28c 89 SUPERFAMILY SSF47598 6 48 1.09E-9 T 01-11-2018 IPR010985 Ribbon-helix-helix GO:0006355 CDA09_04665 26e5ac2eede520a68d6a5cee6e99bf7d 159 SUPERFAMILY SSF46785 1 58 1.4E-19 T 01-11-2018 IPR036390 Winged helix DNA-binding domain superfamily CDA09_04665 26e5ac2eede520a68d6a5cee6e99bf7d 159 Pfam PF13412 Winged helix-turn-helix DNA-binding 1 48 1.1E-20 T 01-11-2018 CDA09_04665 26e5ac2eede520a68d6a5cee6e99bf7d 159 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 1 17 1.1E-20 T 01-11-2018 IPR000485 AsnC-type HTH domain GO:0043565 CDA09_04665 26e5ac2eede520a68d6a5cee6e99bf7d 159 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 17 28 1.1E-20 T 01-11-2018 IPR000485 AsnC-type HTH domain GO:0043565 CDA09_04665 26e5ac2eede520a68d6a5cee6e99bf7d 159 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 28 47 1.1E-20 T 01-11-2018 IPR000485 AsnC-type HTH domain GO:0043565 CDA09_04665 26e5ac2eede520a68d6a5cee6e99bf7d 159 Gene3D G3DSA:1.10.10.10 2 52 7.9E-27 T 01-11-2018 IPR036388 Winged helix-like DNA-binding domain superfamily CDA09_04665 26e5ac2eede520a68d6a5cee6e99bf7d 159 SMART SM00344 1 110 5.4E-47 T 01-11-2018 IPR019888 Transcription regulator AsnC-type GO:0003700|GO:0005622|GO:0006355|GO:0043565 CDA09_04665 26e5ac2eede520a68d6a5cee6e99bf7d 159 Pfam PF01037 Lrp/AsnC ligand binding domain 76 140 1.6E-18 T 01-11-2018 IPR019887 Transcription regulator AsnC/Lrp, ligand binding domain CDA09_04665 26e5ac2eede520a68d6a5cee6e99bf7d 159 ProSitePatterns PS00519 AsnC-type HTH domain signature. 19 45 - T 01-11-2018 IPR019885 Transcription regulator HTH, AsnC-type, conserved site CDA09_04665 26e5ac2eede520a68d6a5cee6e99bf7d 159 Gene3D G3DSA:3.30.70.920 54 138 9.0E-21 T 01-11-2018 CDA09_04665 26e5ac2eede520a68d6a5cee6e99bf7d 159 SUPERFAMILY SSF54909 64 147 5.09E-18 T 01-11-2018 IPR011008 Dimeric alpha-beta barrel CDA09_03600 377eb70236b879e565a0107024cfce42 485 SUPERFAMILY SSF54106 42 84 2.49E-9 T 01-11-2018 CDA09_03600 377eb70236b879e565a0107024cfce42 485 SMART SM00257 41 85 6.1E-9 T 01-11-2018 IPR018392 LysM domain CDA09_03600 377eb70236b879e565a0107024cfce42 485 Pfam PF11860 N-acetylmuramidase 273 482 4.7E-46 T 01-11-2018 IPR024408 N-acetylmuramidase CDA09_03600 377eb70236b879e565a0107024cfce42 485 Gene3D G3DSA:3.10.350.10 39 90 3.5E-13 T 01-11-2018 IPR036779 LysM domain superfamily CDA09_03600 377eb70236b879e565a0107024cfce42 485 Pfam PF01476 LysM domain 42 83 1.6E-10 T 01-11-2018 IPR018392 LysM domain CDA09_03100 eece352e2ded990617686b2ad5eab5b6 690 SUPERFAMILY SSF56935 212 438 1.8E-10 T 01-11-2018 CDA09_03100 eece352e2ded990617686b2ad5eab5b6 690 TIGRFAM TIGR03509 OMP_MtrB_PioB: decaheme-associated outer membrane protein, MtrB/PioB family 44 689 6.9E-103 T 01-11-2018 IPR020016 Decahaem-associated outer membrane protein, MtrB/PioB CDA09_03100 eece352e2ded990617686b2ad5eab5b6 690 SUPERFAMILY SSF56935 427 641 2.51E-7 T 01-11-2018 CDA09_03100 eece352e2ded990617686b2ad5eab5b6 690 Gene3D G3DSA:2.40.170.20 475 646 7.3E-6 T 01-11-2018 IPR036942 TonB-dependent receptor-like, beta-barrel domain superfamily CDA09_03100 eece352e2ded990617686b2ad5eab5b6 690 Pfam PF11854 Putative outer membrane beta-barrel porin, MtrB/PioB 55 689 3.7E-131 T 01-11-2018 IPR020016 Decahaem-associated outer membrane protein, MtrB/PioB CDA09_16685 557bffab3579a16986b96f79e3882af0 370 TIGRFAM TIGR01946 rnfD: electron transport complex, RnfABCDGE type, D subunit 23 357 4.4E-111 T 01-11-2018 IPR011303 Ion-translocating oxidoreductase complex Rnf, subunit D GO:0016021|GO:0022900 CDA09_16685 557bffab3579a16986b96f79e3882af0 370 Pfam PF03116 NQR2, RnfD, RnfE family 20 356 3.5E-107 T 01-11-2018 IPR004338 Ion-translocating oxidoreductase NqrB/RnfD GO:0016020|GO:0055085 CDA09_16685 557bffab3579a16986b96f79e3882af0 370 Hamap MF_00462 Ion-translocating oxidoreductase complex subunit D [rsxD]. 17 358 25.884 T 01-11-2018 IPR011303 Ion-translocating oxidoreductase complex Rnf, subunit D GO:0016021|GO:0022900 CDA09_18865 b792707f353d80464f8d1939b8d45331 288 SUPERFAMILY SSF81345 12 268 4.18E-18 T 01-11-2018 IPR037294 ABC transporter, BtuC-like CDA09_18865 b792707f353d80464f8d1939b8d45331 288 Pfam PF00950 ABC 3 transport family 12 270 1.1E-51 T 01-11-2018 IPR001626 ABC transporter, TroCD-like GO:0005887|GO:0042626|GO:0043190|GO:0055085 CDA09_23085 2311b6d2ec65835898b108bede04ca84 240 Gene3D G3DSA:3.30.420.10 118 221 5.1E-8 T 01-11-2018 IPR036397 Ribonuclease H superfamily GO:0003676 CDA09_23085 2311b6d2ec65835898b108bede04ca84 240 SUPERFAMILY SSF53098 122 203 4.93E-21 T 01-11-2018 IPR012337 Ribonuclease H-like superfamily CDA09_23085 2311b6d2ec65835898b108bede04ca84 240 Pfam PF00665 Integrase core domain 128 204 8.7E-19 T 01-11-2018 IPR001584 Integrase, catalytic core GO:0015074 CDA09_23085 2311b6d2ec65835898b108bede04ca84 240 Pfam PF13276 HTH-like domain 47 103 1.0E-15 T 01-11-2018 IPR025948 HTH-like domain CDA09_00515 b6627661c7d382eb4c7319a7903b47d2 245 ProSitePatterns PS01183 ubiE/COQ5 methyltransferase family signature 1. 33 48 - T 01-11-2018 IPR023576 UbiE/COQ5 methyltransferase, conserved site GO:0008168 KEGG: 00130+2.1.1.163|MetaCyc: PWY-5839|MetaCyc: PWY-5844|MetaCyc: PWY-5849|MetaCyc: PWY-5890|MetaCyc: PWY-5891|MetaCyc: PWY-5892|MetaCyc: PWY-5895 CDA09_00515 b6627661c7d382eb4c7319a7903b47d2 245 Hamap MF_01813 Ubiquinone/menaquinone biosynthesis C-methyltransferase UbiE [ubiE]. 13 244 36.334 T 01-11-2018 IPR004033 UbiE/COQ5 methyltransferase GO:0008168 KEGG: 00130+2.1.1.163|MetaCyc: PWY-5839|MetaCyc: PWY-5844|MetaCyc: PWY-5849|MetaCyc: PWY-5890|MetaCyc: PWY-5891|MetaCyc: PWY-5892|MetaCyc: PWY-5895|Reactome: R-HSA-2142789 CDA09_00515 b6627661c7d382eb4c7319a7903b47d2 245 Gene3D G3DSA:3.40.50.150 28 245 1.8E-67 T 01-11-2018 CDA09_00515 b6627661c7d382eb4c7319a7903b47d2 245 Pfam PF01209 ubiE/COQ5 methyltransferase family 17 244 1.5E-85 T 01-11-2018 IPR004033 UbiE/COQ5 methyltransferase GO:0008168 KEGG: 00130+2.1.1.163|MetaCyc: PWY-5839|MetaCyc: PWY-5844|MetaCyc: PWY-5849|MetaCyc: PWY-5890|MetaCyc: PWY-5891|MetaCyc: PWY-5892|MetaCyc: PWY-5895|Reactome: R-HSA-2142789 CDA09_00515 b6627661c7d382eb4c7319a7903b47d2 245 SUPERFAMILY SSF53335 1 235 5.0E-46 T 01-11-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase CDA09_00515 b6627661c7d382eb4c7319a7903b47d2 245 TIGRFAM TIGR01934 MenG_MenH_UbiE: ubiquinone/menaquinone biosynthesis methyltransferase 22 244 7.8E-75 T 01-11-2018 IPR004033 UbiE/COQ5 methyltransferase GO:0008168 KEGG: 00130+2.1.1.163|MetaCyc: PWY-5839|MetaCyc: PWY-5844|MetaCyc: PWY-5849|MetaCyc: PWY-5890|MetaCyc: PWY-5891|MetaCyc: PWY-5892|MetaCyc: PWY-5895|Reactome: R-HSA-2142789 CDA09_00515 b6627661c7d382eb4c7319a7903b47d2 245 ProSitePatterns PS01184 ubiE/COQ5 methyltransferase family signature 2. 153 167 - T 01-11-2018 IPR023576 UbiE/COQ5 methyltransferase, conserved site GO:0008168 KEGG: 00130+2.1.1.163|MetaCyc: PWY-5839|MetaCyc: PWY-5844|MetaCyc: PWY-5849|MetaCyc: PWY-5890|MetaCyc: PWY-5891|MetaCyc: PWY-5892|MetaCyc: PWY-5895 CDA09_10365 27d369bf1e006a858c09c4039c4bdfcc 395 Gene3D G3DSA:3.40.50.300 8 221 1.4E-12 T 01-11-2018 CDA09_10365 27d369bf1e006a858c09c4039c4bdfcc 395 SUPERFAMILY SSF52540 6 285 2.31E-18 T 01-11-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CDA09_10365 27d369bf1e006a858c09c4039c4bdfcc 395 Pfam PF13191 AAA ATPase domain 19 205 3.1E-18 T 01-11-2018 CDA09_06960 b33b9ab9b10686048480469e2e12b471 349 PIRSF PIRSF004930 1 337 2.6E-109 T 01-11-2018 IPR010923 tRNA threonylcarbamoyladenosine biosynthesis protein SUA5 CDA09_06960 b33b9ab9b10686048480469e2e12b471 349 Pfam PF03481 Putative GTP-binding controlling metal-binding 196 333 1.7E-18 T 01-11-2018 IPR005145 Putative GTP-binding controlling metal-binding domain CDA09_06960 b33b9ab9b10686048480469e2e12b471 349 Pfam PF01300 Telomere recombination 14 189 2.6E-59 T 01-11-2018 IPR006070 YrdC-like domain GO:0003725 CDA09_06960 b33b9ab9b10686048480469e2e12b471 349 Gene3D G3DSA:3.40.50.11030 216 338 5.9E-15 T 01-11-2018 IPR038385 Threonylcarbamoyl-AMP synthase, C-terminal domain superfamily CDA09_06960 b33b9ab9b10686048480469e2e12b471 349 SUPERFAMILY SSF55821 6 201 2.87E-65 T 01-11-2018 IPR017945 DHBP synthase RibB-like alpha/beta domain superfamily CDA09_06960 b33b9ab9b10686048480469e2e12b471 349 TIGRFAM TIGR00057 TIGR00057: tRNA threonylcarbamoyl adenosine modification protein, Sua5/YciO/YrdC/YwlC family 5 198 1.1E-61 T 01-11-2018 IPR006070 YrdC-like domain GO:0003725 CDA09_06960 b33b9ab9b10686048480469e2e12b471 349 Gene3D G3DSA:3.90.870.10 1 205 2.9E-85 T 01-11-2018 CDA09_15080 d60597c0b75d9107a69974677970f439 73 SUPERFAMILY SSF55331 2 66 7.61E-15 T 01-11-2018 IPR014347 Tautomerase/MIF superfamily CDA09_15080 d60597c0b75d9107a69974677970f439 73 Gene3D G3DSA:3.30.429.10 1 59 1.3E-17 T 01-11-2018 IPR014347 Tautomerase/MIF superfamily CDA09_15080 d60597c0b75d9107a69974677970f439 73 Pfam PF01361 Tautomerase enzyme 2 56 1.1E-11 T 01-11-2018 IPR004370 4-oxalocrotonate tautomerase GO:0006725|GO:0016853 CDA09_20830 492c821465b113063ebf055fe1082a48 344 SUPERFAMILY SSF54752 269 326 2.88E-21 T 01-11-2018 IPR023400 DNA recombination and repair protein RecA, C-terminal CDA09_20830 492c821465b113063ebf055fe1082a48 344 ProSitePatterns PS00321 recA signature. 214 222 - T 01-11-2018 IPR020584 DNA recombination/repair protein RecA, conserved site GO:0003677|GO:0005524|GO:0006259|GO:0008094 CDA09_20830 492c821465b113063ebf055fe1082a48 344 SMART SM00382 58 229 4.1E-11 T 01-11-2018 IPR003593 AAA+ ATPase domain CDA09_20830 492c821465b113063ebf055fe1082a48 344 PRINTS PR00142 RecA protein signature 94 123 7.2E-84 T 01-11-2018 IPR013765 DNA recombination and repair protein RecA GO:0003697|GO:0005524|GO:0006281 CDA09_20830 492c821465b113063ebf055fe1082a48 344 PRINTS PR00142 RecA protein signature 128 157 7.2E-84 T 01-11-2018 IPR013765 DNA recombination and repair protein RecA GO:0003697|GO:0005524|GO:0006281 CDA09_20830 492c821465b113063ebf055fe1082a48 344 PRINTS PR00142 RecA protein signature 244 273 7.2E-84 T 01-11-2018 IPR013765 DNA recombination and repair protein RecA GO:0003697|GO:0005524|GO:0006281 CDA09_20830 492c821465b113063ebf055fe1082a48 344 PRINTS PR00142 RecA protein signature 298 315 7.2E-84 T 01-11-2018 IPR013765 DNA recombination and repair protein RecA GO:0003697|GO:0005524|GO:0006281 CDA09_20830 492c821465b113063ebf055fe1082a48 344 PRINTS PR00142 RecA protein signature 211 239 7.2E-84 T 01-11-2018 IPR013765 DNA recombination and repair protein RecA GO:0003697|GO:0005524|GO:0006281 CDA09_20830 492c821465b113063ebf055fe1082a48 344 PRINTS PR00142 RecA protein signature 166 195 7.2E-84 T 01-11-2018 IPR013765 DNA recombination and repair protein RecA GO:0003697|GO:0005524|GO:0006281 CDA09_20830 492c821465b113063ebf055fe1082a48 344 SUPERFAMILY SSF52540 4 268 2.99E-67 T 01-11-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CDA09_20830 492c821465b113063ebf055fe1082a48 344 TIGRFAM TIGR02012 tigrfam_recA: protein RecA 4 324 1.8E-169 T 01-11-2018 IPR013765 DNA recombination and repair protein RecA GO:0003697|GO:0005524|GO:0006281 CDA09_20830 492c821465b113063ebf055fe1082a48 344 Pfam PF00154 recA bacterial DNA recombination protein 7 269 5.7E-143 T 01-11-2018 IPR013765 DNA recombination and repair protein RecA GO:0003697|GO:0005524|GO:0006281 CDA09_20830 492c821465b113063ebf055fe1082a48 344 Hamap MF_00268 Protein RecA [recA]. 5 330 51.28 T 01-11-2018 IPR013765 DNA recombination and repair protein RecA GO:0003697|GO:0005524|GO:0006281 CDA09_20830 492c821465b113063ebf055fe1082a48 344 Gene3D G3DSA:3.30.250.10 270 344 8.9E-28 T 01-11-2018 IPR023400 DNA recombination and repair protein RecA, C-terminal CDA09_20830 492c821465b113063ebf055fe1082a48 344 Gene3D G3DSA:3.40.50.300 26 269 2.9E-82 T 01-11-2018 CDA09_09260 355e33f39458baa2a7932aa48aa52323 132 Pfam PF12172 Rubredoxin-like zinc ribbon domain (DUF35_N) 23 59 4.3E-11 T 01-11-2018 IPR022002 Domain of unknown function DUF35, rubredoxin-like zinc ribbon domain, N-terminal CDA09_09260 355e33f39458baa2a7932aa48aa52323 132 Pfam PF01796 DUF35 OB-fold domain, acyl-CoA-associated 59 118 2.9E-20 T 01-11-2018 IPR002878 Domain of unknown function DUF35, OB-fold, C-terminal CDA09_09260 355e33f39458baa2a7932aa48aa52323 132 SUPERFAMILY SSF50249 12 125 2.06E-32 T 01-11-2018 IPR012340 Nucleic acid-binding, OB-fold CDA09_21985 30c1f489e03135efc88eec853ad4dc63 250 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 18 241 1.3E-38 T 01-11-2018 CDA09_21985 30c1f489e03135efc88eec853ad4dc63 250 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 155 174 2.3E-7 T 01-11-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CDA09_21985 30c1f489e03135efc88eec853ad4dc63 250 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 136 144 2.3E-7 T 01-11-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CDA09_21985 30c1f489e03135efc88eec853ad4dc63 250 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 83 94 2.3E-7 T 01-11-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CDA09_21985 30c1f489e03135efc88eec853ad4dc63 250 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 176 193 4.5E-28 T 01-11-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CDA09_21985 30c1f489e03135efc88eec853ad4dc63 250 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 130 146 4.5E-28 T 01-11-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CDA09_21985 30c1f489e03135efc88eec853ad4dc63 250 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 9 26 4.5E-28 T 01-11-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CDA09_21985 30c1f489e03135efc88eec853ad4dc63 250 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 83 94 4.5E-28 T 01-11-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CDA09_21985 30c1f489e03135efc88eec853ad4dc63 250 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 155 174 4.5E-28 T 01-11-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CDA09_21985 30c1f489e03135efc88eec853ad4dc63 250 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 206 226 4.5E-28 T 01-11-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CDA09_21985 30c1f489e03135efc88eec853ad4dc63 250 SUPERFAMILY SSF51735 6 244 1.57E-55 T 01-11-2018 IPR036291 NAD(P)-binding domain superfamily CDA09_21985 30c1f489e03135efc88eec853ad4dc63 250 Gene3D G3DSA:3.40.50.720 2 246 1.3E-50 T 01-11-2018 CDA09_19680 445fb35c91af8cf2cd0384c6026f7ca6 388 Pfam PF02772 S-adenosylmethionine synthetase, central domain 116 234 1.8E-41 T 01-11-2018 IPR022629 S-adenosylmethionine synthetase, central domain GO:0004478|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: R-HSA-156581 CDA09_19680 445fb35c91af8cf2cd0384c6026f7ca6 388 ProSitePatterns PS00377 S-adenosylmethionine synthase signature 2. 262 270 - T 01-11-2018 IPR022631 S-adenosylmethionine synthetase, conserved site GO:0004478|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: R-HSA-156581 CDA09_19680 445fb35c91af8cf2cd0384c6026f7ca6 388 SUPERFAMILY SSF55973 236 385 1.61E-67 T 01-11-2018 IPR022636 S-adenosylmethionine synthetase superfamily GO:0004478|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: R-HSA-156581 CDA09_19680 445fb35c91af8cf2cd0384c6026f7ca6 388 Pfam PF02773 S-adenosylmethionine synthetase, C-terminal domain 236 375 4.5E-67 T 01-11-2018 IPR022630 S-adenosylmethionine synthetase, C-terminal GO:0004478|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: R-HSA-156581 CDA09_19680 445fb35c91af8cf2cd0384c6026f7ca6 388 ProSitePatterns PS00376 S-adenosylmethionine synthase signature 1. 118 128 - T 01-11-2018 IPR022631 S-adenosylmethionine synthetase, conserved site GO:0004478|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: R-HSA-156581 CDA09_19680 445fb35c91af8cf2cd0384c6026f7ca6 388 Pfam PF00438 S-adenosylmethionine synthetase, N-terminal domain 4 101 2.5E-41 T 01-11-2018 IPR022628 S-adenosylmethionine synthetase, N-terminal GO:0004478|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: R-HSA-156581 CDA09_19680 445fb35c91af8cf2cd0384c6026f7ca6 388 Gene3D G3DSA:3.30.300.10 11 273 4.8E-174 T 01-11-2018 CDA09_19680 445fb35c91af8cf2cd0384c6026f7ca6 388 SUPERFAMILY SSF55973 116 235 3.92E-45 T 01-11-2018 IPR022636 S-adenosylmethionine synthetase superfamily GO:0004478|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: R-HSA-156581 CDA09_19680 445fb35c91af8cf2cd0384c6026f7ca6 388 PIRSF PIRSF000497 1 387 2.2E-168 T 01-11-2018 IPR002133 S-adenosylmethionine synthetase GO:0004478|GO:0005524|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: R-HSA-156581 CDA09_19680 445fb35c91af8cf2cd0384c6026f7ca6 388 SUPERFAMILY SSF55973 3 110 3.3E-46 T 01-11-2018 IPR022636 S-adenosylmethionine synthetase superfamily GO:0004478|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: R-HSA-156581 CDA09_19680 445fb35c91af8cf2cd0384c6026f7ca6 388 Gene3D G3DSA:3.30.300.10 5 236 4.8E-174 T 01-11-2018 CDA09_19680 445fb35c91af8cf2cd0384c6026f7ca6 388 Gene3D G3DSA:3.30.300.10 102 378 4.8E-174 T 01-11-2018 CDA09_19680 445fb35c91af8cf2cd0384c6026f7ca6 388 Hamap MF_00086 S-adenosylmethionine synthase [metK]. 2 386 55.326 T 01-11-2018 IPR002133 S-adenosylmethionine synthetase GO:0004478|GO:0005524|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: R-HSA-156581 CDA09_19680 445fb35c91af8cf2cd0384c6026f7ca6 388 TIGRFAM TIGR01034 metK: methionine adenosyltransferase 5 384 9.7E-179 T 01-11-2018 IPR002133 S-adenosylmethionine synthetase GO:0004478|GO:0005524|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: R-HSA-156581 CDA09_18680 45d88ca51901d2c0bcbb7a49f60a9d0e 480 SUPERFAMILY SSF161093 308 479 5.75E-48 T 01-11-2018 IPR036739 SLC41 divalent cation transporters, integral membrane domain superfamily GO:0006812|GO:0008324 CDA09_18680 45d88ca51901d2c0bcbb7a49f60a9d0e 480 Gene3D G3DSA:1.25.60.10 37 161 1.3E-16 T 01-11-2018 IPR038076 MgtE, N-terminal domain superfamily CDA09_18680 45d88ca51901d2c0bcbb7a49f60a9d0e 480 Pfam PF00571 CBS domain 230 286 3.5E-6 T 01-11-2018 IPR000644 CBS domain CDA09_18680 45d88ca51901d2c0bcbb7a49f60a9d0e 480 Pfam PF00571 CBS domain 166 222 5.3E-6 T 01-11-2018 IPR000644 CBS domain CDA09_18680 45d88ca51901d2c0bcbb7a49f60a9d0e 480 SMART SM00924 63 166 1.7E-33 T 01-11-2018 IPR006668 Magnesium transporter, MgtE intracellular domain CDA09_18680 45d88ca51901d2c0bcbb7a49f60a9d0e 480 SUPERFAMILY SSF54631 165 305 4.15E-29 T 01-11-2018 CDA09_18680 45d88ca51901d2c0bcbb7a49f60a9d0e 480 Pfam PF01769 Divalent cation transporter 351 472 4.2E-24 T 01-11-2018 IPR006667 SLC41 divalent cation transporters, integral membrane domain GO:0006812|GO:0008324 CDA09_18680 45d88ca51901d2c0bcbb7a49f60a9d0e 480 SMART SM00116 238 286 2.7E-4 T 01-11-2018 IPR000644 CBS domain CDA09_18680 45d88ca51901d2c0bcbb7a49f60a9d0e 480 SMART SM00116 173 226 0.02 T 01-11-2018 IPR000644 CBS domain CDA09_18680 45d88ca51901d2c0bcbb7a49f60a9d0e 480 Gene3D G3DSA:1.10.357.20 305 479 2.6E-45 T 01-11-2018 IPR038048 Magnesium transporter MgtE, transmembrane domain CDA09_18680 45d88ca51901d2c0bcbb7a49f60a9d0e 480 SUPERFAMILY SSF158791 44 163 5.23E-27 T 01-11-2018 CDA09_18680 45d88ca51901d2c0bcbb7a49f60a9d0e 480 Pfam PF03448 MgtE intracellular N domain 63 164 1.5E-23 T 01-11-2018 IPR006668 Magnesium transporter, MgtE intracellular domain CDA09_18680 45d88ca51901d2c0bcbb7a49f60a9d0e 480 TIGRFAM TIGR00400 mgtE: magnesium transporter 44 479 4.2E-85 T 01-11-2018 IPR006669 Magnesium transporter MgtE GO:0015095|GO:0015693|GO:0016020 CDA09_18680 45d88ca51901d2c0bcbb7a49f60a9d0e 480 Gene3D G3DSA:3.10.580.10 162 290 7.5E-40 T 01-11-2018 CDA09_09935 1ad0883c212e17846f8135c7edfa6ca5 477 ProSitePatterns PS00687 Aldehyde dehydrogenases glutamic acid active site. 219 226 - T 01-11-2018 IPR029510 Aldehyde dehydrogenase, glutamic acid active site GO:0016491|GO:0055114 CDA09_09935 1ad0883c212e17846f8135c7edfa6ca5 477 Gene3D G3DSA:3.40.309.10 223 425 3.0E-134 T 01-11-2018 IPR016163 Aldehyde dehydrogenase, C-terminal GO:0016491|GO:0016620|GO:0055114 CDA09_09935 1ad0883c212e17846f8135c7edfa6ca5 477 Gene3D G3DSA:3.40.605.10 21 445 3.0E-134 T 01-11-2018 IPR016162 Aldehyde dehydrogenase, N-terminal GO:0016491|GO:0055114 CDA09_09935 1ad0883c212e17846f8135c7edfa6ca5 477 PIRSF PIRSF036492 1 476 3.6E-138 T 01-11-2018 IPR012394 Aldehyde dehydrogenase NAD(P)-dependent GO:0006081|GO:0055114 CDA09_09935 1ad0883c212e17846f8135c7edfa6ca5 477 Pfam PF00171 Aldehyde dehydrogenase family 7 445 1.0E-84 T 01-11-2018 IPR015590 Aldehyde dehydrogenase domain GO:0016491|GO:0055114 CDA09_09935 1ad0883c212e17846f8135c7edfa6ca5 477 SUPERFAMILY SSF53720 5 446 9.29E-106 T 01-11-2018 IPR016161 Aldehyde/histidinol dehydrogenase GO:0016491|GO:0055114 CDA09_17835 85dbe908f6ca26a00ae51618ba5b9aec 606 TIGRFAM TIGR00614 recQ_fam: ATP-dependent DNA helicase, RecQ family 12 464 1.1E-153 T 01-11-2018 IPR004589 DNA helicase, ATP-dependent, RecQ type GO:0006310|GO:0008026 CDA09_17835 85dbe908f6ca26a00ae51618ba5b9aec 606 SUPERFAMILY SSF52540 208 459 6.55E-61 T 01-11-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CDA09_17835 85dbe908f6ca26a00ae51618ba5b9aec 606 SMART SM00490 251 332 7.0E-25 T 01-11-2018 IPR001650 Helicase, C-terminal CDA09_17835 85dbe908f6ca26a00ae51618ba5b9aec 606 Pfam PF16124 RecQ zinc-binding 344 405 3.4E-18 T 01-11-2018 IPR032284 ATP-dependent DNA helicase RecQ, zinc-binding domain CDA09_17835 85dbe908f6ca26a00ae51618ba5b9aec 606 Gene3D G3DSA:3.40.50.300 210 341 2.3E-39 T 01-11-2018 CDA09_17835 85dbe908f6ca26a00ae51618ba5b9aec 606 Gene3D G3DSA:3.40.50.300 7 209 1.1E-76 T 01-11-2018 CDA09_17835 85dbe908f6ca26a00ae51618ba5b9aec 606 Pfam PF00271 Helicase conserved C-terminal domain 226 331 6.6E-16 T 01-11-2018 IPR001650 Helicase, C-terminal CDA09_17835 85dbe908f6ca26a00ae51618ba5b9aec 606 Pfam PF00570 HRDC domain 537 602 1.4E-23 T 01-11-2018 IPR002121 HRDC domain GO:0003676|GO:0005622 CDA09_17835 85dbe908f6ca26a00ae51618ba5b9aec 606 SMART SM00341 532 605 1.5E-11 T 01-11-2018 IPR002121 HRDC domain GO:0003676|GO:0005622 CDA09_17835 85dbe908f6ca26a00ae51618ba5b9aec 606 SUPERFAMILY SSF52540 11 201 1.92E-38 T 01-11-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CDA09_17835 85dbe908f6ca26a00ae51618ba5b9aec 606 Gene3D G3DSA:1.10.150.80 536 605 3.7E-24 T 01-11-2018 CDA09_17835 85dbe908f6ca26a00ae51618ba5b9aec 606 SUPERFAMILY SSF47819 530 604 3.05E-24 T 01-11-2018 IPR010997 HRDC-like superfamily GO:0000166|GO:0003824|GO:0044237 CDA09_17835 85dbe908f6ca26a00ae51618ba5b9aec 606 Gene3D G3DSA:1.10.10.10 342 525 1.8E-48 T 01-11-2018 IPR036388 Winged helix-like DNA-binding domain superfamily CDA09_17835 85dbe908f6ca26a00ae51618ba5b9aec 606 Pfam PF09382 RQC domain 407 518 3.6E-38 T 01-11-2018 IPR018982 RQC domain GO:0006260|GO:0006281|GO:0043140 Reactome: R-HSA-3108214|Reactome: R-HSA-5685938|Reactome: R-HSA-5685942|Reactome: R-HSA-5693554|Reactome: R-HSA-5693568|Reactome: R-HSA-5693579|Reactome: R-HSA-5693607|Reactome: R-HSA-5693616|Reactome: R-HSA-6804756|Reactome: R-HSA-69473 CDA09_17835 85dbe908f6ca26a00ae51618ba5b9aec 606 SMART SM00487 18 216 9.5E-25 T 01-11-2018 IPR014001 Helicase superfamily 1/2, ATP-binding domain CDA09_17835 85dbe908f6ca26a00ae51618ba5b9aec 606 SMART SM00956 412 515 3.5E-52 T 01-11-2018 IPR018982 RQC domain GO:0006260|GO:0006281|GO:0043140 Reactome: R-HSA-3108214|Reactome: R-HSA-5685938|Reactome: R-HSA-5685942|Reactome: R-HSA-5693554|Reactome: R-HSA-5693568|Reactome: R-HSA-5693579|Reactome: R-HSA-5693607|Reactome: R-HSA-5693616|Reactome: R-HSA-6804756|Reactome: R-HSA-69473 CDA09_17835 85dbe908f6ca26a00ae51618ba5b9aec 606 Pfam PF00270 DEAD/DEAH box helicase 26 188 2.0E-16 T 01-11-2018 IPR011545 DEAD/DEAH box helicase domain GO:0003676|GO:0005524 CDA09_17835 85dbe908f6ca26a00ae51618ba5b9aec 606 TIGRFAM TIGR01389 recQ: ATP-dependent DNA helicase RecQ 11 604 6.8E-239 T 01-11-2018 IPR006293 DNA helicase, ATP-dependent, RecQ type, bacterial GO:0004003|GO:0006310|GO:0009432 CDA09_04745 574936c71f9a00ae95a918b0da2a7c2a 574 Gene3D G3DSA:3.40.50.970 353 546 1.2E-53 T 01-11-2018 CDA09_04745 574936c71f9a00ae95a918b0da2a7c2a 574 SUPERFAMILY SSF52518 7 180 2.85E-41 T 01-11-2018 IPR029061 Thiamin diphosphate-binding fold CDA09_04745 574936c71f9a00ae95a918b0da2a7c2a 574 Gene3D G3DSA:3.40.50.970 2 183 1.2E-53 T 01-11-2018 CDA09_04745 574936c71f9a00ae95a918b0da2a7c2a 574 SUPERFAMILY SSF52467 159 353 1.92E-29 T 01-11-2018 IPR029035 DHS-like NAD/FAD-binding domain superfamily CDA09_04745 574936c71f9a00ae95a918b0da2a7c2a 574 Gene3D G3DSA:3.40.50.1220 190 352 4.9E-28 T 01-11-2018 CDA09_04745 574936c71f9a00ae95a918b0da2a7c2a 574 Pfam PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain 404 533 8.6E-30 T 01-11-2018 IPR011766 Thiamine pyrophosphate enzyme, C-terminal TPP-binding GO:0003824|GO:0030976 CDA09_04745 574936c71f9a00ae95a918b0da2a7c2a 574 SUPERFAMILY SSF52518 369 540 9.47E-48 T 01-11-2018 IPR029061 Thiamin diphosphate-binding fold CDA09_04745 574936c71f9a00ae95a918b0da2a7c2a 574 Pfam PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain 9 175 1.0E-48 T 01-11-2018 IPR012001 Thiamine pyrophosphate enzyme, N-terminal TPP-binding domain GO:0030976 CDA09_04745 574936c71f9a00ae95a918b0da2a7c2a 574 Pfam PF00205 Thiamine pyrophosphate enzyme, central domain 198 323 2.9E-15 T 01-11-2018 IPR012000 Thiamine pyrophosphate enzyme, central domain GO:0000287|GO:0030976 CDA09_09585 67ffb300a18b7a176ff0d9360a9af852 622 Gene3D G3DSA:3.30.300.30 478 579 7.0E-6 T 01-11-2018 CDA09_09585 67ffb300a18b7a176ff0d9360a9af852 622 SUPERFAMILY SSF56801 37 606 7.59E-106 T 01-11-2018 CDA09_09585 67ffb300a18b7a176ff0d9360a9af852 622 ProSitePatterns PS00455 Putative AMP-binding domain signature. 215 226 - T 01-11-2018 IPR020845 AMP-binding, conserved site CDA09_09585 67ffb300a18b7a176ff0d9360a9af852 622 Pfam PF00501 AMP-binding enzyme 50 483 4.4E-77 T 01-11-2018 IPR000873 AMP-dependent synthetase/ligase GO:0003824 CDA09_09585 67ffb300a18b7a176ff0d9360a9af852 622 Gene3D G3DSA:3.40.50.12780 15 476 2.3E-83 T 01-11-2018 CDA09_13880 3539f0324ea309da7054a8542d462cdb 169 Pfam PF02627 Carboxymuconolactone decarboxylase family 42 118 8.0E-7 T 01-11-2018 IPR003779 Carboxymuconolactone decarboxylase-like GO:0051920|GO:0055114 KEGG: 00480+1.11.1.15 CDA09_13880 3539f0324ea309da7054a8542d462cdb 169 Gene3D G3DSA:1.20.1290.10 30 168 5.3E-24 T 01-11-2018 IPR029032 AhpD-like Reactome: R-HSA-5628897 CDA09_13880 3539f0324ea309da7054a8542d462cdb 169 SUPERFAMILY SSF69118 1 163 4.06E-27 T 01-11-2018 IPR029032 AhpD-like Reactome: R-HSA-5628897 CDA09_12890 4d5b54d4df499cc1df1e4a73a2fa8c95 355 SMART SM00382 27 214 2.1E-20 T 01-11-2018 IPR003593 AAA+ ATPase domain CDA09_12890 4d5b54d4df499cc1df1e4a73a2fa8c95 355 SUPERFAMILY SSF50331 254 340 1.8E-11 T 01-11-2018 IPR008995 Molybdate/tungstate binding, C-terminal CDA09_12890 4d5b54d4df499cc1df1e4a73a2fa8c95 355 SUPERFAMILY SSF52540 3 245 8.52E-88 T 01-11-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CDA09_12890 4d5b54d4df499cc1df1e4a73a2fa8c95 355 Pfam PF12857 TOBE-like domain 280 335 2.5E-15 T 01-11-2018 IPR024765 TOBE-like domain KEGG: 00920+3.6.3.25 CDA09_12890 4d5b54d4df499cc1df1e4a73a2fa8c95 355 ProSitePatterns PS00211 ABC transporters family signature. 137 151 - T 01-11-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 CDA09_12890 4d5b54d4df499cc1df1e4a73a2fa8c95 355 TIGRFAM TIGR00968 3a0106s01: sulfate ABC transporter, ATP-binding protein 3 242 6.8E-119 T 01-11-2018 IPR005666 Sulphate transport system permease protein 1 GO:0008272|GO:0015419|GO:0016020|GO:0043190 KEGG: 00920+3.6.3.25 CDA09_12890 4d5b54d4df499cc1df1e4a73a2fa8c95 355 Gene3D G3DSA:3.40.50.300 2 264 4.2E-81 T 01-11-2018 CDA09_12890 4d5b54d4df499cc1df1e4a73a2fa8c95 355 Pfam PF00005 ABC transporter 18 164 8.7E-36 T 01-11-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 CDA09_07035 42744c73dfaa02b18edb43047ad1e3b0 168 Pfam PF03350 Uncharacterized protein family, UPF0114 12 129 3.3E-34 T 01-11-2018 IPR005134 Uncharacterised protein family UPF0114 CDA09_07035 42744c73dfaa02b18edb43047ad1e3b0 168 TIGRFAM TIGR00645 HI0507: TIGR00645 family protein 6 164 1.0E-50 T 01-11-2018 IPR020761 Uncharacterised protein family UPF0114, bacteria CDA09_07035 42744c73dfaa02b18edb43047ad1e3b0 168 Hamap MF_00143 UPF0114 protein YqhA [yqhA]. 1 168 74.676 T 01-11-2018 IPR020761 Uncharacterised protein family UPF0114, bacteria CDA09_16840 7bb7045544d4fd78659a5440496b6877 147 Pfam PF00582 Universal stress protein family 1 147 1.4E-32 T 01-11-2018 IPR006016 UspA CDA09_16840 7bb7045544d4fd78659a5440496b6877 147 PRINTS PR01438 Universal stress protein signature 2 20 3.7E-16 T 01-11-2018 IPR006015 Universal stress protein A CDA09_16840 7bb7045544d4fd78659a5440496b6877 147 PRINTS PR01438 Universal stress protein signature 125 147 3.7E-16 T 01-11-2018 IPR006015 Universal stress protein A CDA09_16840 7bb7045544d4fd78659a5440496b6877 147 PRINTS PR01438 Universal stress protein signature 107 119 3.7E-16 T 01-11-2018 IPR006015 Universal stress protein A CDA09_16840 7bb7045544d4fd78659a5440496b6877 147 Gene3D G3DSA:3.40.50.620 1 146 3.4E-36 T 01-11-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold CDA09_16840 7bb7045544d4fd78659a5440496b6877 147 SUPERFAMILY SSF52402 1 147 3.35E-35 T 01-11-2018 CDA09_09075 144584986cd781b0d45db9ca40ec4c0b 533 Gene3D G3DSA:3.30.200.20 32 141 2.0E-16 T 01-11-2018 CDA09_09075 144584986cd781b0d45db9ca40ec4c0b 533 Gene3D G3DSA:3.90.1200.10 147 355 2.2E-25 T 01-11-2018 CDA09_09075 144584986cd781b0d45db9ca40ec4c0b 533 Pfam PF01636 Phosphotransferase enzyme family 58 280 4.4E-22 T 01-11-2018 IPR002575 Aminoglycoside phosphotransferase CDA09_09075 144584986cd781b0d45db9ca40ec4c0b 533 SUPERFAMILY SSF56112 36 340 5.98E-27 T 01-11-2018 IPR011009 Protein kinase-like domain superfamily CDA09_19580 d097e72a1bf5610b2c0cd3840770a278 143 Gene3D G3DSA:3.30.1550.10 2 72 2.3E-35 T 01-11-2018 IPR036796 Ribosomal protein L11/L12, N-terminal domain superfamily CDA09_19580 d097e72a1bf5610b2c0cd3840770a278 143 ProDom PD001367 RIBOSOMAL RIBONUCLEOPROTEIN L11 RRNA-BINDING RNA-BINDING METHYLATION 50S L11 BACTERIAL CHLOROPLAST 36 74 3.0E-16 T 01-11-2018 CDA09_19580 d097e72a1bf5610b2c0cd3840770a278 143 SUPERFAMILY SSF54747 3 73 6.41E-31 T 01-11-2018 IPR036796 Ribosomal protein L11/L12, N-terminal domain superfamily CDA09_19580 d097e72a1bf5610b2c0cd3840770a278 143 Hamap MF_00736 50S ribosomal protein L11 [rplK]. 5 142 31.766 T 01-11-2018 IPR000911 Ribosomal protein L11/L12 GO:0003735|GO:0005840|GO:0006412 CDA09_19580 d097e72a1bf5610b2c0cd3840770a278 143 SUPERFAMILY SSF46906 68 141 7.2E-28 T 01-11-2018 IPR036769 Ribosomal protein L11, C-terminal domain superfamily CDA09_19580 d097e72a1bf5610b2c0cd3840770a278 143 Gene3D G3DSA:1.10.10.250 73 141 2.1E-28 T 01-11-2018 IPR036769 Ribosomal protein L11, C-terminal domain superfamily CDA09_19580 d097e72a1bf5610b2c0cd3840770a278 143 ProSitePatterns PS00359 Ribosomal protein L11 signature. 127 142 - T 01-11-2018 IPR020785 Ribosomal protein L11, conserved site GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 CDA09_19580 d097e72a1bf5610b2c0cd3840770a278 143 Pfam PF03946 Ribosomal protein L11, N-terminal domain 9 67 6.6E-30 T 01-11-2018 IPR020784 Ribosomal protein L11, N-terminal CDA09_19580 d097e72a1bf5610b2c0cd3840770a278 143 Pfam PF00298 Ribosomal protein L11, RNA binding domain 72 140 1.7E-25 T 01-11-2018 IPR020783 Ribosomal protein L11, C-terminal GO:0003735|GO:0005840|GO:0006412 CDA09_19580 d097e72a1bf5610b2c0cd3840770a278 143 TIGRFAM TIGR01632 L11_bact: ribosomal protein uL11 3 141 1.8E-66 T 01-11-2018 IPR006519 Ribosomal protein L11, bacterial-type GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 CDA09_19580 d097e72a1bf5610b2c0cd3840770a278 143 SMART SM00649 9 141 1.5E-86 T 01-11-2018 IPR000911 Ribosomal protein L11/L12 GO:0003735|GO:0005840|GO:0006412 CDA09_19670 999cef57daeb0c831f2ebd4dff8deb69 154 Gene3D G3DSA:2.30.110.10 5 135 8.4E-15 T 01-11-2018 IPR012349 FMN-binding split barrel GO:0048037 CDA09_19670 999cef57daeb0c831f2ebd4dff8deb69 154 SUPERFAMILY SSF50475 5 133 1.49E-9 T 01-11-2018 CDA09_14450 156524bef0565df6e86507fab216455e 436 SUPERFAMILY SSF51905 2 430 5.18E-52 T 01-11-2018 IPR036188 FAD/NAD(P)-binding domain superfamily CDA09_14450 156524bef0565df6e86507fab216455e 436 PRINTS PR00419 Adrenodoxin reductase family signature 27 40 1.3E-8 T 01-11-2018 CDA09_14450 156524bef0565df6e86507fab216455e 436 PRINTS PR00419 Adrenodoxin reductase family signature 4 26 1.3E-8 T 01-11-2018 CDA09_14450 156524bef0565df6e86507fab216455e 436 TIGRFAM TIGR03467 HpnE: squalene-associated FAD-dependent desaturase 5 428 1.1E-149 T 01-11-2018 IPR017830 Hydroxysqualene dehydroxylase HpnE MetaCyc: PWY-7072 CDA09_14450 156524bef0565df6e86507fab216455e 436 Pfam PF01593 Flavin containing amine oxidoreductase 13 428 6.7E-28 T 01-11-2018 IPR002937 Amine oxidase GO:0016491|GO:0055114 CDA09_14450 156524bef0565df6e86507fab216455e 436 Gene3D G3DSA:3.50.50.60 1 435 7.9E-27 T 01-11-2018 IPR036188 FAD/NAD(P)-binding domain superfamily CDA09_17795 a3b402e86d5700d68cb816934e4b5ed3 283 Pfam PF00510 Cytochrome c oxidase subunit III 8 282 4.6E-59 T 01-11-2018 IPR000298 Cytochrome c oxidase subunit III-like GO:0015002|GO:0016020 Reactome: R-HSA-5628897|Reactome: R-HSA-611105 CDA09_17795 a3b402e86d5700d68cb816934e4b5ed3 283 Gene3D G3DSA:1.10.287.70 1 71 2.1E-19 T 01-11-2018 CDA09_17795 a3b402e86d5700d68cb816934e4b5ed3 283 SUPERFAMILY SSF81452 4 283 2.22E-80 T 01-11-2018 IPR035973 Cytochrome c oxidase subunit III-like superfamily GO:0015002|GO:0016020 Reactome: R-HSA-5628897|Reactome: R-HSA-611105 CDA09_17795 a3b402e86d5700d68cb816934e4b5ed3 283 Gene3D G3DSA:1.20.120.80 72 283 1.7E-66 T 01-11-2018 IPR013833 Cytochrome c oxidase, subunit III, 4-helical bundle GO:0004129|GO:0016020|GO:0022904 Reactome: R-HSA-5628897|Reactome: R-HSA-611105 CDA09_11825 7185d1d85e492154f66485759859f6f6 277 Pfam PF11227 Protein of unknown function (DUF3025) 65 267 2.8E-69 T 01-11-2018 IPR021390 Protein of unknown function DUF3025 CDA09_15545 0d6ed277c3644d6387d11b4ee59fc051 575 Pfam PF01855 Pyruvate flavodoxin/ferredoxin oxidoreductase, thiamine diP-bdg 212 446 2.8E-50 T 01-11-2018 IPR002880 Pyruvate flavodoxin/ferredoxin oxidoreductase, N-terminal GO:0016491|GO:0055114 CDA09_15545 0d6ed277c3644d6387d11b4ee59fc051 575 SUPERFAMILY SSF52922 464 573 3.01E-20 T 01-11-2018 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II GO:0003824 CDA09_15545 0d6ed277c3644d6387d11b4ee59fc051 575 SUPERFAMILY SSF52518 199 454 8.63E-55 T 01-11-2018 IPR029061 Thiamin diphosphate-binding fold CDA09_15545 0d6ed277c3644d6387d11b4ee59fc051 575 SUPERFAMILY SSF53323 5 223 2.75E-26 T 01-11-2018 IPR002869 Pyruvate-flavodoxin oxidoreductase, central domain GO:0016491|GO:0055114 CDA09_15545 0d6ed277c3644d6387d11b4ee59fc051 575 Gene3D G3DSA:3.40.50.920 461 574 5.6E-22 T 01-11-2018 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II GO:0003824 CDA09_15545 0d6ed277c3644d6387d11b4ee59fc051 575 Pfam PF01558 Pyruvate ferredoxin/flavodoxin oxidoreductase 14 179 2.8E-23 T 01-11-2018 IPR019752 Pyruvate/ketoisovalerate oxidoreductase, catalytic domain GO:0016903|GO:0055114 CDA09_15545 0d6ed277c3644d6387d11b4ee59fc051 575 TIGRFAM TIGR03710 OAFO_sf: 2-oxoacid:acceptor oxidoreductase, alpha subunit 6 570 2.6E-167 T 01-11-2018 IPR022367 2-oxoacid:acceptor oxidoreductase, alpha subunit KEGG: 00020+1.2.7.3|KEGG: 00720+1.2.7.3|MetaCyc: PWY-5392|MetaCyc: PWY-6969 CDA09_15545 0d6ed277c3644d6387d11b4ee59fc051 575 Gene3D G3DSA:3.40.50.970 188 385 6.0E-59 T 01-11-2018 CDA09_15545 0d6ed277c3644d6387d11b4ee59fc051 575 Pfam PF17147 Pyruvate:ferredoxin oxidoreductase core domain II 472 539 1.1E-6 T 01-11-2018 IPR033412 Pyruvate:ferredoxin oxidoreductase, core domain II CDA09_15545 0d6ed277c3644d6387d11b4ee59fc051 575 Gene3D G3DSA:3.40.920.10 2 183 3.8E-22 T 01-11-2018 IPR002869 Pyruvate-flavodoxin oxidoreductase, central domain GO:0016491|GO:0055114 CDA09_05310 b61b83b9bb13eecd8137768136b986a9 364 SUPERFAMILY SSF53597 149 358 6.87E-57 T 01-11-2018 IPR024072 Dihydrofolate reductase-like domain superfamily Reactome: R-HSA-196757 CDA09_05310 b61b83b9bb13eecd8137768136b986a9 364 Pfam PF01872 RibD C-terminal domain 151 355 3.9E-46 T 01-11-2018 IPR002734 Bacterial bifunctional deaminase-reductase, C-terminal GO:0008703|GO:0009231|GO:0055114 CDA09_05310 b61b83b9bb13eecd8137768136b986a9 364 ProSitePatterns PS00903 Cytidine and deoxycytidylate deaminases zinc-binding region signature. 54 92 - T 01-11-2018 IPR016192 APOBEC/CMP deaminase, zinc-binding GO:0008270|GO:0016787 CDA09_05310 b61b83b9bb13eecd8137768136b986a9 364 Gene3D G3DSA:3.40.140.10 2 139 1.0E-44 T 01-11-2018 CDA09_05310 b61b83b9bb13eecd8137768136b986a9 364 Gene3D G3DSA:3.40.430.10 140 361 1.6E-68 T 01-11-2018 IPR024072 Dihydrofolate reductase-like domain superfamily Reactome: R-HSA-196757 CDA09_05310 b61b83b9bb13eecd8137768136b986a9 364 SUPERFAMILY SSF53927 7 148 4.33E-46 T 01-11-2018 IPR016193 Cytidine deaminase-like GO:0003824 CDA09_05310 b61b83b9bb13eecd8137768136b986a9 364 PIRSF PIRSF006769 3 362 1.1E-124 T 01-11-2018 IPR004794 Riboflavin biosynthesis protein RibD GO:0008835|GO:0009231|GO:0055114 KEGG: 00740+3.5.4.26+1.1.1.193|MetaCyc: PWY-7991 CDA09_05310 b61b83b9bb13eecd8137768136b986a9 364 TIGRFAM TIGR00326 eubact_ribD: riboflavin biosynthesis protein RibD 11 357 2.2E-115 T 01-11-2018 IPR004794 Riboflavin biosynthesis protein RibD GO:0008835|GO:0009231|GO:0055114 KEGG: 00740+3.5.4.26+1.1.1.193|MetaCyc: PWY-7991 CDA09_05310 b61b83b9bb13eecd8137768136b986a9 364 TIGRFAM TIGR00227 ribD_Cterm: riboflavin-specific deaminase C-terminal domain 150 360 1.1E-55 T 01-11-2018 IPR011549 Riboflavin-specific deaminase, C-terminal GO:0008703|GO:0009231|GO:0050661|GO:0055114 CDA09_05310 b61b83b9bb13eecd8137768136b986a9 364 Pfam PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region 6 103 1.0E-18 T 01-11-2018 IPR002125 Cytidine and deoxycytidylate deaminase domain CDA09_01805 aee29bd86163c51f71f180db736fed5c 362 SUPERFAMILY SSF55821 4 204 4.58E-86 T 01-11-2018 IPR017945 DHBP synthase RibB-like alpha/beta domain superfamily CDA09_01805 aee29bd86163c51f71f180db736fed5c 362 SUPERFAMILY SSF142695 205 360 2.09E-40 T 01-11-2018 IPR036144 RibA-like superfamily KEGG: 00740+3.5.4.25|KEGG: 00790+3.5.4.25|MetaCyc: PWY-6168|MetaCyc: PWY-7539|MetaCyc: PWY-7991 CDA09_01805 aee29bd86163c51f71f180db736fed5c 362 TIGRFAM TIGR00506 ribB: 3,4-dihydroxy-2-butanone-4-phosphate synthase 5 200 6.0E-74 T 01-11-2018 IPR000422 3,4-dihydroxy-2-butanone 4-phosphate synthase, RibB GO:0008686|GO:0009231 KEGG: 00740+4.1.99.12|MetaCyc: PWY-6167|MetaCyc: PWY-6168 CDA09_01805 aee29bd86163c51f71f180db736fed5c 362 PIRSF PIRSF001259 2 361 1.9E-110 T 01-11-2018 CDA09_01805 aee29bd86163c51f71f180db736fed5c 362 Pfam PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase 9 199 1.8E-83 T 01-11-2018 IPR000422 3,4-dihydroxy-2-butanone 4-phosphate synthase, RibB GO:0008686|GO:0009231 KEGG: 00740+4.1.99.12|MetaCyc: PWY-6167|MetaCyc: PWY-6168 CDA09_01805 aee29bd86163c51f71f180db736fed5c 362 Hamap MF_00180 3,4-dihydroxy-2-butanone 4-phosphate synthase [ribB]. 2 204 38.2 T 01-11-2018 IPR000422 3,4-dihydroxy-2-butanone 4-phosphate synthase, RibB GO:0008686|GO:0009231 KEGG: 00740+4.1.99.12|MetaCyc: PWY-6167|MetaCyc: PWY-6168 CDA09_01805 aee29bd86163c51f71f180db736fed5c 362 Gene3D G3DSA:3.90.870.10 1 207 5.5E-88 T 01-11-2018 CDA09_01805 aee29bd86163c51f71f180db736fed5c 362 Gene3D G3DSA:3.40.50.10990 208 360 1.6E-20 T 01-11-2018 IPR036144 RibA-like superfamily KEGG: 00740+3.5.4.25|KEGG: 00790+3.5.4.25|MetaCyc: PWY-6168|MetaCyc: PWY-7539|MetaCyc: PWY-7991 CDA09_01805 aee29bd86163c51f71f180db736fed5c 362 Pfam PF00925 GTP cyclohydrolase II 209 359 3.9E-29 T 01-11-2018 IPR032677 GTP cyclohydrolase II KEGG: 00740+3.5.4.25|KEGG: 00790+3.5.4.25|MetaCyc: PWY-6168|MetaCyc: PWY-7539|MetaCyc: PWY-7991 CDA09_01555 7d959d31b4590e0524d41894e2ee239d 401 Gene3D G3DSA:3.40.640.10 2 224 1.3E-59 T 01-11-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 CDA09_01555 7d959d31b4590e0524d41894e2ee239d 401 PIRSF PIRSF000390 12 400 1.9E-54 T 01-11-2018 IPR000653 DegT/DnrJ/EryC1/StrS aminotransferase CDA09_01555 7d959d31b4590e0524d41894e2ee239d 401 SUPERFAMILY SSF53383 27 393 9.96E-59 T 01-11-2018 IPR015424 Pyridoxal phosphate-dependent transferase CDA09_01555 7d959d31b4590e0524d41894e2ee239d 401 Pfam PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family 31 390 1.9E-56 T 01-11-2018 IPR000653 DegT/DnrJ/EryC1/StrS aminotransferase CDA09_01555 7d959d31b4590e0524d41894e2ee239d 401 Gene3D G3DSA:3.90.1150.10 269 401 3.5E-9 T 01-11-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 CDA09_10785 a57b6e323369d7bf88574703c7b7fb0b 284 TIGRFAM TIGR00974 3a0107s02c: phosphate ABC transporter, permease protein PstA 21 276 1.2E-62 T 01-11-2018 IPR005672 Phosphate transport system permease protein PstA GO:0005315|GO:0005887|GO:0035435 CDA09_10785 a57b6e323369d7bf88574703c7b7fb0b 284 Gene3D G3DSA:1.10.3720.10 60 280 7.2E-28 T 01-11-2018 IPR035906 MetI-like superfamily CDA09_10785 a57b6e323369d7bf88574703c7b7fb0b 284 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 84 269 3.5E-21 T 01-11-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 CDA09_10785 a57b6e323369d7bf88574703c7b7fb0b 284 SUPERFAMILY SSF161098 23 268 8.32E-31 T 01-11-2018 IPR035906 MetI-like superfamily CDA09_22730 e658d975f9ad3c39a64d6d4deb16898f 300 SMART SM00530 32 87 4.3E-11 T 01-11-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 CDA09_22730 e658d975f9ad3c39a64d6d4deb16898f 300 Pfam PF01202 Shikimate kinase 141 293 5.6E-39 T 01-11-2018 IPR031322 Shikimate kinase/gluconokinase KEGG: 00400+2.7.1.71|MetaCyc: PWY-6163 CDA09_22730 e658d975f9ad3c39a64d6d4deb16898f 300 Pfam PF01381 Helix-turn-helix 33 87 2.1E-11 T 01-11-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 CDA09_22730 e658d975f9ad3c39a64d6d4deb16898f 300 Gene3D G3DSA:1.10.260.40 9 96 2.9E-17 T 01-11-2018 CDA09_22730 e658d975f9ad3c39a64d6d4deb16898f 300 Hamap MF_00109 Shikimate kinase [aroK]. 132 299 22.827 T 01-11-2018 IPR000623 Shikimate kinase/Threonine synthase-like 1 KEGG: 00400+2.7.1.71|MetaCyc: PWY-6163 CDA09_22730 e658d975f9ad3c39a64d6d4deb16898f 300 Gene3D G3DSA:3.40.50.300 124 298 7.2E-44 T 01-11-2018 CDA09_22730 e658d975f9ad3c39a64d6d4deb16898f 300 ProSitePatterns PS01128 Shikimate kinase signature. 188 214 - T 01-11-2018 IPR023000 Shikimate kinase, conserved site KEGG: 00400+2.7.1.71|MetaCyc: PWY-6163 CDA09_22730 e658d975f9ad3c39a64d6d4deb16898f 300 SUPERFAMILY SSF47413 24 93 6.17E-16 T 01-11-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 CDA09_22730 e658d975f9ad3c39a64d6d4deb16898f 300 SUPERFAMILY SSF52540 133 293 3.58E-23 T 01-11-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CDA09_22730 e658d975f9ad3c39a64d6d4deb16898f 300 PRINTS PR01100 Shikimate kinase family signature 159 172 1.1E-14 T 01-11-2018 CDA09_22730 e658d975f9ad3c39a64d6d4deb16898f 300 PRINTS PR01100 Shikimate kinase family signature 187 195 1.1E-14 T 01-11-2018 CDA09_22730 e658d975f9ad3c39a64d6d4deb16898f 300 PRINTS PR01100 Shikimate kinase family signature 206 215 1.1E-14 T 01-11-2018 CDA09_22730 e658d975f9ad3c39a64d6d4deb16898f 300 PRINTS PR01100 Shikimate kinase family signature 135 150 1.1E-14 T 01-11-2018 CDA09_07185 fd8ddb09030dfbe557d59bfb8ee86960 54 ProSitePatterns PS00202 Rubredoxin signature. 33 43 - T 01-11-2018 IPR018527 Rubredoxin, iron-binding site GO:0046872 CDA09_07185 fd8ddb09030dfbe557d59bfb8ee86960 54 Pfam PF00301 Rubredoxin 4 49 1.9E-24 T 01-11-2018 IPR024935 Rubredoxin domain GO:0005506 CDA09_07185 fd8ddb09030dfbe557d59bfb8ee86960 54 PRINTS PR00163 Rubredoxin signature 3 19 1.7E-9 T 01-11-2018 IPR024935 Rubredoxin domain GO:0005506 CDA09_07185 fd8ddb09030dfbe557d59bfb8ee86960 54 PRINTS PR00163 Rubredoxin signature 33 49 1.7E-9 T 01-11-2018 IPR024935 Rubredoxin domain GO:0005506 CDA09_07185 fd8ddb09030dfbe557d59bfb8ee86960 54 SUPERFAMILY SSF57802 1 52 3.2E-23 T 01-11-2018 CDA09_07185 fd8ddb09030dfbe557d59bfb8ee86960 54 Gene3D G3DSA:2.20.28.10 1 54 3.1E-29 T 01-11-2018 CDA09_07185 fd8ddb09030dfbe557d59bfb8ee86960 54 PIRSF PIRSF000071 1 54 1.0E-26 T 01-11-2018 IPR024922 Rubredoxin GO:0005506|GO:0009055 CDA09_18825 29f9b162108e726b459eae2f2eaacc0c 239 Gene3D G3DSA:3.10.620.30 41 239 9.1E-73 T 01-11-2018 CDA09_18825 29f9b162108e726b459eae2f2eaacc0c 239 Pfam PF06035 Bacterial transglutaminase-like cysteine proteinase BTLCP 80 191 1.2E-12 T 01-11-2018 IPR010319 Transglutaminase-like cysteine peptidase, predicted CDA09_18825 29f9b162108e726b459eae2f2eaacc0c 239 SUPERFAMILY SSF54001 57 145 2.94E-8 T 01-11-2018 IPR038765 Papain-like cysteine peptidase superfamily CDA09_20565 a10502078358df863c398061765749e4 375 Pfam PF00150 Cellulase (glycosyl hydrolase family 5) 51 344 1.1E-17 T 01-11-2018 IPR001547 Glycoside hydrolase, family 5 GO:0004553|GO:0005975 CDA09_20565 a10502078358df863c398061765749e4 375 Gene3D G3DSA:3.20.20.80 2 370 9.0E-102 T 01-11-2018 CDA09_20565 a10502078358df863c398061765749e4 375 SUPERFAMILY SSF51445 4 365 1.12E-94 T 01-11-2018 IPR017853 Glycoside hydrolase superfamily CDA09_09050 a05c3d7098c31ebb20748725938cbdc0 247 SUPERFAMILY SSF51735 2 245 6.28E-52 T 01-11-2018 IPR036291 NAD(P)-binding domain superfamily CDA09_09050 a05c3d7098c31ebb20748725938cbdc0 247 Gene3D G3DSA:3.40.50.720 1 246 1.2E-49 T 01-11-2018 CDA09_09050 a05c3d7098c31ebb20748725938cbdc0 247 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 120 136 1.1E-12 T 01-11-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CDA09_09050 a05c3d7098c31ebb20748725938cbdc0 247 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 146 165 1.1E-12 T 01-11-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CDA09_09050 a05c3d7098c31ebb20748725938cbdc0 247 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 208 228 1.1E-12 T 01-11-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CDA09_09050 a05c3d7098c31ebb20748725938cbdc0 247 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 167 184 1.1E-12 T 01-11-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CDA09_09050 a05c3d7098c31ebb20748725938cbdc0 247 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 71 82 1.1E-12 T 01-11-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CDA09_09050 a05c3d7098c31ebb20748725938cbdc0 247 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 4 245 3.9E-38 T 01-11-2018 CDA09_22235 c86bc0a9dea8cb38743a11d859b3ef39 213 Gene3D G3DSA:1.10.4060.10 125 211 1.9E-15 T 01-11-2018 CDA09_22235 c86bc0a9dea8cb38743a11d859b3ef39 213 Gene3D G3DSA:2.30.130.40 15 123 2.0E-33 T 01-11-2018 CDA09_22235 c86bc0a9dea8cb38743a11d859b3ef39 213 SUPERFAMILY SSF88697 16 200 1.49E-44 T 01-11-2018 IPR015947 PUA-like superfamily CDA09_22235 c86bc0a9dea8cb38743a11d859b3ef39 213 SMART SM00464 15 201 1.7E-8 T 01-11-2018 IPR003111 Lon, substrate-binding domain CDA09_22235 c86bc0a9dea8cb38743a11d859b3ef39 213 Pfam PF02190 ATP-dependent protease La (LON) substrate-binding domain 16 201 5.1E-19 T 01-11-2018 IPR003111 Lon, substrate-binding domain CDA09_12510 df3e72e00434ddf3ee522dd37b409fbc 127 Pfam PF01243 Pyridoxamine 5'-phosphate oxidase 7 99 9.4E-8 T 01-11-2018 IPR011576 Pyridoxamine 5'-phosphate oxidase, putative KEGG: 00750+1.4.3.5|MetaCyc: PWY-7204|MetaCyc: PWY-7282|Reactome: R-HSA-964975 CDA09_12510 df3e72e00434ddf3ee522dd37b409fbc 127 Gene3D G3DSA:2.30.110.10 3 127 1.7E-39 T 01-11-2018 IPR012349 FMN-binding split barrel GO:0048037 CDA09_12510 df3e72e00434ddf3ee522dd37b409fbc 127 SUPERFAMILY SSF50475 5 126 1.67E-26 T 01-11-2018 CDA09_12425 8e2720a18074524a3f5439f26f4bd0fa 429 Pfam PF00113 Enolase, C-terminal TIM barrel domain 141 423 3.9E-129 T 01-11-2018 IPR020810 Enolase, C-terminal TIM barrel domain KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 CDA09_12425 8e2720a18074524a3f5439f26f4bd0fa 429 SUPERFAMILY SSF54826 3 136 4.71E-56 T 01-11-2018 CDA09_12425 8e2720a18074524a3f5439f26f4bd0fa 429 Pfam PF03952 Enolase, N-terminal domain 4 133 6.4E-60 T 01-11-2018 IPR020811 Enolase, N-terminal KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 CDA09_12425 8e2720a18074524a3f5439f26f4bd0fa 429 PIRSF PIRSF001400 1 425 1.6E-189 T 01-11-2018 IPR000941 Enolase GO:0000015|GO:0000287|GO:0004634|GO:0006096 KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 CDA09_12425 8e2720a18074524a3f5439f26f4bd0fa 429 Hamap MF_00318 Enolase [eno]. 2 411 44.486 T 01-11-2018 IPR000941 Enolase GO:0000015|GO:0000287|GO:0004634|GO:0006096 KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 CDA09_12425 8e2720a18074524a3f5439f26f4bd0fa 429 Gene3D G3DSA:3.30.390.10 1 127 8.3E-57 T 01-11-2018 IPR029017 Enolase-like, N-terminal CDA09_12425 8e2720a18074524a3f5439f26f4bd0fa 429 SUPERFAMILY SSF51604 139 426 2.55E-125 T 01-11-2018 IPR036849 Enolase-like, C-terminal domain superfamily CDA09_12425 8e2720a18074524a3f5439f26f4bd0fa 429 SMART SM01192 139 425 2.6E-215 T 01-11-2018 IPR020810 Enolase, C-terminal TIM barrel domain KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 CDA09_12425 8e2720a18074524a3f5439f26f4bd0fa 429 TIGRFAM TIGR01060 eno: phosphopyruvate hydratase 4 425 1.2E-204 T 01-11-2018 IPR000941 Enolase GO:0000015|GO:0000287|GO:0004634|GO:0006096 KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 CDA09_12425 8e2720a18074524a3f5439f26f4bd0fa 429 SMART SM01193 4 134 1.8E-95 T 01-11-2018 IPR020811 Enolase, N-terminal KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 CDA09_12425 8e2720a18074524a3f5439f26f4bd0fa 429 ProSitePatterns PS00164 Enolase signature. 334 347 - T 01-11-2018 IPR020809 Enolase, conserved site KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218|Reactome: R-HSA-70171|Reactome: R-HSA-70263 CDA09_12425 8e2720a18074524a3f5439f26f4bd0fa 429 Gene3D G3DSA:3.20.20.120 128 429 2.2E-131 T 01-11-2018 IPR036849 Enolase-like, C-terminal domain superfamily CDA09_12425 8e2720a18074524a3f5439f26f4bd0fa 429 PRINTS PR00148 Enolase signature 161 174 4.5E-43 T 01-11-2018 IPR000941 Enolase GO:0000015|GO:0000287|GO:0004634|GO:0006096 KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 CDA09_12425 8e2720a18074524a3f5439f26f4bd0fa 429 PRINTS PR00148 Enolase signature 311 322 4.5E-43 T 01-11-2018 IPR000941 Enolase GO:0000015|GO:0000287|GO:0004634|GO:0006096 KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 CDA09_12425 8e2720a18074524a3f5439f26f4bd0fa 429 PRINTS PR00148 Enolase signature 334 348 4.5E-43 T 01-11-2018 IPR000941 Enolase GO:0000015|GO:0000287|GO:0004634|GO:0006096 KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 CDA09_12425 8e2720a18074524a3f5439f26f4bd0fa 429 PRINTS PR00148 Enolase signature 107 123 4.5E-43 T 01-11-2018 IPR000941 Enolase GO:0000015|GO:0000287|GO:0004634|GO:0006096 KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 CDA09_12425 8e2720a18074524a3f5439f26f4bd0fa 429 PRINTS PR00148 Enolase signature 37 51 4.5E-43 T 01-11-2018 IPR000941 Enolase GO:0000015|GO:0000287|GO:0004634|GO:0006096 KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 CDA09_12425 8e2720a18074524a3f5439f26f4bd0fa 429 PRINTS PR00148 Enolase signature 363 380 4.5E-43 T 01-11-2018 IPR000941 Enolase GO:0000015|GO:0000287|GO:0004634|GO:0006096 KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 CDA09_18215 0b61888788bc95fa53ba40b0286838a3 584 Pfam PF00905 Penicillin binding protein transpeptidase domain 254 550 3.2E-73 T 01-11-2018 IPR001460 Penicillin-binding protein, transpeptidase GO:0008658 CDA09_18215 0b61888788bc95fa53ba40b0286838a3 584 Pfam PF03717 Penicillin-binding Protein dimerisation domain 67 214 4.4E-21 T 01-11-2018 IPR005311 Penicillin-binding protein, dimerisation domain GO:0008658 CDA09_18215 0b61888788bc95fa53ba40b0286838a3 584 Gene3D G3DSA:3.30.450.330 230 555 1.7E-111 T 01-11-2018 CDA09_18215 0b61888788bc95fa53ba40b0286838a3 584 Hamap MF_02080 Peptidoglycan D,D-transpeptidase FtsI [ftsI]. 19 566 43.333 T 01-11-2018 IPR037532 Peptidoglycan D,D-transpeptidase FtsI GO:0005887|GO:0008658|GO:0008955|GO:0009252|GO:0051301 KEGG: 00550+3.4.16.4|MetaCyc: PWY-5265|MetaCyc: PWY-6471 CDA09_18215 0b61888788bc95fa53ba40b0286838a3 584 SUPERFAMILY SSF56519 63 228 3.4E-45 T 01-11-2018 IPR036138 Penicillin-binding protein, dimerisation domain superfamily GO:0008658 CDA09_18215 0b61888788bc95fa53ba40b0286838a3 584 SUPERFAMILY SSF56601 181 564 1.06E-90 T 01-11-2018 IPR012338 Beta-lactamase/transpeptidase-like CDA09_18215 0b61888788bc95fa53ba40b0286838a3 584 Gene3D G3DSA:3.40.710.10 290 473 1.7E-111 T 01-11-2018 CDA09_18215 0b61888788bc95fa53ba40b0286838a3 584 Gene3D G3DSA:3.90.1310.30 60 229 1.2E-46 T 01-11-2018 CDA09_07220 5cd631f4ea1940153fa8de4d21fc8e96 313 Gene3D G3DSA:3.40.50.300 9 237 1.5E-66 T 01-11-2018 CDA09_07220 5cd631f4ea1940153fa8de4d21fc8e96 313 SUPERFAMILY SSF52540 12 240 3.02E-62 T 01-11-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CDA09_07220 5cd631f4ea1940153fa8de4d21fc8e96 313 ProSitePatterns PS00211 ABC transporters family signature. 144 158 - T 01-11-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 CDA09_07220 5cd631f4ea1940153fa8de4d21fc8e96 313 SMART SM00382 40 220 4.8E-15 T 01-11-2018 IPR003593 AAA+ ATPase domain CDA09_07220 5cd631f4ea1940153fa8de4d21fc8e96 313 Pfam PF00005 ABC transporter 32 171 2.0E-30 T 01-11-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 CDA09_00620 0890bcf25ae986a72f46612640df3870 315 Pfam PF16881 N-terminal domain of lipoyl synthase of Radical_SAM family 24 67 3.5E-9 T 01-11-2018 IPR031691 Lipoyl synthase, N-terminal KEGG: 00785+2.8.1.8|MetaCyc: PWY-6987|MetaCyc: PWY-7382|Reactome: R-HSA-389661 CDA09_00620 0890bcf25ae986a72f46612640df3870 315 TIGRFAM TIGR00510 lipA: lipoyl synthase 25 308 1.2E-129 T 01-11-2018 IPR003698 Lipoyl synthase GO:0009107|GO:0016992|GO:0051539 KEGG: 00785+2.8.1.8|MetaCyc: PWY-6987|MetaCyc: PWY-7382|Reactome: R-HSA-389661 CDA09_00620 0890bcf25ae986a72f46612640df3870 315 SMART SM00729 78 283 5.1E-12 T 01-11-2018 IPR006638 Elp3/MiaB/NifB GO:0003824|GO:0051536 CDA09_00620 0890bcf25ae986a72f46612640df3870 315 Pfam PF04055 Radical SAM superfamily 85 245 7.0E-15 T 01-11-2018 IPR007197 Radical SAM GO:0003824|GO:0051536 CDA09_00620 0890bcf25ae986a72f46612640df3870 315 Gene3D G3DSA:3.20.20.70 42 288 6.1E-21 T 01-11-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 CDA09_00620 0890bcf25ae986a72f46612640df3870 315 PIRSF PIRSF005963 1 314 5.8E-129 T 01-11-2018 IPR003698 Lipoyl synthase GO:0009107|GO:0016992|GO:0051539 KEGG: 00785+2.8.1.8|MetaCyc: PWY-6987|MetaCyc: PWY-7382|Reactome: R-HSA-389661 CDA09_00620 0890bcf25ae986a72f46612640df3870 315 Hamap MF_00206 Lipoyl synthase [lipA]. 1 315 155.491 T 01-11-2018 IPR003698 Lipoyl synthase GO:0009107|GO:0016992|GO:0051539 KEGG: 00785+2.8.1.8|MetaCyc: PWY-6987|MetaCyc: PWY-7382|Reactome: R-HSA-389661 CDA09_00620 0890bcf25ae986a72f46612640df3870 315 SUPERFAMILY SSF102114 44 310 3.14E-70 T 01-11-2018 CDA09_11635 c7ad8d7174e8b9d9eb9990d873c90455 339 ProSitePatterns PS00211 ABC transporters family signature. 134 148 - T 01-11-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 CDA09_11635 c7ad8d7174e8b9d9eb9990d873c90455 339 Gene3D G3DSA:3.40.50.300 4 221 8.3E-65 T 01-11-2018 CDA09_11635 c7ad8d7174e8b9d9eb9990d873c90455 339 Gene3D G3DSA:2.40.50.940 222 249 5.9E-9 T 01-11-2018 CDA09_11635 c7ad8d7174e8b9d9eb9990d873c90455 339 Pfam PF00005 ABC transporter 20 161 1.3E-32 T 01-11-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 CDA09_11635 c7ad8d7174e8b9d9eb9990d873c90455 339 SMART SM00382 28 211 3.8E-15 T 01-11-2018 IPR003593 AAA+ ATPase domain CDA09_11635 c7ad8d7174e8b9d9eb9990d873c90455 339 SUPERFAMILY SSF52540 4 243 9.78E-85 T 01-11-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CDA09_11635 c7ad8d7174e8b9d9eb9990d873c90455 339 SUPERFAMILY SSF50331 236 338 8.22E-11 T 01-11-2018 IPR008995 Molybdate/tungstate binding, C-terminal CDA09_18330 ce28bde56491ebae1bbee726d483a6d8 252 Pfam PF13444 Acetyltransferase (GNAT) domain 33 133 7.6E-35 T 01-11-2018 CDA09_18330 ce28bde56491ebae1bbee726d483a6d8 252 SUPERFAMILY SSF55729 19 223 5.72E-44 T 01-11-2018 IPR016181 Acyl-CoA N-acyltransferase CDA09_18330 ce28bde56491ebae1bbee726d483a6d8 252 Gene3D G3DSA:3.40.630.30 21 173 1.1E-27 T 01-11-2018 CDA09_15320 418672493ff20ab44aa4bd439d348b62 239 Gene3D G3DSA:3.40.1010.10 5 124 4.2E-39 T 01-11-2018 IPR014777 Tetrapyrrole methylase, subdomain 1 GO:0008168 Reactome: R-HSA-5358493 CDA09_15320 418672493ff20ab44aa4bd439d348b62 239 Gene3D G3DSA:3.30.950.10 125 239 7.5E-46 T 01-11-2018 IPR014776 Tetrapyrrole methylase, subdomain 2 GO:0008168 Reactome: R-HSA-5358493 CDA09_15320 418672493ff20ab44aa4bd439d348b62 239 Pfam PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases 65 211 2.5E-9 T 01-11-2018 IPR000878 Tetrapyrrole methylase GO:0008168 Reactome: R-HSA-5358493 CDA09_15320 418672493ff20ab44aa4bd439d348b62 239 SUPERFAMILY SSF53790 6 237 1.02E-62 T 01-11-2018 IPR035996 Tetrapyrrole methylase superfamily GO:0008168 Reactome: R-HSA-5358493 CDA09_15320 418672493ff20ab44aa4bd439d348b62 239 PIRSF PIRSF005917 1 238 1.3E-51 T 01-11-2018 IPR008189 rRNA small subunit methyltransferase I GO:0008168 CDA09_12895 32a07ba8c378706046b65d7e3652e2c7 298 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 76 273 2.7E-16 T 01-11-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 CDA09_12895 32a07ba8c378706046b65d7e3652e2c7 298 Gene3D G3DSA:1.10.3720.10 14 275 1.6E-64 T 01-11-2018 IPR035906 MetI-like superfamily CDA09_12895 32a07ba8c378706046b65d7e3652e2c7 298 TIGRFAM TIGR00969 3a0106s02: sulfate ABC transporter, permease protein 12 270 1.6E-98 T 01-11-2018 IPR005667 Sulphate ABC transporter permease protein 2 GO:0008272|GO:0015419|GO:0016020 CDA09_12895 32a07ba8c378706046b65d7e3652e2c7 298 TIGRFAM TIGR02140 permease_CysW: sulfate ABC transporter, permease protein CysW 13 272 1.1E-123 T 01-11-2018 IPR011866 Sulphate ABC transporter, permease protein CysW GO:0008272|GO:0015116|GO:0016021 CDA09_12895 32a07ba8c378706046b65d7e3652e2c7 298 SUPERFAMILY SSF161098 11 262 1.7E-55 T 01-11-2018 IPR035906 MetI-like superfamily CDA09_01865 6b7a55a9877751607bfa48ba355cabe9 255 Gene3D G3DSA:3.40.50.2300 1 126 4.5E-21 T 01-11-2018 CDA09_01865 6b7a55a9877751607bfa48ba355cabe9 255 Gene3D G3DSA:1.20.120.160 141 247 8.8E-7 T 01-11-2018 IPR036641 HPT domain superfamily GO:0000160 CDA09_01865 6b7a55a9877751607bfa48ba355cabe9 255 SMART SM00448 5 119 9.5E-14 T 01-11-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 CDA09_01865 6b7a55a9877751607bfa48ba355cabe9 255 SUPERFAMILY SSF52172 5 125 2.42E-21 T 01-11-2018 IPR011006 CheY-like superfamily CDA09_01865 6b7a55a9877751607bfa48ba355cabe9 255 SUPERFAMILY SSF47226 135 246 2.22E-10 T 01-11-2018 IPR036641 HPT domain superfamily GO:0000160 CDA09_01865 6b7a55a9877751607bfa48ba355cabe9 255 Pfam PF00072 Response regulator receiver domain 7 96 1.5E-14 T 01-11-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 CDA09_14390 d945009c29be6fb715201313ee2f5136 648 Gene3D G3DSA:3.30.70.270 485 647 5.1E-59 T 01-11-2018 CDA09_14390 d945009c29be6fb715201313ee2f5136 648 Gene3D G3DSA:3.30.450.20 359 484 7.5E-26 T 01-11-2018 CDA09_14390 d945009c29be6fb715201313ee2f5136 648 Pfam PF03924 CHASE domain 90 276 6.0E-54 T 01-11-2018 IPR006189 CHASE domain CDA09_14390 d945009c29be6fb715201313ee2f5136 648 SUPERFAMILY SSF55073 491 645 2.51E-51 T 01-11-2018 IPR029787 Nucleotide cyclase CDA09_14390 d945009c29be6fb715201313ee2f5136 648 ProDom PD332323 CIRCULATION DNA PROTEIN TAIL/DNA PHAGE PROPHAGE VIRION FLUMU BACTERIOPHAGE MU-LIKE 340 416 0.006 T 01-11-2018 IPR009826 DNA circulation, N-terminal CDA09_14390 d945009c29be6fb715201313ee2f5136 648 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 483 644 1.4E-44 T 01-11-2018 IPR000160 GGDEF domain CDA09_14390 d945009c29be6fb715201313ee2f5136 648 Pfam PF08448 PAS fold 372 477 4.2E-13 T 01-11-2018 IPR013656 PAS fold-4 CDA09_14390 d945009c29be6fb715201313ee2f5136 648 SMART SM01079 87 278 6.1E-67 T 01-11-2018 IPR006189 CHASE domain CDA09_14390 d945009c29be6fb715201313ee2f5136 648 Gene3D G3DSA:3.30.450.350 91 291 2.1E-35 T 01-11-2018 CDA09_14390 d945009c29be6fb715201313ee2f5136 648 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 358 481 9.0E-22 T 01-11-2018 IPR000014 PAS domain CDA09_14390 d945009c29be6fb715201313ee2f5136 648 SMART SM00086 433 475 8.0E-6 T 01-11-2018 IPR001610 PAC motif CDA09_14390 d945009c29be6fb715201313ee2f5136 648 SUPERFAMILY SSF55785 348 473 1.22E-23 T 01-11-2018 IPR035965 PAS domain superfamily CDA09_14390 d945009c29be6fb715201313ee2f5136 648 Pfam PF00990 Diguanylate cyclase, GGDEF domain 486 643 3.5E-46 T 01-11-2018 IPR000160 GGDEF domain CDA09_14390 d945009c29be6fb715201313ee2f5136 648 SMART SM00091 362 428 4.1E-8 T 01-11-2018 IPR000014 PAS domain CDA09_14390 d945009c29be6fb715201313ee2f5136 648 SMART SM00267 475 647 1.1E-59 T 01-11-2018 IPR000160 GGDEF domain CDA09_18290 0162743189bfdf785ee3eae6bb5a1e6f 148 PRINTS PR01071 Acetyl-CoA biotin carboxyl carrier protein signature 94 108 9.0E-15 T 01-11-2018 IPR001249 Acetyl-CoA biotin carboxyl carrier GO:0003989|GO:0006633|GO:0009317 CDA09_18290 0162743189bfdf785ee3eae6bb5a1e6f 148 PRINTS PR01071 Acetyl-CoA biotin carboxyl carrier protein signature 109 122 9.0E-15 T 01-11-2018 IPR001249 Acetyl-CoA biotin carboxyl carrier GO:0003989|GO:0006633|GO:0009317 CDA09_18290 0162743189bfdf785ee3eae6bb5a1e6f 148 PRINTS PR01071 Acetyl-CoA biotin carboxyl carrier protein signature 77 90 9.0E-15 T 01-11-2018 IPR001249 Acetyl-CoA biotin carboxyl carrier GO:0003989|GO:0006633|GO:0009317 CDA09_18290 0162743189bfdf785ee3eae6bb5a1e6f 148 ProSitePatterns PS00188 Biotin-requiring enzymes attachment site. 104 121 - T 01-11-2018 IPR001882 Biotin-binding site Reactome: R-HSA-196780|Reactome: R-HSA-3371599 CDA09_18290 0162743189bfdf785ee3eae6bb5a1e6f 148 Pfam PF00364 Biotin-requiring enzyme 74 147 8.4E-23 T 01-11-2018 IPR000089 Biotin/lipoyl attachment CDA09_18290 0162743189bfdf785ee3eae6bb5a1e6f 148 SUPERFAMILY SSF51230 73 147 4.71E-24 T 01-11-2018 IPR011053 Single hybrid motif CDA09_18290 0162743189bfdf785ee3eae6bb5a1e6f 148 Gene3D G3DSA:2.40.50.100 71 147 7.0E-30 T 01-11-2018 CDA09_18290 0162743189bfdf785ee3eae6bb5a1e6f 148 TIGRFAM TIGR00531 BCCP: acetyl-CoA carboxylase, biotin carboxyl carrier protein 1 147 2.7E-52 T 01-11-2018 IPR001249 Acetyl-CoA biotin carboxyl carrier GO:0003989|GO:0006633|GO:0009317 CDA09_15665 ae7d07ab097e3a9318353e301d13c145 713 Pfam PF06505 Activator of aromatic catabolism 7 107 7.4E-29 T 01-11-2018 IPR010523 Activator of aromatic catabolism CDA09_15665 ae7d07ab097e3a9318353e301d13c145 713 SMART SM00387 597 705 2.2E-27 T 01-11-2018 IPR003594 Histidine kinase/HSP90-like ATPase CDA09_15665 ae7d07ab097e3a9318353e301d13c145 713 SUPERFAMILY SSF55874 544 703 1.31E-37 T 01-11-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily CDA09_15665 ae7d07ab097e3a9318353e301d13c145 713 Gene3D G3DSA:3.30.1380.20 27 182 2.2E-9 T 01-11-2018 CDA09_15665 ae7d07ab097e3a9318353e301d13c145 713 Pfam PF00512 His Kinase A (phospho-acceptor) domain 480 554 1.3E-13 T 01-11-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 CDA09_15665 ae7d07ab097e3a9318353e301d13c145 713 SUPERFAMILY SSF111126 43 176 2.51E-13 T 01-11-2018 IPR024096 NO signalling/Golgi transport ligand-binding domain superfamily CDA09_15665 ae7d07ab097e3a9318353e301d13c145 713 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 599 704 1.7E-17 T 01-11-2018 IPR003594 Histidine kinase/HSP90-like ATPase CDA09_15665 ae7d07ab097e3a9318353e301d13c145 713 Pfam PF00989 PAS fold 224 333 9.7E-9 T 01-11-2018 IPR013767 PAS fold GO:0006355 CDA09_15665 ae7d07ab097e3a9318353e301d13c145 713 SUPERFAMILY SSF47384 466 553 7.06E-12 T 01-11-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 CDA09_15665 ae7d07ab097e3a9318353e301d13c145 713 SUPERFAMILY SSF55785 363 474 1.39E-20 T 01-11-2018 IPR035965 PAS domain superfamily CDA09_15665 ae7d07ab097e3a9318353e301d13c145 713 ProDom PD485437 REGULATOR TRANSCRIPTIONAL FIS-TYPE HELIX-TURN-HELIX ACTIVATOR PLASMID FAMILY PHENOL-DEGRADATIVE FIS SIGMA-54 1 135 8.0E-59 T 01-11-2018 IPR010523 Activator of aromatic catabolism CDA09_15665 ae7d07ab097e3a9318353e301d13c145 713 SMART SM00086 424 465 4.2 T 01-11-2018 IPR001610 PAC motif CDA09_15665 ae7d07ab097e3a9318353e301d13c145 713 SMART SM00086 295 336 6.9 T 01-11-2018 IPR001610 PAC motif CDA09_15665 ae7d07ab097e3a9318353e301d13c145 713 SMART SM00388 480 555 1.2E-10 T 01-11-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 CDA09_15665 ae7d07ab097e3a9318353e301d13c145 713 Pfam PF08448 PAS fold 361 467 1.3E-15 T 01-11-2018 IPR013656 PAS fold-4 CDA09_15665 ae7d07ab097e3a9318353e301d13c145 713 PRINTS PR00344 Bacterial sensor protein C-terminal signature 665 683 1.1E-13 T 01-11-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 CDA09_15665 ae7d07ab097e3a9318353e301d13c145 713 PRINTS PR00344 Bacterial sensor protein C-terminal signature 689 702 1.1E-13 T 01-11-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 CDA09_15665 ae7d07ab097e3a9318353e301d13c145 713 PRINTS PR00344 Bacterial sensor protein C-terminal signature 634 648 1.1E-13 T 01-11-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 CDA09_15665 ae7d07ab097e3a9318353e301d13c145 713 PRINTS PR00344 Bacterial sensor protein C-terminal signature 652 662 1.1E-13 T 01-11-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 CDA09_15665 ae7d07ab097e3a9318353e301d13c145 713 Gene3D G3DSA:3.30.450.20 212 334 8.0E-17 T 01-11-2018 CDA09_15665 ae7d07ab097e3a9318353e301d13c145 713 Gene3D G3DSA:1.10.287.130 476 554 4.5E-20 T 01-11-2018 CDA09_15665 ae7d07ab097e3a9318353e301d13c145 713 SUPERFAMILY SSF55785 213 334 1.41E-16 T 01-11-2018 IPR035965 PAS domain superfamily CDA09_15665 ae7d07ab097e3a9318353e301d13c145 713 SMART SM00989 118 180 3.8E-19 T 01-11-2018 IPR004096 4-vinyl reductase, 4VR CDA09_15665 ae7d07ab097e3a9318353e301d13c145 713 Gene3D G3DSA:3.30.450.20 351 475 4.9E-21 T 01-11-2018 CDA09_15665 ae7d07ab097e3a9318353e301d13c145 713 SMART SM00091 352 418 5.2E-10 T 01-11-2018 IPR000014 PAS domain CDA09_15665 ae7d07ab097e3a9318353e301d13c145 713 SMART SM00091 223 289 1.9E-5 T 01-11-2018 IPR000014 PAS domain CDA09_15665 ae7d07ab097e3a9318353e301d13c145 713 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 219 343 5.6E-14 T 01-11-2018 IPR000014 PAS domain CDA09_15665 ae7d07ab097e3a9318353e301d13c145 713 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 356 472 1.4E-14 T 01-11-2018 IPR000014 PAS domain CDA09_15665 ae7d07ab097e3a9318353e301d13c145 713 Pfam PF02830 V4R domain 119 174 5.4E-13 T 01-11-2018 IPR004096 4-vinyl reductase, 4VR CDA09_15665 ae7d07ab097e3a9318353e301d13c145 713 Gene3D G3DSA:3.30.565.10 557 709 1.9E-34 T 01-11-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily CDA09_10350 01e17a0de3e786e6513077d8c94e6283 315 Pfam PF03466 LysR substrate binding domain 87 292 3.5E-40 T 01-11-2018 IPR005119 LysR, substrate-binding CDA09_10350 01e17a0de3e786e6513077d8c94e6283 315 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 3 62 1.5E-24 T 01-11-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 CDA09_10350 01e17a0de3e786e6513077d8c94e6283 315 Gene3D G3DSA:3.40.190.10 91 288 9.1E-64 T 01-11-2018 CDA09_10350 01e17a0de3e786e6513077d8c94e6283 315 Gene3D G3DSA:1.10.10.10 1 90 1.2E-32 T 01-11-2018 IPR036388 Winged helix-like DNA-binding domain superfamily CDA09_10350 01e17a0de3e786e6513077d8c94e6283 315 Gene3D G3DSA:3.40.190.10 162 269 9.1E-64 T 01-11-2018 CDA09_10350 01e17a0de3e786e6513077d8c94e6283 315 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 18 29 3.1E-10 T 01-11-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 CDA09_10350 01e17a0de3e786e6513077d8c94e6283 315 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 29 39 3.1E-10 T 01-11-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 CDA09_10350 01e17a0de3e786e6513077d8c94e6283 315 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 39 50 3.1E-10 T 01-11-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 CDA09_10350 01e17a0de3e786e6513077d8c94e6283 315 SUPERFAMILY SSF46785 1 86 3.19E-26 T 01-11-2018 IPR036390 Winged helix DNA-binding domain superfamily CDA09_10350 01e17a0de3e786e6513077d8c94e6283 315 SUPERFAMILY SSF53850 91 295 5.74E-36 T 01-11-2018 CDA09_09290 b3765448631809abb54f82d165b1153f 224 Pfam PF00072 Response regulator receiver domain 5 116 6.6E-12 T 01-11-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 CDA09_09290 b3765448631809abb54f82d165b1153f 224 SUPERFAMILY SSF52172 3 168 1.71E-20 T 01-11-2018 IPR011006 CheY-like superfamily CDA09_09290 b3765448631809abb54f82d165b1153f 224 Gene3D G3DSA:3.40.50.2300 2 133 5.6E-18 T 01-11-2018 CDA09_09290 b3765448631809abb54f82d165b1153f 224 SMART SM00448 3 118 1.7E-8 T 01-11-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 CDA09_09290 b3765448631809abb54f82d165b1153f 224 Gene3D G3DSA:1.10.10.10 136 222 6.9E-8 T 01-11-2018 IPR036388 Winged helix-like DNA-binding domain superfamily CDA09_04610 8a77c491a60e76bbc99327df099bc5ce 677 SUPERFAMILY SSF48019 243 363 2.13E-27 T 01-11-2018 IPR008921 DNA polymerase III, clamp loader complex, gamma/delta/delta subunit, C-terminal GO:0003677|GO:0006260 Reactome: R-HSA-110312|Reactome: R-HSA-110314|Reactome: R-HSA-110320|Reactome: R-HSA-174411|Reactome: R-HSA-5651801|Reactome: R-HSA-5655862|Reactome: R-HSA-5656121|Reactome: R-HSA-5656169|Reactome: R-HSA-5685942|Reactome: R-HSA-5696397|Reactome: R-HSA-5696400|Reactome: R-HSA-6782135|Reactome: R-HSA-6782210|Reactome: R-HSA-69091 CDA09_04610 8a77c491a60e76bbc99327df099bc5ce 677 Pfam PF12169 DNA polymerase III subunits gamma and tau domain III 232 358 2.6E-23 T 01-11-2018 IPR022754 DNA polymerase III, gamma subunit, domain III GO:0003887 CDA09_04610 8a77c491a60e76bbc99327df099bc5ce 677 Pfam PF13177 DNA polymerase III, delta subunit 20 178 2.0E-40 T 01-11-2018 CDA09_04610 8a77c491a60e76bbc99327df099bc5ce 677 Gene3D G3DSA:3.40.50.300 13 177 2.7E-102 T 01-11-2018 CDA09_04610 8a77c491a60e76bbc99327df099bc5ce 677 SMART SM00382 37 179 7.9E-7 T 01-11-2018 IPR003593 AAA+ ATPase domain CDA09_04610 8a77c491a60e76bbc99327df099bc5ce 677 Gene3D G3DSA:1.10.8.60 8 240 2.7E-102 T 01-11-2018 CDA09_04610 8a77c491a60e76bbc99327df099bc5ce 677 Pfam PF12170 DNA polymerase III tau subunit V interacting with alpha 551 674 1.6E-10 T 01-11-2018 IPR021029 DNA polymerase III, tau subunit, domain V GO:0003887 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 CDA09_04610 8a77c491a60e76bbc99327df099bc5ce 677 SUPERFAMILY SSF52540 32 223 3.09E-54 T 01-11-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CDA09_04610 8a77c491a60e76bbc99327df099bc5ce 677 Gene3D G3DSA:3.30.300.150 537 659 3.2E-10 T 01-11-2018 IPR038249 DNA polymerase III, tau subunit, C-terminal domain superfamily KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 CDA09_04610 8a77c491a60e76bbc99327df099bc5ce 677 Gene3D G3DSA:1.20.272.10 242 360 1.3E-33 T 01-11-2018 CDA09_04610 8a77c491a60e76bbc99327df099bc5ce 677 TIGRFAM TIGR02397 dnaX_nterm: DNA polymerase III, subunit gamma and tau 3 354 2.0E-126 T 01-11-2018 IPR012763 DNA polymerase III, subunit gamma/ tau GO:0003887|GO:0005524|GO:0006260|GO:0009360 CDA09_04790 28f1637a1efabb1fa14c1a5d18cf5df3 440 Pfam PF13751 Transposase DDE domain 356 434 5.0E-17 T 01-11-2018 IPR025668 Transposase DDE domain CDA09_04790 28f1637a1efabb1fa14c1a5d18cf5df3 440 Pfam PF05598 Transposase domain (DUF772) 56 123 4.6E-13 T 01-11-2018 IPR008490 Transposase InsH, N-terminal CDA09_09250 573c465e12b9e710f81bc161d03813cb 318 Pfam PF01869 BadF/BadG/BcrA/BcrD ATPase family 7 255 1.4E-66 T 01-11-2018 IPR002731 ATPase, BadF/BadG/BcrA/BcrD type Reactome: R-HSA-446210 CDA09_09250 573c465e12b9e710f81bc161d03813cb 318 TIGRFAM TIGR00241 CoA_E_activ: putative CoA-substrate-specific enzyme activase 5 254 1.5E-78 T 01-11-2018 IPR008275 CoA enzyme activase CDA09_09250 573c465e12b9e710f81bc161d03813cb 318 Gene3D G3DSA:3.30.420.40 98 238 1.0E-78 T 01-11-2018 CDA09_09250 573c465e12b9e710f81bc161d03813cb 318 SUPERFAMILY SSF53067 4 257 6.83E-39 T 01-11-2018 CDA09_09250 573c465e12b9e710f81bc161d03813cb 318 Gene3D G3DSA:3.30.420.40 6 255 1.0E-78 T 01-11-2018 CDA09_02345 d926001f24ce7d5b6d22473b319ef7f8 243 Gene3D G3DSA:1.10.10.200 1 80 8.4E-37 T 01-11-2018 IPR017856 Integrase-like, N-terminal CDA09_02345 d926001f24ce7d5b6d22473b319ef7f8 243 SUPERFAMILY SSF75625 3 242 5.89E-97 T 01-11-2018 IPR029072 YebC-like Reactome: R-HSA-5628897|Reactome: R-HSA-611105 CDA09_02345 d926001f24ce7d5b6d22473b319ef7f8 243 TIGRFAM TIGR01033 TIGR01033: DNA-binding regulatory protein, YebC/PmpR family 1 236 1.2E-95 T 01-11-2018 IPR002876 Transcriptional regulator TACO1-like Reactome: R-HSA-5628897|Reactome: R-HSA-611105 CDA09_02345 d926001f24ce7d5b6d22473b319ef7f8 243 Gene3D G3DSA:3.30.70.980 85 235 9.5E-52 T 01-11-2018 IPR026564 Transcriptional regulator TACO1-like, domain 3 Reactome: R-HSA-5628897|Reactome: R-HSA-611105 CDA09_02345 d926001f24ce7d5b6d22473b319ef7f8 243 Gene3D G3DSA:3.30.70.980 130 205 9.5E-52 T 01-11-2018 IPR026564 Transcriptional regulator TACO1-like, domain 3 Reactome: R-HSA-5628897|Reactome: R-HSA-611105 CDA09_02345 d926001f24ce7d5b6d22473b319ef7f8 243 Hamap MF_00693 Probable transcriptional regulatory protein YebC [yebC]. 3 239 36.008 T 01-11-2018 IPR002876 Transcriptional regulator TACO1-like Reactome: R-HSA-5628897|Reactome: R-HSA-611105 CDA09_02345 d926001f24ce7d5b6d22473b319ef7f8 243 Pfam PF01709 Transcriptional regulator 5 236 4.9E-96 T 01-11-2018 IPR002876 Transcriptional regulator TACO1-like Reactome: R-HSA-5628897|Reactome: R-HSA-611105 CDA09_22750 6141b503e62bb44cf28c4ccc8d1e43aa 402 Gene3D G3DSA:3.40.47.10 142 398 5.8E-156 T 01-11-2018 IPR016039 Thiolase-like GO:0003824 CDA09_22750 6141b503e62bb44cf28c4ccc8d1e43aa 402 TIGRFAM TIGR02430 pcaF: 3-oxoadipyl-CoA thiolase 3 402 1.5E-230 T 01-11-2018 IPR012793 Beta-ketoadipyl CoA thiolase GO:0016747|GO:0019619 KEGG: 00360+2.3.1.174|KEGG: 00362+2.3.1.174|MetaCyc: PWY-1361|MetaCyc: PWY-2361|MetaCyc: PWY-6185 CDA09_22750 6141b503e62bb44cf28c4ccc8d1e43aa 402 SUPERFAMILY SSF53901 278 401 1.68E-43 T 01-11-2018 IPR016039 Thiolase-like GO:0003824 CDA09_22750 6141b503e62bb44cf28c4ccc8d1e43aa 402 Pfam PF02803 Thiolase, C-terminal domain 278 400 6.9E-42 T 01-11-2018 IPR020617 Thiolase, C-terminal GO:0016747 CDA09_22750 6141b503e62bb44cf28c4ccc8d1e43aa 402 ProSitePatterns PS00099 Thiolases active site. 383 396 - T 01-11-2018 IPR020610 Thiolase, active site GO:0016747 CDA09_22750 6141b503e62bb44cf28c4ccc8d1e43aa 402 TIGRFAM TIGR01930 AcCoA-C-Actrans: acetyl-CoA C-acyltransferase 7 400 1.2E-136 T 01-11-2018 IPR002155 Thiolase GO:0016747 CDA09_22750 6141b503e62bb44cf28c4ccc8d1e43aa 402 PIRSF PIRSF000429 1 402 3.9E-133 T 01-11-2018 IPR002155 Thiolase GO:0016747 CDA09_22750 6141b503e62bb44cf28c4ccc8d1e43aa 402 SUPERFAMILY SSF53901 5 277 1.35E-82 T 01-11-2018 IPR016039 Thiolase-like GO:0003824 CDA09_22750 6141b503e62bb44cf28c4ccc8d1e43aa 402 ProSitePatterns PS00098 Thiolases acyl-enzyme intermediate signature. 87 105 - T 01-11-2018 IPR020615 Thiolase, acyl-enzyme intermediate active site GO:0016747 CDA09_22750 6141b503e62bb44cf28c4ccc8d1e43aa 402 Pfam PF00108 Thiolase, N-terminal domain 6 270 1.1E-74 T 01-11-2018 IPR020616 Thiolase, N-terminal GO:0016747 CDA09_22750 6141b503e62bb44cf28c4ccc8d1e43aa 402 Gene3D G3DSA:3.40.47.10 7 283 5.8E-156 T 01-11-2018 IPR016039 Thiolase-like GO:0003824 CDA09_22750 6141b503e62bb44cf28c4ccc8d1e43aa 402 ProSitePatterns PS00737 Thiolases signature 2. 348 364 - T 01-11-2018 IPR020613 Thiolase, conserved site GO:0016747 CDA09_00785 8580528dcc865b2e60bd2c12fd0876b1 396 Gene3D G3DSA:3.40.50.300 4 209 2.0E-23 T 01-11-2018 CDA09_00785 8580528dcc865b2e60bd2c12fd0876b1 396 SUPERFAMILY SSF52540 27 251 6.14E-19 T 01-11-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CDA09_21375 1cac3ecb91079e388d707c8e9030ec6c 97 Gene3D G3DSA:1.10.260.40 12 91 4.5E-16 T 01-11-2018 CDA09_21375 1cac3ecb91079e388d707c8e9030ec6c 97 SUPERFAMILY SSF47413 23 90 5.35E-16 T 01-11-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 CDA09_21375 1cac3ecb91079e388d707c8e9030ec6c 97 SMART SM00530 28 83 6.4E-11 T 01-11-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 CDA09_21375 1cac3ecb91079e388d707c8e9030ec6c 97 Pfam PF01381 Helix-turn-helix 29 83 1.2E-10 T 01-11-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 CDA09_03435 814ed0003ed572610238b964449c9126 78 TIGRFAM TIGR00009 L28: ribosomal protein bL28 1 58 1.0E-28 T 01-11-2018 IPR001383 Ribosomal protein L28 GO:0003735|GO:0005622|GO:0005840|GO:0006412 CDA09_03435 814ed0003ed572610238b964449c9126 78 Pfam PF00830 Ribosomal L28 family 3 62 2.1E-29 T 01-11-2018 IPR026569 Ribosomal protein L28/L24 GO:0003735 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 CDA09_03435 814ed0003ed572610238b964449c9126 78 Hamap MF_00373 50S ribosomal protein L28 [rpmB]. 1 71 21.72 T 01-11-2018 IPR001383 Ribosomal protein L28 GO:0003735|GO:0005622|GO:0005840|GO:0006412 CDA09_03435 814ed0003ed572610238b964449c9126 78 Gene3D G3DSA:2.30.170.40 2 78 1.5E-33 T 01-11-2018 IPR037147 Ribosomal protein L28/L24 superfamily GO:0003735 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 CDA09_03435 814ed0003ed572610238b964449c9126 78 SUPERFAMILY SSF143800 2 77 8.04E-32 T 01-11-2018 IPR034704 L28p-like Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 CDA09_14705 a70324298022ae4f847c5970f44745ed 596 Pfam PF02770 Acyl-CoA dehydrogenase, middle domain 163 272 2.4E-15 T 01-11-2018 IPR006091 Acyl-CoA oxidase/dehydrogenase, central domain GO:0016627|GO:0055114 CDA09_14705 a70324298022ae4f847c5970f44745ed 596 Pfam PF12418 Acyl-CoA dehydrogenase N terminal 3 34 2.8E-12 T 01-11-2018 IPR020953 Acyl-CoA dehydrogenase, N-terminal, bacteria CDA09_14705 a70324298022ae4f847c5970f44745ed 596 Gene3D G3DSA:1.10.540.10 23 159 1.3E-15 T 01-11-2018 IPR037069 Acyl-CoA dehydrogenase/oxidase, N-terminal domain superfamily GO:0016627|GO:0050660|GO:0055114 CDA09_14705 a70324298022ae4f847c5970f44745ed 596 Gene3D G3DSA:2.40.110.10 161 289 4.5E-27 T 01-11-2018 CDA09_14705 a70324298022ae4f847c5970f44745ed 596 Gene3D G3DSA:1.20.140.10 290 456 2.6E-47 T 01-11-2018 CDA09_14705 a70324298022ae4f847c5970f44745ed 596 Pfam PF00441 Acyl-CoA dehydrogenase, C-terminal domain 285 450 9.5E-27 T 01-11-2018 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal GO:0016627|GO:0055114 CDA09_14705 a70324298022ae4f847c5970f44745ed 596 SUPERFAMILY SSF47203 283 459 4.83E-45 T 01-11-2018 IPR036250 Acyl-CoA dehydrogenase-like, C-terminal GO:0016627|GO:0055114 CDA09_14705 a70324298022ae4f847c5970f44745ed 596 Pfam PF12806 Acetyl-CoA dehydrogenase C-terminal like 466 591 2.2E-24 T 01-11-2018 IPR025878 Acetyl-CoA dehydrogenase-like C-terminal domain CDA09_14705 a70324298022ae4f847c5970f44745ed 596 Pfam PF02771 Acyl-CoA dehydrogenase, N-terminal domain 39 158 1.1E-10 T 01-11-2018 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal GO:0016627|GO:0050660|GO:0055114 CDA09_14705 a70324298022ae4f847c5970f44745ed 596 SUPERFAMILY SSF56645 38 283 1.31E-57 T 01-11-2018 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain superfamily GO:0016627|GO:0055114 CDA09_07315 c3a72be1af606acaab418951d89b3d8c 98 Pfam PF01329 Pterin 4 alpha carbinolamine dehydratase 4 93 1.1E-32 T 01-11-2018 IPR001533 Pterin 4 alpha carbinolamine dehydratase GO:0006729|GO:0008124 KEGG: 00790+4.2.1.96|MetaCyc: PWY-7158 CDA09_07315 c3a72be1af606acaab418951d89b3d8c 98 Gene3D G3DSA:3.30.1360.20 1 97 2.3E-39 T 01-11-2018 IPR036428 Pterin 4 alpha carbinolamine dehydratase superfamily GO:0006729|GO:0008124 KEGG: 00790+4.2.1.96|MetaCyc: PWY-7158 CDA09_07315 c3a72be1af606acaab418951d89b3d8c 98 Hamap MF_00434 Putative pterin-4-alpha-carbinolamine dehydratase. 2 95 25.405 T 01-11-2018 IPR001533 Pterin 4 alpha carbinolamine dehydratase GO:0006729|GO:0008124 KEGG: 00790+4.2.1.96|MetaCyc: PWY-7158 CDA09_07315 c3a72be1af606acaab418951d89b3d8c 98 SUPERFAMILY SSF55248 1 95 8.63E-36 T 01-11-2018 IPR036428 Pterin 4 alpha carbinolamine dehydratase superfamily GO:0006729|GO:0008124 KEGG: 00790+4.2.1.96|MetaCyc: PWY-7158 CDA09_08455 eb28810be6979bac04a3f3a68aae8f8b 528 Pfam PF05762 VWA domain containing CoxE-like protein 300 442 1.7E-8 T 01-11-2018 IPR008912 Uncharacterised protein family CoxE-like CDA09_08455 eb28810be6979bac04a3f3a68aae8f8b 528 SUPERFAMILY SSF53300 313 453 4.04E-15 T 01-11-2018 IPR036465 von Willebrand factor A-like domain superfamily CDA09_08455 eb28810be6979bac04a3f3a68aae8f8b 528 Gene3D G3DSA:3.40.50.410 314 463 2.8E-8 T 01-11-2018 IPR036465 von Willebrand factor A-like domain superfamily CDA09_11585 43847f07c5a98ea11d91ed70c6a023bc 291 SUPERFAMILY SSF52540 3 287 1.12E-45 T 01-11-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CDA09_11585 43847f07c5a98ea11d91ed70c6a023bc 291 Gene3D G3DSA:3.40.50.300 1 290 1.6E-113 T 01-11-2018 CDA09_11585 43847f07c5a98ea11d91ed70c6a023bc 291 PRINTS PR00478 Phosphoribulokinase family signature 183 206 2.0E-35 T 01-11-2018 IPR006082 Phosphoribulokinase GO:0005524|GO:0005975|GO:0008974 KEGG: 00710+2.7.1.19|MetaCyc: PWY-5723 CDA09_11585 43847f07c5a98ea11d91ed70c6a023bc 291 PRINTS PR00478 Phosphoribulokinase family signature 165 182 2.0E-35 T 01-11-2018 IPR006082 Phosphoribulokinase GO:0005524|GO:0005975|GO:0008974 KEGG: 00710+2.7.1.19|MetaCyc: PWY-5723 CDA09_11585 43847f07c5a98ea11d91ed70c6a023bc 291 PRINTS PR00478 Phosphoribulokinase family signature 127 145 2.0E-35 T 01-11-2018 IPR006082 Phosphoribulokinase GO:0005524|GO:0005975|GO:0008974 KEGG: 00710+2.7.1.19|MetaCyc: PWY-5723 CDA09_11585 43847f07c5a98ea11d91ed70c6a023bc 291 PRINTS PR00478 Phosphoribulokinase family signature 12 29 2.0E-35 T 01-11-2018 IPR006082 Phosphoribulokinase GO:0005524|GO:0005975|GO:0008974 KEGG: 00710+2.7.1.19|MetaCyc: PWY-5723 CDA09_11585 43847f07c5a98ea11d91ed70c6a023bc 291 ProSitePatterns PS00567 Phosphoribulokinase signature. 165 178 - T 01-11-2018 IPR006082 Phosphoribulokinase GO:0005524|GO:0005975|GO:0008974 KEGG: 00710+2.7.1.19|MetaCyc: PWY-5723 CDA09_11585 43847f07c5a98ea11d91ed70c6a023bc 291 Pfam PF00485 Phosphoribulokinase / Uridine kinase family 7 215 4.9E-75 T 01-11-2018 IPR006083 Phosphoribulokinase/uridine kinase GO:0005524|GO:0016301 Reactome: R-HSA-73614 CDA09_16750 7a2d1631ae12c1f47a5aa1979bbd9807 317 Gene3D G3DSA:3.50.50.60 9 311 3.8E-121 T 01-11-2018 IPR036188 FAD/NAD(P)-binding domain superfamily CDA09_16750 7a2d1631ae12c1f47a5aa1979bbd9807 317 TIGRFAM TIGR01292 TRX_reduct: thioredoxin-disulfide reductase 7 312 2.3E-119 T 01-11-2018 IPR005982 Thioredoxin reductase GO:0004791|GO:0005737|GO:0019430|GO:0055114 KEGG: 00450+1.8.1.9 CDA09_16750 7a2d1631ae12c1f47a5aa1979bbd9807 317 Gene3D G3DSA:3.50.50.60 117 243 3.8E-121 T 01-11-2018 IPR036188 FAD/NAD(P)-binding domain superfamily CDA09_16750 7a2d1631ae12c1f47a5aa1979bbd9807 317 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 128 140 1.1E-76 T 01-11-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 CDA09_16750 7a2d1631ae12c1f47a5aa1979bbd9807 317 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 40 55 1.1E-76 T 01-11-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 CDA09_16750 7a2d1631ae12c1f47a5aa1979bbd9807 317 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 198 214 1.1E-76 T 01-11-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 CDA09_16750 7a2d1631ae12c1f47a5aa1979bbd9807 317 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 106 114 1.1E-76 T 01-11-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 CDA09_16750 7a2d1631ae12c1f47a5aa1979bbd9807 317 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 7 29 1.1E-76 T 01-11-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 CDA09_16750 7a2d1631ae12c1f47a5aa1979bbd9807 317 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 61 71 1.1E-76 T 01-11-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 CDA09_16750 7a2d1631ae12c1f47a5aa1979bbd9807 317 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 143 167 1.1E-76 T 01-11-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 CDA09_16750 7a2d1631ae12c1f47a5aa1979bbd9807 317 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 237 258 1.1E-76 T 01-11-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 CDA09_16750 7a2d1631ae12c1f47a5aa1979bbd9807 317 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 275 293 1.1E-76 T 01-11-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 CDA09_16750 7a2d1631ae12c1f47a5aa1979bbd9807 317 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 235 251 1.0E-39 T 01-11-2018 CDA09_16750 7a2d1631ae12c1f47a5aa1979bbd9807 317 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 265 287 1.0E-39 T 01-11-2018 CDA09_16750 7a2d1631ae12c1f47a5aa1979bbd9807 317 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 147 165 1.0E-39 T 01-11-2018 CDA09_16750 7a2d1631ae12c1f47a5aa1979bbd9807 317 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 8 27 1.0E-39 T 01-11-2018 CDA09_16750 7a2d1631ae12c1f47a5aa1979bbd9807 317 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 105 123 1.0E-39 T 01-11-2018 CDA09_16750 7a2d1631ae12c1f47a5aa1979bbd9807 317 SUPERFAMILY SSF51905 1 312 1.94E-52 T 01-11-2018 IPR036188 FAD/NAD(P)-binding domain superfamily CDA09_16750 7a2d1631ae12c1f47a5aa1979bbd9807 317 ProSitePatterns PS00573 Pyridine nucleotide-disulphide oxidoreductases class-II active site. 135 155 - T 01-11-2018 IPR008255 Pyridine nucleotide-disulphide oxidoreductase, class-II, active site GO:0016491|GO:0055114 CDA09_16750 7a2d1631ae12c1f47a5aa1979bbd9807 317 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 7 300 2.8E-47 T 01-11-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 CDA09_14610 ccb69f426b465aa2fd40545b67124032 486 Pfam PF01977 3-octaprenyl-4-hydroxybenzoate carboxy-lyase 15 416 6.5E-111 T 01-11-2018 IPR002830 UbiD decarboxylyase family GO:0016831 KEGG: 00130+4.1.1.98|MetaCyc: PWY-5855|MetaCyc: PWY-5856|MetaCyc: PWY-5857|MetaCyc: PWY-6708|MetaCyc: PWY-6978 CDA09_14610 ccb69f426b465aa2fd40545b67124032 486 TIGRFAM TIGR02723 phenyl_P_alpha: phenylphosphate carboxylase, alpha subunit 2 484 0.0 T 01-11-2018 IPR014095 Phenylphosphate carboxylase, alpha subunit CDA09_14610 ccb69f426b465aa2fd40545b67124032 486 SUPERFAMILY SSF50475 9 309 2.59E-80 T 01-11-2018 CDA09_14610 ccb69f426b465aa2fd40545b67124032 486 TIGRFAM TIGR00148 TIGR00148: decarboxylase, UbiD family 11 429 6.7E-80 T 01-11-2018 IPR002830 UbiD decarboxylyase family GO:0016831 KEGG: 00130+4.1.1.98|MetaCyc: PWY-5855|MetaCyc: PWY-5856|MetaCyc: PWY-5857|MetaCyc: PWY-6708|MetaCyc: PWY-6978 CDA09_14610 ccb69f426b465aa2fd40545b67124032 486 SUPERFAMILY SSF143968 316 481 5.49E-36 T 01-11-2018 CDA09_14610 ccb69f426b465aa2fd40545b67124032 486 Gene3D G3DSA:3.40.1670.10 325 444 1.3E-24 T 01-11-2018 CDA09_16515 5c4db3696efbd6ea69b8024b6bc2428e 419 SMART SM00357 52 118 7.6E-14 T 01-11-2018 IPR011129 Cold shock domain GO:0003676 CDA09_16515 5c4db3696efbd6ea69b8024b6bc2428e 419 Pfam PF07498 Rho termination factor, N-terminal domain 5 47 1.6E-14 T 01-11-2018 IPR011112 Rho termination factor, N-terminal GO:0006353 CDA09_16515 5c4db3696efbd6ea69b8024b6bc2428e 419 Pfam PF07497 Rho termination factor, RNA-binding domain 52 125 3.8E-30 T 01-11-2018 IPR011113 Rho termination factor, RNA-binding domain GO:0003723|GO:0006353 CDA09_16515 5c4db3696efbd6ea69b8024b6bc2428e 419 SUPERFAMILY SSF68912 1 46 2.47E-10 T 01-11-2018 IPR036269 Rho termination factor, N-terminal domain superfamily CDA09_16515 5c4db3696efbd6ea69b8024b6bc2428e 419 Gene3D G3DSA:3.40.50.300 130 417 1.0E-130 T 01-11-2018 CDA09_16515 5c4db3696efbd6ea69b8024b6bc2428e 419 Gene3D G3DSA:1.10.720.10 1 47 9.7E-18 T 01-11-2018 CDA09_16515 5c4db3696efbd6ea69b8024b6bc2428e 419 Hamap MF_01884 Transcription termination factor Rho [rho]. 1 419 244.045 T 01-11-2018 IPR004665 Transcription termination factor Rho GO:0003723|GO:0005524|GO:0006353|GO:0008186 CDA09_16515 5c4db3696efbd6ea69b8024b6bc2428e 419 SMART SM00382 170 356 4.0E-8 T 01-11-2018 IPR003593 AAA+ ATPase domain CDA09_16515 5c4db3696efbd6ea69b8024b6bc2428e 419 Pfam PF00006 ATP synthase alpha/beta family, nucleotide-binding domain 160 363 1.9E-24 T 01-11-2018 IPR000194 ATPase, F1/V1/A1 complex, alpha/beta subunit, nucleotide-binding domain GO:0005524 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980 CDA09_16515 5c4db3696efbd6ea69b8024b6bc2428e 419 SUPERFAMILY SSF52540 90 371 1.59E-69 T 01-11-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CDA09_16515 5c4db3696efbd6ea69b8024b6bc2428e 419 SMART SM00959 5 47 1.8E-16 T 01-11-2018 IPR011112 Rho termination factor, N-terminal GO:0006353 CDA09_16515 5c4db3696efbd6ea69b8024b6bc2428e 419 SUPERFAMILY SSF50249 49 125 9.42E-28 T 01-11-2018 IPR012340 Nucleic acid-binding, OB-fold CDA09_16515 5c4db3696efbd6ea69b8024b6bc2428e 419 TIGRFAM TIGR00767 rho: transcription termination factor Rho 2 417 7.5E-211 T 01-11-2018 IPR004665 Transcription termination factor Rho GO:0003723|GO:0005524|GO:0006353|GO:0008186 CDA09_16515 5c4db3696efbd6ea69b8024b6bc2428e 419 Gene3D G3DSA:2.40.50.140 48 123 8.0E-32 T 01-11-2018 CDA09_11925 8b828e5e119837a60d0323ad1810ae79 242 TIGRFAM TIGR01406 dnaQ_proteo: DNA polymerase III, epsilon subunit 2 231 2.0E-90 T 01-11-2018 IPR006309 DNA polymerase 3, epsilon subunit GO:0003677|GO:0003887|GO:0006260 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 CDA09_11925 8b828e5e119837a60d0323ad1810ae79 242 TIGRFAM TIGR00573 dnaq: exonuclease, DNA polymerase III, epsilon subunit family 4 177 3.5E-63 T 01-11-2018 IPR006054 DNA polymerase III epsilon subunit, exonuclease domain GO:0003677|GO:0003887|GO:0006260 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 CDA09_11925 8b828e5e119837a60d0323ad1810ae79 242 SMART SM00479 2 174 2.1E-50 T 01-11-2018 IPR013520 Exonuclease, RNase T/DNA polymerase III CDA09_11925 8b828e5e119837a60d0323ad1810ae79 242 Pfam PF00929 Exonuclease 4 165 3.9E-36 T 01-11-2018 IPR013520 Exonuclease, RNase T/DNA polymerase III CDA09_11925 8b828e5e119837a60d0323ad1810ae79 242 Gene3D G3DSA:3.30.420.10 2 180 2.0E-54 T 01-11-2018 IPR036397 Ribonuclease H superfamily GO:0003676 CDA09_11925 8b828e5e119837a60d0323ad1810ae79 242 SUPERFAMILY SSF53098 2 176 3.8E-54 T 01-11-2018 IPR012337 Ribonuclease H-like superfamily CDA09_06190 cd76bd07879b011171da482fae594969 271 PIRSF PIRSF000388 1 271 2.1E-105 T 01-11-2018 IPR003700 Ketopantoate hydroxymethyltransferase GO:0003864|GO:0015940 KEGG: 00770+2.1.2.11|MetaCyc: PWY-6654 CDA09_06190 cd76bd07879b011171da482fae594969 271 SUPERFAMILY SSF51621 10 271 1.77E-104 T 01-11-2018 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain superfamily GO:0003824 CDA09_06190 cd76bd07879b011171da482fae594969 271 Hamap MF_00156 3-methyl-2-oxobutanoate hydroxymethyltransferase [panB]. 10 271 43.35 T 01-11-2018 IPR003700 Ketopantoate hydroxymethyltransferase GO:0003864|GO:0015940 KEGG: 00770+2.1.2.11|MetaCyc: PWY-6654 CDA09_06190 cd76bd07879b011171da482fae594969 271 Pfam PF02548 Ketopantoate hydroxymethyltransferase 10 266 2.6E-112 T 01-11-2018 IPR003700 Ketopantoate hydroxymethyltransferase GO:0003864|GO:0015940 KEGG: 00770+2.1.2.11|MetaCyc: PWY-6654 CDA09_06190 cd76bd07879b011171da482fae594969 271 Gene3D G3DSA:3.20.20.60 8 271 2.1E-112 T 01-11-2018 CDA09_06190 cd76bd07879b011171da482fae594969 271 TIGRFAM TIGR00222 panB: 3-methyl-2-oxobutanoate hydroxymethyltransferase 10 271 2.8E-95 T 01-11-2018 IPR003700 Ketopantoate hydroxymethyltransferase GO:0003864|GO:0015940 KEGG: 00770+2.1.2.11|MetaCyc: PWY-6654 CDA09_17135 3a9aff457e851c9957357bc762b114b3 652 Gene3D G3DSA:3.40.50.720 387 647 2.7E-63 T 01-11-2018 CDA09_17135 3a9aff457e851c9957357bc762b114b3 652 PRINTS PR00419 Adrenodoxin reductase family signature 410 423 2.0E-6 T 01-11-2018 CDA09_17135 3a9aff457e851c9957357bc762b114b3 652 PRINTS PR00419 Adrenodoxin reductase family signature 387 409 2.0E-6 T 01-11-2018 CDA09_17135 3a9aff457e851c9957357bc762b114b3 652 Gene3D G3DSA:3.20.20.70 9 374 2.4E-113 T 01-11-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 CDA09_17135 3a9aff457e851c9957357bc762b114b3 652 Gene3D G3DSA:3.50.50.60 482 608 2.7E-63 T 01-11-2018 IPR036188 FAD/NAD(P)-binding domain superfamily CDA09_17135 3a9aff457e851c9957357bc762b114b3 652 SUPERFAMILY SSF51395 9 371 2.29E-100 T 01-11-2018 CDA09_17135 3a9aff457e851c9957357bc762b114b3 652 SUPERFAMILY SSF51905 360 652 4.4E-24 T 01-11-2018 IPR036188 FAD/NAD(P)-binding domain superfamily CDA09_17135 3a9aff457e851c9957357bc762b114b3 652 Pfam PF13450 NAD(P)-binding Rossmann-like domain 390 425 2.7E-7 T 01-11-2018 CDA09_17135 3a9aff457e851c9957357bc762b114b3 652 Pfam PF00724 NADH:flavin oxidoreductase / NADH oxidase family 13 338 9.9E-68 T 01-11-2018 IPR001155 NADH:flavin oxidoreductase/NADH oxidase, N-terminal GO:0010181|GO:0016491|GO:0055114 CDA09_01130 2f4c24f290b36ab26fbfcf73c58bd496 176 Pfam PF13975 gag-polyprotein putative aspartyl protease 44 138 4.7E-12 T 01-11-2018 CDA09_01130 2f4c24f290b36ab26fbfcf73c58bd496 176 Gene3D G3DSA:2.40.70.10 27 158 2.9E-17 T 01-11-2018 IPR021109 Aspartic peptidase domain superfamily CDA09_01130 2f4c24f290b36ab26fbfcf73c58bd496 176 SUPERFAMILY SSF50630 38 139 2.25E-5 T 01-11-2018 IPR021109 Aspartic peptidase domain superfamily CDA09_17380 5ede0a3b15a6f98aea95623411911fda 292 PIRSF PIRSF001365 1 291 2.3E-92 T 01-11-2018 IPR002220 DapA-like GO:0016829 CDA09_17380 5ede0a3b15a6f98aea95623411911fda 292 Pfam PF00701 Dihydrodipicolinate synthetase family 2 286 1.0E-102 T 01-11-2018 IPR002220 DapA-like GO:0016829 CDA09_17380 5ede0a3b15a6f98aea95623411911fda 292 SUPERFAMILY SSF51569 1 289 1.36E-105 T 01-11-2018 CDA09_17380 5ede0a3b15a6f98aea95623411911fda 292 SMART SM01130 1 289 6.7E-147 T 01-11-2018 IPR002220 DapA-like GO:0016829 CDA09_17380 5ede0a3b15a6f98aea95623411911fda 292 Hamap MF_00418 4-hydroxy-tetrahydrodipicolinate synthase [dapA]. 1 287 66.519 T 01-11-2018 IPR005263 4-hydroxy-tetrahydrodipicolinate synthase, DapA GO:0008840|GO:0009089 KEGG: 00261+4.3.3.7|KEGG: 00300+4.3.3.7|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097 CDA09_17380 5ede0a3b15a6f98aea95623411911fda 292 Gene3D G3DSA:3.20.20.70 2 291 8.0E-112 T 01-11-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 CDA09_17380 5ede0a3b15a6f98aea95623411911fda 292 ProSitePatterns PS00666 Dihydrodipicolinate synthase signature 2. 133 163 - T 01-11-2018 IPR020625 Schiff base-forming aldolase, active site GO:0016829 KEGG: 00261+4.3.3.7|KEGG: 00300+4.3.3.7|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|Reactome: R-HSA-389661 CDA09_17380 5ede0a3b15a6f98aea95623411911fda 292 PRINTS PR00146 Dihydrodipicolinate synthase signature 35 56 5.8E-36 T 01-11-2018 IPR002220 DapA-like GO:0016829 CDA09_17380 5ede0a3b15a6f98aea95623411911fda 292 PRINTS PR00146 Dihydrodipicolinate synthase signature 71 89 5.8E-36 T 01-11-2018 IPR002220 DapA-like GO:0016829 CDA09_17380 5ede0a3b15a6f98aea95623411911fda 292 PRINTS PR00146 Dihydrodipicolinate synthase signature 103 119 5.8E-36 T 01-11-2018 IPR002220 DapA-like GO:0016829 CDA09_17380 5ede0a3b15a6f98aea95623411911fda 292 PRINTS PR00146 Dihydrodipicolinate synthase signature 128 145 5.8E-36 T 01-11-2018 IPR002220 DapA-like GO:0016829 CDA09_17380 5ede0a3b15a6f98aea95623411911fda 292 TIGRFAM TIGR00674 dapA: 4-hydroxy-tetrahydrodipicolinate synthase 4 286 1.3E-111 T 01-11-2018 IPR005263 4-hydroxy-tetrahydrodipicolinate synthase, DapA GO:0008840|GO:0009089 KEGG: 00261+4.3.3.7|KEGG: 00300+4.3.3.7|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097 CDA09_17380 5ede0a3b15a6f98aea95623411911fda 292 ProSitePatterns PS00665 Dihydrodipicolinate synthase signature 1. 38 55 - T 01-11-2018 IPR020624 Schiff base-forming aldolase, conserved site GO:0016829 KEGG: 00261+4.3.3.7|KEGG: 00300+4.3.3.7|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097 CDA09_02615 4c6e5b9c83f18952d0f840878078db68 352 Pfam PF02277 Phosphoribosyltransferase 5 347 3.2E-130 T 01-11-2018 IPR003200 Nicotinate-nucleotide-dimethylbenzimidazole phosphoribosyltransferase-like GO:0008939|GO:0009236 KEGG: 00860+2.4.2.21|MetaCyc: PWY-5509|MetaCyc: PWY-6269|MetaCyc: PWY-7964|MetaCyc: PWY-7965|MetaCyc: PWY-7966|MetaCyc: PWY-7967|MetaCyc: PWY-7968|MetaCyc: PWY-7969|MetaCyc: PWY-7970 CDA09_02615 4c6e5b9c83f18952d0f840878078db68 352 Gene3D G3DSA:3.40.50.10210 51 330 5.2E-125 T 01-11-2018 CDA09_02615 4c6e5b9c83f18952d0f840878078db68 352 TIGRFAM TIGR03160 cobT_DBIPRT: nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase 9 347 2.0E-134 T 01-11-2018 IPR017846 Nicotinate-nucleotide-dimethylbenzimidazole phosphoribosyltransferase, prokaryotic GO:0008939|GO:0009163 KEGG: 00860+2.4.2.21|MetaCyc: PWY-5509|MetaCyc: PWY-6269|MetaCyc: PWY-7964|MetaCyc: PWY-7965|MetaCyc: PWY-7966|MetaCyc: PWY-7967|MetaCyc: PWY-7968|MetaCyc: PWY-7969|MetaCyc: PWY-7970 CDA09_02615 4c6e5b9c83f18952d0f840878078db68 352 Gene3D G3DSA:1.10.1610.10 19 347 5.2E-125 T 01-11-2018 IPR023195 Nicotinate-nucleotide-dimethylbenzimidazole phosphoribosyltransferase, N-terminal GO:0008939|GO:0009236 KEGG: 00860+2.4.2.21|MetaCyc: PWY-5509|MetaCyc: PWY-6269|MetaCyc: PWY-7964|MetaCyc: PWY-7965|MetaCyc: PWY-7966|MetaCyc: PWY-7967|MetaCyc: PWY-7968|MetaCyc: PWY-7969|MetaCyc: PWY-7970 CDA09_02615 4c6e5b9c83f18952d0f840878078db68 352 SUPERFAMILY SSF52733 2 348 8.37E-116 T 01-11-2018 IPR036087 Nicotinate-nucleotide-dimethylbenzimidazole phosphoribosyltransferase-like superfamily GO:0008939|GO:0009236 KEGG: 00860+2.4.2.21|MetaCyc: PWY-5509|MetaCyc: PWY-6269|MetaCyc: PWY-7964|MetaCyc: PWY-7965|MetaCyc: PWY-7966|MetaCyc: PWY-7967|MetaCyc: PWY-7968|MetaCyc: PWY-7969|MetaCyc: PWY-7970 CDA09_02615 4c6e5b9c83f18952d0f840878078db68 352 Hamap MF_00230 Nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase [cobT]. 7 349 34.132 T 01-11-2018 IPR017846 Nicotinate-nucleotide-dimethylbenzimidazole phosphoribosyltransferase, prokaryotic GO:0008939|GO:0009163 KEGG: 00860+2.4.2.21|MetaCyc: PWY-5509|MetaCyc: PWY-6269|MetaCyc: PWY-7964|MetaCyc: PWY-7965|MetaCyc: PWY-7966|MetaCyc: PWY-7967|MetaCyc: PWY-7968|MetaCyc: PWY-7969|MetaCyc: PWY-7970 CDA09_00610 39c9fb11779352463733232ad975b99c 90 Gene3D G3DSA:3.30.70.260 2 90 1.4E-33 T 01-11-2018 CDA09_00610 39c9fb11779352463733232ad975b99c 90 SUPERFAMILY SSF117991 4 90 2.62E-28 T 01-11-2018 IPR027471 YbeD-like domain superfamily CDA09_00610 39c9fb11779352463733232ad975b99c 90 Pfam PF04359 Protein of unknown function (DUF493) 7 90 8.7E-35 T 01-11-2018 IPR007454 Uncharacterised protein family UPF0250 CDA09_00610 39c9fb11779352463733232ad975b99c 90 Hamap MF_00659 UPF0250 protein YbeD [ybeD]. 2 90 22.838 T 01-11-2018 IPR007454 Uncharacterised protein family UPF0250 CDA09_17090 04756c6842bbc08452589dd2a8554960 444 SUPERFAMILY SSF51905 6 441 1.23E-36 T 01-11-2018 IPR036188 FAD/NAD(P)-binding domain superfamily CDA09_17090 04756c6842bbc08452589dd2a8554960 444 SUPERFAMILY SSF56425 238 389 4.88E-17 T 01-11-2018 IPR027477 Succinate dehydrogenase/fumarate reductase flavoprotein, catalytic domain superfamily Reactome: R-HSA-611105|Reactome: R-HSA-71403 CDA09_17090 04756c6842bbc08452589dd2a8554960 444 Pfam PF00890 FAD binding domain 9 426 2.1E-38 T 01-11-2018 IPR003953 FAD-dependent oxidoreductase 2, FAD binding domain Reactome: R-HSA-611105|Reactome: R-HSA-71403 CDA09_17090 04756c6842bbc08452589dd2a8554960 444 Gene3D G3DSA:3.90.700.10 219 385 4.6E-76 T 01-11-2018 IPR027477 Succinate dehydrogenase/fumarate reductase flavoprotein, catalytic domain superfamily Reactome: R-HSA-611105|Reactome: R-HSA-71403 CDA09_17090 04756c6842bbc08452589dd2a8554960 444 Gene3D G3DSA:3.50.50.60 8 441 4.6E-76 T 01-11-2018 IPR036188 FAD/NAD(P)-binding domain superfamily CDA09_17090 04756c6842bbc08452589dd2a8554960 444 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 164 173 1.2E-5 T 01-11-2018 CDA09_17090 04756c6842bbc08452589dd2a8554960 444 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 9 31 1.2E-5 T 01-11-2018 CDA09_17220 52b71c69e973182682187698bdef4144 427 Gene3D G3DSA:3.40.50.150 121 422 1.2E-83 T 01-11-2018 CDA09_17220 52b71c69e973182682187698bdef4144 427 PRINTS PR02008 RNA (C5-cytosine) methyltransferase signature 405 422 4.2E-28 T 01-11-2018 IPR023267 RNA (C5-cytosine) methyltransferase CDA09_17220 52b71c69e973182682187698bdef4144 427 PRINTS PR02008 RNA (C5-cytosine) methyltransferase signature 302 314 4.2E-28 T 01-11-2018 IPR023267 RNA (C5-cytosine) methyltransferase CDA09_17220 52b71c69e973182682187698bdef4144 427 PRINTS PR02008 RNA (C5-cytosine) methyltransferase signature 352 368 4.2E-28 T 01-11-2018 IPR023267 RNA (C5-cytosine) methyltransferase CDA09_17220 52b71c69e973182682187698bdef4144 427 PRINTS PR02008 RNA (C5-cytosine) methyltransferase signature 233 243 4.2E-28 T 01-11-2018 IPR023267 RNA (C5-cytosine) methyltransferase CDA09_17220 52b71c69e973182682187698bdef4144 427 PRINTS PR02008 RNA (C5-cytosine) methyltransferase signature 204 218 4.2E-28 T 01-11-2018 IPR023267 RNA (C5-cytosine) methyltransferase CDA09_17220 52b71c69e973182682187698bdef4144 427 SUPERFAMILY SSF53335 123 423 1.33E-71 T 01-11-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase CDA09_17220 52b71c69e973182682187698bdef4144 427 Pfam PF17125 N-terminal domain of 16S rRNA methyltransferase RsmF 142 217 3.9E-6 T 01-11-2018 IPR031341 Ribosomal RNA small subunit methyltransferase F, N-terminal Reactome: R-HSA-6790901|Reactome: R-HSA-8869496 CDA09_17220 52b71c69e973182682187698bdef4144 427 Pfam PF01189 16S rRNA methyltransferase RsmB/F 223 420 2.4E-50 T 01-11-2018 IPR001678 SAM-dependent methyltransferase RsmB/NOP2-type GO:0008168 CDA09_02605 0e065e94a62d2bc284fd9390ed24874f 183 SUPERFAMILY SSF53254 1 172 1.31E-35 T 01-11-2018 IPR029033 Histidine phosphatase superfamily CDA09_02605 0e065e94a62d2bc284fd9390ed24874f 183 PIRSF PIRSF000709 45 182 3.7E-4 T 01-11-2018 CDA09_02605 0e065e94a62d2bc284fd9390ed24874f 183 Gene3D G3DSA:3.40.50.1240 1 180 3.1E-32 T 01-11-2018 IPR029033 Histidine phosphatase superfamily CDA09_02605 0e065e94a62d2bc284fd9390ed24874f 183 Pfam PF00300 Histidine phosphatase superfamily (branch 1) 3 182 4.2E-32 T 01-11-2018 IPR013078 Histidine phosphatase superfamily, clade-1 CDA09_02605 0e065e94a62d2bc284fd9390ed24874f 183 SMART SM00855 2 144 2.0E-12 T 01-11-2018 IPR013078 Histidine phosphatase superfamily, clade-1 CDA09_10600 8eb3057caea257a45a821f1b2f378a0c 365 Pfam PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain 15 134 1.6E-23 T 01-11-2018 IPR013341 Mandelate racemase/muconate lactonizing enzyme, N-terminal domain CDA09_10600 8eb3057caea257a45a821f1b2f378a0c 365 Gene3D G3DSA:3.30.390.10 18 126 3.1E-116 T 01-11-2018 IPR029017 Enolase-like, N-terminal CDA09_10600 8eb3057caea257a45a821f1b2f378a0c 365 SUPERFAMILY SSF54826 11 137 1.38E-23 T 01-11-2018 CDA09_10600 8eb3057caea257a45a821f1b2f378a0c 365 ProSitePatterns PS00908 Mandelate racemase / muconate lactonizing enzyme family signature 1. 109 134 - T 01-11-2018 IPR018110 Mandelate racemase/muconate lactonizing enzyme, conserved site GO:0009063 CDA09_10600 8eb3057caea257a45a821f1b2f378a0c 365 SUPERFAMILY SSF51604 122 364 4.19E-68 T 01-11-2018 IPR036849 Enolase-like, C-terminal domain superfamily CDA09_10600 8eb3057caea257a45a821f1b2f378a0c 365 ProSitePatterns PS00909 Mandelate racemase / muconate lactonizing enzyme family signature 2. 198 229 - T 01-11-2018 IPR018110 Mandelate racemase/muconate lactonizing enzyme, conserved site GO:0009063 CDA09_10600 8eb3057caea257a45a821f1b2f378a0c 365 Pfam PF13378 Enolase C-terminal domain-like 160 357 1.1E-55 T 01-11-2018 IPR029065 Enolase C-terminal domain-like CDA09_10600 8eb3057caea257a45a821f1b2f378a0c 365 Gene3D G3DSA:3.20.20.120 127 353 3.1E-116 T 01-11-2018 IPR036849 Enolase-like, C-terminal domain superfamily CDA09_10600 8eb3057caea257a45a821f1b2f378a0c 365 SMART SM00922 152 248 6.7E-25 T 01-11-2018 IPR013342 Mandelate racemase/muconate lactonizing enzyme, C-terminal CDA09_05790 a85f61c0c12a6f638b0d961a4389cc98 94 Pfam PF10087 Uncharacterized protein conserved in bacteria (DUF2325) 3 80 5.6E-13 T 01-11-2018 IPR016772 Uncharacterised conserved protein UCP020408 CDA09_03015 e3b099ba0d5a288072d1b2802c5ac095 255 Pfam PF13672 Protein phosphatase 2C 10 206 7.9E-10 T 01-11-2018 CDA09_03015 e3b099ba0d5a288072d1b2802c5ac095 255 SUPERFAMILY SSF81606 5 245 2.75E-49 T 01-11-2018 IPR036457 PPM-type phosphatase domain superfamily KEGG: 04658+3.1.3.16|KEGG: 04660+3.1.3.16 CDA09_03015 e3b099ba0d5a288072d1b2802c5ac095 255 SMART SM00331 21 245 5.8E-15 T 01-11-2018 IPR001932 PPM-type phosphatase domain GO:0003824 KEGG: 04658+3.1.3.16|KEGG: 04660+3.1.3.16 CDA09_03015 e3b099ba0d5a288072d1b2802c5ac095 255 Gene3D G3DSA:3.60.40.10 1 247 1.7E-52 T 01-11-2018 IPR036457 PPM-type phosphatase domain superfamily KEGG: 04658+3.1.3.16|KEGG: 04660+3.1.3.16 CDA09_03015 e3b099ba0d5a288072d1b2802c5ac095 255 SMART SM00332 1 243 7.5E-10 T 01-11-2018 IPR001932 PPM-type phosphatase domain GO:0003824 KEGG: 04658+3.1.3.16|KEGG: 04660+3.1.3.16 CDA09_12705 cf47d8909d160f3c42a41bc112fd0d8a 141 SUPERFAMILY SSF55729 2 141 2.62E-31 T 01-11-2018 IPR016181 Acyl-CoA N-acyltransferase CDA09_12705 cf47d8909d160f3c42a41bc112fd0d8a 141 Gene3D G3DSA:3.40.630.30 1 141 1.2E-40 T 01-11-2018 CDA09_12705 cf47d8909d160f3c42a41bc112fd0d8a 141 TIGRFAM TIGR01575 rimI: ribosomal-protein-alanine acetyltransferase 7 137 2.9E-35 T 01-11-2018 IPR006464 N-acetyltransferase RimI/Ard1 GO:0006474|GO:0016407 CDA09_12705 cf47d8909d160f3c42a41bc112fd0d8a 141 Pfam PF00583 Acetyltransferase (GNAT) family 22 114 9.6E-14 T 01-11-2018 IPR000182 GNAT domain CDA09_04765 a8ab3724878790a15e61d0bbc2266e01 578 SUPERFAMILY SSF50998 38 553 1.96E-149 T 01-11-2018 IPR011047 Quinoprotein alcohol dehydrogenase-like superfamily CDA09_04765 a8ab3724878790a15e61d0bbc2266e01 578 Gene3D G3DSA:2.140.10.10 34 578 7.4E-183 T 01-11-2018 CDA09_04765 a8ab3724878790a15e61d0bbc2266e01 578 Pfam PF13360 PQQ-like domain 72 219 8.5E-19 T 01-11-2018 IPR002372 Pyrrolo-quinoline quinone repeat CDA09_04765 a8ab3724878790a15e61d0bbc2266e01 578 Pfam PF13360 PQQ-like domain 458 541 1.1E-8 T 01-11-2018 IPR002372 Pyrrolo-quinoline quinone repeat CDA09_04765 a8ab3724878790a15e61d0bbc2266e01 578 SMART SM00564 266 295 230.0 T 01-11-2018 IPR018391 Pyrrolo-quinoline quinone beta-propeller repeat CDA09_04765 a8ab3724878790a15e61d0bbc2266e01 578 SMART SM00564 135 166 1.0E-4 T 01-11-2018 IPR018391 Pyrrolo-quinoline quinone beta-propeller repeat CDA09_04765 a8ab3724878790a15e61d0bbc2266e01 578 SMART SM00564 179 217 0.72 T 01-11-2018 IPR018391 Pyrrolo-quinoline quinone beta-propeller repeat CDA09_04765 a8ab3724878790a15e61d0bbc2266e01 578 SMART SM00564 86 118 0.0015 T 01-11-2018 IPR018391 Pyrrolo-quinoline quinone beta-propeller repeat CDA09_04765 a8ab3724878790a15e61d0bbc2266e01 578 SMART SM00564 444 476 100.0 T 01-11-2018 IPR018391 Pyrrolo-quinoline quinone beta-propeller repeat CDA09_04765 a8ab3724878790a15e61d0bbc2266e01 578 SMART SM00564 484 518 1.1 T 01-11-2018 IPR018391 Pyrrolo-quinoline quinone beta-propeller repeat CDA09_04765 a8ab3724878790a15e61d0bbc2266e01 578 TIGRFAM TIGR03075 PQQ_enz_alc_DH: PQQ-dependent dehydrogenase, methanol/ethanol family 31 545 4.6E-172 T 01-11-2018 IPR017512 PQQ-dependent dehydrogenase, methanol/ethanol family GO:0005509|GO:0016020|GO:0016614|GO:0055114 CDA09_17210 1114814afc6d1dfe2e409a1278ae1820 431 SUPERFAMILY SSF82861 163 245 1.83E-11 T 01-11-2018 IPR011014 Mechanosensitive ion channel MscS, transmembrane-2 GO:0016020 CDA09_17210 1114814afc6d1dfe2e409a1278ae1820 431 Gene3D G3DSA:3.30.70.100 315 408 2.0E-22 T 01-11-2018 CDA09_17210 1114814afc6d1dfe2e409a1278ae1820 431 SUPERFAMILY SSF82689 315 414 2.35E-27 T 01-11-2018 IPR011066 Mechanosensitive ion channel MscS, C-terminal GO:0016020 CDA09_17210 1114814afc6d1dfe2e409a1278ae1820 431 SUPERFAMILY SSF50182 247 311 4.58E-13 T 01-11-2018 IPR010920 LSM domain superfamily CDA09_17210 1114814afc6d1dfe2e409a1278ae1820 431 Gene3D G3DSA:2.30.30.60 263 310 2.5E-6 T 01-11-2018 IPR023408 Mechanosensitive ion channel MscS domain superfamily CDA09_17210 1114814afc6d1dfe2e409a1278ae1820 431 Pfam PF00924 Mechanosensitive ion channel 205 404 1.3E-44 T 01-11-2018 IPR006685 Mechanosensitive ion channel MscS GO:0016020|GO:0055085 CDA09_13090 7ea796733c776bf4e0bac92a721aa3fc 106 Hamap MF_00460 Protein RnfH [rnfH]. 5 96 24.409 T 01-11-2018 IPR005346 RnfH protein CDA09_13090 7ea796733c776bf4e0bac92a721aa3fc 106 SUPERFAMILY SSF54285 4 80 1.13E-23 T 01-11-2018 IPR016155 Molybdopterin synthase/thiamin biosynthesis sulphur carrier, beta-grasp CDA09_13090 7ea796733c776bf4e0bac92a721aa3fc 106 Gene3D G3DSA:3.10.20.280 1 90 7.6E-32 T 01-11-2018 IPR037021 RnfH superfamily CDA09_13090 7ea796733c776bf4e0bac92a721aa3fc 106 Pfam PF03658 RnfH family Ubiquitin 5 88 1.1E-33 T 01-11-2018 IPR005346 RnfH protein CDA09_20470 084d6f175e293e1ffcaca65a0c87a413 211 Pfam PF00881 Nitroreductase family 16 156 1.2E-10 T 01-11-2018 IPR029479 Nitroreductase Reactome: R-HSA-209968 CDA09_20470 084d6f175e293e1ffcaca65a0c87a413 211 SUPERFAMILY SSF55469 14 207 3.8E-37 T 01-11-2018 IPR000415 Nitroreductase-like GO:0016491 Reactome: R-HSA-209968 CDA09_20470 084d6f175e293e1ffcaca65a0c87a413 211 Hamap MF_01204 Probable malonic semialdehyde reductase RutE [rutE]. 2 211 46.908 T 01-11-2018 IPR023936 NADH dehydrogenase/NAD(P)H nitroreductase, putative, RutE GO:0016491|GO:0055114 CDA09_20470 084d6f175e293e1ffcaca65a0c87a413 211 Gene3D G3DSA:3.40.109.10 13 211 6.8E-23 T 01-11-2018 IPR000415 Nitroreductase-like GO:0016491 Reactome: R-HSA-209968 CDA09_11790 74bc26598ec2cfe2297e961d2e2cfa1b 204 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 92 125 1.1E-7 T 01-11-2018 IPR001451 Hexapeptide repeat CDA09_11790 74bc26598ec2cfe2297e961d2e2cfa1b 204 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 20 47 2.6E-5 T 01-11-2018 IPR001451 Hexapeptide repeat CDA09_11790 74bc26598ec2cfe2297e961d2e2cfa1b 204 TIGRFAM TIGR02287 PaaY: phenylacetic acid degradation protein PaaY 6 196 1.3E-97 T 01-11-2018 IPR011974 Phenylacetic acid degradation protein PaaY CDA09_11790 74bc26598ec2cfe2297e961d2e2cfa1b 204 Gene3D G3DSA:2.160.10.10 5 178 2.9E-50 T 01-11-2018 CDA09_11790 74bc26598ec2cfe2297e961d2e2cfa1b 204 SUPERFAMILY SSF51161 7 171 1.03E-44 T 01-11-2018 IPR011004 Trimeric LpxA-like superfamily CDA09_10295 eb87832764b5f58c1126693910a92dd7 678 Pfam PF13435 Cytochrome c554 and c-prime 167 204 0.0049 T 01-11-2018 IPR023155 Cytochrome c-552/4 CDA09_10295 eb87832764b5f58c1126693910a92dd7 678 SUPERFAMILY SSF48452 557 674 1.45E-14 T 01-11-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 CDA09_10295 eb87832764b5f58c1126693910a92dd7 678 Pfam PF09699 Doubled CXXCH motif (Paired_CXXCH_1) 302 329 2.9E-6 T 01-11-2018 IPR010177 Doubled CXXCH motif CDA09_10295 eb87832764b5f58c1126693910a92dd7 678 SMART SM00028 559 592 0.014 T 01-11-2018 IPR019734 Tetratricopeptide repeat GO:0005515 CDA09_10295 eb87832764b5f58c1126693910a92dd7 678 SMART SM00028 627 660 87.0 T 01-11-2018 IPR019734 Tetratricopeptide repeat GO:0005515 CDA09_10295 eb87832764b5f58c1126693910a92dd7 678 SUPERFAMILY SSF48371 434 531 4.16E-7 T 01-11-2018 IPR016024 Armadillo-type fold CDA09_10295 eb87832764b5f58c1126693910a92dd7 678 SUPERFAMILY SSF48695 30 421 1.94E-60 T 01-11-2018 IPR036280 Multiheme cytochrome superfamily CDA09_10295 eb87832764b5f58c1126693910a92dd7 678 Gene3D G3DSA:1.10.1130.10 155 271 1.1E-8 T 01-11-2018 CDA09_10295 eb87832764b5f58c1126693910a92dd7 678 Gene3D G3DSA:1.25.40.10 542 677 5.3E-17 T 01-11-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 CDA09_10295 eb87832764b5f58c1126693910a92dd7 678 Gene3D G3DSA:1.25.10.10 429 541 1.4E-5 T 01-11-2018 IPR011989 Armadillo-like helical CDA09_10295 eb87832764b5f58c1126693910a92dd7 678 Gene3D G3DSA:3.90.10.10 277 407 3.6E-7 T 01-11-2018 CDA09_20195 d1e611e9474df5eee30133b09b6f4ee2 503 Gene3D G3DSA:3.40.1080.20 343 483 1.8E-39 T 01-11-2018 IPR038460 Acetyl-CoA hydrolase/transferase, C-terminal domain superfamily CDA09_20195 d1e611e9474df5eee30133b09b6f4ee2 503 Pfam PF13336 Acetyl-CoA hydrolase/transferase C-terminal domain 334 470 3.7E-43 T 01-11-2018 IPR026888 Acetyl-CoA hydrolase/transferase C-terminal domain CDA09_20195 d1e611e9474df5eee30133b09b6f4ee2 503 Gene3D G3DSA:3.30.750.70 231 322 1.3E-5 T 01-11-2018 CDA09_20195 d1e611e9474df5eee30133b09b6f4ee2 503 Pfam PF02550 Acetyl-CoA hydrolase/transferase N-terminal domain 12 223 2.7E-29 T 01-11-2018 IPR003702 Acetyl-CoA hydrolase/transferase GO:0003824|GO:0006084 CDA09_20195 d1e611e9474df5eee30133b09b6f4ee2 503 SUPERFAMILY SSF100950 233 499 9.77E-82 T 01-11-2018 IPR037171 NagB/RpiA transferase-like CDA09_20195 d1e611e9474df5eee30133b09b6f4ee2 503 Gene3D G3DSA:3.40.1080.10 8 176 3.0E-14 T 01-11-2018 CDA09_20195 d1e611e9474df5eee30133b09b6f4ee2 503 SUPERFAMILY SSF100950 5 229 1.07E-73 T 01-11-2018 IPR037171 NagB/RpiA transferase-like CDA09_20195 d1e611e9474df5eee30133b09b6f4ee2 503 TIGRFAM TIGR03458 YgfH_subfam: succinate CoA transferase 12 498 2.8E-246 T 01-11-2018 IPR017821 Succinate CoA transferase GO:0006084|GO:0016740 CDA09_07400 eb254686ab51923acc6d74ebb49e5dc4 325 Gene3D G3DSA:2.130.10.10 105 269 1.6E-14 T 01-11-2018 IPR015943 WD40/YVTN repeat-like-containing domain superfamily GO:0005515 CDA09_07400 eb254686ab51923acc6d74ebb49e5dc4 325 Pfam PF14870 Photosynthesis system II assembly factor YCF48 157 259 1.7E-13 T 01-11-2018 IPR028203 Photosynthesis system II assembly factor Ycf48/Hcf136-like domain CDA09_07400 eb254686ab51923acc6d74ebb49e5dc4 325 SUPERFAMILY SSF110296 50 309 1.7E-31 T 01-11-2018 CDA09_20140 86bf9ae68ed4d0a0d4962364be6a1d1a 326 SUPERFAMILY SSF53790 2 255 8.9E-57 T 01-11-2018 IPR035996 Tetrapyrrole methylase superfamily GO:0008168 Reactome: R-HSA-5358493 CDA09_20140 86bf9ae68ed4d0a0d4962364be6a1d1a 326 Gene3D G3DSA:3.40.1010.10 1 121 3.6E-29 T 01-11-2018 IPR014777 Tetrapyrrole methylase, subdomain 1 GO:0008168 Reactome: R-HSA-5358493 CDA09_20140 86bf9ae68ed4d0a0d4962364be6a1d1a 326 TIGRFAM TIGR01466 cobJ_cbiH: precorrin-3B C17-methyltransferase 6 252 1.3E-95 T 01-11-2018 IPR006363 Precorrin-3B C17-methyltransferase domain GO:0008168|GO:0009236 CDA09_20140 86bf9ae68ed4d0a0d4962364be6a1d1a 326 Pfam PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases 5 219 4.7E-36 T 01-11-2018 IPR000878 Tetrapyrrole methylase GO:0008168 Reactome: R-HSA-5358493 CDA09_20140 86bf9ae68ed4d0a0d4962364be6a1d1a 326 Gene3D G3DSA:3.30.950.10 123 253 3.8E-53 T 01-11-2018 IPR014776 Tetrapyrrole methylase, subdomain 2 GO:0008168 Reactome: R-HSA-5358493 CDA09_20395 6b290c73ccb6a898c19b14775adcb1e5 352 Pfam PF16363 GDP-mannose 4,6 dehydratase 3 322 5.1E-99 T 01-11-2018 IPR016040 NAD(P)-binding domain CDA09_20395 6b290c73ccb6a898c19b14775adcb1e5 352 Gene3D G3DSA:3.90.25.10 200 330 4.5E-132 T 01-11-2018 CDA09_20395 6b290c73ccb6a898c19b14775adcb1e5 352 TIGRFAM TIGR01181 dTDP_gluc_dehyt: dTDP-glucose 4,6-dehydratase 2 334 3.5E-153 T 01-11-2018 IPR005888 dTDP-glucose 4,6-dehydratase GO:0008460|GO:0009225 KEGG: 00521+4.2.1.46|KEGG: 00523+4.2.1.46|KEGG: 00525+4.2.1.46|MetaCyc: PWY-3221|MetaCyc: PWY-6808|MetaCyc: PWY-6942|MetaCyc: PWY-6953|MetaCyc: PWY-6973|MetaCyc: PWY-6974|MetaCyc: PWY-6976|MetaCyc: PWY-7104|MetaCyc: PWY-7301|MetaCyc: PWY-7312|MetaCyc: PWY-7315|MetaCyc: PWY-7316|MetaCyc: PWY-7318|MetaCyc: PWY-7413|MetaCyc: PWY-7414|MetaCyc: PWY-7440|MetaCyc: PWY-7657|MetaCyc: PWY-7688|MetaCyc: PWY-7814 CDA09_20395 6b290c73ccb6a898c19b14775adcb1e5 352 Gene3D G3DSA:3.40.50.720 2 321 4.5E-132 T 01-11-2018 CDA09_20395 6b290c73ccb6a898c19b14775adcb1e5 352 SUPERFAMILY SSF51735 2 345 7.04E-91 T 01-11-2018 IPR036291 NAD(P)-binding domain superfamily CDA09_02555 5d0df188068a3dc174b56340565133cf 369 Pfam PF13692 Glycosyl transferases group 1 195 333 2.0E-26 T 01-11-2018 CDA09_02555 5d0df188068a3dc174b56340565133cf 369 Gene3D G3DSA:3.40.50.2000 185 353 2.6E-36 T 01-11-2018 CDA09_02555 5d0df188068a3dc174b56340565133cf 369 SUPERFAMILY SSF53756 2 364 8.7E-68 T 01-11-2018 CDA09_02555 5d0df188068a3dc174b56340565133cf 369 Gene3D G3DSA:3.40.50.2000 9 181 5.9E-16 T 01-11-2018 CDA09_02555 5d0df188068a3dc174b56340565133cf 369 Pfam PF13439 Glycosyltransferase Family 4 13 172 1.9E-15 T 01-11-2018 IPR028098 Glycosyltransferase subfamily 4-like, N-terminal domain Reactome: R-HSA-446193|Reactome: R-HSA-4549349 CDA09_16765 c4472f06ccee900dbe942620879f421a 541 TIGRFAM TIGR00552 nadE: NAD+ synthetase 268 516 3.4E-57 T 01-11-2018 IPR003694 NAD(+) synthetase GO:0003952|GO:0005524|GO:0009435 KEGG: 00760+6.3.1.5|Reactome: R-HSA-196807 CDA09_16765 c4472f06ccee900dbe942620879f421a 541 Gene3D G3DSA:3.40.50.620 263 541 7.6E-115 T 01-11-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold CDA09_16765 c4472f06ccee900dbe942620879f421a 541 Pfam PF00795 Carbon-nitrogen hydrolase 10 244 4.0E-22 T 01-11-2018 IPR003010 Carbon-nitrogen hydrolase GO:0006807 CDA09_16765 c4472f06ccee900dbe942620879f421a 541 SUPERFAMILY SSF56317 8 245 1.83E-60 T 01-11-2018 IPR036526 Carbon-nitrogen hydrolase superfamily CDA09_16765 c4472f06ccee900dbe942620879f421a 541 SUPERFAMILY SSF52402 255 523 1.19E-75 T 01-11-2018 CDA09_16765 c4472f06ccee900dbe942620879f421a 541 PIRSF PIRSF006630 5 252 2.5E-77 T 01-11-2018 IPR014445 Glutamine-dependent NAD(+) synthetase GO:0003952|GO:0005524|GO:0009435 KEGG: 00760+6.3.5.1|MetaCyc: PWY-5381|MetaCyc: PWY-5653|MetaCyc: PWY-7761|Reactome: R-HSA-196807 CDA09_16765 c4472f06ccee900dbe942620879f421a 541 PIRSF PIRSF006630 246 540 1.5E-114 T 01-11-2018 IPR014445 Glutamine-dependent NAD(+) synthetase GO:0003952|GO:0005524|GO:0009435 KEGG: 00760+6.3.5.1|MetaCyc: PWY-5381|MetaCyc: PWY-5653|MetaCyc: PWY-7761|Reactome: R-HSA-196807 CDA09_16765 c4472f06ccee900dbe942620879f421a 541 Pfam PF02540 NAD synthase 266 514 7.5E-71 T 01-11-2018 IPR022310 NAD/GMP synthase CDA09_16765 c4472f06ccee900dbe942620879f421a 541 Hamap MF_02090 Glutamine-dependent NAD(+) synthetase [nadE]. 8 539 29.141 T 01-11-2018 IPR014445 Glutamine-dependent NAD(+) synthetase GO:0003952|GO:0005524|GO:0009435 KEGG: 00760+6.3.5.1|MetaCyc: PWY-5381|MetaCyc: PWY-5653|MetaCyc: PWY-7761|Reactome: R-HSA-196807 CDA09_16765 c4472f06ccee900dbe942620879f421a 541 Gene3D G3DSA:3.60.110.10 3 255 4.8E-89 T 01-11-2018 IPR036526 Carbon-nitrogen hydrolase superfamily CDA09_10550 6afc48a6a3614a0231c82b1402fd2086 299 Gene3D G3DSA:3.40.190.10 90 290 1.8E-55 T 01-11-2018 CDA09_10550 6afc48a6a3614a0231c82b1402fd2086 299 Pfam PF03466 LysR substrate binding domain 96 294 4.8E-24 T 01-11-2018 IPR005119 LysR, substrate-binding CDA09_10550 6afc48a6a3614a0231c82b1402fd2086 299 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 32 42 1.0E-6 T 01-11-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 CDA09_10550 6afc48a6a3614a0231c82b1402fd2086 299 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 42 53 1.0E-6 T 01-11-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 CDA09_10550 6afc48a6a3614a0231c82b1402fd2086 299 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 21 32 1.0E-6 T 01-11-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 CDA09_10550 6afc48a6a3614a0231c82b1402fd2086 299 SUPERFAMILY SSF53850 88 294 3.8E-39 T 01-11-2018 CDA09_10550 6afc48a6a3614a0231c82b1402fd2086 299 Gene3D G3DSA:3.40.190.10 169 267 1.8E-55 T 01-11-2018 CDA09_10550 6afc48a6a3614a0231c82b1402fd2086 299 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 6 65 9.6E-19 T 01-11-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 CDA09_10550 6afc48a6a3614a0231c82b1402fd2086 299 SUPERFAMILY SSF46785 3 84 3.81E-21 T 01-11-2018 IPR036390 Winged helix DNA-binding domain superfamily CDA09_10550 6afc48a6a3614a0231c82b1402fd2086 299 Gene3D G3DSA:1.10.10.10 1 87 6.9E-28 T 01-11-2018 IPR036388 Winged helix-like DNA-binding domain superfamily CDA09_14220 ac62a8c7a5342259098e89b29d461621 293 Pfam PF11740 Plasmid replication region DNA-binding N-term 8 118 6.4E-19 T 01-11-2018 IPR021104 KfrA, N-terminal DNA-binding domain CDA09_05135 7286b2529994411838dcbc63d91611b4 251 TIGRFAM TIGR02476 BluB: 5,6-dimethylbenzimidazole synthase 14 218 2.9E-83 T 01-11-2018 IPR012825 5,6-dimethylbenzimidazole synthase BluB KEGG: 00740+1.13.11.79|MetaCyc: PWY-5523 CDA09_05135 7286b2529994411838dcbc63d91611b4 251 SUPERFAMILY SSF55469 22 229 5.1E-53 T 01-11-2018 IPR000415 Nitroreductase-like GO:0016491 Reactome: R-HSA-209968 CDA09_05135 7286b2529994411838dcbc63d91611b4 251 Pfam PF00881 Nitroreductase family 26 193 6.8E-30 T 01-11-2018 IPR029479 Nitroreductase Reactome: R-HSA-209968 CDA09_05135 7286b2529994411838dcbc63d91611b4 251 Gene3D G3DSA:3.40.109.10 2 196 1.3E-53 T 01-11-2018 IPR000415 Nitroreductase-like GO:0016491 Reactome: R-HSA-209968 CDA09_22845 77b485fbc626e219bad41f49b675d7a7 224 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 167 184 2.9E-13 T 01-11-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CDA09_22845 77b485fbc626e219bad41f49b675d7a7 224 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 71 82 2.9E-13 T 01-11-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CDA09_22845 77b485fbc626e219bad41f49b675d7a7 224 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 146 165 2.9E-13 T 01-11-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CDA09_22845 77b485fbc626e219bad41f49b675d7a7 224 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 4 21 2.9E-13 T 01-11-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CDA09_22845 77b485fbc626e219bad41f49b675d7a7 224 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 9 186 4.0E-25 T 01-11-2018 CDA09_22845 77b485fbc626e219bad41f49b675d7a7 224 SUPERFAMILY SSF51735 3 224 8.67E-58 T 01-11-2018 IPR036291 NAD(P)-binding domain superfamily CDA09_22845 77b485fbc626e219bad41f49b675d7a7 224 Gene3D G3DSA:3.40.50.720 1 224 1.9E-56 T 01-11-2018 CDA09_08140 43dda8e77620db9ae34e21cef0f6e9d7 948 Pfam PF08264 Anticodon-binding domain of tRNA 676 824 2.9E-41 T 01-11-2018 IPR013155 Methionyl/Valyl/Leucyl/Isoleucyl-tRNA synthetase, anticodon-binding GO:0004812|GO:0006418 CDA09_08140 43dda8e77620db9ae34e21cef0f6e9d7 948 Gene3D G3DSA:3.40.50.620 341 578 1.2E-60 T 01-11-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold CDA09_08140 43dda8e77620db9ae34e21cef0f6e9d7 948 SUPERFAMILY SSF52374 3 634 7.3E-135 T 01-11-2018 CDA09_08140 43dda8e77620db9ae34e21cef0f6e9d7 948 SUPERFAMILY SSF46589 881 945 4.24E-16 T 01-11-2018 IPR010978 Class I and II aminoacyl-tRNA synthetase, tRNA-binding arm GO:0000166 CDA09_08140 43dda8e77620db9ae34e21cef0f6e9d7 948 Pfam PF10458 Valyl tRNA synthetase tRNA binding arm 881 945 9.0E-19 T 01-11-2018 IPR019499 Valyl-tRNA synthetase, tRNA-binding arm GO:0000166|GO:0004832|GO:0005524|GO:0005737|GO:0006438 KEGG: 00970+6.1.1.9 CDA09_08140 43dda8e77620db9ae34e21cef0f6e9d7 948 Hamap MF_02004 Valine--tRNA ligase [valS]. 3 946 15.75 T 01-11-2018 IPR002303 Valine-tRNA ligase GO:0000166|GO:0004832|GO:0005524|GO:0006438 KEGG: 00970+6.1.1.9 CDA09_08140 43dda8e77620db9ae34e21cef0f6e9d7 948 Gene3D G3DSA:3.40.50.620 4 198 2.4E-63 T 01-11-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold CDA09_08140 43dda8e77620db9ae34e21cef0f6e9d7 948 Gene3D G3DSA:1.10.730.10 579 820 1.3E-70 T 01-11-2018 CDA09_08140 43dda8e77620db9ae34e21cef0f6e9d7 948 ProSitePatterns PS00178 Aminoacyl-transfer RNA synthetases class-I signature. 45 56 - T 01-11-2018 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site GO:0000166|GO:0004812|GO:0005524|GO:0006418 CDA09_08140 43dda8e77620db9ae34e21cef0f6e9d7 948 SUPERFAMILY SSF50677 193 348 6.67E-61 T 01-11-2018 IPR009008 Valyl/Leucyl/Isoleucyl-tRNA synthetase, editing domain GO:0002161|GO:0006418 CDA09_08140 43dda8e77620db9ae34e21cef0f6e9d7 948 Gene3D G3DSA:3.90.740.10 199 340 2.4E-50 T 01-11-2018 IPR009008 Valyl/Leucyl/Isoleucyl-tRNA synthetase, editing domain GO:0002161|GO:0006418 CDA09_08140 43dda8e77620db9ae34e21cef0f6e9d7 948 SUPERFAMILY SSF47323 635 896 9.35E-64 T 01-11-2018 IPR009080 Aminoacyl-tRNA synthetase, class Ia, anticodon-binding GO:0000166|GO:0004812|GO:0005524|GO:0006418 CDA09_08140 43dda8e77620db9ae34e21cef0f6e9d7 948 Pfam PF00133 tRNA synthetases class I (I, L, M and V) 16 624 4.4E-200 T 01-11-2018 IPR002300 Aminoacyl-tRNA synthetase, class Ia GO:0000166|GO:0004812|GO:0005524|GO:0006418 CDA09_08140 43dda8e77620db9ae34e21cef0f6e9d7 948 PRINTS PR00986 Valyl-tRNA synthetase signature 236 253 3.3E-35 T 01-11-2018 IPR002303 Valine-tRNA ligase GO:0000166|GO:0004832|GO:0005524|GO:0006438 KEGG: 00970+6.1.1.9 CDA09_08140 43dda8e77620db9ae34e21cef0f6e9d7 948 PRINTS PR00986 Valyl-tRNA synthetase signature 38 49 3.3E-35 T 01-11-2018 IPR002303 Valine-tRNA ligase GO:0000166|GO:0004832|GO:0005524|GO:0006438 KEGG: 00970+6.1.1.9 CDA09_08140 43dda8e77620db9ae34e21cef0f6e9d7 948 PRINTS PR00986 Valyl-tRNA synthetase signature 352 365 3.3E-35 T 01-11-2018 IPR002303 Valine-tRNA ligase GO:0000166|GO:0004832|GO:0005524|GO:0006438 KEGG: 00970+6.1.1.9 CDA09_08140 43dda8e77620db9ae34e21cef0f6e9d7 948 PRINTS PR00986 Valyl-tRNA synthetase signature 499 517 3.3E-35 T 01-11-2018 IPR002303 Valine-tRNA ligase GO:0000166|GO:0004832|GO:0005524|GO:0006438 KEGG: 00970+6.1.1.9 CDA09_08140 43dda8e77620db9ae34e21cef0f6e9d7 948 PRINTS PR00986 Valyl-tRNA synthetase signature 463 484 3.3E-35 T 01-11-2018 IPR002303 Valine-tRNA ligase GO:0000166|GO:0004832|GO:0005524|GO:0006438 KEGG: 00970+6.1.1.9 CDA09_08140 43dda8e77620db9ae34e21cef0f6e9d7 948 Gene3D G3DSA:1.10.287.380 875 946 4.5E-15 T 01-11-2018 IPR037118 Valyl-tRNA synthetase, tRNA-binding arm superfamily GO:0000166|GO:0004832|GO:0005524|GO:0005737|GO:0006438 KEGG: 00970+6.1.1.9|Reactome: R-HSA-379716 CDA09_08140 43dda8e77620db9ae34e21cef0f6e9d7 948 TIGRFAM TIGR00422 valS: valine--tRNA ligase 4 928 0.0 T 01-11-2018 IPR002303 Valine-tRNA ligase GO:0000166|GO:0004832|GO:0005524|GO:0006438 KEGG: 00970+6.1.1.9 CDA09_12215 0920da534d7bde3718302b89ab689eaf 203 SUPERFAMILY SSF143555 32 66 1.7E-5 T 01-11-2018 CDA09_08325 ebbcb7c4754d4d04f76072bd96124362 363 SUPERFAMILY SSF52402 26 223 5.51E-52 T 01-11-2018 CDA09_08325 ebbcb7c4754d4d04f76072bd96124362 363 Gene3D G3DSA:3.40.50.1220 228 362 3.1E-53 T 01-11-2018 CDA09_08325 ebbcb7c4754d4d04f76072bd96124362 363 PIRSF PIRSF000089 24 357 1.2E-113 T 01-11-2018 IPR001308 Electron transfer flavoprotein alpha subunit/FixB GO:0009055|GO:0050660 Reactome: R-HSA-611105 CDA09_08325 ebbcb7c4754d4d04f76072bd96124362 363 SMART SM00893 28 220 9.3E-45 T 01-11-2018 IPR014730 Electron transfer flavoprotein, alpha/beta-subunit, N-terminal Reactome: R-HSA-611105 CDA09_08325 ebbcb7c4754d4d04f76072bd96124362 363 Gene3D G3DSA:3.40.50.620 21 222 4.8E-65 T 01-11-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold CDA09_08325 ebbcb7c4754d4d04f76072bd96124362 363 Pfam PF01012 Electron transfer flavoprotein domain 28 208 2.9E-43 T 01-11-2018 IPR014730 Electron transfer flavoprotein, alpha/beta-subunit, N-terminal Reactome: R-HSA-611105 CDA09_08325 ebbcb7c4754d4d04f76072bd96124362 363 SUPERFAMILY SSF52467 232 351 4.91E-47 T 01-11-2018 IPR029035 DHS-like NAD/FAD-binding domain superfamily CDA09_08325 ebbcb7c4754d4d04f76072bd96124362 363 ProSitePatterns PS00696 Electron transfer flavoprotein alpha-subunit signature. 296 322 - T 01-11-2018 IPR018206 Electron transfer flavoprotein subunit alpha, conserved site Reactome: R-HSA-611105 CDA09_08325 ebbcb7c4754d4d04f76072bd96124362 363 Pfam PF00766 Electron transfer flavoprotein FAD-binding domain 233 314 1.4E-35 T 01-11-2018 IPR014731 Electron transfer flavoprotein, alpha subunit, C-terminal Reactome: R-HSA-611105 CDA09_11555 acdd2ec65f835534d876e38492b0ce4e 216 ProSitePatterns PS00860 GTP cyclohydrolase I signature 2. 133 143 - T 01-11-2018 IPR018234 GTP cyclohydrolase I, conserved site GO:0003934|GO:0005737|GO:0046654 KEGG: 00790+3.5.4.16|MetaCyc: PWY-5663|MetaCyc: PWY-5664|MetaCyc: PWY-6147|MetaCyc: PWY-6703|MetaCyc: PWY-6983|MetaCyc: PWY-7442|MetaCyc: PWY-7852|Reactome: R-HSA-1474151 CDA09_11555 acdd2ec65f835534d876e38492b0ce4e 216 ProSitePatterns PS00859 GTP cyclohydrolase I signature 1. 85 101 - T 01-11-2018 IPR018234 GTP cyclohydrolase I, conserved site GO:0003934|GO:0005737|GO:0046654 KEGG: 00790+3.5.4.16|MetaCyc: PWY-5663|MetaCyc: PWY-5664|MetaCyc: PWY-6147|MetaCyc: PWY-6703|MetaCyc: PWY-6983|MetaCyc: PWY-7442|MetaCyc: PWY-7852|Reactome: R-HSA-1474151 CDA09_11555 acdd2ec65f835534d876e38492b0ce4e 216 Pfam PF01227 GTP cyclohydrolase I 28 205 7.4E-77 T 01-11-2018 IPR020602 GTP cyclohydrolase I domain KEGG: 00790+3.5.4.16|MetaCyc: PWY-5663|MetaCyc: PWY-5664|MetaCyc: PWY-6147|MetaCyc: PWY-6703|MetaCyc: PWY-6983|MetaCyc: PWY-7442|MetaCyc: PWY-7852|Reactome: R-HSA-1474151 CDA09_11555 acdd2ec65f835534d876e38492b0ce4e 216 Hamap MF_00223 GTP cyclohydrolase 1 [folE]. 23 206 40.345 T 01-11-2018 IPR001474 GTP cyclohydrolase I GO:0003934|GO:0005737|GO:0046654 KEGG: 00790+3.5.4.16|MetaCyc: PWY-5663|MetaCyc: PWY-5664|MetaCyc: PWY-6147|MetaCyc: PWY-6703|MetaCyc: PWY-6983|MetaCyc: PWY-7442|MetaCyc: PWY-7852|Reactome: R-HSA-1474151 CDA09_11555 acdd2ec65f835534d876e38492b0ce4e 216 Gene3D G3DSA:1.10.286.10 10 71 3.6E-20 T 01-11-2018 CDA09_11555 acdd2ec65f835534d876e38492b0ce4e 216 SUPERFAMILY SSF55620 17 206 2.15E-78 T 01-11-2018 CDA09_11555 acdd2ec65f835534d876e38492b0ce4e 216 Gene3D G3DSA:3.30.1130.10 75 207 1.4E-55 T 01-11-2018 CDA09_11555 acdd2ec65f835534d876e38492b0ce4e 216 TIGRFAM TIGR00063 folE: GTP cyclohydrolase I 29 205 1.3E-67 T 01-11-2018 IPR001474 GTP cyclohydrolase I GO:0003934|GO:0005737|GO:0046654 KEGG: 00790+3.5.4.16|MetaCyc: PWY-5663|MetaCyc: PWY-5664|MetaCyc: PWY-6147|MetaCyc: PWY-6703|MetaCyc: PWY-6983|MetaCyc: PWY-7442|MetaCyc: PWY-7852|Reactome: R-HSA-1474151 CDA09_19320 52d5747142356743cf4cf24e222a4a55 215 ProSitePatterns PS01274 Coenzyme A transferases signature 2. 44 52 - T 01-11-2018 IPR004164 Coenzyme A transferase active site GO:0008410 Reactome: R-HSA-77108 CDA09_19320 52d5747142356743cf4cf24e222a4a55 215 SUPERFAMILY SSF100950 3 211 3.1E-76 T 01-11-2018 IPR037171 NagB/RpiA transferase-like CDA09_19320 52d5747142356743cf4cf24e222a4a55 215 TIGRFAM TIGR02428 pcaJ_scoB_fam: 3-oxoacid CoA-transferase, B subunit 3 207 2.1E-100 T 01-11-2018 IPR012791 3-oxoacid CoA-transferase, subunit B GO:0008410 Reactome: R-HSA-77108 CDA09_19320 52d5747142356743cf4cf24e222a4a55 215 Pfam PF01144 Coenzyme A transferase 7 199 9.1E-43 T 01-11-2018 IPR004165 Coenzyme A transferase family I GO:0008410 Reactome: R-HSA-77108 CDA09_19320 52d5747142356743cf4cf24e222a4a55 215 SMART SM00882 6 202 1.1E-83 T 01-11-2018 IPR004165 Coenzyme A transferase family I GO:0008410 Reactome: R-HSA-77108 CDA09_19320 52d5747142356743cf4cf24e222a4a55 215 Gene3D G3DSA:3.40.1080.10 2 212 3.8E-103 T 01-11-2018 CDA09_18315 5ce16f07c12f9089f1cc6eceecaa2580 156 Pfam PF05433 Glycine zipper 2TM domain 67 104 8.0E-8 T 01-11-2018 IPR008816 Glycine zipper 2TM domain GO:0019867 CDA09_11590 811d474988dd07673aa796df98b88e36 683 Gene3D G3DSA:3.40.50.920 552 683 8.1E-41 T 01-11-2018 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II GO:0003824 CDA09_11590 811d474988dd07673aa796df98b88e36 683 ProSitePatterns PS00802 Transketolase signature 2. 480 496 - T 01-11-2018 IPR020826 Transketolase binding site KEGG: 00730+2.2.1.7|KEGG: 00900+2.2.1.7|MetaCyc: PWY-6891|MetaCyc: PWY-6892|MetaCyc: PWY-7560 CDA09_11590 811d474988dd07673aa796df98b88e36 683 SUPERFAMILY SSF52518 15 342 5.12E-118 T 01-11-2018 IPR029061 Thiamin diphosphate-binding fold CDA09_11590 811d474988dd07673aa796df98b88e36 683 TIGRFAM TIGR00232 tktlase_bact: transketolase 16 681 3.4E-270 T 01-11-2018 IPR005478 Transketolase, bacterial-like GO:0004802 KEGG: 00030+2.2.1.1|KEGG: 00710+2.2.1.1|MetaCyc: PWY-1861|MetaCyc: PWY-5723|MetaCyc: PWY-6901 CDA09_11590 811d474988dd07673aa796df98b88e36 683 Gene3D G3DSA:3.40.50.970 340 550 7.0E-82 T 01-11-2018 CDA09_11590 811d474988dd07673aa796df98b88e36 683 Pfam PF02780 Transketolase, C-terminal domain 558 673 1.3E-12 T 01-11-2018 IPR033248 Transketolase, C-terminal domain CDA09_11590 811d474988dd07673aa796df98b88e36 683 SUPERFAMILY SSF52922 547 682 2.49E-41 T 01-11-2018 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II GO:0003824 CDA09_11590 811d474988dd07673aa796df98b88e36 683 Gene3D G3DSA:3.40.50.970 14 339 1.4E-128 T 01-11-2018 CDA09_11590 811d474988dd07673aa796df98b88e36 683 Pfam PF00456 Transketolase, thiamine diphosphate binding domain 14 347 4.1E-152 T 01-11-2018 IPR005474 Transketolase, N-terminal KEGG: 00730+2.2.1.7|KEGG: 00900+2.2.1.7|MetaCyc: PWY-6891|MetaCyc: PWY-6892|MetaCyc: PWY-7560 CDA09_11590 811d474988dd07673aa796df98b88e36 683 SMART SM00861 368 539 1.2E-71 T 01-11-2018 IPR005475 Transketolase-like, pyrimidine-binding domain CDA09_11590 811d474988dd07673aa796df98b88e36 683 Pfam PF02779 Transketolase, pyrimidine binding domain 367 538 2.9E-48 T 01-11-2018 IPR005475 Transketolase-like, pyrimidine-binding domain CDA09_11590 811d474988dd07673aa796df98b88e36 683 ProSitePatterns PS00801 Transketolase signature 1. 22 42 - T 01-11-2018 IPR005474 Transketolase, N-terminal KEGG: 00730+2.2.1.7|KEGG: 00900+2.2.1.7|MetaCyc: PWY-6891|MetaCyc: PWY-6892|MetaCyc: PWY-7560 CDA09_11590 811d474988dd07673aa796df98b88e36 683 SUPERFAMILY SSF52518 351 538 1.23E-65 T 01-11-2018 IPR029061 Thiamin diphosphate-binding fold CDA09_18775 1efb4e34a2ad4e184644a4432623df13 346 TIGRFAM TIGR01420 pilT_fam: twitching motility protein 3 343 2.8E-155 T 01-11-2018 IPR006321 Pilus retraction protein PilT GO:0005524 CDA09_18775 1efb4e34a2ad4e184644a4432623df13 346 ProSitePatterns PS00662 Bacterial type II secretion system protein E signature. 193 207 - T 01-11-2018 IPR001482 Type II/IV secretion system protein CDA09_18775 1efb4e34a2ad4e184644a4432623df13 346 SUPERFAMILY SSF52540 5 335 2.87E-76 T 01-11-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CDA09_18775 1efb4e34a2ad4e184644a4432623df13 346 Pfam PF00437 Type II/IV secretion system protein 12 265 2.4E-45 T 01-11-2018 IPR001482 Type II/IV secretion system protein CDA09_18775 1efb4e34a2ad4e184644a4432623df13 346 Gene3D G3DSA:3.40.50.300 101 346 8.1E-104 T 01-11-2018 CDA09_18775 1efb4e34a2ad4e184644a4432623df13 346 Gene3D G3DSA:3.30.450.90 1 100 4.7E-37 T 01-11-2018 CDA09_18775 1efb4e34a2ad4e184644a4432623df13 346 SMART SM00382 122 256 3.4E-4 T 01-11-2018 IPR003593 AAA+ ATPase domain CDA09_03460 7240962cc30f337b0f86b85e2d45b9b1 424 SUPERFAMILY SSF55424 357 423 3.02E-17 T 01-11-2018 IPR016156 FAD/NAD-linked reductase, dimerisation domain superfamily GO:0016491|GO:0050660|GO:0055114 CDA09_03460 7240962cc30f337b0f86b85e2d45b9b1 424 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 35 153 1.7E-11 T 01-11-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 CDA09_03460 7240962cc30f337b0f86b85e2d45b9b1 424 SUPERFAMILY SSF51905 35 352 5.71E-27 T 01-11-2018 IPR036188 FAD/NAD(P)-binding domain superfamily CDA09_03460 7240962cc30f337b0f86b85e2d45b9b1 424 Gene3D G3DSA:3.50.50.60 150 280 9.8E-93 T 01-11-2018 IPR036188 FAD/NAD(P)-binding domain superfamily CDA09_03460 7240962cc30f337b0f86b85e2d45b9b1 424 Gene3D G3DSA:3.90.760.10 356 423 4.5E-9 T 01-11-2018 IPR037092 Flavocytochrome c sulphide dehydrogenase, flavin-binding domain superfamily GO:0016491|GO:0050660|GO:0055114 KEGG: 00920+1.8.2.3|MetaCyc: PWY-5274 CDA09_03460 7240962cc30f337b0f86b85e2d45b9b1 424 Gene3D G3DSA:3.50.50.60 36 344 9.8E-93 T 01-11-2018 IPR036188 FAD/NAD(P)-binding domain superfamily CDA09_03460 7240962cc30f337b0f86b85e2d45b9b1 424 Pfam PF09242 Flavocytochrome c sulphide dehydrogenase, flavin-binding 358 423 4.0E-20 T 01-11-2018 IPR015323 Flavocytochrome c sulphide dehydrogenase, flavin-binding GO:0016491|GO:0050660|GO:0055114 KEGG: 00920+1.8.2.3|MetaCyc: PWY-5274 CDA09_03460 7240962cc30f337b0f86b85e2d45b9b1 424 SUPERFAMILY SSF51905 153 280 9.19E-32 T 01-11-2018 IPR036188 FAD/NAD(P)-binding domain superfamily CDA09_03455 4a5bfd3f74c4808d377bffead349c77d 141 PRINTS PR00502 NUDIX hydrolase family signature 49 64 1.2E-5 T 01-11-2018 IPR020476 NUDIX hydrolase Reactome: R-HSA-2393930 CDA09_03455 4a5bfd3f74c4808d377bffead349c77d 141 PRINTS PR00502 NUDIX hydrolase family signature 35 49 1.2E-5 T 01-11-2018 IPR020476 NUDIX hydrolase Reactome: R-HSA-2393930 CDA09_03455 4a5bfd3f74c4808d377bffead349c77d 141 Gene3D G3DSA:3.90.79.10 7 130 2.8E-30 T 01-11-2018 CDA09_03455 4a5bfd3f74c4808d377bffead349c77d 141 ProSitePatterns PS00893 Nudix box signature. 40 61 - T 01-11-2018 IPR020084 NUDIX hydrolase, conserved site GO:0016787 CDA09_03455 4a5bfd3f74c4808d377bffead349c77d 141 Pfam PF00293 NUDIX domain 9 120 8.7E-20 T 01-11-2018 IPR000086 NUDIX hydrolase domain GO:0016787 CDA09_03455 4a5bfd3f74c4808d377bffead349c77d 141 SUPERFAMILY SSF55811 9 118 5.15E-28 T 01-11-2018 IPR015797 NUDIX hydrolase-like domain superfamily GO:0016787 CDA09_14280 899e81916c9a7a60b891e601813037d1 309 TIGRFAM TIGR00431 TruB: tRNA pseudouridine(55) synthase 15 214 1.2E-77 T 01-11-2018 IPR014780 tRNA pseudouridine synthase II, TruB GO:0001522|GO:0003723|GO:0009451|GO:0009982 CDA09_14280 899e81916c9a7a60b891e601813037d1 309 SUPERFAMILY SSF55120 14 244 2.88E-81 T 01-11-2018 IPR020103 Pseudouridine synthase, catalytic domain superfamily GO:0001522|GO:0003723|GO:0009451|GO:0009982 CDA09_14280 899e81916c9a7a60b891e601813037d1 309 Pfam PF16198 tRNA pseudouridylate synthase B C-terminal domain 184 242 4.0E-14 T 01-11-2018 IPR032819 tRNA pseudouridylate synthase B, C-terminal Reactome: R-HSA-171319|Reactome: R-HSA-6790901 CDA09_14280 899e81916c9a7a60b891e601813037d1 309 Gene3D G3DSA:2.30.130.10 248 303 3.3E-11 T 01-11-2018 IPR036974 PUA domain superfamily GO:0003723 CDA09_14280 899e81916c9a7a60b891e601813037d1 309 Pfam PF09157 Pseudouridine synthase II TruB, C-terminal 246 300 1.8E-15 T 01-11-2018 IPR015240 tRNA pseudouridine synthase II, TruB, subfamily 1, C-terminal GO:0001522|GO:0003723|GO:0009451|GO:0009982 CDA09_14280 899e81916c9a7a60b891e601813037d1 309 Pfam PF01509 TruB family pseudouridylate synthase (N terminal domain) 36 183 2.9E-57 T 01-11-2018 IPR002501 Pseudouridine synthase II, N-terminal GO:0006396 CDA09_14280 899e81916c9a7a60b891e601813037d1 309 Hamap MF_01080 tRNA pseudouridine synthase B [truB]. 14 300 19.375 T 01-11-2018 IPR014780 tRNA pseudouridine synthase II, TruB GO:0001522|GO:0003723|GO:0009451|GO:0009982 CDA09_14280 899e81916c9a7a60b891e601813037d1 309 SUPERFAMILY SSF88697 245 301 4.52E-9 T 01-11-2018 IPR015947 PUA-like superfamily CDA09_14280 899e81916c9a7a60b891e601813037d1 309 Gene3D G3DSA:3.30.2350.10 4 247 3.0E-91 T 01-11-2018 CDA09_11775 0fa115733287ac6a9638498b3494c857 260 SUPERFAMILY SSF52096 1 257 1.13E-76 T 01-11-2018 IPR029045 ClpP/crotonase-like domain superfamily CDA09_11775 0fa115733287ac6a9638498b3494c857 260 Gene3D G3DSA:3.90.226.10 1 199 1.3E-69 T 01-11-2018 CDA09_11775 0fa115733287ac6a9638498b3494c857 260 TIGRFAM TIGR03210 badI: 2-ketocyclohexanecarboxyl-CoA hydrolase 3 258 7.9E-159 T 01-11-2018 IPR017623 2-ketocyclohexanecarboxyl-CoA hydrolase CDA09_11775 0fa115733287ac6a9638498b3494c857 260 Pfam PF00378 Enoyl-CoA hydratase/isomerase 10 256 1.4E-72 T 01-11-2018 IPR001753 Enoyl-CoA hydratase/isomerase GO:0003824 CDA09_11775 0fa115733287ac6a9638498b3494c857 260 ProSitePatterns PS00166 Enoyl-CoA hydratase/isomerase signature. 100 120 - T 01-11-2018 IPR018376 Enoyl-CoA hydratase/isomerase, conserved site GO:0003824 CDA09_11775 0fa115733287ac6a9638498b3494c857 260 Hamap MF_01934 1,4-dihydroxy-2-naphthoyl-CoA synthase [menB]. 1 260 43.412 T 01-11-2018 IPR010198 1,4-Dihydroxy-2-naphthoyl-CoA synthase, MenB GO:0008935|GO:0009234 KEGG: 00130+4.1.3.36|MetaCyc: PWY-5837 CDA09_11775 0fa115733287ac6a9638498b3494c857 260 Gene3D G3DSA:1.10.12.10 200 250 3.2E-22 T 01-11-2018 IPR014748 Enoyl-CoA hydratase, C-terminal CDA09_10370 7a29923bfb7b4f0024fe911d27c87273 93 PRINTS PR01590 FIS bacterial regulatory protein HTH signature 71 91 4.8E-7 T 01-11-2018 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 CDA09_10370 7a29923bfb7b4f0024fe911d27c87273 93 PRINTS PR01590 FIS bacterial regulatory protein HTH signature 54 71 4.8E-7 T 01-11-2018 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 CDA09_10370 7a29923bfb7b4f0024fe911d27c87273 93 SUPERFAMILY SSF46689 41 87 1.08E-7 T 01-11-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 CDA09_10370 7a29923bfb7b4f0024fe911d27c87273 93 Pfam PF02954 Bacterial regulatory protein, Fis family 49 87 5.8E-12 T 01-11-2018 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 CDA09_10370 7a29923bfb7b4f0024fe911d27c87273 93 Gene3D G3DSA:1.10.10.60 28 88 1.6E-9 T 01-11-2018 CDA09_10900 902f141b98239c9ea8f34f9f8e8cc677 687 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 394 413 2.1E-5 T 01-11-2018 CDA09_10900 902f141b98239c9ea8f34f9f8e8cc677 687 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 609 625 2.1E-5 T 01-11-2018 CDA09_10900 902f141b98239c9ea8f34f9f8e8cc677 687 SUPERFAMILY SSF51395 4 370 3.66E-103 T 01-11-2018 CDA09_10900 902f141b98239c9ea8f34f9f8e8cc677 687 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 661 668 2.6E-7 T 01-11-2018 CDA09_10900 902f141b98239c9ea8f34f9f8e8cc677 687 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 610 624 2.6E-7 T 01-11-2018 CDA09_10900 902f141b98239c9ea8f34f9f8e8cc677 687 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 393 415 2.6E-7 T 01-11-2018 CDA09_10900 902f141b98239c9ea8f34f9f8e8cc677 687 Gene3D G3DSA:3.40.50.720 393 680 2.5E-64 T 01-11-2018 CDA09_10900 902f141b98239c9ea8f34f9f8e8cc677 687 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 393 639 3.1E-11 T 01-11-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 CDA09_10900 902f141b98239c9ea8f34f9f8e8cc677 687 Pfam PF00724 NADH:flavin oxidoreductase / NADH oxidase family 7 344 1.8E-69 T 01-11-2018 IPR001155 NADH:flavin oxidoreductase/NADH oxidase, N-terminal GO:0010181|GO:0016491|GO:0055114 CDA09_10900 902f141b98239c9ea8f34f9f8e8cc677 687 Gene3D G3DSA:3.20.20.70 1 382 1.9E-114 T 01-11-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 CDA09_10900 902f141b98239c9ea8f34f9f8e8cc677 687 SUPERFAMILY SSF51905 382 684 1.68E-31 T 01-11-2018 IPR036188 FAD/NAD(P)-binding domain superfamily CDA09_10900 902f141b98239c9ea8f34f9f8e8cc677 687 Gene3D G3DSA:3.50.50.60 488 617 2.5E-64 T 01-11-2018 IPR036188 FAD/NAD(P)-binding domain superfamily CDA09_12395 003b7a84e491dcf26a19bb65b1cd1072 182 Gene3D G3DSA:2.160.10.10 1 173 1.6E-64 T 01-11-2018 CDA09_12395 003b7a84e491dcf26a19bb65b1cd1072 182 SUPERFAMILY SSF51161 3 167 1.15E-49 T 01-11-2018 IPR011004 Trimeric LpxA-like superfamily CDA09_12395 003b7a84e491dcf26a19bb65b1cd1072 182 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 88 121 4.1E-10 T 01-11-2018 IPR001451 Hexapeptide repeat CDA09_12395 003b7a84e491dcf26a19bb65b1cd1072 182 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 14 45 3.2E-4 T 01-11-2018 IPR001451 Hexapeptide repeat CDA09_10905 9c6bb6f7c862b39c78a53d1d38f0a4a3 655 Pfam PF11982 Domain of unknown function (DUF3483) 4 220 3.2E-90 T 01-11-2018 IPR021872 Protein of unknown function DUF3483 CDA09_10905 9c6bb6f7c862b39c78a53d1d38f0a4a3 655 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 326 337 - T 01-11-2018 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site CDA09_10905 9c6bb6f7c862b39c78a53d1d38f0a4a3 655 Pfam PF02754 Cysteine-rich domain 413 484 0.054 T 01-11-2018 IPR004017 Cysteine-rich domain CDA09_10905 9c6bb6f7c862b39c78a53d1d38f0a4a3 655 Pfam PF02754 Cysteine-rich domain 528 614 5.3E-14 T 01-11-2018 IPR004017 Cysteine-rich domain CDA09_10905 9c6bb6f7c862b39c78a53d1d38f0a4a3 655 SUPERFAMILY SSF46548 224 358 6.1E-20 T 01-11-2018 IPR009051 Alpha-helical ferredoxin GO:0051536 CDA09_10905 9c6bb6f7c862b39c78a53d1d38f0a4a3 655 Pfam PF13183 4Fe-4S dicluster domain 242 339 1.3E-12 T 01-11-2018 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain CDA09_03340 83c49d4a5e4f4b5ac9d29652c11ac4ee 170 Gene3D G3DSA:3.40.50.300 12 163 1.9E-41 T 01-11-2018 CDA09_03340 83c49d4a5e4f4b5ac9d29652c11ac4ee 170 SUPERFAMILY SSF52540 34 139 2.08E-21 T 01-11-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CDA09_03340 83c49d4a5e4f4b5ac9d29652c11ac4ee 170 Pfam PF02367 Threonylcarbamoyl adenosine biosynthesis protein TsaE 19 139 6.7E-36 T 01-11-2018 IPR003442 tRNA threonylcarbamoyl adenosine modification protein TsaE GO:0002949 CDA09_03340 83c49d4a5e4f4b5ac9d29652c11ac4ee 170 TIGRFAM TIGR00150 T6A_YjeE: tRNA threonylcarbamoyl adenosine modification protein YjeE 19 149 2.9E-40 T 01-11-2018 IPR003442 tRNA threonylcarbamoyl adenosine modification protein TsaE GO:0002949 CDA09_17860 3fd1ec0d096ed6381bf42867385d6a14 1193 SUPERFAMILY SSF52518 441 629 4.5E-16 T 01-11-2018 IPR029061 Thiamin diphosphate-binding fold CDA09_17860 3fd1ec0d096ed6381bf42867385d6a14 1193 Pfam PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain 461 548 8.8E-7 T 01-11-2018 IPR011766 Thiamine pyrophosphate enzyme, C-terminal TPP-binding GO:0003824|GO:0030976 CDA09_17860 3fd1ec0d096ed6381bf42867385d6a14 1193 SUPERFAMILY SSF52518 20 243 7.65E-20 T 01-11-2018 IPR029061 Thiamin diphosphate-binding fold CDA09_17860 3fd1ec0d096ed6381bf42867385d6a14 1193 Gene3D G3DSA:3.40.920.10 724 940 6.7E-19 T 01-11-2018 IPR002869 Pyruvate-flavodoxin oxidoreductase, central domain GO:0016491|GO:0055114 CDA09_17860 3fd1ec0d096ed6381bf42867385d6a14 1193 Gene3D G3DSA:3.40.50.970 12 224 7.0E-26 T 01-11-2018 CDA09_17860 3fd1ec0d096ed6381bf42867385d6a14 1193 Pfam PF01558 Pyruvate ferredoxin/flavodoxin oxidoreductase 735 935 1.4E-24 T 01-11-2018 IPR019752 Pyruvate/ketoisovalerate oxidoreductase, catalytic domain GO:0016903|GO:0055114 CDA09_17860 3fd1ec0d096ed6381bf42867385d6a14 1193 SUPERFAMILY SSF53323 727 985 1.7E-29 T 01-11-2018 IPR002869 Pyruvate-flavodoxin oxidoreductase, central domain GO:0016491|GO:0055114 CDA09_17860 3fd1ec0d096ed6381bf42867385d6a14 1193 SUPERFAMILY SSF52922 269 401 5.76E-8 T 01-11-2018 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II GO:0003824 CDA09_18345 56bd423d0c5a8a136763908527fc3ccd 632 SUPERFAMILY SSF51735 277 547 8.0E-57 T 01-11-2018 IPR036291 NAD(P)-binding domain superfamily CDA09_18345 56bd423d0c5a8a136763908527fc3ccd 632 Gene3D G3DSA:3.40.50.720 279 581 2.4E-115 T 01-11-2018 CDA09_18345 56bd423d0c5a8a136763908527fc3ccd 632 Gene3D G3DSA:3.40.50.720 141 264 5.2E-30 T 01-11-2018 CDA09_18345 56bd423d0c5a8a136763908527fc3ccd 632 Pfam PF02719 Polysaccharide biosynthesis protein 283 566 3.0E-119 T 01-11-2018 IPR003869 Polysaccharide biosynthesis protein, CapD-like domain CDA09_18345 56bd423d0c5a8a136763908527fc3ccd 632 SUPERFAMILY SSF51735 143 270 5.51E-18 T 01-11-2018 IPR036291 NAD(P)-binding domain superfamily CDA09_18345 56bd423d0c5a8a136763908527fc3ccd 632 Pfam PF13727 CoA-binding domain 60 223 3.5E-11 T 01-11-2018 CDA09_16480 79bb53362374cf89544640d6e55f7f61 377 SUPERFAMILY SSF103263 4 353 7.33E-146 T 01-11-2018 IPR035904 Chorismate synthase AroC superfamily KEGG: 00400+4.2.3.5|MetaCyc: PWY-6163 CDA09_16480 79bb53362374cf89544640d6e55f7f61 377 ProSitePatterns PS00787 Chorismate synthase signature 1. 16 31 - T 01-11-2018 IPR020541 Chorismate synthase, conserved site GO:0004107|GO:0009073 KEGG: 00400+4.2.3.5|MetaCyc: PWY-6163 CDA09_16480 79bb53362374cf89544640d6e55f7f61 377 Pfam PF01264 Chorismate synthase 12 345 6.2E-136 T 01-11-2018 IPR000453 Chorismate synthase GO:0004107|GO:0009073 KEGG: 00400+4.2.3.5|MetaCyc: PWY-6163 CDA09_16480 79bb53362374cf89544640d6e55f7f61 377 Hamap MF_00300 Chorismate synthase [aroC]. 10 354 36.372 T 01-11-2018 IPR000453 Chorismate synthase GO:0004107|GO:0009073 KEGG: 00400+4.2.3.5|MetaCyc: PWY-6163 CDA09_16480 79bb53362374cf89544640d6e55f7f61 377 Gene3D G3DSA:3.60.150.10 1 363 5.2E-150 T 01-11-2018 IPR035904 Chorismate synthase AroC superfamily KEGG: 00400+4.2.3.5|MetaCyc: PWY-6163 CDA09_16480 79bb53362374cf89544640d6e55f7f61 377 ProSitePatterns PS00788 Chorismate synthase signature 2. 124 140 - T 01-11-2018 IPR020541 Chorismate synthase, conserved site GO:0004107|GO:0009073 KEGG: 00400+4.2.3.5|MetaCyc: PWY-6163 CDA09_16480 79bb53362374cf89544640d6e55f7f61 377 PIRSF PIRSF001456 3 364 1.8E-132 T 01-11-2018 IPR000453 Chorismate synthase GO:0004107|GO:0009073 KEGG: 00400+4.2.3.5|MetaCyc: PWY-6163 CDA09_16480 79bb53362374cf89544640d6e55f7f61 377 TIGRFAM TIGR00033 aroC: chorismate synthase 12 350 5.4E-136 T 01-11-2018 IPR000453 Chorismate synthase GO:0004107|GO:0009073 KEGG: 00400+4.2.3.5|MetaCyc: PWY-6163 CDA09_16480 79bb53362374cf89544640d6e55f7f61 377 ProSitePatterns PS00789 Chorismate synthase signature 3. 319 335 - T 01-11-2018 IPR020541 Chorismate synthase, conserved site GO:0004107|GO:0009073 KEGG: 00400+4.2.3.5|MetaCyc: PWY-6163 CDA09_17525 053987ccf3b1c3f47d01f542af201458 262 Pfam PF10108 Predicted 3'-5' exonuclease related to the exonuclease domain of PolB 46 259 7.5E-93 T 01-11-2018 IPR019288 Predicted 3'-5' exonuclease, PolB-like CDA09_17525 053987ccf3b1c3f47d01f542af201458 262 Gene3D G3DSA:3.30.420.10 3 217 3.4E-19 T 01-11-2018 IPR036397 Ribonuclease H superfamily GO:0003676 CDA09_17525 053987ccf3b1c3f47d01f542af201458 262 SUPERFAMILY SSF53098 2 231 1.14E-42 T 01-11-2018 IPR012337 Ribonuclease H-like superfamily CDA09_20120 ac288c3e876f66ab7955d01771b059ed 262 PIRSF PIRSF036427 9 249 2.1E-60 T 01-11-2018 IPR012382 Precorrin-2 C(20)-methyltransferase GO:0008757|GO:0009236|GO:0030788 CDA09_20120 ac288c3e876f66ab7955d01771b059ed 262 SUPERFAMILY SSF53790 7 249 1.24E-38 T 01-11-2018 IPR035996 Tetrapyrrole methylase superfamily GO:0008168 Reactome: R-HSA-5358493 CDA09_20120 ac288c3e876f66ab7955d01771b059ed 262 Pfam PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases 12 222 1.1E-40 T 01-11-2018 IPR000878 Tetrapyrrole methylase GO:0008168 Reactome: R-HSA-5358493 CDA09_20120 ac288c3e876f66ab7955d01771b059ed 262 Gene3D G3DSA:3.30.950.10 140 258 2.8E-25 T 01-11-2018 IPR014776 Tetrapyrrole methylase, subdomain 2 GO:0008168 Reactome: R-HSA-5358493 CDA09_20120 ac288c3e876f66ab7955d01771b059ed 262 TIGRFAM TIGR01467 cobI_cbiL: precorrin-2 C(20)-methyltransferase 11 241 1.4E-70 T 01-11-2018 IPR006364 Precorrin-2 C(20)-methyltransferase domain GO:0008757|GO:0009236 CDA09_20120 ac288c3e876f66ab7955d01771b059ed 262 Gene3D G3DSA:3.40.1010.10 9 139 9.0E-26 T 01-11-2018 IPR014777 Tetrapyrrole methylase, subdomain 1 GO:0008168 Reactome: R-HSA-5358493 CDA09_13720 afaa1771a1c8317d2940937dd47c76c1 309 Pfam PF01012 Electron transfer flavoprotein domain 3 170 3.5E-39 T 01-11-2018 IPR014730 Electron transfer flavoprotein, alpha/beta-subunit, N-terminal Reactome: R-HSA-611105 CDA09_13720 afaa1771a1c8317d2940937dd47c76c1 309 SUPERFAMILY SSF52467 188 308 5.12E-45 T 01-11-2018 IPR029035 DHS-like NAD/FAD-binding domain superfamily CDA09_13720 afaa1771a1c8317d2940937dd47c76c1 309 Gene3D G3DSA:3.40.50.1220 183 309 3.2E-55 T 01-11-2018 CDA09_13720 afaa1771a1c8317d2940937dd47c76c1 309 SUPERFAMILY SSF52402 3 183 5.93E-54 T 01-11-2018 CDA09_13720 afaa1771a1c8317d2940937dd47c76c1 309 Gene3D G3DSA:3.40.50.620 2 182 2.6E-53 T 01-11-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold CDA09_13720 afaa1771a1c8317d2940937dd47c76c1 309 Pfam PF00766 Electron transfer flavoprotein FAD-binding domain 189 272 4.7E-34 T 01-11-2018 IPR014731 Electron transfer flavoprotein, alpha subunit, C-terminal Reactome: R-HSA-611105 CDA09_13720 afaa1771a1c8317d2940937dd47c76c1 309 PIRSF PIRSF000089 1 309 4.9E-105 T 01-11-2018 IPR001308 Electron transfer flavoprotein alpha subunit/FixB GO:0009055|GO:0050660 Reactome: R-HSA-611105 CDA09_13720 afaa1771a1c8317d2940937dd47c76c1 309 SMART SM00893 3 181 7.6E-53 T 01-11-2018 IPR014730 Electron transfer flavoprotein, alpha/beta-subunit, N-terminal Reactome: R-HSA-611105 CDA09_10480 eb898be5120b6fb80ed408f48053d8c1 333 SUPERFAMILY SSF47240 46 287 6.29E-84 T 01-11-2018 IPR009078 Ferritin-like superfamily CDA09_10480 eb898be5120b6fb80ed408f48053d8c1 333 Gene3D G3DSA:1.20.1260.10 19 328 7.1E-133 T 01-11-2018 IPR012347 Ferritin-like CDA09_10480 eb898be5120b6fb80ed408f48053d8c1 333 Pfam PF05138 Phenylacetic acid catabolic protein 36 310 7.0E-103 T 01-11-2018 IPR007814 1,2-phenylacetyl-CoA epoxidase, subunit A/C GO:0010124 CDA09_10480 eb898be5120b6fb80ed408f48053d8c1 333 TIGRFAM TIGR02156 PA_CoA_Oxy1: phenylacetate-CoA oxygenase, PaaG subunit 26 314 2.1E-162 T 01-11-2018 IPR011881 1,2-phenylacetyl-CoA epoxidase, subunit A GO:0010124|GO:0097266 KEGG: 00360+1.14.13.149 CDA09_20995 7152dedbb80a225a6bd1200c7851ca1d 272 Gene3D G3DSA:3.20.20.450 7 244 6.9E-40 T 01-11-2018 IPR035919 EAL domain superfamily CDA09_20995 7152dedbb80a225a6bd1200c7851ca1d 272 SMART SM00052 2 239 3.4E-8 T 01-11-2018 IPR001633 EAL domain CDA09_20995 7152dedbb80a225a6bd1200c7851ca1d 272 SUPERFAMILY SSF141868 10 233 4.32E-43 T 01-11-2018 IPR035919 EAL domain superfamily CDA09_20995 7152dedbb80a225a6bd1200c7851ca1d 272 Pfam PF00563 EAL domain 13 232 4.9E-33 T 01-11-2018 IPR001633 EAL domain CDA09_18115 d0d54d87cc4c7a9127584d78819c562e 455 ProSitePatterns PS00163 Fumarate lyases signature. 294 303 - T 01-11-2018 IPR020557 Fumarate lyase, conserved site GO:0003824 CDA09_18115 d0d54d87cc4c7a9127584d78819c562e 455 Pfam PF00206 Lyase 14 313 3.1E-62 T 01-11-2018 IPR022761 Fumarate lyase, N-terminal CDA09_18115 d0d54d87cc4c7a9127584d78819c562e 455 SUPERFAMILY SSF48557 4 447 2.51E-107 T 01-11-2018 IPR008948 L-Aspartase-like GO:0003824 CDA09_18115 d0d54d87cc4c7a9127584d78819c562e 455 TIGRFAM TIGR00928 purB: adenylosuccinate lyase 12 454 2.3E-121 T 01-11-2018 IPR004769 Adenylosuccinate lyase GO:0004018|GO:0009152 KEGG: 00230+4.3.2.2|KEGG: 00250+4.3.2.2|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7219|MetaCyc: PWY-7234|Reactome: R-HSA-73817 CDA09_18115 d0d54d87cc4c7a9127584d78819c562e 455 Gene3D G3DSA:1.10.40.30 382 445 1.4E-148 T 01-11-2018 CDA09_18115 d0d54d87cc4c7a9127584d78819c562e 455 PRINTS PR00149 Fumarate lyase superfamily signature 294 310 6.1E-20 T 01-11-2018 IPR000362 Fumarate lyase family CDA09_18115 d0d54d87cc4c7a9127584d78819c562e 455 PRINTS PR00149 Fumarate lyase superfamily signature 163 181 6.1E-20 T 01-11-2018 IPR000362 Fumarate lyase family CDA09_18115 d0d54d87cc4c7a9127584d78819c562e 455 PRINTS PR00149 Fumarate lyase superfamily signature 251 278 6.1E-20 T 01-11-2018 IPR000362 Fumarate lyase family CDA09_18115 d0d54d87cc4c7a9127584d78819c562e 455 PRINTS PR00149 Fumarate lyase superfamily signature 117 135 6.1E-20 T 01-11-2018 IPR000362 Fumarate lyase family CDA09_18115 d0d54d87cc4c7a9127584d78819c562e 455 Pfam PF08328 Adenylosuccinate lyase C-terminal 331 445 5.7E-49 T 01-11-2018 IPR013539 Adenylosuccinate lyase PurB, C-terminal GO:0004018|GO:0006188 KEGG: 00230+4.3.2.2|KEGG: 00250+4.3.2.2|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7219|MetaCyc: PWY-7234 CDA09_18115 d0d54d87cc4c7a9127584d78819c562e 455 Gene3D G3DSA:1.20.200.10 118 446 1.4E-148 T 01-11-2018 CDA09_18115 d0d54d87cc4c7a9127584d78819c562e 455 Gene3D G3DSA:1.10.275.10 1 117 3.2E-42 T 01-11-2018 IPR024083 Fumarase/histidase, N-terminal CDA09_00250 97565cbf599b6b660e9a8ba3795394be 155 Pfam PF04361 Protein of unknown function (DUF494) 1 148 2.8E-52 T 01-11-2018 IPR007456 Smg CDA09_00250 97565cbf599b6b660e9a8ba3795394be 155 Hamap MF_00598 Protein Smg [smg]. 1 154 27.136 T 01-11-2018 IPR007456 Smg CDA09_05700 7fdbd5b52d858ef771f8c0d36d8b6b16 199 PIRSF PIRSF003159 1 181 1.6E-90 T 01-11-2018 IPR007944 Flagellar transcriptional activator FlhC GO:0003677|GO:0045893|GO:1902208 CDA09_05700 7fdbd5b52d858ef771f8c0d36d8b6b16 199 ProDom PD016592 ACTIVATOR TRANSCRIPTIONAL FLAGELLUM FLAGELLAR TRANSCRIPTION FLHC RNA DNA-BINDING REGULATION DNA-DIRECTED 1 171 2.0E-65 T 01-11-2018 IPR007944 Flagellar transcriptional activator FlhC GO:0003677|GO:0045893|GO:1902208 CDA09_05700 7fdbd5b52d858ef771f8c0d36d8b6b16 199 Pfam PF05280 Flagellar transcriptional activator (FlhC) 1 171 3.3E-84 T 01-11-2018 IPR007944 Flagellar transcriptional activator FlhC GO:0003677|GO:0045893|GO:1902208 CDA09_05700 7fdbd5b52d858ef771f8c0d36d8b6b16 199 Hamap MF_01891 Flagellar transcriptional regulator FlhC [flhC]. 1 197 45.343 T 01-11-2018 IPR007944 Flagellar transcriptional activator FlhC GO:0003677|GO:0045893|GO:1902208 CDA09_05700 7fdbd5b52d858ef771f8c0d36d8b6b16 199 SUPERFAMILY SSF160930 5 160 2.75E-60 T 01-11-2018 CDA09_06420 194685b9ab9f65c6c91a7310a98296e1 514 Pfam PF00329 Respiratory-chain NADH dehydrogenase, 30 Kd subunit 28 132 3.5E-9 T 01-11-2018 IPR001268 NADH:ubiquinone oxidoreductase, 30kDa subunit GO:0008137|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 CDA09_06420 194685b9ab9f65c6c91a7310a98296e1 514 Gene3D G3DSA:1.10.645.20 160 513 9.8E-104 T 01-11-2018 IPR038290 NADH-quinone oxidoreductase, subunit D superfamily Reactome: R-HSA-611105|Reactome: R-HSA-6799198 CDA09_06420 194685b9ab9f65c6c91a7310a98296e1 514 SUPERFAMILY SSF56762 169 513 2.35E-95 T 01-11-2018 IPR029014 [NiFe]-hydrogenase, large subunit Reactome: R-HSA-611105|Reactome: R-HSA-6799198 CDA09_06420 194685b9ab9f65c6c91a7310a98296e1 514 SUPERFAMILY SSF143243 24 173 1.05E-22 T 01-11-2018 IPR037232 NADH:ubiquinone oxidoreductase, 30kDa subunit superfamily Reactome: R-HSA-611105|Reactome: R-HSA-6799198 CDA09_06420 194685b9ab9f65c6c91a7310a98296e1 514 Pfam PF00346 Respiratory-chain NADH dehydrogenase, 49 Kd subunit 283 436 1.3E-28 T 01-11-2018 IPR001135 NADH-quinone oxidoreductase, subunit D GO:0016651|GO:0048038|GO:0051287|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 CDA09_18035 5e1375c9b7c3e1ad910c117fb690615e 204 SMART SM00421 139 196 1.8E-18 T 01-11-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 CDA09_18035 5e1375c9b7c3e1ad910c117fb690615e 204 Gene3D G3DSA:1.10.10.10 132 197 3.8E-20 T 01-11-2018 IPR036388 Winged helix-like DNA-binding domain superfamily CDA09_18035 5e1375c9b7c3e1ad910c117fb690615e 204 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 156 172 1.3E-11 T 01-11-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 CDA09_18035 5e1375c9b7c3e1ad910c117fb690615e 204 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 172 184 1.3E-11 T 01-11-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 CDA09_18035 5e1375c9b7c3e1ad910c117fb690615e 204 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 142 156 1.3E-11 T 01-11-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 CDA09_18035 5e1375c9b7c3e1ad910c117fb690615e 204 SUPERFAMILY SSF52172 8 154 6.4E-32 T 01-11-2018 IPR011006 CheY-like superfamily CDA09_18035 5e1375c9b7c3e1ad910c117fb690615e 204 SMART SM00448 4 115 5.1E-26 T 01-11-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 CDA09_18035 5e1375c9b7c3e1ad910c117fb690615e 204 Pfam PF00072 Response regulator receiver domain 8 115 5.2E-27 T 01-11-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 CDA09_18035 5e1375c9b7c3e1ad910c117fb690615e 204 Pfam PF00196 Bacterial regulatory proteins, luxR family 141 195 2.4E-19 T 01-11-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 CDA09_18035 5e1375c9b7c3e1ad910c117fb690615e 204 Gene3D G3DSA:3.40.50.2300 1 131 3.5E-44 T 01-11-2018 CDA09_18035 5e1375c9b7c3e1ad910c117fb690615e 204 SUPERFAMILY SSF46894 136 195 2.47E-16 T 01-11-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 CDA09_19990 d282e4fe5e090d5bbe5aa169fd5dec5f 555 PRINTS PR00811 Bacterial general secretion pathway protein D signature 324 348 1.5E-13 T 01-11-2018 IPR001775 GspD/PilQ family CDA09_19990 d282e4fe5e090d5bbe5aa169fd5dec5f 555 PRINTS PR00811 Bacterial general secretion pathway protein D signature 485 499 1.5E-13 T 01-11-2018 IPR001775 GspD/PilQ family CDA09_19990 d282e4fe5e090d5bbe5aa169fd5dec5f 555 PRINTS PR00811 Bacterial general secretion pathway protein D signature 462 480 1.5E-13 T 01-11-2018 IPR001775 GspD/PilQ family CDA09_19990 d282e4fe5e090d5bbe5aa169fd5dec5f 555 PRINTS PR00811 Bacterial general secretion pathway protein D signature 266 276 1.5E-13 T 01-11-2018 IPR001775 GspD/PilQ family CDA09_19990 d282e4fe5e090d5bbe5aa169fd5dec5f 555 Pfam PF00263 Bacterial type II and III secretion system protein 329 498 7.7E-45 T 01-11-2018 IPR004846 Type II/III secretion system GO:0009306 CDA09_19990 d282e4fe5e090d5bbe5aa169fd5dec5f 555 Pfam PF13629 Pilus formation protein N terminal region 140 183 6.2E-9 T 01-11-2018 IPR032789 Pilus formation protein, N-terminal CDA09_10435 11f6e4410a8c6b28df82f6fd229467f6 486 ProSitePatterns PS00687 Aldehyde dehydrogenases glutamic acid active site. 253 260 - T 01-11-2018 IPR029510 Aldehyde dehydrogenase, glutamic acid active site GO:0016491|GO:0055114 CDA09_10435 11f6e4410a8c6b28df82f6fd229467f6 486 Gene3D G3DSA:3.40.605.10 17 474 8.3E-169 T 01-11-2018 IPR016162 Aldehyde dehydrogenase, N-terminal GO:0016491|GO:0055114 CDA09_10435 11f6e4410a8c6b28df82f6fd229467f6 486 TIGRFAM TIGR03216 OH_muco_semi_DH: 2-hydroxymuconic semialdehyde dehydrogenase 4 486 1.2E-268 T 01-11-2018 IPR017628 2-hydroxymuconic semialdehyde dehydrogenase GO:0016620|GO:0055114 CDA09_10435 11f6e4410a8c6b28df82f6fd229467f6 486 ProSitePatterns PS00070 Aldehyde dehydrogenases cysteine active site. 281 292 - T 01-11-2018 IPR016160 Aldehyde dehydrogenase, cysteine active site GO:0016491|GO:0055114 CDA09_10435 11f6e4410a8c6b28df82f6fd229467f6 486 SUPERFAMILY SSF53720 2 485 9.03E-156 T 01-11-2018 IPR016161 Aldehyde/histidinol dehydrogenase GO:0016491|GO:0055114 CDA09_10435 11f6e4410a8c6b28df82f6fd229467f6 486 Pfam PF00171 Aldehyde dehydrogenase family 16 482 7.1E-153 T 01-11-2018 IPR015590 Aldehyde dehydrogenase domain GO:0016491|GO:0055114 CDA09_10435 11f6e4410a8c6b28df82f6fd229467f6 486 Gene3D G3DSA:3.40.309.10 257 451 8.3E-169 T 01-11-2018 IPR016163 Aldehyde dehydrogenase, C-terminal GO:0016491|GO:0016620|GO:0055114 CDA09_16170 a1ccfd1be0910fad83445ff1572a0462 493 Pfam PF00361 Proton-conducting membrane transporter 134 418 8.1E-79 T 01-11-2018 IPR001750 NADH:quinone oxidoreductase/Mrp antiporter, membrane subunit Reactome: R-HSA-611105|Reactome: R-HSA-6799198 CDA09_16170 a1ccfd1be0910fad83445ff1572a0462 493 PRINTS PR01437 NADH-ubiquinone oxidoreductase subunit 4 signature 326 345 2.6E-49 T 01-11-2018 IPR003918 NADH:ubiquinone oxidoreductase GO:0008137|GO:0042773|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 CDA09_16170 a1ccfd1be0910fad83445ff1572a0462 493 PRINTS PR01437 NADH-ubiquinone oxidoreductase subunit 4 signature 378 404 2.6E-49 T 01-11-2018 IPR003918 NADH:ubiquinone oxidoreductase GO:0008137|GO:0042773|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 CDA09_16170 a1ccfd1be0910fad83445ff1572a0462 493 PRINTS PR01437 NADH-ubiquinone oxidoreductase subunit 4 signature 138 157 2.6E-49 T 01-11-2018 IPR003918 NADH:ubiquinone oxidoreductase GO:0008137|GO:0042773|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 CDA09_16170 a1ccfd1be0910fad83445ff1572a0462 493 PRINTS PR01437 NADH-ubiquinone oxidoreductase subunit 4 signature 238 262 2.6E-49 T 01-11-2018 IPR003918 NADH:ubiquinone oxidoreductase GO:0008137|GO:0042773|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 CDA09_16170 a1ccfd1be0910fad83445ff1572a0462 493 PRINTS PR01437 NADH-ubiquinone oxidoreductase subunit 4 signature 168 192 2.6E-49 T 01-11-2018 IPR003918 NADH:ubiquinone oxidoreductase GO:0008137|GO:0042773|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 CDA09_16170 a1ccfd1be0910fad83445ff1572a0462 493 TIGRFAM TIGR01972 NDH_I_M: proton-translocating NADH-quinone oxidoreductase, chain M 7 487 1.6E-189 T 01-11-2018 IPR010227 NADH-quinone oxidoreductase, chain M/4 GO:0008137|GO:0042773|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 CDA09_03145 87daf893ed145685891b7adcfa69f9a2 125 Pfam PF11604 Copper binding periplasmic protein CusF 60 124 1.1E-24 T 01-11-2018 IPR021647 Copper binding periplasmic protein CusF CDA09_03145 87daf893ed145685891b7adcfa69f9a2 125 Gene3D G3DSA:2.40.50.320 54 125 1.1E-25 T 01-11-2018 CDA09_18420 53320f1c5b12546e3502a944436074c3 184 SUPERFAMILY SSF51182 1 179 2.95E-81 T 01-11-2018 IPR011051 RmlC-like cupin domain superfamily CDA09_18420 53320f1c5b12546e3502a944436074c3 184 TIGRFAM TIGR01221 rmlC: dTDP-4-dehydrorhamnose 3,5-epimerase 2 177 4.0E-85 T 01-11-2018 IPR000888 dTDP-4-dehydrorhamnose 3,5-epimerase-related GO:0008830 CDA09_18420 53320f1c5b12546e3502a944436074c3 184 ProDom PD001462 35-EPIMERASE DTDP-4-DEHYDRORHAMNOSE ISOMERASE RMLC EPIMERASE RELATED DTDP-6-DEOXY-D-GLUCOSE-35-EPIMERASE DTDP-4-KETO-6-DEOXY-D-GLUCOSE DTDP-4-KETO-6-DEOXYGLUCOSE-35-EPIMERASE DTDP-L-RHAMNOSE 1 181 1.0E-67 T 01-11-2018 IPR000888 dTDP-4-dehydrorhamnose 3,5-epimerase-related GO:0008830 CDA09_18420 53320f1c5b12546e3502a944436074c3 184 Gene3D G3DSA:2.60.120.10 1 181 3.5E-76 T 01-11-2018 IPR014710 RmlC-like jelly roll fold CDA09_18420 53320f1c5b12546e3502a944436074c3 184 Pfam PF00908 dTDP-4-dehydrorhamnose 3,5-epimerase 6 173 8.9E-76 T 01-11-2018 IPR000888 dTDP-4-dehydrorhamnose 3,5-epimerase-related GO:0008830 CDA09_01735 2926cd5487c660b165d2deb202e5339c 596 Pfam PF00005 ABC transporter 366 522 1.4E-27 T 01-11-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 CDA09_01735 2926cd5487c660b165d2deb202e5339c 596 SUPERFAMILY SSF52540 347 592 4.22E-60 T 01-11-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CDA09_01735 2926cd5487c660b165d2deb202e5339c 596 Pfam PF02653 Branched-chain amino acid transport system / permease component 26 305 2.0E-36 T 01-11-2018 IPR001851 ABC transporter, permease GO:0016020|GO:0022857|GO:0055085 CDA09_01735 2926cd5487c660b165d2deb202e5339c 596 Gene3D G3DSA:3.40.50.300 344 594 4.1E-57 T 01-11-2018 CDA09_01735 2926cd5487c660b165d2deb202e5339c 596 Pfam PF12399 Branched-chain amino acid ATP-binding cassette transporter 571 593 7.1E-11 T 01-11-2018 IPR032823 Branched-chain amino acid ATP-binding cassette transporter, C-terminal CDA09_01735 2926cd5487c660b165d2deb202e5339c 596 SMART SM00382 373 579 6.7E-8 T 01-11-2018 IPR003593 AAA+ ATPase domain CDA09_01430 291775d3d6ac9e2139eda7264fc122ca 313 Gene3D G3DSA:2.120.10.30 58 306 2.7E-11 T 01-11-2018 IPR011042 Six-bladed beta-propeller, TolB-like CDA09_01430 291775d3d6ac9e2139eda7264fc122ca 313 SUPERFAMILY SSF101898 68 306 7.59E-15 T 01-11-2018 CDA09_02540 76d2f9e796e7e525cf9543f0be25d335 349 SUPERFAMILY SSF53756 3 340 1.57E-80 T 01-11-2018 CDA09_02540 76d2f9e796e7e525cf9543f0be25d335 349 Pfam PF01075 Glycosyltransferase family 9 (heptosyltransferase) 81 319 3.5E-35 T 01-11-2018 IPR002201 Glycosyl transferase, family 9 GO:0016757 CDA09_02540 76d2f9e796e7e525cf9543f0be25d335 349 Gene3D G3DSA:3.40.50.2000 3 159 5.4E-39 T 01-11-2018 CDA09_02540 76d2f9e796e7e525cf9543f0be25d335 349 Gene3D G3DSA:3.40.50.2000 177 345 9.3E-35 T 01-11-2018 CDA09_03950 748d2ba4fbc8a71631386be5effa265b 150 SUPERFAMILY SSF52821 14 149 1.14E-21 T 01-11-2018 IPR036873 Rhodanese-like domain superfamily CDA09_03950 748d2ba4fbc8a71631386be5effa265b 150 SMART SM00450 26 133 2.1E-10 T 01-11-2018 IPR001763 Rhodanese-like domain CDA09_03950 748d2ba4fbc8a71631386be5effa265b 150 Gene3D G3DSA:3.40.250.10 20 150 2.9E-34 T 01-11-2018 IPR036873 Rhodanese-like domain superfamily CDA09_03950 748d2ba4fbc8a71631386be5effa265b 150 Pfam PF00581 Rhodanese-like domain 33 125 2.9E-10 T 01-11-2018 IPR001763 Rhodanese-like domain CDA09_09560 6aa2ab3b735ffc9f910bc7b58db59df2 491 Gene3D G3DSA:3.40.50.150 124 466 2.0E-85 T 01-11-2018 CDA09_09560 6aa2ab3b735ffc9f910bc7b58db59df2 491 ProSitePatterns PS00092 N-6 Adenine-specific DNA methylases signature. 256 262 - T 01-11-2018 IPR002052 DNA methylase, N-6 adenine-specific, conserved site GO:0003676|GO:0008168|GO:0032259 CDA09_09560 6aa2ab3b735ffc9f910bc7b58db59df2 491 Pfam PF12161 HsdM N-terminal domain 7 114 4.9E-14 T 01-11-2018 IPR022749 N6 adenine-specific DNA methyltransferase, N-terminal domain CDA09_09560 6aa2ab3b735ffc9f910bc7b58db59df2 491 PRINTS PR00507 N12 class N6 adenine-specific DNA methyltransferase signature 253 265 1.7E-21 T 01-11-2018 CDA09_09560 6aa2ab3b735ffc9f910bc7b58db59df2 491 PRINTS PR00507 N12 class N6 adenine-specific DNA methyltransferase signature 147 163 1.7E-21 T 01-11-2018 CDA09_09560 6aa2ab3b735ffc9f910bc7b58db59df2 491 PRINTS PR00507 N12 class N6 adenine-specific DNA methyltransferase signature 171 185 1.7E-21 T 01-11-2018 CDA09_09560 6aa2ab3b735ffc9f910bc7b58db59df2 491 PRINTS PR00507 N12 class N6 adenine-specific DNA methyltransferase signature 295 319 1.7E-21 T 01-11-2018 CDA09_09560 6aa2ab3b735ffc9f910bc7b58db59df2 491 Pfam PF02384 N-6 DNA Methylase 124 412 2.3E-71 T 01-11-2018 IPR003356 DNA methylase, adenine-specific GO:0003677|GO:0006306|GO:0008170 CDA09_09560 6aa2ab3b735ffc9f910bc7b58db59df2 491 Gene3D G3DSA:1.20.1260.30 1 122 1.9E-39 T 01-11-2018 IPR038333 N6 adenine-specific DNA methyltransferase, N-terminal domain superfamily CDA09_09560 6aa2ab3b735ffc9f910bc7b58db59df2 491 SUPERFAMILY SSF53335 7 489 3.35E-124 T 01-11-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase CDA09_11025 00a638d32c93ba77c5a314fbaad69037 517 Pfam PF06253 Trimethylamine methyltransferase (MTTB) 10 508 1.7E-216 T 01-11-2018 IPR010426 Trimethylamine methyltransferase GO:0008168|GO:0015948 KEGG: 00680+2.1.1.250|MetaCyc: PWY-5250 CDA09_11025 00a638d32c93ba77c5a314fbaad69037 517 PIRSF PIRSF037567 2 513 1.5E-165 T 01-11-2018 IPR010426 Trimethylamine methyltransferase GO:0008168|GO:0015948 KEGG: 00680+2.1.1.250|MetaCyc: PWY-5250 CDA09_11025 00a638d32c93ba77c5a314fbaad69037 517 SUPERFAMILY SSF51679 397 507 1.86E-6 T 01-11-2018 IPR036661 Luciferase-like domain superfamily GO:0016705|GO:0055114 CDA09_11025 00a638d32c93ba77c5a314fbaad69037 517 Gene3D G3DSA:3.20.20.480 25 512 3.0E-164 T 01-11-2018 IPR038601 MttB-like superfamily KEGG: 00680+2.1.1.250|MetaCyc: PWY-5250 CDA09_10100 692d45f0a8f803e3c0f2073dd4cdc7d9 386 Pfam PF02515 CoA-transferase family III 4 357 1.7E-84 T 01-11-2018 IPR003673 CoA-transferase family III GO:0003824 CDA09_10100 692d45f0a8f803e3c0f2073dd4cdc7d9 386 Gene3D G3DSA:3.30.1540.10 220 307 5.8E-100 T 01-11-2018 CDA09_10100 692d45f0a8f803e3c0f2073dd4cdc7d9 386 SUPERFAMILY SSF89796 2 385 4.06E-103 T 01-11-2018 IPR023606 CoA-transferase family III domain superfamily CDA09_10100 692d45f0a8f803e3c0f2073dd4cdc7d9 386 Gene3D G3DSA:3.40.50.10540 4 324 5.8E-100 T 01-11-2018 IPR023606 CoA-transferase family III domain superfamily CDA09_01920 c2c6f653f501ef58f0e1c2ebbfa5953a 530 Gene3D G3DSA:3.40.109.10 26 240 2.9E-52 T 01-11-2018 IPR000415 Nitroreductase-like GO:0016491 Reactome: R-HSA-209968 CDA09_01920 c2c6f653f501ef58f0e1c2ebbfa5953a 530 SUPERFAMILY SSF55469 373 523 3.93E-12 T 01-11-2018 IPR000415 Nitroreductase-like GO:0016491 Reactome: R-HSA-209968 CDA09_01920 c2c6f653f501ef58f0e1c2ebbfa5953a 530 Gene3D G3DSA:3.40.109.10 280 513 2.1E-32 T 01-11-2018 IPR000415 Nitroreductase-like GO:0016491 Reactome: R-HSA-209968 CDA09_01920 c2c6f653f501ef58f0e1c2ebbfa5953a 530 Pfam PF00881 Nitroreductase family 98 220 3.0E-7 T 01-11-2018 IPR029479 Nitroreductase Reactome: R-HSA-209968 CDA09_01920 c2c6f653f501ef58f0e1c2ebbfa5953a 530 Pfam PF00881 Nitroreductase family 379 511 2.4E-5 T 01-11-2018 IPR029479 Nitroreductase Reactome: R-HSA-209968 CDA09_01920 c2c6f653f501ef58f0e1c2ebbfa5953a 530 SUPERFAMILY SSF55469 98 259 3.8E-9 T 01-11-2018 IPR000415 Nitroreductase-like GO:0016491 Reactome: R-HSA-209968 CDA09_08385 3485d1daca4ece96ea951c1ec6b120d4 508 TIGRFAM TIGR01286 nifK: nitrogenase molybdenum-iron protein beta chain 2 508 1.1E-250 T 01-11-2018 IPR005976 Nitrogenase molybdenum-iron protein beta chain GO:0009399|GO:0016163|GO:0016612|GO:0055114 KEGG: 00625+1.18.6.1|KEGG: 00910+1.18.6.1 CDA09_08385 3485d1daca4ece96ea951c1ec6b120d4 508 SUPERFAMILY SSF53807 3 495 1.28E-167 T 01-11-2018 CDA09_08385 3485d1daca4ece96ea951c1ec6b120d4 508 Gene3D G3DSA:3.40.50.1980 58 472 1.7E-161 T 01-11-2018 CDA09_08385 3485d1daca4ece96ea951c1ec6b120d4 508 ProSitePatterns PS00699 Nitrogenases component 1 alpha and beta subunits signature 1. 87 94 - T 01-11-2018 IPR000318 Nitrogenase component 1, conserved site GO:0009399|GO:0016163 CDA09_08385 3485d1daca4ece96ea951c1ec6b120d4 508 Pfam PF11844 Domain of unknown function (DUF3364) 1 55 3.2E-22 T 01-11-2018 IPR024564 Nitrogenase molybdenum-iron protein beta chain, N-terminal KEGG: 00625+1.18.6.1|KEGG: 00910+1.18.6.1 CDA09_08385 3485d1daca4ece96ea951c1ec6b120d4 508 Gene3D G3DSA:3.40.50.1980 69 209 1.7E-161 T 01-11-2018 CDA09_08385 3485d1daca4ece96ea951c1ec6b120d4 508 Pfam PF00148 Nitrogenase component 1 type Oxidoreductase 69 487 5.6E-120 T 01-11-2018 IPR000510 Nitrogenase/oxidoreductase, component 1 GO:0016491|GO:0055114 CDA09_08385 3485d1daca4ece96ea951c1ec6b120d4 508 Gene3D G3DSA:3.40.50.1980 210 479 1.7E-161 T 01-11-2018 CDA09_08385 3485d1daca4ece96ea951c1ec6b120d4 508 Gene3D G3DSA:1.20.89.10 316 494 1.7E-161 T 01-11-2018 CDA09_08385 3485d1daca4ece96ea951c1ec6b120d4 508 ProSitePatterns PS00090 Nitrogenases component 1 alpha and beta subunits signature 2. 150 164 - T 01-11-2018 IPR000318 Nitrogenase component 1, conserved site GO:0009399|GO:0016163 CDA09_11330 418c688d9ba5cfceb6a7fbf06fe284a0 170 SUPERFAMILY SSF54211 4 167 3.41E-67 T 01-11-2018 IPR020568 Ribosomal protein S5 domain 2-type fold CDA09_11330 418c688d9ba5cfceb6a7fbf06fe284a0 170 Gene3D G3DSA:3.30.230.60 2 170 2.8E-77 T 01-11-2018 IPR037075 Formaldehyde-activating enzyme superfamily GO:0016051|GO:0016840 KEGG: 00030+4.1.2.43|KEGG: 00680+4.2.1.147+4.1.2.43|MetaCyc: PWY-1723|MetaCyc: PWY-1861|MetaCyc: PWY-7796 CDA09_11330 418c688d9ba5cfceb6a7fbf06fe284a0 170 TIGRFAM TIGR03126 one_C_fae: formaldehyde-activating enzyme 8 166 9.8E-75 T 01-11-2018 IPR014826 Formaldehyde-activating enzyme GO:0016051|GO:0016840 KEGG: 00030+4.1.2.43|KEGG: 00680+4.2.1.147+4.1.2.43|MetaCyc: PWY-1723|MetaCyc: PWY-1861|MetaCyc: PWY-7796 CDA09_11330 418c688d9ba5cfceb6a7fbf06fe284a0 170 Pfam PF08714 Formaldehyde-activating enzyme (Fae) 9 166 2.8E-70 T 01-11-2018 IPR014826 Formaldehyde-activating enzyme GO:0016051|GO:0016840 KEGG: 00030+4.1.2.43|KEGG: 00680+4.2.1.147+4.1.2.43|MetaCyc: PWY-1723|MetaCyc: PWY-1861|MetaCyc: PWY-7796 CDA09_07190 110d095d3547207b5bd740ee988ba673 161 Gene3D G3DSA:1.20.1260.10 8 136 9.2E-31 T 01-11-2018 IPR012347 Ferritin-like CDA09_07190 110d095d3547207b5bd740ee988ba673 161 Pfam PF02915 Rubrerythrin 15 130 2.9E-11 T 01-11-2018 IPR003251 Rubrerythrin GO:0016491|GO:0046872|GO:0055114 CDA09_07190 110d095d3547207b5bd740ee988ba673 161 SUPERFAMILY SSF47240 10 134 2.87E-29 T 01-11-2018 IPR009078 Ferritin-like superfamily CDA09_11685 2dfd5fe4094cb04fafd8b43140573cb0 119 SUPERFAMILY SSF46785 2 93 9.11E-23 T 01-11-2018 IPR036390 Winged helix DNA-binding domain superfamily CDA09_11685 2dfd5fe4094cb04fafd8b43140573cb0 119 Pfam PF12840 Helix-turn-helix domain 7 69 2.2E-14 T 01-11-2018 CDA09_11685 2dfd5fe4094cb04fafd8b43140573cb0 119 PRINTS PR00778 Bacterial regulatory protein ArsR family signature 45 60 2.4E-6 T 01-11-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 CDA09_11685 2dfd5fe4094cb04fafd8b43140573cb0 119 PRINTS PR00778 Bacterial regulatory protein ArsR family signature 60 75 2.4E-6 T 01-11-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 CDA09_11685 2dfd5fe4094cb04fafd8b43140573cb0 119 PRINTS PR00778 Bacterial regulatory protein ArsR family signature 10 25 2.4E-6 T 01-11-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 CDA09_11685 2dfd5fe4094cb04fafd8b43140573cb0 119 Gene3D G3DSA:1.10.10.10 2 93 2.3E-20 T 01-11-2018 IPR036388 Winged helix-like DNA-binding domain superfamily CDA09_11685 2dfd5fe4094cb04fafd8b43140573cb0 119 SMART SM00418 8 88 1.7E-12 T 01-11-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 CDA09_19635 739f2e2c5331f51edaba3bb7cd098e52 209 Gene3D G3DSA:1.10.10.10 138 208 1.7E-20 T 01-11-2018 IPR036388 Winged helix-like DNA-binding domain superfamily CDA09_19635 739f2e2c5331f51edaba3bb7cd098e52 209 Gene3D G3DSA:3.40.50.2300 1 129 1.3E-29 T 01-11-2018 CDA09_19635 739f2e2c5331f51edaba3bb7cd098e52 209 SUPERFAMILY SSF46894 143 206 1.02E-18 T 01-11-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 CDA09_19635 739f2e2c5331f51edaba3bb7cd098e52 209 SMART SM00448 2 116 4.8E-26 T 01-11-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 CDA09_19635 739f2e2c5331f51edaba3bb7cd098e52 209 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 148 162 1.4E-10 T 01-11-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 CDA09_19635 739f2e2c5331f51edaba3bb7cd098e52 209 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 162 178 1.4E-10 T 01-11-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 CDA09_19635 739f2e2c5331f51edaba3bb7cd098e52 209 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 178 190 1.4E-10 T 01-11-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 CDA09_19635 739f2e2c5331f51edaba3bb7cd098e52 209 SUPERFAMILY SSF52172 3 123 1.71E-29 T 01-11-2018 IPR011006 CheY-like superfamily CDA09_19635 739f2e2c5331f51edaba3bb7cd098e52 209 SMART SM00421 145 202 1.1E-19 T 01-11-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 CDA09_19635 739f2e2c5331f51edaba3bb7cd098e52 209 Pfam PF00196 Bacterial regulatory proteins, luxR family 148 200 1.8E-16 T 01-11-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 CDA09_19635 739f2e2c5331f51edaba3bb7cd098e52 209 Pfam PF00072 Response regulator receiver domain 4 116 2.3E-21 T 01-11-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 CDA09_21690 8944455ccadc6ab7f9a5c83936dc53d5 145 Pfam PF11990 Protein of unknown function (DUF3487) 17 134 7.2E-42 T 01-11-2018 IPR021877 Protein of unknown function DUF3487 CDA09_21690 8944455ccadc6ab7f9a5c83936dc53d5 145 TIGRFAM TIGR03750 conj_TIGR03750: conjugative transfer region protein, TIGR03750 family 18 133 8.8E-42 T 01-11-2018 IPR021877 Protein of unknown function DUF3487 CDA09_01240 8b4a1b15446e6bbb5a075a97c3fe51dc 226 SUPERFAMILY SSF46785 151 220 9.29E-13 T 01-11-2018 IPR036390 Winged helix DNA-binding domain superfamily CDA09_01240 8b4a1b15446e6bbb5a075a97c3fe51dc 226 SMART SM00100 17 135 6.1E-16 T 01-11-2018 IPR000595 Cyclic nucleotide-binding domain CDA09_01240 8b4a1b15446e6bbb5a075a97c3fe51dc 226 Pfam PF00027 Cyclic nucleotide-binding domain 37 121 6.7E-17 T 01-11-2018 IPR000595 Cyclic nucleotide-binding domain CDA09_01240 8b4a1b15446e6bbb5a075a97c3fe51dc 226 Gene3D G3DSA:1.10.10.10 150 224 2.4E-21 T 01-11-2018 IPR036388 Winged helix-like DNA-binding domain superfamily CDA09_01240 8b4a1b15446e6bbb5a075a97c3fe51dc 226 Gene3D G3DSA:2.60.120.10 2 149 7.7E-33 T 01-11-2018 IPR014710 RmlC-like jelly roll fold CDA09_01240 8b4a1b15446e6bbb5a075a97c3fe51dc 226 PRINTS PR00034 CRP bacterial regulatory protein HTH signature 190 205 3.8E-5 T 01-11-2018 IPR012318 Crp-type HTH domain GO:0003677|GO:0006355 CDA09_01240 8b4a1b15446e6bbb5a075a97c3fe51dc 226 PRINTS PR00034 CRP bacterial regulatory protein HTH signature 174 190 3.8E-5 T 01-11-2018 IPR012318 Crp-type HTH domain GO:0003677|GO:0006355 CDA09_01240 8b4a1b15446e6bbb5a075a97c3fe51dc 226 SMART SM00419 168 217 1.3E-11 T 01-11-2018 IPR012318 Crp-type HTH domain GO:0003677|GO:0006355 CDA09_01240 8b4a1b15446e6bbb5a075a97c3fe51dc 226 SUPERFAMILY SSF51206 15 146 7.33E-28 T 01-11-2018 IPR018490 Cyclic nucleotide-binding-like CDA09_01240 8b4a1b15446e6bbb5a075a97c3fe51dc 226 Pfam PF13545 Crp-like helix-turn-helix domain 155 224 6.2E-18 T 01-11-2018 IPR012318 Crp-type HTH domain GO:0003677|GO:0006355 CDA09_12165 4315e1e50969746ea4774ea3fe260ede 298 Gene3D G3DSA:1.10.260.40 25 98 3.3E-16 T 01-11-2018 CDA09_12165 4315e1e50969746ea4774ea3fe260ede 298 Hamap MF_00109 Shikimate kinase [aroK]. 130 297 21.164 T 01-11-2018 IPR000623 Shikimate kinase/Threonine synthase-like 1 KEGG: 00400+2.7.1.71|MetaCyc: PWY-6163 CDA09_12165 4315e1e50969746ea4774ea3fe260ede 298 SUPERFAMILY SSF52540 132 296 1.08E-23 T 01-11-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CDA09_12165 4315e1e50969746ea4774ea3fe260ede 298 PRINTS PR01100 Shikimate kinase family signature 225 242 2.5E-9 T 01-11-2018 CDA09_12165 4315e1e50969746ea4774ea3fe260ede 298 PRINTS PR01100 Shikimate kinase family signature 133 148 2.5E-9 T 01-11-2018 CDA09_12165 4315e1e50969746ea4774ea3fe260ede 298 PRINTS PR01100 Shikimate kinase family signature 157 170 2.5E-9 T 01-11-2018 CDA09_12165 4315e1e50969746ea4774ea3fe260ede 298 PRINTS PR01100 Shikimate kinase family signature 204 213 2.5E-9 T 01-11-2018 CDA09_12165 4315e1e50969746ea4774ea3fe260ede 298 SMART SM00530 29 84 4.9E-13 T 01-11-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 CDA09_12165 4315e1e50969746ea4774ea3fe260ede 298 Pfam PF01202 Shikimate kinase 139 296 3.2E-34 T 01-11-2018 IPR031322 Shikimate kinase/gluconokinase KEGG: 00400+2.7.1.71|MetaCyc: PWY-6163 CDA09_12165 4315e1e50969746ea4774ea3fe260ede 298 Pfam PF01381 Helix-turn-helix 30 83 2.6E-12 T 01-11-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 CDA09_12165 4315e1e50969746ea4774ea3fe260ede 298 Gene3D G3DSA:3.40.50.300 127 298 8.1E-41 T 01-11-2018 CDA09_12165 4315e1e50969746ea4774ea3fe260ede 298 SUPERFAMILY SSF47413 20 90 6.97E-16 T 01-11-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 CDA09_00870 678e1a90c8edebdb47c5aed5eeec0b2c 373 TIGRFAM TIGR01187 potA: polyamine ABC transporter, ATP-binding protein 46 370 8.3E-114 T 01-11-2018 IPR005893 Spermidine/putrescine ABC transporter, ATP-binding subunit GO:0015417|GO:0015846|GO:0043190 CDA09_00870 678e1a90c8edebdb47c5aed5eeec0b2c 373 Gene3D G3DSA:2.40.50.940 237 294 7.2E-7 T 01-11-2018 CDA09_00870 678e1a90c8edebdb47c5aed5eeec0b2c 373 SUPERFAMILY SSF50331 250 371 2.38E-16 T 01-11-2018 IPR008995 Molybdate/tungstate binding, C-terminal CDA09_00870 678e1a90c8edebdb47c5aed5eeec0b2c 373 Pfam PF00005 ABC transporter 32 175 1.4E-34 T 01-11-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 CDA09_00870 678e1a90c8edebdb47c5aed5eeec0b2c 373 Pfam PF08402 TOBE domain 288 371 3.8E-20 T 01-11-2018 IPR013611 Transport-associated OB, type 2 GO:0005524|GO:0022857|GO:0043190|GO:0055085 CDA09_00870 678e1a90c8edebdb47c5aed5eeec0b2c 373 Gene3D G3DSA:3.40.50.300 15 236 1.1E-64 T 01-11-2018 CDA09_00870 678e1a90c8edebdb47c5aed5eeec0b2c 373 SMART SM00382 40 225 6.7E-16 T 01-11-2018 IPR003593 AAA+ ATPase domain CDA09_00870 678e1a90c8edebdb47c5aed5eeec0b2c 373 SUPERFAMILY SSF52540 16 256 6.19E-83 T 01-11-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CDA09_00870 678e1a90c8edebdb47c5aed5eeec0b2c 373 Gene3D G3DSA:2.40.50.140 295 343 7.2E-7 T 01-11-2018 CDA09_00870 678e1a90c8edebdb47c5aed5eeec0b2c 373 ProSitePatterns PS00211 ABC transporters family signature. 148 162 - T 01-11-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 CDA09_17770 7a407b8ac877097397b857477b4c8e4b 197 SUPERFAMILY SSF52833 39 194 1.43E-49 T 01-11-2018 IPR036249 Thioredoxin-like superfamily CDA09_17770 7a407b8ac877097397b857477b4c8e4b 197 Gene3D G3DSA:3.40.30.10 24 195 2.0E-52 T 01-11-2018 CDA09_17770 7a407b8ac877097397b857477b4c8e4b 197 Pfam PF02630 SCO1/SenC 35 173 1.4E-37 T 01-11-2018 IPR003782 Copper chaperone SCO1/SenC Reactome: R-HSA-5628897|Reactome: R-HSA-611105 CDA09_10895 d0e780356797e1f2fe3d6954137e72f3 175 SMART SM00989 106 174 9.7E-5 T 01-11-2018 IPR004096 4-vinyl reductase, 4VR CDA09_10895 d0e780356797e1f2fe3d6954137e72f3 175 Gene3D G3DSA:3.30.1380.20 11 156 2.2E-6 T 01-11-2018 CDA09_10895 d0e780356797e1f2fe3d6954137e72f3 175 SUPERFAMILY SSF111126 5 143 5.75E-15 T 01-11-2018 IPR024096 NO signalling/Golgi transport ligand-binding domain superfamily CDA09_08620 e64c660cb1de9bf71e7dc6787cc927f1 228 Gene3D G3DSA:3.40.50.850 1 227 5.2E-59 T 01-11-2018 IPR036380 Isochorismatase-like superfamily GO:0003824 CDA09_08620 e64c660cb1de9bf71e7dc6787cc927f1 228 Pfam PF00857 Isochorismatase family 36 215 6.0E-28 T 01-11-2018 IPR000868 Isochorismatase-like GO:0003824 CDA09_08620 e64c660cb1de9bf71e7dc6787cc927f1 228 SUPERFAMILY SSF52499 11 223 2.88E-45 T 01-11-2018 IPR036380 Isochorismatase-like superfamily GO:0003824 CDA09_09455 5a0faf783d0040b1539f9bb855fb239c 710 Gene3D G3DSA:3.40.50.720 406 545 1.8E-31 T 01-11-2018 CDA09_09455 5a0faf783d0040b1539f9bb855fb239c 710 Pfam PF00724 NADH:flavin oxidoreductase / NADH oxidase family 12 365 1.8E-71 T 01-11-2018 IPR001155 NADH:flavin oxidoreductase/NADH oxidase, N-terminal GO:0010181|GO:0016491|GO:0055114 CDA09_09455 5a0faf783d0040b1539f9bb855fb239c 710 Gene3D G3DSA:3.50.50.60 546 700 1.7E-17 T 01-11-2018 IPR036188 FAD/NAD(P)-binding domain superfamily CDA09_09455 5a0faf783d0040b1539f9bb855fb239c 710 SUPERFAMILY SSF51395 4 396 1.81E-105 T 01-11-2018 CDA09_09455 5a0faf783d0040b1539f9bb855fb239c 710 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 574 599 8.2E-17 T 01-11-2018 CDA09_09455 5a0faf783d0040b1539f9bb855fb239c 710 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 410 432 8.2E-17 T 01-11-2018 CDA09_09455 5a0faf783d0040b1539f9bb855fb239c 710 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 659 673 8.2E-17 T 01-11-2018 CDA09_09455 5a0faf783d0040b1539f9bb855fb239c 710 Gene3D G3DSA:3.20.20.70 2 405 7.7E-122 T 01-11-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 CDA09_09455 5a0faf783d0040b1539f9bb855fb239c 710 SUPERFAMILY SSF51905 388 707 8.26E-43 T 01-11-2018 IPR036188 FAD/NAD(P)-binding domain superfamily CDA09_09455 5a0faf783d0040b1539f9bb855fb239c 710 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 410 686 1.3E-35 T 01-11-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 CDA09_09455 5a0faf783d0040b1539f9bb855fb239c 710 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 574 592 3.9E-16 T 01-11-2018 CDA09_09455 5a0faf783d0040b1539f9bb855fb239c 710 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 658 674 3.9E-16 T 01-11-2018 CDA09_09455 5a0faf783d0040b1539f9bb855fb239c 710 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 411 430 3.9E-16 T 01-11-2018 CDA09_20495 0da5cb8bf8ce1a47a2bad13805e69291 1043 Pfam PF00873 AcrB/AcrD/AcrF family 6 1025 4.5E-253 T 01-11-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 CDA09_20495 0da5cb8bf8ce1a47a2bad13805e69291 1043 SUPERFAMILY SSF82866 804 1028 8.63E-52 T 01-11-2018 CDA09_20495 0da5cb8bf8ce1a47a2bad13805e69291 1043 Gene3D G3DSA:3.30.2090.10 716 810 1.8E-264 T 01-11-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains CDA09_20495 0da5cb8bf8ce1a47a2bad13805e69291 1043 Gene3D G3DSA:3.30.70.1320 133 323 1.8E-264 T 01-11-2018 CDA09_20495 0da5cb8bf8ce1a47a2bad13805e69291 1043 SUPERFAMILY SSF82866 291 497 3.92E-31 T 01-11-2018 CDA09_20495 0da5cb8bf8ce1a47a2bad13805e69291 1043 TIGRFAM TIGR00914 2A0601: heavy metal efflux pump, CzcA family 1 1026 4.6E-292 T 01-11-2018 IPR004763 Cation efflux system CzcA/CusA/SilA/NccA/HelA/CnrA GO:0006812|GO:0008324|GO:0016021 CDA09_20495 0da5cb8bf8ce1a47a2bad13805e69291 1043 PRINTS PR00702 Acriflavin resistance protein family signature 329 352 2.3E-22 T 01-11-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 CDA09_20495 0da5cb8bf8ce1a47a2bad13805e69291 1043 PRINTS PR00702 Acriflavin resistance protein family signature 356 377 2.3E-22 T 01-11-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 CDA09_20495 0da5cb8bf8ce1a47a2bad13805e69291 1043 PRINTS PR00702 Acriflavin resistance protein family signature 12 36 2.3E-22 T 01-11-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 CDA09_20495 0da5cb8bf8ce1a47a2bad13805e69291 1043 PRINTS PR00702 Acriflavin resistance protein family signature 545 562 2.3E-22 T 01-11-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 CDA09_20495 0da5cb8bf8ce1a47a2bad13805e69291 1043 PRINTS PR00702 Acriflavin resistance protein family signature 471 494 2.3E-22 T 01-11-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 CDA09_20495 0da5cb8bf8ce1a47a2bad13805e69291 1043 PRINTS PR00702 Acriflavin resistance protein family signature 40 58 2.3E-22 T 01-11-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 CDA09_20495 0da5cb8bf8ce1a47a2bad13805e69291 1043 SUPERFAMILY SSF82693 137 323 3.14E-15 T 01-11-2018 CDA09_20495 0da5cb8bf8ce1a47a2bad13805e69291 1043 Gene3D G3DSA:1.20.1640.10 511 1022 1.8E-264 T 01-11-2018 CDA09_20495 0da5cb8bf8ce1a47a2bad13805e69291 1043 SUPERFAMILY SSF82693 46 127 1.62E-19 T 01-11-2018 CDA09_20495 0da5cb8bf8ce1a47a2bad13805e69291 1043 SUPERFAMILY SSF82693 559 654 5.76E-9 T 01-11-2018 CDA09_20495 0da5cb8bf8ce1a47a2bad13805e69291 1043 Gene3D G3DSA:3.30.70.1430 562 664 1.8E-264 T 01-11-2018 CDA09_20495 0da5cb8bf8ce1a47a2bad13805e69291 1043 SUPERFAMILY SSF82714 181 263 4.19E-12 T 01-11-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains CDA09_20495 0da5cb8bf8ce1a47a2bad13805e69291 1043 Gene3D G3DSA:3.30.70.1440 665 868 1.8E-264 T 01-11-2018 CDA09_20495 0da5cb8bf8ce1a47a2bad13805e69291 1043 Gene3D G3DSA:3.30.70.1430 42 818 1.8E-264 T 01-11-2018 CDA09_20495 0da5cb8bf8ce1a47a2bad13805e69291 1043 SUPERFAMILY SSF82714 716 806 2.75E-14 T 01-11-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains CDA09_20495 0da5cb8bf8ce1a47a2bad13805e69291 1043 Gene3D G3DSA:1.20.1640.10 14 510 1.8E-264 T 01-11-2018 CDA09_20495 0da5cb8bf8ce1a47a2bad13805e69291 1043 Gene3D G3DSA:3.30.2090.10 178 269 1.8E-264 T 01-11-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains CDA09_20075 d7e561fc349e6e99da5f173ee6039774 308 Pfam PF01497 Periplasmic binding protein 53 277 3.3E-30 T 01-11-2018 IPR002491 ABC transporter periplasmic binding domain CDA09_20075 d7e561fc349e6e99da5f173ee6039774 308 Gene3D G3DSA:3.40.50.1980 49 167 2.8E-38 T 01-11-2018 CDA09_20075 d7e561fc349e6e99da5f173ee6039774 308 SUPERFAMILY SSF53807 32 297 7.46E-66 T 01-11-2018 CDA09_20075 d7e561fc349e6e99da5f173ee6039774 308 Gene3D G3DSA:3.40.50.1980 171 300 4.4E-32 T 01-11-2018 CDA09_22645 646e99576de5bc5fa118bbf2ac31692c 305 Gene3D G3DSA:3.30.420.40 135 276 1.5E-65 T 01-11-2018 CDA09_22645 646e99576de5bc5fa118bbf2ac31692c 305 TIGRFAM TIGR03192 benz_CoA_bzdQ: benzoyl-CoA reductase, bzd-type, Q subunit 11 301 3.0E-203 T 01-11-2018 IPR017605 Benzoyl-CoA reductase, bzd-type, Q subunit CDA09_22645 646e99576de5bc5fa118bbf2ac31692c 305 SUPERFAMILY SSF53067 43 295 3.41E-28 T 01-11-2018 CDA09_22645 646e99576de5bc5fa118bbf2ac31692c 305 Gene3D G3DSA:3.30.420.40 44 293 1.5E-65 T 01-11-2018 CDA09_22645 646e99576de5bc5fa118bbf2ac31692c 305 Pfam PF01869 BadF/BadG/BcrA/BcrD ATPase family 44 294 4.3E-57 T 01-11-2018 IPR002731 ATPase, BadF/BadG/BcrA/BcrD type Reactome: R-HSA-446210 CDA09_22645 646e99576de5bc5fa118bbf2ac31692c 305 TIGRFAM TIGR00241 CoA_E_activ: putative CoA-substrate-specific enzyme activase 41 292 1.4E-67 T 01-11-2018 IPR008275 CoA enzyme activase CDA09_15865 eab1613c8db3875ed7d3edd02f52f11c 237 Gene3D G3DSA:3.20.20.410 1 232 3.1E-63 T 01-11-2018 IPR036520 UPF0759 superfamily CDA09_15865 eab1613c8db3875ed7d3edd02f52f11c 237 Pfam PF01904 Protein of unknown function DUF72 20 228 2.0E-56 T 01-11-2018 IPR002763 Protein of unknown function DUF72 CDA09_15865 eab1613c8db3875ed7d3edd02f52f11c 237 SUPERFAMILY SSF117396 1 229 3.66E-69 T 01-11-2018 IPR036520 UPF0759 superfamily CDA09_02785 641b822079645ea3610e0039687fad33 578 Pfam PF00749 tRNA synthetases class I (E and Q), catalytic domain 36 350 1.8E-99 T 01-11-2018 IPR020058 Glutamyl/glutaminyl-tRNA synthetase, class Ib, catalytic domain GO:0004812|GO:0005524|GO:0043039 CDA09_02785 641b822079645ea3610e0039687fad33 578 Gene3D G3DSA:2.40.240.10 361 478 1.5E-43 T 01-11-2018 IPR020056 Ribosomal protein L25/Gln-tRNA synthetase, N-terminal Reactome: R-HSA-2408517|Reactome: R-HSA-379716 CDA09_02785 641b822079645ea3610e0039687fad33 578 Gene3D G3DSA:3.40.50.620 37 256 5.5E-102 T 01-11-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold CDA09_02785 641b822079645ea3610e0039687fad33 578 Gene3D G3DSA:1.10.1160.10 274 352 3.4E-30 T 01-11-2018 IPR020061 Glutamine-tRNA ligase, alpha-bundle domain superfamily GO:0005524 CDA09_02785 641b822079645ea3610e0039687fad33 578 TIGRFAM TIGR00440 glnS: glutamine--tRNA ligase 36 575 8.9E-213 T 01-11-2018 IPR004514 Glutamine-tRNA synthetase GO:0000166|GO:0004819|GO:0005524|GO:0005737|GO:0006425 KEGG: 00970+6.1.1.18|Reactome: R-HSA-2408517|Reactome: R-HSA-379716|Reactome: R-HSA-379726 CDA09_02785 641b822079645ea3610e0039687fad33 578 SUPERFAMILY SSF52374 19 350 3.44E-94 T 01-11-2018 CDA09_02785 641b822079645ea3610e0039687fad33 578 SUPERFAMILY SSF50715 353 572 1.31E-69 T 01-11-2018 IPR011035 Ribosomal protein L25/Gln-tRNA synthetase, anti-codon-binding domain superfamily GO:0006412 Reactome: R-HSA-2408517|Reactome: R-HSA-379716 CDA09_02785 641b822079645ea3610e0039687fad33 578 Gene3D G3DSA:3.90.800.10 109 217 5.5E-102 T 01-11-2018 CDA09_02785 641b822079645ea3610e0039687fad33 578 Gene3D G3DSA:2.40.240.10 479 573 7.2E-30 T 01-11-2018 IPR020056 Ribosomal protein L25/Gln-tRNA synthetase, N-terminal Reactome: R-HSA-2408517|Reactome: R-HSA-379716 CDA09_02785 641b822079645ea3610e0039687fad33 578 Hamap MF_00126 Glutamine--tRNA ligase [glnS]. 1 573 52.146 T 01-11-2018 IPR022861 Glutamine-tRNA ligase, bacterial GO:0004819 KEGG: 00970+6.1.1.18 CDA09_02785 641b822079645ea3610e0039687fad33 578 PRINTS PR00987 Glutamyl-tRNA synthetase signature 218 228 1.4E-9 T 01-11-2018 IPR000924 Glutamyl/glutaminyl-tRNA synthetase GO:0000166|GO:0004812|GO:0005524|GO:0005737|GO:0043039 CDA09_02785 641b822079645ea3610e0039687fad33 578 PRINTS PR00987 Glutamyl-tRNA synthetase signature 39 51 1.4E-9 T 01-11-2018 IPR000924 Glutamyl/glutaminyl-tRNA synthetase GO:0000166|GO:0004812|GO:0005524|GO:0005737|GO:0043039 CDA09_02785 641b822079645ea3610e0039687fad33 578 PRINTS PR00987 Glutamyl-tRNA synthetase signature 53 64 1.4E-9 T 01-11-2018 IPR000924 Glutamyl/glutaminyl-tRNA synthetase GO:0000166|GO:0004812|GO:0005524|GO:0005737|GO:0043039 CDA09_02785 641b822079645ea3610e0039687fad33 578 PRINTS PR00987 Glutamyl-tRNA synthetase signature 68 81 1.4E-9 T 01-11-2018 IPR000924 Glutamyl/glutaminyl-tRNA synthetase GO:0000166|GO:0004812|GO:0005524|GO:0005737|GO:0043039 CDA09_02785 641b822079645ea3610e0039687fad33 578 Pfam PF03950 tRNA synthetases class I (E and Q), anti-codon binding domain 353 552 4.6E-53 T 01-11-2018 IPR020059 Glutamyl/glutaminyl-tRNA synthetase, class Ib, anti-codon binding domain GO:0000166|GO:0004812|GO:0005524|GO:0005737|GO:0006418 Reactome: R-HSA-2408517|Reactome: R-HSA-379716 CDA09_18135 28c573fb6a89f934df39240946bf2358 519 Gene3D G3DSA:3.30.450.40 353 513 5.5E-17 T 01-11-2018 IPR029016 GAF-like domain superfamily CDA09_18135 28c573fb6a89f934df39240946bf2358 519 Gene3D G3DSA:1.10.3210.10 50 271 6.7E-38 T 01-11-2018 CDA09_18135 28c573fb6a89f934df39240946bf2358 519 Pfam PF01590 GAF domain 368 509 7.1E-6 T 01-11-2018 IPR003018 GAF domain GO:0005515 CDA09_18135 28c573fb6a89f934df39240946bf2358 519 Pfam PF08668 HDOD domain 55 241 8.5E-31 T 01-11-2018 IPR013976 Metal-dependent hydrolase HDOD CDA09_18135 28c573fb6a89f934df39240946bf2358 519 SUPERFAMILY SSF55781 368 509 2.62E-14 T 01-11-2018 CDA09_18135 28c573fb6a89f934df39240946bf2358 519 SUPERFAMILY SSF109604 50 298 2.48E-40 T 01-11-2018 CDA09_07850 fcd5f4efe008dc08f98f49d049686fbb 279 SMART SM01049 17 102 4.0E-8 T 01-11-2018 IPR033480 Single Cache domain 2 CDA09_07850 fcd5f4efe008dc08f98f49d049686fbb 279 SMART SM01049 151 231 0.17 T 01-11-2018 IPR033480 Single Cache domain 2 CDA09_07850 fcd5f4efe008dc08f98f49d049686fbb 279 Gene3D G3DSA:3.30.450.20 23 148 1.6E-14 T 01-11-2018 CDA09_07850 fcd5f4efe008dc08f98f49d049686fbb 279 Gene3D G3DSA:3.30.450.20 151 279 7.2E-15 T 01-11-2018 CDA09_07850 fcd5f4efe008dc08f98f49d049686fbb 279 Pfam PF08269 Cache domain 55 278 2.9E-22 T 01-11-2018 IPR004010 Double Cache domain 2 CDA09_14955 7ec9bb95270a584f7db2280746a5d36a 107 TIGRFAM TIGR00049 TIGR00049: iron-sulfur cluster assembly accessory protein 3 107 1.3E-37 T 01-11-2018 IPR016092 FeS cluster insertion protein GO:0005198|GO:0051536|GO:0097428 Reactome: R-HSA-1362409 CDA09_14955 7ec9bb95270a584f7db2280746a5d36a 107 ProSitePatterns PS01152 Hypothetical hesB/yadR/yfhF family signature. 88 105 - T 01-11-2018 IPR017870 FeS cluster insertion, C-terminal, conserved site Reactome: R-HSA-1362409 CDA09_14955 7ec9bb95270a584f7db2280746a5d36a 107 Pfam PF01521 Iron-sulphur cluster biosynthesis 1 103 8.8E-27 T 01-11-2018 IPR000361 FeS cluster biogenesis Reactome: R-HSA-1362409 CDA09_14955 7ec9bb95270a584f7db2280746a5d36a 107 SUPERFAMILY SSF89360 1 96 1.44E-32 T 01-11-2018 IPR035903 HesB-like domain superfamily Reactome: R-HSA-1362409 CDA09_14955 7ec9bb95270a584f7db2280746a5d36a 107 TIGRFAM TIGR02011 IscA: iron-sulfur cluster assembly protein IscA 3 107 2.4E-57 T 01-11-2018 IPR011302 Iron-binding protein IscA, proteobacteria GO:0005506|GO:0051536|GO:0097428 CDA09_14955 7ec9bb95270a584f7db2280746a5d36a 107 Gene3D G3DSA:2.60.300.12 2 107 1.3E-38 T 01-11-2018 IPR035903 HesB-like domain superfamily Reactome: R-HSA-1362409 CDA09_03640 942f191f6087c18824e28b5b017cd4ae 178 Gene3D G3DSA:2.30.110.20 1 178 8.0E-59 T 01-11-2018 IPR036624 Hcp1-like superfamily CDA09_03640 942f191f6087c18824e28b5b017cd4ae 178 SUPERFAMILY SSF141452 1 173 3.92E-41 T 01-11-2018 IPR036624 Hcp1-like superfamily CDA09_03640 942f191f6087c18824e28b5b017cd4ae 178 Pfam PF05638 Type VI secretion system effector, Hcp 5 149 3.3E-38 T 01-11-2018 IPR008514 Type VI secretion system effector, Hcp CDA09_03640 942f191f6087c18824e28b5b017cd4ae 178 TIGRFAM TIGR03344 VI_effect_Hcp1: type VI secretion system effector, Hcp1 family 9 158 9.6E-25 T 01-11-2018 IPR008514 Type VI secretion system effector, Hcp CDA09_00545 79c55147bedad4b2703032cc371d8846 273 Pfam PF13230 Glutamine amidotransferases class-II 1 263 1.0E-123 T 01-11-2018 IPR026869 Putative glutamine amidotransferase type 2 CDA09_00545 79c55147bedad4b2703032cc371d8846 273 Gene3D G3DSA:3.60.20.10 1 258 2.8E-93 T 01-11-2018 IPR029055 Nucleophile aminohydrolases, N-terminal CDA09_00545 79c55147bedad4b2703032cc371d8846 273 SUPERFAMILY SSF56235 2 253 1.43E-45 T 01-11-2018 IPR029055 Nucleophile aminohydrolases, N-terminal CDA09_04990 5a6b819cd43d812e27a5077cec46b469 309 ProSitePatterns PS01021 Coproporphyrinogen III oxidase signature. 170 194 - T 01-11-2018 IPR018375 Coproporphyrinogen III oxidase, conserved site GO:0004109|GO:0006779|GO:0055114 KEGG: 00860+1.3.3.3|MetaCyc: PWY-7159|Reactome: R-HSA-189451 CDA09_04990 5a6b819cd43d812e27a5077cec46b469 309 SUPERFAMILY SSF102886 4 309 8.11E-131 T 01-11-2018 IPR036406 Oxygen-dependent coproporphyrinogen III oxidase superfamily GO:0004109|GO:0006779|GO:0055114 KEGG: 00860+1.3.3.3|MetaCyc: PWY-7159|Reactome: R-HSA-189451 CDA09_04990 5a6b819cd43d812e27a5077cec46b469 309 PRINTS PR00073 Coprogen oxidase signature 166 195 2.9E-84 T 01-11-2018 IPR001260 Coproporphyrinogen III oxidase, aerobic GO:0004109|GO:0006779|GO:0055114 KEGG: 00860+1.3.3.3|MetaCyc: PWY-7159|Reactome: R-HSA-189451 CDA09_04990 5a6b819cd43d812e27a5077cec46b469 309 PRINTS PR00073 Coprogen oxidase signature 47 68 2.9E-84 T 01-11-2018 IPR001260 Coproporphyrinogen III oxidase, aerobic GO:0004109|GO:0006779|GO:0055114 KEGG: 00860+1.3.3.3|MetaCyc: PWY-7159|Reactome: R-HSA-189451 CDA09_04990 5a6b819cd43d812e27a5077cec46b469 309 PRINTS PR00073 Coprogen oxidase signature 269 295 2.9E-84 T 01-11-2018 IPR001260 Coproporphyrinogen III oxidase, aerobic GO:0004109|GO:0006779|GO:0055114 KEGG: 00860+1.3.3.3|MetaCyc: PWY-7159|Reactome: R-HSA-189451 CDA09_04990 5a6b819cd43d812e27a5077cec46b469 309 PRINTS PR00073 Coprogen oxidase signature 89 113 2.9E-84 T 01-11-2018 IPR001260 Coproporphyrinogen III oxidase, aerobic GO:0004109|GO:0006779|GO:0055114 KEGG: 00860+1.3.3.3|MetaCyc: PWY-7159|Reactome: R-HSA-189451 CDA09_04990 5a6b819cd43d812e27a5077cec46b469 309 PRINTS PR00073 Coprogen oxidase signature 30 46 2.9E-84 T 01-11-2018 IPR001260 Coproporphyrinogen III oxidase, aerobic GO:0004109|GO:0006779|GO:0055114 KEGG: 00860+1.3.3.3|MetaCyc: PWY-7159|Reactome: R-HSA-189451 CDA09_04990 5a6b819cd43d812e27a5077cec46b469 309 PRINTS PR00073 Coprogen oxidase signature 128 150 2.9E-84 T 01-11-2018 IPR001260 Coproporphyrinogen III oxidase, aerobic GO:0004109|GO:0006779|GO:0055114 KEGG: 00860+1.3.3.3|MetaCyc: PWY-7159|Reactome: R-HSA-189451 CDA09_04990 5a6b819cd43d812e27a5077cec46b469 309 PRINTS PR00073 Coprogen oxidase signature 241 268 2.9E-84 T 01-11-2018 IPR001260 Coproporphyrinogen III oxidase, aerobic GO:0004109|GO:0006779|GO:0055114 KEGG: 00860+1.3.3.3|MetaCyc: PWY-7159|Reactome: R-HSA-189451 CDA09_04990 5a6b819cd43d812e27a5077cec46b469 309 Hamap MF_00333 Oxygen-dependent coproporphyrinogen-III oxidase [hemF]. 3 284 51.98 T 01-11-2018 IPR001260 Coproporphyrinogen III oxidase, aerobic GO:0004109|GO:0006779|GO:0055114 KEGG: 00860+1.3.3.3|MetaCyc: PWY-7159|Reactome: R-HSA-189451 CDA09_04990 5a6b819cd43d812e27a5077cec46b469 309 Pfam PF01218 Coproporphyrinogen III oxidase 9 308 1.0E-125 T 01-11-2018 IPR001260 Coproporphyrinogen III oxidase, aerobic GO:0004109|GO:0006779|GO:0055114 KEGG: 00860+1.3.3.3|MetaCyc: PWY-7159|Reactome: R-HSA-189451 CDA09_04990 5a6b819cd43d812e27a5077cec46b469 309 PIRSF PIRSF000166 2 309 7.9E-122 T 01-11-2018 IPR001260 Coproporphyrinogen III oxidase, aerobic GO:0004109|GO:0006779|GO:0055114 KEGG: 00860+1.3.3.3|MetaCyc: PWY-7159|Reactome: R-HSA-189451 CDA09_04990 5a6b819cd43d812e27a5077cec46b469 309 Gene3D G3DSA:3.40.1500.10 1 309 4.6E-127 T 01-11-2018 IPR036406 Oxygen-dependent coproporphyrinogen III oxidase superfamily GO:0004109|GO:0006779|GO:0055114 KEGG: 00860+1.3.3.3|MetaCyc: PWY-7159|Reactome: R-HSA-189451 CDA09_12050 f97bc7d1a92d618cf9e43af7e902167c 177 Gene3D G3DSA:3.10.310.50 16 174 1.2E-39 T 01-11-2018 CDA09_12050 f97bc7d1a92d618cf9e43af7e902167c 177 Pfam PF04536 TPM domain 25 150 5.2E-15 T 01-11-2018 IPR007621 TPM domain CDA09_13635 2d9c935551b69635cddcb389f5c88db8 411 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 5 303 2.1E-60 T 01-11-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 CDA09_13635 2d9c935551b69635cddcb389f5c88db8 411 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 146 171 8.2E-17 T 01-11-2018 CDA09_13635 2d9c935551b69635cddcb389f5c88db8 411 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 5 27 8.2E-17 T 01-11-2018 CDA09_13635 2d9c935551b69635cddcb389f5c88db8 411 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 272 279 8.2E-17 T 01-11-2018 CDA09_13635 2d9c935551b69635cddcb389f5c88db8 411 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 233 247 8.2E-17 T 01-11-2018 CDA09_13635 2d9c935551b69635cddcb389f5c88db8 411 SUPERFAMILY SSF55424 315 406 1.37E-23 T 01-11-2018 IPR016156 FAD/NAD-linked reductase, dimerisation domain superfamily GO:0016491|GO:0050660|GO:0055114 CDA09_13635 2d9c935551b69635cddcb389f5c88db8 411 Gene3D G3DSA:3.50.50.60 7 310 5.4E-103 T 01-11-2018 IPR036188 FAD/NAD(P)-binding domain superfamily CDA09_13635 2d9c935551b69635cddcb389f5c88db8 411 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 101 119 1.1E-22 T 01-11-2018 CDA09_13635 2d9c935551b69635cddcb389f5c88db8 411 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 6 25 1.1E-22 T 01-11-2018 CDA09_13635 2d9c935551b69635cddcb389f5c88db8 411 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 146 164 1.1E-22 T 01-11-2018 CDA09_13635 2d9c935551b69635cddcb389f5c88db8 411 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 232 248 1.1E-22 T 01-11-2018 CDA09_13635 2d9c935551b69635cddcb389f5c88db8 411 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 257 279 1.1E-22 T 01-11-2018 CDA09_13635 2d9c935551b69635cddcb389f5c88db8 411 Pfam PF14759 Reductase C-terminal 322 404 5.8E-24 T 01-11-2018 IPR028202 Reductase, C-terminal CDA09_13635 2d9c935551b69635cddcb389f5c88db8 411 Gene3D G3DSA:3.30.390.30 322 407 1.9E-27 T 01-11-2018 IPR016156 FAD/NAD-linked reductase, dimerisation domain superfamily GO:0016491|GO:0050660|GO:0055114 CDA09_13635 2d9c935551b69635cddcb389f5c88db8 411 SUPERFAMILY SSF51905 5 192 3.83E-45 T 01-11-2018 IPR036188 FAD/NAD(P)-binding domain superfamily CDA09_13635 2d9c935551b69635cddcb389f5c88db8 411 Gene3D G3DSA:3.50.50.60 114 239 5.4E-103 T 01-11-2018 IPR036188 FAD/NAD(P)-binding domain superfamily CDA09_13635 2d9c935551b69635cddcb389f5c88db8 411 SUPERFAMILY SSF51905 142 315 1.11E-27 T 01-11-2018 IPR036188 FAD/NAD(P)-binding domain superfamily CDA09_01460 12be015e53f29916102883e29f1f10bc 386 SUPERFAMILY SSF101898 102 367 4.45E-42 T 01-11-2018 CDA09_01460 12be015e53f29916102883e29f1f10bc 386 Pfam PF17170 6-bladed beta-propeller 198 276 1.4E-8 T 01-11-2018 CDA09_01460 12be015e53f29916102883e29f1f10bc 386 Gene3D G3DSA:2.120.10.30 85 227 2.3E-22 T 01-11-2018 IPR011042 Six-bladed beta-propeller, TolB-like CDA09_01460 12be015e53f29916102883e29f1f10bc 386 Gene3D G3DSA:2.120.10.30 228 378 6.0E-38 T 01-11-2018 IPR011042 Six-bladed beta-propeller, TolB-like CDA09_00495 09efd7a7babd6db084dc0e68e85f6364 466 TIGRFAM TIGR01039 atpD: ATP synthase F1, beta subunit 3 465 2.8E-250 T 01-11-2018 IPR005722 ATP synthase, F1 complex, beta subunit GO:0015986|GO:0045261|GO:0046933 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980|Reactome: R-HSA-1268020|Reactome: R-HSA-163210|Reactome: R-HSA-2151201|Reactome: R-HSA-8949613 CDA09_00495 09efd7a7babd6db084dc0e68e85f6364 466 Gene3D G3DSA:3.40.50.300 81 349 5.4E-111 T 01-11-2018 CDA09_00495 09efd7a7babd6db084dc0e68e85f6364 466 Pfam PF00006 ATP synthase alpha/beta family, nucleotide-binding domain 135 347 1.4E-62 T 01-11-2018 IPR000194 ATPase, F1/V1/A1 complex, alpha/beta subunit, nucleotide-binding domain GO:0005524 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980 CDA09_00495 09efd7a7babd6db084dc0e68e85f6364 466 SUPERFAMILY SSF52540 82 353 7.03E-89 T 01-11-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CDA09_00495 09efd7a7babd6db084dc0e68e85f6364 466 Gene3D G3DSA:2.40.10.170 1 80 2.7E-27 T 01-11-2018 CDA09_00495 09efd7a7babd6db084dc0e68e85f6364 466 SMART SM00382 147 332 0.0011 T 01-11-2018 IPR003593 AAA+ ATPase domain CDA09_00495 09efd7a7babd6db084dc0e68e85f6364 466 Gene3D G3DSA:1.10.1140.10 350 466 2.5E-59 T 01-11-2018 IPR024034 ATPase, F1/V1 complex, beta/alpha subunit, C-terminal KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980 CDA09_00495 09efd7a7babd6db084dc0e68e85f6364 466 Hamap MF_01347 ATP synthase subunit beta [atpB]. 1 465 56.379 T 01-11-2018 IPR005722 ATP synthase, F1 complex, beta subunit GO:0015986|GO:0045261|GO:0046933 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980|Reactome: R-HSA-1268020|Reactome: R-HSA-163210|Reactome: R-HSA-2151201|Reactome: R-HSA-8949613 CDA09_00495 09efd7a7babd6db084dc0e68e85f6364 466 ProSitePatterns PS00152 ATP synthase alpha and beta subunits signature. 338 347 - T 01-11-2018 IPR020003 ATPase, alpha/beta subunit, nucleotide-binding domain, active site GO:0005524 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980 CDA09_00495 09efd7a7babd6db084dc0e68e85f6364 466 SUPERFAMILY SSF47917 350 465 4.97E-55 T 01-11-2018 CDA09_00495 09efd7a7babd6db084dc0e68e85f6364 466 SUPERFAMILY SSF50615 1 80 1.78E-23 T 01-11-2018 IPR036121 ATPase, F1/V1/A1 complex, alpha/beta subunit, N-terminal domain superfamily GO:0046034|GO:1902600 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980 CDA09_00495 09efd7a7babd6db084dc0e68e85f6364 466 Pfam PF02874 ATP synthase alpha/beta family, beta-barrel domain 6 78 1.6E-17 T 01-11-2018 IPR004100 ATPase, F1/V1/A1 complex, alpha/beta subunit, N-terminal domain GO:0046034|GO:1902600 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980 CDA09_00655 0945ddbda8f5117d95f8eb67921a2e5a 1030 Pfam PF01568 Molydopterin dinucleotide binding domain 908 970 1.9E-12 T 01-11-2018 IPR006657 Molybdopterin dinucleotide-binding domain GO:0016491|GO:0043546|GO:0055114 CDA09_00655 0945ddbda8f5117d95f8eb67921a2e5a 1030 SMART SM00926 66 150 8.4E-15 T 01-11-2018 IPR006963 Molybdopterin oxidoreductase, 4Fe-4S domain GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 CDA09_00655 0945ddbda8f5117d95f8eb67921a2e5a 1030 Gene3D G3DSA:2.20.25.90 62 108 5.8E-6 T 01-11-2018 CDA09_00655 0945ddbda8f5117d95f8eb67921a2e5a 1030 Pfam PF00384 Molybdopterin oxidoreductase 275 684 1.0E-10 T 01-11-2018 IPR006656 Molybdopterin oxidoreductase GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 CDA09_00655 0945ddbda8f5117d95f8eb67921a2e5a 1030 SUPERFAMILY SSF50692 885 1009 1.58E-21 T 01-11-2018 IPR009010 Aspartate decarboxylase-like domain superfamily CDA09_00655 0945ddbda8f5117d95f8eb67921a2e5a 1030 Gene3D G3DSA:3.40.50.740 576 699 6.4E-11 T 01-11-2018 CDA09_00655 0945ddbda8f5117d95f8eb67921a2e5a 1030 ProSitePatterns PS00551 Prokaryotic molybdopterin oxidoreductases signature 1. 71 88 - T 01-11-2018 IPR027467 Molybdopterin oxidoreductase, molybdopterin cofactor binding site GO:0051539 CDA09_00655 0945ddbda8f5117d95f8eb67921a2e5a 1030 SUPERFAMILY SSF53706 65 869 3.27E-110 T 01-11-2018 CDA09_00655 0945ddbda8f5117d95f8eb67921a2e5a 1030 Gene3D G3DSA:2.40.40.20 860 1003 2.3E-18 T 01-11-2018 CDA09_19155 e43d506284c213689ce6ee6a0cce50b0 128 SUPERFAMILY SSF88723 1 128 2.72E-21 T 01-11-2018 IPR029060 PIN-like domain superfamily CDA09_19155 e43d506284c213689ce6ee6a0cce50b0 128 Pfam PF01850 PIN domain 3 118 1.4E-13 T 01-11-2018 IPR002716 PIN domain CDA09_19155 e43d506284c213689ce6ee6a0cce50b0 128 Gene3D G3DSA:3.40.50.1010 1 125 2.9E-12 T 01-11-2018 CDA09_18230 747cc3cdc0744d91690760109473649a 147 Gene3D G3DSA:2.40.330.20 1 136 2.1E-37 T 01-11-2018 IPR038619 MraZ superfamily CDA09_18230 747cc3cdc0744d91690760109473649a 147 TIGRFAM TIGR00242 TIGR00242: division/cell wall cluster transcriptional repressor MraZ 1 128 9.8E-36 T 01-11-2018 IPR003444 Transcriptional regulator MraZ GO:0003700|GO:0006355 CDA09_18230 747cc3cdc0744d91690760109473649a 147 SUPERFAMILY SSF89447 1 133 5.13E-40 T 01-11-2018 IPR037914 SpoVT-AbrB domain superfamily CDA09_18230 747cc3cdc0744d91690760109473649a 147 Pfam PF02381 MraZ protein, putative antitoxin-like 78 130 4.0E-12 T 01-11-2018 IPR020603 MraZ domain CDA09_18230 747cc3cdc0744d91690760109473649a 147 Pfam PF02381 MraZ protein, putative antitoxin-like 1 73 1.4E-13 T 01-11-2018 IPR020603 MraZ domain CDA09_18230 747cc3cdc0744d91690760109473649a 147 ProDom PD006745 MRAZ YABB DIVISION CELL 3D-STRUCTURE UNCHARACTERIZED BCR SIMILAR PROTEIN 1 128 2.0E-56 T 01-11-2018 IPR003444 Transcriptional regulator MraZ GO:0003700|GO:0006355 CDA09_18230 747cc3cdc0744d91690760109473649a 147 Hamap MF_01008 Transcriptional regulator MraZ [mraZ]. 1 147 47.688 T 01-11-2018 IPR003444 Transcriptional regulator MraZ GO:0003700|GO:0006355 CDA09_02665 c75aee59f3fa0143739108708c13f539 282 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 16 27 8.7E-6 T 01-11-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 CDA09_02665 c75aee59f3fa0143739108708c13f539 282 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 27 37 8.7E-6 T 01-11-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 CDA09_02665 c75aee59f3fa0143739108708c13f539 282 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 37 48 8.7E-6 T 01-11-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 CDA09_02665 c75aee59f3fa0143739108708c13f539 282 SUPERFAMILY SSF53850 82 281 4.03E-34 T 01-11-2018 CDA09_02665 c75aee59f3fa0143739108708c13f539 282 Gene3D G3DSA:1.10.10.10 1 88 3.0E-23 T 01-11-2018 IPR036388 Winged helix-like DNA-binding domain superfamily CDA09_02665 c75aee59f3fa0143739108708c13f539 282 Pfam PF03466 LysR substrate binding domain 81 281 2.3E-31 T 01-11-2018 IPR005119 LysR, substrate-binding CDA09_02665 c75aee59f3fa0143739108708c13f539 282 Gene3D G3DSA:3.40.190.10 94 277 6.1E-42 T 01-11-2018 CDA09_02665 c75aee59f3fa0143739108708c13f539 282 SUPERFAMILY SSF46785 3 105 6.07E-21 T 01-11-2018 IPR036390 Winged helix DNA-binding domain superfamily CDA09_02665 c75aee59f3fa0143739108708c13f539 282 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 2 60 1.7E-19 T 01-11-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 CDA09_02665 c75aee59f3fa0143739108708c13f539 282 Gene3D G3DSA:3.40.190.10 154 250 6.1E-42 T 01-11-2018 CDA09_09105 43405c8aa2502cf2593826c1607012cf 291 ProSitePatterns PS00383 Tyrosine specific protein phosphatases active site. 178 188 - T 01-11-2018 IPR016130 Protein-tyrosine phosphatase, active site GO:0004725|GO:0016311 CDA09_09105 43405c8aa2502cf2593826c1607012cf 291 Gene3D G3DSA:3.90.190.10 40 290 3.5E-59 T 01-11-2018 IPR029021 Protein-tyrosine phosphatase-like CDA09_09105 43405c8aa2502cf2593826c1607012cf 291 Pfam PF13350 Tyrosine phosphatase family 41 291 3.2E-63 T 01-11-2018 IPR026893 Tyrosine/serine-protein phosphatase IphP-type CDA09_09105 43405c8aa2502cf2593826c1607012cf 291 SUPERFAMILY SSF52799 41 290 9.1E-50 T 01-11-2018 IPR029021 Protein-tyrosine phosphatase-like CDA09_10570 d74c5173eaf4f3f0f75f3af1f4a5cb22 389 SUPERFAMILY SSF51395 3 375 2.56E-98 T 01-11-2018 CDA09_10570 d74c5173eaf4f3f0f75f3af1f4a5cb22 389 ProSitePatterns PS00557 FMN-dependent alpha-hydroxy acid dehydrogenases active site. 273 279 - T 01-11-2018 IPR008259 FMN-dependent alpha-hydroxy acid dehydrogenase, active site GO:0016491|GO:0055114 Reactome: R-HSA-9033241 CDA09_10570 d74c5173eaf4f3f0f75f3af1f4a5cb22 389 PIRSF PIRSF000138 1 379 8.4E-132 T 01-11-2018 IPR012133 Alpha-hydroxy acid dehydrogenase, FMN-dependent GO:0010181|GO:0016491|GO:0055114 Reactome: R-HSA-9033241 CDA09_10570 d74c5173eaf4f3f0f75f3af1f4a5cb22 389 Gene3D G3DSA:3.20.20.70 2 380 1.8E-133 T 01-11-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 CDA09_10570 d74c5173eaf4f3f0f75f3af1f4a5cb22 389 Pfam PF01070 FMN-dependent dehydrogenase 12 376 1.7E-129 T 01-11-2018 IPR000262 FMN-dependent dehydrogenase GO:0016491 Reactome: R-HSA-9033241 CDA09_20055 b4a08f8fd6e151a9237f9f1148b87934 488 Gene3D G3DSA:3.40.50.880 254 394 1.0E-16 T 01-11-2018 IPR029062 Class I glutamine amidotransferase-like CDA09_20055 b4a08f8fd6e151a9237f9f1148b87934 488 Gene3D G3DSA:3.40.50.300 6 237 5.2E-57 T 01-11-2018 CDA09_20055 b4a08f8fd6e151a9237f9f1148b87934 488 TIGRFAM TIGR00313 cobQ: cobyric acid synthase CobQ 7 480 3.5E-145 T 01-11-2018 IPR004459 Cobyric acid synthase CobQ GO:0003824|GO:0009236 CDA09_20055 b4a08f8fd6e151a9237f9f1148b87934 488 SUPERFAMILY SSF52317 255 447 3.99E-39 T 01-11-2018 IPR029062 Class I glutamine amidotransferase-like CDA09_20055 b4a08f8fd6e151a9237f9f1148b87934 488 SUPERFAMILY SSF52540 6 238 1.46E-57 T 01-11-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CDA09_20055 b4a08f8fd6e151a9237f9f1148b87934 488 Pfam PF07685 CobB/CobQ-like glutamine amidotransferase domain 257 437 1.9E-56 T 01-11-2018 IPR011698 CobB/CobQ-like glutamine amidotransferase GO:0003824|GO:0009236 CDA09_20055 b4a08f8fd6e151a9237f9f1148b87934 488 Hamap MF_00028 Cobyric acid synthase [cobQ]. 1 488 210.609 T 01-11-2018 IPR004459 Cobyric acid synthase CobQ GO:0003824|GO:0009236 CDA09_20055 b4a08f8fd6e151a9237f9f1148b87934 488 Pfam PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain 7 232 6.1E-24 T 01-11-2018 IPR002586 CobQ/CobB/MinD/ParA nucleotide binding domain CDA09_12460 6d6bb631ade9a35ec37906b15fdb258f 151 Gene3D G3DSA:2.60.40.1890 27 141 8.1E-37 T 01-11-2018 IPR036182 Copper chaperone PCuAC superfamily CDA09_12460 6d6bb631ade9a35ec37906b15fdb258f 151 SUPERFAMILY SSF110087 5 136 9.81E-43 T 01-11-2018 IPR036182 Copper chaperone PCuAC superfamily CDA09_12460 6d6bb631ade9a35ec37906b15fdb258f 151 Pfam PF04314 Copper chaperone PCu(A)C 24 124 6.9E-36 T 01-11-2018 IPR007410 Copper chaperone PCuAC CDA09_01010 9f48534dd5de6223beb32ee935bfaf73 321 Pfam PF13557 Putative MetA-pathway of phenol degradation 138 296 6.6E-9 T 01-11-2018 IPR025737 MetA-pathway of phenol degradation, putative CDA09_19515 7799f758863960403e51e2ba7e001a13 101 Hamap MF_01369_B 50S ribosomal protein L23 [rplW]. 10 100 21.537 T 01-11-2018 IPR013025 Ribosomal protein L25/L23 GO:0003735|GO:0005840|GO:0006412 CDA09_19515 7799f758863960403e51e2ba7e001a13 101 SUPERFAMILY SSF54189 5 95 1.29E-28 T 01-11-2018 IPR012678 Ribosomal protein L23/L15e core domain superfamily GO:0003735|GO:0005622|GO:0005840|GO:0006412 CDA09_19515 7799f758863960403e51e2ba7e001a13 101 Gene3D G3DSA:3.30.70.330 4 101 3.1E-33 T 01-11-2018 IPR012677 Nucleotide-binding alpha-beta plait domain superfamily CDA09_19515 7799f758863960403e51e2ba7e001a13 101 Pfam PF00276 Ribosomal protein L23 11 97 9.4E-29 T 01-11-2018 IPR013025 Ribosomal protein L25/L23 GO:0003735|GO:0005840|GO:0006412 CDA09_00270 28c7f4e98bc5c59e9e93f0b7c94ebc95 317 ProSitePatterns PS00373 Phosphoribosylglycinamide formyltransferase active site. 138 161 - T 01-11-2018 IPR001555 Phosphoribosylglycinamide formyltransferase, active site KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 CDA09_00270 28c7f4e98bc5c59e9e93f0b7c94ebc95 317 Pfam PF00551 Formyl transferase 7 185 1.2E-41 T 01-11-2018 IPR002376 Formyl transferase, N-terminal GO:0009058|GO:0016742 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 CDA09_00270 28c7f4e98bc5c59e9e93f0b7c94ebc95 317 TIGRFAM TIGR00460 fmt: methionyl-tRNA formyltransferase 6 306 1.4E-87 T 01-11-2018 IPR005794 Methionyl-tRNA formyltransferase GO:0004479|GO:0071951 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9|Reactome: R-HSA-5368286 CDA09_00270 28c7f4e98bc5c59e9e93f0b7c94ebc95 317 SUPERFAMILY SSF50486 210 312 5.81E-31 T 01-11-2018 IPR011034 Formyl transferase-like, C-terminal domain superfamily GO:0003824 CDA09_00270 28c7f4e98bc5c59e9e93f0b7c94ebc95 317 Hamap MF_00182 Methionyl-tRNA formyltransferase [fmt]. 6 307 36.199 T 01-11-2018 IPR005794 Methionyl-tRNA formyltransferase GO:0004479|GO:0071951 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9|Reactome: R-HSA-5368286 CDA09_00270 28c7f4e98bc5c59e9e93f0b7c94ebc95 317 Gene3D G3DSA:3.40.50.170 1 211 1.4E-78 T 01-11-2018 CDA09_00270 28c7f4e98bc5c59e9e93f0b7c94ebc95 317 SUPERFAMILY SSF53328 5 209 1.7E-65 T 01-11-2018 IPR036477 Formyl transferase, N-terminal domain superfamily GO:0009058|GO:0016742 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 CDA09_00270 28c7f4e98bc5c59e9e93f0b7c94ebc95 317 Pfam PF02911 Formyl transferase, C-terminal domain 209 304 5.6E-26 T 01-11-2018 IPR005793 Formyl transferase, C-terminal GO:0009058|GO:0016742 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 CDA09_00270 28c7f4e98bc5c59e9e93f0b7c94ebc95 317 Gene3D G3DSA:3.10.25.10 212 311 2.9E-28 T 01-11-2018 IPR037022 Formyl transferase, C-terminal domain superfamily GO:0009058|GO:0016742 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 CDA09_22230 2d7268c2263128af0dc4d385a0259e6c 364 Pfam PF00633 Helix-hairpin-helix motif 104 132 1.2E-6 T 01-11-2018 IPR000445 Helix-hairpin-helix motif GO:0003677 Reactome: R-HSA-110357 CDA09_22230 2d7268c2263128af0dc4d385a0259e6c 364 SUPERFAMILY SSF55811 224 350 9.43E-25 T 01-11-2018 IPR015797 NUDIX hydrolase-like domain superfamily GO:0016787 CDA09_22230 2d7268c2263128af0dc4d385a0259e6c 364 ProSitePatterns PS01155 Endonuclease III family signature. 106 135 - T 01-11-2018 IPR004036 Endonuclease III-like, conserved site-2 Reactome: R-HSA-110357 CDA09_22230 2d7268c2263128af0dc4d385a0259e6c 364 Gene3D G3DSA:3.90.79.10 236 353 7.2E-18 T 01-11-2018 CDA09_22230 2d7268c2263128af0dc4d385a0259e6c 364 ProSitePatterns PS00764 Endonuclease III iron-sulfur binding region signature. 196 212 - T 01-11-2018 IPR004035 Endonuclease III, iron-sulphur binding site Reactome: R-HSA-110330|Reactome: R-HSA-110331|Reactome: R-HSA-110357 CDA09_22230 2d7268c2263128af0dc4d385a0259e6c 364 Gene3D G3DSA:1.10.1670.10 13 214 2.1E-86 T 01-11-2018 IPR023170 Helix-turn-helix, base-excision DNA repair, C-terminal Reactome: R-HSA-110357 CDA09_22230 2d7268c2263128af0dc4d385a0259e6c 364 Pfam PF00730 HhH-GPD superfamily base excision DNA repair protein 40 171 2.2E-19 T 01-11-2018 IPR003265 HhH-GPD domain GO:0006284 Reactome: R-HSA-110357 CDA09_22230 2d7268c2263128af0dc4d385a0259e6c 364 Pfam PF10576 Iron-sulfur binding domain of endonuclease III 196 212 5.4E-4 T 01-11-2018 IPR003651 Endonuclease III-like, iron-sulphur cluster loop motif GO:0051539 Reactome: R-HSA-110357 CDA09_22230 2d7268c2263128af0dc4d385a0259e6c 364 SMART SM00478 43 194 1.3E-42 T 01-11-2018 IPR003265 HhH-GPD domain GO:0006284 Reactome: R-HSA-110357 CDA09_22230 2d7268c2263128af0dc4d385a0259e6c 364 Gene3D G3DSA:1.10.340.30 25 136 2.1E-86 T 01-11-2018 CDA09_22230 2d7268c2263128af0dc4d385a0259e6c 364 TIGRFAM TIGR01084 mutY: A/G-specific adenine glycosylase 10 272 8.1E-103 T 01-11-2018 IPR005760 A/G-specific adenine glycosylase MutY GO:0006284|GO:0019104 CDA09_22230 2d7268c2263128af0dc4d385a0259e6c 364 Pfam PF14815 NUDIX domain 239 348 1.9E-25 T 01-11-2018 IPR029119 MutY, C-terminal Reactome: R-HSA-110330|Reactome: R-HSA-110331|Reactome: R-HSA-110357 CDA09_22230 2d7268c2263128af0dc4d385a0259e6c 364 SUPERFAMILY SSF48150 9 228 4.4E-73 T 01-11-2018 IPR011257 DNA glycosylase GO:0003824|GO:0006281 Reactome: R-HSA-110357 CDA09_18930 6407aca822d21c2d38fac8ce1f35e6fc 235 Pfam PF01557 Fumarylacetoacetate (FAA) hydrolase family 27 231 9.3E-49 T 01-11-2018 IPR011234 Fumarylacetoacetase-like, C-terminal GO:0003824 CDA09_18930 6407aca822d21c2d38fac8ce1f35e6fc 235 SUPERFAMILY SSF56529 23 232 9.16E-65 T 01-11-2018 IPR036663 Fumarylacetoacetase-like, C-terminal domain superfamily GO:0003824 CDA09_18930 6407aca822d21c2d38fac8ce1f35e6fc 235 Gene3D G3DSA:3.90.850.10 6 234 8.5E-81 T 01-11-2018 IPR036663 Fumarylacetoacetase-like, C-terminal domain superfamily GO:0003824 CDA09_03115 9f4ccfaa57b6ae8f952fbc8d56adb938 108 PRINTS PR00606 Class ID cytochrome C signature 97 107 9.3E-9 T 01-11-2018 IPR002324 Cytochrome c, class ID GO:0005506|GO:0009055|GO:0020037 CDA09_03115 9f4ccfaa57b6ae8f952fbc8d56adb938 108 PRINTS PR00606 Class ID cytochrome C signature 30 43 9.3E-9 T 01-11-2018 IPR002324 Cytochrome c, class ID GO:0005506|GO:0009055|GO:0020037 CDA09_03115 9f4ccfaa57b6ae8f952fbc8d56adb938 108 PRINTS PR00606 Class ID cytochrome C signature 45 58 9.3E-9 T 01-11-2018 IPR002324 Cytochrome c, class ID GO:0005506|GO:0009055|GO:0020037 CDA09_03115 9f4ccfaa57b6ae8f952fbc8d56adb938 108 Pfam PF00034 Cytochrome c 33 108 1.4E-6 T 01-11-2018 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 Reactome: R-HSA-111457|Reactome: R-HSA-111458|Reactome: R-HSA-111459|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 CDA09_03115 9f4ccfaa57b6ae8f952fbc8d56adb938 108 Gene3D G3DSA:1.10.760.10 21 108 9.4E-26 T 01-11-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 CDA09_03115 9f4ccfaa57b6ae8f952fbc8d56adb938 108 SUPERFAMILY SSF46626 31 108 2.17E-11 T 01-11-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 CDA09_00220 ed4a75143dfb8bd9d42351dcf199ed86 406 SUPERFAMILY SSF103473 7 394 6.15E-49 T 01-11-2018 IPR036259 MFS transporter superfamily CDA09_00220 ed4a75143dfb8bd9d42351dcf199ed86 406 Pfam PF07690 Major Facilitator Superfamily 20 359 2.8E-26 T 01-11-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 CDA09_00220 ed4a75143dfb8bd9d42351dcf199ed86 406 Gene3D G3DSA:1.20.1250.20 4 199 7.2E-20 T 01-11-2018 CDA09_00220 ed4a75143dfb8bd9d42351dcf199ed86 406 Gene3D G3DSA:1.20.1250.20 217 397 1.2E-13 T 01-11-2018 CDA09_10960 11cdab282c388fb3dbf46f6c6f542d20 438 Pfam PF09298 Fumarylacetoacetase N-terminal 29 130 6.1E-24 T 01-11-2018 IPR015377 Fumarylacetoacetase, N-terminal GO:0004334|GO:0009072 KEGG: 00350+3.7.1.2|KEGG: 00643+3.7.1.2|Reactome: R-HSA-71182 CDA09_10960 11cdab282c388fb3dbf46f6c6f542d20 438 SUPERFAMILY SSF63433 13 130 1.15E-32 T 01-11-2018 IPR036462 Fumarylacetoacetase, N-terminal domain superfamily GO:0004334|GO:0009072 KEGG: 00350+3.7.1.2|KEGG: 00643+3.7.1.2|Reactome: R-HSA-71182 CDA09_10960 11cdab282c388fb3dbf46f6c6f542d20 438 TIGRFAM TIGR01266 fum_ac_acetase: fumarylacetoacetase 14 437 1.4E-165 T 01-11-2018 IPR005959 Fumarylacetoacetase GO:0004334|GO:0009072 KEGG: 00350+3.7.1.2|KEGG: 00643+3.7.1.2|Reactome: R-HSA-71182 CDA09_10960 11cdab282c388fb3dbf46f6c6f542d20 438 SUPERFAMILY SSF56529 132 436 1.57E-96 T 01-11-2018 IPR036663 Fumarylacetoacetase-like, C-terminal domain superfamily GO:0003824 CDA09_10960 11cdab282c388fb3dbf46f6c6f542d20 438 Pfam PF01557 Fumarylacetoacetate (FAA) hydrolase family 136 433 7.3E-54 T 01-11-2018 IPR011234 Fumarylacetoacetase-like, C-terminal GO:0003824 CDA09_10960 11cdab282c388fb3dbf46f6c6f542d20 438 Gene3D G3DSA:2.30.30.230 1 127 9.8E-36 T 01-11-2018 IPR036462 Fumarylacetoacetase, N-terminal domain superfamily GO:0004334|GO:0009072 KEGG: 00350+3.7.1.2|KEGG: 00643+3.7.1.2|Reactome: R-HSA-71182 CDA09_10960 11cdab282c388fb3dbf46f6c6f542d20 438 Gene3D G3DSA:3.90.850.10 128 437 2.1E-119 T 01-11-2018 IPR036663 Fumarylacetoacetase-like, C-terminal domain superfamily GO:0003824 CDA09_10490 19508635e316084b220bda80fb4d5acb 251 SUPERFAMILY SSF47240 9 245 1.14E-85 T 01-11-2018 IPR009078 Ferritin-like superfamily CDA09_10490 19508635e316084b220bda80fb4d5acb 251 PIRSF PIRSF037834 4 251 1.6E-101 T 01-11-2018 IPR011882 1,2-phenylacetyl-CoA epoxidase, subunit C GO:0010124 CDA09_10490 19508635e316084b220bda80fb4d5acb 251 Pfam PF05138 Phenylacetic acid catabolic protein 8 251 2.5E-100 T 01-11-2018 IPR007814 1,2-phenylacetyl-CoA epoxidase, subunit A/C GO:0010124 CDA09_10490 19508635e316084b220bda80fb4d5acb 251 TIGRFAM TIGR02158 PA_CoA_Oxy3: phenylacetate-CoA oxygenase, PaaI subunit 13 251 1.5E-88 T 01-11-2018 IPR011882 1,2-phenylacetyl-CoA epoxidase, subunit C GO:0010124 CDA09_10490 19508635e316084b220bda80fb4d5acb 251 Gene3D G3DSA:1.20.1260.10 3 251 4.5E-101 T 01-11-2018 IPR012347 Ferritin-like CDA09_14630 8d42ce3b2d9f1437216530153dd1331f 145 SUPERFAMILY SSF82114 7 132 2.32E-32 T 01-11-2018 IPR023465 Riboflavin kinase domain superfamily GO:0008531|GO:0009231 Reactome: R-HSA-196843 CDA09_14630 8d42ce3b2d9f1437216530153dd1331f 145 Pfam PF01982 Domain of unknown function DUF120 14 131 4.3E-28 T 01-11-2018 IPR023602 Riboflavin kinase domain, CTP-dependent GO:0016773 KEGG: 00740+2.7.1.161|MetaCyc: PWY-6167 CDA09_14630 8d42ce3b2d9f1437216530153dd1331f 145 Gene3D G3DSA:2.40.30.30 5 139 3.2E-30 T 01-11-2018 IPR023465 Riboflavin kinase domain superfamily GO:0008531|GO:0009231 Reactome: R-HSA-196843 CDA09_15200 0425a4b89fdbf78eeabdcfc21a20e620 251 Pfam PF03740 Pyridoxal phosphate biosynthesis protein PdxJ 3 243 2.6E-91 T 01-11-2018 IPR004569 Pyridoxal phosphate (active vitamin B6) biosynthesis PdxJ GO:0005737|GO:0008615|GO:0033856 KEGG: 00750+2.6.99.2 CDA09_15200 0425a4b89fdbf78eeabdcfc21a20e620 251 Hamap MF_00279 Pyridoxine 5'-phosphate synthase [pdxJ]. 1 248 114.545 T 01-11-2018 IPR004569 Pyridoxal phosphate (active vitamin B6) biosynthesis PdxJ GO:0005737|GO:0008615|GO:0033856 KEGG: 00750+2.6.99.2 CDA09_15200 0425a4b89fdbf78eeabdcfc21a20e620 251 Gene3D G3DSA:3.20.20.70 1 250 2.8E-95 T 01-11-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 CDA09_15200 0425a4b89fdbf78eeabdcfc21a20e620 251 TIGRFAM TIGR00559 pdxJ: pyridoxine 5'-phosphate synthase 4 244 4.1E-86 T 01-11-2018 IPR004569 Pyridoxal phosphate (active vitamin B6) biosynthesis PdxJ GO:0005737|GO:0008615|GO:0033856 KEGG: 00750+2.6.99.2 CDA09_15200 0425a4b89fdbf78eeabdcfc21a20e620 251 SUPERFAMILY SSF63892 2 245 1.26E-86 T 01-11-2018 IPR036130 Pyridoxine 5'-phosphate synthase GO:0005737|GO:0008615|GO:0033856 KEGG: 00750+2.6.99.2 CDA09_19410 0eb0235334d967030c47e1d3de9345c3 120 Gene3D G3DSA:4.10.910.10 72 117 5.8E-26 T 01-11-2018 IPR027437 30s ribosomal protein S13, C-terminal Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 CDA09_19410 0eb0235334d967030c47e1d3de9345c3 120 Gene3D G3DSA:1.10.8.50 1 71 8.4E-29 T 01-11-2018 CDA09_19410 0eb0235334d967030c47e1d3de9345c3 120 SUPERFAMILY SSF46946 2 114 8.07E-46 T 01-11-2018 IPR010979 Ribosomal protein S13-like, H2TH GO:0003676 CDA09_19410 0eb0235334d967030c47e1d3de9345c3 120 ProSitePatterns PS00646 Ribosomal protein S13 signature. 87 100 - T 01-11-2018 IPR018269 Ribosomal protein S13, conserved site GO:0003723|GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 CDA09_19410 0eb0235334d967030c47e1d3de9345c3 120 PIRSF PIRSF002134 1 120 5.3E-43 T 01-11-2018 IPR001892 Ribosomal protein S13 GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 CDA09_19410 0eb0235334d967030c47e1d3de9345c3 120 Pfam PF00416 Ribosomal protein S13/S18 3 108 2.6E-32 T 01-11-2018 IPR001892 Ribosomal protein S13 GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 CDA09_19410 0eb0235334d967030c47e1d3de9345c3 120 Hamap MF_01315 30S ribosomal protein S13 [rpsM]. 1 118 27.526 T 01-11-2018 IPR001892 Ribosomal protein S13 GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 CDA09_19410 0eb0235334d967030c47e1d3de9345c3 120 TIGRFAM TIGR03631 uS13_bact: ribosomal protein uS13 3 114 1.0E-53 T 01-11-2018 IPR019980 Ribosomal protein S13, bacterial-type GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 CDA09_15585 97add49218125eb46b9c1c801527cac0 99 Gene3D G3DSA:1.10.760.10 24 96 6.0E-17 T 01-11-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 CDA09_15585 97add49218125eb46b9c1c801527cac0 99 SUPERFAMILY SSF46626 25 87 8.7E-11 T 01-11-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 CDA09_15585 97add49218125eb46b9c1c801527cac0 99 Pfam PF13442 Cytochrome C oxidase, cbb3-type, subunit III 25 87 4.0E-16 T 01-11-2018 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 Reactome: R-HSA-111457|Reactome: R-HSA-111458|Reactome: R-HSA-111459|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 CDA09_05030 0b6d5a4a14db694da108b654f43a0330 334 SUPERFAMILY SSF56112 5 327 3.06E-58 T 01-11-2018 IPR011009 Protein kinase-like domain superfamily CDA09_05030 0b6d5a4a14db694da108b654f43a0330 334 Gene3D G3DSA:3.30.200.20 1 92 1.3E-21 T 01-11-2018 CDA09_05030 0b6d5a4a14db694da108b654f43a0330 334 Pfam PF01636 Phosphotransferase enzyme family 22 246 3.1E-31 T 01-11-2018 IPR002575 Aminoglycoside phosphotransferase CDA09_05030 0b6d5a4a14db694da108b654f43a0330 334 Gene3D G3DSA:3.90.1200.10 93 330 5.0E-77 T 01-11-2018 CDA09_20490 56f064668559a7dde8a41c3b0ac87737 330 TIGRFAM TIGR01730 RND_mfp: efflux transporter, RND family, MFP subunit 16 316 3.4E-45 T 01-11-2018 IPR006143 RND efflux pump, membrane fusion protein GO:0005215|GO:0016020|GO:0055085 CDA09_20490 56f064668559a7dde8a41c3b0ac87737 330 Gene3D G3DSA:2.40.30.170 15 252 7.3E-75 T 01-11-2018 CDA09_20490 56f064668559a7dde8a41c3b0ac87737 330 SUPERFAMILY SSF111369 30 250 2.48E-22 T 01-11-2018 CDA09_20490 56f064668559a7dde8a41c3b0ac87737 330 Gene3D G3DSA:2.40.50.100 29 172 7.3E-75 T 01-11-2018 CDA09_20490 56f064668559a7dde8a41c3b0ac87737 330 Gene3D G3DSA:1.10.287.470 63 134 7.3E-75 T 01-11-2018 CDA09_20490 56f064668559a7dde8a41c3b0ac87737 330 Pfam PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion 19 246 1.2E-39 T 01-11-2018 IPR032317 RND efflux pump, membrane fusion protein, barrel-sandwich domain CDA09_20490 56f064668559a7dde8a41c3b0ac87737 330 Gene3D G3DSA:2.40.420.20 13 311 7.3E-75 T 01-11-2018 CDA09_11310 3a0b22f73a5c0647088def85aeacc322 393 PIRSF PIRSF016817 3 385 2.0E-86 T 01-11-2018 IPR016677 Uncharacterised conserved protein UCP016817, ATP-dependent carboligase CDA09_11310 3a0b22f73a5c0647088def85aeacc322 393 SUPERFAMILY SSF56059 108 300 3.03E-17 T 01-11-2018 CDA09_11310 3a0b22f73a5c0647088def85aeacc322 393 Gene3D G3DSA:3.30.1490.350 126 172 5.5E-13 T 01-11-2018 CDA09_11310 3a0b22f73a5c0647088def85aeacc322 393 Pfam PF02655 ATP-grasp domain 112 264 7.9E-18 T 01-11-2018 IPR003806 ATP-grasp fold, DUF201-type GO:0005524|GO:0046872 CDA09_11310 3a0b22f73a5c0647088def85aeacc322 393 Gene3D G3DSA:3.30.470.20 113 268 5.5E-13 T 01-11-2018 CDA09_05365 4f817a612f15b2ddfa9459e0c9f679f6 361 TIGRFAM TIGR00034 aroFGH: 3-deoxy-7-phosphoheptulonate synthase 10 353 3.8E-164 T 01-11-2018 IPR006219 DHAP synthase, class 1 GO:0003849|GO:0009073 KEGG: 00400+2.5.1.54|MetaCyc: PWY-6164 CDA09_05365 4f817a612f15b2ddfa9459e0c9f679f6 361 SUPERFAMILY SSF51569 11 352 1.57E-136 T 01-11-2018 CDA09_05365 4f817a612f15b2ddfa9459e0c9f679f6 361 Gene3D G3DSA:3.20.20.70 5 354 2.0E-161 T 01-11-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 CDA09_05365 4f817a612f15b2ddfa9459e0c9f679f6 361 PIRSF PIRSF001361 2 356 7.1E-159 T 01-11-2018 IPR006219 DHAP synthase, class 1 GO:0003849|GO:0009073 KEGG: 00400+2.5.1.54|MetaCyc: PWY-6164 CDA09_05365 4f817a612f15b2ddfa9459e0c9f679f6 361 Pfam PF00793 DAHP synthetase I family 43 342 5.9E-103 T 01-11-2018 IPR006218 DAHP synthetase I/KDSA GO:0009058 KEGG: 00540+2.5.1.55|MetaCyc: PWY-1269|MetaCyc: PWY-7674 CDA09_15115 b19c37ac8c90b1dbeb1ce64be2d6bb5b 346 SUPERFAMILY SSF52540 25 291 1.58E-35 T 01-11-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CDA09_15115 b19c37ac8c90b1dbeb1ce64be2d6bb5b 346 TIGRFAM TIGR02782 TrbB_P: P-type conjugative transfer ATPase TrbB 15 315 7.3E-123 T 01-11-2018 IPR014149 Conjugative transfer, TrbB GO:0000746|GO:0005737 CDA09_15115 b19c37ac8c90b1dbeb1ce64be2d6bb5b 346 Gene3D G3DSA:3.40.50.300 125 322 2.7E-53 T 01-11-2018 CDA09_15115 b19c37ac8c90b1dbeb1ce64be2d6bb5b 346 Gene3D G3DSA:3.30.450.90 21 124 3.4E-13 T 01-11-2018 CDA09_15115 b19c37ac8c90b1dbeb1ce64be2d6bb5b 346 Pfam PF00437 Type II/IV secretion system protein 29 294 1.5E-78 T 01-11-2018 IPR001482 Type II/IV secretion system protein CDA09_15075 9b7eb88e76e48249d66a6bf5a18416c5 500 Pfam PF00665 Integrase core domain 129 253 9.4E-15 T 01-11-2018 IPR001584 Integrase, catalytic core GO:0015074 CDA09_15075 9b7eb88e76e48249d66a6bf5a18416c5 500 Pfam PF13384 Homeodomain-like domain 14 47 5.5E-6 T 01-11-2018 CDA09_08330 fd85b468cc4c0fefac0da2b3b31a144b 434 SUPERFAMILY SSF54373 182 284 4.71E-23 T 01-11-2018 CDA09_08330 fd85b468cc4c0fefac0da2b3b31a144b 434 Gene3D G3DSA:3.30.9.90 69 387 3.8E-66 T 01-11-2018 CDA09_08330 fd85b468cc4c0fefac0da2b3b31a144b 434 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 153 168 2.4E-6 T 01-11-2018 CDA09_08330 fd85b468cc4c0fefac0da2b3b31a144b 434 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 6 28 2.4E-6 T 01-11-2018 CDA09_08330 fd85b468cc4c0fefac0da2b3b31a144b 434 Gene3D G3DSA:3.50.50.60 5 364 3.8E-66 T 01-11-2018 IPR036188 FAD/NAD(P)-binding domain superfamily CDA09_08330 fd85b468cc4c0fefac0da2b3b31a144b 434 Pfam PF01494 FAD binding domain 5 331 7.6E-11 T 01-11-2018 IPR002938 FAD-binding domain GO:0071949 CDA09_08330 fd85b468cc4c0fefac0da2b3b31a144b 434 SUPERFAMILY SSF51905 1 378 1.25E-45 T 01-11-2018 IPR036188 FAD/NAD(P)-binding domain superfamily CDA09_01900 2c94291dab12bb0baeab9f848a1c670e 88 Pfam PF02597 ThiS family 5 88 7.8E-10 T 01-11-2018 IPR003749 Sulfur carrier ThiS/MoaD-like Reactome: R-HSA-947581 CDA09_01900 2c94291dab12bb0baeab9f848a1c670e 88 SUPERFAMILY SSF54285 2 88 2.99E-15 T 01-11-2018 IPR016155 Molybdopterin synthase/thiamin biosynthesis sulphur carrier, beta-grasp CDA09_01900 2c94291dab12bb0baeab9f848a1c670e 88 Gene3D G3DSA:3.10.20.30 1 88 4.3E-22 T 01-11-2018 IPR012675 Beta-grasp domain superfamily CDA09_20310 2d01ecbe5fb84784887d1d0f698c8551 1557 SUPERFAMILY SSF51395 462 1241 4.07E-264 T 01-11-2018 CDA09_20310 2d01ecbe5fb84784887d1d0f698c8551 1557 SUPERFAMILY SSF69336 1254 1545 4.71E-93 T 01-11-2018 IPR036485 Glutamate synthase, alpha subunit, C-terminal domain superfamily GO:0016491|GO:0055114 CDA09_20310 2d01ecbe5fb84784887d1d0f698c8551 1557 Pfam PF01645 Conserved region in glutamate synthase 815 1205 8.7E-157 T 01-11-2018 IPR002932 Glutamate synthase domain GO:0006537|GO:0015930|GO:0016638|GO:0055114 CDA09_20310 2d01ecbe5fb84784887d1d0f698c8551 1557 Gene3D G3DSA:2.160.20.60 1258 1556 2.5E-110 T 01-11-2018 IPR036485 Glutamate synthase, alpha subunit, C-terminal domain superfamily GO:0016491|GO:0055114 CDA09_20310 2d01ecbe5fb84784887d1d0f698c8551 1557 Pfam PF00310 Glutamine amidotransferases class-II 19 442 2.6E-185 T 01-11-2018 IPR017932 Glutamine amidotransferase type 2 domain CDA09_20310 2d01ecbe5fb84784887d1d0f698c8551 1557 Gene3D G3DSA:3.20.20.70 456 798 7.3E-124 T 01-11-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 CDA09_20310 2d01ecbe5fb84784887d1d0f698c8551 1557 Pfam PF01493 GXGXG motif 1285 1469 3.8E-81 T 01-11-2018 IPR002489 Glutamate synthase, alpha subunit, C-terminal GO:0016491|GO:0055114 CDA09_20310 2d01ecbe5fb84784887d1d0f698c8551 1557 Gene3D G3DSA:3.60.20.10 19 452 1.3E-182 T 01-11-2018 IPR029055 Nucleophile aminohydrolases, N-terminal CDA09_20310 2d01ecbe5fb84784887d1d0f698c8551 1557 Pfam PF04898 Glutamate synthase central domain 471 754 8.0E-113 T 01-11-2018 IPR006982 Glutamate synthase, central-N GO:0006807|GO:0015930|GO:0055114 CDA09_20310 2d01ecbe5fb84784887d1d0f698c8551 1557 Gene3D G3DSA:3.20.20.70 799 1257 2.8E-206 T 01-11-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 CDA09_20310 2d01ecbe5fb84784887d1d0f698c8551 1557 SUPERFAMILY SSF56235 19 444 2.57E-155 T 01-11-2018 IPR029055 Nucleophile aminohydrolases, N-terminal CDA09_07355 7e7532cf0066a1b4d093d2ffbfa5929e 460 TIGRFAM TIGR00797 matE: MATE efflux family protein 24 418 2.8E-73 T 01-11-2018 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: R-HSA-425366 CDA09_07355 7e7532cf0066a1b4d093d2ffbfa5929e 460 PIRSF PIRSF006603 3 457 2.4E-65 T 01-11-2018 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: R-HSA-425366 CDA09_07355 7e7532cf0066a1b4d093d2ffbfa5929e 460 Pfam PF01554 MatE 250 411 1.2E-30 T 01-11-2018 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: R-HSA-425366 CDA09_07355 7e7532cf0066a1b4d093d2ffbfa5929e 460 Pfam PF01554 MatE 24 182 5.6E-30 T 01-11-2018 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: R-HSA-425366 CDA09_20880 f7e857a6c8dc08b8064b4b644a3577bc 322 SUPERFAMILY SSF51735 3 273 2.93E-58 T 01-11-2018 IPR036291 NAD(P)-binding domain superfamily CDA09_20880 f7e857a6c8dc08b8064b4b644a3577bc 322 Pfam PF13460 NAD(P)H-binding 10 207 5.2E-22 T 01-11-2018 IPR016040 NAD(P)-binding domain CDA09_20880 f7e857a6c8dc08b8064b4b644a3577bc 322 Gene3D G3DSA:3.40.50.720 5 286 6.8E-56 T 01-11-2018 CDA09_12910 e33f860cc0b66ae83c7c5b872f017aa6 98 Gene3D G3DSA:3.30.70.100 4 95 1.3E-25 T 01-11-2018 CDA09_12910 e33f860cc0b66ae83c7c5b872f017aa6 98 Pfam PF07045 Domain of unknown function (DUF1330) 6 96 9.3E-26 T 01-11-2018 IPR010753 Domain of unknown function DUF1330 CDA09_12910 e33f860cc0b66ae83c7c5b872f017aa6 98 SUPERFAMILY SSF54909 6 96 1.74E-23 T 01-11-2018 IPR011008 Dimeric alpha-beta barrel CDA09_17940 e1cfc203e01167d7ff0d7117b97f0af2 152 Pfam PF01037 Lrp/AsnC ligand binding domain 69 143 2.1E-19 T 01-11-2018 IPR019887 Transcription regulator AsnC/Lrp, ligand binding domain CDA09_17940 e1cfc203e01167d7ff0d7117b97f0af2 152 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 30 49 1.2E-12 T 01-11-2018 IPR000485 AsnC-type HTH domain GO:0043565 CDA09_17940 e1cfc203e01167d7ff0d7117b97f0af2 152 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 19 30 1.2E-12 T 01-11-2018 IPR000485 AsnC-type HTH domain GO:0043565 CDA09_17940 e1cfc203e01167d7ff0d7117b97f0af2 152 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 3 19 1.2E-12 T 01-11-2018 IPR000485 AsnC-type HTH domain GO:0043565 CDA09_17940 e1cfc203e01167d7ff0d7117b97f0af2 152 Gene3D G3DSA:3.30.70.920 56 140 1.1E-21 T 01-11-2018 CDA09_17940 e1cfc203e01167d7ff0d7117b97f0af2 152 SUPERFAMILY SSF46785 2 93 6.26E-19 T 01-11-2018 IPR036390 Winged helix DNA-binding domain superfamily CDA09_17940 e1cfc203e01167d7ff0d7117b97f0af2 152 Pfam PF13412 Winged helix-turn-helix DNA-binding 3 50 2.6E-19 T 01-11-2018 CDA09_17940 e1cfc203e01167d7ff0d7117b97f0af2 152 SUPERFAMILY SSF54909 64 152 3.22E-18 T 01-11-2018 IPR011008 Dimeric alpha-beta barrel CDA09_17940 e1cfc203e01167d7ff0d7117b97f0af2 152 SMART SM00344 3 112 1.3E-38 T 01-11-2018 IPR019888 Transcription regulator AsnC-type GO:0003700|GO:0005622|GO:0006355|GO:0043565 CDA09_17940 e1cfc203e01167d7ff0d7117b97f0af2 152 Gene3D G3DSA:1.10.10.10 4 55 7.1E-24 T 01-11-2018 IPR036388 Winged helix-like DNA-binding domain superfamily CDA09_16495 022f1d275fc54352874be691528002d6 555 ProSitePatterns PS00455 Putative AMP-binding domain signature. 211 222 - T 01-11-2018 IPR020845 AMP-binding, conserved site CDA09_16495 022f1d275fc54352874be691528002d6 555 Pfam PF13193 AMP-binding enzyme C-terminal domain 470 544 1.5E-20 T 01-11-2018 IPR025110 AMP-binding enzyme, C-terminal domain CDA09_16495 022f1d275fc54352874be691528002d6 555 Gene3D G3DSA:3.40.50.12780 13 457 5.2E-115 T 01-11-2018 CDA09_16495 022f1d275fc54352874be691528002d6 555 Gene3D G3DSA:3.30.300.310 458 555 4.2E-31 T 01-11-2018 CDA09_16495 022f1d275fc54352874be691528002d6 555 Pfam PF00501 AMP-binding enzyme 30 461 2.4E-107 T 01-11-2018 IPR000873 AMP-dependent synthetase/ligase GO:0003824 CDA09_16495 022f1d275fc54352874be691528002d6 555 SUPERFAMILY SSF56801 22 552 1.05E-152 T 01-11-2018 CDA09_04155 38c417b7d98f494230cdf32a56e5be70 163 SUPERFAMILY SSF55486 30 158 1.86E-43 T 01-11-2018 CDA09_04155 38c417b7d98f494230cdf32a56e5be70 163 Pfam PF02130 Uncharacterized protein family UPF0054 28 152 6.6E-33 T 01-11-2018 IPR002036 Endoribonuclease YbeY GO:0004222|GO:0006364 CDA09_04155 38c417b7d98f494230cdf32a56e5be70 163 TIGRFAM TIGR00043 TIGR00043: rRNA maturation RNase YbeY 44 153 4.2E-35 T 01-11-2018 IPR002036 Endoribonuclease YbeY GO:0004222|GO:0006364 CDA09_04155 38c417b7d98f494230cdf32a56e5be70 163 Gene3D G3DSA:3.40.390.30 7 162 1.7E-47 T 01-11-2018 IPR023091 Metalloprotease catalytic domain superfamily, predicted GO:0004222 CDA09_04155 38c417b7d98f494230cdf32a56e5be70 163 Hamap MF_00009 Endoribonuclease YbeY [ybeY]. 7 156 22.456 T 01-11-2018 IPR002036 Endoribonuclease YbeY GO:0004222|GO:0006364 CDA09_04155 38c417b7d98f494230cdf32a56e5be70 163 ProSitePatterns PS01306 Uncharacterized protein family UPF0054 signature. 122 132 - T 01-11-2018 IPR020549 Endoribonuclease YbeY, conserved site CDA09_12905 8608fea6089007a10de1ee1f3632071a 332 Gene3D G3DSA:3.40.190.10 28 297 3.6E-122 T 01-11-2018 CDA09_12905 8608fea6089007a10de1ee1f3632071a 332 Gene3D G3DSA:3.40.190.10 115 327 3.6E-122 T 01-11-2018 CDA09_12905 8608fea6089007a10de1ee1f3632071a 332 Pfam PF13531 Bacterial extracellular solute-binding protein 34 280 2.9E-39 T 01-11-2018 CDA09_12905 8608fea6089007a10de1ee1f3632071a 332 SUPERFAMILY SSF53850 23 329 9.52E-83 T 01-11-2018 CDA09_12905 8608fea6089007a10de1ee1f3632071a 332 TIGRFAM TIGR00971 3a0106s03: sulfate ABC transporter, sulfate-binding protein 23 328 1.4E-131 T 01-11-2018 IPR005669 Thiosulphate/Sulfate-binding protein GO:0008272|GO:0015419 CDA09_09140 9daaadc8d3a43673cb0b795116473019 332 Pfam PF00175 Oxidoreductase NAD-binding domain 122 213 4.0E-7 T 01-11-2018 IPR001433 Oxidoreductase FAD/NAD(P)-binding GO:0016491|GO:0055114 CDA09_09140 9daaadc8d3a43673cb0b795116473019 332 PRINTS PR00409 Phthalate dioxygenase reductase family signature 86 100 1.8E-39 T 01-11-2018 IPR000951 Phthalate dioxygenase reductase GO:0016491 CDA09_09140 9daaadc8d3a43673cb0b795116473019 332 PRINTS PR00409 Phthalate dioxygenase reductase family signature 121 140 1.8E-39 T 01-11-2018 IPR000951 Phthalate dioxygenase reductase GO:0016491 CDA09_09140 9daaadc8d3a43673cb0b795116473019 332 PRINTS PR00409 Phthalate dioxygenase reductase family signature 146 155 1.8E-39 T 01-11-2018 IPR000951 Phthalate dioxygenase reductase GO:0016491 CDA09_09140 9daaadc8d3a43673cb0b795116473019 332 PRINTS PR00409 Phthalate dioxygenase reductase family signature 41 51 1.8E-39 T 01-11-2018 IPR000951 Phthalate dioxygenase reductase GO:0016491 CDA09_09140 9daaadc8d3a43673cb0b795116473019 332 PRINTS PR00409 Phthalate dioxygenase reductase family signature 200 208 1.8E-39 T 01-11-2018 IPR000951 Phthalate dioxygenase reductase GO:0016491 CDA09_09140 9daaadc8d3a43673cb0b795116473019 332 PRINTS PR00409 Phthalate dioxygenase reductase family signature 62 76 1.8E-39 T 01-11-2018 IPR000951 Phthalate dioxygenase reductase GO:0016491 CDA09_09140 9daaadc8d3a43673cb0b795116473019 332 ProSitePatterns PS00197 2Fe-2S ferredoxin-type iron-sulfur binding region signature. 