C0099_00010 PF00712 DNA polymerase III beta subunit, N-terminal domain C0099_00010 PF02767 DNA polymerase III beta subunit, central domain C0099_00010 PF02768 DNA polymerase III beta subunit, C-terminal domain C0099_00015 PF00204 DNA gyrase B C0099_00015 PF00986 DNA gyrase B subunit, carboxyl terminus C0099_00015 PF01751 Toprim domain C0099_00015 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase C0099_00020 PF00892 EamA-like transporter family C0099_00025 PF01266 FAD dependent oxidoreductase C0099_00030 PF00593 TonB dependent receptor C0099_00030 PF07715 TonB-dependent Receptor Plug Domain C0099_00035 PF03929 C0099_00035 C0099_00040 PF08668 HDOD domain C0099_00050 PF13532 2OG-Fe(II) oxygenase superfamily C0099_00055 PF01910 Domain of unknown function DUF77 C0099_00060 PF04952 Succinylglutamate desuccinylase / Aspartoacylase family C0099_00070 PF01243 Pyridoxamine 5'-phosphate oxidase C0099_00070 PF13185 GAF domain C0099_00075 PF00676 Dehydrogenase E1 component C0099_00080 PF02779 Transketolase, pyrimidine binding domain C0099_00080 PF02780 Transketolase, C-terminal domain C0099_00090 PF00441 Acyl-CoA dehydrogenase, C-terminal domain C0099_00090 PF02770 Acyl-CoA dehydrogenase, middle domain C0099_00090 PF02771 Acyl-CoA dehydrogenase, N-terminal domain C0099_00095 PF04381 Putative exonuclease, RdgC C0099_00100 PF08982 Domain of unknown function (DUF1857) C0099_00105 PF00849 RNA pseudouridylate synthase C0099_00105 PF01479 S4 domain C0099_00110 PF10093 C0099_00110 C0099_00115 PF01132 Elongation factor P (EF-P) OB domain C0099_00115 PF08207 Elongation factor P (EF-P) KOW-like domain C0099_00115 PF09285 Elongation factor P, C-terminal C0099_00120 PF05128 C0099_00120 C0099_00125 PF01926 50S ribosome-binding GTPase C0099_00125 PF05128 C0099_00125 C0099_00130 PF01926 50S ribosome-binding GTPase C0099_00135 PF00850 Histone deacetylase domain C0099_00140 PF00578 AhpC/TSA family C0099_00140 PF10417 C-terminal domain of 1-Cys peroxiredoxin C0099_00145 PF07992 Pyridine nucleotide-disulphide oxidoreductase C0099_00145 PF13192 Thioredoxin domain C0099_00150 PF09360 Iron-binding zinc finger CDGSH type C0099_00155 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily C0099_00160 PF00248 Aldo/keto reductase family C0099_00175 PF07728 AAA domain (dynein-related subfamily) C0099_00175 PF08406 C0099_00175 C0099_00180 PF00092 von Willebrand factor type A domain C0099_00190 PF09933 C0099_00190 C0099_00195 PF00208 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase C0099_00195 PF02812 Glu/Leu/Phe/Val dehydrogenase, dimerisation domain C0099_00205 PF02321 Outer membrane efflux protein C0099_00210 PF00873 AcrB/AcrD/AcrF family C0099_00215 PF16576 C0099_00215 C0099_00220 PF00440 Bacterial regulatory proteins, tetR family C0099_00220 PF13977 Bacterial transcriptional repressor C0099_00225 PF04338 Protein of unknown function, DUF481 C0099_00230 PF00004 ATPase family associated with various cellular activities (AAA) C0099_00235 PF13245 Part of AAA domain C0099_00235 PF13538 UvrD-like helicase C-terminal domain C0099_00240 PF00011 Hsp20/alpha crystallin family C0099_00245 PF00011 Hsp20/alpha crystallin family C0099_00250 PF00571 CBS domain C0099_00255 PF07670 Nucleoside recognition C0099_00260 PF13531 Bacterial extracellular solute-binding protein C0099_00265 PF00528 Binding-protein-dependent transport system inner membrane component C0099_00270 PF00005 ABC transporter C0099_00270 PF03459 TOBE domain C0099_00275 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family C0099_00275 PF12727 PBP superfamily domain C0099_00280 PF12849 PBP superfamily domain C0099_00285 PF00582 Universal stress protein family C0099_00290 PF00916 C0099_00290 C0099_00290 PF01740 STAS domain C0099_00300 PF13649 Methyltransferase domain C0099_00305 PF01661 Macro domain C0099_00310 PF04095 Nicotinate phosphoribosyltransferase (NAPRTase) family C0099_00315 PF00857 Isochorismatase family C0099_00330 PF01774 UreD urease accessory protein C0099_00335 PF00547 Urease, gamma subunit C0099_00340 PF00699 Urease beta subunit C0099_00345 PF00449 Urease alpha-subunit, N-terminal domain C0099_00345 PF01979 Amidohydrolase family C0099_00350 PF02814 UreE urease accessory protein, N-terminal domain C0099_00350 PF05194 UreE urease accessory protein, C-terminal domain C0099_00355 PF01730 UreF C0099_00360 PF02492 CobW/HypB/UreG, nucleotide-binding domain C0099_00365 PF04955 C0099_00365 C0099_00370 PF00805 Pentapeptide repeats (8 copies) C0099_00375 PF12840 Helix-turn-helix domain C0099_00380 PF01451 Low molecular weight phosphotyrosine protein phosphatase C0099_00385 PF01758 Sodium Bile acid symporter family C0099_00390 PF00753 Metallo-beta-lactamase superfamily C0099_00395 PF00563 EAL domain C0099_00395 PF00989 PAS fold C0099_00395 PF00990 GGDEF domain C0099_00395 PF08447 PAS fold C0099_00395 PF08448 PAS fold C0099_00395 PF13185 GAF domain C0099_00400 PF13619 C0099_00400 C0099_00405 PF01381 Helix-turn-helix C0099_00410 PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain C0099_00415 PF03435 Saccharopine dehydrogenase C0099_00415 PF16653 C0099_00415 C0099_00425 PF11071 C0099_00425 C0099_00430 PF07238 PilZ domain C0099_00430 PF12945 Flagellar protein YcgR C0099_00435 PF13396 C0099_00435 C0099_00445 PF07556 C0099_00445 C0099_00455 PF00571 CBS domain C0099_00460 PF00005 ABC transporter C0099_00465 PF03379 C0099_00465 C0099_00470 PF01578 C0099_00470 C0099_00475 PF04995 C0099_00475 C0099_00480 PF03100 CcmE C0099_00485 PF01578 C0099_00485 C0099_00485 PF16327 C0099_00485 C0099_00490 PF08534 Redoxin C0099_00495 PF03918 Cytochrome C biogenesis protein C0099_00510 PF00842 Alanine racemase, C-terminal domain C0099_00510 PF01168 Alanine racemase, N-terminal domain C0099_00515 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain C0099_00520 PF00561 alpha/beta hydrolase fold C0099_00520 PF08386 TAP-like protein C0099_00525 PF00216 Bacterial DNA-binding protein C0099_00530 PF01029 NusB family C0099_00535 PF00885 6,7-dimethyl-8-ribityllumazine synthase C0099_00540 PF00925 GTP cyclohydrolase II C0099_00540 PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase C0099_00545 PF00677 Lumazine binding domain C0099_00550 PF02683 C0099_00550 C0099_00550 PF11412 Disulphide bond corrector protein DsbC C0099_00550 PF13899 Thioredoxin-like C0099_00555 PF03091 CutA1 divalent ion tolerance protein C0099_00560 PF10975 C0099_00560 C0099_00565 PF05036 Sporulation related domain C0099_00570 PF02623 FliW protein C0099_00580 PF01042 Endoribonuclease L-PSP C0099_00585 PF00270 DEAD/DEAH box helicase C0099_00585 PF00271 Helicase conserved C-terminal domain C0099_00585 PF17191 C0099_00585 C0099_00590 PF13437 HlyD family secretion protein C0099_00590 PF13533 Biotin-lipoyl like C0099_00595 PF00873 AcrB/AcrD/AcrF family C0099_00600 PF04345 Chorismate lyase C0099_00605 PF01040 UbiA prenyltransferase family C0099_00615 PF00215 Orotidine 5'-phosphate decarboxylase / HUMPS family C0099_00620 PF01977 3-octaprenyl-4-hydroxybenzoate carboxy-lyase C0099_00630 PF03992 Antibiotic biosynthesis monooxygenase C0099_00635 PF02113 D-Ala-D-Ala carboxypeptidase 3 (S13) family C0099_00640 PF16363 C0099_00640 C0099_00645 PF00483 Nucleotidyl transferase C0099_00650 PF00908 dTDP-4-dehydrorhamnose 3,5-epimerase C0099_00655 PF04321 RmlD substrate binding domain C0099_00660 PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain C0099_00660 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain C0099_00665 PF13627 C0099_00665 C0099_00670 PF01491 Frataxin-like domain C0099_00675 PF00905 Penicillin binding protein transpeptidase domain C0099_00675 PF00912 Transglycosylase C0099_00675 PF17092 C0099_00675 C0099_00680 PF11104 Type IV pilus assembly protein PilM; C0099_00685 PF05137 C0099_00685 C0099_00690 PF04350 Pilus assembly protein, PilO C0099_00695 PF04351 Pilus assembly protein, PilP C0099_00700 PF00263 C0099_00700 C0099_00700 PF03958 Bacterial type II/III secretion system short domain C0099_00700 PF07660 Secretin and TonB N terminus short domain C0099_00700 PF11741 AMIN domain C0099_00705 PF01202 Shikimate kinase C0099_00710 PF01761 3-dehydroquinate synthase C0099_00715 PF01966 HD domain C0099_00715 PF13286 Phosphohydrolase-associated domain C0099_00720 PF00310 Glutamine amidotransferases class-II C0099_00720 PF01493 GXGXG motif C0099_00720 PF01645 Conserved region in glutamate synthase C0099_00720 PF04898 Glutamate synthase central domain C0099_00725 PF07992 Pyridine nucleotide-disulphide oxidoreductase C0099_00725 PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster C0099_00730 PF01593 Flavin containing amine oxidoreductase C0099_00730 PF13450 NAD(P)-binding Rossmann-like domain C0099_00735 PF11911 C0099_00735 C0099_00740 PF13458 Periplasmic binding protein C0099_00745 PF02653 C0099_00745 C0099_00750 PF00005 ABC transporter C0099_00750 PF02653 C0099_00750 C0099_00750 PF12399 Branched-chain amino acid ATP-binding cassette transporter C0099_00755 PF00005 ABC transporter C0099_00760 PF13561 Enoyl-(Acyl carrier protein) reductase C0099_00765 PF12680 SnoaL-like domain C0099_00775 PF04134 C0099_00775 C0099_00780 PF03724 META domain C0099_00780 PF04170 NlpE N-terminal domain C0099_00780 PF17185 C0099_00780 C0099_00790 PF03473 MOSC domain C0099_00795 PF01554 MatE C0099_00800 PF09982 Uncharacterized protein conserved in bacteria (DUF2219) C0099_00810 PF00155 Aminotransferase class I and II C0099_00810 PF00392 Bacterial regulatory proteins, gntR family C0099_00815 PF02082 Transcriptional regulator C0099_00820 PF07732 Multicopper oxidase C0099_00825 PF00034 Cytochrome c C0099_00830 PF13442 Cytochrome C oxidase, cbb3-type, subunit III C0099_00835 PF07731 Multicopper oxidase C0099_00835 PF07732 Multicopper oxidase C0099_00840 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain C0099_00840 PF13682 Chemoreceptor zinc-binding domain C0099_00845 PF14339 C0099_00845 C0099_00855 PF00860 Permease family C0099_00860 PF14681 Uracil phosphoribosyltransferase C0099_00865 PF02604 Antitoxin Phd_YefM, type II toxin-antitoxin system C0099_00870 PF06769 Plasmid encoded toxin Txe C0099_00875 PF01381 Helix-turn-helix C0099_00880 PF05015 Plasmid maintenance system killer protein C0099_00885 PF01850 PIN domain C0099_00890 PF03869 Arc-like DNA binding domain C0099_00895 PF01850 PIN domain C0099_00905 PF02810 SEC-C motif C0099_00905 PF07929 Plasmid pRiA4b ORF-3-like protein C0099_00910 PF04257 Exodeoxyribonuclease V, gamma subunit C0099_00915 PF00580 UvrD/REP helicase N-terminal domain C0099_00915 PF12705 PD-(D/E)XK nuclease superfamily C0099_00915 PF13361 UvrD-like helicase C-terminal domain C0099_00920 PF13538 UvrD-like helicase C-terminal domain C0099_00920 PF13604 AAA domain C0099_00925 PF02441 Flavoprotein C0099_00930 PF02190 ATP-dependent protease La (LON) domain C0099_00935 PF00730 HhH-GPD superfamily base excision DNA repair protein C0099_00935 PF14815 NUDIX domain C0099_00940 PF01613 Flavin reductase like domain C0099_00945 PF07690 Major Facilitator Superfamily C0099_00950 PF13847 Methyltransferase domain C0099_00960 PF02597 ThiS family C0099_00965 PF05690 Thiazole biosynthesis protein ThiG C0099_00970 PF02390 Putative methyltransferase C0099_00975 PF01343 Peptidase family S49 C0099_00980 PF01548 C0099_00980 C0099_00980 PF02371 C0099_00980 C0099_00985 PF04055 Radical SAM superfamily C0099_00985 PF06969 HemN C-terminal domain C0099_00990 PF01725 Ham1 family C0099_00995 PF01138 3' exoribonuclease family, domain 1 C0099_00995 PF03725 3' exoribonuclease family, domain 2 C0099_01000 PF13672 Protein phosphatase 2C C0099_01005 PF00069 Protein kinase domain C0099_01010 PF03755 C0099_01010 C0099_01010 PF08340 C0099_01010 C0099_01015 PF00625 Guanylate kinase C0099_01020 PF01192 RNA polymerase Rpb6 C0099_01025 PF02824 TGS domain C0099_01025 PF04607 Region found in RelA / SpoT proteins C0099_01025 PF13291 ACT domain C0099_01025 PF13328 HD domain C0099_01030 PF00317 Ribonucleotide reductase, all-alpha domain C0099_01030 PF02867 Ribonucleotide reductase, barrel domain C0099_01030 PF03477 ATP cone domain C0099_01035 PF00268 Ribonucleotide reductase, small chain C0099_01040 PF14375 C0099_01040 C0099_01045 PF02639 C0099_01045 C0099_01055 PF00753 Metallo-beta-lactamase superfamily C0099_01060 PF01475 Ferric uptake regulator family C0099_01065 PF01258 Prokaryotic dksA/traR C4-type zinc finger C0099_01070 PF02492 CobW/HypB/UreG, nucleotide-binding domain C0099_01070 PF07683 Cobalamin synthesis protein cobW C-terminal domain C0099_01075 PF00929 Exonuclease C0099_01085 PF00474 Sodium:solute symporter family C0099_01090 PF13561 Enoyl-(Acyl carrier protein) reductase C0099_01095 PF00296 Luciferase-like monooxygenase C0099_01100 PF10727 Rossmann-like domain C0099_01100 PF10728 Domain of unknown function (DUF2520) C0099_01105 PF11141 C0099_01105 C0099_01110 PF00072 Response regulator receiver domain C0099_01110 PF00512 His Kinase A (phospho-acceptor) domain C0099_01110 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase C0099_01115 PF00072 Response regulator receiver domain C0099_01115 PF00196 Bacterial regulatory proteins, luxR family C0099_01120 PF01427 D-ala-D-ala dipeptidase C0099_01125 PF11697 C0099_01125 C0099_01130 PF16363 C0099_01130 C0099_01135 PF00005 ABC transporter C0099_01135 PF00664 ABC transporter transmembrane region C0099_01140 PF01850 PIN domain C0099_01145 PF04014 Antidote-toxin recognition MazE C0099_01150 PF13433 Periplasmic binding protein domain C0099_01155 PF02653 C0099_01155 C0099_01160 PF02653 C0099_01160 C0099_01165 PF00005 ABC transporter C0099_01165 PF12399 Branched-chain amino acid ATP-binding cassette transporter C0099_01170 PF00005 ABC transporter C0099_01175 PF01381 Helix-turn-helix C0099_01180 PF06296 C0099_01180 C0099_01190 PF11455 C0099_01190 C0099_01195 PF01068 ATP dependent DNA ligase domain C0099_01195 PF14743 DNA ligase OB-like domain C0099_01205 PF02798 Glutathione S-transferase, N-terminal domain C0099_01205 PF13410 Glutathione S-transferase, C-terminal domain C0099_01210 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain C0099_01210 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain C0099_01215 PF00871 Acetokinase family C0099_01220 PF01515 Phosphate acetyl/butaryl transferase C0099_01220 PF01575 MaoC like domain C0099_01225 PF00132 Bacterial transferase hexapeptide (six repeats) C0099_01225 PF12804 MobA-like NTP transferase domain C0099_01230 PF01380 SIS domain C0099_01230 PF13522 Glutamine amidotransferase domain C0099_01245 PF01381 Helix-turn-helix C0099_01250 PF05015 Plasmid maintenance system killer protein C0099_01255 PF00665 Integrase core domain C0099_01260 PF01695 IstB-like ATP binding protein C0099_01270 PF03069 Acetamidase/Formamidase family C0099_01275 PF03069 Acetamidase/Formamidase family C0099_01275 PF12833 Helix-turn-helix domain C0099_01275 PF14525 C0099_01275 C0099_01280 PF09723 C0099_01280 C0099_01285 PF03069 Acetamidase/Formamidase family C0099_01290 PF00072 Response regulator receiver domain C0099_01290 PF00563 EAL domain C0099_01295 PF00512 His Kinase A (phospho-acceptor) domain C0099_01295 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase C0099_01300 PF00196 Bacterial regulatory proteins, luxR family C0099_01305 PF02293 AmiS/UreI family transporter C0099_01310 PF12831 FAD dependent oxidoreductase C0099_01315 PF00392 Bacterial regulatory proteins, gntR family C0099_01315 PF07729 FCD domain C0099_01320 PF03480 Bacterial extracellular solute-binding protein, family 7 C0099_01325 PF04290 C0099_01325 C0099_01330 PF06808 C0099_01330 C0099_01335 PF00392 Bacterial regulatory proteins, gntR family C0099_01335 PF07729 FCD domain C0099_01340 PF03401 Tripartite tricarboxylate transporter family receptor C0099_01345 PF07331 C0099_01345 C0099_01350 PF01970 C0099_01350 C0099_01355 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain C0099_01355 PF13378 Enolase C-terminal domain-like C0099_01360 PF01557 Fumarylacetoacetate (FAA) hydrolase family C0099_01365 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain C0099_01365 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain C0099_01370 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain C0099_01370 PF13378 Enolase C-terminal domain-like C0099_01375 PF00392 Bacterial regulatory proteins, gntR family C0099_01375 PF07702 UTRA domain C0099_01380 PF07331 C0099_01380 C0099_01385 PF01970 C0099_01385 C0099_01390 PF03401 Tripartite tricarboxylate transporter family receptor C0099_01395 PF00884 Sulfatase C0099_01400 PF01925 C0099_01400 C0099_01405 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family C0099_01405 PF03466 LysR substrate binding domain C0099_01410 PF01717 Cobalamin-independent synthase, Catalytic domain C0099_01410 PF08267 Cobalamin-independent synthase, N-terminal domain C0099_01415 PF12802 MarR family C0099_01420 PF16694 C0099_01420 C0099_01425 PF00924 Mechanosensitive ion channel C0099_01435 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family C0099_01435 PF03466 LysR substrate binding domain C0099_01440 PF07992 Pyridine nucleotide-disulphide oxidoreductase C0099_01445 PF02082 Transcriptional regulator C0099_01450 PF00042 Globin C0099_01450 PF00175 Oxidoreductase NAD-binding domain C0099_01450 PF00970 Oxidoreductase FAD-binding domain C0099_01455 PF00571 CBS domain C0099_01455 PF04982 C0099_01455 C0099_01465 PF14229 C0099_01465 C0099_01470 PF00881 Nitroreductase family C0099_01480 PF00535 Glycosyl transferase family 2 C0099_01480 PF03452 Anp1 C0099_01480 PF04488 Glycosyltransferase sugar-binding region containing DXD motif C0099_01485 PF14907 Uncharacterised nucleotidyltransferase C0099_01490 PF05402 Coenzyme PQQ synthesis protein D (PqqD) C0099_01500 PF02709 N-terminal domain of galactosyltransferase C0099_01515 PF01451 Low molecular weight phosphotyrosine protein phosphatase C0099_01520 PF03358 NADPH-dependent FMN reductase C0099_01525 PF00593 TonB dependent receptor C0099_01525 PF07715 TonB-dependent Receptor Plug Domain C0099_01530 PF00512 His Kinase A (phospho-acceptor) domain C0099_01530 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase C0099_01530 PF07695 C0099_01530 C0099_01530 PF07696 7TMR-DISM extracellular 2 C0099_01535 PF00072 Response regulator receiver domain C0099_01535 PF00486 Transcriptional regulatory protein, C terminal C0099_01540 PF01345 C0099_01540 C0099_01540 PF17210 C0099_01540 C0099_01545 PF04773 FecR protein C0099_01550 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase C0099_01550 PF05226 C0099_01550 C0099_01555 PF12840 Helix-turn-helix domain C0099_01560 PF08327 Activator of Hsp90 ATPase homolog 1-like protein C0099_01565 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family C0099_01565 PF03466 LysR substrate binding domain C0099_01570 PF02678 Pirin C0099_01570 PF05726 Pirin C-terminal cupin domain C0099_01575 PF00857 Isochorismatase family C0099_01580 PF02678 Pirin C0099_01580 PF05726 Pirin C-terminal cupin domain C0099_01585 PF03022 Major royal jelly protein C0099_01590 PF08240 Alcohol dehydrogenase GroES-like domain C0099_01590 PF13602 Zinc-binding dehydrogenase C0099_01595 PF00563 EAL domain C0099_01595 PF00990 GGDEF domain C0099_01595 PF13426 PAS domain C0099_01605 PF13502 C0099_01605 C0099_01610 PF00472 RF-1 domain C0099_01615 PF00392 Bacterial regulatory proteins, gntR family C0099_01615 PF07729 FCD domain C0099_01620 PF01522 Polysaccharide deacetylase C0099_01625 PF03561 Allantoicase repeat C0099_01630 PF04115 Ureidoglycolate hydrolase C0099_01635 PF00392 Bacterial regulatory proteins, gntR family C0099_01635 PF07729 FCD domain C0099_01640 PF01425 Amidase C0099_01645 PF01979 Amidohydrolase family C0099_01650 PF01522 Polysaccharide deacetylase C0099_01655 PF03480 Bacterial extracellular solute-binding protein, family 7 C0099_01660 PF04290 C0099_01660 C0099_01665 PF06808 C0099_01665 C0099_01675 PF12146 Putative lysophospholipase C0099_01685 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family C0099_01685 PF03466 LysR substrate binding domain C0099_01690 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family C0099_01690 PF03466 LysR substrate binding domain C0099_01695 PF01810 C0099_01695 C0099_01700 PF00378 Enoyl-CoA hydratase/isomerase family C0099_01705 PF06779 C0099_01705 C0099_01710 PF02627 Carboxymuconolactone decarboxylase family C0099_01715 PF13649 Methyltransferase domain C0099_01720 PF10973 C0099_01720 C0099_01725 PF00534 Glycosyl transferases group 1 C0099_01725 PF13439 Glycosyltransferase Family 4 C0099_01730 PF03706 C0099_01730 C0099_01735 PF00724 NADH:flavin oxidoreductase / NADH oxidase family C0099_01740 PF05099 Tellurite resistance protein TerB C0099_01750 PF00005 ABC transporter C0099_01755 PF00990 GGDEF domain C0099_01755 PF08447 PAS fold C0099_01755 