locus-tag class description G3580_00005 PF11638 DnaA N-terminal domain G3580_00005 PF00308 Bacterial dnaA protein G3580_00005 PF08299 Bacterial dnaA protein helix-turn-helix G3580_00010 PF00712 DNA polymerase III beta subunit, N-terminal domain G3580_00010 PF02767 DNA polymerase III beta subunit, central domain G3580_00010 PF02768 DNA polymerase III beta subunit, C-terminal domain G3580_00015 PF01751 Toprim domain G3580_00015 PF18053 DNA gyrase B subunit insert domain G3580_00015 PF00986 DNA gyrase B subunit, carboxyl terminus G3580_00015 PF00204 DNA gyrase B G3580_00015 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase G3580_00040 PF02384 N-6 DNA Methylase G3580_00040 PF12161 HsdM N-terminal domain G3580_00055 PF00873 AcrB/AcrD/AcrF family G3580_00070 PF00266 Aminotransferase class-V G3580_00080 PF12706 Beta-lactamase superfamily domain G3580_00085 PF02082 Transcriptional regulator G3580_00090 PF01458 Uncharacterized protein family (UPF0051) G3580_00095 PF00005 ABC transporter G3580_00100 PF01458 Uncharacterized protein family (UPF0051) G3580_00110 PF01592 NifU-like N terminal domain G3580_00115 PF01883 Iron-sulfur cluster assembly protein G3580_00125 PF13426 PAS domain G3580_00125 PF02954 Bacterial regulatory protein, Fis family G3580_00125 PF00158 Sigma-54 interaction domain G3580_00130 PF16177 Acetyl-coenzyme A synthetase N-terminus G3580_00130 PF00501 AMP-binding enzyme G3580_00130 PF13193 AMP-binding enzyme C-terminal domain G3580_00135 PF00107 Zinc-binding dehydrogenase G3580_00135 PF08240 Alcohol dehydrogenase GroES-like domain G3580_00140 PF08882 Acetone carboxylase gamma subunit G3580_00145 PF02538 Hydantoinase B/oxoprolinase G3580_00150 PF01968 Hydantoinase/oxoprolinase G3580_00150 PF05378 Hydantoinase/oxoprolinase N-terminal region G3580_00165 PF06463 Molybdenum Cofactor Synthesis C G3580_00165 PF04055 Radical SAM superfamily G3580_00170 PF08992 Quinohemoprotein amine dehydrogenase, gamma subunit G3580_00180 PF00664 ABC transporter transmembrane region G3580_00180 PF00005 ABC transporter G3580_00185 PF00082 Subtilase family G3580_00205 PF01063 Amino-transferase class IV G3580_00210 PF03466 LysR substrate binding domain G3580_00210 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family G3580_00230 PF02436 Conserved carboxylase domain G3580_00230 PF00682 HMGL-like G3580_00230 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain G3580_00230 PF00289 Biotin carboxylase, N-terminal domain G3580_00230 PF02785 Biotin carboxylase C-terminal domain G3580_00230 PF00364 Biotin-requiring enzyme G3580_00235 PF03328 HpcH/HpaI aldolase/citrate lyase family G3580_00240 PF00724 NADH:flavin oxidoreductase / NADH oxidase family G3580_00250 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family G3580_00250 PF03466 LysR substrate binding domain G3580_00265 PF01551 Peptidase family M23 G3580_00265 PF10145 Phage-related minor tail protein G3580_00265 PF01464 Transglycosylase SLT domain G3580_00280 PF08334 Type II secretion system (T2SS), protein G G3580_00280 PF07963 Prokaryotic N-terminal methylation motif G3580_00285 PF00482 Type II secretion system (T2SS), protein F G3580_00290 PF00437 Type II/IV secretion system protein G3580_00315 PF00263 Bacterial type II and III secretion system protein G3580_00315 PF03958 Bacterial type II/III secretion system short domain G3580_00320 PF08334 Type II secretion system (T2SS), protein G G3580_00320 PF07963 Prokaryotic N-terminal methylation motif G3580_00325 PF07963 Prokaryotic N-terminal methylation motif G3580_00325 PF08334 Type II secretion system (T2SS), protein G G3580_00340 PF00196 Bacterial regulatory proteins, luxR family G3580_00340 PF03472 Autoinducer binding domain G3580_00365 PF01618 MotA/TolQ/ExbB proton channel family G3580_00370 PF02472 Biopolymer transport protein ExbD/TolR G3580_00375 PF02472 Biopolymer transport protein ExbD/TolR G3580_00395 PF00355 Rieske [2Fe-2S] domain G3580_00400 PF00175 Oxidoreductase NAD-binding domain G3580_00400 PF00111 2Fe-2S iron-sulfur cluster binding domain G3580_00405 PF02830 V4R domain G3580_00405 PF00158 Sigma-54 interaction domain G3580_00405 PF06505 Activator of aromatic catabolism G3580_00405 PF02954 Bacterial regulatory protein, Fis family G3580_00410 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family G3580_00410 PF03466 LysR substrate binding domain G3580_00415 PF06505 Activator of aromatic catabolism G3580_00415 PF02830 V4R domain G3580_00415 PF02954 Bacterial regulatory protein, Fis family G3580_00415 PF00158 Sigma-54 interaction domain G3580_00420 PF14552 Tautomerase enzyme G3580_00430 PF04072 Leucine carboxyl methyltransferase G3580_00445 PF00107 Zinc-binding dehydrogenase G3580_00445 PF08240 Alcohol dehydrogenase GroES-like domain G3580_00455 PF00111 2Fe-2S iron-sulfur cluster binding domain G3580_00460 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily G3580_00465 PF06099 Phenol hydroxylase subunit G3580_00470 PF02332 Methane/Phenol/Toluene Hydroxylase G3580_00475 PF02406 MmoB/DmpM family G3580_00480 PF02332 Methane/Phenol/Toluene Hydroxylase G3580_00480 PF04945 YHS domain G3580_00490 PF00111 2Fe-2S iron-sulfur cluster binding domain G3580_00490 PF00175 Oxidoreductase NAD-binding domain G3580_00490 PF00970 Oxidoreductase FAD-binding domain G3580_00510 PF00884 Sulfatase G3580_00520 PF02954 Bacterial regulatory protein, Fis family G3580_00520 PF00072 Response regulator receiver domain G3580_00520 PF00158 Sigma-54 interaction domain G3580_00525 PF00512 His Kinase A (phospho-acceptor) domain G3580_00525 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase G3580_00530 PF00171 Aldehyde dehydrogenase family G3580_00535 PF01557 Fumarylacetoacetate (FAA) hydrolase family G3580_00545 PF01118 Semialdehyde dehydrogenase, NAD binding domain G3580_00545 PF09290 Prokaryotic acetaldehyde dehydrogenase, dimerisation G3580_00550 PF00682 HMGL-like G3580_00550 PF07836 DmpG-like communication domain G3580_00555 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily G3580_00570 PF02525 Flavodoxin-like fold G3580_00580 PF03976 Polyphosphate kinase 2 (PPK2) G3580_00590 PF00106 short chain dehydrogenase G3580_00600 PF00501 AMP-binding enzyme G3580_00620 PF00512 His Kinase A (phospho-acceptor) domain G3580_00620 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase G3580_00625 PF02954 Bacterial regulatory protein, Fis family G3580_00625 PF00158 Sigma-54 interaction domain G3580_00625 PF00072 Response regulator receiver domain G3580_00630 PF00149 Calcineurin-like phosphoesterase G3580_00630 PF00565 Staphylococcal nuclease homologue G3580_00630 PF00746 LPXTG cell wall anchor motif G3580_00630 PF02872 5'-nucleotidase, C-terminal domain G3580_00635 PF11146 Protein of unknown function (DUF2905) G3580_00645 PF04717 Type VI secretion system, phage-baseplate injector G3580_00670 PF00982 Glycosyltransferase family 20 G3580_00670 PF05116 Sucrose-6F-phosphate phosphohydrolase G3580_00680 PF07670 Nucleoside recognition G3580_00680 PF07664 Ferrous iron transport protein B C terminus G3580_00680 PF02421 Ferrous iron transport protein B G3580_00680 PF17910 FeoB cytosolic helical domain G3580_00685 PF04023 FeoA domain G3580_00690 PF01139 tRNA-splicing ligase RtcB G3580_00700 PF01625 Peptide methionine sulfoxide reductase G3580_00715 PF08242 Methyltransferase domain G3580_00720 PF10634 Fe2+ transport protein G3580_00750 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family G3580_00750 PF03466 LysR substrate binding domain G3580_00770 PF00753 Metallo-beta-lactamase superfamily G3580_00780 PF01145 SPFH domain / Band 7 family G3580_00780 PF16200 C-terminal region of band_7 G3580_00795 PF01297 Zinc-uptake complex component A periplasmic G3580_00800 PF00950 ABC 3 transport family G3580_00805 PF00005 ABC transporter G3580_00845 PF07683 Cobalamin synthesis protein cobW C-terminal domain G3580_00845 PF02492 CobW/HypB/UreG, nucleotide-binding domain G3580_00870 PF00005 ABC transporter G3580_00870 PF17755 UvrA DNA-binding domain G3580_00870 PF17760 UvrA interaction domain G3580_00880 PF13180 PDZ domain G3580_00885 PF03466 LysR substrate binding domain G3580_00885 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family G3580_00890 PF00210 Ferritin-like domain G3580_00900 PF01131 DNA topoisomerase G3580_00900 PF01751 Toprim domain G3580_00905 PF04361 Protein of unknown function (DUF494) G3580_00910 PF17782 DprA winged helix domain G3580_00910 PF02481 DNA recombination-mediator protein A G3580_00915 PF01476 LysM domain G3580_00920 PF01327 Polypeptide deformylase G3580_00925 PF00551 Formyl transferase G3580_00925 PF02911 Formyl transferase, C-terminal domain G3580_00930 PF01435 Peptidase family M48 G3580_00935 PF00158 Sigma-54 interaction domain G3580_00935 PF02954 Bacterial regulatory protein, Fis family G3580_00935 PF00072 Response regulator receiver domain G3580_00940 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase G3580_00940 PF00512 His Kinase A (phospho-acceptor) domain G3580_00960 PF00384 Molybdopterin oxidoreductase G3580_00960 PF01568 Molydopterin dinucleotide binding domain G3580_00960 PF04879 Molybdopterin oxidoreductase Fe4S4 domain G3580_00965 PF13247 4Fe-4S dicluster domain G3580_00980 PF12804 MobA-like NTP transferase domain G3580_00985 PF02634 FdhD/NarQ family G3580_01000 PF00072 Response regulator receiver domain G3580_01005 PF13360 PQQ-like domain G3580_01005 PF13442 Cytochrome C oxidase, cbb3-type, subunit III G3580_01015 PF02627 Carboxymuconolactone decarboxylase family G3580_01020 PF12680 SnoaL-like domain G3580_01020 PF08281 Sigma-70, region 4 G3580_01020 PF04542 Sigma-70 region 2 G3580_01030 PF00296 Luciferase-like monooxygenase G3580_01035 PF03738 Glutathionylspermidine synthase preATP-grasp G3580_01035 PF05257 CHAP domain G3580_01040 PF03167 Uracil DNA glycosylase superfamily G3580_01060 PF08534 Redoxin G3580_01075 PF13932 GidA associated domain G3580_01075 PF01134 Glucose inhibited division protein A G3580_01080 PF02527 rRNA small subunit methyltransferase G G3580_01085 PF13614 AAA domain G3580_01090 PF02195 ParB-like nuclease domain G3580_01090 PF17762 HTH domain found in ParB protein G3580_01100 PF00119 ATP synthase A chain G3580_01105 PF00137 ATP synthase subunit C G3580_01110 PF00430 ATP synthase B/B' CF(0) G3580_01115 PF00213 ATP synthase delta (OSCP) subunit G3580_01120 PF00306 ATP synthase alpha/beta chain, C terminal domain G3580_01120 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain G3580_01120 PF02874 ATP synthase alpha/beta family, beta-barrel domain G3580_01125 PF00231 ATP synthase G3580_01130 PF02874 ATP synthase alpha/beta family, beta-barrel domain G3580_01130 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain G3580_01135 PF00401 ATP synthase, Delta/Epsilon chain, long alpha-helix domain G3580_01135 PF02823 ATP synthase, Delta/Epsilon chain, beta-sandwich domain G3580_01145 PF01209 ubiE/COQ5 methyltransferase family G3580_01155 PF00486 Transcriptional regulatory protein, C terminal G3580_01155 PF00072 Response regulator receiver domain G3580_01160 PF00989 PAS fold G3580_01160 PF00512 His Kinase A (phospho-acceptor) domain G3580_01160 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase G3580_01160 PF11808 Phosphate regulon sensor protein PhoR G3580_01175 PF13230 Glutamine amidotransferases class-II G3580_01190 PF02934 GatB/GatE catalytic domain G3580_01190 PF02637 GatB domain G3580_01200 PF01425 Amidase G3580_01205 PF02686 Glu-tRNAGln amidotransferase C subunit G3580_01225 PF03717 Penicillin-binding Protein dimerisation domain G3580_01225 PF00905 Penicillin binding protein transpeptidase domain G3580_01230 PF01098 Cell cycle protein G3580_01235 PF03330 Lytic transglycolase G3580_01235 PF05036 Sporulation related domain G3580_01240 PF00768 D-alanyl-D-alanine carboxypeptidase G3580_01240 PF07943 Penicillin-binding protein 5, C-terminal domain G3580_01245 PF01063 Amino-transferase class IV G3580_01250 PF04359 Protein of unknown function (DUF493) G3580_01255 PF03099 Biotin/lipoate A/B protein ligase family G3580_01260 PF16881 N-terminal domain of lipoyl synthase of Radical_SAM family G3580_01260 PF04055 Radical SAM superfamily G3580_01265 PF00593 TonB dependent receptor G3580_01265 PF07715 TonB-dependent Receptor Plug Domain G3580_01280 PF00072 Response regulator receiver domain G3580_01280 PF17149 Periplasmic sensor domain found in signal transduction proteins G3580_01280 PF00672 HAMP domain G3580_01280 PF01627 Hpt domain G3580_01280 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase G3580_01280 PF00512 His Kinase A (phospho-acceptor) domain G3580_01285 PF00072 Response regulator receiver domain G3580_01285 PF00990 Diguanylate cyclase, GGDEF domain G3580_01290 PF02954 Bacterial regulatory protein, Fis family G3580_01290 PF00158 Sigma-54 interaction domain G3580_01290 PF06505 Activator of aromatic catabolism G3580_01290 PF02830 V4R domain G3580_01295 PF02332 Methane/Phenol/Toluene Hydroxylase G3580_01300 PF02406 MmoB/DmpM family G3580_01305 PF02332 Methane/Phenol/Toluene Hydroxylase G3580_01305 PF04945 YHS domain G3580_01320 PF13361 UvrD-like helicase C-terminal domain G3580_01320 PF00580 UvrD/REP helicase N-terminal domain G3580_01330 PF13442 Cytochrome C oxidase, cbb3-type, subunit III G3580_01345 PF13442 Cytochrome C oxidase, cbb3-type, subunit III G3580_01345 PF13360 PQQ-like domain G3580_01350 PF00501 AMP-binding enzyme G3580_01350 PF13193 AMP-binding enzyme C-terminal domain G3580_01355 PF00108 Thiolase, N-terminal domain G3580_01355 PF02803 Thiolase, C-terminal domain G3580_01360 PF08447 PAS fold G3580_01365 PF01144 Coenzyme A transferase G3580_01370 PF01144 Coenzyme A transferase G3580_01380 PF03176 MMPL family G3580_01395 PF00158 Sigma-54 interaction domain G3580_01395 PF13426 PAS domain G3580_01395 PF02954 Bacterial regulatory protein, Fis family G3580_01400 PF05378 Hydantoinase/oxoprolinase N-terminal region G3580_01400 PF01968 Hydantoinase/oxoprolinase G3580_01405 PF08882 Acetone carboxylase gamma subunit G3580_01410 PF05378 Hydantoinase/oxoprolinase N-terminal region G3580_01410 PF01968 Hydantoinase/oxoprolinase G3580_01425 PF07683 Cobalamin synthesis protein cobW C-terminal domain G3580_01425 PF02492 CobW/HypB/UreG, nucleotide-binding domain G3580_01435 PF00743 Flavin-binding monooxygenase-like G3580_01440 PF00561 alpha/beta hydrolase fold G3580_01450 PF06481 COX Aromatic Rich Motif G3580_01450 PF00116 Cytochrome C oxidase subunit II, periplasmic domain G3580_01455 PF01544 CorA-like Mg2+ transporter protein G3580_01465 PF10938 YfdX protein G3580_01475 PF00072 Response regulator receiver domain G3580_01475 PF00158 Sigma-54 interaction domain G3580_01475 PF02954 Bacterial regulatory protein, Fis family G3580_01480 PF00512 His Kinase A (phospho-acceptor) domain G3580_01480 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase G3580_01490 PF00753 Metallo-beta-lactamase superfamily G3580_01495 PF00072 Response regulator receiver domain G3580_01495 PF00486 Transcriptional regulatory protein, C terminal G3580_01500 PF01741 Large-conductance mechanosensitive channel, MscL G3580_01510 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase G3580_01510 PF00512 His Kinase A (phospho-acceptor) domain G3580_01510 PF00672 HAMP domain G3580_01535 PF00497 Bacterial extracellular solute-binding proteins, family 3 G3580_01540 PF00528 Binding-protein-dependent transport system inner membrane component G3580_01545 PF00528 Binding-protein-dependent transport system inner membrane component G3580_01550 PF00005 ABC transporter G3580_01560 PF14815 NUDIX domain G3580_01560 PF00633 Helix-hairpin-helix motif G3580_01560 PF00730 HhH-GPD superfamily base excision DNA repair protein G3580_01585 PF00027 Cyclic nucleotide-binding domain G3580_01585 PF13545 Crp-like helix-turn-helix domain G3580_01590 PF01613 Flavin reductase like domain G3580_01600 PF05690 Thiazole biosynthesis protein ThiG G3580_01600 PF02597 ThiS family G3580_01605 PF05690 Thiazole biosynthesis protein ThiG G3580_01610 PF02390 Putative methyltransferase G3580_01615 PF01343 Peptidase family S49 G3580_01625 PF04055 Radical SAM superfamily G3580_01625 PF06969 HemN C-terminal domain G3580_01630 PF01725 Ham1 family G3580_01635 PF01138 3' exoribonuclease family, domain 1 G3580_01635 PF03725 3' exoribonuclease family, domain 2 G3580_01645 PF00069 Protein kinase domain G3580_01650 PF08340 Domain of unknown function (DUF1732) G3580_01650 PF03755 YicC-like family, N-terminal region G3580_01670 PF00156 Phosphoribosyl transferase domain G3580_01675 PF00925 GTP cyclohydrolase II G3580_01680 PF03060 Nitronate monooxygenase G3580_01690 PF00156 Phosphoribosyl transferase domain G3580_01705 PF02146 Sir2 family G3580_01720 PF12034 Domain of unknown function (DUF3520) G3580_01720 PF00092 von Willebrand factor type A domain G3580_01720 PF12450 von Willebrand factor G3580_01745 PF04820 Tryptophan halogenase G3580_01790 PF02801 Beta-ketoacyl synthase, C-terminal domain G3580_01790 PF00109 Beta-ketoacyl synthase, N-terminal domain G3580_01800 PF01522 Polysaccharide deacetylase G3580_01840 PF02801 Beta-ketoacyl synthase, C-terminal domain G3580_01840 PF00109 Beta-ketoacyl synthase, N-terminal domain G3580_01845 PF00550 Phosphopantetheine attachment site G3580_01850 PF00990 Diguanylate cyclase, GGDEF domain G3580_01850 PF00563 EAL domain G3580_01850 PF03707 Bacterial signalling protein N terminal repeat G3580_01860 PF00593 TonB dependent receptor G3580_01860 PF07715 TonB-dependent Receptor Plug Domain G3580_01875 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain G3580_01875 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain G3580_01875 PF00205 Thiamine pyrophosphate enzyme, central domain G3580_01885 PF01042 Endoribonuclease L-PSP G3580_01910 PF09335 SNARE associated Golgi protein G3580_01915 PF00585 C-terminal regulatory domain of Threonine dehydratase G3580_01915 PF00291 Pyridoxal-phosphate dependent enzyme G3580_01935 PF01812 5-formyltetrahydrofolate cyclo-ligase family G3580_01940 PF01464 Transglycosylase SLT domain G3580_01940 PF14718 Soluble lytic murein transglycosylase L domain G3580_01950 PF01966 HD domain G3580_01950 PF12627 Probable RNA and SrmB- binding site of polymerase A G3580_01950 PF01743 Poly A polymerase head domain G3580_01955 PF00912 Transglycosylase G3580_01985 PF01171 PP-loop family G3580_02000 PF07475 HPr Serine kinase C-terminal domain G3580_02000 PF02603 HPr Serine kinase N terminus G3580_02005 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 G3580_02010 PF02482 Sigma 54 modulation protein / S30EA ribosomal protein G3580_02015 PF00309 Sigma-54 factor, Activator interacting domain (AID) G3580_02015 PF04963 Sigma-54 factor, core binding domain G3580_02015 PF04552 Sigma-54, DNA binding domain G3580_02020 PF12399 Branched-chain amino acid ATP-binding cassette transporter G3580_02020 PF00005 ABC transporter G3580_02025 PF02631 RecX family G3580_02030 PF00154 recA bacterial DNA recombination protein G3580_02035 PF02464 Competence-damaged protein G3580_02040 PF04608 Phosphatidylglycerophosphatase A G3580_02045 PF00586 AIR synthase related protein, N-terminal domain G3580_02045 PF02769 AIR synthase related protein, C-terminal domain G3580_02050 PF13537 Glutamine amidotransferase domain G3580_02050 PF00733 Asparagine synthase G3580_02055 PF08245 Mur ligase middle domain G3580_02055 PF08443 RimK-like ATP-grasp domain G3580_02055 PF02875 Mur ligase family, glutamate ligase domain G3580_02060 PF05343 M42 glutamyl aminopeptidase G3580_02070 PF01029 NusB family G3580_02075 PF00885 6,7-dimethyl-8-ribityllumazine synthase G3580_02080 PF00925 GTP cyclohydrolase II G3580_02080 PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase G3580_02085 PF00677 Lumazine binding domain G3580_02095 PF01161 Phosphatidylethanolamine-binding protein G3580_02100 PF02683 Cytochrome C biogenesis protein transmembrane region G3580_02100 PF11412 Disulphide bond corrector protein DsbC G3580_02105 PF03091 CutA1 divalent ion tolerance protein G3580_02110 PF01061 ABC-2 type transporter G3580_02115 PF14819 Nitrile reductase, 7-cyano-7-deazaguanine-reductase N-term G3580_02115 PF14489 QueF-like protein G3580_02130 PF00005 ABC transporter G3580_02135 PF00043 Glutathione S-transferase, C-terminal domain G3580_02135 PF13417 Glutathione S-transferase, N-terminal domain G3580_02140 PF12697 Alpha/beta hydrolase family G3580_02155 PF02036 SCP-2 sterol transfer family G3580_02160 PF01136 Peptidase family U32 G3580_02165 PF01136 Peptidase family U32 G3580_02170 PF00474 Sodium:solute symporter family G3580_02175 PF03109 ABC1 family G3580_02195 PF00750 tRNA synthetases class I (R) G3580_02195 PF05746 DALR anticodon binding domain G3580_02195 PF03485 Arginyl tRNA synthetase N terminal domain G3580_02205 PF13462 Thioredoxin G3580_02210 PF00106 short chain dehydrogenase G3580_02230 PF01497 Periplasmic binding protein G3580_02240 PF07167 Poly-beta-hydroxybutyrate polymerase (PhaC) N-terminus G3580_02240 PF00561 alpha/beta hydrolase fold G3580_02250 PF09278 MerR, DNA binding G3580_02250 PF00376 MerR family regulatory protein G3580_02260 PF02770 Acyl-CoA dehydrogenase, middle domain G3580_02260 PF02771 Acyl-CoA dehydrogenase, N-terminal domain G3580_02260 PF00441 Acyl-CoA dehydrogenase, C-terminal domain G3580_02265 PF00484 Carbonic anhydrase G3580_02270 PF00108 Thiolase, N-terminal domain G3580_02270 PF02803 Thiolase, C-terminal domain G3580_02275 PF02771 Acyl-CoA dehydrogenase, N-terminal domain G3580_02275 PF02770 Acyl-CoA dehydrogenase, middle domain G3580_02275 PF00441 Acyl-CoA dehydrogenase, C-terminal domain G3580_02290 PF03641 Possible lysine decarboxylase G3580_02295 PF01039 Carboxyl transferase domain G3580_02305 PF00378 Enoyl-CoA hydratase/isomerase G3580_02310 PF00289 Biotin carboxylase, N-terminal domain G3580_02310 PF00364 Biotin-requiring enzyme G3580_02310 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain G3580_02310 PF02785 Biotin carboxylase C-terminal domain G3580_02315 PF13193 AMP-binding enzyme C-terminal domain G3580_02315 PF00501 AMP-binding enzyme G3580_02320 PF00682 HMGL-like G3580_02335 PF00753 Metallo-beta-lactamase superfamily G3580_02335 PF16123 Hydroxyacylglutathione hydrolase C-terminus G3580_02350 PF16655 PhoD-like phosphatase, N-terminal domain G3580_02350 PF09423 PhoD-like phosphatase G3580_02355 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component G3580_02365 PF03480 Bacterial extracellular solute-binding protein, family 7 G3580_02370 PF03668 P-loop ATPase protein family G3580_02390 PF01738 Dienelactone hydrolase family G3580_02395 PF04303 PrpF protein G3580_02400 PF00689 Cation transporting ATPase, C-terminus G3580_02400 PF00690 Cation transporter/ATPase, N-terminus G3580_02405 PF02560 Cyanate lyase C-terminal domain G3580_02410 PF05199 GMC oxidoreductase G3580_02410 PF00732 GMC oxidoreductase G3580_02415 PF00171 Aldehyde dehydrogenase family G3580_02420 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family G3580_02425 PF17149 Periplasmic sensor domain found in signal transduction proteins G3580_02425 PF00672 HAMP domain G3580_02425 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase G3580_02425 PF01627 Hpt domain G3580_02425 PF00072 Response regulator receiver domain G3580_02425 PF00512 His Kinase A (phospho-acceptor) domain G3580_02430 PF02678 Pirin G3580_02430 PF05726 Pirin C-terminal cupin domain G3580_02435 PF00141 Peroxidase G3580_02440 PF01169 Uncharacterized protein family UPF0016 G3580_02445 PF00440 Bacterial regulatory proteins, tetR family G3580_02445 PF17925 Tetracyclin repressor-like, C-terminal domain G3580_02450 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion G3580_02455 PF00005 ABC transporter G3580_02495 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase G3580_02495 PF01346 Domain amino terminal to FKBP-type peptidyl-prolyl isomerase G3580_02500 PF16925 Tetracyclin repressor-like, C-terminal domain G3580_02500 PF00440 Bacterial regulatory proteins, tetR family G3580_02505 PF08240 Alcohol dehydrogenase GroES-like domain G3580_02505 PF00107 Zinc-binding dehydrogenase G3580_02515 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family G3580_02515 PF03466 LysR substrate binding domain G3580_02530 PF02589 LUD domain G3580_02535 PF11870 Domain of unknown function (DUF3390) G3580_02535 PF13183 4Fe-4S dicluster domain G3580_02535 PF02589 LUD domain G3580_02540 PF02754 Cysteine-rich domain G3580_02545 PF02075 Crossover junction endodeoxyribonuclease RuvC G3580_02555 PF01906 Putative heavy-metal-binding G3580_02565 PF00892 EamA-like transporter family G3580_02570 PF13473 Cupredoxin-like domain G3580_02575 PF03239 Iron permease FTR1 family G3580_02585 PF00438 S-adenosylmethionine synthetase, N-terminal domain G3580_02585 PF02772 S-adenosylmethionine synthetase, central domain G3580_02585 PF02773 S-adenosylmethionine synthetase, C-terminal domain G3580_02595 PF03279 Bacterial lipid A biosynthesis acyltransferase G3580_02605 PF01678 Diaminopimelate epimerase G3580_02615 PF00589 Phage integrase family G3580_02615 PF02899 Phage integrase, N-terminal SAM-like domain G3580_02625 PF10672 S-adenosylmethionine-dependent methyltransferase G3580_02625 PF17785 PUA-like domain G3580_02665 PF05491 RuvB C-terminal winged helix domain G3580_02665 PF05496 Holliday junction DNA helicase RuvB P-loop domain G3580_02665 PF17864 RuvB AAA lid domain G3580_02670 PF07499 RuvA, C-terminal domain G3580_02670 PF01330 RuvA N terminal domain G3580_02685 PF13419 Haloacid dehalogenase-like hydrolase G3580_02695 PF00575 S1 RNA binding domain G3580_02695 PF10150 Ribonuclease E/G family G3580_02700 PF02545 Maf-like protein G3580_02705 PF02590 Predicted SPOUT methyltransferase G3580_02715 PF01467 Cytidylyltransferase-like G3580_02730 PF01636 Phosphotransferase