281 289 - T 01-11-2018 IPR006058 2Fe-2S ferredoxin, iron-sulphur binding site GO:0051537 CDA09_09140 9daaadc8d3a43673cb0b795116473019 332 Pfam PF00111 2Fe-2S iron-sulfur cluster binding domain 254 321 7.0E-8 T 01-11-2018 IPR001041 2Fe-2S ferredoxin-type iron-sulfur binding domain GO:0009055|GO:0051536 CDA09_09140 9daaadc8d3a43673cb0b795116473019 332 SUPERFAMILY SSF52343 108 237 3.14E-29 T 01-11-2018 IPR039261 Ferredoxin-NADP reductase (FNR), nucleotide-binding domain CDA09_09140 9daaadc8d3a43673cb0b795116473019 332 SUPERFAMILY SSF54292 222 332 7.21E-25 T 01-11-2018 IPR036010 2Fe-2S ferredoxin-like superfamily GO:0009055|GO:0051536 CDA09_09140 9daaadc8d3a43673cb0b795116473019 332 SUPERFAMILY SSF63380 16 110 2.87E-26 T 01-11-2018 IPR017938 Riboflavin synthase-like beta-barrel CDA09_09140 9daaadc8d3a43673cb0b795116473019 332 Gene3D G3DSA:3.10.20.30 236 332 3.6E-21 T 01-11-2018 IPR012675 Beta-grasp domain superfamily CDA09_09140 9daaadc8d3a43673cb0b795116473019 332 Gene3D G3DSA:3.40.50.80 115 232 8.4E-26 T 01-11-2018 IPR039261 Ferredoxin-NADP reductase (FNR), nucleotide-binding domain CDA09_09140 9daaadc8d3a43673cb0b795116473019 332 Gene3D G3DSA:2.40.30.10 11 111 6.5E-28 T 01-11-2018 CDA09_09425 0f67ca3725989065c468b1432870e397 266 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 87 98 4.6E-9 T 01-11-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CDA09_09425 0f67ca3725989065c468b1432870e397 266 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 141 149 4.6E-9 T 01-11-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CDA09_09425 0f67ca3725989065c468b1432870e397 266 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 161 180 4.6E-9 T 01-11-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CDA09_09425 0f67ca3725989065c468b1432870e397 266 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 18 255 7.1E-58 T 01-11-2018 CDA09_09425 0f67ca3725989065c468b1432870e397 266 Gene3D G3DSA:3.40.50.720 3 264 2.1E-77 T 01-11-2018 CDA09_09425 0f67ca3725989065c468b1432870e397 266 SUPERFAMILY SSF51735 10 256 6.53E-75 T 01-11-2018 IPR036291 NAD(P)-binding domain superfamily CDA09_09425 0f67ca3725989065c468b1432870e397 266 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 148 176 - T 01-11-2018 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 CDA09_09425 0f67ca3725989065c468b1432870e397 266 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 161 180 8.3E-30 T 01-11-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CDA09_09425 0f67ca3725989065c468b1432870e397 266 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 182 199 8.3E-30 T 01-11-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CDA09_09425 0f67ca3725989065c468b1432870e397 266 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 217 237 8.3E-30 T 01-11-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CDA09_09425 0f67ca3725989065c468b1432870e397 266 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 87 98 8.3E-30 T 01-11-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CDA09_09425 0f67ca3725989065c468b1432870e397 266 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 135 151 8.3E-30 T 01-11-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CDA09_09425 0f67ca3725989065c468b1432870e397 266 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 13 30 8.3E-30 T 01-11-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CDA09_16700 2cc045cd4c65cb92828a55e658ba969a 88 SUPERFAMILY SSF54285 1 75 2.06E-27 T 01-11-2018 IPR016155 Molybdopterin synthase/thiamin biosynthesis sulphur carrier, beta-grasp CDA09_16700 2cc045cd4c65cb92828a55e658ba969a 88 Gene3D G3DSA:3.10.20.280 1 85 2.0E-31 T 01-11-2018 IPR037021 RnfH superfamily CDA09_16700 2cc045cd4c65cb92828a55e658ba969a 88 Pfam PF03658 RnfH family Ubiquitin 1 83 5.0E-36 T 01-11-2018 IPR005346 RnfH protein CDA09_16700 2cc045cd4c65cb92828a55e658ba969a 88 Hamap MF_00460 Protein RnfH [rnfH]. 1 88 25.07 T 01-11-2018 IPR005346 RnfH protein CDA09_20845 df2c38dba495fa2d6884129b0d3bd052 480 Gene3D G3DSA:1.10.10.1330 123 248 1.1E-20 T 01-11-2018 IPR038709 RNA polymerase sigma-54 factor, core-binding domain superfamily CDA09_20845 df2c38dba495fa2d6884129b0d3bd052 480 ProSitePatterns PS00717 Sigma-54 factors family signature 1. 368 387 - T 01-11-2018 IPR000394 RNA polymerase sigma factor 54 GO:0001216|GO:0016987 CDA09_20845 df2c38dba495fa2d6884129b0d3bd052 480 Pfam PF04552 Sigma-54, DNA binding domain 323 478 1.1E-66 T 01-11-2018 IPR007634 RNA polymerase sigma factor 54, DNA-binding CDA09_20845 df2c38dba495fa2d6884129b0d3bd052 480 TIGRFAM TIGR02395 rpoN_sigma: RNA polymerase sigma-54 factor 10 478 3.3E-140 T 01-11-2018 IPR000394 RNA polymerase sigma factor 54 GO:0001216|GO:0016987 CDA09_20845 df2c38dba495fa2d6884129b0d3bd052 480 ProSitePatterns PS00718 Sigma-54 factors family signature 2. 459 466 - T 01-11-2018 IPR000394 RNA polymerase sigma factor 54 GO:0001216|GO:0016987 CDA09_20845 df2c38dba495fa2d6884129b0d3bd052 480 Pfam PF00309 Sigma-54 factor, Activator interacting domain (AID) 4 48 1.8E-16 T 01-11-2018 IPR000394 RNA polymerase sigma factor 54 GO:0001216|GO:0016987 CDA09_20845 df2c38dba495fa2d6884129b0d3bd052 480 Gene3D G3DSA:1.10.10.60 421 479 1.9E-23 T 01-11-2018 CDA09_20845 df2c38dba495fa2d6884129b0d3bd052 480 Pfam PF04963 Sigma-54 factor, core binding domain 116 309 1.6E-57 T 01-11-2018 IPR007046 RNA polymerase sigma factor 54, core-binding domain GO:0003677|GO:0006352 CDA09_20845 df2c38dba495fa2d6884129b0d3bd052 480 PIRSF PIRSF000774 1 480 2.4E-151 T 01-11-2018 IPR000394 RNA polymerase sigma factor 54 GO:0001216|GO:0016987 CDA09_20845 df2c38dba495fa2d6884129b0d3bd052 480 PRINTS PR00045 Sigma-54 factor signature 396 407 4.6E-31 T 01-11-2018 IPR000394 RNA polymerase sigma factor 54 GO:0001216|GO:0016987 CDA09_20845 df2c38dba495fa2d6884129b0d3bd052 480 PRINTS PR00045 Sigma-54 factor signature 454 472 4.6E-31 T 01-11-2018 IPR000394 RNA polymerase sigma factor 54 GO:0001216|GO:0016987 CDA09_20845 df2c38dba495fa2d6884129b0d3bd052 480 PRINTS PR00045 Sigma-54 factor signature 193 210 4.6E-31 T 01-11-2018 IPR000394 RNA polymerase sigma factor 54 GO:0001216|GO:0016987 CDA09_20845 df2c38dba495fa2d6884129b0d3bd052 480 PRINTS PR00045 Sigma-54 factor signature 380 392 4.6E-31 T 01-11-2018 IPR000394 RNA polymerase sigma factor 54 GO:0001216|GO:0016987 CDA09_01855 f605366ac2eba78f7188f30b490c3b6c 374 Gene3D G3DSA:3.40.50.2300 14 333 2.5E-65 T 01-11-2018 CDA09_01855 f605366ac2eba78f7188f30b490c3b6c 374 Gene3D G3DSA:3.40.50.2300 123 257 2.5E-65 T 01-11-2018 CDA09_01855 f605366ac2eba78f7188f30b490c3b6c 374 Pfam PF13458 Periplasmic binding protein 14 345 6.0E-47 T 01-11-2018 IPR028081 Leucine-binding protein domain CDA09_01855 f605366ac2eba78f7188f30b490c3b6c 374 SUPERFAMILY SSF53822 13 359 2.15E-64 T 01-11-2018 IPR028082 Periplasmic binding protein-like I CDA09_00260 562f4c12030f42e5664b69cc6376e620 341 Gene3D G3DSA:3.10.350.10 33 81 2.8E-14 T 01-11-2018 IPR036779 LysM domain superfamily CDA09_00260 562f4c12030f42e5664b69cc6376e620 341 SMART SM00257 34 83 2.8E-5 T 01-11-2018 IPR018392 LysM domain CDA09_00260 562f4c12030f42e5664b69cc6376e620 341 Pfam PF01476 LysM domain 35 82 1.6E-12 T 01-11-2018 IPR018392 LysM domain CDA09_00260 562f4c12030f42e5664b69cc6376e620 341 SUPERFAMILY SSF54106 34 82 1.7E-6 T 01-11-2018 CDA09_21275 e179e7d33fc2e15358927b043ed2a43e 351 PIRSF PIRSF006268 4 342 4.0E-87 T 01-11-2018 IPR024932 Flavin transferase ApbE GO:0017013 CDA09_21275 e179e7d33fc2e15358927b043ed2a43e 351 SUPERFAMILY SSF143631 31 338 1.46E-74 T 01-11-2018 IPR003374 ApbE-like superfamily CDA09_21275 e179e7d33fc2e15358927b043ed2a43e 351 Gene3D G3DSA:3.10.520.20 25 344 2.1E-84 T 01-11-2018 CDA09_21275 e179e7d33fc2e15358927b043ed2a43e 351 Pfam PF02424 ApbE family 39 313 1.1E-71 T 01-11-2018 IPR024932 Flavin transferase ApbE GO:0017013 CDA09_07060 748df1563dbccd68234adbe41510e3f8 238 Gene3D G3DSA:3.40.1160.10 1 238 1.2E-79 T 01-11-2018 IPR036393 Acetylglutamate kinase-like superfamily CDA09_07060 748df1563dbccd68234adbe41510e3f8 238 TIGRFAM TIGR02075 pyrH_bact: UMP kinase 6 237 1.1E-100 T 01-11-2018 IPR015963 Uridylate kinase, bacteria GO:0005737|GO:0006221|GO:0033862 KEGG: 00240+2.7.4.22 CDA09_07060 748df1563dbccd68234adbe41510e3f8 238 Pfam PF00696 Amino acid kinase family 7 215 3.3E-28 T 01-11-2018 IPR001048 Aspartate/glutamate/uridylate kinase Reactome: R-HSA-70614 CDA09_07060 748df1563dbccd68234adbe41510e3f8 238 SUPERFAMILY SSF53633 5 237 1.83E-72 T 01-11-2018 IPR036393 Acetylglutamate kinase-like superfamily CDA09_07060 748df1563dbccd68234adbe41510e3f8 238 Hamap MF_01220_B Uridylate kinase [pyrH]. 4 237 44.616 T 01-11-2018 IPR015963 Uridylate kinase, bacteria GO:0005737|GO:0006221|GO:0033862 KEGG: 00240+2.7.4.22 CDA09_07060 748df1563dbccd68234adbe41510e3f8 238 PIRSF PIRSF005650 1 238 1.4E-92 T 01-11-2018 IPR011817 Uridylate kinase GO:0006221|GO:0009041 KEGG: 00240+2.7.4.22 CDA09_04280 585f3f0729f9fab7c7ea7020565c8b6d 135 Pfam PF14760 Rnk N-terminus 3 42 3.5E-12 T 01-11-2018 IPR029462 Regulator of nucleoside diphosphate kinase, N-terminal domain CDA09_04280 585f3f0729f9fab7c7ea7020565c8b6d 135 SUPERFAMILY SSF54534 48 125 3.27E-15 T 01-11-2018 CDA09_04280 585f3f0729f9fab7c7ea7020565c8b6d 135 Pfam PF01272 Transcription elongation factor, GreA/GreB, C-term 49 124 2.5E-15 T 01-11-2018 IPR001437 Transcription elongation factor, GreA/GreB, C-terminal GO:0003677|GO:0032784 CDA09_04280 585f3f0729f9fab7c7ea7020565c8b6d 135 Gene3D G3DSA:3.10.50.30 44 134 4.3E-27 T 01-11-2018 IPR036953 Transcription elongation factor GreA/GreB, C-terminal domain superfamily GO:0003677|GO:0032784 CDA09_04280 585f3f0729f9fab7c7ea7020565c8b6d 135 Gene3D G3DSA:1.10.286.20 1 43 2.9E-8 T 01-11-2018 CDA09_04280 585f3f0729f9fab7c7ea7020565c8b6d 135 PIRSF PIRSF006092 10 127 3.7E-22 T 01-11-2018 IPR023459 Transcription elongation factor GreA/GreB family GO:0070063 CDA09_04070 37fbf7967e0f8f9cb7e4175b4af4f92d 179 TIGRFAM TIGR00095 TIGR00095: 16S rRNA (guanine(966)-N(2))-methyltransferase RsmD 3 174 7.1E-40 T 01-11-2018 IPR004398 RNA methyltransferase, RsmD GO:0008168|GO:0031167 CDA09_04070 37fbf7967e0f8f9cb7e4175b4af4f92d 179 Pfam PF03602 Conserved hypothetical protein 95 4 173 1.7E-48 T 01-11-2018 CDA09_04070 37fbf7967e0f8f9cb7e4175b4af4f92d 179 PIRSF PIRSF004553 3 177 1.0E-43 T 01-11-2018 IPR004398 RNA methyltransferase, RsmD GO:0008168|GO:0031167 CDA09_04070 37fbf7967e0f8f9cb7e4175b4af4f92d 179 Gene3D G3DSA:3.40.50.150 1 179 5.2E-54 T 01-11-2018 CDA09_04070 37fbf7967e0f8f9cb7e4175b4af4f92d 179 SUPERFAMILY SSF53335 4 173 2.41E-46 T 01-11-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase CDA09_04070 37fbf7967e0f8f9cb7e4175b4af4f92d 179 ProSitePatterns PS00092 N-6 Adenine-specific DNA methylases signature. 116 122 - T 01-11-2018 IPR002052 DNA methylase, N-6 adenine-specific, conserved site GO:0003676|GO:0008168|GO:0032259 CDA09_18740 985f5dd205e93ee40229c6d6a36b39fc 166 Pfam PF00156 Phosphoribosyl transferase domain 25 132 8.9E-17 T 01-11-2018 IPR000836 Phosphoribosyltransferase domain GO:0009116 CDA09_18740 985f5dd205e93ee40229c6d6a36b39fc 166 SUPERFAMILY SSF53271 12 140 1.11E-34 T 01-11-2018 IPR029057 Phosphoribosyltransferase-like CDA09_18740 985f5dd205e93ee40229c6d6a36b39fc 166 Gene3D G3DSA:3.40.50.2020 3 158 5.6E-40 T 01-11-2018 CDA09_21980 c1dee99964b83d1d42cb0b2df0d6e6ed 248 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 128 144 9.7E-45 T 01-11-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CDA09_21980 c1dee99964b83d1d42cb0b2df0d6e6ed 248 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 174 191 9.7E-45 T 01-11-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CDA09_21980 c1dee99964b83d1d42cb0b2df0d6e6ed 248 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 153 172 9.7E-45 T 01-11-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CDA09_21980 c1dee99964b83d1d42cb0b2df0d6e6ed 248 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 207 227 9.7E-45 T 01-11-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CDA09_21980 c1dee99964b83d1d42cb0b2df0d6e6ed 248 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 81 92 9.7E-45 T 01-11-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CDA09_21980 c1dee99964b83d1d42cb0b2df0d6e6ed 248 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 7 24 9.7E-45 T 01-11-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CDA09_21980 c1dee99964b83d1d42cb0b2df0d6e6ed 248 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 134 142 3.1E-14 T 01-11-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CDA09_21980 c1dee99964b83d1d42cb0b2df0d6e6ed 248 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 153 172 3.1E-14 T 01-11-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CDA09_21980 c1dee99964b83d1d42cb0b2df0d6e6ed 248 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 81 92 3.1E-14 T 01-11-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CDA09_21980 c1dee99964b83d1d42cb0b2df0d6e6ed 248 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 140 168 - T 01-11-2018 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 CDA09_21980 c1dee99964b83d1d42cb0b2df0d6e6ed 248 SUPERFAMILY SSF51735 5 245 7.68E-88 T 01-11-2018 IPR036291 NAD(P)-binding domain superfamily CDA09_21980 c1dee99964b83d1d42cb0b2df0d6e6ed 248 Gene3D G3DSA:3.40.50.720 2 246 2.1E-86 T 01-11-2018 CDA09_21980 c1dee99964b83d1d42cb0b2df0d6e6ed 248 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 12 242 7.0E-68 T 01-11-2018 CDA09_21980 c1dee99964b83d1d42cb0b2df0d6e6ed 248 SMART SM00822 This enzymatic domain is part of bacterial polyketide synthases and catalyses the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain. It uses NADPH to reduce the keto group to a hydroxy group. 6 184 0.0048 T 01-11-2018 CDA09_02670 7a32833b422cbccac357c59a0e66a380 198 PIRSF PIRSF011489 1 195 2.6E-68 T 01-11-2018 IPR007431 Acyl carrier protein phosphodiesterase GO:0006633|GO:0008770 KEGG: 00770+3.1.4.14|MetaCyc: PWY-6012 CDA09_02670 7a32833b422cbccac357c59a0e66a380 198 Pfam PF04336 Acyl carrier protein phosphodiesterase 81 182 6.2E-31 T 01-11-2018 IPR007431 Acyl carrier protein phosphodiesterase GO:0006633|GO:0008770 KEGG: 00770+3.1.4.14|MetaCyc: PWY-6012 CDA09_02800 dc041e16c9e304a532472053eaad467b 164 Gene3D G3DSA:3.40.470.10 4 164 3.1E-50 T 01-11-2018 IPR036895 Uracil-DNA glycosylase-like domain superfamily Reactome: R-HSA-110328|Reactome: R-HSA-110329|Reactome: R-HSA-110357 CDA09_02800 dc041e16c9e304a532472053eaad467b 164 SUPERFAMILY SSF52141 7 163 1.96E-35 T 01-11-2018 IPR036895 Uracil-DNA glycosylase-like domain superfamily Reactome: R-HSA-110328|Reactome: R-HSA-110329|Reactome: R-HSA-110357 CDA09_02800 dc041e16c9e304a532472053eaad467b 164 TIGRFAM TIGR04274 hypoxanDNAglyco: DNA-deoxyinosine glycosylase 6 159 5.6E-46 T 01-11-2018 IPR026353 Hypoxanthine-DNA glycosylase CDA09_02800 dc041e16c9e304a532472053eaad467b 164 Pfam PF03167 Uracil DNA glycosylase superfamily 13 161 4.2E-6 T 01-11-2018 IPR005122 Uracil-DNA glycosylase-like Reactome: R-HSA-110328|Reactome: R-HSA-110329|Reactome: R-HSA-110357 CDA09_02800 dc041e16c9e304a532472053eaad467b 164 SMART SM00987 8 163 5.8E-6 T 01-11-2018 CDA09_02800 dc041e16c9e304a532472053eaad467b 164 SMART SM00986 8 163 5.8E-6 T 01-11-2018 IPR005122 Uracil-DNA glycosylase-like Reactome: R-HSA-110328|Reactome: R-HSA-110329|Reactome: R-HSA-110357 CDA09_08740 92d026e47bba88b2ce3757dcb0983699 304 TIGRFAM TIGR02108 PQQ_syn_pqqB: coenzyme PQQ biosynthesis protein B 2 304 1.2E-125 T 01-11-2018 IPR011842 Coenzyme PQQ biosynthesis protein B CDA09_08740 92d026e47bba88b2ce3757dcb0983699 304 SUPERFAMILY SSF56281 2 304 9.54E-63 T 01-11-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like CDA09_08740 92d026e47bba88b2ce3757dcb0983699 304 Hamap MF_00653 Coenzyme PQQ synthesis protein B [pqqB]. 1 304 172.321 T 01-11-2018 IPR011842 Coenzyme PQQ biosynthesis protein B CDA09_08740 92d026e47bba88b2ce3757dcb0983699 304 Gene3D G3DSA:3.60.15.10 1 304 1.6E-93 T 01-11-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like CDA09_08740 92d026e47bba88b2ce3757dcb0983699 304 Pfam PF12706 Beta-lactamase superfamily domain 50 271 9.6E-48 T 01-11-2018 IPR001279 Metallo-beta-lactamase CDA09_15630 46e99785bdcb89fe2babcc6a0ff6d72b 254 Gene3D G3DSA:1.10.12.10 198 252 1.3E-11 T 01-11-2018 IPR014748 Enoyl-CoA hydratase, C-terminal CDA09_15630 46e99785bdcb89fe2babcc6a0ff6d72b 254 Gene3D G3DSA:3.90.226.10 1 197 1.0E-64 T 01-11-2018 CDA09_15630 46e99785bdcb89fe2babcc6a0ff6d72b 254 Pfam PF00378 Enoyl-CoA hydratase/isomerase 10 252 1.4E-59 T 01-11-2018 IPR001753 Enoyl-CoA hydratase/isomerase GO:0003824 CDA09_15630 46e99785bdcb89fe2babcc6a0ff6d72b 254 SUPERFAMILY SSF52096 2 252 4.58E-75 T 01-11-2018 IPR029045 ClpP/crotonase-like domain superfamily CDA09_16120 8245271dfdf838864c021ad9c0b2ad41 270 Pfam PF09955 Predicted integral membrane protein (DUF2189) 72 193 1.0E-38 T 01-11-2018 IPR018692 Predicted integral membrane protein DUF2189 CDA09_06590 a0513379110049436a3a000861b104ea 229 Gene3D G3DSA:1.10.3720.10 6 229 1.5E-48 T 01-11-2018 IPR035906 MetI-like superfamily CDA09_06590 a0513379110049436a3a000861b104ea 229 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 37 227 5.1E-18 T 01-11-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 CDA09_06590 a0513379110049436a3a000861b104ea 229 SUPERFAMILY SSF161098 19 212 1.83E-38 T 01-11-2018 IPR035906 MetI-like superfamily CDA09_06590 a0513379110049436a3a000861b104ea 229 TIGRFAM TIGR01726 HEQRo_perm_3TM: amino ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family 16 121 2.7E-22 T 01-11-2018 IPR010065 Amino acid ABC transporter, permease protein, 3-TM domain GO:0016021|GO:0022857|GO:0043190|GO:0071705 CDA09_01350 daa627d378073dbbc09fee2a4bad12d9 217 SMART SM00671 31 64 350.0 T 01-11-2018 IPR006597 Sel1-like repeat CDA09_01350 daa627d378073dbbc09fee2a4bad12d9 217 SMART SM00671 65 96 6.5 T 01-11-2018 IPR006597 Sel1-like repeat CDA09_01350 daa627d378073dbbc09fee2a4bad12d9 217 SMART SM00671 97 132 0.0044 T 01-11-2018 IPR006597 Sel1-like repeat CDA09_01350 daa627d378073dbbc09fee2a4bad12d9 217 SUPERFAMILY SSF81901 34 203 7.5E-22 T 01-11-2018 CDA09_01350 daa627d378073dbbc09fee2a4bad12d9 217 Gene3D G3DSA:1.25.40.10 24 212 1.5E-24 T 01-11-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 CDA09_01350 daa627d378073dbbc09fee2a4bad12d9 217 Pfam PF08238 Sel1 repeat 100 132 0.0021 T 01-11-2018 IPR006597 Sel1-like repeat CDA09_01350 daa627d378073dbbc09fee2a4bad12d9 217 Pfam PF08238 Sel1 repeat 82 96 0.048 T 01-11-2018 IPR006597 Sel1-like repeat CDA09_01350 daa627d378073dbbc09fee2a4bad12d9 217 Pfam PF08238 Sel1 repeat 180 200 120.0 T 01-11-2018 IPR006597 Sel1-like repeat CDA09_01350 daa627d378073dbbc09fee2a4bad12d9 217 Pfam PF08238 Sel1 repeat 154 171 69.0 T 01-11-2018 IPR006597 Sel1-like repeat CDA09_08775 f411db7624e1d91ae21b17edf9c1b3cf 209 SUPERFAMILY SSF53474 8 207 5.04E-35 T 01-11-2018 IPR029058 Alpha/Beta hydrolase fold CDA09_08775 f411db7624e1d91ae21b17edf9c1b3cf 209 Pfam PF02230 Phospholipase/Carboxylesterase 9 205 1.0E-29 T 01-11-2018 IPR003140 Phospholipase/carboxylesterase/thioesterase GO:0016787 CDA09_08775 f411db7624e1d91ae21b17edf9c1b3cf 209 Gene3D G3DSA:3.40.50.1820 2 208 2.8E-35 T 01-11-2018 IPR029058 Alpha/Beta hydrolase fold CDA09_14625 ac28b24f07f83525f5ec4582f0b32619 199 Hamap MF_01984 Flavin prenyltransferase UbiX [ubiX]. 1 184 36.158 T 01-11-2018 IPR004507 Flavin prenyltransferase UbiX-like CDA09_14625 ac28b24f07f83525f5ec4582f0b32619 199 TIGRFAM TIGR00421 ubiX_pad: polyprenyl P-hydroxybenzoate and phenylacrylic acid decarboxylases 2 182 8.4E-75 T 01-11-2018 IPR004507 Flavin prenyltransferase UbiX-like CDA09_14625 ac28b24f07f83525f5ec4582f0b32619 199 Pfam PF02441 Flavoprotein 1 163 5.8E-26 T 01-11-2018 IPR003382 Flavoprotein GO:0003824 Reactome: R-HSA-196783 CDA09_14625 ac28b24f07f83525f5ec4582f0b32619 199 Gene3D G3DSA:3.40.50.1950 1 196 8.2E-78 T 01-11-2018 IPR036551 Flavin prenyltransferase-like GO:0003824 Reactome: R-HSA-196783 CDA09_14625 ac28b24f07f83525f5ec4582f0b32619 199 SUPERFAMILY SSF52507 1 184 3.27E-59 T 01-11-2018 IPR036551 Flavin prenyltransferase-like GO:0003824 Reactome: R-HSA-196783 CDA09_06865 47cad30e73f46e477f2ee35db98bb759 384 Pfam PF02120 Flagellar hook-length control protein FliK 311 379 3.6E-10 T 01-11-2018 IPR021136 Flagellar hook-length control protein-like, C-terminal CDA09_07065 85f15efbb9debbcb2e21f525be1c2d0c 185 Gene3D G3DSA:3.30.1360.40 31 105 1.8E-64 T 01-11-2018 CDA09_07065 85f15efbb9debbcb2e21f525be1c2d0c 185 TIGRFAM TIGR00496 frr: ribosome recycling factor 10 185 1.0E-68 T 01-11-2018 IPR002661 Ribosome recycling factor GO:0006412 Reactome: R-HSA-5419276 CDA09_07065 85f15efbb9debbcb2e21f525be1c2d0c 185 Pfam PF01765 Ribosome recycling factor 20 183 4.1E-61 T 01-11-2018 IPR023584 Ribosome recycling factor domain Reactome: R-HSA-5419276 CDA09_07065 85f15efbb9debbcb2e21f525be1c2d0c 185 Hamap MF_00040 Ribosome-recycling factor [frr]. 3 185 26.659 T 01-11-2018 IPR002661 Ribosome recycling factor GO:0006412 Reactome: R-HSA-5419276 CDA09_07065 85f15efbb9debbcb2e21f525be1c2d0c 185 Gene3D G3DSA:1.10.132.20 12 182 1.8E-64 T 01-11-2018 CDA09_07065 85f15efbb9debbcb2e21f525be1c2d0c 185 SUPERFAMILY SSF55194 1 185 9.03E-69 T 01-11-2018 IPR036191 RRF superfamily Reactome: R-HSA-5419276 CDA09_06940 5e64ad2826c7c302afdce0c6474f64b5 202 SUPERFAMILY SSF53323 5 195 9.68E-48 T 01-11-2018 IPR002869 Pyruvate-flavodoxin oxidoreductase, central domain GO:0016491|GO:0055114 CDA09_06940 5e64ad2826c7c302afdce0c6474f64b5 202 Gene3D G3DSA:3.40.920.10 1 201 1.0E-43 T 01-11-2018 IPR002869 Pyruvate-flavodoxin oxidoreductase, central domain GO:0016491|GO:0055114 CDA09_06940 5e64ad2826c7c302afdce0c6474f64b5 202 Pfam PF01558 Pyruvate ferredoxin/flavodoxin oxidoreductase 13 192 1.1E-41 T 01-11-2018 IPR019752 Pyruvate/ketoisovalerate oxidoreductase, catalytic domain GO:0016903|GO:0055114 CDA09_06875 b5b7a4b40a8c4c2cb6831cb2b78509fa 138 PIRSF PIRSF039090 6 137 1.3E-40 T 01-11-2018 IPR003713 Flagellar protein FliS GO:0044780 CDA09_06875 b5b7a4b40a8c4c2cb6831cb2b78509fa 138 Gene3D G3DSA:1.20.120.340 4 130 1.1E-40 T 01-11-2018 CDA09_06875 b5b7a4b40a8c4c2cb6831cb2b78509fa 138 SUPERFAMILY SSF101116 11 128 2.62E-38 T 01-11-2018 IPR036584 Flagellar protein FliS superfamily GO:0044780 CDA09_06875 b5b7a4b40a8c4c2cb6831cb2b78509fa 138 TIGRFAM TIGR00208 fliS: flagellar protein FliS 7 125 5.1E-32 T 01-11-2018 IPR003713 Flagellar protein FliS GO:0044780 CDA09_06875 b5b7a4b40a8c4c2cb6831cb2b78509fa 138 Pfam PF02561 Flagellar protein FliS 10 127 2.2E-38 T 01-11-2018 IPR003713 Flagellar protein FliS GO:0044780 CDA09_20445 66c486c2dc148e8d4baa219b0018a3da 147 Hamap MF_01185 Flagellar assembly factor FliW [fliW]. 17 146 19.905 T 01-11-2018 IPR003775 Flagellar assembly factor FliW GO:0044780 CDA09_20445 66c486c2dc148e8d4baa219b0018a3da 147 Gene3D G3DSA:2.30.290.10 1 144 1.0E-38 T 01-11-2018 IPR024046 Flagellar assembly factor FliW domain superfamily CDA09_20445 66c486c2dc148e8d4baa219b0018a3da 147 Pfam PF02623 FliW protein 19 135 1.7E-28 T 01-11-2018 IPR003775 Flagellar assembly factor FliW GO:0044780 CDA09_20445 66c486c2dc148e8d4baa219b0018a3da 147 SUPERFAMILY SSF141457 1 140 2.09E-33 T 01-11-2018 IPR024046 Flagellar assembly factor FliW domain superfamily CDA09_08800 56ec267e648aebec00cec8989dd48e96 324 SUPERFAMILY SSF53850 89 296 7.42E-44 T 01-11-2018 CDA09_08800 56ec267e648aebec00cec8989dd48e96 324 Gene3D G3DSA:3.40.190.10 91 290 1.1E-62 T 01-11-2018 CDA09_08800 56ec267e648aebec00cec8989dd48e96 324 Gene3D G3DSA:3.40.190.10 163 264 1.1E-62 T 01-11-2018 CDA09_08800 56ec267e648aebec00cec8989dd48e96 324 Gene3D G3DSA:1.10.10.10 3 89 5.6E-24 T 01-11-2018 IPR036388 Winged helix-like DNA-binding domain superfamily CDA09_08800 56ec267e648aebec00cec8989dd48e96 324 Pfam PF03466 LysR substrate binding domain 89 293 6.0E-41 T 01-11-2018 IPR005119 LysR, substrate-binding CDA09_08800 56ec267e648aebec00cec8989dd48e96 324 SUPERFAMILY SSF46785 3 111 1.95E-22 T 01-11-2018 IPR036390 Winged helix DNA-binding domain superfamily CDA09_08800 56ec267e648aebec00cec8989dd48e96 324 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 40 51 6.5E-5 T 01-11-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 CDA09_08800 56ec267e648aebec00cec8989dd48e96 324 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 30 40 6.5E-5 T 01-11-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 CDA09_08800 56ec267e648aebec00cec8989dd48e96 324 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 19 30 6.5E-5 T 01-11-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 CDA09_08800 56ec267e648aebec00cec8989dd48e96 324 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 5 63 1.4E-19 T 01-11-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 CDA09_02255 daf2ac9e68efd24bf044f0f79e090a31 145 SMART SM00422 7 74 6.6E-20 T 01-11-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 CDA09_02255 daf2ac9e68efd24bf044f0f79e090a31 145 Gene3D G3DSA:1.10.1660.10 1 141 1.1E-26 T 01-11-2018 CDA09_02255 daf2ac9e68efd24bf044f0f79e090a31 145 Pfam PF13411 MerR HTH family regulatory protein 7 72 1.2E-16 T 01-11-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 CDA09_02255 daf2ac9e68efd24bf044f0f79e090a31 145 SUPERFAMILY SSF46955 7 126 6.59E-26 T 01-11-2018 IPR009061 Putative DNA-binding domain superfamily CDA09_08590 7c861081632850bf1c88644a84926270 303 Gene3D G3DSA:3.40.190.10 93 293 2.1E-57 T 01-11-2018 CDA09_08590 7c861081632850bf1c88644a84926270 303 Gene3D G3DSA:3.40.190.10 165 267 2.1E-57 T 01-11-2018 CDA09_08590 7c861081632850bf1c88644a84926270 303 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 7 65 3.1E-19 T 01-11-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 CDA09_08590 7c861081632850bf1c88644a84926270 303 SUPERFAMILY SSF46785 6 114 6.23E-22 T 01-11-2018 IPR036390 Winged helix DNA-binding domain superfamily CDA09_08590 7c861081632850bf1c88644a84926270 303 SUPERFAMILY SSF53850 92 299 2.17E-38 T 01-11-2018 CDA09_08590 7c861081632850bf1c88644a84926270 303 Pfam PF03466 LysR substrate binding domain 92 295 1.7E-37 T 01-11-2018 IPR005119 LysR, substrate-binding CDA09_08590 7c861081632850bf1c88644a84926270 303 Gene3D G3DSA:1.10.10.10 5 89 1.8E-25 T 01-11-2018 IPR036388 Winged helix-like DNA-binding domain superfamily CDA09_14465 b31508efcc23eff696112edf8982fb41 346 Hamap MF_00625 Selenide, water dikinase [selD]. 3 346 42.602 T 01-11-2018 IPR023061 Selenophosphate synthetase, class I GO:0004756|GO:0005524|GO:0016260 KEGG: 00450+2.7.9.3|MetaCyc: PWY-6281 CDA09_14465 b31508efcc23eff696112edf8982fb41 346 Pfam PF02769 AIR synthase related protein, C-terminal domain 167 340 1.1E-28 T 01-11-2018 IPR010918 PurM-like, C-terminal domain CDA09_14465 b31508efcc23eff696112edf8982fb41 346 Pfam PF00586 AIR synthase related protein, N-terminal domain 48 155 1.0E-18 T 01-11-2018 IPR016188 PurM-like, N-terminal domain CDA09_14465 b31508efcc23eff696112edf8982fb41 346 Gene3D G3DSA:3.30.1330.10 1 160 2.0E-46 T 01-11-2018 IPR036921 PurM-like, N-terminal domain superfamily CDA09_14465 b31508efcc23eff696112edf8982fb41 346 SUPERFAMILY SSF56042 163 341 2.24E-46 T 01-11-2018 IPR036676 PurM-like, C-terminal domain superfamily CDA09_14465 b31508efcc23eff696112edf8982fb41 346 Gene3D G3DSA:3.90.650.10 162 343 6.7E-50 T 01-11-2018 IPR036676 PurM-like, C-terminal domain superfamily CDA09_14465 b31508efcc23eff696112edf8982fb41 346 TIGRFAM TIGR00476 selD: selenide, water dikinase 5 313 1.7E-128 T 01-11-2018 IPR004536 Selenophosphate synthetase GO:0005524 KEGG: 00450+2.7.9.3|MetaCyc: PWY-6281 CDA09_14465 b31508efcc23eff696112edf8982fb41 346 SUPERFAMILY SSF55326 6 158 1.5E-39 T 01-11-2018 IPR036921 PurM-like, N-terminal domain superfamily CDA09_14465 b31508efcc23eff696112edf8982fb41 346 PIRSF PIRSF036407 1 345 3.4E-117 T 01-11-2018 IPR004536 Selenophosphate synthetase GO:0005524 KEGG: 00450+2.7.9.3|MetaCyc: PWY-6281 CDA09_14285 a4549fe3440aec4652f4e62a28147390 127 Pfam PF02033 Ribosome-binding factor A 7 110 2.5E-30 T 01-11-2018 IPR000238 Ribosome-binding factor A GO:0006364 CDA09_14285 a4549fe3440aec4652f4e62a28147390 127 Gene3D G3DSA:3.30.300.20 1 104 9.2E-34 T 01-11-2018 IPR015946 K homology domain-like, alpha/beta CDA09_14285 a4549fe3440aec4652f4e62a28147390 127 TIGRFAM TIGR00082 rbfA: ribosome-binding factor A 4 115 6.5E-32 T 01-11-2018 IPR000238 Ribosome-binding factor A GO:0006364 CDA09_14285 a4549fe3440aec4652f4e62a28147390 127 ProDom PD007327 FACTOR A RIBOSOME-BINDING PROCESSING RRNA 3D-STRUCTURE RIBOSOMAL-BINDING PRECURSOR A RBFA 9 97 3.0E-43 T 01-11-2018 IPR000238 Ribosome-binding factor A GO:0006364 CDA09_14285 a4549fe3440aec4652f4e62a28147390 127 SUPERFAMILY SSF89919 3 112 4.58E-34 T 01-11-2018 IPR023799 Ribosome-binding factor A domain superfamily CDA09_14285 a4549fe3440aec4652f4e62a28147390 127 Hamap MF_00003 Ribosome-binding factor A [rbfA]. 6 110 26.14 T 01-11-2018 IPR000238 Ribosome-binding factor A GO:0006364 CDA09_20035 7e4464b46833500075029fb5c263ed0a 441 SUPERFAMILY SSF48452 45 177 6.7E-23 T 01-11-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 CDA09_20035 7e4464b46833500075029fb5c263ed0a 441 SMART SM00028 46 79 0.017 T 01-11-2018 IPR019734 Tetratricopeptide repeat GO:0005515 CDA09_20035 7e4464b46833500075029fb5c263ed0a 441 SMART SM00028 80 113 0.3 T 01-11-2018 IPR019734 Tetratricopeptide repeat GO:0005515 CDA09_20035 7e4464b46833500075029fb5c263ed0a 441 SMART SM00028 114 147 10.0 T 01-11-2018 IPR019734 Tetratricopeptide repeat GO:0005515 CDA09_20035 7e4464b46833500075029fb5c263ed0a 441 Gene3D G3DSA:1.25.40.10 36 91 1.4E-7 T 01-11-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 CDA09_20035 7e4464b46833500075029fb5c263ed0a 441 Pfam PF13399 LytR cell envelope-related transcriptional attenuator 315 401 7.8E-7 T 01-11-2018 IPR027381 Putative LytR/CpsA/Psr regulator, C-terminal domain CDA09_20035 7e4464b46833500075029fb5c263ed0a 441 Pfam PF13181 Tetratricopeptide repeat 116 147 0.13 T 01-11-2018 IPR019734 Tetratricopeptide repeat GO:0005515 CDA09_20035 7e4464b46833500075029fb5c263ed0a 441 Pfam PF13181 Tetratricopeptide repeat 47 78 0.0011 T 01-11-2018 IPR019734 Tetratricopeptide repeat GO:0005515 CDA09_20035 7e4464b46833500075029fb5c263ed0a 441 Pfam PF13181 Tetratricopeptide repeat 80 112 0.018 T 01-11-2018 IPR019734 Tetratricopeptide repeat GO:0005515 CDA09_20035 7e4464b46833500075029fb5c263ed0a 441 Gene3D G3DSA:1.25.40.10 92 177 9.8E-15 T 01-11-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 CDA09_21950 22c238de1fc53324cc9f03be71a05253 209 Pfam PF01161 Phosphatidylethanolamine-binding protein 28 200 8.0E-36 T 01-11-2018 IPR008914 Phosphatidylethanolamine-binding protein CDA09_21950 22c238de1fc53324cc9f03be71a05253 209 Gene3D G3DSA:3.90.280.10 1 201 1.9E-43 T 01-11-2018 IPR036610 PEBP-like superfamily CDA09_21950 22c238de1fc53324cc9f03be71a05253 209 SUPERFAMILY SSF49777 5 202 2.35E-39 T 01-11-2018 IPR036610 PEBP-like superfamily CDA09_08770 9d652d041988ef26ea30e37906fd8e81 150 Pfam PF07681 DoxX 18 105 2.9E-20 T 01-11-2018 IPR032808 DoxX family CDA09_03175 36c8f048d0ebab69757ad62831622352 122 SUPERFAMILY SSF51230 2 120 7.85E-41 T 01-11-2018 IPR011053 Single hybrid motif CDA09_03175 36c8f048d0ebab69757ad62831622352 122 ProSitePatterns PS00189 2-oxo acid dehydrogenases acyltransferase component lipoyl binding site. 44 73 - T 01-11-2018 IPR003016 2-oxo acid dehydrogenase, lipoyl-binding site Reactome: R-HSA-389661 CDA09_03175 36c8f048d0ebab69757ad62831622352 122 Pfam PF01597 Glycine cleavage H-protein 5 120 3.8E-39 T 01-11-2018 IPR033753 Glycine cleavage system H-protein/Simiate CDA09_03175 36c8f048d0ebab69757ad62831622352 122 TIGRFAM TIGR00527 gcvH: glycine cleavage system H protein 3 121 5.6E-42 T 01-11-2018 IPR017453 Glycine cleavage system H-protein, subgroup GO:0005960|GO:0019464 Reactome: R-HSA-389661|Reactome: R-HSA-6783984 CDA09_03175 36c8f048d0ebab69757ad62831622352 122 Gene3D G3DSA:2.40.50.100 1 121 7.1E-45 T 01-11-2018 CDA09_03175 36c8f048d0ebab69757ad62831622352 122 Hamap MF_00272 Glycine cleavage system H protein [gcvH]. 1 122 37.281 T 01-11-2018 IPR002930 Glycine cleavage system H-protein GO:0005960|GO:0019464 Reactome: R-HSA-389661|Reactome: R-HSA-6783984 CDA09_02250 ca48b7480eea3dfe35024d7a72409f86 342 Gene3D G3DSA:1.10.10.10 283 337 6.5E-11 T 01-11-2018 IPR036388 Winged helix-like DNA-binding domain superfamily CDA09_02250 ca48b7480eea3dfe35024d7a72409f86 342 SMART SM00849 40 254 5.2E-24 T 01-11-2018 IPR001279 Metallo-beta-lactamase CDA09_02250 ca48b7480eea3dfe35024d7a72409f86 342 Pfam PF00753 Metallo-beta-lactamase superfamily 41 254 3.7E-26 T 01-11-2018 IPR001279 Metallo-beta-lactamase CDA09_02250 ca48b7480eea3dfe35024d7a72409f86 342 Gene3D G3DSA:3.60.15.10 20 281 2.9E-62 T 01-11-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like CDA09_02250 ca48b7480eea3dfe35024d7a72409f86 342 SUPERFAMILY SSF56281 3 331 3.01E-76 T 01-11-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like CDA09_04190 658a6d372f0f6de33ffb3e6f4506ceff 572 Gene3D G3DSA:1.10.287.130 366 425 1.7E-12 T 01-11-2018 CDA09_04190 658a6d372f0f6de33ffb3e6f4506ceff 572 Gene3D G3DSA:3.30.565.10 426 516 1.7E-12 T 01-11-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily CDA09_04190 658a6d372f0f6de33ffb3e6f4506ceff 572 SMART SM00388 362 428 1.6E-4 T 01-11-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 CDA09_04190 658a6d372f0f6de33ffb3e6f4506ceff 572 SUPERFAMILY SSF47384 356 424 1.2E-6 T 01-11-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 CDA09_08785 61c054f89822afebac5412709105ba7e 378 SUPERFAMILY SSF47203 227 376 4.99E-58 T 01-11-2018 IPR036250 Acyl-CoA dehydrogenase-like, C-terminal GO:0016627|GO:0055114 CDA09_08785 61c054f89822afebac5412709105ba7e 378 SUPERFAMILY SSF56645 1 239 4.84E-74 T 01-11-2018 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain superfamily GO:0016627|GO:0055114 CDA09_08785 61c054f89822afebac5412709105ba7e 378 Gene3D G3DSA:1.10.540.10 1 118 1.4E-36 T 01-11-2018 IPR037069 Acyl-CoA dehydrogenase/oxidase, N-terminal domain superfamily GO:0016627|GO:0050660|GO:0055114 CDA09_08785 61c054f89822afebac5412709105ba7e 378 Gene3D G3DSA:2.40.110.10 119 231 5.1E-41 T 01-11-2018 CDA09_08785 61c054f89822afebac5412709105ba7e 378 Pfam PF00441 Acyl-CoA dehydrogenase, C-terminal domain 227 375 1.2E-56 T 01-11-2018 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal GO:0016627|GO:0055114 CDA09_08785 61c054f89822afebac5412709105ba7e 378 ProSitePatterns PS00072 Acyl-CoA dehydrogenases signature 1. 122 134 - T 01-11-2018 IPR006089 Acyl-CoA dehydrogenase, conserved site GO:0003995|GO:0055114 CDA09_08785 61c054f89822afebac5412709105ba7e 378 Pfam PF02771 Acyl-CoA dehydrogenase, N-terminal domain 7 116 3.0E-28 T 01-11-2018 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal GO:0016627|GO:0050660|GO:0055114 CDA09_08785 61c054f89822afebac5412709105ba7e 378 Pfam PF02770 Acyl-CoA dehydrogenase, middle domain 120 215 1.7E-26 T 01-11-2018 IPR006091 Acyl-CoA oxidase/dehydrogenase, central domain GO:0016627|GO:0055114 CDA09_08785 61c054f89822afebac5412709105ba7e 378 ProSitePatterns PS00073 Acyl-CoA dehydrogenases signature 2. 334 353 - T 01-11-2018 IPR006089 Acyl-CoA dehydrogenase, conserved site GO:0003995|GO:0055114 CDA09_08785 61c054f89822afebac5412709105ba7e 378 Gene3D G3DSA:1.20.140.10 232 378 3.6E-57 T 01-11-2018 CDA09_08785 61c054f89822afebac5412709105ba7e 378 PIRSF PIRSF016578 4 378 3.6E-23 T 01-11-2018 CDA09_22500 13f3f8e7b96a62be30759f430003f98b 163 PRINTS PR00598 Bacterial regulatory protein MarR family signature 79 94 1.1E-12 T 01-11-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 CDA09_22500 13f3f8e7b96a62be30759f430003f98b 163 PRINTS PR00598 Bacterial regulatory protein MarR family signature 98 114 1.1E-12 T 01-11-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 CDA09_22500 13f3f8e7b96a62be30759f430003f98b 163 PRINTS PR00598 Bacterial regulatory protein MarR family signature 128 148 1.1E-12 T 01-11-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 CDA09_22500 13f3f8e7b96a62be30759f430003f98b 163 Pfam PF01047 MarR family 45 103 2.7E-11 T 01-11-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 CDA09_22500 13f3f8e7b96a62be30759f430003f98b 163 SMART SM00347 38 138 6.3E-17 T 01-11-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 CDA09_22500 13f3f8e7b96a62be30759f430003f98b 163 Gene3D G3DSA:1.10.10.10 4 154 6.3E-35 T 01-11-2018 IPR036388 Winged helix-like DNA-binding domain superfamily CDA09_22500 13f3f8e7b96a62be30759f430003f98b 163 SUPERFAMILY SSF46785 14 152 4.18E-33 T 01-11-2018 IPR036390 Winged helix DNA-binding domain superfamily CDA09_12930 411774b6ba52853f414fa1024eeadc1a 286 Pfam PF12729 Four helix bundle sensory module for signal transduction 1 84 2.5E-7 T 01-11-2018 IPR024478 Chemotaxis methyl-accepting receptor HlyB-like, 4HB MCP domain CDA09_12930 411774b6ba52853f414fa1024eeadc1a 286 SMART SM00304 227 279 9.1E-6 T 01-11-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 CDA09_12930 411774b6ba52853f414fa1024eeadc1a 286 SUPERFAMILY SSF158472 228 277 1.23E-5 T 01-11-2018 CDA09_12930 411774b6ba52853f414fa1024eeadc1a 286 Gene3D G3DSA:1.20.1480.50 187 284 4.7E-8 T 01-11-2018 CDA09_10025 0318053e390bfde6e61496dc096f8136 665 Pfam PF00724 NADH:flavin oxidoreductase / NADH oxidase family 9 346 2.1E-38 T 01-11-2018 IPR001155 NADH:flavin oxidoreductase/NADH oxidase, N-terminal GO:0010181|GO:0016491|GO:0055114 CDA09_10025 0318053e390bfde6e61496dc096f8136 665 Gene3D G3DSA:3.40.50.720 400 659 2.5E-71 T 01-11-2018 CDA09_10025 0318053e390bfde6e61496dc096f8136 665 Gene3D G3DSA:3.20.20.70 1 393 7.4E-84 T 01-11-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 CDA09_10025 0318053e390bfde6e61496dc096f8136 665 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 482 500 6.4E-5 T 01-11-2018 CDA09_10025 0318053e390bfde6e61496dc096f8136 665 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 400 419 6.4E-5 T 01-11-2018 CDA09_10025 0318053e390bfde6e61496dc096f8136 665 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 399 628 3.0E-14 T 01-11-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 CDA09_10025 0318053e390bfde6e61496dc096f8136 665 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 483 497 1.7E-5 T 01-11-2018 CDA09_10025 0318053e390bfde6e61496dc096f8136 665 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 399 424 1.7E-5 T 01-11-2018 CDA09_10025 0318053e390bfde6e61496dc096f8136 665 SUPERFAMILY SSF51395 3 363 2.93E-70 T 01-11-2018 CDA09_10025 0318053e390bfde6e61496dc096f8136 665 SUPERFAMILY SSF51905 374 654 6.21E-28 T 01-11-2018 IPR036188 FAD/NAD(P)-binding domain superfamily CDA09_10025 0318053e390bfde6e61496dc096f8136 665 Gene3D G3DSA:3.50.50.60 494 619 2.5E-71 T 01-11-2018 IPR036188 FAD/NAD(P)-binding domain superfamily CDA09_08545 fe396b3f2ab2808a872ddbf332126086 256 Pfam PF02633 Creatinine amidohydrolase 8 249 2.0E-53 T 01-11-2018 IPR003785 Creatininase/formamide hydrolase KEGG: 00740+3.5.1.102|MetaCyc: PWY-6167 CDA09_08545 fe396b3f2ab2808a872ddbf332126086 256 SUPERFAMILY SSF102215 3 252 8.24E-73 T 01-11-2018 IPR024087 Creatininase-like superfamily KEGG: 00740+3.5.1.102|MetaCyc: PWY-6167 CDA09_08545 fe396b3f2ab2808a872ddbf332126086 256 TIGRFAM TIGR04448 creatininase: creatininase 8 255 2.8E-107 T 01-11-2018 IPR031034 Creatinine amidohydrolase GO:0006601|GO:0006602|GO:0047789 KEGG: 00330+3.5.2.10 CDA09_08545 fe396b3f2ab2808a872ddbf332126086 256 Gene3D G3DSA:3.40.50.10310 1 256 1.1E-88 T 01-11-2018 IPR024087 Creatininase-like superfamily KEGG: 00740+3.5.1.102|MetaCyc: PWY-6167 CDA09_04335 f3f0ca1856960ad59391d522e6328863 74 TIGRFAM TIGR01411 tatAE: twin arginine-targeting protein translocase, TatA/E family 3 48 1.4E-23 T 01-11-2018 IPR006312 Sec-independent protein translocase protein TatA/E GO:0005886|GO:0008565|GO:0009306|GO:0015031|GO:0016021 CDA09_04335 f3f0ca1856960ad59391d522e6328863 74 Hamap MF_00236 Sec-independent protein translocase protein TatA [tatA]. 1 70 22.435 T 01-11-2018 IPR006312 Sec-independent protein translocase protein TatA/E GO:0005886|GO:0008565|GO:0009306|GO:0015031|GO:0016021 CDA09_04335 f3f0ca1856960ad59391d522e6328863 74 Pfam PF02416 mttA/Hcf106 family 5 52 3.5E-15 T 01-11-2018 IPR003369 Sec-independent protein translocase protein TatA/B/E GO:0008565|GO:0015031 CDA09_09125 bf5dc540bf25ebb9388816c9a21ad693 147 Pfam PF00582 Universal stress protein family 2 147 7.6E-28 T 01-11-2018 IPR006016 UspA CDA09_09125 bf5dc540bf25ebb9388816c9a21ad693 147 SUPERFAMILY SSF52402 2 147 3.1E-33 T 01-11-2018 CDA09_09125 bf5dc540bf25ebb9388816c9a21ad693 147 PRINTS PR01438 Universal stress protein signature 107 119 3.2E-17 T 01-11-2018 IPR006015 Universal stress protein A CDA09_09125 bf5dc540bf25ebb9388816c9a21ad693 147 PRINTS PR01438 Universal stress protein signature 2 20 3.2E-17 T 01-11-2018 IPR006015 Universal stress protein A CDA09_09125 bf5dc540bf25ebb9388816c9a21ad693 147 PRINTS PR01438 Universal stress protein signature 125 147 3.2E-17 T 01-11-2018 IPR006015 Universal stress protein A CDA09_09125 bf5dc540bf25ebb9388816c9a21ad693 147 Gene3D G3DSA:3.40.50.620 1 147 1.9E-33 T 01-11-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold CDA09_14710 53a46ee632e969468e90c1eaf73fa503 255 SUPERFAMILY SSF51735 3 249 1.8E-62 T 01-11-2018 IPR036291 NAD(P)-binding domain superfamily CDA09_14710 53a46ee632e969468e90c1eaf73fa503 255 Gene3D G3DSA:3.40.50.720 1 253 6.7E-74 T 01-11-2018 CDA09_14710 53a46ee632e969468e90c1eaf73fa503 255 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 148 176 - T 01-11-2018 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 CDA09_14710 53a46ee632e969468e90c1eaf73fa503 255 SMART SM00822 This enzymatic domain is part of bacterial polyketide synthases and catalyses the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain. It uses NADPH to reduce the keto group to a hydroxy group. 6 197 0.0042 T 01-11-2018 CDA09_14710 53a46ee632e969468e90c1eaf73fa503 255 Pfam PF00106 short chain dehydrogenase 8 205 3.3E-44 T 01-11-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CDA09_14710 53a46ee632e969468e90c1eaf73fa503 255 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 78 89 7.9E-10 T 01-11-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CDA09_14710 53a46ee632e969468e90c1eaf73fa503 255 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 141 149 7.9E-10 T 01-11-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CDA09_14710 53a46ee632e969468e90c1eaf73fa503 255 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 161 180 7.9E-10 T 01-11-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CDA09_14710 53a46ee632e969468e90c1eaf73fa503 255 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 78 89 3.2E-24 T 01-11-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CDA09_14710 53a46ee632e969468e90c1eaf73fa503 255 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 182 199 3.2E-24 T 01-11-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CDA09_14710 53a46ee632e969468e90c1eaf73fa503 255 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 7 24 3.2E-24 T 01-11-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CDA09_14710 53a46ee632e969468e90c1eaf73fa503 255 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 135 151 3.2E-24 T 01-11-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CDA09_14710 53a46ee632e969468e90c1eaf73fa503 255 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 161 180 3.2E-24 T 01-11-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CDA09_04125 288e81eec0b612ae78177063db440796 602 Pfam PF00916 Sulfate permease family 48 404 2.2E-66 T 01-11-2018 IPR011547 SLC26A/SulP transporter domain GO:0008272|GO:0015116|GO:0016021 CDA09_04125 288e81eec0b612ae78177063db440796 602 Pfam PF01740 STAS domain 465 567 2.1E-5 T 01-11-2018 IPR002645 STAS domain CDA09_04125 288e81eec0b612ae78177063db440796 602 Gene3D G3DSA:3.30.750.24 460 576 6.2E-18 T 01-11-2018 IPR036513 STAS domain superfamily CDA09_04125 288e81eec0b612ae78177063db440796 602 SUPERFAMILY SSF52091 463 571 2.94E-12 T 01-11-2018 IPR036513 STAS domain superfamily CDA09_10780 4e4e6a3fa428d28d91dce2fc63fadab4 298 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 89 284 4.1E-13 T 01-11-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 CDA09_10780 4e4e6a3fa428d28d91dce2fc63fadab4 298 Gene3D G3DSA:1.10.3720.10 65 288 5.3E-26 T 01-11-2018 IPR035906 MetI-like superfamily CDA09_10780 4e4e6a3fa428d28d91dce2fc63fadab4 298 SUPERFAMILY SSF161098 32 276 3.55E-27 T 01-11-2018 IPR035906 MetI-like superfamily CDA09_09885 5df0202a18ca99585c6f7878efd1e2c2 504 Gene3D G3DSA:3.30.300.310 401 503 9.1E-31 T 01-11-2018 CDA09_09885 5df0202a18ca99585c6f7878efd1e2c2 504 Pfam PF13193 AMP-binding enzyme C-terminal domain 412 487 3.2E-17 T 01-11-2018 IPR025110 AMP-binding enzyme, C-terminal domain CDA09_09885 5df0202a18ca99585c6f7878efd1e2c2 504 Gene3D G3DSA:3.40.50.12780 2 400 2.5E-80 T 01-11-2018 CDA09_09885 5df0202a18ca99585c6f7878efd1e2c2 504 SUPERFAMILY SSF56801 5 499 9.68E-117 T 01-11-2018 CDA09_09885 5df0202a18ca99585c6f7878efd1e2c2 504 Pfam PF00501 AMP-binding enzyme 8 403 1.1E-63 T 01-11-2018 IPR000873 AMP-dependent synthetase/ligase GO:0003824 CDA09_08000 107e18df1c41f11f9dc6b4daea1ec6cf 139 TIGRFAM TIGR04494 c550_PedF: cytochrome c-550 PedF 9 138 1.1E-63 T 01-11-2018 IPR030991 Cytochrome c-550 PedF CDA09_08000 107e18df1c41f11f9dc6b4daea1ec6cf 139 Gene3D G3DSA:1.10.760.10 43 139 1.3E-19 T 01-11-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 CDA09_08000 107e18df1c41f11f9dc6b4daea1ec6cf 139 Pfam PF13442 Cytochrome C oxidase, cbb3-type, subunit III 56 133 9.9E-14 T 01-11-2018 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 Reactome: R-HSA-111457|Reactome: R-HSA-111458|Reactome: R-HSA-111459|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 CDA09_08000 107e18df1c41f11f9dc6b4daea1ec6cf 139 SUPERFAMILY SSF46626 8 135 9.31E-22 T 01-11-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 CDA09_06330 a6e42f1bdd84ae4d17da480af9e5b827 440 Pfam PF13751 Transposase DDE domain 356 434 5.0E-17 T 01-11-2018 IPR025668 Transposase DDE domain CDA09_06330 a6e42f1bdd84ae4d17da480af9e5b827 440 Pfam PF05598 Transposase domain (DUF772) 56 123 4.6E-13 T 01-11-2018 IPR008490 Transposase InsH, N-terminal CDA09_01110 a6e42f1bdd84ae4d17da480af9e5b827 440 Pfam PF13751 Transposase DDE domain 356 434 5.0E-17 T 01-11-2018 IPR025668 Transposase DDE domain CDA09_01110 a6e42f1bdd84ae4d17da480af9e5b827 440 Pfam PF05598 Transposase domain (DUF772) 56 123 4.6E-13 T 01-11-2018 IPR008490 Transposase InsH, N-terminal CDA09_23015 cb214af76b33e5ccf2187f4e32161873 298 Gene3D G3DSA:2.30.140.10 4 67 4.1E-6 T 01-11-2018 IPR037163 Spermidine synthase, tetramerisation domain superfamily KEGG: 00270+2.5.1.16|KEGG: 00330+2.5.1.16|KEGG: 00410+2.5.1.16|KEGG: 00480+2.5.1.16|Reactome: R-HSA-351202 CDA09_23015 cb214af76b33e5ccf2187f4e32161873 298 Gene3D G3DSA:3.40.50.150 68 298 2.5E-72 T 01-11-2018 CDA09_23015 cb214af76b33e5ccf2187f4e32161873 298 SUPERFAMILY SSF53335 16 298 8.35E-76 T 01-11-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase CDA09_23015 cb214af76b33e5ccf2187f4e32161873 298 Hamap MF_00198 Polyamine aminopropyltransferase [speE]. 15 298 34.927 T 01-11-2018 IPR001045 Spermidine/spermine synthases GO:0003824 KEGG: 00270+2.5.1.16|KEGG: 00330+2.5.1.16|KEGG: 00410+2.5.1.16|KEGG: 00480+2.5.1.16|Reactome: R-HSA-351202 CDA09_23015 cb214af76b33e5ccf2187f4e32161873 298 Pfam PF01564 Spermine/spermidine synthase domain 70 250 3.0E-42 T 01-11-2018 CDA09_23015 cb214af76b33e5ccf2187f4e32161873 298 ProSitePatterns PS01330 Polyamine biosynthesis (PABS) domain signature. 91 104 - T 01-11-2018 IPR030373 Polyamine biosynthesis domain, conserved site KEGG: 00270+2.5.1.16|KEGG: 00330+2.5.1.16|KEGG: 00410+2.5.1.16|KEGG: 00480+2.5.1.16|Reactome: R-HSA-351202 CDA09_20520 1f0b3d5ac6e394333ccffe02b78c88d5 435 Pfam PF03349 Outer membrane protein transport protein (OMPP1/FadL/TodX) 16 435 1.8E-104 T 01-11-2018 IPR005017 Outer membrane protein transport protein (OMPP1/FadL/TodX) CDA09_20520 1f0b3d5ac6e394333ccffe02b78c88d5 435 Gene3D G3DSA:2.40.160.60 25 435 7.7E-129 T 01-11-2018 CDA09_20520 1f0b3d5ac6e394333ccffe02b78c88d5 435 SUPERFAMILY SSF56935 25 435 4.94E-93 T 01-11-2018 CDA09_18595 050d9af07d9480b67c4c8a10d727c161 547 SUPERFAMILY SSF56801 24 544 3.4E-136 T 01-11-2018 CDA09_18595 050d9af07d9480b67c4c8a10d727c161 547 TIGRFAM TIGR03208 cyc_hxne_CoA_lg: cyclohexanecarboxylate-CoA ligase 3 540 9.7E-283 T 01-11-2018 IPR017621 Cyclohexanecarboxylate-CoA ligase CDA09_18595 050d9af07d9480b67c4c8a10d727c161 547 Pfam PF13193 AMP-binding enzyme C-terminal domain 456 532 5.7E-12 T 01-11-2018 IPR025110 AMP-binding enzyme, C-terminal domain CDA09_18595 050d9af07d9480b67c4c8a10d727c161 547 ProSitePatterns PS00455 Putative AMP-binding domain signature. 202 213 - T 01-11-2018 IPR020845 AMP-binding, conserved site CDA09_18595 050d9af07d9480b67c4c8a10d727c161 547 Gene3D G3DSA:3.30.300.310 443 545 2.9E-26 T 01-11-2018 CDA09_18595 050d9af07d9480b67c4c8a10d727c161 547 Pfam PF00501 AMP-binding enzyme 33 447 1.2E-93 T 01-11-2018 IPR000873 AMP-dependent synthetase/ligase GO:0003824 CDA09_18595 050d9af07d9480b67c4c8a10d727c161 547 Gene3D G3DSA:3.40.50.12780 7 442 1.5E-104 T 01-11-2018 CDA09_11455 ef6d259375e376c8a9743db5cc4124df 341 Pfam PF02655 ATP-grasp domain 131 310 1.5E-23 T 01-11-2018 IPR003806 ATP-grasp fold, DUF201-type GO:0005524|GO:0046872 CDA09_11455 ef6d259375e376c8a9743db5cc4124df 341 Gene3D G3DSA:3.30.470.20 192 336 2.3E-27 T 01-11-2018 CDA09_11455 ef6d259375e376c8a9743db5cc4124df 341 PIRSF PIRSF016766 6 338 2.1E-50 T 01-11-2018 IPR024710 Tyramine--L-glutamate ligase KEGG: 00680+6.3.4.24|MetaCyc: PWY-5254 CDA09_11455 ef6d259375e376c8a9743db5cc4124df 341 SUPERFAMILY SSF56059 120 329 3.12E-16 T 01-11-2018 CDA09_08430 c88431d3994b5cd3b4c6f15e8db16ec0 185 SUPERFAMILY SSF69593 4 137 1.7E-17 T 01-11-2018 CDA09_08430 c88431d3994b5cd3b4c6f15e8db16ec0 185 SMART SM00563 25 137 2.8E-17 T 01-11-2018 IPR002123 Phospholipid/glycerol acyltransferase GO:0016746 CDA09_08430 c88431d3994b5cd3b4c6f15e8db16ec0 185 Pfam PF01553 Acyltransferase 23 128 9.7E-9 T 01-11-2018 IPR002123 Phospholipid/glycerol acyltransferase GO:0016746 CDA09_11090 1f065264287a30de7777b239f8b0f226 626 SMART SM00052 369 614 3.1E-107 T 01-11-2018 IPR001633 EAL domain CDA09_11090 1f065264287a30de7777b239f8b0f226 626 Pfam PF00990 Diguanylate cyclase, GGDEF domain 201 354 2.3E-24 T 01-11-2018 IPR000160 GGDEF domain CDA09_11090 1f065264287a30de7777b239f8b0f226 626 SUPERFAMILY SSF55781 8 182 5.23E-26 T 01-11-2018 CDA09_11090 1f065264287a30de7777b239f8b0f226 626 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 198 359 1.3E-16 T 01-11-2018 IPR000160 GGDEF domain CDA09_11090 1f065264287a30de7777b239f8b0f226 626 Gene3D G3DSA:3.30.450.40 10 196 8.6E-32 T 01-11-2018 IPR029016 GAF-like domain superfamily CDA09_11090 1f065264287a30de7777b239f8b0f226 626 SMART SM00065 9 191 1.0E-7 T 01-11-2018 IPR003018 GAF domain GO:0005515 CDA09_11090 1f065264287a30de7777b239f8b0f226 626 Gene3D G3DSA:3.30.70.270 202 371 1.1E-33 T 01-11-2018 CDA09_11090 1f065264287a30de7777b239f8b0f226 626 SUPERFAMILY SSF55073 206 359 5.57E-27 T 01-11-2018 IPR029787 Nucleotide cyclase CDA09_11090 1f065264287a30de7777b239f8b0f226 626 Pfam PF00563 EAL domain 375 609 6.8E-69 T 01-11-2018 IPR001633 EAL domain CDA09_11090 1f065264287a30de7777b239f8b0f226 626 Pfam PF13185 GAF domain 35 182 9.7E-19 T 01-11-2018 IPR003018 GAF domain GO:0005515 CDA09_11090 1f065264287a30de7777b239f8b0f226 626 SUPERFAMILY SSF141868 375 621 1.23E-86 T 01-11-2018 IPR035919 EAL domain superfamily CDA09_11090 1f065264287a30de7777b239f8b0f226 626 SMART SM00267 190 359 1.5E-20 T 01-11-2018 IPR000160 GGDEF domain CDA09_11090 1f065264287a30de7777b239f8b0f226 626 Gene3D G3DSA:3.20.20.450 372 620 7.7E-95 T 01-11-2018 IPR035919 EAL domain superfamily CDA09_22590 f7da468a02e1c97688007d5c9b7e6306 251 Gene3D G3DSA:3.90.226.10 1 251 5.1E-66 T 01-11-2018 CDA09_22590 f7da468a02e1c97688007d5c9b7e6306 251 ProSitePatterns PS00166 Enoyl-CoA hydratase/isomerase signature. 100 120 - T 01-11-2018 IPR018376 Enoyl-CoA hydratase/isomerase, conserved site GO:0003824 CDA09_22590 f7da468a02e1c97688007d5c9b7e6306 251 SUPERFAMILY SSF52096 2 250 6.97E-60 T 01-11-2018 IPR029045 ClpP/crotonase-like domain superfamily CDA09_22590 f7da468a02e1c97688007d5c9b7e6306 251 Pfam PF00378 Enoyl-CoA hydratase/isomerase 6 213 1.0E-39 T 01-11-2018 IPR001753 Enoyl-CoA hydratase/isomerase GO:0003824 CDA09_10835 ccb354fc7274865846803790b86c7885 368 SUPERFAMILY SSF55729 166 338 6.86E-21 T 01-11-2018 IPR016181 Acyl-CoA N-acyltransferase CDA09_10835 ccb354fc7274865846803790b86c7885 368 Pfam PF13480 Acetyltransferase (GNAT) domain 178 318 2.4E-13 T 01-11-2018 IPR038740 BioF2-like, acetyltransferase domain KEGG: 00780+2.3.1.47|MetaCyc: PWY-6519|MetaCyc: PWY-6578|MetaCyc: PWY-7147 CDA09_11055 606f2ada70afdee7f3f05df2578f5f34 340 SUPERFAMILY SSF53850 36 335 6.51E-88 T 01-11-2018 CDA09_11055 606f2ada70afdee7f3f05df2578f5f34 340 Gene3D G3DSA:3.40.190.10 36 335 1.9E-128 T 01-11-2018 CDA09_11055 606f2ada70afdee7f3f05df2578f5f34 340 Pfam PF04069 Substrate binding domain of ABC-type glycine betaine transport system 41 324 8.3E-58 T 01-11-2018 IPR007210 ABC-type glycine betaine transport system, substrate-binding domain GO:0022857|GO:0043190|GO:0055085 CDA09_11055 606f2ada70afdee7f3f05df2578f5f34 340 Gene3D G3DSA:3.40.190.100 124 264 1.9E-128 T 01-11-2018 CDA09_10050 be5f210a74f41996a744646f52a322a4 291 Gene3D G3DSA:3.30.390.50 182 291 5.0E-33 T 01-11-2018 CDA09_10050 be5f210a74f41996a744646f52a322a4 291 SMART SM01092 184 286 2.0E-25 T 01-11-2018 IPR005107 CO dehydrogenase flavoprotein, C-terminal CDA09_10050 be5f210a74f41996a744646f52a322a4 291 Gene3D G3DSA:3.30.43.10 1 60 2.0E-25 T 01-11-2018 IPR016167 FAD-binding, type PCMH, subdomain 1 CDA09_10050 be5f210a74f41996a744646f52a322a4 291 Pfam PF00941 FAD binding domain in molybdopterin dehydrogenase 5 177 8.0E-45 T 01-11-2018 IPR002346 Molybdopterin dehydrogenase, FAD-binding GO:0016491|GO:0055114 CDA09_10050 be5f210a74f41996a744646f52a322a4 291 SUPERFAMILY SSF56176 1 177 1.39E-50 T 01-11-2018 IPR036318 FAD-binding, type PCMH-like superfamily GO:0050660 CDA09_10050 be5f210a74f41996a744646f52a322a4 291 Pfam PF03450 CO dehydrogenase flavoprotein C-terminal domain 188 286 1.3E-18 T 01-11-2018 IPR005107 CO dehydrogenase flavoprotein, C-terminal CDA09_10050 be5f210a74f41996a744646f52a322a4 291 SUPERFAMILY SSF55447 183 289 6.15E-24 T 01-11-2018 IPR036683 CO dehydrogenase flavoprotein, C-terminal domain superfamily CDA09_10050 be5f210a74f41996a744646f52a322a4 291 Gene3D G3DSA:3.30.465.10 62 178 1.7E-36 T 01-11-2018 IPR016169 FAD-binding, type PCMH, subdomain 2 CDA09_00285 51626cd24c896583ba2e14f53672e5dc 461 ProSitePatterns PS00676 Sigma-54 interaction domain ATP-binding region B signature. 250 265 - T 01-11-2018 IPR025943 Sigma-54 interaction domain, ATP-binding site 2 CDA09_00285 51626cd24c896583ba2e14f53672e5dc 461 ProSitePatterns PS00688 Sigma-54 interaction domain C-terminal part signature. 377 386 - T 01-11-2018 IPR025944 Sigma-54 interaction domain, conserved site CDA09_00285 51626cd24c896583ba2e14f53672e5dc 461 Pfam PF02954 Bacterial regulatory protein, Fis family 416 453 1.4E-12 T 01-11-2018 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 CDA09_00285 51626cd24c896583ba2e14f53672e5dc 461 Gene3D G3DSA:1.10.10.60 414 453 1.0E-15 T 01-11-2018 CDA09_00285 51626cd24c896583ba2e14f53672e5dc 461 SMART SM00382 184 327 2.6E-11 T 01-11-2018 IPR003593 AAA+ ATPase domain CDA09_00285 51626cd24c896583ba2e14f53672e5dc 461 Pfam PF00158 Sigma-54 interaction domain 164 330 6.2E-67 T 01-11-2018 IPR002078 RNA polymerase sigma factor 54 interaction domain GO:0005524|GO:0006355|GO:0008134 CDA09_00285 51626cd24c896583ba2e14f53672e5dc 461 PRINTS PR01590 FIS bacterial regulatory protein HTH signature 439 459 5.1E-7 T 01-11-2018 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 CDA09_00285 51626cd24c896583ba2e14f53672e5dc 461 PRINTS PR01590 FIS bacterial regulatory protein HTH signature 422 439 5.1E-7 T 01-11-2018 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 CDA09_00285 51626cd24c896583ba2e14f53672e5dc 461 SUPERFAMILY SSF52172 23 209 1.38E-38 T 01-11-2018 IPR011006 CheY-like superfamily CDA09_00285 51626cd24c896583ba2e14f53672e5dc 461 Gene3D G3DSA:3.40.50.300 155 334 4.6E-65 T 01-11-2018 CDA09_00285 51626cd24c896583ba2e14f53672e5dc 461 SMART SM00448 23 134 3.5E-30 T 01-11-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 CDA09_00285 51626cd24c896583ba2e14f53672e5dc 461 Gene3D G3DSA:1.10.8.60 335 399 1.0E-18 T 01-11-2018 CDA09_00285 51626cd24c896583ba2e14f53672e5dc 461 SUPERFAMILY SSF46689 376 457 1.82E-13 T 01-11-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 CDA09_00285 51626cd24c896583ba2e14f53672e5dc 461 Pfam PF00072 Response regulator receiver domain 25 135 3.4E-24 T 01-11-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 CDA09_00285 51626cd24c896583ba2e14f53672e5dc 461 SUPERFAMILY SSF52540 164 396 1.33E-69 T 01-11-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CDA09_00285 51626cd24c896583ba2e14f53672e5dc 461 Gene3D G3DSA:3.40.50.2300 21 154 4.9E-30 T 01-11-2018 CDA09_15670 a9d4d6cebe097c3d850cbd938ee9c31d 461 Pfam PF07690 Major Facilitator Superfamily 30 324 7.0E-37 T 01-11-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 CDA09_15670 a9d4d6cebe097c3d850cbd938ee9c31d 461 ProSitePatterns PS00216 Sugar transport proteins signature 1. 79 95 - T 01-11-2018 IPR005829 Sugar transporter, conserved site GO:0005215|GO:0016021|GO:0055085 CDA09_15670 a9d4d6cebe097c3d850cbd938ee9c31d 461 Gene3D G3DSA:1.20.1250.20 259 438 1.3E-24 T 01-11-2018 CDA09_15670 a9d4d6cebe097c3d850cbd938ee9c31d 461 SUPERFAMILY SSF103473 10 434 8.76E-77 T 01-11-2018 IPR036259 MFS transporter superfamily CDA09_15670 a9d4d6cebe097c3d850cbd938ee9c31d 461 Gene3D G3DSA:1.20.1250.20 16 228 1.6E-37 T 01-11-2018 CDA09_01995 382c4850e93683ced3fc932fd381bed8 215 Pfam PF12146 Serine aminopeptidase, S33 44 143 1.5E-9 T 01-11-2018 IPR022742 Serine aminopeptidase, S33 CDA09_01995 382c4850e93683ced3fc932fd381bed8 215 SUPERFAMILY SSF53474 6 210 5.83E-42 T 01-11-2018 IPR029058 Alpha/Beta hydrolase fold CDA09_01995 382c4850e93683ced3fc932fd381bed8 215 Gene3D G3DSA:3.40.50.1820 3 213 6.6E-50 T 01-11-2018 IPR029058 Alpha/Beta hydrolase fold CDA09_20145 2a6562dea38bc8eeb4191a9e6033f358 709 Pfam PF00593 TonB dependent receptor 253 707 2.5E-50 T 01-11-2018 IPR000531 TonB-dependent receptor-like, beta-barrel CDA09_20145 2a6562dea38bc8eeb4191a9e6033f358 709 SUPERFAMILY SSF56935 52 709 2.24E-117 T 01-11-2018 CDA09_20145 2a6562dea38bc8eeb4191a9e6033f358 709 Gene3D G3DSA:2.170.130.10 56 179 2.4E-26 T 01-11-2018 IPR037066 TonB-dependent receptor, plug domain superfamily CDA09_20145 2a6562dea38bc8eeb4191a9e6033f358 709 Gene3D G3DSA:2.40.170.20 186 709 4.6E-98 T 01-11-2018 IPR036942 TonB-dependent receptor-like, beta-barrel domain superfamily CDA09_20145 2a6562dea38bc8eeb4191a9e6033f358 709 Pfam PF07715 TonB-dependent Receptor Plug Domain 70 173 1.5E-16 T 01-11-2018 IPR012910 TonB-dependent receptor, plug domain CDA09_20145 2a6562dea38bc8eeb4191a9e6033f358 709 TIGRFAM TIGR01783 TonB-siderophor: TonB-dependent siderophore receptor 72 709 1.5E-76 T 01-11-2018 IPR010105 TonB-dependent siderophore receptor GO:0005506|GO:0015891|GO:0038023 CDA09_20145 2a6562dea38bc8eeb4191a9e6033f358 709 ProSitePatterns PS01156 TonB-dependent receptor proteins signature 2. 692 709 - T 01-11-2018 IPR010917 TonB-dependent receptor, conserved site CDA09_12350 5fb03fd57225c25ccf8eb91499c005e5 434 SMART SM01091 348 428 7.0E-29 T 01-11-2018 IPR005170 Transporter-associated domain CDA09_12350 5fb03fd57225c25ccf8eb91499c005e5 434 Gene3D G3DSA:3.10.580.10 196 348 8.5E-34 T 01-11-2018 CDA09_12350 5fb03fd57225c25ccf8eb91499c005e5 434 SUPERFAMILY SSF56176 346 430 2.18E-22 T 01-11-2018 IPR036318 FAD-binding, type PCMH-like superfamily GO:0050660 CDA09_12350 5fb03fd57225c25ccf8eb91499c005e5 434 Pfam PF01595 Domain of unknown function DUF21 8 198 1.1E-38 T 01-11-2018 IPR002550 CNNM, transmembrane domain CDA09_12350 5fb03fd57225c25ccf8eb91499c005e5 434 Pfam PF03471 Transporter associated domain 349 427 3.3E-21 T 01-11-2018 IPR005170 Transporter-associated domain CDA09_12350 5fb03fd57225c25ccf8eb91499c005e5 434 Pfam PF00571 CBS domain 284 334 1.2E-4 T 01-11-2018 IPR000644 CBS domain CDA09_12350 5fb03fd57225c25ccf8eb91499c005e5 434 Gene3D G3DSA:3.30.465.10 349 428 6.1E-30 T 01-11-2018 IPR016169 FAD-binding, type PCMH, subdomain 2 CDA09_12350 5fb03fd57225c25ccf8eb91499c005e5 434 SUPERFAMILY SSF54631 202 337 3.31E-22 T 01-11-2018 CDA09_09165 8756942f04e6ddc82b166d80785afdba 531 Gene3D G3DSA:3.30.300.30 414 514 2.1E-22 T 01-11-2018 CDA09_09165 8756942f04e6ddc82b166d80785afdba 531 Pfam PF00501 AMP-binding enzyme 15 419 1.5E-76 T 01-11-2018 IPR000873 AMP-dependent synthetase/ligase GO:0003824 CDA09_09165 8756942f04e6ddc82b166d80785afdba 531 SUPERFAMILY SSF56801 5 514 8.24E-120 T 01-11-2018 CDA09_09165 8756942f04e6ddc82b166d80785afdba 531 ProSitePatterns PS00455 Putative AMP-binding domain signature. 174 185 - T 01-11-2018 IPR020845 AMP-binding, conserved site CDA09_09165 8756942f04e6ddc82b166d80785afdba 531 Gene3D G3DSA:3.40.50.12780 3 413 2.8E-88 T 01-11-2018 CDA09_09165 8756942f04e6ddc82b166d80785afdba 531 Pfam PF13193 AMP-binding enzyme C-terminal domain 428 501 1.2E-13 T 01-11-2018 IPR025110 AMP-binding enzyme, C-terminal domain CDA09_02910 3dad9d40e01bf2f31bdb0b2d13198496 394 Gene3D G3DSA:3.40.50.2300 2 144 5.5E-28 T 01-11-2018 CDA09_02910 3dad9d40e01bf2f31bdb0b2d13198496 394 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 145 309 2.8E-20 T 01-11-2018 IPR000160 GGDEF domain CDA09_02910 3dad9d40e01bf2f31bdb0b2d13198496 394 SUPERFAMILY SSF52172 10 166 4.7E-30 T 01-11-2018 IPR011006 CheY-like superfamily CDA09_02910 3dad9d40e01bf2f31bdb0b2d13198496 394 SMART SM00448 10 125 8.9E-29 T 01-11-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 CDA09_02910 3dad9d40e01bf2f31bdb0b2d13198496 394 SUPERFAMILY SSF55073 155 309 2.98E-20 T 01-11-2018 IPR029787 Nucleotide cyclase CDA09_02910 3dad9d40e01bf2f31bdb0b2d13198496 394 Pfam PF00990 Diguanylate cyclase, GGDEF domain 151 307 9.4E-19 T 01-11-2018 IPR000160 GGDEF domain CDA09_02910 3dad9d40e01bf2f31bdb0b2d13198496 394 SMART SM00267 138 311 4.7E-17 T 01-11-2018 IPR000160 GGDEF domain CDA09_02910 3dad9d40e01bf2f31bdb0b2d13198496 394 Gene3D G3DSA:3.30.70.270 145 313 9.2E-27 T 01-11-2018 CDA09_02910 3dad9d40e01bf2f31bdb0b2d13198496 394 Pfam PF00072 Response regulator receiver domain 12 125 8.5E-21 T 01-11-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 CDA09_17160 5817fdad29a3524cf3efab0cf922ff34 327 Pfam PF05598 Transposase domain (DUF772) 50 124 7.0E-21 T 01-11-2018 IPR008490 Transposase InsH, N-terminal CDA09_17160 5817fdad29a3524cf3efab0cf922ff34 327 Pfam PF01609 Transposase DDE domain 137 310 8.9E-30 T 01-11-2018 IPR002559 Transposase, IS4-like GO:0003677|GO:0004803|GO:0006313 CDA09_01815 cb82c6a5130362b7bc7bb616c68e31ca 608 ProSitePatterns PS00194 Thioredoxin family active site. 515 533 - T 01-11-2018 IPR017937 Thioredoxin, conserved site GO:0045454 CDA09_01815 cb82c6a5130362b7bc7bb616c68e31ca 608 Gene3D G3DSA:2.60.40.1250 21 153 1.2E-32 T 01-11-2018 IPR036929 Thiol:disulfide interchange protein DsbD, N-terminal domain superfamily CDA09_01815 cb82c6a5130362b7bc7bb616c68e31ca 608 SUPERFAMILY SSF74863 27 143 2.22E-28 T 01-11-2018 IPR036929 Thiol:disulfide interchange protein DsbD, N-terminal domain superfamily CDA09_01815 cb82c6a5130362b7bc7bb616c68e31ca 608 Gene3D G3DSA:3.40.30.10 483 606 4.0E-28 T 01-11-2018 CDA09_01815 cb82c6a5130362b7bc7bb616c68e31ca 608 Pfam PF11412 Disulphide bond corrector protein DsbC 29 142 2.9E-27 T 01-11-2018 IPR028250 Thiol:disulfide interchange protein DsbD, N-terminal domain CDA09_01815 cb82c6a5130362b7bc7bb616c68e31ca 608 Pfam PF13899 Thioredoxin-like 499 558 1.4E-9 T 01-11-2018 CDA09_01815 cb82c6a5130362b7bc7bb616c68e31ca 608 SUPERFAMILY SSF52833 491 603 1.85E-22 T 01-11-2018 IPR036249 Thioredoxin-like superfamily CDA09_01815 cb82c6a5130362b7bc7bb616c68e31ca 608 Pfam PF02683 Cytochrome C biogenesis protein transmembrane region 198 404 2.8E-17 T 01-11-2018 IPR003834 Cytochrome C biogenesis protein, transmembrane domain GO:0016020|GO:0017004|GO:0055114 CDA09_01815 cb82c6a5130362b7bc7bb616c68e31ca 608 Hamap MF_00399 Thiol:disulfide interchange protein DsbD [dsbD]. 1 607 34.952 T 01-11-2018 IPR022910 Thiol:disulphide interchange protein DsbD GO:0047134|GO:0055114 CDA09_13160 7e81bf29a992d80648c1e63926fdb0cd 171 Gene3D G3DSA:3.40.50.300 5 157 1.3E-61 T 01-11-2018 CDA09_13160 7e81bf29a992d80648c1e63926fdb0cd 171 TIGRFAM TIGR00176 mobB: molybdopterin-guanine dinucleotide biosynthesis protein B 3 159 3.6E-50 T 01-11-2018 IPR004435 Molybdopterin-guanine dinucleotide biosynthesis protein B (MobB) domain GO:0005525|GO:0006777 CDA09_13160 7e81bf29a992d80648c1e63926fdb0cd 171 Gene3D G3DSA:2.20.25.120 47 79 1.3E-61 T 01-11-2018 CDA09_13160 7e81bf29a992d80648c1e63926fdb0cd 171 Pfam PF03205 Molybdopterin guanine dinucleotide synthesis protein B 3 135 3.2E-54 T 01-11-2018 IPR004435 Molybdopterin-guanine dinucleotide biosynthesis protein B (MobB) domain GO:0005525|GO:0006777 CDA09_13160 7e81bf29a992d80648c1e63926fdb0cd 171 SUPERFAMILY SSF52540 1 160 2.2E-28 T 01-11-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CDA09_20030 4944a08e4afdc7a177de5fcd8a7ff4c8 316 Pfam PF00482 Type II secretion system (T2SS), protein F 167 295 3.3E-19 T 01-11-2018 IPR018076 Type II secretion system F domain CDA09_06930 d7d04ab3d3125153abfc50da8e5b88b4 199 PIRSF PIRSF000005 2 199 1.7E-51 T 01-11-2018 IPR024167 Cytochrome c4-like GO:0005506|GO:0009055|GO:0020037|GO:0042597 CDA09_06930 d7d04ab3d3125153abfc50da8e5b88b4 199 Pfam PF13442 Cytochrome C oxidase, cbb3-type, subunit III 25 96 1.4E-6 T 01-11-2018 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 Reactome: R-HSA-111457|Reactome: R-HSA-111458|Reactome: R-HSA-111459|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 CDA09_06930 d7d04ab3d3125153abfc50da8e5b88b4 199 SUPERFAMILY SSF46626 28 98 1.27E-15 T 01-11-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 CDA09_06930 d7d04ab3d3125153abfc50da8e5b88b4 199 Pfam PF00034 Cytochrome c 130 172 1.2E-5 T 01-11-2018 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 Reactome: R-HSA-111457|Reactome: R-HSA-111458|Reactome: R-HSA-111459|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 CDA09_06930 d7d04ab3d3125153abfc50da8e5b88b4 199 Gene3D G3DSA:1.10.760.10 25 100 1.3E-20 T 01-11-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 CDA09_06930 d7d04ab3d3125153abfc50da8e5b88b4 199 Gene3D G3DSA:1.10.760.10 107 198 4.1E-21 T 01-11-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 CDA09_06930 d7d04ab3d3125153abfc50da8e5b88b4 199 SUPERFAMILY SSF46626 109 195 3.69E-18 T 01-11-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 CDA09_05130 3cd42e5085e4ae427fa8758f2b4cf145 354 SUPERFAMILY SSF51569 3 329 1.45E-109 T 01-11-2018 CDA09_05130 3cd42e5085e4ae427fa8758f2b4cf145 354 ProSitePatterns PS00602 Fructose-bisphosphate aldolase class-II signature 1. 73 85 - T 01-11-2018 IPR000771 Fructose-bisphosphate aldolase, class-II GO:0005975|GO:0008270|GO:0016832 CDA09_05130 3cd42e5085e4ae427fa8758f2b4cf145 354 PIRSF PIRSF001359 1 329 8.5E-86 T 01-11-2018 IPR000771 Fructose-bisphosphate aldolase, class-II GO:0005975|GO:0008270|GO:0016832 CDA09_05130 3cd42e5085e4ae427fa8758f2b4cf145 354 Gene3D G3DSA:3.20.20.70 1 354 1.2E-153 T 01-11-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 CDA09_05130 3cd42e5085e4ae427fa8758f2b4cf145 354 Pfam PF01116 Fructose-bisphosphate aldolase class-II 4 328 3.1E-96 T 01-11-2018 IPR000771 Fructose-bisphosphate aldolase, class-II GO:0005975|GO:0008270|GO:0016832 CDA09_05130 3cd42e5085e4ae427fa8758f2b4cf145 354 TIGRFAM TIGR00167 cbbA: ketose-bisphosphate aldolase 1 329 4.9E-100 T 01-11-2018 IPR000771 Fructose-bisphosphate aldolase, class-II GO:0005975|GO:0008270|GO:0016832 CDA09_05130 3cd42e5085e4ae427fa8758f2b4cf145 354 TIGRFAM TIGR01521 FruBisAldo_II_B: fructose-bisphosphate aldolase, class II, Calvin cycle subtype 3 349 2.1E-188 T 01-11-2018 IPR006412 Fructose-bisphosphate aldolase, class II, Calvin cycle subtype GO:0004332|GO:0006096 KEGG: 00010+4.1.2.13|KEGG: 00030+4.1.2.13|KEGG: 00051+4.1.2.13|KEGG: 00680+4.1.2.13|KEGG: 00710+4.1.2.13|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-6142|MetaCyc: PWY-7385 CDA09_05130 3cd42e5085e4ae427fa8758f2b4cf145 354 ProSitePatterns PS00806 Fructose-bisphosphate aldolase class-II signature 2. 139 150 - T 01-11-2018 IPR000771 Fructose-bisphosphate aldolase, class-II GO:0005975|GO:0008270|GO:0016832 CDA09_22545 9273967064a9ddcac900e69a5c4d0703 168 SUPERFAMILY SSF55729 14 149 6.35E-17 T 01-11-2018 IPR016181 Acyl-CoA N-acyltransferase CDA09_22545 9273967064a9ddcac900e69a5c4d0703 168 Gene3D G3DSA:3.40.630.30 4 161 1.2E-41 T 01-11-2018 CDA09_22545 9273967064a9ddcac900e69a5c4d0703 168 Pfam PF13673 Acetyltransferase (GNAT) domain 37 150 1.3E-9 T 01-11-2018 IPR000182 GNAT domain CDA09_04755 33e271aa71999469805dba45dee7d4b3 326 Pfam PF03547 Membrane transport protein 161 313 4.0E-13 T 01-11-2018 IPR004776 Membrane transport protein GO:0016021|GO:0055085 CDA09_04755 33e271aa71999469805dba45dee7d4b3 326 Pfam PF03547 Membrane transport protein 10 144 2.4E-14 T 01-11-2018 IPR004776 Membrane transport protein GO:0016021|GO:0055085 CDA09_11920 b7d7527189e70d3f9dc2e7811bc1d5f7 153 Pfam PF00075 RNase H 2 140 1.8E-49 T 01-11-2018 IPR002156 Ribonuclease H domain GO:0003676|GO:0004523 CDA09_11920 b7d7527189e70d3f9dc2e7811bc1d5f7 153 Hamap MF_00042 Ribonuclease H [rnhA]. 1 149 34.952 T 01-11-2018 IPR022892 Ribonuclease HI GO:0004523 CDA09_11920 b7d7527189e70d3f9dc2e7811bc1d5f7 153 SUPERFAMILY SSF53098 2 140 1.52E-56 T 01-11-2018 IPR012337 Ribonuclease H-like superfamily CDA09_11920 b7d7527189e70d3f9dc2e7811bc1d5f7 153 Gene3D G3DSA:3.30.420.10 1 150 5.3E-58 T 01-11-2018 IPR036397 Ribonuclease H superfamily GO:0003676 CDA09_16760 d0c99250c46cdcf4df82df91fb97964a 112 SMART SM00938 4 105 1.9E-70 T 01-11-2018 IPR002187 Nitrogen regulatory protein PII GO:0006808|GO:0030234 CDA09_16760 d0c99250c46cdcf4df82df91fb97964a 112 SUPERFAMILY SSF54913 1 112 4.77E-48 T 01-11-2018 IPR011322 Nitrogen regulatory PII-like, alpha/beta CDA09_16760 d0c99250c46cdcf4df82df91fb97964a 112 ProSitePatterns PS00638 P-II protein C-terminal region signature. 83 96 - T 01-11-2018 IPR017918 Nitrogen regulatory protein PII, conserved site GO:0006808|GO:0030234 CDA09_16760 d0c99250c46cdcf4df82df91fb97964a 112 ProSitePatterns PS00496 P-II protein uridylation site. 46 51 - T 01-11-2018 IPR002332 Nitrogen regulatory protein P-II, urydylation site GO:0006808|GO:0030234 CDA09_16760 d0c99250c46cdcf4df82df91fb97964a 112 Pfam PF00543 Nitrogen regulatory protein P-II 4 105 3.3E-45 T 01-11-2018 IPR002187 Nitrogen regulatory protein PII GO:0006808|GO:0030234 CDA09_16760 d0c99250c46cdcf4df82df91fb97964a 112 Gene3D G3DSA:3.30.70.120 1 112 5.9E-50 T 01-11-2018 IPR015867 Nitrogen regulatory protein PII/ATP phosphoribosyltransferase, C-terminal CDA09_16760 d0c99250c46cdcf4df82df91fb97964a 112 PIRSF PIRSF039144 1 112 1.1E-57 T 01-11-2018 IPR002187 Nitrogen regulatory protein PII GO:0006808|GO:0030234 CDA09_16760 d0c99250c46cdcf4df82df91fb97964a 112 PRINTS PR00340 P-II protein signature 23 41 3.0E-46 T 01-11-2018 IPR002187 Nitrogen regulatory protein PII GO:0006808|GO:0030234 CDA09_16760 d0c99250c46cdcf4df82df91fb97964a 112 PRINTS PR00340 P-II protein signature 83 103 3.0E-46 T 01-11-2018 IPR002187 Nitrogen regulatory protein PII GO:0006808|GO:0030234 CDA09_16760 d0c99250c46cdcf4df82df91fb97964a 112 PRINTS PR00340 P-II protein signature 2 17 3.0E-46 T 01-11-2018 IPR002187 Nitrogen regulatory protein PII GO:0006808|GO:0030234 CDA09_16760 d0c99250c46cdcf4df82df91fb97964a 112 PRINTS PR00340 P-II protein signature 52 75 3.0E-46 T 01-11-2018 IPR002187 Nitrogen regulatory protein PII GO:0006808|GO:0030234 CDA09_13755 2fb18da4fdb5b3102d1e770c44cf90f4 416 Gene3D G3DSA:1.10.150.130 121 211 7.2E-6 T 01-11-2018 IPR010998 Integrase/recombinase, N-terminal CDA09_13755 2fb18da4fdb5b3102d1e770c44cf90f4 416 Gene3D G3DSA:1.10.443.10 228 407 3.3E-36 T 01-11-2018 IPR013762 Integrase-like, catalytic domain superfamily GO:0003677|GO:0006310|GO:0015074 CDA09_13755 2fb18da4fdb5b3102d1e770c44cf90f4 416 Pfam PF02899 Phage integrase, N-terminal SAM-like domain 124 204 7.7E-6 T 01-11-2018 IPR004107 Integrase, SAM-like, N-terminal GO:0003677|GO:0015074 CDA09_13755 2fb18da4fdb5b3102d1e770c44cf90f4 416 SUPERFAMILY SSF56349 224 408 4.12E-36 T 01-11-2018 IPR011010 DNA breaking-rejoining enzyme, catalytic core GO:0003677 CDA09_13755 2fb18da4fdb5b3102d1e770c44cf90f4 416 Pfam PF00589 Phage integrase family 237 400 3.6E-20 T 01-11-2018 IPR002104 Integrase, catalytic domain GO:0003677|GO:0006310|GO:0015074 CDA09_13770 2fb18da4fdb5b3102d1e770c44cf90f4 416 Gene3D G3DSA:1.10.150.130 121 211 7.2E-6 T 01-11-2018 IPR010998 Integrase/recombinase, N-terminal CDA09_13770 2fb18da4fdb5b3102d1e770c44cf90f4 416 Gene3D G3DSA:1.10.443.10 228 407 3.3E-36 T 01-11-2018 IPR013762 Integrase-like, catalytic domain superfamily GO:0003677|GO:0006310|GO:0015074 CDA09_13770 2fb18da4fdb5b3102d1e770c44cf90f4 416 Pfam PF02899 Phage integrase, N-terminal SAM-like domain 124 204 7.7E-6 T 01-11-2018 IPR004107 Integrase, SAM-like, N-terminal GO:0003677|GO:0015074 CDA09_13770 2fb18da4fdb5b3102d1e770c44cf90f4 416 SUPERFAMILY SSF56349 224 408 4.12E-36 T 01-11-2018 IPR011010 DNA breaking-rejoining enzyme, catalytic core GO:0003677 CDA09_13770 2fb18da4fdb5b3102d1e770c44cf90f4 416 Pfam PF00589 Phage integrase family 237 400 3.6E-20 T 01-11-2018 IPR002104 Integrase, catalytic domain GO:0003677|GO:0006310|GO:0015074 CDA09_06130 4e1be368d52a3b8cffb0d5db368b6a0d 263 Pfam PF01066 CDP-alcohol phosphatidyltransferase 16 79 4.0E-13 T 01-11-2018 IPR000462 CDP-alcohol phosphatidyltransferase GO:0008654|GO:0016020|GO:0016780 CDA09_06130 4e1be368d52a3b8cffb0d5db368b6a0d 263 TIGRFAM TIGR00473 pssA: CDP-diacylglycerol-serine O-phosphatidyltransferase 23 183 9.1E-34 T 01-11-2018 IPR004533 CDP-diacylglycerol--serine O-phosphatidyltransferase KEGG: 00260+2.7.8.8|KEGG: 00564+2.7.8.8|MetaCyc: PWY-5669 CDA09_06130 4e1be368d52a3b8cffb0d5db368b6a0d 263 Gene3D G3DSA:1.20.120.1760 9 135 1.8E-15 T 01-11-2018 CDA09_06130 4e1be368d52a3b8cffb0d5db368b6a0d 263 ProSitePatterns PS00379 CDP-alcohol phosphatidyltransferases signature. 57 79 - T 01-11-2018 IPR000462 CDP-alcohol phosphatidyltransferase GO:0008654|GO:0016020|GO:0016780 CDA09_13780 4d22fea9a88179d4554654cd7bc697b6 332 Gene3D G3DSA:1.10.150.130 11 107 2.1E-13 T 01-11-2018 IPR010998 Integrase/recombinase, N-terminal CDA09_13780 4d22fea9a88179d4554654cd7bc697b6 332 Pfam PF00589 Phage integrase family 126 298 8.9E-29 T 01-11-2018 IPR002104 Integrase, catalytic domain GO:0003677|GO:0006310|GO:0015074 CDA09_13780 4d22fea9a88179d4554654cd7bc697b6 332 Pfam PF02899 Phage integrase, N-terminal SAM-like domain 15 98 2.7E-14 T 01-11-2018 IPR004107 Integrase, SAM-like, N-terminal GO:0003677|GO:0015074 CDA09_13780 4d22fea9a88179d4554654cd7bc697b6 332 SUPERFAMILY SSF56349 7 306 2.44E-44 T 01-11-2018 IPR011010 DNA breaking-rejoining enzyme, catalytic core GO:0003677 CDA09_13780 4d22fea9a88179d4554654cd7bc697b6 332 Gene3D G3DSA:1.10.443.10 125 305 1.0E-43 T 01-11-2018 IPR013762 Integrase-like, catalytic domain superfamily GO:0003677|GO:0006310|GO:0015074 CDA09_13745 4d22fea9a88179d4554654cd7bc697b6 332 Gene3D G3DSA:1.10.150.130 11 107 2.1E-13 T 01-11-2018 IPR010998 Integrase/recombinase, N-terminal CDA09_13745 4d22fea9a88179d4554654cd7bc697b6 332 Pfam PF00589 Phage integrase family 126 298 8.9E-29 T 01-11-2018 IPR002104 Integrase, catalytic domain GO:0003677|GO:0006310|GO:0015074 CDA09_13745 4d22fea9a88179d4554654cd7bc697b6 332 Pfam PF02899 Phage integrase, N-terminal SAM-like domain 15 98 2.7E-14 T 01-11-2018 IPR004107 Integrase, SAM-like, N-terminal GO:0003677|GO:0015074 CDA09_13745 4d22fea9a88179d4554654cd7bc697b6 332 SUPERFAMILY SSF56349 7 306 2.44E-44 T 01-11-2018 IPR011010 DNA breaking-rejoining enzyme, catalytic core GO:0003677 CDA09_13745 4d22fea9a88179d4554654cd7bc697b6 332 Gene3D G3DSA:1.10.443.10 125 305 1.0E-43 T 01-11-2018 IPR013762 Integrase-like, catalytic domain superfamily GO:0003677|GO:0006310|GO:0015074 CDA09_16220 67379ba79a1692845c9c8508dceef495 201 ProDom PD001581 OXIDOREDUCTASE SUBUNIT NADH DEHYDROGENASE CHAIN C NAD DEHYDROGENASE UBIQUINONE F420H2 87 148 1.0E-22 T 01-11-2018 IPR001268 NADH:ubiquinone oxidoreductase, 30kDa subunit GO:0008137|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 CDA09_16220 67379ba79a1692845c9c8508dceef495 201 Pfam PF00329 Respiratory-chain NADH dehydrogenase, 30 Kd subunit 33 161 1.6E-43 T 01-11-2018 IPR001268 NADH:ubiquinone oxidoreductase, 30kDa subunit GO:0008137|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 CDA09_16220 67379ba79a1692845c9c8508dceef495 201 ProSitePatterns PS00542 Respiratory chain NADH dehydrogenase 30 Kd subunit signature. 121 142 - T 01-11-2018 IPR020396 NADH:ubiquinone oxidoreductase, 30kDa subunit, conserved site GO:0016651|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 CDA09_16220 67379ba79a1692845c9c8508dceef495 201 SUPERFAMILY SSF143243 8 183 1.2E-55 T 01-11-2018 IPR037232 NADH:ubiquinone oxidoreductase, 30kDa subunit superfamily Reactome: R-HSA-611105|Reactome: R-HSA-6799198 CDA09_16220 67379ba79a1692845c9c8508dceef495 201 Hamap MF_01357 NAD(P)H-quinone oxidoreductase subunit J, chloroplastic [ndhJ]. 8 168 34.487 T 01-11-2018 IPR010218 NADH dehydrogenase, subunit C GO:0016651|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 CDA09_16220 67379ba79a1692845c9c8508dceef495 201 TIGRFAM TIGR01961 NuoC_fam: NADH (or F420H2) dehydrogenase, subunit C 31 160 2.4E-40 T 01-11-2018 IPR010218 NADH dehydrogenase, subunit C GO:0016651|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 CDA09_16220 67379ba79a1692845c9c8508dceef495 201 Gene3D G3DSA:3.30.460.80 1 140 8.7E-44 T 01-11-2018 IPR037232 NADH:ubiquinone oxidoreductase, 30kDa subunit superfamily Reactome: R-HSA-611105|Reactome: R-HSA-6799198 CDA09_10825 b2cd98716fd51806d0e90b8a2ac654db 406 PIRSF PIRSF000390 270 406 0.054 T 01-11-2018 IPR000653 DegT/DnrJ/EryC1/StrS aminotransferase CDA09_10825 b2cd98716fd51806d0e90b8a2ac654db 406 PIRSF PIRSF000390 27 206 8.9E-35 T 01-11-2018 IPR000653 DegT/DnrJ/EryC1/StrS aminotransferase CDA09_10825 b2cd98716fd51806d0e90b8a2ac654db 406 SUPERFAMILY SSF53383 29 403 2.85E-43 T 01-11-2018 IPR015424 Pyridoxal phosphate-dependent transferase CDA09_10825 b2cd98716fd51806d0e90b8a2ac654db 406 Gene3D G3DSA:3.90.1150.10 274 406 2.1E-10 T 01-11-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 CDA09_10825 b2cd98716fd51806d0e90b8a2ac654db 406 Gene3D G3DSA:3.40.640.10 27 207 9.0E-41 T 01-11-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 CDA09_10825 b2cd98716fd51806d0e90b8a2ac654db 406 Pfam PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family 32 201 7.0E-33 T 01-11-2018 IPR000653 DegT/DnrJ/EryC1/StrS aminotransferase CDA09_04710 d2bdab68aa0ce30af5dd02cc73a55e2a 633 TIGRFAM TIGR00786 dctM: TRAP transporter, DctM subunit 229 631 3.4E-86 T 01-11-2018 IPR004681 TRAP transporter large membrane protein DctM GO:0016021 CDA09_04710 d2bdab68aa0ce30af5dd02cc73a55e2a 633 Pfam PF04290 Tripartite ATP-independent periplasmic transporters, DctQ component 53 178 3.2E-25 T 01-11-2018 IPR007387 TRAP transporter, small membrane protein DctQ CDA09_04710 d2bdab68aa0ce30af5dd02cc73a55e2a 633 Pfam PF06808 Tripartite ATP-independent periplasmic transporter, DctM component 220 628 4.4E-95 T 01-11-2018 IPR010656 TRAP C4-dicarboxylate transport system permease DctM subunit CDA09_08825 7ed2dd11b3dca29f0c1113b02f015ad2 74 Pfam PF10932 Protein of unknown function (DUF2783) 3 72 1.2E-31 T 01-11-2018 IPR021233 Protein of unknown function DUF2783 CDA09_02660 47223d83c53991a31c6e07916b754eda 196 Gene3D G3DSA:1.10.340.30 2 187 2.0E-78 T 01-11-2018 CDA09_02660 47223d83c53991a31c6e07916b754eda 196 Pfam PF03352 Methyladenine glycosylase 7 182 7.7E-75 T 01-11-2018 IPR005019 Methyladenine glycosylase GO:0006284|GO:0008725 CDA09_02660 47223d83c53991a31c6e07916b754eda 196 TIGRFAM TIGR00624 tag: DNA-3-methyladenine glycosylase I 3 181 5.8E-78 T 01-11-2018 IPR004597 DNA-3-methyladenine glycosylase I GO:0006284|GO:0008725 CDA09_02660 47223d83c53991a31c6e07916b754eda 196 SUPERFAMILY SSF48150 3 186 1.52E-75 T 01-11-2018 IPR011257 DNA glycosylase GO:0003824|GO:0006281 Reactome: R-HSA-110357 CDA09_21200 7d61e1abc63c4acd0da4cf2ecdf9ca28 258 ProSitePatterns PS00211 ABC transporters family signature. 153 167 - T 01-11-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 CDA09_21200 7d61e1abc63c4acd0da4cf2ecdf9ca28 258 Pfam PF00005 ABC transporter 20 180 2.4E-30 T 01-11-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 CDA09_21200 7d61e1abc63c4acd0da4cf2ecdf9ca28 258 Gene3D G3DSA:3.40.50.300 1 252 1.6E-59 T 01-11-2018 CDA09_21200 7d61e1abc63c4acd0da4cf2ecdf9ca28 258 Pfam PF12399 Branched-chain amino acid ATP-binding cassette transporter 229 251 4.7E-8 T 01-11-2018 IPR032823 Branched-chain amino acid ATP-binding cassette transporter, C-terminal CDA09_21200 7d61e1abc63c4acd0da4cf2ecdf9ca28 258 SUPERFAMILY SSF52540 4 251 3.09E-61 T 01-11-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CDA09_21200 7d61e1abc63c4acd0da4cf2ecdf9ca28 258 SMART SM00382 29 237 7.2E-8 T 01-11-2018 IPR003593 AAA+ ATPase domain CDA09_02750 d50e91176161b7db1de75b78e5c72c7e 261 Gene3D G3DSA:1.10.10.10 11 83 4.3E-23 T 01-11-2018 IPR036388 Winged helix-like DNA-binding domain superfamily CDA09_02750 d50e91176161b7db1de75b78e5c72c7e 261 Pfam PF01614 Bacterial transcriptional regulator 131 251 2.1E-29 T 01-11-2018 IPR014757 Transcription regulator IclR, C-terminal CDA09_02750 d50e91176161b7db1de75b78e5c72c7e 261 SUPERFAMILY SSF46785 13 85 2.66E-18 T 01-11-2018 IPR036390 Winged helix DNA-binding domain superfamily CDA09_02750 d50e91176161b7db1de75b78e5c72c7e 261 SMART SM00346 13 102 6.7E-25 T 01-11-2018 IPR005471 Transcription regulator IclR, N-terminal GO:0003677|GO:0006355 CDA09_02750 d50e91176161b7db1de75b78e5c72c7e 261 Pfam PF09339 IclR helix-turn-helix domain 16 64 1.2E-14 T 01-11-2018 IPR005471 Transcription regulator IclR, N-terminal GO:0003677|GO:0006355 CDA09_02750 d50e91176161b7db1de75b78e5c72c7e 261 Gene3D G3DSA:3.30.450.40 84 260 9.7E-55 T 01-11-2018 IPR029016 GAF-like domain superfamily CDA09_02750 d50e91176161b7db1de75b78e5c72c7e 261 SUPERFAMILY SSF55781 70 255 9.16E-48 T 01-11-2018 CDA09_02410 ce0d8cda4cb53f56ed38b98b8457714f 289 Pfam PF03279 Bacterial lipid A biosynthesis acyltransferase 6 275 2.5E-35 T 01-11-2018 IPR004960 Bacterial lipid A biosynthesis acyltransferase GO:0016021|GO:0016740 CDA09_02410 ce0d8cda4cb53f56ed38b98b8457714f 289 PIRSF PIRSF026649 2 284 6.8E-72 T 01-11-2018 IPR004960 Bacterial lipid A biosynthesis acyltransferase GO:0016021|GO:0016740 CDA09_05115 06cf7fd289314ab7a79495bb3c0e161b 856 SMART SM00267 423 596 2.6E-55 T 01-11-2018 IPR000160 GGDEF domain CDA09_05115 06cf7fd289314ab7a79495bb3c0e161b 856 Pfam PF00563 EAL domain 617 844 2.4E-62 T 01-11-2018 IPR001633 EAL domain CDA09_05115 06cf7fd289314ab7a79495bb3c0e161b 856 SUPERFAMILY SSF141868 615 847 1.57E-69 T 01-11-2018 IPR035919 EAL domain superfamily CDA09_05115 06cf7fd289314ab7a79495bb3c0e161b 856 Gene3D G3DSA:3.30.70.270 428 601 1.5E-51 T 01-11-2018 CDA09_05115 06cf7fd289314ab7a79495bb3c0e161b 856 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 430 595 1.0E-51 T 01-11-2018 IPR000160 GGDEF domain CDA09_05115 06cf7fd289314ab7a79495bb3c0e161b 856 Gene3D G3DSA:3.20.20.450 613 854 7.6E-72 T 01-11-2018 IPR035919 EAL domain superfamily CDA09_05115 06cf7fd289314ab7a79495bb3c0e161b 856 SUPERFAMILY SSF55073 439 595 2.28E-45 T 01-11-2018 IPR029787 Nucleotide cyclase CDA09_05115 06cf7fd289314ab7a79495bb3c0e161b 856 Pfam PF00990 Diguanylate cyclase, GGDEF domain 434 591 8.9E-45 T 01-11-2018 IPR000160 GGDEF domain CDA09_05115 06cf7fd289314ab7a79495bb3c0e161b 856 SMART SM00052 607 849 6.1E-62 T 01-11-2018 IPR001633 EAL domain CDA09_06230 7a0d52c69d6c7823365cc8004c61ab63 348 SUPERFAMILY SSF55326 8 171 1.23E-53 T 01-11-2018 IPR036921 PurM-like, N-terminal domain superfamily CDA09_06230 7a0d52c69d6c7823365cc8004c61ab63 348 Gene3D G3DSA:3.30.1330.10 7 171 7.9E-69 T 01-11-2018 IPR036921 PurM-like, N-terminal domain superfamily CDA09_06230 7a0d52c69d6c7823365cc8004c61ab63 348 TIGRFAM TIGR00878 purM: phosphoribosylformylglycinamidine cyclo-ligase 8 337 3.2E-138 T 01-11-2018 IPR004733 Phosphoribosylformylglycinamidine cyclo-ligase GO:0004641|GO:0005737|GO:0006189 KEGG: 00230+6.3.3.1|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|Reactome: R-HSA-73817 CDA09_06230 7a0d52c69d6c7823365cc8004c61ab63 348 Gene3D G3DSA:3.90.650.10 172 347 3.4E-67 T 01-11-2018 IPR036676 PurM-like, C-terminal domain superfamily CDA09_06230 7a0d52c69d6c7823365cc8004c61ab63 348 Pfam PF02769 AIR synthase related protein, C-terminal domain 177 342 1.2E-34 T 01-11-2018 IPR010918 PurM-like, C-terminal domain CDA09_06230 7a0d52c69d6c7823365cc8004c61ab63 348 SUPERFAMILY SSF56042 172 343 1.32E-58 T 01-11-2018 IPR036676 PurM-like, C-terminal domain superfamily CDA09_06230 7a0d52c69d6c7823365cc8004c61ab63 348 Hamap MF_00741 Phosphoribosylformylglycinamidine cyclo-ligase [purM]. 8 347 46.929 T 01-11-2018 IPR004733 Phosphoribosylformylglycinamidine cyclo-ligase GO:0004641|GO:0005737|GO:0006189 KEGG: 00230+6.3.3.1|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|Reactome: R-HSA-73817 CDA09_06230 7a0d52c69d6c7823365cc8004c61ab63 348 Pfam PF00586 AIR synthase related protein, N-terminal domain 66 165 6.9E-15 T 01-11-2018 IPR016188 PurM-like, N-terminal domain CDA09_09410 fdec2c0e935c32adce739a6016a602c7 388 SUPERFAMILY SSF56645 4 239 7.98E-65 T 01-11-2018 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain superfamily GO:0016627|GO:0055114 CDA09_09410 fdec2c0e935c32adce739a6016a602c7 388 Pfam PF02770 Acyl-CoA dehydrogenase, middle domain 122 201 6.3E-18 T 01-11-2018 IPR006091 Acyl-CoA oxidase/dehydrogenase, central domain GO:0016627|GO:0055114 CDA09_09410 fdec2c0e935c32adce739a6016a602c7 388 Pfam PF02771 Acyl-CoA dehydrogenase, N-terminal domain 6 118 5.4E-23 T 01-11-2018 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal GO:0016627|GO:0050660|GO:0055114 CDA09_09410 fdec2c0e935c32adce739a6016a602c7 388 SUPERFAMILY SSF47203 227 386 2.42E-23 T 01-11-2018 IPR036250 Acyl-CoA dehydrogenase-like, C-terminal GO:0016627|GO:0055114 CDA09_09410 fdec2c0e935c32adce739a6016a602c7 388 Gene3D G3DSA:2.40.110.10 121 230 5.0E-32 T 01-11-2018 CDA09_09410 fdec2c0e935c32adce739a6016a602c7 388 Gene3D G3DSA:1.10.540.10 2 117 4.6E-31 T 01-11-2018 IPR037069 Acyl-CoA dehydrogenase/oxidase, N-terminal domain superfamily GO:0016627|GO:0050660|GO:0055114 CDA09_09410 fdec2c0e935c32adce739a6016a602c7 388 Pfam PF00441 Acyl-CoA dehydrogenase, C-terminal domain 227 379 1.8E-27 T 01-11-2018 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal GO:0016627|GO:0055114 CDA09_09410 fdec2c0e935c32adce739a6016a602c7 388 Gene3D G3DSA:1.20.140.10 231 388 2.1E-34 T 01-11-2018 CDA09_07455 5ab0fd39e3c3d82b906fdf4976178175 406 Pfam PF02771 Acyl-CoA dehydrogenase, N-terminal domain 6 133 1.6E-17 T 01-11-2018 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal GO:0016627|GO:0050660|GO:0055114 CDA09_07455 5ab0fd39e3c3d82b906fdf4976178175 406 Pfam PF00441 Acyl-CoA dehydrogenase, C-terminal domain 251 393 1.4E-33 T 01-11-2018 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal GO:0016627|GO:0055114 CDA09_07455 5ab0fd39e3c3d82b906fdf4976178175 406 Gene3D G3DSA:1.10.540.10 1 135 2.5E-23 T 01-11-2018 IPR037069 Acyl-CoA dehydrogenase/oxidase, N-terminal domain superfamily GO:0016627|GO:0050660|GO:0055114 CDA09_07455 5ab0fd39e3c3d82b906fdf4976178175 406 Gene3D G3DSA:1.20.140.10 252 396 7.4E-39 T 01-11-2018 CDA09_07455 5ab0fd39e3c3d82b906fdf4976178175 406 SUPERFAMILY SSF56645 1 242 1.31E-52 T 01-11-2018 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain superfamily GO:0016627|GO:0055114 CDA09_07455 5ab0fd39e3c3d82b906fdf4976178175 406 Pfam PF02770 Acyl-CoA dehydrogenase, middle domain 137 229 1.0E-17 T 01-11-2018 IPR006091 Acyl-CoA oxidase/dehydrogenase, central domain GO:0016627|GO:0055114 CDA09_07455 5ab0fd39e3c3d82b906fdf4976178175 406 Gene3D G3DSA:2.40.110.10 136 251 8.0E-30 T 01-11-2018 CDA09_07455 5ab0fd39e3c3d82b906fdf4976178175 406 SUPERFAMILY SSF47203 242 395 6.93E-42 T 01-11-2018 IPR036250 Acyl-CoA dehydrogenase-like, C-terminal GO:0016627|GO:0055114 CDA09_04315 2ffdaa09bba4b5842c635dbb618ba040 252 SUPERFAMILY SSF51366 1 251 1.02E-85 T 01-11-2018 IPR011060 Ribulose-phosphate binding barrel GO:0003824 CDA09_04315 2ffdaa09bba4b5842c635dbb618ba040 252 Hamap MF_01013 Imidazole glycerol phosphate synthase subunit HisF [hisF]. 1 251 49.121 T 01-11-2018 IPR004651 Histidine biosynthesis, HisF GO:0000105|GO:0000107|GO:0005737 CDA09_04315 2ffdaa09bba4b5842c635dbb618ba040 252 TIGRFAM TIGR00735 hisF: imidazoleglycerol phosphate synthase, cyclase subunit 1 251 3.2E-116 T 01-11-2018 IPR004651 Histidine biosynthesis, HisF GO:0000105|GO:0000107|GO:0005737 CDA09_04315 2ffdaa09bba4b5842c635dbb618ba040 252 Gene3D G3DSA:3.20.20.70 1 252 2.7E-111 T 01-11-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 CDA09_04315 2ffdaa09bba4b5842c635dbb618ba040 252 Pfam PF00977 Histidine biosynthesis protein 5 234 3.7E-91 T 01-11-2018 IPR006062 Histidine biosynthesis GO:0000105 CDA09_19285 2f99c5b3ad8e423372f85d9380c1bc84 354 Gene3D G3DSA:1.10.287.470 85 157 2.1E-67 T 01-11-2018 CDA09_19285 2f99c5b3ad8e423372f85d9380c1bc84 354 Gene3D G3DSA:2.40.420.20 33 330 2.1E-67 T 01-11-2018 CDA09_19285 2f99c5b3ad8e423372f85d9380c1bc84 354 TIGRFAM TIGR01730 RND_mfp: efflux transporter, RND family, MFP subunit 26 336 1.2E-61 T 01-11-2018 IPR006143 RND efflux pump, membrane fusion protein GO:0005215|GO:0016020|GO:0055085 CDA09_19285 2f99c5b3ad8e423372f85d9380c1bc84 354 Gene3D G3DSA:2.40.50.100 51 191 2.1E-67 T 01-11-2018 CDA09_19285 2f99c5b3ad8e423372f85d9380c1bc84 354 Pfam PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion 47 265 2.6E-24 T 01-11-2018 IPR032317 RND efflux pump, membrane fusion protein, barrel-sandwich domain CDA09_19285 2f99c5b3ad8e423372f85d9380c1bc84 354 Gene3D G3DSA:2.40.30.170 37 271 2.1E-67 T 01-11-2018 CDA09_19285 2f99c5b3ad8e423372f85d9380c1bc84 354 SUPERFAMILY SSF111369 42 271 1.7E-31 T 01-11-2018 CDA09_17700 ea9f082306a8659a1995a9da6f47a88a 599 Pfam PF02938 GAD domain 309 408 9.1E-29 T 01-11-2018 IPR029351 GAD domain Reactome: R-HSA-379726 CDA09_17700 ea9f082306a8659a1995a9da6f47a88a 599 Pfam PF01336 OB-fold nucleic acid binding domain 18 102 1.7E-19 T 01-11-2018 IPR004365 OB-fold nucleic acid binding domain, AA-tRNA synthetase-type GO:0003676 CDA09_17700 ea9f082306a8659a1995a9da6f47a88a 599 Pfam PF00152 tRNA synthetases class II (D, K and N) 119 561 1.5E-108 T 01-11-2018 IPR004364 Aminoacyl-tRNA synthetase, class II (D/K/N) GO:0000166|GO:0004812|GO:0005524|GO:0006418 CDA09_17700 ea9f082306a8659a1995a9da6f47a88a 599 SUPERFAMILY SSF55261 292 420 2.45E-40 T 01-11-2018 IPR004115 GAD-like domain superfamily GO:0004812|GO:0005524|GO:0005737 Reactome: R-HSA-379726 CDA09_17700 ea9f082306a8659a1995a9da6f47a88a 599 TIGRFAM TIGR00459 aspS_bact: aspartate--tRNA ligase 1 586 8.3E-251 T 01-11-2018 IPR004524 Aspartate-tRNA ligase, type 1 GO:0005524|GO:0016874 Reactome: R-HSA-379726 CDA09_17700 ea9f082306a8659a1995a9da6f47a88a 599 Gene3D G3DSA:2.40.50.140 1 105 1.6E-35 T 01-11-2018 CDA09_17700 ea9f082306a8659a1995a9da6f47a88a 599 SUPERFAMILY SSF50249 1 105 2.67E-33 T 01-11-2018 IPR012340 Nucleic acid-binding, OB-fold CDA09_17700 ea9f082306a8659a1995a9da6f47a88a 599 PRINTS PR01042 Aspartyl-tRNA synthetase signature 477 493 2.0E-26 T 01-11-2018 IPR002312 Aspartyl/Asparaginyl-tRNA synthetase, class IIb GO:0000166|GO:0004812|GO:0005524|GO:0006418 CDA09_17700 ea9f082306a8659a1995a9da6f47a88a 599 PRINTS PR01042 Aspartyl-tRNA synthetase signature 191 203 2.0E-26 T 01-11-2018 IPR002312 Aspartyl/Asparaginyl-tRNA synthetase, class IIb GO:0000166|GO:0004812|GO:0005524|GO:0006418 CDA09_17700 ea9f082306a8659a1995a9da6f47a88a 599 PRINTS PR01042 Aspartyl-tRNA synthetase signature 208 221 2.0E-26 T 01-11-2018 IPR002312 Aspartyl/Asparaginyl-tRNA synthetase, class IIb GO:0000166|GO:0004812|GO:0005524|GO:0006418 CDA09_17700 ea9f082306a8659a1995a9da6f47a88a 599 PRINTS PR01042 Aspartyl-tRNA synthetase signature 521 535 2.0E-26 T 01-11-2018 IPR002312 Aspartyl/Asparaginyl-tRNA synthetase, class IIb GO:0000166|GO:0004812|GO:0005524|GO:0006418 CDA09_17700 ea9f082306a8659a1995a9da6f47a88a 599 Gene3D G3DSA:3.30.930.10 118 585 2.6E-193 T 01-11-2018 CDA09_17700 ea9f082306a8659a1995a9da6f47a88a 599 Hamap MF_00044 Aspartate--tRNA(Asp/Asn) ligase [aspS]. 1 587 33.775 T 01-11-2018 IPR004524 Aspartate-tRNA ligase, type 1 GO:0005524|GO:0016874 Reactome: R-HSA-379726 CDA09_17700 ea9f082306a8659a1995a9da6f47a88a 599 SUPERFAMILY SSF55681 110 588 1.56E-108 T 01-11-2018 CDA09_17700 ea9f082306a8659a1995a9da6f47a88a 599 Gene3D G3DSA:3.30.1360.30 273 422 2.6E-193 T 01-11-2018 IPR004115 GAD-like domain superfamily GO:0004812|GO:0005524|GO:0005737 Reactome: R-HSA-379726 CDA09_21615 da6360edba3d80898376cfc6b35a91dc 105 SMART SM00966 8 53 5.5E-10 T 01-11-2018 IPR007159 SpoVT-AbrB domain GO:0003677 CDA09_21615 da6360edba3d80898376cfc6b35a91dc 105 Pfam PF15937 prlF antitoxin for toxin YhaV_toxin 8 101 9.2E-17 T 01-11-2018 IPR031848 PrlF antitoxin GO:0001558|GO:0003700|GO:0097351 CDA09_21615 da6360edba3d80898376cfc6b35a91dc 105 TIGRFAM TIGR01439 lp_hng_hel_AbrB: transcriptional regulator, AbrB family 9 48 7.2E-11 T 01-11-2018 IPR007159 SpoVT-AbrB domain GO:0003677 CDA09_21615 da6360edba3d80898376cfc6b35a91dc 105 Gene3D G3DSA:2.10.260.10 3 46 1.1E-12 T 01-11-2018 CDA09_21615 da6360edba3d80898376cfc6b35a91dc 105 SUPERFAMILY SSF89447 3 49 1.05E-10 T 01-11-2018 IPR037914 SpoVT-AbrB domain superfamily CDA09_21615 da6360edba3d80898376cfc6b35a91dc 105 ProDom PD030562 SUPPRESSOR HTRA PROTEASE TRANSCRIPTIONAL REGULATOR HTAR SOHA ABRB YDCA BLL1688 8 81 3.0E-7 T 01-11-2018 CDA09_21975 2ccec3ba1888570b774a0ee1ea808cc9 410 Gene3D G3DSA:3.30.1540.10 228 333 2.1E-89 T 01-11-2018 CDA09_21975 2ccec3ba1888570b774a0ee1ea808cc9 410 Pfam PF02515 CoA-transferase family III 8 382 4.9E-75 T 01-11-2018 IPR003673 CoA-transferase family III GO:0003824 CDA09_21975 2ccec3ba1888570b774a0ee1ea808cc9 410 SUPERFAMILY SSF89796 6 405 1.44E-88 T 01-11-2018 IPR023606 CoA-transferase family III domain superfamily CDA09_21975 2ccec3ba1888570b774a0ee1ea808cc9 410 Gene3D G3DSA:3.40.50.10540 8 399 2.1E-89 T 01-11-2018 IPR023606 CoA-transferase family III domain superfamily CDA09_10105 f9b297a032427823ee2645da3ba43bcc 393 Pfam PF02770 Acyl-CoA dehydrogenase, middle domain 126 219 4.9E-22 T 01-11-2018 IPR006091 Acyl-CoA oxidase/dehydrogenase, central domain GO:0016627|GO:0055114 CDA09_10105 f9b297a032427823ee2645da3ba43bcc 393 SUPERFAMILY SSF47203 231 391 4.99E-22 T 01-11-2018 IPR036250 Acyl-CoA dehydrogenase-like, C-terminal GO:0016627|GO:0055114 CDA09_10105 f9b297a032427823ee2645da3ba43bcc 393 Gene3D G3DSA:1.20.140.10 236 392 1.0E-35 T 01-11-2018 CDA09_10105 f9b297a032427823ee2645da3ba43bcc 393 Gene3D G3DSA:1.10.540.10 1 120 1.9E-23 T 01-11-2018 IPR037069 Acyl-CoA dehydrogenase/oxidase, N-terminal domain superfamily GO:0016627|GO:0050660|GO:0055114 CDA09_10105 f9b297a032427823ee2645da3ba43bcc 393 Pfam PF00441 Acyl-CoA dehydrogenase, C-terminal domain 231 386 4.4E-26 T 01-11-2018 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal GO:0016627|GO:0055114 CDA09_10105 f9b297a032427823ee2645da3ba43bcc 393 Gene3D G3DSA:2.40.110.10 126 235 2.0E-37 T 01-11-2018 CDA09_10105 f9b297a032427823ee2645da3ba43bcc 393 SUPERFAMILY SSF56645 1 242 5.5E-65 T 01-11-2018 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain superfamily GO:0016627|GO:0055114 CDA09_10105 f9b297a032427823ee2645da3ba43bcc 393 Pfam PF02771 Acyl-CoA dehydrogenase, N-terminal domain 6 120 3.2E-19 T 01-11-2018 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal GO:0016627|GO:0050660|GO:0055114 CDA09_17990 3278de1014f64c138279771c704f8042 786 Gene3D G3DSA:3.40.50.300 483 786 6.3E-96 T 01-11-2018 CDA09_17990 3278de1014f64c138279771c704f8042 786 Pfam PF00437 Type II/IV secretion system protein 380 648 3.8E-69 T 01-11-2018 IPR001482 Type II/IV secretion system protein CDA09_17990 3278de1014f64c138279771c704f8042 786 SMART SM00065 38 198 4.1E-10 T 01-11-2018 IPR003018 GAF domain GO:0005515 CDA09_17990 3278de1014f64c138279771c704f8042 786 Pfam PF05157 Type II secretion system (T2SS), protein E, N-terminal domain 233 338 1.1E-8 T 01-11-2018 IPR007831 General secretory system II, protein E, N-terminal CDA09_17990 3278de1014f64c138279771c704f8042 786 Pfam PF01590 GAF domain 38 186 1.9E-8 T 01-11-2018 IPR003018 GAF domain GO:0005515 CDA09_17990 3278de1014f64c138279771c704f8042 786 Gene3D G3DSA:3.30.450.90 343 482 9.1E-38 T 01-11-2018 CDA09_17990 3278de1014f64c138279771c704f8042 786 SUPERFAMILY SSF52540 370 783 1.97E-81 T 01-11-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CDA09_17990 3278de1014f64c138279771c704f8042 786 SUPERFAMILY SSF55781 23 189 1.2E-24 T 01-11-2018 CDA09_17990 3278de1014f64c138279771c704f8042 786 ProSitePatterns PS00662 Bacterial type II secretion system protein E signature. 576 590 - T 01-11-2018 IPR001482 Type II/IV secretion system protein CDA09_17990 3278de1014f64c138279771c704f8042 786 Gene3D G3DSA:3.30.450.40 15 194 5.4E-26 T 01-11-2018 IPR029016 GAF-like domain superfamily CDA09_17990 3278de1014f64c138279771c704f8042 786 SUPERFAMILY SSF160246 202 336 1.78E-10 T 01-11-2018 IPR037257 General secretory system II, protein E, N-terminal superfamily CDA09_20890 07ca5195b7f41f55ff08673d0da15d65 416 Gene3D G3DSA:1.10.3090.10 122 370 2.7E-37 T 01-11-2018 CDA09_20890 07ca5195b7f41f55ff08673d0da15d65 416 Pfam PF01966 HD domain 227 308 2.2E-7 T 01-11-2018 IPR006674 HD domain CDA09_20890 07ca5195b7f41f55ff08673d0da15d65 416 PIRSF PIRSF000813 1 404 2.4E-184 T 01-11-2018 IPR012006 tRNA nucleotidyltransferase, proteobacteria GO:0001680|GO:0003723|GO:0004810|GO:0005524 CDA09_20890 07ca5195b7f41f55ff08673d0da15d65 416 Gene3D G3DSA:3.30.460.10 1 121 2.0E-28 T 01-11-2018 CDA09_20890 07ca5195b7f41f55ff08673d0da15d65 416 Pfam PF12627 Probable RNA and SrmB- binding site of polymerase A 147 209 9.2E-11 T 01-11-2018 IPR032828 tRNA nucleotidyltransferase/poly(A) polymerase, RNA and SrmB- binding domain Reactome: R-HSA-6784531|Reactome: R-HSA-6785470 CDA09_20890 07ca5195b7f41f55ff08673d0da15d65 416 SUPERFAMILY SSF81891 121 352 6.02E-51 T 01-11-2018 CDA09_20890 07ca5195b7f41f55ff08673d0da15d65 416 Hamap MF_01262 CCA-adding enzyme [cca]. 1 399 40.574 T 01-11-2018 IPR012006 tRNA nucleotidyltransferase, proteobacteria GO:0001680|GO:0003723|GO:0004810|GO:0005524 CDA09_20890 07ca5195b7f41f55ff08673d0da15d65 416 SMART SM00471 222 336 0.0043 T 01-11-2018 IPR003607 HD/PDEase domain CDA09_20890 07ca5195b7f41f55ff08673d0da15d65 416 Pfam PF01743 Poly A polymerase head domain 3 121 1.2E-17 T 01-11-2018 IPR002646 Poly A polymerase, head domain GO:0003723|GO:0006396|GO:0016779 Reactome: R-HSA-6784531|Reactome: R-HSA-6785470 CDA09_20890 07ca5195b7f41f55ff08673d0da15d65 416 Hamap MF_01261 Multifunctional CCA protein [cca]. 1 405 51.603 T 01-11-2018 IPR012006 tRNA nucleotidyltransferase, proteobacteria GO:0001680|GO:0003723|GO:0004810|GO:0005524 CDA09_20890 07ca5195b7f41f55ff08673d0da15d65 416 SUPERFAMILY SSF81301 1 119 1.53E-31 T 01-11-2018 CDA09_20305 4f023a3586d0abb1bfa20250ea3bc203 487 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 144 468 2.5E-25 T 01-11-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 CDA09_20305 4f023a3586d0abb1bfa20250ea3bc203 487 Pfam PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster 23 131 2.6E-25 T 01-11-2018 IPR028261 Dihydroprymidine dehydrogenase domain II Reactome: R-HSA-73621 CDA09_20305 4f023a3586d0abb1bfa20250ea3bc203 487 Gene3D G3DSA:1.10.1060.10 9 141 9.7E-24 T 01-11-2018 IPR009051 Alpha-helical ferredoxin GO:0051536 CDA09_20305 4f023a3586d0abb1bfa20250ea3bc203 487 PRINTS PR00419 Adrenodoxin reductase family signature 145 167 1.1E-20 T 01-11-2018 CDA09_20305 4f023a3586d0abb1bfa20250ea3bc203 487 PRINTS PR00419 Adrenodoxin reductase family signature 168 181 1.1E-20 T 01-11-2018 CDA09_20305 4f023a3586d0abb1bfa20250ea3bc203 487 PRINTS PR00419 Adrenodoxin reductase family signature 296 310 1.1E-20 T 01-11-2018 CDA09_20305 4f023a3586d0abb1bfa20250ea3bc203 487 SUPERFAMILY SSF46548 2 154 3.14E-40 T 01-11-2018 IPR009051 Alpha-helical ferredoxin GO:0051536 CDA09_20305 4f023a3586d0abb1bfa20250ea3bc203 487 SUPERFAMILY SSF51971 142 410 7.77E-69 T 01-11-2018 CDA09_20305 4f023a3586d0abb1bfa20250ea3bc203 487 TIGRFAM TIGR01317 GOGAT_sm_gam: glutamate synthase, NADH/NADPH, small subunit 3 486 6.3E-220 T 01-11-2018 IPR006005 Glutamate synthase, NADH/NADPH, small subunit 1 GO:0006537|GO:0016639|GO:0055114 CDA09_20305 4f023a3586d0abb1bfa20250ea3bc203 487 Gene3D G3DSA:3.50.50.60 142 258 2.9E-15 T 01-11-2018 IPR036188 FAD/NAD(P)-binding domain superfamily CDA09_20305 4f023a3586d0abb1bfa20250ea3bc203 487 Gene3D G3DSA:3.50.50.60 259 409 6.5E-37 T 01-11-2018 IPR036188 FAD/NAD(P)-binding domain superfamily CDA09_20305 4f023a3586d0abb1bfa20250ea3bc203 487 SUPERFAMILY SSF51971 382 485 1.65E-9 T 01-11-2018 CDA09_10345 92f59a971aa24abf7368a6d7b3a9d062 63 TIGRFAM TIGR00013 taut: 4-oxalocrotonate tautomerase family enzyme 1 61 4.6E-23 T 01-11-2018 IPR018191 4-oxalocrotonate tautomerase, Pseudomonas-type GO:0006725|GO:0016853 CDA09_10345 92f59a971aa24abf7368a6d7b3a9d062 63 Pfam PF01361 Tautomerase enzyme 2 59 4.2E-23 T 01-11-2018 IPR004370 4-oxalocrotonate tautomerase GO:0006725|GO:0016853 CDA09_10345 92f59a971aa24abf7368a6d7b3a9d062 63 SUPERFAMILY SSF55331 2 61 1.96E-20 T 01-11-2018 IPR014347 Tautomerase/MIF superfamily CDA09_10345 92f59a971aa24abf7368a6d7b3a9d062 63 Gene3D G3DSA:3.30.429.10 1 63 1.1E-25 T 01-11-2018 IPR014347 Tautomerase/MIF superfamily CDA09_03730 ac0905cfcfb0d083bb5dd99ff58d1998 335 Pfam PF06144 DNA polymerase III, delta subunit 20 188 3.1E-15 T 01-11-2018 IPR010372 DNA polymerase III delta, N-terminal GO:0003677|GO:0003887|GO:0006260|GO:0009360 CDA09_03730 ac0905cfcfb0d083bb5dd99ff58d1998 335 SUPERFAMILY SSF52540 2 209 7.96E-42 T 01-11-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CDA09_03730 ac0905cfcfb0d083bb5dd99ff58d1998 335 Gene3D G3DSA:3.40.50.300 1 137 1.9E-43 T 01-11-2018 CDA09_03730 ac0905cfcfb0d083bb5dd99ff58d1998 335 SUPERFAMILY SSF48019 211 332 5.78E-25 T 01-11-2018 IPR008921 DNA polymerase III, clamp loader complex, gamma/delta/delta subunit, C-terminal GO:0003677|GO:0006260 Reactome: R-HSA-110312|Reactome: R-HSA-110314|Reactome: R-HSA-110320|Reactome: R-HSA-174411|Reactome: R-HSA-5651801|Reactome: R-HSA-5655862|Reactome: R-HSA-5656121|Reactome: R-HSA-5656169|Reactome: R-HSA-5685942|Reactome: R-HSA-5696397|Reactome: R-HSA-5696400|Reactome: R-HSA-6782135|Reactome: R-HSA-6782210|Reactome: R-HSA-69091 CDA09_03730 ac0905cfcfb0d083bb5dd99ff58d1998 335 Pfam PF14840 Processivity clamp loader gamma complex DNA pol III C-term 218 330 7.7E-8 T 01-11-2018 IPR032780 DNA polymerase III subunit delta, C-terminal KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 CDA09_03730 ac0905cfcfb0d083bb5dd99ff58d1998 335 Gene3D G3DSA:1.10.8.60 142 211 1.9E-25 T 01-11-2018 CDA09_03730 ac0905cfcfb0d083bb5dd99ff58d1998 335 Gene3D G3DSA:1.20.272.10 215 335 1.8E-29 T 01-11-2018 CDA09_03730 ac0905cfcfb0d083bb5dd99ff58d1998 335 TIGRFAM TIGR01128 holA: DNA polymerase III, delta subunit 16 332 3.1E-79 T 01-11-2018 IPR005790 DNA polymerase III, delta subunit GO:0003677|GO:0006260 CDA09_00550 8c583a25b693646db932bb4ba8ac756c 486 Hamap MF_00121 Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit B [gatB]. 5 484 37.128 T 01-11-2018 IPR004413 Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase, B subunit GO:0016884 CDA09_00550 8c583a25b693646db932bb4ba8ac756c 486 Pfam PF02934 GatB/GatE catalytic domain 8 292 1.5E-108 T 01-11-2018 IPR006075 Aspartyl/Glutamyl-tRNA(Gln) amidotransferase, subunit B/E, catalytic GO:0016874 CDA09_00550 8c583a25b693646db932bb4ba8ac756c 486 Pfam PF02637 GatB domain 334 483 5.4E-51 T 01-11-2018 IPR018027 Asn/Gln amidotransferase GO:0016884 CDA09_00550 8c583a25b693646db932bb4ba8ac756c 486 SUPERFAMILY SSF55931 7 301 1.7E-115 T 01-11-2018 IPR014746 Glutamine synthetase/guanido kinase, catalytic domain GO:0003824 CDA09_00550 8c583a25b693646db932bb4ba8ac756c 486 TIGRFAM TIGR00133 gatB: aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase, B subunit 5 483 2.6E-160 T 01-11-2018 IPR004413 Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase, B subunit GO:0016884 CDA09_00550 8c583a25b693646db932bb4ba8ac756c 486 ProSitePatterns PS01234 Glutamyl-tRNA(Gln) amidotransferase subunit B signature. 150 164 - T 01-11-2018 IPR017958 Glutamyl-tRNA(Gln) amidotransferase, subunit B, conserved site GO:0016884 CDA09_00550 8c583a25b693646db932bb4ba8ac756c 486 SMART SM00845 333 483 1.7E-79 T 01-11-2018 IPR018027 Asn/Gln amidotransferase GO:0016884 CDA09_00550 8c583a25b693646db932bb4ba8ac756c 486 Gene3D G3DSA:1.10.10.410 423 485 2.8E-26 T 01-11-2018 IPR023168 Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit B, C-terminal CDA09_00550 8c583a25b693646db932bb4ba8ac756c 486 Gene3D G3DSA:1.10.150.380 306 420 2.2E-30 T 01-11-2018 CDA09_00550 8c583a25b693646db932bb4ba8ac756c 486 SUPERFAMILY SSF89095 302 408 1.11E-31 T 01-11-2018 IPR003789 Aspartyl/glutamyl-tRNA amidotransferase subunit B-like GO:0016884 CDA09_18375 733672327d35ed936185b2a15bdb15fa 357 Gene3D G3DSA:3.40.50.150 146 338 1.3E-37 T 01-11-2018 CDA09_18375 733672327d35ed936185b2a15bdb15fa 357 Pfam PF13489 Methyltransferase domain 140 294 3.3E-25 T 01-11-2018 CDA09_18375 733672327d35ed936185b2a15bdb15fa 357 SUPERFAMILY SSF53335 145 308 4.96E-41 T 01-11-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase CDA09_22045 b6e3ed7bf3b0ab949546c4a60b87d99b 718 Gene3D G3DSA:3.40.50.300 134 330 1.5E-8 T 01-11-2018 CDA09_22045 b6e3ed7bf3b0ab949546c4a60b87d99b 718 Gene3D G3DSA:3.40.50.300 420 659 1.1E-25 T 01-11-2018 CDA09_22045 b6e3ed7bf3b0ab949546c4a60b87d99b 718 TIGRFAM TIGR03754 conj_TOL_TraD: conjugative coupling factor TraD, PFGI-1 class 7 656 0.0 T 01-11-2018 IPR022503 Conjugative coupling factor TraG/TraD, PFGI-1 CDA09_22045 b6e3ed7bf3b0ab949546c4a60b87d99b 718 Pfam PF12696 TraM recognition site of TraD and TraG 508 635 1.8E-9 T 01-11-2018 IPR032689 TraD/TraG, TraM recognition site CDA09_22045 b6e3ed7bf3b0ab949546c4a60b87d99b 718 TIGRFAM TIGR03743 SXT_TraD: conjugative coupling factor TraD, SXT/TOL subfamily 7 656 5.8E-263 T 01-11-2018 IPR022458 Conjugative coupling factor TraG/TraD CDA09_22045 b6e3ed7bf3b0ab949546c4a60b87d99b 718 SUPERFAMILY SSF52540 151 658 1.94E-49 T 01-11-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CDA09_10845 cdfd7d8660fd8d3d74b89db6918dbc1c 224 SMART SM00448 1 112 5.4E-33 T 01-11-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 CDA09_10845 cdfd7d8660fd8d3d74b89db6918dbc1c 224 SMART SM00862 145 218 7.9E-16 T 01-11-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 CDA09_10845 cdfd7d8660fd8d3d74b89db6918dbc1c 224 Pfam PF00072 Response regulator receiver domain 3 112 1.6E-24 T 01-11-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 CDA09_10845 cdfd7d8660fd8d3d74b89db6918dbc1c 224 Gene3D G3DSA:3.40.50.2300 1 121 4.9E-38 T 01-11-2018 CDA09_10845 cdfd7d8660fd8d3d74b89db6918dbc1c 224 SUPERFAMILY SSF52172 1 179 9.25E-37 T 01-11-2018 IPR011006 CheY-like superfamily CDA09_10845 cdfd7d8660fd8d3d74b89db6918dbc1c 224 Pfam PF00486 Transcriptional regulatory protein, C terminal 145 218 1.2E-16 T 01-11-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 CDA09_10845 cdfd7d8660fd8d3d74b89db6918dbc1c 224 Gene3D G3DSA:1.10.10.10 122 223 2.9E-22 T 01-11-2018 IPR036388 Winged helix-like DNA-binding domain superfamily CDA09_13705 90e5f61e02e30db7247340e3de85f7a6 357 SUPERFAMILY SSF52402 8 152 3.01E-25 T 01-11-2018 CDA09_13705 90e5f61e02e30db7247340e3de85f7a6 357 Gene3D G3DSA:3.40.50.620 6 154 1.4E-24 T 01-11-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold CDA09_13705 90e5f61e02e30db7247340e3de85f7a6 357 PRINTS PR01438 Universal stress protein signature 114 126 3.5E-9 T 01-11-2018 IPR006015 Universal stress protein A CDA09_13705 90e5f61e02e30db7247340e3de85f7a6 357 PRINTS PR01438 Universal stress protein signature 132 154 3.5E-9 T 01-11-2018 IPR006015 Universal stress protein A CDA09_13705 90e5f61e02e30db7247340e3de85f7a6 357 PRINTS PR01438 Universal stress protein signature 9 27 3.5E-9 T 01-11-2018 IPR006015 Universal stress protein A CDA09_13705 90e5f61e02e30db7247340e3de85f7a6 357 Pfam PF00582 Universal stress protein family 8 152 3.0E-19 T 01-11-2018 IPR006016 UspA CDA09_13705 90e5f61e02e30db7247340e3de85f7a6 357 Pfam PF01814 Hemerythrin HHE cation binding domain 170 300 2.7E-13 T 01-11-2018 IPR012312 Haemerythrin-like Reactome: R-HSA-390471|Reactome: R-HSA-8951664|Reactome: R-HSA-917937|Reactome: R-HSA-983168 CDA09_13705 90e5f61e02e30db7247340e3de85f7a6 357 Gene3D G3DSA:1.20.120.520 155 319 1.9E-28 T 01-11-2018 CDA09_18080 1a0c6aba88fa068ccebff60455820a33 345 Gene3D G3DSA:2.40.10.240 64 161 1.6E-110 T 01-11-2018 CDA09_18080 1a0c6aba88fa068ccebff60455820a33 345 Gene3D G3DSA:3.40.1780.10 17 338 1.6E-110 T 01-11-2018 CDA09_18080 1a0c6aba88fa068ccebff60455820a33 345 Hamap MF_00113 S-adenosylmethionine:tRNA ribosyltransferase-isomerase [queA]. 1 339 45.515 T 01-11-2018 IPR003699 S-adenosylmethionine:tRNA ribosyltransferase-isomerase, QueA GO:0008616|GO:0016740|GO:0016853 MetaCyc: PWY-6700 CDA09_18080 1a0c6aba88fa068ccebff60455820a33 345 TIGRFAM TIGR00113 queA: S-adenosylmethionine:tRNA ribosyltransferase-isomerase 4 339 1.4E-125 T 01-11-2018 IPR003699 S-adenosylmethionine:tRNA ribosyltransferase-isomerase, QueA GO:0008616|GO:0016740|GO:0016853 MetaCyc: PWY-6700 CDA09_18080 1a0c6aba88fa068ccebff60455820a33 345 Pfam PF02547 Queuosine biosynthesis protein 5 338 3.5E-128 T 01-11-2018 IPR003699 S-adenosylmethionine:tRNA ribosyltransferase-isomerase, QueA GO:0008616|GO:0016740|GO:0016853 MetaCyc: PWY-6700 CDA09_18080 1a0c6aba88fa068ccebff60455820a33 345 SUPERFAMILY SSF111337 6 338 9.94E-131 T 01-11-2018 IPR036100 S-adenosylmethionine:tRNA ribosyltransferase-isomerase, QueA superfamily GO:0008616|GO:0016740|GO:0016853 MetaCyc: PWY-6700 CDA09_11930 282a7c2b25dd2a4ce9d53d2ae176b4ce 251 Gene3D G3DSA:3.40.50.150 6 238 7.3E-48 T 01-11-2018 CDA09_11930 282a7c2b25dd2a4ce9d53d2ae176b4ce 251 SUPERFAMILY SSF53335 5 223 2.46E-42 T 01-11-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase CDA09_11930 282a7c2b25dd2a4ce9d53d2ae176b4ce 251 Pfam PF01564 Spermine/spermidine synthase domain 41 163 6.9E-12 T 01-11-2018 CDA09_07310 cf8693d259c2ed0925b6c5f936f8ad26 1250 Pfam PF05359 Domain of Unknown Function (DUF748) 377 535 5.3E-18 T 01-11-2018 IPR008023 Protein of unknown function DUF748 CDA09_07310 cf8693d259c2ed0925b6c5f936f8ad26 1250 Pfam PF05359 Domain of Unknown Function (DUF748) 154 305 4.1E-21 T 01-11-2018 IPR008023 Protein of unknown function DUF748 CDA09_07310 cf8693d259c2ed0925b6c5f936f8ad26 1250 Pfam PF05359 Domain of Unknown Function (DUF748) 616 769 4.7E-32 T 01-11-2018 IPR008023 Protein of unknown function DUF748 CDA09_07310 cf8693d259c2ed0925b6c5f936f8ad26 1250 Pfam PF05359 Domain of Unknown Function (DUF748) 852 998 2.7E-38 T 01-11-2018 IPR008023 Protein of unknown function DUF748 CDA09_13270 8df4e2867e33aaeda0a7e2018abc9c13 560 SUPERFAMILY SSF161098 293 551 1.05E-36 T 01-11-2018 IPR035906 MetI-like superfamily CDA09_13270 8df4e2867e33aaeda0a7e2018abc9c13 560 SUPERFAMILY SSF161098 13 266 1.57E-40 T 01-11-2018 IPR035906 MetI-like superfamily CDA09_13270 8df4e2867e33aaeda0a7e2018abc9c13 560 Gene3D G3DSA:1.10.3720.10 17 278 2.8E-49 T 01-11-2018 IPR035906 MetI-like superfamily CDA09_13270 8df4e2867e33aaeda0a7e2018abc9c13 560 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 354 550 3.7E-8 T 01-11-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 CDA09_13270 8df4e2867e33aaeda0a7e2018abc9c13 560 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 78 263 5.0E-11 T 01-11-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 CDA09_13270 8df4e2867e33aaeda0a7e2018abc9c13 560 Gene3D G3DSA:1.10.3720.10 292 555 5.9E-32 T 01-11-2018 IPR035906 MetI-like superfamily CDA09_05730 d31e93ffa6ae88d590a05ab47268cf53 318 Pfam PF00072 Response regulator receiver domain 185 306 6.6E-14 T 01-11-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 CDA09_05730 d31e93ffa6ae88d590a05ab47268cf53 318 SMART SM00448 183 308 1.8E-14 T 01-11-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 CDA09_05730 d31e93ffa6ae88d590a05ab47268cf53 318 SMART SM00260 24 162 3.7E-31 T 01-11-2018 IPR002545 CheW-like domain GO:0006935|GO:0007165 CDA09_05730 d31e93ffa6ae88d590a05ab47268cf53 318 Pfam PF01584 CheW-like domain 28 163 3.0E-34 T 01-11-2018 IPR002545 CheW-like domain GO:0006935|GO:0007165 CDA09_05730 d31e93ffa6ae88d590a05ab47268cf53 318 PIRSF PIRSF002867 8 316 1.2E-92 T 01-11-2018 IPR024181 Chemotaxis response regulator CheV CDA09_05730 d31e93ffa6ae88d590a05ab47268cf53 318 Gene3D G3DSA:2.40.50.180 46 162 1.2E-28 T 01-11-2018 CDA09_05730 d31e93ffa6ae88d590a05ab47268cf53 318 SUPERFAMILY SSF52172 179 314 8.4E-24 T 01-11-2018 IPR011006 CheY-like superfamily CDA09_05730 d31e93ffa6ae88d590a05ab47268cf53 318 Gene3D G3DSA:3.40.50.2300 179 317 5.2E-24 T 01-11-2018 CDA09_05730 d31e93ffa6ae88d590a05ab47268cf53 318 SUPERFAMILY SSF50341 24 164 8.89E-31 T 01-11-2018 IPR036061 CheW-like domain superfamily GO:0006935|GO:0007165 CDA09_05730 d31e93ffa6ae88d590a05ab47268cf53 318 Gene3D G3DSA:2.30.30.40 31 156 1.2E-28 T 01-11-2018 CDA09_12695 f361a7aae9f9fd96df4bbfb97cb1f45c 417 Pfam PF07690 Major Facilitator Superfamily 9 339 4.1E-16 T 01-11-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 CDA09_12695 f361a7aae9f9fd96df4bbfb97cb1f45c 417 SUPERFAMILY SSF103473 5 401 3.79E-25 T 01-11-2018 IPR036259 MFS transporter superfamily CDA09_12695 f361a7aae9f9fd96df4bbfb97cb1f45c 417 Gene3D G3DSA:1.20.1250.20 4 400 2.6E-22 T 01-11-2018 CDA09_04295 1e24ef3f65903c3c25f6fa4fc2deb41d 356 Gene3D G3DSA:3.90.1150.10 20 343 1.6E-104 T 01-11-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 CDA09_04295 1e24ef3f65903c3c25f6fa4fc2deb41d 356 SUPERFAMILY SSF53383 5 355 1.07E-76 T 01-11-2018 IPR015424 Pyridoxal phosphate-dependent transferase CDA09_04295 1e24ef3f65903c3c25f6fa4fc2deb41d 356 Hamap MF_01023 Histidinol-phosphate aminotransferase [hisC]. 4 355 54.981 T 01-11-2018 IPR005861 Histidinol-phosphate aminotransferase family GO:0000105|GO:0004400 KEGG: 00340+2.6.1.9|KEGG: 00350+2.6.1.9|KEGG: 00360+2.6.1.9|KEGG: 00400+2.6.1.9|KEGG: 00401+2.6.1.9|KEGG: 00960+2.6.1.9 CDA09_04295 1e24ef3f65903c3c25f6fa4fc2deb41d 356 TIGRFAM TIGR01141 hisC: histidinol-phosphate transaminase 9 354 7.2E-88 T 01-11-2018 IPR005861 Histidinol-phosphate aminotransferase family GO:0000105|GO:0004400 KEGG: 00340+2.6.1.9|KEGG: 00350+2.6.1.9|KEGG: 00360+2.6.1.9|KEGG: 00400+2.6.1.9|KEGG: 00401+2.6.1.9|KEGG: 00960+2.6.1.9 CDA09_04295 1e24ef3f65903c3c25f6fa4fc2deb41d 356 Pfam PF00155 Aminotransferase class I and II 25 350 1.6E-55 T 01-11-2018 IPR004839 Aminotransferase, class I/classII GO:0009058|GO:0030170 CDA09_04295 1e24ef3f65903c3c25f6fa4fc2deb41d 356 Gene3D G3DSA:3.40.640.10 38 263 1.6E-104 T 01-11-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 CDA09_04295 1e24ef3f65903c3c25f6fa4fc2deb41d 356 ProSitePatterns PS00599 Aminotransferases class-II pyridoxal-phosphate attachment site. 211 220 - T 01-11-2018 IPR001917 Aminotransferase, class-II, pyridoxal-phosphate binding site GO:0016740 CDA09_13920 e5d4ff556d3f6c17b14c486230ceeb43 130 SUPERFAMILY SSF54593 4 125 8.39E-21 T 01-11-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase CDA09_13920 e5d4ff556d3f6c17b14c486230ceeb43 130 Pfam PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily 5 119 4.8E-6 T 01-11-2018 IPR004360 Glyoxalase/fosfomycin resistance/dioxygenase domain CDA09_13920 e5d4ff556d3f6c17b14c486230ceeb43 130 Gene3D G3DSA:3.10.180.10 1 125 1.2E-31 T 01-11-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase CDA09_15685 7cca0c786a2e620ddc780d5910901751 463 Pfam PF02321 Outer membrane efflux protein 60 250 1.2E-22 T 01-11-2018 IPR003423 Outer membrane efflux protein GO:0015562|GO:0055085 CDA09_15685 7cca0c786a2e620ddc780d5910901751 463 Pfam PF02321 Outer membrane efflux protein 278 459 7.9E-31 T 01-11-2018 IPR003423 Outer membrane efflux protein GO:0015562|GO:0055085 CDA09_15685 7cca0c786a2e620ddc780d5910901751 463 Gene3D G3DSA:1.20.1600.10 51 461 7.3E-142 T 01-11-2018 CDA09_15685 7cca0c786a2e620ddc780d5910901751 463 Gene3D G3DSA:2.20.200.10 97 350 7.3E-142 T 01-11-2018 CDA09_15685 7cca0c786a2e620ddc780d5910901751 463 TIGRFAM TIGR01845 outer_NodT: efflux transporter, outer membrane factor (OMF) lipoprotein, NodT family 11 461 3.6E-132 T 01-11-2018 IPR010131 RND efflux system, outer membrane lipoprotein, NodT GO:0016020|GO:0022857|GO:0055085 CDA09_15685 7cca0c786a2e620ddc780d5910901751 463 SUPERFAMILY SSF56954 2 463 1.29E-113 T 01-11-2018 CDA09_01475 da54b6581b0cf2d4f3d42d8b6b95b501 288 SUPERFAMILY SSF46626 158 275 1.58E-17 T 01-11-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 CDA09_01475 da54b6581b0cf2d4f3d42d8b6b95b501 288 SUPERFAMILY SSF46626 14 117 3.0E-15 T 01-11-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 CDA09_01475 da54b6581b0cf2d4f3d42d8b6b95b501 288 PRINTS PR00605 Class IC cytochrome C signature 200 211 3.2E-6 T 01-11-2018 IPR008168 Cytochrome c, class IC GO:0005506|GO:0009055 CDA09_01475 da54b6581b0cf2d4f3d42d8b6b95b501 288 PRINTS PR00605 Class IC cytochrome C signature 251 273 3.2E-6 T 01-11-2018 IPR008168 Cytochrome c, class IC GO:0005506|GO:0009055 CDA09_01475 da54b6581b0cf2d4f3d42d8b6b95b501 288 Pfam PF13442 Cytochrome C oxidase, cbb3-type, subunit III 190 273 5.6E-12 T 01-11-2018 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 Reactome: R-HSA-111457|Reactome: R-HSA-111458|Reactome: R-HSA-111459|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 CDA09_01475 da54b6581b0cf2d4f3d42d8b6b95b501 288 Pfam PF13442 Cytochrome C oxidase, cbb3-type, subunit III 41 115 6.0E-11 T 01-11-2018 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 Reactome: R-HSA-111457|Reactome: R-HSA-111458|Reactome: R-HSA-111459|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 CDA09_01475 da54b6581b0cf2d4f3d42d8b6b95b501 288 Gene3D G3DSA:1.10.760.10 31 125 4.5E-15 T 01-11-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 CDA09_01475 da54b6581b0cf2d4f3d42d8b6b95b501 288 Gene3D G3DSA:1.10.760.10 188 279 4.3E-20 T 01-11-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 CDA09_21055 508727e3e2fd74c278346a46a761a18c 113 Pfam PF03683 Uncharacterised protein family (UPF0175) 42 104 9.6E-12 T 01-11-2018 IPR005368 Uncharacterised protein family UPF0175 CDA09_21055 508727e3e2fd74c278346a46a761a18c 113 SUPERFAMILY SSF143120 1 43 9.68E-7 T 01-11-2018 IPR036165 YefM-like superfamily CDA09_21055 508727e3e2fd74c278346a46a761a18c 113 TIGRFAM TIGR01552 phd_fam: prevent-host-death family protein 4 43 4.8E-7 T 01-11-2018 CDA09_21055 508727e3e2fd74c278346a46a761a18c 113 Pfam PF02604 Antitoxin Phd_YefM, type II toxin-antitoxin system 1 43 5.6E-6 T 01-11-2018 IPR006442 Type II toxin-antitoxin system, antitoxin Phd/YefM CDA09_16885 979162144b7dc0f95a86673f00db383b 825 Gene3D G3DSA:3.40.50.1000 501 768 6.6E-72 T 01-11-2018 IPR023214 HAD superfamily CDA09_16885 979162144b7dc0f95a86673f00db383b 825 Gene3D G3DSA:2.70.150.20 313 426 2.1E-33 T 01-11-2018 CDA09_16885 979162144b7dc0f95a86673f00db383b 825 SUPERFAMILY SSF55008 100 175 7.72E-18 T 01-11-2018 IPR036163 Heavy metal-associated domain superfamily GO:0030001|GO:0046872 CDA09_16885 979162144b7dc0f95a86673f00db383b 825 Gene3D G3DSA:3.40.1110.10 531 647 6.6E-72 T 01-11-2018 IPR023299 P-type ATPase, cytoplasmic domain N GO:0000166 Reactome: R-HSA-936837 CDA09_16885 979162144b7dc0f95a86673f00db383b 825 Pfam PF00702 haloacid dehalogenase-like hydrolase 517 729 2.3E-36 T 01-11-2018 CDA09_16885 979162144b7dc0f95a86673f00db383b 825 Pfam PF00403 Heavy-metal-associated domain 109 167 3.9E-9 T 01-11-2018 IPR006121 Heavy metal-associated domain, HMA GO:0030001|GO:0046872 CDA09_16885 979162144b7dc0f95a86673f00db383b 825 SUPERFAMILY SSF81665 310 794 7.19E-15 T 01-11-2018 IPR023298 P-type ATPase, transmembrane domain superfamily Reactome: R-HSA-936837 CDA09_16885 979162144b7dc0f95a86673f00db383b 825 SUPERFAMILY SSF81653 337 422 6.67E-25 T 01-11-2018 IPR008250 P-type ATPase, A domain superfamily Reactome: R-HSA-936837 CDA09_16885 979162144b7dc0f95a86673f00db383b 825 Pfam PF00122 E1-E2 ATPase 337 499 2.7E-49 T 01-11-2018 CDA09_16885 979162144b7dc0f95a86673f00db383b 825 TIGRFAM TIGR01525 ATPase-IB_hvy: heavy metal translocating P-type ATPase 259 818 1.5E-162 T 01-11-2018 IPR027256 P-type ATPase, subfamily IB GO:0006812|GO:0016021|GO:0019829 Reactome: R-HSA-936837 CDA09_16885 979162144b7dc0f95a86673f00db383b 825 ProSitePatterns PS00154 E1-E2 ATPases phosphorylation site. 522 528 - T 01-11-2018 IPR018303 P-type ATPase, phosphorylation site Reactome: R-HSA-936837 CDA09_16885 979162144b7dc0f95a86673f00db383b 825 SUPERFAMILY SSF56784 519 816 5.67E-53 T 01-11-2018 IPR036412 HAD-like superfamily CDA09_16885 979162144b7dc0f95a86673f00db383b 825 Gene3D G3DSA:3.30.70.100 103 188 4.6E-14 T 01-11-2018 CDA09_16885 979162144b7dc0f95a86673f00db383b 825 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 640 651 1.9E-26 T 01-11-2018 CDA09_16885 979162144b7dc0f95a86673f00db383b 825 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 716 735 1.9E-26 T 01-11-2018 CDA09_16885 979162144b7dc0f95a86673f00db383b 825 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 662 672 1.9E-26 T 01-11-2018 CDA09_16885 979162144b7dc0f95a86673f00db383b 825 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 372 386 1.9E-26 T 01-11-2018 CDA09_16885 979162144b7dc0f95a86673f00db383b 825 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 739 751 1.9E-26 T 01-11-2018 CDA09_16885 979162144b7dc0f95a86673f00db383b 825 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 520 534 1.9E-26 T 01-11-2018 CDA09_16885 979162144b7dc0f95a86673f00db383b 825 TIGRFAM TIGR01511 ATPase-IB1_Cu: copper-translocating P-type ATPase 241 819 3.6E-151 T 01-11-2018 CDA09_16885 979162144b7dc0f95a86673f00db383b 825 Pfam PF12156 Putative metal-binding domain of cation transport ATPase 16 97 2.0E-25 T 01-11-2018 IPR021993 Putative metal-binding domain of cation transport ATPase CDA09_16885 979162144b7dc0f95a86673f00db383b 825 TIGRFAM TIGR01494 ATPase_P-type: HAD ATPase, P-type, family IC 295 797 4.0E-78 T 01-11-2018 IPR001757 P-type ATPase GO:0016021 Reactome: R-HSA-936837 CDA09_21655 1bd27b8583b2075e7640459b7511bfec 164 Pfam PF04002 RadC-like JAB domain 44 162 3.6E-40 T 01-11-2018 IPR025657 RadC-like JAB domain CDA09_21655 1bd27b8583b2075e7640459b7511bfec 164 TIGRFAM TIGR00608 radc: DNA repair protein RadC 27 164 3.5E-41 T 01-11-2018 IPR001405 Uncharacterised protein family UPF0758 CDA09_21655 1bd27b8583b2075e7640459b7511bfec 164 Gene3D G3DSA:3.40.140.10 42 164 2.5E-39 T 01-11-2018 CDA09_20365 328c5eb57ee5df4adc6be8b052bd7d02 56 Pfam PF13627 Prokaryotic lipoprotein-attachment site 6 28 1.6E-8 T 01-11-2018 IPR032831 Prokaryotic lipoprotein-attachment site CDA09_08815 458b278f74388d2874748064baa84d98 320 Pfam PF00753 Metallo-beta-lactamase superfamily 34 191 1.7E-10 T 01-11-2018 IPR001279 Metallo-beta-lactamase CDA09_08815 458b278f74388d2874748064baa84d98 320 SMART SM00849 34 223 1.6E-15 T 01-11-2018 IPR001279 Metallo-beta-lactamase CDA09_08815 458b278f74388d2874748064baa84d98 320 SUPERFAMILY SSF56281 16 311 1.82E-54 T 01-11-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like CDA09_08815 458b278f74388d2874748064baa84d98 320 Gene3D G3DSA:3.60.15.10 12 242 1.8E-44 T 01-11-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like CDA09_01750 92b5b6e29d93d43a08f744cdfa390b8a 304 SUPERFAMILY SSF103481 195 290 2.48E-8 T 01-11-2018 CDA09_01750 92b5b6e29d93d43a08f744cdfa390b8a 304 SUPERFAMILY SSF103481 44 139 1.26E-7 T 01-11-2018 CDA09_01750 92b5b6e29d93d43a08f744cdfa390b8a 304 Pfam PF00892 EamA-like transporter family 155 288 7.7E-15 T 01-11-2018 IPR000620 EamA domain GO:0016020|GO:0016021 CDA09_09745 4d962b9eed81fcdcd5be5581f0d08484 458 Pfam PF07044 Protein of unknown function (DUF1329) 89 453 1.2E-119 T 01-11-2018 IPR010752 Protein of unknown function DUF1329 CDA09_20000 f34d0e4799f25b428517ec56797dfd78 485 Pfam PF13400 Putative Flp pilus-assembly TadE/G-like 60 104 6.2E-16 T 01-11-2018 IPR028087 Putative Flp pilus-assembly TadG-like, N-terminal CDA09_16010 e8e7aa762d9de9e63be7f5127e71a11b 479 Pfam PF10415 Fumarase C C-terminus 415 467 3.3E-21 T 01-11-2018 IPR018951 Fumarase C, C-terminal GO:0006099|GO:0016829 KEGG: 00020+4.2.1.2|KEGG: 00620+4.2.1.2|KEGG: 00720+4.2.1.2|MetaCyc: PWY-5392|MetaCyc: PWY-561|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7254|MetaCyc: PWY-7384|Reactome: R-HSA-71403 CDA09_16010 e8e7aa762d9de9e63be7f5127e71a11b 479 SUPERFAMILY SSF48557 11 464 1.31E-152 T 01-11-2018 IPR008948 L-Aspartase-like GO:0003824 CDA09_16010 e8e7aa762d9de9e63be7f5127e71a11b 479 Gene3D G3DSA:1.20.200.10 147 414 1.3E-112 T 01-11-2018 CDA09_16010 e8e7aa762d9de9e63be7f5127e71a11b 479 Pfam PF00206 Lyase 19 349 7.3E-100 T 01-11-2018 IPR022761 Fumarate lyase, N-terminal CDA09_16010 e8e7aa762d9de9e63be7f5127e71a11b 479 TIGRFAM TIGR00839 aspA: aspartate ammonia-lyase 11 469 4.9E-218 T 01-11-2018 IPR004708 Aspartate ammonia-lyase GO:0006531|GO:0008797 KEGG: 00250+4.3.1.1 CDA09_16010 e8e7aa762d9de9e63be7f5127e71a11b 479 ProSitePatterns PS00163 Fumarate lyases signature. 324 333 - T 01-11-2018 IPR020557 Fumarate lyase, conserved site GO:0003824 CDA09_16010 e8e7aa762d9de9e63be7f5127e71a11b 479 PRINTS PR00149 Fumarate lyase superfamily signature 187 205 5.5E-29 T 01-11-2018 IPR000362 Fumarate lyase family CDA09_16010 e8e7aa762d9de9e63be7f5127e71a11b 479 PRINTS PR00149 Fumarate lyase superfamily signature 324 340 5.5E-29 T 01-11-2018 IPR000362 Fumarate lyase family CDA09_16010 e8e7aa762d9de9e63be7f5127e71a11b 479 PRINTS PR00149 Fumarate lyase superfamily signature 142 160 5.5E-29 T 01-11-2018 IPR000362 Fumarate lyase family CDA09_16010 e8e7aa762d9de9e63be7f5127e71a11b 479 PRINTS PR00149 Fumarate lyase superfamily signature 278 305 5.5E-29 T 01-11-2018 IPR000362 Fumarate lyase family CDA09_16010 e8e7aa762d9de9e63be7f5127e71a11b 479 Gene3D G3DSA:1.10.40.30 415 466 8.6E-21 T 01-11-2018 CDA09_16010 e8e7aa762d9de9e63be7f5127e71a11b 479 Gene3D G3DSA:1.10.275.10 8 146 2.3E-59 T 01-11-2018 IPR024083 Fumarase/histidase, N-terminal CDA09_13000 74edf018bdf57105ffc658429b1b09f8 196 Pfam PF01814 Hemerythrin HHE cation binding domain 8 138 2.9E-14 T 01-11-2018 IPR012312 Haemerythrin-like Reactome: R-HSA-390471|Reactome: R-HSA-8951664|Reactome: R-HSA-917937|Reactome: R-HSA-983168 CDA09_13000 74edf018bdf57105ffc658429b1b09f8 196 Gene3D G3DSA:1.20.120.520 3 155 2.3E-23 T 01-11-2018 CDA09_10150 c71d98213febf586973e268b08d46062 322 Gene3D G3DSA:3.40.1550.10 135 280 1.9E-12 T 01-11-2018 IPR028976 CheC-like superfamily CDA09_10150 c71d98213febf586973e268b08d46062 322 Pfam PF13690 Chemotaxis phosphatase CheX 173 274 6.5E-15 T 01-11-2018 IPR028051 Chemotaxis phosphatase CheX-like domain CDA09_15915 d172491211af9e3e518e4ef6534cf8dc 242 SUPERFAMILY SSF103642 219 239 6.38E-9 T 01-11-2018 CDA09_15915 d172491211af9e3e518e4ef6534cf8dc 242 TIGRFAM TIGR02292 ygfB_yecA: yecA family protein 22 174 2.9E-32 T 01-11-2018 IPR011978 Uncharacterised protein family UPF0149 CDA09_15915 d172491211af9e3e518e4ef6534cf8dc 242 Gene3D G3DSA:3.10.450.50 198 241 1.2E-10 T 01-11-2018 CDA09_15915 d172491211af9e3e518e4ef6534cf8dc 242 Pfam PF03695 Uncharacterised protein family (UPF0149) 23 196 4.9E-31 T 01-11-2018 IPR011978 Uncharacterised protein family UPF0149 CDA09_15915 d172491211af9e3e518e4ef6534cf8dc 242 SUPERFAMILY SSF101327 21 187 1.44E-22 T 01-11-2018 IPR036255 YgfB-like superfamily CDA09_15915 d172491211af9e3e518e4ef6534cf8dc 242 Pfam PF02810 SEC-C motif 221 238 5.1E-11 T 01-11-2018 IPR004027 SEC-C motif CDA09_02040 65eb4005ec3b33578d2ab0a55673f75d 769 Gene3D G3DSA:3.20.20.450 517 768 1.2E-105 T 01-11-2018 IPR035919 EAL domain superfamily CDA09_02040 65eb4005ec3b33578d2ab0a55673f75d 769 SUPERFAMILY SSF141868 520 766 9.02E-91 T 01-11-2018 IPR035919 EAL domain superfamily CDA09_02040 65eb4005ec3b33578d2ab0a55673f75d 769 Pfam PF00563 EAL domain 520 754 1.6E-72 T 01-11-2018 IPR001633 EAL domain CDA09_02040 65eb4005ec3b33578d2ab0a55673f75d 769 SUPERFAMILY SSF55073 343 504 1.26E-31 T 01-11-2018 IPR029787 Nucleotide cyclase CDA09_02040 65eb4005ec3b33578d2ab0a55673f75d 769 Pfam PF00990 Diguanylate cyclase, GGDEF domain 338 498 4.6E-30 T 01-11-2018 IPR000160 GGDEF domain CDA09_02040 65eb4005ec3b33578d2ab0a55673f75d 769 SMART SM00267 327 503 9.3E-40 T 01-11-2018 IPR000160 GGDEF domain CDA09_02040 65eb4005ec3b33578d2ab0a55673f75d 769 Gene3D G3DSA:3.30.70.270 332 516 4.6E-41 T 01-11-2018 CDA09_02040 65eb4005ec3b33578d2ab0a55673f75d 769 SMART SM00052 513 759 1.6E-127 T 01-11-2018 IPR001633 EAL domain CDA09_02040 65eb4005ec3b33578d2ab0a55673f75d 769 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 337 500 3.6E-21 T 01-11-2018 IPR000160 GGDEF domain CDA09_21435 2092e68868497dbf14329f01110ea1fb 315 SUPERFAMILY SSF51735 1 154 8.86E-27 T 01-11-2018 IPR036291 NAD(P)-binding domain superfamily CDA09_21435 2092e68868497dbf14329f01110ea1fb 315 Pfam PF09290 Prokaryotic acetaldehyde dehydrogenase, dimerisation 130 267 2.2E-65 T 01-11-2018 IPR015426 Acetaldehyde dehydrogenase, C-terminal GO:0008774|GO:0019439|GO:0055114 KEGG: 00360+1.2.1.10|KEGG: 00362+1.2.1.10|KEGG: 00620+1.2.1.10|KEGG: 00621+1.2.1.10|KEGG: 00622+1.2.1.10|KEGG: 00650+1.2.1.10|MetaCyc: PWY-5162|MetaCyc: PWY-5436|MetaCyc: PWY-5480|MetaCyc: PWY-6587|MetaCyc: PWY-7085|MetaCyc: PWY-7180 CDA09_21435 2092e68868497dbf14329f01110ea1fb 315 Pfam PF01118 Semialdehyde dehydrogenase, NAD binding domain 5 114 7.0E-10 T 01-11-2018 IPR000534 Semialdehyde dehydrogenase, NAD-binding GO:0016620|GO:0051287|GO:0055114 CDA09_21435 2092e68868497dbf14329f01110ea1fb 315 SMART SM00859 5 120 7.1E-5 T 01-11-2018 IPR000534 Semialdehyde dehydrogenase, NAD-binding GO:0016620|GO:0051287|GO:0055114 CDA09_21435 2092e68868497dbf14329f01110ea1fb 315 Gene3D G3DSA:3.40.50.720 7 285 2.5E-122 T 01-11-2018 CDA09_21435 2092e68868497dbf14329f01110ea1fb 315 PIRSF PIRSF015689 1 297 2.4E-132 T 01-11-2018 IPR003361 Acetaldehyde dehydrogenase GO:0008774|GO:0019439|GO:0055114 KEGG: 00360+1.2.1.10|KEGG: 00362+1.2.1.10|KEGG: 00620+1.2.1.10|KEGG: 00621+1.2.1.10|KEGG: 00622+1.2.1.10|KEGG: 00650+1.2.1.10|MetaCyc: PWY-5162|MetaCyc: PWY-5436|MetaCyc: PWY-5480|MetaCyc: PWY-6587|MetaCyc: PWY-7085|MetaCyc: PWY-7180 CDA09_21435 2092e68868497dbf14329f01110ea1fb 315 SUPERFAMILY SSF55347 130 267 3.33E-60 T 01-11-2018 CDA09_21435 2092e68868497dbf14329f01110ea1fb 315 Hamap MF_01657 Acetaldehyde dehydrogenase [mhpF]. 1 315 146.44 T 01-11-2018 IPR003361 Acetaldehyde dehydrogenase GO:0008774|GO:0019439|GO:0055114 KEGG: 00360+1.2.1.10|KEGG: 00362+1.2.1.10|KEGG: 00620+1.2.1.10|KEGG: 00621+1.2.1.10|KEGG: 00622+1.2.1.10|KEGG: 00650+1.2.1.10|MetaCyc: PWY-5162|MetaCyc: PWY-5436|MetaCyc: PWY-5480|MetaCyc: PWY-6587|MetaCyc: PWY-7085|MetaCyc: PWY-7180 CDA09_21435 2092e68868497dbf14329f01110ea1fb 315 Gene3D G3DSA:3.30.360.10 130 273 2.5E-122 T 01-11-2018 CDA09_21435 2092e68868497dbf14329f01110ea1fb 315 TIGRFAM TIGR03215 ac_ald_DH_ac: acetaldehyde dehydrogenase (acetylating) 3 292 5.1E-142 T 01-11-2018 IPR003361 Acetaldehyde dehydrogenase GO:0008774|GO:0019439|GO:0055114 KEGG: 00360+1.2.1.10|KEGG: 00362+1.2.1.10|KEGG: 00620+1.2.1.10|KEGG: 00621+1.2.1.10|KEGG: 00622+1.2.1.10|KEGG: 00650+1.2.1.10|MetaCyc: PWY-5162|MetaCyc: PWY-5436|MetaCyc: PWY-5480|MetaCyc: PWY-6587|MetaCyc: PWY-7085|MetaCyc: PWY-7180 CDA09_09775 ad7c9a44cd60975b9479add86494ff68 99 TIGRFAM TIGR02684 dnstrm_HI1420: probable addiction module antidote protein 6 94 1.2E-36 T 01-11-2018 IPR014057 Uncharacterized protein HI1420 CDA09_09775 ad7c9a44cd60975b9479add86494ff68 99 Gene3D G3DSA:1.10.260.40 30 95 1.6E-7 T 01-11-2018 CDA09_09775 ad7c9a44cd60975b9479add86494ff68 99 SUPERFAMILY SSF47413 33 92 1.31E-10 T 01-11-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 CDA09_09775 ad7c9a44cd60975b9479add86494ff68 99 Pfam PF01381 Helix-turn-helix 50 92 4.5E-6 T 01-11-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 CDA09_12405 2e4d6490bfad465869a22a9429017de3 232 Gene3D G3DSA:3.30.110.170 36 225 1.6E-11 T 01-11-2018 CDA09_12405 2e4d6490bfad465869a22a9429017de3 232 Pfam PF04402 Protein of unknown function (DUF541) 35 227 4.5E-19 T 01-11-2018 IPR007497 Protein of unknown function DUF541 CDA09_12405 2e4d6490bfad465869a22a9429017de3 232 Gene3D G3DSA:3.30.70.2970 45 147 1.6E-11 T 01-11-2018 CDA09_19065 2db8df3368efc230bc85a36c2ed00be2 448 SUPERFAMILY SSF56954 10 445 3.79E-64 T 01-11-2018 CDA09_19065 2db8df3368efc230bc85a36c2ed00be2 448 Pfam PF02321 Outer membrane efflux protein 269 445 2.8E-24 T 01-11-2018 IPR003423 Outer membrane efflux protein GO:0015562|GO:0055085 CDA09_19065 2db8df3368efc230bc85a36c2ed00be2 448 Pfam PF02321 Outer membrane efflux protein 62 243 8.7E-17 T 01-11-2018 IPR003423 Outer membrane efflux protein GO:0015562|GO:0055085 CDA09_19065 2db8df3368efc230bc85a36c2ed00be2 448 Gene3D G3DSA:1.20.1600.10 47 447 5.3E-60 T 01-11-2018 CDA09_08690 8ed218a257085749a8543c87964004af 479 Gene3D G3DSA:2.30.40.10 5 459 4.7E-180 T 01-11-2018 IPR011059 Metal-dependent hydrolase, composite domain superfamily GO:0016810 CDA09_08690 8ed218a257085749a8543c87964004af 479 SUPERFAMILY SSF51338 4 70 5.98E-14 T 01-11-2018 IPR011059 Metal-dependent hydrolase, composite domain superfamily GO:0016810 CDA09_08690 8ed218a257085749a8543c87964004af 479 Gene3D G3DSA:3.20.20.140 55 430 4.7E-180 T 01-11-2018 CDA09_08690 8ed218a257085749a8543c87964004af 479 SUPERFAMILY SSF51556 55 389 1.06E-106 T 01-11-2018 IPR032466 Metal-dependent hydrolase CDA09_08690 8ed218a257085749a8543c87964004af 479 SUPERFAMILY SSF51338 359 460 1.28E-36 T 01-11-2018 IPR011059 Metal-dependent hydrolase, composite domain superfamily GO:0016810 CDA09_08690 8ed218a257085749a8543c87964004af 479 Pfam PF01979 Amidohydrolase family 51 443 3.7E-30 T 01-11-2018 IPR006680 Amidohydrolase-related GO:0016787 CDA09_08690 8ed218a257085749a8543c87964004af 479 TIGRFAM TIGR02033 D-hydantoinase: dihydropyrimidinase 7 461 2.3E-171 T 01-11-2018 IPR011778 Hydantoinase/dihydropyrimidinase GO:0005737 Reactome: R-HSA-399956 CDA09_11875 b6a3658485a604ce089dccb675359308 293 Pfam PF04261 Dyp-type peroxidase family 40 281 5.1E-42 T 01-11-2018 IPR006314 Dyp-type peroxidase GO:0004601|GO:0020037|GO:0055114 CDA09_11875 b6a3658485a604ce089dccb675359308 293 TIGRFAM TIGR01413 Dyp_perox_fam: Dyp-type peroxidase family 5 282 7.3E-64 T 01-11-2018 IPR006314 Dyp-type peroxidase GO:0004601|GO:0020037|GO:0055114 CDA09_11875 b6a3658485a604ce089dccb675359308 293 SUPERFAMILY SSF54909 1 282 9.12E-77 T 01-11-2018 IPR011008 Dimeric alpha-beta barrel CDA09_02405 bd81eb9ca21efa0e5b394b71d69fb227 388 PIRSF PIRSF000497 1 387 9.7E-176 T 01-11-2018 IPR002133 S-adenosylmethionine synthetase GO:0004478|GO:0005524|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: R-HSA-156581 CDA09_02405 bd81eb9ca21efa0e5b394b71d69fb227 388 ProSitePatterns PS00377 S-adenosylmethionine synthase signature 2. 262 270 - T 01-11-2018 IPR022631 S-adenosylmethionine synthetase, conserved site GO:0004478|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: R-HSA-156581 CDA09_02405 bd81eb9ca21efa0e5b394b71d69fb227 388 SUPERFAMILY SSF55973 117 235 1.77E-52 T 01-11-2018 IPR022636 S-adenosylmethionine synthetase superfamily GO:0004478|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: R-HSA-156581 CDA09_02405 bd81eb9ca21efa0e5b394b71d69fb227 388 Pfam PF02773 S-adenosylmethionine synthetase, C-terminal domain 236 374 2.2E-70 T 01-11-2018 IPR022630 S-adenosylmethionine synthetase, C-terminal GO:0004478|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: R-HSA-156581 CDA09_02405 bd81eb9ca21efa0e5b394b71d69fb227 388 Pfam PF00438 S-adenosylmethionine synthetase, N-terminal domain 5 102 6.1E-41 T 01-11-2018 IPR022628 S-adenosylmethionine synthetase, N-terminal GO:0004478|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: R-HSA-156581 CDA09_02405 bd81eb9ca21efa0e5b394b71d69fb227 388 Gene3D G3DSA:3.30.300.10 103 378 9.1E-182 T 01-11-2018 CDA09_02405 bd81eb9ca21efa0e5b394b71d69fb227 388 SUPERFAMILY SSF55973 4 111 5.49E-45 T 01-11-2018 IPR022636 S-adenosylmethionine synthetase superfamily GO:0004478|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: R-HSA-156581 CDA09_02405 bd81eb9ca21efa0e5b394b71d69fb227 388 ProSitePatterns PS00376 S-adenosylmethionine synthase signature 1. 119 129 - T 01-11-2018 IPR022631 S-adenosylmethionine synthetase, conserved site GO:0004478|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: R-HSA-156581 CDA09_02405 bd81eb9ca21efa0e5b394b71d69fb227 388 TIGRFAM TIGR01034 metK: methionine adenosyltransferase 6 383 4.3E-185 T 01-11-2018 IPR002133 S-adenosylmethionine synthetase GO:0004478|GO:0005524|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: R-HSA-156581 CDA09_02405 bd81eb9ca21efa0e5b394b71d69fb227 388 Gene3D G3DSA:3.30.300.10 6 236 9.1E-182 T 01-11-2018 CDA09_02405 bd81eb9ca21efa0e5b394b71d69fb227 388 Pfam PF02772 S-adenosylmethionine synthetase, central domain 117 234 1.9E-47 T 01-11-2018 IPR022629 S-adenosylmethionine synthetase, central domain GO:0004478|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: R-HSA-156581 CDA09_02405 bd81eb9ca21efa0e5b394b71d69fb227 388 Gene3D G3DSA:3.30.300.10 12 273 9.1E-182 T 01-11-2018 CDA09_02405 bd81eb9ca21efa0e5b394b71d69fb227 388 SUPERFAMILY SSF55973 236 384 4.41E-70 T 01-11-2018 IPR022636 S-adenosylmethionine synthetase superfamily GO:0004478|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: R-HSA-156581 CDA09_02405 bd81eb9ca21efa0e5b394b71d69fb227 388 Hamap MF_00086 S-adenosylmethionine synthase [metK]. 3 386 57.562 T 01-11-2018 IPR002133 S-adenosylmethionine synthetase GO:0004478|GO:0005524|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: R-HSA-156581 CDA09_05050 eb2660e104b2213862e16eaabd293c0f 262 Pfam PF00398 Ribosomal RNA adenine dimethylase 4 224 3.3E-55 T 01-11-2018 IPR001737 Ribosomal RNA adenine methyltransferase KsgA/Erm CDA09_05050 eb2660e104b2213862e16eaabd293c0f 262 TIGRFAM TIGR00755 ksgA: ribosomal RNA small subunit methyltransferase A 5 253 2.0E-81 T 01-11-2018 IPR011530 Ribosomal RNA adenine dimethylase GO:0000179|GO:0006364 CDA09_05050 eb2660e104b2213862e16eaabd293c0f 262 SMART SM00650 20 188 5.0E-83 T 01-11-2018 IPR020598 Ribosomal RNA adenine methylase transferase, N-terminal GO:0000154|GO:0000179|GO:0008649 CDA09_05050 eb2660e104b2213862e16eaabd293c0f 262 SUPERFAMILY SSF53335 4 255 7.14E-75 T 01-11-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase CDA09_05050 eb2660e104b2213862e16eaabd293c0f 262 Hamap MF_00607 Ribosomal RNA small subunit methyltransferase A [rsmA]. 4 255 56.401 T 01-11-2018 IPR011530 Ribosomal RNA adenine dimethylase GO:0000179|GO:0006364 CDA09_05050 eb2660e104b2213862e16eaabd293c0f 262 Gene3D G3DSA:3.40.50.150 1 187 1.2E-64 T 01-11-2018 CDA09_05050 eb2660e104b2213862e16eaabd293c0f 262 ProSitePatterns PS01131 Ribosomal RNA adenine dimethylases signature. 36 63 - T 01-11-2018 IPR020596 Ribosomal RNA adenine methylase transferase, conserved site GO:0000154|GO:0000179|GO:0008649 CDA09_05050 eb2660e104b2213862e16eaabd293c0f 262 Gene3D G3DSA:1.10.8.100 193 260 4.3E-21 T 01-11-2018 IPR023165 rRNA adenine dimethylase-like Reactome: R-HSA-2151201|Reactome: R-HSA-6793080 CDA09_17630 ede777939340c2283047e24a46fd4171 324 TIGRFAM TIGR03373 VI_minor_4: type VI secretion-associated protein, BMA_A0400 family 7 132 3.7E-29 T 01-11-2018 IPR017748 T6S-associated protein TagF CDA09_17630 ede777939340c2283047e24a46fd4171 324 Pfam PF09867 Uncharacterized protein conserved in bacteria (DUF2094) 7 131 1.7E-23 T 01-11-2018 IPR017748 T6S-associated protein TagF CDA09_17630 ede777939340c2283047e24a46fd4171 324 Gene3D G3DSA:3.40.1730.10 4 186 1.3E-18 T 01-11-2018 IPR038225 T6S-associated protein TagF superfamily CDA09_01425 6aac3ff3c88632cbf7fb0433bccf747f 319 Gene3D G3DSA:2.120.10.30 39 134 1.2E-7 T 01-11-2018 IPR011042 Six-bladed beta-propeller, TolB-like CDA09_01425 6aac3ff3c88632cbf7fb0433bccf747f 319 Gene3D G3DSA:2.120.10.30 135 313 8.7E-41 T 01-11-2018 IPR011042 Six-bladed beta-propeller, TolB-like CDA09_01425 6aac3ff3c88632cbf7fb0433bccf747f 319 Pfam PF17170 6-bladed beta-propeller 244 309 6.5E-9 T 01-11-2018 CDA09_01425 6aac3ff3c88632cbf7fb0433bccf747f 319 Pfam PF17170 6-bladed beta-propeller 152 212 2.4E-8 T 01-11-2018 CDA09_01425 6aac3ff3c88632cbf7fb0433bccf747f 319 SUPERFAMILY SSF101898 48 312 2.62E-40 T 01-11-2018 CDA09_04940 0e16e79aa1b81bef7326d7267aee0a4d 285 Pfam PF05175 Methyltransferase small domain 105 194 1.1E-15 T 01-11-2018 IPR007848 Methyltransferase small domain GO:0008168 CDA09_04940 0e16e79aa1b81bef7326d7267aee0a4d 285 Gene3D G3DSA:1.10.8.10 11 87 2.0E-20 T 01-11-2018 CDA09_04940 0e16e79aa1b81bef7326d7267aee0a4d 285 Hamap MF_02126 Release factor glutamine methyltransferase [prmC]. 11 278 42.27 T 01-11-2018 IPR019874 Protein-(glutamine-N5) methyltransferase, release factor-specific GO:0008168 CDA09_04940 0e16e79aa1b81bef7326d7267aee0a4d 285 Gene3D G3DSA:3.40.50.150 88 278 5.0E-57 T 01-11-2018 CDA09_04940 0e16e79aa1b81bef7326d7267aee0a4d 285 ProSitePatterns PS00092 N-6 Adenine-specific DNA methylases signature. 183 189 - T 01-11-2018 IPR002052 DNA methylase, N-6 adenine-specific, conserved site GO:0003676|GO:0008168|GO:0032259 CDA09_04940 0e16e79aa1b81bef7326d7267aee0a4d 285 TIGRFAM TIGR00536 hemK_fam: methyltransferase, HemK family 7 278 5.4E-73 T 01-11-2018 IPR004556 Modification methylase HemK GO:0006479|GO:0008276 CDA09_04940 0e16e79aa1b81bef7326d7267aee0a4d 285 SUPERFAMILY SSF53335 19 275 1.21E-57 T 01-11-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase CDA09_04940 0e16e79aa1b81bef7326d7267aee0a4d 285 TIGRFAM TIGR03534 RF_mod_PrmC: protein-(glutamine-N5) methyltransferase, release factor-specific 26 274 6.1E-89 T 01-11-2018 IPR019874 Protein-(glutamine-N5) methyltransferase, release factor-specific GO:0008168 CDA09_07420 3b93e35f75b23398df83bb73bfa8efd1 144 Pfam PF12172 Rubredoxin-like zinc ribbon domain (DUF35_N) 31 63 1.5E-7 T 01-11-2018 IPR022002 Domain of unknown function DUF35, rubredoxin-like zinc ribbon domain, N-terminal CDA09_07420 3b93e35f75b23398df83bb73bfa8efd1 144 Pfam PF01796 DUF35 OB-fold domain, acyl-CoA-associated 65 123 2.5E-7 T 01-11-2018 IPR002878 Domain of unknown function DUF35, OB-fold, C-terminal CDA09_07420 3b93e35f75b23398df83bb73bfa8efd1 144 SUPERFAMILY SSF50249 33 129 3.26E-21 T 01-11-2018 IPR012340 Nucleic acid-binding, OB-fold CDA09_21740 ad04e3920bca7df56ad9ed9ff4382790 383 Pfam PF02770 Acyl-CoA dehydrogenase, middle domain 128 223 1.7E-21 T 01-11-2018 IPR006091 Acyl-CoA oxidase/dehydrogenase, central domain GO:0016627|GO:0055114 CDA09_21740 ad04e3920bca7df56ad9ed9ff4382790 383 Gene3D G3DSA:1.20.140.10 239 383 1.0E-9 T 01-11-2018 CDA09_21740 ad04e3920bca7df56ad9ed9ff4382790 383 Gene3D G3DSA:2.40.110.10 127 238 7.9E-32 T 01-11-2018 CDA09_21740 ad04e3920bca7df56ad9ed9ff4382790 383 SUPERFAMILY SSF56645 13 245 3.93E-62 T 01-11-2018 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain superfamily GO:0016627|GO:0055114 CDA09_21740 ad04e3920bca7df56ad9ed9ff4382790 383 Pfam PF02771 Acyl-CoA dehydrogenase, N-terminal domain 13 124 1.5E-22 T 01-11-2018 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal GO:0016627|GO:0050660|GO:0055114 CDA09_21740 ad04e3920bca7df56ad9ed9ff4382790 383 ProSitePatterns PS00072 Acyl-CoA dehydrogenases signature 1. 130 142 - T 01-11-2018 IPR006089 Acyl-CoA dehydrogenase, conserved site GO:0003995|GO:0055114 CDA09_21740 ad04e3920bca7df56ad9ed9ff4382790 383 Gene3D G3DSA:1.10.540.10 7 125 3.3E-25 T 01-11-2018 IPR037069 Acyl-CoA dehydrogenase/oxidase, N-terminal domain superfamily GO:0016627|GO:0050660|GO:0055114 CDA09_20640 b44ea9443c5af4f56861845018f5dc48 258 Gene3D G3DSA:3.30.479.30 50 181 9.7E-46 T 01-11-2018 CDA09_20640 b44ea9443c5af4f56861845018f5dc48 258 SUPERFAMILY SSF117892 53 186 1.96E-43 T 01-11-2018 IPR036013 Band 7/SPFH domain superfamily CDA09_20640 b44ea9443c5af4f56861845018f5dc48 258 SMART SM00244 22 179 3.1E-61 T 01-11-2018 IPR001107 Band 7 domain CDA09_20640 b44ea9443c5af4f56861845018f5dc48 258 Pfam PF01145 SPFH domain / Band 7 family 27 196 8.5E-35 T 01-11-2018 IPR001107 Band 7 domain CDA09_20640 b44ea9443c5af4f56861845018f5dc48 258 PRINTS PR00721 Stomatin signature 111 128 1.2E-60 T 01-11-2018 IPR001972 Stomatin family GO:0016020 CDA09_20640 b44ea9443c5af4f56861845018f5dc48 258 PRINTS PR00721 Stomatin signature 29 51 1.2E-60 T 01-11-2018 IPR001972 Stomatin family GO:0016020 CDA09_20640 b44ea9443c5af4f56861845018f5dc48 258 PRINTS PR00721 Stomatin signature 76 97 1.2E-60 T 01-11-2018 IPR001972 Stomatin family GO:0016020 CDA09_20640 b44ea9443c5af4f56861845018f5dc48 258 PRINTS PR00721 Stomatin signature 131 154 1.2E-60 T 01-11-2018 IPR001972 Stomatin family GO:0016020 CDA09_20640 b44ea9443c5af4f56861845018f5dc48 258 PRINTS PR00721 Stomatin signature 155 173 1.2E-60 T 01-11-2018 IPR001972 Stomatin family GO:0016020 CDA09_20640 b44ea9443c5af4f56861845018f5dc48 258 PRINTS PR00721 Stomatin signature 174 195 1.2E-60 T 01-11-2018 IPR001972 Stomatin family GO:0016020 CDA09_20640 b44ea9443c5af4f56861845018f5dc48 258 PRINTS PR00721 Stomatin signature 199 222 1.2E-60 T 01-11-2018 IPR001972 Stomatin family GO:0016020 CDA09_16865 2f870715836e31cee0ec52eeb03d6c1c 59 Pfam PF05545 Cbb3-type cytochrome oxidase component FixQ 7 45 5.1E-10 T 01-11-2018 IPR008621 Cbb3-type cytochrome oxidase component CDA09_00965 8d7b270462a52e9a732308290f9f03a2 1194 Pfam PF04257 Exodeoxyribonuclease V, gamma subunit 15 836 4.0E-279 T 01-11-2018 CDA09_00965 8d7b270462a52e9a732308290f9f03a2 1194 Gene3D G3DSA:1.10.486.10 480 693 2.1E-189 T 01-11-2018 CDA09_00965 8d7b270462a52e9a732308290f9f03a2 1194 Gene3D G3DSA:1.10.10.990 894 975 1.5E-6 T 01-11-2018 CDA09_00965 8d7b270462a52e9a732308290f9f03a2 1194 TIGRFAM TIGR01450 recC: exodeoxyribonuclease V, gamma subunit 15 1134 0.0 T 01-11-2018 IPR006697 RecBCD enzyme subunit RecC GO:0008854|GO:0009338 CDA09_00965 8d7b270462a52e9a732308290f9f03a2 1194 SUPERFAMILY SSF52980 851 1174 1.66E-52 T 01-11-2018 IPR011335 Restriction endonuclease type II-like Reactome: R-HSA-6783310 CDA09_00965 8d7b270462a52e9a732308290f9f03a2 1194 Gene3D G3DSA:1.10.10.160 98 213 1.3E-116 T 01-11-2018 IPR013986 DExx box DNA helicase domain superfamily CDA09_00965 8d7b270462a52e9a732308290f9f03a2 1194 Gene3D G3DSA:3.40.50.10930 17 331 1.3E-116 T 01-11-2018 CDA09_00965 8d7b270462a52e9a732308290f9f03a2 1194 SUPERFAMILY SSF52540 391 838 2.12E-92 T 01-11-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CDA09_00965 8d7b270462a52e9a732308290f9f03a2 1194 Hamap MF_01486 RecBCD enzyme subunit RecC [recC]. 14 1181 19.991 T 01-11-2018 IPR006697 RecBCD enzyme subunit RecC GO:0008854|GO:0009338 CDA09_00965 8d7b270462a52e9a732308290f9f03a2 1194 Gene3D G3DSA:3.40.50.300 364 837 2.1E-189 T 01-11-2018 CDA09_00965 8d7b270462a52e9a732308290f9f03a2 1194 PIRSF PIRSF000980 14 1186 0.0 T 01-11-2018 IPR006697 RecBCD enzyme subunit RecC GO:0008854|GO:0009338 CDA09_00965 8d7b270462a52e9a732308290f9f03a2 1194 SUPERFAMILY SSF52540 14 376 1.49E-102 T 01-11-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CDA09_10275 6aede5c1982b78c347cfe1551f24e2c0 350 SUPERFAMILY SSF63380 105 198 1.79E-24 T 01-11-2018 IPR017938 Riboflavin synthase-like beta-barrel CDA09_10275 6aede5c1982b78c347cfe1551f24e2c0 350 Gene3D G3DSA:3.40.50.80 197 338 4.6E-31 T 01-11-2018 IPR039261 Ferredoxin-NADP reductase (FNR), nucleotide-binding domain CDA09_10275 6aede5c1982b78c347cfe1551f24e2c0 350 Pfam PF00111 2Fe-2S iron-sulfur cluster binding domain 6 81 3.5E-16 T 01-11-2018 IPR001041 2Fe-2S ferredoxin-type iron-sulfur binding domain GO:0009055|GO:0051536 CDA09_10275 6aede5c1982b78c347cfe1551f24e2c0 350 SUPERFAMILY SSF52343 204 334 1.31E-35 T 01-11-2018 IPR039261 Ferredoxin-NADP reductase (FNR), nucleotide-binding domain CDA09_10275 6aede5c1982b78c347cfe1551f24e2c0 350 Pfam PF00970 Oxidoreductase FAD-binding domain 108 197 1.2E-9 T 01-11-2018 IPR008333 Flavoprotein pyridine nucleotide cytochrome reductase-like, FAD-binding domain Reactome: R-HSA-1237044 CDA09_10275 6aede5c1982b78c347cfe1551f24e2c0 350 Pfam PF00175 Oxidoreductase NAD-binding domain 209 313 1.4E-16 T 01-11-2018 IPR001433 Oxidoreductase FAD/NAD(P)-binding GO:0016491|GO:0055114 CDA09_10275 6aede5c1982b78c347cfe1551f24e2c0 350 Gene3D G3DSA:3.10.20.30 1 94 4.0E-24 T 01-11-2018 IPR012675 Beta-grasp domain superfamily CDA09_10275 6aede5c1982b78c347cfe1551f24e2c0 350 SUPERFAMILY SSF54292 3 89 4.98E-27 T 01-11-2018 IPR036010 2Fe-2S ferredoxin-like superfamily GO:0009055|GO:0051536 CDA09_10275 6aede5c1982b78c347cfe1551f24e2c0 350 PRINTS PR00410 Phenol hydroxylase reductase family signature 233 242 2.8E-28 T 01-11-2018 IPR001221 Phenol hydroxylase reductase GO:0055114 CDA09_10275 6aede5c1982b78c347cfe1551f24e2c0 350 PRINTS PR00410 Phenol hydroxylase reductase family signature 149 156 2.8E-28 T 01-11-2018 IPR001221 Phenol hydroxylase reductase GO:0055114 CDA09_10275 6aede5c1982b78c347cfe1551f24e2c0 350 PRINTS PR00410 Phenol hydroxylase reductase family signature 301 309 2.8E-28 T 01-11-2018 IPR001221 Phenol hydroxylase reductase GO:0055114 CDA09_10275 6aede5c1982b78c347cfe1551f24e2c0 350 PRINTS PR00410 Phenol hydroxylase reductase family signature 208 227 2.8E-28 T 01-11-2018 IPR001221 Phenol hydroxylase reductase GO:0055114 CDA09_10275 6aede5c1982b78c347cfe1551f24e2c0 350 PRINTS PR00410 Phenol hydroxylase reductase family signature 192 201 2.8E-28 T 01-11-2018 IPR001221 Phenol hydroxylase reductase GO:0055114 CDA09_10275 6aede5c1982b78c347cfe1551f24e2c0 350 PRINTS PR00410 Phenol hydroxylase reductase family signature 132 144 2.8E-28 T 01-11-2018 IPR001221 Phenol hydroxylase reductase GO:0055114 CDA09_10275 6aede5c1982b78c347cfe1551f24e2c0 350 Gene3D G3DSA:2.40.30.10 99 196 1.4E-24 T 01-11-2018 CDA09_13385 d53f49497a6272ad3f7c6128ee0cea07 163 Pfam PF03548 Outer membrane lipoprotein carrier protein LolA 9 156 7.4E-8 T 01-11-2018 IPR004564 Outer membrane lipoprotein carrier protein LolA-like CDA09_13385 d53f49497a6272ad3f7c6128ee0cea07 163 SUPERFAMILY SSF89392 2 158 5.89E-16 T 01-11-2018 IPR029046 Lipoprotein localisation LolA/LolB/LppX CDA09_13385 d53f49497a6272ad3f7c6128ee0cea07 163 Gene3D G3DSA:2.50.20.10 1 159 1.1E-20 T 01-11-2018 CDA09_20540 c97f187a4f59e90c87d5d2876cfa4f55 833 Pfam PF02771 Acyl-CoA dehydrogenase, N-terminal domain 143 235 1.1E-18 T 01-11-2018 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal GO:0016627|GO:0050660|GO:0055114 CDA09_20540 c97f187a4f59e90c87d5d2876cfa4f55 833 SUPERFAMILY SSF47203 363 510 5.48E-22 T 01-11-2018 IPR036250 Acyl-CoA dehydrogenase-like, C-terminal GO:0016627|GO:0055114 CDA09_20540 c97f187a4f59e90c87d5d2876cfa4f55 833 Gene3D G3DSA:1.20.140.10 363 510 3.5E-91 T 01-11-2018 CDA09_20540 c97f187a4f59e90c87d5d2876cfa4f55 833 SUPERFAMILY SSF56645 126 358 1.57E-41 T 01-11-2018 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain superfamily GO:0016627|GO:0055114 CDA09_20540 c97f187a4f59e90c87d5d2876cfa4f55 833 Pfam PF09317 Domain of unknown function (DUF1974) 517 808 5.9E-112 T 01-11-2018 IPR015396 Acyl-CoA dehydrogenase, C-termina, bacterial type GO:0003995|GO:0033539|GO:0055114 KEGG: 00071+1.3.8.8+1.3.8.7|KEGG: 00280+1.3.8.7|KEGG: 00410+1.3.8.7|KEGG: 00640+1.3.8.7|MetaCyc: PWY-7094|MetaCyc: PWY-7654 CDA09_20540 c97f187a4f59e90c87d5d2876cfa4f55 833 Gene3D G3DSA:1.10.540.10 126 238 3.5E-91 T 01-11-2018 IPR037069 Acyl-CoA dehydrogenase/oxidase, N-terminal domain superfamily GO:0016627|GO:0050660|GO:0055114 CDA09_20540 c97f187a4f59e90c87d5d2876cfa4f55 833 Pfam PF00441 Acyl-CoA dehydrogenase, C-terminal domain 363 510 1.0E-12 T 01-11-2018 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal GO:0016627|GO:0055114 CDA09_20540 c97f187a4f59e90c87d5d2876cfa4f55 833 Gene3D G3DSA:2.40.110.10 239 362 3.5E-91 T 01-11-2018 CDA09_08440 d71d39efb8af9b415497b27d66b674f4 297 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 7 64 6.4E-17 T 01-11-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 CDA09_08440 d71d39efb8af9b415497b27d66b674f4 297 Gene3D G3DSA:1.10.10.10 4 95 7.3E-20 T 01-11-2018 IPR036388 Winged helix-like DNA-binding domain superfamily CDA09_08440 d71d39efb8af9b415497b27d66b674f4 297 SUPERFAMILY SSF46785 4 87 2.53E-18 T 01-11-2018 IPR036390 Winged helix DNA-binding domain superfamily CDA09_08440 d71d39efb8af9b415497b27d66b674f4 297 SUPERFAMILY SSF53850 95 289 1.18E-25 T 01-11-2018 CDA09_08440 d71d39efb8af9b415497b27d66b674f4 297 Gene3D G3DSA:3.40.190.290 96 295 1.2E-13 T 01-11-2018 CDA09_08440 d71d39efb8af9b415497b27d66b674f4 297 Pfam PF03466 LysR substrate binding domain 116 290 2.1E-17 T 01-11-2018 IPR005119 LysR, substrate-binding CDA09_13495 10cd8c063e1701dfb91c3a71836aca3e 273 SUPERFAMILY SSF52540 88 230 2.84E-21 T 01-11-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CDA09_13495 10cd8c063e1701dfb91c3a71836aca3e 273 Gene3D G3DSA:3.40.50.300 59 246 5.8E-42 T 01-11-2018 CDA09_13495 10cd8c063e1701dfb91c3a71836aca3e 273 SMART SM00382 95 232 1.5E-8 T 01-11-2018 IPR003593 AAA+ ATPase domain CDA09_13495 10cd8c063e1701dfb91c3a71836aca3e 273 PIRSF PIRSF003073 1 250 4.9E-71 T 01-11-2018 IPR028350 DNA replication protein DnaC/insertion sequence putative ATP-binding protein CDA09_13495 10cd8c063e1701dfb91c3a71836aca3e 273 Pfam PF01695 IstB-like ATP binding protein 52 228 9.9E-61 T 01-11-2018 IPR002611 IstB-like ATP-binding protein GO:0005524 CDA09_20355 b7779b8cc45907ecab67cd3924010d47 787 Pfam PF00912 Transglycosylase 56 229 1.3E-65 T 01-11-2018 IPR001264 Glycosyl transferase, family 51 KEGG: 00550+2.4.1.129|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471 CDA09_20355 b7779b8cc45907ecab67cd3924010d47 787 Pfam PF00905 Penicillin binding protein transpeptidase domain 423 668 7.7E-38 T 01-11-2018 IPR001460 Penicillin-binding protein, transpeptidase GO:0008658 CDA09_20355 b7779b8cc45907ecab67cd3924010d47 787 TIGRFAM TIGR02074 PBP_1a_fam: penicillin-binding protein, 1A family 65 706 5.6E-189 T 01-11-2018 CDA09_20355 b7779b8cc45907ecab67cd3924010d47 787 Gene3D G3DSA:1.10.3810.10 57 249 7.0E-78 T 01-11-2018 IPR036950 Penicillin binding protein transglycosylase domain KEGG: 00550+2.4.1.129|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471 CDA09_20355 b7779b8cc45907ecab67cd3924010d47 787 SUPERFAMILY SSF56601 211 724 4.88E-124 T 01-11-2018 IPR012338 Beta-lactamase/transpeptidase-like CDA09_20355 b7779b8cc45907ecab67cd3924010d47 787 SUPERFAMILY SSF53955 42 250 7.87E-78 T 01-11-2018 IPR023346 Lysozyme-like domain superfamily CDA09_20355 b7779b8cc45907ecab67cd3924010d47 787 Pfam PF17092 Penicillin-binding protein OB-like domain 317 420 1.5E-18 T 01-11-2018 IPR031376 Penicillin-binding protein, OB-like domain KEGG: 00550+2.4.1.129+3.4.16.4|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471 CDA09_20355 b7779b8cc45907ecab67cd3924010d47 787 Gene3D G3DSA:2.40.50.140 348 418 1.3E-17 T 01-11-2018 CDA09_17035 eab0a13b0360fc5e97d95adb8ce71bae 345 Pfam PF00107 Zinc-binding dehydrogenase 160 283 1.2E-19 T 01-11-2018 IPR013149 Alcohol dehydrogenase, C-terminal GO:0055114 CDA09_17035 eab0a13b0360fc5e97d95adb8ce71bae 345 SUPERFAMILY SSF51735 128 306 2.88E-41 T 01-11-2018 IPR036291 NAD(P)-binding domain superfamily CDA09_17035 eab0a13b0360fc5e97d95adb8ce71bae 345 SMART SM00829 20 338 2.2E-5 T 01-11-2018 IPR020843 Polyketide synthase, enoylreductase domain GO:0016491 CDA09_17035 eab0a13b0360fc5e97d95adb8ce71bae 345 SUPERFAMILY SSF50129 6 141 1.4E-26 T 01-11-2018 IPR011032 GroES-like superfamily CDA09_17035 eab0a13b0360fc5e97d95adb8ce71bae 345 Gene3D G3DSA:3.90.180.10 21 337 2.3E-104 T 01-11-2018 CDA09_17035 eab0a13b0360fc5e97d95adb8ce71bae 345 Pfam PF16884 N-terminal domain of oxidoreductase 7 110 2.0E-29 T 01-11-2018 CDA09_17035 eab0a13b0360fc5e97d95adb8ce71bae 345 Gene3D G3DSA:3.40.50.720 128 309 2.3E-104 T 01-11-2018 CDA09_19835 a3fb8b098a9bc729633fa02333406a41 230 Gene3D G3DSA:3.40.50.2300 1 127 2.4E-34 T 01-11-2018 CDA09_19835 a3fb8b098a9bc729633fa02333406a41 230 Gene3D G3DSA:1.10.10.10 128 229 1.3E-30 T 01-11-2018 IPR036388 Winged helix-like DNA-binding domain superfamily CDA09_19835 a3fb8b098a9bc729633fa02333406a41 230 SMART SM00448 6 116 5.7E-36 T 01-11-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 CDA09_19835 a3fb8b098a9bc729633fa02333406a41 230 SMART SM00862 152 228 3.3E-23 T 01-11-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 CDA09_19835 a3fb8b098a9bc729633fa02333406a41 230 Pfam PF00486 Transcriptional regulatory protein, C terminal 152 228 6.6E-21 T 01-11-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 CDA09_19835 a3fb8b098a9bc729633fa02333406a41 230 SUPERFAMILY SSF52172 7 190 6.12E-40 T 01-11-2018 IPR011006 CheY-like superfamily CDA09_19835 a3fb8b098a9bc729633fa02333406a41 230 Pfam PF00072 Response regulator receiver domain 8 117 8.8E-27 T 01-11-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 CDA09_11225 551072044fe01f44c59e87fc87720b80 416 Pfam PF01266 FAD dependent oxidoreductase 34 380 2.3E-56 T 01-11-2018 IPR006076 FAD dependent oxidoreductase GO:0016491|GO:0055114 CDA09_11225 551072044fe01f44c59e87fc87720b80 416 TIGRFAM TIGR01373 soxB: sarcosine oxidase, beta subunit family 3 408 1.5E-220 T 01-11-2018 IPR006278 Sarcosine oxidase subunit beta GO:0008115|GO:0046653|GO:0055114 KEGG: 00260+1.5.3.1|MetaCyc: PWY-3661|MetaCyc: PWY-4722 CDA09_11225 551072044fe01f44c59e87fc87720b80 416 Gene3D G3DSA:3.30.9.10 115 346 3.8E-112 T 01-11-2018 CDA09_11225 551072044fe01f44c59e87fc87720b80 416 SUPERFAMILY SSF51905 32 403 1.56E-51 T 01-11-2018 IPR036188 FAD/NAD(P)-binding domain superfamily CDA09_11225 551072044fe01f44c59e87fc87720b80 416 Gene3D G3DSA:3.50.50.60 34 389 3.8E-112 T 01-11-2018 IPR036188 FAD/NAD(P)-binding domain superfamily CDA09_22680 3f2b1d84d36f8503d97425d0fe026623 140 SUPERFAMILY SSF54637 2 135 1.28E-31 T 01-11-2018 IPR029069 HotDog domain superfamily CDA09_22680 3f2b1d84d36f8503d97425d0fe026623 140 Gene3D G3DSA:3.10.129.10 1 136 1.2E-28 T 01-11-2018 CDA09_22680 3f2b1d84d36f8503d97425d0fe026623 140 Pfam PF03061 Thioesterase superfamily 18 99 3.8E-8 T 01-11-2018 IPR006683 Thioesterase domain Reactome: R-HSA-77289 CDA09_20950 3676e93ff57d8c723a745e523664c751 691 SUPERFAMILY SSF53706 7 576 4.06E-169 T 01-11-2018 CDA09_20950 3676e93ff57d8c723a745e523664c751 691 SUPERFAMILY SSF50692 529 691 7.23E-40 T 01-11-2018 IPR009010 Aspartate decarboxylase-like domain superfamily CDA09_20950 3676e93ff57d8c723a745e523664c751 691 Pfam PF00384 Molybdopterin oxidoreductase 64 473 1.4E-54 T 01-11-2018 IPR006656 Molybdopterin oxidoreductase GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 CDA09_20950 3676e93ff57d8c723a745e523664c751 691 Pfam PF01568 Molydopterin dinucleotide binding domain 575 684 2.5E-27 T 01-11-2018 IPR006657 Molybdopterin dinucleotide-binding domain GO:0016491|GO:0043546|GO:0055114 CDA09_20950 3676e93ff57d8c723a745e523664c751 691 Gene3D G3DSA:2.20.25.90 2 66 1.3E-11 T 01-11-2018 CDA09_20950 3676e93ff57d8c723a745e523664c751 691 Pfam PF04879 Molybdopterin oxidoreductase Fe4S4 domain 7 61 8.4E-12 T 01-11-2018 IPR006963 Molybdopterin oxidoreductase, 4Fe-4S domain GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 CDA09_20950 3676e93ff57d8c723a745e523664c751 691 Gene3D G3DSA:2.40.40.20 548 691 5.8E-39 T 01-11-2018 CDA09_20950 3676e93ff57d8c723a745e523664c751 691 Gene3D G3DSA:3.40.50.740 75 478 9.0E-150 T 01-11-2018 CDA09_20950 3676e93ff57d8c723a745e523664c751 691 Gene3D G3DSA:3.40.228.10 141 545 9.0E-150 T 01-11-2018 CDA09_20950 3676e93ff57d8c723a745e523664c751 691 Gene3D G3DSA:3.30.2070.10 433 520 9.0E-150 T 01-11-2018 CDA09_20950 3676e93ff57d8c723a745e523664c751 691 ProSitePatterns PS00490 Prokaryotic molybdopterin oxidoreductases signature 2. 418 435 - T 01-11-2018 IPR006655 Molybdopterin oxidoreductase, prokaryotic, conserved site GO:0009055|GO:0016491|GO:0055114 CDA09_20950 3676e93ff57d8c723a745e523664c751 691 SMART SM00926 6 61 2.4E-18 T 01-11-2018 IPR006963 Molybdopterin oxidoreductase, 4Fe-4S domain GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 CDA09_11950 92cad7af61d92a3ba9e71ef039ce1def 195 Pfam PF00034 Cytochrome c 73 159 1.2E-12 T 01-11-2018 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 Reactome: R-HSA-111457|Reactome: R-HSA-111458|Reactome: R-HSA-111459|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 CDA09_11950 92cad7af61d92a3ba9e71ef039ce1def 195 PRINTS PR00605 Class IC cytochrome C signature 133 155 4.4E-8 T 01-11-2018 IPR008168 Cytochrome c, class IC GO:0005506|GO:0009055 CDA09_11950 92cad7af61d92a3ba9e71ef039ce1def 195 PRINTS PR00605 Class IC cytochrome C signature 80 91 4.4E-8 T 01-11-2018 IPR008168 Cytochrome c, class IC GO:0005506|GO:0009055 CDA09_11950 92cad7af61d92a3ba9e71ef039ce1def 195 SUPERFAMILY SSF46626 73 177 8.02E-28 T 01-11-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 CDA09_11950 92cad7af61d92a3ba9e71ef039ce1def 195 Gene3D G3DSA:1.10.760.10 57 184 4.7E-43 T 01-11-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 CDA09_09550 ea8667eafb40741c1722072ef9168b43 515 Gene3D G3DSA:3.90.220.20 265 481 4.7E-36 T 01-11-2018 CDA09_09550 ea8667eafb40741c1722072ef9168b43 515 Gene3D G3DSA:3.90.220.20 3 209 1.1E-35 T 01-11-2018 CDA09_09550 ea8667eafb40741c1722072ef9168b43 515 SUPERFAMILY SSF116734 6 217 3.92E-33 T 01-11-2018 CDA09_09550 ea8667eafb40741c1722072ef9168b43 515 SUPERFAMILY SSF116734 272 490 2.13E-35 T 01-11-2018 CDA09_09550 ea8667eafb40741c1722072ef9168b43 515 Pfam PF01420 Type I restriction modification DNA specificity domain 9 184 9.7E-12 T 01-11-2018 IPR000055 Restriction endonuclease, type I, HsdS GO:0003677|GO:0006304 CDA09_09550 ea8667eafb40741c1722072ef9168b43 515 Pfam PF01420 Type I restriction modification DNA specificity domain 277 440 4.1E-7 T 01-11-2018 IPR000055 Restriction endonuclease, type I, HsdS GO:0003677|GO:0006304 CDA09_18130 067b41b230c286457a1c740bdb2cfb02 412 ProDom PD004193 ACETYLTRANSFERASE ORNITHINE ARGININE BIOSYNTHESIS ARGJ GLUTAMATE N-ACETYLTRANSFERASE TRANSFERASE ACYLTRANSFERASE BIFUNCTIONAL 24 410 0.0 T 01-11-2018 CDA09_18130 067b41b230c286457a1c740bdb2cfb02 412 TIGRFAM TIGR00120 ArgJ: glutamate N-acetyltransferase/amino-acid acetyltransferase 17 412 6.6E-124 T 01-11-2018 IPR002813 Arginine biosynthesis protein ArgJ GO:0004358|GO:0006526 KEGG: 00220+2.3.1.35+2.3.1.1|MetaCyc: PWY-5154 CDA09_18130 067b41b230c286457a1c740bdb2cfb02 412 Gene3D G3DSA:3.10.20.340 279 412 2.9E-42 T 01-11-2018 CDA09_18130 067b41b230c286457a1c740bdb2cfb02 412 Pfam PF01960 ArgJ family 23 412 3.3E-140 T 01-11-2018 IPR002813 Arginine biosynthesis protein ArgJ GO:0004358|GO:0006526 KEGG: 00220+2.3.1.35+2.3.1.1|MetaCyc: PWY-5154 CDA09_18130 067b41b230c286457a1c740bdb2cfb02 412 Hamap MF_01106 Arginine biosynthesis bifunctional protein ArgJ [argJ]. 1 412 157.178 T 01-11-2018 IPR002813 Arginine biosynthesis protein ArgJ GO:0004358|GO:0006526 KEGG: 00220+2.3.1.35+2.3.1.1|MetaCyc: PWY-5154 CDA09_18130 067b41b230c286457a1c740bdb2cfb02 412 SUPERFAMILY SSF56266 16 409 6.15E-137 T 01-11-2018 IPR016117 ArgJ-like domain superfamily KEGG: 00220+2.3.1.35+2.3.1.1|MetaCyc: PWY-5154 CDA09_18130 067b41b230c286457a1c740bdb2cfb02 412 Gene3D G3DSA:3.60.70.12 10 278 5.6E-89 T 01-11-2018 IPR016117 ArgJ-like domain superfamily KEGG: 00220+2.3.1.35+2.3.1.1|MetaCyc: PWY-5154 CDA09_01980 96be1e9920ace9dc71c58b0c10bf026c 265 TIGRFAM TIGR01291 nodJ: ABC-2 type transporter, NodJ family 19 263 2.6E-81 T 01-11-2018 IPR005981 ABC-2 type transporter, NodJ GO:0005215|GO:0009877|GO:0015772|GO:0016020 CDA09_01980 96be1e9920ace9dc71c58b0c10bf026c 265 Pfam PF01061 ABC-2 type transporter 22 229 3.5E-24 T 01-11-2018 IPR013525 ABC-2 type transporter GO:0016020 Reactome: R-HSA-1369062 CDA09_01980 96be1e9920ace9dc71c58b0c10bf026c 265 PRINTS PR00164 ABC-2 type transport system membrane protein signature 68 90 1.1E-50 T 01-11-2018 IPR000412 ABC-2 transporter GO:0016021|GO:0043190|GO:0055085 CDA09_01980 96be1e9920ace9dc71c58b0c10bf026c 265 PRINTS PR00164 ABC-2 type transport system membrane protein signature 207 226 1.1E-50 T 01-11-2018 IPR000412 ABC-2 transporter GO:0016021|GO:0043190|GO:0055085 CDA09_01980 96be1e9920ace9dc71c58b0c10bf026c 265 PRINTS PR00164 ABC-2 type transport system membrane protein signature 113 138 1.1E-50 T 01-11-2018 IPR000412 ABC-2 transporter GO:0016021|GO:0043190|GO:0055085 CDA09_01980 96be1e9920ace9dc71c58b0c10bf026c 265 PRINTS PR00164 ABC-2 type transport system membrane protein signature 150 174 1.1E-50 T 01-11-2018 IPR000412 ABC-2 transporter GO:0016021|GO:0043190|GO:0055085 CDA09_01980 96be1e9920ace9dc71c58b0c10bf026c 265 PRINTS PR00164 ABC-2 type transport system membrane protein signature 187 206 1.1E-50 T 01-11-2018 IPR000412 ABC-2 transporter GO:0016021|GO:0043190|GO:0055085 CDA09_01980 96be1e9920ace9dc71c58b0c10bf026c 265 PRINTS PR00164 ABC-2 type transport system membrane protein signature 38 59 1.1E-50 T 01-11-2018 IPR000412 ABC-2 transporter GO:0016021|GO:0043190|GO:0055085 CDA09_01980 96be1e9920ace9dc71c58b0c10bf026c 265 PIRSF PIRSF006648 2 264 2.0E-21 T 01-11-2018 IPR000412 ABC-2 transporter GO:0016021|GO:0043190|GO:0055085 CDA09_15395 6579f2389e6a4820fe0ed893d846b2f1 388 Gene3D G3DSA:3.40.630.10 15 369 1.5E-141 T 01-11-2018 CDA09_15395 6579f2389e6a4820fe0ed893d846b2f1 388 PIRSF PIRSF005962 1 387 3.6E-131 T 01-11-2018 IPR017439 Amidohydrolase GO:0016787 CDA09_15395 6579f2389e6a4820fe0ed893d846b2f1 388 Pfam PF07687 Peptidase dimerisation domain 185 274 5.6E-9 T 01-11-2018 IPR011650 Peptidase M20, dimerisation domain CDA09_15395 6579f2389e6a4820fe0ed893d846b2f1 388 TIGRFAM TIGR01891 amidohydrolases: amidohydrolase 14 372 3.4E-110 T 01-11-2018 IPR017439 Amidohydrolase GO:0016787 CDA09_15395 6579f2389e6a4820fe0ed893d846b2f1 388 Gene3D G3DSA:3.30.70.360 181 295 1.5E-141 T 01-11-2018 CDA09_15395 6579f2389e6a4820fe0ed893d846b2f1 388 Pfam PF01546 Peptidase family M20/M25/M40 73 382 2.8E-36 T 01-11-2018 IPR002933 Peptidase M20 GO:0016787 CDA09_15395 6579f2389e6a4820fe0ed893d846b2f1 388 SUPERFAMILY SSF55031 183 296 8.9E-33 T 01-11-2018 IPR036264 Bacterial exopeptidase dimerisation domain CDA09_15395 6579f2389e6a4820fe0ed893d846b2f1 388 SUPERFAMILY SSF53187 2 385 2.83E-85 T 01-11-2018 CDA09_20245 166f47813bdddf347633456a64db6348 208 Pfam PF01292 Prokaryotic cytochrome b561 11 183 1.1E-25 T 01-11-2018 IPR011577 Cytochrome b561, bacterial/Ni-hydrogenase GO:0009055|GO:0016021 CDA09_20245 166f47813bdddf347633456a64db6348 208 SUPERFAMILY SSF81342 6 185 9.42E-32 T 01-11-2018 IPR016174 Di-haem cytochrome, transmembrane GO:0016020|GO:0022904 Reactome: R-HSA-611105 CDA09_02145 0800d8cbf0a7e7695fa5610e0ac85f1c 718 ProSitePatterns PS00600 Aminotransferases class-III pyridoxal-phosphate attachment site. 529 566 - T 01-11-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 CDA09_02145 0800d8cbf0a7e7695fa5610e0ac85f1c 718 SUPERFAMILY SSF53383 314 704 3.44E-121 T 01-11-2018 IPR015424 Pyridoxal phosphate-dependent transferase CDA09_02145 0800d8cbf0a7e7695fa5610e0ac85f1c 718 Gene3D G3DSA:3.40.640.10 364 614 7.5E-142 T 01-11-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 CDA09_02145 0800d8cbf0a7e7695fa5610e0ac85f1c 718 Gene3D G3DSA:3.90.1150.10 318 695 7.5E-142 T 01-11-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 CDA09_02145 0800d8cbf0a7e7695fa5610e0ac85f1c 718 ProSitePatterns PS01053 Arginase family signature. 236 257 - T 01-11-2018 IPR020855 Ureohydrolase, manganese-binding site GO:0016813|GO:0046872 CDA09_02145 0800d8cbf0a7e7695fa5610e0ac85f1c 718 Gene3D G3DSA:3.40.800.10 15 317 3.0E-71 T 01-11-2018 CDA09_02145 0800d8cbf0a7e7695fa5610e0ac85f1c 718 Pfam PF00202 Aminotransferase class-III 322 704 5.1E-113 T 01-11-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 CDA09_02145 0800d8cbf0a7e7695fa5610e0ac85f1c 718 PRINTS PR00116 Arginase signature 184 202 1.4E-23 T 01-11-2018 IPR006035 Ureohydrolase GO:0046872 CDA09_02145 0800d8cbf0a7e7695fa5610e0ac85f1c 718 PRINTS PR00116 Arginase signature 106 121 1.4E-23 T 01-11-2018 IPR006035 Ureohydrolase GO:0046872 CDA09_02145 0800d8cbf0a7e7695fa5610e0ac85f1c 718 PRINTS PR00116 Arginase signature 233 262 1.4E-23 T 01-11-2018 IPR006035 Ureohydrolase GO:0046872 CDA09_02145 0800d8cbf0a7e7695fa5610e0ac85f1c 718 PRINTS PR00116 Arginase signature 132 159 1.4E-23 T 01-11-2018 IPR006035 Ureohydrolase GO:0046872 CDA09_02145 0800d8cbf0a7e7695fa5610e0ac85f1c 718 SUPERFAMILY SSF52768 19 307 3.42E-60 T 01-11-2018 IPR023696 Ureohydrolase domain superfamily CDA09_02145 0800d8cbf0a7e7695fa5610e0ac85f1c 718 TIGRFAM TIGR01885 Orn_aminotrans: ornithine--oxo-acid transaminase 315 704 8.1E-152 T 01-11-2018 IPR010164 Ornithine aminotransferase GO:0004587 KEGG: 00330+2.6.1.13|MetaCyc: PWY-3341|MetaCyc: PWY-4981|MetaCyc: PWY-6344|MetaCyc: PWY-6922|Reactome: R-HSA-70614 CDA09_02145 0800d8cbf0a7e7695fa5610e0ac85f1c 718 Pfam PF00491 Arginase family 19 301 1.6E-48 T 01-11-2018 IPR006035 Ureohydrolase GO:0046872 CDA09_09185 0f52f7d9ed1c79bb6558384d796642b7 407 Gene3D G3DSA:3.40.50.10540 7 390 1.6E-117 T 01-11-2018 IPR023606 CoA-transferase family III domain superfamily CDA09_09185 0f52f7d9ed1c79bb6558384d796642b7 407 Gene3D G3DSA:3.30.1540.10 229 324 1.6E-117 T 01-11-2018 CDA09_09185 0f52f7d9ed1c79bb6558384d796642b7 407 Pfam PF02515 CoA-transferase family III 7 372 6.1E-103 T 01-11-2018 IPR003673 CoA-transferase family III GO:0003824 CDA09_09185 0f52f7d9ed1c79bb6558384d796642b7 407 SUPERFAMILY SSF89796 4 396 1.1E-114 T 01-11-2018 IPR023606 CoA-transferase family III domain superfamily CDA09_06485 603c1cdb32579736b66f7533c0b6582a 475 SUPERFAMILY SSF55874 326 448 1.01E-19 T 01-11-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily CDA09_06485 603c1cdb32579736b66f7533c0b6582a 475 Gene3D G3DSA:1.20.1440.210 55 173 9.0E-16 T 01-11-2018 CDA09_06485 603c1cdb32579736b66f7533c0b6582a 475 SMART SM00387 359 451 1.1E-6 T 01-11-2018 IPR003594 Histidine kinase/HSP90-like ATPase CDA09_06485 603c1cdb32579736b66f7533c0b6582a 475 Pfam PF05227 CHASE3 domain 58 170 5.4E-18 T 01-11-2018 IPR007891 CHASE3 CDA09_06485 603c1cdb32579736b66f7533c0b6582a 475 Gene3D G3DSA:3.30.565.10 319 452 3.7E-32 T 01-11-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily CDA09_06485 603c1cdb32579736b66f7533c0b6582a 475 Pfam PF07730 Histidine kinase 253 321 2.4E-11 T 01-11-2018 IPR011712 Signal transduction histidine kinase, subgroup 3, dimerisation and phosphoacceptor domain GO:0000155|GO:0000160|GO:0016021|GO:0046983 CDA09_06485 603c1cdb32579736b66f7533c0b6582a 475 Pfam PF13581 Histidine kinase-like ATPase domain 357 414 2.5E-7 T 01-11-2018 IPR003594 Histidine kinase/HSP90-like ATPase CDA09_14975 57996cb9166d5b5862bc2a7c45efe269 160 Gene3D G3DSA:1.10.10.10 1 141 2.9E-52 T 01-11-2018 IPR036388 Winged helix-like DNA-binding domain superfamily CDA09_14975 57996cb9166d5b5862bc2a7c45efe269 160 TIGRFAM TIGR02010 IscR: iron-sulfur cluster assembly transcription factor IscR 1 133 2.2E-65 T 01-11-2018 IPR010242 Transcription factor HTH, IscR GO:0003690|GO:0003700|GO:0006355 CDA09_14975 57996cb9166d5b5862bc2a7c45efe269 160 TIGRFAM TIGR00738 rrf2_super: Rrf2 family protein 1 130 8.7E-46 T 01-11-2018 IPR000944 Transcription regulator Rrf2-type CDA09_14975 57996cb9166d5b5862bc2a7c45efe269 160 Pfam PF02082 Transcriptional regulator 1 83 3.4E-28 T 01-11-2018 IPR000944 Transcription regulator Rrf2-type CDA09_14975 57996cb9166d5b5862bc2a7c45efe269 160 SUPERFAMILY SSF46785 2 132 5.52E-38 T 01-11-2018 IPR036390 Winged helix DNA-binding domain superfamily CDA09_12090 5199a9d1562d1cd204b69cd89232fc86 533 TIGRFAM TIGR02262 benz_CoA_lig: benzoate-CoA ligase family 20 529 2.0E-243 T 01-11-2018 IPR011957 Benzoate-CoA ligase family GO:0005524|GO:0016405 CDA09_12090 5199a9d1562d1cd204b69cd89232fc86 533 Gene3D G3DSA:3.30.300.310 435 532 9.7E-29 T 01-11-2018 CDA09_12090 5199a9d1562d1cd204b69cd89232fc86 533 SUPERFAMILY SSF56801 14 530 3.14E-148 T 01-11-2018 CDA09_12090 5199a9d1562d1cd204b69cd89232fc86 533 Pfam PF13193 AMP-binding enzyme C-terminal domain 443 521 1.1E-21 T 01-11-2018 IPR025110 AMP-binding enzyme, C-terminal domain CDA09_12090 5199a9d1562d1cd204b69cd89232fc86 533 Gene3D G3DSA:2.30.38.10 328 434 1.5E-36 T 01-11-2018 CDA09_12090 5199a9d1562d1cd204b69cd89232fc86 533 Pfam PF00501 AMP-binding enzyme 36 434 6.6E-90 T 01-11-2018 IPR000873 AMP-dependent synthetase/ligase GO:0003824 CDA09_12090 5199a9d1562d1cd204b69cd89232fc86 533 Gene3D G3DSA:1.10.10.2900 257 327 6.0E-29 T 01-11-2018 CDA09_12090 5199a9d1562d1cd204b69cd89232fc86 533 Gene3D G3DSA:3.40.50.980 17 256 2.4E-67 T 01-11-2018 CDA09_07145 d6bbef6f3056f74b61a9bb364456144b 249 SUPERFAMILY SSF53474 4 245 2.7E-47 T 01-11-2018 IPR029058 Alpha/Beta hydrolase fold CDA09_07145 d6bbef6f3056f74b61a9bb364456144b 249 Pfam PF12697 Alpha/beta hydrolase family 6 241 2.2E-22 T 01-11-2018 IPR000073 Alpha/beta hydrolase fold-1 CDA09_07145 d6bbef6f3056f74b61a9bb364456144b 249 Gene3D G3DSA:3.40.50.1820 2 247 2.3E-59 T 01-11-2018 IPR029058 Alpha/Beta hydrolase fold CDA09_07145 d6bbef6f3056f74b61a9bb364456144b 249 PRINTS PR00111 Alpha/beta hydrolase fold signature 193 207 5.7E-9 T 01-11-2018 IPR000073 Alpha/beta hydrolase fold-1 CDA09_07145 d6bbef6f3056f74b61a9bb364456144b 249 PRINTS PR00111 Alpha/beta hydrolase fold signature 68 81 5.7E-9 T 01-11-2018 IPR000073 Alpha/beta hydrolase fold-1 CDA09_07145 d6bbef6f3056f74b61a9bb364456144b 249 PRINTS PR00111 Alpha/beta hydrolase fold signature 82 95 5.7E-9 T 01-11-2018 IPR000073 Alpha/beta hydrolase fold-1 CDA09_17710 7f8015a60ce99ec0157a69bc28d3cfae 110 Pfam PF00545 ribonuclease 24 104 2.2E-28 T 01-11-2018 IPR000026 Guanine-specific ribonuclease N1/T1/U2 GO:0003723|GO:0004521 CDA09_17710 7f8015a60ce99ec0157a69bc28d3cfae 110 Gene3D G3DSA:3.10.450.30 15 109 7.4E-38 T 01-11-2018 CDA09_17710 7f8015a60ce99ec0157a69bc28d3cfae 110 SUPERFAMILY SSF53933 20 107 3.12E-35 T 01-11-2018 IPR016191 Ribonuclease/ribotoxin GO:0003723|GO:0004540 CDA09_12220 fc80bf1ff8205a0c8104f17033b4f2bc 132 SUPERFAMILY SSF52833 9 76 1.12E-13 T 01-11-2018 IPR036249 Thioredoxin-like superfamily CDA09_12220 fc80bf1ff8205a0c8104f17033b4f2bc 132 Pfam PF00085 Thioredoxin 9 69 8.3E-10 T 01-11-2018 IPR013766 Thioredoxin domain GO:0045454 CDA09_12220 fc80bf1ff8205a0c8104f17033b4f2bc 132 Gene3D G3DSA:3.40.30.10 5 82 5.1E-11 T 01-11-2018 CDA09_15325 7b76b81cf28f62997f85892e3019ef36 218 Pfam PF13419 Haloacid dehalogenase-like hydrolase 8 183 7.3E-37 T 01-11-2018 CDA09_15325 7b76b81cf28f62997f85892e3019ef36 218 TIGRFAM TIGR01549 HAD-SF-IA-v1: HAD hydrolase, family IA, variant 1 84 179 5.2E-13 T 01-11-2018 IPR006439 HAD hydrolase, subfamily IA GO:0016787 CDA09_15325 7b76b81cf28f62997f85892e3019ef36 218 SUPERFAMILY SSF56784 5 214 2.63E-58 T 01-11-2018 IPR036412 HAD-like superfamily CDA09_15325 7b76b81cf28f62997f85892e3019ef36 218 Gene3D G3DSA:3.40.50.1000 8 205 1.5E-51 T 01-11-2018 IPR023214 HAD superfamily CDA09_15325 7b76b81cf28f62997f85892e3019ef36 218 Gene3D G3DSA:1.10.150.240 20 85 1.5E-51 T 01-11-2018 IPR023198 Phosphoglycolate phosphatase-like, domain 2 CDA09_08570 446268b5b07bb6fbfdacad8bb2b7f93e 283 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 78 249 1.7E-10 T 01-11-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 CDA09_08570 446268b5b07bb6fbfdacad8bb2b7f93e 283 SUPERFAMILY SSF161098 4 249 3.92E-45 T 01-11-2018 IPR035906 MetI-like superfamily CDA09_08570 446268b5b07bb6fbfdacad8bb2b7f93e 283 Gene3D G3DSA:1.10.3720.10 8 256 2.9E-41 T 01-11-2018 IPR035906 MetI-like superfamily CDA09_00410 c396037c83cc8a0cd6bf47e25201b7d5 245 SUPERFAMILY SSF161098 22 221 2.88E-38 T 01-11-2018 IPR035906 MetI-like superfamily CDA09_00410 c396037c83cc8a0cd6bf47e25201b7d5 245 Gene3D G3DSA:1.10.3720.10 14 234 1.3E-46 T 01-11-2018 IPR035906 MetI-like superfamily CDA09_00410 c396037c83cc8a0cd6bf47e25201b7d5 245 TIGRFAM TIGR01726 HEQRo_perm_3TM: amino ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family 24 126 4.7E-19 T 01-11-2018 IPR010065 Amino acid ABC transporter, permease protein, 3-TM domain GO:0016021|GO:0022857|GO:0043190|GO:0071705 CDA09_00410 c396037c83cc8a0cd6bf47e25201b7d5 245 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 43 233 5.3E-21 T 01-11-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 CDA09_10880 5c58f2f85326d4d1a7c810edb1963be5 407 SUPERFAMILY SSF56935 27 407 2.85E-7 T 01-11-2018 CDA09_00930 baa08f7349331c790d88f50b433f5da8 512 SUPERFAMILY SSF47384 268 352 1.96E-18 T 01-11-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 CDA09_00930 baa08f7349331c790d88f50b433f5da8 512 SMART SM00387 397 509 1.6E-37 T 01-11-2018 IPR003594 Histidine kinase/HSP90-like ATPase CDA09_00930 baa08f7349331c790d88f50b433f5da8 512 Pfam PF00672 HAMP domain 232 280 3.3E-8 T 01-11-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 CDA09_00930 baa08f7349331c790d88f50b433f5da8 512 Gene3D G3DSA:1.10.287.130 235 351 4.5E-29 T 01-11-2018 CDA09_00930 baa08f7349331c790d88f50b433f5da8 512 Gene3D G3DSA:3.30.565.10 356 512 4.9E-39 T 01-11-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily CDA09_00930 baa08f7349331c790d88f50b433f5da8 512 SMART SM00388 285 351 4.4E-18 T 01-11-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 CDA09_00930 baa08f7349331c790d88f50b433f5da8 512 PRINTS PR00344 Bacterial sensor protein C-terminal signature 434 448 2.3E-13 T 01-11-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 CDA09_00930 baa08f7349331c790d88f50b433f5da8 512 PRINTS PR00344 Bacterial sensor protein C-terminal signature 493 506 2.3E-13 T 01-11-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 CDA09_00930 baa08f7349331c790d88f50b433f5da8 512 PRINTS PR00344 Bacterial sensor protein C-terminal signature 469 487 2.3E-13 T 01-11-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 CDA09_00930 baa08f7349331c790d88f50b433f5da8 512 PRINTS PR00344 Bacterial sensor protein C-terminal signature 452 462 2.3E-13 T 01-11-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 CDA09_00930 baa08f7349331c790d88f50b433f5da8 512 SUPERFAMILY SSF55874 341 507 2.1E-45 T 01-11-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily CDA09_00930 baa08f7349331c790d88f50b433f5da8 512 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 397 508 3.9E-23 T 01-11-2018 IPR003594 Histidine kinase/HSP90-like ATPase CDA09_00930 baa08f7349331c790d88f50b433f5da8 512 SUPERFAMILY SSF158472 234 281 1.7E-6 T 01-11-2018 CDA09_00930 baa08f7349331c790d88f50b433f5da8 512 Pfam PF00512 His Kinase A (phospho-acceptor) domain 286 351 6.4E-14 T 01-11-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 CDA09_00930 baa08f7349331c790d88f50b433f5da8 512 SMART SM00304 231 284 6.4E-9 T 01-11-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 CDA09_06950 4bc116ea8c990dc10d35e9e4f53265d2 164 SUPERFAMILY SSF52255 6 160 7.85E-67 T 01-11-2018 IPR035893 PurE domain superfamily Reactome: R-HSA-73817 CDA09_06950 4bc116ea8c990dc10d35e9e4f53265d2 164 Hamap MF_01929 N5-carboxyaminoimidazole ribonucleotide mutase [purE]. 7 160 33.042 T 01-11-2018 IPR033747 Class I PurE CDA09_06950 4bc116ea8c990dc10d35e9e4f53265d2 164 Gene3D G3DSA:3.40.50.7700 1 164 9.4E-76 T 01-11-2018 IPR035893 PurE domain superfamily Reactome: R-HSA-73817 CDA09_06950 4bc116ea8c990dc10d35e9e4f53265d2 164 Pfam PF00731 AIR carboxylase 7 154 7.7E-65 T 01-11-2018 IPR000031 PurE domain GO:0006189 Reactome: R-HSA-73817 CDA09_06950 4bc116ea8c990dc10d35e9e4f53265d2 164 PIRSF PIRSF001338 2 163 5.9E-68 T 01-11-2018 IPR024694 PurE, prokaryotic type GO:0006189 KEGG: 00230+5.4.99.18|MetaCyc: PWY-6123|MetaCyc: PWY-7234 CDA09_06950 4bc116ea8c990dc10d35e9e4f53265d2 164 TIGRFAM TIGR01162 purE: phosphoribosylaminoimidazole carboxylase, catalytic subunit 7 159 5.7E-67 T 01-11-2018 IPR000031 PurE domain GO:0006189 Reactome: R-HSA-73817 CDA09_06950 4bc116ea8c990dc10d35e9e4f53265d2 164 SMART SM01001 5 156 1.9E-104 T 01-11-2018 IPR000031 PurE domain GO:0006189 Reactome: R-HSA-73817 CDA09_20545 4aecb51f82a713759054a81c4a3b4403 240 SUPERFAMILY SSF46689 4 81 4.0E-20 T 01-11-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 CDA09_20545 4aecb51f82a713759054a81c4a3b4403 240 SUPERFAMILY SSF48498 89 218 9.78E-40 T 01-11-2018 IPR036271 Tetracyclin repressor-like, C-terminal domain superfamily CDA09_20545 4aecb51f82a713759054a81c4a3b4403 240 ProSitePatterns PS01081 TetR-type HTH domain signature. 29 60 - T 01-11-2018 IPR023772 DNA-binding HTH domain, TetR-type, conserved site CDA09_20545 4aecb51f82a713759054a81c4a3b4403 240 Gene3D G3DSA:1.10.357.10 15 217 1.3E-69 T 01-11-2018 CDA09_20545 4aecb51f82a713759054a81c4a3b4403 240 Pfam PF00440 Bacterial regulatory proteins, tetR family 17 63 4.4E-15 T 01-11-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 CDA09_20545 4aecb51f82a713759054a81c4a3b4403 240 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 38 61 4.9E-8 T 01-11-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 CDA09_20545 4aecb51f82a713759054a81c4a3b4403 240 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 17 30 4.9E-8 T 01-11-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 CDA09_01890 6ba6687898bb499300cfbd1bc5480977 315 Gene3D G3DSA:3.40.190.290 96 296 2.6E-63 T 01-11-2018 CDA09_01890 6ba6687898bb499300cfbd1bc5480977 315 SUPERFAMILY SSF53850 94 301 4.35E-47 T 01-11-2018 CDA09_01890 6ba6687898bb499300cfbd1bc5480977 315 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 9 67 1.4E-17 T 01-11-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 CDA09_01890 6ba6687898bb499300cfbd1bc5480977 315 Pfam PF03466 LysR substrate binding domain 93 298 2.2E-46 T 01-11-2018 IPR005119 LysR, substrate-binding CDA09_01890 6ba6687898bb499300cfbd1bc5480977 315 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 45 56 8.0E-5 T 01-11-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 CDA09_01890 6ba6687898bb499300cfbd1bc5480977 315 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 24 35 8.0E-5 T 01-11-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 CDA09_01890 6ba6687898bb499300cfbd1bc5480977 315 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 35 45 8.0E-5 T 01-11-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 CDA09_01890 6ba6687898bb499300cfbd1bc5480977 315 Gene3D G3DSA:1.10.10.10 7 93 1.8E-23 T 01-11-2018 IPR036388 Winged helix-like DNA-binding domain superfamily CDA09_01890 6ba6687898bb499300cfbd1bc5480977 315 SUPERFAMILY SSF46785 6 116 2.73E-20 T 01-11-2018 IPR036390 Winged helix DNA-binding domain superfamily CDA09_16290 9595c7057dd8d162a51db6fd9492d42a 158 SUPERFAMILY SSF46557 3 78 7.98E-28 T 01-11-2018 IPR036805 Transcription elongation factor, GreA/GreB, N-terminal domain superfamily GO:0003677|GO:0032784 CDA09_16290 9595c7057dd8d162a51db6fd9492d42a 158 TIGRFAM TIGR01462 greA: transcription elongation factor GreA 5 155 8.7E-57 T 01-11-2018 IPR006359 Transcription elongation factor GreA GO:0003677|GO:0032784 CDA09_16290 9595c7057dd8d162a51db6fd9492d42a 158 PIRSF PIRSF006092 1 158 6.2E-52 T 01-11-2018 IPR023459 Transcription elongation factor GreA/GreB family GO:0070063 CDA09_16290 9595c7057dd8d162a51db6fd9492d42a 158 Hamap MF_00105 Transcription elongation factor GreA [greA]. 2 156 32.364 T 01-11-2018 IPR028624 Transcription elongation factor GreA/GreB GO:0003677|GO:0032784|GO:0070063 CDA09_16290 9595c7057dd8d162a51db6fd9492d42a 158 Pfam PF01272 Transcription elongation factor, GreA/GreB, C-term 84 157 1.8E-27 T 01-11-2018 IPR001437 Transcription elongation factor, GreA/GreB, C-terminal GO:0003677|GO:0032784 CDA09_16290 9595c7057dd8d162a51db6fd9492d42a 158 Gene3D G3DSA:1.10.287.180 1 75 2.6E-31 T 01-11-2018 IPR036805 Transcription elongation factor, GreA/GreB, N-terminal domain superfamily GO:0003677|GO:0032784 CDA09_16290 9595c7057dd8d162a51db6fd9492d42a 158 Gene3D G3DSA:3.10.50.30 80 158 8.2E-28 T 01-11-2018 IPR036953 Transcription elongation factor GreA/GreB, C-terminal domain superfamily GO:0003677|GO:0032784 CDA09_16290 9595c7057dd8d162a51db6fd9492d42a 158 ProSitePatterns PS00829 Prokaryotic transcription elongation factors signature 1. 17 48 - T 01-11-2018 IPR018151 Transcription elongation factor, GreA/GreB, conserved site GO:0003677|GO:0032784 CDA09_16290 9595c7057dd8d162a51db6fd9492d42a 158 Pfam PF03449 Transcription elongation factor, N-terminal 5 74 7.0E-32 T 01-11-2018 IPR022691 Transcription elongation factor, GreA/GreB, N-terminal GO:0003677|GO:0032784 CDA09_16290 9595c7057dd8d162a51db6fd9492d42a 158 SUPERFAMILY SSF54534 83 157 4.58E-23 T 01-11-2018 CDA09_16290 9595c7057dd8d162a51db6fd9492d42a 158 ProSitePatterns PS00830 Prokaryotic transcription elongation factors signature 2. 121 137 - T 01-11-2018 IPR018151 Transcription elongation factor, GreA/GreB, conserved site GO:0003677|GO:0032784 CDA09_16875 ad0255d4e8059a7d7383bd7ee4f773af 474 Gene3D G3DSA:1.20.210.10 1 469 7.8E-209 T 01-11-2018 IPR036927 Cytochrome c oxidase-like, subunit I superfamily GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 CDA09_16875 ad0255d4e8059a7d7383bd7ee4f773af 474 TIGRFAM TIGR00780 ccoN: cytochrome c oxidase, cbb3-type, subunit I 6 466 9.3E-238 T 01-11-2018 IPR004677 Cytochrome c oxidase cbb3-type, subunit I GO:0004129|GO:0045278|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279 CDA09_16875 ad0255d4e8059a7d7383bd7ee4f773af 474 SUPERFAMILY SSF81442 6 464 1.57E-128 T 01-11-2018 IPR036927 Cytochrome c oxidase-like, subunit I superfamily GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 CDA09_16875 ad0255d4e8059a7d7383bd7ee4f773af 474 ProSitePatterns PS00077 Heme-copper oxidase catalytic subunit, copper B binding region signature. 200 255 - T 01-11-2018 IPR023615 Cytochrome c oxidase, subunit I, copper-binding site GO:0004129|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 CDA09_16875 ad0255d4e8059a7d7383bd7ee4f773af 474 Pfam PF00115 Cytochrome C and Quinol oxidase polypeptide I 10 440 6.3E-118 T 01-11-2018 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 CDA09_01570 2957ae550422d5e3a2a7bb63e142707e 1028 Gene3D G3DSA:3.30.70.270 589 763 2.6E-61 T 01-11-2018 CDA09_01570 2957ae550422d5e3a2a7bb63e142707e 1028 Pfam PF00563 EAL domain 766 1001 2.3E-76 T 01-11-2018 IPR001633 EAL domain CDA09_01570 2957ae550422d5e3a2a7bb63e142707e 1028 SUPERFAMILY SSF55785 362 465 1.24E-10 T 01-11-2018 IPR035965 PAS domain superfamily CDA09_01570 2957ae550422d5e3a2a7bb63e142707e 1028 SUPERFAMILY SSF141868 766 1012 1.19E-88 T 01-11-2018 IPR035919 EAL domain superfamily CDA09_01570 2957ae550422d5e3a2a7bb63e142707e 1028 Gene3D G3DSA:2.10.70.100 413 457 1.4E-6 T 01-11-2018 CDA09_01570 2957ae550422d5e3a2a7bb63e142707e 1028 Pfam PF00990 Diguanylate cyclase, GGDEF domain 589 746 2.2E-48 T 01-11-2018 IPR000160 GGDEF domain CDA09_01570 2957ae550422d5e3a2a7bb63e142707e 1028 SMART SM00086 536 578 0.0028 T 01-11-2018 IPR001610 PAC motif CDA09_01570 2957ae550422d5e3a2a7bb63e142707e 1028 SMART SM00086 416 456 38.0 T 01-11-2018 IPR001610 PAC motif CDA09_01570 2957ae550422d5e3a2a7bb63e142707e 1028 Gene3D G3DSA:3.20.20.450 764 1013 2.1E-102 T 01-11-2018 IPR035919 EAL domain superfamily CDA09_01570 2957ae550422d5e3a2a7bb63e142707e 1028 SMART SM00267 578 750 6.4E-65 T 01-11-2018 IPR000160 GGDEF domain CDA09_01570 2957ae550422d5e3a2a7bb63e142707e 1028 Gene3D G3DSA:3.30.450.20 466 588 2.3E-35 T 01-11-2018 CDA09_01570 2957ae550422d5e3a2a7bb63e142707e 1028 Pfam PF13426 PAS domain 476 577 1.3E-16 T 01-11-2018 IPR000014 PAS domain CDA09_01570 2957ae550422d5e3a2a7bb63e142707e 1028 SMART SM00091 464 530 3.4E-6 T 01-11-2018 IPR000014 PAS domain CDA09_01570 2957ae550422d5e3a2a7bb63e142707e 1028 SMART SM00091 344 411 8.1 T 01-11-2018 IPR000014 PAS domain CDA09_01570 2957ae550422d5e3a2a7bb63e142707e 1028 SUPERFAMILY SSF55073 594 751 5.57E-50 T 01-11-2018 IPR029787 Nucleotide cyclase CDA09_01570 2957ae550422d5e3a2a7bb63e142707e 1028 Gene3D G3DSA:3.30.450.20 340 412 5.6E-11 T 01-11-2018 CDA09_01570 2957ae550422d5e3a2a7bb63e142707e 1028 SMART SM00052 760 1006 2.8E-116 T 01-11-2018 IPR001633 EAL domain CDA09_01570 2957ae550422d5e3a2a7bb63e142707e 1028 SUPERFAMILY SSF55785 470 576 9.25E-28 T 01-11-2018 IPR035965 PAS domain superfamily CDA09_01570 2957ae550422d5e3a2a7bb63e142707e 1028 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 471 584 1.5E-19 T 01-11-2018 IPR000014 PAS domain CDA09_01570 2957ae550422d5e3a2a7bb63e142707e 1028 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 587 748 5.3E-41 T 01-11-2018 IPR000160 GGDEF domain CDA09_16310 b0aee6d307a84a6373a079371bfb044f 137 Gene3D G3DSA:3.30.1450.10 37 116 2.6E-28 T 01-11-2018 IPR037873 BamE-like CDA09_16310 b0aee6d307a84a6373a079371bfb044f 137 Hamap MF_00925 Outer membrane protein assembly factor BamE [bamE]. 6 123 27.938 T 01-11-2018 IPR026592 Outer membrane protein assembly factor BamE CDA09_16310 b0aee6d307a84a6373a079371bfb044f 137 Pfam PF04355 SmpA / OmlA family 38 105 3.7E-27 T 01-11-2018 IPR007450 Lipoprotein SmpA/OmlA GO:0019867 CDA09_02090 a9d82a65e50f3f01ec410a44010e7a82 339 Pfam PF12849 PBP superfamily domain 25 307 1.8E-64 T 01-11-2018 IPR024370 PBP domain CDA09_02090 a9d82a65e50f3f01ec410a44010e7a82 339 PIRSF PIRSF002756 4 338 6.7E-107 T 01-11-2018 IPR005673 Phosphate ABC transporter, substrate-binding protein PstS GO:0035435|GO:0042301|GO:0043190 CDA09_02090 a9d82a65e50f3f01ec410a44010e7a82 339 Gene3D G3DSA:3.40.190.10 102 278 9.8E-129 T 01-11-2018 CDA09_02090 a9d82a65e50f3f01ec410a44010e7a82 339 SUPERFAMILY SSF53850 28 335 1.56E-101 T 01-11-2018 CDA09_02090 a9d82a65e50f3f01ec410a44010e7a82 339 TIGRFAM TIGR00975 3a0107s03: phosphate ABC transporter, phosphate-binding protein PstS 28 336 1.0E-124 T 01-11-2018 IPR005673 Phosphate ABC transporter, substrate-binding protein PstS GO:0035435|GO:0042301|GO:0043190 CDA09_02090 a9d82a65e50f3f01ec410a44010e7a82 339 Gene3D G3DSA:3.40.190.10 29 324 9.8E-129 T 01-11-2018 CDA09_02915 81f2611eb5fbbe9d30ca47dc22d1a0a0 630 SUPERFAMILY SSF56801 3 625 4.45E-154 T 01-11-2018 CDA09_02915 81f2611eb5fbbe9d30ca47dc22d1a0a0 630 ProSitePatterns PS00455 Putative AMP-binding domain signature. 239 250 - T 01-11-2018 IPR020845 AMP-binding, conserved site CDA09_02915 81f2611eb5fbbe9d30ca47dc22d1a0a0 630 Gene3D G3DSA:3.40.50.12780 33 495 4.0E-94 T 01-11-2018 CDA09_02915 81f2611eb5fbbe9d30ca47dc22d1a0a0 630 Gene3D G3DSA:3.30.300.30 498 630 5.5E-26 T 01-11-2018 CDA09_02915 81f2611eb5fbbe9d30ca47dc22d1a0a0 630 Pfam PF00501 AMP-binding enzyme 60 502 1.0E-73 T 01-11-2018 IPR000873 AMP-dependent synthetase/ligase GO:0003824 CDA09_02915 81f2611eb5fbbe9d30ca47dc22d1a0a0 630 Pfam PF13193 AMP-binding enzyme C-terminal domain 511 594 9.6E-22 T 01-11-2018 IPR025110 AMP-binding enzyme, C-terminal domain CDA09_02915 81f2611eb5fbbe9d30ca47dc22d1a0a0 630 Pfam PF16177 Acetyl-coenzyme A synthetase N-terminus 4 58 1.3E-20 T 01-11-2018 IPR032387 Acetyl-coenzyme A synthetase, N-terminal domain KEGG: 00010+6.2.1.1|KEGG: 00620+6.2.1.1|KEGG: 00630+6.2.1.1|KEGG: 00640+6.2.1.1|KEGG: 00680+6.2.1.1|KEGG: 00720+6.2.1.1|MetaCyc: PWY-5108|MetaCyc: PWY-5132|MetaCyc: PWY-5133|MetaCyc: PWY-6672|MetaCyc: PWY-7118|MetaCyc: PWY-7857 CDA09_02915 81f2611eb5fbbe9d30ca47dc22d1a0a0 630 TIGRFAM TIGR02316 propion_prpE: propionate--CoA ligase 3 628 0.0 T 01-11-2018 IPR012694 Propionate--CoA ligase GO:0019629|GO:0050218 KEGG: 00640+6.2.1.17|MetaCyc: PWY-3941|MetaCyc: PWY-5104|MetaCyc: PWY-5747 CDA09_08470 f5a182bd7f4107cdb864a5f1166aed3e 345 Pfam PF07883 Cupin domain 96 164 5.7E-19 T 01-11-2018 IPR013096 Cupin 2, conserved barrel CDA09_08470 f5a182bd7f4107cdb864a5f1166aed3e 345 Gene3D G3DSA:2.60.120.10 11 345 1.3E-95 T 01-11-2018 IPR014710 RmlC-like jelly roll fold CDA09_08470 f5a182bd7f4107cdb864a5f1166aed3e 345 SUPERFAMILY SSF51182 9 342 1.56E-89 T 01-11-2018 IPR011051 RmlC-like cupin domain superfamily CDA09_07625 c110f468f4f509e49883fc498c132c6b 496 Pfam PF13676 TIR domain 5 110 1.5E-19 T 01-11-2018 IPR000157 Toll/interleukin-1 receptor homology (TIR) domain GO:0005515|GO:0007165 CDA09_07625 c110f468f4f509e49883fc498c132c6b 496 Pfam PF14516 AAA-like domain 163 492 3.9E-69 T 01-11-2018 CDA09_07625 c110f468f4f509e49883fc498c132c6b 496 Gene3D G3DSA:3.40.50.10140 2 129 9.0E-21 T 01-11-2018 IPR035897 Toll/interleukin-1 receptor homology (TIR) domain superfamily CDA09_07625 c110f468f4f509e49883fc498c132c6b 496 SUPERFAMILY SSF52200 3 107 4.05E-21 T 01-11-2018 IPR035897 Toll/interleukin-1 receptor homology (TIR) domain superfamily CDA09_07625 c110f468f4f509e49883fc498c132c6b 496 Gene3D G3DSA:3.40.50.300 172 330 3.9E-8 T 01-11-2018 CDA09_07625 c110f468f4f509e49883fc498c132c6b 496 SUPERFAMILY SSF52540 187 406 5.56E-12 T 01-11-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CDA09_05265 e18aff4899990a65aa1dccac0b5bb5d7 148 Gene3D G3DSA:2.30.30.40 83 144 1.9E-7 T 01-11-2018 CDA09_05265 e18aff4899990a65aa1dccac0b5bb5d7 148 Pfam PF06347 Bacterial SH3 domain 92 147 7.7E-12 T 01-11-2018 IPR010466 Protein of unknown function DUF1058 CDA09_05265 e18aff4899990a65aa1dccac0b5bb5d7 148 Pfam PF06347 Bacterial SH3 domain 31 83 4.4E-12 T 01-11-2018 IPR010466 Protein of unknown function DUF1058 CDA09_15530 a5b6fb3a9a6ae6a36c61cc782c52e620 135 Pfam PF13463 Winged helix DNA-binding domain 32 93 1.4E-5 T 01-11-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 CDA09_15530 a5b6fb3a9a6ae6a36c61cc782c52e620 135 SUPERFAMILY SSF46785 5 134 2.73E-23 T 01-11-2018 IPR036390 Winged helix DNA-binding domain superfamily CDA09_15530 a5b6fb3a9a6ae6a36c61cc782c52e620 135 SMART SM00347 21 120 7.7E-10 T 01-11-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 CDA09_15530 a5b6fb3a9a6ae6a36c61cc782c52e620 135 Gene3D G3DSA:1.10.10.10 1 135 3.2E-24 T 01-11-2018 IPR036388 Winged helix-like DNA-binding domain superfamily CDA09_17290 bd8430175af1ae0c813bad46b374443a 410 ProSitePatterns PS00216 Sugar transport proteins signature 1. 277 294 - T 01-11-2018 IPR005829 Sugar transporter, conserved site GO:0005215|GO:0016021|GO:0055085 CDA09_17290 bd8430175af1ae0c813bad46b374443a 410 ProSitePatterns PS00217 Sugar transport proteins signature 2. 109 134 - T 01-11-2018 IPR005829 Sugar transporter, conserved site GO:0005215|GO:0016021|GO:0055085 CDA09_17290 bd8430175af1ae0c813bad46b374443a 410 Pfam PF07690 Major Facilitator Superfamily 18 275 4.5E-28 T 01-11-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 CDA09_17290 bd8430175af1ae0c813bad46b374443a 410 SUPERFAMILY SSF103473 9 406 4.84E-74 T 01-11-2018 IPR036259 MFS transporter superfamily CDA09_17290 bd8430175af1ae0c813bad46b374443a 410 Gene3D G3DSA:1.20.1250.20 10 409 6.4E-70 T 01-11-2018 CDA09_15845 810783f4341408263a75e8fa64bd34de 260 SUPERFAMILY SSF56300 1 254 6.17E-50 T 01-11-2018 CDA09_15845 810783f4341408263a75e8fa64bd34de 260 Pfam PF00149 Calcineurin-like phosphoesterase 2 194 2.3E-12 T 01-11-2018 IPR004843 Calcineurin-like phosphoesterase domain, ApaH type GO:0016787 CDA09_15845 810783f4341408263a75e8fa64bd34de 260 Gene3D G3DSA:3.60.21.40 1 237 4.5E-76 T 01-11-2018 CDA09_15845 810783f4341408263a75e8fa64bd34de 260 Hamap MF_00905 3',5'-cyclic adenosine monophosphate phosphodiesterase CpdA [cpdA]. 1 251 35.182 T 01-11-2018 IPR026575 3,5-cyclic adenosine monophosphate phosphodiesterase CpdA GO:0004115 KEGG: 00230+3.1.4.53 CDA09_15845 810783f4341408263a75e8fa64bd34de 260 Gene3D G3DSA:3.30.750.180 102 228 4.5E-76 T 01-11-2018 CDA09_03975 7075786ab7e4096d12b90bc81e1a7c2e 236 Gene3D G3DSA:3.40.50.720 6 236 5.2E-69 T 01-11-2018 CDA09_03975 7075786ab7e4096d12b90bc81e1a7c2e 236 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 159 178 4.3E-30 T 01-11-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CDA09_03975 7075786ab7e4096d12b90bc81e1a7c2e 236 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 131 147 4.3E-30 T 01-11-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CDA09_03975 7075786ab7e4096d12b90bc81e1a7c2e 236 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 180 197 4.3E-30 T 01-11-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CDA09_03975 7075786ab7e4096d12b90bc81e1a7c2e 236 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 81 92 4.3E-30 T 01-11-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CDA09_03975 7075786ab7e4096d12b90bc81e1a7c2e 236 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 6 23 4.3E-30 T 01-11-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CDA09_03975 7075786ab7e4096d12b90bc81e1a7c2e 236 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 81 92 2.1E-11 T 01-11-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CDA09_03975 7075786ab7e4096d12b90bc81e1a7c2e 236 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 137 145 2.1E-11 T 01-11-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CDA09_03975 7075786ab7e4096d12b90bc81e1a7c2e 236 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 159 178 2.1E-11 T 01-11-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CDA09_03975 7075786ab7e4096d12b90bc81e1a7c2e 236 Pfam PF00106 short chain dehydrogenase 8 198 7.3E-45 T 01-11-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CDA09_03975 7075786ab7e4096d12b90bc81e1a7c2e 236 SUPERFAMILY SSF51735 8 228 3.06E-60 T 01-11-2018 IPR036291 NAD(P)-binding domain superfamily CDA09_21450 67c39f3a5e8d39d997e995e40f272a66 277 Gene3D G3DSA:3.40.50.720 1 277 5.2E-74 T 01-11-2018 CDA09_21450 67c39f3a5e8d39d997e995e40f272a66 277 TIGRFAM TIGR03325 BphB_TodD: cis-2,3-dihydrobiphenyl-2,3-diol dehydrogenase 1 263 2.7E-152 T 01-11-2018 IPR017711 Cis-2,3-dihydrobiphenyl-2,3-diol dehydrogenase GO:0016628|GO:0055114 CDA09_21450 67c39f3a5e8d39d997e995e40f272a66 277 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 142 170 - T 01-11-2018 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 CDA09_21450 67c39f3a5e8d39d997e995e40f272a66 277 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 218 238 3.9E-34 T 01-11-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CDA09_21450 67c39f3a5e8d39d997e995e40f272a66 277 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 78 89 3.9E-34 T 01-11-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CDA09_21450 67c39f3a5e8d39d997e995e40f272a66 277 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 129 145 3.9E-34 T 01-11-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CDA09_21450 67c39f3a5e8d39d997e995e40f272a66 277 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 7 24 3.9E-34 T 01-11-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CDA09_21450 67c39f3a5e8d39d997e995e40f272a66 277 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 175 192 3.9E-34 T 01-11-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CDA09_21450 67c39f3a5e8d39d997e995e40f272a66 277 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 155 174 3.9E-34 T 01-11-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CDA09_21450 67c39f3a5e8d39d997e995e40f272a66 277 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 78 89 5.0E-6 T 01-11-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CDA09_21450 67c39f3a5e8d39d997e995e40f272a66 277 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 136 144 5.0E-6 T 01-11-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CDA09_21450 67c39f3a5e8d39d997e995e40f272a66 277 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 155 174 5.0E-6 T 01-11-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CDA09_21450 67c39f3a5e8d39d997e995e40f272a66 277 SUPERFAMILY SSF51735 1 257 5.37E-58 T 01-11-2018 IPR036291 NAD(P)-binding domain superfamily CDA09_21450 67c39f3a5e8d39d997e995e40f272a66 277 Pfam PF00106 short chain dehydrogenase 6 194 2.8E-43 T 01-11-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CDA09_14470 ea09bfeb7a4cc5ca48d9330498072c79 349 Pfam PF00581 Rhodanese-like domain 16 125 7.7E-9 T 01-11-2018 IPR001763 Rhodanese-like domain CDA09_14470 ea09bfeb7a4cc5ca48d9330498072c79 349 SMART SM00450 3 130 1.4E-9 T 01-11-2018 IPR001763 Rhodanese-like domain CDA09_14470 ea09bfeb7a4cc5ca48d9330498072c79 349 SUPERFAMILY SSF52821 17 141 2.36E-22 T 01-11-2018 IPR036873 Rhodanese-like domain superfamily CDA09_14470 ea09bfeb7a4cc5ca48d9330498072c79 349 TIGRFAM TIGR03167 tRNA_sel_U_synt: tRNA 2-selenouridine synthase 14 320 9.7E-112 T 01-11-2018 IPR017582 tRNA 2-selenouridine/geranyl-2-thiouridine synthase GO:0016785|GO:0043828|GO:0070329 CDA09_14470 ea09bfeb7a4cc5ca48d9330498072c79 349 Gene3D G3DSA:3.40.250.10 8 131 1.5E-38 T 01-11-2018 IPR036873 Rhodanese-like domain superfamily CDA09_02630 434edb2437f6720cf6f84715643a10fe 654 ProSitePatterns PS00430 TonB-dependent receptor proteins signature 1. 1 41 - T 01-11-2018 IPR010916 TonB box, conserved site CDA09_02630 434edb2437f6720cf6f84715643a10fe 654 SUPERFAMILY SSF56935 29 654 1.05E-88 T 01-11-2018 CDA09_02630 434edb2437f6720cf6f84715643a10fe 654 Gene3D G3DSA:2.40.170.20 169 654 9.3E-52 T 01-11-2018 IPR036942 TonB-dependent receptor-like, beta-barrel domain superfamily CDA09_02630 434edb2437f6720cf6f84715643a10fe 654 Gene3D G3DSA:2.170.130.10 29 162 4.9E-25 T 01-11-2018 IPR037066 TonB-dependent receptor, plug domain superfamily CDA09_02630 434edb2437f6720cf6f84715643a10fe 654 Pfam PF00593 TonB dependent receptor 206 652 1.6E-36 T 01-11-2018 IPR000531 TonB-dependent receptor-like, beta-barrel CDA09_02630 434edb2437f6720cf6f84715643a10fe 654 Pfam PF07715 TonB-dependent Receptor Plug Domain 49 156 3.2E-19 T 01-11-2018 IPR012910 TonB-dependent receptor, plug domain CDA09_18870 1033fb64e56cbafb11bce56ea6e36a5d 311 Gene3D G3DSA:3.40.50.1980 182 308 8.0E-46 T 01-11-2018 CDA09_18870 1033fb64e56cbafb11bce56ea6e36a5d 311 PRINTS PR00691 Adhesin B signature 242 259 5.3E-28 T 01-11-2018 IPR006129 Adhesin B GO:0007155 CDA09_18870 1033fb64e56cbafb11bce56ea6e36a5d 311 PRINTS PR00691 Adhesin B signature 264 282 5.3E-28 T 01-11-2018 IPR006129 Adhesin B GO:0007155 CDA09_18870 1033fb64e56cbafb11bce56ea6e36a5d 311 PRINTS PR00691 Adhesin B signature 27 48 5.3E-28 T 01-11-2018 IPR006129 Adhesin B GO:0007155 CDA09_18870 1033fb64e56cbafb11bce56ea6e36a5d 311 PRINTS PR00691 Adhesin B signature 193 210 5.3E-28 T 01-11-2018 IPR006129 Adhesin B GO:0007155 CDA09_18870 1033fb64e56cbafb11bce56ea6e36a5d 311 PRINTS PR00691 Adhesin B signature 71 90 5.3E-28 T 01-11-2018 IPR006129 Adhesin B GO:0007155 CDA09_18870 1033fb64e56cbafb11bce56ea6e36a5d 311 PRINTS PR00691 Adhesin B signature 135 154 5.3E-28 T 01-11-2018 IPR006129 Adhesin B GO:0007155 CDA09_18870 1033fb64e56cbafb11bce56ea6e36a5d 311 PRINTS PR00691 Adhesin B signature 285 303 5.3E-28 T 01-11-2018 IPR006129 Adhesin B GO:0007155 CDA09_18870 1033fb64e56cbafb11bce56ea6e36a5d 311 PRINTS PR00691 Adhesin B signature 52 70 5.3E-28 T 01-11-2018 IPR006129 Adhesin B GO:0007155 CDA09_18870 1033fb64e56cbafb11bce56ea6e36a5d 311 Gene3D G3DSA:3.40.50.1980 28 179 2.9E-49 T 01-11-2018 CDA09_18870 1033fb64e56cbafb11bce56ea6e36a5d 311 PRINTS PR00690 Adhesin family signature 246 264 1.2E-26 T 01-11-2018 IPR006128 Adhesion lipoprotein GO:0007155 CDA09_18870 1033fb64e56cbafb11bce56ea6e36a5d 311 PRINTS PR00690 Adhesin family signature 193 214 1.2E-26 T 01-11-2018 IPR006128 Adhesion lipoprotein GO:0007155 CDA09_18870 1033fb64e56cbafb11bce56ea6e36a5d 311 PRINTS PR00690 Adhesin family signature 27 45 1.2E-26 T 01-11-2018 IPR006128 Adhesion lipoprotein GO:0007155 CDA09_18870 1033fb64e56cbafb11bce56ea6e36a5d 311 PRINTS PR00690 Adhesin family signature 71 88 1.2E-26 T 01-11-2018 IPR006128 Adhesion lipoprotein GO:0007155 CDA09_18870 1033fb64e56cbafb11bce56ea6e36a5d 311 PRINTS PR00690 Adhesin family signature 272 291 1.2E-26 T 01-11-2018 IPR006128 Adhesion lipoprotein GO:0007155 CDA09_18870 1033fb64e56cbafb11bce56ea6e36a5d 311 PRINTS PR00690 Adhesin family signature 58 71 1.2E-26 T 01-11-2018 IPR006128 Adhesion lipoprotein GO:0007155 CDA09_18870 1033fb64e56cbafb11bce56ea6e36a5d 311 Pfam PF01297 Zinc-uptake complex component A periplasmic 30 302 5.3E-82 T 01-11-2018 IPR006127 Periplasmic solute binding protein, ZnuA-like GO:0030001|GO:0046872 CDA09_18870 1033fb64e56cbafb11bce56ea6e36a5d 311 SUPERFAMILY SSF53807 21 307 6.38E-89 T 01-11-2018 CDA09_22510 80ba7f2ca4128d34b1c01f17a5deb123 435 SUPERFAMILY SSF111369 60 114 1.28E-7 T 01-11-2018 CDA09_22510 80ba7f2ca4128d34b1c01f17a5deb123 435 SUPERFAMILY SSF111369 180 282 1.96E-7 T 01-11-2018 CDA09_22510 80ba7f2ca4128d34b1c01f17a5deb123 435 Pfam PF13533 Biotin-lipoyl like 61 109 2.1E-11 T 01-11-2018 IPR039562 Membrane fusion protein, biotin-lipoyl like domain CDA09_22510 80ba7f2ca4128d34b1c01f17a5deb123 435 Gene3D G3DSA:2.40.30.170 246 366 4.2E-33 T 01-11-2018 CDA09_22510 80ba7f2ca4128d34b1c01f17a5deb123 435 Pfam PF13437 HlyD family secretion protein 233 350 8.3E-14 T 01-11-2018 CDA09_22510 80ba7f2ca4128d34b1c01f17a5deb123 435 Gene3D G3DSA:1.10.287.470 95 113 6.4E-10 T 01-11-2018 CDA09_22510 80ba7f2ca4128d34b1c01f17a5deb123 435 Gene3D G3DSA:2.40.50.100 61 94 6.4E-10 T 01-11-2018 CDA09_22510 80ba7f2ca4128d34b1c01f17a5deb123 435 Gene3D G3DSA:1.10.287.470 119 203 5.8E-7 T 01-11-2018 CDA09_17980 2299d8c0ae01339dcd092f4de6913e73 225 TIGRFAM TIGR01509 HAD-SF-IA-v3: HAD hydrolase, family IA, variant 3 80 193 1.0E-11 T 01-11-2018 IPR006439 HAD hydrolase, subfamily IA GO:0016787 CDA09_17980 2299d8c0ae01339dcd092f4de6913e73 225 TIGRFAM TIGR01549 HAD-SF-IA-v1: HAD hydrolase, family IA, variant 1 98 187 6.9E-10 T 01-11-2018 IPR006439 HAD hydrolase, subfamily IA GO:0016787 CDA09_17980 2299d8c0ae01339dcd092f4de6913e73 225 TIGRFAM TIGR01449 PGP_bact: phosphoglycolate phosphatase, bacterial 11 213 1.3E-64 T 01-11-2018 IPR006346 2-phosphoglycolate phosphatase-like, prokaryotic GO:0016791 KEGG: 00630+3.1.3.18|MetaCyc: PWY-181 CDA09_17980 2299d8c0ae01339dcd092f4de6913e73 225 SUPERFAMILY SSF56784 8 196 2.13E-56 T 01-11-2018 IPR036412 HAD-like superfamily CDA09_17980 2299d8c0ae01339dcd092f4de6913e73 225 Hamap MF_00495 Phosphoglycolate phosphatase [gph]. 8 223 35.707 T 01-11-2018 IPR037512 Phosphoglycolate phosphatase, prokaryotic GO:0005975|GO:0008967 KEGG: 00630+3.1.3.18|MetaCyc: PWY-181 CDA09_17980 2299d8c0ae01339dcd092f4de6913e73 225 Gene3D G3DSA:1.10.150.240 23 92 2.7E-60 T 01-11-2018 IPR023198 Phosphoglycolate phosphatase-like, domain 2 CDA09_17980 2299d8c0ae01339dcd092f4de6913e73 225 Gene3D G3DSA:3.40.50.1000 11 205 2.7E-60 T 01-11-2018 IPR023214 HAD superfamily CDA09_17980 2299d8c0ae01339dcd092f4de6913e73 225 Pfam PF13419 Haloacid dehalogenase-like hydrolase 11 193 1.1E-34 T 01-11-2018 CDA09_10840 09585efb2e94393e579662785355b431 271 Pfam PF06629 MltA-interacting protein MipA 45 271 3.2E-27 T 01-11-2018 IPR010583 MltA-interacting MipA CDA09_18510 1c670a29936b60ad612eef677482d6f0 215 Pfam PF16859 Bacterial transcriptional repressor C-terminal 92 178 1.8E-10 T 01-11-2018 IPR011075 Tetracycline transcriptional regulator, TetR-related, C-terminal CDA09_18510 1c670a29936b60ad612eef677482d6f0 215 Gene3D G3DSA:1.10.10.60 1 62 3.5E-24 T 01-11-2018 CDA09_18510 1c670a29936b60ad612eef677482d6f0 215 SUPERFAMILY SSF46689 7 92 8.98E-23 T 01-11-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 CDA09_18510 1c670a29936b60ad612eef677482d6f0 215 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 41 64 4.8E-12 T 01-11-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 CDA09_18510 1c670a29936b60ad612eef677482d6f0 215 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 20 33 4.8E-12 T 01-11-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 CDA09_18510 1c670a29936b60ad612eef677482d6f0 215 SUPERFAMILY SSF48498 87 207 3.34E-19 T 01-11-2018 IPR036271 Tetracyclin repressor-like, C-terminal domain superfamily CDA09_18510 1c670a29936b60ad612eef677482d6f0 215 Pfam PF00440 Bacterial regulatory proteins, tetR family 21 66 1.0E-19 T 01-11-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 CDA09_18510 1c670a29936b60ad612eef677482d6f0 215 Gene3D G3DSA:1.10.357.10 63 210 3.1E-21 T 01-11-2018 CDA09_12875 740b261c17bb0541bb39f6c60713b8c4 1152 Pfam PF03461 TRCF domain 1015 1108 4.6E-27 T 01-11-2018 IPR005118 Transcription-repair-coupling factor, C-terminal domain GO:0006281 CDA09_12875 740b261c17bb0541bb39f6c60713b8c4 1152 SUPERFAMILY SSF52540 356 471 5.84E-22 T 01-11-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CDA09_12875 740b261c17bb0541bb39f6c60713b8c4 1152 SUPERFAMILY SSF141259 479 554 3.01E-24 T 01-11-2018 IPR036101 CarD-like/TRCF domain superfamily CDA09_12875 740b261c17bb0541bb39f6c60713b8c4 1152 Gene3D G3DSA:3.90.1150.50 1011 1152 1.9E-38 T 01-11-2018 IPR037235 TRCF-like, C-terminal domain CDA09_12875 740b261c17bb0541bb39f6c60713b8c4 1152 SMART SM00982 1014 1114 1.6E-47 T 01-11-2018 IPR005118 Transcription-repair-coupling factor, C-terminal domain GO:0006281 CDA09_12875 740b261c17bb0541bb39f6c60713b8c4 1152 Gene3D G3DSA:3.40.50.11140 357 458 4.5E-10 T 01-11-2018 CDA09_12875 740b261c17bb0541bb39f6c60713b8c4 1152 Gene3D G3DSA:2.30.30.840 489 547 9.2E-230 T 01-11-2018 CDA09_12875 740b261c17bb0541bb39f6c60713b8c4 1152 SUPERFAMILY SSF52540 22 350 5.49E-98 T 01-11-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CDA09_12875 740b261c17bb0541bb39f6c60713b8c4 1152 Pfam PF00270 DEAD/DEAH box helicase 611 768 5.0E-19 T 01-11-2018 IPR011545 DEAD/DEAH box helicase domain GO:0003676|GO:0005524 CDA09_12875 740b261c17bb0541bb39f6c60713b8c4 1152 Gene3D G3DSA:3.30.2060.10 135 220 4.2E-113 T 01-11-2018 CDA09_12875 740b261c17bb0541bb39f6c60713b8c4 1152 SMART SM01058 485 582 8.8E-49 T 01-11-2018 IPR003711 CarD-like/TRCF domain CDA09_12875 740b261c17bb0541bb39f6c60713b8c4 1152 Hamap MF_00969 Transcription-repair-coupling factor [mfd]. 39 1115 27.33 T 01-11-2018 IPR004576 Transcription-repair coupling factor GO:0003684|GO:0005524|GO:0006281 CDA09_12875 740b261c17bb0541bb39f6c60713b8c4 1152 SUPERFAMILY SSF52540 789 996 1.7E-47 T 01-11-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CDA09_12875 740b261c17bb0541bb39f6c60713b8c4 1152 Gene3D G3DSA:3.40.50.300 484 995 9.2E-230 T 01-11-2018 CDA09_12875 740b261c17bb0541bb39f6c60713b8c4 1152 Gene3D G3DSA:3.40.50.300 548 787 9.2E-230 T 01-11-2018 CDA09_12875 740b261c17bb0541bb39f6c60713b8c4 1152 SUPERFAMILY SSF52540 529 789 4.37E-61 T 01-11-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CDA09_12875 740b261c17bb0541bb39f6c60713b8c4 1152 Pfam PF00271 Helicase conserved C-terminal domain 813 915 4.9E-16 T 01-11-2018 IPR001650 Helicase, C-terminal CDA09_12875 740b261c17bb0541bb39f6c60713b8c4 1152 Pfam PF02559 CarD-like/TRCF domain 486 581 3.6E-27 T 01-11-2018 IPR003711 CarD-like/TRCF domain CDA09_12875 740b261c17bb0541bb39f6c60713b8c4 1152 Gene3D G3DSA:3.40.50.11180 31 338 4.2E-113 T 01-11-2018 CDA09_12875 740b261c17bb0541bb39f6c60713b8c4 1152 SUPERFAMILY SSF143517 1000 1149 2.75E-38 T 01-11-2018 IPR037235 TRCF-like, C-terminal domain CDA09_12875 740b261c17bb0541bb39f6c60713b8c4 1152 TIGRFAM TIGR00580 mfd: transcription-repair coupling factor 155 1087 0.0 T 01-11-2018 IPR004576 Transcription-repair coupling factor GO:0003684|GO:0005524|GO:0006281 CDA09_12875 740b261c17bb0541bb39f6c60713b8c4 1152 SMART SM00490 832 916 3.4E-17 T 01-11-2018 IPR001650 Helicase, C-terminal CDA09_12875 740b261c17bb0541bb39f6c60713b8c4 1152 SMART SM00487 606 796 1.0E-35 T 01-11-2018 IPR014001 Helicase superfamily 1/2, ATP-binding domain CDA09_03050 7223fb52f0d569f7524fe08870da22db 485 Gene3D G3DSA:3.40.50.300 1 213 1.8E-81 T 01-11-2018 CDA09_03050 7223fb52f0d569f7524fe08870da22db 485 SMART SM00490 261 342 2.5E-31 T 01-11-2018 IPR001650 Helicase, C-terminal CDA09_03050 7223fb52f0d569f7524fe08870da22db 485 SUPERFAMILY SSF52540 77 362 6.54E-75 T 01-11-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CDA09_03050 7223fb52f0d569f7524fe08870da22db 485 Pfam PF00271 Helicase conserved C-terminal domain 235 342 1.5E-27 T 01-11-2018 IPR001650 Helicase, C-terminal CDA09_03050 7223fb52f0d569f7524fe08870da22db 485 Gene3D G3DSA:3.40.50.300 218 399 1.2E-48 T 01-11-2018 CDA09_03050 7223fb52f0d569f7524fe08870da22db 485 ProSitePatterns PS00039 DEAD-box subfamily ATP-dependent helicases signature. 156 164 - T 01-11-2018 IPR000629 ATP-dependent RNA helicase DEAD-box, conserved site CDA09_03050 7223fb52f0d569f7524fe08870da22db 485 Pfam PF00270 DEAD/DEAH box helicase 25 199 2.3E-53 T 01-11-2018 IPR011545 DEAD/DEAH box helicase domain GO:0003676|GO:0005524 CDA09_03050 7223fb52f0d569f7524fe08870da22db 485 SMART SM00487 20 225 1.4E-64 T 01-11-2018 IPR014001 Helicase superfamily 1/2, ATP-binding domain CDA09_00880 8b171ebcaa50af25bf74790f5b3608cb 285 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 95 258 3.4E-14 T 01-11-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 CDA09_00880 8b171ebcaa50af25bf74790f5b3608cb 285 SUPERFAMILY SSF161098 6 261 1.83E-48 T 01-11-2018 IPR035906 MetI-like superfamily CDA09_00880 8b171ebcaa50af25bf74790f5b3608cb 285 Gene3D G3DSA:1.10.3720.10 8 268 1.3E-45 T 01-11-2018 IPR035906 MetI-like superfamily CDA09_13395 d3281b78f89ea3695e6582b8ba0bf08c 266 Gene3D G3DSA:3.20.20.370 61 266 3.6E-45 T 01-11-2018 CDA09_13395 d3281b78f89ea3695e6582b8ba0bf08c 266 Pfam PF01522 Polysaccharide deacetylase 74 190 1.5E-25 T 01-11-2018 IPR002509 NodB homology domain GO:0005975|GO:0016810 CDA09_13395 d3281b78f89ea3695e6582b8ba0bf08c 266 SUPERFAMILY SSF88713 53 263 1.33E-48 T 01-11-2018 IPR011330 Glycoside hydrolase/deacetylase, beta/alpha-barrel GO:0003824|GO:0005975 CDA09_15485 e43498bb212c05dca954668a82449c5e 417 SUPERFAMILY SSF52518 19 273 9.22E-58 T 01-11-2018 IPR029061 Thiamin diphosphate-binding fold CDA09_15485 e43498bb212c05dca954668a82449c5e 417 SUPERFAMILY SSF52922 277 396 7.14E-30 T 01-11-2018 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II GO:0003824 CDA09_15485 e43498bb212c05dca954668a82449c5e 417 Gene3D G3DSA:3.40.50.970 18 275 4.4E-84 T 01-11-2018 CDA09_15485 e43498bb212c05dca954668a82449c5e 417 Gene3D G3DSA:3.40.50.920 276 415 3.2E-35 T 01-11-2018 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II GO:0003824 CDA09_15485 e43498bb212c05dca954668a82449c5e 417 Pfam PF01855 Pyruvate flavodoxin/ferredoxin oxidoreductase, thiamine diP-bdg 33 234 2.6E-51 T 01-11-2018 IPR002880 Pyruvate flavodoxin/ferredoxin oxidoreductase, N-terminal GO:0016491|GO:0055114 CDA09_15485 e43498bb212c05dca954668a82449c5e 417 Pfam PF17147 Pyruvate:ferredoxin oxidoreductase core domain II 286 389 5.3E-24 T 01-11-2018 IPR033412 Pyruvate:ferredoxin oxidoreductase, core domain II CDA09_07390 0ce7c4a6b23364528e209698053f2f00 563 Pfam PF13188 PAS domain 202 238 5.3E-4 T 01-11-2018 IPR000014 PAS domain CDA09_07390 0ce7c4a6b23364528e209698053f2f00 563 SMART SM00091 393 463 150.0 T 01-11-2018 IPR000014 PAS domain CDA09_07390 0ce7c4a6b23364528e209698053f2f00 563 SMART SM00091 40 104 13.0 T 01-11-2018 IPR000014 PAS domain CDA09_07390 0ce7c4a6b23364528e209698053f2f00 563 SMART SM00091 202 272 3.7 T 01-11-2018 IPR000014 PAS domain CDA09_07390 0ce7c4a6b23364528e209698053f2f00 563 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 457 562 2.0E-14 T 01-11-2018 IPR003594 Histidine kinase/HSP90-like ATPase CDA09_07390 0ce7c4a6b23364528e209698053f2f00 563 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 199 325 2.3E-11 T 01-11-2018 IPR000014 PAS domain CDA09_07390 0ce7c4a6b23364528e209698053f2f00 563 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 40 158 1.6E-14 T 01-11-2018 IPR000014 PAS domain CDA09_07390 0ce7c4a6b23364528e209698053f2f00 563 Gene3D G3DSA:3.30.450.20 36 154 2.8E-24 T 01-11-2018 CDA09_07390 0ce7c4a6b23364528e209698053f2f00 563 SMART SM00086 279 320 4.9 T 01-11-2018 IPR001610 PAC motif CDA09_07390 0ce7c4a6b23364528e209698053f2f00 563 SMART SM00086 110 151 0.34 T 01-11-2018 IPR001610 PAC motif CDA09_07390 0ce7c4a6b23364528e209698053f2f00 563 PRINTS PR00344 Bacterial sensor protein C-terminal signature 525 543 6.9E-14 T 01-11-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 CDA09_07390 0ce7c4a6b23364528e209698053f2f00 563 PRINTS PR00344 Bacterial sensor protein C-terminal signature 496 510 6.9E-14 T 01-11-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 CDA09_07390 0ce7c4a6b23364528e209698053f2f00 563 PRINTS PR00344 Bacterial sensor protein C-terminal signature 549 562 6.9E-14 T 01-11-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 CDA09_07390 0ce7c4a6b23364528e209698053f2f00 563 PRINTS PR00344 Bacterial sensor protein C-terminal signature 514 524 6.9E-14 T 01-11-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 CDA09_07390 0ce7c4a6b23364528e209698053f2f00 563 Pfam PF13426 PAS domain 58 150 1.0E-6 T 01-11-2018 IPR000014 PAS domain CDA09_07390 0ce7c4a6b23364528e209698053f2f00 563 SUPERFAMILY SSF55785 56 159 2.69E-17 T 01-11-2018 IPR035965 PAS domain superfamily CDA09_07390 0ce7c4a6b23364528e209698053f2f00 563 Gene3D G3DSA:1.10.287.130 347 408 5.0E-7 T 01-11-2018 CDA09_07390 0ce7c4a6b23364528e209698053f2f00 563 Gene3D G3DSA:3.30.450.20 189 325 4.1E-16 T 01-11-2018 CDA09_07390 0ce7c4a6b23364528e209698053f2f00 563 Gene3D G3DSA:3.30.565.10 410 563 1.3E-32 T 01-11-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily CDA09_07390 0ce7c4a6b23364528e209698053f2f00 563 SMART SM00387 453 563 3.1E-20 T 01-11-2018 IPR003594 Histidine kinase/HSP90-like ATPase CDA09_07390 0ce7c4a6b23364528e209698053f2f00 563 SUPERFAMILY SSF55785 189 318 2.79E-14 T 01-11-2018 IPR035965 PAS domain superfamily CDA09_07390 0ce7c4a6b23364528e209698053f2f00 563 SUPERFAMILY SSF55874 414 562 1.7E-30 T 01-11-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily CDA09_13680 3a8af453a6433d14f961e88469f42a0a 282 Gene3D G3DSA:3.30.450.20 161 281 4.0E-14 T 01-11-2018 CDA09_13680 3a8af453a6433d14f961e88469f42a0a 282 Pfam PF17200 Single Cache domain 2 167 264 6.8E-11 T 01-11-2018 IPR033480 Single Cache domain 2 CDA09_13680 3a8af453a6433d14f961e88469f42a0a 282 Pfam PF17200 Single Cache domain 2 66 142 3.8E-13 T 01-11-2018 IPR033480 Single Cache domain 2 CDA09_13680 3a8af453a6433d14f961e88469f42a0a 282 Gene3D G3DSA:3.30.450.20 18 160 9.0E-16 T 01-11-2018 CDA09_13680 3a8af453a6433d14f961e88469f42a0a 282 SMART SM01049 34 106 0.056 T 01-11-2018 IPR033480 Single Cache domain 2 CDA09_13680 3a8af453a6433d14f961e88469f42a0a 282 SMART SM01049 155 234 1.6E-4 T 01-11-2018 IPR033480 Single Cache domain 2 CDA09_17470 88092480f1fde07c04e252f2e59f4efa 638 SUPERFAMILY SSF55681 242 525 2.58E-95 T 01-11-2018 CDA09_17470 88092480f1fde07c04e252f2e59f4efa 638 Pfam PF07973 Threonyl and Alanyl tRNA synthetase second additional domain 169 218 1.4E-16 T 01-11-2018 IPR012947 Threonyl/alanyl tRNA synthetase, SAD GO:0004812|GO:0005524|GO:0043039 CDA09_17470 88092480f1fde07c04e252f2e59f4efa 638 SUPERFAMILY SSF55186 64 240 1.18E-68 T 01-11-2018 IPR018163 Threonyl/alanyl tRNA synthetase, class II-like, putative editing domain superfamily GO:0000166 CDA09_17470 88092480f1fde07c04e252f2e59f4efa 638 Pfam PF02824 TGS domain 4 61 1.3E-12 T 01-11-2018 IPR004095 TGS KEGG: 00970+6.1.1.3 CDA09_17470 88092480f1fde07c04e252f2e59f4efa 638 Gene3D G3DSA:3.10.20.30 3 63 1.8E-23 T 01-11-2018 IPR012675 Beta-grasp domain superfamily CDA09_17470 88092480f1fde07c04e252f2e59f4efa 638 SMART SM00863 169 218 2.1E-26 T 01-11-2018 IPR012947 Threonyl/alanyl tRNA synthetase, SAD GO:0004812|GO:0005524|GO:0043039 CDA09_17470 88092480f1fde07c04e252f2e59f4efa 638 Pfam PF00587 tRNA synthetase class II core domain (G, H, P, S and T) 320 527 2.1E-44 T 01-11-2018 IPR002314 Aminoacyl-tRNA synthetase, class II (G/ P/ S/T) GO:0000166|GO:0004812|GO:0005524|GO:0006418 CDA09_17470 88092480f1fde07c04e252f2e59f4efa 638 Hamap MF_00184 Threonine--tRNA ligase [thrS]. 66 633 34.112 T 01-11-2018 IPR002320 Threonine-tRNA ligase, class IIa GO:0004829|GO:0005524|GO:0005737|GO:0006435 KEGG: 00970+6.1.1.3 CDA09_17470 88092480f1fde07c04e252f2e59f4efa 638 SUPERFAMILY SSF52954 529 634 9.51E-29 T 01-11-2018 CDA09_17470 88092480f1fde07c04e252f2e59f4efa 638 Gene3D G3DSA:3.30.980.10 69 221 6.0E-65 T 01-11-2018 CDA09_17470 88092480f1fde07c04e252f2e59f4efa 638 SUPERFAMILY SSF81271 3 61 2.18E-16 T 01-11-2018 IPR012676 TGS-like KEGG: 00970+6.1.1.3 CDA09_17470 88092480f1fde07c04e252f2e59f4efa 638 PRINTS PR01047 Threonyl-tRNA synthetase signature 361 384 6.4E-53 T 01-11-2018 IPR002320 Threonine-tRNA ligase, class IIa GO:0004829|GO:0005524|GO:0005737|GO:0006435 KEGG: 00970+6.1.1.3 CDA09_17470 88092480f1fde07c04e252f2e59f4efa 638 PRINTS PR01047 Threonyl-tRNA synthetase signature 533 545 6.4E-53 T 01-11-2018 IPR002320 Threonine-tRNA ligase, class IIa GO:0004829|GO:0005524|GO:0005737|GO:0006435 KEGG: 00970+6.1.1.3 CDA09_17470 88092480f1fde07c04e252f2e59f4efa 638 PRINTS PR01047 Threonyl-tRNA synthetase signature 328 356 6.4E-53 T 01-11-2018 IPR002320 Threonine-tRNA ligase, class IIa GO:0004829|GO:0005524|GO:0005737|GO:0006435 KEGG: 00970+6.1.1.3 CDA09_17470 88092480f1fde07c04e252f2e59f4efa 638 PRINTS PR01047 Threonyl-tRNA synthetase signature 506 519 6.4E-53 T 01-11-2018 IPR002320 Threonine-tRNA ligase, class IIa GO:0004829|GO:0005524|GO:0005737|GO:0006435 KEGG: 00970+6.1.1.3 CDA09_17470 88092480f1fde07c04e252f2e59f4efa 638 PRINTS PR01047 Threonyl-tRNA synthetase signature 463 491 6.4E-53 T 01-11-2018 IPR002320 Threonine-tRNA ligase, class IIa GO:0004829|GO:0005524|GO:0005737|GO:0006435 KEGG: 00970+6.1.1.3 CDA09_17470 88092480f1fde07c04e252f2e59f4efa 638 Gene3D G3DSA:3.40.50.800 531 637 1.0E-30 T 01-11-2018 IPR036621 Anticodon-binding domain superfamily CDA09_17470 88092480f1fde07c04e252f2e59f4efa 638 TIGRFAM TIGR00418 thrS: threonine--tRNA ligase 72 630 9.7E-221 T 01-11-2018 IPR002320 Threonine-tRNA ligase, class IIa GO:0004829|GO:0005524|GO:0005737|GO:0006435 KEGG: 00970+6.1.1.3 CDA09_17470 88092480f1fde07c04e252f2e59f4efa 638 Pfam PF03129 Anticodon binding domain 540 626 1.3E-18 T 01-11-2018 IPR004154 Anticodon-binding CDA09_17470 88092480f1fde07c04e252f2e59f4efa 638 Gene3D G3DSA:3.30.54.20 130 186 6.0E-65 T 01-11-2018 CDA09_17470 88092480f1fde07c04e252f2e59f4efa 638 Gene3D G3DSA:3.30.930.10 222 530 8.7E-125 T 01-11-2018 CDA09_16690 9f9fea6f3c64eced21eb4593fc37336f 199 SMART SM00900 96 188 8.4E-32 T 01-11-2018 IPR007329 FMN-binding GO:0010181|GO:0016020 CDA09_16690 9f9fea6f3c64eced21eb4593fc37336f 199 Pfam PF04205 FMN-binding domain 96 182 2.1E-17 T 01-11-2018 IPR007329 FMN-binding GO:0010181|GO:0016020 CDA09_16690 9f9fea6f3c64eced21eb4593fc37336f 199 PIRSF PIRSF006091 1 199 1.5E-71 T 01-11-2018 IPR010209 Ion-translocating oxidoreductase complex, subunit RnfG/RsxG GO:0005886|GO:0009055|GO:0022900 CDA09_16690 9f9fea6f3c64eced21eb4593fc37336f 199 Hamap MF_00479 Ion-translocating oxidoreductase complex subunit G [rsxG]. 2 190 24.198 T 01-11-2018 IPR010209 Ion-translocating oxidoreductase complex, subunit RnfG/RsxG GO:0005886|GO:0009055|GO:0022900 CDA09_16690 9f9fea6f3c64eced21eb4593fc37336f 199 TIGRFAM TIGR01947 rnfG: electron transport complex, RnfABCDGE type, G subunit 10 189 3.6E-55 T 01-11-2018 IPR010209 Ion-translocating oxidoreductase complex, subunit RnfG/RsxG GO:0005886|GO:0009055|GO:0022900 CDA09_03180 2e48de733268d81363b8de1c78aa71e1 960 Gene3D G3DSA:3.90.1150.10 766 904 5.8E-42 T 01-11-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 CDA09_03180 2e48de733268d81363b8de1c78aa71e1 960 Hamap MF_00711 Glycine dehydrogenase (decarboxylating) [gcvP]. 15 957 25.973 T 01-11-2018 IPR003437 Glycine dehydrogenase (decarboxylating) GO:0004375|GO:0006544|GO:0055114 KEGG: 00260+1.4.4.2|Reactome: R-HSA-6783984 CDA09_03180 2e48de733268d81363b8de1c78aa71e1 960 Gene3D G3DSA:3.40.640.10 103 361 8.1E-107 T 01-11-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 CDA09_03180 2e48de733268d81363b8de1c78aa71e1 960 Gene3D G3DSA:3.40.640.10 531 752 6.6E-61 T 01-11-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 CDA09_03180 2e48de733268d81363b8de1c78aa71e1 960 Pfam PF02347 Glycine cleavage system P-protein 24 446 8.5E-188 T 01-11-2018 IPR020581 Glycine cleavage system P protein GO:0004375|GO:0006546|GO:0055114 KEGG: 00260+1.4.4.2|Reactome: R-HSA-6783984 CDA09_03180 2e48de733268d81363b8de1c78aa71e1 960 Pfam PF02347 Glycine cleavage system P-protein 482 739 5.2E-10 T 01-11-2018 IPR020581 Glycine cleavage system P protein GO:0004375|GO:0006546|GO:0055114 KEGG: 00260+1.4.4.2|Reactome: R-HSA-6783984 CDA09_03180 2e48de733268d81363b8de1c78aa71e1 960 SUPERFAMILY SSF53383 24 447 5.81E-107 T 01-11-2018 IPR015424 Pyridoxal phosphate-dependent transferase CDA09_03180 2e48de733268d81363b8de1c78aa71e1 960 TIGRFAM TIGR00461 gcvP: glycine dehydrogenase 24 951 0.0 T 01-11-2018 IPR003437 Glycine dehydrogenase (decarboxylating) GO:0004375|GO:0006544|GO:0055114 KEGG: 00260+1.4.4.2|Reactome: R-HSA-6783984 CDA09_03180 2e48de733268d81363b8de1c78aa71e1 960 SUPERFAMILY SSF53383 486 953 6.19E-102 T 01-11-2018 IPR015424 Pyridoxal phosphate-dependent transferase CDA09_09190 127aafc380f8e02d9b541898ae50cedd 297 Pfam PF01144 Coenzyme A transferase 10 226 3.4E-27 T 01-11-2018 IPR004165 Coenzyme A transferase family I GO:0008410 Reactome: R-HSA-77108 CDA09_09190 127aafc380f8e02d9b541898ae50cedd 297 Gene3D G3DSA:3.40.1080.10 6 128 2.0E-25 T 01-11-2018 CDA09_09190 127aafc380f8e02d9b541898ae50cedd 297 Gene3D G3DSA:3.40.1080.10 142 296 1.3E-50 T 01-11-2018 CDA09_09190 127aafc380f8e02d9b541898ae50cedd 297 SUPERFAMILY SSF100950 6 281 3.17E-66 T 01-11-2018 IPR037171 NagB/RpiA transferase-like CDA09_09190 127aafc380f8e02d9b541898ae50cedd 297 SMART SM00882 8 227 5.1E-27 T 01-11-2018 IPR004165 Coenzyme A transferase family I GO:0008410 Reactome: R-HSA-77108 CDA09_11295 58e7b230aa779b30731a2059cc058a4a 340 SUPERFAMILY SSF53383 10 334 1.55E-53 T 01-11-2018 IPR015424 Pyridoxal phosphate-dependent transferase CDA09_11295 58e7b230aa779b30731a2059cc058a4a 340 Gene3D G3DSA:3.90.1150.10 30 310 5.8E-48 T 01-11-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 CDA09_11295 58e7b230aa779b30731a2059cc058a4a 340 ProSitePatterns PS00105 Aminotransferases class-I pyridoxal-phosphate attachment site. 201 214 - T 01-11-2018 IPR004838 Aminotransferases, class-I, pyridoxal-phosphate-binding site GO:0003824|GO:0009058|GO:0030170 CDA09_11295 58e7b230aa779b30731a2059cc058a4a 340 TIGRFAM TIGR01140 L_thr_O3P_dcar: threonine-phosphate decarboxylase 12 333 3.0E-99 T 01-11-2018 IPR005860 L-threonine-O-3-phosphate decarboxylase GO:0003824|GO:0009236 KEGG: 00860+4.1.1.81|MetaCyc: PWY-5443 CDA09_11295 58e7b230aa779b30731a2059cc058a4a 340 Pfam PF00155 Aminotransferase class I and II 62 275 2.9E-25 T 01-11-2018 IPR004839 Aminotransferase, class I/classII GO:0009058|GO:0030170 CDA09_11295 58e7b230aa779b30731a2059cc058a4a 340 Gene3D G3DSA:3.40.640.10 42 249 5.8E-48 T 01-11-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 CDA09_20285 5faa489f7da0b679a7e1c8ca68991b1b 608 Pfam PF13522 Glutamine amidotransferase domain 62 191 5.2E-21 T 01-11-2018 CDA09_20285 5faa489f7da0b679a7e1c8ca68991b1b 608 Pfam PF01380 SIS domain 462 590 1.0E-24 T 01-11-2018 IPR001347 Sugar isomerase (SIS) GO:0097367|GO:1901135 CDA09_20285 5faa489f7da0b679a7e1c8ca68991b1b 608 Pfam PF01380 SIS domain 292 415 2.4E-32 T 01-11-2018 IPR001347 Sugar isomerase (SIS) GO:0097367|GO:1901135 CDA09_20285 5faa489f7da0b679a7e1c8ca68991b1b 608 Gene3D G3DSA:3.40.50.10490 446 593 2.6E-140 T 01-11-2018 CDA09_20285 5faa489f7da0b679a7e1c8ca68991b1b 608 Gene3D G3DSA:3.60.20.10 2 239 8.6E-74 T 01-11-2018 IPR029055 Nucleophile aminohydrolases, N-terminal CDA09_20285 5faa489f7da0b679a7e1c8ca68991b1b 608 Gene3D G3DSA:3.40.50.10490 247 607 2.6E-140 T 01-11-2018 CDA09_20285 5faa489f7da0b679a7e1c8ca68991b1b 608 SUPERFAMILY SSF56235 2 232 1.97E-68 T 01-11-2018 IPR029055 Nucleophile aminohydrolases, N-terminal CDA09_20285 5faa489f7da0b679a7e1c8ca68991b1b 608 TIGRFAM TIGR01135 glmS: glutamine-fructose-6-phosphate transaminase (isomerizing) 2 608 1.9E-247 T 01-11-2018 IPR005855 Glucosamine-fructose-6-phosphate aminotransferase, isomerising GO:0004360|GO:1901137 KEGG: 00250+2.6.1.16|KEGG: 00520+2.6.1.16|MetaCyc: PWY-6749|Reactome: R-HSA-446210 CDA09_20285 5faa489f7da0b679a7e1c8ca68991b1b 608 Hamap MF_00164 Glutamine--fructose-6-phosphate aminotransferase [isomerizing] [glmS]. 1 608 39.043 T 01-11-2018 IPR005855 Glucosamine-fructose-6-phosphate aminotransferase, isomerising GO:0004360|GO:1901137 KEGG: 00250+2.6.1.16|KEGG: 00520+2.6.1.16|MetaCyc: PWY-6749|Reactome: R-HSA-446210 CDA09_20285 5faa489f7da0b679a7e1c8ca68991b1b 608 SUPERFAMILY SSF53697 243 608 2.13E-108 T 01-11-2018 CDA09_19490 f41394f13fc4e6c622c1b4a4f823d3df 137 PRINTS PR00060 Ribosomal protein L16 signature 58 87 1.6E-40 T 01-11-2018 IPR000114 Ribosomal protein L16 GO:0003735|GO:0006412|GO:0019843 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 CDA09_19490 f41394f13fc4e6c622c1b4a4f823d3df 137 PRINTS PR00060 Ribosomal protein L16 signature 24 36 1.6E-40 T 01-11-2018 IPR000114 Ribosomal protein L16 GO:0003735|GO:0006412|GO:0019843 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 CDA09_19490 f41394f13fc4e6c622c1b4a4f823d3df 137 PRINTS PR00060 Ribosomal protein L16 signature 42 53 1.6E-40 T 01-11-2018 IPR000114 Ribosomal protein L16 GO:0003735|GO:0006412|GO:0019843 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 CDA09_19490 f41394f13fc4e6c622c1b4a4f823d3df 137 PRINTS PR00060 Ribosomal protein L16 signature 88 117 1.6E-40 T 01-11-2018 IPR000114 Ribosomal protein L16 GO:0003735|GO:0006412|GO:0019843 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 CDA09_19490 f41394f13fc4e6c622c1b4a4f823d3df 137 SUPERFAMILY SSF54686 1 134 2.88E-53 T 01-11-2018 IPR036920 Ribosomal protein L10e/L16 superfamily GO:0003735|GO:0005840|GO:0006412 CDA09_19490 f41394f13fc4e6c622c1b4a4f823d3df 137 ProSitePatterns PS00586 Ribosomal protein L16 signature 1. 59 70 - T 01-11-2018 IPR020798 Ribosomal protein L16, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 CDA09_19490 f41394f13fc4e6c622c1b4a4f823d3df 137 Gene3D G3DSA:3.90.1170.10 1 136 5.6E-55 T 01-11-2018 IPR036920 Ribosomal protein L10e/L16 superfamily GO:0003735|GO:0005840|GO:0006412 CDA09_19490 f41394f13fc4e6c622c1b4a4f823d3df 137 ProSitePatterns PS00701 Ribosomal protein L16 signature 2. 82 93 - T 01-11-2018 IPR020798 Ribosomal protein L16, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 CDA09_19490 f41394f13fc4e6c622c1b4a4f823d3df 137 TIGRFAM TIGR01164 rplP_bact: ribosomal protein uL16 2 126 2.2E-59 T 01-11-2018 IPR000114 Ribosomal protein L16 GO:0003735|GO:0006412|GO:0019843 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 CDA09_19490 f41394f13fc4e6c622c1b4a4f823d3df 137 Pfam PF00252 Ribosomal protein L16p/L10e 4 132 8.4E-49 T 01-11-2018 IPR016180 Ribosomal protein L10e/L16 GO:0003735|GO:0005840|GO:0006412 CDA09_19490 f41394f13fc4e6c622c1b4a4f823d3df 137 Hamap MF_01342 50S ribosomal protein L16 [rplP]. 1 134 38.579 T 01-11-2018 IPR000114 Ribosomal protein L16 GO:0003735|GO:0006412|GO:0019843 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 CDA09_16775 11aa87ee02d5ae97523a7e3c74603d6a 176 Pfam PF00719 Inorganic pyrophosphatase 18 170 3.3E-51 T 01-11-2018 IPR008162 Inorganic pyrophosphatase GO:0000287|GO:0004427|GO:0005737|GO:0006796 KEGG: 00190+3.6.1.1|MetaCyc: PWY-7805|MetaCyc: PWY-7807|Reactome: R-HSA-71737 CDA09_16775 11aa87ee02d5ae97523a7e3c74603d6a 176 Hamap MF_00209 Inorganic pyrophosphatase [ppa]. 14 174 35.82 T 01-11-2018 IPR008162 Inorganic pyrophosphatase GO:0000287|GO:0004427|GO:0005737|GO:0006796 KEGG: 00190+3.6.1.1|MetaCyc: PWY-7805|MetaCyc: PWY-7807|Reactome: R-HSA-71737 CDA09_16775 11aa87ee02d5ae97523a7e3c74603d6a 176 SUPERFAMILY SSF50324 3 171 2.09E-65 T 01-11-2018 IPR036649 Inorganic pyrophosphatase superfamily GO:0000287|GO:0004427|GO:0005737|GO:0006796 KEGG: 00190+3.6.1.1|MetaCyc: PWY-7805|MetaCyc: PWY-7807|Reactome: R-HSA-71737 CDA09_16775 11aa87ee02d5ae97523a7e3c74603d6a 176 Gene3D G3DSA:3.90.80.10 1 173 2.7E-67 T 01-11-2018 IPR036649 Inorganic pyrophosphatase superfamily GO:0000287|GO:0004427|GO:0005737|GO:0006796 KEGG: 00190+3.6.1.1|MetaCyc: PWY-7805|MetaCyc: PWY-7807|Reactome: R-HSA-71737 CDA09_16775 11aa87ee02d5ae97523a7e3c74603d6a 176 ProSitePatterns PS00387 Inorganic pyrophosphatase signature. 66 72 - T 01-11-2018 IPR008162 Inorganic pyrophosphatase GO:0000287|GO:0004427|GO:0005737|GO:0006796 KEGG: 00190+3.6.1.1|MetaCyc: PWY-7805|MetaCyc: PWY-7807|Reactome: R-HSA-71737 CDA09_08200 c6404371de8ecfd4662c545de0b53eee 214 SUPERFAMILY SSF55120 8 214 4.16E-58 T 01-11-2018 IPR020103 Pseudouridine synthase, catalytic domain superfamily GO:0001522|GO:0003723|GO:0009451|GO:0009982 CDA09_08200 c6404371de8ecfd4662c545de0b53eee 214 Pfam PF00849 RNA pseudouridylate synthase 15 163 8.3E-33 T 01-11-2018 IPR006145 Pseudouridine synthase, RsuA/RluB/C/D/E/F GO:0001522|GO:0003723|GO:0009451|GO:0009982 CDA09_08200 c6404371de8ecfd4662c545de0b53eee 214 Gene3D G3DSA:3.30.2350.10 3 212 9.9E-69 T 01-11-2018 CDA09_08200 c6404371de8ecfd4662c545de0b53eee 214 ProSitePatterns PS01129 Rlu family of pseudouridine synthase signature. 52 66 - T 01-11-2018 IPR006224 Pseudouridine synthase, RluC/RluD, conserved site GO:0001522|GO:0003723|GO:0009451|GO:0009982 CDA09_21240 c83bdea801d5ef9a3edb06ad28383c8c 487 SUPERFAMILY SSF111352 54 466 4.32E-125 T 01-11-2018 CDA09_21240 c83bdea801d5ef9a3edb06ad28383c8c 487 TIGRFAM TIGR00836 amt: ammonium transporter 58 485 3.7E-133 T 01-11-2018 IPR001905 Ammonium transporter GO:0008519|GO:0016020|GO:0072488 CDA09_21240 c83bdea801d5ef9a3edb06ad28383c8c 487 Gene3D G3DSA:1.10.3430.10 29 487 4.7E-136 T 01-11-2018 IPR029020 Ammonium/urea transporter CDA09_21240 c83bdea801d5ef9a3edb06ad28383c8c 487 ProSitePatterns PS01219 Ammonium transporters signature. 234 259 - T 01-11-2018 IPR018047 Ammonium transporter, conserved site GO:0008519|GO:0016020|GO:0072488 CDA09_21240 c83bdea801d5ef9a3edb06ad28383c8c 487 Pfam PF00909 Ammonium Transporter Family 60 485 4.1E-117 T 01-11-2018 IPR024041 Ammonium transporter AmtB-like domain GO:0008519|GO:0015696|GO:0016020 CDA09_05830 6a5f2a119dc6506341006631aced30e5 773 Gene3D G3DSA:3.90.10.10 334 448 2.6E-6 T 01-11-2018 CDA09_05830 6a5f2a119dc6506341006631aced30e5 773 Pfam PF13432 Tetratricopeptide repeat 611 673 1.9E-7 T 01-11-2018 CDA09_05830 6a5f2a119dc6506341006631aced30e5 773 Pfam PF13432 Tetratricopeptide repeat 679 741 9.7E-7 T 01-11-2018 CDA09_05830 6a5f2a119dc6506341006631aced30e5 773 SMART SM00028 674 707 13.0 T 01-11-2018 IPR019734 Tetratricopeptide repeat GO:0005515 CDA09_05830 6a5f2a119dc6506341006631aced30e5 773 SMART SM00028 606 639 0.0055 T 01-11-2018 IPR019734 Tetratricopeptide repeat GO:0005515 CDA09_05830 6a5f2a119dc6506341006631aced30e5 773 SMART SM00028 640 673 29.0 T 01-11-2018 IPR019734 Tetratricopeptide repeat GO:0005515 CDA09_05830 6a5f2a119dc6506341006631aced30e5 773 Gene3D G3DSA:1.10.1130.10 174 313 4.7E-12 T 01-11-2018 CDA09_05830 6a5f2a119dc6506341006631aced30e5 773 Pfam PF09699 Doubled CXXCH motif (Paired_CXXCH_1) 356 383 1.0E-4 T 01-11-2018 IPR010177 Doubled CXXCH motif CDA09_05830 6a5f2a119dc6506341006631aced30e5 773 SUPERFAMILY SSF48695 56 463 8.58E-61 T 01-11-2018 IPR036280 Multiheme cytochrome superfamily CDA09_05830 6a5f2a119dc6506341006631aced30e5 773 Gene3D G3DSA:1.25.40.10 564 769 3.7E-26 T 01-11-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 CDA09_05830 6a5f2a119dc6506341006631aced30e5 773 SUPERFAMILY SSF48452 589 743 7.05E-21 T 01-11-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 CDA09_05830 6a5f2a119dc6506341006631aced30e5 773 Pfam PF13435 Cytochrome c554 and c-prime 197 235 0.0054 T 01-11-2018 IPR023155 Cytochrome c-552/4 CDA09_05830 6a5f2a119dc6506341006631aced30e5 773 Pfam PF13435 Cytochrome c554 and c-prime 62 83 0.024 T 01-11-2018 IPR023155 Cytochrome c-552/4 CDA09_22220 0100de565211df48326006187234a495 175 ProSitePatterns PS00087 Copper/Zinc superoxide dismutase signature 1. 70 80 - T 01-11-2018 IPR018152 Superoxide dismutase, copper/zinc, binding site GO:0004784|GO:0055114 MetaCyc: PWY-6854|Reactome: R-HSA-3299685 CDA09_22220 0100de565211df48326006187234a495 175 PRINTS PR00068 Cu-Zn-superoxide dismutase family signature 70 92 3.3E-5 T 01-11-2018 IPR001424 Superoxide dismutase, copper/zinc binding domain GO:0006801|GO:0046872 MetaCyc: PWY-6854|Reactome: R-HSA-3299685 CDA09_22220 0100de565211df48326006187234a495 175 PRINTS PR00068 Cu-Zn-superoxide dismutase family signature 107 116 3.3E-5 T 01-11-2018 IPR001424 Superoxide dismutase, copper/zinc binding domain GO:0006801|GO:0046872 MetaCyc: PWY-6854|Reactome: R-HSA-3299685 CDA09_22220 0100de565211df48326006187234a495 175 PRINTS PR00068 Cu-Zn-superoxide dismutase family signature 147 173 3.3E-5 T 01-11-2018 IPR001424 Superoxide dismutase, copper/zinc binding domain GO:0006801|GO:0046872 MetaCyc: PWY-6854|Reactome: R-HSA-3299685 CDA09_22220 0100de565211df48326006187234a495 175 SUPERFAMILY SSF49329 32 172 6.02E-46 T 01-11-2018 IPR036423 Superoxide dismutase-like, copper/zinc binding domain superfamily GO:0006801|GO:0046872 MetaCyc: PWY-6854|Reactome: R-HSA-3299685 CDA09_22220 0100de565211df48326006187234a495 175 Gene3D G3DSA:2.60.40.200 29 175 1.9E-49 T 01-11-2018 IPR036423 Superoxide dismutase-like, copper/zinc binding domain superfamily GO:0006801|GO:0046872 MetaCyc: PWY-6854|Reactome: R-HSA-3299685 CDA09_22220 0100de565211df48326006187234a495 175 ProSitePatterns PS00332 Copper/Zinc superoxide dismutase signature 2. 161 172 - T 01-11-2018 IPR018152 Superoxide dismutase, copper/zinc, binding site GO:0004784|GO:0055114 MetaCyc: PWY-6854|Reactome: R-HSA-3299685 CDA09_22220 0100de565211df48326006187234a495 175 Pfam PF00080 Copper/zinc superoxide dismutase (SODC) 38 172 7.4E-45 T 01-11-2018 IPR001424 Superoxide dismutase, copper/zinc binding domain GO:0006801|GO:0046872 MetaCyc: PWY-6854|Reactome: R-HSA-3299685 CDA09_19400 49c8508da481f174dba2d87c0f36f32f 209 Gene3D G3DSA:1.10.1050.10 6 209 1.8E-83 T 01-11-2018 CDA09_19400 49c8508da481f174dba2d87c0f36f32f 209 SMART SM01390 3 98 3.5E-51 T 01-11-2018 IPR001912 Ribosomal protein S4/S9, N-terminal GO:0005622|GO:0019843 Reactome: R-HSA-6790901|Reactome: R-HSA-6791226 CDA09_19400 49c8508da481f174dba2d87c0f36f32f 209 TIGRFAM TIGR01017 rpsD_bact: ribosomal protein uS4 4 209 2.6E-72 T 01-11-2018 IPR005709 Ribosomal protein S4, bacterial-type GO:0003735|GO:0006412|GO:0015935 CDA09_19400 49c8508da481f174dba2d87c0f36f32f 209 Pfam PF00163 Ribosomal protein S4/S9 N-terminal domain 3 98 8.1E-31 T 01-11-2018 IPR001912 Ribosomal protein S4/S9, N-terminal GO:0005622|GO:0019843 Reactome: R-HSA-6790901|Reactome: R-HSA-6791226 CDA09_19400 49c8508da481f174dba2d87c0f36f32f 209 SMART SM00363 99 163 1.5E-16 T 01-11-2018 IPR002942 RNA-binding S4 domain GO:0003723 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 CDA09_19400 49c8508da481f174dba2d87c0f36f32f 209 Pfam PF01479 S4 domain 100 146 1.0E-17 T 01-11-2018 IPR002942 RNA-binding S4 domain GO:0003723 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 CDA09_19400 49c8508da481f174dba2d87c0f36f32f 209 SUPERFAMILY SSF55174 2 209 1.44E-66 T 01-11-2018 CDA09_19400 49c8508da481f174dba2d87c0f36f32f 209 Gene3D G3DSA:3.10.290.10 98 194 1.8E-83 T 01-11-2018 IPR036986 RNA-binding S4 domain superfamily GO:0003723 CDA09_19400 49c8508da481f174dba2d87c0f36f32f 209 Hamap MF_01306_B 30S ribosomal protein S4 [rpsD]. 1 209 34.759 T 01-11-2018 IPR005709 Ribosomal protein S4, bacterial-type GO:0003735|GO:0006412|GO:0015935 CDA09_19400 49c8508da481f174dba2d87c0f36f32f 209 ProSitePatterns PS00632 Ribosomal protein S4 signature. 97 121 - T 01-11-2018 IPR018079 Ribosomal protein S4, conserved site GO:0005622|GO:0019843 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6790901|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 CDA09_13325 0bd847136bd879b63d9e280e2878078e 210 SUPERFAMILY SSF48150 2 208 4.24E-73 T 01-11-2018 IPR011257 DNA glycosylase GO:0003824|GO:0006281 Reactome: R-HSA-110357 CDA09_13325 0bd847136bd879b63d9e280e2878078e 210 Pfam PF00730 HhH-GPD superfamily base excision DNA repair protein 34 168 1.2E-17 T 01-11-2018 IPR003265 HhH-GPD domain GO:0006284 Reactome: R-HSA-110357 CDA09_13325 0bd847136bd879b63d9e280e2878078e 210 SMART SM00525 186 206 2.0E-4 T 01-11-2018 IPR003651 Endonuclease III-like, iron-sulphur cluster loop motif GO:0051539 Reactome: R-HSA-110357 CDA09_13325 0bd847136bd879b63d9e280e2878078e 210 SMART SM00478 38 185 3.7E-56 T 01-11-2018 IPR003265 HhH-GPD domain GO:0006284 Reactome: R-HSA-110357 CDA09_13325 0bd847136bd879b63d9e280e2878078e 210 Hamap MF_00942 Endonuclease III [nth]. 1 209 37.259 T 01-11-2018 IPR005759 Endonuclease III GO:0003906|GO:0006284 CDA09_13325 0bd847136bd879b63d9e280e2878078e 210 PIRSF PIRSF001435 1 210 8.9E-51 T 01-11-2018 CDA09_13325 0bd847136bd879b63d9e280e2878078e 210 TIGRFAM TIGR01083 nth: endonuclease III 5 194 2.7E-80 T 01-11-2018 IPR005759 Endonuclease III GO:0003906|GO:0006284 CDA09_13325 0bd847136bd879b63d9e280e2878078e 210 Gene3D G3DSA:1.10.340.30 21 132 3.6E-76 T 01-11-2018 CDA09_13325 0bd847136bd879b63d9e280e2878078e 210 Pfam PF10576 Iron-sulfur binding domain of endonuclease III 187 203 2.3E-5 T 01-11-2018 IPR003651 Endonuclease III-like, iron-sulphur cluster loop motif GO:0051539 Reactome: R-HSA-110357 CDA09_13325 0bd847136bd879b63d9e280e2878078e 210 ProSitePatterns PS01155 Endonuclease III family signature. 102 131 - T 01-11-2018 IPR004036 Endonuclease III-like, conserved site-2 Reactome: R-HSA-110357 CDA09_13325 0bd847136bd879b63d9e280e2878078e 210 Gene3D G3DSA:1.10.1670.10 11 203 3.6E-76 T 01-11-2018 IPR023170 Helix-turn-helix, base-excision DNA repair, C-terminal Reactome: R-HSA-110357 CDA09_13325 0bd847136bd879b63d9e280e2878078e 210 ProSitePatterns PS00764 Endonuclease III iron-sulfur binding region signature. 