PF13188 PAS domain C0099_01760 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region C0099_01765 PF13505 Outer membrane protein beta-barrel domain C0099_01770 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase C0099_01770 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase C0099_01775 PF00224 Pyruvate kinase, barrel domain C0099_01775 PF02887 Pyruvate kinase, alpha/beta domain C0099_01780 PF00027 Cyclic nucleotide-binding domain C0099_01785 PF00205 Thiamine pyrophosphate enzyme, central domain C0099_01785 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain C0099_01785 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain C0099_01790 PF02515 CoA-transferase family III C0099_01795 PF00989 PAS fold C0099_01800 PF01257 Thioredoxin-like [2Fe-2S] ferredoxin C0099_01800 PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit C0099_01800 PF10531 SLBB domain C0099_01800 PF10589 NADH-ubiquinone oxidoreductase-F iron-sulfur binding region C0099_01805 PF00384 Molybdopterin oxidoreductase C0099_01805 PF01568 Molydopterin dinucleotide binding domain C0099_01805 PF04879 Molybdopterin oxidoreductase Fe4S4 domain C0099_01805 PF13187 4Fe-4S dicluster domain C0099_01805 PF13510 2Fe-2S iron-sulfur cluster binding domain C0099_01815 PF00078 Reverse transcriptase (RNA-dependent DNA polymerase) C0099_01815 PF08388 C0099_01815 C0099_01820 PF00107 Zinc-binding dehydrogenase C0099_01820 PF08240 Alcohol dehydrogenase GroES-like domain C0099_01825 PF02515 CoA-transferase family III C0099_01840 PF01323 DSBA-like thioredoxin domain C0099_01845 PF03401 Tripartite tricarboxylate transporter family receptor C0099_01850 PF07331 C0099_01850 C0099_01855 PF01970 C0099_01855 C0099_01860 PF04972 BON domain C0099_01860 PF13189 Cytidylate kinase-like family C0099_01865 PF06508 Queuosine biosynthesis protein QueC C0099_01870 PF04055 Radical SAM superfamily C0099_01870 PF13394 4Fe-4S single cluster domain C0099_01875 PF13174 Tetratricopeptide repeat C0099_01875 PF13432 Tetratricopeptide repeat C0099_01875 PF16331 C0099_01875 C0099_01880 PF00691 OmpA family C0099_01885 PF04052 TolB amino-terminal domain C0099_01885 PF07676 WD40-like Beta Propeller Repeat C0099_01890 PF13103 TonB C terminal C0099_01895 PF02472 Biopolymer transport protein ExbD/TolR C0099_01900 PF01618 C0099_01900 C0099_01905 PF03061 Thioesterase superfamily C0099_01910 PF13466 STAS domain C0099_01915 PF00227 Proteasome subunit C0099_01920 PF00004 ATPase family associated with various cellular activities (AAA) C0099_01920 PF07724 AAA domain (Cdc48 subfamily) C0099_01925 PF09411 Lipid A 3-O-deacylase (PagL) C0099_01930 PF03547 C0099_01930 C0099_01935 PF09413 Domain of unknown function (DUF2007) C0099_01940 PF01145 SPFH domain / Band 7 family C0099_01945 PF01957 NfeD-like C-terminal, partner-binding C0099_01950 PF05170 C0099_01950 C0099_01955 PF03060 Nitronate monooxygenase C0099_01960 PF00009 Elongation factor Tu GTP binding domain C0099_01965 PF01548 C0099_01965 C0099_01965 PF02371 C0099_01965 C0099_01970 PF01507 Phosphoadenosine phosphosulfate reductase family C0099_01975 PF01507 Phosphoadenosine phosphosulfate reductase family C0099_01980 PF06073 C0099_01980 C0099_01985 PF01077 Nitrite and sulphite reductase 4Fe-4S domain C0099_01985 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain C0099_01990 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family C0099_01990 PF03466 LysR substrate binding domain C0099_01995 PF00710 Asparaginase C0099_02000 PF00005 ABC transporter C0099_02000 PF00664 ABC transporter transmembrane region C0099_02005 PF00441 Acyl-CoA dehydrogenase, C-terminal domain C0099_02005 PF02771 Acyl-CoA dehydrogenase, N-terminal domain C0099_02005 PF09317 C0099_02005 C0099_02010 PF00108 Thiolase, N-terminal domain C0099_02010 PF02803 Thiolase, C-terminal domain C0099_02015 PF00378 Enoyl-CoA hydratase/isomerase family C0099_02015 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain C0099_02015 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain C0099_02020 PF03061 Thioesterase superfamily C0099_02025 PF00378 Enoyl-CoA hydratase/isomerase family C0099_02025 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain C0099_02025 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain C0099_02030 PF01548 C0099_02030 C0099_02030 PF02371 C0099_02030 C0099_02035 PF13410 Glutathione S-transferase, C-terminal domain C0099_02035 PF13417 Glutathione S-transferase, N-terminal domain C0099_02040 PF00561 alpha/beta hydrolase fold C0099_02050 PF04892 C0099_02050 C0099_02055 PF00474 Sodium:solute symporter family C0099_02060 PF01850 PIN domain C0099_02065 PF02604 Antitoxin Phd_YefM, type II toxin-antitoxin system C0099_02070 PF03109 C0099_02070 C0099_02075 PF01757 C0099_02075 C0099_02080 PF00750 tRNA synthetases class I (R) C0099_02080 PF03485 Arginyl tRNA synthetase N terminal domain C0099_02080 PF05746 DALR anticodon binding domain C0099_02085 PF05036 Sporulation related domain C0099_02090 PF01323 DSBA-like thioredoxin domain C0099_02100 PF05088 C0099_02100 C0099_02105 PF06808 C0099_02105 C0099_02105 PF11874 C0099_02105 C0099_02110 PF16868 C0099_02110 C0099_02115 PF01262 Alanine dehydrogenase/PNT, C-terminal domain C0099_02115 PF05222 Alanine dehydrogenase/PNT, N-terminal domain C0099_02120 PF13470 C0099_02120 C0099_02125 PF00561 alpha/beta hydrolase fold C0099_02125 PF07167 C0099_02125 C0099_02130 PF00753 Metallo-beta-lactamase superfamily C0099_02135 PF01323 DSBA-like thioredoxin domain C0099_02140 PF00682 HMGL-like C0099_02145 PF06945 C0099_02145 C0099_02150 PF06945 C0099_02150 C0099_02155 PF03668 C0099_02155 C0099_02160 PF07009 Protein of unknown function (DUF1312) C0099_02165 PF08681 Protein of unknown function (DUF1778) C0099_02175 PF00208 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase C0099_02175 PF02812 Glu/Leu/Phe/Val dehydrogenase, dimerisation domain C0099_02185 PF04116 C0099_02185 C0099_02190 PF13432 Tetratricopeptide repeat C0099_02195 PF00672 HAMP domain C0099_02195 PF00990 GGDEF domain C0099_02195 PF09984 C0099_02195 C0099_02200 PF04392 ABC transporter substrate binding protein C0099_02205 PF00593 TonB dependent receptor C0099_02205 PF07715 TonB-dependent Receptor Plug Domain C0099_02210 PF07456 C0099_02210 C0099_02215 PF00300 Histidine phosphatase superfamily (branch 1) C0099_02220 PF01738 Dienelactone hydrolase family C0099_02225 PF02690 C0099_02225 C0099_02230 PF02075 Crossover junction endodeoxyribonuclease RuvC C0099_02235 PF00892 EamA-like transporter family C0099_02240 PF01709 Transcriptional regulator C0099_02250 PF05872 C0099_02250 C0099_02260 PF02219 Methylenetetrahydrofolate reductase C0099_02265 PF01479 S4 domain C0099_02265 PF01728 FtsJ-like methyltransferase C0099_02270 PF00795 Carbon-nitrogen hydrolase C0099_02275 PF00583 Acetyltransferase (GNAT) family C0099_02280 PF00670 S-adenosyl-L-homocysteine hydrolase, NAD binding domain C0099_02280 PF05221 S-adenosyl-L-homocysteine hydrolase C0099_02285 PF01699 Sodium/calcium exchanger protein C0099_02290 PF00438 S-adenosylmethionine synthetase, N-terminal domain C0099_02290 PF02772 S-adenosylmethionine synthetase, central domain C0099_02290 PF02773 S-adenosylmethionine synthetase, C-terminal domain C0099_02295 PF03279 C0099_02295 C0099_02300 PF03279 C0099_02300 C0099_02305 PF00596 Class II Aldolase and Adducin N-terminal domain C0099_02310 PF01008 Initiation factor 2 subunit family C0099_02315 PF08972 Domain of unknown function (DUF1902) C0099_02330 PF00512 His Kinase A (phospho-acceptor) domain C0099_02330 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase C0099_02330 PF13188 PAS domain C0099_02335 PF00072 Response regulator receiver domain C0099_02335 PF00158 Sigma-54 interaction domain C0099_02335 PF02954 Bacterial regulatory protein, Fis family C0099_02340 PF13560 Helix-turn-helix domain C0099_02345 PF07804 HipA-like C-terminal domain C0099_02345 PF13657 HipA N-terminal domain C0099_02350 PF00665 Integrase core domain C0099_02350 PF13936 Helix-turn-helix domain C0099_02355 PF02954 Bacterial regulatory protein, Fis family C0099_02360 PF02604 Antitoxin Phd_YefM, type II toxin-antitoxin system C0099_02365 PF01850 PIN domain C0099_02370 PF01909 Nucleotidyltransferase domain C0099_02375 PF01934 Protein of unknown function DUF86 C0099_02380 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain C0099_02380 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain C0099_02380 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain C0099_02385 PF00114 Pilin (bacterial filament) C0099_02385 PF07963 Prokaryotic N-terminal methylation motif C0099_02395 PF00535 Glycosyl transferase family 2 C0099_02400 PF02350 UDP-N-acetylglucosamine 2-epimerase C0099_02405 PF04464 CDP-Glycerol:Poly(glycerophosphate) glycerophosphotransferase C0099_02410 PF01467 Cytidylyltransferase C0099_02415 PF07922 Glycosyltransferase family 52 C0099_02420 PF03102 NeuB family C0099_02420 PF08666 SAF domain C0099_02425 PF08889 C0099_02425 C0099_02435 PF13847 Methyltransferase domain C0099_02440 PF13450 NAD(P)-binding Rossmann-like domain C0099_02445 PF02348 Cytidylyltransferase C0099_02450 PF01909 Nucleotidyltransferase domain C0099_02455 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family C0099_02460 PF02719 Polysaccharide biosynthesis protein C0099_02465 PF00005 ABC transporter C0099_02465 PF00664 ABC transporter transmembrane region C0099_02470 PF08780 Nucleotidyltransferase substrate binding protein like C0099_02475 PF01909 Nucleotidyltransferase domain C0099_02480 PF01909 Nucleotidyltransferase domain C0099_02485 PF08780 Nucleotidyltransferase substrate binding protein like C0099_02490 PF01510 N-acetylmuramoyl-L-alanine amidase C0099_02495 PF01464 Transglycosylase SLT domain C0099_02500 PF00583 Acetyltransferase (GNAT) family C0099_02505 PF08681 Protein of unknown function (DUF1778) C0099_02510 PF00155 Aminotransferase class I and II C0099_02515 PF00390 Malic enzyme, N-terminal domain C0099_02515 PF01515 Phosphate acetyl/butaryl transferase C0099_02515 PF03949 Malic enzyme, NAD binding domain C0099_02520 PF00768 D-alanyl-D-alanine carboxypeptidase C0099_02525 PF01678 Diaminopimelate epimerase C0099_02530 PF04340 Protein of unknown function, DUF484 C0099_02535 PF00589 Phage integrase family C0099_02535 PF02899 Phage integrase, N-terminal SAM-like domain C0099_02540 PF10006 C0099_02540 C0099_02545 PF01297 Periplasmic solute binding protein family C0099_02550 PF00950 C0099_02550 C0099_02555 PF00005 ABC transporter C0099_02560 PF10986 C0099_02560 C0099_02565 PF00005 ABC transporter C0099_02570 PF02687 C0099_02570 C0099_02570 PF12704 MacB-like periplasmic core domain C0099_02575 PF11736 Protein of unknown function (DUF3299) C0099_02580 PF07238 PilZ domain C0099_02585 PF00563 EAL domain C0099_02585 PF00990 GGDEF domain C0099_02585 PF16448 C0099_02585 C0099_02590 PF14489 QueF-like protein C0099_02590 PF14819 Nitrile reductase, 7-cyano-7-deazaguanine-reductase N-term C0099_02595 PF03190 Protein of unknown function, DUF255 C0099_02600 PF00034 Cytochrome c C0099_02605 PF00072 Response regulator receiver domain C0099_02605 PF00563 EAL domain C0099_02605 PF00989 PAS fold C0099_02605 PF00990 GGDEF domain C0099_02610 PF00512 His Kinase A (phospho-acceptor) domain C0099_02610 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase C0099_02615 PF08668 HDOD domain C0099_02620 PF00111 2Fe-2S iron-sulfur cluster binding domain C0099_02620 PF00175 Oxidoreductase NAD-binding domain C0099_02620 PF00970 Oxidoreductase FAD-binding domain C0099_02625 PF01370 NAD dependent epimerase/dehydratase family C0099_02630 PF03653 C0099_02630 C0099_02635 PF01170 Putative RNA methylase family UPF0020 C0099_02635 PF02926 THUMP domain C0099_02640 PF00437 Type II/IV secretion system protein C0099_02645 PF00437 Type II/IV secretion system protein C0099_02650 PF01168 Alanine racemase, N-terminal domain C0099_02655 PF03807 NADP oxidoreductase coenzyme F420-dependent C0099_02655 PF14748 Pyrroline-5-carboxylate reductase dimerisation C0099_02660 PF02325 C0099_02660 C0099_02665 PF01548 C0099_02665 C0099_02665 PF02371 C0099_02665 C0099_02670 PF07969 Amidohydrolase family C0099_02675 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain C0099_02675 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain C0099_02680 PF00156 Phosphoribosyl transferase domain C0099_02685 PF03652 Uncharacterised protein family (UPF0081) C0099_02690 PF02622 Uncharacterized ACR, COG1678 C0099_02695 PF00875 DNA photolyase C0099_02695 PF03441 FAD binding domain of DNA photolyase C0099_02700 PF00072 Response regulator receiver domain C0099_02700 PF01584 CheW-like domain C0099_02700 PF01627 Hpt domain C0099_02700 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase C0099_02705 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain C0099_02705 PF13675 Type IV pili methyl-accepting chemotaxis transducer N-term C0099_02710 PF01584 CheW-like domain C0099_02715 PF00072 Response regulator receiver domain C0099_02720 PF00072 Response regulator receiver domain C0099_02725 PF00301 Rubredoxin C0099_02730 PF02581 Thiamine monophosphate synthase/TENI C0099_02735 PF00202 Aminotransferase class-III C0099_02740 PF04343 C0099_02740 C0099_02745 PF00571 CBS domain C0099_02745 PF01769 Divalent cation transporter C0099_02745 PF03448 MgtE intracellular N domain C0099_02750 PF00912 Transglycosylase C0099_02755 PF01488 Shikimate / quinate 5-dehydrogenase C0099_02755 PF08501 Shikimate dehydrogenase substrate binding domain C0099_02760 PF03544 Gram-negative bacterial TonB protein C-terminal C0099_02765 PF00773 RNB domain C0099_02770 PF02635 DsrE/DsrF-like family C0099_02775 PF06295 C0099_02775 C0099_02780 PF05728 Uncharacterised protein family (UPF0227) C0099_02785 PF10649 C0099_02785 C0099_02790 PF02080 TrkA-C domain C0099_02790 PF03600 Citrate transporter C0099_02795 PF00563 EAL domain C0099_02795 PF00990 GGDEF domain C0099_02795 PF07694 5TMR of 5TMR-LYT C0099_02795 PF08448 PAS fold C0099_02800 PF01964 ThiC family C0099_02800 PF13667 ThiC-associated domain C0099_02805 PF08543 Phosphomethylpyrimidine kinase C0099_02810 PF01169 C0099_02810 C0099_02815 PF00194 Eukaryotic-type carbonic anhydrase C0099_02820 PF07690 Major Facilitator Superfamily C0099_02840 PF01642 Methylmalonyl-CoA mutase C0099_02840 PF02310 B12 binding domain C0099_02845 PF03308 ArgK protein C0099_02850 PF01039 Carboxyl transferase domain C0099_02855 PF00289 Carbamoyl-phosphate synthase L chain, N-terminal domain C0099_02855 PF00364 Biotin-requiring enzyme C0099_02855 PF02785 Biotin carboxylase C-terminal domain C0099_02855 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain C0099_02865 PF13669 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily C0099_02870 PF03547 C0099_02870 C0099_02880 PF00072 Response regulator receiver domain C0099_02880 PF00512 His Kinase A (phospho-acceptor) domain C0099_02880 PF00672 HAMP domain C0099_02880 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase C0099_02880 PF09984 C0099_02880 C0099_02885 PF00072 Response regulator receiver domain C0099_02885 PF00196 Bacterial regulatory proteins, luxR family C0099_02895 PF08241 Methyltransferase domain C0099_02915 PF00009 Elongation factor Tu GTP binding domain C0099_02915 PF03143 Elongation factor Tu C-terminal domain C0099_02915 PF03144 Elongation factor Tu domain 2 C0099_02925 PF00584 SecE/Sec61-gamma subunits of protein translocation complex C0099_02930 PF02357 Transcription termination factor nusG C0099_02935 PF00298 Ribosomal protein L11, RNA binding domain C0099_02935 PF03946 Ribosomal protein L11, N-terminal domain C0099_02940 PF00687 Ribosomal protein L1p/L10e family C0099_02945 PF00466 Ribosomal protein L10 C0099_02950 PF00542 Ribosomal protein L7/L12 C-terminal domain C0099_02950 PF16320 C0099_02950 C0099_02955 PF00562 RNA polymerase Rpb2, domain 6 C0099_02955 PF04560 RNA polymerase Rpb2, domain 7 C0099_02955 PF04561 RNA polymerase Rpb2, domain 2 C0099_02955 PF04563 RNA polymerase beta subunit C0099_02955 PF04565 RNA polymerase Rpb2, domain 3 C0099_02955 PF10385 RNA polymerase beta subunit external 1 domain C0099_02960 PF00623 RNA polymerase Rpb1, domain 2 C0099_02960 PF04983 RNA polymerase Rpb1, domain 3 C0099_02960 PF04997 RNA polymerase Rpb1, domain 1 C0099_02960 PF04998 RNA polymerase Rpb1, domain 5 C0099_02960 PF05000 RNA polymerase Rpb1, domain 4 C0099_02965 PF00164 Ribosomal protein S12/S23 C0099_02970 PF00177 Ribosomal protein S7p/S5e C0099_02975 PF00009 Elongation factor Tu GTP binding domain C0099_02975 PF00679 Elongation factor G C-terminus C0099_02975 PF03144 Elongation factor Tu domain 2 C0099_02975 PF03764 Elongation factor G, domain IV C0099_02975 PF14492 Elongation Factor G, domain II C0099_02980 PF00009 Elongation factor Tu GTP binding domain C0099_02980 PF03143 Elongation factor Tu C-terminal domain C0099_02980 PF03144 Elongation factor Tu domain 2 C0099_02985 PF00338 Ribosomal protein S10p/S20e C0099_02990 PF00297 Ribosomal protein L3 C0099_02995 PF00573 Ribosomal protein L4/L1 family C0099_03000 PF00276 Ribosomal protein L23 C0099_03005 PF00181 Ribosomal Proteins L2, RNA binding domain C0099_03005 PF03947 Ribosomal Proteins L2, C-terminal domain C0099_03010 PF00203 Ribosomal protein S19 C0099_03015 PF00237 Ribosomal protein L22p/L17e C0099_03020 PF00189 Ribosomal protein S3, C-terminal domain C0099_03020 PF07650 KH domain C0099_03025 PF00252 Ribosomal protein L16p/L10e C0099_03030 PF00831 Ribosomal L29 protein C0099_03035 PF00366 Ribosomal protein S17 C0099_03040 PF00238 Ribosomal protein L14p/L23e C0099_03045 PF17136 C0099_03045 C0099_03050 PF00281 Ribosomal protein L5 C0099_03050 PF00673 ribosomal L5P family C-terminus C0099_03055 PF00253 Ribosomal protein S14p/S29e C0099_03060 PF00410 Ribosomal protein S8 C0099_03065 PF00347 Ribosomal protein L6 C0099_03070 PF00861 Ribosomal L18p/L5e family C0099_03075 PF00333 Ribosomal protein S5, N-terminal domain C0099_03075 PF03719 Ribosomal protein S5, C-terminal domain C0099_03080 PF00327 Ribosomal protein L30p/L7e C0099_03085 PF00828 Ribosomal protein L18e/L15 C0099_03090 PF00344 SecY translocase C0099_03095 PF01176 Translation initiation factor 1A / IF-1 C0099_03100 PF00444 Ribosomal protein L36 C0099_03105 PF00416 Ribosomal protein S13/S18 C0099_03110 PF00411 Ribosomal protein S11 C0099_03115 PF00163 Ribosomal protein S4/S9 N-terminal domain C0099_03115 PF01479 S4 domain C0099_03120 PF01000 RNA polymerase Rpb3/RpoA insert domain C0099_03120 PF01193 RNA polymerase Rpb3/Rpb11 dimerisation domain C0099_03120 PF03118 Bacterial RNA polymerase, alpha chain C terminal domain C0099_03125 PF01196 Ribosomal protein L17 C0099_03130 PF01479 S4 domain C0099_03135 PF16363 C0099_03135 C0099_03140 PF09996 Uncharacterized protein conserved in bacteria (DUF2237) C0099_03155 PF07690 Major Facilitator Superfamily C0099_03160 PF00436 Single-strand binding protein family C0099_03165 PF00155 Aminotransferase class I and II C0099_03170 PF00753 Metallo-beta-lactamase superfamily C0099_03175 PF00899 ThiF family C0099_03180 PF01903 CbiX C0099_03190 PF02600 Disulfide bond formation protein DsbB C0099_03195 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family C0099_03195 PF03466 LysR substrate binding domain C0099_03200 PF02525 Flavodoxin-like fold C0099_03205 PF02678 Pirin C0099_03205 PF05726 Pirin C-terminal cupin domain C0099_03210 PF02885 Glycosyl transferase family, helical bundle domain C0099_03215 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase C0099_03215 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase C0099_03220 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase C0099_03220 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase C0099_03225 PF01614 Bacterial transcriptional regulator C0099_03225 PF09339 IclR helix-turn-helix domain C0099_03230 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain C0099_03230 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain C0099_03235 PF00361 NADH-Ubiquinone/plastoquinone (complex I), various chains C0099_03235 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus C0099_03235 PF04039 C0099_03235 C0099_03235 PF13244 C0099_03235 C0099_03240 PF00420 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L C0099_03245 PF00361 NADH-Ubiquinone/plastoquinone (complex I), various chains C0099_03250 PF01899 C0099_03250 C0099_03255 PF04066 C0099_03255 C0099_03260 PF03334 C0099_03260 C0099_03265 PF00849 RNA pseudouridylate synthase C0099_03265 PF01479 S4 domain C0099_03270 PF00361 NADH-Ubiquinone/plastoquinone (complex I), various chains C0099_03270 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus C0099_03270 PF04039 C0099_03270 C0099_03270 PF13244 C0099_03270 C0099_03275 PF00420 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L