enzyme family G3580_02740 PF01590 GAF domain G3580_02740 PF00158 Sigma-54 interaction domain G3580_02740 PF02954 Bacterial regulatory protein, Fis family G3580_02750 PF13360 PQQ-like domain G3580_02775 PF01557 Fumarylacetoacetate (FAA) hydrolase family G3580_02780 PF03641 Possible lysine decarboxylase G3580_02785 PF01612 3'-5' exonuclease G3580_02785 PF01367 5'-3' exonuclease, C-terminal SAM fold G3580_02785 PF00476 DNA polymerase family A G3580_02785 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain G3580_02810 PF02308 MgtC family G3580_02815 PF03707 Bacterial signalling protein N terminal repeat G3580_02815 PF00990 Diguanylate cyclase, GGDEF domain G3580_02815 PF00563 EAL domain G3580_02820 PF00990 Diguanylate cyclase, GGDEF domain G3580_02820 PF00360 Phytochrome region G3580_02820 PF01590 GAF domain G3580_02820 PF00563 EAL domain G3580_02830 PF01068 ATP dependent DNA ligase domain G3580_02830 PF14743 DNA ligase OB-like domain G3580_02835 PF13406 Transglycosylase SLT domain G3580_02845 PF01522 Polysaccharide deacetylase G3580_02850 PF13439 Glycosyltransferase Family 4 G3580_02850 PF00534 Glycosyl transferases group 1 G3580_02855 PF00534 Glycosyl transferases group 1 G3580_02855 PF13439 Glycosyltransferase Family 4 G3580_02875 PF13439 Glycosyltransferase Family 4 G3580_02875 PF00534 Glycosyl transferases group 1 G3580_02880 PF00534 Glycosyl transferases group 1 G3580_02885 PF00534 Glycosyl transferases group 1 G3580_02885 PF13439 Glycosyltransferase Family 4 G3580_02895 PF00005 ABC transporter G3580_02895 PF00664 ABC transporter transmembrane region G3580_02905 PF00300 Histidine phosphatase superfamily (branch 1) G3580_02910 PF02654 Cobalamin-5-phosphate synthase G3580_02915 PF02277 Phosphoribosyltransferase G3580_02920 PF02283 Cobinamide kinase / cobinamide phosphate guanyltransferase G3580_02925 PF07715 TonB-dependent Receptor Plug Domain G3580_02925 PF00593 TonB dependent receptor G3580_02930 PF01032 FecCD transport family G3580_02935 PF00005 ABC transporter G3580_02945 PF02572 ATP:corrinoid adenosyltransferase BtuR/CobO/CobP G3580_02945 PF12557 Cob(I)alamin adenosyltransferase N terminal G3580_02950 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases G3580_02950 PF14824 Sirohaem biosynthesis protein central G3580_02950 PF10414 Sirohaem synthase dimerisation region G3580_02960 PF06508 Queuosine biosynthesis protein QueC G3580_02965 PF04055 Radical SAM superfamily G3580_02975 PF00691 OmpA family G3580_02980 PF04052 TolB amino-terminal domain G3580_02980 PF07676 WD40-like Beta Propeller Repeat G3580_02990 PF02472 Biopolymer transport protein ExbD/TolR G3580_02995 PF01618 MotA/TolQ/ExbB proton channel family G3580_03000 PF03061 Thioesterase superfamily G3580_03010 PF00227 Proteasome subunit G3580_03015 PF07724 AAA domain (Cdc48 subfamily) G3580_03015 PF00004 ATPase family associated with various cellular activities (AAA) G3580_03035 PF07992 Pyridine nucleotide-disulphide oxidoreductase G3580_03035 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain G3580_03040 PF05661 Protein of unknown function (DUF808) G3580_03050 PF01925 Sulfite exporter TauE/SafE G3580_03075 PF01037 Lrp/AsnC ligand binding domain G3580_03075 PF13404 AsnC-type helix-turn-helix domain G3580_03085 PF02423 Ornithine cyclodeaminase/mu-crystallin family G3580_03110 PF00009 Elongation factor Tu GTP binding domain G3580_03115 PF01507 Phosphoadenosine phosphosulfate reductase family G3580_03120 PF01507 Phosphoadenosine phosphosulfate reductase family G3580_03130 PF01077 Nitrite and sulphite reductase 4Fe-4S domain G3580_03130 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain G3580_03135 PF01925 Sulfite exporter TauE/SafE G3580_03140 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family G3580_03140 PF03466 LysR substrate binding domain G3580_03145 PF17763 Glutaminase/Asparaginase C-terminal domain G3580_03145 PF00710 Asparaginase, N-terminal G3580_03150 PF00497 Bacterial extracellular solute-binding proteins, family 3 G3580_03165 PF00005 ABC transporter G3580_03165 PF00664 ABC transporter transmembrane region G3580_03175 PF09997 Predicted membrane protein (DUF2238) G3580_03180 PF00672 HAMP domain G3580_03180 PF16527 Two-component sensor protein CpxA, periplasmic domain G3580_03180 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase G3580_03180 PF00512 His Kinase A (phospho-acceptor) domain G3580_03185 PF00072 Response regulator receiver domain G3580_03185 PF00486 Transcriptional regulatory protein, C terminal G3580_03200 PF09317 Domain of unknown function (DUF1974) G3580_03200 PF00441 Acyl-CoA dehydrogenase, C-terminal domain G3580_03200 PF02771 Acyl-CoA dehydrogenase, N-terminal domain G3580_03205 PF02803 Thiolase, C-terminal domain G3580_03205 PF00108 Thiolase, N-terminal domain G3580_03215 PF00378 Enoyl-CoA hydratase/isomerase G3580_03215 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain G3580_03215 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain G3580_03220 PF03061 Thioesterase superfamily G3580_03225 PF03349 Outer membrane protein transport protein (OMPP1/FadL/TodX) G3580_03230 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain G3580_03230 PF00378 Enoyl-CoA hydratase/isomerase G3580_03230 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain G3580_03235 PF02803 Thiolase, C-terminal domain G3580_03235 PF00108 Thiolase, N-terminal domain G3580_03240 PF00563 EAL domain G3580_03240 PF03707 Bacterial signalling protein N terminal repeat G3580_03240 PF00990 Diguanylate cyclase, GGDEF domain G3580_03245 PF00563 EAL domain G3580_03245 PF03707 Bacterial signalling protein N terminal repeat G3580_03245 PF00990 Diguanylate cyclase, GGDEF domain G3580_03260 PF00378 Enoyl-CoA hydratase/isomerase G3580_03265 PF00072 Response regulator receiver domain G3580_03275 PF00501 AMP-binding enzyme G3580_03275 PF01553 Acyltransferase G3580_03280 PF07690 Major Facilitator Superfamily G3580_03300 PF01053 Cys/Met metabolism PLP-dependent enzyme G3580_03315 PF02623 FliW protein G3580_03320 PF01042 Endoribonuclease L-PSP G3580_03325 PF17191 RecG wedge domain G3580_03325 PF00271 Helicase conserved C-terminal domain G3580_03325 PF00270 DEAD/DEAH box helicase G3580_03330 PF04345 Chorismate lyase G3580_03335 PF01040 UbiA prenyltransferase family G3580_03345 PF01977 3-octaprenyl-4-hydroxybenzoate carboxy-lyase G3580_03355 PF17746 SfsA N-terminal OB domain G3580_03355 PF03749 Sugar fermentation stimulation protein RE domain G3580_03360 PF02113 D-Ala-D-Ala carboxypeptidase 3 (S13) family G3580_03365 PF10145 Phage-related minor tail protein G3580_03365 PF01464 Transglycosylase SLT domain G3580_03365 PF01551 Peptidase family M23 G3580_03370 PF02397 Bacterial sugar transferase G3580_03390 PF02563 Polysaccharide biosynthesis/export protein G3580_03390 PF18412 Outer-membrane lipoprotein Wza C-terminal domain G3580_03390 PF10531 SLBB domain G3580_03400 PF13614 AAA domain G3580_03400 PF13807 G-rich domain on putative tyrosine kinase G3580_03400 PF02706 Chain length determinant protein G3580_03405 PF09721 Transmembrane exosortase (Exosortase_EpsH) G3580_03420 PF13439 Glycosyltransferase Family 4 G3580_03420 PF00534 Glycosyl transferases group 1 G3580_03425 PF00535 Glycosyl transferase family 2 G3580_03470 PF00483 Nucleotidyl transferase G3580_03475 PF16363 GDP-mannose 4,6 dehydratase G3580_03480 PF00483 Nucleotidyl transferase G3580_03485 PF00908 dTDP-4-dehydrorhamnose 3,5-epimerase G3580_03490 PF04321 RmlD substrate binding domain G3580_03505 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain G3580_03505 PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain G3580_03515 PF01491 Frataxin-like domain G3580_03520 PF00905 Penicillin binding protein transpeptidase domain G3580_03520 PF00912 Transglycosylase G3580_03520 PF17092 Penicillin-binding protein OB-like domain G3580_03545 PF07660 Secretin and TonB N terminus short domain G3580_03545 PF03958 Bacterial type II/III secretion system short domain G3580_03545 PF00263 Bacterial type II and III secretion system protein G3580_03545 PF11741 AMIN domain G3580_03550 PF01202 Shikimate kinase G3580_03555 PF01761 3-dehydroquinate synthase G3580_03560 PF01966 HD domain G3580_03560 PF13286 Phosphohydrolase-associated domain G3580_03565 PF00310 Glutamine amidotransferases class-II G3580_03565 PF04898 Glutamate synthase central domain G3580_03565 PF01645 Conserved region in glutamate synthase G3580_03565 PF01493 GXGXG motif G3580_03570 PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster G3580_03570 PF07992 Pyridine nucleotide-disulphide oxidoreductase G3580_03575 PF00871 Acetokinase family G3580_03580 PF01515 Phosphate acetyl/butaryl transferase G3580_03585 PF12804 MobA-like NTP transferase domain G3580_03585 PF00132 Bacterial transferase hexapeptide (six repeats) G3580_03590 PF01380 SIS domain G3580_03600 PF00156 Phosphoribosyl transferase domain G3580_03600 PF01738 Dienelactone hydrolase family G3580_03605 PF00072 Response regulator receiver domain G3580_03610 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain G3580_03610 PF00672 HAMP domain G3580_03620 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase G3580_03620 PF01584 CheW-like domain G3580_03620 PF02895 Signal transducing histidine kinase, homodimeric domain G3580_03620 PF07194 P2 response regulator binding domain G3580_03620 PF01627 Hpt domain G3580_03625 PF00672 HAMP domain G3580_03625 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain G3580_03625 PF02203 Tar ligand binding domain homologue G3580_03630 PF01584 CheW-like domain G3580_03635 PF01739 CheR methyltransferase, SAM binding domain G3580_03635 PF03705 CheR methyltransferase, all-alpha domain G3580_03640 PF01339 CheB methylesterase G3580_03640 PF00072 Response regulator receiver domain G3580_03645 PF03975 CheD chemotactic sensory transduction G3580_03650 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase G3580_03650 PF00512 His Kinase A (phospho-acceptor) domain G3580_03650 PF00989 PAS fold G3580_03655 PF00072 Response regulator receiver domain G3580_03655 PF00196 Bacterial regulatory proteins, luxR family G3580_03665 PF07167 Poly-beta-hydroxybutyrate polymerase (PhaC) N-terminus G3580_03670 PF00196 Bacterial regulatory proteins, luxR family G3580_03670 PF00072 Response regulator receiver domain G3580_03675 PF00989 PAS fold G3580_03675 PF00512 His Kinase A (phospho-acceptor) domain G3580_03675 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase G3580_03680 PF00027 Cyclic nucleotide-binding domain G3580_03680 PF13545 Crp-like helix-turn-helix domain G3580_03685 PF00563 EAL domain G3580_03685 PF00990 Diguanylate cyclase, GGDEF domain G3580_03685 PF03707 Bacterial signalling protein N terminal repeat G3580_03725 PF00072 Response regulator receiver domain G3580_03725 PF00158 Sigma-54 interaction domain G3580_03725 PF02954 Bacterial regulatory protein, Fis family G3580_03730 PF03734 L,D-transpeptidase catalytic domain G3580_03735 PF05951 Bacterial protein of unknown function (DUF882) G3580_03750 PF01027 Inhibitor of apoptosis-promoting Bax1 G3580_03755 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family G3580_03755 PF03466 LysR substrate binding domain G3580_03760 PF01261 Xylose isomerase-like TIM barrel G3580_03770 PF00873 AcrB/AcrD/AcrF family G3580_03820 PF02472 Biopolymer transport protein ExbD/TolR G3580_03825 PF01618 MotA/TolQ/ExbB proton channel family G3580_03830 PF03544 Gram-negative bacterial TonB protein C-terminal G3580_03835 PF00210 Ferritin-like domain G3580_03840 PF04324 BFD-like [2Fe-2S] binding domain G3580_03850 PF01557 Fumarylacetoacetate (FAA) hydrolase family G3580_03860 PF01790 Prolipoprotein diacylglyceryl transferase G3580_03865 PF04337 Protein of unknown function, DUF480 G3580_03870 PF00342 Phosphoglucose isomerase G3580_03875 PF00920 Dehydratase family G3580_03885 PF02798 Glutathione S-transferase, N-terminal domain G3580_03885 PF00043 Glutathione S-transferase, C-terminal domain G3580_03895 PF14720 NiFe/NiFeSe hydrogenase small subunit C-terminal G3580_03895 PF01058 NADH ubiquinone oxidoreductase, 20 Kd subunit G3580_03905 PF01292 Prokaryotic cytochrome b561 G3580_03925 PF01750 Hydrogenase maturation protease G3580_03930 PF01455 HupF/HypC family G3580_03935 PF07449 Hydrogenase-1 expression protein HyaE G3580_03940 PF04809 HupH hydrogenase expression protein, C-terminal conserved region G3580_03945 PF00301 Rubredoxin G3580_03950 PF00301 Rubredoxin G3580_03950 PF11939 [NiFe]-hydrogenase assembly, chaperone, HybE G3580_03960 PF01155 Hydrogenase/urease nickel incorporation, metallochaperone, hypA G3580_03965 PF02492 CobW/HypB/UreG, nucleotide-binding domain G3580_03970 PF01300 Telomere recombination G3580_03970 PF17788 HypF Kae1-like domain G3580_03970 PF00708 Acylphosphatase G3580_03970 PF07503 HypF finger G3580_03975 PF01455 HupF/HypC family G3580_03980 PF01924 Hydrogenase formation hypA family G3580_03990 PF00586 AIR synthase related protein, N-terminal domain G3580_03990 PF02769 AIR synthase related protein, C-terminal domain G3580_03995 PF00378 Enoyl-CoA hydratase/isomerase G3580_03995 PF00551 Formyl transferase G3580_03995 PF02911 Formyl transferase, C-terminal domain G3580_04000 PF00158 Sigma-54 interaction domain G3580_04000 PF02954 Bacterial regulatory protein, Fis family G3580_04000 PF00072 Response regulator receiver domain G3580_04005 PF01384 Phosphate transporter family G3580_04010 PF14720 NiFe/NiFeSe hydrogenase small subunit C-terminal G3580_04010 PF01058 NADH ubiquinone oxidoreductase, 20 Kd subunit G3580_04015 PF00374 Nickel-dependent hydrogenase G3580_04020 PF08447 PAS fold G3580_04020 PF08448 PAS fold G3580_04020 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase G3580_04025 PF04955 HupE / UreJ protein G3580_04030 PF00034 Cytochrome c G3580_04040 PF00563 EAL domain G3580_04040 PF00990 Diguanylate cyclase, GGDEF domain G3580_04040 PF03707 Bacterial signalling protein N terminal repeat G3580_04045 PF00512 His Kinase A (phospho-acceptor) domain G3580_04045 PF00989 PAS fold G3580_04045 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase G3580_04050 PF08668 HDOD domain G3580_04050 PF00563 EAL domain G3580_04055 PF00175 Oxidoreductase NAD-binding domain G3580_04055 PF00111 2Fe-2S iron-sulfur cluster binding domain G3580_04055 PF00970 Oxidoreductase FAD-binding domain G3580_04070 PF02926 THUMP domain G3580_04070 PF01170 Putative RNA methylase family UPF0020 G3580_04075 PF00437 Type II/IV secretion system protein G3580_04080 PF00437 Type II/IV secretion system protein G3580_04085 PF01168 Alanine racemase, N-terminal domain G3580_04090 PF14748 Pyrroline-5-carboxylate reductase dimerisation G3580_04090 PF03807 NADP oxidoreductase coenzyme F420-dependent G3580_04095 PF02325 YGGT family G3580_04100 PF02594 Uncharacterised ACR, YggU family COG1872 G3580_04105 PF01979 Amidohydrolase family G3580_04110 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain G3580_04110 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain G3580_04115 PF00156 Phosphoribosyl transferase domain G3580_04120 PF03652 Holliday junction resolvase G3580_04125 PF02622 Uncharacterized ACR, COG1678 G3580_04130 PF00875 DNA photolyase G3580_04130 PF03441 FAD binding domain of DNA photolyase G3580_04135 PF01627 Hpt domain G3580_04135 PF01584 CheW-like domain G3580_04135 PF02895 Signal transducing histidine kinase, homodimeric domain G3580_04135 PF00072 Response regulator receiver domain G3580_04135 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase G3580_04140 PF13675 Type IV pili methyl-accepting chemotaxis transducer N-term G3580_04140 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain G3580_04150 PF00072 Response regulator receiver domain G3580_04155 PF00072 Response regulator receiver domain G3580_04160 PF00301 Rubredoxin G3580_04170 PF02581 Thiamine monophosphate synthase G3580_04175 PF00202 Aminotransferase class-III G3580_04190 PF00571 CBS domain G3580_04190 PF03448 MgtE intracellular N domain G3580_04190 PF01769 Divalent cation transporter G3580_04195 PF00912 Transglycosylase G3580_04200 PF08501 Shikimate dehydrogenase substrate binding domain G3580_04200 PF01488 Shikimate / quinate 5-dehydrogenase G3580_04200 PF18317 Shikimate 5'-dehydrogenase C-terminal domain G3580_04210 PF00773 RNB domain G3580_04215 PF00892 EamA-like transporter family G3580_04220 PF01209 ubiE/COQ5 methyltransferase family G3580_04225 PF05728 Uncharacterised protein family (UPF0227) G3580_04230 PF02673 Bacitracin resistance protein BacA G3580_04270 PF07584 Aerotolerance regulator N-terminal G3580_04270 PF13519 von Willebrand factor type A domain G3580_04285 PF01882 Protein of unknown function DUF58 G3580_04290 PF07726 ATPase family associated with various cellular activities (AAA) G3580_04290 PF17863 AAA lid domain G3580_04305 PF00005 ABC transporter G3580_04320 PF01964 Radical SAM ThiC family G3580_04320 PF13667 ThiC-associated domain G3580_04325 PF13609 Gram-negative porin G3580_04330 PF13360 PQQ-like domain G3580_04350 PF13360 PQQ-like domain G3580_04350 PF13442 Cytochrome C oxidase, cbb3-type, subunit III G3580_04360 PF02954 Bacterial regulatory protein, Fis family G3580_04360 PF00158 Sigma-54 interaction domain G3580_04360 PF01590 GAF domain G3580_04365 PF01513 ATP-NAD kinase G3580_04370 PF00676 Dehydrogenase E1 component G3580_04375 PF02779 Transketolase, pyrimidine binding domain G3580_04375 PF02780 Transketolase, C-terminal domain G3580_04380 PF00364 Biotin-requiring enzyme G3580_04380 PF00561 alpha/beta hydrolase fold G3580_04385 PF04055 Radical SAM superfamily G3580_04390 PF02597 ThiS family G3580_04390 PF05690 Thiazole biosynthesis protein ThiG G3580_04400 PF05690 Thiazole biosynthesis protein ThiG G3580_04405 PF07992 Pyridine nucleotide-disulphide oxidoreductase G3580_04405 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain G3580_04410 PF02566 OsmC-like protein G3580_04425 PF00313 'Cold-shock' DNA-binding domain G3580_04435 PF13667 ThiC-associated domain G3580_04435 PF01964 Radical SAM ThiC family G3580_04440 PF00128 Alpha amylase, catalytic domain G3580_04445 PF08543 Phosphomethylpyrimidine kinase G3580_04450 PF00194 Eukaryotic-type carbonic anhydrase G3580_04455 PF00155 Aminotransferase class I and II G3580_04470 PF00440 Bacterial regulatory proteins, tetR family G3580_04470 PF08362 YcdC-like protein, C-terminal region G3580_04480 PF00873 AcrB/AcrD/AcrF family G3580_04490 PF01206 Sulfurtransferase TusA G3580_04490 PF00581 Rhodanese-like domain G3580_04495 PF02321 Outer membrane efflux protein G3580_04500 PF00534 Glycosyl transferases group 1 G3580_04500 PF04413 3-Deoxy-D-manno-octulosonic-acid transferase (kdotransferase) G3580_04505 PF01370 NAD dependent epimerase/dehydratase family G3580_04510 PF00005 ABC transporter G3580_04510 PF00664 ABC transporter transmembrane region G3580_04515 PF04321 RmlD substrate binding domain G3580_04520 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family G3580_04535 PF00106 short chain dehydrogenase G3580_04540 PF02348 Cytidylyltransferase G3580_04545 PF00202 Aminotransferase class-III G3580_04560 PF01370 NAD dependent epimerase/dehydratase family G3580_04580 PF03102 NeuB family G3580_04580 PF08666 SAF domain G3580_04595 PF01182 Glucosamine-6-phosphate isomerases/6-phosphogluconolactonase G3580_04600 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain G3580_04600 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain G3580_04605 PF01370 NAD dependent epimerase/dehydratase family G3580_04610 PF05050 Methyltransferase FkbM domain G3580_04625 PF08503 Tetrahydrodipicolinate succinyltransferase N-terminal G3580_04625 PF00132 Bacterial transferase hexapeptide (six repeats) G3580_04635 PF16363 GDP-mannose 4,6 dehydratase G3580_04640 PF02348 Cytidylyltransferase G3580_04655 PF16363 GDP-mannose 4,6 dehydratase G3580_04660 PF13439 Glycosyltransferase Family 4 G3580_04660 PF00534 Glycosyl transferases group 1 G3580_04695 PF02719 Polysaccharide biosynthesis protein G3580_04695 PF08485 Polysaccharide biosynthesis protein C-terminal G3580_04700 PF02350 UDP-N-acetylglucosamine 2-epimerase G3580_04705 PF01370 NAD dependent epimerase/dehydratase family G3580_04710 PF02397 Bacterial sugar transferase G3580_04720 PF00149 Calcineurin-like phosphoesterase G3580_04730 PF00765 Autoinducer synthase G3580_04735 PF13439 Glycosyltransferase Family 4 G3580_04735 PF00534 Glycosyl transferases group 1 G3580_04750 PF01219 Prokaryotic diacylglycerol kinase G3580_04775 PF00289 Biotin carboxylase, N-terminal domain G3580_04775 PF02785 Biotin carboxylase C-terminal domain G3580_04775 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain G3580_04780 PF00364 Biotin-requiring enzyme G3580_04785 PF01220 Dehydroquinase class II G3580_04790 PF00578 AhpC/TSA family G3580_04800 PF01225 Mur ligase family, catalytic domain G3580_04800 PF02875 Mur ligase family, glutamate ligase domain G3580_04800 PF08245 Mur ligase middle domain G3580_04810 PF13580 SIS domain G3580_04815 PF02021 Uncharacterised protein family UPF0102 G3580_04820 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases G3580_04825 PF01979 Amidohydrolase family G3580_04845 PF02381 MraZ protein, putative antitoxin-like G3580_04850 PF01795 MraW methylase family G3580_04860 PF00905 Penicillin binding protein transpeptidase domain G3580_04860 PF03717 Penicillin-binding Protein dimerisation domain G3580_04865 PF08245 Mur ligase middle domain G3580_04865 PF02875 Mur ligase family, glutamate ligase domain G3580_04865 PF01225 Mur ligase family, catalytic domain G3580_04870 PF08245 Mur ligase middle domain G3580_04870 PF02875 Mur ligase family, glutamate ligase domain G3580_04870 PF01225 Mur ligase family, catalytic domain G3580_04885 PF01098 Cell cycle protein G3580_04890 PF04101 Glycosyltransferase family 28 C-terminal domain G3580_04890 PF03033 Glycosyltransferase family 28 N-terminal domain G3580_04895 PF02875 Mur ligase family, glutamate ligase domain G3580_04895 PF01225 Mur ligase family, catalytic domain G3580_04895 PF08245 Mur ligase middle domain G3580_04900 PF07478 D-ala D-ala ligase C-terminus G3580_04900 PF01820 D-ala D-ala ligase N-terminus G3580_04905 PF03799 Cell division protein FtsQ G3580_04905 PF08478 POTRA domain, FtsQ-type G3580_04910 PF02491 SHS2 domain inserted in FTSA G3580_04915 PF00091 Tubulin/FtsZ family, GTPase domain G3580_04915 PF12327 FtsZ family, C-terminal domain G3580_04920 PF03331 UDP-3-O-acyl N-acetylglycosamine deacetylase G3580_04935 PF01043 SecA preprotein cross-linking domain G3580_04935 PF02810 SEC-C motif G3580_04935 PF07517 SecA DEAD-like domain G3580_04935 PF07516 SecA Wing and Scaffold domain G3580_04945 PF01960 ArgJ family G3580_04950 PF12727 PBP superfamily domain G3580_04980 PF00391 PEP-utilising enzyme, mobile domain G3580_04980 PF00668 Condensation domain G3580_04980 PF08241 Methyltransferase domain G3580_04980 PF00550 Phosphopantetheine attachment site G3580_04980 PF13193 AMP-binding enzyme C-terminal domain G3580_04980 PF00501 AMP-binding enzyme G3580_04980 PF00975 Thioesterase domain G3580_04985 PF04379 ApaG domain G3580_04990 PF00834 Ribulose-phosphate 3 epimerase family G3580_04995 PF13419 Haloacid dehalogenase-like hydrolase G3580_05000 PF04715 Anthranilate synthase component I, N terminal region G3580_05000 PF00425 chorismate binding enzyme G3580_05005 PF00202 Aminotransferase class-III G3580_05015 PF00117 Glutamine amidotransferase class-I G3580_05020 PF00591 Glycosyl transferase family, a/b domain G3580_05020 PF02885 Glycosyl transferase family, helical bundle domain G3580_05025 PF00218 Indole-3-glycerol phosphate synthase G3580_05040 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase G3580_05045 PF00375 Sodium:dicarboxylate symporter family G3580_05050 PF05088 Bacterial NAD-glutamate dehydrogenase G3580_05060 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily G3580_05065 PF09506 Glucosylglycerol-phosphate phosphatase (Salt_tol_Pase) G3580_05075 PF05199 GMC oxidoreductase G3580_05075 PF00732 GMC oxidoreductase G3580_05080 PF13419 Haloacid dehalogenase-like hydrolase G3580_05085 PF09382 RQC domain G3580_05085 PF00270 DEAD/DEAH box helicase G3580_05085 PF16124 RecQ zinc-binding G3580_05085 PF00271 Helicase conserved C-terminal domain G3580_05085 PF00570 HRDC domain G3580_05090 PF04480 Protein of unknown function (DUF559) G3580_05095 PF00291 Pyridoxal-phosphate dependent enzyme G3580_05100 PF00563 EAL domain G3580_05100 PF03707 Bacterial signalling protein N terminal repeat G3580_05100 PF00990 Diguanylate cyclase, GGDEF domain G3580_05105 PF01467 Cytidylyltransferase-like G3580_05120 PF00255 Glutathione peroxidase G3580_05155 PF00106 short chain dehydrogenase G3580_05165 PF02790 Cytochrome C oxidase subunit II, transmembrane domain G3580_05165 PF00116 Cytochrome C oxidase subunit II, periplasmic domain G3580_05170 PF00115 Cytochrome C and Quinol oxidase polypeptide I G3580_05175 PF04442 Cytochrome c oxidase assembly protein CtaG/Cox11 G3580_05185 PF00510 Cytochrome c oxidase subunit III G3580_05195 PF02104 SURF1 family G3580_05210 PF01040 UbiA prenyltransferase family G3580_05215 PF02630 SCO1/SenC G3580_05220 PF04542 Sigma-70 region 2 G3580_05220 PF04545 Sigma-70, region 4 G3580_05220 PF00140 Sigma-70 factor, region 1.2 G3580_05225 PF03412 Peptidase C39 family G3580_05225 PF00005 ABC transporter G3580_05225 PF00664 ABC transporter transmembrane region G3580_05230 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion G3580_05230 PF00529 HlyD membrane-fusion protein of T1SS G3580_05235 PF00072 Response regulator receiver domain G3580_05235 PF00196 Bacterial regulatory proteins, luxR family G3580_05260 PF02321 Outer membrane efflux protein G3580_05265 PF00206 Lyase G3580_05265 PF10415 Fumarase C C-terminus G3580_05275 PF04341 Protein of unknown