187 203 - T 01-11-2018 IPR004035 Endonuclease III, iron-sulphur binding site Reactome: R-HSA-110330|Reactome: R-HSA-110331|Reactome: R-HSA-110357 CDA09_13325 0bd847136bd879b63d9e280e2878078e 210 Pfam PF00633 Helix-hairpin-helix motif 99 127 9.8E-7 T 01-11-2018 IPR000445 Helix-hairpin-helix motif GO:0003677 Reactome: R-HSA-110357 CDA09_13975 c3939ddd282a2ff4b58c87788cbba51b 301 Gene3D G3DSA:3.40.50.300 2 276 8.8E-42 T 01-11-2018 CDA09_13975 c3939ddd282a2ff4b58c87788cbba51b 301 Pfam PF13614 AAA domain 4 187 6.2E-20 T 01-11-2018 IPR025669 AAA domain CDA09_13975 c3939ddd282a2ff4b58c87788cbba51b 301 SUPERFAMILY SSF52540 5 272 4.59E-34 T 01-11-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CDA09_18390 fb42051ba9f5a8a1b557df056bde181d 385 SUPERFAMILY SSF53756 4 382 4.93E-67 T 01-11-2018 CDA09_18390 fb42051ba9f5a8a1b557df056bde181d 385 Gene3D G3DSA:3.40.50.2000 182 363 3.2E-49 T 01-11-2018 CDA09_18390 fb42051ba9f5a8a1b557df056bde181d 385 Pfam PF00534 Glycosyl transferases group 1 209 349 2.1E-27 T 01-11-2018 IPR001296 Glycosyl transferase, family 1 CDA09_18390 fb42051ba9f5a8a1b557df056bde181d 385 Pfam PF13579 Glycosyl transferase 4-like domain 15 180 3.5E-8 T 01-11-2018 IPR028098 Glycosyltransferase subfamily 4-like, N-terminal domain Reactome: R-HSA-446193|Reactome: R-HSA-4549349 CDA09_18390 fb42051ba9f5a8a1b557df056bde181d 385 Gene3D G3DSA:3.40.50.2000 116 379 3.2E-49 T 01-11-2018 CDA09_01660 69841d97f7f35f95046b9778dede073d 973 SUPERFAMILY SSF55785 291 395 9.02E-26 T 01-11-2018 IPR035965 PAS domain superfamily CDA09_01660 69841d97f7f35f95046b9778dede073d 973 SUPERFAMILY SSF55785 139 268 1.74E-18 T 01-11-2018 IPR035965 PAS domain superfamily CDA09_01660 69841d97f7f35f95046b9778dede073d 973 Pfam PF00990 Diguanylate cyclase, GGDEF domain 406 563 5.4E-41 T 01-11-2018 IPR000160 GGDEF domain CDA09_01660 69841d97f7f35f95046b9778dede073d 973 SUPERFAMILY SSF52172 847 964 8.54E-31 T 01-11-2018 IPR011006 CheY-like superfamily CDA09_01660 69841d97f7f35f95046b9778dede073d 973 SMART SM00052 577 823 5.6E-123 T 01-11-2018 IPR001633 EAL domain CDA09_01660 69841d97f7f35f95046b9778dede073d 973 Gene3D G3DSA:3.20.20.450 579 830 2.1E-105 T 01-11-2018 IPR035919 EAL domain superfamily CDA09_01660 69841d97f7f35f95046b9778dede073d 973 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 302 402 7.4E-20 T 01-11-2018 IPR000014 PAS domain CDA09_01660 69841d97f7f35f95046b9778dede073d 973 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 149 271 1.1E-10 T 01-11-2018 IPR000014 PAS domain CDA09_01660 69841d97f7f35f95046b9778dede073d 973 SMART SM00267 395 567 5.3E-55 T 01-11-2018 IPR000160 GGDEF domain CDA09_01660 69841d97f7f35f95046b9778dede073d 973 Pfam PF08448 PAS fold 158 270 6.6E-16 T 01-11-2018 IPR013656 PAS fold-4 CDA09_01660 69841d97f7f35f95046b9778dede073d 973 Gene3D G3DSA:3.40.50.2300 23 139 5.3E-19 T 01-11-2018 CDA09_01660 69841d97f7f35f95046b9778dede073d 973 SMART SM00086 353 395 8.3E-9 T 01-11-2018 IPR001610 PAC motif CDA09_01660 69841d97f7f35f95046b9778dede073d 973 SMART SM00086 227 270 9.8E-6 T 01-11-2018 IPR001610 PAC motif CDA09_01660 69841d97f7f35f95046b9778dede073d 973 SUPERFAMILY SSF55073 411 566 2.9E-41 T 01-11-2018 IPR029787 Nucleotide cyclase CDA09_01660 69841d97f7f35f95046b9778dede073d 973 Pfam PF00563 EAL domain 584 818 4.5E-74 T 01-11-2018 IPR001633 EAL domain CDA09_01660 69841d97f7f35f95046b9778dede073d 973 Gene3D G3DSA:3.30.450.20 140 280 5.0E-28 T 01-11-2018 CDA09_01660 69841d97f7f35f95046b9778dede073d 973 Gene3D G3DSA:3.40.50.2300 839 969 4.3E-31 T 01-11-2018 CDA09_01660 69841d97f7f35f95046b9778dede073d 973 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 402 564 1.9E-32 T 01-11-2018 IPR000160 GGDEF domain CDA09_01660 69841d97f7f35f95046b9778dede073d 973 SUPERFAMILY SSF141868 582 830 3.14E-91 T 01-11-2018 IPR035919 EAL domain superfamily CDA09_01660 69841d97f7f35f95046b9778dede073d 973 Gene3D G3DSA:3.30.450.20 281 410 2.8E-39 T 01-11-2018 CDA09_01660 69841d97f7f35f95046b9778dede073d 973 SMART SM00448 22 133 6.9E-20 T 01-11-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 CDA09_01660 69841d97f7f35f95046b9778dede073d 973 SMART SM00448 846 958 6.7E-24 T 01-11-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 CDA09_01660 69841d97f7f35f95046b9778dede073d 973 SUPERFAMILY SSF52172 22 156 3.7E-27 T 01-11-2018 IPR011006 CheY-like superfamily CDA09_01660 69841d97f7f35f95046b9778dede073d 973 Pfam PF13426 PAS domain 297 394 8.6E-17 T 01-11-2018 IPR000014 PAS domain CDA09_01660 69841d97f7f35f95046b9778dede073d 973 Pfam PF00072 Response regulator receiver domain 849 958 1.8E-21 T 01-11-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 CDA09_01660 69841d97f7f35f95046b9778dede073d 973 Pfam PF00072 Response regulator receiver domain 24 133 1.8E-14 T 01-11-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 CDA09_01660 69841d97f7f35f95046b9778dede073d 973 SMART SM00091 278 347 8.7E-5 T 01-11-2018 IPR000014 PAS domain CDA09_01660 69841d97f7f35f95046b9778dede073d 973 SMART SM00091 151 218 0.006 T 01-11-2018 IPR000014 PAS domain CDA09_01660 69841d97f7f35f95046b9778dede073d 973 Gene3D G3DSA:3.30.70.270 411 578 1.4E-47 T 01-11-2018 CDA09_09095 47339f234428032f979284550619ee81 359 Gene3D G3DSA:2.130.10.10 24 155 5.7E-6 T 01-11-2018 IPR015943 WD40/YVTN repeat-like-containing domain superfamily GO:0005515 CDA09_09095 47339f234428032f979284550619ee81 359 Gene3D G3DSA:2.130.10.10 172 340 1.6E-9 T 01-11-2018 IPR015943 WD40/YVTN repeat-like-containing domain superfamily GO:0005515 CDA09_09095 47339f234428032f979284550619ee81 359 SUPERFAMILY SSF110296 46 327 1.54E-32 T 01-11-2018 CDA09_09095 47339f234428032f979284550619ee81 359 Pfam PF14870 Photosynthesis system II assembly factor YCF48 78 124 4.5E-7 T 01-11-2018 IPR028203 Photosynthesis system II assembly factor Ycf48/Hcf136-like domain CDA09_09095 47339f234428032f979284550619ee81 359 Pfam PF14870 Photosynthesis system II assembly factor YCF48 168 320 1.3E-13 T 01-11-2018 IPR028203 Photosynthesis system II assembly factor Ycf48/Hcf136-like domain CDA09_08120 40551c399a1e7c6458f3a1a65b612486 327 Gene3D G3DSA:1.10.150.130 54 161 2.9E-9 T 01-11-2018 IPR010998 Integrase/recombinase, N-terminal CDA09_08120 40551c399a1e7c6458f3a1a65b612486 327 SUPERFAMILY SSF56349 59 322 1.11E-60 T 01-11-2018 IPR011010 DNA breaking-rejoining enzyme, catalytic core GO:0003677 CDA09_08120 40551c399a1e7c6458f3a1a65b612486 327 Gene3D G3DSA:1.10.443.10 162 326 8.3E-37 T 01-11-2018 IPR013762 Integrase-like, catalytic domain superfamily GO:0003677|GO:0006310|GO:0015074 CDA09_08120 40551c399a1e7c6458f3a1a65b612486 327 Pfam PF00589 Phage integrase family 164 318 2.6E-23 T 01-11-2018 IPR002104 Integrase, catalytic domain GO:0003677|GO:0006310|GO:0015074 CDA09_19960 3f2844b1bcb327eef22e8d51096de23c 59 Pfam PF04964 Flp/Fap pilin component 13 55 1.9E-10 T 01-11-2018 IPR007047 Flp/Fap pilin component CDA09_00330 5147273acbb23d03da8e0ab208da5077 704 SUPERFAMILY SSF54862 209 264 1.77E-13 T 01-11-2018 CDA09_00330 5147273acbb23d03da8e0ab208da5077 704 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 215 226 - T 01-11-2018 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site CDA09_00330 5147273acbb23d03da8e0ab208da5077 704 SUPERFAMILY SSF54862 310 687 9.43E-42 T 01-11-2018 CDA09_00330 5147273acbb23d03da8e0ab208da5077 704 Gene3D G3DSA:3.30.70.20 209 259 1.6E-6 T 01-11-2018 CDA09_00330 5147273acbb23d03da8e0ab208da5077 704 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 364 375 - T 01-11-2018 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site CDA09_00330 5147273acbb23d03da8e0ab208da5077 704 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 603 614 - T 01-11-2018 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site CDA09_00330 5147273acbb23d03da8e0ab208da5077 704 Pfam PF00037 4Fe-4S binding domain 601 619 1.2E-5 T 01-11-2018 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain CDA09_00330 5147273acbb23d03da8e0ab208da5077 704 Pfam PF00037 4Fe-4S binding domain 358 379 3.4E-7 T 01-11-2018 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain CDA09_00330 5147273acbb23d03da8e0ab208da5077 704 Pfam PF00037 4Fe-4S binding domain 210 230 2.5E-6 T 01-11-2018 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain CDA09_00330 5147273acbb23d03da8e0ab208da5077 704 Pfam PF00037 4Fe-4S binding domain 569 587 7.2E-5 T 01-11-2018 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain CDA09_00330 5147273acbb23d03da8e0ab208da5077 704 Gene3D G3DSA:3.30.70.20 329 390 1.0E-10 T 01-11-2018 CDA09_00330 5147273acbb23d03da8e0ab208da5077 704 Gene3D G3DSA:3.30.70.20 565 633 8.9E-12 T 01-11-2018 CDA09_13905 23c85386dec6a371464bed048dcdaa81 526 Pfam PF01593 Flavin containing amine oxidoreductase 18 337 3.9E-16 T 01-11-2018 IPR002937 Amine oxidase GO:0016491|GO:0055114 CDA09_13905 23c85386dec6a371464bed048dcdaa81 526 Gene3D G3DSA:3.50.50.60 203 333 6.7E-15 T 01-11-2018 IPR036188 FAD/NAD(P)-binding domain superfamily CDA09_13905 23c85386dec6a371464bed048dcdaa81 526 SUPERFAMILY SSF51905 5 405 4.41E-39 T 01-11-2018 IPR036188 FAD/NAD(P)-binding domain superfamily CDA09_13905 23c85386dec6a371464bed048dcdaa81 526 Gene3D G3DSA:3.50.50.60 6 119 1.1E-12 T 01-11-2018 IPR036188 FAD/NAD(P)-binding domain superfamily CDA09_14025 0ad4c4ab77c696ebe2cafb0ab8c9e7f0 123 Pfam PF11190 Protein of unknown function (DUF2976) 35 121 1.5E-23 T 01-11-2018 IPR021356 Integrating conjugative element protein PFL4702 CDA09_14025 0ad4c4ab77c696ebe2cafb0ab8c9e7f0 123 TIGRFAM TIGR03745 conj_TIGR03745: integrating conjugative element membrane protein, PFL_4702 family 22 122 1.1E-25 T 01-11-2018 IPR021356 Integrating conjugative element protein PFL4702 CDA09_12435 14ca16178bd0e6e17cd4019557607b74 547 Gene3D G3DSA:3.40.50.880 285 545 2.4E-100 T 01-11-2018 IPR029062 Class I glutamine amidotransferase-like CDA09_12435 14ca16178bd0e6e17cd4019557607b74 547 TIGRFAM TIGR00337 PyrG: CTP synthase 1 536 2.3E-249 T 01-11-2018 IPR004468 CTP synthase GO:0003883|GO:0006221 KEGG: 00240+6.3.4.2|MetaCyc: PWY-7176|MetaCyc: PWY-7177|MetaCyc: PWY-7185|Reactome: R-HSA-499943 CDA09_12435 14ca16178bd0e6e17cd4019557607b74 547 Gene3D G3DSA:3.40.50.300 1 284 9.3E-132 T 01-11-2018 CDA09_12435 14ca16178bd0e6e17cd4019557607b74 547 SUPERFAMILY SSF52540 1 266 7.97E-123 T 01-11-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CDA09_12435 14ca16178bd0e6e17cd4019557607b74 547 SUPERFAMILY SSF52317 289 540 2.29E-82 T 01-11-2018 IPR029062 Class I glutamine amidotransferase-like CDA09_12435 14ca16178bd0e6e17cd4019557607b74 547 Pfam PF06418 CTP synthase N-terminus 3 265 1.7E-127 T 01-11-2018 IPR017456 CTP synthase, N-terminal GO:0003883|GO:0006221 KEGG: 00240+6.3.4.2|MetaCyc: PWY-7176|MetaCyc: PWY-7177|MetaCyc: PWY-7185|Reactome: R-HSA-499943 CDA09_12435 14ca16178bd0e6e17cd4019557607b74 547 Hamap MF_01227 CTP synthase [pyrG]. 2 541 51.26 T 01-11-2018 IPR004468 CTP synthase GO:0003883|GO:0006221 KEGG: 00240+6.3.4.2|MetaCyc: PWY-7176|MetaCyc: PWY-7177|MetaCyc: PWY-7185|Reactome: R-HSA-499943 CDA09_12435 14ca16178bd0e6e17cd4019557607b74 547 Pfam PF00117 Glutamine amidotransferase class-I 300 535 2.2E-56 T 01-11-2018 IPR017926 Glutamine amidotransferase CDA09_00775 2b99e0e5e1325169906e6c3b707753e6 314 SUPERFAMILY SSF53850 87 299 1.09E-32 T 01-11-2018 CDA09_00775 2b99e0e5e1325169906e6c3b707753e6 314 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 18 29 3.4E-8 T 01-11-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 CDA09_00775 2b99e0e5e1325169906e6c3b707753e6 314 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 29 39 3.4E-8 T 01-11-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 CDA09_00775 2b99e0e5e1325169906e6c3b707753e6 314 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 39 50 3.4E-8 T 01-11-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 CDA09_00775 2b99e0e5e1325169906e6c3b707753e6 314 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 3 62 1.8E-23 T 01-11-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 CDA09_00775 2b99e0e5e1325169906e6c3b707753e6 314 Gene3D G3DSA:1.10.10.10 1 90 1.6E-29 T 01-11-2018 IPR036388 Winged helix-like DNA-binding domain superfamily CDA09_00775 2b99e0e5e1325169906e6c3b707753e6 314 SUPERFAMILY SSF46785 1 86 8.31E-25 T 01-11-2018 IPR036390 Winged helix DNA-binding domain superfamily CDA09_00775 2b99e0e5e1325169906e6c3b707753e6 314 Pfam PF03466 LysR substrate binding domain 87 289 1.9E-33 T 01-11-2018 IPR005119 LysR, substrate-binding CDA09_00775 2b99e0e5e1325169906e6c3b707753e6 314 Gene3D G3DSA:3.40.190.290 91 298 2.9E-33 T 01-11-2018 CDA09_09720 a24a9b5bea9fa8ff605637c549e81f1b 380 Pfam PF00196 Bacterial regulatory proteins, luxR family 315 368 3.7E-6 T 01-11-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 CDA09_09720 a24a9b5bea9fa8ff605637c549e81f1b 380 SUPERFAMILY SSF46894 304 370 5.78E-13 T 01-11-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 CDA09_09720 a24a9b5bea9fa8ff605637c549e81f1b 380 SMART SM00421 312 369 3.7E-9 T 01-11-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 CDA09_09720 a24a9b5bea9fa8ff605637c549e81f1b 380 Gene3D G3DSA:1.10.10.10 305 372 1.3E-12 T 01-11-2018 IPR036388 Winged helix-like DNA-binding domain superfamily CDA09_02755 5d95f4e647deaaf7d45c9c9f3a0be3f1 341 SUPERFAMILY SSF55174 103 183 2.09E-15 T 01-11-2018 CDA09_02755 5d95f4e647deaaf7d45c9c9f3a0be3f1 341 TIGRFAM TIGR00093 TIGR00093: pseudouridine synthase 205 336 1.1E-38 T 01-11-2018 IPR000748 Pseudouridine synthase, RsuA/RluB/E/F GO:0001522|GO:0003723|GO:0009451|GO:0016866 CDA09_02755 5d95f4e647deaaf7d45c9c9f3a0be3f1 341 Pfam PF01479 S4 domain 103 149 1.1E-7 T 01-11-2018 IPR002942 RNA-binding S4 domain GO:0003723 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 CDA09_02755 5d95f4e647deaaf7d45c9c9f3a0be3f1 341 SUPERFAMILY SSF55120 164 339 3.2E-38 T 01-11-2018 IPR020103 Pseudouridine synthase, catalytic domain superfamily GO:0001522|GO:0003723|GO:0009451|GO:0009982 CDA09_02755 5d95f4e647deaaf7d45c9c9f3a0be3f1 341 Pfam PF00849 RNA pseudouridylate synthase 165 305 7.3E-11 T 01-11-2018 IPR006145 Pseudouridine synthase, RsuA/RluB/C/D/E/F GO:0001522|GO:0003723|GO:0009451|GO:0009982 CDA09_02755 5d95f4e647deaaf7d45c9c9f3a0be3f1 341 SMART SM00363 103 164 4.1E-4 T 01-11-2018 IPR002942 RNA-binding S4 domain GO:0003723 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 CDA09_02755 5d95f4e647deaaf7d45c9c9f3a0be3f1 341 Gene3D G3DSA:3.30.2350.10 159 341 3.2E-45 T 01-11-2018 CDA09_02755 5d95f4e647deaaf7d45c9c9f3a0be3f1 341 Gene3D G3DSA:3.10.290.10 99 155 4.6E-17 T 01-11-2018 IPR036986 RNA-binding S4 domain superfamily GO:0003723 CDA09_16105 0a91270ae5d7f4c10909bde66fad2947 71 Gene3D G3DSA:1.20.58.660 1 68 2.0E-7 T 01-11-2018 CDA09_16105 0a91270ae5d7f4c10909bde66fad2947 71 Pfam PF04325 Protein of unknown function (DUF465) 17 61 4.9E-15 T 01-11-2018 IPR007420 Protein of unknown function DUF465 CDA09_08750 5efeb817150733b655c7b73af6cfc58f 91 Gene3D G3DSA:1.10.10.1150 1 90 1.2E-25 T 01-11-2018 CDA09_08750 5efeb817150733b655c7b73af6cfc58f 91 Pfam PF05402 Coenzyme PQQ synthesis protein D (PqqD) 28 89 2.6E-13 T 01-11-2018 IPR008792 Coenzyme PQQ synthesis D CDA09_08750 5efeb817150733b655c7b73af6cfc58f 91 Hamap MF_00655 Coenzyme PQQ synthesis protein D [pqqD]. 5 91 21.964 T 01-11-2018 IPR022479 Coenzyme PQQ synthesis D, bacteria GO:0018189|GO:0048038 CDA09_08750 5efeb817150733b655c7b73af6cfc58f 91 TIGRFAM TIGR03859 PQQ_PqqD: coenzyme PQQ biosynthesis protein PqqD 11 90 6.0E-35 T 01-11-2018 IPR022479 Coenzyme PQQ synthesis D, bacteria GO:0018189|GO:0048038 CDA09_18685 6ca4ee6827afb9a14395d7366502fd85 427 Pfam PF00202 Aminotransferase class-III 34 390 8.6E-73 T 01-11-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 CDA09_18685 6ca4ee6827afb9a14395d7366502fd85 427 Hamap MF_00375 Glutamate-1-semialdehyde 2,1-aminomutase [hemL]. 4 426 103.833 T 01-11-2018 IPR004639 Tetrapyrrole biosynthesis, glutamate-1-semialdehyde aminotransferase GO:0033014|GO:0042286 KEGG: 00860+5.4.3.8|MetaCyc: PWY-5188 CDA09_18685 6ca4ee6827afb9a14395d7366502fd85 427 Gene3D G3DSA:3.90.1150.10 8 418 4.2E-175 T 01-11-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 CDA09_18685 6ca4ee6827afb9a14395d7366502fd85 427 Gene3D G3DSA:3.40.640.10 70 318 4.2E-175 T 01-11-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 CDA09_18685 6ca4ee6827afb9a14395d7366502fd85 427 TIGRFAM TIGR00713 hemL: glutamate-1-semialdehyde-2,1-aminomutase 4 425 6.9E-185 T 01-11-2018 IPR004639 Tetrapyrrole biosynthesis, glutamate-1-semialdehyde aminotransferase GO:0033014|GO:0042286 KEGG: 00860+5.4.3.8|MetaCyc: PWY-5188 CDA09_18685 6ca4ee6827afb9a14395d7366502fd85 427 SUPERFAMILY SSF53383 3 424 5.9E-130 T 01-11-2018 IPR015424 Pyridoxal phosphate-dependent transferase CDA09_18685 6ca4ee6827afb9a14395d7366502fd85 427 ProSitePatterns PS00600 Aminotransferases class-III pyridoxal-phosphate attachment site. 235 271 - T 01-11-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 CDA09_16670 a7bfb724e8858b0feaecf979ff23028d 193 Hamap MF_00459 Ion-translocating oxidoreductase complex subunit A [rsxA]. 2 191 24.557 T 01-11-2018 IPR011293 Ion-translocating oxidoreductase complex, subunit RnfA/RsxA GO:0022900 CDA09_16670 a7bfb724e8858b0feaecf979ff23028d 193 TIGRFAM TIGR01943 rnfA: electron transport complex, RnfABCDGE type, A subunit 3 190 8.3E-80 T 01-11-2018 IPR011293 Ion-translocating oxidoreductase complex, subunit RnfA/RsxA GO:0022900 CDA09_16670 a7bfb724e8858b0feaecf979ff23028d 193 Pfam PF02508 Rnf-Nqr subunit, membrane protein 5 190 2.1E-56 T 01-11-2018 IPR003667 NqrDE/RnfAE GO:0016020 CDA09_16670 a7bfb724e8858b0feaecf979ff23028d 193 PIRSF PIRSF006102 1 193 1.5E-54 T 01-11-2018 IPR003667 NqrDE/RnfAE GO:0016020 CDA09_13235 17be4c2c6e7674c15fe6cc327fbb99db 327 PIRSF PIRSF015582 13 324 2.8E-44 T 01-11-2018 IPR011206 Citrate lyase beta subunit-like CDA09_13235 17be4c2c6e7674c15fe6cc327fbb99db 327 Pfam PF03328 HpcH/HpaI aldolase/citrate lyase family 50 239 4.2E-11 T 01-11-2018 IPR005000 HpcH/HpaI aldolase/citrate lyase domain GO:0003824 CDA09_13235 17be4c2c6e7674c15fe6cc327fbb99db 327 SUPERFAMILY SSF51621 25 262 2.93E-39 T 01-11-2018 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain superfamily GO:0003824 CDA09_13235 17be4c2c6e7674c15fe6cc327fbb99db 327 Gene3D G3DSA:3.20.20.60 1 265 1.4E-105 T 01-11-2018 CDA09_21315 78899fbbec990e844aa70bfe13480e22 316 ProSitePatterns PS00108 Serine/Threonine protein kinases active-site signature. 155 167 - T 01-11-2018 IPR008271 Serine/threonine-protein kinase, active site GO:0004672|GO:0006468 CDA09_21315 78899fbbec990e844aa70bfe13480e22 316 SMART SM00220 18 288 8.2E-34 T 01-11-2018 IPR000719 Protein kinase domain GO:0004672|GO:0005524|GO:0006468 CDA09_21315 78899fbbec990e844aa70bfe13480e22 316 Gene3D G3DSA:1.10.510.10 13 299 4.5E-51 T 01-11-2018 CDA09_21315 78899fbbec990e844aa70bfe13480e22 316 SUPERFAMILY SSF56112 15 283 2.13E-54 T 01-11-2018 IPR011009 Protein kinase-like domain superfamily CDA09_21315 78899fbbec990e844aa70bfe13480e22 316 Pfam PF00069 Protein kinase domain 18 281 7.3E-35 T 01-11-2018 IPR000719 Protein kinase domain GO:0004672|GO:0005524|GO:0006468 CDA09_06500 5677e82173bc855f062fd0731589045d 155 Gene3D G3DSA:1.10.10.10 1 56 4.1E-26 T 01-11-2018 IPR036388 Winged helix-like DNA-binding domain superfamily CDA09_06500 5677e82173bc855f062fd0731589045d 155 ProSitePatterns PS00519 AsnC-type HTH domain signature. 21 47 - T 01-11-2018 IPR019885 Transcription regulator HTH, AsnC-type, conserved site CDA09_06500 5677e82173bc855f062fd0731589045d 155 SMART SM00344 3 113 2.7E-41 T 01-11-2018 IPR019888 Transcription regulator AsnC-type GO:0003700|GO:0005622|GO:0006355|GO:0043565 CDA09_06500 5677e82173bc855f062fd0731589045d 155 Pfam PF13412 Winged helix-turn-helix DNA-binding 3 49 4.0E-21 T 01-11-2018 CDA09_06500 5677e82173bc855f062fd0731589045d 155 SUPERFAMILY SSF54909 64 153 1.74E-21 T 01-11-2018 IPR011008 Dimeric alpha-beta barrel CDA09_06500 5677e82173bc855f062fd0731589045d 155 Gene3D G3DSA:3.30.70.920 57 141 7.3E-27 T 01-11-2018 CDA09_06500 5677e82173bc855f062fd0731589045d 155 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 30 49 4.5E-19 T 01-11-2018 IPR000485 AsnC-type HTH domain GO:0043565 CDA09_06500 5677e82173bc855f062fd0731589045d 155 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 19 30 4.5E-19 T 01-11-2018 IPR000485 AsnC-type HTH domain GO:0043565 CDA09_06500 5677e82173bc855f062fd0731589045d 155 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 3 19 4.5E-19 T 01-11-2018 IPR000485 AsnC-type HTH domain GO:0043565 CDA09_06500 5677e82173bc855f062fd0731589045d 155 Pfam PF01037 Lrp/AsnC ligand binding domain 69 143 7.8E-24 T 01-11-2018 IPR019887 Transcription regulator AsnC/Lrp, ligand binding domain CDA09_06500 5677e82173bc855f062fd0731589045d 155 SUPERFAMILY SSF46785 2 62 9.12E-20 T 01-11-2018 IPR036390 Winged helix DNA-binding domain superfamily CDA09_01625 f216354b68d0632408aca6e9adebced7 1087 Gene3D G3DSA:3.30.450.20 391 519 4.1E-12 T 01-11-2018 CDA09_01625 f216354b68d0632408aca6e9adebced7 1087 Pfam PF00672 HAMP domain 331 381 1.2E-9 T 01-11-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 CDA09_01625 f216354b68d0632408aca6e9adebced7 1087 Pfam PF13426 PAS domain 414 509 1.6E-4 T 01-11-2018 IPR000014 PAS domain CDA09_01625 f216354b68d0632408aca6e9adebced7 1087 Gene3D G3DSA:3.20.20.450 694 945 1.6E-100 T 01-11-2018 IPR035919 EAL domain superfamily CDA09_01625 f216354b68d0632408aca6e9adebced7 1087 Gene3D G3DSA:1.20.1480.50 296 390 4.6E-8 T 01-11-2018 CDA09_01625 f216354b68d0632408aca6e9adebced7 1087 SMART SM00448 959 1071 2.3E-26 T 01-11-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 CDA09_01625 f216354b68d0632408aca6e9adebced7 1087 SUPERFAMILY SSF52172 959 1080 6.69E-33 T 01-11-2018 IPR011006 CheY-like superfamily CDA09_01625 f216354b68d0632408aca6e9adebced7 1087 Gene3D G3DSA:3.30.450.20 56 202 1.0E-25 T 01-11-2018 CDA09_01625 f216354b68d0632408aca6e9adebced7 1087 SUPERFAMILY SSF55785 417 517 7.91E-9 T 01-11-2018 IPR035965 PAS domain superfamily CDA09_01625 f216354b68d0632408aca6e9adebced7 1087 SMART SM00304 331 384 4.5E-10 T 01-11-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 CDA09_01625 f216354b68d0632408aca6e9adebced7 1087 SUPERFAMILY SSF141868 698 944 3.27E-90 T 01-11-2018 IPR035919 EAL domain superfamily CDA09_01625 f216354b68d0632408aca6e9adebced7 1087 Pfam PF00563 EAL domain 698 932 5.6E-73 T 01-11-2018 IPR001633 EAL domain CDA09_01625 f216354b68d0632408aca6e9adebced7 1087 Pfam PF00072 Response regulator receiver domain 962 1072 3.7E-23 T 01-11-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 CDA09_01625 f216354b68d0632408aca6e9adebced7 1087 Pfam PF02743 Cache domain 67 249 1.0E-15 T 01-11-2018 IPR033479 Double Cache domain 1 CDA09_01625 f216354b68d0632408aca6e9adebced7 1087 Gene3D G3DSA:3.30.70.270 520 693 2.3E-45 T 01-11-2018 CDA09_01625 f216354b68d0632408aca6e9adebced7 1087 SUPERFAMILY SSF55073 526 682 5.96E-36 T 01-11-2018 IPR029787 Nucleotide cyclase CDA09_01625 f216354b68d0632408aca6e9adebced7 1087 Pfam PF00990 Diguanylate cyclase, GGDEF domain 521 676 1.2E-30 T 01-11-2018 IPR000160 GGDEF domain CDA09_01625 f216354b68d0632408aca6e9adebced7 1087 SUPERFAMILY SSF158472 331 381 5.62E-7 T 01-11-2018 CDA09_01625 f216354b68d0632408aca6e9adebced7 1087 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 517 678 4.2E-24 T 01-11-2018 IPR000160 GGDEF domain CDA09_01625 f216354b68d0632408aca6e9adebced7 1087 SMART SM00052 691 937 5.9E-122 T 01-11-2018 IPR001633 EAL domain CDA09_01625 f216354b68d0632408aca6e9adebced7 1087 Gene3D G3DSA:3.40.50.2300 951 1083 5.3E-33 T 01-11-2018 CDA09_01625 f216354b68d0632408aca6e9adebced7 1087 SMART SM00267 510 681 9.1E-40 T 01-11-2018 IPR000160 GGDEF domain CDA09_02650 fbcf46f791c2d7d6857f4eb34d97d8e9 282 Gene3D G3DSA:3.40.1010.10 14 131 4.5E-45 T 01-11-2018 IPR014777 Tetrapyrrole methylase, subdomain 1 GO:0008168 Reactome: R-HSA-5358493 CDA09_02650 fbcf46f791c2d7d6857f4eb34d97d8e9 282 ProSitePatterns PS00839 Uroporphyrin-III C-methyltransferase signature 1. 21 35 - T 01-11-2018 IPR003043 Uroporphiryn-III C-methyltransferase, conserved site GO:0008168|GO:0055114 KEGG: 00860+4.99.1.4+1.3.1.76+2.1.1.107|MetaCyc: PWY-5194|MetaCyc: PWY-5196|MetaCyc: PWY-7377 CDA09_02650 fbcf46f791c2d7d6857f4eb34d97d8e9 282 TIGRFAM TIGR01469 cobA_cysG_Cterm: uroporphyrinogen-III C-methyltransferase 16 249 1.7E-92 T 01-11-2018 IPR006366 Uroporphyrin-III C-methyltransferase GO:0008168|GO:0019354 KEGG: 00860+4.99.1.4+1.3.1.76+2.1.1.107|MetaCyc: PWY-5194|MetaCyc: PWY-5196|MetaCyc: PWY-7377 CDA09_02650 fbcf46f791c2d7d6857f4eb34d97d8e9 282 ProSitePatterns PS00840 Uroporphyrin-III C-methyltransferase signature 2. 96 129 - T 01-11-2018 IPR003043 Uroporphiryn-III C-methyltransferase, conserved site GO:0008168|GO:0055114 KEGG: 00860+4.99.1.4+1.3.1.76+2.1.1.107|MetaCyc: PWY-5194|MetaCyc: PWY-5196|MetaCyc: PWY-7377 CDA09_02650 fbcf46f791c2d7d6857f4eb34d97d8e9 282 Pfam PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases 17 227 2.5E-52 T 01-11-2018 IPR000878 Tetrapyrrole methylase GO:0008168 Reactome: R-HSA-5358493 CDA09_02650 fbcf46f791c2d7d6857f4eb34d97d8e9 282 Gene3D G3DSA:3.30.950.10 132 268 3.9E-50 T 01-11-2018 IPR014776 Tetrapyrrole methylase, subdomain 2 GO:0008168 Reactome: R-HSA-5358493 CDA09_02650 fbcf46f791c2d7d6857f4eb34d97d8e9 282 SUPERFAMILY SSF53790 13 259 9.42E-83 T 01-11-2018 IPR035996 Tetrapyrrole methylase superfamily GO:0008168 Reactome: R-HSA-5358493 CDA09_03185 eb93886ea08acae22265194f0da8849b 417 SUPERFAMILY SSF53383 7 416 2.39E-184 T 01-11-2018 IPR015424 Pyridoxal phosphate-dependent transferase CDA09_03185 eb93886ea08acae22265194f0da8849b 417 PIRSF PIRSF000412 1 417 2.9E-170 T 01-11-2018 IPR001085 Serine hydroxymethyltransferase GO:0004372|GO:0019264|GO:0030170|GO:0035999 KEGG: 00260+2.1.2.1|KEGG: 00460+2.1.2.1|KEGG: 00630+2.1.2.1|KEGG: 00670+2.1.2.1|KEGG: 00680+2.1.2.1|MetaCyc: PWY-1622|MetaCyc: PWY-181|MetaCyc: PWY-2161|MetaCyc: PWY-2201|MetaCyc: PWY-3661|MetaCyc: PWY-3661-1|MetaCyc: PWY-3841|MetaCyc: PWY-5497|Reactome: R-HSA-196757 CDA09_03185 eb93886ea08acae22265194f0da8849b 417 Hamap MF_00051 Serine hydroxymethyltransferase [glyA]. 7 416 52.703 T 01-11-2018 IPR001085 Serine hydroxymethyltransferase GO:0004372|GO:0019264|GO:0030170|GO:0035999 KEGG: 00260+2.1.2.1|KEGG: 00460+2.1.2.1|KEGG: 00630+2.1.2.1|KEGG: 00670+2.1.2.1|KEGG: 00680+2.1.2.1|MetaCyc: PWY-1622|MetaCyc: PWY-181|MetaCyc: PWY-2161|MetaCyc: PWY-2201|MetaCyc: PWY-3661|MetaCyc: PWY-3661-1|MetaCyc: PWY-3841|MetaCyc: PWY-5497|Reactome: R-HSA-196757 CDA09_03185 eb93886ea08acae22265194f0da8849b 417 ProSitePatterns PS00096 Serine hydroxymethyltransferase pyridoxal-phosphate attachment site. 221 237 - T 01-11-2018 IPR019798 Serine hydroxymethyltransferase, pyridoxal phosphate binding site GO:0030170 KEGG: 00260+2.1.2.1|KEGG: 00460+2.1.2.1|KEGG: 00630+2.1.2.1|KEGG: 00670+2.1.2.1|KEGG: 00680+2.1.2.1|MetaCyc: PWY-1622|MetaCyc: PWY-181|MetaCyc: PWY-2161|MetaCyc: PWY-2201|MetaCyc: PWY-3661|MetaCyc: PWY-3661-1|MetaCyc: PWY-3841|MetaCyc: PWY-5497|Reactome: R-HSA-196757 CDA09_03185 eb93886ea08acae22265194f0da8849b 417 Gene3D G3DSA:3.40.640.10 37 288 3.4E-185 T 01-11-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 CDA09_03185 eb93886ea08acae22265194f0da8849b 417 Gene3D G3DSA:3.90.1150.10 11 394 3.4E-185 T 01-11-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 CDA09_03185 eb93886ea08acae22265194f0da8849b 417 Pfam PF00464 Serine hydroxymethyltransferase 10 385 2.0E-179 T 01-11-2018 IPR039429 Serine hydroxymethyltransferase-like domain KEGG: 00260+2.1.2.1|KEGG: 00460+2.1.2.1|KEGG: 00630+2.1.2.1|KEGG: 00670+2.1.2.1|KEGG: 00680+2.1.2.1|MetaCyc: PWY-1622|MetaCyc: PWY-181|MetaCyc: PWY-2161|MetaCyc: PWY-2201|MetaCyc: PWY-3661|MetaCyc: PWY-3661-1|MetaCyc: PWY-3841|MetaCyc: PWY-5497|Reactome: R-HSA-196757 CDA09_20425 d4948879fdc4cd3c9f0384b74ab1c56e 294 TIGRFAM TIGR01474 ubiA_proteo: 4-hydroxybenzoate polyprenyl transferase 13 288 1.1E-102 T 01-11-2018 IPR006370 4-hydroxybenzoate polyprenyltransferase-like GO:0004659|GO:0016021 Reactome: R-HSA-1268020|Reactome: R-HSA-2142789 CDA09_20425 d4948879fdc4cd3c9f0384b74ab1c56e 294 Gene3D G3DSA:1.20.120.1780 170 292 5.1E-11 T 01-11-2018 CDA09_20425 d4948879fdc4cd3c9f0384b74ab1c56e 294 Gene3D G3DSA:1.10.357.140 25 169 7.7E-41 T 01-11-2018 CDA09_20425 d4948879fdc4cd3c9f0384b74ab1c56e 294 Pfam PF01040 UbiA prenyltransferase family 29 273 8.9E-60 T 01-11-2018 IPR000537 UbiA prenyltransferase family GO:0016021|GO:0016765 CDA09_20425 d4948879fdc4cd3c9f0384b74ab1c56e 294 ProSitePatterns PS00943 UbiA prenyltransferase family signature. 68 90 - T 01-11-2018 IPR030470 UbiA prenyltransferase conserved site CDA09_20425 d4948879fdc4cd3c9f0384b74ab1c56e 294 Hamap MF_01635 4-hydroxybenzoate octaprenyltransferase [ubiA]. 6 289 29.32 T 01-11-2018 IPR006370 4-hydroxybenzoate polyprenyltransferase-like GO:0004659|GO:0016021 Reactome: R-HSA-1268020|Reactome: R-HSA-2142789 CDA09_21860 cdb215b1efd9fec28cc08ddc49c0dded 521 Gene3D G3DSA:3.30.300.310 423 521 1.5E-28 T 01-11-2018 CDA09_21860 cdb215b1efd9fec28cc08ddc49c0dded 521 TIGRFAM TIGR02262 benz_CoA_lig: benzoate-CoA ligase family 15 517 1.8E-178 T 01-11-2018 IPR011957 Benzoate-CoA ligase family GO:0005524|GO:0016405 CDA09_21860 cdb215b1efd9fec28cc08ddc49c0dded 521 Gene3D G3DSA:2.30.38.10 316 422 1.0E-37 T 01-11-2018 CDA09_21860 cdb215b1efd9fec28cc08ddc49c0dded 521 Pfam PF00501 AMP-binding enzyme 30 422 4.3E-87 T 01-11-2018 IPR000873 AMP-dependent synthetase/ligase GO:0003824 CDA09_21860 cdb215b1efd9fec28cc08ddc49c0dded 521 Gene3D G3DSA:1.10.10.2900 246 313 2.8E-18 T 01-11-2018 CDA09_21860 cdb215b1efd9fec28cc08ddc49c0dded 521 SUPERFAMILY SSF56801 10 521 1.26E-139 T 01-11-2018 CDA09_21860 cdb215b1efd9fec28cc08ddc49c0dded 521 Pfam PF13193 AMP-binding enzyme C-terminal domain 431 509 1.8E-17 T 01-11-2018 IPR025110 AMP-binding enzyme, C-terminal domain CDA09_21860 cdb215b1efd9fec28cc08ddc49c0dded 521 Gene3D G3DSA:3.40.50.980 11 244 7.2E-54 T 01-11-2018 CDA09_05025 14b3a0a9388195bc6c190bb444996339 226 Gene3D G3DSA:3.90.550.10 1 222 1.0E-53 T 01-11-2018 IPR029044 Nucleotide-diphospho-sugar transferases CDA09_05025 14b3a0a9388195bc6c190bb444996339 226 SUPERFAMILY SSF53448 1 221 1.91E-53 T 01-11-2018 IPR029044 Nucleotide-diphospho-sugar transferases CDA09_05025 14b3a0a9388195bc6c190bb444996339 226 Pfam PF00483 Nucleotidyl transferase 1 138 1.1E-21 T 01-11-2018 IPR005835 Nucleotidyl transferase domain GO:0009058|GO:0016779 CDA09_20410 b45e472506cf80aaca3391188027c135 496 SUPERFAMILY SSF50475 3 331 1.37E-121 T 01-11-2018 CDA09_20410 b45e472506cf80aaca3391188027c135 496 Hamap MF_01636 3-octaprenyl-4-hydroxybenzoate carboxy-lyase [ubiD]. 1 496 72.393 T 01-11-2018 IPR023677 UbiD decarboxylyase, bacteria GO:0005886|GO:0006744|GO:0008694 KEGG: 00130+4.1.1.98|MetaCyc: PWY-5855|MetaCyc: PWY-5856|MetaCyc: PWY-5857|MetaCyc: PWY-6708|MetaCyc: PWY-6978 CDA09_20410 b45e472506cf80aaca3391188027c135 496 SUPERFAMILY SSF143968 332 496 1.27E-66 T 01-11-2018 CDA09_20410 b45e472506cf80aaca3391188027c135 496 Pfam PF01977 3-octaprenyl-4-hydroxybenzoate carboxy-lyase 10 440 2.2E-172 T 01-11-2018 IPR002830 UbiD decarboxylyase family GO:0016831 KEGG: 00130+4.1.1.98|MetaCyc: PWY-5855|MetaCyc: PWY-5856|MetaCyc: PWY-5857|MetaCyc: PWY-6708|MetaCyc: PWY-6978 CDA09_20410 b45e472506cf80aaca3391188027c135 496 Gene3D G3DSA:3.40.1670.10 346 463 2.6E-51 T 01-11-2018 CDA09_20410 b45e472506cf80aaca3391188027c135 496 TIGRFAM TIGR00148 TIGR00148: decarboxylase, UbiD family 6 464 1.2E-170 T 01-11-2018 IPR002830 UbiD decarboxylyase family GO:0016831 KEGG: 00130+4.1.1.98|MetaCyc: PWY-5855|MetaCyc: PWY-5856|MetaCyc: PWY-5857|MetaCyc: PWY-6708|MetaCyc: PWY-6978 CDA09_20410 b45e472506cf80aaca3391188027c135 496 Gene3D G3DSA:1.20.5.570 464 496 1.2E-14 T 01-11-2018 CDA09_21815 b3cc21398635cd604ec1e22dfd010560 160 SUPERFAMILY SSF53067 5 147 2.36E-18 T 01-11-2018 CDA09_21815 b3cc21398635cd604ec1e22dfd010560 160 Pfam PF01869 BadF/BadG/BcrA/BcrD ATPase family 2 145 1.4E-38 T 01-11-2018 IPR002731 ATPase, BadF/BadG/BcrA/BcrD type Reactome: R-HSA-446210 CDA09_21815 b3cc21398635cd604ec1e22dfd010560 160 Gene3D G3DSA:3.30.420.40 5 128 1.6E-47 T 01-11-2018 CDA09_21815 b3cc21398635cd604ec1e22dfd010560 160 TIGRFAM TIGR00241 CoA_E_activ: putative CoA-substrate-specific enzyme activase 2 143 5.3E-45 T 01-11-2018 IPR008275 CoA enzyme activase CDA09_21815 b3cc21398635cd604ec1e22dfd010560 160 Gene3D G3DSA:3.30.420.40 129 145 1.6E-47 T 01-11-2018 CDA09_20315 6cc95062fc9c9c836b764a63d62b408f 374 Hamap MF_01212 Deoxyguanosinetriphosphate triphosphohydrolase-like protein. 4 368 38.514 T 01-11-2018 IPR023023 dNTP triphosphohydrolase, type 2 GO:0016793 CDA09_20315 6cc95062fc9c9c836b764a63d62b408f 374 SMART SM00471 60 204 1.1E-10 T 01-11-2018 IPR003607 HD/PDEase domain CDA09_20315 6cc95062fc9c9c836b764a63d62b408f 374 Gene3D G3DSA:1.10.3210.10 1 369 2.8E-134 T 01-11-2018 CDA09_20315 6cc95062fc9c9c836b764a63d62b408f 374 SUPERFAMILY SSF109604 15 368 4.71E-90 T 01-11-2018 CDA09_20315 6cc95062fc9c9c836b764a63d62b408f 374 TIGRFAM TIGR01353 dGTP_triPase: putative dGTPase 26 162 7.4E-59 T 01-11-2018 IPR006261 dNTP triphosphohydrolase GO:0016793 CDA09_20315 6cc95062fc9c9c836b764a63d62b408f 374 Pfam PF13286 Phosphohydrolase-associated domain 281 366 2.0E-27 T 01-11-2018 IPR026875 Phosphohydrolase-associated domain CDA09_20315 6cc95062fc9c9c836b764a63d62b408f 374 Pfam PF01966 HD domain 64 194 1.3E-14 T 01-11-2018 IPR006674 HD domain CDA09_09080 321128cc460f27c86875d88f83824a31 399 Gene3D G3DSA:3.10.129.10 248 375 7.2E-25 T 01-11-2018 CDA09_09080 321128cc460f27c86875d88f83824a31 399 Gene3D G3DSA:3.10.129.10 15 217 4.0E-34 T 01-11-2018 CDA09_09080 321128cc460f27c86875d88f83824a31 399 SUPERFAMILY SSF54637 242 368 2.05E-16 T 01-11-2018 IPR029069 HotDog domain superfamily CDA09_09080 321128cc460f27c86875d88f83824a31 399 SUPERFAMILY SSF54637 30 219 6.58E-12 T 01-11-2018 IPR029069 HotDog domain superfamily CDA09_09080 321128cc460f27c86875d88f83824a31 399 Pfam PF13452 N-terminal half of MaoC dehydratase 30 81 1.2E-5 T 01-11-2018 IPR039569 N-terminal of MaoC-like dehydratase Reactome: R-HSA-193368|Reactome: R-HSA-2046106|Reactome: R-HSA-389887|Reactome: R-HSA-390247|Reactome: R-HSA-9033241|Reactome: R-HSA-9033500 CDA09_02995 f37d71f0afbed041691348cd0d69d2bc 271 Pfam PF00392 Bacterial regulatory proteins, gntR family 13 75 9.5E-20 T 01-11-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 CDA09_02995 f37d71f0afbed041691348cd0d69d2bc 271 Gene3D G3DSA:1.20.120.530 98 242 9.3E-30 T 01-11-2018 IPR008920 Transcription regulator FadR/GntR, C-terminal CDA09_02995 f37d71f0afbed041691348cd0d69d2bc 271 SMART SM00345 16 75 5.3E-21 T 01-11-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 CDA09_02995 f37d71f0afbed041691348cd0d69d2bc 271 SMART SM00895 107 233 5.9E-24 T 01-11-2018 IPR011711 GntR, C-terminal CDA09_02995 f37d71f0afbed041691348cd0d69d2bc 271 Gene3D G3DSA:1.10.10.10 2 75 2.1E-21 T 01-11-2018 IPR036388 Winged helix-like DNA-binding domain superfamily CDA09_02995 f37d71f0afbed041691348cd0d69d2bc 271 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 35 49 5.5E-9 T 01-11-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 CDA09_02995 f37d71f0afbed041691348cd0d69d2bc 271 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 49 65 5.5E-9 T 01-11-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 CDA09_02995 f37d71f0afbed041691348cd0d69d2bc 271 Pfam PF07729 FCD domain 107 231 1.3E-23 T 01-11-2018 IPR011711 GntR, C-terminal CDA09_02995 f37d71f0afbed041691348cd0d69d2bc 271 SUPERFAMILY SSF46785 9 79 3.8E-19 T 01-11-2018 IPR036390 Winged helix DNA-binding domain superfamily CDA09_02995 f37d71f0afbed041691348cd0d69d2bc 271 SUPERFAMILY SSF48008 104 238 5.49E-28 T 01-11-2018 IPR008920 Transcription regulator FadR/GntR, C-terminal CDA09_14930 778dccda778a2d7a738413ca394c103a 318 Gene3D G3DSA:1.10.8.10 27 118 2.6E-8 T 01-11-2018 CDA09_14930 778dccda778a2d7a738413ca394c103a 318 Gene3D G3DSA:3.40.50.150 119 291 2.9E-47 T 01-11-2018 CDA09_14930 778dccda778a2d7a738413ca394c103a 318 SUPERFAMILY SSF53335 29 294 6.93E-54 T 01-11-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase CDA09_14930 778dccda778a2d7a738413ca394c103a 318 ProSitePatterns PS00092 N-6 Adenine-specific DNA methylases signature. 219 225 - T 01-11-2018 IPR002052 DNA methylase, N-6 adenine-specific, conserved site GO:0003676|GO:0008168|GO:0032259 CDA09_14930 778dccda778a2d7a738413ca394c103a 318 Hamap MF_02125 50S ribosomal protein L3 glutamine methyltransferase [prmB]. 19 315 50.318 T 01-11-2018 IPR017127 Ribosomal protein L3-specific, glutamine-N5-methyltransferase GO:0005622|GO:0009007|GO:0032775 CDA09_14930 778dccda778a2d7a738413ca394c103a 318 TIGRFAM TIGR00536 hemK_fam: methyltransferase, HemK family 28 284 1.7E-64 T 01-11-2018 IPR004556 Modification methylase HemK GO:0006479|GO:0008276 CDA09_14930 778dccda778a2d7a738413ca394c103a 318 TIGRFAM TIGR03533 L3_gln_methyl: protein-(glutamine-N5) methyltransferase, ribosomal protein L3-specific 26 309 1.9E-123 T 01-11-2018 IPR017127 Ribosomal protein L3-specific, glutamine-N5-methyltransferase GO:0005622|GO:0009007|GO:0032775 CDA09_14930 778dccda778a2d7a738413ca394c103a 318 PIRSF PIRSF037167 12 317 1.5E-128 T 01-11-2018 IPR017127 Ribosomal protein L3-specific, glutamine-N5-methyltransferase GO:0005622|GO:0009007|GO:0032775 CDA09_14930 778dccda778a2d7a738413ca394c103a 318 Pfam PF05175 Methyltransferase small domain 148 232 4.4E-16 T 01-11-2018 IPR007848 Methyltransferase small domain GO:0008168 CDA09_12325 47e76059a11413034e5060ecb404f160 302 Gene3D G3DSA:1.10.1580.10 177 270 4.7E-20 T 01-11-2018 IPR023179 GTP-binding protein, orthogonal bundle domain superfamily CDA09_12325 47e76059a11413034e5060ecb404f160 302 TIGRFAM TIGR03596 GTPase_YlqF: ribosome biogenesis GTP-binding protein YlqF 3 277 1.4E-91 T 01-11-2018 IPR019991 GTP-binding protein, ribosome biogenesis CDA09_12325 47e76059a11413034e5060ecb404f160 302 SUPERFAMILY SSF52540 9 187 3.93E-35 T 01-11-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CDA09_12325 47e76059a11413034e5060ecb404f160 302 Pfam PF01926 50S ribosome-binding GTPase 119 184 1.9E-15 T 01-11-2018 IPR006073 GTP binding domain GO:0005525 CDA09_12325 47e76059a11413034e5060ecb404f160 302 PIRSF PIRSF006230 1 282 1.5E-90 T 01-11-2018 IPR016478 GTPase, MTG1 CDA09_12325 47e76059a11413034e5060ecb404f160 302 Gene3D G3DSA:3.40.50.300 3 173 6.5E-38 T 01-11-2018 CDA09_02685 34709a2acbe9a57c66f71792611b34ad 468 Pfam PF13183 4Fe-4S dicluster domain 307 374 3.9E-10 T 01-11-2018 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain CDA09_02685 34709a2acbe9a57c66f71792611b34ad 468 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 310 321 - T 01-11-2018 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site CDA09_02685 34709a2acbe9a57c66f71792611b34ad 468 Gene3D G3DSA:3.40.50.10420 118 292 7.2E-12 T 01-11-2018 IPR024185 5-formyltetrahydrofolate cyclo-ligase-like domain superfamily CDA09_02685 34709a2acbe9a57c66f71792611b34ad 468 Pfam PF11870 Domain of unknown function (DUF3390) 385 464 8.9E-11 T 01-11-2018 IPR024569 4Fe-4S binding protein, C-terminal CDA09_02685 34709a2acbe9a57c66f71792611b34ad 468 Pfam PF02589 LUD domain 68 292 3.6E-53 T 01-11-2018 IPR003741 LUD domain CDA09_02685 34709a2acbe9a57c66f71792611b34ad 468 SUPERFAMILY SSF100950 63 293 1.63E-38 T 01-11-2018 IPR037171 NagB/RpiA transferase-like CDA09_02685 34709a2acbe9a57c66f71792611b34ad 468 SUPERFAMILY SSF46548 269 392 1.03E-19 T 01-11-2018 IPR009051 Alpha-helical ferredoxin GO:0051536 CDA09_02685 34709a2acbe9a57c66f71792611b34ad 468 TIGRFAM TIGR00273 TIGR00273: iron-sulfur cluster-binding protein 16 450 1.8E-148 T 01-11-2018 IPR004452 4Fe-4S binding protein GO:0019516 CDA09_02685 34709a2acbe9a57c66f71792611b34ad 468 Gene3D G3DSA:1.10.1060.10 293 399 3.6E-5 T 01-11-2018 IPR009051 Alpha-helical ferredoxin GO:0051536 CDA09_06020 50fd449a2281719147005abdeec95bbf 107 Gene3D G3DSA:2.60.120.10 1 107 1.3E-40 T 01-11-2018 IPR014710 RmlC-like jelly roll fold CDA09_06020 50fd449a2281719147005abdeec95bbf 107 Hamap MF_01537 Pyrimidine/purine nucleoside phosphorylase [ppnP]. 13 107 27.702 T 01-11-2018 IPR009664 Pyrimidine/purine nucleoside phosphorylase KEGG: 00230+2.4.2.15|KEGG: 00240+2.4.2.4+2.4.2.3+2.4.2.2|KEGG: 00983+2.4.2.4+2.4.2.3|MetaCyc: PWY-5532|MetaCyc: PWY-7181 CDA09_06020 50fd449a2281719147005abdeec95bbf 107 SUPERFAMILY SSF51182 15 106 5.09E-33 T 01-11-2018 IPR011051 RmlC-like cupin domain superfamily CDA09_06020 50fd449a2281719147005abdeec95bbf 107 Pfam PF06865 Protein of unknown function (DUF1255) 15 106 2.6E-36 T 01-11-2018 IPR009664 Pyrimidine/purine nucleoside phosphorylase KEGG: 00230+2.4.2.15|KEGG: 00240+2.4.2.4+2.4.2.3+2.4.2.2|KEGG: 00983+2.4.2.4+2.4.2.3|MetaCyc: PWY-5532|MetaCyc: PWY-7181 CDA09_22540 055ef97f8d2ecb30a91bd7f85e3d89d3 126 Gene3D G3DSA:2.30.30.110 12 124 5.0E-28 T 01-11-2018 IPR011067 Plasmid maintenance toxin/Cell growth inhibitor CDA09_22540 055ef97f8d2ecb30a91bd7f85e3d89d3 126 SUPERFAMILY SSF50118 9 122 5.01E-23 T 01-11-2018 CDA09_22540 055ef97f8d2ecb30a91bd7f85e3d89d3 126 Pfam PF02452 PemK-like, MazF-like toxin of type II toxin-antitoxin system 13 121 1.4E-17 T 01-11-2018 IPR003477 mRNA interferase PemK-like GO:0003677 CDA09_02465 a49bafa650df618449aea03697da9cb7 484 Pfam PF10150 Ribonuclease E/G family 117 388 1.5E-102 T 01-11-2018 IPR019307 RNA-binding protein AU-1/Ribonuclease E/G GO:0003723 CDA09_02465 a49bafa650df618449aea03697da9cb7 484 Gene3D G3DSA:2.40.50.140 31 121 5.4E-29 T 01-11-2018 CDA09_02465 a49bafa650df618449aea03697da9cb7 484 TIGRFAM TIGR00757 RNaseEG: ribonuclease, Rne/Rng family 13 421 4.2E-151 T 01-11-2018 IPR004659 Ribonuclease E/G GO:0003723|GO:0004540|GO:0006396 CDA09_02465 a49bafa650df618449aea03697da9cb7 484 SUPERFAMILY SSF50249 39 121 3.32E-18 T 01-11-2018 IPR012340 Nucleic acid-binding, OB-fold CDA09_02465 a49bafa650df618449aea03697da9cb7 484 SMART SM00316 37 115 4.3E-8 T 01-11-2018 IPR022967 RNA-binding domain, S1 CDA09_02465 a49bafa650df618449aea03697da9cb7 484 Gene3D G3DSA:3.40.1260.20 397 484 3.4E-6 T 01-11-2018 CDA09_17480 5ae6d6c62c574110da8f8b83f1c894ca 530 SUPERFAMILY SSF51004 118 523 9.02E-80 T 01-11-2018 IPR011048 Cytochrome cd1-nitrite reductase-like, haem d1 domain superfamily CDA09_17480 5ae6d6c62c574110da8f8b83f1c894ca 530 SUPERFAMILY SSF46626 14 111 1.43E-17 T 01-11-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 CDA09_17480 5ae6d6c62c574110da8f8b83f1c894ca 530 Gene3D G3DSA:1.10.760.10 24 111 2.9E-17 T 01-11-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 CDA09_17480 5ae6d6c62c574110da8f8b83f1c894ca 530 Gene3D G3DSA:2.140.10.20 116 525 3.0E-111 T 01-11-2018 IPR003143 Cytochrome cd1-nitrite reductase, C-terminal domain superfamily CDA09_17480 5ae6d6c62c574110da8f8b83f1c894ca 530 Pfam PF02239 Cytochrome D1 heme domain 145 521 3.2E-100 T 01-11-2018 CDA09_17480 5ae6d6c62c574110da8f8b83f1c894ca 530 Pfam PF13442 Cytochrome C oxidase, cbb3-type, subunit III 39 108 1.5E-11 T 01-11-2018 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 Reactome: R-HSA-111457|Reactome: R-HSA-111458|Reactome: R-HSA-111459|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 CDA09_20060 6659e2cad981fd9c6e5542387766be18 305 Hamap MF_00024 Cobalamin biosynthesis protein CbiB [cbiB]. 1 305 106.967 T 01-11-2018 IPR004485 Cobalamin biosynthesis CobD/CbiB GO:0009236|GO:0016021|GO:0048472 CDA09_20060 6659e2cad981fd9c6e5542387766be18 305 TIGRFAM TIGR00380 cobD: cobalamin biosynthesis protein CobD 6 259 2.4E-54 T 01-11-2018 IPR004485 Cobalamin biosynthesis CobD/CbiB GO:0009236|GO:0016021|GO:0048472 CDA09_20060 6659e2cad981fd9c6e5542387766be18 305 Pfam PF03186 CobD/Cbib protein 8 283 2.1E-93 T 01-11-2018 IPR004485 Cobalamin biosynthesis CobD/CbiB GO:0009236|GO:0016021|GO:0048472 CDA09_19105 acd9b2df0b211837abc57feb19a7b437 82 Gene3D G3DSA:3.40.1620.40 1 48 6.2E-9 T 01-11-2018 CDA09_19105 acd9b2df0b211837abc57feb19a7b437 82 Pfam PF02604 Antitoxin Phd_YefM, type II toxin-antitoxin system 1 49 2.5E-12 T 01-11-2018 IPR006442 Type II toxin-antitoxin system, antitoxin Phd/YefM CDA09_19105 acd9b2df0b211837abc57feb19a7b437 82 TIGRFAM TIGR01552 phd_fam: prevent-host-death family protein 3 47 5.6E-6 T 01-11-2018 CDA09_19105 acd9b2df0b211837abc57feb19a7b437 82 SUPERFAMILY SSF143120 1 49 3.01E-13 T 01-11-2018 IPR036165 YefM-like superfamily CDA09_09965 889255ab665b993717422cdd2fe86e7e 342 Hamap MF_01656 4-hydroxy-2-oxovalerate aldolase [mhpE]. 1 342 215.682 T 01-11-2018 IPR017629 4-hydroxy-2-oxovalerate aldolase GO:0008701|GO:0019439 KEGG: 00360+4.1.3.39|KEGG: 00362+4.1.3.39|KEGG: 00621+4.1.3.39|KEGG: 00622+4.1.3.39|MetaCyc: PWY-5162 CDA09_09965 889255ab665b993717422cdd2fe86e7e 342 TIGRFAM TIGR03217 4OH_2_O_val_ald: 4-hydroxy-2-oxovalerate aldolase 6 339 1.6E-169 T 01-11-2018 IPR017629 4-hydroxy-2-oxovalerate aldolase GO:0008701|GO:0019439 KEGG: 00360+4.1.3.39|KEGG: 00362+4.1.3.39|KEGG: 00621+4.1.3.39|KEGG: 00622+4.1.3.39|MetaCyc: PWY-5162 CDA09_09965 889255ab665b993717422cdd2fe86e7e 342 Pfam PF00682 HMGL-like 8 264 2.0E-57 T 01-11-2018 IPR000891 Pyruvate carboxyltransferase GO:0003824 CDA09_09965 889255ab665b993717422cdd2fe86e7e 342 ProDom PD005364 ALDOLASE 4-HYDROXY-2-OXOVALERATE LYASE PYRUVATE 4.1.3.- PLASMID HMG-COA LYASE-LIKE TRANSFERASE HOA 274 331 7.0E-26 T 01-11-2018 IPR012425 DmpG-like communication GO:0016833|GO:0019439 KEGG: 00360+4.1.3.39|KEGG: 00362+4.1.3.39|KEGG: 00621+4.1.3.39|KEGG: 00622+4.1.3.39|MetaCyc: PWY-5162 CDA09_09965 889255ab665b993717422cdd2fe86e7e 342 Gene3D G3DSA:1.10.8.60 277 342 2.8E-30 T 01-11-2018 CDA09_09965 889255ab665b993717422cdd2fe86e7e 342 SUPERFAMILY SSF51569 5 276 7.14E-68 T 01-11-2018 CDA09_09965 889255ab665b993717422cdd2fe86e7e 342 Gene3D G3DSA:3.20.20.70 4 270 2.2E-85 T 01-11-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 CDA09_09965 889255ab665b993717422cdd2fe86e7e 342 Pfam PF07836 DmpG-like communication domain 276 337 4.5E-30 T 01-11-2018 IPR012425 DmpG-like communication GO:0016833|GO:0019439 KEGG: 00360+4.1.3.39|KEGG: 00362+4.1.3.39|KEGG: 00621+4.1.3.39|KEGG: 00622+4.1.3.39|MetaCyc: PWY-5162 CDA09_09965 889255ab665b993717422cdd2fe86e7e 342 SUPERFAMILY SSF89000 290 339 7.85E-16 T 01-11-2018 CDA09_18210 f13448036ac53c2114f799200cd54645 503 Pfam PF08245 Mur ligase middle domain 108 317 9.2E-46 T 01-11-2018 IPR013221 Mur ligase, central GO:0005524|GO:0009058 CDA09_18210 f13448036ac53c2114f799200cd54645 503 SUPERFAMILY SSF53623 99 337 1.57E-73 T 01-11-2018 IPR036565 Mur-like, catalytic domain superfamily GO:0005524|GO:0009058 Reactome: R-HSA-196757 CDA09_18210 f13448036ac53c2114f799200cd54645 503 Gene3D G3DSA:3.40.1390.10 4 98 2.7E-20 T 01-11-2018 CDA09_18210 f13448036ac53c2114f799200cd54645 503 Pfam PF01225 Mur ligase family, catalytic domain 22 92 8.1E-9 T 01-11-2018 IPR000713 Mur ligase, N-terminal catalytic domain GO:0005524|GO:0009058 CDA09_18210 f13448036ac53c2114f799200cd54645 503 Hamap MF_00208 UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase [murE]. 4 491 32.807 T 01-11-2018 IPR005761 UDP-N-acetylmuramoylalanyl-D-glutamate-2,6-diaminopimelate ligase GO:0005524|GO:0005737|GO:0008360|GO:0016881|GO:0051301 CDA09_18210 f13448036ac53c2114f799200cd54645 503 SUPERFAMILY SSF53244 339 494 6.56E-47 T 01-11-2018 IPR036615 Mur ligase, C-terminal domain superfamily GO:0005524|GO:0009058|GO:0016874 Reactome: R-HSA-196757 CDA09_18210 f13448036ac53c2114f799200cd54645 503 Pfam PF02875 Mur ligase family, glutamate ligase domain 339 425 1.6E-22 T 01-11-2018 IPR004101 Mur ligase, C-terminal GO:0005524|GO:0009058|GO:0016874 CDA09_18210 f13448036ac53c2114f799200cd54645 503 Gene3D G3DSA:3.40.1190.10 99 340 4.4E-79 T 01-11-2018 IPR036565 Mur-like, catalytic domain superfamily GO:0005524|GO:0009058 Reactome: R-HSA-196757 CDA09_18210 f13448036ac53c2114f799200cd54645 503 TIGRFAM TIGR01085 murE: UDP-N-acetylmuramyl-tripeptide synthetase 22 491 2.3E-146 T 01-11-2018 IPR005761 UDP-N-acetylmuramoylalanyl-D-glutamate-2,6-diaminopimelate ligase GO:0005524|GO:0005737|GO:0008360|GO:0016881|GO:0051301 CDA09_18210 f13448036ac53c2114f799200cd54645 503 Gene3D G3DSA:3.90.190.20 341 497 2.4E-54 T 01-11-2018 IPR036615 Mur ligase, C-terminal domain superfamily GO:0005524|GO:0009058|GO:0016874 Reactome: R-HSA-196757 CDA09_18210 f13448036ac53c2114f799200cd54645 503 SUPERFAMILY SSF63418 18 97 2.09E-17 T 01-11-2018 IPR035911 MurE/MurF, N-terminal CDA09_19645 91ea6961a4ad0247503d67654031a6e8 640 SUPERFAMILY SSF52172 517 636 1.38E-21 T 01-11-2018 IPR011006 CheY-like superfamily CDA09_19645 91ea6961a4ad0247503d67654031a6e8 640 Pfam PF00512 His Kinase A (phospho-acceptor) domain 278 342 3.1E-10 T 01-11-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 CDA09_19645 91ea6961a4ad0247503d67654031a6e8 640 Gene3D G3DSA:3.40.50.2300 515 640 4.2E-19 T 01-11-2018 CDA09_19645 91ea6961a4ad0247503d67654031a6e8 640 PRINTS PR00344 Bacterial sensor protein C-terminal signature 458 476 1.5E-13 T 01-11-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 CDA09_19645 91ea6961a4ad0247503d67654031a6e8 640 PRINTS PR00344 Bacterial sensor protein C-terminal signature 423 437 1.5E-13 T 01-11-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 CDA09_19645 91ea6961a4ad0247503d67654031a6e8 640 PRINTS PR00344 Bacterial sensor protein C-terminal signature 482 495 1.5E-13 T 01-11-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 CDA09_19645 91ea6961a4ad0247503d67654031a6e8 640 PRINTS PR00344 Bacterial sensor protein C-terminal signature 441 451 1.5E-13 T 01-11-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 CDA09_19645 91ea6961a4ad0247503d67654031a6e8 640 Gene3D G3DSA:3.30.565.10 355 505 3.7E-36 T 01-11-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily CDA09_19645 91ea6961a4ad0247503d67654031a6e8 640 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 388 497 2.7E-24 T 01-11-2018 IPR003594 Histidine kinase/HSP90-like ATPase CDA09_19645 91ea6961a4ad0247503d67654031a6e8 640 SMART SM00387 387 498 8.7E-30 T 01-11-2018 IPR003594 Histidine kinase/HSP90-like ATPase CDA09_19645 91ea6961a4ad0247503d67654031a6e8 640 SMART SM00388 278 343 1.8E-13 T 01-11-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 CDA09_19645 91ea6961a4ad0247503d67654031a6e8 640 SMART SM00448 518 632 1.7E-17 T 01-11-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 CDA09_19645 91ea6961a4ad0247503d67654031a6e8 640 SUPERFAMILY SSF158472 200 249 2.35E-5 T 01-11-2018 CDA09_19645 91ea6961a4ad0247503d67654031a6e8 640 SMART SM00304 200 252 6.6E-9 T 01-11-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 CDA09_19645 91ea6961a4ad0247503d67654031a6e8 640 Gene3D G3DSA:1.20.1480.50 161 259 1.9E-6 T 01-11-2018 CDA09_19645 91ea6961a4ad0247503d67654031a6e8 640 Gene3D G3DSA:1.10.287.130 264 344 7.9E-16 T 01-11-2018 CDA09_19645 91ea6961a4ad0247503d67654031a6e8 640 Pfam PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) 34 173 1.0E-9 T 01-11-2018 IPR019247 Histidine kinase BarA, N-terminal CDA09_19645 91ea6961a4ad0247503d67654031a6e8 640 SUPERFAMILY SSF55874 332 499 1.44E-40 T 01-11-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily CDA09_19645 91ea6961a4ad0247503d67654031a6e8 640 Pfam PF00072 Response regulator receiver domain 520 632 2.0E-13 T 01-11-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 CDA09_19645 91ea6961a4ad0247503d67654031a6e8 640 SUPERFAMILY SSF47384 264 343 6.87E-15 T 01-11-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 CDA09_08305 92996a3cbc338645a0049467d17f9da3 379 Gene3D G3DSA:3.20.20.70 1 267 4.6E-86 T 01-11-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 CDA09_08305 92996a3cbc338645a0049467d17f9da3 379 TIGRFAM TIGR02660 nifV_homocitr: homocitrate synthase 6 368 5.9E-162 T 01-11-2018 IPR013477 Homocitrate synthase NifV-like GO:0046912|GO:0051188 KEGG: 00300+2.3.3.14|KEGG: 00620+2.3.3.14|MetaCyc: PWY-3081|MetaCyc: PWY-7710 CDA09_08305 92996a3cbc338645a0049467d17f9da3 379 Gene3D G3DSA:1.10.238.260 270 376 2.9E-22 T 01-11-2018 CDA09_08305 92996a3cbc338645a0049467d17f9da3 379 Pfam PF00682 HMGL-like 6 263 9.0E-85 T 01-11-2018 IPR000891 Pyruvate carboxyltransferase GO:0003824 CDA09_08305 92996a3cbc338645a0049467d17f9da3 379 SUPERFAMILY SSF51569 3 279 2.56E-84 T 01-11-2018 CDA09_08305 92996a3cbc338645a0049467d17f9da3 379 ProSitePatterns PS00816 Alpha-isopropylmalate and homocitrate synthases signature 2. 192 205 - T 01-11-2018 IPR002034 Alpha-isopropylmalate/homocitrate synthase, conserved site GO:0019752|GO:0046912 KEGG: 00290+2.3.3.13|KEGG: 00620+2.3.3.13|MetaCyc: PWY-6871 CDA09_17900 d252f5a5a6a490844069cdc67eb7f92c 362 Pfam PF02653 Branched-chain amino acid transport system / permease component 46 339 4.3E-46 T 01-11-2018 IPR001851 ABC transporter, permease GO:0016020|GO:0022857|GO:0055085 CDA09_18590 3adbb11a13f86c14d9fc3d81bdd54bf4 301 Gene3D G3DSA:1.10.10.10 6 88 3.7E-23 T 01-11-2018 IPR036388 Winged helix-like DNA-binding domain superfamily CDA09_18590 3adbb11a13f86c14d9fc3d81bdd54bf4 301 SUPERFAMILY SSF46785 4 114 4.31E-23 T 01-11-2018 IPR036390 Winged helix DNA-binding domain superfamily CDA09_18590 3adbb11a13f86c14d9fc3d81bdd54bf4 301 Gene3D G3DSA:3.40.190.290 94 290 1.1E-30 T 01-11-2018 CDA09_18590 3adbb11a13f86c14d9fc3d81bdd54bf4 301 Pfam PF03466 LysR substrate binding domain 93 289 7.3E-30 T 01-11-2018 IPR005119 LysR, substrate-binding CDA09_18590 3adbb11a13f86c14d9fc3d81bdd54bf4 301 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 7 66 9.4E-20 T 01-11-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 CDA09_18590 3adbb11a13f86c14d9fc3d81bdd54bf4 301 SUPERFAMILY SSF53850 93 292 4.34E-34 T 01-11-2018 CDA09_23105 2e73ed931aec97af61fb9a436ed7c163 99 Gene3D G3DSA:3.10.129.10 2 98 5.9E-19 T 01-11-2018 CDA09_23105 2e73ed931aec97af61fb9a436ed7c163 99 SUPERFAMILY SSF54637 6 96 2.55E-12 T 01-11-2018 IPR029069 HotDog domain superfamily CDA09_23105 2e73ed931aec97af61fb9a436ed7c163 99 Pfam PF07977 FabA-like domain 6 45 1.0E-5 T 01-11-2018 IPR013114 Beta-hydroxydecanoyl thiol ester dehydrase, FabA/FabZ KEGG: 00061+4.2.1.59|KEGG: 00780+4.2.1.59|MetaCyc: PWY-5971|MetaCyc: PWY-5973|MetaCyc: PWY-5989|MetaCyc: PWY-5994|MetaCyc: PWY-6113|MetaCyc: PWY-6282|MetaCyc: PWY-6519|MetaCyc: PWY-7388|MetaCyc: PWY-7663|MetaCyc: PWY-7664|MetaCyc: PWY-7858|MetaCyc: PWYG-321 CDA09_16595 52efdca5b73ce939eb96f271f3699eb7 247 Gene3D G3DSA:3.60.140.10 1 247 5.5E-93 T 01-11-2018 IPR038371 Multi-copper polyphenol oxidoreductase superfamily CDA09_16595 52efdca5b73ce939eb96f271f3699eb7 247 TIGRFAM TIGR00726 TIGR00726: YfiH family protein 27 245 2.4E-55 T 01-11-2018 IPR003730 Multi-copper polyphenol oxidoreductase CDA09_16595 52efdca5b73ce939eb96f271f3699eb7 247 Pfam PF02578 Multi-copper polyphenol oxidoreductase laccase 21 244 5.8E-78 T 01-11-2018 IPR003730 Multi-copper polyphenol oxidoreductase CDA09_16595 52efdca5b73ce939eb96f271f3699eb7 247 SUPERFAMILY SSF64438 5 246 4.21E-86 T 01-11-2018 IPR011324 Cytotoxic necrotizing factor-like, catalytic CDA09_07560 a0e6e018cf09335e8de10926f43022ec 412 SUPERFAMILY SSF103473 15 402 1.7E-36 T 01-11-2018 IPR036259 MFS transporter superfamily CDA09_07560 a0e6e018cf09335e8de10926f43022ec 412 Pfam PF07690 Major Facilitator Superfamily 20 320 1.0E-17 T 01-11-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 CDA09_07560 a0e6e018cf09335e8de10926f43022ec 412 Gene3D G3DSA:1.20.1250.20 13 392 1.1E-27 T 01-11-2018 CDA09_15850 6e281d201ef095837e26921e11e13e12 282 Gene3D G3DSA:1.25.40.10 121 281 4.1E-26 T 01-11-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 CDA09_15850 6e281d201ef095837e26921e11e13e12 282 SUPERFAMILY SSF48452 142 270 1.71E-21 T 01-11-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 CDA09_15850 6e281d201ef095837e26921e11e13e12 282 SMART SM00028 213 246 0.65 T 01-11-2018 IPR019734 Tetratricopeptide repeat GO:0005515 CDA09_15850 6e281d201ef095837e26921e11e13e12 282 SMART SM00028 146 178 99.0 T 01-11-2018 IPR019734 Tetratricopeptide repeat GO:0005515 CDA09_15850 6e281d201ef095837e26921e11e13e12 282 SMART SM00028 179 212 28.0 T 01-11-2018 IPR019734 Tetratricopeptide repeat GO:0005515 CDA09_15850 6e281d201ef095837e26921e11e13e12 282 SMART SM00028 247 280 430.0 T 01-11-2018 IPR019734 Tetratricopeptide repeat GO:0005515 CDA09_15850 6e281d201ef095837e26921e11e13e12 282 Pfam PF13432 Tetratricopeptide repeat 155 212 1.3E-5 T 01-11-2018 CDA09_15850 6e281d201ef095837e26921e11e13e12 282 Pfam PF13432 Tetratricopeptide repeat 217 272 1.7E-4 T 01-11-2018 CDA09_15850 6e281d201ef095837e26921e11e13e12 282 Pfam PF13411 MerR HTH family regulatory protein 6 70 1.0E-4 T 01-11-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 CDA09_15850 6e281d201ef095837e26921e11e13e12 282 Gene3D G3DSA:1.10.1660.10 1 71 2.6E-6 T 01-11-2018 CDA09_11060 765e5c9035078ff2407782b6839d0a07 464 SUPERFAMILY SSF103378 3 434 4.05E-87 T 01-11-2018 IPR036148 MmgE/PrpD superfamily GO:0016829 CDA09_11060 765e5c9035078ff2407782b6839d0a07 464 Gene3D G3DSA:3.30.1330.120 259 390 8.0E-68 T 01-11-2018 CDA09_11060 765e5c9035078ff2407782b6839d0a07 464 Pfam PF03972 MmgE/PrpD family 3 426 4.4E-77 T 01-11-2018 IPR005656 MmgE/PrpD GO:0016829 CDA09_11060 765e5c9035078ff2407782b6839d0a07 464 Gene3D G3DSA:1.10.4100.10 26 407 8.0E-68 T 01-11-2018 CDA09_12720 78369cc49cd996653f879d425b711c0f 245 Pfam PF00072 Response regulator receiver domain 9 118 2.0E-29 T 01-11-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 CDA09_12720 78369cc49cd996653f879d425b711c0f 245 SMART SM00448 7 118 6.5E-43 T 01-11-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 CDA09_12720 78369cc49cd996653f879d425b711c0f 245 SMART SM00862 158 234 1.5E-26 T 01-11-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 CDA09_12720 78369cc49cd996653f879d425b711c0f 245 SUPERFAMILY SSF52172 6 128 3.98E-41 T 01-11-2018 IPR011006 CheY-like superfamily CDA09_12720 78369cc49cd996653f879d425b711c0f 245 Gene3D G3DSA:1.10.10.10 132 241 5.7E-38 T 01-11-2018 IPR036388 Winged helix-like DNA-binding domain superfamily CDA09_12720 78369cc49cd996653f879d425b711c0f 245 SUPERFAMILY SSF46894 134 236 2.81E-28 T 01-11-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 CDA09_12720 78369cc49cd996653f879d425b711c0f 245 Pfam PF00486 Transcriptional regulatory protein, C terminal 158 234 4.0E-24 T 01-11-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 CDA09_12720 78369cc49cd996653f879d425b711c0f 245 Gene3D G3DSA:3.40.50.2300 1 126 5.2E-40 T 01-11-2018 CDA09_01755 14f0a2af3656b02f925e4aa8a95eccea 287 Gene3D G3DSA:1.10.10.10 1 90 9.1E-23 T 01-11-2018 IPR036388 Winged helix-like DNA-binding domain superfamily CDA09_01755 14f0a2af3656b02f925e4aa8a95eccea 287 SUPERFAMILY SSF53850 87 284 6.04E-42 T 01-11-2018 CDA09_01755 14f0a2af3656b02f925e4aa8a95eccea 287 SUPERFAMILY SSF46785 1 109 4.95E-22 T 01-11-2018 IPR036390 Winged helix DNA-binding domain superfamily CDA09_01755 14f0a2af3656b02f925e4aa8a95eccea 287 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 3 62 1.6E-17 T 01-11-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 CDA09_01755 14f0a2af3656b02f925e4aa8a95eccea 287 Gene3D G3DSA:3.40.190.290 91 285 4.2E-39 T 01-11-2018 CDA09_01755 14f0a2af3656b02f925e4aa8a95eccea 287 Pfam PF03466 LysR substrate binding domain 85 284 1.8E-49 T 01-11-2018 IPR005119 LysR, substrate-binding CDA09_01755 14f0a2af3656b02f925e4aa8a95eccea 287 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 39 50 2.2E-7 T 01-11-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 CDA09_01755 14f0a2af3656b02f925e4aa8a95eccea 287 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 29 39 2.2E-7 T 01-11-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 CDA09_01755 14f0a2af3656b02f925e4aa8a95eccea 287 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 18 29 2.2E-7 T 01-11-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 CDA09_20040 5b72c0d56818a9a19f5784edbff37f29 558 TIGRFAM TIGR00813 sss: transporter, solute:sodium symporter (SSS) family 68 474 1.5E-60 T 01-11-2018 IPR001734 Sodium/solute symporter GO:0016020|GO:0022857|GO:0055085 CDA09_20040 5b72c0d56818a9a19f5784edbff37f29 558 ProSitePatterns PS00456 Sodium:solute symporter family signature 1. 183 208 - T 01-11-2018 IPR018212 Sodium/solute symporter, conserved site CDA09_20040 5b72c0d56818a9a19f5784edbff37f29 558 Pfam PF00474 Sodium:solute symporter family 68 477 1.8E-106 T 01-11-2018 IPR001734 Sodium/solute symporter GO:0016020|GO:0022857|GO:0055085 CDA09_20040 5b72c0d56818a9a19f5784edbff37f29 558 Gene3D G3DSA:1.20.1730.10 55 553 1.2E-61 T 01-11-2018 IPR038377 Sodium/glucose symporter superfamily CDA09_11220 57ebeea12dbe0af1b890082a25c2b179 459 TIGRFAM TIGR00720 sda_mono: L-serine ammonia-lyase 3 456 5.9E-221 T 01-11-2018 IPR004644 Iron-sulphur-dependent L-serine dehydratase single chain form GO:0003941|GO:0006094 KEGG: 00260+4.3.1.17|KEGG: 00270+4.3.1.17 CDA09_11220 57ebeea12dbe0af1b890082a25c2b179 459 SUPERFAMILY SSF143548 17 158 2.88E-47 T 01-11-2018 IPR029009 Allosteric substrate binding domain superfamily Reactome: R-HSA-977347 CDA09_11220 57ebeea12dbe0af1b890082a25c2b179 459 Pfam PF03313 Serine dehydratase alpha chain 189 453 3.2E-106 T 01-11-2018 IPR005130 Serine dehydratase-like, alpha subunit CDA09_11220 57ebeea12dbe0af1b890082a25c2b179 459 Pfam PF03315 Serine dehydratase beta chain 4 157 1.9E-58 T 01-11-2018 IPR005131 Serine dehydratase beta chain GO:0003941|GO:0006094|GO:0051539 KEGG: 00260+4.3.1.17|KEGG: 00270+4.3.1.17 CDA09_11220 57ebeea12dbe0af1b890082a25c2b179 459 Gene3D G3DSA:3.30.1330.90 11 160 5.5E-56 T 01-11-2018 IPR029009 Allosteric substrate binding domain superfamily Reactome: R-HSA-977347 CDA09_07240 8108bfc9745f88db8fc190529714e0c4 649 Gene3D G3DSA:2.130.10.10 67 537 2.6E-186 T 01-11-2018 IPR015943 WD40/YVTN repeat-like-containing domain superfamily GO:0005515 CDA09_07240 8108bfc9745f88db8fc190529714e0c4 649 TIGRFAM TIGR04244 nitrous_NosZ_RR: nitrous-oxide reductase, TAT-dependent 17 648 0.0 T 01-11-2018 IPR023644 Nitrous-oxide reductase GO:0005507|GO:0005509|GO:0050304|GO:0055114 KEGG: 00910+1.7.2.4|MetaCyc: PWY-6748|MetaCyc: PWY-7084 CDA09_07240 8108bfc9745f88db8fc190529714e0c4 649 Pfam PF13473 Cupredoxin-like domain 555 631 8.1E-9 T 01-11-2018 IPR028096 EfeO-type cupredoxin-like domain CDA09_07240 8108bfc9745f88db8fc190529714e0c4 649 Gene3D G3DSA:2.60.40.420 538 649 4.3E-33 T 01-11-2018 IPR008972 Cupredoxin CDA09_07240 8108bfc9745f88db8fc190529714e0c4 649 SUPERFAMILY SSF49503 519 648 5.82E-32 T 01-11-2018 IPR008972 Cupredoxin CDA09_07240 8108bfc9745f88db8fc190529714e0c4 649 SUPERFAMILY SSF50974 68 527 4.58E-124 T 01-11-2018 IPR011045 Nitrous oxide reductase, N-terminal Reactome: R-HSA-114608 CDA09_15810 e027ab0a8aa8ac9505e22abd3a000385 426 SUPERFAMILY SSF53383 21 418 1.04E-96 T 01-11-2018 IPR015424 Pyridoxal phosphate-dependent transferase CDA09_15810 e027ab0a8aa8ac9505e22abd3a000385 426 Gene3D G3DSA:3.40.640.10 71 312 9.2E-138 T 01-11-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 CDA09_15810 e027ab0a8aa8ac9505e22abd3a000385 426 Gene3D G3DSA:3.90.1150.10 39 416 9.2E-138 T 01-11-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 CDA09_15810 e027ab0a8aa8ac9505e22abd3a000385 426 Pfam PF00155 Aminotransferase class I and II 53 407 4.4E-46 T 01-11-2018 IPR004839 Aminotransferase, class I/classII GO:0009058|GO:0030170 CDA09_09835 a7b35d8b7c9f55f92cf269bb1ae0079d 227 Gene3D G3DSA:3.90.550.10 2 172 2.1E-33 T 01-11-2018 IPR029044 Nucleotide-diphospho-sugar transferases CDA09_09835 a7b35d8b7c9f55f92cf269bb1ae0079d 227 Pfam PF01983 Guanylyl transferase CofC like 5 187 6.8E-19 T 01-11-2018 IPR002835 2-phospho-L-lactate guanylyltransferase, CofC GO:0016779 KEGG: 00680+2.7.7.68|MetaCyc: PWY-5198 CDA09_09835 a7b35d8b7c9f55f92cf269bb1ae0079d 227 SUPERFAMILY SSF53448 7 188 2.04E-28 T 01-11-2018 IPR029044 Nucleotide-diphospho-sugar transferases CDA09_09835 a7b35d8b7c9f55f92cf269bb1ae0079d 227 TIGRFAM TIGR03552 F420_cofC: 2-phospho-L-lactate guanylyltransferase 5 188 6.0E-39 T 01-11-2018 IPR002835 2-phospho-L-lactate guanylyltransferase, CofC GO:0016779 KEGG: 00680+2.7.7.68|MetaCyc: PWY-5198 CDA09_12370 7d57c333c19685d73400a3a338f2d9e3 213 Pfam PF01227 GTP cyclohydrolase I 31 207 1.8E-46 T 01-11-2018 IPR020602 GTP cyclohydrolase I domain KEGG: 00790+3.5.4.16|MetaCyc: PWY-5663|MetaCyc: PWY-5664|MetaCyc: PWY-6147|MetaCyc: PWY-6703|MetaCyc: PWY-6983|MetaCyc: PWY-7442|MetaCyc: PWY-7852|Reactome: R-HSA-1474151 CDA09_12370 7d57c333c19685d73400a3a338f2d9e3 213 Gene3D G3DSA:3.30.1130.10 78 211 3.4E-35 T 01-11-2018 CDA09_12370 7d57c333c19685d73400a3a338f2d9e3 213 ProSitePatterns PS00859 GTP cyclohydrolase I signature 1. 87 103 - T 01-11-2018 IPR018234 GTP cyclohydrolase I, conserved site GO:0003934|GO:0005737|GO:0046654 KEGG: 00790+3.5.4.16|MetaCyc: PWY-5663|MetaCyc: PWY-5664|MetaCyc: PWY-6147|MetaCyc: PWY-6703|MetaCyc: PWY-6983|MetaCyc: PWY-7442|MetaCyc: PWY-7852|Reactome: R-HSA-1474151 CDA09_12370 7d57c333c19685d73400a3a338f2d9e3 213 SUPERFAMILY SSF55620 20 208 1.04E-54 T 01-11-2018 CDA09_12370 7d57c333c19685d73400a3a338f2d9e3 213 Hamap MF_00223 GTP cyclohydrolase 1 [folE]. 26 208 28.552 T 01-11-2018 IPR001474 GTP cyclohydrolase I GO:0003934|GO:0005737|GO:0046654 KEGG: 00790+3.5.4.16|MetaCyc: PWY-5663|MetaCyc: PWY-5664|MetaCyc: PWY-6147|MetaCyc: PWY-6703|MetaCyc: PWY-6983|MetaCyc: PWY-7442|MetaCyc: PWY-7852|Reactome: R-HSA-1474151 CDA09_07250 c74d67f6a0e223768b277cb7d0c5f89d 229 Gene3D G3DSA:3.40.50.12740 5 224 7.1E-69 T 01-11-2018 CDA09_07250 c74d67f6a0e223768b277cb7d0c5f89d 229 SMART SM00448 5 118 1.7E-29 T 01-11-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 CDA09_07250 c74d67f6a0e223768b277cb7d0c5f89d 229 Pfam PF00072 Response regulator receiver domain 7 118 3.2E-25 T 01-11-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 CDA09_07250 c74d67f6a0e223768b277cb7d0c5f89d 229 SMART SM00421 161 218 5.8E-27 T 01-11-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 CDA09_07250 c74d67f6a0e223768b277cb7d0c5f89d 229 ProSitePatterns PS00622 LuxR-type HTH domain signature. 178 205 - T 01-11-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 CDA09_07250 c74d67f6a0e223768b277cb7d0c5f89d 229 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 164 178 3.7E-15 T 01-11-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 CDA09_07250 c74d67f6a0e223768b277cb7d0c5f89d 229 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 178 194 3.7E-15 T 01-11-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 CDA09_07250 c74d67f6a0e223768b277cb7d0c5f89d 229 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 194 206 3.7E-15 T 01-11-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 CDA09_07250 c74d67f6a0e223768b277cb7d0c5f89d 229 SUPERFAMILY SSF46894 151 224 3.74E-24 T 01-11-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 CDA09_07250 c74d67f6a0e223768b277cb7d0c5f89d 229 SUPERFAMILY SSF52172 4 135 8.82E-34 T 01-11-2018 IPR011006 CheY-like superfamily CDA09_07250 c74d67f6a0e223768b277cb7d0c5f89d 229 Pfam PF00196 Bacterial regulatory proteins, luxR family 163 218 2.3E-21 T 01-11-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 CDA09_06630 6ab558de7d016634672efdc5e3ea46a3 196 Pfam PF02417 Chromate transporter 15 181 4.1E-29 T 01-11-2018 IPR003370 Chromate transporter GO:0015109|GO:0015703 CDA09_08230 6c36b1194d49c4c7cb8e7521e7f60908 349 Pfam PF01734 Patatin-like phospholipase 19 208 3.7E-21 T 01-11-2018 IPR002641 Patatin-like phospholipase domain GO:0006629 CDA09_08230 6c36b1194d49c4c7cb8e7521e7f60908 349 SUPERFAMILY SSF52151 16 331 3.14E-44 T 01-11-2018 IPR016035 Acyl transferase/acyl hydrolase/lysophospholipase CDA09_08230 6c36b1194d49c4c7cb8e7521e7f60908 349 Gene3D G3DSA:3.40.1090.10 3 97 8.0E-16 T 01-11-2018 CDA09_08230 6c36b1194d49c4c7cb8e7521e7f60908 349 Gene3D G3DSA:3.40.1090.10 122 254 7.3E-9 T 01-11-2018 CDA09_22640 23b5976d416190121ab1161f27c2b5f8 319 Gene3D G3DSA:3.40.190.10 164 269 2.0E-41 T 01-11-2018 CDA09_22640 23b5976d416190121ab1161f27c2b5f8 319 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 10 67 7.7E-19 T 01-11-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 CDA09_22640 23b5976d416190121ab1161f27c2b5f8 319 Gene3D G3DSA:1.10.10.10 8 93 5.7E-24 T 01-11-2018 IPR036388 Winged helix-like DNA-binding domain superfamily CDA09_22640 23b5976d416190121ab1161f27c2b5f8 319 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 34 44 2.8E-10 T 01-11-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 CDA09_22640 23b5976d416190121ab1161f27c2b5f8 319 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 23 34 2.8E-10 T 01-11-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 CDA09_22640 23b5976d416190121ab1161f27c2b5f8 319 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 44 55 2.8E-10 T 01-11-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 CDA09_22640 23b5976d416190121ab1161f27c2b5f8 319 Gene3D G3DSA:3.40.190.10 101 294 2.0E-41 T 01-11-2018 CDA09_22640 23b5976d416190121ab1161f27c2b5f8 319 SUPERFAMILY SSF46785 9 83 1.15E-20 T 01-11-2018 IPR036390 Winged helix DNA-binding domain superfamily CDA09_22640 23b5976d416190121ab1161f27c2b5f8 319 SUPERFAMILY SSF53850 89 301 1.16E-25 T 01-11-2018 CDA09_22640 23b5976d416190121ab1161f27c2b5f8 319 Pfam PF03466 LysR substrate binding domain 89 299 6.5E-26 T 01-11-2018 IPR005119 LysR, substrate-binding CDA09_13185 d27a2e724c0dfa30b61f9f6e5201e584 394 SUPERFAMILY SSF51230 1 96 2.49E-28 T 01-11-2018 IPR011053 Single hybrid motif CDA09_13185 d27a2e724c0dfa30b61f9f6e5201e584 394 Pfam PF00364 Biotin-requiring enzyme 4 76 7.2E-21 T 01-11-2018 IPR000089 Biotin/lipoyl attachment CDA09_13185 d27a2e724c0dfa30b61f9f6e5201e584 394 ProSitePatterns PS00189 2-oxo acid dehydrogenases acyltransferase component lipoyl binding site. 27 56 - T 01-11-2018 IPR003016 2-oxo acid dehydrogenase, lipoyl-binding site Reactome: R-HSA-389661 CDA09_13185 d27a2e724c0dfa30b61f9f6e5201e584 394 Pfam PF02817 e3 binding domain 108 139 4.3E-11 T 01-11-2018 IPR004167 Peripheral subunit-binding domain GO:0016746 Reactome: R-HSA-389661 CDA09_13185 d27a2e724c0dfa30b61f9f6e5201e584 394 SUPERFAMILY SSF47005 106 143 1.83E-8 T 01-11-2018 IPR036625 E3-binding domain superfamily GO:0016746 Reactome: R-HSA-389661 CDA09_13185 d27a2e724c0dfa30b61f9f6e5201e584 394 SUPERFAMILY SSF52777 164 393 1.02E-86 T 01-11-2018 CDA09_13185 d27a2e724c0dfa30b61f9f6e5201e584 394 Gene3D G3DSA:2.40.50.100 2 102 2.2E-26 T 01-11-2018 CDA09_13185 d27a2e724c0dfa30b61f9f6e5201e584 394 Gene3D G3DSA:4.10.320.10 107 147 1.2E-10 T 01-11-2018 IPR036625 E3-binding domain superfamily GO:0016746 Reactome: R-HSA-389661 CDA09_13185 d27a2e724c0dfa30b61f9f6e5201e584 394 Gene3D G3DSA:3.30.559.10 162 394 2.8E-93 T 01-11-2018 IPR023213 Chloramphenicol acetyltransferase-like domain superfamily Reactome: R-HSA-389661 CDA09_13185 d27a2e724c0dfa30b61f9f6e5201e584 394 TIGRFAM TIGR01347 sucB: dihydrolipoyllysine-residue succinyltransferase, E2 component of oxoglutarate dehydrogenase (succinyl-transferring) complex 3 394 7.0E-168 T 01-11-2018 IPR006255 Dihydrolipoamide succinyltransferase GO:0004149|GO:0006099|GO:0045252 KEGG: 00020+2.3.1.61|KEGG: 00310+2.3.1.61|MetaCyc: PWY-5084|Reactome: R-HSA-389661|Reactome: R-HSA-71064|Reactome: R-HSA-71403 CDA09_13185 d27a2e724c0dfa30b61f9f6e5201e584 394 Pfam PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) 163 391 2.3E-79 T 01-11-2018 IPR001078 2-oxoacid dehydrogenase acyltransferase, catalytic domain GO:0016746 Reactome: R-HSA-389661 CDA09_04965 02429e362e634e2c18c5f3624deb6eb2 915 Pfam PF00311 Phosphoenolpyruvate carboxylase 136 915 4.5E-288 T 01-11-2018 IPR021135 Phosphoenolpyruvate carboxylase GO:0006099|GO:0008964|GO:0015977 KEGG: 00620+4.1.1.31|KEGG: 00680+4.1.1.31|KEGG: 00710+4.1.1.31|KEGG: 00720+4.1.1.31|MetaCyc: PWY-1622|MetaCyc: PWY-241|MetaCyc: PWY-5913|MetaCyc: PWY-6142|MetaCyc: PWY-6146|MetaCyc: PWY-6549|MetaCyc: PWY-7115|MetaCyc: PWY-7117|MetaCyc: PWY-7124 CDA09_04965 02429e362e634e2c18c5f3624deb6eb2 915 Hamap MF_00595 Phosphoenolpyruvate carboxylase [ppc]. 2 915 19.664 T 01-11-2018 IPR022805 Phosphoenolpyruvate carboxylase, bacterial/plant-type GO:0006099|GO:0008964|GO:0015977 KEGG: 00620+4.1.1.31|KEGG: 00680+4.1.1.31|KEGG: 00710+4.1.1.31|KEGG: 00720+4.1.1.31|MetaCyc: PWY-1622|MetaCyc: PWY-241|MetaCyc: PWY-5913|MetaCyc: PWY-6142|MetaCyc: PWY-6146|MetaCyc: PWY-6549|MetaCyc: PWY-7115|MetaCyc: PWY-7117|MetaCyc: PWY-7124 CDA09_04965 02429e362e634e2c18c5f3624deb6eb2 915 ProSitePatterns PS00393 Phosphoenolpyruvate carboxylase active site 2. 568 580 - T 01-11-2018 IPR033129 Phosphoenolpyruvate carboxylase, His active site KEGG: 00620+4.1.1.31|KEGG: 00680+4.1.1.31|KEGG: 00710+4.1.1.31|KEGG: 00720+4.1.1.31|MetaCyc: PWY-1622|MetaCyc: PWY-241|MetaCyc: PWY-5913|MetaCyc: PWY-6142|MetaCyc: PWY-6146|MetaCyc: PWY-6549|MetaCyc: PWY-7115|MetaCyc: PWY-7117|MetaCyc: PWY-7124 CDA09_04965 02429e362e634e2c18c5f3624deb6eb2 915 PRINTS PR00150 Phosphoenolpyruvate carboxylase signature 566 586 7.2E-56 T 01-11-2018 IPR021135 Phosphoenolpyruvate carboxylase GO:0006099|GO:0008964|GO:0015977 KEGG: 00620+4.1.1.31|KEGG: 00680+4.1.1.31|KEGG: 00710+4.1.1.31|KEGG: 00720+4.1.1.31|MetaCyc: PWY-1622|MetaCyc: PWY-241|MetaCyc: PWY-5913|MetaCyc: PWY-6142|MetaCyc: PWY-6146|MetaCyc: PWY-6549|MetaCyc: PWY-7115|MetaCyc: PWY-7117|MetaCyc: PWY-7124 CDA09_04965 02429e362e634e2c18c5f3624deb6eb2 915 PRINTS PR00150 Phosphoenolpyruvate carboxylase signature 608 637 7.2E-56 T 01-11-2018 IPR021135 Phosphoenolpyruvate carboxylase GO:0006099|GO:0008964|GO:0015977 KEGG: 00620+4.1.1.31|KEGG: 00680+4.1.1.31|KEGG: 00710+4.1.1.31|KEGG: 00720+4.1.1.31|MetaCyc: PWY-1622|MetaCyc: PWY-241|MetaCyc: PWY-5913|MetaCyc: PWY-6142|MetaCyc: PWY-6146|MetaCyc: PWY-6549|MetaCyc: PWY-7115|MetaCyc: PWY-7117|MetaCyc: PWY-7124 CDA09_04965 02429e362e634e2c18c5f3624deb6eb2 915 PRINTS PR00150 Phosphoenolpyruvate carboxylase signature 403 423 7.2E-56 T 01-11-2018 IPR021135 Phosphoenolpyruvate carboxylase GO:0006099|GO:0008964|GO:0015977 KEGG: 00620+4.1.1.31|KEGG: 00680+4.1.1.31|KEGG: 00710+4.1.1.31|KEGG: 00720+4.1.1.31|MetaCyc: PWY-1622|MetaCyc: PWY-241|MetaCyc: PWY-5913|MetaCyc: PWY-6142|MetaCyc: PWY-6146|MetaCyc: PWY-6549|MetaCyc: PWY-7115|MetaCyc: PWY-7117|MetaCyc: PWY-7124 CDA09_04965 02429e362e634e2c18c5f3624deb6eb2 915 PRINTS PR00150 Phosphoenolpyruvate carboxylase signature 192 208 7.2E-56 T 01-11-2018 IPR021135 Phosphoenolpyruvate carboxylase GO:0006099|GO:0008964|GO:0015977 KEGG: 00620+4.1.1.31|KEGG: 00680+4.1.1.31|KEGG: 00710+4.1.1.31|KEGG: 00720+4.1.1.31|MetaCyc: PWY-1622|MetaCyc: PWY-241|MetaCyc: PWY-5913|MetaCyc: PWY-6142|MetaCyc: PWY-6146|MetaCyc: PWY-6549|MetaCyc: PWY-7115|MetaCyc: PWY-7117|MetaCyc: PWY-7124 CDA09_04965 02429e362e634e2c18c5f3624deb6eb2 915 PRINTS PR00150 Phosphoenolpyruvate carboxylase signature 139 152 7.2E-56 T 01-11-2018 IPR021135 Phosphoenolpyruvate carboxylase GO:0006099|GO:0008964|GO:0015977 KEGG: 00620+4.1.1.31|KEGG: 00680+4.1.1.31|KEGG: 00710+4.1.1.31|KEGG: 00720+4.1.1.31|MetaCyc: PWY-1622|MetaCyc: PWY-241|MetaCyc: PWY-5913|MetaCyc: PWY-6142|MetaCyc: PWY-6146|MetaCyc: PWY-6549|MetaCyc: PWY-7115|MetaCyc: PWY-7117|MetaCyc: PWY-7124 CDA09_04965 02429e362e634e2c18c5f3624deb6eb2 915 PRINTS PR00150 Phosphoenolpyruvate carboxylase signature 252 267 7.2E-56 T 01-11-2018 IPR021135 Phosphoenolpyruvate carboxylase GO:0006099|GO:0008964|GO:0015977 KEGG: 00620+4.1.1.31|KEGG: 00680+4.1.1.31|KEGG: 00710+4.1.1.31|KEGG: 00720+4.1.1.31|MetaCyc: PWY-1622|MetaCyc: PWY-241|MetaCyc: PWY-5913|MetaCyc: PWY-6142|MetaCyc: PWY-6146|MetaCyc: PWY-6549|MetaCyc: PWY-7115|MetaCyc: PWY-7117|MetaCyc: PWY-7124 CDA09_04965 02429e362e634e2c18c5f3624deb6eb2 915 PRINTS PR00150 Phosphoenolpyruvate carboxylase signature 742 768 7.2E-56 T 01-11-2018 IPR021135 Phosphoenolpyruvate carboxylase GO:0006099|GO:0008964|GO:0015977 KEGG: 00620+4.1.1.31|KEGG: 00680+4.1.1.31|KEGG: 00710+4.1.1.31|KEGG: 00720+4.1.1.31|MetaCyc: PWY-1622|MetaCyc: PWY-241|MetaCyc: PWY-5913|MetaCyc: PWY-6142|MetaCyc: PWY-6146|MetaCyc: PWY-6549|MetaCyc: PWY-7115|MetaCyc: PWY-7117|MetaCyc: PWY-7124 CDA09_04965 02429e362e634e2c18c5f3624deb6eb2 915 ProSitePatterns PS00781 Phosphoenolpyruvate carboxylase active site 1. 140 151 - T 01-11-2018 IPR018129 Phosphoenolpyruvate carboxylase, Lys active site KEGG: 00620+4.1.1.31|KEGG: 00680+4.1.1.31|KEGG: 00710+4.1.1.31|KEGG: 00720+4.1.1.31|MetaCyc: PWY-1622|MetaCyc: PWY-241|MetaCyc: PWY-5913|MetaCyc: PWY-6142|MetaCyc: PWY-6146|MetaCyc: PWY-6549|MetaCyc: PWY-7115|MetaCyc: PWY-7117|MetaCyc: PWY-7124 CDA09_04965 02429e362e634e2c18c5f3624deb6eb2 915 SUPERFAMILY SSF51621 10 915 0.0 T 01-11-2018 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain superfamily GO:0003824 CDA09_04965 02429e362e634e2c18c5f3624deb6eb2 915 Gene3D G3DSA:1.20.1440.90 281 406 3.3E-11 T 01-11-2018 CDA09_20655 64448f4aa2f8ad803ac44f5461dac419 393 Gene3D G3DSA:3.30.750.24 306 390 6.1E-10 T 01-11-2018 IPR036513 STAS domain superfamily CDA09_20655 64448f4aa2f8ad803ac44f5461dac419 393 SUPERFAMILY SSF52091 306 386 2.55E-12 T 01-11-2018 IPR036513 STAS domain superfamily CDA09_20655 64448f4aa2f8ad803ac44f5461dac419 393 Pfam PF13466 STAS domain 307 384 2.5E-12 T 01-11-2018 IPR002645 STAS domain CDA09_16320 4861a352f5281c0ae51a5b95387fa8e7 554 Gene3D G3DSA:3.40.50.300 1 261 2.0E-39 T 01-11-2018 CDA09_16320 4861a352f5281c0ae51a5b95387fa8e7 554 Gene3D G3DSA:3.40.50.300 262 549 1.9E-48 T 01-11-2018 CDA09_16320 4861a352f5281c0ae51a5b95387fa8e7 554 TIGRFAM TIGR00634 recN: DNA repair protein RecN 1 548 9.7E-141 T 01-11-2018 IPR004604 DNA recombination/repair protein RecN GO:0005524|GO:0006281|GO:0006310 CDA09_16320 4861a352f5281c0ae51a5b95387fa8e7 554 SUPERFAMILY SSF52540 1 218 6.13E-59 T 01-11-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CDA09_16320 4861a352f5281c0ae51a5b95387fa8e7 554 Pfam PF02463 RecF/RecN/SMC N terminal domain 1 505 1.3E-13 T 01-11-2018 IPR003395 RecF/RecN/SMC, N-terminal CDA09_16320 4861a352f5281c0ae51a5b95387fa8e7 554 PIRSF PIRSF003128 1 553 2.7E-140 T 01-11-2018 IPR004604 DNA recombination/repair protein RecN GO:0005524|GO:0006281|GO:0006310 CDA09_16320 4861a352f5281c0ae51a5b95387fa8e7 554 SUPERFAMILY SSF52540 3 502 7.9E-28 T 01-11-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CDA09_22795 1840ed18449dfa7aa2cee23456f73d98 127 Gene3D G3DSA:3.40.50.510 1 127 2.0E-33 T 01-11-2018 IPR036662 Phosphotransferase system, mannose-type IIA component superfamily GO:0009401|GO:0016021 CDA09_22795 1840ed18449dfa7aa2cee23456f73d98 127 Pfam PF03610 PTS system fructose IIA component 3 106 6.1E-18 T 01-11-2018 IPR004701 Phosphotransferase system, mannose-type IIA component GO:0009401|GO:0016021 CDA09_22795 1840ed18449dfa7aa2cee23456f73d98 127 SUPERFAMILY SSF53062 1 126 3.4E-31 T 01-11-2018 IPR036662 Phosphotransferase system, mannose-type IIA component superfamily GO:0009401|GO:0016021 CDA09_07675 7818459e4c4bc16d0ba12b287bef1490 217 SUPERFAMILY SSF52172 3 135 8.4E-38 T 01-11-2018 IPR011006 CheY-like superfamily CDA09_07675 7818459e4c4bc16d0ba12b287bef1490 217 SMART SM00448 4 117 6.1E-36 T 01-11-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 CDA09_07675 7818459e4c4bc16d0ba12b287bef1490 217 Pfam PF00072 Response regulator receiver domain 6 116 1.4E-30 T 01-11-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 CDA09_07675 7818459e4c4bc16d0ba12b287bef1490 217 SUPERFAMILY SSF46894 141 212 4.08E-21 T 01-11-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 CDA09_07675 7818459e4c4bc16d0ba12b287bef1490 217 SMART SM00421 150 207 1.7E-23 T 01-11-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 CDA09_07675 7818459e4c4bc16d0ba12b287bef1490 217 Pfam PF00196 Bacterial regulatory proteins, luxR family 152 207 1.5E-19 T 01-11-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 CDA09_07675 7818459e4c4bc16d0ba12b287bef1490 217 Gene3D G3DSA:3.40.50.12740 4 212 3.1E-68 T 01-11-2018 CDA09_07675 7818459e4c4bc16d0ba12b287bef1490 217 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 167 183 2.5E-13 T 01-11-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 CDA09_07675 7818459e4c4bc16d0ba12b287bef1490 217 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 183 195 2.5E-13 T 01-11-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 CDA09_07675 7818459e4c4bc16d0ba12b287bef1490 217 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 153 167 2.5E-13 T 01-11-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 CDA09_15460 10d0d6ca16de52c15378cae83351dbe8 135 Gene3D G3DSA:3.10.129.10 1 130 4.2E-35 T 01-11-2018 CDA09_15460 10d0d6ca16de52c15378cae83351dbe8 135 PIRSF PIRSF014972 1 133 2.5E-36 T 01-11-2018 IPR025540 Fluoroacetyl-CoA thioesterase CDA09_15460 10d0d6ca16de52c15378cae83351dbe8 135 SUPERFAMILY SSF54637 2 130 3.49E-34 T 01-11-2018 IPR029069 HotDog domain superfamily CDA09_02165 4c33e213915d2ee8bc0f2bb0ede4e860 213 SUPERFAMILY SSF52833 37 203 4.46E-35 T 01-11-2018 IPR036249 Thioredoxin-like superfamily CDA09_02165 4c33e213915d2ee8bc0f2bb0ede4e860 213 Gene3D G3DSA:3.40.30.10 24 212 5.0E-47 T 01-11-2018 CDA09_02165 4c33e213915d2ee8bc0f2bb0ede4e860 213 ProSitePatterns PS00194 Thioredoxin family active site. 49 67 - T 01-11-2018 IPR017937 Thioredoxin, conserved site GO:0045454 CDA09_02165 4c33e213915d2ee8bc0f2bb0ede4e860 213 Pfam PF01323 DSBA-like thioredoxin domain 49 184 1.0E-13 T 01-11-2018 IPR001853 DSBA-like thioredoxin domain GO:0015035 Reactome: R-HSA-156590|Reactome: R-HSA-9033241 CDA09_02165 4c33e213915d2ee8bc0f2bb0ede4e860 213 PIRSF PIRSF001488 5 210 1.6E-46 T 01-11-2018 IPR023205 Thiol:disulphide interchange protein DsbA/DsbL CDA09_14205 da88ae49898cb3d02d858494f58a31f0 259 Pfam PF11679 Protein of unknown function (DUF3275) 47 240 1.6E-43 T 01-11-2018 IPR021693 Protein of unknown function DUF3275 CDA09_07895 ee7dec007e82f107f00e482649376a29 141 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 14 134 1.9E-22 T 01-11-2018 IPR000014 PAS domain CDA09_07895 ee7dec007e82f107f00e482649376a29 141 Gene3D G3DSA:3.30.450.20 10 141 2.3E-25 T 01-11-2018 CDA09_07895 ee7dec007e82f107f00e482649376a29 141 SMART SM00086 86 128 2.9E-5 T 01-11-2018 IPR001610 PAC motif CDA09_07895 ee7dec007e82f107f00e482649376a29 141 Pfam PF00989 PAS fold 13 125 2.2E-14 T 01-11-2018 IPR013767 PAS fold GO:0006355 CDA09_07895 ee7dec007e82f107f00e482649376a29 141 SMART SM00091 10 76 8.3E-8 T 01-11-2018 IPR000014 PAS domain CDA09_07895 ee7dec007e82f107f00e482649376a29 141 SUPERFAMILY SSF55785 21 134 3.77E-26 T 01-11-2018 IPR035965 PAS domain superfamily CDA09_02500 4ae5ff258f002f3c7497dc31d88a1a3c 313 Gene3D G3DSA:3.30.200.20 1 102 5.9E-35 T 01-11-2018 CDA09_02500 4ae5ff258f002f3c7497dc31d88a1a3c 313 TIGRFAM TIGR00938 thrB_alt: homoserine kinase 1 302 2.7E-111 T 01-11-2018 IPR005280 Homoserine kinase, type II GO:0004413|GO:0009088 KEGG: 00260+2.7.1.39|MetaCyc: PWY-702 CDA09_02500 4ae5ff258f002f3c7497dc31d88a1a3c 313 Gene3D G3DSA:3.90.1200.10 105 309 7.3E-71 T 01-11-2018 CDA09_02500 4ae5ff258f002f3c7497dc31d88a1a3c 313 Pfam PF01636 Phosphotransferase enzyme family 27 252 2.3E-32 T 01-11-2018 IPR002575 Aminoglycoside phosphotransferase CDA09_02500 4ae5ff258f002f3c7497dc31d88a1a3c 313 SUPERFAMILY SSF56112 6 306 3.37E-73 T 01-11-2018 IPR011009 Protein kinase-like domain superfamily CDA09_02500 4ae5ff258f002f3c7497dc31d88a1a3c 313 Hamap MF_00301 Homoserine kinase [thrB]. 1 313 152.327 T 01-11-2018 IPR005280 Homoserine kinase, type II GO:0004413|GO:0009088 KEGG: 00260+2.7.1.39|MetaCyc: PWY-702 CDA09_17680 f6b75ca96e2f90b851f2e34548765dd1 411 PRINTS PR00812 Bacterial general secretion pathway protein F signature 392 411 5.3E-19 T 01-11-2018 IPR003004 GspF/PilC family CDA09_17680 f6b75ca96e2f90b851f2e34548765dd1 411 PRINTS PR00812 Bacterial general secretion pathway protein F signature 73 85 5.3E-19 T 01-11-2018 IPR003004 GspF/PilC family CDA09_17680 f6b75ca96e2f90b851f2e34548765dd1 411 PRINTS PR00812 Bacterial general secretion pathway protein F signature 376 390 5.3E-19 T 01-11-2018 IPR003004 GspF/PilC family CDA09_17680 f6b75ca96e2f90b851f2e34548765dd1 411 PRINTS PR00812 Bacterial general secretion pathway protein F signature 172 200 5.3E-19 T 01-11-2018 IPR003004 GspF/PilC family CDA09_17680 f6b75ca96e2f90b851f2e34548765dd1 411 Gene3D G3DSA:1.20.81.30 264 374 1.4E-30 T 01-11-2018 CDA09_17680 f6b75ca96e2f90b851f2e34548765dd1 411 Gene3D G3DSA:1.20.81.30 63 179 5.1E-31 T 01-11-2018 CDA09_17680 f6b75ca96e2f90b851f2e34548765dd1 411 Pfam PF00482 Type II secretion system (T2SS), protein F 77 200 7.8E-32 T 01-11-2018 IPR018076 Type II secretion system F domain CDA09_17680 f6b75ca96e2f90b851f2e34548765dd1 411 Pfam PF00482 Type II secretion system (T2SS), protein F 281 403 8.8E-31 T 01-11-2018 IPR018076 Type II secretion system F domain CDA09_19200 5abfa907cab2ef718891002f1927e3b2 135 Pfam PF01850 PIN domain 2 118 4.7E-14 T 01-11-2018 IPR002716 PIN domain CDA09_19200 5abfa907cab2ef718891002f1927e3b2 135 SUPERFAMILY SSF88723 1 133 1.51E-29 T 01-11-2018 IPR029060 PIN-like domain superfamily CDA09_19200 5abfa907cab2ef718891002f1927e3b2 135 Gene3D G3DSA:3.40.50.1010 1 135 1.5E-37 T 01-11-2018 CDA09_19200 5abfa907cab2ef718891002f1927e3b2 135 Hamap MF_00265 tRNA(fMet)-specific endonuclease VapC [vapC]. 2 132 11.669 T 01-11-2018 IPR022907 VapC family GO:0004540 CDA09_12210 f7baa491db075bfdce5004731bb67bcf 397 SUPERFAMILY SSF50952 43 397 2.48E-52 T 01-11-2018 IPR011041 Soluble quinoprotein glucose/sorbosone dehydrogenase GO:0003824 CDA09_12210 f7baa491db075bfdce5004731bb67bcf 397 Pfam PF07995 Glucose / Sorbosone dehydrogenase 64 393 1.5E-138 T 01-11-2018 IPR012938 Glucose/Sorbosone dehydrogenase CDA09_12210 f7baa491db075bfdce5004731bb67bcf 397 Gene3D G3DSA:2.120.10.30 50 397 2.7E-124 T 01-11-2018 IPR011042 Six-bladed beta-propeller, TolB-like CDA09_07210 e1dea12a57db8c3720a482d2d7c26fd9 180 SUPERFAMILY SSF160387 62 179 2.88E-37 T 01-11-2018 CDA09_07210 e1dea12a57db8c3720a482d2d7c26fd9 180 Pfam PF05573 NosL 22 167 5.9E-55 T 01-11-2018 IPR008719 Nitrous oxide reductase accessory protein NosL CDA09_07210 e1dea12a57db8c3720a482d2d7c26fd9 180 Gene3D G3DSA:3.30.70.2050 122 178 1.7E-11 T 01-11-2018 CDA09_07210 e1dea12a57db8c3720a482d2d7c26fd9 180 Gene3D G3DSA:3.30.70.2060 62 121 1.7E-17 T 01-11-2018 CDA09_10795 fb68c8b7af8bff4ba039ec0994b9da4e 411 Gene3D G3DSA:3.40.47.10 1 256 1.7E-79 T 01-11-2018 IPR016039 Thiolase-like GO:0003824 CDA09_10795 fb68c8b7af8bff4ba039ec0994b9da4e 411 SUPERFAMILY SSF53901 4 252 6.73E-67 T 01-11-2018 IPR016039 Thiolase-like GO:0003824 CDA09_10795 fb68c8b7af8bff4ba039ec0994b9da4e 411 Gene3D G3DSA:3.40.47.10 257 400 1.8E-49 T 01-11-2018 IPR016039 Thiolase-like GO:0003824 CDA09_10795 fb68c8b7af8bff4ba039ec0994b9da4e 411 Pfam PF00109 Beta-ketoacyl synthase, N-terminal domain 4 247 6.7E-53 T 01-11-2018 IPR014030 Beta-ketoacyl synthase, N-terminal CDA09_10795 fb68c8b7af8bff4ba039ec0994b9da4e 411 Pfam PF02801 Beta-ketoacyl synthase, C-terminal domain 257 367 8.1E-35 T 01-11-2018 IPR014031 Beta-ketoacyl synthase, C-terminal CDA09_10795 fb68c8b7af8bff4ba039ec0994b9da4e 411 SUPERFAMILY SSF53901 215 410 5.77E-65 T 01-11-2018 IPR016039 Thiolase-like GO:0003824 CDA09_10795 fb68c8b7af8bff4ba039ec0994b9da4e 411 SMART SM00825 Beta-ketoacyl synthase 6 411 2.2E-16 T 01-11-2018 IPR020841 Polyketide synthase, beta-ketoacyl synthase domain CDA09_06275 dc9a7daf003553307e162a6fc4f183cf 489 SMART SM00228 291 373 1.6E-12 T 01-11-2018 IPR001478 PDZ domain GO:0005515 CDA09_06275 dc9a7daf003553307e162a6fc4f183cf 489 SMART SM00228 403 479 1.1E-8 T 01-11-2018 IPR001478 PDZ domain GO:0005515 CDA09_06275 dc9a7daf003553307e162a6fc4f183cf 489 SUPERFAMILY SSF50494 53 282 2.11E-66 T 01-11-2018 IPR009003 Peptidase S1, PA clan CDA09_06275 dc9a7daf003553307e162a6fc4f183cf 489 PRINTS PR00834 HtrA/DegQ protease family signature 128 140 2.4E-51 T 01-11-2018 IPR001940 Peptidase S1C GO:0004252|GO:0006508 CDA09_06275 dc9a7daf003553307e162a6fc4f183cf 489 PRINTS PR00834 HtrA/DegQ protease family signature 189 213 2.4E-51 T 01-11-2018 IPR001940 Peptidase S1C GO:0004252|GO:0006508 CDA09_06275 dc9a7daf003553307e162a6fc4f183cf 489 PRINTS PR00834 HtrA/DegQ protease family signature 331 343 2.4E-51 T 01-11-2018 IPR001940 Peptidase S1C GO:0004252|GO:0006508 CDA09_06275 dc9a7daf003553307e162a6fc4f183cf 489 PRINTS PR00834 HtrA/DegQ protease family signature 245 262 2.4E-51 T 01-11-2018 IPR001940 Peptidase S1C GO:0004252|GO:0006508 CDA09_06275 dc9a7daf003553307e162a6fc4f183cf 489 PRINTS PR00834 HtrA/DegQ protease family signature 223 240 2.4E-51 T 01-11-2018 IPR001940 Peptidase S1C GO:0004252|GO:0006508 CDA09_06275 dc9a7daf003553307e162a6fc4f183cf 489 PRINTS PR00834 HtrA/DegQ protease family signature 149 169 2.4E-51 T 01-11-2018 IPR001940 Peptidase S1C GO:0004252|GO:0006508 CDA09_06275 dc9a7daf003553307e162a6fc4f183cf 489 Gene3D G3DSA:2.30.42.10 286 392 1.3E-27 T 01-11-2018 CDA09_06275 dc9a7daf003553307e162a6fc4f183cf 489 Pfam PF13365 Trypsin-like peptidase domain 119 252 1.2E-35 T 01-11-2018 CDA09_06275 dc9a7daf003553307e162a6fc4f183cf 489 SUPERFAMILY SSF50156 249 374 8.94E-23 T 01-11-2018 IPR036034 PDZ superfamily GO:0005515 CDA09_06275 dc9a7daf003553307e162a6fc4f183cf 489 TIGRFAM TIGR02037 degP_htrA_DO: peptidase Do 55 484 2.6E-154 T 01-11-2018 IPR011782 Peptidase S1C, Do GO:0004252|GO:0006508 CDA09_06275 dc9a7daf003553307e162a6fc4f183cf 489 Gene3D G3DSA:2.30.42.10 402 486 1.1E-16 T 01-11-2018 CDA09_06275 dc9a7daf003553307e162a6fc4f183cf 489 Gene3D G3DSA:2.40.10.120 53 284 8.0E-84 T 01-11-2018 CDA09_06275 dc9a7daf003553307e162a6fc4f183cf 489 Pfam PF13180 PDZ domain 291 382 8.2E-18 T 01-11-2018 IPR001478 PDZ domain GO:0005515 CDA09_06275 dc9a7daf003553307e162a6fc4f183cf 489 Pfam PF13180 PDZ domain 403 487 1.9E-10 T 01-11-2018 IPR001478 PDZ domain GO:0005515 CDA09_06275 dc9a7daf003553307e162a6fc4f183cf 489 SUPERFAMILY SSF50156 403 487 2.1E-15 T 01-11-2018 IPR036034 PDZ superfamily GO:0005515 CDA09_14780 cb1003472a785932a086a06303d018a2 215 Pfam PF00694 Aconitase C-terminal domain 1 131 1.4E-34 T 01-11-2018 IPR000573 Aconitase A/isopropylmalate dehydratase small subunit, swivel domain KEGG: 00290+4.2.1.33 CDA09_14780 cb1003472a785932a086a06303d018a2 215 TIGRFAM TIGR00171 leuD: 3-isopropylmalate dehydratase, small subunit 1 196 1.2E-76 T 01-11-2018 IPR004431 3-isopropylmalate dehydratase, small subunit GO:0003861|GO:0009098|GO:0009316 KEGG: 00290+4.2.1.33 CDA09_14780 cb1003472a785932a086a06303d018a2 215 Gene3D G3DSA:3.20.19.10 1 184 2.3E-75 T 01-11-2018 IPR015928 Aconitase/3-isopropylmalate dehydratase, swivel KEGG: 00290+4.2.1.33 CDA09_14780 cb1003472a785932a086a06303d018a2 215 SUPERFAMILY SSF52016 1 201 9.22E-59 T 01-11-2018 CDA09_14780 cb1003472a785932a086a06303d018a2 215 Hamap MF_01031 3-isopropylmalate dehydratase small subunit [leuD]. 1 210 43.105 T 01-11-2018 IPR004431 3-isopropylmalate dehydratase, small subunit GO:0003861|GO:0009098|GO:0009316 KEGG: 00290+4.2.1.33 CDA09_06220 41187abe820ea691650c7c4308d78195 225 Pfam PF00308 Bacterial dnaA protein 90 198 2.5E-8 T 01-11-2018 IPR013317 Chromosomal replication initiator protein DnaA CDA09_06220 41187abe820ea691650c7c4308d78195 225 SUPERFAMILY SSF52540 11 201 3.0E-22 T 01-11-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CDA09_06220 41187abe820ea691650c7c4308d78195 225 TIGRFAM TIGR03420 DnaA_homol_Hda: DnaA regulatory inactivator Hda 3 220 2.1E-68 T 01-11-2018 IPR017788 DnaA regulatory inactivator Hda GO:0032297 CDA09_06220 41187abe820ea691650c7c4308d78195 225 Gene3D G3DSA:1.10.8.60 154 221 3.8E-22 T 01-11-2018 CDA09_06220 41187abe820ea691650c7c4308d78195 225 Gene3D G3DSA:3.40.50.300 33 152 3.3E-19 T 01-11-2018 CDA09_05915 08a6a625039e5c6cd299efc67c507bac 341 Pfam PF13379 NMT1-like family 24 254 1.2E-28 T 01-11-2018 CDA09_05915 08a6a625039e5c6cd299efc67c507bac 341 Gene3D G3DSA:3.40.190.10 25 138 1.2E-20 T 01-11-2018 CDA09_05915 08a6a625039e5c6cd299efc67c507bac 341 SUPERFAMILY SSF53850 26 249 4.26E-45 T 01-11-2018 CDA09_05915 08a6a625039e5c6cd299efc67c507bac 341 Gene3D G3DSA:3.40.190.10 139 312 1.3E-28 T 01-11-2018 CDA09_05915 08a6a625039e5c6cd299efc67c507bac 341 SMART SM00062 27 259 2.3E-7 T 01-11-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF CDA09_07575 3ae5f815d403ba13999138dc9b99a55b 454 Pfam PF02417 Chromate transporter 263 447 3.2E-31 T 01-11-2018 IPR003370 Chromate transporter GO:0015109|GO:0015703 CDA09_07575 3ae5f815d403ba13999138dc9b99a55b 454 Pfam PF02417 Chromate transporter 23 187 2.4E-36 T 01-11-2018 IPR003370 Chromate transporter GO:0015109|GO:0015703 CDA09_07575 3ae5f815d403ba13999138dc9b99a55b 454 TIGRFAM TIGR00937 2A51: chromate efflux transporter 30 447 2.1E-67 T 01-11-2018 IPR014047 Chromate transporter, long chain CDA09_07575 3ae5f815d403ba13999138dc9b99a55b 454 PIRSF PIRSF004810 5 454 4.6E-132 T 01-11-2018 IPR014047 Chromate transporter, long chain CDA09_09670 1b93ce2301e3c7f3cdd5d647d6ae0605 571 Gene3D G3DSA:3.30.300.30 460 562 1.1E-26 T 01-11-2018 CDA09_09670 1b93ce2301e3c7f3cdd5d647d6ae0605 571 Pfam PF13193 AMP-binding enzyme C-terminal domain 473 549 9.7E-17 T 01-11-2018 IPR025110 AMP-binding enzyme, C-terminal domain CDA09_09670 1b93ce2301e3c7f3cdd5d647d6ae0605 571 Pfam PF00501 AMP-binding enzyme 52 464 2.5E-81 T 01-11-2018 IPR000873 AMP-dependent synthetase/ligase GO:0003824 CDA09_09670 1b93ce2301e3c7f3cdd5d647d6ae0605 571 Gene3D G3DSA:3.40.50.12780 44 459 4.1E-97 T 01-11-2018 CDA09_09670 1b93ce2301e3c7f3cdd5d647d6ae0605 571 SUPERFAMILY SSF56801 48 561 8.37E-125 T 01-11-2018 CDA09_03790 440cf9127194f21cce88062f4dd8a8c9 96 PRINTS PR00112 Acylphosphatase signature 8 23 2.8E-7 T 01-11-2018 IPR020456 Acylphosphatase GO:0003998 KEGG: 00620+3.6.1.7|KEGG: 00627+3.6.1.7 CDA09_03790 440cf9127194f21cce88062f4dd8a8c9 96 PRINTS PR00112 Acylphosphatase signature 29 54 2.8E-7 T 01-11-2018 IPR020456 Acylphosphatase GO:0003998 KEGG: 00620+3.6.1.7|KEGG: 00627+3.6.1.7 CDA09_03790 440cf9127194f21cce88062f4dd8a8c9 96 SUPERFAMILY SSF54975 6 82 4.8E-25 T 01-11-2018 IPR036046 Acylphosphatase-like domain superfamily KEGG: 00620+3.6.1.7|KEGG: 00627+3.6.1.7 CDA09_03790 440cf9127194f21cce88062f4dd8a8c9 96 ProSitePatterns PS00151 Acylphosphatase signature 2. 37 53 - T 01-11-2018 IPR017968 Acylphosphatase, conserved site KEGG: 00620+3.6.1.7|KEGG: 00627+3.6.1.7 CDA09_03790 440cf9127194f21cce88062f4dd8a8c9 96 Pfam PF00708 Acylphosphatase 10 81 2.0E-22 T 01-11-2018 IPR001792 Acylphosphatase-like domain KEGG: 00620+3.6.1.7|KEGG: 00627+3.6.1.7 CDA09_03790 440cf9127194f21cce88062f4dd8a8c9 96 Gene3D G3DSA:3.30.70.100 1 91 1.0E-25 T 01-11-2018 CDA09_03790 440cf9127194f21cce88062f4dd8a8c9 96 ProSitePatterns PS00150 Acylphosphatase signature 1. 13 23 - T 01-11-2018 IPR017968 Acylphosphatase, conserved site KEGG: 00620+3.6.1.7|KEGG: 00627+3.6.1.7 CDA09_18715 d1647a6530287b88c0d339a3601098bf 711 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 494 677 5.1E-40 T 01-11-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 CDA09_18715 d1647a6530287b88c0d339a3601098bf 711 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 547 574 4.4E-21 T 01-11-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 CDA09_18715 d1647a6530287b88c0d339a3601098bf 711 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 470 499 4.4E-21 T 01-11-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 CDA09_18715 d1647a6530287b88c0d339a3601098bf 711 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 576 605 4.4E-21 T 01-11-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 CDA09_18715 d1647a6530287b88c0d339a3601098bf 711 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 624 653 4.4E-21 T 01-11-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 CDA09_18715 d1647a6530287b88c0d339a3601098bf 711 SUPERFAMILY SSF58104 409 711 6.54E-64 T 01-11-2018 CDA09_18715 d1647a6530287b88c0d339a3601098bf 711 SMART SM00283 449 710 5.5E-77 T 01-11-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 CDA09_18715 d1647a6530287b88c0d339a3601098bf 711 Gene3D G3DSA:1.10.287.950 383 711 3.4E-63 T 01-11-2018 CDA09_18715 d1647a6530287b88c0d339a3601098bf 711 Pfam PF13675 Type IV pili methyl-accepting chemotaxis transducer N-term 78 181 6.6E-15 T 01-11-2018 IPR029095 NarX-like, N-terminal CDA09_18715 d1647a6530287b88c0d339a3601098bf 711 ProDom PD968187 BETA-DEFENSIN ANTIBIOTIC PRECURSOR ANTIMICROBIAL DEFENSIN BETA SIGNAL DEFENSIN BD-32 DEFB-32 428 680 0.003 T 01-11-2018 CDA09_16470 8f29b94f10c42128e56780fd67d6e966 271 Pfam PF01435 Peptidase family M48 76 256 1.2E-33 T 01-11-2018 IPR001915 Peptidase M48 GO:0004222|GO:0006508 CDA09_16470 8f29b94f10c42128e56780fd67d6e966 271 Gene3D G3DSA:3.30.2010.10 90 158 2.3E-5 T 01-11-2018 CDA09_07710 60a396dbc1de5208580ad483e1dced94 198 Pfam PF00072 Response regulator receiver domain 4 123 4.9E-21 T 01-11-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 CDA09_07710 60a396dbc1de5208580ad483e1dced94 198 Gene3D G3DSA:3.40.50.2300 1 159 1.4E-30 T 01-11-2018 CDA09_07710 60a396dbc1de5208580ad483e1dced94 198 SUPERFAMILY SSF52172 2 147 7.4E-30 T 01-11-2018 IPR011006 CheY-like superfamily CDA09_07710 60a396dbc1de5208580ad483e1dced94 198 SMART SM00448 2 123 2.8E-21 T 01-11-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 CDA09_17330 76866d044b70a3887bc424e4f505ed63 483 Gene3D G3DSA:3.40.50.300 262 446 1.3E-49 T 01-11-2018 CDA09_17330 76866d044b70a3887bc424e4f505ed63 483 SMART SM00382 267 453 5.8E-7 T 01-11-2018 IPR003593 AAA+ ATPase domain CDA09_17330 76866d044b70a3887bc424e4f505ed63 483 Pfam PF00448 SRP54-type protein, GTPase domain 270 458 5.8E-31 T 01-11-2018 IPR000897 Signal recognition particle, SRP54 subunit, GTPase domain GO:0005525|GO:0006614 Reactome: R-HSA-1799339 CDA09_17330 76866d044b70a3887bc424e4f505ed63 483 TIGRFAM TIGR03499 FlhF: flagellar biosynthesis protein FlhF 1 356 5.8E-79 T 01-11-2018 IPR020006 Flagellar biosynthesis protein FlhF GO:0003924|GO:0044781 CDA09_17330 76866d044b70a3887bc424e4f505ed63 483 SMART SM00962 268 459 9.7E-46 T 01-11-2018 IPR000897 Signal recognition particle, SRP54 subunit, GTPase domain GO:0005525|GO:0006614 Reactome: R-HSA-1799339 CDA09_17330 76866d044b70a3887bc424e4f505ed63 483 Gene3D G3DSA:1.20.120.1380 234 261 1.3E-49 T 01-11-2018 CDA09_17330 76866d044b70a3887bc424e4f505ed63 483 SUPERFAMILY SSF52540 264 456 2.48E-30 T 01-11-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CDA09_16190 94ad23fff0e5b0d4f8d42ce129384f46 161 Pfam PF12838 4Fe-4S dicluster domain 61 115 3.2E-12 T 01-11-2018 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain CDA09_16190 94ad23fff0e5b0d4f8d42ce129384f46 161 TIGRFAM TIGR01971 NuoI: NADH-quinone oxidoreductase, chain I 18 139 1.7E-46 T 01-11-2018 IPR010226 NADH-quinone oxidoreductase, chain I GO:0016020|GO:0016651|GO:0051539|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 CDA09_16190 94ad23fff0e5b0d4f8d42ce129384f46 161 Hamap MF_01351 NAD(P)H-quinone oxidoreductase subunit I, chloroplastic [ndhI]. 9 158 28.649 T 01-11-2018 IPR010226 NADH-quinone oxidoreductase, chain I GO:0016020|GO:0016651|GO:0051539|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 CDA09_16190 94ad23fff0e5b0d4f8d42ce129384f46 161 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 101 112 - T 01-11-2018 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site CDA09_16190 94ad23fff0e5b0d4f8d42ce129384f46 161 Gene3D G3DSA:3.30.70.3270 35 161 2.4E-38 T 01-11-2018 CDA09_16190 94ad23fff0e5b0d4f8d42ce129384f46 161 SUPERFAMILY SSF54862 35 143 1.84E-25 T 01-11-2018 CDA09_04045 ecb7d62b22fc42b2b182a35d8f6cd74e 571 SUPERFAMILY SSF48452 142 428 1.8E-26 T 01-11-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 CDA09_04045 ecb7d62b22fc42b2b182a35d8f6cd74e 571 SUPERFAMILY SSF48452 391 558 1.42E-23 T 01-11-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 CDA09_04045 ecb7d62b22fc42b2b182a35d8f6cd74e 571 Gene3D G3DSA:1.25.40.10 36 391 2.9E-34 T 01-11-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 CDA09_04045 ecb7d62b22fc42b2b182a35d8f6cd74e 571 Gene3D G3DSA:1.25.40.10 392 567 9.9E-27 T 01-11-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 CDA09_04045 ecb7d62b22fc42b2b182a35d8f6cd74e 571 Pfam PF13432 Tetratricopeptide repeat 432 492 7.1E-5 T 01-11-2018 CDA09_04045 ecb7d62b22fc42b2b182a35d8f6cd74e 571 Pfam PF13432 Tetratricopeptide repeat 298 352 1.5E-4 T 01-11-2018 CDA09_04045 ecb7d62b22fc42b2b182a35d8f6cd74e 571 SMART SM00028 457 491 38.0 T 01-11-2018 IPR019734 Tetratricopeptide repeat GO:0005515 CDA09_04045 ecb7d62b22fc42b2b182a35d8f6cd74e 571 SMART SM00028 525 558 2.7 T 01-11-2018 IPR019734 Tetratricopeptide repeat GO:0005515 CDA09_04045 ecb7d62b22fc42b2b182a35d8f6cd74e 571 SMART SM00028 184 217 21.0 T 01-11-2018 IPR019734 Tetratricopeptide repeat GO:0005515 CDA09_04045 ecb7d62b22fc42b2b182a35d8f6cd74e 571 SMART SM00028 354 387 56.0 T 01-11-2018 IPR019734 Tetratricopeptide repeat GO:0005515 CDA09_04045 ecb7d62b22fc42b2b182a35d8f6cd74e 571 Pfam PF14559 Tetratricopeptide repeat 230 289 6.5E-8 T 01-11-2018 CDA09_04045 ecb7d62b22fc42b2b182a35d8f6cd74e 571 Pfam PF14559 Tetratricopeptide repeat 505 565 1.2E-6 T 01-11-2018 CDA09_08285 681c79073aa4dd33b474a7ec1a8b78c4 256 PRINTS PR00111 Alpha/beta hydrolase fold signature 30 45 8.7E-6 T 01-11-2018 IPR000073 Alpha/beta hydrolase fold-1 CDA09_08285 681c79073aa4dd33b474a7ec1a8b78c4 256 PRINTS PR00111 Alpha/beta hydrolase fold signature 75 88 8.7E-6 T 01-11-2018 IPR000073 Alpha/beta hydrolase fold-1 CDA09_08285 681c79073aa4dd33b474a7ec1a8b78c4 256 PRINTS PR00111 Alpha/beta hydrolase fold signature 89 102 8.7E-6 T 01-11-2018 IPR000073 Alpha/beta hydrolase fold-1 CDA09_08285 681c79073aa4dd33b474a7ec1a8b78c4 256 PRINTS PR00111 Alpha/beta hydrolase fold signature 194 208 8.7E-6 T 01-11-2018 IPR000073 Alpha/beta hydrolase fold-1 CDA09_08285 681c79073aa4dd33b474a7ec1a8b78c4 256 Pfam PF12697 Alpha/beta hydrolase family 8 241 2.7E-11 T 01-11-2018 IPR000073 Alpha/beta hydrolase fold-1 CDA09_08285 681c79073aa4dd33b474a7ec1a8b78c4 256 Gene3D G3DSA:3.40.50.1820 2 250 3.1E-31 T 01-11-2018 IPR029058 Alpha/Beta hydrolase fold CDA09_08285 681c79073aa4dd33b474a7ec1a8b78c4 256 SUPERFAMILY SSF53474 5 247 3.62E-32 T 01-11-2018 IPR029058 Alpha/Beta hydrolase fold CDA09_15740 ee0446768ecbd7d6b7ce6146fc58ef93 90 SMART SM00411 1 90 3.9E-38 T 01-11-2018 IPR000119 Histone-like DNA-binding protein GO:0003677 CDA09_15740 ee0446768ecbd7d6b7ce6146fc58ef93 90 Pfam PF00216 Bacterial DNA-binding protein 1 90 3.7E-32 T 01-11-2018 IPR000119 Histone-like DNA-binding protein GO:0003677 CDA09_15740 ee0446768ecbd7d6b7ce6146fc58ef93 90 SUPERFAMILY SSF47729 1 90 5.0E-31 T 01-11-2018 IPR010992 Integration host factor (IHF)-like DNA-binding domain superfamily GO:0003677 CDA09_15740 ee0446768ecbd7d6b7ce6146fc58ef93 90 ProSitePatterns PS00045 Bacterial histone-like DNA-binding proteins signature. 46 65 - T 01-11-2018 IPR020816 Histone-like DNA-binding protein, conserved site GO:0003677 CDA09_15740 ee0446768ecbd7d6b7ce6146fc58ef93 90 Gene3D G3DSA:4.10.520.10 1 90 1.3E-34 T 01-11-2018 IPR010992 Integration host factor (IHF)-like DNA-binding domain superfamily GO:0003677 CDA09_15740 ee0446768ecbd7d6b7ce6146fc58ef93 90 PRINTS PR01727 Prokaryotic integration host factor signature 74 88 1.0E-18 T 01-11-2018 IPR000119 Histone-like DNA-binding protein GO:0003677 CDA09_15740 ee0446768ecbd7d6b7ce6146fc58ef93 90 PRINTS PR01727 Prokaryotic integration host factor signature 40 55 1.0E-18 T 01-11-2018 IPR000119 Histone-like DNA-binding protein GO:0003677 CDA09_15740 ee0446768ecbd7d6b7ce6146fc58ef93 90 PRINTS PR01727 Prokaryotic integration host factor signature 58 71 1.0E-18 T 01-11-2018 IPR000119 Histone-like DNA-binding protein GO:0003677 CDA09_19455 11387b60529b488de2876c0c498de430 131 Gene3D G3DSA:3.30.1490.10 78 130 5.4E-24 T 01-11-2018 CDA09_19455 11387b60529b488de2876c0c498de430 131 Pfam PF00410 Ribosomal protein S8 5 130 4.2E-49 T 01-11-2018 IPR000630 Ribosomal protein S8 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 CDA09_19455 11387b60529b488de2876c0c498de430 131 Gene3D G3DSA:3.30.1370.30 4 77 5.5E-27 T 01-11-2018 CDA09_19455 11387b60529b488de2876c0c498de430 131 ProSitePatterns PS00053 Ribosomal protein S8 signature. 101 118 - T 01-11-2018 IPR000630 Ribosomal protein S8 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 CDA09_19455 11387b60529b488de2876c0c498de430 131 SUPERFAMILY SSF56047 2 130 2.09E-46 T 01-11-2018 IPR035987 Ribosomal protein S8 superfamily GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 CDA09_19455 11387b60529b488de2876c0c498de430 131 Hamap MF_01302_B 30S ribosomal protein S8 [rpsH]. 2 131 32.114 T 01-11-2018 IPR000630 Ribosomal protein S8 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 CDA09_17645 482c5fa791a08ef9669426aef9ecdec0 127 SUPERFAMILY SSF54593 1 126 2.01E-37 T 01-11-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase CDA09_17645 482c5fa791a08ef9669426aef9ecdec0 127 TIGRFAM TIGR00068 glyox_I: lactoylglutathione lyase 2 126 1.5E-66 T 01-11-2018 IPR004361 Glyoxalase I GO:0004462|GO:0046872 KEGG: 00620+4.4.1.5|MetaCyc: PWY-5386|Reactome: R-HSA-70268 CDA09_17645 482c5fa791a08ef9669426aef9ecdec0 127 ProSitePatterns PS00935 Glyoxalase I signature 2. 69 81 - T 01-11-2018 IPR018146 Glyoxalase I, conserved site GO:0004462|GO:0046872 KEGG: 00620+4.4.1.5|MetaCyc: PWY-5386|Reactome: R-HSA-70268 CDA09_17645 482c5fa791a08ef9669426aef9ecdec0 127 Gene3D G3DSA:3.10.180.10 1 127 1.7E-50 T 01-11-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase CDA09_17645 482c5fa791a08ef9669426aef9ecdec0 127 Pfam PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily 3 123 9.9E-26 T 01-11-2018 IPR004360 Glyoxalase/fosfomycin resistance/dioxygenase domain CDA09_17645 482c5fa791a08ef9669426aef9ecdec0 127 ProSitePatterns PS00934 Glyoxalase I signature 1. 5 26 - T 01-11-2018 IPR018146 Glyoxalase I, conserved site GO:0004462|GO:0046872 KEGG: 00620+4.4.1.5|MetaCyc: PWY-5386|Reactome: R-HSA-70268 CDA09_19405 d6a40af6cc89f44d159efaf260167655 129 SUPERFAMILY SSF53137 14 129 1.31E-47 T 01-11-2018 CDA09_19405 d6a40af6cc89f44d159efaf260167655 129 ProSitePatterns PS00054 Ribosomal protein S11 signature. 97 119 - T 01-11-2018 IPR018102 Ribosomal S11, conserved site CDA09_19405 d6a40af6cc89f44d159efaf260167655 129 PIRSF PIRSF002131 1 129 3.0E-53 T 01-11-2018 IPR001971 Ribosomal protein S11 GO:0003735|GO:0005840|GO:0006412 CDA09_19405 d6a40af6cc89f44d159efaf260167655 129 Gene3D G3DSA:3.30.420.80 1 129 5.5E-57 T 01-11-2018 IPR036967 Ribosomal protein S11 superfamily GO:0003735|GO:0005840|GO:0006412 CDA09_19405 d6a40af6cc89f44d159efaf260167655 129 TIGRFAM TIGR03632 uS11_bact: ribosomal protein uS11 10 126 1.3E-56 T 01-11-2018 IPR019981 Ribosomal protein S11, bacterial-type GO:0003735|GO:0005622|GO:0005840|GO:0006412 CDA09_19405 d6a40af6cc89f44d159efaf260167655 129 Hamap MF_01310 30S ribosomal protein S11 [rpsK]. 3 129 32.823 T 01-11-2018 IPR001971 Ribosomal protein S11 GO:0003735|GO:0005840|GO:0006412 CDA09_19405 d6a40af6cc89f44d159efaf260167655 129 Pfam PF00411 Ribosomal protein S11 19 128 1.1E-50 T 01-11-2018 IPR001971 Ribosomal protein S11 GO:0003735|GO:0005840|GO:0006412 CDA09_02780 64386282cfc27e76301ceaa6cf995206 387 TIGRFAM TIGR01730 RND_mfp: efflux transporter, RND family, MFP subunit 35 365 2.6E-52 T 01-11-2018 IPR006143 RND efflux pump, membrane fusion protein GO:0005215|GO:0016020|GO:0055085 CDA09_02780 64386282cfc27e76301ceaa6cf995206 387 Gene3D G3DSA:2.40.50.100 59 225 3.0E-73 T 01-11-2018 CDA09_02780 64386282cfc27e76301ceaa6cf995206 387 SUPERFAMILY SSF111369 49 209 1.44E-13 T 01-11-2018 CDA09_02780 64386282cfc27e76301ceaa6cf995206 387 Pfam PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion 61 288 1.1E-14 T 01-11-2018 IPR032317 RND efflux pump, membrane fusion protein, barrel-sandwich domain CDA09_02780 64386282cfc27e76301ceaa6cf995206 387 Gene3D G3DSA:1.10.287.470 93 184 3.0E-73 T 01-11-2018 CDA09_02780 64386282cfc27e76301ceaa6cf995206 387 Gene3D G3DSA:2.40.30.170 46 306 3.0E-73 T 01-11-2018 CDA09_02780 64386282cfc27e76301ceaa6cf995206 387 Gene3D G3DSA:2.40.420.20 43 363 3.0E-73 T 01-11-2018 CDA09_11335 fa96d847f093cb6915a3592d1bc78864 144 Gene3D G3DSA:3.30.1130.10 1 118 3.4E-30 T 01-11-2018 CDA09_11335 fa96d847f093cb6915a3592d1bc78864 144 Pfam PF02152 Dihydroneopterin aldolase 4 113 1.5E-23 T 01-11-2018 IPR006157 Dihydroneopterin aldolase/epimerase domain GO:0004150|GO:0006760 KEGG: 00790+4.1.2.25|MetaCyc: PWY-6147|MetaCyc: PWY-6148|MetaCyc: PWY-6797|MetaCyc: PWY-7539 CDA09_11335 fa96d847f093cb6915a3592d1bc78864 144 SMART SM00905 4 114 1.4E-32 T 01-11-2018 IPR006157 Dihydroneopterin aldolase/epimerase domain GO:0004150|GO:0006760 KEGG: 00790+4.1.2.25|MetaCyc: PWY-6147|MetaCyc: PWY-6148|MetaCyc: PWY-6797|MetaCyc: PWY-7539 CDA09_11335 fa96d847f093cb6915a3592d1bc78864 144 SUPERFAMILY SSF55620 1 116 6.12E-29 T 01-11-2018 CDA09_11335 fa96d847f093cb6915a3592d1bc78864 144 TIGRFAM TIGR00526 folB_dom: FolB domain 1 116 1.7E-20 T 01-11-2018 IPR006157 Dihydroneopterin aldolase/epimerase domain GO:0004150|GO:0006760 KEGG: 00790+4.1.2.25|MetaCyc: PWY-6147|MetaCyc: PWY-6148|MetaCyc: PWY-6797|MetaCyc: PWY-7539 CDA09_02280 4bed4fb4a883924618f75d70cfd157fa 307 SUPERFAMILY SSF51569 1 295 6.59E-78 T 01-11-2018 CDA09_02280 4bed4fb4a883924618f75d70cfd157fa 307 Gene3D G3DSA:3.20.20.70 1 300 3.6E-142 T 01-11-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 CDA09_02280 4bed4fb4a883924618f75d70cfd157fa 307 Pfam PF00682 HMGL-like 7 279 3.0E-59 T 01-11-2018 IPR000891 Pyruvate carboxyltransferase GO:0003824 CDA09_13910 fe87bac05211df132654fcac16a08445 229 SUPERFAMILY SSF46689 37 110 6.48E-15 T 01-11-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 CDA09_13910 fe87bac05211df132654fcac16a08445 229 Gene3D G3DSA:1.10.357.10 38 226 4.0E-22 T 01-11-2018 CDA09_13910 fe87bac05211df132654fcac16a08445 229 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 70 93 1.9E-6 T 01-11-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 CDA09_13910 fe87bac05211df132654fcac16a08445 229 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 49 62 1.9E-6 T 01-11-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 CDA09_13910 fe87bac05211df132654fcac16a08445 229 Pfam PF00440 Bacterial regulatory proteins, tetR family 49 94 2.9E-10 T 01-11-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 CDA09_06055 64be6cac05899e420efa4e099cb41223 125 Pfam PF01245 Ribosomal protein L19 2 115 3.4E-48 T 01-11-2018 IPR001857 Ribosomal protein L19 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 CDA09_06055 64be6cac05899e420efa4e099cb41223 125 TIGRFAM TIGR01024 rplS_bact: ribosomal protein bL19 1 115 1.0E-50 T 01-11-2018 IPR001857 Ribosomal protein L19 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 CDA09_06055 64be6cac05899e420efa4e099cb41223 125 SUPERFAMILY SSF50104 1 118 5.21E-46 T 01-11-2018 IPR008991 Translation protein SH3-like domain superfamily CDA09_06055 64be6cac05899e420efa4e099cb41223 125 Hamap MF_00402 50S ribosomal protein L19 [rplS]. 2 116 31.139 T 01-11-2018 IPR001857 Ribosomal protein L19 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 CDA09_06055 64be6cac05899e420efa4e099cb41223 125 Gene3D G3DSA:2.30.30.790 2 120 3.2E-16 T 01-11-2018 IPR038657 Ribosomal protein L19 superfamily Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 CDA09_06055 64be6cac05899e420efa4e099cb41223 125 ProSitePatterns PS01015 Ribosomal protein L19 signature. 88 103 - T 01-11-2018 IPR018257 Ribosomal protein L19, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 CDA09_06055 64be6cac05899e420efa4e099cb41223 125 PRINTS PR00061 Ribosomal protein L19 signature 36 65 1.8E-36 T 01-11-2018 IPR001857 Ribosomal protein L19 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 CDA09_06055 64be6cac05899e420efa4e099cb41223 125 PRINTS PR00061 Ribosomal protein L19 signature 6 35 1.8E-36 T 01-11-2018 IPR001857 Ribosomal protein L19 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 CDA09_06055 64be6cac05899e420efa4e099cb41223 125 PRINTS PR00061 Ribosomal protein L19 signature 90 115 1.8E-36 T 01-11-2018 IPR001857 Ribosomal protein L19 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 CDA09_06055 64be6cac05899e420efa4e099cb41223 125 PIRSF PIRSF002191 1 125 9.3E-52 T 01-11-2018 IPR001857 Ribosomal protein L19 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 CDA09_03385 a96d1fbc2b249090f4148eef7ac8cb21 334 Pfam PF03466 LysR substrate binding domain 96 312 1.7E-29 T 01-11-2018 IPR005119 LysR, substrate-binding CDA09_03385 a96d1fbc2b249090f4148eef7ac8cb21 334 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 36 46 6.4E-6 T 01-11-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 CDA09_03385 a96d1fbc2b249090f4148eef7ac8cb21 334 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 25 36 6.4E-6 T 01-11-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 CDA09_03385 a96d1fbc2b249090f4148eef7ac8cb21 334 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 46 57 6.4E-6 T 01-11-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 CDA09_03385 a96d1fbc2b249090f4148eef7ac8cb21 334 SUPERFAMILY SSF53850 97 314 8.28E-30 T 01-11-2018 CDA09_03385 a96d1fbc2b249090f4148eef7ac8cb21 334 Gene3D G3DSA:3.40.190.10 165 261 1.7E-51 T 01-11-2018 CDA09_03385 a96d1fbc2b249090f4148eef7ac8cb21 334 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 12 69 7.0E-21 T 01-11-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 CDA09_03385 a96d1fbc2b249090f4148eef7ac8cb21 334 Gene3D G3DSA:1.10.10.10 9 98 3.3E-26 T 01-11-2018 IPR036388 Winged helix-like DNA-binding domain superfamily CDA09_03385 a96d1fbc2b249090f4148eef7ac8cb21 334 Gene3D G3DSA:3.40.190.10 105 264 1.7E-51 T 01-11-2018 CDA09_03385 a96d1fbc2b249090f4148eef7ac8cb21 334 SUPERFAMILY SSF46785 8 87 1.36E-22 T 01-11-2018 IPR036390 Winged helix DNA-binding domain superfamily CDA09_08390 a984e757ec899be1d350f65a3eb44493 479 ProSitePatterns PS00699 Nitrogenases component 1 alpha and beta subunits signature 1. 63 70 - T 01-11-2018 IPR000318 Nitrogenase component 1, conserved site GO:0009399|GO:0016163 CDA09_08390 a984e757ec899be1d350f65a3eb44493 479 TIGRFAM TIGR01283 nifE: nitrogenase MoFe cofactor biosynthesis protein NifE 6 458 7.5E-190 T 01-11-2018 IPR005973 Nitrogenase MoFe cofactor biosynthesis protein NifE GO:0009399|GO:0065003 CDA09_08390 a984e757ec899be1d350f65a3eb44493 479 Gene3D G3DSA:3.40.50.12380 182 452 1.4E-103 T 01-11-2018 CDA09_08390 a984e757ec899be1d350f65a3eb44493 479 Pfam PF00148 Nitrogenase component 1 type Oxidoreductase 45 444 1.1E-103 T 01-11-2018 IPR000510 Nitrogenase/oxidoreductase, component 1 GO:0016491|GO:0055114 CDA09_08390 a984e757ec899be1d350f65a3eb44493 479 SUPERFAMILY SSF53807 20 458 2.06E-135 T 01-11-2018 CDA09_08390 a984e757ec899be1d350f65a3eb44493 479 ProSitePatterns PS00090 Nitrogenases component 1 alpha and beta subunits signature 2. 129 143 - T 01-11-2018 IPR000318 Nitrogenase component 1, conserved site GO:0009399|GO:0016163 CDA09_08390 a984e757ec899be1d350f65a3eb44493 479 Gene3D G3DSA:3.40.50.1980 31 181 2.4E-47 T 01-11-2018 CDA09_01640 2992c5f17d8a37401da04fe6197b6e18 483 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 287 452 5.4E-33 T 01-11-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 CDA09_01640 2992c5f17d8a37401da04fe6197b6e18 483 Gene3D G3DSA:1.10.287.950 203 483 2.9E-55 T 01-11-2018 CDA09_01640 2992c5f17d8a37401da04fe6197b6e18 483 SMART SM00283 226 483 4.3E-43 T 01-11-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 CDA09_01640 2992c5f17d8a37401da04fe6197b6e18 483 Gene3D G3DSA:1.20.1440.210 47 172 8.5E-6 T 01-11-2018 CDA09_01640 2992c5f17d8a37401da04fe6197b6e18 483 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 401 430 2.5E-24 T 01-11-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 CDA09_01640 2992c5f17d8a37401da04fe6197b6e18 483 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 247 276 2.5E-24 T 01-11-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 CDA09_01640 2992c5f17d8a37401da04fe6197b6e18 483 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 324 351 2.5E-24 T 01-11-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 CDA09_01640 2992c5f17d8a37401da04fe6197b6e18 483 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 353 382 2.5E-24 T 01-11-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 CDA09_01640 2992c5f17d8a37401da04fe6197b6e18 483 SUPERFAMILY SSF58104 212 482 8.2E-56 T 01-11-2018 CDA09_01640 2992c5f17d8a37401da04fe6197b6e18 483 Pfam PF05227 CHASE3 domain 48 174 3.4E-8 T 01-11-2018 IPR007891 CHASE3 CDA09_18325 aca419ae15184207be61c32f4fbeab68 136 SUPERFAMILY SSF54197 1 136 2.17E-40 T 01-11-2018 IPR036265 HIT-like superfamily CDA09_18325 aca419ae15184207be61c32f4fbeab68 136 ProSitePatterns PS00892 HIT domain signature. 86 104 - T 01-11-2018 IPR019808 Histidine triad, conserved site CDA09_18325 aca419ae15184207be61c32f4fbeab68 136 PRINTS PR00332 Histidine triad family signature 93 103 2.1E-14 T 01-11-2018 IPR001310 Histidine triad (HIT) protein CDA09_18325 aca419ae15184207be61c32f4fbeab68 136 PRINTS PR00332 Histidine triad family signature 26 44 2.1E-14 T 01-11-2018 IPR001310 Histidine triad (HIT) protein CDA09_18325 aca419ae15184207be61c32f4fbeab68 136 PRINTS PR00332 Histidine triad family signature 5 21 2.1E-14 T 01-11-2018 IPR001310 Histidine triad (HIT) protein CDA09_18325 aca419ae15184207be61c32f4fbeab68 136 Pfam PF01230 HIT domain 12 106 3.7E-21 T 01-11-2018 IPR001310 Histidine triad (HIT) protein CDA09_18325 aca419ae15184207be61c32f4fbeab68 136 Gene3D G3DSA:3.30.428.10 1 136 2.4E-44 T 01-11-2018 IPR036265 HIT-like superfamily CDA09_21885 a9efa3fd71850fc30c0cd3a143f71eed 60 Gene3D G3DSA:2.30.30.1070 1 60 1.9E-31 T 01-11-2018 IPR038640 Benzylsuccinate synthase gamma subunit superfamily KEGG: 00623+4.1.99.11|MetaCyc: PWY-81 CDA09_21885 a9efa3fd71850fc30c0cd3a143f71eed 60 Pfam PF08201 BssC/TutF protein 4 57 4.2E-25 T 01-11-2018 IPR013161 Benzylsuccinate synthase gamma subunit KEGG: 00623+4.1.99.11|MetaCyc: PWY-81 CDA09_03985 7b599b7592406421871521d67e6ee88e 296 Pfam PF04794 YdjC-like protein 15 280 3.7E-47 T 01-11-2018 IPR006879 Carbohydrate deacetylase YdjC-like CDA09_03985 7b599b7592406421871521d67e6ee88e 296 SUPERFAMILY SSF88713 13 292 6.45E-61 T 01-11-2018 IPR011330 Glycoside hydrolase/deacetylase, beta/alpha-barrel GO:0003824|GO:0005975 CDA09_03985 7b599b7592406421871521d67e6ee88e 296 Gene3D G3DSA:3.20.20.370 12 292 2.5E-36 T 01-11-2018 CDA09_03295 bdd55277a9151f78d3d60bb17bc69c71 289 ProSitePatterns PS00444 Polyprenyl synthases signature 2. 208 220 - T 01-11-2018 IPR033749 Polyprenyl synthetase, conserved site CDA09_03295 bdd55277a9151f78d3d60bb17bc69c71 289 Gene3D G3DSA:1.10.600.10 1 289 4.0E-92 T 01-11-2018 IPR008949 Isoprenoid synthase domain superfamily CDA09_03295 bdd55277a9151f78d3d60bb17bc69c71 289 Pfam PF00348 Polyprenyl synthetase 24 252 1.6E-52 T 01-11-2018 IPR000092 Polyprenyl synthetase GO:0008299 CDA09_03295 bdd55277a9151f78d3d60bb17bc69c71 289 SUPERFAMILY SSF48576 3 281 7.81E-82 T 01-11-2018 IPR008949 Isoprenoid synthase domain superfamily CDA09_03295 bdd55277a9151f78d3d60bb17bc69c71 289 ProSitePatterns PS00723 Polyprenyl synthases signature 1. 75 91 - T 01-11-2018 IPR033749 Polyprenyl synthetase, conserved site CDA09_10915 59588b40d46957595ba550a54c1e6ed0 272 Pfam PF01012 Electron transfer flavoprotein domain 36 195 1.3E-14 T 01-11-2018 IPR014730 Electron transfer flavoprotein, alpha/beta-subunit, N-terminal Reactome: R-HSA-611105 CDA09_10915 59588b40d46957595ba550a54c1e6ed0 272 SMART SM00893 24 203 0.0048 T 01-11-2018 IPR014730 Electron transfer flavoprotein, alpha/beta-subunit, N-terminal Reactome: R-HSA-611105 CDA09_10915 59588b40d46957595ba550a54c1e6ed0 272 Gene3D G3DSA:3.40.50.620 16 272 8.3E-38 T 01-11-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold CDA09_10915 59588b40d46957595ba550a54c1e6ed0 272 SUPERFAMILY SSF52402 35 188 1.09E-20 T 01-11-2018 CDA09_08880 602fcbb555ff0ee9902a564f7b87d1dc 266 SUPERFAMILY SSF52540 24 201 1.26E-30 T 01-11-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CDA09_08880 602fcbb555ff0ee9902a564f7b87d1dc 266 Pfam PF07728 AAA domain (dynein-related subfamily) 33 166 2.2E-34 T 01-11-2018 IPR011704 ATPase, dynein-related, AAA domain GO:0005524|GO:0016887 CDA09_08880 602fcbb555ff0ee9902a564f7b87d1dc 266 Pfam PF08406 CbbQ/NirQ/NorQ C-terminal 179 262 1.7E-30 T 01-11-2018 IPR013615 CbbQ/NirQ/NorQ, C-terminal CDA09_08880 602fcbb555ff0ee9902a564f7b87d1dc 266 Gene3D G3DSA:3.40.50.300 17 189 3.6E-29 T 01-11-2018 CDA09_10400 495c8d8abcc40e3d702e65e50ab0caa6 310 SUPERFAMILY SSF54593 1 293 5.65E-43 T 01-11-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase CDA09_10400 495c8d8abcc40e3d702e65e50ab0caa6 310 Gene3D G3DSA:3.10.180.10 152 290 3.2E-37 T 01-11-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase CDA09_10400 495c8d8abcc40e3d702e65e50ab0caa6 310 Pfam PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily 10 120 1.0E-5 T 01-11-2018 IPR004360 Glyoxalase/fosfomycin resistance/dioxygenase domain CDA09_10400 495c8d8abcc40e3d702e65e50ab0caa6 310 Pfam PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily 151 267 8.7E-16 T 01-11-2018 IPR004360 Glyoxalase/fosfomycin resistance/dioxygenase domain CDA09_10400 495c8d8abcc40e3d702e65e50ab0caa6 310 Gene3D G3DSA:3.10.180.10 1 129 3.2E-38 T 01-11-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase CDA09_10400 495c8d8abcc40e3d702e65e50ab0caa6 310 ProSitePatterns PS00082 Extradiol ring-cleavage dioxygenases signature. 246 267 - T 01-11-2018 IPR000486 Extradiol ring-cleavage dioxygenase, class I /II GO:0003824|GO:0006725|GO:0008198|GO:0055114 CDA09_10400 495c8d8abcc40e3d702e65e50ab0caa6 310 TIGRFAM TIGR03211 catechol_2_3: catechol 2,3 dioxygenase 5 309 1.8E-126 T 01-11-2018 IPR017624 Catechol 2,3 dioxygenase GO:0008198|GO:0018577|GO:0019439|GO:0055114 KEGG: 00361+1.13.11.2|KEGG: 00362+1.13.11.2|KEGG: 00622+1.13.11.2|KEGG: 00643+1.13.11.2|MetaCyc: PWY-5419|MetaCyc: PWY-5641 CDA09_11570 585e31b2bbbc818c83a36bd8f713c491 141 SUPERFAMILY SSF55239 1 132 7.98E-51 T 01-11-2018 IPR036385 Ribulose bisphosphate carboxylase, small subunit superfamily KEGG: 00630+4.1.1.39|KEGG: 00710+4.1.1.39|MetaCyc: PWY-5532|MetaCyc: PWY-5723 CDA09_11570 585e31b2bbbc818c83a36bd8f713c491 141 Gene3D G3DSA:3.30.190.10 1 139 7.8E-54 T 01-11-2018 IPR036385 Ribulose bisphosphate carboxylase, small subunit superfamily KEGG: 00630+4.1.1.39|KEGG: 00710+4.1.1.39|MetaCyc: PWY-5532|MetaCyc: PWY-5723 CDA09_11570 585e31b2bbbc818c83a36bd8f713c491 141 Pfam PF00101 Ribulose bisphosphate carboxylase, small chain 5 103 6.6E-38 T 01-11-2018 IPR000894 Ribulose bisphosphate carboxylase small chain, domain KEGG: 00630+4.1.1.39|KEGG: 00710+4.1.1.39|MetaCyc: PWY-5532|MetaCyc: PWY-5723 CDA09_11570 585e31b2bbbc818c83a36bd8f713c491 141 SMART SM00961 4 103 2.4E-48 T 01-11-2018 IPR000894 Ribulose bisphosphate carboxylase small chain, domain KEGG: 00630+4.1.1.39|KEGG: 00710+4.1.1.39|MetaCyc: PWY-5532|MetaCyc: PWY-5723 CDA09_19925 408fcad673759e4bcdd141b7c86d18ea 223 SMART SM00895 83 207 1.7E-21 T 01-11-2018 IPR011711 GntR, C-terminal CDA09_19925 408fcad673759e4bcdd141b7c86d18ea 223 Pfam PF07729 FCD domain 83 206 7.6E-29 T 01-11-2018 IPR011711 GntR, C-terminal CDA09_19925 408fcad673759e4bcdd141b7c86d18ea 223 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 47 63 2.1E-6 T 01-11-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 CDA09_19925 408fcad673759e4bcdd141b7c86d18ea 223 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 33 47 2.1E-6 T 01-11-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 CDA09_19925 408fcad673759e4bcdd141b7c86d18ea 223 SUPERFAMILY SSF46785 6 77 1.23E-21 T 01-11-2018 IPR036390 Winged helix DNA-binding domain superfamily CDA09_19925 408fcad673759e4bcdd141b7c86d18ea 223 Gene3D G3DSA:1.20.120.530 76 213 9.3E-31 T 01-11-2018 IPR008920 Transcription regulator FadR/GntR, C-terminal CDA09_19925 408fcad673759e4bcdd141b7c86d18ea 223 Pfam PF00392 Bacterial regulatory proteins, gntR family 11 73 2.4E-20 T 01-11-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 CDA09_19925 408fcad673759e4bcdd141b7c86d18ea 223 Gene3D G3DSA:1.10.10.10 9 75 2.9E-24 T 01-11-2018 IPR036388 Winged helix-like DNA-binding domain superfamily CDA09_19925 408fcad673759e4bcdd141b7c86d18ea 223 SMART SM00345 15 73 2.8E-18 T 01-11-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 CDA09_19925 408fcad673759e4bcdd141b7c86d18ea 223 SUPERFAMILY SSF48008 80 212 1.23E-28 T 01-11-2018 IPR008920 Transcription regulator FadR/GntR, C-terminal CDA09_20415 3077454be99e41300da18e20c61e2c11 271 SUPERFAMILY SSF51366 2 261 9.06E-79 T 01-11-2018 IPR011060 Ribulose-phosphate binding barrel GO:0003824 CDA09_20415 3077454be99e41300da18e20c61e2c11 271 Hamap MF_01215 Orotidine 5'-phosphate decarboxylase [pyrF]. 2 269 35.594 T 01-11-2018 IPR011995 Orotidine 5'-phosphate decarboxylase, type 2 GO:0004590|GO:0006221 KEGG: 00240+4.1.1.23|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791 CDA09_20415 3077454be99e41300da18e20c61e2c11 271 SMART SM00934 17 256 2.7E-49 T 01-11-2018 IPR001754 Orotidine 5'-phosphate decarboxylase domain GO:0004590|GO:0006207 KEGG: 00240+4.1.1.23|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791|Reactome: R-HSA-500753 CDA09_20415 3077454be99e41300da18e20c61e2c11 271 Gene3D G3DSA:3.20.20.70 1 271 3.2E-100 T 01-11-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 CDA09_20415 3077454be99e41300da18e20c61e2c11 271 Pfam PF00215 Orotidine 5'-phosphate decarboxylase / HUMPS family 17 253 2.8E-29 T 01-11-2018 IPR001754 Orotidine 5'-phosphate decarboxylase domain GO:0004590|GO:0006207 KEGG: 00240+4.1.1.23|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791|Reactome: R-HSA-500753 CDA09_20415 3077454be99e41300da18e20c61e2c11 271 TIGRFAM TIGR02127 pyrF_sub2: orotidine 5'-phosphate decarboxylase 3 256 3.8E-74 T 01-11-2018 IPR011995 Orotidine 5'-phosphate decarboxylase, type 2 GO:0004590|GO:0006221 KEGG: 00240+4.1.1.23|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791 CDA09_20415 3077454be99e41300da18e20c61e2c11 271 ProSitePatterns PS00156 Orotidine 5'-phosphate decarboxylase active site. 90 103 - T 01-11-2018 IPR018089 Orotidine 5'-phosphate decarboxylase, active site GO:0004590|GO:0006207 KEGG: 00240+4.1.1.23|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791|Reactome: R-HSA-500753 CDA09_02430 96f71f535103e5e68ea63c713b9310c9 308 SUPERFAMILY SSF56349 18 298 6.77E-54 T 01-11-2018 IPR011010 DNA breaking-rejoining enzyme, catalytic core GO:0003677 CDA09_02430 96f71f535103e5e68ea63c713b9310c9 308 Gene3D G3DSA:1.10.150.130 17 108 1.1E-14 T 01-11-2018 IPR010998 Integrase/recombinase, N-terminal CDA09_02430 96f71f535103e5e68ea63c713b9310c9 308 Hamap MF_01808 Tyrosine recombinase XerC [xerC]. 17 305 55.691 T 01-11-2018 IPR023009 Tyrosine recombinase XerC/XerD CDA09_02430 96f71f535103e5e68ea63c713b9310c9 308 TIGRFAM TIGR02224 recomb_XerC: tyrosine recombinase XerC 21 307 1.7E-101 T 01-11-2018 IPR011931 Tyrosine recombinase XerC GO:0003677|GO:0006310|GO:0007059|GO:0015074|GO:0051301 CDA09_02430 96f71f535103e5e68ea63c713b9310c9 308 Pfam PF02899 Phage integrase, N-terminal SAM-like domain 19 98 2.8E-17 T 01-11-2018 IPR004107 Integrase, SAM-like, N-terminal GO:0003677|GO:0015074 CDA09_02430 96f71f535103e5e68ea63c713b9310c9 308 Gene3D G3DSA:1.10.443.10 121 299 5.9E-54 T 01-11-2018 IPR013762 Integrase-like, catalytic domain superfamily GO:0003677|GO:0006310|GO:0015074 CDA09_02430 96f71f535103e5e68ea63c713b9310c9 308 Pfam PF00589 Phage integrase family 122 291 3.9E-43 T 01-11-2018 IPR002104 Integrase, catalytic domain GO:0003677|GO:0006310|GO:0015074 CDA09_01305 c3611241a70f079b3c18d81d350f5750 70 TIGRFAM TIGR03141 cytochro_ccmD: heme exporter protein CcmD 10 55 9.4E-16 T 01-11-2018 IPR007078 Haem exporter protein D (CcmD) GO:0015886|GO:0016021|GO:0017004 CDA09_01305 c3611241a70f079b3c18d81d350f5750 70 Pfam PF04995 Heme exporter protein D (CcmD) 13 54 5.0E-13 T 01-11-2018 IPR007078 Haem exporter protein D (CcmD) GO:0015886|GO:0016021|GO:0017004 CDA09_08130 5bf75c94e93589344674578554e390c1 484 SUPERFAMILY SSF48452 261 446 3.21E-9 T 01-11-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 CDA09_08130 5bf75c94e93589344674578554e390c1 484 Pfam PF01435 Peptidase family M48 64 248 2.6E-34 T 01-11-2018 IPR001915 Peptidase M48 GO:0004222|GO:0006508 CDA09_08130 5bf75c94e93589344674578554e390c1 484 Gene3D G3DSA:1.25.40.10 250 467 1.5E-8 T 01-11-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 CDA09_08130 5bf75c94e93589344674578554e390c1 484 Hamap MF_00997 Beta-barrel assembly-enhancing protease [bepA]. 2 474 30.418 T 01-11-2018 IPR030873 Beta-barrel assembly-enhancing protease GO:0006508|GO:0008237|GO:0016020|GO:0061077 CDA09_08130 5bf75c94e93589344674578554e390c1 484 Gene3D G3DSA:3.30.2010.10 58 144 8.1E-6 T 01-11-2018 CDA09_18000 2ad9cc371e0002465088d681d988c24d 235 Pfam PF00498 FHA domain 23 86 1.6E-18 T 01-11-2018 IPR000253 Forkhead-associated (FHA) domain GO:0005515 CDA09_18000 2ad9cc371e0002465088d681d988c24d 235 SUPERFAMILY SSF49879 3 93 5.93E-28 T 01-11-2018 IPR008984 SMAD/FHA domain superfamily GO:0005515 CDA09_18000 2ad9cc371e0002465088d681d988c24d 235 SUPERFAMILY SSF49879 151 231 4.4E-8 T 01-11-2018 IPR008984 SMAD/FHA domain superfamily GO:0005515 CDA09_18000 2ad9cc371e0002465088d681d988c24d 235 SMART SM00240 22 72 3.6E-15 T 01-11-2018 IPR000253 Forkhead-associated (FHA) domain GO:0005515 CDA09_18000 2ad9cc371e0002465088d681d988c24d 235 Gene3D G3DSA:2.60.200.20 3 102 2.2E-26 T 01-11-2018 CDA09_00470 64ba84b98c52cc192aceb59aca15b30e 81 PRINTS PR00124 ATP synthase C subunit signature 11 30 1.7E-6 T 01-11-2018 IPR000454 ATP synthase, F0 complex, subunit C GO:0015078|GO:0015986|GO:0045263 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 CDA09_00470 64ba84b98c52cc192aceb59aca15b30e 81 PRINTS PR00124 ATP synthase C subunit signature 49 74 1.7E-6 T 01-11-2018 IPR000454 ATP synthase, F0 complex, subunit C GO:0015078|GO:0015986|GO:0045263 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 CDA09_00470 64ba84b98c52cc192aceb59aca15b30e 81 PRINTS PR00124 ATP synthase C subunit signature 32 47 1.7E-6 T 01-11-2018 IPR000454 ATP synthase, F0 complex, subunit C GO:0015078|GO:0015986|GO:0045263 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 CDA09_00470 64ba84b98c52cc192aceb59aca15b30e 81 SUPERFAMILY SSF81333 3 78 4.18E-20 T 01-11-2018 IPR035921 F/V-ATP synthase subunit C superfamily CDA09_00470 64ba84b98c52cc192aceb59aca15b30e 81 Gene3D G3DSA:1.20.20.10 1 77 3.1E-28 T 01-11-2018 IPR038662 F1F0 ATP synthase subunit C superfamily Reactome: R-HSA-163210|Reactome: R-HSA-8949613 CDA09_00470 64ba84b98c52cc192aceb59aca15b30e 81 TIGRFAM TIGR01260 ATP_synt_c: ATP synthase F0, C subunit 20 76 4.6E-22 T 01-11-2018 IPR005953 ATP synthase, F0 complex, subunit C, bacterial/chloroplast GO:0015078|GO:0015986|GO:0045263 CDA09_00470 64ba84b98c52cc192aceb59aca15b30e 81 ProSitePatterns PS00605 ATP synthase c subunit signature. 39 60 - T 01-11-2018 IPR020537 ATP synthase, F0 complex, subunit C, DCCD-binding site Reactome: R-HSA-163210|Reactome: R-HSA-8949613 CDA09_00470 64ba84b98c52cc192aceb59aca15b30e 81 Hamap MF_01396 ATP synthase subunit c [atpH]. 9 74 14.561 T 01-11-2018 IPR000454 ATP synthase, F0 complex, subunit C GO:0015078|GO:0015986|GO:0045263 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 CDA09_00470 64ba84b98c52cc192aceb59aca15b30e 81 Pfam PF00137 ATP synthase subunit C 10 72 2.8E-12 T 01-11-2018 IPR002379 V-ATPase proteolipid subunit C-like domain GO:0015078|GO:0015991|GO:0033177 CDA09_09155 74df36c731d7b0e190ee4ac5058b4c31 287 Pfam PF13452 N-terminal half of MaoC dehydratase 50 130 6.2E-7 T 01-11-2018 IPR039569 N-terminal of MaoC-like dehydratase Reactome: R-HSA-193368|Reactome: R-HSA-2046106|Reactome: R-HSA-389887|Reactome: R-HSA-390247|Reactome: R-HSA-9033241|Reactome: R-HSA-9033500 CDA09_09155 74df36c731d7b0e190ee4ac5058b4c31 287 SUPERFAMILY SSF54637 167 281 4.7E-30 T 01-11-2018 IPR029069 HotDog domain superfamily CDA09_09155 74df36c731d7b0e190ee4ac5058b4c31 287 Gene3D G3DSA:3.10.129.10 12 287 2.6E-83 T 01-11-2018 CDA09_09155 74df36c731d7b0e190ee4ac5058b4c31 287 SUPERFAMILY SSF54637 9 158 2.49E-33 T 01-11-2018 IPR029069 HotDog domain superfamily CDA09_09155 74df36c731d7b0e190ee4ac5058b4c31 287 Pfam PF01575 MaoC like domain 166 279 2.6E-25 T 01-11-2018 IPR002539 MaoC-like dehydratase domain CDA09_14175 82fddfae59a62f5bc622dcea5f9adcde 69 SUPERFAMILY SSF46955 6 55 4.03E-9 T 01-11-2018 IPR009061 Putative DNA-binding domain superfamily CDA09_14175 82fddfae59a62f5bc622dcea5f9adcde 69 TIGRFAM TIGR01764 excise: DNA binding domain, excisionase family 7 53 1.0E-14 T 01-11-2018 IPR010093 SinI-like, DNA-binding domain GO:0003677 CDA09_14175 82fddfae59a62f5bc622dcea5f9adcde 69 Gene3D G3DSA:1.10.1660.10 3 56 1.3E-8 T 01-11-2018 CDA09_14175 82fddfae59a62f5bc622dcea5f9adcde 69 Pfam PF12728 Helix-turn-helix domain 6 54 1.0E-15 T 01-11-2018 CDA09_20225 c5e41789062bf275a7647767a1686898 133 Pfam PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase 42 129 4.9E-28 T 01-11-2018 IPR001179 FKBP-type peptidyl-prolyl cis-trans isomerase domain CDA09_20225 c5e41789062bf275a7647767a1686898 133 Gene3D G3DSA:3.10.50.40 13 133 3.5E-47 T 01-11-2018 CDA09_20225 c5e41789062bf275a7647767a1686898 133 SUPERFAMILY SSF54534 24 132 1.4E-44 T 01-11-2018 CDA09_18040 939c51fb8473b250103a247e3ec98155 123 SMART SM00363 1 67 3.0E-8 T 01-11-2018 IPR002942 RNA-binding S4 domain GO:0003723 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 CDA09_18040 939c51fb8473b250103a247e3ec98155 123 Gene3D G3DSA:3.10.290.10 1 99 3.2E-38 T 01-11-2018 IPR036986 RNA-binding S4 domain superfamily GO:0003723 CDA09_18040 939c51fb8473b250103a247e3ec98155 123 Pfam PF01479 S4 domain 1 45 1.2E-14 T 01-11-2018 IPR002942 RNA-binding S4 domain GO:0003723 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 CDA09_18040 939c51fb8473b250103a247e3ec98155 123 PIRSF PIRSF016821 1 123 6.3E-42 T 01-11-2018 IPR025708 Heat shock protein 15 GO:0003677|GO:0003727|GO:0034605|GO:0043023 CDA09_18040 939c51fb8473b250103a247e3ec98155 123 SUPERFAMILY SSF55174 1 95 3.4E-29 T 01-11-2018 CDA09_21185 40091a16d11becbb86e25e1db83365d4 371 Gene3D G3DSA:3.40.50.2300 146 275 6.0E-104 T 01-11-2018 CDA09_21185 40091a16d11becbb86e25e1db83365d4 371 SUPERFAMILY SSF53822 25 369 3.2E-93 T 01-11-2018 IPR028082 Periplasmic binding protein-like I CDA09_21185 40091a16d11becbb86e25e1db83365d4 371 Gene3D G3DSA:3.40.50.2300 26 349 6.0E-104 T 01-11-2018 CDA09_21185 40091a16d11becbb86e25e1db83365d4 371 PRINTS PR00337 Leu/Ile/Val-binding protein family signature 25 41 1.6E-5 T 01-11-2018 IPR000709 Leu/Ile/Val-binding protein GO:0006865 CDA09_21185 40091a16d11becbb86e25e1db83365d4 371 PRINTS PR00337 Leu/Ile/Val-binding protein family signature 47 63 1.6E-5 T 01-11-2018 IPR000709 Leu/Ile/Val-binding protein GO:0006865 CDA09_21185 40091a16d11becbb86e25e1db83365d4 371 PRINTS PR00337 Leu/Ile/Val-binding protein family signature 333 348 1.6E-5 T 01-11-2018 IPR000709 Leu/Ile/Val-binding protein GO:0006865 CDA09_21185 40091a16d11becbb86e25e1db83365d4 371 Pfam PF13458 Periplasmic binding protein 25 363 8.0E-60 T 01-11-2018 IPR028081 Leucine-binding protein domain CDA09_01310 bce2e9153657934c601c1207e057e673 148 SUPERFAMILY SSF82093 29 135 5.75E-40 T 01-11-2018 IPR036127 CcmE-like superfamily GO:0005886|GO:0017003|GO:0017004 CDA09_01310 bce2e9153657934c601c1207e057e673 148 Pfam PF03100 CcmE 4 130 3.4E-48 T 01-11-2018 IPR004329 CcmE/CycJ protein GO:0005886|GO:0017003|GO:0017004|GO:0020037 CDA09_01310 bce2e9153657934c601c1207e057e673 148 Hamap MF_01959 Cytochrome c-type biogenesis protein CcmE [ccmE]. 1 140 32.43 T 01-11-2018 IPR004329 CcmE/CycJ protein GO:0005886|GO:0017003|GO:0017004|GO:0020037 CDA09_01310 bce2e9153657934c601c1207e057e673 148 Gene3D G3DSA:2.40.50.140 29 136 2.9E-40 T 01-11-2018 CDA09_13065 942015408d4712a8888dc0205dd6bc03 123 SUPERFAMILY SSF47413 59 117 3.05E-5 T 01-11-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 CDA09_13065 942015408d4712a8888dc0205dd6bc03 123 Gene3D G3DSA:1.10.260.40 55 119 3.7E-5 T 01-11-2018 CDA09_05625 b7078cd025fff46e7988ed00edb0a131 358 Pfam PF02423 Ornithine cyclodeaminase/mu-crystallin family 29 317 1.6E-97 T 01-11-2018 IPR003462 Ornithine cyclodeaminase/mu-crystallin Reactome: R-HSA-71064 CDA09_05625 b7078cd025fff46e7988ed00edb0a131 358 Gene3D G3DSA:3.40.50.720 133 301 4.8E-123 T 01-11-2018 CDA09_05625 b7078cd025fff46e7988ed00edb0a131 358 Gene3D G3DSA:3.30.1780.10 25 339 4.8E-123 T 01-11-2018 IPR023401 Ornithine cyclodeaminase, N-terminal Reactome: R-HSA-71064 CDA09_05625 b7078cd025fff46e7988ed00edb0a131 358 SUPERFAMILY SSF51735 7 340 2.71E-96 T 01-11-2018 IPR036291 NAD(P)-binding domain superfamily CDA09_13645 f05d9d288df8a97c17f09d93e16fbb8e 423 SUPERFAMILY SSF103473 16 411 2.62E-45 T 01-11-2018 IPR036259 MFS transporter superfamily CDA09_13645 f05d9d288df8a97c17f09d93e16fbb8e 423 Pfam PF07690 Major Facilitator Superfamily 30 374 1.0E-31 T 01-11-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 CDA09_13645 f05d9d288df8a97c17f09d93e16fbb8e 423 Gene3D G3DSA:1.20.1250.20 226 413 1.1E-17 T 01-11-2018 CDA09_13645 f05d9d288df8a97c17f09d93e16fbb8e 423 Gene3D G3DSA:1.20.1250.20 14 208 8.3E-18 T 01-11-2018 CDA09_07730 69e5d62d70ce467ac249bf5f91ffe819 302 Pfam PF00512 His Kinase A (phospho-acceptor) domain 42 144 1.2E-10 T 01-11-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 CDA09_07730 69e5d62d70ce467ac249bf5f91ffe819 302 SMART SM00388 41 144 7.4E-4 T 01-11-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 CDA09_07730 69e5d62d70ce467ac249bf5f91ffe819 302 SUPERFAMILY SSF47384 36 84 3.34E-5 T 01-11-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 CDA09_07730 69e5d62d70ce467ac249bf5f91ffe819 302 SUPERFAMILY SSF55874 133 290 1.31E-46 T 01-11-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily CDA09_07730 69e5d62d70ce467ac249bf5f91ffe819 302 Gene3D G3DSA:3.30.565.10 144 298 1.2E-45 T 01-11-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily CDA09_07730 69e5d62d70ce467ac249bf5f91ffe819 302 PRINTS PR00344 Bacterial sensor protein C-terminal signature 221 235 8.0E-22 T 01-11-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 CDA09_07730 69e5d62d70ce467ac249bf5f91ffe819 302 PRINTS PR00344 Bacterial sensor protein C-terminal signature 276 289 8.0E-22 T 01-11-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 CDA09_07730 69e5d62d70ce467ac249bf5f91ffe819 302 PRINTS PR00344 Bacterial sensor protein C-terminal signature 239 249 8.0E-22 T 01-11-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 CDA09_07730 69e5d62d70ce467ac249bf5f91ffe819 302 PRINTS PR00344 Bacterial sensor protein C-terminal signature 252 270 8.0E-22 T 01-11-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 CDA09_07730 69e5d62d70ce467ac249bf5f91ffe819 302 SMART SM00387 184 292 1.2E-31 T 01-11-2018 IPR003594 Histidine kinase/HSP90-like ATPase CDA09_07730 69e5d62d70ce467ac249bf5f91ffe819 302 Gene3D G3DSA:1.10.287.130 17 139 1.4E-24 T 01-11-2018 CDA09_07730 69e5d62d70ce467ac249bf5f91ffe819 302 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 187 290 3.7E-22 T 01-11-2018 IPR003594 Histidine kinase/HSP90-like ATPase CDA09_17395 f4a9b5253d4d3d9b97323c11e0bbdf5b 351 Pfam PF01882 Protein of unknown function DUF58 240 315 3.8E-9 T 01-11-2018 IPR002881 Domain of unknown function DUF58 CDA09_00180 4d9ae752980f6f230abb3615e6514779 387 TIGRFAM TIGR03837 efp_adjacent_2: conserved hypothetical protein, PP_1857 family 12 382 2.7E-151 T 01-11-2018 IPR016633 Uncharacterised conserved protein UCP015557 CDA09_00180 4d9ae752980f6f230abb3615e6514779 387 PIRSF PIRSF015557 7 387 1.2E-155 T 01-11-2018 IPR016633 Uncharacterised conserved protein UCP015557 CDA09_00180 4d9ae752980f6f230abb3615e6514779 387 Pfam PF10093 Uncharacterized protein conserved in bacteria (DUF2331) 12 382 1.3E-149 T 01-11-2018 IPR016633 Uncharacterised conserved protein UCP015557 CDA09_04700 f9caf08de3b04ebb6471a99f3595b935 398 Gene3D G3DSA:3.90.1150.10 5 392 4.7E-156 T 01-11-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 CDA09_04700 f9caf08de3b04ebb6471a99f3595b935 398 SUPERFAMILY SSF53383 1 397 1.46E-121 T 01-11-2018 IPR015424 Pyridoxal phosphate-dependent transferase CDA09_04700 f9caf08de3b04ebb6471a99f3595b935 398 PRINTS PR00799 Aspartate aminotransferase signature 206 218 8.2E-37 T 01-11-2018 IPR000796 Aspartate/other aminotransferase GO:0006520|GO:0008483 KEGG: 00220+2.6.1.1|KEGG: 00250+2.6.1.1|KEGG: 00270+2.6.1.1|KEGG: 00330+2.6.1.1|KEGG: 00350+2.6.1.1|KEGG: 00360+2.6.1.1|KEGG: 00400+2.6.1.1|KEGG: 00401+2.6.1.1|KEGG: 00710+2.6.1.1|KEGG: 00950+2.6.1.1|KEGG: 00960+2.6.1.1|MetaCyc: PWY-5913|MetaCyc: PWY-6318|MetaCyc: PWY-6638|MetaCyc: PWY-6642|MetaCyc: PWY-6643|MetaCyc: PWY-7115|MetaCyc: PWY-7117|MetaCyc: PWY-7383 CDA09_04700 f9caf08de3b04ebb6471a99f3595b935 398 PRINTS PR00799 Aspartate aminotransferase signature 341 359 8.2E-37 T 01-11-2018 IPR000796 Aspartate/other aminotransferase GO:0006520|GO:0008483 KEGG: 00220+2.6.1.1|KEGG: 00250+2.6.1.1|KEGG: 00270+2.6.1.1|KEGG: 00330+2.6.1.1|KEGG: 00350+2.6.1.1|KEGG: 00360+2.6.1.1|KEGG: 00400+2.6.1.1|KEGG: 00401+2.6.1.1|KEGG: 00710+2.6.1.1|KEGG: 00950+2.6.1.1|KEGG: 00960+2.6.1.1|MetaCyc: PWY-5913|MetaCyc: PWY-6318|MetaCyc: PWY-6638|MetaCyc: PWY-6642|MetaCyc: PWY-6643|MetaCyc: PWY-7115|MetaCyc: PWY-7117|MetaCyc: PWY-7383 CDA09_04700 f9caf08de3b04ebb6471a99f3595b935 398 PRINTS PR00799 Aspartate aminotransferase signature 175 194 8.2E-37 T 01-11-2018 IPR000796 Aspartate/other aminotransferase GO:0006520|GO:0008483 KEGG: 00220+2.6.1.1|KEGG: 00250+2.6.1.1|KEGG: 00270+2.6.1.1|KEGG: 00330+2.6.1.1|KEGG: 00350+2.6.1.1|KEGG: 00360+2.6.1.1|KEGG: 00400+2.6.1.1|KEGG: 00401+2.6.1.1|KEGG: 00710+2.6.1.1|KEGG: 00950+2.6.1.1|KEGG: 00960+2.6.1.1|MetaCyc: PWY-5913|MetaCyc: PWY-6318|MetaCyc: PWY-6638|MetaCyc: PWY-6642|MetaCyc: PWY-6643|MetaCyc: PWY-7115|MetaCyc: PWY-7117|MetaCyc: PWY-7383 CDA09_04700 f9caf08de3b04ebb6471a99f3595b935 398 PRINTS PR00799 Aspartate aminotransferase signature 273 298 8.2E-37 T 01-11-2018 IPR000796 Aspartate/other aminotransferase GO:0006520|GO:0008483 KEGG: 00220+2.6.1.1|KEGG: 00250+2.6.1.1|KEGG: 00270+2.6.1.1|KEGG: 00330+2.6.1.1|KEGG: 00350+2.6.1.1|KEGG: 00360+2.6.1.1|KEGG: 00400+2.6.1.1|KEGG: 00401+2.6.1.1|KEGG: 00710+2.6.1.1|KEGG: 00950+2.6.1.1|KEGG: 00960+2.6.1.1|MetaCyc: PWY-5913|MetaCyc: PWY-6318|MetaCyc: PWY-6638|MetaCyc: PWY-6642|MetaCyc: PWY-6643|MetaCyc: PWY-7115|MetaCyc: PWY-7117|MetaCyc: PWY-7383 CDA09_04700 f9caf08de3b04ebb6471a99f3595b935 398 Gene3D G3DSA:3.40.640.10 60 300 4.7E-156 T 01-11-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 CDA09_04700 f9caf08de3b04ebb6471a99f3595b935 398 Pfam PF00155 Aminotransferase class I and II 27 391 2.4E-79 T 01-11-2018 IPR004839 Aminotransferase, class I/classII GO:0009058|GO:0030170 CDA09_12920 cf5dc22654c2744374300b8c7d0afcbb 216 SUPERFAMILY SSF52833 44 209 3.21E-36 T 01-11-2018 IPR036249 Thioredoxin-like superfamily CDA09_12920 cf5dc22654c2744374300b8c7d0afcbb 216 Gene3D G3DSA:3.40.30.10 25 215 1.6E-39 T 01-11-2018 CDA09_12920 cf5dc22654c2744374300b8c7d0afcbb 216 Pfam PF13462 Thioredoxin 49 209 5.3E-25 T 01-11-2018 IPR012336 Thioredoxin-like fold CDA09_12285 b3747972cc54c99457b20efc6542e2af 342 Pfam PF02492 CobW/HypB/UreG, nucleotide-binding domain 11 190 5.9E-51 T 01-11-2018 IPR003495 CobW/HypB/UreG, nucleotide-binding domain CDA09_12285 b3747972cc54c99457b20efc6542e2af 342 SUPERFAMILY SSF90002 246 339 2.22E-22 T 01-11-2018 CDA09_12285 b3747972cc54c99457b20efc6542e2af 342 Gene3D G3DSA:3.30.1220.10 230 339 3.3E-31 T 01-11-2018 IPR036627 CobW-like, C-terminal domain superfamily CDA09_12285 b3747972cc54c99457b20efc6542e2af 342 SMART SM00833 246 339 6.2E-12 T 01-11-2018 IPR011629 Cobalamin (vitamin B12) biosynthesis CobW-like, C-terminal CDA09_12285 b3747972cc54c99457b20efc6542e2af 342 Gene3D G3DSA:3.40.50.300 8 210 1.1E-68 T 01-11-2018 CDA09_12285 b3747972cc54c99457b20efc6542e2af 342 SUPERFAMILY SSF52540 9 189 4.87E-41 T 01-11-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CDA09_12285 b3747972cc54c99457b20efc6542e2af 342 Pfam PF07683 Cobalamin synthesis protein cobW C-terminal domain 247 339 8.0E-18 T 01-11-2018 IPR011629 Cobalamin (vitamin B12) biosynthesis CobW-like, C-terminal CDA09_22810 732dcf0eb39bf1df86f058cfcbc7ba97 375 PIRSF PIRSF000443 1 375 1.8E-137 T 01-11-2018 IPR008220 Homoserine/serine acetyltransferase MetX-like GO:0005737|GO:0009058|GO:0016747 CDA09_22810 732dcf0eb39bf1df86f058cfcbc7ba97 375 Gene3D G3DSA:3.40.50.1820 23 359 4.0E-137 T 01-11-2018 IPR029058 Alpha/Beta hydrolase fold CDA09_22810 732dcf0eb39bf1df86f058cfcbc7ba97 375 SUPERFAMILY SSF53474 12 372 6.37E-103 T 01-11-2018 IPR029058 Alpha/Beta hydrolase fold CDA09_22810 732dcf0eb39bf1df86f058cfcbc7ba97 375 Gene3D G3DSA:1.10.1740.110 184 289 4.0E-137 T 01-11-2018 CDA09_22810 732dcf0eb39bf1df86f058cfcbc7ba97 375 Pfam PF00561 alpha/beta hydrolase fold 48 358 3.2E-37 T 01-11-2018 IPR000073 Alpha/beta hydrolase fold-1 CDA09_22810 732dcf0eb39bf1df86f058cfcbc7ba97 375 TIGRFAM TIGR01392 homoserO_Ac_trn: homoserine O-acetyltransferase 19 369 3.5E-140 T 01-11-2018 IPR008220 Homoserine/serine acetyltransferase MetX-like GO:0005737|GO:0009058|GO:0016747 CDA09_22810 732dcf0eb39bf1df86f058cfcbc7ba97 375 Hamap MF_00296 Homoserine O-acetyltransferase [metXA]. 11 371 29.854 T 01-11-2018 IPR008220 Homoserine/serine acetyltransferase MetX-like GO:0005737|GO:0009058|GO:0016747 CDA09_20185 c7153342f9297031277779c3b92ea0d2 401 SMART SM01209 113 279 5.5E-4 T 01-11-2018 CDA09_20185 c7153342f9297031277779c3b92ea0d2 401 SUPERFAMILY SSF56059 93 315 1.34E-32 T 01-11-2018 CDA09_20185 c7153342f9297031277779c3b92ea0d2 401 Pfam PF13535 ATP-grasp domain 148 284 2.4E-6 T 01-11-2018 CDA09_20185 c7153342f9297031277779c3b92ea0d2 401 Gene3D G3DSA:3.30.470.20 108 400 2.6E-44 T 01-11-2018 CDA09_11355 85c88bb5d0c5be37dbb12511b3e77f69 193 Gene3D G3DSA:1.20.58.290 61 174 1.1E-56 T 01-11-2018 CDA09_11355 85c88bb5d0c5be37dbb12511b3e77f69 193 Gene3D G3DSA:2.30.110.10 1 125 1.1E-56 T 01-11-2018 IPR012349 FMN-binding split barrel GO:0048037 CDA09_11355 85c88bb5d0c5be37dbb12511b3e77f69 193 Pfam PF04289 Protein of unknown function (DUF447) 4 176 9.6E-48 T 01-11-2018 IPR007386 Protein of unknown function DUF447 CDA09_11355 85c88bb5d0c5be37dbb12511b3e77f69 193 SUPERFAMILY SSF50475 1 178 2.36E-52 T 01-11-2018 CDA09_18195 d6672e724a9b2ff7e3a41082ec400cf8 465 Pfam PF08245 Mur ligase middle domain 119 300 5.2E-30 T 01-11-2018 IPR013221 Mur ligase, central GO:0005524|GO:0009058 CDA09_18195 d6672e724a9b2ff7e3a41082ec400cf8 465 SUPERFAMILY SSF53623 112 317 1.01E-48 T 01-11-2018 IPR036565 Mur-like, catalytic domain superfamily GO:0005524|GO:0009058 Reactome: R-HSA-196757 CDA09_18195 d6672e724a9b2ff7e3a41082ec400cf8 465 SUPERFAMILY SSF53244 319 457 7.14E-42 T 01-11-2018 IPR036615 Mur ligase, C-terminal domain superfamily GO:0005524|GO:0009058|GO:0016874 Reactome: R-HSA-196757 CDA09_18195 d6672e724a9b2ff7e3a41082ec400cf8 465 Hamap MF_00639 UDP-N-acetylmuramoylalanine--D-glutamate ligase [murD]. 7 459 32.291 T 01-11-2018 IPR005762 UDP-N-acetylmuramoylalanine-D-glutamate ligase GO:0005524|GO:0005737|GO:0008360|GO:0008764|GO:0051301 KEGG: 00471+6.3.2.9|KEGG: 00550+6.3.2.9|MetaCyc: PWY-6386|MetaCyc: PWY-6387 CDA09_18195 d6672e724a9b2ff7e3a41082ec400cf8 465 Gene3D G3DSA:3.40.1190.10 97 319 1.3E-57 T 01-11-2018 IPR036565 Mur-like, catalytic domain superfamily GO:0005524|GO:0009058 Reactome: R-HSA-196757 CDA09_18195 d6672e724a9b2ff7e3a41082ec400cf8 465 SUPERFAMILY SSF51984 5 97 2.09E-16 T 01-11-2018 CDA09_18195 d6672e724a9b2ff7e3a41082ec400cf8 465 TIGRFAM TIGR01087 murD: UDP-N-acetylmuramoylalanine--D-glutamate ligase 9 456 3.5E-116 T 01-11-2018 IPR005762 UDP-N-acetylmuramoylalanine-D-glutamate ligase GO:0005524|GO:0005737|GO:0008360|GO:0008764|GO:0051301 KEGG: 00471+6.3.2.9|KEGG: 00550+6.3.2.9|MetaCyc: PWY-6386|MetaCyc: PWY-6387 CDA09_18195 d6672e724a9b2ff7e3a41082ec400cf8 465 Gene3D G3DSA:3.40.50.720 4 96 1.1E-22 T 01-11-2018 CDA09_18195 d6672e724a9b2ff7e3a41082ec400cf8 465 Gene3D G3DSA:3.90.190.20 327 462 3.6E-41 T 01-11-2018 IPR036615 Mur ligase, C-terminal domain superfamily GO:0005524|GO:0009058|GO:0016874 Reactome: R-HSA-196757 CDA09_06280 695202e6b25579fb54665e4b815d067c 434 Gene3D G3DSA:1.10.287.130 163 277 8.9E-22 T 01-11-2018 CDA09_06280 695202e6b25579fb54665e4b815d067c 434 Pfam PF00512 His Kinase A (phospho-acceptor) domain 214 278 3.4E-13 T 01-11-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 CDA09_06280 695202e6b25579fb54665e4b815d067c 434 SMART SM00387 325 434 1.2E-27 T 01-11-2018 IPR003594 Histidine kinase/HSP90-like ATPase CDA09_06280 695202e6b25579fb54665e4b815d067c 434 SMART SM00388 213 278 2.4E-14 T 01-11-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 CDA09_06280 695202e6b25579fb54665e4b815d067c 434 Gene3D G3DSA:3.30.565.10 279 430 4.5E-31 T 01-11-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily CDA09_06280 695202e6b25579fb54665e4b815d067c 434 SUPERFAMILY SSF47384 196 278 2.55E-16 T 01-11-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 CDA09_06280 695202e6b25579fb54665e4b815d067c 434 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 327 425 3.0E-16 T 01-11-2018 IPR003594 Histidine kinase/HSP90-like ATPase CDA09_06280 695202e6b25579fb54665e4b815d067c 434 PRINTS PR00344 Bacterial sensor protein C-terminal signature 362 376 1.9E-6 T 01-11-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 CDA09_06280 695202e6b25579fb54665e4b815d067c 434 PRINTS PR00344 Bacterial sensor protein C-terminal signature 394 412 1.9E-6 T 01-11-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 CDA09_06280 695202e6b25579fb54665e4b815d067c 434 SUPERFAMILY SSF55874 268 429 2.75E-31 T 01-11-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily CDA09_10285 fc5dc2bedca14e069d5c9a6217e29d43 590 Gene3D G3DSA:3.30.1120.10 474 554 3.7E-25 T 01-11-2018 CDA09_10285 fc5dc2bedca14e069d5c9a6217e29d43 590 SUPERFAMILY SSF53649 32 548 3.2E-149 T 01-11-2018 IPR017850 Alkaline-phosphatase-like, core domain superfamily GO:0003824 CDA09_10285 fc5dc2bedca14e069d5c9a6217e29d43 590 ProSitePatterns PS00149 Sulfatases signature 2. 134 144 - T 01-11-2018 IPR024607 Sulfatase, conserved site CDA09_10285 fc5dc2bedca14e069d5c9a6217e29d43 590 Gene3D G3DSA:3.40.720.10 31 471 6.1E-139 T 01-11-2018 IPR017849 Alkaline phosphatase-like, alpha/beta/alpha GO:0003824 CDA09_10285 fc5dc2bedca14e069d5c9a6217e29d43 590 Pfam PF00884 Sulfatase 34 443 1.3E-80 T 01-11-2018 IPR000917 Sulfatase, N-terminal GO:0008484 CDA09_21145 8c764a77e2cfa4b96242bca1bd334765 313 Pfam PF13793 N-terminal domain of ribose phosphate pyrophosphokinase 5 121 1.1E-42 T 01-11-2018 IPR029099 Ribose-phosphate pyrophosphokinase, N-terminal domain KEGG: 00030+2.7.6.1|KEGG: 00230+2.7.6.1 CDA09_21145 8c764a77e2cfa4b96242bca1bd334765 313 SMART SM01400 5 121 3.4E-62 T 01-11-2018 CDA09_21145 8c764a77e2cfa4b96242bca1bd334765 313 Gene3D G3DSA:3.40.50.2020 148 289 4.3E-109 T 01-11-2018 CDA09_21145 8c764a77e2cfa4b96242bca1bd334765 313 SUPERFAMILY SSF53271 70 304 4.38E-52 T 01-11-2018 IPR029057 Phosphoribosyltransferase-like CDA09_21145 8c764a77e2cfa4b96242bca1bd334765 313 SUPERFAMILY SSF53271 11 103 1.02E-6 T 01-11-2018 IPR029057 Phosphoribosyltransferase-like CDA09_21145 8c764a77e2cfa4b96242bca1bd334765 313 Gene3D G3DSA:3.40.50.2020 8 303 4.3E-109 T 01-11-2018 CDA09_21145 8c764a77e2cfa4b96242bca1bd334765 313 Pfam PF14572 Phosphoribosyl synthetase-associated domain 206 312 8.1E-17 T 01-11-2018 IPR005946 Ribose-phosphate pyrophosphokinase GO:0000287|GO:0004749|GO:0009165 KEGG: 00030+2.7.6.1|KEGG: 00230+2.7.6.1 CDA09_21145 8c764a77e2cfa4b96242bca1bd334765 313 ProSitePatterns PS00114 Phosphoribosyl pyrophosphate synthase signature. 129 144 - T 01-11-2018 IPR000842 Phosphoribosyl pyrophosphate synthetase, conserved site GO:0000287|GO:0004749|GO:0009156|GO:0044249 KEGG: 00030+2.7.6.1|KEGG: 00230+2.7.6.1|Reactome: R-HSA-73843 CDA09_21145 8c764a77e2cfa4b96242bca1bd334765 313 TIGRFAM TIGR01251 ribP_PPkin: ribose-phosphate diphosphokinase 6 312 1.2E-106 T 01-11-2018 IPR005946 Ribose-phosphate pyrophosphokinase GO:0000287|GO:0004749|GO:0009165 KEGG: 00030+2.7.6.1|KEGG: 00230+2.7.6.1 CDA09_04305 69027ad843d63051f8c821cb0cd7c6da 212 SUPERFAMILY SSF52317 4 210 4.42E-54 T 01-11-2018 IPR029062 Class I glutamine amidotransferase-like CDA09_04305 69027ad843d63051f8c821cb0cd7c6da 212 Pfam PF00117 Glutamine amidotransferase class-I 6 207 3.7E-17 T 01-11-2018 IPR017926 Glutamine amidotransferase CDA09_04305 69027ad843d63051f8c821cb0cd7c6da 212 Gene3D G3DSA:3.40.50.880 1 211 3.8E-72 T 01-11-2018 IPR029062 Class I glutamine amidotransferase-like CDA09_04305 69027ad843d63051f8c821cb0cd7c6da 212 PIRSF PIRSF000495 2 212 4.9E-67 T 01-11-2018 IPR010139 Imidazole glycerol phosphate synthase, subunit H GO:0000105|GO:0005737|GO:0016763 CDA09_04305 69027ad843d63051f8c821cb0cd7c6da 212 TIGRFAM TIGR01855 IMP_synth_hisH: imidazole glycerol phosphate synthase, glutamine amidotransferase subunit 4 209 1.7E-62 T 01-11-2018 IPR010139 Imidazole glycerol phosphate synthase, subunit H GO:0000105|GO:0005737|GO:0016763 CDA09_04305 69027ad843d63051f8c821cb0cd7c6da 212 Hamap MF_00278 Imidazole glycerol phosphate synthase subunit HisH [hisH]. 3 210 35.678 T 01-11-2018 IPR010139 Imidazole glycerol phosphate synthase, subunit H GO:0000105|GO:0005737|GO:0016763 CDA09_01260 9b3dea351278351b56a8254cba6c467a 107 Hamap MF_02200 Chaperone NapD [napD]. 1 78 16.018 T 01-11-2018 IPR005623 Chaperone NapD, nitrate reductase assembly CDA09_01260 9b3dea351278351b56a8254cba6c467a 107 Gene3D G3DSA:3.30.70.920 1 71 3.9E-14 T 01-11-2018 CDA09_01260 9b3dea351278351b56a8254cba6c467a 107 Pfam PF03927 NapD protein 1 77 5.0E-23 T 01-11-2018 IPR005623 Chaperone NapD, nitrate reductase assembly CDA09_13155 13a1ea7a9090eb4c4494e468f8f10824 401 Pfam PF03454 MoeA C-terminal region (domain IV) 332 395 1.4E-10 T 01-11-2018 IPR005111 MoeA, C-terminal, domain IV GO:0032324 KEGG: 00790+2.10.1.1|MetaCyc: PWY-6823|Reactome: R-HSA-947581 CDA09_13155 13a1ea7a9090eb4c4494e468f8f10824 401 Gene3D G3DSA:2.40.340.10 326 390 1.3E-126 T 01-11-2018 IPR036688 MoeA, C-terminal, domain IV superfamily GO:0032324 KEGG: 00790+2.10.1.1|MetaCyc: PWY-6823|Reactome: R-HSA-947581 CDA09_13155 13a1ea7a9090eb4c4494e468f8f10824 401 SUPERFAMILY SSF63867 328 397 4.97E-13 T 01-11-2018 IPR036688 MoeA, C-terminal, domain IV superfamily GO:0032324 KEGG: 00790+2.10.1.1|MetaCyc: PWY-6823|Reactome: R-HSA-947581 CDA09_13155 13a1ea7a9090eb4c4494e468f8f10824 401 Gene3D G3DSA:2.170.190.11 49 140 1.3E-126 T 01-11-2018 CDA09_13155 13a1ea7a9090eb4c4494e468f8f10824 401 TIGRFAM TIGR00177 molyb_syn: molybdenum cofactor synthesis domain 176 312 7.8E-28 T 01-11-2018 IPR001453 MoaB/Mog domain CDA09_13155 13a1ea7a9090eb4c4494e468f8f10824 401 Gene3D G3DSA:3.90.105.10 30 173 1.3E-126 T 01-11-2018 CDA09_13155 13a1ea7a9090eb4c4494e468f8f10824 401 Pfam PF00994 Probable molybdopterin binding domain 180 314 8.4E-23 T 01-11-2018 IPR001453 MoaB/Mog domain CDA09_13155 13a1ea7a9090eb4c4494e468f8f10824 401 SMART SM00852 179 316 2.2E-44 T 01-11-2018 IPR001453 MoaB/Mog domain CDA09_13155 13a1ea7a9090eb4c4494e468f8f10824 401 SUPERFAMILY SSF63882 3 175 1.57E-51 T 01-11-2018 IPR036135 MoeA, N-terminal and linker domain superfamily GO:0032324 KEGG: 00790+2.10.1.1|MetaCyc: PWY-6823|Reactome: R-HSA-947581 CDA09_13155 13a1ea7a9090eb4c4494e468f8f10824 401 Gene3D G3DSA:3.40.980.10 174 325 1.3E-126 T 01-11-2018 IPR036425 MoaB/Mog-like domain superfamily CDA09_13155 13a1ea7a9090eb4c4494e468f8f10824 401 SUPERFAMILY SSF53218 176 319 1.31E-42 T 01-11-2018 IPR036425 MoaB/Mog-like domain superfamily CDA09_13155 13a1ea7a9090eb4c4494e468f8f10824 401 Pfam PF03453 MoeA N-terminal region (domain I and II) 7 166 7.4E-43 T 01-11-2018 IPR005110 MoeA, N-terminal and linker domain GO:0032324 KEGG: 00790+2.10.1.1|MetaCyc: PWY-6823|Reactome: R-HSA-947581 CDA09_07085 80b5e190112be85393d690277e765420 454 Gene3D G3DSA:2.30.42.10 221 309 2.2E-20 T 01-11-2018 CDA09_07085 80b5e190112be85393d690277e765420 454 SMART SM00228 196 280 0.11 T 01-11-2018 IPR001478 PDZ domain GO:0005515 CDA09_07085 80b5e190112be85393d690277e765420 454 SMART SM00228 115 187 1.1 T 01-11-2018 IPR001478 PDZ domain GO:0005515 CDA09_07085 80b5e190112be85393d690277e765420 454 Pfam PF02163 Peptidase family M50 10 438 7.8E-78 T 01-11-2018 IPR008915 Peptidase M50 GO:0004222|GO:0006508 Reactome: R-HSA-1655829|Reactome: R-HSA-381033|Reactome: R-HSA-8874211|Reactome: R-HSA-8963889 CDA09_07085 80b5e190112be85393d690277e765420 454 SUPERFAMILY SSF50156 197 290 4.47E-15 T 01-11-2018 IPR036034 PDZ superfamily GO:0005515 CDA09_07085 80b5e190112be85393d690277e765420 454 Gene3D G3DSA:2.30.42.10 127 220 3.3E-14 T 01-11-2018 CDA09_07085 80b5e190112be85393d690277e765420 454 SUPERFAMILY SSF50156 86 185 1.24E-8 T 01-11-2018 IPR036034 PDZ superfamily GO:0005515 CDA09_07085 80b5e190112be85393d690277e765420 454 TIGRFAM TIGR00054 TIGR00054: RIP metalloprotease RseP 11 452 8.7E-108 T 01-11-2018 IPR004387 Peptidase M50, putative membrane-associated zinc metallopeptidase GO:0004222|GO:0006508|GO:0016021 CDA09_07115 f8101b5f64016a1badf6e3a75e502310 391 SUPERFAMILY SSF53756 4 379 1.33E-31 T 01-11-2018 CDA09_07115 f8101b5f64016a1badf6e3a75e502310 391 Pfam PF02684 Lipid-A-disaccharide synthetase 5 373 8.4E-98 T 01-11-2018 IPR003835 Glycosyl transferase, family 19 GO:0008915|GO:0009245 KEGG: 00540+2.4.1.182 CDA09_07115 f8101b5f64016a1badf6e3a75e502310 391 TIGRFAM TIGR00215 lpxB: lipid-A-disaccharide synthase 4 375 4.2E-105 T 01-11-2018 IPR003835 Glycosyl transferase, family 19 GO:0008915|GO:0009245 KEGG: 00540+2.4.1.182 CDA09_07115 f8101b5f64016a1badf6e3a75e502310 391 Hamap MF_00392 Lipid-A-disaccharide synthase [lpxB]. 2 379 37.725 T 01-11-2018 IPR003835 Glycosyl transferase, family 19 GO:0008915|GO:0009245 KEGG: 00540+2.4.1.182 CDA09_05200 aa4665c2169d4de5ce506cecf86dc815 90 PIRSF PIRSF029827 1 90 2.0E-39 T 01-11-2018 IPR007457 Fe(II) trafficking protein YggX GO:0005506 CDA09_05200 aa4665c2169d4de5ce506cecf86dc815 90 Gene3D G3DSA:1.10.3880.10 1 90 1.0E-39 T 01-11-2018 IPR036766 Fe(II) trafficking protein YggX superfamily GO:0005506 CDA09_05200 aa4665c2169d4de5ce506cecf86dc815 90 Pfam PF04362 Bacterial Fe(2+) trafficking 1 88 5.1E-43 T 01-11-2018 IPR007457 Fe(II) trafficking protein YggX GO:0005506 CDA09_05200 aa4665c2169d4de5ce506cecf86dc815 90 Hamap MF_00686 Probable Fe(2+)-trafficking protein [yggX]. 1 88 28.267 T 01-11-2018 IPR007457 Fe(II) trafficking protein YggX GO:0005506 CDA09_05200 aa4665c2169d4de5ce506cecf86dc815 90 SUPERFAMILY SSF111148 1 89 6.67E-40 T 01-11-2018 IPR036766 Fe(II) trafficking protein YggX superfamily GO:0005506 CDA09_05200 aa4665c2169d4de5ce506cecf86dc815 90 ProDom PD029191 TRAFFICKING IRON PROBABLE FE2 YGGX FEII 3D-STRUCTURE OXIDATIVE CONTROL DIRECT 1 75 4.0E-32 T 01-11-2018 IPR007457 Fe(II) trafficking protein YggX GO:0005506 CDA09_21280 9303126af6bd13749c7a452d01f32dc3 318 TIGRFAM TIGR01380 glut_syn: glutathione synthase 5 315 9.9E-119 T 01-11-2018 IPR006284 Glutathione synthetase, prokaryotic GO:0004363|GO:0005829|GO:0006750 KEGG: 00270+6.3.2.3|KEGG: 00480+6.3.2.3 CDA09_21280 9303126af6bd13749c7a452d01f32dc3 318 Gene3D G3DSA:3.30.1490.20 140 204 5.5E-104 T 01-11-2018 IPR013815 ATP-grasp fold, subdomain 1 GO:0005524 CDA09_21280 9303126af6bd13749c7a452d01f32dc3 318 Pfam PF02955 Prokaryotic glutathione synthetase, ATP-grasp domain 127 299 7.9E-69 T 01-11-2018 IPR004218 Prokaryotic glutathione synthetase, ATP-binding GO:0004363|GO:0005524|GO:0006750 KEGG: 00270+6.3.2.3|KEGG: 00480+6.3.2.3 CDA09_21280 9303126af6bd13749c7a452d01f32dc3 318 Gene3D G3DSA:3.40.50.20 10 117 5.5E-104 T 01-11-2018 CDA09_21280 9303126af6bd13749c7a452d01f32dc3 318 SUPERFAMILY SSF56059 127 314 3.98E-56 T 01-11-2018 CDA09_21280 9303126af6bd13749c7a452d01f32dc3 318 SUPERFAMILY SSF52440 5 125 1.7E-39 T 01-11-2018 IPR016185 Pre-ATP-grasp domain superfamily CDA09_21280 9303126af6bd13749c7a452d01f32dc3 318 Hamap MF_00162 Glutathione synthetase [gshB]. 1 318 147.828 T 01-11-2018 IPR006284 Glutathione synthetase, prokaryotic GO:0004363|GO:0005829|GO:0006750 KEGG: 00270+6.3.2.3|KEGG: 00480+6.3.2.3 CDA09_21280 9303126af6bd13749c7a452d01f32dc3 318 Gene3D G3DSA:3.30.470.20 118 297 5.5E-104 T 01-11-2018 CDA09_21280 9303126af6bd13749c7a452d01f32dc3 318 Pfam PF02951 Prokaryotic glutathione synthetase, N-terminal domain 5 123 1.4E-41 T 01-11-2018 IPR004215 Prokaryotic glutathione synthetase, N-terminal GO:0004363|GO:0006750 KEGG: 00270+6.3.2.3|KEGG: 00480+6.3.2.3 CDA09_06575 9b9b525e29ba4fedf117fdbf153a0645 302 Gene3D G3DSA:3.40.190.10 135 230 2.9E-99 T 01-11-2018 CDA09_06575 9b9b525e29ba4fedf117fdbf153a0645 302 SMART SM00062 41 273 5.1E-55 T 01-11-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF CDA09_06575 9b9b525e29ba4fedf117fdbf153a0645 302 Pfam PF00497 Bacterial extracellular solute-binding proteins, family 3 42 271 3.9E-47 T 01-11-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF CDA09_06575 9b9b525e29ba4fedf117fdbf153a0645 302 Gene3D G3DSA:3.40.190.10 30 276 2.9E-99 T 01-11-2018 CDA09_06575 9b9b525e29ba4fedf117fdbf153a0645 302 SUPERFAMILY SSF53850 14 271 1.03E-62 T 01-11-2018 CDA09_05110 1b667e52b84d3643df7f610317b4260d 230 Pfam PF13488 Glycine zipper 33 80 7.3E-12 T 01-11-2018 IPR039567 Glycine zipper domain CDA09_05110 1b667e52b84d3643df7f610317b4260d 230 ProSitePatterns PS01068 OmpA-like domain. 143 187 - T 01-11-2018 IPR006690 Outer membrane protein, OmpA-like, conserved site GO:0009279|GO:0016021 CDA09_05110 1b667e52b84d3643df7f610317b4260d 230 SUPERFAMILY SSF103088 98 213 1.09E-40 T 01-11-2018 IPR036737 OmpA-like domain superfamily CDA09_05110 1b667e52b84d3643df7f610317b4260d 230 Pfam PF00691 OmpA family 110 205 6.1E-25 T 01-11-2018 IPR006665 OmpA-like domain CDA09_05110 1b667e52b84d3643df7f610317b4260d 230 Gene3D G3DSA:3.30.1330.60 74 218 4.3E-52 T 01-11-2018 IPR036737 OmpA-like domain superfamily CDA09_05110 1b667e52b84d3643df7f610317b4260d 230 PRINTS PR01021 OMPA domain signature 156 172 4.8E-14 T 01-11-2018 IPR006664 Outer membrane protein, bacterial GO:0009279|GO:0016021 CDA09_05110 1b667e52b84d3643df7f610317b4260d 230 PRINTS PR01021 OMPA domain signature 111 133 4.8E-14 T 01-11-2018 IPR006664 Outer membrane protein, bacterial GO:0009279|GO:0016021 CDA09_05110 1b667e52b84d3643df7f610317b4260d 230 PRINTS PR01021 OMPA domain signature 141 156 4.8E-14 T 01-11-2018 IPR006664 Outer membrane protein, bacterial GO:0009279|GO:0016021 CDA09_04095 fdfb82abe6021ae239e98e35f5f96b0d 300 PIRSF PIRSF003097 3 297 1.6E-61 T 01-11-2018 IPR004513 Cell division protein FtsX GO:0016021 CDA09_00405 6277ecaff07a52493385546121cd500b 298 SMART SM00062 37 269 3.9E-54 T 01-11-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF CDA09_00405 6277ecaff07a52493385546121cd500b 298 SUPERFAMILY SSF53850 1 270 3.17E-64 T 01-11-2018 CDA09_00405 6277ecaff07a52493385546121cd500b 298 SMART SM00079 37 268 0.0045 T 01-11-2018 IPR001320 Ionotropic glutamate receptor GO:0004970|GO:0016020 CDA09_00405 6277ecaff07a52493385546121cd500b 298 Gene3D G3DSA:3.40.190.10 131 226 4.3E-100 T 01-11-2018 CDA09_00405 6277ecaff07a52493385546121cd500b 298 Gene3D G3DSA:3.40.190.10 27 272 4.3E-100 T 01-11-2018 CDA09_00405 6277ecaff07a52493385546121cd500b 298 Pfam PF00497 Bacterial extracellular solute-binding proteins, family 3 38 266 1.8E-49 T 01-11-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF CDA09_02820 fab7d18f882fab8059db6ae705d8c4f0 117 TIGRFAM TIGR04418 PriB_gamma: primosomal replication protein PriB 7 100 2.5E-29 T 01-11-2018 IPR023646 Primosomal replication protein PriB GO:0003697|GO:0006260|GO:0030894 CDA09_02820 fab7d18f882fab8059db6ae705d8c4f0 117 Gene3D G3DSA:2.40.50.140 6 116 1.3E-30 T 01-11-2018 CDA09_02820 fab7d18f882fab8059db6ae705d8c4f0 117 SUPERFAMILY SSF50249 7 106 1.43E-18 T 01-11-2018 IPR012340 Nucleic acid-binding, OB-fold CDA09_02820 fab7d18f882fab8059db6ae705d8c4f0 117 Hamap MF_00720 Primosomal replication protein N [priB]. 6 101 22.759 T 01-11-2018 IPR023646 Primosomal replication protein PriB GO:0003697|GO:0006260|GO:0030894 CDA09_02820 fab7d18f882fab8059db6ae705d8c4f0 117 PIRSF PIRSF003135 2 102 5.2E-16 T 01-11-2018 IPR023646 Primosomal replication protein PriB GO:0003697|GO:0006260|GO:0030894 CDA09_16330 fe9f49f5e4610882cd6a5b0866e83224 342 Gene3D G3DSA:3.30.390.60 128 228 1.1E-44 T 01-11-2018 IPR023120 Winged helix-turn-helix transcription repressor, HrcA, inserted dimerising domain superfamily CDA09_16330 fe9f49f5e4610882cd6a5b0866e83224 342 Pfam PF03444 Winged helix-turn-helix transcription repressor, HrcA DNA-binding 11 74 1.5E-4 T 01-11-2018 IPR005104 Winged helix-turn-helix transcription repressor, HrcA DNA-binding domain GO:0003677|GO:0006355 CDA09_16330 fe9f49f5e4610882cd6a5b0866e83224 342 TIGRFAM TIGR00331 hrcA: heat-inducible transcription repressor HrcA 5 337 2.9E-100 T 01-11-2018 IPR002571 Heat-inducible transcription repressor HrcA GO:0003677|GO:0006355 CDA09_16330 fe9f49f5e4610882cd6a5b0866e83224 342 Gene3D G3DSA:1.10.10.10 1 86 3.0E-31 T 01-11-2018 IPR036388 Winged helix-like DNA-binding domain superfamily CDA09_16330 fe9f49f5e4610882cd6a5b0866e83224 342 SUPERFAMILY SSF55781 73 340 3.33E-63 T 01-11-2018 CDA09_16330 fe9f49f5e4610882cd6a5b0866e83224 342 PIRSF PIRSF005485 1 342 1.0E-113 T 01-11-2018 IPR002571 Heat-inducible transcription repressor HrcA GO:0003677|GO:0006355 CDA09_16330 fe9f49f5e4610882cd6a5b0866e83224 342 SUPERFAMILY SSF46785 4 86 1.19E-22 T 01-11-2018 IPR036390 Winged helix DNA-binding domain superfamily CDA09_16330 fe9f49f5e4610882cd6a5b0866e83224 342 Hamap MF_00081 Heat-inducible transcription repressor HrcA [hrcA]. 3 331 27.947 T 01-11-2018 IPR002571 Heat-inducible transcription repressor HrcA GO:0003677|GO:0006355 CDA09_16330 fe9f49f5e4610882cd6a5b0866e83224 342 Gene3D G3DSA:3.30.450.40 105 337 1.1E-44 T 01-11-2018 IPR029016 GAF-like domain superfamily CDA09_16330 fe9f49f5e4610882cd6a5b0866e83224 342 Pfam PF01628 HrcA protein C terminal domain 105 324 4.0E-62 T 01-11-2018 IPR021153 Heat-inducible transcription repressor HrcA, C-terminal GO:0003677|GO:0006355 CDA09_05850 1190493061c39671fce9522d678163b1 272 SUPERFAMILY SSF52540 7 241 1.3E-69 T 01-11-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CDA09_05850 1190493061c39671fce9522d678163b1 272 Pfam PF00005 ABC transporter 26 166 8.1E-30 T 01-11-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 CDA09_05850 1190493061c39671fce9522d678163b1 272 Gene3D G3DSA:3.40.50.300 5 232 2.2E-63 T 01-11-2018 CDA09_05850 1190493061c39671fce9522d678163b1 272 SMART SM00382 35 229 5.0E-16 T 01-11-2018 IPR003593 AAA+ ATPase domain CDA09_05850 1190493061c39671fce9522d678163b1 272 ProSitePatterns PS00211 ABC transporters family signature. 139 153 - T 01-11-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 CDA09_22355 648e65395b151c8a5e1b8fa3074bc55f 113 Pfam PF11985 Protein of unknown function (DUF3486) 1 63 5.1E-12 T 01-11-2018 IPR021874 Bacteriophage Mu, Gp27 CDA09_20665 11c292d1c2454e39adebf0c3618593c9 224 Pfam PF01618 MotA/TolQ/ExbB proton channel family 81 209 3.0E-41 T 01-11-2018 IPR002898 MotA/TolQ/ExbB proton channel CDA09_20665 11c292d1c2454e39adebf0c3618593c9 224 Hamap MF_02202 Tol-Pal system protein TolQ [tolQ]. 7 224 40.519 T 01-11-2018 IPR014163 Tol-Pal system, TolQ GO:0016021|GO:0043213 CDA09_20665 11c292d1c2454e39adebf0c3618593c9 224 TIGRFAM TIGR02796 tolQ: protein TolQ 8 221 2.2E-86 T 01-11-2018 IPR014163 Tol-Pal system, TolQ GO:0016021|GO:0043213 CDA09_09830 d99fcb2ce1a83bc6a2a4128a59416cab 796 Pfam PF04055 Radical SAM superfamily 471 645 4.9E-16 T 01-11-2018 IPR007197 Radical SAM GO:0003824|GO:0051536 CDA09_09830 d99fcb2ce1a83bc6a2a4128a59416cab 796 SUPERFAMILY SSF102114 25 352 6.15E-37 T 01-11-2018 CDA09_09830 d99fcb2ce1a83bc6a2a4128a59416cab 796 Gene3D G3DSA:3.20.20.70 1 330 2.1E-53 T 01-11-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 CDA09_09830 d99fcb2ce1a83bc6a2a4128a59416cab 796 Hamap MF_01612 FO synthase subunit 2 [cofH]. 415 778 47.355 T 01-11-2018 IPR019940 CofH family GO:0016765 KEGG: 00680+2.5.1.77 CDA09_09830 d99fcb2ce1a83bc6a2a4128a59416cab 796 TIGRFAM TIGR00423 TIGR00423: radical SAM domain protein, CofH subfamily 463 775 2.4E-108 T 01-11-2018 IPR020050 FO synthase, subunit 2 GO:0016765 KEGG: 00680+2.5.1.77 CDA09_09830 d99fcb2ce1a83bc6a2a4128a59416cab 796 Pfam PF04055 Radical SAM superfamily 59 232 1.6E-8 T 01-11-2018 IPR007197 Radical SAM GO:0003824|GO:0051536 CDA09_09830 d99fcb2ce1a83bc6a2a4128a59416cab 796 SMART SM00729 467 695 1.3E-4 T 01-11-2018 IPR006638 Elp3/MiaB/NifB GO:0003824|GO:0051536 CDA09_09830 d99fcb2ce1a83bc6a2a4128a59416cab 796 SMART SM00729 55 282 4.8E-7 T 01-11-2018 IPR006638 Elp3/MiaB/NifB GO:0003824|GO:0051536 CDA09_09830 d99fcb2ce1a83bc6a2a4128a59416cab 796 SUPERFAMILY SSF102114 427 741 8.89E-53 T 01-11-2018 CDA09_09830 d99fcb2ce1a83bc6a2a4128a59416cab 796 Gene3D G3DSA:3.20.20.70 412 744 7.9E-60 T 01-11-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 CDA09_09830 d99fcb2ce1a83bc6a2a4128a59416cab 796 TIGRFAM TIGR03551 F420_cofH: 7,8-didemethyl-8-hydroxy-5-deazariboflavin synthase, CofH subunit 429 776 5.4E-145 T 01-11-2018 IPR019940 CofH family GO:0016765 KEGG: 00680+2.5.1.77 CDA09_09830 d99fcb2ce1a83bc6a2a4128a59416cab 796 Hamap MF_01611 FO synthase subunit 1 [cofG]. 51 377 44.361 T 01-11-2018 IPR019939 CofG family GO:0009108|GO:0016765|GO:0051539 KEGG: 00680+2.5.1.77 CDA09_09830 d99fcb2ce1a83bc6a2a4128a59416cab 796 TIGRFAM TIGR03550 F420_cofG: 7,8-didemethyl-8-hydroxy-5-deazariboflavin synthase, CofG subunit 53 375 4.2E-128 T 01-11-2018 IPR019939 CofG family GO:0009108|GO:0016765|GO:0051539 KEGG: 00680+2.5.1.77 CDA09_12505 54a98aa44536fe3e847b822b1ee13e0a 674 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 621 635 9.5E-8 T 01-11-2018 CDA09_12505 54a98aa44536fe3e847b822b1ee13e0a 674 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 490 499 9.5E-8 T 01-11-2018 CDA09_12505 54a98aa44536fe3e847b822b1ee13e0a 674 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 380 402 9.5E-8 T 01-11-2018 CDA09_12505 54a98aa44536fe3e847b822b1ee13e0a 674 Gene3D G3DSA:3.50.50.60 474 627 2.7E-111 T 01-11-2018 IPR036188 FAD/NAD(P)-binding domain superfamily CDA09_12505 54a98aa44536fe3e847b822b1ee13e0a 674 Gene3D G3DSA:3.20.20.70 6 372 1.6E-126 T 01-11-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 CDA09_12505 54a98aa44536fe3e847b822b1ee13e0a 674 Pfam PF00724 NADH:flavin oxidoreductase / NADH oxidase family 9 334 7.1E-89 T 01-11-2018 IPR001155 NADH:flavin oxidoreductase/NADH oxidase, N-terminal GO:0010181|GO:0016491|GO:0055114 CDA09_12505 54a98aa44536fe3e847b822b1ee13e0a 674 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 381 400 4.2E-11 T 01-11-2018 CDA09_12505 54a98aa44536fe3e847b822b1ee13e0a 674 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 620 636 4.2E-11 T 01-11-2018 CDA09_12505 54a98aa44536fe3e847b822b1ee13e0a 674 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 502 520 4.2E-11 T 01-11-2018 CDA09_12505 54a98aa44536fe3e847b822b1ee13e0a 674 SUPERFAMILY SSF51395 6 370 3.91E-115 T 01-11-2018 CDA09_12505 54a98aa44536fe3e847b822b1ee13e0a 674 SUPERFAMILY SSF51905 378 608 7.9E-43 T 01-11-2018 IPR036188 FAD/NAD(P)-binding domain superfamily CDA09_12505 54a98aa44536fe3e847b822b1ee13e0a 674 Gene3D G3DSA:3.40.50.720 379 667 2.7E-111 T 01-11-2018 CDA09_12505 54a98aa44536fe3e847b822b1ee13e0a 674 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 379 651 2.4E-24 T 01-11-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 CDA09_21440 4db68e4d0fefe9cff5573bd438415b5e 260 SUPERFAMILY SSF56529 1 260 4.58E-78 T 01-11-2018 IPR036663 Fumarylacetoacetase-like, C-terminal domain superfamily GO:0003824 CDA09_21440 4db68e4d0fefe9cff5573bd438415b5e 260 Gene3D G3DSA:3.90.850.10 1 260 1.3E-80 T 01-11-2018 IPR036663 Fumarylacetoacetase-like, C-terminal domain superfamily GO:0003824 CDA09_21440 4db68e4d0fefe9cff5573bd438415b5e 260 TIGRFAM TIGR03220 catechol_dmpE: 2-oxopent-4-enoate hydratase 6 259 1.2E-132 T 01-11-2018 IPR017632 2-oxopent-4-enoate hydratase CDA09_21440 4db68e4d0fefe9cff5573bd438415b5e 260 Pfam PF01557 Fumarylacetoacetate (FAA) hydrolase family 91 256 1.1E-10 T 01-11-2018 IPR011234 Fumarylacetoacetase-like, C-terminal GO:0003824 CDA09_09940 e28ea3a8f616172e46817e8472567f29 400 Pfam PF04303 PrpF protein 7 392 6.3E-145 T 01-11-2018 IPR007400 PrpF protein CDA09_09940 e28ea3a8f616172e46817e8472567f29 400 TIGRFAM TIGR02334 prpF: probable AcnD-accessory protein PrpF 7 394 4.4E-169 T 01-11-2018 IPR012709 2-methyl-aconitate isomerase PrpF GO:0016853|GO:0019629 CDA09_09940 e28ea3a8f616172e46817e8472567f29 400 SUPERFAMILY SSF54506 188 394 1.1E-67 T 01-11-2018 CDA09_09940 e28ea3a8f616172e46817e8472567f29 400 SUPERFAMILY SSF54506 6 180 1.18E-64 T 01-11-2018 CDA09_09940 e28ea3a8f616172e46817e8472567f29 400 Gene3D G3DSA:3.10.310.10 179 375 5.1E-139 T 01-11-2018 CDA09_09940 e28ea3a8f616172e46817e8472567f29 400 Gene3D G3DSA:3.10.310.10 12 389 5.1E-139 T 01-11-2018 CDA09_07790 dfccc22f8bae33aceeed1503157c4fea 259 Gene3D G3DSA:3.40.50.720 50 243 2.8E-47 T 01-11-2018 CDA09_07790 dfccc22f8bae33aceeed1503157c4fea 259 SUPERFAMILY SSF51735 51 243 2.7E-33 T 01-11-2018 IPR036291 NAD(P)-binding domain superfamily CDA09_07790 dfccc22f8bae33aceeed1503157c4fea 259 Pfam PF03807 NADP oxidoreductase coenzyme F420-dependent 51 142 3.4E-18 T 01-11-2018 IPR028939 Pyrroline-5-carboxylate reductase, catalytic, N-terminal CDA09_17850 91d5fc41049bc04093282374db4da42b 176 SUPERFAMILY SSF140804 38 162 1.7E-31 T 01-11-2018 IPR027405 YidB-like CDA09_17850 91d5fc41049bc04093282374db4da42b 176 Pfam PF06078 Bacterial protein of unknown function (DUF937) 41 153 2.6E-13 T 01-11-2018 IPR009282 Protein of unknown function DUF937 CDA09_17850 91d5fc41049bc04093282374db4da42b 176 Gene3D G3DSA:1.10.10.690 32 175 7.5E-37 T 01-11-2018 IPR027405 YidB-like CDA09_20870 06f58d858313df5bd9db1f48e2cf9220 205 Gene3D G3DSA:3.40.50.10420 18 204 2.3E-40 T 01-11-2018 IPR024185 5-formyltetrahydrofolate cyclo-ligase-like domain superfamily CDA09_20870 06f58d858313df5bd9db1f48e2cf9220 205 Pfam PF01812 5-formyltetrahydrofolate cyclo-ligase family 20 193 3.5E-22 T 01-11-2018 IPR002698 5-formyltetrahydrofolate cyclo-ligase CDA09_20870 06f58d858313df5bd9db1f48e2cf9220 205 PIRSF PIRSF006806 15 196 1.1E-24 T 01-11-2018 IPR002698 5-formyltetrahydrofolate cyclo-ligase CDA09_20870 06f58d858313df5bd9db1f48e2cf9220 205 TIGRFAM TIGR02727 MTHFS_bact: 5-formyltetrahydrofolate cyclo-ligase 20 193 1.2E-37 T 01-11-2018 IPR002698 5-formyltetrahydrofolate cyclo-ligase CDA09_20870 06f58d858313df5bd9db1f48e2cf9220 205 SUPERFAMILY SSF100950 18 199 1.03E-44 T 01-11-2018 IPR037171 NagB/RpiA transferase-like CDA09_18535 8ddb6b9575218d982aca71ce2f693b11 157 TIGRFAM TIGR00040 yfcE: phosphodiesterase, MJ0936 family 2 145 4.3E-23 T 01-11-2018 IPR000979 Phosphodiesterase MJ0936/Vps29 Reactome: R-HSA-3238698 CDA09_18535 8ddb6b9575218d982aca71ce2f693b11 157 Gene3D G3DSA:3.60.21.10 1 150 2.0E-27 T 01-11-2018 IPR029052 Metallo-dependent phosphatase-like CDA09_18535 8ddb6b9575218d982aca71ce2f693b11 157 SUPERFAMILY SSF56300 1 152 3.52E-34 T 01-11-2018 CDA09_18535 8ddb6b9575218d982aca71ce2f693b11 157 Pfam PF12850 Calcineurin-like phosphoesterase superfamily domain 3 136 1.3E-29 T 01-11-2018 IPR024654 Calcineurin-like phosphoesterase domain, lpxH type Reactome: R-HSA-3238698 CDA09_00150 e36e5289f17e140a65c919ebe63a6fc4 395 SUPERFAMILY SSF56645 8 239 2.49E-77 T 01-11-2018 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain superfamily GO:0016627|GO:0055114 CDA09_00150 e36e5289f17e140a65c919ebe63a6fc4 395 Pfam PF02771 Acyl-CoA dehydrogenase, N-terminal domain 21 133 2.6E-35 T 01-11-2018 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal GO:0016627|GO:0050660|GO:0055114 CDA09_00150 e36e5289f17e140a65c919ebe63a6fc4 395 Gene3D G3DSA:1.20.140.10 242 395 2.0E-42 T 01-11-2018 CDA09_00150 e36e5289f17e140a65c919ebe63a6fc4 395 Gene3D G3DSA:2.40.110.10 136 240 7.0E-37 T 01-11-2018 CDA09_00150 e36e5289f17e140a65c919ebe63a6fc4 395 Gene3D G3DSA:1.10.540.10 3 135 1.0E-43 T 01-11-2018 IPR037069 Acyl-CoA dehydrogenase/oxidase, N-terminal domain superfamily GO:0016627|GO:0050660|GO:0055114 CDA09_00150 e36e5289f17e140a65c919ebe63a6fc4 395 SUPERFAMILY SSF47203 240 389 6.77E-43 T 01-11-2018 IPR036250 Acyl-CoA dehydrogenase-like, C-terminal GO:0016627|GO:0055114 CDA09_00150 e36e5289f17e140a65c919ebe63a6fc4 395 Pfam PF00441 Acyl-CoA dehydrogenase, C-terminal domain 241 387 2.6E-28 T 01-11-2018 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal GO:0016627|GO:0055114 CDA09_00150 e36e5289f17e140a65c919ebe63a6fc4 395 Pfam PF02770 Acyl-CoA dehydrogenase, middle domain 137 228 6.2E-21 T 01-11-2018 IPR006091 Acyl-CoA oxidase/dehydrogenase, central domain GO:0016627|GO:0055114 CDA09_00150 e36e5289f17e140a65c919ebe63a6fc4 395 ProSitePatterns PS00073 Acyl-CoA dehydrogenases signature 2. 346 365 - T 01-11-2018 IPR006089 Acyl-CoA dehydrogenase, conserved site GO:0003995|GO:0055114 CDA09_15645 6f654c3c94c9174b6b7735ea3fc84253 107 Pfam PF02694 Uncharacterised BCR, YnfA/UPF0060 family 1 106 6.8E-39 T 01-11-2018 IPR003844 Uncharacterised protein family UPF0060 GO:0016020 CDA09_15645 6f654c3c94c9174b6b7735ea3fc84253 107 Hamap MF_00010 UPF0060 membrane protein YnfA [ynfA]. 1 105 24.931 T 01-11-2018 IPR003844 Uncharacterised protein family UPF0060 GO:0016020 CDA09_15645 6f654c3c94c9174b6b7735ea3fc84253 107 SUPERFAMILY SSF103481 7 105 4.58E-7 T 01-11-2018 CDA09_15415 a54970a452dc8c9c2ce0e11b7d2f6efb 121 Pfam PF07238 PilZ domain 17 105 1.4E-9 T 01-11-2018 IPR009875 PilZ domain GO:0035438 CDA09_15415 a54970a452dc8c9c2ce0e11b7d2f6efb 121 Gene3D G3DSA:2.40.10.220 6 121 2.7E-43 T 01-11-2018 CDA09_20085 3673fbe68b1a228a81cbb62246c91a14 507 Gene3D G3DSA:3.40.50.300 2 214 1.2E-77 T 01-11-2018 CDA09_20085 3673fbe68b1a228a81cbb62246c91a14 507 SMART SM00487 24 226 6.3E-62 T 01-11-2018 IPR014001 Helicase superfamily 1/2, ATP-binding domain CDA09_20085 3673fbe68b1a228a81cbb62246c91a14 507 Hamap MF_00968 ATP-dependent RNA helicase RhlE [rhlE]. 5 496 49.379 T 01-11-2018 IPR028622 ATP-dependent RNA helicase RhlE GO:0004004|GO:0042255 CDA09_20085 3673fbe68b1a228a81cbb62246c91a14 507 SUPERFAMILY SSF52540 78 363 4.18E-74 T 01-11-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CDA09_20085 3673fbe68b1a228a81cbb62246c91a14 507 Pfam PF00271 Helicase conserved C-terminal domain 236 343 1.5E-26 T 01-11-2018 IPR001650 Helicase, C-terminal CDA09_20085 3673fbe68b1a228a81cbb62246c91a14 507 ProSitePatterns PS00039 DEAD-box subfamily ATP-dependent helicases signature. 157 165 - T 01-11-2018 IPR000629 ATP-dependent RNA helicase DEAD-box, conserved site CDA09_20085 3673fbe68b1a228a81cbb62246c91a14 507 Gene3D G3DSA:3.40.50.300 217 382 7.0E-50 T 01-11-2018 CDA09_20085 3673fbe68b1a228a81cbb62246c91a14 507 Pfam PF00270 DEAD/DEAH box helicase 29 198 2.5E-49 T 01-11-2018 IPR011545 DEAD/DEAH box helicase domain GO:0003676|GO:0005524 CDA09_20085 3673fbe68b1a228a81cbb62246c91a14 507 SMART SM00490 262 343 5.3E-31 T 01-11-2018 IPR001650 Helicase, C-terminal CDA09_01510 a37120ded6728f4c713060568176f1d6 302 SUPERFAMILY SSF53335 83 253 1.48E-43 T 01-11-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase CDA09_01510 a37120ded6728f4c713060568176f1d6 302 Pfam PF13489 Methyltransferase domain 86 240 2.1E-27 T 01-11-2018 CDA09_01510 a37120ded6728f4c713060568176f1d6 302 Gene3D G3DSA:3.40.50.150 82 246 1.0E-40 T 01-11-2018 CDA09_04065 00ef0d980d4ef697014f4268119d7c60 162 TIGRFAM TIGR00125 cyt_tran_rel: cytidyltransferase-like domain 5 60 9.6E-14 T 01-11-2018 IPR004821 Cytidyltransferase-like domain GO:0003824|GO:0009058 CDA09_04065 00ef0d980d4ef697014f4268119d7c60 162 Hamap MF_00151 Phosphopantetheine adenylyltransferase [coaD]. 4 160 34.79 T 01-11-2018 IPR001980 Phosphopantetheine adenylyltransferase GO:0004595|GO:0015937 KEGG: 00770+2.7.7.3|MetaCyc: PWY-7851 CDA09_04065 00ef0d980d4ef697014f4268119d7c60 162 Pfam PF01467 Cytidylyltransferase-like 7 135 7.1E-18 T 01-11-2018 IPR004821 Cytidyltransferase-like domain GO:0003824|GO:0009058 CDA09_04065 00ef0d980d4ef697014f4268119d7c60 162 Gene3D G3DSA:3.40.50.620 1 162 1.9E-52 T 01-11-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold CDA09_04065 00ef0d980d4ef697014f4268119d7c60 162 SUPERFAMILY SSF52374 5 157 5.38E-43 T 01-11-2018 CDA09_04065 00ef0d980d4ef697014f4268119d7c60 162 PRINTS PR01020 Lipopolysaccharide core biosynthesis protein signature 51 75 4.2E-46 T 01-11-2018 IPR001980 Phosphopantetheine adenylyltransferase GO:0004595|GO:0015937 KEGG: 00770+2.7.7.3|MetaCyc: PWY-7851 CDA09_04065 00ef0d980d4ef697014f4268119d7c60 162 PRINTS PR01020 Lipopolysaccharide core biosynthesis protein signature 114 136 4.2E-46 T 01-11-2018 IPR001980 Phosphopantetheine adenylyltransferase GO:0004595|GO:0015937 KEGG: 00770+2.7.7.3|MetaCyc: PWY-7851 CDA09_04065 00ef0d980d4ef697014f4268119d7c60 162 PRINTS PR01020 Lipopolysaccharide core biosynthesis protein signature 87 103 4.2E-46 T 01-11-2018 IPR001980 Phosphopantetheine adenylyltransferase GO:0004595|GO:0015937 KEGG: 00770+2.7.7.3|MetaCyc: PWY-7851 CDA09_04065 00ef0d980d4ef697014f4268119d7c60 162 PRINTS PR01020 Lipopolysaccharide core biosynthesis protein signature 4 22 4.2E-46 T 01-11-2018 IPR001980 Phosphopantetheine adenylyltransferase GO:0004595|GO:0015937 KEGG: 00770+2.7.7.3|MetaCyc: PWY-7851 CDA09_04065 00ef0d980d4ef697014f4268119d7c60 162 PRINTS PR01020 Lipopolysaccharide core biosynthesis protein signature 22 43 4.2E-46 T 01-11-2018 IPR001980 Phosphopantetheine adenylyltransferase GO:0004595|GO:0015937 KEGG: 00770+2.7.7.3|MetaCyc: PWY-7851 CDA09_04065 00ef0d980d4ef697014f4268119d7c60 162 TIGRFAM TIGR01510 coaD_prev_kdtB: pantetheine-phosphate adenylyltransferase 5 158 4.2E-57 T 01-11-2018 IPR001980 Phosphopantetheine adenylyltransferase GO:0004595|GO:0015937 KEGG: 00770+2.7.7.3|MetaCyc: PWY-7851 CDA09_08265 ebefe9f163ee71ca3320ac0f96dd9588 310 PIRSF PIRSF028756 15 310 7.0E-134 T 01-11-2018 IPR016898 Polyphosphate kinase 2 KEGG: 00190+2.7.4.1 CDA09_08265 ebefe9f163ee71ca3320ac0f96dd9588 310 Gene3D G3DSA:3.40.50.300 14 294 2.1E-95 T 01-11-2018 CDA09_08265 ebefe9f163ee71ca3320ac0f96dd9588 310 Pfam PF03976 Polyphosphate kinase 2 (PPK2) 57 281 1.5E-111 T 01-11-2018 IPR022488 Polyphosphate kinase-2-related CDA09_08265 ebefe9f163ee71ca3320ac0f96dd9588 310 SUPERFAMILY SSF52540 86 275 1.22E-31 T 01-11-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CDA09_08265 ebefe9f163ee71ca3320ac0f96dd9588 310 TIGRFAM TIGR03707 PPK2_P_aer: polyphosphate kinase 2 56 282 1.2E-113 T 01-11-2018 IPR022486 Polyphosphate kinase 2, PA0141 GO:0006793|GO:0008976 KEGG: 00190+2.7.4.1 CDA09_02655 30b83565edf18698cb5a2532ed089840 433 SUPERFAMILY SSF52317 243 431 1.29E-29 T 01-11-2018 IPR029062 Class I glutamine amidotransferase-like CDA09_02655 30b83565edf18698cb5a2532ed089840 433 Gene3D G3DSA:3.40.50.880 253 418 2.7E-9 T 01-11-2018 IPR029062 Class I glutamine amidotransferase-like CDA09_02655 30b83565edf18698cb5a2532ed089840 433 SUPERFAMILY SSF52540 13 197 7.36E-40 T 01-11-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CDA09_02655 30b83565edf18698cb5a2532ed089840 433 Pfam PF07685 CobB/CobQ-like glutamine amidotransferase domain 244 424 2.1E-28 T 01-11-2018 IPR011698 CobB/CobQ-like glutamine amidotransferase GO:0003824|GO:0009236 CDA09_02655 30b83565edf18698cb5a2532ed089840 433 Pfam PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain 15 183 2.1E-13 T 01-11-2018 IPR002586 CobQ/CobB/MinD/ParA nucleotide binding domain CDA09_02655 30b83565edf18698cb5a2532ed089840 433 Gene3D G3DSA:3.40.50.300 13 186 2.6E-17 T 01-11-2018 CDA09_11065 49bca92ca562d650e22da746f88dbb73 341 SUPERFAMILY SSF46689 236 286 1.25E-8 T 01-11-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 CDA09_11065 49bca92ca562d650e22da746f88dbb73 341 SUPERFAMILY SSF52317 30 215 4.16E-33 T 01-11-2018 IPR029062 Class I glutamine amidotransferase-like CDA09_11065 49bca92ca562d650e22da746f88dbb73 341 Pfam PF12833 Helix-turn-helix domain 259 335 1.8E-23 T 01-11-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 CDA09_11065 49bca92ca562d650e22da746f88dbb73 341 Gene3D G3DSA:3.40.50.880 29 222 6.3E-42 T 01-11-2018 IPR029062 Class I glutamine amidotransferase-like CDA09_11065 49bca92ca562d650e22da746f88dbb73 341 Pfam PF01965 DJ-1/PfpI family 30 199 4.6E-11 T 01-11-2018 IPR002818 DJ-1/PfpI Reactome: R-HSA-3899300 CDA09_11065 49bca92ca562d650e22da746f88dbb73 341 Gene3D G3DSA:1.10.10.60 232 340 4.6E-32 T 01-11-2018 CDA09_11065 49bca92ca562d650e22da746f88dbb73 341 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 319 335 5.6E-5 T 01-11-2018 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 CDA09_11065 49bca92ca562d650e22da746f88dbb73 341 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 304 319 5.6E-5 T 01-11-2018 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 CDA09_11065 49bca92ca562d650e22da746f88dbb73 341 SMART SM00342 252 335 6.5E-30 T 01-11-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 CDA09_11065 49bca92ca562d650e22da746f88dbb73 341 SUPERFAMILY SSF46689 288 337 3.23E-12 T 01-11-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 CDA09_07765 6ed82301a01055614d64411d1e893192 141 SUPERFAMILY SSF103247 18 117 1.24E-6 T 01-11-2018 IPR035923 TT1751-like domain superfamily CDA09_22075 15a138dfc731649146b5aed5ab070dba 104 Gene3D G3DSA:4.10.520.10 1 93 4.3E-31 T 01-11-2018 IPR010992 Integration host factor (IHF)-like DNA-binding domain superfamily GO:0003677 CDA09_22075 15a138dfc731649146b5aed5ab070dba 104 SUPERFAMILY SSF47729 1 91 1.77E-29 T 01-11-2018 IPR010992 Integration host factor (IHF)-like DNA-binding domain superfamily GO:0003677 CDA09_22075 15a138dfc731649146b5aed5ab070dba 104 PRINTS PR01727 Prokaryotic integration host factor signature 75 89 6.5E-17 T 01-11-2018 IPR000119 Histone-like DNA-binding protein GO:0003677 CDA09_22075 15a138dfc731649146b5aed5ab070dba 104 PRINTS PR01727 Prokaryotic integration host factor signature 41 56 6.5E-17 T 01-11-2018 IPR000119 Histone-like DNA-binding protein GO:0003677 CDA09_22075 15a138dfc731649146b5aed5ab070dba 104 PRINTS PR01727 Prokaryotic integration host factor signature 59 72 6.5E-17 T 01-11-2018 IPR000119 Histone-like DNA-binding protein GO:0003677 CDA09_22075 15a138dfc731649146b5aed5ab070dba 104 SMART SM00411 1 91 1.0E-37 T 01-11-2018 IPR000119 Histone-like DNA-binding protein GO:0003677 CDA09_22075 15a138dfc731649146b5aed5ab070dba 104 Pfam PF00216 Bacterial DNA-binding protein 1 90 4.6E-28 T 01-11-2018 IPR000119 Histone-like DNA-binding protein GO:0003677 CDA09_22075 15a138dfc731649146b5aed5ab070dba 104 TIGRFAM TIGR00988 hip: integration host factor, beta subunit 1 91 3.9E-40 T 01-11-2018 IPR005685 Integration host factor, beta subunit GO:0003677|GO:0005694|GO:0006310|GO:0006355 CDA09_22075 15a138dfc731649146b5aed5ab070dba 104 Hamap MF_00381 Integration host factor subunit beta [ihfB]. 1 94 28.933 T 01-11-2018 IPR005685 Integration host factor, beta subunit GO:0003677|GO:0005694|GO:0006310|GO:0006355 CDA09_15705 92212707eadc129e722f6d62d5515d13 235 Pfam PF04542 Sigma-70 region 2 29 95 1.6E-15 T 01-11-2018 IPR007627 RNA polymerase sigma-70 region 2 GO:0003700|GO:0006352|GO:0006355 CDA09_15705 92212707eadc129e722f6d62d5515d13 235 Gene3D G3DSA:1.10.1740.10 5 121 6.6E-28 T 01-11-2018 CDA09_15705 92212707eadc129e722f6d62d5515d13 235 SUPERFAMILY SSF88946 5 106 4.87E-27 T 01-11-2018 IPR013325 RNA polymerase sigma factor, region 2 GO:0003700|GO:0006352|GO:0006355 CDA09_15705 92212707eadc129e722f6d62d5515d13 235 Pfam PF08281 Sigma-70, region 4 128 181 1.2E-13 T 01-11-2018 IPR013249 RNA polymerase sigma factor 70, region 4 type 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 CDA09_15705 92212707eadc129e722f6d62d5515d13 235 TIGRFAM TIGR02937 sigma70-ECF: RNA polymerase sigma factor, sigma-70 family 25 185 2.7E-32 T 01-11-2018 IPR014284 RNA polymerase sigma-70 like domain GO:0003700|GO:0006352|GO:0006355 CDA09_15705 92212707eadc129e722f6d62d5515d13 235 SUPERFAMILY SSF88659 106 187 6.17E-16 T 01-11-2018 IPR013324 RNA polymerase sigma factor, region 3/4-like CDA09_15705 92212707eadc129e722f6d62d5515d13 235 Gene3D G3DSA:1.10.10.10 122 188 7.2E-18 T 01-11-2018 IPR036388 Winged helix-like DNA-binding domain superfamily CDA09_22990 b1f9d03af293d711be0a2c9a85798ce5 368 SMART SM00283 19 287 6.8E-24 T 01-11-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 CDA09_22990 b1f9d03af293d711be0a2c9a85798ce5 368 Pfam PF13682 Chemoreceptor zinc-binding domain 262 325 4.7E-12 T 01-11-2018 IPR025991 Chemoreceptor zinc-binding domain CDA09_22990 b1f9d03af293d711be0a2c9a85798ce5 368 Gene3D G3DSA:1.10.287.950 5 269 4.9E-45 T 01-11-2018 CDA09_22990 b1f9d03af293d711be0a2c9a85798ce5 368 SUPERFAMILY SSF58104 59 263 3.01E-47 T 01-11-2018 CDA09_22990 b1f9d03af293d711be0a2c9a85798ce5 368 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 116 259 5.2E-33 T 01-11-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 CDA09_06095 2f9f122bef1c78e0519554a5519860fe 511 Gene3D G3DSA:1.10.238.260 280 392 3.0E-36 T 01-11-2018 CDA09_06095 2f9f122bef1c78e0519554a5519860fe 511 Pfam PF08502 LeuA allosteric (dimerisation) domain 370 500 1.1E-38 T 01-11-2018 IPR013709 2-isopropylmalate synthase LeuA, allosteric (dimerisation) domain GO:0003852|GO:0009098 KEGG: 00290+2.3.3.13|KEGG: 00620+2.3.3.13|MetaCyc: PWY-6871 CDA09_06095 2f9f122bef1c78e0519554a5519860fe 511 TIGRFAM TIGR00973 leuA_bact: 2-isopropylmalate synthase 5 498 6.2E-218 T 01-11-2018 IPR005671 2-isopropylmalate synthase, bacterial-type GO:0003852|GO:0009098 KEGG: 00290+2.3.3.13|KEGG: 00620+2.3.3.13|MetaCyc: PWY-6871 CDA09_06095 2f9f122bef1c78e0519554a5519860fe 511 SMART SM00917 370 501 1.2E-45 T 01-11-2018 IPR013709 2-isopropylmalate synthase LeuA, allosteric (dimerisation) domain GO:0003852|GO:0009098 KEGG: 00290+2.3.3.13|KEGG: 00620+2.3.3.13|MetaCyc: PWY-6871 CDA09_06095 2f9f122bef1c78e0519554a5519860fe 511 SUPERFAMILY SSF51569 1 291 1.9E-100 T 01-11-2018 CDA09_06095 2f9f122bef1c78e0519554a5519860fe 511 ProSitePatterns PS00816 Alpha-isopropylmalate and homocitrate synthases signature 2. 199 212 - T 01-11-2018 IPR002034 Alpha-isopropylmalate/homocitrate synthase, conserved site GO:0019752|GO:0046912 KEGG: 00290+2.3.3.13|KEGG: 00620+2.3.3.13|MetaCyc: PWY-6871 CDA09_06095 2f9f122bef1c78e0519554a5519860fe 511 Gene3D G3DSA:3.20.20.70 2 276 2.5E-109 T 01-11-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 CDA09_06095 2f9f122bef1c78e0519554a5519860fe 511 Hamap MF_01025 2-isopropylmalate synthase [leuA]. 2 510 43.403 T 01-11-2018 IPR005671 2-isopropylmalate synthase, bacterial-type GO:0003852|GO:0009098 KEGG: 00290+2.3.3.13|KEGG: 00620+2.3.3.13|MetaCyc: PWY-6871 CDA09_06095 2f9f122bef1c78e0519554a5519860fe 511 ProSitePatterns PS00815 Alpha-isopropylmalate and homocitrate synthases signature 1. 12 28 - T 01-11-2018 IPR002034 Alpha-isopropylmalate/homocitrate synthase, conserved site GO:0019752|GO:0046912 KEGG: 00290+2.3.3.13|KEGG: 00620+2.3.3.13|MetaCyc: PWY-6871 CDA09_06095 2f9f122bef1c78e0519554a5519860fe 511 SUPERFAMILY SSF110921 391 500 2.48E-27 T 01-11-2018 IPR036230 2-isopropylmalate synthase LeuA, allosteric (dimerisation) domain superfamily KEGG: 00290+2.3.3.13|KEGG: 00620+2.3.3.13|MetaCyc: PWY-6871 CDA09_06095 2f9f122bef1c78e0519554a5519860fe 511 Pfam PF00682 HMGL-like 5 273 9.1E-99 T 01-11-2018 IPR000891 Pyruvate carboxyltransferase GO:0003824 CDA09_06095 2f9f122bef1c78e0519554a5519860fe 511 Gene3D G3DSA:3.30.160.270 393 501 3.5E-13 T 01-11-2018 CDA09_16350 3db9a5d9ae35e8efb97fb7c08332ae5e 192 SUPERFAMILY SSF51064 136 190 4.45E-18 T 01-11-2018 IPR009012 GrpE nucleotide exchange factor, head GO:0006457 Reactome: R-HSA-1268020 CDA09_16350 3db9a5d9ae35e8efb97fb7c08332ae5e 192 Hamap MF_01151 Protein GrpE [grpE]. 2 188 19.395 T 01-11-2018 IPR000740 GrpE nucleotide exchange factor GO:0000774|GO:0006457|GO:0042803|GO:0051087 Reactome: R-HSA-1268020 CDA09_16350 3db9a5d9ae35e8efb97fb7c08332ae5e 192 PRINTS PR00773 GrpE protein signature 89 104 9.6E-26 T 01-11-2018 IPR000740 GrpE nucleotide exchange factor GO:0000774|GO:0006457|GO:0042803|GO:0051087 Reactome: R-HSA-1268020 CDA09_16350 3db9a5d9ae35e8efb97fb7c08332ae5e 192 PRINTS PR00773 GrpE protein signature 61 77 9.6E-26 T 01-11-2018 IPR000740 GrpE nucleotide exchange factor GO:0000774|GO:0006457|GO:0042803|GO:0051087 Reactome: R-HSA-1268020 CDA09_16350 3db9a5d9ae35e8efb97fb7c08332ae5e 192 PRINTS PR00773 GrpE protein signature 167 186 9.6E-26 T 01-11-2018 IPR000740 GrpE nucleotide exchange factor GO:0000774|GO:0006457|GO:0042803|GO:0051087 Reactome: R-HSA-1268020 CDA09_16350 3db9a5d9ae35e8efb97fb7c08332ae5e 192 PRINTS PR00773 GrpE protein signature 141 156 9.6E-26 T 01-11-2018 IPR000740 GrpE nucleotide exchange factor GO:0000774|GO:0006457|GO:0042803|GO:0051087 Reactome: R-HSA-1268020 CDA09_16350 3db9a5d9ae35e8efb97fb7c08332ae5e 192 SUPERFAMILY SSF58014 40 133 3.01E-24 T 01-11-2018 IPR013805 GrpE nucleotide exchange factor, coiled-coil Reactome: R-HSA-1268020 CDA09_16350 3db9a5d9ae35e8efb97fb7c08332ae5e 192 ProSitePatterns PS01071 grpE protein signature. 144 186 - T 01-11-2018 IPR000740 GrpE nucleotide exchange factor GO:0000774|GO:0006457|GO:0042803|GO:0051087 Reactome: R-HSA-1268020 CDA09_16350 3db9a5d9ae35e8efb97fb7c08332ae5e 192 Gene3D G3DSA:2.30.22.10 133 188 5.0E-23 T 01-11-2018 IPR009012 GrpE nucleotide exchange factor, head GO:0006457 Reactome: R-HSA-1268020 CDA09_16350 3db9a5d9ae35e8efb97fb7c08332ae5e 192 Gene3D G3DSA:3.90.20.20 31 131 2.7E-25 T 01-11-2018 IPR013805 GrpE nucleotide exchange factor, coiled-coil Reactome: R-HSA-1268020 CDA09_16350 3db9a5d9ae35e8efb97fb7c08332ae5e 192 Pfam PF01025 GrpE 33 188 1.1E-48 T 01-11-2018 IPR000740 GrpE nucleotide exchange factor GO:0000774|GO:0006457|GO:0042803|GO:0051087 Reactome: R-HSA-1268020 CDA09_09605 206fe38704b269b0836496069087336c 320 Pfam PF01796 DUF35 OB-fold domain, acyl-CoA-associated 55 120 6.7E-20 T 01-11-2018 IPR002878 Domain of unknown function DUF35, OB-fold, C-terminal CDA09_09605 206fe38704b269b0836496069087336c 320 SUPERFAMILY SSF50249 4 126 4.8E-37 T 01-11-2018 IPR012340 Nucleic acid-binding, OB-fold CDA09_09605 206fe38704b269b0836496069087336c 320 Gene3D G3DSA:1.10.12.20 8 58 7.7E-6 T 01-11-2018 CDA09_09605 206fe38704b269b0836496069087336c 320 Pfam PF12172 Rubredoxin-like zinc ribbon domain (DUF35_N) 18 54 5.9E-13 T 01-11-2018 IPR022002 Domain of unknown function DUF35, rubredoxin-like zinc ribbon domain, N-terminal CDA09_09605 206fe38704b269b0836496069087336c 320 SUPERFAMILY SSF54637 188 305 5.08E-26 T 01-11-2018 IPR029069 HotDog domain superfamily CDA09_09605 206fe38704b269b0836496069087336c 320 Gene3D G3DSA:3.10.129.10 170 320 1.5E-32 T 01-11-2018 CDA09_09605 206fe38704b269b0836496069087336c 320 Pfam PF01575 MaoC like domain 192 297 9.5E-18 T 01-11-2018 IPR002539 MaoC-like dehydratase domain CDA09_03995 5b8cfac0d6834b4040944ff2e3fb99c4 532 Pfam PF13231 Dolichyl-phosphate-mannose-protein mannosyltransferase 92 227 1.4E-7 T 01-11-2018 IPR038731 Glycosyltransferase RgtA/B/C/D-like CDA09_09990 5b38e64dde988e06d417e43d0bb94e20 387 SUPERFAMILY SSF53901 3 233 2.11E-22 T 01-11-2018 IPR016039 Thiolase-like GO:0003824 CDA09_09990 5b38e64dde988e06d417e43d0bb94e20 387 SUPERFAMILY SSF53901 261 375 5.14E-22 T 01-11-2018 IPR016039 Thiolase-like GO:0003824 CDA09_09990 5b38e64dde988e06d417e43d0bb94e20 387 PIRSF PIRSF000429 1 385 3.5E-24 T 01-11-2018 IPR002155 Thiolase GO:0016747 CDA09_09990 5b38e64dde988e06d417e43d0bb94e20 387 Gene3D G3DSA:3.40.47.10 1 387 6.8E-108 T 01-11-2018 IPR016039 Thiolase-like GO:0003824 CDA09_17510 a8f25348b4c587a04aad1d36c006d9ee 103 Pfam PF13442 Cytochrome C oxidase, cbb3-type, subunit III 18 88 5.5E-10 T 01-11-2018 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 Reactome: R-HSA-111457|Reactome: R-HSA-111458|Reactome: R-HSA-111459|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 CDA09_17510 a8f25348b4c587a04aad1d36c006d9ee 103 Gene3D G3DSA:1.10.760.10 2 93 3.4E-13 T 01-11-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 CDA09_17510 a8f25348b4c587a04aad1d36c006d9ee 103 SUPERFAMILY SSF46626 6 92 1.15E-15 T 01-11-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 CDA09_01045 63c88dff089cb6084442408446e5d5ff 181 SUPERFAMILY SSF52172 5 119 2.13E-27 T 01-11-2018 IPR011006 CheY-like superfamily CDA09_01045 63c88dff089cb6084442408446e5d5ff 181 Gene3D G3DSA:3.40.50.2300 3 126 2.5E-25 T 01-11-2018 CDA09_01045 63c88dff089cb6084442408446e5d5ff 181 Pfam PF00072 Response regulator receiver domain 7 115 6.8E-20 T 01-11-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 CDA09_01045 63c88dff089cb6084442408446e5d5ff 181 SMART SM00448 5 116 4.8E-20 T 01-11-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 CDA09_10215 d914158d8b1dcf0bfc12295b0f544226 328 SUPERFAMILY SSF47240 3 327 4.6E-107 T 01-11-2018 IPR009078 Ferritin-like superfamily CDA09_10215 d914158d8b1dcf0bfc12295b0f544226 328 Pfam PF02332 Methane/Phenol/Toluene Hydroxylase 63 276 1.8E-70 T 01-11-2018 IPR003430 Methane/phenol/toluene hydroxylase GO:0006725|GO:0055114 CDA09_10215 d914158d8b1dcf0bfc12295b0f544226 328 Gene3D G3DSA:1.10.620.20 6 327 1.3E-116 T 01-11-2018 IPR012348 Ribonucleotide reductase-like GO:0016491|GO:0055114 Reactome: R-HSA-499943 CDA09_10215 d914158d8b1dcf0bfc12295b0f544226 328 PIRSF PIRSF000040 1 328 6.2E-110 T 01-11-2018 IPR012078 Methane/phenol monooxygenase, hydroxylase component GO:0016709|GO:0055114 CDA09_10130 999ba6deaa442dbe621f7044f4413415 440 Pfam PF13751 Transposase DDE domain 356 434 5.0E-17 T 01-11-2018 IPR025668 Transposase DDE domain CDA09_10130 999ba6deaa442dbe621f7044f4413415 440 Pfam PF05598 Transposase domain (DUF772) 56 123 4.6E-13 T 01-11-2018 IPR008490 Transposase InsH, N-terminal CDA09_06975 999ba6deaa442dbe621f7044f4413415 440 Pfam PF13751 Transposase DDE domain 356 434 5.0E-17 T 01-11-2018 IPR025668 Transposase DDE domain CDA09_06975 999ba6deaa442dbe621f7044f4413415 440 Pfam PF05598 Transposase domain (DUF772) 56 123 4.6E-13 T 01-11-2018 IPR008490 Transposase InsH, N-terminal CDA09_11005 999ba6deaa442dbe621f7044f4413415 440 Pfam PF13751 Transposase DDE domain 356 434 5.0E-17 T 01-11-2018 IPR025668 Transposase DDE domain CDA09_11005 999ba6deaa442dbe621f7044f4413415 440 Pfam PF05598 Transposase domain (DUF772) 56 123 4.6E-13 T 01-11-2018 IPR008490 Transposase InsH, N-terminal CDA09_04680 999ba6deaa442dbe621f7044f4413415 440 Pfam PF13751 Transposase DDE domain 356 434 5.0E-17 T 01-11-2018 IPR025668 Transposase DDE domain CDA09_04680 999ba6deaa442dbe621f7044f4413415 440 Pfam PF05598 Transposase domain (DUF772) 56 123 4.6E-13 T 01-11-2018 IPR008490 Transposase InsH, N-terminal CDA09_11770 fc717aa8fea68d6f7e7ccb271705ad3b 255 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 82 93 2.1E-42 T 01-11-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CDA09_11770 fc717aa8fea68d6f7e7ccb271705ad3b 255 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 129 145 2.1E-42 T 01-11-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CDA09_11770 fc717aa8fea68d6f7e7ccb271705ad3b 255 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 176 193 2.1E-42 T 01-11-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CDA09_11770 fc717aa8fea68d6f7e7ccb271705ad3b 255 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 215 235 2.1E-42 T 01-11-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CDA09_11770 fc717aa8fea68d6f7e7ccb271705ad3b 255 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 8 25 2.1E-42 T 01-11-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CDA09_11770 fc717aa8fea68d6f7e7ccb271705ad3b 255 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 155 174 2.1E-42 T 01-11-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CDA09_11770 fc717aa8fea68d6f7e7ccb271705ad3b 255 SUPERFAMILY SSF51735 5 253 5.63E-80 T 01-11-2018 IPR036291 NAD(P)-binding domain superfamily CDA09_11770 fc717aa8fea68d6f7e7ccb271705ad3b 255 TIGRFAM TIGR03206 benzo_BadH: 2-hydroxycyclohexanecarboxyl-CoA dehydrogenase 4 253 3.2E-138 T 01-11-2018 IPR017619 2-hydroxycyclohexanecarboxyl-CoA dehydrogenase CDA09_11770 fc717aa8fea68d6f7e7ccb271705ad3b 255 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 82 93 3.1E-11 T 01-11-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CDA09_11770 fc717aa8fea68d6f7e7ccb271705ad3b 255 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 135 143 3.1E-11 T 01-11-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CDA09_11770 fc717aa8fea68d6f7e7ccb271705ad3b 255 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 155 174 3.1E-11 T 01-11-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CDA09_11770 fc717aa8fea68d6f7e7ccb271705ad3b 255 Gene3D G3DSA:3.40.50.720 1 254 3.5E-81 T 01-11-2018 CDA09_11770 fc717aa8fea68d6f7e7ccb271705ad3b 255 SMART SM00822 This enzymatic domain is part of bacterial polyketide synthases and catalyses the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain. It uses NADPH to reduce the keto group to a hydroxy group. 7 190 0.0029 T 01-11-2018 CDA09_11770 fc717aa8fea68d6f7e7ccb271705ad3b 255 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 14 252 8.0E-61 T 01-11-2018 CDA09_01275 fa28db54022b1ee04194a2694ddad114 296 Gene3D G3DSA:3.30.70.20 232 295 1.2E-5 T 01-11-2018 CDA09_01275 fa28db54022b1ee04194a2694ddad114 296 SUPERFAMILY SSF54862 104 290 6.98E-18 T 01-11-2018 CDA09_01275 fa28db54022b1ee04194a2694ddad114 296 Pfam PF12837 4Fe-4S binding domain 229 251 1.9E-5 T 01-11-2018 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain CDA09_01275 fa28db54022b1ee04194a2694ddad114 296 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 270 281 - T 01-11-2018 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site CDA09_01275 fa28db54022b1ee04194a2694ddad114 296 TIGRFAM TIGR02163 napH_: ferredoxin-type protein, NapH/MauN family 33 288 4.4E-104 T 01-11-2018 IPR011886 Ferredoxin-type protein, NapH/MauN family CDA09_01275 fa28db54022b1ee04194a2694ddad114 296 Pfam PF12801 4Fe-4S binding domain 192 221 4.6E-4 T 01-11-2018 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain CDA09_01275 fa28db54022b1ee04194a2694ddad114 296 Pfam PF12801 4Fe-4S binding domain 95 137 1.5E-13 T 01-11-2018 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain CDA09_13125 6fd919c8e1de4d463a82363e5f9d6413 263 Gene3D G3DSA:3.40.50.720 1 259 8.6E-57 T 01-11-2018 CDA09_13125 6fd919c8e1de4d463a82363e5f9d6413 263 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 181 198 5.8E-9 T 01-11-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CDA09_13125 6fd919c8e1de4d463a82363e5f9d6413 263 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 160 179 5.8E-9 T 01-11-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CDA09_13125 6fd919c8e1de4d463a82363e5f9d6413 263 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 216 236 5.8E-9 T 01-11-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CDA09_13125 6fd919c8e1de4d463a82363e5f9d6413 263 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 134 150 5.8E-9 T 01-11-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CDA09_13125 6fd919c8e1de4d463a82363e5f9d6413 263 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 18 253 3.2E-84 T 01-11-2018 CDA09_13125 6fd919c8e1de4d463a82363e5f9d6413 263 SUPERFAMILY SSF51735 6 253 8.52E-64 T 01-11-2018 IPR036291 NAD(P)-binding domain superfamily CDA09_13125 6fd919c8e1de4d463a82363e5f9d6413 263 PIRSF PIRSF000094 1 261 6.5E-113 T 01-11-2018 IPR014358 Enoyl-[acyl-carrier-protein] reductase (NADH) GO:0004318|GO:0006633|GO:0055114 KEGG: 00061+1.3.1.9|MetaCyc: PWY-5971|MetaCyc: PWY-5973|MetaCyc: PWY-5989|MetaCyc: PWY-6113|MetaCyc: PWY-6282|MetaCyc: PWY-6519|MetaCyc: PWY-7663|MetaCyc: PWY-7664|MetaCyc: PWY-7858|MetaCyc: PWYG-321 CDA09_02480 a43a638d5cf3dc2ff8b99765803dcf18 122 SUPERFAMILY SSF81301 1 108 3.11E-37 T 01-11-2018 CDA09_02480 a43a638d5cf3dc2ff8b99765803dcf18 122 Gene3D G3DSA:3.30.460.10 1 115 2.1E-36 T 01-11-2018 CDA09_02480 a43a638d5cf3dc2ff8b99765803dcf18 122 TIGRFAM TIGR00090 rsfS_iojap_ybeB: ribosome silencing factor 8 104 1.3E-36 T 01-11-2018 IPR004394 Protein Iojap/ribosomal silencing factor RsfS CDA09_02480 a43a638d5cf3dc2ff8b99765803dcf18 122 Hamap MF_01477 Ribosomal silencing factor RsfS [rsfS]. 1 105 24.484 T 01-11-2018 IPR004394 Protein Iojap/ribosomal silencing factor RsfS CDA09_02480 a43a638d5cf3dc2ff8b99765803dcf18 122 Pfam PF02410 Ribosomal silencing factor during starvation 9 104 7.1E-28 T 01-11-2018 CDA09_00725 d7c219b2b0797627ded382ba473c126e 366 Pfam PF00724 NADH:flavin oxidoreductase / NADH oxidase family 4 343 1.2E-59 T 01-11-2018 IPR001155 NADH:flavin oxidoreductase/NADH oxidase, N-terminal GO:0010181|GO:0016491|GO:0055114 CDA09_00725 d7c219b2b0797627ded382ba473c126e 366 SUPERFAMILY SSF51395 2 345 6.54E-102 T 01-11-2018 CDA09_00725 d7c219b2b0797627ded382ba473c126e 366 Gene3D G3DSA:3.20.20.70 1 363 2.1E-116 T 01-11-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 CDA09_06735 2ae6ed3727ce7d7a7246b9d5966de3c1 260 TIGRFAM TIGR02488 flgG_G_neg: flagellar basal-body rod protein FlgG 4 259 3.2E-114 T 01-11-2018 IPR012834 Flagellar basal-body rod FlgG GO:0009426|GO:0071973 CDA09_06735 2ae6ed3727ce7d7a7246b9d5966de3c1 260 ProSitePatterns PS00588 Flagella basal body rod proteins signature. 11 31 - T 01-11-2018 IPR019776 Flagellar basal body rod protein, conserved site CDA09_06735 2ae6ed3727ce7d7a7246b9d5966de3c1 260 TIGRFAM TIGR03506 FlgEFG_subfam: flagellar hook-basal body protein 4 136 2.0E-51 T 01-11-2018 IPR020013 Flagellar hook-basal body protein, FlgE/F/G CDA09_06735 2ae6ed3727ce7d7a7246b9d5966de3c1 260 TIGRFAM TIGR03506 FlgEFG_subfam: flagellar hook-basal body protein 148 243 4.1E-28 T 01-11-2018 IPR020013 Flagellar hook-basal body protein, FlgE/F/G CDA09_06735 2ae6ed3727ce7d7a7246b9d5966de3c1 260 Pfam PF06429 Flagellar basal body rod FlgEFG protein C-terminal 183 260 6.2E-23 T 01-11-2018 IPR010930 Flagellar basal-body/hook protein, C-terminal domain CDA09_06735 2ae6ed3727ce7d7a7246b9d5966de3c1 260 SUPERFAMILY SSF117143 92 222 1.01E-34 T 01-11-2018 IPR037925 Flagellar hook-basal body protein, FlgE/F/G-like CDA09_06735 2ae6ed3727ce7d7a7246b9d5966de3c1 260 Pfam PF00460 Flagella basal body rod protein 5 35 1.1E-13 T 01-11-2018 IPR001444 Flagellar basal body rod protein, N-terminal GO:0071973 CDA09_09420 3822b6b6675f30def7019bc5b61c0097 388 Pfam PF02771 Acyl-CoA dehydrogenase, N-terminal domain 6 120 5.5E-17 T 01-11-2018 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal GO:0016627|GO:0050660|GO:0055114 CDA09_09420 3822b6b6675f30def7019bc5b61c0097 388 SUPERFAMILY SSF47203 230 379 4.51E-35 T 01-11-2018 IPR036250 Acyl-CoA dehydrogenase-like, C-terminal GO:0016627|GO:0055114 CDA09_09420 3822b6b6675f30def7019bc5b61c0097 388 Pfam PF00441 Acyl-CoA dehydrogenase, C-terminal domain 231 373 1.6E-26 T 01-11-2018 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal GO:0016627|GO:0055114 CDA09_09420 3822b6b6675f30def7019bc5b61c0097 388 SUPERFAMILY SSF56645 1 234 6.41E-47 T 01-11-2018 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain superfamily GO:0016627|GO:0055114 CDA09_09420 3822b6b6675f30def7019bc5b61c0097 388 Gene3D G3DSA:1.10.540.10 3 121 7.6E-26 T 01-11-2018 IPR037069 Acyl-CoA dehydrogenase/oxidase, N-terminal domain superfamily GO:0016627|GO:0050660|GO:0055114 CDA09_09420 3822b6b6675f30def7019bc5b61c0097 388 Pfam PF02770 Acyl-CoA dehydrogenase, middle domain 134 216 1.1E-11 T 01-11-2018 IPR006091 Acyl-CoA oxidase/dehydrogenase, central domain GO:0016627|GO:0055114 CDA09_09420 3822b6b6675f30def7019bc5b61c0097 388 Gene3D G3DSA:1.20.140.10 234 383 9.3E-33 T 01-11-2018 CDA09_09420 3822b6b6675f30def7019bc5b61c0097 388 Gene3D G3DSA:2.40.110.10 124 233 6.5E-23 T 01-11-2018 CDA09_22635 b2146a062096ae9cc55c24720c677dbf 442 Pfam PF00291 Pyridoxal-phosphate dependent enzyme 84 382 4.7E-45 T 01-11-2018 IPR001926 Pyridoxal-phosphate dependent enzyme CDA09_22635 b2146a062096ae9cc55c24720c677dbf 442 Gene3D G3DSA:3.40.50.1100 104 226 8.0E-162 T 01-11-2018 CDA09_22635 b2146a062096ae9cc55c24720c677dbf 442 SUPERFAMILY SSF53686 89 420 8.64E-48 T 01-11-2018 IPR036052 Tryptophan synthase beta subunit-like PLP-dependent enzyme CDA09_22635 b2146a062096ae9cc55c24720c677dbf 442 Hamap MF_01030 D-serine dehydratase [dsdA]. 1 442 192.941 T 01-11-2018 IPR011780 D-serine ammonia-lyase GO:0008721|GO:0030170|GO:0046416 KEGG: 00260+4.3.1.18 CDA09_22635 b2146a062096ae9cc55c24720c677dbf 442 TIGRFAM TIGR02035 D_Ser_am_lyase: D-serine ammonia-lyase 8 425 2.5E-146 T 01-11-2018 IPR011780 D-serine ammonia-lyase GO:0008721|GO:0030170|GO:0046416 KEGG: 00260+4.3.1.18 CDA09_22635 b2146a062096ae9cc55c24720c677dbf 442 Gene3D G3DSA:3.40.50.1100 17 425 8.0E-162 T 01-11-2018 CDA09_20815 7b5d3a610980f1033a550b42d4ae23f8 319 Gene3D G3DSA:3.30.1330.10 2 140 8.3E-48 T 01-11-2018 IPR036921 PurM-like, N-terminal domain superfamily CDA09_20815 7b5d3a610980f1033a550b42d4ae23f8 319 Pfam PF00586 AIR synthase related protein, N-terminal domain 25 134 8.8E-25 T 01-11-2018 IPR016188 PurM-like, N-terminal domain CDA09_20815 7b5d3a610980f1033a550b42d4ae23f8 319 SUPERFAMILY SSF56042 139 301 2.69E-37 T 01-11-2018 IPR036676 PurM-like, C-terminal domain superfamily CDA09_20815 7b5d3a610980f1033a550b42d4ae23f8 319 SUPERFAMILY SSF55326 4 134 2.27E-34 T 01-11-2018 IPR036921 PurM-like, N-terminal domain superfamily CDA09_20815 7b5d3a610980f1033a550b42d4ae23f8 319 Gene3D G3DSA:3.90.650.10 141 319 5.1E-55 T 01-11-2018 IPR036676 PurM-like, C-terminal domain superfamily CDA09_20815 7b5d3a610980f1033a550b42d4ae23f8 319 PIRSF PIRSF005303 2 318 3.0E-86 T 01-11-2018 IPR006283 Thiamine-monophosphate kinase GO:0009030|GO:0009228 KEGG: 00730+2.7.4.16|MetaCyc: PWY-6893|MetaCyc: PWY-6894|MetaCyc: PWY-6896|MetaCyc: PWY-6897 CDA09_20815 7b5d3a610980f1033a550b42d4ae23f8 319 Pfam PF02769 AIR synthase related protein, C-terminal domain 146 295 7.7E-9 T 01-11-2018 IPR010918 PurM-like, C-terminal domain CDA09_20815 7b5d3a610980f1033a550b42d4ae23f8 319 TIGRFAM TIGR01379 thiL: thiamine-phosphate kinase 4 318 4.3E-103 T 01-11-2018 IPR006283 Thiamine-monophosphate kinase GO:0009030|GO:0009228 KEGG: 00730+2.7.4.16|MetaCyc: PWY-6893|MetaCyc: PWY-6894|MetaCyc: PWY-6896|MetaCyc: PWY-6897 CDA09_20815 7b5d3a610980f1033a550b42d4ae23f8 319 Hamap MF_02128 Thiamine-monophosphate kinase [thiL]. 2 318 27.546 T 01-11-2018 IPR006283 Thiamine-monophosphate kinase GO:0009030|GO:0009228 KEGG: 00730+2.7.4.16|MetaCyc: PWY-6893|MetaCyc: PWY-6894|MetaCyc: PWY-6896|MetaCyc: PWY-6897 CDA09_09320 68b8ea4f7cc2cb7b81e9d8e52c021358 115 Pfam PF05717 IS66 Orf2 like protein 9 105 7.5E-41 T 01-11-2018 IPR008878 Transposase IS66, Orf2 CDA09_04195 ef9a23ac8803709729034992e346050d 405 Pfam PF00437 Type II/IV secretion system protein 75 282 6.1E-39 T 01-11-2018 IPR001482 Type II/IV secretion system protein CDA09_04195 ef9a23ac8803709729034992e346050d 405 ProSitePatterns PS00662 Bacterial type II secretion system protein E signature. 204 218 - T 01-11-2018 IPR001482 Type II/IV secretion system protein CDA09_04195 ef9a23ac8803709729034992e346050d 405 TIGRFAM TIGR01420 pilT_fam: twitching motility protein 14 355 7.9E-138 T 01-11-2018 IPR006321 Pilus retraction protein PilT GO:0005524 CDA09_04195 ef9a23ac8803709729034992e346050d 405 Gene3D G3DSA:3.40.50.300 112 367 2.3E-91 T 01-11-2018 CDA09_04195 ef9a23ac8803709729034992e346050d 405 SUPERFAMILY SSF52540 5 348 6.71E-70 T 01-11-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CDA09_04195 ef9a23ac8803709729034992e346050d 405 Gene3D G3DSA:3.30.450.90 6 111 2.2E-29 T 01-11-2018 CDA09_06730 4e51aceee21674778a191619db79c70a 246 TIGRFAM TIGR02490 flgF: flagellar basal-body rod protein FlgF 5 223 4.2E-56 T 01-11-2018 IPR012836 Flagellar basal-body rod FlgF GO:0030694|GO:0071973 CDA09_06730 4e51aceee21674778a191619db79c70a 246 SUPERFAMILY SSF117143 77 204 2.62E-20 T 01-11-2018 IPR037925 Flagellar hook-basal body protein, FlgE/F/G-like CDA09_06730 4e51aceee21674778a191619db79c70a 246 Pfam PF06429 Flagellar basal body rod FlgEFG protein C-terminal 171 242 6.3E-23 T 01-11-2018 IPR010930 Flagellar basal-body/hook protein, C-terminal domain CDA09_06730 4e51aceee21674778a191619db79c70a 246 TIGRFAM TIGR03506 FlgEFG_subfam: flagellar hook-basal body protein 4 121 2.5E-35 T 01-11-2018 IPR020013 Flagellar hook-basal body protein, FlgE/F/G CDA09_05160 8fb466e03cf0cc527646cb5f57414c78 338 ProSitePatterns PS00071 Glyceraldehyde 3-phosphate dehydrogenase active site. 154 161 - T 01-11-2018 IPR020830 Glyceraldehyde 3-phosphate dehydrogenase, active site GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 CDA09_05160 8fb466e03cf0cc527646cb5f57414c78 338 TIGRFAM TIGR01534 GAPDH-I: glyceraldehyde-3-phosphate dehydrogenase, type I 4 329 1.4E-128 T 01-11-2018 IPR006424 Glyceraldehyde-3-phosphate dehydrogenase, type I GO:0006006|GO:0016620|GO:0050661|GO:0051287|GO:0055114 KEGG: 00010+1.2.1.12|KEGG: 00710+1.2.1.12|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 CDA09_05160 8fb466e03cf0cc527646cb5f57414c78 338 Pfam PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain 161 317 5.9E-70 T 01-11-2018 IPR020829 Glyceraldehyde 3-phosphate dehydrogenase, catalytic domain GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 CDA09_05160 8fb466e03cf0cc527646cb5f57414c78 338 SUPERFAMILY SSF51735 1 182 1.91E-56 T 01-11-2018 IPR036291 NAD(P)-binding domain superfamily CDA09_05160 8fb466e03cf0cc527646cb5f57414c78 338 Pfam PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain 3 106 8.7E-33 T 01-11-2018 IPR020828 Glyceraldehyde 3-phosphate dehydrogenase, NAD(P) binding domain GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 CDA09_05160 8fb466e03cf0cc527646cb5f57414c78 338 PIRSF PIRSF000149 1 338 4.0E-137 T 01-11-2018 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 CDA09_05160 8fb466e03cf0cc527646cb5f57414c78 338 PRINTS PR00078 Glyceraldehyde-3-phosphate dehydrogenase signature 113 126 1.4E-38 T 01-11-2018 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 CDA09_05160 8fb466e03cf0cc527646cb5f57414c78 338 PRINTS PR00078 Glyceraldehyde-3-phosphate dehydrogenase signature 177 193 1.4E-38 T 01-11-2018 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 CDA09_05160 8fb466e03cf0cc527646cb5f57414c78 338 PRINTS PR00078 Glyceraldehyde-3-phosphate dehydrogenase signature 150 168 1.4E-38 T 01-11-2018 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 CDA09_05160 8fb466e03cf0cc527646cb5f57414c78 338 PRINTS PR00078 Glyceraldehyde-3-phosphate dehydrogenase signature 233 250 1.4E-38 T 01-11-2018 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 CDA09_05160 8fb466e03cf0cc527646cb5f57414c78 338 PRINTS PR00078 Glyceraldehyde-3-phosphate dehydrogenase signature 273 288 1.4E-38 T 01-11-2018 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 CDA09_05160 8fb466e03cf0cc527646cb5f57414c78 338 Gene3D G3DSA:3.30.360.10 155 319 2.1E-146 T 01-11-2018 CDA09_05160 8fb466e03cf0cc527646cb5f57414c78 338 SMART SM00846 3 156 2.4E-83 T 01-11-2018 IPR020828 Glyceraldehyde 3-phosphate dehydrogenase, NAD(P) binding domain GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 CDA09_05160 8fb466e03cf0cc527646cb5f57414c78 338 Gene3D G3DSA:3.40.50.720 4 329 2.1E-146 T 01-11-2018 CDA09_05160 8fb466e03cf0cc527646cb5f57414c78 338 SUPERFAMILY SSF55347 155 317 2.0E-74 T 01-11-2018 CDA09_11450 46d9d7ee3116c6a3b7c8ae6ff994694a 360 SUPERFAMILY SSF53067 13 181 6.8E-5 T 01-11-2018 CDA09_11450 46d9d7ee3116c6a3b7c8ae6ff994694a 360 Gene3D G3DSA:3.30.420.190 128 359 2.8E-65 T 01-11-2018 CDA09_11450 46d9d7ee3116c6a3b7c8ae6ff994694a 360 Pfam PF01968 Hydantoinase/oxoprolinase 71 324 2.3E-10 T 01-11-2018 IPR002821 Hydantoinase A/oxoprolinase GO:0016787 Reactome: R-HSA-174403|Reactome: R-HSA-5578998 CDA09_11450 46d9d7ee3116c6a3b7c8ae6ff994694a 360 Gene3D G3DSA:3.30.420.40 12 127 4.5E-15 T 01-11-2018 CDA09_11450 46d9d7ee3116c6a3b7c8ae6ff994694a 360 TIGRFAM TIGR03123 one_C_unchar_1: probable H4MPT-linked C1 transfer pathway protein 14 353 2.1E-95 T 01-11-2018 IPR002756 4-[[4-(2-aminoethyl)phenoxy]-methyl]-2-furanmethanamine-glutamate synthase KEGG: 00680+2.5.1.131|MetaCyc: PWY-5254 CDA09_00700 bbd400aa0cf7d2c501b299d55804887f 474 Pfam PF00561 alpha/beta hydrolase fold 136 419 5.7E-15 T 01-11-2018 IPR000073 Alpha/beta hydrolase fold-1 CDA09_00700 bbd400aa0cf7d2c501b299d55804887f 474 Gene3D G3DSA:3.40.50.1820 114 442 9.3E-41 T 01-11-2018 IPR029058 Alpha/Beta hydrolase fold CDA09_00700 bbd400aa0cf7d2c501b299d55804887f 474 SUPERFAMILY SSF53474 114 438 6.15E-40 T 01-11-2018 IPR029058 Alpha/Beta hydrolase fold CDA09_09770 74755874cd8cc28e089badd6226a68ed 98 TIGRFAM TIGR02683 upstrm_HI1419: putative addiction module killer protein 3 95 9.3E-39 T 01-11-2018 IPR014056 Addiction module killer protein, predicted CDA09_09770 74755874cd8cc28e089badd6226a68ed 98 Pfam PF05973 Phage derived protein Gp49-like (DUF891) 12 94 1.5E-6 T 01-11-2018 IPR009241 Toxin HigB-like CDA09_09770 74755874cd8cc28e089badd6226a68ed 98 PIRSF PIRSF028744 1 98 6.8E-40 T 01-11-2018 IPR014056 Addiction module killer protein, predicted CDA09_20685 a7cd657075bf11f15a93c1dda37a88bb 176 Pfam PF00691 OmpA family 71 166 8.3E-17 T 01-11-2018 IPR006665 OmpA-like domain CDA09_20685 a7cd657075bf11f15a93c1dda37a88bb 176 TIGRFAM TIGR02802 Pal_lipo: peptidoglycan-associated lipoprotein 70 172 1.6E-40 T 01-11-2018 IPR014169 Peptidoglycan-associated lipoprotein, C-terminal GO:0009279 CDA09_20685 a7cd657075bf11f15a93c1dda37a88bb 176 PRINTS PR01021 OMPA domain signature 102 117 3.4E-13 T 01-11-2018 IPR006664 Outer membrane protein, bacterial GO:0009279|GO:0016021 CDA09_20685 a7cd657075bf11f15a93c1dda37a88bb 176 PRINTS PR01021 OMPA domain signature 72 94 3.4E-13 T 01-11-2018 IPR006664 Outer membrane protein, bacterial GO:0009279|GO:0016021 CDA09_20685 a7cd657075bf11f15a93c1dda37a88bb 176 PRINTS PR01021 OMPA domain signature 117 133 3.4E-13 T 01-11-2018 IPR006664 Outer membrane protein, bacterial GO:0009279|GO:0016021 CDA09_20685 a7cd657075bf11f15a93c1dda37a88bb 176 Hamap MF_02204 Peptidoglycan-associated lipoprotein [pal]. 1 172 27.485 T 01-11-2018 IPR039001 Peptidoglycan-associated lipoprotein GO:0009279|GO:0051301 CDA09_20685 a7cd657075bf11f15a93c1dda37a88bb 176 SUPERFAMILY SSF103088 61 169 7.98E-29 T 01-11-2018 IPR036737 OmpA-like domain superfamily CDA09_20685 a7cd657075bf11f15a93c1dda37a88bb 176 Gene3D G3DSA:3.30.1330.60 55 173 2.8E-33 T 01-11-2018 IPR036737 OmpA-like domain superfamily CDA09_03445 e5e9f2203a250a77f61c792f426ce177 398 Pfam PF02441 Flavoprotein 8 178 1.0E-42 T 01-11-2018 IPR003382 Flavoprotein GO:0003824 Reactome: R-HSA-196783 CDA09_03445 e5e9f2203a250a77f61c792f426ce177 398 Gene3D G3DSA:3.40.50.1950 1 184 2.0E-58 T 01-11-2018 IPR036551 Flavin prenyltransferase-like GO:0003824 Reactome: R-HSA-196783 CDA09_03445 e5e9f2203a250a77f61c792f426ce177 398 TIGRFAM TIGR00521 coaBC_dfp: phosphopantothenoylcysteine decarboxylase / phosphopantothenate--cysteine ligase 4 389 9.9E-130 T 01-11-2018 IPR005252 Coenzyme A biosynthesis bifunctional protein CoaBC GO:0004632|GO:0004633|GO:0010181|GO:0015937|GO:0015941 KEGG: 00770+4.1.1.36+6.3.2.5|MetaCyc: PWY-7851 CDA09_03445 e5e9f2203a250a77f61c792f426ce177 398 SUPERFAMILY SSF52507 3 181 3.14E-62 T 01-11-2018 IPR036551 Flavin prenyltransferase-like GO:0003824 Reactome: R-HSA-196783 CDA09_03445 e5e9f2203a250a77f61c792f426ce177 398 Gene3D G3DSA:3.40.50.10300 185 396 1.5E-69 T 01-11-2018 IPR035929 CoaB-like superfamily KEGG: 00770+6.3.2.5|Reactome: R-HSA-196783 CDA09_03445 e5e9f2203a250a77f61c792f426ce177 398 SUPERFAMILY SSF102645 184 394 1.96E-70 T 01-11-2018 IPR035929 CoaB-like superfamily KEGG: 00770+6.3.2.5|Reactome: R-HSA-196783 CDA09_03445 e5e9f2203a250a77f61c792f426ce177 398 Pfam PF04127 DNA / pantothenate metabolism flavoprotein 186 364 1.9E-64 T 01-11-2018 IPR007085 DNA/pantothenate metabolism flavoprotein, C-terminal KEGG: 00770+6.3.2.5|Reactome: R-HSA-196783 CDA09_04950 cc0e39d7526416726a9963693d714303 426 Pfam PF00069 Protein kinase domain 7 225 1.3E-44 T 01-11-2018 IPR000719 Protein kinase domain GO:0004672|GO:0005524|GO:0006468 CDA09_04950 cc0e39d7526416726a9963693d714303 426 SUPERFAMILY SSF56112 4 265 2.37E-67 T 01-11-2018 IPR011009 Protein kinase-like domain superfamily CDA09_04950 cc0e39d7526416726a9963693d714303 426 Gene3D G3DSA:1.10.510.10 92 280 1.0E-41 T 01-11-2018 CDA09_04950 cc0e39d7526416726a9963693d714303 426 SUPERFAMILY SSF51206 280 397 5.89E-25 T 01-11-2018 IPR018490 Cyclic nucleotide-binding-like CDA09_04950 cc0e39d7526416726a9963693d714303 426 PIRSF PIRSF000654 16 265 5.2E-21 T 01-11-2018 CDA09_04950 cc0e39d7526416726a9963693d714303 426 ProSitePatterns PS00107 Protein kinases ATP-binding region signature. 13 36 - T 01-11-2018 IPR017441 Protein kinase, ATP binding site GO:0005524 CDA09_04950 cc0e39d7526416726a9963693d714303 426 Gene3D G3DSA:3.30.200.20 1 90 6.3E-21 T 01-11-2018 CDA09_04950 cc0e39d7526416726a9963693d714303 426 SMART SM00100 297 412 6.6E-22 T 01-11-2018 IPR000595 Cyclic nucleotide-binding domain CDA09_04950 cc0e39d7526416726a9963693d714303 426 ProSitePatterns PS00108 Serine/Threonine protein kinases active-site signature. 130 142 - T 01-11-2018 IPR008271 Serine/threonine-protein kinase, active site GO:0004672|GO:0006468 CDA09_04950 cc0e39d7526416726a9963693d714303 426 Gene3D G3DSA:2.60.120.10 281 424 8.1E-28 T 01-11-2018 IPR014710 RmlC-like jelly roll fold CDA09_04950 cc0e39d7526416726a9963693d714303 426 SMART SM00220 7 268 4.8E-51 T 01-11-2018 IPR000719 Protein kinase domain GO:0004672|GO:0005524|GO:0006468 CDA09_04950 cc0e39d7526416726a9963693d714303 426 ProSitePatterns PS00889 Cyclic nucleotide-binding domain signature 2. 360 379 - T 01-11-2018 IPR018488 Cyclic nucleotide-binding, conserved site CDA09_04950 cc0e39d7526416726a9963693d714303 426 Pfam PF00027 Cyclic nucleotide-binding domain 317 396 2.0E-17 T 01-11-2018 IPR000595 Cyclic nucleotide-binding domain CDA09_14480 521652c586bcf854e8958545ac658ce0 457 SUPERFAMILY SSF47384 240 304 2.16E-10 T 01-11-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 CDA09_14480 521652c586bcf854e8958545ac658ce0 457 Pfam PF00512 His Kinase A (phospho-acceptor) domain 246 304 3.2E-9 T 01-11-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 CDA09_14480 521652c586bcf854e8958545ac658ce0 457 SMART SM00387 350 457 6.8E-23 T 01-11-2018 IPR003594 Histidine kinase/HSP90-like ATPase CDA09_14480 521652c586bcf854e8958545ac658ce0 457 Gene3D G3DSA:1.10.287.130 229 305 2.8E-12 T 01-11-2018 CDA09_14480 521652c586bcf854e8958545ac658ce0 457 SMART SM00388 244 308 8.8E-9 T 01-11-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 CDA09_14480 521652c586bcf854e8958545ac658ce0 457 PRINTS PR00344 Bacterial sensor protein C-terminal signature 407 417 1.2E-12 T 01-11-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 CDA09_14480 521652c586bcf854e8958545ac658ce0 457 PRINTS PR00344 Bacterial sensor protein C-terminal signature 442 455 1.2E-12 T 01-11-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 CDA09_14480 521652c586bcf854e8958545ac658ce0 457 PRINTS PR00344 Bacterial sensor protein C-terminal signature 389 403 1.2E-12 T 01-11-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 CDA09_14480 521652c586bcf854e8958545ac658ce0 457 PRINTS PR00344 Bacterial sensor protein C-terminal signature 418 436 1.2E-12 T 01-11-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 CDA09_14480 521652c586bcf854e8958545ac658ce0 457 Gene3D G3DSA:3.30.565.10 310 457 2.5E-37 T 01-11-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily CDA09_14480 521652c586bcf854e8958545ac658ce0 457 SUPERFAMILY SSF55874 298 454 1.44E-33 T 01-11-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily CDA09_14480 521652c586bcf854e8958545ac658ce0 457 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 350 454 3.6E-18 T 01-11-2018 IPR003594 Histidine kinase/HSP90-like ATPase CDA09_08870 cc37f2619e1d97e15a99bd9bf16441e0 346 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 302 313 - T 01-11-2018 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site CDA09_08870 cc37f2619e1d97e15a99bd9bf16441e0 346 Pfam PF12801 4Fe-4S binding domain 105 149 2.7E-12 T 01-11-2018 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain CDA09_08870 cc37f2619e1d97e15a99bd9bf16441e0 346 Pfam PF12801 4Fe-4S binding domain 224 252 0.0069 T 01-11-2018 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain CDA09_08870 cc37f2619e1d97e15a99bd9bf16441e0 346 SUPERFAMILY SSF54862 117 315 1.21E-7 T 01-11-2018 CDA09_11755 e7115653461c60c54e7cba24c1d60433 543 Pfam PF13193 AMP-binding enzyme C-terminal domain 450 526 5.4E-14 T 01-11-2018 IPR025110 AMP-binding enzyme, C-terminal domain CDA09_11755 e7115653461c60c54e7cba24c1d60433 543 Pfam PF00501 AMP-binding enzyme 31 441 3.2E-90 T 01-11-2018 IPR000873 AMP-dependent synthetase/ligase GO:0003824 CDA09_11755 e7115653461c60c54e7cba24c1d60433 543 Gene3D G3DSA:3.40.50.12780 5 436 7.2E-104 T 01-11-2018 CDA09_11755 e7115653461c60c54e7cba24c1d60433 543 ProSitePatterns PS00455 Putative AMP-binding domain signature. 195 206 - T 01-11-2018 IPR020845 AMP-binding, conserved site CDA09_11755 e7115653461c60c54e7cba24c1d60433 543 Gene3D G3DSA:3.30.300.310 437 541 1.9E-28 T 01-11-2018 CDA09_11755 e7115653461c60c54e7cba24c1d60433 543 SUPERFAMILY SSF56801 25 537 1.28E-136 T 01-11-2018 CDA09_11755 e7115653461c60c54e7cba24c1d60433 543 TIGRFAM TIGR03208 cyc_hxne_CoA_lg: cyclohexanecarboxylate-CoA ligase 3 534 5.5E-283 T 01-11-2018 IPR017621 Cyclohexanecarboxylate-CoA ligase CDA09_08705 fbb030802f4944d8682bef294f902b9a 453 Pfam PF00270 DEAD/DEAH box helicase 20 186 2.1E-46 T 01-11-2018 IPR011545 DEAD/DEAH box helicase domain GO:0003676|GO:0005524 CDA09_08705 fbb030802f4944d8682bef294f902b9a 453 Pfam PF03880 DbpA RNA binding domain 379 449 3.7E-21 T 01-11-2018 IPR005580 DEAD box helicase DbpA/CsdA, RNA-binding domain CDA09_08705 fbb030802f4944d8682bef294f902b9a 453 Gene3D G3DSA:3.40.50.300 204 360 2.9E-43 T 01-11-2018 CDA09_08705 fbb030802f4944d8682bef294f902b9a 453 SMART SM00490 248 329 5.6E-26 T 01-11-2018 IPR001650 Helicase, C-terminal CDA09_08705 fbb030802f4944d8682bef294f902b9a 453 SMART SM00487 15 212 5.3E-56 T 01-11-2018 IPR014001 Helicase superfamily 1/2, ATP-binding domain CDA09_08705 fbb030802f4944d8682bef294f902b9a 453 SUPERFAMILY SSF52540 65 346 4.78E-71 T 01-11-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CDA09_08705 fbb030802f4944d8682bef294f902b9a 453 Pfam PF00271 Helicase conserved C-terminal domain 227 328 2.3E-26 T 01-11-2018 IPR001650 Helicase, C-terminal CDA09_08705 fbb030802f4944d8682bef294f902b9a 453 Gene3D G3DSA:3.30.70.330 378 451 5.5E-19 T 01-11-2018 IPR012677 Nucleotide-binding alpha-beta plait domain superfamily CDA09_08705 fbb030802f4944d8682bef294f902b9a 453 Gene3D G3DSA:3.40.50.300 1 202 2.4E-72 T 01-11-2018 CDA09_08705 fbb030802f4944d8682bef294f902b9a 453 ProSitePatterns PS00039 DEAD-box subfamily ATP-dependent helicases signature. 144 152 - T 01-11-2018 IPR000629 ATP-dependent RNA helicase DEAD-box, conserved site CDA09_02590 56f91c5e49571e47f292594590f174ef 220 SUPERFAMILY SSF52799 30 195 1.28E-25 T 01-11-2018 IPR029021 Protein-tyrosine phosphatase-like CDA09_02590 56f91c5e49571e47f292594590f174ef 220 Gene3D G3DSA:3.90.190.10 28 175 3.9E-27 T 01-11-2018 IPR029021 Protein-tyrosine phosphatase-like CDA09_02590 56f91c5e49571e47f292594590f174ef 220 Pfam PF04273 Putative phosphatase (DUF442) 44 128 5.0E-7 T 01-11-2018 IPR005939 Beta-lactamase hydrolase-like GO:0016787 CDA09_04150 4184e87bb061eab0c90f7f901c240f23 327 Pfam PF02562 PhoH-like protein 105 308 1.6E-92 T 01-11-2018 IPR003714 PhoH-like protein GO:0005524 CDA09_04150 4184e87bb061eab0c90f7f901c240f23 327 SUPERFAMILY SSF52540 104 280 5.63E-38 T 01-11-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CDA09_04150 4184e87bb061eab0c90f7f901c240f23 327 Gene3D G3DSA:3.40.50.300 102 308 1.3E-71 T 01-11-2018 CDA09_06065 29e1b2584c2912c83953c8d10b12ada3 168 SUPERFAMILY SSF50447 2 92 1.77E-20 T 01-11-2018 IPR009000 Translation protein, beta-barrel domain superfamily CDA09_06065 29e1b2584c2912c83953c8d10b12ada3 168 Pfam PF05239 PRC-barrel domain 96 163 4.5E-7 T 01-11-2018 IPR027275 PRC-barrel domain CDA09_06065 29e1b2584c2912c83953c8d10b12ada3 168 Hamap MF_00014 Ribosome maturation factor RimM [rimM]. 1 168 24.309 T 01-11-2018 IPR011961 16S rRNA processing protein RimM GO:0005840|GO:0006364|GO:0043022 CDA09_06065 29e1b2584c2912c83953c8d10b12ada3 168 Pfam PF01782 RimM N-terminal domain 4 90 1.2E-26 T 01-11-2018 IPR002676 RimM, N-terminal GO:0006364 CDA09_06065 29e1b2584c2912c83953c8d10b12ada3 168 Gene3D G3DSA:2.40.30.60 1 93 6.3E-26 T 01-11-2018 IPR036976 RimM, N-terminal domain superfamily GO:0006364 CDA09_06065 29e1b2584c2912c83953c8d10b12ada3 168 TIGRFAM TIGR02273 16S_RimM: 16S rRNA processing protein RimM 1 167 6.8E-50 T 01-11-2018 IPR011961 16S rRNA processing protein RimM GO:0005840|GO:0006364|GO:0043022 CDA09_06065 29e1b2584c2912c83953c8d10b12ada3 168 Gene3D G3DSA:2.30.30.240 94 168 3.6E-27 T 01-11-2018 CDA09_06065 29e1b2584c2912c83953c8d10b12ada3 168 SUPERFAMILY SSF50346 99 168 1.12E-19 T 01-11-2018 IPR011033 PRC-barrel-like superfamily CDA09_01270 f463062ba1095b2e0f9913ea7c9bb918 289 Pfam PF12800 4Fe-4S binding domain 144 163 0.028 T 01-11-2018 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain CDA09_01270 f463062ba1095b2e0f9913ea7c9bb918 289 Pfam PF12800 4Fe-4S binding domain 191 203 0.46 T 01-11-2018 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain CDA09_01270 f463062ba1095b2e0f9913ea7c9bb918 289 TIGRFAM TIGR00397 mauM_napG: MauM/NapG family ferredoxin-type protein 17 223 7.8E-79 T 01-11-2018 IPR004494 MauM/NapG ferredoxin-type protein CDA09_01270 f463062ba1095b2e0f9913ea7c9bb918 289 Gene3D G3DSA:3.30.70.20 139 213 4.9E-8 T 01-11-2018 CDA09_01270 f463062ba1095b2e0f9913ea7c9bb918 289 Gene3D G3DSA:3.30.70.20 62 138 1.0E-10 T 01-11-2018 CDA09_01270 f463062ba1095b2e0f9913ea7c9bb918 289 Pfam PF12838 4Fe-4S dicluster domain 67 122 2.0E-6 T 01-11-2018 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain CDA09_01270 f463062ba1095b2e0f9913ea7c9bb918 289 SUPERFAMILY SSF54862 53 211 1.05E-21 T 01-11-2018 CDA09_07695 3029843398f71b35fc46e3947b547bbf 443 SUPERFAMILY SSF109604 182 347 9.67E-27 T 01-11-2018 CDA09_07695 3029843398f71b35fc46e3947b547bbf 443 SMART SM00471 182 317 0.005 T 01-11-2018 IPR003607 HD/PDEase domain CDA09_07695 3029843398f71b35fc46e3947b547bbf 443 TIGRFAM TIGR00277 HDIG: HDIG domain 184 276 3.3E-10 T 01-11-2018 IPR006675 HDIG domain CDA09_07695 3029843398f71b35fc46e3947b547bbf 443 Pfam PF01966 HD domain 188 306 2.2E-13 T 01-11-2018 IPR006674 HD domain CDA09_07695 3029843398f71b35fc46e3947b547bbf 443 Pfam PF11871 Domain of unknown function (DUF3391) 7 154 6.9E-19 T 01-11-2018 IPR021812 Protein of unknown function DUF3391 CDA09_07695 3029843398f71b35fc46e3947b547bbf 443 Gene3D G3DSA:1.10.3210.10 98 349 2.7E-47 T 01-11-2018 CDA09_15950 501deae84afadd78075c8037c7313687 299 Gene3D G3DSA:3.40.50.300 64 228 1.5E-37 T 01-11-2018 CDA09_15950 501deae84afadd78075c8037c7313687 299 SUPERFAMILY SSF50249 2 64 8.57E-5 T 01-11-2018 IPR012340 Nucleic acid-binding, OB-fold CDA09_15950 501deae84afadd78075c8037c7313687 299 Gene3D G3DSA:1.10.40.50 229 298 9.0E-23 T 01-11-2018 CDA09_15950 501deae84afadd78075c8037c7313687 299 SUPERFAMILY SSF52540 76 290 6.15E-47 T 01-11-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CDA09_15950 501deae84afadd78075c8037c7313687 299 Hamap MF_01820 Small ribosomal subunit biogenesis GTPase RsgA [rsgA]. 1 293 33.444 T 01-11-2018 IPR004881 Ribosome biogenesis GTPase RsgA GO:0003924|GO:0005525 CDA09_15950 501deae84afadd78075c8037c7313687 299 TIGRFAM TIGR00157 TIGR00157: ribosome small subunit-dependent GTPase A 41 285 3.3E-67 T 01-11-2018 IPR004881 Ribosome biogenesis GTPase RsgA GO:0003924|GO:0005525 CDA09_15950 501deae84afadd78075c8037c7313687 299 Pfam PF03193 RsgA GTPase 61 228 1.2E-47 T 01-11-2018 IPR010914 RsgA GTPase domain GO:0003924|GO:0005525 CDA09_15950 501deae84afadd78075c8037c7313687 299 Gene3D G3DSA:2.40.50.140 1 62 5.8E-8 T 01-11-2018 CDA09_07965 59014dd21472449c4ec05803654f6862 263 ProSitePatterns PS00211 ABC transporters family signature. 153 167 - T 01-11-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 CDA09_07965 59014dd21472449c4ec05803654f6862 263 SUPERFAMILY SSF52540 16 242 1.3E-64 T 01-11-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CDA09_07965 59014dd21472449c4ec05803654f6862 263 SMART SM00382 46 228 3.2E-13 T 01-11-2018 IPR003593 AAA+ ATPase domain CDA09_07965 59014dd21472449c4ec05803654f6862 263 Pfam PF00005 ABC transporter 37 180 2.2E-31 T 01-11-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 CDA09_07965 59014dd21472449c4ec05803654f6862 263 TIGRFAM TIGR03864 PQQ_ABC_ATP: ABC transporter, ATP-binding subunit, PQQ-dependent alcohol dehydrogenase system 22 255 1.3E-101 T 01-11-2018 IPR022467 ABC transporter, ATP-binding subunit, PQQ-dependent alcohol dehydrogenase system CDA09_07965 59014dd21472449c4ec05803654f6862 263 Gene3D G3DSA:3.40.50.300 15 257 2.2E-69 T 01-11-2018 CDA09_10445 3932e10f63066939a90ec2747a1dec35 268 Gene3D G3DSA:3.90.850.10 3 268 6.5E-79 T 01-11-2018 IPR036663 Fumarylacetoacetase-like, C-terminal domain superfamily GO:0003824 CDA09_10445 3932e10f63066939a90ec2747a1dec35 268 TIGRFAM TIGR03218 catechol_dmpH: 4-oxalocrotonate decarboxylase 6 267 1.1E-134 T 01-11-2018 IPR017630 4-oxalocrotonate decarboxylase KEGG: 00362+4.1.1.77|KEGG: 00621+4.1.1.77|KEGG: 00622+4.1.1.77|MetaCyc: PWY-5419|MetaCyc: PWY-5644|MetaCyc: PWY-5645|MetaCyc: PWY-5647|MetaCyc: PWY-5654|MetaCyc: PWY-6210|MetaCyc: PWY-6214|MetaCyc: PWY-6336|MetaCyc: PWY-7006|MetaCyc: PWY-7009|MetaCyc: PWY-7480 CDA09_10445 3932e10f63066939a90ec2747a1dec35 268 SUPERFAMILY SSF56529 10 268 1.68E-73 T 01-11-2018 IPR036663 Fumarylacetoacetase-like, C-terminal domain superfamily GO:0003824 CDA09_21415 9601483ec38cddca2e7fa6d723744395 274 PRINTS PR00412 Epoxide hydrolase signature 247 269 5.1E-8 T 01-11-2018 IPR000639 Epoxide hydrolase-like GO:0003824 CDA09_21415 9601483ec38cddca2e7fa6d723744395 274 PRINTS PR00412 Epoxide hydrolase signature 113 126 5.1E-8 T 01-11-2018 IPR000639 Epoxide hydrolase-like GO:0003824 CDA09_21415 9601483ec38cddca2e7fa6d723744395 274 PRINTS PR00412 Epoxide hydrolase signature 54 69 5.1E-8 T 01-11-2018 IPR000639 Epoxide hydrolase-like GO:0003824 CDA09_21415 9601483ec38cddca2e7fa6d723744395 274 PRINTS PR00111 Alpha/beta hydrolase fold signature 54 69 8.2E-26 T 01-11-2018 IPR000073 Alpha/beta hydrolase fold-1 CDA09_21415 9601483ec38cddca2e7fa6d723744395 274 PRINTS PR00111 Alpha/beta hydrolase fold signature 216 230 8.2E-26 T 01-11-2018 IPR000073 Alpha/beta hydrolase fold-1 CDA09_21415 9601483ec38cddca2e7fa6d723744395 274 PRINTS PR00111 Alpha/beta hydrolase fold signature 113 126 8.2E-26 T 01-11-2018 IPR000073 Alpha/beta hydrolase fold-1 CDA09_21415 9601483ec38cddca2e7fa6d723744395 274 PRINTS PR00111 Alpha/beta hydrolase fold signature 99 112 8.2E-26 T 01-11-2018 IPR000073 Alpha/beta hydrolase fold-1 CDA09_21415 9601483ec38cddca2e7fa6d723744395 274 SUPERFAMILY SSF53474 7 271 8.04E-62 T 01-11-2018 IPR029058 Alpha/Beta hydrolase fold CDA09_21415 9601483ec38cddca2e7fa6d723744395 274 Gene3D G3DSA:3.40.50.1820 1 274 4.6E-106 T 01-11-2018 IPR029058 Alpha/Beta hydrolase fold CDA09_21415 9601483ec38cddca2e7fa6d723744395 274 Pfam PF00561 alpha/beta hydrolase fold 27 258 3.7E-24 T 01-11-2018 IPR000073 Alpha/beta hydrolase fold-1 CDA09_03760 68312f58e7fab5782844d178bae8b29a 767 Pfam PF00390 Malic enzyme, N-terminal domain 19 151 9.4E-28 T 01-11-2018 IPR012301 Malic enzyme, N-terminal domain GO:0004471|GO:0055114 CDA09_03760 68312f58e7fab5782844d178bae8b29a 767 SUPERFAMILY SSF53659 430 757 5.76E-88 T 01-11-2018 CDA09_03760 68312f58e7fab5782844d178bae8b29a 767 SUPERFAMILY SSF51735 163 438 2.69E-85 T 01-11-2018 IPR036291 NAD(P)-binding domain superfamily CDA09_03760 68312f58e7fab5782844d178bae8b29a 767 Gene3D G3DSA:3.40.50.10950 446 753 1.7E-88 T 01-11-2018 CDA09_03760 68312f58e7fab5782844d178bae8b29a 767 Pfam PF03949 Malic enzyme, NAD binding domain 165 359 1.0E-20 T 01-11-2018 IPR012302 Malic enzyme, NAD-binding GO:0051287 CDA09_03760 68312f58e7fab5782844d178bae8b29a 767 ProSitePatterns PS00331 Malic enzymes signature. 159 175 - T 01-11-2018 IPR015884 Malic enzyme, conserved site GO:0004471|GO:0055114 CDA09_03760 68312f58e7fab5782844d178bae8b29a 767 Gene3D G3DSA:3.40.50.10380 1 160 2.3E-69 T 01-11-2018 IPR037062 Malic enzyme, N-terminal domain superfamily GO:0004471|GO:0055114 CDA09_03760 68312f58e7fab5782844d178bae8b29a 767 Gene3D G3DSA:3.40.50.720 161 434 2.8E-84 T 01-11-2018 CDA09_03760 68312f58e7fab5782844d178bae8b29a 767 SUPERFAMILY SSF53223 10 161 6.19E-52 T 01-11-2018 CDA09_03760 68312f58e7fab5782844d178bae8b29a 767 SMART SM00919 163 400 8.9E-142 T 01-11-2018 IPR012302 Malic enzyme, NAD-binding GO:0051287 CDA09_03760 68312f58e7fab5782844d178bae8b29a 767 SMART SM01274 18 151 3.8E-78 T 01-11-2018 IPR012301 Malic enzyme, N-terminal domain GO:0004471|GO:0055114 CDA09_03760 68312f58e7fab5782844d178bae8b29a 767 Gene3D G3DSA:3.40.50.10750 575 729 1.7E-88 T 01-11-2018 CDA09_03760 68312f58e7fab5782844d178bae8b29a 767 PIRSF PIRSF036684 1 761 0.0 T 01-11-2018 IPR012188 NAD(P)-dependent malic enzyme GO:0004470|GO:0006108|GO:0046872 KEGG: 00620+1.1.1.40|KEGG: 00710+1.1.1.40|MetaCyc: PWY-241|MetaCyc: PWY-7117 CDA09_03760 68312f58e7fab5782844d178bae8b29a 767 Pfam PF01515 Phosphate acetyl/butaryl transferase 430 752 9.0E-92 T 01-11-2018 IPR002505 Phosphate acetyl/butaryl transferase GO:0016746 KEGG: 00430+2.3.1.8|KEGG: 00620+2.3.1.8|KEGG: 00640+2.3.1.8|KEGG: 00680+2.3.1.8|KEGG: 00720+2.3.1.8|MetaCyc: PWY-1281|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497|MetaCyc: PWY-6637 CDA09_17400 e77c49f169a9a8810a9e1bfcc2fd3255 649 SMART SM00460 397 468 2.3E-25 T 01-11-2018 IPR002931 Transglutaminase-like CDA09_17400 e77c49f169a9a8810a9e1bfcc2fd3255 649 Pfam PF13559 Domain of unknown function (DUF4129) 575 642 4.7E-12 T 01-11-2018 IPR025403 Domain of unknown function DUF4129 CDA09_17400 e77c49f169a9a8810a9e1bfcc2fd3255 649 Gene3D G3DSA:3.10.620.30 342 482 2.5E-20 T 01-11-2018 CDA09_17400 e77c49f169a9a8810a9e1bfcc2fd3255 649 Pfam PF11992 Domain of unknown function (DUF3488) 12 322 5.7E-101 T 01-11-2018 IPR021878 Protein of unknown function DUF3488 CDA09_17400 e77c49f169a9a8810a9e1bfcc2fd3255 649 SUPERFAMILY SSF54001 271 595 7.71E-67 T 01-11-2018 IPR038765 Papain-like cysteine peptidase superfamily CDA09_17400 e77c49f169a9a8810a9e1bfcc2fd3255 649 Pfam PF01841 Transglutaminase-like superfamily 350 466 1.1E-26 T 01-11-2018 IPR002931 Transglutaminase-like CDA09_06690 fbab5172d4dd5ddcfe1b53932d4760b6 463 TIGRFAM TIGR04163 rSAM_cobopep: peptide-modifying radical SAM enzyme CbpB 21 446 6.9E-216 T 01-11-2018 IPR026423 Peptide-modifying radical SAM enzyme CbpB CDA09_06690 fbab5172d4dd5ddcfe1b53932d4760b6 463 Pfam PF13186 Iron-sulfur cluster-binding domain 332 395 7.0E-6 T 01-11-2018 IPR023885 4Fe4S-binding SPASM domain CDA09_06690 fbab5172d4dd5ddcfe1b53932d4760b6 463 Pfam PF04055 Radical SAM superfamily 86 229 3.5E-14 T 01-11-2018 IPR007197 Radical SAM GO:0003824|GO:0051536 CDA09_06690 fbab5172d4dd5ddcfe1b53932d4760b6 463 TIGRFAM TIGR04085 rSAM_more_4Fe4S: radical SAM additional 4Fe4S-binding SPASM domain 332 418 4.9E-14 T 01-11-2018 IPR023885 4Fe4S-binding SPASM domain CDA09_06690 fbab5172d4dd5ddcfe1b53932d4760b6 463 SUPERFAMILY SSF102114 78 405 1.57E-46 T 01-11-2018 CDA09_06690 fbab5172d4dd5ddcfe1b53932d4760b6 463 Gene3D G3DSA:3.20.20.70 80 441 2.6E-61 T 01-11-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 CDA09_18380 08d9a5fdce3053238fc68c213097188b 501 Pfam PF14667 Polysaccharide biosynthesis C-terminal domain 350 482 9.3E-10 T 01-11-2018 IPR029303 Polysaccharide biosynthesis protein, C-terminal domain CDA09_18380 08d9a5fdce3053238fc68c213097188b 501 Pfam PF13440 Polysaccharide biosynthesis protein 45 346 8.6E-22 T 01-11-2018 CDA09_12515 a8f89f4e8f68a013933f653a900d4a44 304 Pfam PF00892 EamA-like transporter family 157 293 7.8E-9 T 01-11-2018 IPR000620 EamA domain GO:0016020|GO:0016021 CDA09_12515 a8f89f4e8f68a013933f653a900d4a44 304 Pfam PF00892 EamA-like transporter family 10 144 1.2E-20 T 01-11-2018 IPR000620 EamA domain GO:0016020|GO:0016021 CDA09_12515 a8f89f4e8f68a013933f653a900d4a44 304 SUPERFAMILY SSF103481 49 147 1.02E-10 T 01-11-2018 CDA09_04175 dd2183d1acbca250f72e6c35eab92cad 696 Hamap MF_00255 Glycine--tRNA ligase beta subunit [glyS]. 3 693 24.321 T 01-11-2018 IPR015944 Glycine-tRNA ligase, beta subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 CDA09_04175 dd2183d1acbca250f72e6c35eab92cad 696 Pfam PF05746 DALR anticodon binding domain 588 686 1.1E-8 T 01-11-2018 IPR008909 DALR anticodon binding GO:0004814|GO:0005524|GO:0006420 CDA09_04175 dd2183d1acbca250f72e6c35eab92cad 696 SUPERFAMILY SSF109604 344 496 6.8E-17 T 01-11-2018 CDA09_04175 dd2183d1acbca250f72e6c35eab92cad 696 TIGRFAM TIGR00211 glyS: glycine--tRNA ligase, beta subunit 1 693 6.9E-210 T 01-11-2018 IPR015944 Glycine-tRNA ligase, beta subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 CDA09_04175 dd2183d1acbca250f72e6c35eab92cad 696 PRINTS PR01045 Glycyl-tRNA synthetase beta subunit signature 251 266 5.2E-32 T 01-11-2018 IPR015944 Glycine-tRNA ligase, beta subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 CDA09_04175 dd2183d1acbca250f72e6c35eab92cad 696 PRINTS PR01045 Glycyl-tRNA synthetase beta subunit signature 52 64 5.2E-32 T 01-11-2018 IPR015944 Glycine-tRNA ligase, beta subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 CDA09_04175 dd2183d1acbca250f72e6c35eab92cad 696 PRINTS PR01045 Glycyl-tRNA synthetase beta subunit signature 323 339 5.2E-32 T 01-11-2018 IPR015944 Glycine-tRNA ligase, beta subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 CDA09_04175 dd2183d1acbca250f72e6c35eab92cad 696 PRINTS PR01045 Glycyl-tRNA synthetase beta subunit signature 7 20 5.2E-32 T 01-11-2018 IPR015944 Glycine-tRNA ligase, beta subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 CDA09_04175 dd2183d1acbca250f72e6c35eab92cad 696 PRINTS PR01045 Glycyl-tRNA synthetase beta subunit signature 399 418 5.2E-32 T 01-11-2018 IPR015944 Glycine-tRNA ligase, beta subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 CDA09_04175 dd2183d1acbca250f72e6c35eab92cad 696 Pfam PF02092 Glycyl-tRNA synthetase beta subunit 6 557 3.8E-200 T 01-11-2018 IPR015944 Glycine-tRNA ligase, beta subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 CDA09_19185 e4d022123764b96d3cc57123ee9b2c60 109 TIGRFAM TIGR02684 dnstrm_HI1420: probable addiction module antidote protein 17 101 3.8E-16 T 01-11-2018 IPR014057 Uncharacterized protein HI1420 CDA09_19185 e4d022123764b96d3cc57123ee9b2c60 109 SUPERFAMILY SSF47413 49 100 2.81E-5 T 01-11-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 CDA09_14065 da3b67bcdab342255338226f53708cde 496 TIGRFAM TIGR03755 conj_TIGR03755: integrating conjugative element protein, PFL_4711 family 87 493 3.9E-123 T 01-11-2018 IPR021204 Integrating conjugative element protein, PFL4711 CDA09_18830 ec5ba38ef1d06ed389c375c9beb038a5 636 Pfam PF16448 LapD/MoxY periplasmic domain 24 144 5.2E-45 T 01-11-2018 IPR032244 LapD/MoxY, periplasmic domain CDA09_18830 ec5ba38ef1d06ed389c375c9beb038a5 636 Gene3D G3DSA:3.20.20.450 399 634 1.5E-40 T 01-11-2018 IPR035919 EAL domain superfamily CDA09_18830 ec5ba38ef1d06ed389c375c9beb038a5 636 Pfam PF00563 EAL domain 406 630 1.1E-37 T 01-11-2018 IPR001633 EAL domain CDA09_18830 ec5ba38ef1d06ed389c375c9beb038a5 636 Gene3D G3DSA:3.30.1040.50 100 149 1.9E-18 T 01-11-2018 CDA09_18830 ec5ba38ef1d06ed389c375c9beb038a5 636 SUPERFAMILY SSF141868 407 633 3.14E-40 T 01-11-2018 IPR035919 EAL domain superfamily CDA09_18830 ec5ba38ef1d06ed389c375c9beb038a5 636 Pfam PF00990 Diguanylate cyclase, GGDEF domain 235 383 1.3E-12 T 01-11-2018 IPR000160 GGDEF domain CDA09_18830 ec5ba38ef1d06ed389c375c9beb038a5 636 Gene3D G3DSA:3.30.70.270 218 389 1.5E-20 T 01-11-2018 CDA09_18830 ec5ba38ef1d06ed389c375c9beb038a5 636 SMART SM00304 170 221 0.001 T 01-11-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 CDA09_18830 ec5ba38ef1d06ed389c375c9beb038a5 636 SMART SM00267 223 389 6.1E-7 T 01-11-2018 IPR000160 GGDEF domain CDA09_18830 ec5ba38ef1d06ed389c375c9beb038a5 636 SUPERFAMILY SSF55073 240 388 4.55E-13 T 01-11-2018 IPR029787 Nucleotide cyclase CDA09_18830 ec5ba38ef1d06ed389c375c9beb038a5 636 SMART SM00052 400 634 2.7E-9 T 01-11-2018 IPR001633 EAL domain CDA09_19505 af880f2b4fb548c9e2b90a4ed390ac92 91 Hamap MF_00531 30S ribosomal protein S19 [rpsS]. 1 89 25.79 T 01-11-2018 IPR002222 Ribosomal protein S19/S15 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 CDA09_19505 af880f2b4fb548c9e2b90a4ed390ac92 91 TIGRFAM TIGR01050 rpsS_bact: ribosomal protein uS19 1 90 2.9E-45 T 01-11-2018 IPR005732 Ribosomal protein S19, bacterial-type GO:0003735|GO:0006412|GO:0015935 CDA09_19505 af880f2b4fb548c9e2b90a4ed390ac92 91 SUPERFAMILY SSF54570 3 84 9.94E-35 T 01-11-2018 IPR023575 Ribosomal protein S19, superfamily GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 CDA09_19505 af880f2b4fb548c9e2b90a4ed390ac92 91 Pfam PF00203 Ribosomal protein S19 3 83 2.2E-36 T 01-11-2018 IPR002222 Ribosomal protein S19/S15 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 CDA09_19505 af880f2b4fb548c9e2b90a4ed390ac92 91 ProSitePatterns PS00323 Ribosomal protein S19 signature. 