C0099_03280 PF00361 NADH-Ubiquinone/plastoquinone (complex I), various chains C0099_03285 PF01899 C0099_03285 C0099_03290 PF04066 C0099_03290 C0099_03295 PF03334 C0099_03295 C0099_03300 PF00749 tRNA synthetases class I (E and Q), catalytic domain C0099_03300 PF03950 tRNA synthetases class I (E and Q), anti-codon binding domain C0099_03310 PF00924 Mechanosensitive ion channel C0099_03315 PF02537 C0099_03315 C0099_03320 PF03486 HI0933-like protein C0099_03325 PF03167 Uracil DNA glycosylase superfamily C0099_03330 PF06930 C0099_03330 C0099_03335 PF00271 Helicase conserved C-terminal domain C0099_03335 PF04408 Helicase associated domain (HA2) C0099_03335 PF07717 Oligonucleotide/oligosaccharide-binding (OB)-fold C0099_03335 PF11898 C0099_03335 C0099_03340 PF01250 Ribosomal protein S6 C0099_03350 PF01084 Ribosomal protein S18 C0099_03355 PF01281 Ribosomal protein L9, N-terminal domain C0099_03355 PF03948 Ribosomal protein L9, C-terminal domain C0099_03360 PF00772 DnaB-like helicase N terminal domain C0099_03360 PF03796 DnaB-like helicase C terminal domain C0099_03390 PF04379 Protein of unknown function (DUF525) C0099_03395 PF00206 Lyase C0099_03395 PF08328 Adenylosuccinate lyase C-terminal C0099_03400 PF10084 C0099_03400 C0099_03405 PF02355 Protein export membrane protein C0099_03405 PF07549 SecD/SecF GG Motif C0099_03410 PF02355 Protein export membrane protein C0099_03410 PF07549 SecD/SecF GG Motif C0099_03410 PF13721 SecD export protein N-terminal TM region C0099_03415 PF02699 Preprotein translocase subunit C0099_03420 PF01702 Queuine tRNA-ribosyltransferase C0099_03425 PF02547 Queuosine biosynthesis protein C0099_03435 PF00892 EamA-like transporter family C0099_03440 PF01027 Inhibitor of apoptosis-promoting Bax1 C0099_03445 PF03255 Acetyl co-enzyme A carboxylase carboxyltransferase alpha subunit C0099_03450 PF01171 PP-loop family C0099_03450 PF09179 TilS substrate binding domain C0099_03450 PF11734 TilS substrate C-terminal domain C0099_03455 PF00072 Response regulator receiver domain C0099_03455 PF00196 Bacterial regulatory proteins, luxR family C0099_03460 PF00512 His Kinase A (phospho-acceptor) domain C0099_03460 PF00989 PAS fold C0099_03460 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase C0099_03465 PF03480 Bacterial extracellular solute-binding protein, family 7 C0099_03470 PF00334 Nucleoside diphosphate kinase C0099_03475 PF04055 Radical SAM superfamily C0099_03480 PF13432 Tetratricopeptide repeat C0099_03485 PF13413 Helix-turn-helix domain C0099_03485 PF13464 C0099_03485 C0099_03490 PF04551 GcpE protein C0099_03495 PF03129 Anticodon binding domain C0099_03495 PF13393 Histidyl-tRNA synthetase C0099_03500 PF09976 Tetratricopeptide repeat C0099_03505 PF13360 PQQ-like domain C0099_03510 PF01926 50S ribosome-binding GTPase C0099_03510 PF14714 KH-domain-like of EngA bacterial GTPase enzymes, C-terminal C0099_03515 PF17209 C0099_03515 C0099_03520 PF01926 50S ribosome-binding GTPase C0099_03520 PF13167 C0099_03520 C0099_03520 PF16360 C0099_03520 C0099_03525 PF01145 SPFH domain / Band 7 family C0099_03525 PF12221 C0099_03525 C0099_03530 PF01145 SPFH domain / Band 7 family C0099_03535 PF09838 C0099_03535 C0099_03540 PF13393 Histidyl-tRNA synthetase C0099_03545 PF00709 Adenylosuccinate synthetase C0099_03555 PF00575 S1 RNA binding domain C0099_03555 PF00773 RNB domain C0099_03555 PF08206 Ribonuclease B OB domain C0099_03560 PF00588 SpoU rRNA Methylase family C0099_03560 PF08032 RNA 2'-O ribose methyltransferase substrate binding C0099_03565 PF03861 ANTAR domain C0099_03565 PF08376 Nitrate and nitrite sensing C0099_03575 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases C0099_03580 PF00384 Molybdopterin oxidoreductase C0099_03580 PF01568 Molydopterin dinucleotide binding domain C0099_03580 PF04324 BFD-like [2Fe-2S] binding domain C0099_03580 PF04879 Molybdopterin oxidoreductase Fe4S4 domain C0099_03585 PF00067 Cytochrome P450 C0099_03590 PF00248 Aldo/keto reductase family C0099_03595 PF00069 Protein kinase domain C0099_03595 PF13672 Protein phosphatase 2C C0099_03600 PF07690 Major Facilitator Superfamily C0099_03605 PF13806 Rieske-like [2Fe-2S] domain C0099_03610 PF01077 Nitrite and sulphite reductase 4Fe-4S domain C0099_03610 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain C0099_03610 PF04324 BFD-like [2Fe-2S] binding domain C0099_03610 PF07992 Pyridine nucleotide-disulphide oxidoreductase C0099_03615 PF03886 Protein of unknown function (DUF330) C0099_03620 PF02470 C0099_03620 C0099_03625 PF00005 ABC transporter C0099_03630 PF02405 C0099_03630 C0099_03635 PF13437 HlyD family secretion protein C0099_03635 PF13533 Biotin-lipoyl like C0099_03640 PF00005 ABC transporter C0099_03640 PF12698 ABC-2 family transporter protein C0099_03645 PF12698 ABC-2 family transporter protein C0099_03655 PF02535 C0099_03655 C0099_03660 PF02353 Mycolic acid cyclopropane synthetase C0099_03665 PF00141 Peroxidase C0099_03670 PF12169 DNA polymerase III subunits gamma and tau domain III C0099_03670 PF12170 DNA polymerase III tau subunit V interacting with alpha C0099_03670 PF13177 DNA polymerase III, delta subunit C0099_03675 PF02575 YbaB/EbfC DNA-binding family C0099_03680 PF02132 RecR protein C0099_03680 PF13662 Toprim domain C0099_03685 PF00355 Rieske [2Fe-2S] domain C0099_03685 PF10399 Ubiquitinol-cytochrome C reductase Fe-S subunit TAT signal C0099_03690 PF00032 Cytochrome b(C-terminal)/b6/petD C0099_03690 PF00033 Cytochrome b(N-terminal)/b6/petB C0099_03695 PF02167 Cytochrome C1 family C0099_03700 PF00043 Glutathione S-transferase, C-terminal domain C0099_03700 PF02798 Glutathione S-transferase, N-terminal domain C0099_03705 PF04386 Stringent starvation protein B C0099_03710 PF05433 C0099_03710 C0099_03715 PF01266 FAD dependent oxidoreductase C0099_03720 PF00316 Fructose-1-6-bisphosphatase C0099_03725 PF00171 Aldehyde dehydrogenase family C0099_03725 PF01619 Proline dehydrogenase C0099_03725 PF14850 DNA-binding domain of Proline dehydrogenase C0099_03730 PF01103 Surface antigen C0099_03735 PF00240 Ubiquitin family C0099_03750 PF00005 ABC transporter C0099_03755 PF02687 C0099_03755 C0099_03760 PF16576 C0099_03760 C0099_03765 PF00440 Bacterial regulatory proteins, tetR family C0099_03770 PF00166 Chaperonin 10 Kd subunit C0099_03775 PF00118 TCP-1/cpn60 chaperonin family C0099_03780 PF00072 Response regulator receiver domain C0099_03780 PF00486 Transcriptional regulatory protein, C terminal C0099_03785 PF00512 His Kinase A (phospho-acceptor) domain C0099_03785 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase C0099_03785 PF08521 C0099_03785 C0099_03795 PF00589 Phage integrase family C0099_03805 PF13560 Helix-turn-helix domain C0099_03810 PF02384 N-6 DNA Methylase C0099_03810 PF12161 HsdM N-terminal domain C0099_03815 PF01420 Type I restriction modification DNA specificity domain C0099_03820 PF03235 C0099_03820 C0099_03825 PF04313 Type I restriction enzyme R protein N terminus (HSDR_N) C0099_03825 PF04851 Type III restriction enzyme, res subunit C0099_03825 PF11867 C0099_03825 C0099_03835 PF00892 EamA-like transporter family C0099_03845 PF00873 AcrB/AcrD/AcrF family C0099_03850 PF13437 HlyD family secretion protein C0099_03860 PF02321 Outer membrane efflux protein C0099_03865 PF11162 C0099_03865 C0099_03875 PF13670 C0099_03875 C0099_03880 PF03413 Peptidase propeptide and YPEB domain C0099_03885 PF00072 Response regulator receiver domain C0099_03885 PF00486 Transcriptional regulatory protein, C terminal C0099_03890 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase C0099_03895 PF00122 E1-E2 ATPase C0099_03895 PF00689 Cation transporting ATPase, C-terminus C0099_03895 PF00690 Cation transporter/ATPase, N-terminus C0099_03895 PF00702 haloacid dehalogenase-like hydrolase C0099_03900 PF03090 C0099_03900 C0099_03900 PF08708 Primase C terminal 1 (PriCT-1) C0099_03905 PF12728 Helix-turn-helix domain C0099_03915 PF00745 Glutamyl-tRNAGlu reductase, dimerisation domain C0099_03915 PF01488 Shikimate / quinate 5-dehydrogenase C0099_03915 PF05201 Glutamyl-tRNAGlu reductase, N-terminal domain C0099_03920 PF00472 RF-1 domain C0099_03920 PF03462 PCRF domain C0099_03925 PF05175 Methyltransferase small domain C0099_03930 PF00462 Glutaredoxin C0099_03940 PF00078 Reverse transcriptase (RNA-dependent DNA polymerase) C0099_03940 PF08388 C0099_03940 C0099_03945 PF03881 Fructosamine kinase C0099_03950 PF00206 Lyase C0099_03950 PF14698 Argininosuccinate lyase C-terminal C0099_03955 PF06580 C0099_03955 C0099_03960 PF00072 Response regulator receiver domain C0099_03960 PF04397 LytTr DNA-binding domain C0099_03965 PF00311 Phosphoenolpyruvate carboxylase C0099_03975 PF01379 Porphobilinogen deaminase, dipyromethane cofactor binding domain C0099_03975 PF03900 Porphobilinogen deaminase, C-terminal domain C0099_03980 PF02602 Uroporphyrinogen-III synthase HemD C0099_03985 PF04375 C0099_03985 C0099_03990 PF07219 C0099_03990 C0099_03995 PF01218 Coproporphyrinogen III oxidase C0099_04000 PF01071 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain C0099_04000 PF02843 Phosphoribosylglycinamide synthetase, C domain C0099_04000 PF02844 Phosphoribosylglycinamide synthetase, N domain C0099_04005 PF01808 AICARFT/IMPCHase bienzyme C0099_04005 PF02142 MGS-like domain C0099_04010 PF02954 Bacterial regulatory protein, Fis family C0099_04015 PF01207 Dihydrouridine synthase (Dus) C0099_04020 PF01494 FAD binding domain C0099_04025 PF00557 Metallopeptidase family M24 C0099_04025 PF05195 Aminopeptidase P, N-terminal domain C0099_04030 PF00483 Nucleotidyl transferase C0099_04035 PF01636 Phosphotransferase enzyme family C0099_04040 PF04453 Organic solvent tolerance protein C0099_04045 PF00639 PPIC-type PPIASE domain C0099_04045 PF09312 SurA N-terminal domain C0099_04050 PF04166 Pyridoxal phosphate biosynthetic protein PdxA C0099_04055 PF00398 Ribosomal RNA adenine dimethylase C0099_04060 PF01548 C0099_04060 C0099_04060 PF02371 C0099_04060 C0099_04065 PF11127 Protein of unknown function (DUF2892) C0099_04070 PF11127 Protein of unknown function (DUF2892) C0099_04075 PF00027 Cyclic nucleotide-binding domain C0099_04075 PF13545 Crp-like helix-turn-helix domain C0099_04080 PF03372 Endonuclease/Exonuclease/phosphatase family C0099_04085 PF01432 Peptidase family M3 C0099_04090 PF09955 C0099_04090 C0099_04095 PF07690 Major Facilitator Superfamily C0099_04100 PF01259 SAICAR synthetase C0099_04105 PF11902 C0099_04105 C0099_04110 PF00535 Glycosyl transferase family 2 C0099_04115 PF09335 C0099_04115 C0099_04120 PF13231 C0099_04120 C0099_04125 PF00691 OmpA family C0099_04125 PF13488 C0099_04125 C0099_04130 PF09837 Uncharacterized protein conserved in bacteria (DUF2064) C0099_04135 PF00535 Glycosyl transferase family 2 C0099_04140 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain C0099_04140 PF07992 Pyridine nucleotide-disulphide oxidoreductase C0099_04140 PF09335 C0099_04140 C0099_04145 PF04055 Radical SAM superfamily C0099_04145 PF12345 C0099_04145 C0099_04150 PF11249 C0099_04150 C0099_04165 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily C0099_04175 PF04542 Sigma-70 region 2 C0099_04175 PF08281 Sigma-70, region 4 C0099_04180 PF00206 Lyase C0099_04180 PF10415 Fumarase C C-terminus C0099_04185 PF00924 Mechanosensitive ion channel C0099_04190 PF06094 AIG2-like family C0099_04195 PF01116 Fructose-bisphosphate aldolase class-II C0099_04200 PF00162 Phosphoglycerate kinase C0099_04205 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain C0099_04205 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain C0099_04210 PF00456 Transketolase, thiamine diphosphate binding domain C0099_04210 PF02779 Transketolase, pyrimidine binding domain C0099_04210 PF02780 Transketolase, C-terminal domain C0099_04215 PF00485 Phosphoribulokinase / Uridine kinase family C0099_04220 PF00459 Inositol monophosphatase family C0099_04225 PF04452 RNA methyltransferase C0099_04230 PF00583 Acetyltransferase (GNAT) family C0099_04230 PF00696 Amino acid kinase family C0099_04235 PF04362 Bacterial Fe(2+) trafficking C0099_04240 PF01895 PhoU domain C0099_04245 PF06026 Ribose 5-phosphate isomerase A (phosphoriboisomerase A) C0099_04250 PF00994 Probable molybdopterin binding domain C0099_04250 PF03453 MoeA N-terminal region (domain I and II) C0099_04250 PF03454 MoeA C-terminal region (domain IV) C0099_04255 PF04305 C0099_04255 C0099_04260 PF00034 Cytochrome c C0099_04265 PF01926 50S ribosome-binding GTPase C0099_04270 PF00490 Delta-aminolevulinic acid dehydratase C0099_04275 PF13419 Haloacid dehalogenase-like hydrolase C0099_04280 PF04055 Radical SAM superfamily C0099_04280 PF06968 Biotin and Thiamin Synthesis associated domain C0099_04285 PF00156 Phosphoribosyl transferase domain C0099_04290 PF00588 SpoU rRNA Methylase family C0099_04295 PF01210 NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus C0099_04295 PF07479 NAD-dependent glycerol-3-phosphate dehydrogenase C-terminus C0099_04300 PF06347 Bacterial SH3 domain C0099_04305 PF02556 Preprotein translocase subunit SecB C0099_04310 PF00462 Glutaredoxin C0099_04315 PF00581 Rhodanese-like domain C0099_04320 PF01022 Bacterial regulatory protein, arsR family C0099_04325 PF00300 Histidine phosphatase superfamily (branch 1) C0099_04330 PF01551 Peptidase family M23 C0099_04335 PF03572 Peptidase family S41 C0099_04335 PF13180 PDZ domain C0099_04345 PF00899 ThiF family C0099_04350 PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain C0099_04350 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain C0099_04355 PF00501 AMP-binding enzyme C0099_04355 PF13193 AMP-binding enzyme C-terminal domain C0099_04360 PF00550 Phosphopantetheine attachment site C0099_04365 PF00459 Inositol monophosphatase family C0099_04370 PF01507 Phosphoadenosine phosphosulfate reductase family C0099_04375 PF00009 Elongation factor Tu GTP binding domain C0099_04375 PF01583 Adenylylsulphate kinase C0099_04380 PF00696 Amino acid kinase family C0099_04385 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain C0099_04385 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain C0099_04385 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain C0099_04390 PF00293 NUDIX domain C0099_04395 PF01337 Barstar (barnase inhibitor) C0099_04400 PF00545 ribonuclease C0099_04405 PF00072 Response regulator receiver domain C0099_04405 PF14559 Tetratricopeptide repeat C0099_04410 PF00152 tRNA synthetases class II (D, K and N) C0099_04410 PF01336 OB-fold nucleic acid binding domain C0099_04410 PF02938 GAD domain C0099_04415 PF09723 C0099_04415 C0099_04420 PF01478 Type IV leader peptidase family C0099_04420 PF06750 C0099_04420 C0099_04425 PF00482 Type II secretion system (T2SS), protein F C0099_04430 PF00437 Type II/IV secretion system protein C0099_04430 PF05157 Type II secretion system (T2SS), protein E, N-terminal domain C0099_04435 PF00571 CBS domain C0099_04435 PF01595 C0099_04435 C0099_04435 PF03471 Transporter associated domain C0099_04440 PF01578 C0099_04440 C0099_04445 PF00448 SRP54-type protein, GTPase domain C0099_04445 PF02881 SRP54-type protein, helical bundle domain C0099_04445 PF02978 Signal peptide binding domain C0099_04450 PF07264 Etoposide-induced protein 2 C0099_04455 PF00994 Probable molybdopterin binding domain C0099_04460 PF01863 Protein of unknown function DUF45 C0099_04465 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily C0099_04475 PF00140 Sigma-70 factor, region 1 C0099_04475 PF03979 Sigma-70 factor, region 1 C0099_04475 PF04539 Sigma-70 region 3 C0099_04475 PF04542 Sigma-70 region 2 C0099_04475 PF04545 Sigma-70, region 4 C0099_04475 PF04546 Sigma-70, non-essential region C0099_04480 PF01807 CHC2 zinc finger C0099_04480 PF08275 DNA primase catalytic core, N-terminal domain C0099_04480 PF08278 DNA primase DnaG DnaB-binding C0099_04480 PF10410 DnaB-helicase binding domain of primase C0099_04480 PF13662 Toprim domain C0099_04485 PF09424 Yqey-like protein C0099_04490 PF01165 Ribosomal protein S21 C0099_04495 PF00814 Glycoprotease family C0099_04500 PF02660 C0099_04500 C0099_04505 PF02152 Dihydroneopterin aldolase C0099_04510 PF00816 H-NS histone family C0099_04520 PF00665 Integrase core domain C0099_04520 PF13936 Helix-turn-helix domain C0099_04525 PF04073 Aminoacyl-tRNA editing domain C0099_04530 PF00589 Phage integrase family C0099_04530 PF02899 Phage integrase, N-terminal SAM-like domain C0099_04535 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain C0099_04540 PF00171 Aldehyde dehydrogenase family C0099_04545 PF06144 DNA polymerase III, delta subunit C0099_04545 PF14840 Processivity clamp loader gamma complex DNA pol III C-term C0099_04550 PF04390 Lipopolysaccharide-assembly C0099_04555 PF00133 tRNA synthetases class I (I, L, M and V) C0099_04555 PF08264 Anticodon-binding domain of tRNA C0099_04555 PF09334 tRNA synthetases class I (M) C0099_04555 PF13603 Leucyl-tRNA synthetase, Domain 2 C0099_04560 PF00580 UvrD/REP helicase N-terminal domain C0099_04560 PF13361 UvrD-like helicase C-terminal domain C0099_04565 PF00990 GGDEF domain C0099_04565 PF08448 PAS fold C0099_04565 PF13426 PAS domain C0099_04565 PF14827 Sensory domain of two-component sensor kinase C0099_04570 PF13614 AAA domain C0099_04575 PF00107 Zinc-binding dehydrogenase C0099_04575 PF08240 Alcohol dehydrogenase GroES-like domain C0099_04580 PF02811 PHP domain C0099_04580 PF07733 Bacterial DNA polymerase III alpha subunit C0099_04580 PF14579 Helix-hairpin-helix motif C0099_04585 PF00708 Acylphosphatase C0099_04590 PF00916 C0099_04590 C0099_04590 PF01740 STAS domain C0099_04595 PF01588 Putative tRNA binding domain C0099_04595 PF08264 Anticodon-binding domain of tRNA C0099_04595 PF09334 tRNA synthetases class I (M) C0099_04600 PF01883 Domain of unknown function DUF59 C0099_04600 PF10609 ParA/MinD ATPase like C0099_04605 PF00692 dUTPase C0099_04610 PF01276 Orn/Lys/Arg decarboxylase, major domain C0099_04610 PF03709 Orn/Lys/Arg decarboxylase, N-terminal domain C0099_04610 PF03711 Orn/Lys/Arg decarboxylase, C-terminal domain C0099_04615 PF00186 Dihydrofolate reductase C0099_04620 PF00303 Thymidylate synthase C0099_04650 PF01219 Prokaryotic diacylglycerol kinase C0099_04655 PF13439 Glycosyltransferase Family 4 C0099_04655 PF13692 Glycosyl transferases group 1 C0099_04660 PF12850 Calcineurin-like phosphoesterase superfamily domain C0099_04665 PF01494 FAD binding domain C0099_04670 PF10411 Disulfide bond isomerase protein N-terminus C0099_04670 PF13098 Thioredoxin-like domain C0099_04675 PF03562 MltA specific insert domain C0099_04675 PF06725 3D domain C0099_04680 PF05673 Protein of unknown function (DUF815) C0099_04685 PF00293 NUDIX domain C0099_04685 PF02581 Thiamine monophosphate synthase/TENI C0099_04690 PF03884 Domain of unknown function (DUF329) C0099_04695 PF07072 Protein of unknown function (DUF1342) C0099_04700 PF01121 Dephospho-CoA kinase C0099_04705 PF05036 Sporulation related domain C0099_04710 PF03309 Type III pantothenate kinase C0099_04715 PF02237 Biotin protein ligase C terminal domain C0099_04715 PF03099 Biotin/lipoate A/B protein ligase family C0099_04720 PF00072 Response regulator receiver domain C0099_04720 PF00158 Sigma-54 interaction domain C0099_04720 PF02954 Bacterial regulatory protein, Fis family C0099_04725 PF00512 His Kinase A (phospho-acceptor) domain C0099_04725 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase C0099_04725 PF08448 PAS fold C0099_04730 PF13511 C0099_04730 C0099_04735 PF00120 Glutamine synthetase, catalytic domain C0099_04735 PF03951 Glutamine synthetase, beta-Grasp domain C0099_04740 PF01545 Cation efflux family C0099_04740 PF16916 C0099_04740 C0099_04745 PF00581 Rhodanese-like domain C0099_04750 PF02445 Quinolinate synthetase A protein C0099_04755 PF03372 Endonuclease/Exonuclease/phosphatase family C0099_04760 PF13091 PLD-like domain C0099_04765 PF13380 CoA binding domain C0099_04770 PF00749 tRNA synthetases class I (E and Q), catalytic domain C0099_04775 PF01926 50S ribosome-binding GTPase C0099_04775 PF06071 Protein of unknown function (DUF933) C0099_04780 PF01195 Peptidyl-tRNA hydrolase C0099_04785 PF01386 Ribosomal L25p family C0099_04785 PF14693 Ribosomal protein TL5, C-terminal domain C0099_04790 PF13793 N-terminal domain of ribose phosphate pyrophosphokinase C0099_04790 PF14572 Phosphoribosyl synthetase-associated domain C0099_04800 PF00288 GHMP kinases N terminal domain C0099_04800 PF08544 GHMP kinases C terminal C0099_04805 PF03550 Outer membrane lipoprotein LolB C0099_04810 PF13432 Tetratricopeptide repeat C0099_04810 PF14559 Tetratricopeptide repeat C0099_04815 PF01149 Formamidopyrimidine-DNA glycosylase N-terminal domain C0099_04815 PF06827 Zinc finger found in FPG and IleRS C0099_04815 PF06831 Formamidopyrimidine-DNA glycosylase H2TH