function, DUF485 G3580_05280 PF00474 Sodium:solute symporter family G3580_05290 PF02882 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain G3580_05290 PF00763 Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain G3580_05295 PF01645 Conserved region in glutamate synthase G3580_05310 PF00120 Glutamine synthetase, catalytic domain G3580_05320 PF17806 Sarcosine oxidase A3 domain G3580_05320 PF07992 Pyridine nucleotide-disulphide oxidoreductase G3580_05320 PF08669 Glycine cleavage T-protein C-terminal barrel domain G3580_05320 PF01571 Aminomethyltransferase folate-binding domain G3580_05330 PF01266 FAD dependent oxidoreductase G3580_05335 PF00551 Formyl transferase G3580_05345 PF00909 Ammonium Transporter Family G3580_05350 PF00543 Nitrogen regulatory protein P-II G3580_05360 PF00166 Chaperonin 10 Kd subunit G3580_05365 PF00118 TCP-1/cpn60 chaperonin family G3580_05370 PF00486 Transcriptional regulatory protein, C terminal G3580_05370 PF00072 Response regulator receiver domain G3580_05375 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase G3580_05375 PF00512 His Kinase A (phospho-acceptor) domain G3580_05375 PF08521 Two-component sensor kinase N-terminal G3580_05385 PF00745 Glutamyl-tRNAGlu reductase, dimerisation domain G3580_05385 PF05201 Glutamyl-tRNAGlu reductase, N-terminal domain G3580_05385 PF01488 Shikimate / quinate 5-dehydrogenase G3580_05390 PF00472 RF-1 domain G3580_05390 PF03462 PCRF domain G3580_05395 PF05175 Methyltransferase small domain G3580_05395 PF17827 PrmC N-terminal domain G3580_05400 PF00462 Glutaredoxin G3580_05425 PF03881 Fructosamine kinase G3580_05430 PF00069 Protein kinase domain G3580_05430 PF03793 PASTA domain G3580_05435 PF14698 Argininosuccinate lyase C-terminal G3580_05435 PF00206 Lyase G3580_05440 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase G3580_05440 PF06580 Histidine kinase G3580_05440 PF07694 5TMR of 5TMR-LYT G3580_05445 PF00072 Response regulator receiver domain G3580_05445 PF04397 LytTr DNA-binding domain G3580_05455 PF00311 Phosphoenolpyruvate carboxylase G3580_05465 PF01379 Porphobilinogen deaminase, dipyromethane cofactor binding domain G3580_05465 PF03900 Porphobilinogen deaminase, C-terminal domain G3580_05470 PF02602 Uroporphyrinogen-III synthase HemD G3580_05475 PF04375 HemX, putative uroporphyrinogen-III C-methyltransferase G3580_05485 PF01218 Coproporphyrinogen III oxidase G3580_05495 PF02843 Phosphoribosylglycinamide synthetase, C domain G3580_05495 PF01071 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain G3580_05495 PF02844 Phosphoribosylglycinamide synthetase, N domain G3580_05500 PF02142 MGS-like domain G3580_05500 PF01808 AICARFT/IMPCHase bienzyme G3580_05505 PF02954 Bacterial regulatory protein, Fis family G3580_05510 PF01207 Dihydrouridine synthase (Dus) G3580_05515 PF01494 FAD binding domain G3580_05520 PF05195 Aminopeptidase P, N-terminal domain G3580_05520 PF00557 Metallopeptidase family M24 G3580_05525 PF00483 Nucleotidyl transferase G3580_05530 PF01636 Phosphotransferase enzyme family G3580_05535 PF03968 OstA-like protein G3580_05535 PF04453 LPS transport system D G3580_05540 PF00639 PPIC-type PPIASE domain G3580_05540 PF09312 SurA N-terminal domain G3580_05545 PF04166 Pyridoxal phosphate biosynthetic protein PdxA G3580_05550 PF00398 Ribosomal RNA adenine dimethylase G3580_05560 PF00672 HAMP domain G3580_05560 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain G3580_05560 PF02743 Cache domain G3580_05580 PF00563 EAL domain G3580_05580 PF00990 Diguanylate cyclase, GGDEF domain G3580_05580 PF03707 Bacterial signalling protein N terminal repeat G3580_05580 PF13188 PAS domain G3580_05585 PF01432 Peptidase family M3 G3580_05595 PF01259 SAICAR synthetase G3580_05605 PF03062 MBOAT, membrane-bound O-acyltransferase family G3580_05620 PF01116 Fructose-bisphosphate aldolase class-II G3580_05625 PF00881 Nitroreductase family G3580_05630 PF00224 Pyruvate kinase, barrel domain G3580_05630 PF02887 Pyruvate kinase, alpha/beta domain G3580_05635 PF00990 Diguanylate cyclase, GGDEF domain G3580_05635 PF17151 Periplasmic sensor domain G3580_05640 PF00162 Phosphoglycerate kinase G3580_05645 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain G3580_05645 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain G3580_05650 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain G3580_05650 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain G3580_05655 PF02779 Transketolase, pyrimidine binding domain G3580_05655 PF02780 Transketolase, C-terminal domain G3580_05655 PF00456 Transketolase, thiamine diphosphate binding domain G3580_05660 PF00485 Phosphoribulokinase / Uridine kinase family G3580_05665 PF00459 Inositol monophosphatase family G3580_05670 PF04452 RNA methyltransferase G3580_05675 PF03976 Polyphosphate kinase 2 (PPK2) G3580_05680 PF00696 Amino acid kinase family G3580_05680 PF00583 Acetyltransferase (GNAT) family G3580_05685 PF04362 Bacterial Fe(2+) trafficking G3580_05690 PF01895 PhoU domain G3580_05695 PF06026 Ribose 5-phosphate isomerase A (phosphoriboisomerase A) G3580_05705 PF00924 Mechanosensitive ion channel G3580_05710 PF00582 Universal stress protein family G3580_05715 PF00474 Sodium:solute symporter family G3580_05730 PF04172 LrgB-like family G3580_05735 PF03788 LrgA family G3580_05755 PF05567 Neisseria PilC beta-propeller domain G3580_05775 PF07963 Prokaryotic N-terminal methylation motif G3580_05775 PF00114 Pilin (bacterial filament) G3580_05785 PF00106 short chain dehydrogenase G3580_05800 PF00115 Cytochrome C and Quinol oxidase polypeptide I G3580_05815 PF14715 N-terminal domain of cytochrome oxidase-cbb3, FixP G3580_05815 PF13442 Cytochrome C oxidase, cbb3-type, subunit III G3580_05820 PF11614 IG-like fold at C-terminal of FixG, putative oxidoreductase G3580_05820 PF12801 4Fe-4S binding domain G3580_05820 PF13746 4Fe-4S dicluster domain G3580_05845 PF00561 alpha/beta hydrolase fold G3580_05845 PF07167 Poly-beta-hydroxybutyrate polymerase (PhaC) N-terminus G3580_05865 PF00027 Cyclic nucleotide-binding domain G3580_05865 PF13545 Crp-like helix-turn-helix domain G3580_05875 PF04247 Invasion gene expression up-regulator, SirB G3580_05885 PF13545 Crp-like helix-turn-helix domain G3580_05885 PF00027 Cyclic nucleotide-binding domain G3580_05890 PF04055 Radical SAM superfamily G3580_05890 PF06969 HemN C-terminal domain G3580_05900 PF00581 Rhodanese-like domain G3580_05905 PF09278 MerR, DNA binding G3580_05905 PF00376 MerR family regulatory protein G3580_05910 PF00403 Heavy-metal-associated domain G3580_05920 PF03707 Bacterial signalling protein N terminal repeat G3580_05920 PF00563 EAL domain G3580_05920 PF00990 Diguanylate cyclase, GGDEF domain G3580_05925 PF00719 Inorganic pyrophosphatase G3580_05935 PF00795 Carbon-nitrogen hydrolase G3580_05935 PF02540 NAD synthase G3580_05940 PF00543 Nitrogen regulatory protein P-II G3580_05945 PF01713 Smr domain G3580_05950 PF07992 Pyridine nucleotide-disulphide oxidoreductase G3580_05955 PF00027 Cyclic nucleotide-binding domain G3580_05955 PF13545 Crp-like helix-turn-helix domain G3580_05960 PF17854 FtsK alpha domain G3580_05960 PF13491 4TM region of DNA translocase FtsK/SpoIIIE G3580_05960 PF01580 FtsK/SpoIIIE family G3580_05960 PF09397 Ftsk gamma domain G3580_05965 PF03548 Outer membrane lipoprotein carrier protein LolA G3580_05970 PF00004 ATPase family associated with various cellular activities (AAA) G3580_05970 PF16193 AAA C-terminal domain G3580_05970 PF12002 MgsA AAA+ ATPase C terminal G3580_05980 PF02403 Seryl-tRNA synthetase N-terminal domain G3580_05980 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) G3580_05985 PF00497 Bacterial extracellular solute-binding proteins, family 3 G3580_05985 PF01464 Transglycosylase SLT domain G3580_06000 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase G3580_06000 PF00512 His Kinase A (phospho-acceptor) domain G3580_06005 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain G3580_06005 PF17200 Single Cache domain 2 G3580_06005 PF00672 HAMP domain G3580_06015 PF06779 Uncharacterised MFS-type transporter YbfB G3580_06020 PF00990 Diguanylate cyclase, GGDEF domain G3580_06020 PF00563 EAL domain G3580_06020 PF03707 Bacterial signalling protein N terminal repeat G3580_06025 PF01311 Bacterial export proteins, family 1 G3580_06030 PF01313 Bacterial export proteins, family 3 G3580_06035 PF00813 FliP family G3580_06040 PF04347 Flagellar biosynthesis protein, FliO G3580_06055 PF05114 Protein of unknown function (DUF692) G3580_06070 PF12794 Mechanosensitive ion channel inner membrane domain 1 G3580_06070 PF12795 Mechanosensitive ion channel porin domain G3580_06070 PF00924 Mechanosensitive ion channel G3580_06075 PF03649 Uncharacterised protein family (UPF0014) G3580_06080 PF00005 ABC transporter G3580_06080 PF08402 TOBE domain G3580_06100 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term G3580_06100 PF16973 Flagellar motor switch protein FliN N-terminal G3580_06105 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term G3580_06105 PF02154 Flagellar motor switch protein FliM G3580_06120 PF02050 Flagellar FliJ protein G3580_06125 PF18269 T3SS EscN ATPase C-terminal domain G3580_06125 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain G3580_06135 PF14842 FliG N-terminal domain G3580_06135 PF01706 FliG C-terminal domain G3580_06135 PF14841 FliG middle domain G3580_06140 PF01514 Secretory protein of YscJ/FliF family G3580_06140 PF08345 Flagellar M-ring protein C-terminal G3580_06145 PF00989 PAS fold G3580_06145 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase G3580_06145 PF00512 His Kinase A (phospho-acceptor) domain G3580_06150 PF00158 Sigma-54 interaction domain G3580_06150 PF00072 Response regulator receiver domain G3580_06150 PF02954 Bacterial regulatory protein, Fis family G3580_06155 PF02049 Flagellar hook-basal body complex protein FliE G3580_06170 PF03480 Bacterial extracellular solute-binding protein, family 7 G3580_06175 PF01523 Putative modulator of DNA gyrase G3580_06180 PF04751 Protein of unknown function (DUF615) G3580_06185 PF00994 Probable molybdopterin binding domain G3580_06190 PF01794 Ferric reductase like transmembrane component G3580_06195 PF00174 Oxidoreductase molybdopterin binding domain G3580_06200 PF00793 DAHP synthetase I family G3580_06215 PF01116 Fructose-bisphosphate aldolase class-II G3580_06220 PF02780 Transketolase, C-terminal domain G3580_06220 PF02779 Transketolase, pyrimidine binding domain G3580_06220 PF00456 Transketolase, thiamine diphosphate binding domain G3580_06225 PF00485 Phosphoribulokinase / Uridine kinase family G3580_06230 PF00316 Fructose-1-6-bisphosphatase, N-terminal domain G3580_06235 PF00004 ATPase family associated with various cellular activities (AAA) G3580_06235 PF17866 AAA lid domain G3580_06240 PF00101 Ribulose bisphosphate carboxylase, small chain G3580_06245 PF00016 Ribulose bisphosphate carboxylase large chain, catalytic domain G3580_06245 PF02788 Ribulose bisphosphate carboxylase large chain, N-terminal domain G3580_06250 PF03466 LysR substrate binding domain G3580_06250 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family G3580_06265 PF00133 tRNA synthetases class I (I, L, M and V) G3580_06265 PF08264 Anticodon-binding domain of tRNA G3580_06265 PF10458 Valyl tRNA synthetase tRNA binding arm G3580_06280 PF02789 Cytosol aminopeptidase family, N-terminal domain G3580_06280 PF00883 Cytosol aminopeptidase family, catalytic domain G3580_06285 PF03739 Lipopolysaccharide export system permease LptF/LptG G3580_06295 PF04349 Periplasmic glucan biosynthesis protein, MdoG G3580_06305 PF00535 Glycosyl transferase family 2 G3580_06310 PF01245 Ribosomal protein L19 G3580_06315 PF01746 tRNA (Guanine-1)-methyltransferase G3580_06320 PF01782 RimM N-terminal domain G3580_06320 PF05239 PRC-barrel domain G3580_06325 PF00886 Ribosomal protein S16 G3580_06330 PF00215 Orotidine 5'-phosphate decarboxylase / HUMPS family G3580_06340 PF03631 Virulence factor BrkB G3580_06345 PF03358 NADPH-dependent FMN reductase G3580_06355 PF08502 LeuA allosteric (dimerisation) domain G3580_06355 PF00682 HMGL-like G3580_06360 PF01066 CDP-alcohol phosphatidyltransferase G3580_06365 PF02666 Phosphatidylserine decarboxylase G3580_06370 PF01450 Acetohydroxy acid isomeroreductase, catalytic domain G3580_06370 PF07991 Acetohydroxy acid isomeroreductase, NADPH-binding domain G3580_06375 PF10369 Small subunit of acetolactate synthase G3580_06380 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain G3580_06380 PF00205 Thiamine pyrophosphate enzyme, central domain G3580_06380 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain G3580_06410 PF00005 ABC transporter G3580_06420 PF00528 Binding-protein-dependent transport system inner membrane component G3580_06435 PF17200 Single Cache domain 2 G3580_06435 PF07730 Histidine kinase G3580_06440 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain G3580_06440 PF00672 HAMP domain G3580_06450 PF00563 EAL domain G3580_06450 PF00990 Diguanylate cyclase, GGDEF domain G3580_06450 PF03707 Bacterial signalling protein N terminal repeat G3580_06455 PF07317 Flagellar regulator YcgR G3580_06455 PF07238 PilZ domain G3580_06460 PF01312 FlhB HrpN YscU SpaS Family G3580_06475 PF02561 Flagellar protein FliS G3580_06480 PF02465 Flagellar hook-associated protein 2 N-terminus G3580_06480 PF07195 Flagellar hook-associated protein 2 C-terminus G3580_06490 PF00700 Bacterial flagellin C-terminal helical region G3580_06490 PF00669 Bacterial flagellin N-terminal helical region G3580_06500 PF00535 Glycosyl transferase family 2 G3580_06510 PF04055 Radical SAM superfamily G3580_06510 PF06463 Molybdenum Cofactor Synthesis C G3580_06515 PF02310 B12 binding domain G3580_06515 PF04055 Radical SAM superfamily G3580_06530 PF01370 NAD dependent epimerase/dehydratase family G3580_06535 PF00908 dTDP-4-dehydrorhamnose 3,5-epimerase G3580_06540 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family G3580_06545 PF16363 GDP-mannose 4,6 dehydratase G3580_06550 PF00483 Nucleotidyl transferase G3580_06560 PF00072 Response regulator receiver domain G3580_06560 PF00990 Diguanylate cyclase, GGDEF domain G3580_06565 PF00072 Response regulator receiver domain G3580_06565 PF00196 Bacterial regulatory proteins, luxR family G3580_06570 PF17200 Single Cache domain 2 G3580_06570 PF07730 Histidine kinase G3580_06600 PF01527 Transposase G3580_06605 PF03060 Nitronate monooxygenase G3580_06610 PF03473 MOSC domain G3580_06610 PF03475 3-alpha domain G3580_06615 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family G3580_06615 PF03466 LysR substrate binding domain G3580_06635 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family G3580_06635 PF03466 LysR substrate binding domain G3580_06640 PF00106 short chain dehydrogenase G3580_06665 PF00474 Sodium:solute symporter family G3580_06670 PF03466 LysR substrate binding domain G3580_06670 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family G3580_06675 PF03466 LysR substrate binding domain G3580_06675 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family G3580_06690 PF03060 Nitronate monooxygenase G3580_06700 PF00474 Sodium:solute symporter family G3580_06705 PF04341 Protein of unknown function, DUF485 G3580_06710 PF02777 Iron/manganese superoxide dismutases, C-terminal domain G3580_06710 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain G3580_06715 PF00171 Aldehyde dehydrogenase family G3580_06725 PF00970 Oxidoreductase FAD-binding domain G3580_06725 PF00042 Globin G3580_06725 PF00175 Oxidoreductase NAD-binding domain G3580_06730 PF14552 Tautomerase enzyme G3580_06735 PF01012 Electron transfer flavoprotein domain G3580_06740 PF01012 Electron transfer flavoprotein domain G3580_06740 PF00766 Electron transfer flavoprotein FAD-binding domain G3580_06760 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase G3580_06760 PF07730 Histidine kinase G3580_06760 PF05231 MASE1 G3580_06765 PF00196 Bacterial regulatory proteins, luxR family G3580_06765 PF00072 Response regulator receiver domain G3580_06775 PF01053 Cys/Met metabolism PLP-dependent enzyme G3580_06780 PF00005 ABC transporter G3580_06780 PF00664 ABC transporter transmembrane region G3580_06805 PF13419 Haloacid dehalogenase-like hydrolase G3580_06815 PF00691 OmpA family G3580_06820 PF01979 Amidohydrolase family G3580_06825 PF03989 DNA gyrase C-terminal domain, beta-propeller G3580_06825 PF00521 DNA gyrase/topoisomerase IV, subunit A G3580_06830 PF00266 Aminotransferase class-V G3580_06835 PF01817 Chorismate mutase type II G3580_06835 PF01842 ACT domain G3580_06835 PF00800 Prephenate dehydratase G3580_06840 PF00155 Aminotransferase class I and II G3580_06845 PF02153 Prephenate dehydrogenase G3580_06845 PF01842 ACT domain G3580_06850 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) G3580_06855 PF00575 S1 RNA binding domain G3580_06860 PF00216 Bacterial DNA-binding protein G3580_06870 PF18073 Rubredoxin metal binding domain G3580_06875 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain G3580_06875 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain G3580_06875 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain G3580_06880 PF00294 pfkB family carbohydrate kinase G3580_06885 PF00291 Pyridoxal-phosphate dependent enzyme G3580_06920 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) G3580_06920 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain G3580_06920 PF02824 TGS domain G3580_06920 PF03129 Anticodon binding domain G3580_06925 PF05198 Translation initiation factor IF-3, N-terminal domain G3580_06925 PF00707 Translation initiation factor IF-3, C-terminal domain G3580_06930 PF01632 Ribosomal protein L35 G3580_06935 PF00453 Ribosomal protein L20 G3580_06940 PF01409 tRNA synthetases class II core domain (F) G3580_06940 PF02912 Aminoacyl tRNA synthetase class II, N-terminal domain G3580_06945 PF03483 B3/4 domain G3580_06945 PF03484 tRNA synthetase B5 domain G3580_06945 PF03147 Ferredoxin-fold anticodon binding domain G3580_06945 PF01588 Putative tRNA binding domain G3580_06945 PF17759 Phenylalanyl tRNA synthetase beta chain CLM domain G3580_06950 PF00216 Bacterial DNA-binding protein G3580_06985 PF07992 Pyridine nucleotide-disulphide oxidoreductase G3580_07005 PF02492 CobW/HypB/UreG, nucleotide-binding domain G3580_07010 PF01730 UreF G3580_07015 PF02814 UreE urease accessory protein, N-terminal domain G3580_07015 PF05194 UreE urease accessory protein, C-terminal domain G3580_07020 PF00449 Urease alpha-subunit, N-terminal domain G3580_07020 PF01979 Amidohydrolase family G3580_07025 PF00699 Urease beta subunit G3580_07030 PF00547 Urease, gamma subunit G3580_07035 PF01774 UreD urease accessory protein G3580_07040 PF03109 ABC1 family G3580_07055 PF00583 Acetyltransferase (GNAT) family G3580_07065 PF06751 Ethanolamine ammonia lyase large subunit (EutB) G3580_07070 PF05985 Ethanolamine ammonia-lyase light chain (EutC) G3580_07075 PF00005 ABC transporter G3580_07080 PF12399 Branched-chain amino acid ATP-binding cassette transporter G3580_07080 PF00005 ABC transporter G3580_07085 PF02653 Branched-chain amino acid transport system / permease component G3580_07090 PF02653 Branched-chain amino acid transport system / permease component G3580_07100 PF08447 PAS fold G3580_07100 PF13426 PAS domain G3580_07100 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain G3580_07135 PF13492 GAF domain G3580_07135 PF00512 His Kinase A (phospho-acceptor) domain G3580_07135 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase G3580_07135 PF13493 Domain of unknown function (DUF4118) G3580_07135 PF02702 Osmosensitive K+ channel His kinase sensor domain G3580_07140 PF00486 Transcriptional regulatory protein, C terminal G3580_07140 PF00072 Response regulator receiver domain G3580_07145 PF02386 Cation transport protein G3580_07150 PF00072 Response regulator receiver domain G3580_07155 PF01627 Hpt domain G3580_07155 PF00072 Response regulator receiver domain G3580_07155 PF00512 His Kinase A (phospho-acceptor) domain G3580_07155 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase G3580_07160 PF12849 PBP superfamily domain G3580_07165 PF00528 Binding-protein-dependent transport system inner membrane component G3580_07170 PF00528 Binding-protein-dependent transport system inner membrane component G3580_07175 PF00005 ABC transporter G3580_07230 PF10431 C-terminal, D2-small domain, of ClpB protein G3580_07230 PF17871 AAA lid domain G3580_07230 PF07724 AAA domain (Cdc48 subfamily) G3580_07230 PF00004 ATPase family associated with various cellular activities (AAA) G3580_07240 PF04717 Type VI secretion system, phage-baseplate injector G3580_07265 PF00512 His Kinase A (phospho-acceptor) domain G3580_07265 PF00672 HAMP domain G3580_07265 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase G3580_07270 PF01256 Carbohydrate kinase G3580_07270 PF03853 YjeF-related protein N-terminus G3580_07275 PF14720 NiFe/NiFeSe hydrogenase small subunit C-terminal G3580_07275 PF01058 NADH ubiquinone oxidoreductase, 20 Kd subunit G3580_07280 PF00374 Nickel-dependent hydrogenase G3580_07290 PF00512 His Kinase A (phospho-acceptor) domain G3580_07290 PF00989 PAS fold G3580_07290 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase G3580_07305 PF00850 Histone deacetylase domain G3580_07310 PF07759 Protein of unknown function (DUF1615) G3580_07315 PF01227 GTP cyclohydrolase I G3580_07335 PF00270 DEAD/DEAH box helicase G3580_07335 PF03880 DbpA RNA binding domain G3580_07335 PF00271 Helicase conserved C-terminal domain G3580_07345 PF00999 Sodium/hydrogen exchanger family G3580_07355 PF00593 TonB dependent receptor G3580_07355 PF07715 TonB-dependent Receptor Plug Domain G3580_07370 PF12592 Protein of unknown function (DUF3763) G3580_07370 PF17868 AAA lid domain G3580_07370 PF07728 AAA domain (dynein-related subfamily) G3580_07375 PF05762 VWA domain containing CoxE-like protein G3580_07395 PF04205 FMN-binding domain G3580_07395 PF12801 4Fe-4S binding domain G3580_07400 PF00072 Response regulator receiver domain G3580_07400 PF00196 Bacterial regulatory proteins, luxR family G3580_07405 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase G3580_07405 PF05231 MASE1 G3580_07405 PF07730 Histidine kinase G3580_07440 PF13360 PQQ-like domain G3580_07440 PF01011 PQQ enzyme repeat G3580_07445 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase G3580_07445 PF05231 MASE1 G3580_07445 PF07730 Histidine kinase G3580_07450 PF00072 Response regulator receiver domain G3580_07450 PF00196 Bacterial regulatory proteins, luxR family G3580_07460 PF01590 GAF domain G3580_07460 PF02954 Bacterial regulatory protein, Fis family G3580_07460 PF00158 Sigma-54 interaction domain G3580_07470 PF00171 Aldehyde dehydrogenase family G3580_07485 PF13442 Cytochrome C oxidase, cbb3-type, subunit III G3580_07485 PF13360 PQQ-like domain G3580_07485 PF01011 PQQ enzyme repeat G3580_07490 PF01590 GAF domain G3580_07490 PF02954 Bacterial regulatory protein, Fis family G3580_07490 PF00158 Sigma-54 interaction domain G3580_07495 PF00027 Cyclic nucleotide-binding domain G3580_07495 PF13545 Crp-like helix-turn-helix domain G3580_07525 PF02503 Polyphosphate kinase middle domain G3580_07525 PF13090 Polyphosphate kinase C-terminal domain 2 G3580_07525 PF17941 Polyphosphate kinase C-terminal domain 1 G3580_07525 PF13089 Polyphosphate kinase N-terminal domain G3580_07530 PF02541 Ppx/GppA phosphatase family G3580_07535 PF02405 Permease MlaE G3580_07540 PF00005 ABC transporter G3580_07555 PF00501 AMP-binding enzyme G3580_07555 PF13193 AMP-binding enzyme C-terminal domain G3580_07560 PF00378 Enoyl-CoA hydratase/isomerase G3580_07565 PF01026 TatD related DNase G3580_07570 PF00440 Bacterial regulatory proteins, tetR family G3580_07570 PF02909 Tetracyclin repressor-like, C-terminal domain G3580_07575 PF01012 Electron transfer flavoprotein domain G3580_07580 PF01012 Electron transfer flavoprotein domain G3580_07580 PF00766 Electron transfer flavoprotein FAD-binding domain G3580_07590 PF00441 Acyl-CoA dehydrogenase, C-terminal domain G3580_07590 PF02771 Acyl-CoA dehydrogenase, N-terminal domain G3580_07590 PF02770 Acyl-CoA dehydrogenase, middle domain G3580_07590 PF12806 Acetyl-CoA dehydrogenase C-terminal like G3580_07605 PF03795 YCII-related domain G3580_07610 PF04279 Intracellular septation protein A G3580_07620 PF00753 Metallo-beta-lactamase superfamily G3580_07625 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase G3580_07625 PF00672 HAMP domain G3580_07625 PF00512 His Kinase A (phospho-acceptor) domain G3580_07630 PF00072 Response regulator receiver domain G3580_07630 PF00486 Transcriptional regulatory protein, C terminal G3580_07640 PF00814 Glycoprotease family G3580_07645 PF00583 Acetyltransferase (GNAT) family G3580_07650 PF03167 Uracil DNA glycosylase superfamily G3580_07670 PF07690 Major Facilitator Superfamily G3580_07675 PF03466 LysR substrate binding domain G3580_07675 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family G3580_07680 PF18073 Rubredoxin metal binding domain G3580_07700 PF01965 DJ-1/PfpI family G3580_07700 PF12833 Helix-turn-helix domain G3580_07705 PF00689 Cation transporting ATPase, C-terminus G3580_07705 PF00690 Cation transporter/ATPase, N-terminus G3580_07715 PF00175 Oxidoreductase NAD-binding domain G3580_07715 PF00970 Oxidoreductase FAD-binding domain G3580_07720 PF03466 LysR substrate binding domain G3580_07720 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family G3580_07725 PF08042 PqqA family G3580_07730 PF05402 Coenzyme PQQ synthesis protein D (PqqD) G3580_07735 PF04055 Radical SAM superfamily G3580_07735 PF13186 Iron-sulfur cluster-binding domain G3580_07750 PF00266 Aminotransferase class-V G3580_07755 PF01180 Dihydroorotate dehydrogenase