53 77 - T 01-11-2018 IPR020934 Ribosomal protein S19 conserved site GO:0003723 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 CDA09_19505 af880f2b4fb548c9e2b90a4ed390ac92 91 PIRSF PIRSF002144 1 91 2.5E-32 T 01-11-2018 IPR002222 Ribosomal protein S19/S15 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 CDA09_19505 af880f2b4fb548c9e2b90a4ed390ac92 91 Gene3D G3DSA:3.30.860.10 1 91 3.6E-40 T 01-11-2018 IPR023575 Ribosomal protein S19, superfamily GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 CDA09_19505 af880f2b4fb548c9e2b90a4ed390ac92 91 PRINTS PR00975 Ribosomal protein S19 family signature 33 52 2.6E-23 T 01-11-2018 IPR002222 Ribosomal protein S19/S15 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 CDA09_19505 af880f2b4fb548c9e2b90a4ed390ac92 91 PRINTS PR00975 Ribosomal protein S19 family signature 53 65 2.6E-23 T 01-11-2018 IPR002222 Ribosomal protein S19/S15 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 CDA09_19505 af880f2b4fb548c9e2b90a4ed390ac92 91 PRINTS PR00975 Ribosomal protein S19 family signature 65 80 2.6E-23 T 01-11-2018 IPR002222 Ribosomal protein S19/S15 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 CDA09_04100 860ebf92a5e97ac0ce95b13cf78dfc8c 376 SUPERFAMILY SSF102114 17 309 1.18E-30 T 01-11-2018 CDA09_04100 860ebf92a5e97ac0ce95b13cf78dfc8c 376 Gene3D G3DSA:3.20.20.70 15 342 3.6E-32 T 01-11-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 CDA09_04100 860ebf92a5e97ac0ce95b13cf78dfc8c 376 Pfam PF13353 4Fe-4S single cluster domain 18 124 3.6E-5 T 01-11-2018 CDA09_04100 860ebf92a5e97ac0ce95b13cf78dfc8c 376 TIGRFAM TIGR04085 rSAM_more_4Fe4S: radical SAM additional 4Fe4S-binding SPASM domain 246 314 3.0E-7 T 01-11-2018 IPR023885 4Fe4S-binding SPASM domain CDA09_04100 860ebf92a5e97ac0ce95b13cf78dfc8c 376 Pfam PF04055 Radical SAM superfamily 21 173 9.8E-10 T 01-11-2018 IPR007197 Radical SAM GO:0003824|GO:0051536 CDA09_14995 9340a015b339c4420328b9b94a4ace71 631 ProSitePatterns PS00039 DEAD-box subfamily ATP-dependent helicases signature. 154 162 - T 01-11-2018 IPR000629 ATP-dependent RNA helicase DEAD-box, conserved site CDA09_14995 9340a015b339c4420328b9b94a4ace71 631 SUPERFAMILY SSF52540 74 362 3.68E-73 T 01-11-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CDA09_14995 9340a015b339c4420328b9b94a4ace71 631 Gene3D G3DSA:3.30.70.330 478 550 1.9E-14 T 01-11-2018 IPR012677 Nucleotide-binding alpha-beta plait domain superfamily CDA09_14995 9340a015b339c4420328b9b94a4ace71 631 Gene3D G3DSA:3.40.50.300 211 426 2.8E-51 T 01-11-2018 CDA09_14995 9340a015b339c4420328b9b94a4ace71 631 SMART SM00487 25 223 7.0E-62 T 01-11-2018 IPR014001 Helicase superfamily 1/2, ATP-binding domain CDA09_14995 9340a015b339c4420328b9b94a4ace71 631 Pfam PF03880 DbpA RNA binding domain 478 548 9.9E-23 T 01-11-2018 IPR005580 DEAD box helicase DbpA/CsdA, RNA-binding domain CDA09_14995 9340a015b339c4420328b9b94a4ace71 631 SMART SM00490 260 341 1.1E-32 T 01-11-2018 IPR001650 Helicase, C-terminal CDA09_14995 9340a015b339c4420328b9b94a4ace71 631 Hamap MF_00964 ATP-dependent RNA helicase DeaD [deaD]. 1 550 45.026 T 01-11-2018 IPR028618 ATP-dependent RNA helicase DeaD GO:0000027|GO:0004004|GO:0070417 CDA09_14995 9340a015b339c4420328b9b94a4ace71 631 Pfam PF00270 DEAD/DEAH box helicase 31 195 7.0E-47 T 01-11-2018 IPR011545 DEAD/DEAH box helicase domain GO:0003676|GO:0005524 CDA09_14995 9340a015b339c4420328b9b94a4ace71 631 Gene3D G3DSA:3.40.50.300 1 210 4.2E-75 T 01-11-2018 CDA09_14995 9340a015b339c4420328b9b94a4ace71 631 Pfam PF00271 Helicase conserved C-terminal domain 232 341 1.2E-29 T 01-11-2018 IPR001650 Helicase, C-terminal CDA09_10325 1902e367516dd0c03a1697b0b203de5f 260 Gene3D G3DSA:3.90.850.10 1 260 2.9E-86 T 01-11-2018 IPR036663 Fumarylacetoacetase-like, C-terminal domain superfamily GO:0003824 CDA09_10325 1902e367516dd0c03a1697b0b203de5f 260 TIGRFAM TIGR03220 catechol_dmpE: 2-oxopent-4-enoate hydratase 6 259 9.5E-147 T 01-11-2018 IPR017632 2-oxopent-4-enoate hydratase CDA09_10325 1902e367516dd0c03a1697b0b203de5f 260 Pfam PF01557 Fumarylacetoacetate (FAA) hydrolase family 101 258 8.4E-14 T 01-11-2018 IPR011234 Fumarylacetoacetase-like, C-terminal GO:0003824 CDA09_10325 1902e367516dd0c03a1697b0b203de5f 260 SUPERFAMILY SSF56529 1 260 6.02E-85 T 01-11-2018 IPR036663 Fumarylacetoacetase-like, C-terminal domain superfamily GO:0003824 CDA09_18975 c6286f5e57013b3c27ed0658dcc666f5 469 Gene3D G3DSA:2.20.200.10 102 350 3.3E-122 T 01-11-2018 CDA09_18975 c6286f5e57013b3c27ed0658dcc666f5 469 TIGRFAM TIGR01845 outer_NodT: efflux transporter, outer membrane factor (OMF) lipoprotein, NodT family 16 461 3.4E-101 T 01-11-2018 IPR010131 RND efflux system, outer membrane lipoprotein, NodT GO:0016020|GO:0022857|GO:0055085 CDA09_18975 c6286f5e57013b3c27ed0658dcc666f5 469 Pfam PF02321 Outer membrane efflux protein 65 252 1.5E-27 T 01-11-2018 IPR003423 Outer membrane efflux protein GO:0015562|GO:0055085 CDA09_18975 c6286f5e57013b3c27ed0658dcc666f5 469 Pfam PF02321 Outer membrane efflux protein 279 459 5.3E-22 T 01-11-2018 IPR003423 Outer membrane efflux protein GO:0015562|GO:0055085 CDA09_18975 c6286f5e57013b3c27ed0658dcc666f5 469 Gene3D G3DSA:1.20.1600.10 55 462 3.3E-122 T 01-11-2018 CDA09_18975 c6286f5e57013b3c27ed0658dcc666f5 469 SUPERFAMILY SSF56954 6 465 1.05E-101 T 01-11-2018 CDA09_18310 2f16e4daca75953211901e624dfec498 130 Gene3D G3DSA:1.10.3830.10 14 130 1.6E-37 T 01-11-2018 IPR036945 Diacylglycerol kinase (DAGK) superfamily GO:0008610|GO:0016020|GO:0016301 KEGG: 00561+2.7.1.107|KEGG: 00564+2.7.1.107|KEGG: 04070+2.7.1.107|MetaCyc: PWY-7039|MetaCyc: PWY-7817 CDA09_18310 2f16e4daca75953211901e624dfec498 130 Pfam PF01219 Prokaryotic diacylglycerol kinase 27 128 1.1E-33 T 01-11-2018 IPR000829 DAGK family GO:0008654|GO:0016020|GO:0016301 KEGG: 00561+2.7.1.107|KEGG: 00564+2.7.1.107|KEGG: 04070+2.7.1.107|MetaCyc: PWY-7039|MetaCyc: PWY-7817 CDA09_18310 2f16e4daca75953211901e624dfec498 130 ProSitePatterns PS01069 Prokaryotic diacylglycerol kinase signature. 81 92 - T 01-11-2018 IPR000829 DAGK family GO:0008654|GO:0016020|GO:0016301 KEGG: 00561+2.7.1.107|KEGG: 00564+2.7.1.107|KEGG: 04070+2.7.1.107|MetaCyc: PWY-7039|MetaCyc: PWY-7817 CDA09_21325 9292ca07fa2762cf314e37f04eb9ce41 239 TIGRFAM TIGR01966 RNasePH: ribonuclease PH 2 236 9.9E-117 T 01-11-2018 IPR002381 Ribonuclease PH, bacterial-type GO:0000049|GO:0008033|GO:0009022 CDA09_21325 9292ca07fa2762cf314e37f04eb9ce41 239 Pfam PF03725 3' exoribonuclease family, domain 2 158 222 1.6E-8 T 01-11-2018 IPR015847 Exoribonuclease, phosphorolytic domain 2 Reactome: R-HSA-380994|Reactome: R-HSA-429958|Reactome: R-HSA-450385|Reactome: R-HSA-450513|Reactome: R-HSA-450604|Reactome: R-HSA-6791226 CDA09_21325 9292ca07fa2762cf314e37f04eb9ce41 239 SUPERFAMILY SSF54211 1 181 1.92E-45 T 01-11-2018 IPR020568 Ribosomal protein S5 domain 2-type fold CDA09_21325 9292ca07fa2762cf314e37f04eb9ce41 239 Hamap MF_00564 Ribonuclease PH [rph]. 11 237 45.567 T 01-11-2018 IPR002381 Ribonuclease PH, bacterial-type GO:0000049|GO:0008033|GO:0009022 CDA09_21325 9292ca07fa2762cf314e37f04eb9ce41 239 SUPERFAMILY SSF55666 152 237 7.59E-26 T 01-11-2018 IPR036345 Exoribonuclease, PH domain 2 superfamily Reactome: R-HSA-380994|Reactome: R-HSA-429958|Reactome: R-HSA-450385|Reactome: R-HSA-450513|Reactome: R-HSA-450604|Reactome: R-HSA-6791226 CDA09_21325 9292ca07fa2762cf314e37f04eb9ce41 239 Gene3D G3DSA:3.30.230.70 9 238 2.7E-61 T 01-11-2018 IPR027408 PNPase/RNase PH domain superfamily Reactome: R-HSA-380994|Reactome: R-HSA-429958|Reactome: R-HSA-450385|Reactome: R-HSA-450513|Reactome: R-HSA-450604|Reactome: R-HSA-6791226 CDA09_21325 9292ca07fa2762cf314e37f04eb9ce41 239 ProSitePatterns PS01277 Ribonuclease PH signature. 116 128 - T 01-11-2018 IPR018336 Ribonuclease PH, conserved site CDA09_21325 9292ca07fa2762cf314e37f04eb9ce41 239 Pfam PF01138 3' exoribonuclease family, domain 1 10 140 1.5E-20 T 01-11-2018 IPR001247 Exoribonuclease, phosphorolytic domain 1 Reactome: R-HSA-380994|Reactome: R-HSA-429958|Reactome: R-HSA-450385|Reactome: R-HSA-450513|Reactome: R-HSA-450604|Reactome: R-HSA-6791226 CDA09_07880 ef4df3adf4bdd762f18046c8c7641b4e 258 SMART SM00382 32 230 9.1E-13 T 01-11-2018 IPR003593 AAA+ ATPase domain CDA09_07880 ef4df3adf4bdd762f18046c8c7641b4e 258 Pfam PF00005 ABC transporter 23 182 2.4E-32 T 01-11-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 CDA09_07880 ef4df3adf4bdd762f18046c8c7641b4e 258 PIRSF PIRSF039085 4 258 6.8E-118 T 01-11-2018 IPR030679 ABC-type amino acid transport system, ATPase component, HisP-type GO:0003333|GO:0015424 CDA09_07880 ef4df3adf4bdd762f18046c8c7641b4e 258 Gene3D G3DSA:3.40.50.300 4 258 5.1E-79 T 01-11-2018 CDA09_07880 ef4df3adf4bdd762f18046c8c7641b4e 258 SUPERFAMILY SSF52540 8 252 2.08E-75 T 01-11-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CDA09_07880 ef4df3adf4bdd762f18046c8c7641b4e 258 ProSitePatterns PS00211 ABC transporters family signature. 154 168 - T 01-11-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 CDA09_11100 cb33b8f0a91ca86d5d7818a3c2a1037e 301 Gene3D G3DSA:3.40.50.10860 8 280 2.9E-106 T 01-11-2018 CDA09_11100 cb33b8f0a91ca86d5d7818a3c2a1037e 301 Pfam PF00763 Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain 5 121 2.6E-37 T 01-11-2018 IPR020630 Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain GO:0004488|GO:0055114 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|MetaCyc: PWY-7909|Reactome: R-HSA-196757 CDA09_11100 cb33b8f0a91ca86d5d7818a3c2a1037e 301 SUPERFAMILY SSF53223 1 122 1.06E-37 T 01-11-2018 CDA09_11100 cb33b8f0a91ca86d5d7818a3c2a1037e 301 Pfam PF02882 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain 124 286 4.4E-68 T 01-11-2018 IPR020631 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain GO:0004488 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|MetaCyc: PWY-7909|Reactome: R-HSA-196757 CDA09_11100 cb33b8f0a91ca86d5d7818a3c2a1037e 301 SUPERFAMILY SSF51735 123 286 2.62E-52 T 01-11-2018 IPR036291 NAD(P)-binding domain superfamily CDA09_11100 cb33b8f0a91ca86d5d7818a3c2a1037e 301 Gene3D G3DSA:3.40.50.720 6 263 2.9E-106 T 01-11-2018 CDA09_11100 cb33b8f0a91ca86d5d7818a3c2a1037e 301 ProSitePatterns PS00766 Tetrahydrofolate dehydrogenase/cyclohydrolase signature 1. 76 101 - T 01-11-2018 IPR020867 Tetrahydrofolate dehydrogenase/cyclohydrolase, conserved site GO:0003824|GO:0055114 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|MetaCyc: PWY-7909|Reactome: R-HSA-196757 CDA09_11100 cb33b8f0a91ca86d5d7818a3c2a1037e 301 Hamap MF_01576 Bifunctional protein FolD [folD]. 3 287 38.542 T 01-11-2018 IPR000672 Tetrahydrofolate dehydrogenase/cyclohydrolase GO:0004488|GO:0055114 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|MetaCyc: PWY-7909|Reactome: R-HSA-196757 CDA09_11100 cb33b8f0a91ca86d5d7818a3c2a1037e 301 ProSitePatterns PS00767 Tetrahydrofolate dehydrogenase/cyclohydrolase signature 2. 264 272 - T 01-11-2018 IPR020867 Tetrahydrofolate dehydrogenase/cyclohydrolase, conserved site GO:0003824|GO:0055114 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|MetaCyc: PWY-7909|Reactome: R-HSA-196757 CDA09_11100 cb33b8f0a91ca86d5d7818a3c2a1037e 301 PRINTS PR00085 Tetrahydrofolate dehydrogenase/cyclohydrolase family signature 75 102 4.6E-84 T 01-11-2018 IPR000672 Tetrahydrofolate dehydrogenase/cyclohydrolase GO:0004488|GO:0055114 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|MetaCyc: PWY-7909|Reactome: R-HSA-196757 CDA09_11100 cb33b8f0a91ca86d5d7818a3c2a1037e 301 PRINTS PR00085 Tetrahydrofolate dehydrogenase/cyclohydrolase family signature 34 56 4.6E-84 T 01-11-2018 IPR000672 Tetrahydrofolate dehydrogenase/cyclohydrolase GO:0004488|GO:0055114 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|MetaCyc: PWY-7909|Reactome: R-HSA-196757 CDA09_11100 cb33b8f0a91ca86d5d7818a3c2a1037e 301 PRINTS PR00085 Tetrahydrofolate dehydrogenase/cyclohydrolase family signature 110 131 4.6E-84 T 01-11-2018 IPR000672 Tetrahydrofolate dehydrogenase/cyclohydrolase GO:0004488|GO:0055114 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|MetaCyc: PWY-7909|Reactome: R-HSA-196757 CDA09_11100 cb33b8f0a91ca86d5d7818a3c2a1037e 301 PRINTS PR00085 Tetrahydrofolate dehydrogenase/cyclohydrolase family signature 204 233 4.6E-84 T 01-11-2018 IPR000672 Tetrahydrofolate dehydrogenase/cyclohydrolase GO:0004488|GO:0055114 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|MetaCyc: PWY-7909|Reactome: R-HSA-196757 CDA09_11100 cb33b8f0a91ca86d5d7818a3c2a1037e 301 PRINTS PR00085 Tetrahydrofolate dehydrogenase/cyclohydrolase family signature 260 278 4.6E-84 T 01-11-2018 IPR000672 Tetrahydrofolate dehydrogenase/cyclohydrolase GO:0004488|GO:0055114 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|MetaCyc: PWY-7909|Reactome: R-HSA-196757 CDA09_11100 cb33b8f0a91ca86d5d7818a3c2a1037e 301 PRINTS PR00085 Tetrahydrofolate dehydrogenase/cyclohydrolase family signature 243 259 4.6E-84 T 01-11-2018 IPR000672 Tetrahydrofolate dehydrogenase/cyclohydrolase GO:0004488|GO:0055114 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|MetaCyc: PWY-7909|Reactome: R-HSA-196757 CDA09_11100 cb33b8f0a91ca86d5d7818a3c2a1037e 301 PRINTS PR00085 Tetrahydrofolate dehydrogenase/cyclohydrolase family signature 155 175 4.6E-84 T 01-11-2018 IPR000672 Tetrahydrofolate dehydrogenase/cyclohydrolase GO:0004488|GO:0055114 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|MetaCyc: PWY-7909|Reactome: R-HSA-196757 CDA09_12840 d430044a2fa6dac36ea4eb5ff8838a26 165 ProSitePatterns PS01350 2C-methyl-D-erythritol 2,4-cyclodiphosphate synthase signature. 39 54 - T 01-11-2018 IPR020555 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase, conserved site GO:0008685 KEGG: 00900+4.6.1.12|MetaCyc: PWY-7560 CDA09_12840 d430044a2fa6dac36ea4eb5ff8838a26 165 SUPERFAMILY SSF69765 4 160 6.28E-64 T 01-11-2018 IPR036571 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase superfamily GO:0008685|GO:0016114 KEGG: 00900+4.6.1.12|MetaCyc: PWY-7560 CDA09_12840 d430044a2fa6dac36ea4eb5ff8838a26 165 Gene3D G3DSA:3.30.1330.50 3 165 2.2E-67 T 01-11-2018 IPR036571 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase superfamily GO:0008685|GO:0016114 KEGG: 00900+4.6.1.12|MetaCyc: PWY-7560 CDA09_12840 d430044a2fa6dac36ea4eb5ff8838a26 165 TIGRFAM TIGR00151 ispF: 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase 6 160 1.5E-64 T 01-11-2018 IPR003526 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase GO:0008685|GO:0016114 KEGG: 00900+4.6.1.12|MetaCyc: PWY-7560 CDA09_12840 d430044a2fa6dac36ea4eb5ff8838a26 165 Hamap MF_00107 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase [ispF]. 5 160 35.558 T 01-11-2018 IPR003526 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase GO:0008685|GO:0016114 KEGG: 00900+4.6.1.12|MetaCyc: PWY-7560 CDA09_12840 d430044a2fa6dac36ea4eb5ff8838a26 165 Pfam PF02542 YgbB family 5 158 1.5E-62 T 01-11-2018 IPR003526 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase GO:0008685|GO:0016114 KEGG: 00900+4.6.1.12|MetaCyc: PWY-7560 CDA09_08150 6a443a24a996f78f2ca3f6e185a9859c 146 SUPERFAMILY SSF102400 4 139 1.1E-36 T 01-11-2018 IPR036768 DNA polymerase III subunit chi superfamily CDA09_08150 6a443a24a996f78f2ca3f6e185a9859c 146 Gene3D G3DSA:3.40.50.10110 2 139 2.7E-37 T 01-11-2018 IPR036768 DNA polymerase III subunit chi superfamily CDA09_08150 6a443a24a996f78f2ca3f6e185a9859c 146 Pfam PF04364 DNA polymerase III chi subunit, HolC 4 135 2.1E-35 T 01-11-2018 IPR007459 DNA polymerase III chi subunit, HolC GO:0003677|GO:0003887|GO:0006260 CDA09_05995 5a7f7f4a21ef7125ad1e8fd599269356 98 Gene3D G3DSA:3.30.70.2340 1 98 9.8E-34 T 01-11-2018 CDA09_05995 5a7f7f4a21ef7125ad1e8fd599269356 98 Pfam PF12112 Protein of unknown function (DUF3579) 5 87 1.7E-34 T 01-11-2018 IPR021969 Protein of unknown function DUF3579 CDA09_02890 b5114c517c5c7a207b1e53028f4a2081 302 ProSitePatterns PS00018 EF-hand calcium-binding domain. 211 223 - T 01-11-2018 IPR018247 EF-Hand 1, calcium-binding site CDA09_13405 8079ba38cff078d1cc41107034c495b8 257 Gene3D G3DSA:3.40.47.10 12 166 1.2E-5 T 01-11-2018 IPR016039 Thiolase-like GO:0003824 CDA09_13405 8079ba38cff078d1cc41107034c495b8 257 Pfam PF13723 Beta-ketoacyl synthase, N-terminal domain 28 207 1.5E-27 T 01-11-2018 IPR014030 Beta-ketoacyl synthase, N-terminal CDA09_13405 8079ba38cff078d1cc41107034c495b8 257 SUPERFAMILY SSF53901 5 159 2.15E-10 T 01-11-2018 IPR016039 Thiolase-like GO:0003824 CDA09_18730 7428a13de946194135b1782babb76a36 188 SUPERFAMILY SSF143456 6 188 2.75E-64 T 01-11-2018 CDA09_18730 7428a13de946194135b1782babb76a36 188 Hamap MF_00758 UPF0301 protein YqgE [yqgE]. 6 188 36.933 T 01-11-2018 IPR003774 Protein of unknown function UPF0301 CDA09_18730 7428a13de946194135b1782babb76a36 188 Gene3D G3DSA:3.40.1740.10 4 188 1.5E-67 T 01-11-2018 CDA09_18730 7428a13de946194135b1782babb76a36 188 Pfam PF02622 Uncharacterized ACR, COG1678 17 175 1.2E-47 T 01-11-2018 IPR003774 Protein of unknown function UPF0301 CDA09_00530 51fc0deb6b2103a35e467c1c12842dad 439 Pfam PF11808 Domain of unknown function (DUF3329) 2 82 1.9E-11 T 01-11-2018 IPR021766 Phosphate regulon sensor protein PhoR GO:0000155|GO:0000160|GO:0004721 CDA09_00530 51fc0deb6b2103a35e467c1c12842dad 439 Pfam PF13188 PAS domain 92 145 1.8E-4 T 01-11-2018 IPR000014 PAS domain CDA09_00530 51fc0deb6b2103a35e467c1c12842dad 439 SMART SM00388 202 270 2.5E-21 T 01-11-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 CDA09_00530 51fc0deb6b2103a35e467c1c12842dad 439 Gene3D G3DSA:3.30.565.10 277 431 1.4E-36 T 01-11-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily CDA09_00530 51fc0deb6b2103a35e467c1c12842dad 439 TIGRFAM TIGR02966 phoR_proteo: phosphate regulon sensor kinase PhoR 92 425 1.4E-122 T 01-11-2018 IPR014310 Signal transduction histidine kinase, phosphate regulon sensor PhoR GO:0000155|GO:0000160|GO:0004673|GO:0016021 CDA09_00530 51fc0deb6b2103a35e467c1c12842dad 439 SUPERFAMILY SSF47384 190 270 1.37E-20 T 01-11-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 CDA09_00530 51fc0deb6b2103a35e467c1c12842dad 439 PRINTS PR00344 Bacterial sensor protein C-terminal signature 354 368 7.1E-14 T 01-11-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 CDA09_00530 51fc0deb6b2103a35e467c1c12842dad 439 PRINTS PR00344 Bacterial sensor protein C-terminal signature 413 426 7.1E-14 T 01-11-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 CDA09_00530 51fc0deb6b2103a35e467c1c12842dad 439 PRINTS PR00344 Bacterial sensor protein C-terminal signature 372 382 7.1E-14 T 01-11-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 CDA09_00530 51fc0deb6b2103a35e467c1c12842dad 439 PRINTS PR00344 Bacterial sensor protein C-terminal signature 389 407 7.1E-14 T 01-11-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 CDA09_00530 51fc0deb6b2103a35e467c1c12842dad 439 SMART SM00387 317 429 4.5E-36 T 01-11-2018 IPR003594 Histidine kinase/HSP90-like ATPase CDA09_00530 51fc0deb6b2103a35e467c1c12842dad 439 Pfam PF00512 His Kinase A (phospho-acceptor) domain 202 270 3.7E-18 T 01-11-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 CDA09_00530 51fc0deb6b2103a35e467c1c12842dad 439 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 319 427 3.2E-22 T 01-11-2018 IPR003594 Histidine kinase/HSP90-like ATPase CDA09_00530 51fc0deb6b2103a35e467c1c12842dad 439 Gene3D G3DSA:1.10.287.130 199 269 3.7E-23 T 01-11-2018 CDA09_00530 51fc0deb6b2103a35e467c1c12842dad 439 SUPERFAMILY SSF55785 87 185 4.71E-6 T 01-11-2018 IPR035965 PAS domain superfamily CDA09_00530 51fc0deb6b2103a35e467c1c12842dad 439 SUPERFAMILY SSF55874 259 427 6.42E-41 T 01-11-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily CDA09_00530 51fc0deb6b2103a35e467c1c12842dad 439 Gene3D G3DSA:3.30.450.20 85 198 2.2E-6 T 01-11-2018 CDA09_08125 20ceb751a815973a9c313c5c365e77c5 164 TIGRFAM TIGR00581 moaC: molybdenum cofactor biosynthesis protein C 9 157 2.6E-61 T 01-11-2018 IPR023045 Molybdenum cofactor biosynthesis C GO:0006777 KEGG: 00790+4.6.1.17|MetaCyc: PWY-6823|Reactome: R-HSA-947581 CDA09_08125 20ceb751a815973a9c313c5c365e77c5 164 SUPERFAMILY SSF55040 16 160 2.09E-60 T 01-11-2018 IPR036522 Molybdopterin cofactor biosynthesis C (MoaC) domain superfamily GO:0006777 KEGG: 00790+4.6.1.17|MetaCyc: PWY-6823|Reactome: R-HSA-947581 CDA09_08125 20ceb751a815973a9c313c5c365e77c5 164 Gene3D G3DSA:3.30.70.640 7 164 7.8E-68 T 01-11-2018 IPR036522 Molybdopterin cofactor biosynthesis C (MoaC) domain superfamily GO:0006777 KEGG: 00790+4.6.1.17|MetaCyc: PWY-6823|Reactome: R-HSA-947581 CDA09_08125 20ceb751a815973a9c313c5c365e77c5 164 Pfam PF01967 MoaC family 20 155 5.5E-54 T 01-11-2018 IPR002820 Molybdopterin cofactor biosynthesis C (MoaC) domain GO:0006777 KEGG: 00790+4.6.1.17|MetaCyc: PWY-6823|Reactome: R-HSA-947581 CDA09_08125 20ceb751a815973a9c313c5c365e77c5 164 Hamap MF_01224_B Cyclic pyranopterin monophosphate synthase [moaC]. 7 163 36.065 T 01-11-2018 IPR023045 Molybdenum cofactor biosynthesis C GO:0006777 KEGG: 00790+4.6.1.17|MetaCyc: PWY-6823|Reactome: R-HSA-947581 CDA09_02355 003505a2877cd529bcd20f8d7177482e 506 Gene3D G3DSA:3.40.50.300 201 368 6.6E-22 T 01-11-2018 CDA09_02355 003505a2877cd529bcd20f8d7177482e 506 Pfam PF05872 Bacterial protein of unknown function (DUF853) 4 506 2.7E-243 T 01-11-2018 IPR033186 Helicase HerA-like C-terminal CDA09_02355 003505a2877cd529bcd20f8d7177482e 506 SUPERFAMILY SSF52540 13 369 2.67E-54 T 01-11-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CDA09_02355 003505a2877cd529bcd20f8d7177482e 506 Gene3D G3DSA:3.40.50.300 4 131 9.6E-10 T 01-11-2018 CDA09_05010 3471b6e37f71817e2875dbc21d5a7f91 340 Hamap MF_02042 tRNA-dihydrouridine synthase B [dusB]. 1 322 49.204 T 01-11-2018 IPR032887 tRNA-dihydrouridine synthase B GO:0002943|GO:0017150 CDA09_05010 3471b6e37f71817e2875dbc21d5a7f91 340 Gene3D G3DSA:1.10.1200.80 253 327 3.7E-14 T 01-11-2018 IPR024036 tRNA-dihydrouridine synthase, putative, C-terminal GO:0016491|GO:0055114 CDA09_05010 3471b6e37f71817e2875dbc21d5a7f91 340 Gene3D G3DSA:3.20.20.70 7 250 9.6E-80 T 01-11-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 CDA09_05010 3471b6e37f71817e2875dbc21d5a7f91 340 ProSitePatterns PS01136 Uncharacterized protein family UPF0034 signature. 94 112 - T 01-11-2018 IPR018517 tRNA-dihydrouridine synthase, conserved site GO:0008033|GO:0017150|GO:0050660|GO:0055114 CDA09_05010 3471b6e37f71817e2875dbc21d5a7f91 340 PIRSF PIRSF006621 1 328 1.4E-107 T 01-11-2018 IPR001269 tRNA-dihydrouridine synthase GO:0008033|GO:0017150|GO:0050660|GO:0055114 CDA09_05010 3471b6e37f71817e2875dbc21d5a7f91 340 Pfam PF01207 Dihydrouridine synthase (Dus) 14 315 7.4E-107 T 01-11-2018 IPR001269 tRNA-dihydrouridine synthase GO:0008033|GO:0017150|GO:0050660|GO:0055114 CDA09_05010 3471b6e37f71817e2875dbc21d5a7f91 340 SUPERFAMILY SSF51395 10 319 8.79E-90 T 01-11-2018 CDA09_05010 3471b6e37f71817e2875dbc21d5a7f91 340 TIGRFAM TIGR00737 nifR3_yhdG: putative TIM-barrel protein, nifR3 family 6 320 5.2E-123 T 01-11-2018 IPR004652 tRNA-dihydrouridine synthase, TIM-barrel, NifR3 GO:0008033|GO:0016491|GO:0050660|GO:0055114 CDA09_14170 970ed8fa4e011415b870580f9a511e34 810 Gene3D G3DSA:3.40.50.300 347 568 6.4E-56 T 01-11-2018 CDA09_14170 970ed8fa4e011415b870580f9a511e34 810 Pfam PF13588 Type I restriction enzyme R protein N terminus (HSDR_N) 58 118 7.3E-7 T 01-11-2018 IPR029464 Type I restriction enzyme R protein, N-terminal domain CDA09_14170 970ed8fa4e011415b870580f9a511e34 810 SUPERFAMILY SSF52540 276 530 1.16E-13 T 01-11-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CDA09_14170 970ed8fa4e011415b870580f9a511e34 810 Gene3D G3DSA:3.90.1570.30 1 147 1.3E-47 T 01-11-2018 CDA09_14170 970ed8fa4e011415b870580f9a511e34 810 Pfam PF00271 Helicase conserved C-terminal domain 417 528 2.5E-4 T 01-11-2018 IPR001650 Helicase, C-terminal CDA09_14170 970ed8fa4e011415b870580f9a511e34 810 Pfam PF08463 EcoEI R protein C-terminal 649 802 2.3E-25 T 01-11-2018 IPR013670 EcoEI R protein C-terminal domain GO:0003677|GO:0003824|GO:0006304 CDA09_14170 970ed8fa4e011415b870580f9a511e34 810 SUPERFAMILY SSF52540 135 369 2.88E-38 T 01-11-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CDA09_14170 970ed8fa4e011415b870580f9a511e34 810 SMART SM00487 169 364 6.1E-21 T 01-11-2018 IPR014001 Helicase superfamily 1/2, ATP-binding domain CDA09_14170 970ed8fa4e011415b870580f9a511e34 810 Gene3D G3DSA:3.40.50.300 153 346 1.4E-75 T 01-11-2018 CDA09_14170 970ed8fa4e011415b870580f9a511e34 810 Pfam PF04851 Type III restriction enzyme, res subunit 171 329 1.6E-40 T 01-11-2018 IPR006935 Helicase/UvrB, N-terminal GO:0003677|GO:0005524|GO:0016787 CDA09_01605 a4d3b3dce9b0a5a71ee83d61a000be30 544 Gene3D G3DSA:3.40.720.10 169 465 2.6E-34 T 01-11-2018 IPR017849 Alkaline phosphatase-like, alpha/beta/alpha GO:0003824 CDA09_01605 a4d3b3dce9b0a5a71ee83d61a000be30 544 Pfam PF00884 Sulfatase 177 461 1.4E-16 T 01-11-2018 IPR000917 Sulfatase, N-terminal GO:0008484 CDA09_01605 a4d3b3dce9b0a5a71ee83d61a000be30 544 SUPERFAMILY SSF53649 175 508 3.27E-31 T 01-11-2018 IPR017850 Alkaline-phosphatase-like, core domain superfamily GO:0003824 CDA09_14460 3519f8a2efad051e5a1b5e2094183c0c 203 Pfam PF13472 GDSL-like Lipase/Acylhydrolase family 28 185 1.2E-27 T 01-11-2018 IPR013830 SGNH hydrolase-type esterase domain CDA09_14460 3519f8a2efad051e5a1b5e2094183c0c 203 Gene3D G3DSA:3.40.50.1110 22 203 4.5E-68 T 01-11-2018 IPR036514 SGNH hydrolase superfamily CDA09_14460 3519f8a2efad051e5a1b5e2094183c0c 203 SUPERFAMILY SSF52266 23 201 6.26E-49 T 01-11-2018 CDA09_02565 36bb565d0a0ebc2e9b406678e940e1fc 510 Pfam PF13231 Dolichyl-phosphate-mannose-protein mannosyltransferase 63 230 3.6E-31 T 01-11-2018 IPR038731 Glycosyltransferase RgtA/B/C/D-like CDA09_06370 8449bc63e7884446c94d0aceb8cbed18 375 Gene3D G3DSA:3.30.590.20 1 372 8.2E-101 T 01-11-2018 CDA09_06370 8449bc63e7884446c94d0aceb8cbed18 375 TIGRFAM TIGR02050 gshA_cyan_rel: carboxylate-amine ligase, YbdK family 14 297 1.8E-102 T 01-11-2018 IPR011793 Putative glutamate--cysteine ligase YbdK GO:0016879 KEGG: 00270+6.3.2.2|KEGG: 00480+6.3.2.2|MetaCyc: PWY-6840|MetaCyc: PWY-7255 CDA09_06370 8449bc63e7884446c94d0aceb8cbed18 375 SUPERFAMILY SSF55931 5 369 1.5E-108 T 01-11-2018 IPR014746 Glutamine synthetase/guanido kinase, catalytic domain GO:0003824 CDA09_06370 8449bc63e7884446c94d0aceb8cbed18 375 Pfam PF04107 Glutamate-cysteine ligase family 2(GCS2) 14 289 6.2E-57 T 01-11-2018 IPR006336 Glutamate--cysteine ligase, GCS2 GO:0004357|GO:0042398 KEGG: 00270+6.3.2.2|KEGG: 00480+6.3.2.2|MetaCyc: PWY-6840|MetaCyc: PWY-7255 CDA09_06370 8449bc63e7884446c94d0aceb8cbed18 375 Hamap MF_01609 Glutamate--cysteine ligase [gshA]. 1 375 98.869 T 01-11-2018 IPR011793 Putative glutamate--cysteine ligase YbdK GO:0016879 KEGG: 00270+6.3.2.2|KEGG: 00480+6.3.2.2|MetaCyc: PWY-6840|MetaCyc: PWY-7255 CDA09_11400 cbd385365a677758b5e46b5816d12e47 477 SUPERFAMILY SSF55874 289 452 3.27E-38 T 01-11-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily CDA09_11400 cbd385365a677758b5e46b5816d12e47 477 Gene3D G3DSA:1.10.287.130 183 299 2.2E-20 T 01-11-2018 CDA09_11400 cbd385365a677758b5e46b5816d12e47 477 SUPERFAMILY SSF158472 179 231 1.31E-8 T 01-11-2018 CDA09_11400 cbd385365a677758b5e46b5816d12e47 477 SMART SM00304 179 232 5.1E-11 T 01-11-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 CDA09_11400 cbd385365a677758b5e46b5816d12e47 477 Gene3D G3DSA:3.30.565.10 304 452 2.6E-31 T 01-11-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily CDA09_11400 cbd385365a677758b5e46b5816d12e47 477 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 350 449 1.6E-13 T 01-11-2018 IPR003594 Histidine kinase/HSP90-like ATPase CDA09_11400 cbd385365a677758b5e46b5816d12e47 477 SMART SM00388 233 299 4.9E-5 T 01-11-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 CDA09_11400 cbd385365a677758b5e46b5816d12e47 477 Pfam PF00672 HAMP domain 183 229 7.9E-7 T 01-11-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 CDA09_11400 cbd385365a677758b5e46b5816d12e47 477 SMART SM00387 344 451 3.7E-29 T 01-11-2018 IPR003594 Histidine kinase/HSP90-like ATPase CDA09_11400 cbd385365a677758b5e46b5816d12e47 477 PRINTS PR00344 Bacterial sensor protein C-terminal signature 381 395 4.1E-8 T 01-11-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 CDA09_11400 cbd385365a677758b5e46b5816d12e47 477 PRINTS PR00344 Bacterial sensor protein C-terminal signature 399 409 4.1E-8 T 01-11-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 CDA09_11400 cbd385365a677758b5e46b5816d12e47 477 PRINTS PR00344 Bacterial sensor protein C-terminal signature 412 430 4.1E-8 T 01-11-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 CDA09_11400 cbd385365a677758b5e46b5816d12e47 477 SUPERFAMILY SSF47384 216 299 3.14E-11 T 01-11-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 CDA09_20020 daf8dfd02c6cc1a80cc190a3e674f449 450 Pfam PF00437 Type II/IV secretion system protein 97 373 1.8E-82 T 01-11-2018 IPR001482 Type II/IV secretion system protein CDA09_20020 daf8dfd02c6cc1a80cc190a3e674f449 450 Gene3D G3DSA:3.40.50.300 194 422 3.6E-71 T 01-11-2018 CDA09_20020 daf8dfd02c6cc1a80cc190a3e674f449 450 Gene3D G3DSA:3.30.450.380 19 192 1.9E-47 T 01-11-2018 CDA09_20020 daf8dfd02c6cc1a80cc190a3e674f449 450 SUPERFAMILY SSF52540 78 409 4.68E-66 T 01-11-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CDA09_05735 0efc89ecc7e177794b93bc77c738221a 133 SMART SM00448 6 120 2.7E-35 T 01-11-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 CDA09_05735 0efc89ecc7e177794b93bc77c738221a 133 Gene3D G3DSA:3.40.50.2300 1 132 9.2E-39 T 01-11-2018 CDA09_05735 0efc89ecc7e177794b93bc77c738221a 133 SUPERFAMILY SSF52172 5 126 5.98E-37 T 01-11-2018 IPR011006 CheY-like superfamily CDA09_05735 0efc89ecc7e177794b93bc77c738221a 133 Pfam PF00072 Response regulator receiver domain 9 120 3.3E-32 T 01-11-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 CDA09_22015 28848fcea69de537fdd09d02f14438f4 326 Pfam PF14870 Photosynthesis system II assembly factor YCF48 157 243 2.7E-13 T 01-11-2018 IPR028203 Photosynthesis system II assembly factor Ycf48/Hcf136-like domain CDA09_22015 28848fcea69de537fdd09d02f14438f4 326 SUPERFAMILY SSF110296 49 280 3.66E-30 T 01-11-2018 CDA09_22015 28848fcea69de537fdd09d02f14438f4 326 Gene3D G3DSA:2.130.10.10 35 160 5.3E-6 T 01-11-2018 IPR015943 WD40/YVTN repeat-like-containing domain superfamily GO:0005515 CDA09_22015 28848fcea69de537fdd09d02f14438f4 326 Gene3D G3DSA:2.130.10.10 172 264 7.2E-6 T 01-11-2018 IPR015943 WD40/YVTN repeat-like-containing domain superfamily GO:0005515 CDA09_10575 cc6ac2d1098a465daecbfbc035e486fa 290 Pfam PF02653 Branched-chain amino acid transport system / permease component 8 274 5.8E-38 T 01-11-2018 IPR001851 ABC transporter, permease GO:0016020|GO:0022857|GO:0055085 CDA09_01850 7dfadf51e063df8865c4a75d642bd67c 908 Gene3D G3DSA:1.10.287.130 347 446 7.9E-31 T 01-11-2018 CDA09_01850 7dfadf51e063df8865c4a75d642bd67c 908 SMART SM00073 801 898 6.1E-7 T 01-11-2018 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160 CDA09_01850 7dfadf51e063df8865c4a75d642bd67c 908 SMART SM00387 495 611 8.9E-37 T 01-11-2018 IPR003594 Histidine kinase/HSP90-like ATPase CDA09_01850 7dfadf51e063df8865c4a75d642bd67c 908 SMART SM00388 383 448 5.5E-24 T 01-11-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 CDA09_01850 7dfadf51e063df8865c4a75d642bd67c 908 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 495 609 5.1E-27 T 01-11-2018 IPR003594 Histidine kinase/HSP90-like ATPase CDA09_01850 7dfadf51e063df8865c4a75d642bd67c 908 SUPERFAMILY SSF47384 369 449 2.55E-22 T 01-11-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 CDA09_01850 7dfadf51e063df8865c4a75d642bd67c 908 Pfam PF00072 Response regulator receiver domain 637 747 2.1E-25 T 01-11-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 CDA09_01850 7dfadf51e063df8865c4a75d642bd67c 908 PRINTS PR00344 Bacterial sensor protein C-terminal signature 571 589 3.3E-14 T 01-11-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 CDA09_01850 7dfadf51e063df8865c4a75d642bd67c 908 PRINTS PR00344 Bacterial sensor protein C-terminal signature 595 608 3.3E-14 T 01-11-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 CDA09_01850 7dfadf51e063df8865c4a75d642bd67c 908 PRINTS PR00344 Bacterial sensor protein C-terminal signature 536 550 3.3E-14 T 01-11-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 CDA09_01850 7dfadf51e063df8865c4a75d642bd67c 908 PRINTS PR00344 Bacterial sensor protein C-terminal signature 554 564 3.3E-14 T 01-11-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 CDA09_01850 7dfadf51e063df8865c4a75d642bd67c 908 Gene3D G3DSA:3.30.565.10 447 612 2.8E-46 T 01-11-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily CDA09_01850 7dfadf51e063df8865c4a75d642bd67c 908 Gene3D G3DSA:1.20.120.160 794 900 4.4E-20 T 01-11-2018 IPR036641 HPT domain superfamily GO:0000160 CDA09_01850 7dfadf51e063df8865c4a75d642bd67c 908 SMART SM00448 635 748 2.6E-35 T 01-11-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 CDA09_01850 7dfadf51e063df8865c4a75d642bd67c 908 SUPERFAMILY SSF47226 731 888 6.54E-22 T 01-11-2018 IPR036641 HPT domain superfamily GO:0000160 CDA09_01850 7dfadf51e063df8865c4a75d642bd67c 908 Pfam PF01627 Hpt domain 811 892 2.2E-10 T 01-11-2018 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160 CDA09_01850 7dfadf51e063df8865c4a75d642bd67c 908 SUPERFAMILY SSF52172 634 754 5.41E-38 T 01-11-2018 IPR011006 CheY-like superfamily CDA09_01850 7dfadf51e063df8865c4a75d642bd67c 908 SUPERFAMILY SSF55874 437 609 4.06E-43 T 01-11-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily CDA09_01850 7dfadf51e063df8865c4a75d642bd67c 908 Pfam PF00512 His Kinase A (phospho-acceptor) domain 383 448 1.6E-18 T 01-11-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 CDA09_01850 7dfadf51e063df8865c4a75d642bd67c 908 Gene3D G3DSA:3.40.50.2300 632 753 7.3E-41 T 01-11-2018 CDA09_17910 41bb0ddfcd6a0d05b482d1d571424d07 249 SMART SM00382 34 219 3.5E-5 T 01-11-2018 IPR003593 AAA+ ATPase domain CDA09_17910 41bb0ddfcd6a0d05b482d1d571424d07 249 Gene3D G3DSA:3.40.50.300 5 243 3.0E-64 T 01-11-2018 CDA09_17910 41bb0ddfcd6a0d05b482d1d571424d07 249 PIRSF PIRSF039137 5 243 2.9E-104 T 01-11-2018 IPR030660 High-affinity branched-chain amino acid transport ATP-binding protein GO:0015658|GO:0015803 CDA09_17910 41bb0ddfcd6a0d05b482d1d571424d07 249 Pfam PF00005 ABC transporter 26 170 2.5E-28 T 01-11-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 CDA09_17910 41bb0ddfcd6a0d05b482d1d571424d07 249 SUPERFAMILY SSF52540 8 242 3.26E-61 T 01-11-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CDA09_17910 41bb0ddfcd6a0d05b482d1d571424d07 249 ProSitePatterns PS00211 ABC transporters family signature. 143 157 - T 01-11-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 CDA09_20985 e7ae2d481219a7545930b4679a9c3d6d 185 SUPERFAMILY SSF53271 15 183 1.31E-42 T 01-11-2018 IPR029057 Phosphoribosyltransferase-like CDA09_20985 e7ae2d481219a7545930b4679a9c3d6d 185 Gene3D G3DSA:3.40.50.2020 3 184 2.6E-47 T 01-11-2018 CDA09_20985 e7ae2d481219a7545930b4679a9c3d6d 185 Pfam PF00156 Phosphoribosyl transferase domain 21 143 6.0E-20 T 01-11-2018 IPR000836 Phosphoribosyltransferase domain GO:0009116 CDA09_14445 e1433c37087199daa8b38d3330398b00 277 SUPERFAMILY SSF48576 3 276 4.08E-95 T 01-11-2018 IPR008949 Isoprenoid synthase domain superfamily CDA09_14445 e1433c37087199daa8b38d3330398b00 277 TIGRFAM TIGR03465 HpnD: squalene synthase HpnD 10 275 1.9E-123 T 01-11-2018 IPR017828 Squalene synthase HpnD-like GO:0016117|GO:0016767 CDA09_14445 e1433c37087199daa8b38d3330398b00 277 ProSitePatterns PS01045 Squalene and phytoene synthases signature 2. 152 177 - T 01-11-2018 IPR019845 Squalene/phytoene synthase, conserved site GO:0016765 Reactome: R-HSA-191273|Reactome: R-HSA-1989781|Reactome: R-HSA-2426168 CDA09_14445 e1433c37087199daa8b38d3330398b00 277 Pfam PF00494 Squalene/phytoene synthase 13 263 3.7E-82 T 01-11-2018 CDA09_14445 e1433c37087199daa8b38d3330398b00 277 Gene3D G3DSA:1.10.600.10 2 275 3.6E-91 T 01-11-2018 IPR008949 Isoprenoid synthase domain superfamily CDA09_02440 2db544bdc2cb2930c81c15248330c8ef 396 SUPERFAMILY SSF88697 1 71 5.52E-17 T 01-11-2018 IPR015947 PUA-like superfamily CDA09_02440 2db544bdc2cb2930c81c15248330c8ef 396 Gene3D G3DSA:2.30.130.10 1 71 3.6E-27 T 01-11-2018 IPR036974 PUA domain superfamily GO:0003723 CDA09_02440 2db544bdc2cb2930c81c15248330c8ef 396 Gene3D G3DSA:3.40.50.150 182 395 7.2E-69 T 01-11-2018 CDA09_02440 2db544bdc2cb2930c81c15248330c8ef 396 Pfam PF10672 S-adenosylmethionine-dependent methyltransferase 103 347 1.1E-23 T 01-11-2018 IPR019614 S-adenosylmethionine-dependent methyltransferase GO:0008168 CDA09_02440 2db544bdc2cb2930c81c15248330c8ef 396 SMART SM00359 2 87 1.3E-15 T 01-11-2018 IPR002478 PUA domain GO:0003723 CDA09_02440 2db544bdc2cb2930c81c15248330c8ef 396 Gene3D G3DSA:3.30.750.80 72 180 6.1E-35 T 01-11-2018 CDA09_02440 2db544bdc2cb2930c81c15248330c8ef 396 SUPERFAMILY SSF53335 79 392 2.89E-65 T 01-11-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase CDA09_22455 ba897ee5e1a9200f9108c7173fcf2a54 159 SMART SM00945 24 130 1.9E-24 T 01-11-2018 IPR016103 ProQ/FinO domain CDA09_22455 ba897ee5e1a9200f9108c7173fcf2a54 159 Pfam PF04352 ProQ/FINO family 31 126 1.1E-22 T 01-11-2018 IPR016103 ProQ/FinO domain CDA09_22455 ba897ee5e1a9200f9108c7173fcf2a54 159 Gene3D G3DSA:1.10.1710.10 4 118 1.6E-26 T 01-11-2018 IPR036442 ProQ/FinO domain superfamily CDA09_22455 ba897ee5e1a9200f9108c7173fcf2a54 159 SUPERFAMILY SSF48657 26 120 5.23E-27 T 01-11-2018 IPR036442 ProQ/FinO domain superfamily CDA09_02435 02a1786a6567cb7a2f96a40eedebbb08 147 SUPERFAMILY SSF46785 71 123 3.38E-7 T 01-11-2018 IPR036390 Winged helix DNA-binding domain superfamily CDA09_02435 02a1786a6567cb7a2f96a40eedebbb08 147 Gene3D G3DSA:1.10.10.10 61 120 2.6E-6 T 01-11-2018 IPR036388 Winged helix-like DNA-binding domain superfamily CDA09_08580 3b2ffc6112fb46afb654d4f1a32abd6a 414 SUPERFAMILY SSF53092 14 167 8.37E-47 T 01-11-2018 IPR029149 Creatinase/Aminopeptidase P/Spt16, N-terminal CDA09_08580 3b2ffc6112fb46afb654d4f1a32abd6a 414 Gene3D G3DSA:3.90.230.10 168 413 5.4E-57 T 01-11-2018 CDA09_08580 3b2ffc6112fb46afb654d4f1a32abd6a 414 SUPERFAMILY SSF55920 169 409 7.98E-62 T 01-11-2018 IPR036005 Creatinase/aminopeptidase-like CDA09_08580 3b2ffc6112fb46afb654d4f1a32abd6a 414 Pfam PF00557 Metallopeptidase family M24 178 394 1.6E-27 T 01-11-2018 IPR000994 Peptidase M24 CDA09_08580 3b2ffc6112fb46afb654d4f1a32abd6a 414 Gene3D G3DSA:3.40.350.10 13 167 4.9E-55 T 01-11-2018 IPR029149 Creatinase/Aminopeptidase P/Spt16, N-terminal CDA09_08580 3b2ffc6112fb46afb654d4f1a32abd6a 414 Pfam PF01321 Creatinase/Prolidase N-terminal domain 38 169 2.1E-18 T 01-11-2018 IPR000587 Creatinase, N-terminal GO:0016787 CDA09_01075 e59fea1a595ec60995dbcda907a4650a 771 SMART SM00965 211 262 1.6E-7 T 01-11-2018 IPR011662 Secretin/TonB, short N-terminal domain GO:0019867 CDA09_01075 e59fea1a595ec60995dbcda907a4650a 771 Pfam PF00963 Cohesin domain 656 732 3.4E-5 T 01-11-2018 IPR002102 Cellulosome anchoring protein, cohesin domain GO:0000272|GO:0030246 CDA09_01075 e59fea1a595ec60995dbcda907a4650a 771 SUPERFAMILY SSF49384 645 739 3.14E-6 T 01-11-2018 IPR008965 CBM2/CBM3, carbohydrate-binding domain superfamily GO:0030246 CDA09_01075 e59fea1a595ec60995dbcda907a4650a 771 Gene3D G3DSA:1.25.40.10 25 168 3.6E-7 T 01-11-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 CDA09_01075 e59fea1a595ec60995dbcda907a4650a 771 Gene3D G3DSA:3.55.50.30 169 280 4.0E-13 T 01-11-2018 CDA09_01075 e59fea1a595ec60995dbcda907a4650a 771 PRINTS PR00811 Bacterial general secretion pathway protein D signature 427 437 1.6E-10 T 01-11-2018 IPR001775 GspD/PilQ family CDA09_01075 e59fea1a595ec60995dbcda907a4650a 771 PRINTS PR00811 Bacterial general secretion pathway protein D signature 550 564 1.6E-10 T 01-11-2018 IPR001775 GspD/PilQ family CDA09_01075 e59fea1a595ec60995dbcda907a4650a 771 PRINTS PR00811 Bacterial general secretion pathway protein D signature 335 345 1.6E-10 T 01-11-2018 IPR001775 GspD/PilQ family CDA09_01075 e59fea1a595ec60995dbcda907a4650a 771 PRINTS PR00811 Bacterial general secretion pathway protein D signature 527 545 1.6E-10 T 01-11-2018 IPR001775 GspD/PilQ family CDA09_01075 e59fea1a595ec60995dbcda907a4650a 771 Pfam PF07660 Secretin and TonB N terminus short domain 211 261 6.7E-8 T 01-11-2018 IPR011662 Secretin/TonB, short N-terminal domain GO:0019867 CDA09_01075 e59fea1a595ec60995dbcda907a4650a 771 PRINTS PR01032 Gene IV protein signature 417 440 1.4E-7 T 01-11-2018 CDA09_01075 e59fea1a595ec60995dbcda907a4650a 771 PRINTS PR01032 Gene IV protein signature 490 518 1.4E-7 T 01-11-2018 CDA09_01075 e59fea1a595ec60995dbcda907a4650a 771 PRINTS PR01032 Gene IV protein signature 543 565 1.4E-7 T 01-11-2018 CDA09_01075 e59fea1a595ec60995dbcda907a4650a 771 Gene3D G3DSA:2.60.40.680 640 760 2.7E-9 T 01-11-2018 CDA09_01075 e59fea1a595ec60995dbcda907a4650a 771 Pfam PF00263 Bacterial type II and III secretion system protein 399 563 6.7E-40 T 01-11-2018 IPR004846 Type II/III secretion system GO:0009306 CDA09_01075 e59fea1a595ec60995dbcda907a4650a 771 SUPERFAMILY SSF48452 29 161 1.55E-7 T 01-11-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 CDA09_16165 b2d460dc1139a76a995a904fe3e697b8 522 Hamap MF_00445 NAD(P)H-quinone oxidoreductase subunit 2, chloroplastic [ndhB]. 6 511 18.088 T 01-11-2018 IPR010096 NAD(P)H-quinone oxidoreductase, subunit N/subunit 2 GO:0008137|GO:0042773|GO:0055114 CDA09_16165 b2d460dc1139a76a995a904fe3e697b8 522 Pfam PF00361 Proton-conducting membrane transporter 158 460 4.7E-70 T 01-11-2018 IPR001750 NADH:quinone oxidoreductase/Mrp antiporter, membrane subunit Reactome: R-HSA-611105|Reactome: R-HSA-6799198 CDA09_16165 b2d460dc1139a76a995a904fe3e697b8 522 PRINTS PR01434 NADH-ubiquinone oxidoreductase chain 5 signature 106 131 8.6E-5 T 01-11-2018 CDA09_16165 b2d460dc1139a76a995a904fe3e697b8 522 PRINTS PR01434 NADH-ubiquinone oxidoreductase chain 5 signature 341 353 8.6E-5 T 01-11-2018 CDA09_16165 b2d460dc1139a76a995a904fe3e697b8 522 PRINTS PR01434 NADH-ubiquinone oxidoreductase chain 5 signature 454 473 8.6E-5 T 01-11-2018 CDA09_16165 b2d460dc1139a76a995a904fe3e697b8 522 PRINTS PR01434 NADH-ubiquinone oxidoreductase chain 5 signature 249 270 8.6E-5 T 01-11-2018 CDA09_16165 b2d460dc1139a76a995a904fe3e697b8 522 TIGRFAM TIGR01770 NDH_I_N: proton-translocating NADH-quinone oxidoreductase, chain N 49 510 1.1E-136 T 01-11-2018 IPR010096 NAD(P)H-quinone oxidoreductase, subunit N/subunit 2 GO:0008137|GO:0042773|GO:0055114 CDA09_22960 f16e0b141990193eee6e42d71dccefd7 288 Pfam PF01774 UreD urease accessory protein 63 261 2.7E-43 T 01-11-2018 IPR002669 Urease accessory protein UreD GO:0006807|GO:0016151 CDA09_22960 f16e0b141990193eee6e42d71dccefd7 288 Hamap MF_01384 Urease accessory protein UreD [ureD]. 19 272 28.727 T 01-11-2018 IPR002669 Urease accessory protein UreD GO:0006807|GO:0016151 CDA09_09950 8edc5cbb4b95e8bf86159468ba309a4a 257 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 180 197 1.3E-37 T 01-11-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CDA09_09950 8edc5cbb4b95e8bf86159468ba309a4a 257 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 13 30 1.3E-37 T 01-11-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CDA09_09950 8edc5cbb4b95e8bf86159468ba309a4a 257 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 160 179 1.3E-37 T 01-11-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CDA09_09950 8edc5cbb4b95e8bf86159468ba309a4a 257 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 87 98 1.3E-37 T 01-11-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CDA09_09950 8edc5cbb4b95e8bf86159468ba309a4a 257 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 214 234 1.3E-37 T 01-11-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CDA09_09950 8edc5cbb4b95e8bf86159468ba309a4a 257 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 134 150 1.3E-37 T 01-11-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CDA09_09950 8edc5cbb4b95e8bf86159468ba309a4a 257 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 18 250 7.8E-64 T 01-11-2018 CDA09_09950 8edc5cbb4b95e8bf86159468ba309a4a 257 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 160 179 1.2E-7 T 01-11-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CDA09_09950 8edc5cbb4b95e8bf86159468ba309a4a 257 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 140 148 1.2E-7 T 01-11-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CDA09_09950 8edc5cbb4b95e8bf86159468ba309a4a 257 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 87 98 1.2E-7 T 01-11-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CDA09_09950 8edc5cbb4b95e8bf86159468ba309a4a 257 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 147 175 - T 01-11-2018 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 CDA09_09950 8edc5cbb4b95e8bf86159468ba309a4a 257 SMART SM00822 This enzymatic domain is part of bacterial polyketide synthases and catalyses the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain. It uses NADPH to reduce the keto group to a hydroxy group. 12 196 2.4E-4 T 01-11-2018 CDA09_09950 8edc5cbb4b95e8bf86159468ba309a4a 257 SUPERFAMILY SSF51735 10 249 7.48E-84 T 01-11-2018 IPR036291 NAD(P)-binding domain superfamily CDA09_09950 8edc5cbb4b95e8bf86159468ba309a4a 257 Gene3D G3DSA:3.40.50.720 1 252 2.1E-83 T 01-11-2018 CDA09_00795 0737e2af90b4d1a0a6f7a2ad957f3406 300 PIRSF PIRSF006221 9 299 4.7E-82 T 01-11-2018 IPR016477 Fructosamine/Ketosamine-3-kinase Reactome: R-HSA-163841 CDA09_00795 0737e2af90b4d1a0a6f7a2ad957f3406 300 Gene3D G3DSA:3.90.1200.10 105 299 2.2E-62 T 01-11-2018 CDA09_00795 0737e2af90b4d1a0a6f7a2ad957f3406 300 SUPERFAMILY SSF56112 19 293 2.48E-40 T 01-11-2018 IPR011009 Protein kinase-like domain superfamily CDA09_00795 0737e2af90b4d1a0a6f7a2ad957f3406 300 Pfam PF03881 Fructosamine kinase 11 295 9.7E-96 T 01-11-2018 IPR016477 Fructosamine/Ketosamine-3-kinase Reactome: R-HSA-163841 CDA09_00795 0737e2af90b4d1a0a6f7a2ad957f3406 300 Gene3D G3DSA:3.30.200.20 9 99 1.1E-14 T 01-11-2018 CDA09_14010 754df566564f15049c6afc25e31ca7a8 256 Pfam PF14348 Domain of unknown function (DUF4400) 62 253 7.7E-45 T 01-11-2018 IPR022266 Integrating conjugative element protein, PFL4697-type CDA09_14010 754df566564f15049c6afc25e31ca7a8 256 TIGRFAM TIGR03747 conj_TIGR03747: integrating conjugative element membrane protein, PFL_4697 family 27 256 1.3E-41 T 01-11-2018 IPR022266 Integrating conjugative element protein, PFL4697-type CDA09_00900 629c58de13bddc38e7584b1fff226463 390 PIRSF PIRSF004810 1 388 9.0E-86 T 01-11-2018 IPR014047 Chromate transporter, long chain CDA09_00900 629c58de13bddc38e7584b1fff226463 390 TIGRFAM TIGR00937 2A51: chromate efflux transporter 20 381 4.3E-131 T 01-11-2018 IPR014047 Chromate transporter, long chain CDA09_00900 629c58de13bddc38e7584b1fff226463 390 Pfam PF02417 Chromate transporter 13 178 7.1E-34 T 01-11-2018 IPR003370 Chromate transporter GO:0015109|GO:0015703 CDA09_00900 629c58de13bddc38e7584b1fff226463 390 Pfam PF02417 Chromate transporter 218 381 3.0E-33 T 01-11-2018 IPR003370 Chromate transporter GO:0015109|GO:0015703 CDA09_04845 b1808dfa2d01e72dc120459730ddbfc8 215 Gene3D G3DSA:1.10.260.40 23 97 6.3E-6 T 01-11-2018 CDA09_13320 42066e99ca915dd876478943704efb9e 234 Pfam PF02508 Rnf-Nqr subunit, membrane protein 9 200 8.0E-59 T 01-11-2018 IPR003667 NqrDE/RnfAE GO:0016020 CDA09_13320 42066e99ca915dd876478943704efb9e 234 PIRSF PIRSF006102 2 218 6.9E-69 T 01-11-2018 IPR003667 NqrDE/RnfAE GO:0016020 CDA09_13320 42066e99ca915dd876478943704efb9e 234 Hamap MF_00478 Ion-translocating oxidoreductase complex subunit E [rsxE]. 3 210 24.998 T 01-11-2018 IPR010968 Ion-translocating oxidoreductase complex subunit E GO:0016020|GO:0022900 CDA09_13320 42066e99ca915dd876478943704efb9e 234 TIGRFAM TIGR01948 rnfE: electron transport complex, RnfABCDGE type, E subunit 9 208 9.7E-73 T 01-11-2018 IPR010968 Ion-translocating oxidoreductase complex subunit E GO:0016020|GO:0022900 CDA09_03725 91845c963a8f32328de35caea7e6127f 425 Pfam PF00171 Aldehyde dehydrogenase family 316 381 9.1E-10 T 01-11-2018 IPR015590 Aldehyde dehydrogenase domain GO:0016491|GO:0055114 CDA09_03725 91845c963a8f32328de35caea7e6127f 425 Pfam PF00171 Aldehyde dehydrogenase family 12 279 1.3E-17 T 01-11-2018 IPR015590 Aldehyde dehydrogenase domain GO:0016491|GO:0055114 CDA09_03725 91845c963a8f32328de35caea7e6127f 425 Gene3D G3DSA:3.40.309.10 227 382 8.1E-168 T 01-11-2018 IPR016163 Aldehyde dehydrogenase, C-terminal GO:0016491|GO:0016620|GO:0055114 CDA09_03725 91845c963a8f32328de35caea7e6127f 425 Hamap MF_00412 Gamma-glutamyl phosphate reductase [proA]. 6 424 42.126 T 01-11-2018 IPR000965 GPR domain GO:0004350|GO:0006561|GO:0055114 KEGG: 00330+1.2.1.41|KEGG: 00332+1.2.1.41|MetaCyc: PWY-3341|MetaCyc: PWY-6922|Reactome: R-HSA-70614 CDA09_03725 91845c963a8f32328de35caea7e6127f 425 Gene3D G3DSA:3.40.605.10 13 421 8.1E-168 T 01-11-2018 IPR016162 Aldehyde dehydrogenase, N-terminal GO:0016491|GO:0055114 CDA09_03725 91845c963a8f32328de35caea7e6127f 425 SUPERFAMILY SSF53720 5 424 8.12E-122 T 01-11-2018 IPR016161 Aldehyde/histidinol dehydrogenase GO:0016491|GO:0055114 CDA09_03725 91845c963a8f32328de35caea7e6127f 425 PIRSF PIRSF000151 1 425 1.2E-177 T 01-11-2018 IPR012134 Glutamate-5-semialdehyde dehydrogenase GO:0004350|GO:0006561|GO:0050661|GO:0055114 KEGG: 00330+1.2.1.41|KEGG: 00332+1.2.1.41|MetaCyc: PWY-3341|MetaCyc: PWY-6922 CDA09_03725 91845c963a8f32328de35caea7e6127f 425 ProSitePatterns PS01223 Gamma-glutamyl phosphate reductase signature. 331 352 - T 01-11-2018 IPR020593 Gamma-glutamyl phosphate reductase GPR, conserved site GO:0004350|GO:0006561|GO:0055114 KEGG: 00330+1.2.1.41|KEGG: 00332+1.2.1.41|MetaCyc: PWY-3341|MetaCyc: PWY-6922|Reactome: R-HSA-70614 CDA09_03725 91845c963a8f32328de35caea7e6127f 425 TIGRFAM TIGR00407 proA: glutamate-5-semialdehyde dehydrogenase 14 414 1.5E-149 T 01-11-2018 IPR000965 GPR domain GO:0004350|GO:0006561|GO:0055114 KEGG: 00330+1.2.1.41|KEGG: 00332+1.2.1.41|MetaCyc: PWY-3341|MetaCyc: PWY-6922|Reactome: R-HSA-70614 CDA09_20915 91c2d44ceb598adfd8e4c21855f3b3fb 248 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 8 25 1.2E-31 T 01-11-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CDA09_20915 91c2d44ceb598adfd8e4c21855f3b3fb 248 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 209 229 1.2E-31 T 01-11-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CDA09_20915 91c2d44ceb598adfd8e4c21855f3b3fb 248 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 84 95 1.2E-31 T 01-11-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CDA09_20915 91c2d44ceb598adfd8e4c21855f3b3fb 248 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 156 175 1.2E-31 T 01-11-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CDA09_20915 91c2d44ceb598adfd8e4c21855f3b3fb 248 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 176 193 1.2E-31 T 01-11-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CDA09_20915 91c2d44ceb598adfd8e4c21855f3b3fb 248 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 130 146 1.2E-31 T 01-11-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CDA09_20915 91c2d44ceb598adfd8e4c21855f3b3fb 248 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 13 243 1.0E-50 T 01-11-2018 CDA09_20915 91c2d44ceb598adfd8e4c21855f3b3fb 248 Gene3D G3DSA:3.40.50.720 1 246 2.3E-68 T 01-11-2018 CDA09_20915 91c2d44ceb598adfd8e4c21855f3b3fb 248 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 136 144 3.9E-11 T 01-11-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CDA09_20915 91c2d44ceb598adfd8e4c21855f3b3fb 248 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 156 175 3.9E-11 T 01-11-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CDA09_20915 91c2d44ceb598adfd8e4c21855f3b3fb 248 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 84 95 3.9E-11 T 01-11-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CDA09_20915 91c2d44ceb598adfd8e4c21855f3b3fb 248 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 143 171 - T 01-11-2018 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 CDA09_20915 91c2d44ceb598adfd8e4c21855f3b3fb 248 SUPERFAMILY SSF51735 8 246 4.06E-69 T 01-11-2018 IPR036291 NAD(P)-binding domain superfamily CDA09_18015 505cf6ca012e6d92de623a468e396a4a 427 TIGRFAM TIGR00786 dctM: TRAP transporter, DctM subunit 17 421 3.0E-144 T 01-11-2018 IPR004681 TRAP transporter large membrane protein DctM GO:0016021 CDA09_18015 505cf6ca012e6d92de623a468e396a4a 427 PIRSF PIRSF006066 1 427 4.1E-150 T 01-11-2018 IPR004681 TRAP transporter large membrane protein DctM GO:0016021 CDA09_18015 505cf6ca012e6d92de623a468e396a4a 427 Pfam PF06808 Tripartite ATP-independent periplasmic transporter, DctM component 7 416 3.3E-124 T 01-11-2018 IPR010656 TRAP C4-dicarboxylate transport system permease DctM subunit CDA09_04060 6f0f47ae21c457a96bb275e2cbf6c754 84 SUPERFAMILY SSF54862 4 75 1.07E-19 T 01-11-2018 CDA09_04060 6f0f47ae21c457a96bb275e2cbf6c754 84 Pfam PF00037 4Fe-4S binding domain 6 25 3.7E-6 T 01-11-2018 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain CDA09_04060 6f0f47ae21c457a96bb275e2cbf6c754 84 Gene3D G3DSA:3.30.70.20 2 81 1.5E-34 T 01-11-2018 CDA09_04060 6f0f47ae21c457a96bb275e2cbf6c754 84 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 9 20 - T 01-11-2018 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site CDA09_03430 32c99bcdf4309c0fa531cfed07598445 55 SUPERFAMILY SSF57829 1 53 6.71E-20 T 01-11-2018 IPR011332 Zinc-binding ribosomal protein GO:0006412 CDA09_03430 32c99bcdf4309c0fa531cfed07598445 55 TIGRFAM TIGR01023 rpmG_bact: ribosomal protein bL33 1 55 8.9E-26 T 01-11-2018 IPR001705 Ribosomal protein L33 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 CDA09_03430 32c99bcdf4309c0fa531cfed07598445 55 ProSitePatterns PS00582 Ribosomal protein L33 signature. 21 40 - T 01-11-2018 IPR018264 Ribosomal protein L33, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 CDA09_03430 32c99bcdf4309c0fa531cfed07598445 55 Hamap MF_00294 50S ribosomal protein L33 [rpmG]. 5 53 15.168 T 01-11-2018 IPR001705 Ribosomal protein L33 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 CDA09_03430 32c99bcdf4309c0fa531cfed07598445 55 Pfam PF00471 Ribosomal protein L33 7 53 1.8E-18 T 01-11-2018 IPR001705 Ribosomal protein L33 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 CDA09_03430 32c99bcdf4309c0fa531cfed07598445 55 Gene3D G3DSA:2.20.28.120 1 55 1.2E-29 T 01-11-2018 IPR038584 Ribosomal protein L33 superfamily Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 CDA09_11655 7b5911a8cd35c4a237842f724e9ca79e 249 SMART SM00822 This enzymatic domain is part of bacterial polyketide synthases and catalyses the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain. It uses NADPH to reduce the keto group to a hydroxy group. 9 188 3.0E-5 T 01-11-2018 CDA09_11655 7b5911a8cd35c4a237842f724e9ca79e 249 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 131 147 7.3E-43 T 01-11-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CDA09_11655 7b5911a8cd35c4a237842f724e9ca79e 249 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 211 231 7.3E-43 T 01-11-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CDA09_11655 7b5911a8cd35c4a237842f724e9ca79e 249 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 10 27 7.3E-43 T 01-11-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CDA09_11655 7b5911a8cd35c4a237842f724e9ca79e 249 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 157 176 7.3E-43 T 01-11-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CDA09_11655 7b5911a8cd35c4a237842f724e9ca79e 249 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 85 96 7.3E-43 T 01-11-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CDA09_11655 7b5911a8cd35c4a237842f724e9ca79e 249 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 178 195 7.3E-43 T 01-11-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CDA09_11655 7b5911a8cd35c4a237842f724e9ca79e 249 SUPERFAMILY SSF51735 8 248 4.57E-82 T 01-11-2018 IPR036291 NAD(P)-binding domain superfamily CDA09_11655 7b5911a8cd35c4a237842f724e9ca79e 249 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 144 172 - T 01-11-2018 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 CDA09_11655 7b5911a8cd35c4a237842f724e9ca79e 249 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 15 247 5.9E-63 T 01-11-2018 CDA09_11655 7b5911a8cd35c4a237842f724e9ca79e 249 Gene3D G3DSA:3.40.50.720 1 249 6.5E-83 T 01-11-2018 CDA09_11655 7b5911a8cd35c4a237842f724e9ca79e 249 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 137 145 1.2E-11 T 01-11-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CDA09_11655 7b5911a8cd35c4a237842f724e9ca79e 249 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 157 176 1.2E-11 T 01-11-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CDA09_11655 7b5911a8cd35c4a237842f724e9ca79e 249 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 85 96 1.2E-11 T 01-11-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CDA09_07320 f93c4e10e276e6f712e21c2d1b97b3a1 423 SUPERFAMILY SSF53383 1 421 1.46E-130 T 01-11-2018 IPR015424 Pyridoxal phosphate-dependent transferase CDA09_07320 f93c4e10e276e6f712e21c2d1b97b3a1 423 PIRSF PIRSF001434 1 423 3.3E-132 T 01-11-2018 IPR000277 Cys/Met metabolism, pyridoxal phosphate-dependent enzyme GO:0030170 Reactome: R-HSA-1614558|Reactome: R-HSA-1614603|Reactome: R-HSA-2408508 CDA09_07320 f93c4e10e276e6f712e21c2d1b97b3a1 423 Gene3D G3DSA:3.40.640.10 1 285 2.7E-105 T 01-11-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 CDA09_07320 f93c4e10e276e6f712e21c2d1b97b3a1 423 TIGRFAM TIGR01326 OAH_OAS_sulfhy: O-acetylhomoserine aminocarboxypropyltransferase/cysteine synthase 3 421 4.1E-199 T 01-11-2018 IPR006235 O-acetylhomoserine/O-acetylserine sulfhydrylase GO:0006520|GO:0016765 CDA09_07320 f93c4e10e276e6f712e21c2d1b97b3a1 423 ProSitePatterns PS00868 Cys/Met metabolism enzymes pyridoxal-phosphate attachment site. 196 210 - T 01-11-2018 IPR000277 Cys/Met metabolism, pyridoxal phosphate-dependent enzyme GO:0030170 Reactome: R-HSA-1614558|Reactome: R-HSA-1614603|Reactome: R-HSA-2408508 CDA09_07320 f93c4e10e276e6f712e21c2d1b97b3a1 423 Gene3D G3DSA:3.90.1150.10 289 423 3.2E-50 T 01-11-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 CDA09_07320 f93c4e10e276e6f712e21c2d1b97b3a1 423 Pfam PF01053 Cys/Met metabolism PLP-dependent enzyme 4 420 2.4E-144 T 01-11-2018 IPR000277 Cys/Met metabolism, pyridoxal phosphate-dependent enzyme GO:0030170 Reactome: R-HSA-1614558|Reactome: R-HSA-1614603|Reactome: R-HSA-2408508 CDA09_16100 c12d5e51d508006f8796ff9eebdc05e5 286 SUPERFAMILY SSF109604 18 275 1.35E-37 T 01-11-2018 CDA09_16100 c12d5e51d508006f8796ff9eebdc05e5 286 Pfam PF08668 HDOD domain 27 205 2.3E-28 T 01-11-2018 IPR013976 Metal-dependent hydrolase HDOD CDA09_16100 c12d5e51d508006f8796ff9eebdc05e5 286 Gene3D G3DSA:1.10.3210.10 7 246 2.5E-34 T 01-11-2018 CDA09_12430 cc237d4dbf03d074749c2c73e1c9c84c 279 SUPERFAMILY SSF51569 2 272 5.59E-106 T 01-11-2018 CDA09_12430 cc237d4dbf03d074749c2c73e1c9c84c 279 TIGRFAM TIGR01362 KDO8P_synth: 3-deoxy-8-phosphooctulonate synthase 13 270 9.4E-125 T 01-11-2018 IPR006269 3-deoxy-8-phosphooctulonate synthase GO:0005737|GO:0008676 KEGG: 00540+2.5.1.55|MetaCyc: PWY-1269|MetaCyc: PWY-7674 CDA09_12430 cc237d4dbf03d074749c2c73e1c9c84c 279 Pfam PF00793 DAHP synthetase I family 7 270 2.9E-68 T 01-11-2018 IPR006218 DAHP synthetase I/KDSA GO:0009058 KEGG: 00540+2.5.1.55|MetaCyc: PWY-1269|MetaCyc: PWY-7674 CDA09_12430 cc237d4dbf03d074749c2c73e1c9c84c 279 Gene3D G3DSA:3.20.20.70 3 277 1.7E-105 T 01-11-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 CDA09_12430 cc237d4dbf03d074749c2c73e1c9c84c 279 Hamap MF_00056 2-dehydro-3-deoxyphosphooctonate aldolase [kdsA]. 8 272 53.334 T 01-11-2018 IPR006269 3-deoxy-8-phosphooctulonate synthase GO:0005737|GO:0008676 KEGG: 00540+2.5.1.55|MetaCyc: PWY-1269|MetaCyc: PWY-7674 CDA09_01655 0f746dd9dfb3acbfd28fda9021736bc4 468 SMART SM00448 10 123 6.4E-37 T 01-11-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 CDA09_01655 0f746dd9dfb3acbfd28fda9021736bc4 468 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 348 454 1.5E-21 T 01-11-2018 IPR003594 Histidine kinase/HSP90-like ATPase CDA09_01655 0f746dd9dfb3acbfd28fda9021736bc4 468 Pfam PF00512 His Kinase A (phospho-acceptor) domain 222 304 8.9E-13 T 01-11-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 CDA09_01655 0f746dd9dfb3acbfd28fda9021736bc4 468 SUPERFAMILY SSF47384 217 305 1.41E-7 T 01-11-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 CDA09_01655 0f746dd9dfb3acbfd28fda9021736bc4 468 SUPERFAMILY SSF55874 291 454 4.19E-42 T 01-11-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily CDA09_01655 0f746dd9dfb3acbfd28fda9021736bc4 468 SMART SM00388 222 304 1.8E-5 T 01-11-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 CDA09_01655 0f746dd9dfb3acbfd28fda9021736bc4 468 Gene3D G3DSA:3.30.565.10 306 462 3.6E-44 T 01-11-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily CDA09_01655 0f746dd9dfb3acbfd28fda9021736bc4 468 Pfam PF00072 Response regulator receiver domain 12 123 8.4E-26 T 01-11-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 CDA09_01655 0f746dd9dfb3acbfd28fda9021736bc4 468 PRINTS PR00344 Bacterial sensor protein C-terminal signature 415 433 1.4E-18 T 01-11-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 CDA09_01655 0f746dd9dfb3acbfd28fda9021736bc4 468 PRINTS PR00344 Bacterial sensor protein C-terminal signature 384 398 1.4E-18 T 01-11-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 CDA09_01655 0f746dd9dfb3acbfd28fda9021736bc4 468 PRINTS PR00344 Bacterial sensor protein C-terminal signature 439 452 1.4E-18 T 01-11-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 CDA09_01655 0f746dd9dfb3acbfd28fda9021736bc4 468 PRINTS PR00344 Bacterial sensor protein C-terminal signature 402 412 1.4E-18 T 01-11-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 CDA09_01655 0f746dd9dfb3acbfd28fda9021736bc4 468 Gene3D G3DSA:3.40.50.2300 6 130 8.8E-35 T 01-11-2018 CDA09_01655 0f746dd9dfb3acbfd28fda9021736bc4 468 SMART SM00387 344 455 3.0E-33 T 01-11-2018 IPR003594 Histidine kinase/HSP90-like ATPase CDA09_01655 0f746dd9dfb3acbfd28fda9021736bc4 468 Gene3D G3DSA:1.10.287.130 199 299 1.3E-23 T 01-11-2018 CDA09_01655 0f746dd9dfb3acbfd28fda9021736bc4 468 SUPERFAMILY SSF52172 12 128 4.41E-37 T 01-11-2018 IPR011006 CheY-like superfamily CDA09_05865 fcfce013a4b7dbbde8edb61b27988fc5 361 Gene3D G3DSA:3.40.190.10 124 225 4.5E-106 T 01-11-2018 CDA09_05865 fcfce013a4b7dbbde8edb61b27988fc5 361 Pfam PF09084 NMT1/THI5 like 84 256 4.3E-17 T 01-11-2018 IPR015168 SsuA/THI5-like CDA09_05865 fcfce013a4b7dbbde8edb61b27988fc5 361 Gene3D G3DSA:3.40.190.10 33 345 4.5E-106 T 01-11-2018 CDA09_05865 fcfce013a4b7dbbde8edb61b27988fc5 361 SUPERFAMILY SSF53850 30 257 3.81E-31 T 01-11-2018 CDA09_03305 d7c05cf4a55458433dd51802d47978a7 368 Pfam PF00355 Rieske [2Fe-2S] domain 43 119 1.2E-12 T 01-11-2018 IPR017941 Rieske [2Fe-2S] iron-sulphur domain GO:0016491|GO:0051537|GO:0055114 CDA09_03305 d7c05cf4a55458433dd51802d47978a7 368 Gene3D G3DSA:2.102.10.10 37 150 3.2E-43 T 01-11-2018 IPR036922 Rieske [2Fe-2S] iron-sulphur domain superfamily GO:0016491|GO:0051537|GO:0055114 CDA09_03305 d7c05cf4a55458433dd51802d47978a7 368 Gene3D G3DSA:3.90.380.10 17 358 3.2E-43 T 01-11-2018 CDA09_03305 d7c05cf4a55458433dd51802d47978a7 368 Pfam PF00848 Ring hydroxylating alpha subunit (catalytic domain) 167 363 4.6E-33 T 01-11-2018 IPR015879 Aromatic-ring-hydroxylating dioxygenase, alpha subunit, C-terminal domain GO:0005506|GO:0044237|GO:0051537|GO:0055114 CDA09_03305 d7c05cf4a55458433dd51802d47978a7 368 SUPERFAMILY SSF55961 159 365 7.3E-42 T 01-11-2018 CDA09_03305 d7c05cf4a55458433dd51802d47978a7 368 SUPERFAMILY SSF50022 12 141 2.36E-33 T 01-11-2018 IPR036922 Rieske [2Fe-2S] iron-sulphur domain superfamily GO:0016491|GO:0051537|GO:0055114 CDA09_03485 f32adf253b5293e541b6c268d2e5050c 745 SUPERFAMILY SSF53659 6 743 0.0 T 01-11-2018 CDA09_03485 f32adf253b5293e541b6c268d2e5050c 745 Gene3D G3DSA:3.40.718.10 407 660 7.4E-7 T 01-11-2018 CDA09_03485 f32adf253b5293e541b6c268d2e5050c 745 Pfam PF03971 Monomeric isocitrate dehydrogenase 7 740 0.0 T 01-11-2018 IPR004436 Isocitrate dehydrogenase NADP-dependent, monomeric GO:0004450|GO:0006099|GO:0055114 KEGG: 00020+1.1.1.42|KEGG: 00480+1.1.1.42|KEGG: 00720+1.1.1.42|MetaCyc: PWY-5913|MetaCyc: PWY-6549|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7124|MetaCyc: PWY-7254|MetaCyc: PWY-7268 CDA09_03485 f32adf253b5293e541b6c268d2e5050c 745 TIGRFAM TIGR00178 monomer_idh: isocitrate dehydrogenase, NADP-dependent 1 744 0.0 T 01-11-2018 IPR004436 Isocitrate dehydrogenase NADP-dependent, monomeric GO:0004450|GO:0006099|GO:0055114 KEGG: 00020+1.1.1.42|KEGG: 00480+1.1.1.42|KEGG: 00720+1.1.1.42|MetaCyc: PWY-5913|MetaCyc: PWY-6549|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7124|MetaCyc: PWY-7254|MetaCyc: PWY-7268 CDA09_03485 f32adf253b5293e541b6c268d2e5050c 745 PIRSF PIRSF009407 1 744 0.0 T 01-11-2018 IPR004436 Isocitrate dehydrogenase NADP-dependent, monomeric GO:0004450|GO:0006099|GO:0055114 KEGG: 00020+1.1.1.42|KEGG: 00480+1.1.1.42|KEGG: 00720+1.1.1.42|MetaCyc: PWY-5913|MetaCyc: PWY-6549|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7124|MetaCyc: PWY-7254|MetaCyc: PWY-7268 CDA09_04560 53aea154de7ade55b45c4ec92298067f 111 Pfam PF00355 Rieske [2Fe-2S] domain 12 88 3.0E-15 T 01-11-2018 IPR017941 Rieske [2Fe-2S] iron-sulphur domain GO:0016491|GO:0051537|GO:0055114 CDA09_04560 53aea154de7ade55b45c4ec92298067f 111 SUPERFAMILY SSF50022 11 111 1.05E-31 T 01-11-2018 IPR036922 Rieske [2Fe-2S] iron-sulphur domain superfamily GO:0016491|GO:0051537|GO:0055114 CDA09_04560 53aea154de7ade55b45c4ec92298067f 111 Gene3D G3DSA:2.102.10.10 11 111 4.1E-29 T 01-11-2018 IPR036922 Rieske [2Fe-2S] iron-sulphur domain superfamily GO:0016491|GO:0051537|GO:0055114 CDA09_04560 53aea154de7ade55b45c4ec92298067f 111 TIGRFAM TIGR02378 nirD_assim_sml: nitrite reductase [NAD(P)H], small subunit 12 110 9.0E-28 T 01-11-2018 IPR012748 Nitrite reductase [NAD(P)H] small subunit, NirD GO:0008942|GO:0042128|GO:0055114 CDA09_15245 f0c93b73607f6e8cdcd6950f83502a09 157 Pfam PF04246 Positive regulator of sigma(E), RseC/MucC 9 144 9.2E-23 T 01-11-2018 CDA09_15245 f0c93b73607f6e8cdcd6950f83502a09 157 PIRSF PIRSF004923 1 149 2.2E-18 T 01-11-2018 IPR026268 Protein RseC CDA09_13915 1b52e278c465c50cd4c3edbf11b94ee7 543 Pfam PF00501 AMP-binding enzyme 23 430 1.8E-83 T 01-11-2018 IPR000873 AMP-dependent synthetase/ligase GO:0003824 CDA09_13915 1b52e278c465c50cd4c3edbf11b94ee7 543 Gene3D G3DSA:3.40.50.12780 15 427 9.4E-95 T 01-11-2018 CDA09_13915 1b52e278c465c50cd4c3edbf11b94ee7 543 Pfam PF13193 AMP-binding enzyme C-terminal domain 440 514 1.5E-11 T 01-11-2018 IPR025110 AMP-binding enzyme, C-terminal domain CDA09_13915 1b52e278c465c50cd4c3edbf11b94ee7 543 Gene3D G3DSA:3.30.300.310 428 529 2.0E-20 T 01-11-2018 CDA09_13915 1b52e278c465c50cd4c3edbf11b94ee7 543 ProSitePatterns PS00455 Putative AMP-binding domain signature. 182 193 - T 01-11-2018 IPR020845 AMP-binding, conserved site CDA09_13915 1b52e278c465c50cd4c3edbf11b94ee7 543 SUPERFAMILY SSF56801 15 527 1.44E-124 T 01-11-2018 CDA09_08845 5c6f965b66ea6edffb790bef8728e414 327 TIGRFAM TIGR00749 glk: glucokinase 12 317 1.5E-90 T 01-11-2018 IPR003836 Glucokinase GO:0004340|GO:0005524|GO:0005536|GO:0006096|GO:0051156 KEGG: 00010+2.7.1.2|KEGG: 00052+2.7.1.2|KEGG: 00500+2.7.1.2|KEGG: 00520+2.7.1.2|KEGG: 00521+2.7.1.2|KEGG: 00524+2.7.1.2|MetaCyc: PWY-2722|MetaCyc: PWY-2723|MetaCyc: PWY-5514|MetaCyc: PWY-5661|MetaCyc: PWY-621|MetaCyc: PWY-7238|MetaCyc: PWY-7385 CDA09_08845 5c6f965b66ea6edffb790bef8728e414 327 Hamap MF_00524 Glucokinase [glk]. 10 323 33.678 T 01-11-2018 IPR003836 Glucokinase GO:0004340|GO:0005524|GO:0005536|GO:0006096|GO:0051156 KEGG: 00010+2.7.1.2|KEGG: 00052+2.7.1.2|KEGG: 00500+2.7.1.2|KEGG: 00520+2.7.1.2|KEGG: 00521+2.7.1.2|KEGG: 00524+2.7.1.2|MetaCyc: PWY-2722|MetaCyc: PWY-2723|MetaCyc: PWY-5514|MetaCyc: PWY-5661|MetaCyc: PWY-621|MetaCyc: PWY-7238|MetaCyc: PWY-7385 CDA09_08845 5c6f965b66ea6edffb790bef8728e414 327 SUPERFAMILY SSF53067 12 321 9.32E-63 T 01-11-2018 CDA09_08845 5c6f965b66ea6edffb790bef8728e414 327 Gene3D G3DSA:3.30.420.40 12 317 3.7E-102 T 01-11-2018 CDA09_08845 5c6f965b66ea6edffb790bef8728e414 327 Gene3D G3DSA:3.40.367.20 107 306 3.7E-102 T 01-11-2018 CDA09_08845 5c6f965b66ea6edffb790bef8728e414 327 Pfam PF02685 Glucokinase 12 322 1.2E-108 T 01-11-2018 IPR003836 Glucokinase GO:0004340|GO:0005524|GO:0005536|GO:0006096|GO:0051156 KEGG: 00010+2.7.1.2|KEGG: 00052+2.7.1.2|KEGG: 00500+2.7.1.2|KEGG: 00520+2.7.1.2|KEGG: 00521+2.7.1.2|KEGG: 00524+2.7.1.2|MetaCyc: PWY-2722|MetaCyc: PWY-2723|MetaCyc: PWY-5514|MetaCyc: PWY-5661|MetaCyc: PWY-621|MetaCyc: PWY-7238|MetaCyc: PWY-7385 CDA09_05370 286af14a12fc82ed75fec0be2cbcc0e4 183 Gene3D G3DSA:1.20.1200.10 17 183 6.6E-62 T 01-11-2018 IPR036451 Cobalamin adenosyltransferase-like superfamily KEGG: 00860+2.5.1.17|Reactome: R-HSA-196741|Reactome: R-HSA-3359471 CDA09_05370 286af14a12fc82ed75fec0be2cbcc0e4 183 SUPERFAMILY SSF89028 7 178 5.1E-61 T 01-11-2018 IPR036451 Cobalamin adenosyltransferase-like superfamily KEGG: 00860+2.5.1.17|Reactome: R-HSA-196741|Reactome: R-HSA-3359471 CDA09_05370 286af14a12fc82ed75fec0be2cbcc0e4 183 Pfam PF01923 Cobalamin adenosyltransferase 8 165 3.6E-56 T 01-11-2018 IPR016030 Cobalamin adenosyltransferase-like KEGG: 00860+2.5.1.17|Reactome: R-HSA-196741|Reactome: R-HSA-3359471 CDA09_05370 286af14a12fc82ed75fec0be2cbcc0e4 183 TIGRFAM TIGR00636 PduO_Nterm: ATP:cob(I)alamin adenosyltransferase 9 178 9.3E-59 T 01-11-2018 IPR029499 ATP:cob(I)alamin adenosyltransferase, PduO-type KEGG: 00860+2.5.1.17|Reactome: R-HSA-196741|Reactome: R-HSA-3359471 CDA09_05370 286af14a12fc82ed75fec0be2cbcc0e4 183 ProDom PD007457 TRANSFERASE ADENOSYLTRANSFERASE COBALAMIN ATP:COBIALAMIN ADENOSYLTRANSFERASE PDUO TYPE RELATED ACIDURIA YVQK 24 179 2.0E-66 T 01-11-2018 IPR029499 ATP:cob(I)alamin adenosyltransferase, PduO-type KEGG: 00860+2.5.1.17|Reactome: R-HSA-196741|Reactome: R-HSA-3359471 CDA09_22800 3a5edda94c90d92d642692e22e5f6340 89 Gene3D G3DSA:3.30.1340.10 1 88 1.9E-31 T 01-11-2018 IPR035895 HPr-like superfamily CDA09_22800 3a5edda94c90d92d642692e22e5f6340 89 ProSitePatterns PS00589 PTS HPR domain serine phosphorylation site signature. 39 54 - T 01-11-2018 IPR002114 Phosphotransferase system, HPr serine phosphorylation site CDA09_22800 3a5edda94c90d92d642692e22e5f6340 89 SUPERFAMILY SSF55594 1 87 1.83E-29 T 01-11-2018 IPR035895 HPr-like superfamily CDA09_22800 3a5edda94c90d92d642692e22e5f6340 89 ProSitePatterns PS00369 PTS HPR domain histidine phosphorylation site signature. 13 20 - T 01-11-2018 IPR001020 Phosphotransferase system, HPr histidine phosphorylation site CDA09_22800 3a5edda94c90d92d642692e22e5f6340 89 TIGRFAM TIGR01003 PTS_HPr_family: phosphocarrier, HPr family 1 81 2.9E-32 T 01-11-2018 IPR000032 Phosphocarrier protein HPr-like CDA09_22800 3a5edda94c90d92d642692e22e5f6340 89 Pfam PF00381 PTS HPr component phosphorylation site 4 82 4.4E-27 T 01-11-2018 IPR000032 Phosphocarrier protein HPr-like CDA09_22800 3a5edda94c90d92d642692e22e5f6340 89 PRINTS PR00107 Phosphocarrier protein signature 38 53 3.1E-17 T 01-11-2018 IPR000032 Phosphocarrier protein HPr-like CDA09_22800 3a5edda94c90d92d642692e22e5f6340 89 PRINTS PR00107 Phosphocarrier protein signature 13 29 3.1E-17 T 01-11-2018 IPR000032 Phosphocarrier protein HPr-like CDA09_22800 3a5edda94c90d92d642692e22e5f6340 89 PRINTS PR00107 Phosphocarrier protein signature 53 70 3.1E-17 T 01-11-2018 IPR000032 Phosphocarrier protein HPr-like CDA09_17545 0ee709c804409fb16a207ba1650174d4 105 Pfam PF06305 Lipopolysaccharide assembly protein A domain 22 84 4.4E-18 T 01-11-2018 IPR010445 Lipopolysaccharide assembly protein A domain GO:0005887 CDA09_12620 6ccdab4f1a8bc484aa0263efa43c642f 474 SUPERFAMILY SSF103473 20 469 1.4E-57 T 01-11-2018 IPR036259 MFS transporter superfamily CDA09_12620 6ccdab4f1a8bc484aa0263efa43c642f 474 Gene3D G3DSA:1.20.1250.20 283 474 9.1E-21 T 01-11-2018 CDA09_12620 6ccdab4f1a8bc484aa0263efa43c642f 474 Pfam PF07690 Major Facilitator Superfamily 30 423 1.4E-50 T 01-11-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 CDA09_12620 6ccdab4f1a8bc484aa0263efa43c642f 474 Gene3D G3DSA:1.20.1720.10 25 233 9.1E-35 T 01-11-2018 CDA09_11820 50911ef0477c7ab94fadf69883def278 218 Pfam PF13419 Haloacid dehalogenase-like hydrolase 7 183 9.3E-23 T 01-11-2018 CDA09_11820 50911ef0477c7ab94fadf69883def278 218 Gene3D G3DSA:3.40.50.1000 7 193 1.0E-42 T 01-11-2018 IPR023214 HAD superfamily CDA09_11820 50911ef0477c7ab94fadf69883def278 218 SUPERFAMILY SSF56784 2 199 8.81E-38 T 01-11-2018 IPR036412 HAD-like superfamily CDA09_11820 50911ef0477c7ab94fadf69883def278 218 Gene3D G3DSA:1.10.150.240 18 84 1.0E-42 T 01-11-2018 IPR023198 Phosphoglycolate phosphatase-like, domain 2 CDA09_17790 7e244ade9bc5503f133123fa800694d5 241 Pfam PF02104 SURF1 family 20 216 4.0E-32 T 01-11-2018 IPR002994 Surfeit locus 1/Shy1 GO:0016020 Reactome: R-HSA-5628897|Reactome: R-HSA-611105 CDA09_14150 15e4dd654e03a9df90f748352f5e327c 597 SUPERFAMILY SSF52540 1 469 5.52E-18 T 01-11-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CDA09_14150 15e4dd654e03a9df90f748352f5e327c 597 Gene3D G3DSA:3.40.50.300 1 243 6.0E-10 T 01-11-2018 CDA09_14150 15e4dd654e03a9df90f748352f5e327c 597 Gene3D G3DSA:3.40.50.300 274 475 2.7E-8 T 01-11-2018 CDA09_14150 15e4dd654e03a9df90f748352f5e327c 597 Pfam PF13304 AAA domain, putative AbiEii toxin, Type IV TA system 355 453 8.7E-10 T 01-11-2018 IPR003959 ATPase, AAA-type, core GO:0005524 CDA09_12855 205a16923a331e0cc98e8f12d557f4e8 275 Hamap MF_00055 MEMO1 family protein . 5 264 46.911 T 01-11-2018 IPR002737 MEMO1 family Reactome: R-HSA-6785631 CDA09_12855 205a16923a331e0cc98e8f12d557f4e8 275 Gene3D G3DSA:3.40.830.10 4 265 8.4E-59 T 01-11-2018 CDA09_12855 205a16923a331e0cc98e8f12d557f4e8 275 TIGRFAM TIGR04336 AmmeMemoSam_B: AmmeMemoRadiSam system protein B 7 263 1.2E-76 T 01-11-2018 CDA09_12855 205a16923a331e0cc98e8f12d557f4e8 275 Pfam PF01875 Memo-like protein 9 261 7.3E-46 T 01-11-2018 IPR002737 MEMO1 family Reactome: R-HSA-6785631 CDA09_03960 a7608f27dd55ca671eeb8092b9114e88 249 Pfam PF03372 Endonuclease/Exonuclease/phosphatase family 7 238 4.2E-16 T 01-11-2018 IPR005135 Endonuclease/exonuclease/phosphatase CDA09_03960 a7608f27dd55ca671eeb8092b9114e88 249 Gene3D G3DSA:3.60.10.10 2 247 2.3E-43 T 01-11-2018 IPR036691 Endonuclease/exonuclease/phosphatase superfamily CDA09_03960 a7608f27dd55ca671eeb8092b9114e88 249 SUPERFAMILY SSF56219 1 245 9.55E-49 T 01-11-2018 IPR036691 Endonuclease/exonuclease/phosphatase superfamily CDA09_02230 2bf354a84503d78b98182eb1d678f647 636 Pfam PF02705 K+ potassium transporter 27 558 3.9E-210 T 01-11-2018 IPR003855 Potassium transporter GO:0015079|GO:0016020|GO:0071805 CDA09_02230 2bf354a84503d78b98182eb1d678f647 636 Hamap MF_01522 Low affinity potassium transport system protein kup [kup]. 18 636 34.617 T 01-11-2018 IPR023051 Potassium uptake protein, low affinity, Kup CDA09_03360 f435688852b9ec0c468a9cdbd3337579 120 SUPERFAMILY SSF52091 3 112 6.67E-32 T 01-11-2018 IPR036513 STAS domain superfamily CDA09_03360 f435688852b9ec0c468a9cdbd3337579 120 Gene3D G3DSA:3.40.50.10600 1 112 1.7E-28 T 01-11-2018 IPR038396 SpoIIAA-like superfamily CDA09_03360 f435688852b9ec0c468a9cdbd3337579 120 Pfam PF11964 SpoIIAA-like 11 112 1.1E-18 T 01-11-2018 IPR021866 SpoIIAA-like CDA09_16410 f1d6f0e884e18978465b6fa3854f160a 425 Pfam PF08245 Mur ligase middle domain 47 187 7.3E-10 T 01-11-2018 IPR013221 Mur ligase, central GO:0005524|GO:0009058 CDA09_16410 f1d6f0e884e18978465b6fa3854f160a 425 SUPERFAMILY SSF53623 7 284 1.3E-86 T 01-11-2018 IPR036565 Mur-like, catalytic domain superfamily GO:0005524|GO:0009058 Reactome: R-HSA-196757 CDA09_16410 f1d6f0e884e18978465b6fa3854f160a 425 PIRSF PIRSF001563 3 425 3.2E-103 T 01-11-2018 IPR001645 Folylpolyglutamate synthetase GO:0004326|GO:0005524|GO:0009396 KEGG: 00790+6.3.2.17|MetaCyc: PWY-2161|Reactome: R-HSA-196757 CDA09_16410 f1d6f0e884e18978465b6fa3854f160a 425 Gene3D G3DSA:3.40.1190.10 3 287 2.1E-85 T 01-11-2018 IPR036565 Mur-like, catalytic domain superfamily GO:0005524|GO:0009058 Reactome: R-HSA-196757 CDA09_16410 f1d6f0e884e18978465b6fa3854f160a 425 TIGRFAM TIGR01499 folC: bifunctional protein FolC 41 418 9.7E-97 T 01-11-2018 IPR001645 Folylpolyglutamate synthetase GO:0004326|GO:0005524|GO:0009396 KEGG: 00790+6.3.2.17|MetaCyc: PWY-2161|Reactome: R-HSA-196757 CDA09_16410 f1d6f0e884e18978465b6fa3854f160a 425 Gene3D G3DSA:3.90.190.20 288 424 3.3E-29 T 01-11-2018 IPR036615 Mur ligase, C-terminal domain superfamily GO:0005524|GO:0009058|GO:0016874 Reactome: R-HSA-196757 CDA09_16410 f1d6f0e884e18978465b6fa3854f160a 425 SUPERFAMILY SSF53244 286 420 2.9E-27 T 01-11-2018 IPR036615 Mur ligase, C-terminal domain superfamily GO:0005524|GO:0009058|GO:0016874 Reactome: R-HSA-196757 CDA09_13735 146c64c3e0dbf3228ee90535ac50a212 303 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 9 67 5.7E-19 T 01-11-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 CDA09_13735 146c64c3e0dbf3228ee90535ac50a212 303 Gene3D G3DSA:3.40.190.10 97 296 5.3E-46 T 01-11-2018 CDA09_13735 146c64c3e0dbf3228ee90535ac50a212 303 Pfam PF03466 LysR substrate binding domain 94 301 1.9E-44 T 01-11-2018 IPR005119 LysR, substrate-binding CDA09_13735 146c64c3e0dbf3228ee90535ac50a212 303 Gene3D G3DSA:1.10.10.10 3 89 1.3E-25 T 01-11-2018 IPR036388 Winged helix-like DNA-binding domain superfamily CDA09_13735 146c64c3e0dbf3228ee90535ac50a212 303 Gene3D G3DSA:3.40.190.10 169 274 5.3E-46 T 01-11-2018 CDA09_13735 146c64c3e0dbf3228ee90535ac50a212 303 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 24 35 8.2E-7 T 01-11-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 CDA09_13735 146c64c3e0dbf3228ee90535ac50a212 303 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 35 45 8.2E-7 T 01-11-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 CDA09_13735 146c64c3e0dbf3228ee90535ac50a212 303 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 45 56 8.2E-7 T 01-11-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 CDA09_13735 146c64c3e0dbf3228ee90535ac50a212 303 SUPERFAMILY SSF46785 7 117 2.56E-22 T 01-11-2018 IPR036390 Winged helix DNA-binding domain superfamily CDA09_13735 146c64c3e0dbf3228ee90535ac50a212 303 SUPERFAMILY SSF53850 95 302 1.74E-39 T 01-11-2018 CDA09_15440 38ed52ada2c8f602595af866a472da25 101 Pfam PF16290 Domain of unknown function (DUF4936) 11 98 4.8E-25 T 01-11-2018 IPR032556 Protein of unknown function DUF4936 CDA09_19945 6eb30d188803f7b8c648aeb9359f78d5 131 Gene3D G3DSA:3.40.50.12740 10 129 4.6E-23 T 01-11-2018 CDA09_19945 6eb30d188803f7b8c648aeb9359f78d5 131 Pfam PF00072 Response regulator receiver domain 12 124 3.8E-19 T 01-11-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 CDA09_19945 6eb30d188803f7b8c648aeb9359f78d5 131 SUPERFAMILY SSF52172 9 127 6.55E-23 T 01-11-2018 IPR011006 CheY-like superfamily CDA09_19945 6eb30d188803f7b8c648aeb9359f78d5 131 SMART SM00448 10 123 3.1E-14 T 01-11-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 CDA09_05065 5ce014356a3f746dbca86a7881c23896 253 TIGRFAM TIGR00195 exoDNase_III: exodeoxyribonuclease III 1 251 2.3E-78 T 01-11-2018 CDA09_05065 5ce014356a3f746dbca86a7881c23896 253 Pfam PF03372 Endonuclease/Exonuclease/phosphatase family 4 244 3.8E-22 T 01-11-2018 IPR005135 Endonuclease/exonuclease/phosphatase CDA09_05065 5ce014356a3f746dbca86a7881c23896 253 ProSitePatterns PS00728 AP endonucleases family 1 signature 3. 208 219 - T 01-11-2018 IPR020848 AP endonuclease 1, conserved site GO:0003677|GO:0004519|GO:0005622|GO:0006281 Reactome: R-HSA-110357|Reactome: R-HSA-110362|Reactome: R-HSA-110373|Reactome: R-HSA-5651801|Reactome: R-HSA-73930|Reactome: R-HSA-73933 CDA09_05065 5ce014356a3f746dbca86a7881c23896 253 TIGRFAM TIGR00633 xth: exodeoxyribonuclease III (xth) 1 252 5.6E-77 T 01-11-2018 IPR004808 AP endonuclease 1 GO:0004518|GO:0006281 CDA09_05065 5ce014356a3f746dbca86a7881c23896 253 Gene3D G3DSA:3.60.10.10 1 253 1.1E-75 T 01-11-2018 IPR036691 Endonuclease/exonuclease/phosphatase superfamily CDA09_05065 5ce014356a3f746dbca86a7881c23896 253 SUPERFAMILY SSF56219 1 253 1.96E-79 T 01-11-2018 IPR036691 Endonuclease/exonuclease/phosphatase superfamily CDA09_06785 013619a653a8b2319c49228909ccac90 109 Pfam PF04347 Flagellar biosynthesis protein, FliO 17 102 1.5E-20 T 01-11-2018 IPR022781 Flagellar biosynthesis protein, FliO GO:0016021|GO:0044781 CDA09_06785 013619a653a8b2319c49228909ccac90 109 TIGRFAM TIGR03500 FliO_TIGR: flagellar biosynthetic protein FliO 5 71 1.1E-21 T 01-11-2018 IPR022781 Flagellar biosynthesis protein, FliO GO:0016021|GO:0044781 CDA09_19475 f20621df7c6403eacf1ccb2439bb8506 122 SUPERFAMILY SSF50193 1 122 8.37E-51 T 01-11-2018 IPR036853 Ribosomal protein L14 superfamily GO:0003735|GO:0005840|GO:0006412 CDA09_19475 f20621df7c6403eacf1ccb2439bb8506 122 Gene3D G3DSA:2.40.150.20 1 122 2.1E-53 T 01-11-2018 IPR036853 Ribosomal protein L14 superfamily GO:0003735|GO:0005840|GO:0006412 CDA09_19475 f20621df7c6403eacf1ccb2439bb8506 122 Hamap MF_01367 50S ribosomal protein L14 [rplN]. 1 122 26.858 T 01-11-2018 IPR000218 Ribosomal protein L14P GO:0003735|GO:0005840|GO:0006412 CDA09_19475 f20621df7c6403eacf1ccb2439bb8506 122 TIGRFAM TIGR01067 rplN_bact: ribosomal protein uL14 1 122 3.6E-57 T 01-11-2018 IPR005745 Ribosomal protein L14P, bacterial-type GO:0003735|GO:0006412|GO:0015934 CDA09_19475 f20621df7c6403eacf1ccb2439bb8506 122 ProSitePatterns PS00049 Ribosomal protein L14 signature. 60 86 - T 01-11-2018 IPR019972 Ribosomal protein L14P, conserved site Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 CDA09_19475 f20621df7c6403eacf1ccb2439bb8506 122 Pfam PF00238 Ribosomal protein L14p/L23e 1 122 3.9E-54 T 01-11-2018 IPR000218 Ribosomal protein L14P GO:0003735|GO:0005840|GO:0006412 CDA09_19475 f20621df7c6403eacf1ccb2439bb8506 122 SMART SM01374 1 122 6.7E-84 T 01-11-2018 IPR000218 Ribosomal protein L14P GO:0003735|GO:0005840|GO:0006412 CDA09_21630 d38ee36f0f146c3a67908c0f26b08b36 509 Pfam PF07916 TraG-like protein, N-terminal region 10 487 5.1E-99 T 01-11-2018 IPR012931 TraG-like, N-terminal CDA09_17095 c607adbc31ec370b7b750b1071a8a31f 147 PRINTS PR01438 Universal stress protein signature 107 119 7.4E-16 T 01-11-2018 IPR006015 Universal stress protein A CDA09_17095 c607adbc31ec370b7b750b1071a8a31f 147 PRINTS PR01438 Universal stress protein signature 2 20 7.4E-16 T 01-11-2018 IPR006015 Universal stress protein A CDA09_17095 c607adbc31ec370b7b750b1071a8a31f 147 PRINTS PR01438 Universal stress protein signature 125 147 7.4E-16 T 01-11-2018 IPR006015 Universal stress protein A CDA09_17095 c607adbc31ec370b7b750b1071a8a31f 147 SUPERFAMILY SSF52402 2 147 7.79E-31 T 01-11-2018 CDA09_17095 c607adbc31ec370b7b750b1071a8a31f 147 Gene3D G3DSA:3.40.50.620 1 145 1.6E-31 T 01-11-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold CDA09_17095 c607adbc31ec370b7b750b1071a8a31f 147 Pfam PF00582 Universal stress protein family 2 147 7.0E-26 T 01-11-2018 IPR006016 UspA CDA09_02900 4679caabedbba6712c3b988374f13e92 284 Gene3D G3DSA:1.10.3210.10 17 269 4.3E-25 T 01-11-2018 CDA09_02900 4679caabedbba6712c3b988374f13e92 284 SUPERFAMILY SSF109604 18 269 9.1E-34 T 01-11-2018 CDA09_02900 4679caabedbba6712c3b988374f13e92 284 Pfam PF08668 HDOD domain 24 216 7.0E-15 T 01-11-2018 IPR013976 Metal-dependent hydrolase HDOD CDA09_20430 ef45a4cb4ccdee670b0370713c44b1c5 185 Gene3D G3DSA:3.40.1410.10 3 181 1.9E-46 T 01-11-2018 IPR028978 Chorismate pyruvate-lyase/UbiC transcription regulator-associated domain superfamily CDA09_20430 ef45a4cb4ccdee670b0370713c44b1c5 185 Hamap MF_01632 Chorismate pyruvate-lyase [ubiC]. 8 183 27.842 T 01-11-2018 IPR007440 Chorismate--pyruvate lyase GO:0005737|GO:0006744|GO:0008813 KEGG: 00130+4.1.3.40|MetaCyc: PWY-5755|MetaCyc: PWY-5870|MetaCyc: PWY-6148|MetaCyc: PWY-7742|MetaCyc: PWY-7745|MetaCyc: PWY-7929|MetaCyc: PWY-7934|MetaCyc: PWY-7935 CDA09_20430 ef45a4cb4ccdee670b0370713c44b1c5 185 Pfam PF04345 Chorismate lyase 6 180 6.8E-28 T 01-11-2018 IPR007440 Chorismate--pyruvate lyase GO:0005737|GO:0006744|GO:0008813 KEGG: 00130+4.1.3.40|MetaCyc: PWY-5755|MetaCyc: PWY-5870|MetaCyc: PWY-6148|MetaCyc: PWY-7742|MetaCyc: PWY-7745|MetaCyc: PWY-7929|MetaCyc: PWY-7934|MetaCyc: PWY-7935 CDA09_20430 ef45a4cb4ccdee670b0370713c44b1c5 185 SUPERFAMILY SSF64288 10 180 9.1E-44 T 01-11-2018 IPR028978 Chorismate pyruvate-lyase/UbiC transcription regulator-associated domain superfamily CDA09_07585 e1ec7802b2b8869c13e0ea0fddeccafa 465 SUPERFAMILY SSF48695 76 265 1.13E-17 T 01-11-2018 IPR036280 Multiheme cytochrome superfamily CDA09_07585 e1ec7802b2b8869c13e0ea0fddeccafa 465 Gene3D G3DSA:3.90.10.10 119 247 1.8E-5 T 01-11-2018 CDA09_07585 e1ec7802b2b8869c13e0ea0fddeccafa 465 Pfam PF14522 Cytochrome c7 and related cytochrome c 138 223 6.7E-6 T 01-11-2018 IPR029467 C-type polyheme cytochrome OmcB CDA09_13245 d04fd8b434360eb4e6f2ec3536072708 297 Gene3D G3DSA:2.60.200.20 182 290 4.9E-15 T 01-11-2018 CDA09_13245 d04fd8b434360eb4e6f2ec3536072708 297 Gene3D G3DSA:3.30.70.1230 5 176 9.4E-41 T 01-11-2018 IPR029787 Nucleotide cyclase CDA09_13245 d04fd8b434360eb4e6f2ec3536072708 297 SUPERFAMILY SSF55073 7 172 1.0E-37 T 01-11-2018 IPR029787 Nucleotide cyclase CDA09_13245 d04fd8b434360eb4e6f2ec3536072708 297 Pfam PF00498 FHA domain 214 280 2.5E-10 T 01-11-2018 IPR000253 Forkhead-associated (FHA) domain GO:0005515 CDA09_13245 d04fd8b434360eb4e6f2ec3536072708 297 Pfam PF00211 Adenylate and Guanylate cyclase catalytic domain 9 161 3.4E-11 T 01-11-2018 IPR001054 Adenylyl cyclase class-3/4/guanylyl cyclase GO:0009190|GO:0016849|GO:0035556 CDA09_13245 d04fd8b434360eb4e6f2ec3536072708 297 SMART SM00240 212 263 4.0E-4 T 01-11-2018 IPR000253 Forkhead-associated (FHA) domain GO:0005515 CDA09_13245 d04fd8b434360eb4e6f2ec3536072708 297 SUPERFAMILY SSF49879 200 284 4.02E-15 T 01-11-2018 IPR008984 SMAD/FHA domain superfamily GO:0005515 CDA09_00200 713329929e4dc8fcccf9eeff2fc86048 231 Pfam PF01292 Prokaryotic cytochrome b561 10 179 1.4E-14 T 01-11-2018 IPR011577 Cytochrome b561, bacterial/Ni-hydrogenase GO:0009055|GO:0016021 CDA09_00200 713329929e4dc8fcccf9eeff2fc86048 231 Gene3D G3DSA:1.20.950.20 2 169 6.5E-11 T 01-11-2018 CDA09_00200 713329929e4dc8fcccf9eeff2fc86048 231 SUPERFAMILY SSF81342 4 185 2.59E-31 T 01-11-2018 IPR016174 Di-haem cytochrome, transmembrane GO:0016020|GO:0022904 Reactome: R-HSA-611105 CDA09_10565 4104891e1401a6879d90321f85c427bc 387 Pfam PF13458 Periplasmic binding protein 33 381 3.1E-65 T 01-11-2018 IPR028081 Leucine-binding protein domain CDA09_10565 4104891e1401a6879d90321f85c427bc 387 PRINTS PR00337 Leu/Ile/Val-binding protein family signature 75 93 3.8E-11 T 01-11-2018 IPR000709 Leu/Ile/Val-binding protein GO:0006865 CDA09_10565 4104891e1401a6879d90321f85c427bc 387 PRINTS PR00337 Leu/Ile/Val-binding protein family signature 56 72 3.8E-11 T 01-11-2018 IPR000709 Leu/Ile/Val-binding protein GO:0006865 CDA09_10565 4104891e1401a6879d90321f85c427bc 387 PRINTS PR00337 Leu/Ile/Val-binding protein family signature 261 279 3.8E-11 T 01-11-2018 IPR000709 Leu/Ile/Val-binding protein GO:0006865 CDA09_10565 4104891e1401a6879d90321f85c427bc 387 PRINTS PR00337 Leu/Ile/Val-binding protein family signature 34 50 3.8E-11 T 01-11-2018 IPR000709 Leu/Ile/Val-binding protein GO:0006865 CDA09_10565 4104891e1401a6879d90321f85c427bc 387 Gene3D G3DSA:3.40.50.2300 154 378 4.2E-103 T 01-11-2018 CDA09_10565 4104891e1401a6879d90321f85c427bc 387 SUPERFAMILY SSF53822 33 386 2.94E-84 T 01-11-2018 IPR028082 Periplasmic binding protein-like I CDA09_10565 4104891e1401a6879d90321f85c427bc 387 Gene3D G3DSA:3.40.50.2300 36 369 4.2E-103 T 01-11-2018 CDA09_19700 26429aabb779a5896fe4b20d33a122d6 283 SUPERFAMILY SSF161098 78 266 6.28E-31 T 01-11-2018 IPR035906 MetI-like superfamily CDA09_19700 26429aabb779a5896fe4b20d33a122d6 283 Gene3D G3DSA:1.10.3720.10 80 270 6.3E-23 T 01-11-2018 IPR035906 MetI-like superfamily CDA09_19700 26429aabb779a5896fe4b20d33a122d6 283 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 102 257 4.4E-23 T 01-11-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 CDA09_13465 1cde029a59c913d3f990eec4b2d99a33 477 SUPERFAMILY SSF56672 26 229 1.38E-28 T 01-11-2018 CDA09_13465 1cde029a59c913d3f990eec4b2d99a33 477 Pfam PF00817 impB/mucB/samB family 27 146 1.8E-6 T 01-11-2018 IPR001126 UmuC domain GO:0006281 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7|Reactome: R-HSA-5656169 CDA09_18395 96c4d6619169979e4feda077edc075d7 297 SUPERFAMILY SSF51735 1 293 4.08E-65 T 01-11-2018 IPR036291 NAD(P)-binding domain superfamily CDA09_18395 96c4d6619169979e4feda077edc075d7 297 Gene3D G3DSA:3.40.50.720 4 281 6.3E-91 T 01-11-2018 CDA09_18395 96c4d6619169979e4feda077edc075d7 297 Pfam PF16363 GDP-mannose 4,6 dehydratase 5 277 1.3E-42 T 01-11-2018 IPR016040 NAD(P)-binding domain CDA09_18395 96c4d6619169979e4feda077edc075d7 297 Gene3D G3DSA:3.90.25.10 170 288 6.3E-91 T 01-11-2018 CDA09_02735 cdc0d7a89108288ee9d14c61a77d4529 758 Pfam PF01515 Phosphate acetyl/butaryl transferase 429 750 1.3E-85 T 01-11-2018 IPR002505 Phosphate acetyl/butaryl transferase GO:0016746 KEGG: 00430+2.3.1.8|KEGG: 00620+2.3.1.8|KEGG: 00640+2.3.1.8|KEGG: 00680+2.3.1.8|KEGG: 00720+2.3.1.8|MetaCyc: PWY-1281|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497|MetaCyc: PWY-6637 CDA09_02735 cdc0d7a89108288ee9d14c61a77d4529 758 Gene3D G3DSA:3.40.50.10380 1 160 3.4E-66 T 01-11-2018 IPR037062 Malic enzyme, N-terminal domain superfamily GO:0004471|GO:0055114 CDA09_02735 cdc0d7a89108288ee9d14c61a77d4529 758 PIRSF PIRSF036684 1 758 0.0 T 01-11-2018 IPR012188 NAD(P)-dependent malic enzyme GO:0004470|GO:0006108|GO:0046872 KEGG: 00620+1.1.1.40|KEGG: 00710+1.1.1.40|MetaCyc: PWY-241|MetaCyc: PWY-7117 CDA09_02735 cdc0d7a89108288ee9d14c61a77d4529 758 SUPERFAMILY SSF51735 163 452 1.54E-82 T 01-11-2018 IPR036291 NAD(P)-binding domain superfamily CDA09_02735 cdc0d7a89108288ee9d14c61a77d4529 758 SUPERFAMILY SSF53223 10 161 1.94E-51 T 01-11-2018 CDA09_02735 cdc0d7a89108288ee9d14c61a77d4529 758 Gene3D G3DSA:3.40.50.10950 444 750 1.3E-84 T 01-11-2018 CDA09_02735 cdc0d7a89108288ee9d14c61a77d4529 758 Gene3D G3DSA:3.40.50.10750 572 726 1.3E-84 T 01-11-2018 CDA09_02735 cdc0d7a89108288ee9d14c61a77d4529 758 Pfam PF03949 Malic enzyme, NAD binding domain 165 359 1.7E-20 T 01-11-2018 IPR012302 Malic enzyme, NAD-binding GO:0051287 CDA09_02735 cdc0d7a89108288ee9d14c61a77d4529 758 SMART SM01274 18 151 6.7E-75 T 01-11-2018 IPR012301 Malic enzyme, N-terminal domain GO:0004471|GO:0055114 CDA09_02735 cdc0d7a89108288ee9d14c61a77d4529 758 Pfam PF00390 Malic enzyme, N-terminal domain 19 151 3.5E-26 T 01-11-2018 IPR012301 Malic enzyme, N-terminal domain GO:0004471|GO:0055114 CDA09_02735 cdc0d7a89108288ee9d14c61a77d4529 758 SMART SM00919 163 400 2.4E-132 T 01-11-2018 IPR012302 Malic enzyme, NAD-binding GO:0051287 CDA09_02735 cdc0d7a89108288ee9d14c61a77d4529 758 SUPERFAMILY SSF53659 429 754 2.55E-81 T 01-11-2018 CDA09_02735 cdc0d7a89108288ee9d14c61a77d4529 758 Gene3D G3DSA:3.40.50.720 161 443 2.2E-78 T 01-11-2018 CDA09_14585 6a476dec479260780b49cfadf8d0c0bd 611 Pfam PF00391 PEP-utilising enzyme, mobile domain 534 605 5.9E-24 T 01-11-2018 IPR008279 PEP-utilising enzyme, mobile domain GO:0016310|GO:0016772 CDA09_14585 6a476dec479260780b49cfadf8d0c0bd 611 SUPERFAMILY SSF52009 508 608 1.44E-30 T 01-11-2018 IPR036637 Phosphohistidine domain superfamily GO:0016310|GO:0016772 CDA09_14585 6a476dec479260780b49cfadf8d0c0bd 611 Gene3D G3DSA:3.50.30.10 507 610 7.3E-34 T 01-11-2018 CDA09_08995 1edf539d8576fee900d094c6f6962fc3 212 Gene3D G3DSA:2.60.40.1190 1 211 9.4E-53 T 01-11-2018 CDA09_08995 1edf539d8576fee900d094c6f6962fc3 212 SMART SM00887 18 200 0.001 T 01-11-2018 IPR019020 Cytochrome c-552/DMSO reductase-like, haem-binding domain GO:0020037 CDA09_08995 1edf539d8576fee900d094c6f6962fc3 212 Pfam PF09459 Ethylbenzene dehydrogenase 145 199 2.0E-12 T 01-11-2018 IPR019020 Cytochrome c-552/DMSO reductase-like, haem-binding domain GO:0020037 CDA09_09440 8095c7b5052b22a3b51194c834989943 191 Gene3D G3DSA:2.60.200.60 17 86 4.1E-14 T 01-11-2018 CDA09_09440 8095c7b5052b22a3b51194c834989943 191 Pfam PF05488 PAAR motif 8 81 1.3E-24 T 01-11-2018 IPR008727 PAAR motif CDA09_15025 6c98e9ed9fb690c1fdebdcf11913bafb 400 Gene3D G3DSA:1.10.443.10 202 383 2.4E-24 T 01-11-2018 IPR013762 Integrase-like, catalytic domain superfamily GO:0003677|GO:0006310|GO:0015074 CDA09_15025 6c98e9ed9fb690c1fdebdcf11913bafb 400 SUPERFAMILY SSF56349 98 378 7.06E-58 T 01-11-2018 IPR011010 DNA breaking-rejoining enzyme, catalytic core GO:0003677 CDA09_15025 6c98e9ed9fb690c1fdebdcf11913bafb 400 Pfam PF00589 Phage integrase family 205 370 2.0E-17 T 01-11-2018 IPR002104 Integrase, catalytic domain GO:0003677|GO:0006310|GO:0015074 CDA09_15025 6c98e9ed9fb690c1fdebdcf11913bafb 400 Pfam PF14659 Phage integrase, N-terminal SAM-like domain 99 151 7.8E-8 T 01-11-2018 IPR004107 Integrase, SAM-like, N-terminal GO:0003677|GO:0015074 CDA09_15025 6c98e9ed9fb690c1fdebdcf11913bafb 400 Gene3D G3DSA:3.30.160.390 4 93 1.0E-8 T 01-11-2018 IPR038488 Integrase, DNA-binding domain superfamily CDA09_15025 6c98e9ed9fb690c1fdebdcf11913bafb 400 Pfam PF13356 Arm DNA-binding domain 6 91 1.8E-15 T 01-11-2018 IPR025166 Integrase, DNA-binding domain CDA09_15025 6c98e9ed9fb690c1fdebdcf11913bafb 400 Gene3D G3DSA:1.10.150.130 94 201 2.8E-20 T 01-11-2018 IPR010998 Integrase/recombinase, N-terminal CDA09_18525 ffd7480dfca0374f1d0cec9300ba6edc 278 TIGRFAM TIGR00097 HMP-P_kinase: hydroxymethylpyrimidine kinase/phosphomethylpyrimidine kinase 8 272 8.1E-88 T 01-11-2018 IPR004399 Hydroxymethylpyrimidine kinase/phosphomethylpyrimidine kinase GO:0008972|GO:0009228 KEGG: 00730+2.7.1.49|MetaCyc: PWY-6910|MetaCyc: PWY-7356|MetaCyc: PWY-7357 CDA09_18525 ffd7480dfca0374f1d0cec9300ba6edc 278 SUPERFAMILY SSF53613 5 276 7.33E-74 T 01-11-2018 IPR029056 Ribokinase-like CDA09_18525 ffd7480dfca0374f1d0cec9300ba6edc 278 Gene3D G3DSA:3.40.1190.20 1 277 1.5E-96 T 01-11-2018 IPR029056 Ribokinase-like CDA09_18525 ffd7480dfca0374f1d0cec9300ba6edc 278 Pfam PF08543 Phosphomethylpyrimidine kinase 15 270 1.1E-84 T 01-11-2018 IPR013749 Pyridoxamine kinase/Phosphomethylpyrimidine kinase Reactome: R-HSA-6798695|Reactome: R-HSA-964975 CDA09_12030 23e4ebd333892e00d59e2b68440f9be6 219 Gene3D G3DSA:3.30.1020.10 155 218 4.7E-27 T 01-11-2018 CDA09_12030 23e4ebd333892e00d59e2b68440f9be6 219 PIRSF PIRSF000239 1 217 7.5E-81 T 01-11-2018 IPR024706 Peroxiredoxin, AhpC-type KEGG: 00480+1.11.1.15|Reactome: R-HSA-3299685 CDA09_12030 23e4ebd333892e00d59e2b68440f9be6 219 Pfam PF00578 AhpC/TSA family 6 143 2.4E-30 T 01-11-2018 IPR000866 Alkyl hydroperoxide reductase subunit C/ Thiol specific antioxidant GO:0016209|GO:0016491|GO:0055114 KEGG: 00480+1.11.1.15|Reactome: R-HSA-3299685 CDA09_12030 23e4ebd333892e00d59e2b68440f9be6 219 Gene3D G3DSA:3.40.30.10 1 154 4.5E-51 T 01-11-2018 CDA09_12030 23e4ebd333892e00d59e2b68440f9be6 219 SUPERFAMILY SSF52833 3 217 7.11E-72 T 01-11-2018 IPR036249 Thioredoxin-like superfamily CDA09_12030 23e4ebd333892e00d59e2b68440f9be6 219 Pfam PF10417 C-terminal domain of 1-Cys peroxiredoxin 165 204 9.7E-15 T 01-11-2018 IPR019479 Peroxiredoxin, C-terminal GO:0051920|GO:0055114 KEGG: 00480+1.11.1.15|Reactome: R-HSA-3299685 CDA09_20900 bba097294bda53786b87a0bc3056a2d1 268 Pfam PF12697 Alpha/beta hydrolase family 26 257 6.9E-26 T 01-11-2018 IPR000073 Alpha/beta hydrolase fold-1 CDA09_20900 bba097294bda53786b87a0bc3056a2d1 268 SUPERFAMILY SSF53474 16 263 2.2E-38 T 01-11-2018 IPR029058 Alpha/Beta hydrolase fold CDA09_20900 bba097294bda53786b87a0bc3056a2d1 268 Gene3D G3DSA:3.40.50.1820 16 264 1.7E-39 T 01-11-2018 IPR029058 Alpha/Beta hydrolase fold CDA09_18905 f3f2b4deab6bf825c792d21ee207ed00 266 ProSitePatterns PS01311 Prolipoprotein diacylglyceryl transferase signature. 139 151 - T 01-11-2018 IPR001640 Prolipoprotein diacylglyceryl transferase GO:0016020|GO:0016757|GO:0042158 CDA09_18905 f3f2b4deab6bf825c792d21ee207ed00 266 Hamap MF_01147 Prolipoprotein diacylglyceryl transferase [lgt]. 6 262 19.046 T 01-11-2018 IPR001640 Prolipoprotein diacylglyceryl transferase GO:0016020|GO:0016757|GO:0042158 CDA09_18905 f3f2b4deab6bf825c792d21ee207ed00 266 TIGRFAM TIGR00544 lgt: prolipoprotein diacylglyceryl transferase 4 257 7.6E-77 T 01-11-2018 IPR001640 Prolipoprotein diacylglyceryl transferase GO:0016020|GO:0016757|GO:0042158 CDA09_18905 f3f2b4deab6bf825c792d21ee207ed00 266 Pfam PF01790 Prolipoprotein diacylglyceryl transferase 9 256 3.7E-77 T 01-11-2018 IPR001640 Prolipoprotein diacylglyceryl transferase GO:0016020|GO:0016757|GO:0042158 CDA09_09760 4d62c769b099e77710c85997854208c9 606 Pfam PF10592 AIPR protein 256 495 2.1E-37 T 01-11-2018 IPR018891 Abortive bacteriophage infection, resistance CDA09_21090 51b690ef59bda10d197131ba535baa66 156 Pfam PF05232 Chlorhexidine efflux transporter 9 72 1.6E-19 T 01-11-2018 IPR007896 Chlorhexidine efflux transporter CDA09_21090 51b690ef59bda10d197131ba535baa66 156 Pfam PF05232 Chlorhexidine efflux transporter 81 143 6.4E-22 T 01-11-2018 IPR007896 Chlorhexidine efflux transporter CDA09_21625 7509fab8a3272255d8ce79971ce0da07 122 Pfam PF12553 Protein of unknown function (DUF3742) 1 120 2.4E-40 T 01-11-2018 IPR022213 Protein of unknown function DUF3742 CDA09_11995 655d09fd2d9a5b6eee5095806575ea01 836 Gene3D G3DSA:3.30.565.10 679 831 1.7E-44 T 01-11-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily CDA09_11995 655d09fd2d9a5b6eee5095806575ea01 836 Pfam PF02743 Cache domain 106 374 6.8E-20 T 01-11-2018 IPR033479 Double Cache domain 1 CDA09_11995 655d09fd2d9a5b6eee5095806575ea01 836 SMART SM00304 411 463 1.4E-14 T 01-11-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 CDA09_11995 655d09fd2d9a5b6eee5095806575ea01 836 SUPERFAMILY SSF55785 479 587 2.33E-9 T 01-11-2018 IPR035965 PAS domain superfamily CDA09_11995 655d09fd2d9a5b6eee5095806575ea01 836 SMART SM00091 488 554 9.8E-6 T 01-11-2018 IPR000014 PAS domain CDA09_11995 655d09fd2d9a5b6eee5095806575ea01 836 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 486 594 3.0E-7 T 01-11-2018 IPR000014 PAS domain CDA09_11995 655d09fd2d9a5b6eee5095806575ea01 836 Gene3D G3DSA:1.20.1480.50 374 468 2.8E-9 T 01-11-2018 CDA09_11995 655d09fd2d9a5b6eee5095806575ea01 836 SUPERFAMILY SSF55874 664 827 5.63E-42 T 01-11-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily CDA09_11995 655d09fd2d9a5b6eee5095806575ea01 836 SUPERFAMILY SSF158472 411 461 7.32E-9 T 01-11-2018 CDA09_11995 655d09fd2d9a5b6eee5095806575ea01 836 Gene3D G3DSA:3.30.450.20 153 284 1.9E-37 T 01-11-2018 CDA09_11995 655d09fd2d9a5b6eee5095806575ea01 836 Gene3D G3DSA:3.30.450.20 476 591 2.1E-12 T 01-11-2018 CDA09_11995 655d09fd2d9a5b6eee5095806575ea01 836 Gene3D G3DSA:1.10.287.130 592 672 5.8E-13 T 01-11-2018 CDA09_11995 655d09fd2d9a5b6eee5095806575ea01 836 Pfam PF00672 HAMP domain 411 459 1.1E-11 T 01-11-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 CDA09_11995 655d09fd2d9a5b6eee5095806575ea01 836 PRINTS PR00344 Bacterial sensor protein C-terminal signature 756 770 7.6E-16 T 01-11-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 CDA09_11995 655d09fd2d9a5b6eee5095806575ea01 836 PRINTS PR00344 Bacterial sensor protein C-terminal signature 774 784 7.6E-16 T 01-11-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 CDA09_11995 655d09fd2d9a5b6eee5095806575ea01 836 PRINTS PR00344 Bacterial sensor protein C-terminal signature 785 803 7.6E-16 T 01-11-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 CDA09_11995 655d09fd2d9a5b6eee5095806575ea01 836 PRINTS PR00344 Bacterial sensor protein C-terminal signature 809 822 7.6E-16 T 01-11-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 CDA09_11995 655d09fd2d9a5b6eee5095806575ea01 836 SMART SM00387 719 825 1.0E-35 T 01-11-2018 IPR003594 Histidine kinase/HSP90-like ATPase CDA09_11995 655d09fd2d9a5b6eee5095806575ea01 836 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 720 822 3.3E-22 T 01-11-2018 IPR003594 Histidine kinase/HSP90-like ATPase CDA09_11995 655d09fd2d9a5b6eee5095806575ea01 836 Pfam PF00512 His Kinase A (phospho-acceptor) domain 612 666 7.2E-7 T 01-11-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 CDA09_11995 655d09fd2d9a5b6eee5095806575ea01 836 SUPERFAMILY SSF103190 109 284 1.41E-38 T 01-11-2018 IPR029151 Periplasmic sensor-like domain superfamily CDA09_11995 655d09fd2d9a5b6eee5095806575ea01 836 SMART SM00388 611 677 1.5E-6 T 01-11-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 CDA09_11995 655d09fd2d9a5b6eee5095806575ea01 836 Pfam PF00989 PAS fold 491 551 1.2E-6 T 01-11-2018 IPR013767 PAS fold GO:0006355 CDA09_11995 655d09fd2d9a5b6eee5095806575ea01 836 SUPERFAMILY SSF47384 607 673 6.47E-8 T 01-11-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 CDA09_13700 6d6f24384f805eb7014599ffcb13994c 313 SUPERFAMILY SSF54593 1 265 3.77E-26 T 01-11-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase CDA09_13700 6d6f24384f805eb7014599ffcb13994c 313 Pfam PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily 147 261 1.5E-8 T 01-11-2018 IPR004360 Glyoxalase/fosfomycin resistance/dioxygenase domain CDA09_13700 6d6f24384f805eb7014599ffcb13994c 313 Gene3D G3DSA:3.10.180.10 135 295 5.9E-31 T 01-11-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase CDA09_13700 6d6f24384f805eb7014599ffcb13994c 313 ProSitePatterns PS00082 Extradiol ring-cleavage dioxygenases signature. 240 261 - T 01-11-2018 IPR000486 Extradiol ring-cleavage dioxygenase, class I /II GO:0003824|GO:0006725|GO:0008198|GO:0055114 CDA09_13700 6d6f24384f805eb7014599ffcb13994c 313 Gene3D G3DSA:3.10.180.10 1 130 6.1E-36 T 01-11-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase CDA09_12555 7658ec5b8c03b2721cffc579ac8cb66b 228 Gene3D G3DSA:3.40.50.300 7 228 4.4E-65 T 01-11-2018 CDA09_12555 7658ec5b8c03b2721cffc579ac8cb66b 228 Pfam PF00005 ABC transporter 29 177 1.4E-30 T 01-11-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 CDA09_12555 7658ec5b8c03b2721cffc579ac8cb66b 228 TIGRFAM TIGR02211 LolD_lipo_ex: lipoprotein releasing system, ATP-binding protein 9 227 1.3E-100 T 01-11-2018 IPR011924 Lipoprotein releasing system, ATP-binding protein GO:0005524|GO:0016020|GO:0044873 CDA09_12555 7658ec5b8c03b2721cffc579ac8cb66b 228 ProSitePatterns PS00211 ABC transporters family signature. 150 164 - T 01-11-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 CDA09_12555 7658ec5b8c03b2721cffc579ac8cb66b 228 SUPERFAMILY SSF52540 10 228 1.31E-66 T 01-11-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CDA09_12555 7658ec5b8c03b2721cffc579ac8cb66b 228 SMART SM00382 38 226 1.3E-13 T 01-11-2018 IPR003593 AAA+ ATPase domain CDA09_12735 dca4aed2d1a2df453974dcefa4f74fea 99 SUPERFAMILY SSF54909 1 97 6.61E-29 T 01-11-2018 IPR011008 Dimeric alpha-beta barrel CDA09_12735 dca4aed2d1a2df453974dcefa4f74fea 99 Pfam PF03795 YCII-related domain 1 90 2.3E-24 T 01-11-2018 IPR005545 YCII-related CDA09_12735 dca4aed2d1a2df453974dcefa4f74fea 99 Gene3D G3DSA:3.30.70.1060 1 98 9.4E-33 T 01-11-2018 CDA09_00415 df633c632842507727b72cf0af3856f4 226 Gene3D G3DSA:1.10.3720.10 2 223 3.9E-50 T 01-11-2018 IPR035906 MetI-like superfamily CDA09_00415 df633c632842507727b72cf0af3856f4 226 TIGRFAM TIGR01726 HEQRo_perm_3TM: amino ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family 13 117 1.5E-21 T 01-11-2018 IPR010065 Amino acid ABC transporter, permease protein, 3-TM domain GO:0016021|GO:0022857|GO:0043190|GO:0071705 CDA09_00415 df633c632842507727b72cf0af3856f4 226 SUPERFAMILY SSF161098 15 216 1.26E-40 T 01-11-2018 IPR035906 MetI-like superfamily CDA09_00415 df633c632842507727b72cf0af3856f4 226 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 34 222 5.7E-16 T 01-11-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 CDA09_01485 cef7ef3a481197ec3a07f372b4df0c81 692 Gene3D G3DSA:1.25.40.10 578 691 4.2E-21 T 01-11-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 CDA09_01485 cef7ef3a481197ec3a07f372b4df0c81 692 Gene3D G3DSA:1.25.40.10 423 505 5.1E-19 T 01-11-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 CDA09_01485 cef7ef3a481197ec3a07f372b4df0c81 692 Pfam PF13432 Tetratricopeptide repeat 475 531 1.2E-5 T 01-11-2018 CDA09_01485 cef7ef3a481197ec3a07f372b4df0c81 692 Pfam PF13432 Tetratricopeptide repeat 613 676 4.5E-8 T 01-11-2018 CDA09_01485 cef7ef3a481197ec3a07f372b4df0c81 692 Pfam PF00515 Tetratricopeptide repeat 579 606 5.6E-7 T 01-11-2018 IPR001440 Tetratricopeptide repeat 1 GO:0005515 CDA09_01485 cef7ef3a481197ec3a07f372b4df0c81 692 Pfam PF00515 Tetratricopeptide repeat 437 468 2.9E-7 T 01-11-2018 IPR001440 Tetratricopeptide repeat 1 GO:0005515 CDA09_01485 cef7ef3a481197ec3a07f372b4df0c81 692 SMART SM00028 437 470 3.0E-6 T 01-11-2018 IPR019734 Tetratricopeptide repeat GO:0005515 CDA09_01485 cef7ef3a481197ec3a07f372b4df0c81 692 SMART SM00028 643 676 0.0027 T 01-11-2018 IPR019734 Tetratricopeptide repeat GO:0005515 CDA09_01485 cef7ef3a481197ec3a07f372b4df0c81 692 SMART SM00028 609 642 29.0 T 01-11-2018 IPR019734 Tetratricopeptide repeat GO:0005515 CDA09_01485 cef7ef3a481197ec3a07f372b4df0c81 692 SMART SM00028 575 608 2.7E-5 T 01-11-2018 IPR019734 Tetratricopeptide repeat GO:0005515 CDA09_01485 cef7ef3a481197ec3a07f372b4df0c81 692 SMART SM00028 471 504 0.034 T 01-11-2018 IPR019734 Tetratricopeptide repeat GO:0005515 CDA09_01485 cef7ef3a481197ec3a07f372b4df0c81 692 SMART SM00028 505 538 100.0 T 01-11-2018 IPR019734 Tetratricopeptide repeat GO:0005515 CDA09_01485 cef7ef3a481197ec3a07f372b4df0c81 692 SMART SM00028 539 572 170.0 T 01-11-2018 IPR019734 Tetratricopeptide repeat GO:0005515 CDA09_01485 cef7ef3a481197ec3a07f372b4df0c81 692 SUPERFAMILY SSF48452 417 677 1.25E-33 T 01-11-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 CDA09_01485 cef7ef3a481197ec3a07f372b4df0c81 692 Gene3D G3DSA:1.25.40.10 506 577 6.6E-8 T 01-11-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 CDA09_10990 5b23e2b66a91a1b2de597ebde94fcd82 108 Pfam PF05437 Branched-chain amino acid transport protein (AzlD) 7 103 5.5E-10 T 01-11-2018 IPR008407 Branched-chain amino acid transport, AzlD CDA09_06340 2c04b47cfd518bff990559ba943a66e8 516 SUPERFAMILY SSF53649 39 516 2.49E-147 T 01-11-2018 IPR017850 Alkaline-phosphatase-like, core domain superfamily GO:0003824 CDA09_06340 2c04b47cfd518bff990559ba943a66e8 516 PRINTS PR00113 Alkaline phosphatase signature 119 134 2.2E-45 T 01-11-2018 IPR001952 Alkaline phosphatase GO:0016791 KEGG: 00730+3.1.3.1|KEGG: 00790+3.1.3.1|MetaCyc: PWY-5083|MetaCyc: PWY-5491 CDA09_06340 2c04b47cfd518bff990559ba943a66e8 516 PRINTS PR00113 Alkaline phosphatase signature 320 349 2.2E-45 T 01-11-2018 IPR001952 Alkaline phosphatase GO:0016791 KEGG: 00730+3.1.3.1|KEGG: 00790+3.1.3.1|MetaCyc: PWY-5083|MetaCyc: PWY-5491 CDA09_06340 2c04b47cfd518bff990559ba943a66e8 516 PRINTS PR00113 Alkaline phosphatase signature 229 239 2.2E-45 T 01-11-2018 IPR001952 Alkaline phosphatase GO:0016791 KEGG: 00730+3.1.3.1|KEGG: 00790+3.1.3.1|MetaCyc: PWY-5083|MetaCyc: PWY-5491 CDA09_06340 2c04b47cfd518bff990559ba943a66e8 516 PRINTS PR00113 Alkaline phosphatase signature 168 188 2.2E-45 T 01-11-2018 IPR001952 Alkaline phosphatase GO:0016791 KEGG: 00730+3.1.3.1|KEGG: 00790+3.1.3.1|MetaCyc: PWY-5083|MetaCyc: PWY-5491 CDA09_06340 2c04b47cfd518bff990559ba943a66e8 516 PRINTS PR00113 Alkaline phosphatase signature 63 83 2.2E-45 T 01-11-2018 IPR001952 Alkaline phosphatase GO:0016791 KEGG: 00730+3.1.3.1|KEGG: 00790+3.1.3.1|MetaCyc: PWY-5083|MetaCyc: PWY-5491 CDA09_06340 2c04b47cfd518bff990559ba943a66e8 516 SMART SM00098 64 516 4.7E-159 T 01-11-2018 IPR001952 Alkaline phosphatase GO:0016791 KEGG: 00730+3.1.3.1|KEGG: 00790+3.1.3.1|MetaCyc: PWY-5083|MetaCyc: PWY-5491 CDA09_06340 2c04b47cfd518bff990559ba943a66e8 516 Gene3D G3DSA:3.40.720.10 33 516 3.4E-179 T 01-11-2018 IPR017849 Alkaline phosphatase-like, alpha/beta/alpha GO:0003824 CDA09_06340 2c04b47cfd518bff990559ba943a66e8 516 Pfam PF00245 Alkaline phosphatase 63 514 6.8E-129 T 01-11-2018 IPR001952 Alkaline phosphatase GO:0016791 KEGG: 00730+3.1.3.1|KEGG: 00790+3.1.3.1|MetaCyc: PWY-5083|MetaCyc: PWY-5491 CDA09_10355 b25f69bb6929767509bbc277548fce7d 65 Gene3D G3DSA:1.20.120.520 1 36 6.2E-7 T 01-11-2018 CDA09_08245 de86d8ef21923b2d3eb41462a7a67034 144 SUPERFAMILY SSF57716 105 141 1.57E-7 T 01-11-2018 CDA09_08245 de86d8ef21923b2d3eb41462a7a67034 144 TIGRFAM TIGR02420 dksA: RNA polymerase-binding protein DksA 26 135 9.2E-38 T 01-11-2018 IPR012784 RNA polymerase-binding transcription factor DksA GO:0008270 CDA09_08245 de86d8ef21923b2d3eb41462a7a67034 144 Pfam PF01258 Prokaryotic dksA/traR C4-type zinc finger 103 137 3.1E-8 T 01-11-2018 IPR000962 Zinc finger, DksA/TraR C4-type GO:0008270 CDA09_08245 de86d8ef21923b2d3eb41462a7a67034 144 SUPERFAMILY SSF109635 12 103 1.7E-27 T 01-11-2018 IPR037187 DksA, N-terminal domain superfamily CDA09_08245 de86d8ef21923b2d3eb41462a7a67034 144 ProSitePatterns PS01102 Prokaryotic dksA C4-type zinc finger. 108 132 - T 01-11-2018 IPR020458 Zinc finger, DksA/TraR C4-type conserved site CDA09_08245 de86d8ef21923b2d3eb41462a7a67034 144 Gene3D G3DSA:1.20.120.910 11 143 6.5E-37 T 01-11-2018 CDA09_19915 f4c3097fcbcc4611093b2355f9ae2723 338 Pfam PF03308 ArgK protein 31 299 4.1E-106 T 01-11-2018 CDA09_19915 f4c3097fcbcc4611093b2355f9ae2723 338 Gene3D G3DSA:1.10.287.130 271 332 1.2E-19 T 01-11-2018 CDA09_19915 f4c3097fcbcc4611093b2355f9ae2723 338 TIGRFAM TIGR00750 lao: LAO/AO transport system ATPase 27 327 2.9E-102 T 01-11-2018 IPR005129 SIMIBI class G3E GTPase, ArgK/MeaB GO:0003924|GO:0005525 Reactome: R-HSA-196741|Reactome: R-HSA-3359475|Reactome: R-HSA-3359478|Reactome: R-HSA-71032 CDA09_19915 f4c3097fcbcc4611093b2355f9ae2723 338 Gene3D G3DSA:3.40.50.300 60 270 1.3E-80 T 01-11-2018 CDA09_19915 f4c3097fcbcc4611093b2355f9ae2723 338 Gene3D G3DSA:1.20.5.170 15 59 1.8E-10 T 01-11-2018 CDA09_19915 f4c3097fcbcc4611093b2355f9ae2723 338 SUPERFAMILY SSF52540 19 329 1.15E-89 T 01-11-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CDA09_05535 72a1780302ecfcfb5886d09a1117ab00 139 Pfam PF02566 OsmC-like protein 34 127 2.1E-16 T 01-11-2018 IPR003718 OsmC/Ohr family CDA09_05535 72a1780302ecfcfb5886d09a1117ab00 139 Gene3D G3DSA:3.30.300.20 39 136 4.1E-28 T 01-11-2018 IPR015946 K homology domain-like, alpha/beta CDA09_05535 72a1780302ecfcfb5886d09a1117ab00 139 Gene3D G3DSA:2.20.25.10 1 33 2.8E-10 T 01-11-2018 CDA09_05535 72a1780302ecfcfb5886d09a1117ab00 139 SUPERFAMILY SSF82784 1 137 9.42E-41 T 01-11-2018 IPR036102 OsmC/Ohr superfamily CDA09_03495 9e37833af82ab514a0932dcd342441cf 86 Pfam PF13937 Domain of unknown function (DUF4212) 7 82 2.0E-28 T 01-11-2018 IPR019886 Sodium symporter small subunit, predicted CDA09_03495 9e37833af82ab514a0932dcd342441cf 86 TIGRFAM TIGR03647 Na_symport_sm: putative solute:sodium symporter small subunit 9 84 3.8E-29 T 01-11-2018 IPR019886 Sodium symporter small subunit, predicted CDA09_02815 e90cd1fef21bd681a5ba97103ab18b0b 127 Pfam PF01250 Ribosomal protein S6 3 91 1.2E-28 T 01-11-2018 IPR000529 Ribosomal protein S6 GO:0003735|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 CDA09_02815 e90cd1fef21bd681a5ba97103ab18b0b 127 SUPERFAMILY SSF54995 1 104 7.06E-39 T 01-11-2018 IPR035980 Ribosomal protein S6 superfamily GO:0003735|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 CDA09_02815 e90cd1fef21bd681a5ba97103ab18b0b 127 TIGRFAM TIGR00166 S6: ribosomal protein bS6 1 93 8.9E-35 T 01-11-2018 IPR000529 Ribosomal protein S6 GO:0003735|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 CDA09_02815 e90cd1fef21bd681a5ba97103ab18b0b 127 Hamap MF_00360 30S ribosomal protein S6 [rpsF]. 1 94 22.317 T 01-11-2018 IPR020814 Ribosomal protein S6, plastid/chloroplast GO:0003735|GO:0005840|GO:0006412|GO:0019843 CDA09_02815 e90cd1fef21bd681a5ba97103ab18b0b 127 Gene3D G3DSA:3.30.70.60 1 92 9.3E-34 T 01-11-2018 IPR014717 Translation elongation factor EF1B/ribosomal protein S6 CDA09_17025 7bdcefac126eed60843246a1c8d62999 382 Gene3D G3DSA:3.90.1200.10 145 379 7.2E-84 T 01-11-2018 CDA09_17025 7bdcefac126eed60843246a1c8d62999 382 SUPERFAMILY SSF56112 43 375 2.99E-58 T 01-11-2018 IPR011009 Protein kinase-like domain superfamily CDA09_17025 7bdcefac126eed60843246a1c8d62999 382 Pfam PF01636 Phosphotransferase enzyme family 65 299 5.4E-52 T 01-11-2018 IPR002575 Aminoglycoside phosphotransferase CDA09_17025 7bdcefac126eed60843246a1c8d62999 382 Gene3D G3DSA:3.30.200.20 42 144 1.7E-36 T 01-11-2018 CDA09_03220 4d77a94cc6806d75f64004d804907fac 373 Pfam PF00425 chorismate binding enzyme 111 365 5.6E-90 T 01-11-2018 IPR015890 Chorismate-utilising enzyme, C-terminal CDA09_03220 4d77a94cc6806d75f64004d804907fac 373 PRINTS PR00095 Anthranilate synthase component I signature 305 319 6.5E-12 T 01-11-2018 IPR019999 Anthranilate synthase component I-like GO:0009058 KEGG: 00400+4.1.3.27|KEGG: 00405+4.1.3.27|MetaCyc: PWY-5958|MetaCyc: PWY-6660|MetaCyc: PWY-6661 CDA09_03220 4d77a94cc6806d75f64004d804907fac 373 PRINTS PR00095 Anthranilate synthase component I signature 320 334 6.5E-12 T 01-11-2018 IPR019999 Anthranilate synthase component I-like GO:0009058 KEGG: 00400+4.1.3.27|KEGG: 00405+4.1.3.27|MetaCyc: PWY-5958|MetaCyc: PWY-6660|MetaCyc: PWY-6661 CDA09_03220 4d77a94cc6806d75f64004d804907fac 373 PRINTS PR00095 Anthranilate synthase component I signature 211 224 6.5E-12 T 01-11-2018 IPR019999 Anthranilate synthase component I-like GO:0009058 KEGG: 00400+4.1.3.27|KEGG: 00405+4.1.3.27|MetaCyc: PWY-5958|MetaCyc: PWY-6660|MetaCyc: PWY-6661 CDA09_03220 4d77a94cc6806d75f64004d804907fac 373 PRINTS PR00095 Anthranilate synthase component I signature 225 238 6.5E-12 T 01-11-2018 IPR019999 Anthranilate synthase component I-like GO:0009058 KEGG: 00400+4.1.3.27|KEGG: 00405+4.1.3.27|MetaCyc: PWY-5958|MetaCyc: PWY-6660|MetaCyc: PWY-6661 CDA09_03220 4d77a94cc6806d75f64004d804907fac 373 Gene3D G3DSA:3.60.120.10 33 372 1.1E-120 T 01-11-2018 IPR005801 ADC synthase GO:0009058 CDA09_03220 4d77a94cc6806d75f64004d804907fac 373 SUPERFAMILY SSF56322 45 371 1.57E-112 T 01-11-2018 IPR005801 ADC synthase GO:0009058 CDA09_03220 4d77a94cc6806d75f64004d804907fac 373 TIGRFAM TIGR00553 pabB: aminodeoxychorismate synthase, component I 53 369 6.5E-117 T 01-11-2018 IPR005802 Para-aminobenzoate synthase, component I GO:0009396 KEGG: 00790+2.6.1.85|MetaCyc: PWY-6543 CDA09_18480 3a263687636e3ab6d09f33cbf3ee57d7 78 Pfam PF08972 Domain of unknown function (DUF1902) 5 70 5.0E-24 T 01-11-2018 IPR015066 Domain of unknown function DUF1902 CDA09_18480 3a263687636e3ab6d09f33cbf3ee57d7 78 SUPERFAMILY SSF143100 6 64 1.57E-13 T 01-11-2018 IPR035069 TTHA1013/TTHA0281-like CDA09_18480 3a263687636e3ab6d09f33cbf3ee57d7 78 Gene3D G3DSA:3.30.2390.10 3 73 3.7E-25 T 01-11-2018 CDA09_20190 5b5e37dd4a82489fac865525204ee1e3 178 Pfam PF05069 Phage virion morphogenesis family 16 66 2.0E-6 T 01-11-2018 IPR006522 Phage virion morphogensis protein CDA09_20575 9fc6264ab4fdcf385e19e1f6fadaebf8 557 Pfam PF02646 RmuC family 233 529 6.8E-107 T 01-11-2018 IPR003798 DNA recombination RmuC CDA09_19125 a51d5bd47829059a07a3d1f3105fbdd1 77 Pfam PF01402 Ribbon-helix-helix protein, copG family 9 43 2.2E-4 T 01-11-2018 IPR002145 Ribbon-helix-helix protein, CopG GO:0006355 CDA09_19125 a51d5bd47829059a07a3d1f3105fbdd1 77 SUPERFAMILY SSF47598 4 45 3.3E-8 T 01-11-2018 IPR010985 Ribbon-helix-helix GO:0006355 CDA09_19125 a51d5bd47829059a07a3d1f3105fbdd1 77 Gene3D G3DSA:1.10.1220.10 2 47 8.3E-7 T 01-11-2018 IPR013321 Arc-type ribbon-helix-helix GO:0006355 CDA09_11865 beb8989d1ffc66ac2e1b871af98f8b0b 544 SMART SM00304 213 267 2.8E-10 T 01-11-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 CDA09_11865 beb8989d1ffc66ac2e1b871af98f8b0b 544 SMART SM00283 282 543 2.5E-50 T 01-11-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 CDA09_11865 beb8989d1ffc66ac2e1b871af98f8b0b 544 Gene3D G3DSA:1.10.287.950 213 544 2.2E-63 T 01-11-2018 CDA09_11865 beb8989d1ffc66ac2e1b871af98f8b0b 544 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 188 208 1.4E-6 T 01-11-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 CDA09_11865 beb8989d1ffc66ac2e1b871af98f8b0b 544 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 409 438 1.4E-6 T 01-11-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 CDA09_11865 beb8989d1ffc66ac2e1b871af98f8b0b 544 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 354 510 4.1E-36 T 01-11-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 CDA09_11865 beb8989d1ffc66ac2e1b871af98f8b0b 544 Pfam PF00672 HAMP domain 215 262 3.1E-6 T 01-11-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 CDA09_11865 beb8989d1ffc66ac2e1b871af98f8b0b 544 SUPERFAMILY SSF58104 235 543 4.97E-62 T 01-11-2018 CDA09_21930 543548f3c3a9d00ba9d223caa51ab24c 307 Pfam PF13228 Domain of unknown function (DUF4037) 125 225 1.3E-35 T 01-11-2018 IPR025117 Domain of unknown function DUF4037 CDA09_11165 51874f9f3649380c822b8697af0bbc84 252 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 75 86 5.0E-46 T 01-11-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CDA09_11165 51874f9f3649380c822b8697af0bbc84 252 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 7 24 5.0E-46 T 01-11-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CDA09_11165 51874f9f3649380c822b8697af0bbc84 252 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 122 138 5.0E-46 T 01-11-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CDA09_11165 51874f9f3649380c822b8697af0bbc84 252 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 148 167 5.0E-46 T 01-11-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CDA09_11165 51874f9f3649380c822b8697af0bbc84 252 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 208 228 5.0E-46 T 01-11-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CDA09_11165 51874f9f3649380c822b8697af0bbc84 252 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 169 186 5.0E-46 T 01-11-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CDA09_11165 51874f9f3649380c822b8697af0bbc84 252 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 135 163 - T 01-11-2018 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 CDA09_11165 51874f9f3649380c822b8697af0bbc84 252 Gene3D G3DSA:3.40.50.720 1 248 2.3E-83 T 01-11-2018 CDA09_11165 51874f9f3649380c822b8697af0bbc84 252 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 15 244 1.6E-61 T 01-11-2018 CDA09_11165 51874f9f3649380c822b8697af0bbc84 252 SUPERFAMILY SSF51735 4 246 8.21E-81 T 01-11-2018 IPR036291 NAD(P)-binding domain superfamily CDA09_11165 51874f9f3649380c822b8697af0bbc84 252 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 128 136 4.0E-13 T 01-11-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CDA09_11165 51874f9f3649380c822b8697af0bbc84 252 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 148 167 4.0E-13 T 01-11-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CDA09_11165 51874f9f3649380c822b8697af0bbc84 252 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 75 86 4.0E-13 T 01-11-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CDA09_03020 973d6fabb2f15537224a07bc3588011b 365 SUPERFAMILY SSF144083 298 360 2.75E-17 T 01-11-2018 CDA09_03020 973d6fabb2f15537224a07bc3588011b 365 Gene3D G3DSA:1.20.58.340 173 284 4.1E-36 T 01-11-2018 CDA09_03020 973d6fabb2f15537224a07bc3588011b 365 Gene3D G3DSA:1.20.58.340 286 363 2.8E-25 T 01-11-2018 CDA09_03020 973d6fabb2f15537224a07bc3588011b 365 Gene3D G3DSA:3.30.460.20 9 172 8.9E-46 T 01-11-2018 CDA09_03020 973d6fabb2f15537224a07bc3588011b 365 TIGRFAM TIGR00383 corA: magnesium and cobalt transport protein CorA 41 363 1.5E-87 T 01-11-2018 IPR004488 Magnesium/cobalt transport protein CorA GO:0006824|GO:0015087|GO:0015095|GO:0015693|GO:0016020 CDA09_03020 973d6fabb2f15537224a07bc3588011b 365 SUPERFAMILY SSF143865 20 297 5.23E-81 T 01-11-2018 CDA09_03020 973d6fabb2f15537224a07bc3588011b 365 Pfam PF01544 CorA-like Mg2+ transporter protein 72 359 2.2E-66 T 01-11-2018 IPR002523 Mg2+ transporter protein, CorA-like/Zinc transport protein ZntB GO:0016020|GO:0030001|GO:0046873|GO:0055085 CDA09_13460 e2c26bbdfc6314a332380be773f5ea76 240 SUPERFAMILY SSF52540 50 163 5.1E-33 T 01-11-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CDA09_13460 e2c26bbdfc6314a332380be773f5ea76 240 PIRSF PIRSF037290 5 222 4.8E-71 T 01-11-2018 IPR017166 Uncharacterised conserved protein UCP037290 CDA09_13460 e2c26bbdfc6314a332380be773f5ea76 240 Pfam PF03846 Cell division inhibitor SulA 65 136 8.4E-9 T 01-11-2018 IPR004596 Cell division suppressor protein, SulA GO:0009432|GO:0051782 CDA09_13460 e2c26bbdfc6314a332380be773f5ea76 240 Gene3D G3DSA:3.40.50.300 49 162 1.7E-38 T 01-11-2018 CDA09_10035 23ce6012f75d983ca32ff14c74b81b61 418 Gene3D G3DSA:3.30.1540.10 236 327 2.5E-122 T 01-11-2018 CDA09_10035 23ce6012f75d983ca32ff14c74b81b61 418 Gene3D G3DSA:3.40.50.10540 10 393 2.5E-122 T 01-11-2018 IPR023606 CoA-transferase family III domain superfamily CDA09_10035 23ce6012f75d983ca32ff14c74b81b61 418 Pfam PF02515 CoA-transferase family III 11 376 8.7E-118 T 01-11-2018 IPR003673 CoA-transferase family III GO:0003824 CDA09_10035 23ce6012f75d983ca32ff14c74b81b61 418 SUPERFAMILY SSF89796 8 399 4.06E-122 T 01-11-2018 IPR023606 CoA-transferase family III domain superfamily CDA09_18650 89416894e363a8bc5c9c8e34b17a8868 281 SUPERFAMILY SSF53335 19 260 1.1E-40 T 01-11-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase CDA09_18650 89416894e363a8bc5c9c8e34b17a8868 281 Pfam PF08241 Methyltransferase domain 54 153 2.7E-17 T 01-11-2018 IPR013216 Methyltransferase type 11 GO:0008168 CDA09_18650 89416894e363a8bc5c9c8e34b17a8868 281 Gene3D G3DSA:3.40.50.150 35 280 1.0E-41 T 01-11-2018 CDA09_05410 6a80def4fd3edd5797e2e4e39b04e93a 151 Pfam PF00293 NUDIX domain 6 118 3.9E-10 T 01-11-2018 IPR000086 NUDIX hydrolase domain GO:0016787 CDA09_05410 6a80def4fd3edd5797e2e4e39b04e93a 151 Gene3D G3DSA:3.90.79.10 2 151 1.6E-35 T 01-11-2018 CDA09_05410 6a80def4fd3edd5797e2e4e39b04e93a 151 SUPERFAMILY SSF55811 7 145 5.69E-24 T 01-11-2018 IPR015797 NUDIX hydrolase-like domain superfamily GO:0016787 CDA09_12160 acd65b0bca8a4f1dd05dacceb22c7c96 379 Gene3D G3DSA:3.40.50.11890 29 155 5.5E-66 T 01-11-2018 CDA09_12160 acd65b0bca8a4f1dd05dacceb22c7c96 379 TIGRFAM TIGR03190 benz_CoA_bzdN: benzoyl-CoA reductase, bzd-type, N subunit 3 379 1.1E-265 T 01-11-2018 IPR017603 Benzoyl-CoA reductase, bzd-type, N subunit CDA09_12160 acd65b0bca8a4f1dd05dacceb22c7c96 379 Gene3D G3DSA:3.40.50.11900 232 378 1.8E-48 T 01-11-2018 CDA09_12160 acd65b0bca8a4f1dd05dacceb22c7c96 379 Gene3D G3DSA:1.20.1270.370 9 220 5.5E-66 T 01-11-2018 CDA09_12160 acd65b0bca8a4f1dd05dacceb22c7c96 379 Pfam PF06050 2-hydroxyglutaryl-CoA dehydratase, D-component 36 373 7.6E-56 T 01-11-2018 IPR010327 FldB/FldC dehydratase alpha/beta subunit CDA09_18985 7a5ed385a0926191ee06dd7e216d4153 504 Gene3D G3DSA:2.40.160.180 110 504 2.0E-29 T 01-11-2018 IPR038673 Carbohydrate-selective porin OprB superfamily CDA09_18985 7a5ed385a0926191ee06dd7e216d4153 504 Pfam PF04966 Carbohydrate-selective porin, OprB family 236 502 2.1E-23 T 01-11-2018 IPR007049 Carbohydrate-selective porin OprB GO:0008643|GO:0015288|GO:0016021 CDA09_12195 176ea3105892a923b58942784487f859 311 SUPERFAMILY SSF109604 18 287 1.1E-49 T 01-11-2018 CDA09_12195 176ea3105892a923b58942784487f859 311 Pfam PF08668 HDOD domain 27 222 1.4E-39 T 01-11-2018 IPR013976 Metal-dependent hydrolase HDOD CDA09_12195 176ea3105892a923b58942784487f859 311 Gene3D G3DSA:1.10.3210.10 23 283 1.8E-56 T 01-11-2018 CDA09_09375 92c560bb0549aea9bb0f2212a48a1cdb 528 SUPERFAMILY SSF56801 8 526 9.81E-151 T 01-11-2018 CDA09_09375 92c560bb0549aea9bb0f2212a48a1cdb 528 Gene3D G3DSA:3.30.300.30 427 527 5.4E-31 T 01-11-2018 CDA09_09375 92c560bb0549aea9bb0f2212a48a1cdb 528 Pfam PF13193 AMP-binding enzyme C-terminal domain 440 515 1.8E-19 T 01-11-2018 IPR025110 AMP-binding enzyme, C-terminal domain CDA09_09375 92c560bb0549aea9bb0f2212a48a1cdb 528 Gene3D G3DSA:3.40.50.12780 4 426 1.2E-114 T 01-11-2018 CDA09_09375 92c560bb0549aea9bb0f2212a48a1cdb 528 Pfam PF00501 AMP-binding enzyme 15 431 3.9E-100 T 01-11-2018 IPR000873 AMP-dependent synthetase/ligase GO:0003824 CDA09_09375 92c560bb0549aea9bb0f2212a48a1cdb 528 ProSitePatterns PS00455 Putative AMP-binding domain signature. 182 193 - T 01-11-2018 IPR020845 AMP-binding, conserved site CDA09_18010 9d9d09c795748e442d4c7d5eb9189985 317 Gene3D G3DSA:3.30.1780.10 18 303 1.3E-93 T 01-11-2018 IPR023401 Ornithine cyclodeaminase, N-terminal Reactome: R-HSA-71064 CDA09_18010 9d9d09c795748e442d4c7d5eb9189985 317 Gene3D G3DSA:3.40.50.720 116 290 1.3E-93 T 01-11-2018 CDA09_18010 9d9d09c795748e442d4c7d5eb9189985 317 SUPERFAMILY SSF51735 2 316 1.79E-84 T 01-11-2018 IPR036291 NAD(P)-binding domain superfamily CDA09_18010 9d9d09c795748e442d4c7d5eb9189985 317 PIRSF PIRSF001439 1 317 3.7E-75 T 01-11-2018 IPR003462 Ornithine cyclodeaminase/mu-crystallin Reactome: R-HSA-71064 CDA09_18010 9d9d09c795748e442d4c7d5eb9189985 317 Pfam PF02423 Ornithine cyclodeaminase/mu-crystallin family 73 307 6.3E-65 T 01-11-2018 IPR003462 Ornithine cyclodeaminase/mu-crystallin Reactome: R-HSA-71064 CDA09_12010 6899149f517de61ffc04ca78f2b0d1a1 819 Gene3D G3DSA:1.10.760.10 635 758 2.4E-25 T 01-11-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 CDA09_12010 6899149f517de61ffc04ca78f2b0d1a1 819 SUPERFAMILY SSF46626 76 303 2.04E-10 T 01-11-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 CDA09_12010 6899149f517de61ffc04ca78f2b0d1a1 819 Pfam PF03150 Di-haem cytochrome c peroxidase 78 429 1.1E-20 T 01-11-2018 IPR004852 Di-haem cytochrome c peroxidase GO:0016491|GO:0055114 CDA09_12010 6899149f517de61ffc04ca78f2b0d1a1 819 Gene3D G3DSA:1.10.760.10 433 505 1.9E-5 T 01-11-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 CDA09_12010 6899149f517de61ffc04ca78f2b0d1a1 819 SUPERFAMILY SSF46626 408 745 1.63E-21 T 01-11-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 CDA09_05515 aa2cb310869c640ea8f8b69d1106b9d5 446 SUPERFAMILY SSF54862 34 96 4.19E-6 T 01-11-2018 CDA09_05515 aa2cb310869c640ea8f8b69d1106b9d5 446 Pfam PF02754 Cysteine-rich domain 204 289 2.3E-5 T 01-11-2018 IPR004017 Cysteine-rich domain CDA09_05515 aa2cb310869c640ea8f8b69d1106b9d5 446 Pfam PF02754 Cysteine-rich domain 336 412 8.4E-6 T 01-11-2018 IPR004017 Cysteine-rich domain CDA09_06510 ad46598799ed3faacc3481b88196230e 184 Gene3D G3DSA:1.10.150.130 22 110 6.4E-29 T 01-11-2018 IPR010998 Integrase/recombinase, N-terminal CDA09_06510 ad46598799ed3faacc3481b88196230e 184 Pfam PF00589 Phage integrase family 125 182 2.8E-8 T 01-11-2018 IPR002104 Integrase, catalytic domain GO:0003677|GO:0006310|GO:0015074 CDA09_06510 ad46598799ed3faacc3481b88196230e 184 Gene3D G3DSA:1.10.443.10 114 184 9.1E-15 T 01-11-2018 IPR013762 Integrase-like, catalytic domain superfamily GO:0003677|GO:0006310|GO:0015074 CDA09_06510 ad46598799ed3faacc3481b88196230e 184 Pfam PF13495 Phage integrase, N-terminal SAM-like domain 24 103 9.0E-22 T 01-11-2018 IPR004107 Integrase, SAM-like, N-terminal GO:0003677|GO:0015074 CDA09_06510 ad46598799ed3faacc3481b88196230e 184 SUPERFAMILY SSF56349 24 182 2.15E-21 T 01-11-2018 IPR011010 DNA breaking-rejoining enzyme, catalytic core GO:0003677 CDA09_04535 bf784527ee3f19b7a84181fa5942010d 419 Gene3D G3DSA:3.40.190.10 51 403 5.7E-125 T 01-11-2018 CDA09_04535 bf784527ee3f19b7a84181fa5942010d 419 Pfam PF13379 NMT1-like family 44 293 1.7E-104 T 01-11-2018 CDA09_04535 bf784527ee3f19b7a84181fa5942010d 419 Gene3D G3DSA:3.40.190.10 137 408 5.7E-125 T 01-11-2018 CDA09_04535 bf784527ee3f19b7a84181fa5942010d 419 SUPERFAMILY SSF53850 47 281 1.09E-31 T 01-11-2018 CDA09_09970 37e0e82120758ee56aae58ca6a134cf0 443 SUPERFAMILY SSF103473 6 423 3.01E-60 T 01-11-2018 IPR036259 MFS transporter superfamily CDA09_09970 37e0e82120758ee56aae58ca6a134cf0 443 Gene3D G3DSA:1.20.1250.20 213 425 1.6E-19 T 01-11-2018 CDA09_09970 37e0e82120758ee56aae58ca6a134cf0 443 Gene3D G3DSA:1.20.1250.20 10 198 1.2E-34 T 01-11-2018 CDA09_09970 37e0e82120758ee56aae58ca6a134cf0 443 Pfam PF07690 Major Facilitator Superfamily 21 346 6.3E-37 T 01-11-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 CDA09_22125 83c07666f8d87dd80635c282f504fd6c 184 Pfam PF12101 Protein of unknown function (DUF3577) 4 132 5.9E-59 T 01-11-2018 IPR021960 Protein of unknown function DUF3577 CDA09_07915 6adfef72c0c165372f3dc6e3c75d7e76 851 SUPERFAMILY SSF49503 430 780 2.13E-16 T 01-11-2018 IPR008972 Cupredoxin CDA09_07915 6adfef72c0c165372f3dc6e3c75d7e76 851 Gene3D G3DSA:2.60.40.420 411 612 4.6E-36 T 01-11-2018 IPR008972 Cupredoxin CDA09_07915 6adfef72c0c165372f3dc6e3c75d7e76 851 Pfam PF07731 Multicopper oxidase 683 779 1.3E-9 T 01-11-2018 IPR011706 Multicopper oxidase, type 2 GO:0005507|GO:0016491|GO:0055114 CDA09_07915 6adfef72c0c165372f3dc6e3c75d7e76 851 Gene3D G3DSA:2.60.40.420 661 797 2.7E-21 T 01-11-2018 IPR008972 Cupredoxin CDA09_07915 6adfef72c0c165372f3dc6e3c75d7e76 851 SUPERFAMILY SSF49503 642 781 1.56E-7 T 01-11-2018 IPR008972 Cupredoxin CDA09_21250 86bd9dab4fb87aa7b74f9d0b635753e6 204 Gene3D G3DSA:3.40.50.1000 3 191 1.3E-74 T 01-11-2018 IPR023214 HAD superfamily CDA09_21250 86bd9dab4fb87aa7b74f9d0b635753e6 204 Pfam PF12710 haloacid dehalogenase-like hydrolase 5 160 1.2E-9 T 01-11-2018 CDA09_21250 86bd9dab4fb87aa7b74f9d0b635753e6 204 TIGRFAM TIGR02137 HSK-PSP: phosphoserine phosphatase/homoserine phosphotransferase bifunctional protein 2 201 1.8E-89 T 01-11-2018 IPR011863 Phosphoserine phosphatase/homoserine phosphotransferase bifunctional protein KEGG: 00260+3.1.3.3|KEGG: 00680+3.1.3.3 CDA09_21250 86bd9dab4fb87aa7b74f9d0b635753e6 204 Gene3D G3DSA:3.90.1470.10 13 128 1.3E-74 T 01-11-2018 CDA09_21250 86bd9dab4fb87aa7b74f9d0b635753e6 204 SUPERFAMILY SSF56784 2 189 1.65E-39 T 01-11-2018 IPR036412 HAD-like superfamily CDA09_11795 6abbecf7d12dda9657e8bd72caa09163 256 ProSitePatterns PS00166 Enoyl-CoA hydratase/isomerase signature. 97 117 - T 01-11-2018 IPR018376 Enoyl-CoA hydratase/isomerase, conserved site GO:0003824 CDA09_11795 6abbecf7d12dda9657e8bd72caa09163 256 Pfam PF00378 Enoyl-CoA hydratase/isomerase 12 255 1.6E-75 T 01-11-2018 IPR001753 Enoyl-CoA hydratase/isomerase GO:0003824 CDA09_11795 6abbecf7d12dda9657e8bd72caa09163 256 Gene3D G3DSA:1.10.12.10 199 255 8.7E-20 T 01-11-2018 IPR014748 Enoyl-CoA hydratase, C-terminal CDA09_11795 6abbecf7d12dda9657e8bd72caa09163 256 Gene3D G3DSA:3.90.226.10 1 198 4.4E-71 T 01-11-2018 CDA09_11795 6abbecf7d12dda9657e8bd72caa09163 256 SUPERFAMILY SSF52096 1 254 8.36E-88 T 01-11-2018 IPR029045 ClpP/crotonase-like domain superfamily CDA09_03240 f70e38b43ea9376566f147376e18feb8 403 Gene3D G3DSA:2.120.10.30 138 261 4.5E-16 T 01-11-2018 IPR011042 Six-bladed beta-propeller, TolB-like CDA09_03240 f70e38b43ea9376566f147376e18feb8 403 SUPERFAMILY SSF101898 140 400 8.11E-40 T 01-11-2018 CDA09_03240 f70e38b43ea9376566f147376e18feb8 403 Gene3D G3DSA:2.120.10.30 262 357 1.1E-24 T 01-11-2018 IPR011042 Six-bladed beta-propeller, TolB-like CDA09_03240 f70e38b43ea9376566f147376e18feb8 403 Gene3D G3DSA:2.120.10.30 358 401 5.9E-10 T 01-11-2018 IPR011042 Six-bladed beta-propeller, TolB-like CDA09_03240 f70e38b43ea9376566f147376e18feb8 403 Pfam PF01436 NHL repeat 369 395 2.4E-4 T 01-11-2018 IPR001258 NHL repeat GO:0005515 CDA09_03240 f70e38b43ea9376566f147376e18feb8 403 Pfam PF01436 NHL repeat 229 255 5.1E-6 T 01-11-2018 IPR001258 NHL repeat GO:0005515 CDA09_05940 dd41808ea5df92501907e5bad2e324cb 202 Pfam PF01618 MotA/TolQ/ExbB proton channel family 67 186 1.8E-31 T 01-11-2018 IPR002898 MotA/TolQ/ExbB proton channel CDA09_15230 29f8e81741c43725be7dd160a04ae236 598 Pfam PF06421 GTP-binding protein LepA C-terminus 488 593 4.8E-50 T 01-11-2018 IPR013842 GTP-binding protein LepA, C-terminal CDA09_15230 29f8e81741c43725be7dd160a04ae236 598 TIGRFAM TIGR01393 lepA: elongation factor 4 3 595 3.3E-303 T 01-11-2018 IPR006297 Elongation factor 4 GO:0005525 CDA09_15230 29f8e81741c43725be7dd160a04ae236 598 SUPERFAMILY SSF54980 292 370 3.09E-18 T 01-11-2018 IPR035647 EF-G domain III/V-like CDA09_15230 29f8e81741c43725be7dd160a04ae236 598 PRINTS PR00315 GTP-binding elongation factor signature 90 101 2.3E-14 T 01-11-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 CDA09_15230 29f8e81741c43725be7dd160a04ae236 598 PRINTS PR00315 GTP-binding elongation factor signature 126 135 2.3E-14 T 01-11-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 CDA09_15230 29f8e81741c43725be7dd160a04ae236 598 PRINTS PR00315 GTP-binding elongation factor signature 6 19 2.3E-14 T 01-11-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 CDA09_15230 29f8e81741c43725be7dd160a04ae236 598 PRINTS PR00315 GTP-binding elongation factor signature 74 84 2.3E-14 T 01-11-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 CDA09_15230 29f8e81741c43725be7dd160a04ae236 598 PRINTS PR00315 GTP-binding elongation factor signature 49 57 2.3E-14 T 01-11-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 CDA09_15230 29f8e81741c43725be7dd160a04ae236 598 Gene3D G3DSA:3.40.50.300 1 185 2.0E-73 T 01-11-2018 CDA09_15230 29f8e81741c43725be7dd160a04ae236 598 Gene3D G3DSA:2.40.30.10 186 285 1.2E-33 T 01-11-2018 CDA09_15230 29f8e81741c43725be7dd160a04ae236 598 Pfam PF03144 Elongation factor Tu domain 2 205 275 2.9E-8 T 01-11-2018 IPR004161 Translation elongation factor EFTu-like, domain 2 GO:0005525 CDA09_15230 29f8e81741c43725be7dd160a04ae236 598 Hamap MF_00071 Elongation factor 4 [lepA]. 1 597 308.876 T 01-11-2018 IPR006297 Elongation factor 4 GO:0005525 CDA09_15230 29f8e81741c43725be7dd160a04ae236 598 SUPERFAMILY SSF50447 165 288 5.52E-29 T 01-11-2018 IPR009000 Translation protein, beta-barrel domain superfamily CDA09_15230 29f8e81741c43725be7dd160a04ae236 598 Gene3D G3DSA:3.30.70.2570 479 553 2.0E-32 T 01-11-2018 IPR038363 LepA, C-terminal domain superfamily CDA09_15230 29f8e81741c43725be7dd160a04ae236 598 Gene3D G3DSA:3.30.70.3380 368 478 1.1E-41 T 01-11-2018 CDA09_15230 29f8e81741c43725be7dd160a04ae236 598 Pfam PF00009 Elongation factor Tu GTP binding domain 3 181 1.3E-53 T 01-11-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 CDA09_15230 29f8e81741c43725be7dd160a04ae236 598 SUPERFAMILY SSF54980 399 493 8.15E-25 T 01-11-2018 IPR035647 EF-G domain III/V-like CDA09_15230 29f8e81741c43725be7dd160a04ae236 598 ProSitePatterns PS00301 Translational (tr)-type guanine nucleotide-binding (G) domain signature. 42 57 - T 01-11-2018 IPR031157 Tr-type G domain, conserved site CDA09_15230 29f8e81741c43725be7dd160a04ae236 598 SUPERFAMILY SSF52540 2 205 7.71E-56 T 01-11-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CDA09_15230 29f8e81741c43725be7dd160a04ae236 598 Gene3D G3DSA:3.30.70.870 286 367 3.1E-36 T 01-11-2018 CDA09_15230 29f8e81741c43725be7dd160a04ae236 598 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 6 176 2.1E-18 T 01-11-2018 IPR005225 Small GTP-binding protein domain GO:0005525 CDA09_15230 29f8e81741c43725be7dd160a04ae236 598 Pfam PF00679 Elongation factor G C-terminus 399 484 1.5E-20 T 01-11-2018 IPR000640 Elongation factor EFG, domain V-like CDA09_12590 a2714129bdd3dd6e2cc55329c9604794 225 SUPERFAMILY SSF56925 24 225 2.88E-32 T 01-11-2018 IPR011250 Outer membrane protein/outer membrane enzyme PagP, beta-barrel CDA09_12590 a2714129bdd3dd6e2cc55329c9604794 225 Gene3D G3DSA:2.40.160.20 23 225 9.5E-70 T 01-11-2018 CDA09_12590 a2714129bdd3dd6e2cc55329c9604794 225 ProSitePatterns PS00695 Enterobacterial virulence outer membrane protein signature 2. 217 225 - T 01-11-2018 IPR000758 Virulence-related outer membrane protein GO:0009279 CDA09_12590 a2714129bdd3dd6e2cc55329c9604794 225 Pfam PF03922 OmpW family 24 225 3.1E-63 T 01-11-2018 IPR005618 Outer membrane protein, OmpW GO:0019867 CDA09_17785 a7a3c1fce6b2eb9d5a882cc6edf7866e 221 SUPERFAMILY SSF52833 63 199 1.02E-8 T 01-11-2018 IPR036249 Thioredoxin-like superfamily CDA09_10610 3df24e8ca41ddbacb3529c43298426f9 223 TIGRFAM TIGR04283 glyco_like_mftF: transferase 2, rSAM/selenodomain-associated 4 222 7.3E-83 T 01-11-2018 IPR026461 Transferase 2, rSAM/selenodomain-associated CDA09_10610 3df24e8ca41ddbacb3529c43298426f9 223 SUPERFAMILY SSF53448 4 209 5.34E-31 T 01-11-2018 IPR029044 Nucleotide-diphospho-sugar transferases CDA09_10610 3df24e8ca41ddbacb3529c43298426f9 223 Gene3D G3DSA:3.90.550.10 4 210 9.8E-22 T 01-11-2018 IPR029044 Nucleotide-diphospho-sugar transferases CDA09_10610 3df24e8ca41ddbacb3529c43298426f9 223 Pfam PF00535 Glycosyl transferase family 2 4 119 5.8E-14 T 01-11-2018 IPR001173 Glycosyltransferase 2-like Reactome: R-HSA-913709 CDA09_18755 490fc3f9065a80233e0568f073434a18 118 Hamap MF_00634 UPF0235 protein YggU [yggU]. 11 99 20.735 T 01-11-2018 IPR003746 Protein of unknown function DUF167 CDA09_18755 490fc3f9065a80233e0568f073434a18 118 SUPERFAMILY SSF69786 6 90 2.75E-29 T 01-11-2018 IPR036591 YggU-like superfamily CDA09_18755 490fc3f9065a80233e0568f073434a18 118 Pfam PF02594 Uncharacterised ACR, YggU family COG1872 15 85 1.3E-27 T 01-11-2018 IPR003746 Protein of unknown function DUF167 CDA09_18755 490fc3f9065a80233e0568f073434a18 118 TIGRFAM TIGR00251 TIGR00251: TIGR00251 family protein 8 87 1.5E-17 T 01-11-2018 IPR005228 Conserved hypothetical protein CHP00251 CDA09_18755 490fc3f9065a80233e0568f073434a18 118 Gene3D G3DSA:3.30.1200.10 3 101 7.4E-32 T 01-11-2018 IPR036591 YggU-like superfamily CDA09_18755 490fc3f9065a80233e0568f073434a18 118 SMART SM01152 11 87 2.3E-41 T 01-11-2018 IPR003746 Protein of unknown function DUF167 CDA09_15290 f54829a4cbd439e6f069c2cfdf929e85 309 Gene3D G3DSA:3.40.366.10 4 282 5.7E-94 T 01-11-2018 IPR001227 Acyl transferase domain superfamily GO:0016740 CDA09_15290 f54829a4cbd439e6f069c2cfdf929e85 309 TIGRFAM TIGR00128 fabD: malonyl CoA-acyl carrier protein transacylase 1 288 9.0E-102 T 01-11-2018 IPR004410 Malonyl CoA-acyl carrier protein transacylase, FabD-type GO:0004314 KEGG: 00061+2.3.1.39|MetaCyc: PWY-4381|MetaCyc: PWY-6799|MetaCyc: PWY-7388 CDA09_15290 f54829a4cbd439e6f069c2cfdf929e85 309 SUPERFAMILY SSF52151 3 306 2.01E-72 T 01-11-2018 IPR016035 Acyl transferase/acyl hydrolase/lysophospholipase CDA09_15290 f54829a4cbd439e6f069c2cfdf929e85 309 SMART SM00827 Acyl transferase domain in polyketide synthase (PKS) enzymes. 6 305 7.1E-29 T 01-11-2018 IPR020801 Polyketide synthase, acyl transferase domain CDA09_15290 f54829a4cbd439e6f069c2cfdf929e85 309 SUPERFAMILY SSF55048 126 195 2.49E-18 T 01-11-2018 IPR016036 Malonyl-CoA ACP transacylase, ACP-binding CDA09_15290 f54829a4cbd439e6f069c2cfdf929e85 309 Pfam PF00698 Acyl transferase domain 6 274 2.7E-33 T 01-11-2018 IPR014043 Acyl transferase CDA09_15290 f54829a4cbd439e6f069c2cfdf929e85 309 PIRSF PIRSF000446 1 309 9.3E-107 T 01-11-2018 IPR024925 Malonyl CoA-acyl carrier protein transacylase KEGG: 00061+2.3.1.39|MetaCyc: PWY-4381|MetaCyc: PWY-6799|MetaCyc: PWY-7388 CDA09_15290 f54829a4cbd439e6f069c2cfdf929e85 309 Gene3D G3DSA:3.30.70.250 123 195 5.7E-94 T 01-11-2018 CDA09_05860 1407e667380bd663b6693c26165661a2 287 SUPERFAMILY SSF161098 86 272 2.22E-27 T 01-11-2018 IPR035906 MetI-like superfamily CDA09_05860 1407e667380bd663b6693c26165661a2 287 Gene3D G3DSA:1.10.3720.10 84 279 3.3E-19 T 01-11-2018 IPR035906 MetI-like superfamily CDA09_05860 1407e667380bd663b6693c26165661a2 287 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 110 279 2.3E-18 T 01-11-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 CDA09_10405 f59ec38d2f2928c7da73b4ee51032a1b 88 PIRSF PIRSF000039 1 88 6.1E-23 T 01-11-2018 IPR010353 Phenol hydroxylase subunit KEGG: 00623+1.14.13.7|KEGG: 00627+1.14.13.7|MetaCyc: PWY-5418|MetaCyc: PWY-6197 CDA09_10405 f59ec38d2f2928c7da73b4ee51032a1b 88 ProDom PD468738 PHENOL HYDROXYLASE COMPONENT SUBUNIT PHENOLHYDROXYLASE MONOOXYGENASE TOMA0 P0 HYDROCARBONS IRON 2 54 1.0E-17 T 01-11-2018 IPR010353 Phenol hydroxylase subunit KEGG: 00623+1.14.13.7|KEGG: 00627+1.14.13.7|MetaCyc: PWY-5418|MetaCyc: PWY-6197 CDA09_10405 f59ec38d2f2928c7da73b4ee51032a1b 88 Pfam PF06099 Phenol hydroxylase subunit 10 62 9.1E-27 T 01-11-2018 IPR010353 Phenol hydroxylase subunit KEGG: 00623+1.14.13.7|KEGG: 00627+1.14.13.7|MetaCyc: PWY-5418|MetaCyc: PWY-6197 CDA09_12950 46902e8e5004f50f17fb3da711b7dd3c 157 SUPERFAMILY SSF103039 14 121 1.57E-11 T 01-11-2018 IPR028976 CheC-like superfamily CDA09_12950 46902e8e5004f50f17fb3da711b7dd3c 157 Pfam PF13690 Chemotaxis phosphatase CheX 51 118 1.7E-12 T 01-11-2018 IPR028051 Chemotaxis phosphatase CheX-like domain CDA09_12950 46902e8e5004f50f17fb3da711b7dd3c 157 Gene3D G3DSA:3.40.1550.10 8 152 1.2E-12 T 01-11-2018 IPR028976 CheC-like superfamily CDA09_16565 dec9fd7c21ee3a3dfe4ab316997cba00 443 Hamap MF_01865 Ribosomal protein S12 methylthiotransferase RimO [rimO]. 10 441 61.081 T 01-11-2018 IPR005840 Ribosomal protein S12 methylthiotransferase RimO GO:0005737|GO:0016740|GO:0018339|GO:0051539 CDA09_16565 dec9fd7c21ee3a3dfe4ab316997cba00 443 SMART SM00729 141 366 3.6E-58 T 01-11-2018 IPR006638 Elp3/MiaB/NifB GO:0003824|GO:0051536 CDA09_16565 dec9fd7c21ee3a3dfe4ab316997cba00 443 Gene3D G3DSA:2.40.50.140 381 443 5.3E-14 T 01-11-2018 CDA09_16565 dec9fd7c21ee3a3dfe4ab316997cba00 443 TIGRFAM TIGR01125 TIGR01125: ribosomal protein S12 methylthiotransferase RimO 11 438 1.0E-167 T 01-11-2018 IPR005840 Ribosomal protein S12 methylthiotransferase RimO GO:0005737|GO:0016740|GO:0018339|GO:0051539 CDA09_16565 dec9fd7c21ee3a3dfe4ab316997cba00 443 Pfam PF00919 Uncharacterized protein family UPF0004 11 102 1.1E-19 T 01-11-2018 IPR013848 Methylthiotransferase, N-terminal GO:0051539 CDA09_16565 dec9fd7c21ee3a3dfe4ab316997cba00 443 TIGRFAM TIGR00089 TIGR00089: radical SAM methylthiotransferase, MiaB/RimO family 11 439 4.5E-101 T 01-11-2018 IPR005839 Methylthiotransferase GO:0006400|GO:0016740|GO:0051539 CDA09_16565 dec9fd7c21ee3a3dfe4ab316997cba00 443 Pfam PF04055 Radical SAM superfamily 147 324 6.8E-30 T 01-11-2018 IPR007197 Radical SAM GO:0003824|GO:0051536 CDA09_16565 dec9fd7c21ee3a3dfe4ab316997cba00 443 Gene3D G3DSA:3.40.50.12160 11 130 1.8E-26 T 01-11-2018 IPR038135 Methylthiotransferase, N-terminal domain superfamily CDA09_16565 dec9fd7c21ee3a3dfe4ab316997cba00 443 Gene3D G3DSA:3.80.30.20 139 380 2.2E-73 T 01-11-2018 IPR023404 Radical SAM, alpha/beta horseshoe CDA09_16565 dec9fd7c21ee3a3dfe4ab316997cba00 443 ProSitePatterns PS01278 Methylthiotransferase radical SAM domain signature. 145 165 - T 01-11-2018 IPR020612 Methylthiotransferase, conserved site GO:0051539 CDA09_16565 dec9fd7c21ee3a3dfe4ab316997cba00 443 SUPERFAMILY SSF102114 111 377 5.49E-54 T 01-11-2018 CDA09_14520 53a9466e0e9cfb95eb73231aebca8483 294 PIRSF PIRSF005261 1 283 7.3E-74 T 01-11-2018 IPR000397 Heat shock protein Hsp33 GO:0005737|GO:0006457|GO:0051082 CDA09_14520 53a9466e0e9cfb95eb73231aebca8483 294 SUPERFAMILY SSF118352 224 281 1.19E-8 T 01-11-2018 IPR016154 Heat shock protein Hsp33, C-terminal GO:0005737|GO:0006457|GO:0051082 CDA09_14520 53a9466e0e9cfb95eb73231aebca8483 294 Gene3D G3DSA:1.10.287.480 176 225 8.7E-14 T 01-11-2018 IPR023212 Heat shock protein Hsp33, helix hairpin bin domain superfamily CDA09_14520 53a9466e0e9cfb95eb73231aebca8483 294 SUPERFAMILY SSF64397 6 226 6.41E-60 T 01-11-2018 IPR016153 Heat shock protein Hsp33, N-terminal GO:0005737|GO:0006457|GO:0051082 CDA09_14520 53a9466e0e9cfb95eb73231aebca8483 294 Pfam PF01430 Hsp33 protein 7 272 7.7E-68 T 01-11-2018 IPR000397 Heat shock protein Hsp33 GO:0005737|GO:0006457|GO:0051082 CDA09_14520 53a9466e0e9cfb95eb73231aebca8483 294 Gene3D G3DSA:3.90.1280.10 232 283 3.2E-6 T 01-11-2018 IPR016154 Heat shock protein Hsp33, C-terminal GO:0005737|GO:0006457|GO:0051082 CDA09_14520 53a9466e0e9cfb95eb73231aebca8483 294 Gene3D G3DSA:3.55.30.10 1 174 3.9E-53 T 01-11-2018 IPR016153 Heat shock protein Hsp33, N-terminal GO:0005737|GO:0006457|GO:0051082 CDA09_10410 6f67a8d4b42b5c82ecfaf3d494d16aa8 330 Gene3D G3DSA:1.10.620.20 1 330 7.4E-114 T 01-11-2018 IPR012348 Ribonucleotide reductase-like GO:0016491|GO:0055114 Reactome: R-HSA-499943 CDA09_10410 6f67a8d4b42b5c82ecfaf3d494d16aa8 330 PIRSF PIRSF000040 1 330 1.2E-103 T 01-11-2018 IPR012078 Methane/phenol monooxygenase, hydroxylase component GO:0016709|GO:0055114 CDA09_10410 6f67a8d4b42b5c82ecfaf3d494d16aa8 330 Pfam PF02332 Methane/Phenol/Toluene Hydroxylase 51 273 3.7E-70 T 01-11-2018 IPR003430 Methane/phenol/toluene hydroxylase GO:0006725|GO:0055114 CDA09_10410 6f67a8d4b42b5c82ecfaf3d494d16aa8 330 SUPERFAMILY SSF47240 1 328 2.57E-113 T 01-11-2018 IPR009078 Ferritin-like superfamily CDA09_02015 0aa2493e9b6804633bb715d4c2d89afb 298 Pfam PF01136 Peptidase family U32 95 244 1.8E-9 T 01-11-2018 IPR001539 Peptidase U32 GO:0006508|GO:0008233 CDA09_01120 6c75235c4bbc78f80d8b8f4afdb3f03f 114 Gene3D G3DSA:1.10.760.10 27 114 9.3E-27 T 01-11-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 CDA09_01120 6c75235c4bbc78f80d8b8f4afdb3f03f 114 SUPERFAMILY SSF46626 9 114 3.31E-10 T 01-11-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 CDA09_01120 6c75235c4bbc78f80d8b8f4afdb3f03f 114 PRINTS PR00606 Class ID cytochrome C signature 51 64 1.2E-5 T 01-11-2018 IPR002324 Cytochrome c, class ID GO:0005506|GO:0009055|GO:0020037 CDA09_01120 6c75235c4bbc78f80d8b8f4afdb3f03f 114 PRINTS PR00606 Class ID cytochrome C signature 36 49 1.2E-5 T 01-11-2018 IPR002324 Cytochrome c, class ID GO:0005506|GO:0009055|GO:0020037 CDA09_01120 6c75235c4bbc78f80d8b8f4afdb3f03f 114 PRINTS PR00606 Class ID cytochrome C signature 103 113 1.2E-5 T 01-11-2018 IPR002324 Cytochrome c, class ID GO:0005506|GO:0009055|GO:0020037 CDA09_01120 6c75235c4bbc78f80d8b8f4afdb3f03f 114 Pfam PF00034 Cytochrome c 33 114 1.8E-5 T 01-11-2018 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 Reactome: R-HSA-111457|Reactome: R-HSA-111458|Reactome: R-HSA-111459|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 CDA09_19735 adcdcddc5c0c11ccfb4539c3e5a7e696 280 Pfam PF00005 ABC transporter 45 206 2.7E-29 T 01-11-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 CDA09_19735 adcdcddc5c0c11ccfb4539c3e5a7e696 280 SMART SM00382 54 255 4.2E-5 T 01-11-2018 IPR003593 AAA+ ATPase domain CDA09_19735 adcdcddc5c0c11ccfb4539c3e5a7e696 280 Pfam PF12399 Branched-chain amino acid ATP-binding cassette transporter 255 277 9.4E-9 T 01-11-2018 IPR032823 Branched-chain amino acid ATP-binding cassette transporter, C-terminal CDA09_19735 adcdcddc5c0c11ccfb4539c3e5a7e696 280 Gene3D G3DSA:3.40.50.300 25 279 1.2E-59 T 01-11-2018 CDA09_19735 adcdcddc5c0c11ccfb4539c3e5a7e696 280 SUPERFAMILY SSF52540 28 277 6.04E-62 T 01-11-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CDA09_07995 2462a50fb16490d5db6921220f8da87b 280 Gene3D G3DSA:3.40.190.10 146 233 3.3E-13 T 01-11-2018 CDA09_07995 2462a50fb16490d5db6921220f8da87b 280 Pfam PF00497 Bacterial extracellular solute-binding proteins, family 3 151 273 8.1E-11 T 01-11-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF CDA09_07995 2462a50fb16490d5db6921220f8da87b 280 SMART SM00062 36 277 1.9E-5 T 01-11-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF CDA09_07995 2462a50fb16490d5db6921220f8da87b 280 SUPERFAMILY SSF53850 37 274 9.59E-28 T 01-11-2018 CDA09_07995 2462a50fb16490d5db6921220f8da87b 280 Gene3D G3DSA:3.40.190.10 235 272 3.3E-13 T 01-11-2018 CDA09_07995 2462a50fb16490d5db6921220f8da87b 280 Gene3D G3DSA:3.40.190.10 27 95 5.3E-10 T 01-11-2018 CDA09_09305 f8d5945aeb51f54a877ecd1aa3dd476c 1105 Pfam PF00271 Helicase conserved C-terminal domain 391 477 1.2E-4 T 01-11-2018 IPR001650 Helicase, C-terminal CDA09_09305 f8d5945aeb51f54a877ecd1aa3dd476c 1105 Pfam PF04851 Type III restriction enzyme, res subunit 153 319 9.7E-17 T 01-11-2018 IPR006935 Helicase/UvrB, N-terminal GO:0003677|GO:0005524|GO:0016787 CDA09_09305 f8d5945aeb51f54a877ecd1aa3dd476c 1105 SMART SM00490 396 479 0.0095 T 01-11-2018 IPR001650 Helicase, C-terminal CDA09_09305 f8d5945aeb51f54a877ecd1aa3dd476c 1105 SMART SM00487 149 356 1.0E-7 T 01-11-2018 IPR014001 Helicase superfamily 1/2, ATP-binding domain CDA09_09305 f8d5945aeb51f54a877ecd1aa3dd476c 1105 SUPERFAMILY SSF52540 175 488 2.73E-28 T 01-11-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CDA09_09305 f8d5945aeb51f54a877ecd1aa3dd476c 1105 Gene3D G3DSA:3.40.50.300 150 336 2.7E-21 T 01-11-2018 CDA09_09305 f8d5945aeb51f54a877ecd1aa3dd476c 1105 Gene3D G3DSA:3.40.50.300 359 530 1.4E-13 T 01-11-2018 CDA09_11475 b8e663a6f2ed3305eb20725726ee1854 292 Gene3D G3DSA:3.40.190.10 38 267 6.0E-6 T 01-11-2018 CDA09_11475 b8e663a6f2ed3305eb20725726ee1854 292 SMART SM00062 37 279 3.8E-4 T 01-11-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF CDA09_11475 b8e663a6f2ed3305eb20725726ee1854 292 SUPERFAMILY SSF53850 33 278 2.41E-16 T 01-11-2018 CDA09_11475 b8e663a6f2ed3305eb20725726ee1854 292 Gene3D G3DSA:3.40.190.10 125 240 6.0E-6 T 01-11-2018 CDA09_11475 b8e663a6f2ed3305eb20725726ee1854 292 TIGRFAM TIGR03871 ABC_peri_MoxJ_2: quinoprotein dehydrogenase-associated probable ABC transporter substrate-binding protein 37 280 1.3E-76 T 01-11-2018 IPR022448 Quinoprotein dehydrogenase-associated CDA09_19025 40a754964d4f344e8808cd679e5dfb58 155 SUPERFAMILY SSF52821 19 151 7.6E-24 T 01-11-2018 IPR036873 Rhodanese-like domain superfamily CDA09_19025 40a754964d4f344e8808cd679e5dfb58 155 Gene3D G3DSA:3.40.250.10 34 154 8.0E-27 T 01-11-2018 IPR036873 Rhodanese-like domain superfamily CDA09_19025 40a754964d4f344e8808cd679e5dfb58 155 SMART SM00450 37 142 1.4E-10 T 01-11-2018 IPR001763 Rhodanese-like domain CDA09_19025 40a754964d4f344e8808cd679e5dfb58 155 Pfam PF00581 Rhodanese-like domain 38 135 1.5E-11 T 01-11-2018 IPR001763 Rhodanese-like domain CDA09_03095 0b6bacd29932d400ceadcb4c637bf176 254 Pfam PF04752 ChaC-like protein 71 236 4.2E-39 T 01-11-2018 IPR006840 Glutathione-specific gamma-glutamylcyclotransferase GO:0003839|GO:0006751 KEGG: 00480+4.3.2.7|MetaCyc: PWY-7942|Reactome: R-HSA-174403 CDA09_03095 0b6bacd29932d400ceadcb4c637bf176 254 SUPERFAMILY SSF110857 71 181 1.83E-7 T 01-11-2018 IPR036568 Gamma-glutamyl cyclotransferase-like superfamily CDA09_03095 0b6bacd29932d400ceadcb4c637bf176 254 Gene3D G3DSA:3.10.490.10 63 237 3.3E-9 T 01-11-2018 CDA09_11345 a57d35b4ea15e5542fbebed19ef693e6 237 Pfam PF02441 Flavoprotein 62 176 1.3E-11 T 01-11-2018 IPR003382 Flavoprotein GO:0003824 Reactome: R-HSA-196783 CDA09_11345 a57d35b4ea15e5542fbebed19ef693e6 237 Gene3D G3DSA:3.40.50.1950 58 237 1.0E-46 T 01-11-2018 IPR036551 Flavin prenyltransferase-like GO:0003824 Reactome: R-HSA-196783 CDA09_11345 a57d35b4ea15e5542fbebed19ef693e6 237 SUPERFAMILY SSF52507 64 217 4.97E-17 T 01-11-2018 IPR036551 Flavin prenyltransferase-like GO:0003824 Reactome: R-HSA-196783 CDA09_10305 2788d071b8c28d1790b8a2f07b1da4c6 239 SMART SM00345 22 80 4.8E-12 T 01-11-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 CDA09_10305 2788d071b8c28d1790b8a2f07b1da4c6 239 SUPERFAMILY SSF48008 87 226 9.68E-22 T 01-11-2018 IPR008920 Transcription regulator FadR/GntR, C-terminal CDA09_10305 2788d071b8c28d1790b8a2f07b1da4c6 239 Gene3D G3DSA:1.10.10.10 9 81 3.9E-14 T 01-11-2018 IPR036388 Winged helix-like DNA-binding domain superfamily CDA09_10305 2788d071b8c28d1790b8a2f07b1da4c6 239 SUPERFAMILY SSF46785 11 103 4.95E-15 T 01-11-2018 IPR036390 Winged helix DNA-binding domain superfamily CDA09_10305 2788d071b8c28d1790b8a2f07b1da4c6 239 Pfam PF07729 FCD domain 90 219 8.2E-22 T 01-11-2018 IPR011711 GntR, C-terminal CDA09_10305 2788d071b8c28d1790b8a2f07b1da4c6 239 Pfam PF00392 Bacterial regulatory proteins, gntR family 19 80 1.4E-15 T 01-11-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 CDA09_10305 2788d071b8c28d1790b8a2f07b1da4c6 239 SMART SM00895 90 220 7.3E-17 T 01-11-2018 IPR011711 GntR, C-terminal CDA09_10305 2788d071b8c28d1790b8a2f07b1da4c6 239 Gene3D G3DSA:1.20.120.530 84 231 1.7E-29 T 01-11-2018 IPR008920 Transcription regulator FadR/GntR, C-terminal CDA09_16980 f2620495043c52b63764ad3b612b4283 142 Gene3D G3DSA:1.10.12.20 16 49 3.3E-6 T 01-11-2018 CDA09_16980 f2620495043c52b63764ad3b612b4283 142 Pfam PF01796 DUF35 OB-fold domain, acyl-CoA-associated 52 119 1.9E-15 T 01-11-2018 IPR002878 Domain of unknown function DUF35, OB-fold, C-terminal CDA09_16980 f2620495043c52b63764ad3b612b4283 142 Pfam PF12172 Rubredoxin-like zinc ribbon domain (DUF35_N) 18 46 5.8E-9 T 01-11-2018 IPR022002 Domain of unknown function DUF35, rubredoxin-like zinc ribbon domain, N-terminal CDA09_16980 f2620495043c52b63764ad3b612b4283 142 SUPERFAMILY SSF50249 19 124 2.74E-23 T 01-11-2018 IPR012340 Nucleic acid-binding, OB-fold CDA09_03320 8923b4173fff9dc73acb28d31e99904f 182 Pfam PF01252 Signal peptidase (SPase) II 28 167 2.2E-39 T 01-11-2018 IPR001872 Peptidase A8, signal peptidase II GO:0004190|GO:0006508|GO:0016020 MetaCyc: PWY-7884 CDA09_03320 8923b4173fff9dc73acb28d31e99904f 182 Hamap MF_00161 Lipoprotein signal peptidase [lspA]. 19 173 17.014 T 01-11-2018 IPR001872 Peptidase A8, signal peptidase II GO:0004190|GO:0006508|GO:0016020 MetaCyc: PWY-7884 CDA09_03320 8923b4173fff9dc73acb28d31e99904f 182 ProSitePatterns PS00855 Signal peptidases II signature. 115 127 - T 01-11-2018 IPR001872 Peptidase A8, signal peptidase II GO:0004190|GO:0006508|GO:0016020 MetaCyc: PWY-7884 CDA09_03320 8923b4173fff9dc73acb28d31e99904f 182 PRINTS PR00781 Lipoprotein signal peptidase family (A8) signature 65 73 1.4E-17 T 01-11-2018 IPR001872 Peptidase A8, signal peptidase II GO:0004190|GO:0006508|GO:0016020 MetaCyc: PWY-7884 CDA09_03320 8923b4173fff9dc73acb28d31e99904f 182 PRINTS PR00781 Lipoprotein signal peptidase family (A8) signature 148 164 1.4E-17 T 01-11-2018 IPR001872 Peptidase A8, signal peptidase II GO:0004190|GO:0006508|GO:0016020 MetaCyc: PWY-7884 CDA09_03320 8923b4173fff9dc73acb28d31e99904f 182 PRINTS PR00781 Lipoprotein signal peptidase family (A8) signature 112 127 1.4E-17 T 01-11-2018 IPR001872 Peptidase A8, signal peptidase II GO:0004190|GO:0006508|GO:0016020 MetaCyc: PWY-7884 CDA09_03320 8923b4173fff9dc73acb28d31e99904f 182 TIGRFAM TIGR00077 lspA: signal peptidase II 23 169 3.0E-45 T 01-11-2018 IPR001872 Peptidase A8, signal peptidase II GO:0004190|GO:0006508|GO:0016020 MetaCyc: PWY-7884 CDA09_07935 0c70990002f30ad6f4855b66a3d48686 530 SMART SM00382 330 437 0.0091 T 01-11-2018 IPR003593 AAA+ ATPase domain CDA09_07935 0c70990002f30ad6f4855b66a3d48686 530 Gene3D G3DSA:1.10.8.60 454 527 1.8E-8 T 01-11-2018 CDA09_07935 0c70990002f30ad6f4855b66a3d48686 530 Gene3D G3DSA:3.30.450.40 8 189 1.4E-48 T 01-11-2018 IPR029016 GAF-like domain superfamily CDA09_07935 0c70990002f30ad6f4855b66a3d48686 530 SUPERFAMILY SSF52540 314 512 9.76E-25 T 01-11-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CDA09_07935 0c70990002f30ad6f4855b66a3d48686 530 Gene3D G3DSA:3.40.50.300 312 453 2.0E-20 T 01-11-2018 CDA09_07935 0c70990002f30ad6f4855b66a3d48686 530 ProSitePatterns PS00688 Sigma-54 interaction domain C-terminal part signature. 491 500 - T 01-11-2018 IPR025944 Sigma-54 interaction domain, conserved site CDA09_07935 0c70990002f30ad6f4855b66a3d48686 530 Pfam PF01590 GAF domain 77 185 6.1E-8 T 01-11-2018 IPR003018 GAF domain GO:0005515 CDA09_07935 0c70990002f30ad6f4855b66a3d48686 530 Pfam PF00158 Sigma-54 interaction domain 315 373 3.5E-8 T 01-11-2018 IPR002078 RNA polymerase sigma factor 54 interaction domain GO:0005524|GO:0006355|GO:0008134 CDA09_01375 6acaa4d7eea91c71a3d93d25271ac7af 144 Gene3D G3DSA:3.40.30.10 1 139 1.1E-32 T 01-11-2018 CDA09_01375 6acaa4d7eea91c71a3d93d25271ac7af 144 Pfam PF08534 Redoxin 1 127 8.6E-20 T 01-11-2018 IPR013740 Redoxin GO:0016491 Reactome: R-HSA-3299685|Reactome: R-HSA-5628897 CDA09_01375 6acaa4d7eea91c71a3d93d25271ac7af 144 ProSitePatterns PS00194 Thioredoxin family active site. 26 44 - T 01-11-2018 IPR017937 Thioredoxin, conserved site GO:0045454 CDA09_01375 6acaa4d7eea91c71a3d93d25271ac7af 144 SUPERFAMILY SSF52833 2 125 3.41E-30 T 01-11-2018 IPR036249 Thioredoxin-like superfamily CDA09_10590 f9eee50a391c3d31c98149628d90a061 238 Pfam PF00005 ABC transporter 23 166 6.0E-31 T 01-11-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 CDA09_10590 f9eee50a391c3d31c98149628d90a061 238 SMART SM00382 32 217 6.9E-10 T 01-11-2018 IPR003593 AAA+ ATPase domain CDA09_10590 f9eee50a391c3d31c98149628d90a061 238 Gene3D G3DSA:3.40.50.300 4 238 1.2E-56 T 01-11-2018 CDA09_10590 f9eee50a391c3d31c98149628d90a061 238 ProSitePatterns PS00211 ABC transporters family signature. 139 153 - T 01-11-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 CDA09_10590 f9eee50a391c3d31c98149628d90a061 238 SUPERFAMILY SSF52540 5 233 5.54E-58 T 01-11-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CDA09_18425 235a8b2e65c7143017713e5a246843af 293 SUPERFAMILY SSF53448 1 288 3.9E-91 T 01-11-2018 IPR029044 Nucleotide-diphospho-sugar transferases CDA09_18425 235a8b2e65c7143017713e5a246843af 293 Pfam PF00483 Nucleotidyl transferase 4 240 3.3E-68 T 01-11-2018 IPR005835 Nucleotidyl transferase domain GO:0009058|GO:0016779 CDA09_18425 235a8b2e65c7143017713e5a246843af 293 TIGRFAM TIGR01207 rmlA: glucose-1-phosphate thymidylyltransferase 4 288 4.9E-158 T 01-11-2018 IPR005907 Glucose-1-phosphate thymidylyltransferase, short form GO:0008879|GO:0045226 KEGG: 00521+2.7.7.24|KEGG: 00523+2.7.7.24|KEGG: 00525+2.7.7.24|MetaCyc: PWY-3221|MetaCyc: PWY-6808|MetaCyc: PWY-6942|MetaCyc: PWY-6953|MetaCyc: PWY-6973|MetaCyc: PWY-6974|MetaCyc: PWY-6976|MetaCyc: PWY-7104|MetaCyc: PWY-7301|MetaCyc: PWY-7312|MetaCyc: PWY-7315|MetaCyc: PWY-7316|MetaCyc: PWY-7318|MetaCyc: PWY-7413|MetaCyc: PWY-7414|MetaCyc: PWY-7440|MetaCyc: PWY-7657|MetaCyc: PWY-7688|MetaCyc: PWY-7814 CDA09_18425 235a8b2e65c7143017713e5a246843af 293 Gene3D G3DSA:3.90.550.10 1 292 2.0E-83 T 01-11-2018 IPR029044 Nucleotide-diphospho-sugar transferases CDA09_02720 989158a02621950f34c91c7813eaee2b 230 SUPERFAMILY SSF53955 101 218 1.47E-24 T 01-11-2018 IPR023346 Lysozyme-like domain superfamily CDA09_02720 989158a02621950f34c91c7813eaee2b 230 Pfam PF01464 Transglycosylase SLT domain 109 199 2.7E-17 T 01-11-2018 IPR008258 Transglycosylase SLT domain 1 CDA09_02720 989158a02621950f34c91c7813eaee2b 230 Gene3D G3DSA:1.10.530.10 89 219 1.3E-22 T 01-11-2018 CDA09_02955 d6f3a7f7e4e412aabc350b0defc20cc6 769 Pfam PF00263 Bacterial type II and III secretion system protein 421 583 2.0E-39 T 01-11-2018 IPR004846 Type II/III secretion system GO:0009306 CDA09_02955 d6f3a7f7e4e412aabc350b0defc20cc6 769 Gene3D G3DSA:3.30.1370.120 277 332 1.3E-7 T 01-11-2018 IPR038591 NolW-like superfamily CDA09_02955 d6f3a7f7e4e412aabc350b0defc20cc6 769 Pfam PF03958 Bacterial type II/III secretion system short domain 275 334 1.0E-8 T 01-11-2018 IPR005644 NolW-like CDA09_02955 d6f3a7f7e4e412aabc350b0defc20cc6 769 Gene3D G3DSA:1.25.40.10 18 171 1.8E-5 T 01-11-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 CDA09_02955 d6f3a7f7e4e412aabc350b0defc20cc6 769 PRINTS PR01032 Gene IV protein signature 440 463 3.7E-6 T 01-11-2018 CDA09_02955 d6f3a7f7e4e412aabc350b0defc20cc6 769 PRINTS PR01032 Gene IV protein signature 510 538 3.7E-6 T 01-11-2018 CDA09_02955 d6f3a7f7e4e412aabc350b0defc20cc6 769 PRINTS PR01032 Gene IV protein signature 563 585 3.7E-6 T 01-11-2018 CDA09_02955 d6f3a7f7e4e412aabc350b0defc20cc6 769 PRINTS PR00811 Bacterial general secretion pathway protein D signature 570 584 2.3E-11 T 01-11-2018 IPR001775 GspD/PilQ family CDA09_02955 d6f3a7f7e4e412aabc350b0defc20cc6 769 PRINTS PR00811 Bacterial general secretion pathway protein D signature 335 345 2.3E-11 T 01-11-2018 IPR001775 GspD/PilQ family CDA09_02955 d6f3a7f7e4e412aabc350b0defc20cc6 769 PRINTS PR00811 Bacterial general secretion pathway protein D signature 547 565 2.3E-11 T 01-11-2018 IPR001775 GspD/PilQ family CDA09_02955 d6f3a7f7e4e412aabc350b0defc20cc6 769 PRINTS PR00811 Bacterial general secretion pathway protein D signature 450 460 2.3E-11 T 01-11-2018 IPR001775 GspD/PilQ family CDA09_02955 d6f3a7f7e4e412aabc350b0defc20cc6 769 PRINTS PR00811 Bacterial general secretion pathway protein D signature 415 439 2.3E-11 T 01-11-2018 IPR001775 GspD/PilQ family CDA09_02955 d6f3a7f7e4e412aabc350b0defc20cc6 769 SMART SM00965 211 262 1.7E-4 T 01-11-2018 IPR011662 Secretin/TonB, short N-terminal domain GO:0019867 CDA09_02955 d6f3a7f7e4e412aabc350b0defc20cc6 769 Gene3D G3DSA:3.55.50.30 172 276 1.0E-11 T 01-11-2018 CDA09_05950 6260afbf4c0c39e6de13dd8101c374e6 337 Hamap MF_00409 Tetraacyldisaccharide 4'-kinase [lpxK]. 4 331 38.729 T 01-11-2018 IPR003758 Tetraacyldisaccharide 4'-kinase GO:0005524|GO:0009029|GO:0009245 KEGG: 00540+2.7.1.130 CDA09_05950 6260afbf4c0c39e6de13dd8101c374e6 337 TIGRFAM TIGR00682 lpxK: tetraacyldisaccharide 4'-kinase 21 320 1.7E-70 T 01-11-2018 IPR003758 Tetraacyldisaccharide 4'-kinase GO:0005524|GO:0009029|GO:0009245 KEGG: 00540+2.7.1.130 CDA09_05950 6260afbf4c0c39e6de13dd8101c374e6 337 SUPERFAMILY SSF52540 49 162 7.44E-10 T 01-11-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CDA09_05950 6260afbf4c0c39e6de13dd8101c374e6 337 Pfam PF02606 Tetraacyldisaccharide-1-P 4'-kinase 16 330 1.0E-105 T 01-11-2018 IPR003758 Tetraacyldisaccharide 4'-kinase GO:0005524|GO:0009029|GO:0009245 KEGG: 00540+2.7.1.130 CDA09_20450 56c9c0add0dacd2439c940c0290f13ea 245 SUPERFAMILY SSF110997 175 241 9.68E-12 T 01-11-2018 IPR036680 Sporulation-like domain superfamily GO:0042834 CDA09_20450 56c9c0add0dacd2439c940c0290f13ea 245 Gene3D G3DSA:3.30.70.1070 174 241 4.4E-6 T 01-11-2018 IPR036680 Sporulation-like domain superfamily GO:0042834 CDA09_20450 56c9c0add0dacd2439c940c0290f13ea 245 Pfam PF05036 Sporulation related domain 176 240 4.8E-7 T 01-11-2018 IPR007730 Sporulation-like domain GO:0042834 CDA09_10170 813c1ff30606e25b15e7cbe216431fcf 345 SUPERFAMILY SSF53850 27 335 2.57E-102 T 01-11-2018 CDA09_10170 813c1ff30606e25b15e7cbe216431fcf 345 Gene3D G3DSA:3.40.190.10 101 276 8.3E-127 T 01-11-2018 CDA09_10170 813c1ff30606e25b15e7cbe216431fcf 345 Pfam PF12849 PBP superfamily domain 26 305 3.0E-63 T 01-11-2018 IPR024370 PBP domain CDA09_10170 813c1ff30606e25b15e7cbe216431fcf 345 TIGRFAM TIGR00975 3a0107s03: phosphate ABC transporter, phosphate-binding protein PstS 27 334 9.9E-131 T 01-11-2018 IPR005673 Phosphate ABC transporter, substrate-binding protein PstS GO:0035435|GO:0042301|GO:0043190 CDA09_10170 813c1ff30606e25b15e7cbe216431fcf 345 PIRSF PIRSF002756 9 337 4.8E-110 T 01-11-2018 IPR005673 Phosphate ABC transporter, substrate-binding protein PstS GO:0035435|GO:0042301|GO:0043190 CDA09_10170 813c1ff30606e25b15e7cbe216431fcf 345 Gene3D G3DSA:3.40.190.10 27 323 8.3E-127 T 01-11-2018 CDA09_18065 dd0712c6b67235eae838e23eb36a23c8 221 Pfam PF01027 Inhibitor of apoptosis-promoting Bax1 20 215 3.4E-43 T 01-11-2018 IPR006214 Bax inhibitor 1-related CDA09_15265 e84ec35d047f69fed0b4efa0669f5ca9 527 SUPERFAMILY SSF46977 416 516 8.63E-30 T 01-11-2018 IPR037099 Fumarate reductase/succinate dehydrogenase flavoprotein-like, C-terminal domain superfamily GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-71403 CDA09_15265 e84ec35d047f69fed0b4efa0669f5ca9 527 Pfam PF02910 Fumarate reductase flavoprotein C-term 433 512 2.5E-12 T 01-11-2018 IPR015939 Fumarate reductase/succinate dehydrogenase flavoprotein-like, C-terminal GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-71403 CDA09_15265 e84ec35d047f69fed0b4efa0669f5ca9 527 Pfam PF00890 FAD binding domain 6 385 1.3E-99 T 01-11-2018 IPR003953 FAD-dependent oxidoreductase 2, FAD binding domain Reactome: R-HSA-611105|Reactome: R-HSA-71403 CDA09_15265 e84ec35d047f69fed0b4efa0669f5ca9 527 SUPERFAMILY SSF56425 231 346 8.22E-43 T 01-11-2018 IPR027477 Succinate dehydrogenase/fumarate reductase flavoprotein, catalytic domain superfamily Reactome: R-HSA-611105|Reactome: R-HSA-71403 CDA09_15265 e84ec35d047f69fed0b4efa0669f5ca9 527 SUPERFAMILY SSF51905 3 439 9.48E-74 T 01-11-2018 IPR036188 FAD/NAD(P)-binding domain superfamily CDA09_15265 e84ec35d047f69fed0b4efa0669f5ca9 527 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 348 370 3.2E-8 T 01-11-2018 CDA09_15265 e84ec35d047f69fed0b4efa0669f5ca9 527 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 7 26 3.2E-8 T 01-11-2018 CDA09_15265 e84ec35d047f69fed0b4efa0669f5ca9 527 Gene3D G3DSA:3.90.700.10 241 351 3.2E-157 T 01-11-2018 IPR027477 Succinate dehydrogenase/fumarate reductase flavoprotein, catalytic domain superfamily Reactome: R-HSA-611105|Reactome: R-HSA-71403 CDA09_15265 e84ec35d047f69fed0b4efa0669f5ca9 527 Gene3D G3DSA:1.20.58.100 416 526 1.9E-40 T 01-11-2018 CDA09_15265 e84ec35d047f69fed0b4efa0669f5ca9 527 TIGRFAM TIGR00551 nadB: L-aspartate oxidase 4 511 2.8E-196 T 01-11-2018 IPR005288 L-aspartate oxidase GO:0005737|GO:0008734|GO:0009435|GO:0055114 KEGG: 00250+1.4.3.16|KEGG: 00760+1.4.3.16|MetaCyc: PWY-5316|MetaCyc: PWY-7342 CDA09_15265 e84ec35d047f69fed0b4efa0669f5ca9 527 Gene3D G3DSA:3.50.50.60 6 397 3.2E-157 T 01-11-2018 IPR036188 FAD/NAD(P)-binding domain superfamily CDA09_15265 e84ec35d047f69fed0b4efa0669f5ca9 527 PIRSF PIRSF000171 331 516 4.7E-10 T 01-11-2018 CDA09_15265 e84ec35d047f69fed0b4efa0669f5ca9 527 PIRSF PIRSF000171 1 252 8.0E-20 T 01-11-2018 CDA09_20110 8b179fdc7347bd3d260c500ad362915f 387 PIRSF PIRSF026782 18 382 9.7E-97 T 01-11-2018 IPR002748 Cobalt-precorrin-5B C(1)-methyltransferase CbiD GO:0008168|GO:0009236 KEGG: 00860+2.1.1.195|MetaCyc: PWY-7377 CDA09_20110 8b179fdc7347bd3d260c500ad362915f 387 Hamap MF_00787 Cobalt-precorrin-5B C(1)-methyltransferase [cbiD]. 22 377 25.672 T 01-11-2018 IPR002748 Cobalt-precorrin-5B C(1)-methyltransferase CbiD GO:0008168|GO:0009236 KEGG: 00860+2.1.1.195|MetaCyc: PWY-7377 CDA09_20110 8b179fdc7347bd3d260c500ad362915f 387 Gene3D G3DSA:3.30.2110.10 24 199 5.1E-42 T 01-11-2018 IPR036074 CbiD superfamily GO:0008168|GO:0009236 KEGG: 00860+2.1.1.195|MetaCyc: PWY-7377 CDA09_20110 8b179fdc7347bd3d260c500ad362915f 387 TIGRFAM TIGR00312 cbiD: cobalamin biosynthesis protein CbiD 32 375 4.2E-63 T 01-11-2018 IPR002748 Cobalt-precorrin-5B C(1)-methyltransferase CbiD GO:0008168|GO:0009236 KEGG: 00860+2.1.1.195|MetaCyc: PWY-7377 CDA09_20110 8b179fdc7347bd3d260c500ad362915f 387 Pfam PF01888 CbiD 23 285 6.0E-83 T 01-11-2018 IPR002748 Cobalt-precorrin-5B C(1)-methyltransferase CbiD GO:0008168|GO:0009236 KEGG: 00860+2.1.1.195|MetaCyc: PWY-7377 CDA09_20110 8b179fdc7347bd3d260c500ad362915f 387 SUPERFAMILY SSF111342 18 302 1.83E-74 T 01-11-2018 IPR036074 CbiD superfamily GO:0008168|GO:0009236 KEGG: 00860+2.1.1.195|MetaCyc: PWY-7377 CDA09_11740 5acbdcc1e717554ab3c692930de370f2 455 Pfam PF07759 Protein of unknown function (DUF1615) 119 438 3.2E-134 T 01-11-2018 IPR011673 Protein of unknown function DUF1615 CDA09_11740 5acbdcc1e717554ab3c692930de370f2 455 ProDom PD041438 LIPOPROTEIN YAIW PRECURSOR SIGNAL MEMBRANE OUTER LIPOPROTEIN ECS0428 XAC0592 SECRETED 109 438 7.0E-127 T 01-11-2018 IPR011673 Protein of unknown function DUF1615 CDA09_06360 7b1686484fc9b6cb5d51c40821780777 309 SUPERFAMILY SSF103481 44 143 1.7E-13 T 01-11-2018 CDA09_06360 7b1686484fc9b6cb5d51c40821780777 309 Pfam PF00892 EamA-like transporter family 153 286 4.9E-18 T 01-11-2018 IPR000620 EamA domain GO:0016020|GO:0016021 CDA09_06360 7b1686484fc9b6cb5d51c40821780777 309 Pfam PF00892 EamA-like transporter family 13 140 2.2E-23 T 01-11-2018 IPR000620 EamA domain GO:0016020|GO:0016021 CDA09_06360 7b1686484fc9b6cb5d51c40821780777 309 SUPERFAMILY SSF103481 186 286 1.31E-11 T 01-11-2018 CDA09_09620 522aab09576d3c9b8309637319f6965c 296 SUPERFAMILY SSF54593 135 289 1.93E-33 T 01-11-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase CDA09_09620 522aab09576d3c9b8309637319f6965c 296 Gene3D G3DSA:3.10.180.10 2 126 3.7E-28 T 01-11-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase CDA09_09620 522aab09576d3c9b8309637319f6965c 296 Gene3D G3DSA:3.10.180.10 134 295 1.1E-51 T 01-11-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase CDA09_09620 522aab09576d3c9b8309637319f6965c 296 Pfam PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily 143 264 1.8E-16 T 01-11-2018 IPR004360 Glyoxalase/fosfomycin resistance/dioxygenase domain CDA09_09620 522aab09576d3c9b8309637319f6965c 296 SUPERFAMILY SSF54593 1 123 7.77E-18 T 01-11-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase CDA09_20275 47b41ee672fe05c04ae194684b3fb30d 367 SUPERFAMILY SSF56112 40 323 1.91E-31 T 01-11-2018 IPR011009 Protein kinase-like domain superfamily CDA09_20275 47b41ee672fe05c04ae194684b3fb30d 367 ProSitePatterns PS00108 Serine/Threonine protein kinases active-site signature. 165 177 - T 01-11-2018 IPR008271 Serine/threonine-protein kinase, active site GO:0004672|GO:0006468 CDA09_20275 47b41ee672fe05c04ae194684b3fb30d 367 SMART SM00220 26 340 2.9E-9 T 01-11-2018 IPR000719 Protein kinase domain GO:0004672|GO:0005524|GO:0006468 CDA09_20275 47b41ee672fe05c04ae194684b3fb30d 367 Gene3D G3DSA:1.10.510.10 139 362 6.4E-26 T 01-11-2018 CDA09_20275 47b41ee672fe05c04ae194684b3fb30d 367 Pfam PF00069 Protein kinase domain 87 253 6.2E-16 T 01-11-2018 IPR000719 Protein kinase domain GO:0004672|GO:0005524|GO:0006468 CDA09_00050 cb03b30e8cbd0af4f0e6d9266c27e56e 84 Gene3D G3DSA:3.40.1620.10 15 51 7.7E-6 T 01-11-2018 CDA09_00050 cb03b30e8cbd0af4f0e6d9266c27e56e 84 Pfam PF02604 Antitoxin Phd_YefM, type II toxin-antitoxin system 5 62 2.4E-9 T 01-11-2018 IPR006442 Type II toxin-antitoxin system, antitoxin Phd/YefM CDA09_00050 cb03b30e8cbd0af4f0e6d9266c27e56e 84 SUPERFAMILY SSF143120 4 51 3.66E-10 T 01-11-2018 IPR036165 YefM-like superfamily CDA09_00050 cb03b30e8cbd0af4f0e6d9266c27e56e 84 TIGRFAM TIGR01552 phd_fam: prevent-host-death family protein 19 53 3.2E-5 T 01-11-2018 CDA09_13900 76d833ec45f4e8811d65a30127e8a480 217 Gene3D G3DSA:1.10.357.10 2 202 4.2E-46 T 01-11-2018 CDA09_13900 76d833ec45f4e8811d65a30127e8a480 217 Pfam PF00440 Bacterial regulatory proteins, tetR family 6 48 9.1E-16 T 01-11-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 CDA09_13900 76d833ec45f4e8811d65a30127e8a480 217 SUPERFAMILY SSF48498 110 193 5.04E-9 T 01-11-2018 IPR036271 Tetracyclin repressor-like, C-terminal domain superfamily CDA09_13900 76d833ec45f4e8811d65a30127e8a480 217 SUPERFAMILY SSF46689 2 75 3.39E-17 T 01-11-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 CDA09_13900 76d833ec45f4e8811d65a30127e8a480 217 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 25 48 1.2E-8 T 01-11-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 CDA09_13900 76d833ec45f4e8811d65a30127e8a480 217 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 4 17 1.2E-8 T 01-11-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 CDA09_04240 e0438ae59d10a13b074ee8453819fb98 158 Pfam PF02470 MlaD protein 39 116 1.4E-20 T 01-11-2018 IPR003399 Mce/MlaD CDA09_04240 e0438ae59d10a13b074ee8453819fb98 158 TIGRFAM TIGR04430 OM_asym_MlaD: outer membrane lipid asymmetry maintenance protein MlaD 3 146 2.7E-59 T 01-11-2018 IPR030970 Probable phospholipid ABC transporter-binding protein MlaD GO:0015914 CDA09_18820 887323ec3cf3dd7d83e0474d287c461a 487 Pfam PF02321 Outer membrane efflux protein 31 214 3.2E-15 T 01-11-2018 IPR003423 Outer membrane efflux protein GO:0015562|GO:0055085 CDA09_18820 887323ec3cf3dd7d83e0474d287c461a 487 Pfam PF02321 Outer membrane efflux protein 239 420 6.3E-28 T 01-11-2018 IPR003423 Outer membrane efflux protein GO:0015562|GO:0055085 CDA09_18820 887323ec3cf3dd7d83e0474d287c461a 487 SUPERFAMILY SSF56954 28 437 2.88E-74 T 01-11-2018 CDA09_18820 887323ec3cf3dd7d83e0474d287c461a 487 TIGRFAM TIGR01844 type_I_sec_TolC: type I secretion outer membrane protein, TolC family 27 428 3.0E-81 T 01-11-2018 IPR010130 Type I secretion outer membrane protein, TolC GO:0015562|GO:0019867|GO:0055085 CDA09_18820 887323ec3cf3dd7d83e0474d287c461a 487 Gene3D G3DSA:1.20.1600.10 26 428 2.6E-79 T 01-11-2018 CDA09_22295 ae009821ddbc57874ac5fff3ca75e6f6 142 Gene3D G3DSA:2.40.50.100 1 65 1.9E-26 T 01-11-2018 CDA09_22295 ae009821ddbc57874ac5fff3ca75e6f6 142 TIGRFAM TIGR00638 Mop: molybdenum-pterin binding domain 1 68 5.5E-24 T 01-11-2018 IPR004606 Molybdenum-pterin binding GO:0015689 CDA09_22295 ae009821ddbc57874ac5fff3ca75e6f6 142 TIGRFAM TIGR00638 Mop: molybdenum-pterin binding domain 74 140 4.7E-23 T 01-11-2018 IPR004606 Molybdenum-pterin binding GO:0015689 CDA09_22295 ae009821ddbc57874ac5fff3ca75e6f6 142 Gene3D G3DSA:2.40.50.100 66 131 2.2E-27 T 01-11-2018 CDA09_22295 ae009821ddbc57874ac5fff3ca75e6f6 142 SUPERFAMILY SSF50331 48 138 5.95E-21 T 01-11-2018 IPR008995 Molybdate/tungstate binding, C-terminal CDA09_22295 ae009821ddbc57874ac5fff3ca75e6f6 142 SUPERFAMILY SSF50331 1 69 9.72E-21 T 01-11-2018 IPR008995 Molybdate/tungstate binding, C-terminal CDA09_22295 ae009821ddbc57874ac5fff3ca75e6f6 142 Pfam PF03459 TOBE domain 76 138 4.4E-16 T 01-11-2018 IPR005116 Transport-associated OB, type 1 CDA09_22295 ae009821ddbc57874ac5fff3ca75e6f6 142 Pfam PF03459 TOBE domain 4 66 6.4E-15 T 01-11-2018 IPR005116 Transport-associated OB, type 1 CDA09_22915 dc4c84885a0e247a260cb88d50965291 723 Pfam PF00271 Helicase conserved C-terminal domain 493 581 4.0E-6 T 01-11-2018 IPR001650 Helicase, C-terminal CDA09_22915 dc4c84885a0e247a260cb88d50965291 723 SMART SM00487 187 385 4.0E-14 T 01-11-2018 IPR014001 Helicase superfamily 1/2, ATP-binding domain CDA09_22915 dc4c84885a0e247a260cb88d50965291 723 Gene3D G3DSA:1.10.8.630 2 111 3.4E-29 T 01-11-2018 CDA09_22915 dc4c84885a0e247a260cb88d50965291 723 SMART SM00490 485 582 8.4E-7 T 01-11-2018 IPR001650 Helicase, C-terminal CDA09_22915 dc4c84885a0e247a260cb88d50965291 723 Gene3D G3DSA:3.40.50.300 180 372 4.5E-71 T 01-11-2018 CDA09_22915 dc4c84885a0e247a260cb88d50965291 723 SUPERFAMILY SSF52540 212 610 6.97E-28 T 01-11-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CDA09_22915 dc4c84885a0e247a260cb88d50965291 723 SUPERFAMILY SSF52540 187 365 3.13E-36 T 01-11-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CDA09_22915 dc4c84885a0e247a260cb88d50965291 723 Hamap MF_00983 Probable primosomal protein N' [priA]. 6 723 23.419 T 01-11-2018 IPR005259 Primosomal protein N' GO:0003677|GO:0004003|GO:0006260|GO:0032508 CDA09_22915 dc4c84885a0e247a260cb88d50965291 723 Pfam PF00270 DEAD/DEAH box helicase 211 353 4.6E-10 T 01-11-2018 IPR011545 DEAD/DEAH box helicase domain GO:0003676|GO:0005524 CDA09_22915 dc4c84885a0e247a260cb88d50965291 723 TIGRFAM TIGR00595 priA: primosomal protein N' 213 721 5.6E-174 T 01-11-2018 IPR005259 Primosomal protein N' GO:0003677|GO:0004003|GO:0006260|GO:0032508 CDA09_01830 afb9982e1be9641ab79810a26860e110 247 SUPERFAMILY SSF54285 22 76 9.65E-9 T 01-11-2018 IPR016155 Molybdopterin synthase/thiamin biosynthesis sulphur carrier, beta-grasp CDA09_01830 afb9982e1be9641ab79810a26860e110 247 Pfam PF01927 Mut7-C RNAse domain 96 239 1.8E-48 T 01-11-2018 IPR002782 Mut7-C RNAse domain CDA09_01830 afb9982e1be9641ab79810a26860e110 247 Gene3D G3DSA:3.10.20.30 1 78 7.4E-6 T 01-11-2018 IPR012675 Beta-grasp domain superfamily CDA09_01830 afb9982e1be9641ab79810a26860e110 247 Pfam PF14451 Mut7-C ubiquitin 1 80 5.2E-37 T 01-11-2018 IPR027798 Ubiquitin Mut7-C domain CDA09_18630 6d0d287341a288ab4c534a7373430eaf 175 Pfam PF10649 Protein of unknown function (DUF2478) 9 167 1.6E-56 T 01-11-2018 IPR018912 Protein of unknown function DUF2478 CDA09_10225 610a48a17b99d20fca207bfae9b66bb7 458 SUPERFAMILY SSF56935 27 458 7.32E-79 T 01-11-2018 CDA09_10225 610a48a17b99d20fca207bfae9b66bb7 458 Gene3D G3DSA:2.40.160.60 25 458 2.4E-138 T 01-11-2018 CDA09_10225 610a48a17b99d20fca207bfae9b66bb7 458 Pfam PF03349 Outer membrane protein transport protein (OMPP1/FadL/TodX) 17 458 8.4E-87 T 01-11-2018 IPR005017 Outer membrane protein transport protein (OMPP1/FadL/TodX) CDA09_17390 ee05ece852bbeebec2439d62438589e0 305 PIRSF PIRSF002849 3 305 3.7E-118 T 01-11-2018 CDA09_17390 ee05ece852bbeebec2439d62438589e0 305 Pfam PF07726 ATPase family associated with various cellular activities (AAA) 36 166 7.4E-63 T 01-11-2018 IPR011703 ATPase, AAA-3 GO:0005524|GO:0016887 CDA09_17390 ee05ece852bbeebec2439d62438589e0 305 Gene3D G3DSA:1.10.8.300 197 302 4.2E-24 T 01-11-2018 CDA09_17390 ee05ece852bbeebec2439d62438589e0 305 Gene3D G3DSA:3.40.50.300 17 182 5.8E-44 T 01-11-2018 CDA09_17390 ee05ece852bbeebec2439d62438589e0 305 SUPERFAMILY SSF52540 18 280 1.09E-40 T 01-11-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CDA09_06945 3fc4fa6ba2f51d20c3e9684e5c216e86 290 SUPERFAMILY SSF53223 1 121 4.89E-37 T 01-11-2018 CDA09_06945 3fc4fa6ba2f51d20c3e9684e5c216e86 290 Gene3D G3DSA:3.40.50.10860 8 280 7.2E-112 T 01-11-2018 CDA09_06945 3fc4fa6ba2f51d20c3e9684e5c216e86 290 Hamap MF_01576 Bifunctional protein FolD [folD]. 3 286 38.713 T 01-11-2018 IPR000672 Tetrahydrofolate dehydrogenase/cyclohydrolase GO:0004488|GO:0055114 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|MetaCyc: PWY-7909|Reactome: R-HSA-196757 CDA09_06945 3fc4fa6ba2f51d20c3e9684e5c216e86 290 ProSitePatterns PS00767 Tetrahydrofolate dehydrogenase/cyclohydrolase signature 2. 263 271 - T 01-11-2018 IPR020867 Tetrahydrofolate dehydrogenase/cyclohydrolase, conserved site GO:0003824|GO:0055114 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|MetaCyc: PWY-7909|Reactome: R-HSA-196757 CDA09_06945 3fc4fa6ba2f51d20c3e9684e5c216e86 290 PRINTS PR00085 Tetrahydrofolate dehydrogenase/cyclohydrolase family signature 109 130 6.3E-81 T 01-11-2018 IPR000672 Tetrahydrofolate dehydrogenase/cyclohydrolase GO:0004488|GO:0055114 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|MetaCyc: PWY-7909|Reactome: R-HSA-196757 CDA09_06945 3fc4fa6ba2f51d20c3e9684e5c216e86 290 PRINTS PR00085 Tetrahydrofolate dehydrogenase/cyclohydrolase family signature 242 258 6.3E-81 T 01-11-2018 IPR000672 Tetrahydrofolate dehydrogenase/cyclohydrolase GO:0004488|GO:0055114 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|MetaCyc: PWY-7909|Reactome: R-HSA-196757 CDA09_06945 3fc4fa6ba2f51d20c3e9684e5c216e86 290 PRINTS PR00085 Tetrahydrofolate dehydrogenase/cyclohydrolase family signature 74 101 6.3E-81 T 01-11-2018 IPR000672 Tetrahydrofolate dehydrogenase/cyclohydrolase GO:0004488|GO:0055114 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|MetaCyc: PWY-7909|Reactome: R-HSA-196757 CDA09_06945 3fc4fa6ba2f51d20c3e9684e5c216e86 290 PRINTS PR00085 Tetrahydrofolate dehydrogenase/cyclohydrolase family signature 259 277 6.3E-81 T 01-11-2018 IPR000672 Tetrahydrofolate dehydrogenase/cyclohydrolase GO:0004488|GO:0055114 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|MetaCyc: PWY-7909|Reactome: R-HSA-196757 CDA09_06945 3fc4fa6ba2f51d20c3e9684e5c216e86 290 PRINTS PR00085 Tetrahydrofolate dehydrogenase/cyclohydrolase family signature 33 55 6.3E-81 T 01-11-2018 IPR000672 Tetrahydrofolate dehydrogenase/cyclohydrolase GO:0004488|GO:0055114 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|MetaCyc: PWY-7909|Reactome: R-HSA-196757 CDA09_06945 3fc4fa6ba2f51d20c3e9684e5c216e86 290 PRINTS PR00085 Tetrahydrofolate dehydrogenase/cyclohydrolase family signature 154 174 6.3E-81 T 01-11-2018 IPR000672 Tetrahydrofolate dehydrogenase/cyclohydrolase GO:0004488|GO:0055114 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|MetaCyc: PWY-7909|Reactome: R-HSA-196757 CDA09_06945 3fc4fa6ba2f51d20c3e9684e5c216e86 290 PRINTS PR00085 Tetrahydrofolate dehydrogenase/cyclohydrolase family signature 203 232 6.3E-81 T 01-11-2018 IPR000672 Tetrahydrofolate dehydrogenase/cyclohydrolase GO:0004488|GO:0055114 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|MetaCyc: PWY-7909|Reactome: R-HSA-196757 CDA09_06945 3fc4fa6ba2f51d20c3e9684e5c216e86 290 SUPERFAMILY SSF51735 122 284 3.59E-53 T 01-11-2018 IPR036291 NAD(P)-binding domain superfamily CDA09_06945 3fc4fa6ba2f51d20c3e9684e5c216e86 290 Gene3D G3DSA:3.40.50.720 6 262 7.2E-112 T 01-11-2018 CDA09_06945 3fc4fa6ba2f51d20c3e9684e5c216e86 290 Pfam PF02882 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain 123 285 1.0E-73 T 01-11-2018 IPR020631 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain GO:0004488 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|MetaCyc: PWY-7909|Reactome: R-HSA-196757 CDA09_06945 3fc4fa6ba2f51d20c3e9684e5c216e86 290 Pfam PF00763 Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain 5 120 3.5E-37 T 01-11-2018 IPR020630 Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain GO:0004488|GO:0055114 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|MetaCyc: PWY-7909|Reactome: R-HSA-196757 CDA09_10205 1e6141ec865fd1fb91aacf8be80ab32f 111 Gene3D G3DSA:2.102.10.10 2 111 1.9E-39 T 01-11-2018 IPR036922 Rieske [2Fe-2S] iron-sulphur domain superfamily GO:0016491|GO:0051537|GO:0055114 CDA09_10205 1e6141ec865fd1fb91aacf8be80ab32f 111 Pfam PF00355 Rieske [2Fe-2S] domain 4 88 6.0E-17 T 01-11-2018 IPR017941 Rieske [2Fe-2S] iron-sulphur domain GO:0016491|GO:0051537|GO:0055114 CDA09_10205 1e6141ec865fd1fb91aacf8be80ab32f 111 SUPERFAMILY SSF50022 1 106 1.7E-28 T 01-11-2018 IPR036922 Rieske [2Fe-2S] iron-sulphur domain superfamily GO:0016491|GO:0051537|GO:0055114 CDA09_17205 e3b18e0bbd49ce4d25aff76a8e89bc02 151 Gene3D G3DSA:3.30.479.10 1 89 2.3E-23 T 01-11-2018 IPR038418 6-pyruvoyl tetrahydropterin synthase/QueD superfamily Reactome: R-HSA-1474151 CDA09_17205 e3b18e0bbd49ce4d25aff76a8e89bc02 151 Gene3D G3DSA:3.30.479.10 90 149 4.6E-11 T 01-11-2018 IPR038418 6-pyruvoyl tetrahydropterin synthase/QueD superfamily Reactome: R-HSA-1474151 CDA09_17205 e3b18e0bbd49ce4d25aff76a8e89bc02 151 SUPERFAMILY SSF55620 1 145 5.28E-39 T 01-11-2018 CDA09_17205 e3b18e0bbd49ce4d25aff76a8e89bc02 151 TIGRFAM TIGR03367 queuosine_QueD: queuosine biosynthesis protein QueD 3 115 3.9E-27 T 01-11-2018 IPR007115 6-pyruvoyl tetrahydropterin synthase/QueD family Reactome: R-HSA-1474151 CDA09_17205 e3b18e0bbd49ce4d25aff76a8e89bc02 151 Pfam PF01242 6-pyruvoyl tetrahydropterin synthase 2 144 1.5E-35 T 01-11-2018 IPR007115 6-pyruvoyl tetrahydropterin synthase/QueD family Reactome: R-HSA-1474151 CDA09_05875 93f7504007e106d174c8ab386ca11909 769 SUPERFAMILY SSF53649 54 581 7.85E-133 T 01-11-2018 IPR017850 Alkaline-phosphatase-like, core domain superfamily GO:0003824 CDA09_05875 93f7504007e106d174c8ab386ca11909 769 ProSitePatterns PS00523 Sulfatases signature 1. 99 111 - T 01-11-2018 IPR024607 Sulfatase, conserved site CDA09_05875 93f7504007e106d174c8ab386ca11909 769 Gene3D G3DSA:3.40.720.10 53 497 3.6E-119 T 01-11-2018 IPR017849 Alkaline phosphatase-like, alpha/beta/alpha GO:0003824 CDA09_05875 93f7504007e106d174c8ab386ca11909 769 Gene3D G3DSA:3.30.1120.10 499 589 2.5E-21 T 01-11-2018 CDA09_05875 93f7504007e106d174c8ab386ca11909 769 Pfam PF00884 Sulfatase 55 470 3.0E-85 T 01-11-2018 IPR000917 Sulfatase, N-terminal GO:0008484 CDA09_17360 e8b76779e7f654337a87f908293856d1 433 Gene3D G3DSA:3.40.50.150 73 427 8.2E-103 T 01-11-2018 CDA09_17360 e8b76779e7f654337a87f908293856d1 433 SUPERFAMILY SSF53335 61 432 2.29E-77 T 01-11-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase CDA09_17360 e8b76779e7f654337a87f908293856d1 433 ProSitePatterns PS01230 RNA methyltransferase trmA family signature 1. 362 393 - T 01-11-2018 IPR030390 RNA methyltransferase TrmA, active site CDA09_17360 e8b76779e7f654337a87f908293856d1 433 Hamap MF_01010 23S rRNA (uracil(1939)-C(5))-methyltransferase RlmD [rlmD]. 3 433 67.61 T 01-11-2018 IPR001566 23S rRNA (uracil(1939)-C(5))-methyltransferase RlmD GO:0003723|GO:0006396|GO:0008173 CDA09_17360 e8b76779e7f654337a87f908293856d1 433 Gene3D G3DSA:3.40.1350.30 120 262 8.2E-103 T 01-11-2018 CDA09_17360 e8b76779e7f654337a87f908293856d1 433 SUPERFAMILY SSF50249 5 58 1.66E-12 T 01-11-2018 IPR012340 Nucleic acid-binding, OB-fold CDA09_17360 e8b76779e7f654337a87f908293856d1 433 Pfam PF01938 TRAM domain 6 46 8.6E-6 T 01-11-2018 IPR002792 TRAM domain CDA09_17360 e8b76779e7f654337a87f908293856d1 433 Pfam PF05958 tRNA (Uracil-5-)-methyltransferase 259 432 9.2E-16 T 01-11-2018 IPR010280 (Uracil-5)-methyltransferase family GO:0006396|GO:0008173 CDA09_17360 e8b76779e7f654337a87f908293856d1 433 Gene3D G3DSA:2.40.50.140 3 72 3.4E-24 T 01-11-2018 CDA09_21340 859ce467e3a058a6509c3f3ba52024f7 601 Gene3D G3DSA:3.90.226.10 305 530 4.7E-155 T 01-11-2018 CDA09_21340 859ce467e3a058a6509c3f3ba52024f7 601 Gene3D G3DSA:3.90.226.10 86 304 4.7E-155 T 01-11-2018 CDA09_21340 859ce467e3a058a6509c3f3ba52024f7 601 Gene3D G3DSA:3.40.1750.10 177 488 4.7E-155 T 01-11-2018 CDA09_21340 859ce467e3a058a6509c3f3ba52024f7 601 SUPERFAMILY SSF52096 53 274 1.16E-21 T 01-11-2018 IPR029045 ClpP/crotonase-like domain superfamily CDA09_21340 859ce467e3a058a6509c3f3ba52024f7 601 SUPERFAMILY SSF52096 313 519 1.45E-38 T 01-11-2018 IPR029045 ClpP/crotonase-like domain superfamily CDA09_21340 859ce467e3a058a6509c3f3ba52024f7 601 Pfam PF01343 Peptidase family S49 382 532 1.2E-44 T 01-11-2018 IPR002142 Peptidase S49 GO:0006508|GO:0008233 CDA09_21340 859ce467e3a058a6509c3f3ba52024f7 601 Pfam PF01343 Peptidase family S49 129 280 1.8E-24 T 01-11-2018 IPR002142 Peptidase S49 GO:0006508|GO:0008233 CDA09_21340 859ce467e3a058a6509c3f3ba52024f7 601 TIGRFAM TIGR00706 SppA_dom: signal peptide peptidase SppA, 36K type 318 528 1.1E-49 T 01-11-2018 IPR004635 Peptidase S49, SppA GO:0006508|GO:0008233 CDA09_21340 859ce467e3a058a6509c3f3ba52024f7 601 PIRSF PIRSF001217 5 601 6.5E-188 T 01-11-2018 IPR004634 Peptidase S49, protease IV GO:0006465|GO:0008233|GO:0016021 CDA09_21340 859ce467e3a058a6509c3f3ba52024f7 601 TIGRFAM TIGR00705 SppA_67K: signal peptide peptidase SppA, 67K type 19 593 1.3E-148 T 01-11-2018 IPR004634 Peptidase S49, protease IV GO:0006465|GO:0008233|GO:0016021 CDA09_09490 73eb1736a1a9592d37f2fe47d644ddf9 460 Pfam PF07044 Protein of unknown function (DUF1329) 91 456 1.1E-114 T 01-11-2018 IPR010752 Protein of unknown function DUF1329 CDA09_02725 9b5873994905253e9b7fdcd0a8f4f43e 386 Gene3D G3DSA:3.40.640.10 5 386 3.7E-123 T 01-11-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 CDA09_02725 9b5873994905253e9b7fdcd0a8f4f43e 386 PRINTS PR00753 1-aminocyclopropane-1-carboxylate synthase signature 94 114 1.5E-11 T 01-11-2018 CDA09_02725 9b5873994905253e9b7fdcd0a8f4f43e 386 PRINTS PR00753 1-aminocyclopropane-1-carboxylate synthase signature 163 187 1.5E-11 T 01-11-2018 CDA09_02725 9b5873994905253e9b7fdcd0a8f4f43e 386 PRINTS PR00753 1-aminocyclopropane-1-carboxylate synthase signature 199 222 1.5E-11 T 01-11-2018 CDA09_02725 9b5873994905253e9b7fdcd0a8f4f43e 386 PRINTS PR00753 1-aminocyclopropane-1-carboxylate synthase signature 116 137 1.5E-11 T 01-11-2018 CDA09_02725 9b5873994905253e9b7fdcd0a8f4f43e 386 SUPERFAMILY SSF53383 5 383 1.84E-104 T 01-11-2018 IPR015424 Pyridoxal phosphate-dependent transferase CDA09_02725 9b5873994905253e9b7fdcd0a8f4f43e 386 Pfam PF00155 Aminotransferase class I and II 33 381 1.6E-60 T 01-11-2018 IPR004839 Aminotransferase, class I/classII GO:0009058|GO:0030170 CDA09_02725 9b5873994905253e9b7fdcd0a8f4f43e 386 ProSitePatterns PS00105 Aminotransferases class-I pyridoxal-phosphate attachment site. 231 244 - T 01-11-2018 IPR004838 Aminotransferases, class-I, pyridoxal-phosphate-binding site GO:0003824|GO:0009058|GO:0030170 CDA09_15835 5ae52a23a023a43e49ba2f6f16b6af32 214 SMART SM00479 44 191 1.6E-4 T 01-11-2018 IPR013520 Exonuclease, RNase T/DNA polymerase III CDA09_15835 5ae52a23a023a43e49ba2f6f16b6af32 214 Gene3D G3DSA:3.30.420.10 88 192 3.4E-14 T 01-11-2018 IPR036397 Ribonuclease H superfamily GO:0003676 CDA09_15835 5ae52a23a023a43e49ba2f6f16b6af32 214 Gene3D G3DSA:3.30.420.10 38 87 1.3E-5 T 01-11-2018 IPR036397 Ribonuclease H superfamily GO:0003676 CDA09_15835 5ae52a23a023a43e49ba2f6f16b6af32 214 Pfam PF00929 Exonuclease 46 94 8.5E-6 T 01-11-2018 IPR013520 Exonuclease, RNase T/DNA polymerase III CDA09_15835 5ae52a23a023a43e49ba2f6f16b6af32 214 SUPERFAMILY SSF53098 36 193 4.01E-28 T 01-11-2018 IPR012337 Ribonuclease H-like superfamily CDA09_09025 359794f1a855d653f3c5bdca95da4869 381 Pfam PF00441 Acyl-CoA dehydrogenase, C-terminal domain 226 372 7.1E-25 T 01-11-2018 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal GO:0016627|GO:0055114 CDA09_09025 359794f1a855d653f3c5bdca95da4869 381 Gene3D G3DSA:1.10.540.10 1 112 5.3E-22 T 01-11-2018 IPR037069 Acyl-CoA dehydrogenase/oxidase, N-terminal domain superfamily GO:0016627|GO:0050660|GO:0055114 CDA09_09025 359794f1a855d653f3c5bdca95da4869 381 SUPERFAMILY SSF47203 226 379 8.54E-31 T 01-11-2018 IPR036250 Acyl-CoA dehydrogenase-like, C-terminal GO:0016627|GO:0055114 CDA09_09025 359794f1a855d653f3c5bdca95da4869 381 Gene3D G3DSA:2.40.110.10 115 231 9.9E-28 T 01-11-2018 CDA09_09025 359794f1a855d653f3c5bdca95da4869 381 Pfam PF02770 Acyl-CoA dehydrogenase, middle domain 116 196 1.7E-17 T 01-11-2018 IPR006091 Acyl-CoA oxidase/dehydrogenase, central domain GO:0016627|GO:0055114 CDA09_09025 359794f1a855d653f3c5bdca95da4869 381 Pfam PF02771 Acyl-CoA dehydrogenase, N-terminal domain 5 112 2.3E-19 T 01-11-2018 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal GO:0016627|GO:0050660|GO:0055114 CDA09_09025 359794f1a855d653f3c5bdca95da4869 381 Gene3D G3DSA:1.20.140.10 232 378 7.8E-28 T 01-11-2018 CDA09_09025 359794f1a855d653f3c5bdca95da4869 381 SUPERFAMILY SSF56645 2 239 7.85E-59 T 01-11-2018 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain superfamily GO:0016627|GO:0055114 CDA09_15855 38a1859e55aa1ab81aeeb31a63596689 296 Gene3D G3DSA:2.40.290.10 8 184 1.7E-19 T 01-11-2018 IPR016194 SPOC-like, C-terminal domain superfamily CDA09_15855 38a1859e55aa1ab81aeeb31a63596689 296 SMART SM00559 55 187 2.1E-27 T 01-11-2018 IPR006164 Ku70/Ku80 beta-barrel domain GO:0003677|GO:0006303 Reactome: R-HSA-164843|Reactome: R-HSA-1834949|Reactome: R-HSA-3270619|Reactome: R-HSA-5693571|Reactome: R-HSA-6798695 CDA09_15855 38a1859e55aa1ab81aeeb31a63596689 296 Hamap MF_01875 Non-homologous end joining protein Ku [ku]. 3 259 28.914 T 01-11-2018 IPR009187 Non-homologous end joining protein Ku, prokaryotic type CDA09_15855 38a1859e55aa1ab81aeeb31a63596689 296 Pfam PF02735 Ku70/Ku80 beta-barrel domain 13 184 3.0E-34 T 01-11-2018 IPR006164 Ku70/Ku80 beta-barrel domain GO:0003677|GO:0006303 Reactome: R-HSA-164843|Reactome: R-HSA-1834949|Reactome: R-HSA-3270619|Reactome: R-HSA-5693571|Reactome: R-HSA-6798695 CDA09_15855 38a1859e55aa1ab81aeeb31a63596689 296 PIRSF PIRSF006493 1 295 5.3E-76 T 01-11-2018 IPR009187 Non-homologous end joining protein Ku, prokaryotic type CDA09_15855 38a1859e55aa1ab81aeeb31a63596689 296 SUPERFAMILY SSF100939 4 262 1.96E-46 T 01-11-2018 IPR016194 SPOC-like, C-terminal domain superfamily CDA09_15855 38a1859e55aa1ab81aeeb31a63596689 296 TIGRFAM TIGR02772 Ku_bact: Ku protein 10 261 1.3E-71 T 01-11-2018 IPR009187 Non-homologous end joining protein Ku, prokaryotic type CDA09_05390 2bf402edb1ee7027edd9b7244c8f1602 143 Gene3D G3DSA:3.10.450.50 1 143 6.0E-42 T 01-11-2018 CDA09_05390 2bf402edb1ee7027edd9b7244c8f1602 143 Pfam PF13474 SnoaL-like domain 14 127 7.3E-18 T 01-11-2018 IPR037401 SnoaL-like domain CDA09_05390 2bf402edb1ee7027edd9b7244c8f1602 143 SUPERFAMILY SSF54427 6 128 3.83E-31 T 01-11-2018 IPR032710 NTF2-like domain superfamily CDA09_13310 6abf913a06cd98495cf2720e32a42d17 335 TIGRFAM TIGR01946 rnfD: electron transport complex, RnfABCDGE type, D subunit 4 328 2.3E-106 T 01-11-2018 IPR011303 Ion-translocating oxidoreductase complex Rnf, subunit D GO:0016021|GO:0022900 CDA09_13310 6abf913a06cd98495cf2720e32a42d17 335 Hamap MF_00462 Ion-translocating oxidoreductase complex subunit D [rsxD]. 1 330 23.386 T 01-11-2018 IPR011303 Ion-translocating oxidoreductase complex Rnf, subunit D GO:0016021|GO:0022900 CDA09_13310 6abf913a06cd98495cf2720e32a42d17 335 Pfam PF03116 NQR2, RnfD, RnfE family 3 328 1.3E-92 T 01-11-2018 IPR004338 Ion-translocating oxidoreductase NqrB/RnfD GO:0016020|GO:0055085 CDA09_15255 84f4143d5407ffe500c9e5eed1c85ae1 185 Pfam PF03872 Anti sigma-E protein RseA, N-terminal domain 2 73 1.9E-13 T 01-11-2018 IPR005572 Anti sigma-E protein RseA, N-terminal GO:0016989 CDA09_15255 84f4143d5407ffe500c9e5eed1c85ae1 185 SUPERFAMILY SSF89069 1 66 5.62E-12 T 01-11-2018 IPR036147 Anti sigma-E protein RseA, N-terminal domain superfamily GO:0016989 CDA09_15255 84f4143d5407ffe500c9e5eed1c85ae1 185 Gene3D G3DSA:1.10.10.880 1 66 7.8E-12 T 01-11-2018 IPR036147 Anti sigma-E protein RseA, N-terminal domain superfamily GO:0016989 CDA09_00595 bfc549764a693ef92c1c726380b1b064 323 Hamap MF_02071 Endolytic peptidoglycan transglycosylase RlpA [rlpA]. 7 202 23.945 T 01-11-2018 IPR034718 Endolytic peptidoglycan transglycosylase RlpA GO:0016829 CDA09_00595 bfc549764a693ef92c1c726380b1b064 323 Pfam PF03330 Lytic transglycolase 112 199 3.8E-25 T 01-11-2018 IPR009009 RlpA-like protein, double-psi beta-barrel domain CDA09_00595 bfc549764a693ef92c1c726380b1b064 323 Pfam PF05036 Sporulation related domain 247 322 8.0E-10 T 01-11-2018 IPR007730 Sporulation-like domain GO:0042834 CDA09_00595 bfc549764a693ef92c1c726380b1b064 323 SUPERFAMILY SSF110997 247 321 3.79E-9 T 01-11-2018 IPR036680 Sporulation-like domain superfamily GO:0042834 CDA09_00595 bfc549764a693ef92c1c726380b1b064 323 SUPERFAMILY SSF50685 112 194 2.2E-8 T 01-11-2018 IPR036908 RlpA-like domain superfamily CDA09_00595 bfc549764a693ef92c1c726380b1b064 323 TIGRFAM TIGR00413 rlpA: rare lipoprotein A 112 210 5.5E-36 T 01-11-2018 IPR012997 Rare lipoprotein A CDA09_00595 bfc549764a693ef92c1c726380b1b064 323 Gene3D G3DSA:2.40.40.10 110 202 5.1E-33 T 01-11-2018 IPR036908 RlpA-like domain superfamily CDA09_04005 2e9daf8b228b80ff8e2fe8edb2fe32c9 214 SUPERFAMILY SSF55120 4 213 1.6E-61 T 01-11-2018 IPR020103 Pseudouridine synthase, catalytic domain superfamily GO:0001522|GO:0003723|GO:0009451|GO:0009982 CDA09_04005 2e9daf8b228b80ff8e2fe8edb2fe32c9 214 Pfam PF00849 RNA pseudouridylate synthase 15 163 3.9E-30 T 01-11-2018 IPR006145 Pseudouridine synthase, RsuA/RluB/C/D/E/F GO:0001522|GO:0003723|GO:0009451|GO:0009982 CDA09_04005 2e9daf8b228b80ff8e2fe8edb2fe32c9 214 Gene3D G3DSA:3.30.2350.10 2 213 2.7E-70 T 01-11-2018 CDA09_04005 2e9daf8b228b80ff8e2fe8edb2fe32c9 214 ProSitePatterns PS01129 Rlu family of pseudouridine synthase signature. 52 66 - T 01-11-2018 IPR006224 Pseudouridine synthase, RluC/RluD, conserved site GO:0001522|GO:0003723|GO:0009451|GO:0009982 CDA09_15030 f01a3b98e883307c3e937bfbeb131db0 127 PIRSF PIRSF018634 2 125 9.8E-33 T 01-11-2018 IPR009387 Toxin HigB-2 CDA09_15030 f01a3b98e883307c3e937bfbeb131db0 127 Pfam PF06296 RelE toxin of RelE / RelB toxin-antitoxin system 3 121 1.0E-44 T 01-11-2018 IPR009387 Toxin HigB-2 CDA09_19345 c5a7e8aa05738f9199950162389ff526 791 SUPERFAMILY SSF82866 557 771 5.49E-34 T 01-11-2018 CDA09_19345 c5a7e8aa05738f9199950162389ff526 791 SUPERFAMILY SSF82866 168 382 2.49E-26 T 01-11-2018 CDA09_19345 c5a7e8aa05738f9199950162389ff526 791 Gene3D G3DSA:1.20.1640.10 601 774 3.2E-11 T 01-11-2018 CDA09_19345 c5a7e8aa05738f9199950162389ff526 791 Pfam PF03176 MMPL family 451 768 8.7E-22 T 01-11-2018 IPR004869 Membrane transport protein MMPL domain GO:0016020 CDA09_19345 c5a7e8aa05738f9199950162389ff526 791 Pfam PF03176 MMPL family 119 382 4.2E-11 T 01-11-2018 IPR004869 Membrane transport protein MMPL domain GO:0016020 CDA09_01540 b5fe29092171534f80889e436c62afdb 857 SUPERFAMILY SSF48695 62 549 3.71E-14 T 01-11-2018 IPR036280 Multiheme cytochrome superfamily CDA09_01540 b5fe29092171534f80889e436c62afdb 857 SUPERFAMILY SSF48695 230 751 9.77E-11 T 01-11-2018 IPR036280 Multiheme cytochrome superfamily CDA09_01540 b5fe29092171534f80889e436c62afdb 857 Pfam PF09699 Doubled CXXCH motif (Paired_CXXCH_1) 319 380 9.6E-5 T 01-11-2018 IPR010177 Doubled CXXCH motif CDA09_01540 b5fe29092171534f80889e436c62afdb 857 Pfam PF09699 Doubled CXXCH motif (Paired_CXXCH_1) 653 711 1.8E-6 T 01-11-2018 IPR010177 Doubled CXXCH motif CDA09_01540 b5fe29092171534f80889e436c62afdb 857 Pfam PF09699 Doubled CXXCH motif (Paired_CXXCH_1) 232 277 7.5E-6 T 01-11-2018 IPR010177 Doubled CXXCH motif CDA09_14755 a9716fc5e165c6a1c974c744557ad636 216 SUPERFAMILY SSF53271 1 207 1.84E-38 T 01-11-2018 IPR029057 Phosphoribosyltransferase-like CDA09_14755 a9716fc5e165c6a1c974c744557ad636 216 Gene3D G3DSA:3.40.50.2020 2 201 6.6E-62 T 01-11-2018 CDA09_14755 a9716fc5e165c6a1c974c744557ad636 216 Gene3D G3DSA:3.30.1310.20 52 114 6.6E-62 T 01-11-2018 CDA09_14755 a9716fc5e165c6a1c974c744557ad636 216 Pfam PF00156 Phosphoribosyl transferase domain 5 193 7.9E-26 T 01-11-2018 IPR000836 Phosphoribosyltransferase domain GO:0009116 CDA09_08555 6ff706b8457746eb510739823fa12d10 254 SUPERFAMILY SSF111364 12 254 2.88E-29 T 01-11-2018 IPR036777 Nucleoside-specific channel-forming protein, Tsx-like superfamily GO:0009279 CDA09_08555 6ff706b8457746eb510739823fa12d10 254 Pfam PF03502 Nucleoside-specific channel-forming protein, Tsx 38 154 1.0E-6 T 01-11-2018 IPR018013 Nucleoside-specific channel-forming protein, Tsx-like GO:0009279 CDA09_08555 6ff706b8457746eb510739823fa12d10 254 Gene3D G3DSA:2.40.230.20 3 206 1.2E-13 T 01-11-2018 IPR036777 Nucleoside-specific channel-forming protein, Tsx-like superfamily GO:0009279 CDA09_03880 9cc6af44cf4473a50ba46069fc8b8b45 291 Gene3D G3DSA:3.40.50.300 53 198 1.7E-10 T 01-11-2018 CDA09_03880 9cc6af44cf4473a50ba46069fc8b8b45 291 Pfam PF05673 Protein of unknown function (DUF815) 34 284 1.3E-108 T 01-11-2018 IPR008533 Domain of unknown function DUF815 CDA09_03880 9cc6af44cf4473a50ba46069fc8b8b45 291 SUPERFAMILY SSF52540 57 255 1.44E-25 T 01-11-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CDA09_00375 ad5b9110dd8531c64ed267d881eb6b83 377 Gene3D G3DSA:3.40.640.10 38 270 8.3E-125 T 01-11-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 CDA09_00375 ad5b9110dd8531c64ed267d881eb6b83 377 PIRSF PIRSF000524 17 377 8.3E-46 T 01-11-2018 IPR024169 Serine-pyruvate aminotransferase/2-aminoethylphosphonate-pyruvate transaminase KEGG: 00440+2.6.1.37|MetaCyc: PWY-6832|Reactome: R-HSA-389661|Reactome: R-HSA-9033241 CDA09_00375 ad5b9110dd8531c64ed267d881eb6b83 377 Pfam PF00266 Aminotransferase class-V 21 341 9.2E-15 T 01-11-2018 IPR000192 Aminotransferase class V domain CDA09_00375 ad5b9110dd8531c64ed267d881eb6b83 377 Gene3D G3DSA:3.90.1150.10 271 370 8.3E-125 T 01-11-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 CDA09_00375 ad5b9110dd8531c64ed267d881eb6b83 377 SUPERFAMILY SSF53383 7 373 8.31E-78 T 01-11-2018 IPR015424 Pyridoxal phosphate-dependent transferase CDA09_18695 88cf401b72e1a8177fce9f27b0c48c79 315 Pfam PF08543 Phosphomethylpyrimidine kinase 199 295 6.5E-14 T 01-11-2018 IPR013749 Pyridoxamine kinase/Phosphomethylpyrimidine kinase Reactome: R-HSA-6798695|Reactome: R-HSA-964975 CDA09_18695 88cf401b72e1a8177fce9f27b0c48c79 315 Pfam PF08543 Phosphomethylpyrimidine kinase 7 147 1.3E-31 T 01-11-2018 IPR013749 Pyridoxamine kinase/Phosphomethylpyrimidine kinase Reactome: R-HSA-6798695|Reactome: R-HSA-964975 CDA09_18695 88cf401b72e1a8177fce9f27b0c48c79 315 SUPERFAMILY SSF53613 198 305 3.04E-19 T 01-11-2018 IPR029056 Ribokinase-like CDA09_18695 88cf401b72e1a8177fce9f27b0c48c79 315 SUPERFAMILY SSF53613 1 147 1.58E-27 T 01-11-2018 IPR029056 Ribokinase-like CDA09_13650 e2434ab7dc87abee23bb6479a1b61458 187 Pfam PF00866 Ring hydroxylating beta subunit 34 178 1.7E-37 T 01-11-2018 IPR000391 Ring-hydroxylating dioxygenase beta subunit GO:0006725|GO:0055114 CDA09_13650 e2434ab7dc87abee23bb6479a1b61458 187 Gene3D G3DSA:3.10.450.50 3 187 8.0E-55 T 01-11-2018 CDA09_13650 e2434ab7dc87abee23bb6479a1b61458 187 SUPERFAMILY SSF54427 14 187 5.39E-43 T 01-11-2018 IPR032710 NTF2-like domain superfamily CDA09_03405 3973516c33af9594f0b2e56abd3860b0 437 TIGRFAM TIGR01346 isocit_lyase: isocitrate lyase 258 436 3.1E-84 T 01-11-2018 IPR006254 Isocitrate lyase GO:0004451|GO:0019752 KEGG: 00630+4.1.3.1|MetaCyc: PWY-6969 CDA09_03405 3973516c33af9594f0b2e56abd3860b0 437 TIGRFAM TIGR01346 isocit_lyase: isocitrate lyase 10 257 1.2E-107 T 01-11-2018 IPR006254 Isocitrate lyase GO:0004451|GO:0019752 KEGG: 00630+4.1.3.1|MetaCyc: PWY-6969 CDA09_03405 3973516c33af9594f0b2e56abd3860b0 437 PIRSF PIRSF001362 1 437 9.5E-214 T 01-11-2018 IPR006254 Isocitrate lyase GO:0004451|GO:0019752 KEGG: 00630+4.1.3.1|MetaCyc: PWY-6969 CDA09_03405 3973516c33af9594f0b2e56abd3860b0 437 SUPERFAMILY SSF51621 6 436 3.1E-150 T 01-11-2018 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain superfamily GO:0003824 CDA09_03405 3973516c33af9594f0b2e56abd3860b0 437 Pfam PF00463 Isocitrate lyase family 14 257 6.0E-61 T 01-11-2018 IPR006254 Isocitrate lyase GO:0004451|GO:0019752 KEGG: 00630+4.1.3.1|MetaCyc: PWY-6969 CDA09_03405 3973516c33af9594f0b2e56abd3860b0 437 Pfam PF00463 Isocitrate lyase family 258 436 1.1E-50 T 01-11-2018 IPR006254 Isocitrate lyase GO:0004451|GO:0019752 KEGG: 00630+4.1.3.1|MetaCyc: PWY-6969 CDA09_03405 3973516c33af9594f0b2e56abd3860b0 437 ProSitePatterns PS00161 Isocitrate lyase signature. 195 200 - T 01-11-2018 IPR018523 Isocitrate lyase/phosphorylmutase, conserved site GO:0003824 CDA09_03405 3973516c33af9594f0b2e56abd3860b0 437 Gene3D G3DSA:3.20.20.60 1 419 4.0E-177 T 01-11-2018 CDA09_07095 3a2ff7fcd482a078783396cc79089e04 167 PIRSF PIRSF002094 1 167 3.0E-52 T 01-11-2018 IPR005632 Chaperone protein Skp GO:0051082 CDA09_07095 3a2ff7fcd482a078783396cc79089e04 167 SMART SM00935 12 164 3.8E-59 T 01-11-2018 IPR005632 Chaperone protein Skp GO:0051082 CDA09_07095 3a2ff7fcd482a078783396cc79089e04 167 Gene3D G3DSA:3.30.910.20 23 163 8.6E-42 T 01-11-2018 IPR024930 Skp domain superfamily CDA09_07095 3a2ff7fcd482a078783396cc79089e04 167 Pfam PF03938 Outer membrane protein (OmpH-like) 9 163 1.2E-38 T 01-11-2018 IPR005632 Chaperone protein Skp GO:0051082 CDA09_07095 3a2ff7fcd482a078783396cc79089e04 167 SUPERFAMILY SSF111384 23 163 4.32E-37 T 01-11-2018 CDA09_03420 856d0110de4888078ef1bbb5b684c145 102 Gene3D G3DSA:3.30.1390.10 1 102 5.0E-42 T 01-11-2018 IPR014719 Ribosomal protein L7/L12, C-terminal/adaptor protein ClpS-like CDA09_03420 856d0110de4888078ef1bbb5b684c145 102 Pfam PF02617 ATP-dependent Clp protease adaptor protein ClpS 19 97 7.2E-34 T 01-11-2018 IPR003769 Adaptor protein ClpS, core GO:0030163 Reactome: R-HSA-983168 CDA09_03420 856d0110de4888078ef1bbb5b684c145 102 SUPERFAMILY SSF54736 17 101 2.72E-33 T 01-11-2018 IPR014719 Ribosomal protein L7/L12, C-terminal/adaptor protein ClpS-like CDA09_03420 856d0110de4888078ef1bbb5b684c145 102 Hamap MF_00302 ATP-dependent Clp protease adapter protein ClpS [clpS]. 2 97 29.219 T 01-11-2018 IPR022935 ATP-dependent Clp protease adaptor protein ClpS CDA09_10000 9f535dc5c56fd7d199e5ef89f9d552c2 259 Gene3D G3DSA:1.10.12.10 204 259 1.8E-15 T 01-11-2018 IPR014748 Enoyl-CoA hydratase, C-terminal CDA09_10000 9f535dc5c56fd7d199e5ef89f9d552c2 259 Gene3D G3DSA:3.90.226.10 4 203 1.2E-64 T 01-11-2018 CDA09_10000 9f535dc5c56fd7d199e5ef89f9d552c2 259 ProSitePatterns PS00166 Enoyl-CoA hydratase/isomerase signature. 102 122 - T 01-11-2018 IPR018376 Enoyl-CoA hydratase/isomerase, conserved site GO:0003824 CDA09_10000 9f535dc5c56fd7d199e5ef89f9d552c2 259 SUPERFAMILY SSF52096 9 258 1.51E-75 T 01-11-2018 IPR029045 ClpP/crotonase-like domain superfamily CDA09_10000 9f535dc5c56fd7d199e5ef89f9d552c2 259 Pfam PF00378 Enoyl-CoA hydratase/isomerase 14 257 9.9E-58 T 01-11-2018 IPR001753 Enoyl-CoA hydratase/isomerase GO:0003824 CDA09_12045 bb77604231fa843ce4b87223a04cb51b 301 Pfam PF04536 TPM domain 39 162 2.0E-33 T 01-11-2018 IPR007621 TPM domain CDA09_12045 bb77604231fa843ce4b87223a04cb51b 301 Gene3D G3DSA:3.10.310.50 24 172 5.8E-43 T 01-11-2018 CDA09_17970 162d3906def075d562a66ca25c31bea2 191 Pfam PF00117 Glutamine amidotransferase class-I 4 186 1.8E-58 T 01-11-2018 IPR017926 Glutamine amidotransferase CDA09_17970 162d3906def075d562a66ca25c31bea2 191 SUPERFAMILY SSF52317 1 187 7.64E-58 T 01-11-2018 IPR029062 Class I glutamine amidotransferase-like CDA09_17970 162d3906def075d562a66ca25c31bea2 191 PRINTS PR00097 Anthranilate synthase component II signature 47 56 1.1E-36 T 01-11-2018 CDA09_17970 162d3906def075d562a66ca25c31bea2 191 PRINTS PR00097 Anthranilate synthase component II signature 74 85 1.1E-36 T 01-11-2018 CDA09_17970 162d3906def075d562a66ca25c31bea2 191 PRINTS PR00097 Anthranilate synthase component II signature 164 177 1.1E-36 T 01-11-2018 CDA09_17970 162d3906def075d562a66ca25c31bea2 191 PRINTS PR00097 Anthranilate synthase component II signature 99 107 1.1E-36 T 01-11-2018 CDA09_17970 162d3906def075d562a66ca25c31bea2 191 PRINTS PR00097 Anthranilate synthase component II signature 2 16 1.1E-36 T 01-11-2018 CDA09_17970 162d3906def075d562a66ca25c31bea2 191 PRINTS PR00097 Anthranilate synthase component II signature 119 131 1.1E-36 T 01-11-2018 CDA09_17970 162d3906def075d562a66ca25c31bea2 191 PRINTS PR00099 Carbamoyl-phosphate synthase protein GATase domain signature 44 58 1.2E-5 T 01-11-2018 CDA09_17970 162d3906def075d562a66ca25c31bea2 191 PRINTS PR00099 Carbamoyl-phosphate synthase protein GATase domain signature 74 90 1.2E-5 T 01-11-2018 CDA09_17970 162d3906def075d562a66ca25c31bea2 191 TIGRFAM TIGR00566 trpG_papA: glutamine amidotransferase of anthranilate synthase or aminodeoxychorismate synthase 1 186 2.3E-82 T 01-11-2018 IPR006221 Anthranilate synthase/para-aminobenzoate synthase like domain KEGG: 00400+4.1.3.27|KEGG: 00405+4.1.3.27|MetaCyc: PWY-5958|MetaCyc: PWY-6660|MetaCyc: PWY-6661 CDA09_17970 162d3906def075d562a66ca25c31bea2 191 Gene3D G3DSA:3.40.50.880 2 191 6.5E-64 T 01-11-2018 IPR029062 Class I glutamine amidotransferase-like CDA09_17970 162d3906def075d562a66ca25c31bea2 191 PRINTS PR00096 Glutamine amidotransferase superfamily signature 47 56 1.8E-13 T 01-11-2018 CDA09_17970 162d3906def075d562a66ca25c31bea2 191 PRINTS PR00096 Glutamine amidotransferase superfamily signature 164 177 1.8E-13 T 01-11-2018 CDA09_17970 162d3906def075d562a66ca25c31bea2 191 PRINTS PR00096 Glutamine amidotransferase superfamily signature 74 85 1.8E-13 T 01-11-2018 CDA09_20635 3df493976fd48c49eb977b4c45d29010 469 SUPERFAMILY SSF141322 390 456 5.89E-12 T 01-11-2018 CDA09_20635 3df493976fd48c49eb977b4c45d29010 469 Gene3D G3DSA:2.40.50.140 395 463 3.5E-12 T 01-11-2018 CDA09_20635 3df493976fd48c49eb977b4c45d29010 469 SUPERFAMILY SSF52096 27 217 3.65E-26 T 01-11-2018 IPR029045 ClpP/crotonase-like domain superfamily CDA09_20635 3df493976fd48c49eb977b4c45d29010 469 Pfam PF01957 NfeD-like C-terminal, partner-binding 319 455 3.9E-34 T 01-11-2018 IPR002810 NfeD-like, C-terminal domain CDA09_20635 3df493976fd48c49eb977b4c45d29010 469 Gene3D G3DSA:3.90.226.10 27 269 8.6E-59 T 01-11-2018 CDA09_03915 d8c31ec31eb6bb8809e9f6c0d85b2646 242 SUPERFAMILY SSF53067 2 112 7.34E-26 T 01-11-2018 CDA09_03915 d8c31ec31eb6bb8809e9f6c0d85b2646 242 Pfam PF03309 Type III pantothenate kinase 2 193 4.3E-55 T 01-11-2018 IPR004619 Type III pantothenate kinase GO:0004594 KEGG: 00770+2.7.1.33|MetaCyc: PWY-3961 CDA09_03915 d8c31ec31eb6bb8809e9f6c0d85b2646 242 Gene3D G3DSA:3.30.420.490 115 228 1.1E-73 T 01-11-2018 CDA09_03915 d8c31ec31eb6bb8809e9f6c0d85b2646 242 TIGRFAM TIGR00671 baf: pantothenate kinase, type III 3 233 1.3E-26 T 01-11-2018 IPR004619 Type III pantothenate kinase GO:0004594 KEGG: 00770+2.7.1.33|MetaCyc: PWY-3961 CDA09_03915 d8c31ec31eb6bb8809e9f6c0d85b2646 242 Hamap MF_01274 Type III pantothenate kinase [coaX]. 1 240 18.749 T 01-11-2018 IPR004619 Type III pantothenate kinase GO:0004594 KEGG: 00770+2.7.1.33|MetaCyc: PWY-3961 CDA09_03915 d8c31ec31eb6bb8809e9f6c0d85b2646 242 Gene3D G3DSA:3.30.420.40 3 233 1.1E-73 T 01-11-2018 CDA09_03915 d8c31ec31eb6bb8809e9f6c0d85b2646 242 SUPERFAMILY SSF53067 114 235 2.59E-29 T 01-11-2018 CDA09_17635 5661f7f27f2e6488496c5e1575e98bf3 260 SUPERFAMILY SSF103088 149 258 9.94E-33 T 01-11-2018 IPR036737 OmpA-like domain superfamily CDA09_17635 5661f7f27f2e6488496c5e1575e98bf3 260 Gene3D G3DSA:3.40.1520.20 29 136 1.8E-9 T 01-11-2018 CDA09_17635 5661f7f27f2e6488496c5e1575e98bf3 260 Pfam PF04972 BON domain 31 67 0.0045 T 01-11-2018 IPR007055 BON domain CDA09_17635 5661f7f27f2e6488496c5e1575e98bf3 260 Pfam PF00691 OmpA family 158 252 4.1E-21 T 01-11-2018 IPR006665 OmpA-like domain CDA09_17635 5661f7f27f2e6488496c5e1575e98bf3 260 PRINTS PR01021 OMPA domain signature 188 203 1.8E-10 T 01-11-2018 IPR006664 Outer membrane protein, bacterial GO:0009279|GO:0016021 CDA09_17635 5661f7f27f2e6488496c5e1575e98bf3 260 PRINTS PR01021 OMPA domain signature 203 219 1.8E-10 T 01-11-2018 IPR006664 Outer membrane protein, bacterial GO:0009279|GO:0016021 CDA09_17635 5661f7f27f2e6488496c5e1575e98bf3 260 PRINTS PR01021 OMPA domain signature 158 180 1.8E-10 T 01-11-2018 IPR006664 Outer membrane protein, bacterial GO:0009279|GO:0016021 CDA09_17635 5661f7f27f2e6488496c5e1575e98bf3 260 Gene3D G3DSA:3.30.1330.60 138 260 1.2E-35 T 01-11-2018 IPR036737 OmpA-like domain superfamily CDA09_04435 0a41459da2f37eb2f3c7e4b3d8f76d46 380 TIGRFAM TIGR03300 assembly_YfgL: outer membrane assembly lipoprotein YfgL 7 377 6.4E-128 T 01-11-2018 IPR017687 Outer membrane protein assembly factor BamB CDA09_04435 0a41459da2f37eb2f3c7e4b3d8f76d46 380 SUPERFAMILY SSF50998 25 364 5.89E-71 T 01-11-2018 IPR011047 Quinoprotein alcohol dehydrogenase-like superfamily CDA09_04435 0a41459da2f37eb2f3c7e4b3d8f76d46 380 Hamap MF_00923 Outer membrane protein assembly factor BamB [bamB]. 2 379 35.717 T 01-11-2018 IPR017687 Outer membrane protein assembly factor BamB CDA09_04435 0a41459da2f37eb2f3c7e4b3d8f76d46 380 Gene3D G3DSA:2.130.10.10 26 379 4.1E-85 T 01-11-2018 IPR015943 WD40/YVTN repeat-like-containing domain superfamily GO:0005515 CDA09_04435 0a41459da2f37eb2f3c7e4b3d8f76d46 380 SMART SM00564 185 217 47.0 T 01-11-2018 IPR018391 Pyrrolo-quinoline quinone beta-propeller repeat CDA09_04435 0a41459da2f37eb2f3c7e4b3d8f76d46 380 SMART SM00564 63 92 720.0 T 01-11-2018 IPR018391 Pyrrolo-quinoline quinone beta-propeller repeat CDA09_04435 0a41459da2f37eb2f3c7e4b3d8f76d46 380 SMART SM00564 275 306 45.0 T 01-11-2018 IPR018391 Pyrrolo-quinoline quinone beta-propeller repeat CDA09_04435 0a41459da2f37eb2f3c7e4b3d8f76d46 380 SMART SM00564 316 347 0.71 T 01-11-2018 IPR018391 Pyrrolo-quinoline quinone beta-propeller repeat CDA09_04435 0a41459da2f37eb2f3c7e4b3d8f76d46 380 SMART SM00564 100 132 0.0033 T 01-11-2018 IPR018391 Pyrrolo-quinoline quinone beta-propeller repeat CDA09_04435 0a41459da2f37eb2f3c7e4b3d8f76d46 380 SMART SM00564 141 172 0.87 T 01-11-2018 IPR018391 Pyrrolo-quinoline quinone beta-propeller repeat CDA09_04435 0a41459da2f37eb2f3c7e4b3d8f76d46 380 Pfam PF13360 PQQ-like domain 76 305 7.8E-55 T 01-11-2018 IPR002372 Pyrrolo-quinoline quinone repeat CDA09_03475 1098c9f64747072acde786555c967a5c 103 Gene3D G3DSA:2.60.40.10 1 103 9.3E-33 T 01-11-2018 IPR013783 Immunoglobulin-like fold CDA09_03475 1098c9f64747072acde786555c967a5c 103 SUPERFAMILY SSF81296 3 102 1.19E-28 T 01-11-2018 IPR014756 Immunoglobulin E-set CDA09_03475 1098c9f64747072acde786555c967a5c 103 Pfam PF08770 Sulphur oxidation protein SoxZ 7 99 6.5E-33 T 01-11-2018 IPR014880 Sulphur oxidation protein SoxZ CDA09_03475 1098c9f64747072acde786555c967a5c 103 TIGRFAM TIGR04490 SoxZ_true: thiosulfate oxidation carrier complex protein SoxZ 6 101 4.8E-35 T 01-11-2018 IPR030995 Thiosulfate oxidation carrier complex protein SoxZ CDA09_06990 81bec38a201d0502a92ff18342375c82 212 Pfam PF04250 Protein of unknown function (DUF429) 11 202 2.6E-28 T 01-11-2018 IPR007362 Protein of unknown function DUF429 CDA09_15750 acb04df72941ff0f1c1b577b08608219 422 TIGRFAM TIGR00382 clpX: ATP-dependent Clp protease, ATP-binding subunit ClpX 9 411 2.6E-203 T 01-11-2018 IPR004487 Clp protease, ATP-binding subunit ClpX GO:0005524|GO:0006457|GO:0051082 CDA09_15750 acb04df72941ff0f1c1b577b08608219 422 SMART SM00994 11 50 4.1E-24 T 01-11-2018 IPR010603 Zinc finger, ClpX C4-type GO:0008270|GO:0046983 CDA09_15750 acb04df72941ff0f1c1b577b08608219 422 SMART SM00382 112 332 3.5E-13 T 01-11-2018 IPR003593 AAA+ ATPase domain CDA09_15750 acb04df72941ff0f1c1b577b08608219 422 Gene3D G3DSA:3.30.50.30 2 51 8.4E-25 T 01-11-2018 IPR038366 Zinc finger, ClpX C4-type superfamily CDA09_15750 acb04df72941ff0f1c1b577b08608219 422 SMART SM01086 316 411 2.1E-32 T 01-11-2018 IPR019489 Clp ATPase, C-terminal CDA09_15750 acb04df72941ff0f1c1b577b08608219 422 Pfam PF10431 C-terminal, D2-small domain, of ClpB protein 316 389 5.7E-14 T 01-11-2018 IPR019489 Clp ATPase, C-terminal CDA09_15750 acb04df72941ff0f1c1b577b08608219 422 Pfam PF06689 ClpX C4-type zinc finger 12 48 3.7E-20 T 01-11-2018 IPR010603 Zinc finger, ClpX C4-type GO:0008270|GO:0046983 CDA09_15750 acb04df72941ff0f1c1b577b08608219 422 Gene3D G3DSA:1.10.8.60 315 421 3.1E-38 T 01-11-2018 CDA09_15750 acb04df72941ff0f1c1b577b08608219 422 SUPERFAMILY SSF52540 62 404 3.25E-76 T 01-11-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CDA09_15750 acb04df72941ff0f1c1b577b08608219 422 SUPERFAMILY SSF57716 12 47 8.98E-12 T 01-11-2018 CDA09_15750 acb04df72941ff0f1c1b577b08608219 422 Hamap MF_00175 ATP-dependent Clp protease ATP-binding subunit ClpX [clpX]. 2 414 53.304 T 01-11-2018 IPR004487 Clp protease, ATP-binding subunit ClpX GO:0005524|GO:0006457|GO:0051082 CDA09_15750 acb04df72941ff0f1c1b577b08608219 422 Pfam PF07724 AAA domain (Cdc48 subfamily) 113 309 1.4E-50 T 01-11-2018 IPR003959 ATPase, AAA-type, core GO:0005524 CDA09_15750 acb04df72941ff0f1c1b577b08608219 422 Gene3D G3DSA:3.40.50.300 58 314 5.3E-109 T 01-11-2018 CDA09_02120 273e19c22039f0ee8703e4d0d7171154 131 Gene3D G3DSA:3.10.180.10 1 128 8.8E-32 T 01-11-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase CDA09_02120 273e19c22039f0ee8703e4d0d7171154 131 Pfam PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily 4 123 1.2E-12 T 01-11-2018 IPR004360 Glyoxalase/fosfomycin resistance/dioxygenase domain CDA09_02120 273e19c22039f0ee8703e4d0d7171154 131 SUPERFAMILY SSF54593 3 130 1.34E-29 T 01-11-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase CDA09_09405 77a9027aec29b8378ba9f9429b9ec755 392 SUPERFAMILY SSF53901 265 378 2.12E-10 T 01-11-2018 IPR016039 Thiolase-like GO:0003824 CDA09_09405 77a9027aec29b8378ba9f9429b9ec755 392 SUPERFAMILY SSF53901 7 236 1.75E-25 T 01-11-2018 IPR016039 Thiolase-like GO:0003824 CDA09_09405 77a9027aec29b8378ba9f9429b9ec755 392 Gene3D G3DSA:3.40.47.10 3 390 1.7E-92 T 01-11-2018 IPR016039 Thiolase-like GO:0003824 CDA09_09405 77a9027aec29b8378ba9f9429b9ec755 392 PIRSF PIRSF000429 6 344 6.3E-13 T 01-11-2018 IPR002155 Thiolase GO:0016747 CDA09_02100 e48e5e9663cb29dbcecad41f4c29e2ce 330 SUPERFAMILY SSF51735 155 250 1.31E-5 T 01-11-2018 IPR036291 NAD(P)-binding domain superfamily CDA09_02100 e48e5e9663cb29dbcecad41f4c29e2ce 330 Pfam PF13478 XdhC Rossmann domain 163 304 1.2E-34 T 01-11-2018 IPR027051 XdhC Rossmann domain CDA09_02100 e48e5e9663cb29dbcecad41f4c29e2ce 330 Pfam PF02625 XdhC and CoxI family 15 81 2.4E-21 T 01-11-2018 IPR003777 XdhC- CoxI CDA09_02100 e48e5e9663cb29dbcecad41f4c29e2ce 330 Gene3D G3DSA:3.40.50.720 162 310 4.4E-40 T 01-11-2018 CDA09_05315 8034ef83687814e053fd44ed050398fd 171 Pfam PF03477 ATP cone domain 50 136 2.0E-17 T 01-11-2018 IPR005144 ATP-cone domain Reactome: R-HSA-499943 CDA09_05315 8034ef83687814e053fd44ed050398fd 171 TIGRFAM TIGR00244 TIGR00244: transcriptional regulator NrdR 1 146 5.8E-57 T 01-11-2018 IPR003796 Ribonucleotide reductase regulator NrdR-like GO:0008270|GO:0045892 CDA09_05315 8034ef83687814e053fd44ed050398fd 171 Hamap MF_00440 Transcriptional repressor NrdR [nrdR]. 1 153 81.94 T 01-11-2018 IPR003796 Ribonucleotide reductase regulator NrdR-like GO:0008270|GO:0045892 CDA09_03075 1585ff7e65005de5d04b17e2fc773dd5 322 Gene3D G3DSA:1.10.600.10 1 322 1.7E-110 T 01-11-2018 IPR008949 Isoprenoid synthase domain superfamily CDA09_03075 1585ff7e65005de5d04b17e2fc773dd5 322 SUPERFAMILY SSF48576 5 321 4.8E-99 T 01-11-2018 IPR008949 Isoprenoid synthase domain superfamily CDA09_03075 1585ff7e65005de5d04b17e2fc773dd5 322 ProSitePatterns PS00444 Polyprenyl synthases signature 2. 203 215 - T 01-11-2018 IPR033749 Polyprenyl synthetase, conserved site CDA09_03075 1585ff7e65005de5d04b17e2fc773dd5 322 Pfam PF00348 Polyprenyl synthetase 31 260 4.1E-75 T 01-11-2018 IPR000092 Polyprenyl synthetase GO:0008299 CDA09_03075 1585ff7e65005de5d04b17e2fc773dd5 322 ProSitePatterns PS00723 Polyprenyl synthases signature 1. 81 95 - T 01-11-2018 IPR033749 Polyprenyl synthetase, conserved site CDA09_15730 ad196704c95549a4b0317d8816f99662 217 Gene3D G3DSA:2.60.120.590 16 216 3.2E-61 T 01-11-2018 IPR037151 Alpha-ketoglutarate-dependent dioxygenase AlkB-like superfamily CDA09_15730 ad196704c95549a4b0317d8816f99662 217 Pfam PF13532 2OG-Fe(II) oxygenase superfamily 22 214 3.4E-57 T 01-11-2018 IPR027450 Alpha-ketoglutarate-dependent dioxygenase AlkB-like CDA09_15730 ad196704c95549a4b0317d8816f99662 217 SUPERFAMILY SSF51197 19 215 2.61E-62 T 01-11-2018 CDA09_20835 d1d08e535b5eae935dc12e12aa360247 149 Pfam PF02631 RecX family 32 143 3.2E-29 T 01-11-2018 IPR003783 Regulatory protein RecX GO:0006282 CDA09_20835 d1d08e535b5eae935dc12e12aa360247 149 Hamap MF_01114 Regulatory protein RecX [recX]. 5 148 13.943 T 01-11-2018 IPR003783 Regulatory protein RecX GO:0006282 CDA09_20835 d1d08e535b5eae935dc12e12aa360247 149 Gene3D G3DSA:1.10.10.10 6 49 1.3E-8 T 01-11-2018 IPR036388 Winged helix-like DNA-binding domain superfamily CDA09_20835 d1d08e535b5eae935dc12e12aa360247 149 Gene3D G3DSA:1.10.10.10 52 93 1.1E-11 T 01-11-2018 IPR036388 Winged helix-like DNA-binding domain superfamily CDA09_20835 d1d08e535b5eae935dc12e12aa360247 149 Gene3D G3DSA:1.10.10.10 97 146 1.3E-12 T 01-11-2018 IPR036388 Winged helix-like DNA-binding domain superfamily CDA09_10060 035145853cb12375feca3b09a8e94344 276 Pfam PF00378 Enoyl-CoA hydratase/isomerase 12 274 1.1E-47 T 01-11-2018 IPR001753 Enoyl-CoA hydratase/isomerase GO:0003824 CDA09_10060 035145853cb12375feca3b09a8e94344 276 SUPERFAMILY SSF52096 3 275 1.05E-74 T 01-11-2018 IPR029045 ClpP/crotonase-like domain superfamily CDA09_10060 035145853cb12375feca3b09a8e94344 276 Gene3D G3DSA:1.10.12.10 218 276 7.6E-14 T 01-11-2018 IPR014748 Enoyl-CoA hydratase, C-terminal CDA09_10060 035145853cb12375feca3b09a8e94344 276 Gene3D G3DSA:3.90.226.10 1 217 1.8E-60 T 01-11-2018 CDA09_09810 7cdae383cd74fb00e64d4813eeea1073 420 Pfam PF02625 XdhC and CoxI family 37 103 1.5E-23 T 01-11-2018 IPR003777 XdhC- CoxI CDA09_09810 7cdae383cd74fb00e64d4813eeea1073 420 Gene3D G3DSA:3.40.50.720 229 390 1.3E-39 T 01-11-2018 CDA09_09810 7cdae383cd74fb00e64d4813eeea1073 420 Pfam PF13478 XdhC Rossmann domain 230 374 8.0E-31 T 01-11-2018 IPR027051 XdhC Rossmann domain CDA09_20200 186d43621203ceb4837cd45431081e81 319 Pfam PF03466 LysR substrate binding domain 89 314 3.5E-28 T 01-11-2018 IPR005119 LysR, substrate-binding CDA09_20200 186d43621203ceb4837cd45431081e81 319 SUPERFAMILY SSF46785 3 86 4.77E-21 T 01-11-2018 IPR036390 Winged helix DNA-binding domain superfamily CDA09_20200 186d43621203ceb4837cd45431081e81 319 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 9 67 8.2E-19 T 01-11-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 CDA09_20200 186d43621203ceb4837cd45431081e81 319 Gene3D G3DSA:3.40.190.10 102 310 3.7E-53 T 01-11-2018 CDA09_20200 186d43621203ceb4837cd45431081e81 319 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 23 34 8.1E-6 T 01-11-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 CDA09_20200 186d43621203ceb4837cd45431081e81 319 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 34 44 8.1E-6 T 01-11-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 CDA09_20200 186d43621203ceb4837cd45431081e81 319 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 44 55 8.1E-6 T 01-11-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 CDA09_20200 186d43621203ceb4837cd45431081e81 319 SUPERFAMILY SSF53850 91 316 2.35E-30 T 01-11-2018 CDA09_20200 186d43621203ceb4837cd45431081e81 319 Gene3D G3DSA:1.10.10.10 7 93 1.2E-21 T 01-11-2018 IPR036388 Winged helix-like DNA-binding domain superfamily CDA09_20200 186d43621203ceb4837cd45431081e81 319 Gene3D G3DSA:3.40.190.10 176 283 3.7E-53 T 01-11-2018 CDA09_15180 81ba3fe2e771a8711b4f89f41f624ac9 191 ProSitePatterns PS00379 CDP-alcohol phosphatidyltransferases signature. 54 76 - T 01-11-2018 IPR000462 CDP-alcohol phosphatidyltransferase GO:0008654|GO:0016020|GO:0016780 CDA09_15180 81ba3fe2e771a8711b4f89f41f624ac9 191 Gene3D G3DSA:1.20.120.1760 4 179 2.9E-14 T 01-11-2018 CDA09_15180 81ba3fe2e771a8711b4f89f41f624ac9 191 Pfam PF01066 CDP-alcohol phosphatidyltransferase 4 76 2.8E-17 T 01-11-2018 IPR000462 CDP-alcohol phosphatidyltransferase GO:0008654|GO:0016020|GO:0016780 CDA09_15180 81ba3fe2e771a8711b4f89f41f624ac9 191 PIRSF PIRSF000847 1 191 6.6E-47 T 01-11-2018 IPR004570 CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase GO:0008444|GO:0008654|GO:0016021 KEGG: 00564+2.7.8.5|MetaCyc: PWY-5269|MetaCyc: PWY-5668|MetaCyc: PWY-7817 CDA09_15180 81ba3fe2e771a8711b4f89f41f624ac9 191 TIGRFAM TIGR00560 pgsA: CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase 4 184 3.1E-53 T 01-11-2018 IPR004570 CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase GO:0008444|GO:0008654|GO:0016021 KEGG: 00564+2.7.8.5|MetaCyc: PWY-5269|MetaCyc: PWY-5668|MetaCyc: PWY-7817 CDA09_22470 5f6ad0f1e9e4b8066ecd7908e8ba1cd3 299 Pfam PF03466 LysR substrate binding domain 87 289 3.1E-31 T 01-11-2018 IPR005119 LysR, substrate-binding CDA09_22470 5f6ad0f1e9e4b8066ecd7908e8ba1cd3 299 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 7 62 8.8E-16 T 01-11-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 CDA09_22470 5f6ad0f1e9e4b8066ecd7908e8ba1cd3 299 SUPERFAMILY SSF53850 87 295 5.89E-31 T 01-11-2018 CDA09_22470 5f6ad0f1e9e4b8066ecd7908e8ba1cd3 299 Gene3D G3DSA:3.40.190.290 90 298 4.7E-36 T 01-11-2018 CDA09_22470 5f6ad0f1e9e4b8066ecd7908e8ba1cd3 299 Gene3D G3DSA:1.10.10.10 2 82 5.0E-21 T 01-11-2018 IPR036388 Winged helix-like DNA-binding domain superfamily CDA09_22470 5f6ad0f1e9e4b8066ecd7908e8ba1cd3 299 SUPERFAMILY SSF46785 4 103 6.65E-17 T 01-11-2018 IPR036390 Winged helix DNA-binding domain superfamily CDA09_16415 80884f413a7e01ba436b3dbf33423256 289 Pfam PF01039 Carboxyl transferase domain 108 241 5.0E-15 T 01-11-2018 IPR034733 Acetyl-CoA carboxylase MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6722|Reactome: R-HSA-196780 CDA09_16415 80884f413a7e01ba436b3dbf33423256 289 Hamap MF_01395 Acetyl-coenzyme A carboxylase carboxyl transferase subunit beta, chloroplastic [accD]. 1 283 38.28 T 01-11-2018 IPR000438 Acetyl-CoA carboxylase carboxyl transferase, beta subunit GO:0003989|GO:0006633|GO:0009317 MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6722 CDA09_16415 80884f413a7e01ba436b3dbf33423256 289 PRINTS PR01070 Acetyl-CoA carboxylase carboxyl transferase beta subunit signature 131 145 3.6E-39 T 01-11-2018 IPR000438 Acetyl-CoA carboxylase carboxyl transferase, beta subunit GO:0003989|GO:0006633|GO:0009317 MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6722 CDA09_16415 80884f413a7e01ba436b3dbf33423256 289 PRINTS PR01070 Acetyl-CoA carboxylase carboxyl transferase beta subunit signature 202 219 3.6E-39 T 01-11-2018 IPR000438 Acetyl-CoA carboxylase carboxyl transferase, beta subunit GO:0003989|GO:0006633|GO:0009317 MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6722 CDA09_16415 80884f413a7e01ba436b3dbf33423256 289 PRINTS PR01070 Acetyl-CoA carboxylase carboxyl transferase beta subunit signature 231 242 3.6E-39 T 01-11-2018 IPR000438 Acetyl-CoA carboxylase carboxyl transferase, beta subunit GO:0003989|GO:0006633|GO:0009317 MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6722 CDA09_16415 80884f413a7e01ba436b3dbf33423256 289 PRINTS PR01070 Acetyl-CoA carboxylase carboxyl transferase beta subunit signature 253 262 3.6E-39 T 01-11-2018 IPR000438 Acetyl-CoA carboxylase carboxyl transferase, beta subunit GO:0003989|GO:0006633|GO:0009317 MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6722 CDA09_16415 80884f413a7e01ba436b3dbf33423256 289 PRINTS PR01070 Acetyl-CoA carboxylase carboxyl transferase beta subunit signature 165 183 3.6E-39 T 01-11-2018 IPR000438 Acetyl-CoA carboxylase carboxyl transferase, beta subunit GO:0003989|GO:0006633|GO:0009317 MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6722 CDA09_16415 80884f413a7e01ba436b3dbf33423256 289 Gene3D G3DSA:3.90.226.10 27 286 7.7E-85 T 01-11-2018 CDA09_16415 80884f413a7e01ba436b3dbf33423256 289 SUPERFAMILY SSF52096 27 285 6.84E-83 T 01-11-2018 IPR029045 ClpP/crotonase-like domain superfamily CDA09_16415 80884f413a7e01ba436b3dbf33423256 289 TIGRFAM TIGR00515 accD: acetyl-CoA carboxylase, carboxyl transferase, beta subunit 1 286 1.0E-123 T 01-11-2018 IPR000438 Acetyl-CoA carboxylase carboxyl transferase, beta subunit GO:0003989|GO:0006633|GO:0009317 MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6722 CDA09_07465 2707fc9ca2a080c11740bf621a05190f 209 TIGRFAM TIGR00481 TIGR00481: Raf kinase inhibitor-like protein, YbhB/YbcL family 31 198 5.6E-21 T 01-11-2018 IPR005247 YbhB/YbcL CDA09_07465 2707fc9ca2a080c11740bf621a05190f 209 Gene3D G3DSA:3.90.280.10 3 204 1.4E-45 T 01-11-2018 IPR036610 PEBP-like superfamily CDA09_07465 2707fc9ca2a080c11740bf621a05190f 209 Pfam PF01161 Phosphatidylethanolamine-binding protein 28 200 9.3E-36 T 01-11-2018 IPR008914 Phosphatidylethanolamine-binding protein CDA09_07465 2707fc9ca2a080c11740bf621a05190f 209 SUPERFAMILY SSF49777 4 203 6.8E-40 T 01-11-2018 IPR036610 PEBP-like superfamily CDA09_06980 9e41ca7d63feedc855608bad53860dc3 211 Pfam PF00665 Integrase core domain 9 116 4.7E-16 T 01-11-2018 IPR001584 Integrase, catalytic core GO:0015074 CDA09_06980 9e41ca7d63feedc855608bad53860dc3 211 SUPERFAMILY SSF53098 5 126 3.64E-20 T 01-11-2018 IPR012337 Ribonuclease H-like superfamily CDA09_06980 9e41ca7d63feedc855608bad53860dc3 211 Gene3D G3DSA:3.30.420.10 1 145 8.8E-25 T 01-11-2018 IPR036397 Ribonuclease H superfamily GO:0003676 CDA09_22120 3818a30c2d4d988c288179d1378a6286 201 Pfam PF11679 Protein of unknown function (DUF3275) 2 197 1.1E-88 T 01-11-2018 IPR021693 Protein of unknown function DUF3275 CDA09_07300 2a8d683cccf532416425210accb9e913 72 Pfam PF10006 Uncharacterized conserved protein (DUF2249) 6 69 9.8E-18 T 01-11-2018 IPR018720 Domain of unknown function DUF2249 CDA09_07300 2a8d683cccf532416425210accb9e913 72 SUPERFAMILY SSF64307 4 69 6.93E-10 T 01-11-2018 IPR036868 TusA-like domain superfamily CDA09_04840 2fa6c109afc4ff9bb5dd16bdbee6407e 76 Pfam PF13986 Domain of unknown function (DUF4224) 5 48 1.0E-17 T 01-11-2018 IPR025319 Domain of unknown function DUF4224 CDA09_14335 d0f76eeadf5e351d1e660878475dfa5e 288 Gene3D G3DSA:1.10.150.650 98 170 1.1E-81 T 01-11-2018 CDA09_14335 d0f76eeadf5e351d1e660878475dfa5e 288 Pfam PF02811 PHP domain 6 106 1.3E-6 T 01-11-2018 IPR004013 PHP domain GO:0003824 CDA09_14335 d0f76eeadf5e351d1e660878475dfa5e 288 SMART SM00481 5 70 3.2E-16 T 01-11-2018 IPR003141 Polymerase/histidinol phosphatase, N-terminal CDA09_14335 d0f76eeadf5e351d1e660878475dfa5e 288 Gene3D G3DSA:3.20.20.140 6 251 1.1E-81 T 01-11-2018 CDA09_14335 d0f76eeadf5e351d1e660878475dfa5e 288 SUPERFAMILY SSF89550 2 256 1.49E-46 T 01-11-2018 IPR016195 Polymerase/histidinol phosphatase-like GO:0003824 Reactome: R-HSA-6784531|Reactome: R-HSA-6791226 CDA09_08360 87dade289f4ba204575040800a1d7e1e 113 Pfam PF04319 NifZ domain 15 85 2.9E-28 T 01-11-2018 IPR007415 Nitrogenase MoFe maturation protein, NifZ GO:0009399 CDA09_20295 2c92d9a490e075eeb215f7d2c5aae84f 470 Gene3D G3DSA:3.40.718.10 168 463 2.0E-93 T 01-11-2018 CDA09_20295 2c92d9a490e075eeb215f7d2c5aae84f 470 Pfam PF01575 MaoC like domain 26 119 1.6E-17 T 01-11-2018 IPR002539 MaoC-like dehydratase domain CDA09_20295 2c92d9a490e075eeb215f7d2c5aae84f 470 SUPERFAMILY SSF53659 177 463 1.07E-66 T 01-11-2018 CDA09_20295 2c92d9a490e075eeb215f7d2c5aae84f 470 Gene3D G3DSA:3.10.129.10 8 162 7.8E-38 T 01-11-2018 CDA09_20295 2c92d9a490e075eeb215f7d2c5aae84f 470 SUPERFAMILY SSF54637 11 148 1.95E-32 T 01-11-2018 IPR029069 HotDog domain superfamily CDA09_20295 2c92d9a490e075eeb215f7d2c5aae84f 470 Pfam PF01515 Phosphate acetyl/butaryl transferase 244 457 3.7E-43 T 01-11-2018 IPR002505 Phosphate acetyl/butaryl transferase GO:0016746 KEGG: 00430+2.3.1.8|KEGG: 00620+2.3.1.8|KEGG: 00640+2.3.1.8|KEGG: 00680+2.3.1.8|KEGG: 00720+2.3.1.8|MetaCyc: PWY-1281|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497|MetaCyc: PWY-6637 CDA09_17595 10cf4f55bcd8b4b53a1fea93677e10c2 233 Pfam PF13489 Methyltransferase domain 48 200 3.3E-28 T 01-11-2018 CDA09_17595 10cf4f55bcd8b4b53a1fea93677e10c2 233 Gene3D G3DSA:3.40.50.150 9 231 4.4E-78 T 01-11-2018 CDA09_17595 10cf4f55bcd8b4b53a1fea93677e10c2 233 SUPERFAMILY SSF53335 12 227 4.26E-52 T 01-11-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase CDA09_17595 10cf4f55bcd8b4b53a1fea93677e10c2 233 Hamap MF_00472 Ubiquinone biosynthesis O-methyltransferase [ubiG]. 9 232 38.076 T 01-11-2018 IPR010233 Ubiquinone biosynthesis O-methyltransferase GO:0006744|GO:0008425 KEGG: 00130+2.1.1.222+2.1.1.64|MetaCyc: PWY-5855|MetaCyc: PWY-5856|MetaCyc: PWY-5857|MetaCyc: PWY-5870|MetaCyc: PWY-5871|MetaCyc: PWY-5872|MetaCyc: PWY-5873|MetaCyc: PWY-6708|MetaCyc: PWY-7230|MetaCyc: PWY-7233|Reactome: R-HSA-2142789 CDA09_17595 10cf4f55bcd8b4b53a1fea93677e10c2 233 TIGRFAM TIGR01983 UbiG: 3-demethylubiquinone-9 3-O-methyltransferase 9 226 7.5E-86 T 01-11-2018 IPR010233 Ubiquinone biosynthesis O-methyltransferase GO:0006744|GO:0008425 KEGG: 00130+2.1.1.222+2.1.1.64|MetaCyc: PWY-5855|MetaCyc: PWY-5856|MetaCyc: PWY-5857|MetaCyc: PWY-5870|MetaCyc: PWY-5871|MetaCyc: PWY-5872|MetaCyc: PWY-5873|MetaCyc: PWY-6708|MetaCyc: PWY-7230|MetaCyc: PWY-7233|Reactome: R-HSA-2142789 CDA09_14695 536965a9a5f177754b623dec972d6a3c 134 SUPERFAMILY SSF52172 4 123 3.98E-39 T 01-11-2018 IPR011006 CheY-like superfamily CDA09_14695 536965a9a5f177754b623dec972d6a3c 134 SMART SM00448 3 117 6.1E-38 T 01-11-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 CDA09_14695 536965a9a5f177754b623dec972d6a3c 134 Gene3D G3DSA:3.40.50.12740 1 133 3.1E-46 T 01-11-2018 CDA09_14695 536965a9a5f177754b623dec972d6a3c 134 Pfam PF00072 Response regulator receiver domain 5 117 8.6E-26 T 01-11-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 CDA09_09130 ce77b2ee255c33f9147f625ff8a3030f 243 SUPERFAMILY SSF48498 112 215 4.34E-9 T 01-11-2018 IPR036271 Tetracyclin repressor-like, C-terminal domain superfamily CDA09_09130 ce77b2ee255c33f9147f625ff8a3030f 243 Gene3D G3DSA:1.10.357.10 29 231 7.2E-35 T 01-11-2018 CDA09_09130 ce77b2ee255c33f9147f625ff8a3030f 243 Pfam PF00440 Bacterial regulatory proteins, tetR family 50 94 3.4E-6 T 01-11-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 CDA09_09130 ce77b2ee255c33f9147f625ff8a3030f 243 SUPERFAMILY SSF46689 38 102 6.67E-12 T 01-11-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 CDA09_20095 4127ea9d22e30c9eda322f9c6a548524 268 SUPERFAMILY SSF53790 3 260 1.57E-61 T 01-11-2018 IPR035996 Tetrapyrrole methylase superfamily GO:0008168 Reactome: R-HSA-5358493 CDA09_20095 4127ea9d22e30c9eda322f9c6a548524 268 Gene3D G3DSA:3.40.1010.10 5 117 9.5E-26 T 01-11-2018 IPR014777 Tetrapyrrole methylase, subdomain 1 GO:0008168 Reactome: R-HSA-5358493 CDA09_20095 4127ea9d22e30c9eda322f9c6a548524 268 TIGRFAM TIGR01465 cobM_cbiF: precorrin-4 C11-methyltransferase 10 260 2.0E-95 T 01-11-2018 IPR006362 Cobalamin (vitamin B12) biosynthesis CobM/CbiF, precorrin-4 C11-methyltransferase GO:0009236|GO:0046026 CDA09_20095 4127ea9d22e30c9eda322f9c6a548524 268 Gene3D G3DSA:3.30.950.10 118 238 5.9E-43 T 01-11-2018 IPR014776 Tetrapyrrole methylase, subdomain 2 GO:0008168 Reactome: R-HSA-5358493 CDA09_20095 4127ea9d22e30c9eda322f9c6a548524 268 Pfam PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases 10 216 2.4E-40 T 01-11-2018 IPR000878 Tetrapyrrole methylase GO:0008168 Reactome: R-HSA-5358493 CDA09_20095 4127ea9d22e30c9eda322f9c6a548524 268 ProSitePatterns PS00840 Uroporphyrin-III C-methyltransferase signature 2. 83 116 - T 01-11-2018 IPR003043 Uroporphiryn-III C-methyltransferase, conserved site GO:0008168|GO:0055114 KEGG: 00860+4.99.1.4+1.3.1.76+2.1.1.107|MetaCyc: PWY-5194|MetaCyc: PWY-5196|MetaCyc: PWY-7377 CDA09_20095 4127ea9d22e30c9eda322f9c6a548524 268 ProSitePatterns PS00839 Uroporphyrin-III C-methyltransferase signature 1. 13 27 - T 01-11-2018 IPR003043 Uroporphiryn-III C-methyltransferase, conserved site GO:0008168|GO:0055114 KEGG: 00860+4.99.1.4+1.3.1.76+2.1.1.107|MetaCyc: PWY-5194|MetaCyc: PWY-5196|MetaCyc: PWY-7377 CDA09_04395 25ef5725ceea6ae980fa52953d7372dc 335 Pfam PF01384 Phosphate transporter family 25 324 3.9E-91 T 01-11-2018 IPR001204 Phosphate transporter GO:0005315|GO:0006817|GO:0016020 Reactome: R-HSA-427652 CDA09_04130 b499d3932c7869d47496175a6f0fcfcc 384 SUPERFAMILY SSF52151 9 361 1.43E-53 T 01-11-2018 IPR016035 Acyl transferase/acyl hydrolase/lysophospholipase CDA09_04130 b499d3932c7869d47496175a6f0fcfcc 384 Gene3D G3DSA:3.40.1090.10 135 290 5.2E-17 T 01-11-2018 CDA09_04130 b499d3932c7869d47496175a6f0fcfcc 384 Gene3D G3DSA:3.40.1090.10 2 94 3.7E-16 T 01-11-2018 CDA09_04130 b499d3932c7869d47496175a6f0fcfcc 384 Pfam PF12536 Patatin phospholipase 267 372 1.7E-38 T 01-11-2018 IPR021095 Protein of unknown function DUF3734 CDA09_04130 b499d3932c7869d47496175a6f0fcfcc 384 Pfam PF01734 Patatin-like phospholipase 13 228 3.7E-23 T 01-11-2018 IPR002641 Patatin-like phospholipase domain GO:0006629 CDA09_00960 b4ef83b8b36ebbb64143ed99b1ce68f5 317 Gene3D G3DSA:2.120.10.30 61 310 7.7E-8 T 01-11-2018 IPR011042 Six-bladed beta-propeller, TolB-like CDA09_00960 b4ef83b8b36ebbb64143ed99b1ce68f5 317 SUPERFAMILY SSF50956 64 316 4.84E-27 T 01-11-2018 CDA09_00960 b4ef83b8b36ebbb64143ed99b1ce68f5 317 Pfam PF06977 SdiA-regulated 67 315 9.2E-68 T 01-11-2018 IPR009722 SdiA-regulated CDA09_11370 18913f0cf6012f101cdec2a15566ed03 400 Gene3D G3DSA:2.40.50.100 92 243 2.4E-70 T 01-11-2018 CDA09_11370 18913f0cf6012f101cdec2a15566ed03 400 Gene3D G3DSA:2.40.30.170 78 324 2.4E-70 T 01-11-2018 CDA09_11370 18913f0cf6012f101cdec2a15566ed03 400 SUPERFAMILY SSF111369 91 323 8.89E-22 T 01-11-2018 CDA09_11370 18913f0cf6012f101cdec2a15566ed03 400 Gene3D G3DSA:1.10.287.470 126 202 2.4E-70 T 01-11-2018 CDA09_11370 18913f0cf6012f101cdec2a15566ed03 400 Pfam PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion 80 317 3.0E-51 T 01-11-2018 IPR032317 RND efflux pump, membrane fusion protein, barrel-sandwich domain CDA09_11370 18913f0cf6012f101cdec2a15566ed03 400 TIGRFAM TIGR01730 RND_mfp: efflux transporter, RND family, MFP subunit 65 392 8.6E-42 T 01-11-2018 IPR006143 RND efflux pump, membrane fusion protein GO:0005215|GO:0016020|GO:0055085 CDA09_11370 18913f0cf6012f101cdec2a15566ed03 400 Pfam PF00529 HlyD membrane-fusion protein of T1SS 61 79 2.2E-7 T 01-11-2018 IPR006143 RND efflux pump, membrane fusion protein GO:0005215|GO:0016020|GO:0055085 CDA09_11370 18913f0cf6012f101cdec2a15566ed03 400 Gene3D G3DSA:2.40.420.20 66 383 2.4E-70 T 01-11-2018 CDA09_03025 c0c6e6b5524e2df80245e947fc29db03 374 Gene3D G3DSA:3.40.50.720 139 317 1.9E-128 T 01-11-2018 CDA09_03025 c0c6e6b5524e2df80245e947fc29db03 374 SMART SM01002 148 310 2.0E-80 T 01-11-2018 IPR007698 Alanine dehydrogenase/pyridine nucleotide transhydrogenase, NAD(H)-binding domain CDA09_03025 c0c6e6b5524e2df80245e947fc29db03 374 Pfam PF05222 Alanine dehydrogenase/PNT, N-terminal domain 6 139 7.0E-34 T 01-11-2018 IPR007886 Alanine dehydrogenase/pyridine nucleotide transhydrogenase, N-terminal CDA09_03025 c0c6e6b5524e2df80245e947fc29db03 374 Gene3D G3DSA:3.40.50.720 5 362 1.9E-128 T 01-11-2018 CDA09_03025 c0c6e6b5524e2df80245e947fc29db03 374 SUPERFAMILY SSF52283 4 170 2.64E-40 T 01-11-2018 CDA09_03025 c0c6e6b5524e2df80245e947fc29db03 374 ProSitePatterns PS00837 Alanine dehydrogenase & pyridine nucleotide transhydrogenase signature 2. 172 197 - T 01-11-2018 IPR008143 Alanine dehydrogenase/pyridine nucleotide transhydrogenase, conserved site-2 GO:0016491|GO:0055114 KEGG: 00250+1.4.1.1|KEGG: 00430+1.4.1.1|Reactome: R-HSA-71403 CDA09_03025 c0c6e6b5524e2df80245e947fc29db03 374 Pfam PF01262 Alanine dehydrogenase/PNT, C-terminal domain 144 365 4.2E-70 T 01-11-2018 IPR007698 Alanine dehydrogenase/pyridine nucleotide transhydrogenase, NAD(H)-binding domain CDA09_03025 c0c6e6b5524e2df80245e947fc29db03 374 SMART SM01003 6 139 1.1E-50 T 01-11-2018 IPR007886 Alanine dehydrogenase/pyridine nucleotide transhydrogenase, N-terminal CDA09_03025 c0c6e6b5524e2df80245e947fc29db03 374 SUPERFAMILY SSF51735 159 332 2.04E-36 T 01-11-2018 IPR036291 NAD(P)-binding domain superfamily CDA09_19365 28cd798e3118f1f662b88d84f2dcf7d1 717 SUPERFAMILY SSF53067 12 357 4.95E-6 T 01-11-2018 CDA09_19365 28cd798e3118f1f662b88d84f2dcf7d1 717 Pfam PF01968 Hydantoinase/oxoprolinase 226 511 3.8E-77 T 01-11-2018 IPR002821 Hydantoinase A/oxoprolinase GO:0016787 Reactome: R-HSA-174403|Reactome: R-HSA-5578998 CDA09_19365 28cd798e3118f1f662b88d84f2dcf7d1 717 Pfam PF05378 Hydantoinase/oxoprolinase N-terminal region 13 201 5.8E-39 T 01-11-2018 IPR008040 Hydantoinaseoxoprolinase, N-terminal Reactome: R-HSA-174403|Reactome: R-HSA-5578998 CDA09_14345 93accbf83d9c66e7ba68ea6b430d1aec 128 ProSitePatterns PS00189 2-oxo acid dehydrogenases acyltransferase component lipoyl binding site. 49 78 - T 01-11-2018 IPR003016 2-oxo acid dehydrogenase, lipoyl-binding site Reactome: R-HSA-389661 CDA09_14345 93accbf83d9c66e7ba68ea6b430d1aec 128 Gene3D G3DSA:2.40.50.100 2 127 6.0E-47 T 01-11-2018 CDA09_14345 93accbf83d9c66e7ba68ea6b430d1aec 128 Pfam PF01597 Glycine cleavage H-protein 8 125 1.1E-40 T 01-11-2018 IPR033753 Glycine cleavage system H-protein/Simiate CDA09_14345 93accbf83d9c66e7ba68ea6b430d1aec 128 SUPERFAMILY SSF51230 3 126 1.96E-39 T 01-11-2018 IPR011053 Single hybrid motif CDA09_14345 93accbf83d9c66e7ba68ea6b430d1aec 128 Hamap MF_00272 Glycine cleavage system H protein [gcvH]. 5 126 38.941 T 01-11-2018 IPR002930 Glycine cleavage system H-protein GO:0005960|GO:0019464 Reactome: R-HSA-389661|Reactome: R-HSA-6783984 CDA09_14345 93accbf83d9c66e7ba68ea6b430d1aec 128 TIGRFAM TIGR00527 gcvH: glycine cleavage system H protein 3 126 4.5E-45 T 01-11-2018 IPR017453 Glycine cleavage system H-protein, subgroup GO:0005960|GO:0019464 Reactome: R-HSA-389661|Reactome: R-HSA-6783984 CDA09_02305 78f7d0345e7f2225074894402f4e8710 129 Pfam PF07009 NusG domain II 24 119 1.3E-17 T 01-11-2018 IPR024045 NusG, domain 2 CDA09_02305 78f7d0345e7f2225074894402f4e8710 129 Gene3D G3DSA:2.60.320.10 37 129 2.7E-18 T 01-11-2018 IPR038690 NusG, domain 2 superfamily CDA09_09135 550f2159c29ebf9d2a5b015ee34129cc 418 PRINTS PR00385 P450 superfamily signature 253 270 9.9E-8 T 01-11-2018 IPR001128 Cytochrome P450 GO:0005506|GO:0016705|GO:0020037|GO:0055114 CDA09_09135 550f2159c29ebf9d2a5b015ee34129cc 418 PRINTS PR00385 P450 superfamily signature 288 299 9.9E-8 T 01-11-2018 IPR001128 Cytochrome P450 GO:0005506|GO:0016705|GO:0020037|GO:0055114 CDA09_09135 550f2159c29ebf9d2a5b015ee34129cc 418 PRINTS PR00385 P450 superfamily signature 354 363 9.9E-8 T 01-11-2018 IPR001128 Cytochrome P450 GO:0005506|GO:0016705|GO:0020037|GO:0055114 CDA09_09135 550f2159c29ebf9d2a5b015ee34129cc 418 PRINTS PR00385 P450 superfamily signature 363 374 9.9E-8 T 01-11-2018 IPR001128 Cytochrome P450 GO:0005506|GO:0016705|GO:0020037|GO:0055114 CDA09_09135 550f2159c29ebf9d2a5b015ee34129cc 418 SUPERFAMILY SSF48264 21 411 2.75E-92 T 01-11-2018 IPR036396 Cytochrome P450 superfamily GO:0005506|GO:0016705|GO:0020037|GO:0055114 CDA09_09135 550f2159c29ebf9d2a5b015ee34129cc 418 PRINTS PR00359 B-class P450 signature 333 348 1.7E-38 T 01-11-2018 IPR002397 Cytochrome P450, B-class GO:0005506|GO:0020037|GO:0055114 CDA09_09135 550f2159c29ebf9d2a5b015ee34129cc 418 PRINTS PR00359 B-class P450 signature 162 177 1.7E-38 T 01-11-2018 IPR002397 Cytochrome P450, B-class GO:0005506|GO:0020037|GO:0055114 CDA09_09135 550f2159c29ebf9d2a5b015ee34129cc 418 PRINTS PR00359 B-class P450 signature 354 363 1.7E-38 T 01-11-2018 IPR002397 Cytochrome P450, B-class GO:0005506|GO:0020037|GO:0055114 CDA09_09135 550f2159c29ebf9d2a5b015ee34129cc 418 PRINTS PR00359 B-class P450 signature 305 332 1.7E-38 T 01-11-2018 IPR002397 Cytochrome P450, B-class GO:0005506|GO:0020037|GO:0055114 CDA09_09135 550f2159c29ebf9d2a5b015ee34129cc 418 PRINTS PR00359 B-class P450 signature 363 374 1.7E-38 T 01-11-2018 IPR002397 Cytochrome P450, B-class GO:0005506|GO:0020037|GO:0055114 CDA09_09135 550f2159c29ebf9d2a5b015ee34129cc 418 PRINTS PR00359 B-class P450 signature 207 229 1.7E-38 T 01-11-2018 IPR002397 Cytochrome P450, B-class GO:0005506|GO:0020037|GO:0055114 CDA09_09135 550f2159c29ebf9d2a5b015ee34129cc 418 PRINTS PR00359 B-class P450 signature 145 161 1.7E-38 T 01-11-2018 IPR002397 Cytochrome P450, B-class GO:0005506|GO:0020037|GO:0055114 CDA09_09135 550f2159c29ebf9d2a5b015ee34129cc 418 PRINTS PR00359 B-class P450 signature 98 109 1.7E-38 T 01-11-2018 IPR002397 Cytochrome P450, B-class GO:0005506|GO:0020037|GO:0055114 CDA09_09135 550f2159c29ebf9d2a5b015ee34129cc 418 PRINTS PR00359 B-class P450 signature 288 299 1.7E-38 T 01-11-2018 IPR002397 Cytochrome P450, B-class GO:0005506|GO:0020037|GO:0055114 CDA09_09135 550f2159c29ebf9d2a5b015ee34129cc 418 ProSitePatterns PS00086 Cytochrome P450 cysteine heme-iron ligand signature. 356 365 - T 01-11-2018 IPR017972 Cytochrome P450, conserved site GO:0016705|GO:0055114 CDA09_09135 550f2159c29ebf9d2a5b015ee34129cc 418 Pfam PF00067 Cytochrome P450 93 383 5.1E-31 T 01-11-2018 IPR001128 Cytochrome P450 GO:0005506|GO:0016705|GO:0020037|GO:0055114 CDA09_09135 550f2159c29ebf9d2a5b015ee34129cc 418 Gene3D G3DSA:1.10.630.10 2 418 7.7E-124 T 01-11-2018 IPR036396 Cytochrome P450 superfamily GO:0005506|GO:0016705|GO:0020037|GO:0055114 CDA09_06125 a591200da6ae3cad88d259eb9764f70c 455 SUPERFAMILY SSF55874 314 453 7.86E-28 T 01-11-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily CDA09_06125 a591200da6ae3cad88d259eb9764f70c 455 PRINTS PR00344 Bacterial sensor protein C-terminal signature 385 399 3.4E-9 T 01-11-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 CDA09_06125 a591200da6ae3cad88d259eb9764f70c 455 PRINTS PR00344 Bacterial sensor protein C-terminal signature 440 453 3.4E-9 T 01-11-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 CDA09_06125 a591200da6ae3cad88d259eb9764f70c 455 PRINTS PR00344 Bacterial sensor protein C-terminal signature 416 434 3.4E-9 T 01-11-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 CDA09_06125 a591200da6ae3cad88d259eb9764f70c 455 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 350 453 3.2E-13 T 01-11-2018 IPR003594 Histidine kinase/HSP90-like ATPase CDA09_06125 a591200da6ae3cad88d259eb9764f70c 455 SMART SM00387 350 455 6.4E-19 T 01-11-2018 IPR003594 Histidine kinase/HSP90-like ATPase CDA09_06125 a591200da6ae3cad88d259eb9764f70c 455 Gene3D G3DSA:3.30.565.10 312 455 1.7E-27 T 01-11-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily CDA09_18795 e5f9926adec632d4b54cc68b61b04c2a 300 SUPERFAMILY SSF51735 2 286 3.01E-38 T 01-11-2018 IPR036291 NAD(P)-binding domain superfamily CDA09_18795 e5f9926adec632d4b54cc68b61b04c2a 300 Pfam PF13460 NAD(P)H-binding 8 198 4.8E-9 T 01-11-2018 IPR016040 NAD(P)-binding domain CDA09_18795 e5f9926adec632d4b54cc68b61b04c2a 300 Gene3D G3DSA:3.40.50.720 1 291 9.6E-74 T 01-11-2018 CDA09_10200 2611e3d3a2eda6c7f7442ba49a8ffc36 88 Pfam PF06234 Toluene-4-monooxygenase system protein B (TmoB) 3 83 4.4E-34 T 01-11-2018 IPR009355 Toluene-4-monooxygenase system B CDA09_10200 2611e3d3a2eda6c7f7442ba49a8ffc36 88 Gene3D G3DSA:3.10.20.270 3 85 1.0E-33 T 01-11-2018 IPR036713 TmoB-like superfamily CDA09_10200 2611e3d3a2eda6c7f7442ba49a8ffc36 88 SUPERFAMILY SSF110814 3 84 4.05E-34 T 01-11-2018 IPR036713 TmoB-like superfamily CDA09_04405 d67e07cef9b5b88949291ef29e127a78 377 Gene3D G3DSA:1.10.150.530 4 65 1.9E-22 T 01-11-2018 CDA09_04405 d67e07cef9b5b88949291ef29e127a78 377 SUPERFAMILY SSF102114 104 321 7.32E-14 T 01-11-2018 CDA09_04405 d67e07cef9b5b88949291ef29e127a78 377 Gene3D G3DSA:3.20.20.70 66 346 1.0E-107 T 01-11-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 CDA09_04405 d67e07cef9b5b88949291ef29e127a78 377 PIRSF PIRSF006004 3 375 4.3E-155 T 01-11-2018 IPR004383 Ribosomal RNA large subunit methyltransferase RlmN/Cfr GO:0005737|GO:0006364|GO:0008173 CDA09_04405 d67e07cef9b5b88949291ef29e127a78 377 Pfam PF04055 Radical SAM superfamily 108 287 4.7E-17 T 01-11-2018 IPR007197 Radical SAM GO:0003824|GO:0051536 CDA09_04405 d67e07cef9b5b88949291ef29e127a78 377 TIGRFAM TIGR00048 rRNA_mod_RlmN: 23S rRNA (adenine(2503)-C(2))-methyltransferase 5 366 1.6E-132 T 01-11-2018 IPR027492 Dual-specificity RNA methyltransferase RlmN GO:0030488|GO:0070475 CDA09_04405 d67e07cef9b5b88949291ef29e127a78 377 Hamap MF_01849 Dual-specificity RNA methyltransferase RlmN [rlmN]. 