domain C0099_04820 PF00350 Dynamin family C0099_04825 PF12838 4Fe-4S dicluster domain C0099_04830 PF01467 Cytidylyltransferase C0099_04835 PF03602 Conserved hypothetical protein 95 C0099_04840 PF05193 Peptidase M16 inactive domain C0099_04845 PF00675 Insulinase (Peptidase family M16) C0099_04845 PF05193 Peptidase M16 inactive domain C0099_04850 PF00448 SRP54-type protein, GTPase domain C0099_04850 PF02881 SRP54-type protein, helical bundle domain C0099_04855 PF00005 ABC transporter C0099_04865 PF00520 Ion transport protein C0099_04870 PF14437 C0099_04870 C0099_04875 PF03734 L,D-transpeptidase catalytic domain C0099_04880 PF13673 Acetyltransferase (GNAT) domain C0099_04885 PF05742 C0099_04885 C0099_04890 PF16290 C0099_04890 C0099_04895 PF01571 Aminomethyltransferase folate-binding domain C0099_04900 PF02618 YceG-like family C0099_04905 PF02223 Thymidylate kinase C0099_04910 PF13177 DNA polymerase III, delta subunit C0099_04915 PF07238 PilZ domain C0099_04920 PF01026 TatD related DNase C0099_04925 PF12796 Ankyrin repeats (3 copies) C0099_04925 PF13606 Ankyrin repeat C0099_04930 PF01546 Peptidase family M20/M25/M40 C0099_04930 PF07687 Peptidase dimerisation domain C0099_04935 PF02687 C0099_04935 C0099_04940 PF01966 HD domain C0099_04940 PF13487 HD domain C0099_04945 PF02646 C0099_04945 C0099_04950 PF04055 Radical SAM superfamily C0099_04950 PF06463 Molybdenum Cofactor Synthesis C C0099_04950 PF13394 4Fe-4S single cluster domain C0099_04955 PF05362 Lon protease (S16) C-terminal proteolytic domain C0099_04955 PF13654 AAA domain C0099_04960 PF01176 Translation initiation factor 1A / IF-1 C0099_04965 PF01389 OmpA-like transmembrane domain C0099_04975 PF03706 C0099_04975 C0099_04980 PF00106 short chain dehydrogenase C0099_04985 PF01565 FAD binding domain C0099_04990 PF01040 UbiA prenyltransferase family C0099_04990 PF12710 haloacid dehalogenase-like hydrolase C0099_04995 PF00132 Bacterial transferase hexapeptide (six repeats) C0099_05005 PF14397 C0099_05005 C0099_05020 PF00155 Aminotransferase class I and II C0099_05025 PF00271 Helicase conserved C-terminal domain C0099_05025 PF02151 UvrB/uvrC motif C0099_05025 PF04851 Type III restriction enzyme, res subunit C0099_05025 PF12344 Ultra-violet resistance protein B C0099_05030 PF01451 Low molecular weight phosphotyrosine protein phosphatase C0099_05035 PF00392 Bacterial regulatory proteins, gntR family C0099_05035 PF07729 FCD domain C0099_05040 PF03480 Bacterial extracellular solute-binding protein, family 7 C0099_05045 PF04290 C0099_05045 C0099_05050 PF06808 C0099_05050 C0099_05055 PF01019 Gamma-glutamyltranspeptidase C0099_05060 PF00575 S1 RNA binding domain C0099_05060 PF10150 Ribonuclease E/G family C0099_05065 PF00849 RNA pseudouridylate synthase C0099_05065 PF01479 S4 domain C0099_05070 PF13419 Haloacid dehalogenase-like hydrolase C0099_05075 PF02545 Maf-like protein C0099_05080 PF02620 C0099_05080 C0099_05085 PF01783 Ribosomal L32p protein family C0099_05090 PF02504 Fatty acid synthesis protein C0099_05095 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal C0099_05095 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C0099_05100 PF00698 Acyl transferase domain C0099_05105 PF13561 Enoyl-(Acyl carrier protein) reductase C0099_05110 PF00550 Phosphopantetheine attachment site C0099_05115 PF00109 Beta-ketoacyl synthase, N-terminal domain C0099_05115 PF02801 Beta-ketoacyl synthase, C-terminal domain C0099_05125 PF00890 FAD binding domain C0099_05125 PF02910 Fumarate reductase flavoprotein C-term C0099_05130 PF04542 Sigma-70 region 2 C0099_05130 PF08281 Sigma-70, region 4 C0099_05135 PF03872 Anti sigma-E protein RseA, N-terminal domain C0099_05140 PF03888 MucB/RseB family C0099_05140 PF17188 C0099_05140 C0099_05145 PF04246 C0099_05145 C0099_05150 PF13180 PDZ domain C0099_05150 PF13365 Trypsin-like peptidase domain C0099_05155 PF05768 Glutaredoxin-like domain (DUF836) C0099_05160 PF00009 Elongation factor Tu GTP binding domain C0099_05160 PF00679 Elongation factor G C-terminus C0099_05160 PF03144 Elongation factor Tu domain 2 C0099_05160 PF06421 GTP-binding protein LepA C-terminus C0099_05165 PF00717 Peptidase S24-like C0099_05165 PF10502 Signal peptidase, peptidase S26 C0099_05170 PF16137 C0099_05170 C0099_05175 PF00035 Double-stranded RNA binding motif C0099_05175 PF14622 Ribonuclease-III-like C0099_05180 PF01926 50S ribosome-binding GTPase C0099_05180 PF07650 KH domain C0099_05185 PF02565 Recombination protein O C terminal C0099_05185 PF11967 Recombination protein O N terminal C0099_05190 PF03740 Pyridoxal phosphate biosynthesis protein PdxJ C0099_05195 PF01648 4'-phosphopantetheinyl transferase superfamily C0099_05200 PF00933 Glycosyl hydrolase family 3 N terminal domain C0099_05205 PF01541 GIY-YIG catalytic domain C0099_05205 PF02151 UvrB/uvrC motif C0099_05205 PF08459 UvrC Helix-hairpin-helix N-terminal C0099_05205 PF14520 Helix-hairpin-helix domain C0099_05210 PF01066 CDP-alcohol phosphatidyltransferase C0099_05215 PF00563 EAL domain C0099_05215 PF00990 GGDEF domain C0099_05215 PF13426 PAS domain C0099_05220 PF00293 NUDIX domain C0099_05220 PF14803 Nudix N-terminal C0099_05225 PF00990 GGDEF domain C0099_05225 PF08668 HDOD domain C0099_05230 PF05247 Flagellar transcriptional activator (FlhD) C0099_05235 PF05280 Flagellar transcriptional activator (FlhC) C0099_05240 PF01618 C0099_05240 C0099_05245 PF00691 OmpA family C0099_05245 PF13677 C0099_05245 C0099_05250 PF01739 CheR methyltransferase, SAM binding domain C0099_05250 PF03705 CheR methyltransferase, all-alpha domain C0099_05255 PF01339 CheB methylesterase C0099_05260 PF00072 Response regulator receiver domain C0099_05260 PF01584 CheW-like domain C0099_05265 PF00072 Response regulator receiver domain C0099_05265 PF01584 CheW-like domain C0099_05270 PF00072 Response regulator receiver domain C0099_05275 PF04344 Chemotaxis phosphatase, CheZ C0099_05280 PF01584 CheW-like domain C0099_05280 PF01627 Hpt domain C0099_05280 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase C0099_05280 PF02895 Signal transducing histidine kinase, homodimeric domain C0099_05285 PF00923 Transaldolase C0099_05290 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain C0099_05290 PF02777 Iron/manganese superoxide dismutases, C-terminal domain C0099_05295 PF02601 C0099_05295 C0099_05295 PF13742 C0099_05295 C0099_05300 PF16868 C0099_05300 C0099_05305 PF08905 C0099_05305 C0099_05310 PF06808 C0099_05310 C0099_05315 PF01618 C0099_05315 C0099_05320 PF02472 Biopolymer transport protein ExbD/TolR C0099_05325 PF02606 Tetraacyldisaccharide-1-P 4'-kinase C0099_05330 PF03966 Trm112p-like protein C0099_05335 PF02348 Cytidylyltransferase C0099_05340 PF00406 Adenylate kinase C0099_05340 PF05191 Adenylate kinase, active site lid C0099_05345 PF00365 Phosphofructokinase C0099_05350 PF00884 Sulfatase C0099_05355 PF13649 Methyltransferase domain C0099_05360 PF02028 BCCT family transporter C0099_05365 PF13609 Gram-negative porin C0099_05370 PF02028 BCCT family transporter C0099_05375 PF01544 CorA-like Mg2+ transporter protein C0099_05380 PF01967 MoaC family C0099_05385 PF01435 Peptidase family M48 C0099_05385 PF14559 Tetratricopeptide repeat C0099_05390 PF01206 Sulfurtransferase TusA C0099_05395 PF00133 tRNA synthetases class I (I, L, M and V) C0099_05395 PF08264 Anticodon-binding domain of tRNA C0099_05395 PF10458 Valyl tRNA synthetase tRNA binding arm C0099_05400 PF06293 Lipopolysaccharide kinase (Kdo/WaaP) family C0099_05410 PF04364 DNA polymerase III chi subunit, HolC C0099_05415 PF00883 Cytosol aminopeptidase family, catalytic domain C0099_05415 PF02789 Cytosol aminopeptidase family, N-terminal domain C0099_05420 PF03739 C0099_05420 C0099_05425 PF03739 C0099_05425 C0099_05430 PF01245 Ribosomal protein L19 C0099_05435 PF01746 tRNA (Guanine-1)-methyltransferase C0099_05440 PF01782 RimM N-terminal domain C0099_05440 PF05239 PRC-barrel domain C0099_05445 PF00886 Ribosomal protein S16 C0099_05450 PF03358 NADPH-dependent FMN reductase C0099_05455 PF09842 C0099_05455 C0099_05460 PF01066 CDP-alcohol phosphatidyltransferase C0099_05465 PF01450 Acetohydroxy acid isomeroreductase, catalytic domain C0099_05465 PF07991 Acetohydroxy acid isomeroreductase, catalytic domain C0099_05470 PF10369 Small subunit of acetolactate synthase C0099_05470 PF13710 ACT domain C0099_05475 PF00205 Thiamine pyrophosphate enzyme, central domain C0099_05475 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain C0099_05475 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain C0099_05480 PF06271 C0099_05480 C0099_05485 PF00122 E1-E2 ATPase C0099_05485 PF00689 Cation transporting ATPase, C-terminus C0099_05485 PF00690 Cation transporter/ATPase, N-terminus C0099_05485 PF00702 haloacid dehalogenase-like hydrolase C0099_05490 PF01433 Peptidase family M1 C0099_05490 PF11940 Domain of unknown function (DUF3458) C0099_05490 PF17432 C0099_05490 C0099_05495 PF00920 Dehydratase family C0099_05500 PF12831 FAD dependent oxidoreductase C0099_05505 PF01565 FAD binding domain C0099_05505 PF02913 FAD linked oxidases, C-terminal domain C0099_05510 PF06808 C0099_05510 C0099_05515 PF16868 C0099_05515 C0099_05520 PF02668 Taurine catabolism dioxygenase TauD, TfdA family C0099_05525 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family C0099_05525 PF03466 LysR substrate binding domain C0099_05535 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain C0099_05535 PF08447 PAS fold C0099_05535 PF08448 PAS fold C0099_05535 PF13426 PAS domain C0099_05540 PF02569 Pantoate-beta-alanine ligase C0099_05545 PF02548 Ketopantoate hydroxymethyltransferase C0099_05550 PF01712 Deoxynucleoside kinase C0099_05555 PF01288 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK) C0099_05560 PF01743 Poly A polymerase head domain C0099_05560 PF12626 Polymerase A arginine-rich C-terminus C0099_05560 PF12627 Probable RNA and SrmB- binding site of polymerase A C0099_05565 PF12710 haloacid dehalogenase-like hydrolase C0099_05570 PF00308 Bacterial dnaA protein C0099_05575 PF01594 C0099_05575 C0099_05580 PF00586 AIR synthase related protein, N-terminal domain C0099_05580 PF02769 AIR synthase related protein, C-terminal domain C0099_05585 PF00106 short chain dehydrogenase C0099_05595 PF05016 Plasmid stabilisation system protein C0099_05600 PF01715 IPP transferase C0099_05605 PF09335 C0099_05605 C0099_05610 PF00873 AcrB/AcrD/AcrF family C0099_05615 PF16576 C0099_05615 C0099_05620 PF00463 Isocitrate lyase family C0099_05625 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain C0099_05625 PF02805 Metal binding domain of Ada C0099_05625 PF12833 Helix-turn-helix domain C0099_05630 PF12973 ChrR Cupin-like domain C0099_05635 PF02566 OsmC-like protein C0099_05635 PF12146 Putative lysophospholipase C0099_05640 PF06977 SdiA-regulated C0099_05655 PF00005 ABC transporter C0099_05660 PF03649 C0099_05660 C0099_05670 PF07927 YcfA-like protein C0099_05675 PF05534 C0099_05675 C0099_05680 PF00665 Integrase core domain C0099_05680 PF13936 Helix-turn-helix domain C0099_05685 PF08534 Redoxin C0099_05690 PF07295 C0099_05690 C0099_05695 PF00665 Integrase core domain C0099_05695 PF13936 Helix-turn-helix domain C0099_05705 PF01934 Protein of unknown function DUF86 C0099_05710 PF01909 Nucleotidyltransferase domain C0099_05715 PF02566 OsmC-like protein C0099_05715 PF02624 YcaO-like family C0099_05720 PF00441 Acyl-CoA dehydrogenase, C-terminal domain C0099_05720 PF02770 Acyl-CoA dehydrogenase, middle domain C0099_05720 PF02771 Acyl-CoA dehydrogenase, N-terminal domain C0099_05725 PF09994 Uncharacterized alpha/beta hydrolase domain (DUF2235) C0099_05730 PF00296 Luciferase-like monooxygenase C0099_05735 PF00724 NADH:flavin oxidoreductase / NADH oxidase family C0099_05755 PF00072 Response regulator receiver domain C0099_05755 PF00512 His Kinase A (phospho-acceptor) domain C0099_05755 PF00989 PAS fold C0099_05755 PF01627 Hpt domain C0099_05755 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase C0099_05755 PF03707 C0099_05755 C0099_05755 PF08447 PAS fold C0099_05760 PF00072 Response regulator receiver domain C0099_05760 PF01966 HD domain C0099_05765 PF01641 SelR domain C0099_05770 PF01625 Peptide methionine sulfoxide reductase C0099_05775 PF08668 HDOD domain C0099_05780 PF03928 Domain of unknown function (DUF336) C0099_05785 PF05161 MOFRL family C0099_05785 PF13660 Domain of unknown function (DUF4147) C0099_05790 PF01261 Xylose isomerase-like TIM barrel C0099_05795 PF00205 Thiamine pyrophosphate enzyme, central domain C0099_05795 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain C0099_05795 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain C0099_05800 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family C0099_05800 PF03466 LysR substrate binding domain C0099_05810 PF05099 Tellurite resistance protein TerB C0099_05815 PF00892 EamA-like transporter family C0099_05820 PF03480 Bacterial extracellular solute-binding protein, family 7 C0099_05825 PF04290 C0099_05825 C0099_05830 PF06808 C0099_05830 C0099_05835 PF01425 Amidase C0099_05840 PF00313 'Cold-shock' DNA-binding domain C0099_05845 PF07804 HipA-like C-terminal domain C0099_05845 PF13657 HipA N-terminal domain C0099_05850 PF01381 Helix-turn-helix C0099_05860 PF00919 Uncharacterized protein family UPF0004 C0099_05860 PF01938 TRAM domain C0099_05860 PF04055 Radical SAM superfamily C0099_05865 PF02562 PhoH-like protein C0099_05870 PF02130 Uncharacterized protein family UPF0054 C0099_05875 PF00571 CBS domain C0099_05875 PF03471 Transporter associated domain C0099_05880 PF00795 Carbon-nitrogen hydrolase C0099_05885 PF02091 Glycyl-tRNA synthetase alpha subunit C0099_05890 PF02092 C0099_05890 C0099_05890 PF05746 DALR anticodon binding domain C0099_05895 PF13242 HAD-hyrolase-like C0099_05900 PF01553 Acyltransferase C0099_05905 PF01610 C0099_05905 C0099_05905 PF13542 C0099_05905 C0099_05910 PF09361 C0099_05910 C0099_05915 PF00378 Enoyl-CoA hydratase/isomerase family C0099_05920 PF03968 OstA-like protein C0099_05925 PF06835 Lipopolysaccharide-assembly, LptC-related C0099_05935 PF00571 CBS domain C0099_05935 PF01380 SIS domain C0099_05940 PF00005 ABC transporter C0099_05945 PF02405 C0099_05945 C0099_05950 PF02470 C0099_05950 C0099_05955 PF04333 C0099_05955 C0099_05960 PF05494 Toluene tolerance, Ttg2 C0099_05965 PF13466 STAS domain C0099_05970 PF00005 ABC transporter C0099_05975 PF01061 C0099_05975 C0099_05980 PF01722 BolA-like protein C0099_05985 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) C0099_05990 PF01272 Transcription elongation factor, GreA/GreB, C-term C0099_05990 PF14760 Rnk N-terminus C0099_05995 PF01634 ATP phosphoribosyltransferase C0099_06000 PF00815 Histidinol dehydrogenase C0099_06010 PF00078 Reverse transcriptase (RNA-dependent DNA polymerase) C0099_06010 PF08388 C0099_06010 C0099_06015 PF00155 Aminotransferase class I and II C0099_06020 PF00475 Imidazoleglycerol-phosphate dehydratase C0099_06025 PF00117 Glutamine amidotransferase class-I C0099_06030 PF00977 Histidine biosynthesis protein C0099_06035 PF00977 Histidine biosynthesis protein C0099_06040 PF01502 Phosphoribosyl-AMP cyclohydrolase C0099_06045 PF01503 Phosphoribosyl-ATP pyrophosphohydrolase C0099_06050 PF01230 HIT domain C0099_06055 PF02416 mttA/Hcf106 family C0099_06060 PF02416 mttA/Hcf106 family C0099_06065 PF00902 Sec-independent protein translocase protein (TatC) C0099_06070 PF13180 PDZ domain C0099_06070 PF13365 Trypsin-like peptidase domain C0099_06075 PF01784 NIF3 (NGG1p interacting factor 3) C0099_06080 PF00549 CoA-ligase C0099_06080 PF08442 ATP-grasp domain C0099_06085 PF00549 CoA-ligase C0099_06085 PF02629 CoA binding domain C0099_06090 PF00498 FHA domain C0099_06095 PF12706 Beta-lactamase superfamily domain C0099_06100 PF00834 Ribulose-phosphate 3 epimerase family C0099_06105 PF13419 Haloacid dehalogenase-like hydrolase C0099_06110 PF00425 chorismate binding enzyme C0099_06110 PF04715 Anthranilate synthase component I, N terminal region C0099_06115 PF00202 Aminotransferase class-III C0099_06120 PF05853 Prokaryotic protein of unknown function (DUF849) C0099_06125 PF00117 Glutamine amidotransferase class-I C0099_06130 PF00591 Glycosyl transferase family, a/b domain C0099_06130 PF02885 Glycosyl transferase family, helical bundle domain C0099_06135 PF00218 Indole-3-glycerol phosphate synthase C0099_06140 PF04357 C0099_06140 C0099_06145 PF01625 Peptide methionine sulfoxide reductase C0099_06150 PF00270 DEAD/DEAH box helicase C0099_06150 PF00271 Helicase conserved C-terminal domain C0099_06150 PF00570 HRDC domain C0099_06150 PF09382 RQC domain C0099_06150 PF16124 C0099_06150 C0099_06160 PF01467 Cytidylyltransferase C0099_06165 PF02310 B12 binding domain C0099_06165 PF13411 MerR HTH family regulatory protein C0099_06175 PF13450 NAD(P)-binding Rossmann-like domain C0099_06180 PF07103 C0099_06180 C0099_06185 PF02353 Mycolic acid cyclopropane synthetase C0099_06190 PF16036 C0099_06190 C0099_06195 PF13347 MFS/sugar transport protein C0099_06200 PF12915 C0099_06200 C0099_06205 PF00106 short chain dehydrogenase C0099_06210 PF12680 SnoaL-like domain C0099_06215 PF00116 Cytochrome C oxidase subunit II, periplasmic domain C0099_06215 PF02790 Cytochrome C oxidase subunit II, transmembrane domain C0099_06215 PF13442 Cytochrome C oxidase, cbb3-type, subunit III C0099_06220 PF00115 Cytochrome C and Quinol oxidase polypeptide I C0099_06225 PF04442 Cytochrome c oxidase assembly protein CtaG/Cox11 C0099_06230 PF11174 C0099_06230 C0099_06235 PF00510 Cytochrome c oxidase subunit III C0099_06240 PF11137 C0099_06240 C0099_06245 PF02104 C0099_06245 C0099_06255 PF02628 C0099_06255 C0099_06260 PF01040 UbiA prenyltransferase family C0099_06265 PF02630 SCO1/SenC C0099_06275 PF13419 Haloacid dehalogenase-like hydrolase C0099_06280 PF13489 Methyltransferase domain C0099_06285 PF00691 OmpA family C0099_06290 PF01979 Amidohydrolase family C0099_06295 PF00521 DNA gyrase/topoisomerase IV, subunit A C0099_06295 PF03989 DNA gyrase C-terminal domain, beta-propeller C0099_06300 PF00266 Aminotransferase class-V C0099_06305 PF00800 Prephenate dehydratase C0099_06305 PF01817 Chorismate mutase type II C0099_06305 PF01842 ACT domain C0099_06310 PF00155 Aminotransferase class I and II C0099_06315 PF02153 Prephenate dehydrogenase C0099_06320 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) C0099_06320 PF02224 Cytidylate kinase C0099_06325 PF00575 S1 RNA binding domain C0099_06330 PF00216 Bacterial DNA-binding protein C0099_06335 PF06305 C0099_06335 C0099_06340 PF13432 Tetratricopeptide repeat C0099_06345 PF00291 Pyridoxal-phosphate dependent enzyme C0099_06360 PF07027 C0099_06360 C0099_06365 PF10108 Predicted 3'-5' exonuclease related to the exonuclease domain of PolB C0099_06375 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) C0099_06375 PF02824 TGS domain C0099_06375 PF03129 Anticodon binding domain C0099_06375 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain C0099_06380 PF00707 Translation initiation factor IF-3, C-terminal domain C0099_06380 PF05198 Translation initiation factor IF-3, N-terminal domain C0099_06385 PF01632 Ribosomal protein L35 C0099_06390 PF00453 Ribosomal protein L20 C0099_06395 PF01409 tRNA synthetases class II core domain (F) C0099_06395 PF02912 Aminoacyl tRNA synthetase class II, N-terminal domain C0099_06400 PF01588 Putative tRNA binding domain C0099_06400 PF03147 Ferredoxin-fold anticodon binding domain C0099_06400 PF03483 B3/4 domain C0099_06400 PF03484 tRNA synthetase B5 domain C0099_06405 PF00216 Bacterial DNA-binding protein C0099_06410 PF13411 MerR HTH family regulatory protein C0099_06420 PF00551 Formyl transferase C0099_06425 PF00497 Bacterial extracellular solute-binding proteins, family 3 C0099_06435 PF16868 C0099_06435 C0099_06440 PF00497 Bacterial extracellular solute-binding proteins, family 3 C0099_06445 PF00528 Binding-protein-dependent transport system inner membrane component C0099_06450 PF00005 ABC transporter C0099_06455 PF00528 Binding-protein-dependent transport system inner membrane component C0099_06465 PF09997 C0099_06465 C0099_06470 PF00082 Subtilase family C0099_06480 PF05681 C0099_06480 C0099_06480 PF05683 Fumarase C-terminus C0099_06485 PF00501 AMP-binding enzyme C0099_06485 PF13193 AMP-binding enzyme C-terminal domain C0099_06485 PF16177 C0099_06485 C0099_06490 PF00929 Exonuclease C0099_06495 PF00474 Sodium:solute symporter family C0099_06505 PF00571 CBS domain C0099_06505 PF01769 Divalent cation transporter C0099_06505 PF03448 MgtE intracellular N domain C0099_06510 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain C0099_06510 PF08447 PAS fold C0099_06515 PF00512 His Kinase A (phospho-acceptor) domain C0099_06515 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase C0099_06520 