G3580_07760 PF00512 His Kinase A (phospho-acceptor) domain G3580_07760 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase G3580_07760 PF00989 PAS fold G3580_07765 PF05958 tRNA (Uracil-5-)-methyltransferase G3580_07770 PF00990 Diguanylate cyclase, GGDEF domain G3580_07770 PF00563 EAL domain G3580_07770 PF03707 Bacterial signalling protein N terminal repeat G3580_07785 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component G3580_07790 PF04290 Tripartite ATP-independent periplasmic transporters, DctQ component G3580_07795 PF03480 Bacterial extracellular solute-binding protein, family 7 G3580_07800 PF13404 AsnC-type helix-turn-helix domain G3580_07800 PF01037 Lrp/AsnC ligand binding domain G3580_07810 PF02770 Acyl-CoA dehydrogenase, middle domain G3580_07810 PF18158 Adaptive response protein AidB N-terminal domain G3580_07810 PF00441 Acyl-CoA dehydrogenase, C-terminal domain G3580_07815 PF03466 LysR substrate binding domain G3580_07815 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family G3580_07820 PF05726 Pirin C-terminal cupin domain G3580_07820 PF02678 Pirin G3580_07825 PF00857 Isochorismatase family G3580_07835 PF01266 FAD dependent oxidoreductase G3580_07840 PF08240 Alcohol dehydrogenase GroES-like domain G3580_07840 PF00107 Zinc-binding dehydrogenase G3580_07850 PF00672 HAMP domain G3580_07850 PF02203 Tar ligand binding domain homologue G3580_07850 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain G3580_07865 PF02028 BCCT, betaine/carnitine/choline family transporter G3580_07875 PF10605 3HB-oligomer hydrolase (3HBOH) G3580_07880 PF00561 alpha/beta hydrolase fold G3580_07895 PF02074 Carboxypeptidase Taq (M32) metallopeptidase G3580_07900 PF03150 Di-haem cytochrome c peroxidase G3580_07900 PF00034 Cytochrome c G3580_07930 PF13361 UvrD-like helicase C-terminal domain G3580_07930 PF00580 UvrD/REP helicase N-terminal domain G3580_07970 PF02347 Glycine cleavage system P-protein G3580_07975 PF01597 Glycine cleavage H-protein G3580_07980 PF01571 Aminomethyltransferase folate-binding domain G3580_07980 PF08669 Glycine cleavage T-protein C-terminal barrel domain G3580_07985 PF12697 Alpha/beta hydrolase family G3580_07990 PF02811 PHP domain G3580_07995 PF01300 Telomere recombination G3580_08000 PF02163 Peptidase family M50 G3580_08005 PF00579 tRNA synthetases class I (W and Y) G3580_08010 PF02616 Segregation and condensation protein ScpA G3580_08015 PF04079 Segregation and condensation complex subunit ScpB G3580_08020 PF01479 S4 domain G3580_08020 PF00849 RNA pseudouridylate synthase G3580_08025 PF02576 RimP N-terminal domain G3580_08025 PF17384 RimP C-terminal SH3 domain G3580_08030 PF08529 NusA N-terminal domain G3580_08030 PF13184 NusA-like KH domain G3580_08035 PF00009 Elongation factor Tu GTP binding domain G3580_08035 PF11987 Translation-initiation factor 2 G3580_08035 PF08364 Bacterial translation initiation factor IF-2 associated region G3580_08035 PF04760 Translation initiation factor IF-2, N-terminal region G3580_08040 PF02033 Ribosome-binding factor A G3580_08045 PF01509 TruB family pseudouridylate synthase (N terminal domain) G3580_08045 PF16198 tRNA pseudouridylate synthase B C-terminal domain G3580_08045 PF09157 Pseudouridine synthase II TruB, C-terminal G3580_08050 PF00312 Ribosomal protein S15 G3580_08055 PF00575 S1 RNA binding domain G3580_08055 PF01138 3' exoribonuclease family, domain 1 G3580_08055 PF03726 Polyribonucleotide nucleotidyltransferase, RNA binding domain G3580_08055 PF00013 KH domain G3580_08055 PF03725 3' exoribonuclease family, domain 2 G3580_08060 PF01258 Prokaryotic dksA/traR C4-type zinc finger G3580_08080 PF01323 DSBA-like thioredoxin domain G3580_08165 PF00004 ATPase family associated with various cellular activities (AAA) G3580_08165 PF16450 Proteasomal ATPase OB C-terminal domain G3580_08165 PF17758 Proteasomal ATPase OB N-terminal domain G3580_08195 PF00158 Sigma-54 interaction domain G3580_08195 PF02830 V4R domain G3580_08195 PF06505 Activator of aromatic catabolism G3580_08195 PF02954 Bacterial regulatory protein, Fis family G3580_08200 PF00111 2Fe-2S iron-sulfur cluster binding domain G3580_08205 PF06099 Phenol hydroxylase subunit G3580_08210 PF02332 Methane/Phenol/Toluene Hydroxylase G3580_08215 PF02406 MmoB/DmpM family G3580_08220 PF02332 Methane/Phenol/Toluene Hydroxylase G3580_08220 PF04945 YHS domain G3580_08225 PF04663 Phenol hydroxylase conserved region G3580_08230 PF00175 Oxidoreductase NAD-binding domain G3580_08230 PF00970 Oxidoreductase FAD-binding domain G3580_08230 PF00111 2Fe-2S iron-sulfur cluster binding domain G3580_08235 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily G3580_08240 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily G3580_08250 PF00392 Bacterial regulatory proteins, gntR family G3580_08250 PF07729 FCD domain G3580_08260 PF00171 Aldehyde dehydrogenase family G3580_08265 PF00561 alpha/beta hydrolase fold G3580_08275 PF09290 Prokaryotic acetaldehyde dehydrogenase, dimerisation G3580_08275 PF01118 Semialdehyde dehydrogenase, NAD binding domain G3580_08280 PF07836 DmpG-like communication domain G3580_08280 PF00682 HMGL-like G3580_08315 PF00355 Rieske [2Fe-2S] domain G3580_08320 PF00970 Oxidoreductase FAD-binding domain G3580_08320 PF00111 2Fe-2S iron-sulfur cluster binding domain G3580_08325 PF00196 Bacterial regulatory proteins, luxR family G3580_08325 PF17874 MalT-like TPR region G3580_08335 PF02830 V4R domain G3580_08335 PF00158 Sigma-54 interaction domain G3580_08335 PF02954 Bacterial regulatory protein, Fis family G3580_08335 PF06505 Activator of aromatic catabolism G3580_08340 PF00111 2Fe-2S iron-sulfur cluster binding domain G3580_08345 PF00355 Rieske [2Fe-2S] domain G3580_08355 PF00072 Response regulator receiver domain G3580_08355 PF00486 Transcriptional regulatory protein, C terminal G3580_08360 PF13188 PAS domain G3580_08360 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase G3580_08360 PF00512 His Kinase A (phospho-acceptor) domain G3580_08360 PF08448 PAS fold G3580_08360 PF00072 Response regulator receiver domain G3580_08365 PF13193 AMP-binding enzyme C-terminal domain G3580_08365 PF00501 AMP-binding enzyme G3580_08380 PF03205 Molybdopterin guanine dinucleotide synthesis protein B G3580_08385 PF03454 MoeA C-terminal region (domain IV) G3580_08385 PF03453 MoeA N-terminal region (domain I and II) G3580_08385 PF00994 Probable molybdopterin binding domain G3580_08390 PF02597 ThiS family G3580_08395 PF02391 MoaE protein G3580_08405 PF10431 C-terminal, D2-small domain, of ClpB protein G3580_08405 PF02861 Clp amino terminal domain, pathogenicity island component G3580_08405 PF17871 AAA lid domain G3580_08405 PF07724 AAA domain (Cdc48 subfamily) G3580_08405 PF00004 ATPase family associated with various cellular activities (AAA) G3580_08410 PF13495 Phage integrase, N-terminal SAM-like domain G3580_08410 PF00589 Phage integrase family G3580_08440 PF04151 Bacterial pre-peptidase C-terminal domain G3580_08440 PF00082 Subtilase family G3580_08460 PF11614 IG-like fold at C-terminal of FixG, putative oxidoreductase G3580_08460 PF12801 4Fe-4S binding domain G3580_08460 PF13746 4Fe-4S dicluster domain G3580_08470 PF03466 LysR substrate binding domain G3580_08470 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family G3580_08475 PF03781 Sulfatase-modifying factor enzyme 1 G3580_08480 PF00534 Glycosyl transferases group 1 G3580_08480 PF13439 Glycosyltransferase Family 4 G3580_08490 PF01161 Phosphatidylethanolamine-binding protein G3580_08510 PF01914 MarC family integral membrane protein G3580_08515 PF00672 HAMP domain G3580_08515 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain G3580_08520 PF07992 Pyridine nucleotide-disulphide oxidoreductase G3580_08520 PF00724 NADH:flavin oxidoreductase / NADH oxidase family G3580_08545 PF00990 Diguanylate cyclase, GGDEF domain G3580_08545 PF03707 Bacterial signalling protein N terminal repeat G3580_08545 PF00563 EAL domain G3580_08550 PF00043 Glutathione S-transferase, C-terminal domain G3580_08550 PF02798 Glutathione S-transferase, N-terminal domain G3580_08555 PF07669 Eco57I restriction-modification methylase G3580_08555 PF02384 N-6 DNA Methylase G3580_08565 PF00313 'Cold-shock' DNA-binding domain G3580_08570 PF01926 50S ribosome-binding GTPase G3580_08575 PF00809 Pterin binding enzyme G3580_08580 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I G3580_08580 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II G3580_08580 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III G3580_08580 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain G3580_08585 PF00121 Triosephosphate isomerase G3580_08590 PF03840 Preprotein translocase SecG subunit G3580_08600 PF00507 NADH-ubiquinone/plastoquinone oxidoreductase, chain 3 G3580_08605 PF01058 NADH ubiquinone oxidoreductase, 20 Kd subunit G3580_08610 PF00329 Respiratory-chain NADH dehydrogenase, 30 Kd subunit G3580_08615 PF00346 Respiratory-chain NADH dehydrogenase, 49 Kd subunit G3580_08625 PF10531 SLBB domain G3580_08625 PF10589 NADH-ubiquinone oxidoreductase-F iron-sulfur binding region G3580_08625 PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit G3580_08630 PF00384 Molybdopterin oxidoreductase G3580_08630 PF10588 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region G3580_08630 PF09326 NADH-ubiquinone oxidoreductase subunit G, C-terminal G3580_08635 PF00146 NADH dehydrogenase G3580_08640 PF12838 4Fe-4S dicluster domain G3580_08645 PF00499 NADH-ubiquinone/plastoquinone oxidoreductase chain 6 G3580_08650 PF00420 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L G3580_08655 PF00361 Proton-conducting membrane transporter G3580_08655 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus G3580_08660 PF01059 NADH-ubiquinone oxidoreductase chain 4, amino terminus G3580_08660 PF00361 Proton-conducting membrane transporter G3580_08665 PF00361 Proton-conducting membrane transporter G3580_08670 PF00293 NUDIX domain G3580_08675 PF00317 Ribonucleotide reductase, all-alpha domain G3580_08675 PF03477 ATP cone domain G3580_08675 PF02867 Ribonucleotide reductase, barrel domain G3580_08680 PF00072 Response regulator receiver domain G3580_08685 PF17149 Periplasmic sensor domain found in signal transduction proteins G3580_08685 PF00672 HAMP domain G3580_08685 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase G3580_08685 PF00512 His Kinase A (phospho-acceptor) domain G3580_08685 PF01627 Hpt domain G3580_08685 PF00072 Response regulator receiver domain G3580_08690 PF10589 NADH-ubiquinone oxidoreductase-F iron-sulfur binding region G3580_08690 PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit G3580_08695 PF10588 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region G3580_08700 PF01058 NADH ubiquinone oxidoreductase, 20 Kd subunit G3580_08705 PF00374 Nickel-dependent hydrogenase G3580_08720 PF01545 Cation efflux family G3580_08750 PF03449 Transcription elongation factor, N-terminal G3580_08750 PF01272 Transcription elongation factor, GreA/GreB, C-term G3580_08755 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase G3580_08755 PF00183 Hsp90 protein G3580_08760 PF00654 Voltage gated chloride channel G3580_08765 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain G3580_08765 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain G3580_08775 PF02866 lactate/malate dehydrogenase, alpha/beta C-terminal domain G3580_08775 PF00056 lactate/malate dehydrogenase, NAD binding domain G3580_08780 PF07702 UTRA domain G3580_08780 PF00392 Bacterial regulatory proteins, gntR family G3580_08795 PF00890 FAD binding domain G3580_08795 PF02910 Fumarate reductase flavoprotein C-term G3580_08800 PF13085 2Fe-2S iron-sulfur cluster binding domain G3580_08805 PF03937 Flavinator of succinate dehydrogenase G3580_08810 PF00285 Citrate synthase, C-terminal domain G3580_08815 PF16078 2-oxoglutarate dehydrogenase N-terminus G3580_08815 PF02779 Transketolase, pyrimidine binding domain G3580_08815 PF16870 2-oxoglutarate dehydrogenase C-terminal G3580_08815 PF00676 Dehydrogenase E1 component G3580_08820 PF00364 Biotin-requiring enzyme G3580_08820 PF02817 e3 binding domain G3580_08820 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) G3580_08825 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain G3580_08825 PF07992 Pyridine nucleotide-disulphide oxidoreductase G3580_08830 PF03969 AFG1-like ATPase G3580_08840 PF04851 Type III restriction enzyme, res subunit G3580_08840 PF13307 Helicase C-terminal domain G3580_08845 PF07687 Peptidase dimerisation domain G3580_08845 PF01546 Peptidase family M20/M25/M40 G3580_08860 PF06463 Molybdenum Cofactor Synthesis C G3580_08860 PF04055 Radical SAM superfamily G3580_08875 PF00155 Aminotransferase class I and II G3580_08880 PF02151 UvrB/uvrC motif G3580_08880 PF04851 Type III restriction enzyme, res subunit G3580_08880 PF12344 Ultra-violet resistance protein B G3580_08880 PF17757 UvrB interaction domain G3580_08880 PF00271 Helicase conserved C-terminal domain G3580_08885 PF01451 Low molecular weight phosphotyrosine protein phosphatase G3580_08890 PF12111 Polyribonucleotide phosphorylase C terminal G3580_08890 PF10150 Ribonuclease E/G family G3580_08890 PF00575 S1 RNA binding domain G3580_08895 PF00849 RNA pseudouridylate synthase G3580_08895 PF01479 S4 domain G3580_08910 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases G3580_08915 PF02545 Maf-like protein G3580_08920 PF02620 Large ribosomal RNA subunit accumulation protein YceD G3580_08925 PF01783 Ribosomal L32p protein family G3580_08930 PF02504 Fatty acid synthesis protein G3580_08935 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal G3580_08935 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III G3580_08940 PF00698 Acyl transferase domain G3580_08950 PF00550 Phosphopantetheine attachment site G3580_08955 PF00109 Beta-ketoacyl synthase, N-terminal domain G3580_08955 PF02801 Beta-ketoacyl synthase, C-terminal domain G3580_08965 PF00890 FAD binding domain G3580_08965 PF02910 Fumarate reductase flavoprotein C-term G3580_08970 PF04542 Sigma-70 region 2 G3580_08970 PF08281 Sigma-70, region 4 G3580_08990 PF13180 PDZ domain G3580_09000 PF03144 Elongation factor Tu domain 2 G3580_09000 PF06421 GTP-binding protein LepA C-terminus G3580_09000 PF00679 Elongation factor G C-terminus G3580_09000 PF00009 Elongation factor Tu GTP binding domain G3580_09005 PF10502 Signal peptidase, peptidase S26 G3580_09015 PF00035 Double-stranded RNA binding motif G3580_09015 PF14622 Ribonuclease-III-like G3580_09020 PF01926 50S ribosome-binding GTPase G3580_09020 PF07650 KH domain G3580_09025 PF02565 Recombination protein O C terminal G3580_09025 PF11967 Recombination protein O N terminal G3580_09030 PF03740 Pyridoxal phosphate biosynthesis protein PdxJ G3580_09035 PF01648 4'-phosphopantetheinyl transferase superfamily G3580_09040 PF00933 Glycosyl hydrolase family 3 N terminal domain G3580_09050 PF01066 CDP-alcohol phosphatidyltransferase G3580_09085 PF03776 Septum formation topological specificity factor MinE G3580_09090 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain G3580_09095 PF05209 Septum formation inhibitor MinC, N-terminal domain G3580_09095 PF03775 Septum formation inhibitor MinC, C-terminal domain G3580_09100 PF01430 Hsp33 protein G3580_09105 PF03960 ArsC family G3580_09110 PF09371 Tex-like protein N-terminal domain G3580_09110 PF00575 S1 RNA binding domain G3580_09110 PF17674 HHH domain G3580_09110 PF16921 Tex protein YqgF-like domain G3580_09125 PF03352 Methyladenine glycosylase G3580_09130 PF00583 Acetyltransferase (GNAT) family G3580_09130 PF13607 Succinyl-CoA ligase like flavodoxin domain G3580_09130 PF13380 CoA binding domain G3580_09135 PF16527 Two-component sensor protein CpxA, periplasmic domain G3580_09135 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase G3580_09135 PF00672 HAMP domain G3580_09135 PF00512 His Kinase A (phospho-acceptor) domain G3580_09140 PF00171 Aldehyde dehydrogenase family G3580_09150 PF03992 Antibiotic biosynthesis monooxygenase G3580_09155 PF00581 Rhodanese-like domain G3580_09160 PF00586 AIR synthase related protein, N-terminal domain G3580_09160 PF02769 AIR synthase related protein, C-terminal domain G3580_09165 PF13472 GDSL-like Lipase/Acylhydrolase family G3580_09170 PF00005 ABC transporter G3580_09175 PF01134 Glucose inhibited division protein A G3580_09200 PF04293 SpoVR like protein G3580_09205 PF04285 Protein of unknown function (DUF444) G3580_09210 PF06798 PrkA serine protein kinase C-terminal domain G3580_09210 PF08298 PrkA AAA domain G3580_09215 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase G3580_09215 PF05698 Bacterial trigger factor protein (TF) C-terminus G3580_09215 PF05697 Bacterial trigger factor protein (TF) G3580_09220 PF00574 Clp protease G3580_09225 PF07724 AAA domain (Cdc48 subfamily) G3580_09225 PF10431 C-terminal, D2-small domain, of ClpB protein G3580_09225 PF06689 ClpX C4-type zinc finger G3580_09230 PF00004 ATPase family associated with various cellular activities (AAA) G3580_09230 PF02190 ATP-dependent protease La (LON) substrate-binding domain G3580_09230 PF05362 Lon protease (S16) C-terminal proteolytic domain G3580_09235 PF00216 Bacterial DNA-binding protein G3580_09260 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle G3580_09265 PF00528 Binding-protein-dependent transport system inner membrane component G3580_09270 PF00528 Binding-protein-dependent transport system inner membrane component G3580_09270 PF12911 N-terminal TM domain of oligopeptide transport permease C G3580_09295 PF01875 Memo-like protein G3580_09305 PF01128 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase G3580_09310 PF02542 YgbB family G3580_09325 PF03358 NADPH-dependent FMN reductase G3580_09330 PF06167 Glucose-regulated metallo-peptidase M90 G3580_09335 PF00892 EamA-like transporter family G3580_09340 PF02824 TGS domain G3580_09340 PF13291 ACT domain G3580_09340 PF04607 Region found in RelA / SpoT proteins G3580_09350 PF00486 Transcriptional regulatory protein, C terminal G3580_09350 PF00072 Response regulator receiver domain G3580_09365 PF00258 Flavodoxin G3580_09365 PF01613 Flavin reductase like domain G3580_09375 PF13588 Type I restriction enzyme R protein N terminus (HSDR_N) G3580_09375 PF04851 Type III restriction enzyme, res subunit G3580_09375 PF08463 EcoEI R protein C-terminal G3580_09375 PF00271 Helicase conserved C-terminal domain G3580_09385 PF12161 HsdM N-terminal domain G3580_09385 PF02384 N-6 DNA Methylase G3580_09390 PF01420 Type I restriction modification DNA specificity domain G3580_09425 PF00749 tRNA synthetases class I (E and Q), catalytic domain G3580_09435 PF05430 S-adenosyl-L-methionine-dependent methyltransferase G3580_09435 PF01266 FAD dependent oxidoreductase G3580_09445 PF01336 OB-fold nucleic acid binding domain G3580_09445 PF00152 tRNA synthetases class II (D, K and N) G3580_09450 PF17158 Membrane-associated sensor, integral membrane domain G3580_09450 PF00990 Diguanylate cyclase, GGDEF domain G3580_09455 PF02463 RecF/RecN/SMC N terminal domain G3580_09455 PF06470 SMC proteins Flexible Hinge Domain G3580_09475 PF12849 PBP superfamily domain G3580_09485 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family G3580_09485 PF03459 TOBE domain G3580_09490 PF02272 DHHA1 domain G3580_09490 PF17768 RecJ OB domain G3580_09490 PF01368 DHH family G3580_09500 PF12704 MacB-like periplasmic core domain G3580_09500 PF02687 FtsX-like permease family G3580_09505 PF00005 ABC transporter G3580_09510 PF17200 Single Cache domain 2 G3580_09510 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain G3580_09510 PF00672 HAMP domain G3580_09520 PF00753 Metallo-beta-lactamase superfamily G3580_09520 PF03772 Competence protein G3580_09540 PF03618 Kinase/pyrophosphorylase G3580_09545 PF02896 PEP-utilising enzyme, TIM barrel domain G3580_09545 PF00391 PEP-utilising enzyme, mobile domain G3580_09545 PF01326 Pyruvate phosphate dikinase, PEP/pyruvate binding domain G3580_09550 PF01476 LysM domain G3580_09550 PF08525 Opacity-associated protein A N-terminal motif G3580_09550 PF01551 Peptidase family M23 G3580_09570 PF01145 SPFH domain / Band 7 family G3580_09570 PF16200 C-terminal region of band_7 G3580_09575 PF13231 Dolichyl-phosphate-mannose-protein mannosyltransferase G3580_09585 PF00535 Glycosyl transferase family 2 G3580_09595 PF01569 PAP2 superfamily G3580_09600 PF18076 Formylglycinamide ribonucleotide amidotransferase N-terminal G3580_09600 PF18072 Formylglycinamide ribonucleotide amidotransferase linker domain G3580_09600 PF02769 AIR synthase related protein, C-terminal domain G3580_09620 PF13193 AMP-binding enzyme C-terminal domain G3580_09620 PF00501 AMP-binding enzyme G3580_09630 PF06418 CTP synthase N-terminus G3580_09630 PF00117 Glutamine amidotransferase class-I G3580_09635 PF00793 DAHP synthetase I family G3580_09640 PF00113 Enolase, C-terminal TIM barrel domain G3580_09640 PF03952 Enolase, N-terminal domain G3580_09645 PF04977 Septum formation initiator G3580_09650 PF00571 CBS domain G3580_09650 PF01743 Poly A polymerase head domain G3580_09655 PF00877 NlpC/P60 family G3580_09660 PF02580 D-Tyr-tRNA(Tyr) deacylase G3580_09680 PF00132 Bacterial transferase hexapeptide (six repeats) G3580_09695 PF00378 Enoyl-CoA hydratase/isomerase G3580_09725 PF01329 Pterin 4 alpha carbinolamine dehydratase G3580_09735 PF01053 Cys/Met metabolism PLP-dependent enzyme G3580_09750 PF13614 AAA domain G3580_09770 PF02625 XdhC and CoxI family G3580_09770 PF13478 XdhC Rossmann domain G3580_09775 PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase G3580_09780 PF00111 2Fe-2S iron-sulfur cluster binding domain G3580_09780 PF01799 [2Fe-2S] binding domain G3580_09785 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family G3580_09785 PF03466 LysR substrate binding domain G3580_09790 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) G3580_09790 PF00072 Response regulator receiver domain G3580_09790 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase G3580_09790 PF00512 His Kinase A (phospho-acceptor) domain G3580_09790 PF00672 HAMP domain G3580_09790 PF01627 Hpt domain G3580_09795 PF02321 Outer membrane efflux protein G3580_09800 PF00873 AcrB/AcrD/AcrF family G3580_09805 PF13533 Biotin-lipoyl like G3580_09815 PF03466 LysR substrate binding domain G3580_09815 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family G3580_09820 PF00512 His Kinase A (phospho-acceptor) domain G3580_09820 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase G3580_09820 PF00672 HAMP domain G3580_09825 PF07731 Multicopper oxidase G3580_09825 PF07732 Multicopper oxidase G3580_09825 PF00394 Multicopper oxidase G3580_09830 PF05275 Copper resistance protein B precursor (CopB) G3580_09845 PF04945 YHS domain G3580_09875 PF08534 Redoxin G3580_09880 PF02683 Cytochrome C biogenesis protein transmembrane region G3580_09895 PF04303 PrpF protein G3580_09900 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain G3580_09900 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain G3580_09900 PF11890 Domain of unknown function (DUF3410) G3580_09905 PF07690 Major Facilitator Superfamily G3580_09920 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family G3580_09920 PF03466 LysR substrate binding domain G3580_09930 PF10397 Adenylosuccinate lyase C-terminus G3580_09930 PF00206 Lyase G3580_09935 PF03328 HpcH/HpaI aldolase/citrate lyase family G3580_09940 PF02515 CoA-transferase family III G3580_09950 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component G3580_09955 PF04290 Tripartite ATP-independent periplasmic transporters, DctQ component G3580_09960 PF03480 Bacterial extracellular solute-binding protein, family 7 G3580_09965 PF04303 PrpF protein G3580_09970 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family G3580_09970 PF03466 LysR substrate binding domain G3580_09980 PF02634 FdhD/NarQ family G3580_09985 PF04879 Molybdopterin oxidoreductase Fe4S4 domain G3580_09985 PF00384 Molybdopterin oxidoreductase G3580_09985 PF01568 Molydopterin dinucleotide binding domain G3580_09985 PF10588 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region G3580_09985 PF00037 4Fe-4S binding domain G3580_09990 PF10589 NADH-ubiquinone oxidoreductase-F iron-sulfur binding region G3580_09990 PF10531 SLBB domain G3580_09990 PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit G3580_10000 PF03466 LysR substrate binding domain G3580_10000 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family G3580_10010 PF00158 Sigma-54 interaction domain G3580_10010 PF02954 Bacterial regulatory protein, Fis family G3580_10010 PF01590 GAF domain G3580_10020 PF01026 TatD related DNase G3580_10030 PF09115 DNA polymerase III, delta subunit, C terminal G3580_10035 PF02223 Thymidylate kinase G3580_10040 PF02618 YceG-like family G3580_10070 PF14437 MafB19-like deaminase G3580_10075 PF00989 PAS fold G3580_10075 PF00512 His Kinase A (phospho-acceptor) domain G3580_10075 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase G3580_10095 PF00958 GMP synthase C terminal domain G3580_10095 PF00117 Glutamine amidotransferase class-I G3580_10095 PF02540 NAD synthase G3580_10100 PF00478 IMP dehydrogenase / GMP reductase domain G3580_10100 PF00571 CBS domain G3580_10110 PF03658 RnfH family Ubiquitin G3580_10115 PF03364 Polyketide cyclase / dehydrase and lipid transport G3580_10120 PF01668 SmpB protein G3580_10125 PF00512 His Kinase A (phospho-acceptor) domain G3580_10125 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase G3580_10130 PF00072 Response regulator receiver domain G3580_10130 PF02954 Bacterial regulatory protein, Fis family G3580_10130 PF00158 Sigma-54 interaction domain G3580_10135 PF16868 NMT1-like family G3580_10145 PF07690 Major Facilitator