4 361 74.821 T 01-11-2018 IPR027492 Dual-specificity RNA methyltransferase RlmN GO:0030488|GO:0070475 CDA09_14680 e87a84c17018e8b3e2d4022652728478 647 Pfam PF04055 Radical SAM superfamily 371 532 2.1E-9 T 01-11-2018 IPR007197 Radical SAM GO:0003824|GO:0051536 CDA09_14680 e87a84c17018e8b3e2d4022652728478 647 Gene3D G3DSA:3.80.30.20 366 546 1.3E-12 T 01-11-2018 IPR023404 Radical SAM, alpha/beta horseshoe CDA09_14680 e87a84c17018e8b3e2d4022652728478 647 SUPERFAMILY SSF102114 345 536 1.06E-24 T 01-11-2018 CDA09_14680 e87a84c17018e8b3e2d4022652728478 647 SMART SM00729 368 581 4.2E-13 T 01-11-2018 IPR006638 Elp3/MiaB/NifB GO:0003824|GO:0051536 CDA09_00480 cc1c921c024d32ad282c60a8f3a1e2c9 178 Hamap MF_01416 ATP synthase subunit delta [atpD]. 3 178 18.983 T 01-11-2018 IPR000711 ATPase, OSCP/delta subunit GO:0015986|GO:0046933 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 CDA09_00480 cc1c921c024d32ad282c60a8f3a1e2c9 178 Pfam PF00213 ATP synthase delta (OSCP) subunit 7 176 1.4E-51 T 01-11-2018 IPR000711 ATPase, OSCP/delta subunit GO:0015986|GO:0046933 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 CDA09_00480 cc1c921c024d32ad282c60a8f3a1e2c9 178 SUPERFAMILY SSF47928 3 107 1.44E-24 T 01-11-2018 IPR026015 F1F0 ATP synthase OSCP/delta subunit, N-terminal domain superfamily Reactome: R-HSA-163210|Reactome: R-HSA-8949613 CDA09_00480 cc1c921c024d32ad282c60a8f3a1e2c9 178 Gene3D G3DSA:1.10.520.20 2 107 6.1E-32 T 01-11-2018 IPR026015 F1F0 ATP synthase OSCP/delta subunit, N-terminal domain superfamily Reactome: R-HSA-163210|Reactome: R-HSA-8949613 CDA09_00480 cc1c921c024d32ad282c60a8f3a1e2c9 178 TIGRFAM TIGR01145 ATP_synt_delta: ATP synthase F1, delta subunit 7 176 1.6E-42 T 01-11-2018 IPR000711 ATPase, OSCP/delta subunit GO:0015986|GO:0046933 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 CDA09_00480 cc1c921c024d32ad282c60a8f3a1e2c9 178 PRINTS PR00125 ATP synthase delta subunit signature 7 26 8.9E-25 T 01-11-2018 IPR000711 ATPase, OSCP/delta subunit GO:0015986|GO:0046933 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 CDA09_00480 cc1c921c024d32ad282c60a8f3a1e2c9 178 PRINTS PR00125 ATP synthase delta subunit signature 86 100 8.9E-25 T 01-11-2018 IPR000711 ATPase, OSCP/delta subunit GO:0015986|GO:0046933 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 CDA09_00480 cc1c921c024d32ad282c60a8f3a1e2c9 178 PRINTS PR00125 ATP synthase delta subunit signature 75 86 8.9E-25 T 01-11-2018 IPR000711 ATPase, OSCP/delta subunit GO:0015986|GO:0046933 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 CDA09_00480 cc1c921c024d32ad282c60a8f3a1e2c9 178 PRINTS PR00125 ATP synthase delta subunit signature 136 151 8.9E-25 T 01-11-2018 IPR000711 ATPase, OSCP/delta subunit GO:0015986|GO:0046933 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 CDA09_00480 cc1c921c024d32ad282c60a8f3a1e2c9 178 PRINTS PR00125 ATP synthase delta subunit signature 151 169 8.9E-25 T 01-11-2018 IPR000711 ATPase, OSCP/delta subunit GO:0015986|GO:0046933 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 CDA09_17960 cc45e3579c647e8bf1dafd0a25ac34aa 262 SUPERFAMILY SSF51366 12 261 3.06E-85 T 01-11-2018 IPR011060 Ribulose-phosphate binding barrel GO:0003824 CDA09_17960 cc45e3579c647e8bf1dafd0a25ac34aa 262 Pfam PF00218 Indole-3-glycerol phosphate synthase 5 260 8.4E-92 T 01-11-2018 IPR013798 Indole-3-glycerol phosphate synthase GO:0004425 KEGG: 00400+4.1.1.48 CDA09_17960 cc45e3579c647e8bf1dafd0a25ac34aa 262 Hamap MF_00134_B Indole-3-glycerol phosphate synthase [trpC]. 3 262 35.492 T 01-11-2018 IPR013798 Indole-3-glycerol phosphate synthase GO:0004425 KEGG: 00400+4.1.1.48 CDA09_17960 cc45e3579c647e8bf1dafd0a25ac34aa 262 ProSitePatterns PS00614 Indole-3-glycerol phosphate synthase signature. 56 74 - T 01-11-2018 IPR001468 Indole-3-glycerol phosphate synthase, conserved site GO:0004425|GO:0006568 KEGG: 00400+4.1.1.48 CDA09_17960 cc45e3579c647e8bf1dafd0a25ac34aa 262 Gene3D G3DSA:3.20.20.70 1 262 2.0E-102 T 01-11-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 CDA09_22660 bd324b7980851ad3357a7b1c55288392 379 Gene3D G3DSA:1.20.1270.370 9 220 5.8E-65 T 01-11-2018 CDA09_22660 bd324b7980851ad3357a7b1c55288392 379 TIGRFAM TIGR03190 benz_CoA_bzdN: benzoyl-CoA reductase, bzd-type, N subunit 3 379 7.8E-259 T 01-11-2018 IPR017603 Benzoyl-CoA reductase, bzd-type, N subunit CDA09_22660 bd324b7980851ad3357a7b1c55288392 379 Pfam PF06050 2-hydroxyglutaryl-CoA dehydratase, D-component 36 373 1.7E-53 T 01-11-2018 IPR010327 FldB/FldC dehydratase alpha/beta subunit CDA09_22660 bd324b7980851ad3357a7b1c55288392 379 Gene3D G3DSA:3.40.50.11900 232 378 1.3E-46 T 01-11-2018 CDA09_22660 bd324b7980851ad3357a7b1c55288392 379 Gene3D G3DSA:3.40.50.11890 29 155 5.8E-65 T 01-11-2018 CDA09_11145 aabce57e683b4c8b7323bc48c4583a26 479 ProSitePatterns PS00216 Sugar transport proteins signature 1. 83 99 - T 01-11-2018 IPR005829 Sugar transporter, conserved site GO:0005215|GO:0016021|GO:0055085 CDA09_11145 aabce57e683b4c8b7323bc48c4583a26 479 Gene3D G3DSA:1.10.286.90 208 240 4.9E-5 T 01-11-2018 CDA09_11145 aabce57e683b4c8b7323bc48c4583a26 479 ProSitePatterns PS00216 Sugar transport proteins signature 1. 320 336 - T 01-11-2018 IPR005829 Sugar transporter, conserved site GO:0005215|GO:0016021|GO:0055085 CDA09_11145 aabce57e683b4c8b7323bc48c4583a26 479 ProSitePatterns PS00217 Sugar transport proteins signature 2. 125 150 - T 01-11-2018 IPR005829 Sugar transporter, conserved site GO:0005215|GO:0016021|GO:0055085 CDA09_11145 aabce57e683b4c8b7323bc48c4583a26 479 Pfam PF00083 Sugar (and other) transporter 57 456 5.4E-52 T 01-11-2018 IPR005828 Major facilitator, sugar transporter-like GO:0016021|GO:0022857|GO:0055085 CDA09_11145 aabce57e683b4c8b7323bc48c4583a26 479 SUPERFAMILY SSF103473 15 456 1.06E-93 T 01-11-2018 IPR036259 MFS transporter superfamily CDA09_02005 f1601097919ec6ddd6f385d18e8c919c 359 Pfam PF04892 VanZ like family 54 128 1.8E-12 T 01-11-2018 IPR006976 VanZ-like CDA09_09170 667c9ada334d9b1fd2f39b7f12eeec86 379 Pfam PF02515 CoA-transferase family III 9 353 1.4E-77 T 01-11-2018 IPR003673 CoA-transferase family III GO:0003824 CDA09_09170 667c9ada334d9b1fd2f39b7f12eeec86 379 Gene3D G3DSA:3.40.50.10540 8 322 1.3E-111 T 01-11-2018 IPR023606 CoA-transferase family III domain superfamily CDA09_09170 667c9ada334d9b1fd2f39b7f12eeec86 379 SUPERFAMILY SSF89796 5 371 1.31E-110 T 01-11-2018 IPR023606 CoA-transferase family III domain superfamily CDA09_09170 667c9ada334d9b1fd2f39b7f12eeec86 379 Gene3D G3DSA:3.30.1540.10 215 304 1.3E-111 T 01-11-2018 CDA09_20555 8db0c2d2d3f242b3874d1c09c28f9008 258 Gene3D G3DSA:3.60.10.10 1 257 9.8E-70 T 01-11-2018 IPR036691 Endonuclease/exonuclease/phosphatase superfamily CDA09_20555 8db0c2d2d3f242b3874d1c09c28f9008 258 Pfam PF03372 Endonuclease/Exonuclease/phosphatase family 6 247 1.6E-16 T 01-11-2018 IPR005135 Endonuclease/exonuclease/phosphatase CDA09_20555 8db0c2d2d3f242b3874d1c09c28f9008 258 SUPERFAMILY SSF56219 2 252 1.13E-36 T 01-11-2018 IPR036691 Endonuclease/exonuclease/phosphatase superfamily CDA09_20180 0290b233f82fabddf63a7b3c8c74b99d 593 Pfam PF04183 IucA / IucC family 167 382 3.7E-37 T 01-11-2018 IPR007310 Aerobactin siderophore biosynthesis, IucA/IucC, N-terminal GO:0019290 CDA09_20180 0290b233f82fabddf63a7b3c8c74b99d 593 Gene3D G3DSA:1.10.510.40 372 537 1.6E-6 T 01-11-2018 CDA09_20180 0290b233f82fabddf63a7b3c8c74b99d 593 Pfam PF06276 Ferric iron reductase FhuF-like transporter 405 564 1.0E-16 T 01-11-2018 IPR022770 Ferric iron reductase FhuF domain CDA09_19975 5cb85e21f4ed350aae6b844c409a51a6 189 Pfam PF01478 Type IV leader peptidase family 7 119 3.9E-18 T 01-11-2018 IPR000045 Prepilin type IV endopeptidase, peptidase domain GO:0004190|GO:0016020 CDA09_19975 5cb85e21f4ed350aae6b844c409a51a6 189 Gene3D G3DSA:1.20.120.1220 1 143 7.8E-7 T 01-11-2018 CDA09_06060 dc3de867b42313bdf9610c8c2511810a 262 SUPERFAMILY SSF75217 9 255 2.62E-95 T 01-11-2018 IPR029028 Alpha/beta knot methyltransferases CDA09_06060 dc3de867b42313bdf9610c8c2511810a 262 Gene3D G3DSA:1.10.1270.20 173 262 6.8E-32 T 01-11-2018 IPR023148 tRNA (guanine-N1-)-methyltransferase, C-terminal GO:0008033|GO:0052906 MetaCyc: PWY-6829|MetaCyc: PWY-7285|MetaCyc: PWY-7286 CDA09_06060 dc3de867b42313bdf9610c8c2511810a 262 Hamap MF_00605 tRNA (guanine-N(1)-)-methyltransferase [trmD]. 1 262 109.582 T 01-11-2018 IPR002649 tRNA (guanine-N1-)-methyltransferase, bacteria GO:0008033|GO:0052906 MetaCyc: PWY-6829|MetaCyc: PWY-7285|MetaCyc: PWY-7286 CDA09_06060 dc3de867b42313bdf9610c8c2511810a 262 Gene3D G3DSA:3.40.1280.10 8 172 3.3E-62 T 01-11-2018 IPR029026 tRNA (guanine-N1-)-methyltransferase, N-terminal CDA09_06060 dc3de867b42313bdf9610c8c2511810a 262 PIRSF PIRSF000386 8 261 3.3E-91 T 01-11-2018 IPR002649 tRNA (guanine-N1-)-methyltransferase, bacteria GO:0008033|GO:0052906 MetaCyc: PWY-6829|MetaCyc: PWY-7285|MetaCyc: PWY-7286 CDA09_06060 dc3de867b42313bdf9610c8c2511810a 262 TIGRFAM TIGR00088 trmD: tRNA (guanine(37)-N(1))-methyltransferase 9 242 3.3E-90 T 01-11-2018 IPR002649 tRNA (guanine-N1-)-methyltransferase, bacteria GO:0008033|GO:0052906 MetaCyc: PWY-6829|MetaCyc: PWY-7285|MetaCyc: PWY-7286 CDA09_06060 dc3de867b42313bdf9610c8c2511810a 262 Pfam PF01746 tRNA (Guanine-1)-methyltransferase 30 232 8.6E-56 T 01-11-2018 IPR016009 tRNA methyltransferase TRMD/TRM10-type domain MetaCyc: PWY-6829|MetaCyc: PWY-7285|MetaCyc: PWY-7286 CDA09_13170 a684828a0b9fbbab5fec61e5f8073fd7 651 SUPERFAMILY SSF52540 188 606 4.85E-8 T 01-11-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CDA09_13170 a684828a0b9fbbab5fec61e5f8073fd7 651 Pfam PF13307 Helicase C-terminal domain 466 628 1.0E-34 T 01-11-2018 IPR006555 ATP-dependent helicase, C-terminal GO:0003676|GO:0005524|GO:0006139|GO:0008026|GO:0016818 CDA09_13170 a684828a0b9fbbab5fec61e5f8073fd7 651 Gene3D G3DSA:3.40.50.300 21 282 1.2E-49 T 01-11-2018 CDA09_13170 a684828a0b9fbbab5fec61e5f8073fd7 651 SUPERFAMILY SSF52540 18 612 2.51E-25 T 01-11-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CDA09_13170 a684828a0b9fbbab5fec61e5f8073fd7 651 SMART SM00487 19 307 0.0073 T 01-11-2018 IPR014001 Helicase superfamily 1/2, ATP-binding domain CDA09_13170 a684828a0b9fbbab5fec61e5f8073fd7 651 Gene3D G3DSA:3.40.50.300 448 644 1.4E-38 T 01-11-2018 CDA09_13170 a684828a0b9fbbab5fec61e5f8073fd7 651 SMART SM00491 481 615 7.0E-38 T 01-11-2018 IPR006555 ATP-dependent helicase, C-terminal GO:0003676|GO:0005524|GO:0006139|GO:0008026|GO:0016818 CDA09_00435 8fae860365afe7f387df621707ec868c 123 SUPERFAMILY SSF54909 1 102 1.1E-20 T 01-11-2018 IPR011008 Dimeric alpha-beta barrel CDA09_00435 8fae860365afe7f387df621707ec868c 123 Pfam PF07110 EthD domain 19 91 8.7E-8 T 01-11-2018 IPR009799 EthD domain CDA09_00435 8fae860365afe7f387df621707ec868c 123 Gene3D G3DSA:3.30.70.100 2 100 1.3E-33 T 01-11-2018 CDA09_00435 8fae860365afe7f387df621707ec868c 123 TIGRFAM TIGR02118 TIGR02118: conserved hypothetical protein 1 101 7.5E-30 T 01-11-2018 IPR009799 EthD domain CDA09_02320 12bd208abdcb49a8410d822bd1de4e1b 185 PRINTS PR00696 Crossover junction endodeoxyribonuclease RUVC signature 15 28 8.3E-34 T 01-11-2018 IPR002176 Crossover junction endodeoxyribonuclease RuvC GO:0004520|GO:0006281|GO:0006310 CDA09_02320 12bd208abdcb49a8410d822bd1de4e1b 185 PRINTS PR00696 Crossover junction endodeoxyribonuclease RUVC signature 148 160 8.3E-34 T 01-11-2018 IPR002176 Crossover junction endodeoxyribonuclease RuvC GO:0004520|GO:0006281|GO:0006310 CDA09_02320 12bd208abdcb49a8410d822bd1de4e1b 185 PRINTS PR00696 Crossover junction endodeoxyribonuclease RUVC signature 71 87 8.3E-34 T 01-11-2018 IPR002176 Crossover junction endodeoxyribonuclease RuvC GO:0004520|GO:0006281|GO:0006310 CDA09_02320 12bd208abdcb49a8410d822bd1de4e1b 185 PRINTS PR00696 Crossover junction endodeoxyribonuclease RUVC signature 117 136 8.3E-34 T 01-11-2018 IPR002176 Crossover junction endodeoxyribonuclease RuvC GO:0004520|GO:0006281|GO:0006310 CDA09_02320 12bd208abdcb49a8410d822bd1de4e1b 185 PRINTS PR00696 Crossover junction endodeoxyribonuclease RUVC signature 93 109 8.3E-34 T 01-11-2018 IPR002176 Crossover junction endodeoxyribonuclease RuvC GO:0004520|GO:0006281|GO:0006310 CDA09_02320 12bd208abdcb49a8410d822bd1de4e1b 185 Gene3D G3DSA:3.30.420.10 14 164 2.9E-48 T 01-11-2018 IPR036397 Ribonuclease H superfamily GO:0003676 CDA09_02320 12bd208abdcb49a8410d822bd1de4e1b 185 ProSitePatterns PS01321 Crossover junction endodeoxyribonuclease ruvC signature. 123 157 - T 01-11-2018 IPR020563 Crossover junction endodeoxyribonuclease RuvC, magnesium-binding site GO:0008821 CDA09_02320 12bd208abdcb49a8410d822bd1de4e1b 185 Pfam PF02075 Crossover junction endodeoxyribonuclease RuvC 14 160 1.5E-54 T 01-11-2018 IPR002176 Crossover junction endodeoxyribonuclease RuvC GO:0004520|GO:0006281|GO:0006310 CDA09_02320 12bd208abdcb49a8410d822bd1de4e1b 185 Hamap MF_00034 Crossover junction endodeoxyribonuclease RuvC [ruvC]. 12 163 47.177 T 01-11-2018 IPR002176 Crossover junction endodeoxyribonuclease RuvC GO:0004520|GO:0006281|GO:0006310 CDA09_02320 12bd208abdcb49a8410d822bd1de4e1b 185 TIGRFAM TIGR00228 ruvC: crossover junction endodeoxyribonuclease RuvC 14 162 1.7E-54 T 01-11-2018 IPR002176 Crossover junction endodeoxyribonuclease RuvC GO:0004520|GO:0006281|GO:0006310 CDA09_02320 12bd208abdcb49a8410d822bd1de4e1b 185 SUPERFAMILY SSF53098 13 164 5.56E-54 T 01-11-2018 IPR012337 Ribonuclease H-like superfamily CDA09_16340 aaab258fd6aca6e543a1265f24d075ae 131 Pfam PF04020 Mycobacterial 4 TMS phage holin, superfamily IV 6 108 3.2E-27 T 01-11-2018 IPR007165 Mycobacterial 4 TMS phage holin, superfamily IV CDA09_22880 45b7f6ed1451239181ddb28758a9172a 354 Gene3D G3DSA:3.90.650.10 175 354 1.3E-56 T 01-11-2018 IPR036676 PurM-like, C-terminal domain superfamily CDA09_22880 45b7f6ed1451239181ddb28758a9172a 354 Pfam PF02769 AIR synthase related protein, C-terminal domain 180 331 6.4E-29 T 01-11-2018 IPR010918 PurM-like, C-terminal domain CDA09_22880 45b7f6ed1451239181ddb28758a9172a 354 SUPERFAMILY SSF56042 175 350 9.42E-48 T 01-11-2018 IPR036676 PurM-like, C-terminal domain superfamily CDA09_22880 45b7f6ed1451239181ddb28758a9172a 354 SUPERFAMILY SSF55326 24 171 6.11E-35 T 01-11-2018 IPR036921 PurM-like, N-terminal domain superfamily CDA09_22880 45b7f6ed1451239181ddb28758a9172a 354 PIRSF PIRSF005644 17 354 5.1E-124 T 01-11-2018 IPR011854 Carbamoyl dehydratase HypE CDA09_22880 45b7f6ed1451239181ddb28758a9172a 354 Gene3D G3DSA:3.30.1330.10 24 171 1.7E-51 T 01-11-2018 IPR036921 PurM-like, N-terminal domain superfamily CDA09_22880 45b7f6ed1451239181ddb28758a9172a 354 TIGRFAM TIGR02124 hypE: hydrogenase expression/formation protein HypE 21 354 2.1E-137 T 01-11-2018 IPR011854 Carbamoyl dehydratase HypE CDA09_22880 45b7f6ed1451239181ddb28758a9172a 354 Pfam PF00586 AIR synthase related protein, N-terminal domain 54 167 2.2E-18 T 01-11-2018 IPR016188 PurM-like, N-terminal domain CDA09_05060 e1245227e69304f3e524ba1a9721c2a7 223 SUPERFAMILY SSF46785 152 218 1.4E-13 T 01-11-2018 IPR036390 Winged helix DNA-binding domain superfamily CDA09_05060 e1245227e69304f3e524ba1a9721c2a7 223 Gene3D G3DSA:2.60.120.10 9 147 2.4E-40 T 01-11-2018 IPR014710 RmlC-like jelly roll fold CDA09_05060 e1245227e69304f3e524ba1a9721c2a7 223 SUPERFAMILY SSF51206 12 149 2.75E-27 T 01-11-2018 IPR018490 Cyclic nucleotide-binding-like CDA09_05060 e1245227e69304f3e524ba1a9721c2a7 223 SMART SM00419 161 209 8.6E-10 T 01-11-2018 IPR012318 Crp-type HTH domain GO:0003677|GO:0006355 CDA09_05060 e1245227e69304f3e524ba1a9721c2a7 223 Gene3D G3DSA:1.10.10.10 148 218 1.6E-15 T 01-11-2018 IPR036388 Winged helix-like DNA-binding domain superfamily CDA09_05060 e1245227e69304f3e524ba1a9721c2a7 223 Pfam PF13545 Crp-like helix-turn-helix domain 154 215 3.8E-14 T 01-11-2018 IPR012318 Crp-type HTH domain GO:0003677|GO:0006355 CDA09_05060 e1245227e69304f3e524ba1a9721c2a7 223 Pfam PF00027 Cyclic nucleotide-binding domain 35 121 9.1E-13 T 01-11-2018 IPR000595 Cyclic nucleotide-binding domain CDA09_09390 d8ab795c8a677861756b791a636b0713 339 Pfam PF12172 Rubredoxin-like zinc ribbon domain (DUF35_N) 222 258 5.5E-12 T 01-11-2018 IPR022002 Domain of unknown function DUF35, rubredoxin-like zinc ribbon domain, N-terminal CDA09_09390 d8ab795c8a677861756b791a636b0713 339 SUPERFAMILY SSF50249 208 327 1.37E-31 T 01-11-2018 IPR012340 Nucleic acid-binding, OB-fold CDA09_09390 d8ab795c8a677861756b791a636b0713 339 Pfam PF01796 DUF35 OB-fold domain, acyl-CoA-associated 260 322 3.8E-18 T 01-11-2018 IPR002878 Domain of unknown function DUF35, OB-fold, C-terminal CDA09_09390 d8ab795c8a677861756b791a636b0713 339 Pfam PF13452 N-terminal half of MaoC dehydratase 23 158 2.5E-14 T 01-11-2018 IPR039569 N-terminal of MaoC-like dehydratase Reactome: R-HSA-193368|Reactome: R-HSA-2046106|Reactome: R-HSA-389887|Reactome: R-HSA-390247|Reactome: R-HSA-9033241|Reactome: R-HSA-9033500 CDA09_09390 d8ab795c8a677861756b791a636b0713 339 Gene3D G3DSA:3.10.129.10 17 195 2.9E-49 T 01-11-2018 CDA09_09390 d8ab795c8a677861756b791a636b0713 339 SUPERFAMILY SSF54637 24 184 1.76E-13 T 01-11-2018 IPR029069 HotDog domain superfamily CDA09_21100 5a85eb500a4c1f12543df4211c2c67be 1072 Gene3D G3DSA:3.40.710.10 797 1024 3.6E-16 T 01-11-2018 CDA09_21100 5a85eb500a4c1f12543df4211c2c67be 1072 SUPERFAMILY SSF56601 491 935 7.01E-8 T 01-11-2018 IPR012338 Beta-lactamase/transpeptidase-like CDA09_21100 5a85eb500a4c1f12543df4211c2c67be 1072 SUPERFAMILY SSF56601 735 1009 1.28E-29 T 01-11-2018 IPR012338 Beta-lactamase/transpeptidase-like CDA09_21100 5a85eb500a4c1f12543df4211c2c67be 1072 Pfam PF00912 Transglycosylase 149 341 3.3E-23 T 01-11-2018 IPR001264 Glycosyl transferase, family 51 KEGG: 00550+2.4.1.129|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471 CDA09_21100 5a85eb500a4c1f12543df4211c2c67be 1072 SUPERFAMILY SSF53955 156 305 1.35E-6 T 01-11-2018 IPR023346 Lysozyme-like domain superfamily CDA09_04370 2a160758470d9c07f11f86b0356cc495 386 PIRSF PIRSF001554 1 386 3.9E-147 T 01-11-2018 IPR005809 Succinate--CoA synthetase, beta subunit GO:0006099 KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384|Reactome: R-HSA-71403 CDA09_04370 2a160758470d9c07f11f86b0356cc495 386 ProSitePatterns PS01217 ATP-citrate lyase / succinyl-CoA ligases family signature 3. 257 281 - T 01-11-2018 IPR017866 Succinyl-CoA synthetase, beta subunit, conserved site KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384 CDA09_04370 2a160758470d9c07f11f86b0356cc495 386 Hamap MF_00558 Succinate--CoA ligase [ADP-forming] subunit beta [sucC]. 1 386 42.702 T 01-11-2018 IPR005809 Succinate--CoA synthetase, beta subunit GO:0006099 KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384|Reactome: R-HSA-71403 CDA09_04370 2a160758470d9c07f11f86b0356cc495 386 TIGRFAM TIGR01016 sucCoAbeta: succinate-CoA ligase, beta subunit 1 385 4.2E-155 T 01-11-2018 IPR005809 Succinate--CoA synthetase, beta subunit GO:0006099 KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384|Reactome: R-HSA-71403 CDA09_04370 2a160758470d9c07f11f86b0356cc495 386 SUPERFAMILY SSF56059 1 238 2.16E-81 T 01-11-2018 CDA09_04370 2a160758470d9c07f11f86b0356cc495 386 SUPERFAMILY SSF52210 242 385 6.02E-53 T 01-11-2018 IPR016102 Succinyl-CoA synthetase-like KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384 CDA09_04370 2a160758470d9c07f11f86b0356cc495 386 Gene3D G3DSA:3.30.1490.20 21 104 1.1E-92 T 01-11-2018 IPR013815 ATP-grasp fold, subdomain 1 GO:0005524 CDA09_04370 2a160758470d9c07f11f86b0356cc495 386 Gene3D G3DSA:3.40.50.261 240 386 1.9E-56 T 01-11-2018 IPR016102 Succinyl-CoA synthetase-like KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384 CDA09_04370 2a160758470d9c07f11f86b0356cc495 386 Pfam PF00549 CoA-ligase 262 381 1.1E-26 T 01-11-2018 IPR005811 ATP-citrate lyase/succinyl-CoA ligase GO:0003824 KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384 CDA09_04370 2a160758470d9c07f11f86b0356cc495 386 Pfam PF08442 ATP-grasp domain 2 202 1.2E-77 T 01-11-2018 IPR013650 ATP-grasp fold, succinyl-CoA synthetase-type KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384|Reactome: R-HSA-71403 CDA09_04370 2a160758470d9c07f11f86b0356cc495 386 Gene3D G3DSA:3.30.470.20 1 234 1.1E-92 T 01-11-2018 CDA09_11705 1739c1e47873fb879f499790e02ceabe 290 Gene3D G3DSA:1.10.3210.10 20 286 4.7E-48 T 01-11-2018 CDA09_11705 1739c1e47873fb879f499790e02ceabe 290 Pfam PF08668 HDOD domain 36 224 2.4E-32 T 01-11-2018 IPR013976 Metal-dependent hydrolase HDOD CDA09_11705 1739c1e47873fb879f499790e02ceabe 290 SUPERFAMILY SSF109604 29 271 1.06E-45 T 01-11-2018 CDA09_16380 e235f43c4e8f0bc3dd21ffcb90f7f74c 191 PRINTS PR00153 Cyclophilin peptidyl-prolyl cis-trans isomerase signature 36 51 3.1E-14 T 01-11-2018 IPR002130 Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain GO:0000413|GO:0003755 CDA09_16380 e235f43c4e8f0bc3dd21ffcb90f7f74c 191 PRINTS PR00153 Cyclophilin peptidyl-prolyl cis-trans isomerase signature 62 74 3.1E-14 T 01-11-2018 IPR002130 Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain GO:0000413|GO:0003755 CDA09_16380 e235f43c4e8f0bc3dd21ffcb90f7f74c 191 PRINTS PR00153 Cyclophilin peptidyl-prolyl cis-trans isomerase signature 137 152 3.1E-14 T 01-11-2018 IPR002130 Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain GO:0000413|GO:0003755 CDA09_16380 e235f43c4e8f0bc3dd21ffcb90f7f74c 191 ProSitePatterns PS00170 Cyclophilin-type peptidyl-prolyl cis-trans isomerase signature. 57 74 - T 01-11-2018 IPR020892 Cyclophilin-type peptidyl-prolyl cis-trans isomerase, conserved site GO:0003755|GO:0006457 CDA09_16380 e235f43c4e8f0bc3dd21ffcb90f7f74c 191 SUPERFAMILY SSF50891 18 182 1.37E-59 T 01-11-2018 IPR029000 Cyclophilin-like domain superfamily CDA09_16380 e235f43c4e8f0bc3dd21ffcb90f7f74c 191 Pfam PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD 23 181 3.7E-47 T 01-11-2018 IPR002130 Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain GO:0000413|GO:0003755 CDA09_16380 e235f43c4e8f0bc3dd21ffcb90f7f74c 191 Gene3D G3DSA:2.40.100.10 18 182 5.1E-64 T 01-11-2018 IPR029000 Cyclophilin-like domain superfamily CDA09_02745 409fd385c577358ceb3385112c8ce128 361 Pfam PF00768 D-alanyl-D-alanine carboxypeptidase 106 327 1.4E-54 T 01-11-2018 IPR001967 Peptidase S11, D-alanyl-D-alanine carboxypeptidase A, N-terminal GO:0006508|GO:0009002 CDA09_02745 409fd385c577358ceb3385112c8ce128 361 SUPERFAMILY SSF56601 107 344 5.39E-56 T 01-11-2018 IPR012338 Beta-lactamase/transpeptidase-like CDA09_02745 409fd385c577358ceb3385112c8ce128 361 Gene3D G3DSA:3.40.710.10 78 358 1.7E-61 T 01-11-2018 CDA09_02745 409fd385c577358ceb3385112c8ce128 361 PRINTS PR00725 D-Ala-D-Ala carboxypeptidase 1 (S11) family signature 212 225 2.0E-12 T 01-11-2018 IPR018044 Peptidase S11, D-alanyl-D-alanine carboxypeptidase A GO:0006508|GO:0009002 CDA09_02745 409fd385c577358ceb3385112c8ce128 361 PRINTS PR00725 D-Ala-D-Ala carboxypeptidase 1 (S11) family signature 185 202 2.0E-12 T 01-11-2018 IPR018044 Peptidase S11, D-alanyl-D-alanine carboxypeptidase A GO:0006508|GO:0009002 CDA09_02745 409fd385c577358ceb3385112c8ce128 361 PRINTS PR00725 D-Ala-D-Ala carboxypeptidase 1 (S11) family signature 135 146 2.0E-12 T 01-11-2018 IPR018044 Peptidase S11, D-alanyl-D-alanine carboxypeptidase A GO:0006508|GO:0009002 CDA09_19555 e712e75881e1e0341a44e11b5414fe12 1408 Gene3D G3DSA:2.40.50.100 950 1025 1.2E-25 T 01-11-2018 CDA09_19555 e712e75881e1e0341a44e11b5414fe12 1408 Gene3D G3DSA:1.10.274.100 566 642 5.8E-15 T 01-11-2018 CDA09_19555 e712e75881e1e0341a44e11b5414fe12 1408 Gene3D G3DSA:1.10.274.100 492 565 2.7E-20 T 01-11-2018 CDA09_19555 e712e75881e1e0341a44e11b5414fe12 1408 Gene3D G3DSA:3.90.105.10 832 886 9.9E-6 T 01-11-2018 CDA09_19555 e712e75881e1e0341a44e11b5414fe12 1408 SUPERFAMILY SSF64484 19 1367 0.0 T 01-11-2018 CDA09_19555 e712e75881e1e0341a44e11b5414fe12 1408 Pfam PF04998 RNA polymerase Rpb1, domain 5 768 1319 3.0E-77 T 01-11-2018 IPR007081 RNA polymerase Rpb1, domain 5 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 CDA09_19555 e712e75881e1e0341a44e11b5414fe12 1408 Gene3D G3DSA:1.10.1790.20 1139 1317 6.0E-65 T 01-11-2018 CDA09_19555 e712e75881e1e0341a44e11b5414fe12 1408 Hamap MF_01322 DNA-directed RNA polymerase subunit beta' [rpoC]. 13 1380 18.782 T 01-11-2018 IPR012754 DNA-directed RNA polymerase, subunit beta-prime GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 CDA09_19555 e712e75881e1e0341a44e11b5414fe12 1408 Gene3D G3DSA:1.10.132.30 643 792 3.2E-64 T 01-11-2018 IPR038120 RNA polymerase Rpb1, funnel domain superfamily KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 CDA09_19555 e712e75881e1e0341a44e11b5414fe12 1408 Pfam PF04983 RNA polymerase Rpb1, domain 3 491 646 1.4E-24 T 01-11-2018 IPR007066 RNA polymerase Rpb1, domain 3 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 CDA09_19555 e712e75881e1e0341a44e11b5414fe12 1408 Gene3D G3DSA:2.40.50.100 1155 1218 6.0E-65 T 01-11-2018 CDA09_19555 e712e75881e1e0341a44e11b5414fe12 1408 Gene3D G3DSA:1.10.150.390 1319 1379 8.7E-29 T 01-11-2018 CDA09_19555 e712e75881e1e0341a44e11b5414fe12 1408 Pfam PF04997 RNA polymerase Rpb1, domain 1 18 344 7.5E-84 T 01-11-2018 IPR007080 RNA polymerase Rpb1, domain 1 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 CDA09_19555 e712e75881e1e0341a44e11b5414fe12 1408 Gene3D G3DSA:2.40.50.100 1026 1130 7.3E-29 T 01-11-2018 CDA09_19555 e712e75881e1e0341a44e11b5414fe12 1408 Pfam PF05000 RNA polymerase Rpb1, domain 4 675 765 2.4E-19 T 01-11-2018 IPR007083 RNA polymerase Rpb1, domain 4 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 CDA09_19555 e712e75881e1e0341a44e11b5414fe12 1408 Pfam PF00623 RNA polymerase Rpb1, domain 2 346 487 3.4E-34 T 01-11-2018 IPR000722 RNA polymerase, alpha subunit GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 CDA09_19555 e712e75881e1e0341a44e11b5414fe12 1408 TIGRFAM TIGR02386 rpoC_TIGR: DNA-directed RNA polymerase, beta' subunit 22 1370 0.0 T 01-11-2018 IPR012754 DNA-directed RNA polymerase, subunit beta-prime GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 CDA09_19555 e712e75881e1e0341a44e11b5414fe12 1408 Gene3D G3DSA:1.10.40.90 376 418 3.1E-20 T 01-11-2018 CDA09_19555 e712e75881e1e0341a44e11b5414fe12 1408 SMART SM00663 237 516 1.3E-177 T 01-11-2018 IPR006592 RNA polymerase, N-terminal GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 CDA09_14620 1dacb3288c392279f8fa944a7d99a571 448 Gene3D G3DSA:3.40.1670.10 307 420 1.4E-21 T 01-11-2018 CDA09_14620 1dacb3288c392279f8fa944a7d99a571 448 Pfam PF01977 3-octaprenyl-4-hydroxybenzoate carboxy-lyase 15 394 6.9E-107 T 01-11-2018 IPR002830 UbiD decarboxylyase family GO:0016831 KEGG: 00130+4.1.1.98|MetaCyc: PWY-5855|MetaCyc: PWY-5856|MetaCyc: PWY-5857|MetaCyc: PWY-6708|MetaCyc: PWY-6978 CDA09_14620 1dacb3288c392279f8fa944a7d99a571 448 SUPERFAMILY SSF143968 295 435 3.14E-26 T 01-11-2018 CDA09_14620 1dacb3288c392279f8fa944a7d99a571 448 SUPERFAMILY SSF50475 3 290 9.02E-78 T 01-11-2018 CDA09_14620 1dacb3288c392279f8fa944a7d99a571 448 TIGRFAM TIGR00148 TIGR00148: decarboxylase, UbiD family 6 419 4.2E-91 T 01-11-2018 IPR002830 UbiD decarboxylyase family GO:0016831 KEGG: 00130+4.1.1.98|MetaCyc: PWY-5855|MetaCyc: PWY-5856|MetaCyc: PWY-5857|MetaCyc: PWY-6708|MetaCyc: PWY-6978 CDA09_16485 357a0295e58b5098220a25aa11820d27 104 Gene3D G3DSA:3.30.70.260 8 104 1.9E-32 T 01-11-2018 CDA09_16485 357a0295e58b5098220a25aa11820d27 104 ProDom PD002844 SMALL SUBUNIT ACETOLACTATE SYNTHASE SYNTHASE TRANSFERASE ACID BIOSYNTHESIS III LYASE 23 86 6.0E-16 T 01-11-2018 CDA09_16485 357a0295e58b5098220a25aa11820d27 104 Pfam PF13710 ACT domain 26 86 5.1E-9 T 01-11-2018 CDA09_16485 357a0295e58b5098220a25aa11820d27 104 SUPERFAMILY SSF55021 16 89 2.7E-15 T 01-11-2018 CDA09_08520 f2cc24d96814a9c01f22f4c6aa91e5c1 140 Pfam PF00571 CBS domain 76 120 1.9E-13 T 01-11-2018 IPR000644 CBS domain CDA09_08520 f2cc24d96814a9c01f22f4c6aa91e5c1 140 Pfam PF00571 CBS domain 14 59 7.8E-4 T 01-11-2018 IPR000644 CBS domain CDA09_08520 f2cc24d96814a9c01f22f4c6aa91e5c1 140 Gene3D G3DSA:3.10.580.10 2 137 2.0E-33 T 01-11-2018 CDA09_08520 f2cc24d96814a9c01f22f4c6aa91e5c1 140 SMART SM00116 79 126 6.8E-11 T 01-11-2018 IPR000644 CBS domain CDA09_08520 f2cc24d96814a9c01f22f4c6aa91e5c1 140 SMART SM00116 14 62 0.001 T 01-11-2018 IPR000644 CBS domain CDA09_08520 f2cc24d96814a9c01f22f4c6aa91e5c1 140 SUPERFAMILY SSF54631 13 124 9.47E-29 T 01-11-2018 CDA09_14980 33b72d514c04dd4fe870b2dc1b2548e7 255 TIGRFAM TIGR01172 cysE: serine O-acetyltransferase 6 167 3.1E-73 T 01-11-2018 IPR005881 Serine O-acetyltransferase GO:0005737|GO:0006535|GO:0009001 KEGG: 00270+2.3.1.30|KEGG: 00920+2.3.1.30|KEGG: 00999+2.3.1.30|MetaCyc: PWY-6936|MetaCyc: PWY-7274|MetaCyc: PWY-7870 CDA09_14980 33b72d514c04dd4fe870b2dc1b2548e7 255 Gene3D G3DSA:2.160.10.10 67 192 3.6E-38 T 01-11-2018 CDA09_14980 33b72d514c04dd4fe870b2dc1b2548e7 255 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 71 107 3.7E-5 T 01-11-2018 IPR001451 Hexapeptide repeat CDA09_14980 33b72d514c04dd4fe870b2dc1b2548e7 255 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 118 151 1.1E-6 T 01-11-2018 IPR001451 Hexapeptide repeat CDA09_14980 33b72d514c04dd4fe870b2dc1b2548e7 255 Gene3D G3DSA:1.10.3130.10 1 66 3.9E-21 T 01-11-2018 CDA09_14980 33b72d514c04dd4fe870b2dc1b2548e7 255 SUPERFAMILY SSF51161 2 171 1.52E-57 T 01-11-2018 IPR011004 Trimeric LpxA-like superfamily CDA09_01040 660eada39478259c1761c1083dc81580 208 Pfam PF13624 SurA N-terminal domain 21 138 8.6E-15 T 01-11-2018 CDA09_01040 660eada39478259c1761c1083dc81580 208 SUPERFAMILY SSF109998 23 178 3.92E-24 T 01-11-2018 IPR027304 Trigger factor/SurA domain superfamily CDA09_01040 660eada39478259c1761c1083dc81580 208 Gene3D G3DSA:1.10.4030.30 23 207 6.2E-23 T 01-11-2018 CDA09_03590 c4027a7a18ea41d6e9fbf79488aac50c 307 Gene3D G3DSA:3.10.620.30 100 284 2.4E-46 T 01-11-2018 CDA09_03590 c4027a7a18ea41d6e9fbf79488aac50c 307 SMART SM00460 180 250 8.7E-22 T 01-11-2018 IPR002931 Transglutaminase-like CDA09_03590 c4027a7a18ea41d6e9fbf79488aac50c 307 Pfam PF01841 Transglutaminase-like superfamily 150 248 6.6E-23 T 01-11-2018 IPR002931 Transglutaminase-like CDA09_03590 c4027a7a18ea41d6e9fbf79488aac50c 307 Pfam PF08379 Bacterial transglutaminase-like N-terminal region 3 78 9.9E-22 T 01-11-2018 IPR013589 Bacterial transglutaminase-like, N-terminal CDA09_03590 c4027a7a18ea41d6e9fbf79488aac50c 307 SUPERFAMILY SSF54001 122 275 8.95E-43 T 01-11-2018 IPR038765 Papain-like cysteine peptidase superfamily CDA09_21290 20b993de89e7688edd507c351274f62b 409 Pfam PF07669 Eco57I restriction-modification methylase 82 181 4.6E-8 T 01-11-2018 IPR011639 Restriction modification methylase Eco57I GO:0003677|GO:0003824|GO:0006304 CDA09_21290 20b993de89e7688edd507c351274f62b 409 ProSitePatterns PS00092 N-6 Adenine-specific DNA methylases signature. 86 92 - T 01-11-2018 IPR002052 DNA methylase, N-6 adenine-specific, conserved site GO:0003676|GO:0008168|GO:0032259 CDA09_21290 20b993de89e7688edd507c351274f62b 409 SUPERFAMILY SSF53335 15 191 1.08E-31 T 01-11-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase CDA09_21290 20b993de89e7688edd507c351274f62b 409 PRINTS PR00507 N12 class N6 adenine-specific DNA methyltransferase signature 116 140 3.5E-21 T 01-11-2018 CDA09_21290 20b993de89e7688edd507c351274f62b 409 PRINTS PR00507 N12 class N6 adenine-specific DNA methyltransferase signature 83 95 3.5E-21 T 01-11-2018 CDA09_21290 20b993de89e7688edd507c351274f62b 409 PRINTS PR00507 N12 class N6 adenine-specific DNA methyltransferase signature 38 52 3.5E-21 T 01-11-2018 CDA09_21290 20b993de89e7688edd507c351274f62b 409 PRINTS PR00507 N12 class N6 adenine-specific DNA methyltransferase signature 16 32 3.5E-21 T 01-11-2018 CDA09_21290 20b993de89e7688edd507c351274f62b 409 Gene3D G3DSA:3.40.50.150 18 202 1.5E-33 T 01-11-2018 CDA09_04770 5e9f018be4d47c52a07b4db1d0b265b5 477 ProSitePatterns PS00687 Aldehyde dehydrogenases glutamic acid active site. 247 254 - T 01-11-2018 IPR029510 Aldehyde dehydrogenase, glutamic acid active site GO:0016491|GO:0055114 CDA09_04770 5e9f018be4d47c52a07b4db1d0b265b5 477 SUPERFAMILY SSF53720 3 475 1.3E-159 T 01-11-2018 IPR016161 Aldehyde/histidinol dehydrogenase GO:0016491|GO:0055114 CDA09_04770 5e9f018be4d47c52a07b4db1d0b265b5 477 Pfam PF00171 Aldehyde dehydrogenase family 13 472 1.3E-159 T 01-11-2018 IPR015590 Aldehyde dehydrogenase domain GO:0016491|GO:0055114 CDA09_04770 5e9f018be4d47c52a07b4db1d0b265b5 477 Gene3D G3DSA:3.40.309.10 251 441 9.8E-171 T 01-11-2018 IPR016163 Aldehyde dehydrogenase, C-terminal GO:0016491|GO:0016620|GO:0055114 CDA09_04770 5e9f018be4d47c52a07b4db1d0b265b5 477 ProSitePatterns PS00070 Aldehyde dehydrogenases cysteine active site. 275 286 - T 01-11-2018 IPR016160 Aldehyde dehydrogenase, cysteine active site GO:0016491|GO:0055114 CDA09_04770 5e9f018be4d47c52a07b4db1d0b265b5 477 Gene3D G3DSA:3.40.605.10 23 466 9.8E-171 T 01-11-2018 IPR016162 Aldehyde dehydrogenase, N-terminal GO:0016491|GO:0055114 CDA09_08980 158db10e7ea9158fed050dd5b21d68d8 557 SUPERFAMILY SSF53041 4 156 2.88E-19 T 01-11-2018 IPR036162 Resolvase-like, N-terminal catalytic domain superfamily GO:0000150|GO:0003677|GO:0006310 CDA09_08980 158db10e7ea9158fed050dd5b21d68d8 557 Pfam PF00239 Resolvase, N terminal domain 7 154 6.7E-21 T 01-11-2018 IPR006119 Resolvase, N-terminal catalytic domain GO:0000150|GO:0003677|GO:0006310 CDA09_08980 158db10e7ea9158fed050dd5b21d68d8 557 Gene3D G3DSA:3.40.50.1390 1 137 1.5E-21 T 01-11-2018 CDA09_08980 158db10e7ea9158fed050dd5b21d68d8 557 Pfam PF07508 Recombinase 187 292 1.3E-16 T 01-11-2018 IPR011109 DNA-binding recombinase domain GO:0000150|GO:0003677 CDA09_08980 158db10e7ea9158fed050dd5b21d68d8 557 Gene3D G3DSA:1.10.10.2600 140 294 1.9E-11 T 01-11-2018 IPR038109 DNA-binding recombinase domain superfamily CDA09_08980 158db10e7ea9158fed050dd5b21d68d8 557 SMART SM00857 5 156 9.0E-21 T 01-11-2018 IPR006119 Resolvase, N-terminal catalytic domain GO:0000150|GO:0003677|GO:0006310 CDA09_06705 24dde1e5cb401af5659a812ff6a0b778 240 TIGRFAM TIGR03170 flgA_cterm: flagella basal body P-ring formation protein FlgA 104 238 2.6E-40 T 01-11-2018 IPR017585 Flagella basal body P-ring formation protein FlgA, C-terminal CDA09_06705 24dde1e5cb401af5659a812ff6a0b778 240 Pfam PF13144 Chaperone for flagella basal body P-ring formation 40 237 5.5E-51 T 01-11-2018 IPR017585 Flagella basal body P-ring formation protein FlgA, C-terminal CDA09_06705 24dde1e5cb401af5659a812ff6a0b778 240 Gene3D G3DSA:2.30.30.760 182 240 1.4E-21 T 01-11-2018 CDA09_06705 24dde1e5cb401af5659a812ff6a0b778 240 SMART SM00858 116 178 1.8E-10 T 01-11-2018 IPR013974 SAF domain Reactome: R-HSA-4085001 CDA09_06030 3f4d8f79c9ec96ba8fdbafaaf17c6dde 380 TIGRFAM TIGR00056 TIGR00056: ABC transport permease subunit 139 373 3.2E-67 T 01-11-2018 IPR003453 ABC transport permease subunit MlaE, Proteobacteria CDA09_06030 3f4d8f79c9ec96ba8fdbafaaf17c6dde 380 Pfam PF02405 Permease MlaE 165 373 1.1E-67 T 01-11-2018 IPR030802 ABC transporter permease MalE GO:0043190 CDA09_10470 60af5674785ae97431c22334b0c0bc3c 375 Pfam PF13426 PAS domain 43 136 1.6E-9 T 01-11-2018 IPR000014 PAS domain CDA09_10470 60af5674785ae97431c22334b0c0bc3c 375 Gene3D G3DSA:3.30.565.10 240 362 3.5E-27 T 01-11-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily CDA09_10470 60af5674785ae97431c22334b0c0bc3c 375 Gene3D G3DSA:3.30.450.20 26 155 9.2E-20 T 01-11-2018 CDA09_10470 60af5674785ae97431c22334b0c0bc3c 375 SMART SM00387 271 364 7.3E-5 T 01-11-2018 IPR003594 Histidine kinase/HSP90-like ATPase CDA09_10470 60af5674785ae97431c22334b0c0bc3c 375 Pfam PF13581 Histidine kinase-like ATPase domain 259 322 1.5E-6 T 01-11-2018 IPR003594 Histidine kinase/HSP90-like ATPase CDA09_10470 60af5674785ae97431c22334b0c0bc3c 375 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 28 139 1.9E-20 T 01-11-2018 IPR000014 PAS domain CDA09_10470 60af5674785ae97431c22334b0c0bc3c 375 SMART SM00091 25 90 1.3E-5 T 01-11-2018 IPR000014 PAS domain CDA09_10470 60af5674785ae97431c22334b0c0bc3c 375 Pfam PF07730 Histidine kinase 166 232 1.5E-8 T 01-11-2018 IPR011712 Signal transduction histidine kinase, subgroup 3, dimerisation and phosphoacceptor domain GO:0000155|GO:0000160|GO:0016021|GO:0046983 CDA09_10470 60af5674785ae97431c22334b0c0bc3c 375 SUPERFAMILY SSF55785 30 138 6.12E-20 T 01-11-2018 IPR035965 PAS domain superfamily CDA09_10470 60af5674785ae97431c22334b0c0bc3c 375 SUPERFAMILY SSF55874 232 361 3.27E-16 T 01-11-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily CDA09_15285 83fea62c30bd86f843b3b3a8119d8f90 249 TIGRFAM TIGR01830 3oxo_ACP_reduc: 3-oxoacyl-[acyl-carrier-protein] reductase 10 247 2.7E-100 T 01-11-2018 IPR011284 3-oxoacyl-(acyl-carrier-protein) reductase GO:0004316|GO:0006633|GO:0051287|GO:0055114 KEGG: 00061+1.1.1.100|KEGG: 00780+1.1.1.100|MetaCyc: PWY-5367|MetaCyc: PWY-5971|MetaCyc: PWY-5973|MetaCyc: PWY-5989|MetaCyc: PWY-5994|MetaCyc: PWY-6113|MetaCyc: PWY-6282|MetaCyc: PWY-6519|MetaCyc: PWY-7388|MetaCyc: PWY-7663|MetaCyc: PWY-7664|MetaCyc: PWY-7858|MetaCyc: PWYG-321 CDA09_15285 83fea62c30bd86f843b3b3a8119d8f90 249 SMART SM00822 This enzymatic domain is part of bacterial polyketide synthases and catalyses the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain. It uses NADPH to reduce the keto group to a hydroxy group. 8 191 5.7E-5 T 01-11-2018 CDA09_15285 83fea62c30bd86f843b3b3a8119d8f90 249 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 9 26 1.3E-49 T 01-11-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CDA09_15285 83fea62c30bd86f843b3b3a8119d8f90 249 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 156 175 1.3E-49 T 01-11-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CDA09_15285 83fea62c30bd86f843b3b3a8119d8f90 249 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 130 146 1.3E-49 T 01-11-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CDA09_15285 83fea62c30bd86f843b3b3a8119d8f90 249 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 177 194 1.3E-49 T 01-11-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CDA09_15285 83fea62c30bd86f843b3b3a8119d8f90 249 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 210 230 1.3E-49 T 01-11-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CDA09_15285 83fea62c30bd86f843b3b3a8119d8f90 249 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 83 94 1.3E-49 T 01-11-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CDA09_15285 83fea62c30bd86f843b3b3a8119d8f90 249 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 14 246 4.5E-66 T 01-11-2018 CDA09_15285 83fea62c30bd86f843b3b3a8119d8f90 249 SUPERFAMILY SSF51735 6 248 2.32E-86 T 01-11-2018 IPR036291 NAD(P)-binding domain superfamily CDA09_15285 83fea62c30bd86f843b3b3a8119d8f90 249 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 143 171 - T 01-11-2018 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 CDA09_15285 83fea62c30bd86f843b3b3a8119d8f90 249 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 83 94 7.8E-14 T 01-11-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CDA09_15285 83fea62c30bd86f843b3b3a8119d8f90 249 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 156 175 7.8E-14 T 01-11-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CDA09_15285 83fea62c30bd86f843b3b3a8119d8f90 249 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 136 144 7.8E-14 T 01-11-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CDA09_15285 83fea62c30bd86f843b3b3a8119d8f90 249 Gene3D G3DSA:3.40.50.720 1 249 1.4E-85 T 01-11-2018 CDA09_16780 f1a560bad2e692b28f2956153f210d74 69 Pfam PF00403 Heavy-metal-associated domain 5 65 2.6E-17 T 01-11-2018 IPR006121 Heavy metal-associated domain, HMA GO:0030001|GO:0046872 CDA09_16780 f1a560bad2e692b28f2956153f210d74 69 Gene3D G3DSA:3.30.70.100 1 68 2.6E-23 T 01-11-2018 CDA09_16780 f1a560bad2e692b28f2956153f210d74 69 SUPERFAMILY SSF55008 1 67 3.67E-20 T 01-11-2018 IPR036163 Heavy metal-associated domain superfamily GO:0030001|GO:0046872 CDA09_16780 f1a560bad2e692b28f2956153f210d74 69 PRINTS PR00942 Copper-transporting ATPase 1 signature 58 69 3.9E-7 T 01-11-2018 CDA09_16780 f1a560bad2e692b28f2956153f210d74 69 PRINTS PR00942 Copper-transporting ATPase 1 signature 29 52 3.9E-7 T 01-11-2018 CDA09_16780 f1a560bad2e692b28f2956153f210d74 69 PRINTS PR00942 Copper-transporting ATPase 1 signature 3 28 3.9E-7 T 01-11-2018 CDA09_16780 f1a560bad2e692b28f2956153f210d74 69 ProSitePatterns PS01047 Heavy-metal-associated domain. 8 37 - T 01-11-2018 IPR017969 Heavy-metal-associated, conserved site GO:0030001|GO:0046872 CDA09_20740 08d485a1babf6f500c2abf7db37c1aeb 449 Pfam PF09609 CRISPR-associated protein, GSU0054 family (Cas_GSU0054) 10 281 2.6E-7 T 01-11-2018 IPR019089 CRISPR-associated protein, GSU0054 CDA09_20740 08d485a1babf6f500c2abf7db37c1aeb 449 Pfam PF09609 CRISPR-associated protein, GSU0054 family (Cas_GSU0054) 357 435 4.5E-6 T 01-11-2018 IPR019089 CRISPR-associated protein, GSU0054 CDA09_20740 08d485a1babf6f500c2abf7db37c1aeb 449 TIGRFAM TIGR02165 cas5_6_GSU0054: CRISPR-associated protein GSU0054/csb2, Dpsyc system 1 435 2.1E-61 T 01-11-2018 IPR019089 CRISPR-associated protein, GSU0054 CDA09_17655 74b160ae7be2c41c1013470d11fa7f7d 250 SMART SM00852 4 164 3.1E-27 T 01-11-2018 IPR001453 MoaB/Mog domain CDA09_17655 74b160ae7be2c41c1013470d11fa7f7d 250 Pfam PF00994 Probable molybdopterin binding domain 5 158 7.4E-25 T 01-11-2018 IPR001453 MoaB/Mog domain CDA09_17655 74b160ae7be2c41c1013470d11fa7f7d 250 SUPERFAMILY SSF53218 3 197 5.37E-33 T 01-11-2018 IPR036425 MoaB/Mog-like domain superfamily CDA09_17655 74b160ae7be2c41c1013470d11fa7f7d 250 Gene3D G3DSA:3.40.980.10 2 161 1.2E-37 T 01-11-2018 IPR036425 MoaB/Mog-like domain superfamily CDA09_17505 edbb9e2e45fff019151704f1183aafff 395 Gene3D G3DSA:2.140.10.20 11 391 1.0E-47 T 01-11-2018 IPR003143 Cytochrome cd1-nitrite reductase, C-terminal domain superfamily CDA09_17505 edbb9e2e45fff019151704f1183aafff 395 Pfam PF02239 Cytochrome D1 heme domain 30 389 2.1E-102 T 01-11-2018 CDA09_17505 edbb9e2e45fff019151704f1183aafff 395 SUPERFAMILY SSF51004 10 392 8.5E-75 T 01-11-2018 IPR011048 Cytochrome cd1-nitrite reductase-like, haem d1 domain superfamily CDA09_01780 3080d5c0b9b2ac3936e03d7365d14a5a 311 SUPERFAMILY SSF53850 98 304 2.17E-24 T 01-11-2018 CDA09_01780 3080d5c0b9b2ac3936e03d7365d14a5a 311 Gene3D G3DSA:3.40.190.10 178 272 2.7E-16 T 01-11-2018 CDA09_01780 3080d5c0b9b2ac3936e03d7365d14a5a 311 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 15 74 1.2E-15 T 01-11-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 CDA09_01780 3080d5c0b9b2ac3936e03d7365d14a5a 311 Pfam PF03466 LysR substrate binding domain 100 301 7.1E-23 T 01-11-2018 IPR005119 LysR, substrate-binding CDA09_01780 3080d5c0b9b2ac3936e03d7365d14a5a 311 SUPERFAMILY SSF46785 14 98 1.27E-18 T 01-11-2018 IPR036390 Winged helix DNA-binding domain superfamily CDA09_01780 3080d5c0b9b2ac3936e03d7365d14a5a 311 Gene3D G3DSA:3.40.190.10 121 177 2.7E-16 T 01-11-2018 CDA09_01780 3080d5c0b9b2ac3936e03d7365d14a5a 311 Gene3D G3DSA:1.10.10.10 13 104 1.2E-19 T 01-11-2018 IPR036388 Winged helix-like DNA-binding domain superfamily CDA09_09740 9c0ad80405d9f9d6c5ae4825707f0333 538 Pfam PF06980 Protein of unknown function (DUF1302) 25 538 9.4E-106 T 01-11-2018 IPR010727 Protein of unknown function DUF1302 CDA09_18735 a84a42ec76457443724e2cf45b0acd96 159 Pfam PF03652 Holliday junction resolvase 20 152 9.9E-38 T 01-11-2018 IPR005227 Putative pre-16S rRNA nuclease GO:0006364 CDA09_18735 a84a42ec76457443724e2cf45b0acd96 159 Gene3D G3DSA:3.30.420.140 17 154 1.2E-39 T 01-11-2018 IPR037027 YqgF/RNase H-like domain superfamily GO:0006139 CDA09_18735 a84a42ec76457443724e2cf45b0acd96 159 Hamap MF_00651 Putative pre-16S rRNA nuclease [yqgF]. 19 155 22.699 T 01-11-2018 IPR005227 Putative pre-16S rRNA nuclease GO:0006364 CDA09_18735 a84a42ec76457443724e2cf45b0acd96 159 TIGRFAM TIGR00250 RNAse_H_YqgF: putative transcription antitermination factor YqgF 22 152 2.0E-32 T 01-11-2018 IPR005227 Putative pre-16S rRNA nuclease GO:0006364 CDA09_18735 a84a42ec76457443724e2cf45b0acd96 159 SMART SM00732 19 119 1.0E-19 T 01-11-2018 IPR006641 YqgF/RNase H-like domain GO:0006139 CDA09_18735 a84a42ec76457443724e2cf45b0acd96 159 SUPERFAMILY SSF53098 19 153 4.55E-35 T 01-11-2018 IPR012337 Ribonuclease H-like superfamily CDA09_13180 c401803c9f5025f22506ec038f8e4997 476 SUPERFAMILY SSF55424 353 475 1.24E-41 T 01-11-2018 IPR016156 FAD/NAD-linked reductase, dimerisation domain superfamily GO:0016491|GO:0050660|GO:0055114 CDA09_13180 c401803c9f5025f22506ec038f8e4997 476 ProSitePatterns PS00076 Pyridine nucleotide-disulphide oxidoreductases class-I active site. 49 59 - T 01-11-2018 IPR012999 Pyridine nucleotide-disulphide oxidoreductase, class I, active site GO:0016668|GO:0055114 CDA09_13180 c401803c9f5025f22506ec038f8e4997 476 Pfam PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain 357 466 1.0E-37 T 01-11-2018 IPR004099 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain GO:0045454|GO:0055114 CDA09_13180 c401803c9f5025f22506ec038f8e4997 476 TIGRFAM TIGR01350 lipoamide_DH: dihydrolipoyl dehydrogenase 5 476 4.5E-161 T 01-11-2018 IPR006258 Dihydrolipoamide dehydrogenase GO:0004148|GO:0050660|GO:0055114 KEGG: 00010+1.8.1.4|KEGG: 00020+1.8.1.4|KEGG: 00260+1.8.1.4|KEGG: 00280+1.8.1.4|KEGG: 00620+1.8.1.4|KEGG: 00640+1.8.1.4|MetaCyc: PWY-5046|MetaCyc: PWY-5084|Reactome: R-HSA-204174|Reactome: R-HSA-389661|Reactome: R-HSA-5362517|Reactome: R-HSA-6783984|Reactome: R-HSA-70268|Reactome: R-HSA-70895|Reactome: R-HSA-71064|Reactome: R-HSA-71403 CDA09_13180 c401803c9f5025f22506ec038f8e4997 476 PIRSF PIRSF000350 1 472 1.1E-82 T 01-11-2018 IPR001100 Pyridine nucleotide-disulphide oxidoreductase, class I GO:0009055|GO:0016491 CDA09_13180 c401803c9f5025f22506ec038f8e4997 476 Gene3D G3DSA:3.50.50.60 165 287 7.7E-111 T 01-11-2018 IPR036188 FAD/NAD(P)-binding domain superfamily CDA09_13180 c401803c9f5025f22506ec038f8e4997 476 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 8 27 2.1E-43 T 01-11-2018 CDA09_13180 c401803c9f5025f22506ec038f8e4997 476 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 147 165 2.1E-43 T 01-11-2018 CDA09_13180 c401803c9f5025f22506ec038f8e4997 476 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 186 204 2.1E-43 T 01-11-2018 CDA09_13180 c401803c9f5025f22506ec038f8e4997 476 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 274 290 2.1E-43 T 01-11-2018 CDA09_13180 c401803c9f5025f22506ec038f8e4997 476 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 303 325 2.1E-43 T 01-11-2018 CDA09_13180 c401803c9f5025f22506ec038f8e4997 476 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 6 338 3.1E-71 T 01-11-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 CDA09_13180 c401803c9f5025f22506ec038f8e4997 476 Gene3D G3DSA:3.30.390.30 356 476 5.9E-47 T 01-11-2018 IPR016156 FAD/NAD-linked reductase, dimerisation domain superfamily GO:0016491|GO:0050660|GO:0055114 CDA09_13180 c401803c9f5025f22506ec038f8e4997 476 Gene3D G3DSA:3.50.50.60 6 344 7.7E-111 T 01-11-2018 IPR036188 FAD/NAD(P)-binding domain superfamily CDA09_13180 c401803c9f5025f22506ec038f8e4997 476 SUPERFAMILY SSF51905 2 348 6.94E-63 T 01-11-2018 IPR036188 FAD/NAD(P)-binding domain superfamily CDA09_13180 c401803c9f5025f22506ec038f8e4997 476 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 440 460 4.5E-81 T 01-11-2018 CDA09_13180 c401803c9f5025f22506ec038f8e4997 476 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 150 159 4.5E-81 T 01-11-2018 CDA09_13180 c401803c9f5025f22506ec038f8e4997 476 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 418 433 4.5E-81 T 01-11-2018 CDA09_13180 c401803c9f5025f22506ec038f8e4997 476 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 186 211 4.5E-81 T 01-11-2018 CDA09_13180 c401803c9f5025f22506ec038f8e4997 476 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 7 29 4.5E-81 T 01-11-2018 CDA09_13180 c401803c9f5025f22506ec038f8e4997 476 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 318 325 4.5E-81 T 01-11-2018 CDA09_13180 c401803c9f5025f22506ec038f8e4997 476 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 275 289 4.5E-81 T 01-11-2018 CDA09_13180 c401803c9f5025f22506ec038f8e4997 476 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 48 63 4.5E-81 T 01-11-2018 CDA09_13180 c401803c9f5025f22506ec038f8e4997 476 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 353 374 4.5E-81 T 01-11-2018 CDA09_08180 e35e7645dd530b26b9c98fe677899e47 145 Gene3D G3DSA:1.10.10.10 1 140 1.3E-37 T 01-11-2018 IPR036388 Winged helix-like DNA-binding domain superfamily CDA09_08180 e35e7645dd530b26b9c98fe677899e47 145 SUPERFAMILY SSF46785 3 133 7.69E-36 T 01-11-2018 IPR036390 Winged helix DNA-binding domain superfamily CDA09_08180 e35e7645dd530b26b9c98fe677899e47 145 Pfam PF02082 Transcriptional regulator 1 81 4.4E-24 T 01-11-2018 IPR000944 Transcription regulator Rrf2-type CDA09_08180 e35e7645dd530b26b9c98fe677899e47 145 TIGRFAM TIGR00738 rrf2_super: Rrf2 family protein 1 130 1.2E-36 T 01-11-2018 IPR000944 Transcription regulator Rrf2-type CDA09_22890 57507ca1d5bf48d2ea14a71f320f7f44 84 SUPERFAMILY SSF159127 1 70 1.7E-23 T 01-11-2018 IPR037254 HupF/HypC superfamily CDA09_22890 57507ca1d5bf48d2ea14a71f320f7f44 84 Pfam PF01455 HupF/HypC family 1 66 6.1E-27 T 01-11-2018 IPR001109 Hydrogenase expression/formation protein, HupF/HypC CDA09_22890 57507ca1d5bf48d2ea14a71f320f7f44 84 Gene3D G3DSA:2.40.50.970 1 73 2.3E-27 T 01-11-2018 IPR037254 HupF/HypC superfamily CDA09_22890 57507ca1d5bf48d2ea14a71f320f7f44 84 ProSitePatterns PS01097 Hydrogenases expression/synthesis hupF/hypC family signature. 1 9 - T 01-11-2018 IPR019812 Hydrogenase assembly chaperone, conserved site CDA09_22890 57507ca1d5bf48d2ea14a71f320f7f44 84 TIGRFAM TIGR00074 hypC_hupF: hydrogenase assembly chaperone HypC/HupF 1 68 7.4E-23 T 01-11-2018 IPR001109 Hydrogenase expression/formation protein, HupF/HypC CDA09_22890 57507ca1d5bf48d2ea14a71f320f7f44 84 PRINTS PR00445 HupF/HypC hydrogenase expression/synthesis family signature 39 55 5.1E-20 T 01-11-2018 IPR001109 Hydrogenase expression/formation protein, HupF/HypC CDA09_22890 57507ca1d5bf48d2ea14a71f320f7f44 84 PRINTS PR00445 HupF/HypC hydrogenase expression/synthesis family signature 2 9 5.1E-20 T 01-11-2018 IPR001109 Hydrogenase expression/formation protein, HupF/HypC CDA09_22890 57507ca1d5bf48d2ea14a71f320f7f44 84 PRINTS PR00445 HupF/HypC hydrogenase expression/synthesis family signature 57 69 5.1E-20 T 01-11-2018 IPR001109 Hydrogenase expression/formation protein, HupF/HypC CDA09_22890 57507ca1d5bf48d2ea14a71f320f7f44 84 PRINTS PR00445 HupF/HypC hydrogenase expression/synthesis family signature 18 34 5.1E-20 T 01-11-2018 IPR001109 Hydrogenase expression/formation protein, HupF/HypC CDA09_00090 6553386cb6870c696a6e24938298b170 197 Pfam PF01814 Hemerythrin HHE cation binding domain 62 176 1.2E-9 T 01-11-2018 IPR012312 Haemerythrin-like Reactome: R-HSA-390471|Reactome: R-HSA-8951664|Reactome: R-HSA-917937|Reactome: R-HSA-983168 CDA09_00090 6553386cb6870c696a6e24938298b170 197 SUPERFAMILY SSF47188 51 176 3.53E-25 T 01-11-2018 IPR035938 Hemerythrin-like superfamily CDA09_00090 6553386cb6870c696a6e24938298b170 197 TIGRFAM TIGR02481 hemeryth_dom: hemerythrin-like metal-binding domain 53 176 3.1E-25 T 01-11-2018 IPR012827 Haemerythrin, metal-binding domain GO:0046872 CDA09_00090 6553386cb6870c696a6e24938298b170 197 ProSitePatterns PS00550 Hemerythrin family signature. 105 128 - T 01-11-2018 IPR016131 Haemerythrin, iron-binding site GO:0046872 CDA09_00090 6553386cb6870c696a6e24938298b170 197 Gene3D G3DSA:1.20.120.50 46 180 1.4E-25 T 01-11-2018 IPR035938 Hemerythrin-like superfamily CDA09_01345 a72d8f777edb65b1f613878b45e479e6 103 PRINTS PR00605 Class IC cytochrome C signature 76 98 2.0E-6 T 01-11-2018 IPR008168 Cytochrome c, class IC GO:0005506|GO:0009055 CDA09_01345 a72d8f777edb65b1f613878b45e479e6 103 PRINTS PR00605 Class IC cytochrome C signature 35 46 2.0E-6 T 01-11-2018 IPR008168 Cytochrome c, class IC GO:0005506|GO:0009055 CDA09_01345 a72d8f777edb65b1f613878b45e479e6 103 SUPERFAMILY SSF46626 5 102 1.35E-22 T 01-11-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 CDA09_01345 a72d8f777edb65b1f613878b45e479e6 103 Pfam PF13442 Cytochrome C oxidase, cbb3-type, subunit III 25 98 1.6E-14 T 01-11-2018 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 Reactome: R-HSA-111457|Reactome: R-HSA-111458|Reactome: R-HSA-111459|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 CDA09_01345 a72d8f777edb65b1f613878b45e479e6 103 Gene3D G3DSA:1.10.760.10 5 103 2.3E-19 T 01-11-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 CDA09_13620 f093b06f03a2a853a1fe54ccedc30669 233 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 31 44 8.8E-6 T 01-11-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 CDA09_13620 f093b06f03a2a853a1fe54ccedc30669 233 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 52 75 8.8E-6 T 01-11-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 CDA09_13620 f093b06f03a2a853a1fe54ccedc30669 233 Pfam PF00440 Bacterial regulatory proteins, tetR family 31 76 6.9E-10 T 01-11-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 CDA09_13620 f093b06f03a2a853a1fe54ccedc30669 233 Gene3D G3DSA:1.10.357.10 20 223 4.8E-26 T 01-11-2018 CDA09_13620 f093b06f03a2a853a1fe54ccedc30669 233 SUPERFAMILY SSF46689 19 92 4.4E-15 T 01-11-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 CDA09_03920 9c925a3982456c4545a951b25a278b3c 284 Gene3D G3DSA:2.30.30.100 235 284 8.7E-14 T 01-11-2018 CDA09_03920 9c925a3982456c4545a951b25a278b3c 284 SUPERFAMILY SSF50037 236 281 5.04E-9 T 01-11-2018 IPR008988 Transcriptional repressor, C-terminal CDA09_03920 9c925a3982456c4545a951b25a278b3c 284 TIGRFAM TIGR00121 birA_ligase: biotin--[acetyl-CoA-carboxylase] ligase 43 281 1.2E-52 T 01-11-2018 IPR004408 Biotin--acetyl-CoA-carboxylase ligase GO:0004077|GO:0006464 KEGG: 00780+6.3.4.15|Reactome: R-HSA-196780|Reactome: R-HSA-3371599 CDA09_03920 9c925a3982456c4545a951b25a278b3c 284 Pfam PF02237 Biotin protein ligase C terminal domain 239 281 4.8E-9 T 01-11-2018 IPR003142 Biotin protein ligase, C-terminal GO:0006464 KEGG: 00780+6.3.4.15|Reactome: R-HSA-196780|Reactome: R-HSA-3371599 CDA09_03920 9c925a3982456c4545a951b25a278b3c 284 SUPERFAMILY SSF55681 30 232 1.82E-52 T 01-11-2018 CDA09_03920 9c925a3982456c4545a951b25a278b3c 284 Pfam PF03099 Biotin/lipoate A/B protein ligase family 69 171 1.8E-14 T 01-11-2018 IPR004143 Biotinyl protein ligase (BPL) and lipoyl protein ligase (LPL), catalytic domain GO:0006464 KEGG: 00785+2.3.1.181|MetaCyc: PWY-6987|MetaCyc: PWY-7382 CDA09_03920 9c925a3982456c4545a951b25a278b3c 284 Gene3D G3DSA:3.30.930.10 28 234 3.1E-56 T 01-11-2018 CDA09_03215 21f2c37c8b5850b43ae197c0de97075a 292 PIRSF PIRSF036480 9 292 1.4E-94 T 01-11-2018 CDA09_03215 21f2c37c8b5850b43ae197c0de97075a 292 SUPERFAMILY SSF53328 96 290 7.06E-55 T 01-11-2018 IPR036477 Formyl transferase, N-terminal domain superfamily GO:0009058|GO:0016742 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 CDA09_03215 21f2c37c8b5850b43ae197c0de97075a 292 PRINTS PR01575 Formyltetrahydrofolate deformylase signature 13 39 1.1E-37 T 01-11-2018 IPR004810 Formyltetrahydrofolate deformylase GO:0006189|GO:0008864 KEGG: 00630+3.5.1.10|KEGG: 00670+3.5.1.10|MetaCyc: PWY-2201|MetaCyc: PWY-5497|MetaCyc: PWY-7909 CDA09_03215 21f2c37c8b5850b43ae197c0de97075a 292 PRINTS PR01575 Formyltetrahydrofolate deformylase signature 45 57 1.1E-37 T 01-11-2018 IPR004810 Formyltetrahydrofolate deformylase GO:0006189|GO:0008864 KEGG: 00630+3.5.1.10|KEGG: 00670+3.5.1.10|MetaCyc: PWY-2201|MetaCyc: PWY-5497|MetaCyc: PWY-7909 CDA09_03215 21f2c37c8b5850b43ae197c0de97075a 292 PRINTS PR01575 Formyltetrahydrofolate deformylase signature 243 265 1.1E-37 T 01-11-2018 IPR004810 Formyltetrahydrofolate deformylase GO:0006189|GO:0008864 KEGG: 00630+3.5.1.10|KEGG: 00670+3.5.1.10|MetaCyc: PWY-2201|MetaCyc: PWY-5497|MetaCyc: PWY-7909 CDA09_03215 21f2c37c8b5850b43ae197c0de97075a 292 PRINTS PR01575 Formyltetrahydrofolate deformylase signature 119 146 1.1E-37 T 01-11-2018 IPR004810 Formyltetrahydrofolate deformylase GO:0006189|GO:0008864 KEGG: 00630+3.5.1.10|KEGG: 00670+3.5.1.10|MetaCyc: PWY-2201|MetaCyc: PWY-5497|MetaCyc: PWY-7909 CDA09_03215 21f2c37c8b5850b43ae197c0de97075a 292 PRINTS PR01575 Formyltetrahydrofolate deformylase signature 97 119 1.1E-37 T 01-11-2018 IPR004810 Formyltetrahydrofolate deformylase GO:0006189|GO:0008864 KEGG: 00630+3.5.1.10|KEGG: 00670+3.5.1.10|MetaCyc: PWY-2201|MetaCyc: PWY-5497|MetaCyc: PWY-7909 CDA09_03215 21f2c37c8b5850b43ae197c0de97075a 292 PRINTS PR01575 Formyltetrahydrofolate deformylase signature 265 290 1.1E-37 T 01-11-2018 IPR004810 Formyltetrahydrofolate deformylase GO:0006189|GO:0008864 KEGG: 00630+3.5.1.10|KEGG: 00670+3.5.1.10|MetaCyc: PWY-2201|MetaCyc: PWY-5497|MetaCyc: PWY-7909 CDA09_03215 21f2c37c8b5850b43ae197c0de97075a 292 Gene3D G3DSA:3.40.50.170 96 291 6.3E-67 T 01-11-2018 CDA09_03215 21f2c37c8b5850b43ae197c0de97075a 292 Pfam PF00551 Formyl transferase 96 271 6.1E-33 T 01-11-2018 IPR002376 Formyl transferase, N-terminal GO:0009058|GO:0016742 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 CDA09_03215 21f2c37c8b5850b43ae197c0de97075a 292 Gene3D G3DSA:3.30.70.260 2 93 3.3E-10 T 01-11-2018 CDA09_03215 21f2c37c8b5850b43ae197c0de97075a 292 Hamap MF_01927 Formyltetrahydrofolate deformylase [purU]. 8 291 41.018 T 01-11-2018 IPR004810 Formyltetrahydrofolate deformylase GO:0006189|GO:0008864 KEGG: 00630+3.5.1.10|KEGG: 00670+3.5.1.10|MetaCyc: PWY-2201|MetaCyc: PWY-5497|MetaCyc: PWY-7909 CDA09_09980 786cb4f2da598271b73e1547ef00d385 402 Gene3D G3DSA:3.40.50.10540 5 395 2.8E-108 T 01-11-2018 IPR023606 CoA-transferase family III domain superfamily CDA09_09980 786cb4f2da598271b73e1547ef00d385 402 Gene3D G3DSA:3.30.1540.10 234 327 2.8E-108 T 01-11-2018 CDA09_09980 786cb4f2da598271b73e1547ef00d385 402 Pfam PF02515 CoA-transferase family III 5 377 2.9E-108 T 01-11-2018 IPR003673 CoA-transferase family III GO:0003824 CDA09_09980 786cb4f2da598271b73e1547ef00d385 402 SUPERFAMILY SSF89796 3 401 1.31E-107 T 01-11-2018 IPR023606 CoA-transferase family III domain superfamily CDA09_00240 6e1794da518c383d35e52b2dbf27d7d0 382 Gene3D G3DSA:3.50.50.60 7 282 3.3E-63 T 01-11-2018 IPR036188 FAD/NAD(P)-binding domain superfamily CDA09_00240 6e1794da518c383d35e52b2dbf27d7d0 382 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 274 281 3.5E-12 T 01-11-2018 CDA09_00240 6e1794da518c383d35e52b2dbf27d7d0 382 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 235 249 3.5E-12 T 01-11-2018 CDA09_00240 6e1794da518c383d35e52b2dbf27d7d0 382 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 149 174 3.5E-12 T 01-11-2018 CDA09_00240 6e1794da518c383d35e52b2dbf27d7d0 382 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 4 26 3.5E-12 T 01-11-2018 CDA09_00240 6e1794da518c383d35e52b2dbf27d7d0 382 SUPERFAMILY SSF51905 5 305 1.46E-24 T 01-11-2018 IPR036188 FAD/NAD(P)-binding domain superfamily CDA09_00240 6e1794da518c383d35e52b2dbf27d7d0 382 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 103 121 1.3E-19 T 01-11-2018 CDA09_00240 6e1794da518c383d35e52b2dbf27d7d0 382 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 259 281 1.3E-19 T 01-11-2018 CDA09_00240 6e1794da518c383d35e52b2dbf27d7d0 382 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 5 24 1.3E-19 T 01-11-2018 CDA09_00240 6e1794da518c383d35e52b2dbf27d7d0 382 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 149 167 1.3E-19 T 01-11-2018 CDA09_00240 6e1794da518c383d35e52b2dbf27d7d0 382 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 234 250 1.3E-19 T 01-11-2018 CDA09_00240 6e1794da518c383d35e52b2dbf27d7d0 382 Gene3D G3DSA:3.50.50.60 111 246 3.3E-63 T 01-11-2018 IPR036188 FAD/NAD(P)-binding domain superfamily CDA09_00240 6e1794da518c383d35e52b2dbf27d7d0 382 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 5 281 1.7E-43 T 01-11-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 CDA09_00240 6e1794da518c383d35e52b2dbf27d7d0 382 Gene3D G3DSA:3.30.390.120 323 379 8.4E-12 T 01-11-2018 CDA09_10525 ccfe9b07b9abce5d7feea26ae7071d43 746 SUPERFAMILY SSF56003 347 743 4.06E-108 T 01-11-2018 IPR037165 Aldehyde oxidase/xanthine dehydrogenase, molybdopterin binding domain superfamily GO:0016491|GO:0055114 CDA09_10525 ccfe9b07b9abce5d7feea26ae7071d43 746 TIGRFAM TIGR01409 TAT_signal_seq: Tat (twin-arginine translocation) pathway signal sequence 30 52 4.7E-4 T 01-11-2018 IPR019546 Twin-arginine translocation pathway, signal sequence, bacterial/archaeal CDA09_10525 ccfe9b07b9abce5d7feea26ae7071d43 746 Gene3D G3DSA:3.30.365.10 347 574 2.0E-54 T 01-11-2018 CDA09_10525 ccfe9b07b9abce5d7feea26ae7071d43 746 PIRSF PIRSF036389 23 746 2.2E-228 T 01-11-2018 IPR012368 Oxidoreductase molybdopterin-binding subunit, IorB-related CDA09_10525 ccfe9b07b9abce5d7feea26ae7071d43 746 SMART SM01008 232 315 1.0E-12 T 01-11-2018 IPR000674 Aldehyde oxidase/xanthine dehydrogenase, a/b hammerhead CDA09_10525 ccfe9b07b9abce5d7feea26ae7071d43 746 Gene3D G3DSA:3.90.1170.50 206 286 1.9E-7 T 01-11-2018 CDA09_10525 ccfe9b07b9abce5d7feea26ae7071d43 746 Gene3D G3DSA:3.30.365.10 64 205 2.2E-20 T 01-11-2018 CDA09_10525 ccfe9b07b9abce5d7feea26ae7071d43 746 Pfam PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase 617 698 1.7E-6 T 01-11-2018 IPR008274 Aldehyde oxidase/xanthine dehydrogenase, molybdopterin binding GO:0016491|GO:0055114 CDA09_10525 ccfe9b07b9abce5d7feea26ae7071d43 746 Pfam PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase 347 575 1.5E-29 T 01-11-2018 IPR008274 Aldehyde oxidase/xanthine dehydrogenase, molybdopterin binding GO:0016491|GO:0055114 CDA09_10525 ccfe9b07b9abce5d7feea26ae7071d43 746 Pfam PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase 55 202 9.5E-12 T 01-11-2018 IPR008274 Aldehyde oxidase/xanthine dehydrogenase, molybdopterin binding GO:0016491|GO:0055114 CDA09_10525 ccfe9b07b9abce5d7feea26ae7071d43 746 Gene3D G3DSA:3.30.365.10 603 746 8.4E-27 T 01-11-2018 CDA09_10525 ccfe9b07b9abce5d7feea26ae7071d43 746 Gene3D G3DSA:3.30.365.10 365 463 2.0E-54 T 01-11-2018 CDA09_10525 ccfe9b07b9abce5d7feea26ae7071d43 746 SUPERFAMILY SSF56003 67 265 7.32E-39 T 01-11-2018 IPR037165 Aldehyde oxidase/xanthine dehydrogenase, molybdopterin binding domain superfamily GO:0016491|GO:0055114 CDA09_06715 4174842fe3d498b83d9396b53fa1f9d1 134 Pfam PF06429 Flagellar basal body rod FlgEFG protein C-terminal 84 132 1.2E-16 T 01-11-2018 IPR010930 Flagellar basal-body/hook protein, C-terminal domain CDA09_06715 4174842fe3d498b83d9396b53fa1f9d1 134 TIGRFAM TIGR01395 FlgC: flagellar basal-body rod protein FlgC 4 134 4.7E-49 T 01-11-2018 IPR006299 Flagellar basal-body rod protein FlgC GO:0030694|GO:0071973 CDA09_06715 4174842fe3d498b83d9396b53fa1f9d1 134 Pfam PF00460 Flagella basal body rod protein 9 36 7.7E-8 T 01-11-2018 IPR001444 Flagellar basal body rod protein, N-terminal GO:0071973 CDA09_06715 4174842fe3d498b83d9396b53fa1f9d1 134 ProSitePatterns PS00588 Flagella basal body rod proteins signature. 13 33 - T 01-11-2018 IPR019776 Flagellar basal body rod protein, conserved site CDA09_22070 b40329736a9513902882b1712be041f1 191 TIGRFAM TIGR03748 conj_PilL: integrating conjugative element protein PilL, PFGI-1 class 54 156 2.0E-39 T 01-11-2018 IPR022260 Integrating conjugative element protein PilL, PFGI-1 CDA09_19795 4f2d43ef206a7d73fc06f05e6c5125ad 363 Pfam PF12833 Helix-turn-helix domain 275 353 2.1E-17 T 01-11-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 CDA09_19795 4f2d43ef206a7d73fc06f05e6c5125ad 363 SUPERFAMILY SSF46689 304 357 3.32E-10 T 01-11-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 CDA09_19795 4f2d43ef206a7d73fc06f05e6c5125ad 363 Pfam PF12625 Arabinose-binding domain of AraC transcription regulator, N-term 38 226 1.5E-36 T 01-11-2018 IPR032687 HTH-type transcriptional regulator AraC-type, N-terminal CDA09_19795 4f2d43ef206a7d73fc06f05e6c5125ad 363 SMART SM00342 269 351 7.6E-21 T 01-11-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 CDA09_19795 4f2d43ef206a7d73fc06f05e6c5125ad 363 Gene3D G3DSA:1.10.10.60 249 361 1.1E-23 T 01-11-2018 CDA09_15015 376bbea7cc4d32c60b61a736dee7e73c 404 SUPERFAMILY SSF53649 61 400 2.45E-40 T 01-11-2018 IPR017850 Alkaline-phosphatase-like, core domain superfamily GO:0003824 CDA09_15015 376bbea7cc4d32c60b61a736dee7e73c 404 Pfam PF01663 Type I phosphodiesterase / nucleotide pyrophosphatase 66 294 5.3E-18 T 01-11-2018 IPR002591 Type I phosphodiesterase/nucleotide pyrophosphatase/phosphate transferase GO:0003824 CDA09_15015 376bbea7cc4d32c60b61a736dee7e73c 404 Gene3D G3DSA:3.40.720.10 54 401 7.3E-35 T 01-11-2018 IPR017849 Alkaline phosphatase-like, alpha/beta/alpha GO:0003824 CDA09_12835 549c57bb26475d34aab78c430f57fd4f 190 Hamap MF_01940 RNA 2',3'-cyclic phosphodiesterase [thpR]. 15 184 19.326 T 01-11-2018 IPR004175 RNA 2',3'-cyclic phosphodiesterase GO:0004113|GO:0008664 CDA09_12835 549c57bb26475d34aab78c430f57fd4f 190 TIGRFAM TIGR02258 2_5_ligase: 2'-5' RNA ligase 15 182 6.7E-34 T 01-11-2018 IPR004175 RNA 2',3'-cyclic phosphodiesterase GO:0004113|GO:0008664 CDA09_12835 549c57bb26475d34aab78c430f57fd4f 190 Pfam PF02834 LigT like Phosphoesterase 107 164 4.2E-5 T 01-11-2018 IPR014051 Phosphoesterase, HXTX CDA09_12835 549c57bb26475d34aab78c430f57fd4f 190 Pfam PF02834 LigT like Phosphoesterase 28 98 2.9E-12 T 01-11-2018 IPR014051 Phosphoesterase, HXTX CDA09_12835 549c57bb26475d34aab78c430f57fd4f 190 SUPERFAMILY SSF55144 15 183 2.46E-39 T 01-11-2018 IPR009097 Cyclic phosphodiesterase CDA09_12835 549c57bb26475d34aab78c430f57fd4f 190 Gene3D G3DSA:3.90.1140.10 11 184 6.7E-44 T 01-11-2018 CDA09_22735 a80c7617d422eb1efc26c392dc866170 555 SUPERFAMILY SSF52096 307 545 7.46E-15 T 01-11-2018 IPR029045 ClpP/crotonase-like domain superfamily CDA09_22735 a80c7617d422eb1efc26c392dc866170 555 Gene3D G3DSA:3.90.226.10 264 490 0.0 T 01-11-2018 CDA09_22735 a80c7617d422eb1efc26c392dc866170 555 Gene3D G3DSA:3.90.226.10 13 555 0.0 T 01-11-2018 CDA09_22735 a80c7617d422eb1efc26c392dc866170 555 TIGRFAM TIGR03222 benzo_boxC: benzoyl-CoA-dihydrodiol lyase 13 555 0.0 T 01-11-2018 IPR017633 Benzoyl-CoA-dihydrodiol lyase KEGG: 00362+4.1.2.44|MetaCyc: PWY-1361 CDA09_22735 a80c7617d422eb1efc26c392dc866170 555 Pfam PF00378 Enoyl-CoA hydratase/isomerase 54 242 2.3E-21 T 01-11-2018 IPR001753 Enoyl-CoA hydratase/isomerase GO:0003824 CDA09_22735 a80c7617d422eb1efc26c392dc866170 555 SUPERFAMILY SSF52096 21 242 1.03E-30 T 01-11-2018 IPR029045 ClpP/crotonase-like domain superfamily CDA09_15765 c1a53295b4d21e0e3da60e8a43c4ec20 640 PIRSF PIRSF000549 1 640 1.3E-290 T 01-11-2018 IPR016230 Serine-protein kinase, PrkA GO:0004672 CDA09_15765 c1a53295b4d21e0e3da60e8a43c4ec20 640 SMART SM00763 19 376 5.9E-218 T 01-11-2018 IPR013153 PrkA AAA domain CDA09_15765 c1a53295b4d21e0e3da60e8a43c4ec20 640 Pfam PF08298 PrkA AAA domain 19 376 3.7E-173 T 01-11-2018 IPR013153 PrkA AAA domain CDA09_15765 c1a53295b4d21e0e3da60e8a43c4ec20 640 Pfam PF06798 PrkA serine protein kinase C-terminal domain 379 632 1.1E-74 T 01-11-2018 IPR010650 PrkA C-terminal domain CDA09_15765 c1a53295b4d21e0e3da60e8a43c4ec20 640 SUPERFAMILY SSF52540 75 342 1.64E-18 T 01-11-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CDA09_15575 3b46997a5a2544d99e640e9de544a0db 515 SUPERFAMILY SSF55103 243 513 2.83E-49 T 01-11-2018 IPR016164 FAD-linked oxidase-like, C-terminal GO:0003824|GO:0050660 CDA09_15575 3b46997a5a2544d99e640e9de544a0db 515 Gene3D G3DSA:1.10.45.10 472 515 8.6E-22 T 01-11-2018 IPR016171 Vanillyl-alcohol oxidase, C-terminal subdomain 2 CDA09_15575 3b46997a5a2544d99e640e9de544a0db 515 SUPERFAMILY SSF56176 10 241 1.12E-58 T 01-11-2018 IPR036318 FAD-binding, type PCMH-like superfamily GO:0050660 CDA09_15575 3b46997a5a2544d99e640e9de544a0db 515 Gene3D G3DSA:3.40.462.10 242 471 2.0E-80 T 01-11-2018 IPR016170 Cytokinin dehydrogenase, C-terminal domain superfamily KEGG: 00908+1.5.99.12 CDA09_15575 3b46997a5a2544d99e640e9de544a0db 515 Gene3D G3DSA:3.30.43.10 2 113 2.4E-35 T 01-11-2018 IPR016167 FAD-binding, type PCMH, subdomain 1 CDA09_15575 3b46997a5a2544d99e640e9de544a0db 515 Pfam PF02913 FAD linked oxidases, C-terminal domain 306 510 4.3E-12 T 01-11-2018 IPR004113 FAD-linked oxidase, C-terminal GO:0003824|GO:0050660 CDA09_15575 3b46997a5a2544d99e640e9de544a0db 515 Gene3D G3DSA:3.30.465.10 114 241 1.4E-58 T 01-11-2018 IPR016169 FAD-binding, type PCMH, subdomain 2 CDA09_15575 3b46997a5a2544d99e640e9de544a0db 515 Pfam PF01565 FAD binding domain 60 197 3.8E-27 T 01-11-2018 IPR006094 FAD linked oxidase, N-terminal GO:0016491|GO:0050660|GO:0055114 CDA09_20855 7d49d8667558ca5f781c8b9aa561c29d 161 SUPERFAMILY SSF55804 4 149 4.19E-44 T 01-11-2018 IPR016152 Phosphotransferase/anion transporter Reactome: R-HSA-425381 CDA09_20855 7d49d8667558ca5f781c8b9aa561c29d 161 TIGRFAM TIGR01419 nitro_reg_IIA: PTS IIA-like nitrogen-regulatory protein PtsN 4 146 7.1E-47 T 01-11-2018 IPR006320 Phosphotransferase system, IIA-like nitrogen-regulatory protein PtsN GO:0008982|GO:0009401 CDA09_20855 7d49d8667558ca5f781c8b9aa561c29d 161 Pfam PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 7 147 1.5E-35 T 01-11-2018 IPR002178 PTS EIIA type-2 domain CDA09_20855 7d49d8667558ca5f781c8b9aa561c29d 161 ProSitePatterns PS00372 PTS EIIA domains phosphorylation site signature 2. 52 68 - T 01-11-2018 IPR002178 PTS EIIA type-2 domain CDA09_20855 7d49d8667558ca5f781c8b9aa561c29d 161 Gene3D G3DSA:3.40.930.10 1 151 1.4E-54 T 01-11-2018 IPR016152 Phosphotransferase/anion transporter Reactome: R-HSA-425381 CDA09_19225 a35bd242f77ba0d222f46b26aeaf6ef1 385 Gene3D G3DSA:3.40.640.10 45 283 7.5E-130 T 01-11-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 CDA09_19225 a35bd242f77ba0d222f46b26aeaf6ef1 385 SUPERFAMILY SSF53383 8 385 1.32E-101 T 01-11-2018 IPR015424 Pyridoxal phosphate-dependent transferase CDA09_19225 a35bd242f77ba0d222f46b26aeaf6ef1 385 Gene3D G3DSA:3.90.1150.10 21 382 7.5E-130 T 01-11-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 CDA09_19225 a35bd242f77ba0d222f46b26aeaf6ef1 385 Pfam PF00155 Aminotransferase class I and II 33 382 6.7E-59 T 01-11-2018 IPR004839 Aminotransferase, class I/classII GO:0009058|GO:0030170 CDA09_18450 5dcb6085fb8be2a58a643d52ba58c39d 406 Pfam PF00005 ABC transporter 41 173 1.5E-20 T 01-11-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 CDA09_18450 5dcb6085fb8be2a58a643d52ba58c39d 406 Gene3D G3DSA:3.40.50.300 27 252 3.2E-46 T 01-11-2018 CDA09_18450 5dcb6085fb8be2a58a643d52ba58c39d 406 SMART SM00382 50 222 1.9E-10 T 01-11-2018 IPR003593 AAA+ ATPase domain CDA09_18450 5dcb6085fb8be2a58a643d52ba58c39d 406 Gene3D G3DSA:2.70.50.60 256 394 2.8E-15 T 01-11-2018 CDA09_18450 5dcb6085fb8be2a58a643d52ba58c39d 406 ProSitePatterns PS00211 ABC transporters family signature. 146 160 - T 01-11-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 CDA09_18450 5dcb6085fb8be2a58a643d52ba58c39d 406 Pfam PF14524 Wzt C-terminal domain 260 398 1.9E-33 T 01-11-2018 IPR029439 Wzt, C-terminal CDA09_18450 5dcb6085fb8be2a58a643d52ba58c39d 406 SUPERFAMILY SSF52540 38 234 9.24E-49 T 01-11-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CDA09_21005 f8a7b6df56067498472032983a74448c 79 Pfam PF10932 Protein of unknown function (DUF2783) 3 71 4.4E-29 T 01-11-2018 IPR021233 Protein of unknown function DUF2783 CDA09_10790 a4bd9120f271c7aa6e9e33e7bf30dad6 261 SMART SM00382 35 228 3.9E-9 T 01-11-2018 IPR003593 AAA+ ATPase domain CDA09_10790 a4bd9120f271c7aa6e9e33e7bf30dad6 261 Pfam PF00005 ABC transporter 28 181 1.7E-30 T 01-11-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 CDA09_10790 a4bd9120f271c7aa6e9e33e7bf30dad6 261 SUPERFAMILY SSF52540 8 255 3.36E-57 T 01-11-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CDA09_10790 a4bd9120f271c7aa6e9e33e7bf30dad6 261 Gene3D G3DSA:3.40.50.300 9 260 1.5E-66 T 01-11-2018 CDA09_10790 a4bd9120f271c7aa6e9e33e7bf30dad6 261 ProSitePatterns PS00211 ABC transporters family signature. 154 168 - T 01-11-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 CDA09_09225 d1102d998699840ba8fa57c33a8907c7 398 Gene3D G3DSA:2.40.110.10 125 234 1.3E-39 T 01-11-2018 CDA09_09225 d1102d998699840ba8fa57c33a8907c7 398 SUPERFAMILY SSF56645 2 244 4.06E-79 T 01-11-2018 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain superfamily GO:0016627|GO:0055114 CDA09_09225 d1102d998699840ba8fa57c33a8907c7 398 Pfam PF02771 Acyl-CoA dehydrogenase, N-terminal domain 7 119 1.3E-24 T 01-11-2018 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal GO:0016627|GO:0050660|GO:0055114 CDA09_09225 d1102d998699840ba8fa57c33a8907c7 398 SUPERFAMILY SSF47203 231 398 9.49E-23 T 01-11-2018 IPR036250 Acyl-CoA dehydrogenase-like, C-terminal GO:0016627|GO:0055114 CDA09_09225 d1102d998699840ba8fa57c33a8907c7 398 Gene3D G3DSA:1.20.140.10 235 398 2.8E-38 T 01-11-2018 CDA09_09225 d1102d998699840ba8fa57c33a8907c7 398 Pfam PF02770 Acyl-CoA dehydrogenase, middle domain 125 217 7.3E-22 T 01-11-2018 IPR006091 Acyl-CoA oxidase/dehydrogenase, central domain GO:0016627|GO:0055114 CDA09_09225 d1102d998699840ba8fa57c33a8907c7 398 Gene3D G3DSA:1.10.540.10 2 119 9.1E-30 T 01-11-2018 IPR037069 Acyl-CoA dehydrogenase/oxidase, N-terminal domain superfamily GO:0016627|GO:0050660|GO:0055114 CDA09_09225 d1102d998699840ba8fa57c33a8907c7 398 Pfam PF00441 Acyl-CoA dehydrogenase, C-terminal domain 231 395 5.6E-21 T 01-11-2018 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal GO:0016627|GO:0055114 CDA09_21810 46b4c90f1c8361a61fce3b6d71da6167 273 TIGRFAM TIGR00241 CoA_E_activ: putative CoA-substrate-specific enzyme activase 3 255 2.2E-61 T 01-11-2018 IPR008275 CoA enzyme activase CDA09_21810 46b4c90f1c8361a61fce3b6d71da6167 273 Pfam PF01869 BadF/BadG/BcrA/BcrD ATPase family 5 255 1.1E-43 T 01-11-2018 IPR002731 ATPase, BadF/BadG/BcrA/BcrD type Reactome: R-HSA-446210 CDA09_21810 46b4c90f1c8361a61fce3b6d71da6167 273 SUPERFAMILY SSF53067 3 259 1.16E-32 T 01-11-2018 CDA09_21810 46b4c90f1c8361a61fce3b6d71da6167 273 Gene3D G3DSA:3.30.420.40 5 255 8.6E-66 T 01-11-2018 CDA09_21810 46b4c90f1c8361a61fce3b6d71da6167 273 Gene3D G3DSA:3.30.420.40 97 237 8.6E-66 T 01-11-2018 CDA09_19765 c55bc7558907c6958f28796f9689b5a0 217 SUPERFAMILY SSF46894 133 212 3.3E-17 T 01-11-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 CDA09_19765 c55bc7558907c6958f28796f9689b5a0 217 Pfam PF00072 Response regulator receiver domain 6 118 1.0E-30 T 01-11-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 CDA09_19765 c55bc7558907c6958f28796f9689b5a0 217 SUPERFAMILY SSF52172 3 133 1.57E-36 T 01-11-2018 IPR011006 CheY-like superfamily CDA09_19765 c55bc7558907c6958f28796f9689b5a0 217 SMART SM00448 4 117 7.0E-32 T 01-11-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 CDA09_19765 c55bc7558907c6958f28796f9689b5a0 217 SMART SM00421 149 206 2.6E-15 T 01-11-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 CDA09_19765 c55bc7558907c6958f28796f9689b5a0 217 Gene3D G3DSA:3.40.50.12740 4 212 9.8E-61 T 01-11-2018 CDA09_19765 c55bc7558907c6958f28796f9689b5a0 217 Pfam PF00196 Bacterial regulatory proteins, luxR family 151 206 1.6E-14 T 01-11-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 CDA09_19765 c55bc7558907c6958f28796f9689b5a0 217 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 182 194 6.6E-9 T 01-11-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 CDA09_19765 c55bc7558907c6958f28796f9689b5a0 217 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 152 166 6.6E-9 T 01-11-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 CDA09_19765 c55bc7558907c6958f28796f9689b5a0 217 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 166 182 6.6E-9 T 01-11-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 CDA09_12995 251a00421800775a08a3ad57a197f5a0 107 SUPERFAMILY SSF54862 1 100 1.97E-25 T 01-11-2018 CDA09_12995 251a00421800775a08a3ad57a197f5a0 107 PRINTS PR00354 7Fe ferredoxin signature 35 52 1.7E-12 T 01-11-2018 IPR000813 7Fe ferredoxin GO:0009055 CDA09_12995 251a00421800775a08a3ad57a197f5a0 107 PRINTS PR00354 7Fe ferredoxin signature 19 29 1.7E-12 T 01-11-2018 IPR000813 7Fe ferredoxin GO:0009055 CDA09_12995 251a00421800775a08a3ad57a197f5a0 107 PRINTS PR00354 7Fe ferredoxin signature 9 19 1.7E-12 T 01-11-2018 IPR000813 7Fe ferredoxin GO:0009055 CDA09_12995 251a00421800775a08a3ad57a197f5a0 107 Gene3D G3DSA:3.30.70.20 2 101 3.5E-29 T 01-11-2018 CDA09_12995 251a00421800775a08a3ad57a197f5a0 107 Pfam PF11953 Domain of unknown function (DUF3470) 66 107 1.1E-13 T 01-11-2018 IPR022569 Ferredoxin, C-terminal CDA09_12995 251a00421800775a08a3ad57a197f5a0 107 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 40 51 - T 01-11-2018 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site CDA09_12995 251a00421800775a08a3ad57a197f5a0 107 Pfam PF00037 4Fe-4S binding domain 34 56 1.2E-7 T 01-11-2018 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain CDA09_01025 5b9135f7fdee4dbd2c1f2440274a2d8d 224 Gene3D G3DSA:3.40.30.10 59 220 1.1E-30 T 01-11-2018 CDA09_01025 5b9135f7fdee4dbd2c1f2440274a2d8d 224 Pfam PF02630 SCO1/SenC 85 147 7.3E-12 T 01-11-2018 IPR003782 Copper chaperone SCO1/SenC Reactome: R-HSA-5628897|Reactome: R-HSA-611105 CDA09_01025 5b9135f7fdee4dbd2c1f2440274a2d8d 224 SUPERFAMILY SSF52833 64 217 1.68E-29 T 01-11-2018 IPR036249 Thioredoxin-like superfamily CDA09_14050 405e25adcd81c9cb3bd349579ecc5226 198 TIGRFAM TIGR03751 conj_TIGR03751: conjugative transfer region lipoprotein, TIGR03751 family 67 181 5.8E-31 T 01-11-2018 IPR022262 Lipoprotein, putative CDA09_11595 6862251ad086099009833ea57c0451e0 337 Gene3D G3DSA:3.30.360.10 155 318 2.9E-137 T 01-11-2018 CDA09_11595 6862251ad086099009833ea57c0451e0 337 SUPERFAMILY SSF51735 2 155 1.45E-54 T 01-11-2018 IPR036291 NAD(P)-binding domain superfamily CDA09_11595 6862251ad086099009833ea57c0451e0 337 ProSitePatterns PS00071 Glyceraldehyde 3-phosphate dehydrogenase active site. 154 161 - T 01-11-2018 IPR020830 Glyceraldehyde 3-phosphate dehydrogenase, active site GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 CDA09_11595 6862251ad086099009833ea57c0451e0 337 TIGRFAM TIGR01534 GAPDH-I: glyceraldehyde-3-phosphate dehydrogenase, type I 4 328 4.2E-119 T 01-11-2018 IPR006424 Glyceraldehyde-3-phosphate dehydrogenase, type I GO:0006006|GO:0016620|GO:0050661|GO:0051287|GO:0055114 KEGG: 00010+1.2.1.12|KEGG: 00710+1.2.1.12|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 CDA09_11595 6862251ad086099009833ea57c0451e0 337 Gene3D G3DSA:3.40.50.720 4 328 2.9E-137 T 01-11-2018 CDA09_11595 6862251ad086099009833ea57c0451e0 337 SMART SM00846 3 156 6.4E-80 T 01-11-2018 IPR020828 Glyceraldehyde 3-phosphate dehydrogenase, NAD(P) binding domain GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 CDA09_11595 6862251ad086099009833ea57c0451e0 337 SUPERFAMILY SSF55347 156 317 1.81E-65 T 01-11-2018 CDA09_11595 6862251ad086099009833ea57c0451e0 337 Pfam PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain 3 106 1.4E-32 T 01-11-2018 IPR020828 Glyceraldehyde 3-phosphate dehydrogenase, NAD(P) binding domain GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 CDA09_11595 6862251ad086099009833ea57c0451e0 337 Pfam PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain 161 316 3.3E-59 T 01-11-2018 IPR020829 Glyceraldehyde 3-phosphate dehydrogenase, catalytic domain GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 CDA09_11595 6862251ad086099009833ea57c0451e0 337 PRINTS PR00078 Glyceraldehyde-3-phosphate dehydrogenase signature 233 250 1.1E-33 T 01-11-2018 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 CDA09_11595 6862251ad086099009833ea57c0451e0 337 PRINTS PR00078 Glyceraldehyde-3-phosphate dehydrogenase signature 113 126 1.1E-33 T 01-11-2018 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 CDA09_11595 6862251ad086099009833ea57c0451e0 337 PRINTS PR00078 Glyceraldehyde-3-phosphate dehydrogenase signature 177 193 1.1E-33 T 01-11-2018 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 CDA09_11595 6862251ad086099009833ea57c0451e0 337 PRINTS PR00078 Glyceraldehyde-3-phosphate dehydrogenase signature 150 168 1.1E-33 T 01-11-2018 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 CDA09_11595 6862251ad086099009833ea57c0451e0 337 PRINTS PR00078 Glyceraldehyde-3-phosphate dehydrogenase signature 273 288 1.1E-33 T 01-11-2018 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 CDA09_11595 6862251ad086099009833ea57c0451e0 337 PIRSF PIRSF000149 1 337 3.9E-129 T 01-11-2018 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 CDA09_01160 e268f6871e431700e49b02e3b8ce6a38 145 PIRSF PIRSF003174 1 145 2.8E-67 T 01-11-2018 IPR010292 Uncharacterised protein family CreA CDA09_01160 e268f6871e431700e49b02e3b8ce6a38 145 Pfam PF05981 CreA protein 13 137 7.8E-56 T 01-11-2018 IPR010292 Uncharacterised protein family CreA CDA09_09370 1251346863b1b054b3f217c07548587f 569 SUPERFAMILY SSF56425 322 500 3.56E-32 T 01-11-2018 IPR027477 Succinate dehydrogenase/fumarate reductase flavoprotein, catalytic domain superfamily Reactome: R-HSA-611105|Reactome: R-HSA-71403 CDA09_09370 1251346863b1b054b3f217c07548587f 569 SUPERFAMILY SSF51905 8 567 9.54E-42 T 01-11-2018 IPR036188 FAD/NAD(P)-binding domain superfamily CDA09_09370 1251346863b1b054b3f217c07548587f 569 Pfam PF00890 FAD binding domain 12 550 1.2E-89 T 01-11-2018 IPR003953 FAD-dependent oxidoreductase 2, FAD binding domain Reactome: R-HSA-611105|Reactome: R-HSA-71403 CDA09_09370 1251346863b1b054b3f217c07548587f 569 Gene3D G3DSA:3.50.50.60 11 562 9.6E-160 T 01-11-2018 IPR036188 FAD/NAD(P)-binding domain superfamily CDA09_09370 1251346863b1b054b3f217c07548587f 569 Gene3D G3DSA:3.90.700.10 346 499 9.6E-160 T 01-11-2018 IPR027477 Succinate dehydrogenase/fumarate reductase flavoprotein, catalytic domain superfamily Reactome: R-HSA-611105|Reactome: R-HSA-71403 CDA09_10810 27c3892524fcaac77ce31509d45add71 457 ProSitePatterns PS00600 Aminotransferases class-III pyridoxal-phosphate attachment site. 255 292 - T 01-11-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 CDA09_10810 27c3892524fcaac77ce31509d45add71 457 Pfam PF00202 Aminotransferase class-III 34 450 2.7E-74 T 01-11-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 CDA09_10810 27c3892524fcaac77ce31509d45add71 457 SUPERFAMILY SSF53383 18 453 5.46E-91 T 01-11-2018 IPR015424 Pyridoxal phosphate-dependent transferase CDA09_10810 27c3892524fcaac77ce31509d45add71 457 Gene3D G3DSA:3.40.640.10 63 340 4.3E-100 T 01-11-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 CDA09_10810 27c3892524fcaac77ce31509d45add71 457 Gene3D G3DSA:3.90.1150.10 21 448 4.3E-100 T 01-11-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 CDA09_05125 bca98af918c9f72e58488054af8fd472 621 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 446 607 3.0E-53 T 01-11-2018 IPR000160 GGDEF domain CDA09_05125 bca98af918c9f72e58488054af8fd472 621 Pfam PF00990 Diguanylate cyclase, GGDEF domain 449 605 7.0E-46 T 01-11-2018 IPR000160 GGDEF domain CDA09_05125 bca98af918c9f72e58488054af8fd472 621 Gene3D G3DSA:3.30.70.270 441 611 1.0E-56 T 01-11-2018 CDA09_05125 bca98af918c9f72e58488054af8fd472 621 SMART SM00267 437 609 1.4E-56 T 01-11-2018 IPR000160 GGDEF domain CDA09_05125 bca98af918c9f72e58488054af8fd472 621 SUPERFAMILY SSF55073 453 611 2.04E-49 T 01-11-2018 IPR029787 Nucleotide cyclase CDA09_05980 b7bc0dd69b23b0f8820043a35ea3b1a3 209 SUPERFAMILY SSF49777 1 203 2.88E-44 T 01-11-2018 IPR036610 PEBP-like superfamily CDA09_05980 b7bc0dd69b23b0f8820043a35ea3b1a3 209 Pfam PF01161 Phosphatidylethanolamine-binding protein 31 201 3.4E-39 T 01-11-2018 IPR008914 Phosphatidylethanolamine-binding protein CDA09_05980 b7bc0dd69b23b0f8820043a35ea3b1a3 209 TIGRFAM TIGR00481 TIGR00481: Raf kinase inhibitor-like protein, YbhB/YbcL family 32 201 1.4E-25 T 01-11-2018 IPR005247 YbhB/YbcL CDA09_05980 b7bc0dd69b23b0f8820043a35ea3b1a3 209 Gene3D G3DSA:3.90.280.10 1 202 5.8E-49 T 01-11-2018 IPR036610 PEBP-like superfamily CDA09_06385 e84b3606f235a617271f4ec878f76473 408 SUPERFAMILY SSF53756 18 391 1.22E-82 T 01-11-2018 CDA09_06385 e84b3606f235a617271f4ec878f76473 408 Gene3D G3DSA:3.40.50.2000 16 217 1.8E-30 T 01-11-2018 CDA09_06385 e84b3606f235a617271f4ec878f76473 408 Gene3D G3DSA:3.40.50.2000 218 372 8.3E-38 T 01-11-2018 CDA09_06385 e84b3606f235a617271f4ec878f76473 408 Pfam PF13439 Glycosyltransferase Family 4 30 198 3.5E-26 T 01-11-2018 IPR028098 Glycosyltransferase subfamily 4-like, N-terminal domain Reactome: R-HSA-446193|Reactome: R-HSA-4549349 CDA09_06385 e84b3606f235a617271f4ec878f76473 408 Pfam PF00534 Glycosyl transferases group 1 212 369 1.6E-31 T 01-11-2018 IPR001296 Glycosyl transferase, family 1 CDA09_19745 805502149bd4964e6d4b38862291530d 660 SUPERFAMILY SSF48695 31 519 1.78E-48 T 01-11-2018 IPR036280 Multiheme cytochrome superfamily CDA09_19745 805502149bd4964e6d4b38862291530d 660 Gene3D G3DSA:1.20.950.20 389 623 5.3E-39 T 01-11-2018 CDA09_01990 39b758c542b3634552f1ce63663e05f3 203 Pfam PF13417 Glutathione S-transferase, N-terminal domain 3 77 2.9E-18 T 01-11-2018 IPR004045 Glutathione S-transferase, N-terminal GO:0005515 CDA09_01990 39b758c542b3634552f1ce63663e05f3 203 Gene3D G3DSA:3.40.30.10 2 195 1.3E-68 T 01-11-2018 CDA09_01990 39b758c542b3634552f1ce63663e05f3 203 Gene3D G3DSA:1.20.1050.10 79 192 1.3E-68 T 01-11-2018 CDA09_01990 39b758c542b3634552f1ce63663e05f3 203 SUPERFAMILY SSF52833 1 100 2.96E-20 T 01-11-2018 IPR036249 Thioredoxin-like superfamily CDA09_01990 39b758c542b3634552f1ce63663e05f3 203 SUPERFAMILY SSF47616 70 200 1.18E-24 T 01-11-2018 IPR036282 Glutathione S-transferase, C-terminal domain superfamily CDA09_01990 39b758c542b3634552f1ce63663e05f3 203 Pfam PF13410 Glutathione S-transferase, C-terminal domain 121 183 2.9E-10 T 01-11-2018 CDA09_22335 ba5470868d191ca167b6de78c14f9c49 426 SUPERFAMILY SSF53448 54 330 2.06E-57 T 01-11-2018 IPR029044 Nucleotide-diphospho-sugar transferases CDA09_22335 ba5470868d191ca167b6de78c14f9c49 426 Gene3D G3DSA:3.90.550.10 55 274 8.6E-41 T 01-11-2018 IPR029044 Nucleotide-diphospho-sugar transferases CDA09_22335 ba5470868d191ca167b6de78c14f9c49 426 TIGRFAM TIGR03937 PgaC_IcaA: poly-beta-1,6 N-acetyl-D-glucosamine synthase 20 424 1.3E-176 T 01-11-2018 IPR023853 Poly-beta-1,6 N-acetyl-D-glucosamine synthase PgaC/IcaA GO:0008375|GO:0043708 CDA09_22335 ba5470868d191ca167b6de78c14f9c49 426 Pfam PF13641 Glycosyltransferase like family 2 62 285 7.2E-34 T 01-11-2018 CDA09_03195 6867d696e2856a7de1d780843113fa70 459 SUPERFAMILY SSF143548 17 158 2.14E-47 T 01-11-2018 IPR029009 Allosteric substrate binding domain superfamily Reactome: R-HSA-977347 CDA09_03195 6867d696e2856a7de1d780843113fa70 459 TIGRFAM TIGR00720 sda_mono: L-serine ammonia-lyase 3 456 1.5E-221 T 01-11-2018 IPR004644 Iron-sulphur-dependent L-serine dehydratase single chain form GO:0003941|GO:0006094 KEGG: 00260+4.3.1.17|KEGG: 00270+4.3.1.17 CDA09_03195 6867d696e2856a7de1d780843113fa70 459 Gene3D G3DSA:3.30.1330.90 11 160 3.8E-57 T 01-11-2018 IPR029009 Allosteric substrate binding domain superfamily Reactome: R-HSA-977347 CDA09_03195 6867d696e2856a7de1d780843113fa70 459 Pfam PF03315 Serine dehydratase beta chain 4 156 9.8E-61 T 01-11-2018 IPR005131 Serine dehydratase beta chain GO:0003941|GO:0006094|GO:0051539 KEGG: 00260+4.3.1.17|KEGG: 00270+4.3.1.17 CDA09_03195 6867d696e2856a7de1d780843113fa70 459 Pfam PF03313 Serine dehydratase alpha chain 187 453 4.7E-106 T 01-11-2018 IPR005130 Serine dehydratase-like, alpha subunit CDA09_14535 cbd3963fa34d27d056fd7a4b195274dd 86 SUPERFAMILY SSF55229 36 84 1.31E-14 T 01-11-2018 IPR036707 Cell division topological specificity factor MinE superfamily GO:0032955|GO:0051301 CDA09_14535 cbd3963fa34d27d056fd7a4b195274dd 86 Hamap MF_00262 Cell division topological specificity factor [minE]. 3 84 17.385 T 01-11-2018 IPR005527 Cell division topological specificity factor MinE GO:0032955|GO:0051301 CDA09_14535 cbd3963fa34d27d056fd7a4b195274dd 86 Pfam PF03776 Septum formation topological specificity factor MinE 14 82 2.8E-22 T 01-11-2018 IPR005527 Cell division topological specificity factor MinE GO:0032955|GO:0051301 CDA09_14535 cbd3963fa34d27d056fd7a4b195274dd 86 Gene3D G3DSA:3.30.1070.10 1 83 6.1E-25 T 01-11-2018 IPR036707 Cell division topological specificity factor MinE superfamily GO:0032955|GO:0051301 CDA09_14535 cbd3963fa34d27d056fd7a4b195274dd 86 TIGRFAM TIGR01215 minE: cell division topological specificity factor MinE 1 83 5.3E-26 T 01-11-2018 IPR005527 Cell division topological specificity factor MinE GO:0032955|GO:0051301 CDA09_08515 bb4df2d10daf6d6f204108943617840e 194 Gene3D G3DSA:1.20.120.520 1 160 4.3E-30 T 01-11-2018 CDA09_08515 bb4df2d10daf6d6f204108943617840e 194 Pfam PF01814 Hemerythrin HHE cation binding domain 3 139 8.7E-15 T 01-11-2018 IPR012312 Haemerythrin-like Reactome: R-HSA-390471|Reactome: R-HSA-8951664|Reactome: R-HSA-917937|Reactome: R-HSA-983168 CDA09_16430 1c3bc32f2c7559acd9f3e79402eddc19 207 Gene3D G3DSA:3.20.20.70 2 206 3.2E-67 T 01-11-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 CDA09_16430 1c3bc32f2c7559acd9f3e79402eddc19 207 Hamap MF_00135 N-(5'-phosphoribosyl)anthranilate isomerase [trpF]. 4 205 42.041 T 01-11-2018 IPR001240 N-(5'phosphoribosyl) anthranilate isomerase (PRAI) GO:0004640|GO:0006568 KEGG: 00400+5.3.1.24 CDA09_16430 1c3bc32f2c7559acd9f3e79402eddc19 207 SUPERFAMILY SSF51366 4 202 2.67E-62 T 01-11-2018 IPR011060 Ribulose-phosphate binding barrel GO:0003824 CDA09_16430 1c3bc32f2c7559acd9f3e79402eddc19 207 Pfam PF00697 N-(5'phosphoribosyl)anthranilate (PRA) isomerase 6 199 5.7E-49 T 01-11-2018 IPR001240 N-(5'phosphoribosyl) anthranilate isomerase (PRAI) GO:0004640|GO:0006568 KEGG: 00400+5.3.1.24 CDA09_19520 7ffb0b087b58a3fe7fce1295538c92d7 206 SUPERFAMILY SSF52166 1 205 1.83E-67 T 01-11-2018 IPR023574 Ribosomal protein L4 domain superfamily GO:0003735|GO:0005840|GO:0006412 CDA09_19520 7ffb0b087b58a3fe7fce1295538c92d7 206 Hamap MF_01328_B 50S ribosomal protein L4 [rplD]. 8 206 31.428 T 01-11-2018 IPR013005 50S ribosomal protein uL4 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 CDA09_19520 7ffb0b087b58a3fe7fce1295538c92d7 206 TIGRFAM TIGR03953 rplD_bact: 50S ribosomal protein uL4 17 203 4.2E-68 T 01-11-2018 IPR013005 50S ribosomal protein uL4 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 CDA09_19520 7ffb0b087b58a3fe7fce1295538c92d7 206 Gene3D G3DSA:3.40.1370.10 6 206 2.4E-63 T 01-11-2018 IPR023574 Ribosomal protein L4 domain superfamily GO:0003735|GO:0005840|GO:0006412 CDA09_19520 7ffb0b087b58a3fe7fce1295538c92d7 206 Pfam PF00573 Ribosomal protein L4/L1 family 19 203 2.5E-61 T 01-11-2018 IPR002136 Ribosomal protein L4/L1e GO:0003735|GO:0005840|GO:0006412 CDA09_00805 fbd59e8df8127fb635bd595bbe2f414b 137 ProSitePatterns PS00550 Hemerythrin family signature. 58 81 - T 01-11-2018 IPR016131 Haemerythrin, iron-binding site GO:0046872 CDA09_00805 fbd59e8df8127fb635bd595bbe2f414b 137 Pfam PF01814 Hemerythrin HHE cation binding domain 16 126 7.9E-8 T 01-11-2018 IPR012312 Haemerythrin-like Reactome: R-HSA-390471|Reactome: R-HSA-8951664|Reactome: R-HSA-917937|Reactome: R-HSA-983168 CDA09_00805 fbd59e8df8127fb635bd595bbe2f414b 137 TIGRFAM TIGR02481 hemeryth_dom: hemerythrin-like metal-binding domain 5 127 1.9E-27 T 01-11-2018 IPR012827 Haemerythrin, metal-binding domain GO:0046872 CDA09_00805 fbd59e8df8127fb635bd595bbe2f414b 137 SUPERFAMILY SSF47188 4 126 8.37E-27 T 01-11-2018 IPR035938 Hemerythrin-like superfamily CDA09_00805 fbd59e8df8127fb635bd595bbe2f414b 137 Gene3D G3DSA:1.20.120.50 2 133 3.7E-27 T 01-11-2018 IPR035938 Hemerythrin-like superfamily CDA09_09015 eec2c9ae7f1950c0dd7005100aec1abf 388 Pfam PF00108 Thiolase, N-terminal domain 10 228 6.6E-7 T 01-11-2018 IPR020616 Thiolase, N-terminal GO:0016747 CDA09_09015 eec2c9ae7f1950c0dd7005100aec1abf 388 SUPERFAMILY SSF53901 8 234 5.77E-23 T 01-11-2018 IPR016039 Thiolase-like GO:0003824 CDA09_09015 eec2c9ae7f1950c0dd7005100aec1abf 388 Gene3D G3DSA:3.40.47.10 1 388 1.3E-89 T 01-11-2018 IPR016039 Thiolase-like GO:0003824 CDA09_09015 eec2c9ae7f1950c0dd7005100aec1abf 388 SUPERFAMILY SSF53901 262 363 1.32E-10 T 01-11-2018 IPR016039 Thiolase-like GO:0003824 CDA09_09015 eec2c9ae7f1950c0dd7005100aec1abf 388 PIRSF PIRSF000429 4 340 1.3E-22 T 01-11-2018 IPR002155 Thiolase GO:0016747 CDA09_04340 4ca87173cb92a293bc13b8ef751074bb 176 Hamap MF_00237 Sec-independent protein translocase protein TatB [tatB]. 1 176 17.149 T 01-11-2018 IPR018448 Twin-arginine translocation protein TatB GO:0016020|GO:0043953 CDA09_04340 4ca87173cb92a293bc13b8ef751074bb 176 PRINTS PR01506 Bacterial sec-independent translocation TatB protein signature 1 21 2.9E-17 T 01-11-2018 CDA09_04340 4ca87173cb92a293bc13b8ef751074bb 176 PRINTS PR01506 Bacterial sec-independent translocation TatB protein signature 40 58 2.9E-17 T 01-11-2018 CDA09_04340 4ca87173cb92a293bc13b8ef751074bb 176 PRINTS PR01506 Bacterial sec-independent translocation TatB protein signature 21 40 2.9E-17 T 01-11-2018 CDA09_04340 4ca87173cb92a293bc13b8ef751074bb 176 Pfam PF02416 mttA/Hcf106 family 5 53 8.1E-10 T 01-11-2018 IPR003369 Sec-independent protein translocase protein TatA/B/E GO:0008565|GO:0015031 CDA09_04340 4ca87173cb92a293bc13b8ef751074bb 176 TIGRFAM TIGR01410 tatB: twin arginine-targeting protein translocase TatB 2 78 2.2E-23 T 01-11-2018 IPR018448 Twin-arginine translocation protein TatB GO:0016020|GO:0043953 CDA09_21140 7e400ca3cfacfeae6322b437bc6d2cb7 103 ProSitePatterns PS00018 EF-hand calcium-binding domain. 80 92 - T 01-11-2018 IPR018247 EF-Hand 1, calcium-binding site CDA09_21140 7e400ca3cfacfeae6322b437bc6d2cb7 103 Gene3D G3DSA:1.10.238.10 39 100 1.5E-11 T 01-11-2018 CDA09_21140 7e400ca3cfacfeae6322b437bc6d2cb7 103 SUPERFAMILY SSF47473 38 96 1.82E-9 T 01-11-2018 IPR011992 EF-hand domain pair CDA09_21140 7e400ca3cfacfeae6322b437bc6d2cb7 103 Pfam PF13202 EF hand 72 94 2.7E-6 T 01-11-2018 IPR002048 EF-hand domain GO:0005509 CDA09_21140 7e400ca3cfacfeae6322b437bc6d2cb7 103 Pfam PF13202 EF hand 49 62 0.016 T 01-11-2018 IPR002048 EF-hand domain GO:0005509 CDA09_15400 c72a176cb5eccced9606e2254f6dc916 325 SUPERFAMILY SSF52768 3 279 6.23E-80 T 01-11-2018 IPR023696 Ureohydrolase domain superfamily CDA09_15400 c72a176cb5eccced9606e2254f6dc916 325 Pfam PF00850 Histone deacetylase domain 21 279 6.7E-48 T 01-11-2018 IPR023801 Histone deacetylase domain Reactome: R-HSA-2122947|Reactome: R-HSA-2644606|Reactome: R-HSA-2894862 CDA09_15400 c72a176cb5eccced9606e2254f6dc916 325 Gene3D G3DSA:3.40.800.20 5 304 1.6E-67 T 01-11-2018 IPR037138 Histone deacetylase domain superfamily Reactome: R-HSA-2122947|Reactome: R-HSA-2644606|Reactome: R-HSA-2894862 CDA09_15400 c72a176cb5eccced9606e2254f6dc916 325 PRINTS PR01270 Histone deacetylase superfamily signature 223 233 1.2E-13 T 01-11-2018 IPR000286 Histone deacetylase family Reactome: R-HSA-2122947|Reactome: R-HSA-2644606|Reactome: R-HSA-2894862 CDA09_15400 c72a176cb5eccced9606e2254f6dc916 325 PRINTS PR01270 Histone deacetylase superfamily signature 149 164 1.2E-13 T 01-11-2018 IPR000286 Histone deacetylase family Reactome: R-HSA-2122947|Reactome: R-HSA-2644606|Reactome: R-HSA-2894862 CDA09_15400 c72a176cb5eccced9606e2254f6dc916 325 PRINTS PR01270 Histone deacetylase superfamily signature 115 138 1.2E-13 T 01-11-2018 IPR000286 Histone deacetylase family Reactome: R-HSA-2122947|Reactome: R-HSA-2644606|Reactome: R-HSA-2894862 CDA09_16455 ef78fdc9370d7a9b5d76d2f25f4ae930 350 Hamap MF_01033 3-isopropylmalate dehydrogenase [leuB]. 1 350 52.799 T 01-11-2018 IPR004429 Isopropylmalate dehydrogenase GO:0003862|GO:0005737|GO:0009098|GO:0055114 KEGG: 00290+1.1.1.85|KEGG: 00660+1.1.1.85|MetaCyc: PWY-7396 CDA09_16455 ef78fdc9370d7a9b5d76d2f25f4ae930 350 TIGRFAM TIGR00169 leuB: 3-isopropylmalate dehydrogenase 2 345 1.2E-157 T 01-11-2018 IPR004429 Isopropylmalate dehydrogenase GO:0003862|GO:0005737|GO:0009098|GO:0055114 KEGG: 00290+1.1.1.85|KEGG: 00660+1.1.1.85|MetaCyc: PWY-7396 CDA09_16455 ef78fdc9370d7a9b5d76d2f25f4ae930 350 ProSitePatterns PS00470 Isocitrate and isopropylmalate dehydrogenases signature. 237 256 - T 01-11-2018 IPR019818 Isocitrate/isopropylmalate dehydrogenase, conserved site GO:0000287|GO:0016616|GO:0051287|GO:0055114 Reactome: R-HSA-71403 CDA09_16455 ef78fdc9370d7a9b5d76d2f25f4ae930 350 Pfam PF00180 Isocitrate/isopropylmalate dehydrogenase 2 346 3.1E-135 T 01-11-2018 IPR024084 Isopropylmalate dehydrogenase-like domain GO:0016616|GO:0055114 Reactome: R-HSA-71403 CDA09_16455 ef78fdc9370d7a9b5d76d2f25f4ae930 350 SUPERFAMILY SSF53659 2 350 1.09E-123 T 01-11-2018 CDA09_16455 ef78fdc9370d7a9b5d76d2f25f4ae930 350 Gene3D G3DSA:3.40.718.10 1 350 1.4E-151 T 01-11-2018 CDA09_16455 ef78fdc9370d7a9b5d76d2f25f4ae930 350 SMART SM01329 2 346 1.4E-209 T 01-11-2018 IPR024084 Isopropylmalate dehydrogenase-like domain GO:0016616|GO:0055114 Reactome: R-HSA-71403 CDA09_21125 01592ef4e7a7dad7805cfc662c8a3607 688 SUPERFAMILY SSF56935 38 679 4.03E-82 T 01-11-2018 CDA09_21125 01592ef4e7a7dad7805cfc662c8a3607 688 Pfam PF07715 TonB-dependent Receptor Plug Domain 50 158 3.0E-15 T 01-11-2018 IPR012910 TonB-dependent receptor, plug domain CDA09_21125 01592ef4e7a7dad7805cfc662c8a3607 688 Gene3D G3DSA:2.170.130.10 33 163 4.0E-25 T 01-11-2018 IPR037066 TonB-dependent receptor, plug domain superfamily CDA09_21125 01592ef4e7a7dad7805cfc662c8a3607 688 Pfam PF00593 TonB dependent receptor 235 679 2.4E-28 T 01-11-2018 IPR000531 TonB-dependent receptor-like, beta-barrel CDA09_21125 01592ef4e7a7dad7805cfc662c8a3607 688 Gene3D G3DSA:2.40.170.20 166 665 4.5E-47 T 01-11-2018 IPR036942 TonB-dependent receptor-like, beta-barrel domain superfamily CDA09_08320 eed8c5b0a4ae0648d3aef28eca08bec6 281 Pfam PF01012 Electron transfer flavoprotein domain 23 210 1.6E-47 T 01-11-2018 IPR014730 Electron transfer flavoprotein, alpha/beta-subunit, N-terminal Reactome: R-HSA-611105 CDA09_08320 eed8c5b0a4ae0648d3aef28eca08bec6 281 PIRSF PIRSF000090 1 271 4.0E-91 T 01-11-2018 IPR012255 Electron transfer flavoprotein, beta subunit GO:0009055 Reactome: R-HSA-611105|Reactome: R-HSA-8876725 CDA09_08320 eed8c5b0a4ae0648d3aef28eca08bec6 281 SMART SM00893 22 218 1.3E-60 T 01-11-2018 IPR014730 Electron transfer flavoprotein, alpha/beta-subunit, N-terminal Reactome: R-HSA-611105 CDA09_08320 eed8c5b0a4ae0648d3aef28eca08bec6 281 ProSitePatterns PS01065 Electron transfer flavoprotein beta-subunit signature. 162 182 - T 01-11-2018 IPR000049 Electron transfer flavoprotein, beta-subunit, conserved site GO:0009055 Reactome: R-HSA-611105|Reactome: R-HSA-8876725 CDA09_08320 eed8c5b0a4ae0648d3aef28eca08bec6 281 Gene3D G3DSA:3.40.50.620 1 268 8.3E-85 T 01-11-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold CDA09_08320 eed8c5b0a4ae0648d3aef28eca08bec6 281 SUPERFAMILY SSF52402 1 261 4.19E-72 T 01-11-2018 CDA09_06305 6e07a1feac9a5b83422e50c25a969629 230 SMART SM00862 150 225 5.6E-29 T 01-11-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 CDA09_06305 6e07a1feac9a5b83422e50c25a969629 230 SUPERFAMILY SSF52172 1 118 3.84E-36 T 01-11-2018 IPR011006 CheY-like superfamily CDA09_06305 6e07a1feac9a5b83422e50c25a969629 230 SMART SM00448 1 112 5.6E-38 T 01-11-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 CDA09_06305 6e07a1feac9a5b83422e50c25a969629 230 SUPERFAMILY SSF46894 128 226 5.39E-31 T 01-11-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 CDA09_06305 6e07a1feac9a5b83422e50c25a969629 230 Gene3D G3DSA:1.10.10.10 127 229 3.0E-34 T 01-11-2018 IPR036388 Winged helix-like DNA-binding domain superfamily CDA09_06305 6e07a1feac9a5b83422e50c25a969629 230 Gene3D G3DSA:3.40.50.2300 1 121 2.9E-36 T 01-11-2018 CDA09_06305 6e07a1feac9a5b83422e50c25a969629 230 Pfam PF00486 Transcriptional regulatory protein, C terminal 150 225 2.1E-27 T 01-11-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 CDA09_06305 6e07a1feac9a5b83422e50c25a969629 230 Pfam PF00072 Response regulator receiver domain 3 112 2.1E-25 T 01-11-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 CDA09_13545 b7ddfbbebc4d97ef25c805a3e560e2e5 347 Gene3D G3DSA:3.30.530.90 130 329 2.5E-11 T 01-11-2018 CDA09_13545 b7ddfbbebc4d97ef25c805a3e560e2e5 347 SUPERFAMILY SSF55961 98 332 4.18E-25 T 01-11-2018 CDA09_17590 22f5891d2e3c8dc071001f17ebe1ffa2 240 SUPERFAMILY SSF103088 118 236 2.88E-35 T 01-11-2018 IPR036737 OmpA-like domain superfamily CDA09_17590 22f5891d2e3c8dc071001f17ebe1ffa2 240 Gene3D G3DSA:3.30.1330.60 102 240 1.6E-50 T 01-11-2018 IPR036737 OmpA-like domain superfamily CDA09_17590 22f5891d2e3c8dc071001f17ebe1ffa2 240 PRINTS PR01021 OMPA domain signature 172 188 2.0E-21 T 01-11-2018 IPR006664 Outer membrane protein, bacterial GO:0009279|GO:0016021 CDA09_17590 22f5891d2e3c8dc071001f17ebe1ffa2 240 PRINTS PR01021 OMPA domain signature 157 172 2.0E-21 T 01-11-2018 IPR006664 Outer membrane protein, bacterial GO:0009279|GO:0016021 CDA09_17590 22f5891d2e3c8dc071001f17ebe1ffa2 240 PRINTS PR01021 OMPA domain signature 127 149 2.0E-21 T 01-11-2018 IPR006664 Outer membrane protein, bacterial GO:0009279|GO:0016021 CDA09_17590 22f5891d2e3c8dc071001f17ebe1ffa2 240 PRINTS PR01022 Outer membrane protein A signature 215 228 1.5E-5 T 01-11-2018 IPR002368 Outer membrane protein, OmpA GO:0005198|GO:0009279|GO:0016021 CDA09_17590 22f5891d2e3c8dc071001f17ebe1ffa2 240 PRINTS PR01022 Outer membrane protein A signature 181 200 1.5E-5 T 01-11-2018 IPR002368 Outer membrane protein, OmpA GO:0005198|GO:0009279|GO:0016021 CDA09_17590 22f5891d2e3c8dc071001f17ebe1ffa2 240 PRINTS PR01022 Outer membrane protein A signature 115 130 1.5E-5 T 01-11-2018 IPR002368 Outer membrane protein, OmpA GO:0005198|GO:0009279|GO:0016021 CDA09_17590 22f5891d2e3c8dc071001f17ebe1ffa2 240 ProSitePatterns PS01068 OmpA-like domain. 159 203 - T 01-11-2018 IPR006690 Outer membrane protein, OmpA-like, conserved site GO:0009279|GO:0016021 CDA09_17590 22f5891d2e3c8dc071001f17ebe1ffa2 240 Pfam PF00691 OmpA family 126 217 1.6E-22 T 01-11-2018 IPR006665 OmpA-like domain CDA09_06080 cbbc0cc5a128fd382b5ce3fc28e70e7a 403 Pfam PF03631 Virulence factor BrkB 23 268 2.0E-52 T 01-11-2018 IPR017039 Virulence factor BrkB CDA09_06080 cbbc0cc5a128fd382b5ce3fc28e70e7a 403 TIGRFAM TIGR00765 yihY_not_rbn: YihY family inner membrane protein 12 268 3.0E-63 T 01-11-2018 IPR017039 Virulence factor BrkB CDA09_06080 cbbc0cc5a128fd382b5ce3fc28e70e7a 403 Hamap MF_00672 UPF0761 membrane protein YihY [yihY]. 6 299 21.603 T 01-11-2018 IPR023679 Uncharacterised protein family UPF0761, bacterial CDA09_10340 3ee7e97da6344107a2310d9b735224a1 262 Pfam PF01557 Fumarylacetoacetate (FAA) hydrolase family 103 260 6.8E-7 T 01-11-2018 IPR011234 Fumarylacetoacetase-like, C-terminal GO:0003824 CDA09_10340 3ee7e97da6344107a2310d9b735224a1 262 TIGRFAM TIGR03218 catechol_dmpH: 4-oxalocrotonate decarboxylase 1 261 1.9E-147 T 01-11-2018 IPR017630 4-oxalocrotonate decarboxylase KEGG: 00362+4.1.1.77|KEGG: 00621+4.1.1.77|KEGG: 00622+4.1.1.77|MetaCyc: PWY-5419|MetaCyc: PWY-5644|MetaCyc: PWY-5645|MetaCyc: PWY-5647|MetaCyc: PWY-5654|MetaCyc: PWY-6210|MetaCyc: PWY-6214|MetaCyc: PWY-6336|MetaCyc: PWY-7006|MetaCyc: PWY-7009|MetaCyc: PWY-7480 CDA09_10340 3ee7e97da6344107a2310d9b735224a1 262 Gene3D G3DSA:3.90.850.10 1 262 1.9E-78 T 01-11-2018 IPR036663 Fumarylacetoacetase-like, C-terminal domain superfamily GO:0003824 CDA09_10340 3ee7e97da6344107a2310d9b735224a1 262 SUPERFAMILY SSF56529 3 261 1.02E-74 T 01-11-2018 IPR036663 Fumarylacetoacetase-like, C-terminal domain superfamily GO:0003824 CDA09_01985 74f9691c7d3b4fa71e3edb96059de23a 327 Pfam PF00005 ABC transporter 32 173 1.6E-30 T 01-11-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 CDA09_01985 74f9691c7d3b4fa71e3edb96059de23a 327 Gene3D G3DSA:3.40.50.300 6 248 8.0E-73 T 01-11-2018 CDA09_01985 74f9691c7d3b4fa71e3edb96059de23a 327 ProSitePatterns PS00211 ABC transporters family signature. 146 160 - T 01-11-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 CDA09_01985 74f9691c7d3b4fa71e3edb96059de23a 327 SUPERFAMILY SSF52540 15 234 2.97E-67 T 01-11-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CDA09_01985 74f9691c7d3b4fa71e3edb96059de23a 327 SMART SM00382 39 222 3.7E-14 T 01-11-2018 IPR003593 AAA+ ATPase domain CDA09_05305 9af345cf2969e744c54fac12ce216861 252 SUPERFAMILY SSF69572 2 247 1.83E-84 T 01-11-2018 IPR035985 Ubiquitin-activating enzyme GO:0008641 CDA09_05305 9af345cf2969e744c54fac12ce216861 252 Gene3D G3DSA:3.40.50.720 1 251 2.1E-90 T 01-11-2018 CDA09_05305 9af345cf2969e744c54fac12ce216861 252 Pfam PF00899 ThiF family 9 243 8.3E-62 T 01-11-2018 IPR000594 THIF-type NAD/FAD binding fold GO:0008641 CDA09_22610 c49bf94f406d04cdfc7193d56f109b52 343 Pfam PF03480 Bacterial extracellular solute-binding protein, family 7 36 318 5.7E-48 T 01-11-2018 IPR018389 TRAP transporter solute receptor DctP/TeaA GO:0030288|GO:0055085 CDA09_22610 c49bf94f406d04cdfc7193d56f109b52 343 Gene3D G3DSA:3.40.190.170 28 343 6.7E-107 T 01-11-2018 IPR038404 TRAP transporter solute receptor DctP superfamily CDA09_22610 c49bf94f406d04cdfc7193d56f109b52 343 SUPERFAMILY SSF53850 131 283 3.29E-6 T 01-11-2018 CDA09_00500 97c76fd55b053d27be87af5acbdc147b 141 Pfam PF02823 ATP synthase, Delta/Epsilon chain, beta-sandwich domain 6 85 5.9E-28 T 01-11-2018 IPR020546 ATP synthase, F1 complex, delta/epsilon subunit, N-terminal GO:0015986 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 CDA09_00500 97c76fd55b053d27be87af5acbdc147b 141 Pfam PF00401 ATP synthase, Delta/Epsilon chain, long alpha-helix domain 90 134 4.1E-10 T 01-11-2018 IPR020547 ATP synthase delta/epsilon subunit, C-terminal domain CDA09_00500 97c76fd55b053d27be87af5acbdc147b 141 SUPERFAMILY SSF46604 89 138 1.39E-13 T 01-11-2018 IPR036794 ATP synthase delta/epsilon subunit, C-terminal domain superfamily Reactome: R-HSA-163210|Reactome: R-HSA-8949613 CDA09_00500 97c76fd55b053d27be87af5acbdc147b 141 Gene3D G3DSA:2.60.15.10 3 91 4.7E-29 T 01-11-2018 IPR036771 F0F1 ATP synthase delta/epsilon subunit, N-terminal Reactome: R-HSA-163210|Reactome: R-HSA-8949613 CDA09_00500 97c76fd55b053d27be87af5acbdc147b 141 ProDom PD000944 ATP SYNTHASE ION EPSILON SUBUNIT HYDROLASE CF1 SYNTHESIS CHAIN HYDROGEN 10 91 8.0E-38 T 01-11-2018 IPR020546 ATP synthase, F1 complex, delta/epsilon subunit, N-terminal GO:0015986 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 CDA09_00500 97c76fd55b053d27be87af5acbdc147b 141 Hamap MF_00530 ATP synthase epsilon chain [atpC]. 3 132 21.43 T 01-11-2018 IPR001469 ATP synthase, F1 complex, delta/epsilon subunit GO:0015986|GO:0045261|GO:0046933 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 CDA09_00500 97c76fd55b053d27be87af5acbdc147b 141 TIGRFAM TIGR01216 ATP_synt_epsi: ATP synthase F1, epsilon subunit 4 133 2.4E-42 T 01-11-2018 IPR001469 ATP synthase, F1 complex, delta/epsilon subunit GO:0015986|GO:0045261|GO:0046933 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 CDA09_00500 97c76fd55b053d27be87af5acbdc147b 141 Gene3D G3DSA:1.20.5.440 92 134 5.1E-15 T 01-11-2018 CDA09_00500 97c76fd55b053d27be87af5acbdc147b 141 SUPERFAMILY SSF51344 4 87 1.24E-22 T 01-11-2018 IPR036771 F0F1 ATP synthase delta/epsilon subunit, N-terminal Reactome: R-HSA-163210|Reactome: R-HSA-8949613 CDA09_14595 76e4fff3f2570f3e0208ab94938a3c38 222 SMART SM00116 10 57 4.1E-6 T 01-11-2018 IPR000644 CBS domain CDA09_14595 76e4fff3f2570f3e0208ab94938a3c38 222 SMART SM00116 84 131 4.3E-4 T 01-11-2018 IPR000644 CBS domain CDA09_14595 76e4fff3f2570f3e0208ab94938a3c38 222 Gene3D G3DSA:3.10.580.10 1 132 1.9E-26 T 01-11-2018 CDA09_14595 76e4fff3f2570f3e0208ab94938a3c38 222 Pfam PF00571 CBS domain 4 55 5.6E-9 T 01-11-2018 IPR000644 CBS domain CDA09_14595 76e4fff3f2570f3e0208ab94938a3c38 222 Pfam PF00571 CBS domain 77 123 4.9E-7 T 01-11-2018 IPR000644 CBS domain CDA09_14595 76e4fff3f2570f3e0208ab94938a3c38 222 SUPERFAMILY SSF54631 2 128 3.42E-25 T 01-11-2018 CDA09_19895 f176879d2f6fc531c580b82e843f8f7e 131 SUPERFAMILY SSF54593 4 127 1.88E-17 T 01-11-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase CDA09_19895 f176879d2f6fc531c580b82e843f8f7e 131 Gene3D G3DSA:3.10.180.10 2 124 1.0E-15 T 01-11-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase CDA09_19895 f176879d2f6fc531c580b82e843f8f7e 131 Pfam PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily 5 118 8.0E-5 T 01-11-2018 IPR004360 Glyoxalase/fosfomycin resistance/dioxygenase domain CDA09_20580 cf4a16fd47f076ea8ca000c3cbca1b0b 604 Pfam PF00664 ABC transporter transmembrane region 38 309 1.7E-39 T 01-11-2018 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0016021|GO:0042626|GO:0055085 CDA09_20580 cf4a16fd47f076ea8ca000c3cbca1b0b 604 SUPERFAMILY SSF52540 349 593 3.75E-92 T 01-11-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CDA09_20580 cf4a16fd47f076ea8ca000c3cbca1b0b 604 SMART SM00382 383 569 1.7E-19 T 01-11-2018 IPR003593 AAA+ ATPase domain CDA09_20580 cf4a16fd47f076ea8ca000c3cbca1b0b 604 SUPERFAMILY SSF90123 20 341 1.27E-64 T 01-11-2018 IPR036640 ABC transporter type 1, transmembrane domain superfamily GO:0005524|GO:0016021 CDA09_20580 cf4a16fd47f076ea8ca000c3cbca1b0b 604 Pfam PF00005 ABC transporter 374 523 2.3E-33 T 01-11-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 CDA09_20580 cf4a16fd47f076ea8ca000c3cbca1b0b 604 Gene3D G3DSA:1.20.1560.10 29 346 1.4E-116 T 01-11-2018 IPR036640 ABC transporter type 1, transmembrane domain superfamily GO:0005524|GO:0016021 CDA09_20580 cf4a16fd47f076ea8ca000c3cbca1b0b 604 Gene3D G3DSA:3.40.50.300 353 603 4.2E-96 T 01-11-2018 CDA09_20580 cf4a16fd47f076ea8ca000c3cbca1b0b 604 ProSitePatterns PS00211 ABC transporters family signature. 495 509 - T 01-11-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 CDA09_18050 23057425b42f868fd79f9035feb559d1 322 Gene3D G3DSA:3.90.226.10 1 318 1.8E-122 T 01-11-2018 CDA09_18050 23057425b42f868fd79f9035feb559d1 322 Pfam PF03255 Acetyl co-enzyme A carboxylase carboxyltransferase alpha subunit 5 148 2.6E-67 T 01-11-2018 IPR001095 Acetyl-CoA carboxylase, alpha subunit GO:0003989|GO:0006633|GO:0009317 MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6722 CDA09_18050 23057425b42f868fd79f9035feb559d1 322 SUPERFAMILY SSF52096 5 316 8.4E-105 T 01-11-2018 IPR029045 ClpP/crotonase-like domain superfamily CDA09_18050 23057425b42f868fd79f9035feb559d1 322 TIGRFAM TIGR00513 accA: acetyl-CoA carboxylase, carboxyl transferase, alpha subunit 2 319 4.0E-156 T 01-11-2018 IPR001095 Acetyl-CoA carboxylase, alpha subunit GO:0003989|GO:0006633|GO:0009317 MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6722 CDA09_18050 23057425b42f868fd79f9035feb559d1 322 PRINTS PR01069 Acetyl-CoA carboxylase carboxyl transferase alpha subunit signature 88 99 5.5E-48 T 01-11-2018 IPR001095 Acetyl-CoA carboxylase, alpha subunit GO:0003989|GO:0006633|GO:0009317 MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6722 CDA09_18050 23057425b42f868fd79f9035feb559d1 322 PRINTS PR01069 Acetyl-CoA carboxylase carboxyl transferase alpha subunit signature 153 166 5.5E-48 T 01-11-2018 IPR001095 Acetyl-CoA carboxylase, alpha subunit GO:0003989|GO:0006633|GO:0009317 MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6722 CDA09_18050 23057425b42f868fd79f9035feb559d1 322 PRINTS PR01069 Acetyl-CoA carboxylase carboxyl transferase alpha subunit signature 169 182 5.5E-48 T 01-11-2018 IPR001095 Acetyl-CoA carboxylase, alpha subunit GO:0003989|GO:0006633|GO:0009317 MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6722 CDA09_18050 23057425b42f868fd79f9035feb559d1 322 PRINTS PR01069 Acetyl-CoA carboxylase carboxyl transferase alpha subunit signature 197 206 5.5E-48 T 01-11-2018 IPR001095 Acetyl-CoA carboxylase, alpha subunit GO:0003989|GO:0006633|GO:0009317 MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6722 CDA09_18050 23057425b42f868fd79f9035feb559d1 322 PRINTS PR01069 Acetyl-CoA carboxylase carboxyl transferase alpha subunit signature 113 131 5.5E-48 T 01-11-2018 IPR001095 Acetyl-CoA carboxylase, alpha subunit GO:0003989|GO:0006633|GO:0009317 MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6722 CDA09_18050 23057425b42f868fd79f9035feb559d1 322 PRINTS PR01069 Acetyl-CoA carboxylase carboxyl transferase alpha subunit signature 134 150 5.5E-48 T 01-11-2018 IPR001095 Acetyl-CoA carboxylase, alpha subunit GO:0003989|GO:0006633|GO:0009317 MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6722 CDA09_18050 23057425b42f868fd79f9035feb559d1 322 Hamap MF_00823 Acetyl-coenzyme A carboxylase carboxyl transferase subunit alpha [accA]. 5 316 50.953 T 01-11-2018 IPR001095 Acetyl-CoA carboxylase, alpha subunit GO:0003989|GO:0006633|GO:0009317 MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6722 CDA09_16375 4a8ff14b226a611ec300e66b21d5ed36 404 Gene3D G3DSA:2.40.440.10 109 314 2.2E-17 T 01-11-2018 IPR038063 L,D-transpeptidase catalytic domain-like CDA09_16375 4a8ff14b226a611ec300e66b21d5ed36 404 SUPERFAMILY SSF54427 291 400 1.84E-8 T 01-11-2018 IPR032710 NTF2-like domain superfamily CDA09_16375 4a8ff14b226a611ec300e66b21d5ed36 404 Pfam PF03734 L,D-transpeptidase catalytic domain 142 276 3.5E-18 T 01-11-2018 IPR005490 L,D-transpeptidase catalytic domain GO:0016740 CDA09_16375 4a8ff14b226a611ec300e66b21d5ed36 404 SUPERFAMILY SSF141523 139 275 4.97E-16 T 01-11-2018 IPR038063 L,D-transpeptidase catalytic domain-like CDA09_21180 6fd4143529841e3b946389b0e1a85e72 370 Gene3D G3DSA:3.40.50.2300 145 273 3.6E-109 T 01-11-2018 CDA09_21180 6fd4143529841e3b946389b0e1a85e72 370 PRINTS PR00337 Leu/Ile/Val-binding protein family signature 254 272 2.3E-8 T 01-11-2018 IPR000709 Leu/Ile/Val-binding protein GO:0006865 CDA09_21180 6fd4143529841e3b946389b0e1a85e72 370 PRINTS PR00337 Leu/Ile/Val-binding protein family signature 331 346 2.3E-8 T 01-11-2018 IPR000709 Leu/Ile/Val-binding protein GO:0006865 CDA09_21180 6fd4143529841e3b946389b0e1a85e72 370 PRINTS PR00337 Leu/Ile/Val-binding protein family signature 46 62 2.3E-8 T 01-11-2018 IPR000709 Leu/Ile/Val-binding protein GO:0006865 CDA09_21180 6fd4143529841e3b946389b0e1a85e72 370 PRINTS PR00337 Leu/Ile/Val-binding protein family signature 24 40 2.3E-8 T 01-11-2018 IPR000709 Leu/Ile/Val-binding protein GO:0006865 CDA09_21180 6fd4143529841e3b946389b0e1a85e72 370 Pfam PF13458 Periplasmic binding protein 24 365 1.1E-68 T 01-11-2018 IPR028081 Leucine-binding protein domain CDA09_21180 6fd4143529841e3b946389b0e1a85e72 370 Gene3D G3DSA:3.40.50.2300 25 347 3.6E-109 T 01-11-2018 CDA09_21180 6fd4143529841e3b946389b0e1a85e72 370 SUPERFAMILY SSF53822 24 367 2.65E-102 T 01-11-2018 IPR028082 Periplasmic binding protein-like I CDA09_10310 f8600a73da9715b00fabc1e60a496c53 144 Pfam PF03928 Haem-degrading 11 135 6.4E-35 T 01-11-2018 IPR005624 Haem-degrading CDA09_10310 f8600a73da9715b00fabc1e60a496c53 144 SUPERFAMILY SSF143744 7 139 5.62E-40 T 01-11-2018 IPR038084 GlcG-like domain superfamily CDA09_10310 f8600a73da9715b00fabc1e60a496c53 144 Gene3D G3DSA:3.30.450.150 1 143 1.0E-45 T 01-11-2018 IPR038084 GlcG-like domain superfamily CDA09_11470 0e027822c6c5b816787e4574d72dff53 132 Gene3D G3DSA:1.10.760.10 35 129 2.4E-9 T 01-11-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 CDA09_11470 0e027822c6c5b816787e4574d72dff53 132 SUPERFAMILY SSF46626 6 121 1.17E-13 T 01-11-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 CDA09_11470 0e027822c6c5b816787e4574d72dff53 132 Pfam PF13442 Cytochrome C oxidase, cbb3-type, subunit III 41 114 5.0E-9 T 01-11-2018 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 Reactome: R-HSA-111457|Reactome: R-HSA-111458|Reactome: R-HSA-111459|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 CDA09_22475 fe561e932a269acee3da07f58f96fb33 547 Gene3D G3DSA:3.40.720.10 14 535 6.4E-182 T 01-11-2018 IPR017849 Alkaline phosphatase-like, alpha/beta/alpha GO:0003824 CDA09_22475 fe561e932a269acee3da07f58f96fb33 547 PIRSF PIRSF001492 9 546 6.3E-168 T 01-11-2018 IPR005995 Phosphoglycerate mutase, 2,3-bisphosphoglycerate-independent GO:0004619|GO:0006007 KEGG: 00010+5.4.2.12|KEGG: 00260+5.4.2.12|KEGG: 00680+5.4.2.12|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 CDA09_22475 fe561e932a269acee3da07f58f96fb33 547 TIGRFAM TIGR01307 pgm_bpd_ind: phosphoglycerate mutase (2,3-diphosphoglycerate-independent) 14 540 6.4E-128 T 01-11-2018 IPR005995 Phosphoglycerate mutase, 2,3-bisphosphoglycerate-independent GO:0004619|GO:0006007 KEGG: 00010+5.4.2.12|KEGG: 00260+5.4.2.12|KEGG: 00680+5.4.2.12|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 CDA09_22475 fe561e932a269acee3da07f58f96fb33 547 Pfam PF06415 BPG-independent PGAM N-terminus (iPGM_N) 94 315 1.2E-63 T 01-11-2018 IPR011258 BPG-independent PGAM, N-terminal GO:0004619|GO:0005737|GO:0006007|GO:0030145 KEGG: 00010+5.4.2.12|KEGG: 00260+5.4.2.12|KEGG: 00680+5.4.2.12|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 CDA09_22475 fe561e932a269acee3da07f58f96fb33 547 Gene3D G3DSA:3.40.1450.10 87 331 6.4E-182 T 01-11-2018 IPR036646 BPG-independent phosphoglycerate mutase, domain B superfamily GO:0004619|GO:0005737 KEGG: 00010+5.4.2.12|KEGG: 00260+5.4.2.12|KEGG: 00680+5.4.2.12|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 CDA09_22475 fe561e932a269acee3da07f58f96fb33 547 SUPERFAMILY SSF64158 87 324 7.98E-63 T 01-11-2018 IPR036646 BPG-independent phosphoglycerate mutase, domain B superfamily GO:0004619|GO:0005737 KEGG: 00010+5.4.2.12|KEGG: 00260+5.4.2.12|KEGG: 00680+5.4.2.12|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 CDA09_22475 fe561e932a269acee3da07f58f96fb33 547 Pfam PF01676 Metalloenzyme superfamily 14 535 3.0E-70 T 01-11-2018 IPR006124 Metalloenzyme GO:0003824|GO:0046872 CDA09_22475 fe561e932a269acee3da07f58f96fb33 547 SUPERFAMILY SSF53649 14 540 1.2E-51 T 01-11-2018 IPR017850 Alkaline-phosphatase-like, core domain superfamily GO:0003824 CDA09_13360 1c5aabc206a5c6023867063717088b24 187 SUPERFAMILY SSF46557 29 103 1.23E-25 T 01-11-2018 IPR036805 Transcription elongation factor, GreA/GreB, N-terminal domain superfamily GO:0003677|GO:0032784 CDA09_13360 1c5aabc206a5c6023867063717088b24 187 TIGRFAM TIGR01461 greB: transcription elongation factor GreB 29 186 1.4E-60 T 01-11-2018 IPR006358 Transcription elongation factor GreB GO:0003677|GO:0032784 CDA09_13360 1c5aabc206a5c6023867063717088b24 187 ProSitePatterns PS00829 Prokaryotic transcription elongation factors signature 1. 43 74 - T 01-11-2018 IPR018151 Transcription elongation factor, GreA/GreB, conserved site GO:0003677|GO:0032784 CDA09_13360 1c5aabc206a5c6023867063717088b24 187 Hamap MF_00105 Transcription elongation factor GreA [greA]. 28 185 26.8 T 01-11-2018 IPR028624 Transcription elongation factor GreA/GreB GO:0003677|GO:0032784|GO:0070063 CDA09_13360 1c5aabc206a5c6023867063717088b24 187 PIRSF PIRSF006092 27 187 7.9E-43 T 01-11-2018 IPR023459 Transcription elongation factor GreA/GreB family GO:0070063 CDA09_13360 1c5aabc206a5c6023867063717088b24 187 Pfam PF01272 Transcription elongation factor, GreA/GreB, C-term 110 186 7.3E-24 T 01-11-2018 IPR001437 Transcription elongation factor, GreA/GreB, C-terminal GO:0003677|GO:0032784 CDA09_13360 1c5aabc206a5c6023867063717088b24 187 Gene3D G3DSA:3.10.50.30 104 187 7.5E-27 T 01-11-2018 IPR036953 Transcription elongation factor GreA/GreB, C-terminal domain superfamily GO:0003677|GO:0032784 CDA09_13360 1c5aabc206a5c6023867063717088b24 187 Hamap MF_00930 Transcription elongation factor GreB [greB]. 27 187 50.952 T 01-11-2018 IPR006358 Transcription elongation factor GreB GO:0003677|GO:0032784 CDA09_13360 1c5aabc206a5c6023867063717088b24 187 Gene3D G3DSA:1.10.287.180 28 102 1.2E-26 T 01-11-2018 IPR036805 Transcription elongation factor, GreA/GreB, N-terminal domain superfamily GO:0003677|GO:0032784 CDA09_13360 1c5aabc206a5c6023867063717088b24 187 SUPERFAMILY SSF54534 110 186 2.09E-19 T 01-11-2018 CDA09_13360 1c5aabc206a5c6023867063717088b24 187 Pfam PF03449 Transcription elongation factor, N-terminal 30 100 1.9E-23 T 01-11-2018 IPR022691 Transcription elongation factor, GreA/GreB, N-terminal GO:0003677|GO:0032784 CDA09_14275 d8559df84e7a6a9a57664920b024e5ae 89 TIGRFAM TIGR00952 S15_bact: ribosomal protein uS15 5 89 3.3E-39 T 01-11-2018 IPR005290 Ribosomal protein S15, bacterial-type GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 CDA09_14275 d8559df84e7a6a9a57664920b024e5ae 89 ProSitePatterns PS00362 Ribosomal protein S15 signature. 39 69 - T 01-11-2018 IPR000589 Ribosomal protein S15 GO:0003735|GO:0005622|GO:0005840|GO:0006412 CDA09_14275 d8559df84e7a6a9a57664920b024e5ae 89 Gene3D G3DSA:1.10.287.10 2 89 5.4E-36 T 01-11-2018 CDA09_14275 d8559df84e7a6a9a57664920b024e5ae 89 SUPERFAMILY SSF47060 3 89 1.29E-35 T 01-11-2018 IPR009068 S15/NS1, RNA-binding CDA09_14275 d8559df84e7a6a9a57664920b024e5ae 89 Hamap MF_01343_B 30S ribosomal protein S15 [rpsO]. 3 89 21.914 T 01-11-2018 IPR005290 Ribosomal protein S15, bacterial-type GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 CDA09_14275 d8559df84e7a6a9a57664920b024e5ae 89 Pfam PF00312 Ribosomal protein S15 8 88 4.2E-38 T 01-11-2018 IPR000589 Ribosomal protein S15 GO:0003735|GO:0005622|GO:0005840|GO:0006412 CDA09_14275 d8559df84e7a6a9a57664920b024e5ae 89 ProDom PD157043 RIBOSOMAL S15 RIBONUCLEOPROTEIN RRNA-BINDING RNA-BINDING 30S CHLOROPLAST S15 MITOCHONDRIAL TYPE 11 88 5.0E-37 T 01-11-2018 CDA09_14275 d8559df84e7a6a9a57664920b024e5ae 89 SMART SM01387 8 88 7.7E-54 T 01-11-2018 IPR000589 Ribosomal protein S15 GO:0003735|GO:0005622|GO:0005840|GO:0006412 CDA09_20280 241554256bfdfe3b8c53df062b4c3b8d 528 SMART SM00028 111 144 20.0 T 01-11-2018 IPR019734 Tetratricopeptide repeat GO:0005515 CDA09_20280 241554256bfdfe3b8c53df062b4c3b8d 528 SMART SM00028 393 426 7.3 T 01-11-2018 IPR019734 Tetratricopeptide repeat GO:0005515 CDA09_20280 241554256bfdfe3b8c53df062b4c3b8d 528 Gene3D G3DSA:1.25.40.10 279 443 1.1E-6 T 01-11-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 CDA09_20280 241554256bfdfe3b8c53df062b4c3b8d 528 SUPERFAMILY SSF48452 108 338 1.43E-9 T 01-11-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 CDA09_20280 241554256bfdfe3b8c53df062b4c3b8d 528 Gene3D G3DSA:1.25.40.10 94 278 8.0E-9 T 01-11-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 CDA09_22700 1bb21d67ebc967ac7d5f73db6b307437 322 Pfam PF02653 Branched-chain amino acid transport system / permease component 30 297 4.4E-42 T 01-11-2018 IPR001851 ABC transporter, permease GO:0016020|GO:0022857|GO:0055085 CDA09_08255 eba608b505ed5b4ec99764c8f3d6990c 219 SUPERFAMILY SSF52540 5 217 7.31E-38 T 01-11-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CDA09_08255 eba608b505ed5b4ec99764c8f3d6990c 219 Gene3D G3DSA:3.40.50.300 4 216 7.4E-44 T 01-11-2018 CDA09_08255 eba608b505ed5b4ec99764c8f3d6990c 219 PIRSF PIRSF009320 4 219 8.0E-34 T 01-11-2018 CDA09_08255 eba608b505ed5b4ec99764c8f3d6990c 219 Pfam PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain 7 187 2.2E-16 T 01-11-2018 IPR002586 CobQ/CobB/MinD/ParA nucleotide binding domain CDA09_00605 39e0609ba7664ed9a473988fb79d0f82 285 Gene3D G3DSA:3.30.470.10 1 119 7.6E-32 T 01-11-2018 CDA09_00605 39e0609ba7664ed9a473988fb79d0f82 285 Gene3D G3DSA:3.20.10.10 120 283 2.0E-53 T 01-11-2018 CDA09_00605 39e0609ba7664ed9a473988fb79d0f82 285 SUPERFAMILY SSF56752 3 277 1.27E-74 T 01-11-2018 IPR036038 Aminotransferase-like, PLP-dependent enzymes GO:0003824 Reactome: R-HSA-70895 CDA09_00605 39e0609ba7664ed9a473988fb79d0f82 285 Pfam PF01063 Amino-transferase class IV 30 252 6.8E-43 T 01-11-2018 IPR001544 Aminotransferase class IV GO:0003824 Reactome: R-HSA-70895 CDA09_05505 3d79c85566dfe04693e364fc2e038fc5 197 SUPERFAMILY SSF54631 37 174 8.34E-10 T 01-11-2018 CDA09_05505 3d79c85566dfe04693e364fc2e038fc5 197 Gene3D G3DSA:3.10.580.10 20 178 1.7E-10 T 01-11-2018 CDA09_05550 8473b986ef1fe6b6b3699cb7a17135f8 130 ProSitePatterns PS00360 Ribosomal protein S9 signature. 69 87 - T 01-11-2018 IPR020574 Ribosomal protein S9, conserved site GO:0003735|GO:0005840|GO:0006412 CDA09_05550 8473b986ef1fe6b6b3699cb7a17135f8 130 SUPERFAMILY SSF54211 5 130 3.53E-47 T 01-11-2018 IPR020568 Ribosomal protein S5 domain 2-type fold CDA09_05550 8473b986ef1fe6b6b3699cb7a17135f8 130 Hamap MF_00532_B 30S ribosomal protein S9 [rpsI]. 1 130 32.689 T 01-11-2018 IPR023035 Ribosomal protein S9, bacterial/plastid CDA09_05550 8473b986ef1fe6b6b3699cb7a17135f8 130 Pfam PF00380 Ribosomal protein S9/S16 10 130 3.8E-45 T 01-11-2018 IPR000754 Ribosomal protein S9 GO:0003735|GO:0005840|GO:0006412 CDA09_05550 8473b986ef1fe6b6b3699cb7a17135f8 130 Gene3D G3DSA:3.30.230.10 1 130 4.8E-51 T 01-11-2018 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup CDA09_18920 976e36cf8cc8ec4a542488693d3727ac 408 SUPERFAMILY SSF56935 20 408 1.98E-20 T 01-11-2018 CDA09_05395 68daeb9b22b0c25cdcf7e4eba2fa6598 66 Pfam PF10276 Zinc-finger domain 32 55 6.8E-8 T 01-11-2018 IPR019401 Zinc finger, CHCC-type Reactome: R-HSA-611105|Reactome: R-HSA-6799198 CDA09_05395 68daeb9b22b0c25cdcf7e4eba2fa6598 66 Gene3D G3DSA:2.60.260.40 4 57 1.4E-9 T 01-11-2018 CDA09_00830 a361c710b36f8c77b288381e844db50f 192 Gene3D G3DSA:3.40.50.150 30 176 7.3E-12 T 01-11-2018 CDA09_00830 a361c710b36f8c77b288381e844db50f 192 SUPERFAMILY SSF53335 21 132 3.5E-13 T 01-11-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase CDA09_09635 be922dba4b10057241890e6fbeb2eb3d 312 Pfam PF00378 Enoyl-CoA hydratase/isomerase 36 94 7.0E-11 T 01-11-2018 IPR001753 Enoyl-CoA hydratase/isomerase GO:0003824 CDA09_09635 be922dba4b10057241890e6fbeb2eb3d 312 Pfam PF00378 Enoyl-CoA hydratase/isomerase 124 270 5.4E-26 T 01-11-2018 IPR001753 Enoyl-CoA hydratase/isomerase GO:0003824 CDA09_09635 be922dba4b10057241890e6fbeb2eb3d 312 SUPERFAMILY SSF52096 30 285 5.94E-64 T 01-11-2018 IPR029045 ClpP/crotonase-like domain superfamily CDA09_09635 be922dba4b10057241890e6fbeb2eb3d 312 Gene3D G3DSA:3.90.226.10 29 286 8.1E-83 T 01-11-2018 CDA09_06780 a1df79419108d0072518aeed4e79a3ca 252 ProSitePatterns PS01061 Flagella transport protein fliP family signature 2. 227 239 - T 01-11-2018 IPR005838 Type III secretion system inner membrane P protein GO:0009306|GO:0016020 CDA09_06780 a1df79419108d0072518aeed4e79a3ca 252 TIGRFAM TIGR01103 fliP: flagellar biosynthetic protein FliP 54 250 2.1E-88 T 01-11-2018 IPR005837 Flagellar transport protein FliP GO:0009306|GO:0016020 CDA09_06780 a1df79419108d0072518aeed4e79a3ca 252 Pfam PF00813 FliP family 54 246 2.4E-79 T 01-11-2018 IPR005838 Type III secretion system inner membrane P protein GO:0009306|GO:0016020 CDA09_06780 a1df79419108d0072518aeed4e79a3ca 252 ProSitePatterns PS01060 Flagella transport protein fliP family signature 1. 179 194 - T 01-11-2018 IPR005838 Type III secretion system inner membrane P protein GO:0009306|GO:0016020 CDA09_06780 a1df79419108d0072518aeed4e79a3ca 252 PRINTS PR00951 Flagellar biosynthetic protein FliP signature 110 122 1.9E-27 T 01-11-2018 IPR005837 Flagellar transport protein FliP GO:0009306|GO:0016020 CDA09_06780 a1df79419108d0072518aeed4e79a3ca 252 PRINTS PR00951 Flagellar biosynthetic protein FliP signature 122 136 1.9E-27 T 01-11-2018 IPR005837 Flagellar transport protein FliP GO:0009306|GO:0016020 CDA09_06780 a1df79419108d0072518aeed4e79a3ca 252 PRINTS PR00951 Flagellar biosynthetic protein FliP signature 150 162 1.9E-27 T 01-11-2018 IPR005837 Flagellar transport protein FliP GO:0009306|GO:0016020 CDA09_06780 a1df79419108d0072518aeed4e79a3ca 252 PRINTS PR00951 Flagellar biosynthetic protein FliP signature 172 184 1.9E-27 T 01-11-2018 IPR005837 Flagellar transport protein FliP GO:0009306|GO:0016020 CDA09_06780 a1df79419108d0072518aeed4e79a3ca 252 PRINTS PR00951 Flagellar biosynthetic protein FliP signature 240 250 1.9E-27 T 01-11-2018 IPR005837 Flagellar transport protein FliP GO:0009306|GO:0016020 CDA09_06780 a1df79419108d0072518aeed4e79a3ca 252 PRINTS PR00951 Flagellar biosynthetic protein FliP signature 50 59 1.9E-27 T 01-11-2018 IPR005837 Flagellar transport protein FliP GO:0009306|GO:0016020 CDA09_06780 a1df79419108d0072518aeed4e79a3ca 252 PRINTS PR01302 Type III secretion system inner membrane P protein family signature 200 221 3.4E-68 T 01-11-2018 IPR005838 Type III secretion system inner membrane P protein GO:0009306|GO:0016020 CDA09_06780 a1df79419108d0072518aeed4e79a3ca 252 PRINTS PR01302 Type III secretion system inner membrane P protein family signature 91 110 3.4E-68 T 01-11-2018 IPR005838 Type III secretion system inner membrane P protein GO:0009306|GO:0016020 CDA09_06780 a1df79419108d0072518aeed4e79a3ca 252 PRINTS PR01302 Type III secretion system inner membrane P protein family signature 179 199 3.4E-68 T 01-11-2018 IPR005838 Type III secretion system inner membrane P protein GO:0009306|GO:0016020 CDA09_06780 a1df79419108d0072518aeed4e79a3ca 252 PRINTS PR01302 Type III secretion system inner membrane P protein family signature 52 71 3.4E-68 T 01-11-2018 IPR005838 Type III secretion system inner membrane P protein GO:0009306|GO:0016020 CDA09_06780 a1df79419108d0072518aeed4e79a3ca 252 PRINTS PR01302 Type III secretion system inner membrane P protein family signature 224 249 3.4E-68 T 01-11-2018 IPR005838 Type III secretion system inner membrane P protein GO:0009306|GO:0016020 CDA09_06780 a1df79419108d0072518aeed4e79a3ca 252 PRINTS PR01302 Type III secretion system inner membrane P protein family signature 71 91 3.4E-68 T 01-11-2018 IPR005838 Type III secretion system inner membrane P protein GO:0009306|GO:0016020 CDA09_19095 120f1266aa8d0062df6f214cdf4b223a 90 Gene3D G3DSA:3.30.460.10 2 86 3.1E-6 T 01-11-2018 CDA09_19095 120f1266aa8d0062df6f214cdf4b223a 90 SUPERFAMILY SSF81301 2 86 1.1E-6 T 01-11-2018 CDA09_20850 58b68b2f493156c05d232f0b797043e2 108 Pfam PF02482 Sigma 54 modulation protein / S30EA ribosomal protein 3 91 3.0E-27 T 01-11-2018 IPR003489 Ribosome hibernation promoting factor/RaiA GO:0044238 CDA09_20850 58b68b2f493156c05d232f0b797043e2 108 Gene3D G3DSA:3.30.160.100 1 104 4.8E-36 T 01-11-2018 IPR036567 Ribosome hibernation promotion factor-like CDA09_20850 58b68b2f493156c05d232f0b797043e2 108 SUPERFAMILY SSF69754 1 102 1.96E-36 T 01-11-2018 IPR036567 Ribosome hibernation promotion factor-like CDA09_20850 58b68b2f493156c05d232f0b797043e2 108 TIGRFAM TIGR00741 yfiA: ribosomal subunit interface protein 1 98 1.7E-30 T 01-11-2018 IPR003489 Ribosome hibernation promoting factor/RaiA GO:0044238 CDA09_07960 d112bb92ff5dfdf66975cfff37418769 254 Gene3D G3DSA:3.40.50.300 7 238 1.4E-55 T 01-11-2018 CDA09_07960 d112bb92ff5dfdf66975cfff37418769 254 Pfam PF00005 ABC transporter 24 154 1.2E-25 T 01-11-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 CDA09_07960 d112bb92ff5dfdf66975cfff37418769 254 SMART SM00382 31 204 3.7E-14 T 01-11-2018 IPR003593 AAA+ ATPase domain CDA09_07960 d112bb92ff5dfdf66975cfff37418769 254 SUPERFAMILY SSF52540 16 219 2.78E-57 T 01-11-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CDA09_07960 d112bb92ff5dfdf66975cfff37418769 254 ProSitePatterns PS00211 ABC transporters family signature. 127 141 - T 01-11-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 CDA09_14745 9d367dd295cd3b5b312daaf19946508b 345 Pfam PF02653 Branched-chain amino acid transport system / permease component 107 330 1.0E-17 T 01-11-2018 IPR001851 ABC transporter, permease GO:0016020|GO:0022857|GO:0055085 CDA09_11240 ef2ed2dfce21e34e74d28b0e6d9e1b91 226 Gene3D G3DSA:3.30.70.1520 40 122 7.5E-55 T 01-11-2018 CDA09_11240 ef2ed2dfce21e34e74d28b0e6d9e1b91 226 Gene3D G3DSA:3.30.1360.120 33 200 7.5E-55 T 01-11-2018 IPR027266 GTP-binding protein TrmE/Glycine cleavage system T protein, domain 1 GO:0005515 CDA09_11240 ef2ed2dfce21e34e74d28b0e6d9e1b91 226 Pfam PF04268 Sarcosine oxidase, gamma subunit family 47 199 5.9E-40 T 01-11-2018 IPR007375 Sarcosine oxidase, gamma subunit KEGG: 00260+1.5.3.1|MetaCyc: PWY-3661|MetaCyc: PWY-4722 CDA09_11240 ef2ed2dfce21e34e74d28b0e6d9e1b91 226 SUPERFAMILY SSF103025 83 208 1.08E-20 T 01-11-2018 CDA09_22530 d0076d63ed9dff8421eff590233c21d5 259 Pfam PF07730 Histidine kinase 41 105 7.7E-12 T 01-11-2018 IPR011712 Signal transduction histidine kinase, subgroup 3, dimerisation and phosphoacceptor domain GO:0000155|GO:0000160|GO:0016021|GO:0046983 CDA09_22530 d0076d63ed9dff8421eff590233c21d5 259 SUPERFAMILY SSF55874 131 243 6.02E-13 T 01-11-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily CDA09_22530 d0076d63ed9dff8421eff590233c21d5 259 Gene3D G3DSA:3.30.565.10 110 245 2.5E-21 T 01-11-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily CDA09_09735 2f9a53209f91e0e42b7520de8a34280c 375 Pfam PF00378 Enoyl-CoA hydratase/isomerase 52 225 2.5E-30 T 01-11-2018 IPR001753 Enoyl-CoA hydratase/isomerase GO:0003824 CDA09_09735 2f9a53209f91e0e42b7520de8a34280c 375 TIGRFAM TIGR03200 dearomat_oah: 6-oxocyclohex-1-ene-1-carbonyl-CoA hydrolase 12 371 2.4E-168 T 01-11-2018 IPR017613 6-oxocyclohex-1-ene-1-carbonyl-CoA hydrolase KEGG: 00362+3.7.1.21 CDA09_09735 2f9a53209f91e0e42b7520de8a34280c 375 SUPERFAMILY SSF52096 51 337 1.15E-40 T 01-11-2018 IPR029045 ClpP/crotonase-like domain superfamily CDA09_09735 2f9a53209f91e0e42b7520de8a34280c 375 Gene3D G3DSA:3.90.226.10 40 232 5.3E-35 T 01-11-2018 CDA09_17310 79cf9bed4a7581886158e6cac5ff6d0b 288 Pfam PF00691 OmpA family 144 242 9.0E-20 T 01-11-2018 IPR006665 OmpA-like domain CDA09_17310 79cf9bed4a7581886158e6cac5ff6d0b 288 Pfam PF13677 Membrane MotB of proton-channel complex MotA/MotB 5 61 4.9E-21 T 01-11-2018 IPR025713 Motility protein B, N-terminal domain CDA09_17310 79cf9bed4a7581886158e6cac5ff6d0b 288 Gene3D G3DSA:3.30.1330.60 93 255 7.6E-46 T 01-11-2018 IPR036737 OmpA-like domain superfamily CDA09_17310 79cf9bed4a7581886158e6cac5ff6d0b 288 SUPERFAMILY SSF103088 134 248 1.24E-29 T 01-11-2018 IPR036737 OmpA-like domain superfamily CDA09_08615 77a7663c00d9e2ddfc2710e879c6ffbb 271 SUPERFAMILY SSF111364 35 259 3.27E-47 T 01-11-2018 IPR036777 Nucleoside-specific channel-forming protein, Tsx-like superfamily GO:0009279 CDA09_08615 77a7663c00d9e2ddfc2710e879c6ffbb 271 Pfam PF16412 Domain of unknown function (DUF5020) 58 251 1.1E-9 T 01-11-2018 CDA09_08615 77a7663c00d9e2ddfc2710e879c6ffbb 271 Gene3D G3DSA:2.40.230.20 30 262 8.7E-10 T 01-11-2018 IPR036777 Nucleoside-specific channel-forming protein, Tsx-like superfamily GO:0009279 CDA09_03650 bc4c62488c613a0fbc36c6b33c85f3ab 608 TIGRFAM TIGR03359 VI_chp_6: type VI secretion protein, TIGR03359 family 4 607 1.6E-199 T 01-11-2018 IPR010272 Type VI secretion system, TssF-like CDA09_03650 bc4c62488c613a0fbc36c6b33c85f3ab 608 Pfam PF05947 Type VI secretion system, TssF 5 605 1.4E-193 T 01-11-2018 IPR010272 Type VI secretion system, TssF-like CDA09_03650 bc4c62488c613a0fbc36c6b33c85f3ab 608 PIRSF PIRSF028304 1 607 6.8E-171 T 01-11-2018 IPR010272 Type VI secretion system, TssF-like CDA09_19005 f407accb02ef4853bdf114bb45c50808 157 Gene3D G3DSA:1.10.150.120 77 154 6.1E-24 T 01-11-2018 CDA09_19005 f407accb02ef4853bdf114bb45c50808 157 Pfam PF00111 2Fe-2S iron-sulfur cluster binding domain 5 59 7.6E-8 T 01-11-2018 IPR001041 2Fe-2S ferredoxin-type iron-sulfur binding domain GO:0009055|GO:0051536 CDA09_19005 f407accb02ef4853bdf114bb45c50808 157 Pfam PF01799 [2Fe-2S] binding domain 72 144 9.1E-24 T 01-11-2018 IPR002888 [2Fe-2S]-binding GO:0016491|GO:0046872|GO:0055114 CDA09_19005 f407accb02ef4853bdf114bb45c50808 157 Gene3D G3DSA:3.10.20.30 1 75 5.4E-28 T 01-11-2018 IPR012675 Beta-grasp domain superfamily CDA09_19005 f407accb02ef4853bdf114bb45c50808 157 SUPERFAMILY SSF47741 83 151 1.96E-28 T 01-11-2018 IPR036884 [2Fe-2S]-binding domain superfamily CDA09_19005 f407accb02ef4853bdf114bb45c50808 157 ProSitePatterns PS00197 2Fe-2S ferredoxin-type iron-sulfur binding region signature. 38 46 - T 01-11-2018 IPR006058 2Fe-2S ferredoxin, iron-sulphur binding site GO:0051537 CDA09_19005 f407accb02ef4853bdf114bb45c50808 157 SUPERFAMILY SSF54292 2 77 6.42E-26 T 01-11-2018 IPR036010 2Fe-2S ferredoxin-like superfamily GO:0009055|GO:0051536 CDA09_04180 5fe4634842895106a0d071e94c333aa0 179 Gene3D G3DSA:3.40.50.1000 3 179 3.5E-54 T 01-11-2018 IPR023214 HAD superfamily CDA09_04180 5fe4634842895106a0d071e94c333aa0 179 SUPERFAMILY SSF56784 1 175 3.6E-46 T 01-11-2018 IPR036412 HAD-like superfamily CDA09_04180 5fe4634842895106a0d071e94c333aa0 179 TIGRFAM TIGR01662 HAD-SF-IIIA: HAD hydrolase, family IIIA 4 146 5.9E-35 T 01-11-2018 IPR006549 HAD-superfamily hydrolase,subfamily IIIA Reactome: R-HSA-5649702 CDA09_04180 5fe4634842895106a0d071e94c333aa0 179 TIGRFAM TIGR01656 Histidinol-ppas: histidinol-phosphate phosphatase domain 5 147 5.5E-45 T 01-11-2018 IPR006543 Histidinol-phosphate phosphatase GO:0016791 CDA09_04180 5fe4634842895106a0d071e94c333aa0 179 PIRSF PIRSF004682 1 173 5.0E-54 T 01-11-2018 IPR004446 D,D-heptose 1,7-bisphosphate phosphatase GO:0005975|GO:0016791 CDA09_04180 5fe4634842895106a0d071e94c333aa0 179 Pfam PF13242 HAD-hyrolase-like 101 171 5.7E-12 T 01-11-2018 CDA09_09910 97a46f8c8a55e4c3975973e43d244414 262 SMART SM00893 31 220 2.5E-26 T 01-11-2018 IPR014730 Electron transfer flavoprotein, alpha/beta-subunit, N-terminal Reactome: R-HSA-611105 CDA09_09910 97a46f8c8a55e4c3975973e43d244414 262 SUPERFAMILY SSF52402 1 259 1.0E-54 T 01-11-2018 CDA09_09910 97a46f8c8a55e4c3975973e43d244414 262 Pfam PF01012 Electron transfer flavoprotein domain 42 215 4.6E-30 T 01-11-2018 IPR014730 Electron transfer flavoprotein, alpha/beta-subunit, N-terminal Reactome: R-HSA-611105 CDA09_09910 97a46f8c8a55e4c3975973e43d244414 262 PIRSF PIRSF000090 1 262 3.0E-54 T 01-11-2018 IPR012255 Electron transfer flavoprotein, beta subunit GO:0009055 Reactome: R-HSA-611105|Reactome: R-HSA-8876725 CDA09_09910 97a46f8c8a55e4c3975973e43d244414 262 Gene3D G3DSA:3.40.50.620 1 259 1.2E-67 T 01-11-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold CDA09_07755 d89943165f08067b0386a7b12e519897 146 Gene3D G3DSA:2.60.40.790 4 146 8.5E-28 T 01-11-2018 IPR008978 HSP20-like chaperone CDA09_07755 d89943165f08067b0386a7b12e519897 146 Pfam PF00011 Hsp20/alpha crystallin family 47 145 1.0E-19 T 01-11-2018 IPR002068 Alpha crystallin/Hsp20 domain CDA09_07755 d89943165f08067b0386a7b12e519897 146 SUPERFAMILY SSF49764 26 146 7.74E-30 T 01-11-2018 IPR008978 HSP20-like chaperone CDA09_05945 1febc1eca1bae5226ccbaf73065649a8 139 Pfam PF02472 Biopolymer transport protein ExbD/TolR 8 136 1.4E-26 T 01-11-2018 IPR003400 Biopolymer transport protein ExbD/TolR GO:0022857|GO:0055085 CDA09_05945 1febc1eca1bae5226ccbaf73065649a8 139 Gene3D G3DSA:3.30.420.270 61 133 1.1E-7 T 01-11-2018 CDA09_17420 eb59c7d56e24860dc5fb89d40441f677 218 TIGRFAM TIGR00080 pimt: protein-L-isoaspartate O-methyltransferase 15 216 3.6E-59 T 01-11-2018 IPR000682 Protein-L-isoaspartate(D-aspartate) O-methyltransferase GO:0004719|GO:0006464 CDA09_17420 eb59c7d56e24860dc5fb89d40441f677 218 Gene3D G3DSA:3.40.50.150 3 218 1.3E-69 T 01-11-2018 CDA09_17420 eb59c7d56e24860dc5fb89d40441f677 218 SUPERFAMILY SSF53335 16 216 2.68E-38 T 01-11-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase CDA09_17420 eb59c7d56e24860dc5fb89d40441f677 218 ProSitePatterns PS01279 Protein-L-isoaspartate(D-aspartate) O-methyltransferase signature. 141 156 - T 01-11-2018 IPR000682 Protein-L-isoaspartate(D-aspartate) O-methyltransferase GO:0004719|GO:0006464 CDA09_17420 eb59c7d56e24860dc5fb89d40441f677 218 Hamap MF_00090 Protein-L-isoaspartate O-methyltransferase [pcm]. 10 217 33.776 T 01-11-2018 IPR000682 Protein-L-isoaspartate(D-aspartate) O-methyltransferase GO:0004719|GO:0006464 CDA09_17420 eb59c7d56e24860dc5fb89d40441f677 218 Pfam PF01135 Protein-L-isoaspartate(D-aspartate) O-methyltransferase (PCMT) 17 215 6.9E-57 T 01-11-2018 CDA09_14405 2ce214bbba5389fa05e59a2778bafad4 432 Pfam PF00999 Sodium/hydrogen exchanger family 11 425 6.4E-36 T 01-11-2018 IPR006153 Cation/H+ exchanger GO:0006812|GO:0015299|GO:0016021|GO:0055085 CDA09_14405 2ce214bbba5389fa05e59a2778bafad4 432 Gene3D G3DSA:1.20.1530.20 4 280 1.5E-13 T 01-11-2018 IPR038770 Sodium/solute symporter superfamily CDA09_20615 e4056f97f8badf4fac038d342837c868 256 Gene3D G3DSA:3.40.50.620 21 255 5.2E-68 T 01-11-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold CDA09_20615 e4056f97f8badf4fac038d342837c868 256 SUPERFAMILY SSF52402 33 214 1.19E-46 T 01-11-2018 CDA09_20615 e4056f97f8badf4fac038d342837c868 256 PIRSF PIRSF000857 14 256 2.8E-81 T 01-11-2018 IPR004511 Phosphoadenosine phosphosulphate/adenosine 5'-phosphosulphate reductase GO:0004604|GO:0019379|GO:0055114 KEGG: 00920+1.8.4.8 CDA09_20615 e4056f97f8badf4fac038d342837c868 256 TIGRFAM TIGR00434 cysH: phosophoadenylyl-sulfate reductase 43 252 2.3E-50 T 01-11-2018 IPR004511 Phosphoadenosine phosphosulphate/adenosine 5'-phosphosulphate reductase GO:0004604|GO:0019379|GO:0055114 KEGG: 00920+1.8.4.8 CDA09_20615 e4056f97f8badf4fac038d342837c868 256 Pfam PF01507 Phosphoadenosine phosphosulfate reductase family 53 227 4.6E-44 T 01-11-2018 IPR002500 Phosphoadenosine phosphosulphate reductase GO:0003824 Reactome: R-HSA-196843 CDA09_20615 e4056f97f8badf4fac038d342837c868 256 TIGRFAM TIGR02055 APS_reductase: adenylylsulfate reductase, thioredoxin dependent 58 251 4.9E-78 T 01-11-2018 IPR011798 Adenosine 5'-phosphosulphate reductase GO:0004604|GO:0019344|GO:0055114 KEGG: 00920+1.8.4.8 CDA09_21255 78a85c29728c8ac84f21ac69d23c5b0c 413 Gene3D G3DSA:3.40.50.1100 56 153 1.1E-104 T 01-11-2018 CDA09_21255 78a85c29728c8ac84f21ac69d23c5b0c 413 ProSitePatterns PS00165 Serine/threonine dehydratases pyridoxal-phosphate attachment site. 48 61 - T 01-11-2018 IPR000634 Serine/threonine dehydratase, pyridoxal-phosphate-binding site GO:0006520|GO:0030170 CDA09_21255 78a85c29728c8ac84f21ac69d23c5b0c 413 Gene3D G3DSA:3.40.50.1100 15 317 1.1E-104 T 01-11-2018 CDA09_21255 78a85c29728c8ac84f21ac69d23c5b0c 413 TIGRFAM TIGR01127 ilvA_1Cterm: threonine ammonia-lyase 35 407 4.0E-124 T 01-11-2018 IPR005789 Threonine dehydratase, catabolic GO:0004794|GO:0006567 KEGG: 00260+4.3.1.19|KEGG: 00290+4.3.1.19 CDA09_21255 78a85c29728c8ac84f21ac69d23c5b0c 413 SUPERFAMILY SSF53686 10 361 2.1E-88 T 01-11-2018 IPR036052 Tryptophan synthase beta subunit-like PLP-dependent enzyme CDA09_21255 78a85c29728c8ac84f21ac69d23c5b0c 413 Pfam PF00291 Pyridoxal-phosphate dependent enzyme 29 312 3.4E-78 T 01-11-2018 IPR001926 Pyridoxal-phosphate dependent enzyme CDA09_08215 e5e5de5e09eb6f08a2da7f685dbd9a49 230 Gene3D G3DSA:1.20.120.1630 8 208 1.1E-21 T 01-11-2018 CDA09_08215 e5e5de5e09eb6f08a2da7f685dbd9a49 230 Pfam PF04191 Phospholipid methyltransferase 102 193 8.0E-8 T 01-11-2018 IPR007318 Phospholipid methyltransferase KEGG: 00564+2.1.1.17|MetaCyc: PWY-6825|Reactome: R-HSA-1483191 CDA09_14540 0c24747577ac75a81f4182822cca4ab3 599 SMART SM00283 164 425 1.1E-44 T 01-11-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 CDA09_14540 0c24747577ac75a81f4182822cca4ab3 599 SUPERFAMILY SSF58104 117 435 1.24E-61 T 01-11-2018 CDA09_14540 0c24747577ac75a81f4182822cca4ab3 599 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 185 214 1.2E-21 T 01-11-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 CDA09_14540 0c24747577ac75a81f4182822cca4ab3 599 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 262 289 1.2E-21 T 01-11-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 CDA09_14540 0c24747577ac75a81f4182822cca4ab3 599 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 291 320 1.2E-21 T 01-11-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 CDA09_14540 0c24747577ac75a81f4182822cca4ab3 599 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 236 392 3.1E-35 T 01-11-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 CDA09_14540 0c24747577ac75a81f4182822cca4ab3 599 SMART SM00304 95 149 4.7E-9 T 01-11-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 CDA09_14540 0c24747577ac75a81f4182822cca4ab3 599 SMART SM00304 191 244 82.0 T 01-11-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 CDA09_14540 0c24747577ac75a81f4182822cca4ab3 599 SMART SM00304 257 317 29.0 T 01-11-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 CDA09_14540 0c24747577ac75a81f4182822cca4ab3 599 Gene3D G3DSA:1.10.287.950 95 427 4.2E-64 T 01-11-2018 CDA09_09755 3ca0b49db37dbb694a28b4ba0c89cf4f 489 SUPERFAMILY SSF56425 301 414 1.84E-26 T 01-11-2018 IPR027477 Succinate dehydrogenase/fumarate reductase flavoprotein, catalytic domain superfamily Reactome: R-HSA-611105|Reactome: R-HSA-71403 CDA09_09755 3ca0b49db37dbb694a28b4ba0c89cf4f 489 Gene3D G3DSA:3.50.50.60 22 483 4.5E-139 T 01-11-2018 IPR036188 FAD/NAD(P)-binding domain superfamily CDA09_09755 3ca0b49db37dbb694a28b4ba0c89cf4f 489 Pfam PF00890 FAD binding domain 24 458 3.3E-53 T 01-11-2018 IPR003953 FAD-dependent oxidoreductase 2, FAD binding domain Reactome: R-HSA-611105|Reactome: R-HSA-71403 CDA09_09755 3ca0b49db37dbb694a28b4ba0c89cf4f 489 Gene3D G3DSA:3.90.700.10 296 418 4.5E-139 T 01-11-2018 IPR027477 Succinate dehydrogenase/fumarate reductase flavoprotein, catalytic domain superfamily Reactome: R-HSA-611105|Reactome: R-HSA-71403 CDA09_09755 3ca0b49db37dbb694a28b4ba0c89cf4f 489 SUPERFAMILY SSF51905 14 488 5.9E-46 T 01-11-2018 IPR036188 FAD/NAD(P)-binding domain superfamily CDA09_04230 3dc6fd28ef4a4065f854c541e0d8770d 272 Gene3D G3DSA:3.40.50.300 7 252 1.3E-66 T 01-11-2018 CDA09_04230 3dc6fd28ef4a4065f854c541e0d8770d 272 ProSitePatterns PS00211 ABC transporters family signature. 146 160 - T 01-11-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 CDA09_04230 3dc6fd28ef4a4065f854c541e0d8770d 272 Pfam PF00005 ABC transporter 25 174 6.2E-27 T 01-11-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 CDA09_04230 3dc6fd28ef4a4065f854c541e0d8770d 272 SMART SM00382 34 223 2.6E-12 T 01-11-2018 IPR003593 AAA+ ATPase domain CDA09_04230 3dc6fd28ef4a4065f854c541e0d8770d 272 SUPERFAMILY SSF52540 9 237 1.52E-64 T 01-11-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CDA09_01840 5c3178f8d7181c288d5319991e57b0f6 384 SUPERFAMILY SSF55874 193 339 3.72E-10 T 01-11-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily CDA09_01840 5c3178f8d7181c288d5319991e57b0f6 384 Pfam PF13188 PAS domain 4 50 3.4E-8 T 01-11-2018 IPR000014 PAS domain CDA09_01840 5c3178f8d7181c288d5319991e57b0f6 384 Gene3D G3DSA:3.30.565.10 182 340 6.9E-12 T 01-11-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily CDA09_01840 5c3178f8d7181c288d5319991e57b0f6 384 SUPERFAMILY SSF55785 4 54 2.28E-6 T 01-11-2018 IPR035965 PAS domain superfamily CDA09_05670 3f7ea3eac34f702659b6fda03bd94fda 224 Pfam PF02798 Glutathione S-transferase, N-terminal domain 2 72 9.7E-14 T 01-11-2018 IPR004045 Glutathione S-transferase, N-terminal GO:0005515 CDA09_05670 3f7ea3eac34f702659b6fda03bd94fda 224 SUPERFAMILY SSF52833 1 78 3.8E-19 T 01-11-2018 IPR036249 Thioredoxin-like superfamily CDA09_05670 3f7ea3eac34f702659b6fda03bd94fda 224 SUPERFAMILY SSF47616 92 204 4.59E-19 T 01-11-2018 IPR036282 Glutathione S-transferase, C-terminal domain superfamily CDA09_05670 3f7ea3eac34f702659b6fda03bd94fda 224 Gene3D G3DSA:1.20.1050.130 1 209 1.8E-38 T 01-11-2018 CDA09_14020 ff23364d6c67b4e11a433d9745554944 76 Pfam PF11660 Protein of unknown function (DUF3262) 1 37 1.4E-6 T 01-11-2018 IPR021676 Protein of unknown function DUF3262 CDA09_10160 ae942576ee5247a7013efc81ad696d79 261 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 159 250 5.3E-18 T 01-11-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 CDA09_10160 ae942576ee5247a7013efc81ad696d79 261 SUPERFAMILY SSF58104 68 250 1.44E-24 T 01-11-2018 CDA09_10160 ae942576ee5247a7013efc81ad696d79 261 Gene3D G3DSA:1.10.287.950 33 260 3.7E-24 T 01-11-2018 CDA09_06035 148c238e3da38ed6121817e8b318c37b 269 SUPERFAMILY SSF52540 3 225 1.03E-56 T 01-11-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CDA09_06035 148c238e3da38ed6121817e8b318c37b 269 Gene3D G3DSA:3.40.50.300 1 242 3.7E-59 T 01-11-2018 CDA09_06035 148c238e3da38ed6121817e8b318c37b 269 Pfam PF00005 ABC transporter 21 170 3.2E-27 T 01-11-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 CDA09_06035 148c238e3da38ed6121817e8b318c37b 269 SMART SM00382 29 219 1.4E-12 T 01-11-2018 IPR003593 AAA+ ATPase domain CDA09_04415 670edd80f9c7fd043cdfd1200398831c 329 Pfam PF13413 Helix-turn-helix domain 22 82 5.6E-21 T 01-11-2018 CDA09_04415 670edd80f9c7fd043cdfd1200398831c 329 Pfam PF13464 Domain of unknown function (DUF4115) 255 328 2.4E-23 T 01-11-2018 IPR025194 Domain of unknown function DUF4115 CDA09_04415 670edd80f9c7fd043cdfd1200398831c 329 Gene3D G3DSA:1.10.260.40 11 101 8.4E-23 T 01-11-2018 CDA09_04415 670edd80f9c7fd043cdfd1200398831c 329 SUPERFAMILY SSF47413 18 86 1.04E-5 T 01-11-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 CDA09_04245 216118189723104349b31f3c7c042039 255 Pfam PF04333 MlaA lipoprotein 33 225 2.5E-70 T 01-11-2018 IPR007428 MlaA lipoprotein GO:0016020 CDA09_04245 216118189723104349b31f3c7c042039 255 PRINTS PR01805 VacJ lipoprotein signature 102 119 1.2E-23 T 01-11-2018 IPR007428 MlaA lipoprotein GO:0016020 CDA09_04245 216118189723104349b31f3c7c042039 255 PRINTS PR01805 VacJ lipoprotein signature 138 155 1.2E-23 T 01-11-2018 IPR007428 MlaA lipoprotein GO:0016020 CDA09_04245 216118189723104349b31f3c7c042039 255 PRINTS PR01805 VacJ lipoprotein signature 51 67 1.2E-23 T 01-11-2018 IPR007428 MlaA lipoprotein GO:0016020 CDA09_04245 216118189723104349b31f3c7c042039 255 PRINTS PR01805 VacJ lipoprotein signature 34 47 1.2E-23 T 01-11-2018 IPR007428 MlaA lipoprotein GO:0016020 CDA09_11360 811e4a9ced7855e6dd0200b5ddfbd6b9 227 Pfam PF04476 4-HFC-P synthase 3 220 9.0E-52 T 01-11-2018 IPR007565 (5-formylfuran-3-yl)methyl phosphate synthase KEGG: 00680+4.2.3.153|MetaCyc: PWY-5254 CDA09_11360 811e4a9ced7855e6dd0200b5ddfbd6b9 227 SUPERFAMILY SSF51569 11 117 3.66E-5 T 01-11-2018 CDA09_11360 811e4a9ced7855e6dd0200b5ddfbd6b9 227 PIRSF PIRSF015957 1 227 5.3E-34 T 01-11-2018 IPR007565 (5-formylfuran-3-yl)methyl phosphate synthase KEGG: 00680+4.2.3.153|MetaCyc: PWY-5254 CDA09_03705 d30273e19325e806ad5de31fcd14315d 120 SMART SM00528 72 117 4.3E-6 T 01-11-2018 IPR027444 Histone-like protein H-NS, C-terminal domain GO:0003677 CDA09_03705 d30273e19325e806ad5de31fcd14315d 120 SUPERFAMILY SSF81273 76 113 3.1E-9 T 01-11-2018 CDA09_03705 d30273e19325e806ad5de31fcd14315d 120 Gene3D G3DSA:4.10.430.10 61 117 1.3E-9 T 01-11-2018 IPR037150 Histone-like protein H-NS, C-terminal domain superfamily GO:0003677 CDA09_03705 d30273e19325e806ad5de31fcd14315d 120 Pfam PF00816 H-NS histone family 10 110 7.3E-24 T 01-11-2018 IPR001801 Histone-like protein H-NS GO:0003677|GO:0005622|GO:0006355 CDA09_05570 f41ac846db1bb461b83f0fd35c509a71 439 Gene3D G3DSA:2.70.70.10 273 403 8.6E-93 T 01-11-2018 IPR011055 Duplicated hybrid motif CDA09_05570 f41ac846db1bb461b83f0fd35c509a71 439 Gene3D G3DSA:3.10.450.350 66 147 9.9E-11 T 01-11-2018 CDA09_05570 f41ac846db1bb461b83f0fd35c509a71 439 Gene3D G3DSA:3.10.450.350 176 418 8.6E-93 T 01-11-2018 CDA09_05570 f41ac846db1bb461b83f0fd35c509a71 439 SUPERFAMILY SSF51261 151 399 1.57E-69 T 01-11-2018 IPR011055 Duplicated hybrid motif CDA09_05570 f41ac846db1bb461b83f0fd35c509a71 439 Pfam PF01551 Peptidase family M23 301 397 4.4E-33 T 01-11-2018 IPR016047 Peptidase M23 CDA09_11945 c740fc0fc41a53573c7f544577ae172e 201 Gene3D G3DSA:1.10.760.10 34 189 1.8E-46 T 01-11-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 CDA09_11945 c740fc0fc41a53573c7f544577ae172e 201 SUPERFAMILY SSF46626 17 184 1.51E-21 T 01-11-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 CDA09_11945 c740fc0fc41a53573c7f544577ae172e 201 Pfam PF02433 Cytochrome C oxidase, mono-heme subunit/FixO 3 145 2.2E-35 T 01-11-2018 IPR003468 Cytochrome c oxidase, monohaem subunit/FixO CDA09_20175 e9064a5b5028c6cdb46c36d93f142b4d 389 Gene3D G3DSA:1.20.1250.20 6 187 4.9E-17 T 01-11-2018 CDA09_20175 e9064a5b5028c6cdb46c36d93f142b4d 389 Gene3D G3DSA:1.20.1250.20 209 387 6.6E-13 T 01-11-2018 CDA09_20175 e9064a5b5028c6cdb46c36d93f142b4d 389 Pfam PF07690 Major Facilitator Superfamily 210 387 6.8E-10 T 01-11-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 CDA09_20175 e9064a5b5028c6cdb46c36d93f142b4d 389 SUPERFAMILY SSF103473 6 385 1.06E-32 T 01-11-2018 IPR036259 MFS transporter superfamily CDA09_00865 bf487792047b03cb385657c185d45c7e 367 SUPERFAMILY SSF53850 29 364 3.42E-87 T 01-11-2018 CDA09_00865 bf487792047b03cb385657c185d45c7e 367 Pfam PF13416 Bacterial extracellular solute-binding protein 45 331 9.0E-25 T 01-11-2018 IPR006059 Bacterial extracellular solute-binding protein CDA09_00865 bf487792047b03cb385657c185d45c7e 367 PIRSF PIRSF019574 3 367 9.0E-112 T 01-11-2018 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 CDA09_00865 bf487792047b03cb385657c185d45c7e 367 Gene3D G3DSA:3.40.190.10 135 361 1.1E-112 T 01-11-2018 CDA09_00865 bf487792047b03cb385657c185d45c7e 367 Gene3D G3DSA:3.40.190.10 31 335 1.1E-112 T 01-11-2018 CDA09_00865 bf487792047b03cb385657c185d45c7e 367 PRINTS PR00909 Bacterial periplasmic spermidine/putrescine-binding protein signature 77 91 9.9E-41 T 01-11-2018 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 CDA09_00865 bf487792047b03cb385657c185d45c7e 367 PRINTS PR00909 Bacterial periplasmic spermidine/putrescine-binding protein signature 157 171 9.9E-41 T 01-11-2018 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 CDA09_00865 bf487792047b03cb385657c185d45c7e 367 PRINTS PR00909 Bacterial periplasmic spermidine/putrescine-binding protein signature 180 199 9.9E-41 T 01-11-2018 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 CDA09_00865 bf487792047b03cb385657c185d45c7e 367 PRINTS PR00909 Bacterial periplasmic spermidine/putrescine-binding protein signature 93 106 9.9E-41 T 01-11-2018 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 CDA09_00865 bf487792047b03cb385657c185d45c7e 367 PRINTS PR00909 Bacterial periplasmic spermidine/putrescine-binding protein signature 50 71 9.9E-41 T 01-11-2018 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 CDA09_00865 bf487792047b03cb385657c185d45c7e 367 PRINTS PR00909 Bacterial periplasmic spermidine/putrescine-binding protein signature 311 337 9.9E-41 T 01-11-2018 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 CDA09_00865 bf487792047b03cb385657c185d45c7e 367 PRINTS PR00909 Bacterial periplasmic spermidine/putrescine-binding protein signature 266 285 9.9E-41 T 01-11-2018 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 CDA09_00865 bf487792047b03cb385657c185d45c7e 367 PRINTS PR00909 Bacterial periplasmic spermidine/putrescine-binding protein signature 126 142 9.9E-41 T 01-11-2018 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 CDA09_00865 bf487792047b03cb385657c185d45c7e 367 PRINTS PR00909 Bacterial periplasmic spermidine/putrescine-binding protein signature 34 50 9.9E-41 T 01-11-2018 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 CDA09_21720 f733269bb55325bd49f7678c4763a678 393 SUPERFAMILY SSF103473 7 390 5.75E-63 T 01-11-2018 IPR036259 MFS transporter superfamily CDA09_21720 f733269bb55325bd49f7678c4763a678 393 Pfam PF07690 Major Facilitator Superfamily 15 354 1.1E-47 T 01-11-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 CDA09_21720 f733269bb55325bd49f7678c4763a678 393 TIGRFAM TIGR00710 efflux_Bcr_CflA: drug resistance transporter, Bcr/CflA subfamily 7 375 9.7E-97 T 01-11-2018 IPR004812 Drug resistance transporter Bcr/CmlA subfamily GO:0006855|GO:0015238|GO:0016021 CDA09_21720 f733269bb55325bd49f7678c4763a678 393 Gene3D G3DSA:1.20.1720.10 7 388 1.1E-106 T 01-11-2018 CDA09_21720 f733269bb55325bd49f7678c4763a678 393 PRINTS PR01035 Tetracycline resistance protein signature 47 66 1.3E-5 T 01-11-2018 IPR001958 Tetracycline resistance protein TetA/multidrug resistance protein MdtG GO:0005215 CDA09_21720 f733269bb55325bd49f7678c4763a678 393 PRINTS PR01035 Tetracycline resistance protein signature 305 325 1.3E-5 T 01-11-2018 IPR001958 Tetracycline resistance protein TetA/multidrug resistance protein MdtG GO:0005215 CDA09_21720 f733269bb55325bd49f7678c4763a678 393 PRINTS PR01035 Tetracycline resistance protein signature 17 33 1.3E-5 T 01-11-2018 IPR001958 Tetracycline resistance protein TetA/multidrug resistance protein MdtG GO:0005215 CDA09_21720 f733269bb55325bd49f7678c4763a678 393 PRINTS PR01035 Tetracycline resistance protein signature 132 154 1.3E-5 T 01-11-2018 IPR001958 Tetracycline resistance protein TetA/multidrug resistance protein MdtG GO:0005215 CDA09_17325 0b2a2bf091cd2ec2a0856b523aab1b71 271 Gene3D G3DSA:3.40.50.300 34 253 2.2E-14 T 01-11-2018 CDA09_17325 0b2a2bf091cd2ec2a0856b523aab1b71 271 SUPERFAMILY SSF52540 37 253 3.82E-10 T 01-11-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CDA09_03290 d3e469affbbb2241a5458871ba36a76a 621 SMART SM00861 317 481 1.1E-76 T 01-11-2018 IPR005475 Transketolase-like, pyrimidine-binding domain CDA09_03290 d3e469affbbb2241a5458871ba36a76a 621 SUPERFAMILY SSF52922 489 615 7.59E-29 T 01-11-2018 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II GO:0003824 CDA09_03290 d3e469affbbb2241a5458871ba36a76a 621 SUPERFAMILY SSF52518 315 502 5.89E-64 T 01-11-2018 IPR029061 Thiamin diphosphate-binding fold CDA09_03290 d3e469affbbb2241a5458871ba36a76a 621 Pfam PF13292 1-deoxy-D-xylulose-5-phosphate synthase 7 280 6.7E-119 T 01-11-2018 IPR005477 Deoxyxylulose-5-phosphate synthase GO:0008661|GO:0016114 KEGG: 00730+2.2.1.7|KEGG: 00900+2.2.1.7|MetaCyc: PWY-6891|MetaCyc: PWY-6892|MetaCyc: PWY-7560 CDA09_03290 d3e469affbbb2241a5458871ba36a76a 621 Gene3D G3DSA:3.40.50.970 314 488 2.0E-71 T 01-11-2018 CDA09_03290 d3e469affbbb2241a5458871ba36a76a 621 SUPERFAMILY SSF52518 3 379 1.54E-75 T 01-11-2018 IPR029061 Thiamin diphosphate-binding fold CDA09_03290 d3e469affbbb2241a5458871ba36a76a 621 Pfam PF02780 Transketolase, C-terminal domain 493 609 2.6E-23 T 01-11-2018 IPR033248 Transketolase, C-terminal domain CDA09_03290 d3e469affbbb2241a5458871ba36a76a 621 Pfam PF02779 Transketolase, pyrimidine binding domain 316 477 8.1E-45 T 01-11-2018 IPR005475 Transketolase-like, pyrimidine-binding domain CDA09_03290 d3e469affbbb2241a5458871ba36a76a 621 TIGRFAM TIGR00204 dxs: 1-deoxy-D-xylulose-5-phosphate synthase 8 614 3.0E-260 T 01-11-2018 IPR005477 Deoxyxylulose-5-phosphate synthase GO:0008661|GO:0016114 KEGG: 00730+2.2.1.7|KEGG: 00900+2.2.1.7|MetaCyc: PWY-6891|MetaCyc: PWY-6892|MetaCyc: PWY-7560 CDA09_03290 d3e469affbbb2241a5458871ba36a76a 621 ProSitePatterns PS00802 Transketolase signature 2. 423 439 - T 01-11-2018 IPR020826 Transketolase binding site KEGG: 00730+2.2.1.7|KEGG: 00900+2.2.1.7|MetaCyc: PWY-6891|MetaCyc: PWY-6892|MetaCyc: PWY-7560 CDA09_03290 d3e469affbbb2241a5458871ba36a76a 621 Hamap MF_00315 1-deoxy-D-xylulose-5-phosphate synthase [dxs]. 6 618 46.012 T 01-11-2018 IPR005477 Deoxyxylulose-5-phosphate synthase GO:0008661|GO:0016114 KEGG: 00730+2.2.1.7|KEGG: 00900+2.2.1.7|MetaCyc: PWY-6891|MetaCyc: PWY-6892|MetaCyc: PWY-7560 CDA09_03290 d3e469affbbb2241a5458871ba36a76a 621 ProSitePatterns PS00801 Transketolase signature 1. 32 51 - T 01-11-2018 IPR005474 Transketolase, N-terminal KEGG: 00730+2.2.1.7|KEGG: 00900+2.2.1.7|MetaCyc: PWY-6891|MetaCyc: PWY-6892|MetaCyc: PWY-7560 CDA09_03290 d3e469affbbb2241a5458871ba36a76a 621 Gene3D G3DSA:3.40.50.920 493 618 2.9E-39 T 01-11-2018 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II GO:0003824 CDA09_03605 90cf40a7390bda5e1dbc53659423f9cc 931 SUPERFAMILY SSF69255 382 485 4.45E-21 T 01-11-2018 CDA09_03605 90cf40a7390bda5e1dbc53659423f9cc 931 Gene3D G3DSA:3.55.50.10 96 197 1.4E-78 T 01-11-2018 CDA09_03605 90cf40a7390bda5e1dbc53659423f9cc 931 Gene3D G3DSA:3.30.1920.30 231 295 1.4E-78 T 01-11-2018 CDA09_03605 90cf40a7390bda5e1dbc53659423f9cc 931 SUPERFAMILY SSF69279 204 379 1.7E-14 T 01-11-2018 CDA09_03605 90cf40a7390bda5e1dbc53659423f9cc 931 SUPERFAMILY SSF69349 475 538 1.1E-6 T 01-11-2018 CDA09_03605 90cf40a7390bda5e1dbc53659423f9cc 931 Gene3D G3DSA:2.30.110.50 14 340 1.4E-78 T 01-11-2018 CDA09_03605 90cf40a7390bda5e1dbc53659423f9cc 931 Pfam PF13296 Putative type VI secretion system Rhs element Vgr 520 624 6.7E-35 T 01-11-2018 IPR028244 Putative type VI secretion system, Rhs element associated Vgr domain CDA09_03605 90cf40a7390bda5e1dbc53659423f9cc 931 Pfam PF10106 Uncharacterized protein conserved in bacteria (DUF2345) 675 821 1.1E-45 T 01-11-2018 IPR018769 Domain of unknown function DUF2345, Vgr C-terminal CDA09_03605 90cf40a7390bda5e1dbc53659423f9cc 931 TIGRFAM TIGR03361 VI_Rhs_Vgr: type VI secretion system Vgr family protein 16 419 7.7E-69 T 01-11-2018 IPR017847 Type VI secretion system, RhsGE-associated Vgr family subset CDA09_03605 90cf40a7390bda5e1dbc53659423f9cc 931 SUPERFAMILY SSF69279 15 193 5.67E-48 T 01-11-2018 CDA09_03605 90cf40a7390bda5e1dbc53659423f9cc 931 Pfam PF05954 Phage late control gene D protein (GPD) 27 341 8.9E-75 T 01-11-2018 CDA09_03605 90cf40a7390bda5e1dbc53659423f9cc 931 TIGRFAM TIGR01646 vgr_GE: Rhs element Vgr protein 21 419 1.9E-56 T 01-11-2018 IPR006533 Type VI secretion system, RhsGE-associated Vgr protein CDA09_03605 90cf40a7390bda5e1dbc53659423f9cc 931 Gene3D G3DSA:2.40.50.230 372 489 4.0E-33 T 01-11-2018 IPR037026 Vgr protein, OB-fold domain superfamily CDA09_18400 e461c14425355e643a6d02ed6ec21940 344 Gene3D G3DSA:3.90.25.10 187 335 1.2E-144 T 01-11-2018 CDA09_18400 e461c14425355e643a6d02ed6ec21940 344 Gene3D G3DSA:3.40.50.720 4 321 1.2E-144 T 01-11-2018 CDA09_18400 e461c14425355e643a6d02ed6ec21940 344 TIGRFAM TIGR01472 gmd: GDP-mannose 4,6-dehydratase 2 336 3.2E-142 T 01-11-2018 IPR006368 GDP-mannose 4,6-dehydratase GO:0008446|GO:0019673 KEGG: 00051+4.2.1.47|KEGG: 00520+4.2.1.47|MetaCyc: PWY-5738|MetaCyc: PWY-5739|MetaCyc: PWY-5740|MetaCyc: PWY-66|MetaCyc: PWY-7573|Reactome: R-HSA-6787639 CDA09_18400 e461c14425355e643a6d02ed6ec21940 344 Hamap MF_00955 GDP-mannose 4,6-dehydratase [gmd]. 2 340 52.676 T 01-11-2018 IPR006368 GDP-mannose 4,6-dehydratase GO:0008446|GO:0019673 KEGG: 00051+4.2.1.47|KEGG: 00520+4.2.1.47|MetaCyc: PWY-5738|MetaCyc: PWY-5739|MetaCyc: PWY-5740|MetaCyc: PWY-66|MetaCyc: PWY-7573|Reactome: R-HSA-6787639 CDA09_18400 e461c14425355e643a6d02ed6ec21940 344 Pfam PF16363 GDP-mannose 4,6 dehydratase 5 330 3.6E-134 T 01-11-2018 IPR016040 NAD(P)-binding domain CDA09_18400 e461c14425355e643a6d02ed6ec21940 344 SUPERFAMILY SSF51735 2 333 3.02E-73 T 01-11-2018 IPR036291 NAD(P)-binding domain superfamily CDA09_07945 feaf5bae1aebbada28b22636ba3fd6b1 120 PIRSF PIRSF009151 1 120 1.8E-57 T 01-11-2018 IPR008497 Protein of unknown function DUF779 CDA09_07945 feaf5bae1aebbada28b22636ba3fd6b1 120 Pfam PF05610 Protein of unknown function (DUF779) 14 107 3.5E-46 T 01-11-2018 IPR008497 Protein of unknown function DUF779 CDA09_06825 f93817de4575bd8afc8309d1730aed3d 333 TIGRFAM TIGR00207 fliG: flagellar motor switch protein FliG 7 332 1.8E-104 T 01-11-2018 IPR000090 Flagellar motor switch protein FliG GO:0003774|GO:0006935|GO:0009288|GO:0071973 CDA09_06825 f93817de4575bd8afc8309d1730aed3d 333 Pfam PF01706 FliG C-terminal domain 217 323 2.4E-43 T 01-11-2018 IPR023087 Flagellar motor switch protein FliG, C-terminal CDA09_06825 f93817de4575bd8afc8309d1730aed3d 333 PIRSF PIRSF003161 2 333 2.2E-110 T 01-11-2018 IPR000090 Flagellar motor switch protein FliG GO:0003774|GO:0006935|GO:0009288|GO:0071973 CDA09_06825 f93817de4575bd8afc8309d1730aed3d 333 Gene3D G3DSA:1.10.220.30 2 86 2.6E-13 T 01-11-2018 CDA09_06825 f93817de4575bd8afc8309d1730aed3d 333 Pfam PF14841 FliG middle domain 118 186 4.6E-25 T 01-11-2018 IPR032779 Flagellar motor switch protein FliG, middle domain CDA09_06825 f93817de4575bd8afc8309d1730aed3d 333 SUPERFAMILY SSF48029 117 324 4.71E-68 T 01-11-2018 IPR011002 Flagellar motor switch protein FliG, alpha-helical CDA09_06825 f93817de4575bd8afc8309d1730aed3d 333 Pfam PF14842 FliG N-terminal domain 7 104 7.4E-23 T 01-11-2018 IPR028263 Flagellar motor switch protein FliG, N-terminal domain CDA09_06825 f93817de4575bd8afc8309d1730aed3d 333 PRINTS PR00954 Flagellar motor switch protein FliG signature 194 219 5.8E-62 T 01-11-2018 IPR000090 Flagellar motor switch protein FliG GO:0003774|GO:0006935|GO:0009288|GO:0071973 CDA09_06825 f93817de4575bd8afc8309d1730aed3d 333 PRINTS PR00954 Flagellar motor switch protein FliG signature 34 60 5.8E-62 T 01-11-2018 IPR000090 Flagellar motor switch protein FliG GO:0003774|GO:0006935|GO:0009288|GO:0071973 CDA09_06825 f93817de4575bd8afc8309d1730aed3d 333 PRINTS PR00954 Flagellar motor switch protein FliG signature 113 136 5.8E-62 T 01-11-2018 IPR000090 Flagellar motor switch protein FliG GO:0003774|GO:0006935|GO:0009288|GO:0071973 CDA09_06825 f93817de4575bd8afc8309d1730aed3d 333 PRINTS PR00954 Flagellar motor switch protein FliG signature 247 267 5.8E-62 T 01-11-2018 IPR000090 Flagellar motor switch protein FliG GO:0003774|GO:0006935|GO:0009288|GO:0071973 CDA09_06825 f93817de4575bd8afc8309d1730aed3d 333 PRINTS PR00954 Flagellar motor switch protein FliG signature 271 297 5.8E-62 T 01-11-2018 IPR000090 Flagellar motor switch protein FliG GO:0003774|GO:0006935|GO:0009288|GO:0071973 CDA09_06825 f93817de4575bd8afc8309d1730aed3d 333 PRINTS PR00954 Flagellar motor switch protein FliG signature 5 21 5.8E-62 T 01-11-2018 IPR000090 Flagellar motor switch protein FliG GO:0003774|GO:0006935|GO:0009288|GO:0071973 CDA09_06825 f93817de4575bd8afc8309d1730aed3d 333 PRINTS PR00954 Flagellar motor switch protein FliG signature 225 245 5.8E-62 T 01-11-2018 IPR000090 Flagellar motor switch protein FliG GO:0003774|GO:0006935|GO:0009288|GO:0071973 CDA09_06825 f93817de4575bd8afc8309d1730aed3d 333 Gene3D G3DSA:1.10.220.30 194 333 1.9E-48 T 01-11-2018 CDA09_06825 f93817de4575bd8afc8309d1730aed3d 333 Gene3D G3DSA:1.10.220.30 88 190 1.9E-26 T 01-11-2018 CDA09_06825 f93817de4575bd8afc8309d1730aed3d 333 SUPERFAMILY SSF48029 4 114 1.6E-18 T 01-11-2018 IPR011002 Flagellar motor switch protein FliG, alpha-helical CDA09_03560 b93e04c57c7a47f6c4840c42bc725909 141 Pfam PF07883 Cupin domain 47 118 4.4E-14 T 01-11-2018 IPR013096 Cupin 2, conserved barrel CDA09_03560 b93e04c57c7a47f6c4840c42bc725909 141 PIRSF PIRSF037087 1 140 1.7E-56 T 01-11-2018 IPR017102 Uncharacterised conserved protein UCP037087 CDA09_03560 b93e04c57c7a47f6c4840c42bc725909 141 SUPERFAMILY SSF51182 1 132 4.66E-26 T 01-11-2018 IPR011051 RmlC-like cupin domain superfamily CDA09_03560 b93e04c57c7a47f6c4840c42bc725909 141 Gene3D G3DSA:2.60.120.10 22 136 2.9E-21 T 01-11-2018 IPR014710 RmlC-like jelly roll fold CDA09_07500 18ea7551977513c63633eb1cdf77c6a4 194 Pfam PF14076 Domain of unknown function (DUF4258) 24 93 1.7E-7 T 01-11-2018 IPR025354 Protein of unknown function DUF4258 CDA09_07500 18ea7551977513c63633eb1cdf77c6a4 194 TIGRFAM TIGR03831 YgiT_finger: YgiT-type zinc finger domain 120 165 5.7E-13 T 01-11-2018 IPR022453 Zinc finger, MqsA-type CDA09_11905 d371e4b18c84b1f0d855d1b9b002805f 458 SUPERFAMILY SSF53955 83 239 3.8E-39 T 01-11-2018 IPR023346 Lysozyme-like domain superfamily CDA09_11905 d371e4b18c84b1f0d855d1b9b002805f 458 SUPERFAMILY SSF54106 309 355 1.05E-7 T 01-11-2018 CDA09_11905 d371e4b18c84b1f0d855d1b9b002805f 458 Gene3D G3DSA:1.10.530.10 82 228 2.9E-29 T 01-11-2018 CDA09_11905 d371e4b18c84b1f0d855d1b9b002805f 458 Gene3D G3DSA:3.10.350.10 300 360 2.8E-10 T 01-11-2018 IPR036779 LysM domain superfamily CDA09_11905 d371e4b18c84b1f0d855d1b9b002805f 458 Pfam PF01464 Transglycosylase SLT domain 93 191 2.0E-23 T 01-11-2018 IPR008258 Transglycosylase SLT domain 1 CDA09_11905 d371e4b18c84b1f0d855d1b9b002805f 458 SMART SM00257 311 355 5.3E-5 T 01-11-2018 IPR018392 LysM domain CDA09_11905 d371e4b18c84b1f0d855d1b9b002805f 458 ProSitePatterns PS00922 Prokaryotic transglycosylases signature. 104 132 - T 01-11-2018 IPR000189 Prokaryotic transglycosylase, active site GO:0000270|GO:0008933|GO:0016020 CDA09_11905 d371e4b18c84b1f0d855d1b9b002805f 458 Pfam PF01476 LysM domain 313 355 3.7E-6 T 01-11-2018 IPR018392 LysM domain CDA09_09750 e784f7e8a56ba2261cdf61a3935c7825 408 Pfam PF00724 NADH:flavin oxidoreductase / NADH oxidase family 8 253 4.2E-45 T 01-11-2018 IPR001155 NADH:flavin oxidoreductase/NADH oxidase, N-terminal GO:0010181|GO:0016491|GO:0055114 CDA09_09750 e784f7e8a56ba2261cdf61a3935c7825 408 Gene3D G3DSA:3.20.20.70 7 399 7.5E-97 T 01-11-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 CDA09_09750 e784f7e8a56ba2261cdf61a3935c7825 408 SUPERFAMILY SSF51395 8 392 5.8E-89 T 01-11-2018 CDA09_00280 db615eca432eec3e202d6308e75c1505 700 Pfam PF00512 His Kinase A (phospho-acceptor) domain 465 528 4.1E-17 T 01-11-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 CDA09_00280 db615eca432eec3e202d6308e75c1505 700 Gene3D G3DSA:1.10.287.130 439 525 6.9E-25 T 01-11-2018 CDA09_00280 db615eca432eec3e202d6308e75c1505 700 SUPERFAMILY SSF47384 457 527 1.79E-13 T 01-11-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 CDA09_00280 db615eca432eec3e202d6308e75c1505 700 Pfam PF17202 Single cache domain 3 230 339 1.1E-27 T 01-11-2018 IPR033463 Single cache domain 3 CDA09_00280 db615eca432eec3e202d6308e75c1505 700 SMART SM00388 463 530 1.2E-15 T 01-11-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 CDA09_00280 db615eca432eec3e202d6308e75c1505 700 SUPERFAMILY SSF158472 368 417 9.94E-9 T 01-11-2018 CDA09_00280 db615eca432eec3e202d6308e75c1505 700 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 576 682 1.1E-22 T 01-11-2018 IPR003594 Histidine kinase/HSP90-like ATPase CDA09_00280 db615eca432eec3e202d6308e75c1505 700 SUPERFAMILY SSF103190 194 333 2.67E-14 T 01-11-2018 IPR029151 Periplasmic sensor-like domain superfamily CDA09_00280 db615eca432eec3e202d6308e75c1505 700 Gene3D G3DSA:1.20.1480.50 337 426 3.6E-11 T 01-11-2018 CDA09_00280 db615eca432eec3e202d6308e75c1505 700 SMART SM00304 368 421 3.2E-7 T 01-11-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 CDA09_00280 db615eca432eec3e202d6308e75c1505 700 Gene3D G3DSA:3.30.565.10 533 689 6.9E-43 T 01-11-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily CDA09_00280 db615eca432eec3e202d6308e75c1505 700 PRINTS PR00344 Bacterial sensor protein C-terminal signature 615 629 6.3E-19 T 01-11-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 CDA09_00280 db615eca432eec3e202d6308e75c1505 700 PRINTS PR00344 Bacterial sensor protein C-terminal signature 645 663 6.3E-19 T 01-11-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 CDA09_00280 db615eca432eec3e202d6308e75c1505 700 PRINTS PR00344 Bacterial sensor protein C-terminal signature 633 643 6.3E-19 T 01-11-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 CDA09_00280 db615eca432eec3e202d6308e75c1505 700 PRINTS PR00344 Bacterial sensor protein C-terminal signature 669 682 6.3E-19 T 01-11-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 CDA09_00280 db615eca432eec3e202d6308e75c1505 700 Pfam PF00672 HAMP domain 368 417 9.1E-8 T 01-11-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 CDA09_00280 db615eca432eec3e202d6308e75c1505 700 SMART SM00387 573 685 4.3E-36 T 01-11-2018 IPR003594 Histidine kinase/HSP90-like ATPase CDA09_00280 db615eca432eec3e202d6308e75c1505 700 SUPERFAMILY SSF55874 521 681 2.23E-39 T 01-11-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily CDA09_01470 5967978d3169e96fa4850c7bb51dae91 100 Pfam PF13442 Cytochrome C oxidase, cbb3-type, subunit III 21 95 2.0E-17 T 01-11-2018 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 Reactome: R-HSA-111457|Reactome: R-HSA-111458|Reactome: R-HSA-111459|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 CDA09_01470 5967978d3169e96fa4850c7bb51dae91 100 Gene3D G3DSA:1.10.760.10 14 100 4.0E-31 T 01-11-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 CDA09_01470 5967978d3169e96fa4850c7bb51dae91 100 PRINTS PR00607 Class IE cytochrome C signature 85 96 1.6E-13 T 01-11-2018 IPR002323 Cytochrome c, class IE GO:0005506|GO:0009055|GO:0020037 CDA09_01470 5967978d3169e96fa4850c7bb51dae91 100 PRINTS PR00607 Class IE cytochrome C signature 42 52 1.6E-13 T 01-11-2018 IPR002323 Cytochrome c, class IE GO:0005506|GO:0009055|GO:0020037 CDA09_01470 5967978d3169e96fa4850c7bb51dae91 100 PRINTS PR00607 Class IE cytochrome C signature 31 42 1.6E-13 T 01-11-2018 IPR002323 Cytochrome c, class IE GO:0005506|GO:0009055|GO:0020037 CDA09_01470 5967978d3169e96fa4850c7bb51dae91 100 PRINTS PR00607 Class IE cytochrome C signature 70 82 1.6E-13 T 01-11-2018 IPR002323 Cytochrome c, class IE GO:0005506|GO:0009055|GO:0020037 CDA09_01470 5967978d3169e96fa4850c7bb51dae91 100 SUPERFAMILY SSF46626 21 98 9.74E-19 T 01-11-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 CDA09_14225 6a5166a649d5f37ac5e5ce4f35c0ccbb 189 SUPERFAMILY SSF109604 27 176 1.13E-13 T 01-11-2018 CDA09_14225 6a5166a649d5f37ac5e5ce4f35c0ccbb 189 Gene3D G3DSA:1.10.3210.10 26 182 1.6E-22 T 01-11-2018 CDA09_20970 5146415f6dad5fe0b6e43823f2b6df46 103 Pfam PF05957 Bacterial protein of unknown function (DUF883) 11 103 4.5E-31 T 01-11-2018 IPR010279 Inner membrane protein YqjD/ElaB GO:0043022 CDA09_12630 f4e845598ec2b7327523cc48b2407b09 150 Gene3D G3DSA:1.10.10.10 6 139 9.4E-28 T 01-11-2018 IPR036388 Winged helix-like DNA-binding domain superfamily CDA09_12630 f4e845598ec2b7327523cc48b2407b09 150 SUPERFAMILY SSF46785 25 144 7.81E-27 T 01-11-2018 IPR036390 Winged helix DNA-binding domain superfamily CDA09_12630 f4e845598ec2b7327523cc48b2407b09 150 SMART SM00347 27 127 4.1E-16 T 01-11-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 CDA09_12630 f4e845598ec2b7327523cc48b2407b09 150 PRINTS PR00598 Bacterial regulatory protein MarR family signature 68 83 1.3E-9 T 01-11-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 CDA09_12630 f4e845598ec2b7327523cc48b2407b09 150 PRINTS PR00598 Bacterial regulatory protein MarR family signature 51 67 1.3E-9 T 01-11-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 CDA09_12630 f4e845598ec2b7327523cc48b2407b09 150 PRINTS PR00598 Bacterial regulatory protein MarR family signature 87 103 1.3E-9 T 01-11-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 CDA09_12630 f4e845598ec2b7327523cc48b2407b09 150 PRINTS PR00598 Bacterial regulatory protein MarR family signature 117 137 1.3E-9 T 01-11-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 CDA09_12630 f4e845598ec2b7327523cc48b2407b09 150 Pfam PF01047 MarR family 37 91 1.8E-12 T 01-11-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 CDA09_05895 cb33146e0a937294718671139da8bf26 550 Pfam PF13193 AMP-binding enzyme C-terminal domain 451 526 9.4E-18 T 01-11-2018 IPR025110 AMP-binding enzyme, C-terminal domain CDA09_05895 cb33146e0a937294718671139da8bf26 550 Pfam PF00501 AMP-binding enzyme 30 442 1.6E-91 T 01-11-2018 IPR000873 AMP-dependent synthetase/ligase GO:0003824 CDA09_05895 cb33146e0a937294718671139da8bf26 550 Gene3D G3DSA:3.30.300.310 438 540 1.3E-33 T 01-11-2018 CDA09_05895 cb33146e0a937294718671139da8bf26 550 ProSitePatterns PS00455 Putative AMP-binding domain signature. 185 196 - T 01-11-2018 IPR020845 AMP-binding, conserved site CDA09_05895 cb33146e0a937294718671139da8bf26 550 SUPERFAMILY SSF56801 15 538 1.7E-138 T 01-11-2018 CDA09_05895 cb33146e0a937294718671139da8bf26 550 Gene3D G3DSA:3.40.50.12780 2 437 3.3E-123 T 01-11-2018 CDA09_06530 c8236c2b3509fcfb8a7379a9c094a5e6 303 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 6 63 2.8E-13 T 01-11-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 CDA09_06530 c8236c2b3509fcfb8a7379a9c094a5e6 303 SUPERFAMILY SSF53850 90 295 1.86E-46 T 01-11-2018 CDA09_06530 c8236c2b3509fcfb8a7379a9c094a5e6 303 SUPERFAMILY SSF46785 5 86 3.56E-18 T 01-11-2018 IPR036390 Winged helix DNA-binding domain superfamily CDA09_06530 c8236c2b3509fcfb8a7379a9c094a5e6 303 Gene3D G3DSA:3.40.190.10 91 289 2.0E-63 T 01-11-2018 CDA09_06530 c8236c2b3509fcfb8a7379a9c094a5e6 303 Pfam PF03466 LysR substrate binding domain 88 290 3.7E-45 T 01-11-2018 IPR005119 LysR, substrate-binding CDA09_06530 c8236c2b3509fcfb8a7379a9c094a5e6 303 Gene3D G3DSA:1.10.10.10 3 89 1.5E-21 T 01-11-2018 IPR036388 Winged helix-like DNA-binding domain superfamily CDA09_06530 c8236c2b3509fcfb8a7379a9c094a5e6 303 Gene3D G3DSA:3.40.190.10 163 264 2.0E-63 T 01-11-2018 CDA09_00935 f2d32adb667956bfe9f87a9b50d10867 244 SMART SM00382 38 214 9.9E-13 T 01-11-2018 IPR003593 AAA+ ATPase domain CDA09_00935 f2d32adb667956bfe9f87a9b50d10867 244 Pfam PF00005 ABC transporter 31 166 1.7E-19 T 01-11-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 CDA09_00935 f2d32adb667956bfe9f87a9b50d10867 244 SUPERFAMILY SSF52540 9 229 8.49E-50 T 01-11-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CDA09_00935 f2d32adb667956bfe9f87a9b50d10867 244 Gene3D G3DSA:3.40.50.300 11 239 2.4E-47 T 01-11-2018 CDA09_06820 8eb33621cdd3ff3acdbed81796f7d249 232 Gene3D G3DSA:3.30.2320.30 118 223 4.7E-5 T 01-11-2018 IPR038495 V-type ATPase subunit E, C-terminal domain superfamily Reactome: R-HSA-1222556|Reactome: R-HSA-77387|Reactome: R-HSA-917977|Reactome: R-HSA-983712 CDA09_06820 8eb33621cdd3ff3acdbed81796f7d249 232 Pfam PF02108 Flagellar assembly protein FliH 92 217 2.0E-32 T 01-11-2018 IPR018035 Flagellar assembly protein FliH/Type III secretion system HrpE CDA09_06820 8eb33621cdd3ff3acdbed81796f7d249 232 SUPERFAMILY SSF160527 130 220 1.11E-6 T 01-11-2018 CDA09_04650 b9fd9073d6ef942ef40fa5277215fd6f 398 Gene3D G3DSA:3.40.50.2000 194 365 2.9E-40 T 01-11-2018 CDA09_04650 b9fd9073d6ef942ef40fa5277215fd6f 398 SUPERFAMILY SSF53756 2 381 2.66E-78 T 01-11-2018 CDA09_04650 b9fd9073d6ef942ef40fa5277215fd6f 398 Pfam PF00534 Glycosyl transferases group 1 197 358 3.9E-29 T 01-11-2018 IPR001296 Glycosyl transferase, family 1 CDA09_04650 b9fd9073d6ef942ef40fa5277215fd6f 398 Gene3D G3DSA:3.40.50.2000 1 193 2.4E-34 T 01-11-2018 CDA09_04650 b9fd9073d6ef942ef40fa5277215fd6f 398 Pfam PF13439 Glycosyltransferase Family 4 14 185 1.7E-29 T 01-11-2018 IPR028098 Glycosyltransferase subfamily 4-like, N-terminal domain Reactome: R-HSA-446193|Reactome: R-HSA-4549349 CDA09_13850 7887e7032d6e1c100ee6439476209712 256 SUPERFAMILY SSF51735 5 255 3.54E-65 T 01-11-2018 IPR036291 NAD(P)-binding domain superfamily CDA09_13850 7887e7032d6e1c100ee6439476209712 256 SMART SM00822 This enzymatic domain is part of bacterial polyketide synthases and catalyses the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain. It uses NADPH to reduce the keto group to a hydroxy group. 6 190 1.6E-4 T 01-11-2018 CDA09_13850 7887e7032d6e1c100ee6439476209712 256 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 82 93 6.7E-10 T 01-11-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CDA09_13850 7887e7032d6e1c100ee6439476209712 256 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 134 142 6.7E-10 T 01-11-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CDA09_13850 7887e7032d6e1c100ee6439476209712 256 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 154 173 6.7E-10 T 01-11-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CDA09_13850 7887e7032d6e1c100ee6439476209712 256 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 12 253 5.2E-51 T 01-11-2018 CDA09_13850 7887e7032d6e1c100ee6439476209712 256 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 141 169 - T 01-11-2018 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 CDA09_13850 7887e7032d6e1c100ee6439476209712 256 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 175 192 8.6E-22 T 01-11-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CDA09_13850 7887e7032d6e1c100ee6439476209712 256 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 154 173 8.6E-22 T 01-11-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CDA09_13850 7887e7032d6e1c100ee6439476209712 256 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 7 24 8.6E-22 T 01-11-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CDA09_13850 7887e7032d6e1c100ee6439476209712 256 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 82 93 8.6E-22 T 01-11-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CDA09_13850 7887e7032d6e1c100ee6439476209712 256 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 128 144 8.6E-22 T 01-11-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CDA09_13850 7887e7032d6e1c100ee6439476209712 256 Gene3D G3DSA:3.40.50.720 2 255 9.0E-71 T 01-11-2018 CDA09_01585 588c60b4bc8cd50ece1bf9d7a07f744b 154 Gene3D G3DSA:1.10.10.10 1 55 3.6E-28 T 01-11-2018 IPR036388 Winged helix-like DNA-binding domain superfamily CDA09_01585 588c60b4bc8cd50ece1bf9d7a07f744b 154 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 31 50 2.4E-20 T 01-11-2018 IPR000485 AsnC-type HTH domain GO:0043565 CDA09_01585 588c60b4bc8cd50ece1bf9d7a07f744b 154 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 4 20 2.4E-20 T 01-11-2018 IPR000485 AsnC-type HTH domain GO:0043565 CDA09_01585 588c60b4bc8cd50ece1bf9d7a07f744b 154 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 20 31 2.4E-20 T 01-11-2018 IPR000485 AsnC-type HTH domain GO:0043565 CDA09_01585 588c60b4bc8cd50ece1bf9d7a07f744b 154 Gene3D G3DSA:3.30.70.920 56 149 8.8E-22 T 01-11-2018 CDA09_01585 588c60b4bc8cd50ece1bf9d7a07f744b 154 Pfam PF01037 Lrp/AsnC ligand binding domain 70 144 6.8E-18 T 01-11-2018 IPR019887 Transcription regulator AsnC/Lrp, ligand binding domain CDA09_01585 588c60b4bc8cd50ece1bf9d7a07f744b 154 SUPERFAMILY SSF54909 66 152 2.01E-18 T 01-11-2018 IPR011008 Dimeric alpha-beta barrel CDA09_01585 588c60b4bc8cd50ece1bf9d7a07f744b 154 SUPERFAMILY SSF46785 3 63 1.03E-20 T 01-11-2018 IPR036390 Winged helix DNA-binding domain superfamily CDA09_01585 588c60b4bc8cd50ece1bf9d7a07f744b 154 SMART SM00344 4 113 6.7E-49 T 01-11-2018 IPR019888 Transcription regulator AsnC-type GO:0003700|GO:0005622|GO:0006355|GO:0043565 CDA09_01585 588c60b4bc8cd50ece1bf9d7a07f744b 154 Pfam PF13412 Winged helix-turn-helix DNA-binding 4 51 8.4E-21 T 01-11-2018 CDA09_01585 588c60b4bc8cd50ece1bf9d7a07f744b 154 ProSitePatterns PS00519 AsnC-type HTH domain signature. 22 48 - T 01-11-2018 IPR019885 Transcription regulator HTH, AsnC-type, conserved site CDA09_13280 e7090ab1b96b8107d81e53d94a80dc77 233 Pfam PF03588 Leucyl/phenylalanyl-tRNA protein transferase 33 203 1.6E-74 T 01-11-2018 IPR004616 Leucyl/phenylalanyl-tRNA-protein transferase GO:0008914|GO:0030163 MetaCyc: PWY-7801 CDA09_13280 e7090ab1b96b8107d81e53d94a80dc77 233 Gene3D G3DSA:3.40.630.70 60 228 1.9E-64 T 01-11-2018 CDA09_13280 e7090ab1b96b8107d81e53d94a80dc77 233 Gene3D G3DSA:2.30.210.20 5 59 5.5E-23 T 01-11-2018 CDA09_13280 e7090ab1b96b8107d81e53d94a80dc77 233 SUPERFAMILY SSF55729 2 217 9.75E-90 T 01-11-2018 IPR016181 Acyl-CoA N-acyltransferase CDA09_13280 e7090ab1b96b8107d81e53d94a80dc77 233 Hamap MF_00688 Leucyl/phenylalanyl-tRNA--protein transferase [aat]. 1 233 97.556 T 01-11-2018 IPR004616 Leucyl/phenylalanyl-tRNA-protein transferase GO:0008914|GO:0030163 MetaCyc: PWY-7801 CDA09_13280 e7090ab1b96b8107d81e53d94a80dc77 233 TIGRFAM TIGR00667 aat: leucyl/phenylalanyl-tRNA--protein transferase 37 211 1.2E-63 T 01-11-2018 IPR004616 Leucyl/phenylalanyl-tRNA-protein transferase GO:0008914|GO:0030163 MetaCyc: PWY-7801 CDA09_10180 5c36ed5dd59f2944cdf7a05340203bfa 280 Gene3D G3DSA:1.10.3720.10 59 277 3.0E-23 T 01-11-2018 IPR035906 MetI-like superfamily CDA09_10180 5c36ed5dd59f2944cdf7a05340203bfa 280 TIGRFAM TIGR00974 3a0107s02c: phosphate ABC transporter, permease protein PstA 12 276 7.6E-80 T 01-11-2018 IPR005672 Phosphate transport system permease protein PstA GO:0005315|GO:0005887|GO:0035435 CDA09_10180 5c36ed5dd59f2944cdf7a05340203bfa 280 SUPERFAMILY SSF161098 26 267 6.67E-29 T 01-11-2018 IPR035906 MetI-like superfamily CDA09_10180 5c36ed5dd59f2944cdf7a05340203bfa 280 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 85 274 3.1E-21 T 01-11-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 CDA09_13485 8c1533042f7656411a460382003e72a9 113 Pfam PF11985 Protein of unknown function (DUF3486) 1 63 7.9E-12 T 01-11-2018 IPR021874 Bacteriophage Mu, Gp27 CDA09_20235 c1ac95e2bdf498ece561c22b7f354833 341 Pfam PF02470 MlaD protein 82 153 6.4E-9 T 01-11-2018 IPR003399 Mce/MlaD CDA09_03890 28e3d87e787cdac3acf302c74556f60a 67 Hamap MF_00649 DNA gyrase inhibitor YacG [yacG]. 3 60 18.996 T 01-11-2018 IPR005584 DNA gyrase inhibitor YacG GO:0008270 CDA09_03890 28e3d87e787cdac3acf302c74556f60a 67 Gene3D G3DSA:3.30.50.10 1 63 1.2E-24 T 01-11-2018 IPR013088 Zinc finger, NHR/GATA-type GO:0006355|GO:0008270 Reactome: R-HSA-383280 CDA09_03890 28e3d87e787cdac3acf302c74556f60a 67 Pfam PF03884 DNA gyrase inhibitor YacG 7 54 2.4E-25 T 01-11-2018 IPR005584 DNA gyrase inhibitor YacG GO:0008270 CDA09_03890 28e3d87e787cdac3acf302c74556f60a 67 SUPERFAMILY SSF57716 2 59 6.27E-22 T 01-11-2018 CDA09_09355 07e717711a8b708db0a53ee5dede9356 279 Pfam PF09407 AbiEi antitoxin C-terminal domain 84 224 8.6E-25 T 01-11-2018 IPR018547 AbiEi antitoxin C-terminal domain CDA09_13815 d6e37339b1a2d2ab81a9593b37aa6437 212 Pfam PF01227 GTP cyclohydrolase I 24 201 4.9E-75 T 01-11-2018 IPR020602 GTP cyclohydrolase I domain KEGG: 00790+3.5.4.16|MetaCyc: PWY-5663|MetaCyc: PWY-5664|MetaCyc: PWY-6147|MetaCyc: PWY-6703|MetaCyc: PWY-6983|MetaCyc: PWY-7442|MetaCyc: PWY-7852|Reactome: R-HSA-1474151 CDA09_13815 d6e37339b1a2d2ab81a9593b37aa6437 212 Gene3D G3DSA:1.10.286.10 8 67 9.1E-19 T 01-11-2018 CDA09_13815 d6e37339b1a2d2ab81a9593b37aa6437 212 Gene3D G3DSA:3.30.1130.10 71 203 5.4E-54 T 01-11-2018 CDA09_13815 d6e37339b1a2d2ab81a9593b37aa6437 212 Hamap MF_00223 GTP cyclohydrolase 1 [folE]. 19 202 39.341 T 01-11-2018 IPR001474 GTP cyclohydrolase I GO:0003934|GO:0005737|GO:0046654 KEGG: 00790+3.5.4.16|MetaCyc: PWY-5663|MetaCyc: PWY-5664|MetaCyc: PWY-6147|MetaCyc: PWY-6703|MetaCyc: PWY-6983|MetaCyc: PWY-7442|MetaCyc: PWY-7852|Reactome: R-HSA-1474151 CDA09_13815 d6e37339b1a2d2ab81a9593b37aa6437 212 ProSitePatterns PS00859 GTP cyclohydrolase I signature 1. 81 97 - T 01-11-2018 IPR018234 GTP cyclohydrolase I, conserved site GO:0003934|GO:0005737|GO:0046654 KEGG: 00790+3.5.4.16|MetaCyc: PWY-5663|MetaCyc: PWY-5664|MetaCyc: PWY-6147|MetaCyc: PWY-6703|MetaCyc: PWY-6983|MetaCyc: PWY-7442|MetaCyc: PWY-7852|Reactome: R-HSA-1474151 CDA09_13815 d6e37339b1a2d2ab81a9593b37aa6437 212 ProSitePatterns PS00860 GTP cyclohydrolase I signature 2. 129 139 - T 01-11-2018 IPR018234 GTP cyclohydrolase I, conserved site GO:0003934|GO:0005737|GO:0046654 KEGG: 00790+3.5.4.16|MetaCyc: PWY-5663|MetaCyc: PWY-5664|MetaCyc: PWY-6147|MetaCyc: PWY-6703|MetaCyc: PWY-6983|MetaCyc: PWY-7442|MetaCyc: PWY-7852|Reactome: R-HSA-1474151 CDA09_13815 d6e37339b1a2d2ab81a9593b37aa6437 212 SUPERFAMILY SSF55620 16 202 1.48E-76 T 01-11-2018 CDA09_13815 d6e37339b1a2d2ab81a9593b37aa6437 212 TIGRFAM TIGR00063 folE: GTP cyclohydrolase I 24 201 1.5E-66 T 01-11-2018 IPR001474 GTP cyclohydrolase I GO:0003934|GO:0005737|GO:0046654 KEGG: 00790+3.5.4.16|MetaCyc: PWY-5663|MetaCyc: PWY-5664|MetaCyc: PWY-6147|MetaCyc: PWY-6703|MetaCyc: PWY-6983|MetaCyc: PWY-7442|MetaCyc: PWY-7852|Reactome: R-HSA-1474151 CDA09_18520 3966eb195d7674f5826e95d4bc396771 192 Pfam PF01169 Uncharacterized protein family UPF0016 11 84 4.2E-19 T 01-11-2018 IPR001727 Gdt1 family CDA09_18520 3966eb195d7674f5826e95d4bc396771 192 Pfam PF01169 Uncharacterized protein family UPF0016 108 182 2.7E-21 T 01-11-2018 IPR001727 Gdt1 family CDA09_10655 560ec1305a2bb6ef0071a26a63a633c4 264 SUPERFAMILY SSF54001 38 235 2.45E-22 T 01-11-2018 IPR038765 Papain-like cysteine peptidase superfamily CDA09_10655 560ec1305a2bb6ef0071a26a63a633c4 264 Gene3D G3DSA:3.90.1720.10 28 190 1.4E-10 T 01-11-2018 CDA09_10655 560ec1305a2bb6ef0071a26a63a633c4 264 Pfam PF05708 Permuted papain-like amidase enzyme, YaeF/YiiX, C92 family 38 138 2.2E-10 T 01-11-2018 IPR024453 Permuted papain-like amidase enzyme, YaeF/YiiX, C92 family CDA09_21855 88f9aa1e0699b1069c2ca884005658f2 237 Pfam PF00005 ABC transporter 21 165 6.5E-33 T 01-11-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 CDA09_21855 88f9aa1e0699b1069c2ca884005658f2 237 SMART SM00382 30 214 1.3E-11 T 01-11-2018 IPR003593 AAA+ ATPase domain CDA09_21855 88f9aa1e0699b1069c2ca884005658f2 237 Gene3D G3DSA:3.40.50.300 1 237 1.3E-58 T 01-11-2018 CDA09_21855 88f9aa1e0699b1069c2ca884005658f2 237 SUPERFAMILY SSF52540 5 232 2.0E-58 T 01-11-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CDA09_21855 88f9aa1e0699b1069c2ca884005658f2 237 ProSitePatterns PS00211 ABC transporters family signature. 138 152 - T 01-11-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 CDA09_01770 6dfac4a1af1c4bfd1a8a821aeaabeb00 497 SUPERFAMILY SSF53720 2 481 2.75E-149 T 01-11-2018 IPR016161 Aldehyde/histidinol dehydrogenase GO:0016491|GO:0055114 CDA09_01770 6dfac4a1af1c4bfd1a8a821aeaabeb00 497 Gene3D G3DSA:3.40.605.10 22 458 8.6E-159 T 01-11-2018 IPR016162 Aldehyde dehydrogenase, N-terminal GO:0016491|GO:0055114 CDA09_01770 6dfac4a1af1c4bfd1a8a821aeaabeb00 497 TIGRFAM TIGR01722 MMSDH: methylmalonate-semialdehyde dehydrogenase (acylating) 6 481 1.4E-203 T 01-11-2018 IPR010061 Methylmalonate-semialdehyde dehydrogenase GO:0004491|GO:0055114 KEGG: 00280+1.2.1.27|KEGG: 00640+1.2.1.27|MetaCyc: PWY-5642|Reactome: R-HSA-70895 CDA09_01770 6dfac4a1af1c4bfd1a8a821aeaabeb00 497 Pfam PF00171 Aldehyde dehydrogenase family 16 476 1.5E-140 T 01-11-2018 IPR015590 Aldehyde dehydrogenase domain GO:0016491|GO:0055114 CDA09_01770 6dfac4a1af1c4bfd1a8a821aeaabeb00 497 Gene3D G3DSA:3.40.309.10 248 450 8.6E-159 T 01-11-2018 IPR016163 Aldehyde dehydrogenase, C-terminal GO:0016491|GO:0016620|GO:0055114 CDA09_01770 6dfac4a1af1c4bfd1a8a821aeaabeb00 497 ProSitePatterns PS00070 Aldehyde dehydrogenases cysteine active site. 273 284 - T 01-11-2018 IPR016160 Aldehyde dehydrogenase, cysteine active site GO:0016491|GO:0055114 CDA09_02645 93950eac213de4fb6a26068815d13195 203 SUPERFAMILY SSF52540 14 203 7.5E-70 T 01-11-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CDA09_02645 93950eac213de4fb6a26068815d13195 203 Pfam PF02572 ATP:corrinoid adenosyltransferase BtuR/CobO/CobP 34 203 1.1E-57 T 01-11-2018 IPR003724 ATP:cob(I)alamin adenosyltransferase CobA/CobO/ButR GO:0005524|GO:0008817|GO:0009236 KEGG: 00860+2.5.1.17 CDA09_02645 93950eac213de4fb6a26068815d13195 203 PIRSF PIRSF015617 7 203 9.1E-67 T 01-11-2018 IPR003724 ATP:cob(I)alamin adenosyltransferase CobA/CobO/ButR GO:0005524|GO:0008817|GO:0009236 KEGG: 00860+2.5.1.17 CDA09_02645 93950eac213de4fb6a26068815d13195 203 Gene3D G3DSA:3.40.50.300 12 203 2.8E-64 T 01-11-2018 CDA09_02645 93950eac213de4fb6a26068815d13195 203 TIGRFAM TIGR00708 cobA: cob(I)yrinic acid a,c-diamide adenosyltransferase 30 203 8.1E-66 T 01-11-2018 IPR003724 ATP:cob(I)alamin adenosyltransferase CobA/CobO/ButR GO:0005524|GO:0008817|GO:0009236 KEGG: 00860+2.5.1.17 CDA09_02645 93950eac213de4fb6a26068815d13195 203 Pfam PF12557 Cob(I)alamin adenosyltransferase N terminal 3 27 1.5E-7 T 01-11-2018 IPR025826 Cob(I)alamin adenosyltransferase N-terminal domain KEGG: 00860+2.5.1.17 CDA09_09270 c3d3b1e321a5da4fc309606705f269d5 257 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 183 200 3.5E-36 T 01-11-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CDA09_09270 c3d3b1e321a5da4fc309606705f269d5 257 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 83 94 3.5E-36 T 01-11-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CDA09_09270 c3d3b1e321a5da4fc309606705f269d5 257 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 136 152 3.5E-36 T 01-11-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CDA09_09270 c3d3b1e321a5da4fc309606705f269d5 257 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 11 28 3.5E-36 T 01-11-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CDA09_09270 c3d3b1e321a5da4fc309606705f269d5 257 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 217 237 3.5E-36 T 01-11-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CDA09_09270 c3d3b1e321a5da4fc309606705f269d5 257 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 162 181 3.5E-36 T 01-11-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CDA09_09270 c3d3b1e321a5da4fc309606705f269d5 257 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 16 254 1.0E-59 T 01-11-2018 CDA09_09270 c3d3b1e321a5da4fc309606705f269d5 257 SMART SM00822 This enzymatic domain is part of bacterial polyketide synthases and catalyses the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain. It uses NADPH to reduce the keto group to a hydroxy group. 10 198 0.0016 T 01-11-2018 CDA09_09270 c3d3b1e321a5da4fc309606705f269d5 257 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 162 181 4.1E-10 T 01-11-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CDA09_09270 c3d3b1e321a5da4fc309606705f269d5 257 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 83 94 4.1E-10 T 01-11-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CDA09_09270 c3d3b1e321a5da4fc309606705f269d5 257 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 142 150 4.1E-10 T 01-11-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CDA09_09270 c3d3b1e321a5da4fc309606705f269d5 257 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 149 177 - T 01-11-2018 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 CDA09_09270 c3d3b1e321a5da4fc309606705f269d5 257 Gene3D G3DSA:3.40.50.720 1 256 1.5E-79 T 01-11-2018 CDA09_09270 c3d3b1e321a5da4fc309606705f269d5 257 SUPERFAMILY SSF51735 8 255 1.12E-76 T 01-11-2018 IPR036291 NAD(P)-binding domain superfamily CDA09_17065 b941625ef3764428923ca9dad75075de 510 Pfam PF13193 AMP-binding enzyme C-terminal domain 416 493 1.8E-9 T 01-11-2018 IPR025110 AMP-binding enzyme, C-terminal domain CDA09_17065 b941625ef3764428923ca9dad75075de 510 Pfam PF00501 AMP-binding enzyme 29 407 6.1E-54 T 01-11-2018 IPR000873 AMP-dependent synthetase/ligase GO:0003824 CDA09_17065 b941625ef3764428923ca9dad75075de 510 Gene3D G3DSA:3.40.50.12780 3 402 3.2E-70 T 01-11-2018 CDA09_17065 b941625ef3764428923ca9dad75075de 510 Gene3D G3DSA:3.30.300.310 403 506 1.1E-24 T 01-11-2018 CDA09_17065 b941625ef3764428923ca9dad75075de 510 ProSitePatterns PS00455 Putative AMP-binding domain signature. 159 170 - T 01-11-2018 IPR020845 AMP-binding, conserved site CDA09_17065 b941625ef3764428923ca9dad75075de 510 SUPERFAMILY SSF56801 17 505 3.01E-101 T 01-11-2018 CDA09_07395 24be3cfba973d079a457841850adfede 218 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 176 188 2.2E-12 T 01-11-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 CDA09_07395 24be3cfba973d079a457841850adfede 218 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 146 160 2.2E-12 T 01-11-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 CDA09_07395 24be3cfba973d079a457841850adfede 218 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 160 176 2.2E-12 T 01-11-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 CDA09_07395 24be3cfba973d079a457841850adfede 218 ProSitePatterns PS00622 LuxR-type HTH domain signature. 160 187 - T 01-11-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 CDA09_07395 24be3cfba973d079a457841850adfede 218 Pfam PF00196 Bacterial regulatory proteins, luxR family 145 199 1.2E-19 T 01-11-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 CDA09_07395 24be3cfba973d079a457841850adfede 218 SMART SM00448 8 119 1.1E-17 T 01-11-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 CDA09_07395 24be3cfba973d079a457841850adfede 218 SMART SM00421 143 200 1.2E-21 T 01-11-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 CDA09_07395 24be3cfba973d079a457841850adfede 218 Pfam PF00072 Response regulator receiver domain 10 120 3.0E-21 T 01-11-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 CDA09_07395 24be3cfba973d079a457841850adfede 218 Gene3D G3DSA:1.10.10.10 138 201 3.1E-20 T 01-11-2018 IPR036388 Winged helix-like DNA-binding domain superfamily CDA09_07395 24be3cfba973d079a457841850adfede 218 Gene3D G3DSA:3.40.50.2300 3 137 8.1E-41 T 01-11-2018 CDA09_07395 24be3cfba973d079a457841850adfede 218 SUPERFAMILY SSF52172 8 167 2.78E-28 T 01-11-2018 IPR011006 CheY-like superfamily CDA09_16245 5209324ba58ac9213643b7e59de24f5f 252 Pfam PF00121 Triosephosphate isomerase 4 242 2.8E-79 T 01-11-2018 IPR000652 Triosephosphate isomerase GO:0004807 KEGG: 00010+5.3.1.1|KEGG: 00051+5.3.1.1|KEGG: 00562+5.3.1.1|KEGG: 00710+5.3.1.1|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6142|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 CDA09_16245 5209324ba58ac9213643b7e59de24f5f 252 Hamap MF_00147_B Triosephosphate isomerase [tpiA]. 2 244 52.74 T 01-11-2018 IPR022896 Triosephosphate isomerase, bacterial/eukaryotic GO:0004807|GO:0006096 KEGG: 00010+5.3.1.1|KEGG: 00051+5.3.1.1|KEGG: 00562+5.3.1.1|KEGG: 00710+5.3.1.1|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6142|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 CDA09_16245 5209324ba58ac9213643b7e59de24f5f 252 ProSitePatterns PS00171 Triosephosphate isomerase active site. 162 172 - T 01-11-2018 IPR020861 Triosephosphate isomerase, active site GO:0004807 KEGG: 00010+5.3.1.1|KEGG: 00051+5.3.1.1|KEGG: 00562+5.3.1.1|KEGG: 00710+5.3.1.1|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6142|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 CDA09_16245 5209324ba58ac9213643b7e59de24f5f 252 Gene3D G3DSA:3.20.20.70 1 251 2.0E-88 T 01-11-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 CDA09_16245 5209324ba58ac9213643b7e59de24f5f 252 SUPERFAMILY SSF51351 1 246 2.36E-83 T 01-11-2018 IPR035990 Triosephosphate isomerase superfamily GO:0004807 KEGG: 00010+5.3.1.1|KEGG: 00051+5.3.1.1|KEGG: 00562+5.3.1.1|KEGG: 00710+5.3.1.1|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6142|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 CDA09_16245 5209324ba58ac9213643b7e59de24f5f 252 TIGRFAM TIGR00419 tim: triose-phosphate isomerase 5 235 3.3E-57 T 01-11-2018 IPR000652 Triosephosphate isomerase GO:0004807 KEGG: 00010+5.3.1.1|KEGG: 00051+5.3.1.1|KEGG: 00562+5.3.1.1|KEGG: 00710+5.3.1.1|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6142|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 CDA09_19355 706e93a6c4bdfd12f0b2b628caaa35f7 168 PIRSF PIRSF019217 1 168 8.3E-93 T 01-11-2018 IPR016750 Acetophenone carboxylase beta subunit/Acetone carboxylase gamma subunit CDA09_19355 706e93a6c4bdfd12f0b2b628caaa35f7 168 Pfam PF08882 Acetone carboxylase gamma subunit 46 159 8.2E-57 T 01-11-2018 IPR016750 Acetophenone carboxylase beta subunit/Acetone carboxylase gamma subunit CDA09_00885 f46bb7f35daa2aacbdecfa9180fc6098 625 SMART SM00382 410 596 2.2E-15 T 01-11-2018 IPR003593 AAA+ ATPase domain CDA09_00885 f46bb7f35daa2aacbdecfa9180fc6098 625 Pfam PF00005 ABC transporter 405 550 1.2E-21 T 01-11-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 CDA09_00885 f46bb7f35daa2aacbdecfa9180fc6098 625 Gene3D G3DSA:3.40.50.300 380 623 5.2E-56 T 01-11-2018 CDA09_00885 f46bb7f35daa2aacbdecfa9180fc6098 625 Gene3D G3DSA:1.20.1560.10 23 365 2.7E-29 T 01-11-2018 IPR036640 ABC transporter type 1, transmembrane domain superfamily GO:0005524|GO:0016021 CDA09_00885 f46bb7f35daa2aacbdecfa9180fc6098 625 SUPERFAMILY SSF90123 41 355 2.49E-32 T 01-11-2018 IPR036640 ABC transporter type 1, transmembrane domain superfamily GO:0005524|GO:0016021 CDA09_00885 f46bb7f35daa2aacbdecfa9180fc6098 625 Pfam PF00664 ABC transporter transmembrane region 57 291 2.2E-14 T 01-11-2018 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0016021|GO:0042626|GO:0055085 CDA09_00885 f46bb7f35daa2aacbdecfa9180fc6098 625 SUPERFAMILY SSF52540 384 620 2.11E-49 T 01-11-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CDA09_14055 52efe73fb7369551d8277b289d23e353 949 TIGRFAM TIGR03744 traC_PFL_4706: conjugative transfer ATPase, PFL_4706 family 38 948 0.0 T 01-11-2018 IPR022303 Conjugative transfer ATPase CDA09_14055 52efe73fb7369551d8277b289d23e353 949 Gene3D G3DSA:3.40.50.300 494 606 1.6E-9 T 01-11-2018 CDA09_14055 52efe73fb7369551d8277b289d23e353 949 Gene3D G3DSA:3.40.50.300 726 905 3.4E-13 T 01-11-2018 CDA09_14055 52efe73fb7369551d8277b289d23e353 949 SUPERFAMILY SSF52540 474 872 5.31E-32 T 01-11-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CDA09_14055 52efe73fb7369551d8277b289d23e353 949 Pfam PF11130 F pilus assembly Type-IV secretion system for plasmid transfer 48 324 5.1E-64 T 01-11-2018 IPR025955 Type-IV secretion system protein TraC/Conjugative transfer ATPase CDA09_00615 b7c1cc6ffc4ab5651e12c098f00ee0d1 207 TIGRFAM TIGR00214 lipB: lipoyl(octanoyl) transferase 24 198 1.1E-60 T 01-11-2018 IPR000544 Octanoyltransferase GO:0009249|GO:0033819 KEGG: 00785+2.3.1.181|MetaCyc: PWY-6987|MetaCyc: PWY-7382|Reactome: R-HSA-389661 CDA09_00615 b7c1cc6ffc4ab5651e12c098f00ee0d1 207 SUPERFAMILY SSF55681 2 198 1.08E-66 T 01-11-2018 CDA09_00615 b7c1cc6ffc4ab5651e12c098f00ee0d1 207 Pfam PF03099 Biotin/lipoate A/B protein ligase family 55 154 2.2E-7 T 01-11-2018 IPR004143 Biotinyl protein ligase (BPL) and lipoyl protein ligase (LPL), catalytic domain GO:0006464 KEGG: 00785+2.3.1.181|MetaCyc: PWY-6987|MetaCyc: PWY-7382 CDA09_00615 b7c1cc6ffc4ab5651e12c098f00ee0d1 207 ProDom PD006086 LIGASE LIPOATE-PROTEIN B TRANSFERASE ACYLTRANSFERASE LIPOYLTRANSFERASE LIPOYL-ACYL-CARRIER 2.3.1.- PROTEIN-PROTEIN- N-LIPOYLTRANSFERASE 70 123 1.0E-18 T 01-11-2018 CDA09_00615 b7c1cc6ffc4ab5651e12c098f00ee0d1 207 Hamap MF_00013 Octanoyltransferase [lipB]. 1 201 37.765 T 01-11-2018 IPR000544 Octanoyltransferase GO:0009249|GO:0033819 KEGG: 00785+2.3.1.181|MetaCyc: PWY-6987|MetaCyc: PWY-7382|Reactome: R-HSA-389661 CDA09_00615 b7c1cc6ffc4ab5651e12c098f00ee0d1 207 Gene3D G3DSA:3.30.930.10 1 197 1.9E-64 T 01-11-2018 CDA09_00615 b7c1cc6ffc4ab5651e12c098f00ee0d1 207 PIRSF PIRSF016262 2 205 1.2E-58 T 01-11-2018 IPR000544 Octanoyltransferase GO:0009249|GO:0033819 KEGG: 00785+2.3.1.181|MetaCyc: PWY-6987|MetaCyc: PWY-7382|Reactome: R-HSA-389661 CDA09_00615 b7c1cc6ffc4ab5651e12c098f00ee0d1 207 ProSitePatterns PS01313 Lipoate-protein ligase B signature. 66 81 - T 01-11-2018 IPR020605 Octanoyltransferase, conserved site GO:0009249|GO:0033819 KEGG: 00785+2.3.1.181|MetaCyc: PWY-6987|MetaCyc: PWY-7382 CDA09_01935 45595741d9a42e0f1947a8221af4171f 587 Pfam PF00115 Cytochrome C and Quinol oxidase polypeptide I 26 489 2.2E-135 T 01-11-2018 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 CDA09_01935 45595741d9a42e0f1947a8221af4171f 587 Gene3D G3DSA:1.20.210.10 4 549 1.1E-192 T 01-11-2018 IPR036927 Cytochrome c oxidase-like, subunit I superfamily GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 CDA09_01935 45595741d9a42e0f1947a8221af4171f 587 PRINTS PR01165 Cytochrome c oxidase subunit I signature 64 87 4.6E-72 T 01-11-2018 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 CDA09_01935 45595741d9a42e0f1947a8221af4171f 587 PRINTS PR01165 Cytochrome c oxidase subunit I signature 329 350 4.6E-72 T 01-11-2018 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 CDA09_01935 45595741d9a42e0f1947a8221af4171f 587 PRINTS PR01165 Cytochrome c oxidase subunit I signature 305 320 4.6E-72 T 01-11-2018 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 CDA09_01935 45595741d9a42e0f1947a8221af4171f 587 PRINTS PR01165 Cytochrome c oxidase subunit I signature 259 280 4.6E-72 T 01-11-2018 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 CDA09_01935 45595741d9a42e0f1947a8221af4171f 587 PRINTS PR01165 Cytochrome c oxidase subunit I signature 392 411 4.6E-72 T 01-11-2018 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 CDA09_01935 45595741d9a42e0f1947a8221af4171f 587 PRINTS PR01165 Cytochrome c oxidase subunit I signature 16 41 4.6E-72 T 01-11-2018 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 CDA09_01935 45595741d9a42e0f1947a8221af4171f 587 PRINTS PR01165 Cytochrome c oxidase subunit I signature 92 116 4.6E-72 T 01-11-2018 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 CDA09_01935 45595741d9a42e0f1947a8221af4171f 587 PRINTS PR01165 Cytochrome c oxidase subunit I signature 442 463 4.6E-72 T 01-11-2018 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 CDA09_01935 45595741d9a42e0f1947a8221af4171f 587 PRINTS PR01165 Cytochrome c oxidase subunit I signature 364 382 4.6E-72 T 01-11-2018 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 CDA09_01935 45595741d9a42e0f1947a8221af4171f 587 TIGRFAM TIGR02891 CtaD_CoxA: cytochrome c oxidase, subunit I 17 539 5.0E-208 T 01-11-2018 IPR014241 Cytochrome c oxidase, subunit I bacterial type GO:0004129|GO:0005886|GO:0015990|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279 CDA09_01935 45595741d9a42e0f1947a8221af4171f 587 ProSitePatterns PS00077 Heme-copper oxidase catalytic subunit, copper B binding region signature. 261 315 - T 01-11-2018 IPR023615 Cytochrome c oxidase, subunit I, copper-binding site GO:0004129|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 CDA09_01935 45595741d9a42e0f1947a8221af4171f 587 SUPERFAMILY SSF81442 13 535 4.06E-154 T 01-11-2018 IPR036927 Cytochrome c oxidase-like, subunit I superfamily GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 CDA09_12650 8d1198c7d639c9384196e13f0239130b 493 Gene3D G3DSA:3.40.630.10 372 490 5.1E-24 T 01-11-2018 CDA09_12650 8d1198c7d639c9384196e13f0239130b 493 TIGRFAM TIGR01893 aa-his-dipept: Xaa-His dipeptidase 12 486 1.4E-152 T 01-11-2018 IPR001160 Peptidase M20C, Xaa-His dipeptidase GO:0006508 CDA09_12650 8d1198c7d639c9384196e13f0239130b 493 Gene3D G3DSA:3.40.630.10 7 245 9.5E-56 T 01-11-2018 CDA09_12650 8d1198c7d639c9384196e13f0239130b 493 Pfam PF01546 Peptidase family M20/M25/M40 78 480 1.8E-16 T 01-11-2018 IPR002933 Peptidase M20 GO:0016787 CDA09_12650 8d1198c7d639c9384196e13f0239130b 493 PRINTS PR00934 X-His dipeptidase (M25) signature 140 157 3.5E-66 T 01-11-2018 IPR001160 Peptidase M20C, Xaa-His dipeptidase GO:0006508 CDA09_12650 8d1198c7d639c9384196e13f0239130b 493 PRINTS PR00934 X-His dipeptidase (M25) signature 106 124 3.5E-66 T 01-11-2018 IPR001160 Peptidase M20C, Xaa-His dipeptidase GO:0006508 CDA09_12650 8d1198c7d639c9384196e13f0239130b 493 PRINTS PR00934 X-His dipeptidase (M25) signature 433 449 3.5E-66 T 01-11-2018 IPR001160 Peptidase M20C, Xaa-His dipeptidase GO:0006508 CDA09_12650 8d1198c7d639c9384196e13f0239130b 493 PRINTS PR00934 X-His dipeptidase (M25) signature 455 477 3.5E-66 T 01-11-2018 IPR001160 Peptidase M20C, Xaa-His dipeptidase GO:0006508 CDA09_12650 8d1198c7d639c9384196e13f0239130b 493 PRINTS PR00934 X-His dipeptidase (M25) signature 368 386 3.5E-66 T 01-11-2018 IPR001160 Peptidase M20C, Xaa-His dipeptidase GO:0006508 CDA09_12650 8d1198c7d639c9384196e13f0239130b 493 PRINTS PR00934 X-His dipeptidase (M25) signature 164 182 3.5E-66 T 01-11-2018 IPR001160 Peptidase M20C, Xaa-His dipeptidase GO:0006508 CDA09_12650 8d1198c7d639c9384196e13f0239130b 493 PRINTS PR00934 X-His dipeptidase (M25) signature 211 228 3.5E-66 T 01-11-2018 IPR001160 Peptidase M20C, Xaa-His dipeptidase GO:0006508 CDA09_12650 8d1198c7d639c9384196e13f0239130b 493 PRINTS PR00934 X-His dipeptidase (M25) signature 85 104 3.5E-66 T 01-11-2018 IPR001160 Peptidase M20C, Xaa-His dipeptidase GO:0006508 CDA09_12650 8d1198c7d639c9384196e13f0239130b 493 PRINTS PR00934 X-His dipeptidase (M25) signature 256 275 3.5E-66 T 01-11-2018 IPR001160 Peptidase M20C, Xaa-His dipeptidase GO:0006508 CDA09_12650 8d1198c7d639c9384196e13f0239130b 493 SUPERFAMILY SSF53187 17 487 1.68E-54 T 01-11-2018 CDA09_12650 8d1198c7d639c9384196e13f0239130b 493 PIRSF PIRSF016599 7 490 1.6E-168 T 01-11-2018 IPR001160 Peptidase M20C, Xaa-His dipeptidase GO:0006508 CDA09_12650 8d1198c7d639c9384196e13f0239130b 493 Pfam PF07687 Peptidase dimerisation domain 217 296 3.0E-5 T 01-11-2018 IPR011650 Peptidase M20, dimerisation domain CDA09_04020 35c33a6aed6650ed09392ca402fa3bbd 202 SUPERFAMILY SSF50715 1 193 1.29E-54 T 01-11-2018 IPR011035 Ribosomal protein L25/Gln-tRNA synthetase, anti-codon-binding domain superfamily GO:0006412 Reactome: R-HSA-2408517|Reactome: R-HSA-379716 CDA09_04020 35c33a6aed6650ed09392ca402fa3bbd 202 Hamap MF_01336 50S ribosomal protein L25 [rplY]. 3 94 20.974 T 01-11-2018 IPR020055 Ribosomal protein L25, short-form GO:0003735|GO:0005840|GO:0006412|GO:0008097 CDA09_04020 35c33a6aed6650ed09392ca402fa3bbd 202 Pfam PF01386 Ribosomal L25p family 6 91 8.6E-24 T 01-11-2018 IPR029751 Ribosomal protein L25 GO:0003735|GO:0005840|GO:0006412|GO:0008097 CDA09_04020 35c33a6aed6650ed09392ca402fa3bbd 202 Hamap MF_01334 50S ribosomal protein L25 [rplY]. 3 185 30.517 T 01-11-2018 IPR001021 Ribosomal protein L25, long-form GO:0003735|GO:0005840|GO:0006412|GO:0008097 CDA09_04020 35c33a6aed6650ed09392ca402fa3bbd 202 Gene3D G3DSA:2.170.120.20 96 195 8.8E-25 T 01-11-2018 IPR037121 Ribosomal protein L25, C-terminal CDA09_04020 35c33a6aed6650ed09392ca402fa3bbd 202 TIGRFAM TIGR00731 bL25_bact_ctc: ribosomal protein bL25, Ctc-form 6 174 6.4E-43 T 01-11-2018 IPR001021 Ribosomal protein L25, long-form GO:0003735|GO:0005840|GO:0006412|GO:0008097 CDA09_04020 35c33a6aed6650ed09392ca402fa3bbd 202 Pfam PF14693 Ribosomal protein TL5, C-terminal domain 99 184 2.2E-27 T 01-11-2018 IPR020057 Ribosomal protein L25, beta domain CDA09_04020 35c33a6aed6650ed09392ca402fa3bbd 202 Gene3D G3DSA:2.40.240.10 1 94 1.7E-29 T 01-11-2018 IPR020056 Ribosomal protein L25/Gln-tRNA synthetase, N-terminal Reactome: R-HSA-2408517|Reactome: R-HSA-379716 CDA09_04020 35c33a6aed6650ed09392ca402fa3bbd 202 ProDom PD012503 RIBOSOMAL L25 50S RRNA-BINDING RNA-BINDING RIBONUCLEOPROTEIN STRESS GENERAL CTC RRNA 5 94 2.0E-36 T 01-11-2018 IPR029751 Ribosomal protein L25 GO:0003735|GO:0005840|GO:0006412|GO:0008097 CDA09_14100 892eb28340cf673a297bd153c325c790 176 TIGRFAM TIGR03765 ICE_PFL_4695: integrating conjugative element protein, PFL_4695 family 69 175 4.1E-25 T 01-11-2018 IPR021300 Integrating conjugative element protein, PFL4695 CDA09_14100 892eb28340cf673a297bd153c325c790 176 Pfam PF11072 Protein of unknown function (DUF2859) 32 172 2.4E-29 T 01-11-2018 IPR021300 Integrating conjugative element protein, PFL4695 CDA09_22710 117e67123d9354def2decf6165e7fa39 387 Pfam PF13458 Periplasmic binding protein 27 365 2.2E-75 T 01-11-2018 IPR028081 Leucine-binding protein domain CDA09_22710 117e67123d9354def2decf6165e7fa39 387 SUPERFAMILY SSF53822 28 379 1.12E-90 T 01-11-2018 IPR028082 Periplasmic binding protein-like I CDA09_22710 117e67123d9354def2decf6165e7fa39 387 Gene3D G3DSA:3.40.50.2300 29 356 5.1E-112 T 01-11-2018 CDA09_22710 117e67123d9354def2decf6165e7fa39 387 Gene3D G3DSA:3.40.50.2300 145 362 5.1E-112 T 01-11-2018 CDA09_07275 e8cf39c3d4938796a95a87b03eb60467 1251 Pfam PF01568 Molydopterin dinucleotide binding domain 1083 1196 5.9E-22 T 01-11-2018 IPR006657 Molybdopterin dinucleotide-binding domain GO:0016491|GO:0043546|GO:0055114 CDA09_07275 e8cf39c3d4938796a95a87b03eb60467 1251 Gene3D G3DSA:3.40.50.12440 44 1242 0.0 T 01-11-2018 CDA09_07275 e8cf39c3d4938796a95a87b03eb60467 1251 SUPERFAMILY SSF53706 3 1066 0.0 T 01-11-2018 CDA09_07275 e8cf39c3d4938796a95a87b03eb60467 1251 Pfam PF14710 Respiratory nitrate reductase alpha N-terminal 3 40 1.4E-18 T 01-11-2018 IPR028189 Nitrate reductase, alpha subunit, N-terminal KEGG: 00910+1.7.5.1|MetaCyc: PWY-6748 CDA09_07275 e8cf39c3d4938796a95a87b03eb60467 1251 ProSitePatterns PS00551 Prokaryotic molybdopterin oxidoreductases signature 1. 48 66 - T 01-11-2018 IPR027467 Molybdopterin oxidoreductase, molybdopterin cofactor binding site GO:0051539 CDA09_07275 e8cf39c3d4938796a95a87b03eb60467 1251 SMART SM00926 43 105 2.2E-5 T 01-11-2018 IPR006963 Molybdopterin oxidoreductase, 4Fe-4S domain GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 CDA09_07275 e8cf39c3d4938796a95a87b03eb60467 1251 TIGRFAM TIGR01580 narG: nitrate reductase, alpha subunit 2 1232 0.0 T 01-11-2018 IPR006468 Nitrate reductase, alpha subunit GO:0008940|GO:0009325|GO:0042126|GO:0055114 KEGG: 00910+1.7.5.1|MetaCyc: PWY-6748 CDA09_07275 e8cf39c3d4938796a95a87b03eb60467 1251 SUPERFAMILY SSF50692 1077 1230 2.49E-43 T 01-11-2018 IPR009010 Aspartate decarboxylase-like domain superfamily CDA09_07275 e8cf39c3d4938796a95a87b03eb60467 1251 Pfam PF00384 Molybdopterin oxidoreductase 108 826 3.9E-140 T 01-11-2018 IPR006656 Molybdopterin oxidoreductase GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 CDA09_02965 d55e5339b0bf340a214afc26204df273 129 SUPERFAMILY SSF54523 12 129 1.41E-22 T 01-11-2018 CDA09_02965 d55e5339b0bf340a214afc26204df273 129 TIGRFAM TIGR02532 IV_pilin_GFxxxE: prepilin-type N-terminal cleavage/methylation domain 10 32 2.7E-8 T 01-11-2018 IPR012902 Prokaryotic N-terminal methylation site CDA09_02965 d55e5339b0bf340a214afc26204df273 129 ProSitePatterns PS00409 Prokaryotic N-terminal methylation site. 10 30 - T 01-11-2018 IPR012902 Prokaryotic N-terminal methylation site CDA09_02965 d55e5339b0bf340a214afc26204df273 129 Gene3D G3DSA:3.30.700.10 12 127 3.3E-14 T 01-11-2018 CDA09_02965 d55e5339b0bf340a214afc26204df273 129 PRINTS PR00813 Bacterial general secretion pathway protein G signature 47 65 1.5E-8 T 01-11-2018 IPR000983 Bacterial general secretion pathway protein G-type pilin GO:0008565|GO:0015627|GO:0015628 CDA09_02965 d55e5339b0bf340a214afc26204df273 129 PRINTS PR00813 Bacterial general secretion pathway protein G signature 11 36 1.5E-8 T 01-11-2018 IPR000983 Bacterial general secretion pathway protein G-type pilin GO:0008565|GO:0015627|GO:0015628 CDA09_02965 d55e5339b0bf340a214afc26204df273 129 Pfam PF07963 Prokaryotic N-terminal methylation motif 10 31 3.6E-7 T 01-11-2018 IPR012902 Prokaryotic N-terminal methylation site CDA09_07425 b3fc928f40746e61b89865073c346702 389 SUPERFAMILY SSF53901 7 227 1.23E-36 T 01-11-2018 IPR016039 Thiolase-like GO:0003824 CDA09_07425 b3fc928f40746e61b89865073c346702 389 SUPERFAMILY SSF53901 255 370 3.63E-23 T 01-11-2018 IPR016039 Thiolase-like GO:0003824 CDA09_07425 b3fc928f40746e61b89865073c346702 389 Gene3D G3DSA:3.40.47.10 4 382 9.0E-102 T 01-11-2018 IPR016039 Thiolase-like GO:0003824 CDA09_07425 b3fc928f40746e61b89865073c346702 389 Pfam PF00108 Thiolase, N-terminal domain 7 220 6.1E-16 T 01-11-2018 IPR020616 Thiolase, N-terminal GO:0016747 CDA09_07425 b3fc928f40746e61b89865073c346702 389 PIRSF PIRSF000429 1 377 4.0E-51 T 01-11-2018 IPR002155 Thiolase GO:0016747 CDA09_07425 b3fc928f40746e61b89865073c346702 389 Pfam PF02803 Thiolase, C-terminal domain 261 351 1.4E-9 T 01-11-2018 IPR020617 Thiolase, C-terminal GO:0016747 CDA09_18120 c2c58fda34d4a6bc58e67680e77bd03c 127 SUPERFAMILY SSF110069 8 127 2.62E-49 T 01-11-2018 IPR036767 ApaG domain superfamily CDA09_18120 c2c58fda34d4a6bc58e67680e77bd03c 127 Gene3D G3DSA:2.60.40.1470 1 127 4.2E-49 T 01-11-2018 IPR036767 ApaG domain superfamily CDA09_18120 c2c58fda34d4a6bc58e67680e77bd03c 127 Pfam PF04379 ApaG domain 21 104 3.7E-36 T 01-11-2018 IPR007474 ApaG domain CDA09_18120 c2c58fda34d4a6bc58e67680e77bd03c 127 Hamap MF_00791 Protein ApaG [apaG]. 2 127 33.31 T 01-11-2018 IPR023065 Uncharacterised protein family ApaG CDA09_10485 72bfdb346e6968b488a3b59b793ee0fb 93 PIRSF PIRSF030200 1 93 1.3E-42 T 01-11-2018 IPR009359 Phenylacetic acid degradation B CDA09_10485 72bfdb346e6968b488a3b59b793ee0fb 93 TIGRFAM TIGR02157 PA_CoA_Oxy2: phenylacetate-CoA oxygenase, PaaH subunit 4 93 6.2E-41 T 01-11-2018 IPR009359 Phenylacetic acid degradation B CDA09_10485 72bfdb346e6968b488a3b59b793ee0fb 93 Pfam PF06243 Phenylacetic acid degradation B 3 90 4.5E-39 T 01-11-2018 IPR009359 Phenylacetic acid degradation B CDA09_10485 72bfdb346e6968b488a3b59b793ee0fb 93 Gene3D G3DSA:3.10.20.520 1 63 1.4E-31 T 01-11-2018 IPR038693 Phenylacetyl-CoA epoxidase, subunit B CDA09_00510 fa375e3e48731144b0cef6dc4a09c100 289 Pfam PF04280 Tim44-like domain 165 287 9.1E-16 T 01-11-2018 IPR007379 Tim44-like domain CDA09_00510 fa375e3e48731144b0cef6dc4a09c100 289 SUPERFAMILY SSF54427 165 288 2.32E-10 T 01-11-2018 IPR032710 NTF2-like domain superfamily CDA09_00510 fa375e3e48731144b0cef6dc4a09c100 289 SMART SM00978 156 287 4.2E-44 T 01-11-2018 IPR007379 Tim44-like domain CDA09_00510 fa375e3e48731144b0cef6dc4a09c100 289 Gene3D G3DSA:3.10.450.240 164 285 5.9E-6 T 01-11-2018 CDA09_21335 05d3ff2e41220f5d42ce763ce593dfa2 408 Pfam PF06969 HemN C-terminal domain 336 395 1.7E-11 T 01-11-2018 IPR010723 HemN, C-terminal CDA09_21335 05d3ff2e41220f5d42ce763ce593dfa2 408 Gene3D G3DSA:3.80.30.20 12 330 5.9E-96 T 01-11-2018 IPR023404 Radical SAM, alpha/beta horseshoe CDA09_21335 05d3ff2e41220f5d42ce763ce593dfa2 408 TIGRFAM TIGR00539 hemN_rel: putative oxygen-independent coproporphyrinogen III oxidase 35 397 4.4E-109 T 01-11-2018 IPR004559 Oxygen-independent coproporphyrinogen III oxidase-like GO:0004109|GO:0005737|GO:0006779|GO:0055114 CDA09_21335 05d3ff2e41220f5d42ce763ce593dfa2 408 Pfam PF04055 Radical SAM superfamily 38 203 5.4E-16 T 01-11-2018 IPR007197 Radical SAM GO:0003824|GO:0051536 CDA09_21335 05d3ff2e41220f5d42ce763ce593dfa2 408 SUPERFAMILY SSF102114 31 406 8.63E-108 T 01-11-2018 CDA09_21335 05d3ff2e41220f5d42ce763ce593dfa2 408 SMART SM00729 33 249 2.2E-48 T 01-11-2018 IPR006638 Elp3/MiaB/NifB GO:0003824|GO:0051536 CDA09_15820 85ce5725c4b5f9197e011e3284a4a03c 154 SUPERFAMILY SSF52833 9 154 7.11E-48 T 01-11-2018 IPR036249 Thioredoxin-like superfamily CDA09_15820 85ce5725c4b5f9197e011e3284a4a03c 154 Pfam PF00578 AhpC/TSA family 9 132 3.3E-35 T 01-11-2018 IPR000866 Alkyl hydroperoxide reductase subunit C/ Thiol specific antioxidant GO:0016209|GO:0016491|GO:0055114 KEGG: 00480+1.11.1.15|Reactome: R-HSA-3299685 CDA09_15820 85ce5725c4b5f9197e011e3284a4a03c 154 Gene3D G3DSA:3.40.30.10 4 153 3.8E-48 T 01-11-2018 CDA09_15820 85ce5725c4b5f9197e011e3284a4a03c 154 PIRSF PIRSF000239 5 154 9.2E-26 T 01-11-2018 IPR024706 Peroxiredoxin, AhpC-type KEGG: 00480+1.11.1.15|Reactome: R-HSA-3299685 CDA09_02470 0a12e27b63451e61ae11cfb29318058c 206 Hamap MF_00528 Septum formation protein Maf [maf]. 7 206 32.847 T 01-11-2018 IPR003697 Maf-like protein GO:0047429 CDA09_02470 0a12e27b63451e61ae11cfb29318058c 206 Pfam PF02545 Maf-like protein 7 201 2.0E-53 T 01-11-2018 IPR003697 Maf-like protein GO:0047429 CDA09_02470 0a12e27b63451e61ae11cfb29318058c 206 SUPERFAMILY SSF52972 6 200 3.79E-57 T 01-11-2018 IPR029001 Inosine triphosphate pyrophosphatase-like CDA09_02470 0a12e27b63451e61ae11cfb29318058c 206 TIGRFAM TIGR00172 maf: septum formation protein Maf 7 199 1.1E-46 T 01-11-2018 IPR003697 Maf-like protein GO:0047429 CDA09_02470 0a12e27b63451e61ae11cfb29318058c 206 PIRSF PIRSF006305 1 205 1.1E-45 T 01-11-2018 IPR003697 Maf-like protein GO:0047429 CDA09_02470 0a12e27b63451e61ae11cfb29318058c 206 Gene3D G3DSA:3.90.950.10 3 203 6.0E-67 T 01-11-2018 IPR029001 Inosine triphosphate pyrophosphatase-like CDA09_17550 8891f29664944c03c55355c66283cfb9 94 Pfam PF00216 Bacterial DNA-binding protein 1 90 2.1E-28 T 01-11-2018 IPR000119 Histone-like DNA-binding protein GO:0003677 CDA09_17550 8891f29664944c03c55355c66283cfb9 94 SMART SM00411 1 91 3.2E-40 T 01-11-2018 IPR000119 Histone-like DNA-binding protein GO:0003677 CDA09_17550 8891f29664944c03c55355c66283cfb9 94 TIGRFAM TIGR00988 hip: integration host factor, beta subunit 1 92 8.9E-41 T 01-11-2018 IPR005685 Integration host factor, beta subunit GO:0003677|GO:0005694|GO:0006310|GO:0006355 CDA09_17550 8891f29664944c03c55355c66283cfb9 94 Gene3D G3DSA:4.10.520.10 1 94 7.4E-32 T 01-11-2018 IPR010992 Integration host factor (IHF)-like DNA-binding domain superfamily GO:0003677 CDA09_17550 8891f29664944c03c55355c66283cfb9 94 Hamap MF_00381 Integration host factor subunit beta [ihfB]. 1 94 30.101 T 01-11-2018 IPR005685 Integration host factor, beta subunit GO:0003677|GO:0005694|GO:0006310|GO:0006355 CDA09_17550 8891f29664944c03c55355c66283cfb9 94 SUPERFAMILY SSF47729 1 91 2.94E-29 T 01-11-2018 IPR010992 Integration host factor (IHF)-like DNA-binding domain superfamily GO:0003677 CDA09_17550 8891f29664944c03c55355c66283cfb9 94 PRINTS PR01727 Prokaryotic integration host factor signature 41 56 5.4E-17 T 01-11-2018 IPR000119 Histone-like DNA-binding protein GO:0003677 CDA09_17550 8891f29664944c03c55355c66283cfb9 94 PRINTS PR01727 Prokaryotic integration host factor signature 75 89 5.4E-17 T 01-11-2018 IPR000119 Histone-like DNA-binding protein GO:0003677 CDA09_17550 8891f29664944c03c55355c66283cfb9 94 PRINTS PR01727 Prokaryotic integration host factor signature 59 72 5.4E-17 T 01-11-2018 IPR000119 Histone-like DNA-binding protein GO:0003677 CDA09_18780 5cd7c3aca6ce437d399c00ce2848b2b8 377 Pfam PF00437 Type II/IV secretion system protein 47 253 4.8E-38 T 01-11-2018 IPR001482 Type II/IV secretion system protein CDA09_18780 5cd7c3aca6ce437d399c00ce2848b2b8 377 Gene3D G3DSA:3.30.450.90 2 107 3.3E-30 T 01-11-2018 CDA09_18780 5cd7c3aca6ce437d399c00ce2848b2b8 377 SUPERFAMILY SSF52540 7 344 1.04E-64 T 01-11-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CDA09_18780 5cd7c3aca6ce437d399c00ce2848b2b8 377 Gene3D G3DSA:3.40.50.300 108 365 3.9E-87 T 01-11-2018 CDA09_18780 5cd7c3aca6ce437d399c00ce2848b2b8 377 TIGRFAM TIGR01420 pilT_fam: twitching motility protein 10 350 2.4E-138 T 01-11-2018 IPR006321 Pilus retraction protein PilT GO:0005524 CDA09_18780 5cd7c3aca6ce437d399c00ce2848b2b8 377 ProSitePatterns PS00662 Bacterial type II secretion system protein E signature. 200 214 - T 01-11-2018 IPR001482 Type II/IV secretion system protein CDA09_17520 8be35c28404de67af293971a7d05fbff 575 SUPERFAMILY SSF51004 149 575 1.7E-125 T 01-11-2018 IPR011048 Cytochrome cd1-nitrite reductase-like, haem d1 domain superfamily CDA09_17520 8be35c28404de67af293971a7d05fbff 575 Pfam PF02239 Cytochrome D1 heme domain 177 570 2.8E-157 T 01-11-2018 CDA09_17520 8be35c28404de67af293971a7d05fbff 575 SUPERFAMILY SSF46626 6 164 6.02E-22 T 01-11-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 CDA09_17520 8be35c28404de67af293971a7d05fbff 575 Gene3D G3DSA:2.140.10.20 149 575 4.4E-201 T 01-11-2018 IPR003143 Cytochrome cd1-nitrite reductase, C-terminal domain superfamily CDA09_17520 8be35c28404de67af293971a7d05fbff 575 Gene3D G3DSA:1.10.760.10 52 148 1.3E-34 T 01-11-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 CDA09_17520 8be35c28404de67af293971a7d05fbff 575 Pfam PF13442 Cytochrome C oxidase, cbb3-type, subunit III 67 140 6.4E-12 T 01-11-2018 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 Reactome: R-HSA-111457|Reactome: R-HSA-111458|Reactome: R-HSA-111459|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 CDA09_19310 b75687cb187e128dea94f8a91f7b3264 389 Gene3D G3DSA:3.40.640.10 60 283 3.0E-127 T 01-11-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 CDA09_19310 b75687cb187e128dea94f8a91f7b3264 389 TIGRFAM TIGR04350 C_S_lyase_PatB: putative C-S lyase 8 381 1.0E-134 T 01-11-2018 IPR027619 Putative C-S lyase KEGG: 00270+4.4.1.8|KEGG: 00450+4.4.1.8 CDA09_19310 b75687cb187e128dea94f8a91f7b3264 389 Pfam PF00155 Aminotransferase class I and II 77 375 1.5E-24 T 01-11-2018 IPR004839 Aminotransferase, class I/classII GO:0009058|GO:0030170 CDA09_19310 b75687cb187e128dea94f8a91f7b3264 389 Gene3D G3DSA:3.90.1150.10 21 375 3.0E-127 T 01-11-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 CDA09_19310 b75687cb187e128dea94f8a91f7b3264 389 SUPERFAMILY SSF53383 6 381 3.99E-91 T 01-11-2018 IPR015424 Pyridoxal phosphate-dependent transferase CDA09_19445 4647991e40602421619267afa2eca461 117 Gene3D G3DSA:3.30.420.100 1 117 1.1E-43 T 01-11-2018 CDA09_19445 4647991e40602421619267afa2eca461 117 SUPERFAMILY SSF53137 3 115 5.45E-51 T 01-11-2018 CDA09_19445 4647991e40602421619267afa2eca461 117 Hamap MF_01337_B 50S ribosomal protein L18 [rplR]. 2 117 27.097 T 01-11-2018 IPR004389 Ribosomal protein L18, bacterial-type GO:0003735|GO:0005622|GO:0005840|GO:0006412 CDA09_19445 4647991e40602421619267afa2eca461 117 Pfam PF00861 Ribosomal L18 of archaea, bacteria, mitoch. and chloroplast 2 117 3.2E-39 T 01-11-2018 IPR005484 Ribosomal protein L18 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 CDA09_19445 4647991e40602421619267afa2eca461 117 TIGRFAM TIGR00060 L18_bact: ribosomal protein uL18 4 117 6.2E-38 T 01-11-2018 IPR004389 Ribosomal protein L18, bacterial-type GO:0003735|GO:0005622|GO:0005840|GO:0006412 CDA09_20070 fce3ca8d0de10b2fe55ab994899f7163 316 Pfam PF04055 Radical SAM superfamily 43 198 2.4E-14 T 01-11-2018 IPR007197 Radical SAM GO:0003824|GO:0051536 CDA09_20070 fce3ca8d0de10b2fe55ab994899f7163 316 SUPERFAMILY SSF102114 12 252 1.31E-45 T 01-11-2018 CDA09_20070 fce3ca8d0de10b2fe55ab994899f7163 316 Pfam PF16199 Radical_SAM C-terminal domain 207 285 4.2E-17 T 01-11-2018 IPR032432 Radical SAM, C-terminal extension Reactome: R-HSA-3214847 CDA09_20070 fce3ca8d0de10b2fe55ab994899f7163 316 SMART SM00729 23 245 1.3E-41 T 01-11-2018 IPR006638 Elp3/MiaB/NifB GO:0003824|GO:0051536 CDA09_20070 fce3ca8d0de10b2fe55ab994899f7163 316 Gene3D G3DSA:3.80.30.20 42 270 4.7E-15 T 01-11-2018 IPR023404 Radical SAM, alpha/beta horseshoe CDA09_20070 fce3ca8d0de10b2fe55ab994899f7163 316 TIGRFAM TIGR01212 TIGR01212: radical SAM protein, TIGR01212 family 7 297 4.7E-111 T 01-11-2018 IPR005911 Protein YhcC-like GO:0051536 CDA09_13200 f87bf9fc91e8c6d323e9cd654a055a2a 78 Gene3D G3DSA:1.10.150.250 1 77 7.6E-24 T 01-11-2018 IPR036714 Flavinator of succinate dehydrogenase superfamily CDA09_13200 f87bf9fc91e8c6d323e9cd654a055a2a 78 SUPERFAMILY SSF109910 4 75 3.14E-18 T 01-11-2018 IPR036714 Flavinator of succinate dehydrogenase superfamily CDA09_13200 f87bf9fc91e8c6d323e9cd654a055a2a 78 Pfam PF03937 Flavinator of succinate dehydrogenase 5 72 1.9E-18 T 01-11-2018 IPR005631 Flavinator of succinate dehydrogenase CDA09_18430 131cb4086ae2f5baddaf37d73f3b84c3 351 Gene3D G3DSA:3.90.25.10 200 330 1.5E-128 T 01-11-2018 CDA09_18430 131cb4086ae2f5baddaf37d73f3b84c3 351 Pfam PF16363 GDP-mannose 4,6 dehydratase 3 323 1.2E-98 T 01-11-2018 IPR016040 NAD(P)-binding domain CDA09_18430 131cb4086ae2f5baddaf37d73f3b84c3 351 Gene3D G3DSA:3.40.50.720 2 322 1.5E-128 T 01-11-2018 CDA09_18430 131cb4086ae2f5baddaf37d73f3b84c3 351 TIGRFAM TIGR01181 dTDP_gluc_dehyt: dTDP-glucose 4,6-dehydratase 2 335 7.2E-150 T 01-11-2018 IPR005888 dTDP-glucose 4,6-dehydratase GO:0008460|GO:0009225 KEGG: 00521+4.2.1.46|KEGG: 00523+4.2.1.46|KEGG: 00525+4.2.1.46|MetaCyc: PWY-3221|MetaCyc: PWY-6808|MetaCyc: PWY-6942|MetaCyc: PWY-6953|MetaCyc: PWY-6973|MetaCyc: PWY-6974|MetaCyc: PWY-6976|MetaCyc: PWY-7104|MetaCyc: PWY-7301|MetaCyc: PWY-7312|MetaCyc: PWY-7315|MetaCyc: PWY-7316|MetaCyc: PWY-7318|MetaCyc: PWY-7413|MetaCyc: PWY-7414|MetaCyc: PWY-7440|MetaCyc: PWY-7657|MetaCyc: PWY-7688|MetaCyc: PWY-7814 CDA09_18430 131cb4086ae2f5baddaf37d73f3b84c3 351 SUPERFAMILY SSF51735 2 333 2.25E-86 T 01-11-2018 IPR036291 NAD(P)-binding domain superfamily CDA09_00640 e2bf11686a71a7d6d25daa9dd8e496a7 663 SMART SM00304 335 387 3.8E-12 T 01-11-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 CDA09_00640 e2bf11686a71a7d6d25daa9dd8e496a7 663 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 453 630 4.5E-45 T 01-11-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 CDA09_00640 e2bf11686a71a7d6d25daa9dd8e496a7 663 Gene3D G3DSA:1.10.287.950 337 663 2.7E-73 T 01-11-2018 CDA09_00640 e2bf11686a71a7d6d25daa9dd8e496a7 663 Pfam PF17201 Cache 3/Cache 2 fusion domain 47 312 2.8E-84 T 01-11-2018 IPR033462 Cache 3/Cache 2 fusion domain CDA09_00640 e2bf11686a71a7d6d25daa9dd8e496a7 663 Gene3D G3DSA:3.30.450.20 203 316 2.2E-9 T 01-11-2018 CDA09_00640 e2bf11686a71a7d6d25daa9dd8e496a7 663 Pfam PF00672 HAMP domain 338 383 2.4E-10 T 01-11-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 CDA09_00640 e2bf11686a71a7d6d25daa9dd8e496a7 663 SUPERFAMILY SSF58104 356 662 8.63E-72 T 01-11-2018 CDA09_00640 e2bf11686a71a7d6d25daa9dd8e496a7 663 SMART SM00283 402 663 1.7E-70 T 01-11-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 CDA09_00640 e2bf11686a71a7d6d25daa9dd8e496a7 663 SUPERFAMILY SSF103190 86 208 4.32E-13 T 01-11-2018 IPR029151 Periplasmic sensor-like domain superfamily CDA09_01895 2e30ceab882e95ce2fbb345e1870c19d 212 SUPERFAMILY SSF51735 1 211 3.01E-39 T 01-11-2018 IPR036291 NAD(P)-binding domain superfamily CDA09_01895 2e30ceab882e95ce2fbb345e1870c19d 212 Gene3D G3DSA:3.40.50.720 2 211 8.3E-56 T 01-11-2018 CDA09_01895 2e30ceab882e95ce2fbb345e1870c19d 212 Pfam PF13460 NAD(P)H-binding 7 197 2.5E-33 T 01-11-2018 IPR016040 NAD(P)-binding domain CDA09_11230 5d2c9d65b925762425a10787bfd49f6a 107 Pfam PF04267 Sarcosine oxidase, delta subunit family 3 84 2.1E-34 T 01-11-2018 IPR006279 Sarcosine oxidase, delta subunit, heterotetrameric GO:0008115|GO:0046653 KEGG: 00260+1.5.3.1|MetaCyc: PWY-3661|MetaCyc: PWY-4722 CDA09_11230 5d2c9d65b925762425a10787bfd49f6a 107 TIGRFAM TIGR01374 soxD: sarcosine oxidase, delta subunit family 4 86 2.2E-35 T 01-11-2018 IPR006279 Sarcosine oxidase, delta subunit, heterotetrameric GO:0008115|GO:0046653 KEGG: 00260+1.5.3.1|MetaCyc: PWY-3661|MetaCyc: PWY-4722 CDA09_11230 5d2c9d65b925762425a10787bfd49f6a 107 Gene3D G3DSA:3.30.2270.10 1 100 6.3E-36 T 01-11-2018 IPR038561 Sarcosine oxidase subunit delta superfamily KEGG: 00260+1.5.3.1|MetaCyc: PWY-3661|MetaCyc: PWY-4722 CDA09_02175 d806a4080f2b7254e63b0811afc4b747 1606 SUPERFAMILY SSF51735 947 1261 1.58E-28 T 01-11-2018 IPR036291 NAD(P)-binding domain superfamily CDA09_02175 d806a4080f2b7254e63b0811afc4b747 1606 SUPERFAMILY SSF53223 757 942 2.88E-25 T 01-11-2018 CDA09_02175 d806a4080f2b7254e63b0811afc4b747 1606 Pfam PF05088 Bacterial NAD-glutamate dehydrogenase 77 1603 0.0 T 01-11-2018 IPR028971 NAD-glutamate dehydrogenase GO:0004352|GO:0019551 KEGG: 00220+1.4.1.2|KEGG: 00250+1.4.1.2|KEGG: 00430+1.4.1.2|KEGG: 00910+1.4.1.2|MetaCyc: PWY-5022|MetaCyc: PWY-6728|MetaCyc: PWY-7126 CDA09_02175 d806a4080f2b7254e63b0811afc4b747 1606 PIRSF PIRSF036761 3 1606 0.0 T 01-11-2018 IPR007780 NAD-glutamate dehydrogenase, bacteria GO:0004352|GO:0019551 KEGG: 00220+1.4.1.2|KEGG: 00250+1.4.1.2|KEGG: 00430+1.4.1.2|KEGG: 00910+1.4.1.2|MetaCyc: PWY-5022|MetaCyc: PWY-6728|MetaCyc: PWY-7126 CDA09_07920 02ea42c51458ebd3e820ac7452832d33 384 Gene3D G3DSA:3.40.30.10 75 216 1.1E-33 T 01-11-2018 CDA09_07920 02ea42c51458ebd3e820ac7452832d33 384 Pfam PF02630 SCO1/SenC 90 186 3.1E-19 T 01-11-2018 IPR003782 Copper chaperone SCO1/SenC Reactome: R-HSA-5628897|Reactome: R-HSA-611105 CDA09_07920 02ea42c51458ebd3e820ac7452832d33 384 SUPERFAMILY SSF46626 49 343 6.35E-15 T 01-11-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 CDA09_07920 02ea42c51458ebd3e820ac7452832d33 384 SUPERFAMILY SSF52833 83 200 5.73E-32 T 01-11-2018 IPR036249 Thioredoxin-like superfamily CDA09_07920 02ea42c51458ebd3e820ac7452832d33 384 Pfam PF00034 Cytochrome c 260 343 2.9E-9 T 01-11-2018 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 Reactome: R-HSA-111457|Reactome: R-HSA-111458|Reactome: R-HSA-111459|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 CDA09_07920 02ea42c51458ebd3e820ac7452832d33 384 Gene3D G3DSA:1.10.760.10 237 346 5.2E-22 T 01-11-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 CDA09_17690 132bfaa32d0753334e2f843cf093d761 87 Pfam PF09723 Zinc ribbon domain 1 40 7.0E-17 T 01-11-2018 IPR013429 Putative regulatory protein, FmdB, Zinc ribbon domain CDA09_17690 132bfaa32d0753334e2f843cf093d761 87 SMART SM00834 1 42 6.5E-21 T 01-11-2018 IPR013429 Putative regulatory protein, FmdB, Zinc ribbon domain CDA09_17690 132bfaa32d0753334e2f843cf093d761 87 TIGRFAM TIGR02605 CxxC_CxxC_SSSS: putative regulatory protein, FmdB family 1 52 1.6E-23 T 01-11-2018 IPR013429 Putative regulatory protein, FmdB, Zinc ribbon domain CDA09_01395 8dd05049fd2acd3881ab25ba4e146213 221 SUPERFAMILY SSF48695 140 208 4.19E-15 T 01-11-2018 IPR036280 Multiheme cytochrome superfamily CDA09_01395 8dd05049fd2acd3881ab25ba4e146213 221 Gene3D G3DSA:3.90.10.10 138 210 9.1E-17 T 01-11-2018 CDA09_01395 8dd05049fd2acd3881ab25ba4e146213 221 Pfam PF14522 Cytochrome c7 and related cytochrome c 149 209 5.3E-6 T 01-11-2018 IPR029467 C-type polyheme cytochrome OmcB CDA09_01395 8dd05049fd2acd3881ab25ba4e146213 221 TIGRFAM TIGR04257 nanowire_3heme: c(7)-type cytochrome triheme domain 145 209 6.5E-18 T 01-11-2018 IPR026352 C(7)-type cytochrome triheme domain CDA09_16850 27debc9fbc8e1b27304489d2fcda7d0b 170 Pfam PF05751 FixH 15 154 2.6E-43 T 01-11-2018 IPR008620 Nitrogen fixation protein FixH CDA09_06755 ad552b01f553aac1a2642f6245258962 481 SUPERFAMILY SSF64518 166 478 5.1E-33 T 01-11-2018 CDA09_06755 ad552b01f553aac1a2642f6245258962 481 TIGRFAM TIGR02492 flgK_ends: flagellar hook-associated protein FlgK 4 478 3.9E-107 T 01-11-2018 IPR002371 Flagellar hook-associated protein 1 GO:0005198|GO:0009424|GO:0044780 CDA09_06755 ad552b01f553aac1a2642f6245258962 481 Pfam PF06429 Flagellar basal body rod FlgEFG protein C-terminal 430 478 1.4E-9 T 01-11-2018 IPR010930 Flagellar basal-body/hook protein, C-terminal domain CDA09_06755 ad552b01f553aac1a2642f6245258962 481 PRINTS PR01005 Flagellar hook-associated protein signature 11 34 1.3E-20 T 01-11-2018 IPR002371 Flagellar hook-associated protein 1 GO:0005198|GO:0009424|GO:0044780 CDA09_06755 ad552b01f553aac1a2642f6245258962 481 PRINTS PR01005 Flagellar hook-associated protein signature 123 143 1.3E-20 T 01-11-2018 IPR002371 Flagellar hook-associated protein 1 GO:0005198|GO:0009424|GO:0044780 CDA09_06755 ad552b01f553aac1a2642f6245258962 481 PRINTS PR01005 Flagellar hook-associated protein signature 156 180 1.3E-20 T 01-11-2018 IPR002371 Flagellar hook-associated protein 1 GO:0005198|GO:0009424|GO:0044780 CDA09_06755 ad552b01f553aac1a2642f6245258962 481 PRINTS PR01005 Flagellar hook-associated protein signature 263 285 1.3E-20 T 01-11-2018 IPR002371 Flagellar hook-associated protein 1 GO:0005198|GO:0009424|GO:0044780 CDA09_06755 ad552b01f553aac1a2642f6245258962 481 PRINTS PR01005 Flagellar hook-associated protein signature 49 71 1.3E-20 T 01-11-2018 IPR002371 Flagellar hook-associated protein 1 GO:0005198|GO:0009424|GO:0044780 CDA09_05910 2c100a6313f5520b0932ebb08d7362db 265 SUPERFAMILY SSF52540 9 236 2.6E-66 T 01-11-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CDA09_05910 2c100a6313f5520b0932ebb08d7362db 265 SMART SM00382 33 217 5.3E-18 T 01-11-2018 IPR003593 AAA+ ATPase domain CDA09_05910 2c100a6313f5520b0932ebb08d7362db 265 Gene3D G3DSA:3.40.50.300 6 259 3.1E-61 T 01-11-2018 CDA09_05910 2c100a6313f5520b0932ebb08d7362db 265 ProSitePatterns PS00211 ABC transporters family signature. 138 152 - T 01-11-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 CDA09_05910 2c100a6313f5520b0932ebb08d7362db 265 Pfam PF00005 ABC transporter 24 165 1.6E-28 T 01-11-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 CDA09_10515 0ffcc6ca518dcb5dd11d0bb0de78418b 401 ProSitePatterns PS00737 Thiolases signature 2. 347 363 - T 01-11-2018 IPR020613 Thiolase, conserved site GO:0016747 CDA09_10515 0ffcc6ca518dcb5dd11d0bb0de78418b 401 TIGRFAM TIGR02430 pcaF: 3-oxoadipyl-CoA thiolase 3 401 8.2E-229 T 01-11-2018 IPR012793 Beta-ketoadipyl CoA thiolase GO:0016747|GO:0019619 KEGG: 00360+2.3.1.174|KEGG: 00362+2.3.1.174|MetaCyc: PWY-1361|MetaCyc: PWY-2361|MetaCyc: PWY-6185 CDA09_10515 0ffcc6ca518dcb5dd11d0bb0de78418b 401 TIGRFAM TIGR01930 AcCoA-C-Actrans: acetyl-CoA C-acyltransferase 6 399 1.9E-138 T 01-11-2018 IPR002155 Thiolase GO:0016747 CDA09_10515 0ffcc6ca518dcb5dd11d0bb0de78418b 401 Gene3D G3DSA:3.40.47.10 141 398 1.7E-157 T 01-11-2018 IPR016039 Thiolase-like GO:0003824 CDA09_10515 0ffcc6ca518dcb5dd11d0bb0de78418b 401 Pfam PF00108 Thiolase, N-terminal domain 5 268 2.9E-77 T 01-11-2018 IPR020616 Thiolase, N-terminal GO:0016747 CDA09_10515 0ffcc6ca518dcb5dd11d0bb0de78418b 401 PIRSF PIRSF000429 1 401 2.1E-134 T 01-11-2018 IPR002155 Thiolase GO:0016747 CDA09_10515 0ffcc6ca518dcb5dd11d0bb0de78418b 401 SUPERFAMILY SSF53901 3 276 8.52E-83 T 01-11-2018 IPR016039 Thiolase-like GO:0003824 CDA09_10515 0ffcc6ca518dcb5dd11d0bb0de78418b 401 Pfam PF02803 Thiolase, C-terminal domain 276 400 7.1E-46 T 01-11-2018 IPR020617 Thiolase, C-terminal GO:0016747 CDA09_10515 0ffcc6ca518dcb5dd11d0bb0de78418b 401 SUPERFAMILY SSF53901 277 400 4.32E-45 T 01-11-2018 IPR016039 Thiolase-like GO:0003824 CDA09_10515 0ffcc6ca518dcb5dd11d0bb0de78418b 401 ProSitePatterns PS00099 Thiolases active site. 382 395 - T 01-11-2018 IPR020610 Thiolase, active site GO:0016747 CDA09_10515 0ffcc6ca518dcb5dd11d0bb0de78418b 401 ProSitePatterns PS00098 Thiolases acyl-enzyme intermediate signature. 86 104 - T 01-11-2018 IPR020615 Thiolase, acyl-enzyme intermediate active site GO:0016747 CDA09_10515 0ffcc6ca518dcb5dd11d0bb0de78418b 401 Gene3D G3DSA:3.40.47.10 6 282 1.7E-157 T 01-11-2018 IPR016039 Thiolase-like GO:0003824 CDA09_22745 9a6698eaf4e158cec69bb9169f590784 414 TIGRFAM TIGR03224 benzo_boxA: benzoyl-CoA oxygenase/reductase, BoxA protein 11 414 1.7E-231 T 01-11-2018 IPR017634 Benzoyl-CoA oxygenase/reductase, BoxA protein KEGG: 00362+1.14.13.208|MetaCyc: PWY-1361 CDA09_22745 9a6698eaf4e158cec69bb9169f590784 414 Gene3D G3DSA:3.30.70.20 7 101 4.9E-13 T 01-11-2018 CDA09_22745 9a6698eaf4e158cec69bb9169f590784 414 Pfam PF00037 4Fe-4S binding domain 44 66 5.4E-5 T 01-11-2018 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain CDA09_22745 9a6698eaf4e158cec69bb9169f590784 414 Pfam PF00037 4Fe-4S binding domain 16 37 9.5E-8 T 01-11-2018 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain CDA09_22745 9a6698eaf4e158cec69bb9169f590784 414 PIRSF PIRSF000361 71 414 3.3E-77 T 01-11-2018 IPR015701 Ferredoxin--NADP reductase GO:0016491|GO:0055114 KEGG: 00195+1.18.1.2|MetaCyc: PWY-101 CDA09_22745 9a6698eaf4e158cec69bb9169f590784 414 PIRSF PIRSF501177 1 414 5.6E-218 T 01-11-2018 IPR017634 Benzoyl-CoA oxygenase/reductase, BoxA protein KEGG: 00362+1.14.13.208|MetaCyc: PWY-1361 CDA09_22745 9a6698eaf4e158cec69bb9169f590784 414 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 50 61 - T 01-11-2018 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site CDA09_22745 9a6698eaf4e158cec69bb9169f590784 414 Pfam PF00970 Oxidoreductase FAD-binding domain 199 262 1.7E-4 T 01-11-2018 IPR008333 Flavoprotein pyridine nucleotide cytochrome reductase-like, FAD-binding domain Reactome: R-HSA-1237044 CDA09_22745 9a6698eaf4e158cec69bb9169f590784 414 SUPERFAMILY SSF54862 14 74 1.75E-18 T 01-11-2018 CDA09_22745 9a6698eaf4e158cec69bb9169f590784 414 Gene3D G3DSA:2.40.30.10 118 259 2.8E-42 T 01-11-2018 CDA09_22745 9a6698eaf4e158cec69bb9169f590784 414 Gene3D G3DSA:3.40.50.80 262 414 6.9E-35 T 01-11-2018 IPR039261 Ferredoxin-NADP reductase (FNR), nucleotide-binding domain CDA09_22745 9a6698eaf4e158cec69bb9169f590784 414 SUPERFAMILY SSF52343 263 414 2.88E-32 T 01-11-2018 IPR039261 Ferredoxin-NADP reductase (FNR), nucleotide-binding domain CDA09_22745 9a6698eaf4e158cec69bb9169f590784 414 Pfam PF00175 Oxidoreductase NAD-binding domain 275 381 1.5E-14 T 01-11-2018 IPR001433 Oxidoreductase FAD/NAD(P)-binding GO:0016491|GO:0055114 CDA09_22745 9a6698eaf4e158cec69bb9169f590784 414 PRINTS PR00371 Flavoprotein pyridine nucleotide cytochrome reductase signature 179 189 2.7E-19 T 01-11-2018 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase GO:0016491|GO:0055114 CDA09_22745 9a6698eaf4e158cec69bb9169f590784 414 PRINTS PR00371 Flavoprotein pyridine nucleotide cytochrome reductase signature 368 376 2.7E-19 T 01-11-2018 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase GO:0016491|GO:0055114 CDA09_22745 9a6698eaf4e158cec69bb9169f590784 414 PRINTS PR00371 Flavoprotein pyridine nucleotide cytochrome reductase signature 344 360 2.7E-19 T 01-11-2018 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase GO:0016491|GO:0055114 CDA09_22745 9a6698eaf4e158cec69bb9169f590784 414 PRINTS PR00371 Flavoprotein pyridine nucleotide cytochrome reductase signature 238 247 2.7E-19 T 01-11-2018 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase GO:0016491|GO:0055114 CDA09_22745 9a6698eaf4e158cec69bb9169f590784 414 PRINTS PR00371 Flavoprotein pyridine nucleotide cytochrome reductase signature 274 293 2.7E-19 T 01-11-2018 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase GO:0016491|GO:0055114 CDA09_22745 9a6698eaf4e158cec69bb9169f590784 414 PRINTS PR00371 Flavoprotein pyridine nucleotide cytochrome reductase signature 302 311 2.7E-19 T 01-11-2018 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase GO:0016491|GO:0055114 CDA09_22745 9a6698eaf4e158cec69bb9169f590784 414 PRINTS PR00371 Flavoprotein pyridine nucleotide cytochrome reductase signature 202 209 2.7E-19 T 01-11-2018 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase GO:0016491|GO:0055114 CDA09_22745 9a6698eaf4e158cec69bb9169f590784 414 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 21 32 - T 01-11-2018 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site CDA09_22745 9a6698eaf4e158cec69bb9169f590784 414 SUPERFAMILY SSF63380 130 267 3.41E-38 T 01-11-2018 IPR017938 Riboflavin synthase-like beta-barrel CDA09_18070 83ae3c3535130173d5558c1b6a6a0899 115 SUPERFAMILY SSF69754 1 94 2.35E-11 T 01-11-2018 IPR036567 Ribosome hibernation promotion factor-like CDA09_18070 83ae3c3535130173d5558c1b6a6a0899 115 Pfam PF02482 Sigma 54 modulation protein / S30EA ribosomal protein 4 99 1.6E-5 T 01-11-2018 IPR003489 Ribosome hibernation promoting factor/RaiA GO:0044238 CDA09_18070 83ae3c3535130173d5558c1b6a6a0899 115 Gene3D G3DSA:3.30.160.100 3 104 1.4E-5 T 01-11-2018 IPR036567 Ribosome hibernation promotion factor-like CDA09_15130 6ba16a4f4865662280c997c05af08ad6 816 SUPERFAMILY SSF52540 399 739 8.9E-50 T 01-11-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CDA09_15130 6ba16a4f4865662280c997c05af08ad6 816 Pfam PF03135 CagE, TrbE, VirB family, component of type IV transporter system 181 388 2.8E-12 T 01-11-2018 IPR018145 CagE, TrbE, VirB component of type IV transporter system, central domain GO:0005524 CDA09_15130 6ba16a4f4865662280c997c05af08ad6 816 Gene3D G3DSA:3.40.50.300 417 511 2.4E-6 T 01-11-2018 CDA09_15130 6ba16a4f4865662280c997c05af08ad6 816 Gene3D G3DSA:3.40.50.300 559 759 9.6E-25 T 01-11-2018 CDA09_15130 6ba16a4f4865662280c997c05af08ad6 816 SMART SM00382 440 704 3.6E-7 T 01-11-2018 IPR003593 AAA+ ATPase domain CDA09_06855 2d19a56ce85ee692cd7d28b8f4ae7b03 256 Pfam PF07238 PilZ domain 128 244 1.4E-12 T 01-11-2018 IPR009875 PilZ domain GO:0035438 CDA09_06855 2d19a56ce85ee692cd7d28b8f4ae7b03 256 Hamap MF_01457 Flagellar brake protein YcgR [ycgR]. 