PF00072 Response regulator receiver domain C0099_06525 PF00072 Response regulator receiver domain C0099_06525 PF00563 EAL domain C0099_06525 PF00989 PAS fold C0099_06525 PF00990 GGDEF domain C0099_06525 PF01590 GAF domain C0099_06525 PF13426 PAS domain C0099_06530 PF01019 Gamma-glutamyltranspeptidase C0099_06535 PF01161 Phosphatidylethanolamine-binding protein C0099_06540 PF00364 Biotin-requiring enzyme C0099_06540 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain C0099_06540 PF07992 Pyridine nucleotide-disulphide oxidoreductase C0099_06545 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) C0099_06545 PF00364 Biotin-requiring enzyme C0099_06545 PF02817 e3 binding domain C0099_06550 PF00456 Transketolase, thiamine diphosphate binding domain C0099_06555 PF00512 His Kinase A (phospho-acceptor) domain C0099_06555 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase C0099_06555 PF08448 PAS fold C0099_06555 PF13188 PAS domain C0099_06560 PF00072 Response regulator receiver domain C0099_06560 PF00196 Bacterial regulatory proteins, luxR family C0099_06565 PF00999 Sodium/hydrogen exchanger family C0099_06565 PF03471 Transporter associated domain C0099_06570 PF00763 Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain C0099_06570 PF02882 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain C0099_06575 PF00731 AIR carboxylase C0099_06580 PF02222 ATP-grasp domain C0099_06585 PF01300 Telomere recombination C0099_06585 PF03481 Putative GTP-binding controlling metal-binding C0099_06595 PF06527 C0099_06595 C0099_06600 PF13401 AAA domain C0099_06605 PF00665 Integrase core domain C0099_06605 PF08722 TnsA endonuclease N terminal C0099_06605 PF09299 Mu transposase, C-terminal C0099_06625 PF00239 Resolvase, N terminal domain C0099_06630 PF11185 C0099_06630 C0099_06640 PF13086 AAA domain C0099_06640 PF13087 AAA domain C0099_06640 PF13195 C0099_06640 C0099_06650 PF04221 RelB antitoxin C0099_06655 PF15738 C0099_06655 C0099_06665 PF13419 Haloacid dehalogenase-like hydrolase C0099_06670 PF00149 Calcineurin-like phosphoesterase C0099_06675 PF00005 ABC transporter C0099_06680 PF00528 Binding-protein-dependent transport system inner membrane component C0099_06685 PF12974 ABC transporter, phosphonate, periplasmic substrate-binding protein C0099_06690 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family C0099_06690 PF03466 LysR substrate binding domain C0099_06700 PF00892 EamA-like transporter family C0099_06710 PF00873 AcrB/AcrD/AcrF family C0099_06715 PF13437 HlyD family secretion protein C0099_06725 PF02321 Outer membrane efflux protein C0099_06730 PF11162 C0099_06730 C0099_06740 PF13670 C0099_06740 C0099_06745 PF03413 Peptidase propeptide and YPEB domain C0099_06750 PF00072 Response regulator receiver domain C0099_06750 PF00486 Transcriptional regulatory protein, C terminal C0099_06755 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase C0099_06760 PF00122 E1-E2 ATPase C0099_06760 PF00690 Cation transporter/ATPase, N-terminus C0099_06760 PF00702 haloacid dehalogenase-like hydrolase C0099_06765 PF07804 HipA-like C-terminal domain C0099_06770 PF13560 Helix-turn-helix domain C0099_06775 PF07804 HipA-like C-terminal domain C0099_06780 PF13560 Helix-turn-helix domain C0099_06790 PF04055 Radical SAM superfamily C0099_06790 PF13186 Iron-sulfur cluster-binding domain C0099_06795 PF00916 C0099_06795 C0099_06795 PF01740 STAS domain C0099_06805 PF04143 C0099_06805 C0099_06810 PF01022 Bacterial regulatory protein, arsR family C0099_06815 PF00753 Metallo-beta-lactamase superfamily C0099_06820 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region C0099_06820 PF01872 RibD C-terminal domain C0099_06825 PF03477 ATP cone domain C0099_06830 PF00464 Serine hydroxymethyltransferase C0099_06835 PF03480 Bacterial extracellular solute-binding protein, family 7 C0099_06840 PF03480 Bacterial extracellular solute-binding protein, family 7 C0099_06845 PF00300 Histidine phosphatase superfamily (branch 1) C0099_06850 PF06808 C0099_06850 C0099_06855 PF04290 C0099_06855 C0099_06860 PF01523 Putative modulator of DNA gyrase C0099_06865 PF04751 Protein of unknown function (DUF615) C0099_06870 PF00994 Probable molybdopterin binding domain C0099_06875 PF00793 DAHP synthetase I family C0099_06880 PF16868 C0099_06880 C0099_06885 PF06808 C0099_06885 C0099_06890 PF01923 Cobalamin adenosyltransferase C0099_06895 PF00512 His Kinase A (phospho-acceptor) domain C0099_06895 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase C0099_06900 PF00072 Response regulator receiver domain C0099_06900 PF00486 Transcriptional regulatory protein, C terminal C0099_06905 PF01411 tRNA synthetases class II (A) C0099_06905 PF02272 DHHA1 domain C0099_06905 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain C0099_06910 PF00563 EAL domain C0099_06910 PF08668 HDOD domain C0099_06915 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain C0099_06915 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I C0099_06915 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II C0099_06915 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III C0099_06920 PF00561 alpha/beta hydrolase fold C0099_06925 PF01063 Aminotransferase class IV C0099_06930 PF00571 CBS domain C0099_06935 PF04400 C0099_06935 C0099_06940 PF00111 2Fe-2S iron-sulfur cluster binding domain C0099_06940 PF00175 Oxidoreductase NAD-binding domain C0099_06940 PF00970 Oxidoreductase FAD-binding domain C0099_06945 PF02508 C0099_06945 C0099_06950 PF02508 C0099_06950 C0099_06955 PF04205 FMN-binding domain C0099_06960 PF03116 C0099_06960 C0099_06965 PF05896 C0099_06965 C0099_06965 PF11973 C0099_06965 C0099_06970 PF00293 NUDIX domain C0099_06980 PF03054 tRNA methyl transferase C0099_06990 PF09835 C0099_06990 C0099_06995 PF00300 Histidine phosphatase superfamily (branch 1) C0099_07000 PF01928 CYTH domain C0099_07000 PF05235 CHAD domain C0099_07005 PF03710 Glutamate-ammonia ligase adenylyltransferase C0099_07005 PF08335 GlnD PII-uridylyltransferase C0099_07010 PF13116 C0099_07010 C0099_07010 PF13502 C0099_07010 C0099_07015 PF00795 Carbon-nitrogen hydrolase C0099_07020 PF01523 Putative modulator of DNA gyrase C0099_07025 PF04519 C0099_07025 C0099_07030 PF01464 Transglycosylase SLT domain C0099_07035 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) C0099_07035 PF03129 Anticodon binding domain C0099_07035 PF04073 Aminoacyl-tRNA editing domain C0099_07040 PF00293 NUDIX domain C0099_07045 PF08750 C0099_07045 C0099_07050 PF03232 C0099_07050 C0099_07055 PF02566 OsmC-like protein C0099_07060 PF00572 Ribosomal protein L13 C0099_07065 PF00380 Ribosomal protein S9/S16 C0099_07070 PF01118 Semialdehyde dehydrogenase, NAD binding domain C0099_07070 PF02774 Semialdehyde dehydrogenase, dimerisation domain C0099_07075 PF01521 Iron-sulphur cluster biosynthesis C0099_07080 PF01551 Peptidase family M23 C0099_07085 PF00579 tRNA synthetases class I (W and Y) C0099_07085 PF01479 S4 domain C0099_07115 PF16868 C0099_07115 C0099_07120 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain C0099_07120 PF07497 Rho termination factor, RNA-binding domain C0099_07120 PF07498 Rho termination factor, N-terminal domain C0099_07125 PF00085 Thioredoxin C0099_07130 PF00037 4Fe-4S binding domain C0099_07130 PF11953 Domain of unknown function (DUF3470) C0099_07130 PF12800 4Fe-4S binding domain C0099_07140 PF01264 Chorismate synthase C0099_07145 PF12832 MFS_1 like family C0099_07150 PF01435 Peptidase family M48 C0099_07155 PF00330 Aconitase family (aconitate hydratase) C0099_07160 PF08085 C0099_07160 C0099_07165 PF00694 Aconitase C-terminal domain C0099_07170 PF00180 Isocitrate/isopropylmalate dehydrogenase C0099_07175 PF01118 Semialdehyde dehydrogenase, NAD binding domain C0099_07175 PF02774 Semialdehyde dehydrogenase, dimerisation domain C0099_07185 PF02361 Cobalt transport protein C0099_07190 PF01416 tRNA pseudouridine synthase C0099_07195 PF00697 N-(5'phosphoribosyl)anthranilate (PRA) isomerase C0099_07200 PF00291 Pyridoxal-phosphate dependent enzyme C0099_07205 PF00290 Tryptophan synthase alpha chain C0099_07210 PF01039 Carboxyl transferase domain C0099_07215 PF08245 Mur ligase middle domain C0099_07220 PF05036 Sporulation related domain C0099_07225 PF02674 C0099_07225 C0099_07230 PF00156 Phosphoribosyl transferase domain C0099_07230 PF13522 Glutamine amidotransferase domain C0099_07235 PF01053 Cys/Met metabolism PLP-dependent enzyme C0099_07240 PF00149 Calcineurin-like phosphoesterase C0099_07245 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD C0099_07250 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD C0099_07255 PF01406 tRNA synthetases class I (C) catalytic domain C0099_07255 PF09190 DALR domain C0099_07260 PF03703 C0099_07260 C0099_07265 PF00226 DnaJ domain C0099_07265 PF00684 DnaJ central domain C0099_07265 PF01556 DnaJ C terminal domain C0099_07270 PF00012 Hsp70 protein C0099_07275 PF01025 GrpE C0099_07280 PF00027 Cyclic nucleotide-binding domain C0099_07280 PF00069 Protein kinase domain C0099_07290 PF00762 Ferrochelatase C0099_07295 PF01628 HrcA protein C terminal domain C0099_07295 PF03444 Winged helix-turn-helix transcription repressor, HrcA DNA-binding C0099_07300 PF01513 ATP-NAD kinase C0099_07305 PF02463 RecF/RecN/SMC N terminal domain C0099_07310 PF01475 Ferric uptake regulator family C0099_07315 PF04355 SmpA / OmlA family C0099_07320 PF01113 Dihydrodipicolinate reductase, N-terminus C0099_07320 PF05173 Dihydrodipicolinate reductase, C-terminus C0099_07325 PF00117 Glutamine amidotransferase class-I C0099_07325 PF00988 Carbamoyl-phosphate synthase small chain, CPSase domain C0099_07330 PF02142 MGS-like domain C0099_07330 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain C0099_07330 PF02787 Carbamoyl-phosphate synthetase large chain, oligomerisation domain C0099_07335 PF01272 Transcription elongation factor, GreA/GreB, C-term C0099_07335 PF03449 Transcription elongation factor, N-terminal C0099_07340 PF13664 C0099_07340 C0099_07345 PF01985 CRS1 / YhbY (CRM) domain C0099_07350 PF01728 FtsJ-like methyltransferase C0099_07355 PF01323 DSBA-like thioredoxin domain C0099_07360 PF04016 Domain of unknown function (DUF364) C0099_07360 PF13938 Domain of unknown function (DUF4213) C0099_07365 PF02515 CoA-transferase family III C0099_07370 PF00004 ATPase family associated with various cellular activities (AAA) C0099_07370 PF01434 Peptidase family M41 C0099_07370 PF06480 FtsH Extracellular C0099_07375 PF00809 Pterin binding enzyme C0099_07380 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain C0099_07380 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I C0099_07380 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II C0099_07380 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III C0099_07385 PF12849 PBP superfamily domain C0099_07390 PF00528 Binding-protein-dependent transport system inner membrane component C0099_07395 PF00528 Binding-protein-dependent transport system inner membrane component C0099_07400 PF00005 ABC transporter C0099_07405 PF00121 Triosephosphate isomerase C0099_07410 PF03840 Preprotein translocase SecG subunit C0099_07420 PF00293 NUDIX domain C0099_07425 PF01205 Uncharacterized protein family UPF0029 C0099_07425 PF09186 Domain of unknown function (DUF1949) C0099_07430 PF01909 Nucleotidyltransferase domain C0099_07430 PF01966 HD domain C0099_07430 PF08335 GlnD PII-uridylyltransferase C0099_07435 PF00557 Metallopeptidase family M24 C0099_07440 PF00318 Ribosomal protein S2 C0099_07445 PF00889 Elongation factor TS C0099_07450 PF00696 Amino acid kinase family C0099_07455 PF01765 Ribosome recycling factor C0099_07460 PF01255 Putative undecaprenyl diphosphate synthase C0099_07465 PF01148 Cytidylyltransferase family C0099_07470 PF02670 1-deoxy-D-xylulose 5-phosphate reductoisomerase C0099_07470 PF08436 1-deoxy-D-xylulose 5-phosphate reductoisomerase C-terminal C0099_07470 PF13288 DXP reductoisomerase C-terminal domain C0099_07475 PF02163 Peptidase family M50 C0099_07475 PF13180 PDZ domain C0099_07480 PF01103 Surface antigen C0099_07480 PF07244 Surface antigen variable number repeat C0099_07485 PF03938 Outer membrane protein (OmpH-like) C0099_07490 PF00132 Bacterial transferase hexapeptide (six repeats) C0099_07490 PF04613 UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase, LpxD C0099_07490 PF14602 Hexapeptide repeat of succinyl-transferase C0099_07495 PF07977 FabA-like domain C0099_07500 PF00132 Bacterial transferase hexapeptide (six repeats) C0099_07500 PF13720 Udp N-acetylglucosamine O-acyltransferase; Domain 2 C0099_07505 PF02684 C0099_07505 C0099_07510 PF01351 Ribonuclease HII C0099_07515 PF05425 C0099_07515 C0099_07520 PF00588 SpoU rRNA Methylase family C0099_07525 PF01597 Glycine cleavage H-protein C0099_07530 PF00561 alpha/beta hydrolase fold C0099_07535 PF02811 PHP domain C0099_07540 PF01300 Telomere recombination C0099_07550 PF00579 tRNA synthetases class I (W and Y) C0099_07555 PF02616 ScpA/B protein C0099_07560 PF04079 Putative transcriptional regulators (Ypuh-like) C0099_07565 PF00849 RNA pseudouridylate synthase C0099_07565 PF01479 S4 domain C0099_07570 PF02576 Uncharacterised BCR, YhbC family COG0779 C0099_07570 PF17384 C0099_07570 C0099_07575 PF00575 S1 RNA binding domain C0099_07575 PF08529 NusA N-terminal domain C0099_07575 PF13184 NusA-like KH domain C0099_07575 PF14520 Helix-hairpin-helix domain C0099_07580 PF00009 Elongation factor Tu GTP binding domain C0099_07580 PF04760 Translation initiation factor IF-2, N-terminal region C0099_07580 PF08364 C0099_07580 C0099_07580 PF11987 Translation-initiation factor 2 C0099_07585 PF02033 Ribosome-binding factor A C0099_07590 PF01509 TruB family pseudouridylate synthase (N terminal domain) C0099_07590 PF09157 Pseudouridine synthase II TruB, C-terminal C0099_07590 PF16198 C0099_07590 C0099_07595 PF00312 Ribosomal protein S15 C0099_07600 PF00013 KH domain C0099_07600 PF00575 S1 RNA binding domain C0099_07600 PF01138 3' exoribonuclease family, domain 1 C0099_07600 PF03725 3' exoribonuclease family, domain 2 C0099_07600 PF03726 Polyribonucleotide nucleotidyltransferase, RNA binding domain C0099_07605 PF01610 C0099_07605 C0099_07605 PF13542 C0099_07605 C0099_07610 PF01258 Prokaryotic dksA/traR C4-type zinc finger C0099_07635 PF05065 Phage capsid family C0099_07640 PF12728 Helix-turn-helix domain C0099_07675 PF00589 Phage integrase family C0099_07675 PF13356 Domain of unknown function (DUF4102) C0099_07680 PF06339 C0099_07680 C0099_07685 PF00202 Aminotransferase class-III C0099_07690 PF00583 Acetyltransferase (GNAT) family C0099_07700 PF07690 Major Facilitator Superfamily C0099_07705 PF03486 HI0933-like protein C0099_07710 PF01329 Pterin 4 alpha carbinolamine dehydratase C0099_07715 PF01053 Cys/Met metabolism PLP-dependent enzyme C0099_07720 PF00425 chorismate binding enzyme C0099_07720 PF01063 Aminotransferase class IV C0099_07725 PF02811 PHP domain C0099_07725 PF07733 Bacterial DNA polymerase III alpha subunit C0099_07725 PF14579 Helix-hairpin-helix motif C0099_07730 PF05299 M61 glycyl aminopeptidase C0099_07730 PF13180 PDZ domain C0099_07740 PF00078 Reverse transcriptase (RNA-dependent DNA polymerase) C0099_07740 PF08388 C0099_07740 C0099_07750 PF00817 impB/mucB/samB family C0099_07755 PF03846 Cell division inhibitor SulA C0099_07760 PF00717 Peptidase S24-like C0099_07760 PF01726 LexA DNA binding domain C0099_07765 PF00578 AhpC/TSA family C0099_07770 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase C0099_07775 PF00072 Response regulator receiver domain C0099_07775 PF00990 GGDEF domain C0099_07780 PF00753 Metallo-beta-lactamase superfamily C0099_07780 PF16123 C0099_07780 C0099_07785 PF08241 Methyltransferase domain C0099_07790 PF00075 RNase H C0099_07795 PF00929 Exonuclease C0099_07800 PF01564 Spermine/spermidine synthase C0099_07805 PF00488 MutS domain V C0099_07805 PF01624 MutS domain I C0099_07805 PF05188 MutS domain II C0099_07805 PF05190 MutS family domain IV C0099_07805 PF05192 MutS domain III C0099_07810 PF00459 Inositol monophosphatase family C0099_07815 PF00588 SpoU rRNA Methylase family C0099_07820 PF00132 Bacterial transferase hexapeptide (six repeats) C0099_07825 PF02082 Transcriptional regulator C0099_07830 PF00266 Aminotransferase class-V C0099_07835 PF00266 Aminotransferase class-V C0099_07840 PF01592 NifU-like N terminal domain C0099_07845 PF01521 Iron-sulphur cluster biosynthesis C0099_07850 PF07743 HSCB C-terminal oligomerisation domain C0099_07855 PF00012 Hsp70 protein C0099_07860 PF00111 2Fe-2S iron-sulfur cluster binding domain C0099_07865 PF04384 Iron-sulphur cluster assembly C0099_07870 PF05175 Methyltransferase small domain C0099_07875 PF01546 Peptidase family M20/M25/M40 C0099_07875 PF07687 Peptidase dimerisation domain C0099_07880 PF00437 Type II/IV secretion system protein C0099_07885 PF14602 Hexapeptide repeat of succinyl-transferase C0099_07885 PF14805 Tetrahydrodipicolinate N-succinyltransferase N-terminal C0099_07890 PF00155 Aminotransferase class I and II C0099_07895 PF02463 RecF/RecN/SMC N terminal domain C0099_07900 PF04354 ZipA, C-terminal FtsZ-binding domain C0099_07905 PF00533 BRCA1 C Terminus (BRCT) domain C0099_07905 PF01653 NAD-dependent DNA ligase adenylation domain C0099_07905 PF03119 NAD-dependent DNA ligase C4 zinc finger domain C0099_07905 PF03120 NAD-dependent DNA ligase OB-fold domain C0099_07905 PF12826 Helix-hairpin-helix motif C0099_07905 PF14520 Helix-hairpin-helix domain C0099_07910 PF00483 Nucleotidyl transferase C0099_07915 PF00009 Elongation factor Tu GTP binding domain C0099_07915 PF00679 Elongation factor G C-terminus C0099_07915 PF03144 Elongation factor Tu domain 2 C0099_07920 PF01048 Phosphorylase superfamily C0099_07925 PF10017 C0099_07925 C0099_07930 PF03781 Sulfatase-modifying factor enzyme 1 C0099_07930 PF12867 DinB superfamily C0099_07935 PF05362 Lon protease (S16) C-terminal proteolytic domain C0099_07935 PF13481 AAA domain C0099_07940 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family C0099_07940 PF03466 LysR substrate binding domain C0099_07945 PF03167 Uracil DNA glycosylase superfamily C0099_07950 PF00583 Acetyltransferase (GNAT) family C0099_07955 PF00814 Glycoprotease family C0099_07965 PF00072 Response regulator receiver domain C0099_07965 PF00486 Transcriptional regulatory protein, C terminal C0099_07970 PF00512 His Kinase A (phospho-acceptor) domain C0099_07970 PF00672 HAMP domain C0099_07970 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase C0099_07970 PF16524 C0099_07970 C0099_07975 PF01152 Bacterial-like globin C0099_07980 PF03795 YCII-related domain C0099_07985 PF01722 BolA-like protein C0099_07990 PF13616 PPIC-type PPIASE domain C0099_07995 PF01891 Cobalt uptake substrate-specific transmembrane region C0099_08000 PF00766 Electron transfer flavoprotein FAD-binding domain C0099_08000 PF01012 Electron transfer flavoprotein domain C0099_08005 PF01012 Electron transfer flavoprotein domain C0099_08010 PF01026 TatD related DNase C0099_08015 PF02541 Ppx/GppA phosphatase family C0099_08020 PF02503 Polyphosphate kinase middle domain C0099_08020 PF13089 Polyphosphate kinase N-terminal domain C0099_08020 PF13090 Polyphosphate kinase C-terminal domain C0099_08025 PF02824 TGS domain C0099_08025 PF04607 Region found in RelA / SpoT proteins C0099_08025 PF13291 ACT domain C0099_08025 PF13328 HD domain C0099_08030 PF00892 EamA-like transporter family C0099_08035 PF06167 Glucose-regulated metallo-peptidase M90 C0099_08040 PF10116 C0099_08040 C0099_08045 PF02834 LigT like Phosphoesterase C0099_08050 PF02542 YgbB family C0099_08055 PF01128 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase C0099_08060 PF01875 Memo-like protein C0099_08065 PF01871 AMMECR1 C0099_08070 PF04055 Radical SAM superfamily C0099_08080 PF09601 C0099_08080 C0099_08085 PF00270 DEAD/DEAH box helicase C0099_08085 PF00271 Helicase conserved C-terminal domain C0099_08085 PF02559 CarD-like/TRCF domain C0099_08085 PF03461 TRCF domain C0099_08090 PF00793 DAHP synthetase I family C0099_08095 PF12710 haloacid dehalogenase-like hydrolase C0099_08095 PF13284 C0099_08095 C0099_08100 PF03883 C0099_08100 C0099_08105 PF00202 Aminotransferase class-III C0099_08110 PF00155 Aminotransferase class I and II C0099_08115 PF12697 Alpha/beta hydrolase family C0099_08120 PF08241 Methyltransferase domain C0099_08125 PF13500 AAA domain C0099_08130 PF00939 Sodium:sulfate symporter transmembrane region C0099_08135 PF01124 MAPEG family C0099_08140 PF15887 C0099_08140 C0099_08145 PF00990 GGDEF domain C0099_08145 PF08447 PAS fold C0099_08150 PF01850 PIN domain C0099_08155 PF04014 Antidote-toxin recognition MazE C0099_08160 PF07883 Cupin domain C0099_08170 PF01381 Helix-turn-helix C0099_08175 PF05973 C0099_08175 C0099_08180 