Superfamily G3580_10150 PF00529 HlyD membrane-fusion protein of T1SS G3580_10150 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion G3580_10155 PF01047 MarR family G3580_10170 PF01336 OB-fold nucleic acid binding domain G3580_10170 PF02811 PHP domain G3580_10170 PF14579 Helix-hairpin-helix motif G3580_10170 PF17657 Bacterial DNA polymerase III alpha subunit finger domain G3580_10170 PF07733 Bacterial DNA polymerase III alpha NTPase domain G3580_10175 PF13180 PDZ domain G3580_10190 PF00271 Helicase conserved C-terminal domain G3580_10190 PF03461 TRCF domain G3580_10190 PF17757 UvrB interaction domain G3580_10190 PF00270 DEAD/DEAH box helicase G3580_10190 PF02559 CarD-like/TRCF domain G3580_10195 PF00793 DAHP synthetase I family G3580_10205 PF04715 Anthranilate synthase component I, N terminal region G3580_10205 PF00425 chorismate binding enzyme G3580_10210 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family G3580_10210 PF03466 LysR substrate binding domain G3580_10215 PF02900 Catalytic LigB subunit of aromatic ring-opening dioxygenase G3580_10220 PF01292 Prokaryotic cytochrome b561 G3580_10230 PF04264 YceI-like domain G3580_10235 PF13409 Glutathione S-transferase, N-terminal domain G3580_10260 PF00072 Response regulator receiver domain G3580_10260 PF00158 Sigma-54 interaction domain G3580_10270 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase G3580_10270 PF00512 His Kinase A (phospho-acceptor) domain G3580_10290 PF00072 Response regulator receiver domain G3580_10290 PF00990 Diguanylate cyclase, GGDEF domain G3580_10295 PF08448 PAS fold G3580_10295 PF00990 Diguanylate cyclase, GGDEF domain G3580_10295 PF00563 EAL domain G3580_10310 PF00881 Nitroreductase family G3580_10315 PF05981 CreA protein G3580_10320 PF00437 Type II/IV secretion system protein G3580_10320 PF05157 Type II secretion system (T2SS), protein E, N-terminal domain G3580_10325 PF07995 Glucose / Sorbosone dehydrogenase G3580_10335 PF12334 Rickettsia outer membrane protein B G3580_10335 PF03797 Autotransporter beta-domain G3580_10340 PF17785 PUA-like domain G3580_10340 PF10672 S-adenosylmethionine-dependent methyltransferase G3580_10355 PF04102 SlyX G3580_10365 PF18027 Cytosolic carboxypeptidase N-terminal domain G3580_10365 PF00246 Zinc carboxypeptidase G3580_10370 PF03883 Peroxide stress protein YaaA G3580_10375 PF00202 Aminotransferase class-III G3580_10380 PF00155 Aminotransferase class I and II G3580_10385 PF12697 Alpha/beta hydrolase family G3580_10390 PF08241 Methyltransferase domain G3580_10400 PF00916 Sulfate permease family G3580_10400 PF01740 STAS domain G3580_10410 PF08032 RNA 2'-O ribose methyltransferase substrate binding G3580_10410 PF00588 SpoU rRNA Methylase family G3580_10415 PF01351 Ribonuclease HII G3580_10420 PF02684 Lipid-A-disaccharide synthetase G3580_10425 PF00132 Bacterial transferase hexapeptide (six repeats) G3580_10425 PF13720 Udp N-acetylglucosamine O-acyltransferase; Domain 2 G3580_10430 PF07977 FabA-like domain G3580_10435 PF14602 Hexapeptide repeat of succinyl-transferase G3580_10435 PF00132 Bacterial transferase hexapeptide (six repeats) G3580_10435 PF04613 UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase, LpxD G3580_10445 PF01103 Surface antigen G3580_10445 PF07244 Surface antigen variable number repeat G3580_10450 PF02163 Peptidase family M50 G3580_10450 PF13180 PDZ domain G3580_10450 PF17820 PDZ domain G3580_10455 PF13288 DXP reductoisomerase C-terminal domain G3580_10455 PF02670 1-deoxy-D-xylulose 5-phosphate reductoisomerase G3580_10455 PF08436 1-deoxy-D-xylulose 5-phosphate reductoisomerase C-terminal domain G3580_10465 PF01255 Putative undecaprenyl diphosphate synthase G3580_10470 PF01765 Ribosome recycling factor G3580_10475 PF00696 Amino acid kinase family G3580_10480 PF00889 Elongation factor TS G3580_10485 PF00318 Ribosomal protein S2 G3580_10490 PF00557 Metallopeptidase family M24 G3580_10495 PF08335 GlnD PII-uridylyltransferase G3580_10495 PF01966 HD domain G3580_10500 PF01048 Phosphorylase superfamily G3580_10510 PF00483 Nucleotidyl transferase G3580_10515 PF12826 Helix-hairpin-helix motif G3580_10515 PF03120 NAD-dependent DNA ligase OB-fold domain G3580_10515 PF03119 NAD-dependent DNA ligase C4 zinc finger domain G3580_10515 PF00533 BRCA1 C Terminus (BRCT) domain G3580_10515 PF01653 NAD-dependent DNA ligase adenylation domain G3580_10525 PF02463 RecF/RecN/SMC N terminal domain G3580_10530 PF00155 Aminotransferase class I and II G3580_10535 PF00132 Bacterial transferase hexapeptide (six repeats) G3580_10535 PF14602 Hexapeptide repeat of succinyl-transferase G3580_10535 PF14805 Tetrahydrodipicolinate N-succinyltransferase N-terminal G3580_10540 PF00437 Type II/IV secretion system protein G3580_10545 PF01546 Peptidase family M20/M25/M40 G3580_10545 PF07687 Peptidase dimerisation domain G3580_10550 PF05175 Methyltransferase small domain G3580_10555 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain G3580_10555 PF00672 HAMP domain G3580_10555 PF02743 Cache domain G3580_10560 PF00072 Response regulator receiver domain G3580_10565 PF04384 Iron-sulphur cluster assembly G3580_10570 PF00111 2Fe-2S iron-sulfur cluster binding domain G3580_10575 PF00012 Hsp70 protein G3580_10580 PF07743 HSCB C-terminal oligomerisation domain G3580_10585 PF01521 Iron-sulphur cluster biosynthesis G3580_10590 PF01592 NifU-like N terminal domain G3580_10595 PF00266 Aminotransferase class-V G3580_10600 PF00266 Aminotransferase class-V G3580_10605 PF02082 Transcriptional regulator G3580_10610 PF00132 Bacterial transferase hexapeptide (six repeats) G3580_10615 PF00588 SpoU rRNA Methylase family G3580_10620 PF00459 Inositol monophosphatase family G3580_10625 PF00488 MutS domain V G3580_10625 PF05190 MutS family domain IV G3580_10625 PF05192 MutS domain III G3580_10625 PF05188 MutS domain II G3580_10625 PF01624 MutS domain I G3580_10635 PF00929 Exonuclease G3580_10640 PF00075 RNase H G3580_10645 PF08241 Methyltransferase domain G3580_10650 PF16123 Hydroxyacylglutathione hydrolase C-terminus G3580_10650 PF00753 Metallo-beta-lactamase superfamily G3580_10655 PF00360 Phytochrome region G3580_10655 PF00563 EAL domain G3580_10655 PF01590 GAF domain G3580_10655 PF00990 Diguanylate cyclase, GGDEF domain G3580_10660 PF01476 LysM domain G3580_10660 PF01464 Transglycosylase SLT domain G3580_10665 PF00005 ABC transporter G3580_10665 PF08352 Oligopeptide/dipeptide transporter, C-terminal region G3580_10670 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase G3580_10675 PF00578 AhpC/TSA family G3580_10680 PF01726 LexA DNA binding domain G3580_10680 PF00717 Peptidase S24-like G3580_10710 PF02913 FAD linked oxidases, C-terminal domain G3580_10710 PF01565 FAD binding domain G3580_10715 PF01734 Patatin-like phospholipase G3580_10720 PF18693 TRAM domain G3580_10720 PF00919 Uncharacterized protein family UPF0004 G3580_10720 PF04055 Radical SAM superfamily G3580_10725 PF07879 PHB/PHA accumulation regulator DNA-binding domain G3580_10725 PF05233 PHB accumulation regulatory domain G3580_10730 PF00106 short chain dehydrogenase G3580_10735 PF00106 short chain dehydrogenase G3580_10740 PF07167 Poly-beta-hydroxybutyrate polymerase (PhaC) N-terminus G3580_10755 PF00849 RNA pseudouridylate synthase G3580_10755 PF01479 S4 domain G3580_10760 PF13525 Outer membrane lipoprotein G3580_10770 PF01050 Mannose-6-phosphate isomerase G3580_10770 PF00483 Nucleotidyl transferase G3580_10790 PF13840 ACT domain G3580_10790 PF00696 Amino acid kinase family G3580_10790 PF01842 ACT domain G3580_10805 PF01242 6-pyruvoyl tetrahydropterin synthase G3580_10810 PF14403 Circularly permuted ATP-grasp type 2 G3580_10825 PF14403 Circularly permuted ATP-grasp type 2 G3580_10825 PF04168 A predicted alpha-helical domain with a conserved ER motif. G3580_10830 PF01841 Transglutaminase-like superfamily G3580_10830 PF08379 Bacterial transglutaminase-like N-terminal region G3580_10835 PF07556 Protein of unknown function (DUF1538) G3580_10840 PF07556 Protein of unknown function (DUF1538) G3580_10850 PF01743 Poly A polymerase head domain G3580_10850 PF00571 CBS domain G3580_10860 PF01938 TRAM domain G3580_10860 PF05958 tRNA (Uracil-5-)-methyltransferase G3580_10865 PF08007 Cupin superfamily protein G3580_10880 PF00753 Metallo-beta-lactamase superfamily G3580_10885 PF06804 NlpB/DapX lipoprotein G3580_10890 PF00701 Dihydrodipicolinate synthetase family G3580_10895 PF00850 Histone deacetylase domain G3580_10900 PF07726 ATPase family associated with various cellular activities (AAA) G3580_10900 PF17863 AAA lid domain G3580_10910 PF01841 Transglutaminase-like superfamily G3580_10910 PF13559 Domain of unknown function (DUF4129) G3580_10910 PF11992 Domain of unknown function (DUF3488) G3580_10920 PF00140 Sigma-70 factor, region 1.2 G3580_10920 PF04542 Sigma-70 region 2 G3580_10920 PF04539 Sigma-70 region 3 G3580_10920 PF04545 Sigma-70, region 4 G3580_10925 PF01476 LysM domain G3580_10925 PF01551 Peptidase family M23 G3580_10935 PF01975 Survival protein SurE G3580_10975 PF00691 OmpA family G3580_10980 PF01645 Conserved region in glutamate synthase G3580_10985 PF02749 Quinolinate phosphoribosyl transferase, N-terminal domain G3580_10985 PF01729 Quinolinate phosphoribosyl transferase, C-terminal domain G3580_10995 PF14821 Threonine synthase N terminus G3580_10995 PF00291 Pyridoxal-phosphate dependent enzyme G3580_11005 PF00155 Aminotransferase class I and II G3580_11010 PF04430 Protein of unknown function (DUF498/DUF598) G3580_11015 PF00578 AhpC/TSA family G3580_11020 PF13638 PIN domain G3580_11020 PF02562 PhoH-like protein G3580_11040 PF00877 NlpC/P60 family G3580_11050 PF13416 Bacterial extracellular solute-binding protein G3580_11055 PF00528 Binding-protein-dependent transport system inner membrane component G3580_11060 PF08402 TOBE domain G3580_11060 PF00005 ABC transporter G3580_11065 PF03588 Leucyl/phenylalanyl-tRNA protein transferase G3580_11070 PF04376 Arginine-tRNA-protein transferase, N terminus G3580_11070 PF04377 Arginine-tRNA-protein transferase, C terminus G3580_11075 PF01180 Dihydroorotate dehydrogenase G3580_11080 PF02508 Rnf-Nqr subunit, membrane protein G3580_11085 PF04060 Putative Fe-S cluster G3580_11090 PF12838 4Fe-4S dicluster domain G3580_11090 PF10531 SLBB domain G3580_11090 PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit G3580_11090 PF13375 RnfC Barrel sandwich hybrid domain G3580_11095 PF03116 NQR2, RnfD, RnfE family G3580_11100 PF04205 FMN-binding domain G3580_11105 PF02508 Rnf-Nqr subunit, membrane protein G3580_11110 PF00633 Helix-hairpin-helix motif G3580_11110 PF00730 HhH-GPD superfamily base excision DNA repair protein G3580_11110 PF10576 Iron-sulfur binding domain of endonuclease III G3580_11120 PF00034 Cytochrome c G3580_11125 PF00034 Cytochrome c G3580_11130 PF03412 Peptidase C39 family G3580_11130 PF00664 ABC transporter transmembrane region G3580_11130 PF00005 ABC transporter G3580_11150 PF00353 RTX calcium-binding nonapeptide repeat (4 copies) G3580_11150 PF06594 Haemolysin-type calcium binding protein related domain G3580_11155 PF00657 GDSL-like Lipase/Acylhydrolase G3580_11160 PF17862 AAA+ lid domain G3580_11160 PF01434 Peptidase family M41 G3580_11160 PF00004 ATPase family associated with various cellular activities (AAA) G3580_11190 PF00004 ATPase family associated with various cellular activities (AAA) G3580_11190 PF17862 AAA+ lid domain G3580_11190 PF06480 FtsH Extracellular G3580_11190 PF01434 Peptidase family M41 G3580_11195 PF01728 FtsJ-like methyltransferase G3580_11210 PF01272 Transcription elongation factor, GreA/GreB, C-term G3580_11210 PF03449 Transcription elongation factor, N-terminal G3580_11215 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain G3580_11215 PF02787 Carbamoyl-phosphate synthetase large chain, oligomerisation domain G3580_11215 PF02142 MGS-like domain G3580_11220 PF00117 Glutamine amidotransferase class-I G3580_11220 PF00988 Carbamoyl-phosphate synthase small chain, CPSase domain G3580_11225 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) G3580_11225 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase G3580_11225 PF01627 Hpt domain G3580_11225 PF00512 His Kinase A (phospho-acceptor) domain G3580_11225 PF00072 Response regulator receiver domain G3580_11225 PF00672 HAMP domain G3580_11230 PF05173 Dihydrodipicolinate reductase, C-terminus G3580_11230 PF01113 Dihydrodipicolinate reductase, N-terminus G3580_11235 PF04355 SmpA / OmlA family G3580_11240 PF01475 Ferric uptake regulator family G3580_11250 PF02463 RecF/RecN/SMC N terminal domain G3580_11255 PF01513 ATP-NAD kinase G3580_11260 PF01628 HrcA protein C terminal domain G3580_11260 PF03444 Winged helix-turn-helix transcription repressor, HrcA DNA-binding G3580_11265 PF00762 Ferrochelatase G3580_11280 PF00085 Thioredoxin G3580_11285 PF03793 PASTA domain G3580_11285 PF00069 Protein kinase domain G3580_11290 PF01025 GrpE G3580_11295 PF00012 Hsp70 protein G3580_11300 PF00684 DnaJ central domain G3580_11300 PF00226 DnaJ domain G3580_11300 PF01556 DnaJ C terminal domain G3580_11305 PF13458 Periplasmic binding protein G3580_11315 PF09190 DALR domain G3580_11315 PF01406 tRNA synthetases class I (C) catalytic domain G3580_11330 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD G3580_11335 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD G3580_11340 PF00149 Calcineurin-like phosphoesterase G3580_11345 PF01053 Cys/Met metabolism PLP-dependent enzyme G3580_11350 PF00156 Phosphoribosyl transferase domain G3580_11365 PF08245 Mur ligase middle domain G3580_11365 PF02875 Mur ligase family, glutamate ligase domain G3580_11370 PF01039 Carboxyl transferase domain G3580_11370 PF17848 Acetyl-coA carboxylase zinc finger domain G3580_11375 PF00290 Tryptophan synthase alpha chain G3580_11380 PF00291 Pyridoxal-phosphate dependent enzyme G3580_11385 PF00697 N-(5'phosphoribosyl)anthranilate (PRA) isomerase G3580_11390 PF01416 tRNA pseudouridine synthase G3580_11395 PF02361 Cobalt transport protein G3580_11405 PF01118 Semialdehyde dehydrogenase, NAD binding domain G3580_11405 PF02774 Semialdehyde dehydrogenase, dimerisation domain G3580_11410 PF00180 Isocitrate/isopropylmalate dehydrogenase G3580_11415 PF00694 Aconitase C-terminal domain G3580_11420 PF00330 Aconitase family (aconitate hydratase) G3580_11430 PF12832 MFS_1 like family G3580_11440 PF01264 Chorismate synthase G3580_11445 PF01842 ACT domain G3580_11450 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain G3580_11450 PF00205 Thiamine pyrophosphate enzyme, central domain G3580_11450 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain G3580_11455 PF13193 AMP-binding enzyme C-terminal domain G3580_11455 PF00501 AMP-binding enzyme G3580_11460 PF00571 CBS domain G3580_11460 PF01368 DHH family G3580_11460 PF02272 DHHA1 domain G3580_11460 PF01743 Poly A polymerase head domain G3580_11465 PF00580 UvrD/REP helicase N-terminal domain G3580_11465 PF13361 UvrD-like helicase C-terminal domain G3580_11465 PF12705 PD-(D/E)XK nuclease superfamily G3580_11470 PF12705 PD-(D/E)XK nuclease superfamily G3580_11475 PF00037 4Fe-4S binding domain G3580_11475 PF11953 Domain of unknown function (DUF3470) G3580_11480 PF00085 Thioredoxin G3580_11485 PF07498 Rho termination factor, N-terminal domain G3580_11485 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain G3580_11485 PF07497 Rho termination factor, RNA-binding domain G3580_11495 PF01936 NYN domain G3580_11495 PF09722 Protein of unknown function (DUF2384) G3580_11500 PF13660 Domain of unknown function (DUF4147) G3580_11500 PF05161 MOFRL family G3580_11505 PF03466 LysR substrate binding domain G3580_11505 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family G3580_11510 PF07690 Major Facilitator Superfamily G3580_11520 PF00330 Aconitase family (aconitate hydratase) G3580_11520 PF00694 Aconitase C-terminal domain G3580_11540 PF00486 Transcriptional regulatory protein, C terminal G3580_11540 PF00072 Response regulator receiver domain G3580_11550 PF03692 Putative zinc- or iron-chelating domain G3580_11565 PF03695 Uncharacterised protein family (UPF0149) G3580_11565 PF02810 SEC-C motif G3580_11575 PF01207 Dihydrouridine synthase (Dus) G3580_11580 PF03960 ArsC family G3580_11585 PF01197 Ribosomal protein L31 G3580_11595 PF00929 Exonuclease G3580_11600 PF01435 Peptidase family M48 G3580_11610 PF03193 RsgA GTPase G3580_11615 PF00108 Thiolase, N-terminal domain G3580_11615 PF02803 Thiolase, C-terminal domain G3580_11620 PF03186 CobD/Cbib protein G3580_11620 PF17113 Regulatory signalling modulator protein AmpE G3580_11640 PF04461 Protein of unknown function (DUF520) G3580_11645 PF06865 Pyrimidine/purine nucleoside phosphorylase G3580_11655 PF00764 Arginosuccinate synthase G3580_11660 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain G3580_11660 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain G3580_11665 PF00202 Aminotransferase class-III G3580_11675 PF01649 Ribosomal protein S20 G3580_11680 PF03023 Lipid II flippase MurJ G3580_11685 PF01161 Phosphatidylethanolamine-binding protein G3580_11695 PF00365 Phosphofructokinase G3580_11700 PF05191 Adenylate kinase, active site lid G3580_11705 PF02348 Cytidylyltransferase G3580_11710 PF03966 Trm112p-like protein G3580_11715 PF02606 Tetraacyldisaccharide-1-P 4'-kinase G3580_11720 PF02472 Biopolymer transport protein ExbD/TolR G3580_11725 PF01618 MotA/TolQ/ExbB proton channel family G3580_11730 PF02601 Exonuclease VII, large subunit G3580_11730 PF13742 OB-fold nucleic acid binding domain G3580_11735 PF02777 Iron/manganese superoxide dismutases, C-terminal domain G3580_11735 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain G3580_11740 PF04542 Sigma-70 region 2 G3580_11740 PF08281 Sigma-70, region 4 G3580_11750 PF00849 RNA pseudouridylate synthase G3580_11750 PF04287 tRNA pseudouridine synthase C G3580_11780 PF00360 Phytochrome region G3580_11780 PF00563 EAL domain G3580_11780 PF00990 Diguanylate cyclase, GGDEF domain G3580_11780 PF01590 GAF domain G3580_11785 PF06965 Na+/H+ antiporter 1 G3580_11795 PF01176 Translation initiation factor 1A / IF-1 G3580_11800 PF00403 Heavy-metal-associated domain G3580_11800 PF07992 Pyridine nucleotide-disulphide oxidoreductase G3580_11800 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain G3580_11830 PF00923 Transaldolase/Fructose-6-phosphate aldolase G3580_11840 PF01627 Hpt domain G3580_11840 PF02895 Signal transducing histidine kinase, homodimeric domain G3580_11840 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase G3580_11840 PF00072 Response regulator receiver domain G3580_11840 PF01584 CheW-like domain G3580_11845 PF04344 Chemotaxis phosphatase, CheZ G3580_11850 PF00072 Response regulator receiver domain G3580_11855 PF01584 CheW-like domain G3580_11855 PF00072 Response regulator receiver domain G3580_11860 PF01584 CheW-like domain G3580_11860 PF00072 Response regulator receiver domain G3580_11865 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain G3580_11865 PF08447 PAS fold G3580_11865 PF13426 PAS domain G3580_11870 PF13466 STAS domain G3580_11875 PF00072 Response regulator receiver domain G3580_11875 PF01339 CheB methylesterase G3580_11880 PF03975 CheD chemotactic sensory transduction G3580_11885 PF01739 CheR methyltransferase, SAM binding domain G3580_11885 PF03705 CheR methyltransferase, all-alpha domain G3580_11890 PF08447 PAS fold G3580_11890 PF13426 PAS domain G3580_11890 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain G3580_11895 PF13426 PAS domain G3580_11895 PF08447 PAS fold G3580_11895 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain G3580_11900 PF01584 CheW-like domain G3580_11905 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase G3580_11905 PF02895 Signal transducing histidine kinase, homodimeric domain G3580_11905 PF01627 Hpt domain G3580_11905 PF09078 CheY binding G3580_11905 PF01584 CheW-like domain G3580_11910 PF00072 Response regulator receiver domain G3580_11915 PF00672 HAMP domain G3580_11915 PF16591 Helical bimodular sensor domain G3580_11915 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain G3580_11920 PF13677 Membrane MotB of proton-channel complex MotA/MotB G3580_11920 PF00691 OmpA family G3580_11925 PF01618 MotA/TolQ/ExbB proton channel family G3580_11930 PF05280 Flagellar transcriptional activator (FlhC) G3580_11935 PF05247 Flagellar transcriptional activator (FlhD) G3580_11940 PF00563 EAL domain G3580_11940 PF00990 Diguanylate cyclase, GGDEF domain G3580_11940 PF03707 Bacterial signalling protein N terminal repeat G3580_11945 PF00990 Diguanylate cyclase, GGDEF domain G3580_11945 PF00072 Response regulator receiver domain G3580_11960 PF00999 Sodium/hydrogen exchanger family G3580_11965 PF00849 RNA pseudouridylate synthase G3580_11990 PF00551 Formyl transferase G3580_12000 PF09335 SNARE associated Golgi protein G3580_12005 PF08676 MutL C terminal dimerisation domain G3580_12005 PF01119 DNA mismatch repair protein, C-terminal domain G3580_12035 PF04349 Periplasmic glucan biosynthesis protein, MdoG G3580_12045 PF01627 Hpt domain G3580_12045 PF00512 His Kinase A (phospho-acceptor) domain G3580_12045 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase G3580_12045 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) G3580_12045 PF00072 Response regulator receiver domain G3580_12045 PF00672 HAMP domain G3580_12055 PF00535 Glycosyl transferase family 2 G3580_12075 PF00486 Transcriptional regulatory protein, C terminal G3580_12075 PF00072 Response regulator receiver domain G3580_12080 PF08521 Two-component sensor kinase N-terminal G3580_12080 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase G3580_12080 PF00512 His Kinase A (phospho-acceptor) domain G3580_12095 PF01061 ABC-2 type transporter G3580_12100 PF00005 ABC transporter G3580_12115 PF00158 Sigma-54 interaction domain G3580_12115 PF00072 Response regulator receiver domain G3580_12115 PF02954 Bacterial regulatory protein, Fis family G3580_12125 PF01654 Cytochrome bd terminal oxidase subunit I G3580_12130 PF02322 Cytochrome bd terminal oxidase subunit II G3580_12145 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain G3580_12145 PF00672 HAMP domain G3580_12145 PF12729 Four helix bundle sensory module for signal transduction G3580_12150 PF01206 Sulfurtransferase TusA G3580_12155 PF01435 Peptidase family M48 G3580_12160 PF01967 MoaC family G3580_12165 PF01928 CYTH domain G3580_12195 PF00293 NUDIX domain G3580_12200 PF01063 Amino-transferase class IV G3580_12215 PF00561 alpha/beta hydrolase fold G3580_12220 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III G3580_12220 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II G3580_12220 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I G3580_12220 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain G3580_12225 PF07685 CobB/CobQ-like glutamine amidotransferase domain G3580_12225 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain G3580_12235 PF00512 His Kinase A (phospho-acceptor) domain G3580_12235 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase G3580_12240 PF00072 Response regulator receiver domain G3580_12240 PF00486 Transcriptional regulatory protein, C terminal G3580_12245 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family G3580_12245 PF03466 LysR substrate binding domain G3580_12250 PF00361 Proton-conducting membrane transporter G3580_12250 PF01010 NADH-dehyrogenase subunit F, TMs, (complex I) C-terminus G3580_12250 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus G3580_12255 PF10070 Uncharacterized protein conserved in bacteria (DUF2309) G3580_12270 PF01411 tRNA synthetases class II (A) G3580_12270 PF02272 DHHA1 domain G3580_12270 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain G3580_12280 PF01923 Cobalamin adenosyltransferase G3580_12300 PF04055 Radical SAM superfamily G3580_12315 PF12704 MacB-like periplasmic core domain G3580_12315 PF02687 FtsX-like permease family G3580_12315 PF00005 ABC transporter G3580_12355 PF03176 MMPL family G3580_12365 PF00158 Sigma-54 interaction domain G3580_12365 PF02954 Bacterial regulatory protein, Fis family G3580_12365 PF02830 V4R domain G3580_12365 PF06505 Activator of aromatic catabolism G3580_12370 PF07859 alpha/beta hydrolase fold G3580_12380 PF00817 impB/mucB/samB family G3580_12380 PF11799 impB/mucB/samB family C-terminal domain G3580_12390 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family G3580_12390 PF03466 LysR substrate binding domain G3580_12400 PF17954 Quercetinase C-terminal cupin domain G3580_12400 PF02678 Pirin G3580_12405 PF00999 Sodium/hydrogen exchanger family G3580_12405 PF02254 TrkA-N domain G3580_12410 PF01370 NAD dependent epimerase/dehydratase family G3580_12410 PF02222 ATP-grasp domain G3580_12425 PF00669 Bacterial flagellin N-terminal helical region G3580_12430 PF06429 Flagellar basal body rod FlgEFG protein C-terminal G3580_12430 PF00460 Flagella basal body rod protein G3580_12435 PF10135 Rod binding protein G3580_12435 PF01832 Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase G3580_12440 PF02119 Flagellar P-ring protein G3580_12445 PF02107 Flagellar L-ring protein G3580_12450 PF06429 Flagellar basal body rod FlgEFG protein C-terminal G3580_12450 PF00460 Flagella basal body rod protein G3580_12455 PF00460 Flagella basal body rod protein G3580_12455 PF06429 Flagellar basal body rod FlgEFG protein C-terminal G3580_12460 PF07559 Flagellar basal body protein FlaE G3580_12460 PF00460 Flagella basal body rod protein G3580_12460 PF06429 Flagellar basal body rod FlgEFG protein C-terminal G3580_12465 PF13860 FlgD Ig-like domain G3580_12465 PF13861 FlgD Tudor-like domain G3580_12465 PF03963 Flagellar hook capping protein - N-terminal region G3580_12470 PF06429 Flagellar basal body rod FlgEFG protein