17 254 28.643 T 01-11-2018 IPR023787 Type III secretion system flagellar brake protein YcgR GO:0035438|GO:0071945 CDA09_06855 2d19a56ce85ee692cd7d28b8f4ae7b03 256 Gene3D G3DSA:2.40.10.220 129 249 3.7E-26 T 01-11-2018 CDA09_06855 2d19a56ce85ee692cd7d28b8f4ae7b03 256 Pfam PF07317 Flagellar regulator YcgR 22 126 2.1E-23 T 01-11-2018 IPR009926 Type III secretion system flagellar brake protein YcgR, N-terminal CDA09_22100 37d315aea79f4c8798e40bb70faf4b65 389 SUPERFAMILY SSF52151 1 378 2.04E-29 T 01-11-2018 IPR016035 Acyl transferase/acyl hydrolase/lysophospholipase CDA09_22100 37d315aea79f4c8798e40bb70faf4b65 389 Gene3D G3DSA:3.40.1090.10 1 72 4.1E-15 T 01-11-2018 CDA09_22100 37d315aea79f4c8798e40bb70faf4b65 389 Pfam PF01734 Patatin-like phospholipase 8 252 2.8E-18 T 01-11-2018 IPR002641 Patatin-like phospholipase domain GO:0006629 CDA09_11615 9594953c0abbeff8ab33952bb1897805 425 Gene3D G3DSA:2.40.160.180 132 425 4.0E-16 T 01-11-2018 IPR038673 Carbohydrate-selective porin OprB superfamily CDA09_11615 9594953c0abbeff8ab33952bb1897805 425 Pfam PF04966 Carbohydrate-selective porin, OprB family 55 425 4.3E-37 T 01-11-2018 IPR007049 Carbohydrate-selective porin OprB GO:0008643|GO:0015288|GO:0016021 CDA09_03155 9b800dd60d4d28652215c92b88aec941 507 Pfam PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion 119 330 1.3E-75 T 01-11-2018 IPR032317 RND efflux pump, membrane fusion protein, barrel-sandwich domain CDA09_03155 9b800dd60d4d28652215c92b88aec941 507 Pfam PF11604 Copper binding periplasmic protein CusF 434 498 2.2E-19 T 01-11-2018 IPR021647 Copper binding periplasmic protein CusF CDA09_03155 9b800dd60d4d28652215c92b88aec941 507 Gene3D G3DSA:2.40.50.100 136 179 5.6E-8 T 01-11-2018 CDA09_03155 9b800dd60d4d28652215c92b88aec941 507 TIGRFAM TIGR01730 RND_mfp: efflux transporter, RND family, MFP subunit 227 406 1.3E-33 T 01-11-2018 IPR006143 RND efflux pump, membrane fusion protein GO:0005215|GO:0016020|GO:0055085 CDA09_03155 9b800dd60d4d28652215c92b88aec941 507 Gene3D G3DSA:1.10.287.470 182 207 1.3E-30 T 01-11-2018 CDA09_03155 9b800dd60d4d28652215c92b88aec941 507 Gene3D G3DSA:2.40.420.20 337 429 6.3E-21 T 01-11-2018 CDA09_03155 9b800dd60d4d28652215c92b88aec941 507 Gene3D G3DSA:2.40.50.320 430 505 2.9E-23 T 01-11-2018 CDA09_03155 9b800dd60d4d28652215c92b88aec941 507 SUPERFAMILY SSF111369 139 333 1.12E-13 T 01-11-2018 CDA09_03155 9b800dd60d4d28652215c92b88aec941 507 Gene3D G3DSA:2.40.50.100 208 257 1.3E-30 T 01-11-2018 CDA09_03155 9b800dd60d4d28652215c92b88aec941 507 Gene3D G3DSA:2.40.30.170 258 332 1.3E-30 T 01-11-2018 CDA09_06380 f2ed5648fcc1dedc3a4893a9a97b97e2 85 Gene3D G3DSA:3.30.1450.10 20 84 2.0E-7 T 01-11-2018 IPR037873 BamE-like CDA09_06380 f2ed5648fcc1dedc3a4893a9a97b97e2 85 Pfam PF12978 Domain of Unknown Function with PDB structure (DUF3862) 20 51 2.6E-6 T 01-11-2018 IPR024418 Protein of unknown function DUF3862 CDA09_22690 d7b0133af1b39de06dcf240fc67fa5b4 252 ProSitePatterns PS00211 ABC transporters family signature. 153 167 - T 01-11-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 CDA09_22690 d7b0133af1b39de06dcf240fc67fa5b4 252 Gene3D G3DSA:3.40.50.300 16 252 1.7E-59 T 01-11-2018 CDA09_22690 d7b0133af1b39de06dcf240fc67fa5b4 252 SMART SM00382 45 229 1.8E-10 T 01-11-2018 IPR003593 AAA+ ATPase domain CDA09_22690 d7b0133af1b39de06dcf240fc67fa5b4 252 SUPERFAMILY SSF52540 20 247 2.55E-58 T 01-11-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CDA09_22690 d7b0133af1b39de06dcf240fc67fa5b4 252 Pfam PF00005 ABC transporter 36 180 5.3E-31 T 01-11-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 CDA09_19100 72f392169f9069b114c84282071646d3 137 Hamap MF_00265 tRNA(fMet)-specific endonuclease VapC [vapC]. 7 127 9.507 T 01-11-2018 IPR022907 VapC family GO:0004540 CDA09_19100 72f392169f9069b114c84282071646d3 137 Pfam PF13470 PIN domain 8 113 8.3E-15 T 01-11-2018 IPR002716 PIN domain CDA09_19100 72f392169f9069b114c84282071646d3 137 SUPERFAMILY SSF88723 8 130 5.0E-13 T 01-11-2018 IPR029060 PIN-like domain superfamily CDA09_19100 72f392169f9069b114c84282071646d3 137 TIGRFAM TIGR00305 TIGR00305: putative toxin-antitoxin system toxin component, PIN family 8 119 1.8E-22 T 01-11-2018 IPR002850 PIN family, putative toxin-antitoxin system toxin component CDA09_20475 f587ae2c7075b4bc9af04a8078ad7999 266 Pfam PF00378 Enoyl-CoA hydratase/isomerase 10 264 9.9E-55 T 01-11-2018 IPR001753 Enoyl-CoA hydratase/isomerase GO:0003824 CDA09_20475 f587ae2c7075b4bc9af04a8078ad7999 266 SUPERFAMILY SSF52096 2 265 3.95E-79 T 01-11-2018 IPR029045 ClpP/crotonase-like domain superfamily CDA09_20475 f587ae2c7075b4bc9af04a8078ad7999 266 Gene3D G3DSA:1.10.12.10 210 265 5.1E-18 T 01-11-2018 IPR014748 Enoyl-CoA hydratase, C-terminal CDA09_20475 f587ae2c7075b4bc9af04a8078ad7999 266 Gene3D G3DSA:3.90.226.10 1 206 3.7E-62 T 01-11-2018 CDA09_19840 f1df0f36e79275f65c38ab70e3f64f94 515 SUPERFAMILY SSF55874 333 496 1.83E-37 T 01-11-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily CDA09_19840 f1df0f36e79275f65c38ab70e3f64f94 515 SUPERFAMILY SSF47384 265 345 1.39E-15 T 01-11-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 CDA09_19840 f1df0f36e79275f65c38ab70e3f64f94 515 Gene3D G3DSA:3.30.565.10 351 498 5.1E-31 T 01-11-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily CDA09_19840 f1df0f36e79275f65c38ab70e3f64f94 515 Pfam PF00512 His Kinase A (phospho-acceptor) domain 281 344 1.7E-12 T 01-11-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 CDA09_19840 f1df0f36e79275f65c38ab70e3f64f94 515 PRINTS PR00344 Bacterial sensor protein C-terminal signature 482 495 1.8E-9 T 01-11-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 CDA09_19840 f1df0f36e79275f65c38ab70e3f64f94 515 PRINTS PR00344 Bacterial sensor protein C-terminal signature 458 476 1.8E-9 T 01-11-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 CDA09_19840 f1df0f36e79275f65c38ab70e3f64f94 515 PRINTS PR00344 Bacterial sensor protein C-terminal signature 425 439 1.8E-9 T 01-11-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 CDA09_19840 f1df0f36e79275f65c38ab70e3f64f94 515 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 393 495 1.1E-17 T 01-11-2018 IPR003594 Histidine kinase/HSP90-like ATPase CDA09_19840 f1df0f36e79275f65c38ab70e3f64f94 515 SMART SM00388 277 344 4.2E-15 T 01-11-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 CDA09_19840 f1df0f36e79275f65c38ab70e3f64f94 515 SMART SM00387 388 498 3.4E-29 T 01-11-2018 IPR003594 Histidine kinase/HSP90-like ATPase CDA09_19840 f1df0f36e79275f65c38ab70e3f64f94 515 Gene3D G3DSA:3.30.450.40 124 268 3.0E-17 T 01-11-2018 IPR029016 GAF-like domain superfamily CDA09_19840 f1df0f36e79275f65c38ab70e3f64f94 515 Pfam PF13493 Domain of unknown function (DUF4118) 16 120 1.3E-27 T 01-11-2018 IPR025201 Sensor protein KdpD, transmembrane domain CDA09_19840 f1df0f36e79275f65c38ab70e3f64f94 515 Gene3D G3DSA:1.20.120.620 11 114 3.7E-31 T 01-11-2018 IPR038318 KdpD, transmembrane domain superfamily CDA09_19840 f1df0f36e79275f65c38ab70e3f64f94 515 Gene3D G3DSA:1.10.287.130 269 346 1.0E-16 T 01-11-2018 CDA09_18255 c2c8aaaac1be365fe97cf3eba6797a1d 139 SUPERFAMILY SSF52980 23 121 9.01E-18 T 01-11-2018 IPR011335 Restriction endonuclease type II-like Reactome: R-HSA-6783310 CDA09_18255 c2c8aaaac1be365fe97cf3eba6797a1d 139 TIGRFAM TIGR00252 TIGR00252: TIGR00252 family protein 20 135 5.1E-27 T 01-11-2018 IPR003509 Uncharacterised protein family UPF0102 CDA09_18255 c2c8aaaac1be365fe97cf3eba6797a1d 139 Gene3D G3DSA:3.40.1350.10 26 138 2.3E-29 T 01-11-2018 IPR011856 tRNA endonuclease-like domain superfamily GO:0003676|GO:0004518 CDA09_18255 c2c8aaaac1be365fe97cf3eba6797a1d 139 Hamap MF_00048 UPF0102 protein YraN [yraN]. 20 132 21.021 T 01-11-2018 IPR003509 Uncharacterised protein family UPF0102 CDA09_18255 c2c8aaaac1be365fe97cf3eba6797a1d 139 Pfam PF02021 Uncharacterised protein family UPF0102 27 118 9.9E-25 T 01-11-2018 IPR003509 Uncharacterised protein family UPF0102 CDA09_03620 01be2a988a032be83bafe1a91933f45c 218 TIGRFAM TIGR03352 VI_chp_3: type VI secretion lipoprotein, VC_A0113 family 25 193 3.4E-25 T 01-11-2018 IPR017734 Type VI secretion system, lipoprotein SciN CDA09_03620 01be2a988a032be83bafe1a91933f45c 218 Pfam PF12790 Type VI secretion lipoprotein, VasD, EvfM, TssJ, VC_A0113 34 190 1.0E-27 T 01-11-2018 IPR017734 Type VI secretion system, lipoprotein SciN CDA09_03620 01be2a988a032be83bafe1a91933f45c 218 Gene3D G3DSA:2.60.40.4150 69 198 3.2E-30 T 01-11-2018 IPR038706 Type VI secretion protein SciN-like superfamily CDA09_10070 8d642dfa6ff1569b1ae968ff04aa3136 406 SUPERFAMILY SSF89796 4 405 1.11E-102 T 01-11-2018 IPR023606 CoA-transferase family III domain superfamily CDA09_10070 8d642dfa6ff1569b1ae968ff04aa3136 406 Pfam PF02515 CoA-transferase family III 7 381 1.2E-99 T 01-11-2018 IPR003673 CoA-transferase family III GO:0003824 CDA09_10070 8d642dfa6ff1569b1ae968ff04aa3136 406 Gene3D G3DSA:3.30.1540.10 240 333 7.6E-118 T 01-11-2018 CDA09_10070 8d642dfa6ff1569b1ae968ff04aa3136 406 Gene3D G3DSA:3.40.50.10540 6 399 7.6E-118 T 01-11-2018 IPR023606 CoA-transferase family III domain superfamily CDA09_13440 c7d27c072dcd4cdc2396618b054ef003 243 SUPERFAMILY SSF51735 4 235 1.02E-43 T 01-11-2018 IPR036291 NAD(P)-binding domain superfamily CDA09_13440 c7d27c072dcd4cdc2396618b054ef003 243 Gene3D G3DSA:3.40.50.720 1 243 1.2E-51 T 01-11-2018 CDA09_13440 c7d27c072dcd4cdc2396618b054ef003 243 Pfam PF00106 short chain dehydrogenase 5 186 8.4E-30 T 01-11-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CDA09_13440 c7d27c072dcd4cdc2396618b054ef003 243 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 6 23 2.8E-10 T 01-11-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CDA09_13440 c7d27c072dcd4cdc2396618b054ef003 243 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 132 148 2.8E-10 T 01-11-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CDA09_13440 c7d27c072dcd4cdc2396618b054ef003 243 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 158 177 2.8E-10 T 01-11-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CDA09_13440 c7d27c072dcd4cdc2396618b054ef003 243 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 80 91 2.8E-10 T 01-11-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CDA09_17200 7e4c5e804b64ec9c644fc07e5756115e 284 Pfam PF04055 Radical SAM superfamily 42 206 1.5E-10 T 01-11-2018 IPR007197 Radical SAM GO:0003824|GO:0051536 CDA09_17200 7e4c5e804b64ec9c644fc07e5756115e 284 SUPERFAMILY SSF102114 38 237 2.88E-14 T 01-11-2018 CDA09_17200 7e4c5e804b64ec9c644fc07e5756115e 284 Gene3D G3DSA:3.20.20.70 36 241 1.5E-13 T 01-11-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 CDA09_06450 58aca477005cd3acb82872bec5e2e9c8 294 PIRSF PIRSF000103 1 292 1.4E-72 T 01-11-2018 IPR015815 3-hydroxyisobutyrate dehydrogenase-related GO:0016491|GO:0055114 Reactome: R-HSA-70895 CDA09_06450 58aca477005cd3acb82872bec5e2e9c8 294 TIGRFAM TIGR01505 tartro_sem_red: 2-hydroxy-3-oxopropionate reductase 4 291 4.8E-125 T 01-11-2018 IPR006398 2-hydroxy-3-oxopropionate reductase GO:0008679|GO:0046487|GO:0055114 KEGG: 00630+1.1.1.60 CDA09_06450 58aca477005cd3acb82872bec5e2e9c8 294 Gene3D G3DSA:1.10.1040.10 160 293 2.0E-40 T 01-11-2018 IPR013328 6-phosphogluconate dehydrogenase, domain 2 GO:0016491|GO:0055114 CDA09_06450 58aca477005cd3acb82872bec5e2e9c8 294 SUPERFAMILY SSF48179 163 291 3.29E-38 T 01-11-2018 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily GO:0055114 CDA09_06450 58aca477005cd3acb82872bec5e2e9c8 294 Pfam PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase 164 284 8.2E-40 T 01-11-2018 IPR029154 3-hydroxyisobutyrate dehydrogenase, NAD-binding domain GO:0051287 CDA09_06450 58aca477005cd3acb82872bec5e2e9c8 294 Pfam PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase 3 161 1.4E-48 T 01-11-2018 IPR006115 6-phosphogluconate dehydrogenase, NADP-binding GO:0050661 CDA09_06450 58aca477005cd3acb82872bec5e2e9c8 294 SUPERFAMILY SSF51735 2 161 4.27E-45 T 01-11-2018 IPR036291 NAD(P)-binding domain superfamily CDA09_06450 58aca477005cd3acb82872bec5e2e9c8 294 ProSitePatterns PS00895 3-hydroxyisobutyrate dehydrogenase signature. 6 19 - T 01-11-2018 IPR002204 3-hydroxyisobutyrate dehydrogenase-related, conserved site GO:0016491|GO:0055114 Reactome: R-HSA-70895 CDA09_06450 58aca477005cd3acb82872bec5e2e9c8 294 Gene3D G3DSA:3.40.50.720 1 159 1.6E-51 T 01-11-2018 CDA09_07595 5097018571c38bc16d42d2a1ff487e66 433 Gene3D G3DSA:1.10.3860.10 1 417 6.1E-119 T 01-11-2018 IPR036458 Sodium:dicarboxylate symporter superfamily GO:0015293|GO:0016021 CDA09_07595 5097018571c38bc16d42d2a1ff487e66 433 Pfam PF00375 Sodium:dicarboxylate symporter family 6 404 6.6E-112 T 01-11-2018 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 CDA09_07595 5097018571c38bc16d42d2a1ff487e66 433 PRINTS PR00173 Glutamate-aspartate symporter signature 196 215 1.8E-46 T 01-11-2018 CDA09_07595 5097018571c38bc16d42d2a1ff487e66 433 PRINTS PR00173 Glutamate-aspartate symporter signature 4 24 1.8E-46 T 01-11-2018 CDA09_07595 5097018571c38bc16d42d2a1ff487e66 433 PRINTS PR00173 Glutamate-aspartate symporter signature 148 170 1.8E-46 T 01-11-2018 CDA09_07595 5097018571c38bc16d42d2a1ff487e66 433 PRINTS PR00173 Glutamate-aspartate symporter signature 331 350 1.8E-46 T 01-11-2018 CDA09_07595 5097018571c38bc16d42d2a1ff487e66 433 PRINTS PR00173 Glutamate-aspartate symporter signature 51 71 1.8E-46 T 01-11-2018 CDA09_07595 5097018571c38bc16d42d2a1ff487e66 433 PRINTS PR00173 Glutamate-aspartate symporter signature 81 106 1.8E-46 T 01-11-2018 CDA09_07595 5097018571c38bc16d42d2a1ff487e66 433 PRINTS PR00173 Glutamate-aspartate symporter signature 296 322 1.8E-46 T 01-11-2018 CDA09_07595 5097018571c38bc16d42d2a1ff487e66 433 PRINTS PR00173 Glutamate-aspartate symporter signature 358 378 1.8E-46 T 01-11-2018 CDA09_07595 5097018571c38bc16d42d2a1ff487e66 433 SUPERFAMILY SSF118215 6 405 1.09E-115 T 01-11-2018 IPR036458 Sodium:dicarboxylate symporter superfamily GO:0015293|GO:0016021 CDA09_09220 1b8d9181e64c02647b96ad472d6f7639 375 Pfam PF02770 Acyl-CoA dehydrogenase, middle domain 133 213 5.8E-10 T 01-11-2018 IPR006091 Acyl-CoA oxidase/dehydrogenase, central domain GO:0016627|GO:0055114 CDA09_09220 1b8d9181e64c02647b96ad472d6f7639 375 Gene3D G3DSA:1.10.540.10 1 118 9.8E-31 T 01-11-2018 IPR037069 Acyl-CoA dehydrogenase/oxidase, N-terminal domain superfamily GO:0016627|GO:0050660|GO:0055114 CDA09_09220 1b8d9181e64c02647b96ad472d6f7639 375 Pfam PF02771 Acyl-CoA dehydrogenase, N-terminal domain 7 117 2.9E-17 T 01-11-2018 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal GO:0016627|GO:0050660|GO:0055114 CDA09_09220 1b8d9181e64c02647b96ad472d6f7639 375 SUPERFAMILY SSF56645 1 221 1.19E-44 T 01-11-2018 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain superfamily GO:0016627|GO:0055114 CDA09_09220 1b8d9181e64c02647b96ad472d6f7639 375 SUPERFAMILY SSF47203 227 372 3.06E-37 T 01-11-2018 IPR036250 Acyl-CoA dehydrogenase-like, C-terminal GO:0016627|GO:0055114 CDA09_09220 1b8d9181e64c02647b96ad472d6f7639 375 Gene3D G3DSA:2.40.110.10 121 231 1.6E-14 T 01-11-2018 CDA09_09220 1b8d9181e64c02647b96ad472d6f7639 375 Pfam PF00441 Acyl-CoA dehydrogenase, C-terminal domain 232 372 9.7E-27 T 01-11-2018 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal GO:0016627|GO:0055114 CDA09_09220 1b8d9181e64c02647b96ad472d6f7639 375 Gene3D G3DSA:1.20.140.10 238 374 2.8E-34 T 01-11-2018 CDA09_21695 f60624445ecf015d98cc26e86abfbfff 121 Pfam PF11190 Protein of unknown function (DUF2976) 34 120 5.4E-33 T 01-11-2018 IPR021356 Integrating conjugative element protein PFL4702 CDA09_21695 f60624445ecf015d98cc26e86abfbfff 121 TIGRFAM TIGR03745 conj_TIGR03745: integrating conjugative element membrane protein, PFL_4702 family 24 121 3.9E-45 T 01-11-2018 IPR021356 Integrating conjugative element protein PFL4702 CDA09_17975 320ba64e3996785e405947ae9fefdb6d 495 TIGRFAM TIGR00564 trpE_most: anthranilate synthase component I 26 483 1.7E-167 T 01-11-2018 IPR005256 Anthranilate synthase component I, PabB-like GO:0000162|GO:0004049 KEGG: 00400+4.1.3.27|KEGG: 00405+4.1.3.27|MetaCyc: PWY-5958|MetaCyc: PWY-6660|MetaCyc: PWY-6661 CDA09_17975 320ba64e3996785e405947ae9fefdb6d 495 Gene3D G3DSA:3.60.120.10 2 492 2.6E-178 T 01-11-2018 IPR005801 ADC synthase GO:0009058 CDA09_17975 320ba64e3996785e405947ae9fefdb6d 495 SUPERFAMILY SSF56322 14 486 1.31E-158 T 01-11-2018 IPR005801 ADC synthase GO:0009058 CDA09_17975 320ba64e3996785e405947ae9fefdb6d 495 Pfam PF00425 chorismate binding enzyme 218 475 6.6E-99 T 01-11-2018 IPR015890 Chorismate-utilising enzyme, C-terminal CDA09_17975 320ba64e3996785e405947ae9fefdb6d 495 PRINTS PR00095 Anthranilate synthase component I signature 432 446 7.2E-22 T 01-11-2018 IPR019999 Anthranilate synthase component I-like GO:0009058 KEGG: 00400+4.1.3.27|KEGG: 00405+4.1.3.27|MetaCyc: PWY-5958|MetaCyc: PWY-6660|MetaCyc: PWY-6661 CDA09_17975 320ba64e3996785e405947ae9fefdb6d 495 PRINTS PR00095 Anthranilate synthase component I signature 323 336 7.2E-22 T 01-11-2018 IPR019999 Anthranilate synthase component I-like GO:0009058 KEGG: 00400+4.1.3.27|KEGG: 00405+4.1.3.27|MetaCyc: PWY-5958|MetaCyc: PWY-6660|MetaCyc: PWY-6661 CDA09_17975 320ba64e3996785e405947ae9fefdb6d 495 PRINTS PR00095 Anthranilate synthase component I signature 337 350 7.2E-22 T 01-11-2018 IPR019999 Anthranilate synthase component I-like GO:0009058 KEGG: 00400+4.1.3.27|KEGG: 00405+4.1.3.27|MetaCyc: PWY-5958|MetaCyc: PWY-6660|MetaCyc: PWY-6661 CDA09_17975 320ba64e3996785e405947ae9fefdb6d 495 PRINTS PR00095 Anthranilate synthase component I signature 417 431 7.2E-22 T 01-11-2018 IPR019999 Anthranilate synthase component I-like GO:0009058 KEGG: 00400+4.1.3.27|KEGG: 00405+4.1.3.27|MetaCyc: PWY-5958|MetaCyc: PWY-6660|MetaCyc: PWY-6661 CDA09_17975 320ba64e3996785e405947ae9fefdb6d 495 Pfam PF04715 Anthranilate synthase component I, N terminal region 26 169 8.7E-30 T 01-11-2018 IPR006805 Anthranilate synthase component I, N-terminal GO:0009058 KEGG: 00400+4.1.3.27|KEGG: 00405+4.1.3.27|MetaCyc: PWY-5958|MetaCyc: PWY-6660|MetaCyc: PWY-6661 CDA09_22905 8d4d2e71298e7984ec0977e5f45d02d4 113 Gene3D G3DSA:3.30.2320.50 2 109 3.0E-26 T 01-11-2018 CDA09_22905 8d4d2e71298e7984ec0977e5f45d02d4 113 Hamap MF_00213 Hydrogenase maturation factor HypA [hypA]. 1 113 19.654 T 01-11-2018 IPR000688 Hydrogenase maturation factor HypA/HybF GO:0016151|GO:0051604 CDA09_22905 8d4d2e71298e7984ec0977e5f45d02d4 113 ProSitePatterns PS01249 Hydrogenases expression/synthesis hypA family signature. 34 76 - T 01-11-2018 IPR020538 Hydrogenase nickel incorporation protein HypA/HybF, conserved site CDA09_22905 8d4d2e71298e7984ec0977e5f45d02d4 113 Gene3D G3DSA:2.20.28.10 69 102 3.0E-26 T 01-11-2018 CDA09_22905 8d4d2e71298e7984ec0977e5f45d02d4 113 PIRSF PIRSF004761 1 113 7.3E-32 T 01-11-2018 IPR000688 Hydrogenase maturation factor HypA/HybF GO:0016151|GO:0051604 CDA09_22905 8d4d2e71298e7984ec0977e5f45d02d4 113 Pfam PF01155 Hydrogenase/urease nickel incorporation, metallochaperone, hypA 2 112 1.7E-27 T 01-11-2018 IPR000688 Hydrogenase maturation factor HypA/HybF GO:0016151|GO:0051604 CDA09_07940 16242b2610c0d50df1309dfd7c4b87e0 506 Gene3D G3DSA:3.40.605.10 23 492 4.5E-163 T 01-11-2018 IPR016162 Aldehyde dehydrogenase, N-terminal GO:0016491|GO:0055114 CDA09_07940 16242b2610c0d50df1309dfd7c4b87e0 506 ProSitePatterns PS00070 Aldehyde dehydrogenases cysteine active site. 294 305 - T 01-11-2018 IPR016160 Aldehyde dehydrogenase, cysteine active site GO:0016491|GO:0055114 CDA09_07940 16242b2610c0d50df1309dfd7c4b87e0 506 ProSitePatterns PS00687 Aldehyde dehydrogenases glutamic acid active site. 261 268 - T 01-11-2018 IPR029510 Aldehyde dehydrogenase, glutamic acid active site GO:0016491|GO:0055114 CDA09_07940 16242b2610c0d50df1309dfd7c4b87e0 506 Pfam PF00171 Aldehyde dehydrogenase family 27 493 5.9E-164 T 01-11-2018 IPR015590 Aldehyde dehydrogenase domain GO:0016491|GO:0055114 CDA09_07940 16242b2610c0d50df1309dfd7c4b87e0 506 SUPERFAMILY SSF53720 13 498 2.62E-160 T 01-11-2018 IPR016161 Aldehyde/histidinol dehydrogenase GO:0016491|GO:0055114 CDA09_07940 16242b2610c0d50df1309dfd7c4b87e0 506 Gene3D G3DSA:3.40.309.10 266 464 4.5E-163 T 01-11-2018 IPR016163 Aldehyde dehydrogenase, C-terminal GO:0016491|GO:0016620|GO:0055114 CDA09_14490 c95860bbb23bb61f4d411a16fb5187a4 173 SUPERFAMILY SSF53335 5 139 2.67E-25 T 01-11-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase CDA09_14490 c95860bbb23bb61f4d411a16fb5187a4 173 Gene3D G3DSA:3.40.50.150 3 150 1.1E-23 T 01-11-2018 CDA09_14490 c95860bbb23bb61f4d411a16fb5187a4 173 Pfam PF13649 Methyltransferase domain 10 77 3.6E-9 T 01-11-2018 CDA09_08480 026c4999cc0f33952eb34759cbbc711a 398 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 155 170 3.0E-14 T 01-11-2018 CDA09_08480 026c4999cc0f33952eb34759cbbc711a 398 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 7 29 3.0E-14 T 01-11-2018 CDA09_08480 026c4999cc0f33952eb34759cbbc711a 398 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 301 317 3.0E-14 T 01-11-2018 CDA09_08480 026c4999cc0f33952eb34759cbbc711a 398 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 286 301 3.0E-14 T 01-11-2018 CDA09_08480 026c4999cc0f33952eb34759cbbc711a 398 Gene3D G3DSA:3.50.50.60 8 351 5.9E-112 T 01-11-2018 IPR036188 FAD/NAD(P)-binding domain superfamily CDA09_08480 026c4999cc0f33952eb34759cbbc711a 398 Gene3D G3DSA:3.30.9.30 40 359 5.9E-112 T 01-11-2018 CDA09_08480 026c4999cc0f33952eb34759cbbc711a 398 SUPERFAMILY SSF51905 6 362 8.19E-62 T 01-11-2018 IPR036188 FAD/NAD(P)-binding domain superfamily CDA09_08480 026c4999cc0f33952eb34759cbbc711a 398 Pfam PF01494 FAD binding domain 6 347 1.4E-27 T 01-11-2018 IPR002938 FAD-binding domain GO:0071949 CDA09_08480 026c4999cc0f33952eb34759cbbc711a 398 SUPERFAMILY SSF54373 180 279 3.14E-14 T 01-11-2018 CDA09_09445 3ec89ef190941b81d22ec6cac8c8de68 316 Gene3D G3DSA:3.40.50.10680 10 287 5.3E-105 T 01-11-2018 CDA09_09445 3ec89ef190941b81d22ec6cac8c8de68 316 Gene3D G3DSA:1.10.8.240 40 127 5.3E-105 T 01-11-2018 CDA09_09445 3ec89ef190941b81d22ec6cac8c8de68 316 Hamap MF_01257 2-phospho-L-lactate transferase [cofD]. 1 316 112.239 T 01-11-2018 IPR010115 2-phospho-L-lactate transferase GO:0000287|GO:0016780|GO:0051188 KEGG: 00680+2.7.8.28|MetaCyc: PWY-5198 CDA09_09445 3ec89ef190941b81d22ec6cac8c8de68 316 TIGRFAM TIGR01819 F420_cofD: 2-phospho-L-lactate transferase 7 307 4.7E-91 T 01-11-2018 IPR010115 2-phospho-L-lactate transferase GO:0000287|GO:0016780|GO:0051188 KEGG: 00680+2.7.8.28|MetaCyc: PWY-5198 CDA09_09445 3ec89ef190941b81d22ec6cac8c8de68 316 SUPERFAMILY SSF142338 6 310 1.05E-81 T 01-11-2018 CDA09_09445 3ec89ef190941b81d22ec6cac8c8de68 316 Pfam PF01933 Uncharacterised protein family UPF0052 6 274 2.4E-45 T 01-11-2018 IPR002882 LPPG:FO 2-phospho-L-lactate transferase CofD/UPF0052 CDA09_05045 66bd4161796c1d38aa324fec1ffe3f43 327 Gene3D G3DSA:3.40.718.10 7 326 3.5E-119 T 01-11-2018 CDA09_05045 66bd4161796c1d38aa324fec1ffe3f43 327 SUPERFAMILY SSF53659 9 325 2.7E-106 T 01-11-2018 CDA09_05045 66bd4161796c1d38aa324fec1ffe3f43 327 TIGRFAM TIGR00557 pdxA: 4-hydroxythreonine-4-phosphate dehydrogenase PdxA 11 323 7.5E-125 T 01-11-2018 IPR005255 PdxA family GO:0051287|GO:0055114 KEGG: 00750+1.1.1.262 CDA09_05045 66bd4161796c1d38aa324fec1ffe3f43 327 Pfam PF04166 Pyridoxal phosphate biosynthetic protein PdxA 37 319 1.9E-108 T 01-11-2018 IPR005255 PdxA family GO:0051287|GO:0055114 KEGG: 00750+1.1.1.262 CDA09_05045 66bd4161796c1d38aa324fec1ffe3f43 327 Hamap MF_00536 4-hydroxythreonine-4-phosphate dehydrogenase [pdxA]. 8 326 36.291 T 01-11-2018 IPR037510 4-hydroxythreonine-4-phosphate dehydrogenase GO:0042823|GO:0050570 KEGG: 00750+1.1.1.262 CDA09_08465 232908479e61f69ec0aede05343163a8 308 SUPERFAMILY SSF46785 3 83 7.82E-20 T 01-11-2018 IPR036390 Winged helix DNA-binding domain superfamily CDA09_08465 232908479e61f69ec0aede05343163a8 308 SUPERFAMILY SSF53850 88 294 1.41E-45 T 01-11-2018 CDA09_08465 232908479e61f69ec0aede05343163a8 308 Pfam PF03466 LysR substrate binding domain 94 294 2.0E-23 T 01-11-2018 IPR005119 LysR, substrate-binding CDA09_08465 232908479e61f69ec0aede05343163a8 308 Gene3D G3DSA:3.40.190.10 168 266 1.3E-70 T 01-11-2018 CDA09_08465 232908479e61f69ec0aede05343163a8 308 Gene3D G3DSA:1.10.10.10 1 86 2.8E-29 T 01-11-2018 IPR036388 Winged helix-like DNA-binding domain superfamily CDA09_08465 232908479e61f69ec0aede05343163a8 308 Gene3D G3DSA:3.40.190.10 88 291 1.3E-70 T 01-11-2018 CDA09_08465 232908479e61f69ec0aede05343163a8 308 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 32 42 3.2E-5 T 01-11-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 CDA09_08465 232908479e61f69ec0aede05343163a8 308 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 21 32 3.2E-5 T 01-11-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 CDA09_08465 232908479e61f69ec0aede05343163a8 308 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 42 53 3.2E-5 T 01-11-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 CDA09_08465 232908479e61f69ec0aede05343163a8 308 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 6 63 5.0E-18 T 01-11-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 CDA09_09380 907cb58d416862ea78ba27fd98c560fb 261 Pfam PF00378 Enoyl-CoA hydratase/isomerase 15 260 2.2E-75 T 01-11-2018 IPR001753 Enoyl-CoA hydratase/isomerase GO:0003824 CDA09_09380 907cb58d416862ea78ba27fd98c560fb 261 SUPERFAMILY SSF52096 9 261 9.52E-86 T 01-11-2018 IPR029045 ClpP/crotonase-like domain superfamily CDA09_09380 907cb58d416862ea78ba27fd98c560fb 261 Gene3D G3DSA:3.90.226.10 4 203 8.4E-68 T 01-11-2018 CDA09_09380 907cb58d416862ea78ba27fd98c560fb 261 Gene3D G3DSA:1.10.12.10 204 260 1.0E-22 T 01-11-2018 IPR014748 Enoyl-CoA hydratase, C-terminal CDA09_11155 61d9541eef2e66533917286264aada58 312 SUPERFAMILY SSF46785 8 87 3.45E-21 T 01-11-2018 IPR036390 Winged helix DNA-binding domain superfamily CDA09_11155 61d9541eef2e66533917286264aada58 312 Gene3D G3DSA:1.10.10.10 10 98 4.4E-22 T 01-11-2018 IPR036388 Winged helix-like DNA-binding domain superfamily CDA09_11155 61d9541eef2e66533917286264aada58 312 Gene3D G3DSA:3.40.190.10 165 272 1.2E-40 T 01-11-2018 CDA09_11155 61d9541eef2e66533917286264aada58 312 SUPERFAMILY SSF53850 99 307 5.79E-32 T 01-11-2018 CDA09_11155 61d9541eef2e66533917286264aada58 312 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 47 58 5.0E-7 T 01-11-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 CDA09_11155 61d9541eef2e66533917286264aada58 312 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 26 37 5.0E-7 T 01-11-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 CDA09_11155 61d9541eef2e66533917286264aada58 312 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 37 47 5.0E-7 T 01-11-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 CDA09_11155 61d9541eef2e66533917286264aada58 312 Gene3D G3DSA:3.40.190.10 106 300 1.2E-40 T 01-11-2018 CDA09_11155 61d9541eef2e66533917286264aada58 312 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 11 69 3.5E-20 T 01-11-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 CDA09_11155 61d9541eef2e66533917286264aada58 312 Pfam PF03466 LysR substrate binding domain 97 303 2.6E-30 T 01-11-2018 IPR005119 LysR, substrate-binding CDA09_21310 d65c71004b04df4b51cfbc8270c9afa2 288 TIGRFAM TIGR00255 TIGR00255: TIGR00255 family protein 1 288 2.6E-84 T 01-11-2018 IPR005229 Conserved hypothetical protein CHP00255 CDA09_21310 d65c71004b04df4b51cfbc8270c9afa2 288 Pfam PF03755 YicC-like family, N-terminal region 2 154 2.4E-41 T 01-11-2018 IPR013527 YicC-like, N-terminal CDA09_21310 d65c71004b04df4b51cfbc8270c9afa2 288 Pfam PF08340 Domain of unknown function (DUF1732) 204 288 1.7E-35 T 01-11-2018 IPR013551 Domain of unknown function DUF1732 CDA09_09785 33431981a7d4907f1a4866c697e302f1 354 Gene3D G3DSA:3.20.20.70 1 354 6.6E-122 T 01-11-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 CDA09_09785 33431981a7d4907f1a4866c697e302f1 354 Pfam PF00724 NADH:flavin oxidoreductase / NADH oxidase family 3 330 1.7E-73 T 01-11-2018 IPR001155 NADH:flavin oxidoreductase/NADH oxidase, N-terminal GO:0010181|GO:0016491|GO:0055114 CDA09_09785 33431981a7d4907f1a4866c697e302f1 354 SUPERFAMILY SSF51395 1 352 4.58E-109 T 01-11-2018 CDA09_17805 29b86ae5227f4cfd3deb45e6e62a5eb7 187 Gene3D G3DSA:2.60.370.10 54 185 1.4E-46 T 01-11-2018 IPR023471 Cytochrome c oxidase assembly protein CtaG/Cox11, domain superfamily Reactome: R-HSA-5628897|Reactome: R-HSA-611105 CDA09_17805 29b86ae5227f4cfd3deb45e6e62a5eb7 187 PIRSF PIRSF005413 1 186 2.3E-65 T 01-11-2018 IPR007533 Cytochrome c oxidase assembly protein CtaG/Cox11 GO:0005507 Reactome: R-HSA-5628897|Reactome: R-HSA-611105 CDA09_17805 29b86ae5227f4cfd3deb45e6e62a5eb7 187 SUPERFAMILY SSF110111 55 174 3.79E-46 T 01-11-2018 IPR023471 Cytochrome c oxidase assembly protein CtaG/Cox11, domain superfamily Reactome: R-HSA-5628897|Reactome: R-HSA-611105 CDA09_17805 29b86ae5227f4cfd3deb45e6e62a5eb7 187 Pfam PF04442 Cytochrome c oxidase assembly protein CtaG/Cox11 32 172 2.9E-50 T 01-11-2018 IPR007533 Cytochrome c oxidase assembly protein CtaG/Cox11 GO:0005507 Reactome: R-HSA-5628897|Reactome: R-HSA-611105 CDA09_04285 2f15cba85131a3f7aa0292cdd1166451 213 SUPERFAMILY SSF53850 4 208 9.99E-65 T 01-11-2018 CDA09_04285 2f15cba85131a3f7aa0292cdd1166451 213 Pfam PF01634 ATP phosphoribosyltransferase 53 207 1.2E-49 T 01-11-2018 IPR013820 ATP phosphoribosyltransferase, catalytic domain GO:0000105|GO:0003879|GO:0005737 KEGG: 00340+2.4.2.17 CDA09_04285 2f15cba85131a3f7aa0292cdd1166451 213 Gene3D G3DSA:3.40.190.10 5 201 6.6E-71 T 01-11-2018 CDA09_04285 2f15cba85131a3f7aa0292cdd1166451 213 TIGRFAM TIGR00070 hisG: ATP phosphoribosyltransferase 4 189 1.0E-58 T 01-11-2018 IPR013820 ATP phosphoribosyltransferase, catalytic domain GO:0000105|GO:0003879|GO:0005737 KEGG: 00340+2.4.2.17 CDA09_04285 2f15cba85131a3f7aa0292cdd1166451 213 Gene3D G3DSA:3.40.190.10 95 181 6.6E-71 T 01-11-2018 CDA09_04285 2f15cba85131a3f7aa0292cdd1166451 213 ProSitePatterns PS01316 ATP phosphoribosyltransferase signature. 148 169 - T 01-11-2018 IPR018198 ATP phosphoribosyltransferase, conserved site GO:0003879 KEGG: 00340+2.4.2.17 CDA09_04285 2f15cba85131a3f7aa0292cdd1166451 213 Hamap MF_01018 ATP phosphoribosyltransferase [hisG]. 3 213 55.25 T 01-11-2018 IPR024893 ATP phosphoribosyltransferase HisG, short form GO:0000105|GO:0003879 KEGG: 00340+2.4.2.17 CDA09_09285 9b8a5d7340eb36c21bda9352f9bcaace 705 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 598 699 8.5E-7 T 01-11-2018 IPR003594 Histidine kinase/HSP90-like ATPase CDA09_09285 9b8a5d7340eb36c21bda9352f9bcaace 705 Gene3D G3DSA:3.30.565.10 531 697 5.8E-15 T 01-11-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily CDA09_09285 9b8a5d7340eb36c21bda9352f9bcaace 705 SUPERFAMILY SSF55874 565 699 6.45E-16 T 01-11-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily CDA09_09285 9b8a5d7340eb36c21bda9352f9bcaace 705 SMART SM00387 597 703 5.5E-12 T 01-11-2018 IPR003594 Histidine kinase/HSP90-like ATPase CDA09_08600 9b8c4990ccc231546d33df039dcd5aaf 698 Pfam PF05378 Hydantoinase/oxoprolinase N-terminal region 3 189 5.2E-47 T 01-11-2018 IPR008040 Hydantoinaseoxoprolinase, N-terminal Reactome: R-HSA-174403|Reactome: R-HSA-5578998 CDA09_08600 9b8c4990ccc231546d33df039dcd5aaf 698 SUPERFAMILY SSF53067 2 351 1.0E-5 T 01-11-2018 CDA09_08600 9b8c4990ccc231546d33df039dcd5aaf 698 Pfam PF01968 Hydantoinase/oxoprolinase 210 498 9.3E-91 T 01-11-2018 IPR002821 Hydantoinase A/oxoprolinase GO:0016787 Reactome: R-HSA-174403|Reactome: R-HSA-5578998 CDA09_08375 462a89c15bfac69e16ed678879187333 290 Gene3D G3DSA:3.40.50.300 2 277 2.5E-67 T 01-11-2018 CDA09_08375 462a89c15bfac69e16ed678879187333 290 Pfam PF00142 4Fe-4S iron sulfur cluster binding proteins, NifH/frxC family 4 275 5.0E-134 T 01-11-2018 IPR000392 NifH/frxC family GO:0005524|GO:0016491|GO:0055114 CDA09_08375 462a89c15bfac69e16ed678879187333 290 PRINTS PR00091 Nitrogenase component II signature 9 22 8.9E-38 T 01-11-2018 CDA09_08375 462a89c15bfac69e16ed678879187333 290 PRINTS PR00091 Nitrogenase component II signature 86 100 8.9E-38 T 01-11-2018 CDA09_08375 462a89c15bfac69e16ed678879187333 290 PRINTS PR00091 Nitrogenase component II signature 31 46 8.9E-38 T 01-11-2018 CDA09_08375 462a89c15bfac69e16ed678879187333 290 PRINTS PR00091 Nitrogenase component II signature 124 139 8.9E-38 T 01-11-2018 CDA09_08375 462a89c15bfac69e16ed678879187333 290 SUPERFAMILY SSF52540 4 279 1.47E-59 T 01-11-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CDA09_08375 462a89c15bfac69e16ed678879187333 290 Hamap MF_00533 Nitrogenase iron protein [nifH]. 3 276 52.285 T 01-11-2018 IPR005977 Nitrogenase iron protein NifH GO:0009399|GO:0016163|GO:0016612|GO:0055114 KEGG: 00625+1.18.6.1|KEGG: 00910+1.18.6.1 CDA09_08375 462a89c15bfac69e16ed678879187333 290 PIRSF PIRSF000363 2 278 1.9E-119 T 01-11-2018 IPR000392 NifH/frxC family GO:0005524|GO:0016491|GO:0055114 CDA09_08375 462a89c15bfac69e16ed678879187333 290 ProSitePatterns PS00692 NifH/frxC family signature 2. 125 138 - T 01-11-2018 IPR030655 NifH/chlL conserved site CDA09_08375 462a89c15bfac69e16ed678879187333 290 TIGRFAM TIGR01287 nifH: nitrogenase iron protein 4 278 1.9E-139 T 01-11-2018 IPR005977 Nitrogenase iron protein NifH GO:0009399|GO:0016163|GO:0016612|GO:0055114 KEGG: 00625+1.18.6.1|KEGG: 00910+1.18.6.1 CDA09_08375 462a89c15bfac69e16ed678879187333 290 ProSitePatterns PS00746 NifH/frxC family signature 1. 88 100 - T 01-11-2018 IPR030655 NifH/chlL conserved site CDA09_23095 2c95d4d333e049794430391269e6f14f 130 Gene3D G3DSA:1.10.3730.20 7 126 1.4E-7 T 01-11-2018 CDA09_23095 2c95d4d333e049794430391269e6f14f 130 Pfam PF00892 EamA-like transporter family 23 118 4.1E-9 T 01-11-2018 IPR000620 EamA domain GO:0016020|GO:0016021 CDA09_23095 2c95d4d333e049794430391269e6f14f 130 SUPERFAMILY SSF103481 24 123 2.48E-14 T 01-11-2018 CDA09_14635 500a997878866efe0787af517de99a88 182 ProSitePatterns PS00893 Nudix box signature. 70 91 - T 01-11-2018 IPR020084 NUDIX hydrolase, conserved site GO:0016787 CDA09_14635 500a997878866efe0787af517de99a88 182 Gene3D G3DSA:3.90.79.10 36 168 1.7E-29 T 01-11-2018 CDA09_14635 500a997878866efe0787af517de99a88 182 SUPERFAMILY SSF55811 4 158 1.03E-33 T 01-11-2018 IPR015797 NUDIX hydrolase-like domain superfamily GO:0016787 CDA09_14635 500a997878866efe0787af517de99a88 182 PRINTS PR00502 NUDIX hydrolase family signature 65 79 8.6E-8 T 01-11-2018 IPR020476 NUDIX hydrolase Reactome: R-HSA-2393930 CDA09_14635 500a997878866efe0787af517de99a88 182 PRINTS PR00502 NUDIX hydrolase family signature 79 94 8.6E-8 T 01-11-2018 IPR020476 NUDIX hydrolase Reactome: R-HSA-2393930 CDA09_14635 500a997878866efe0787af517de99a88 182 Pfam PF00293 NUDIX domain 39 147 7.5E-14 T 01-11-2018 IPR000086 NUDIX hydrolase domain GO:0016787 CDA09_22445 b10ebfd21e2ed4f4aa7ed9c6f23c2119 273 Pfam PF03239 Iron permease FTR1 family 1 263 1.7E-26 T 01-11-2018 IPR004923 Iron permease FTR1/Fip1/EfeU GO:0005381|GO:0016020|GO:0033573|GO:0034755 CDA09_21165 301050f0368aa0d8851af92c1f658f65 278 Gene3D G3DSA:3.40.50.1820 7 275 5.5E-55 T 01-11-2018 IPR029058 Alpha/Beta hydrolase fold CDA09_21165 301050f0368aa0d8851af92c1f658f65 278 Pfam PF12697 Alpha/beta hydrolase family 23 260 2.0E-18 T 01-11-2018 IPR000073 Alpha/beta hydrolase fold-1 CDA09_21165 301050f0368aa0d8851af92c1f658f65 278 SUPERFAMILY SSF53474 4 275 2.05E-51 T 01-11-2018 IPR029058 Alpha/Beta hydrolase fold CDA09_02775 5f8e17e6ad2cdcaadb2d713c37080a05 231 SUPERFAMILY SSF52540 4 222 1.48E-67 T 01-11-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CDA09_02775 5f8e17e6ad2cdcaadb2d713c37080a05 231 ProSitePatterns PS00211 ABC transporters family signature. 144 158 - T 01-11-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 CDA09_02775 5f8e17e6ad2cdcaadb2d713c37080a05 231 Pfam PF00005 ABC transporter 23 171 2.0E-33 T 01-11-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 CDA09_02775 5f8e17e6ad2cdcaadb2d713c37080a05 231 Gene3D G3DSA:3.40.50.300 3 227 3.6E-63 T 01-11-2018 CDA09_02775 5f8e17e6ad2cdcaadb2d713c37080a05 231 SMART SM00382 32 219 3.5E-13 T 01-11-2018 IPR003593 AAA+ ATPase domain CDA09_12155 ce18ee8e6208a65a927d968db1dafc4d 434 Gene3D G3DSA:3.40.50.11900 312 433 2.1E-8 T 01-11-2018 CDA09_12155 ce18ee8e6208a65a927d968db1dafc4d 434 TIGRFAM TIGR03191 benz_CoA_bzdO: benzoyl-CoA reductase, bzd-type, O subunit 5 434 2.8E-288 T 01-11-2018 IPR017604 Benzoyl-CoA reductase, bzd-type, O subunit CDA09_12155 ce18ee8e6208a65a927d968db1dafc4d 434 Pfam PF06050 2-hydroxyglutaryl-CoA dehydratase, D-component 70 427 3.1E-39 T 01-11-2018 IPR010327 FldB/FldC dehydratase alpha/beta subunit CDA09_02830 18c5bb20fbc670059814a724d7c73d3c 149 Gene3D G3DSA:3.10.430.100 61 148 4.7E-27 T 01-11-2018 IPR036791 Ribosomal protein L9, C-terminal domain superfamily CDA09_02830 18c5bb20fbc670059814a724d7c73d3c 149 TIGRFAM TIGR00158 L9: ribosomal protein bL9 1 146 8.2E-46 T 01-11-2018 IPR020594 Ribosomal protein L9, bacteria/chloroplast GO:0003735|GO:0005622|GO:0005840|GO:0006412 CDA09_02830 18c5bb20fbc670059814a724d7c73d3c 149 Hamap MF_00503 50S ribosomal protein L9 [rplI]. 1 148 26.779 T 01-11-2018 IPR020594 Ribosomal protein L9, bacteria/chloroplast GO:0003735|GO:0005622|GO:0005840|GO:0006412 CDA09_02830 18c5bb20fbc670059814a724d7c73d3c 149 Pfam PF01281 Ribosomal protein L9, N-terminal domain 1 47 9.5E-24 T 01-11-2018 IPR020070 Ribosomal protein L9, N-terminal Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 CDA09_02830 18c5bb20fbc670059814a724d7c73d3c 149 Gene3D G3DSA:3.40.5.10 1 50 3.7E-24 T 01-11-2018 IPR036935 Ribosomal protein L9, N-terminal domain superfamily Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 CDA09_02830 18c5bb20fbc670059814a724d7c73d3c 149 SUPERFAMILY SSF55653 60 147 3.53E-26 T 01-11-2018 IPR036791 Ribosomal protein L9, C-terminal domain superfamily CDA09_02830 18c5bb20fbc670059814a724d7c73d3c 149 SUPERFAMILY SSF55658 1 56 2.09E-19 T 01-11-2018 IPR009027 Ribosomal protein L9/RNase H1, N-terminal CDA09_02830 18c5bb20fbc670059814a724d7c73d3c 149 ProSitePatterns PS00651 Ribosomal protein L9 signature. 13 40 - T 01-11-2018 IPR020070 Ribosomal protein L9, N-terminal Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 CDA09_02830 18c5bb20fbc670059814a724d7c73d3c 149 Pfam PF03948 Ribosomal protein L9, C-terminal domain 64 145 5.2E-26 T 01-11-2018 IPR020069 Ribosomal protein L9, C-terminal CDA09_07235 22c3088c7e4f86d76d9554d8c057484b 726 PIRSF PIRSF036354 5 720 1.1E-174 T 01-11-2018 IPR011399 Nitrous oxide reductase expression regulator NosR GO:0003677|GO:0016020|GO:0045893 CDA09_07235 22c3088c7e4f86d76d9554d8c057484b 726 Pfam PF12801 4Fe-4S binding domain 490 533 9.1E-14 T 01-11-2018 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain CDA09_07235 22c3088c7e4f86d76d9554d8c057484b 726 Pfam PF12801 4Fe-4S binding domain 598 625 1.4E-4 T 01-11-2018 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain CDA09_07235 22c3088c7e4f86d76d9554d8c057484b 726 SMART SM00900 95 189 3.9E-7 T 01-11-2018 IPR007329 FMN-binding GO:0010181|GO:0016020 CDA09_07235 22c3088c7e4f86d76d9554d8c057484b 726 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 642 653 - T 01-11-2018 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site CDA09_07235 22c3088c7e4f86d76d9554d8c057484b 726 SUPERFAMILY SSF54862 502 674 2.0E-9 T 01-11-2018 CDA09_15170 06977dd08dcba05ecabd2606661acd5c 1166 Pfam PF00270 DEAD/DEAH box helicase 297 456 6.5E-19 T 01-11-2018 IPR011545 DEAD/DEAH box helicase domain GO:0003676|GO:0005524 CDA09_15170 06977dd08dcba05ecabd2606661acd5c 1166 SUPERFAMILY SSF52540 287 468 2.8E-30 T 01-11-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CDA09_15170 06977dd08dcba05ecabd2606661acd5c 1166 Gene3D G3DSA:3.40.50.300 278 483 3.7E-42 T 01-11-2018 CDA09_15170 06977dd08dcba05ecabd2606661acd5c 1166 SUPERFAMILY SSF52540 308 702 3.68E-17 T 01-11-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CDA09_15170 06977dd08dcba05ecabd2606661acd5c 1166 Gene3D G3DSA:3.40.50.300 515 703 9.0E-22 T 01-11-2018 CDA09_15170 06977dd08dcba05ecabd2606661acd5c 1166 SMART SM00487 288 485 9.5E-25 T 01-11-2018 IPR014001 Helicase superfamily 1/2, ATP-binding domain CDA09_11050 e6f1c949f13c9a30587b2b8466ee35b2 320 SUPERFAMILY SSF161098 94 277 6.93E-41 T 01-11-2018 IPR035906 MetI-like superfamily CDA09_11050 e6f1c949f13c9a30587b2b8466ee35b2 320 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 116 276 3.6E-25 T 01-11-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 CDA09_11050 e6f1c949f13c9a30587b2b8466ee35b2 320 Gene3D G3DSA:1.10.3720.10 91 281 3.0E-35 T 01-11-2018 IPR035906 MetI-like superfamily CDA09_02045 7ab9346c87691dbca11b6da9a67489d6 794 SUPERFAMILY SSF48208 246 567 1.81E-51 T 01-11-2018 IPR008928 Six-hairpin glycosidase superfamily GO:0003824 CDA09_02045 7ab9346c87691dbca11b6da9a67489d6 794 SUPERFAMILY SSF52833 41 169 3.14E-28 T 01-11-2018 IPR036249 Thioredoxin-like superfamily CDA09_02045 7ab9346c87691dbca11b6da9a67489d6 794 Gene3D G3DSA:3.40.30.10 42 214 2.6E-64 T 01-11-2018 CDA09_02045 7ab9346c87691dbca11b6da9a67489d6 794 PIRSF PIRSF006402 32 672 1.4E-195 T 01-11-2018 IPR024705 Spermatogenesis-associated protein 20 CDA09_02045 7ab9346c87691dbca11b6da9a67489d6 794 Pfam PF11412 Disulphide bond corrector protein DsbC 686 786 1.1E-5 T 01-11-2018 IPR028250 Thiol:disulfide interchange protein DsbD, N-terminal domain CDA09_02045 7ab9346c87691dbca11b6da9a67489d6 794 Pfam PF03190 Protein of unknown function, DUF255 43 205 3.0E-65 T 01-11-2018 IPR004879 Domain of unknown function DUF255 CDA09_09530 53f4fb5ddf7ceaa817ad8c682bfad6ca 239 ProSitePatterns PS01081 TetR-type HTH domain signature. 47 78 - T 01-11-2018 IPR023772 DNA-binding HTH domain, TetR-type, conserved site CDA09_09530 53f4fb5ddf7ceaa817ad8c682bfad6ca 239 Gene3D G3DSA:1.10.357.10 31 221 9.0E-29 T 01-11-2018 CDA09_09530 53f4fb5ddf7ceaa817ad8c682bfad6ca 239 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 35 48 1.7E-9 T 01-11-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 CDA09_09530 53f4fb5ddf7ceaa817ad8c682bfad6ca 239 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 56 79 1.7E-9 T 01-11-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 CDA09_09530 53f4fb5ddf7ceaa817ad8c682bfad6ca 239 SUPERFAMILY SSF46689 24 91 1.85E-17 T 01-11-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 CDA09_09530 53f4fb5ddf7ceaa817ad8c682bfad6ca 239 Pfam PF00440 Bacterial regulatory proteins, tetR family 35 81 2.1E-16 T 01-11-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 CDA09_13875 4231b260d8b4e0b10331742752041625 743 Pfam PF02515 CoA-transferase family III 381 717 3.4E-81 T 01-11-2018 IPR003673 CoA-transferase family III GO:0003824 CDA09_13875 4231b260d8b4e0b10331742752041625 743 Pfam PF02515 CoA-transferase family III 6 338 7.7E-55 T 01-11-2018 IPR003673 CoA-transferase family III GO:0003824 CDA09_13875 4231b260d8b4e0b10331742752041625 743 Gene3D G3DSA:3.40.50.10540 670 734 9.7E-8 T 01-11-2018 IPR023606 CoA-transferase family III domain superfamily CDA09_13875 4231b260d8b4e0b10331742752041625 743 Gene3D G3DSA:3.40.50.10540 6 322 7.9E-60 T 01-11-2018 IPR023606 CoA-transferase family III domain superfamily CDA09_13875 4231b260d8b4e0b10331742752041625 743 Gene3D G3DSA:3.40.50.10540 380 592 2.3E-72 T 01-11-2018 IPR023606 CoA-transferase family III domain superfamily CDA09_13875 4231b260d8b4e0b10331742752041625 743 SUPERFAMILY SSF89796 4 346 5.1E-68 T 01-11-2018 IPR023606 CoA-transferase family III domain superfamily CDA09_13875 4231b260d8b4e0b10331742752041625 743 SUPERFAMILY SSF89796 378 740 7.59E-89 T 01-11-2018 IPR023606 CoA-transferase family III domain superfamily CDA09_13875 4231b260d8b4e0b10331742752041625 743 Gene3D G3DSA:3.30.1540.10 635 669 9.7E-8 T 01-11-2018 CDA09_13875 4231b260d8b4e0b10331742752041625 743 Gene3D G3DSA:3.30.1540.10 593 633 2.3E-72 T 01-11-2018 CDA09_13875 4231b260d8b4e0b10331742752041625 743 Gene3D G3DSA:3.30.1540.10 214 304 7.9E-60 T 01-11-2018 CDA09_12335 a2a0e0c61c3bb2a25d21a79155b5102b 270 SUPERFAMILY SSF53335 38 168 4.28E-15 T 01-11-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase CDA09_12335 a2a0e0c61c3bb2a25d21a79155b5102b 270 Gene3D G3DSA:3.40.50.150 35 185 5.9E-7 T 01-11-2018 CDA09_12335 a2a0e0c61c3bb2a25d21a79155b5102b 270 Pfam PF13679 Methyltransferase domain 31 171 5.1E-44 T 01-11-2018 IPR025714 Methyltransferase domain CDA09_07930 96687cd8dd9cf0d503e02d469ac479be 301 SUPERFAMILY SSF103481 40 145 8.89E-8 T 01-11-2018 CDA09_07930 96687cd8dd9cf0d503e02d469ac479be 301 SUPERFAMILY SSF103481 210 287 4.45E-10 T 01-11-2018 CDA09_07930 96687cd8dd9cf0d503e02d469ac479be 301 Pfam PF00892 EamA-like transporter family 151 283 2.0E-16 T 01-11-2018 IPR000620 EamA domain GO:0016020|GO:0016021 CDA09_07930 96687cd8dd9cf0d503e02d469ac479be 301 Pfam PF00892 EamA-like transporter family 9 141 2.1E-19 T 01-11-2018 IPR000620 EamA domain GO:0016020|GO:0016021 CDA09_18280 102c164cca680cc72b2e79e52755b772 184 Gene3D G3DSA:3.40.30.10 31 184 7.4E-37 T 01-11-2018 CDA09_18280 102c164cca680cc72b2e79e52755b772 184 Pfam PF08534 Redoxin 43 169 4.0E-22 T 01-11-2018 IPR013740 Redoxin GO:0016491 Reactome: R-HSA-3299685|Reactome: R-HSA-5628897 CDA09_18280 102c164cca680cc72b2e79e52755b772 184 SUPERFAMILY SSF52833 42 182 2.7E-34 T 01-11-2018 IPR036249 Thioredoxin-like superfamily CDA09_18280 102c164cca680cc72b2e79e52755b772 184 ProSitePatterns PS00194 Thioredoxin family active site. 71 89 - T 01-11-2018 IPR017937 Thioredoxin, conserved site GO:0045454 CDA09_18815 8dca5bf6b324750090c86c41ae52717f 283 Gene3D G3DSA:3.30.1130.10 146 283 8.8E-55 T 01-11-2018 CDA09_18815 8dca5bf6b324750090c86c41ae52717f 283 Hamap MF_00817 NADPH-dependent 7-cyano-7-deazaguanine reductase [queF]. 1 283 143.801 T 01-11-2018 IPR016428 NADPH-dependent 7-cyano-7-deazaguanine reductase, QueF type 2 GO:0005737|GO:0008616|GO:0046857|GO:0055114 KEGG: 00790+1.7.1.13|MetaCyc: PWY-6700 CDA09_18815 8dca5bf6b324750090c86c41ae52717f 283 Gene3D G3DSA:3.30.1130.10 22 137 6.4E-40 T 01-11-2018 CDA09_18815 8dca5bf6b324750090c86c41ae52717f 283 Pfam PF14489 QueF-like protein 196 270 1.0E-23 T 01-11-2018 IPR029500 NADPH-dependent 7-cyano-7-deazaguanine reductase QueF GO:0008616|GO:0033739 KEGG: 00790+1.7.1.13|MetaCyc: PWY-6700 CDA09_18815 8dca5bf6b324750090c86c41ae52717f 283 TIGRFAM TIGR03138 QueF: queuine synthase 12 283 8.7E-118 T 01-11-2018 IPR016428 NADPH-dependent 7-cyano-7-deazaguanine reductase, QueF type 2 GO:0005737|GO:0008616|GO:0046857|GO:0055114 KEGG: 00790+1.7.1.13|MetaCyc: PWY-6700 CDA09_18815 8dca5bf6b324750090c86c41ae52717f 283 Pfam PF14819 Nitrile reductase, 7-cyano-7-deazaguanine-reductase N-term 22 132 2.3E-45 T 01-11-2018 IPR029139 NADPH-dependent 7-cyano-7-deazaguanine reductase, N-terminal KEGG: 00790+1.7.1.13|MetaCyc: PWY-6700 CDA09_18815 8dca5bf6b324750090c86c41ae52717f 283 PIRSF PIRSF004750 8 283 9.7E-116 T 01-11-2018 IPR016428 NADPH-dependent 7-cyano-7-deazaguanine reductase, QueF type 2 GO:0005737|GO:0008616|GO:0046857|GO:0055114 KEGG: 00790+1.7.1.13|MetaCyc: PWY-6700 CDA09_18815 8dca5bf6b324750090c86c41ae52717f 283 SUPERFAMILY SSF55620 186 269 1.48E-8 T 01-11-2018 CDA09_16945 30a05953620d36702d1d218bc60d30eb 234 Gene3D G3DSA:3.40.50.1240 8 208 5.2E-37 T 01-11-2018 IPR029033 Histidine phosphatase superfamily CDA09_16945 30a05953620d36702d1d218bc60d30eb 234 SUPERFAMILY SSF53254 11 197 2.49E-38 T 01-11-2018 IPR029033 Histidine phosphatase superfamily CDA09_16945 30a05953620d36702d1d218bc60d30eb 234 SMART SM00855 12 165 1.6E-12 T 01-11-2018 IPR013078 Histidine phosphatase superfamily, clade-1 CDA09_16945 30a05953620d36702d1d218bc60d30eb 234 Pfam PF00300 Histidine phosphatase superfamily (branch 1) 13 201 1.9E-40 T 01-11-2018 IPR013078 Histidine phosphatase superfamily, clade-1 CDA09_16945 30a05953620d36702d1d218bc60d30eb 234 PIRSF PIRSF000709 7 225 8.9E-11 T 01-11-2018 CDA09_02985 44417c469f187189ce8ff1b14f4ad49f 87 Hamap MF_00539 50S ribosomal protein L27 [rpmA]. 1 85 28.994 T 01-11-2018 IPR001684 Ribosomal protein L27 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 CDA09_02985 44417c469f187189ce8ff1b14f4ad49f 87 PRINTS PR00063 Ribosomal protein L27 signature 29 53 5.3E-38 T 01-11-2018 IPR001684 Ribosomal protein L27 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 CDA09_02985 44417c469f187189ce8ff1b14f4ad49f 87 PRINTS PR00063 Ribosomal protein L27 signature 54 78 5.3E-38 T 01-11-2018 IPR001684 Ribosomal protein L27 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 CDA09_02985 44417c469f187189ce8ff1b14f4ad49f 87 PRINTS PR00063 Ribosomal protein L27 signature 4 28 5.3E-38 T 01-11-2018 IPR001684 Ribosomal protein L27 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 CDA09_02985 44417c469f187189ce8ff1b14f4ad49f 87 SUPERFAMILY SSF110324 2 83 3.49E-36 T 01-11-2018 CDA09_02985 44417c469f187189ce8ff1b14f4ad49f 87 TIGRFAM TIGR00062 L27: ribosomal protein bL27 1 83 1.3E-40 T 01-11-2018 IPR001684 Ribosomal protein L27 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 CDA09_02985 44417c469f187189ce8ff1b14f4ad49f 87 Gene3D G3DSA:2.40.50.1030 6 85 4.0E-31 T 01-11-2018 CDA09_02985 44417c469f187189ce8ff1b14f4ad49f 87 ProSitePatterns PS00831 Ribosomal protein L27 signature. 34 48 - T 01-11-2018 IPR018261 Ribosomal protein L27, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 CDA09_02985 44417c469f187189ce8ff1b14f4ad49f 87 Pfam PF01016 Ribosomal L27 protein 2 81 4.9E-39 T 01-11-2018 IPR001684 Ribosomal protein L27 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 CDA09_02985 44417c469f187189ce8ff1b14f4ad49f 87 ProDom PD003114 RIBOSOMAL L27 50S RIBONUCLEOPROTEIN CHLOROPLAST MITOCHONDRIAL PEPTIDE 60S TRANSIT PRECURSOR 28 71 2.0E-19 T 01-11-2018 IPR001684 Ribosomal protein L27 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 CDA09_21550 2ae6fd40874f7d58742ecacd13cedef3 434 Gene3D G3DSA:1.20.1600.10 31 434 2.4E-75 T 01-11-2018 CDA09_21550 2ae6fd40874f7d58742ecacd13cedef3 434 SUPERFAMILY SSF56954 8 433 3.27E-74 T 01-11-2018 CDA09_21550 2ae6fd40874f7d58742ecacd13cedef3 434 Pfam PF02321 Outer membrane efflux protein 250 432 1.8E-26 T 01-11-2018 IPR003423 Outer membrane efflux protein GO:0015562|GO:0055085 CDA09_21550 2ae6fd40874f7d58742ecacd13cedef3 434 Pfam PF02321 Outer membrane efflux protein 35 229 7.3E-27 T 01-11-2018 IPR003423 Outer membrane efflux protein GO:0015562|GO:0055085 CDA09_13265 a005522df2860c4eac1948a1abafad0c 93 Gene3D G3DSA:3.40.50.2300 3 92 2.9E-6 T 01-11-2018 CDA09_13265 a005522df2860c4eac1948a1abafad0c 93 Pfam PF00072 Response regulator receiver domain 12 81 6.1E-6 T 01-11-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 CDA09_13265 a005522df2860c4eac1948a1abafad0c 93 SUPERFAMILY SSF52172 13 81 1.61E-6 T 01-11-2018 IPR011006 CheY-like superfamily CDA09_05240 b5df293af7d40d9b50617b0409acf9da 297 Gene3D G3DSA:3.40.50.150 28 233 9.3E-31 T 01-11-2018 CDA09_05240 b5df293af7d40d9b50617b0409acf9da 297 Pfam PF08241 Methyltransferase domain 54 159 6.7E-17 T 01-11-2018 IPR013216 Methyltransferase type 11 GO:0008168 CDA09_05240 b5df293af7d40d9b50617b0409acf9da 297 Hamap MF_00835 Malonyl-[acyl-carrier protein] O-methyltransferase [bioC]. 9 275 28.13 T 01-11-2018 IPR011814 Malonyl-[acyl-carrier protein] O-methyltransferase BioC GO:0009102|GO:0010340 KEGG: 00780+2.1.1.197|MetaCyc: PWY-6519 CDA09_05240 b5df293af7d40d9b50617b0409acf9da 297 SUPERFAMILY SSF53335 18 275 3.41E-33 T 01-11-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase CDA09_17580 f59f50c1a6dc77077283ca2a111d9955 870 SMART SM00434 11 499 5.7E-290 T 01-11-2018 IPR002205 DNA topoisomerase, type IIA, subunit A/C-terminal GO:0003677|GO:0003918|GO:0005524|GO:0006265 Reactome: R-HSA-4615885 CDA09_17580 f59f50c1a6dc77077283ca2a111d9955 870 Pfam PF00521 DNA gyrase/topoisomerase IV, subunit A 32 506 1.1E-153 T 01-11-2018 IPR002205 DNA topoisomerase, type IIA, subunit A/C-terminal GO:0003677|GO:0003918|GO:0005524|GO:0006265 Reactome: R-HSA-4615885 CDA09_17580 f59f50c1a6dc77077283ca2a111d9955 870 TIGRFAM TIGR01063 gyrA: DNA gyrase, A subunit 10 841 0.0 T 01-11-2018 CDA09_17580 f59f50c1a6dc77077283ca2a111d9955 870 Gene3D G3DSA:3.90.199.10 33 521 3.1E-226 T 01-11-2018 IPR013758 DNA topoisomerase, type IIA, subunit A/ C-terminal, alpha-beta GO:0003677|GO:0003918|GO:0005524|GO:0006259|GO:0006265 Reactome: R-HSA-4615885 CDA09_17580 f59f50c1a6dc77077283ca2a111d9955 870 Gene3D G3DSA:3.30.1360.40 236 333 3.1E-226 T 01-11-2018 CDA09_17580 f59f50c1a6dc77077283ca2a111d9955 870 Gene3D G3DSA:1.10.268.10 370 493 3.1E-226 T 01-11-2018 IPR013757 Type IIA DNA topoisomerase subunit A, alpha-helical domain superfamily GO:0003677|GO:0003918|GO:0005524 Reactome: R-HSA-4615885 CDA09_17580 f59f50c1a6dc77077283ca2a111d9955 870 Gene3D G3DSA:2.120.10.90 531 842 9.9E-129 T 01-11-2018 IPR035516 DNA gyrase/topoisomerase IV, subunit A, C-terminal CDA09_17580 f59f50c1a6dc77077283ca2a111d9955 870 SUPERFAMILY SSF101904 533 848 4.45E-114 T 01-11-2018 IPR035516 DNA gyrase/topoisomerase IV, subunit A, C-terminal CDA09_17580 f59f50c1a6dc77077283ca2a111d9955 870 Hamap MF_01897 DNA gyrase subunit A [gyrA]. 7 842 24.509 T 01-11-2018 IPR005743 DNA gyrase, subunit A GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 CDA09_17580 f59f50c1a6dc77077283ca2a111d9955 870 Pfam PF03989 DNA gyrase C-terminal domain, beta-propeller 745 787 2.7E-12 T 01-11-2018 IPR006691 DNA gyrase/topoisomerase IV, subunit A, C-terminal repeat GO:0003677|GO:0003916|GO:0005524|GO:0005694|GO:0006265 CDA09_17580 f59f50c1a6dc77077283ca2a111d9955 870 Pfam PF03989 DNA gyrase C-terminal domain, beta-propeller 794 840 4.3E-12 T 01-11-2018 IPR006691 DNA gyrase/topoisomerase IV, subunit A, C-terminal repeat GO:0003677|GO:0003916|GO:0005524|GO:0005694|GO:0006265 CDA09_17580 f59f50c1a6dc77077283ca2a111d9955 870 Pfam PF03989 DNA gyrase C-terminal domain, beta-propeller 693 738 8.4E-14 T 01-11-2018 IPR006691 DNA gyrase/topoisomerase IV, subunit A, C-terminal repeat GO:0003677|GO:0003916|GO:0005524|GO:0005694|GO:0006265 CDA09_17580 f59f50c1a6dc77077283ca2a111d9955 870 Pfam PF03989 DNA gyrase C-terminal domain, beta-propeller 646 688 1.3E-6 T 01-11-2018 IPR006691 DNA gyrase/topoisomerase IV, subunit A, C-terminal repeat GO:0003677|GO:0003916|GO:0005524|GO:0005694|GO:0006265 CDA09_17580 f59f50c1a6dc77077283ca2a111d9955 870 Pfam PF03989 DNA gyrase C-terminal domain, beta-propeller 538 585 1.7E-11 T 01-11-2018 IPR006691 DNA gyrase/topoisomerase IV, subunit A, C-terminal repeat GO:0003677|GO:0003916|GO:0005524|GO:0005694|GO:0006265 CDA09_17580 f59f50c1a6dc77077283ca2a111d9955 870 Pfam PF03989 DNA gyrase C-terminal domain, beta-propeller 588 637 2.4E-11 T 01-11-2018 IPR006691 DNA gyrase/topoisomerase IV, subunit A, C-terminal repeat GO:0003677|GO:0003916|GO:0005524|GO:0005694|GO:0006265 CDA09_17580 f59f50c1a6dc77077283ca2a111d9955 870 SUPERFAMILY SSF56719 30 522 2.35E-179 T 01-11-2018 IPR013760 DNA topoisomerase, type IIA-like domain superfamily GO:0003918|GO:0005524 Reactome: R-HSA-4615885 CDA09_04040 1a4842bf9d9e3afd2956403eaed99fa0 196 Hamap MF_00233 Outer-membrane lipoprotein LolB [lolB]. 8 194 20.007 T 01-11-2018 IPR004565 Outer membrane lipoprotein LolB GO:0009279|GO:0015031 CDA09_04040 1a4842bf9d9e3afd2956403eaed99fa0 196 SUPERFAMILY SSF89392 24 193 3.88E-36 T 01-11-2018 IPR029046 Lipoprotein localisation LolA/LolB/LppX CDA09_04040 1a4842bf9d9e3afd2956403eaed99fa0 196 Gene3D G3DSA:2.50.20.10 28 194 1.4E-32 T 01-11-2018 CDA09_04040 1a4842bf9d9e3afd2956403eaed99fa0 196 Pfam PF03550 Outer membrane lipoprotein LolB 43 192 1.7E-36 T 01-11-2018 IPR004565 Outer membrane lipoprotein LolB GO:0009279|GO:0015031 CDA09_11520 af5bdcd0ef0dfed461bd03642bb7efcf 558 PIRSF PIRSF006453 1 546 3.0E-232 T 01-11-2018 IPR012027 Formylmethanofuran dehydrogenase, subunit A CDA09_11520 af5bdcd0ef0dfed461bd03642bb7efcf 558 SUPERFAMILY SSF51338 1 64 3.6E-14 T 01-11-2018 IPR011059 Metal-dependent hydrolase, composite domain superfamily GO:0016810 CDA09_11520 af5bdcd0ef0dfed461bd03642bb7efcf 558 SUPERFAMILY SSF51556 55 450 2.59E-30 T 01-11-2018 IPR032466 Metal-dependent hydrolase CDA09_11520 af5bdcd0ef0dfed461bd03642bb7efcf 558 Gene3D G3DSA:3.20.20.140 1 71 2.0E-11 T 01-11-2018 CDA09_11520 af5bdcd0ef0dfed461bd03642bb7efcf 558 Pfam PF07969 Amidohydrolase family 43 487 2.6E-59 T 01-11-2018 IPR013108 Amidohydrolase 3 CDA09_11520 af5bdcd0ef0dfed461bd03642bb7efcf 558 SUPERFAMILY SSF51338 424 508 3.21E-23 T 01-11-2018 IPR011059 Metal-dependent hydrolase, composite domain superfamily GO:0016810 CDA09_11520 af5bdcd0ef0dfed461bd03642bb7efcf 558 TIGRFAM TIGR03121 one_C_dehyd_A: formylmethanofuran dehydrogenase subunit A 4 521 6.4E-220 T 01-11-2018 IPR012027 Formylmethanofuran dehydrogenase, subunit A CDA09_07260 6b8bfe2e6578ffbff88fcff435dfa648 235 Gene3D G3DSA:1.20.950.20 2 218 5.9E-72 T 01-11-2018 CDA09_07260 6b8bfe2e6578ffbff88fcff435dfa648 235 TIGRFAM TIGR00351 narI: respiratory nitrate reductase, gamma subunit 5 226 3.0E-74 T 01-11-2018 IPR003816 Nitrate reductase, gamma subunit GO:0008940|GO:0009325|GO:0055114 CDA09_07260 6b8bfe2e6578ffbff88fcff435dfa648 235 SUPERFAMILY SSF103501 6 226 4.18E-65 T 01-11-2018 IPR036197 NarG-like superfamily CDA09_07260 6b8bfe2e6578ffbff88fcff435dfa648 235 Pfam PF02665 Nitrate reductase gamma subunit 5 226 3.3E-78 T 01-11-2018 IPR023234 NarG-like domain CDA09_06110 d66af2fa007b0d99e5d360689144971b 137 SUPERFAMILY SSF46626 38 134 2.04E-28 T 01-11-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 CDA09_06110 d66af2fa007b0d99e5d360689144971b 137 Pfam PF09086 Domain of unknown function (DUF1924) 45 132 3.2E-37 T 01-11-2018 IPR015170 Protein of unknown function DUF1924 CDA09_06110 d66af2fa007b0d99e5d360689144971b 137 Gene3D G3DSA:1.10.760.10 23 137 1.8E-43 T 01-11-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 CDA09_22985 ebeca9e18081abf6763e082ecb903bd1 417 Gene3D G3DSA:3.40.50.2300 33 376 4.6E-137 T 01-11-2018 CDA09_22985 ebeca9e18081abf6763e082ecb903bd1 417 Gene3D G3DSA:3.40.50.2300 146 396 4.6E-137 T 01-11-2018 CDA09_22985 ebeca9e18081abf6763e082ecb903bd1 417 TIGRFAM TIGR03407 urea_ABC_UrtA: urea ABC transporter, urea binding protein 31 405 1.9E-176 T 01-11-2018 IPR017777 Urea ABC transporter, substrate-binding protein UrtA-like CDA09_22985 ebeca9e18081abf6763e082ecb903bd1 417 SUPERFAMILY SSF53822 30 409 7.54E-90 T 01-11-2018 IPR028082 Periplasmic binding protein-like I CDA09_22985 ebeca9e18081abf6763e082ecb903bd1 417 Pfam PF13433 Periplasmic binding protein domain 31 407 4.9E-168 T 01-11-2018 CDA09_17225 a30e310dd772d183edf68640449822d7 401 Pfam PF11306 Protein of unknown function (DUF3108) 123 349 4.9E-32 T 01-11-2018 IPR021457 Protein of unknown function DUF3108 CDA09_10095 f78169505c328e19714409600487b75b 181 SUPERFAMILY SSF54637 33 179 5.6E-19 T 01-11-2018 IPR029069 HotDog domain superfamily CDA09_10095 f78169505c328e19714409600487b75b 181 Pfam PF13452 N-terminal half of MaoC dehydratase 23 168 7.5E-17 T 01-11-2018 IPR039569 N-terminal of MaoC-like dehydratase Reactome: R-HSA-193368|Reactome: R-HSA-2046106|Reactome: R-HSA-389887|Reactome: R-HSA-390247|Reactome: R-HSA-9033241|Reactome: R-HSA-9033500 CDA09_10095 f78169505c328e19714409600487b75b 181 Gene3D G3DSA:3.10.129.10 18 181 6.4E-37 T 01-11-2018 CDA09_12830 36daf624299226c4b3e94a2e71100dd7 161 SUPERFAMILY SSF55826 6 147 1.31E-30 T 01-11-2018 IPR036754 YbaK/aminoacyl-tRNA synthetase-associated domain superfamily GO:0002161 KEGG: 00970+6.1.1.15 CDA09_12830 36daf624299226c4b3e94a2e71100dd7 161 Pfam PF04073 Aminoacyl-tRNA editing domain 23 140 2.2E-22 T 01-11-2018 IPR007214 YbaK/aminoacyl-tRNA synthetase-associated domain GO:0002161 KEGG: 00970+6.1.1.15 CDA09_12830 36daf624299226c4b3e94a2e71100dd7 161 Gene3D G3DSA:3.90.960.10 18 155 1.0E-43 T 01-11-2018 IPR036754 YbaK/aminoacyl-tRNA synthetase-associated domain superfamily GO:0002161 KEGG: 00970+6.1.1.15 CDA09_22605 d8d034442f1926de1c0fb6a350e74a0f 524 TIGRFAM TIGR02262 benz_CoA_lig: benzoate-CoA ligase family 12 517 2.6E-121 T 01-11-2018 IPR011957 Benzoate-CoA ligase family GO:0005524|GO:0016405 CDA09_22605 d8d034442f1926de1c0fb6a350e74a0f 524 Gene3D G3DSA:3.40.50.12780 23 415 1.1E-116 T 01-11-2018 CDA09_22605 d8d034442f1926de1c0fb6a350e74a0f 524 Pfam PF13193 AMP-binding enzyme C-terminal domain 431 509 9.6E-15 T 01-11-2018 IPR025110 AMP-binding enzyme, C-terminal domain CDA09_22605 d8d034442f1926de1c0fb6a350e74a0f 524 Gene3D G3DSA:3.30.300.30 418 523 2.9E-27 T 01-11-2018 CDA09_22605 d8d034442f1926de1c0fb6a350e74a0f 524 Pfam PF00501 AMP-binding enzyme 27 422 1.1E-93 T 01-11-2018 IPR000873 AMP-dependent synthetase/ligase GO:0003824 CDA09_22605 d8d034442f1926de1c0fb6a350e74a0f 524 SUPERFAMILY SSF56801 27 521 2.49E-143 T 01-11-2018 CDA09_18355 d231fd2126f8ccdd0de41b87464a7236 320 Pfam PF01370 NAD dependent epimerase/dehydratase family 4 224 5.8E-33 T 01-11-2018 IPR001509 NAD-dependent epimerase/dehydratase GO:0003824|GO:0050662 CDA09_18355 d231fd2126f8ccdd0de41b87464a7236 320 Gene3D G3DSA:3.40.50.720 1 320 1.5E-67 T 01-11-2018 CDA09_18355 d231fd2126f8ccdd0de41b87464a7236 320 SUPERFAMILY SSF51735 1 318 3.24E-72 T 01-11-2018 IPR036291 NAD(P)-binding domain superfamily CDA09_03785 727720f236aecf766d5017ca5f89cf79 199 Pfam PF00578 AhpC/TSA family 5 138 6.5E-35 T 01-11-2018 IPR000866 Alkyl hydroperoxide reductase subunit C/ Thiol specific antioxidant GO:0016209|GO:0016491|GO:0055114 KEGG: 00480+1.11.1.15|Reactome: R-HSA-3299685 CDA09_03785 727720f236aecf766d5017ca5f89cf79 199 PIRSF PIRSF000239 1 198 1.4E-61 T 01-11-2018 IPR024706 Peroxiredoxin, AhpC-type KEGG: 00480+1.11.1.15|Reactome: R-HSA-3299685 CDA09_03785 727720f236aecf766d5017ca5f89cf79 199 Gene3D G3DSA:3.40.30.10 1 196 6.8E-75 T 01-11-2018 CDA09_03785 727720f236aecf766d5017ca5f89cf79 199 Pfam PF10417 C-terminal domain of 1-Cys peroxiredoxin 159 192 1.7E-11 T 01-11-2018 IPR019479 Peroxiredoxin, C-terminal GO:0051920|GO:0055114 KEGG: 00480+1.11.1.15|Reactome: R-HSA-3299685 CDA09_03785 727720f236aecf766d5017ca5f89cf79 199 SUPERFAMILY SSF52833 3 195 5.93E-69 T 01-11-2018 IPR036249 Thioredoxin-like superfamily CDA09_05210 30bc347028f68a9683e42d7a61c40ab9 222 Gene3D G3DSA:3.40.50.1360 7 205 3.4E-77 T 01-11-2018 CDA09_05210 30bc347028f68a9683e42d7a61c40ab9 222 Hamap MF_00170 Ribose-5-phosphate isomerase A [rpiA]. 3 217 33.584 T 01-11-2018 IPR020672 Ribose-5-phosphate isomerase, type A, subgroup GO:0004751|GO:0009052 KEGG: 00030+5.3.1.6|KEGG: 00051+5.3.1.6|KEGG: 00710+5.3.1.6|MetaCyc: PWY-1861|MetaCyc: PWY-5723|Reactome: R-HSA-5659996|Reactome: R-HSA-6791461|Reactome: R-HSA-71336 CDA09_05210 30bc347028f68a9683e42d7a61c40ab9 222 SUPERFAMILY SSF75445 127 198 3.01E-23 T 01-11-2018 CDA09_05210 30bc347028f68a9683e42d7a61c40ab9 222 Gene3D G3DSA:3.30.70.260 125 196 3.4E-77 T 01-11-2018 CDA09_05210 30bc347028f68a9683e42d7a61c40ab9 222 TIGRFAM TIGR00021 rpiA: ribose 5-phosphate isomerase A 6 214 4.0E-69 T 01-11-2018 IPR004788 Ribose 5-phosphate isomerase, type A GO:0004751|GO:0009052 KEGG: 00030+5.3.1.6|KEGG: 00051+5.3.1.6|KEGG: 00710+5.3.1.6|MetaCyc: PWY-1861|MetaCyc: PWY-5723|Reactome: R-HSA-5659996|Reactome: R-HSA-6791461|Reactome: R-HSA-71336 CDA09_05210 30bc347028f68a9683e42d7a61c40ab9 222 SUPERFAMILY SSF100950 1 146 1.79E-47 T 01-11-2018 IPR037171 NagB/RpiA transferase-like CDA09_05210 30bc347028f68a9683e42d7a61c40ab9 222 Pfam PF06026 Ribose 5-phosphate isomerase A (phosphoriboisomerase A) 49 212 9.1E-58 T 01-11-2018 IPR004788 Ribose 5-phosphate isomerase, type A GO:0004751|GO:0009052 KEGG: 00030+5.3.1.6|KEGG: 00051+5.3.1.6|KEGG: 00710+5.3.1.6|MetaCyc: PWY-1861|MetaCyc: PWY-5723|Reactome: R-HSA-5659996|Reactome: R-HSA-6791461|Reactome: R-HSA-71336 CDA09_22035 1921b3736ba752ded72f54e3c115f5a7 72 Gene3D G3DSA:2.10.260.10 1 51 2.4E-5 T 01-11-2018 CDA09_04860 5add3e18442e3b71cc320d0d8185baa2 218 Gene3D G3DSA:1.10.260.40 1 75 9.4E-11 T 01-11-2018 CDA09_04860 5add3e18442e3b71cc320d0d8185baa2 218 SUPERFAMILY SSF47413 12 64 1.29E-8 T 01-11-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 CDA09_04860 5add3e18442e3b71cc320d0d8185baa2 218 Pfam PF13560 Helix-turn-helix domain 12 67 8.2E-8 T 01-11-2018 CDA09_04860 5add3e18442e3b71cc320d0d8185baa2 218 SMART SM00530 10 66 0.0018 T 01-11-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 CDA09_03010 a19b48a2a14e8dc56f7d183d7c04516b 414 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 25 36 - T 01-11-2018 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site CDA09_03010 a19b48a2a14e8dc56f7d183d7c04516b 414 Pfam PF02754 Cysteine-rich domain 173 255 5.2E-9 T 01-11-2018 IPR004017 Cysteine-rich domain CDA09_03010 a19b48a2a14e8dc56f7d183d7c04516b 414 Pfam PF02754 Cysteine-rich domain 307 391 3.8E-11 T 01-11-2018 IPR004017 Cysteine-rich domain CDA09_03010 a19b48a2a14e8dc56f7d183d7c04516b 414 PIRSF PIRSF000139 6 411 5.6E-113 T 01-11-2018 CDA09_03010 a19b48a2a14e8dc56f7d183d7c04516b 414 Gene3D G3DSA:1.10.1060.10 2 107 1.9E-11 T 01-11-2018 IPR009051 Alpha-helical ferredoxin GO:0051536 CDA09_03010 a19b48a2a14e8dc56f7d183d7c04516b 414 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 75 86 - T 01-11-2018 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site CDA09_03010 a19b48a2a14e8dc56f7d183d7c04516b 414 SUPERFAMILY SSF46548 11 102 5.23E-21 T 01-11-2018 IPR009051 Alpha-helical ferredoxin GO:0051536 CDA09_03010 a19b48a2a14e8dc56f7d183d7c04516b 414 Pfam PF12838 4Fe-4S dicluster domain 25 89 1.3E-12 T 01-11-2018 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain CDA09_03010 a19b48a2a14e8dc56f7d183d7c04516b 414 SUPERFAMILY SSF54862 19 218 1.59E-7 T 01-11-2018 CDA09_12765 1d204890f4974718c8486dc05caaa2eb 203 Gene3D G3DSA:1.10.357.10 3 200 3.2E-18 T 01-11-2018 CDA09_12765 1d204890f4974718c8486dc05caaa2eb 203 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 17 30 2.1E-7 T 01-11-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 CDA09_12765 1d204890f4974718c8486dc05caaa2eb 203 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 38 61 2.1E-7 T 01-11-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 CDA09_12765 1d204890f4974718c8486dc05caaa2eb 203 SUPERFAMILY SSF46689 8 71 4.0E-14 T 01-11-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 CDA09_12765 1d204890f4974718c8486dc05caaa2eb 203 Pfam PF00440 Bacterial regulatory proteins, tetR family 19 63 1.7E-12 T 01-11-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 CDA09_09630 4b9253e80e6fb881e596d56211c7e344 266 Gene3D G3DSA:3.40.1080.10 4 251 6.5E-45 T 01-11-2018 CDA09_09630 4b9253e80e6fb881e596d56211c7e344 266 SUPERFAMILY SSF100950 5 252 1.34E-51 T 01-11-2018 IPR037171 NagB/RpiA transferase-like CDA09_14515 2ce7ae95a10611a4a4c19cfc5c14597b 122 Gene3D G3DSA:3.40.30.10 2 116 9.0E-41 T 01-11-2018 CDA09_14515 2ce7ae95a10611a4a4c19cfc5c14597b 122 Pfam PF03960 ArsC family 6 111 2.2E-13 T 01-11-2018 IPR006660 Arsenate reductase-like CDA09_14515 2ce7ae95a10611a4a4c19cfc5c14597b 122 SUPERFAMILY SSF52833 3 115 6.71E-32 T 01-11-2018 IPR036249 Thioredoxin-like superfamily CDA09_14515 2ce7ae95a10611a4a4c19cfc5c14597b 122 TIGRFAM TIGR01617 arsC_related: transcriptional regulator, Spx/MgsR family 4 112 4.6E-29 T 01-11-2018 IPR006504 Transcriptional regulator Spx/MgsR CDA09_18655 d708ec2a95c0912033a09c6e9533aa7c 306 TIGRFAM TIGR00688 rarD: protein RarD 13 264 8.3E-68 T 01-11-2018 IPR004626 RarD protein GO:0005887 CDA09_18655 d708ec2a95c0912033a09c6e9533aa7c 306 SUPERFAMILY SSF103481 195 287 1.06E-8 T 01-11-2018 CDA09_18655 d708ec2a95c0912033a09c6e9533aa7c 306 SUPERFAMILY SSF103481 54 150 6.54E-10 T 01-11-2018 CDA09_18655 d708ec2a95c0912033a09c6e9533aa7c 306 Pfam PF00892 EamA-like transporter family 14 147 2.7E-11 T 01-11-2018 IPR000620 EamA domain GO:0016020|GO:0016021 CDA09_02080 21fe5f6dbff466055bd01914e33213f8 286 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 89 277 3.8E-23 T 01-11-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 CDA09_02080 21fe5f6dbff466055bd01914e33213f8 286 Gene3D G3DSA:1.10.3720.10 65 284 1.4E-27 T 01-11-2018 IPR035906 MetI-like superfamily CDA09_02080 21fe5f6dbff466055bd01914e33213f8 286 SUPERFAMILY SSF161098 29 274 1.02E-31 T 01-11-2018 IPR035906 MetI-like superfamily CDA09_02080 21fe5f6dbff466055bd01914e33213f8 286 TIGRFAM TIGR00974 3a0107s02c: phosphate ABC transporter, permease protein PstA 17 281 1.4E-81 T 01-11-2018 IPR005672 Phosphate transport system permease protein PstA GO:0005315|GO:0005887|GO:0035435 CDA09_02930 fa5a1575fe2c6608c7cae395e028733c 391 Pfam PF00482 Type II secretion system (T2SS), protein F 261 382 6.1E-25 T 01-11-2018 IPR018076 Type II secretion system F domain CDA09_02930 fa5a1575fe2c6608c7cae395e028733c 391 Pfam PF00482 Type II secretion system (T2SS), protein F 60 181 1.0E-27 T 01-11-2018 IPR018076 Type II secretion system F domain CDA09_02930 fa5a1575fe2c6608c7cae395e028733c 391 Gene3D G3DSA:1.20.81.30 51 160 5.4E-22 T 01-11-2018 CDA09_02930 fa5a1575fe2c6608c7cae395e028733c 391 Gene3D G3DSA:1.20.81.30 245 354 3.0E-21 T 01-11-2018 CDA09_02930 fa5a1575fe2c6608c7cae395e028733c 391 PRINTS PR00812 Bacterial general secretion pathway protein F signature 54 66 3.3E-13 T 01-11-2018 IPR003004 GspF/PilC family CDA09_02930 fa5a1575fe2c6608c7cae395e028733c 391 PRINTS PR00812 Bacterial general secretion pathway protein F signature 153 181 3.3E-13 T 01-11-2018 IPR003004 GspF/PilC family CDA09_02930 fa5a1575fe2c6608c7cae395e028733c 391 PRINTS PR00812 Bacterial general secretion pathway protein F signature 371 390 3.3E-13 T 01-11-2018 IPR003004 GspF/PilC family CDA09_02930 fa5a1575fe2c6608c7cae395e028733c 391 PRINTS PR00812 Bacterial general secretion pathway protein F signature 355 369 3.3E-13 T 01-11-2018 IPR003004 GspF/PilC family CDA09_08565 850238ec38799cc62582e2d424d37f0a 279 SUPERFAMILY SSF161098 5 276 1.18E-46 T 01-11-2018 IPR035906 MetI-like superfamily CDA09_08565 850238ec38799cc62582e2d424d37f0a 279 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 92 269 2.0E-16 T 01-11-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 CDA09_08565 850238ec38799cc62582e2d424d37f0a 279 Gene3D G3DSA:1.10.3720.10 10 279 2.3E-44 T 01-11-2018 IPR035906 MetI-like superfamily CDA09_07215 bd014a7aebd4801308d543c0bcc7ddae 271 Pfam PF12679 ABC-2 family transporter protein 8 271 7.0E-38 T 01-11-2018 IPR032688 ABC-2 family transporter protein GO:0055085 CDA09_10675 0e030362a08144683ec350128d7c411c 313 Pfam PF01966 HD domain 46 166 1.4E-18 T 01-11-2018 IPR006674 HD domain CDA09_10675 0e030362a08144683ec350128d7c411c 313 SUPERFAMILY SSF109604 37 204 6.54E-37 T 01-11-2018 CDA09_10675 0e030362a08144683ec350128d7c411c 313 SMART SM00471 40 175 2.1E-9 T 01-11-2018 IPR003607 HD/PDEase domain CDA09_10675 0e030362a08144683ec350128d7c411c 313 Gene3D G3DSA:1.10.3210.10 24 209 3.1E-58 T 01-11-2018 CDA09_01650 7486836613f23061dd02f6a9c5ba9a60 355 SUPERFAMILY SSF52172 1 138 1.14E-26 T 01-11-2018 IPR011006 CheY-like superfamily CDA09_01650 7486836613f23061dd02f6a9c5ba9a60 355 Pfam PF01339 CheB methylesterase 161 337 1.1E-54 T 01-11-2018 IPR000673 Signal transduction response regulator, chemotaxis, protein-glutamate methylesterase GO:0000156|GO:0000160|GO:0005737|GO:0006935|GO:0008984 CDA09_01650 7486836613f23061dd02f6a9c5ba9a60 355 Hamap MF_00099 Chemotaxis response regulator protein-glutamate methylesterase [cheB]. 1 342 33.696 T 01-11-2018 IPR008248 Signal transduction response regulator, chemotaxis, CheB GO:0000156|GO:0000160|GO:0005737|GO:0006935|GO:0008984 CDA09_01650 7486836613f23061dd02f6a9c5ba9a60 355 PIRSF PIRSF000876 1 345 6.3E-104 T 01-11-2018 IPR008248 Signal transduction response regulator, chemotaxis, CheB GO:0000156|GO:0000160|GO:0005737|GO:0006935|GO:0008984 CDA09_01650 7486836613f23061dd02f6a9c5ba9a60 355 SUPERFAMILY SSF52738 156 343 4.05E-59 T 01-11-2018 IPR035909 Methylesterase CheB, C-terminal CDA09_01650 7486836613f23061dd02f6a9c5ba9a60 355 Pfam PF00072 Response regulator receiver domain 3 107 9.1E-21 T 01-11-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 CDA09_01650 7486836613f23061dd02f6a9c5ba9a60 355 SMART SM00448 1 125 9.4E-21 T 01-11-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 CDA09_01650 7486836613f23061dd02f6a9c5ba9a60 355 Gene3D G3DSA:3.40.50.12740 1 153 1.6E-27 T 01-11-2018 CDA09_01650 7486836613f23061dd02f6a9c5ba9a60 355 Gene3D G3DSA:3.40.50.180 155 341 5.8E-63 T 01-11-2018 IPR035909 Methylesterase CheB, C-terminal CDA09_06815 5b890d724daaec439f74599506e1b361 467 TIGRFAM TIGR01026 fliI_yscN: ATPase, FliI/YscN family 11 464 1.1E-175 T 01-11-2018 IPR005714 ATPase, type III secretion system, FliI/YscN GO:0005737|GO:0009058|GO:0016887|GO:0030254|GO:0030257 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980 CDA09_06815 5b890d724daaec439f74599506e1b361 467 SMART SM00382 185 368 2.8E-7 T 01-11-2018 IPR003593 AAA+ ATPase domain CDA09_06815 5b890d724daaec439f74599506e1b361 467 Gene3D G3DSA:3.40.50.12240 21 467 8.2E-162 T 01-11-2018 CDA09_06815 5b890d724daaec439f74599506e1b361 467 ProSitePatterns PS00152 ATP synthase alpha and beta subunits signature. 375 384 - T 01-11-2018 IPR020003 ATPase, alpha/beta subunit, nucleotide-binding domain, active site GO:0005524 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980 CDA09_06815 5b890d724daaec439f74599506e1b361 467 TIGRFAM TIGR03496 FliI_clade1: flagellar protein export ATPase FliI 30 460 1.3E-198 T 01-11-2018 IPR020005 Flagellar export ATPase FliI, clade 1 GO:0016887|GO:0044780|GO:0071973 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980 CDA09_06815 5b890d724daaec439f74599506e1b361 467 SUPERFAMILY SSF52540 120 390 4.47E-94 T 01-11-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CDA09_06815 5b890d724daaec439f74599506e1b361 467 Pfam PF00006 ATP synthase alpha/beta family, nucleotide-binding domain 173 384 3.8E-72 T 01-11-2018 IPR000194 ATPase, F1/V1/A1 complex, alpha/beta subunit, nucleotide-binding domain GO:0005524 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980 CDA09_22245 4e48362f3f8445209e2ff6d9e59bae5c 386 Pfam PF13458 Periplasmic binding protein 30 376 3.8E-74 T 01-11-2018 IPR028081 Leucine-binding protein domain CDA09_22245 4e48362f3f8445209e2ff6d9e59bae5c 386 PRINTS PR00337 Leu/Ile/Val-binding protein family signature 72 90 6.1E-7 T 01-11-2018 IPR000709 Leu/Ile/Val-binding protein GO:0006865 CDA09_22245 4e48362f3f8445209e2ff6d9e59bae5c 386 PRINTS PR00337 Leu/Ile/Val-binding protein family signature 260 278 6.1E-7 T 01-11-2018 IPR000709 Leu/Ile/Val-binding protein GO:0006865 CDA09_22245 4e48362f3f8445209e2ff6d9e59bae5c 386 PRINTS PR00337 Leu/Ile/Val-binding protein family signature 31 47 6.1E-7 T 01-11-2018 IPR000709 Leu/Ile/Val-binding protein GO:0006865 CDA09_22245 4e48362f3f8445209e2ff6d9e59bae5c 386 PRINTS PR00337 Leu/Ile/Val-binding protein family signature 53 69 6.1E-7 T 01-11-2018 IPR000709 Leu/Ile/Val-binding protein GO:0006865 CDA09_22245 4e48362f3f8445209e2ff6d9e59bae5c 386 Gene3D G3DSA:3.40.50.2300 39 362 5.7E-80 T 01-11-2018 CDA09_22245 4e48362f3f8445209e2ff6d9e59bae5c 386 SUPERFAMILY SSF53822 30 381 4.04E-81 T 01-11-2018 IPR028082 Periplasmic binding protein-like I CDA09_22245 4e48362f3f8445209e2ff6d9e59bae5c 386 Gene3D G3DSA:3.40.50.2300 150 279 5.7E-80 T 01-11-2018 CDA09_20680 d9274986623c0e80e4c2a8a8eda0e6cb 430 Hamap MF_00671 Tol-Pal system protein TolB [tolB]. 8 425 46.763 T 01-11-2018 IPR014167 Tol-Pal system protein TolB GO:0017038|GO:0042597 CDA09_20680 d9274986623c0e80e4c2a8a8eda0e6cb 430 Pfam PF04052 TolB amino-terminal domain 27 127 5.8E-22 T 01-11-2018 IPR007195 TolB, N-terminal GO:0015031|GO:0042597 CDA09_20680 d9274986623c0e80e4c2a8a8eda0e6cb 430 Gene3D G3DSA:3.40.50.10070 23 162 1.1E-31 T 01-11-2018 IPR036752 TolB, N-terminal domain superfamily GO:0015031|GO:0042597 CDA09_20680 d9274986623c0e80e4c2a8a8eda0e6cb 430 Pfam PF07676 WD40-like Beta Propeller Repeat 324 356 0.002 T 01-11-2018 IPR011659 WD40-like Beta Propeller CDA09_20680 d9274986623c0e80e4c2a8a8eda0e6cb 430 Pfam PF07676 WD40-like Beta Propeller Repeat 199 227 1.1E-5 T 01-11-2018 IPR011659 WD40-like Beta Propeller CDA09_20680 d9274986623c0e80e4c2a8a8eda0e6cb 430 Pfam PF07676 WD40-like Beta Propeller Repeat 280 315 5.1E-16 T 01-11-2018 IPR011659 WD40-like Beta Propeller CDA09_20680 d9274986623c0e80e4c2a8a8eda0e6cb 430 Pfam PF07676 WD40-like Beta Propeller Repeat 371 396 0.004 T 01-11-2018 IPR011659 WD40-like Beta Propeller CDA09_20680 d9274986623c0e80e4c2a8a8eda0e6cb 430 Pfam PF07676 WD40-like Beta Propeller Repeat 240 271 5.9E-6 T 01-11-2018 IPR011659 WD40-like Beta Propeller CDA09_20680 d9274986623c0e80e4c2a8a8eda0e6cb 430 TIGRFAM TIGR02800 propeller_TolB: Tol-Pal system beta propeller repeat protein TolB 18 426 1.1E-158 T 01-11-2018 IPR014167 Tol-Pal system protein TolB GO:0017038|GO:0042597 CDA09_20680 d9274986623c0e80e4c2a8a8eda0e6cb 430 SUPERFAMILY SSF69304 152 427 1.23E-60 T 01-11-2018 CDA09_20680 d9274986623c0e80e4c2a8a8eda0e6cb 430 Gene3D G3DSA:2.120.10.30 163 430 1.2E-93 T 01-11-2018 IPR011042 Six-bladed beta-propeller, TolB-like CDA09_20680 d9274986623c0e80e4c2a8a8eda0e6cb 430 SUPERFAMILY SSF52964 32 159 1.83E-30 T 01-11-2018 CDA09_09465 13d8cc2664401a60c0da56879753f088 522 ProSitePatterns PS00571 Amidases signature. 197 228 - T 01-11-2018 IPR020556 Amidase, conserved site KEGG: 00970+6.3.5.7|MetaCyc: PWY-5921|Reactome: R-HSA-2142753 CDA09_09465 13d8cc2664401a60c0da56879753f088 522 Pfam PF01425 Amidase 68 500 3.2E-93 T 01-11-2018 IPR023631 Amidase signature domain KEGG: 00970+6.3.5.7|MetaCyc: PWY-5921 CDA09_09465 13d8cc2664401a60c0da56879753f088 522 SUPERFAMILY SSF75304 46 519 2.22E-119 T 01-11-2018 IPR036928 Amidase signature (AS) superfamily KEGG: 00970+6.3.5.7|MetaCyc: PWY-5921 CDA09_09465 13d8cc2664401a60c0da56879753f088 522 Gene3D G3DSA:3.90.1300.10 47 522 2.2E-143 T 01-11-2018 IPR036928 Amidase signature (AS) superfamily KEGG: 00970+6.3.5.7|MetaCyc: PWY-5921 CDA09_05325 d621a28f3b79dc735debe22020dc9e76 213 SUPERFAMILY SSF53254 1 205 4.16E-64 T 01-11-2018 IPR029033 Histidine phosphatase superfamily CDA09_05325 d621a28f3b79dc735debe22020dc9e76 213 Pfam PF00300 Histidine phosphatase superfamily (branch 1) 5 199 7.2E-67 T 01-11-2018 IPR013078 Histidine phosphatase superfamily, clade-1 CDA09_05325 d621a28f3b79dc735debe22020dc9e76 213 Gene3D G3DSA:3.40.50.1240 2 209 8.3E-64 T 01-11-2018 IPR029033 Histidine phosphatase superfamily CDA09_05325 d621a28f3b79dc735debe22020dc9e76 213 PIRSF PIRSF000709 2 193 3.5E-18 T 01-11-2018 CDA09_05325 d621a28f3b79dc735debe22020dc9e76 213 SMART SM00855 4 160 1.0E-23 T 01-11-2018 IPR013078 Histidine phosphatase superfamily, clade-1 CDA09_05325 d621a28f3b79dc735debe22020dc9e76 213 ProSitePatterns PS00175 Phosphoglycerate mutase family phosphohistidine signature. 7 16 - T 01-11-2018 IPR001345 Phosphoglycerate/bisphosphoglycerate mutase, active site GO:0003824 CDA09_21015 83ef1c7bac1604532cfbc8da24b43252 269 SUPERFAMILY SSF55781 92 265 1.83E-35 T 01-11-2018 CDA09_21015 83ef1c7bac1604532cfbc8da24b43252 269 Pfam PF01614 Bacterial transcriptional regulator 143 262 7.9E-15 T 01-11-2018 IPR014757 Transcription regulator IclR, C-terminal CDA09_21015 83ef1c7bac1604532cfbc8da24b43252 269 Gene3D G3DSA:3.30.450.40 103 262 1.7E-32 T 01-11-2018 IPR029016 GAF-like domain superfamily CDA09_21015 83ef1c7bac1604532cfbc8da24b43252 269 SUPERFAMILY SSF46785 25 97 4.74E-12 T 01-11-2018 IPR036390 Winged helix DNA-binding domain superfamily CDA09_21015 83ef1c7bac1604532cfbc8da24b43252 269 Gene3D G3DSA:1.10.10.10 18 93 7.6E-14 T 01-11-2018 IPR036388 Winged helix-like DNA-binding domain superfamily CDA09_21015 83ef1c7bac1604532cfbc8da24b43252 269 Pfam PF09339 IclR helix-turn-helix domain 27 78 3.9E-11 T 01-11-2018 IPR005471 Transcription regulator IclR, N-terminal GO:0003677|GO:0006355 CDA09_21015 83ef1c7bac1604532cfbc8da24b43252 269 SMART SM00346 25 115 3.8E-14 T 01-11-2018 IPR005471 Transcription regulator IclR, N-terminal GO:0003677|GO:0006355 CDA09_07900 30a74230ca5c1789f48a2d93b7c8885f 197 Gene3D G3DSA:1.10.3210.10 2 194 5.6E-51 T 01-11-2018 CDA09_07900 30a74230ca5c1789f48a2d93b7c8885f 197 Pfam PF13023 HD domain 16 179 1.9E-50 T 01-11-2018 IPR006674 HD domain CDA09_07900 30a74230ca5c1789f48a2d93b7c8885f 197 SUPERFAMILY SSF109604 7 186 1.88E-44 T 01-11-2018 CDA09_20205 69fb436136f8ba6a4be3636ccc29fccb 244 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 2 19 6.4E-14 T 01-11-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CDA09_20205 69fb436136f8ba6a4be3636ccc29fccb 244 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 169 186 6.4E-14 T 01-11-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CDA09_20205 69fb436136f8ba6a4be3636ccc29fccb 244 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 149 168 6.4E-14 T 01-11-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CDA09_20205 69fb436136f8ba6a4be3636ccc29fccb 244 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 75 86 6.4E-14 T 01-11-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CDA09_20205 69fb436136f8ba6a4be3636ccc29fccb 244 Pfam PF00106 short chain dehydrogenase 3 192 4.9E-27 T 01-11-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CDA09_20205 69fb436136f8ba6a4be3636ccc29fccb 244 Gene3D G3DSA:3.40.50.720 2 201 1.2E-43 T 01-11-2018 CDA09_20205 69fb436136f8ba6a4be3636ccc29fccb 244 SUPERFAMILY SSF51735 3 230 1.13E-33 T 01-11-2018 IPR036291 NAD(P)-binding domain superfamily CDA09_13345 463ababaf2e29ec77fb59eb95b9a83c7 153 Gene3D G3DSA:1.10.10.10 2 139 2.0E-28 T 01-11-2018 IPR036388 Winged helix-like DNA-binding domain superfamily CDA09_13345 463ababaf2e29ec77fb59eb95b9a83c7 153 PRINTS PR00598 Bacterial regulatory protein MarR family signature 64 79 1.6E-6 T 01-11-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 CDA09_13345 463ababaf2e29ec77fb59eb95b9a83c7 153 PRINTS PR00598 Bacterial regulatory protein MarR family signature 83 99 1.6E-6 T 01-11-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 CDA09_13345 463ababaf2e29ec77fb59eb95b9a83c7 153 PRINTS PR00598 Bacterial regulatory protein MarR family signature 47 63 1.6E-6 T 01-11-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 CDA09_13345 463ababaf2e29ec77fb59eb95b9a83c7 153 SMART SM00347 23 123 5.0E-18 T 01-11-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 CDA09_13345 463ababaf2e29ec77fb59eb95b9a83c7 153 Pfam PF12802 MarR family 28 86 4.0E-13 T 01-11-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 CDA09_13345 463ababaf2e29ec77fb59eb95b9a83c7 153 SUPERFAMILY SSF46785 5 142 7.75E-30 T 01-11-2018 IPR036390 Winged helix DNA-binding domain superfamily CDA09_13345 463ababaf2e29ec77fb59eb95b9a83c7 153 ProSitePatterns PS01117 MarR-type HTH domain signature. 62 96 - T 01-11-2018 IPR023187 Transcriptional regulator MarR-type, conserved site CDA09_16985 9b86da057dfa4d616de51581c88a8907 382 SUPERFAMILY SSF53901 254 363 2.34E-21 T 01-11-2018 IPR016039 Thiolase-like GO:0003824 CDA09_16985 9b86da057dfa4d616de51581c88a8907 382 SUPERFAMILY SSF53901 4 221 2.62E-32 T 01-11-2018 IPR016039 Thiolase-like GO:0003824 CDA09_16985 9b86da057dfa4d616de51581c88a8907 382 PIRSF PIRSF000429 1 379 1.3E-30 T 01-11-2018 IPR002155 Thiolase GO:0016747 CDA09_16985 9b86da057dfa4d616de51581c88a8907 382 Gene3D G3DSA:3.40.47.10 1 382 3.2E-90 T 01-11-2018 IPR016039 Thiolase-like GO:0003824 CDA09_16985 9b86da057dfa4d616de51581c88a8907 382 Pfam PF02803 Thiolase, C-terminal domain 257 354 8.1E-8 T 01-11-2018 IPR020617 Thiolase, C-terminal GO:0016747 CDA09_16985 9b86da057dfa4d616de51581c88a8907 382 Pfam PF00108 Thiolase, N-terminal domain 7 174 4.0E-7 T 01-11-2018 IPR020616 Thiolase, N-terminal GO:0016747 CDA09_17415 e518ee9f382aea4bf0dc91cf43f9fe31 311 Gene3D G3DSA:2.70.70.10 183 309 1.3E-34 T 01-11-2018 IPR011055 Duplicated hybrid motif CDA09_17415 e518ee9f382aea4bf0dc91cf43f9fe31 311 Pfam PF01551 Peptidase family M23 211 304 2.4E-30 T 01-11-2018 IPR016047 Peptidase M23 CDA09_17415 e518ee9f382aea4bf0dc91cf43f9fe31 311 Gene3D G3DSA:3.10.350.10 46 114 7.5E-19 T 01-11-2018 IPR036779 LysM domain superfamily CDA09_17415 e518ee9f382aea4bf0dc91cf43f9fe31 311 SMART SM00257 59 103 1.2E-15 T 01-11-2018 IPR018392 LysM domain CDA09_17415 e518ee9f382aea4bf0dc91cf43f9fe31 311 SUPERFAMILY SSF51261 60 308 3.4E-48 T 01-11-2018 IPR011055 Duplicated hybrid motif CDA09_17415 e518ee9f382aea4bf0dc91cf43f9fe31 311 Pfam PF01476 LysM domain 60 102 2.4E-14 T 01-11-2018 IPR018392 LysM domain CDA09_02325 1991eedcf27a5b9eb423e7c79ee16f50 604 SUPERFAMILY SSF52266 29 294 2.66E-16 T 01-11-2018 CDA09_02325 1991eedcf27a5b9eb423e7c79ee16f50 604 SMART SM00869 332 593 3.9E-28 T 01-11-2018 IPR005546 Autotransporter beta-domain CDA09_02325 1991eedcf27a5b9eb423e7c79ee16f50 604 PIRSF PIRSF037375 1 604 2.1E-145 T 01-11-2018 IPR017186 Lipase, autotransporter EstA CDA09_02325 1991eedcf27a5b9eb423e7c79ee16f50 604 TIGRFAM TIGR01414 autotrans_barl: outer membrane autotransporter barrel domain 291 604 1.9E-14 T 01-11-2018 IPR006315 Outer membrane autotransporter barrel GO:0019867 CDA09_02325 1991eedcf27a5b9eb423e7c79ee16f50 604 Pfam PF03797 Autotransporter beta-domain 335 580 8.3E-49 T 01-11-2018 IPR005546 Autotransporter beta-domain CDA09_02325 1991eedcf27a5b9eb423e7c79ee16f50 604 Gene3D G3DSA:2.40.128.130 314 604 2.6E-58 T 01-11-2018 IPR036709 Autotransporter beta-domain superfamily CDA09_02325 1991eedcf27a5b9eb423e7c79ee16f50 604 SUPERFAMILY SSF103515 313 604 7.19E-46 T 01-11-2018 IPR036709 Autotransporter beta-domain superfamily CDA09_02325 1991eedcf27a5b9eb423e7c79ee16f50 604 Gene3D G3DSA:3.40.50.1110 14 301 9.1E-78 T 01-11-2018 IPR036514 SGNH hydrolase superfamily CDA09_13020 301796cb3c64d01f3efde008d4a8fa98 641 Gene3D G3DSA:1.20.120.20 214 388 1.7E-5 T 01-11-2018 CDA09_13020 301796cb3c64d01f3efde008d4a8fa98 641 SUPERFAMILY SSF58113 215 368 8.89E-5 T 01-11-2018 CDA09_13020 301796cb3c64d01f3efde008d4a8fa98 641 Pfam PF05650 Domain of unknown function (DUF802) 320 372 3.9E-18 T 01-11-2018 IPR008520 Domain of unknown function DUF802 CDA09_11490 429cf68a6e971c69697fbe7e4f1d19ec 316 Pfam PF00753 Metallo-beta-lactamase superfamily 60 245 4.2E-17 T 01-11-2018 IPR001279 Metallo-beta-lactamase CDA09_11490 429cf68a6e971c69697fbe7e4f1d19ec 316 Gene3D G3DSA:3.60.15.10 33 272 4.9E-40 T 01-11-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like CDA09_11490 429cf68a6e971c69697fbe7e4f1d19ec 316 SUPERFAMILY SSF56281 19 299 1.68E-51 T 01-11-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like CDA09_11490 429cf68a6e971c69697fbe7e4f1d19ec 316 TIGRFAM TIGR04559 SoxH_rel_PQQ_2: quinoprotein relay system zinc metallohydrolase 2 35 316 1.1E-116 T 01-11-2018 IPR030829 Quinoprotein relay system zinc metallohydrolase 2 CDA09_11490 429cf68a6e971c69697fbe7e4f1d19ec 316 SMART SM00849 62 245 7.5E-13 T 01-11-2018 IPR001279 Metallo-beta-lactamase CDA09_16445 a8730aae57389bd131fbe09ecd15d7aa 905 TIGRFAM TIGR03504 FimV_Cterm: FimV C-terminal domain 861 904 7.6E-18 T 01-11-2018 IPR020011 Motility protein FimV, C-terminal CDA09_16445 a8730aae57389bd131fbe09ecd15d7aa 905 Gene3D G3DSA:1.20.58.2200 845 904 2.4E-18 T 01-11-2018 IPR038440 FimV, C-terminal domain superfamily CDA09_16445 a8730aae57389bd131fbe09ecd15d7aa 905 TIGRFAM TIGR03505 FimV_core: FimV N-terminal domain 176 247 8.6E-26 T 01-11-2018 IPR020012 Motility protein FimV, N-terminal CDA09_01215 14a5d18914819e8e4e845efab2fa9afd 368 SUPERFAMILY SSF52540 14 199 1.64E-36 T 01-11-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CDA09_01215 14a5d18914819e8e4e845efab2fa9afd 368 Gene3D G3DSA:3.40.50.300 13 217 5.7E-62 T 01-11-2018 CDA09_01215 14a5d18914819e8e4e845efab2fa9afd 368 Pfam PF02492 CobW/HypB/UreG, nucleotide-binding domain 17 198 7.5E-48 T 01-11-2018 IPR003495 CobW/HypB/UreG, nucleotide-binding domain CDA09_01215 14a5d18914819e8e4e845efab2fa9afd 368 SMART SM00833 265 363 8.2E-24 T 01-11-2018 IPR011629 Cobalamin (vitamin B12) biosynthesis CobW-like, C-terminal CDA09_01215 14a5d18914819e8e4e845efab2fa9afd 368 SUPERFAMILY SSF90002 265 361 1.31E-18 T 01-11-2018 CDA09_01215 14a5d18914819e8e4e845efab2fa9afd 368 Pfam PF07683 Cobalamin synthesis protein cobW C-terminal domain 265 361 3.0E-17 T 01-11-2018 IPR011629 Cobalamin (vitamin B12) biosynthesis CobW-like, C-terminal CDA09_01215 14a5d18914819e8e4e845efab2fa9afd 368 Gene3D G3DSA:3.30.1220.10 249 362 1.7E-18 T 01-11-2018 IPR036627 CobW-like, C-terminal domain superfamily CDA09_05775 9723146dccee9b7b1be4439275160c29 307 SUPERFAMILY SSF161098 29 284 5.76E-57 T 01-11-2018 IPR035906 MetI-like superfamily CDA09_05775 9723146dccee9b7b1be4439275160c29 307 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 95 288 3.1E-15 T 01-11-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 CDA09_05775 9723146dccee9b7b1be4439275160c29 307 TIGRFAM TIGR00969 3a0106s02: sulfate ABC transporter, permease protein 26 288 4.6E-100 T 01-11-2018 IPR005667 Sulphate ABC transporter permease protein 2 GO:0008272|GO:0015419|GO:0016020 CDA09_05775 9723146dccee9b7b1be4439275160c29 307 Gene3D G3DSA:1.10.3720.10 33 291 1.5E-64 T 01-11-2018 IPR035906 MetI-like superfamily CDA09_05775 9723146dccee9b7b1be4439275160c29 307 TIGRFAM TIGR02140 permease_CysW: sulfate ABC transporter, permease protein CysW 31 290 2.5E-125 T 01-11-2018 IPR011866 Sulphate ABC transporter, permease protein CysW GO:0008272|GO:0015116|GO:0016021 CDA09_15420 b3531b630354d5735adeb8e2e2adada4 354 Gene3D G3DSA:3.40.50.300 1 188 1.3E-50 T 01-11-2018 CDA09_15420 b3531b630354d5735adeb8e2e2adada4 354 SUPERFAMILY SSF52540 4 224 9.69E-47 T 01-11-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CDA09_15420 b3531b630354d5735adeb8e2e2adada4 354 Pfam PF13177 DNA polymerase III, delta subunit 19 188 5.5E-42 T 01-11-2018 CDA09_15420 b3531b630354d5735adeb8e2e2adada4 354 TIGRFAM TIGR00678 holB: DNA polymerase III, delta' subunit 18 218 1.8E-62 T 01-11-2018 IPR004622 DNA polymerase III, delta prime subunit GO:0003887|GO:0006260|GO:0008408 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 CDA09_00580 e1eb8ef6b0317abc537a9420d28a6c19 173 PIRSF PIRSF018472 7 166 2.7E-42 T 01-11-2018 IPR026034 Cell shape-determining protein MreD, proteobacterial type CDA09_00580 e1eb8ef6b0317abc537a9420d28a6c19 173 Pfam PF04093 rod shape-determining protein MreD 16 157 4.6E-16 T 01-11-2018 IPR007227 Cell shape-determining protein MreD GO:0008360|GO:0016021 CDA09_00580 e1eb8ef6b0317abc537a9420d28a6c19 173 TIGRFAM TIGR03426 shape_MreD: rod shape-determining protein MreD 15 158 3.4E-32 T 01-11-2018 IPR007227 Cell shape-determining protein MreD GO:0008360|GO:0016021 CDA09_06790 2b5a710464a8b399f1976303ff5e5de2 158 Pfam PF01052 Type III flagellar switch regulator (C-ring) FliN C-term 77 147 3.1E-25 T 01-11-2018 IPR001543 Surface presentation of antigen (SpoA) CDA09_06790 2b5a710464a8b399f1976303ff5e5de2 158 Gene3D G3DSA:2.30.330.10 68 157 6.6E-34 T 01-11-2018 IPR036429 SpoA-like superfamily CDA09_06790 2b5a710464a8b399f1976303ff5e5de2 158 TIGRFAM TIGR02480 fliN: flagellar motor switch protein FliN 75 148 7.6E-33 T 01-11-2018 IPR012826 Flagellar motor switch FliN GO:0006935|GO:0009288|GO:0016020|GO:0071973 CDA09_06790 2b5a710464a8b399f1976303ff5e5de2 158 SUPERFAMILY SSF101801 75 155 1.83E-25 T 01-11-2018 IPR036429 SpoA-like superfamily CDA09_06790 2b5a710464a8b399f1976303ff5e5de2 158 PRINTS PR00956 Flagellar motor switch protein FliN signature 94 110 5.3E-29 T 01-11-2018 IPR001172 Flagellar motor switch FliN/Type III secretion HrcQb GO:0003774|GO:0006935|GO:0009425|GO:0071973 CDA09_06790 2b5a710464a8b399f1976303ff5e5de2 158 PRINTS PR00956 Flagellar motor switch protein FliN signature 110 123 5.3E-29 T 01-11-2018 IPR001172 Flagellar motor switch FliN/Type III secretion HrcQb GO:0003774|GO:0006935|GO:0009425|GO:0071973 CDA09_06790 2b5a710464a8b399f1976303ff5e5de2 158 PRINTS PR00956 Flagellar motor switch protein FliN signature 123 138 5.3E-29 T 01-11-2018 IPR001172 Flagellar motor switch FliN/Type III secretion HrcQb GO:0003774|GO:0006935|GO:0009425|GO:0071973 CDA09_06790 2b5a710464a8b399f1976303ff5e5de2 158 PRINTS PR00956 Flagellar motor switch protein FliN signature 77 93 5.3E-29 T 01-11-2018 IPR001172 Flagellar motor switch FliN/Type III secretion HrcQb GO:0003774|GO:0006935|GO:0009425|GO:0071973 CDA09_07785 fc5a295ff15e19b30a3f3f491aff5918 308 Gene3D G3DSA:3.20.20.100 32 293 2.0E-46 T 01-11-2018 IPR036812 NADP-dependent oxidoreductase domain superfamily CDA09_07785 fc5a295ff15e19b30a3f3f491aff5918 308 PRINTS PR00069 Aldo-keto reductase signature 78 102 7.4E-5 T 01-11-2018 IPR020471 Aldo/keto reductase GO:0016491|GO:0055114 CDA09_07785 fc5a295ff15e19b30a3f3f491aff5918 308 PRINTS PR00069 Aldo-keto reductase signature 132 150 7.4E-5 T 01-11-2018 IPR020471 Aldo/keto reductase GO:0016491|GO:0055114 CDA09_07785 fc5a295ff15e19b30a3f3f491aff5918 308 PRINTS PR00069 Aldo-keto reductase signature 160 177 7.4E-5 T 01-11-2018 IPR020471 Aldo/keto reductase GO:0016491|GO:0055114 CDA09_07785 fc5a295ff15e19b30a3f3f491aff5918 308 PRINTS PR00069 Aldo-keto reductase signature 238 262 7.4E-5 T 01-11-2018 IPR020471 Aldo/keto reductase GO:0016491|GO:0055114 CDA09_07785 fc5a295ff15e19b30a3f3f491aff5918 308 Pfam PF00248 Aldo/keto reductase family 51 289 2.7E-30 T 01-11-2018 IPR023210 NADP-dependent oxidoreductase domain CDA09_07785 fc5a295ff15e19b30a3f3f491aff5918 308 SUPERFAMILY SSF51430 36 288 2.49E-52 T 01-11-2018 IPR036812 NADP-dependent oxidoreductase domain superfamily CDA09_19440 ddc3dfa67df00f3258b021f8d4bfc01f 174 Gene3D G3DSA:3.30.160.20 10 81 5.1E-25 T 01-11-2018 CDA09_19440 ddc3dfa67df00f3258b021f8d4bfc01f 174 SUPERFAMILY SSF54768 16 84 2.3E-20 T 01-11-2018 CDA09_19440 ddc3dfa67df00f3258b021f8d4bfc01f 174 SUPERFAMILY SSF54211 87 167 1.11E-25 T 01-11-2018 IPR020568 Ribosomal protein S5 domain 2-type fold CDA09_19440 ddc3dfa67df00f3258b021f8d4bfc01f 174 Hamap MF_01307_B 30S ribosomal protein S5 [rpsE]. 1 171 33.274 T 01-11-2018 IPR005712 Ribosomal protein S5, bacterial-type GO:0003735|GO:0006412|GO:0015935 CDA09_19440 ddc3dfa67df00f3258b021f8d4bfc01f 174 TIGRFAM TIGR01021 rpsE_bact: ribosomal protein uS5 18 171 8.1E-61 T 01-11-2018 IPR005712 Ribosomal protein S5, bacterial-type GO:0003735|GO:0006412|GO:0015935 CDA09_19440 ddc3dfa67df00f3258b021f8d4bfc01f 174 ProSitePatterns PS00585 Ribosomal protein S5 signature. 36 68 - T 01-11-2018 IPR018192 Ribosomal protein S5, N-terminal, conserved site CDA09_19440 ddc3dfa67df00f3258b021f8d4bfc01f 174 Pfam PF03719 Ribosomal protein S5, C-terminal domain 95 165 2.3E-29 T 01-11-2018 IPR005324 Ribosomal protein S5, C-terminal GO:0003735|GO:0005840|GO:0006412 CDA09_19440 ddc3dfa67df00f3258b021f8d4bfc01f 174 Pfam PF00333 Ribosomal protein S5, N-terminal domain 19 82 1.2E-23 T 01-11-2018 IPR013810 Ribosomal protein S5, N-terminal GO:0003723|GO:0003735|GO:0005840|GO:0006412 CDA09_19440 ddc3dfa67df00f3258b021f8d4bfc01f 174 Gene3D G3DSA:3.30.230.10 82 174 1.3E-36 T 01-11-2018 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup CDA09_17715 03919fab4784c76a70d15766bb334b6c 147 Gene3D G3DSA:3.30.370.10 42 128 1.8E-12 T 01-11-2018 IPR035905 Barstar-like superfamily CDA09_17715 03919fab4784c76a70d15766bb334b6c 147 SUPERFAMILY SSF52038 42 131 1.44E-23 T 01-11-2018 IPR035905 Barstar-like superfamily CDA09_17715 03919fab4784c76a70d15766bb334b6c 147 Pfam PF01337 Barstar (barnase inhibitor) 44 123 8.0E-26 T 01-11-2018 IPR000468 Barstar (barnase inhibitor) CDA09_11445 58c209e3498a3f147186435af63bea52 200 SUPERFAMILY SSF53633 1 142 2.69E-12 T 01-11-2018 IPR036393 Acetylglutamate kinase-like superfamily CDA09_11445 58c209e3498a3f147186435af63bea52 200 Gene3D G3DSA:3.40.1160.10 1 148 4.7E-20 T 01-11-2018 IPR036393 Acetylglutamate kinase-like superfamily CDA09_17405 538c3721e0a58358f347b873fc093eb1 336 Gene3D G3DSA:1.10.8.350 32 198 1.0E-105 T 01-11-2018 CDA09_17405 538c3721e0a58358f347b873fc093eb1 336 Gene3D G3DSA:1.10.530.10 70 323 1.0E-105 T 01-11-2018 CDA09_17405 538c3721e0a58358f347b873fc093eb1 336 Pfam PF13406 Transglycosylase SLT domain 29 322 2.1E-92 T 01-11-2018 IPR031304 Transglycosylase SLT domain 2 CDA09_17405 538c3721e0a58358f347b873fc093eb1 336 TIGRFAM TIGR02282 MltB: lytic murein transglycosylase B 34 324 3.0E-109 T 01-11-2018 IPR011757 Lytic transglycosylase MltB CDA09_17405 538c3721e0a58358f347b873fc093eb1 336 SUPERFAMILY SSF53955 20 327 1.87E-84 T 01-11-2018 IPR023346 Lysozyme-like domain superfamily CDA09_10730 8cbaa6e86040563d2694f746c1e19884 94 Gene3D G3DSA:3.30.70.100 1 82 6.6E-15 T 01-11-2018 CDA09_10730 8cbaa6e86040563d2694f746c1e19884 94 Pfam PF00403 Heavy-metal-associated domain 16 76 2.2E-9 T 01-11-2018 IPR006121 Heavy metal-associated domain, HMA GO:0030001|GO:0046872 CDA09_10730 8cbaa6e86040563d2694f746c1e19884 94 SUPERFAMILY SSF55008 10 79 1.57E-15 T 01-11-2018 IPR036163 Heavy metal-associated domain superfamily GO:0030001|GO:0046872 CDA09_07975 a9343fbf0cf18b86e9b29f26a89781bd 321 Pfam PF01548 Transposase 9 156 6.1E-27 T 01-11-2018 IPR002525 Transposase, IS111A/IS1328/IS1533, N-terminal GO:0003677|GO:0004803|GO:0006313 CDA09_07975 a9343fbf0cf18b86e9b29f26a89781bd 321 Pfam PF02371 Transposase IS116/IS110/IS902 family 197 280 1.7E-20 T 01-11-2018 IPR003346 Transposase, IS116/IS110/IS902 GO:0003677|GO:0004803|GO:0006313 CDA09_11385 a9343fbf0cf18b86e9b29f26a89781bd 321 Pfam PF01548 Transposase 9 156 6.1E-27 T 01-11-2018 IPR002525 Transposase, IS111A/IS1328/IS1533, N-terminal GO:0003677|GO:0004803|GO:0006313 CDA09_11385 a9343fbf0cf18b86e9b29f26a89781bd 321 Pfam PF02371 Transposase IS116/IS110/IS902 family 197 280 1.7E-20 T 01-11-2018 IPR003346 Transposase, IS116/IS110/IS902 GO:0003677|GO:0004803|GO:0006313 CDA09_17915 a9343fbf0cf18b86e9b29f26a89781bd 321 Pfam PF01548 Transposase 9 156 6.1E-27 T 01-11-2018 IPR002525 Transposase, IS111A/IS1328/IS1533, N-terminal GO:0003677|GO:0004803|GO:0006313 CDA09_17915 a9343fbf0cf18b86e9b29f26a89781bd 321 Pfam PF02371 Transposase IS116/IS110/IS902 family 197 280 1.7E-20 T 01-11-2018 IPR003346 Transposase, IS116/IS110/IS902 GO:0003677|GO:0004803|GO:0006313 CDA09_20755 a9343fbf0cf18b86e9b29f26a89781bd 321 Pfam PF01548 Transposase 9 156 6.1E-27 T 01-11-2018 IPR002525 Transposase, IS111A/IS1328/IS1533, N-terminal GO:0003677|GO:0004803|GO:0006313 CDA09_20755 a9343fbf0cf18b86e9b29f26a89781bd 321 Pfam PF02371 Transposase IS116/IS110/IS902 family 197 280 1.7E-20 T 01-11-2018 IPR003346 Transposase, IS116/IS110/IS902 GO:0003677|GO:0004803|GO:0006313 CDA09_21820 3b1a5c2e2b79cf543938433802e0e064 123 SUPERFAMILY SSF53067 3 106 4.35E-11 T 01-11-2018 CDA09_21820 3b1a5c2e2b79cf543938433802e0e064 123 Pfam PF01869 BadF/BadG/BcrA/BcrD ATPase family 6 104 5.7E-21 T 01-11-2018 IPR002731 ATPase, BadF/BadG/BcrA/BcrD type Reactome: R-HSA-446210 CDA09_21820 3b1a5c2e2b79cf543938433802e0e064 123 Gene3D G3DSA:3.30.420.40 2 109 9.0E-35 T 01-11-2018 CDA09_04450 a1a17a9c07a94f18f2458c30969d1f3c 386 Hamap MF_00900 GTPase HflX [hflX]. 27 385 45.897 T 01-11-2018 IPR016496 GTPase HflX GO:0005525 CDA09_04450 a1a17a9c07a94f18f2458c30969d1f3c 386 Pfam PF01926 50S ribosome-binding GTPase 200 318 5.6E-19 T 01-11-2018 IPR006073 GTP binding domain GO:0005525 CDA09_04450 a1a17a9c07a94f18f2458c30969d1f3c 386 Pfam PF13167 GTP-binding GTPase N-terminal 25 112 3.2E-29 T 01-11-2018 IPR025121 GTPase HflX, N-terminal CDA09_04450 a1a17a9c07a94f18f2458c30969d1f3c 386 PIRSF PIRSF006809 3 374 9.9E-138 T 01-11-2018 IPR016496 GTPase HflX GO:0005525 CDA09_04450 a1a17a9c07a94f18f2458c30969d1f3c 386 Gene3D G3DSA:3.40.50.300 199 367 4.0E-39 T 01-11-2018 CDA09_04450 a1a17a9c07a94f18f2458c30969d1f3c 386 TIGRFAM TIGR03156 GTP_HflX: GTP-binding protein HflX 10 358 5.5E-148 T 01-11-2018 IPR016496 GTPase HflX GO:0005525 CDA09_04450 a1a17a9c07a94f18f2458c30969d1f3c 386 SUPERFAMILY SSF52540 197 362 2.66E-40 T 01-11-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CDA09_04450 a1a17a9c07a94f18f2458c30969d1f3c 386 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 267 285 2.8E-8 T 01-11-2018 IPR006073 GTP binding domain GO:0005525 CDA09_04450 a1a17a9c07a94f18f2458c30969d1f3c 386 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 200 220 2.8E-8 T 01-11-2018 IPR006073 GTP binding domain GO:0005525 CDA09_04450 a1a17a9c07a94f18f2458c30969d1f3c 386 Gene3D G3DSA:3.40.50.11060 18 138 3.0E-37 T 01-11-2018 CDA09_04450 a1a17a9c07a94f18f2458c30969d1f3c 386 Pfam PF16360 GTP-binding GTPase Middle Region 114 192 1.2E-27 T 01-11-2018 IPR032305 GTP-binding protein, middle domain CDA09_20745 1df9f9e3de25fcb05ad4bfe2d21a2c19 347 SUPERFAMILY SSF52540 36 341 9.67E-18 T 01-11-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CDA09_20745 1df9f9e3de25fcb05ad4bfe2d21a2c19 347 Gene3D G3DSA:3.40.50.300 11 216 3.3E-10 T 01-11-2018 CDA09_20745 1df9f9e3de25fcb05ad4bfe2d21a2c19 347 SMART SM00487 13 226 0.009 T 01-11-2018 IPR014001 Helicase superfamily 1/2, ATP-binding domain CDA09_20745 1df9f9e3de25fcb05ad4bfe2d21a2c19 347 TIGRFAM TIGR02621 cas3_GSU0051: CRISPR-associated helicase Cas3, subtype Dpsyc 4 344 6.2E-84 T 01-11-2018 IPR013444 Helicase Cas3, CRISPR-associated, Anaes-subtype CDA09_20745 1df9f9e3de25fcb05ad4bfe2d21a2c19 347 Pfam PF04851 Type III restriction enzyme, res subunit 20 204 1.1E-6 T 01-11-2018 IPR006935 Helicase/UvrB, N-terminal GO:0003677|GO:0005524|GO:0016787 CDA09_13830 8c41125bad43a6f47bc7048c1082fc8e 351 Pfam PF00441 Acyl-CoA dehydrogenase, C-terminal domain 194 304 9.6E-13 T 01-11-2018 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal GO:0016627|GO:0055114 CDA09_13830 8c41125bad43a6f47bc7048c1082fc8e 351 Gene3D G3DSA:1.10.540.10 1 106 9.4E-9 T 01-11-2018 IPR037069 Acyl-CoA dehydrogenase/oxidase, N-terminal domain superfamily GO:0016627|GO:0050660|GO:0055114 CDA09_13830 8c41125bad43a6f47bc7048c1082fc8e 351 SUPERFAMILY SSF56645 7 114 1.13E-8 T 01-11-2018 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain superfamily GO:0016627|GO:0055114 CDA09_13830 8c41125bad43a6f47bc7048c1082fc8e 351 SUPERFAMILY SSF47203 194 328 7.25E-25 T 01-11-2018 IPR036250 Acyl-CoA dehydrogenase-like, C-terminal GO:0016627|GO:0055114 CDA09_13830 8c41125bad43a6f47bc7048c1082fc8e 351 Gene3D G3DSA:1.20.140.10 192 329 2.3E-21 T 01-11-2018 CDA09_04460 a5bf3889089cd867ddfdc6e8e3c3c5d5 293 SMART SM00244 21 185 1.3E-29 T 01-11-2018 IPR001107 Band 7 domain CDA09_04460 a5bf3889089cd867ddfdc6e8e3c3c5d5 293 PIRSF PIRSF005651 1 293 5.8E-93 T 01-11-2018 IPR010200 HflC GO:0016021|GO:0052547 CDA09_04460 a5bf3889089cd867ddfdc6e8e3c3c5d5 293 PRINTS PR00721 Stomatin signature 77 98 9.7E-7 T 01-11-2018 IPR001972 Stomatin family GO:0016020 CDA09_04460 a5bf3889089cd867ddfdc6e8e3c3c5d5 293 PRINTS PR00721 Stomatin signature 161 179 9.7E-7 T 01-11-2018 IPR001972 Stomatin family GO:0016020 CDA09_04460 a5bf3889089cd867ddfdc6e8e3c3c5d5 293 PRINTS PR00721 Stomatin signature 180 201 9.7E-7 T 01-11-2018 IPR001972 Stomatin family GO:0016020 CDA09_04460 a5bf3889089cd867ddfdc6e8e3c3c5d5 293 PRINTS PR00721 Stomatin signature 28 50 9.7E-7 T 01-11-2018 IPR001972 Stomatin family GO:0016020 CDA09_04460 a5bf3889089cd867ddfdc6e8e3c3c5d5 293 SUPERFAMILY SSF117892 53 191 9.81E-31 T 01-11-2018 IPR036013 Band 7/SPFH domain superfamily CDA09_04460 a5bf3889089cd867ddfdc6e8e3c3c5d5 293 Gene3D G3DSA:3.30.479.30 50 187 1.1E-25 T 01-11-2018 CDA09_04460 a5bf3889089cd867ddfdc6e8e3c3c5d5 293 Pfam PF01145 SPFH domain / Band 7 family 25 200 2.6E-28 T 01-11-2018 IPR001107 Band 7 domain CDA09_04460 a5bf3889089cd867ddfdc6e8e3c3c5d5 293 TIGRFAM TIGR01932 hflC: HflC protein 143 285 2.6E-46 T 01-11-2018 IPR010200 HflC GO:0016021|GO:0052547 CDA09_11765 ca55dde5d0a36a5b09e797ba3cffeef1 156 PRINTS PR00598 Bacterial regulatory protein MarR family signature 63 79 1.4E-7 T 01-11-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 CDA09_11765 ca55dde5d0a36a5b09e797ba3cffeef1 156 PRINTS PR00598 Bacterial regulatory protein MarR family signature 99 115 1.4E-7 T 01-11-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 CDA09_11765 ca55dde5d0a36a5b09e797ba3cffeef1 156 PRINTS PR00598 Bacterial regulatory protein MarR family signature 80 95 1.4E-7 T 01-11-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 CDA09_11765 ca55dde5d0a36a5b09e797ba3cffeef1 156 Pfam PF12802 MarR family 42 103 5.9E-13 T 01-11-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 CDA09_11765 ca55dde5d0a36a5b09e797ba3cffeef1 156 SUPERFAMILY SSF46785 7 153 7.23E-32 T 01-11-2018 IPR036390 Winged helix DNA-binding domain superfamily CDA09_11765 ca55dde5d0a36a5b09e797ba3cffeef1 156 SMART SM00347 36 139 8.8E-26 T 01-11-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 CDA09_11765 ca55dde5d0a36a5b09e797ba3cffeef1 156 ProSitePatterns PS01117 MarR-type HTH domain signature. 78 112 - T 01-11-2018 IPR023187 Transcriptional regulator MarR-type, conserved site CDA09_11765 ca55dde5d0a36a5b09e797ba3cffeef1 156 Gene3D G3DSA:1.10.10.10 2 155 1.3E-32 T 01-11-2018 IPR036388 Winged helix-like DNA-binding domain superfamily CDA09_11815 35ef30b29d3fc0a00618850eb2f1c2a5 196 Pfam PF12804 MobA-like NTP transferase domain 13 170 3.0E-33 T 01-11-2018 IPR025877 MobA-like NTP transferase CDA09_11815 35ef30b29d3fc0a00618850eb2f1c2a5 196 SUPERFAMILY SSF53448 11 193 6.76E-22 T 01-11-2018 IPR029044 Nucleotide-diphospho-sugar transferases CDA09_11815 35ef30b29d3fc0a00618850eb2f1c2a5 196 Gene3D G3DSA:3.90.550.10 9 196 1.6E-44 T 01-11-2018 IPR029044 Nucleotide-diphospho-sugar transferases CDA09_01200 31245d338e722d52f8819a2b24044b5c 204 Gene3D G3DSA:3.40.50.300 7 180 2.8E-67 T 01-11-2018 CDA09_01200 31245d338e722d52f8819a2b24044b5c 204 Pfam PF00625 Guanylate kinase 4 181 1.8E-46 T 01-11-2018 IPR008145 Guanylate kinase/L-type calcium channel beta subunit CDA09_01200 31245d338e722d52f8819a2b24044b5c 204 SUPERFAMILY SSF52540 2 186 2.26E-66 T 01-11-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CDA09_01200 31245d338e722d52f8819a2b24044b5c 204 TIGRFAM TIGR03263 guanyl_kin: guanylate kinase 3 181 1.7E-71 T 01-11-2018 IPR017665 Guanylate kinase GO:0004385|GO:0006163 KEGG: 00230+2.7.4.8|MetaCyc: PWY-7221|Reactome: R-HSA-2161541|Reactome: R-HSA-499943 CDA09_01200 31245d338e722d52f8819a2b24044b5c 204 Hamap MF_00328 Guanylate kinase [gmk]. 1 184 37.251 T 01-11-2018 IPR017665 Guanylate kinase GO:0004385|GO:0006163 KEGG: 00230+2.7.4.8|MetaCyc: PWY-7221|Reactome: R-HSA-2161541|Reactome: R-HSA-499943 CDA09_01200 31245d338e722d52f8819a2b24044b5c 204 SMART SM00072 2 184 1.4E-62 T 01-11-2018 IPR008145 Guanylate kinase/L-type calcium channel beta subunit CDA09_01200 31245d338e722d52f8819a2b24044b5c 204 Gene3D G3DSA:3.30.63.10 34 93 2.8E-67 T 01-11-2018 CDA09_01200 31245d338e722d52f8819a2b24044b5c 204 ProSitePatterns PS00856 Guanylate kinase-like signature. 37 54 - T 01-11-2018 IPR020590 Guanylate kinase, conserved site KEGG: 00230+2.7.4.8|MetaCyc: PWY-7221 CDA09_10030 b3a57c4db2eaeb2587890d2db2fac1d8 399 Gene3D G3DSA:3.30.1540.10 235 327 3.3E-128 T 01-11-2018 CDA09_10030 b3a57c4db2eaeb2587890d2db2fac1d8 399 Gene3D G3DSA:3.40.50.10540 7 393 3.3E-128 T 01-11-2018 IPR023606 CoA-transferase family III domain superfamily CDA09_10030 b3a57c4db2eaeb2587890d2db2fac1d8 399 SUPERFAMILY SSF89796 6 399 1.83E-133 T 01-11-2018 IPR023606 CoA-transferase family III domain superfamily CDA09_10030 b3a57c4db2eaeb2587890d2db2fac1d8 399 Pfam PF02515 CoA-transferase family III 8 376 3.4E-121 T 01-11-2018 IPR003673 CoA-transferase family III GO:0003824 CDA09_12680 465107d2566084b29a25a1c2f5468713 203 Gene3D G3DSA:1.10.357.10 12 198 9.6E-42 T 01-11-2018 CDA09_12680 465107d2566084b29a25a1c2f5468713 203 ProSitePatterns PS01081 TetR-type HTH domain signature. 29 59 - T 01-11-2018 IPR023772 DNA-binding HTH domain, TetR-type, conserved site CDA09_12680 465107d2566084b29a25a1c2f5468713 203 SUPERFAMILY SSF48498 85 199 1.76E-20 T 01-11-2018 IPR036271 Tetracyclin repressor-like, C-terminal domain superfamily CDA09_12680 465107d2566084b29a25a1c2f5468713 203 Pfam PF00440 Bacterial regulatory proteins, tetR family 18 63 3.6E-7 T 01-11-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 CDA09_12680 465107d2566084b29a25a1c2f5468713 203 SUPERFAMILY SSF46689 4 88 1.54E-13 T 01-11-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 CDA09_04115 03ccf9048f1a7d0ad01ae87d838ee14c 163 Gene3D G3DSA:3.10.129.10 1 153 8.2E-57 T 01-11-2018 CDA09_04115 03ccf9048f1a7d0ad01ae87d838ee14c 163 Pfam PF03061 Thioesterase superfamily 23 96 8.3E-15 T 01-11-2018 IPR006683 Thioesterase domain Reactome: R-HSA-77289 CDA09_04115 03ccf9048f1a7d0ad01ae87d838ee14c 163 SUPERFAMILY SSF54637 4 154 5.57E-45 T 01-11-2018 IPR029069 HotDog domain superfamily CDA09_08495 d701bc6235d1ed14286c0db6a6d8dc12 285 Pfam PF02653 Branched-chain amino acid transport system / permease component 4 271 2.9E-41 T 01-11-2018 IPR001851 ABC transporter, permease GO:0016020|GO:0022857|GO:0055085 CDA09_22055 365639c28ecced82e2fbf51af4dd689d 195 Gene3D G3DSA:1.10.530.10 33 186 8.0E-7 T 01-11-2018 CDA09_22055 365639c28ecced82e2fbf51af4dd689d 195 Pfam PF01464 Transglycosylase SLT domain 37 159 3.1E-6 T 01-11-2018 IPR008258 Transglycosylase SLT domain 1 CDA09_22055 365639c28ecced82e2fbf51af4dd689d 195 SUPERFAMILY SSF53955 36 180 2.14E-14 T 01-11-2018 IPR023346 Lysozyme-like domain superfamily CDA09_07770 26ad45d02f71e471753ce5103746c4ed 720 Pfam PF00593 TonB dependent receptor 282 716 2.4E-49 T 01-11-2018 IPR000531 TonB-dependent receptor-like, beta-barrel CDA09_07770 26ad45d02f71e471753ce5103746c4ed 720 Gene3D G3DSA:2.170.130.10 43 170 2.5E-20 T 01-11-2018 IPR037066 TonB-dependent receptor, plug domain superfamily CDA09_07770 26ad45d02f71e471753ce5103746c4ed 720 SUPERFAMILY SSF56935 35 718 4.09E-114 T 01-11-2018 CDA09_07770 26ad45d02f71e471753ce5103746c4ed 720 Pfam PF07715 TonB-dependent Receptor Plug Domain 58 166 4.0E-16 T 01-11-2018 IPR012910 TonB-dependent receptor, plug domain CDA09_07770 26ad45d02f71e471753ce5103746c4ed 720 Gene3D G3DSA:2.40.170.20 189 720 5.1E-93 T 01-11-2018 IPR036942 TonB-dependent receptor-like, beta-barrel domain superfamily CDA09_20485 d15ac70195c71e6cb4230095a6a6d09c 232 SUPERFAMILY SSF46894 126 219 5.1E-19 T 01-11-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 CDA09_20485 d15ac70195c71e6cb4230095a6a6d09c 232 Pfam PF00072 Response regulator receiver domain 4 112 5.1E-21 T 01-11-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 CDA09_20485 d15ac70195c71e6cb4230095a6a6d09c 232 SUPERFAMILY SSF52172 2 118 7.54E-32 T 01-11-2018 IPR011006 CheY-like superfamily CDA09_20485 d15ac70195c71e6cb4230095a6a6d09c 232 SMART SM00862 145 218 1.7E-17 T 01-11-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 CDA09_20485 d15ac70195c71e6cb4230095a6a6d09c 232 Gene3D G3DSA:3.40.50.2300 1 121 5.4E-32 T 01-11-2018 CDA09_20485 d15ac70195c71e6cb4230095a6a6d09c 232 SMART SM00448 1 112 1.2E-28 T 01-11-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 CDA09_20485 d15ac70195c71e6cb4230095a6a6d09c 232 Pfam PF00486 Transcriptional regulatory protein, C terminal 145 218 1.4E-17 T 01-11-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 CDA09_20485 d15ac70195c71e6cb4230095a6a6d09c 232 Gene3D G3DSA:1.10.10.10 126 224 6.3E-22 T 01-11-2018 IPR036388 Winged helix-like DNA-binding domain superfamily CDA09_02510 dab36c804f59cd44805b04e3c18658c0 241 Pfam PF03641 Possible lysine decarboxylase 89 219 1.1E-32 T 01-11-2018 IPR031100 LOG family CDA09_02510 dab36c804f59cd44805b04e3c18658c0 241 Gene3D G3DSA:3.40.50.450 24 223 2.5E-65 T 01-11-2018 CDA09_02510 dab36c804f59cd44805b04e3c18658c0 241 TIGRFAM TIGR00730 TIGR00730: TIGR00730 family protein 47 219 3.5E-45 T 01-11-2018 IPR005269 Cytokinin riboside 5'-monophosphate phosphoribohydrolase LOG CDA09_02510 dab36c804f59cd44805b04e3c18658c0 241 SUPERFAMILY SSF102405 19 220 1.68E-61 T 01-11-2018 CDA09_10625 7cc3e7ddad305f99e945b12234c6ec1a 382 Pfam PF04143 Sulphur transport 58 372 5.3E-60 T 01-11-2018 IPR007272 Sulphur transport domain CDA09_16060 138910df1f714591982deabb1ae5eee2 159 Pfam PF05099 Tellurite resistance protein TerB 18 144 1.2E-31 T 01-11-2018 IPR007791 Co-chaperone DjlA, N-terminal CDA09_16060 138910df1f714591982deabb1ae5eee2 159 SUPERFAMILY SSF158682 24 149 1.1E-23 T 01-11-2018 IPR029024 TerB-like CDA09_16060 138910df1f714591982deabb1ae5eee2 159 Gene3D G3DSA:1.10.3680.10 4 141 2.9E-16 T 01-11-2018 IPR029024 TerB-like CDA09_03955 e282bf3867fa3eb57144b2c4797dccbb 366 Hamap MF_00569 Quinolinate synthase A [nadA]. 15 365 48.265 T 01-11-2018 IPR023515 Quinolinate synthase A, type 3 GO:0016765 MetaCyc: PWY-5316|MetaCyc: PWY-7342 CDA09_03955 e282bf3867fa3eb57144b2c4797dccbb 366 Gene3D G3DSA:3.40.50.10800 32 346 5.9E-78 T 01-11-2018 CDA09_03955 e282bf3867fa3eb57144b2c4797dccbb 366 TIGRFAM TIGR00550 nadA: quinolinate synthetase complex, A subunit 16 366 1.4E-90 T 01-11-2018 IPR003473 Quinolinate synthetase A GO:0008987|GO:0009435|GO:0051539 MetaCyc: PWY-5316|MetaCyc: PWY-7342 CDA09_03955 e282bf3867fa3eb57144b2c4797dccbb 366 Pfam PF02445 Quinolinate synthetase A protein 22 364 1.9E-101 T 01-11-2018 IPR003473 Quinolinate synthetase A GO:0008987|GO:0009435|GO:0051539 MetaCyc: PWY-5316|MetaCyc: PWY-7342 CDA09_03955 e282bf3867fa3eb57144b2c4797dccbb 366 SUPERFAMILY SSF142754 25 364 1.96E-92 T 01-11-2018 IPR036094 Quinolinate synthetase A superfamily GO:0008987|GO:0009435|GO:0051539 MetaCyc: PWY-5316|MetaCyc: PWY-7342 CDA09_03955 e282bf3867fa3eb57144b2c4797dccbb 366 Gene3D G3DSA:3.40.50.10800 104 363 5.9E-78 T 01-11-2018 CDA09_03955 e282bf3867fa3eb57144b2c4797dccbb 366 Gene3D G3DSA:3.40.50.10800 226 316 5.9E-78 T 01-11-2018 CDA09_04145 0d50fb68e3d8b9b0966069e6525d62c6 445 TIGRFAM TIGR01574 miaB-methiolase: tRNA-i(6)A37 thiotransferase enzyme MiaB 3 441 2.6E-178 T 01-11-2018 CDA09_04145 0d50fb68e3d8b9b0966069e6525d62c6 445 SUPERFAMILY SSF102114 127 372 1.24E-59 T 01-11-2018 CDA09_04145 0d50fb68e3d8b9b0966069e6525d62c6 445 Gene3D G3DSA:3.80.30.20 144 381 3.0E-81 T 01-11-2018 IPR023404 Radical SAM, alpha/beta horseshoe CDA09_04145 0d50fb68e3d8b9b0966069e6525d62c6 445 Pfam PF00919 Uncharacterized protein family UPF0004 3 103 6.5E-28 T 01-11-2018 IPR013848 Methylthiotransferase, N-terminal GO:0051539 CDA09_04145 0d50fb68e3d8b9b0966069e6525d62c6 445 TIGRFAM TIGR00089 TIGR00089: radical SAM methylthiotransferase, MiaB/RimO family 3 438 2.5E-145 T 01-11-2018 IPR005839 Methylthiotransferase GO:0006400|GO:0016740|GO:0051539 CDA09_04145 0d50fb68e3d8b9b0966069e6525d62c6 445 Hamap MF_01864 tRNA-2-methylthio-N(6)-dimethylallyladenosine synthase [miaB]. 2 442 72.772 T 01-11-2018 IPR006463 tRNA-2-methylthio-N(6)-dimethylallyladenosine synthase MiaB GO:0005737|GO:0006400|GO:0016740|GO:0051539 CDA09_04145 0d50fb68e3d8b9b0966069e6525d62c6 445 Pfam PF01938 TRAM domain 379 441 2.4E-16 T 01-11-2018 IPR002792 TRAM domain CDA09_04145 0d50fb68e3d8b9b0966069e6525d62c6 445 Gene3D G3DSA:3.40.50.12160 2 135 2.0E-31 T 01-11-2018 IPR038135 Methylthiotransferase, N-terminal domain superfamily CDA09_04145 0d50fb68e3d8b9b0966069e6525d62c6 445 ProSitePatterns PS01278 Methylthiotransferase radical SAM domain signature. 150 170 - T 01-11-2018 IPR020612 Methylthiotransferase, conserved site GO:0051539 CDA09_04145 0d50fb68e3d8b9b0966069e6525d62c6 445 Pfam PF04055 Radical SAM superfamily 150 326 5.5E-30 T 01-11-2018 IPR007197 Radical SAM GO:0003824|GO:0051536 CDA09_04145 0d50fb68e3d8b9b0966069e6525d62c6 445 SMART SM00729 146 365 5.9E-61 T 01-11-2018 IPR006638 Elp3/MiaB/NifB GO:0003824|GO:0051536 CDA09_11130 f783fe2d9d5792b5cd7da8ac42b663a4 342 Pfam PF02219 Methylenetetrahydrofolate reductase 25 319 1.8E-33 T 01-11-2018 IPR003171 Methylenetetrahydrofolate reductase GO:0004489|GO:0006555|GO:0055114 KEGG: 00670+1.5.1.20|KEGG: 00720+1.5.1.20|MetaCyc: PWY-2201|MetaCyc: PWY-3841|Reactome: R-HSA-196757 CDA09_11130 f783fe2d9d5792b5cd7da8ac42b663a4 342 Gene3D G3DSA:3.20.20.220 26 322 7.5E-51 T 01-11-2018 CDA09_11130 f783fe2d9d5792b5cd7da8ac42b663a4 342 SUPERFAMILY SSF51730 25 320 3.92E-67 T 01-11-2018 IPR029041 FAD-linked oxidoreductase-like CDA09_08485 00c967ea9c87582af88596e1c835126f 218 SUPERFAMILY SSF52833 1 107 1.57E-22 T 01-11-2018 IPR036249 Thioredoxin-like superfamily CDA09_08485 00c967ea9c87582af88596e1c835126f 218 Gene3D G3DSA:1.20.1050.10 92 218 6.8E-51 T 01-11-2018 CDA09_08485 00c967ea9c87582af88596e1c835126f 218 SUPERFAMILY SSF47616 85 216 9.88E-30 T 01-11-2018 IPR036282 Glutathione S-transferase, C-terminal domain superfamily CDA09_08485 00c967ea9c87582af88596e1c835126f 218 TIGRFAM TIGR01262 maiA: maleylacetoacetate isomerase 2 215 7.3E-86 T 01-11-2018 IPR005955 Glutathione S-transferases, class Zeta GO:0003824|GO:0005737|GO:0009072 Reactome: R-HSA-156590|Reactome: R-HSA-204174|Reactome: R-HSA-71182 CDA09_08485 00c967ea9c87582af88596e1c835126f 218 Pfam PF13417 Glutathione S-transferase, N-terminal domain 3 83 9.4E-15 T 01-11-2018 IPR004045 Glutathione S-transferase, N-terminal GO:0005515 CDA09_08485 00c967ea9c87582af88596e1c835126f 218 Gene3D G3DSA:3.40.30.10 1 91 5.9E-25 T 01-11-2018 CDA09_08485 00c967ea9c87582af88596e1c835126f 218 Pfam PF13410 Glutathione S-transferase, C-terminal domain 138 193 1.6E-6 T 01-11-2018 CDA09_01330 3465c40b1b50a3419d3eed7c93cd015e 423 Gene3D G3DSA:1.25.40.10 133 193 8.9E-6 T 01-11-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 CDA09_01330 3465c40b1b50a3419d3eed7c93cd015e 423 Gene3D G3DSA:1.25.40.10 194 281 2.2E-20 T 01-11-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 CDA09_01330 3465c40b1b50a3419d3eed7c93cd015e 423 TIGRFAM TIGR03142 cytochro_ccmI: cytochrome c-type biogenesis protein CcmI 4 121 7.9E-24 T 01-11-2018 IPR017560 Cytochrome c-type biogenesis protein CcmI CDA09_01330 3465c40b1b50a3419d3eed7c93cd015e 423 SUPERFAMILY SSF48452 154 295 6.84E-13 T 01-11-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 CDA09_04600 901b44f35a12ac9468e9c740387eb97f 738 Pfam PF01103 Surface antigen 558 651 1.1E-4 T 01-11-2018 IPR000184 Bacterial surface antigen (D15) GO:0019867 Reactome: R-HSA-1268020|Reactome: R-HSA-8949613 CDA09_04600 901b44f35a12ac9468e9c740387eb97f 738 Gene3D G3DSA:3.10.20.310 338 409 1.1E-7 T 01-11-2018 CDA09_04600 901b44f35a12ac9468e9c740387eb97f 738 SUPERFAMILY SSF52151 34 282 5.23E-49 T 01-11-2018 IPR016035 Acyl transferase/acyl hydrolase/lysophospholipase CDA09_04600 901b44f35a12ac9468e9c740387eb97f 738 Gene3D G3DSA:3.40.1090.10 19 144 3.4E-26 T 01-11-2018 CDA09_04600 901b44f35a12ac9468e9c740387eb97f 738 Gene3D G3DSA:3.40.1090.10 145 286 3.6E-19 T 01-11-2018 CDA09_04600 901b44f35a12ac9468e9c740387eb97f 738 Gene3D G3DSA:2.40.160.50 433 692 6.6E-8 T 01-11-2018 CDA09_04600 901b44f35a12ac9468e9c740387eb97f 738 Pfam PF01734 Patatin-like phospholipase 36 225 1.6E-27 T 01-11-2018 IPR002641 Patatin-like phospholipase domain GO:0006629 CDA09_17760 41c09837c55cee92df34eff8525577a0 423 Pfam PF13609 Gram-negative porin 7 389 5.3E-50 T 01-11-2018 CDA09_17760 41c09837c55cee92df34eff8525577a0 423 Gene3D G3DSA:2.40.160.10 11 423 2.4E-78 T 01-11-2018 IPR023614 Porin domain superfamily CDA09_17760 41c09837c55cee92df34eff8525577a0 423 PRINTS PR00184 Neisseria sp. porin signature 361 385 1.3E-13 T 01-11-2018 IPR002299 Porin, Neisseria sp. type GO:0015288|GO:0016020|GO:0055085 CDA09_17760 41c09837c55cee92df34eff8525577a0 423 PRINTS PR00184 Neisseria sp. porin signature 74 99 1.3E-13 T 01-11-2018 IPR002299 Porin, Neisseria sp. type GO:0015288|GO:0016020|GO:0055085 CDA09_17760 41c09837c55cee92df34eff8525577a0 423 PRINTS PR00184 Neisseria sp. porin signature 111 130 1.3E-13 T 01-11-2018 IPR002299 Porin, Neisseria sp. type GO:0015288|GO:0016020|GO:0055085 CDA09_17760 41c09837c55cee92df34eff8525577a0 423 SUPERFAMILY SSF56935 21 423 6.8E-59 T 01-11-2018 CDA09_17760 41c09837c55cee92df34eff8525577a0 423 PRINTS PR00182 E.coli/Neisseria porin superfamily signature 72 83 1.6E-6 T 01-11-2018 IPR001702 Porin, Gram-negative type GO:0015288|GO:0016020|GO:0055085 CDA09_17760 41c09837c55cee92df34eff8525577a0 423 PRINTS PR00182 E.coli/Neisseria porin superfamily signature 317 334 1.6E-6 T 01-11-2018 IPR001702 Porin, Gram-negative type GO:0015288|GO:0016020|GO:0055085 CDA09_17760 41c09837c55cee92df34eff8525577a0 423 PRINTS PR00182 E.coli/Neisseria porin superfamily signature 113 123 1.6E-6 T 01-11-2018 IPR001702 Porin, Gram-negative type GO:0015288|GO:0016020|GO:0055085 CDA09_17760 41c09837c55cee92df34eff8525577a0 423 PRINTS PR00182 E.coli/Neisseria porin superfamily signature 212 224 1.6E-6 T 01-11-2018 IPR001702 Porin, Gram-negative type GO:0015288|GO:0016020|GO:0055085 CDA09_16755 583b79bc933331c812a6ef9370acaa23 352 SUPERFAMILY SSF160443 262 345 4.84E-17 T 01-11-2018 IPR036063 Smr domain superfamily CDA09_16755 583b79bc933331c812a6ef9370acaa23 352 Gene3D G3DSA:3.30.1370.110 217 349 2.4E-41 T 01-11-2018 CDA09_16755 583b79bc933331c812a6ef9370acaa23 352 Pfam PF01713 Smr domain 264 345 1.2E-22 T 01-11-2018 IPR002625 Smr domain CDA09_16755 583b79bc933331c812a6ef9370acaa23 352 SMART SM00463 261 345 7.0E-11 T 01-11-2018 IPR002625 Smr domain CDA09_04800 a5966ae01a063a3cde9b9d695211ab4b 96 SUPERFAMILY SSF50129 1 95 3.2E-35 T 01-11-2018 IPR011032 GroES-like superfamily CDA09_04800 a5966ae01a063a3cde9b9d695211ab4b 96 Pfam PF00166 Chaperonin 10 Kd subunit 2 94 4.1E-36 T 01-11-2018 IPR020818 GroES chaperonin family GO:0005737|GO:0006457 CDA09_04800 a5966ae01a063a3cde9b9d695211ab4b 96 PRINTS PR00297 10kDa chaperonin signature 25 46 4.6E-34 T 01-11-2018 IPR020818 GroES chaperonin family GO:0005737|GO:0006457 CDA09_04800 a5966ae01a063a3cde9b9d695211ab4b 96 PRINTS PR00297 10kDa chaperonin signature 81 94 4.6E-34 T 01-11-2018 IPR020818 GroES chaperonin family GO:0005737|GO:0006457 CDA09_04800 a5966ae01a063a3cde9b9d695211ab4b 96 PRINTS PR00297 10kDa chaperonin signature 3 18 4.6E-34 T 01-11-2018 IPR020818 GroES chaperonin family GO:0005737|GO:0006457 CDA09_04800 a5966ae01a063a3cde9b9d695211ab4b 96 PRINTS PR00297 10kDa chaperonin signature 60 72 4.6E-34 T 01-11-2018 IPR020818 GroES chaperonin family GO:0005737|GO:0006457 CDA09_04800 a5966ae01a063a3cde9b9d695211ab4b 96 ProSitePatterns PS00681 Chaperonins cpn10 signature. 3 27 - T 01-11-2018 IPR018369 Chaperonin GroES, conserved site GO:0005524|GO:0006457 CDA09_04800 a5966ae01a063a3cde9b9d695211ab4b 96 Hamap MF_00580 10 kDa chaperonin [groS]. 2 95 27.297 T 01-11-2018 IPR020818 GroES chaperonin family GO:0005737|GO:0006457 CDA09_04800 a5966ae01a063a3cde9b9d695211ab4b 96 Gene3D G3DSA:2.30.33.40 1 96 1.8E-39 T 01-11-2018 IPR037124 GroES chaperonin superfamily GO:0005737|GO:0006457 CDA09_04800 a5966ae01a063a3cde9b9d695211ab4b 96 SMART SM00883 2 94 4.6E-59 T 01-11-2018 IPR020818 GroES chaperonin family GO:0005737|GO:0006457 CDA09_02880 e7e9f3d06c304dad662f576a61717823 681 Pfam PF10136 Site-specific recombinase 16 660 4.4E-231 T 01-11-2018 IPR011385 Putative site-specific recombinase Gcr CDA09_02880 e7e9f3d06c304dad662f576a61717823 681 PIRSF PIRSF015380 8 674 3.4E-167 T 01-11-2018 IPR011385 Putative site-specific recombinase Gcr CDA09_17685 d9a3ea0ec6e6b6b25328d90d41ca12e3 283 Pfam PF01478 Type IV leader peptidase family 132 241 2.5E-26 T 01-11-2018 IPR000045 Prepilin type IV endopeptidase, peptidase domain GO:0004190|GO:0016020 CDA09_17685 d9a3ea0ec6e6b6b25328d90d41ca12e3 283 Pfam PF06750 Bacterial Peptidase A24 N-terminal domain 17 122 8.9E-35 T 01-11-2018 IPR010627 Peptidase A24A, N-terminal CDA09_17685 d9a3ea0ec6e6b6b25328d90d41ca12e3 283 PRINTS PR00864 Type IV prepilin cysteine protease (C20) family signature 209 220 6.6E-29 T 01-11-2018 IPR014032 Peptidase A24A, prepilin type IV, bacterial CDA09_17685 d9a3ea0ec6e6b6b25328d90d41ca12e3 283 PRINTS PR00864 Type IV prepilin cysteine protease (C20) family signature 221 236 6.6E-29 T 01-11-2018 IPR014032 Peptidase A24A, prepilin type IV, bacterial CDA09_17685 d9a3ea0ec6e6b6b25328d90d41ca12e3 283 PRINTS PR00864 Type IV prepilin cysteine protease (C20) family signature 141 158 6.6E-29 T 01-11-2018 IPR014032 Peptidase A24A, prepilin type IV, bacterial CDA09_17685 d9a3ea0ec6e6b6b25328d90d41ca12e3 283 PRINTS PR00864 Type IV prepilin cysteine protease (C20) family signature 198 208 6.6E-29 T 01-11-2018 IPR014032 Peptidase A24A, prepilin type IV, bacterial CDA09_18880 5e07537b55de3cb2aea5ff5094b30e61 268 Pfam PF01925 Sulfite exporter TauE/SafE 11 262 2.0E-48 T 01-11-2018 IPR002781 Transmembrane protein TauE-like GO:0016021 CDA09_00590 fe69a84e26e62d0dd031b9922f30ff8d 380 ProSitePatterns PS00428 Cell cycle proteins ftsW / rodA / spoVE signature. 333 357 - T 01-11-2018 IPR018365 Cell cycle, FtsW / RodA / SpoVE, conserved site GO:0016021 KEGG: 00550+2.4.1.129|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471 CDA09_00590 fe69a84e26e62d0dd031b9922f30ff8d 380 TIGRFAM TIGR02210 rodA_shape: rod shape-determining protein RodA 20 375 1.6E-123 T 01-11-2018 IPR011923 Probable peptidoglycan glycosyltransferase RodA/MrdB GO:0008360|GO:0016021 KEGG: 00550+2.4.1.129|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471 CDA09_00590 fe69a84e26e62d0dd031b9922f30ff8d 380 Pfam PF01098 Cell cycle protein 23 374 2.7E-100 T 01-11-2018 IPR001182 Probable peptidoglycan glycosyltransferase FtsW/RodA GO:0016021|GO:0051301 KEGG: 00550+2.4.1.129|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471 CDA09_00590 fe69a84e26e62d0dd031b9922f30ff8d 380 Hamap MF_02079 Peptidoglycan glycosyltransferase MrdB [mrdB]. 14 377 25.865 T 01-11-2018 IPR011923 Probable peptidoglycan glycosyltransferase RodA/MrdB GO:0008360|GO:0016021 KEGG: 00550+2.4.1.129|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471 CDA09_04735 c0098aa273762f3e364053b77fb79924 225 SUPERFAMILY SSF53254 2 219 2.36E-32 T 01-11-2018 IPR029033 Histidine phosphatase superfamily CDA09_04735 c0098aa273762f3e364053b77fb79924 225 Pfam PF00300 Histidine phosphatase superfamily (branch 1) 108 212 8.4E-10 T 01-11-2018 IPR013078 Histidine phosphatase superfamily, clade-1 CDA09_04735 c0098aa273762f3e364053b77fb79924 225 Pfam PF00300 Histidine phosphatase superfamily (branch 1) 4 84 3.4E-9 T 01-11-2018 IPR013078 Histidine phosphatase superfamily, clade-1 CDA09_04735 c0098aa273762f3e364053b77fb79924 225 Gene3D G3DSA:3.40.50.1240 2 223 2.6E-32 T 01-11-2018 IPR029033 Histidine phosphatase superfamily CDA09_04735 c0098aa273762f3e364053b77fb79924 225 SMART SM00855 3 172 1.6E-8 T 01-11-2018 IPR013078 Histidine phosphatase superfamily, clade-1 CDA09_11070 c92aaa9d76f03418eb02e87e4184ca13 296 Pfam PF00701 Dihydrodipicolinate synthetase family 3 287 2.8E-63 T 01-11-2018 IPR002220 DapA-like GO:0016829 CDA09_11070 c92aaa9d76f03418eb02e87e4184ca13 296 PRINTS PR00146 Dihydrodipicolinate synthase signature 36 57 1.8E-22 T 01-11-2018 IPR002220 DapA-like GO:0016829 CDA09_11070 c92aaa9d76f03418eb02e87e4184ca13 296 PRINTS PR00146 Dihydrodipicolinate synthase signature 72 90 1.8E-22 T 01-11-2018 IPR002220 DapA-like GO:0016829 CDA09_11070 c92aaa9d76f03418eb02e87e4184ca13 296 PRINTS PR00146 Dihydrodipicolinate synthase signature 104 120 1.8E-22 T 01-11-2018 IPR002220 DapA-like GO:0016829 CDA09_11070 c92aaa9d76f03418eb02e87e4184ca13 296 PRINTS PR00146 Dihydrodipicolinate synthase signature 129 146 1.8E-22 T 01-11-2018 IPR002220 DapA-like GO:0016829 CDA09_11070 c92aaa9d76f03418eb02e87e4184ca13 296 SMART SM01130 2 292 4.6E-90 T 01-11-2018 IPR002220 DapA-like GO:0016829 CDA09_11070 c92aaa9d76f03418eb02e87e4184ca13 296 SUPERFAMILY SSF51569 1 289 7.85E-84 T 01-11-2018 CDA09_11070 c92aaa9d76f03418eb02e87e4184ca13 296 PIRSF PIRSF001365 1 296 6.7E-81 T 01-11-2018 IPR002220 DapA-like GO:0016829 CDA09_11070 c92aaa9d76f03418eb02e87e4184ca13 296 Gene3D G3DSA:3.20.20.70 1 295 7.6E-87 T 01-11-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 CDA09_11070 c92aaa9d76f03418eb02e87e4184ca13 296 ProSitePatterns PS00666 Dihydrodipicolinate synthase signature 2. 134 164 - T 01-11-2018 IPR020625 Schiff base-forming aldolase, active site GO:0016829 KEGG: 00261+4.3.3.7|KEGG: 00300+4.3.3.7|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|Reactome: R-HSA-389661 CDA09_03375 3aa49e4abf7d4389b3114078bc9d101d 525 SUPERFAMILY SSF51905 28 350 6.71E-38 T 01-11-2018 IPR036188 FAD/NAD(P)-binding domain superfamily CDA09_03375 3aa49e4abf7d4389b3114078bc9d101d 525 ProSitePatterns PS00978 FAD-dependent glycerol-3-phosphate dehydrogenase signature 2. 378 388 - T 01-11-2018 IPR000447 FAD-dependent glycerol-3-phosphate dehydrogenase GO:0004368|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.5.3|MetaCyc: PWY-4261|MetaCyc: PWY-6118|MetaCyc: PWY-6952|Reactome: R-HSA-1483166|Reactome: R-HSA-163560 CDA09_03375 3aa49e4abf7d4389b3114078bc9d101d 525 Pfam PF16901 C-terminal domain of alpha-glycerophosphate oxidase 429 503 2.4E-16 T 01-11-2018 IPR031656 Alpha-glycerophosphate oxidase, C-terminal KEGG: 00564+1.1.5.3|MetaCyc: PWY-4261|MetaCyc: PWY-6118|MetaCyc: PWY-6952|Reactome: R-HSA-1483166|Reactome: R-HSA-163560 CDA09_03375 3aa49e4abf7d4389b3114078bc9d101d 525 Pfam PF01266 FAD dependent oxidoreductase 29 383 2.4E-49 T 01-11-2018 IPR006076 FAD dependent oxidoreductase GO:0016491|GO:0055114 CDA09_03375 3aa49e4abf7d4389b3114078bc9d101d 525 PRINTS PR01001 FAD-dependent glycerol-3-phosphate dehydrogenase family signature 28 40 2.6E-27 T 01-11-2018 IPR000447 FAD-dependent glycerol-3-phosphate dehydrogenase GO:0004368|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.5.3|MetaCyc: PWY-4261|MetaCyc: PWY-6118|MetaCyc: PWY-6952|Reactome: R-HSA-1483166|Reactome: R-HSA-163560 CDA09_03375 3aa49e4abf7d4389b3114078bc9d101d 525 PRINTS PR01001 FAD-dependent glycerol-3-phosphate dehydrogenase family signature 102 114 2.6E-27 T 01-11-2018 IPR000447 FAD-dependent glycerol-3-phosphate dehydrogenase GO:0004368|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.5.3|MetaCyc: PWY-4261|MetaCyc: PWY-6118|MetaCyc: PWY-6952|Reactome: R-HSA-1483166|Reactome: R-HSA-163560 CDA09_03375 3aa49e4abf7d4389b3114078bc9d101d 525 PRINTS PR01001 FAD-dependent glycerol-3-phosphate dehydrogenase family signature 57 69 2.6E-27 T 01-11-2018 IPR000447 FAD-dependent glycerol-3-phosphate dehydrogenase GO:0004368|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.5.3|MetaCyc: PWY-4261|MetaCyc: PWY-6118|MetaCyc: PWY-6952|Reactome: R-HSA-1483166|Reactome: R-HSA-163560 CDA09_03375 3aa49e4abf7d4389b3114078bc9d101d 525 PRINTS PR01001 FAD-dependent glycerol-3-phosphate dehydrogenase family signature 41 51 2.6E-27 T 01-11-2018 IPR000447 FAD-dependent glycerol-3-phosphate dehydrogenase GO:0004368|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.5.3|MetaCyc: PWY-4261|MetaCyc: PWY-6118|MetaCyc: PWY-6952|Reactome: R-HSA-1483166|Reactome: R-HSA-163560 CDA09_03375 3aa49e4abf7d4389b3114078bc9d101d 525 PRINTS PR01001 FAD-dependent glycerol-3-phosphate dehydrogenase family signature 373 385 2.6E-27 T 01-11-2018 IPR000447 FAD-dependent glycerol-3-phosphate dehydrogenase GO:0004368|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.5.3|MetaCyc: PWY-4261|MetaCyc: PWY-6118|MetaCyc: PWY-6952|Reactome: R-HSA-1483166|Reactome: R-HSA-163560 CDA09_03375 3aa49e4abf7d4389b3114078bc9d101d 525 PRINTS PR01001 FAD-dependent glycerol-3-phosphate dehydrogenase family signature 342 348 2.6E-27 T 01-11-2018 IPR000447 FAD-dependent glycerol-3-phosphate dehydrogenase GO:0004368|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.5.3|MetaCyc: PWY-4261|MetaCyc: PWY-6118|MetaCyc: PWY-6952|Reactome: R-HSA-1483166|Reactome: R-HSA-163560 CDA09_03375 3aa49e4abf7d4389b3114078bc9d101d 525 Gene3D G3DSA:3.30.9.10 106 349 2.3E-124 T 01-11-2018 CDA09_03375 3aa49e4abf7d4389b3114078bc9d101d 525 Gene3D G3DSA:1.10.8.870 420 524 4.3E-20 T 01-11-2018 IPR038299 Alpha-glycerophosphate oxidase, C-terminal domain superfamily KEGG: 00564+1.1.5.3|MetaCyc: PWY-4261|MetaCyc: PWY-6118|MetaCyc: PWY-6952|Reactome: R-HSA-1483166|Reactome: R-HSA-163560 CDA09_03375 3aa49e4abf7d4389b3114078bc9d101d 525 Gene3D G3DSA:3.50.50.60 29 392 2.3E-124 T 01-11-2018 IPR036188 FAD/NAD(P)-binding domain superfamily CDA09_05750 6b3bd9360bc8db56f6348b2a42afd198 358 SUPERFAMILY SSF51569 1 356 7.45E-72 T 01-11-2018 CDA09_05750 6b3bd9360bc8db56f6348b2a42afd198 358 Pfam PF00923 Transaldolase/Fructose-6-phosphate aldolase 14 355 4.8E-78 T 01-11-2018 IPR001585 Transaldolase/Fructose-6-phosphate aldolase GO:0005975 KEGG: 00030+2.2.1.2|MetaCyc: PWY-1861|MetaCyc: PWY-5723|Reactome: R-HSA-163754|Reactome: R-HSA-6791055|Reactome: R-HSA-6791462|Reactome: R-HSA-71336|Reactome: R-HSA-8950505 CDA09_05750 6b3bd9360bc8db56f6348b2a42afd198 358 Gene3D G3DSA:3.20.20.70 1 357 2.6E-142 T 01-11-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 CDA09_05750 6b3bd9360bc8db56f6348b2a42afd198 358 PIRSF PIRSF036915 1 358 1.1E-138 T 01-11-2018 IPR004732 Transaldolase type 2 GO:0004801|GO:0005737|GO:0006098 KEGG: 00030+2.2.1.2|MetaCyc: PWY-1861|MetaCyc: PWY-5723 CDA09_05750 6b3bd9360bc8db56f6348b2a42afd198 358 TIGRFAM TIGR00876 tal_mycobact: transaldolase 13 355 6.9E-99 T 01-11-2018 IPR004732 Transaldolase type 2 GO:0004801|GO:0005737|GO:0006098 KEGG: 00030+2.2.1.2|MetaCyc: PWY-1861|MetaCyc: PWY-5723 CDA09_05750 6b3bd9360bc8db56f6348b2a42afd198 358 ProSitePatterns PS00958 Transaldolase active site. 136 153 - T 01-11-2018 IPR018225 Transaldolase, active site GO:0005975 KEGG: 00030+2.2.1.2|MetaCyc: PWY-1861|MetaCyc: PWY-5723|Reactome: R-HSA-163754|Reactome: R-HSA-6791055|Reactome: R-HSA-6791462|Reactome: R-HSA-71336|Reactome: R-HSA-8950505 CDA09_05750 6b3bd9360bc8db56f6348b2a42afd198 358 ProSitePatterns PS01054 Transaldolase signature 1. 40 48 - T 01-11-2018 IPR018225 Transaldolase, active site GO:0005975 KEGG: 00030+2.2.1.2|MetaCyc: PWY-1861|MetaCyc: PWY-5723|Reactome: R-HSA-163754|Reactome: R-HSA-6791055|Reactome: R-HSA-6791462|Reactome: R-HSA-71336|Reactome: R-HSA-8950505 CDA09_05750 6b3bd9360bc8db56f6348b2a42afd198 358 Hamap MF_00493 Transaldolase [tal]. 1 358 131.872 T 01-11-2018 IPR004732 Transaldolase type 2 GO:0004801|GO:0005737|GO:0006098 KEGG: 00030+2.2.1.2|MetaCyc: PWY-1861|MetaCyc: PWY-5723 CDA09_21075 df97f60dd447cdebcd07773d999cf5e6 259 SMART SM00646 101 244 4.1E-4 T 01-11-2018 IPR002508 N-acetylmuramoyl-L-alanine amidase, catalytic domain GO:0008745|GO:0009253 CDA09_21075 df97f60dd447cdebcd07773d999cf5e6 259 SUPERFAMILY SSF53187 42 246 1.76E-25 T 01-11-2018 CDA09_21075 df97f60dd447cdebcd07773d999cf5e6 259 Gene3D G3DSA:3.40.630.40 42 250 3.3E-26 T 01-11-2018 CDA09_21075 df97f60dd447cdebcd07773d999cf5e6 259 Pfam PF01520 N-acetylmuramoyl-L-alanine amidase 44 244 2.1E-26 T 01-11-2018 IPR002508 N-acetylmuramoyl-L-alanine amidase, catalytic domain GO:0008745|GO:0009253 CDA09_03680 d55f2791843e6d0e9972b1525c404129 148 Gene3D G3DSA:1.10.10.410 91 147 1.0E-16 T 01-11-2018 IPR023168 Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit B, C-terminal CDA09_03680 d55f2791843e6d0e9972b1525c404129 148 SUPERFAMILY SSF89095 1 147 6.28E-38 T 01-11-2018 IPR003789 Aspartyl/glutamyl-tRNA amidotransferase subunit B-like GO:0016884 CDA09_03680 d55f2791843e6d0e9972b1525c404129 148 Pfam PF09424 Yqey-like protein 4 146 1.2E-49 T 01-11-2018 IPR019004 Uncharacterised protein YqeY/AIM41 CDA09_03680 d55f2791843e6d0e9972b1525c404129 148 Gene3D G3DSA:1.10.1510.10 1 90 3.7E-27 T 01-11-2018 CDA09_17255 4739d6992c36ccaefe0eb017757ca0e8 167 Pfam PF14280 Domain of unknown function (DUF4365) 9 160 1.5E-19 T 01-11-2018 IPR025375 Domain of unknown function DUF4365 CDA09_15495 58c086913512ce8f48306776b2518a15 190 TIGRFAM TIGR02175 PorC_KorC: 2-oxoacid:acceptor oxidoreductase, gamma subunit, pyruvate/2-ketoisovalerate family 1 180 1.8E-69 T 01-11-2018 IPR011894 2-oxoacid:acceptor oxidoreductase, gamma subunit, pyruvate/2-ketoisovalerate GO:0016625|GO:0055114 CDA09_15495 58c086913512ce8f48306776b2518a15 190 Pfam PF01558 Pyruvate ferredoxin/flavodoxin oxidoreductase 10 176 1.2E-29 T 01-11-2018 IPR019752 Pyruvate/ketoisovalerate oxidoreductase, catalytic domain GO:0016903|GO:0055114 CDA09_15495 58c086913512ce8f48306776b2518a15 190 SUPERFAMILY SSF53323 1 181 7.59E-46 T 01-11-2018 IPR002869 Pyruvate-flavodoxin oxidoreductase, central domain GO:0016491|GO:0055114 CDA09_15495 58c086913512ce8f48306776b2518a15 190 Gene3D G3DSA:3.40.920.10 1 182 8.6E-53 T 01-11-2018 IPR002869 Pyruvate-flavodoxin oxidoreductase, central domain GO:0016491|GO:0055114 CDA09_21040 9ea65170b57b80ce8d15931722a65c1c 413 TIGRFAM TIGR01869 casC_Cse4: CRISPR-associated protein Cas7/Cse4/CasC, subtype I-E/ECOLI 4 371 2.9E-86 T 01-11-2018 IPR010148 CRISPR-associated protein, CT1975 CDA09_21040 9ea65170b57b80ce8d15931722a65c1c 413 Pfam PF09344 CT1975-like protein 6 405 4.1E-94 T 01-11-2018 IPR010148 CRISPR-associated protein, CT1975 CDA09_11500 ab1a798d3b3020d7909fa300414ab083 315 Gene3D G3DSA:3.60.15.10 17 257 1.0E-36 T 01-11-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like CDA09_11500 ab1a798d3b3020d7909fa300414ab083 315 SUPERFAMILY SSF56281 8 288 1.54E-46 T 01-11-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like CDA09_11500 ab1a798d3b3020d7909fa300414ab083 315 SMART SM00849 50 235 9.2E-8 T 01-11-2018 IPR001279 Metallo-beta-lactamase CDA09_08890 148e37032fad5f4309478b1d5a370cfd 198 Pfam PF00510 Cytochrome c oxidase subunit III 23 196 7.9E-14 T 01-11-2018 IPR000298 Cytochrome c oxidase subunit III-like GO:0015002|GO:0016020 Reactome: R-HSA-5628897|Reactome: R-HSA-611105 CDA09_08890 148e37032fad5f4309478b1d5a370cfd 198 SUPERFAMILY SSF81452 16 197 8.63E-50 T 01-11-2018 IPR035973 Cytochrome c oxidase subunit III-like superfamily GO:0015002|GO:0016020 Reactome: R-HSA-5628897|Reactome: R-HSA-611105 CDA09_08890 148e37032fad5f4309478b1d5a370cfd 198 Gene3D G3DSA:1.20.120.80 19 198 3.7E-50 T 01-11-2018 IPR013833 Cytochrome c oxidase, subunit III, 4-helical bundle GO:0004129|GO:0016020|GO:0022904 Reactome: R-HSA-5628897|Reactome: R-HSA-611105 CDA09_07495 f3c0896847e03a8447d872f280688762 307 Pfam PF13228 Domain of unknown function (DUF4037) 125 224 7.3E-36 T 01-11-2018 IPR025117 Domain of unknown function DUF4037 CDA09_13885 b12782b13058fc170c97340e2f222f6f 118 SUPERFAMILY SSF54427 8 110 3.67E-7 T 01-11-2018 IPR032710 NTF2-like domain superfamily CDA09_13885 b12782b13058fc170c97340e2f222f6f 118 Gene3D G3DSA:3.10.450.50 3 115 2.5E-8 T 01-11-2018 CDA09_05105 10e052bfeb368cfaafba96e8793a52a8 429 Pfam PF11902 Protein of unknown function (DUF3422) 6 421 4.1E-161 T 01-11-2018 IPR021830 Protein of unknown function DUF3422 CDA09_15610 ceffe2f98ca9b261961a94bd2f245fc3 340 Pfam PF01548 Transposase 6 146 6.0E-12 T 01-11-2018 IPR002525 Transposase, IS111A/IS1328/IS1533, N-terminal GO:0003677|GO:0004803|GO:0006313 CDA09_15610 ceffe2f98ca9b261961a94bd2f245fc3 340 Pfam PF02371 Transposase IS116/IS110/IS902 family 212 286 2.2E-25 T 01-11-2018 IPR003346 Transposase, IS116/IS110/IS902 GO:0003677|GO:0004803|GO:0006313 CDA09_13475 ceffe2f98ca9b261961a94bd2f245fc3 340 Pfam PF01548 Transposase 6 146 6.0E-12 T 01-11-2018 IPR002525 Transposase, IS111A/IS1328/IS1533, N-terminal GO:0003677|GO:0004803|GO:0006313 CDA09_13475 ceffe2f98ca9b261961a94bd2f245fc3 340 Pfam PF02371 Transposase IS116/IS110/IS902 family 212 286 2.2E-25 T 01-11-2018 IPR003346 Transposase, IS116/IS110/IS902 GO:0003677|GO:0004803|GO:0006313 CDA09_11550 b6c1acaab77e21fafcac8301ff614834 414 Pfam PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain 42 285 7.3E-29 T 01-11-2018 IPR022644 Orn/DAP/Arg decarboxylase 2, N-terminal GO:0003824 CDA09_11550 b6c1acaab77e21fafcac8301ff614834 414 PRINTS PR01179 Ornithine/diaminopimelate/arginine (ODA) decarboxylase family signature 275 294 3.9E-7 T 01-11-2018 IPR000183 Ornithine/DAP/Arg decarboxylase GO:0003824 CDA09_11550 b6c1acaab77e21fafcac8301ff614834 414 PRINTS PR01179 Ornithine/diaminopimelate/arginine (ODA) decarboxylase family signature 81 93 3.9E-7 T 01-11-2018 IPR000183 Ornithine/DAP/Arg decarboxylase GO:0003824 CDA09_11550 b6c1acaab77e21fafcac8301ff614834 414 PRINTS PR01179 Ornithine/diaminopimelate/arginine (ODA) decarboxylase family signature 61 79 3.9E-7 T 01-11-2018 IPR000183 Ornithine/DAP/Arg decarboxylase GO:0003824 CDA09_11550 b6c1acaab77e21fafcac8301ff614834 414 Gene3D G3DSA:3.20.20.10 39 287 1.2E-92 T 01-11-2018 IPR029066 PLP-binding barrel CDA09_11550 b6c1acaab77e21fafcac8301ff614834 414 Pfam PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain 286 379 7.6E-13 T 01-11-2018 IPR022643 Orn/DAP/Arg decarboxylase 2, C-terminal GO:0003824 CDA09_11550 b6c1acaab77e21fafcac8301ff614834 414 SUPERFAMILY SSF50621 264 403 4.19E-33 T 01-11-2018 IPR009006 Alanine racemase/group IV decarboxylase, C-terminal GO:0003824 CDA09_11550 b6c1acaab77e21fafcac8301ff614834 414 SUPERFAMILY SSF51419 31 287 1.02E-57 T 01-11-2018 IPR029066 PLP-binding barrel CDA09_11550 b6c1acaab77e21fafcac8301ff614834 414 Gene3D G3DSA:2.40.37.10 27 403 1.2E-92 T 01-11-2018 IPR009006 Alanine racemase/group IV decarboxylase, C-terminal GO:0003824 CDA09_11550 b6c1acaab77e21fafcac8301ff614834 414 ProSitePatterns PS00879 Orn/DAP/Arg decarboxylases family 2 signature 2. 223 240 - T 01-11-2018 IPR022657 Orn/DAP/Arg decarboxylase 2, conserved site CDA09_14850 742f8e8d3104f1ca935033fff9b20a39 227 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 161 175 5.9E-12 T 01-11-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 CDA09_14850 742f8e8d3104f1ca935033fff9b20a39 227 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 175 191 5.9E-12 T 01-11-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 CDA09_14850 742f8e8d3104f1ca935033fff9b20a39 227 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 191 203 5.9E-12 T 01-11-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 CDA09_14850 742f8e8d3104f1ca935033fff9b20a39 227 Gene3D G3DSA:1.10.10.10 159 219 6.0E-22 T 01-11-2018 IPR036388 Winged helix-like DNA-binding domain superfamily CDA09_14850 742f8e8d3104f1ca935033fff9b20a39 227 Gene3D G3DSA:3.40.50.2300 11 157 1.5E-28 T 01-11-2018 CDA09_14850 742f8e8d3104f1ca935033fff9b20a39 227 ProSitePatterns PS00622 LuxR-type HTH domain signature. 175 202 - T 01-11-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 CDA09_14850 742f8e8d3104f1ca935033fff9b20a39 227 SMART SM00421 158 215 3.4E-22 T 01-11-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 CDA09_14850 742f8e8d3104f1ca935033fff9b20a39 227 Pfam PF00196 Bacterial regulatory proteins, luxR family 160 215 3.9E-20 T 01-11-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 CDA09_14850 742f8e8d3104f1ca935033fff9b20a39 227 SUPERFAMILY SSF46894 143 217 1.22E-19 T 01-11-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 CDA09_22650 8411b0947e00d7b09e6c29ccd82ca2a7 267 Gene3D G3DSA:3.30.420.40 5 262 7.3E-65 T 01-11-2018 CDA09_22650 8411b0947e00d7b09e6c29ccd82ca2a7 267 TIGRFAM TIGR00241 CoA_E_activ: putative CoA-substrate-specific enzyme activase 2 261 9.6E-59 T 01-11-2018 IPR008275 CoA enzyme activase CDA09_22650 8411b0947e00d7b09e6c29ccd82ca2a7 267 Gene3D G3DSA:3.30.420.40 104 247 7.3E-65 T 01-11-2018 CDA09_22650 8411b0947e00d7b09e6c29ccd82ca2a7 267 Pfam PF01869 BadF/BadG/BcrA/BcrD ATPase family 5 262 1.2E-43 T 01-11-2018 IPR002731 ATPase, BadF/BadG/BcrA/BcrD type Reactome: R-HSA-446210 CDA09_22650 8411b0947e00d7b09e6c29ccd82ca2a7 267 SUPERFAMILY SSF53067 1 265 1.9E-30 T 01-11-2018 CDA09_16335 11954e28b483d85c2d863cb59e372091 365 TIGRFAM TIGR00109 hemH: ferrochelatase 16 337 1.5E-93 T 01-11-2018 IPR001015 Ferrochelatase GO:0004325|GO:0006783 KEGG: 00860+4.99.1.1|Reactome: R-HSA-189451 CDA09_16335 11954e28b483d85c2d863cb59e372091 365 ProSitePatterns PS00534 Ferrochelatase signature. 206 224 - T 01-11-2018 IPR019772 Ferrochelatase, active site GO:0004325|GO:0006783 KEGG: 00860+4.99.1.1|Reactome: R-HSA-189451 CDA09_16335 11954e28b483d85c2d863cb59e372091 365 Hamap MF_00323 Ferrochelatase [hemH]. 16 337 38.123 T 01-11-2018 IPR001015 Ferrochelatase GO:0004325|GO:0006783 KEGG: 00860+4.99.1.1|Reactome: R-HSA-189451 CDA09_16335 11954e28b483d85c2d863cb59e372091 365 Gene3D G3DSA:3.40.50.1400 17 337 9.6E-103 T 01-11-2018 CDA09_16335 11954e28b483d85c2d863cb59e372091 365 Gene3D G3DSA:3.40.50.1400 180 318 9.6E-103 T 01-11-2018 CDA09_16335 11954e28b483d85c2d863cb59e372091 365 Pfam PF00762 Ferrochelatase 17 337 2.8E-121 T 01-11-2018 IPR001015 Ferrochelatase GO:0004325|GO:0006783 KEGG: 00860+4.99.1.1|Reactome: R-HSA-189451 CDA09_16335 11954e28b483d85c2d863cb59e372091 365 SUPERFAMILY SSF53800 16 342 1.7E-113 T 01-11-2018 CDA09_04740 2d5ea998665fbfa79bc2e22424949465 229 SMART SM00345 14 72 2.5E-10 T 01-11-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 CDA09_04740 2d5ea998665fbfa79bc2e22424949465 229 Gene3D G3DSA:1.20.120.530 80 219 4.5E-28 T 01-11-2018 IPR008920 Transcription regulator FadR/GntR, C-terminal CDA09_04740 2d5ea998665fbfa79bc2e22424949465 229 SUPERFAMILY SSF46785 8 100 2.9E-16 T 01-11-2018 IPR036390 Winged helix DNA-binding domain superfamily CDA09_04740 2d5ea998665fbfa79bc2e22424949465 229 Pfam PF07729 FCD domain 83 205 2.7E-21 T 01-11-2018 IPR011711 GntR, C-terminal CDA09_04740 2d5ea998665fbfa79bc2e22424949465 229 Gene3D G3DSA:1.10.10.10 2 79 3.4E-17 T 01-11-2018 IPR036388 Winged helix-like DNA-binding domain superfamily CDA09_04740 2d5ea998665fbfa79bc2e22424949465 229 SUPERFAMILY SSF48008 78 213 7.85E-26 T 01-11-2018 IPR008920 Transcription regulator FadR/GntR, C-terminal CDA09_04740 2d5ea998665fbfa79bc2e22424949465 229 Pfam PF00392 Bacterial regulatory proteins, gntR family 11 72 1.6E-12 T 01-11-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 CDA09_04740 2d5ea998665fbfa79bc2e22424949465 229 SMART SM00895 82 206 1.0E-16 T 01-11-2018 IPR011711 GntR, C-terminal CDA09_18810 cab02e609c64acddadd711188b0e5149 102 Gene3D G3DSA:1.10.760.10 21 102 1.9E-33 T 01-11-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 CDA09_18810 cab02e609c64acddadd711188b0e5149 102 SUPERFAMILY SSF46626 26 101 7.56E-18 T 01-11-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 CDA09_18810 cab02e609c64acddadd711188b0e5149 102 PRINTS PR00606 Class ID cytochrome C signature 78 88 2.6E-24 T 01-11-2018 IPR002324 Cytochrome c, class ID GO:0005506|GO:0009055|GO:0020037 CDA09_18810 cab02e609c64acddadd711188b0e5149 102 PRINTS PR00606 Class ID cytochrome C signature 40 53 2.6E-24 T 01-11-2018 IPR002324 Cytochrome c, class ID GO:0005506|GO:0009055|GO:0020037 CDA09_18810 cab02e609c64acddadd711188b0e5149 102 PRINTS PR00606 Class ID cytochrome C signature 63 76 2.6E-24 T 01-11-2018 IPR002324 Cytochrome c, class ID GO:0005506|GO:0009055|GO:0020037 CDA09_18810 cab02e609c64acddadd711188b0e5149 102 PRINTS PR00606 Class ID cytochrome C signature 90 100 2.6E-24 T 01-11-2018 IPR002324 Cytochrome c, class ID GO:0005506|GO:0009055|GO:0020037 CDA09_18810 cab02e609c64acddadd711188b0e5149 102 PRINTS PR00606 Class ID cytochrome C signature 25 38 2.6E-24 T 01-11-2018 IPR002324 Cytochrome c, class ID GO:0005506|GO:0009055|GO:0020037 CDA09_18810 cab02e609c64acddadd711188b0e5149 102 Pfam PF00034 Cytochrome c 25 102 1.9E-7 T 01-11-2018 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 Reactome: R-HSA-111457|Reactome: R-HSA-111458|Reactome: R-HSA-111459|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 CDA09_11395 4bd18bf423bec4464a8775d8d320b9a9 238 Pfam PF00486 Transcriptional regulatory protein, C terminal 159 234 3.5E-28 T 01-11-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 CDA09_11395 4bd18bf423bec4464a8775d8d320b9a9 238 Pfam PF00072 Response regulator receiver domain 15 125 7.8E-20 T 01-11-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 CDA09_11395 4bd18bf423bec4464a8775d8d320b9a9 238 Gene3D G3DSA:3.40.50.2300 5 135 8.1E-34 T 01-11-2018 CDA09_11395 4bd18bf423bec4464a8775d8d320b9a9 238 SMART SM00448 13 125 1.7E-31 T 01-11-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 CDA09_11395 4bd18bf423bec4464a8775d8d320b9a9 238 Gene3D G3DSA:1.10.10.10 136 237 9.9E-35 T 01-11-2018 IPR036388 Winged helix-like DNA-binding domain superfamily CDA09_11395 4bd18bf423bec4464a8775d8d320b9a9 238 SUPERFAMILY SSF52172 14 193 6.21E-33 T 01-11-2018 IPR011006 CheY-like superfamily CDA09_11395 4bd18bf423bec4464a8775d8d320b9a9 238 SMART SM00862 159 234 9.5E-31 T 01-11-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 CDA09_11135 98e8817d9ca87c283f3aaffe86317e47 179 Gene3D G3DSA:3.30.1380.20 23 178 1.7E-12 T 01-11-2018 CDA09_11135 98e8817d9ca87c283f3aaffe86317e47 179 Pfam PF02830 V4R domain 111 175 6.2E-14 T 01-11-2018 IPR004096 4-vinyl reductase, 4VR CDA09_11135 98e8817d9ca87c283f3aaffe86317e47 179 SMART SM00989 106 175 8.8E-11 T 01-11-2018 IPR004096 4-vinyl reductase, 4VR CDA09_11135 98e8817d9ca87c283f3aaffe86317e47 179 SUPERFAMILY SSF111126 11 174 4.92E-24 T 01-11-2018 IPR024096 NO signalling/Golgi transport ligand-binding domain superfamily CDA09_07180 34a5a64757812d37f3b1661235da2e5a 386 Gene3D G3DSA:3.50.50.60 109 243 7.0E-80 T 01-11-2018 IPR036188 FAD/NAD(P)-binding domain superfamily CDA09_07180 34a5a64757812d37f3b1661235da2e5a 386 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 231 247 2.7E-19 T 01-11-2018 CDA09_07180 34a5a64757812d37f3b1661235da2e5a 386 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 101 119 2.7E-19 T 01-11-2018 CDA09_07180 34a5a64757812d37f3b1661235da2e5a 386 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 146 164 2.7E-19 T 01-11-2018 CDA09_07180 34a5a64757812d37f3b1661235da2e5a 386 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 5 24 2.7E-19 T 01-11-2018 CDA09_07180 34a5a64757812d37f3b1661235da2e5a 386 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 256 278 2.7E-19 T 01-11-2018 CDA09_07180 34a5a64757812d37f3b1661235da2e5a 386 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 4 26 3.7E-11 T 01-11-2018 CDA09_07180 34a5a64757812d37f3b1661235da2e5a 386 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 232 246 3.7E-11 T 01-11-2018 CDA09_07180 34a5a64757812d37f3b1661235da2e5a 386 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 271 278 3.7E-11 T 01-11-2018 CDA09_07180 34a5a64757812d37f3b1661235da2e5a 386 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 146 171 3.7E-11 T 01-11-2018 CDA09_07180 34a5a64757812d37f3b1661235da2e5a 386 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 5 278 5.4E-47 T 01-11-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 CDA09_07180 34a5a64757812d37f3b1661235da2e5a 386 Gene3D G3DSA:3.50.50.60 6 279 7.0E-80 T 01-11-2018 IPR036188 FAD/NAD(P)-binding domain superfamily CDA09_07180 34a5a64757812d37f3b1661235da2e5a 386 SUPERFAMILY SSF51905 2 305 9.17E-37 T 01-11-2018 IPR036188 FAD/NAD(P)-binding domain superfamily CDA09_07180 34a5a64757812d37f3b1661235da2e5a 386 Gene3D G3DSA:3.30.390.120 315 381 4.5E-20 T 01-11-2018 CDA09_10245 b5a5eb0f964fa911f1340957002c03e5 105 Pfam PF00111 2Fe-2S iron-sulfur cluster binding domain 9 84 9.5E-14 T 01-11-2018 IPR001041 2Fe-2S ferredoxin-type iron-sulfur binding domain GO:0009055|GO:0051536 CDA09_10245 b5a5eb0f964fa911f1340957002c03e5 105 ProSitePatterns PS00197 2Fe-2S ferredoxin-type iron-sulfur binding region signature. 40 48 - T 01-11-2018 IPR006058 2Fe-2S ferredoxin, iron-sulphur binding site GO:0051537 CDA09_10245 b5a5eb0f964fa911f1340957002c03e5 105 Gene3D G3DSA:3.10.20.30 4 95 3.1E-20 T 01-11-2018 IPR012675 Beta-grasp domain superfamily CDA09_10245 b5a5eb0f964fa911f1340957002c03e5 105 SUPERFAMILY SSF54292 4 92 4.98E-20 T 01-11-2018 IPR036010 2Fe-2S ferredoxin-like superfamily GO:0009055|GO:0051536 CDA09_00715 0c941879755b0153e3d996f778119ede 304 TIGRFAM TIGR01764 excise: DNA binding domain, excisionase family 59 106 1.2E-7 T 01-11-2018 IPR010093 SinI-like, DNA-binding domain GO:0003677 CDA09_00715 0c941879755b0153e3d996f778119ede 304 Pfam PF12728 Helix-turn-helix domain 58 107 2.9E-11 T 01-11-2018 CDA09_00715 0c941879755b0153e3d996f778119ede 304 Gene3D G3DSA:1.10.1660.10 55 108 1.5E-7 T 01-11-2018 CDA09_00715 0c941879755b0153e3d996f778119ede 304 SUPERFAMILY SSF46955 58 110 7.78E-9 T 01-11-2018 IPR009061 Putative DNA-binding domain superfamily CDA09_00715 0c941879755b0153e3d996f778119ede 304 Pfam PF14417 MEDS: MEthanogen/methylotroph, DcmR Sensory domain 140 291 9.8E-29 T 01-11-2018 IPR025847 MEDS domain CDA09_19300 79d6f98e4d03ef3466a6b1d4ca862dca 221 Gene3D G3DSA:1.25.40.10 25 221 1.1E-53 T 01-11-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 CDA09_19300 79d6f98e4d03ef3466a6b1d4ca862dca 221 SUPERFAMILY SSF81901 31 210 3.14E-44 T 01-11-2018 CDA09_19300 79d6f98e4d03ef3466a6b1d4ca862dca 221 SMART SM00671 59 94 0.0026 T 01-11-2018 IPR006597 Sel1-like repeat CDA09_19300 79d6f98e4d03ef3466a6b1d4ca862dca 221 SMART SM00671 131 166 9.2E-10 T 01-11-2018 IPR006597 Sel1-like repeat CDA09_19300 79d6f98e4d03ef3466a6b1d4ca862dca 221 SMART SM00671 29 58 35.0 T 01-11-2018 IPR006597 Sel1-like repeat CDA09_19300 79d6f98e4d03ef3466a6b1d4ca862dca 221 SMART SM00671 167 202 2.3E-8 T 01-11-2018 IPR006597 Sel1-like repeat CDA09_19300 79d6f98e4d03ef3466a6b1d4ca862dca 221 SMART SM00671 95 130 1.4E-9 T 01-11-2018 IPR006597 Sel1-like repeat CDA09_19300 79d6f98e4d03ef3466a6b1d4ca862dca 221 Pfam PF08238 Sel1 repeat 169 202 1.3E-6 T 01-11-2018 IPR006597 Sel1-like repeat CDA09_19300 79d6f98e4d03ef3466a6b1d4ca862dca 221 Pfam PF08238 Sel1 repeat 95 130 1.0E-6 T 01-11-2018 IPR006597 Sel1-like repeat CDA09_19300 79d6f98e4d03ef3466a6b1d4ca862dca 221 Pfam PF08238 Sel1 repeat 44 58 4.6 T 01-11-2018 IPR006597 Sel1-like repeat CDA09_19300 79d6f98e4d03ef3466a6b1d4ca862dca 221 Pfam PF08238 Sel1 repeat 61 92 0.0037 T 01-11-2018 IPR006597 Sel1-like repeat CDA09_19300 79d6f98e4d03ef3466a6b1d4ca862dca 221 Pfam PF08238 Sel1 repeat 132 166 9.8E-9 T 01-11-2018 IPR006597 Sel1-like repeat CDA09_12230 549597f338feaf9cc791d137350ce7e4 232 Gene3D G3DSA:1.10.10.10 15 81 2.9E-19 T 01-11-2018 IPR036388 Winged helix-like DNA-binding domain superfamily CDA09_12230 549597f338feaf9cc791d137350ce7e4 232 SUPERFAMILY SSF48008 87 222 1.31E-23 T 01-11-2018 IPR008920 Transcription regulator FadR/GntR, C-terminal CDA09_12230 549597f338feaf9cc791d137350ce7e4 232 SUPERFAMILY SSF46785 15 84 1.81E-18 T 01-11-2018 IPR036390 Winged helix DNA-binding domain superfamily CDA09_12230 549597f338feaf9cc791d137350ce7e4 232 Pfam PF07729 FCD domain 92 211 2.3E-23 T 01-11-2018 IPR011711 GntR, C-terminal CDA09_12230 549597f338feaf9cc791d137350ce7e4 232 Pfam PF00392 Bacterial regulatory proteins, gntR family 19 80 9.9E-17 T 01-11-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 CDA09_12230 549597f338feaf9cc791d137350ce7e4 232 Gene3D G3DSA:1.20.120.530 84 228 1.6E-30 T 01-11-2018 IPR008920 Transcription regulator FadR/GntR, C-terminal CDA09_12230 549597f338feaf9cc791d137350ce7e4 232 SMART SM00895 90 213 1.1E-17 T 01-11-2018 IPR011711 GntR, C-terminal CDA09_12230 549597f338feaf9cc791d137350ce7e4 232 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 40 54 4.8E-5 T 01-11-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 CDA09_12230 549597f338feaf9cc791d137350ce7e4 232 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 54 70 4.8E-5 T 01-11-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 CDA09_12230 549597f338feaf9cc791d137350ce7e4 232 SMART SM00345 22 80 1.3E-11 T 01-11-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 CDA09_09325 6b28f0098b11c889d6fe1dba339c86f1 506 Pfam PF13007 Transposase C of IS166 homeodomain 27 96 4.3E-16 T 01-11-2018 IPR024463 Transposase TnpC, homeodomain CDA09_09325 6b28f0098b11c889d6fe1dba339c86f1 506 Pfam PF13817 IS66 C-terminal element 455 492 2.2E-18 T 01-11-2018 IPR039552 Transposase IS66, C-terminal CDA09_09325 6b28f0098b11c889d6fe1dba339c86f1 506 Pfam PF13005 zinc-finger binding domain of transposase IS66 105 148 8.3E-18 T 01-11-2018 IPR024474 Zinc-finger binding domain of transposase IS66 CDA09_09325 6b28f0098b11c889d6fe1dba339c86f1 506 Pfam PF03050 Transposase IS66 family 163 448 1.4E-105 T 01-11-2018 IPR004291 Transposase, IS66 CDA09_19870 199a5015a2814b7ca766dc5325a56e28 715 SUPERFAMILY SSF49503 354 680 4.43E-28 T 01-11-2018 IPR008972 Cupredoxin CDA09_19870 199a5015a2814b7ca766dc5325a56e28 715 SUPERFAMILY SSF49503 531 682 1.15E-15 T 01-11-2018 IPR008972 Cupredoxin CDA09_19870 199a5015a2814b7ca766dc5325a56e28 715 Gene3D G3DSA:2.60.40.420 535 687 6.6E-35 T 01-11-2018 IPR008972 Cupredoxin CDA09_19870 199a5015a2814b7ca766dc5325a56e28 715 Gene3D G3DSA:2.60.40.420 147 321 3.0E-25 T 01-11-2018 IPR008972 Cupredoxin CDA09_19870 199a5015a2814b7ca766dc5325a56e28 715 Pfam PF07731 Multicopper oxidase 583 681 5.1E-16 T 01-11-2018 IPR011706 Multicopper oxidase, type 2 GO:0005507|GO:0016491|GO:0055114 CDA09_19870 199a5015a2814b7ca766dc5325a56e28 715 SUPERFAMILY SSF49503 173 323 7.48E-9 T 01-11-2018 IPR008972 Cupredoxin CDA09_19870 199a5015a2814b7ca766dc5325a56e28 715 Gene3D G3DSA:2.60.40.420 332 530 4.8E-52 T 01-11-2018 IPR008972 Cupredoxin CDA09_03525 734669d59e3e4b3f8ac99a1dfc027bd7 312 Pfam PF07670 Nucleoside recognition 21 116 7.7E-6 T 01-11-2018 IPR011642 Nucleoside transporter/FeoB GTPase, Gate domain Reactome: R-HSA-83936 CDA09_16860 bfc28163c72fdbb352b384945622df6f 301 Gene3D G3DSA:1.10.760.10 184 271 6.1E-74 T 01-11-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 CDA09_16860 bfc28163c72fdbb352b384945622df6f 301 Gene3D G3DSA:1.10.760.10 105 294 6.1E-74 T 01-11-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 CDA09_16860 bfc28163c72fdbb352b384945622df6f 301 SUPERFAMILY SSF46626 215 299 1.86E-24 T 01-11-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 CDA09_16860 bfc28163c72fdbb352b384945622df6f 301 PIRSF PIRSF000006 5 298 1.5E-94 T 01-11-2018 IPR004678 Cytochrome c oxidase cbb3-type, subunit III CDA09_16860 bfc28163c72fdbb352b384945622df6f 301 TIGRFAM TIGR00782 ccoP: cytochrome c oxidase, cbb3-type, subunit III 34 297 4.8E-90 T 01-11-2018 IPR004678 Cytochrome c oxidase cbb3-type, subunit III CDA09_16860 bfc28163c72fdbb352b384945622df6f 301 Pfam PF14715 N-terminal domain of cytochrome oxidase-cbb3, FixP 39 85 1.2E-21 T 01-11-2018 IPR032858 Cbb3-type cytochrome c oxidase subunit CcoP, N-terminal CDA09_16860 bfc28163c72fdbb352b384945622df6f 301 SUPERFAMILY SSF46626 58 209 1.75E-31 T 01-11-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 CDA09_16860 bfc28163c72fdbb352b384945622df6f 301 Pfam PF13442 Cytochrome C oxidase, cbb3-type, subunit III 132 203 6.8E-14 T 01-11-2018 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 Reactome: R-HSA-111457|Reactome: R-HSA-111458|Reactome: R-HSA-111459|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 CDA09_16860 bfc28163c72fdbb352b384945622df6f 301 Pfam PF13442 Cytochrome C oxidase, cbb3-type, subunit III 216 291 1.2E-13 T 01-11-2018 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 Reactome: R-HSA-111457|Reactome: R-HSA-111458|Reactome: R-HSA-111459|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 CDA09_16860 bfc28163c72fdbb352b384945622df6f 301 Gene3D G3DSA:1.20.58.1490 5 96 3.6E-29 T 01-11-2018 IPR038414 Cbb3-type cytochrome c oxidase subunit CcoP, N-terminal domain superfamily CDA09_04705 8cf48125c3f083c752df33754d024e1f 342 Gene3D G3DSA:3.40.190.170 34 342 7.9E-108 T 01-11-2018 IPR038404 TRAP transporter solute receptor DctP superfamily CDA09_04705 8cf48125c3f083c752df33754d024e1f 342 TIGRFAM TIGR00787 dctP: TRAP transporter solute receptor, DctP family 46 295 5.4E-66 T 01-11-2018 IPR004682 TRAP transporter solute receptor, DctP family GO:0030288|GO:0055085 CDA09_04705 8cf48125c3f083c752df33754d024e1f 342 PIRSF PIRSF006470 7 338 5.4E-70 T 01-11-2018 IPR004682 TRAP transporter solute receptor, DctP family GO:0030288|GO:0055085 CDA09_04705 8cf48125c3f083c752df33754d024e1f 342 Pfam PF03480 Bacterial extracellular solute-binding protein, family 7 55 313 5.0E-71 T 01-11-2018 IPR018389 TRAP transporter solute receptor DctP/TeaA GO:0030288|GO:0055085 CDA09_03865 08e35d15357895269ac77e509f936b46 387 Gene3D G3DSA:3.50.50.60 4 332 6.0E-92 T 01-11-2018 IPR036188 FAD/NAD(P)-binding domain superfamily CDA09_03865 08e35d15357895269ac77e509f936b46 387 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 151 166 2.0E-17 T 01-11-2018 CDA09_03865 08e35d15357895269ac77e509f936b46 387 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 275 290 2.0E-17 T 01-11-2018 CDA09_03865 08e35d15357895269ac77e509f936b46 387 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 290 306 2.0E-17 T 01-11-2018 CDA09_03865 08e35d15357895269ac77e509f936b46 387 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 4 26 2.0E-17 T 01-11-2018 CDA09_03865 08e35d15357895269ac77e509f936b46 387 SUPERFAMILY SSF51905 2 378 2.68E-54 T 01-11-2018 IPR036188 FAD/NAD(P)-binding domain superfamily CDA09_03865 08e35d15357895269ac77e509f936b46 387 TIGRFAM TIGR01988 Ubi-OHases: ubiquinone biosynthesis hydroxylase, UbiH/UbiF/VisC/COQ6 family 4 383 4.4E-112 T 01-11-2018 IPR010971 Ubiquinone biosynthesis hydroxylase UbiH/COQ6 GO:0006744|GO:0016709|GO:0050660|GO:0055114 Reactome: R-HSA-2142789 CDA09_03865 08e35d15357895269ac77e509f936b46 387 Pfam PF01494 FAD binding domain 4 330 1.2E-23 T 01-11-2018 IPR002938 FAD-binding domain GO:0071949 CDA09_03865 08e35d15357895269ac77e509f936b46 387 Gene3D G3DSA:3.30.9.50 76 264 6.0E-92 T 01-11-2018 CDA09_19150 6466fb6471a12555466ee495ff67bf66 77 TIGRFAM TIGR01552 phd_fam: prevent-host-death family protein 5 44 3.9E-8 T 01-11-2018 CDA09_19150 6466fb6471a12555466ee495ff67bf66 77 Pfam PF02604 Antitoxin Phd_YefM, type II toxin-antitoxin system 4 42 2.1E-10 T 01-11-2018 IPR006442 Type II toxin-antitoxin system, antitoxin Phd/YefM CDA09_19150 6466fb6471a12555466ee495ff67bf66 77 SUPERFAMILY SSF143120 4 44 4.19E-10 T 01-11-2018 IPR036165 YefM-like superfamily CDA09_19150 6466fb6471a12555466ee495ff67bf66 77 Gene3D G3DSA:3.40.1620.10 1 40 4.8E-8 T 01-11-2018 CDA09_15515 d1050d7f4cde92b16fe78a4fc5076e6a 272 Hamap MF_00187 Sulfur carrier protein FdhD [fdhD]. 9 272 34.986 T 01-11-2018 IPR003786 Sulfur carrier protein FdhD GO:0016783 CDA09_15515 d1050d7f4cde92b16fe78a4fc5076e6a 272 SUPERFAMILY SSF53927 15 271 3.91E-83 T 01-11-2018 IPR016193 Cytidine deaminase-like GO:0003824 CDA09_15515 d1050d7f4cde92b16fe78a4fc5076e6a 272 Pfam PF02634 FdhD/NarQ family 33 272 2.4E-77 T 01-11-2018 IPR003786 Sulfur carrier protein FdhD GO:0016783 CDA09_15515 d1050d7f4cde92b16fe78a4fc5076e6a 272 Gene3D G3DSA:3.40.140.10 128 272 2.8E-51 T 01-11-2018 CDA09_15515 d1050d7f4cde92b16fe78a4fc5076e6a 272 PIRSF PIRSF015626 3 272 3.6E-83 T 01-11-2018 IPR003786 Sulfur carrier protein FdhD GO:0016783 CDA09_15515 d1050d7f4cde92b16fe78a4fc5076e6a 272 Gene3D G3DSA:3.10.20.10 35 120 4.7E-9 T 01-11-2018 CDA09_15515 d1050d7f4cde92b16fe78a4fc5076e6a 272 TIGRFAM TIGR00129 fdhD_narQ: formate dehydrogenase family accessory protein FdhD 29 272 2.2E-72 T 01-11-2018 IPR003786 Sulfur carrier protein FdhD GO:0016783 CDA09_09695 823695a6f569ce283dcf3b41c568e3f4 407 Gene3D G3DSA:1.10.540.10 17 126 1.6E-34 T 01-11-2018 IPR037069 Acyl-CoA dehydrogenase/oxidase, N-terminal domain superfamily GO:0016627|GO:0050660|GO:0055114 CDA09_09695 823695a6f569ce283dcf3b41c568e3f4 407 Gene3D G3DSA:1.20.140.10 226 407 1.0E-33 T 01-11-2018 CDA09_09695 823695a6f569ce283dcf3b41c568e3f4 407 Gene3D G3DSA:2.40.110.10 128 224 7.2E-34 T 01-11-2018 CDA09_09695 823695a6f569ce283dcf3b41c568e3f4 407 Pfam PF02771 Acyl-CoA dehydrogenase, N-terminal domain 19 121 1.0E-7 T 01-11-2018 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal GO:0016627|GO:0050660|GO:0055114 CDA09_09695 823695a6f569ce283dcf3b41c568e3f4 407 SUPERFAMILY SSF56645 17 221 4.84E-39 T 01-11-2018 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain superfamily GO:0016627|GO:0055114 CDA09_09695 823695a6f569ce283dcf3b41c568e3f4 407 SUPERFAMILY SSF47203 239 385 5.41E-10 T 01-11-2018 IPR036250 Acyl-CoA dehydrogenase-like, C-terminal GO:0016627|GO:0055114 CDA09_09695 823695a6f569ce283dcf3b41c568e3f4 407 Pfam PF08028 Acyl-CoA dehydrogenase, C-terminal domain 257 385 7.4E-28 T 01-11-2018 IPR013107 Acyl-CoA dehydrogenase, C-terminal domain CDA09_09695 823695a6f569ce283dcf3b41c568e3f4 407 PIRSF PIRSF016578 11 407 2.8E-129 T 01-11-2018 CDA09_20825 4dfcbdc0bb9e7b103d5d924c2436550c 159 SUPERFAMILY SSF142433 4 158 1.31E-52 T 01-11-2018 IPR036653 CinA-like, C-terminal CDA09_20825 4dfcbdc0bb9e7b103d5d924c2436550c 159 Gene3D G3DSA:3.90.950.20 1 159 2.0E-57 T 01-11-2018 IPR036653 CinA-like, C-terminal CDA09_20825 4dfcbdc0bb9e7b103d5d924c2436550c 159 Pfam PF02464 Competence-damaged protein 7 158 1.2E-54 T 01-11-2018 IPR008136 CinA, C-terminal CDA09_20825 4dfcbdc0bb9e7b103d5d924c2436550c 159 TIGRFAM TIGR00199 PncC_domain: amidohydrolase, PncC family 14 157 1.1E-47 T 01-11-2018 IPR008136 CinA, C-terminal CDA09_03355 735268a4a744edd0cd4568158ede78a5 292 SUPERFAMILY SSF52821 10 163 4.98E-44 T 01-11-2018 IPR036873 Rhodanese-like domain superfamily CDA09_03355 735268a4a744edd0cd4568158ede78a5 292 Gene3D G3DSA:3.40.250.10 170 289 4.0E-32 T 01-11-2018 IPR036873 Rhodanese-like domain superfamily CDA09_03355 735268a4a744edd0cd4568158ede78a5 292 SUPERFAMILY SSF52821 168 291 4.71E-33 T 01-11-2018 IPR036873 Rhodanese-like domain superfamily CDA09_03355 735268a4a744edd0cd4568158ede78a5 292 Pfam PF00581 Rhodanese-like domain 167 280 4.3E-9 T 01-11-2018 IPR001763 Rhodanese-like domain CDA09_03355 735268a4a744edd0cd4568158ede78a5 292 Pfam PF00581 Rhodanese-like domain 18 138 9.9E-18 T 01-11-2018 IPR001763 Rhodanese-like domain CDA09_03355 735268a4a744edd0cd4568158ede78a5 292 ProSitePatterns PS00380 Rhodanese signature 1. 49 60 - T 01-11-2018 IPR001307 Thiosulphate sulfurtransferase, conserved site GO:0004792 KEGG: 00920+2.8.1.1|MetaCyc: PWY-5350|MetaCyc: PWY-7927|Reactome: R-HSA-1614558 CDA09_03355 735268a4a744edd0cd4568158ede78a5 292 Gene3D G3DSA:3.40.250.10 2 159 4.4E-48 T 01-11-2018 IPR036873 Rhodanese-like domain superfamily CDA09_03355 735268a4a744edd0cd4568158ede78a5 292 SMART SM00450 164 284 7.1E-12 T 01-11-2018 IPR001763 Rhodanese-like domain CDA09_03355 735268a4a744edd0cd4568158ede78a5 292 SMART SM00450 16 142 4.3E-21 T 01-11-2018 IPR001763 Rhodanese-like domain CDA09_01340 78ce4a3691981ef3b2551e3e35dc3351 358 SUPERFAMILY SSF63829 157 350 1.83E-11 T 01-11-2018 CDA09_01340 78ce4a3691981ef3b2551e3e35dc3351 358 SUPERFAMILY SSF63829 39 208 1.35E-17 T 01-11-2018 CDA09_01340 78ce4a3691981ef3b2551e3e35dc3351 358 Gene3D G3DSA:2.130.10.10 30 224 2.5E-31 T 01-11-2018 IPR015943 WD40/YVTN repeat-like-containing domain superfamily GO:0005515 CDA09_01340 78ce4a3691981ef3b2551e3e35dc3351 358 Pfam PF07494 Two component regulator propeller 328 350 0.003 T 01-11-2018 IPR011110 Two component regulator propeller CDA09_01340 78ce4a3691981ef3b2551e3e35dc3351 358 Pfam PF07494 Two component regulator propeller 287 309 4.2E-5 T 01-11-2018 IPR011110 Two component regulator propeller CDA09_01340 78ce4a3691981ef3b2551e3e35dc3351 358 Pfam PF07494 Two component regulator propeller 129 151 3.8E-4 T 01-11-2018 IPR011110 Two component regulator propeller CDA09_01340 78ce4a3691981ef3b2551e3e35dc3351 358 Gene3D G3DSA:2.130.10.10 225 358 2.7E-31 T 01-11-2018 IPR015943 WD40/YVTN repeat-like-containing domain superfamily GO:0005515 CDA09_13510 bd70e6b2e8e42613510891a7e458d0ee 259 Gene3D G3DSA:3.40.50.720 1 258 3.4E-59 T 01-11-2018 CDA09_13510 bd70e6b2e8e42613510891a7e458d0ee 259 SUPERFAMILY SSF51735 6 254 2.36E-58 T 01-11-2018 IPR036291 NAD(P)-binding domain superfamily CDA09_13510 bd70e6b2e8e42613510891a7e458d0ee 259 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 17 253 5.6E-35 T 01-11-2018 CDA09_13510 bd70e6b2e8e42613510891a7e458d0ee 259 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 80 91 4.6E-22 T 01-11-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CDA09_13510 bd70e6b2e8e42613510891a7e458d0ee 259 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 9 26 4.6E-22 T 01-11-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CDA09_13510 bd70e6b2e8e42613510891a7e458d0ee 259 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 153 172 4.6E-22 T 01-11-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CDA09_13510 bd70e6b2e8e42613510891a7e458d0ee 259 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 218 238 4.6E-22 T 01-11-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CDA09_13510 bd70e6b2e8e42613510891a7e458d0ee 259 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 127 143 4.6E-22 T 01-11-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CDA09_13510 bd70e6b2e8e42613510891a7e458d0ee 259 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 174 191 4.6E-22 T 01-11-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CDA09_03280 bb495ad9f839d115c2273f3eaa317896 149 SUPERFAMILY SSF54637 12 148 6.58E-43 T 01-11-2018 IPR029069 HotDog domain superfamily CDA09_03280 bb495ad9f839d115c2273f3eaa317896 149 Pfam PF01575 MaoC like domain 27 117 6.9E-25 T 01-11-2018 IPR002539 MaoC-like dehydratase domain CDA09_03280 bb495ad9f839d115c2273f3eaa317896 149 Gene3D G3DSA:3.10.129.10 1 145 1.1E-45 T 01-11-2018 CDA09_16155 2190b4abfb24470f7d69acda03123647 955 SUPERFAMILY SSF51998 18 609 8.24E-174 T 01-11-2018 CDA09_16155 2190b4abfb24470f7d69acda03123647 955 Gene3D G3DSA:3.20.70.20 11 602 1.2E-192 T 01-11-2018 CDA09_16155 2190b4abfb24470f7d69acda03123647 955 TIGRFAM TIGR02504 NrdJ_Z: ribonucleoside-diphosphate reductase, adenosylcobalamin-dependent 27 595 1.7E-182 T 01-11-2018 IPR013344 Ribonucleotide reductase, adenosylcobalamin-dependent GO:0000166|GO:0004748|GO:0031419|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|KEGG: 00983+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227 CDA09_16155 2190b4abfb24470f7d69acda03123647 955 Pfam PF02867 Ribonucleotide reductase, barrel domain 95 587 1.5E-142 T 01-11-2018 IPR000788 Ribonucleotide reductase large subunit, C-terminal GO:0006260|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|KEGG: 00983+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: R-HSA-499943 CDA09_16155 2190b4abfb24470f7d69acda03123647 955 PRINTS PR01183 Ribonucleotide reductase large chain signature 295 306 1.3E-26 T 01-11-2018 IPR000788 Ribonucleotide reductase large subunit, C-terminal GO:0006260|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|KEGG: 00983+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: R-HSA-499943 CDA09_16155 2190b4abfb24470f7d69acda03123647 955 PRINTS PR01183 Ribonucleotide reductase large chain signature 455 482 1.3E-26 T 01-11-2018 IPR000788 Ribonucleotide reductase large subunit, C-terminal GO:0006260|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|KEGG: 00983+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: R-HSA-499943 CDA09_16155 2190b4abfb24470f7d69acda03123647 955 PRINTS PR01183 Ribonucleotide reductase large chain signature 399 422 1.3E-26 T 01-11-2018 IPR000788 Ribonucleotide reductase large subunit, C-terminal GO:0006260|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|KEGG: 00983+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: R-HSA-499943 CDA09_16155 2190b4abfb24470f7d69acda03123647 955 PRINTS PR01183 Ribonucleotide reductase large chain signature 371 393 1.3E-26 T 01-11-2018 IPR000788 Ribonucleotide reductase large subunit, C-terminal GO:0006260|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|KEGG: 00983+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: R-HSA-499943 CDA09_16155 2190b4abfb24470f7d69acda03123647 955 PRINTS PR01183 Ribonucleotide reductase large chain signature 176 195 1.3E-26 T 01-11-2018 IPR000788 Ribonucleotide reductase large subunit, C-terminal GO:0006260|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|KEGG: 00983+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: R-HSA-499943 CDA09_16155 2190b4abfb24470f7d69acda03123647 955 PRINTS PR01183 Ribonucleotide reductase large chain signature 333 356 1.3E-26 T 01-11-2018 IPR000788 Ribonucleotide reductase large subunit, C-terminal GO:0006260|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|KEGG: 00983+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: R-HSA-499943 CDA09_19180 89968a903c0b6cf0a14d171a705de387 132 Gene3D G3DSA:3.40.50.1010 1 126 1.4E-29 T 01-11-2018 CDA09_19180 89968a903c0b6cf0a14d171a705de387 132 Hamap MF_00265 tRNA(fMet)-specific endonuclease VapC [vapC]. 3 130 9.621 T 01-11-2018 IPR022907 VapC family GO:0004540 CDA09_19180 89968a903c0b6cf0a14d171a705de387 132 SUPERFAMILY SSF88723 1 125 4.21E-19 T 01-11-2018 IPR029060 PIN-like domain superfamily CDA09_19180 89968a903c0b6cf0a14d171a705de387 132 Pfam PF01850 PIN domain 3 123 1.1E-10 T 01-11-2018 IPR002716 PIN domain CDA09_06720 bb57e1c665c937e73f8c090aa75e1ec6 225 Gene3D G3DSA:2.30.30.910 91 219 1.1E-32 T 01-11-2018 CDA09_06720 bb57e1c665c937e73f8c090aa75e1ec6 225 Gene3D G3DSA:2.60.40.4070 106 191 1.1E-32 T 01-11-2018 CDA09_06720 bb57e1c665c937e73f8c090aa75e1ec6 225 Pfam PF03963 Flagellar hook capping protein - N-terminal region 10 80 5.3E-23 T 01-11-2018 IPR005648 Flagellar hook capping protein CDA09_06720 bb57e1c665c937e73f8c090aa75e1ec6 225 Pfam PF13861 FlgD Tudor-like domain 91 222 3.3E-14 T 01-11-2018 IPR025963 FlgD Tudor-like domain CDA09_06720 bb57e1c665c937e73f8c090aa75e1ec6 225 Pfam PF13860 FlgD Ig-like domain 106 182 5.0E-19 T 01-11-2018 IPR025965 FlgD Ig-like domain CDA09_07135 632753a501d7a4fb6e0f4e989295cedd 225 Hamap MF_00336 ATP-dependent dethiobiotin synthetase BioD [bioD]. 4 219 29.408 T 01-11-2018 IPR004472 Dethiobiotin synthase BioD GO:0000287|GO:0004141|GO:0005524|GO:0009102 KEGG: 00780+6.3.3.3|MetaCyc: PWY-7380 CDA09_07135 632753a501d7a4fb6e0f4e989295cedd 225 PIRSF PIRSF006755 3 223 1.5E-67 T 01-11-2018 IPR004472 Dethiobiotin synthase BioD GO:0000287|GO:0004141|GO:0005524|GO:0009102 KEGG: 00780+6.3.3.3|MetaCyc: PWY-7380 CDA09_07135 632753a501d7a4fb6e0f4e989295cedd 225 SUPERFAMILY SSF52540 5 221 3.88E-61 T 01-11-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CDA09_07135 632753a501d7a4fb6e0f4e989295cedd 225 TIGRFAM TIGR00347 bioD: dethiobiotin synthase 8 178 3.1E-47 T 01-11-2018 IPR004472 Dethiobiotin synthase BioD GO:0000287|GO:0004141|GO:0005524|GO:0009102 KEGG: 00780+6.3.3.3|MetaCyc: PWY-7380 CDA09_07135 632753a501d7a4fb6e0f4e989295cedd 225 Pfam PF13500 AAA domain 6 211 1.9E-40 T 01-11-2018 CDA09_07135 632753a501d7a4fb6e0f4e989295cedd 225 Gene3D G3DSA:3.40.50.300 5 223 7.2E-69 T 01-11-2018 CDA09_10115 b74d522bbea94427f6afc4a499ea8276 149 SUPERFAMILY SSF50249 31 135 5.31E-20 T 01-11-2018 IPR012340 Nucleic acid-binding, OB-fold CDA09_10115 b74d522bbea94427f6afc4a499ea8276 149 Pfam PF12172 Rubredoxin-like zinc ribbon domain (DUF35_N) 32 57 3.6E-5 T 01-11-2018 IPR022002 Domain of unknown function DUF35, rubredoxin-like zinc ribbon domain, N-terminal CDA09_10115 b74d522bbea94427f6afc4a499ea8276 149 Pfam PF01796 DUF35 OB-fold domain, acyl-CoA-associated 67 130 4.0E-16 T 01-11-2018 IPR002878 Domain of unknown function DUF35, OB-fold, C-terminal CDA09_17005 22d049415131e165dc2fe5650b572c58 265 Pfam PF00378 Enoyl-CoA hydratase/isomerase 8 264 8.2E-50 T 01-11-2018 IPR001753 Enoyl-CoA hydratase/isomerase GO:0003824 CDA09_17005 22d049415131e165dc2fe5650b572c58 265 Gene3D G3DSA:1.10.12.10 209 265 4.7E-17 T 01-11-2018 IPR014748 Enoyl-CoA hydratase, C-terminal CDA09_17005 22d049415131e165dc2fe5650b572c58 265 Gene3D G3DSA:3.90.226.10 1 206 1.7E-58 T 01-11-2018 CDA09_17005 22d049415131e165dc2fe5650b572c58 265 SUPERFAMILY SSF52096 3 265 1.49E-72 T 01-11-2018 IPR029045 ClpP/crotonase-like domain superfamily CDA09_13410 f37732f25bf1811682c847dbb918160d 159 Gene3D G3DSA:3.10.129.10 1 148 1.5E-7 T 01-11-2018 CDA09_13410 f37732f25bf1811682c847dbb918160d 159 SUPERFAMILY SSF54637 12 143 6.21E-11 T 01-11-2018 IPR029069 HotDog domain superfamily CDA09_15985 ab6fefd235166f01c074dfbdf21697fc 217 Pfam PF01810 LysE type translocator 16 213 2.0E-41 T 01-11-2018 IPR001123 Amino acid exporter protein, LeuE-type GO:0006865|GO:0016020 CDA09_15985 ab6fefd235166f01c074dfbdf21697fc 217 PIRSF PIRSF006324 2 216 1.6E-49 T 01-11-2018 IPR001123 Amino acid exporter protein, LeuE-type GO:0006865|GO:0016020 CDA09_03490 f378b83b2b5ffd01a743ab5b704e0f8e 414 Gene3D G3DSA:3.40.718.10 1 414 5.9E-184 T 01-11-2018 CDA09_03490 f378b83b2b5ffd01a743ab5b704e0f8e 414 Pfam PF00180 Isocitrate/isopropylmalate dehydrogenase 27 409 2.5E-117 T 01-11-2018 IPR024084 Isopropylmalate dehydrogenase-like domain GO:0016616|GO:0055114 Reactome: R-HSA-71403 CDA09_03490 f378b83b2b5ffd01a743ab5b704e0f8e 414 TIGRFAM TIGR00183 prok_nadp_idh: isocitrate dehydrogenase, NADP-dependent 4 414 1.0E-217 T 01-11-2018 IPR004439 Isocitrate dehydrogenase NADP-dependent, dimeric, prokaryotic GO:0004450|GO:0006099|GO:0055114 KEGG: 00020+1.1.1.42|KEGG: 00480+1.1.1.42|KEGG: 00720+1.1.1.42|MetaCyc: PWY-5913|MetaCyc: PWY-6549|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7124|MetaCyc: PWY-7254|MetaCyc: PWY-7268 CDA09_03490 f378b83b2b5ffd01a743ab5b704e0f8e 414 SUPERFAMILY SSF53659 19 414 8.26E-145 T 01-11-2018 CDA09_03490 f378b83b2b5ffd01a743ab5b704e0f8e 414 SMART SM01329 26 410 6.9E-182 T 01-11-2018 IPR024084 Isopropylmalate dehydrogenase-like domain GO:0016616|GO:0055114 Reactome: R-HSA-71403 CDA09_03490 f378b83b2b5ffd01a743ab5b704e0f8e 414 ProSitePatterns PS00470 Isocitrate and isopropylmalate dehydrogenases signature. 301 320 - T 01-11-2018 IPR019818 Isocitrate/isopropylmalate dehydrogenase, conserved site GO:0000287|GO:0016616|GO:0051287|GO:0055114 Reactome: R-HSA-71403 CDA09_11785 3a65b983dabb8f5fc9eba2f6cd914968 246 SUPERFAMILY SSF55469 22 236 5.89E-47 T 01-11-2018 IPR000415 Nitroreductase-like GO:0016491 Reactome: R-HSA-209968 CDA09_11785 3a65b983dabb8f5fc9eba2f6cd914968 246 Gene3D G3DSA:3.40.109.10 15 235 3.2E-65 T 01-11-2018 IPR000415 Nitroreductase-like GO:0016491 Reactome: R-HSA-209968 CDA09_11785 3a65b983dabb8f5fc9eba2f6cd914968 246 Pfam PF00881 Nitroreductase family 24 214 2.8E-32 T 01-11-2018 IPR029479 Nitroreductase Reactome: R-HSA-209968 CDA09_09715 81a379d7cdbb85567dc609aa4ecf2912 314 SMART SM00893 3 183 2.0E-40 T 01-11-2018 IPR014730 Electron transfer flavoprotein, alpha/beta-subunit, N-terminal Reactome: R-HSA-611105 CDA09_09715 81a379d7cdbb85567dc609aa4ecf2912 314 ProSitePatterns PS00696 Electron transfer flavoprotein alpha-subunit signature. 255 281 - T 01-11-2018 IPR018206 Electron transfer flavoprotein subunit alpha, conserved site Reactome: R-HSA-611105 CDA09_09715 81a379d7cdbb85567dc609aa4ecf2912 314 SUPERFAMILY SSF52402 2 187 6.07E-47 T 01-11-2018 CDA09_09715 81a379d7cdbb85567dc609aa4ecf2912 314 Gene3D G3DSA:3.40.50.620 2 183 2.7E-47 T 01-11-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold CDA09_09715 81a379d7cdbb85567dc609aa4ecf2912 314 PIRSF PIRSF000089 1 314 7.3E-100 T 01-11-2018 IPR001308 Electron transfer flavoprotein alpha subunit/FixB GO:0009055|GO:0050660 Reactome: R-HSA-611105 CDA09_09715 81a379d7cdbb85567dc609aa4ecf2912 314 Pfam PF01012 Electron transfer flavoprotein domain 3 167 5.0E-34 T 01-11-2018 IPR014730 Electron transfer flavoprotein, alpha/beta-subunit, N-terminal Reactome: R-HSA-611105 CDA09_09715 81a379d7cdbb85567dc609aa4ecf2912 314 Gene3D G3DSA:3.40.50.1220 185 313 2.8E-55 T 01-11-2018 CDA09_09715 81a379d7cdbb85567dc609aa4ecf2912 314 SUPERFAMILY SSF52467 188 309 2.23E-45 T 01-11-2018 IPR029035 DHS-like NAD/FAD-binding domain superfamily CDA09_09715 81a379d7cdbb85567dc609aa4ecf2912 314 Pfam PF00766 Electron transfer flavoprotein FAD-binding domain 191 274 2.1E-34 T 01-11-2018 IPR014731 Electron transfer flavoprotein, alpha subunit, C-terminal Reactome: R-HSA-611105 CDA09_09850 341ded2c51b0bdb8e803ccf34ac31cd9 371 Gene3D G3DSA:1.20.140.10 226 370 6.0E-35 T 01-11-2018 CDA09_09850 341ded2c51b0bdb8e803ccf34ac31cd9 371 Gene3D G3DSA:2.40.110.10 124 219 7.7E-13 T 01-11-2018 CDA09_09850 341ded2c51b0bdb8e803ccf34ac31cd9 371 Gene3D G3DSA:1.10.540.10 5 114 1.9E-26 T 01-11-2018 IPR037069 Acyl-CoA dehydrogenase/oxidase, N-terminal domain superfamily GO:0016627|GO:0050660|GO:0055114 CDA09_09850 341ded2c51b0bdb8e803ccf34ac31cd9 371 SUPERFAMILY SSF56645 5 213 2.62E-37 T 01-11-2018 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain superfamily GO:0016627|GO:0055114 CDA09_09850 341ded2c51b0bdb8e803ccf34ac31cd9 371 SUPERFAMILY SSF47203 224 369 9.5E-35 T 01-11-2018 IPR036250 Acyl-CoA dehydrogenase-like, C-terminal GO:0016627|GO:0055114 CDA09_09850 341ded2c51b0bdb8e803ccf34ac31cd9 371 Pfam PF02771 Acyl-CoA dehydrogenase, N-terminal domain 8 113 3.6E-20 T 01-11-2018 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal GO:0016627|GO:0050660|GO:0055114 CDA09_09850 341ded2c51b0bdb8e803ccf34ac31cd9 371 Pfam PF00441 Acyl-CoA dehydrogenase, C-terminal domain 229 367 1.3E-24 T 01-11-2018 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal GO:0016627|GO:0055114 CDA09_16995 93447fd42df816a2baf10088416f4804 247 SMART SM00822 This enzymatic domain is part of bacterial polyketide synthases and catalyses the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain. It uses NADPH to reduce the keto group to a hydroxy group. 10 195 2.3E-4 T 01-11-2018 CDA09_16995 93447fd42df816a2baf10088416f4804 247 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 146 174 - T 01-11-2018 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 CDA09_16995 93447fd42df816a2baf10088416f4804 247 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 159 178 1.3E-11 T 01-11-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CDA09_16995 93447fd42df816a2baf10088416f4804 247 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 139 147 1.3E-11 T 01-11-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CDA09_16995 93447fd42df816a2baf10088416f4804 247 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 85 96 1.3E-11 T 01-11-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CDA09_16995 93447fd42df816a2baf10088416f4804 247 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 11 28 1.6E-37 T 01-11-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CDA09_16995 93447fd42df816a2baf10088416f4804 247 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 85 96 1.6E-37 T 01-11-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CDA09_16995 93447fd42df816a2baf10088416f4804 247 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 133 149 1.6E-37 T 01-11-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CDA09_16995 93447fd42df816a2baf10088416f4804 247 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 159 178 1.6E-37 T 01-11-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CDA09_16995 93447fd42df816a2baf10088416f4804 247 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 179 196 1.6E-37 T 01-11-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CDA09_16995 93447fd42df816a2baf10088416f4804 247 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 210 230 1.6E-37 T 01-11-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CDA09_16995 93447fd42df816a2baf10088416f4804 247 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 16 246 2.6E-59 T 01-11-2018 CDA09_16995 93447fd42df816a2baf10088416f4804 247 SUPERFAMILY SSF51735 9 246 9.89E-77 T 01-11-2018 IPR036291 NAD(P)-binding domain superfamily CDA09_16995 93447fd42df816a2baf10088416f4804 247 Gene3D G3DSA:3.40.50.720 1 247 3.0E-75 T 01-11-2018 CDA09_11625 7c50da47554a8fc8cabdbb0e2ca7733f 378 Pfam PF03824 High-affinity nickel-transport protein 13 368 1.7E-37 T 01-11-2018 IPR011541 Nickel/cobalt transporter, high-affinity GO:0015099|GO:0016021|GO:0035444|GO:0046872 CDA09_16225 d580fd7a83be87e410113f95337e8622 158 SUPERFAMILY SSF56770 9 153 1.44E-66 T 01-11-2018 CDA09_16225 d580fd7a83be87e410113f95337e8622 158 Hamap MF_01356 NAD(P)H-quinone oxidoreductase subunit K, chloroplastic [ndhK]. 1 151 42.043 T 01-11-2018 IPR006138 NADH-ubiquinone oxidoreductase, 20 Kd subunit GO:0008137|GO:0048038|GO:0051539|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 CDA09_16225 d580fd7a83be87e410113f95337e8622 158 Gene3D G3DSA:3.40.50.12280 2 158 3.5E-78 T 01-11-2018 CDA09_16225 d580fd7a83be87e410113f95337e8622 158 TIGRFAM TIGR01957 nuoB_fam: NADH-quinone oxidoreductase, B subunit 11 152 6.6E-77 T 01-11-2018 IPR006138 NADH-ubiquinone oxidoreductase, 20 Kd subunit GO:0008137|GO:0048038|GO:0051539|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 CDA09_16225 d580fd7a83be87e410113f95337e8622 158 Pfam PF01058 NADH ubiquinone oxidoreductase, 20 Kd subunit 38 145 1.0E-21 T 01-11-2018 IPR006137 NADH:ubiquinone oxidoreductase-like, 20kDa subunit GO:0051536|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 CDA09_16225 d580fd7a83be87e410113f95337e8622 158 ProSitePatterns PS01150 Respiratory-chain NADH dehydrogenase 20 Kd subunit signature. 118 134 - T 01-11-2018 IPR006138 NADH-ubiquinone oxidoreductase, 20 Kd subunit GO:0008137|GO:0048038|GO:0051539|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 CDA09_06605 8950426bb7b01d2971b7ed0fefa2aba6 480 Gene3D G3DSA:3.40.309.10 254 444 1.8E-157 T 01-11-2018 IPR016163 Aldehyde dehydrogenase, C-terminal GO:0016491|GO:0016620|GO:0055114 CDA09_06605 8950426bb7b01d2971b7ed0fefa2aba6 480 SUPERFAMILY SSF53720 4 475 4.19E-148 T 01-11-2018 IPR016161 Aldehyde/histidinol dehydrogenase GO:0016491|GO:0055114 CDA09_06605 8950426bb7b01d2971b7ed0fefa2aba6 480 ProSitePatterns PS00687 Aldehyde dehydrogenases glutamic acid active site. 249 256 - T 01-11-2018 IPR029510 Aldehyde dehydrogenase, glutamic acid active site GO:0016491|GO:0055114 CDA09_06605 8950426bb7b01d2971b7ed0fefa2aba6 480 Pfam PF00171 Aldehyde dehydrogenase family 14 474 6.9E-150 T 01-11-2018 IPR015590 Aldehyde dehydrogenase domain GO:0016491|GO:0055114 CDA09_06605 8950426bb7b01d2971b7ed0fefa2aba6 480 Gene3D G3DSA:3.40.605.10 10 472 1.8E-157 T 01-11-2018 IPR016162 Aldehyde dehydrogenase, N-terminal GO:0016491|GO:0055114 CDA09_10425 913e844c14923cbaf9aac9c673fc05a1 118 Pfam PF04663 Phenol hydroxylase conserved region 14 79 5.5E-28 T 01-11-2018 IPR006756 Phenol hydroxylase KEGG: 00623+1.14.13.7|KEGG: 00627+1.14.13.7|MetaCyc: PWY-5418|MetaCyc: PWY-6197 CDA09_10425 913e844c14923cbaf9aac9c673fc05a1 118 Gene3D G3DSA:3.10.20.560 16 118 5.2E-39 T 01-11-2018 CDA09_19250 5f02aa83cff57ff9397fdd56a4e294be 306 Gene3D G3DSA:3.40.1030.10 74 306 5.6E-74 T 01-11-2018 IPR035902 Nucleoside phosphorylase/phosphoribosyltransferase catalytic domain superfamily Reactome: R-HSA-73614|Reactome: R-HSA-73621 CDA09_19250 5f02aa83cff57ff9397fdd56a4e294be 306 Gene3D G3DSA:1.20.970.10 1 70 8.6E-27 T 01-11-2018 CDA09_19250 5f02aa83cff57ff9397fdd56a4e294be 306 Pfam PF02885 Glycosyl transferase family, helical bundle domain 5 66 7.3E-10 T 01-11-2018 IPR017459 Glycosyl transferase family 3, N-terminal domain Reactome: R-HSA-73614|Reactome: R-HSA-73621 CDA09_19250 5f02aa83cff57ff9397fdd56a4e294be 306 SUPERFAMILY SSF47648 7 70 3.01E-13 T 01-11-2018 IPR036320 Glycosyl transferase family 3, N-terminal domain superfamily Reactome: R-HSA-73614|Reactome: R-HSA-73621 CDA09_19250 5f02aa83cff57ff9397fdd56a4e294be 306 SUPERFAMILY SSF52418 77 303 3.14E-37 T 01-11-2018 IPR035902 Nucleoside phosphorylase/phosphoribosyltransferase catalytic domain superfamily Reactome: R-HSA-73614|Reactome: R-HSA-73621 CDA09_08860 a8d0dd860bc89e569d82114ff2e9fd68 250 SMART SM00100 33 151 4.4E-20 T 01-11-2018 IPR000595 Cyclic nucleotide-binding domain CDA09_08860 a8d0dd860bc89e569d82114ff2e9fd68 250 Gene3D G3DSA:1.10.10.10 166 246 9.5E-25 T 01-11-2018 IPR036388 Winged helix-like DNA-binding domain superfamily CDA09_08860 a8d0dd860bc89e569d82114ff2e9fd68 250 SMART SM00419 191 239 1.5E-7 T 01-11-2018 IPR012318 Crp-type HTH domain GO:0003677|GO:0006355 CDA09_08860 a8d0dd860bc89e569d82114ff2e9fd68 250 SUPERFAMILY SSF46785 170 245 1.15E-13 T 01-11-2018 IPR036390 Winged helix DNA-binding domain superfamily CDA09_08860 a8d0dd860bc89e569d82114ff2e9fd68 250 Gene3D G3DSA:2.60.120.10 21 165 4.2E-44 T 01-11-2018 IPR014710 RmlC-like jelly roll fold CDA09_08860 a8d0dd860bc89e569d82114ff2e9fd68 250 SUPERFAMILY SSF51206 27 162 2.49E-35 T 01-11-2018 IPR018490 Cyclic nucleotide-binding-like CDA09_08860 a8d0dd860bc89e569d82114ff2e9fd68 250 Pfam PF00027 Cyclic nucleotide-binding domain 52 138 2.3E-20 T 01-11-2018 IPR000595 Cyclic nucleotide-binding domain CDA09_08860 a8d0dd860bc89e569d82114ff2e9fd68 250 Pfam PF13545 Crp-like helix-turn-helix domain 171 244 5.9E-16 T 01-11-2018 IPR012318 Crp-type HTH domain GO:0003677|GO:0006355 CDA09_00315 544e9775a318e87d7b97ecaa2d40bccd 279 PIRSF PIRSF015626 10 279 1.6E-73 T 01-11-2018 IPR003786 Sulfur carrier protein FdhD GO:0016783 CDA09_00315 544e9775a318e87d7b97ecaa2d40bccd 279 Pfam PF02634 FdhD/NarQ family 40 277 6.4E-76 T 01-11-2018 IPR003786 Sulfur carrier protein FdhD GO:0016783 CDA09_00315 544e9775a318e87d7b97ecaa2d40bccd 279 Gene3D G3DSA:3.40.140.10 130 279 2.5E-38 T 01-11-2018 CDA09_00315 544e9775a318e87d7b97ecaa2d40bccd 279 Hamap MF_00187 Sulfur carrier protein FdhD [fdhD]. 18 278 27.146 T 01-11-2018 IPR003786 Sulfur carrier protein FdhD GO:0016783 CDA09_00315 544e9775a318e87d7b97ecaa2d40bccd 279 Gene3D G3DSA:3.10.20.10 41 124 1.1E-9 T 01-11-2018 CDA09_00315 544e9775a318e87d7b97ecaa2d40bccd 279 SUPERFAMILY SSF53927 26 277 1.02E-68 T 01-11-2018 IPR016193 Cytidine deaminase-like GO:0003824 CDA09_08135 1db0eb232adc04472ad123fa9fa40996 76 Gene3D G3DSA:3.30.110.40 1 76 3.2E-28 T 01-11-2018 IPR036868 TusA-like domain superfamily CDA09_08135 1db0eb232adc04472ad123fa9fa40996 76 Pfam PF01206 Sulfurtransferase TusA 5 74 1.4E-23 T 01-11-2018 IPR001455 TusA-like domain CDA09_08135 1db0eb232adc04472ad123fa9fa40996 76 ProSitePatterns PS01148 Uncharacterized protein family UPF0033 signature. 7 31 - T 01-11-2018 IPR001455 TusA-like domain CDA09_08135 1db0eb232adc04472ad123fa9fa40996 76 SUPERFAMILY SSF64307 2 75 3.66E-24 T 01-11-2018 IPR036868 TusA-like domain superfamily CDA09_14645 7fef42d82d38db014b27073c681466a9 278 SUPERFAMILY SSF56300 27 244 1.98E-37 T 01-11-2018 CDA09_14645 7fef42d82d38db014b27073c681466a9 278 Pfam PF00149 Calcineurin-like phosphoesterase 27 218 6.8E-11 T 01-11-2018 IPR004843 Calcineurin-like phosphoesterase domain, ApaH type GO:0016787 CDA09_14645 7fef42d82d38db014b27073c681466a9 278 Gene3D G3DSA:3.60.21.10 20 263 1.6E-53 T 01-11-2018 IPR029052 Metallo-dependent phosphatase-like CDA09_07285 30cb5658c2f52c7b8922d063bfdb7b94 417 Pfam PF07690 Major Facilitator Superfamily 16 366 6.4E-41 T 01-11-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 CDA09_07285 30cb5658c2f52c7b8922d063bfdb7b94 417 Gene3D G3DSA:1.20.1250.20 191 408 7.8E-58 T 01-11-2018 CDA09_07285 30cb5658c2f52c7b8922d063bfdb7b94 417 SUPERFAMILY SSF103473 5 400 6.02E-65 T 01-11-2018 IPR036259 MFS transporter superfamily CDA09_07285 30cb5658c2f52c7b8922d063bfdb7b94 417 Gene3D G3DSA:1.20.1250.20 2 185 3.8E-44 T 01-11-2018 CDA09_13430 4640aaf79667a3c3468b45855fd7efe4 289 Pfam PF06629 MltA-interacting protein MipA 45 277 3.0E-33 T 01-11-2018 IPR010583 MltA-interacting MipA CDA09_07715 281796db7b1094f6599bfc5fdd7b63de 217 SUPERFAMILY SSF52540 9 191 2.7E-20 T 01-11-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CDA09_07715 281796db7b1094f6599bfc5fdd7b63de 217 Gene3D G3DSA:3.40.50.300 1 193 5.3E-64 T 01-11-2018 CDA09_07715 281796db7b1094f6599bfc5fdd7b63de 217 Pfam PF00025 ADP-ribosylation factor family 70 184 6.7E-6 T 01-11-2018 IPR006689 Small GTPase superfamily, ARF/SAR type GO:0005525 CDA09_12235 5ee6e7e101dc2c8d8b32c716534f452b 365 Gene3D G3DSA:3.40.50.2300 141 269 1.8E-103 T 01-11-2018 CDA09_12235 5ee6e7e101dc2c8d8b32c716534f452b 365 Gene3D G3DSA:3.40.50.2300 31 341 1.8E-103 T 01-11-2018 CDA09_12235 5ee6e7e101dc2c8d8b32c716534f452b 365 Pfam PF13458 Periplasmic binding protein 25 359 1.1E-62 T 01-11-2018 IPR028081 Leucine-binding protein domain CDA09_12235 5ee6e7e101dc2c8d8b32c716534f452b 365 SUPERFAMILY SSF53822 23 362 3.03E-91 T 01-11-2018 IPR028082 Periplasmic binding protein-like I CDA09_12235 5ee6e7e101dc2c8d8b32c716534f452b 365 PRINTS PR00337 Leu/Ile/Val-binding protein family signature 325 340 5.1E-25 T 01-11-2018 IPR000709 Leu/Ile/Val-binding protein GO:0006865 CDA09_12235 5ee6e7e101dc2c8d8b32c716534f452b 365 PRINTS PR00337 Leu/Ile/Val-binding protein family signature 46 62 5.1E-25 T 01-11-2018 IPR000709 Leu/Ile/Val-binding protein GO:0006865 CDA09_12235 5ee6e7e101dc2c8d8b32c716534f452b 365 PRINTS PR00337 Leu/Ile/Val-binding protein family signature 24 40 5.1E-25 T 01-11-2018 IPR000709 Leu/Ile/Val-binding protein GO:0006865 CDA09_12235 5ee6e7e101dc2c8d8b32c716534f452b 365 PRINTS PR00337 Leu/Ile/Val-binding protein family signature 65 83 5.1E-25 T 01-11-2018 IPR000709 Leu/Ile/Val-binding protein GO:0006865 CDA09_12235 5ee6e7e101dc2c8d8b32c716534f452b 365 PRINTS PR00337 Leu/Ile/Val-binding protein family signature 86 96 5.1E-25 T 01-11-2018 IPR000709 Leu/Ile/Val-binding protein GO:0006865 CDA09_12235 5ee6e7e101dc2c8d8b32c716534f452b 365 PRINTS PR00337 Leu/Ile/Val-binding protein family signature 251 269 5.1E-25 T 01-11-2018 IPR000709 Leu/Ile/Val-binding protein GO:0006865 CDA09_04330 8bad05c313188bf9bc7cfdd9a93502ad 115 SUPERFAMILY SSF54197 1 107 2.78E-40 T 01-11-2018 IPR036265 HIT-like superfamily CDA09_04330 8bad05c313188bf9bc7cfdd9a93502ad 115 ProSitePatterns PS00892 HIT domain signature. 86 104 - T 01-11-2018 IPR019808 Histidine triad, conserved site CDA09_04330 8bad05c313188bf9bc7cfdd9a93502ad 115 PRINTS PR00332 Histidine triad family signature 93 103 2.9E-20 T 01-11-2018 IPR001310 Histidine triad (HIT) protein CDA09_04330 8bad05c313188bf9bc7cfdd9a93502ad 115 PRINTS PR00332 Histidine triad family signature 26 44 2.9E-20 T 01-11-2018 IPR001310 Histidine triad (HIT) protein CDA09_04330 8bad05c313188bf9bc7cfdd9a93502ad 115 PRINTS PR00332 Histidine triad family signature 5 21 2.9E-20 T 01-11-2018 IPR001310 Histidine triad (HIT) protein CDA09_04330 8bad05c313188bf9bc7cfdd9a93502ad 115 Gene3D G3DSA:3.30.428.10 1 109 5.7E-42 T 01-11-2018 IPR036265 HIT-like superfamily CDA09_04330 8bad05c313188bf9bc7cfdd9a93502ad 115 Pfam PF01230 HIT domain 12 105 1.2E-25 T 01-11-2018 IPR001310 Histidine triad (HIT) protein CDA09_13660 3ed1ca0786e170125281ae477861116b 328 Pfam PF01557 Fumarylacetoacetate (FAA) hydrolase family 138 325 1.3E-62 T 01-11-2018 IPR011234 Fumarylacetoacetase-like, C-terminal GO:0003824 CDA09_13660 3ed1ca0786e170125281ae477861116b 328 SUPERFAMILY SSF56529 133 326 2.22E-65 T 01-11-2018 IPR036663 Fumarylacetoacetase-like, C-terminal domain superfamily GO:0003824 CDA09_13660 3ed1ca0786e170125281ae477861116b 328 Gene3D G3DSA:3.90.850.10 25 327 3.6E-74 T 01-11-2018 IPR036663 Fumarylacetoacetase-like, C-terminal domain superfamily GO:0003824 CDA09_01955 a3423566ca2a2a0029f775ca2137267e 145 SUPERFAMILY SSF52402 3 141 2.65E-32 T 01-11-2018 CDA09_01955 a3423566ca2a2a0029f775ca2137267e 145 PRINTS PR01438 Universal stress protein signature 1 19 1.6E-15 T 01-11-2018 IPR006015 Universal stress protein A CDA09_01955 a3423566ca2a2a0029f775ca2137267e 145 PRINTS PR01438 Universal stress protein signature 100 112 1.6E-15 T 01-11-2018 IPR006015 Universal stress protein A CDA09_01955 a3423566ca2a2a0029f775ca2137267e 145 PRINTS PR01438 Universal stress protein signature 118 140 1.6E-15 T 01-11-2018 IPR006015 Universal stress protein A CDA09_01955 a3423566ca2a2a0029f775ca2137267e 145 Gene3D G3DSA:3.40.50.620 1 140 1.2E-32 T 01-11-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold CDA09_01955 a3423566ca2a2a0029f775ca2137267e 145 Pfam PF00582 Universal stress protein family 3 140 1.4E-27 T 01-11-2018 IPR006016 UspA CDA09_15975 ef7e569f721a14785d85277ba878c3cf 149 TIGRFAM TIGR00256 TIGR00256: D-tyrosyl-tRNA(Tyr) deacylase 1 143 2.0E-55 T 01-11-2018 IPR003732 D-aminoacyl-tRNA deacylase DTD GO:0002161|GO:0005737|GO:0051499 CDA09_15975 ef7e569f721a14785d85277ba878c3cf 149 Gene3D G3DSA:3.50.80.10 1 145 4.8E-56 T 01-11-2018 IPR023509 D-aminoacyl-tRNA deacylase-like superfamily CDA09_15975 ef7e569f721a14785d85277ba878c3cf 149 SUPERFAMILY SSF69500 1 143 6.15E-55 T 01-11-2018 IPR023509 D-aminoacyl-tRNA deacylase-like superfamily CDA09_15975 ef7e569f721a14785d85277ba878c3cf 149 Hamap MF_00518 D-aminoacyl-tRNA deacylase [dtd]. 1 145 33.58 T 01-11-2018 IPR003732 D-aminoacyl-tRNA deacylase DTD GO:0002161|GO:0005737|GO:0051499 CDA09_15975 ef7e569f721a14785d85277ba878c3cf 149 Pfam PF02580 D-Tyr-tRNA(Tyr) deacylase 3 142 4.8E-54 T 01-11-2018 IPR003732 D-aminoacyl-tRNA deacylase DTD GO:0002161|GO:0005737|GO:0051499 CDA09_03120 ff46fe4ee11c3804d600c81669f1fff3 306 SUPERFAMILY SSF46785 3 86 3.25E-20 T 01-11-2018 IPR036390 Winged helix DNA-binding domain superfamily CDA09_03120 ff46fe4ee11c3804d600c81669f1fff3 306 Pfam PF03466 LysR substrate binding domain 88 294 3.7E-34 T 01-11-2018 IPR005119 LysR, substrate-binding CDA09_03120 ff46fe4ee11c3804d600c81669f1fff3 306 Gene3D G3DSA:1.10.10.10 2 91 7.9E-25 T 01-11-2018 IPR036388 Winged helix-like DNA-binding domain superfamily CDA09_03120 ff46fe4ee11c3804d600c81669f1fff3 306 SUPERFAMILY SSF53850 89 298 8.22E-37 T 01-11-2018 CDA09_03120 ff46fe4ee11c3804d600c81669f1fff3 306 Gene3D G3DSA:3.40.190.290 92 295 3.4E-48 T 01-11-2018 CDA09_03120 ff46fe4ee11c3804d600c81669f1fff3 306 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 4 63 1.3E-15 T 01-11-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 CDA09_05035 461cdc7d61fdd73f1b6907cd4133444b 816 Hamap MF_01411 LPS-assembly protein LptD [lptD]. 8 785 18.888 T 01-11-2018 IPR020889 LPS-assembly protein LptD GO:0009279|GO:0010033|GO:0015920|GO:0043165 CDA09_05035 461cdc7d61fdd73f1b6907cd4133444b 816 Pfam PF04453 Organic solvent tolerance protein 359 725 1.6E-97 T 01-11-2018 IPR007543 Organic solvent tolerance protein, C-terminal GO:0010033|GO:0019867|GO:0061024 CDA09_13865 8c0c28906430485b4e7b404dd9d42cde 424 Gene3D G3DSA:1.20.140.10 247 399 1.0E-28 T 01-11-2018 CDA09_13865 8c0c28906430485b4e7b404dd9d42cde 424 Pfam PF00441 Acyl-CoA dehydrogenase, C-terminal domain 244 393 2.9E-27 T 01-11-2018 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal GO:0016627|GO:0055114 CDA09_13865 8c0c28906430485b4e7b404dd9d42cde 424 Gene3D G3DSA:1.10.540.10 1 130 1.4E-32 T 01-11-2018 IPR037069 Acyl-CoA dehydrogenase/oxidase, N-terminal domain superfamily GO:0016627|GO:0050660|GO:0055114 CDA09_13865 8c0c28906430485b4e7b404dd9d42cde 424 SUPERFAMILY SSF56645 3 254 1.22E-63 T 01-11-2018 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain superfamily GO:0016627|GO:0055114 CDA09_13865 8c0c28906430485b4e7b404dd9d42cde 424 Gene3D G3DSA:2.40.110.10 132 246 1.7E-33 T 01-11-2018 CDA09_13865 8c0c28906430485b4e7b404dd9d42cde 424 SUPERFAMILY SSF47203 240 397 2.42E-35 T 01-11-2018 IPR036250 Acyl-CoA dehydrogenase-like, C-terminal GO:0016627|GO:0055114 CDA09_13865 8c0c28906430485b4e7b404dd9d42cde 424 Pfam PF02771 Acyl-CoA dehydrogenase, N-terminal domain 10 127 4.0E-14 T 01-11-2018 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal GO:0016627|GO:0050660|GO:0055114 CDA09_13865 8c0c28906430485b4e7b404dd9d42cde 424 Pfam PF02770 Acyl-CoA dehydrogenase, middle domain 133 210 2.4E-21 T 01-11-2018 IPR006091 Acyl-CoA oxidase/dehydrogenase, central domain GO:0016627|GO:0055114 CDA09_10535 6091f9134c65faeb4be5c44f0b491bd2 330 Gene3D G3DSA:3.20.20.100 1 329 7.4E-111 T 01-11-2018 IPR036812 NADP-dependent oxidoreductase domain superfamily CDA09_10535 6091f9134c65faeb4be5c44f0b491bd2 330 SUPERFAMILY SSF51430 3 314 2.88E-97 T 01-11-2018 IPR036812 NADP-dependent oxidoreductase domain superfamily CDA09_10535 6091f9134c65faeb4be5c44f0b491bd2 330 Pfam PF00248 Aldo/keto reductase family 15 308 1.5E-73 T 01-11-2018 IPR023210 NADP-dependent oxidoreductase domain CDA09_21865 26745d5fcbd6f5de9d49243938ca75fc 268 SUPERFAMILY SSF46689 61 141 1.18E-18 T 01-11-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 CDA09_21865 26745d5fcbd6f5de9d49243938ca75fc 268 Pfam PF00440 Bacterial regulatory proteins, tetR family 72 115 6.0E-15 T 01-11-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 CDA09_21865 26745d5fcbd6f5de9d49243938ca75fc 268 ProSitePatterns PS01081 TetR-type HTH domain signature. 84 115 - T 01-11-2018 IPR023772 DNA-binding HTH domain, TetR-type, conserved site CDA09_21865 26745d5fcbd6f5de9d49243938ca75fc 268 Gene3D G3DSA:1.10.357.10 55 268 3.3E-87 T 01-11-2018 CDA09_21865 26745d5fcbd6f5de9d49243938ca75fc 268 SUPERFAMILY SSF48498 144 256 3.14E-14 T 01-11-2018 IPR036271 Tetracyclin repressor-like, C-terminal domain superfamily CDA09_21865 26745d5fcbd6f5de9d49243938ca75fc 268 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 72 85 3.7E-11 T 01-11-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 CDA09_21865 26745d5fcbd6f5de9d49243938ca75fc 268 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 93 116 3.7E-11 T 01-11-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 CDA09_06390 98cad35fa821f000abd4756a17a5ee94 282 Gene3D G3DSA:3.60.21.10 3 239 5.3E-20 T 01-11-2018 IPR029052 Metallo-dependent phosphatase-like CDA09_06390 98cad35fa821f000abd4756a17a5ee94 282 SUPERFAMILY SSF56300 3 242 2.19E-30 T 01-11-2018 CDA09_06390 98cad35fa821f000abd4756a17a5ee94 282 Pfam PF00149 Calcineurin-like phosphoesterase 7 205 2.2E-13 T 01-11-2018 IPR004843 Calcineurin-like phosphoesterase domain, ApaH type GO:0016787 CDA09_02575 cd85aa081901cbddb8abe216c0c96d86 385 SUPERFAMILY SSF53756 15 373 1.78E-63 T 01-11-2018 CDA09_02575 cd85aa081901cbddb8abe216c0c96d86 385 Pfam PF13439 Glycosyltransferase Family 4 24 184 9.8E-14 T 01-11-2018 IPR028098 Glycosyltransferase subfamily 4-like, N-terminal domain Reactome: R-HSA-446193|Reactome: R-HSA-4549349 CDA09_02575 cd85aa081901cbddb8abe216c0c96d86 385 Gene3D G3DSA:3.40.50.2000 200 365 3.9E-35 T 01-11-2018 CDA09_02575 cd85aa081901cbddb8abe216c0c96d86 385 Pfam PF00534 Glycosyl transferases group 1 207 348 1.3E-26 T 01-11-2018 IPR001296 Glycosyl transferase, family 1 CDA09_02575 cd85aa081901cbddb8abe216c0c96d86 385 Gene3D G3DSA:3.40.50.2000 15 198 2.6E-12 T 01-11-2018 CDA09_09985 75bcc6613addfa824194dce8f397ae85 306 SUPERFAMILY SSF52096 35 280 1.09E-62 T 01-11-2018 IPR029045 ClpP/crotonase-like domain superfamily CDA09_09985 75bcc6613addfa824194dce8f397ae85 306 Pfam PF00378 Enoyl-CoA hydratase/isomerase 40 280 1.7E-55 T 01-11-2018 IPR001753 Enoyl-CoA hydratase/isomerase GO:0003824 CDA09_09985 75bcc6613addfa824194dce8f397ae85 306 Gene3D G3DSA:3.90.226.10 8 226 1.7E-58 T 01-11-2018 CDA09_16085 68acb79038d7375d66e8b4463ea6dbc0 317 SMART SM00342 222 308 6.0E-22 T 01-11-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 CDA09_16085 68acb79038d7375d66e8b4463ea6dbc0 317 SUPERFAMILY SSF46689 259 310 2.79E-5 T 01-11-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 CDA09_16085 68acb79038d7375d66e8b4463ea6dbc0 317 ProSitePatterns PS00041 Bacterial regulatory proteins, araC family signature. 259 304 - T 01-11-2018 IPR018062 HTH domain AraC-type, conserved site GO:0003700|GO:0006355|GO:0043565 CDA09_16085 68acb79038d7375d66e8b4463ea6dbc0 317 Gene3D G3DSA:1.10.10.60 206 313 8.1E-36 T 01-11-2018 CDA09_16085 68acb79038d7375d66e8b4463ea6dbc0 317 Pfam PF12833 Helix-turn-helix domain 228 310 5.0E-26 T 01-11-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 CDA09_16085 68acb79038d7375d66e8b4463ea6dbc0 317 SUPERFAMILY SSF46689 208 256 7.98E-8 T 01-11-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 CDA09_11460 0c2e1262a8c256b42c7ad17cc75986e4 235 Gene3D G3DSA:3.20.20.70 1 235 1.5E-35 T 01-11-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 CDA09_11460 0c2e1262a8c256b42c7ad17cc75986e4 235 SUPERFAMILY SSF51366 1 232 3.94E-27 T 01-11-2018 IPR011060 Ribulose-phosphate binding barrel GO:0003824 CDA09_11460 0c2e1262a8c256b42c7ad17cc75986e4 235 Pfam PF00977 Histidine biosynthesis protein 3 227 2.1E-18 T 01-11-2018 IPR006062 Histidine biosynthesis GO:0000105 CDA09_13540 e3bdca196d75925b959a1fee4f19b477 390 SUPERFAMILY SSF103473 3 382 1.57E-57 T 01-11-2018 IPR036259 MFS transporter superfamily CDA09_13540 e3bdca196d75925b959a1fee4f19b477 390 TIGRFAM TIGR00710 efflux_Bcr_CflA: drug resistance transporter, Bcr/CflA subfamily 1 376 8.7E-74 T 01-11-2018 IPR004812 Drug resistance transporter Bcr/CmlA subfamily GO:0006855|GO:0015238|GO:0016021 CDA09_13540 e3bdca196d75925b959a1fee4f19b477 390 Gene3D G3DSA:1.20.1720.10 1 378 6.0E-91 T 01-11-2018 CDA09_13540 e3bdca196d75925b959a1fee4f19b477 390 Pfam PF07690 Major Facilitator Superfamily 6 338 4.6E-40 T 01-11-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 CDA09_17585 72a614912c93ba052dc10fdb22e776cd 439 Gene3D G3DSA:2.30.40.10 8 425 1.6E-157 T 01-11-2018 IPR011059 Metal-dependent hydrolase, composite domain superfamily GO:0016810 CDA09_17585 72a614912c93ba052dc10fdb22e776cd 439 SUPERFAMILY SSF51556 64 363 4.77E-99 T 01-11-2018 IPR032466 Metal-dependent hydrolase CDA09_17585 72a614912c93ba052dc10fdb22e776cd 439 Gene3D G3DSA:3.20.20.140 65 355 1.6E-157 T 01-11-2018 CDA09_17585 72a614912c93ba052dc10fdb22e776cd 439 SUPERFAMILY SSF51338 6 417 8.88E-21 T 01-11-2018 IPR011059 Metal-dependent hydrolase, composite domain superfamily GO:0016810 CDA09_17585 72a614912c93ba052dc10fdb22e776cd 439 Pfam PF01979 Amidohydrolase family 61 410 2.7E-76 T 01-11-2018 IPR006680 Amidohydrolase-related GO:0016787 CDA09_13105 8e4b2ec81b91f97382f270b1b28b9a2b 519 Pfam PF02696 Uncharacterized ACR, YdiU/UPF0061 family 22 483 1.7E-137 T 01-11-2018 IPR003846 Uncharacterised protein family UPF0061 CDA09_13105 8e4b2ec81b91f97382f270b1b28b9a2b 519 Hamap MF_00692 UPF0061 protein YdiU [ydiU]. 2 501 44.343 T 01-11-2018 IPR003846 Uncharacterised protein family UPF0061 CDA09_13630 d1005e68e9fda00eb44df41efbda7b85 247 Pfam PF11136 Protein of unknown function (DUF2889) 26 103 1.2E-8 T 01-11-2018 IPR021312 Protein of unknown function DUF2889 CDA09_09570 70aeb942b4d9ca10a5ebd7e5d55bcab9 292 Gene3D G3DSA:3.30.450.20 173 292 2.2E-16 T 01-11-2018 CDA09_09570 70aeb942b4d9ca10a5ebd7e5d55bcab9 292 SMART SM01049 163 241 0.078 T 01-11-2018 IPR033480 Single Cache domain 2 CDA09_09570 70aeb942b4d9ca10a5ebd7e5d55bcab9 292 SMART SM01049 5 113 8.8E-6 T 01-11-2018 IPR033480 Single Cache domain 2 CDA09_09570 70aeb942b4d9ca10a5ebd7e5d55bcab9 292 Gene3D G3DSA:3.30.450.20 31 172 1.3E-18 T 01-11-2018 CDA09_09570 70aeb942b4d9ca10a5ebd7e5d55bcab9 292 Pfam PF17200 Single Cache domain 2 37 147 1.0E-15 T 01-11-2018 IPR033480 Single Cache domain 2 CDA09_09570 70aeb942b4d9ca10a5ebd7e5d55bcab9 292 Pfam PF17200 Single Cache domain 2 199 287 3.6E-14 T 01-11-2018 IPR033480 Single Cache domain 2 CDA09_05680 36bf973f85b0844107ba4faebe29b2b4 430 Pfam PF01979 Amidohydrolase family 65 424 2.4E-64 T 01-11-2018 IPR006680 Amidohydrolase-related GO:0016787 CDA09_05680 36bf973f85b0844107ba4faebe29b2b4 430 Gene3D G3DSA:3.20.20.140 68 385 2.2E-178 T 01-11-2018 CDA09_05680 36bf973f85b0844107ba4faebe29b2b4 430 SUPERFAMILY SSF51556 67 370 3.15E-101 T 01-11-2018 IPR032466 Metal-dependent hydrolase CDA09_05680 36bf973f85b0844107ba4faebe29b2b4 430 SUPERFAMILY SSF51338 11 82 3.64E-10 T 01-11-2018 IPR011059 Metal-dependent hydrolase, composite domain superfamily GO:0016810 CDA09_05680 36bf973f85b0844107ba4faebe29b2b4 430 Gene3D G3DSA:2.30.40.10 4 421 2.2E-178 T 01-11-2018 IPR011059 Metal-dependent hydrolase, composite domain superfamily GO:0016810 CDA09_05680 36bf973f85b0844107ba4faebe29b2b4 430 TIGRFAM TIGR02967 guan_deamin: guanine deaminase 23 423 1.6E-177 T 01-11-2018 IPR014311 Guanine deaminase GO:0006147|GO:0008270|GO:0008892 KEGG: 00230+3.5.4.3|MetaCyc: PWY-5497|MetaCyc: PWY-6606|MetaCyc: PWY-6608|MetaCyc: PWY-7442|Reactome: R-HSA-74259 CDA09_18340 22e1976566f99543e13aa0ff63093fd1 265 SUPERFAMILY SSF56300 1 256 5.38E-53 T 01-11-2018 CDA09_18340 22e1976566f99543e13aa0ff63093fd1 265 Pfam PF00149 Calcineurin-like phosphoesterase 2 76 6.1E-11 T 01-11-2018 IPR004843 Calcineurin-like phosphoesterase domain, ApaH type GO:0016787 CDA09_18340 22e1976566f99543e13aa0ff63093fd1 265 Gene3D G3DSA:3.60.21.10 1 265 1.2E-72 T 01-11-2018 IPR029052 Metallo-dependent phosphatase-like CDA09_18340 22e1976566f99543e13aa0ff63093fd1 265 Hamap MF_00199 Bis(5'-nucleosyl)-tetraphosphatase, symmetrical [apaH]. 1 265 43.343 T 01-11-2018 IPR004617 Bis(5'-nucleosyl)-tetraphosphatase (symmetrical) GO:0008803 KEGG: 00230+3.6.1.41 CDA09_18340 22e1976566f99543e13aa0ff63093fd1 265 PIRSF PIRSF000903 1 265 5.2E-103 T 01-11-2018 IPR004617 Bis(5'-nucleosyl)-tetraphosphatase (symmetrical) GO:0008803 KEGG: 00230+3.6.1.41 CDA09_18340 22e1976566f99543e13aa0ff63093fd1 265 TIGRFAM TIGR00668 apaH: bis(5'-nucleosyl)-tetraphosphatase (symmetrical) 1 262 2.9E-82 T 01-11-2018 IPR004617 Bis(5'-nucleosyl)-tetraphosphatase (symmetrical) GO:0008803 KEGG: 00230+3.6.1.41 CDA09_03365 a0b03e5f36ed66055164853b6114778c 294 Pfam PF00892 EamA-like transporter family 141 269 1.5E-6 T 01-11-2018 IPR000620 EamA domain GO:0016020|GO:0016021 CDA09_03365 a0b03e5f36ed66055164853b6114778c 294 Pfam PF00892 EamA-like transporter family 4 131 2.6E-14 T 01-11-2018 IPR000620 EamA domain GO:0016020|GO:0016021 CDA09_03365 a0b03e5f36ed66055164853b6114778c 294 SUPERFAMILY SSF103481 35 133 9.55E-16 T 01-11-2018 CDA09_03365 a0b03e5f36ed66055164853b6114778c 294 SUPERFAMILY SSF103481 176 277 1.7E-10 T 01-11-2018 CDA09_03625 6b493dda93b84256e2b547c2d7281a61 180 Gene3D G3DSA:1.25.40.10 8 143 3.2E-6 T 01-11-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 CDA09_03625 6b493dda93b84256e2b547c2d7281a61 180 SUPERFAMILY SSF48452 11 78 1.18E-8 T 01-11-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 CDA09_16250 8d7b6d6e230ea079e60c92039164d22d 287 SMART SM00382 63 275 1.4E-10 T 01-11-2018 IPR003593 AAA+ ATPase domain CDA09_16250 8d7b6d6e230ea079e60c92039164d22d 287 TIGRFAM TIGR00972 3a0107s01c2: phosphate ABC transporter, ATP-binding protein 40 287 1.6E-114 T 01-11-2018 IPR005670 Phosphate transport system permease protein 1 GO:0005315|GO:0016020|GO:0035435 CDA09_16250 8d7b6d6e230ea079e60c92039164d22d 287 Pfam PF00005 ABC transporter 54 212 5.5E-29 T 01-11-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 CDA09_16250 8d7b6d6e230ea079e60c92039164d22d 287 ProSitePatterns PS00211 ABC transporters family signature. 184 198 - T 01-11-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 CDA09_16250 8d7b6d6e230ea079e60c92039164d22d 287 SUPERFAMILY SSF52540 41 280 4.76E-58 T 01-11-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CDA09_16250 8d7b6d6e230ea079e60c92039164d22d 287 Gene3D G3DSA:3.40.50.300 39 285 1.5E-63 T 01-11-2018 CDA09_17515 901e63e8348649a59995ffd15d8a4c35 267 ProSitePatterns PS00839 Uroporphyrin-III C-methyltransferase signature 1. 21 35 - T 01-11-2018 IPR003043 Uroporphiryn-III C-methyltransferase, conserved site GO:0008168|GO:0055114 KEGG: 00860+4.99.1.4+1.3.1.76+2.1.1.107|MetaCyc: PWY-5194|MetaCyc: PWY-5196|MetaCyc: PWY-7377 CDA09_17515 901e63e8348649a59995ffd15d8a4c35 267 ProSitePatterns PS00840 Uroporphyrin-III C-methyltransferase signature 2. 96 129 - T 01-11-2018 IPR003043 Uroporphiryn-III C-methyltransferase, conserved site GO:0008168|GO:0055114 KEGG: 00860+4.99.1.4+1.3.1.76+2.1.1.107|MetaCyc: PWY-5194|MetaCyc: PWY-5196|MetaCyc: PWY-7377 CDA09_17515 901e63e8348649a59995ffd15d8a4c35 267 Pfam PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases 17 227 4.2E-47 T 01-11-2018 IPR000878 Tetrapyrrole methylase GO:0008168 Reactome: R-HSA-5358493 CDA09_17515 901e63e8348649a59995ffd15d8a4c35 267 SUPERFAMILY SSF53790 13 251 9.95E-76 T 01-11-2018 IPR035996 Tetrapyrrole methylase superfamily GO:0008168 Reactome: R-HSA-5358493 CDA09_17515 901e63e8348649a59995ffd15d8a4c35 267 TIGRFAM TIGR01469 cobA_cysG_Cterm: uroporphyrinogen-III C-methyltransferase 16 251 2.2E-88 T 01-11-2018 IPR006366 Uroporphyrin-III C-methyltransferase GO:0008168|GO:0019354 KEGG: 00860+4.99.1.4+1.3.1.76+2.1.1.107|MetaCyc: PWY-5194|MetaCyc: PWY-5196|MetaCyc: PWY-7377 CDA09_17515 901e63e8348649a59995ffd15d8a4c35 267 Gene3D G3DSA:3.30.950.10 132 262 2.6E-43 T 01-11-2018 IPR014776 Tetrapyrrole methylase, subdomain 2 GO:0008168 Reactome: R-HSA-5358493 CDA09_17515 901e63e8348649a59995ffd15d8a4c35 267 Gene3D G3DSA:3.40.1010.10 15 131 3.5E-43 T 01-11-2018 IPR014777 Tetrapyrrole methylase, subdomain 1 GO:0008168 Reactome: R-HSA-5358493 CDA09_01600 090bd8a63bdd0b831925618d487b49d7 392 SUPERFAMILY SSF56935 39 366 3.66E-32 T 01-11-2018 CDA09_01600 090bd8a63bdd0b831925618d487b49d7 392 Pfam PF13609 Gram-negative porin 27 370 5.7E-25 T 01-11-2018 CDA09_01600 090bd8a63bdd0b831925618d487b49d7 392 Gene3D G3DSA:2.40.160.10 36 388 4.8E-21 T 01-11-2018 IPR023614 Porin domain superfamily CDA09_16130 05986f96d231a29ccea01ccc7c253ca8 174 TIGRFAM TIGR00072 hydrog_prot: hydrogenase maturation protease 8 145 8.2E-19 T 01-11-2018 IPR000671 Peptidase A31 family GO:0008047|GO:0008233 CDA09_16130 05986f96d231a29ccea01ccc7c253ca8 174 Gene3D G3DSA:3.40.50.1450 5 151 1.2E-24 T 01-11-2018 IPR023430 Peptidase HybD-like domain superfamily CDA09_16130 05986f96d231a29ccea01ccc7c253ca8 174 SUPERFAMILY SSF53163 6 148 1.67E-24 T 01-11-2018 IPR023430 Peptidase HybD-like domain superfamily CDA09_13165 6a1c7c81e10427bdca3e5b91e8f69095 439 SUPERFAMILY SSF56059 120 410 3.57E-8 T 01-11-2018 CDA09_10065 e6adab197ca64a7025d62ab953f16f24 307 Gene3D G3DSA:3.20.20.30 3 307 7.6E-72 T 01-11-2018 IPR036661 Luciferase-like domain superfamily GO:0016705|GO:0055114 CDA09_10065 e6adab197ca64a7025d62ab953f16f24 307 Pfam PF00296 Luciferase-like monooxygenase 24 244 2.2E-45 T 01-11-2018 IPR011251 Luciferase-like domain GO:0016705|GO:0055114 CDA09_10065 e6adab197ca64a7025d62ab953f16f24 307 SUPERFAMILY SSF51679 13 307 1.15E-62 T 01-11-2018 IPR036661 Luciferase-like domain superfamily GO:0016705|GO:0055114 CDA09_10065 e6adab197ca64a7025d62ab953f16f24 307 TIGRFAM TIGR03619 F420_Rv2161c: probable F420-dependent oxidoreductase, Rv2161c family 31 280 1.3E-61 T 01-11-2018 IPR019921 Luciferase-like, F420-dependent oxidoreductase, Rv2161c, predicted CDA09_10635 157b125601216e904917d44a7f25c2b6 235 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 111 124 5.1E-36 T 01-11-2018 IPR006439 HAD hydrolase, subfamily IA GO:0016787 CDA09_10635 157b125601216e904917d44a7f25c2b6 235 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 142 158 5.1E-36 T 01-11-2018 IPR006439 HAD hydrolase, subfamily IA GO:0016787 CDA09_10635 157b125601216e904917d44a7f25c2b6 235 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 49 62 5.1E-36 T 01-11-2018 IPR006439 HAD hydrolase, subfamily IA GO:0016787 CDA09_10635 157b125601216e904917d44a7f25c2b6 235 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 35 48 5.1E-36 T 01-11-2018 IPR006439 HAD hydrolase, subfamily IA GO:0016787 CDA09_10635 157b125601216e904917d44a7f25c2b6 235 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 187 200 5.1E-36 T 01-11-2018 IPR006439 HAD hydrolase, subfamily IA GO:0016787 CDA09_10635 157b125601216e904917d44a7f25c2b6 235 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 9 20 5.1E-36 T 01-11-2018 IPR006439 HAD hydrolase, subfamily IA GO:0016787 CDA09_10635 157b125601216e904917d44a7f25c2b6 235 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 160 180 5.1E-36 T 01-11-2018 IPR006439 HAD hydrolase, subfamily IA GO:0016787 CDA09_10635 157b125601216e904917d44a7f25c2b6 235 Gene3D G3DSA:1.10.150.240 23 96 6.0E-72 T 01-11-2018 IPR023198 Phosphoglycolate phosphatase-like, domain 2 CDA09_10635 157b125601216e904917d44a7f25c2b6 235 Pfam PF13419 Haloacid dehalogenase-like hydrolase 97 197 1.5E-16 T 01-11-2018 CDA09_10635 157b125601216e904917d44a7f25c2b6 235 Gene3D G3DSA:3.40.50.1000 11 219 6.0E-72 T 01-11-2018 IPR023214 HAD superfamily CDA09_10635 157b125601216e904917d44a7f25c2b6 235 SUPERFAMILY SSF56784 7 220 6.89E-50 T 01-11-2018 IPR036412 HAD-like superfamily CDA09_10635 157b125601216e904917d44a7f25c2b6 235 TIGRFAM TIGR01493 HAD-SF-IA-v2: HAD hydrolase, family IA, variant 2 12 190 3.4E-32 T 01-11-2018 IPR006439 HAD hydrolase, subfamily IA GO:0016787 CDA09_10635 157b125601216e904917d44a7f25c2b6 235 TIGRFAM TIGR01428 HAD_type_II: haloacid dehalogenase, type II 9 204 1.6E-65 T 01-11-2018 IPR006328 L-2-Haloacid dehalogenase GO:0019120 KEGG: 00361+3.8.1.2|KEGG: 00625+3.8.1.2|MetaCyc: PWY-7425 CDA09_19235 7d9458d907ae732ad0c8565d42c2dc2a 217 Pfam PF00596 Class II Aldolase and Adducin N-terminal domain 12 185 6.9E-50 T 01-11-2018 IPR001303 Class II aldolase/adducin N-terminal CDA09_19235 7d9458d907ae732ad0c8565d42c2dc2a 217 SMART SM01007 11 185 5.0E-64 T 01-11-2018 IPR001303 Class II aldolase/adducin N-terminal CDA09_19235 7d9458d907ae732ad0c8565d42c2dc2a 217 Gene3D G3DSA:3.40.225.10 6 216 3.9E-69 T 01-11-2018 IPR036409 Class II aldolase/adducin N-terminal domain superfamily CDA09_19235 7d9458d907ae732ad0c8565d42c2dc2a 217 SUPERFAMILY SSF53639 8 214 7.26E-64 T 01-11-2018 IPR036409 Class II aldolase/adducin N-terminal domain superfamily CDA09_16395 42d699dd54b673657039527627b69f1c 507 Pfam PF13522 Glutamine amidotransferase domain 67 210 7.2E-16 T 01-11-2018 CDA09_16395 42d699dd54b673657039527627b69f1c 507 Hamap MF_01931 Amidophosphoribosyltransferase [purF]. 1 466 45.268 T 01-11-2018 IPR005854 Amidophosphoribosyltransferase GO:0004044|GO:0009113 KEGG: 00230+2.4.2.14|KEGG: 00250+2.4.2.14|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|MetaCyc: PWY-7282|Reactome: R-HSA-73817 CDA09_16395 42d699dd54b673657039527627b69f1c 507 Gene3D G3DSA:3.60.20.10 2 414 7.6E-149 T 01-11-2018 IPR029055 Nucleophile aminohydrolases, N-terminal CDA09_16395 42d699dd54b673657039527627b69f1c 507 TIGRFAM TIGR01134 purF: amidophosphoribosyltransferase 2 466 1.3E-156 T 01-11-2018 IPR005854 Amidophosphoribosyltransferase GO:0004044|GO:0009113 KEGG: 00230+2.4.2.14|KEGG: 00250+2.4.2.14|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|MetaCyc: PWY-7282|Reactome: R-HSA-73817 CDA09_16395 42d699dd54b673657039527627b69f1c 507 SUPERFAMILY SSF53271 252 484 7.03E-71 T 01-11-2018 IPR029057 Phosphoribosyltransferase-like CDA09_16395 42d699dd54b673657039527627b69f1c 507 PIRSF PIRSF000485 1 483 1.8E-156 T 01-11-2018 IPR005854 Amidophosphoribosyltransferase GO:0004044|GO:0009113 KEGG: 00230+2.4.2.14|KEGG: 00250+2.4.2.14|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|MetaCyc: PWY-7282|Reactome: R-HSA-73817 CDA09_16395 42d699dd54b673657039527627b69f1c 507 SUPERFAMILY SSF56235 2 259 3.26E-68 T 01-11-2018 IPR029055 Nucleophile aminohydrolases, N-terminal CDA09_16395 42d699dd54b673657039527627b69f1c 507 Pfam PF00156 Phosphoribosyl transferase domain 294 395 9.1E-9 T 01-11-2018 IPR000836 Phosphoribosyltransferase domain GO:0009116 CDA09_16395 42d699dd54b673657039527627b69f1c 507 Gene3D G3DSA:3.40.50.2020 279 443 7.6E-149 T 01-11-2018 CDA09_20335 81752dd8136f4c1cc557455f516721fa 171 PIRSF PIRSF016481 1 167 2.1E-43 T 01-11-2018 IPR007446 Pilus assembly protein PilP CDA09_20335 81752dd8136f4c1cc557455f516721fa 171 Pfam PF04351 Pilus assembly protein, PilP 22 163 3.4E-47 T 01-11-2018 IPR007446 Pilus assembly protein PilP CDA09_20335 81752dd8136f4c1cc557455f516721fa 171 Gene3D G3DSA:2.30.30.830 73 164 2.4E-31 T 01-11-2018 CDA09_05815 e6ef8abf764ef394268d8b63ff0fe7bf 566 Gene3D G3DSA:3.30.1120.10 470 548 2.3E-20 T 01-11-2018 CDA09_05815 e6ef8abf764ef394268d8b63ff0fe7bf 566 Pfam PF00884 Sulfatase 40 438 6.7E-66 T 01-11-2018 IPR000917 Sulfatase, N-terminal GO:0008484 CDA09_05815 e6ef8abf764ef394268d8b63ff0fe7bf 566 ProSitePatterns PS00149 Sulfatases signature 2. 140 150 - T 01-11-2018 IPR024607 Sulfatase, conserved site CDA09_05815 e6ef8abf764ef394268d8b63ff0fe7bf 566 Gene3D G3DSA:3.40.720.10 37 466 2.1E-128 T 01-11-2018 IPR017849 Alkaline phosphatase-like, alpha/beta/alpha GO:0003824 CDA09_05815 e6ef8abf764ef394268d8b63ff0fe7bf 566 SUPERFAMILY SSF53649 39 543 8.0E-136 T 01-11-2018 IPR017850 Alkaline-phosphatase-like, core domain superfamily GO:0003824 CDA09_12310 481c330cf7b6c6c34f89f12291a31bf6 541 Gene3D G3DSA:3.50.50.60 464 532 6.4E-15 T 01-11-2018 IPR036188 FAD/NAD(P)-binding domain superfamily CDA09_12310 481c330cf7b6c6c34f89f12291a31bf6 541 Gene3D G3DSA:3.50.50.60 85 299 4.0E-86 T 01-11-2018 IPR036188 FAD/NAD(P)-binding domain superfamily CDA09_12310 481c330cf7b6c6c34f89f12291a31bf6 541 SUPERFAMILY SSF51905 100 528 1.21E-35 T 01-11-2018 IPR036188 FAD/NAD(P)-binding domain superfamily CDA09_12310 481c330cf7b6c6c34f89f12291a31bf6 541 PIRSF PIRSF038984 1 533 1.2E-243 T 01-11-2018 IPR028348 FAD dependent protein CDA09_12310 481c330cf7b6c6c34f89f12291a31bf6 541 Gene3D G3DSA:3.30.70.2700 1 80 1.9E-26 T 01-11-2018 CDA09_01360 daa49937d56a4f03dafe0edd21257095 516 SMART SM00387 398 511 8.0E-25 T 01-11-2018 IPR003594 Histidine kinase/HSP90-like ATPase CDA09_01360 daa49937d56a4f03dafe0edd21257095 516 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 401 510 2.9E-18 T 01-11-2018 IPR003594 Histidine kinase/HSP90-like ATPase CDA09_01360 daa49937d56a4f03dafe0edd21257095 516 SMART SM00388 286 356 8.2E-5 T 01-11-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 CDA09_01360 daa49937d56a4f03dafe0edd21257095 516 Gene3D G3DSA:1.20.1480.50 185 275 5.4E-9 T 01-11-2018 CDA09_01360 daa49937d56a4f03dafe0edd21257095 516 Gene3D G3DSA:1.10.287.130 279 354 4.5E-14 T 01-11-2018 CDA09_01360 daa49937d56a4f03dafe0edd21257095 516 SUPERFAMILY SSF158472 219 266 2.09E-7 T 01-11-2018 CDA09_01360 daa49937d56a4f03dafe0edd21257095 516 Gene3D G3DSA:3.30.565.10 358 514 3.6E-38 T 01-11-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily CDA09_01360 daa49937d56a4f03dafe0edd21257095 516 SUPERFAMILY SSF55874 356 509 7.07E-37 T 01-11-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily CDA09_01360 daa49937d56a4f03dafe0edd21257095 516 SMART SM00304 217 269 5.9E-9 T 01-11-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 CDA09_01360 daa49937d56a4f03dafe0edd21257095 516 Pfam PF00672 HAMP domain 223 265 1.3E-6 T 01-11-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 CDA09_01360 daa49937d56a4f03dafe0edd21257095 516 SUPERFAMILY SSF47384 280 356 1.2E-7 T 01-11-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 CDA09_01360 daa49937d56a4f03dafe0edd21257095 516 PRINTS PR00344 Bacterial sensor protein C-terminal signature 440 454 1.9E-15 T 01-11-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 CDA09_01360 daa49937d56a4f03dafe0edd21257095 516 PRINTS PR00344 Bacterial sensor protein C-terminal signature 471 489 1.9E-15 T 01-11-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 CDA09_01360 daa49937d56a4f03dafe0edd21257095 516 PRINTS PR00344 Bacterial sensor protein C-terminal signature 495 508 1.9E-15 T 01-11-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 CDA09_01360 daa49937d56a4f03dafe0edd21257095 516 PRINTS PR00344 Bacterial sensor protein C-terminal signature 458 468 1.9E-15 T 01-11-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 CDA09_01360 daa49937d56a4f03dafe0edd21257095 516 Pfam PF00512 His Kinase A (phospho-acceptor) domain 288 355 8.5E-8 T 01-11-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 CDA09_20925 af7d83ea5f2b9e0f14f4be67ce9331cd 284 Gene3D G3DSA:2.60.200.20 173 281 5.5E-14 T 01-11-2018 CDA09_20925 af7d83ea5f2b9e0f14f4be67ce9331cd 284 SMART SM00240 198 257 7.8E-6 T 01-11-2018 IPR000253 Forkhead-associated (FHA) domain GO:0005515 CDA09_20925 af7d83ea5f2b9e0f14f4be67ce9331cd 284 SUPERFAMILY SSF55073 5 138 2.98E-17 T 01-11-2018 IPR029787 Nucleotide cyclase CDA09_20925 af7d83ea5f2b9e0f14f4be67ce9331cd 284 Pfam PF00498 FHA domain 200 259 1.5E-10 T 01-11-2018 IPR000253 Forkhead-associated (FHA) domain GO:0005515 CDA09_20925 af7d83ea5f2b9e0f14f4be67ce9331cd 284 SUPERFAMILY SSF49879 145 265 4.97E-17 T 01-11-2018 IPR008984 SMAD/FHA domain superfamily GO:0005515 CDA09_20925 af7d83ea5f2b9e0f14f4be67ce9331cd 284 Gene3D G3DSA:3.30.70.1230 2 163 6.3E-13 T 01-11-2018 IPR029787 Nucleotide cyclase CDA09_00910 318bef01ac7df35a92dd0f20c1fb0f32 140 Pfam PF09828 Chromate resistance exported protein 3 136 2.3E-50 T 01-11-2018 IPR018634 Chromate resistance exported protein CDA09_04750 935be24b3067799f0b2b2ff92728ce3e 522 Gene3D G3DSA:3.40.50.12780 3 414 2.4E-109 T 01-11-2018 CDA09_04750 935be24b3067799f0b2b2ff92728ce3e 522 Pfam PF00501 AMP-binding enzyme 14 418 8.6E-91 T 01-11-2018 IPR000873 AMP-dependent synthetase/ligase GO:0003824 CDA09_04750 935be24b3067799f0b2b2ff92728ce3e 522 Gene3D G3DSA:3.30.300.310 415 517 7.6E-34 T 01-11-2018 CDA09_04750 935be24b3067799f0b2b2ff92728ce3e 522 ProSitePatterns PS00455 Putative AMP-binding domain signature. 168 179 - T 01-11-2018 IPR020845 AMP-binding, conserved site CDA09_04750 935be24b3067799f0b2b2ff92728ce3e 522 SUPERFAMILY SSF56801 4 516 1.96E-144 T 01-11-2018 CDA09_04750 935be24b3067799f0b2b2ff92728ce3e 522 Pfam PF13193 AMP-binding enzyme C-terminal domain 427 504 1.1E-20 T 01-11-2018 IPR025110 AMP-binding enzyme, C-terminal domain CDA09_15635 19f8d676d8872b61b823f6937d485425 343 Pfam PF03595 Voltage-dependent anion channel 8 329 3.4E-54 T 01-11-2018 IPR004695 Voltage-dependent anion channel GO:0016021|GO:0055085 CDA09_15635 19f8d676d8872b61b823f6937d485425 343 Gene3D G3DSA:1.50.10.150 2 337 2.2E-12 T 01-11-2018 IPR038665 Voltage-dependent anion channel superfamily CDA09_20440 da11798d643995a8b23e0e54c20c94f4 126 SUPERFAMILY SSF55298 1 125 2.51E-45 T 01-11-2018 IPR035959 RutC-like superfamily Reactome: R-HSA-8849175 CDA09_20440 da11798d643995a8b23e0e54c20c94f4 126 Pfam PF01042 Endoribonuclease L-PSP 9 124 2.2E-38 T 01-11-2018 IPR006175 YjgF/YER057c/UK114 family Reactome: R-HSA-8849175 CDA09_20440 da11798d643995a8b23e0e54c20c94f4 126 TIGRFAM TIGR00004 TIGR00004: reactive intermediate/imine deaminase 4 124 7.8E-50 T 01-11-2018 IPR006056 RidA family Reactome: R-HSA-8849175 CDA09_20440 da11798d643995a8b23e0e54c20c94f4 126 Gene3D G3DSA:3.30.1330.40 3 125 2.8E-51 T 01-11-2018 IPR035959 RutC-like superfamily Reactome: R-HSA-8849175 CDA09_08025 c42d37c54e69783242815fa50b380070 83 SUPERFAMILY SSF54285 4 83 2.04E-12 T 01-11-2018 IPR016155 Molybdopterin synthase/thiamin biosynthesis sulphur carrier, beta-grasp CDA09_08025 c42d37c54e69783242815fa50b380070 83 Pfam PF02597 ThiS family 20 83 1.0E-11 T 01-11-2018 IPR003749 Sulfur carrier ThiS/MoaD-like Reactome: R-HSA-947581 CDA09_08025 c42d37c54e69783242815fa50b380070 83 Gene3D G3DSA:3.10.20.30 1 83 4.5E-12 T 01-11-2018 IPR012675 Beta-grasp domain superfamily CDA09_01435 e38307addf37b0f5df1a12873fa74eb9 114 Gene3D G3DSA:3.90.10.10 20 93 1.2E-18 T 01-11-2018 CDA09_01435 e38307addf37b0f5df1a12873fa74eb9 114 TIGRFAM TIGR04257 nanowire_3heme: c(7)-type cytochrome triheme domain 25 93 4.1E-20 T 01-11-2018 IPR026352 C(7)-type cytochrome triheme domain CDA09_01435 e38307addf37b0f5df1a12873fa74eb9 114 Pfam PF14522 Cytochrome c7 and related cytochrome c 31 93 2.3E-10 T 01-11-2018 IPR029467 C-type polyheme cytochrome OmcB CDA09_01435 e38307addf37b0f5df1a12873fa74eb9 114 SUPERFAMILY SSF48695 21 92 3.14E-16 T 01-11-2018 IPR036280 Multiheme cytochrome superfamily CDA09_09020 12902247ac8e3065964f85612d8fb629 400 Gene3D G3DSA:1.20.1250.20 9 387 2.3E-11 T 01-11-2018 CDA09_09020 12902247ac8e3065964f85612d8fb629 400 SUPERFAMILY SSF103473 9 388 8.63E-18 T 01-11-2018 IPR036259 MFS transporter superfamily CDA09_20525 26f7131abdbe959ad3dcd429cb6e5cf5 135 Gene3D G3DSA:3.10.129.10 4 135 1.2E-37 T 01-11-2018 CDA09_20525 26f7131abdbe959ad3dcd429cb6e5cf5 135 SUPERFAMILY SSF54637 16 134 4.11E-35 T 01-11-2018 IPR029069 HotDog domain superfamily CDA09_20525 26f7131abdbe959ad3dcd429cb6e5cf5 135 Pfam PF03061 Thioesterase superfamily 32 105 2.8E-17 T 01-11-2018 IPR006683 Thioesterase domain Reactome: R-HSA-77289 CDA09_07830 e6947cee9a88af80e6d3bd03248b596b 458 SUPERFAMILY SSF55874 325 444 4.32E-16 T 01-11-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily CDA09_07830 e6947cee9a88af80e6d3bd03248b596b 458 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 361 445 5.9E-6 T 01-11-2018 IPR003594 Histidine kinase/HSP90-like ATPase CDA09_07830 e6947cee9a88af80e6d3bd03248b596b 458 Gene3D G3DSA:1.10.287.130 173 308 2.5E-5 T 01-11-2018 CDA09_07830 e6947cee9a88af80e6d3bd03248b596b 458 Gene3D G3DSA:3.30.565.10 320 445 1.4E-27 T 01-11-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily CDA09_07830 e6947cee9a88af80e6d3bd03248b596b 458 SMART SM00387 355 447 1.9E-7 T 01-11-2018 IPR003594 Histidine kinase/HSP90-like ATPase CDA09_07830 e6947cee9a88af80e6d3bd03248b596b 458 SMART SM00304 175 227 6.8E-8 T 01-11-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 CDA09_07830 e6947cee9a88af80e6d3bd03248b596b 458 Pfam PF07730 Histidine kinase 249 313 5.2E-12 T 01-11-2018 IPR011712 Signal transduction histidine kinase, subgroup 3, dimerisation and phosphoacceptor domain GO:0000155|GO:0000160|GO:0016021|GO:0046983 CDA09_17085 1a1651fb1b732b1938feeb9bdd3132a1 449 Gene3D G3DSA:1.20.1250.20 5 191 1.3E-39 T 01-11-2018 CDA09_17085 1a1651fb1b732b1938feeb9bdd3132a1 449 Pfam PF07690 Major Facilitator Superfamily 14 364 8.6E-44 T 01-11-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 CDA09_17085 1a1651fb1b732b1938feeb9bdd3132a1 449 SUPERFAMILY SSF103473 6 408 9.94E-64 T 01-11-2018 IPR036259 MFS transporter superfamily CDA09_17085 1a1651fb1b732b1938feeb9bdd3132a1 449 Gene3D G3DSA:1.20.1250.20 208 412 7.0E-18 T 01-11-2018 CDA09_11320 d620bbbf35fb8636d16b3cf5bd6679bd 327 Pfam PF08443 RimK-like ATP-grasp domain 113 306 9.2E-14 T 01-11-2018 IPR013651 ATP-grasp fold, RimK-type Reactome: R-HSA-70614 CDA09_11320 d620bbbf35fb8636d16b3cf5bd6679bd 327 SUPERFAMILY SSF56059 115 311 5.3E-35 T 01-11-2018 CDA09_11320 d620bbbf35fb8636d16b3cf5bd6679bd 327 Gene3D G3DSA:3.40.50.20 13 127 4.7E-24 T 01-11-2018 CDA09_11320 d620bbbf35fb8636d16b3cf5bd6679bd 327 Gene3D G3DSA:3.30.470.80 203 311 5.0E-33 T 01-11-2018 CDA09_14315 751629ae32a5f273385033a488ead887 276 Pfam PF02616 Segregation and condensation protein ScpA 58 269 3.9E-30 T 01-11-2018 IPR003768 Segregation and condensation protein A CDA09_14315 751629ae32a5f273385033a488ead887 276 Hamap MF_01805 Segregation and condensation protein A [scpA]. 41 271 20.925 T 01-11-2018 IPR003768 Segregation and condensation protein A CDA09_06770 62a239d3b050473c0e8af5144e498c0c 259 PRINTS PR00953 Type III secretion system inner membrane R protein family signature 180 202 9.3E-30 T 01-11-2018 IPR002010 Type III secretion system inner membrane R protein GO:0006605|GO:0016020 CDA09_06770 62a239d3b050473c0e8af5144e498c0c 259 PRINTS PR00953 Type III secretion system inner membrane R protein family signature 202 221 9.3E-30 T 01-11-2018 IPR002010 Type III secretion system inner membrane R protein GO:0006605|GO:0016020 CDA09_06770 62a239d3b050473c0e8af5144e498c0c 259 PRINTS PR00953 Type III secretion system inner membrane R protein family signature 22 43 9.3E-30 T 01-11-2018 IPR002010 Type III secretion system inner membrane R protein GO:0006605|GO:0016020 CDA09_06770 62a239d3b050473c0e8af5144e498c0c 259 PRINTS PR00953 Type III secretion system inner membrane R protein family signature 81 100 9.3E-30 T 01-11-2018 IPR002010 Type III secretion system inner membrane R protein GO:0006605|GO:0016020 CDA09_06770 62a239d3b050473c0e8af5144e498c0c 259 Pfam PF01311 Bacterial export proteins, family 1 14 245 4.5E-67 T 01-11-2018 IPR002010 Type III secretion system inner membrane R protein GO:0006605|GO:0016020 CDA09_06770 62a239d3b050473c0e8af5144e498c0c 259 TIGRFAM TIGR01400 fliR: flagellar biosynthetic protein FliR 14 254 1.8E-65 T 01-11-2018 IPR006303 Flagellar biosynthesis protein FliR GO:0016021|GO:0044780 CDA09_09475 00d29cd1ea896c1ccf020b2d88cb07c7 272 SUPERFAMILY SSF51735 27 268 1.37E-68 T 01-11-2018 IPR036291 NAD(P)-binding domain superfamily CDA09_09475 00d29cd1ea896c1ccf020b2d88cb07c7 272 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 35 267 6.6E-60 T 01-11-2018 CDA09_09475 00d29cd1ea896c1ccf020b2d88cb07c7 272 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 107 118 2.4E-12 T 01-11-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CDA09_09475 00d29cd1ea896c1ccf020b2d88cb07c7 272 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 160 168 2.4E-12 T 01-11-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CDA09_09475 00d29cd1ea896c1ccf020b2d88cb07c7 272 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 180 199 2.4E-12 T 01-11-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CDA09_09475 00d29cd1ea896c1ccf020b2d88cb07c7 272 Gene3D G3DSA:3.40.50.720 10 268 4.7E-74 T 01-11-2018 CDA09_09475 00d29cd1ea896c1ccf020b2d88cb07c7 272 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 154 170 3.3E-33 T 01-11-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CDA09_09475 00d29cd1ea896c1ccf020b2d88cb07c7 272 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 30 47 3.3E-33 T 01-11-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CDA09_09475 00d29cd1ea896c1ccf020b2d88cb07c7 272 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 180 199 3.3E-33 T 01-11-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CDA09_09475 00d29cd1ea896c1ccf020b2d88cb07c7 272 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 201 218 3.3E-33 T 01-11-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CDA09_09475 00d29cd1ea896c1ccf020b2d88cb07c7 272 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 107 118 3.3E-33 T 01-11-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CDA09_09475 00d29cd1ea896c1ccf020b2d88cb07c7 272 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 235 255 3.3E-33 T 01-11-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CDA09_20660 5a200383e8aeb94ed97f56492a0e3a91 148 TIGRFAM TIGR00051 TIGR00051: acyl-CoA thioester hydrolase, YbgC/YbaW family 19 131 1.2E-34 T 01-11-2018 IPR006684 Acyl-CoA thioester hydrolase YbgC/YbaW family GO:0016787 CDA09_20660 5a200383e8aeb94ed97f56492a0e3a91 148 SUPERFAMILY SSF54637 14 144 1.63E-41 T 01-11-2018 IPR029069 HotDog domain superfamily CDA09_20660 5a200383e8aeb94ed97f56492a0e3a91 148 TIGRFAM TIGR02799 thio_ybgC: tol-pal system-associated acyl-CoA thioesterase 16 139 1.3E-49 T 01-11-2018 IPR014166 Tol-Pal system-associated acyl-CoA thioesterase GO:0016790 CDA09_20660 5a200383e8aeb94ed97f56492a0e3a91 148 PIRSF PIRSF003230 7 148 1.8E-44 T 01-11-2018 IPR006684 Acyl-CoA thioester hydrolase YbgC/YbaW family GO:0016787 CDA09_20660 5a200383e8aeb94ed97f56492a0e3a91 148 Pfam PF03061 Thioesterase superfamily 31 114 3.5E-16 T 01-11-2018 IPR006683 Thioesterase domain Reactome: R-HSA-77289 CDA09_20660 5a200383e8aeb94ed97f56492a0e3a91 148 Gene3D G3DSA:3.10.129.10 10 147 1.6E-42 T 01-11-2018 CDA09_08695 7d4af0ce785bb49fbdf1c78ddc6a12e0 369 PIRSF PIRSF000138 1 368 1.2E-116 T 01-11-2018 IPR012133 Alpha-hydroxy acid dehydrogenase, FMN-dependent GO:0010181|GO:0016491|GO:0055114 Reactome: R-HSA-9033241 CDA09_08695 7d4af0ce785bb49fbdf1c78ddc6a12e0 369 Pfam PF01070 FMN-dependent dehydrogenase 2 365 3.4E-124 T 01-11-2018 IPR000262 FMN-dependent dehydrogenase GO:0016491 Reactome: R-HSA-9033241 CDA09_08695 7d4af0ce785bb49fbdf1c78ddc6a12e0 369 SUPERFAMILY SSF51395 2 363 1.1E-83 T 01-11-2018 CDA09_08695 7d4af0ce785bb49fbdf1c78ddc6a12e0 369 Gene3D G3DSA:3.20.20.70 1 368 2.4E-121 T 01-11-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 CDA09_01300 810028923edc9374565bcb4ff21ec07f 254 PRINTS PR01386 Cytochrome c-type biogenesis protein CcmC signature 50 67 1.7E-40 T 01-11-2018 IPR003557 Cytochrome c-type biogenesis protein CcmC GO:0015232|GO:0015886|GO:0016020|GO:0017004 CDA09_01300 810028923edc9374565bcb4ff21ec07f 254 PRINTS PR01386 Cytochrome c-type biogenesis protein CcmC signature 105 125 1.7E-40 T 01-11-2018 IPR003557 Cytochrome c-type biogenesis protein CcmC GO:0015232|GO:0015886|GO:0016020|GO:0017004 CDA09_01300 810028923edc9374565bcb4ff21ec07f 254 PRINTS PR01386 Cytochrome c-type biogenesis protein CcmC signature 67 87 1.7E-40 T 01-11-2018 IPR003557 Cytochrome c-type biogenesis protein CcmC GO:0015232|GO:0015886|GO:0016020|GO:0017004 CDA09_01300 810028923edc9374565bcb4ff21ec07f 254 PRINTS PR01386 Cytochrome c-type biogenesis protein CcmC signature 161 187 1.7E-40 T 01-11-2018 IPR003557 Cytochrome c-type biogenesis protein CcmC GO:0015232|GO:0015886|GO:0016020|GO:0017004 CDA09_01300 810028923edc9374565bcb4ff21ec07f 254 PRINTS PR01386 Cytochrome c-type biogenesis protein CcmC signature 126 146 1.7E-40 T 01-11-2018 IPR003557 Cytochrome c-type biogenesis protein CcmC GO:0015232|GO:0015886|GO:0016020|GO:0017004 CDA09_01300 810028923edc9374565bcb4ff21ec07f 254 TIGRFAM TIGR01191 ccmC: heme exporter protein CcmC 50 233 2.8E-65 T 01-11-2018 IPR003557 Cytochrome c-type biogenesis protein CcmC GO:0015232|GO:0015886|GO:0016020|GO:0017004 CDA09_01300 810028923edc9374565bcb4ff21ec07f 254 Pfam PF01578 Cytochrome C assembly protein 31 189 1.2E-25 T 01-11-2018 IPR002541 Cytochrome c assembly protein GO:0017004|GO:0020037 CDA09_11170 7b993d507981272928154bec3def52f5 387 SUPERFAMILY SSF52317 19 209 5.35E-44 T 01-11-2018 IPR029062 Class I glutamine amidotransferase-like CDA09_11170 7b993d507981272928154bec3def52f5 387 Pfam PF12833 Helix-turn-helix domain 250 327 1.9E-24 T 01-11-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 CDA09_11170 7b993d507981272928154bec3def52f5 387 SUPERFAMILY SSF46689 228 278 7.97E-8 T 01-11-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 CDA09_11170 7b993d507981272928154bec3def52f5 387 Gene3D G3DSA:1.10.10.60 224 331 1.0E-34 T 01-11-2018 CDA09_11170 7b993d507981272928154bec3def52f5 387 SMART SM00342 244 327 2.4E-30 T 01-11-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 CDA09_11170 7b993d507981272928154bec3def52f5 387 Pfam PF01965 DJ-1/PfpI family 51 187 1.2E-14 T 01-11-2018 IPR002818 DJ-1/PfpI Reactome: R-HSA-3899300 CDA09_11170 7b993d507981272928154bec3def52f5 387 Gene3D G3DSA:3.40.50.880 16 217 8.6E-54 T 01-11-2018 IPR029062 Class I glutamine amidotransferase-like CDA09_11170 7b993d507981272928154bec3def52f5 387 SUPERFAMILY SSF46689 280 328 1.43E-10 T 01-11-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 CDA09_11080 6ea75f227fa015de054c6a0cb6ad3422 501 Pfam PF00171 Aldehyde dehydrogenase family 30 495 3.1E-168 T 01-11-2018 IPR015590 Aldehyde dehydrogenase domain GO:0016491|GO:0055114 CDA09_11080 6ea75f227fa015de054c6a0cb6ad3422 501 Gene3D G3DSA:3.40.605.10 25 494 3.7E-174 T 01-11-2018 IPR016162 Aldehyde dehydrogenase, N-terminal GO:0016491|GO:0055114 CDA09_11080 6ea75f227fa015de054c6a0cb6ad3422 501 ProSitePatterns PS00687 Aldehyde dehydrogenases glutamic acid active site. 267 274 - T 01-11-2018 IPR029510 Aldehyde dehydrogenase, glutamic acid active site GO:0016491|GO:0055114 CDA09_11080 6ea75f227fa015de054c6a0cb6ad3422 501 SUPERFAMILY SSF53720 21 499 6.15E-162 T 01-11-2018 IPR016161 Aldehyde/histidinol dehydrogenase GO:0016491|GO:0055114 CDA09_11080 6ea75f227fa015de054c6a0cb6ad3422 501 ProSitePatterns PS00070 Aldehyde dehydrogenases cysteine active site. 296 307 - T 01-11-2018 IPR016160 Aldehyde dehydrogenase, cysteine active site GO:0016491|GO:0055114 CDA09_11080 6ea75f227fa015de054c6a0cb6ad3422 501 Gene3D G3DSA:3.40.309.10 272 465 3.7E-174 T 01-11-2018 IPR016163 Aldehyde dehydrogenase, C-terminal GO:0016491|GO:0016620|GO:0055114 CDA09_15105 0bc9e020f85fb8321f9528bafa5d0ea1 667 Pfam PF02534 Type IV secretory system Conjugative DNA transfer 112 558 7.3E-104 T 01-11-2018 IPR003688 Type IV secretion system protein TraG/VirD4 GO:0009291|GO:0016020 CDA09_15105 0bc9e020f85fb8321f9528bafa5d0ea1 667 Gene3D G3DSA:3.40.50.300 325 555 1.6E-48 T 01-11-2018 CDA09_15105 0bc9e020f85fb8321f9528bafa5d0ea1 667 SUPERFAMILY SSF52540 107 554 6.9E-47 T 01-11-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CDA09_14810 3f43dc6a4d8735e788cf971bfd3a6bf9 260 SUPERFAMILY SSF52540 1 231 1.85E-43 T 01-11-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CDA09_14810 3f43dc6a4d8735e788cf971bfd3a6bf9 260 Pfam PF00005 ABC transporter 17 172 6.6E-20 T 01-11-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 CDA09_14810 3f43dc6a4d8735e788cf971bfd3a6bf9 260 ProSitePatterns PS00211 ABC transporters family signature. 146 160 - T 01-11-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 CDA09_14810 3f43dc6a4d8735e788cf971bfd3a6bf9 260 TIGRFAM TIGR01978 sufC: FeS assembly ATPase SufC 2 244 3.3E-108 T 01-11-2018 IPR010230 FeS cluster assembly SUF system, ATPase SufC GO:0005524 CDA09_14810 3f43dc6a4d8735e788cf971bfd3a6bf9 260 SMART SM00382 26 223 3.3E-8 T 01-11-2018 IPR003593 AAA+ ATPase domain CDA09_14810 3f43dc6a4d8735e788cf971bfd3a6bf9 260 Gene3D G3DSA:3.40.50.300 1 248 2.7E-60 T 01-11-2018 CDA09_12475 fc744346ca523e6761a25f7ccbc4023b 348 SUPERFAMILY SSF53448 6 279 7.74E-47 T 01-11-2018 IPR029044 Nucleotide-diphospho-sugar transferases CDA09_12475 fc744346ca523e6761a25f7ccbc4023b 348 Gene3D G3DSA:3.90.550.10 10 252 1.4E-40 T 01-11-2018 IPR029044 Nucleotide-diphospho-sugar transferases CDA09_12475 fc744346ca523e6761a25f7ccbc4023b 348 Pfam PF00535 Glycosyl transferase family 2 23 187 8.4E-30 T 01-11-2018 IPR001173 Glycosyltransferase 2-like Reactome: R-HSA-913709 CDA09_03400 8b40b353d9d4a4f9303abaf9ba0d4476 186 Pfam PF07813 LTXXQ motif family protein 54 147 6.8E-13 T 01-11-2018 IPR012899 LTXXQ motif family protein GO:0042597 CDA09_04635 a7edf4cb69b0d044d3cbc75250922b46 250 Gene3D G3DSA:1.10.760.10 31 215 4.7E-18 T 01-11-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 CDA09_04635 a7edf4cb69b0d044d3cbc75250922b46 250 Pfam PF02167 Cytochrome C1 family 101 249 3.7E-14 T 01-11-2018 IPR002326 Cytochrome c1 GO:0009055|GO:0020037 Reactome: R-HSA-1268020|Reactome: R-HSA-611105 CDA09_04635 a7edf4cb69b0d044d3cbc75250922b46 250 Pfam PF02167 Cytochrome C1 family 40 81 1.2E-5 T 01-11-2018 IPR002326 Cytochrome c1 GO:0009055|GO:0020037 Reactome: R-HSA-1268020|Reactome: R-HSA-611105 CDA09_04635 a7edf4cb69b0d044d3cbc75250922b46 250 SUPERFAMILY SSF46626 29 214 4.41E-49 T 01-11-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 CDA09_04635 a7edf4cb69b0d044d3cbc75250922b46 250 PRINTS PR00603 Cytochrome C1 signature 196 215 8.1E-7 T 01-11-2018 IPR002326 Cytochrome c1 GO:0009055|GO:0020037 Reactome: R-HSA-1268020|Reactome: R-HSA-611105 CDA09_04635 a7edf4cb69b0d044d3cbc75250922b46 250 PRINTS PR00603 Cytochrome C1 signature 215 230 8.1E-7 T 01-11-2018 IPR002326 Cytochrome c1 GO:0009055|GO:0020037 Reactome: R-HSA-1268020|Reactome: R-HSA-611105 CDA09_04635 a7edf4cb69b0d044d3cbc75250922b46 250 PRINTS PR00603 Cytochrome C1 signature 48 67 8.1E-7 T 01-11-2018 IPR002326 Cytochrome c1 GO:0009055|GO:0020037 Reactome: R-HSA-1268020|Reactome: R-HSA-611105 CDA09_10015 1eb18faf9f01874bdc4bca58a6036896 397 Gene3D G3DSA:1.20.1250.20 2 388 2.4E-44 T 01-11-2018 CDA09_10015 1eb18faf9f01874bdc4bca58a6036896 397 Pfam PF07690 Major Facilitator Superfamily 15 215 1.3E-23 T 01-11-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 CDA09_10015 1eb18faf9f01874bdc4bca58a6036896 397 SUPERFAMILY SSF103473 5 388 2.75E-53 T 01-11-2018 IPR036259 MFS transporter superfamily CDA09_02690 3642a7b1854faa9f50526f73e7a38b1f 261 Pfam PF02754 Cysteine-rich domain 140 224 2.1E-12 T 01-11-2018 IPR004017 Cysteine-rich domain CDA09_02690 3642a7b1854faa9f50526f73e7a38b1f 261 Pfam PF02754 Cysteine-rich domain 11 92 4.6E-15 T 01-11-2018 IPR004017 Cysteine-rich domain CDA09_03990 3d96b596e54bad9bb1d08e2a2cf500a0 312 Pfam PF00535 Glycosyl transferase family 2 3 143 1.3E-29 T 01-11-2018 IPR001173 Glycosyltransferase 2-like Reactome: R-HSA-913709 CDA09_03990 3d96b596e54bad9bb1d08e2a2cf500a0 312 Gene3D G3DSA:3.90.550.10 1 212 1.6E-35 T 01-11-2018 IPR029044 Nucleotide-diphospho-sugar transferases CDA09_03990 3d96b596e54bad9bb1d08e2a2cf500a0 312 SUPERFAMILY SSF53448 2 223 9.09E-39 T 01-11-2018 IPR029044 Nucleotide-diphospho-sugar transferases CDA09_10950 c6f8bc9af7566eff53e69ed2e0669b93 366 SUPERFAMILY SSF63380 26 121 9.29E-28 T 01-11-2018 IPR017938 Riboflavin synthase-like beta-barrel CDA09_10950 c6f8bc9af7566eff53e69ed2e0669b93 366 Pfam PF00111 2Fe-2S iron-sulfur cluster binding domain 289 358 6.1E-12 T 01-11-2018 IPR001041 2Fe-2S ferredoxin-type iron-sulfur binding domain GO:0009055|GO:0051536 CDA09_10950 c6f8bc9af7566eff53e69ed2e0669b93 366 Gene3D G3DSA:3.10.20.30 265 366 4.9E-27 T 01-11-2018 IPR012675 Beta-grasp domain superfamily CDA09_10950 c6f8bc9af7566eff53e69ed2e0669b93 366 SUPERFAMILY SSF52343 111 254 1.57E-35 T 01-11-2018 IPR039261 Ferredoxin-NADP reductase (FNR), nucleotide-binding domain CDA09_10950 c6f8bc9af7566eff53e69ed2e0669b93 366 PRINTS PR00410 Phenol hydroxylase reductase family signature 115 124 3.3E-11 T 01-11-2018 IPR001221 Phenol hydroxylase reductase GO:0055114 CDA09_10950 c6f8bc9af7566eff53e69ed2e0669b93 366 PRINTS PR00410 Phenol hydroxylase reductase family signature 131 150 3.3E-11 T 01-11-2018 IPR001221 Phenol hydroxylase reductase GO:0055114 CDA09_10950 c6f8bc9af7566eff53e69ed2e0669b93 366 PRINTS PR00410 Phenol hydroxylase reductase family signature 156 165 3.3E-11 T 01-11-2018 IPR001221 Phenol hydroxylase reductase GO:0055114 CDA09_10950 c6f8bc9af7566eff53e69ed2e0669b93 366 PRINTS PR00410 Phenol hydroxylase reductase family signature 224 232 3.3E-11 T 01-11-2018 IPR001221 Phenol hydroxylase reductase GO:0055114 CDA09_10950 c6f8bc9af7566eff53e69ed2e0669b93 366 PRINTS PR00410 Phenol hydroxylase reductase family signature 52 64 3.3E-11 T 01-11-2018 IPR001221 Phenol hydroxylase reductase GO:0055114 CDA09_10950 c6f8bc9af7566eff53e69ed2e0669b93 366 ProSitePatterns PS00197 2Fe-2S ferredoxin-type iron-sulfur binding region signature. 