PF00005 ABC transporter C0099_08180 PF00664 ABC transporter transmembrane region C0099_08185 PF13437 HlyD family secretion protein C0099_08190 PF13641 Glycosyltransferase like family 2 C0099_08200 PF00208 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase C0099_08200 PF02812 Glu/Leu/Phe/Val dehydrogenase, dimerisation domain C0099_08205 PF00005 ABC transporter C0099_08205 PF12848 ABC transporter C0099_08210 PF10387 Protein of unknown function (DUF2442) C0099_08215 PF01370 NAD dependent epimerase/dehydratase family C0099_08215 PF02222 ATP-grasp domain C0099_08220 PF13616 PPIC-type PPIASE domain C0099_08225 PF03960 ArsC family C0099_08230 PF13472 GDSL-like Lipase/Acylhydrolase family C0099_08235 PF01226 Formate/nitrite transporter C0099_08240 PF00571 CBS domain C0099_08240 PF07228 Stage II sporulation protein E (SpoIIE) C0099_08250 PF09345 C0099_08250 C0099_08255 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain C0099_08255 PF07992 Pyridine nucleotide-disulphide oxidoreductase C0099_08260 PF03168 Late embryogenesis abundant protein C0099_08265 PF13847 Methyltransferase domain C0099_08270 PF13520 Amino acid permease C0099_08275 PF00085 Thioredoxin C0099_08280 PF07995 Glucose / Sorbosone dehydrogenase C0099_08285 PF04892 C0099_08285 C0099_08295 PF00691 OmpA family C0099_08300 PF07311 Dodecin C0099_08305 PF00528 Binding-protein-dependent transport system inner membrane component C0099_08310 PF00005 ABC transporter C0099_08310 PF08402 TOBE domain C0099_08315 PF03588 Leucyl/phenylalanyl-tRNA protein transferase C0099_08320 PF04376 C0099_08320 C0099_08320 PF04377 C0099_08320 C0099_08325 PF01180 Dihydroorotate dehydrogenase C0099_08330 PF02508 C0099_08330 C0099_08335 PF04060 Putative Fe-S cluster C0099_08335 PF14697 4Fe-4S dicluster domain C0099_08340 PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit C0099_08340 PF10531 SLBB domain C0099_08340 PF12838 4Fe-4S dicluster domain C0099_08340 PF13375 RnfC Barrel sandwich hybrid domain C0099_08345 PF03116 C0099_08345 C0099_08350 PF04205 FMN-binding domain C0099_08355 PF02508 C0099_08355 C0099_08360 PF00633 Helix-hairpin-helix motif C0099_08360 PF00730 HhH-GPD superfamily base excision DNA repair protein C0099_08360 PF10576 Iron-sulfur binding domain of endonuclease III C0099_08365 PF04011 LemA family C0099_08370 PF01435 Peptidase family M48 C0099_08375 PF00034 Cytochrome c C0099_08385 PF08668 HDOD domain C0099_08390 PF01047 MarR family C0099_08395 PF00654 Voltage gated chloride channel C0099_08400 PF00183 Hsp90 protein C0099_08400 PF13589 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase C0099_08405 PF01272 Transcription elongation factor, GreA/GreB, C-term C0099_08405 PF03449 Transcription elongation factor, N-terminal C0099_08410 PF12091 C0099_08410 C0099_08415 PF04325 Protein of unknown function (DUF465) C0099_08420 PF09955 C0099_08420 C0099_08425 PF03372 Endonuclease/Exonuclease/phosphatase family C0099_08430 PF01545 Cation efflux family C0099_08435 PF02867 Ribonucleotide reductase, barrel domain C0099_08440 PF06114 Domain of unknown function (DUF955) C0099_08445 PF02743 Cache domain C0099_08450 PF00990 GGDEF domain C0099_08450 PF09084 NMT1/THI5 like C0099_08455 PF07859 alpha/beta hydrolase fold C0099_08460 PF13561 Enoyl-(Acyl carrier protein) reductase C0099_08465 PF00456 Transketolase, thiamine diphosphate binding domain C0099_08470 PF01037 AsnC family C0099_08470 PF13412 Winged helix-turn-helix DNA-binding C0099_08480 PF00520 Ion transport protein C0099_08485 PF02080 TrkA-C domain C0099_08485 PF03600 Citrate transporter C0099_08490 PF03976 Polyphosphate kinase 2 (PPK2) C0099_08495 PF04102 SlyX C0099_08515 PF05957 C0099_08515 C0099_08520 PF00072 Response regulator receiver domain C0099_08520 PF00497 Bacterial extracellular solute-binding proteins, family 3 C0099_08520 PF00512 His Kinase A (phospho-acceptor) domain C0099_08520 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase C0099_08525 PF00072 Response regulator receiver domain C0099_08525 PF00563 EAL domain C0099_08525 PF00990 GGDEF domain C0099_08530 PF00990 GGDEF domain C0099_08540 PF02666 C0099_08540 C0099_08550 PF00589 Phage integrase family C0099_08570 PF12802 MarR family C0099_08570 PF13481 AAA domain C0099_08575 PF12728 Helix-turn-helix domain C0099_08580 PF05065 Phage capsid family C0099_08595 PF02036 SCP-2 sterol transfer family C0099_08600 PF01136 C0099_08600 C0099_08605 PF01136 C0099_08605 C0099_08610 PF00072 Response regulator receiver domain C0099_08610 PF00196 Bacterial regulatory proteins, luxR family C0099_08615 PF00672 HAMP domain C0099_08615 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase C0099_08615 PF07730 Histidine kinase C0099_08615 PF13185 GAF domain C0099_08615 PF13675 Type IV pili methyl-accepting chemotaxis transducer N-term C0099_08620 PF00639 PPIC-type PPIASE domain C0099_08625 PF02665 Nitrate reductase gamma subunit C0099_08630 PF02613 Nitrate reductase delta subunit C0099_08635 PF13247 4Fe-4S dicluster domain C0099_08635 PF14711 Respiratory nitrate reductase beta C-terminal C0099_08640 PF00384 Molybdopterin oxidoreductase C0099_08640 PF01568 Molydopterin dinucleotide binding domain C0099_08640 PF14710 Respiratory nitrate reductase alpha N-terminal C0099_08645 PF07690 Major Facilitator Superfamily C0099_08650 PF07690 Major Facilitator Superfamily C0099_08660 PF04893 C0099_08660 C0099_08665 PF07690 Major Facilitator Superfamily C0099_08675 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain C0099_08675 PF08376 Nitrate and nitrite sensing C0099_08680 PF00072 Response regulator receiver domain C0099_08680 PF00512 His Kinase A (phospho-acceptor) domain C0099_08680 PF00989 PAS fold C0099_08680 PF01627 Hpt domain C0099_08680 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase C0099_08680 PF03924 CHASE domain C0099_08680 PF05231 C0099_08680 C0099_08685 PF00072 Response regulator receiver domain C0099_08685 PF00563 EAL domain C0099_08690 PF05573 NosL C0099_08695 PF12679 C0099_08695 C0099_08700 PF00005 ABC transporter C0099_08705 PF05048 Periplasmic copper-binding protein (NosD) C0099_08710 PF00116 Cytochrome C oxidase subunit II, periplasmic domain C0099_08715 PF04205 FMN-binding domain C0099_08715 PF12801 C0099_08715 C0099_08720 PF12802 MarR family C0099_08725 PF06930 C0099_08725 C0099_08730 PF01814 Hemerythrin HHE cation binding domain C0099_08735 PF05940 C0099_08735 C0099_08740 PF10006 C0099_08740 C0099_08745 PF01814 Hemerythrin HHE cation binding domain C0099_08750 PF01814 Hemerythrin HHE cation binding domain C0099_08755 PF04247 C0099_08755 C0099_08760 PF00027 Cyclic nucleotide-binding domain C0099_08760 PF13545 Crp-like helix-turn-helix domain C0099_08765 PF07143 Hydroxyneurosporene synthase (CrtC) C0099_08765 PF17186 C0099_08765 C0099_08770 PF02687 C0099_08770 C0099_08770 PF12704 MacB-like periplasmic core domain C0099_08775 PF00005 ABC transporter C0099_08780 PF00494 Squalene/phytoene synthase C0099_08785 PF00494 Squalene/phytoene synthase C0099_08790 PF01593 Flavin containing amine oxidoreductase C0099_08795 PF02566 OsmC-like protein C0099_08800 PF02082 Transcriptional regulator C0099_08805 PF00034 Cytochrome c C0099_08810 PF00115 Cytochrome C and Quinol oxidase polypeptide I C0099_08815 PF07728 AAA domain (dynein-related subfamily) C0099_08815 PF08406 C0099_08815 C0099_08825 PF12680 SnoaL-like domain C0099_08835 PF09720 C0099_08835 C0099_08840 PF00005 ABC transporter C0099_08845 PF13472 GDSL-like Lipase/Acylhydrolase family C0099_08850 PF01850 PIN domain C0099_08855 PF04014 Antidote-toxin recognition MazE C0099_08860 PF00581 Rhodanese-like domain C0099_08865 PF13489 Methyltransferase domain C0099_08870 PF00171 Aldehyde dehydrogenase family C0099_08875 PF13302 Acetyltransferase (GNAT) domain C0099_08875 PF13380 CoA binding domain C0099_08875 PF13549 ATP-grasp domain C0099_08875 PF13607 Succinyl-CoA ligase like flavodoxin domain C0099_08880 PF01263 Aldose 1-epimerase C0099_08885 PF00575 S1 RNA binding domain C0099_08885 PF09371 Tex-like protein N-terminal domain C0099_08885 PF12836 Helix-hairpin-helix motif C0099_08885 PF16921 C0099_08885 C0099_08890 PF03960 ArsC family C0099_08895 PF01430 Hsp33 protein C0099_08900 PF03775 Septum formation inhibitor MinC, C-terminal domain C0099_08900 PF05209 Septum formation inhibitor MinC, N-terminal domain C0099_08905 PF13614 AAA domain C0099_08910 PF03776 Septum formation topological specificity factor MinE C0099_08915 PF00152 tRNA synthetases class II (D, K and N) C0099_08915 PF01336 OB-fold nucleic acid binding domain C0099_08920 PF01266 FAD dependent oxidoreductase C0099_08920 PF05430 S-adenosyl-L-methionine-dependent methyltransferase C0099_08925 PF00749 tRNA synthetases class I (E and Q), catalytic domain C0099_08935 PF08212 Lipocalin-like domain C0099_08940 PF14070 C0099_08940 C0099_08945 PF00202 Aminotransferase class-III C0099_08955 PF00216 Bacterial DNA-binding protein C0099_08960 PF00004 ATPase family associated with various cellular activities (AAA) C0099_08960 PF02190 ATP-dependent protease La (LON) domain C0099_08960 PF05362 Lon protease (S16) C-terminal proteolytic domain C0099_08965 PF06689 ClpX C4-type zinc finger C0099_08965 PF07724 AAA domain (Cdc48 subfamily) C0099_08965 PF10431 C-terminal, D2-small domain, of ClpB protein C0099_08970 PF00574 Clp protease C0099_08975 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase C0099_08975 PF05697 Bacterial trigger factor protein (TF) C0099_08975 PF05698 Bacterial trigger factor protein (TF) C-terminus C0099_08980 PF06798 C0099_08980 C0099_08980 PF08298 PrkA AAA domain C0099_08985 PF04285 C0099_08985 C0099_08990 PF04293 C0099_08990 C0099_08995 PF01256 Carbohydrate kinase C0099_08995 PF03853 YjeF-related protein N-terminus C0099_09000 PF01729 Quinolinate phosphoribosyl transferase, C-terminal domain C0099_09000 PF02749 Quinolinate phosphoribosyl transferase, N-terminal domain C0099_09005 PF00291 Pyridoxal-phosphate dependent enzyme C0099_09005 PF14821 Threonine synthase N terminus C0099_09010 PF11279 C0099_09010 C0099_09015 PF00999 Sodium/hydrogen exchanger family C0099_09020 PF00742 Homoserine dehydrogenase C0099_09020 PF01842 ACT domain C0099_09020 PF03447 Homoserine dehydrogenase, NAD binding domain C0099_09025 PF00155 Aminotransferase class I and II C0099_09030 PF02673 C0099_09030 C0099_09035 PF00578 AhpC/TSA family C0099_09040 PF02562 PhoH-like protein C0099_09040 PF13638 PIN domain C0099_09045 PF00027 Cyclic nucleotide-binding domain C0099_09045 PF00571 CBS domain C0099_09045 PF03445 C0099_09045 C0099_09045 PF10335 C0099_09045 C0099_09055 PF10087 C0099_09055 C0099_09060 PF13343 Bacterial extracellular solute-binding protein C0099_09065 PF01926 50S ribosome-binding GTPase C0099_09070 PF07209 C0099_09070 C0099_09075 PF13679 C0099_09075 C0099_09080 PF06080 C0099_09080 C0099_09085 PF00571 CBS domain C0099_09085 PF01595 C0099_09085 C0099_09085 PF03471 Transporter associated domain C0099_09090 PF07152 YaeQ protein C0099_09100 PF01636 Phosphotransferase enzyme family C0099_09105 PF01227 GTP cyclohydrolase I C0099_09110 PF11743 C0099_09110 C0099_09115 PF01384 C0099_09115 C0099_09120 PF12643 C0099_09120 C0099_09125 PF04378 Ribosomal RNA small subunit methyltransferase D, RsmJ C0099_09130 PF00132 Bacterial transferase hexapeptide (six repeats) C0099_09135 PF04402 Protein of unknown function (DUF541) C0099_09145 PF02580 D-Tyr-tRNA(Tyr) deacylase C0099_09150 PF04977 Septum formation initiator C0099_09155 PF00113 Enolase, C-terminal TIM barrel domain C0099_09155 PF03952 Enolase, N-terminal domain C0099_09160 PF00793 DAHP synthetase I family C0099_09165 PF00117 Glutamine amidotransferase class-I C0099_09165 PF06418 CTP synthase N-terminus C0099_09175 PF00857 Isochorismatase family C0099_09180 PF00501 AMP-binding enzyme C0099_09180 PF13193 AMP-binding enzyme C-terminal domain C0099_09180 PF16177 C0099_09180 C0099_09185 PF05187 Electron transfer flavoprotein-ubiquinone oxidoreductase C0099_09185 PF13450 NAD(P)-binding Rossmann-like domain C0099_09190 PF04314 Protein of unknown function (DUF461) C0099_09195 PF11162 C0099_09195 C0099_09200 PF07043 C0099_09200 C0099_09210 PF02769 AIR synthase related protein, C-terminal domain C0099_09210 PF13507 CobB/CobQ-like glutamine amidotransferase domain C0099_09215 PF04519 C0099_09215 C0099_09225 PF01551 Peptidase family M23 C0099_09230 PF00391 PEP-utilising enzyme, mobile domain C0099_09230 PF01326 Pyruvate phosphate dikinase, PEP/pyruvate binding domain C0099_09230 PF02896 PEP-utilising enzyme, TIM barrel domain C0099_09235 PF03618 C0099_09235 C0099_09240 PF11062 C0099_09240 C0099_09245 PF01641 SelR domain C0099_09250 PF00753 Metallo-beta-lactamase superfamily C0099_09250 PF03772 C0099_09250 C0099_09250 PF13567 C0099_09250 C0099_09255 PF09835 C0099_09255 C0099_09260 PF00005 ABC transporter C0099_09265 PF02687 C0099_09265 C0099_09265 PF12704 MacB-like periplasmic core domain C0099_09270 PF01368 DHH family C0099_09270 PF02272 DHHA1 domain C0099_09275 PF03922 OmpW family C0099_09280 PF00472 RF-1 domain C0099_09280 PF03462 PCRF domain C0099_09285 PF00034 Cytochrome c C0099_09290 PF00115 Cytochrome C and Quinol oxidase polypeptide I C0099_09295 PF00510 Cytochrome c oxidase subunit III C0099_09300 PF03626 C0099_09300 C0099_09305 PF07728 AAA domain (dynein-related subfamily) C0099_09305 PF08406 C0099_09305 C0099_09315 PF12801 C0099_09315 C0099_09320 PF00092 von Willebrand factor type A domain C0099_09325 PF00270 DEAD/DEAH box helicase C0099_09325 PF00271 Helicase conserved C-terminal domain C0099_09330 PF00990 GGDEF domain C0099_09340 PF13307 Helicase C-terminal domain C0099_09355 PF05973 C0099_09355 C0099_09360 PF03969 AFG1-like ATPase C0099_09365 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain C0099_09365 PF07992 Pyridine nucleotide-disulphide oxidoreductase C0099_09370 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) C0099_09370 PF00364 Biotin-requiring enzyme C0099_09370 PF02817 e3 binding domain C0099_09375 PF00676 Dehydrogenase E1 component C0099_09375 PF02779 Transketolase, pyrimidine binding domain C0099_09375 PF16078 C0099_09375 C0099_09375 PF16870 C0099_09375 C0099_09380 PF00285 Citrate synthase C0099_09385 PF03937 Flavinator of succinate dehydrogenase C0099_09390 PF13085 2Fe-2S iron-sulfur cluster binding domain C0099_09390 PF13534 4Fe-4S dicluster domain C0099_09395 PF00890 FAD binding domain C0099_09395 PF02910 Fumarate reductase flavoprotein C-term C0099_09400 PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit C0099_09405 PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit C0099_09410 PF00392 Bacterial regulatory proteins, gntR family C0099_09410 PF07702 UTRA domain C0099_09415 PF00056 lactate/malate dehydrogenase, NAD binding domain C0099_09415 PF02866 lactate/malate dehydrogenase, alpha/beta C-terminal domain C0099_09420 PF03328 HpcH/HpaI aldolase/citrate lyase family C0099_09425 PF00211 Adenylate and Guanylate cyclase catalytic domain C0099_09425 PF00498 FHA domain C0099_09430 PF00330 Aconitase family (aconitate hydratase) C0099_09430 PF06434 Aconitate hydratase 2 N-terminus C0099_09430 PF11791 Aconitate B N-terminal domain C0099_09435 PF00830 Ribosomal L28 family C0099_09440 PF00471 Ribosomal protein L33 C0099_09445 PF00313 'Cold-shock' DNA-binding domain C0099_09450 PF02617 ATP-dependent Clp protease adaptor protein ClpS C0099_09455 PF00004 ATPase family associated with various cellular activities (AAA) C0099_09455 PF02861 Clp amino terminal domain C0099_09455 PF07724 AAA domain (Cdc48 subfamily) C0099_09455 PF10431 C-terminal, D2-small domain, of ClpB protein C0099_09460 PF00501 AMP-binding enzyme C0099_09460 PF13193 AMP-binding enzyme C-terminal domain C0099_09460 PF16177 C0099_09460 C0099_09465 PF00072 Response regulator receiver domain C0099_09465 PF00990 GGDEF domain C0099_09470 PF00107 Zinc-binding dehydrogenase C0099_09470 PF08240 Alcohol dehydrogenase GroES-like domain C0099_09475 PF08668 HDOD domain C0099_09480 PF00005 ABC transporter C0099_09480 PF12848 ABC transporter C0099_09480 PF16326 C0099_09480 C0099_09520 PF01565 FAD binding domain C0099_09520 PF02913 FAD linked oxidases, C-terminal domain C0099_09525 PF01734 Patatin-like phospholipase C0099_09530 PF00919 Uncharacterized protein family UPF0004 C0099_09530 PF04055 Radical SAM superfamily C0099_09535 PF05233 C0099_09535 C0099_09535 PF07879 C0099_09535 C0099_09540 PF13561 Enoyl-(Acyl carrier protein) reductase C0099_09545 PF00106 short chain dehydrogenase C0099_09550 PF07167 C0099_09550 C0099_09560 PF02578 Multi-copper polyphenol oxidoreductase laccase C0099_09565 PF00849 RNA pseudouridylate synthase C0099_09565 PF01479 S4 domain C0099_09570 PF13525 Outer membrane lipoprotein C0099_09575 PF01594 C0099_09575 C0099_09580 PF00171 Aldehyde dehydrogenase family C0099_09585 PF00107 Zinc-binding dehydrogenase C0099_09585 PF08240 Alcohol dehydrogenase GroES-like domain C0099_09590 PF00756 Putative esterase C0099_09595 PF00563 EAL domain C0099_09595 PF00672 HAMP domain C0099_09595 PF00990 GGDEF domain C0099_09595 PF08376 Nitrate and nitrite sensing C0099_09595 PF13426 PAS domain C0099_09600 PF03458 C0099_09600 C0099_09600 PF09084 NMT1/THI5 like C0099_09605 PF09084 NMT1/THI5 like C0099_09615 PF00696 Amino acid kinase family C0099_09615 PF01842 ACT domain C0099_09615 PF13840 ACT domain C0099_09620 PF01381 Helix-turn-helix C0099_09625 PF01242 6-pyruvoyl tetrahydropterin synthase C0099_09630 PF00487 C0099_09630 C0099_09630 PF01610 C0099_09630 C0099_09635 PF13091 PLD-like domain C0099_09640 PF01189 NOL1/NOP2/sun family C0099_09645 PF11306 Protein of unknown function (DUF3108) C0099_09650 PF00551 Formyl transferase C0099_09660 PF01119 DNA mismatch repair protein, C-terminal domain C0099_09660 PF08676 MutL C terminal dimerisation domain C0099_09660 PF13589 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase C0099_09670 PF06808 C0099_09670 C0099_09675 PF04290 C0099_09675 C0099_09680 PF03480 Bacterial extracellular solute-binding protein, family 7 C0099_09685 PF00149 Calcineurin-like phosphoesterase C0099_09690 PF00571 CBS domain C0099_09690 PF04972 BON domain C0099_09695 PF01844 HNH endonuclease C0099_09700 PF15919 C0099_09700 C0099_09705 PF01037 AsnC family C0099_09705 PF13412 Winged helix-turn-helix DNA-binding C0099_09715 PF00682 HMGL-like C0099_09715 PF08502 LeuA allosteric (dimerisation) domain C0099_09720 PF00512 His Kinase A (phospho-acceptor) domain C0099_09720 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase C0099_09720 PF08521 C0099_09720 C0099_09725 PF00072 Response regulator receiver domain C0099_09725 PF00486 Transcriptional regulatory protein, C terminal C0099_09730 PF14559 Tetratricopeptide repeat C0099_09735 PF00106 short chain dehydrogenase C0099_09740 PF14518 Iron-containing redox enzyme C0099_09745 PF00501 AMP-binding enzyme C0099_09750 PF12261 C0099_09750 C0099_09755 PF04542 Sigma-70 region 2 C0099_09755 PF08281 Sigma-70, region 4 C0099_09760 PF03795 YCII-related domain C0099_09765 PF12843 C0099_09765 C0099_09770 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family C0099_09770 PF03466 LysR substrate binding domain C0099_09775 PF07681 C0099_09775 C0099_09780 PF02900 Catalytic LigB subunit of aromatic ring-opening dioxygenase C0099_09790 PF07992 Pyridine nucleotide-disulphide oxidoreductase C0099_09795 PF00384 Molybdopterin oxidoreductase C0099_09795 PF01568 Molydopterin dinucleotide binding domain C0099_09800 PF00355 Rieske [2Fe-2S] domain C0099_09805 PF12974 ABC transporter, phosphonate, periplasmic substrate-binding protein C0099_09810 PF00512 His Kinase A (phospho-acceptor) domain C0099_09810 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase C0099_09815 PF00072 Response regulator receiver domain C0099_09815 PF00158 Sigma-54 interaction domain C0099_09815 PF02954 Bacterial regulatory protein, Fis family C0099_09825 PF00330 Aconitase family (aconitate hydratase) C0099_09825 PF00694 Aconitase C-terminal domain C0099_09830 PF00296 Luciferase-like monooxygenase C0099_09840 PF02635 DsrE/DsrF-like family C0099_09845 PF00205 Thiamine pyrophosphate enzyme, central domain C0099_09845 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain C0099_09845 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain C0099_09850 PF16868 C0099_09850 C0099_09855 PF06808 C0099_09855 C0099_09860 PF01977 3-octaprenyl-4-hydroxybenzoate carboxy-lyase C0099_09865 PF00171 Aldehyde dehydrogenase family C0099_09870 PF02625 XdhC and CoxI family C0099_09870 PF13478 XdhC Rossmann domain C0099_09875 PF00378 Enoyl-CoA hydratase/isomerase family C0099_09880 PF00501 AMP-binding enzyme C0099_09880 PF13193 AMP-binding enzyme C-terminal domain C0099_09885 PF00111 2Fe-2S iron-sulfur cluster binding domain C0099_09885 PF01799 [2Fe-2S] binding