C-terminal G3580_12470 PF00460 Flagella basal body rod protein G3580_12475 PF00460 Flagella basal body rod protein G3580_12495 PF01966 HD domain G3580_12500 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase G3580_12500 PF00986 DNA gyrase B subunit, carboxyl terminus G3580_12500 PF00204 DNA gyrase B G3580_12500 PF01751 Toprim domain G3580_12505 PF04014 Antidote-toxin recognition MazE, bacterial antitoxin G3580_12510 PF01850 PIN domain G3580_12515 PF00521 DNA gyrase/topoisomerase IV, subunit A G3580_12525 PF01814 Hemerythrin HHE cation binding domain G3580_12530 PF13677 Membrane MotB of proton-channel complex MotA/MotB G3580_12530 PF00691 OmpA family G3580_12535 PF01618 MotA/TolQ/ExbB proton channel family G3580_12540 PF04539 Sigma-70 region 3 G3580_12540 PF04542 Sigma-70 region 2 G3580_12540 PF04545 Sigma-70, region 4 G3580_12555 PF00771 FHIPEP family G3580_12560 PF01312 FlhB HrpN YscU SpaS Family G3580_12595 PF00772 DnaB-like helicase N terminal domain G3580_12595 PF03796 DnaB-like helicase C terminal domain G3580_12600 PF03948 Ribosomal protein L9, C-terminal domain G3580_12600 PF01281 Ribosomal protein L9, N-terminal domain G3580_12605 PF01084 Ribosomal protein S18 G3580_12615 PF01250 Ribosomal protein S6 G3580_12625 PF01926 50S ribosome-binding GTPase G3580_12625 PF14714 KH-domain-like of EngA bacterial GTPase enzymes, C-terminal G3580_12635 PF00512 His Kinase A (phospho-acceptor) domain G3580_12635 PF01627 Hpt domain G3580_12635 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase G3580_12635 PF00672 HAMP domain G3580_12635 PF00072 Response regulator receiver domain G3580_12645 PF08448 PAS fold G3580_12645 PF00990 Diguanylate cyclase, GGDEF domain G3580_12665 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component G3580_12675 PF03480 Bacterial extracellular solute-binding protein, family 7 G3580_12680 PF00392 Bacterial regulatory proteins, gntR family G3580_12680 PF07702 UTRA domain G3580_12685 PF04909 Amidohydrolase G3580_12690 PF00561 alpha/beta hydrolase fold G3580_12700 PF12706 Beta-lactamase superfamily domain G3580_12710 PF03070 TENA/THI-4/PQQC family G3580_12715 PF05402 Coenzyme PQQ synthesis protein D (PqqD) G3580_12720 PF13186 Iron-sulfur cluster-binding domain G3580_12720 PF04055 Radical SAM superfamily G3580_12725 PF01814 Hemerythrin HHE cation binding domain G3580_12765 PF00111 2Fe-2S iron-sulfur cluster binding domain G3580_12765 PF03473 MOSC domain G3580_12765 PF03476 MOSC N-terminal beta barrel domain G3580_12770 PF12833 Helix-turn-helix domain G3580_12775 PF00171 Aldehyde dehydrogenase family G3580_12820 PF00550 Phosphopantetheine attachment site G3580_12825 PF00501 AMP-binding enzyme G3580_12825 PF13193 AMP-binding enzyme C-terminal domain G3580_12840 PF04244 Deoxyribodipyrimidine photo-lyase-related protein G3580_12850 PF03441 FAD binding domain of DNA photolyase G3580_12850 PF00875 DNA photolyase G3580_12865 PF00781 Diacylglycerol kinase catalytic domain G3580_12890 PF00873 AcrB/AcrD/AcrF family G3580_12895 PF00529 HlyD membrane-fusion protein of T1SS G3580_12895 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion G3580_12900 PF02769 AIR synthase related protein, C-terminal domain G3580_12900 PF00586 AIR synthase related protein, N-terminal domain G3580_12905 PF01594 AI-2E family transporter G3580_12920 PF01743 Poly A polymerase head domain G3580_12920 PF12626 Polymerase A arginine-rich C-terminus G3580_12920 PF12627 Probable RNA and SrmB- binding site of polymerase A G3580_12925 PF01288 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK) G3580_12930 PF01712 Deoxynucleoside kinase G3580_12935 PF02548 Ketopantoate hydroxymethyltransferase G3580_12940 PF02569 Pantoate-beta-alanine ligase G3580_12945 PF08859 DGC domain G3580_12950 PF00571 CBS domain G3580_12955 PF08521 Two-component sensor kinase N-terminal G3580_12955 PF00512 His Kinase A (phospho-acceptor) domain G3580_12955 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase G3580_12960 PF00486 Transcriptional regulatory protein, C terminal G3580_12960 PF00072 Response regulator receiver domain G3580_12985 PF03466 LysR substrate binding domain G3580_12985 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family G3580_12990 PF03601 Conserved hypothetical protein 698 G3580_12995 PF00486 Transcriptional regulatory protein, C terminal G3580_12995 PF00072 Response regulator receiver domain G3580_13010 PF08274 PhnA Zinc-Ribbon G3580_13010 PF03831 PhnA domain G3580_13015 PF13649 Methyltransferase domain G3580_13020 PF03466 LysR substrate binding domain G3580_13020 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family G3580_13030 PF00881 Nitroreductase family G3580_13035 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain G3580_13035 PF13426 PAS domain G3580_13035 PF08447 PAS fold G3580_13065 PF02624 YcaO cyclodehydratase, ATP-ad Mg2+-binding G3580_13065 PF18381 YcaO cyclodehydratase C-terminal domain G3580_13070 PF17432 Domain of unknown function (DUF3458_C) ARM repeats G3580_13070 PF11940 Domain of unknown function (DUF3458) Ig-like fold G3580_13070 PF01433 Peptidase family M1 domain G3580_13075 PF02915 Rubrerythrin G3580_13080 PF13183 4Fe-4S dicluster domain G3580_13080 PF02754 Cysteine-rich domain G3580_13100 PF00300 Histidine phosphatase superfamily (branch 1) G3580_13105 PF00464 Serine hydroxymethyltransferase G3580_13110 PF03477 ATP cone domain G3580_13115 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region G3580_13115 PF01872 RibD C-terminal domain G3580_13120 PF00899 ThiF family G3580_13130 PF13180 PDZ domain G3580_13130 PF03572 Peptidase family S41 G3580_13135 PF01551 Peptidase family M23 G3580_13140 PF00300 Histidine phosphatase superfamily (branch 1) G3580_13150 PF00581 Rhodanese-like domain G3580_13155 PF00462 Glutaredoxin G3580_13160 PF02556 Preprotein translocase subunit SecB G3580_13170 PF07479 NAD-dependent glycerol-3-phosphate dehydrogenase C-terminus G3580_13170 PF01210 NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus G3580_13175 PF00588 SpoU rRNA Methylase family G3580_13180 PF00156 Phosphoribosyl transferase domain G3580_13185 PF06968 Biotin and Thiamin Synthesis associated domain G3580_13185 PF04055 Radical SAM superfamily G3580_13190 PF08241 Methyltransferase domain G3580_13205 PF00490 Delta-aminolevulinic acid dehydratase G3580_13210 PF01926 50S ribosome-binding GTPase G3580_13215 PF13442 Cytochrome C oxidase, cbb3-type, subunit III G3580_13220 PF04305 Protein of unknown function (DUF455) G3580_13225 PF02978 Signal peptide binding domain G3580_13225 PF00448 SRP54-type protein, GTPase domain G3580_13225 PF02881 SRP54-type protein, helical bundle domain G3580_13235 PF01595 Cyclin M transmembrane N-terminal domain G3580_13235 PF03471 Transporter associated domain G3580_13235 PF00571 CBS domain G3580_13240 PF00437 Type II/IV secretion system protein G3580_13240 PF05157 Type II secretion system (T2SS), protein E, N-terminal domain G3580_13245 PF00482 Type II secretion system (T2SS), protein F G3580_13250 PF01478 Type IV leader peptidase family G3580_13250 PF06750 Bacterial Peptidase A24 N-terminal domain G3580_13265 PF00152 tRNA synthetases class II (D, K and N) G3580_13265 PF01336 OB-fold nucleic acid binding domain G3580_13265 PF02938 GAD domain G3580_13275 PF00545 ribonuclease G3580_13285 PF00293 NUDIX domain G3580_13290 PF00011 Hsp20/alpha crystallin family G3580_13300 PF00696 Amino acid kinase family G3580_13315 PF00501 AMP-binding enzyme G3580_13315 PF13193 AMP-binding enzyme C-terminal domain G3580_13325 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain G3580_13325 PF02787 Carbamoyl-phosphate synthetase large chain, oligomerisation domain G3580_13330 PF00535 Glycosyl transferase family 2 G3580_13350 PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain G3580_13350 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain G3580_13355 PF00733 Asparagine synthase G3580_13355 PF13537 Glutamine amidotransferase domain G3580_13360 PF01757 Acyltransferase family G3580_13365 PF00009 Elongation factor Tu GTP binding domain G3580_13370 PF01507 Phosphoadenosine phosphosulfate reductase family G3580_13375 PF00459 Inositol monophosphatase family G3580_13380 PF03600 Citrate transporter G3580_13380 PF02080 TrkA-C domain G3580_13420 PF13439 Glycosyltransferase Family 4 G3580_13420 PF00534 Glycosyl transferases group 1 G3580_13430 PF00733 Asparagine synthase G3580_13430 PF13537 Glutamine amidotransferase domain G3580_13435 PF13439 Glycosyltransferase Family 4 G3580_13435 PF00534 Glycosyl transferases group 1 G3580_13460 PF02350 UDP-N-acetylglucosamine 2-epimerase G3580_13465 PF13401 AAA domain G3580_13465 PF01471 Putative peptidoglycan binding domain G3580_13475 PF13614 AAA domain G3580_13500 PF00005 ABC transporter G3580_13510 PF13609 Gram-negative porin G3580_13520 PF01619 Proline dehydrogenase G3580_13520 PF00171 Aldehyde dehydrogenase family G3580_13520 PF14850 DNA-binding domain of Proline dehydrogenase G3580_13520 PF18327 Proline utilization A proline dehydrogenase N-terminal domain G3580_13530 PF01266 FAD dependent oxidoreductase G3580_13535 PF01814 Hemerythrin HHE cation binding domain G3580_13540 PF00534 Glycosyl transferases group 1 G3580_13540 PF13439 Glycosyltransferase Family 4 G3580_13545 PF04386 Stringent starvation protein B G3580_13550 PF02798 Glutathione S-transferase, N-terminal domain G3580_13550 PF00043 Glutathione S-transferase, C-terminal domain G3580_13555 PF02167 Cytochrome C1 family G3580_13560 PF00032 Cytochrome b(C-terminal)/b6/petD G3580_13560 PF00033 Cytochrome b/b6/petB G3580_13565 PF10399 Ubiquitinol-cytochrome C reductase Fe-S subunit TAT signal G3580_13565 PF00355 Rieske [2Fe-2S] domain G3580_13570 PF02515 CoA-transferase family III G3580_13575 PF13662 Toprim domain G3580_13575 PF02132 RecR protein G3580_13580 PF02575 YbaB/EbfC DNA-binding family G3580_13585 PF12168 DNA polymerase III subunits tau domain IV DnaB-binding G3580_13585 PF12169 DNA polymerase III subunits gamma and tau domain III G3580_13585 PF12170 DNA polymerase III tau subunit V interacting with alpha G3580_13590 PF02535 ZIP Zinc transporter G3580_13600 PF00501 AMP-binding enzyme G3580_13600 PF13193 AMP-binding enzyme C-terminal domain G3580_13605 PF08032 RNA 2'-O ribose methyltransferase substrate binding G3580_13605 PF00588 SpoU rRNA Methylase family G3580_13610 PF17876 Cold shock domain G3580_13610 PF08461 Ribonuclease R winged-helix domain G3580_13610 PF08206 Ribonuclease B OB domain G3580_13610 PF00773 RNB domain G3580_13610 PF00575 S1 RNA binding domain G3580_13625 PF00709 Adenylosuccinate synthetase G3580_13630 PF13393 Histidyl-tRNA synthetase G3580_13640 PF01145 SPFH domain / Band 7 family G3580_13645 PF01145 SPFH domain / Band 7 family G3580_13645 PF12221 Bacterial membrane protein N terminal G3580_13650 PF13167 GTP-binding GTPase N-terminal G3580_13650 PF16360 GTP-binding GTPase Middle Region G3580_13650 PF01926 50S ribosome-binding GTPase G3580_13655 PF17209 Hfq protein G3580_13660 PF01926 50S ribosome-binding GTPase G3580_13660 PF14714 KH-domain-like of EngA bacterial GTPase enzymes, C-terminal G3580_13665 PF13360 PQQ-like domain G3580_13675 PF13393 Histidyl-tRNA synthetase G3580_13675 PF03129 Anticodon binding domain G3580_13680 PF04551 GcpE protein G3580_13695 PF04055 Radical SAM superfamily G3580_13700 PF00334 Nucleoside diphosphate kinase G3580_13705 PF03480 Bacterial extracellular solute-binding protein, family 7 G3580_13710 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase G3580_13710 PF00989 PAS fold G3580_13710 PF00512 His Kinase A (phospho-acceptor) domain G3580_13715 PF00072 Response regulator receiver domain G3580_13715 PF00196 Bacterial regulatory proteins, luxR family G3580_13725 PF03255 Acetyl co-enzyme A carboxylase carboxyltransferase alpha subunit G3580_13735 PF03481 Putative GTP-binding controlling metal-binding G3580_13735 PF01300 Telomere recombination G3580_13740 PF02222 ATP-grasp domain G3580_13740 PF17769 Phosphoribosylaminoimidazole carboxylase C-terminal domain G3580_13745 PF00731 AIR carboxylase G3580_13750 PF00763 Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain G3580_13750 PF02882 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain G3580_13755 PF00072 Response regulator receiver domain G3580_13755 PF00196 Bacterial regulatory proteins, luxR family G3580_13760 PF00512 His Kinase A (phospho-acceptor) domain G3580_13760 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase G3580_13760 PF00989 PAS fold G3580_13770 PF17831 Pyruvate dehydrogenase E1 component middle domain G3580_13770 PF00456 Transketolase, thiamine diphosphate binding domain G3580_13775 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) G3580_13775 PF02817 e3 binding domain G3580_13775 PF00364 Biotin-requiring enzyme G3580_13780 PF07992 Pyridine nucleotide-disulphide oxidoreductase G3580_13780 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain G3580_13810 PF07992 Pyridine nucleotide-disulphide oxidoreductase G3580_13815 PF03169 OPT oligopeptide transporter protein G3580_13825 PF04290 Tripartite ATP-independent periplasmic transporters, DctQ component G3580_13830 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component G3580_13835 PF00990 Diguanylate cyclase, GGDEF domain G3580_13845 PF12849 PBP superfamily domain G3580_13850 PF00005 ABC transporter G3580_13855 PF00528 Binding-protein-dependent transport system inner membrane component G3580_13875 PF01314 Aldehyde ferredoxin oxidoreductase, domains 2 & 3 G3580_13875 PF02730 Aldehyde ferredoxin oxidoreductase, N-terminal domain G3580_13880 PF13247 4Fe-4S dicluster domain G3580_13885 PF03454 MoeA C-terminal region (domain IV) G3580_13885 PF00994 Probable molybdopterin binding domain G3580_13885 PF03453 MoeA N-terminal region (domain I and II) G3580_13890 PF04972 BON domain G3580_13890 PF00691 OmpA family G3580_13895 PF00180 Isocitrate/isopropylmalate dehydrogenase G3580_13905 PF06315 Isocitrate dehydrogenase kinase/phosphatase (AceK) G3580_13915 PF04143 Sulphur transport G3580_13920 PF00583 Acetyltransferase (GNAT) family G3580_13955 PF13442 Cytochrome C oxidase, cbb3-type, subunit III G3580_13960 PF00174 Oxidoreductase molybdopterin binding domain G3580_13965 PF01022 Bacterial regulatory protein, arsR family G3580_13975 PF07992 Pyridine nucleotide-disulphide oxidoreductase G3580_13975 PF09242 Flavocytochrome c sulphide dehydrogenase, flavin-binding G3580_13975 PF10518 TAT (twin-arginine translocation) pathway signal sequence G3580_13980 PF13442 Cytochrome C oxidase, cbb3-type, subunit III G3580_13985 PF00293 NUDIX domain G3580_13985 PF13344 Haloacid dehalogenase-like hydrolase G3580_13990 PF00692 dUTPase G3580_13995 PF04127 DNA / pantothenate metabolism flavoprotein G3580_13995 PF02441 Flavoprotein G3580_14000 PF04002 RadC-like JAB domain G3580_14005 PF00830 Ribosomal L28 family G3580_14010 PF00471 Ribosomal protein L33 G3580_14015 PF00313 'Cold-shock' DNA-binding domain G3580_14020 PF02617 ATP-dependent Clp protease adaptor protein ClpS G3580_14025 PF00004 ATPase family associated with various cellular activities (AAA) G3580_14025 PF02861 Clp amino terminal domain, pathogenicity island component G3580_14025 PF17871 AAA lid domain G3580_14025 PF07724 AAA domain (Cdc48 subfamily) G3580_14025 PF10431 C-terminal, D2-small domain, of ClpB protein G3580_14030 PF03737 Aldolase/RraA G3580_14035 PF00463 Isocitrate lyase family G3580_14040 PF00990 Diguanylate cyclase, GGDEF domain G3580_14040 PF00563 EAL domain G3580_14040 PF00360 Phytochrome region G3580_14040 PF01590 GAF domain G3580_14045 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain G3580_14045 PF12729 Four helix bundle sensory module for signal transduction G3580_14045 PF00672 HAMP domain G3580_14055 PF16901 C-terminal domain of alpha-glycerophosphate oxidase G3580_14055 PF01266 FAD dependent oxidoreductase G3580_14060 PF00370 FGGY family of carbohydrate kinases, N-terminal domain G3580_14060 PF02782 FGGY family of carbohydrate kinases, C-terminal domain G3580_14070 PF00226 DnaJ domain G3580_14070 PF01556 DnaJ C terminal domain G3580_14080 PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain G3580_14080 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain G3580_14085 PF00730 HhH-GPD superfamily base excision DNA repair protein G3580_14085 PF02805 Metal binding domain of Ada G3580_14085 PF12833 Helix-turn-helix domain G3580_14085 PF06029 AlkA N-terminal domain G3580_14090 PF07694 5TMR of 5TMR-LYT G3580_14090 PF00990 Diguanylate cyclase, GGDEF domain G3580_14095 PF01625 Peptide methionine sulfoxide reductase G3580_14100 PF01641 SelR domain G3580_14110 PF05114 Protein of unknown function (DUF692) G3580_14120 PF00563 EAL domain G3580_14120 PF00990 Diguanylate cyclase, GGDEF domain G3580_14120 PF08448 PAS fold G3580_14125 PF00005 ABC transporter G3580_14130 PF00528 Binding-protein-dependent transport system inner membrane component G3580_14135 PF00528 Binding-protein-dependent transport system inner membrane component G3580_14140 PF12849 PBP superfamily domain G3580_14145 PF00892 EamA-like transporter family G3580_14155 PF00581 Rhodanese-like domain G3580_14165 PF00291 Pyridoxal-phosphate dependent enzyme G3580_14170 PF09905 DNA-binding protein VF530 G3580_14175 PF01177 Asp/Glu/Hydantoin racemase G3580_14180 PF08331 Domain of unknown function (DUF1730) G3580_14185 PF02367 Threonylcarbamoyl adenosine biosynthesis protein TsaE G3580_14190 PF11741 AMIN domain G3580_14190 PF01520 N-acetylmuramoyl-L-alanine amidase G3580_14195 PF10017 Histidine-specific methyltransferase, SAM-dependent G3580_14200 PF03781 Sulfatase-modifying factor enzyme 1 G3580_14200 PF12867 DinB superfamily G3580_14205 PF06574 FAD synthetase G3580_14205 PF01687 Riboflavin kinase G3580_14210 PF08264 Anticodon-binding domain of tRNA G3580_14210 PF00133 tRNA synthetases class I (I, L, M and V) G3580_14210 PF06827 Zinc finger found in FPG and IleRS G3580_14215 PF01252 Signal peptidase (SPase) II G3580_14220 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase G3580_14225 PF02401 LytB protein G3580_14235 PF02609 Exonuclease VII small subunit G3580_14240 PF00348 Polyprenyl synthetase G3580_14245 PF13292 1-deoxy-D-xylulose-5-phosphate synthase G3580_14245 PF02779 Transketolase, pyrimidine binding domain G3580_14245 PF02780 Transketolase, C-terminal domain G3580_14250 PF02649 Type I GTP cyclohydrolase folE2 G3580_14285 PF00579 tRNA synthetases class I (W and Y) G3580_14285 PF01479 S4 domain G3580_14290 PF01551 Peptidase family M23 G3580_14295 PF01521 Iron-sulphur cluster biosynthesis G3580_14300 PF00380 Ribosomal protein S9/S16 G3580_14305 PF00572 Ribosomal protein L13 G3580_14310 PF02566 OsmC-like protein G3580_14315 PF03232 Ubiquinone biosynthesis protein COQ7 G3580_14325 PF00293 NUDIX domain G3580_14330 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) G3580_14330 PF03129 Anticodon binding domain G3580_14330 PF04073 Aminoacyl-tRNA editing domain G3580_14335 PF01464 Transglycosylase SLT domain G3580_14335 PF11873 Membrane-bound lytic murein transglycosylase C, N-terminal domain G3580_14345 PF04055 Radical SAM superfamily G3580_14355 PF01523 Putative modulator of DNA gyrase G3580_14360 PF00795 Carbon-nitrogen hydrolase G3580_14370 PF03710 Glutamate-ammonia ligase adenylyltransferase G3580_14370 PF08335 GlnD PII-uridylyltransferase G3580_14380 PF00348 Polyprenyl synthetase G3580_14390 PF13416 Bacterial extracellular solute-binding protein G3580_14400 PF00563 EAL domain G3580_14400 PF13188 PAS domain G3580_14400 PF03707 Bacterial signalling protein N terminal repeat G3580_14400 PF00990 Diguanylate cyclase, GGDEF domain G3580_14405 PF11871 Domain of unknown function (DUF3391) G3580_14405 PF01966 HD domain G3580_14410 PF00248 Aldo/keto reductase family G3580_14415 PF18125 RlmM ferredoxin-like domain G3580_14415 PF01728 FtsJ-like methyltransferase G3580_14420 PF00271 Helicase conserved C-terminal domain G3580_14420 PF00270 DEAD/DEAH box helicase G3580_14425 PF03707 Bacterial signalling protein N terminal repeat G3580_14425 PF00990 Diguanylate cyclase, GGDEF domain G3580_14425 PF00563 EAL domain G3580_14430 PF02233 NAD(P) transhydrogenase beta subunit G3580_14435 PF12769 4TM region of pyridine nucleotide transhydrogenase, mitoch G3580_14440 PF01262 Alanine dehydrogenase/PNT, C-terminal domain G3580_14440 PF05222 Alanine dehydrogenase/PNT, N-terminal domain G3580_14450 PF00013 KH domain G3580_14450 PF01966 HD domain G3580_14450 PF12072 Domain of unknown function (DUF3552) G3580_14455 PF02754 Cysteine-rich domain G3580_14455 PF13183 4Fe-4S dicluster domain G3580_14460 PF01565 FAD binding domain G3580_14465 PF02913 FAD linked oxidases, C-terminal domain G3580_14465 PF01565 FAD binding domain G3580_14470 PF00392 Bacterial regulatory proteins, gntR family G3580_14470 PF07729 FCD domain G3580_14475 PF00916 Sulfate permease family G3580_14475 PF01740 STAS domain G3580_14480 PF00829 Ribosomal prokaryotic L21 protein G3580_14485 PF01016 Ribosomal L27 protein G3580_14490 PF01926 50S ribosome-binding GTPase G3580_14490 PF01018 GTP1/OBG G3580_14495 PF01472 PUA domain G3580_14495 PF00696 Amino acid kinase family G3580_14510 PF00534 Glycosyl transferases group 1 G3580_14520 PF14461 Prokaryotic E2 family B G3580_14520 PF00899 ThiF family G3580_14525 PF12704 MacB-like periplasmic core domain G3580_14525 PF02687 FtsX-like permease family G3580_14540 PF16177 Acetyl-coenzyme A synthetase N-terminus G3580_14540 PF00501 AMP-binding enzyme G3580_14540 PF13193 AMP-binding enzyme C-terminal domain G3580_14545 PF00072 Response regulator receiver domain G3580_14545 PF00486 Transcriptional regulatory protein, C terminal G3580_14550 PF08240 Alcohol dehydrogenase GroES-like domain G3580_14550 PF00107 Zinc-binding dehydrogenase G3580_14560 PF04011 LemA family G3580_14580 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain G3580_14580 PF08447 PAS fold G3580_14590 PF01464 Transglycosylase SLT domain G3580_14595 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain G3580_14595 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain G3580_14595 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain G3580_14605 PF00158 Sigma-54 interaction domain G3580_14605 PF00072 Response regulator receiver domain G3580_14605 PF02954 Bacterial regulatory protein, Fis family G3580_14610 PF00512 His Kinase A (phospho-acceptor) domain G3580_14610 PF00989 PAS fold G3580_14610 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase G3580_14615 PF02397 Bacterial sugar transferase G3580_14620 PF00072 Response regulator receiver domain G3580_14625 PF07859 alpha/beta hydrolase fold G3580_14635 PF02547 Queuosine biosynthesis protein G3580_14640 PF01702 Queuine tRNA-ribosyltransferase G3580_14645 PF02699 Preprotein translocase subunit G3580_14650 PF07549 SecD/SecF GG Motif G3580_14650 PF13721 SecD export protein N-terminal TM region G3580_14650 PF02355 Protein export membrane protein G3580_14660 PF07549 SecD/SecF GG Motif G3580_14660 PF02355 Protein export membrane protein G3580_14675 PF08328 Adenylosuccinate lyase C-terminal G3580_14675 PF00206 Lyase G3580_14680 PF00114 Pilin (bacterial filament) G3580_14680 PF07963 Prokaryotic N-terminal methylation motif G3580_14685 PF00437 Type II/IV secretion system protein G3580_14685 PF05157 Type II secretion system (T2SS), protein E, N-terminal domain G3580_14690 PF12706 Beta-lactamase superfamily domain G3580_14695 PF00498 FHA domain G3580_14705 PF00549 CoA-ligase G3580_14705 PF02629 CoA binding domain G3580_14710 PF08442 ATP-grasp domain G3580_14710 PF00549 CoA-ligase G3580_14730 PF01784 NIF3 (NGG1p interacting factor 3) G3580_14735 PF13180 PDZ domain G3580_14735 PF17820 PDZ domain G3580_14740 PF00902 Sec-independent protein translocase protein (TatC) G3580_14745 PF02416 mttA/Hcf106 family G3580_14750 PF02416 mttA/Hcf106 family G3580_14760 PF01503 Phosphoribosyl-ATP pyrophosphohydrolase G3580_14765 PF01502 Phosphoribosyl-AMP cyclohydrolase G3580_14770 PF00977 Histidine biosynthesis protein G3580_14775 PF00977 Histidine biosynthesis protein G3580_14780 PF00117 Glutamine amidotransferase class-I G3580_14785 PF00475 Imidazoleglycerol-phosphate dehydratase G3580_14790 PF00155 Aminotransferase class I and II G3580_14795 PF00815 Histidinol dehydrogenase G3580_14800 PF01634 ATP phosphoribosyltransferase G3580_14805 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) G3580_14810 PF01722 BolA-like protein G3580_14815 PF01061 ABC-2 type transporter G3580_14820 PF00005 ABC transporter G3580_14835 PF04333 MlaA lipoprotein G3580_14840 PF02470 MlaD protein G3580_14845 PF02405 Permease MlaE G3580_14850 PF00005 ABC transporter G3580_14855 PF00158 Sigma-54 interaction domain G3580_14855 PF00072 Response regulator receiver domain G3580_14855 PF02954 Bacterial regulatory protein, Fis family G3580_14865 PF03958 Bacterial type II/III secretion system short domain G3580_14865 PF00263 Bacterial type II and III secretion system protein G3580_14875 PF00437 Type II/IV secretion system protein G3580_14880 PF00482 Type II secretion system (T2SS), protein F G3580_14905 PF08334 Type II secretion system (T2SS), protein G G3580_14905 PF07963 Prokaryotic N-terminal methylation motif G3580_14910 PF00211 Adenylate and Guanylate cyclase catalytic domain G3580_14925 PF02080 TrkA-C domain G3580_14925 PF02254 TrkA-N domain G3580_14925 PF00999 Sodium/hydrogen exchanger family G3580_14930 PF01380 SIS domain G3580_14930 PF00571 CBS domain G3580_14940 PF03968 OstA-like protein G3580_14945 PF00378 Enoyl-CoA hydratase/isomerase G3580_14955 PF01553 Acyltransferase G3580_14965 PF05746 DALR anticodon binding domain G3580_14965 PF02092 Glycyl-tRNA synthetase beta subunit G3580_14970 PF02091 Glycyl-tRNA synthetase alpha subunit G3580_14975 PF00689 Cation transporting ATPase, C-terminus