316 324 - T 01-11-2018 IPR006058 2Fe-2S ferredoxin, iron-sulphur binding site GO:0051537 CDA09_10950 c6f8bc9af7566eff53e69ed2e0669b93 366 Pfam PF00970 Oxidoreductase FAD-binding domain 31 120 1.1E-13 T 01-11-2018 IPR008333 Flavoprotein pyridine nucleotide cytochrome reductase-like, FAD-binding domain Reactome: R-HSA-1237044 CDA09_10950 c6f8bc9af7566eff53e69ed2e0669b93 366 Pfam PF00175 Oxidoreductase NAD-binding domain 132 238 8.0E-13 T 01-11-2018 IPR001433 Oxidoreductase FAD/NAD(P)-binding GO:0016491|GO:0055114 CDA09_10950 c6f8bc9af7566eff53e69ed2e0669b93 366 Gene3D G3DSA:3.40.50.80 125 261 1.0E-29 T 01-11-2018 IPR039261 Ferredoxin-NADP reductase (FNR), nucleotide-binding domain CDA09_10950 c6f8bc9af7566eff53e69ed2e0669b93 366 Gene3D G3DSA:2.40.30.10 23 121 1.1E-26 T 01-11-2018 CDA09_10950 c6f8bc9af7566eff53e69ed2e0669b93 366 SUPERFAMILY SSF54292 247 365 8.78E-30 T 01-11-2018 IPR036010 2Fe-2S ferredoxin-like superfamily GO:0009055|GO:0051536 CDA09_03825 6a2d94e1dce6e51193c0789f641619e8 166 SUPERFAMILY SSF53597 7 165 1.13E-56 T 01-11-2018 IPR024072 Dihydrofolate reductase-like domain superfamily Reactome: R-HSA-196757 CDA09_03825 6a2d94e1dce6e51193c0789f641619e8 166 ProSitePatterns PS00075 Dihydrofolate reductase (DHFR) domain signature. 19 41 - T 01-11-2018 IPR017925 Dihydrofolate reductase conserved site GO:0004146|GO:0055114 KEGG: 00670+1.5.1.3|KEGG: 00790+1.5.1.3|MetaCyc: PWY-3841|MetaCyc: PWY-6614|Reactome: R-HSA-1474151|Reactome: R-HSA-196757|Reactome: R-HSA-539107 CDA09_03825 6a2d94e1dce6e51193c0789f641619e8 166 Gene3D G3DSA:3.40.430.10 7 166 2.5E-58 T 01-11-2018 IPR024072 Dihydrofolate reductase-like domain superfamily Reactome: R-HSA-196757 CDA09_03825 6a2d94e1dce6e51193c0789f641619e8 166 PIRSF PIRSF000194 2 166 4.5E-63 T 01-11-2018 IPR012259 Dihydrofolate reductase GO:0004146|GO:0006545|GO:0046654|GO:0050661|GO:0055114 KEGG: 00670+1.5.1.3|KEGG: 00790+1.5.1.3|MetaCyc: PWY-3841|MetaCyc: PWY-6614 CDA09_03825 6a2d94e1dce6e51193c0789f641619e8 166 Pfam PF00186 Dihydrofolate reductase 8 164 3.7E-59 T 01-11-2018 IPR001796 Dihydrofolate reductase domain GO:0004146|GO:0046654|GO:0055114 KEGG: 00670+1.5.1.3|KEGG: 00790+1.5.1.3|MetaCyc: PWY-3841|MetaCyc: PWY-6614|Reactome: R-HSA-196757 CDA09_03825 6a2d94e1dce6e51193c0789f641619e8 166 PRINTS PR00070 Dihydrofolate reductase signature 46 57 5.1E-17 T 01-11-2018 CDA09_03825 6a2d94e1dce6e51193c0789f641619e8 166 PRINTS PR00070 Dihydrofolate reductase signature 19 29 5.1E-17 T 01-11-2018 CDA09_03825 6a2d94e1dce6e51193c0789f641619e8 166 PRINTS PR00070 Dihydrofolate reductase signature 96 110 5.1E-17 T 01-11-2018 CDA09_03825 6a2d94e1dce6e51193c0789f641619e8 166 PRINTS PR00070 Dihydrofolate reductase signature 33 41 5.1E-17 T 01-11-2018 CDA09_19290 b0a157121de33b56bf3c0380875a32c2 128 Pfam PF01903 CbiX 12 116 6.2E-26 T 01-11-2018 IPR002762 Cobalamin (vitamin B12) biosynthesis CbiX GO:0009236|GO:0016852 KEGG: 00860+4.99.1.3|MetaCyc: PWY-7377 CDA09_19290 b0a157121de33b56bf3c0380875a32c2 128 SUPERFAMILY SSF53800 5 120 1.22E-30 T 01-11-2018 CDA09_19290 b0a157121de33b56bf3c0380875a32c2 128 Gene3D G3DSA:3.40.50.1400 2 121 3.2E-31 T 01-11-2018 CDA09_18805 3b8fcde1f91728b61ee966ab986c46f0 378 SUPERFAMILY SSF109604 171 375 8.47E-32 T 01-11-2018 CDA09_18805 3b8fcde1f91728b61ee966ab986c46f0 378 Pfam PF08668 HDOD domain 185 293 2.4E-11 T 01-11-2018 IPR013976 Metal-dependent hydrolase HDOD CDA09_18805 3b8fcde1f91728b61ee966ab986c46f0 378 Gene3D G3DSA:1.10.3210.10 171 367 4.9E-21 T 01-11-2018 CDA09_00835 588c916d965d0932a9eee919047b7a97 69 Pfam PF11278 Protein of unknown function (DUF3079) 1 51 1.7E-34 T 01-11-2018 IPR021430 Protein of unknown function DUF3079 CDA09_19430 f075c70eccbcd07b8e00cf1bc2b1b786 145 Hamap MF_01341 50S ribosomal protein L15 [rplO]. 3 145 19.001 T 01-11-2018 IPR030878 Ribosomal protein L15 GO:0003735|GO:0006412|GO:0015934 CDA09_19430 f075c70eccbcd07b8e00cf1bc2b1b786 145 SUPERFAMILY SSF52080 4 142 4.19E-42 T 01-11-2018 IPR036227 Ribosomal L18e/L15P superfamily CDA09_19430 f075c70eccbcd07b8e00cf1bc2b1b786 145 Gene3D G3DSA:3.100.10.10 68 144 3.4E-10 T 01-11-2018 CDA09_19430 f075c70eccbcd07b8e00cf1bc2b1b786 145 ProSitePatterns PS00475 Ribosomal protein L15 signature. 109 139 - T 01-11-2018 IPR001196 Ribosomal protein L15, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 CDA09_19430 f075c70eccbcd07b8e00cf1bc2b1b786 145 TIGRFAM TIGR01071 rplO_bact: ribosomal protein uL15 2 142 2.7E-43 T 01-11-2018 IPR005749 Ribosomal protein L15, bacterial-type GO:0003735|GO:0006412|GO:0015934 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 CDA09_19430 f075c70eccbcd07b8e00cf1bc2b1b786 145 Pfam PF00828 Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27A 28 143 8.2E-27 T 01-11-2018 IPR021131 Ribosomal protein L18e/L15P CDA09_18260 e679eda7ea4a3164ca8a12e814742b8b 197 Hamap MF_00067 Phosphoheptose isomerase [gmhA]. 2 192 36.664 T 01-11-2018 IPR004515 Phosphoheptose isomerase GO:0005737|GO:0008968 KEGG: 00540+5.3.1.28|MetaCyc: PWY-6478 CDA09_18260 e679eda7ea4a3164ca8a12e814742b8b 197 SUPERFAMILY SSF53697 3 190 2.4E-59 T 01-11-2018 CDA09_18260 e679eda7ea4a3164ca8a12e814742b8b 197 Gene3D G3DSA:3.40.50.10490 1 195 8.1E-76 T 01-11-2018 CDA09_18260 e679eda7ea4a3164ca8a12e814742b8b 197 Pfam PF13580 SIS domain 10 146 2.8E-39 T 01-11-2018 IPR001347 Sugar isomerase (SIS) GO:0097367|GO:1901135 CDA09_19465 038433cf99233b29a482a2c2f335e828 179 ProSitePatterns PS00358 Ribosomal protein L5 signature. 57 73 - T 01-11-2018 IPR020929 Ribosomal protein L5, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 CDA09_19465 038433cf99233b29a482a2c2f335e828 179 PIRSF PIRSF002161 1 179 9.2E-67 T 01-11-2018 IPR002132 Ribosomal protein L5 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 CDA09_19465 038433cf99233b29a482a2c2f335e828 179 Pfam PF00281 Ribosomal protein L5 24 80 2.8E-28 T 01-11-2018 IPR031310 Ribosomal protein L5, N-terminal Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 CDA09_19465 038433cf99233b29a482a2c2f335e828 179 Pfam PF00673 ribosomal L5P family C-terminus 84 177 1.2E-40 T 01-11-2018 IPR031309 Ribosomal protein L5, C-terminal Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 CDA09_19465 038433cf99233b29a482a2c2f335e828 179 Gene3D G3DSA:3.30.1440.10 1 179 5.3E-80 T 01-11-2018 IPR022803 Ribosomal protein L5 domain superfamily Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 CDA09_19465 038433cf99233b29a482a2c2f335e828 179 Hamap MF_01333_B 50S ribosomal protein L5 [rplE]. 1 179 44.193 T 01-11-2018 IPR020930 Ribosomal protein L5, bacterial-type GO:0003735|GO:0005622|GO:0005840|GO:0006412 CDA09_19465 038433cf99233b29a482a2c2f335e828 179 SUPERFAMILY SSF55282 3 179 1.27E-78 T 01-11-2018 IPR022803 Ribosomal protein L5 domain superfamily Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 CDA09_06740 e0d029e64c6fb6244ad8e122ac6379d6 224 Pfam PF02107 Flagellar L-ring protein 45 223 7.4E-61 T 01-11-2018 IPR000527 Flagellar L-ring protein GO:0003774|GO:0009427|GO:0071973 CDA09_06740 e0d029e64c6fb6244ad8e122ac6379d6 224 PRINTS PR01008 Flagellar L-ring protein signature 201 215 6.1E-26 T 01-11-2018 IPR000527 Flagellar L-ring protein GO:0003774|GO:0009427|GO:0071973 CDA09_06740 e0d029e64c6fb6244ad8e122ac6379d6 224 PRINTS PR01008 Flagellar L-ring protein signature 138 153 6.1E-26 T 01-11-2018 IPR000527 Flagellar L-ring protein GO:0003774|GO:0009427|GO:0071973 CDA09_06740 e0d029e64c6fb6244ad8e122ac6379d6 224 PRINTS PR01008 Flagellar L-ring protein signature 164 180 6.1E-26 T 01-11-2018 IPR000527 Flagellar L-ring protein GO:0003774|GO:0009427|GO:0071973 CDA09_06740 e0d029e64c6fb6244ad8e122ac6379d6 224 PRINTS PR01008 Flagellar L-ring protein signature 185 199 6.1E-26 T 01-11-2018 IPR000527 Flagellar L-ring protein GO:0003774|GO:0009427|GO:0071973 CDA09_06740 e0d029e64c6fb6244ad8e122ac6379d6 224 PRINTS PR01008 Flagellar L-ring protein signature 67 79 6.1E-26 T 01-11-2018 IPR000527 Flagellar L-ring protein GO:0003774|GO:0009427|GO:0071973 CDA09_06740 e0d029e64c6fb6244ad8e122ac6379d6 224 Hamap MF_00415 Flagellar L-ring protein [flgH]. 1 222 25.809 T 01-11-2018 IPR000527 Flagellar L-ring protein GO:0003774|GO:0009427|GO:0071973 CDA09_03450 cd22ae6128386c805c1c00bb2d3dd1ee 149 Hamap MF_00116 Deoxyuridine 5'-triphosphate nucleotidohydrolase [dut]. 6 148 33.146 T 01-11-2018 IPR008181 Deoxyuridine triphosphate nucleotidohydrolase GO:0004170|GO:0046080 KEGG: 00240+3.6.1.23|KEGG: 00983+3.6.1.23 CDA09_03450 cd22ae6128386c805c1c00bb2d3dd1ee 149 SUPERFAMILY SSF51283 4 148 3.53E-51 T 01-11-2018 IPR036157 dUTPase-like superfamily CDA09_03450 cd22ae6128386c805c1c00bb2d3dd1ee 149 Gene3D G3DSA:2.70.40.10 1 149 1.3E-50 T 01-11-2018 IPR036157 dUTPase-like superfamily CDA09_03450 cd22ae6128386c805c1c00bb2d3dd1ee 149 Pfam PF00692 dUTPase 16 147 5.1E-39 T 01-11-2018 IPR029054 dUTPase-like CDA09_03450 cd22ae6128386c805c1c00bb2d3dd1ee 149 TIGRFAM TIGR00576 dut: dUTP diphosphatase 15 148 8.0E-48 T 01-11-2018 IPR008181 Deoxyuridine triphosphate nucleotidohydrolase GO:0004170|GO:0046080 KEGG: 00240+3.6.1.23|KEGG: 00983+3.6.1.23 CDA09_12670 920ac2d0bf8b1c49b60163a97b11d2da 397 Pfam PF12704 MacB-like periplasmic core domain 19 251 4.0E-11 T 01-11-2018 IPR025857 MacB-like periplasmic core domain CDA09_07140 633cf4fae268c87f18094585332fca72 271 SUPERFAMILY SSF53335 11 266 3.93E-43 T 01-11-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase CDA09_07140 633cf4fae268c87f18094585332fca72 271 Hamap MF_00835 Malonyl-[acyl-carrier protein] O-methyltransferase [bioC]. 6 265 27.184 T 01-11-2018 IPR011814 Malonyl-[acyl-carrier protein] O-methyltransferase BioC GO:0009102|GO:0010340 KEGG: 00780+2.1.1.197|MetaCyc: PWY-6519 CDA09_07140 633cf4fae268c87f18094585332fca72 271 TIGRFAM TIGR02072 BioC: malonyl-acyl carrier protein O-methyltransferase BioC 14 264 2.4E-56 T 01-11-2018 IPR011814 Malonyl-[acyl-carrier protein] O-methyltransferase BioC GO:0009102|GO:0010340 KEGG: 00780+2.1.1.197|MetaCyc: PWY-6519 CDA09_07140 633cf4fae268c87f18094585332fca72 271 Gene3D G3DSA:3.40.50.150 1 266 2.1E-37 T 01-11-2018 CDA09_07140 633cf4fae268c87f18094585332fca72 271 Pfam PF08241 Methyltransferase domain 53 146 1.2E-20 T 01-11-2018 IPR013216 Methyltransferase type 11 GO:0008168 CDA09_01440 d29fc2e01a77db37b8b2770c144c678b 231 TIGRFAM TIGR04257 nanowire_3heme: c(7)-type cytochrome triheme domain 113 174 2.7E-17 T 01-11-2018 IPR026352 C(7)-type cytochrome triheme domain CDA09_01440 d29fc2e01a77db37b8b2770c144c678b 231 Pfam PF14522 Cytochrome c7 and related cytochrome c 114 174 3.5E-6 T 01-11-2018 IPR029467 C-type polyheme cytochrome OmcB CDA09_01440 d29fc2e01a77db37b8b2770c144c678b 231 Gene3D G3DSA:3.90.10.10 103 175 3.6E-16 T 01-11-2018 CDA09_01440 d29fc2e01a77db37b8b2770c144c678b 231 SUPERFAMILY SSF48695 109 173 2.26E-15 T 01-11-2018 IPR036280 Multiheme cytochrome superfamily CDA09_21525 74a93fbf1b5f64b86d1aedf8f1c6dc76 369 SUPERFAMILY SSF51395 10 367 7.82E-121 T 01-11-2018 CDA09_21525 74a93fbf1b5f64b86d1aedf8f1c6dc76 369 Gene3D G3DSA:3.20.20.70 12 369 5.3E-134 T 01-11-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 CDA09_21525 74a93fbf1b5f64b86d1aedf8f1c6dc76 369 Pfam PF00724 NADH:flavin oxidoreductase / NADH oxidase family 14 346 1.3E-89 T 01-11-2018 IPR001155 NADH:flavin oxidoreductase/NADH oxidase, N-terminal GO:0010181|GO:0016491|GO:0055114 CDA09_01205 535a2ece5db74586722ddd5756944d8c 71 Pfam PF01192 RNA polymerase Rpb6 8 61 3.3E-16 T 01-11-2018 IPR006110 RNA polymerase, subunit omega/K/RPB6 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6|Reactome: R-HSA-112382|Reactome: R-HSA-113418|Reactome: R-HSA-167152|Reactome: R-HSA-167158|Reactome: R-HSA-167160|Reactome: R-HSA-167161|Reactome: R-HSA-167162|Reactome: R-HSA-167172|Reactome: R-HSA-167200|Reactome: R-HSA-167238|Reactome: R-HSA-167242|Reactome: R-HSA-167243|Reactome: R-HSA-167246|Reactome: R-HSA-167287|Reactome: R-HSA-167290|Reactome: R-HSA-168325|Reactome: R-HSA-1834949|Reactome: R-HSA-203927|Reactome: R-HSA-427413|Reactome: R-HSA-452723|Reactome: R-HSA-5250924|Reactome: R-HSA-5578749|Reactome: R-HSA-5601884|Reactome: R-HSA-5617472|Reactome: R-HSA-674695|Reactome: R-HSA-6781823|Reactome: R-HSA-6781827|Reactome: R-HSA-6782135|Reactome: R-HSA-6782210|Reactome: R-HSA-6796648|Reactome: R-HSA-6803529|Reactome: R-HSA-6807505|Reactome: R-HSA-72086|Reactome: R-HSA-72163|Reactome: R-HSA-72165|Reactome: R-HSA-72203|Reactome: R-HSA-73762|Reactome: R-HSA-73772|Reactome: R-HSA-73776|Reactome: R-HSA-73777|Reactome: R-HSA-73779|Reactome: R-HSA-73780|Reactome: R-HSA-73863|Reactome: R-HSA-73980|Reactome: R-HSA-749476|Reactome: R-HSA-75953|Reactome: R-HSA-75955|Reactome: R-HSA-76042|Reactome: R-HSA-76061|Reactome: R-HSA-76066|Reactome: R-HSA-76071|Reactome: R-HSA-77075|Reactome: R-HSA-8851708|Reactome: R-HSA-9018519 CDA09_01205 535a2ece5db74586722ddd5756944d8c 71 Hamap MF_00366 DNA-directed RNA polymerase subunit omega [rpoZ]. 1 64 17.213 T 01-11-2018 IPR003716 DNA-directed RNA polymerase, omega subunit GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 CDA09_01205 535a2ece5db74586722ddd5756944d8c 71 SUPERFAMILY SSF63562 1 68 2.88E-22 T 01-11-2018 IPR036161 RPB6/omega subunit-like superfamily GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6|Reactome: R-HSA-112382|Reactome: R-HSA-113418|Reactome: R-HSA-167152|Reactome: R-HSA-167158|Reactome: R-HSA-167160|Reactome: R-HSA-167161|Reactome: R-HSA-167162|Reactome: R-HSA-167172|Reactome: R-HSA-167200|Reactome: R-HSA-167238|Reactome: R-HSA-167242|Reactome: R-HSA-167243|Reactome: R-HSA-167246|Reactome: R-HSA-167287|Reactome: R-HSA-167290|Reactome: R-HSA-168325|Reactome: R-HSA-1834949|Reactome: R-HSA-203927|Reactome: R-HSA-427413|Reactome: R-HSA-452723|Reactome: R-HSA-5250924|Reactome: R-HSA-5578749|Reactome: R-HSA-5601884|Reactome: R-HSA-5617472|Reactome: R-HSA-674695|Reactome: R-HSA-6781823|Reactome: R-HSA-6781827|Reactome: R-HSA-6782135|Reactome: R-HSA-6782210|Reactome: R-HSA-6796648|Reactome: R-HSA-6803529|Reactome: R-HSA-6807505|Reactome: R-HSA-72086|Reactome: R-HSA-72163|Reactome: R-HSA-72165|Reactome: R-HSA-72203|Reactome: R-HSA-73762|Reactome: R-HSA-73772|Reactome: R-HSA-73776|Reactome: R-HSA-73777|Reactome: R-HSA-73779|Reactome: R-HSA-73780|Reactome: R-HSA-73863|Reactome: R-HSA-73980|Reactome: R-HSA-749476|Reactome: R-HSA-75953|Reactome: R-HSA-75955|Reactome: R-HSA-76042|Reactome: R-HSA-76061|Reactome: R-HSA-76066|Reactome: R-HSA-76071|Reactome: R-HSA-77075|Reactome: R-HSA-8851708|Reactome: R-HSA-9018519 CDA09_01205 535a2ece5db74586722ddd5756944d8c 71 Gene3D G3DSA:3.90.940.10 1 71 2.9E-23 T 01-11-2018 IPR012293 RNA polymerase subunit, RPB6/omega GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6|Reactome: R-HSA-112382|Reactome: R-HSA-113418|Reactome: R-HSA-167152|Reactome: R-HSA-167158|Reactome: R-HSA-167160|Reactome: R-HSA-167161|Reactome: R-HSA-167162|Reactome: R-HSA-167172|Reactome: R-HSA-167200|Reactome: R-HSA-167238|Reactome: R-HSA-167242|Reactome: R-HSA-167243|Reactome: R-HSA-167246|Reactome: R-HSA-167287|Reactome: R-HSA-167290|Reactome: R-HSA-168325|Reactome: R-HSA-1834949|Reactome: R-HSA-203927|Reactome: R-HSA-427413|Reactome: R-HSA-452723|Reactome: R-HSA-5250924|Reactome: R-HSA-5578749|Reactome: R-HSA-5601884|Reactome: R-HSA-5617472|Reactome: R-HSA-674695|Reactome: R-HSA-6781823|Reactome: R-HSA-6781827|Reactome: R-HSA-6782135|Reactome: R-HSA-6782210|Reactome: R-HSA-6796648|Reactome: R-HSA-6803529|Reactome: R-HSA-6807505|Reactome: R-HSA-72086|Reactome: R-HSA-72163|Reactome: R-HSA-72165|Reactome: R-HSA-72203|Reactome: R-HSA-73762|Reactome: R-HSA-73772|Reactome: R-HSA-73776|Reactome: R-HSA-73777|Reactome: R-HSA-73779|Reactome: R-HSA-73780|Reactome: R-HSA-73863|Reactome: R-HSA-73980|Reactome: R-HSA-749476|Reactome: R-HSA-75953|Reactome: R-HSA-75955|Reactome: R-HSA-76042|Reactome: R-HSA-76061|Reactome: R-HSA-76066|Reactome: R-HSA-76071|Reactome: R-HSA-77075|Reactome: R-HSA-8851708|Reactome: R-HSA-9018519 CDA09_01205 535a2ece5db74586722ddd5756944d8c 71 SMART SM01409 8 63 3.9E-16 T 01-11-2018 IPR006110 RNA polymerase, subunit omega/K/RPB6 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6|Reactome: R-HSA-112382|Reactome: R-HSA-113418|Reactome: R-HSA-167152|Reactome: R-HSA-167158|Reactome: R-HSA-167160|Reactome: R-HSA-167161|Reactome: R-HSA-167162|Reactome: R-HSA-167172|Reactome: R-HSA-167200|Reactome: R-HSA-167238|Reactome: R-HSA-167242|Reactome: R-HSA-167243|Reactome: R-HSA-167246|Reactome: R-HSA-167287|Reactome: R-HSA-167290|Reactome: R-HSA-168325|Reactome: R-HSA-1834949|Reactome: R-HSA-203927|Reactome: R-HSA-427413|Reactome: R-HSA-452723|Reactome: R-HSA-5250924|Reactome: R-HSA-5578749|Reactome: R-HSA-5601884|Reactome: R-HSA-5617472|Reactome: R-HSA-674695|Reactome: R-HSA-6781823|Reactome: R-HSA-6781827|Reactome: R-HSA-6782135|Reactome: R-HSA-6782210|Reactome: R-HSA-6796648|Reactome: R-HSA-6803529|Reactome: R-HSA-6807505|Reactome: R-HSA-72086|Reactome: R-HSA-72163|Reactome: R-HSA-72165|Reactome: R-HSA-72203|Reactome: R-HSA-73762|Reactome: R-HSA-73772|Reactome: R-HSA-73776|Reactome: R-HSA-73777|Reactome: R-HSA-73779|Reactome: R-HSA-73780|Reactome: R-HSA-73863|Reactome: R-HSA-73980|Reactome: R-HSA-749476|Reactome: R-HSA-75953|Reactome: R-HSA-75955|Reactome: R-HSA-76042|Reactome: R-HSA-76061|Reactome: R-HSA-76066|Reactome: R-HSA-76071|Reactome: R-HSA-77075|Reactome: R-HSA-8851708|Reactome: R-HSA-9018519 CDA09_01205 535a2ece5db74586722ddd5756944d8c 71 TIGRFAM TIGR00690 rpoZ: DNA-directed RNA polymerase, omega subunit 1 61 2.5E-23 T 01-11-2018 IPR003716 DNA-directed RNA polymerase, omega subunit GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 CDA09_05655 1d0785d10fb93102e8ba32c70a93e9af 535 Gene3D G3DSA:3.90.226.10 1 271 1.8E-95 T 01-11-2018 CDA09_05655 1d0785d10fb93102e8ba32c70a93e9af 535 Pfam PF01039 Carboxyl transferase domain 48 529 3.1E-147 T 01-11-2018 IPR034733 Acetyl-CoA carboxylase MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6722|Reactome: R-HSA-196780 CDA09_05655 1d0785d10fb93102e8ba32c70a93e9af 535 SUPERFAMILY SSF52096 23 269 7.85E-70 T 01-11-2018 IPR029045 ClpP/crotonase-like domain superfamily CDA09_05655 1d0785d10fb93102e8ba32c70a93e9af 535 SUPERFAMILY SSF52096 237 517 5.29E-86 T 01-11-2018 IPR029045 ClpP/crotonase-like domain superfamily CDA09_05655 1d0785d10fb93102e8ba32c70a93e9af 535 Gene3D G3DSA:3.90.226.10 274 535 2.1E-101 T 01-11-2018 CDA09_15700 1ec8a82bae07e8c0a4ad81e997af410e 202 Pfam PF13977 BetI-type transcriptional repressor, C-terminal 102 198 6.1E-9 T 01-11-2018 IPR039538 BetI-type transcriptional repressor, C-terminal CDA09_15700 1ec8a82bae07e8c0a4ad81e997af410e 202 Gene3D G3DSA:1.10.357.10 7 200 2.7E-33 T 01-11-2018 CDA09_15700 1ec8a82bae07e8c0a4ad81e997af410e 202 SUPERFAMILY SSF46689 9 80 2.67E-18 T 01-11-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 CDA09_15700 1ec8a82bae07e8c0a4ad81e997af410e 202 SUPERFAMILY SSF48498 88 195 6.16E-8 T 01-11-2018 IPR036271 Tetracyclin repressor-like, C-terminal domain superfamily CDA09_15700 1ec8a82bae07e8c0a4ad81e997af410e 202 Pfam PF00440 Bacterial regulatory proteins, tetR family 18 64 3.1E-14 T 01-11-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 CDA09_15700 1ec8a82bae07e8c0a4ad81e997af410e 202 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 18 31 1.0E-8 T 01-11-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 CDA09_15700 1ec8a82bae07e8c0a4ad81e997af410e 202 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 39 62 1.0E-8 T 01-11-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 CDA09_03695 fdc4f3ed5093bba9e81d64e07141fc8e 197 TIGRFAM TIGR00023 TIGR00023: acyl-phosphate glycerol 3-phosphate acyltransferase 3 192 8.1E-59 T 01-11-2018 IPR003811 Glycerol-3-phosphate acyltransferase, PlsY GO:0005886|GO:0008654|GO:0043772 CDA09_03695 fdc4f3ed5093bba9e81d64e07141fc8e 197 Pfam PF02660 Glycerol-3-phosphate acyltransferase 10 184 6.5E-50 T 01-11-2018 IPR003811 Glycerol-3-phosphate acyltransferase, PlsY GO:0005886|GO:0008654|GO:0043772 CDA09_03695 fdc4f3ed5093bba9e81d64e07141fc8e 197 Hamap MF_01043 Glycerol-3-phosphate acyltransferase [plsY]. 5 193 19.877 T 01-11-2018 IPR003811 Glycerol-3-phosphate acyltransferase, PlsY GO:0005886|GO:0008654|GO:0043772 CDA09_03695 fdc4f3ed5093bba9e81d64e07141fc8e 197 SMART SM01207 8 185 4.0E-81 T 01-11-2018 IPR003811 Glycerol-3-phosphate acyltransferase, PlsY GO:0005886|GO:0008654|GO:0043772 CDA09_21215 e2297a2c5bc9af531f1d70b454996540 397 TIGRFAM TIGR00710 efflux_Bcr_CflA: drug resistance transporter, Bcr/CflA subfamily 8 360 1.4E-70 T 01-11-2018 IPR004812 Drug resistance transporter Bcr/CmlA subfamily GO:0006855|GO:0015238|GO:0016021 CDA09_21215 e2297a2c5bc9af531f1d70b454996540 397 Pfam PF07690 Major Facilitator Superfamily 14 346 3.4E-46 T 01-11-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 CDA09_21215 e2297a2c5bc9af531f1d70b454996540 397 Gene3D G3DSA:1.20.1720.10 8 388 1.5E-99 T 01-11-2018 CDA09_21215 e2297a2c5bc9af531f1d70b454996540 397 SUPERFAMILY SSF103473 6 391 5.89E-61 T 01-11-2018 IPR036259 MFS transporter superfamily CDA09_09085 f312c3b725ff623e912d0a6d4b8007ca 539 Pfam PF06980 Protein of unknown function (DUF1302) 34 539 9.7E-117 T 01-11-2018 IPR010727 Protein of unknown function DUF1302 CDA09_09085 f312c3b725ff623e912d0a6d4b8007ca 539 SUPERFAMILY SSF56935 146 385 2.01E-5 T 01-11-2018 CDA09_14805 ca925487242cc0b821ab08c5794be4f0 439 TIGRFAM TIGR01981 sufD: FeS assembly protein SufD 155 426 7.8E-81 T 01-11-2018 IPR011542 SUF system FeS cluster assembly, SufD GO:0016226 CDA09_14805 ca925487242cc0b821ab08c5794be4f0 439 Pfam PF01458 Uncharacterized protein family (UPF0051) 186 410 4.5E-76 T 01-11-2018 IPR000825 SUF system FeS cluster assembly, SufBD GO:0016226 CDA09_14805 ca925487242cc0b821ab08c5794be4f0 439 SUPERFAMILY SSF101960 30 434 3.53E-101 T 01-11-2018 IPR037284 SUF system FeS cluster assembly, SufBD superfamily CDA09_17275 ef4ff876e03633519c7c0e83bf0a8a42 256 SUPERFAMILY SSF88713 4 253 1.19E-97 T 01-11-2018 IPR011330 Glycoside hydrolase/deacetylase, beta/alpha-barrel GO:0003824|GO:0005975 CDA09_17275 ef4ff876e03633519c7c0e83bf0a8a42 256 Gene3D G3DSA:3.20.20.370 3 256 8.1E-101 T 01-11-2018 CDA09_17275 ef4ff876e03633519c7c0e83bf0a8a42 256 Pfam PF03746 LamB/YcsF family 5 242 7.7E-100 T 01-11-2018 IPR005501 UPF0271 family, LamB/YcsF/PxpA KEGG: 00480+3.5.2.9|MetaCyc: PWY-4041|MetaCyc: PWY-7942 CDA09_17275 ef4ff876e03633519c7c0e83bf0a8a42 256 Hamap MF_00691 UPF0271 protein YbgL [ybgL]. 3 247 44.597 T 01-11-2018 IPR005501 UPF0271 family, LamB/YcsF/PxpA KEGG: 00480+3.5.2.9|MetaCyc: PWY-4041|MetaCyc: PWY-7942 CDA09_09175 812586c929ea0c53ebec9e930a5bd320 350 Pfam PF00753 Metallo-beta-lactamase superfamily 51 260 4.5E-16 T 01-11-2018 IPR001279 Metallo-beta-lactamase CDA09_09175 812586c929ea0c53ebec9e930a5bd320 350 SUPERFAMILY SSF56281 4 333 6.03E-57 T 01-11-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like CDA09_09175 812586c929ea0c53ebec9e930a5bd320 350 Gene3D G3DSA:3.60.15.10 16 286 3.1E-52 T 01-11-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like CDA09_09175 812586c929ea0c53ebec9e930a5bd320 350 SMART SM00849 35 260 4.0E-21 T 01-11-2018 IPR001279 Metallo-beta-lactamase CDA09_07305 2630a3c721e7ae33250ae0602dd683f7 147 Pfam PF01814 Hemerythrin HHE cation binding domain 5 126 3.1E-25 T 01-11-2018 IPR012312 Haemerythrin-like Reactome: R-HSA-390471|Reactome: R-HSA-8951664|Reactome: R-HSA-917937|Reactome: R-HSA-983168 CDA09_07305 2630a3c721e7ae33250ae0602dd683f7 147 Gene3D G3DSA:1.20.120.520 3 141 2.3E-27 T 01-11-2018 CDA09_10595 76d41b0cd6bccc324fc5ecfc2af10317 130 Gene3D G3DSA:3.40.50.620 1 128 1.7E-23 T 01-11-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold CDA09_10595 76d41b0cd6bccc324fc5ecfc2af10317 130 PRINTS PR01438 Universal stress protein signature 88 100 1.5E-5 T 01-11-2018 IPR006015 Universal stress protein A CDA09_10595 76d41b0cd6bccc324fc5ecfc2af10317 130 PRINTS PR01438 Universal stress protein signature 106 128 1.5E-5 T 01-11-2018 IPR006015 Universal stress protein A CDA09_10595 76d41b0cd6bccc324fc5ecfc2af10317 130 SUPERFAMILY SSF52402 3 128 2.76E-20 T 01-11-2018 CDA09_10595 76d41b0cd6bccc324fc5ecfc2af10317 130 Pfam PF00582 Universal stress protein family 3 128 5.5E-17 T 01-11-2018 IPR006016 UspA CDA09_15785 e5cb9c5b50d1b2a6e3ce2a31b2a8801f 415 Gene3D G3DSA:1.10.3210.10 27 328 3.4E-50 T 01-11-2018 CDA09_15785 e5cb9c5b50d1b2a6e3ce2a31b2a8801f 415 Pfam PF11871 Domain of unknown function (DUF3391) 3 127 2.7E-23 T 01-11-2018 IPR021812 Protein of unknown function DUF3391 CDA09_15785 e5cb9c5b50d1b2a6e3ce2a31b2a8801f 415 Pfam PF13487 HD domain 221 278 3.3E-15 T 01-11-2018 CDA09_15785 e5cb9c5b50d1b2a6e3ce2a31b2a8801f 415 SMART SM00471 162 297 1.7E-4 T 01-11-2018 IPR003607 HD/PDEase domain CDA09_15785 e5cb9c5b50d1b2a6e3ce2a31b2a8801f 415 SUPERFAMILY SSF109604 161 327 1.23E-24 T 01-11-2018 CDA09_19530 862d3e8e47d4f5f26f7adfa6ec7010d4 103 Gene3D G3DSA:3.30.70.600 1 103 6.2E-37 T 01-11-2018 IPR036838 Ribosomal protein S10 domain superfamily CDA09_19530 862d3e8e47d4f5f26f7adfa6ec7010d4 103 SUPERFAMILY SSF54999 5 102 7.72E-38 T 01-11-2018 IPR036838 Ribosomal protein S10 domain superfamily CDA09_19530 862d3e8e47d4f5f26f7adfa6ec7010d4 103 PRINTS PR00971 Ribosomal protein S10 family signature 5 18 1.1E-17 T 01-11-2018 IPR001848 Ribosomal protein S10 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 CDA09_19530 862d3e8e47d4f5f26f7adfa6ec7010d4 103 PRINTS PR00971 Ribosomal protein S10 family signature 40 55 1.1E-17 T 01-11-2018 IPR001848 Ribosomal protein S10 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 CDA09_19530 862d3e8e47d4f5f26f7adfa6ec7010d4 103 PRINTS PR00971 Ribosomal protein S10 family signature 61 75 1.1E-17 T 01-11-2018 IPR001848 Ribosomal protein S10 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 CDA09_19530 862d3e8e47d4f5f26f7adfa6ec7010d4 103 TIGRFAM TIGR01049 rpsJ_bact: ribosomal protein uS10 4 101 1.9E-45 T 01-11-2018 IPR001848 Ribosomal protein S10 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 CDA09_19530 862d3e8e47d4f5f26f7adfa6ec7010d4 103 Hamap MF_00508 30S ribosomal protein S10 [rpsJ]. 3 102 27.511 T 01-11-2018 IPR001848 Ribosomal protein S10 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 CDA09_19530 862d3e8e47d4f5f26f7adfa6ec7010d4 103 SMART SM01403 7 101 3.0E-56 T 01-11-2018 IPR027486 Ribosomal protein S10 domain CDA09_19530 862d3e8e47d4f5f26f7adfa6ec7010d4 103 ProSitePatterns PS00361 Ribosomal protein S10 signature. 29 44 - T 01-11-2018 IPR018268 Ribosomal protein S10, conserved site GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 CDA09_19530 862d3e8e47d4f5f26f7adfa6ec7010d4 103 Pfam PF00338 Ribosomal protein S10p/S20e 7 101 2.2E-35 T 01-11-2018 IPR027486 Ribosomal protein S10 domain CDA09_08280 daa092f317c7a3b887affeb84d6f3a8c 374 SUPERFAMILY SSF53187 75 348 4.3E-47 T 01-11-2018 CDA09_08280 daa092f317c7a3b887affeb84d6f3a8c 374 Pfam PF00246 Zinc carboxypeptidase 77 273 2.0E-14 T 01-11-2018 IPR000834 Peptidase M14, carboxypeptidase A GO:0004181|GO:0006508|GO:0008270 CDA09_08280 daa092f317c7a3b887affeb84d6f3a8c 374 ProSitePatterns PS00132 Zinc carboxypeptidases, zinc-binding region 1 signature. 90 112 - T 01-11-2018 IPR000834 Peptidase M14, carboxypeptidase A GO:0004181|GO:0006508|GO:0008270 CDA09_08280 daa092f317c7a3b887affeb84d6f3a8c 374 Gene3D G3DSA:3.40.630.10 59 313 8.7E-29 T 01-11-2018 CDA09_05935 14e677f45238a2a98f8fd05b5cbb6b5a 458 Pfam PF02601 Exonuclease VII, large subunit 138 450 7.3E-88 T 01-11-2018 IPR020579 Exonuclease VII, large subunit, C-terminal GO:0008855 CDA09_05935 14e677f45238a2a98f8fd05b5cbb6b5a 458 TIGRFAM TIGR00237 xseA: exodeoxyribonuclease VII, large subunit 23 453 2.3E-133 T 01-11-2018 IPR003753 Exonuclease VII, large subunit GO:0006308|GO:0008855|GO:0009318 CDA09_05935 14e677f45238a2a98f8fd05b5cbb6b5a 458 Hamap MF_00378 Exodeoxyribonuclease 7 large subunit [xseA]. 19 454 27.251 T 01-11-2018 IPR003753 Exonuclease VII, large subunit GO:0006308|GO:0008855|GO:0009318 CDA09_05935 14e677f45238a2a98f8fd05b5cbb6b5a 458 Pfam PF13742 OB-fold nucleic acid binding domain 23 114 4.0E-29 T 01-11-2018 IPR025824 OB-fold nucleic acid binding domain GO:0003676 CDA09_03090 4697c83742e28d3580da0c121f35894a 192 Gene3D G3DSA:2.40.128.110 26 192 2.8E-47 T 01-11-2018 IPR036761 Lipid/polyisoprenoid-binding, YceI-like superfamily CDA09_03090 4697c83742e28d3580da0c121f35894a 192 SMART SM00867 27 190 1.2E-59 T 01-11-2018 IPR007372 Lipid/polyisoprenoid-binding, YceI-like CDA09_03090 4697c83742e28d3580da0c121f35894a 192 SUPERFAMILY SSF101874 24 191 1.96E-51 T 01-11-2018 IPR036761 Lipid/polyisoprenoid-binding, YceI-like superfamily CDA09_03090 4697c83742e28d3580da0c121f35894a 192 Pfam PF04264 YceI-like domain 28 189 4.3E-38 T 01-11-2018 IPR007372 Lipid/polyisoprenoid-binding, YceI-like CDA09_13560 b88d0133b7b77530221565257e6a2f6a 276 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 163 182 1.4E-5 T 01-11-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CDA09_13560 b88d0133b7b77530221565257e6a2f6a 276 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 84 95 1.4E-5 T 01-11-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CDA09_13560 b88d0133b7b77530221565257e6a2f6a 276 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 15 255 4.9E-57 T 01-11-2018 CDA09_13560 b88d0133b7b77530221565257e6a2f6a 276 SUPERFAMILY SSF51735 7 256 4.41E-70 T 01-11-2018 IPR036291 NAD(P)-binding domain superfamily CDA09_13560 b88d0133b7b77530221565257e6a2f6a 276 Gene3D G3DSA:3.40.50.720 1 271 1.2E-72 T 01-11-2018 CDA09_13560 b88d0133b7b77530221565257e6a2f6a 276 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 150 178 - T 01-11-2018 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 CDA09_13560 b88d0133b7b77530221565257e6a2f6a 276 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 84 95 2.5E-27 T 01-11-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CDA09_13560 b88d0133b7b77530221565257e6a2f6a 276 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 137 153 2.5E-27 T 01-11-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CDA09_13560 b88d0133b7b77530221565257e6a2f6a 276 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 218 238 2.5E-27 T 01-11-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CDA09_13560 b88d0133b7b77530221565257e6a2f6a 276 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 10 27 2.5E-27 T 01-11-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CDA09_13560 b88d0133b7b77530221565257e6a2f6a 276 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 184 201 2.5E-27 T 01-11-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CDA09_13560 b88d0133b7b77530221565257e6a2f6a 276 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 163 182 2.5E-27 T 01-11-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CDA09_05195 555117468c0d2b738a335942db21e06e 575 Gene3D G3DSA:3.30.450.20 253 384 5.5E-14 T 01-11-2018 CDA09_05195 555117468c0d2b738a335942db21e06e 575 SUPERFAMILY SSF55785 127 235 4.54E-16 T 01-11-2018 IPR035965 PAS domain superfamily CDA09_05195 555117468c0d2b738a335942db21e06e 575 Gene3D G3DSA:3.30.450.20 110 225 1.6E-18 T 01-11-2018 CDA09_05195 555117468c0d2b738a335942db21e06e 575 SUPERFAMILY SSF55785 251 377 6.98E-13 T 01-11-2018 IPR035965 PAS domain superfamily CDA09_05195 555117468c0d2b738a335942db21e06e 575 SUPERFAMILY SSF55073 395 550 1.96E-48 T 01-11-2018 IPR029787 Nucleotide cyclase CDA09_05195 555117468c0d2b738a335942db21e06e 575 Pfam PF00990 Diguanylate cyclase, GGDEF domain 390 547 2.1E-45 T 01-11-2018 IPR000160 GGDEF domain CDA09_05195 555117468c0d2b738a335942db21e06e 575 Pfam PF08447 PAS fold 136 210 1.5E-9 T 01-11-2018 IPR013655 PAS fold-3 GO:0005515 CDA09_05195 555117468c0d2b738a335942db21e06e 575 SMART SM00091 261 326 0.001 T 01-11-2018 IPR000014 PAS domain CDA09_05195 555117468c0d2b738a335942db21e06e 575 SMART SM00091 112 180 1.5E-4 T 01-11-2018 IPR000014 PAS domain CDA09_05195 555117468c0d2b738a335942db21e06e 575 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 259 386 2.0E-8 T 01-11-2018 IPR000014 PAS domain CDA09_05195 555117468c0d2b738a335942db21e06e 575 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 113 235 1.3E-10 T 01-11-2018 IPR000014 PAS domain CDA09_05195 555117468c0d2b738a335942db21e06e 575 SMART SM00267 380 551 2.3E-60 T 01-11-2018 IPR000160 GGDEF domain CDA09_05195 555117468c0d2b738a335942db21e06e 575 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 388 550 6.1E-47 T 01-11-2018 IPR000160 GGDEF domain CDA09_05195 555117468c0d2b738a335942db21e06e 575 SMART SM00086 186 228 0.005 T 01-11-2018 IPR001610 PAC motif CDA09_05195 555117468c0d2b738a335942db21e06e 575 Pfam PF08448 PAS fold 269 381 1.0E-7 T 01-11-2018 IPR013656 PAS fold-4 CDA09_05195 555117468c0d2b738a335942db21e06e 575 Gene3D G3DSA:3.30.70.270 385 555 5.7E-58 T 01-11-2018 CDA09_12130 767b0d148b04b6ca2c7d9b46a86d8895 150 SUPERFAMILY SSF55729 9 147 8.23E-20 T 01-11-2018 IPR016181 Acyl-CoA N-acyltransferase CDA09_12130 767b0d148b04b6ca2c7d9b46a86d8895 150 Pfam PF00583 Acetyltransferase (GNAT) family 30 132 7.4E-11 T 01-11-2018 IPR000182 GNAT domain CDA09_12130 767b0d148b04b6ca2c7d9b46a86d8895 150 Gene3D G3DSA:3.40.630.30 8 149 3.4E-20 T 01-11-2018 CDA09_01030 47fb6bbab525f8130f3ec640fcaa5490 210 Gene3D G3DSA:3.40.30.10 41 186 3.5E-30 T 01-11-2018 CDA09_01030 47fb6bbab525f8130f3ec640fcaa5490 210 SUPERFAMILY SSF52833 47 200 5.14E-28 T 01-11-2018 IPR036249 Thioredoxin-like superfamily CDA09_01030 47fb6bbab525f8130f3ec640fcaa5490 210 Pfam PF02630 SCO1/SenC 51 145 1.3E-13 T 01-11-2018 IPR003782 Copper chaperone SCO1/SenC Reactome: R-HSA-5628897|Reactome: R-HSA-611105 CDA09_10005 412a296e5624844660195e00cebde84d 324 Pfam PF04909 Amidohydrolase 123 312 1.3E-28 T 01-11-2018 IPR006680 Amidohydrolase-related GO:0016787 CDA09_10005 412a296e5624844660195e00cebde84d 324 SUPERFAMILY SSF51556 24 318 4.09E-43 T 01-11-2018 IPR032466 Metal-dependent hydrolase CDA09_10005 412a296e5624844660195e00cebde84d 324 Gene3D G3DSA:3.20.20.140 19 319 8.0E-50 T 01-11-2018 CDA09_07665 69886f6c555eb5dfd179834a66fd25c3 140 SUPERFAMILY SSF52172 3 127 1.71E-36 T 01-11-2018 IPR011006 CheY-like superfamily CDA09_07665 69886f6c555eb5dfd179834a66fd25c3 140 Gene3D G3DSA:3.40.50.12740 1 138 2.8E-43 T 01-11-2018 CDA09_07665 69886f6c555eb5dfd179834a66fd25c3 140 Pfam PF00072 Response regulator receiver domain 5 113 1.6E-22 T 01-11-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 CDA09_07665 69886f6c555eb5dfd179834a66fd25c3 140 SMART SM00448 3 116 5.3E-34 T 01-11-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 CDA09_22350 c9bbb745dbc2d4fa02d99674df4c70e5 547 Pfam PF13538 UvrD-like helicase C-terminal domain 484 531 2.5E-11 T 01-11-2018 IPR027785 UvrD-like helicase C-terminal domain CDA09_22350 c9bbb745dbc2d4fa02d99674df4c70e5 547 Pfam PF08378 Nuclease-related domain 21 118 5.9E-7 T 01-11-2018 IPR011528 Nuclease-related domain, NERD CDA09_22350 c9bbb745dbc2d4fa02d99674df4c70e5 547 Gene3D G3DSA:3.40.50.300 208 361 2.0E-13 T 01-11-2018 CDA09_22350 c9bbb745dbc2d4fa02d99674df4c70e5 547 SUPERFAMILY SSF52540 222 536 1.69E-30 T 01-11-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CDA09_22350 c9bbb745dbc2d4fa02d99674df4c70e5 547 Gene3D G3DSA:3.40.50.300 373 544 5.1E-5 T 01-11-2018 CDA09_19570 77a8552d7f3c1b479bb85fef1c2e5731 166 Hamap MF_00362 50S ribosomal protein L10 [rplJ]. 3 160 26.98 T 01-11-2018 IPR022973 Ribosomal protein L10 CDA09_19570 77a8552d7f3c1b479bb85fef1c2e5731 166 SUPERFAMILY SSF160369 4 159 7.45E-49 T 01-11-2018 CDA09_19570 77a8552d7f3c1b479bb85fef1c2e5731 166 Gene3D G3DSA:3.30.70.1730 5 133 6.4E-34 T 01-11-2018 CDA09_19570 77a8552d7f3c1b479bb85fef1c2e5731 166 Pfam PF00466 Ribosomal protein L10 6 100 7.6E-23 T 01-11-2018 IPR001790 Ribosomal protein L10P GO:0005622|GO:0042254 CDA09_11045 f1251893ced95519df2acf45fa3fc506 386 Gene3D G3DSA:3.40.50.300 37 298 1.2E-77 T 01-11-2018 CDA09_11045 f1251893ced95519df2acf45fa3fc506 386 SUPERFAMILY SSF52540 39 272 3.44E-76 T 01-11-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CDA09_11045 f1251893ced95519df2acf45fa3fc506 386 ProSitePatterns PS00211 ABC transporters family signature. 168 182 - T 01-11-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 CDA09_11045 f1251893ced95519df2acf45fa3fc506 386 SUPERFAMILY SSF54631 307 383 2.61E-5 T 01-11-2018 CDA09_11045 f1251893ced95519df2acf45fa3fc506 386 SMART SM00382 56 245 1.2E-17 T 01-11-2018 IPR003593 AAA+ ATPase domain CDA09_11045 f1251893ced95519df2acf45fa3fc506 386 TIGRFAM TIGR01186 proV: glycine betaine/L-proline transport ATP binding subunit 39 384 1.2E-126 T 01-11-2018 IPR005892 Glycine betaine transport ATP-binding subunit GO:0005524|GO:0016020|GO:0031460 CDA09_11045 f1251893ced95519df2acf45fa3fc506 386 Pfam PF00005 ABC transporter 49 195 1.5E-33 T 01-11-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 CDA09_19015 c12399bd8933d08abaca0504466dd376 708 Pfam PF00593 TonB dependent receptor 228 707 5.2E-55 T 01-11-2018 IPR000531 TonB-dependent receptor-like, beta-barrel CDA09_19015 c12399bd8933d08abaca0504466dd376 708 ProSitePatterns PS01156 TonB-dependent receptor proteins signature 2. 691 708 - T 01-11-2018 IPR010917 TonB-dependent receptor, conserved site CDA09_19015 c12399bd8933d08abaca0504466dd376 708 Gene3D G3DSA:2.170.130.10 39 160 1.7E-38 T 01-11-2018 IPR037066 TonB-dependent receptor, plug domain superfamily CDA09_19015 c12399bd8933d08abaca0504466dd376 708 TIGRFAM TIGR01783 TonB-siderophor: TonB-dependent siderophore receptor 57 708 1.1E-99 T 01-11-2018 IPR010105 TonB-dependent siderophore receptor GO:0005506|GO:0015891|GO:0038023 CDA09_19015 c12399bd8933d08abaca0504466dd376 708 Pfam PF07715 TonB-dependent Receptor Plug Domain 55 151 9.4E-23 T 01-11-2018 IPR012910 TonB-dependent receptor, plug domain CDA09_19015 c12399bd8933d08abaca0504466dd376 708 SUPERFAMILY SSF56935 15 708 5.5E-130 T 01-11-2018 CDA09_19015 c12399bd8933d08abaca0504466dd376 708 Gene3D G3DSA:2.40.170.20 161 708 3.0E-114 T 01-11-2018 IPR036942 TonB-dependent receptor-like, beta-barrel domain superfamily CDA09_00890 8fe1ffc0baf5768626aa6e5ae79ade01 346 Pfam PF00892 EamA-like transporter family 151 281 3.5E-6 T 01-11-2018 IPR000620 EamA domain GO:0016020|GO:0016021 CDA09_00890 8fe1ffc0baf5768626aa6e5ae79ade01 346 Pfam PF00892 EamA-like transporter family 5 138 7.9E-19 T 01-11-2018 IPR000620 EamA domain GO:0016020|GO:0016021 CDA09_00890 8fe1ffc0baf5768626aa6e5ae79ade01 346 SUPERFAMILY SSF103481 58 142 3.4E-11 T 01-11-2018 CDA09_00890 8fe1ffc0baf5768626aa6e5ae79ade01 346 SUPERFAMILY SSF103481 194 285 1.24E-9 T 01-11-2018 CDA09_00765 6c9f13fa70e334a0b990930eeed0c099 293 Pfam PF02653 Branched-chain amino acid transport system / permease component 6 277 2.7E-46 T 01-11-2018 IPR001851 ABC transporter, permease GO:0016020|GO:0022857|GO:0055085 CDA09_07075 b23080691dfd730177f897ade9982bfd 275 Pfam PF01148 Cytidylyltransferase family 4 267 2.7E-54 T 01-11-2018 CDA09_07075 b23080691dfd730177f897ade9982bfd 275 ProSitePatterns PS01315 Phosphatidate cytidylyltransferase signature. 231 257 - T 01-11-2018 IPR000374 Phosphatidate cytidylyltransferase GO:0016020|GO:0016772 KEGG: 00564+2.7.7.41|KEGG: 04070+2.7.7.41|MetaCyc: PWY-5667|MetaCyc: PWY-5981|MetaCyc: PWY-7817 CDA09_15930 7dccf21b893a1a8dd74789e99d4d769e 72 ProSitePatterns PS01143 Ribosomal protein L31 signature. 36 57 - T 01-11-2018 IPR002150 Ribosomal protein L31 GO:0003735|GO:0005622|GO:0005840|GO:0006412 CDA09_15930 7dccf21b893a1a8dd74789e99d4d769e 72 Pfam PF01197 Ribosomal protein L31 1 66 4.8E-34 T 01-11-2018 IPR002150 Ribosomal protein L31 GO:0003735|GO:0005622|GO:0005840|GO:0006412 CDA09_15930 7dccf21b893a1a8dd74789e99d4d769e 72 Gene3D G3DSA:2.30.170.50 1 70 8.2E-34 T 01-11-2018 CDA09_15930 7dccf21b893a1a8dd74789e99d4d769e 72 PRINTS PR01249 Ribosomal protein L31 signature 2 19 3.8E-22 T 01-11-2018 IPR002150 Ribosomal protein L31 GO:0003735|GO:0005622|GO:0005840|GO:0006412 CDA09_15930 7dccf21b893a1a8dd74789e99d4d769e 72 PRINTS PR01249 Ribosomal protein L31 signature 47 65 3.8E-22 T 01-11-2018 IPR002150 Ribosomal protein L31 GO:0003735|GO:0005622|GO:0005840|GO:0006412 CDA09_15930 7dccf21b893a1a8dd74789e99d4d769e 72 PRINTS PR01249 Ribosomal protein L31 signature 32 47 3.8E-22 T 01-11-2018 IPR002150 Ribosomal protein L31 GO:0003735|GO:0005622|GO:0005840|GO:0006412 CDA09_15930 7dccf21b893a1a8dd74789e99d4d769e 72 TIGRFAM TIGR00105 L31: ribosomal protein bL31 1 67 2.3E-35 T 01-11-2018 IPR002150 Ribosomal protein L31 GO:0003735|GO:0005622|GO:0005840|GO:0006412 CDA09_15930 7dccf21b893a1a8dd74789e99d4d769e 72 Hamap MF_00501 50S ribosomal protein L31 [rpmE]. 1 69 30.289 T 01-11-2018 IPR027491 Ribosomal protein L31 type A GO:0003735|GO:0005622|GO:0005840|GO:0006412 CDA09_15930 7dccf21b893a1a8dd74789e99d4d769e 72 SUPERFAMILY SSF143800 1 67 2.83E-27 T 01-11-2018 IPR034704 L28p-like Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 CDA09_14015 4684298077b75bcc500db589bb178be8 98 Pfam PF09686 Plasmid protein of unknown function (Plasmid_RAQPRD) 24 96 4.2E-19 T 01-11-2018 IPR019110 Uncharacterised protein family, RAQPRD CDA09_20080 ae9587f689a9f30c9213001b6280e1e8 377 Pfam PF01435 Peptidase family M48 154 326 7.3E-6 T 01-11-2018 IPR001915 Peptidase M48 GO:0004222|GO:0006508 CDA09_14785 738def02a7463c203ed06bc7f3e93a16 107 SUPERFAMILY SSF50022 1 103 1.23E-30 T 01-11-2018 IPR036922 Rieske [2Fe-2S] iron-sulphur domain superfamily GO:0016491|GO:0051537|GO:0055114 CDA09_14785 738def02a7463c203ed06bc7f3e93a16 107 Pfam PF13806 Rieske-like [2Fe-2S] domain 3 101 4.9E-15 T 01-11-2018 IPR012748 Nitrite reductase [NAD(P)H] small subunit, NirD GO:0008942|GO:0042128|GO:0055114 CDA09_14785 738def02a7463c203ed06bc7f3e93a16 107 Gene3D G3DSA:2.102.10.10 1 106 2.2E-32 T 01-11-2018 IPR036922 Rieske [2Fe-2S] iron-sulphur domain superfamily GO:0016491|GO:0051537|GO:0055114 CDA09_00300 6d2e974832b7839d2d66d3cb80eae1f3 112 Pfam PF14384 BrnA antitoxin of type II toxin-antitoxin system 44 106 7.2E-21 T 01-11-2018 IPR025528 BrnA antitoxin of type II toxin-antitoxin system CDA09_05055 f893a35dfda6f5e9ca5f9542efc79991 64 Pfam PF11127 Protein of unknown function (DUF2892) 1 61 5.1E-23 T 01-11-2018 IPR021309 Protein of unknown function DUF2892 CDA09_19165 93571d8b951695b4b9e50a8b04a4b60e 93 TIGRFAM TIGR02606 antidote_CC2985: putative addiction module antidote protein, CC2985 family 3 70 1.0E-19 T 01-11-2018 IPR022789 Antitoxin ParD CDA09_19165 93571d8b951695b4b9e50a8b04a4b60e 93 SUPERFAMILY SSF47598 1 44 1.22E-9 T 01-11-2018 IPR010985 Ribbon-helix-helix GO:0006355 CDA09_19165 93571d8b951695b4b9e50a8b04a4b60e 93 Pfam PF03693 Bacterial antitoxin of ParD toxin-antitoxin type II system and RHH 6 60 3.5E-10 T 01-11-2018 IPR022789 Antitoxin ParD CDA09_19165 93571d8b951695b4b9e50a8b04a4b60e 93 Gene3D G3DSA:1.10.8.1250 10 81 7.7E-15 T 01-11-2018 IPR038296 Antitoxin ParD superfamily CDA09_18320 f6078d2d48f762a0e48f666de88bb526 311 ProSitePatterns PS00583 pfkB family of carbohydrate kinases signature 1. 47 71 - T 01-11-2018 IPR002173 Carbohydrate/puine kinase, PfkB, conserved site GO:0016773 CDA09_18320 f6078d2d48f762a0e48f666de88bb526 311 Pfam PF00294 pfkB family carbohydrate kinase 34 294 4.6E-40 T 01-11-2018 IPR011611 Carbohydrate kinase PfkB CDA09_18320 f6078d2d48f762a0e48f666de88bb526 311 SUPERFAMILY SSF53613 1 297 1.56E-66 T 01-11-2018 IPR029056 Ribokinase-like CDA09_18320 f6078d2d48f762a0e48f666de88bb526 311 Gene3D G3DSA:3.40.1190.20 1 310 1.4E-111 T 01-11-2018 IPR029056 Ribokinase-like CDA09_11870 f42d943d1651359277d235b5b14042cd 111 Gene3D G3DSA:3.40.30.10 1 108 8.7E-20 T 01-11-2018 CDA09_11870 f42d943d1651359277d235b5b14042cd 111 SUPERFAMILY SSF52833 19 103 7.91E-18 T 01-11-2018 IPR036249 Thioredoxin-like superfamily CDA09_11870 f42d943d1651359277d235b5b14042cd 111 Pfam PF00085 Thioredoxin 14 102 2.2E-10 T 01-11-2018 IPR013766 Thioredoxin domain GO:0045454 CDA09_11680 84748380fda0a8b40bbe064a49543a44 137 SMART SM00226 5 133 1.5E-24 T 01-11-2018 IPR023485 Phosphotyrosine protein phosphatase I CDA09_11680 84748380fda0a8b40bbe064a49543a44 137 SUPERFAMILY SSF52788 4 128 1.83E-33 T 01-11-2018 IPR036196 Phosphotyrosine protein phosphatase I superfamily CDA09_11680 84748380fda0a8b40bbe064a49543a44 137 Pfam PF01451 Low molecular weight phosphotyrosine protein phosphatase 7 127 2.2E-19 T 01-11-2018 IPR023485 Phosphotyrosine protein phosphatase I CDA09_11680 84748380fda0a8b40bbe064a49543a44 137 Gene3D G3DSA:3.40.50.2300 2 130 3.2E-33 T 01-11-2018 CDA09_22580 599dfbcbdac455df7085dbce33fb253c 256 Pfam PF08378 Nuclease-related domain 37 147 4.6E-29 T 01-11-2018 IPR011528 Nuclease-related domain, NERD CDA09_22580 599dfbcbdac455df7085dbce33fb253c 256 Pfam PF01396 Topoisomerase DNA binding C4 zinc finger 218 255 2.2E-11 T 01-11-2018 IPR013498 DNA topoisomerase, type IA, zn finger GO:0003677|GO:0003916|GO:0005694|GO:0006265 Reactome: R-HSA-5685938|Reactome: R-HSA-5685942|Reactome: R-HSA-5693554|Reactome: R-HSA-5693568|Reactome: R-HSA-5693579|Reactome: R-HSA-5693607|Reactome: R-HSA-5693616|Reactome: R-HSA-6804756|Reactome: R-HSA-69473|Reactome: R-HSA-912446 CDA09_22580 599dfbcbdac455df7085dbce33fb253c 256 SUPERFAMILY SSF57783 212 255 1.14E-7 T 01-11-2018 CDA09_15300 3b5fbdc8c389ad4733d9f3cb6ffdf503 337 Gene3D G3DSA:3.40.718.10 2 336 2.0E-129 T 01-11-2018 CDA09_15300 3b5fbdc8c389ad4733d9f3cb6ffdf503 337 Pfam PF02504 Fatty acid synthesis protein 3 324 3.3E-109 T 01-11-2018 IPR003664 Fatty acid synthesis PlsX protein GO:0003824|GO:0006633|GO:0016747 CDA09_15300 3b5fbdc8c389ad4733d9f3cb6ffdf503 337 TIGRFAM TIGR00182 plsX: fatty acid/phospholipid synthesis protein PlsX 5 330 1.4E-111 T 01-11-2018 IPR012281 Phospholipid biosynthesis protein, PlsX-like GO:0006633 CDA09_15300 3b5fbdc8c389ad4733d9f3cb6ffdf503 337 PIRSF PIRSF002465 1 336 7.7E-130 T 01-11-2018 IPR012281 Phospholipid biosynthesis protein, PlsX-like GO:0006633 CDA09_15300 3b5fbdc8c389ad4733d9f3cb6ffdf503 337 Hamap MF_00019 Phosphate acyltransferase [plsX]. 1 337 153.491 T 01-11-2018 IPR012281 Phospholipid biosynthesis protein, PlsX-like GO:0006633 CDA09_15300 3b5fbdc8c389ad4733d9f3cb6ffdf503 337 SUPERFAMILY SSF53659 3 330 1.77E-105 T 01-11-2018 CDA09_14425 ca60c0494118f609821bd374b472909c 225 ProSitePatterns PS00211 ABC transporters family signature. 141 155 - T 01-11-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 CDA09_14425 ca60c0494118f609821bd374b472909c 225 SMART SM00382 29 217 8.5E-16 T 01-11-2018 IPR003593 AAA+ ATPase domain CDA09_14425 ca60c0494118f609821bd374b472909c 225 Gene3D G3DSA:3.40.50.300 1 225 3.2E-62 T 01-11-2018 CDA09_14425 ca60c0494118f609821bd374b472909c 225 SUPERFAMILY SSF52540 1 219 2.13E-62 T 01-11-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CDA09_14425 ca60c0494118f609821bd374b472909c 225 Pfam PF00005 ABC transporter 21 168 1.2E-31 T 01-11-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 CDA09_22225 507d5dd35fb4a0a1238504fca3c2276d 166 Gene3D G3DSA:2.30.110.10 3 165 5.9E-48 T 01-11-2018 IPR012349 FMN-binding split barrel GO:0048037 CDA09_22225 507d5dd35fb4a0a1238504fca3c2276d 166 SMART SM00903 19 162 7.0E-60 T 01-11-2018 IPR002563 Flavin reductase like domain GO:0010181 CDA09_22225 507d5dd35fb4a0a1238504fca3c2276d 166 SUPERFAMILY SSF50475 13 163 1.08E-47 T 01-11-2018 CDA09_22225 507d5dd35fb4a0a1238504fca3c2276d 166 Pfam PF01613 Flavin reductase like domain 21 163 2.9E-34 T 01-11-2018 IPR002563 Flavin reductase like domain GO:0010181 CDA09_12025 d89d06ab37052dfb2ae93e7e13c47fac 308 SUPERFAMILY SSF53686 8 303 6.16E-71 T 01-11-2018 IPR036052 Tryptophan synthase beta subunit-like PLP-dependent enzyme CDA09_12025 d89d06ab37052dfb2ae93e7e13c47fac 308 Pfam PF00291 Pyridoxal-phosphate dependent enzyme 15 281 5.8E-55 T 01-11-2018 IPR001926 Pyridoxal-phosphate dependent enzyme CDA09_12025 d89d06ab37052dfb2ae93e7e13c47fac 308 Gene3D G3DSA:3.40.50.1100 15 301 1.0E-82 T 01-11-2018 CDA09_12025 d89d06ab37052dfb2ae93e7e13c47fac 308 Gene3D G3DSA:3.40.50.1100 49 151 1.0E-82 T 01-11-2018 CDA09_04945 dd7296e643561897e6062942f6ccd0f5 106 TIGRFAM TIGR00365 TIGR00365: monothiol glutaredoxin, Grx4 family 4 101 8.9E-47 T 01-11-2018 IPR004480 Monothiol glutaredoxin-related CDA09_04945 dd7296e643561897e6062942f6ccd0f5 106 Gene3D G3DSA:3.40.30.10 6 103 1.5E-33 T 01-11-2018 CDA09_04945 dd7296e643561897e6062942f6ccd0f5 106 Pfam PF00462 Glutaredoxin 16 81 3.7E-18 T 01-11-2018 IPR002109 Glutaredoxin GO:0009055|GO:0015035|GO:0045454 CDA09_04945 dd7296e643561897e6062942f6ccd0f5 106 PIRSF PIRSF005894 1 106 1.6E-49 T 01-11-2018 IPR014434 Monothiol glutaredoxin GO:0015036 Reactome: R-HSA-1362409 CDA09_04945 dd7296e643561897e6062942f6ccd0f5 106 SUPERFAMILY SSF52833 1 104 9.4E-36 T 01-11-2018 IPR036249 Thioredoxin-like superfamily CDA09_21320 97836093fb70b5b695d54c899e741ef3 305 SMART SM00331 8 243 1.1E-11 T 01-11-2018 IPR001932 PPM-type phosphatase domain GO:0003824 KEGG: 04658+3.1.3.16|KEGG: 04660+3.1.3.16 CDA09_21320 97836093fb70b5b695d54c899e741ef3 305 SMART SM00332 2 241 2.3E-5 T 01-11-2018 IPR001932 PPM-type phosphatase domain GO:0003824 KEGG: 04658+3.1.3.16|KEGG: 04660+3.1.3.16 CDA09_21320 97836093fb70b5b695d54c899e741ef3 305 Pfam PF13672 Protein phosphatase 2C 8 197 2.0E-17 T 01-11-2018 CDA09_21320 97836093fb70b5b695d54c899e741ef3 305 Gene3D G3DSA:3.60.40.10 1 247 1.0E-50 T 01-11-2018 IPR036457 PPM-type phosphatase domain superfamily KEGG: 04658+3.1.3.16|KEGG: 04660+3.1.3.16 CDA09_21320 97836093fb70b5b695d54c899e741ef3 305 SUPERFAMILY SSF81606 2 244 5.75E-53 T 01-11-2018 IPR036457 PPM-type phosphatase domain superfamily KEGG: 04658+3.1.3.16|KEGG: 04660+3.1.3.16 CDA09_19715 d212eb9de5f5c851b84980ac312dbcbe 269 Gene3D G3DSA:3.40.50.300 3 248 4.3E-52 T 01-11-2018 CDA09_19715 d212eb9de5f5c851b84980ac312dbcbe 269 SMART SM00382 33 224 2.7E-7 T 01-11-2018 IPR003593 AAA+ ATPase domain CDA09_19715 d212eb9de5f5c851b84980ac312dbcbe 269 Pfam PF00005 ABC transporter 24 174 5.2E-25 T 01-11-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 CDA09_19715 d212eb9de5f5c851b84980ac312dbcbe 269 SUPERFAMILY SSF52540 21 245 8.8E-47 T 01-11-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CDA09_17650 32cd2f0aeda8fdc9e93f57b66fe659ba 251 Pfam PF01863 Protein of unknown function DUF45 33 232 4.1E-54 T 01-11-2018 IPR002725 Protein of unknown function DUF45 CDA09_17650 32cd2f0aeda8fdc9e93f57b66fe659ba 251 Gene3D G3DSA:3.30.2010.10 152 233 1.4E-16 T 01-11-2018 CDA09_03795 e66825b5dc89f4c23109c5a09545f3e2 563 SUPERFAMILY SSF52091 448 547 1.39E-16 T 01-11-2018 IPR036513 STAS domain superfamily CDA09_03795 e66825b5dc89f4c23109c5a09545f3e2 563 Pfam PF01740 STAS domain 445 546 2.0E-13 T 01-11-2018 IPR002645 STAS domain CDA09_03795 e66825b5dc89f4c23109c5a09545f3e2 563 Pfam PF00916 Sulfate permease family 21 373 1.2E-87 T 01-11-2018 IPR011547 SLC26A/SulP transporter domain GO:0008272|GO:0015116|GO:0016021 CDA09_03795 e66825b5dc89f4c23109c5a09545f3e2 563 Gene3D G3DSA:3.30.750.24 438 548 1.9E-24 T 01-11-2018 IPR036513 STAS domain superfamily CDA09_03470 6aeba4e9c7c6a1e122997b17481d195b 155 TIGRFAM TIGR04488 SoxY_true_GGCGG: thiosulfate oxidation carrier protein SoxY 4 154 1.7E-39 T 01-11-2018 IPR016568 Sulphur oxidation, SoxY CDA09_03470 6aeba4e9c7c6a1e122997b17481d195b 155 PIRSF PIRSF010312 1 155 4.9E-35 T 01-11-2018 IPR016568 Sulphur oxidation, SoxY CDA09_03470 6aeba4e9c7c6a1e122997b17481d195b 155 Pfam PF13501 Sulfur oxidation protein SoxY 52 153 1.2E-28 T 01-11-2018 IPR032711 Ig-like SoxY domain CDA09_03470 6aeba4e9c7c6a1e122997b17481d195b 155 Gene3D G3DSA:2.60.40.2470 33 155 1.3E-37 T 01-11-2018 IPR038162 Ig-like SoxY domain superfamily CDA09_11695 7bf634c2b7167157ae4035cbb123eb8f 337 SUPERFAMILY SSF51735 138 314 1.74E-46 T 01-11-2018 IPR036291 NAD(P)-binding domain superfamily CDA09_11695 7bf634c2b7167157ae4035cbb123eb8f 337 SMART SM00829 11 335 5.2E-17 T 01-11-2018 IPR020843 Polyketide synthase, enoylreductase domain GO:0016491 CDA09_11695 7bf634c2b7167157ae4035cbb123eb8f 337 Gene3D G3DSA:3.40.50.720 143 285 7.6E-105 T 01-11-2018 CDA09_11695 7bf634c2b7167157ae4035cbb123eb8f 337 SUPERFAMILY SSF50129 9 167 2.99E-36 T 01-11-2018 IPR011032 GroES-like superfamily CDA09_11695 7bf634c2b7167157ae4035cbb123eb8f 337 Pfam PF08240 Alcohol dehydrogenase GroES-like domain 27 129 1.4E-11 T 01-11-2018 IPR013154 Alcohol dehydrogenase, N-terminal GO:0055114 CDA09_11695 7bf634c2b7167157ae4035cbb123eb8f 337 Gene3D G3DSA:3.90.180.10 18 328 7.6E-105 T 01-11-2018 CDA09_11695 7bf634c2b7167157ae4035cbb123eb8f 337 Pfam PF00107 Zinc-binding dehydrogenase 172 300 5.4E-31 T 01-11-2018 IPR013149 Alcohol dehydrogenase, C-terminal GO:0055114 CDA09_22090 8de6613222f2d2f66d90966e76678b52 369 SUPERFAMILY SSF53335 27 178 6.12E-23 T 01-11-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase CDA09_22090 8de6613222f2d2f66d90966e76678b52 369 Gene3D G3DSA:3.40.50.150 22 205 4.6E-18 T 01-11-2018 CDA09_22090 8de6613222f2d2f66d90966e76678b52 369 ProSitePatterns PS00092 N-6 Adenine-specific DNA methylases signature. 104 110 - T 01-11-2018 IPR002052 DNA methylase, N-6 adenine-specific, conserved site GO:0003676|GO:0008168|GO:0032259 CDA09_22090 8de6613222f2d2f66d90966e76678b52 369 PRINTS PR00507 N12 class N6 adenine-specific DNA methyltransferase signature 41 55 5.8E-8 T 01-11-2018 CDA09_22090 8de6613222f2d2f66d90966e76678b52 369 PRINTS PR00507 N12 class N6 adenine-specific DNA methyltransferase signature 130 154 5.8E-8 T 01-11-2018 CDA09_22090 8de6613222f2d2f66d90966e76678b52 369 PRINTS PR00507 N12 class N6 adenine-specific DNA methyltransferase signature 101 113 5.8E-8 T 01-11-2018 CDA09_18085 334eef829f0912fb0a4d2b39bdc52203 370 TIGRFAM TIGR00449 tgt_general: tRNA-guanine family transglycosylase 3 363 7.1E-158 T 01-11-2018 IPR002616 tRNA-guanine(15) transglycosylase-like GO:0006400|GO:0016763 MetaCyc: PWY-6700|Reactome: R-HSA-6782315 CDA09_18085 334eef829f0912fb0a4d2b39bdc52203 370 TIGRFAM TIGR00430 Q_tRNA_tgt: tRNA-guanine transglycosylase 3 363 4.7E-167 T 01-11-2018 IPR004803 tRNA-guanine transglycosylase GO:0008479|GO:0101030 MetaCyc: PWY-6700|Reactome: R-HSA-6782315 CDA09_18085 334eef829f0912fb0a4d2b39bdc52203 370 Hamap MF_00168 Queuine tRNA-ribosyltransferase [tgt]. 1 364 55.69 T 01-11-2018 IPR004803 tRNA-guanine transglycosylase GO:0008479|GO:0101030 MetaCyc: PWY-6700|Reactome: R-HSA-6782315 CDA09_18085 334eef829f0912fb0a4d2b39bdc52203 370 Pfam PF01702 Queuine tRNA-ribosyltransferase 127 361 1.5E-92 T 01-11-2018 IPR002616 tRNA-guanine(15) transglycosylase-like GO:0006400|GO:0016763 MetaCyc: PWY-6700|Reactome: R-HSA-6782315 CDA09_18085 334eef829f0912fb0a4d2b39bdc52203 370 Gene3D G3DSA:3.20.20.105 1 368 3.4E-166 T 01-11-2018 IPR036511 Queuine tRNA-ribosyltransferase-like GO:0006400|GO:0016763 MetaCyc: PWY-6700|Reactome: R-HSA-6782315 CDA09_18085 334eef829f0912fb0a4d2b39bdc52203 370 SUPERFAMILY SSF51713 1 362 2.49E-160 T 01-11-2018 IPR036511 Queuine tRNA-ribosyltransferase-like GO:0006400|GO:0016763 MetaCyc: PWY-6700|Reactome: R-HSA-6782315 CDA09_06700 8306c4a62fd019bc143ba78f9c71a585 101 Pfam PF04316 Anti-sigma-28 factor, FlgM 38 91 1.2E-14 T 01-11-2018 IPR031316 Anti-sigma-28 factor FlgM, C-terminal CDA09_06700 8306c4a62fd019bc143ba78f9c71a585 101 TIGRFAM TIGR03824 FlgM_jcvi: flagellar biosynthesis anti-sigma factor FlgM 1 93 1.2E-22 T 01-11-2018 IPR007412 Anti-sigma-28 factor, FlgM GO:0045892 CDA09_06700 8306c4a62fd019bc143ba78f9c71a585 101 SUPERFAMILY SSF101498 12 93 8.24E-16 T 01-11-2018 IPR035890 Anti-sigma-28 factor FlgM superfamily CDA09_03895 c38fca87725b167b180656714f62ba49 251 SUPERFAMILY SSF160950 2 249 3.53E-88 T 01-11-2018 IPR036268 ZapD domain superfamily CDA09_03895 c38fca87725b167b180656714f62ba49 251 Gene3D G3DSA:1.10.3900.10 10 177 4.0E-86 T 01-11-2018 CDA09_03895 c38fca87725b167b180656714f62ba49 251 Pfam PF07072 Cell division protein 16 225 2.9E-81 T 01-11-2018 IPR009777 Cell division protein ZapD CDA09_03895 c38fca87725b167b180656714f62ba49 251 Hamap MF_01092 Cell division protein ZapD [zapD]. 1 249 34.355 T 01-11-2018 IPR009777 Cell division protein ZapD CDA09_03895 c38fca87725b167b180656714f62ba49 251 Gene3D G3DSA:2.60.440.10 4 249 4.0E-86 T 01-11-2018 IPR027462 Z ring-associated protein D, C-terminal CDA09_08490 429ef5c998373c7d65afb12a67f27ff6 387 Gene3D G3DSA:3.40.50.2300 141 367 1.5E-116 T 01-11-2018 CDA09_08490 429ef5c998373c7d65afb12a67f27ff6 387 Pfam PF13458 Periplasmic binding protein 24 364 4.8E-70 T 01-11-2018 IPR028081 Leucine-binding protein domain CDA09_08490 429ef5c998373c7d65afb12a67f27ff6 387 Gene3D G3DSA:3.40.50.2300 26 356 1.5E-116 T 01-11-2018 CDA09_08490 429ef5c998373c7d65afb12a67f27ff6 387 SUPERFAMILY SSF53822 24 374 2.39E-86 T 01-11-2018 IPR028082 Periplasmic binding protein-like I CDA09_04905 7cd40a34ecc8099980acc4e3382d6c96 340 Pfam PF01548 Transposase 6 146 6.0E-12 T 01-11-2018 IPR002525 Transposase, IS111A/IS1328/IS1533, N-terminal GO:0003677|GO:0004803|GO:0006313 CDA09_04905 7cd40a34ecc8099980acc4e3382d6c96 340 Pfam PF02371 Transposase IS116/IS110/IS902 family 212 286 2.2E-25 T 01-11-2018 IPR003346 Transposase, IS116/IS110/IS902 GO:0003677|GO:0004803|GO:0006313 CDA09_06195 3b607624916be6d8f2a2d972ae34d7c5 213 Gene3D G3DSA:3.40.50.300 7 203 8.4E-45 T 01-11-2018 CDA09_06195 3b607624916be6d8f2a2d972ae34d7c5 213 SUPERFAMILY SSF52540 1 208 4.54E-43 T 01-11-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CDA09_06195 3b607624916be6d8f2a2d972ae34d7c5 213 Pfam PF01712 Deoxynucleoside kinase 8 200 3.9E-36 T 01-11-2018 IPR031314 Deoxynucleoside kinase domain CDA09_06195 3b607624916be6d8f2a2d972ae34d7c5 213 PIRSF PIRSF000705 1 208 2.2E-58 T 01-11-2018 IPR002624 Deoxynucleoside kinase GO:0005524|GO:0006139|GO:0019206 CDA09_07110 b8b572ea47ade37b46a689d1d9136705 256 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 103 137 8.4E-9 T 01-11-2018 IPR001451 Hexapeptide repeat CDA09_07110 b8b572ea47ade37b46a689d1d9136705 256 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 11 46 4.5E-10 T 01-11-2018 IPR001451 Hexapeptide repeat CDA09_07110 b8b572ea47ade37b46a689d1d9136705 256 TIGRFAM TIGR01852 lipid_A_lpxA: acyl-[acyl-carrier-protein]-UDP-N-acetylglucosamine O-acyltransferase 2 255 5.2E-102 T 01-11-2018 IPR010137 Acyl-[acyl-carrier-protein]--UDP-N-acetylglucosamine O-acyltransferase GO:0008610|GO:0008780 KEGG: 00540+2.3.1.129 CDA09_07110 b8b572ea47ade37b46a689d1d9136705 256 Pfam PF13720 Udp N-acetylglucosamine O-acyltransferase; Domain 2 174 255 9.7E-29 T 01-11-2018 IPR029098 UDP N-acetylglucosamine O-acyltransferase, C-terminal KEGG: 00540+2.3.1.129 CDA09_07110 b8b572ea47ade37b46a689d1d9136705 256 Hamap MF_00387 Acyl-[acyl-carrier-protein]--UDP-N-acetylglucosamine O-acyltransferase [lpxA]. 1 256 44.327 T 01-11-2018 IPR010137 Acyl-[acyl-carrier-protein]--UDP-N-acetylglucosamine O-acyltransferase GO:0008610|GO:0008780 KEGG: 00540+2.3.1.129 CDA09_07110 b8b572ea47ade37b46a689d1d9136705 256 PIRSF PIRSF000456 1 256 2.7E-103 T 01-11-2018 IPR010137 Acyl-[acyl-carrier-protein]--UDP-N-acetylglucosamine O-acyltransferase GO:0008610|GO:0008780 KEGG: 00540+2.3.1.129 CDA09_07110 b8b572ea47ade37b46a689d1d9136705 256 SUPERFAMILY SSF51161 1 256 3.96E-80 T 01-11-2018 IPR011004 Trimeric LpxA-like superfamily CDA09_07110 b8b572ea47ade37b46a689d1d9136705 256 Gene3D G3DSA:2.160.10.10 1 188 5.0E-55 T 01-11-2018 CDA09_07110 b8b572ea47ade37b46a689d1d9136705 256 Gene3D G3DSA:1.20.1180.10 191 256 1.7E-24 T 01-11-2018 IPR037157 UDP-N-acetylglucosamine O-acyltransferase, C-terminal domain superfamily KEGG: 00540+2.3.1.129 CDA09_15505 df659843f940d95af7ac1536a0adaf93 215 Gene3D G3DSA:3.30.70.20 1 38 6.5E-10 T 01-11-2018 CDA09_15505 df659843f940d95af7ac1536a0adaf93 215 Gene3D G3DSA:3.30.70.20 39 215 1.9E-55 T 01-11-2018 CDA09_15505 df659843f940d95af7ac1536a0adaf93 215 Pfam PF12800 4Fe-4S binding domain 12 24 0.0087 T 01-11-2018 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain CDA09_15505 df659843f940d95af7ac1536a0adaf93 215 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 90 101 - T 01-11-2018 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site CDA09_15505 df659843f940d95af7ac1536a0adaf93 215 SUPERFAMILY SSF54862 1 211 2.83E-65 T 01-11-2018 CDA09_15505 df659843f940d95af7ac1536a0adaf93 215 Pfam PF13247 4Fe-4S dicluster domain 52 108 1.4E-12 T 01-11-2018 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain CDA09_09710 564e6ecff8972f44b3af5e9b4e5ca3e8 253 Gene3D G3DSA:3.40.50.620 1 252 1.2E-85 T 01-11-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold CDA09_09710 564e6ecff8972f44b3af5e9b4e5ca3e8 253 SMART SM00893 23 215 2.4E-60 T 01-11-2018 IPR014730 Electron transfer flavoprotein, alpha/beta-subunit, N-terminal Reactome: R-HSA-611105 CDA09_09710 564e6ecff8972f44b3af5e9b4e5ca3e8 253 PIRSF PIRSF000090 1 253 7.3E-83 T 01-11-2018 IPR012255 Electron transfer flavoprotein, beta subunit GO:0009055 Reactome: R-HSA-611105|Reactome: R-HSA-8876725 CDA09_09710 564e6ecff8972f44b3af5e9b4e5ca3e8 253 ProSitePatterns PS01065 Electron transfer flavoprotein beta-subunit signature. 159 179 - T 01-11-2018 IPR000049 Electron transfer flavoprotein, beta-subunit, conserved site GO:0009055 Reactome: R-HSA-611105|Reactome: R-HSA-8876725 CDA09_09710 564e6ecff8972f44b3af5e9b4e5ca3e8 253 Pfam PF01012 Electron transfer flavoprotein domain 29 209 2.4E-44 T 01-11-2018 IPR014730 Electron transfer flavoprotein, alpha/beta-subunit, N-terminal Reactome: R-HSA-611105 CDA09_09710 564e6ecff8972f44b3af5e9b4e5ca3e8 253 SUPERFAMILY SSF52402 2 246 2.72E-82 T 01-11-2018 CDA09_03465 c42a1d033cd32cc5dce09fb026e86264 107 SUPERFAMILY SSF46626 31 101 2.63E-14 T 01-11-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 CDA09_03465 c42a1d033cd32cc5dce09fb026e86264 107 Gene3D G3DSA:1.10.760.10 25 98 1.6E-16 T 01-11-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 CDA09_21575 615de5766e369d510409226076696583 315 Gene3D G3DSA:3.40.1090.10 102 225 4.0E-17 T 01-11-2018 CDA09_21575 615de5766e369d510409226076696583 315 Pfam PF01734 Patatin-like phospholipase 19 177 1.6E-22 T 01-11-2018 IPR002641 Patatin-like phospholipase domain GO:0006629 CDA09_21575 615de5766e369d510409226076696583 315 Gene3D G3DSA:3.40.1090.20 16 79 8.5E-9 T 01-11-2018 CDA09_21575 615de5766e369d510409226076696583 315 SUPERFAMILY SSF52151 15 308 9.07E-56 T 01-11-2018 IPR016035 Acyl transferase/acyl hydrolase/lysophospholipase CDA09_05250 40da3439939006ee55736edac39ad241 228 Gene3D G3DSA:3.40.50.2020 113 226 1.2E-18 T 01-11-2018 CDA09_05250 40da3439939006ee55736edac39ad241 228 SUPERFAMILY SSF53271 56 226 3.93E-33 T 01-11-2018 IPR029057 Phosphoribosyltransferase-like CDA09_05250 40da3439939006ee55736edac39ad241 228 Pfam PF00156 Phosphoribosyl transferase domain 132 217 1.6E-10 T 01-11-2018 IPR000836 Phosphoribosyltransferase domain GO:0009116 CDA09_10715 54ce1d2c7fa1875336b4eecf3532fe7d 116 Pfam PF02411 MerT mercuric transport protein 5 116 6.4E-56 T 01-11-2018 IPR003457 Mercuric transport protein MerT GO:0015097|GO:0015694|GO:0016020 CDA09_12400 2163d4cad6328c145c2d8f02c4e0fce5 288 Pfam PF00892 EamA-like transporter family 149 281 3.5E-17 T 01-11-2018 IPR000620 EamA domain GO:0016020|GO:0016021 CDA09_12400 2163d4cad6328c145c2d8f02c4e0fce5 288 Pfam PF00892 EamA-like transporter family 8 140 1.5E-17 T 01-11-2018 IPR000620 EamA domain GO:0016020|GO:0016021 CDA09_12400 2163d4cad6328c145c2d8f02c4e0fce5 288 SUPERFAMILY SSF103481 201 284 1.83E-12 T 01-11-2018 CDA09_12400 2163d4cad6328c145c2d8f02c4e0fce5 288 SUPERFAMILY SSF103481 44 143 5.23E-15 T 01-11-2018 CDA09_10640 ce14abfa43fe76b8cda653db331caff1 129 TIGRFAM TIGR00778 ahpD_dom: alkylhydroperoxidase AhpD family core domain 60 107 4.2E-20 T 01-11-2018 IPR004675 Alkylhydroperoxidase AhpD core GO:0051920|GO:0055114 KEGG: 00480+1.11.1.15 CDA09_10640 ce14abfa43fe76b8cda653db331caff1 129 Pfam PF02627 Carboxymuconolactone decarboxylase family 51 123 1.0E-20 T 01-11-2018 IPR003779 Carboxymuconolactone decarboxylase-like GO:0051920|GO:0055114 KEGG: 00480+1.11.1.15 CDA09_10640 ce14abfa43fe76b8cda653db331caff1 129 SUPERFAMILY SSF69118 1 127 1.44E-38 T 01-11-2018 IPR029032 AhpD-like Reactome: R-HSA-5628897 CDA09_10640 ce14abfa43fe76b8cda653db331caff1 129 Gene3D G3DSA:1.20.1290.10 1 128 2.7E-50 T 01-11-2018 IPR029032 AhpD-like Reactome: R-HSA-5628897 CDA09_16090 17f4d1d1e0e7176953fe1f83381aee3e 671 Gene3D G3DSA:1.10.287.950 341 671 2.5E-76 T 01-11-2018 CDA09_16090 17f4d1d1e0e7176953fe1f83381aee3e 671 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 535 564 1.5E-22 T 01-11-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 CDA09_16090 17f4d1d1e0e7176953fe1f83381aee3e 671 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 141 166 1.5E-22 T 01-11-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 CDA09_16090 17f4d1d1e0e7176953fe1f83381aee3e 671 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 506 533 1.5E-22 T 01-11-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 CDA09_16090 17f4d1d1e0e7176953fe1f83381aee3e 671 SMART SM00304 341 393 2.8E-8 T 01-11-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 CDA09_16090 17f4d1d1e0e7176953fe1f83381aee3e 671 Pfam PF00672 HAMP domain 342 387 4.5E-8 T 01-11-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 CDA09_16090 17f4d1d1e0e7176953fe1f83381aee3e 671 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 455 635 8.2E-47 T 01-11-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 CDA09_16090 17f4d1d1e0e7176953fe1f83381aee3e 671 SUPERFAMILY SSF58104 361 670 1.57E-75 T 01-11-2018 CDA09_16090 17f4d1d1e0e7176953fe1f83381aee3e 671 SMART SM00283 408 669 3.0E-76 T 01-11-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 CDA09_18710 40099a6dba3bd8250c3ebc7eab475a9a 171 SUPERFAMILY SSF50341 24 163 3.66E-21 T 01-11-2018 IPR036061 CheW-like domain superfamily GO:0006935|GO:0007165 CDA09_18710 40099a6dba3bd8250c3ebc7eab475a9a 171 Pfam PF01584 CheW-like domain 29 161 1.0E-14 T 01-11-2018 IPR002545 CheW-like domain GO:0006935|GO:0007165 CDA09_18710 40099a6dba3bd8250c3ebc7eab475a9a 171 Gene3D G3DSA:2.40.50.180 48 135 4.5E-9 T 01-11-2018 CDA09_18710 40099a6dba3bd8250c3ebc7eab475a9a 171 SMART SM00260 24 160 0.008 T 01-11-2018 IPR002545 CheW-like domain GO:0006935|GO:0007165 CDA09_04255 db4d1456506211d8e3abb5d923d8ec69 94 Gene3D G3DSA:3.30.750.24 5 94 6.0E-14 T 01-11-2018 IPR036513 STAS domain superfamily CDA09_04255 db4d1456506211d8e3abb5d923d8ec69 94 SUPERFAMILY SSF52091 7 91 8.83E-15 T 01-11-2018 IPR036513 STAS domain superfamily CDA09_04255 db4d1456506211d8e3abb5d923d8ec69 94 Pfam PF13466 STAS domain 9 87 2.1E-19 T 01-11-2018 IPR002645 STAS domain CDA09_20460 1f630a5abfd17f90e0bf5b5b22de07c7 259 Pfam PF02698 DUF218 domain 88 251 2.3E-26 T 01-11-2018 IPR003848 Domain of unknown function DUF218 CDA09_20460 1f630a5abfd17f90e0bf5b5b22de07c7 259 Gene3D G3DSA:3.40.50.620 119 219 2.0E-5 T 01-11-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold CDA09_20735 2a330ace5691ccf443369cc39af7af4d 389 TIGRFAM TIGR02570 cas7_GSU0053: CRISPR-associated protein GSU0053/csb1, Dpsyc system 27 189 3.5E-18 T 01-11-2018 IPR013403 CRISPR-associated protein GSU0053 CDA09_20735 2a330ace5691ccf443369cc39af7af4d 389 Pfam PF09617 CRISPR-associated protein GSU0053 (Cas_GSU0053) 18 183 8.9E-37 T 01-11-2018 IPR013403 CRISPR-associated protein GSU0053 CDA09_09915 af55d2ae3145a98305181d632e9ca39c 374 Pfam PF01936 NYN domain 9 141 6.3E-29 T 01-11-2018 IPR021139 NYN domain, limkain-b1-type CDA09_09915 af55d2ae3145a98305181d632e9ca39c 374 Gene3D G3DSA:3.40.50.1010 4 145 5.4E-11 T 01-11-2018 CDA09_09915 af55d2ae3145a98305181d632e9ca39c 374 Gene3D G3DSA:1.10.10.1880 210 277 1.1E-16 T 01-11-2018 CDA09_09915 af55d2ae3145a98305181d632e9ca39c 374 Pfam PF12872 OST-HTH/LOTUS domain 210 272 2.3E-10 T 01-11-2018 IPR025605 OST-HTH/LOTUS domain CDA09_09915 af55d2ae3145a98305181d632e9ca39c 374 Pfam PF12872 OST-HTH/LOTUS domain 304 359 0.15 T 01-11-2018 IPR025605 OST-HTH/LOTUS domain CDA09_04885 f87f2466007947a8c835872289fed050 92 SUPERFAMILY SSF47598 8 85 1.02E-18 T 01-11-2018 IPR010985 Ribbon-helix-helix GO:0006355 CDA09_04885 f87f2466007947a8c835872289fed050 92 Pfam PF08681 Protein of unknown function (DUF1778) 11 86 2.3E-24 T 01-11-2018 IPR014795 Vibrio phage ICP1, Orf50 CDA09_04885 f87f2466007947a8c835872289fed050 92 Gene3D G3DSA:1.20.5.780 6 87 2.3E-15 T 01-11-2018 CDA09_19020 05d618274308d43d83a56b5524250a1b 213 Pfam PF03929 PepSY-associated TM region 11 185 9.6E-10 T 01-11-2018 IPR005625 PepSY-associated TM protein CDA09_04540 48a932b9dc52ac1c6eafd11e899153bd 281 TIGRFAM TIGR01183 ntrB: nitrate ABC transporter, permease protein 73 268 6.4E-75 T 01-11-2018 IPR005889 Nitrate transport permease GO:0015112|GO:0015706|GO:0016021 CDA09_04540 48a932b9dc52ac1c6eafd11e899153bd 281 SUPERFAMILY SSF161098 83 266 1.31E-28 T 01-11-2018 IPR035906 MetI-like superfamily CDA09_04540 48a932b9dc52ac1c6eafd11e899153bd 281 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 107 263 1.3E-21 T 01-11-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 CDA09_04540 48a932b9dc52ac1c6eafd11e899153bd 281 Gene3D G3DSA:1.10.3720.10 85 276 4.7E-23 T 01-11-2018 IPR035906 MetI-like superfamily CDA09_16695 93ca023e91c1393c628d4ac3868a4660 224 Hamap MF_00478 Ion-translocating oxidoreductase complex subunit E [rsxE]. 2 211 26.639 T 01-11-2018 IPR010968 Ion-translocating oxidoreductase complex subunit E GO:0016020|GO:0022900 CDA09_16695 93ca023e91c1393c628d4ac3868a4660 224 TIGRFAM TIGR01948 rnfE: electron transport complex, RnfABCDGE type, E subunit 8 208 2.8E-74 T 01-11-2018 IPR010968 Ion-translocating oxidoreductase complex subunit E GO:0016020|GO:0022900 CDA09_16695 93ca023e91c1393c628d4ac3868a4660 224 PIRSF PIRSF006102 1 217 8.2E-69 T 01-11-2018 IPR003667 NqrDE/RnfAE GO:0016020 CDA09_16695 93ca023e91c1393c628d4ac3868a4660 224 Pfam PF02508 Rnf-Nqr subunit, membrane protein 7 200 8.9E-59 T 01-11-2018 IPR003667 NqrDE/RnfAE GO:0016020 CDA09_06350 a39f44b5279d1ef0169a6210da575104 199 TIGRFAM TIGR01755 flav_wrbA: NAD(P)H:quinone oxidoreductase, type IV 3 197 2.6E-94 T 01-11-2018 IPR010089 Flavoprotein WrbA-like GO:0003955|GO:0010181 KEGG: 00130+1.6.5.2|MetaCyc: PWY-7731 CDA09_06350 a39f44b5279d1ef0169a6210da575104 199 SUPERFAMILY SSF52218 1 197 8.65E-61 T 01-11-2018 IPR029039 Flavoprotein-like superfamily CDA09_06350 a39f44b5279d1ef0169a6210da575104 199 Pfam PF03358 NADPH-dependent FMN reductase 3 141 1.5E-11 T 01-11-2018 IPR005025 NADPH-dependent FMN reductase-like GO:0016491 CDA09_06350 a39f44b5279d1ef0169a6210da575104 199 Gene3D G3DSA:3.40.50.360 1 199 2.4E-74 T 01-11-2018 IPR029039 Flavoprotein-like superfamily CDA09_06350 a39f44b5279d1ef0169a6210da575104 199 Hamap MF_01017 NAD(P)H dehydrogenase (quinone). 1 199 47.462 T 01-11-2018 IPR037513 NAD(P)H dehydrogenase (quinone), prokaryotic GO:0003955|GO:0010181 KEGG: 00130+1.6.5.2|MetaCyc: PWY-7731 CDA09_00450 a60d6b81fe47dfe2efa5d85d88028be8 256 Gene3D G3DSA:3.40.50.300 1 255 1.9E-77 T 01-11-2018 CDA09_00450 a60d6b81fe47dfe2efa5d85d88028be8 256 SUPERFAMILY SSF52540 1 254 6.85E-66 T 01-11-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CDA09_00450 a60d6b81fe47dfe2efa5d85d88028be8 256 PIRSF PIRSF009320 86 256 3.4E-9 T 01-11-2018 CDA09_00450 a60d6b81fe47dfe2efa5d85d88028be8 256 PIRSF PIRSF009320 2 61 5.1E-14 T 01-11-2018 CDA09_00450 a60d6b81fe47dfe2efa5d85d88028be8 256 Pfam PF13614 AAA domain 3 178 1.9E-61 T 01-11-2018 IPR025669 AAA domain CDA09_12485 22a921061753775b28d963b200d0c8fa 235 Pfam PF01569 PAP2 superfamily 89 217 4.0E-20 T 01-11-2018 IPR000326 Phosphatidic acid phosphatase type 2/haloperoxidase CDA09_12485 22a921061753775b28d963b200d0c8fa 235 Gene3D G3DSA:1.20.144.10 5 227 4.0E-16 T 01-11-2018 CDA09_12485 22a921061753775b28d963b200d0c8fa 235 SUPERFAMILY SSF48317 16 220 4.97E-20 T 01-11-2018 IPR036938 Phosphatidic acid phosphatase type 2/haloperoxidase superfamily CDA09_21805 d284a4ab5135dd064b01a74b90fe36c5 280 Gene3D G3DSA:3.20.20.140 1 279 3.3E-63 T 01-11-2018 CDA09_21805 d284a4ab5135dd064b01a74b90fe36c5 280 SUPERFAMILY SSF51556 1 280 9.08E-63 T 01-11-2018 IPR032466 Metal-dependent hydrolase CDA09_21805 d284a4ab5135dd064b01a74b90fe36c5 280 Pfam PF04909 Amidohydrolase 3 280 4.5E-42 T 01-11-2018 IPR006680 Amidohydrolase-related GO:0016787 CDA09_01280 250463944c7a754250a8dbf41f7e46c9 149 Pfam PF03892 Nitrate reductase cytochrome c-type subunit (NapB) 24 143 4.0E-47 T 01-11-2018 IPR005591 Nitrate reductase cytochrome c-type subunit NapB CDA09_01280 250463944c7a754250a8dbf41f7e46c9 149 Gene3D G3DSA:1.10.1130.10 63 129 4.6E-29 T 01-11-2018 CDA09_01280 250463944c7a754250a8dbf41f7e46c9 149 PIRSF PIRSF006105 1 149 2.6E-49 T 01-11-2018 IPR005591 Nitrate reductase cytochrome c-type subunit NapB CDA09_01280 250463944c7a754250a8dbf41f7e46c9 149 SUPERFAMILY SSF48695 40 144 3.33E-41 T 01-11-2018 IPR036280 Multiheme cytochrome superfamily CDA09_09645 65be1a55c95930f90c88000a3041ffa9 250 SUPERFAMILY SSF52096 4 250 3.37E-69 T 01-11-2018 IPR029045 ClpP/crotonase-like domain superfamily CDA09_09645 65be1a55c95930f90c88000a3041ffa9 250 Gene3D G3DSA:3.90.226.10 1 250 1.7E-67 T 01-11-2018 CDA09_09645 65be1a55c95930f90c88000a3041ffa9 250 Pfam PF00378 Enoyl-CoA hydratase/isomerase 10 250 2.9E-44 T 01-11-2018 IPR001753 Enoyl-CoA hydratase/isomerase GO:0003824 CDA09_19730 882aed25bcd7739af866e6fa01fb3ce4 309 Pfam PF02653 Branched-chain amino acid transport system / permease component 8 294 1.2E-31 T 01-11-2018 IPR001851 ABC transporter, permease GO:0016020|GO:0022857|GO:0055085 CDA09_09345 875342824d364b277c65a5192e77fd1f 81 Pfam PF13560 Helix-turn-helix domain 11 66 2.5E-11 T 01-11-2018 CDA09_09345 875342824d364b277c65a5192e77fd1f 81 Gene3D G3DSA:1.10.260.40 3 78 2.9E-14 T 01-11-2018 CDA09_09345 875342824d364b277c65a5192e77fd1f 81 SUPERFAMILY SSF47413 7 67 6.48E-15 T 01-11-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 CDA09_09345 875342824d364b277c65a5192e77fd1f 81 SMART SM00530 15 70 1.1E-8 T 01-11-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 CDA09_13115 f1760a51f89cbebe6f3db6c0a7051eeb 325 SUPERFAMILY SSF161098 109 311 7.85E-13 T 01-11-2018 IPR035906 MetI-like superfamily CDA09_13115 f1760a51f89cbebe6f3db6c0a7051eeb 325 Gene3D G3DSA:1.10.3720.10 106 318 2.4E-15 T 01-11-2018 IPR035906 MetI-like superfamily CDA09_13115 f1760a51f89cbebe6f3db6c0a7051eeb 325 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 115 323 7.9E-29 T 01-11-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 CDA09_12990 e6a476ce1813f67c0add2df0303d65ba 254 SMART SM00100 37 156 3.8E-13 T 01-11-2018 IPR000595 Cyclic nucleotide-binding domain CDA09_12990 e6a476ce1813f67c0add2df0303d65ba 254 Pfam PF13545 Crp-like helix-turn-helix domain 177 251 1.6E-10 T 01-11-2018 IPR012318 Crp-type HTH domain GO:0003677|GO:0006355 CDA09_12990 e6a476ce1813f67c0add2df0303d65ba 254 Pfam PF00027 Cyclic nucleotide-binding domain 56 141 3.8E-11 T 01-11-2018 IPR000595 Cyclic nucleotide-binding domain CDA09_12990 e6a476ce1813f67c0add2df0303d65ba 254 SUPERFAMILY SSF51206 32 166 2.09E-19 T 01-11-2018 IPR018490 Cyclic nucleotide-binding-like CDA09_12990 e6a476ce1813f67c0add2df0303d65ba 254 SUPERFAMILY SSF46785 173 252 6.35E-15 T 01-11-2018 IPR036390 Winged helix DNA-binding domain superfamily CDA09_12990 e6a476ce1813f67c0add2df0303d65ba 254 Gene3D G3DSA:2.60.120.10 24 171 2.0E-19 T 01-11-2018 IPR014710 RmlC-like jelly roll fold CDA09_12990 e6a476ce1813f67c0add2df0303d65ba 254 SMART SM00419 196 244 1.9E-6 T 01-11-2018 IPR012318 Crp-type HTH domain GO:0003677|GO:0006355 CDA09_12990 e6a476ce1813f67c0add2df0303d65ba 254 Gene3D G3DSA:1.10.10.10 173 252 5.7E-14 T 01-11-2018 IPR036388 Winged helix-like DNA-binding domain superfamily CDA09_14800 35b7aa1cbcfe3ac5be0abc569cb5598d 415 TIGRFAM TIGR01979 sufS: cysteine desulfurase, SufS family 17 413 2.6E-179 T 01-11-2018 IPR010970 Cysteine desulfurase, SufS GO:0006534|GO:0030170|GO:0031071 KEGG: 00730+2.8.1.7|MetaCyc: PWY-7250 CDA09_14800 35b7aa1cbcfe3ac5be0abc569cb5598d 415 ProSitePatterns PS00595 Aminotransferases class-V pyridoxal-phosphate attachment site. 224 243 - T 01-11-2018 IPR020578 Aminotransferase class-V, pyridoxal-phosphate binding site CDA09_14800 35b7aa1cbcfe3ac5be0abc569cb5598d 415 Gene3D G3DSA:3.90.1150.10 17 405 7.3E-175 T 01-11-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 CDA09_14800 35b7aa1cbcfe3ac5be0abc569cb5598d 415 PIRSF PIRSF005572 30 413 1.6E-47 T 01-11-2018 IPR016454 Cysteine desulfurase KEGG: 00730+2.8.1.7|MetaCyc: PWY-7250 CDA09_14800 35b7aa1cbcfe3ac5be0abc569cb5598d 415 SUPERFAMILY SSF53383 12 409 2.5E-126 T 01-11-2018 IPR015424 Pyridoxal phosphate-dependent transferase CDA09_14800 35b7aa1cbcfe3ac5be0abc569cb5598d 415 Gene3D G3DSA:3.40.640.10 44 303 7.3E-175 T 01-11-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 CDA09_14800 35b7aa1cbcfe3ac5be0abc569cb5598d 415 Pfam PF00266 Aminotransferase class-V 33 401 1.6E-150 T 01-11-2018 IPR000192 Aminotransferase class V domain CDA09_18645 86718e0b781ce2b1ccc6b88720d12e71 195 Gene3D G3DSA:3.40.50.1820 1 195 4.4E-52 T 01-11-2018 IPR029058 Alpha/Beta hydrolase fold CDA09_18645 86718e0b781ce2b1ccc6b88720d12e71 195 Pfam PF05728 Uncharacterised protein family (UPF0227) 1 190 6.5E-54 T 01-11-2018 IPR008886 Uncharacterised protein family UPF0227/Esterase YqiA CDA09_18645 86718e0b781ce2b1ccc6b88720d12e71 195 SUPERFAMILY SSF53474 2 189 1.1E-14 T 01-11-2018 IPR029058 Alpha/Beta hydrolase fold CDA09_02635 f0792feebfdc8f1e7e3a04a925d6cc4c 371 Gene3D G3DSA:1.10.3470.10 48 370 1.8E-93 T 01-11-2018 IPR037294 ABC transporter, BtuC-like CDA09_02635 f0792feebfdc8f1e7e3a04a925d6cc4c 371 SUPERFAMILY SSF81345 44 367 9.55E-76 T 01-11-2018 IPR037294 ABC transporter, BtuC-like CDA09_02635 f0792feebfdc8f1e7e3a04a925d6cc4c 371 Pfam PF01032 FecCD transport family 64 367 3.3E-87 T 01-11-2018 IPR000522 ABC transporter, permease protein, BtuC-like GO:0005215|GO:0016020 CDA09_20785 7a1924cc21cc999f57afc34639d5846b 546 SUPERFAMILY SSF56801 15 541 1.57E-140 T 01-11-2018 CDA09_20785 7a1924cc21cc999f57afc34639d5846b 546 ProSitePatterns PS00455 Putative AMP-binding domain signature. 189 200 - T 01-11-2018 IPR020845 AMP-binding, conserved site CDA09_20785 7a1924cc21cc999f57afc34639d5846b 546 Pfam PF13193 AMP-binding enzyme C-terminal domain 455 529 7.1E-20 T 01-11-2018 IPR025110 AMP-binding enzyme, C-terminal domain CDA09_20785 7a1924cc21cc999f57afc34639d5846b 546 Gene3D G3DSA:3.40.50.12780 11 441 1.6E-105 T 01-11-2018 CDA09_20785 7a1924cc21cc999f57afc34639d5846b 546 Gene3D G3DSA:3.30.300.310 442 544 4.6E-35 T 01-11-2018 CDA09_20785 7a1924cc21cc999f57afc34639d5846b 546 Pfam PF00501 AMP-binding enzyme 26 446 6.2E-95 T 01-11-2018 IPR000873 AMP-dependent synthetase/ligase GO:0003824 CDA09_07780 b86ec3686f9d92cdec5f06fd04f24317 765 Pfam PF00593 TonB dependent receptor 271 760 1.1E-50 T 01-11-2018 IPR000531 TonB-dependent receptor-like, beta-barrel CDA09_07780 b86ec3686f9d92cdec5f06fd04f24317 765 Gene3D G3DSA:2.40.170.20 186 762 2.9E-84 T 01-11-2018 IPR036942 TonB-dependent receptor-like, beta-barrel domain superfamily CDA09_07780 b86ec3686f9d92cdec5f06fd04f24317 765 SUPERFAMILY SSF56935 25 762 1.2E-105 T 01-11-2018 CDA09_07780 b86ec3686f9d92cdec5f06fd04f24317 765 Pfam PF07715 TonB-dependent Receptor Plug Domain 52 165 1.3E-13 T 01-11-2018 IPR012910 TonB-dependent receptor, plug domain CDA09_07780 b86ec3686f9d92cdec5f06fd04f24317 765 Gene3D G3DSA:2.170.130.10 53 173 3.1E-11 T 01-11-2018 IPR037066 TonB-dependent receptor, plug domain superfamily CDA09_10045 58d6f2e65a5dbd420a5429920f7b61a9 164 Pfam PF00111 2Fe-2S iron-sulfur cluster binding domain 10 57 2.7E-7 T 01-11-2018 IPR001041 2Fe-2S ferredoxin-type iron-sulfur binding domain GO:0009055|GO:0051536 CDA09_10045 58d6f2e65a5dbd420a5429920f7b61a9 164 SUPERFAMILY SSF54292 6 82 5.51E-26 T 01-11-2018 IPR036010 2Fe-2S ferredoxin-like superfamily GO:0009055|GO:0051536 CDA09_10045 58d6f2e65a5dbd420a5429920f7b61a9 164 SUPERFAMILY SSF47741 90 159 3.27E-34 T 01-11-2018 IPR036884 [2Fe-2S]-binding domain superfamily CDA09_10045 58d6f2e65a5dbd420a5429920f7b61a9 164 Pfam PF01799 [2Fe-2S] binding domain 77 151 4.0E-32 T 01-11-2018 IPR002888 [2Fe-2S]-binding GO:0016491|GO:0046872|GO:0055114 CDA09_10045 58d6f2e65a5dbd420a5429920f7b61a9 164 ProSitePatterns PS00197 2Fe-2S ferredoxin-type iron-sulfur binding region signature. 43 51 - T 01-11-2018 IPR006058 2Fe-2S ferredoxin, iron-sulphur binding site GO:0051537 CDA09_10045 58d6f2e65a5dbd420a5429920f7b61a9 164 Gene3D G3DSA:3.30.365.10 2 163 1.6E-67 T 01-11-2018 CDA09_18960 45f161ec9d98ff8ac07e2bcdbb384ac9 138 Pfam PF02472 Biopolymer transport protein ExbD/TolR 15 135 7.4E-31 T 01-11-2018 IPR003400 Biopolymer transport protein ExbD/TolR GO:0022857|GO:0055085 CDA09_18960 45f161ec9d98ff8ac07e2bcdbb384ac9 138 Gene3D G3DSA:3.30.420.270 63 132 6.6E-14 T 01-11-2018 CDA09_15335 80e2055f4f520cc653695a2ad08811e6 957 Hamap MF_00970 Ribonuclease E [rne]. 1 942 34.616 T 01-11-2018 IPR028878 Ribonuclease E GO:0006396|GO:0008995 CDA09_15335 80e2055f4f520cc653695a2ad08811e6 957 Pfam PF00575 S1 RNA binding domain 36 117 4.3E-10 T 01-11-2018 IPR003029 S1 domain GO:0003676 CDA09_15335 80e2055f4f520cc653695a2ad08811e6 957 Gene3D G3DSA:3.40.1260.20 399 505 1.3E-37 T 01-11-2018 CDA09_15335 80e2055f4f520cc653695a2ad08811e6 957 SUPERFAMILY SSF50249 40 124 1.18E-17 T 01-11-2018 IPR012340 Nucleic acid-binding, OB-fold CDA09_15335 80e2055f4f520cc653695a2ad08811e6 957 SMART SM00316 37 118 1.5E-9 T 01-11-2018 IPR022967 RNA-binding domain, S1 CDA09_15335 80e2055f4f520cc653695a2ad08811e6 957 Pfam PF10150 Ribonuclease E/G family 120 389 1.7E-94 T 01-11-2018 IPR019307 RNA-binding protein AU-1/Ribonuclease E/G GO:0003723 CDA09_15335 80e2055f4f520cc653695a2ad08811e6 957 Gene3D G3DSA:2.40.50.140 31 124 3.4E-31 T 01-11-2018 CDA09_15335 80e2055f4f520cc653695a2ad08811e6 957 TIGRFAM TIGR00757 RNaseEG: ribonuclease, Rne/Rng family 13 423 1.2E-160 T 01-11-2018 IPR004659 Ribonuclease E/G GO:0003723|GO:0004540|GO:0006396 CDA09_08435 dc8db4e8391c158e33aff5276ba9a2d0 285 SUPERFAMILY SSF54427 154 284 1.18E-11 T 01-11-2018 IPR032710 NTF2-like domain superfamily CDA09_08435 dc8db4e8391c158e33aff5276ba9a2d0 285 SMART SM00978 153 283 2.7E-43 T 01-11-2018 IPR007379 Tim44-like domain CDA09_08435 dc8db4e8391c158e33aff5276ba9a2d0 285 Pfam PF04280 Tim44-like domain 154 283 2.0E-17 T 01-11-2018 IPR007379 Tim44-like domain CDA09_14300 7d090d462cc6dd61f69f38e508b71918 142 Gene3D G3DSA:3.30.300.70 1 71 1.8E-12 T 01-11-2018 IPR035956 RimP, N-terminal domain superfamily CDA09_14300 7d090d462cc6dd61f69f38e508b71918 142 SUPERFAMILY SSF75420 3 74 1.96E-16 T 01-11-2018 IPR035956 RimP, N-terminal domain superfamily CDA09_14300 7d090d462cc6dd61f69f38e508b71918 142 Pfam PF02576 RimP N-terminal domain 6 74 5.1E-19 T 01-11-2018 IPR028989 Ribosome maturation factor RimP, N-terminal CDA09_14300 7d090d462cc6dd61f69f38e508b71918 142 Hamap MF_01077 Ribosome maturation factor RimP [rimP]. 1 142 22.97 T 01-11-2018 IPR003728 Ribosome maturation factor RimP GO:0042274 CDA09_14300 7d090d462cc6dd61f69f38e508b71918 142 SUPERFAMILY SSF74942 75 142 4.71E-19 T 01-11-2018 IPR036847 Ribosome maturation factor RimP, C-terminal domain superfamily CDA09_14300 7d090d462cc6dd61f69f38e508b71918 142 Gene3D G3DSA:2.30.30.180 78 139 4.8E-5 T 01-11-2018 CDA09_14300 7d090d462cc6dd61f69f38e508b71918 142 Pfam PF17384 RimP C-terminal SH3 domain 77 142 1.9E-16 T 01-11-2018 IPR028998 Ribosome maturation factor RimP, C-terminal CDA09_07815 1f04664792249ae242a8182afb7c9019 201 Pfam PF00043 Glutathione S-transferase, C-terminal domain 104 189 2.6E-11 T 01-11-2018 IPR004046 Glutathione S-transferase, C-terminal CDA09_07815 1f04664792249ae242a8182afb7c9019 201 Pfam PF02798 Glutathione S-transferase, N-terminal domain 2 74 3.7E-12 T 01-11-2018 IPR004045 Glutathione S-transferase, N-terminal GO:0005515 CDA09_07815 1f04664792249ae242a8182afb7c9019 201 Gene3D G3DSA:3.40.30.10 3 192 5.8E-71 T 01-11-2018 CDA09_07815 1f04664792249ae242a8182afb7c9019 201 SUPERFAMILY SSF47616 82 198 4.18E-30 T 01-11-2018 IPR036282 Glutathione S-transferase, C-terminal domain superfamily CDA09_07815 1f04664792249ae242a8182afb7c9019 201 SUPERFAMILY SSF52833 1 79 1.24E-17 T 01-11-2018 IPR036249 Thioredoxin-like superfamily CDA09_07815 1f04664792249ae242a8182afb7c9019 201 Gene3D G3DSA:1.20.1050.10 82 188 5.8E-71 T 01-11-2018 CDA09_18475 6066c1c8e8d460b9ccdb48e4b4a8765d 62 SUPERFAMILY SSF54786 13 59 1.73E-7 T 01-11-2018 CDA09_20630 de8907930c883ef3f8d49f4341a4432e 424 Pfam PF03060 Nitronate monooxygenase 164 306 2.2E-20 T 01-11-2018 IPR004136 Nitronate monooxygenase GO:0018580|GO:0055114 KEGG: 00910+1.13.12.16|MetaCyc: PWY-723 CDA09_20630 de8907930c883ef3f8d49f4341a4432e 424 SUPERFAMILY SSF51412 4 317 1.34E-30 T 01-11-2018 CDA09_21620 547db3d51b9b17b47901d5bda96310b1 154 Pfam PF11663 Toxin with endonuclease activity, of toxin-antitoxin system 8 144 1.1E-55 T 01-11-2018 IPR021679 Toxin endonuclease, YhaV GO:0004540|GO:0110001 CDA09_19665 69fd2dfabe66eec5a3b5b1bfe7afd8de 418 SUPERFAMILY SSF102114 164 412 1.96E-13 T 01-11-2018 CDA09_19665 69fd2dfabe66eec5a3b5b1bfe7afd8de 418 Gene3D G3DSA:3.20.20.70 148 387 1.2E-10 T 01-11-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 CDA09_22330 6e955c586ad32a92e27067b3fe1b09df 183 Pfam PF13994 PgaD-like protein 19 155 6.7E-22 T 01-11-2018 IPR023829 Poly-beta-1,6-N-acetyl-D-glucosamine biosynthesis protein PgaD GO:0043709 CDA09_22330 6e955c586ad32a92e27067b3fe1b09df 183 TIGRFAM TIGR03940 PGA_PgaD: poly-beta-1,6-N-acetyl-D-glucosamine biosynthesis protein PgaD 18 159 1.8E-24 T 01-11-2018 IPR023829 Poly-beta-1,6-N-acetyl-D-glucosamine biosynthesis protein PgaD GO:0043709 CDA09_01795 abfda0690b64f8b514c4bf37bb316ecc 149 Hamap MF_00073 Transcription antitermination protein NusB [nusB]. 5 136 20.847 T 01-11-2018 IPR011605 NusB antitermination factor GO:0006353 CDA09_01795 abfda0690b64f8b514c4bf37bb316ecc 149 Pfam PF01029 NusB family 8 132 1.3E-29 T 01-11-2018 IPR006027 NusB/RsmB/TIM44 GO:0003723|GO:0006355 CDA09_01795 abfda0690b64f8b514c4bf37bb316ecc 149 Gene3D G3DSA:1.10.940.10 2 140 2.2E-41 T 01-11-2018 IPR035926 NusB-like superfamily CDA09_01795 abfda0690b64f8b514c4bf37bb316ecc 149 SUPERFAMILY SSF48013 5 136 2.62E-40 T 01-11-2018 IPR035926 NusB-like superfamily CDA09_01795 abfda0690b64f8b514c4bf37bb316ecc 149 TIGRFAM TIGR01951 nusB: transcription antitermination factor NusB 7 134 2.1E-38 T 01-11-2018 IPR011605 NusB antitermination factor GO:0006353 CDA09_12385 67ee38e07f8d133ef14ad5921e19bb4f 118 Pfam PF12643 MazG-like family 38 118 1.0E-13 T 01-11-2018 IPR025984 dCTP pyrophosphatase 1 GO:0009143|GO:0047429 KEGG: 00240+3.6.1.12|Reactome: R-HSA-499943 CDA09_12385 67ee38e07f8d133ef14ad5921e19bb4f 118 PIRSF PIRSF029826 1 118 5.1E-45 T 01-11-2018 IPR025984 dCTP pyrophosphatase 1 GO:0009143|GO:0047429 KEGG: 00240+3.6.1.12|Reactome: R-HSA-499943 CDA09_12385 67ee38e07f8d133ef14ad5921e19bb4f 118 SUPERFAMILY SSF101386 6 117 1.16E-37 T 01-11-2018 CDA09_12385 67ee38e07f8d133ef14ad5921e19bb4f 118 Gene3D G3DSA:1.10.287.1080 1 110 2.6E-37 T 01-11-2018 CDA09_05810 bcfb0e770704b2e37b0ad1e1d44f3f19 598 Pfam PF12228 Protein of unknown function (DUF3604) 29 596 5.6E-213 T 01-11-2018 IPR022028 Protein of unknown function DUF3604 CDA09_05810 bcfb0e770704b2e37b0ad1e1d44f3f19 598 SUPERFAMILY SSF89550 34 341 1.51E-5 T 01-11-2018 IPR016195 Polymerase/histidinol phosphatase-like GO:0003824 Reactome: R-HSA-6784531|Reactome: R-HSA-6791226 CDA09_15095 0d80be60800badc0790863593be18303 314 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 18 29 1.3E-9 T 01-11-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 CDA09_15095 0d80be60800badc0790863593be18303 314 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 29 39 1.3E-9 T 01-11-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 CDA09_15095 0d80be60800badc0790863593be18303 314 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 39 50 1.3E-9 T 01-11-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 CDA09_15095 0d80be60800badc0790863593be18303 314 Pfam PF03466 LysR substrate binding domain 87 290 2.7E-37 T 01-11-2018 IPR005119 LysR, substrate-binding CDA09_15095 0d80be60800badc0790863593be18303 314 Gene3D G3DSA:3.40.190.10 162 268 1.5E-33 T 01-11-2018 CDA09_15095 0d80be60800badc0790863593be18303 314 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 3 62 3.2E-21 T 01-11-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 CDA09_15095 0d80be60800badc0790863593be18303 314 SUPERFAMILY SSF53850 91 291 4.96E-34 T 01-11-2018 CDA09_15095 0d80be60800badc0790863593be18303 314 Gene3D G3DSA:3.40.190.10 91 287 1.5E-33 T 01-11-2018 CDA09_15095 0d80be60800badc0790863593be18303 314 SUPERFAMILY SSF46785 1 86 1.27E-23 T 01-11-2018 IPR036390 Winged helix DNA-binding domain superfamily CDA09_15095 0d80be60800badc0790863593be18303 314 Gene3D G3DSA:1.10.10.10 1 90 3.5E-29 T 01-11-2018 IPR036388 Winged helix-like DNA-binding domain superfamily CDA09_10210 db7fca36cb463062639d20ed51158492 104 Pfam PF02406 MmoB/DmpM family 13 99 9.3E-29 T 01-11-2018 IPR003454 Monooxygenase component MmoB/DmpM GO:0004497|GO:0006725 CDA09_10210 db7fca36cb463062639d20ed51158492 104 Gene3D G3DSA:3.90.56.10 3 104 2.3E-39 T 01-11-2018 IPR036889 Monooxygenase component MmoB/DmpM superfamily GO:0004497|GO:0006725 CDA09_10210 db7fca36cb463062639d20ed51158492 104 SUPERFAMILY SSF56029 7 100 1.7E-31 T 01-11-2018 IPR036889 Monooxygenase component MmoB/DmpM superfamily GO:0004497|GO:0006725 CDA09_10210 db7fca36cb463062639d20ed51158492 104 ProDom PD004249 MONOOXYGENASE COMPONENT HYDROXYLASE MMOB/DMPM PHENOL SUBUNIT 3D-STRUCTURE HYDROCARBONS IRON PHENOLHYDROXYLASE 19 104 4.0E-38 T 01-11-2018 IPR003454 Monooxygenase component MmoB/DmpM GO:0004497|GO:0006725 CDA09_00445 6df855877ad9bd25cc6338ce44a66518 211 PIRSF PIRSF003078 1 211 1.7E-50 T 01-11-2018 IPR003682 rRNA small subunit methyltransferase G GO:0005737|GO:0006364|GO:0008649 CDA09_00445 6df855877ad9bd25cc6338ce44a66518 211 TIGRFAM TIGR00138 rsmG_gidB: 16S rRNA (guanine(527)-N(7))-methyltransferase RsmG 26 210 5.2E-49 T 01-11-2018 IPR003682 rRNA small subunit methyltransferase G GO:0005737|GO:0006364|GO:0008649 CDA09_00445 6df855877ad9bd25cc6338ce44a66518 211 Gene3D G3DSA:3.40.50.150 2 211 2.4E-64 T 01-11-2018 CDA09_00445 6df855877ad9bd25cc6338ce44a66518 211 SUPERFAMILY SSF53335 8 210 7.78E-36 T 01-11-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase CDA09_00445 6df855877ad9bd25cc6338ce44a66518 211 Pfam PF02527 rRNA small subunit methyltransferase G 23 205 1.6E-50 T 01-11-2018 IPR003682 rRNA small subunit methyltransferase G GO:0005737|GO:0006364|GO:0008649 CDA09_00445 6df855877ad9bd25cc6338ce44a66518 211 Hamap MF_00074 Ribosomal RNA small subunit methyltransferase G [rsmG]. 14 207 25.699 T 01-11-2018 IPR003682 rRNA small subunit methyltransferase G GO:0005737|GO:0006364|GO:0008649 CDA09_04235 9d823aa8e9599b7098aad48927a86613 264 TIGRFAM TIGR00056 TIGR00056: ABC transport permease subunit 9 262 4.4E-84 T 01-11-2018 IPR003453 ABC transport permease subunit MlaE, Proteobacteria CDA09_04235 9d823aa8e9599b7098aad48927a86613 264 Pfam PF02405 Permease MlaE 47 257 1.6E-72 T 01-11-2018 IPR030802 ABC transporter permease MalE GO:0043190 CDA09_09580 ab912e29e1ad07c9748c08bd8fdce9e3 212 ProSitePatterns PS01081 TetR-type HTH domain signature. 41 72 - T 01-11-2018 IPR023772 DNA-binding HTH domain, TetR-type, conserved site CDA09_09580 ab912e29e1ad07c9748c08bd8fdce9e3 212 SUPERFAMILY SSF46689 22 91 4.16E-20 T 01-11-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 CDA09_09580 ab912e29e1ad07c9748c08bd8fdce9e3 212 Pfam PF00440 Bacterial regulatory proteins, tetR family 29 75 4.8E-18 T 01-11-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 CDA09_09580 ab912e29e1ad07c9748c08bd8fdce9e3 212 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 29 42 1.8E-10 T 01-11-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 CDA09_09580 ab912e29e1ad07c9748c08bd8fdce9e3 212 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 50 73 1.8E-10 T 01-11-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 CDA09_09580 ab912e29e1ad07c9748c08bd8fdce9e3 212 Gene3D G3DSA:1.10.357.10 20 211 5.7E-31 T 01-11-2018 CDA09_15445 3ad06e726696e8405bb4240be72fe87a 257 Gene3D G3DSA:3.60.60.10 9 231 1.7E-6 T 01-11-2018 CDA09_15445 3ad06e726696e8405bb4240be72fe87a 257 Pfam PF05742 Transport and Golgi organisation 2 1 237 5.4E-64 T 01-11-2018 IPR008551 Transport and Golgi organisation protein 2 CDA09_18940 22deda0d7607ef5e7ed03bbe4ef08a72 78 Pfam PF04324 BFD-like [2Fe-2S] binding domain 2 49 1.8E-8 T 01-11-2018 IPR007419 BFD-like [2Fe-2S]-binding domain CDA09_18940 22deda0d7607ef5e7ed03bbe4ef08a72 78 Gene3D G3DSA:1.10.10.1100 1 57 4.2E-20 T 01-11-2018 CDA09_05870 77eefb5a23ce20523c3210a25f9c3584 501 Gene3D G3DSA:2.40.160.10 111 501 2.9E-12 T 01-11-2018 IPR023614 Porin domain superfamily CDA09_05870 77eefb5a23ce20523c3210a25f9c3584 501 SUPERFAMILY SSF56935 111 487 1.19E-5 T 01-11-2018 CDA09_08895 1f021e2a50c77a372a9b3922d1b29e36 460 SUPERFAMILY SSF81442 3 451 7.06E-86 T 01-11-2018 IPR036927 Cytochrome c oxidase-like, subunit I superfamily GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 CDA09_08895 1f021e2a50c77a372a9b3922d1b29e36 460 Gene3D G3DSA:1.20.210.10 2 456 5.9E-124 T 01-11-2018 IPR036927 Cytochrome c oxidase-like, subunit I superfamily GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 CDA09_08895 1f021e2a50c77a372a9b3922d1b29e36 460 ProSitePatterns PS00077 Heme-copper oxidase catalytic subunit, copper B binding region signature. 196 252 - T 01-11-2018 IPR023615 Cytochrome c oxidase, subunit I, copper-binding site GO:0004129|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 CDA09_08895 1f021e2a50c77a372a9b3922d1b29e36 460 Pfam PF00115 Cytochrome C and Quinol oxidase polypeptide I 8 436 2.6E-80 T 01-11-2018 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 CDA09_01835 5f65d194c2402cf5576e7245d223ddee 127 SUPERFAMILY SSF52172 3 124 1.08E-36 T 01-11-2018 IPR011006 CheY-like superfamily CDA09_01835 5f65d194c2402cf5576e7245d223ddee 127 Gene3D G3DSA:3.40.50.12740 5 127 3.5E-40 T 01-11-2018 CDA09_01835 5f65d194c2402cf5576e7245d223ddee 127 Pfam PF00072 Response regulator receiver domain 7 119 1.1E-26 T 01-11-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 CDA09_01835 5f65d194c2402cf5576e7245d223ddee 127 SMART SM00448 5 119 1.7E-40 T 01-11-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 CDA09_12140 ccf12d127db9fcd263d61fa56315e859 94 Gene3D G3DSA:3.30.70.20 15 93 3.3E-7 T 01-11-2018 CDA09_12140 ccf12d127db9fcd263d61fa56315e859 94 SUPERFAMILY SSF54862 7 91 8.82E-9 T 01-11-2018 CDA09_21190 6cf01e39908c478573f7cac0d4dd2475 310 Pfam PF02653 Branched-chain amino acid transport system / permease component 8 294 7.7E-47 T 01-11-2018 IPR001851 ABC transporter, permease GO:0016020|GO:0022857|GO:0055085 CDA09_14590 48b86d415582ecfebcf8e8e39ca5c41b 370 Gene3D G3DSA:3.30.1490.20 15 202 1.7E-67 T 01-11-2018 IPR013815 ATP-grasp fold, subdomain 1 GO:0005524 CDA09_14590 48b86d415582ecfebcf8e8e39ca5c41b 370 Pfam PF01326 Pyruvate phosphate dikinase, PEP/pyruvate binding domain 30 349 8.6E-113 T 01-11-2018 IPR002192 Pyruvate phosphate dikinase, PEP/pyruvate-binding GO:0005524|GO:0016301|GO:0016310 CDA09_14590 48b86d415582ecfebcf8e8e39ca5c41b 370 Gene3D G3DSA:3.30.470.20 203 356 5.7E-48 T 01-11-2018 CDA09_14590 48b86d415582ecfebcf8e8e39ca5c41b 370 SUPERFAMILY SSF56059 16 343 2.59E-99 T 01-11-2018 CDA09_13435 4c97025b53ffc691261fead12f085959 318 Gene3D G3DSA:3.30.1330.40 191 312 1.1E-19 T 01-11-2018 IPR035959 RutC-like superfamily Reactome: R-HSA-8849175 CDA09_13435 4c97025b53ffc691261fead12f085959 318 SUPERFAMILY SSF55298 183 309 1.53E-14 T 01-11-2018 IPR035959 RutC-like superfamily Reactome: R-HSA-8849175 CDA09_00380 2c44c0389e283ef1457bdf0f3d591de3 325 ProSitePatterns PS00678 Trp-Asp (WD) repeats signature. 110 124 - T 01-11-2018 IPR019775 WD40 repeat, conserved site CDA09_00380 2c44c0389e283ef1457bdf0f3d591de3 325 ProSitePatterns PS00678 Trp-Asp (WD) repeats signature. 194 208 - T 01-11-2018 IPR019775 WD40 repeat, conserved site CDA09_00380 2c44c0389e283ef1457bdf0f3d591de3 325 SUPERFAMILY SSF50978 7 288 4.03E-83 T 01-11-2018 IPR036322 WD40-repeat-containing domain superfamily GO:0005515 CDA09_00380 2c44c0389e283ef1457bdf0f3d591de3 325 SMART SM00320 210 249 7.8E-12 T 01-11-2018 IPR001680 WD40 repeat GO:0005515 CDA09_00380 2c44c0389e283ef1457bdf0f3d591de3 325 SMART SM00320 126 165 2.2 T 01-11-2018 IPR001680 WD40 repeat GO:0005515 CDA09_00380 2c44c0389e283ef1457bdf0f3d591de3 325 SMART SM00320 3 39 1.3E-5 T 01-11-2018 IPR001680 WD40 repeat GO:0005515 CDA09_00380 2c44c0389e283ef1457bdf0f3d591de3 325 SMART SM00320 252 291 1.2E-4 T 01-11-2018 IPR001680 WD40 repeat GO:0005515 CDA09_00380 2c44c0389e283ef1457bdf0f3d591de3 325 SMART SM00320 84 123 1.3E-6 T 01-11-2018 IPR001680 WD40 repeat GO:0005515 CDA09_00380 2c44c0389e283ef1457bdf0f3d591de3 325 SMART SM00320 168 207 1.6E-4 T 01-11-2018 IPR001680 WD40 repeat GO:0005515 CDA09_00380 2c44c0389e283ef1457bdf0f3d591de3 325 SMART SM00320 42 81 8.4E-10 T 01-11-2018 IPR001680 WD40 repeat GO:0005515 CDA09_00380 2c44c0389e283ef1457bdf0f3d591de3 325 ProSitePatterns PS00678 Trp-Asp (WD) repeats signature. 68 82 - T 01-11-2018 IPR019775 WD40 repeat, conserved site CDA09_00380 2c44c0389e283ef1457bdf0f3d591de3 325 ProSitePatterns PS00678 Trp-Asp (WD) repeats signature. 236 250 - T 01-11-2018 IPR019775 WD40 repeat, conserved site CDA09_00380 2c44c0389e283ef1457bdf0f3d591de3 325 PRINTS PR00320 G protein beta WD-40 repeat signature 236 250 1.8E-6 T 01-11-2018 IPR020472 G-protein beta WD-40 repeat CDA09_00380 2c44c0389e283ef1457bdf0f3d591de3 325 PRINTS PR00320 G protein beta WD-40 repeat signature 26 40 1.8E-6 T 01-11-2018 IPR020472 G-protein beta WD-40 repeat CDA09_00380 2c44c0389e283ef1457bdf0f3d591de3 325 PRINTS PR00320 G protein beta WD-40 repeat signature 68 82 1.8E-6 T 01-11-2018 IPR020472 G-protein beta WD-40 repeat CDA09_00380 2c44c0389e283ef1457bdf0f3d591de3 325 Gene3D G3DSA:2.130.10.10 89 313 1.0E-63 T 01-11-2018 IPR015943 WD40/YVTN repeat-like-containing domain superfamily GO:0005515 CDA09_00380 2c44c0389e283ef1457bdf0f3d591de3 325 Gene3D G3DSA:2.130.10.10 1 88 1.2E-26 T 01-11-2018 IPR015943 WD40/YVTN repeat-like-containing domain superfamily GO:0005515 CDA09_00380 2c44c0389e283ef1457bdf0f3d591de3 325 Pfam PF00400 WD domain, G-beta repeat 212 249 1.4E-8 T 01-11-2018 IPR001680 WD40 repeat GO:0005515 CDA09_00380 2c44c0389e283ef1457bdf0f3d591de3 325 Pfam PF00400 WD domain, G-beta repeat 182 207 0.0013 T 01-11-2018 IPR001680 WD40 repeat GO:0005515 CDA09_00380 2c44c0389e283ef1457bdf0f3d591de3 325 Pfam PF00400 WD domain, G-beta repeat 265 288 0.0023 T 01-11-2018 IPR001680 WD40 repeat GO:0005515 CDA09_00380 2c44c0389e283ef1457bdf0f3d591de3 325 Pfam PF00400 WD domain, G-beta repeat 9 39 7.6E-5 T 01-11-2018 IPR001680 WD40 repeat GO:0005515 CDA09_00380 2c44c0389e283ef1457bdf0f3d591de3 325 Pfam PF00400 WD domain, G-beta repeat 91 123 3.3E-5 T 01-11-2018 IPR001680 WD40 repeat GO:0005515 CDA09_00380 2c44c0389e283ef1457bdf0f3d591de3 325 Pfam PF00400 WD domain, G-beta repeat 44 81 1.4E-5 T 01-11-2018 IPR001680 WD40 repeat GO:0005515 CDA09_10155 fe114243208964a17277d368ea18cd08 121 SUPERFAMILY SSF52172 2 120 3.27E-29 T 01-11-2018 IPR011006 CheY-like superfamily CDA09_10155 fe114243208964a17277d368ea18cd08 121 SMART SM00448 2 116 2.5E-29 T 01-11-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 CDA09_10155 fe114243208964a17277d368ea18cd08 121 Gene3D G3DSA:3.40.50.2300 2 121 9.1E-30 T 01-11-2018 CDA09_10155 fe114243208964a17277d368ea18cd08 121 Pfam PF00072 Response regulator receiver domain 4 115 1.1E-22 T 01-11-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 CDA09_12885 b086cbb844bd902c96c632fa6fd99125 140 Gene3D G3DSA:3.10.180.10 2 140 1.7E-53 T 01-11-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase CDA09_12885 b086cbb844bd902c96c632fa6fd99125 140 Pfam PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily 7 130 9.3E-14 T 01-11-2018 IPR004360 Glyoxalase/fosfomycin resistance/dioxygenase domain CDA09_12885 b086cbb844bd902c96c632fa6fd99125 140 SUPERFAMILY SSF54593 4 136 2.15E-29 T 01-11-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase CDA09_13565 cf7098202dccb790f69e722f212bc9ba 278 SUPERFAMILY SSF52096 20 278 1.22E-85 T 01-11-2018 IPR029045 ClpP/crotonase-like domain superfamily CDA09_13565 cf7098202dccb790f69e722f212bc9ba 278 ProSitePatterns PS00166 Enoyl-CoA hydratase/isomerase signature. 118 138 - T 01-11-2018 IPR018376 Enoyl-CoA hydratase/isomerase, conserved site GO:0003824 CDA09_13565 cf7098202dccb790f69e722f212bc9ba 278 Pfam PF00378 Enoyl-CoA hydratase/isomerase 26 277 1.2E-61 T 01-11-2018 IPR001753 Enoyl-CoA hydratase/isomerase GO:0003824 CDA09_13565 cf7098202dccb790f69e722f212bc9ba 278 Gene3D G3DSA:3.90.226.10 3 219 9.7E-74 T 01-11-2018 CDA09_13565 cf7098202dccb790f69e722f212bc9ba 278 Gene3D G3DSA:1.10.12.10 221 278 8.4E-16 T 01-11-2018 IPR014748 Enoyl-CoA hydratase, C-terminal CDA09_02360 edac8be75d375cd53575db5c77e2766b 272 SUPERFAMILY SSF103481 182 271 4.58E-13 T 01-11-2018 CDA09_02360 edac8be75d375cd53575db5c77e2766b 272 Pfam PF00892 EamA-like transporter family 11 119 1.2E-11 T 01-11-2018 IPR000620 EamA domain GO:0016020|GO:0016021 CDA09_02360 edac8be75d375cd53575db5c77e2766b 272 Pfam PF00892 EamA-like transporter family 138 270 1.8E-15 T 01-11-2018 IPR000620 EamA domain GO:0016020|GO:0016021 CDA09_02360 edac8be75d375cd53575db5c77e2766b 272 SUPERFAMILY SSF103481 38 123 1.31E-11 T 01-11-2018 CDA09_15295 dc3cbdb1e8dd26585e831aa7387ff170 321 SUPERFAMILY SSF53901 4 320 8.38E-72 T 01-11-2018 IPR016039 Thiolase-like GO:0003824 CDA09_15295 dc3cbdb1e8dd26585e831aa7387ff170 321 Pfam PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III 109 186 5.6E-34 T 01-11-2018 IPR013751 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III GO:0004315|GO:0006633 KEGG: 00061+2.3.1.180|MetaCyc: PWY-4381 CDA09_15295 dc3cbdb1e8dd26585e831aa7387ff170 321 Gene3D G3DSA:3.40.47.10 1 321 2.4E-132 T 01-11-2018 IPR016039 Thiolase-like GO:0003824 CDA09_15295 dc3cbdb1e8dd26585e831aa7387ff170 321 Pfam PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal 232 320 1.1E-35 T 01-11-2018 IPR013747 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III, C-terminal KEGG: 00061+2.3.1.180|MetaCyc: PWY-4381 CDA09_15295 dc3cbdb1e8dd26585e831aa7387ff170 321 Hamap MF_01815 3-oxoacyl-[acyl-carrier-protein] synthase 3 [fabH]. 2 321 70.207 T 01-11-2018 IPR004655 3-oxoacyl-[acyl-carrier-protein] synthase 3 GO:0004315|GO:0006633 KEGG: 00061+2.3.1.180|MetaCyc: PWY-4381 CDA09_15295 dc3cbdb1e8dd26585e831aa7387ff170 321 TIGRFAM TIGR00747 fabH: 3-oxoacyl-[acyl-carrier-protein] synthase III 3 321 3.0E-123 T 01-11-2018 IPR004655 3-oxoacyl-[acyl-carrier-protein] synthase 3 GO:0004315|GO:0006633 KEGG: 00061+2.3.1.180|MetaCyc: PWY-4381 CDA09_06435 1070f9539073c37657cc30e9a25c23bf 472 SUPERFAMILY SSF52935 320 470 6.41E-37 T 01-11-2018 IPR036918 Pyruvate kinase, C-terminal domain superfamily KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 CDA09_06435 1070f9539073c37657cc30e9a25c23bf 472 Gene3D G3DSA:3.40.1380.20 333 465 1.1E-159 T 01-11-2018 IPR036918 Pyruvate kinase, C-terminal domain superfamily KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 CDA09_06435 1070f9539073c37657cc30e9a25c23bf 472 Pfam PF02887 Pyruvate kinase, alpha/beta domain 355 468 9.8E-26 T 01-11-2018 IPR015795 Pyruvate kinase, C-terminal KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 CDA09_06435 1070f9539073c37657cc30e9a25c23bf 472 Pfam PF00224 Pyruvate kinase, barrel domain 5 334 6.2E-110 T 01-11-2018 IPR015793 Pyruvate kinase, barrel GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 CDA09_06435 1070f9539073c37657cc30e9a25c23bf 472 PRINTS PR01050 Pyruvate kinase family signature 291 309 4.1E-65 T 01-11-2018 IPR001697 Pyruvate kinase GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 CDA09_06435 1070f9539073c37657cc30e9a25c23bf 472 PRINTS PR01050 Pyruvate kinase family signature 187 201 4.1E-65 T 01-11-2018 IPR001697 Pyruvate kinase GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 CDA09_06435 1070f9539073c37657cc30e9a25c23bf 472 PRINTS PR01050 Pyruvate kinase family signature 62 78 4.1E-65 T 01-11-2018 IPR001697 Pyruvate kinase GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 CDA09_06435 1070f9539073c37657cc30e9a25c23bf 472 PRINTS PR01050 Pyruvate kinase family signature 241 265 4.1E-65 T 01-11-2018 IPR001697 Pyruvate kinase GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 CDA09_06435 1070f9539073c37657cc30e9a25c23bf 472 PRINTS PR01050 Pyruvate kinase family signature 214 240 4.1E-65 T 01-11-2018 IPR001697 Pyruvate kinase GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 CDA09_06435 1070f9539073c37657cc30e9a25c23bf 472 PRINTS PR01050 Pyruvate kinase family signature 310 326 4.1E-65 T 01-11-2018 IPR001697 Pyruvate kinase GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 CDA09_06435 1070f9539073c37657cc30e9a25c23bf 472 PRINTS PR01050 Pyruvate kinase family signature 266 290 4.1E-65 T 01-11-2018 IPR001697 Pyruvate kinase GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 CDA09_06435 1070f9539073c37657cc30e9a25c23bf 472 Gene3D G3DSA:2.40.33.10 73 169 1.1E-159 T 01-11-2018 IPR015806 Pyruvate kinase, insert domain superfamily GO:0004743|GO:0006096 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 CDA09_06435 1070f9539073c37657cc30e9a25c23bf 472 TIGRFAM TIGR01064 pyruv_kin: pyruvate kinase 5 470 6.6E-144 T 01-11-2018 IPR001697 Pyruvate kinase GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 CDA09_06435 1070f9539073c37657cc30e9a25c23bf 472 SUPERFAMILY SSF50800 73 168 1.05E-23 T 01-11-2018 IPR011037 Pyruvate kinase-like, insert domain superfamily CDA09_06435 1070f9539073c37657cc30e9a25c23bf 472 SUPERFAMILY SSF51621 2 339 5.58E-97 T 01-11-2018 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain superfamily GO:0003824 CDA09_06435 1070f9539073c37657cc30e9a25c23bf 472 Gene3D G3DSA:3.20.20.60 5 332 1.1E-159 T 01-11-2018 CDA09_01335 a0f76d7ccb54c0d22cc1623f89514a53 398 Pfam PF07494 Two component regulator propeller 202 225 7.3E-4 T 01-11-2018 IPR011110 Two component regulator propeller CDA09_01335 a0f76d7ccb54c0d22cc1623f89514a53 398 Pfam PF07494 Two component regulator propeller 284 306 0.018 T 01-11-2018 IPR011110 Two component regulator propeller CDA09_01335 a0f76d7ccb54c0d22cc1623f89514a53 398 SUPERFAMILY SSF63829 79 349 1.5E-11 T 01-11-2018 CDA09_01335 a0f76d7ccb54c0d22cc1623f89514a53 398 Gene3D G3DSA:2.130.10.10 261 398 7.5E-26 T 01-11-2018 IPR015943 WD40/YVTN repeat-like-containing domain superfamily GO:0005515 CDA09_01335 a0f76d7ccb54c0d22cc1623f89514a53 398 Gene3D G3DSA:2.130.10.10 52 260 1.9E-32 T 01-11-2018 IPR015943 WD40/YVTN repeat-like-containing domain superfamily GO:0005515 CDA09_15965 3deb9e114bf101d7729e77cab4d5bda1 261 Pfam PF02900 Catalytic LigB subunit of aromatic ring-opening dioxygenase 6 258 1.8E-48 T 01-11-2018 IPR004183 Extradiol ring-cleavage dioxygenase, class III enzyme, subunit B GO:0006725|GO:0008198|GO:0016491 CDA09_15965 3deb9e114bf101d7729e77cab4d5bda1 261 PIRSF PIRSF006157 1 260 1.2E-87 T 01-11-2018 IPR014436 Extradiol aromatic ring-opening dioxygenase, DODA-type GO:0008270|GO:0016701|GO:0055114 CDA09_15965 3deb9e114bf101d7729e77cab4d5bda1 261 Gene3D G3DSA:3.40.830.10 1 259 1.0E-91 T 01-11-2018 CDA09_15965 3deb9e114bf101d7729e77cab4d5bda1 261 SUPERFAMILY SSF53213 4 259 5.49E-91 T 01-11-2018 CDA09_21025 c22d503aa814016e489544fc6a4adabe 869 TIGRFAM TIGR01587 cas3_core: CRISPR-associated helicase Cas3 301 703 2.9E-90 T 01-11-2018 IPR006474 Helicase Cas3, CRISPR-associated, core CDA09_21025 c22d503aa814016e489544fc6a4adabe 869 Pfam PF04851 Type III restriction enzyme, res subunit 301 451 7.1E-7 T 01-11-2018 IPR006935 Helicase/UvrB, N-terminal GO:0003677|GO:0005524|GO:0016787 CDA09_21025 c22d503aa814016e489544fc6a4adabe 869 SMART SM00487 278 510 0.0019 T 01-11-2018 IPR014001 Helicase superfamily 1/2, ATP-binding domain CDA09_21025 c22d503aa814016e489544fc6a4adabe 869 Gene3D G3DSA:3.40.50.300 517 684 2.5E-10 T 01-11-2018 CDA09_21025 c22d503aa814016e489544fc6a4adabe 869 SMART SM00490 574 661 0.0081 T 01-11-2018 IPR001650 Helicase, C-terminal CDA09_21025 c22d503aa814016e489544fc6a4adabe 869 Gene3D G3DSA:1.10.3210.30 2 260 2.0E-50 T 01-11-2018 IPR038257 CRISPR-associated Cas3-type HD domain superfamily CDA09_21025 c22d503aa814016e489544fc6a4adabe 869 SUPERFAMILY SSF52540 300 662 7.04E-29 T 01-11-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CDA09_21025 c22d503aa814016e489544fc6a4adabe 869 TIGRFAM TIGR01596 cas3_HD: CRISPR-associated endonuclease Cas3-HD 26 229 2.6E-23 T 01-11-2018 IPR006483 CRISPR-associated Cas3-type HD domain CDA09_04205 ce3f760da3618253f89c1f1e29835592 258 Gene3D G3DSA:3.90.226.10 2 199 1.8E-75 T 01-11-2018 CDA09_04205 ce3f760da3618253f89c1f1e29835592 258 Pfam PF00378 Enoyl-CoA hydratase/isomerase 11 257 2.3E-82 T 01-11-2018 IPR001753 Enoyl-CoA hydratase/isomerase GO:0003824 CDA09_04205 ce3f760da3618253f89c1f1e29835592 258 SUPERFAMILY SSF52096 1 258 6.59E-90 T 01-11-2018 IPR029045 ClpP/crotonase-like domain superfamily CDA09_04205 ce3f760da3618253f89c1f1e29835592 258 Gene3D G3DSA:1.10.12.10 201 257 1.7E-26 T 01-11-2018 IPR014748 Enoyl-CoA hydratase, C-terminal CDA09_04205 ce3f760da3618253f89c1f1e29835592 258 ProSitePatterns PS00166 Enoyl-CoA hydratase/isomerase signature. 99 119 - T 01-11-2018 IPR018376 Enoyl-CoA hydratase/isomerase, conserved site GO:0003824 CDA09_13120 4cd7dce6cd14394f82687d1118b33271 723 SUPERFAMILY SSF53850 32 659 3.08E-89 T 01-11-2018 CDA09_13120 4cd7dce6cd14394f82687d1118b33271 723 PIRSF PIRSF002741 1 86 6.8 T 01-11-2018 IPR030678 Peptide/nickel binding protein, MppA-type GO:0043190|GO:0055085 CDA09_13120 4cd7dce6cd14394f82687d1118b33271 723 PIRSF PIRSF002741 164 672 1.0E-50 T 01-11-2018 IPR030678 Peptide/nickel binding protein, MppA-type GO:0043190|GO:0055085 CDA09_13120 4cd7dce6cd14394f82687d1118b33271 723 Gene3D G3DSA:3.40.190.10 280 388 2.7E-11 T 01-11-2018 CDA09_13120 4cd7dce6cd14394f82687d1118b33271 723 Pfam PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle 164 584 9.7E-48 T 01-11-2018 IPR000914 Solute-binding protein family 5 domain CDA09_13120 4cd7dce6cd14394f82687d1118b33271 723 Gene3D G3DSA:3.90.76.10 43 268 1.5E-23 T 01-11-2018 CDA09_13120 4cd7dce6cd14394f82687d1118b33271 723 Gene3D G3DSA:3.10.105.10 400 643 3.5E-48 T 01-11-2018 CDA09_21845 1566f234fef2f1e09fe080c1926147ff 329 Pfam PF02653 Branched-chain amino acid transport system / permease component 29 296 3.0E-38 T 01-11-2018 IPR001851 ABC transporter, permease GO:0016020|GO:0022857|GO:0055085 CDA09_01410 fc7bd9fb680c681c76610d517371eb1c 438 SUPERFAMILY SSF81442 14 420 8.9E-10 T 01-11-2018 IPR036927 Cytochrome c oxidase-like, subunit I superfamily GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 CDA09_18670 bc3d31b77a2ddbaba2956d33e95b867b 276 SUPERFAMILY SSF53223 2 100 2.01E-30 T 01-11-2018 CDA09_18670 bc3d31b77a2ddbaba2956d33e95b867b 276 Hamap MF_00222 Shikimate dehydrogenase (NADP(+)) [aroE]. 1 273 31.871 T 01-11-2018 IPR022893 Shikimate dehydrogenase family GO:0004764|GO:0055114 KEGG: 00400+1.1.1.25|MetaCyc: PWY-6163 CDA09_18670 bc3d31b77a2ddbaba2956d33e95b867b 276 SUPERFAMILY SSF51735 101 274 1.16E-40 T 01-11-2018 IPR036291 NAD(P)-binding domain superfamily CDA09_18670 bc3d31b77a2ddbaba2956d33e95b867b 276 Pfam PF01488 Shikimate / quinate 5-dehydrogenase 116 195 1.6E-9 T 01-11-2018 IPR006151 Quinate/shikimate 5-dehydrogenase/glutamyl-tRNA reductase CDA09_18670 bc3d31b77a2ddbaba2956d33e95b867b 276 TIGRFAM TIGR00507 aroE: shikimate dehydrogenase 4 274 1.2E-80 T 01-11-2018 IPR011342 Shikimate dehydrogenase GO:0004764|GO:0019632|GO:0050661|GO:0055114 KEGG: 00400+1.1.1.25|MetaCyc: PWY-6163 CDA09_18670 bc3d31b77a2ddbaba2956d33e95b867b 276 Pfam PF08501 Shikimate dehydrogenase substrate binding domain 6 88 4.4E-23 T 01-11-2018 IPR013708 Shikimate dehydrogenase substrate binding, N-terminal GO:0004764|GO:0055114 KEGG: 00400+1.1.1.25|MetaCyc: PWY-6163 CDA09_18670 bc3d31b77a2ddbaba2956d33e95b867b 276 Gene3D G3DSA:3.40.50.720 115 239 1.6E-80 T 01-11-2018 CDA09_18670 bc3d31b77a2ddbaba2956d33e95b867b 276 Gene3D G3DSA:3.40.50.10860 4 258 1.6E-80 T 01-11-2018 CDA09_08725 4092bd4a10ac8dba408676b7e0e1f546 93 Gene3D G3DSA:2.40.10.300 21 93 2.7E-34 T 01-11-2018 IPR038644 CopK superfamily CDA09_08725 4092bd4a10ac8dba408676b7e0e1f546 93 Pfam PF11525 Copper resistance protein K 23 91 1.0E-33 T 01-11-2018 IPR021604 Copper resistance protein K GO:0046872 CDA09_17045 6ee204e2af83d4771808a02836a38cc9 400 SUPERFAMILY SSF53901 278 399 9.73E-43 T 01-11-2018 IPR016039 Thiolase-like GO:0003824 CDA09_17045 6ee204e2af83d4771808a02836a38cc9 400 ProSitePatterns PS00737 Thiolases signature 2. 346 362 - T 01-11-2018 IPR020613 Thiolase, conserved site GO:0016747 CDA09_17045 6ee204e2af83d4771808a02836a38cc9 400 Gene3D G3DSA:3.40.47.10 6 283 4.9E-140 T 01-11-2018 IPR016039 Thiolase-like GO:0003824 CDA09_17045 6ee204e2af83d4771808a02836a38cc9 400 TIGRFAM TIGR01930 AcCoA-C-Actrans: acetyl-CoA C-acyltransferase 6 398 1.8E-130 T 01-11-2018 IPR002155 Thiolase GO:0016747 CDA09_17045 6ee204e2af83d4771808a02836a38cc9 400 Pfam PF02803 Thiolase, C-terminal domain 278 398 5.7E-44 T 01-11-2018 IPR020617 Thiolase, C-terminal GO:0016747 CDA09_17045 6ee204e2af83d4771808a02836a38cc9 400 Gene3D G3DSA:3.40.47.10 126 394 4.9E-140 T 01-11-2018 IPR016039 Thiolase-like GO:0003824 CDA09_17045 6ee204e2af83d4771808a02836a38cc9 400 ProSitePatterns PS00099 Thiolases active site. 381 394 - T 01-11-2018 IPR020610 Thiolase, active site GO:0016747 CDA09_17045 6ee204e2af83d4771808a02836a38cc9 400 PIRSF PIRSF000429 1 400 1.0E-120 T 01-11-2018 IPR002155 Thiolase GO:0016747 CDA09_17045 6ee204e2af83d4771808a02836a38cc9 400 SUPERFAMILY SSF53901 1 273 3.46E-69 T 01-11-2018 IPR016039 Thiolase-like GO:0003824 CDA09_17045 6ee204e2af83d4771808a02836a38cc9 400 Pfam PF00108 Thiolase, N-terminal domain 5 268 1.3E-64 T 01-11-2018 IPR020616 Thiolase, N-terminal GO:0016747 CDA09_16420 568b39356a71f37d8e4f13a6031a74d4 271 Hamap MF_00131 Tryptophan synthase alpha chain [trpA]. 14 262 34.656 T 01-11-2018 IPR002028 Tryptophan synthase, alpha chain GO:0004834|GO:0006568 KEGG: 00260+4.2.1.20|KEGG: 00400+4.2.1.20 CDA09_16420 568b39356a71f37d8e4f13a6031a74d4 271 SUPERFAMILY SSF51366 1 253 4.05E-91 T 01-11-2018 IPR011060 Ribulose-phosphate binding barrel GO:0003824 CDA09_16420 568b39356a71f37d8e4f13a6031a74d4 271 Pfam PF00290 Tryptophan synthase alpha chain 8 257 8.0E-87 T 01-11-2018 IPR002028 Tryptophan synthase, alpha chain GO:0004834|GO:0006568 KEGG: 00260+4.2.1.20|KEGG: 00400+4.2.1.20 CDA09_16420 568b39356a71f37d8e4f13a6031a74d4 271 TIGRFAM TIGR00262 trpA: tryptophan synthase, alpha subunit 8 258 7.5E-76 T 01-11-2018 IPR002028 Tryptophan synthase, alpha chain GO:0004834|GO:0006568 KEGG: 00260+4.2.1.20|KEGG: 00400+4.2.1.20 CDA09_16420 568b39356a71f37d8e4f13a6031a74d4 271 Gene3D G3DSA:3.20.20.70 1 269 1.5E-100 T 01-11-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 CDA09_16420 568b39356a71f37d8e4f13a6031a74d4 271 ProSitePatterns PS00167 Tryptophan synthase alpha chain signature. 48 61 - T 01-11-2018 IPR018204 Tryptophan synthase, alpha chain, active site GO:0004834 KEGG: 00260+4.2.1.20|KEGG: 00400+4.2.1.20 CDA09_20820 41ad9bb464d918286df3fd51e5514d91 159 SUPERFAMILY SSF101307 7 155 3.14E-40 T 01-11-2018 IPR036681 PgpA-like superfamily GO:0006629|GO:0008962 CDA09_20820 41ad9bb464d918286df3fd51e5514d91 159 PIRSF PIRSF006162 3 159 1.2E-43 T 01-11-2018 IPR026037 Phosphatidylglycerophosphatase A KEGG: 00564+3.1.3.27|MetaCyc: PWY-5269|MetaCyc: PWY-5668|MetaCyc: PWY-7817 CDA09_20820 41ad9bb464d918286df3fd51e5514d91 159 Pfam PF04608 Phosphatidylglycerophosphatase A 13 154 6.7E-49 T 01-11-2018 IPR007686 YutG/PgpA domain GO:0006629|GO:0008962 CDA09_12915 2871e83c31b2a6fa0d8d72bd1ba6ccd1 146 Pfam PF02600 Disulfide bond formation protein DsbB 19 139 9.5E-10 T 01-11-2018 IPR003752 Disulphide bond formation protein DsbB/BdbC GO:0015035|GO:0016020 CDA09_12915 2871e83c31b2a6fa0d8d72bd1ba6ccd1 146 PIRSF PIRSF036659 7 146 1.7E-44 T 01-11-2018 IPR012187 Disulphide bond formation protein BdbC CDA09_12915 2871e83c31b2a6fa0d8d72bd1ba6ccd1 146 Gene3D G3DSA:1.20.1550.10 6 108 2.2E-9 T 01-11-2018 IPR023380 DsbB-like superfamily CDA09_12915 2871e83c31b2a6fa0d8d72bd1ba6ccd1 146 SUPERFAMILY SSF158442 17 140 4.71E-28 T 01-11-2018 IPR023380 DsbB-like superfamily CDA09_13315 698a8fb56ece4fff22b6f99711c7f4a9 220 Hamap MF_00479 Ion-translocating oxidoreductase complex subunit G [rsxG]. 8 206 21.816 T 01-11-2018 IPR010209 Ion-translocating oxidoreductase complex, subunit RnfG/RsxG GO:0005886|GO:0009055|GO:0022900 CDA09_13315 698a8fb56ece4fff22b6f99711c7f4a9 220 SMART SM00900 107 204 2.3E-26 T 01-11-2018 IPR007329 FMN-binding GO:0010181|GO:0016020 CDA09_13315 698a8fb56ece4fff22b6f99711c7f4a9 220 TIGRFAM TIGR01947 rnfG: electron transport complex, RnfABCDGE type, G subunit 17 204 2.2E-45 T 01-11-2018 IPR010209 Ion-translocating oxidoreductase complex, subunit RnfG/RsxG GO:0005886|GO:0009055|GO:0022900 CDA09_13315 698a8fb56ece4fff22b6f99711c7f4a9 220 Pfam PF04205 FMN-binding domain 107 201 1.1E-14 T 01-11-2018 IPR007329 FMN-binding GO:0010181|GO:0016020 CDA09_13315 698a8fb56ece4fff22b6f99711c7f4a9 220 PIRSF PIRSF006091 2 216 6.9E-69 T 01-11-2018 IPR010209 Ion-translocating oxidoreductase complex, subunit RnfG/RsxG GO:0005886|GO:0009055|GO:0022900 CDA09_01725 e58877d15e792b263cc892313bad6965 382 Gene3D G3DSA:3.40.50.2300 141 373 1.1E-119 T 01-11-2018 CDA09_01725 e58877d15e792b263cc892313bad6965 382 Pfam PF13458 Periplasmic binding protein 24 376 9.5E-54 T 01-11-2018 IPR028081 Leucine-binding protein domain CDA09_01725 e58877d15e792b263cc892313bad6965 382 SUPERFAMILY SSF53822 23 380 2.51E-77 T 01-11-2018 IPR028082 Periplasmic binding protein-like I CDA09_01725 e58877d15e792b263cc892313bad6965 382 Gene3D G3DSA:3.40.50.2300 26 364 1.1E-119 T 01-11-2018 CDA09_02160 f8e6ec8905fd4a0677251f2bfff1157a 193 Pfam PF05036 Sporulation related domain 117 190 3.8E-17 T 01-11-2018 IPR007730 Sporulation-like domain GO:0042834 CDA09_02160 f8e6ec8905fd4a0677251f2bfff1157a 193 Gene3D G3DSA:3.30.70.1070 111 192 1.5E-13 T 01-11-2018 IPR036680 Sporulation-like domain superfamily GO:0042834 CDA09_02160 f8e6ec8905fd4a0677251f2bfff1157a 193 SUPERFAMILY SSF110997 117 190 4.58E-16 T 01-11-2018 IPR036680 Sporulation-like domain superfamily GO:0042834 CDA09_16830 1768194ef41f049959d67d1774460e28 583 Pfam PF07167 Poly-beta-hydroxybutyrate polymerase (PhaC) N-terminus 94 261 7.1E-57 T 01-11-2018 IPR010941 Poly-beta-hydroxybutyrate polymerase, N-terminal domain GO:0042619 CDA09_16830 1768194ef41f049959d67d1774460e28 583 SUPERFAMILY SSF53474 217 508 1.64E-36 T 01-11-2018 IPR029058 Alpha/Beta hydrolase fold CDA09_16830 1768194ef41f049959d67d1774460e28 583 Gene3D G3DSA:3.40.50.1820 221 512 2.7E-12 T 01-11-2018 IPR029058 Alpha/Beta hydrolase fold CDA09_08655 587c9052e13f669779efa63944aba77f 351 SUPERFAMILY SSF52518 17 237 7.21E-65 T 01-11-2018 IPR029061 Thiamin diphosphate-binding fold CDA09_08655 587c9052e13f669779efa63944aba77f 351 Pfam PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain 66 214 1.1E-25 T 01-11-2018 IPR011766 Thiamine pyrophosphate enzyme, C-terminal TPP-binding GO:0003824|GO:0030976 CDA09_08655 587c9052e13f669779efa63944aba77f 351 Gene3D G3DSA:3.40.50.970 98 243 3.8E-23 T 01-11-2018 CDA09_06405 25aaea7dde8b75a54b3087f1f94809e8 315 Pfam PF00146 NADH dehydrogenase 11 309 2.7E-35 T 01-11-2018 IPR001694 NADH:ubiquinone oxidoreductase, subunit 1/F420H2 oxidoreductase subunit H GO:0016020|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 CDA09_01560 ffbe849ad77115c839991f3d38b7aced 473 Gene3D G3DSA:3.80.30.20 198 408 5.8E-23 T 01-11-2018 IPR023404 Radical SAM, alpha/beta horseshoe CDA09_01560 ffbe849ad77115c839991f3d38b7aced 473 SMART SM00729 199 411 5.5E-24 T 01-11-2018 IPR006638 Elp3/MiaB/NifB GO:0003824|GO:0051536 CDA09_01560 ffbe849ad77115c839991f3d38b7aced 473 Pfam PF04055 Radical SAM superfamily 208 370 6.3E-11 T 01-11-2018 IPR007197 Radical SAM GO:0003824|GO:0051536 CDA09_01560 ffbe849ad77115c839991f3d38b7aced 473 SUPERFAMILY SSF102114 175 399 4.19E-32 T 01-11-2018 CDA09_02000 d6bb0e64e160923b9eda7b7fd8a411ed 106 SUPERFAMILY SSF52833 4 103 1.12E-27 T 01-11-2018 IPR036249 Thioredoxin-like superfamily CDA09_02000 d6bb0e64e160923b9eda7b7fd8a411ed 106 Gene3D G3DSA:3.40.30.10 4 106 1.5E-30 T 01-11-2018 CDA09_02065 d6218a58863d660ae4cd272081c162b4 273 Pfam PF12849 PBP superfamily domain 30 250 5.3E-29 T 01-11-2018 IPR024370 PBP domain CDA09_02065 d6218a58863d660ae4cd272081c162b4 273 Gene3D G3DSA:3.40.190.10 30 257 6.6E-93 T 01-11-2018 CDA09_02065 d6218a58863d660ae4cd272081c162b4 273 Gene3D G3DSA:3.40.190.10 105 220 6.6E-93 T 01-11-2018 CDA09_02065 d6218a58863d660ae4cd272081c162b4 273 SUPERFAMILY SSF53850 28 259 2.68E-34 T 01-11-2018 CDA09_22570 5768770fc7394a688fa8f018f0cb65fc 482 Pfam PF03783 Curli production assembly/transport component CsgG 159 339 4.4E-9 T 01-11-2018 IPR005534 Curli production assembly/transport component CsgG GO:0030288 CDA09_06565 81de21d2ddf91f0ac03d1e9e25b5d463 115 Pfam PF04828 Glutathione-dependent formaldehyde-activating enzyme 25 99 3.2E-7 T 01-11-2018 IPR006913 Glutathione-dependent formaldehyde-activating enzyme/centromere protein V GO:0016846 KEGG: 00680+4.4.1.22|MetaCyc: PWY-1801 CDA09_06565 81de21d2ddf91f0ac03d1e9e25b5d463 115 SUPERFAMILY SSF51316 1 103 1.99E-30 T 01-11-2018 IPR011057 Mss4-like superfamily CDA09_06565 81de21d2ddf91f0ac03d1e9e25b5d463 115 Gene3D G3DSA:2.170.150.70 3 115 7.7E-33 T 01-11-2018 CDA09_22000 dcd4cd419b8befad6dc6c10b3bef0350 437 Pfam PF07044 Protein of unknown function (DUF1329) 52 434 3.1E-80 T 01-11-2018 IPR010752 Protein of unknown function DUF1329 CDA09_06475 167c66704614d174ca85333bb04d93eb 101 SMART SM00749 39 101 5.6E-6 T 01-11-2018 IPR014004 Transport-associated and nodulation domain, bacteria CDA09_06475 167c66704614d174ca85333bb04d93eb 101 Pfam PF04972 BON domain 34 101 4.1E-20 T 01-11-2018 IPR007055 BON domain CDA09_07460 674b6d0dc9e1a885d6877aae1de3a1b7 256 Gene3D G3DSA:1.10.12.10 199 255 1.4E-15 T 01-11-2018 IPR014748 Enoyl-CoA hydratase, C-terminal CDA09_07460 674b6d0dc9e1a885d6877aae1de3a1b7 256 ProSitePatterns PS00166 Enoyl-CoA hydratase/isomerase signature. 97 117 - T 01-11-2018 IPR018376 Enoyl-CoA hydratase/isomerase, conserved site GO:0003824 CDA09_07460 674b6d0dc9e1a885d6877aae1de3a1b7 256 SUPERFAMILY SSF52096 3 255 6.01E-81 T 01-11-2018 IPR029045 ClpP/crotonase-like domain superfamily CDA09_07460 674b6d0dc9e1a885d6877aae1de3a1b7 256 Gene3D G3DSA:3.90.226.10 1 198 4.5E-66 T 01-11-2018 CDA09_07460 674b6d0dc9e1a885d6877aae1de3a1b7 256 Pfam PF00378 Enoyl-CoA hydratase/isomerase 7 255 2.4E-60 T 01-11-2018 IPR001753 Enoyl-CoA hydratase/isomerase GO:0003824 CDA09_10125 f277839f5b430971dfac956596d67799 658 Pfam PF13183 4Fe-4S dicluster domain 284 354 1.0E-8 T 01-11-2018 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain CDA09_10125 f277839f5b430971dfac956596d67799 658 Pfam PF02754 Cysteine-rich domain 542 627 3.2E-15 T 01-11-2018 IPR004017 Cysteine-rich domain CDA09_10125 f277839f5b430971dfac956596d67799 658 Pfam PF02754 Cysteine-rich domain 419 504 2.3E-13 T 01-11-2018 IPR004017 Cysteine-rich domain CDA09_10125 f277839f5b430971dfac956596d67799 658 Gene3D G3DSA:1.10.1060.10 261 375 2.3E-12 T 01-11-2018 IPR009051 Alpha-helical ferredoxin GO:0051536 CDA09_10125 f277839f5b430971dfac956596d67799 658 SUPERFAMILY SSF46548 269 369 4.19E-17 T 01-11-2018 IPR009051 Alpha-helical ferredoxin GO:0051536 CDA09_10125 f277839f5b430971dfac956596d67799 658 SUPERFAMILY SSF103501 5 244 2.75E-15 T 01-11-2018 IPR036197 NarG-like superfamily CDA09_10125 f277839f5b430971dfac956596d67799 658 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 341 352 - T 01-11-2018 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site CDA09_20215 bc458712268469cb77a155874e12dc8c 215 SUPERFAMILY SSF50475 6 197 1.2E-34 T 01-11-2018 CDA09_20215 bc458712268469cb77a155874e12dc8c 215 Pfam PF13883 Pyridoxamine 5'-phosphate oxidase 9 146 1.0E-10 T 01-11-2018 CDA09_20215 bc458712268469cb77a155874e12dc8c 215 Gene3D G3DSA:2.30.110.10 4 145 8.9E-38 T 01-11-2018 IPR012349 FMN-binding split barrel GO:0048037 CDA09_14000 ee1ba20ae46295ab941dafa2170fdb3a 191 SUPERFAMILY SSF53955 31 187 6.43E-12 T 01-11-2018 IPR023346 Lysozyme-like domain superfamily CDA09_14000 ee1ba20ae46295ab941dafa2170fdb3a 191 Pfam PF01464 Transglycosylase SLT domain 49 173 4.4E-8 T 01-11-2018 IPR008258 Transglycosylase SLT domain 1 CDA09_21640 9f88d7d6f6b89524e1f52622096cd62f 466 TIGRFAM TIGR03755 conj_TIGR03755: integrating conjugative element protein, PFL_4711 family 51 461 6.8E-175 T 01-11-2018 IPR021204 Integrating conjugative element protein, PFL4711 CDA09_08295 6156c395730f3c0da832f0f28c65e9a1 486 Gene3D G3DSA:1.10.10.10 1 97 2.7E-17 T 01-11-2018 IPR036388 Winged helix-like DNA-binding domain superfamily CDA09_08295 6156c395730f3c0da832f0f28c65e9a1 486 SUPERFAMILY SSF53383 94 465 3.26E-93 T 01-11-2018 IPR015424 Pyridoxal phosphate-dependent transferase CDA09_08295 6156c395730f3c0da832f0f28c65e9a1 486 Pfam PF00155 Aminotransferase class I and II 146 459 3.5E-31 T 01-11-2018 IPR004839 Aminotransferase, class I/classII GO:0009058|GO:0030170 CDA09_08295 6156c395730f3c0da832f0f28c65e9a1 486 Gene3D G3DSA:3.40.640.10 142 360 6.2E-102 T 01-11-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 CDA09_08295 6156c395730f3c0da832f0f28c65e9a1 486 Gene3D G3DSA:3.90.1150.10 98 464 6.2E-102 T 01-11-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 CDA09_08295 6156c395730f3c0da832f0f28c65e9a1 486 SUPERFAMILY SSF46785 1 75 8.91E-17 T 01-11-2018 IPR036390 Winged helix DNA-binding domain superfamily CDA09_08295 6156c395730f3c0da832f0f28c65e9a1 486 SMART SM00345 7 66 3.9E-13 T 01-11-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 CDA09_08295 6156c395730f3c0da832f0f28c65e9a1 486 Pfam PF00392 Bacterial regulatory proteins, gntR family 3 66 5.5E-13 T 01-11-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 CDA09_00115 371f54d0ae4510d76a1e4d879c99234b 576 SUPERFAMILY SSF161098 61 257 2.35E-22 T 01-11-2018 IPR035906 MetI-like superfamily CDA09_00115 371f54d0ae4510d76a1e4d879c99234b 576 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 85 253 3.1E-15 T 01-11-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 CDA09_00115 371f54d0ae4510d76a1e4d879c99234b 576 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 391 574 5.2E-15 T 01-11-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 CDA09_00115 371f54d0ae4510d76a1e4d879c99234b 576 SUPERFAMILY SSF161098 369 559 2.49E-17 T 01-11-2018 IPR035906 MetI-like superfamily CDA09_00115 371f54d0ae4510d76a1e4d879c99234b 576 Gene3D G3DSA:1.10.3720.10 367 571 1.7E-16 T 01-11-2018 IPR035906 MetI-like superfamily CDA09_00115 371f54d0ae4510d76a1e4d879c99234b 576 Gene3D G3DSA:1.10.3720.10 59 263 1.2E-25 T 01-11-2018 IPR035906 MetI-like superfamily CDA09_12420 8a2e17071b89575885e16c59ba17aa3b 96 Hamap MF_00599 Cell division protein FtsB [ftsB]. 1 89 34.108 T 01-11-2018 IPR023081 Cell division protein FtsB CDA09_12420 8a2e17071b89575885e16c59ba17aa3b 96 Pfam PF04977 Septum formation initiator 11 89 1.2E-26 T 01-11-2018 IPR007060 Septum formation initiator FtsL/DivIC CDA09_06610 8adf8200bfbad14d926f92fea9e77fc8 231 SUPERFAMILY SSF49503 59 153 1.48E-17 T 01-11-2018 IPR008972 Cupredoxin CDA09_06610 8adf8200bfbad14d926f92fea9e77fc8 231 Gene3D G3DSA:2.60.40.420 69 153 5.6E-13 T 01-11-2018 IPR008972 Cupredoxin CDA09_06610 8adf8200bfbad14d926f92fea9e77fc8 231 SUPERFAMILY SSF49464 135 193 2.98E-7 T 01-11-2018 IPR008969 Carboxypeptidase-like, regulatory domain superfamily CDA09_20465 80c258bdf4a5884947f650618dda43e2 297 Pfam PF02678 Pirin 28 133 7.1E-34 T 01-11-2018 IPR003829 Pirin, N-terminal domain Reactome: R-HSA-8935690 CDA09_20465 80c258bdf4a5884947f650618dda43e2 297 SUPERFAMILY SSF51182 13 295 1.46E-82 T 01-11-2018 IPR011051 RmlC-like cupin domain superfamily CDA09_20465 80c258bdf4a5884947f650618dda43e2 297 Pfam PF05726 Pirin C-terminal cupin domain 186 284 1.7E-26 T 01-11-2018 IPR008778 Pirin, C-terminal domain Reactome: R-HSA-8935690 CDA09_20465 80c258bdf4a5884947f650618dda43e2 297 Gene3D G3DSA:2.60.120.10 25 280 5.4E-73 T 01-11-2018 IPR014710 RmlC-like jelly roll fold CDA09_20465 80c258bdf4a5884947f650618dda43e2 297 PIRSF PIRSF006232 9 293 2.7E-90 T 01-11-2018 IPR012093 Pirin Reactome: R-HSA-8935690 CDA09_20465 80c258bdf4a5884947f650618dda43e2 297 Gene3D G3DSA:2.60.120.10 155 254 5.4E-73 T 01-11-2018 IPR014710 RmlC-like jelly roll fold CDA09_16285 b32892e058f8b15ff6a8208262e90dbf 155 SUPERFAMILY SSF75471 3 92 1.83E-25 T 01-11-2018 IPR035920 YhbY-like superfamily CDA09_16285 b32892e058f8b15ff6a8208262e90dbf 155 Pfam PF01985 CRS1 / YhbY (CRM) domain 5 87 8.6E-18 T 01-11-2018 IPR001890 RNA-binding, CRM domain GO:0003723 CDA09_16285 b32892e058f8b15ff6a8208262e90dbf 155 ProDom PD010559 RNA-BINDING YHBY UPF0044 PREDICTED RNA RIBOSOMAL CONTAINING KH BINDING DOMAIN 20 86 2.0E-26 T 01-11-2018 IPR001890 RNA-binding, CRM domain GO:0003723 CDA09_16285 b32892e058f8b15ff6a8208262e90dbf 155 Gene3D G3DSA:3.30.110.60 2 104 2.3E-28 T 01-11-2018 IPR035920 YhbY-like superfamily CDA09_16285 b32892e058f8b15ff6a8208262e90dbf 155 SMART SM01103 4 87 7.8E-36 T 01-11-2018 IPR001890 RNA-binding, CRM domain GO:0003723 CDA09_08820 b95920ad19cf2f19362d44df2eef1b5b 559 Gene3D G3DSA:3.30.70.2450 204 293 2.0E-86 T 01-11-2018 CDA09_08820 b95920ad19cf2f19362d44df2eef1b5b 559 Gene3D G3DSA:3.50.50.60 28 365 2.0E-86 T 01-11-2018 IPR036188 FAD/NAD(P)-binding domain superfamily CDA09_08820 b95920ad19cf2f19362d44df2eef1b5b 559 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 27 49 1.5E-32 T 01-11-2018 CDA09_08820 b95920ad19cf2f19362d44df2eef1b5b 559 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 319 335 1.5E-32 T 01-11-2018 CDA09_08820 b95920ad19cf2f19362d44df2eef1b5b 559 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 337 355 1.5E-32 T 01-11-2018 CDA09_08820 b95920ad19cf2f19362d44df2eef1b5b 559 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 304 319 1.5E-32 T 01-11-2018 CDA09_08820 b95920ad19cf2f19362d44df2eef1b5b 559 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 175 190 1.5E-32 T 01-11-2018 CDA09_08820 b95920ad19cf2f19362d44df2eef1b5b 559 SUPERFAMILY SSF51905 25 401 2.97E-64 T 01-11-2018 IPR036188 FAD/NAD(P)-binding domain superfamily CDA09_08820 b95920ad19cf2f19362d44df2eef1b5b 559 Gene3D G3DSA:3.40.30.120 407 558 1.4E-13 T 01-11-2018 CDA09_08820 b95920ad19cf2f19362d44df2eef1b5b 559 Pfam PF01494 FAD binding domain 26 369 1.8E-64 T 01-11-2018 IPR002938 FAD-binding domain GO:0071949 CDA09_17145 69eecde11edbc1952ac7e16c4af8a1a9 443 Gene3D G3DSA:1.20.1250.20 4 193 5.7E-38 T 01-11-2018 CDA09_17145 69eecde11edbc1952ac7e16c4af8a1a9 443 SUPERFAMILY SSF103473 6 410 8.5E-64 T 01-11-2018 IPR036259 MFS transporter superfamily CDA09_17145 69eecde11edbc1952ac7e16c4af8a1a9 443 Gene3D G3DSA:1.20.1250.20 210 412 1.9E-18 T 01-11-2018 CDA09_17145 69eecde11edbc1952ac7e16c4af8a1a9 443 Pfam PF07690 Major Facilitator Superfamily 14 367 7.5E-40 T 01-11-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 CDA09_11645 ea2669600a674bd6205a103e49119f08 284 SUPERFAMILY SSF161098 9 284 9.68E-56 T 01-11-2018 IPR035906 MetI-like superfamily CDA09_11645 ea2669600a674bd6205a103e49119f08 284 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 96 275 1.0E-14 T 01-11-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 CDA09_11645 ea2669600a674bd6205a103e49119f08 284 Gene3D G3DSA:1.10.3720.10 9 276 3.0E-50 T 01-11-2018 IPR035906 MetI-like superfamily CDA09_17945 206a92c7c5f2814fcbcd590e50a45250 114 Pfam PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase 23 111 5.0E-37 T 01-11-2018 IPR001179 FKBP-type peptidyl-prolyl cis-trans isomerase domain CDA09_17945 206a92c7c5f2814fcbcd590e50a45250 114 Gene3D G3DSA:3.10.50.40 2 114 1.2E-50 T 01-11-2018 CDA09_17945 206a92c7c5f2814fcbcd590e50a45250 114 SUPERFAMILY SSF54534 4 113 2.55E-46 T 01-11-2018 CDA09_14030 1cf11d6e1f73d7d8107af707b29a5d03 144 TIGRFAM TIGR03750 conj_TIGR03750: conjugative transfer region protein, TIGR03750 family 20 129 2.8E-27 T 01-11-2018 IPR021877 Protein of unknown function DUF3487 CDA09_14030 1cf11d6e1f73d7d8107af707b29a5d03 144 Pfam PF11990 Protein of unknown function (DUF3487) 22 130 1.7E-23 T 01-11-2018 IPR021877 Protein of unknown function DUF3487 CDA09_08720 aee018d2665d87d7772cb81b5e234746 318 SUPERFAMILY SSF53474 16 309 1.62E-56 T 01-11-2018 IPR029058 Alpha/Beta hydrolase fold CDA09_08720 aee018d2665d87d7772cb81b5e234746 318 Pfam PF00561 alpha/beta hydrolase fold 34 294 8.2E-29 T 01-11-2018 IPR000073 Alpha/beta hydrolase fold-1 CDA09_08720 aee018d2665d87d7772cb81b5e234746 318 TIGRFAM TIGR01249 pro_imino_pep_1: prolyl aminopeptidase 7 307 8.7E-83 T 01-11-2018 IPR005944 Proline iminopeptidase GO:0004177|GO:0005737|GO:0006508 KEGG: 00330+3.4.11.5 CDA09_08720 aee018d2665d87d7772cb81b5e234746 318 PIRSF PIRSF006431 1 312 8.0E-100 T 01-11-2018 IPR005944 Proline iminopeptidase GO:0004177|GO:0005737|GO:0006508 KEGG: 00330+3.4.11.5 CDA09_08720 aee018d2665d87d7772cb81b5e234746 318 Gene3D G3DSA:3.40.50.1820 2 310 2.8E-88 T 01-11-2018 IPR029058 Alpha/Beta hydrolase fold CDA09_08720 aee018d2665d87d7772cb81b5e234746 318 PRINTS PR00793 Prolyl aminopeptidase (S33) family signature 35 43 1.2E-13 T 01-11-2018 IPR002410 Peptidase S33 GO:0006508|GO:0008233 KEGG: 00330+3.4.11.5 CDA09_08720 aee018d2665d87d7772cb81b5e234746 318 PRINTS PR00793 Prolyl aminopeptidase (S33) family signature 61 72 1.2E-13 T 01-11-2018 IPR002410 Peptidase S33 GO:0006508|GO:0008233 KEGG: 00330+3.4.11.5 CDA09_08720 aee018d2665d87d7772cb81b5e234746 318 PRINTS PR00793 Prolyl aminopeptidase (S33) family signature 104 118 1.2E-13 T 01-11-2018 IPR002410 Peptidase S33 GO:0006508|GO:0008233 KEGG: 00330+3.4.11.5 CDA09_21825 b4fef3e56ccd9e0dab53875fd37e9e4a 388 Gene3D G3DSA:3.40.50.11900 241 388 5.5E-25 T 01-11-2018 CDA09_21825 b4fef3e56ccd9e0dab53875fd37e9e4a 388 Pfam PF06050 2-hydroxyglutaryl-CoA dehydratase, D-component 48 383 1.0E-44 T 01-11-2018 IPR010327 FldB/FldC dehydratase alpha/beta subunit CDA09_21825 b4fef3e56ccd9e0dab53875fd37e9e4a 388 Gene3D G3DSA:1.20.1270.370 21 227 2.2E-59 T 01-11-2018 CDA09_21825 b4fef3e56ccd9e0dab53875fd37e9e4a 388 Gene3D G3DSA:3.40.50.11890 41 164 2.2E-59 T 01-11-2018 CDA09_19305 13db7c6e2d5e0e50911a25f6cec8fadd 321 Gene3D G3DSA:3.60.15.10 10 272 1.3E-61 T 01-11-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like CDA09_19305 13db7c6e2d5e0e50911a25f6cec8fadd 321 Pfam PF00753 Metallo-beta-lactamase superfamily 21 228 3.0E-25 T 01-11-2018 IPR001279 Metallo-beta-lactamase CDA09_19305 13db7c6e2d5e0e50911a25f6cec8fadd 321 SMART SM00849 23 228 9.4E-31 T 01-11-2018 IPR001279 Metallo-beta-lactamase CDA09_19305 13db7c6e2d5e0e50911a25f6cec8fadd 321 SUPERFAMILY SSF56281 7 261 1.57E-51 T 01-11-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like CDA09_08955 7bee3ba877b36d43de67d34bd1426fad 685 Gene3D G3DSA:1.20.1730.10 342 664 4.7E-26 T 01-11-2018 IPR038377 Sodium/glucose symporter superfamily CDA09_08955 7bee3ba877b36d43de67d34bd1426fad 685 Gene3D G3DSA:1.20.1730.10 57 269 5.1E-33 T 01-11-2018 IPR038377 Sodium/glucose symporter superfamily CDA09_08955 7bee3ba877b36d43de67d34bd1426fad 685 Pfam PF00474 Sodium:solute symporter family 69 240 3.0E-32 T 01-11-2018 IPR001734 Sodium/solute symporter GO:0016020|GO:0022857|GO:0055085 CDA09_08955 7bee3ba877b36d43de67d34bd1426fad 685 Pfam PF00474 Sodium:solute symporter family 489 604 1.2E-23 T 01-11-2018 IPR001734 Sodium/solute symporter GO:0016020|GO:0022857|GO:0055085 CDA09_08955 7bee3ba877b36d43de67d34bd1426fad 685 TIGRFAM TIGR03648 Na_symport_lg: probable sodium:solute symporter, VC_2705 subfamily 45 671 1.4E-229 T 01-11-2018 IPR019899 Sodium/solute symporter, VC2705 subfamily CDA09_01180 14f182aaef226da52a6b5b76ef4965c3 360 SUPERFAMILY SSF53474 40 352 4.19E-70 T 01-11-2018 IPR029058 Alpha/Beta hydrolase fold CDA09_01180 14f182aaef226da52a6b5b76ef4965c3 360 Gene3D G3DSA:3.40.50.1820 242 355 1.9E-9 T 01-11-2018 IPR029058 Alpha/Beta hydrolase fold CDA09_01180 14f182aaef226da52a6b5b76ef4965c3 360 Pfam PF10503 Esterase PHB depolymerase 248 351 2.0E-5 T 01-11-2018 IPR010126 Esterase, PHB depolymerase GO:0005576|GO:0016787 CDA09_05840 3c9d0e6d576ba6eb97677b37a7f8b2b5 71 SUPERFAMILY SSF50331 6 69 2.07E-15 T 01-11-2018 IPR008995 Molybdate/tungstate binding, C-terminal CDA09_05840 3c9d0e6d576ba6eb97677b37a7f8b2b5 71 TIGRFAM TIGR00638 Mop: molybdenum-pterin binding domain 5 69 1.0E-16 T 01-11-2018 IPR004606 Molybdenum-pterin binding GO:0015689 CDA09_05840 3c9d0e6d576ba6eb97677b37a7f8b2b5 71 Gene3D G3DSA:2.40.50.100 5 70 3.5E-18 T 01-11-2018 CDA09_05840 3c9d0e6d576ba6eb97677b37a7f8b2b5 71 Pfam PF03459 TOBE domain 8 67 1.6E-13 T 01-11-2018 IPR005116 Transport-associated OB, type 1 CDA09_21270 b941eac2ad3a22898d45d019485c3ee0 201 Pfam PF01323 DSBA-like thioredoxin domain 5 191 8.3E-32 T 01-11-2018 IPR001853 DSBA-like thioredoxin domain GO:0015035 Reactome: R-HSA-156590|Reactome: R-HSA-9033241 CDA09_21270 b941eac2ad3a22898d45d019485c3ee0 201 PIRSF PIRSF006386 1 199 4.1E-50 T 01-11-2018 IPR014440 HCCA isomerase/glutathione S-transferase kappa Reactome: R-HSA-156590|Reactome: R-HSA-9033241 CDA09_21270 b941eac2ad3a22898d45d019485c3ee0 201 Gene3D G3DSA:3.40.30.10 5 199 2.1E-55 T 01-11-2018 CDA09_21270 b941eac2ad3a22898d45d019485c3ee0 201 SUPERFAMILY SSF52833 5 197 1.86E-38 T 01-11-2018 IPR036249 Thioredoxin-like superfamily CDA09_04445 e7b80c9786c0cc49b5264ee87aa985a3 81 SUPERFAMILY SSF50182 8 70 8.8E-24 T 01-11-2018 IPR010920 LSM domain superfamily CDA09_04445 e7b80c9786c0cc49b5264ee87aa985a3 81 Hamap MF_00436 RNA-binding protein Hfq [hfq]. 1 65 27.917 T 01-11-2018 IPR005001 RNA-binding protein Hfq GO:0003723|GO:0006355 CDA09_04445 e7b80c9786c0cc49b5264ee87aa985a3 81 Pfam PF17209 Hfq protein 8 70 1.3E-31 T 01-11-2018 IPR005001 RNA-binding protein Hfq GO:0003723|GO:0006355 CDA09_04445 e7b80c9786c0cc49b5264ee87aa985a3 81 Gene3D G3DSA:2.30.30.100 1 79 9.3E-34 T 01-11-2018 CDA09_04445 e7b80c9786c0cc49b5264ee87aa985a3 81 TIGRFAM TIGR02383 Hfq: RNA chaperone Hfq 8 65 9.5E-29 T 01-11-2018 IPR005001 RNA-binding protein Hfq GO:0003723|GO:0006355 CDA09_21905 e8be1411efeebb08a64abdb13370c5f5 569 Gene3D G3DSA:3.40.50.410 391 562 3.2E-10 T 01-11-2018 IPR036465 von Willebrand factor A-like domain superfamily CDA09_21905 e8be1411efeebb08a64abdb13370c5f5 569 SUPERFAMILY SSF53300 396 556 9.2E-15 T 01-11-2018 IPR036465 von Willebrand factor A-like domain superfamily CDA09_07520 e8be1411efeebb08a64abdb13370c5f5 569 Gene3D G3DSA:3.40.50.410 391 562 3.2E-10 T 01-11-2018 IPR036465 von Willebrand factor A-like domain superfamily CDA09_07520 e8be1411efeebb08a64abdb13370c5f5 569 SUPERFAMILY SSF53300 396 556 9.2E-15 T 01-11-2018 IPR036465 von Willebrand factor A-like domain superfamily CDA09_15535 a823910f1a7627666907f00391f41724 64 Gene3D G3DSA:3.30.70.20 2 64 1.3E-24 T 01-11-2018 CDA09_15535 a823910f1a7627666907f00391f41724 64 SUPERFAMILY SSF54862 6 61 3.31E-17 T 01-11-2018 CDA09_15535 a823910f1a7627666907f00391f41724 64 Pfam PF00037 4Fe-4S binding domain 7 24 8.1E-5 T 01-11-2018 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain CDA09_15535 a823910f1a7627666907f00391f41724 64 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 9 20 - T 01-11-2018 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site CDA09_14830 4315b8766220bae9e8264f4524d6a42e 157 Pfam PF01161 Phosphatidylethanolamine-binding protein 16 154 1.1E-37 T 01-11-2018 IPR008914 Phosphatidylethanolamine-binding protein CDA09_14830 4315b8766220bae9e8264f4524d6a42e 157 Gene3D G3DSA:3.90.280.10 2 157 3.7E-55 T 01-11-2018 IPR036610 PEBP-like superfamily CDA09_14830 4315b8766220bae9e8264f4524d6a42e 157 SUPERFAMILY SSF49777 3 156 2.22E-46 T 01-11-2018 IPR036610 PEBP-like superfamily CDA09_14830 4315b8766220bae9e8264f4524d6a42e 157 TIGRFAM TIGR00481 TIGR00481: Raf kinase inhibitor-like protein, YbhB/YbcL family 21 152 3.3E-38 T 01-11-2018 IPR005247 YbhB/YbcL CDA09_11715 337ddad78462c16462d7d155bba73b05 386 Gene3D G3DSA:3.40.630.30 185 334 4.4E-7 T 01-11-2018 CDA09_11715 337ddad78462c16462d7d155bba73b05 386 Pfam PF04339 Peptidogalycan biosysnthesis/recognition 13 380 1.1E-121 T 01-11-2018 IPR007434 Peptidogalycan biosysnthesis/recognition CDA09_11715 337ddad78462c16462d7d155bba73b05 386 SUPERFAMILY SSF55729 182 352 1.25E-33 T 01-11-2018 IPR016181 Acyl-CoA N-acyltransferase CDA09_02135 1d0da008489ab1ebcf3f0ff7d4e6af2f 204 TIGRFAM TIGR01409 TAT_signal_seq: Tat (twin-arginine translocation) pathway signal sequence 25 57 7.9E-7 T 01-11-2018 IPR019546 Twin-arginine translocation pathway, signal sequence, bacterial/archaeal CDA09_03810 d099846403ed470ec0228770f2a2048e 363 SUPERFAMILY SSF117916 1 84 1.28E-17 T 01-11-2018 IPR034904 Fe-S cluster assembly domain superfamily CDA09_03810 d099846403ed470ec0228770f2a2048e 363 ProSitePatterns PS01215 Mrp family signature. 204 220 - T 01-11-2018 IPR000808 Mrp, conserved site GO:0005524 CDA09_03810 d099846403ed470ec0228770f2a2048e 363 Gene3D G3DSA:3.40.50.300 86 339 1.6E-85 T 01-11-2018 CDA09_03810 d099846403ed470ec0228770f2a2048e 363 Hamap MF_02040 Iron-sulfur cluster carrier protein. 92 341 37.716 T 01-11-2018 IPR019591 Mrp/NBP35 ATP-binding protein CDA09_03810 d099846403ed470ec0228770f2a2048e 363 SUPERFAMILY SSF52540 89 325 4.64E-61 T 01-11-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CDA09_03810 d099846403ed470ec0228770f2a2048e 363 Pfam PF01883 Iron-sulfur cluster assembly protein 6 77 7.3E-22 T 01-11-2018 IPR002744 MIP18 family-like CDA09_03810 d099846403ed470ec0228770f2a2048e 363 Pfam PF10609 NUBPL iron-transfer P-loop NTPase 97 340 3.6E-103 T 01-11-2018 IPR033756 Flagellum site-determining protein YlxH/ Fe-S cluster assembling factor NBP35 CDA09_13425 0aa7bbae384cf06553440fee2b1381bf 270 SUPERFAMILY SSF69593 64 231 2.48E-18 T 01-11-2018 CDA09_13425 0aa7bbae384cf06553440fee2b1381bf 270 SMART SM00563 92 200 5.3E-12 T 01-11-2018 IPR002123 Phospholipid/glycerol acyltransferase GO:0016746 CDA09_13425 0aa7bbae384cf06553440fee2b1381bf 270 Pfam PF01553 Acyltransferase 82 197 1.3E-9 T 01-11-2018 IPR002123 Phospholipid/glycerol acyltransferase GO:0016746 CDA09_15020 4c6471f76ab845f75ebb2a274b122345 151 PIRSF PIRSF032131 1 151 1.9E-44 T 01-11-2018 IPR009562 Protein of unknown function DUF1178 CDA09_15020 4c6471f76ab845f75ebb2a274b122345 151 Pfam PF06676 Protein of unknown function (DUF1178) 2 146 2.7E-49 T 01-11-2018 IPR009562 Protein of unknown function DUF1178 CDA09_18885 04c548672904598e1b670ee19f2dfd73 101 Gene3D G3DSA:1.10.20.30 1 45 2.4E-11 T 01-11-2018 CDA09_18885 04c548672904598e1b670ee19f2dfd73 101 SUPERFAMILY SSF102829 7 94 3.01E-18 T 01-11-2018 IPR036192 Cell division protein ZapA-like superfamily CDA09_18885 04c548672904598e1b670ee19f2dfd73 101 Pfam PF05164 Cell division protein ZapA 8 89 1.2E-16 T 01-11-2018 IPR007838 Cell division protein ZapA-like CDA09_01465 a02f1ad567238226470a2873e9482033 216 Pfam PF09699 Doubled CXXCH motif (Paired_CXXCH_1) 185 215 1.1E-6 T 01-11-2018 IPR010177 Doubled CXXCH motif CDA09_01465 a02f1ad567238226470a2873e9482033 216 SUPERFAMILY SSF48695 5 214 6.46E-13 T 01-11-2018 IPR036280 Multiheme cytochrome superfamily CDA09_00855 1ad9f8a0e132143d9bcdad22b60fe671 435 SUPERFAMILY SSF53955 181 404 4.5E-21 T 01-11-2018 IPR023346 Lysozyme-like domain superfamily CDA09_21960 36074c19d16ab9a7d9977d62ab787652 406 Gene3D G3DSA:1.10.540.10 1 135 8.5E-25 T 01-11-2018 IPR037069 Acyl-CoA dehydrogenase/oxidase, N-terminal domain superfamily GO:0016627|GO:0050660|GO:0055114 CDA09_21960 36074c19d16ab9a7d9977d62ab787652 406 Pfam PF02771 Acyl-CoA dehydrogenase, N-terminal domain 6 133 1.0E-18 T 01-11-2018 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal GO:0016627|GO:0050660|GO:0055114 CDA09_21960 36074c19d16ab9a7d9977d62ab787652 406 SUPERFAMILY SSF47203 242 395 1.03E-41 T 01-11-2018 IPR036250 Acyl-CoA dehydrogenase-like, C-terminal GO:0016627|GO:0055114 CDA09_21960 36074c19d16ab9a7d9977d62ab787652 406 Pfam PF02770 Acyl-CoA dehydrogenase, middle domain 137 230 1.4E-17 T 01-11-2018 IPR006091 Acyl-CoA oxidase/dehydrogenase, central domain GO:0016627|GO:0055114 CDA09_21960 36074c19d16ab9a7d9977d62ab787652 406 Gene3D G3DSA:2.40.110.10 136 251 3.2E-30 T 01-11-2018 CDA09_21960 36074c19d16ab9a7d9977d62ab787652 406 Gene3D G3DSA:1.20.140.10 252 396 7.4E-39 T 01-11-2018 CDA09_21960 36074c19d16ab9a7d9977d62ab787652 406 SUPERFAMILY SSF56645 1 242 8.51E-54 T 01-11-2018 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain superfamily GO:0016627|GO:0055114 CDA09_21960 36074c19d16ab9a7d9977d62ab787652 406 Pfam PF00441 Acyl-CoA dehydrogenase, C-terminal domain 251 393 1.3E-33 T 01-11-2018 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal GO:0016627|GO:0055114 CDA09_21925 bca795d39bf0ee8cdc41611e919fb0bd 194 TIGRFAM TIGR03831 YgiT_finger: YgiT-type zinc finger domain 120 164 7.2E-13 T 01-11-2018 IPR022453 Zinc finger, MqsA-type CDA09_21925 bca795d39bf0ee8cdc41611e919fb0bd 194 Pfam PF14076 Domain of unknown function (DUF4258) 24 90 8.0E-8 T 01-11-2018 IPR025354 Protein of unknown function DUF4258 CDA09_13085 103d3701440531e9e42c9d3eb166374a 186 Pfam PF13511 Domain of unknown function (DUF4124) 9 59 5.0E-12 T 01-11-2018 IPR025392 Domain of unknown function DUF4124 CDA09_01325 fef5e0d115e26bcfcad200e9f8f3c518 158 Gene3D G3DSA:1.10.8.640 17 98 8.3E-30 T 01-11-2018 IPR038297 CcmH/CycL/Ccl2/NrfF domain superfamily CDA09_01325 fef5e0d115e26bcfcad200e9f8f3c518 158 Pfam PF03918 Cytochrome C biogenesis protein 7 146 4.0E-49 T 01-11-2018 IPR005616 CcmH/CycL/Ccl2/NrfF family CDA09_18935 5d687cba4e06c509f21b246a0a00b78b 67 Pfam PF10636 Hemin uptake protein hemP 31 67 1.9E-16 T 01-11-2018 IPR019600 Hemin uptake protein HemP CDA09_18935 5d687cba4e06c509f21b246a0a00b78b 67 Gene3D G3DSA:2.10.70.10 26 67 7.5E-14 T 01-11-2018 CDA09_01195 8d370d48d1d90c8dd7b183efb182d056 322 Pfam PF09925 Predicted membrane protein (DUF2157) 42 152 7.7E-23 T 01-11-2018 IPR018677 Domain of unknown function DUF2157 CDA09_09805 acf5d98216242017b1a7c1285182b240 334 Pfam PF12625 Arabinose-binding domain of AraC transcription regulator, N-term 21 203 1.3E-28 T 01-11-2018 IPR032687 HTH-type transcriptional regulator AraC-type, N-terminal CDA09_09805 acf5d98216242017b1a7c1285182b240 334 SMART SM00342 247 329 1.1E-20 T 01-11-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 CDA09_09805 acf5d98216242017b1a7c1285182b240 334 Pfam PF12833 Helix-turn-helix domain 253 329 1.3E-12 T 01-11-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 CDA09_09805 acf5d98216242017b1a7c1285182b240 334 SUPERFAMILY SSF46689 283 329 5.38E-9 T 01-11-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 CDA09_09805 acf5d98216242017b1a7c1285182b240 334 Gene3D G3DSA:1.10.10.60 227 333 1.0E-19 T 01-11-2018 CDA09_16385 55596383ce9f3d2578bbdc085fe1c51c 164 Gene3D G3DSA:2.40.100.10 1 164 4.4E-68 T 01-11-2018 IPR029000 Cyclophilin-like domain superfamily CDA09_16385 55596383ce9f3d2578bbdc085fe1c51c 164 ProSitePatterns PS00170 Cyclophilin-type peptidyl-prolyl cis-trans isomerase signature. 37 54 - T 01-11-2018 IPR020892 Cyclophilin-type peptidyl-prolyl cis-trans isomerase, conserved site GO:0003755|GO:0006457 CDA09_16385 55596383ce9f3d2578bbdc085fe1c51c 164 PRINTS PR00153 Cyclophilin peptidyl-prolyl cis-trans isomerase signature 16 31 8.6E-13 T 01-11-2018 IPR002130 Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain GO:0000413|GO:0003755 CDA09_16385 55596383ce9f3d2578bbdc085fe1c51c 164 PRINTS PR00153 Cyclophilin peptidyl-prolyl cis-trans isomerase signature 42 54 8.6E-13 T 01-11-2018 IPR002130 Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain GO:0000413|GO:0003755 CDA09_16385 55596383ce9f3d2578bbdc085fe1c51c 164 PRINTS PR00153 Cyclophilin peptidyl-prolyl cis-trans isomerase signature 119 134 8.6E-13 T 01-11-2018 IPR002130 Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain GO:0000413|GO:0003755 CDA09_16385 55596383ce9f3d2578bbdc085fe1c51c 164 PIRSF PIRSF001467 1 163 5.0E-28 T 01-11-2018 IPR024936 Cyclophilin-type peptidyl-prolyl cis-trans isomerase GO:0003755 CDA09_16385 55596383ce9f3d2578bbdc085fe1c51c 164 SUPERFAMILY SSF50891 3 163 3.21E-58 T 01-11-2018 IPR029000 Cyclophilin-like domain superfamily CDA09_16385 55596383ce9f3d2578bbdc085fe1c51c 164 Pfam PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD 3 162 1.7E-46 T 01-11-2018 IPR002130 Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain GO:0000413|GO:0003755 CDA09_06745 f9c19b2497b278c67e226ef07f28889a 357 PRINTS PR01010 Flagellar P-ring protein signature 97 114 4.8E-86 T 01-11-2018 IPR001782 Flagellar P-ring protein GO:0005198|GO:0009428|GO:0030288|GO:0071973 CDA09_06745 f9c19b2497b278c67e226ef07f28889a 357 PRINTS PR01010 Flagellar P-ring protein signature 29 44 4.8E-86 T 01-11-2018 IPR001782 Flagellar P-ring protein GO:0005198|GO:0009428|GO:0030288|GO:0071973 CDA09_06745 f9c19b2497b278c67e226ef07f28889a 357 PRINTS PR01010 Flagellar P-ring protein signature 114 132 4.8E-86 T 01-11-2018 IPR001782 Flagellar P-ring protein GO:0005198|GO:0009428|GO:0030288|GO:0071973 CDA09_06745 f9c19b2497b278c67e226ef07f28889a 357 PRINTS PR01010 Flagellar P-ring protein signature 49 64 4.8E-86 T 01-11-2018 IPR001782 Flagellar P-ring protein GO:0005198|GO:0009428|GO:0030288|GO:0071973 CDA09_06745 f9c19b2497b278c67e226ef07f28889a 357 PRINTS PR01010 Flagellar P-ring protein signature 154 172 4.8E-86 T 01-11-2018 IPR001782 Flagellar P-ring protein GO:0005198|GO:0009428|GO:0030288|GO:0071973 CDA09_06745 f9c19b2497b278c67e226ef07f28889a 357 PRINTS PR01010 Flagellar P-ring protein signature 244 256 4.8E-86 T 01-11-2018 IPR001782 Flagellar P-ring protein GO:0005198|GO:0009428|GO:0030288|GO:0071973 CDA09_06745 f9c19b2497b278c67e226ef07f28889a 357 PRINTS PR01010 Flagellar P-ring protein signature 14 29 4.8E-86 T 01-11-2018 IPR001782 Flagellar P-ring protein GO:0005198|GO:0009428|GO:0030288|GO:0071973 CDA09_06745 f9c19b2497b278c67e226ef07f28889a 357 PRINTS PR01010 Flagellar P-ring protein signature 75 94 4.8E-86 T 01-11-2018 IPR001782 Flagellar P-ring protein GO:0005198|GO:0009428|GO:0030288|GO:0071973 CDA09_06745 f9c19b2497b278c67e226ef07f28889a 357 PRINTS PR01010 Flagellar P-ring protein signature 180 198 4.8E-86 T 01-11-2018 IPR001782 Flagellar P-ring protein GO:0005198|GO:0009428|GO:0030288|GO:0071973 CDA09_06745 f9c19b2497b278c67e226ef07f28889a 357 Pfam PF02119 Flagellar P-ring protein 14 356 6.5E-138 T 01-11-2018 IPR001782 Flagellar P-ring protein GO:0005198|GO:0009428|GO:0030288|GO:0071973 CDA09_06745 f9c19b2497b278c67e226ef07f28889a 357 Hamap MF_00416 Flagellar P-ring protein [flgI]. 1 357 37.545 T 01-11-2018 IPR001782 Flagellar P-ring protein GO:0005198|GO:0009428|GO:0030288|GO:0071973 CDA09_05740 520e236c41804fff6254c6b68009a29c 290 Pfam PF04344 Chemotaxis phosphatase, CheZ 93 290 1.1E-74 T 01-11-2018 IPR007439 Chemotaxis phosphatase, CheZ GO:0003824|GO:0009288|GO:0050920 CDA09_05740 520e236c41804fff6254c6b68009a29c 290 SUPERFAMILY SSF75708 89 289 6.28E-61 T 01-11-2018 CDA09_05740 520e236c41804fff6254c6b68009a29c 290 PIRSF PIRSF002884 79 290 1.3E-70 T 01-11-2018 IPR007439 Chemotaxis phosphatase, CheZ GO:0003824|GO:0009288|GO:0050920 CDA09_05740 520e236c41804fff6254c6b68009a29c 290 Gene3D G3DSA:1.10.287.500 112 245 1.1E-47 T 01-11-2018 CDA09_01730 539783c4c034b0464605953661d1d75e 345 Pfam PF02653 Branched-chain amino acid transport system / permease component 107 330 6.2E-18 T 01-11-2018 IPR001851 ABC transporter, permease GO:0016020|GO:0022857|GO:0055085 CDA09_11040 c455df8915e478bb69ac7cffa324c23c 403 SUPERFAMILY SSF55961 155 397 1.02E-52 T 01-11-2018 CDA09_11040 c455df8915e478bb69ac7cffa324c23c 403 Gene3D G3DSA:3.90.380.10 14 394 9.7E-151 T 01-11-2018 CDA09_11040 c455df8915e478bb69ac7cffa324c23c 403 Pfam PF00355 Rieske [2Fe-2S] domain 43 118 4.1E-17 T 01-11-2018 IPR017941 Rieske [2Fe-2S] iron-sulphur domain GO:0016491|GO:0051537|GO:0055114 CDA09_11040 c455df8915e478bb69ac7cffa324c23c 403 SUPERFAMILY SSF50022 11 152 1.83E-43 T 01-11-2018 IPR036922 Rieske [2Fe-2S] iron-sulphur domain superfamily GO:0016491|GO:0051537|GO:0055114 CDA09_11040 c455df8915e478bb69ac7cffa324c23c 403 Gene3D G3DSA:2.102.10.10 40 158 9.7E-151 T 01-11-2018 IPR036922 Rieske [2Fe-2S] iron-sulphur domain superfamily GO:0016491|GO:0051537|GO:0055114 CDA09_11040 c455df8915e478bb69ac7cffa324c23c 403 PRINTS PR00090 Ring hydroxylating dioxygenase alpha-subunit signature 27 52 1.6E-22 T 01-11-2018 IPR001663 Aromatic-ring-hydroxylating dioxygenase, alpha subunit GO:0044237|GO:0051537|GO:0055114 CDA09_11040 c455df8915e478bb69ac7cffa324c23c 403 PRINTS PR00090 Ring hydroxylating dioxygenase alpha-subunit signature 78 98 1.6E-22 T 01-11-2018 IPR001663 Aromatic-ring-hydroxylating dioxygenase, alpha subunit GO:0044237|GO:0051537|GO:0055114 CDA09_11040 c455df8915e478bb69ac7cffa324c23c 403 PRINTS PR00090 Ring hydroxylating dioxygenase alpha-subunit signature 99 119 1.6E-22 T 01-11-2018 IPR001663 Aromatic-ring-hydroxylating dioxygenase, alpha subunit GO:0044237|GO:0051537|GO:0055114 CDA09_11040 c455df8915e478bb69ac7cffa324c23c 403 PRINTS PR00090 Ring hydroxylating dioxygenase alpha-subunit signature 138 164 1.6E-22 T 01-11-2018 IPR001663 Aromatic-ring-hydroxylating dioxygenase, alpha subunit GO:0044237|GO:0051537|GO:0055114 CDA09_11040 c455df8915e478bb69ac7cffa324c23c 403 PRINTS PR00090 Ring hydroxylating dioxygenase alpha-subunit signature 57 72 1.6E-22 T 01-11-2018 IPR001663 Aromatic-ring-hydroxylating dioxygenase, alpha subunit GO:0044237|GO:0051537|GO:0055114 CDA09_11040 c455df8915e478bb69ac7cffa324c23c 403 PRINTS PR00090 Ring hydroxylating dioxygenase alpha-subunit signature 175 197 1.6E-22 T 01-11-2018 IPR001663 Aromatic-ring-hydroxylating dioxygenase, alpha subunit GO:0044237|GO:0051537|GO:0055114 CDA09_11040 c455df8915e478bb69ac7cffa324c23c 403 Pfam PF00848 Ring hydroxylating alpha subunit (catalytic domain) 174 398 2.9E-40 T 01-11-2018 IPR015879 Aromatic-ring-hydroxylating dioxygenase, alpha subunit, C-terminal domain GO:0005506|GO:0044237|GO:0051537|GO:0055114 CDA09_12320 9cf5c1a8b82ec0ea672b779124a20972 69 Pfam PF07311 Dodecin 5 68 3.6E-30 T 01-11-2018 IPR009923 Dodecin CDA09_12320 9cf5c1a8b82ec0ea672b779124a20972 69 SUPERFAMILY SSF89807 4 68 1.14E-25 T 01-11-2018 IPR036694 Dodecin-like superfamily CDA09_12320 9cf5c1a8b82ec0ea672b779124a20972 69 Gene3D G3DSA:3.30.1660.10 2 69 5.5E-35 T 01-11-2018 IPR025543 Dodecin-like CDA09_02425 9ea8ac51866b4605be6b02f5fcf9119c 216 Pfam PF04340 Protein of unknown function, DUF484 2 213 4.0E-38 T 01-11-2018 IPR007435 Protein of unknown function DUF484 CDA09_02425 9ea8ac51866b4605be6b02f5fcf9119c 216 Gene3D G3DSA:3.30.450.40 36 214 2.0E-47 T 01-11-2018 IPR029016 GAF-like domain superfamily CDA09_02425 9ea8ac51866b4605be6b02f5fcf9119c 216 SUPERFAMILY SSF55781 159 213 3.27E-6 T 01-11-2018 CDA09_04215 2e254338186fe8016f60c480bab11925 191 TIGRFAM TIGR04409 LptC_YrbK: LPS export ABC transporter periplasmic protein LptC 8 183 1.1E-42 T 01-11-2018 IPR026265 Lipopolysaccharide export system protein LptC GO:0005887|GO:0015221|GO:0015920 CDA09_04215 2e254338186fe8016f60c480bab11925 191 Pfam PF06835 Lipopolysaccharide-assembly, LptC-related 14 182 7.5E-31 T 01-11-2018 IPR010664 Lipopolysaccharide assembly, LptC-related CDA09_05090 831d4ab25e3797cbd51d83a01e4ee64e 685 SUPERFAMILY SSF55486 1 681 7.33E-196 T 01-11-2018 CDA09_05090 831d4ab25e3797cbd51d83a01e4ee64e 685 Gene3D G3DSA:1.10.1370.40 13 680 3.0E-255 T 01-11-2018 CDA09_05090 831d4ab25e3797cbd51d83a01e4ee64e 685 Gene3D G3DSA:1.10.1370.10 140 609 3.0E-255 T 01-11-2018 IPR024077 Neurolysin/Thimet oligopeptidase, domain 2 CDA09_05090 831d4ab25e3797cbd51d83a01e4ee64e 685 Pfam PF01432 Peptidase family M3 222 681 1.5E-135 T 01-11-2018 IPR001567 Peptidase M3A/M3B catalytic domain GO:0004222|GO:0006508 CDA09_08185 0ee82f85de5cec399d82246e14f32a83 114 Gene3D G3DSA:3.10.580.10 2 98 6.7E-18 T 01-11-2018 CDA09_08185 0ee82f85de5cec399d82246e14f32a83 114 Pfam PF00571 CBS domain 7 56 2.6E-11 T 01-11-2018 IPR000644 CBS domain CDA09_08185 0ee82f85de5cec399d82246e14f32a83 114 SMART SM00116 13 61 5.5E-6 T 01-11-2018 IPR000644 CBS domain CDA09_08185 0ee82f85de5cec399d82246e14f32a83 114 SUPERFAMILY SSF54631 1 91 4.19E-17 T 01-11-2018 CDA09_19655 2d29ea4e0b5ce4b3c646130659872943 296 Gene3D G3DSA:1.20.1530.20 158 296 3.3E-5 T 01-11-2018 IPR038770 Sodium/solute symporter superfamily CDA09_19655 2d29ea4e0b5ce4b3c646130659872943 296 Pfam PF03547 Membrane transport protein 150 293 1.5E-12 T 01-11-2018 IPR004776 Membrane transport protein GO:0016021|GO:0055085 CDA09_10690 afc967ee3704c1fc19df7d35d5c76425 209 TIGRFAM TIGR00778 ahpD_dom: alkylhydroperoxidase AhpD family core domain 64 107 1.8E-10 T 01-11-2018 IPR004675 Alkylhydroperoxidase AhpD core GO:0051920|GO:0055114 KEGG: 00480+1.11.1.15 CDA09_10690 afc967ee3704c1fc19df7d35d5c76425 209 Gene3D G3DSA:1.20.1290.10 36 178 3.5E-39 T 01-11-2018 IPR029032 AhpD-like Reactome: R-HSA-5628897 CDA09_10690 afc967ee3704c1fc19df7d35d5c76425 209 Pfam PF02627 Carboxymuconolactone decarboxylase family 44 128 2.8E-15 T 01-11-2018 IPR003779 Carboxymuconolactone decarboxylase-like GO:0051920|GO:0055114 KEGG: 00480+1.11.1.15 CDA09_10690 afc967ee3704c1fc19df7d35d5c76425 209 SUPERFAMILY SSF69118 4 181 2.75E-46 T 01-11-2018 IPR029032 AhpD-like Reactome: R-HSA-5628897 CDA09_15070 92c1ee8ca4134d82ea7d768c15072eb6 241 PIRSF PIRSF003073 1 241 1.5E-71 T 01-11-2018 IPR028350 DNA replication protein DnaC/insertion sequence putative ATP-binding protein CDA09_15070 92c1ee8ca4134d82ea7d768c15072eb6 241 SMART SM00382 95 232 1.7E-8 T 01-11-2018 IPR003593 AAA+ ATPase domain CDA09_15070 92c1ee8ca4134d82ea7d768c15072eb6 241 SUPERFAMILY SSF52540 92 228 2.64E-21 T 01-11-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CDA09_15070 92c1ee8ca4134d82ea7d768c15072eb6 241 Gene3D G3DSA:3.40.50.300 59 241 1.9E-42 T 01-11-2018 CDA09_15070 92c1ee8ca4134d82ea7d768c15072eb6 241 Pfam PF01695 IstB-like ATP binding protein 52 228 3.0E-61 T 01-11-2018 IPR002611 IstB-like ATP-binding protein GO:0005524 CDA09_10265 c79ee89b8860571fcd8107bdfda2e84f 517 Pfam PF02332 Methane/Phenol/Toluene Hydroxylase 25 253 2.7E-75 T 01-11-2018 IPR003430 Methane/phenol/toluene hydroxylase GO:0006725|GO:0055114 CDA09_10265 c79ee89b8860571fcd8107bdfda2e84f 517 SUPERFAMILY SSF47240 5 515 9.36E-168 T 01-11-2018 IPR009078 Ferritin-like superfamily CDA09_10265 c79ee89b8860571fcd8107bdfda2e84f 517 Gene3D G3DSA:1.10.620.20 3 517 3.9E-217 T 01-11-2018 IPR012348 Ribonucleotide reductase-like GO:0016491|GO:0055114 Reactome: R-HSA-499943 CDA09_10265 c79ee89b8860571fcd8107bdfda2e84f 517 Pfam PF04945 YHS domain 411 453 6.3E-17 T 01-11-2018 IPR007029 YHS domain CDA09_06040 d12bc4c4512787981100c0c0017e2d19 312 Pfam PF02470 MlaD protein 38 114 2.4E-13 T 01-11-2018 IPR003399 Mce/MlaD CDA09_04880 b0d1ad69fe2ad09c7ccc1ed2d86949a0 204 Pfam PF13338 Transcriptional regulator, AbiEi antitoxin 17 57 1.1E-5 T 01-11-2018 IPR025159 Transcriptional regulator, AbiEi antitoxin CDA09_16770 0a2f0863870be3ac5a88ba0d31a4f5d9 131 Pfam PF09864 Membrane-bound lysozyme-inhibitor of c-type lysozyme 54 93 2.0E-5 T 01-11-2018 IPR018660 C-type lysozyme inhibitor CDA09_12845 84a821028a3ffee2ac69a4cf7d5706b3 237 ProSitePatterns PS01295 4-diphosphocytidyl-2C-methyl-D-erythritol synthase signature. 111 118 - T 01-11-2018 IPR018294 4-diphosphocytidyl-2C-methyl-D-erythritol synthase, conserved site GO:0003824|GO:0008299 KEGG: 00900+2.7.7.60|MetaCyc: PWY-7560 CDA09_12845 84a821028a3ffee2ac69a4cf7d5706b3 237 Gene3D G3DSA:3.90.550.10 5 235 6.3E-74 T 01-11-2018 IPR029044 Nucleotide-diphospho-sugar transferases CDA09_12845 84a821028a3ffee2ac69a4cf7d5706b3 237 TIGRFAM TIGR00453 ispD: 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase 13 230 4.9E-70 T 01-11-2018 IPR001228 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase GO:0008299|GO:0050518 KEGG: 00900+2.7.7.60|MetaCyc: PWY-7560 CDA09_12845 84a821028a3ffee2ac69a4cf7d5706b3 237 Pfam PF01128 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase 13 232 2.1E-69 T 01-11-2018 IPR034683 Cytidylyltransferase IspD/TarI GO:0070567 KEGG: 00900+2.7.7.60|MetaCyc: PWY-7560 CDA09_12845 84a821028a3ffee2ac69a4cf7d5706b3 237 Hamap MF_00108 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase [ispD]. 10 231 41.9 T 01-11-2018 IPR001228 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase GO:0008299|GO:0050518 KEGG: 00900+2.7.7.60|MetaCyc: PWY-7560 CDA09_12845 84a821028a3ffee2ac69a4cf7d5706b3 237 SUPERFAMILY SSF53448 12 232 1.97E-59 T 01-11-2018 IPR029044 Nucleotide-diphospho-sugar transferases CDA09_05270 8cd23b331e4297f9b2dc92fca48b7d0b 158 PRINTS PR01594 Bacterial protein-transport SecB chaperone protein signature 76 96 3.5E-32 T 01-11-2018 IPR003708 Bacterial protein export chaperone SecB GO:0015031|GO:0051082|GO:0051262 CDA09_05270 8cd23b331e4297f9b2dc92fca48b7d0b 158 PRINTS PR01594 Bacterial protein-transport SecB chaperone protein signature 100 122 3.5E-32 T 01-11-2018 IPR003708 Bacterial protein export chaperone SecB GO:0015031|GO:0051082|GO:0051262 CDA09_05270 8cd23b331e4297f9b2dc92fca48b7d0b 158 PRINTS PR01594 Bacterial protein-transport SecB chaperone protein signature 126 144 3.5E-32 T 01-11-2018 IPR003708 Bacterial protein export chaperone SecB GO:0015031|GO:0051082|GO:0051262 CDA09_05270 8cd23b331e4297f9b2dc92fca48b7d0b 158 PRINTS PR01594 Bacterial protein-transport SecB chaperone protein signature 15 32 3.5E-32 T 01-11-2018 IPR003708 Bacterial protein export chaperone SecB GO:0015031|GO:0051082|GO:0051262 CDA09_05270 8cd23b331e4297f9b2dc92fca48b7d0b 158 SUPERFAMILY SSF54611 5 145 1.02E-51 T 01-11-2018 IPR035958 SecB-like superfamily CDA09_05270 8cd23b331e4297f9b2dc92fca48b7d0b 158 Pfam PF02556 Preprotein translocase subunit SecB 7 146 6.6E-57 T 01-11-2018 IPR003708 Bacterial protein export chaperone SecB GO:0015031|GO:0051082|GO:0051262 CDA09_05270 8cd23b331e4297f9b2dc92fca48b7d0b 158 Hamap MF_00821 Protein-export protein SecB [secB]. 1 148 33.168 T 01-11-2018 IPR003708 Bacterial protein export chaperone SecB GO:0015031|GO:0051082|GO:0051262 CDA09_05270 8cd23b331e4297f9b2dc92fca48b7d0b 158 Gene3D G3DSA:3.10.420.10 1 154 7.5E-58 T 01-11-2018 IPR035958 SecB-like superfamily CDA09_05270 8cd23b331e4297f9b2dc92fca48b7d0b 158 TIGRFAM TIGR00809 secB: protein-export chaperone SecB 9 148 4.9E-54 T 01-11-2018 IPR003708 Bacterial protein export chaperone SecB GO:0015031|GO:0051082|GO:0051262 CDA09_06250 139f88bb8b654f8fd63a932419541038 315 Hamap MF_00185 tRNA dimethylallyltransferase [miaA]. 5 313 29.348 T 01-11-2018 IPR018022 IPP transferase GO:0008033 KEGG: 00908+2.5.1.75|MetaCyc: PWY-2781|Reactome: R-HSA-6782315|Reactome: R-HSA-6787450 CDA09_06250 139f88bb8b654f8fd63a932419541038 315 Gene3D G3DSA:1.10.20.140 112 184 1.1E-96 T 01-11-2018 CDA09_06250 139f88bb8b654f8fd63a932419541038 315 Gene3D G3DSA:3.40.50.300 9 284 1.1E-96 T 01-11-2018 CDA09_06250 139f88bb8b654f8fd63a932419541038 315 Pfam PF01715 IPP transferase 39 282 2.9E-86 T 01-11-2018 IPR018022 IPP transferase GO:0008033 KEGG: 00908+2.5.1.75|MetaCyc: PWY-2781|Reactome: R-HSA-6782315|Reactome: R-HSA-6787450 CDA09_06250 139f88bb8b654f8fd63a932419541038 315 SUPERFAMILY SSF52540 7 150 1.23E-19 T 01-11-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CDA09_06250 139f88bb8b654f8fd63a932419541038 315 TIGRFAM TIGR00174 miaA: tRNA dimethylallyltransferase 6 283 1.4E-92 T 01-11-2018 IPR018022 IPP transferase GO:0008033 KEGG: 00908+2.5.1.75|MetaCyc: PWY-2781|Reactome: R-HSA-6782315|Reactome: R-HSA-6787450 CDA09_13625 fce337ff4cb3388c6e2da00b48a42d0a 266 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 13 250 1.3E-56 T 01-11-2018 CDA09_13625 fce337ff4cb3388c6e2da00b48a42d0a 266 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 82 93 3.8E-28 T 01-11-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CDA09_13625 fce337ff4cb3388c6e2da00b48a42d0a 266 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 130 146 3.8E-28 T 01-11-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CDA09_13625 fce337ff4cb3388c6e2da00b48a42d0a 266 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 156 175 3.8E-28 T 01-11-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CDA09_13625 fce337ff4cb3388c6e2da00b48a42d0a 266 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 212 232 3.8E-28 T 01-11-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CDA09_13625 fce337ff4cb3388c6e2da00b48a42d0a 266 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 8 25 3.8E-28 T 01-11-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CDA09_13625 fce337ff4cb3388c6e2da00b48a42d0a 266 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 177 194 3.8E-28 T 01-11-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CDA09_13625 fce337ff4cb3388c6e2da00b48a42d0a 266 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 156 175 2.9E-9 T 01-11-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CDA09_13625 fce337ff4cb3388c6e2da00b48a42d0a 266 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 82 93 2.9E-9 T 01-11-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CDA09_13625 fce337ff4cb3388c6e2da00b48a42d0a 266 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 136 144 2.9E-9 T 01-11-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CDA09_13625 fce337ff4cb3388c6e2da00b48a42d0a 266 Gene3D G3DSA:3.40.50.720 1 266 3.0E-82 T 01-11-2018 CDA09_13625 fce337ff4cb3388c6e2da00b48a42d0a 266 SUPERFAMILY SSF51735 5 251 5.37E-74 T 01-11-2018 IPR036291 NAD(P)-binding domain superfamily CDA09_13625 fce337ff4cb3388c6e2da00b48a42d0a 266 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 143 171 - T 01-11-2018 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 CDA09_03210 be23b4bb58c94a7cda29c35a125b5e1d 143 Pfam PF02152 Dihydroneopterin aldolase 7 113 2.6E-7 T 01-11-2018 IPR006157 Dihydroneopterin aldolase/epimerase domain GO:0004150|GO:0006760 KEGG: 00790+4.1.2.25|MetaCyc: PWY-6147|MetaCyc: PWY-6148|MetaCyc: PWY-6797|MetaCyc: PWY-7539 CDA09_03210 be23b4bb58c94a7cda29c35a125b5e1d 143 SUPERFAMILY SSF55620 5 118 8.89E-10 T 01-11-2018 CDA09_03210 be23b4bb58c94a7cda29c35a125b5e1d 143 Gene3D G3DSA:3.30.1130.10 3 122 4.8E-15 T 01-11-2018 CDA09_03210 be23b4bb58c94a7cda29c35a125b5e1d 143 SMART SM00905 7 116 3.1E-4 T 01-11-2018 IPR006157 Dihydroneopterin aldolase/epimerase domain GO:0004150|GO:0006760 KEGG: 00790+4.1.2.25|MetaCyc: PWY-6147|MetaCyc: PWY-6148|MetaCyc: PWY-6797|MetaCyc: PWY-7539 CDA09_08460 50e58e5060430f6204724053e7b59d17 279 SUPERFAMILY SSF159713 43 253 1.2E-37 T 01-11-2018 CDA09_08460 50e58e5060430f6204724053e7b59d17 279 Pfam PF04016 Putative heavy-metal chelation 131 264 3.6E-25 T 01-11-2018 IPR007161 Putative heavy-metal chelation domain CDA09_08460 50e58e5060430f6204724053e7b59d17 279 Pfam PF13938 Putative heavy-metal chelation 44 106 1.3E-5 T 01-11-2018 IPR025251 Domain of unknown function DUF4213 CDA09_08460 50e58e5060430f6204724053e7b59d17 279 Gene3D G3DSA:3.40.50.11590 128 243 3.0E-19 T 01-11-2018 CDA09_04625 739d98073f9ae9448110285c8d0055af 197 PRINTS PR00162 Rieske 2Fe-2S subunit signature 119 130 4.3E-6 T 01-11-2018 IPR005805 Rieske iron-sulphur protein, C-terminal GO:0016020|GO:0055114 CDA09_04625 739d98073f9ae9448110285c8d0055af 197 PRINTS PR00162 Rieske 2Fe-2S subunit signature 151 163 4.3E-6 T 01-11-2018 IPR005805 Rieske iron-sulphur protein, C-terminal GO:0016020|GO:0055114 CDA09_04625 739d98073f9ae9448110285c8d0055af 197 Pfam PF10399 Ubiquitinol-cytochrome C reductase Fe-S subunit TAT signal 2 40 8.1E-9 T 01-11-2018 IPR019470 Ubiquitinol-cytochrome C reductase, Fe-S subunit, TAT signal GO:0008121|GO:0055114 KEGG: 00190+1.10.2.2|MetaCyc: PWY-3781|MetaCyc: PWY-6692|MetaCyc: PWY-7082|MetaCyc: PWY-7279 CDA09_04625 739d98073f9ae9448110285c8d0055af 197 TIGRFAM TIGR01416 Rieske_proteo: ubiquinol-cytochrome c reductase, iron-sulfur subunit 11 192 9.2E-67 T 01-11-2018 IPR006317 Ubiquinol-cytochrome c reductase, iron-sulphur subunit GO:0008121|GO:0055114 KEGG: 00190+1.10.2.2|MetaCyc: PWY-3781|MetaCyc: PWY-6692|MetaCyc: PWY-7082|MetaCyc: PWY-7279 CDA09_04625 739d98073f9ae9448110285c8d0055af 197 Pfam PF00355 Rieske [2Fe-2S] domain 57 179 5.7E-12 T 01-11-2018 IPR017941 Rieske [2Fe-2S] iron-sulphur domain GO:0016491|GO:0051537|GO:0055114 CDA09_04625 739d98073f9ae9448110285c8d0055af 197 Gene3D G3DSA:2.102.10.10 43 192 6.3E-49 T 01-11-2018 IPR036922 Rieske [2Fe-2S] iron-sulphur domain superfamily GO:0016491|GO:0051537|GO:0055114 CDA09_04625 739d98073f9ae9448110285c8d0055af 197 SUPERFAMILY SSF50022 30 191 3.12E-42 T 01-11-2018 IPR036922 Rieske [2Fe-2S] iron-sulphur domain superfamily GO:0016491|GO:0051537|GO:0055114 CDA09_14035 735831b508c844f977bd303e00869194 257 Pfam PF11444 Protein of unknown function (DUF2895) 7 207 1.1E-71 T 01-11-2018 IPR021548 Protein of unknown function DUF2895 CDA09_14035 735831b508c844f977bd303e00869194 257 TIGRFAM TIGR03746 conj_TIGR03746: integrating conjugative element protein, PFL_4703 family 5 208 2.8E-76 T 01-11-2018 IPR021548 Protein of unknown function DUF2895 CDA09_14310 4093dd4647c601120ade9f5e4d9877d0 197 SUPERFAMILY SSF46785 5 82 2.21E-17 T 01-11-2018 IPR036390 Winged helix DNA-binding domain superfamily CDA09_14310 4093dd4647c601120ade9f5e4d9877d0 197 Gene3D G3DSA:1.10.10.10 83 181 2.5E-33 T 01-11-2018 IPR036388 Winged helix-like DNA-binding domain superfamily CDA09_14310 4093dd4647c601120ade9f5e4d9877d0 197 Gene3D G3DSA:1.10.10.10 4 82 2.0E-12 T 01-11-2018 IPR036388 Winged helix-like DNA-binding domain superfamily CDA09_14310 4093dd4647c601120ade9f5e4d9877d0 197 SUPERFAMILY SSF46785 86 161 6.28E-24 T 01-11-2018 IPR036390 Winged helix DNA-binding domain superfamily CDA09_14310 4093dd4647c601120ade9f5e4d9877d0 197 Pfam PF04079 Segregation and condensation complex subunit ScpB 12 169 8.1E-48 T 01-11-2018 IPR005234 Chromosome segregation/condensation protein ScpB GO:0051304 CDA09_14310 4093dd4647c601120ade9f5e4d9877d0 197 PIRSF PIRSF019345 1 197 3.1E-55 T 01-11-2018 IPR005234 Chromosome segregation/condensation protein ScpB GO:0051304 CDA09_14310 4093dd4647c601120ade9f5e4d9877d0 197 TIGRFAM TIGR00281 TIGR00281: segregation and condensation protein B 11 173 1.7E-29 T 01-11-2018 IPR005234 Chromosome segregation/condensation protein ScpB GO:0051304 CDA09_01415 671dc749a34283c4bc2cef18b2fb943a 270 Pfam PF01578 Cytochrome C assembly protein 69 264 5.3E-28 T 01-11-2018 IPR002541 Cytochrome c assembly protein GO:0017004|GO:0020037 CDA09_16315 98c2b63510aa8e2eb3caf01b80a36c55 144 Gene3D G3DSA:3.30.1490.190 86 142 3.2E-20 T 01-11-2018 CDA09_16315 98c2b63510aa8e2eb3caf01b80a36c55 144 SUPERFAMILY SSF46785 6 133 6.36E-40 T 01-11-2018 IPR036390 Winged helix DNA-binding domain superfamily CDA09_16315 98c2b63510aa8e2eb3caf01b80a36c55 144 Gene3D G3DSA:1.10.10.10 1 84 4.0E-30 T 01-11-2018 IPR036388 Winged helix-like DNA-binding domain superfamily CDA09_16315 98c2b63510aa8e2eb3caf01b80a36c55 144 Pfam PF01475 Ferric uptake regulator family 11 130 4.1E-44 T 01-11-2018 IPR002481 Ferric-uptake regulator GO:0003700|GO:0006355 CDA09_00320 6a3752d0ff787a93c791d3545265a7d9 155 Pfam PF11749 Protein of unknown function (DUF3305) 6 143 9.1E-51 T 01-11-2018 IPR021736 Protein of unknown function DUF3305 CDA09_02020 7e11c87ab39131df554f506c1235adc6 348 Pfam PF01136 Peptidase family U32 94 345 3.5E-66 T 01-11-2018 IPR001539 Peptidase U32 GO:0006508|GO:0008233 CDA09_05975 a01da0b6bb66e670f68e6c3f31929f7d 581 PRINTS PR01210 Gamma-glutamyltranspeptidase signature 295 314 1.5E-71 T 01-11-2018 CDA09_05975 a01da0b6bb66e670f68e6c3f31929f7d 581 PRINTS PR01210 Gamma-glutamyltranspeptidase signature 459 474 1.5E-71 T 01-11-2018 CDA09_05975 a01da0b6bb66e670f68e6c3f31929f7d 581 PRINTS PR01210 Gamma-glutamyltranspeptidase signature 147 165 1.5E-71 T 01-11-2018 CDA09_05975 a01da0b6bb66e670f68e6c3f31929f7d 581 PRINTS PR01210 Gamma-glutamyltranspeptidase signature 401 419 1.5E-71 T 01-11-2018 CDA09_05975 a01da0b6bb66e670f68e6c3f31929f7d 581 PRINTS PR01210 Gamma-glutamyltranspeptidase signature 72 97 1.5E-71 T 01-11-2018 CDA09_05975 a01da0b6bb66e670f68e6c3f31929f7d 581 PRINTS PR01210 Gamma-glutamyltranspeptidase signature 484 501 1.5E-71 T 01-11-2018 CDA09_05975 a01da0b6bb66e670f68e6c3f31929f7d 581 PRINTS PR01210 Gamma-glutamyltranspeptidase signature 265 281 1.5E-71 T 01-11-2018 CDA09_05975 a01da0b6bb66e670f68e6c3f31929f7d 581 PRINTS PR01210 Gamma-glutamyltranspeptidase signature 423 441 1.5E-71 T 01-11-2018 CDA09_05975 a01da0b6bb66e670f68e6c3f31929f7d 581 PRINTS PR01210 Gamma-glutamyltranspeptidase signature 165 184 1.5E-71 T 01-11-2018 CDA09_05975 a01da0b6bb66e670f68e6c3f31929f7d 581 Pfam PF01019 Gamma-glutamyltranspeptidase 65 576 3.5E-146 T 01-11-2018 CDA09_05975 a01da0b6bb66e670f68e6c3f31929f7d 581 Gene3D G3DSA:3.60.20.40 401 581 2.3E-51 T 01-11-2018 CDA09_05975 a01da0b6bb66e670f68e6c3f31929f7d 581 TIGRFAM TIGR00066 g_glut_trans: gamma-glutamyltransferase 51 573 7.0E-110 T 01-11-2018 IPR000101 Gamma-glutamyltranspeptidase GO:0006751|GO:0036374 KEGG: 00430+2.3.2.2|KEGG: 00460+2.3.2.2|KEGG: 00480+2.3.2.2+3.4.19.13|MetaCyc: PWY-4041|MetaCyc: PWY-4061|MetaCyc: PWY-5826|MetaCyc: PWY-6842|MetaCyc: PWY-7112|MetaCyc: PWY-7559 CDA09_05975 a01da0b6bb66e670f68e6c3f31929f7d 581 Gene3D G3DSA:1.10.246.130 281 400 5.1E-36 T 01-11-2018 CDA09_05975 a01da0b6bb66e670f68e6c3f31929f7d 581 SUPERFAMILY SSF56235 40 581 4.85E-160 T 01-11-2018 IPR029055 Nucleophile aminohydrolases, N-terminal CDA09_08790 a874a824d1ace351a8e4276982b85cf4 396 Pfam PF02803 Thiolase, C-terminal domain 274 395 4.8E-34 T 01-11-2018 IPR020617 Thiolase, C-terminal GO:0016747 CDA09_08790 a874a824d1ace351a8e4276982b85cf4 396 Gene3D G3DSA:3.40.47.10 132 393 8.0E-126 T 01-11-2018 IPR016039 Thiolase-like GO:0003824 CDA09_08790 a874a824d1ace351a8e4276982b85cf4 396 Pfam PF00108 Thiolase, N-terminal domain 10 263 2.4E-66 T 01-11-2018 IPR020616 Thiolase, N-terminal GO:0016747 CDA09_08790 a874a824d1ace351a8e4276982b85cf4 396 PIRSF PIRSF000429 4 396 7.9E-106 T 01-11-2018 IPR002155 Thiolase GO:0016747 CDA09_08790 a874a824d1ace351a8e4276982b85cf4 396 ProSitePatterns PS00737 Thiolases signature 2. 342 358 - T 01-11-2018 IPR020613 Thiolase, conserved site GO:0016747 CDA09_08790 a874a824d1ace351a8e4276982b85cf4 396 SUPERFAMILY SSF53901 274 395 1.32E-34 T 01-11-2018 IPR016039 Thiolase-like GO:0003824 CDA09_08790 a874a824d1ace351a8e4276982b85cf4 396 TIGRFAM TIGR01930 AcCoA-C-Actrans: acetyl-CoA C-acyltransferase 11 394 1.8E-114 T 01-11-2018 IPR002155 Thiolase GO:0016747 CDA09_08790 a874a824d1ace351a8e4276982b85cf4 396 Gene3D G3DSA:3.40.47.10 11 279 8.0E-126 T 01-11-2018 IPR016039 Thiolase-like GO:0003824 CDA09_08790 a874a824d1ace351a8e4276982b85cf4 396 SUPERFAMILY SSF53901 9 273 1.05E-66 T 01-11-2018 IPR016039 Thiolase-like GO:0003824 CDA09_20350 c619f64d2782a0b2f75e66b04afa46a6 358 Gene3D G3DSA:3.30.1490.300 91 150 4.8E-88 T 01-11-2018 CDA09_20350 c619f64d2782a0b2f75e66b04afa46a6 358 SMART SM00842 14 181 1.3E-5 T 01-11-2018 IPR003494 SHS2 domain inserted in FtsA GO:0005515|GO:0051301 CDA09_20350 c619f64d2782a0b2f75e66b04afa46a6 358 SUPERFAMILY SSF53067 13 179 1.2E-14 T 01-11-2018 CDA09_20350 c619f64d2782a0b2f75e66b04afa46a6 358 Gene3D G3DSA:3.30.420.40 193 320 4.8E-88 T 01-11-2018 CDA09_20350 c619f64d2782a0b2f75e66b04afa46a6 358 PIRSF PIRSF019169 4 357 5.1E-130 T 01-11-2018 IPR005883 Type IV pilus assembly protein PilM CDA09_20350 c619f64d2782a0b2f75e66b04afa46a6 358 Pfam PF11104 Type IV pilus assembly protein PilM; 16 356 4.6E-148 T 01-11-2018 IPR005883 Type IV pilus assembly protein PilM CDA09_20350 c619f64d2782a0b2f75e66b04afa46a6 358 SUPERFAMILY SSF53067 194 354 4.82E-27 T 01-11-2018 CDA09_20350 c619f64d2782a0b2f75e66b04afa46a6 358 TIGRFAM TIGR01175 pilM: type IV pilus assembly protein PilM 13 356 1.3E-103 T 01-11-2018 IPR005883 Type IV pilus assembly protein PilM CDA09_20350 c619f64d2782a0b2f75e66b04afa46a6 358 Gene3D G3DSA:3.30.420.40 15 354 4.8E-88 T 01-11-2018 CDA09_11140 bd2fc3a47791c5320d9e50b548052675 323 SUPERFAMILY SSF51556 7 321 1.18E-83 T 01-11-2018 IPR032466 Metal-dependent hydrolase CDA09_11140 bd2fc3a47791c5320d9e50b548052675 323 Pfam PF01244 Membrane dipeptidase (Peptidase family M19) 18 318 1.0E-92 T 01-11-2018 IPR008257 Peptidase M19 GO:0006508|GO:0016805 MetaCyc: PWY-7533|Reactome: R-HSA-2142691|Reactome: R-HSA-5423646 CDA09_11140 bd2fc3a47791c5320d9e50b548052675 323 Gene3D G3DSA:3.20.20.140 1 323 5.2E-123 T 01-11-2018 CDA09_02485 66a84fa9a1757201a18cc7b09a59f7f8 227 Pfam PF01467 Cytidylyltransferase-like 13 197 6.6E-28 T 01-11-2018 IPR004821 Cytidyltransferase-like domain GO:0003824|GO:0009058 CDA09_02485 66a84fa9a1757201a18cc7b09a59f7f8 227 TIGRFAM TIGR00482 TIGR00482: nicotinate (nicotinamide) nucleotide adenylyltransferase 13 224 5.8E-46 T 01-11-2018 IPR005248 Nicotinate/nicotinamide nucleotide adenylyltransferase GO:0009435|GO:0016779 KEGG: 00760+2.7.7.18|MetaCyc: PWY-5381|MetaCyc: PWY-5653|MetaCyc: PWY-7761|Reactome: R-HSA-196807 CDA09_02485 66a84fa9a1757201a18cc7b09a59f7f8 227 SUPERFAMILY SSF52374 11 226 2.34E-53 T 01-11-2018 CDA09_02485 66a84fa9a1757201a18cc7b09a59f7f8 227 Hamap MF_00244 Probable nicotinate-nucleotide adenylyltransferase [nadD]. 9 225 29.092 T 01-11-2018 IPR005248 Nicotinate/nicotinamide nucleotide adenylyltransferase GO:0009435|GO:0016779 KEGG: 00760+2.7.7.18|MetaCyc: PWY-5381|MetaCyc: PWY-5653|MetaCyc: PWY-7761|Reactome: R-HSA-196807 CDA09_02485 66a84fa9a1757201a18cc7b09a59f7f8 227 Gene3D G3DSA:3.40.50.620 9 225 5.5E-59 T 01-11-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold CDA09_02485 66a84fa9a1757201a18cc7b09a59f7f8 227 TIGRFAM TIGR00125 cyt_tran_rel: cytidyltransferase-like domain 12 73 2.8E-11 T 01-11-2018 IPR004821 Cytidyltransferase-like domain GO:0003824|GO:0009058 CDA09_21120 38b55a80bebaaaa0c2215d1339fbbdf5 74 Pfam PF05433 Glycine zipper 2TM domain 31 69 1.9E-8 T 01-11-2018 IPR008816 Glycine zipper 2TM domain GO:0019867 CDA09_14550 c17697d741f732c9e776f1e6a051630f 635 Gene3D G3DSA:3.50.50.60 243 626 3.0E-121 T 01-11-2018 IPR036188 FAD/NAD(P)-binding domain superfamily CDA09_14550 c17697d741f732c9e776f1e6a051630f 635 Gene3D G3DSA:3.40.50.150 6 237 3.2E-98 T 01-11-2018 CDA09_14550 c17697d741f732c9e776f1e6a051630f 635 Gene3D G3DSA:3.30.9.10 329 547 3.0E-121 T 01-11-2018 CDA09_14550 c17697d741f732c9e776f1e6a051630f 635 Hamap MF_01102 tRNA 5-methylaminomethyl-2-thiouridine biosynthesis bifunctional protein MnmC [mnmC]. 4 626 26.151 T 01-11-2018 IPR023032 tRNA 5-methylaminomethyl-2-thiouridine biosynthesis bifunctional protein MnmC GO:0004808|GO:0008033|GO:0008168|GO:0016645|GO:0055114 MetaCyc: PWY-7892 CDA09_14550 c17697d741f732c9e776f1e6a051630f 635 TIGRFAM TIGR03197 MnmC_Cterm: tRNA U-34 5-methylaminomethyl-2-thiouridine biosynthesis protein MnmC, C-terminal domain 244 628 1.3E-122 T 01-11-2018 IPR017610 tRNA U-34 5-methylaminomethyl-2-thiouridine biosynthesis protein MnmC, C-terminal GO:0008168|GO:0016645|GO:0055114 MetaCyc: PWY-7892 CDA09_14550 c17697d741f732c9e776f1e6a051630f 635 Pfam PF01266 FAD dependent oxidoreductase 244 601 7.8E-44 T 01-11-2018 IPR006076 FAD dependent oxidoreductase GO:0016491|GO:0055114 CDA09_14550 c17697d741f732c9e776f1e6a051630f 635 SUPERFAMILY SSF51905 245 523 9.71E-33 T 01-11-2018 IPR036188 FAD/NAD(P)-binding domain superfamily CDA09_14550 c17697d741f732c9e776f1e6a051630f 635 Pfam PF05430 S-adenosyl-L-methionine-dependent methyltransferase 110 229 1.5E-37 T 01-11-2018 IPR008471 MnmC-like methyltransferase GO:0016645|GO:0055114 MetaCyc: PWY-7892 CDA09_03550 e0f5f9551f8a6764481c7db02e6e3e09 305 Pfam PF03466 LysR substrate binding domain 90 289 1.9E-44 T 01-11-2018 IPR005119 LysR, substrate-binding CDA09_03550 e0f5f9551f8a6764481c7db02e6e3e09 305 SUPERFAMILY SSF46785 4 112 1.32E-18 T 01-11-2018 IPR036390 Winged helix DNA-binding domain superfamily CDA09_03550 e0f5f9551f8a6764481c7db02e6e3e09 305 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 4 62 1.4E-14 T 01-11-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 CDA09_03550 e0f5f9551f8a6764481c7db02e6e3e09 305 Gene3D G3DSA:1.10.10.10 3 86 2.0E-23 T 01-11-2018 IPR036388 Winged helix-like DNA-binding domain superfamily CDA09_03550 e0f5f9551f8a6764481c7db02e6e3e09 305 SUPERFAMILY SSF53850 91 293 3.8E-48 T 01-11-2018 CDA09_03550 e0f5f9551f8a6764481c7db02e6e3e09 305 Gene3D G3DSA:3.40.190.290 91 290 1.2E-68 T 01-11-2018 CDA09_04875 de9d1cc13c9677ee97e0f75861255ee0 84 Gene3D G3DSA:3.40.1620.10 1 39 4.0E-15 T 01-11-2018 CDA09_04875 de9d1cc13c9677ee97e0f75861255ee0 84 Pfam PF02604 Antitoxin Phd_YefM, type II toxin-antitoxin system 1 42 2.0E-14 T 01-11-2018 IPR006442 Type II toxin-antitoxin system, antitoxin Phd/YefM CDA09_04875 de9d1cc13c9677ee97e0f75861255ee0 84 TIGRFAM TIGR01552 phd_fam: prevent-host-death family protein 3 43 8.9E-14 T 01-11-2018 CDA09_04875 de9d1cc13c9677ee97e0f75861255ee0 84 SUPERFAMILY SSF143120 1 45 2.75E-12 T 01-11-2018 IPR036165 YefM-like superfamily CDA09_21785 b067ea393433b9808dacdcc741b2f7b8 355 SUPERFAMILY SSF50129 11 178 1.89E-34 T 01-11-2018 IPR011032 GroES-like superfamily CDA09_21785 b067ea393433b9808dacdcc741b2f7b8 355 Gene3D G3DSA:3.40.50.720 156 302 2.9E-76 T 01-11-2018 CDA09_21785 b067ea393433b9808dacdcc741b2f7b8 355 TIGRFAM TIGR03201 dearomat_had: 6-hydroxycyclohex-1-ene-1-carbonyl-CoA dehydrogenase 7 355 8.6E-162 T 01-11-2018 IPR017614 6-hydroxycyclohex-1-ene-1-carbonyl-CoA dehydrogenase KEGG: 00362+1.1.1.368|MetaCyc: PWY-7401 CDA09_21785 b067ea393433b9808dacdcc741b2f7b8 355 SUPERFAMILY SSF51735 146 322 1.43E-27 T 01-11-2018 IPR036291 NAD(P)-binding domain superfamily CDA09_21785 b067ea393433b9808dacdcc741b2f7b8 355 Pfam PF08240 Alcohol dehydrogenase GroES-like domain 29 136 1.8E-28 T 01-11-2018 IPR013154 Alcohol dehydrogenase, N-terminal GO:0055114 CDA09_21785 b067ea393433b9808dacdcc741b2f7b8 355 Gene3D G3DSA:3.90.180.10 9 344 2.9E-76 T 01-11-2018 CDA09_21785 b067ea393433b9808dacdcc741b2f7b8 355 ProSitePatterns PS00059 Zinc-containing alcohol dehydrogenases signature. 64 78 - T 01-11-2018 IPR002328 Alcohol dehydrogenase, zinc-type, conserved site GO:0008270|GO:0016491|GO:0055114 Reactome: R-HSA-71384 CDA09_21785 b067ea393433b9808dacdcc741b2f7b8 355 Pfam PF00107 Zinc-binding dehydrogenase 183 317 2.2E-20 T 01-11-2018 IPR013149 Alcohol dehydrogenase, C-terminal GO:0055114 CDA09_09245 6ec46c9e1ca0102f0e8cda2b12e342b1 471 Pfam PF06050 2-hydroxyglutaryl-CoA dehydratase, D-component 53 436 4.7E-49 T 01-11-2018 IPR010327 FldB/FldC dehydratase alpha/beta subunit CDA09_09245 6ec46c9e1ca0102f0e8cda2b12e342b1 471 Gene3D G3DSA:3.40.50.11900 303 445 5.5E-8 T 01-11-2018 CDA09_18470 c06f8697e5536345333b175500bb2c29 421 Gene3D G3DSA:3.40.50.11720 37 210 3.9E-48 T 01-11-2018 IPR038107 3-deoxy-D-manno-octulosonic-acid transferase, N-terminal domain superfamily KEGG: 00540+2.4.99.12|MetaCyc: PWY-7675 CDA09_18470 c06f8697e5536345333b175500bb2c29 421 Gene3D G3DSA:3.40.50.2000 219 400 1.5E-59 T 01-11-2018 CDA09_18470 c06f8697e5536345333b175500bb2c29 421 Pfam PF04413 3-Deoxy-D-manno-octulosonic-acid transferase (kdotransferase) 35 212 2.1E-63 T 01-11-2018 IPR007507 3-deoxy-D-manno-octulosonic-acid transferase, N-terminal KEGG: 00540+2.4.99.12|MetaCyc: PWY-7675 CDA09_18470 c06f8697e5536345333b175500bb2c29 421 SUPERFAMILY SSF53756 54 416 1.05E-16 T 01-11-2018 CDA09_18470 c06f8697e5536345333b175500bb2c29 421 Pfam PF00534 Glycosyl transferases group 1 262 398 3.4E-6 T 01-11-2018 IPR001296 Glycosyl transferase, family 1 CDA09_00475 41b75ed20d2696185a6c95c0ea7c629a 157 Hamap MF_01398 ATP synthase subunit b [atpF]. 1 138 11.937 T 01-11-2018 IPR002146 ATP synthase, F0 complex, subunit b/b', bacterial/chloroplast GO:0015078|GO:0015986|GO:0045263 CDA09_00475 41b75ed20d2696185a6c95c0ea7c629a 157 Pfam PF00430 ATP synthase B/B' CF(0) 6 136 8.2E-26 T 01-11-2018 IPR002146 ATP synthase, F0 complex, subunit b/b', bacterial/chloroplast GO:0015078|GO:0015986|GO:0045263 CDA09_00475 41b75ed20d2696185a6c95c0ea7c629a 157 TIGRFAM TIGR01144 ATP_synt_b: ATP synthase F0, B subunit 10 155 2.7E-34 T 01-11-2018 IPR005864 ATP synthase, F0 complex, subunit b, bacterial GO:0015078|GO:0015986|GO:0045263 CDA09_08830 bf03493c7c4b23e9592b3543d5e50250 183 Pfam PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily 7 136 1.0E-14 T 01-11-2018 IPR004360 Glyoxalase/fosfomycin resistance/dioxygenase domain CDA09_08830 bf03493c7c4b23e9592b3543d5e50250 183 Gene3D G3DSA:3.10.180.10 2 170 2.9E-32 T 01-11-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase CDA09_08830 bf03493c7c4b23e9592b3543d5e50250 183 SUPERFAMILY SSF54593 5 159 2.69E-34 T 01-11-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase CDA09_12040 9eb702d0a03c959d34269ba0233a2937 206 SUPERFAMILY SSF140478 29 185 2.09E-51 T 01-11-2018 IPR023353 LemA-like domain superfamily CDA09_12040 9eb702d0a03c959d34269ba0233a2937 206 Gene3D G3DSA:1.20.1440.20 23 199 2.5E-57 T 01-11-2018 IPR023353 LemA-like domain superfamily CDA09_12040 9eb702d0a03c959d34269ba0233a2937 206 Pfam PF04011 LemA family 12 199 7.8E-64 T 01-11-2018 IPR007156 LemA CDA09_10290 6c59242f7089e44fc5105393d7b77685 300 Pfam PF13557 Putative MetA-pathway of phenol degradation 68 291 6.4E-34 T 01-11-2018 IPR025737 MetA-pathway of phenol degradation, putative CDA09_11110 8eec0bc6a77a5df206cee79b6d5ee3dc 232 Gene3D G3DSA:1.10.1240.10 4 99 1.8E-22 T 01-11-2018 IPR036594 Methionine synthase domain Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 CDA09_11110 8eec0bc6a77a5df206cee79b6d5ee3dc 232 Pfam PF02607 B12 binding domain 21 93 1.8E-15 T 01-11-2018 IPR003759 Cobalamin (vitamin B12)-binding module, cap domain Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 CDA09_11110 8eec0bc6a77a5df206cee79b6d5ee3dc 232 SUPERFAMILY SSF47644 16 99 1.7E-19 T 01-11-2018 IPR036594 Methionine synthase domain Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 CDA09_11110 8eec0bc6a77a5df206cee79b6d5ee3dc 232 SUPERFAMILY SSF52242 86 229 2.22E-45 T 01-11-2018 IPR036724 Cobalamin-binding domain superfamily GO:0031419|GO:0046872 Reactome: R-HSA-196741 CDA09_11110 8eec0bc6a77a5df206cee79b6d5ee3dc 232 SMART SM01018 18 101 1.3E-24 T 01-11-2018 IPR003759 Cobalamin (vitamin B12)-binding module, cap domain Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 CDA09_11110 8eec0bc6a77a5df206cee79b6d5ee3dc 232 Gene3D G3DSA:3.40.50.280 100 232 2.0E-45 T 01-11-2018 CDA09_11110 8eec0bc6a77a5df206cee79b6d5ee3dc 232 Pfam PF02310 B12 binding domain 107 214 3.5E-25 T 01-11-2018 IPR006158 Cobalamin (vitamin B12)-binding domain GO:0031419|GO:0046872 Reactome: R-HSA-196741 CDA09_18220 ac8c37b8a47e456114893dc36d2a30be 88 TIGRFAM TIGR02209 ftsL_broad: cell division protein FtsL 6 81 8.3E-23 T 01-11-2018 IPR011922 Cell division protein FtsL GO:0016021|GO:0051301 CDA09_18220 ac8c37b8a47e456114893dc36d2a30be 88 Hamap MF_00910 Cell division protein FtsL [ftsL]. 1 88 16.404 T 01-11-2018 IPR011922 Cell division protein FtsL GO:0016021|GO:0051301 CDA09_18220 ac8c37b8a47e456114893dc36d2a30be 88 Pfam PF04999 Cell division protein FtsL 4 81 2.1E-23 T 01-11-2018 IPR011922 Cell division protein FtsL GO:0016021|GO:0051301 CDA09_17870 1de537d98349e5cb30467ddcfe0ca266 216 Gene3D G3DSA:3.90.470.20 107 186 6.4E-6 T 01-11-2018 IPR037143 4'-phosphopantetheinyl transferase domain superfamily GO:0000287|GO:0008897 KEGG: 00770+2.7.8.7|MetaCyc: PWY-6012|MetaCyc: PWY-6012-1|MetaCyc: PWY-6289|Reactome: R-HSA-199220 CDA09_17870 1de537d98349e5cb30467ddcfe0ca266 216 Pfam PF01648 4'-phosphopantetheinyl transferase superfamily 107 172 4.7E-5 T 01-11-2018 IPR008278 4'-phosphopantetheinyl transferase domain GO:0000287|GO:0008897 KEGG: 00770+2.7.8.7|MetaCyc: PWY-6012|MetaCyc: PWY-6012-1|MetaCyc: PWY-6289|Reactome: R-HSA-199220 CDA09_17870 1de537d98349e5cb30467ddcfe0ca266 216 SUPERFAMILY SSF56214 107 170 5.23E-10 T 01-11-2018 IPR037143 4'-phosphopantetheinyl transferase domain superfamily GO:0000287|GO:0008897 KEGG: 00770+2.7.8.7|MetaCyc: PWY-6012|MetaCyc: PWY-6012-1|MetaCyc: PWY-6289|Reactome: R-HSA-199220 CDA09_14095 39443e99c5906c91bf37cd6cdcdd9e09 354 Pfam PF06834 TraU protein 55 339 5.9E-52 T 01-11-2018 IPR009649 TraU CDA09_14095 39443e99c5906c91bf37cd6cdcdd9e09 354 TIGRFAM TIGR03756 conj_TIGR03756: integrating conjugative element protein, PFL_4710 family 50 349 2.5E-95 T 01-11-2018 IPR026331 Integrating conjugative element protein PFL_4710 CDA09_07160 62d953c118dc7087bbc052f75239db92 261 Hamap MF_00652 UPF0246 protein YaaA [yaaA]. 1 259 34.888 T 01-11-2018 IPR005583 Peroxide stress protein YaaA CDA09_07160 62d953c118dc7087bbc052f75239db92 261 Pfam PF03883 Peroxide stress protein YaaA 1 247 2.3E-87 T 01-11-2018 IPR005583 Peroxide stress protein YaaA CDA09_09215 dbc471c968426166b7eb0d5e96cdcd47 514 Pfam PF13193 AMP-binding enzyme C-terminal domain 414 491 3.1E-17 T 01-11-2018 IPR025110 AMP-binding enzyme, C-terminal domain CDA09_09215 dbc471c968426166b7eb0d5e96cdcd47 514 ProSitePatterns PS00455 Putative AMP-binding domain signature. 162 173 - T 01-11-2018 IPR020845 AMP-binding, conserved site CDA09_09215 dbc471c968426166b7eb0d5e96cdcd47 514 SUPERFAMILY SSF56801 4 502 1.96E-147 T 01-11-2018 CDA09_09215 dbc471c968426166b7eb0d5e96cdcd47 514 Pfam PF00501 AMP-binding enzyme 16 405 5.0E-97 T 01-11-2018 IPR000873 AMP-dependent synthetase/ligase GO:0003824 CDA09_09215 dbc471c968426166b7eb0d5e96cdcd47 514 Gene3D G3DSA:3.30.300.310 401 507 9.5E-31 T 01-11-2018 CDA09_09215 dbc471c968426166b7eb0d5e96cdcd47 514 Gene3D G3DSA:3.40.50.12780 8 398 4.4E-132 T 01-11-2018 CDA09_08040 51c81b98d2a24ec6a2e119560b334a09 237 Gene3D G3DSA:3.40.50.300 4 233 1.7E-60 T 01-11-2018 CDA09_08040 51c81b98d2a24ec6a2e119560b334a09 237 SUPERFAMILY SSF52540 4 218 6.07E-57 T 01-11-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CDA09_08040 51c81b98d2a24ec6a2e119560b334a09 237 ProSitePatterns PS00211 ABC transporters family signature. 128 142 - T 01-11-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 CDA09_08040 51c81b98d2a24ec6a2e119560b334a09 237 SMART SM00382 28 215 1.7E-12 T 01-11-2018 IPR003593 AAA+ ATPase domain CDA09_08040 51c81b98d2a24ec6a2e119560b334a09 237 Pfam PF00005 ABC transporter 19 156 1.1E-26 T 01-11-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 CDA09_16405 9f8b52b125ad80facbdb3528dff7d229 232 Pfam PF05036 Sporulation related domain 161 230 1.1E-15 T 01-11-2018 IPR007730 Sporulation-like domain GO:0042834 CDA09_16405 9f8b52b125ad80facbdb3528dff7d229 232 SUPERFAMILY SSF110997 160 230 1.57E-16 T 01-11-2018 IPR036680 Sporulation-like domain superfamily GO:0042834 CDA09_16405 9f8b52b125ad80facbdb3528dff7d229 232 Gene3D G3DSA:3.30.70.1070 163 231 3.6E-13 T 01-11-2018 IPR036680 Sporulation-like domain superfamily GO:0042834 CDA09_10925 c412b2b4c12b81117ccd84fc9f8afcf7 280 Gene3D G3DSA:3.40.190.100 101 213 4.5E-93 T 01-11-2018 CDA09_10925 c412b2b4c12b81117ccd84fc9f8afcf7 280 Gene3D G3DSA:3.40.190.10 20 276 4.5E-93 T 01-11-2018 CDA09_10925 c412b2b4c12b81117ccd84fc9f8afcf7 280 Pfam PF04069 Substrate binding domain of ABC-type glycine betaine transport system 18 263 7.3E-67 T 01-11-2018 IPR007210 ABC-type glycine betaine transport system, substrate-binding domain GO:0022857|GO:0043190|GO:0055085 CDA09_10925 c412b2b4c12b81117ccd84fc9f8afcf7 280 SUPERFAMILY SSF53850 13 278 6.18E-79 T 01-11-2018 CDA09_20975 25677e9a01bc4ec585bf0e3c06824969 127 Pfam PF07332 Putative Actinobacterial Holin-X, holin superfamily III 13 124 2.4E-14 T 01-11-2018 IPR009937 Putative Actinobacterial Holin-X, holin superfamily III CDA09_18005 e27d7f71fd80a34245578e2eb675bac9 256 Pfam PF13672 Protein phosphatase 2C 21 220 6.5E-18 T 01-11-2018 CDA09_18005 e27d7f71fd80a34245578e2eb675bac9 256 SMART SM00332 1 252 5.1E-21 T 01-11-2018 IPR001932 PPM-type phosphatase domain GO:0003824 KEGG: 04658+3.1.3.16|KEGG: 04660+3.1.3.16 CDA09_18005 e27d7f71fd80a34245578e2eb675bac9 256 SMART SM00331 15 254 6.4E-26 T 01-11-2018 IPR001932 PPM-type phosphatase domain GO:0003824 KEGG: 04658+3.1.3.16|KEGG: 04660+3.1.3.16 CDA09_18005 e27d7f71fd80a34245578e2eb675bac9 256 Gene3D G3DSA:3.60.40.10 2 255 1.7E-64 T 01-11-2018 IPR036457 PPM-type phosphatase domain superfamily KEGG: 04658+3.1.3.16|KEGG: 04660+3.1.3.16 CDA09_18005 e27d7f71fd80a34245578e2eb675bac9 256 SUPERFAMILY SSF81606 8 253 8.11E-62 T 01-11-2018 IPR036457 PPM-type phosphatase domain superfamily KEGG: 04658+3.1.3.16|KEGG: 04660+3.1.3.16 CDA09_10720 44c6894fda67a8f5d9e24900b07a47a5 92 Pfam PF00403 Heavy-metal-associated domain 26 86 2.7E-13 T 01-11-2018 IPR006121 Heavy metal-associated domain, HMA GO:0030001|GO:0046872 CDA09_10720 44c6894fda67a8f5d9e24900b07a47a5 92 PRINTS PR00946 Mercury scavenger protein signature 32 48 2.6E-37 T 01-11-2018 IPR001802 Mercuric transport protein periplasmic component/copper chaperone CopZ GO:0046872 CDA09_10720 44c6894fda67a8f5d9e24900b07a47a5 92 PRINTS PR00946 Mercury scavenger protein signature 3 21 2.6E-37 T 01-11-2018 IPR001802 Mercuric transport protein periplasmic component/copper chaperone CopZ GO:0046872 CDA09_10720 44c6894fda67a8f5d9e24900b07a47a5 92 PRINTS PR00946 Mercury scavenger protein signature 63 77 2.6E-37 T 01-11-2018 IPR001802 Mercuric transport protein periplasmic component/copper chaperone CopZ GO:0046872 CDA09_10720 44c6894fda67a8f5d9e24900b07a47a5 92 PRINTS PR00946 Mercury scavenger protein signature 77 91 2.6E-37 T 01-11-2018 IPR001802 Mercuric transport protein periplasmic component/copper chaperone CopZ GO:0046872 CDA09_10720 44c6894fda67a8f5d9e24900b07a47a5 92 PRINTS PR00946 Mercury scavenger protein signature 21 32 2.6E-37 T 01-11-2018 IPR001802 Mercuric transport protein periplasmic component/copper chaperone CopZ GO:0046872 CDA09_10720 44c6894fda67a8f5d9e24900b07a47a5 92 PRINTS PR00946 Mercury scavenger protein signature 48 63 2.6E-37 T 01-11-2018 IPR001802 Mercuric transport protein periplasmic component/copper chaperone CopZ GO:0046872 CDA09_10720 44c6894fda67a8f5d9e24900b07a47a5 92 TIGRFAM TIGR02052 MerP: mercuric transport protein periplasmic component 1 92 9.2E-43 T 01-11-2018 IPR011795 Mercuric transport protein periplasmic component GO:0015097|GO:0015694|GO:0042597|GO:0045340|GO:0046689 CDA09_10720 44c6894fda67a8f5d9e24900b07a47a5 92 ProSitePatterns PS01047 Heavy-metal-associated domain. 29 58 - T 01-11-2018 IPR017969 Heavy-metal-associated, conserved site GO:0030001|GO:0046872 CDA09_10720 44c6894fda67a8f5d9e24900b07a47a5 92 SUPERFAMILY SSF55008 18 90 3.4E-20 T 01-11-2018 IPR036163 Heavy metal-associated domain superfamily GO:0030001|GO:0046872 CDA09_10720 44c6894fda67a8f5d9e24900b07a47a5 92 Gene3D G3DSA:3.30.70.100 22 92 5.6E-20 T 01-11-2018 CDA09_21350 6134439a4b577b5af9890a5756847d35 261 Pfam PF05690 Thiazole biosynthesis protein ThiG 7 254 9.0E-108 T 01-11-2018 IPR033983 Thiazole synthase ThiG KEGG: 00730+2.8.1.10|MetaCyc: PWY-6891|MetaCyc: PWY-6892 CDA09_21350 6134439a4b577b5af9890a5756847d35 261 SUPERFAMILY SSF110399 3 245 1.44E-90 T 01-11-2018 CDA09_21350 6134439a4b577b5af9890a5756847d35 261 Gene3D G3DSA:3.20.20.70 1 260 4.3E-119 T 01-11-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 CDA09_21350 6134439a4b577b5af9890a5756847d35 261 Hamap MF_00443 Thiazole synthase [thiG]. 4 260 42.646 T 01-11-2018 IPR008867 Thiazole synthase GO:0009228 KEGG: 00730+2.8.1.10|MetaCyc: PWY-6891|MetaCyc: PWY-6892 CDA09_21030 bf32615685fd03e1e0590d864cc8f803 495 TIGRFAM TIGR02547 casA_cse1: CRISPR type I-E/ECOLI-associated protein CasA/Cse1 2 491 5.4E-87 T 01-11-2018 IPR013381 CRISPR-associated protein Cse1 CDA09_21030 bf32615685fd03e1e0590d864cc8f803 495 Pfam PF09481 CRISPR-associated protein Cse1 (CRISPR_cse1) 2 455 4.9E-68 T 01-11-2018 IPR013381 CRISPR-associated protein Cse1 CDA09_07600 f56f95f5af82b87fdb97b3e56963954f 251 Pfam PF01925 Sulfite exporter TauE/SafE 8 244 5.7E-42 T 01-11-2018 IPR002781 Transmembrane protein TauE-like GO:0016021 CDA09_00095 45e167f27fe7c914bf52754e66e997c8 163 SUPERFAMILY SSF52218 1 155 1.57E-33 T 01-11-2018 IPR029039 Flavoprotein-like superfamily CDA09_00095 45e167f27fe7c914bf52754e66e997c8 163 Pfam PF03358 NADPH-dependent FMN reductase 46 110 2.8E-8 T 01-11-2018 IPR005025 NADPH-dependent FMN reductase-like GO:0016491 CDA09_00095 45e167f27fe7c914bf52754e66e997c8 163 Gene3D G3DSA:3.40.50.360 1 159 4.6E-25 T 01-11-2018 IPR029039 Flavoprotein-like superfamily CDA09_14420 7d67c694f3d5e54f925c53572a89a2ce 835 Pfam PF12704 MacB-like periplasmic core domain 481 675 4.1E-6 T 01-11-2018 IPR025857 MacB-like periplasmic core domain CDA09_14420 7d67c694f3d5e54f925c53572a89a2ce 835 Pfam PF02687 FtsX-like permease family 283 381 5.1E-9 T 01-11-2018 IPR003838 ABC transporter permease protein domain GO:0016020 CDA09_14420 7d67c694f3d5e54f925c53572a89a2ce 835 Pfam PF02687 FtsX-like permease family 732 824 5.6E-14 T 01-11-2018 IPR003838 ABC transporter permease protein domain GO:0016020 CDA09_02715 8572ed4230b32d3f9e2940ed96c535d6 208 SMART SM00644 34 182 7.8E-51 T 01-11-2018 IPR002502 N-acetylmuramoyl-L-alanine amidase domain GO:0008745|GO:0009253 Reactome: R-HSA-6803157 CDA09_02715 8572ed4230b32d3f9e2940ed96c535d6 208 Pfam PF01510 N-acetylmuramoyl-L-alanine amidase 44 183 1.4E-28 T 01-11-2018 IPR002502 N-acetylmuramoyl-L-alanine amidase domain GO:0008745|GO:0009253 Reactome: R-HSA-6803157 CDA09_02715 8572ed4230b32d3f9e2940ed96c535d6 208 SUPERFAMILY SSF55846 22 193 7.33E-66 T 01-11-2018 IPR036505 N-acetylmuramoyl-L-alanine amidase/PGRP domain superfamily GO:0008745|GO:0009253 Reactome: R-HSA-6803157 CDA09_02715 8572ed4230b32d3f9e2940ed96c535d6 208 Gene3D G3DSA:3.40.80.10 20 196 7.6E-60 T 01-11-2018 IPR036505 N-acetylmuramoyl-L-alanine amidase/PGRP domain superfamily GO:0008745|GO:0009253 Reactome: R-HSA-6803157 CDA09_16280 b6c8e9c2783d6bf1f9028e1d5425fdf4 207 Pfam PF01728 FtsJ-like methyltransferase 28 203 6.2E-56 T 01-11-2018 IPR002877 Ribosomal RNA methyltransferase FtsJ domain GO:0008168|GO:0032259 CDA09_16280 b6c8e9c2783d6bf1f9028e1d5425fdf4 207 Gene3D G3DSA:3.40.50.150 27 206 9.7E-61 T 01-11-2018 CDA09_16280 b6c8e9c2783d6bf1f9028e1d5425fdf4 207 Hamap MF_01547 Ribosomal RNA large subunit methyltransferase E [rlmE]. 12 205 30.851 T 01-11-2018 IPR015507 Ribosomal RNA large subunit methyltransferase E GO:0001510|GO:0008168 CDA09_16280 b6c8e9c2783d6bf1f9028e1d5425fdf4 207 SUPERFAMILY SSF53335 27 205 1.07E-41 T 01-11-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase CDA09_16280 b6c8e9c2783d6bf1f9028e1d5425fdf4 207 PIRSF PIRSF005461 1 207 1.4E-76 T 01-11-2018 IPR015507 Ribosomal RNA large subunit methyltransferase E GO:0001510|GO:0008168 CDA09_18600 9c4f75285f40043b30b14127d301ccfa 147 SUPERFAMILY SSF54637 3 146 1.22E-29 T 01-11-2018 IPR029069 HotDog domain superfamily CDA09_18600 9c4f75285f40043b30b14127d301ccfa 147 Pfam PF01575 MaoC like domain 17 115 3.7E-19 T 01-11-2018 IPR002539 MaoC-like dehydratase domain CDA09_18600 9c4f75285f40043b30b14127d301ccfa 147 Gene3D G3DSA:3.10.129.10 1 147 5.6E-37 T 01-11-2018 CDA09_13330 c8d14525b0db7c48ab52db14ba1d5a33 141 Pfam PF08897 Domain of unknown function (DUF1841) 5 137 9.2E-56 T 01-11-2018 IPR014993 Protein of unknown function DUF1841 CDA09_10875 7f3e19d4b6c79f5aec09a388297a20c7 520 Pfam PF06253 Trimethylamine methyltransferase (MTTB) 8 516 2.1E-225 T 01-11-2018 IPR010426 Trimethylamine methyltransferase GO:0008168|GO:0015948 KEGG: 00680+2.1.1.250|MetaCyc: PWY-5250 CDA09_10875 7f3e19d4b6c79f5aec09a388297a20c7 520 Gene3D G3DSA:3.20.20.480 25 520 1.7E-175 T 01-11-2018 IPR038601 MttB-like superfamily KEGG: 00680+2.1.1.250|MetaCyc: PWY-5250 CDA09_10875 7f3e19d4b6c79f5aec09a388297a20c7 520 PIRSF PIRSF037567 1 520 7.8E-160 T 01-11-2018 IPR010426 Trimethylamine methyltransferase GO:0008168|GO:0015948 KEGG: 00680+2.1.1.250|MetaCyc: PWY-5250 CDA09_18665 644d127474c47980590b09d4404ee2bc 307 TIGRFAM TIGR01352 tonB_Cterm: TonB family C-terminal domain 223 299 5.6E-13 T 01-11-2018 IPR006260 TonB/TolA, C-terminal CDA09_18665 644d127474c47980590b09d4404ee2bc 307 Pfam PF03544 Gram-negative bacterial TonB protein C-terminal 223 286 2.3E-11 T 01-11-2018 IPR037682 TonB, C-terminal GO:0055085 CDA09_18665 644d127474c47980590b09d4404ee2bc 307 Gene3D G3DSA:3.30.1150.10 182 300 4.2E-20 T 01-11-2018 CDA09_18665 644d127474c47980590b09d4404ee2bc 307 SUPERFAMILY SSF74653 187 300 1.96E-20 T 01-11-2018 CDA09_10465 f7f8dd596b5312ecf65fc8cbbed3aab3 113 Gene3D G3DSA:3.10.20.30 2 97 3.8E-21 T 01-11-2018 IPR012675 Beta-grasp domain superfamily CDA09_10465 f7f8dd596b5312ecf65fc8cbbed3aab3 113 Pfam PF00111 2Fe-2S iron-sulfur cluster binding domain 5 82 6.6E-15 T 01-11-2018 IPR001041 2Fe-2S ferredoxin-type iron-sulfur binding domain GO:0009055|GO:0051536 CDA09_10465 f7f8dd596b5312ecf65fc8cbbed3aab3 113 SUPERFAMILY SSF54292 2 92 3.41E-22 T 01-11-2018 IPR036010 2Fe-2S ferredoxin-like superfamily GO:0009055|GO:0051536 CDA09_04605 e0764f9183dea48e65f4d9dc9a93fdfe 394 SUPERFAMILY SSF53335 130 381 1.74E-77 T 01-11-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase CDA09_04605 e0764f9183dea48e65f4d9dc9a93fdfe 394 Gene3D G3DSA:3.40.50.150 128 387 5.4E-97 T 01-11-2018 CDA09_04605 e0764f9183dea48e65f4d9dc9a93fdfe 394 PIRSF PIRSF003085 20 389 2.4E-116 T 01-11-2018 IPR003333 Mycolic acid cyclopropane synthase GO:0008610 CDA09_04605 e0764f9183dea48e65f4d9dc9a93fdfe 394 Pfam PF02353 Mycolic acid cyclopropane synthetase 123 379 2.1E-90 T 01-11-2018 CDA09_01535 6709338d5017cc050c56fbc0167a2f80 404 Pfam PF09594 Glycosyltransferase family 87 96 314 2.4E-32 T 01-11-2018 IPR018584 Glycosyltransferase family 87 GO:0016758 CDA09_19690 a4cbe04c63a865aa1cf5b004107aab37 272 Pfam PF01048 Phosphorylase superfamily 32 253 7.1E-42 T 01-11-2018 IPR000845 Nucleoside phosphorylase domain GO:0003824|GO:0009116 CDA09_19690 a4cbe04c63a865aa1cf5b004107aab37 272 TIGRFAM TIGR01704 MTA/SAH-Nsdase: MTA/SAH nucleosidase 32 258 3.0E-34 T 01-11-2018 IPR010049 MTA/SAH nucleosidase GO:0008782|GO:0008930|GO:0009164|GO:0019509 KEGG: 00270+3.2.2.9|MetaCyc: PWY-6151|MetaCyc: PWY-6153|MetaCyc: PWY-6154 CDA09_19690 a4cbe04c63a865aa1cf5b004107aab37 272 SUPERFAMILY SSF53167 32 253 6.15E-51 T 01-11-2018 IPR035994 Nucleoside phosphorylase superfamily GO:0003824|GO:0009116 CDA09_19690 a4cbe04c63a865aa1cf5b004107aab37 272 Gene3D G3DSA:3.40.50.1580 29 255 5.8E-56 T 01-11-2018 CDA09_15905 1d07c32b05c67f05a40f5710da1b76da 120 Pfam PF03692 Putative zinc- or iron-chelating domain 6 99 1.5E-10 T 01-11-2018 IPR005358 Putative zinc- or iron-chelating domain containing protein CDA09_17725 ffd6050f36994245389bc63d1bd0503c 138 Gene3D G3DSA:2.60.40.790 1 138 6.7E-35 T 01-11-2018 IPR008978 HSP20-like chaperone CDA09_17725 ffd6050f36994245389bc63d1bd0503c 138 Pfam PF00011 Hsp20/alpha crystallin family 37 137 1.7E-19 T 01-11-2018 IPR002068 Alpha crystallin/Hsp20 domain CDA09_17725 ffd6050f36994245389bc63d1bd0503c 138 SUPERFAMILY SSF49764 8 137 7.63E-37 T 01-11-2018 IPR008978 HSP20-like chaperone CDA09_12700 b98d70009153fd9aa59a975bfaa129c2 286 SMART SM00987 126 273 4.0E-41 T 01-11-2018 CDA09_12700 b98d70009153fd9aa59a975bfaa129c2 286 SUPERFAMILY SSF52141 101 279 1.7E-61 T 01-11-2018 IPR036895 Uracil-DNA glycosylase-like domain superfamily Reactome: R-HSA-110328|Reactome: R-HSA-110329|Reactome: R-HSA-110357 CDA09_12700 b98d70009153fd9aa59a975bfaa129c2 286 SMART SM00986 126 273 4.0E-41 T 01-11-2018 IPR005122 Uracil-DNA glycosylase-like Reactome: R-HSA-110328|Reactome: R-HSA-110329|Reactome: R-HSA-110357 CDA09_12700 b98d70009153fd9aa59a975bfaa129c2 286 TIGRFAM TIGR00758 UDG_fam4: uracil-DNA glycosylase, family 4 112 273 5.2E-58 T 01-11-2018 IPR005273 Uracil-DNA glycosylase family 4 CDA09_12700 b98d70009153fd9aa59a975bfaa129c2 286 Pfam PF03167 Uracil DNA glycosylase superfamily 126 272 9.5E-46 T 01-11-2018 IPR005122 Uracil-DNA glycosylase-like Reactome: R-HSA-110328|Reactome: R-HSA-110329|Reactome: R-HSA-110357 CDA09_12700 b98d70009153fd9aa59a975bfaa129c2 286 Gene3D G3DSA:3.40.470.10 100 283 2.5E-70 T 01-11-2018 IPR036895 Uracil-DNA glycosylase-like domain superfamily Reactome: R-HSA-110328|Reactome: R-HSA-110329|Reactome: R-HSA-110357 CDA09_07490 709cc669182d6e8bf518402dbf96d4cc 314 Pfam PF01370 NAD dependent epimerase/dehydratase family 5 223 4.8E-14 T 01-11-2018 IPR001509 NAD-dependent epimerase/dehydratase GO:0003824|GO:0050662 CDA09_07490 709cc669182d6e8bf518402dbf96d4cc 314 Gene3D G3DSA:3.40.50.720 1 310 1.6E-41 T 01-11-2018 CDA09_07490 709cc669182d6e8bf518402dbf96d4cc 314 SUPERFAMILY SSF51735 3 302 2.43E-42 T 01-11-2018 IPR036291 NAD(P)-binding domain superfamily CDA09_14720 a852c75731c77729ebb5c7321ab9fd2d 256 ProSitePatterns PS00166 Enoyl-CoA hydratase/isomerase signature. 98 118 - T 01-11-2018 IPR018376 Enoyl-CoA hydratase/isomerase, conserved site GO:0003824 CDA09_14720 a852c75731c77729ebb5c7321ab9fd2d 256 Gene3D G3DSA:1.10.12.10 200 254 1.7E-18 T 01-11-2018 IPR014748 Enoyl-CoA hydratase, C-terminal CDA09_14720 a852c75731c77729ebb5c7321ab9fd2d 256 SUPERFAMILY SSF52096 1 252 1.49E-62 T 01-11-2018 IPR029045 ClpP/crotonase-like domain superfamily CDA09_14720 a852c75731c77729ebb5c7321ab9fd2d 256 Gene3D G3DSA:3.90.226.10 1 199 7.7E-61 T 01-11-2018 CDA09_14720 a852c75731c77729ebb5c7321ab9fd2d 256 Pfam PF00378 Enoyl-CoA hydratase/isomerase 11 211 3.9E-35 T 01-11-2018 IPR001753 Enoyl-CoA hydratase/isomerase GO:0003824 CDA09_17740 4545ab3ae7f20c219c28fa71e4b04535 99 SUPERFAMILY SSF47336 19 96 7.59E-12 T 01-11-2018 IPR036736 ACP-like superfamily CDA09_17740 4545ab3ae7f20c219c28fa71e4b04535 99 Pfam PF00550 Phosphopantetheine attachment site 21 93 1.1E-7 T 01-11-2018 IPR009081 Phosphopantetheine binding ACP domain CDA09_17740 4545ab3ae7f20c219c28fa71e4b04535 99 ProDom PD000887 CARRIER ACYL PHOSPHOPANTETHEINE ACP ACID FATTY BIOSYNTHESIS LIPID SYNTHESIS CHLOROPLAST 54 94 0.001 T 01-11-2018 IPR003231 Acyl carrier protein (ACP) GO:0006633 Reactome: R-HSA-389661|Reactome: R-HSA-611105|Reactome: R-HSA-6799198|Reactome: R-HSA-77289 CDA09_17740 4545ab3ae7f20c219c28fa71e4b04535 99 Gene3D G3DSA:1.10.1200.10 17 97 5.3E-21 T 01-11-2018 IPR036736 ACP-like superfamily CDA09_15430 cac41b10e4873dd1efaa9b0a5d428ff5 333 Hamap MF_02065 Endolytic murein transglycosylase [mltG]. 4 329 31.597 T 01-11-2018 IPR003770 Endolytic murein transglycosylase CDA09_15430 cac41b10e4873dd1efaa9b0a5d428ff5 333 Gene3D G3DSA:3.30.160.60 299 331 1.5E-11 T 01-11-2018 CDA09_15430 cac41b10e4873dd1efaa9b0a5d428ff5 333 TIGRFAM TIGR00247 TIGR00247: conserved hypothetical protein, YceG family 7 328 2.9E-81 T 01-11-2018 IPR003770 Endolytic murein transglycosylase CDA09_15430 cac41b10e4873dd1efaa9b0a5d428ff5 333 Pfam PF02618 YceG-like family 40 325 1.3E-76 T 01-11-2018 IPR003770 Endolytic murein transglycosylase CDA09_08345 6d56bd7ff75da4b3750b3990b1709606 67 SMART SM00834 1 39 1.1E-9 T 01-11-2018 IPR013429 Putative regulatory protein, FmdB, Zinc ribbon domain CDA09_08345 6d56bd7ff75da4b3750b3990b1709606 67 Pfam PF09723 Zinc ribbon domain 1 38 8.4E-12 T 01-11-2018 IPR013429 Putative regulatory protein, FmdB, Zinc ribbon domain CDA09_08345 6d56bd7ff75da4b3750b3990b1709606 67 TIGRFAM TIGR02605 CxxC_CxxC_SSSS: putative regulatory protein, FmdB family 1 45 3.3E-11 T 01-11-2018 IPR013429 Putative regulatory protein, FmdB, Zinc ribbon domain CDA09_12870 63690850790e7abe0d52fe95697e83c7 237 SUPERFAMILY SSF53474 20 202 4.67E-15 T 01-11-2018 IPR029058 Alpha/Beta hydrolase fold CDA09_12870 63690850790e7abe0d52fe95697e83c7 237 Gene3D G3DSA:3.40.50.1820 1 203 1.4E-29 T 01-11-2018 IPR029058 Alpha/Beta hydrolase fold CDA09_11115 d0291806255ab72fbc06d77e848bb152 210 Pfam PF07796 Protein of unknown function (DUF1638) 32 189 7.4E-42 T 01-11-2018 IPR012437 Domain of unknown function DUF1638 CDA09_03755 0da26c80521593861b812a672504bd86 259 Gene3D G3DSA:3.40.50.300 3 258 7.2E-69 T 01-11-2018 CDA09_03755 0da26c80521593861b812a672504bd86 259 Pfam PF13614 AAA domain 5 182 3.7E-44 T 01-11-2018 IPR025669 AAA domain CDA09_03755 0da26c80521593861b812a672504bd86 259 SUPERFAMILY SSF52540 1 255 5.87E-58 T 01-11-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CDA09_22895 7d56c744ebae9f05c46079235491da24 382 SUPERFAMILY SSF53067 275 377 1.69E-6 T 01-11-2018 CDA09_22895 7d56c744ebae9f05c46079235491da24 382 Gene3D G3DSA:3.30.420.350 106 362 1.1E-104 T 01-11-2018 CDA09_22895 7d56c744ebae9f05c46079235491da24 382 Gene3D G3DSA:3.30.420.360 19 374 1.1E-104 T 01-11-2018 CDA09_12375 49d58aade92923ef1cd92134511ae97a 109 Pfam PF11743 Protein of unknown function (DUF3301) 6 98 1.1E-30 T 01-11-2018 IPR021732 Protein of unknown function DUF3301 CDA09_06440 e85516ec431b5b6d2b78d778fd66f94a 133 SUPERFAMILY SSF143744 2 131 1.44E-36 T 01-11-2018 IPR038084 GlcG-like domain superfamily CDA09_06440 e85516ec431b5b6d2b78d778fd66f94a 133 Pfam PF03928 Haem-degrading 7 128 7.8E-33 T 01-11-2018 IPR005624 Haem-degrading CDA09_06440 e85516ec431b5b6d2b78d778fd66f94a 133 Gene3D G3DSA:3.30.450.150 1 133 2.3E-38 T 01-11-2018 IPR038084 GlcG-like domain superfamily CDA09_10395 17294cf49a702e02e7df316693f91d69 731 Pfam PF02624 YcaO cyclodehydratase, ATP-ad Mg2+-binding 205 540 5.5E-71 T 01-11-2018 IPR003776 YcaO-like domain CDA09_10395 17294cf49a702e02e7df316693f91d69 731 Gene3D G3DSA:3.30.300.20 3 128 8.3E-16 T 01-11-2018 IPR015946 K homology domain-like, alpha/beta CDA09_10395 17294cf49a702e02e7df316693f91d69 731 TIGRFAM TIGR00702 TIGR00702: YcaO-type kinase domain 159 551 1.6E-96 T 01-11-2018 IPR003776 YcaO-like domain CDA09_10395 17294cf49a702e02e7df316693f91d69 731 Pfam PF02566 OsmC-like protein 32 126 6.2E-10 T 01-11-2018 IPR003718 OsmC/Ohr family CDA09_10395 17294cf49a702e02e7df316693f91d69 731 SUPERFAMILY SSF82784 1 125 6.54E-20 T 01-11-2018 IPR036102 OsmC/Ohr superfamily CDA09_10395 17294cf49a702e02e7df316693f91d69 731 TIGRFAM TIGR03549 TIGR03549: YcaO domain protein 2 727 0.0 T 01-11-2018 IPR019938 YcaO domain protein CDA09_05760 2890d78631ece181f589b084b9a45b9e 325 Gene3D G3DSA:3.40.50.1100 46 148 3.8E-121 T 01-11-2018 CDA09_05760 2890d78631ece181f589b084b9a45b9e 325 TIGRFAM TIGR01139 cysK: cysteine synthase A 9 314 2.2E-138 T 01-11-2018 IPR005859 Cysteine synthase CysK GO:0004124|GO:0006535 KEGG: 00270+2.5.1.47|KEGG: 00920+2.5.1.47|MetaCyc: PWY-6936 CDA09_05760 2890d78631ece181f589b084b9a45b9e 325 TIGRFAM TIGR01136 cysKM: cysteine synthase 9 314 1.6E-132 T 01-11-2018 IPR005856 Cysteine synthase GO:0004124|GO:0006535 KEGG: 00270+2.5.1.47|KEGG: 00920+2.5.1.47|MetaCyc: PWY-6936 CDA09_05760 2890d78631ece181f589b084b9a45b9e 325 Gene3D G3DSA:3.40.50.1100 12 309 3.8E-121 T 01-11-2018 CDA09_05760 2890d78631ece181f589b084b9a45b9e 325 Pfam PF00291 Pyridoxal-phosphate dependent enzyme 11 303 2.0E-64 T 01-11-2018 IPR001926 Pyridoxal-phosphate dependent enzyme CDA09_05760 2890d78631ece181f589b084b9a45b9e 325 ProSitePatterns PS00901 Cysteine synthase/cystathionine beta-synthase P-phosphate attachment site. 34 52 - T 01-11-2018 IPR001216 Cysteine synthase/cystathionine beta-synthase, pyridoxal-phosphate attachment site GO:0006535 CDA09_05760 2890d78631ece181f589b084b9a45b9e 325 SUPERFAMILY SSF53686 4 317 1.83E-96 T 01-11-2018 IPR036052 Tryptophan synthase beta subunit-like PLP-dependent enzyme CDA09_07580 5fc2debabd7cbfd277c36a76044cc97b 312 Pfam PF09828 Chromate resistance exported protein 178 305 1.3E-44 T 01-11-2018 IPR018634 Chromate resistance exported protein CDA09_12740 ff423224eca46b1509fb41ca13e722f6 95 PIRSF PIRSF003113 1 95 3.5E-25 T 01-11-2018 IPR002634 BolA protein CDA09_12740 ff423224eca46b1509fb41ca13e722f6 95 SUPERFAMILY SSF82657 3 88 2.09E-24 T 01-11-2018 IPR036065 BolA-like superfamily CDA09_12740 ff423224eca46b1509fb41ca13e722f6 95 Gene3D G3DSA:3.30.300.90 2 89 6.0E-25 T 01-11-2018 CDA09_12740 ff423224eca46b1509fb41ca13e722f6 95 Pfam PF01722 BolA-like protein 13 85 1.3E-25 T 01-11-2018 IPR002634 BolA protein CDA09_19640 7d366d6f310af48f3048f3566002f35b 316 Gene3D G3DSA:3.40.50.2300 131 295 1.1E-20 T 01-11-2018 CDA09_19640 7d366d6f310af48f3048f3566002f35b 316 Gene3D G3DSA:3.40.50.2300 78 277 1.1E-20 T 01-11-2018 CDA09_19640 7d366d6f310af48f3048f3566002f35b 316 Pfam PF04392 ABC transporter substrate binding protein 78 296 1.5E-11 T 01-11-2018 IPR007487 ABC transporter, substrate-binding protein CDA09_18705 e20082154e8c15ed83cea4722cdcda55 121 SUPERFAMILY SSF52172 4 120 5.27E-41 T 01-11-2018 IPR011006 CheY-like superfamily CDA09_18705 e20082154e8c15ed83cea4722cdcda55 121 Gene3D G3DSA:3.40.50.12740 4 121 1.1E-47 T 01-11-2018 CDA09_18705 e20082154e8c15ed83cea4722cdcda55 121 SMART SM00448 4 117 3.0E-43 T 01-11-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 CDA09_18705 e20082154e8c15ed83cea4722cdcda55 121 Pfam PF00072 Response regulator receiver domain 6 118 3.4E-31 T 01-11-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 CDA09_09480 d9a59623c289d3c9e6bdfeb332a4fc45 153 SUPERFAMILY SSF54637 10 147 1.18E-33 T 01-11-2018 IPR029069 HotDog domain superfamily CDA09_09480 d9a59623c289d3c9e6bdfeb332a4fc45 153 Pfam PF01575 MaoC like domain 14 129 3.4E-24 T 01-11-2018 IPR002539 MaoC-like dehydratase domain CDA09_09480 d9a59623c289d3c9e6bdfeb332a4fc45 153 Gene3D G3DSA:3.10.129.10 3 151 3.1E-47 T 01-11-2018 CDA09_01945 d3c10dd86c96d9d63ea1908aaef07867 226 Pfam PF00510 Cytochrome c oxidase subunit III 34 226 7.7E-23 T 01-11-2018 IPR000298 Cytochrome c oxidase subunit III-like GO:0015002|GO:0016020 Reactome: R-HSA-5628897|Reactome: R-HSA-611105 CDA09_01945 d3c10dd86c96d9d63ea1908aaef07867 226 SUPERFAMILY SSF81452 23 226 1.96E-51 T 01-11-2018 IPR035973 Cytochrome c oxidase subunit III-like superfamily GO:0015002|GO:0016020 Reactome: R-HSA-5628897|Reactome: R-HSA-611105 CDA09_01945 d3c10dd86c96d9d63ea1908aaef07867 226 Gene3D G3DSA:1.20.120.80 33 226 8.4E-56 T 01-11-2018 IPR013833 Cytochrome c oxidase, subunit III, 4-helical bundle GO:0004129|GO:0016020|GO:0022904 Reactome: R-HSA-5628897|Reactome: R-HSA-611105 CDA09_08675 de3a1e8a5ca9f39cad08fe91e8da9ad2 436 Gene3D G3DSA:1.20.1250.20 235 433 3.0E-30 T 01-11-2018 CDA09_08675 de3a1e8a5ca9f39cad08fe91e8da9ad2 436 PIRSF PIRSF002808 2 433 9.0E-34 T 01-11-2018 IPR000849 Sugar phosphate transporter GO:0016021|GO:0022857|GO:0055085 CDA09_08675 de3a1e8a5ca9f39cad08fe91e8da9ad2 436 Pfam PF07690 Major Facilitator Superfamily 29 389 4.4E-51 T 01-11-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 CDA09_08675 de3a1e8a5ca9f39cad08fe91e8da9ad2 436 SUPERFAMILY SSF103473 14 428 1.16E-76 T 01-11-2018 IPR036259 MFS transporter superfamily CDA09_08675 de3a1e8a5ca9f39cad08fe91e8da9ad2 436 Gene3D G3DSA:1.20.1250.20 13 210 3.0E-46 T 01-11-2018 CDA09_13765 25a68c8c338b31e64bd1e71fc8239029 235 Pfam PF13676 TIR domain 104 202 9.6E-12 T 01-11-2018 IPR000157 Toll/interleukin-1 receptor homology (TIR) domain GO:0005515|GO:0007165 CDA09_13765 25a68c8c338b31e64bd1e71fc8239029 235 Gene3D G3DSA:3.40.50.10140 68 231 9.8E-20 T 01-11-2018 IPR035897 Toll/interleukin-1 receptor homology (TIR) domain superfamily CDA09_13765 25a68c8c338b31e64bd1e71fc8239029 235 SUPERFAMILY SSF52200 98 207 1.83E-15 T 01-11-2018 IPR035897 Toll/interleukin-1 receptor homology (TIR) domain superfamily CDA09_20050 251b3964879c258f13769c89bb034675 260 SUPERFAMILY SSF52096 2 260 4.69E-73 T 01-11-2018 IPR029045 ClpP/crotonase-like domain superfamily CDA09_20050 251b3964879c258f13769c89bb034675 260 Pfam PF00378 Enoyl-CoA hydratase/isomerase 11 259 5.5E-48 T 01-11-2018 IPR001753 Enoyl-CoA hydratase/isomerase GO:0003824 CDA09_20050 251b3964879c258f13769c89bb034675 260 Gene3D G3DSA:1.10.12.10 205 260 3.0E-24 T 01-11-2018 IPR014748 Enoyl-CoA hydratase, C-terminal CDA09_20050 251b3964879c258f13769c89bb034675 260 Gene3D G3DSA:3.90.226.10 1 204 3.7E-63 T 01-11-2018 CDA09_07540 bea13363f26800713df78c094c214925 60 Pfam PF08201 BssC/TutF protein 4 56 8.3E-25 T 01-11-2018 IPR013161 Benzylsuccinate synthase gamma subunit KEGG: 00623+4.1.99.11|MetaCyc: PWY-81 CDA09_07540 bea13363f26800713df78c094c214925 60 Gene3D G3DSA:2.30.30.1070 1 60 6.1E-31 T 01-11-2018 IPR038640 Benzylsuccinate synthase gamma subunit superfamily KEGG: 00623+4.1.99.11|MetaCyc: PWY-81 CDA09_07750 f11f97d84284a135997a37ee391b3f9a 126 Pfam PF00011 Hsp20/alpha crystallin family 25 123 5.1E-15 T 01-11-2018 IPR002068 Alpha crystallin/Hsp20 domain CDA09_07750 f11f97d84284a135997a37ee391b3f9a 126 Gene3D G3DSA:2.60.40.790 1 124 1.1E-23 T 01-11-2018 IPR008978 HSP20-like chaperone CDA09_07750 f11f97d84284a135997a37ee391b3f9a 126 SUPERFAMILY SSF49764 16 125 3.49E-26 T 01-11-2018 IPR008978 HSP20-like chaperone CDA09_07370 b0427491e9e3479bebb7b59eb6138c0c 115 Pfam PF05717 IS66 Orf2 like protein 8 104 6.4E-32 T 01-11-2018 IPR008878 Transposase IS66, Orf2 CDA09_13855 9c6363303f381f5dab13b505ab65ac5c 399 Pfam PF07690 Major Facilitator Superfamily 208 373 2.6E-19 T 01-11-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 CDA09_13855 9c6363303f381f5dab13b505ab65ac5c 399 Pfam PF07690 Major Facilitator Superfamily 25 201 3.8E-20 T 01-11-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 CDA09_13855 9c6363303f381f5dab13b505ab65ac5c 399 Gene3D G3DSA:1.20.1250.20 4 377 3.7E-45 T 01-11-2018 CDA09_13855 9c6363303f381f5dab13b505ab65ac5c 399 SUPERFAMILY SSF103473 5 375 3.92E-53 T 01-11-2018 IPR036259 MFS transporter superfamily CDA09_09495 3c04c4a5033003a82238f673f613de82 545 Pfam PF06980 Protein of unknown function (DUF1302) 40 545 4.6E-97 T 01-11-2018 IPR010727 Protein of unknown function DUF1302 CDA09_05990 4d424e02b48644b1e98364bf45555275 88 Gene3D G3DSA:1.20.58.110 1 87 2.2E-25 T 01-11-2018 IPR036510 Ribosomal protein S20 superfamily GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 CDA09_05990 4d424e02b48644b1e98364bf45555275 88 ProDom PD004231 RIBOSOMAL S20 30S RRNA-BINDING RNA-BINDING RIBONUCLEOPROTEIN S20P SUBUNIT CHLOROPLAST DIRECT 20 83 2.0E-28 T 01-11-2018 IPR002583 Ribosomal protein S20 GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 CDA09_05990 4d424e02b48644b1e98364bf45555275 88 Pfam PF01649 Ribosomal protein S20 2 84 4.6E-24 T 01-11-2018 IPR002583 Ribosomal protein S20 GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 CDA09_05990 4d424e02b48644b1e98364bf45555275 88 Hamap MF_00500 30S ribosomal protein S20 [rpsT]. 1 85 16.035 T 01-11-2018 IPR002583 Ribosomal protein S20 GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 CDA09_05990 4d424e02b48644b1e98364bf45555275 88 SUPERFAMILY SSF46992 3 86 1.31E-26 T 01-11-2018 IPR036510 Ribosomal protein S20 superfamily GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 CDA09_05990 4d424e02b48644b1e98364bf45555275 88 TIGRFAM TIGR00029 S20: ribosomal protein bS20 1 86 1.8E-23 T 01-11-2018 IPR002583 Ribosomal protein S20 GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 CDA09_11245 096f870250fc7361e8f7558f2c664655 70 SUPERFAMILY SSF52172 6 51 2.99E-5 T 01-11-2018 IPR011006 CheY-like superfamily CDA09_02245 55e60c8c620ae1af698223afbc29cb1f 607 Pfam PF07167 Poly-beta-hydroxybutyrate polymerase (PhaC) N-terminus 109 281 8.0E-77 T 01-11-2018 IPR010941 Poly-beta-hydroxybutyrate polymerase, N-terminal domain GO:0042619 CDA09_02245 55e60c8c620ae1af698223afbc29cb1f 607 Pfam PF00561 alpha/beta hydrolase fold 292 525 2.5E-8 T 01-11-2018 IPR000073 Alpha/beta hydrolase fold-1 CDA09_02245 55e60c8c620ae1af698223afbc29cb1f 607 TIGRFAM TIGR01838 PHA_synth_I: poly(R)-hydroxyalkanoic acid synthase, class I 68 598 1.3E-237 T 01-11-2018 IPR010963 Poly(R)-hydroxyalkanoic acid synthase, class I GO:0005737|GO:0016746|GO:0042619 CDA09_02245 55e60c8c620ae1af698223afbc29cb1f 607 SUPERFAMILY SSF53474 239 535 4.16E-45 T 01-11-2018 IPR029058 Alpha/Beta hydrolase fold CDA09_14090 ad1780bd1c81301e387d13e90ab3de58 139 Pfam PF07511 Protein of unknown function (DUF1525) 25 136 7.5E-30 T 01-11-2018 IPR011090 Integrating conjugative element protein, PFL4709 CDA09_14090 ad1780bd1c81301e387d13e90ab3de58 139 TIGRFAM TIGR03757 conj_TIGR03757: integrating conjugative element protein, PFL_4709 family 25 134 2.1E-30 T 01-11-2018 IPR011090 Integrating conjugative element protein, PFL4709 CDA09_16585 ca4ba15031d06c82f3db52014592ec9a 580 Gene3D G3DSA:3.40.50.1820 251 511 8.2E-10 T 01-11-2018 IPR029058 Alpha/Beta hydrolase fold CDA09_16585 ca4ba15031d06c82f3db52014592ec9a 580 SUPERFAMILY SSF53474 229 502 8.54E-35 T 01-11-2018 IPR029058 Alpha/Beta hydrolase fold CDA09_16585 ca4ba15031d06c82f3db52014592ec9a 580 TIGRFAM TIGR01838 PHA_synth_I: poly(R)-hydroxyalkanoic acid synthase, class I 56 578 1.9E-216 T 01-11-2018 IPR010963 Poly(R)-hydroxyalkanoic acid synthase, class I GO:0005737|GO:0016746|GO:0042619 CDA09_16585 ca4ba15031d06c82f3db52014592ec9a 580 Pfam PF07167 Poly-beta-hydroxybutyrate polymerase (PhaC) N-terminus 94 261 5.4E-68 T 01-11-2018 IPR010941 Poly-beta-hydroxybutyrate polymerase, N-terminal domain GO:0042619 CDA09_10090 b973eef173ff7764904f059109992fd6 165 Gene3D G3DSA:3.10.129.10 17 147 1.1E-24 T 01-11-2018 CDA09_10090 b973eef173ff7764904f059109992fd6 165 Pfam PF01575 MaoC like domain 26 110 9.5E-5 T 01-11-2018 IPR002539 MaoC-like dehydratase domain CDA09_10090 b973eef173ff7764904f059109992fd6 165 SUPERFAMILY SSF54637 11 151 6.65E-17 T 01-11-2018 IPR029069 HotDog domain superfamily CDA09_01675 36430f8584b987ab6c4398a990510d32 277 Gene3D G3DSA:1.10.12.10 220 277 2.8E-22 T 01-11-2018 IPR014748 Enoyl-CoA hydratase, C-terminal CDA09_01675 36430f8584b987ab6c4398a990510d32 277 Pfam PF00378 Enoyl-CoA hydratase/isomerase 23 276 1.3E-62 T 01-11-2018 IPR001753 Enoyl-CoA hydratase/isomerase GO:0003824 CDA09_01675 36430f8584b987ab6c4398a990510d32 277 SUPERFAMILY SSF52096 10 276 3.27E-81 T 01-11-2018 IPR029045 ClpP/crotonase-like domain superfamily CDA09_01675 36430f8584b987ab6c4398a990510d32 277 TIGRFAM TIGR02280 PaaB1: phenylacetate degradation probable enoyl-CoA hydratase PaaB 19 276 2.1E-117 T 01-11-2018 IPR011968 Phenylacetate degradation probable enoyl-CoA hydratase PaaB GO:0010124 KEGG: 00360+5.3.3.18 CDA09_01675 36430f8584b987ab6c4398a990510d32 277 ProSitePatterns PS00166 Enoyl-CoA hydratase/isomerase signature. 118 138 - T 01-11-2018 IPR018376 Enoyl-CoA hydratase/isomerase, conserved site GO:0003824 CDA09_01675 36430f8584b987ab6c4398a990510d32 277 Gene3D G3DSA:3.90.226.10 6 218 2.8E-69 T 01-11-2018 CDA09_02035 801ad2f9c6f61c7a5f4573ac4e735fa2 312 Pfam PF11376 Protein of unknown function (DUF3179) 48 306 6.6E-88 T 01-11-2018 IPR021516 Protein of unknown function DUF3179 CDA09_03735 7fa258b59fb6253075e5b626c96af7cc 169 Gene3D G3DSA:3.30.160.150 39 169 3.5E-48 T 01-11-2018 CDA09_03735 7fa258b59fb6253075e5b626c96af7cc 169 Hamap MF_01186 LPS-assembly lipoprotein LptE [lptE]. 11 169 23.98 T 01-11-2018 IPR007485 LPS-assembly lipoprotein LptE GO:0019867|GO:0043165 CDA09_03735 7fa258b59fb6253075e5b626c96af7cc 169 Pfam PF04390 Lipopolysaccharide-assembly 44 164 3.1E-14 T 01-11-2018 IPR007485 LPS-assembly lipoprotein LptE GO:0019867|GO:0043165 CDA09_05785 b3a779dd294568c2451bf43144e4dbdf 268 Pfam PF00563 EAL domain 45 227 3.8E-14 T 01-11-2018 IPR001633 EAL domain CDA09_05785 b3a779dd294568c2451bf43144e4dbdf 268 Gene3D G3DSA:3.20.20.450 43 237 1.6E-15 T 01-11-2018 IPR035919 EAL domain superfamily CDA09_05785 b3a779dd294568c2451bf43144e4dbdf 268 SMART SM00052 17 263 2.8E-4 T 01-11-2018 IPR001633 EAL domain CDA09_05785 b3a779dd294568c2451bf43144e4dbdf 268 SUPERFAMILY SSF141868 44 259 1.31E-19 T 01-11-2018 IPR035919 EAL domain superfamily CDA09_10120 2049dd52d12a0a0a119af9bdf1021125 397 PIRSF PIRSF000429 1 397 1.2E-33 T 01-11-2018 IPR002155 Thiolase GO:0016747 CDA09_10120 2049dd52d12a0a0a119af9bdf1021125 397 SUPERFAMILY SSF53901 3 234 1.29E-27 T 01-11-2018 IPR016039 Thiolase-like GO:0003824 CDA09_10120 2049dd52d12a0a0a119af9bdf1021125 397 SUPERFAMILY SSF53901 270 386 8.2E-22 T 01-11-2018 IPR016039 Thiolase-like GO:0003824 CDA09_10120 2049dd52d12a0a0a119af9bdf1021125 397 Gene3D G3DSA:3.40.47.10 1 397 3.1E-93 T 01-11-2018 IPR016039 Thiolase-like GO:0003824 CDA09_10120 2049dd52d12a0a0a119af9bdf1021125 397 Pfam PF00108 Thiolase, N-terminal domain 4 229 5.1E-9 T 01-11-2018 IPR020616 Thiolase, N-terminal GO:0016747 CDA09_08335 42df58d7dafa82ab13b40df5d3b12ac2 95 Gene3D G3DSA:3.30.70.20 7 89 1.9E-11 T 01-11-2018 CDA09_08335 42df58d7dafa82ab13b40df5d3b12ac2 95 Pfam PF05187 Electron transfer flavoprotein-ubiquinone oxidoreductase, 4Fe-4S 18 89 2.3E-7 T 01-11-2018 CDA09_08335 42df58d7dafa82ab13b40df5d3b12ac2 95 SUPERFAMILY SSF54862 23 93 2.0E-12 T 01-11-2018 CDA09_08335 42df58d7dafa82ab13b40df5d3b12ac2 95 PIRSF PIRSF036548 1 95 3.2E-39 T 01-11-2018 IPR012206 Ferredoxin-like, FixX GO:0005506 CDA09_14240 a5798bab75dd18409a9e59aeed0ec760 337 Pfam PF00589 Phage integrase family 177 326 5.7E-13 T 01-11-2018 IPR002104 Integrase, catalytic domain GO:0003677|GO:0006310|GO:0015074 CDA09_14240 a5798bab75dd18409a9e59aeed0ec760 337 SUPERFAMILY SSF56349 57 328 1.32E-47 T 01-11-2018 IPR011010 DNA breaking-rejoining enzyme, catalytic core GO:0003677 CDA09_14240 a5798bab75dd18409a9e59aeed0ec760 337 Gene3D G3DSA:1.10.150.130 57 154 7.5E-13 T 01-11-2018 IPR010998 Integrase/recombinase, N-terminal CDA09_14240 a5798bab75dd18409a9e59aeed0ec760 337 Gene3D G3DSA:1.10.443.10 159 334 2.4E-24 T 01-11-2018 IPR013762 Integrase-like, catalytic domain superfamily GO:0003677|GO:0006310|GO:0015074 CDA09_22205 5e7bae602c29c0a7351550e3b5e7528a 71 Gene3D G3DSA:1.10.238.160 20 69 2.9E-6 T 01-11-2018 CDA09_22205 5e7bae602c29c0a7351550e3b5e7528a 71 Pfam PF05930 Prophage CP4-57 regulatory protein (AlpA) 13 63 1.3E-24 T 01-11-2018 IPR010260 DNA-binding transcriptional activator AlpA CDA09_03270 1a02d7e7a21da78b21414ec813cc5cb1 278 SUPERFAMILY SSF53335 22 226 5.29E-40 T 01-11-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase CDA09_03270 1a02d7e7a21da78b21414ec813cc5cb1 278 Gene3D G3DSA:3.40.50.150 26 261 1.4E-45 T 01-11-2018 CDA09_02640 3adbe9634c5b955f9aec86bb22506c75 260 SUPERFAMILY SSF52540 8 236 3.62E-54 T 01-11-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CDA09_02640 3adbe9634c5b955f9aec86bb22506c75 260 ProSitePatterns PS00211 ABC transporters family signature. 146 160 - T 01-11-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 CDA09_02640 3adbe9634c5b955f9aec86bb22506c75 260 SMART SM00382 34 221 1.2E-15 T 01-11-2018 IPR003593 AAA+ ATPase domain CDA09_02640 3adbe9634c5b955f9aec86bb22506c75 260 Pfam PF00005 ABC transporter 28 174 2.1E-26 T 01-11-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 CDA09_02640 3adbe9634c5b955f9aec86bb22506c75 260 Gene3D G3DSA:3.40.50.300 9 255 7.2E-60 T 01-11-2018 CDA09_03035 2edfe4e129a44b59baffe072e971764c 457 Gene3D G3DSA:3.40.50.1220 272 455 3.9E-80 T 01-11-2018 CDA09_03035 2edfe4e129a44b59baffe072e971764c 457 PIRSF PIRSF000204 1 454 2.3E-155 T 01-11-2018 IPR012136 NADP transhydrogenase, beta subunit GO:0008750|GO:0016021|GO:0050661|GO:0055114 KEGG: 00760+1.6.1.2 CDA09_03035 2edfe4e129a44b59baffe072e971764c 457 SUPERFAMILY SSF52467 279 453 7.44E-71 T 01-11-2018 IPR029035 DHS-like NAD/FAD-binding domain superfamily CDA09_03035 2edfe4e129a44b59baffe072e971764c 457 Pfam PF02233 NAD(P) transhydrogenase beta subunit 6 449 1.4E-169 T 01-11-2018 IPR034300 NADP transhydrogenase beta-like domain KEGG: 00760+1.6.1.2|Reactome: R-HSA-71403 CDA09_22815 c1979323cbf336fc26a0ea11fa2e529d 195 Gene3D G3DSA:3.40.50.150 6 174 2.9E-25 T 01-11-2018 CDA09_22815 c1979323cbf336fc26a0ea11fa2e529d 195 TIGRFAM TIGR02081 metW: methionine biosynthesis protein MetW 4 191 2.0E-72 T 01-11-2018 IPR010743 Methionine biosynthesis MetW KEGG: 00270+2.3.1.31|MetaCyc: PWY-5344 CDA09_22815 c1979323cbf336fc26a0ea11fa2e529d 195 SUPERFAMILY SSF53335 4 170 1.31E-28 T 01-11-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase CDA09_22815 c1979323cbf336fc26a0ea11fa2e529d 195 Pfam PF07021 Methionine biosynthesis protein MetW 4 191 1.3E-68 T 01-11-2018 IPR010743 Methionine biosynthesis MetW KEGG: 00270+2.3.1.31|MetaCyc: PWY-5344 CDA09_06535 b58a276d689563dd56ea4837b7b2f585 277 Pfam PF16537 Type II secretion system protein B 218 274 1.5E-10 T 01-11-2018 IPR032389 Type II secretion system protein B CDA09_06535 b58a276d689563dd56ea4837b7b2f585 277 PRINTS PR01217 Proline rich extensin signature 20 36 6.0E-10 T 01-11-2018 CDA09_06535 b58a276d689563dd56ea4837b7b2f585 277 PRINTS PR01217 Proline rich extensin signature 109 126 6.0E-10 T 01-11-2018 CDA09_06535 b58a276d689563dd56ea4837b7b2f585 277 PRINTS PR01217 Proline rich extensin signature 41 53 6.0E-10 T 01-11-2018 CDA09_06535 b58a276d689563dd56ea4837b7b2f585 277 PRINTS PR01217 Proline rich extensin signature 133 158 6.0E-10 T 01-11-2018 CDA09_06535 b58a276d689563dd56ea4837b7b2f585 277 PRINTS PR01217 Proline rich extensin signature 89 105 6.0E-10 T 01-11-2018 CDA09_06535 b58a276d689563dd56ea4837b7b2f585 277 PRINTS PR01217 Proline rich extensin signature 62 83 6.0E-10 T 01-11-2018 CDA09_21665 cb7301b85a14acfe9e51c736ce1a457b 956 TIGRFAM TIGR03744 traC_PFL_4706: conjugative transfer ATPase, PFL_4706 family 50 946 0.0 T 01-11-2018 IPR022303 Conjugative transfer ATPase CDA09_21665 cb7301b85a14acfe9e51c736ce1a457b 956 SUPERFAMILY SSF52540 478 896 3.35E-40 T 01-11-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CDA09_21665 cb7301b85a14acfe9e51c736ce1a457b 956 Pfam PF11130 F pilus assembly Type-IV secretion system for plasmid transfer 61 334 7.5E-72 T 01-11-2018 IPR025955 Type-IV secretion system protein TraC/Conjugative transfer ATPase CDA09_19935 46838eb6fe082ca68c51f05f59349a36 567 Pfam PF07730 Histidine kinase 374 437 8.5E-11 T 01-11-2018 IPR011712 Signal transduction histidine kinase, subgroup 3, dimerisation and phosphoacceptor domain GO:0000155|GO:0000160|GO:0016021|GO:0046983 CDA09_19935 46838eb6fe082ca68c51f05f59349a36 567 Gene3D G3DSA:3.30.565.10 446 565 1.3E-7 T 01-11-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily CDA09_19935 46838eb6fe082ca68c51f05f59349a36 567 SUPERFAMILY SSF55781 205 367 3.48E-5 T 01-11-2018 CDA09_19935 46838eb6fe082ca68c51f05f59349a36 567 Gene3D G3DSA:3.30.450.40 196 368 3.0E-5 T 01-11-2018 IPR029016 GAF-like domain superfamily CDA09_19935 46838eb6fe082ca68c51f05f59349a36 567 SMART SM00065 201 367 0.008 T 01-11-2018 IPR003018 GAF domain GO:0005515 CDA09_01165 673d16217c7ac82430dbff91f346922f 218 TIGRFAM TIGR04257 nanowire_3heme: c(7)-type cytochrome triheme domain 124 192 3.2E-18 T 01-11-2018 IPR026352 C(7)-type cytochrome triheme domain CDA09_01165 673d16217c7ac82430dbff91f346922f 218 Pfam PF14522 Cytochrome c7 and related cytochrome c 131 192 2.2E-7 T 01-11-2018 IPR029467 C-type polyheme cytochrome OmcB CDA09_01165 673d16217c7ac82430dbff91f346922f 218 Gene3D G3DSA:3.90.10.10 120 193 6.1E-18 T 01-11-2018 CDA09_01165 673d16217c7ac82430dbff91f346922f 218 SUPERFAMILY SSF48695 122 191 2.9E-16 T 01-11-2018 IPR036280 Multiheme cytochrome superfamily CDA09_08585 740bbc671949e4ec17c0d207d441f98a 150 Pfam PF07681 DoxX 11 93 1.7E-17 T 01-11-2018 IPR032808 DoxX family CDA09_08070 b02e31de116e341ff682205d0a42c8ae 105 SUPERFAMILY SSF46626 24 104 3.71E-9 T 01-11-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 CDA09_08070 b02e31de116e341ff682205d0a42c8ae 105 Pfam PF00034 Cytochrome c 27 103 2.1E-4 T 01-11-2018 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 Reactome: R-HSA-111457|Reactome: R-HSA-111458|Reactome: R-HSA-111459|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 CDA09_08070 b02e31de116e341ff682205d0a42c8ae 105 Gene3D G3DSA:1.10.760.10 17 105 3.6E-25 T 01-11-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 CDA09_19685 3b0f0754840ebf56da4ec7d04302bb02 182 SUPERFAMILY SSF53271 11 179 1.24E-50 T 01-11-2018 IPR029057 Phosphoribosyltransferase-like CDA09_19685 3b0f0754840ebf56da4ec7d04302bb02 182 Hamap MF_00004 Adenine phosphoribosyltransferase [apt]. 10 179 36.31 T 01-11-2018 IPR005764 Adenine phosphoribosyl transferase GO:0003999|GO:0005737|GO:0006168 KEGG: 00230+2.4.2.7|MetaCyc: PWY-6605|MetaCyc: PWY-6610|MetaCyc: PWY-7805|MetaCyc: PWY-7807|Reactome: R-HSA-6798695|Reactome: R-HSA-74217 CDA09_19685 3b0f0754840ebf56da4ec7d04302bb02 182 Gene3D G3DSA:3.40.50.2020 5 182 4.2E-63 T 01-11-2018 CDA09_19685 3b0f0754840ebf56da4ec7d04302bb02 182 TIGRFAM TIGR01090 apt: adenine phosphoribosyltransferase 11 178 2.6E-63 T 01-11-2018 IPR005764 Adenine phosphoribosyl transferase GO:0003999|GO:0005737|GO:0006168 KEGG: 00230+2.4.2.7|MetaCyc: PWY-6605|MetaCyc: PWY-6610|MetaCyc: PWY-7805|MetaCyc: PWY-7807|Reactome: R-HSA-6798695|Reactome: R-HSA-74217 CDA09_19685 3b0f0754840ebf56da4ec7d04302bb02 182 Pfam PF00156 Phosphoribosyl transferase domain 54 159 1.1E-14 T 01-11-2018 IPR000836 Phosphoribosyltransferase domain GO:0009116 CDA09_16955 763184c0e8dddd027c7f9e17c11de28d 336 Gene3D G3DSA:3.30.200.20 5 112 1.1E-14 T 01-11-2018 CDA09_16955 763184c0e8dddd027c7f9e17c11de28d 336 SUPERFAMILY SSF56112 4 310 7.79E-45 T 01-11-2018 IPR011009 Protein kinase-like domain superfamily CDA09_16955 763184c0e8dddd027c7f9e17c11de28d 336 Gene3D G3DSA:3.90.1200.10 117 320 8.6E-43 T 01-11-2018 CDA09_16955 763184c0e8dddd027c7f9e17c11de28d 336 Pfam PF01636 Phosphotransferase enzyme family 27 272 3.2E-35 T 01-11-2018 IPR002575 Aminoglycoside phosphotransferase CDA09_09145 d25e358ccaae01faf7df365e73de3965 253 ProSitePatterns PS01065 Electron transfer flavoprotein beta-subunit signature. 159 179 - T 01-11-2018 IPR000049 Electron transfer flavoprotein, beta-subunit, conserved site GO:0009055 Reactome: R-HSA-611105|Reactome: R-HSA-8876725 CDA09_09145 d25e358ccaae01faf7df365e73de3965 253 Gene3D G3DSA:3.40.50.620 1 252 8.0E-90 T 01-11-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold CDA09_09145 d25e358ccaae01faf7df365e73de3965 253 PIRSF PIRSF000090 1 253 6.3E-84 T 01-11-2018 IPR012255 Electron transfer flavoprotein, beta subunit GO:0009055 Reactome: R-HSA-611105|Reactome: R-HSA-8876725 CDA09_09145 d25e358ccaae01faf7df365e73de3965 253 Pfam PF01012 Electron transfer flavoprotein domain 30 210 2.8E-46 T 01-11-2018 IPR014730 Electron transfer flavoprotein, alpha/beta-subunit, N-terminal Reactome: R-HSA-611105 CDA09_09145 d25e358ccaae01faf7df365e73de3965 253 SMART SM00893 23 215 3.1E-67 T 01-11-2018 IPR014730 Electron transfer flavoprotein, alpha/beta-subunit, N-terminal Reactome: R-HSA-611105 CDA09_09145 d25e358ccaae01faf7df365e73de3965 253 SUPERFAMILY SSF52402 1 246 1.44E-87 T 01-11-2018 CDA09_05855 761d49ba1c402152d8d2817dc8d10781 260 SUPERFAMILY SSF161098 57 244 1.57E-28 T 01-11-2018 IPR035906 MetI-like superfamily CDA09_05855 761d49ba1c402152d8d2817dc8d10781 260 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 82 251 2.5E-20 T 01-11-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 CDA09_05855 761d49ba1c402152d8d2817dc8d10781 260 Gene3D G3DSA:1.10.3720.10 58 254 1.4E-22 T 01-11-2018 IPR035906 MetI-like superfamily CDA09_00275 e170dc7b6949953732aac40669bf5339 282 Hamap MF_00188 Protease HtpX [htpX]. 5 278 28.549 T 01-11-2018 IPR022919 Peptidase M48, protease HtpX, putative GO:0004222 CDA09_00275 e170dc7b6949953732aac40669bf5339 282 Gene3D G3DSA:3.30.2010.10 59 150 3.4E-30 T 01-11-2018 CDA09_00275 e170dc7b6949953732aac40669bf5339 282 Pfam PF01435 Peptidase family M48 69 278 4.0E-38 T 01-11-2018 IPR001915 Peptidase M48 GO:0004222|GO:0006508 CDA09_18690 a1ff6bfe34c0cc9216525e900a502840 212 SUPERFAMILY SSF51391 7 206 1.57E-58 T 01-11-2018 IPR036206 Thiamin phosphate synthase superfamily KEGG: 00730+2.5.1.3|MetaCyc: PWY-6893|MetaCyc: PWY-6894|MetaCyc: PWY-6897|MetaCyc: PWY-6907|MetaCyc: PWY-6908|MetaCyc: PWY-7356|MetaCyc: PWY-7357 CDA09_18690 a1ff6bfe34c0cc9216525e900a502840 212 Hamap MF_00097 Thiamine-phosphate synthase [thiE]. 9 209 25.287 T 01-11-2018 IPR034291 Thiamine phosphate synthase GO:0004789|GO:0009228 KEGG: 00730+2.5.1.3|MetaCyc: PWY-6893|MetaCyc: PWY-6894|MetaCyc: PWY-6897|MetaCyc: PWY-6907|MetaCyc: PWY-6908|MetaCyc: PWY-7356|MetaCyc: PWY-7357 CDA09_18690 a1ff6bfe34c0cc9216525e900a502840 212 Gene3D G3DSA:3.20.20.70 5 209 4.1E-58 T 01-11-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 CDA09_18690 a1ff6bfe34c0cc9216525e900a502840 212 TIGRFAM TIGR00693 thiE: thiamine-phosphate diphosphorylase 11 198 2.6E-52 T 01-11-2018 IPR034291 Thiamine phosphate synthase GO:0004789|GO:0009228 KEGG: 00730+2.5.1.3|MetaCyc: PWY-6893|MetaCyc: PWY-6894|MetaCyc: PWY-6897|MetaCyc: PWY-6907|MetaCyc: PWY-6908|MetaCyc: PWY-7356|MetaCyc: PWY-7357 CDA09_18690 a1ff6bfe34c0cc9216525e900a502840 212 Pfam PF02581 Thiamine monophosphate synthase 11 191 2.5E-54 T 01-11-2018 IPR022998 Thiamine phosphate synthase/TenI KEGG: 00730+2.5.1.3|MetaCyc: PWY-6893|MetaCyc: PWY-6894|MetaCyc: PWY-6897|MetaCyc: PWY-6907|MetaCyc: PWY-6908|MetaCyc: PWY-7356|MetaCyc: PWY-7357 CDA09_13250 0b01c746aa9683ee641a6b7d20382a2d 109 PIRSF PIRSF020408 1 105 3.0E-36 T 01-11-2018 IPR016772 Uncharacterised conserved protein UCP020408 CDA09_13250 0b01c746aa9683ee641a6b7d20382a2d 109 Pfam PF10087 Uncharacterized protein conserved in bacteria (DUF2325) 3 91 4.1E-17 T 01-11-2018 IPR016772 Uncharacterised conserved protein UCP020408 CDA09_05460 85d6ccaf43802f5b79fc25a0c41d88c3 113 Pfam PF04972 BON domain 44 111 7.9E-17 T 01-11-2018 IPR007055 BON domain CDA09_18445 acd6f7bc28b2c859ba2649481d73f35f 449 Pfam PF13649 Methyltransferase domain 45 134 1.2E-11 T 01-11-2018 CDA09_18445 acd6f7bc28b2c859ba2649481d73f35f 449 Gene3D G3DSA:3.40.50.150 1 219 1.4E-49 T 01-11-2018 CDA09_18445 acd6f7bc28b2c859ba2649481d73f35f 449 SUPERFAMILY SSF53335 33 191 5.73E-24 T 01-11-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase CDA09_14265 eb1e750d3ca1f5fe6ced625fc6005a58 329 Pfam PF01610 Transposase 80 320 2.1E-65 T 01-11-2018 IPR002560 Transposase IS204/IS1001/IS1096/IS1165, DDE domain CDA09_14265 eb1e750d3ca1f5fe6ced625fc6005a58 329 Pfam PF13542 Helix-turn-helix domain of transposase family ISL3 15 64 7.6E-13 T 01-11-2018 IPR032877 Transposase IS204/IS1001/IS1096/IS1165, helix-turn-helix domain CDA09_09360 eb1e750d3ca1f5fe6ced625fc6005a58 329 Pfam PF01610 Transposase 80 320 2.1E-65 T 01-11-2018 IPR002560 Transposase IS204/IS1001/IS1096/IS1165, DDE domain CDA09_09360 eb1e750d3ca1f5fe6ced625fc6005a58 329 Pfam PF13542 Helix-turn-helix domain of transposase family ISL3 15 64 7.6E-13 T 01-11-2018 IPR032877 Transposase IS204/IS1001/IS1096/IS1165, helix-turn-helix domain CDA09_05565 eb1e750d3ca1f5fe6ced625fc6005a58 329 Pfam PF01610 Transposase 80 320 2.1E-65 T 01-11-2018 IPR002560 Transposase IS204/IS1001/IS1096/IS1165, DDE domain CDA09_05565 eb1e750d3ca1f5fe6ced625fc6005a58 329 Pfam PF13542 Helix-turn-helix domain of transposase family ISL3 15 64 7.6E-13 T 01-11-2018 IPR032877 Transposase IS204/IS1001/IS1096/IS1165, helix-turn-helix domain CDA09_09470 485e74412b293d9b42529665085b5267 293 Pfam PF00106 short chain dehydrogenase 9 211 2.5E-24 T 01-11-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CDA09_09470 485e74412b293d9b42529665085b5267 293 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 96 107 1.1E-12 T 01-11-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CDA09_09470 485e74412b293d9b42529665085b5267 293 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 172 191 1.1E-12 T 01-11-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CDA09_09470 485e74412b293d9b42529665085b5267 293 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 9 26 1.1E-12 T 01-11-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CDA09_09470 485e74412b293d9b42529665085b5267 293 Gene3D G3DSA:3.40.50.720 6 264 2.3E-45 T 01-11-2018 CDA09_09470 485e74412b293d9b42529665085b5267 293 SUPERFAMILY SSF51735 6 257 1.07E-39 T 01-11-2018 IPR036291 NAD(P)-binding domain superfamily CDA09_13585 217b4bcfa966f15b624e47365c67249d 451 Pfam PF07044 Protein of unknown function (DUF1329) 83 419 3.5E-121 T 01-11-2018 IPR010752 Protein of unknown function DUF1329 CDA09_19375 a0f4320598c7783372aaaed5c6723ca1 394 Pfam PF07690 Major Facilitator Superfamily 15 346 1.9E-36 T 01-11-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 CDA09_19375 a0f4320598c7783372aaaed5c6723ca1 394 Gene3D G3DSA:1.20.1250.20 1 385 3.5E-77 T 01-11-2018 CDA09_19375 a0f4320598c7783372aaaed5c6723ca1 394 SUPERFAMILY SSF103473 2 386 1.83E-57 T 01-11-2018 IPR036259 MFS transporter superfamily CDA09_22430 ebb456f2cafb547cf6b2c7926b1b8efb 177 Pfam PF05069 Phage virion morphogenesis family 56 172 2.2E-6 T 01-11-2018 IPR006522 Phage virion morphogensis protein CDA09_15375 ac811cb81b2371a98386a513ed35379e 357 Pfam PF13353 4Fe-4S single cluster domain 42 143 7.1E-7 T 01-11-2018 CDA09_15375 ac811cb81b2371a98386a513ed35379e 357 Pfam PF06463 Molybdenum Cofactor Synthesis C 212 337 7.9E-40 T 01-11-2018 IPR010505 Molybdenum cofactor synthesis C-terminal GO:0006777|GO:0019008|GO:0051539 KEGG: 00790+4.1.99.22|MetaCyc: PWY-6823|Reactome: R-HSA-947581 CDA09_15375 ac811cb81b2371a98386a513ed35379e 357 ProSitePatterns PS01305 moaA / nifB / pqqE family signature. 41 52 - T 01-11-2018 IPR000385 MoaA/nifB/pqqE, iron-sulphur binding, conserved site GO:0003824|GO:0046872|GO:0051539 KEGG: 00790+4.1.99.22|MetaCyc: PWY-6823|Reactome: R-HSA-947581 CDA09_15375 ac811cb81b2371a98386a513ed35379e 357 Gene3D G3DSA:3.20.20.70 23 357 1.5E-100 T 01-11-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 CDA09_15375 ac811cb81b2371a98386a513ed35379e 357 Hamap MF_01225_B GTP 3',8-cyclase [moaA]. 26 357 41.061 T 01-11-2018 IPR013483 Molybdenum cofactor biosynthesis protein A GO:0006777|GO:0046872 KEGG: 00790+4.1.99.22|MetaCyc: PWY-6823|Reactome: R-HSA-947581 CDA09_15375 ac811cb81b2371a98386a513ed35379e 357 SMART SM00729 35 244 6.9E-14 T 01-11-2018 IPR006638 Elp3/MiaB/NifB GO:0003824|GO:0051536 CDA09_15375 ac811cb81b2371a98386a513ed35379e 357 SUPERFAMILY SSF102114 27 317 7.98E-78 T 01-11-2018 CDA09_15375 ac811cb81b2371a98386a513ed35379e 357 TIGRFAM TIGR02666 moaA: molybdenum cofactor biosynthesis protein A 26 357 2.8E-119 T 01-11-2018 IPR013483 Molybdenum cofactor biosynthesis protein A GO:0006777|GO:0046872 KEGG: 00790+4.1.99.22|MetaCyc: PWY-6823|Reactome: R-HSA-947581 CDA09_15375 ac811cb81b2371a98386a513ed35379e 357 Pfam PF04055 Radical SAM superfamily 39 203 3.3E-32 T 01-11-2018 IPR007197 Radical SAM GO:0003824|GO:0051536 CDA09_09675 01d1dea9aa05757ab6f6874a59d825fd 360 SMART SM00849 55 270 7.8E-31 T 01-11-2018 IPR001279 Metallo-beta-lactamase CDA09_09675 01d1dea9aa05757ab6f6874a59d825fd 360 Gene3D G3DSA:1.10.10.10 302 356 1.0E-8 T 01-11-2018 IPR036388 Winged helix-like DNA-binding domain superfamily CDA09_09675 01d1dea9aa05757ab6f6874a59d825fd 360 Pfam PF00753 Metallo-beta-lactamase superfamily 54 270 5.6E-32 T 01-11-2018 IPR001279 Metallo-beta-lactamase CDA09_09675 01d1dea9aa05757ab6f6874a59d825fd 360 SUPERFAMILY SSF56281 19 358 8.91E-75 T 01-11-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like CDA09_09675 01d1dea9aa05757ab6f6874a59d825fd 360 Gene3D G3DSA:3.60.15.10 35 295 1.9E-61 T 01-11-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like CDA09_10075 b01ca8e0a39e37b4ff1eb76ec72127a7 410 SUPERFAMILY SSF89796 9 410 1.09E-105 T 01-11-2018 IPR023606 CoA-transferase family III domain superfamily CDA09_10075 b01ca8e0a39e37b4ff1eb76ec72127a7 410 Gene3D G3DSA:3.40.50.10540 13 402 1.7E-111 T 01-11-2018 IPR023606 CoA-transferase family III domain superfamily CDA09_10075 b01ca8e0a39e37b4ff1eb76ec72127a7 410 Pfam PF02515 CoA-transferase family III 13 386 2.0E-100 T 01-11-2018 IPR003673 CoA-transferase family III GO:0003824 CDA09_10075 b01ca8e0a39e37b4ff1eb76ec72127a7 410 Gene3D G3DSA:3.30.1540.10 246 337 1.7E-111 T 01-11-2018 CDA09_02420 48a95e5d165246844dfe835d2eb9d5c1 277 ProSitePatterns PS01326 Diaminopimelate epimerase signature. 66 80 - T 01-11-2018 IPR018510 Diaminopimelate epimerase, active site GO:0005737|GO:0008837|GO:0009089 KEGG: 00300+5.1.1.7|MetaCyc: PWY-2941|MetaCyc: PWY-5097 CDA09_02420 48a95e5d165246844dfe835d2eb9d5c1 277 TIGRFAM TIGR00652 DapF: diaminopimelate epimerase 4 275 3.8E-91 T 01-11-2018 IPR001653 Diaminopimelate epimerase, DapF GO:0008837|GO:0009089 KEGG: 00300+5.1.1.7|MetaCyc: PWY-2941|MetaCyc: PWY-5097 CDA09_02420 48a95e5d165246844dfe835d2eb9d5c1 277 Pfam PF01678 Diaminopimelate epimerase 5 124 1.5E-32 T 01-11-2018 IPR001653 Diaminopimelate epimerase, DapF GO:0008837|GO:0009089 KEGG: 00300+5.1.1.7|MetaCyc: PWY-2941|MetaCyc: PWY-5097 CDA09_02420 48a95e5d165246844dfe835d2eb9d5c1 277 Pfam PF01678 Diaminopimelate epimerase 154 268 1.4E-29 T 01-11-2018 IPR001653 Diaminopimelate epimerase, DapF GO:0008837|GO:0009089 KEGG: 00300+5.1.1.7|MetaCyc: PWY-2941|MetaCyc: PWY-5097 CDA09_02420 48a95e5d165246844dfe835d2eb9d5c1 277 Gene3D G3DSA:3.10.310.10 5 272 5.3E-100 T 01-11-2018 CDA09_02420 48a95e5d165246844dfe835d2eb9d5c1 277 Hamap MF_00197 Diaminopimelate epimerase [dapF]. 