domain C0099_09890 PF00941 FAD binding domain in molybdopterin dehydrogenase C0099_09890 PF03450 CO dehydrogenase flavoprotein C-terminal domain C0099_09895 PF01315 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain C0099_09895 PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase C0099_09895 PF06240 Carbon monoxide dehydrogenase subunit G (CoxG) C0099_09900 PF02311 AraC-like ligand binding domain C0099_09900 PF12833 Helix-turn-helix domain C0099_09905 PF12804 MobA-like NTP transferase domain C0099_09910 PF02441 Flavoprotein C0099_09915 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family C0099_09915 PF03466 LysR substrate binding domain C0099_09920 PF11172 C0099_09920 C0099_09925 PF01163 RIO1 family C0099_09930 PF09905 Uncharacterized conserved protein (DUF2132) C0099_09935 PF15937 C0099_09935 C0099_09940 PF11663 C0099_09940 C0099_09945 PF05973 C0099_09945 C0099_09950 PF13744 Helix-turn-helix domain C0099_09955 PF13391 C0099_09955 C0099_09960 PF01230 HIT domain C0099_09970 PF01144 Coenzyme A transferase C0099_09975 PF00005 ABC transporter C0099_09980 PF00005 ABC transporter C0099_09980 PF00664 ABC transporter transmembrane region C0099_09985 PF02322 C0099_09985 C0099_09990 PF01654 C0099_09990 C0099_10000 PF13511 C0099_10000 C0099_10005 PF07386 C0099_10005 C0099_10010 PF04116 C0099_10010 C0099_10015 PF07690 Major Facilitator Superfamily C0099_10020 PF00581 Rhodanese-like domain C0099_10020 PF01022 Bacterial regulatory protein, arsR family C0099_10025 PF07690 Major Facilitator Superfamily C0099_10030 PF11295 C0099_10030 C0099_10035 PF13480 Acetyltransferase (GNAT) domain C0099_10040 PF13432 Tetratricopeptide repeat C0099_10040 PF13844 Glycosyl transferase family 41 C0099_10040 PF14559 Tetratricopeptide repeat C0099_10055 PF00809 Pterin binding enzyme C0099_10060 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I C0099_10070 PF04986 C0099_10070 C0099_10070 PF14319 C0099_10070 C0099_10080 PF00239 Resolvase, N terminal domain C0099_10080 PF02796 Helix-turn-helix domain of resolvase C0099_10085 PF12840 Helix-turn-helix domain C0099_10090 PF03358 NADPH-dependent FMN reductase C0099_10095 PF01451 Low molecular weight phosphotyrosine protein phosphatase C0099_10100 PF01758 Sodium Bile acid symporter family C0099_10110 PF12703 C0099_10110 C0099_10120 PF04610 C0099_10120 C0099_10140 PF06504 C0099_10140 C0099_10145 PF13481 AAA domain C0099_10150 PF05930 Prophage CP4-57 regulatory protein (AlpA) C0099_10155 PF00589 Phage integrase family C0099_10155 PF13356 Domain of unknown function (DUF4102) C0099_10160 PF00117 Glutamine amidotransferase class-I C0099_10160 PF00958 GMP synthase C terminal domain C0099_10160 PF02540 NAD synthase C0099_10165 PF00478 IMP dehydrogenase / GMP reductase domain C0099_10165 PF00571 CBS domain C0099_10170 PF13511 C0099_10170 C0099_10175 PF03658 RnfH family Ubiquitin C0099_10180 PF03364 Polyketide cyclase / dehydrase and lipid transport C0099_10185 PF01668 SmpB protein C0099_10190 PF07298 C0099_10190 C0099_10195 PF02696 C0099_10195 C0099_10200 PF13561 Enoyl-(Acyl carrier protein) reductase C0099_10205 PF13616 PPIC-type PPIASE domain C0099_10205 PF13624 SurA N-terminal domain C0099_10210 PF00563 EAL domain C0099_10210 PF00990 GGDEF domain C0099_10210 PF03924 CHASE domain C0099_10210 PF05231 C0099_10210 C0099_10215 PF00004 ATPase family associated with various cellular activities (AAA) C0099_10215 PF02861 Clp amino terminal domain C0099_10215 PF07724 AAA domain (Cdc48 subfamily) C0099_10215 PF10431 C-terminal, D2-small domain, of ClpB protein C0099_10220 PF01925 C0099_10220 C0099_10225 PF02391 MoaE protein C0099_10230 PF02597 ThiS family C0099_10235 PF00994 Probable molybdopterin binding domain C0099_10235 PF03453 MoeA N-terminal region (domain I and II) C0099_10235 PF03454 MoeA C-terminal region (domain IV) C0099_10240 PF03205 Molybdopterin guanine dinucleotide synthesis protein B C0099_10245 PF13302 Acetyltransferase (GNAT) domain C0099_10250 PF03631 C0099_10250 C0099_10255 PF00117 Glutamine amidotransferase class-I C0099_10260 PF07883 Cupin domain C0099_10265 PF00080 Copper/zinc superoxide dismutase (SODC) C0099_10270 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family C0099_10270 PF03466 LysR substrate binding domain C0099_10275 PF00561 alpha/beta hydrolase fold C0099_10280 PF00180 Isocitrate/isopropylmalate dehydrogenase C0099_10285 PF12570 C0099_10285 C0099_10290 PF03480 Bacterial extracellular solute-binding protein, family 7 C0099_10295 PF00270 DEAD/DEAH box helicase C0099_10295 PF00271 Helicase conserved C-terminal domain C0099_10295 PF03880 DbpA RNA binding domain C0099_10305 PF06676 C0099_10305 C0099_10315 PF02604 Antitoxin Phd_YefM, type II toxin-antitoxin system C0099_10330 PF05114 Protein of unknown function (DUF692) C0099_10335 PF09836 Uncharacterized protein conserved in bacteria (DUF2063) C0099_10345 PF01663 Type I phosphodiesterase / nucleotide pyrophosphatase C0099_10350 PF00474 Sodium:solute symporter family C0099_10370 PF02417 C0099_10370 C0099_10375 PF02417 C0099_10375 C0099_10385 PF01361 Tautomerase enzyme C0099_10395 PF11227 C0099_10395 C0099_10405 PF05618 Putative ATP-dependant zinc protease C0099_10410 PF14400 C0099_10410 C0099_10410 PF14402 C0099_10410 C0099_10415 PF14397 C0099_10415 C0099_10420 PF04940 Sensors of blue-light using FAD C0099_10425 PF03547 C0099_10425 C0099_10430 PF00005 ABC transporter C0099_10430 PF08352 Oligopeptide/dipeptide transporter, C-terminal region C0099_10435 PF00528 Binding-protein-dependent transport system inner membrane component C0099_10440 PF00528 Binding-protein-dependent transport system inner membrane component C0099_10445 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle C0099_10450 PF01471 Putative peptidoglycan binding domain C0099_10450 PF13406 Transglycosylase SLT domain C0099_10455 PF13645 C0099_10455 C0099_10460 PF01471 Putative peptidoglycan binding domain C0099_10460 PF03734 L,D-transpeptidase catalytic domain C0099_10465 PF13692 Glycosyl transferases group 1 C0099_10470 PF01522 Polysaccharide deacetylase C0099_10480 PF02585 GlcNAc-PI de-N-acetylase C0099_10490 PF00990 GGDEF domain C0099_10495 PF09345 C0099_10495 C0099_10505 PF00672 HAMP domain C0099_10505 PF07228 Stage II sporulation protein E (SpoIIE) C0099_10515 PF00571 CBS domain C0099_10515 PF04972 BON domain C0099_10520 PF13476 AAA domain C0099_10520 PF13558 Putative exonuclease SbcCD, C subunit C0099_10525 PF00149 Calcineurin-like phosphoesterase C0099_10525 PF12320 Type 5 capsule protein repressor C-terminal domain C0099_10530 PF00255 Glutathione peroxidase C0099_10535 PF01925 C0099_10535 C0099_10540 PF01391 Collagen triple helix repeat (20 copies) C0099_10550 PF00535 Glycosyl transferase family 2 C0099_10555 PF03458 C0099_10555 C0099_10560 PF00990 GGDEF domain C0099_10560 PF13188 PAS domain C0099_10570 PF00665 Integrase core domain C0099_10575 PF01695 IstB-like ATP binding protein C0099_10585 PF00990 GGDEF domain C0099_10590 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain C0099_10590 PF00672 HAMP domain C0099_10590 PF08447 PAS fold C0099_10595 PF00563 EAL domain C0099_10595 PF00989 PAS fold C0099_10595 PF00990 GGDEF domain C0099_10595 PF01590 GAF domain C0099_10595 PF08447 PAS fold C0099_10595 PF08448 PAS fold C0099_10595 PF13426 PAS domain C0099_10615 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) C0099_10615 PF02403 Seryl-tRNA synthetase N-terminal domain C0099_10620 PF00004 ATPase family associated with various cellular activities (AAA) C0099_10620 PF12002 MgsA AAA+ ATPase C terminal C0099_10620 PF16193 C0099_10620 C0099_10625 PF03548 Outer membrane lipoprotein carrier protein LolA C0099_10630 PF01580 FtsK/SpoIIIE family C0099_10630 PF09397 Ftsk gamma domain C0099_10630 PF13491 C0099_10630 C0099_10635 PF03030 Inorganic H+ pyrophosphatase C0099_10640 PF00719 Inorganic pyrophosphatase C0099_10645 PF00027 Cyclic nucleotide-binding domain C0099_10645 PF13545 Crp-like helix-turn-helix domain C0099_10650 PF07992 Pyridine nucleotide-disulphide oxidoreductase C0099_10655 PF01713 Smr domain C0099_10660 PF00543 Nitrogen regulatory protein P-II C0099_10665 PF00795 Carbon-nitrogen hydrolase C0099_10665 PF02540 NAD synthase C0099_10675 PF04339 C0099_10675 C0099_10680 PF00403 Heavy-metal-associated domain C0099_10685 PF13386 C0099_10685 C0099_10690 PF04055 Radical SAM superfamily C0099_10690 PF06969 HemN C-terminal domain C0099_10695 PF00027 Cyclic nucleotide-binding domain C0099_10695 PF13545 Crp-like helix-turn-helix domain C0099_10700 PF00753 Metallo-beta-lactamase superfamily C0099_10700 PF07521 RNA-metabolising metallo-beta-lactamase C0099_10700 PF10996 Beta-Casp domain C0099_10705 PF00582 Universal stress protein family C0099_10715 PF05751 C0099_10715 C0099_10720 PF11614 IG-like fold at C-terminal of FixG, putative oxidoreductase C0099_10720 PF12801 C0099_10720 C0099_10720 PF13746 4Fe-4S dicluster domain C0099_10725 PF13442 Cytochrome C oxidase, cbb3-type, subunit III C0099_10725 PF14715 N-terminal domain of cytochrome oxidase-cbb3, FixP C0099_10730 PF05545 C0099_10730 C0099_10735 PF02433 Cytochrome C oxidase, mono-heme subunit/FixO C0099_10740 PF00115 Cytochrome C and Quinol oxidase polypeptide I C0099_10745 PF03597 C0099_10745 C0099_10750 PF00122 E1-E2 ATPase C0099_10750 PF00403 Heavy-metal-associated domain C0099_10750 PF00702 haloacid dehalogenase-like hydrolase C0099_10750 PF12156 C0099_10750 C0099_10755 PF00392 Bacterial regulatory proteins, gntR family C0099_10755 PF07729 FCD domain C0099_10760 PF03480 Bacterial extracellular solute-binding protein, family 7 C0099_10765 PF04290 C0099_10765 C0099_10770 PF06808 C0099_10770 C0099_10775 PF16957 C0099_10775 C0099_10780 PF06857 C0099_10780 C0099_10785 PF01039 Carboxyl transferase domain C0099_10790 PF06833 Malonate decarboxylase gamma subunit (MdcE) C0099_10795 PF10620 C0099_10795 C0099_10800 PF01874 ATP:dephospho-CoA triphosphoribosyl transferase C0099_10805 PF00698 Acyl transferase domain C0099_10810 PF00107 Zinc-binding dehydrogenase C0099_10810 PF08240 Alcohol dehydrogenase GroES-like domain C0099_10815 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain C0099_10815 PF17200 C0099_10815 C0099_10830 PF02604 Antitoxin Phd_YefM, type II toxin-antitoxin system C0099_10835 PF14403 C0099_10835 C0099_10845 PF04168 C0099_10845 C0099_10855 PF01841 Transglutaminase-like superfamily C0099_10855 PF08379 C0099_10855 C0099_10860 PF13649 Methyltransferase domain C0099_10865 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain C0099_10875 PF01936 NYN domain C0099_10875 PF12872 OST-HTH/LOTUS domain C0099_10880 PF07045 Protein of unknown function (DUF1330) C0099_10885 PF00583 Acetyltransferase (GNAT) family C0099_10890 PF02574 Homocysteine S-methyltransferase C0099_10895 PF12833 Helix-turn-helix domain C0099_10900 PF01934 Protein of unknown function DUF86 C0099_10905 PF01909 Nucleotidyltransferase domain C0099_10910 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain C0099_10910 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain C0099_10915 PF00578 AhpC/TSA family C0099_10920 PF11412 Disulphide bond corrector protein DsbC C0099_10920 PF13899 Thioredoxin-like C0099_10925 PF07087 C0099_10925 C0099_10935 PF00182 Chitinase class I C0099_10960 PF13385 Concanavalin A-like lectin/glucanases superfamily C0099_10980 PF10145 C0099_10980 C0099_11005 PF03864 Phage major capsid protein E C0099_11010 PF02924 Bacteriophage lambda head decoration protein D C0099_11015 PF01343 Peptidase family S49 C0099_11020 PF05136 C0099_11020 C0099_11030 PF08765 Mor transcription activator family C0099_11035 PF05876 C0099_11035 C0099_11060 PF13662 Toprim domain C0099_11065 PF09889 C0099_11065 C0099_11085 PF01381 Helix-turn-helix C0099_11100 PF13511 C0099_11100 C0099_11110 PF04383 KilA-N domain C0099_11115 PF00550 Phosphopantetheine attachment site C0099_11150 PF10065 C0099_11150 C0099_11160 PF07505 C0099_11160 C0099_11170 PF11753 C0099_11170 C0099_11185 PF00145 C-5 cytosine-specific DNA methylase C0099_11210 PF13986 C0099_11210 C0099_11215 PF00589 Phage integrase family C0099_11225 PF01557 Fumarylacetoacetate (FAA) hydrolase family C0099_11230 PF01274 Malate synthase C0099_11235 PF00009 Elongation factor Tu GTP binding domain C0099_11235 PF00679 Elongation factor G C-terminus C0099_11235 PF03764 Elongation factor G, domain IV C0099_11235 PF14492 Elongation Factor G, domain II C0099_11240 PF13937 C0099_11240 C0099_11245 PF00266 Aminotransferase class-V C0099_11250 PF03971 Monomeric isocitrate dehydrogenase C0099_11255 PF02872 5'-nucleotidase, C-terminal domain C0099_11270 PF08770 Sulphur oxidation protein SoxZ C0099_11275 PF13501 Sulfur oxidation protein SoxY C0099_11280 PF13442 Cytochrome C oxidase, cbb3-type, subunit III C0099_11285 PF00174 Oxidoreductase molybdopterin binding domain C0099_11285 PF03404 Mo-co oxidoreductase dimerisation domain C0099_11290 PF12840 Helix-turn-helix domain C0099_11295 PF00034 Cytochrome c C0099_11300 PF07992 Pyridine nucleotide-disulphide oxidoreductase C0099_11300 PF09242 Flavocytochrome c sulphide dehydrogenase, flavin-binding C0099_11300 PF10518 TAT (twin-arginine translocation) pathway signal sequence C0099_11305 PF13442 Cytochrome C oxidase, cbb3-type, subunit III C0099_11310 PF00293 NUDIX domain C0099_11315 PF00692 dUTPase C0099_11320 PF02441 Flavoprotein C0099_11320 PF04127 DNA / pantothenate metabolism flavoprotein C0099_11325 PF04002 RadC-like JAB domain C0099_11330 PF01548 C0099_11330 C0099_11330 PF02371 C0099_11330 C0099_11335 PF13275 S4 domain C0099_11340 PF09830 ATP adenylyltransferase C0099_11345 PF03692 C0099_11345 C0099_11350 PF03692 C0099_11350 C0099_11355 PF02810 SEC-C motif C0099_11355 PF03695 Uncharacterised protein family (UPF0149) C0099_11360 PF02390 Putative methyltransferase C0099_11365 PF01197 Ribosomal protein L31 C0099_11375 PF00342 Phosphoglucose isomerase C0099_11380 PF00929 Exonuclease C0099_11390 PF03193 Protein of unknown function, DUF258 C0099_11395 PF00108 Thiolase, N-terminal domain C0099_11395 PF02803 Thiolase, C-terminal domain C0099_11400 PF03186 C0099_11400 C0099_11405 PF00293 NUDIX domain C0099_11410 PF07963 Prokaryotic N-terminal methylation motif C0099_11410 PF12019 Type II transport protein GspH C0099_11425 PF13681 C0099_11425 C0099_11425 PF14341 C0099_11425 C0099_11430 PF05567 Neisseria PilC beta-propeller domain C0099_11435 PF07963 Prokaryotic N-terminal methylation motif C0099_11435 PF16732 C0099_11435 C0099_11440 PF07963 Prokaryotic N-terminal methylation motif C0099_11445 PF07963 Prokaryotic N-terminal methylation motif C0099_11445 PF16074 C0099_11445 C0099_11450 PF13681 C0099_11450 C0099_11450 PF14341 C0099_11450 C0099_11455 PF05567 Neisseria PilC beta-propeller domain C0099_11460 PF07963 Prokaryotic N-terminal methylation motif C0099_11460 PF16732 C0099_11460 C0099_11475 PF07963 Prokaryotic N-terminal methylation motif C0099_11475 PF16732 C0099_11475 C0099_11480 PF05567 Neisseria PilC beta-propeller domain C0099_11485 PF14341 C0099_11485 C0099_11490 PF07963 Prokaryotic N-terminal methylation motif C0099_11490 PF16074 C0099_11490 C0099_11495 PF07963 Prokaryotic N-terminal methylation motif C0099_11500 PF07963 Prokaryotic N-terminal methylation motif C0099_11500 PF12019 Type II transport protein GspH C0099_11505 PF07963 Prokaryotic N-terminal methylation motif C0099_11505 PF12019 Type II transport protein GspH C0099_11510 PF01934 Protein of unknown function DUF86 C0099_11515 PF01909 Nucleotidyltransferase domain C0099_11520 PF04461 Protein of unknown function (DUF520) C0099_11525 PF06865 Protein of unknown function (DUF1255) C0099_11530 PF10981 C0099_11530 C0099_11535 PF00764 Arginosuccinate synthase C0099_11540 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain C0099_11540 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain C0099_11545 PF00202 Aminotransferase class-III C0099_11550 PF01649 Ribosomal protein S20 C0099_11555 PF03023 C0099_11555 C0099_11560 PF00132 Bacterial transferase hexapeptide (six repeats) C0099_11570 PF00550 Phosphopantetheine attachment site C0099_11575 PF01926 50S ribosome-binding GTPase C0099_11575 PF11981 C0099_11575 C0099_11580 PF11067 C0099_11580 C0099_11585 PF00990 GGDEF domain C0099_11590 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family C0099_11595 PF02655 ATP-grasp domain C0099_11605 PF00535 Glycosyl transferase family 2 C0099_11610 PF05050 Methyltransferase FkbM domain C0099_11615 PF01467 Cytidylyltransferase C0099_11620 PF04464 CDP-Glycerol:Poly(glycerophosphate) glycerophosphotransferase C0099_11625 PF13641 Glycosyltransferase like family 2 C0099_11630 PF00669 Bacterial flagellin N-terminal helical region C0099_11630 PF00700 Bacterial flagellin C-terminal helical region C0099_11630 PF07196 Flagellin hook IN motif C0099_11635 PF00669 Bacterial flagellin N-terminal helical region C0099_11635 PF00700 Bacterial flagellin C-terminal helical region C0099_11635 PF07196 Flagellin hook IN motif C0099_11640 PF03646 FlaG protein C0099_11645 PF02465 C0099_11645 C0099_11645 PF07195 C0099_11645 C0099_11645 PF07196 Flagellin hook IN motif C0099_11650 PF02561 Flagellar protein FliS C0099_11655 PF05400 Flagellar protein FliT C0099_11660 PF02120 Flagellar hook-length control protein FliK C0099_11665 PF01312 FlhB HrpN YscU SpaS Family C0099_11670 PF07238 PilZ domain C0099_11670 PF07317 Flagellar regulator YcgR C0099_11675 PF02049 C0099_11675 C0099_11680 PF00072 Response regulator receiver domain C0099_11680 PF00158 Sigma-54 interaction domain C0099_11680 PF02954 Bacterial regulatory protein, Fis family C0099_11685 PF00512 His Kinase A (phospho-acceptor) domain C0099_11685 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase C0099_11685 PF13188 PAS domain C0099_11690 PF01514 Secretory protein of YscJ/FliF family C0099_11690 PF08345 C0099_11690 C0099_11695 PF01706 FliG C-terminal domain C0099_11695 PF14841 FliG middle domain C0099_11695 PF14842 FliG N-terminal domain C0099_11700 PF02108 C0099_11700 C0099_11705 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain C0099_11710 PF02050 Flagellar FliJ protein C0099_11715 PF02120 Flagellar hook-length control protein FliK C0099_11720 PF03748 C0099_11720 C0099_11725 PF01052 Surface presentation of antigens (SPOA) C0099_11725 PF02154 Flagellar motor switch protein FliM C0099_11730 PF01052 Surface presentation of antigens (SPOA) C0099_11735 PF04347 C0099_11735 C0099_11740 PF00813 C0099_11740 C0099_11745 PF01313 C0099_11745 C0099_11750 PF01311 C0099_11750 C0099_11760 PF00669 Bacterial flagellin N-terminal helical region C0099_11760 PF00700 Bacterial flagellin C-terminal helical region C0099_11765 PF00460 Flagella basal body rod protein C0099_11765 PF06429 Flagellar basal body rod FlgEFG protein C-terminal C0099_11770 PF01832 Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase C0099_11770 PF10135 C0099_11770 C0099_11775 PF02119 C0099_11775 C0099_11780 PF02107 C0099_11780 C0099_11785 PF00460 Flagella basal body rod protein C0099_11785 PF06429 Flagellar basal body rod FlgEFG protein C-terminal C0099_11790 PF00460 Flagella basal body rod protein C0099_11790 PF06429 Flagellar basal body rod FlgEFG protein C-terminal C0099_11795 PF00460 Flagella basal body rod protein C0099_11795 PF06429 Flagellar basal body rod FlgEFG protein C-terminal C0099_11795 PF07559 Flagellar basal body protein FlaE C0099_11800 PF03963 C0099_11800 C0099_11800 PF13860 FlgD Ig-like domain C0099_11800 PF13861 FlgD Tudor-like domain C0099_11805 PF00460 Flagella basal body rod protein C0099_11805 PF06429 Flagellar basal body rod FlgEFG protein C-terminal C0099_11810 PF00460 Flagella basal body rod protein C0099_11815 PF13144 SAF-like C0099_11820 PF04316 Anti-sigma-28 factor, FlgM C0099_11825 PF05130 FlgN protein C0099_11830 PF00204 DNA gyrase B C0099_11830 PF00986 DNA gyrase B subunit, carboxyl terminus C0099_11830 PF01751 Toprim domain C0099_11830 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase C0099_11835 PF05015 Plasmid maintenance system killer protein C0099_11840 PF01381 Helix-turn-helix C0099_11845 PF00521 DNA gyrase/topoisomerase IV, subunit A C0099_11845 PF03989 DNA gyrase C-terminal domain, beta-propeller C0099_11850 PF01548 C0099_11850 C0099_11850 PF02371 C0099_11850 C0099_11855 PF00691 OmpA family C0099_11855 PF13677 C0099_11855 C0099_11860 PF01618 C0099_11860 C0099_11865 PF04539 Sigma-70 region 3 C0099_11865 PF04542 Sigma-70 region 2 C0099_11865 PF04545 Sigma-70, region 4 C0099_11875 PF00448 SRP54-type protein, GTPase domain C0099_11880 PF00771 FHIPEP family C0099_11885 PF01312 FlhB HrpN YscU SpaS Family C0099_11890 PF02643 Uncharacterized ACR, COG1430 C0099_11895 PF00849 RNA pseudouridylate synthase C0099_11900 PF11026 C0099_11900 C0099_11910 PF05958 tRNA (Uracil-5-)-methyltransferase