G3580_14975 PF00690 Cation transporter/ATPase, N-terminus G3580_14980 PF00795 Carbon-nitrogen hydrolase G3580_14985 PF00571 CBS domain G3580_14985 PF03471 Transporter associated domain G3580_14990 PF02130 Uncharacterized protein family UPF0054 G3580_14995 PF02562 PhoH-like protein G3580_15000 PF04055 Radical SAM superfamily G3580_15000 PF01938 TRAM domain G3580_15000 PF00919 Uncharacterized protein family UPF0004 G3580_15015 PF01381 Helix-turn-helix G3580_15025 PF00440 Bacterial regulatory proteins, tetR family G3580_15025 PF13977 BetI-type transcriptional repressor, C-terminal G3580_15030 PF00529 HlyD membrane-fusion protein of T1SS G3580_15030 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion G3580_15035 PF00873 AcrB/AcrD/AcrF family G3580_15040 PF02321 Outer membrane efflux protein G3580_15045 PF01226 Formate/nitrite transporter G3580_15050 PF00069 Protein kinase domain G3580_15050 PF03793 PASTA domain G3580_15060 PF00268 Ribonucleotide reductase, small chain G3580_15065 PF03477 ATP cone domain G3580_15065 PF02867 Ribonucleotide reductase, barrel domain G3580_15065 PF00317 Ribonucleotide reductase, all-alpha domain G3580_15070 PF13291 ACT domain G3580_15070 PF00291 Pyridoxal-phosphate dependent enzyme G3580_15080 PF02630 SCO1/SenC G3580_15090 PF18331 PKHD-type hydroxylase C-terminal domain G3580_15090 PF13640 2OG-Fe(II) oxygenase superfamily G3580_15095 PF01070 FMN-dependent dehydrogenase G3580_15100 PF07715 TonB-dependent Receptor Plug Domain G3580_15100 PF00593 TonB dependent receptor G3580_15105 PF02874 ATP synthase alpha/beta family, beta-barrel domain G3580_15105 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain G3580_15110 PF00401 ATP synthase, Delta/Epsilon chain, long alpha-helix domain G3580_15110 PF02823 ATP synthase, Delta/Epsilon chain, beta-sandwich domain G3580_15120 PF00119 ATP synthase A chain G3580_15125 PF00137 ATP synthase subunit C G3580_15130 PF00213 ATP synthase delta (OSCP) subunit G3580_15130 PF00430 ATP synthase B/B' CF(0) G3580_15135 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain G3580_15135 PF00306 ATP synthase alpha/beta chain, C terminal domain G3580_15145 PF13289 SIR2-like domain G3580_15150 PF01339 CheB methylesterase G3580_15150 PF01739 CheR methyltransferase, SAM binding domain G3580_15150 PF03705 CheR methyltransferase, all-alpha domain G3580_15150 PF08448 PAS fold G3580_15165 PF03350 Uncharacterized protein family, UPF0114 G3580_15175 PF02913 FAD linked oxidases, C-terminal domain G3580_15175 PF01565 FAD binding domain G3580_15200 PF13192 Thioredoxin domain G3580_15200 PF07992 Pyridine nucleotide-disulphide oxidoreductase G3580_15205 PF10417 C-terminal domain of 1-Cys peroxiredoxin G3580_15205 PF00578 AhpC/TSA family G3580_15210 PF01494 FAD binding domain G3580_15215 PF10411 Disulfide bond isomerase protein N-terminus G3580_15215 PF13098 Thioredoxin-like domain G3580_15225 PF00909 Ammonium Transporter Family G3580_15230 PF06725 3D domain G3580_15230 PF03562 MltA specific insert domain G3580_15240 PF00293 NUDIX domain G3580_15245 PF03448 MgtE intracellular N domain G3580_15245 PF00571 CBS domain G3580_15245 PF01769 Divalent cation transporter G3580_15250 PF03884 DNA gyrase inhibitor YacG G3580_15255 PF07072 Cell division protein G3580_15260 PF01121 Dephospho-CoA kinase G3580_15270 PF03309 Type III pantothenate kinase G3580_15280 PF00072 Response regulator receiver domain G3580_15280 PF02954 Bacterial regulatory protein, Fis family G3580_15280 PF00158 Sigma-54 interaction domain G3580_15285 PF00989 PAS fold G3580_15285 PF00512 His Kinase A (phospho-acceptor) domain G3580_15285 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase G3580_15295 PF03951 Glutamine synthetase, beta-Grasp domain G3580_15295 PF00120 Glutamine synthetase, catalytic domain G3580_15305 PF01545 Cation efflux family G3580_15305 PF16916 Dimerisation domain of Zinc Transporter G3580_15315 PF02445 Quinolinate synthetase A protein G3580_15320 PF07883 Cupin domain G3580_15325 PF00016 Ribulose bisphosphate carboxylase large chain, catalytic domain G3580_15330 PF03372 Endonuclease/Exonuclease/phosphatase family G3580_15335 PF13091 PLD-like domain G3580_15340 PF13380 CoA binding domain G3580_15345 PF00749 tRNA synthetases class I (E and Q), catalytic domain G3580_15350 PF00563 EAL domain G3580_15350 PF00990 Diguanylate cyclase, GGDEF domain G3580_15350 PF03707 Bacterial signalling protein N terminal repeat G3580_15355 PF01926 50S ribosome-binding GTPase G3580_15355 PF06071 Protein of unknown function (DUF933) G3580_15360 PF01195 Peptidyl-tRNA hydrolase G3580_15365 PF01386 Ribosomal L25p family G3580_15365 PF14693 Ribosomal protein TL5, C-terminal domain G3580_15370 PF14572 Phosphoribosyl synthetase-associated domain G3580_15370 PF13793 N-terminal domain of ribose phosphate pyrophosphokinase G3580_15380 PF08544 GHMP kinases C terminal G3580_15380 PF00288 GHMP kinases N terminal domain G3580_15385 PF03550 Outer membrane lipoprotein LolB G3580_15395 PF06831 Formamidopyrimidine-DNA glycosylase H2TH domain G3580_15395 PF01149 Formamidopyrimidine-DNA glycosylase N-terminal domain G3580_15395 PF06827 Zinc finger found in FPG and IleRS G3580_15400 PF00350 Dynamin family G3580_15405 PF00037 4Fe-4S binding domain G3580_15410 PF01467 Cytidylyltransferase-like G3580_15420 PF00675 Insulinase (Peptidase family M16) G3580_15420 PF05193 Peptidase M16 inactive domain G3580_15425 PF00675 Insulinase (Peptidase family M16) G3580_15425 PF05193 Peptidase M16 inactive domain G3580_15430 PF00448 SRP54-type protein, GTPase domain G3580_15430 PF02881 SRP54-type protein, helical bundle domain G3580_15435 PF00005 ABC transporter G3580_15440 PF18075 FtsX extracellular domain G3580_15445 PF01627 Hpt domain G3580_15445 PF00989 PAS fold G3580_15445 PF00512 His Kinase A (phospho-acceptor) domain G3580_15445 PF00072 Response regulator receiver domain G3580_15445 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase G3580_15445 PF00497 Bacterial extracellular solute-binding proteins, family 3 G3580_15455 PF00474 Sodium:solute symporter family G3580_15460 PF00929 Exonuclease G3580_15465 PF00072 Response regulator receiver domain G3580_15465 PF00486 Transcriptional regulatory protein, C terminal G3580_15470 PF18698 Histidine kinase sensor domain G3580_15470 PF00989 PAS fold G3580_15470 PF00512 His Kinase A (phospho-acceptor) domain G3580_15470 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase G3580_15470 PF00672 HAMP domain G3580_15480 PF16177 Acetyl-coenzyme A synthetase N-terminus G3580_15480 PF13193 AMP-binding enzyme C-terminal domain G3580_15480 PF00501 AMP-binding enzyme G3580_15525 PF00303 Thymidylate synthase G3580_15530 PF00186 Dihydrofolate reductase G3580_15535 PF03709 Orn/Lys/Arg decarboxylase, N-terminal domain G3580_15535 PF03711 Orn/Lys/Arg decarboxylase, C-terminal domain G3580_15535 PF01276 Orn/Lys/Arg decarboxylase, major domain G3580_15540 PF00692 dUTPase G3580_15545 PF10609 NUBPL iron-transfer P-loop NTPase G3580_15550 PF04972 BON domain G3580_15550 PF00691 OmpA family G3580_15555 PF09334 tRNA synthetases class I (M) G3580_15555 PF01588 Putative tRNA binding domain G3580_15565 PF00708 Acylphosphatase G3580_15570 PF00916 Sulfate permease family G3580_15570 PF01740 STAS domain G3580_15575 PF00563 EAL domain G3580_15575 PF00990 Diguanylate cyclase, GGDEF domain G3580_15575 PF03707 Bacterial signalling protein N terminal repeat G3580_15580 PF07733 Bacterial DNA polymerase III alpha NTPase domain G3580_15580 PF01336 OB-fold nucleic acid binding domain G3580_15580 PF17657 Bacterial DNA polymerase III alpha subunit finger domain G3580_15580 PF02811 PHP domain G3580_15580 PF14579 Helix-hairpin-helix motif G3580_15585 PF13426 PAS domain G3580_15585 PF13581 Histidine kinase-like ATPase domain G3580_15585 PF07568 Histidine kinase G3580_15590 PF03707 Bacterial signalling protein N terminal repeat G3580_15590 PF00990 Diguanylate cyclase, GGDEF domain G3580_15590 PF00563 EAL domain G3580_15595 PF03547 Membrane transport protein G3580_15600 PF01694 Rhomboid family G3580_15605 PF03358 NADPH-dependent FMN reductase G3580_15610 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family G3580_15610 PF03466 LysR substrate binding domain G3580_15615 PF00990 Diguanylate cyclase, GGDEF domain G3580_15615 PF08448 PAS fold G3580_15625 PF00107 Zinc-binding dehydrogenase G3580_15625 PF08240 Alcohol dehydrogenase GroES-like domain G3580_15630 PF02253 Phospholipase A1 G3580_15635 PF00072 Response regulator receiver domain G3580_15635 PF02954 Bacterial regulatory protein, Fis family G3580_15635 PF00158 Sigma-54 interaction domain G3580_15640 PF00158 Sigma-54 interaction domain G3580_15640 PF00072 Response regulator receiver domain G3580_15640 PF02954 Bacterial regulatory protein, Fis family G3580_15645 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase G3580_15645 PF08447 PAS fold G3580_15645 PF08448 PAS fold G3580_15655 PF00390 Malic enzyme, N-terminal domain G3580_15655 PF01515 Phosphate acetyl/butaryl transferase G3580_15655 PF03949 Malic enzyme, NAD binding domain G3580_15660 PF13614 AAA domain G3580_15670 PF01322 Cytochrome C' G3580_15675 PF00072 Response regulator receiver domain G3580_15680 PF00580 UvrD/REP helicase N-terminal domain G3580_15680 PF13361 UvrD-like helicase C-terminal domain G3580_15690 PF00133 tRNA synthetases class I (I, L, M and V) G3580_15690 PF08264 Anticodon-binding domain of tRNA G3580_15690 PF13603 Leucyl-tRNA synthetase, Domain 2 G3580_15690 PF09334 tRNA synthetases class I (M) G3580_15700 PF14840 Processivity clamp loader gamma complex DNA pol III C-term G3580_15700 PF06144 DNA polymerase III, delta subunit G3580_15705 PF00171 Aldehyde dehydrogenase family G3580_15720 PF02899 Phage integrase, N-terminal SAM-like domain G3580_15720 PF00589 Phage integrase family G3580_15725 PF04073 Aminoacyl-tRNA editing domain G3580_15730 PF00816 H-NS histone family G3580_15740 PF02660 Glycerol-3-phosphate acyltransferase G3580_15745 PF00814 Glycoprotease family G3580_15750 PF01165 Ribosomal protein S21 G3580_15760 PF01807 CHC2 zinc finger G3580_15760 PF10410 DnaB-helicase binding domain of primase G3580_15760 PF08275 DNA primase catalytic core, N-terminal domain G3580_15760 PF08278 DNA primase DnaG DnaB-binding G3580_15765 PF04542 Sigma-70 region 2 G3580_15765 PF04545 Sigma-70, region 4 G3580_15765 PF00140 Sigma-70 factor, region 1.2 G3580_15765 PF03979 Sigma-70 factor, region 1.1 G3580_15765 PF04546 Sigma-70, non-essential region G3580_15765 PF04539 Sigma-70 region 3 G3580_15775 PF00563 EAL domain G3580_15775 PF00990 Diguanylate cyclase, GGDEF domain G3580_15775 PF03707 Bacterial signalling protein N terminal repeat G3580_15775 PF13188 PAS domain G3580_15780 PF00072 Response regulator receiver domain G3580_15785 PF00512 His Kinase A (phospho-acceptor) domain G3580_15785 PF01627 Hpt domain G3580_15785 PF00672 HAMP domain G3580_15785 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) G3580_15785 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase G3580_15785 PF00072 Response regulator receiver domain G3580_15790 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily G3580_15800 PF02464 Competence-damaged protein G3580_15800 PF18146 Damage-inducible protein CinA KH domain G3580_15800 PF00994 Probable molybdopterin binding domain G3580_15810 PF04408 Helicase associated domain (HA2) G3580_15810 PF07717 Oligonucleotide/oligosaccharide-binding (OB)-fold G3580_15810 PF00270 DEAD/DEAH box helicase G3580_15810 PF11898 Domain of unknown function (DUF3418) G3580_15810 PF00271 Helicase conserved C-terminal domain G3580_15815 PF02537 CrcB-like protein, Camphor Resistance (CrcB) G3580_15830 PF00563 EAL domain G3580_15830 PF00990 Diguanylate cyclase, GGDEF domain G3580_15830 PF03707 Bacterial signalling protein N terminal repeat G3580_15835 PF00672 HAMP domain G3580_15835 PF00512 His Kinase A (phospho-acceptor) domain G3580_15835 PF00072 Response regulator receiver domain G3580_15835 PF01627 Hpt domain G3580_15835 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase G3580_15835 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) G3580_15845 PF07715 TonB-dependent Receptor Plug Domain G3580_15845 PF00593 TonB dependent receptor G3580_15850 PF00593 TonB dependent receptor G3580_15850 PF07715 TonB-dependent Receptor Plug Domain G3580_15855 PF00749 tRNA synthetases class I (E and Q), catalytic domain G3580_15855 PF03950 tRNA synthetases class I (E and Q), anti-codon binding domain G3580_15865 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion G3580_15870 PF02687 FtsX-like permease family G3580_15870 PF12704 MacB-like periplasmic core domain G3580_15870 PF00005 ABC transporter G3580_15875 PF00005 ABC transporter G3580_15875 PF12704 MacB-like periplasmic core domain G3580_15875 PF02687 FtsX-like permease family G3580_15880 PF02687 FtsX-like permease family G3580_15880 PF00005 ABC transporter G3580_15880 PF12704 MacB-like periplasmic core domain G3580_15885 PF01479 S4 domain G3580_15885 PF00849 RNA pseudouridylate synthase G3580_15890 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus G3580_15890 PF00361 Proton-conducting membrane transporter G3580_15890 PF04039 Domain related to MnhB subunit of Na+/H+ antiporter G3580_15890 PF13244 Domain of unknown function (DUF4040) G3580_15900 PF00361 Proton-conducting membrane transporter G3580_15905 PF00361 Proton-conducting membrane transporter G3580_15910 PF00420 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L G3580_15930 PF01899 Na+/H+ ion antiporter subunit G3580_15935 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain G3580_15935 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain G3580_15940 PF01614 Bacterial transcriptional regulator G3580_15940 PF09339 IclR helix-turn-helix domain G3580_15945 PF00768 D-alanyl-D-alanine carboxypeptidase G3580_15955 PF00390 Malic enzyme, N-terminal domain G3580_15955 PF01515 Phosphate acetyl/butaryl transferase G3580_15955 PF03949 Malic enzyme, NAD binding domain G3580_15960 PF00821 Phosphoenolpyruvate carboxykinase C-terminal P-loop domain G3580_15960 PF17297 Phosphoenolpyruvate carboxykinase N-terminal domain G3580_15965 PF00155 Aminotransferase class I and II G3580_15970 PF01464 Transglycosylase SLT domain G3580_15970 PF11873 Membrane-bound lytic murein transglycosylase C, N-terminal domain G3580_15975 PF04972 BON domain G3580_15975 PF01476 LysM domain G3580_15980 PF01510 N-acetylmuramoyl-L-alanine amidase G3580_15985 PF00158 Sigma-54 interaction domain G3580_15985 PF00072 Response regulator receiver domain G3580_15985 PF02954 Bacterial regulatory protein, Fis family G3580_15990 PF00512 His Kinase A (phospho-acceptor) domain G3580_15990 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase G3580_16000 PF00155 Aminotransferase class I and II G3580_16005 PF01008 Initiation factor 2 subunit family G3580_16010 PF00596 Class II Aldolase and Adducin N-terminal domain G3580_16025 PF00563 EAL domain G3580_16025 PF00990 Diguanylate cyclase, GGDEF domain G3580_16025 PF03707 Bacterial signalling protein N terminal repeat G3580_16030 PF07969 Amidohydrolase family G3580_16035 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase G3580_16035 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase G3580_16040 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase G3580_16040 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase G3580_16045 PF00072 Response regulator receiver domain G3580_16045 PF00512 His Kinase A (phospho-acceptor) domain G3580_16045 PF01627 Hpt domain G3580_16045 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase G3580_16050 PF02885 Glycosyl transferase family, helical bundle domain G3580_16055 PF01568 Molydopterin dinucleotide binding domain G3580_16055 PF00384 Molybdopterin oxidoreductase G3580_16055 PF04879 Molybdopterin oxidoreductase Fe4S4 domain G3580_16055 PF04324 BFD-like [2Fe-2S] binding domain G3580_16065 PF07715 TonB-dependent Receptor Plug Domain G3580_16065 PF00593 TonB dependent receptor G3580_16080 PF12801 4Fe-4S binding domain G3580_16090 PF02600 Disulfide bond formation protein DsbB G3580_16095 PF18267 Rubredoxin NAD+ reductase C-terminal domain G3580_16095 PF07992 Pyridine nucleotide-disulphide oxidoreductase G3580_16095 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain G3580_16095 PF04324 BFD-like [2Fe-2S] binding domain G3580_16095 PF01077 Nitrite and sulphite reductase 4Fe-4S domain G3580_16100 PF00355 Rieske [2Fe-2S] domain G3580_16105 PF07690 Major Facilitator Superfamily G3580_16110 PF03793 PASTA domain G3580_16110 PF00069 Protein kinase domain G3580_16115 PF08376 Nitrate and nitrite sensing G3580_16115 PF03861 ANTAR domain G3580_16135 PF00005 ABC transporter G3580_16140 PF00528 Binding-protein-dependent transport system inner membrane component G3580_16145 PF00005 ABC transporter G3580_16150 PF00072 Response regulator receiver domain G3580_16150 PF00486 Transcriptional regulatory protein, C terminal G3580_16155 PF00990 Diguanylate cyclase, GGDEF domain G3580_16155 PF00072 Response regulator receiver domain G3580_16160 PF00512 His Kinase A (phospho-acceptor) domain G3580_16160 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase G3580_16160 PF00989 PAS fold G3580_16160 PF00072 Response regulator receiver domain G3580_16160 PF00497 Bacterial extracellular solute-binding proteins, family 3 G3580_16160 PF01627 Hpt domain G3580_16170 PF00873 AcrB/AcrD/AcrF family G3580_16180 PF00072 Response regulator receiver domain G3580_16180 PF00486 Transcriptional regulatory protein, C terminal G3580_16185 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase G3580_16185 PF08448 PAS fold G3580_16185 PF00512 His Kinase A (phospho-acceptor) domain G3580_16185 PF16767 Sensor domain of alginate biosynthesis sensor protein KinB G3580_16185 PF00672 HAMP domain G3580_16195 PF01476 LysM domain G3580_16195 PF08525 Opacity-associated protein A N-terminal motif G3580_16195 PF01551 Peptidase family M23 G3580_16200 PF00899 ThiF family G3580_16210 PF00753 Metallo-beta-lactamase superfamily G3580_16220 PF00155 Aminotransferase class I and II G3580_16225 PF08240 Alcohol dehydrogenase GroES-like domain G3580_16225 PF00698 Acyl transferase domain G3580_16225 PF02801 Beta-ketoacyl synthase, C-terminal domain G3580_16225 PF00550 Phosphopantetheine attachment site G3580_16225 PF08659 KR domain G3580_16225 PF00109 Beta-ketoacyl synthase, N-terminal domain G3580_16225 PF16197 Ketoacyl-synthetase C-terminal extension G3580_16225 PF14765 Polyketide synthase dehydratase G3580_16230 PF00436 Single-strand binding protein family G3580_16235 PF07690 Major Facilitator Superfamily G3580_16240 PF17755 UvrA DNA-binding domain G3580_16240 PF17760 UvrA interaction domain G3580_16255 PF16363 GDP-mannose 4,6 dehydratase G3580_16260 PF04314 Copper chaperone PCu(A)C G3580_16265 PF00512 His Kinase A (phospho-acceptor) domain G3580_16265 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase G3580_16270 PF02954 Bacterial regulatory protein, Fis family G3580_16270 PF00072 Response regulator receiver domain G3580_16275 PF01479 S4 domain G3580_16280 PF01196 Ribosomal protein L17 G3580_16285 PF03118 Bacterial RNA polymerase, alpha chain C terminal domain G3580_16285 PF01193 RNA polymerase Rpb3/Rpb11 dimerisation domain G3580_16285 PF01000 RNA polymerase Rpb3/RpoA insert domain G3580_16290 PF01479 S4 domain G3580_16290 PF00163 Ribosomal protein S4/S9 N-terminal domain G3580_16295 PF00411 Ribosomal protein S11 G3580_16300 PF00416 Ribosomal protein S13/S18 G3580_16305 PF00444 Ribosomal protein L36 G3580_16310 PF01176 Translation initiation factor 1A / IF-1 G3580_16315 PF00344 SecY translocase G3580_16320 PF00828 Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27A G3580_16325 PF00327 Ribosomal protein L30p/L7e G3580_16330 PF00333 Ribosomal protein S5, N-terminal domain G3580_16330 PF03719 Ribosomal protein S5, C-terminal domain G3580_16335 PF00861 Ribosomal L18 of archaea, bacteria, mitoch. and chloroplast G3580_16340 PF00347 Ribosomal protein L6 G3580_16345 PF00410 Ribosomal protein S8 G3580_16350 PF00253 Ribosomal protein S14p/S29e G3580_16355 PF00673 ribosomal L5P family C-terminus G3580_16355 PF00281 Ribosomal protein L5 G3580_16360 PF17136 Ribosomal proteins 50S L24/mitochondrial 39S L24 G3580_16365 PF00238 Ribosomal protein L14p/L23e G3580_16370 PF00366 Ribosomal protein S17 G3580_16375 PF00831 Ribosomal L29 protein G3580_16380 PF00252 Ribosomal protein L16p/L10e G3580_16385 PF00189 Ribosomal protein S3, C-terminal domain G3580_16385 PF07650 KH domain G3580_16390 PF00237 Ribosomal protein L22p/L17e G3580_16395 PF00203 Ribosomal protein S19 G3580_16400 PF03947 Ribosomal Proteins L2, C-terminal domain G3580_16400 PF00181 Ribosomal Proteins L2, RNA binding domain G3580_16405 PF00276 Ribosomal protein L23 G3580_16410 PF00573 Ribosomal protein L4/L1 family G3580_16415 PF00297 Ribosomal protein L3 G3580_16420 PF00338 Ribosomal protein S10p/S20e G3580_16425 PF00009 Elongation factor Tu GTP binding domain G3580_16425 PF03144 Elongation factor Tu domain 2 G3580_16425 PF03143 Elongation factor Tu C-terminal domain G3580_16430 PF03144 Elongation factor Tu domain 2 G3580_16430 PF14492 Elongation Factor G, domain II G3580_16430 PF03764 Elongation factor G, domain IV G3580_16430 PF00009 Elongation factor Tu GTP binding domain G3580_16430 PF00679 Elongation factor G C-terminus G3580_16435 PF00177 Ribosomal protein S7p/S5e G3580_16440 PF00164 Ribosomal protein S12/S23 G3580_16445 PF04997 RNA polymerase Rpb1, domain 1 G3580_16445 PF00623 RNA polymerase Rpb1, domain 2 G3580_16445 PF04998 RNA polymerase Rpb1, domain 5 G3580_16445 PF05000 RNA polymerase Rpb1, domain 4 G3580_16445 PF04983 RNA polymerase Rpb1, domain 3 G3580_16450 PF04561 RNA polymerase Rpb2, domain 2 G3580_16450 PF04560 RNA polymerase Rpb2, domain 7 G3580_16450 PF00562 RNA polymerase Rpb2, domain 6 G3580_16450 PF10385 RNA polymerase beta subunit external 1 domain G3580_16450 PF04565 RNA polymerase Rpb2, domain 3 G3580_16450 PF04563 RNA polymerase beta subunit G3580_16455 PF00542 Ribosomal protein L7/L12 C-terminal domain G3580_16455 PF16320 Ribosomal protein L7/L12 dimerisation domain G3580_16460 PF00466 Ribosomal protein L10 G3580_16465 PF00687 Ribosomal protein L1p/L10e family G3580_16470 PF00298 Ribosomal protein L11, RNA binding domain G3580_16470 PF03946 Ribosomal protein L11, N-terminal domain G3580_16475 PF00467 KOW motif G3580_16475 PF02357 Transcription termination factor nusG G3580_16480 PF00584 SecE/Sec61-gamma subunits of protein translocation complex G3580_16490 PF00009 Elongation factor Tu GTP binding domain G3580_16490 PF03143 Elongation factor Tu C-terminal domain G3580_16490 PF03144 Elongation factor Tu domain 2 G3580_16525 PF00072 Response regulator receiver domain G3580_16525 PF00196 Bacterial regulatory proteins, luxR family G3580_16530 PF00593 TonB dependent receptor G3580_16530 PF07715 TonB-dependent Receptor Plug Domain G3580_16540 PF00512 His Kinase A (phospho-acceptor) domain G3580_16540 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase G3580_16540 PF00072 Response regulator receiver domain G3580_16540 PF00672 HAMP domain G3580_16540 PF01627 Hpt domain G3580_16570 PF02515 CoA-transferase family III G3580_16575 PF14535 AMP-binding enzyme C-terminal domain G3580_16575 PF00501 AMP-binding enzyme G3580_16580 PF00005 ABC transporter G3580_16595 PF02653 Branched-chain amino acid transport system / permease component G3580_16600 PF00005 ABC transporter G3580_16600 PF12399 Branched-chain amino acid ATP-binding cassette transporter G3580_16605 PF00501 AMP-binding enzyme G3580_16620 PF03631 Virulence factor BrkB G3580_16630 PF13677 Membrane MotB of proton-channel complex MotA/MotB G3580_16630 PF00691 OmpA family G3580_16655 PF06463 Molybdenum Cofactor Synthesis C G3580_16655 PF04055 Radical SAM superfamily G3580_16660 PF17805 AsnC-like ligand binding domain G3580_16665 PF17805 AsnC-like ligand binding domain G3580_16665 PF13404 AsnC-type helix-turn-helix domain G3580_16670 PF17805 AsnC-like ligand binding domain G3580_16680 PF13442 Cytochrome C oxidase, cbb3-type, subunit III G3580_16685 PF13442 Cytochrome C oxidase, cbb3-type, subunit III G3580_16690 PF13442 Cytochrome C oxidase, cbb3-type, subunit III G3580_16695 PF14824 Sirohaem biosynthesis protein central G3580_16695 PF10414 Sirohaem synthase dimerisation region G3580_16695 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases G3580_16700 PF13442 Cytochrome C oxidase, cbb3-type, subunit III G3580_16715 PF05573 NosL G3580_16720 PF12679 ABC-2 family transporter protein G3580_16725 PF00005 ABC transporter G3580_16730 PF05048 Periplasmic copper-binding protein (NosD) G3580_16740 PF12801 4Fe-4S binding domain G3580_16740 PF04205 FMN-binding domain G3580_16745 PF18764 Nitrous oxide reductase propeller repeat G3580_16745 PF13473 Cupredoxin-like domain G3580_16745 PF18793 Nitrous oxide reductase propeller repeat 2 G3580_16750 PF00034 Cytochrome c G3580_16755 PF00115 Cytochrome C and Quinol oxidase polypeptide I G3580_16760 PF01645 Conserved region in glutamate synthase G3580_16765 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain G3580_16765 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain G3580_16765 PF00205 Thiamine pyrophosphate enzyme, central domain G3580_16770 PF00510 Cytochrome c oxidase subunit III G3580_16780 PF07728 AAA domain (dynein-related subfamily) G3580_16780 PF08406 CbbQ/NirQ/NorQ C-terminal G3580_16810 PF07831 Pyrimidine nucleoside phosphorylase C-terminal domain G3580_16810 PF00591 Glycosyl transferase family, a/b domain G3580_16810 PF02885 Glycosyl transferase family, helical bundle domain G3580_16815 PF00672 HAMP domain G3580_16815 PF01627 Hpt domain G3580_16815 PF00512 His Kinase A (phospho-acceptor) domain G3580_16815 PF00072 Response regulator receiver domain G3580_16815 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase G3580_16815 PF17149 Periplasmic sensor domain found in signal transduction proteins G3580_16820 PF00072 Response regulator receiver domain G3580_16820 PF00672 HAMP domain G3580_16820 PF17149 Periplasmic sensor domain found in signal transduction proteins G3580_16820 PF01627 Hpt domain G3580_16820 PF00512 His Kinase A (phospho-acceptor) domain G3580_16820 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase G3580_16895 PF14497 Glutathione S-transferase, C-terminal domain G3580_16895 PF02798 Glutathione S-transferase, N-terminal domain G3580_16905 PF04209 homogentisate 1,2-dioxygenase G3580_16910 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily G3580_16925 PF11008 Protein of unknown function (DUF2846) G3580_16950 PF02310 B12 binding domain G3580_16950 PF01642 Methylmalonyl-CoA mutase G3580_16955 PF12625 Arabinose-binding domain of AraC transcription regulator, N-term G3580_16955 PF12833 Helix-turn-helix domain G3580_16960 PF13188 PAS domain G3580_16960 PF08448 PAS fold G3580_16960 PF00512 His Kinase A (phospho-acceptor) domain G3580_16960 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase G3580_16960 PF00072 Response regulator receiver domain G3580_16965 PF00486 Transcriptional regulatory protein, C terminal G3580_16965 PF00072 Response regulator receiver domain G3580_16975 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain G3580_16975 PF12729 Four helix bundle sensory module for signal transduction G3580_16975 PF00672 HAMP domain G3580_16980 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family G3580_16980 PF03466 LysR substrate binding domain G3580_16985 PF07690 Major Facilitator Superfamily G3580_16995 PF04055 Radical SAM superfamily G3580_17000 PF02785 Biotin carboxylase C-terminal domain G3580_17000 PF00289 Biotin carboxylase, N-terminal domain G3580_17000 PF00364 Biotin-requiring enzyme G3580_17000 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain G3580_17000 PF18140 Propionyl-coenzyme A carboxylase BT domain G3580_17005 PF01039 Carboxyl transferase domain G3580_17015 PF01642 Methylmalonyl-CoA mutase G3580_17015 PF02310 B12 binding domain G3580_17020 PF07729 FCD domain G3580_17020 PF00392 Bacterial regulatory proteins, gntR family G3580_17025 PF00378 Enoyl-CoA hydratase/isomerase G3580_17030 PF00924 Mechanosensitive ion channel G3580_17040 PF00561 alpha/beta hydrolase fold G3580_17050 PF01925 Sulfite exporter TauE/SafE G3580_17070 PF02687 FtsX-like permease family G3580_17070 PF00005 ABC transporter G3580_17070 PF12704 MacB-like periplasmic core domain G3580_17075 PF00005 ABC transporter G3580_17075 PF02687 FtsX-like permease family G3580_17075 PF12704 MacB-like periplasmic core domain G3580_17080 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion G3580_17085 PF02321 Outer membrane efflux protein G3580_17100 PF07685 CobB/CobQ-like glutamine amidotransferase domain G3580_17100 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain G3580_17105 PF03186 CobD/Cbib protein G3580_17110 PF00155 Aminotransferase class I and II G3580_17115 PF01497 Periplasmic binding protein G3580_17125 PF08502 LeuA allosteric (dimerisation) domain G3580_17125 PF00682 HMGL-like G3580_17130 PF04320 Protein with unknown function (DUF469) G3580_17145 PF07152 YaeQ protein G3580_17150 PF00271 Helicase conserved C-terminal domain G3580_17150 PF00270 DEAD/DEAH box helicase G3580_17155 PF01575 MaoC like domain G3580_17160 PF00216 Bacterial DNA-binding protein G3580_17170 PF01144 Coenzyme A transferase G3580_17175 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component G3580_17185 PF03480 Bacterial extracellular solute-binding protein, family 7 G3580_17190 PF02954 Bacterial regulatory protein, Fis family G3580_17190 PF13185 GAF domain G3580_17190 PF00158 Sigma-54 interaction domain G3580_17195 PF00132 Bacterial transferase hexapeptide (six repeats) G3580_17200 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family G3580_17200 PF03466 LysR substrate binding domain G3580_17210 PF01274 Malate synthase G3580_17225 PF03466 LysR substrate binding domain G3580_17225 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family G3580_17240 PF03795 YCII-related domain G3580_17245 PF04542 Sigma-70 region 2 G3580_17245 PF08281 Sigma-70, region 4 G3580_17265 PF02696 Uncharacterized ACR, YdiU/UPF0061 family G3580_17270 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family G3580_17270 PF03466 LysR substrate binding domain G3580_17275 PF02525 Flavodoxin-like fold G3580_17300 PF13442 Cytochrome C oxidase, cbb3-type, subunit III G3580_17300 PF14715 N-terminal domain of cytochrome oxidase-cbb3, FixP G3580_17300 PF00034 Cytochrome c G3580_17310 PF03707 Bacterial signalling protein N terminal repeat G3580_17310 PF00563 EAL domain G3580_17310 PF00990 Diguanylate cyclase, GGDEF domain G3580_17315 PF00512 His Kinase A (phospho-acceptor) domain G3580_17315 PF00497 Bacterial extracellular solute-binding proteins, family 3 G3580_17315 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase G3580_17325 PF03707 Bacterial signalling protein N terminal repeat G3580_17325 PF00990 Diguanylate cyclase, GGDEF domain G3580_17325 PF00563 EAL domain G3580_17345 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase G3580_17345 PF00989 PAS fold G3580_17345 PF00512 His Kinase A (phospho-acceptor) domain G3580_17350 PF01037 Lrp/AsnC ligand binding domain G3580_17355 PF01266 FAD dependent oxidoreductase G3580_17360 PF00842 Alanine racemase, C-terminal domain G3580_17360 PF01168 Alanine racemase, N-terminal domain G3580_17380 PF07730 Histidine kinase G3580_17380 PF05231 MASE1 G3580_17380 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase G3580_17385 PF00072 Response regulator receiver domain G3580_17385 PF00196 Bacterial regulatory proteins, luxR family G3580_17405 PF16671 Actin cross-linking domain G3580_17405 PF04717 Type VI secretion system, phage-baseplate injector G3580_17420 PF08859 DGC domain G3580_17425 PF00072 Response regulator receiver domain G3580_17425 PF00196 Bacterial regulatory proteins, luxR family G3580_17430 PF13675 Type IV pili methyl-accepting chemotaxis transducer N-term G3580_17430 PF00672 HAMP domain G3580_17430 PF07730 Histidine kinase G3580_17430 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase G3580_17435 PF02665 Nitrate reductase gamma subunit G3580_17440 PF02613 Nitrate reductase delta subunit G3580_17445 PF13247 4Fe-4S dicluster domain G3580_17445 PF14711 Respiratory nitrate reductase beta C-terminal G3580_17450 PF00384 Molybdopterin oxidoreductase G3580_17450 PF01568 Molydopterin dinucleotide binding domain G3580_17450 PF14710 Respiratory nitrate reductase alpha N-terminal G3580_17455 PF07690 Major Facilitator Superfamily G3580_17460 PF07690 Major Facilitator Superfamily G3580_17475 PF01451 Low molecular weight phosphotyrosine protein phosphatase G3580_17480 PF01758 Sodium Bile acid symporter family G3580_17490 PF01590 GAF domain G3580_17490 PF02954 Bacterial regulatory protein, Fis family G3580_17490 PF00158 Sigma-54 interaction domain G3580_17495 PF00171 Aldehyde dehydrogenase family G3580_17510 PF13360 PQQ-like domain G3580_17510 PF13442 Cytochrome C oxidase, cbb3-type, subunit III G3580_17520 PF00072 Response regulator receiver domain G3580_17520 PF00486 Transcriptional regulatory protein, C terminal G3580_17525 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase G3580_17525 PF00512 His Kinase A (phospho-acceptor) domain G3580_17525 PF08521 Two-component sensor kinase N-terminal G3580_17530 PF13180 PDZ domain G3580_17540 PF06472 ABC transporter transmembrane region 2 G3580_17540 PF00005 ABC transporter G3580_17545 PF00072 Response regulator receiver domain G3580_17550 PF00072 Response regulator receiver domain G3580_17565 PF01565 FAD binding domain G3580_17565 PF02873 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain G3580_17590 PF00005 ABC transporter G3580_17590 PF12848 ABC transporter G3580_17615 PF00005 ABC transporter G3580_17615 PF12848 ABC transporter G3580_17625 PF00571 CBS domain G3580_17625 PF00005 ABC transporter G3580_17630 PF00528 Binding-protein-dependent transport system inner membrane component G3580_17635 PF04069 Substrate binding domain of ABC-type glycine betaine transport system G3580_17640 PF00892 EamA-like transporter family G3580_17645 PF01810 LysE type translocator G3580_17660 PF01118 Semialdehyde dehydrogenase, NAD binding domain G3580_17670 PF03466 LysR substrate binding domain G3580_17670 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family G3580_17680 PF00561 alpha/beta hydrolase fold G3580_17685 PF01323 DSBA-like thioredoxin domain G3580_17690 PF00375 Sodium:dicarboxylate symporter family G3580_17695 PF00535 Glycosyl transferase family 2 G3580_17695 PF13181 Tetratricopeptide repeat G3580_17705 PF01476 LysM domain G3580_17730 PF02310 B12 binding domain G3580_17730 PF02607 B12 binding domain G3580_17730 PF02965 Vitamin B12 dependent methionine synthase, activation domain G3580_17730 PF00809 Pterin binding enzyme G3580_17730 PF02574 Homocysteine S-methyltransferase G3580_17750 PF01966 HD domain G3580_17750 PF11871 Domain of unknown function (DUF3391) G3580_17760 PF13458 Periplasmic binding protein G3580_17765 PF01699 Sodium/calcium exchanger protein G3580_17775 PF03865 Haemolysin secretion/activation protein ShlB/FhaC/HecB G3580_17775 PF08479 POTRA domain, ShlB-type G3580_17780 PF01595 Cyclin M transmembrane N-terminal domain G3580_17780 PF03471 Transporter associated domain G3580_17780 PF00571 CBS domain G3580_17790 PF00005 ABC transporter G3580_17795 PF00528 Binding-protein-dependent transport system inner membrane component G3580_17805 PF11953 Domain of unknown function (DUF3470) G3580_17805 PF00037 4Fe-4S binding domain G3580_17820 PF00890 FAD binding domain G3580_17820 PF02910 Fumarate reductase flavoprotein C-term G3580_17825 PF07702 UTRA domain G3580_17825 PF00392 Bacterial regulatory proteins, gntR family G3580_17835 PF03601 Conserved hypothetical protein 698 G3580_17840 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family G3580_17840 PF03466 LysR substrate binding domain G3580_17850 PF07690 Major Facilitator Superfamily G3580_17860 PF00670 S-adenosyl-L-homocysteine hydrolase, NAD binding domain G3580_17860 PF05221 S-adenosyl-L-homocysteine hydrolase G3580_17865 PF00583 Acetyltransferase (GNAT) family G3580_17865 PF00795 Carbon-nitrogen hydrolase G3580_17870 PF00795 Carbon-nitrogen hydrolase G3580_17870 PF00583 Acetyltransferase (GNAT) family G3580_17875 PF01728 FtsJ-like methyltransferase G3580_17875 PF01479 S4 domain G3580_17880 PF02219 Methylenetetrahydrofolate reductase G3580_17885 PF00672 HAMP domain G3580_17885 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase G3580_17885 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) G3580_17885 PF00072 Response regulator receiver domain G3580_17885 PF00512 His Kinase A (phospho-acceptor) domain G3580_17885 PF01627 Hpt domain G3580_17890 PF01053 Cys/Met metabolism PLP-dependent enzyme G3580_17905 PF00174 Oxidoreductase molybdopterin binding domain G3580_17930 PF00892 EamA-like transporter family G3580_17955 PF05872 Bacterial protein of unknown function (DUF853) G3580_17965 PF01709 Transcriptional regulator G3580_17970 PF02653 Branched-chain amino acid transport system / permease component G3580_17975 PF11862 Domain of unknown function (DUF3382) G3580_17975 PF02653 Branched-chain amino acid transport system / permease component G3580_17980 PF12399 Branched-chain amino acid ATP-binding cassette transporter G3580_17980 PF00005 ABC transporter G3580_17985 PF00005 ABC transporter G3580_17990 PF01965 DJ-1/PfpI family G3580_17995 PF01965 DJ-1/PfpI family G3580_17995 PF12833 Helix-turn-helix domain G3580_18015 PF12833 Helix-turn-helix domain G3580_18035 PF03928 Haem-degrading G3580_18055 PF00970 Oxidoreductase FAD-binding domain G3580_18055 PF00175 Oxidoreductase NAD-binding domain G3580_18055 PF00111 2Fe-2S iron-sulfur cluster binding domain G3580_18070 PF00873 AcrB/AcrD/AcrF family G3580_18095 PF07690 Major Facilitator Superfamily G3580_18100 PF13335 Magnesium chelatase, subunit ChlI C-terminal G3580_18100 PF01078 Magnesium chelatase, subunit ChlI G3580_18110 PF00665 Integrase core domain G3580_18185 PF01844 HNH endonuclease G3580_18190 PF00565 Staphylococcal nuclease homologue G3580_18250 PF00899 ThiF family G3580_18250 PF14461 Prokaryotic E2 family B G3580_18260 PF00437 Type II/IV secretion system protein G3580_18260 PF05157 Type II secretion system (T2SS), protein E, N-terminal domain G3580_18270 PF07963 Prokaryotic N-terminal methylation motif G3580_18270 PF08334 Type II secretion system (T2SS), protein G G3580_18305 PF03958 Bacterial type II/III secretion system short domain G3580_18305 PF00263 Bacterial type II and III secretion system protein G3580_18320 PF13683 Integrase core domain G3580_18320 PF13276 HTH-like domain G3580_18325 PF01527 Transposase G3580_18355 PF01207 Dihydrouridine synthase (Dus) G3580_18360 PF04380 Membrane fusogenic activity G3580_18370 PF00543 Nitrogen regulatory protein P-II G3580_18375 PF00909 Ammonium Transporter Family G3580_18380 PF01556 DnaJ C terminal domain G3580_18380 PF00226 DnaJ domain G3580_18390 PF01842 ACT domain G3580_18390 PF00551 Formyl transferase G3580_18405 PF00561 alpha/beta hydrolase fold G3580_18405 PF07021 Methionine biosynthesis protein MetW G3580_18410 PF00561 alpha/beta hydrolase fold G3580_18415 PF05524 PEP-utilising enzyme, N-terminal G3580_18415 PF00391 PEP-utilising enzyme, mobile domain G3580_18415 PF02896 PEP-utilising enzyme, TIM barrel domain G3580_18420 PF00381 PTS HPr component phosphorylation site G3580_18425 PF03610 PTS system fructose IIA component G3580_18430 PF02424 ApbE family G3580_18440 PF05987 Bacterial protein of unknown function (DUF898) G3580_18445 PF02955 Prokaryotic glutathione synthetase, ATP-grasp domain G3580_18445 PF02951 Prokaryotic glutathione synthetase, N-terminal domain G3580_18460 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase G3580_18460 PF00512 His Kinase A (phospho-acceptor) domain G3580_18460 PF13755 Sensor N-terminal transmembrane domain G3580_18460 PF13756 Stimulus-sensing domain G3580_18460 PF00672 HAMP domain G3580_18475 PF00486 Transcriptional regulatory protein, C terminal G3580_18475 PF00072 Response regulator receiver domain G3580_18485 PF04203 Sortase domain G3580_18490 PF13091 PLD-like domain G3580_18495 PF01965 DJ-1/PfpI family G3580_18505 PF14403 Circularly permuted ATP-grasp type 2 G3580_18520 PF03918 Cytochrome C biogenesis protein G3580_18525 PF08534 Redoxin G3580_18530 PF16327 Cytochrome c-type biogenesis protein CcmF C-terminal G3580_18530 PF01578 Cytochrome C assembly protein G3580_18535 PF03100 CcmE G3580_18545 PF01578 Cytochrome C assembly protein G3580_18550 PF03379 CcmB protein G3580_18555 PF00005 ABC transporter G3580_18560 PF08448 PAS fold G3580_18560 PF00990 Diguanylate cyclase, GGDEF domain G3580_18565 PF12833 Helix-turn-helix domain G3580_18575 PF00561 alpha/beta hydrolase fold G3580_18580 PF03264 NapC/NirT cytochrome c family, N-terminal region G3580_18585 PF03892 Nitrate reductase cytochrome c-type subunit (NapB) G3580_18590 PF12801 4Fe-4S binding domain G3580_18590 PF12837 4Fe-4S binding domain G3580_18595 PF12838 4Fe-4S dicluster domain G3580_18595 PF12800 4Fe-4S binding domain G3580_18600 PF01568 Molydopterin dinucleotide binding domain G3580_18600 PF00384 Molybdopterin oxidoreductase G3580_18600 PF04879 Molybdopterin oxidoreductase Fe4S4 domain G3580_18610 PF13247 4Fe-4S dicluster domain G3580_18610 PF09163 Formate dehydrogenase N, transmembrane G3580_18625 PF02824 TGS domain G3580_18625 PF04607 Region found in RelA / SpoT proteins G3580_18625 PF13291 ACT domain G3580_18630 PF01192 RNA polymerase Rpb6 G3580_18635 PF00625 Guanylate kinase G3580_18645 PF00266 Aminotransferase class-V G3580_18650 PF01592 NifU-like N terminal domain G3580_18650 PF01106 NifU-like domain G3580_18650 PF04324 BFD-like [2Fe-2S] binding domain G3580_18655 PF01521 Iron-sulphur cluster biosynthesis G3580_18660 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family G3580_18660 PF03466 LysR substrate binding domain G3580_18670 PF02798 Glutathione S-transferase, N-terminal domain G3580_18685 PF12838 4Fe-4S dicluster domain G3580_18695 PF03270 Protein of unknown function, DUF269 G3580_18705 PF02579 Dinitrogenase iron-molybdenum cofactor G3580_18710 PF00148 Nitrogenase component 1 type Oxidoreductase G3580_18715 PF00148 Nitrogenase component 1 type Oxidoreductase G3580_18720 PF03922 OmpW family G3580_18745 PF03658 RnfH family Ubiquitin G3580_18750 PF02508 Rnf-Nqr subunit, membrane protein G3580_18755 PF04205 FMN-binding domain G3580_18760 PF03116 NQR2, RnfD, RnfE family G3580_18770 PF04060 Putative Fe-S cluster G3580_18775 PF02508 Rnf-Nqr subunit, membrane protein G3580_18780 PF00989 PAS fold G3580_18780 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase G3580_18785 PF02954 Bacterial regulatory protein, Fis family G3580_18785 PF00158 Sigma-54 interaction domain G3580_18785 PF13185 GAF domain G3580_18810 PF00043 Glutathione S-transferase, C-terminal domain G3580_18810 PF02798 Glutathione S-transferase, N-terminal domain G3580_18840 PF00258 Flavodoxin G3580_18850 PF03459 TOBE domain G3580_18850 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family G3580_18855 PF03459 TOBE domain G3580_18855 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family G3580_18865 PF01729 Quinolinate phosphoribosyl transferase, C-terminal domain G3580_18865 PF02749 Quinolinate phosphoribosyl transferase, N-terminal domain G3580_18875 PF00528 Binding-protein-dependent transport system inner membrane component G3580_18880 PF03459 TOBE domain G3580_18880 PF00005 ABC transporter G3580_18890 PF01323 DSBA-like thioredoxin domain G3580_18895 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family G3580_18895 PF03466 LysR substrate binding domain G3580_18900 PF00072 Response regulator receiver domain G3580_18900 PF00196 Bacterial regulatory proteins, luxR family G3580_18905 PF07730 Histidine kinase G3580_18905 PF17200 Single Cache domain 2 G3580_18915 PF05494 MlaC protein G3580_18935 PF13344 Haloacid dehalogenase-like hydrolase G3580_18935 PF00293 NUDIX domain G3580_18940 PF00990 Diguanylate cyclase, GGDEF domain G3580_18940 PF05230 MASE2 domain G3580_18945 PF04055 Radical SAM superfamily G3580_18945 PF02579 Dinitrogenase iron-molybdenum cofactor G3580_18950 PF12838 4Fe-4S dicluster domain G3580_18955 PF03960 ArsC family G3580_18960 PF00258 Flavodoxin G3580_18960 PF00753 Metallo-beta-lactamase superfamily G3580_18965 PF00111 2Fe-2S iron-sulfur cluster binding domain G3580_18970 PF00111 2Fe-2S iron-sulfur cluster binding domain G3580_18975 PF04891 NifQ G3580_18980 PF03747 ADP-ribosylglycohydrolase G3580_18990 PF07311 Dodecin G3580_18995 PF04143 Sulphur transport G3580_19030 PF07992 Pyridine nucleotide-disulphide oxidoreductase G3580_19055 PF07357 Dinitrogenase reductase ADP-ribosyltransferase (DRAT) G3580_19060 PF00142 4Fe-4S iron sulfur cluster binding proteins, NifH/frxC family G3580_19065 PF00148 Nitrogenase component 1 type Oxidoreductase G3580_19070 PF11844 Domain of unknown function (DUF3364) G3580_19070 PF00148 Nitrogenase component 1 type Oxidoreductase G3580_19080 PF00037 4Fe-4S binding domain G3580_19085 PF02579 Dinitrogenase iron-molybdenum cofactor G3580_19085 PF16844 Dinitrogenase iron-molybdenum cofactor, N-terminal G3580_19105 PF01184 GPR1/FUN34/yaaH family G3580_19120 PF00106 short chain dehydrogenase G3580_19130 PF00682 HMGL-like G3580_19135 PF00132 Bacterial transferase hexapeptide (six repeats) G3580_19145 PF03206 Nitrogen fixation protein NifW G3580_19150 PF04319 NifZ domain G3580_19155 PF00639 PPIC-type PPIASE domain G3580_19155 PF09312 SurA N-terminal domain G3580_19165 PF13793 N-terminal domain of ribose phosphate pyrophosphokinase G3580_19165 PF14572 Phosphoribosyl synthetase-associated domain G3580_19180 PF07690 Major Facilitator Superfamily G3580_19185 PF07075 Protein of unknown function (DUF1343) G3580_19195 PF03992 Antibiotic biosynthesis monooxygenase G3580_19205 PF03480 Bacterial extracellular solute-binding protein, family 7 G3580_19215 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component G3580_19220 PF16957 Malonate decarboxylase, alpha subunit, transporter G3580_19225 PF06857 Malonate decarboxylase delta subunit (MdcD) G3580_19230 PF01039 Carboxyl transferase domain G3580_19245 PF01874 ATP:dephospho-CoA triphosphoribosyl transferase G3580_19255 PF13593 SBF-like CPA transporter family (DUF4137) G3580_19270 PF00474 Sodium:solute symporter family G3580_19280 PF04542 Sigma-70 region 2 G3580_19280 PF08281 Sigma-70, region 4 G3580_19335 PF12704 MacB-like periplasmic core domain G3580_19335 PF00005 ABC transporter G3580_19335 PF02687 FtsX-like permease family G3580_19345 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion G3580_19350 PF02666 Phosphatidylserine decarboxylase G3580_19355 PF13419 Haloacid dehalogenase-like hydrolase G3580_19365 PF00563 EAL domain G3580_19365 PF00990 Diguanylate cyclase, GGDEF domain G3580_19365 PF08447 PAS fold G3580_19365 PF08448 PAS fold G3580_19370 PF00689 Cation transporting ATPase, C-terminus G3580_19370 PF00690 Cation transporter/ATPase, N-terminus G3580_19380 PF00849 RNA pseudouridylate synthase G3580_19385 PF00072 Response regulator receiver domain G3580_19390 PF01894 Uncharacterised protein family UPF0047 G3580_19395 PF02082 Transcriptional regulator G3580_19405 PF11953 Domain of unknown function (DUF3470) G3580_19405 PF00037 4Fe-4S binding domain G3580_19415 PF00881 Nitroreductase family G3580_19425 PF16658 Class II release factor RF3, C-terminal domain G3580_19425 PF03144 Elongation factor Tu domain 2 G3580_19425 PF00009 Elongation factor Tu GTP binding domain G3580_19430 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase G3580_19430 PF00672 HAMP domain G3580_19430 PF00072 Response regulator receiver domain G3580_19430 PF00512 His Kinase A (phospho-acceptor) domain G3580_19430 PF01627 Hpt domain G3580_19430 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) G3580_19435 PF00072 Response regulator receiver domain G3580_19440 PF01434 Peptidase family M41 G3580_19440 PF00004 ATPase family associated with various cellular activities (AAA) G3580_19440 PF17862 AAA+ lid domain G3580_19445 PF02682 Carboxyltransferase domain, subdomain C and D G3580_19450 PF02626 Carboxyltransferase domain, subdomain A and B G3580_19455 PF03746 LamB/YcsF family G3580_19465 PF00211 Adenylate and Guanylate cyclase catalytic domain G3580_19465 PF00069 Protein kinase domain G3580_19475 PF00684 DnaJ central domain G3580_19475 PF01556 DnaJ C terminal domain G3580_19475 PF00226 DnaJ domain G3580_19515 PF01636 Phosphotransferase enzyme family G3580_19525 PF02146 Sir2 family G3580_19540 PF00117 Glutamine amidotransferase class-I G3580_19540 PF00988 Carbamoyl-phosphate synthase small chain, CPSase domain G3580_19555 PF00924 Mechanosensitive ion channel G3580_19555 PF05552 Conserved TM helix G3580_19570 PF02639 Uncharacterized BCR, YaiI/YqxD family COG1671 G3580_19575 PF00691 OmpA family G3580_19575 PF13488 Glycine zipper G3580_19580 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase G3580_19580 PF00072 Response regulator receiver domain G3580_19580 PF13426 PAS domain G3580_19585 PF08447 PAS fold G3580_19585 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain G3580_19585 PF13426 PAS domain G3580_19595 PF04381 Putative exonuclease, RdgC G3580_19605 PF01479 S4 domain G3580_19605 PF00849 RNA pseudouridylate synthase G3580_19620 PF01132 Elongation factor P (EF-P) OB domain G3580_19620 PF08207 Elongation factor P (EF-P) KOW-like domain G3580_19620 PF09285 Elongation factor P, C-terminal G3580_19625 PF03466 LysR substrate binding domain G3580_19625 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family G3580_19630 PF08240 Alcohol dehydrogenase GroES-like domain G3580_19630 PF00107 Zinc-binding dehydrogenase G3580_19635 PF00756 Putative esterase G3580_19645 PF07690 Major Facilitator Superfamily G3580_19660 PF00480 ROK family G3580_19665 PF03475 3-alpha domain G3580_19665 PF03473 MOSC domain G3580_19675 PF00271 Helicase conserved C-terminal domain G3580_19675 PF18319 PriA DNA helicase Cys-rich region (CRR) domain G3580_19675 PF17764 3′ DNA-binding domain (3′BD) G3580_19675 PF18074 Primosomal protein N C-terminal domain G3580_19675 PF00270 DEAD/DEAH box helicase G3580_19680 PF01208 Uroporphyrinogen decarboxylase (URO-D) G3580_19685 PF02386 Cation transport protein G3580_19690 PF02386 Cation transport protein G3580_19695 PF02080 TrkA-C domain G3580_19695 PF02254 TrkA-N domain G3580_19700 PF00158 Sigma-54 interaction domain G3580_19700 PF00072 Response regulator receiver domain G3580_19700 PF02954 Bacterial regulatory protein, Fis family G3580_19705 PF00512 His Kinase A (phospho-acceptor) domain G3580_19705 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase G3580_19705 PF00989 PAS fold G3580_19705 PF00672 HAMP domain G3580_19715 PF01029 NusB family G3580_19715 PF01189 16S rRNA methyltransferase RsmB/F G3580_19720 PF17284 Spermidine synthase tetramerisation domain G3580_19725 PF02675 S-adenosylmethionine decarboxylase G3580_19730 PF01925 Sulfite exporter TauE/SafE G3580_19735 PF10396 GTP-binding protein TrmE N-terminus G3580_19735 PF01926 50S ribosome-binding GTPase G3580_19735 PF12631 MnmE helical domain G3580_19740 PF14849 YidC periplasmic domain G3580_19740 PF02096 60Kd inner membrane protein G3580_19745 PF01809 Putative membrane protein insertion efficiency factor G3580_19750 PF00825 Ribonuclease P G3580_19755 PF00468 Ribosomal protein L34