3 276 38.657 T 01-11-2018 IPR001653 Diaminopimelate epimerase, DapF GO:0008837|GO:0009089 KEGG: 00300+5.1.1.7|MetaCyc: PWY-2941|MetaCyc: PWY-5097 CDA09_02420 48a95e5d165246844dfe835d2eb9d5c1 277 SUPERFAMILY SSF54506 3 276 2.09E-57 T 01-11-2018 CDA09_02420 48a95e5d165246844dfe835d2eb9d5c1 277 Gene3D G3DSA:3.10.310.10 121 269 5.3E-100 T 01-11-2018 CDA09_18660 a14dc492d2446f6100f1d6cc7bbb6bb3 637 SUPERFAMILY SSF50249 227 561 2.06E-76 T 01-11-2018 IPR012340 Nucleic acid-binding, OB-fold CDA09_18660 a14dc492d2446f6100f1d6cc7bbb6bb3 637 SMART SM00955 235 516 4.6E-64 T 01-11-2018 IPR001900 Ribonuclease II/R GO:0003723|GO:0004540 CDA09_18660 a14dc492d2446f6100f1d6cc7bbb6bb3 637 Pfam PF00773 RNB domain 475 515 1.6E-7 T 01-11-2018 IPR001900 Ribonuclease II/R GO:0003723|GO:0004540 CDA09_18660 a14dc492d2446f6100f1d6cc7bbb6bb3 637 Pfam PF00773 RNB domain 242 470 7.3E-35 T 01-11-2018 IPR001900 Ribonuclease II/R GO:0003723|GO:0004540 CDA09_02085 130820bcbd5a266a9fa6edb22bb89013 314 SUPERFAMILY SSF161098 23 300 9.16E-35 T 01-11-2018 IPR035906 MetI-like superfamily CDA09_02085 130820bcbd5a266a9fa6edb22bb89013 314 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 92 306 4.2E-17 T 01-11-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 CDA09_02085 130820bcbd5a266a9fa6edb22bb89013 314 Gene3D G3DSA:1.10.3720.10 64 310 2.0E-35 T 01-11-2018 IPR035906 MetI-like superfamily CDA09_02085 130820bcbd5a266a9fa6edb22bb89013 314 TIGRFAM TIGR02138 phosphate_pstC: phosphate ABC transporter, permease protein PstC 13 306 1.8E-90 T 01-11-2018 IPR011864 Phosphate ABC transporter, permease protein PstC GO:0005315|GO:0006817|GO:0016021 CDA09_09925 e820de25dc504b0f60ffe09a01f4db70 387 Gene3D G3DSA:1.10.10.10 316 369 4.0E-5 T 01-11-2018 IPR036388 Winged helix-like DNA-binding domain superfamily CDA09_09925 e820de25dc504b0f60ffe09a01f4db70 387 PIRSF PIRSF038925 14 382 2.1E-105 T 01-11-2018 IPR026287 Adenosine monophosphate-protein transferase CDA09_09925 e820de25dc504b0f60ffe09a01f4db70 387 Gene3D G3DSA:1.10.3290.10 53 300 3.6E-52 T 01-11-2018 IPR036597 Fido-like domain superfamily CDA09_09925 e820de25dc504b0f60ffe09a01f4db70 387 Pfam PF02661 Fic/DOC family 129 232 2.7E-20 T 01-11-2018 IPR003812 Fido domain CDA09_09925 e820de25dc504b0f60ffe09a01f4db70 387 SUPERFAMILY SSF140931 106 296 7.72E-44 T 01-11-2018 IPR036597 Fido-like domain superfamily CDA09_09925 e820de25dc504b0f60ffe09a01f4db70 387 Pfam PF13784 Fic/DOC family N-terminal 43 121 9.3E-23 T 01-11-2018 IPR025758 Fic/DOC N-terminal CDA09_19030 9d0be99c0223559820b7ade69f217b4b 108 Pfam PF05437 Branched-chain amino acid transport protein (AzlD) 7 103 1.4E-21 T 01-11-2018 IPR008407 Branched-chain amino acid transport, AzlD CDA09_21685 e4ee4f099711dd0f1602e09fd0923d6f 229 TIGRFAM TIGR03746 conj_TIGR03746: integrating conjugative element protein, PFL_4703 family 4 207 7.3E-98 T 01-11-2018 IPR021548 Protein of unknown function DUF2895 CDA09_21685 e4ee4f099711dd0f1602e09fd0923d6f 229 Pfam PF11444 Protein of unknown function (DUF2895) 6 206 6.1E-91 T 01-11-2018 IPR021548 Protein of unknown function DUF2895 CDA09_18145 8795520ae17f36c53ce4639037ffbbe7 144 Pfam PF05258 Protein of unknown function (DUF721) 3 89 1.4E-11 T 01-11-2018 IPR007922 Protein of unknown function DUF721/UPF0232 CDA09_20325 6e395eaad1547d15601be8b2e650c477 171 SUPERFAMILY SSF52540 3 166 4.46E-31 T 01-11-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CDA09_20325 6e395eaad1547d15601be8b2e650c477 171 ProSitePatterns PS01128 Shikimate kinase signature. 57 82 - T 01-11-2018 IPR023000 Shikimate kinase, conserved site KEGG: 00400+2.7.1.71|MetaCyc: PWY-6163 CDA09_20325 6e395eaad1547d15601be8b2e650c477 171 Hamap MF_00109 Shikimate kinase [aroK]. 1 167 28.403 T 01-11-2018 IPR000623 Shikimate kinase/Threonine synthase-like 1 KEGG: 00400+2.7.1.71|MetaCyc: PWY-6163 CDA09_20325 6e395eaad1547d15601be8b2e650c477 171 PRINTS PR01100 Shikimate kinase family signature 28 41 5.1E-25 T 01-11-2018 CDA09_20325 6e395eaad1547d15601be8b2e650c477 171 PRINTS PR01100 Shikimate kinase family signature 95 112 5.1E-25 T 01-11-2018 CDA09_20325 6e395eaad1547d15601be8b2e650c477 171 PRINTS PR01100 Shikimate kinase family signature 56 64 5.1E-25 T 01-11-2018 CDA09_20325 6e395eaad1547d15601be8b2e650c477 171 PRINTS PR01100 Shikimate kinase family signature 74 83 5.1E-25 T 01-11-2018 CDA09_20325 6e395eaad1547d15601be8b2e650c477 171 PRINTS PR01100 Shikimate kinase family signature 4 19 5.1E-25 T 01-11-2018 CDA09_20325 6e395eaad1547d15601be8b2e650c477 171 Pfam PF01202 Shikimate kinase 10 159 6.7E-51 T 01-11-2018 IPR031322 Shikimate kinase/gluconokinase KEGG: 00400+2.7.1.71|MetaCyc: PWY-6163 CDA09_20325 6e395eaad1547d15601be8b2e650c477 171 Gene3D G3DSA:3.40.50.300 3 171 1.5E-54 T 01-11-2018 CDA09_09255 9b125b340318512eb89d058222b5c5af 264 SUPERFAMILY SSF51735 17 263 3.38E-51 T 01-11-2018 IPR036291 NAD(P)-binding domain superfamily CDA09_09255 9b125b340318512eb89d058222b5c5af 264 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 23 262 1.7E-37 T 01-11-2018 CDA09_09255 9b125b340318512eb89d058222b5c5af 264 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 225 245 1.9E-21 T 01-11-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CDA09_09255 9b125b340318512eb89d058222b5c5af 264 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 15 32 1.9E-21 T 01-11-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CDA09_09255 9b125b340318512eb89d058222b5c5af 264 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 187 204 1.9E-21 T 01-11-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CDA09_09255 9b125b340318512eb89d058222b5c5af 264 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 140 156 1.9E-21 T 01-11-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CDA09_09255 9b125b340318512eb89d058222b5c5af 264 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 166 185 1.9E-21 T 01-11-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CDA09_09255 9b125b340318512eb89d058222b5c5af 264 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 92 103 1.9E-21 T 01-11-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CDA09_09255 9b125b340318512eb89d058222b5c5af 264 Gene3D G3DSA:3.40.50.720 9 264 6.9E-53 T 01-11-2018 CDA09_09840 a5b7d091d09d21a585e4422f68170340 225 Gene3D G3DSA:3.40.50.720 8 217 1.5E-48 T 01-11-2018 CDA09_09840 a5b7d091d09d21a585e4422f68170340 225 SUPERFAMILY SSF51735 9 211 1.46E-39 T 01-11-2018 IPR036291 NAD(P)-binding domain superfamily CDA09_09840 a5b7d091d09d21a585e4422f68170340 225 TIGRFAM TIGR01915 npdG: NADPH-dependent F420 reductase 9 216 1.1E-57 T 01-11-2018 IPR010185 NADPH-dependent F420 reductase GO:0006740|GO:0016651|GO:0050661|GO:0055114|GO:0070967 CDA09_09840 a5b7d091d09d21a585e4422f68170340 225 Pfam PF03807 NADP oxidoreductase coenzyme F420-dependent 9 104 6.4E-21 T 01-11-2018 IPR028939 Pyrroline-5-carboxylate reductase, catalytic, N-terminal CDA09_14570 5ec6212c376ecc0848801d711c23c3e9 411 SUPERFAMILY SSF103473 9 394 5.1E-47 T 01-11-2018 IPR036259 MFS transporter superfamily CDA09_14570 5ec6212c376ecc0848801d711c23c3e9 411 Gene3D G3DSA:1.20.1250.20 197 396 3.8E-18 T 01-11-2018 CDA09_14570 5ec6212c376ecc0848801d711c23c3e9 411 Pfam PF07690 Major Facilitator Superfamily 12 316 1.4E-25 T 01-11-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 CDA09_14570 5ec6212c376ecc0848801d711c23c3e9 411 Gene3D G3DSA:1.20.1250.20 8 193 6.3E-19 T 01-11-2018 CDA09_03070 3686dd1bf1f933bf656b85a2716d1b55 249 Pfam PF03009 Glycerophosphoryl diester phosphodiesterase family 15 242 2.7E-32 T 01-11-2018 IPR030395 Glycerophosphodiester phosphodiesterase domain GO:0006629|GO:0008081 CDA09_03070 3686dd1bf1f933bf656b85a2716d1b55 249 Gene3D G3DSA:3.20.20.190 6 247 1.5E-68 T 01-11-2018 IPR017946 PLC-like phosphodiesterase, TIM beta/alpha-barrel domain superfamily GO:0006629|GO:0008081 CDA09_03070 3686dd1bf1f933bf656b85a2716d1b55 249 SUPERFAMILY SSF51695 10 245 5.23E-57 T 01-11-2018 IPR017946 PLC-like phosphodiesterase, TIM beta/alpha-barrel domain superfamily GO:0006629|GO:0008081 CDA09_21035 593e8f12b920144b238c0454264f50c1 133 Gene3D G3DSA:1.10.520.40 9 130 1.3E-26 T 01-11-2018 IPR038287 Cse2 superfamily CDA09_21035 593e8f12b920144b238c0454264f50c1 133 TIGRFAM TIGR02548 casB_cse2: CRISPR type I-E/ECOLI-associated protein CasB/Cse2 8 125 2.9E-15 T 01-11-2018 IPR013382 CRISPR-associated protein Cse2 CDA09_21035 593e8f12b920144b238c0454264f50c1 133 Pfam PF09485 CRISPR-associated protein Cse2 (CRISPR_cse2) 52 125 1.2E-6 T 01-11-2018 IPR013382 CRISPR-associated protein Cse2 CDA09_10545 dbdce147a2c347938b804cb109a925e1 130 SUPERFAMILY SSF52402 2 128 2.77E-22 T 01-11-2018 CDA09_10545 dbdce147a2c347938b804cb109a925e1 130 PRINTS PR01438 Universal stress protein signature 106 128 1.4E-6 T 01-11-2018 IPR006015 Universal stress protein A CDA09_10545 dbdce147a2c347938b804cb109a925e1 130 PRINTS PR01438 Universal stress protein signature 88 100 1.4E-6 T 01-11-2018 IPR006015 Universal stress protein A CDA09_10545 dbdce147a2c347938b804cb109a925e1 130 Gene3D G3DSA:3.40.50.620 1 128 8.4E-25 T 01-11-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold CDA09_10545 dbdce147a2c347938b804cb109a925e1 130 Pfam PF00582 Universal stress protein family 2 128 1.6E-19 T 01-11-2018 IPR006016 UspA CDA09_20910 d2c51b27764ad604158a63b45cdf510f 386 Gene3D G3DSA:3.40.50.12710 2 386 4.5E-130 T 01-11-2018 IPR038375 Protein arginine methyltransferase NDUFAF7 superfamily Reactome: R-HSA-6799198 CDA09_20910 d2c51b27764ad604158a63b45cdf510f 386 Pfam PF02636 Putative S-adenosyl-L-methionine-dependent methyltransferase 74 314 6.1E-48 T 01-11-2018 IPR003788 Protein arginine methyltransferase NDUFAF7 Reactome: R-HSA-6799198 CDA09_20910 d2c51b27764ad604158a63b45cdf510f 386 SUPERFAMILY SSF53335 19 377 1.04E-93 T 01-11-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase CDA09_14385 2ea9e0860aeee63be7cd804e956d2c23 90 Gene3D G3DSA:2.40.50.100 5 89 3.3E-15 T 01-11-2018 CDA09_14385 2ea9e0860aeee63be7cd804e956d2c23 90 ProSitePatterns PS00189 2-oxo acid dehydrogenases acyltransferase component lipoyl binding site. 38 67 - T 01-11-2018 IPR003016 2-oxo acid dehydrogenase, lipoyl-binding site Reactome: R-HSA-389661 CDA09_14385 2ea9e0860aeee63be7cd804e956d2c23 90 Pfam PF00364 Biotin-requiring enzyme 27 85 2.1E-15 T 01-11-2018 IPR000089 Biotin/lipoyl attachment CDA09_14385 2ea9e0860aeee63be7cd804e956d2c23 90 SUPERFAMILY SSF51230 24 88 1.83E-16 T 01-11-2018 IPR011053 Single hybrid motif CDA09_22830 42b7d5d7fec93b39df64fd14984a55a8 240 SUPERFAMILY SSF52141 6 239 4.91E-61 T 01-11-2018 IPR036895 Uracil-DNA glycosylase-like domain superfamily Reactome: R-HSA-110328|Reactome: R-HSA-110329|Reactome: R-HSA-110357 CDA09_22830 42b7d5d7fec93b39df64fd14984a55a8 240 Gene3D G3DSA:3.40.470.10 2 240 3.5E-99 T 01-11-2018 IPR036895 Uracil-DNA glycosylase-like domain superfamily Reactome: R-HSA-110328|Reactome: R-HSA-110329|Reactome: R-HSA-110357 CDA09_04675 2e92f8080fcbea29a18f90f77993c2c4 589 Pfam PF01103 Surface antigen 304 586 5.5E-31 T 01-11-2018 IPR000184 Bacterial surface antigen (D15) GO:0019867 Reactome: R-HSA-1268020|Reactome: R-HSA-8949613 CDA09_04675 2e92f8080fcbea29a18f90f77993c2c4 589 Gene3D G3DSA:3.10.20.310 114 201 4.2E-5 T 01-11-2018 CDA09_04675 2e92f8080fcbea29a18f90f77993c2c4 589 Gene3D G3DSA:2.40.160.50 280 587 1.1E-70 T 01-11-2018 CDA09_04675 2e92f8080fcbea29a18f90f77993c2c4 589 Gene3D G3DSA:3.10.20.310 203 279 8.3E-11 T 01-11-2018 CDA09_04675 2e92f8080fcbea29a18f90f77993c2c4 589 Pfam PF07244 Surface antigen variable number repeat 118 200 6.4E-6 T 01-11-2018 IPR010827 POTRA domain, BamA/TamA-like GO:0019867 CDA09_18155 a2a12f4b5d4cff58df293173105c300c 305 Pfam PF03331 UDP-3-O-acyl N-acetylglycosamine deacetylase 4 275 4.4E-106 T 01-11-2018 IPR004463 UDP-3-O-acyl N-acetylglucosamine deacetylase GO:0008759|GO:0009245 KEGG: 00540+3.5.1.108 CDA09_18155 a2a12f4b5d4cff58df293173105c300c 305 Gene3D G3DSA:3.30.1700.10 128 303 1.6E-67 T 01-11-2018 IPR011334 UDP-3-O-acyl N-acetylglucosamine deacetylase, C-terminal GO:0008759|GO:0009245 KEGG: 00540+3.5.1.108 CDA09_18155 a2a12f4b5d4cff58df293173105c300c 305 Hamap MF_00388 UDP-3-O-acyl-N-acetylglucosamine deacetylase [lpxC]. 2 279 45.21 T 01-11-2018 IPR004463 UDP-3-O-acyl N-acetylglucosamine deacetylase GO:0008759|GO:0009245 KEGG: 00540+3.5.1.108 CDA09_18155 a2a12f4b5d4cff58df293173105c300c 305 SUPERFAMILY SSF54211 133 277 1.9E-52 T 01-11-2018 IPR020568 Ribosomal protein S5 domain 2-type fold CDA09_18155 a2a12f4b5d4cff58df293173105c300c 305 TIGRFAM TIGR00325 lpxC: UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase 2 295 1.3E-123 T 01-11-2018 IPR004463 UDP-3-O-acyl N-acetylglucosamine deacetylase GO:0008759|GO:0009245 KEGG: 00540+3.5.1.108 CDA09_18155 a2a12f4b5d4cff58df293173105c300c 305 SUPERFAMILY SSF54211 3 124 2.65E-41 T 01-11-2018 IPR020568 Ribosomal protein S5 domain 2-type fold CDA09_18155 a2a12f4b5d4cff58df293173105c300c 305 Gene3D G3DSA:3.30.230.20 1 127 8.9E-47 T 01-11-2018 IPR015870 UDP-3-O-acyl N-acetylglucosamine deacetylase, N-terminal GO:0008759|GO:0009245 KEGG: 00540+3.5.1.108 CDA09_01145 0e880ce0a761fd055d37e1baf2375f60 369 SMART SM00460 206 280 1.3E-12 T 01-11-2018 IPR002931 Transglutaminase-like CDA09_01145 0e880ce0a761fd055d37e1baf2375f60 369 SUPERFAMILY SSF54001 159 279 4.21E-20 T 01-11-2018 IPR038765 Papain-like cysteine peptidase superfamily CDA09_01145 0e880ce0a761fd055d37e1baf2375f60 369 Gene3D G3DSA:3.10.620.30 133 287 8.2E-15 T 01-11-2018 CDA09_01145 0e880ce0a761fd055d37e1baf2375f60 369 TIGRFAM TIGR01409 TAT_signal_seq: Tat (twin-arginine translocation) pathway signal sequence 2 25 4.5E-4 T 01-11-2018 IPR019546 Twin-arginine translocation pathway, signal sequence, bacterial/archaeal CDA09_01145 0e880ce0a761fd055d37e1baf2375f60 369 Pfam PF01841 Transglutaminase-like superfamily 161 278 1.1E-20 T 01-11-2018 IPR002931 Transglutaminase-like CDA09_16025 b2bcdb9253d0d57c6a91b8f23fb92882 231 SUPERFAMILY SSF52743 3 220 4.19E-29 T 01-11-2018 IPR036852 Peptidase S8/S53 domain superfamily GO:0004252|GO:0006508 CDA09_16025 b2bcdb9253d0d57c6a91b8f23fb92882 231 Pfam PF00082 Subtilase family 57 220 7.2E-8 T 01-11-2018 IPR000209 Peptidase S8/S53 domain GO:0004252|GO:0006508 CDA09_16025 b2bcdb9253d0d57c6a91b8f23fb92882 231 Gene3D G3DSA:3.40.50.200 1 227 3.6E-28 T 01-11-2018 IPR036852 Peptidase S8/S53 domain superfamily GO:0004252|GO:0006508 CDA09_06135 30d5ddae4b4b87c623b186ed52fe0ed1 216 Hamap MF_00664 Phosphatidylserine decarboxylase proenzyme [psd]. 10 216 37.351 T 01-11-2018 IPR033175 Phosphatidylserine decarboxylase, archaeal-type KEGG: 00564+4.1.1.65|MetaCyc: PWY-5669 CDA09_06135 30d5ddae4b4b87c623b186ed52fe0ed1 216 TIGRFAM TIGR00164 PS_decarb_rel: phosphatidylserine decarboxylase homolog 11 214 6.6E-70 T 01-11-2018 IPR033175 Phosphatidylserine decarboxylase, archaeal-type KEGG: 00564+4.1.1.65|MetaCyc: PWY-5669 CDA09_06135 30d5ddae4b4b87c623b186ed52fe0ed1 216 Pfam PF02666 Phosphatidylserine decarboxylase 46 212 4.7E-34 T 01-11-2018 IPR003817 Phosphatidylserine decarboxylase-related GO:0004609|GO:0008654 KEGG: 00564+4.1.1.65|MetaCyc: PWY-5669|Reactome: R-HSA-1483213 CDA09_00460 b9856d2bdb7e6257158228a7ff4d5147 113 Pfam PF03899 ATP synthase I chain 3 99 6.5E-17 T 01-11-2018 IPR005598 ATP synthase protein I CDA09_20670 ae135dc5a0ec0294c87cc3293eb8f62c 136 TIGRFAM TIGR02801 tolR: protein TolR 7 131 3.9E-42 T 01-11-2018 IPR014168 Tol-Pal system protein TolR GO:0015031|GO:0016021 CDA09_20670 ae135dc5a0ec0294c87cc3293eb8f62c 136 Gene3D G3DSA:3.30.420.270 54 128 7.8E-15 T 01-11-2018 CDA09_20670 ae135dc5a0ec0294c87cc3293eb8f62c 136 Pfam PF02472 Biopolymer transport protein ExbD/TolR 4 131 9.4E-26 T 01-11-2018 IPR003400 Biopolymer transport protein ExbD/TolR GO:0022857|GO:0055085 CDA09_05260 bed4d0d74d7fe2fa576e2d5180a45959 331 ProSitePatterns PS00957 NAD-dependent glycerol-3-phosphate dehydrogenase signature. 187 208 - T 01-11-2018 IPR006168 Glycerol-3-phosphate dehydrogenase, NAD-dependent GO:0004367|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.1.94|MetaCyc: PWY-5667|MetaCyc: PWY-5981|MetaCyc: PWY-7902|Reactome: R-HSA-1483166 CDA09_05260 bed4d0d74d7fe2fa576e2d5180a45959 331 Gene3D G3DSA:1.10.1040.10 188 331 3.2E-48 T 01-11-2018 IPR013328 6-phosphogluconate dehydrogenase, domain 2 GO:0016491|GO:0055114 CDA09_05260 bed4d0d74d7fe2fa576e2d5180a45959 331 PRINTS PR00077 NAD-dependent glycerol-3-phosphate dehydrogenase signature 172 196 1.9E-42 T 01-11-2018 IPR006168 Glycerol-3-phosphate dehydrogenase, NAD-dependent GO:0004367|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.1.94|MetaCyc: PWY-5667|MetaCyc: PWY-5981|MetaCyc: PWY-7902|Reactome: R-HSA-1483166 CDA09_05260 bed4d0d74d7fe2fa576e2d5180a45959 331 PRINTS PR00077 NAD-dependent glycerol-3-phosphate dehydrogenase signature 8 25 1.9E-42 T 01-11-2018 IPR006168 Glycerol-3-phosphate dehydrogenase, NAD-dependent GO:0004367|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.1.94|MetaCyc: PWY-5667|MetaCyc: PWY-5981|MetaCyc: PWY-7902|Reactome: R-HSA-1483166 CDA09_05260 bed4d0d74d7fe2fa576e2d5180a45959 331 PRINTS PR00077 NAD-dependent glycerol-3-phosphate dehydrogenase signature 57 84 1.9E-42 T 01-11-2018 IPR006168 Glycerol-3-phosphate dehydrogenase, NAD-dependent GO:0004367|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.1.94|MetaCyc: PWY-5667|MetaCyc: PWY-5981|MetaCyc: PWY-7902|Reactome: R-HSA-1483166 CDA09_05260 bed4d0d74d7fe2fa576e2d5180a45959 331 PRINTS PR00077 NAD-dependent glycerol-3-phosphate dehydrogenase signature 132 152 1.9E-42 T 01-11-2018 IPR006168 Glycerol-3-phosphate dehydrogenase, NAD-dependent GO:0004367|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.1.94|MetaCyc: PWY-5667|MetaCyc: PWY-5981|MetaCyc: PWY-7902|Reactome: R-HSA-1483166 CDA09_05260 bed4d0d74d7fe2fa576e2d5180a45959 331 PRINTS PR00077 NAD-dependent glycerol-3-phosphate dehydrogenase signature 237 254 1.9E-42 T 01-11-2018 IPR006168 Glycerol-3-phosphate dehydrogenase, NAD-dependent GO:0004367|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.1.94|MetaCyc: PWY-5667|MetaCyc: PWY-5981|MetaCyc: PWY-7902|Reactome: R-HSA-1483166 CDA09_05260 bed4d0d74d7fe2fa576e2d5180a45959 331 PRINTS PR00077 NAD-dependent glycerol-3-phosphate dehydrogenase signature 197 221 1.9E-42 T 01-11-2018 IPR006168 Glycerol-3-phosphate dehydrogenase, NAD-dependent GO:0004367|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.1.94|MetaCyc: PWY-5667|MetaCyc: PWY-5981|MetaCyc: PWY-7902|Reactome: R-HSA-1483166 CDA09_05260 bed4d0d74d7fe2fa576e2d5180a45959 331 Hamap MF_00394 Glycerol-3-phosphate dehydrogenase [NAD(P)+] [gpsA]. 4 322 36.545 T 01-11-2018 IPR006168 Glycerol-3-phosphate dehydrogenase, NAD-dependent GO:0004367|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.1.94|MetaCyc: PWY-5667|MetaCyc: PWY-5981|MetaCyc: PWY-7902|Reactome: R-HSA-1483166 CDA09_05260 bed4d0d74d7fe2fa576e2d5180a45959 331 Gene3D G3DSA:3.40.50.720 1 186 1.2E-55 T 01-11-2018 CDA09_05260 bed4d0d74d7fe2fa576e2d5180a45959 331 SUPERFAMILY SSF51735 3 179 6.33E-47 T 01-11-2018 IPR036291 NAD(P)-binding domain superfamily CDA09_05260 bed4d0d74d7fe2fa576e2d5180a45959 331 Pfam PF07479 NAD-dependent glycerol-3-phosphate dehydrogenase C-terminus 179 318 3.5E-49 T 01-11-2018 IPR006109 Glycerol-3-phosphate dehydrogenase, NAD-dependent, C-terminal GO:0004367|GO:0005975|GO:0055114 KEGG: 00564+1.1.1.94|MetaCyc: PWY-5667|MetaCyc: PWY-5981|MetaCyc: PWY-7902|Reactome: R-HSA-1483166 CDA09_05260 bed4d0d74d7fe2fa576e2d5180a45959 331 SUPERFAMILY SSF48179 178 331 1.58E-52 T 01-11-2018 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily GO:0055114 CDA09_05260 bed4d0d74d7fe2fa576e2d5180a45959 331 Pfam PF01210 NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus 6 159 1.4E-43 T 01-11-2018 IPR011128 Glycerol-3-phosphate dehydrogenase, NAD-dependent, N-terminal GO:0016616|GO:0046168|GO:0051287|GO:0055114 KEGG: 00564+1.1.1.94|MetaCyc: PWY-5667|MetaCyc: PWY-5981|MetaCyc: PWY-7902|Reactome: R-HSA-1483166 CDA09_05260 bed4d0d74d7fe2fa576e2d5180a45959 331 PIRSF PIRSF000114 1 331 5.7E-99 T 01-11-2018 IPR006168 Glycerol-3-phosphate dehydrogenase, NAD-dependent GO:0004367|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.1.94|MetaCyc: PWY-5667|MetaCyc: PWY-5981|MetaCyc: PWY-7902|Reactome: R-HSA-1483166 CDA09_15365 9f35616bc60eecf2149a84c657a5d0db 811 Pfam PF13654 AAA domain 27 539 1.1E-181 T 01-11-2018 CDA09_15365 9f35616bc60eecf2149a84c657a5d0db 811 Pfam PF05362 Lon protease (S16) C-terminal proteolytic domain 647 753 2.2E-9 T 01-11-2018 IPR008269 Peptidase S16, Lon proteolytic domain GO:0004176|GO:0004252|GO:0006508 CDA09_15365 9f35616bc60eecf2149a84c657a5d0db 811 SUPERFAMILY SSF52540 31 538 3.19E-7 T 01-11-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CDA09_15365 9f35616bc60eecf2149a84c657a5d0db 811 Gene3D G3DSA:3.30.230.10 542 777 4.5E-94 T 01-11-2018 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup CDA09_15365 9f35616bc60eecf2149a84c657a5d0db 811 PRINTS PR00830 Endopeptidase La (Lon) serine protease (S16) signature 565 581 2.1E-9 T 01-11-2018 CDA09_15365 9f35616bc60eecf2149a84c657a5d0db 811 PRINTS PR00830 Endopeptidase La (Lon) serine protease (S16) signature 646 665 2.1E-9 T 01-11-2018 CDA09_15365 9f35616bc60eecf2149a84c657a5d0db 811 PRINTS PR00830 Endopeptidase La (Lon) serine protease (S16) signature 676 695 2.1E-9 T 01-11-2018 CDA09_15365 9f35616bc60eecf2149a84c657a5d0db 811 PRINTS PR00830 Endopeptidase La (Lon) serine protease (S16) signature 62 81 2.1E-9 T 01-11-2018 CDA09_15365 9f35616bc60eecf2149a84c657a5d0db 811 SUPERFAMILY SSF54211 564 756 7.59E-35 T 01-11-2018 IPR020568 Ribosomal protein S5 domain 2-type fold CDA09_15365 9f35616bc60eecf2149a84c657a5d0db 811 Gene3D G3DSA:3.40.50.300 7 160 1.0E-25 T 01-11-2018 CDA09_15365 9f35616bc60eecf2149a84c657a5d0db 811 Gene3D G3DSA:3.40.50.300 232 448 4.3E-63 T 01-11-2018 CDA09_15365 9f35616bc60eecf2149a84c657a5d0db 811 Gene3D G3DSA:1.10.8.60 449 536 8.6E-6 T 01-11-2018 CDA09_09010 3018571575165a23d432c4c05e44e39d 238 SUPERFAMILY SSF89155 83 229 3.79E-21 T 01-11-2018 IPR036411 TorD-like superfamily CDA09_09010 3018571575165a23d432c4c05e44e39d 238 Gene3D G3DSA:1.10.3480.10 37 230 5.1E-25 T 01-11-2018 CDA09_09010 3018571575165a23d432c4c05e44e39d 238 Pfam PF02613 Nitrate reductase delta subunit 77 191 7.4E-16 T 01-11-2018 IPR020945 DMSO/Nitrate reductase chaperone CDA09_21970 f23391eb1a18cf2c95521c245edb22ae 409 Pfam PF02515 CoA-transferase family III 9 384 2.7E-107 T 01-11-2018 IPR003673 CoA-transferase family III GO:0003824 CDA09_21970 f23391eb1a18cf2c95521c245edb22ae 409 Gene3D G3DSA:3.30.1540.10 242 335 1.3E-114 T 01-11-2018 CDA09_21970 f23391eb1a18cf2c95521c245edb22ae 409 SUPERFAMILY SSF89796 4 408 4.84E-105 T 01-11-2018 IPR023606 CoA-transferase family III domain superfamily CDA09_21970 f23391eb1a18cf2c95521c245edb22ae 409 Gene3D G3DSA:3.40.50.10540 9 402 1.3E-114 T 01-11-2018 IPR023606 CoA-transferase family III domain superfamily CDA09_22685 6464f1774ca8495eca6fbfa7ec7d911e 256 SUPERFAMILY SSF53474 2 253 4.81E-42 T 01-11-2018 IPR029058 Alpha/Beta hydrolase fold CDA09_22685 6464f1774ca8495eca6fbfa7ec7d911e 256 Gene3D G3DSA:3.40.50.1820 2 254 4.2E-39 T 01-11-2018 IPR029058 Alpha/Beta hydrolase fold CDA09_22685 6464f1774ca8495eca6fbfa7ec7d911e 256 Pfam PF12697 Alpha/beta hydrolase family 28 246 1.2E-15 T 01-11-2018 IPR000073 Alpha/beta hydrolase fold-1 CDA09_19120 a3d38ceb7580ac9ed1e5d345eab6bd9c 87 Pfam PF05016 ParE toxin of type II toxin-antitoxin system, parDE 6 84 6.3E-12 T 01-11-2018 IPR007712 Toxin-antitoxin system, RelE/ParE toxin family CDA09_19120 a3d38ceb7580ac9ed1e5d345eab6bd9c 87 Gene3D G3DSA:3.30.2310.20 1 85 6.3E-21 T 01-11-2018 IPR035093 Toxin-antitoxin system, RelE/ParE toxin domain superfamily CDA09_19120 a3d38ceb7580ac9ed1e5d345eab6bd9c 87 SUPERFAMILY SSF143011 4 83 3.66E-21 T 01-11-2018 IPR035093 Toxin-antitoxin system, RelE/ParE toxin domain superfamily CDA09_14370 4d833a919efee433a58bf87f18f67706 308 Gene3D G3DSA:1.10.10.10 1 87 4.1E-21 T 01-11-2018 IPR036388 Winged helix-like DNA-binding domain superfamily CDA09_14370 4d833a919efee433a58bf87f18f67706 308 SUPERFAMILY SSF53850 91 296 1.36E-48 T 01-11-2018 CDA09_14370 4d833a919efee433a58bf87f18f67706 308 Gene3D G3DSA:3.40.190.10 164 265 1.7E-47 T 01-11-2018 CDA09_14370 4d833a919efee433a58bf87f18f67706 308 SUPERFAMILY SSF46785 3 105 1.78E-20 T 01-11-2018 IPR036390 Winged helix DNA-binding domain superfamily CDA09_14370 4d833a919efee433a58bf87f18f67706 308 Pfam PF03466 LysR substrate binding domain 91 292 3.5E-52 T 01-11-2018 IPR005119 LysR, substrate-binding CDA09_14370 4d833a919efee433a58bf87f18f67706 308 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 5 64 7.0E-18 T 01-11-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 CDA09_14370 4d833a919efee433a58bf87f18f67706 308 Gene3D G3DSA:3.40.190.10 91 287 1.7E-47 T 01-11-2018 CDA09_20025 81208e5273319eb9876b7142c423d1b6 324 Pfam PF00482 Type II secretion system (T2SS), protein F 157 280 3.2E-16 T 01-11-2018 IPR018076 Type II secretion system F domain CDA09_20025 81208e5273319eb9876b7142c423d1b6 324 Gene3D G3DSA:1.20.81.30 146 259 1.1E-5 T 01-11-2018 CDA09_10630 5488cc572995591d326f3b7aee08b20f 157 Gene3D G3DSA:3.30.310.70 32 153 3.7E-7 T 01-11-2018 IPR035923 TT1751-like domain superfamily CDA09_10630 5488cc572995591d326f3b7aee08b20f 157 Pfam PF03625 Domain of unknown function DUF302 69 123 2.4E-5 T 01-11-2018 IPR005180 Domain of unknown function DUF302 CDA09_10630 5488cc572995591d326f3b7aee08b20f 157 SUPERFAMILY SSF103247 33 151 7.59E-22 T 01-11-2018 IPR035923 TT1751-like domain superfamily CDA09_04895 dd543c3b26add6626721cb1a678f44b8 273 PIRSF PIRSF003073 1 250 7.5E-72 T 01-11-2018 IPR028350 DNA replication protein DnaC/insertion sequence putative ATP-binding protein CDA09_04895 dd543c3b26add6626721cb1a678f44b8 273 SUPERFAMILY SSF52540 92 230 3.3E-21 T 01-11-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CDA09_04895 dd543c3b26add6626721cb1a678f44b8 273 SMART SM00382 95 232 1.5E-8 T 01-11-2018 IPR003593 AAA+ ATPase domain CDA09_04895 dd543c3b26add6626721cb1a678f44b8 273 Pfam PF01695 IstB-like ATP binding protein 52 228 4.5E-61 T 01-11-2018 IPR002611 IstB-like ATP-binding protein GO:0005524 CDA09_04895 dd543c3b26add6626721cb1a678f44b8 273 Gene3D G3DSA:3.40.50.300 59 246 2.4E-42 T 01-11-2018 CDA09_01295 122e268f9803fd8e658e761bc3edf66b 225 TIGRFAM TIGR01190 ccmB: heme exporter protein CcmB 11 221 3.1E-68 T 01-11-2018 IPR026031 Cytochrome c-type biogenesis protein CcmB, bacteria CDA09_01295 122e268f9803fd8e658e761bc3edf66b 225 PRINTS PR01414 Cytochrome c-type biogenesis protein CcmB signature 137 160 4.9E-59 T 01-11-2018 CDA09_01295 122e268f9803fd8e658e761bc3edf66b 225 PRINTS PR01414 Cytochrome c-type biogenesis protein CcmB signature 198 221 4.9E-59 T 01-11-2018 CDA09_01295 122e268f9803fd8e658e761bc3edf66b 225 PRINTS PR01414 Cytochrome c-type biogenesis protein CcmB signature 81 104 4.9E-59 T 01-11-2018 CDA09_01295 122e268f9803fd8e658e761bc3edf66b 225 PRINTS PR01414 Cytochrome c-type biogenesis protein CcmB signature 32 53 4.9E-59 T 01-11-2018 CDA09_01295 122e268f9803fd8e658e761bc3edf66b 225 PRINTS PR01414 Cytochrome c-type biogenesis protein CcmB signature 58 75 4.9E-59 T 01-11-2018 CDA09_01295 122e268f9803fd8e658e761bc3edf66b 225 PRINTS PR01414 Cytochrome c-type biogenesis protein CcmB signature 160 179 4.9E-59 T 01-11-2018 CDA09_01295 122e268f9803fd8e658e761bc3edf66b 225 PRINTS PR01414 Cytochrome c-type biogenesis protein CcmB signature 106 124 4.9E-59 T 01-11-2018 CDA09_01295 122e268f9803fd8e658e761bc3edf66b 225 PIRSF PIRSF002764 2 225 5.5E-76 T 01-11-2018 IPR026031 Cytochrome c-type biogenesis protein CcmB, bacteria CDA09_01295 122e268f9803fd8e658e761bc3edf66b 225 Pfam PF03379 CcmB protein 9 222 1.5E-71 T 01-11-2018 IPR003544 Cytochrome c-type biogenesis protein CcmB GO:0015232|GO:0015886|GO:0016020|GO:0017004 CDA09_20130 60f2dcfc462e8a9b1914dda8ff1b79cf 45 TIGRFAM TIGR02459 CbtB: cobalt transporter subunit CbtB (proposed) 5 45 1.5E-21 T 01-11-2018 IPR012667 Cobalt transporter subunit CbtB, putative CDA09_20130 60f2dcfc462e8a9b1914dda8ff1b79cf 45 Pfam PF09489 Probable cobalt transporter subunit (CbtB) 4 45 3.1E-20 T 01-11-2018 IPR012667 Cobalt transporter subunit CbtB, putative CDA09_20600 1ee039861a2bf42af42241897c869b3e 259 Pfam PF01925 Sulfite exporter TauE/SafE 7 256 6.8E-46 T 01-11-2018 IPR002781 Transmembrane protein TauE-like GO:0016021 CDA09_07620 c6eb072187ea9f642fc46a392d25d459 602 SUPERFAMILY SSF102405 17 192 1.1E-8 T 01-11-2018 CDA09_08405 4b5908995ec9b1cf7d8c1def985ae034 165 Gene3D G3DSA:1.10.3100.20 10 165 2.9E-60 T 01-11-2018 CDA09_08405 4b5908995ec9b1cf7d8c1def985ae034 165 PIRSF PIRSF005788 5 165 1.1E-59 T 01-11-2018 IPR004952 Uncharacterised protein family UPF0460 CDA09_08405 4b5908995ec9b1cf7d8c1def985ae034 165 TIGRFAM TIGR02935 TIGR02935: probable nitrogen fixation protein 25 163 1.7E-55 T 01-11-2018 IPR004952 Uncharacterised protein family UPF0460 CDA09_08405 4b5908995ec9b1cf7d8c1def985ae034 165 Pfam PF03270 Protein of unknown function, DUF269 44 164 1.1E-46 T 01-11-2018 IPR004952 Uncharacterised protein family UPF0460 CDA09_19850 a5471d9e80aef2988cea794212921eb2 291 Pfam PF04228 Putative neutral zinc metallopeptidase 1 286 2.5E-121 T 01-11-2018 IPR007343 Uncharacterised protein family, zinc metallopeptidase putative CDA09_09350 b948a296720adec8cfca8067080ef61c 282 Pfam PF08843 Nucleotidyl transferase AbiEii toxin, Type IV TA system 32 238 1.0E-25 T 01-11-2018 IPR014942 Nucleotidyl transferase AbiEii toxin, Type IV TA system CDA09_19060 f21cf50ab8d04abe3112db7b133cdf7f 116 Gene3D G3DSA:2.40.50.320 43 115 4.0E-23 T 01-11-2018 CDA09_19060 f21cf50ab8d04abe3112db7b133cdf7f 116 Pfam PF11604 Copper binding periplasmic protein CusF 48 113 8.0E-27 T 01-11-2018 IPR021647 Copper binding periplasmic protein CusF CDA09_08505 14576c1c1b7671c5f5c786d9db5aded5 251 SUPERFAMILY SSF52540 5 246 1.33E-57 T 01-11-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CDA09_08505 14576c1c1b7671c5f5c786d9db5aded5 251 Gene3D G3DSA:3.40.50.300 4 251 3.1E-57 T 01-11-2018 CDA09_08505 14576c1c1b7671c5f5c786d9db5aded5 251 Pfam PF12399 Branched-chain amino acid ATP-binding cassette transporter 229 246 8.3E-6 T 01-11-2018 IPR032823 Branched-chain amino acid ATP-binding cassette transporter, C-terminal CDA09_08505 14576c1c1b7671c5f5c786d9db5aded5 251 SMART SM00382 30 223 2.2E-12 T 01-11-2018 IPR003593 AAA+ ATPase domain CDA09_08505 14576c1c1b7671c5f5c786d9db5aded5 251 Pfam PF00005 ABC transporter 22 176 1.3E-30 T 01-11-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 CDA09_12665 553c0bd5c6323565801ede69d305ed5f 235 SMART SM00382 34 231 3.2E-17 T 01-11-2018 IPR003593 AAA+ ATPase domain CDA09_12665 553c0bd5c6323565801ede69d305ed5f 235 Gene3D G3DSA:3.40.50.300 4 234 6.8E-62 T 01-11-2018 CDA09_12665 553c0bd5c6323565801ede69d305ed5f 235 SUPERFAMILY SSF52540 6 229 3.59E-62 T 01-11-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CDA09_12665 553c0bd5c6323565801ede69d305ed5f 235 Pfam PF00005 ABC transporter 25 176 5.4E-30 T 01-11-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 CDA09_12665 553c0bd5c6323565801ede69d305ed5f 235 ProSitePatterns PS00211 ABC transporters family signature. 148 162 - T 01-11-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 CDA09_12945 cd4ad542b98471a0d1daaffe9f677cad 123 Gene3D G3DSA:3.40.50.2300 2 123 2.6E-29 T 01-11-2018 CDA09_12945 cd4ad542b98471a0d1daaffe9f677cad 123 SMART SM00448 3 118 6.5E-27 T 01-11-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 CDA09_12945 cd4ad542b98471a0d1daaffe9f677cad 123 Pfam PF00072 Response regulator receiver domain 6 118 2.7E-24 T 01-11-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 CDA09_12945 cd4ad542b98471a0d1daaffe9f677cad 123 SUPERFAMILY SSF52172 3 122 1.38E-30 T 01-11-2018 IPR011006 CheY-like superfamily CDA09_06290 22add3a58e6c1f074a90ae0411bf71b1 187 Pfam PF10604 Polyketide cyclase / dehydrase and lipid transport 45 177 3.7E-9 T 01-11-2018 IPR019587 Polyketide cyclase/dehydrase CDA09_06290 22add3a58e6c1f074a90ae0411bf71b1 187 Gene3D G3DSA:3.30.530.20 45 187 2.7E-19 T 01-11-2018 IPR023393 START-like domain superfamily CDA09_06290 22add3a58e6c1f074a90ae0411bf71b1 187 SUPERFAMILY SSF55961 50 183 3.83E-20 T 01-11-2018 CDA09_13285 f83d4d2dea33e0ef4441b65317ac685d 246 Pfam PF04377 Arginine-tRNA-protein transferase, C terminus 108 227 2.0E-40 T 01-11-2018 IPR007472 N-end rule aminoacyl transferase, C-terminal GO:0004057|GO:0016598 MetaCyc: PWY-7802 CDA09_13285 f83d4d2dea33e0ef4441b65317ac685d 246 Pfam PF04376 Arginine-tRNA-protein transferase, N terminus 18 88 4.7E-17 T 01-11-2018 IPR007471 N-end aminoacyl transferase, N-terminal GO:0004057|GO:0016598 MetaCyc: PWY-7802 CDA09_13285 f83d4d2dea33e0ef4441b65317ac685d 246 SUPERFAMILY SSF55729 94 236 3.0E-16 T 01-11-2018 IPR016181 Acyl-CoA N-acyltransferase CDA09_13285 f83d4d2dea33e0ef4441b65317ac685d 246 Hamap MF_00689 Aspartate/glutamate leucyltransferase [bpt]. 8 235 39.478 T 01-11-2018 IPR017138 Aspartate/glutamate leucyltransferase GO:0008914|GO:0071596 MetaCyc: PWY-7802 CDA09_13285 f83d4d2dea33e0ef4441b65317ac685d 246 PIRSF PIRSF037208 1 246 3.4E-90 T 01-11-2018 IPR017138 Aspartate/glutamate leucyltransferase GO:0008914|GO:0071596 MetaCyc: PWY-7802 CDA09_03310 e7f22bcf1540120ed96a8f3699207c6c 312 Hamap MF_00191 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [ispH]. 4 286 38.267 T 01-11-2018 IPR003451 4-hydroxy-3-methylbut-2-enyl diphosphate reductase GO:0019288|GO:0046872|GO:0050992|GO:0051745 KEGG: 00900+1.17.7.4|MetaCyc: PWY-7560 CDA09_03310 e7f22bcf1540120ed96a8f3699207c6c 312 Gene3D G3DSA:3.40.1010.20 9 281 1.5E-113 T 01-11-2018 CDA09_03310 e7f22bcf1540120ed96a8f3699207c6c 312 Gene3D G3DSA:3.40.50.11270 15 99 1.5E-113 T 01-11-2018 CDA09_03310 e7f22bcf1540120ed96a8f3699207c6c 312 Pfam PF02401 LytB protein 6 282 5.5E-93 T 01-11-2018 IPR003451 4-hydroxy-3-methylbut-2-enyl diphosphate reductase GO:0019288|GO:0046872|GO:0050992|GO:0051745 KEGG: 00900+1.17.7.4|MetaCyc: PWY-7560 CDA09_03310 e7f22bcf1540120ed96a8f3699207c6c 312 TIGRFAM TIGR00216 ispH_lytB: 4-hydroxy-3-methylbut-2-enyl diphosphate reductase 5 284 8.7E-102 T 01-11-2018 IPR003451 4-hydroxy-3-methylbut-2-enyl diphosphate reductase GO:0019288|GO:0046872|GO:0050992|GO:0051745 KEGG: 00900+1.17.7.4|MetaCyc: PWY-7560 CDA09_03310 e7f22bcf1540120ed96a8f3699207c6c 312 Gene3D G3DSA:3.40.1010.20 100 196 1.5E-113 T 01-11-2018 CDA09_11275 17e1734b51957def619d996e05ad59e3 220 SUPERFAMILY SSF161098 9 204 2.09E-40 T 01-11-2018 IPR035906 MetI-like superfamily CDA09_11275 17e1734b51957def619d996e05ad59e3 220 Gene3D G3DSA:1.10.3720.10 12 219 7.5E-42 T 01-11-2018 IPR035906 MetI-like superfamily CDA09_11275 17e1734b51957def619d996e05ad59e3 220 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 49 216 7.6E-17 T 01-11-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 CDA09_11510 1c3def0198883654d57f6e6293b0ab6a 173 Pfam PF10604 Polyketide cyclase / dehydrase and lipid transport 25 171 7.2E-38 T 01-11-2018 IPR019587 Polyketide cyclase/dehydrase CDA09_11510 1c3def0198883654d57f6e6293b0ab6a 173 SUPERFAMILY SSF55961 25 171 1.1E-33 T 01-11-2018 CDA09_11510 1c3def0198883654d57f6e6293b0ab6a 173 Gene3D G3DSA:3.30.530.20 23 171 3.7E-45 T 01-11-2018 IPR023393 START-like domain superfamily CDA09_15960 127b2e5098f0a91491206d7d1a57587b 308 Pfam PF03186 CobD/Cbib protein 29 283 4.2E-31 T 01-11-2018 IPR004485 Cobalamin biosynthesis CobD/CbiB GO:0009236|GO:0016021|GO:0048472 CDA09_15960 127b2e5098f0a91491206d7d1a57587b 308 Hamap MF_00024 Cobalamin biosynthesis protein CbiB [cbiB]. 1 308 66.313 T 01-11-2018 IPR004485 Cobalamin biosynthesis CobD/CbiB GO:0009236|GO:0016021|GO:0048472 CDA09_13145 cb6fed7396742137df37d06caee9034d 150 SUPERFAMILY SSF54690 3 148 1.96E-51 T 01-11-2018 IPR036563 Molybdopterin biosynthesis MoaE subunit superfamily GO:0006777 KEGG: 00790+2.8.1.12|MetaCyc: PWY-6823|MetaCyc: PWY-7887|Reactome: R-HSA-947581 CDA09_13145 cb6fed7396742137df37d06caee9034d 150 Gene3D G3DSA:3.90.1170.40 1 148 3.7E-50 T 01-11-2018 IPR036563 Molybdopterin biosynthesis MoaE subunit superfamily GO:0006777 KEGG: 00790+2.8.1.12|MetaCyc: PWY-6823|MetaCyc: PWY-7887|Reactome: R-HSA-947581 CDA09_13145 cb6fed7396742137df37d06caee9034d 150 Pfam PF02391 MoaE protein 6 119 2.6E-35 T 01-11-2018 IPR003448 Molybdopterin biosynthesis MoaE GO:0006777 KEGG: 00790+2.8.1.12|MetaCyc: PWY-6823|MetaCyc: PWY-7887|Reactome: R-HSA-947581 CDA09_00350 0f94a62f7c8b4255cd56978480e30b73 200 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 87 98 - T 01-11-2018 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site CDA09_00350 0f94a62f7c8b4255cd56978480e30b73 200 SUPERFAMILY SSF54862 1 181 3.66E-51 T 01-11-2018 CDA09_00350 0f94a62f7c8b4255cd56978480e30b73 200 Pfam PF13247 4Fe-4S dicluster domain 52 125 2.7E-10 T 01-11-2018 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain CDA09_00350 0f94a62f7c8b4255cd56978480e30b73 200 Gene3D G3DSA:3.30.70.20 5 174 8.0E-38 T 01-11-2018 CDA09_00350 0f94a62f7c8b4255cd56978480e30b73 200 Gene3D G3DSA:3.30.70.20 61 119 8.0E-38 T 01-11-2018 CDA09_02240 cbb1d13cc86b201f63da69c03f11dce1 174 SUPERFAMILY SSF88723 32 149 4.71E-9 T 01-11-2018 IPR029060 PIN-like domain superfamily CDA09_02240 cbb1d13cc86b201f63da69c03f11dce1 174 Pfam PF13470 PIN domain 32 144 5.4E-21 T 01-11-2018 IPR002716 PIN domain CDA09_21365 2f84c601c7c0118e1752d0d53746960f 622 Gene3D G3DSA:3.30.160.390 1 88 2.4E-30 T 01-11-2018 IPR038488 Integrase, DNA-binding domain superfamily CDA09_21365 2f84c601c7c0118e1752d0d53746960f 622 Pfam PF13356 Arm DNA-binding domain 3 87 1.3E-18 T 01-11-2018 IPR025166 Integrase, DNA-binding domain CDA09_21365 2f84c601c7c0118e1752d0d53746960f 622 Gene3D G3DSA:1.10.150.130 91 210 7.1E-24 T 01-11-2018 IPR010998 Integrase/recombinase, N-terminal CDA09_21365 2f84c601c7c0118e1752d0d53746960f 622 Gene3D G3DSA:1.10.443.10 212 402 7.1E-16 T 01-11-2018 IPR013762 Integrase-like, catalytic domain superfamily GO:0003677|GO:0006310|GO:0015074 CDA09_21365 2f84c601c7c0118e1752d0d53746960f 622 SUPERFAMILY SSF56349 98 401 4.41E-49 T 01-11-2018 IPR011010 DNA breaking-rejoining enzyme, catalytic core GO:0003677 CDA09_21365 2f84c601c7c0118e1752d0d53746960f 622 Pfam PF00589 Phage integrase family 212 391 2.4E-20 T 01-11-2018 IPR002104 Integrase, catalytic domain GO:0003677|GO:0006310|GO:0015074 CDA09_22515 69ce64131003a4619d318394379f0a0e 519 Pfam PF07690 Major Facilitator Superfamily 26 419 2.7E-55 T 01-11-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 CDA09_22515 69ce64131003a4619d318394379f0a0e 519 SUPERFAMILY SSF103473 9 507 7.59E-66 T 01-11-2018 IPR036259 MFS transporter superfamily CDA09_22515 69ce64131003a4619d318394379f0a0e 519 Gene3D G3DSA:1.20.1250.20 268 506 9.9E-14 T 01-11-2018 CDA09_22515 69ce64131003a4619d318394379f0a0e 519 TIGRFAM TIGR00711 efflux_EmrB: drug resistance MFS transporter, drug:H+ antiporter-2 (14 Spanner) (DHA2) family 22 502 6.1E-153 T 01-11-2018 IPR004638 Drug resistance transporter EmrB/QacA subfamily GO:0016021|GO:0022857|GO:0055085 CDA09_22515 69ce64131003a4619d318394379f0a0e 519 Gene3D G3DSA:1.20.1720.10 23 262 3.7E-45 T 01-11-2018 CDA09_12480 c1dc6525c549d1bb7c309eb189024822 522 Pfam PF13231 Dolichyl-phosphate-mannose-protein mannosyltransferase 69 227 2.4E-23 T 01-11-2018 IPR038731 Glycosyltransferase RgtA/B/C/D-like CDA09_09565 dd5f8825e4a86b25470eda8a70a81a96 819 SUPERFAMILY SSF82866 187 388 7.72E-27 T 01-11-2018 CDA09_09565 dd5f8825e4a86b25470eda8a70a81a96 819 Gene3D G3DSA:1.20.1640.10 211 398 1.9E-5 T 01-11-2018 CDA09_09565 dd5f8825e4a86b25470eda8a70a81a96 819 Pfam PF03176 MMPL family 559 779 6.2E-20 T 01-11-2018 IPR004869 Membrane transport protein MMPL domain GO:0016020 CDA09_09565 dd5f8825e4a86b25470eda8a70a81a96 819 Pfam PF03176 MMPL family 147 420 2.8E-10 T 01-11-2018 IPR004869 Membrane transport protein MMPL domain GO:0016020 CDA09_09565 dd5f8825e4a86b25470eda8a70a81a96 819 SUPERFAMILY SSF82866 567 777 5.89E-39 T 01-11-2018 CDA09_09565 dd5f8825e4a86b25470eda8a70a81a96 819 Gene3D G3DSA:1.20.1640.10 601 786 3.9E-20 T 01-11-2018 CDA09_00875 45ac8af806bbbdc37937173e0cf7af46 315 SUPERFAMILY SSF161098 13 305 2.49E-52 T 01-11-2018 IPR035906 MetI-like superfamily CDA09_00875 45ac8af806bbbdc37937173e0cf7af46 315 Gene3D G3DSA:1.10.3720.10 60 308 2.4E-55 T 01-11-2018 IPR035906 MetI-like superfamily CDA09_00875 45ac8af806bbbdc37937173e0cf7af46 315 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 114 299 5.1E-15 T 01-11-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 CDA09_16080 fd0bf870ac6a46b9a930041580cf199f 459 Pfam PF07044 Protein of unknown function (DUF1329) 88 454 5.8E-131 T 01-11-2018 IPR010752 Protein of unknown function DUF1329 CDA09_07000 a3fbecab54c52c970507ea78a4bff55d 142 Pfam PF01850 PIN domain 2 124 3.7E-8 T 01-11-2018 IPR002716 PIN domain CDA09_07000 a3fbecab54c52c970507ea78a4bff55d 142 Gene3D G3DSA:3.40.50.1010 1 136 1.5E-35 T 01-11-2018 CDA09_07000 a3fbecab54c52c970507ea78a4bff55d 142 SUPERFAMILY SSF88723 1 135 3.08E-25 T 01-11-2018 IPR029060 PIN-like domain superfamily CDA09_13035 41ba2724a8abd47e4869dcb570b9d8a4 304 Pfam PF08843 Nucleotidyl transferase AbiEii toxin, Type IV TA system 10 264 1.1E-42 T 01-11-2018 IPR014942 Nucleotidyl transferase AbiEii toxin, Type IV TA system CDA09_21400 1b9b4731209d25a05b10e0397cf24d76 115 Pfam PF05717 IS66 Orf2 like protein 9 106 1.3E-41 T 01-11-2018 IPR008878 Transposase IS66, Orf2 CDA09_17825 ba6a379ea7c7f0a24a1c0a59c342d755 745 Pfam PF00563 EAL domain 488 721 8.8E-71 T 01-11-2018 IPR001633 EAL domain CDA09_17825 ba6a379ea7c7f0a24a1c0a59c342d755 745 SUPERFAMILY SSF55073 324 471 2.35E-26 T 01-11-2018 IPR029787 Nucleotide cyclase CDA09_17825 ba6a379ea7c7f0a24a1c0a59c342d755 745 Pfam PF00990 Diguanylate cyclase, GGDEF domain 318 464 2.3E-20 T 01-11-2018 IPR000160 GGDEF domain CDA09_17825 ba6a379ea7c7f0a24a1c0a59c342d755 745 Gene3D G3DSA:3.40.50.2300 26 163 2.9E-8 T 01-11-2018 CDA09_17825 ba6a379ea7c7f0a24a1c0a59c342d755 745 SUPERFAMILY SSF141868 486 734 8.5E-84 T 01-11-2018 IPR035919 EAL domain superfamily CDA09_17825 ba6a379ea7c7f0a24a1c0a59c342d755 745 Gene3D G3DSA:3.30.70.270 311 482 1.3E-31 T 01-11-2018 CDA09_17825 ba6a379ea7c7f0a24a1c0a59c342d755 745 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 313 467 8.1E-18 T 01-11-2018 IPR000160 GGDEF domain CDA09_17825 ba6a379ea7c7f0a24a1c0a59c342d755 745 SMART SM00267 306 470 5.7E-20 T 01-11-2018 IPR000160 GGDEF domain CDA09_17825 ba6a379ea7c7f0a24a1c0a59c342d755 745 SUPERFAMILY SSF52172 21 159 1.28E-8 T 01-11-2018 IPR011006 CheY-like superfamily CDA09_17825 ba6a379ea7c7f0a24a1c0a59c342d755 745 Pfam PF11849 Domain of unknown function (DUF3369) 148 313 1.1E-45 T 01-11-2018 IPR021800 Domain of unknown function DUF3369 CDA09_17825 ba6a379ea7c7f0a24a1c0a59c342d755 745 Gene3D G3DSA:3.20.20.450 483 741 2.3E-91 T 01-11-2018 IPR035919 EAL domain superfamily CDA09_17825 ba6a379ea7c7f0a24a1c0a59c342d755 745 SMART SM00052 480 726 1.3E-100 T 01-11-2018 IPR001633 EAL domain CDA09_15590 6098ebaddf0331493281725423340380 329 Pfam PF13495 Phage integrase, N-terminal SAM-like domain 13 96 1.0E-23 T 01-11-2018 IPR004107 Integrase, SAM-like, N-terminal GO:0003677|GO:0015074 CDA09_15590 6098ebaddf0331493281725423340380 329 Gene3D G3DSA:1.10.150.130 10 97 5.6E-33 T 01-11-2018 IPR010998 Integrase/recombinase, N-terminal CDA09_15590 6098ebaddf0331493281725423340380 329 SUPERFAMILY SSF56349 108 325 8.54E-48 T 01-11-2018 IPR011010 DNA breaking-rejoining enzyme, catalytic core GO:0003677 CDA09_15590 6098ebaddf0331493281725423340380 329 Gene3D G3DSA:1.10.443.10 103 317 7.4E-66 T 01-11-2018 IPR013762 Integrase-like, catalytic domain superfamily GO:0003677|GO:0006310|GO:0015074 CDA09_15590 6098ebaddf0331493281725423340380 329 TIGRFAM TIGR02249 integrase_gron: integron integrase 13 328 6.8E-144 T 01-11-2018 IPR011946 Integrase, integron-type GO:0003677|GO:0006310|GO:0015074 CDA09_15590 6098ebaddf0331493281725423340380 329 Pfam PF00589 Phage integrase family 113 314 8.1E-47 T 01-11-2018 IPR002104 Integrase, catalytic domain GO:0003677|GO:0006310|GO:0015074 CDA09_07050 c5c6e6f45233f280f0ccda57380dfd9e 251 TIGRFAM TIGR01011 rpsB_bact: ribosomal protein uS2 3 225 2.1E-99 T 01-11-2018 IPR005706 Ribosomal protein S2, bacteria/mitochondria/plastid GO:0003735|GO:0006412|GO:0015935 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 CDA09_07050 c5c6e6f45233f280f0ccda57380dfd9e 251 PRINTS PR00395 Ribosomal protein S2 signature 36 45 2.8E-34 T 01-11-2018 IPR001865 Ribosomal protein S2 GO:0003735|GO:0005622|GO:0005840|GO:0006412 CDA09_07050 c5c6e6f45233f280f0ccda57380dfd9e 251 PRINTS PR00395 Ribosomal protein S2 signature 86 103 2.8E-34 T 01-11-2018 IPR001865 Ribosomal protein S2 GO:0003735|GO:0005622|GO:0005840|GO:0006412 CDA09_07050 c5c6e6f45233f280f0ccda57380dfd9e 251 PRINTS PR00395 Ribosomal protein S2 signature 5 23 2.8E-34 T 01-11-2018 IPR001865 Ribosomal protein S2 GO:0003735|GO:0005622|GO:0005840|GO:0006412 CDA09_07050 c5c6e6f45233f280f0ccda57380dfd9e 251 PRINTS PR00395 Ribosomal protein S2 signature 157 174 2.8E-34 T 01-11-2018 IPR001865 Ribosomal protein S2 GO:0003735|GO:0005622|GO:0005840|GO:0006412 CDA09_07050 c5c6e6f45233f280f0ccda57380dfd9e 251 PRINTS PR00395 Ribosomal protein S2 signature 174 185 2.8E-34 T 01-11-2018 IPR001865 Ribosomal protein S2 GO:0003735|GO:0005622|GO:0005840|GO:0006412 CDA09_07050 c5c6e6f45233f280f0ccda57380dfd9e 251 PRINTS PR00395 Ribosomal protein S2 signature 195 209 2.8E-34 T 01-11-2018 IPR001865 Ribosomal protein S2 GO:0003735|GO:0005622|GO:0005840|GO:0006412 CDA09_07050 c5c6e6f45233f280f0ccda57380dfd9e 251 Pfam PF00318 Ribosomal protein S2 8 223 6.7E-91 T 01-11-2018 IPR001865 Ribosomal protein S2 GO:0003735|GO:0005622|GO:0005840|GO:0006412 CDA09_07050 c5c6e6f45233f280f0ccda57380dfd9e 251 SUPERFAMILY SSF52313 5 230 7.72E-92 T 01-11-2018 IPR023591 Ribosomal protein S2, flavodoxin-like domain superfamily CDA09_07050 c5c6e6f45233f280f0ccda57380dfd9e 251 Hamap MF_00291_B 30S ribosomal protein S2 [rpsB]. 1 224 40.418 T 01-11-2018 IPR005706 Ribosomal protein S2, bacteria/mitochondria/plastid GO:0003735|GO:0006412|GO:0015935 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 CDA09_07050 c5c6e6f45233f280f0ccda57380dfd9e 251 Gene3D G3DSA:1.10.287.610 102 149 2.9E-86 T 01-11-2018 CDA09_07050 c5c6e6f45233f280f0ccda57380dfd9e 251 Gene3D G3DSA:3.40.50.10490 7 218 2.9E-86 T 01-11-2018 CDA09_14600 df5fe1405e790766904d444d21d1c853 473 SUPERFAMILY SSF50475 1 304 3.45E-84 T 01-11-2018 CDA09_14600 df5fe1405e790766904d444d21d1c853 473 Pfam PF01977 3-octaprenyl-4-hydroxybenzoate carboxy-lyase 7 413 1.2E-113 T 01-11-2018 IPR002830 UbiD decarboxylyase family GO:0016831 KEGG: 00130+4.1.1.98|MetaCyc: PWY-5855|MetaCyc: PWY-5856|MetaCyc: PWY-5857|MetaCyc: PWY-6708|MetaCyc: PWY-6978 CDA09_14600 df5fe1405e790766904d444d21d1c853 473 SUPERFAMILY SSF143968 308 471 3.27E-39 T 01-11-2018 CDA09_14600 df5fe1405e790766904d444d21d1c853 473 TIGRFAM TIGR00148 TIGR00148: decarboxylase, UbiD family 3 439 1.4E-94 T 01-11-2018 IPR002830 UbiD decarboxylyase family GO:0016831 KEGG: 00130+4.1.1.98|MetaCyc: PWY-5855|MetaCyc: PWY-5856|MetaCyc: PWY-5857|MetaCyc: PWY-6708|MetaCyc: PWY-6978 CDA09_14600 df5fe1405e790766904d444d21d1c853 473 Gene3D G3DSA:3.40.1670.10 321 440 1.9E-25 T 01-11-2018 CDA09_14600 df5fe1405e790766904d444d21d1c853 473 TIGRFAM TIGR02724 phenyl_P_beta: phenylphosphate carboxylase, beta subunit 1 471 0.0 T 01-11-2018 IPR014096 Phenylphosphate carboxylase, beta subunit CDA09_20675 1a0db9da603680da2222e1df7af85294 290 Gene3D G3DSA:3.30.1150.10 176 289 3.4E-24 T 01-11-2018 CDA09_20675 1a0db9da603680da2222e1df7af85294 290 SUPERFAMILY SSF74653 199 286 6.93E-15 T 01-11-2018 CDA09_20675 1a0db9da603680da2222e1df7af85294 290 Pfam PF13103 TonB C terminal 202 285 1.0E-18 T 01-11-2018 CDA09_22935 cd35506673175391dcfc4bb16dd053b9 228 Gene3D G3DSA:1.10.4190.10 3 205 6.9E-55 T 01-11-2018 IPR038277 UreF domain superfamily CDA09_22935 cd35506673175391dcfc4bb16dd053b9 228 Hamap MF_01385 Urease accessory protein UreF [ureF]. 3 228 33.445 T 01-11-2018 IPR002639 Urease accessory protein UreF GO:0006807|GO:0016151 CDA09_22935 cd35506673175391dcfc4bb16dd053b9 228 Pfam PF01730 UreF 35 185 3.0E-42 T 01-11-2018 IPR002639 Urease accessory protein UreF GO:0006807|GO:0016151 CDA09_22935 cd35506673175391dcfc4bb16dd053b9 228 PIRSF PIRSF009467 1 228 2.1E-63 T 01-11-2018 IPR002639 Urease accessory protein UreF GO:0006807|GO:0016151 CDA09_08160 30a39b49f06df97d57847112866ad118 359 TIGRFAM TIGR04407 LptF_YjgP: LPS export ABC transporter permease LptF 2 347 3.7E-115 T 01-11-2018 IPR030922 LPS export ABC transporter permease LptF GO:0043190|GO:0055085 CDA09_08160 30a39b49f06df97d57847112866ad118 359 Pfam PF03739 Predicted permease YjgP/YjgQ family 7 347 3.1E-58 T 01-11-2018 IPR005495 Permease LptG/LptF-related GO:0016021 CDA09_05330 dea4720131d13949ec3b676c7d7fac1e 446 Gene3D G3DSA:3.30.2290.10 5 232 4.8E-92 T 01-11-2018 IPR035068 Metalloprotease TldD/PmbA, N-terminal CDA09_05330 dea4720131d13949ec3b676c7d7fac1e 446 SUPERFAMILY SSF111283 12 445 6.8E-134 T 01-11-2018 IPR036059 Metalloprotease TldD/PmbA superfamily GO:0006508|GO:0008237 CDA09_05330 dea4720131d13949ec3b676c7d7fac1e 446 Pfam PF01523 Putative modulator of DNA gyrase 33 323 5.1E-65 T 01-11-2018 IPR002510 Metalloprotease TldD/PmbA GO:0006508|GO:0008237 CDA09_16925 444cfde312e2f5224470a362968da73e 337 Pfam PF16074 Type IV Pilus-assembly protein W 208 328 3.8E-23 T 01-11-2018 IPR032092 Type IV Pilus-assembly protein W GO:0043683 CDA09_21730 162bbf7e9838da25096e47ee47ab8620 263 Pfam PF00378 Enoyl-CoA hydratase/isomerase 10 263 4.4E-63 T 01-11-2018 IPR001753 Enoyl-CoA hydratase/isomerase GO:0003824 CDA09_21730 162bbf7e9838da25096e47ee47ab8620 263 Gene3D G3DSA:3.90.226.10 3 205 1.3E-67 T 01-11-2018 CDA09_21730 162bbf7e9838da25096e47ee47ab8620 263 SUPERFAMILY SSF52096 3 263 3.22E-83 T 01-11-2018 IPR029045 ClpP/crotonase-like domain superfamily CDA09_21730 162bbf7e9838da25096e47ee47ab8620 263 Gene3D G3DSA:1.10.12.10 208 263 8.5E-18 T 01-11-2018 IPR014748 Enoyl-CoA hydratase, C-terminal CDA09_16140 3d88abf0b4cc8c197ab14917e868f251 184 Gene3D G3DSA:3.40.50.700 8 183 4.6E-38 T 01-11-2018 IPR037024 [NiFe]-hydrogenase, small subunit, N-terminal domain superfamily CDA09_16140 3d88abf0b4cc8c197ab14917e868f251 184 Pfam PF01058 NADH ubiquinone oxidoreductase, 20 Kd subunit 20 167 9.1E-31 T 01-11-2018 IPR006137 NADH:ubiquinone oxidoreductase-like, 20kDa subunit GO:0051536|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 CDA09_16140 3d88abf0b4cc8c197ab14917e868f251 184 SUPERFAMILY SSF56770 9 183 5.36E-40 T 01-11-2018 CDA09_20090 a298a356f05f6a57fc3bc783349f6c03 243 Gene3D G3DSA:3.40.50.150 58 224 7.5E-20 T 01-11-2018 CDA09_20090 a298a356f05f6a57fc3bc783349f6c03 243 Pfam PF13649 Methyltransferase domain 77 173 1.5E-8 T 01-11-2018 CDA09_20090 a298a356f05f6a57fc3bc783349f6c03 243 SUPERFAMILY SSF53335 61 219 1.06E-20 T 01-11-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase CDA09_00520 a8932e8d28d88d02630c6fca8cd32384 140 Gene3D G3DSA:3.30.2020.30 3 102 9.8E-28 T 01-11-2018 IPR038492 GBBH-like, N-terminal domain superfamily Reactome: R-HSA-71262 CDA09_00520 a8932e8d28d88d02630c6fca8cd32384 140 Pfam PF06155 Protein of unknown function (DUF971) 15 98 9.8E-30 T 01-11-2018 IPR010376 Gamma-butyrobetaine hydroxylase-like, N-terminal Reactome: R-HSA-71262 CDA09_07515 6038aaad36ca5eff914092b123f133d9 190 Pfam PF13526 Protein of unknown function (DUF4125) 4 181 5.6E-56 T 01-11-2018 IPR025191 Protein of unknown function DUF4125 CDA09_21910 6038aaad36ca5eff914092b123f133d9 190 Pfam PF13526 Protein of unknown function (DUF4125) 4 181 5.6E-56 T 01-11-2018 IPR025191 Protein of unknown function DUF4125 CDA09_08510 61947ee929889a00dc2c87b781e125f6 235 Gene3D G3DSA:3.40.50.300 1 233 2.1E-55 T 01-11-2018 CDA09_08510 61947ee929889a00dc2c87b781e125f6 235 SUPERFAMILY SSF52540 4 227 4.86E-55 T 01-11-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CDA09_08510 61947ee929889a00dc2c87b781e125f6 235 SMART SM00382 29 209 3.1E-8 T 01-11-2018 IPR003593 AAA+ ATPase domain CDA09_08510 61947ee929889a00dc2c87b781e125f6 235 ProSitePatterns PS00211 ABC transporters family signature. 132 146 - T 01-11-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 CDA09_08510 61947ee929889a00dc2c87b781e125f6 235 Pfam PF00005 ABC transporter 20 159 2.5E-28 T 01-11-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 CDA09_06540 bcfcddd2d218fd533553d0bd6f707c2c 559 SUPERFAMILY SSF47090 473 544 2.15E-10 T 01-11-2018 IPR036365 PGBD-like superfamily CDA09_06540 bcfcddd2d218fd533553d0bd6f707c2c 559 Pfam PF13401 AAA domain 42 172 2.0E-23 T 01-11-2018 IPR003593 AAA+ ATPase domain CDA09_06540 bcfcddd2d218fd533553d0bd6f707c2c 559 SMART SM00382 42 273 1.2E-7 T 01-11-2018 IPR003593 AAA+ ATPase domain CDA09_06540 bcfcddd2d218fd533553d0bd6f707c2c 559 Pfam PF01471 Putative peptidoglycan binding domain 485 540 9.7E-7 T 01-11-2018 IPR002477 Peptidoglycan binding-like CDA09_06540 bcfcddd2d218fd533553d0bd6f707c2c 559 Gene3D G3DSA:1.10.101.10 473 543 2.0E-45 T 01-11-2018 IPR036366 PGBD superfamily Reactome: R-HSA-1442490|Reactome: R-HSA-1474228 CDA09_06540 bcfcddd2d218fd533553d0bd6f707c2c 559 Gene3D G3DSA:3.90.70.10 370 472 2.0E-45 T 01-11-2018 CDA09_06540 bcfcddd2d218fd533553d0bd6f707c2c 559 Gene3D G3DSA:3.40.50.300 26 186 4.9E-15 T 01-11-2018 CDA09_06540 bcfcddd2d218fd533553d0bd6f707c2c 559 SUPERFAMILY SSF52540 5 264 3.37E-40 T 01-11-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CDA09_06860 4088131a63d2a050c349c21defe324f2 105 Gene3D G3DSA:3.40.1690.10 10 90 1.7E-24 T 01-11-2018 IPR029025 Type III secretion system substrate exporter, C-terminal CDA09_06860 4088131a63d2a050c349c21defe324f2 105 Pfam PF01312 FlhB HrpN YscU SpaS Family 9 85 3.1E-19 T 01-11-2018 IPR006135 Type III secretion system substrate exporter GO:0009306|GO:0016020 CDA09_06860 4088131a63d2a050c349c21defe324f2 105 SUPERFAMILY SSF160544 8 89 1.44E-24 T 01-11-2018 IPR029025 Type III secretion system substrate exporter, C-terminal CDA09_06560 3ff28d91da243a1bcf8537d7e5320e16 212 SUPERFAMILY SSF52833 1 84 1.97E-14 T 01-11-2018 IPR036249 Thioredoxin-like superfamily CDA09_06560 3ff28d91da243a1bcf8537d7e5320e16 212 Gene3D G3DSA:1.20.1050.10 80 210 1.1E-32 T 01-11-2018 CDA09_06560 3ff28d91da243a1bcf8537d7e5320e16 212 Pfam PF13417 Glutathione S-transferase, N-terminal domain 3 74 1.9E-18 T 01-11-2018 IPR004045 Glutathione S-transferase, N-terminal GO:0005515 CDA09_06560 3ff28d91da243a1bcf8537d7e5320e16 212 Gene3D G3DSA:3.40.30.10 1 76 4.3E-16 T 01-11-2018 CDA09_01685 f2d8ad72e6b96111f6beaa417113626d 154 TIGRFAM TIGR02286 PaaD: phenylacetic acid degradation protein PaaD 34 146 5.3E-51 T 01-11-2018 IPR011973 Phenylacetic acid degradation protein PaaD GO:0016790 CDA09_01685 f2d8ad72e6b96111f6beaa417113626d 154 TIGRFAM TIGR00369 unchar_dom_1: uncharacterized domain 1 35 144 9.5E-24 T 01-11-2018 IPR003736 Phenylacetic acid degradation-related domain Reactome: R-HSA-77289 CDA09_01685 f2d8ad72e6b96111f6beaa417113626d 154 Gene3D G3DSA:3.10.129.10 17 153 6.8E-49 T 01-11-2018 CDA09_01685 f2d8ad72e6b96111f6beaa417113626d 154 SUPERFAMILY SSF54637 13 141 1.56E-29 T 01-11-2018 IPR029069 HotDog domain superfamily CDA09_01685 f2d8ad72e6b96111f6beaa417113626d 154 Pfam PF03061 Thioesterase superfamily 64 136 1.8E-12 T 01-11-2018 IPR006683 Thioesterase domain Reactome: R-HSA-77289 CDA09_10935 5a7f5f0bda7167f5ce6dd8086dd3fa12 288 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 106 263 2.9E-25 T 01-11-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 CDA09_10935 5a7f5f0bda7167f5ce6dd8086dd3fa12 288 Gene3D G3DSA:1.10.3720.10 79 269 8.1E-35 T 01-11-2018 IPR035906 MetI-like superfamily CDA09_10935 5a7f5f0bda7167f5ce6dd8086dd3fa12 288 SUPERFAMILY SSF161098 83 267 5.63E-42 T 01-11-2018 IPR035906 MetI-like superfamily CDA09_13095 9b4b88be7ab77247e62c22fb88723382 145 Pfam PF03364 Polyketide cyclase / dehydrase and lipid transport 10 134 3.5E-28 T 01-11-2018 IPR005031 Coenzyme Q-binding protein COQ10, START domain Reactome: R-HSA-611105 CDA09_13095 9b4b88be7ab77247e62c22fb88723382 145 Gene3D G3DSA:3.30.530.20 2 143 3.0E-33 T 01-11-2018 IPR023393 START-like domain superfamily CDA09_13095 9b4b88be7ab77247e62c22fb88723382 145 SUPERFAMILY SSF55961 1 142 9.02E-32 T 01-11-2018 CDA09_01905 647155f71e5c2e4f259a4bbf2651f2e9 373 Gene3D G3DSA:2.130.10.10 1 371 8.3E-144 T 01-11-2018 IPR015943 WD40/YVTN repeat-like-containing domain superfamily GO:0005515 CDA09_01905 647155f71e5c2e4f259a4bbf2651f2e9 373 SUPERFAMILY SSF110296 3 368 2.09E-58 T 01-11-2018 CDA09_03540 3eedc6e7f474353ed4bcb12e8fabeb0e 256 Pfam PF01925 Sulfite exporter TauE/SafE 11 250 9.3E-34 T 01-11-2018 IPR002781 Transmembrane protein TauE-like GO:0016021 CDA09_14440 72577e531a676991e8052ed43e16ba3c 277 TIGRFAM TIGR03464 HpnC: squalene synthase HpnC 2 271 1.1E-112 T 01-11-2018 IPR017827 Hydroxysqualene synthase HpnC MetaCyc: PWY-7072 CDA09_14440 72577e531a676991e8052ed43e16ba3c 277 SUPERFAMILY SSF48576 4 273 2.88E-73 T 01-11-2018 IPR008949 Isoprenoid synthase domain superfamily CDA09_14440 72577e531a676991e8052ed43e16ba3c 277 Pfam PF00494 Squalene/phytoene synthase 5 261 6.2E-64 T 01-11-2018 CDA09_14440 72577e531a676991e8052ed43e16ba3c 277 Gene3D G3DSA:1.10.600.10 2 252 1.8E-82 T 01-11-2018 IPR008949 Isoprenoid synthase domain superfamily CDA09_13045 564fb4caa9a1b2f243fe8e567c352f5a 392 Pfam PF11795 Uncharacterized protein conserved in bacteria N-term (DUF3322) 6 186 1.2E-57 T 01-11-2018 IPR024537 Domain of unknown function DUF3322 CDA09_13045 564fb4caa9a1b2f243fe8e567c352f5a 392 Pfam PF09983 Uncharacterized protein conserved in bacteria C-term(DUF2220) 209 387 9.0E-60 T 01-11-2018 IPR024534 Domain of unknown function DUF2220 CDA09_13045 564fb4caa9a1b2f243fe8e567c352f5a 392 PIRSF PIRSF028408 1 392 4.9E-88 T 01-11-2018 IPR014544 Uncharacterised conserved protein UCP028408 CDA09_17490 e83549a2deb6a3ca707d55fc1e0c4d31 168 Gene3D G3DSA:3.30.70.3460 28 168 2.2E-35 T 01-11-2018 CDA09_00360 b725c55a2e83f4ef48ad1c7f95e96d2d 334 Pfam PF01292 Prokaryotic cytochrome b561 129 305 4.7E-20 T 01-11-2018 IPR011577 Cytochrome b561, bacterial/Ni-hydrogenase GO:0009055|GO:0016021 CDA09_00360 b725c55a2e83f4ef48ad1c7f95e96d2d 334 SUPERFAMILY SSF81342 123 329 7.85E-41 T 01-11-2018 IPR016174 Di-haem cytochrome, transmembrane GO:0016020|GO:0022904 Reactome: R-HSA-611105 CDA09_00360 b725c55a2e83f4ef48ad1c7f95e96d2d 334 Gene3D G3DSA:1.20.950.20 123 333 3.5E-62 T 01-11-2018 CDA09_00360 b725c55a2e83f4ef48ad1c7f95e96d2d 334 TIGRFAM TIGR01583 formate-DH-gamm: formate dehydrogenase, gamma subunit 126 327 3.1E-54 T 01-11-2018 IPR006471 Formate dehydrogenase, gamma subunit GO:0008863|GO:0009326|GO:0016021|GO:0045333 CDA09_07440 e7f3a00fac65cdcefe57a82927edb259 410 Gene3D G3DSA:3.30.1540.10 228 333 7.8E-92 T 01-11-2018 CDA09_07440 e7f3a00fac65cdcefe57a82927edb259 410 Gene3D G3DSA:3.40.50.10540 8 399 7.8E-92 T 01-11-2018 IPR023606 CoA-transferase family III domain superfamily CDA09_07440 e7f3a00fac65cdcefe57a82927edb259 410 SUPERFAMILY SSF89796 6 405 6.93E-91 T 01-11-2018 IPR023606 CoA-transferase family III domain superfamily CDA09_07440 e7f3a00fac65cdcefe57a82927edb259 410 Pfam PF02515 CoA-transferase family III 8 382 1.5E-76 T 01-11-2018 IPR003673 CoA-transferase family III GO:0003824 CDA09_14505 4a1c12fb9db6b3722d55cd09434c71a6 282 Gene3D G3DSA:2.70.98.10 1 281 2.6E-86 T 01-11-2018 IPR014718 Glycoside hydrolase-type carbohydrate-binding GO:0030246 CDA09_14505 4a1c12fb9db6b3722d55cd09434c71a6 282 Pfam PF01263 Aldose 1-epimerase 17 278 7.2E-42 T 01-11-2018 IPR008183 Aldose 1-/Glucose-6-phosphate 1-epimerase GO:0005975|GO:0016853 CDA09_14505 4a1c12fb9db6b3722d55cd09434c71a6 282 SUPERFAMILY SSF74650 3 279 3.01E-64 T 01-11-2018 IPR011013 Galactose mutarotase-like domain superfamily GO:0003824|GO:0005975|GO:0030246 CDA09_14505 4a1c12fb9db6b3722d55cd09434c71a6 282 PIRSF PIRSF016020 4 282 5.9E-61 T 01-11-2018 IPR025532 Glucose-6-phosphate 1-epimerase KEGG: 00010+5.1.3.15 CDA09_10860 54df0e6f0a12de74f7f968e56db7b623 139 SUPERFAMILY SSF52172 1 124 4.13E-29 T 01-11-2018 IPR011006 CheY-like superfamily CDA09_10860 54df0e6f0a12de74f7f968e56db7b623 139 SMART SM00448 4 121 2.5E-25 T 01-11-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 CDA09_10860 54df0e6f0a12de74f7f968e56db7b623 139 Pfam PF00072 Response regulator receiver domain 6 121 2.9E-19 T 01-11-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 CDA09_10860 54df0e6f0a12de74f7f968e56db7b623 139 Gene3D G3DSA:3.40.50.2300 1 137 1.7E-30 T 01-11-2018 CDA09_02150 4b41bd322297061610d0bb590f039ad3 509 SUPERFAMILY SSF56112 89 427 1.95E-48 T 01-11-2018 IPR011009 Protein kinase-like domain superfamily CDA09_02150 4b41bd322297061610d0bb590f039ad3 509 Pfam PF03109 ABC1 family 109 225 4.6E-34 T 01-11-2018 IPR004147 UbiB domain CDA09_02150 4b41bd322297061610d0bb590f039ad3 509 TIGRFAM TIGR01982 UbiB: 2-polyprenylphenol 6-hydroxylase 3 433 1.5E-178 T 01-11-2018 IPR010232 Probable protein kinase UbiB GO:0006744 CDA09_02150 4b41bd322297061610d0bb590f039ad3 509 Hamap MF_00414 Probable protein kinase UbiB [ubiB]. 1 506 50.067 T 01-11-2018 IPR010232 Probable protein kinase UbiB GO:0006744 CDA09_02150 4b41bd322297061610d0bb590f039ad3 509 Gene3D G3DSA:1.10.510.10 271 394 1.5E-5 T 01-11-2018 CDA09_02200 be701f8482855ff27a06129e0cc6424f 122 Pfam PF17195 Protein of unknown function (DUF5132) 86 119 4.3E-6 T 01-11-2018 IPR033456 Protein of unknown function DUF5132 CDA09_05225 7aa56d63484f45043f71e0e59dd83be0 216 Gene3D G3DSA:3.40.50.300 3 198 9.2E-51 T 01-11-2018 CDA09_05225 7aa56d63484f45043f71e0e59dd83be0 216 SUPERFAMILY SSF52540 20 195 4.5E-34 T 01-11-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CDA09_05225 7aa56d63484f45043f71e0e59dd83be0 216 Pfam PF01926 50S ribosome-binding GTPase 26 144 3.0E-17 T 01-11-2018 IPR006073 GTP binding domain GO:0005525 CDA09_05225 7aa56d63484f45043f71e0e59dd83be0 216 Hamap MF_00321 Probable GTP-binding protein EngB [engB]. 12 195 26.666 T 01-11-2018 IPR019987 GTP-binding protein, ribosome biogenesis, YsxC GO:0005525 CDA09_05225 7aa56d63484f45043f71e0e59dd83be0 216 TIGRFAM TIGR03598 GTPase_YsxC: ribosome biogenesis GTP-binding protein YsxC 7 191 3.3E-70 T 01-11-2018 IPR019987 GTP-binding protein, ribosome biogenesis, YsxC GO:0005525 CDA09_09865 16615ef96854e6abf9fde1c5fb66792d 343 SUPERFAMILY SSF52096 164 343 6.28E-44 T 01-11-2018 IPR029045 ClpP/crotonase-like domain superfamily CDA09_09865 16615ef96854e6abf9fde1c5fb66792d 343 Pfam PF00378 Enoyl-CoA hydratase/isomerase 176 342 2.5E-27 T 01-11-2018 IPR001753 Enoyl-CoA hydratase/isomerase GO:0003824 CDA09_09865 16615ef96854e6abf9fde1c5fb66792d 343 Gene3D G3DSA:3.90.226.10 157 343 5.5E-47 T 01-11-2018 CDA09_16610 a8b5f28ef88bcafb0a911effed539373 311 Pfam PF03547 Membrane transport protein 5 148 2.5E-17 T 01-11-2018 IPR004776 Membrane transport protein GO:0016021|GO:0055085 CDA09_16610 a8b5f28ef88bcafb0a911effed539373 311 Pfam PF03547 Membrane transport protein 163 303 5.5E-15 T 01-11-2018 IPR004776 Membrane transport protein GO:0016021|GO:0055085 CDA09_19630 e1002e5b27136fb1d76e47553b700f75 237 SUPERFAMILY SSF52540 1 199 6.37E-13 T 01-11-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CDA09_19630 e1002e5b27136fb1d76e47553b700f75 237 Gene3D G3DSA:3.40.50.300 44 203 4.6E-5 T 01-11-2018 CDA09_19630 e1002e5b27136fb1d76e47553b700f75 237 Gene3D G3DSA:3.40.50.300 1 43 4.2E-6 T 01-11-2018 CDA09_01595 8233bc1c97613f89da96ae77168b59fb 104 Gene3D G3DSA:1.10.238.10 39 101 2.2E-12 T 01-11-2018 CDA09_01595 8233bc1c97613f89da96ae77168b59fb 104 SUPERFAMILY SSF47473 44 97 4.38E-13 T 01-11-2018 IPR011992 EF-hand domain pair CDA09_01595 8233bc1c97613f89da96ae77168b59fb 104 ProSitePatterns PS00018 EF-hand calcium-binding domain. 57 69 - T 01-11-2018 IPR018247 EF-Hand 1, calcium-binding site CDA09_01595 8233bc1c97613f89da96ae77168b59fb 104 ProSitePatterns PS00018 EF-hand calcium-binding domain. 83 95 - T 01-11-2018 IPR018247 EF-Hand 1, calcium-binding site CDA09_01595 8233bc1c97613f89da96ae77168b59fb 104 Pfam PF13202 EF hand 52 68 1.8E-5 T 01-11-2018 IPR002048 EF-hand domain GO:0005509 CDA09_01595 8233bc1c97613f89da96ae77168b59fb 104 Pfam PF13202 EF hand 79 95 1.9E-5 T 01-11-2018 IPR002048 EF-hand domain GO:0005509 CDA09_21680 f8542c7ede9e8b947481662c282f68be 305 TIGRFAM TIGR03749 conj_TIGR03749: integrating conjugative element protein, PFL_4704 family 15 275 3.0E-109 T 01-11-2018 IPR021844 Integrating conjugative element protein, PFL4704 CDA09_21680 f8542c7ede9e8b947481662c282f68be 305 Pfam PF11920 Protein of unknown function (DUF3438) 11 284 1.6E-121 T 01-11-2018 IPR021844 Integrating conjugative element protein, PFL4704 CDA09_12730 77c156f00710edb0724b3a77ff436e8e 202 Hamap MF_00189 Probable intracellular septation protein A [yciB]. 1 200 19.115 T 01-11-2018 IPR006008 Intracellular septation protein A GO:0016021 CDA09_12730 77c156f00710edb0724b3a77ff436e8e 202 TIGRFAM TIGR00997 ispZ: intracellular septation protein A 1 201 2.1E-55 T 01-11-2018 IPR006008 Intracellular septation protein A GO:0016021 CDA09_12730 77c156f00710edb0724b3a77ff436e8e 202 Pfam PF04279 Intracellular septation protein A 1 199 7.6E-71 T 01-11-2018 IPR006008 Intracellular septation protein A GO:0016021 CDA09_22910 173108c478c79fd468f1c07e2f6041ea 373 Pfam PF00374 Nickel-dependent hydrogenase 278 362 1.4E-7 T 01-11-2018 IPR001501 Nickel-dependent hydrogenase, large subunit GO:0016151 CDA09_22910 173108c478c79fd468f1c07e2f6041ea 373 Gene3D G3DSA:1.10.645.10 200 365 1.5E-20 T 01-11-2018 IPR029014 [NiFe]-hydrogenase, large subunit Reactome: R-HSA-611105|Reactome: R-HSA-6799198 CDA09_22910 173108c478c79fd468f1c07e2f6041ea 373 SUPERFAMILY SSF56762 34 363 5.89E-35 T 01-11-2018 IPR029014 [NiFe]-hydrogenase, large subunit Reactome: R-HSA-611105|Reactome: R-HSA-6799198 CDA09_22310 85926992551ffcfc8da2cfe8643ca7f1 193 Gene3D G3DSA:1.10.760.10 77 189 2.1E-6 T 01-11-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 CDA09_15140 96683ee92d69f2b1ea54acab65595587 459 TIGRFAM TIGR02783 TrbL_P: P-type conjugative transfer protein TrbL 2 305 2.8E-60 T 01-11-2018 IPR014150 Conjugal transfer, TrbL CDA09_15140 96683ee92d69f2b1ea54acab65595587 459 Pfam PF04610 TrbL/VirB6 plasmid conjugal transfer protein 38 256 7.0E-51 T 01-11-2018 IPR007688 Plasmid conjugal transfer TrbL/VirB6 GO:0030255 CDA09_13365 78ec865690e4b4024188c5e7beb8e971 96 Gene3D G3DSA:1.10.1200.10 16 96 3.2E-17 T 01-11-2018 IPR036736 ACP-like superfamily CDA09_13365 78ec865690e4b4024188c5e7beb8e971 96 Pfam PF00550 Phosphopantetheine attachment site 19 89 3.9E-7 T 01-11-2018 IPR009081 Phosphopantetheine binding ACP domain CDA09_13365 78ec865690e4b4024188c5e7beb8e971 96 SUPERFAMILY SSF47336 10 93 1.57E-10 T 01-11-2018 IPR036736 ACP-like superfamily CDA09_12575 e891ec8f5d1c66eec06f5624754972f2 87 SUPERFAMILY SSF57652 28 86 1.96E-17 T 01-11-2018 IPR036369 High potential iron-sulphur protein superfamily GO:0009055|GO:0019646 CDA09_12575 e891ec8f5d1c66eec06f5624754972f2 87 Pfam PF01355 High potential iron-sulfur protein 38 84 4.2E-7 T 01-11-2018 IPR000170 High potential iron-sulphur protein GO:0009055|GO:0019646 CDA09_12575 e891ec8f5d1c66eec06f5624754972f2 87 Gene3D G3DSA:4.10.490.10 27 87 5.4E-20 T 01-11-2018 IPR036369 High potential iron-sulphur protein superfamily GO:0009055|GO:0019646 CDA09_11985 3b61a1b05b45a4d938b2480795db4b66 393 SUPERFAMILY SSF46626 199 370 1.04E-28 T 01-11-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 CDA09_11985 3b61a1b05b45a4d938b2480795db4b66 393 Gene3D G3DSA:1.10.760.10 208 373 6.9E-72 T 01-11-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 CDA09_11985 3b61a1b05b45a4d938b2480795db4b66 393 PIRSF PIRSF000294 26 389 6.1E-73 T 01-11-2018 IPR026259 Di-c-type haem protein, MauG/cytochrome c peroxidase GO:0016491|GO:0020037|GO:0055114 CDA09_11985 3b61a1b05b45a4d938b2480795db4b66 393 Gene3D G3DSA:1.10.760.10 70 207 6.9E-72 T 01-11-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 CDA09_11985 3b61a1b05b45a4d938b2480795db4b66 393 Pfam PF03150 Di-haem cytochrome c peroxidase 73 221 1.0E-32 T 01-11-2018 IPR004852 Di-haem cytochrome c peroxidase GO:0016491|GO:0055114 CDA09_11985 3b61a1b05b45a4d938b2480795db4b66 393 SUPERFAMILY SSF46626 57 208 6.24E-31 T 01-11-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 CDA09_15135 2d2e58cc68f377b88a3f385995611882 242 SUPERFAMILY SSF101082 26 204 5.62E-5 T 01-11-2018 CDA09_15135 2d2e58cc68f377b88a3f385995611882 242 TIGRFAM TIGR02780 TrbJ_Ti: P-type conjugative transfer protein TrbJ 3 240 1.0E-67 T 01-11-2018 IPR014147 Type IV conjugative transfer protein TrbJ CDA09_15135 2d2e58cc68f377b88a3f385995611882 242 Pfam PF13605 Domain of unknown function (DUF4141) 6 40 1.0E-10 T 01-11-2018 IPR025415 Protein of unknown function DUF4141 CDA09_03515 a6c6b44122815ff1fc01932ebedb01b5 119 Pfam PF03788 LrgA family 12 104 3.5E-28 T 01-11-2018 IPR005538 LrgA/CidA family GO:0016021 CDA09_10735 38f5a0938b616f585f8ff35ec1898753 297 Pfam PF13557 Putative MetA-pathway of phenol degradation 73 266 4.6E-13 T 01-11-2018 IPR025737 MetA-pathway of phenol degradation, putative CDA09_12525 23f3ff9774b4bc132941b08cdcbd8816 277 Hamap MF_01062 Phosphoenolpyruvate synthase regulatory protein [ppsR]. 6 276 75.03 T 01-11-2018 IPR026530 Phosphoenolpyruvate synthase regulatory protein CDA09_12525 23f3ff9774b4bc132941b08cdcbd8816 277 Pfam PF03618 Kinase/pyrophosphorylase 9 267 1.4E-77 T 01-11-2018 IPR005177 Bifunctional kinase-pyrophosphorylase GO:0005524|GO:0016772 CDA09_00290 f4d32788e04f4f926c261dc9869ce1e1 169 TIGRFAM TIGR00176 mobB: molybdopterin-guanine dinucleotide biosynthesis protein B 3 158 9.9E-50 T 01-11-2018 IPR004435 Molybdopterin-guanine dinucleotide biosynthesis protein B (MobB) domain GO:0005525|GO:0006777 CDA09_00290 f4d32788e04f4f926c261dc9869ce1e1 169 Pfam PF03205 Molybdopterin guanine dinucleotide synthesis protein B 3 135 2.3E-51 T 01-11-2018 IPR004435 Molybdopterin-guanine dinucleotide biosynthesis protein B (MobB) domain GO:0005525|GO:0006777 CDA09_00290 f4d32788e04f4f926c261dc9869ce1e1 169 Gene3D G3DSA:2.20.25.120 47 79 2.0E-58 T 01-11-2018 CDA09_00290 f4d32788e04f4f926c261dc9869ce1e1 169 Gene3D G3DSA:3.40.50.300 4 157 2.0E-58 T 01-11-2018 CDA09_00290 f4d32788e04f4f926c261dc9869ce1e1 169 SUPERFAMILY SSF52540 2 160 2.28E-24 T 01-11-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CDA09_03970 2bd925ad43da8c30138c3a44f76fd175 77 Pfam PF10982 Protein of unknown function (DUF2789) 1 75 5.3E-33 T 01-11-2018 IPR021250 Protein of unknown function DUF2789 CDA09_03970 2bd925ad43da8c30138c3a44f76fd175 77 Gene3D G3DSA:1.10.10.1130 1 77 3.2E-32 T 01-11-2018 CDA09_18360 cf980113b980bef86d64cfe0084a1709 230 SUPERFAMILY SSF53448 2 226 7.39E-30 T 01-11-2018 IPR029044 Nucleotide-diphospho-sugar transferases CDA09_18360 cf980113b980bef86d64cfe0084a1709 230 Gene3D G3DSA:3.90.550.10 2 206 1.2E-22 T 01-11-2018 IPR029044 Nucleotide-diphospho-sugar transferases CDA09_18360 cf980113b980bef86d64cfe0084a1709 230 Pfam PF13632 Glycosyl transferase family group 2 138 225 1.2E-6 T 01-11-2018 IPR001173 Glycosyltransferase 2-like Reactome: R-HSA-913709 CDA09_07270 0f1698a8c3e9286651e07b2c7d8b6fab 516 Pfam PF14711 Respiratory nitrate reductase beta C-terminal 357 437 4.1E-28 T 01-11-2018 IPR029263 Respiratory nitrate reductase beta, C-terminal KEGG: 00910+1.7.5.1|MetaCyc: PWY-6748 CDA09_07270 0f1698a8c3e9286651e07b2c7d8b6fab 516 SUPERFAMILY SSF54862 1 493 3.35E-165 T 01-11-2018 CDA09_07270 0f1698a8c3e9286651e07b2c7d8b6fab 516 Gene3D G3DSA:3.30.70.20 1 294 1.2E-95 T 01-11-2018 CDA09_07270 0f1698a8c3e9286651e07b2c7d8b6fab 516 TIGRFAM TIGR01660 narH: nitrate reductase, beta subunit 1 486 3.6E-258 T 01-11-2018 IPR006547 Nitrate reductase, beta subunit GO:0008940|GO:0009325|GO:0042126|GO:0055114 KEGG: 00910+1.7.5.1|MetaCyc: PWY-6748 CDA09_07270 0f1698a8c3e9286651e07b2c7d8b6fab 516 Gene3D G3DSA:1.10.3650.10 357 435 5.1E-27 T 01-11-2018 IPR038262 Nitrate reductase beta, C-terminal domain superfamily KEGG: 00910+1.7.5.1|MetaCyc: PWY-6748 CDA09_07270 0f1698a8c3e9286651e07b2c7d8b6fab 516 Pfam PF13247 4Fe-4S dicluster domain 174 269 7.3E-36 T 01-11-2018 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain CDA09_16905 0836966c4b713fee8530f67a9538039f 342 Pfam PF06580 Histidine kinase 146 224 5.9E-22 T 01-11-2018 IPR010559 Signal transduction histidine kinase, internal region GO:0000155|GO:0000160|GO:0016021 CDA09_16905 0836966c4b713fee8530f67a9538039f 342 SUPERFAMILY SSF55874 200 283 1.97E-7 T 01-11-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily CDA09_16905 0836966c4b713fee8530f67a9538039f 342 Gene3D G3DSA:3.30.565.10 202 333 1.9E-9 T 01-11-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily CDA09_00895 22e869dfb1098f8989af58e4d7a0fbdc 313 Pfam PF09828 Chromate resistance exported protein 180 309 1.0E-43 T 01-11-2018 IPR018634 Chromate resistance exported protein CDA09_10055 9db7fd49a576c0d8346bc773baa45eca 231 Pfam PF13577 SnoaL-like domain 41 165 1.3E-20 T 01-11-2018 IPR037401 SnoaL-like domain CDA09_10055 9db7fd49a576c0d8346bc773baa45eca 231 Gene3D G3DSA:3.10.450.50 26 190 9.7E-39 T 01-11-2018 CDA09_10055 9db7fd49a576c0d8346bc773baa45eca 231 SUPERFAMILY SSF54427 39 175 8.04E-30 T 01-11-2018 IPR032710 NTF2-like domain superfamily CDA09_11975 76e0babb54983b111e76e9ca70e3ecf5 196 Pfam PF00355 Rieske [2Fe-2S] domain 108 165 7.9E-7 T 01-11-2018 IPR017941 Rieske [2Fe-2S] iron-sulphur domain GO:0016491|GO:0051537|GO:0055114 CDA09_11975 76e0babb54983b111e76e9ca70e3ecf5 196 TIGRFAM TIGR02694 arsenite_ox_S: arsenite oxidase, small subunit 63 187 3.7E-35 T 01-11-2018 IPR014067 Arsenite oxidase, small subunit MetaCyc: PWY-7429 CDA09_11975 76e0babb54983b111e76e9ca70e3ecf5 196 Gene3D G3DSA:2.102.10.10 60 191 4.8E-33 T 01-11-2018 IPR036922 Rieske [2Fe-2S] iron-sulphur domain superfamily GO:0016491|GO:0051537|GO:0055114 CDA09_11975 76e0babb54983b111e76e9ca70e3ecf5 196 SUPERFAMILY SSF50022 66 178 1.28E-19 T 01-11-2018 IPR036922 Rieske [2Fe-2S] iron-sulphur domain superfamily GO:0016491|GO:0051537|GO:0055114 CDA09_04870 2e8526fd3a62ef56d30e9f2a4cb241b0 135 Pfam PF01850 PIN domain 4 125 1.2E-8 T 01-11-2018 IPR002716 PIN domain CDA09_04870 2e8526fd3a62ef56d30e9f2a4cb241b0 135 Gene3D G3DSA:3.40.50.1010 1 128 1.1E-26 T 01-11-2018 CDA09_04870 2e8526fd3a62ef56d30e9f2a4cb241b0 135 SUPERFAMILY SSF88723 3 130 7.57E-16 T 01-11-2018 IPR029060 PIN-like domain superfamily CDA09_16230 330965b5a7b7d0834284688d74542504 124 Pfam PF00507 NADH-ubiquinone/plastoquinone oxidoreductase, chain 3 21 123 8.5E-35 T 01-11-2018 IPR000440 NADH:ubiquinone/plastoquinone oxidoreductase, chain 3 GO:0008137|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 CDA09_16230 330965b5a7b7d0834284688d74542504 124 Gene3D G3DSA:1.20.58.1610 1 124 4.1E-40 T 01-11-2018 IPR038430 NADH:ubiquinone oxidoreductase, subunit 3 superfamily Reactome: R-HSA-611105|Reactome: R-HSA-6799198 CDA09_16230 330965b5a7b7d0834284688d74542504 124 Hamap MF_01394 NAD(P)H-quinone oxidoreductase subunit 3, chloroplastic [ndhC]. 1 124 19.026 T 01-11-2018 IPR023043 NAD(P)H-quinone oxidoreductase subunit 3, bacterial/plastid GO:0016651|GO:0055114 CDA09_19725 8f55a4319ea452d3cea58e6c987dcc27 354 Pfam PF02653 Branched-chain amino acid transport system / permease component 52 329 8.4E-31 T 01-11-2018 IPR001851 ABC transporter, permease GO:0016020|GO:0022857|GO:0055085 CDA09_19110 636f40e86a06dd9f1b33637e1d652707 94 SUPERFAMILY SSF81301 3 92 1.81E-19 T 01-11-2018 CDA09_19110 636f40e86a06dd9f1b33637e1d652707 94 Gene3D G3DSA:3.30.460.10 2 92 2.6E-23 T 01-11-2018 CDA09_19110 636f40e86a06dd9f1b33637e1d652707 94 Pfam PF01909 Nucleotidyltransferase domain 9 90 1.1E-8 T 01-11-2018 IPR002934 Polymerase, nucleotidyl transferase domain GO:0016779 CDA09_11965 c12ee7aab0a5614b231655a94cf0e2f6 319 Gene3D G3DSA:3.20.20.450 56 313 2.3E-94 T 01-11-2018 IPR035919 EAL domain superfamily CDA09_11965 c12ee7aab0a5614b231655a94cf0e2f6 319 Pfam PF00563 EAL domain 60 295 7.1E-67 T 01-11-2018 IPR001633 EAL domain CDA09_11965 c12ee7aab0a5614b231655a94cf0e2f6 319 SMART SM00052 54 300 1.1E-104 T 01-11-2018 IPR001633 EAL domain CDA09_11965 c12ee7aab0a5614b231655a94cf0e2f6 319 SUPERFAMILY SSF141868 60 306 2.88E-85 T 01-11-2018 IPR035919 EAL domain superfamily CDA09_14615 4fe135235e84fc20b909f5179548b2e4 85 TIGRFAM TIGR02725 phenyl_P_gamma: phenylphosphate carboxylase, gamma subunit 3 84 1.2E-41 T 01-11-2018 IPR014097 Phenylphosphate carboxylase, gamma subunit CDA09_14615 4fe135235e84fc20b909f5179548b2e4 85 Pfam PF09662 Phenylphosphate carboxylase gamma subunit (Phenyl_P_gamma) 3 84 1.5E-50 T 01-11-2018 IPR014097 Phenylphosphate carboxylase, gamma subunit CDA09_14120 3fb40d91a029d0f121cdec4fc4400b85 196 Gene3D G3DSA:3.40.140.10 72 196 3.0E-37 T 01-11-2018 CDA09_14120 3fb40d91a029d0f121cdec4fc4400b85 196 Pfam PF04002 RadC-like JAB domain 76 194 9.1E-38 T 01-11-2018 IPR025657 RadC-like JAB domain CDA09_03575 cf269af63c779691ef868b726517f936 242 Gene3D G3DSA:3.60.20.10 2 232 6.8E-26 T 01-11-2018 IPR029055 Nucleophile aminohydrolases, N-terminal CDA09_03575 cf269af63c779691ef868b726517f936 242 SUPERFAMILY SSF56235 2 239 5.74E-35 T 01-11-2018 IPR029055 Nucleophile aminohydrolases, N-terminal CDA09_03575 cf269af63c779691ef868b726517f936 242 PIRSF PIRSF009120 1 242 1.4E-111 T 01-11-2018 IPR016545 Uncharacterised conserved protein UCP009120, proteasome-type protease, Sll0069 CDA09_15525 143e201102ffa4411d7399c6a9124f99 394 ProSitePatterns PS00216 Sugar transport proteins signature 1. 65 82 - T 01-11-2018 IPR005829 Sugar transporter, conserved site GO:0005215|GO:0016021|GO:0055085 CDA09_15525 143e201102ffa4411d7399c6a9124f99 394 Pfam PF07690 Major Facilitator Superfamily 17 340 1.5E-44 T 01-11-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 CDA09_15525 143e201102ffa4411d7399c6a9124f99 394 SUPERFAMILY SSF103473 7 387 1.22E-58 T 01-11-2018 IPR036259 MFS transporter superfamily CDA09_15525 143e201102ffa4411d7399c6a9124f99 394 Gene3D G3DSA:1.20.1250.20 4 379 6.7E-51 T 01-11-2018 CDA09_12440 bd6e4318660bdea67e817fa069a8ecfe 376 Pfam PF04230 Polysaccharide pyruvyl transferase 74 339 1.1E-15 T 01-11-2018 IPR007345 Polysaccharide pyruvyl transferase CDA09_17695 fbb728c0c25a98eec8bc3dcb7af25c8c 208 Pfam PF04367 Protein of unknown function (DUF502) 56 161 7.5E-36 T 01-11-2018 IPR007462 Protein of unknown function DUF502 CDA09_18405 b8c6e1ff093949390cfc57dd0ad8b220 112 SUPERFAMILY SSF103481 34 109 3.79E-10 T 01-11-2018 CDA09_18405 b8c6e1ff093949390cfc57dd0ad8b220 112 Pfam PF00892 EamA-like transporter family 14 110 2.3E-6 T 01-11-2018 IPR000620 EamA domain GO:0016020|GO:0016021 CDA09_08765 7ebbabc09d8b9dd0d6cdf5726b3dffcb 316 SUPERFAMILY SSF52833 31 153 6.89E-16 T 01-11-2018 IPR036249 Thioredoxin-like superfamily CDA09_08765 7ebbabc09d8b9dd0d6cdf5726b3dffcb 316 Pfam PF13410 Glutathione S-transferase, C-terminal domain 197 267 6.3E-12 T 01-11-2018 CDA09_08765 7ebbabc09d8b9dd0d6cdf5726b3dffcb 316 Pfam PF13409 Glutathione S-transferase, N-terminal domain 56 151 5.1E-20 T 01-11-2018 IPR004045 Glutathione S-transferase, N-terminal GO:0005515 CDA09_08765 7ebbabc09d8b9dd0d6cdf5726b3dffcb 316 SUPERFAMILY SSF47616 170 312 7.66E-27 T 01-11-2018 IPR036282 Glutathione S-transferase, C-terminal domain superfamily CDA09_08765 7ebbabc09d8b9dd0d6cdf5726b3dffcb 316 Gene3D G3DSA:3.40.30.130 1 176 1.6E-61 T 01-11-2018 CDA09_08765 7ebbabc09d8b9dd0d6cdf5726b3dffcb 316 Gene3D G3DSA:1.20.1050.10 177 313 2.7E-52 T 01-11-2018 CDA09_08765 7ebbabc09d8b9dd0d6cdf5726b3dffcb 316 PIRSF PIRSF015753 4 314 2.0E-111 T 01-11-2018 IPR016639 Glutathione S-transferase Omega/GSH GO:0004364 CDA09_08010 98e3aad6961bc86cb1b60fea43db89e5 158 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 86 97 - T 01-11-2018 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site CDA09_08010 98e3aad6961bc86cb1b60fea43db89e5 158 Pfam PF00037 4Fe-4S binding domain 6 22 3.5E-5 T 01-11-2018 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain CDA09_08010 98e3aad6961bc86cb1b60fea43db89e5 158 Gene3D G3DSA:3.30.70.20 59 112 6.7E-25 T 01-11-2018 CDA09_08010 98e3aad6961bc86cb1b60fea43db89e5 158 Pfam PF13247 4Fe-4S dicluster domain 49 133 4.9E-14 T 01-11-2018 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain CDA09_08010 98e3aad6961bc86cb1b60fea43db89e5 158 SUPERFAMILY SSF54862 4 137 2.26E-40 T 01-11-2018 CDA09_08010 98e3aad6961bc86cb1b60fea43db89e5 158 Gene3D G3DSA:3.30.70.20 5 139 6.7E-25 T 01-11-2018 CDA09_17820 ed6d6ceb4b9a94747c2374c8f9c2d8b2 162 TIGRFAM TIGR02199 rfaE_dom_II: bifunctional protein RfaE, domain II 19 160 5.7E-56 T 01-11-2018 IPR011914 RfaE bifunctional protein, domain II GO:0005975|GO:0016773|GO:0016779 KEGG: 00540+2.7.7.70+2.7.1.167 CDA09_17820 ed6d6ceb4b9a94747c2374c8f9c2d8b2 162 Pfam PF01467 Cytidylyltransferase-like 32 124 1.2E-12 T 01-11-2018 IPR004821 Cytidyltransferase-like domain GO:0003824|GO:0009058 CDA09_17820 ed6d6ceb4b9a94747c2374c8f9c2d8b2 162 SUPERFAMILY SSF52374 28 158 2.82E-21 T 01-11-2018 CDA09_17820 ed6d6ceb4b9a94747c2374c8f9c2d8b2 162 TIGRFAM TIGR00125 cyt_tran_rel: cytidyltransferase-like domain 30 95 3.4E-12 T 01-11-2018 IPR004821 Cytidyltransferase-like domain GO:0003824|GO:0009058 CDA09_17820 ed6d6ceb4b9a94747c2374c8f9c2d8b2 162 Gene3D G3DSA:3.40.50.620 16 161 6.3E-29 T 01-11-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold CDA09_12005 b7d4637ba56b02146315dfc46c7929fd 280 SUPERFAMILY SSF103481 41 138 3.27E-6 T 01-11-2018 CDA09_12005 b7d4637ba56b02146315dfc46c7929fd 280 SUPERFAMILY SSF103481 183 278 1.44E-11 T 01-11-2018 CDA09_12005 b7d4637ba56b02146315dfc46c7929fd 280 Pfam PF00892 EamA-like transporter family 145 274 1.6E-11 T 01-11-2018 IPR000620 EamA domain GO:0016020|GO:0016021 CDA09_22185 ade3d13911edabea332dc93faf714540 186 Pfam PF11198 Protein of unknown function (DUF2857) 8 182 2.4E-61 T 01-11-2018 IPR021364 Protein of unknown function DUF2857 CDA09_19275 cddbe74597cc9400533df4a08e845c0e 74 Pfam PF11127 Protein of unknown function (DUF2892) 4 63 6.4E-15 T 01-11-2018 IPR021309 Protein of unknown function DUF2892 CDA09_01845 4469aa9bf1c8357032f67e056546d115 156 Pfam PF08448 PAS fold 25 129 1.5E-5 T 01-11-2018 IPR013656 PAS fold-4 CDA09_01845 4469aa9bf1c8357032f67e056546d115 156 Gene3D G3DSA:3.30.450.20 12 139 1.4E-5 T 01-11-2018 CDA09_01845 4469aa9bf1c8357032f67e056546d115 156 SUPERFAMILY SSF55785 25 129 4.71E-7 T 01-11-2018 IPR035965 PAS domain superfamily CDA09_12850 c96708cf8bea44bfc01808b3cf2ba27e 423 Pfam PF13194 Domain of unknown function (DUF4010) 182 390 1.0E-60 T 01-11-2018 IPR025105 Domain of unknown function DUF4010 CDA09_12850 c96708cf8bea44bfc01808b3cf2ba27e 423 Pfam PF02308 MgtC family 16 133 3.3E-21 T 01-11-2018 IPR003416 MgtC/SapB/SrpB/YhiD family GO:0016020 CDA09_16260 ae1ef006293ebe9843dbe99a423e1daa 330 Gene3D G3DSA:3.40.190.10 27 287 1.1E-90 T 01-11-2018 CDA09_16260 ae1ef006293ebe9843dbe99a423e1daa 330 Pfam PF12849 PBP superfamily domain 19 275 2.3E-34 T 01-11-2018 IPR024370 PBP domain CDA09_16260 ae1ef006293ebe9843dbe99a423e1daa 330 Gene3D G3DSA:3.40.190.10 107 251 1.1E-90 T 01-11-2018 CDA09_16260 ae1ef006293ebe9843dbe99a423e1daa 330 TIGRFAM TIGR02136 ptsS_2: phosphate binding protein 20 289 1.5E-93 T 01-11-2018 IPR011862 Phosphate binding protein GO:0042301 CDA09_16260 ae1ef006293ebe9843dbe99a423e1daa 330 SUPERFAMILY SSF53850 26 302 9.5E-77 T 01-11-2018 CDA09_14795 8f5bfb8d0d6574882da70510d85f8542 172 TIGRFAM TIGR01994 SUF_scaf_2: SUF system FeS assembly protein, NifU family 5 140 8.0E-45 T 01-11-2018 CDA09_14795 8f5bfb8d0d6574882da70510d85f8542 172 Gene3D G3DSA:3.90.1010.10 2 145 7.3E-51 T 01-11-2018 CDA09_14795 8f5bfb8d0d6574882da70510d85f8542 172 Pfam PF01592 NifU-like N terminal domain 8 127 3.3E-20 T 01-11-2018 IPR002871 NIF system FeS cluster assembly, NifU, N-terminal GO:0005506|GO:0016226|GO:0051536 Reactome: R-HSA-1362409 CDA09_14795 8f5bfb8d0d6574882da70510d85f8542 172 SUPERFAMILY SSF82649 3 142 9.68E-48 T 01-11-2018 CDA09_05520 6e95e058e39998a04b70e678f46325c2 195 Pfam PF12007 Protein of unknown function (DUF3501) 4 193 1.2E-70 T 01-11-2018 IPR021890 Protein of unknown function DUF3501 CDA09_04780 f62c35d78b2d1041d1d25cea3933ea11 333 SUPERFAMILY SSF51735 118 283 9.06E-46 T 01-11-2018 IPR036291 NAD(P)-binding domain superfamily CDA09_04780 f62c35d78b2d1041d1d25cea3933ea11 333 ProSitePatterns PS01162 Quinone oxidoreductase / zeta-crystallin signature. 150 171 - T 01-11-2018 IPR002364 Quinone oxidoreductase/zeta-crystallin, conserved site GO:0008270|GO:0016491 CDA09_04780 f62c35d78b2d1041d1d25cea3933ea11 333 Pfam PF08240 Alcohol dehydrogenase GroES-like domain 35 110 9.3E-10 T 01-11-2018 IPR013154 Alcohol dehydrogenase, N-terminal GO:0055114 CDA09_04780 f62c35d78b2d1041d1d25cea3933ea11 333 SUPERFAMILY SSF50129 6 155 1.73E-36 T 01-11-2018 IPR011032 GroES-like superfamily CDA09_04780 f62c35d78b2d1041d1d25cea3933ea11 333 Gene3D G3DSA:3.90.180.10 20 327 1.6E-111 T 01-11-2018 CDA09_04780 f62c35d78b2d1041d1d25cea3933ea11 333 SMART SM00829 18 331 1.2E-35 T 01-11-2018 IPR020843 Polyketide synthase, enoylreductase domain GO:0016491 CDA09_04780 f62c35d78b2d1041d1d25cea3933ea11 333 Gene3D G3DSA:3.40.50.720 130 277 1.6E-111 T 01-11-2018 CDA09_04780 f62c35d78b2d1041d1d25cea3933ea11 333 Pfam PF00107 Zinc-binding dehydrogenase 161 287 5.0E-30 T 01-11-2018 IPR013149 Alcohol dehydrogenase, C-terminal GO:0055114 CDA09_14455 97b48ea08e39f25bb7b4cdc544535b1e 238 ProSitePatterns PS00211 ABC transporters family signature. 153 167 - T 01-11-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 CDA09_14455 97b48ea08e39f25bb7b4cdc544535b1e 238 Gene3D G3DSA:3.40.50.300 11 238 1.6E-70 T 01-11-2018 CDA09_14455 97b48ea08e39f25bb7b4cdc544535b1e 238 SMART SM00382 43 229 3.7E-14 T 01-11-2018 IPR003593 AAA+ ATPase domain CDA09_14455 97b48ea08e39f25bb7b4cdc544535b1e 238 Pfam PF00005 ABC transporter 34 180 2.2E-32 T 01-11-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 CDA09_14455 97b48ea08e39f25bb7b4cdc544535b1e 238 SUPERFAMILY SSF52540 17 234 2.49E-66 T 01-11-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CDA09_19720 ddd788023b7c1cf56411819187a2ec9b 441 Gene3D G3DSA:3.40.50.2300 41 361 1.2E-79 T 01-11-2018 CDA09_19720 ddd788023b7c1cf56411819187a2ec9b 441 Pfam PF13458 Periplasmic binding protein 32 398 2.6E-82 T 01-11-2018 IPR028081 Leucine-binding protein domain CDA09_19720 ddd788023b7c1cf56411819187a2ec9b 441 Gene3D G3DSA:3.40.50.2300 149 290 1.2E-79 T 01-11-2018 CDA09_19720 ddd788023b7c1cf56411819187a2ec9b 441 SUPERFAMILY SSF53822 36 402 5.05E-50 T 01-11-2018 IPR028082 Periplasmic binding protein-like I CDA09_22405 ed20624e023ab04a63ccceee917f93bf 121 SUPERFAMILY SSF46689 48 115 1.43E-11 T 01-11-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 CDA09_22405 ed20624e023ab04a63ccceee917f93bf 121 Gene3D G3DSA:1.10.10.60 80 121 3.4E-9 T 01-11-2018 CDA09_22405 ed20624e023ab04a63ccceee917f93bf 121 Pfam PF08765 Mor transcription activator family 28 117 5.7E-14 T 01-11-2018 IPR014875 Mor transcription activator CDA09_20345 35d55526766f65fa6b899d43eddd3dd2 190 Pfam PF05137 Fimbrial assembly protein (PilN) 101 176 8.6E-21 T 01-11-2018 IPR007813 Fimbrial assembly PilN CDA09_03205 a380103e829c0709d13507b453bdbc36 322 Hamap MF_00206 Lipoyl synthase [lipA]. 1 322 152.094 T 01-11-2018 IPR003698 Lipoyl synthase GO:0009107|GO:0016992|GO:0051539 KEGG: 00785+2.8.1.8|MetaCyc: PWY-6987|MetaCyc: PWY-7382|Reactome: R-HSA-389661 CDA09_03205 a380103e829c0709d13507b453bdbc36 322 Pfam PF16881 N-terminal domain of lipoyl synthase of Radical_SAM family 34 74 3.2E-6 T 01-11-2018 IPR031691 Lipoyl synthase, N-terminal KEGG: 00785+2.8.1.8|MetaCyc: PWY-6987|MetaCyc: PWY-7382|Reactome: R-HSA-389661 CDA09_03205 a380103e829c0709d13507b453bdbc36 322 SMART SM00729 85 293 9.9E-16 T 01-11-2018 IPR006638 Elp3/MiaB/NifB GO:0003824|GO:0051536 CDA09_03205 a380103e829c0709d13507b453bdbc36 322 Gene3D G3DSA:3.20.20.70 82 290 1.5E-20 T 01-11-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 CDA09_03205 a380103e829c0709d13507b453bdbc36 322 Pfam PF04055 Radical SAM superfamily 91 252 3.2E-18 T 01-11-2018 IPR007197 Radical SAM GO:0003824|GO:0051536 CDA09_03205 a380103e829c0709d13507b453bdbc36 322 SUPERFAMILY SSF102114 53 316 3.4E-68 T 01-11-2018 CDA09_03205 a380103e829c0709d13507b453bdbc36 322 TIGRFAM TIGR00510 lipA: lipoyl synthase 32 318 2.3E-130 T 01-11-2018 IPR003698 Lipoyl synthase GO:0009107|GO:0016992|GO:0051539 KEGG: 00785+2.8.1.8|MetaCyc: PWY-6987|MetaCyc: PWY-7382|Reactome: R-HSA-389661 CDA09_03205 a380103e829c0709d13507b453bdbc36 322 PIRSF PIRSF005963 1 319 8.8E-133 T 01-11-2018 IPR003698 Lipoyl synthase GO:0009107|GO:0016992|GO:0051539 KEGG: 00785+2.8.1.8|MetaCyc: PWY-6987|MetaCyc: PWY-7382|Reactome: R-HSA-389661 CDA09_21225 0a9a7f7adf54c2cd3a8e282f89f63eac 87 Pfam PF04380 Membrane fusogenic activity 1 74 9.0E-27 T 01-11-2018 IPR007475 Membrane fusogenic activity CDA09_18170 2929212684f4ff3934805b3ed76721a2 282 Pfam PF08478 POTRA domain, FtsQ-type 70 139 1.2E-17 T 01-11-2018 IPR013685 POTRA domain, FtsQ-type CDA09_18170 2929212684f4ff3934805b3ed76721a2 282 Pfam PF03799 Cell division protein FtsQ 143 262 1.1E-20 T 01-11-2018 IPR005548 Cell division protein FtsQ/DivIB CDA09_18170 2929212684f4ff3934805b3ed76721a2 282 Gene3D G3DSA:3.10.20.310 69 139 1.1E-18 T 01-11-2018 CDA09_18170 2929212684f4ff3934805b3ed76721a2 282 Gene3D G3DSA:3.40.50.11690 141 272 1.5E-29 T 01-11-2018 CDA09_18170 2929212684f4ff3934805b3ed76721a2 282 Hamap MF_00911 Cell division protein FtsQ [ftsQ]. 40 270 20.721 T 01-11-2018 IPR026579 Cell division protein FtsQ GO:0090529 CDA09_04385 2f6c1dc92f6b00e8ffa76bd55c62c3d8 168 Gene3D G3DSA:3.40.30.10 4 165 1.3E-32 T 01-11-2018 CDA09_04385 2f6c1dc92f6b00e8ffa76bd55c62c3d8 168 ProSitePatterns PS00194 Thioredoxin family active site. 56 74 - T 01-11-2018 IPR017937 Thioredoxin, conserved site GO:0045454 CDA09_04385 2f6c1dc92f6b00e8ffa76bd55c62c3d8 168 Pfam PF08534 Redoxin 47 155 2.7E-19 T 01-11-2018 IPR013740 Redoxin GO:0016491 Reactome: R-HSA-3299685|Reactome: R-HSA-5628897 CDA09_04385 2f6c1dc92f6b00e8ffa76bd55c62c3d8 168 SUPERFAMILY SSF52833 5 162 1.84E-31 T 01-11-2018 IPR036249 Thioredoxin-like superfamily CDA09_00575 538fa1f4c38263ee8cb69a0e91817704 299 Gene3D G3DSA:2.40.10.340 128 272 2.1E-32 T 01-11-2018 CDA09_00575 538fa1f4c38263ee8cb69a0e91817704 299 TIGRFAM TIGR00219 mreC: rod shape-determining protein MreC 12 276 1.3E-51 T 01-11-2018 IPR007221 Rod shape-determining protein MreC GO:0008360 CDA09_00575 538fa1f4c38263ee8cb69a0e91817704 299 Gene3D G3DSA:2.40.10.350 187 262 2.1E-32 T 01-11-2018 CDA09_00575 538fa1f4c38263ee8cb69a0e91817704 299 PIRSF PIRSF038471 9 289 9.4E-71 T 01-11-2018 IPR007221 Rod shape-determining protein MreC GO:0008360 CDA09_00575 538fa1f4c38263ee8cb69a0e91817704 299 Pfam PF04085 rod shape-determining protein MreC 131 274 1.2E-36 T 01-11-2018 IPR007221 Rod shape-determining protein MreC GO:0008360 CDA09_17385 9308fa7245d35e1a0d1b409b4e459fcc 308 SUPERFAMILY SSF52768 2 307 4.8E-104 T 01-11-2018 IPR023696 Ureohydrolase domain superfamily CDA09_17385 9308fa7245d35e1a0d1b409b4e459fcc 308 PRINTS PR01270 Histone deacetylase superfamily signature 123 146 1.5E-17 T 01-11-2018 IPR000286 Histone deacetylase family Reactome: R-HSA-2122947|Reactome: R-HSA-2644606|Reactome: R-HSA-2894862 CDA09_17385 9308fa7245d35e1a0d1b409b4e459fcc 308 PRINTS PR01270 Histone deacetylase superfamily signature 157 172 1.5E-17 T 01-11-2018 IPR000286 Histone deacetylase family Reactome: R-HSA-2122947|Reactome: R-HSA-2644606|Reactome: R-HSA-2894862 CDA09_17385 9308fa7245d35e1a0d1b409b4e459fcc 308 PRINTS PR01270 Histone deacetylase superfamily signature 235 245 1.5E-17 T 01-11-2018 IPR000286 Histone deacetylase family Reactome: R-HSA-2122947|Reactome: R-HSA-2644606|Reactome: R-HSA-2894862 CDA09_17385 9308fa7245d35e1a0d1b409b4e459fcc 308 Pfam PF00850 Histone deacetylase domain 21 305 5.0E-82 T 01-11-2018 IPR023801 Histone deacetylase domain Reactome: R-HSA-2122947|Reactome: R-HSA-2644606|Reactome: R-HSA-2894862 CDA09_17385 9308fa7245d35e1a0d1b409b4e459fcc 308 Gene3D G3DSA:3.40.800.20 1 308 4.9E-120 T 01-11-2018 IPR037138 Histone deacetylase domain superfamily Reactome: R-HSA-2122947|Reactome: R-HSA-2644606|Reactome: R-HSA-2894862 CDA09_11120 c1c2739f10e87594ba37265974690469 104 Pfam PF13769 Virulence factor 8 92 4.1E-28 T 01-11-2018 IPR025989 Virulence factor domain CDA09_19130 b1ac3a832c2af5eb84362ff91f853648 128 SUPERFAMILY SSF88723 4 121 7.57E-17 T 01-11-2018 IPR029060 PIN-like domain superfamily CDA09_19130 b1ac3a832c2af5eb84362ff91f853648 128 Pfam PF01850 PIN domain 4 115 3.1E-8 T 01-11-2018 IPR002716 PIN domain CDA09_19130 b1ac3a832c2af5eb84362ff91f853648 128 Gene3D G3DSA:3.40.50.1010 1 119 7.2E-9 T 01-11-2018 CDA09_14330 e2d8324785cfb6ee305c75a0572401c2 210 Gene3D G3DSA:3.90.870.10 1 206 7.4E-59 T 01-11-2018 CDA09_14330 e2d8324785cfb6ee305c75a0572401c2 210 TIGRFAM TIGR00057 TIGR00057: tRNA threonylcarbamoyl adenosine modification protein, Sua5/YciO/YrdC/YwlC family 8 200 2.3E-57 T 01-11-2018 IPR006070 YrdC-like domain GO:0003725 CDA09_14330 e2d8324785cfb6ee305c75a0572401c2 210 Pfam PF01300 Telomere recombination 22 198 1.5E-41 T 01-11-2018 IPR006070 YrdC-like domain GO:0003725 CDA09_14330 e2d8324785cfb6ee305c75a0572401c2 210 SUPERFAMILY SSF55821 1 203 4.27E-59 T 01-11-2018 IPR017945 DHBP synthase RibB-like alpha/beta domain superfamily CDA09_18615 aa18320551392602530f362e3ec7b6da 138 SUPERFAMILY SSF46626 15 135 2.44E-19 T 01-11-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 CDA09_18615 aa18320551392602530f362e3ec7b6da 138 Pfam PF13442 Cytochrome C oxidase, cbb3-type, subunit III 59 132 2.4E-15 T 01-11-2018 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 Reactome: R-HSA-111457|Reactome: R-HSA-111458|Reactome: R-HSA-111459|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 CDA09_18615 aa18320551392602530f362e3ec7b6da 138 Gene3D G3DSA:1.10.760.10 46 138 6.9E-17 T 01-11-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 CDA09_08165 f6d7ed0574b4e7706bf102501c115af4 359 Pfam PF03739 Predicted permease YjgP/YjgQ family 7 353 2.1E-80 T 01-11-2018 IPR005495 Permease LptG/LptF-related GO:0016021 CDA09_08165 f6d7ed0574b4e7706bf102501c115af4 359 TIGRFAM TIGR04408 LptG_lptG: LPS export ABC transporter permease LptG 5 355 4.4E-125 T 01-11-2018 IPR030923 LPS export ABC transporter permease LptG GO:0043190|GO:0055085 CDA09_19415 c8d738c4f8fda3fc6654dbc9a25eb1f9 37 SUPERFAMILY SSF57840 1 37 6.54E-16 T 01-11-2018 IPR035977 Ribosomal protein L36 superfamily GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 CDA09_19415 c8d738c4f8fda3fc6654dbc9a25eb1f9 37 Hamap MF_00251 50S ribosomal protein L36 [rpmJ]. 1 37 17.214 T 01-11-2018 IPR000473 Ribosomal protein L36 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 CDA09_19415 c8d738c4f8fda3fc6654dbc9a25eb1f9 37 TIGRFAM TIGR01022 rpmJ_bact: ribosomal protein bL36 1 37 8.9E-21 T 01-11-2018 IPR000473 Ribosomal protein L36 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 CDA09_19415 c8d738c4f8fda3fc6654dbc9a25eb1f9 37 ProSitePatterns PS00828 Ribosomal protein L36 signature. 11 36 - T 01-11-2018 IPR000473 Ribosomal protein L36 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 CDA09_19415 c8d738c4f8fda3fc6654dbc9a25eb1f9 37 Pfam PF00444 Ribosomal protein L36 1 37 5.9E-18 T 01-11-2018 IPR000473 Ribosomal protein L36 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 CDA09_16810 2a7d2687506cb63736e6c22939d18347 176 Gene3D G3DSA:1.20.120.520 3 176 1.1E-43 T 01-11-2018 CDA09_16810 2a7d2687506cb63736e6c22939d18347 176 Pfam PF01814 Hemerythrin HHE cation binding domain 15 153 1.6E-16 T 01-11-2018 IPR012312 Haemerythrin-like Reactome: R-HSA-390471|Reactome: R-HSA-8951664|Reactome: R-HSA-917937|Reactome: R-HSA-983168 CDA09_13010 78d6651c024bb7dd444f109f8758073d 228 Pfam PF11445 Protein of unknown function (DUF2894) 24 202 6.3E-64 T 01-11-2018 IPR021549 Protein of unknown function DUF2894 CDA09_22965 a84d37ae1c0183dbdedb5597e69e6923 230 SUPERFAMILY SSF52540 2 217 2.66E-60 T 01-11-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CDA09_22965 a84d37ae1c0183dbdedb5597e69e6923 230 Gene3D G3DSA:3.40.50.300 1 224 2.4E-59 T 01-11-2018 CDA09_22965 a84d37ae1c0183dbdedb5597e69e6923 230 TIGRFAM TIGR03410 urea_trans_UrtE: urea ABC transporter, ATP-binding protein UrtE 2 230 6.8E-105 T 01-11-2018 IPR017780 ABC transporter, urea, ATP-binding protein, UrtE CDA09_22965 a84d37ae1c0183dbdedb5597e69e6923 230 SMART SM00382 26 209 4.8E-10 T 01-11-2018 IPR003593 AAA+ ATPase domain CDA09_22965 a84d37ae1c0183dbdedb5597e69e6923 230 Pfam PF00005 ABC transporter 17 159 3.1E-30 T 01-11-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 CDA09_15120 9248e4496e258af45ca74e9de7e34ae9 125 Pfam PF04956 TrbC/VIRB2 family 28 115 2.1E-24 T 01-11-2018 IPR007039 Conjugal transfer TrbC/type IV secretion VirB2 CDA09_04465 2c0cd7bfe914799443802bc385f769cc 61 Pfam PF09838 Uncharacterized protein conserved in bacteria (DUF2065) 5 59 2.3E-22 T 01-11-2018 IPR019201 Protein of unknown function DUF2065 CDA09_13505 64fe71dc51827f00bc9aafb0d722fed9 136 Pfam PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily 5 117 7.3E-7 T 01-11-2018 IPR004360 Glyoxalase/fosfomycin resistance/dioxygenase domain CDA09_13505 64fe71dc51827f00bc9aafb0d722fed9 136 SUPERFAMILY SSF54593 1 132 5.09E-25 T 01-11-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase CDA09_13505 64fe71dc51827f00bc9aafb0d722fed9 136 Gene3D G3DSA:3.10.180.10 1 134 8.4E-20 T 01-11-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase CDA09_19900 2f2cbd2c33eb88a3c92c38550e10deac 158 Pfam PF05433 Glycine zipper 2TM domain 114 153 2.2E-8 T 01-11-2018 IPR008816 Glycine zipper 2TM domain GO:0019867 CDA09_14890 83b1bf9568dac57735a0137a41bae054 290 TIGRFAM TIGR01099 galU: UTP--glucose-1-phosphate uridylyltransferase 4 267 1.3E-113 T 01-11-2018 IPR005771 UTP--glucose-1-phosphate uridylyltransferase, bacterial/archaeal-type GO:0003983|GO:0006011 KEGG: 00040+2.7.7.9|KEGG: 00052+2.7.7.9|KEGG: 00500+2.7.7.9|KEGG: 00520+2.7.7.9|MetaCyc: PWY-3801|MetaCyc: PWY-6527|MetaCyc: PWY-7238|MetaCyc: PWY-7343|MetaCyc: PWY-7817 CDA09_14890 83b1bf9568dac57735a0137a41bae054 290 Gene3D G3DSA:3.90.550.10 1 290 9.6E-89 T 01-11-2018 IPR029044 Nucleotide-diphospho-sugar transferases CDA09_14890 83b1bf9568dac57735a0137a41bae054 290 Pfam PF00483 Nucleotidyl transferase 11 267 2.0E-30 T 01-11-2018 IPR005835 Nucleotidyl transferase domain GO:0009058|GO:0016779 CDA09_14890 83b1bf9568dac57735a0137a41bae054 290 SUPERFAMILY SSF53448 4 279 7.72E-66 T 01-11-2018 IPR029044 Nucleotide-diphospho-sugar transferases CDA09_10390 c4a8ab71cd823e84bec20f2939e141e3 340 Pfam PF01548 Transposase 6 146 1.1E-11 T 01-11-2018 IPR002525 Transposase, IS111A/IS1328/IS1533, N-terminal GO:0003677|GO:0004803|GO:0006313 CDA09_10390 c4a8ab71cd823e84bec20f2939e141e3 340 Pfam PF02371 Transposase IS116/IS110/IS902 family 212 286 2.2E-25 T 01-11-2018 IPR003346 Transposase, IS116/IS110/IS902 GO:0003677|GO:0004803|GO:0006313 CDA09_13605 2ed6cc94926f3aa75209040609bbfb1b 301 Gene3D G3DSA:1.10.1040.10 192 296 3.9E-33 T 01-11-2018 IPR013328 6-phosphogluconate dehydrogenase, domain 2 GO:0016491|GO:0055114 CDA09_13605 2ed6cc94926f3aa75209040609bbfb1b 301 Gene3D G3DSA:3.40.50.720 1 191 7.2E-54 T 01-11-2018 CDA09_13605 2ed6cc94926f3aa75209040609bbfb1b 301 SUPERFAMILY SSF48179 188 291 4.0E-32 T 01-11-2018 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily GO:0055114 CDA09_13605 2ed6cc94926f3aa75209040609bbfb1b 301 SUPERFAMILY SSF51735 5 188 3.72E-50 T 01-11-2018 IPR036291 NAD(P)-binding domain superfamily CDA09_13605 2ed6cc94926f3aa75209040609bbfb1b 301 Pfam PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain 191 284 4.3E-28 T 01-11-2018 IPR006108 3-hydroxyacyl-CoA dehydrogenase, C-terminal GO:0003857|GO:0006631|GO:0016491|GO:0055114 KEGG: 00062+4.2.1.17+1.1.1.35|KEGG: 00071+4.2.1.17+1.1.1.35|KEGG: 00120+1.1.1.35|KEGG: 00280+4.2.1.17+1.1.1.35|KEGG: 00281+4.2.1.17+1.1.1.35|KEGG: 00310+4.2.1.17+1.1.1.35|KEGG: 00360+4.2.1.17|KEGG: 00362+4.2.1.17+1.1.1.35|KEGG: 00380+4.2.1.17+1.1.1.35|KEGG: 00410+4.2.1.17|KEGG: 00592+4.2.1.17|KEGG: 00623+1.1.1.35|KEGG: 00627+4.2.1.17|KEGG: 00640+4.2.1.17|KEGG: 00650+4.2.1.17+1.1.1.35|KEGG: 00720+4.2.1.17+1.1.1.35|KEGG: 00903+4.2.1.17|KEGG: 00930+4.2.1.17+1.1.1.35|MetaCyc: PWY-1361|MetaCyc: PWY-5109|MetaCyc: PWY-5136|MetaCyc: PWY-5138|MetaCyc: PWY-5177|MetaCyc: PWY-5789|MetaCyc: PWY-6435|MetaCyc: PWY-6583|MetaCyc: PWY-6863|MetaCyc: PWY-6883|MetaCyc: PWY-6944|MetaCyc: PWY-6945|MetaCyc: PWY-6946|MetaCyc: PWY-7007|MetaCyc: PWY-7046|MetaCyc: PWY-7094|MetaCyc: PWY-7216|MetaCyc: PWY-735|MetaCyc: PWY-7401|MetaCyc: PWY-7606|MetaCyc: PWY-7654|MetaCyc: PWY-7656|MetaCyc: PWY-7726|MetaCyc: PWY-7778|MetaCyc: PWY-7779 CDA09_13605 2ed6cc94926f3aa75209040609bbfb1b 301 PIRSF PIRSF000105 3 298 6.4E-78 T 01-11-2018 IPR022694 3-hydroxyacyl-CoA dehydrogenase GO:0003857|GO:0006631|GO:0055114|GO:0070403 CDA09_13605 2ed6cc94926f3aa75209040609bbfb1b 301 Pfam PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain 7 186 6.1E-53 T 01-11-2018 IPR006176 3-hydroxyacyl-CoA dehydrogenase, NAD binding GO:0003857|GO:0006631|GO:0016491|GO:0055114 KEGG: 00062+4.2.1.17+1.1.1.35|KEGG: 00071+4.2.1.17+1.1.1.35|KEGG: 00120+1.1.1.35|KEGG: 00280+4.2.1.17+1.1.1.35|KEGG: 00281+4.2.1.17+1.1.1.35|KEGG: 00310+4.2.1.17+1.1.1.35|KEGG: 00360+4.2.1.17|KEGG: 00362+4.2.1.17+1.1.1.35|KEGG: 00380+4.2.1.17+1.1.1.35|KEGG: 00410+4.2.1.17|KEGG: 00592+4.2.1.17|KEGG: 00623+1.1.1.35|KEGG: 00627+4.2.1.17|KEGG: 00640+4.2.1.17|KEGG: 00650+4.2.1.17+1.1.1.35|KEGG: 00720+4.2.1.17+1.1.1.35|KEGG: 00903+4.2.1.17|KEGG: 00930+4.2.1.17+1.1.1.35|MetaCyc: PWY-1361|MetaCyc: PWY-5109|MetaCyc: PWY-5136|MetaCyc: PWY-5138|MetaCyc: PWY-5177|MetaCyc: PWY-5789|MetaCyc: PWY-6435|MetaCyc: PWY-6583|MetaCyc: PWY-6863|MetaCyc: PWY-6883|MetaCyc: PWY-6944|MetaCyc: PWY-6945|MetaCyc: PWY-6946|MetaCyc: PWY-7007|MetaCyc: PWY-7046|MetaCyc: PWY-7094|MetaCyc: PWY-7216|MetaCyc: PWY-735|MetaCyc: PWY-7401|MetaCyc: PWY-7606|MetaCyc: PWY-7654|MetaCyc: PWY-7656|MetaCyc: PWY-7726|MetaCyc: PWY-7778|MetaCyc: PWY-7779 CDA09_12200 170aecaf0991efc88baef9745e7bebfc 724 Pfam PF07793 Protein of unknown function (DUF1631) 28 722 2.3E-158 T 01-11-2018 IPR012434 Protein of unknown function DUF1631 CDA09_06465 e70d5e2a2bfd193e5023d5ad2cb0384a 65 Pfam PF05433 Glycine zipper 2TM domain 26 63 1.3E-6 T 01-11-2018 IPR008816 Glycine zipper 2TM domain GO:0019867 CDA09_14160 d76d769f6be2669f9f94f190d51b5d49 354 Pfam PF06250 Protein of unknown function (DUF1016) 19 336 4.3E-114 T 01-11-2018 IPR009362 Protein of unknown function DUF1016 CDA09_15675 1432df4b77cff947d39885407c2ff1a5 494 Pfam PF00501 AMP-binding enzyme 15 390 3.3E-69 T 01-11-2018 IPR000873 AMP-dependent synthetase/ligase GO:0003824 CDA09_15675 1432df4b77cff947d39885407c2ff1a5 494 Gene3D G3DSA:3.30.300.30 384 493 2.5E-17 T 01-11-2018 CDA09_15675 1432df4b77cff947d39885407c2ff1a5 494 SUPERFAMILY SSF56801 14 487 1.09E-105 T 01-11-2018 CDA09_15675 1432df4b77cff947d39885407c2ff1a5 494 Gene3D G3DSA:3.40.50.12780 8 383 1.3E-88 T 01-11-2018 CDA09_14730 0342501e82a919cc16baa8c08a40efec 379 Pfam PF13458 Periplasmic binding protein 25 370 3.7E-51 T 01-11-2018 IPR028081 Leucine-binding protein domain CDA09_14730 0342501e82a919cc16baa8c08a40efec 379 Gene3D G3DSA:3.40.50.2300 140 373 1.7E-113 T 01-11-2018 CDA09_14730 0342501e82a919cc16baa8c08a40efec 379 SUPERFAMILY SSF53822 24 378 2.19E-70 T 01-11-2018 IPR028082 Periplasmic binding protein-like I CDA09_14730 0342501e82a919cc16baa8c08a40efec 379 Gene3D G3DSA:3.40.50.2300 27 361 1.7E-113 T 01-11-2018 CDA09_04505 ec2d268cc5b7cbb4440ea28df0cbe520 24 Pfam PF08042 PqqA family 2 20 9.1E-10 T 01-11-2018 IPR011725 Coenzyme PQQ biosynthesis protein A GO:0018189 CDA09_04505 ec2d268cc5b7cbb4440ea28df0cbe520 24 TIGRFAM TIGR02107 PQQ_syn_pqqA: coenzyme PQQ precursor peptide PqqA 3 22 3.7E-9 T 01-11-2018 IPR011725 Coenzyme PQQ biosynthesis protein A GO:0018189 CDA09_04430 d0389cb18f79629dc2f3daf28aa24388 215 PIRSF PIRSF006170 2 215 4.6E-48 T 01-11-2018 IPR026039 Uncharacterised protein family UPF0070 CDA09_04430 d0389cb18f79629dc2f3daf28aa24388 215 Gene3D G3DSA:1.25.40.10 53 167 9.8E-8 T 01-11-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 CDA09_04430 d0389cb18f79629dc2f3daf28aa24388 215 Pfam PF09976 Tetratricopeptide repeat-like domain 16 214 3.4E-58 T 01-11-2018 IPR018704 Tetratricopeptide repeat-like domain Reactome: R-HSA-192823|Reactome: R-HSA-381038|Reactome: R-HSA-381426|Reactome: R-HSA-6798695|Reactome: R-HSA-8957275 CDA09_16795 6b7f0a7da616f65d81b0af0a2c5398e1 235 Pfam PF13386 Cytochrome C biogenesis protein transmembrane region 8 214 1.0E-54 T 01-11-2018 IPR039447 Urease accessory protein UreH-like, transmembrane domain CDA09_02010 5168d376536c960f593cd6c669a5da6e 167 Pfam PF02036 SCP-2 sterol transfer family 44 131 2.5E-11 T 01-11-2018 IPR003033 SCP2 sterol-binding domain CDA09_02010 5168d376536c960f593cd6c669a5da6e 167 SUPERFAMILY SSF55718 24 138 2.94E-16 T 01-11-2018 IPR036527 SCP2 sterol-binding domain superfamily CDA09_22270 cc924980307b6cfe37d50a640bd7ce27 213 SMART SM00849 13 193 8.8E-37 T 01-11-2018 IPR001279 Metallo-beta-lactamase CDA09_22270 cc924980307b6cfe37d50a640bd7ce27 213 SUPERFAMILY SSF56281 3 209 5.96E-58 T 01-11-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like CDA09_22270 cc924980307b6cfe37d50a640bd7ce27 213 Gene3D G3DSA:3.60.15.10 2 211 1.3E-80 T 01-11-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like CDA09_22270 cc924980307b6cfe37d50a640bd7ce27 213 Pfam PF00753 Metallo-beta-lactamase superfamily 11 193 2.0E-31 T 01-11-2018 IPR001279 Metallo-beta-lactamase CDA09_05490 e0fbf105c6724e6de812b15255ada530 214 Pfam PF01464 Transglycosylase SLT domain 92 181 6.7E-15 T 01-11-2018 IPR008258 Transglycosylase SLT domain 1 CDA09_05490 e0fbf105c6724e6de812b15255ada530 214 Gene3D G3DSA:1.10.530.10 81 205 1.1E-21 T 01-11-2018 CDA09_05490 e0fbf105c6724e6de812b15255ada530 214 SUPERFAMILY SSF53955 87 204 8.09E-29 T 01-11-2018 IPR023346 Lysozyme-like domain superfamily CDA09_20775 2ec8ca3f64fbe2bf66ba120c5307085a 106 Pfam PF14076 Domain of unknown function (DUF4258) 30 103 8.5E-9 T 01-11-2018 IPR025354 Protein of unknown function DUF4258 CDA09_01115 5c467cd9928303bbe6f1174dd6352f4c 193 Gene3D G3DSA:1.10.760.10 101 189 1.8E-17 T 01-11-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 CDA09_01115 5c467cd9928303bbe6f1174dd6352f4c 193 SUPERFAMILY SSF46626 103 188 1.27E-15 T 01-11-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 CDA09_01115 5c467cd9928303bbe6f1174dd6352f4c 193 SUPERFAMILY SSF46626 30 97 8.18E-11 T 01-11-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 CDA09_01115 5c467cd9928303bbe6f1174dd6352f4c 193 PIRSF PIRSF000005 3 190 7.3E-31 T 01-11-2018 IPR024167 Cytochrome c4-like GO:0005506|GO:0009055|GO:0020037|GO:0042597 CDA09_01115 5c467cd9928303bbe6f1174dd6352f4c 193 Gene3D G3DSA:1.10.760.10 23 98 1.7E-14 T 01-11-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 CDA09_05345 cb48096259767d9c9c8202b8b963ea7c 226 Pfam PF01794 Ferric reductase like transmembrane component 57 163 1.1E-14 T 01-11-2018 IPR013130 Ferric reductase transmembrane component-like domain CDA09_05345 cb48096259767d9c9c8202b8b963ea7c 226 Hamap MF_01207 Protein-methionine-sulfoxide reductase heme-binding subunit MsrQ [msrQ]. 9 203 22.455 T 01-11-2018 IPR022837 Protein-methionine-sulfoxide reductase subunit MsrQ GO:0005887|GO:0030091 CDA09_08665 5ad99a5ecbba4cb32e51317a865d1647 247 Gene3D G3DSA:3.40.50.12500 1 242 7.5E-73 T 01-11-2018 CDA09_08665 5ad99a5ecbba4cb32e51317a865d1647 247 Pfam PF01177 Asp/Glu/Hydantoin racemase 7 209 3.2E-8 T 01-11-2018 IPR015942 Asp/Glu/hydantoin racemase GO:0006807|GO:0036361 KEGG: 00471+5.1.1.3|MetaCyc: PWY-6386|MetaCyc: PWY-6387 CDA09_04920 dd484bb802f880f8f3257be93151f9ad 434 TIGRFAM TIGR02039 CysD: sulfate adenylyltransferase, small subunit 141 434 1.7E-149 T 01-11-2018 IPR011784 Sulphate adenylyltransferase, small subunit GO:0004781|GO:0019419 KEGG: 00230+2.7.7.4|KEGG: 00261+2.7.7.4|KEGG: 00450+2.7.7.4|KEGG: 00920+2.7.7.4|MetaCyc: PWY-5278|MetaCyc: PWY-5340|MetaCyc: PWY-6683|MetaCyc: PWY-6932 CDA09_04920 dd484bb802f880f8f3257be93151f9ad 434 Pfam PF01507 Phosphoadenosine phosphosulfate reductase family 161 389 2.3E-62 T 01-11-2018 IPR002500 Phosphoadenosine phosphosulphate reductase GO:0003824 Reactome: R-HSA-196843 CDA09_04920 dd484bb802f880f8f3257be93151f9ad 434 SUPERFAMILY SSF52402 140 342 3.29E-71 T 01-11-2018 CDA09_04920 dd484bb802f880f8f3257be93151f9ad 434 Hamap MF_00064 Sulfate adenylyltransferase subunit 2 [cysD]. 136 434 54.024 T 01-11-2018 IPR011784 Sulphate adenylyltransferase, small subunit GO:0004781|GO:0019419 KEGG: 00230+2.7.7.4|KEGG: 00261+2.7.7.4|KEGG: 00450+2.7.7.4|KEGG: 00920+2.7.7.4|MetaCyc: PWY-5278|MetaCyc: PWY-5340|MetaCyc: PWY-6683|MetaCyc: PWY-6932 CDA09_04920 dd484bb802f880f8f3257be93151f9ad 434 Gene3D G3DSA:3.40.50.620 139 344 1.3E-61 T 01-11-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold CDA09_16975 58151388655b742dbdc022f89f5bf69b 307 Pfam PF00106 short chain dehydrogenase 8 204 3.9E-44 T 01-11-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CDA09_16975 58151388655b742dbdc022f89f5bf69b 307 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 82 93 1.1E-19 T 01-11-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CDA09_16975 58151388655b742dbdc022f89f5bf69b 307 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 182 199 1.1E-19 T 01-11-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CDA09_16975 58151388655b742dbdc022f89f5bf69b 307 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 8 25 1.1E-19 T 01-11-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CDA09_16975 58151388655b742dbdc022f89f5bf69b 307 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 133 149 1.1E-19 T 01-11-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CDA09_16975 58151388655b742dbdc022f89f5bf69b 307 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 159 178 1.1E-19 T 01-11-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CDA09_16975 58151388655b742dbdc022f89f5bf69b 307 SUPERFAMILY SSF51735 1 257 9.56E-58 T 01-11-2018 IPR036291 NAD(P)-binding domain superfamily CDA09_16975 58151388655b742dbdc022f89f5bf69b 307 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 139 147 6.9E-6 T 01-11-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CDA09_16975 58151388655b742dbdc022f89f5bf69b 307 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 159 178 6.9E-6 T 01-11-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CDA09_16975 58151388655b742dbdc022f89f5bf69b 307 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 82 93 6.9E-6 T 01-11-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CDA09_16975 58151388655b742dbdc022f89f5bf69b 307 Gene3D G3DSA:3.40.50.720 1 289 1.4E-71 T 01-11-2018 CDA09_09790 e64b0316cf16dd6b3112c63fbe692915 213 Pfam PF13577 SnoaL-like domain 15 133 2.4E-19 T 01-11-2018 IPR037401 SnoaL-like domain CDA09_09790 e64b0316cf16dd6b3112c63fbe692915 213 SUPERFAMILY SSF54427 10 178 2.93E-31 T 01-11-2018 IPR032710 NTF2-like domain superfamily CDA09_09790 e64b0316cf16dd6b3112c63fbe692915 213 Gene3D G3DSA:3.10.450.50 5 145 9.1E-26 T 01-11-2018 CDA09_01670 9f1bc519f3abc3976b9059ebdebde682 558 TIGRFAM TIGR02288 PaaN_2: phenylacetic acid degradation protein paaN 7 557 0.0 T 01-11-2018 IPR011975 Phenylacetic acid degradation protein PaaN2 CDA09_01670 9f1bc519f3abc3976b9059ebdebde682 558 Gene3D G3DSA:3.40.309.10 316 523 5.5E-20 T 01-11-2018 IPR016163 Aldehyde dehydrogenase, C-terminal GO:0016491|GO:0016620|GO:0055114 CDA09_01670 9f1bc519f3abc3976b9059ebdebde682 558 Pfam PF00171 Aldehyde dehydrogenase family 92 503 1.4E-40 T 01-11-2018 IPR015590 Aldehyde dehydrogenase domain GO:0016491|GO:0055114 CDA09_01670 9f1bc519f3abc3976b9059ebdebde682 558 Gene3D G3DSA:3.40.605.10 66 312 1.7E-34 T 01-11-2018 IPR016162 Aldehyde dehydrogenase, N-terminal GO:0016491|GO:0055114 CDA09_01670 9f1bc519f3abc3976b9059ebdebde682 558 SUPERFAMILY SSF53720 70 538 3.53E-67 T 01-11-2018 IPR016161 Aldehyde/histidinol dehydrogenase GO:0016491|GO:0055114 CDA09_05920 801c34f450bd1053e8e806e07299c386 227 Gene3D G3DSA:3.40.50.1820 1 188 2.2E-55 T 01-11-2018 IPR029058 Alpha/Beta hydrolase fold CDA09_05920 801c34f450bd1053e8e806e07299c386 227 SUPERFAMILY SSF53474 3 174 3.31E-35 T 01-11-2018 IPR029058 Alpha/Beta hydrolase fold CDA09_05920 801c34f450bd1053e8e806e07299c386 227 Pfam PF06821 Serine hydrolase 5 180 4.8E-57 T 01-11-2018 IPR010662 Putative hydrolase RBBP9/YdeN GO:0016787 CDA09_01520 fa1aa3a5a5688004ce4863bbaf4672c3 338 Gene3D G3DSA:3.90.550.10 2 219 9.0E-43 T 01-11-2018 IPR029044 Nucleotide-diphospho-sugar transferases CDA09_01520 fa1aa3a5a5688004ce4863bbaf4672c3 338 SUPERFAMILY SSF53448 2 258 8.72E-49 T 01-11-2018 IPR029044 Nucleotide-diphospho-sugar transferases CDA09_01520 fa1aa3a5a5688004ce4863bbaf4672c3 338 Pfam PF00535 Glycosyl transferase family 2 8 119 5.9E-22 T 01-11-2018 IPR001173 Glycosyltransferase 2-like Reactome: R-HSA-913709 CDA09_21780 7f5fbed2896a91426bd4d3b89a18a2be 378 SUPERFAMILY SSF52096 52 344 3.56E-47 T 01-11-2018 IPR029045 ClpP/crotonase-like domain superfamily CDA09_21780 7f5fbed2896a91426bd4d3b89a18a2be 378 TIGRFAM TIGR03200 dearomat_oah: 6-oxocyclohex-1-ene-1-carbonyl-CoA hydrolase 19 373 3.5E-170 T 01-11-2018 IPR017613 6-oxocyclohex-1-ene-1-carbonyl-CoA hydrolase KEGG: 00362+3.7.1.21 CDA09_21780 7f5fbed2896a91426bd4d3b89a18a2be 378 Pfam PF00378 Enoyl-CoA hydratase/isomerase 52 230 2.6E-30 T 01-11-2018 IPR001753 Enoyl-CoA hydratase/isomerase GO:0003824 CDA09_09555 3f856fcf8eb561494b13dcf520306ba3 333 Pfam PF13310 Virulence protein RhuM family 67 135 1.0E-23 T 01-11-2018 IPR011204 Virulence protein RhuM-like CDA09_09555 3f856fcf8eb561494b13dcf520306ba3 333 Pfam PF02661 Fic/DOC family 252 285 6.4E-10 T 01-11-2018 IPR003812 Fido domain CDA09_09555 3f856fcf8eb561494b13dcf520306ba3 333 Gene3D G3DSA:1.20.120.1870 203 331 3.3E-16 T 01-11-2018 CDA09_09555 3f856fcf8eb561494b13dcf520306ba3 333 SUPERFAMILY SSF140931 251 291 1.31E-7 T 01-11-2018 IPR036597 Fido-like domain superfamily CDA09_15380 4b6188ace4293f108c9b9103368b7d6e 374 Gene3D G3DSA:2.120.10.30 80 232 8.2E-22 T 01-11-2018 IPR011042 Six-bladed beta-propeller, TolB-like CDA09_15380 4b6188ace4293f108c9b9103368b7d6e 374 Gene3D G3DSA:2.120.10.30 233 372 4.1E-36 T 01-11-2018 IPR011042 Six-bladed beta-propeller, TolB-like CDA09_15380 4b6188ace4293f108c9b9103368b7d6e 374 Pfam PF08450 SMP-30/Gluconolaconase/LRE-like region 181 328 1.8E-6 T 01-11-2018 IPR013658 SMP-30/Gluconolactonase/LRE-like region CDA09_15380 4b6188ace4293f108c9b9103368b7d6e 374 SUPERFAMILY SSF101898 108 365 4.97E-42 T 01-11-2018 CDA09_02805 f63d9c9149f6812e3f906578f50576ad 198 Pfam PF06930 Protein of unknown function (DUF1282) 9 180 7.3E-35 T 01-11-2018 IPR009698 Protein of unknown function DUF1282 CDA09_22260 a3b63576b130efde17c4d93e55f5dd38 206 Pfam PF03458 UPF0126 domain 96 167 3.0E-20 T 01-11-2018 IPR005115 Uncharacterised domain UPF0126 CDA09_22260 a3b63576b130efde17c4d93e55f5dd38 206 Pfam PF03458 UPF0126 domain 13 83 1.3E-14 T 01-11-2018 IPR005115 Uncharacterised domain UPF0126 CDA09_08260 9fd0a33cbb842a0ba402daa924c5c6ae 339 Pfam PF01548 Transposase 7 145 9.5E-12 T 01-11-2018 IPR002525 Transposase, IS111A/IS1328/IS1533, N-terminal GO:0003677|GO:0004803|GO:0006313 CDA09_08260 9fd0a33cbb842a0ba402daa924c5c6ae 339 Pfam PF02371 Transposase IS116/IS110/IS902 family 212 290 2.5E-21 T 01-11-2018 IPR003346 Transposase, IS116/IS110/IS902 GO:0003677|GO:0004803|GO:0006313 CDA09_12530 88a03955768355d846c6ff4ebd7aab73 389 Pfam PF11062 Protein of unknown function (DUF2863) 5 386 1.6E-166 T 01-11-2018 IPR021292 Protein of unknown function DUF2863 CDA09_02460 005d22744e5eafdf3e0ebe1f3241c375 320 PIRSF PIRSF005355 12 319 3.7E-55 T 01-11-2018 IPR026046 UbiA prenyltransferase domain containing protein 1 GO:0004659 Reactome: R-HSA-6806664 CDA09_02460 005d22744e5eafdf3e0ebe1f3241c375 320 Pfam PF01040 UbiA prenyltransferase family 37 287 1.4E-29 T 01-11-2018 IPR000537 UbiA prenyltransferase family GO:0016021|GO:0016765 CDA09_07125 9ffe437e9c25fbfdcf94604044c918b4 151 Pfam PF05425 Copper resistance protein D 48 146 9.1E-12 T 01-11-2018 IPR008457 Copper resistance protein D GO:0016021 CDA09_03610 04f86cbfeee72399340ec2581851902b 252 Gene3D G3DSA:1.25.40.590 18 184 1.4E-38 T 01-11-2018 IPR038522 Type IV / VI secretion system, DotU superfamily CDA09_03610 04f86cbfeee72399340ec2581851902b 252 TIGRFAM TIGR03349 IV_VI_DotU: type IV/VI secretion system protein, DotU family 22 224 1.2E-51 T 01-11-2018 IPR017732 Type IV / VI secretion system, DotU CDA09_03610 04f86cbfeee72399340ec2581851902b 252 Pfam PF09850 Type VI secretion system protein DotU 23 220 6.0E-52 T 01-11-2018 IPR017732 Type IV / VI secretion system, DotU CDA09_09995 e860ee689ae6f5d2f9d78bc2b7d85eab 141 SUPERFAMILY SSF50249 6 133 1.49E-33 T 01-11-2018 IPR012340 Nucleic acid-binding, OB-fold CDA09_09995 e860ee689ae6f5d2f9d78bc2b7d85eab 141 Pfam PF01796 DUF35 OB-fold domain, acyl-CoA-associated 60 124 1.4E-19 T 01-11-2018 IPR002878 Domain of unknown function DUF35, OB-fold, C-terminal CDA09_09995 e860ee689ae6f5d2f9d78bc2b7d85eab 141 Pfam PF12172 Rubredoxin-like zinc ribbon domain (DUF35_N) 26 58 5.6E-9 T 01-11-2018 IPR022002 Domain of unknown function DUF35, rubredoxin-like zinc ribbon domain, N-terminal CDA09_22720 751cbe5115413c5f090ee9afa3a463d9 155 Pfam PF16155 Domain of unknown function (DUF4863) 9 152 5.9E-57 T 01-11-2018 IPR032345 Protein of unknown function DUF4863 CDA09_22365 bcfca6d9cbde7f7cf424cbfaea2bec7e 249 Pfam PF07505 Protein of unknown function (DUF5131) 5 242 3.7E-99 T 01-11-2018 IPR011101 Protein of unknown function DUF5131 CDA09_18990 cac9a15645dd0db1811416db9e5b14d1 119 SUPERFAMILY SSF49503 20 117 1.79E-16 T 01-11-2018 IPR008972 Cupredoxin CDA09_18990 cac9a15645dd0db1811416db9e5b14d1 119 Gene3D G3DSA:2.60.40.420 22 119 8.7E-17 T 01-11-2018 IPR008972 Cupredoxin CDA09_18990 cac9a15645dd0db1811416db9e5b14d1 119 Pfam PF13473 Cupredoxin-like domain 15 117 8.4E-22 T 01-11-2018 IPR028096 EfeO-type cupredoxin-like domain CDA09_11675 f0f0c13dca3dc61062910d74116b4aec 339 Pfam PF01758 Sodium Bile acid symporter family 47 241 1.9E-35 T 01-11-2018 IPR002657 Bile acid:sodium symporter/arsenical resistance protein Acr3 GO:0016020 CDA09_11675 f0f0c13dca3dc61062910d74116b4aec 339 Gene3D G3DSA:1.20.1530.20 1 330 1.2E-16 T 01-11-2018 IPR038770 Sodium/solute symporter superfamily CDA09_11675 f0f0c13dca3dc61062910d74116b4aec 339 TIGRFAM TIGR00832 acr3: arsenical-resistance protein 1 328 3.6E-117 T 01-11-2018 IPR004706 Arsenical-resistance protein Acr3 GO:0015103|GO:0015297|GO:0016021 CDA09_11675 f0f0c13dca3dc61062910d74116b4aec 339 PIRSF PIRSF005508 1 339 2.9E-115 T 01-11-2018 IPR004706 Arsenical-resistance protein Acr3 GO:0015103|GO:0015297|GO:0016021 CDA09_16015 876214461234c3fad94aca110a902dc7 348 Pfam PF01136 Peptidase family U32 85 327 1.5E-40 T 01-11-2018 IPR001539 Peptidase U32 GO:0006508|GO:0008233 CDA09_05480 5917eaf6176c7c855b687c80dde91ba4 213 Pfam PF04519 Polymer-forming cytoskeletal 86 181 4.5E-18 T 01-11-2018 IPR007607 Bactofilin A/B CDA09_06555 794d38950bbdb7e644dd8c7eafbb78e5 186 Pfam PF01814 Hemerythrin HHE cation binding domain 52 181 6.4E-12 T 01-11-2018 IPR012312 Haemerythrin-like Reactome: R-HSA-390471|Reactome: R-HSA-8951664|Reactome: R-HSA-917937|Reactome: R-HSA-983168 CDA09_06555 794d38950bbdb7e644dd8c7eafbb78e5 186 Gene3D G3DSA:1.20.120.520 47 184 3.6E-7 T 01-11-2018 CDA09_10195 8551b1dd457ecc6dd9286e0355592e97 501 Gene3D G3DSA:1.10.620.20 1 499 2.4E-183 T 01-11-2018 IPR012348 Ribonucleotide reductase-like GO:0016491|GO:0055114 Reactome: R-HSA-499943 CDA09_10195 8551b1dd457ecc6dd9286e0355592e97 501 Pfam PF04945 YHS domain 408 447 8.0E-9 T 01-11-2018 IPR007029 YHS domain CDA09_10195 8551b1dd457ecc6dd9286e0355592e97 501 SUPERFAMILY SSF47240 3 492 1.62E-163 T 01-11-2018 IPR009078 Ferritin-like superfamily CDA09_10195 8551b1dd457ecc6dd9286e0355592e97 501 Pfam PF02332 Methane/Phenol/Toluene Hydroxylase 18 248 3.9E-75 T 01-11-2018 IPR003430 Methane/phenol/toluene hydroxylase GO:0006725|GO:0055114 CDA09_13640 d44c200270f3a5718fce098e3474528e 106 PRINTS PR00355 Adrenodoxin signature 82 90 2.6E-5 T 01-11-2018 IPR001055 Adrenodoxin GO:0009055|GO:0051537 Reactome: R-HSA-1362409|Reactome: R-HSA-196108|Reactome: R-HSA-211976|Reactome: R-HSA-2395516|Reactome: R-HSA-5579026 CDA09_13640 d44c200270f3a5718fce098e3474528e 106 PRINTS PR00355 Adrenodoxin signature 40 50 2.6E-5 T 01-11-2018 IPR001055 Adrenodoxin GO:0009055|GO:0051537 Reactome: R-HSA-1362409|Reactome: R-HSA-196108|Reactome: R-HSA-211976|Reactome: R-HSA-2395516|Reactome: R-HSA-5579026 CDA09_13640 d44c200270f3a5718fce098e3474528e 106 PRINTS PR00355 Adrenodoxin signature 59 73 2.6E-5 T 01-11-2018 IPR001055 Adrenodoxin GO:0009055|GO:0051537 Reactome: R-HSA-1362409|Reactome: R-HSA-196108|Reactome: R-HSA-211976|Reactome: R-HSA-2395516|Reactome: R-HSA-5579026 CDA09_13640 d44c200270f3a5718fce098e3474528e 106 SUPERFAMILY SSF54292 3 103 4.52E-29 T 01-11-2018 IPR036010 2Fe-2S ferredoxin-like superfamily GO:0009055|GO:0051536 CDA09_13640 d44c200270f3a5718fce098e3474528e 106 Pfam PF00111 2Fe-2S iron-sulfur cluster binding domain 7 90 7.2E-13 T 01-11-2018 IPR001041 2Fe-2S ferredoxin-type iron-sulfur binding domain GO:0009055|GO:0051536 CDA09_13640 d44c200270f3a5718fce098e3474528e 106 Gene3D G3DSA:3.10.20.30 1 106 3.7E-32 T 01-11-2018 IPR012675 Beta-grasp domain superfamily CDA09_14855 12e33a9f847fee1c9d6b6a5b48d76d1a 152 Pfam PF10627 Curli assembly protein CsgE 46 150 6.5E-24 T 01-11-2018 IPR018900 Curli assembly protein CsgE CDA09_12245 c235a96bc57b304207cce5a1444bd9f6 433 Pfam PF11862 Domain of unknown function (DUF3382) 16 108 1.4E-17 T 01-11-2018 IPR021807 High-affinity branched-chain amino acid transport system permease, LivHM, N-terminal CDA09_12245 c235a96bc57b304207cce5a1444bd9f6 433 Pfam PF02653 Branched-chain amino acid transport system / permease component 120 406 1.1E-51 T 01-11-2018 IPR001851 ABC transporter, permease GO:0016020|GO:0022857|GO:0055085 CDA09_15220 5520aef3ea26793a28a29d6536d84546 121 Pfam PF16137 Domain of unknown function (DUF4845) 31 114 9.5E-25 T 01-11-2018 IPR032314 Protein of unknown function DUF4845 CDA09_09005 d5be255ce8862ce04a346c8ad3e5936b 960 Gene3D G3DSA:3.40.50.740 47 949 8.6E-284 T 01-11-2018 CDA09_09005 d5be255ce8862ce04a346c8ad3e5936b 960 Pfam PF01568 Molydopterin dinucleotide binding domain 818 919 9.4E-20 T 01-11-2018 IPR006657 Molybdopterin dinucleotide-binding domain GO:0016491|GO:0043546|GO:0055114 CDA09_09005 d5be255ce8862ce04a346c8ad3e5936b 960 Pfam PF00384 Molybdopterin oxidoreductase 124 672 1.6E-55 T 01-11-2018 IPR006656 Molybdopterin oxidoreductase GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 CDA09_09005 d5be255ce8862ce04a346c8ad3e5936b 960 SUPERFAMILY SSF53706 42 665 1.03E-134 T 01-11-2018 CDA09_09005 d5be255ce8862ce04a346c8ad3e5936b 960 SUPERFAMILY SSF50692 812 951 4.75E-32 T 01-11-2018 IPR009010 Aspartate decarboxylase-like domain superfamily CDA09_03190 a98957588f4392527080a04c69f98424 473 ProSitePatterns PS00218 Amino acid permeases signature. 52 82 - T 01-11-2018 IPR004840 Amino acid permease, conserved site GO:0006865|GO:0016021|GO:0055085 CDA09_03190 a98957588f4392527080a04c69f98424 473 Gene3D G3DSA:1.20.1740.10 20 468 2.9E-56 T 01-11-2018 CDA09_03190 a98957588f4392527080a04c69f98424 473 Pfam PF00324 Amino acid permease 27 460 4.6E-112 T 01-11-2018 IPR004841 Amino acid permease/ SLC12A domain GO:0016020|GO:0055085 CDA09_03190 a98957588f4392527080a04c69f98424 473 PIRSF PIRSF006060 2 470 7.8E-67 T 01-11-2018 IPR002293 Amino acid/polyamine transporter I GO:0016020|GO:0022857|GO:0055085 CDA09_09315 5a2bd44c90f414508ecebe1d038abc50 141 SUPERFAMILY SSF46689 19 65 3.23E-7 T 01-11-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 CDA09_09315 5a2bd44c90f414508ecebe1d038abc50 141 Pfam PF01527 Transposase 17 72 1.5E-10 T 01-11-2018 IPR002514 Transposase IS3/IS911family GO:0003677|GO:0004803|GO:0006313 CDA09_07905 7683e695b9e03a400cf924824cee11a1 620 Hamap MF_01522 Low affinity potassium transport system protein kup [kup]. 3 620 34.269 T 01-11-2018 IPR023051 Potassium uptake protein, low affinity, Kup CDA09_07905 7683e695b9e03a400cf924824cee11a1 620 Pfam PF02705 K+ potassium transporter 12 541 1.9E-207 T 01-11-2018 IPR003855 Potassium transporter GO:0015079|GO:0016020|GO:0071805 CDA09_03585 09087023162439743275b1fa13d64319 875 Pfam PF04168 A predicted alpha-helical domain with a conserved ER motif. 516 863 1.8E-66 T 01-11-2018 IPR007296 Domain of unknown function DUF403 CDA09_03585 09087023162439743275b1fa13d64319 875 SUPERFAMILY SSF56059 27 422 1.94E-23 T 01-11-2018 CDA09_03585 09087023162439743275b1fa13d64319 875 Gene3D G3DSA:3.30.1490.270 355 414 3.7E-6 T 01-11-2018 CDA09_03585 09087023162439743275b1fa13d64319 875 Pfam PF14403 Circularly permuted ATP-grasp type 2 82 466 2.1E-159 T 01-11-2018 IPR025841 Circularly permuted ATP-grasp type 2 CDA09_03585 09087023162439743275b1fa13d64319 875 Gene3D G3DSA:3.40.50.11290 222 318 1.2E-40 T 01-11-2018 CDA09_06525 5c1d7b6756075f2431b8b6024a1e0537 213 SMART SM00974 12 91 1.3E-16 T 01-11-2018 IPR018306 Bacteriophage T5, Orf172 DNA-binding CDA09_06525 5c1d7b6756075f2431b8b6024a1e0537 213 Pfam PF10544 T5orf172 domain 4 84 2.2E-14 T 01-11-2018 IPR018306 Bacteriophage T5, Orf172 DNA-binding CDA09_00950 83266514364658a61cec58e93f719a1d 186 Pfam PF05433 Glycine zipper 2TM domain 72 113 1.3E-9 T 01-11-2018 IPR008816 Glycine zipper 2TM domain GO:0019867 CDA09_03965 056e528ab9f9016d84369a8dd2c85401 385 Pfam PF13091 PLD-like domain 215 340 3.1E-24 T 01-11-2018 IPR025202 Phospholipase D-like domain Reactome: R-HSA-1483148|Reactome: R-HSA-1483166 CDA09_03965 056e528ab9f9016d84369a8dd2c85401 385 Pfam PF13091 PLD-like domain 24 152 3.6E-14 T 01-11-2018 IPR025202 Phospholipase D-like domain Reactome: R-HSA-1483148|Reactome: R-HSA-1483166 CDA09_03965 056e528ab9f9016d84369a8dd2c85401 385 Gene3D G3DSA:3.30.870.10 198 343 5.4E-29 T 01-11-2018 CDA09_03965 056e528ab9f9016d84369a8dd2c85401 385 Hamap MF_01917 Cardiolipin synthase B [clsB]. 1 385 47.726 T 01-11-2018 IPR030872 Cardiolipin synthase B GO:0008808|GO:0032049 CDA09_03965 056e528ab9f9016d84369a8dd2c85401 385 SUPERFAMILY SSF56024 3 183 5.23E-43 T 01-11-2018 CDA09_03965 056e528ab9f9016d84369a8dd2c85401 385 SMART SM00155 107 134 2.3E-4 T 01-11-2018 IPR001736 Phospholipase D/Transphosphatidylase GO:0003824 Reactome: R-HSA-1483148 CDA09_03965 056e528ab9f9016d84369a8dd2c85401 385 SMART SM00155 287 314 0.025 T 01-11-2018 IPR001736 Phospholipase D/Transphosphatidylase GO:0003824 Reactome: R-HSA-1483148 CDA09_03965 056e528ab9f9016d84369a8dd2c85401 385 SUPERFAMILY SSF56024 179 356 1.05E-40 T 01-11-2018 CDA09_03965 056e528ab9f9016d84369a8dd2c85401 385 Gene3D G3DSA:3.30.870.10 3 184 3.8E-40 T 01-11-2018 CDA09_21285 ef77c47b240520f6b1f51b677effb10f 430 TIGRFAM TIGR02049 gshA_ferroox: glutamate--cysteine ligase 18 422 2.9E-182 T 01-11-2018 IPR011718 Glutamate--cysteine ligase GshA CDA09_21285 ef77c47b240520f6b1f51b677effb10f 430 Gene3D G3DSA:3.40.50.11280 65 204 1.5E-47 T 01-11-2018 CDA09_21285 ef77c47b240520f6b1f51b677effb10f 430 Pfam PF08886 Glutamate-cysteine ligase 17 419 7.4E-199 T 01-11-2018 IPR011718 Glutamate--cysteine ligase GshA CDA09_15155 ea3343472c47033a04a920fa86dc5cca 425 Gene3D G3DSA:1.10.1200.160 357 390 1.7E-52 T 01-11-2018 CDA09_15155 ea3343472c47033a04a920fa86dc5cca 425 Gene3D G3DSA:2.40.128.260 233 409 1.7E-52 T 01-11-2018 CDA09_15155 ea3343472c47033a04a920fa86dc5cca 425 Pfam PF03743 Bacterial conjugation TrbI-like protein 231 411 2.4E-56 T 01-11-2018 IPR005498 Type IV secretion system, VirB10 / TraB / TrbI CDA09_08415 727b2e16f5e0f7e356bc501710168492 99 SUPERFAMILY SSF54862 12 96 1.36E-13 T 01-11-2018 CDA09_08415 727b2e16f5e0f7e356bc501710168492 99 TIGRFAM TIGR02936 fdxN_nitrog: ferredoxin III, nif-specific 8 96 3.7E-37 T 01-11-2018 IPR014283 Ferredoxin III 4[4Fe-4S], nif-specific CDA09_08415 727b2e16f5e0f7e356bc501710168492 99 Pfam PF12838 4Fe-4S dicluster domain 26 88 1.3E-6 T 01-11-2018 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain CDA09_08415 727b2e16f5e0f7e356bc501710168492 99 Gene3D G3DSA:3.30.70.20 8 99 2.1E-10 T 01-11-2018 CDA09_19350 a1cf8423b8c3bf58100fde5dbdf4e756 339 SUPERFAMILY SSF110296 7 297 2.35E-42 T 01-11-2018 CDA09_19350 a1cf8423b8c3bf58100fde5dbdf4e756 339 Gene3D G3DSA:2.130.10.10 42 190 1.9E-14 T 01-11-2018 IPR015943 WD40/YVTN repeat-like-containing domain superfamily GO:0005515 CDA09_19350 a1cf8423b8c3bf58100fde5dbdf4e756 339 Gene3D G3DSA:2.130.10.10 191 300 8.8E-7 T 01-11-2018 IPR015943 WD40/YVTN repeat-like-containing domain superfamily GO:0005515 CDA09_19350 a1cf8423b8c3bf58100fde5dbdf4e756 339 Pfam PF14870 Photosynthesis system II assembly factor YCF48 211 293 1.9E-7 T 01-11-2018 IPR028203 Photosynthesis system II assembly factor Ycf48/Hcf136-like domain CDA09_19350 a1cf8423b8c3bf58100fde5dbdf4e756 339 Pfam PF14870 Photosynthesis system II assembly factor YCF48 96 175 4.9E-7 T 01-11-2018 IPR028203 Photosynthesis system II assembly factor Ycf48/Hcf136-like domain CDA09_04590 4784f24e03b550668edec1ecd23aea52 186 Pfam PF11136 Protein of unknown function (DUF2889) 11 134 4.1E-40 T 01-11-2018 IPR021312 Protein of unknown function DUF2889 CDA09_16900 f424f10ae4aedc801bee0116a94d51be 219 Pfam PF13975 gag-polyprotein putative aspartyl protease 115 203 1.9E-21 T 01-11-2018 CDA09_16900 f424f10ae4aedc801bee0116a94d51be 219 Gene3D G3DSA:2.40.70.10 95 218 1.7E-29 T 01-11-2018 IPR021109 Aspartic peptidase domain superfamily CDA09_16900 f424f10ae4aedc801bee0116a94d51be 219 SUPERFAMILY SSF50630 106 206 6.1E-19 T 01-11-2018 IPR021109 Aspartic peptidase domain superfamily CDA09_16900 f424f10ae4aedc801bee0116a94d51be 219 TIGRFAM TIGR02281 clan_AA_DTGA: clan AA aspartic protease, TIGR02281 family 101 216 5.6E-29 T 01-11-2018 IPR011969 Clan AA aspartic peptidase, C-terminal CDA09_16900 f424f10ae4aedc801bee0116a94d51be 219 ProSitePatterns PS00141 Eukaryotic and viral aspartyl proteases active site. 124 135 - T 01-11-2018 IPR001969 Aspartic peptidase, active site GO:0004190|GO:0006508 CDA09_10560 ab4ae06c19881842f5c026047fcf2c00 505 Pfam PF01558 Pyruvate ferredoxin/flavodoxin oxidoreductase 14 204 2.7E-12 T 01-11-2018 IPR019752 Pyruvate/ketoisovalerate oxidoreductase, catalytic domain GO:0016903|GO:0055114 CDA09_10560 ab4ae06c19881842f5c026047fcf2c00 505 Gene3D G3DSA:3.40.920.10 4 217 1.5E-5 T 01-11-2018 IPR002869 Pyruvate-flavodoxin oxidoreductase, central domain GO:0016491|GO:0055114 CDA09_14835 6ad83fc0cea1839ec158f447495b06d7 130 Gene3D G3DSA:2.60.40.2420 32 129 1.9E-20 T 01-11-2018 CDA09_14835 6ad83fc0cea1839ec158f447495b06d7 130 Pfam PF10610 Thin aggregative fimbriae synthesis protein 34 118 2.7E-9 T 01-11-2018 IPR014491 Curli production protein CsgC CDA09_22760 c7889a4a8d07ae4867491f5c2493db08 193 Pfam PF01814 Hemerythrin HHE cation binding domain 6 140 4.8E-15 T 01-11-2018 IPR012312 Haemerythrin-like Reactome: R-HSA-390471|Reactome: R-HSA-8951664|Reactome: R-HSA-917937|Reactome: R-HSA-983168 CDA09_22760 c7889a4a8d07ae4867491f5c2493db08 193 Gene3D G3DSA:1.20.120.520 2 160 1.3E-30 T 01-11-2018 CDA09_21470 6ec8852fe06faabbd5519d21e1687e2c 184 Gene3D G3DSA:3.10.450.50 1 184 1.0E-65 T 01-11-2018 CDA09_21470 6ec8852fe06faabbd5519d21e1687e2c 184 SUPERFAMILY SSF54427 5 184 9.51E-50 T 01-11-2018 IPR032710 NTF2-like domain superfamily CDA09_21470 6ec8852fe06faabbd5519d21e1687e2c 184 Pfam PF00866 Ring hydroxylating beta subunit 30 176 2.5E-46 T 01-11-2018 IPR000391 Ring-hydroxylating dioxygenase beta subunit GO:0006725|GO:0055114 CDA09_13960 8dc6a7c098e4edddcd751f5d928861c4 132 SUPERFAMILY SSF46785 29 96 6.83E-5 T 01-11-2018 IPR036390 Winged helix DNA-binding domain superfamily CDA09_13960 8dc6a7c098e4edddcd751f5d928861c4 132 Gene3D G3DSA:1.10.10.10 13 97 5.9E-7 T 01-11-2018 IPR036388 Winged helix-like DNA-binding domain superfamily CDA09_12445 71521f4367fc7100172a4224acdd2d73 182 Pfam PF00857 Isochorismatase family 8 158 1.3E-23 T 01-11-2018 IPR000868 Isochorismatase-like GO:0003824 CDA09_12445 71521f4367fc7100172a4224acdd2d73 182 Gene3D G3DSA:3.40.50.850 1 181 3.7E-45 T 01-11-2018 IPR036380 Isochorismatase-like superfamily GO:0003824 CDA09_12445 71521f4367fc7100172a4224acdd2d73 182 SUPERFAMILY SSF52499 1 178 1.31E-43 T 01-11-2018 IPR036380 Isochorismatase-like superfamily GO:0003824 CDA09_07290 553e246ff29af975f3ea8ffff9328f7c 466 Gene3D G3DSA:1.20.1260.10 105 271 9.4E-9 T 01-11-2018 IPR012347 Ferritin-like CDA09_07290 553e246ff29af975f3ea8ffff9328f7c 466 Pfam PF12902 Ferritin-like 115 265 1.6E-21 T 01-11-2018 CDA09_01705 6e04bcc68c1ce7db19a1280935f57006 253 Gene3D G3DSA:1.20.1260.10 2 253 1.0E-100 T 01-11-2018 IPR012347 Ferritin-like CDA09_01705 6e04bcc68c1ce7db19a1280935f57006 253 TIGRFAM TIGR02158 PA_CoA_Oxy3: phenylacetate-CoA oxygenase, PaaI subunit 15 253 5.2E-108 T 01-11-2018 IPR011882 1,2-phenylacetyl-CoA epoxidase, subunit C GO:0010124 CDA09_01705 6e04bcc68c1ce7db19a1280935f57006 253 Pfam PF05138 Phenylacetic acid catabolic protein 5 253 1.0E-98 T 01-11-2018 IPR007814 1,2-phenylacetyl-CoA epoxidase, subunit A/C GO:0010124 CDA09_01705 6e04bcc68c1ce7db19a1280935f57006 253 PIRSF PIRSF037834 1 253 3.6E-105 T 01-11-2018 IPR011882 1,2-phenylacetyl-CoA epoxidase, subunit C GO:0010124 CDA09_01705 6e04bcc68c1ce7db19a1280935f57006 253 SUPERFAMILY SSF47240 7 247 4.46E-83 T 01-11-2018 IPR009078 Ferritin-like superfamily CDA09_21460 493543d775d66ced1d8c5b04ed44ee2a 109 SUPERFAMILY SSF50022 1 103 1.31E-29 T 01-11-2018 IPR036922 Rieske [2Fe-2S] iron-sulphur domain superfamily GO:0016491|GO:0051537|GO:0055114 CDA09_21460 493543d775d66ced1d8c5b04ed44ee2a 109 Gene3D G3DSA:2.102.10.10 1 109 6.6E-37 T 01-11-2018 IPR036922 Rieske [2Fe-2S] iron-sulphur domain superfamily GO:0016491|GO:0051537|GO:0055114 CDA09_21460 493543d775d66ced1d8c5b04ed44ee2a 109 Pfam PF00355 Rieske [2Fe-2S] domain 5 90 4.6E-19 T 01-11-2018 IPR017941 Rieske [2Fe-2S] iron-sulphur domain GO:0016491|GO:0051537|GO:0055114 CDA09_07415 2332357c1defafaf535f25ad31f895c4 425 Pfam PF07044 Protein of unknown function (DUF1329) 40 422 1.3E-80 T 01-11-2018 IPR010752 Protein of unknown function DUF1329 CDA09_13030 2991d72b550b8a57d1c783117d1f2151 245 Pfam PF17194 Transcriptional regulator, AbiEi antitoxin N-terminal domain 6 95 8.8E-29 T 01-11-2018 IPR033455 Transcriptional regulator AbiEi antitoxin, N-terminal domain CDA09_13030 2991d72b550b8a57d1c783117d1f2151 245 Pfam PF11459 Transcriptional regulator, AbiEi antitoxin, Type IV TA system 98 240 2.5E-37 T 01-11-2018 IPR021561 Transcriptional regulator, AbiEi 3 antitoxin, Type IV TA system CDA09_00065 11751689d269d9b60c5dc58a403045a5 68 Gene3D G3DSA:2.10.260.10 3 67 1.1E-5 T 01-11-2018 CDA09_09200 8101e4927f256260cc826609d1526cfb 263 Gene3D G3DSA:3.40.1080.10 2 260 1.6E-64 T 01-11-2018 CDA09_09200 8101e4927f256260cc826609d1526cfb 263 SUPERFAMILY SSF100950 4 258 5.12E-48 T 01-11-2018 IPR037171 NagB/RpiA transferase-like CDA09_09200 8101e4927f256260cc826609d1526cfb 263 SMART SM00882 10 223 3.1E-5 T 01-11-2018 IPR004165 Coenzyme A transferase family I GO:0008410 Reactome: R-HSA-77108 CDA09_09200 8101e4927f256260cc826609d1526cfb 263 Pfam PF01144 Coenzyme A transferase 101 222 6.9E-10 T 01-11-2018 IPR004165 Coenzyme A transferase family I GO:0008410 Reactome: R-HSA-77108 CDA09_04110 703f0091834ce7b52668ddf18fdcd1c3 335 Pfam PF04245 37-kD nucleoid-associated bacterial protein 13 329 9.0E-65 T 01-11-2018 IPR007358 Nucleoid-associated protein NdpA GO:0009295 CDA09_15990 dcdfb4f6762aff607b103482a7376a7c 471 Gene3D G3DSA:3.40.50.1010 2 157 2.6E-37 T 01-11-2018 CDA09_15990 dcdfb4f6762aff607b103482a7376a7c 471 Pfam PF01936 NYN domain 10 153 1.3E-34 T 01-11-2018 IPR021139 NYN domain, limkain-b1-type CDA09_00325 f88a6a77aca63fb06a8a04a2fcb734e0 185 Pfam PF11748 Protein of unknown function (DUF3306) 4 113 3.5E-28 T 01-11-2018 IPR021735 Protein of unknown function DUF3306 CDA09_21210 cf72ba325916373ffe1cf46498e15ff7 141 Gene3D G3DSA:2.170.150.70 6 116 3.0E-20 T 01-11-2018 CDA09_21210 cf72ba325916373ffe1cf46498e15ff7 141 SUPERFAMILY SSF51316 2 99 4.39E-16 T 01-11-2018 IPR011057 Mss4-like superfamily CDA09_08220 1f36fc4690a74d1e378219051aa078d2 83 Pfam PF11666 Protein of unknown function (DUF2933) 27 76 5.3E-22 T 01-11-2018 IPR021682 Protein of unknown function DUF2933 CDA09_05645 43855d43577eeaf525a68a2ba7d5f1d5 355 SMART SM00342 259 341 1.0E-24 T 01-11-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 CDA09_05645 43855d43577eeaf525a68a2ba7d5f1d5 355 Gene3D G3DSA:1.10.10.60 238 353 5.9E-29 T 01-11-2018 CDA09_05645 43855d43577eeaf525a68a2ba7d5f1d5 355 Pfam PF12833 Helix-turn-helix domain 265 343 1.5E-21 T 01-11-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 CDA09_05645 43855d43577eeaf525a68a2ba7d5f1d5 355 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 325 341 9.6E-6 T 01-11-2018 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 CDA09_05645 43855d43577eeaf525a68a2ba7d5f1d5 355 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 310 325 9.6E-6 T 01-11-2018 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 CDA09_05645 43855d43577eeaf525a68a2ba7d5f1d5 355 SUPERFAMILY SSF46689 295 343 7.62E-13 T 01-11-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 CDA09_05645 43855d43577eeaf525a68a2ba7d5f1d5 355 Pfam PF12625 Arabinose-binding domain of AraC transcription regulator, N-term 34 215 2.3E-57 T 01-11-2018 IPR032687 HTH-type transcriptional regulator AraC-type, N-terminal CDA09_20390 fe85ab44ddf6b73089ca9bbf7ae4e86f 294 TIGRFAM TIGR01207 rmlA: glucose-1-phosphate thymidylyltransferase 5 289 9.2E-158 T 01-11-2018 IPR005907 Glucose-1-phosphate thymidylyltransferase, short form GO:0008879|GO:0045226 KEGG: 00521+2.7.7.24|KEGG: 00523+2.7.7.24|KEGG: 00525+2.7.7.24|MetaCyc: PWY-3221|MetaCyc: PWY-6808|MetaCyc: PWY-6942|MetaCyc: PWY-6953|MetaCyc: PWY-6973|MetaCyc: PWY-6974|MetaCyc: PWY-6976|MetaCyc: PWY-7104|MetaCyc: PWY-7301|MetaCyc: PWY-7312|MetaCyc: PWY-7315|MetaCyc: PWY-7316|MetaCyc: PWY-7318|MetaCyc: PWY-7413|MetaCyc: PWY-7414|MetaCyc: PWY-7440|MetaCyc: PWY-7657|MetaCyc: PWY-7688|MetaCyc: PWY-7814 CDA09_20390 fe85ab44ddf6b73089ca9bbf7ae4e86f 294 Gene3D G3DSA:3.90.550.10 1 294 3.0E-86 T 01-11-2018 IPR029044 Nucleotide-diphospho-sugar transferases CDA09_20390 fe85ab44ddf6b73089ca9bbf7ae4e86f 294 Pfam PF00483 Nucleotidyl transferase 5 240 6.2E-68 T 01-11-2018 IPR005835 Nucleotidyl transferase domain GO:0009058|GO:0016779 CDA09_20390 fe85ab44ddf6b73089ca9bbf7ae4e86f 294 SUPERFAMILY SSF53448 4 290 2.06E-93 T 01-11-2018 IPR029044 Nucleotide-diphospho-sugar transferases CDA09_01530 8545599b7e17da55d1e7c9864dd2712e 393 Gene3D G3DSA:3.40.50.2000 24 223 3.1E-8 T 01-11-2018 CDA09_01530 8545599b7e17da55d1e7c9864dd2712e 393 Gene3D G3DSA:3.40.50.2000 239 389 5.5E-17 T 01-11-2018 CDA09_01530 8545599b7e17da55d1e7c9864dd2712e 393 Pfam PF13692 Glycosyl transferases group 1 252 349 1.1E-9 T 01-11-2018 CDA09_01530 8545599b7e17da55d1e7c9864dd2712e 393 SUPERFAMILY SSF53756 24 387 5.02E-31 T 01-11-2018 CDA09_00760 1d3240f20e41664419d33023246f12cb 291 Pfam PF02653 Branched-chain amino acid transport system / permease component 18 266 3.3E-42 T 01-11-2018 IPR001851 ABC transporter, permease GO:0016020|GO:0022857|GO:0055085 CDA09_09640 1ac877c523707f6c9df06d2a91470f87 372 SUPERFAMILY SSF51412 13 358 1.98E-53 T 01-11-2018 CDA09_09640 1ac877c523707f6c9df06d2a91470f87 372 Pfam PF03060 Nitronate monooxygenase 15 349 2.3E-59 T 01-11-2018 IPR004136 Nitronate monooxygenase GO:0018580|GO:0055114 KEGG: 00910+1.13.12.16|MetaCyc: PWY-723 CDA09_21420 db5767047bc28d1c657094db6510617b 458 Pfam PF03349 Outer membrane protein transport protein (OMPP1/FadL/TodX) 28 458 1.8E-72 T 01-11-2018 IPR005017 Outer membrane protein transport protein (OMPP1/FadL/TodX) CDA09_21420 db5767047bc28d1c657094db6510617b 458 SUPERFAMILY SSF56935 28 458 1.04E-72 T 01-11-2018 CDA09_21420 db5767047bc28d1c657094db6510617b 458 Gene3D G3DSA:2.40.160.60 26 458 1.4E-126 T 01-11-2018 CDA09_17345 5b23547d52338097966fa25db833eaf4 151 Pfam PF02643 Uncharacterized ACR, COG1430 40 141 1.8E-30 T 01-11-2018 IPR003795 Protein of unknown function DUF192 CDA09_17345 5b23547d52338097966fa25db833eaf4 151 Gene3D G3DSA:2.60.120.1140 21 147 3.8E-36 T 01-11-2018 IPR038695 Saro_0823-like superfamily CDA09_08300 722aaeab1232397a826b93194ac6e8b3 249 Pfam PF01925 Sulfite exporter TauE/SafE 13 243 2.2E-28 T 01-11-2018 IPR002781 Transmembrane protein TauE-like GO:0016021 CDA09_02185 36c5a9e9e242470e01590f07052ff751 635 ProSitePatterns PS01276 Peptidase family U32 signature. 163 181 - T 01-11-2018 IPR001539 Peptidase U32 GO:0006508|GO:0008233 CDA09_02185 36c5a9e9e242470e01590f07052ff751 635 Pfam PF12392 Collagenase 385 501 8.8E-18 T 01-11-2018 IPR020988 Peptidase U32, collagenase CDA09_02185 36c5a9e9e242470e01590f07052ff751 635 Pfam PF01136 Peptidase family U32 77 307 5.1E-66 T 01-11-2018 IPR001539 Peptidase U32 GO:0006508|GO:0008233 CDA09_19845 92cf7e998b81623629c6a7ca9874cb99 158 Pfam PF13669 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily 12 122 1.6E-22 T 01-11-2018 CDA09_19845 92cf7e998b81623629c6a7ca9874cb99 158 Gene3D G3DSA:3.10.180.10 7 148 1.8E-20 T 01-11-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase CDA09_19845 92cf7e998b81623629c6a7ca9874cb99 158 SUPERFAMILY SSF54593 4 146 2.17E-16 T 01-11-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase CDA09_21850 68151fb81b3e9ab2b405ff4dd6e75cc8 258 SUPERFAMILY SSF52540 4 245 1.78E-57 T 01-11-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CDA09_21850 68151fb81b3e9ab2b405ff4dd6e75cc8 258 Pfam PF00005 ABC transporter 22 176 3.3E-29 T 01-11-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 CDA09_21850 68151fb81b3e9ab2b405ff4dd6e75cc8 258 Gene3D G3DSA:3.40.50.300 1 248 4.6E-56 T 01-11-2018 CDA09_21850 68151fb81b3e9ab2b405ff4dd6e75cc8 258 Pfam PF12399 Branched-chain amino acid ATP-binding cassette transporter 225 246 9.1E-5 T 01-11-2018 IPR032823 Branched-chain amino acid ATP-binding cassette transporter, C-terminal CDA09_21850 68151fb81b3e9ab2b405ff4dd6e75cc8 258 SMART SM00382 30 224 2.2E-7 T 01-11-2018 IPR003593 AAA+ ATPase domain CDA09_05640 247bd1d4d06842777998b412151f83ca 447 Pfam PF11902 Protein of unknown function (DUF3422) 8 423 1.6E-153 T 01-11-2018 IPR021830 Protein of unknown function DUF3422 CDA09_15945 a24de9ecae72caeef982c4985c132fa6 418 Gene3D G3DSA:3.30.2010.10 206 288 1.9E-30 T 01-11-2018 CDA09_15945 a24de9ecae72caeef982c4985c132fa6 418 Pfam PF01435 Peptidase family M48 211 417 9.4E-39 T 01-11-2018 IPR001915 Peptidase M48 GO:0004222|GO:0006508 CDA09_15945 a24de9ecae72caeef982c4985c132fa6 418 Pfam PF16491 CAAX prenyl protease N-terminal, five membrane helices 28 207 1.1E-52 T 01-11-2018 IPR032456 CAAX prenyl protease 1, N-terminal KEGG: 00900+3.4.24.84 CDA09_17890 446b1a84d623afe8136a90339b38cd7d 377 Gene3D G3DSA:3.40.50.2300 148 277 2.8E-106 T 01-11-2018 CDA09_17890 446b1a84d623afe8136a90339b38cd7d 377 Gene3D G3DSA:3.40.50.2300 28 351 2.8E-106 T 01-11-2018 CDA09_17890 446b1a84d623afe8136a90339b38cd7d 377 PRINTS PR00337 Leu/Ile/Val-binding protein family signature 27 43 6.4E-8 T 01-11-2018 IPR000709 Leu/Ile/Val-binding protein GO:0006865 CDA09_17890 446b1a84d623afe8136a90339b38cd7d 377 PRINTS PR00337 Leu/Ile/Val-binding protein family signature 49 65 6.4E-8 T 01-11-2018 IPR000709 Leu/Ile/Val-binding protein GO:0006865 CDA09_17890 446b1a84d623afe8136a90339b38cd7d 377 PRINTS PR00337 Leu/Ile/Val-binding protein family signature 335 350 6.4E-8 T 01-11-2018 IPR000709 Leu/Ile/Val-binding protein GO:0006865 CDA09_17890 446b1a84d623afe8136a90339b38cd7d 377 SUPERFAMILY SSF53822 27 372 1.16E-97 T 01-11-2018 IPR028082 Periplasmic binding protein-like I CDA09_17890 446b1a84d623afe8136a90339b38cd7d 377 Pfam PF13458 Periplasmic binding protein 27 366 6.8E-64 T 01-11-2018 IPR028081 Leucine-binding protein domain CDA09_13295 2a2eefb4d76f7c8cee35cc6c8949cfcc 194 Pfam PF02508 Rnf-Nqr subunit, membrane protein 6 190 4.2E-60 T 01-11-2018 IPR003667 NqrDE/RnfAE GO:0016020 CDA09_13295 2a2eefb4d76f7c8cee35cc6c8949cfcc 194 PIRSF PIRSF006102 1 193 4.9E-58 T 01-11-2018 IPR003667 NqrDE/RnfAE GO:0016020 CDA09_13295 2a2eefb4d76f7c8cee35cc6c8949cfcc 194 TIGRFAM TIGR01943 rnfA: electron transport complex, RnfABCDGE type, A subunit 3 190 1.0E-83 T 01-11-2018 IPR011293 Ion-translocating oxidoreductase complex, subunit RnfA/RsxA GO:0022900 CDA09_13295 2a2eefb4d76f7c8cee35cc6c8949cfcc 194 Hamap MF_00459 Ion-translocating oxidoreductase complex subunit A [rsxA]. 2 191 25.363 T 01-11-2018 IPR011293 Ion-translocating oxidoreductase complex, subunit RnfA/RsxA GO:0022900 CDA09_11350 525db56b87a354d2022befea9c38def3 480 SUPERFAMILY SSF51717 120 328 1.03E-20 T 01-11-2018 IPR011005 Dihydropteroate synthase-like GO:0044237 Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 CDA09_01225 80eaa1304a32c61bf13808bb4225b109 199 Pfam PF01810 LysE type translocator 12 193 5.1E-12 T 01-11-2018 IPR001123 Amino acid exporter protein, LeuE-type GO:0006865|GO:0016020 CDA09_07165 3d05aa32c55ca857ea63cdb326358faf 375 Gene3D G3DSA:3.40.630.10 114 374 3.9E-63 T 01-11-2018 CDA09_07165 3d05aa32c55ca857ea63cdb326358faf 375 Gene3D G3DSA:2.60.40.3120 1 113 5.2E-43 T 01-11-2018 CDA09_07165 3d05aa32c55ca857ea63cdb326358faf 375 SUPERFAMILY SSF53187 104 370 4.3E-55 T 01-11-2018 CDA09_07165 3d05aa32c55ca857ea63cdb326358faf 375 Pfam PF00246 Zinc carboxypeptidase 131 342 1.0E-19 T 01-11-2018 IPR000834 Peptidase M14, carboxypeptidase A GO:0004181|GO:0006508|GO:0008270 CDA09_01500 4c45d18674f14057e12dd828add4c402 311 Gene3D G3DSA:3.90.550.10 1 215 7.5E-46 T 01-11-2018 IPR029044 Nucleotide-diphospho-sugar transferases CDA09_01500 4c45d18674f14057e12dd828add4c402 311 SUPERFAMILY SSF53448 2 217 5.9E-40 T 01-11-2018 IPR029044 Nucleotide-diphospho-sugar transferases CDA09_01500 4c45d18674f14057e12dd828add4c402 311 Pfam PF00535 Glycosyl transferase family 2 5 149 4.2E-29 T 01-11-2018 IPR001173 Glycosyltransferase 2-like Reactome: R-HSA-913709 CDA09_06430 02de2af0d41c11694b1b651943e65145 129 Pfam PF07681 DoxX 6 85 1.1E-16 T 01-11-2018 IPR032808 DoxX family CDA09_22160 9c816ae51c8f6b9e57ae239f39d634fc 127 SUPERFAMILY SSF50249 2 117 2.46E-25 T 01-11-2018 IPR012340 Nucleic acid-binding, OB-fold CDA09_22160 9c816ae51c8f6b9e57ae239f39d634fc 127 PIRSF PIRSF002070 1 125 2.3E-16 T 01-11-2018 CDA09_22160 9c816ae51c8f6b9e57ae239f39d634fc 127 Pfam PF00436 Single-strand binding protein family 8 109 6.0E-13 T 01-11-2018 IPR000424 Primosome PriB/single-strand DNA-binding GO:0003697 Reactome: R-HSA-2151201 CDA09_22160 9c816ae51c8f6b9e57ae239f39d634fc 127 Gene3D G3DSA:2.40.50.140 2 116 2.6E-22 T 01-11-2018 CDA09_15435 f9b66e397b6c19d3f21621861e75b231 345 PIRSF PIRSF006487 16 342 3.3E-17 T 01-11-2018 IPR028896 Aminomethyltransferase-like KEGG: 00260+2.1.2.10|KEGG: 00670+2.1.2.10|Reactome: R-HSA-6783984 CDA09_15435 f9b66e397b6c19d3f21621861e75b231 345 SUPERFAMILY SSF101790 263 342 1.18E-10 T 01-11-2018 IPR029043 Glycine cleavage T-protein/YgfZ, C-terminal CDA09_15435 f9b66e397b6c19d3f21621861e75b231 345 TIGRFAM TIGR03317 ygfZ_signature: folate-binding protein YgfZ 206 270 3.3E-27 T 01-11-2018 IPR017703 YgfZ/GcvT conserved site CDA09_15435 f9b66e397b6c19d3f21621861e75b231 345 Gene3D G3DSA:3.30.1360.120 12 341 7.2E-59 T 01-11-2018 IPR027266 GTP-binding protein TrmE/Glycine cleavage system T protein, domain 1 GO:0005515 CDA09_15435 f9b66e397b6c19d3f21621861e75b231 345 SUPERFAMILY SSF103025 22 261 1.32E-58 T 01-11-2018 CDA09_15435 f9b66e397b6c19d3f21621861e75b231 345 Pfam PF01571 Aminomethyltransferase folate-binding domain 23 221 1.1E-14 T 01-11-2018 IPR006222 Aminomethyltransferase, folate-binding domain CDA09_22130 8501fa0da4da324567077602c9ecafd3 152 SUPERFAMILY SSF81273 74 116 5.49E-11 T 01-11-2018 CDA09_22130 8501fa0da4da324567077602c9ecafd3 152 Pfam PF00816 H-NS histone family 10 109 7.8E-24 T 01-11-2018 IPR001801 Histone-like protein H-NS GO:0003677|GO:0005622|GO:0006355 CDA09_22130 8501fa0da4da324567077602c9ecafd3 152 Gene3D G3DSA:4.10.430.10 70 121 1.1E-12 T 01-11-2018 IPR037150 Histone-like protein H-NS, C-terminal domain superfamily GO:0003677 CDA09_22130 8501fa0da4da324567077602c9ecafd3 152 SMART SM00528 71 116 1.2E-11 T 01-11-2018 IPR027444 Histone-like protein H-NS, C-terminal domain GO:0003677 CDA09_02505 e97734e68abcda5a58fd4ce5ef3d0c6f 106 Gene3D G3DSA:2.20.130.30 35 106 9.3E-28 T 01-11-2018 CDA09_02505 e97734e68abcda5a58fd4ce5ef3d0c6f 106 Pfam PF11191 Protein of unknown function (DUF2782) 24 106 1.1E-32 T 01-11-2018 IPR021357 Protein of unknown function DUF2782 CDA09_17615 7c135a97b1892ed343b9d504587ecab9 88 Pfam PF05488 PAAR motif 9 80 3.5E-24 T 01-11-2018 IPR008727 PAAR motif CDA09_17615 7c135a97b1892ed343b9d504587ecab9 88 Gene3D G3DSA:2.60.200.60 18 87 2.6E-16 T 01-11-2018 CDA09_17280 d0c064c8e0b9bd8c399b8179783a0cb4 361 TIGRFAM TIGR00724 urea_amlyse_rel: biotin-dependent carboxylase uncharacterized domain 5 307 5.4E-81 T 01-11-2018 IPR003778 Carboxyltransferase domain, subdomain A and B CDA09_17280 d0c064c8e0b9bd8c399b8179783a0cb4 361 SMART SM00797 26 309 5.8E-103 T 01-11-2018 IPR003778 Carboxyltransferase domain, subdomain A and B CDA09_17280 d0c064c8e0b9bd8c399b8179783a0cb4 361 Pfam PF02626 Carboxyltransferase domain, subdomain A and B 27 291 3.6E-79 T 01-11-2018 IPR003778 Carboxyltransferase domain, subdomain A and B CDA09_17280 d0c064c8e0b9bd8c399b8179783a0cb4 361 Gene3D G3DSA:2.40.100.10 180 318 6.8E-51 T 01-11-2018 IPR029000 Cyclophilin-like domain superfamily CDA09_17280 d0c064c8e0b9bd8c399b8179783a0cb4 361 SUPERFAMILY SSF50891 183 298 1.71E-12 T 01-11-2018 IPR029000 Cyclophilin-like domain superfamily CDA09_11845 5b725a5a12ed28a09a88e7b2dd59d3d7 577 SUPERFAMILY SSF141523 330 489 1.83E-18 T 01-11-2018 IPR038063 L,D-transpeptidase catalytic domain-like CDA09_11845 5b725a5a12ed28a09a88e7b2dd59d3d7 577 SUPERFAMILY SSF47090 232 312 1.65E-15 T 01-11-2018 IPR036365 PGBD-like superfamily CDA09_11845 5b725a5a12ed28a09a88e7b2dd59d3d7 577 Pfam PF03734 L,D-transpeptidase catalytic domain 333 498 4.5E-27 T 01-11-2018 IPR005490 L,D-transpeptidase catalytic domain GO:0016740 CDA09_11845 5b725a5a12ed28a09a88e7b2dd59d3d7 577 Pfam PF01471 Putative peptidoglycan binding domain 247 305 8.7E-10 T 01-11-2018 IPR002477 Peptidoglycan binding-like CDA09_01155 fde2dca1f79e192670fb1f2f24dee98a 234 Pfam PF13457 SH3-like domain 49 74 2.4 T 01-11-2018 IPR025987 GW domain KEGG: 00511+3.2.1.96|MetaCyc: PWY-7883 CDA09_01155 fde2dca1f79e192670fb1f2f24dee98a 234 Pfam PF13457 SH3-like domain 156 189 0.28 T 01-11-2018 IPR025987 GW domain KEGG: 00511+3.2.1.96|MetaCyc: PWY-7883 CDA09_18585 a1dd90029fb7404b662e812b87d4ea19 85 Pfam PF10387 Protein of unknown function (DUF2442) 10 74 5.5E-11 T 01-11-2018 IPR018841 Protein of unknown function DUF2442 CDA09_06425 49d8b89570e6a20ae52581d4666cf2c7 184 SUPERFAMILY SSF56770 42 166 1.83E-48 T 01-11-2018 CDA09_06425 49d8b89570e6a20ae52581d4666cf2c7 184 Pfam PF01058 NADH ubiquinone oxidoreductase, 20 Kd subunit 54 164 9.7E-27 T 01-11-2018 IPR006137 NADH:ubiquinone oxidoreductase-like, 20kDa subunit GO:0051536|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 CDA09_06425 49d8b89570e6a20ae52581d4666cf2c7 184 Gene3D G3DSA:3.40.50.12280 32 177 3.7E-50 T 01-11-2018 CDA09_08500 e2176e839ee106252fde126ec984af6d 329 Pfam PF02653 Branched-chain amino acid transport system / permease component 42 306 1.1E-34 T 01-11-2018 IPR001851 ABC transporter, permease GO:0016020|GO:0022857|GO:0055085 CDA09_15090 f7ab53af654a01047b7258b57f9b7175 264 SUPERFAMILY SSF101898 24 263 1.62E-31 T 01-11-2018 CDA09_15090 f7ab53af654a01047b7258b57f9b7175 264 Gene3D G3DSA:2.120.10.30 21 261 5.4E-31 T 01-11-2018 IPR011042 Six-bladed beta-propeller, TolB-like CDA09_11955 09df34cc222c2690194afb61debe0922 207 Pfam PF02630 SCO1/SenC 68 133 4.2E-8 T 01-11-2018 IPR003782 Copper chaperone SCO1/SenC Reactome: R-HSA-5628897|Reactome: R-HSA-611105 CDA09_11955 09df34cc222c2690194afb61debe0922 207 Gene3D G3DSA:3.40.30.10 44 204 2.4E-30 T 01-11-2018 CDA09_11955 09df34cc222c2690194afb61debe0922 207 SUPERFAMILY SSF52833 67 185 7.88E-19 T 01-11-2018 IPR036249 Thioredoxin-like superfamily CDA09_10375 b2a96936609c620da48374f752bb9daf 218 Pfam PF13643 Domain of unknown function (DUF4145) 122 208 1.8E-6 T 01-11-2018 IPR025285 Domain of unknown function DUF4145 CDA09_06320 8fd9dcc0c5cbefa091a39e2d3f99356c 226 Gene3D G3DSA:3.10.100.10 37 186 3.1E-7 T 01-11-2018 IPR016186 C-type lectin-like/link domain superfamily CDA09_06320 8fd9dcc0c5cbefa091a39e2d3f99356c 226 SUPERFAMILY SSF56436 29 202 4.71E-30 T 01-11-2018 IPR016187 C-type lectin fold CDA09_13940 08308c65220740cc8aa6b6edb49e2c54 89 Pfam PF08808 RES domain 8 59 3.5E-7 T 01-11-2018 IPR014914 RES domain CDA09_21115 718aed41bc301c68d473d94cc6e6690d 253 Pfam PF03741 Integral membrane protein TerC family 15 203 1.7E-46 T 01-11-2018 IPR005496 Integral membrane protein TerC GO:0016021 CDA09_22115 a42351f462886cacf7183d3cdc9bca04 275 Pfam PF06067 Domain of unknown function (DUF932) 37 264 1.6E-59 T 01-11-2018 IPR026325 Protein of unknown function DUF932 CDA09_08095 dacaa57e8be6e3271e2b664b82c17a16 817 SUPERFAMILY SSF56747 16 169 7.85E-25 T 01-11-2018 CDA09_08095 dacaa57e8be6e3271e2b664b82c17a16 817 SMART SM00943 9 176 5.0E-28 T 01-11-2018 IPR015330 DNA primase/polymerase, bifunctional, N-terminal CDA09_08095 dacaa57e8be6e3271e2b664b82c17a16 817 Pfam PF09250 Bifunctional DNA primase/polymerase, N-terminal 9 175 5.5E-25 T 01-11-2018 IPR015330 DNA primase/polymerase, bifunctional, N-terminal CDA09_15175 ac88ff0f67d00516b270991a0281faa1 260 Pfam PF08878 Domain of unknown function (DUF1837) 31 215 2.5E-19 T 01-11-2018 IPR014976 Protein of unknown function DUF1837 CDA09_21570 f0b5d997397580ba8d5fefd822d1a719 259 SUPERFAMILY SSF48576 90 191 1.7E-7 T 01-11-2018 IPR008949 Isoprenoid synthase domain superfamily CDA09_21570 f0b5d997397580ba8d5fefd822d1a719 259 Gene3D G3DSA:1.10.600.10 76 193 1.8E-10 T 01-11-2018 IPR008949 Isoprenoid synthase domain superfamily CDA09_19170 c5c4090eab7ec54ca2ae4c541487655b 108 Pfam PF05016 ParE toxin of type II toxin-antitoxin system, parDE 6 103 6.6E-17 T 01-11-2018 IPR007712 Toxin-antitoxin system, RelE/ParE toxin family CDA09_19170 c5c4090eab7ec54ca2ae4c541487655b 108 Gene3D G3DSA:3.30.2310.20 2 107 1.5E-23 T 01-11-2018 IPR035093 Toxin-antitoxin system, RelE/ParE toxin domain superfamily CDA09_04170 983d1aef7781e05e87edd5a126acb95b 307 Pfam PF02091 Glycyl-tRNA synthetase alpha subunit 8 290 8.4E-151 T 01-11-2018 IPR002310 Glycine-tRNA ligase, alpha subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 CDA09_04170 983d1aef7781e05e87edd5a126acb95b 307 PRINTS PR01044 Glycyl-tRNA synthetase alpha subunit signature 161 176 1.5E-69 T 01-11-2018 IPR002310 Glycine-tRNA ligase, alpha subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 CDA09_04170 983d1aef7781e05e87edd5a126acb95b 307 PRINTS PR01044 Glycyl-tRNA synthetase alpha subunit signature 60 75 1.5E-69 T 01-11-2018 IPR002310 Glycine-tRNA ligase, alpha subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 CDA09_04170 983d1aef7781e05e87edd5a126acb95b 307 PRINTS PR01044 Glycyl-tRNA synthetase alpha subunit signature 138 158 1.5E-69 T 01-11-2018 IPR002310 Glycine-tRNA ligase, alpha subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 CDA09_04170 983d1aef7781e05e87edd5a126acb95b 307 PRINTS PR01044 Glycyl-tRNA synthetase alpha subunit signature 251 267 1.5E-69 T 01-11-2018 IPR002310 Glycine-tRNA ligase, alpha subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 CDA09_04170 983d1aef7781e05e87edd5a126acb95b 307 PRINTS PR01044 Glycyl-tRNA synthetase alpha subunit signature 81 101 1.5E-69 T 01-11-2018 IPR002310 Glycine-tRNA ligase, alpha subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 CDA09_04170 983d1aef7781e05e87edd5a126acb95b 307 PRINTS PR01044 Glycyl-tRNA synthetase alpha subunit signature 112 136 1.5E-69 T 01-11-2018 IPR002310 Glycine-tRNA ligase, alpha subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 CDA09_04170 983d1aef7781e05e87edd5a126acb95b 307 TIGRFAM TIGR00388 glyQ: glycine--tRNA ligase, alpha subunit 7 298 4.5E-161 T 01-11-2018 IPR002310 Glycine-tRNA ligase, alpha subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 CDA09_04170 983d1aef7781e05e87edd5a126acb95b 307 Hamap MF_00254 Glycine--tRNA ligase alpha subunit [glyQ]. 6 291 60.951 T 01-11-2018 IPR002310 Glycine-tRNA ligase, alpha subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 CDA09_04170 983d1aef7781e05e87edd5a126acb95b 307 Gene3D G3DSA:3.30.930.10 1 214 3.7E-112 T 01-11-2018 CDA09_04170 983d1aef7781e05e87edd5a126acb95b 307 Gene3D G3DSA:1.20.58.180 215 296 4.1E-34 T 01-11-2018 CDA09_04170 983d1aef7781e05e87edd5a126acb95b 307 SUPERFAMILY SSF55681 7 291 7.95E-134 T 01-11-2018 CDA09_02050 3373dec965cacd6e07697affac88d3a8 431 SUPERFAMILY SSF48695 73 265 1.32E-21 T 01-11-2018 IPR036280 Multiheme cytochrome superfamily CDA09_02050 3373dec965cacd6e07697affac88d3a8 431 Pfam PF13435 Cytochrome c554 and c-prime 77 137 1.5E-5 T 01-11-2018 IPR023155 Cytochrome c-552/4 CDA09_02050 3373dec965cacd6e07697affac88d3a8 431 Gene3D G3DSA:1.10.1130.10 50 272 1.1E-22 T 01-11-2018 CDA09_09975 629e797b1825ca3b2b0db9e88d50ecb2 456 Gene3D G3DSA:3.30.1540.10 285 383 3.7E-80 T 01-11-2018 CDA09_09975 629e797b1825ca3b2b0db9e88d50ecb2 456 Gene3D G3DSA:3.40.50.10540 68 449 3.7E-80 T 01-11-2018 IPR023606 CoA-transferase family III domain superfamily CDA09_09975 629e797b1825ca3b2b0db9e88d50ecb2 456 SUPERFAMILY SSF89796 63 455 6.15E-81 T 01-11-2018 IPR023606 CoA-transferase family III domain superfamily CDA09_09975 629e797b1825ca3b2b0db9e88d50ecb2 456 Pfam PF02515 CoA-transferase family III 68 431 5.2E-72 T 01-11-2018 IPR003673 CoA-transferase family III GO:0003824 CDA09_02765 306f078f3268452c19267f42c2c1e9ab 399 Pfam PF02687 FtsX-like permease family 304 390 1.0E-11 T 01-11-2018 IPR003838 ABC transporter permease protein domain GO:0016020 CDA09_02765 306f078f3268452c19267f42c2c1e9ab 399 Pfam PF12704 MacB-like periplasmic core domain 21 235 5.2E-34 T 01-11-2018 IPR025857 MacB-like periplasmic core domain CDA09_22300 e5bf1174d353d6e300a41b04e509a13b 319 Gene3D G3DSA:3.40.190.10 143 250 4.0E-33 T 01-11-2018 CDA09_22300 e5bf1174d353d6e300a41b04e509a13b 319 SUPERFAMILY SSF53850 76 279 8.08E-19 T 01-11-2018 CDA09_22300 e5bf1174d353d6e300a41b04e509a13b 319 Pfam PF12974 ABC transporter, phosphonate, periplasmic substrate-binding protein 63 301 1.8E-43 T 01-11-2018 CDA09_22300 e5bf1174d353d6e300a41b04e509a13b 319 Gene3D G3DSA:3.40.190.10 63 282 4.0E-33 T 01-11-2018 CDA09_13615 af5342e4573ce132cbaabcc8bb188a08 363 Pfam PF04909 Amidohydrolase 3 348 3.4E-37 T 01-11-2018 IPR006680 Amidohydrolase-related GO:0016787 CDA09_13615 af5342e4573ce132cbaabcc8bb188a08 363 SUPERFAMILY SSF51556 1 352 2.27E-78 T 01-11-2018 IPR032466 Metal-dependent hydrolase CDA09_13615 af5342e4573ce132cbaabcc8bb188a08 363 Gene3D G3DSA:3.20.20.140 1 351 5.8E-77 T 01-11-2018 CDA09_16650 81ced1b2e153485062c7b19b021d4639 217 Pfam PF03458 UPF0126 domain 12 86 3.8E-20 T 01-11-2018 IPR005115 Uncharacterised domain UPF0126 CDA09_16650 81ced1b2e153485062c7b19b021d4639 217 Pfam PF03458 UPF0126 domain 98 168 1.4E-21 T 01-11-2018 IPR005115 Uncharacterised domain UPF0126 CDA09_01170 e278f180807f4969287ec126feb27d8b 220 SUPERFAMILY SSF52833 3 217 1.76E-44 T 01-11-2018 IPR036249 Thioredoxin-like superfamily CDA09_01170 e278f180807f4969287ec126feb27d8b 220 Gene3D G3DSA:3.40.30.10 2 216 8.0E-65 T 01-11-2018 CDA09_01170 e278f180807f4969287ec126feb27d8b 220 Pfam PF01323 DSBA-like thioredoxin domain 5 209 6.8E-31 T 01-11-2018 IPR001853 DSBA-like thioredoxin domain GO:0015035 Reactome: R-HSA-156590|Reactome: R-HSA-9033241 CDA09_11075 61520a62cc95edb9a6f9d53a5a1700c3 442 Gene3D G3DSA:3.30.9.10 131 358 9.1E-50 T 01-11-2018 CDA09_11075 61520a62cc95edb9a6f9d53a5a1700c3 442 Pfam PF01266 FAD dependent oxidoreductase 37 395 2.6E-39 T 01-11-2018 IPR006076 FAD dependent oxidoreductase GO:0016491|GO:0055114 CDA09_11075 61520a62cc95edb9a6f9d53a5a1700c3 442 SUPERFAMILY SSF51905 36 404 1.9E-32 T 01-11-2018 IPR036188 FAD/NAD(P)-binding domain superfamily CDA09_11075 61520a62cc95edb9a6f9d53a5a1700c3 442 Gene3D G3DSA:3.50.50.60 37 396 9.1E-50 T 01-11-2018 IPR036188 FAD/NAD(P)-binding domain superfamily CDA09_06315 669568bf9d44fd6dff1661849aec3021 431 Pfam PF04286 Protein of unknown function (DUF445) 50 426 2.6E-107 T 01-11-2018 IPR007383 Protein of unknown function DUF445 CDA09_14790 3d2835280c986bc1155e5ae4b6d45a07 126 Gene3D G3DSA:3.30.300.130 24 125 2.1E-34 T 01-11-2018 IPR034904 Fe-S cluster assembly domain superfamily CDA09_14790 3d2835280c986bc1155e5ae4b6d45a07 126 Pfam PF01883 Iron-sulfur cluster assembly protein 30 102 8.4E-20 T 01-11-2018 IPR002744 MIP18 family-like CDA09_14790 3d2835280c986bc1155e5ae4b6d45a07 126 SUPERFAMILY SSF117916 29 124 1.96E-28 T 01-11-2018 IPR034904 Fe-S cluster assembly domain superfamily CDA09_14040 d720e0a722b1a5f348f920a95dac1b32 296 TIGRFAM TIGR03749 conj_TIGR03749: integrating conjugative element protein, PFL_4704 family 56 290 2.9E-55 T 01-11-2018 IPR021844 Integrating conjugative element protein, PFL4704 CDA09_14040 d720e0a722b1a5f348f920a95dac1b32 296 Pfam PF11920 Protein of unknown function (DUF3438) 63 286 7.2E-38 T 01-11-2018 IPR021844 Integrating conjugative element protein, PFL4704 CDA09_06885 6225404e4eafad5402b7fe25bfc9b08b 120 SUPERFAMILY SSF160214 43 118 2.22E-22 T 01-11-2018 IPR035924 FlaG-like superfamily CDA09_06885 6225404e4eafad5402b7fe25bfc9b08b 120 Pfam PF03646 FlaG protein 47 117 8.7E-22 T 01-11-2018 IPR005186 FlaG protein CDA09_06885 6225404e4eafad5402b7fe25bfc9b08b 120 Gene3D G3DSA:3.30.160.170 27 116 1.1E-15 T 01-11-2018 IPR035924 FlaG-like superfamily CDA09_02340 852277449ce0324c1f2e57140e17826a 294 SUPERFAMILY SSF103481 201 291 6.67E-14 T 01-11-2018 CDA09_02340 852277449ce0324c1f2e57140e17826a 294 SUPERFAMILY SSF103481 52 144 4.71E-14 T 01-11-2018 CDA09_02340 852277449ce0324c1f2e57140e17826a 294 Pfam PF00892 EamA-like transporter family 14 142 1.2E-13 T 01-11-2018 IPR000620 EamA domain GO:0016020|GO:0016021 CDA09_02340 852277449ce0324c1f2e57140e17826a 294 Pfam PF00892 EamA-like transporter family 162 290 1.0E-9 T 01-11-2018 IPR000620 EamA domain GO:0016020|GO:0016021 CDA09_05820 91222343db1a7ee09d7846a448c4ccdd 363 Pfam PF13795 HupE / UreJ protein 179 330 7.1E-47 T 01-11-2018 IPR032809 Putative HupE/UreJ protein CDA09_06105 4d06d3f0d12670afa4ebb6a99facfbe4 170 SUPERFAMILY SSF48695 14 156 3.68E-5 T 01-11-2018 IPR036280 Multiheme cytochrome superfamily CDA09_06105 4d06d3f0d12670afa4ebb6a99facfbe4 170 Pfam PF09626 Dihaem cytochrome c 41 156 3.9E-34 T 01-11-2018 IPR018588 Dihaem cytochrome c CDA09_01065 935e8b707f6c7e5e661924c1dc5495fa 182 Pfam PF10741 Type II secretion system (T2SS), protein M subtype b 79 180 2.1E-6 T 01-11-2018 IPR034756 Type II secretion system (T2SS), protein M subtype b CDA09_01400 38bcabf5466a80a180b99778fde46b55 143 Gene3D G3DSA:3.90.10.10 43 115 1.2E-16 T 01-11-2018 CDA09_01400 38bcabf5466a80a180b99778fde46b55 143 SUPERFAMILY SSF48695 45 114 7.45E-15 T 01-11-2018 IPR036280 Multiheme cytochrome superfamily CDA09_01400 38bcabf5466a80a180b99778fde46b55 143 TIGRFAM TIGR04257 nanowire_3heme: c(7)-type cytochrome triheme domain 48 115 2.6E-18 T 01-11-2018 IPR026352 C(7)-type cytochrome triheme domain CDA09_01400 38bcabf5466a80a180b99778fde46b55 143 Pfam PF14522 Cytochrome c7 and related cytochrome c 54 115 7.5E-9 T 01-11-2018 IPR029467 C-type polyheme cytochrome OmcB CDA09_04250 036bed2457b4a541e2e4a9b57b3e2030 206 Gene3D G3DSA:1.10.10.640 69 193 1.5E-60 T 01-11-2018 CDA09_04250 036bed2457b4a541e2e4a9b57b3e2030 206 Pfam PF05494 MlaC protein 32 195 1.9E-58 T 01-11-2018 IPR008869 Toluene tolerance Ttg2/phospholipid-binding protein MlaC CDA09_04250 036bed2457b4a541e2e4a9b57b3e2030 206 PIRSF PIRSF004649 1 206 1.5E-58 T 01-11-2018 IPR008869 Toluene tolerance Ttg2/phospholipid-binding protein MlaC CDA09_04250 036bed2457b4a541e2e4a9b57b3e2030 206 Gene3D G3DSA:3.10.450.50 32 168 1.5E-60 T 01-11-2018 CDA09_13070 16442795e347ca410da0df1a62dead5a 100 Pfam PF09907 HigB_toxin, RelE-like toxic component of a toxin-antitoxin system 19 91 6.1E-33 T 01-11-2018 IPR018669 Toxin-antitoxin system, toxin component, HigB, putative GO:0016788 CDA09_09180 e44dd8c27603cd8a75ccedc077b3737f 265 Pfam PF00378 Enoyl-CoA hydratase/isomerase 15 248 5.9E-57 T 01-11-2018 IPR001753 Enoyl-CoA hydratase/isomerase GO:0003824 CDA09_09180 e44dd8c27603cd8a75ccedc077b3737f 265 SUPERFAMILY SSF52096 4 253 2.7E-72 T 01-11-2018 IPR029045 ClpP/crotonase-like domain superfamily CDA09_09180 e44dd8c27603cd8a75ccedc077b3737f 265 Gene3D G3DSA:3.90.226.10 1 244 3.1E-79 T 01-11-2018 CDA09_06015 f4a5e40146d219b0f0240bf9a77270fa 76 Pfam PF10981 Protein of unknown function (DUF2788) 23 73 2.8E-23 T 01-11-2018 IPR021249 Protein of unknown function DUF2788 CDA09_16640 2ca394e5dfe241106d2fc1a3255b013b 190 Pfam PF03358 NADPH-dependent FMN reductase 5 148 1.7E-30 T 01-11-2018 IPR005025 NADPH-dependent FMN reductase-like GO:0016491 CDA09_16640 2ca394e5dfe241106d2fc1a3255b013b 190 Gene3D G3DSA:3.40.50.360 4 182 7.9E-44 T 01-11-2018 IPR029039 Flavoprotein-like superfamily CDA09_16640 2ca394e5dfe241106d2fc1a3255b013b 190 SUPERFAMILY SSF52218 5 175 5.76E-43 T 01-11-2018 IPR029039 Flavoprotein-like superfamily CDA09_00170 e8384760c50ca184e9f156dd2a865442 156 SUPERFAMILY SSF55961 2 151 4.94E-46 T 01-11-2018 CDA09_00170 e8384760c50ca184e9f156dd2a865442 156 Pfam PF08982 Domain of unknown function (DUF1857) 9 153 3.0E-31 T 01-11-2018 IPR015075 Acetylaranotin biosynthesis cluster protein L CDA09_00170 e8384760c50ca184e9f156dd2a865442 156 Gene3D G3DSA:3.30.530.20 1 155 2.1E-53 T 01-11-2018 IPR023393 START-like domain superfamily CDA09_12645 f0bad5315803c033810951917b825931 69 Pfam PF12843 Putative quorum-sensing-regulated virulence factor 2 67 5.8E-32 T 01-11-2018 IPR024530 Putative quorum-sensing-regulated virulence factor CDA09_12645 f0bad5315803c033810951917b825931 69 ProDom PD056452 UNCHARACTERIZED BACTERIA SIMILAR YPEB CYTOPLASMIC VCA0163 PRODUCT STM2426 GENE YPO2988 14 69 1.0E-22 T 01-11-2018 IPR024530 Putative quorum-sensing-regulated virulence factor CDA09_13140 3177166f38a95bd5aeb72765f0e0e1cd 168 Pfam PF09361 Phasin protein 6 104 1.3E-27 T 01-11-2018 IPR018968 Phasin CDA09_13140 3177166f38a95bd5aeb72765f0e0e1cd 168 TIGRFAM TIGR01841 phasin: phasin family protein 27 110 4.0E-18 T 01-11-2018 IPR010127 Phasin, subfamily 1 CDA09_10830 74475212da7e6628adce69c9bac57e28 299 SUPERFAMILY SSF52768 48 246 1.98E-10 T 01-11-2018 IPR023696 Ureohydrolase domain superfamily CDA09_10830 74475212da7e6628adce69c9bac57e28 299 Gene3D G3DSA:3.40.800.10 49 247 7.3E-7 T 01-11-2018 CDA09_21230 f4dc7527238b9191713d1a6e34704536 247 TIGRFAM TIGR02001 gcw_chp: conserved hypothetical protein 1 247 4.4E-56 T 01-11-2018 IPR010239 Conserved hypothetical protein CHP02001 CDA09_21230 f4dc7527238b9191713d1a6e34704536 247 Pfam PF09694 Bacterial protein of unknown function (Gcw_chp) 26 247 2.2E-60 T 01-11-2018 IPR010239 Conserved hypothetical protein CHP02001 CDA09_09870 85d2594e8cded25b3afcd7dc7de86eca 145 SUPERFAMILY SSF52980 5 114 4.56E-23 T 01-11-2018 IPR011335 Restriction endonuclease type II-like Reactome: R-HSA-6783310 CDA09_09870 85d2594e8cded25b3afcd7dc7de86eca 145 Gene3D G3DSA:3.40.960.10 17 115 5.3E-32 T 01-11-2018 CDA09_09870 85d2594e8cded25b3afcd7dc7de86eca 145 Pfam PF04480 Protein of unknown function (DUF559) 10 113 3.6E-40 T 01-11-2018 IPR007569 Protein of unknown function DUF559 CDA09_07475 4ada25252b411f826288eb9d8639e90e 764 SUPERFAMILY SSF53474 60 384 5.35E-30 T 01-11-2018 IPR029058 Alpha/Beta hydrolase fold CDA09_07475 4ada25252b411f826288eb9d8639e90e 764 Gene3D G3DSA:3.40.50.1820 97 382 5.1E-8 T 01-11-2018 IPR029058 Alpha/Beta hydrolase fold CDA09_07475 4ada25252b411f826288eb9d8639e90e 764 Pfam PF11339 Protein of unknown function (DUF3141) 31 608 9.7E-279 T 01-11-2018 IPR024501 Protein of unknown function DUF3141 CDA09_19830 6f169f16127371721ce308e860aa588e 625 Hamap MF_01522 Low affinity potassium transport system protein kup [kup]. 8 625 31.681 T 01-11-2018 IPR023051 Potassium uptake protein, low affinity, Kup CDA09_19830 6f169f16127371721ce308e860aa588e 625 Pfam PF02705 K+ potassium transporter 17 548 1.1E-192 T 01-11-2018 IPR003855 Potassium transporter GO:0015079|GO:0016020|GO:0071805 CDA09_11670 eeef52f24c71f7d97508db9a34899053 64 Pfam PF09957 Bacterial antitoxin of type II TA system, VapB 1 47 3.2E-18 T 01-11-2018 IPR019239 Bacterial antitoxin of type II TA system, VapB CDA09_13055 08d8a74894131e6f64c1f1bfe5584441 214 Pfam PF13835 Domain of unknown function (DUF4194) 24 193 6.4E-44 T 01-11-2018 IPR025449 Protein of unknown function DUF4194 CDA09_22415 99dc3261cc938b1f77bb5de5c989914d 1051 Pfam PF06791 Prophage tail length tape measure protein 153 357 3.3E-57 T 01-11-2018 IPR009628 Bacteriophage lambda, GpH, tail tape measure, N-terminal CDA09_03565 6adc94c6ccb376f210cff24e6c45b550 474 Pfam PF14403 Circularly permuted ATP-grasp type 2 72 447 1.7E-164 T 01-11-2018 IPR025841 Circularly permuted ATP-grasp type 2 CDA09_03565 6adc94c6ccb376f210cff24e6c45b550 474 Gene3D G3DSA:3.40.50.11290 209 307 1.1E-42 T 01-11-2018 CDA09_03565 6adc94c6ccb376f210cff24e6c45b550 474 Gene3D G3DSA:3.30.1490.270 344 404 1.1E-25 T 01-11-2018 CDA09_03565 6adc94c6ccb376f210cff24e6c45b550 474 PIRSF PIRSF005522 1 474 8.5E-234 T 01-11-2018 IPR016450 Uncharacterised conserved protein UCP005522 CDA09_03565 6adc94c6ccb376f210cff24e6c45b550 474 SUPERFAMILY SSF56059 15 462 9.68E-65 T 01-11-2018 CDA09_08055 e94054b5cbe632675d860cc429e2aaca 180 Pfam PF01292 Prokaryotic cytochrome b561 6 176 6.2E-33 T 01-11-2018 IPR011577 Cytochrome b561, bacterial/Ni-hydrogenase GO:0009055|GO:0016021 CDA09_08055 e94054b5cbe632675d860cc429e2aaca 180 SUPERFAMILY SSF81342 2 176 2.43E-36 T 01-11-2018 IPR016174 Di-haem cytochrome, transmembrane GO:0016020|GO:0022904 Reactome: R-HSA-611105 CDA09_03410 0001bf273fca13ccd553584197be4774 159 SUPERFAMILY SSF89562 3 158 2.49E-50 T 01-11-2018 IPR036704 Ribonuclease E inhibitor RraA/RraA-like superfamily CDA09_03410 0001bf273fca13ccd553584197be4774 159 TIGRFAM TIGR01935 NOT-MenG: RraA family 5 154 7.1E-64 T 01-11-2018 IPR010203 Regulator of ribonuclease activity A GO:0008428|GO:0051252 CDA09_03410 0001bf273fca13ccd553584197be4774 159 Gene3D G3DSA:3.50.30.40 1 159 9.1E-66 T 01-11-2018 CDA09_03410 0001bf273fca13ccd553584197be4774 159 Pfam PF03737 Aldolase/RraA 5 153 1.3E-43 T 01-11-2018 IPR005493 Ribonuclease E inhibitor RraA/RraA-like protein CDA09_21060 0612c529f5ea9da7ef8c48ffd3939509 160 Pfam PF11848 Domain of unknown function (DUF3368) 112 157 2.7E-8 T 01-11-2018 IPR021799 Protein of unknown function DUF3368 CDA09_07280 541d68f631948f9918f7501cf663f168 535 Gene3D G3DSA:1.20.1250.20 306 533 1.2E-62 T 01-11-2018 CDA09_07280 541d68f631948f9918f7501cf663f168 535 SUPERFAMILY SSF103473 18 529 2.01E-27 T 01-11-2018 IPR036259 MFS transporter superfamily CDA09_07280 541d68f631948f9918f7501cf663f168 535 Gene3D G3DSA:1.20.1250.20 1 234 2.3E-73 T 01-11-2018 CDA09_17800 815cf405cedab6fa5be504117ec44cfc 81 Pfam PF11174 Protein of unknown function (DUF2970) 22 77 1.3E-19 T 01-11-2018 IPR021344 Protein of unknown function DUF2970 CDA09_19775 b110143e0d5789ffa4f7daef769e3a20 213 Pfam PF09335 SNARE associated Golgi protein 49 174 1.2E-18 T 01-11-2018 IPR032816 SNARE associated Golgi protein CDA09_03030 fb7d0588477f1289d9770468ef3fa898 117 Pfam PF12769 4TM region of pyridine nucleotide transhydrogenase, mitoch 7 91 5.1E-30 T 01-11-2018 IPR024605 NAD(P) transhydrogenase, alpha subunit, C-terminal KEGG: 00760+1.6.1.2|Reactome: R-HSA-71403 CDA09_18955 d408c20eea46148582f55fe382b6cbff 255 Pfam PF01618 MotA/TolQ/ExbB proton channel family 94 210 5.9E-37 T 01-11-2018 IPR002898 MotA/TolQ/ExbB proton channel CDA09_00310 0e781467180498c5581be6dcd6c47f5a 194 SUPERFAMILY SSF53448 6 189 2.25E-37 T 01-11-2018 IPR029044 Nucleotide-diphospho-sugar transferases CDA09_00310 0e781467180498c5581be6dcd6c47f5a 194 Pfam PF12804 MobA-like NTP transferase domain 9 159 8.0E-35 T 01-11-2018 IPR025877 MobA-like NTP transferase CDA09_00310 0e781467180498c5581be6dcd6c47f5a 194 TIGRFAM TIGR02665 molyb_mobA: molybdenum cofactor guanylyltransferase 7 189 2.4E-71 T 01-11-2018 IPR013482 Molybdenum cofactor guanylyltransferase GO:0003824|GO:0006777 KEGG: 00790+2.7.7.77|MetaCyc: PWY-5964|MetaCyc: PWY-7639 CDA09_00310 0e781467180498c5581be6dcd6c47f5a 194 Hamap MF_00316 Molybdenum cofactor guanylyltransferase [mobA]. 5 192 28.862 T 01-11-2018 IPR013482 Molybdenum cofactor guanylyltransferase GO:0003824|GO:0006777 KEGG: 00790+2.7.7.77|MetaCyc: PWY-5964|MetaCyc: PWY-7639 CDA09_00310 0e781467180498c5581be6dcd6c47f5a 194 Gene3D G3DSA:3.90.550.10 1 194 1.2E-55 T 01-11-2018 IPR029044 Nucleotide-diphospho-sugar transferases CDA09_10685 8716256b3c85380a8d5b701c59db5f35 88 Gene3D G3DSA:1.20.58.2000 1 77 1.2E-31 T 01-11-2018 CDA09_10685 8716256b3c85380a8d5b701c59db5f35 88 Pfam PF11431 Membrane transport protein MerF 23 64 2.0E-20 T 01-11-2018 IPR021091 Mercury ion transport, MerF CDA09_14650 484d3258b9bfc447f0e9280d667e802f 309 Pfam PF13557 Putative MetA-pathway of phenol degradation 60 305 2.7E-64 T 01-11-2018 IPR025737 MetA-pathway of phenol degradation, putative CDA09_10270 5db960df25fe07a93bd1931a6e4da44e 119 Gene3D G3DSA:3.10.20.560 18 118 2.9E-43 T 01-11-2018 CDA09_10270 5db960df25fe07a93bd1931a6e4da44e 119 Pfam PF04663 Phenol hydroxylase conserved region 14 79 1.7E-35 T 01-11-2018 IPR006756 Phenol hydroxylase KEGG: 00623+1.14.13.7|KEGG: 00627+1.14.13.7|MetaCyc: PWY-5418|MetaCyc: PWY-6197 CDA09_22620 ab6bf5c82138dddf84fc12afbdaf227b 222 Pfam PF04290 Tripartite ATP-independent periplasmic transporters, DctQ component 85 209 2.3E-17 T 01-11-2018 IPR007387 TRAP transporter, small membrane protein DctQ CDA09_10080 1a5e3b0471be9a21dc681b73bdc35ef9 261 Pfam PF11136 Protein of unknown function (DUF2889) 27 105 1.6E-6 T 01-11-2018 IPR021312 Protein of unknown function DUF2889 CDA09_10700 62c88cbc6fe15d4e97bce36c50a193b6 113 Pfam PF02635 DsrE/DsrF-like family 1 113 1.4E-22 T 01-11-2018 IPR003787 Sulphur relay, DsrE/F-like protein CDA09_10700 62c88cbc6fe15d4e97bce36c50a193b6 113 Gene3D G3DSA:3.40.1260.10 2 113 1.3E-30 T 01-11-2018 IPR027396 DsrEFH-like CDA09_10700 62c88cbc6fe15d4e97bce36c50a193b6 113 SUPERFAMILY SSF75169 1 113 1.28E-27 T 01-11-2018 IPR027396 DsrEFH-like CDA09_15895 7ce47165dde36a5b16af1814a4a36605 72 SUPERFAMILY SSF55174 3 68 2.88E-18 T 01-11-2018 CDA09_15895 7ce47165dde36a5b16af1814a4a36605 72 Pfam PF13275 S4 domain 6 67 2.9E-21 T 01-11-2018 CDA09_15895 7ce47165dde36a5b16af1814a4a36605 72 Gene3D G3DSA:3.10.290.10 1 70 1.4E-21 T 01-11-2018 IPR036986 RNA-binding S4 domain superfamily GO:0003723 CDA09_20135 e5f02aadd7ab3fc604c8ff09968996e7 264 Pfam PF09490 Probable cobalt transporter subunit (CbtA) 3 245 9.0E-61 T 01-11-2018 IPR012666 Cobalt transporter subunit CbtA, putative CDA09_08050 56752bbc3790dcd215d226c72b61b456 290 Gene3D G3DSA:3.40.50.720 3 272 1.2E-77 T 01-11-2018 CDA09_08050 56752bbc3790dcd215d226c72b61b456 290 Pfam PF13460 NAD(P)H-binding 6 187 3.6E-17 T 01-11-2018 IPR016040 NAD(P)-binding domain CDA09_08050 56752bbc3790dcd215d226c72b61b456 290 SUPERFAMILY SSF51735 2 276 6.33E-48 T 01-11-2018 IPR036291 NAD(P)-binding domain superfamily CDA09_08050 56752bbc3790dcd215d226c72b61b456 290 Gene3D G3DSA:3.90.25.10 142 273 1.2E-77 T 01-11-2018 CDA09_20610 b611c1823e016f93f70e9e14d280ae8d 183 PIRSF PIRSF030820 1 179 4.5E-52 T 01-11-2018 IPR008318 Uncharacterised conserved protein UCP030820 CDA09_20610 b611c1823e016f93f70e9e14d280ae8d 183 Pfam PF06073 Bacterial protein of unknown function (DUF934) 60 170 1.0E-40 T 01-11-2018 IPR008318 Uncharacterised conserved protein UCP030820 CDA09_02285 66553f86fff158e7968cf9540beb0351 70 Pfam PF06945 Protein of unknown function (DUF1289) 5 52 4.8E-21 T 01-11-2018 IPR010710 Protein of unknown function DUF1289 CDA09_02610 dcf5a2ca8f3b042fa7bb069258db8cd9 256 Pfam PF02654 Cobalamin-5-phosphate synthase 11 247 1.6E-52 T 01-11-2018 IPR003805 Adenosylcobinamide-GDP ribazoletransferase GO:0008818|GO:0009236|GO:0051073 KEGG: 00860+2.7.8.26|MetaCyc: PWY-5509|MetaCyc: PWY-6269|MetaCyc: PWY-7961|MetaCyc: PWY-7963|MetaCyc: PWY-7964|MetaCyc: PWY-7965|MetaCyc: PWY-7966|MetaCyc: PWY-7967|MetaCyc: PWY-7968|MetaCyc: PWY-7969|MetaCyc: PWY-7970|MetaCyc: PWY-7975 CDA09_02610 dcf5a2ca8f3b042fa7bb069258db8cd9 256 Hamap MF_00719 Adenosylcobinamide-GDP ribazoletransferase [cobS]. 1 256 50.6 T 01-11-2018 IPR003805 Adenosylcobinamide-GDP ribazoletransferase GO:0008818|GO:0009236|GO:0051073 KEGG: 00860+2.7.8.26|MetaCyc: PWY-5509|MetaCyc: PWY-6269|MetaCyc: PWY-7961|MetaCyc: PWY-7963|MetaCyc: PWY-7964|MetaCyc: PWY-7965|MetaCyc: PWY-7966|MetaCyc: PWY-7967|MetaCyc: PWY-7968|MetaCyc: PWY-7969|MetaCyc: PWY-7970|MetaCyc: PWY-7975 CDA09_02610 dcf5a2ca8f3b042fa7bb069258db8cd9 256 TIGRFAM TIGR00317 cobS: cobalamin 5'-phosphate synthase 6 249 3.1E-34 T 01-11-2018 IPR003805 Adenosylcobinamide-GDP ribazoletransferase GO:0008818|GO:0009236|GO:0051073 KEGG: 00860+2.7.8.26|MetaCyc: PWY-5509|MetaCyc: PWY-6269|MetaCyc: PWY-7961|MetaCyc: PWY-7963|MetaCyc: PWY-7964|MetaCyc: PWY-7965|MetaCyc: PWY-7966|MetaCyc: PWY-7967|MetaCyc: PWY-7968|MetaCyc: PWY-7969|MetaCyc: PWY-7970|MetaCyc: PWY-7975 CDA09_20005 251697de382673af3c6cd32ecbb36f98 149 Pfam PF07811 TadE-like protein 7 49 1.4E-13 T 01-11-2018 IPR012495 TadE-like CDA09_17670 b1a011ce258e90e6a458c4ae404789b3 275 Pfam PF01578 Cytochrome C assembly protein 64 270 2.5E-29 T 01-11-2018 IPR002541 Cytochrome c assembly protein GO:0017004|GO:0020037 CDA09_21650 4e248ce56a60d8bbc356760a97750dcf 150 TIGRFAM TIGR03757 conj_TIGR03757: integrating conjugative element protein, PFL_4709 family 37 146 2.2E-42 T 01-11-2018 IPR011090 Integrating conjugative element protein, PFL4709 CDA09_21650 4e248ce56a60d8bbc356760a97750dcf 150 Pfam PF07511 Protein of unknown function (DUF1525) 37 147 1.0E-40 T 01-11-2018 IPR011090 Integrating conjugative element protein, PFL4709 CDA09_19040 6f34ea655cc448191b6e0f5503840d2f 153 Pfam PF04214 Protein of unknown function, DUF 59 127 1.0E-32 T 01-11-2018 IPR007332 Protein of unknown function DUF411 CDA09_00055 9c61370fc647502d95a89df09fcbd1d0 81 Pfam PF02604 Antitoxin Phd_YefM, type II toxin-antitoxin system 5 60 2.1E-7 T 01-11-2018 IPR006442 Type II toxin-antitoxin system, antitoxin Phd/YefM CDA09_00055 9c61370fc647502d95a89df09fcbd1d0 81 SUPERFAMILY SSF143120 5 44 5.62E-7 T 01-11-2018 IPR036165 YefM-like superfamily CDA09_00055 9c61370fc647502d95a89df09fcbd1d0 81 TIGRFAM TIGR01552 phd_fam: prevent-host-death family protein 6 45 4.7E-8 T 01-11-2018 CDA09_03110 4c6a6b644466577243d3fa0eea4bf955 197 Pfam PF03264 NapC/NirT cytochrome c family, N-terminal region 18 184 2.3E-63 T 01-11-2018 IPR005126 NapC/NirT cytochrome c, N-terminal CDA09_03110 4c6a6b644466577243d3fa0eea4bf955 197 SUPERFAMILY SSF48695 27 183 2.49E-42 T 01-11-2018 IPR036280 Multiheme cytochrome superfamily CDA09_03110 4c6a6b644466577243d3fa0eea4bf955 197 Gene3D G3DSA:1.10.3820.10 11 194 5.0E-34 T 01-11-2018 IPR038266 NapC/NirT cytochrome c superfamily CDA09_03110 4c6a6b644466577243d3fa0eea4bf955 197 PIRSF PIRSF000013 1 196 1.8E-68 T 01-11-2018 IPR024717 Denitrification system component NapC/NirT/NrfH GO:0016021|GO:0019333|GO:0020037 CDA09_06335 aab5d98d57612160e7dc33a4d4bdc65a 202 Pfam PF07452 CHRD domain 37 177 1.9E-7 T 01-11-2018 IPR010895 CHRD CDA09_15385 76460ecf56e0fd7fe08ede54dedfae4f 304 Pfam PF09699 Doubled CXXCH motif (Paired_CXXCH_1) 266 303 1.1E-7 T 01-11-2018 IPR010177 Doubled CXXCH motif CDA09_15385 76460ecf56e0fd7fe08ede54dedfae4f 304 SUPERFAMILY SSF48695 54 303 2.23E-14 T 01-11-2018 IPR036280 Multiheme cytochrome superfamily CDA09_17985 cab44ccae74b0a427dd8c3a60338adb7 231 ProSitePatterns PS01086 Ribulose-phosphate 3-epimerase family signature 2. 133 155 - T 01-11-2018 IPR000056 Ribulose-phosphate 3-epimerase-like GO:0005975|GO:0016857 KEGG: 00030+5.1.3.1|KEGG: 00040+5.1.3.1|KEGG: 00710+5.1.3.1|MetaCyc: PWY-1861|MetaCyc: PWY-5723|Reactome: R-HSA-71336 CDA09_17985 cab44ccae74b0a427dd8c3a60338adb7 231 TIGRFAM TIGR01163 rpe: ribulose-phosphate 3-epimerase 4 207 8.0E-92 T 01-11-2018 IPR000056 Ribulose-phosphate 3-epimerase-like GO:0005975|GO:0016857 KEGG: 00030+5.1.3.1|KEGG: 00040+5.1.3.1|KEGG: 00710+5.1.3.1|MetaCyc: PWY-1861|MetaCyc: PWY-5723|Reactome: R-HSA-71336 CDA09_17985 cab44ccae74b0a427dd8c3a60338adb7 231 SUPERFAMILY SSF51366 1 207 1.01E-70 T 01-11-2018 IPR011060 Ribulose-phosphate binding barrel GO:0003824 CDA09_17985 cab44ccae74b0a427dd8c3a60338adb7 231 Pfam PF00834 Ribulose-phosphate 3 epimerase family 4 204 4.0E-89 T 01-11-2018 IPR000056 Ribulose-phosphate 3-epimerase-like GO:0005975|GO:0016857 KEGG: 00030+5.1.3.1|KEGG: 00040+5.1.3.1|KEGG: 00710+5.1.3.1|MetaCyc: PWY-1861|MetaCyc: PWY-5723|Reactome: R-HSA-71336 CDA09_17985 cab44ccae74b0a427dd8c3a60338adb7 231 Gene3D G3DSA:3.20.20.70 1 229 4.9E-78 T 01-11-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 CDA09_17985 cab44ccae74b0a427dd8c3a60338adb7 231 PIRSF PIRSF001461 1 231 3.2E-98 T 01-11-2018 IPR026019 Ribulose-phosphate 3-epimerase GO:0004750|GO:0006098 KEGG: 00030+5.1.3.1|KEGG: 00040+5.1.3.1|KEGG: 00710+5.1.3.1|MetaCyc: PWY-1861|MetaCyc: PWY-5723|Reactome: R-HSA-71336 CDA09_17985 cab44ccae74b0a427dd8c3a60338adb7 231 ProSitePatterns PS01085 Ribulose-phosphate 3-epimerase family signature 1. 31 45 - T 01-11-2018 IPR000056 Ribulose-phosphate 3-epimerase-like GO:0005975|GO:0016857 KEGG: 00030+5.1.3.1|KEGG: 00040+5.1.3.1|KEGG: 00710+5.1.3.1|MetaCyc: PWY-1861|MetaCyc: PWY-5723|Reactome: R-HSA-71336 CDA09_21705 c00494357c8415e0c3a3a5089dc746e0 121 TIGRFAM TIGR01690 ICE_RAQPRD: integrative conjugative element protein, RAQPRD family 19 112 3.9E-34 T 01-11-2018 IPR019110 Uncharacterised protein family, RAQPRD CDA09_21705 c00494357c8415e0c3a3a5089dc746e0 121 Pfam PF09686 Plasmid protein of unknown function (Plasmid_RAQPRD) 36 110 1.9E-28 T 01-11-2018 IPR019110 Uncharacterised protein family, RAQPRD CDA09_17875 a10527b81517cabe3e48cfe7ba473d48 206 Pfam PF01810 LysE type translocator 23 198 2.1E-15 T 01-11-2018 IPR001123 Amino acid exporter protein, LeuE-type GO:0006865|GO:0016020 CDA09_01020 bcac7565be4f1f8932f9293d4bd4680a 655 Gene3D G3DSA:2.130.10.10 315 527 8.7E-14 T 01-11-2018 IPR015943 WD40/YVTN repeat-like-containing domain superfamily GO:0005515 CDA09_01020 bcac7565be4f1f8932f9293d4bd4680a 655 Gene3D G3DSA:2.130.10.10 130 234 3.1E-14 T 01-11-2018 IPR015943 WD40/YVTN repeat-like-containing domain superfamily GO:0005515 CDA09_01020 bcac7565be4f1f8932f9293d4bd4680a 655 Pfam PF02239 Cytochrome D1 heme domain 238 342 1.7E-10 T 01-11-2018 CDA09_01020 bcac7565be4f1f8932f9293d4bd4680a 655 Gene3D G3DSA:2.130.10.10 235 314 1.5E-17 T 01-11-2018 IPR015943 WD40/YVTN repeat-like-containing domain superfamily GO:0005515 CDA09_01020 bcac7565be4f1f8932f9293d4bd4680a 655 SUPERFAMILY SSF51004 131 459 6.54E-46 T 01-11-2018 IPR011048 Cytochrome cd1-nitrite reductase-like, haem d1 domain superfamily CDA09_02770 33e9d16b2da7b93400aecdb2269254a5 402 Pfam PF12704 MacB-like periplasmic core domain 21 244 2.0E-32 T 01-11-2018 IPR025857 MacB-like periplasmic core domain CDA09_02770 33e9d16b2da7b93400aecdb2269254a5 402 Pfam PF02687 FtsX-like permease family 307 395 1.3E-8 T 01-11-2018 IPR003838 ABC transporter permease protein domain GO:0016020 CDA09_01420 202c6e52291478f8b69ce4f1de1715bc 318 Pfam PF05140 ResB-like family 59 171 2.8E-6 T 01-11-2018 IPR007816 ResB-like domain CDA09_22785 ab2ff99860e44d2be577655aa68d5d85 451 ProSitePatterns PS01276 Peptidase family U32 signature. 167 185 - T 01-11-2018 IPR001539 Peptidase U32 GO:0006508|GO:0008233 CDA09_22785 ab2ff99860e44d2be577655aa68d5d85 451 Pfam PF01136 Peptidase family U32 85 349 1.7E-96 T 01-11-2018 IPR001539 Peptidase U32 GO:0006508|GO:0008233 CDA09_22785 ab2ff99860e44d2be577655aa68d5d85 451 Gene3D G3DSA:2.40.30.10 365 439 8.5E-7 T 01-11-2018 CDA09_22785 ab2ff99860e44d2be577655aa68d5d85 451 Pfam PF16325 Peptidase family U32 C-terminal domain 368 436 2.2E-12 T 01-11-2018 IPR032525 Peptidase family U32, C-terminal CDA09_01285 49a4bd0de02b02a6d890aef76cfc67a6 212 Pfam PF03264 NapC/NirT cytochrome c family, N-terminal region 21 185 1.1E-73 T 01-11-2018 IPR005126 NapC/NirT cytochrome c, N-terminal CDA09_01285 49a4bd0de02b02a6d890aef76cfc67a6 212 Gene3D G3DSA:1.10.3820.10 12 193 1.5E-37 T 01-11-2018 IPR038266 NapC/NirT cytochrome c superfamily CDA09_01285 49a4bd0de02b02a6d890aef76cfc67a6 212 SUPERFAMILY SSF48695 26 187 3.17E-54 T 01-11-2018 IPR036280 Multiheme cytochrome superfamily CDA09_01285 49a4bd0de02b02a6d890aef76cfc67a6 212 PIRSF PIRSF000013 4 196 1.8E-88 T 01-11-2018 IPR024717 Denitrification system component NapC/NirT/NrfH GO:0016021|GO:0019333|GO:0020037 CDA09_08710 e52ede526dcb4d912275a5ee224dd1fe 180 Pfam PF01863 Protein of unknown function DUF45 109 158 3.2E-11 T 01-11-2018 IPR002725 Protein of unknown function DUF45 CDA09_08710 e52ede526dcb4d912275a5ee224dd1fe 180 Gene3D G3DSA:3.30.2010.10 73 163 6.0E-6 T 01-11-2018 CDA09_16820 44f05e5a39efbfa8cfa8d66324d6fdb3 395 Pfam PF05940 NnrS protein 2 389 3.3E-62 T 01-11-2018 IPR010266 NnrS CDA09_01825 461cf2c5d2173ce863d5260e050de51b 182 Pfam PF11161 Protein of unknown function (DUF2946) 8 181 1.7E-47 T 01-11-2018 IPR021332 Protein of unknown function DUF2944 CDA09_08735 cac80a3316243a8c793d1fcb798529bb 24 Pfam PF08042 PqqA family 2 20 6.1E-10 T 01-11-2018 IPR011725 Coenzyme PQQ biosynthesis protein A GO:0018189 CDA09_08735 cac80a3316243a8c793d1fcb798529bb 24 TIGRFAM TIGR02107 PQQ_syn_pqqA: coenzyme PQQ precursor peptide PqqA 3 23 5.3E-8 T 01-11-2018 IPR011725 Coenzyme PQQ biosynthesis protein A GO:0018189 CDA09_08885 fd08efb1c5c4156783fbba0e1e2287b9 105 Pfam PF03626 Prokaryotic Cytochrome C oxidase subunit IV 26 95 1.7E-11 T 01-11-2018 IPR005171 Cytochrome C oxidase subunit IV, prokaryotes GO:0016021 CDA09_03250 3404d5cf05cf8daa81e7ff3c7651c91d 202 SUPERFAMILY SSF48695 26 201 1.65E-10 T 01-11-2018 IPR036280 Multiheme cytochrome superfamily CDA09_03250 3404d5cf05cf8daa81e7ff3c7651c91d 202 Pfam PF09699 Doubled CXXCH motif (Paired_CXXCH_1) 164 202 1.6E-4 T 01-11-2018 IPR010177 Doubled CXXCH motif CDA09_00705 4383577b789c20997177533587ffdd79 401 Gene3D G3DSA:2.40.160.60 34 313 1.5E-32 T 01-11-2018 CDA09_00705 4383577b789c20997177533587ffdd79 401 Pfam PF03349 Outer membrane protein transport protein (OMPP1/FadL/TodX) 31 186 2.3E-16 T 01-11-2018 IPR005017 Outer membrane protein transport protein (OMPP1/FadL/TodX) CDA09_00705 4383577b789c20997177533587ffdd79 401 SUPERFAMILY SSF56935 38 401 3.66E-31 T 01-11-2018 CDA09_13935 dfbbb38ade45e412a63b1971c71305ad 305 Gene3D G3DSA:3.20.20.410 1 304 2.3E-84 T 01-11-2018 IPR036520 UPF0759 superfamily CDA09_13935 dfbbb38ade45e412a63b1971c71305ad 305 SUPERFAMILY SSF117396 3 297 4.05E-74 T 01-11-2018 IPR036520 UPF0759 superfamily CDA09_13935 dfbbb38ade45e412a63b1971c71305ad 305 Pfam PF01904 Protein of unknown function DUF72 24 296 6.1E-60 T 01-11-2018 IPR002763 Protein of unknown function DUF72 CDA09_15815 49e2a9df7652b04eabbae88e1240e099 125 SUPERFAMILY SSF64076 1 122 7.59E-36 T 01-11-2018 IPR036748 MTH938-like superfamily CDA09_15815 49e2a9df7652b04eabbae88e1240e099 125 Gene3D G3DSA:3.40.1230.10 1 124 1.0E-37 T 01-11-2018 IPR036748 MTH938-like superfamily CDA09_15815 49e2a9df7652b04eabbae88e1240e099 125 Pfam PF04430 Protein of unknown function (DUF498/DUF598) 14 121 9.2E-30 T 01-11-2018 IPR007523 NDUFAF3/Mth938 domain-containing protein CDA09_15910 48475e35d564abf6ffc147d7751f189d 158 Pfam PF03692 Putative zinc- or iron-chelating domain 50 131 6.4E-9 T 01-11-2018 IPR005358 Putative zinc- or iron-chelating domain containing protein CDA09_11325 195ce8c5bdc9228a745967c9c1d3c394 305 Gene3D G3DSA:1.10.4200.10 30 290 1.8E-58 T 01-11-2018 CDA09_11325 195ce8c5bdc9228a745967c9c1d3c394 305 Pfam PF01874 ATP:dephospho-CoA triphosphoribosyl transferase 14 285 1.9E-67 T 01-11-2018 IPR002736 Triphosphoribosyl-dephospho-CoA protein GO:0005524|GO:0016310|GO:0046917 MetaCyc: PWY-5796 CDA09_09895 a0a4943a6118c5e4a833ac184a3b1888 413 Gene3D G3DSA:3.30.1540.10 248 342 3.4E-94 T 01-11-2018 CDA09_09895 a0a4943a6118c5e4a833ac184a3b1888 413 Pfam PF02515 CoA-transferase family III 17 387 2.3E-76 T 01-11-2018 IPR003673 CoA-transferase family III GO:0003824 CDA09_09895 a0a4943a6118c5e4a833ac184a3b1888 413 SUPERFAMILY SSF89796 9 411 2.49E-87 T 01-11-2018 IPR023606 CoA-transferase family III domain superfamily CDA09_09895 a0a4943a6118c5e4a833ac184a3b1888 413 Gene3D G3DSA:3.40.50.10540 10 406 3.4E-94 T 01-11-2018 IPR023606 CoA-transferase family III domain superfamily CDA09_13690 e807422d265a2305655448b6e110b4ef 74 SUPERFAMILY SSF54862 9 69 2.65E-11 T 01-11-2018 CDA09_13690 e807422d265a2305655448b6e110b4ef 74 PRINTS PR00352 3Fe-4S ferredoxin signature 13 24 3.8E-6 T 01-11-2018 IPR001080 3Fe-4S ferredoxin GO:0005506|GO:0009055 CDA09_13690 e807422d265a2305655448b6e110b4ef 74 PRINTS PR00352 3Fe-4S ferredoxin signature 24 34 3.8E-6 T 01-11-2018 IPR001080 3Fe-4S ferredoxin GO:0005506|GO:0009055 CDA09_13690 e807422d265a2305655448b6e110b4ef 74 PRINTS PR00352 3Fe-4S ferredoxin signature 55 67 3.8E-6 T 01-11-2018 IPR001080 3Fe-4S ferredoxin GO:0005506|GO:0009055 CDA09_13690 e807422d265a2305655448b6e110b4ef 74 Pfam PF13459 4Fe-4S single cluster domain 11 69 3.7E-15 T 01-11-2018 CDA09_13690 e807422d265a2305655448b6e110b4ef 74 Gene3D G3DSA:3.30.70.20 6 71 8.2E-20 T 01-11-2018 CDA09_14210 1cbf2d49a5376725272b13ac1cad7657 218 Pfam PF12101 Protein of unknown function (DUF3577) 62 200 1.6E-44 T 01-11-2018 IPR021960 Protein of unknown function DUF3577 CDA09_00075 0b47c34c35b1a2ae174334895bab00ad 168 Gene3D G3DSA:3.30.420.10 1 167 1.2E-20 T 01-11-2018 IPR036397 Ribonuclease H superfamily GO:0003676 CDA09_00075 0b47c34c35b1a2ae174334895bab00ad 168 Pfam PF16473 3' exoribonuclease, RNase T-like 3 154 5.1E-8 T 01-11-2018 IPR033390 3'-5' exoribonuclease Rv2179c-like domain CDA09_03935 766162e2d4d42cacd16733a076445a33 155 Pfam PF13511 Domain of unknown function (DUF4124) 7 66 4.2E-13 T 01-11-2018 IPR025392 Domain of unknown function DUF4124 CDA09_03935 766162e2d4d42cacd16733a076445a33 155 SUPERFAMILY SSF57997 87 150 2.03E-7 T 01-11-2018 CDA09_19090 7b416d49dd60e5490f9125caaa24e3fe 160 SUPERFAMILY SSF81593 44 127 2.04E-12 T 01-11-2018 CDA09_18995 541aefe09f39146dd0e8b2d8c89f8b25 272 Pfam PF03239 Iron permease FTR1 family 4 257 1.6E-29 T 01-11-2018 IPR004923 Iron permease FTR1/Fip1/EfeU GO:0005381|GO:0016020|GO:0033573|GO:0034755 CDA09_16065 9b48f8c3fd6e1fd03a9fe2266a93885a 323 SUPERFAMILY SSF110296 53 278 5.36E-41 T 01-11-2018 CDA09_16065 9b48f8c3fd6e1fd03a9fe2266a93885a 323 Gene3D G3DSA:2.130.10.10 42 277 1.3E-22 T 01-11-2018 IPR015943 WD40/YVTN repeat-like-containing domain superfamily GO:0005515 CDA09_16065 9b48f8c3fd6e1fd03a9fe2266a93885a 323 Pfam PF14870 Photosynthesis system II assembly factor YCF48 121 209 1.4E-9 T 01-11-2018 IPR028203 Photosynthesis system II assembly factor Ycf48/Hcf136-like domain CDA09_03635 9abd14233bbbe033a1b3aa78130f9648 492 Pfam PF05943 Type VI secretion protein, EvpB/VC_A0108, tail sheath 65 487 3.6E-189 T 01-11-2018 IPR010269 Type VI secretion protein, EvpB/VC_A0108, tail sheath CDA09_03635 9abd14233bbbe033a1b3aa78130f9648 492 TIGRFAM TIGR03355 VI_chp_2: type VI secretion protein, EvpB/VC_A0108 family 17 487 2.0E-212 T 01-11-2018 IPR010269 Type VI secretion protein, EvpB/VC_A0108, tail sheath CDA09_21305 98da20b3baa87f30d7a0ab20bb991f5e 214 Pfam PF13511 Domain of unknown function (DUF4124) 11 57 4.9E-7 T 01-11-2018 IPR025392 Domain of unknown function DUF4124 CDA09_20550 94ffdc014b0410a31c49c51a0da6d559 173 SUPERFAMILY SSF81324 37 135 1.44E-13 T 01-11-2018 CDA09_20550 94ffdc014b0410a31c49c51a0da6d559 173 Pfam PF07885 Ion channel 66 132 2.0E-10 T 01-11-2018 IPR013099 Potassium channel domain CDA09_20550 94ffdc014b0410a31c49c51a0da6d559 173 Gene3D G3DSA:1.10.287.70 35 138 1.3E-10 T 01-11-2018 CDA09_12785 a8ce75de2cf9f0f06fe031f77baf886e 317 Pfam PF02470 MlaD protein 44 112 2.7E-13 T 01-11-2018 IPR003399 Mce/MlaD CDA09_06415 f341d112b5c5942ab662d0bcc7b8de0f 484 Pfam PF00361 Proton-conducting membrane transporter 125 416 1.2E-51 T 01-11-2018 IPR001750 NADH:quinone oxidoreductase/Mrp antiporter, membrane subunit Reactome: R-HSA-611105|Reactome: R-HSA-6799198 CDA09_06415 f341d112b5c5942ab662d0bcc7b8de0f 484 PRINTS PR01437 NADH-ubiquinone oxidoreductase subunit 4 signature 328 347 3.6E-12 T 01-11-2018 IPR003918 NADH:ubiquinone oxidoreductase GO:0008137|GO:0042773|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 CDA09_06415 f341d112b5c5942ab662d0bcc7b8de0f 484 PRINTS PR01437 NADH-ubiquinone oxidoreductase subunit 4 signature 130 149 3.6E-12 T 01-11-2018 IPR003918 NADH:ubiquinone oxidoreductase GO:0008137|GO:0042773|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 CDA09_06415 f341d112b5c5942ab662d0bcc7b8de0f 484 PRINTS PR01437 NADH-ubiquinone oxidoreductase subunit 4 signature 239 263 3.6E-12 T 01-11-2018 IPR003918 NADH:ubiquinone oxidoreductase GO:0008137|GO:0042773|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 CDA09_06415 f341d112b5c5942ab662d0bcc7b8de0f 484 PRINTS PR01437 NADH-ubiquinone oxidoreductase subunit 4 signature 380 406 3.6E-12 T 01-11-2018 IPR003918 NADH:ubiquinone oxidoreductase GO:0008137|GO:0042773|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 CDA09_13015 64e2ce38a11b76321403ada3af3933c4 213 Gene3D G3DSA:3.30.1330.60 43 205 2.4E-36 T 01-11-2018 IPR036737 OmpA-like domain superfamily CDA09_13015 64e2ce38a11b76321403ada3af3933c4 213 Pfam PF00691 OmpA family 91 195 7.4E-18 T 01-11-2018 IPR006665 OmpA-like domain CDA09_13015 64e2ce38a11b76321403ada3af3933c4 213 SUPERFAMILY SSF103088 80 199 9.81E-28 T 01-11-2018 IPR036737 OmpA-like domain superfamily CDA09_14865 dfcfbc383135887af32d258e22d6d7f8 315 Gene3D G3DSA:3.40.50.10610 49 147 4.6E-35 T 01-11-2018 CDA09_14865 dfcfbc383135887af32d258e22d6d7f8 315 Gene3D G3DSA:3.40.50.10610 148 290 5.4E-53 T 01-11-2018 CDA09_14865 dfcfbc383135887af32d258e22d6d7f8 315 Pfam PF03783 Curli production assembly/transport component CsgG 62 270 1.2E-72 T 01-11-2018 IPR005534 Curli production assembly/transport component CsgG GO:0030288 CDA09_04365 0615b8d1fd103a59b8135b8bc66fe6a1 184 Pfam PF11136 Protein of unknown function (DUF2889) 14 137 2.3E-42 T 01-11-2018 IPR021312 Protein of unknown function DUF2889 CDA09_09845 78851b75e45ed71fd4f6042c75ffff18 440 Pfam PF13751 Transposase DDE domain 356 434 3.4E-17 T 01-11-2018 IPR025668 Transposase DDE domain CDA09_09845 78851b75e45ed71fd4f6042c75ffff18 440 Pfam PF05598 Transposase domain (DUF772) 56 123 4.6E-13 T 01-11-2018 IPR008490 Transposase InsH, N-terminal CDA09_13760 ce1158add68b4d29639d1d27de084b3c 388 Pfam PF04986 Putative transposase 144 332 6.1E-63 T 01-11-2018 IPR007069 Transposase, IS801/IS1294 GO:0003677|GO:0004803|GO:0006313 CDA09_13760 ce1158add68b4d29639d1d27de084b3c 388 Pfam PF14319 Transposase zinc-binding domain 10 118 4.5E-41 T 01-11-2018 IPR026889 Transposase zinc-binding domain CDA09_08315 f62d00ff1b84230869331a2ba0a5700a 72 SUPERFAMILY SSF54862 5 67 5.28E-16 T 01-11-2018 CDA09_08315 f62d00ff1b84230869331a2ba0a5700a 72 Pfam PF00037 4Fe-4S binding domain 4 25 1.7E-6 T 01-11-2018 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain CDA09_08315 f62d00ff1b84230869331a2ba0a5700a 72 Gene3D G3DSA:3.30.70.20 3 72 1.5E-21 T 01-11-2018 CDA09_08315 f62d00ff1b84230869331a2ba0a5700a 72 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 10 21 - T 01-11-2018 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site CDA09_20210 c20bd742779c9e532d28666e2e20ea39 208 Pfam PF01810 LysE type translocator 18 205 8.4E-36 T 01-11-2018 IPR001123 Amino acid exporter protein, LeuE-type GO:0006865|GO:0016020 CDA09_20210 c20bd742779c9e532d28666e2e20ea39 208 PIRSF PIRSF006324 1 208 4.0E-55 T 01-11-2018 IPR001123 Amino acid exporter protein, LeuE-type GO:0006865|GO:0016020 CDA09_15565 4962b366257ef48d117b1029b468902d 309 Pfam PF13557 Putative MetA-pathway of phenol degradation 57 305 4.2E-69 T 01-11-2018 IPR025737 MetA-pathway of phenol degradation, putative CDA09_02220 f07f447ddd8995a32bd8e83de2344ea6 111 SUPERFAMILY SSF55008 32 82 4.71E-5 T 01-11-2018 IPR036163 Heavy metal-associated domain superfamily GO:0030001|GO:0046872 CDA09_02220 f07f447ddd8995a32bd8e83de2344ea6 111 Pfam PF00403 Heavy-metal-associated domain 43 74 1.9E-5 T 01-11-2018 IPR006121 Heavy metal-associated domain, HMA GO:0030001|GO:0046872 CDA09_21195 35bc90e207f8f9e0e4dd6be8a7c499b2 366 Pfam PF02653 Branched-chain amino acid transport system / permease component 44 338 1.3E-44 T 01-11-2018 IPR001851 ABC transporter, permease GO:0016020|GO:0022857|GO:0055085 CDA09_04900 73d80b257d265a3429ad1305527115f5 500 Pfam PF00665 Integrase core domain 129 253 9.4E-15 T 01-11-2018 IPR001584 Integrase, catalytic core GO:0015074 CDA09_04900 73d80b257d265a3429ad1305527115f5 500 Pfam PF13384 Homeodomain-like domain 14 47 5.5E-6 T 01-11-2018 CDA09_14840 8861bf72066a4c070fc2888304571625 371 Pfam PF07012 Curlin associated repeat 300 333 9.5E-5 T 01-11-2018 IPR009742 Curlin associated GO:0007155|GO:0009289 CDA09_19295 7148742eb18a7dc2d7a38eb5c44e6e0e 273 Gene3D G3DSA:3.40.50.720 9 265 2.4E-95 T 01-11-2018 CDA09_19295 7148742eb18a7dc2d7a38eb5c44e6e0e 273 SUPERFAMILY SSF69572 13 258 2.35E-66 T 01-11-2018 IPR035985 Ubiquitin-activating enzyme GO:0008641 CDA09_19295 7148742eb18a7dc2d7a38eb5c44e6e0e 273 Pfam PF00899 ThiF family 27 260 1.9E-39 T 01-11-2018 IPR000594 THIF-type NAD/FAD binding fold GO:0008641 CDA09_22575 dbf48932cb8dac5ecf771eea9c5948e4 220 Pfam PF13511 Domain of unknown function (DUF4124) 43 89 1.7E-5 T 01-11-2018 IPR025392 Domain of unknown function DUF4124 CDA09_01700 4b7c4f9ae0e8d12267324477afd8be6a 95 Gene3D G3DSA:3.10.20.520 1 65 3.0E-32 T 01-11-2018 IPR038693 Phenylacetyl-CoA epoxidase, subunit B CDA09_01700 4b7c4f9ae0e8d12267324477afd8be6a 95 TIGRFAM TIGR02157 PA_CoA_Oxy2: phenylacetate-CoA oxygenase, PaaH subunit 6 95 1.1E-49 T 01-11-2018 IPR009359 Phenylacetic acid degradation B CDA09_01700 4b7c4f9ae0e8d12267324477afd8be6a 95 Pfam PF06243 Phenylacetic acid degradation B 5 92 1.5E-40 T 01-11-2018 IPR009359 Phenylacetic acid degradation B CDA09_01700 4b7c4f9ae0e8d12267324477afd8be6a 95 PIRSF PIRSF030200 1 95 1.0E-45 T 01-11-2018 IPR009359 Phenylacetic acid degradation B CDA09_00720 268e930b45f0c6bf898b8d5ea6f47e17 454 SUPERFAMILY SSF140931 201 367 1.31E-20 T 01-11-2018 IPR036597 Fido-like domain superfamily CDA09_00720 268e930b45f0c6bf898b8d5ea6f47e17 454 Pfam PF02661 Fic/DOC family 225 315 1.2E-12 T 01-11-2018 IPR003812 Fido domain CDA09_00720 268e930b45f0c6bf898b8d5ea6f47e17 454 Gene3D G3DSA:1.10.3290.10 140 373 2.0E-33 T 01-11-2018 IPR036597 Fido-like domain superfamily CDA09_21675 5af36e9d88946f6aa370018366f313c1 485 TIGRFAM TIGR03752 conj_TIGR03752: integrating conjugative element protein, PFL_4705 family 2 475 4.2E-188 T 01-11-2018 IPR021207 Integrating conjugative element protein, PFL4705 CDA09_14125 52b0997387d1f9d43c276cba446c7b6d 299 Gene3D G3DSA:1.10.10.10 1 86 1.6E-5 T 01-11-2018 IPR036388 Winged helix-like DNA-binding domain superfamily CDA09_15710 59d6321f6f01e5edfdb632793285bdfa 196 Pfam PF13668 Ferritin-like domain 56 186 1.4E-36 T 01-11-2018 CDA09_15710 59d6321f6f01e5edfdb632793285bdfa 196 SUPERFAMILY SSF47240 53 195 5.08E-41 T 01-11-2018 IPR009078 Ferritin-like superfamily CDA09_15710 59d6321f6f01e5edfdb632793285bdfa 196 Gene3D G3DSA:1.20.1260.10 51 187 1.7E-13 T 01-11-2018 IPR012347 Ferritin-like CDA09_03285 2d00b22957bee83c1c2277d717f8feed 269 Hamap MF_01527_B GTP cyclohydrolase FolE2 [folE2]. 9 264 38.419 T 01-11-2018 IPR022838 GTP cyclohydrolase FolE2 GO:0003934|GO:0035998 KEGG: 00790+3.5.4.16|MetaCyc: PWY-5663|MetaCyc: PWY-5664|MetaCyc: PWY-6147|MetaCyc: PWY-6703|MetaCyc: PWY-6983|MetaCyc: PWY-7442|MetaCyc: PWY-7852 CDA09_03285 2d00b22957bee83c1c2277d717f8feed 269 Gene3D G3DSA:3.10.270.10 20 268 1.3E-101 T 01-11-2018 CDA09_03285 2d00b22957bee83c1c2277d717f8feed 269 Pfam PF02649 Type I GTP cyclohydrolase folE2 9 259 2.7E-98 T 01-11-2018 IPR003801 GTP cyclohydrolase FolE2/MptA GO:0003933 KEGG: 00790+3.5.4.16|MetaCyc: PWY-5663|MetaCyc: PWY-5664|MetaCyc: PWY-6147|MetaCyc: PWY-6703|MetaCyc: PWY-6983|MetaCyc: PWY-7442|MetaCyc: PWY-7852 CDA09_01950 37d3faca99d43019d2b6781e33112edd 105 Pfam PF03626 Prokaryotic Cytochrome C oxidase subunit IV 16 85 1.1E-13 T 01-11-2018 IPR005171 Cytochrome C oxidase subunit IV, prokaryotes GO:0016021 CDA09_07870 f4d38435b6efde069835c3de53690b91 230 TIGRFAM TIGR01726 HEQRo_perm_3TM: amino ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family 9 116 8.4E-16 T 01-11-2018 IPR010065 Amino acid ABC transporter, permease protein, 3-TM domain GO:0016021|GO:0022857|GO:0043190|GO:0071705 CDA09_07870 f4d38435b6efde069835c3de53690b91 230 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 36 209 7.4E-17 T 01-11-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 CDA09_07870 f4d38435b6efde069835c3de53690b91 230 SUPERFAMILY SSF161098 9 207 1.44E-39 T 01-11-2018 IPR035906 MetI-like superfamily CDA09_07870 f4d38435b6efde069835c3de53690b91 230 Gene3D G3DSA:1.10.3720.10 1 224 2.5E-48 T 01-11-2018 IPR035906 MetI-like superfamily CDA09_22025 d8ef66e73accf88dcece57a453f2767e 41 Pfam PF13751 Transposase DDE domain 3 34 4.3E-7 T 01-11-2018 IPR025668 Transposase DDE domain CDA09_09400 57bf9625ad656fcedc2087c58d0b629f 139 Pfam PF01575 MaoC like domain 20 121 4.7E-12 T 01-11-2018 IPR002539 MaoC-like dehydratase domain CDA09_09400 57bf9625ad656fcedc2087c58d0b629f 139 Gene3D G3DSA:3.10.129.10 12 138 5.3E-30 T 01-11-2018 CDA09_09400 57bf9625ad656fcedc2087c58d0b629f 139 SUPERFAMILY SSF54637 6 137 2.24E-23 T 01-11-2018 IPR029069 HotDog domain superfamily CDA09_16095 08393271a0461d551ee479118c785c0b 137 Gene3D G3DSA:3.30.450.150 1 132 4.4E-40 T 01-11-2018 IPR038084 GlcG-like domain superfamily CDA09_16095 08393271a0461d551ee479118c785c0b 137 SUPERFAMILY SSF143744 2 131 4.18E-36 T 01-11-2018 IPR038084 GlcG-like domain superfamily CDA09_16095 08393271a0461d551ee479118c785c0b 137 Pfam PF03928 Haem-degrading 7 128 4.2E-33 T 01-11-2018 IPR005624 Haem-degrading CDA09_14870 77941a379c052a192bbfde4b622e1b59 78 SUPERFAMILY SSF49777 8 77 8.77E-18 T 01-11-2018 IPR036610 PEBP-like superfamily CDA09_14870 77941a379c052a192bbfde4b622e1b59 78 Pfam PF01161 Phosphatidylethanolamine-binding protein 11 75 6.2E-15 T 01-11-2018 IPR008914 Phosphatidylethanolamine-binding protein CDA09_14870 77941a379c052a192bbfde4b622e1b59 78 Gene3D G3DSA:3.90.280.10 2 78 3.1E-20 T 01-11-2018 IPR036610 PEBP-like superfamily CDA09_05845 2afc1bcfbba03fbda4473e44a7593079 457 Pfam PF06742 Protein of unknown function (DUF1214) 345 397 0.012 T 01-11-2018 IPR010621 Domain of unknown function DUF1214 CDA09_17640 969078e1034a488f3c4f8a6dca3d0932 352 Pfam PF06812 ImpA, N-terminal, type VI secretion system 12 128 9.6E-36 T 01-11-2018 IPR010657 ImpA, N-terminal CDA09_17640 969078e1034a488f3c4f8a6dca3d0932 352 TIGRFAM TIGR03363 VI_chp_8: type VI secretion-associated protein, ImpA family 1 343 4.3E-111 T 01-11-2018 IPR017740 Type VI secretion system-associated, ImpA CDA09_06395 9def8ead96d1fb6c974ffacef03e9daf 61 SUPERFAMILY SSF47598 3 47 2.22E-9 T 01-11-2018 IPR010985 Ribbon-helix-helix GO:0006355 CDA09_19190 60db3cc42a3552258a339c7a52835fb3 367 SUPERFAMILY SSF143422 16 194 1.12E-17 T 01-11-2018 IPR036515 Transposase IS200-like superfamily GO:0003677|GO:0004803|GO:0006313 CDA09_19190 60db3cc42a3552258a339c7a52835fb3 367 SMART SM01321 12 189 1.4E-5 T 01-11-2018 IPR002686 Transposase IS200-like GO:0003677|GO:0004803|GO:0006313 CDA09_11915 22678278a41becf7118517e86c50b0eb 245 Pfam PF08241 Methyltransferase domain 68 116 4.1E-9 T 01-11-2018 IPR013216 Methyltransferase type 11 GO:0008168 CDA09_11915 22678278a41becf7118517e86c50b0eb 245 Gene3D G3DSA:3.40.50.150 34 171 6.1E-19 T 01-11-2018 CDA09_11915 22678278a41becf7118517e86c50b0eb 245 SUPERFAMILY SSF53335 68 204 3.27E-16 T 01-11-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase CDA09_03085 ccf80a15e6c210dfab75e21050f80d26 701 Pfam PF07793 Protein of unknown function (DUF1631) 9 697 8.5E-95 T 01-11-2018 IPR012434 Protein of unknown function DUF1631 CDA09_17780 03c86fbebaf1ddd6fc4371601fed8ad1 345 Pfam PF02628 Cytochrome oxidase assembly protein 5 315 4.4E-82 T 01-11-2018 IPR003780 COX15/CtaA family GO:0006784|GO:0016021|GO:0016627|GO:0055114 Reactome: R-HSA-189451 CDA09_21020 ac8dcd22d007da9c85a96c5b215dc598 328 Pfam PF13280 WYL domain 146 320 3.2E-37 T 01-11-2018 IPR026881 WYL domain CDA09_21020 ac8dcd22d007da9c85a96c5b215dc598 328 Gene3D G3DSA:1.10.10.10 1 63 3.1E-6 T 01-11-2018 IPR036388 Winged helix-like DNA-binding domain superfamily CDA09_13965 099c3511e6a6f288bef0e126e475cff3 197 Pfam PF11198 Protein of unknown function (DUF2857) 11 180 1.8E-31 T 01-11-2018 IPR021364 Protein of unknown function DUF2857 CDA09_06870 d6327d773d07ea52486b733a46e3bb3b 109 Pfam PF05400 Flagellar protein FliT 17 104 7.9E-24 T 01-11-2018 IPR008622 Flagellar protein FliT CDA09_06870 d6327d773d07ea52486b733a46e3bb3b 109 Gene3D G3DSA:1.20.58.380 2 91 1.2E-20 T 01-11-2018 CDA09_18625 b7f965378eaddc6063a4b10bbfbb09c3 291 Pfam PF13557 Putative MetA-pathway of phenol degradation 64 277 1.4E-21 T 01-11-2018 IPR025737 MetA-pathway of phenol degradation, putative CDA09_05720 278a2b0f856f1f51b19c938629f681cb 211 Gene3D G3DSA:3.40.50.180 4 203 6.8E-72 T 01-11-2018 IPR035909 Methylesterase CheB, C-terminal CDA09_05720 278a2b0f856f1f51b19c938629f681cb 211 Pfam PF01339 CheB methylesterase 15 193 9.6E-60 T 01-11-2018 IPR000673 Signal transduction response regulator, chemotaxis, protein-glutamate methylesterase GO:0000156|GO:0000160|GO:0005737|GO:0006935|GO:0008984 CDA09_05720 278a2b0f856f1f51b19c938629f681cb 211 SUPERFAMILY SSF52738 13 197 3.14E-67 T 01-11-2018 IPR035909 Methylesterase CheB, C-terminal CDA09_11710 1eeb7a3dd8dc89ca9c30c66f860ff463 322 SUPERFAMILY SSF64182 5 309 7.48E-17 T 01-11-2018 IPR038763 DHH phosphoesterase superfamily CDA09_11710 1eeb7a3dd8dc89ca9c30c66f860ff463 322 Gene3D G3DSA:3.10.310.30 254 315 1.3E-11 T 01-11-2018 CDA09_11710 1eeb7a3dd8dc89ca9c30c66f860ff463 322 Pfam PF02272 DHHA1 domain 261 311 3.5E-6 T 01-11-2018 IPR003156 DHHA1 domain GO:0003676 KEGG: 00970+6.1.1.7|Reactome: R-HSA-379716 CDA09_11420 532532c0b4a5e9379da0abe1ec3864a4 237 Gene3D G3DSA:2.40.420.20 140 237 6.3E-11 T 01-11-2018 CDA09_14045 68c8b73c8860f608b087a6e8191532ee 513 TIGRFAM TIGR03752 conj_TIGR03752: integrating conjugative element protein, PFL_4705 family 34 492 9.2E-132 T 01-11-2018 IPR021207 Integrating conjugative element protein, PFL4705 CDA09_04890 102b2e8ce277a10102aa483c1430b533 167 SUPERFAMILY SSF55729 35 154 2.98E-14 T 01-11-2018 IPR016181 Acyl-CoA N-acyltransferase CDA09_04890 102b2e8ce277a10102aa483c1430b533 167 Gene3D G3DSA:3.40.630.30 3 161 6.6E-44 T 01-11-2018 CDA09_04890 102b2e8ce277a10102aa483c1430b533 167 Pfam PF13508 Acetyltransferase (GNAT) domain 44 146 2.6E-8 T 01-11-2018 IPR000182 GNAT domain CDA09_18335 e50f813b16b803e13a794a310df3c780 309 Pfam PF01553 Acyltransferase 106 221 1.8E-18 T 01-11-2018 IPR002123 Phospholipid/glycerol acyltransferase GO:0016746 CDA09_18335 e50f813b16b803e13a794a310df3c780 309 SUPERFAMILY SSF69593 71 230 3.53E-23 T 01-11-2018 CDA09_18335 e50f813b16b803e13a794a310df3c780 309 SMART SM00563 111 223 9.0E-27 T 01-11-2018 IPR002123 Phospholipid/glycerol acyltransferase GO:0016746 CDA09_15920 e1714290bc48471d4972f57c738ff8be 234 SUPERFAMILY SSF53335 46 217 3.44E-17 T 01-11-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase CDA09_15920 e1714290bc48471d4972f57c738ff8be 234 Gene3D G3DSA:3.40.50.150 17 224 3.0E-32 T 01-11-2018 CDA09_15920 e1714290bc48471d4972f57c738ff8be 234 Pfam PF02390 Putative methyltransferase 55 216 8.3E-14 T 01-11-2018 CDA09_06045 ae1fa597837b86f4fcb2c258cddf2d36 213 Pfam PF03886 ABC-type transport auxiliary lipoprotein component 36 198 7.4E-23 T 01-11-2018 IPR005586 ABC-type transport auxiliary lipoprotein component CDA09_06045 ae1fa597837b86f4fcb2c258cddf2d36 213 SUPERFAMILY SSF159594 34 204 2.62E-39 T 01-11-2018 CDA09_06045 ae1fa597837b86f4fcb2c258cddf2d36 213 Gene3D G3DSA:3.40.50.10610 25 212 5.3E-51 T 01-11-2018 CDA09_19950 4ee668185941a0eef88330584f27e95a 311 Pfam PF14378 PAP2 superfamily 99 280 3.5E-36 T 01-11-2018 IPR026841 Inositolphosphotransferase Aur1/Ipt1 CDA09_19950 4ee668185941a0eef88330584f27e95a 311 Gene3D G3DSA:1.20.144.10 214 303 5.0E-6 T 01-11-2018 CDA09_03615 2270cf1bbd335b95a29a6637672459b6 447 TIGRFAM TIGR03353 VI_chp_4: type VI secretion protein, VC_A0114 family 4 446 2.7E-137 T 01-11-2018 IPR010263 Type VI secretion protein, VC_A0114 CDA09_03615 2270cf1bbd335b95a29a6637672459b6 447 Pfam PF05936 Bacterial Type VI secretion, VC_A0110, EvfL, ImpJ, VasE 18 445 6.4E-132 T 01-11-2018 IPR010263 Type VI secretion protein, VC_A0114 CDA09_08060 79c952890e69b361812bc773dcdda8d1 195 SMART SM00867 32 190 2.8E-42 T 01-11-2018 IPR007372 Lipid/polyisoprenoid-binding, YceI-like CDA09_08060 79c952890e69b361812bc773dcdda8d1 195 SUPERFAMILY SSF101874 33 192 2.09E-41 T 01-11-2018 IPR036761 Lipid/polyisoprenoid-binding, YceI-like superfamily CDA09_08060 79c952890e69b361812bc773dcdda8d1 195 Pfam PF04264 YceI-like domain 32 189 6.0E-33 T 01-11-2018 IPR007372 Lipid/polyisoprenoid-binding, YceI-like CDA09_08060 79c952890e69b361812bc773dcdda8d1 195 Gene3D G3DSA:2.40.128.110 32 194 1.5E-39 T 01-11-2018 IPR036761 Lipid/polyisoprenoid-binding, YceI-like superfamily CDA09_01885 81bd176b167c9e2a92c2d3b4e036b59b 381 Pfam PF11306 Protein of unknown function (DUF3108) 156 360 2.6E-16 T 01-11-2018 IPR021457 Protein of unknown function DUF3108 CDA09_17115 aa10b49d213515a04c4b772c22407a7c 563 Pfam PF06980 Protein of unknown function (DUF1302) 34 563 2.3E-119 T 01-11-2018 IPR010727 Protein of unknown function DUF1302 CDA09_21465 6fc07f2eed4fc179134a4a3986f827ed 148 Pfam PF06139 BphX-like 4 133 1.1E-45 T 01-11-2018 IPR009310 BphX-like CDA09_20990 1744b62e9195a2cc19877aaee20c00c6 111 Pfam PF08895 Domain of unknown function (DUF1840) 1 109 3.1E-33 T 01-11-2018 IPR014991 Protein of unknown function DUF1840 CDA09_12545 be3b2be9fb692f72a2c1dd127ae2c8d1 312 SUPERFAMILY SSF53474 44 309 1.59E-46 T 01-11-2018 IPR029058 Alpha/Beta hydrolase fold CDA09_12545 be3b2be9fb692f72a2c1dd127ae2c8d1 312 PRINTS PR00111 Alpha/beta hydrolase fold signature 131 144 2.3E-7 T 01-11-2018 IPR000073 Alpha/beta hydrolase fold-1 CDA09_12545 be3b2be9fb692f72a2c1dd127ae2c8d1 312 PRINTS PR00111 Alpha/beta hydrolase fold signature 85 100 2.3E-7 T 01-11-2018 IPR000073 Alpha/beta hydrolase fold-1 CDA09_12545 be3b2be9fb692f72a2c1dd127ae2c8d1 312 PRINTS PR00111 Alpha/beta hydrolase fold signature 256 270 2.3E-7 T 01-11-2018 IPR000073 Alpha/beta hydrolase fold-1 CDA09_12545 be3b2be9fb692f72a2c1dd127ae2c8d1 312 Gene3D G3DSA:3.40.50.1820 32 310 1.4E-77 T 01-11-2018 IPR029058 Alpha/Beta hydrolase fold CDA09_12545 be3b2be9fb692f72a2c1dd127ae2c8d1 312 Pfam PF12697 Alpha/beta hydrolase family 62 301 7.5E-19 T 01-11-2018 IPR000073 Alpha/beta hydrolase fold-1 CDA09_06325 c8f46aca78d656009e0f004edb3ac9ec 364 Pfam PF13515 Fusaric acid resistance protein-like 211 336 8.0E-25 T 01-11-2018 CDA09_09340 1d7f32a072032a6e8178e9083822e5a9 368 Pfam PF11740 Plasmid replication region DNA-binding N-term 26 139 2.5E-18 T 01-11-2018 IPR021104 KfrA, N-terminal DNA-binding domain CDA09_21715 f5474eaf9c2fc8f2ec41f64864690cf6 82 Pfam PF13701 Transposase DDE domain group 1 14 60 2.1E-12 T 01-11-2018 IPR025668 Transposase DDE domain CDA09_15055 89a637f8599151bd933624c96eee1fa9 300 Pfam PF13280 WYL domain 135 205 4.6E-8 T 01-11-2018 IPR026881 WYL domain CDA09_15055 89a637f8599151bd933624c96eee1fa9 300 PIRSF PIRSF015558 10 300 8.0E-100 T 01-11-2018 IPR016634 WYL domain protein, s026 type CDA09_09045 d104158cf0458d99e3da20a54c07c4d5 485 SUPERFAMILY SSF103473 8 466 1.16E-46 T 01-11-2018 IPR036259 MFS transporter superfamily CDA09_09045 d104158cf0458d99e3da20a54c07c4d5 485 Pfam PF07690 Major Facilitator Superfamily 20 412 1.7E-36 T 01-11-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 CDA09_00630 8014df6ce9a36ec1d50a42d35d45beae 227 Pfam PF13852 Protein of unknown function (DUF4197) 25 223 4.2E-75 T 01-11-2018 IPR025245 Protein of unknown function DUF4197 CDA09_20805 7e2489808961949ae018737790651393 294 Pfam PF02653 Branched-chain amino acid transport system / permease component 16 282 1.0E-35 T 01-11-2018 IPR001851 ABC transporter, permease GO:0016020|GO:0022857|GO:0055085 CDA09_06685 c84d89b0179c802bfc9dad2496e62b63 84 TIGRFAM TIGR04164 cobo_pep: modified peptide precursor CbpA 59 80 1.6E-12 T 01-11-2018 IPR026421 Modified peptide precursor CbpA CDA09_08640 297d43d5f8bb401d3b5606a0d6a22af4 93 Pfam PF13670 Peptidase propeptide and YPEB domain 6 86 1.1E-14 T 01-11-2018 IPR025711 PepSY domain CDA09_18110 682ab987a42a570bdb79694c376195b9 105 PIRSF PIRSF019302 1 105 5.2E-45 T 01-11-2018 IPR016755 Uncharacterised conserved protein UCP019302 CDA09_18110 682ab987a42a570bdb79694c376195b9 105 Pfam PF10084 Uncharacterized protein conserved in bacteria (DUF2322) 3 100 6.1E-42 T 01-11-2018 IPR016755 Uncharacterised conserved protein UCP019302 CDA09_06410 23170d4b4be426e8c927bf5791ca603e 226 ProDom PD037531 MEMBRANE HYDROGENASE SUBUNIT COMPONENT HYDROGENASE-4 E OXIDOREDUCTASE PRECURSOR SIGNAL 1.-.-.- 30 197 3.0E-83 T 01-11-2018 CDA09_20045 f8525ec22af2b9ee8f2650f975f28cf4 102 Pfam PF04341 Protein of unknown function, DUF485 7 94 6.8E-32 T 01-11-2018 IPR007436 Protein of unknown function DUF485 CDA09_21535 4e2f33db6f2d36daf3cfba6e5cd94584 384 Pfam PF12698 ABC-2 family transporter protein 24 375 3.1E-40 T 01-11-2018 CDA09_15390 0bbda578442b6e0327b5ba63507810b9 831 Pfam PF02687 FtsX-like permease family 288 384 7.2E-9 T 01-11-2018 IPR003838 ABC transporter permease protein domain GO:0016020 CDA09_15390 0bbda578442b6e0327b5ba63507810b9 831 Pfam PF02687 FtsX-like permease family 735 821 1.1E-6 T 01-11-2018 IPR003838 ABC transporter permease protein domain GO:0016020 CDA09_02400 0ff75dce6dcc85317e0811c7ca3b105f 164 Gene3D G3DSA:3.50.70.20 22 162 1.9E-20 T 01-11-2018 IPR038142 Cytochrome P460 superfamily CDA09_02400 0ff75dce6dcc85317e0811c7ca3b105f 164 Pfam PF16694 Cytochrome P460 32 158 3.2E-39 T 01-11-2018 IPR032033 Cytochrome P460 CDA09_04820 24f02a3d9366798d082fd09af8e7ec74 102 Pfam PF04341 Protein of unknown function, DUF485 11 97 2.6E-35 T 01-11-2018 IPR007436 Protein of unknown function DUF485 CDA09_23075 08b7c94be416fc3f1e84d7d602f38a9a 273 Pfam PF07357 Dinitrogenase reductase ADP-ribosyltransferase (DRAT) 16 269 2.3E-106 T 01-11-2018 IPR009953 Dinitrogenase reductase ADP-ribosyltransferase GO:0009399|GO:0030701 CDA09_12410 c35ca4b545ce51a74413b88539be3793 108 Gene3D G3DSA:2.40.128.200 29 102 7.9E-9 T 01-11-2018 IPR036328 C-type lysozyme inhibitor superfamily CDA09_12410 c35ca4b545ce51a74413b88539be3793 108 Pfam PF09864 Membrane-bound lysozyme-inhibitor of c-type lysozyme 35 94 1.1E-7 T 01-11-2018 IPR018660 C-type lysozyme inhibitor CDA09_12410 c35ca4b545ce51a74413b88539be3793 108 SUPERFAMILY SSF141488 31 102 2.62E-10 T 01-11-2018 IPR036328 C-type lysozyme inhibitor superfamily CDA09_12305 d5b8a3e3f5c72be44cb889a153df2a0a 66 Pfam PF04102 SlyX 1 66 4.8E-20 T 01-11-2018 IPR007236 SlyX CDA09_15160 1304a598b34f3d85b8416b9494cff1e6 81 Pfam PF10038 Protein of unknown function (DUF2274) 5 71 7.6E-26 T 01-11-2018 IPR018733 Protein of unknown function DUF2274 CDA09_14565 e10726a6abd103af3669a11e9a25ccb7 185 Pfam PF09361 Phasin protein 8 101 5.3E-11 T 01-11-2018 IPR018968 Phasin CDA09_01150 92cfc59810f7506743c646e04b070fd5 184 SUPERFAMILY SSF52833 60 180 4.87E-28 T 01-11-2018 IPR036249 Thioredoxin-like superfamily CDA09_01150 92cfc59810f7506743c646e04b070fd5 184 Pfam PF00578 AhpC/TSA family 61 150 1.0E-12 T 01-11-2018 IPR000866 Alkyl hydroperoxide reductase subunit C/ Thiol specific antioxidant GO:0016209|GO:0016491|GO:0055114 KEGG: 00480+1.11.1.15|Reactome: R-HSA-3299685 CDA09_01150 92cfc59810f7506743c646e04b070fd5 184 Gene3D G3DSA:3.40.30.10 29 178 6.6E-27 T 01-11-2018 CDA09_05120 dfa0782be9d581ff422479872384b6d3 232 Gene3D G3DSA:1.20.120.1630 4 199 6.4E-8 T 01-11-2018 CDA09_17030 0864a17fb2961a432a7ebe0e6d4b5824 230 SUPERFAMILY SSF69118 5 221 2.75E-28 T 01-11-2018 IPR029032 AhpD-like Reactome: R-HSA-5628897 CDA09_17030 0864a17fb2961a432a7ebe0e6d4b5824 230 Pfam PF02627 Carboxymuconolactone decarboxylase family 150 221 5.8E-9 T 01-11-2018 IPR003779 Carboxymuconolactone decarboxylase-like GO:0051920|GO:0055114 KEGG: 00480+1.11.1.15 CDA09_17030 0864a17fb2961a432a7ebe0e6d4b5824 230 Gene3D G3DSA:1.20.1290.10 2 96 2.5E-7 T 01-11-2018 IPR029032 AhpD-like Reactome: R-HSA-5628897 CDA09_17030 0864a17fb2961a432a7ebe0e6d4b5824 230 Gene3D G3DSA:1.20.1290.10 118 228 3.2E-23 T 01-11-2018 IPR029032 AhpD-like Reactome: R-HSA-5628897 CDA09_00430 bdf4e85e05645157054842d94e0309ec 72 Pfam PF13619 KTSC domain 13 66 5.0E-17 T 01-11-2018 IPR025309 KTSC domain CDA09_15560 8e69876d1993072f8a4592245ca4135a 147 Gene3D G3DSA:3.30.300.20 1 146 2.1E-40 T 01-11-2018 IPR015946 K homology domain-like, alpha/beta CDA09_15560 8e69876d1993072f8a4592245ca4135a 147 SUPERFAMILY SSF82784 1 145 2.75E-35 T 01-11-2018 IPR036102 OsmC/Ohr superfamily CDA09_15560 8e69876d1993072f8a4592245ca4135a 147 Pfam PF02566 OsmC-like protein 46 145 6.0E-15 T 01-11-2018 IPR003718 OsmC/Ohr family CDA09_13825 f89204fbcb20f8335945522d4004db94 266 Pfam PF00378 Enoyl-CoA hydratase/isomerase 8 265 7.3E-61 T 01-11-2018 IPR001753 Enoyl-CoA hydratase/isomerase GO:0003824 CDA09_13825 f89204fbcb20f8335945522d4004db94 266 Gene3D G3DSA:3.90.226.10 2 206 8.7E-67 T 01-11-2018 CDA09_13825 f89204fbcb20f8335945522d4004db94 266 SUPERFAMILY SSF52096 3 266 1.76E-84 T 01-11-2018 IPR029045 ClpP/crotonase-like domain superfamily CDA09_13825 f89204fbcb20f8335945522d4004db94 266 Gene3D G3DSA:1.10.12.10 209 265 4.9E-21 T 01-11-2018 IPR014748 Enoyl-CoA hydratase, C-terminal CDA09_17955 44c0d9331f0a7027bfb1387ea317cf03 1288 Pfam PF04357 TamB, inner membrane protein subunit of TAM complex 939 1287 4.3E-39 T 01-11-2018 IPR007452 Translocation and assembly module TamB CDA09_13595 a8b53b9b24e2cf8cdc39e2d4b02c509e 283 Gene3D G3DSA:3.40.50.720 1 278 6.8E-70 T 01-11-2018 CDA09_13595 a8b53b9b24e2cf8cdc39e2d4b02c509e 283 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 219 239 4.9E-33 T 01-11-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CDA09_13595 a8b53b9b24e2cf8cdc39e2d4b02c509e 283 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 9 26 4.9E-33 T 01-11-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CDA09_13595 a8b53b9b24e2cf8cdc39e2d4b02c509e 283 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 177 194 4.9E-33 T 01-11-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CDA09_13595 a8b53b9b24e2cf8cdc39e2d4b02c509e 283 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 83 94 4.9E-33 T 01-11-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CDA09_13595 a8b53b9b24e2cf8cdc39e2d4b02c509e 283 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 156 175 4.9E-33 T 01-11-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CDA09_13595 a8b53b9b24e2cf8cdc39e2d4b02c509e 283 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 130 146 4.9E-33 T 01-11-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CDA09_13595 a8b53b9b24e2cf8cdc39e2d4b02c509e 283 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 14 255 7.0E-50 T 01-11-2018 CDA09_13595 a8b53b9b24e2cf8cdc39e2d4b02c509e 283 SUPERFAMILY SSF51735 1 256 1.22E-68 T 01-11-2018 IPR036291 NAD(P)-binding domain superfamily CDA09_14355 e77c46c3a4f6557bd71bfa72978d83a4 560 Gene3D G3DSA:3.20.20.80 93 296 1.3E-13 T 01-11-2018 CDA09_14355 e77c46c3a4f6557bd71bfa72978d83a4 560 SUPERFAMILY SSF51445 50 318 6.03E-50 T 01-11-2018 IPR017853 Glycoside hydrolase superfamily CDA09_10740 66a5cdd96c596adb0a522a3b70d9752f 329 Gene3D G3DSA:2.120.10.30 135 239 8.9E-30 T 01-11-2018 IPR011042 Six-bladed beta-propeller, TolB-like CDA09_10740 66a5cdd96c596adb0a522a3b70d9752f 329 Gene3D G3DSA:2.120.10.30 30 134 1.5E-29 T 01-11-2018 IPR011042 Six-bladed beta-propeller, TolB-like CDA09_10740 66a5cdd96c596adb0a522a3b70d9752f 329 Pfam PF17170 6-bladed beta-propeller 99 170 2.7E-7 T 01-11-2018 CDA09_10740 66a5cdd96c596adb0a522a3b70d9752f 329 Pfam PF01436 NHL repeat 254 275 8.8E-5 T 01-11-2018 IPR001258 NHL repeat GO:0005515 CDA09_10740 66a5cdd96c596adb0a522a3b70d9752f 329 Pfam PF01436 NHL repeat 195 222 1.0E-6 T 01-11-2018 IPR001258 NHL repeat GO:0005515 CDA09_10740 66a5cdd96c596adb0a522a3b70d9752f 329 Pfam PF01436 NHL repeat 53 79 1.0E-6 T 01-11-2018 IPR001258 NHL repeat GO:0005515 CDA09_10740 66a5cdd96c596adb0a522a3b70d9752f 329 SUPERFAMILY SSF63829 21 326 1.11E-47 T 01-11-2018 CDA09_10740 66a5cdd96c596adb0a522a3b70d9752f 329 Gene3D G3DSA:2.120.10.30 240 328 2.6E-20 T 01-11-2018 IPR011042 Six-bladed beta-propeller, TolB-like CDA09_01125 90c17dd423b37de15742966fae0684a6 184 Pfam PF05239 PRC-barrel domain 54 122 2.9E-10 T 01-11-2018 IPR027275 PRC-barrel domain CDA09_01125 90c17dd423b37de15742966fae0684a6 184 Gene3D G3DSA:2.30.30.240 39 127 1.0E-15 T 01-11-2018 CDA09_01125 90c17dd423b37de15742966fae0684a6 184 SUPERFAMILY SSF50346 46 147 1.27E-15 T 01-11-2018 IPR011033 PRC-barrel-like superfamily CDA09_12970 7d39e350147af0590ac70d0d0dd52d46 250 Pfam PF09955 Predicted integral membrane protein (DUF2189) 62 181 7.2E-23 T 01-11-2018 IPR018692 Predicted integral membrane protein DUF2189 CDA09_19335 03cd547a64e3552106ba9b4ed6e795cc 441 Pfam PF07044 Protein of unknown function (DUF1329) 43 422 6.9E-64 T 01-11-2018 IPR010752 Protein of unknown function DUF1329 CDA09_13025 52f7dd01674a99c58cf633317d3deff9 256 Pfam PF11828 Protein of unknown function (DUF3348) 1 249 9.4E-90 T 01-11-2018 IPR021783 Protein of unknown function DUF3348 CDA09_06355 3d3991315aec0825c341e79edd317de6 400 SUPERFAMILY SSF111352 7 374 5.36E-96 T 01-11-2018 CDA09_06355 3d3991315aec0825c341e79edd317de6 400 ProSitePatterns PS01219 Ammonium transporters signature. 156 181 - T 01-11-2018 IPR018047 Ammonium transporter, conserved site GO:0008519|GO:0016020|GO:0072488 CDA09_06355 3d3991315aec0825c341e79edd317de6 400 Gene3D G3DSA:1.10.3430.10 1 399 4.0E-100 T 01-11-2018 IPR029020 Ammonium/urea transporter CDA09_06355 3d3991315aec0825c341e79edd317de6 400 Pfam PF00909 Ammonium Transporter Family 12 391 1.0E-87 T 01-11-2018 IPR024041 Ammonium transporter AmtB-like domain GO:0008519|GO:0015696|GO:0016020 CDA09_23005 a0e3d087de61a005a36f9e98483e6811 198 Pfam PF14334 Domain of unknown function (DUF4390) 38 191 7.6E-58 T 01-11-2018 IPR025500 Protein of unknown function DUF4390 CDA09_07010 4dcfa805bc58a810ab1214a72c565684 270 Pfam PF09407 AbiEi antitoxin C-terminal domain 73 213 5.0E-27 T 01-11-2018 IPR018547 AbiEi antitoxin C-terminal domain CDA09_22135 77e59992c31dc2743479d6bfe5cdebe4 121 Pfam PF11284 Protein of unknown function (DUF3085) 22 112 3.6E-34 T 01-11-2018 IPR021436 Protein of unknown function DUF3085 CDA09_13970 d2ea0b387a252f9a1be9167c31b0c3e0 458 TIGRFAM TIGR03764 ICE_PFGI_1_parB: integrating conjugative element, PFGI_1 class, ParB family protein 57 263 2.5E-45 T 01-11-2018 IPR022304 Integrating conjugative element, PFGI-1, ParB CDA09_13970 d2ea0b387a252f9a1be9167c31b0c3e0 458 SUPERFAMILY SSF110849 58 153 8.89E-7 T 01-11-2018 IPR036086 ParB/Sulfiredoxin superfamily CDA09_17110 b50ed640aff64b0b88f5acb407aafbc0 457 Pfam PF07044 Protein of unknown function (DUF1329) 84 451 8.2E-128 T 01-11-2018 IPR010752 Protein of unknown function DUF1329 CDA09_18020 862508498d30656051a871a8080eec68 233 Pfam PF04290 Tripartite ATP-independent periplasmic transporters, DctQ component 22 175 1.4E-19 T 01-11-2018 IPR007387 TRAP transporter, small membrane protein DctQ CDA09_00295 88848970d21082547f6c47319a604837 113 Gene3D G3DSA:3.10.450.530 1 86 6.3E-21 T 01-11-2018 IPR038573 Ribonuclease toxin BrnT superfamily CDA09_00295 88848970d21082547f6c47319a604837 113 Pfam PF04365 Ribonuclease toxin, BrnT, of type II toxin-antitoxin system 7 84 2.3E-16 T 01-11-2018 IPR007460 Ribonuclease toxin, BrnT, of type II toxin-antitoxin system CDA09_03570 885c3f26eb3cfbb3f4fe10bcb449b2a5 325 Pfam PF04168 A predicted alpha-helical domain with a conserved ER motif. 1 314 1.6E-104 T 01-11-2018 IPR007296 Domain of unknown function DUF403 CDA09_12825 32eff11fdaf7872fa452ad25b1871be4 146 Pfam PF10116 Protein required for attachment to host cells 5 140 9.3E-39 T 01-11-2018 IPR019291 Host attachment protein CDA09_01005 64fb67ef2f19570230e24d0adb756b26 136 Pfam PF11162 Protein of unknown function (DUF2946) 18 123 6.2E-6 T 01-11-2018 IPR021333 Protein of unknown function DUF2946 CDA09_08605 b1e6e4f1e7a0b67f0a29a8513482eb3b 602 Pfam PF02538 Hydantoinase B/oxoprolinase 9 536 8.6E-149 T 01-11-2018 IPR003692 Hydantoinase B/oxoprolinase GO:0003824 Reactome: R-HSA-174403|Reactome: R-HSA-5578998 CDA09_17315 5e1bc68304b073ad9d23850e11dbcb44 246 Pfam PF01618 MotA/TolQ/ExbB proton channel family 103 219 3.1E-25 T 01-11-2018 IPR002898 MotA/TolQ/ExbB proton channel CDA09_20270 6f0d59026dac4a480a71839c90b69676 118 Pfam PF01219 Prokaryotic diacylglycerol kinase 12 111 3.6E-27 T 01-11-2018 IPR000829 DAGK family GO:0008654|GO:0016020|GO:0016301 KEGG: 00561+2.7.1.107|KEGG: 00564+2.7.1.107|KEGG: 04070+2.7.1.107|MetaCyc: PWY-7039|MetaCyc: PWY-7817 CDA09_20270 6f0d59026dac4a480a71839c90b69676 118 Gene3D G3DSA:1.10.3830.10 2 117 2.6E-32 T 01-11-2018 IPR036945 Diacylglycerol kinase (DAGK) superfamily GO:0008610|GO:0016020|GO:0016301 KEGG: 00561+2.7.1.107|KEGG: 00564+2.7.1.107|KEGG: 04070+2.7.1.107|MetaCyc: PWY-7039|MetaCyc: PWY-7817 CDA09_03380 0a71876d9f67c762cb94c4f1e6948be4 117 Pfam PF11142 Protein of unknown function (DUF2917) 10 67 3.4E-14 T 01-11-2018 IPR021317 Protein of unknown function DUF2917 CDA09_06200 cc9c5eeeee9dfaf43418af34fc129373 120 Pfam PF04342 Putative member of DMT superfamily (DUF486) 14 118 3.2E-45 T 01-11-2018 IPR007437 Protein of unknown function DUF486 CDA09_06200 cc9c5eeeee9dfaf43418af34fc129373 120 PIRSF PIRSF021239 8 120 1.0E-51 T 01-11-2018 IPR007437 Protein of unknown function DUF486 CDA09_05075 afbf985120d1aff1cd31fd534e8888ac 248 Pfam PF03808 Glycosyl transferase WecB/TagA/CpsF family 68 228 4.3E-33 T 01-11-2018 IPR004629 Glycosyl transferase WecB/TagA/CpsF GO:0009058 CDA09_06260 8431d8be861e36373fa63f3c5ec254ae 386 Pfam PF05940 NnrS protein 7 380 1.2E-74 T 01-11-2018 IPR010266 NnrS CDA09_14075 ed7e44a04c84d5af42cb5c6715027660 529 Pfam PF07916 TraG-like protein, N-terminal region 8 502 3.9E-65 T 01-11-2018 IPR012931 TraG-like, N-terminal CDA09_17500 f38a7051d0af2aeabf0c2c81aec8abc4 344 Gene3D G3DSA:3.30.70.3460 212 344 6.2E-37 T 01-11-2018 CDA09_17500 f38a7051d0af2aeabf0c2c81aec8abc4 344 Gene3D G3DSA:3.30.70.3460 77 189 5.8E-17 T 01-11-2018 CDA09_01565 fcc3c9ef3ef9a1ac539726ec4758e24d 118 Pfam PF10006 Uncharacterized conserved protein (DUF2249) 14 81 5.0E-25 T 01-11-2018 IPR018720 Domain of unknown function DUF2249 CDA09_04980 03d5b55e311fd129e7c0307d55a7a956 414 Pfam PF04375 HemX, putative uroporphyrinogen-III C-methyltransferase 39 371 1.4E-74 T 01-11-2018 IPR007470 Putative uroporphyrinogen-III C-methyltransferase HemX CDA09_15110 33dfcb06a2afe13896b8aaf085cd8fbe 154 SUPERFAMILY SSF47598 4 42 3.06E-7 T 01-11-2018 IPR010985 Ribbon-helix-helix GO:0006355 CDA09_20150 192261e05bd4532a0b2f071d25cbf652 521 Pfam PF03929 PepSY-associated TM region 10 282 2.2E-9 T 01-11-2018 IPR005625 PepSY-associated TM protein CDA09_16990 6b521fccb6b7db4181b9ba0dcdfb2592 254 Pfam PF11136 Protein of unknown function (DUF2889) 32 104 9.8E-5 T 01-11-2018 IPR021312 Protein of unknown function DUF2889 CDA09_13340 9fb11b39f9bac99cb11f50e5a39c1a82 392 Pfam PF05762 VWA domain containing CoxE-like protein 184 271 4.1E-10 T 01-11-2018 IPR008912 Uncharacterised protein family CoxE-like CDA09_15770 91058e2f759a0b72fb826ea7b3b0eeb3 422 Hamap MF_01232 UPF0229 protein YeaH [yeaH]. 1 422 38.557 T 01-11-2018 IPR006698 Uncharacterised protein family UPF0229 CDA09_15770 91058e2f759a0b72fb826ea7b3b0eeb3 422 Pfam PF04285 Protein of unknown function (DUF444) 4 419 1.1E-180 T 01-11-2018 IPR006698 Uncharacterised protein family UPF0229 CDA09_20980 c99a444ea7a956a148d9ceee0cc7c7b4 105 Pfam PF13997 YqjK-like protein 18 87 1.1E-14 T 01-11-2018 IPR025612 YqjK-like protein CDA09_21840 60397bd44580fc61b1a98beecf4edfab 290 Pfam PF02653 Branched-chain amino acid transport system / permease component 10 277 1.9E-40 T 01-11-2018 IPR001851 ABC transporter, permease GO:0016020|GO:0022857|GO:0055085 CDA09_18370 3763486d701709e3b403f718eaa2e0da 322 SUPERFAMILY SSF53448 20 247 1.03E-38 T 01-11-2018 IPR029044 Nucleotide-diphospho-sugar transferases CDA09_18370 3763486d701709e3b403f718eaa2e0da 322 Pfam PF00535 Glycosyl transferase family 2 23 128 5.4E-11 T 01-11-2018 IPR001173 Glycosyltransferase 2-like Reactome: R-HSA-913709 CDA09_18370 3763486d701709e3b403f718eaa2e0da 322 Gene3D G3DSA:3.90.550.10 7 253 5.6E-30 T 01-11-2018 IPR029044 Nucleotide-diphospho-sugar transferases CDA09_12795 2416f65419526f4623c5273ef52c326f 369 Pfam PF02405 Permease MlaE 152 360 1.0E-63 T 01-11-2018 IPR030802 ABC transporter permease MalE GO:0043190 CDA09_20220 2065168dda86d05fee11c3ff8f2003a4 410 SUPERFAMILY SSF46626 286 410 2.13E-21 T 01-11-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 CDA09_20220 2065168dda86d05fee11c3ff8f2003a4 410 Gene3D G3DSA:1.10.760.10 291 410 1.5E-20 T 01-11-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 CDA09_21300 9a65e8a785a8b38213614df7d5143607 133 Pfam PF04343 Protein of unknown function, DUF488 15 122 1.7E-13 T 01-11-2018 IPR007438 Protein of unknown function DUF488 CDA09_14105 5e6ae9d38418b58eb968aed05ca88b9f 186 SUPERFAMILY SSF69318 82 156 3.14E-5 T 01-11-2018 CDA09_17895 0db9076284dec968f7544a79c1b869da 310 Pfam PF02653 Branched-chain amino acid transport system / permease component 8 294 7.8E-46 T 01-11-2018 IPR001851 ABC transporter, permease GO:0016020|GO:0022857|GO:0055085 CDA09_16440 8cfa3de296d98f0e212e8e23c422702e 201 Pfam PF02361 Cobalt transport protein 7 146 4.0E-10 T 01-11-2018 IPR003339 ABC/ECF transporter, transmembrane component CDA09_10580 5407ad80e95389cc3e1b4d02e0ea53a8 312 Pfam PF02653 Branched-chain amino acid transport system / permease component 28 291 5.7E-38 T 01-11-2018 IPR001851 ABC transporter, permease GO:0016020|GO:0022857|GO:0055085 CDA09_18760 266a08ce5cab453d7fb2f8f81239307e 192 Pfam PF02325 YGGT family 12 78 6.1E-16 T 01-11-2018 IPR003425 CCB3/YggT GO:0016020 CDA09_18760 266a08ce5cab453d7fb2f8f81239307e 192 Pfam PF02325 YGGT family 112 179 4.5E-14 T 01-11-2018 IPR003425 CCB3/YggT GO:0016020 CDA09_09055 8d8e2186241cd3b3eebf229fe351fdec 111 Gene3D G3DSA:3.30.450.20 26 111 1.7E-7 T 01-11-2018 CDA09_08835 be72169aee49ebeac7330e7494d23a99 337 Gene3D G3DSA:3.90.850.10 1 335 9.2E-139 T 01-11-2018 IPR036663 Fumarylacetoacetase-like, C-terminal domain superfamily GO:0003824 CDA09_08835 be72169aee49ebeac7330e7494d23a99 337 Pfam PF01557 Fumarylacetoacetate (FAA) hydrolase family 81 331 1.1E-42 T 01-11-2018 IPR011234 Fumarylacetoacetase-like, C-terminal GO:0003824 CDA09_08835 be72169aee49ebeac7330e7494d23a99 337 SUPERFAMILY SSF56529 76 332 6.93E-57 T 01-11-2018 IPR036663 Fumarylacetoacetase-like, C-terminal domain superfamily GO:0003824 CDA09_00505 070d4936a19b8d4b60d59b1e651f5f81 200 Pfam PF02036 SCP-2 sterol transfer family 16 104 2.1E-7 T 01-11-2018 IPR003033 SCP2 sterol-binding domain CDA09_00340 3f3ac8e484e382a2a97fb4dd9e644d1d 68 PIRSF PIRSF036704 1 68 6.5E-16 T 01-11-2018 IPR014177 Putative formate dehydrogenase, TAT signal-containing CDA09_18265 9cd02cbb267b7e2d75489e8b1b322805 210 Pfam PF04972 BON domain 65 121 2.9E-13 T 01-11-2018 IPR007055 BON domain CDA09_18265 9cd02cbb267b7e2d75489e8b1b322805 210 Pfam PF04972 BON domain 131 196 2.4E-14 T 01-11-2018 IPR007055 BON domain CDA09_18265 9cd02cbb267b7e2d75489e8b1b322805 210 SMART SM00749 58 121 51.0 T 01-11-2018 IPR014004 Transport-associated and nodulation domain, bacteria CDA09_18265 9cd02cbb267b7e2d75489e8b1b322805 210 SMART SM00749 136 199 2.7E-12 T 01-11-2018 IPR014004 Transport-associated and nodulation domain, bacteria CDA09_15500 dd4ee2ea779697f4ffdf07f6627c11cb 298 Pfam PF04976 DMSO reductase anchor subunit (DmsC) 23 148 6.7E-7 T 01-11-2018 IPR007059 DMSO reductase anchor subunit (DmsC) GO:0016021|GO:0019645 CDA09_22250 c219165f258f7c07bdc224ce858a91d0 330 Pfam PF02653 Branched-chain amino acid transport system / permease component 43 311 2.9E-40 T 01-11-2018 IPR001851 ABC transporter, permease GO:0016020|GO:0022857|GO:0055085 CDA09_00650 7fe6602f9c13ce5e2ebf6e6918c12561 365 Pfam PF03916 Polysulphide reductase, NrfD 12 311 1.5E-32 T 01-11-2018 IPR005614 NrfD family CDA09_06225 daf616ec55ee61ba4ea69012500bff00 362 Pfam PF01594 AI-2E family transporter 18 337 4.5E-54 T 01-11-2018 IPR002549 Transmembrane protein TqsA-like CDA09_12260 8085b91098d67584fa12353a3c56905c 301 SUPERFAMILY SSF103481 47 151 3.53E-15 T 01-11-2018 CDA09_12260 8085b91098d67584fa12353a3c56905c 301 Pfam PF00892 EamA-like transporter family 22 147 5.3E-16 T 01-11-2018 IPR000620 EamA domain GO:0016020|GO:0016021 CDA09_12260 8085b91098d67584fa12353a3c56905c 301 Pfam PF00892 EamA-like transporter family 162 295 5.5E-13 T 01-11-2018 IPR000620 EamA domain GO:0016020|GO:0016021 CDA09_12260 8085b91098d67584fa12353a3c56905c 301 SUPERFAMILY SSF103481 203 299 4.84E-9 T 01-11-2018 CDA09_03905 5d7c785d6ec529ad3b86c0dc91371849 243 Pfam PF05036 Sporulation related domain 131 198 2.0E-8 T 01-11-2018 IPR007730 Sporulation-like domain GO:0042834 CDA09_03905 5d7c785d6ec529ad3b86c0dc91371849 243 Pfam PF05036 Sporulation related domain 98 164 3.1E-4 T 01-11-2018 IPR007730 Sporulation-like domain GO:0042834 CDA09_07005 50ae54e55a735ca2810f60914c9f6115 267 Pfam PF08843 Nucleotidyl transferase AbiEii toxin, Type IV TA system 14 241 9.6E-27 T 01-11-2018 IPR014942 Nucleotidyl transferase AbiEii toxin, Type IV TA system CDA09_12240 5659c1b2cc1dae8fa1a00f5aeeb74a7a 304 Pfam PF02653 Branched-chain amino acid transport system / permease component 8 288 2.6E-54 T 01-11-2018 IPR001851 ABC transporter, permease GO:0016020|GO:0022857|GO:0055085 CDA09_21585 fe03abb399707d9e65498eec6bcbf1fb 286 Pfam PF11154 Protein of unknown function (DUF2934) 26 61 7.2E-13 T 01-11-2018 IPR021327 Protein of unknown function DUF2934 CDA09_19965 43a8b780f11f88b130527809d5a2afc5 57 Pfam PF04964 Flp/Fap pilin component 7 52 1.7E-21 T 01-11-2018 IPR007047 Flp/Fap pilin component CDA09_17620 5e871ae1b77e8a4b473c769a4ae7d94b 466 SUPERFAMILY SSF53901 298 374 2.51E-5 T 01-11-2018 IPR016039 Thiolase-like GO:0003824 CDA09_12470 9aa6c5f3b74a68489cbeac4d085ae60d 306 Pfam PF03706 Lysylphosphatidylglycerol synthase TM region 4 275 1.2E-18 T 01-11-2018 IPR022791 Lysylphosphatidylglycerol synthetase/glycosyltransferase AglD CDA09_04925 f9e2458bbaab0f844330c64b10f53289 259 Pfam PF01925 Sulfite exporter TauE/SafE 7 256 5.2E-38 T 01-11-2018 IPR002781 Transmembrane protein TauE-like GO:0016021 CDA09_16935 950e522f36c6315ffd3679675a1f2ac1 1117 Pfam PF05567 Neisseria PilC beta-propeller domain 688 940 2.3E-20 T 01-11-2018 IPR008707 PilC beta-propeller domain CDA09_01190 d56c1c7151d2990674071a6a84d50e44 353 Pfam PF14351 Domain of unknown function (DUF4401) 34 346 8.5E-32 T 01-11-2018 IPR025513 Domain of unknown function DUF4401 CDA09_14845 e7c91a94d4f5f86e0e47d9c149d3ea71 157 Pfam PF07012 Curlin associated repeat 94 124 9.7E-6 T 01-11-2018 IPR009742 Curlin associated GO:0007155|GO:0009289 CDA09_14845 e7c91a94d4f5f86e0e47d9c149d3ea71 157 Pfam PF07012 Curlin associated repeat 124 155 2.6E-5 T 01-11-2018 IPR009742 Curlin associated GO:0007155|GO:0009289 CDA09_05095 2fabc726e17441187b7a46681a87b76b 257 Pfam PF09955 Predicted integral membrane protein (DUF2189) 69 192 2.7E-38 T 01-11-2018 IPR018692 Predicted integral membrane protein DUF2189 CDA09_01975 37455c9a8d645009982ca63f0e1c717c 108 Pfam PF09350 Domain of unknown function (DUF1992) 8 74 9.2E-24 T 01-11-2018 IPR018961 DnaJ homologue, subfamily C, member 28, conserved domain CDA09_17660 70608654390fe62a58f11d1e2c0a7342 256 Pfam PF07264 Etoposide-induced protein 2.4 (EI24) 8 219 1.4E-23 T 01-11-2018 CDA09_22060 33e21cb83775358840f8d535f7196943 232 TIGRFAM TIGR03759 conj_TIGR03759: integrating conjugative element protein, PFL_4693 family 36 230 1.5E-86 T 01-11-2018 IPR022293 Integrating conjugative element protein, PFL4693 CDA09_06090 e5276810ec6c61758c1e4340a28629ea 119 Pfam PF09842 Predicted membrane protein (DUF2069) 10 109 1.3E-29 T 01-11-2018 IPR018643 Protein of unknown function DUF2069, membrane CDA09_09090 235c540c41b38ee8d715534e6f8ba3dc 454 Pfam PF07044 Protein of unknown function (DUF1329) 83 449 2.3E-111 T 01-11-2018 IPR010752 Protein of unknown function DUF1329 CDA09_00045 95ed26088348ca9c6d1b97f8eda76814 500 Pfam PF13384 Homeodomain-like domain 14 47 5.5E-6 T 01-11-2018 CDA09_00045 95ed26088348ca9c6d1b97f8eda76814 500 Pfam PF00665 Integrase core domain 129 253 7.6E-15 T 01-11-2018 IPR001584 Integrase, catalytic core GO:0015074 CDA09_08100 72091210b4c13d8c2f31393aabc303ea 82 Pfam PF14090 Helix-turn-helix domain 9 76 3.1E-22 T 01-11-2018 CDA09_12490 d42194d2c77d96677d6f58c6dc764ff0 142 Pfam PF04519 Polymer-forming cytoskeletal 18 117 1.7E-23 T 01-11-2018 IPR007607 Bactofilin A/B CDA09_02140 a48ec8c471347cbbf234187142aac2f5 505 Gene3D G3DSA:1.20.1730.10 19 488 1.8E-73 T 01-11-2018 IPR038377 Sodium/glucose symporter superfamily CDA09_02140 a48ec8c471347cbbf234187142aac2f5 505 Pfam PF00474 Sodium:solute symporter family 30 426 4.1E-38 T 01-11-2018 IPR001734 Sodium/solute symporter GO:0016020|GO:0022857|GO:0055085 CDA09_12080 f838e61492d82741f95942d0970beee4 288 Pfam PF02653 Branched-chain amino acid transport system / permease component 10 277 2.6E-40 T 01-11-2018 IPR001851 ABC transporter, permease GO:0016020|GO:0022857|GO:0055085 CDA09_22110 943288d0546cb46baf609a8d99960850 388 SUPERFAMILY SSF56281 7 283 3.34E-9 T 01-11-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like CDA09_01445 c90502090b01d19f66b2c91c0f0afb6a 506 SUPERFAMILY SSF56935 9 275 9.52E-5 T 01-11-2018 CDA09_17080 92ca537a7fdf5c1bb8cdd384055afab8 127 SUPERFAMILY SSF54909 1 81 5.67E-8 T 01-11-2018 IPR011008 Dimeric alpha-beta barrel CDA09_10995 064e6e0045f501d6549ce039e21c9753 230 Pfam PF03591 AzlC protein 17 158 6.6E-38 T 01-11-2018 IPR011606 Branched-chain amino acid transport, permease CDA09_13590 8d43331ea08f9a33819d36cd4a3d0b88 566 Pfam PF06980 Protein of unknown function (DUF1302) 34 566 9.3E-118 T 01-11-2018 IPR010727 Protein of unknown function DUF1302 CDA09_01760 82b7bed72f87d7614b48c6817d048207 420 Pfam PF07399 Putative Na+/H+ antiporter 7 420 4.3E-188 T 01-11-2018 IPR009978 Putative Na+/H+ antiporter CDA09_06800 dc5756cce421661d7e110fdb7bf7dbc4 185 Pfam PF03748 Flagellar basal body-associated protein FliL 75 185 1.1E-25 T 01-11-2018 IPR005503 Flagellar basal body-associated protein FliL GO:0006935|GO:0009425|GO:0071973 CDA09_07565 4385e38f9fa9b6be18e5c20608d6efdf 150 Pfam PF09828 Chromate resistance exported protein 3 136 3.7E-49 T 01-11-2018 IPR018634 Chromate resistance exported protein CDA09_08270 598621c2f7a123c93f913abeb827d55a 489 Pfam PF13231 Dolichyl-phosphate-mannose-protein mannosyltransferase 61 219 3.1E-26 T 01-11-2018 IPR038731 Glycosyltransferase RgtA/B/C/D-like CDA09_06625 ccf7de033eb1d4be40190bcffbb42057 182 Pfam PF02417 Chromate transporter 11 177 2.8E-30 T 01-11-2018 IPR003370 Chromate transporter GO:0015109|GO:0015703 CDA09_19000 e9bd566732c9c2b125d7bafa3662d3b0 462 Pfam PF12801 4Fe-4S binding domain 71 108 6.3E-8 T 01-11-2018 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain CDA09_19000 e9bd566732c9c2b125d7bafa3662d3b0 462 Pfam PF12801 4Fe-4S binding domain 156 189 7.2E-5 T 01-11-2018 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain CDA09_06680 e70b66840011738ddef336382419cffa 165 Gene3D G3DSA:3.10.450.160 58 163 3.2E-9 T 01-11-2018 CDA09_13985 abd4fc73cb1c6c1e9c9fc4b1cdd5f74a 161 TIGRFAM TIGR03748 conj_PilL: integrating conjugative element protein PilL, PFGI-1 class 24 125 2.8E-23 T 01-11-2018 IPR022260 Integrating conjugative element protein PilL, PFGI-1 CDA09_20455 950ddc652d8ddf80c5eadeb5301f6609 199 Pfam PF10975 Protein of unknown function (DUF2802) 125 190 2.0E-13 T 01-11-2018 IPR021244 Protein of unknown function DUF2802 CDA09_16400 738baf4935391e5dbfc028bc180e20c6 163 Pfam PF02674 Colicin V production protein 4 143 2.9E-32 T 01-11-2018 IPR003825 Colicin V production, CvpA GO:0009403|GO:0016020 CDA09_21580 90038623fcef8daa366fa96a2e68cffd 556 Pfam PF03109 ABC1 family 118 237 6.5E-31 T 01-11-2018 IPR004147 UbiB domain CDA09_21580 90038623fcef8daa366fa96a2e68cffd 556 SUPERFAMILY SSF56112 101 435 2.9E-27 T 01-11-2018 IPR011009 Protein kinase-like domain superfamily CDA09_12055 3e2afb1b021be7a5f33279f9f8b22429 118 Pfam PF04241 Protein of unknown function (DUF423) 19 101 1.6E-26 T 01-11-2018 IPR006696 Protein of unknown function DUF423 CDA09_01505 6d2142a19c53d906226460003ca685d0 489 Pfam PF01943 Polysaccharide biosynthesis protein 6 266 4.9E-8 T 01-11-2018 IPR002797 Polysaccharide biosynthesis protein GO:0016020 CDA09_22705 5eed17f69ff994976e312e6de17d436a 288 Pfam PF02653 Branched-chain amino acid transport system / permease component 10 277 5.7E-40 T 01-11-2018 IPR001851 ABC transporter, permease GO:0016020|GO:0022857|GO:0055085 CDA09_22165 752cfe3084e425eeaafb0f2e37163cbe 182 Pfam PF11358 Protein of unknown function (DUF3158) 15 167 1.4E-70 T 01-11-2018 IPR021502 Protein of unknown function DUF3158 CDA09_21295 d029d9f2858561f1aa8ce23f08f13755 263 Pfam PF12787 EcsC protein family 7 243 9.0E-46 T 01-11-2018 IPR024787 EcsC protein CDA09_18350 889017a16dbed79aac5e54bbb5f45b11 340 Pfam PF00953 Glycosyl transferase family 4 77 227 6.2E-31 T 01-11-2018 IPR000715 Glycosyl transferase, family 4 GO:0008963|GO:0016021 KEGG: 00550+2.7.8.13|MetaCyc: PWY-5265|MetaCyc: PWY-6470|MetaCyc: PWY-6471|Reactome: R-HSA-446193|Reactome: R-HSA-4549356 CDA09_22175 de536326d83aec4e6ed855323b605fd6 250 Pfam PF12872 OST-HTH/LOTUS domain 174 236 8.5E-8 T 01-11-2018 IPR025605 OST-HTH/LOTUS domain CDA09_14235 bcc6e7a3afca51843067c22facb3c55e 69 Pfam PF13986 Domain of unknown function (DUF4224) 2 44 9.1E-18 T 01-11-2018 IPR025319 Domain of unknown function DUF4224 CDA09_06160 a943d0fb1db35f2732abc55c26f6dbd4 121 Pfam PF12279 Protein of unknown function (DUF3619) 3 119 3.5E-27 T 01-11-2018 IPR022064 Protein of unknown function DUF3619 CDA09_12280 c7482fd43905e882d22f2e1e8a4d0890 64 Pfam PF04328 Selenoprotein, putative 5 64 2.1E-30 T 01-11-2018 IPR007423 Selenoprotein, putative CDA09_20895 1209d45c613d5a752d812b382d02e6dd 64 Pfam PF11146 Protein of unknown function (DUF2905) 3 63 8.5E-17 T 01-11-2018 IPR021320 Protein of unknown function DUF2905