C0099_11915 PF08007 Cupin superfamily protein C0099_11920 PF06804 NlpB/DapX lipoprotein C0099_11925 PF00701 Dihydrodipicolinate synthetase family C0099_11930 PF00850 Histone deacetylase domain C0099_11935 PF07726 ATPase family associated with various cellular activities (AAA) C0099_11940 PF01882 C0099_11940 C0099_11945 PF01841 Transglutaminase-like superfamily C0099_11945 PF11992 C0099_11945 C0099_11945 PF13559 C0099_11945 C0099_11950 PF13406 Transglycosylase SLT domain C0099_11955 PF00140 Sigma-70 factor, region 1 C0099_11955 PF04539 Sigma-70 region 3 C0099_11955 PF04542 Sigma-70 region 2 C0099_11955 PF04545 Sigma-70, region 4 C0099_11960 PF01476 LysM domain C0099_11960 PF01551 Peptidase family M23 C0099_11965 PF01135 Protein-L-isoaspartate(D-aspartate) O-methyltransferase (PCMT) C0099_11970 PF01975 Survival protein SurE C0099_11975 PF13609 Gram-negative porin C0099_11980 PF00313 'Cold-shock' DNA-binding domain C0099_11985 PF03070 TENA/THI-4/PQQC family C0099_11995 PF00348 Polyprenyl synthetase C0099_12005 PF00248 Aldo/keto reductase family C0099_12010 PF01728 FtsJ-like methyltransferase C0099_12015 PF00270 DEAD/DEAH box helicase C0099_12015 PF00271 Helicase conserved C-terminal domain C0099_12030 PF02233 NAD(P) transhydrogenase beta subunit C0099_12035 PF12769 Domain of unknown function (DUF3814) C0099_12040 PF01262 Alanine dehydrogenase/PNT, C-terminal domain C0099_12040 PF05222 Alanine dehydrogenase/PNT, N-terminal domain C0099_12045 PF02754 C0099_12045 C0099_12045 PF12838 4Fe-4S dicluster domain C0099_12050 PF01565 FAD binding domain C0099_12050 PF02913 FAD linked oxidases, C-terminal domain C0099_12055 PF01565 FAD binding domain C0099_12055 PF02913 FAD linked oxidases, C-terminal domain C0099_12060 PF00392 Bacterial regulatory proteins, gntR family C0099_12060 PF07729 FCD domain C0099_12065 PF03480 Bacterial extracellular solute-binding protein, family 7 C0099_12070 PF04290 C0099_12070 C0099_12075 PF06808 C0099_12075 C0099_12080 PF04412 C0099_12080 C0099_12085 PF01989 Protein of unknown function DUF126 C0099_12090 PF01925 C0099_12090 C0099_12095 PF00392 Bacterial regulatory proteins, gntR family C0099_12100 PF00916 C0099_12100 C0099_12100 PF01740 STAS domain C0099_12105 PF00829 Ribosomal prokaryotic L21 protein C0099_12110 PF01016 Ribosomal L27 protein C0099_12115 PF01018 GTP1/OBG C0099_12115 PF01926 50S ribosome-binding GTPase C0099_12120 PF00696 Amino acid kinase family C0099_12120 PF01472 PUA domain C0099_12125 PF00370 FGGY family of carbohydrate kinases, N-terminal domain C0099_12125 PF02782 FGGY family of carbohydrate kinases, C-terminal domain C0099_12130 PF11964 SpoIIAA-like C0099_12135 PF00581 Rhodanese-like domain C0099_12140 PF01177 Asp/Glu/Hydantoin racemase C0099_12145 PF08331 C0099_12145 C0099_12145 PF13484 C0099_12145 C0099_12150 PF02367 Uncharacterised P-loop hydrolase UPF0079 C0099_12155 PF01520 N-acetylmuramoyl-L-alanine amidase C0099_12155 PF11741 AMIN domain C0099_12160 PF01687 Riboflavin kinase C0099_12160 PF06574 FAD synthetase C0099_12165 PF00133 tRNA synthetases class I (I, L, M and V) C0099_12165 PF06827 Zinc finger found in FPG and IleRS C0099_12165 PF08264 Anticodon-binding domain of tRNA C0099_12170 PF01252 C0099_12170 C0099_12175 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase C0099_12180 PF02401 LytB protein C0099_12185 PF00355 Rieske [2Fe-2S] domain C0099_12185 PF00848 Ring hydroxylating alpha subunit (catalytic domain) C0099_12190 PF02609 Exonuclease VII small subunit C0099_12195 PF00348 Polyprenyl synthetase C0099_12200 PF02779 Transketolase, pyrimidine binding domain C0099_12200 PF02780 Transketolase, C-terminal domain C0099_12200 PF13292 1-deoxy-D-xylulose-5-phosphate synthase C0099_12205 PF02649 Type I GTP cyclohydrolase folE2 C0099_12210 PF04366 C0099_12210 C0099_12215 PF01548 C0099_12215 C0099_12215 PF02371 C0099_12215 C0099_12220 PF01960 ArgJ family C0099_12225 PF01043 SecA preprotein cross-linking domain C0099_12225 PF02810 SEC-C motif C0099_12225 PF07516 SecA Wing and Scaffold domain C0099_12225 PF07517 SecA DEAD-like domain C0099_12230 PF05258 C0099_12230 C0099_12240 PF03331 UDP-3-O-acyl N-acetylglycosamine deacetylase C0099_12245 PF00091 Tubulin/FtsZ family, GTPase domain C0099_12245 PF12327 FtsZ family, C-terminal domain C0099_12250 PF02491 SHS2 domain inserted in FTSA C0099_12250 PF14450 Cell division protein FtsA C0099_12255 PF03799 Cell division protein FtsQ C0099_12255 PF08478 POTRA domain, FtsQ-type C0099_12260 PF01820 D-ala D-ala ligase N-terminus C0099_12260 PF07478 D-ala D-ala ligase C-terminus C0099_12265 PF01225 Mur ligase family, catalytic domain C0099_12265 PF02875 Mur ligase family, glutamate ligase domain C0099_12265 PF08245 Mur ligase middle domain C0099_12270 PF03033 Glycosyltransferase family 28 N-terminal domain C0099_12270 PF04101 Glycosyltransferase family 28 C-terminal domain C0099_12275 PF01098 C0099_12275 C0099_12280 PF08245 Mur ligase middle domain C0099_12285 PF00953 Glycosyl transferase family 4 C0099_12285 PF10555 Phospho-N-acetylmuramoyl-pentapeptide-transferase signature 1 C0099_12290 PF01225 Mur ligase family, catalytic domain C0099_12290 PF02875 Mur ligase family, glutamate ligase domain C0099_12290 PF08245 Mur ligase middle domain C0099_12295 PF01225 Mur ligase family, catalytic domain C0099_12295 PF02875 Mur ligase family, glutamate ligase domain C0099_12295 PF08245 Mur ligase middle domain C0099_12300 PF00905 Penicillin binding protein transpeptidase domain C0099_12300 PF03717 Penicillin-binding Protein dimerisation domain C0099_12305 PF04999 C0099_12305 C0099_12310 PF01795 MraW methylase family C0099_12315 PF02381 MraZ protein C0099_12335 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases C0099_12340 PF02021 Uncharacterised protein family UPF0102 C0099_12345 PF13580 SIS domain C0099_12350 PF04972 BON domain C0099_12355 PF01225 Mur ligase family, catalytic domain C0099_12355 PF02875 Mur ligase family, glutamate ligase domain C0099_12355 PF08245 Mur ligase middle domain C0099_12365 PF08534 Redoxin C0099_12370 PF01220 Dehydroquinase class II C0099_12375 PF00364 Biotin-requiring enzyme C0099_12380 PF00289 Carbamoyl-phosphate synthase L chain, N-terminal domain C0099_12380 PF02785 Biotin carboxylase C-terminal domain C0099_12380 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain C0099_12385 PF06325 Ribosomal protein L11 methyltransferase (PrmA) C0099_12390 PF11906 C0099_12390 C0099_12390 PF13719 C0099_12390 C0099_12395 PF05433 C0099_12395 C0099_12400 PF00294 pfkB family carbohydrate kinase C0099_12405 PF13444 Acetyltransferase (GNAT) domain C0099_12410 PF01553 Acyltransferase C0099_12415 PF00149 Calcineurin-like phosphoesterase C0099_12420 PF01370 NAD dependent epimerase/dehydratase family C0099_12425 PF04413 3-Deoxy-D-manno-octulosonic-acid transferase (kdotransferase) C0099_12430 PF01548 C0099_12430 C0099_12430 PF02371 C0099_12430 C0099_12435 PF02321 Outer membrane efflux protein C0099_12440 PF00581 Rhodanese-like domain C0099_12445 PF00563 EAL domain C0099_12445 PF00990 GGDEF domain C0099_12450 PF05175 Methyltransferase small domain C0099_12455 PF02230 Phospholipase/Carboxylesterase C0099_12460 PF00990 GGDEF domain C0099_12460 PF02743 Cache domain C0099_12465 PF00817 impB/mucB/samB family C0099_12465 PF11798 IMS family HHH motif C0099_12465 PF11799 impB/mucB/samB family C-terminal domain C0099_12470 PF01497 Periplasmic binding protein C0099_12475 PF01435 Peptidase family M48 C0099_12480 PF12836 Helix-hairpin-helix motif C0099_12485 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases C0099_12490 PF00005 ABC transporter C0099_12495 PF01032 FecCD transport family C0099_12500 PF00593 TonB dependent receptor C0099_12500 PF07715 TonB-dependent Receptor Plug Domain C0099_12505 PF02277 Phosphoribosyltransferase C0099_12510 PF00990 GGDEF domain C0099_12515 PF00294 pfkB family carbohydrate kinase C0099_12520 PF01370 NAD dependent epimerase/dehydratase family C0099_12525 PF01075 Glycosyltransferase family 9 (heptosyltransferase) C0099_12530 PF01075 Glycosyltransferase family 9 (heptosyltransferase) C0099_12535 PF00534 Glycosyl transferases group 1 C0099_12535 PF13439 Glycosyltransferase Family 4 C0099_12540 PF06293 Lipopolysaccharide kinase (Kdo/WaaP) family C0099_12545 PF06293 Lipopolysaccharide kinase (Kdo/WaaP) family C0099_12550 PF06293 Lipopolysaccharide kinase (Kdo/WaaP) family C0099_12555 PF00535 Glycosyl transferase family 2 C0099_12560 PF00082 Subtilase family C0099_12570 PF00005 ABC transporter C0099_12570 PF00664 ABC transporter transmembrane region C0099_12575 PF04542 Sigma-70 region 2 C0099_12575 PF04545 Sigma-70, region 4 C0099_12580 PF00132 Bacterial transferase hexapeptide (six repeats) C0099_12590 PF06293 Lipopolysaccharide kinase (Kdo/WaaP) family C0099_12600 PF02543 Carbamoyltransferase C0099_12600 PF16861 C0099_12600 C0099_12605 PF04365 Protein of unknown function (DUF497) C0099_12615 PF02661 Fic/DOC family C0099_12615 PF13310 C0099_12615 C0099_12625 PF09721 C0099_12625 C0099_12630 PF10066 C0099_12630 C0099_12635 PF00990 GGDEF domain C0099_12635 PF08447 PAS fold C0099_12635 PF08448 PAS fold C0099_12640 PF00005 ABC transporter C0099_12645 PF01593 Flavin containing amine oxidoreductase C0099_12645 PF13450 NAD(P)-binding Rossmann-like domain C0099_12650 PF04138 C0099_12650 C0099_12660 PF00534 Glycosyl transferases group 1 C0099_12660 PF13439 Glycosyltransferase Family 4 C0099_12665 PF05050 Methyltransferase FkbM domain C0099_12675 PF02706 Chain length determinant protein C0099_12680 PF13692 Glycosyl transferases group 1 C0099_12685 PF08241 Methyltransferase domain C0099_12690 PF14305 C0099_12690 C0099_12700 PF00665 Integrase core domain C0099_12700 PF13936 Helix-turn-helix domain C0099_12705 PF04932 C0099_12705 C0099_12710 PF00534 Glycosyl transferases group 1 C0099_12710 PF13439 Glycosyltransferase Family 4 C0099_12715 PF03808 C0099_12715 C0099_12720 PF00534 Glycosyl transferases group 1 C0099_12725 PF00535 Glycosyl transferase family 2 C0099_12730 PF00908 dTDP-4-dehydrorhamnose 3,5-epimerase C0099_12735 PF16363 C0099_12735 C0099_12740 PF01370 NAD dependent epimerase/dehydratase family C0099_12750 PF00534 Glycosyl transferases group 1 C0099_12750 PF13439 Glycosyltransferase Family 4 C0099_12755 PF02397 C0099_12755 C0099_12755 PF13727 CoA-binding domain C0099_12760 PF13440 C0099_12760 C0099_12765 PF14907 Uncharacterised nucleotidyltransferase C0099_12770 PF13471 C0099_12770 C0099_12775 PF00535 Glycosyl transferase family 2 C0099_12780 PF00535 Glycosyl transferase family 2 C0099_12795 PF00483 Nucleotidyl transferase C0099_12795 PF01050 Mannose-6-phosphate isomerase C0099_12810 PF01909 Nucleotidyltransferase domain C0099_12815 PF01381 Helix-turn-helix C0099_12820 PF06296 C0099_12820 C0099_12825 PF00753 Metallo-beta-lactamase superfamily C0099_12825 PF07521 RNA-metabolising metallo-beta-lactamase C0099_12825 PF10996 Beta-Casp domain C0099_12830 PF00534 Glycosyl transferases group 1 C0099_12830 PF00535 Glycosyl transferase family 2 C0099_12830 PF13439 Glycosyltransferase Family 4 C0099_12835 PF13432 Tetratricopeptide repeat C0099_12840 PF13176 Tetratricopeptide repeat C0099_12840 PF13432 Tetratricopeptide repeat C0099_12840 PF13844 Glycosyl transferase family 41 C0099_12840 PF14559 Tetratricopeptide repeat C0099_12845 PF01535 PPR repeat C0099_12845 PF07721 Tetratricopeptide repeat C0099_12845 PF13432 Tetratricopeptide repeat C0099_12845 PF13844 Glycosyl transferase family 41 C0099_12845 PF14559 Tetratricopeptide repeat C0099_12850 PF13429 Tetratricopeptide repeat C0099_12850 PF13432 Tetratricopeptide repeat C0099_12850 PF13844 Glycosyl transferase family 41 C0099_12855 PF00535 Glycosyl transferase family 2 C0099_12855 PF13692 Glycosyl transferases group 1 C0099_12855 PF14307 C0099_12855 C0099_12865 PF13641 Glycosyltransferase like family 2 C0099_12870 PF00005 ABC transporter C0099_12875 PF01061 C0099_12875 C0099_12880 PF13616 PPIC-type PPIASE domain C0099_12895 PF00263 C0099_12895 C0099_12895 PF03958 Bacterial type II/III secretion system short domain C0099_12905 PF10741 C0099_12905 C0099_12915 PF03934 Type II secretion system (T2SS), protein K C0099_12920 PF07963 Prokaryotic N-terminal methylation motif C0099_12925 PF07963 Prokaryotic N-terminal methylation motif C0099_12935 PF07963 Prokaryotic N-terminal methylation motif C0099_12935 PF08334 Type II secretion system (T2SS), protein G C0099_12940 PF00482 Type II secretion system (T2SS), protein F C0099_12945 PF00437 Type II/IV secretion system protein C0099_12945 PF05157 Type II secretion system (T2SS), protein E, N-terminal domain C0099_12950 PF04138 C0099_12950 C0099_12955 PF00535 Glycosyl transferase family 2 C0099_12960 PF13231 C0099_12960 C0099_12975 PF00535 Glycosyl transferase family 2 C0099_12980 PF02719 Polysaccharide biosynthesis protein C0099_12980 PF13727 CoA-binding domain C0099_12985 PF00953 Glycosyl transferase family 4 C0099_12990 PF01370 NAD dependent epimerase/dehydratase family C0099_12995 PF00476 DNA polymerase family A C0099_12995 PF01367 5'-3' exonuclease, C-terminal SAM fold C0099_12995 PF01612 3'-5' exonuclease C0099_12995 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain C0099_13000 PF03641 Possible lysine decarboxylase C0099_13005 PF11191 Protein of unknown function (DUF2782) C0099_13010 PF01636 Phosphotransferase enzyme family C0099_13020 PF01467 Cytidylyltransferase C0099_13025 PF02410 Oligomerisation domain C0099_13030 PF02590 Predicted SPOUT methyltransferase C0099_13035 PF02545 Maf-like protein C0099_13040 PF00575 S1 RNA binding domain C0099_13040 PF10150 Ribonuclease E/G family C0099_13045 PF13419 Haloacid dehalogenase-like hydrolase C0099_13055 PF01330 RuvA N terminal domain C0099_13055 PF07499 RuvA, C-terminal domain C0099_13055 PF14520 Helix-hairpin-helix domain C0099_13060 PF05491 Holliday junction DNA helicase ruvB C-terminus C0099_13060 PF05496 Holliday junction DNA helicase ruvB N-terminus C0099_13070 PF01925 C0099_13070 C0099_13075 PF00512 His Kinase A (phospho-acceptor) domain C0099_13075 PF00989 PAS fold C0099_13075 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase C0099_13080 PF00072 Response regulator receiver domain C0099_13080 PF00158 Sigma-54 interaction domain C0099_13085 PF13937 C0099_13085 C0099_13090 PF00474 Sodium:solute symporter family C0099_13115 PF05164 Cell division protein ZapA C0099_13125 PF01790 C0099_13125 C0099_13130 PF10636 Hemin uptake protein hemP C0099_13135 PF04324 BFD-like [2Fe-2S] binding domain C0099_13140 PF00210 Ferritin-like domain C0099_13145 PF03544 Gram-negative bacterial TonB protein C-terminal C0099_13150 PF01618 C0099_13150 C0099_13155 PF02472 Biopolymer transport protein ExbD/TolR C0099_13160 PF16576 C0099_13160 C0099_13165 PF00005 ABC transporter C0099_13165 PF02687 C0099_13165 C0099_13165 PF12704 MacB-like periplasmic core domain C0099_13170 PF02321 Outer membrane efflux protein C0099_13175 PF00593 TonB dependent receptor C0099_13175 PF07715 TonB-dependent Receptor Plug Domain C0099_13180 PF16357 C0099_13180 C0099_13185 PF10029 C0099_13185 C0099_13190 PF10670 C0099_13190 C0099_13200 PF00072 Response regulator receiver domain C0099_13200 PF00158 Sigma-54 interaction domain C0099_13200 PF02954 Bacterial regulatory protein, Fis family C0099_13205 PF00512 His Kinase A (phospho-acceptor) domain C0099_13205 PF00672 HAMP domain C0099_13205 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase C0099_13210 PF13767 C0099_13210 C0099_13215 PF13442 Cytochrome C oxidase, cbb3-type, subunit III C0099_13220 PF04214 C0099_13220 C0099_13225 PF00512 His Kinase A (phospho-acceptor) domain C0099_13225 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase C0099_13230 PF00072 Response regulator receiver domain C0099_13230 PF00486 Transcriptional regulatory protein, C terminal C0099_13235 PF01545 Cation efflux family C0099_13240 PF13411 MerR HTH family regulatory protein C0099_13245 PF02321 Outer membrane efflux protein C0099_13250 PF07731 Multicopper oxidase C0099_13250 PF07732 Multicopper oxidase C0099_13255 PF00127 Copper binding proteins, plastocyanin/azurin family C0099_13260 PF11604 Copper binding periplasmic protein CusF C0099_13275 PF00034 Cytochrome c C0099_13285 PF13520 Amino acid permease C0099_13295 PF00122 E1-E2 ATPase C0099_13295 PF00403 Heavy-metal-associated domain C0099_13295 PF00702 haloacid dehalogenase-like hydrolase C0099_13300 PF11666 C0099_13300 C0099_13305 PF04140 Isoprenylcysteine carboxyl methyltransferase (ICMT) family C0099_13310 PF04945 YHS domain C0099_13315 PF11666 C0099_13315 C0099_13330 PF13091 PLD-like domain C0099_13335 PF00376 MerR family regulatory protein C0099_13335 PF09278 MerR, DNA binding C0099_13340 PF00122 E1-E2 ATPase C0099_13340 PF00403 Heavy-metal-associated domain C0099_13340 PF00702 haloacid dehalogenase-like hydrolase C0099_13345 PF00403 Heavy-metal-associated domain C0099_13350 PF01135 Protein-L-isoaspartate(D-aspartate) O-methyltransferase (PCMT) C0099_13355 PF01850 PIN domain C0099_13360 PF02604 Antitoxin Phd_YefM, type II toxin-antitoxin system C0099_13365 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family C0099_13365 PF03466 LysR substrate binding domain C0099_13370 PF04055 Radical SAM superfamily C0099_13370 PF08497 C0099_13370 C0099_13370 PF11842 C0099_13370 C0099_13375 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase C0099_13375 PF07730 Histidine kinase C0099_13375 PF08447 PAS fold C0099_13380 PF00072 Response regulator receiver domain C0099_13380 PF00196 Bacterial regulatory proteins, luxR family C0099_13385 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain C0099_13385 PF00672 HAMP domain C0099_13385 PF08447 PAS fold C0099_13385 PF12729 C0099_13385 C0099_13390 PF00563 EAL domain C0099_13390 PF00990 GGDEF domain C0099_13390 PF08448 PAS fold C0099_13390 PF13426 PAS domain C0099_13390 PF17159 C0099_13390 C0099_13395 PF00563 EAL domain C0099_13395 PF00989 PAS fold C0099_13395 PF00990 GGDEF domain C0099_13395 PF08448 PAS fold C0099_13400 PF01963 C0099_13400 C0099_13405 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain C0099_13405 PF00672 HAMP domain C0099_13410 PF01566 C0099_13410 C0099_13415 PF13505 Outer membrane protein beta-barrel domain C0099_13420 PF04367 C0099_13420 C0099_13425 PF13279 Thioesterase-like superfamily C0099_13430 PF02754 C0099_13430 C0099_13435 PF02589 Uncharacterised ACR, YkgG family COG1556 C0099_13435 PF11870 C0099_13435 C0099_13435 PF13183 4Fe-4S dicluster domain C0099_13440 PF02589 Uncharacterised ACR, YkgG family COG1556 C0099_13450 PF04336 C0099_13450 C0099_13455 PF03352 Methyladenine glycosylase C0099_13460 PF00156 Phosphoribosyl transferase domain C0099_13460 PF13793 N-terminal domain of ribose phosphate pyrophosphokinase C0099_13465 PF00591 Glycosyl transferase family, a/b domain C0099_13465 PF02885 Glycosyl transferase family, helical bundle domain C0099_13465 PF07831 Pyrimidine nucleoside phosphorylase C-terminal domain C0099_13470 PF08668 HDOD domain C0099_13475 PF07793 C0099_13475 C0099_13480 PF04143 C0099_13480 C0099_13495 PF12760 Transposase zinc-ribbon domain C0099_13495 PF12762 C0099_13495 C0099_13515 PF00717 Peptidase S24-like C0099_13525 PF03852 DNA mismatch endonuclease Vsr C0099_13530 PF00145 C-5 cytosine-specific DNA methylase C0099_13545 PF00353 Hemolysin-type calcium-binding repeat (2 copies) C0099_13545 PF06594 C0099_13545 C0099_13550 PF02086 D12 class N6 adenine-specific DNA methyltransferase C0099_13555 PF10122 C0099_13555 C0099_13565 PF14301 C0099_13565 C0099_13575 PF13550 C0099_13575 C0099_13585 PF06791 C0099_13585 C0099_13590 PF08809 C0099_13590 C0099_13605 PF07030 C0099_13605 C0099_13615 PF10124 C0099_13615 C0099_13625 PF10123 C0099_13625 C0099_13640 PF07505 C0099_13640 C0099_13645 PF05069 C0099_13645 C0099_13650 PF04233 C0099_13650 C0099_13655 PF06074 C0099_13655 C0099_13670 PF10097 C0099_13670 C0099_13675 PF08822 C0099_13675 C0099_13690 PF07087 C0099_13690 C0099_13700 PF08291 Peptidase M15 C0099_13710 PF08765 Mor transcription activator family C0099_13715 PF06252 C0099_13715 C0099_13720 PF00216 Bacterial DNA-binding protein C0099_13730 PF07352 Bacteriophage Mu Gam like protein C0099_13760 PF09299 Mu transposase, C-terminal C0099_13765 PF13619 C0099_13765 C0099_13775 PF13693 Winged helix-turn-helix DNA-binding C0099_13780 PF00717 Peptidase S24-like C0099_13785 PF08241 Methyltransferase domain C0099_13795 PF00586 AIR synthase related protein, N-terminal domain C0099_13795 PF02769 AIR synthase related protein, C-terminal domain C0099_13800 PF04608 Phosphatidylglycerophosphatase A C0099_13805 PF02464 Competence-damaged protein C0099_13810 PF00154 recA bacterial DNA recombination protein C0099_13815 PF02631 RecX family C0099_13820 PF00005 ABC transporter C0099_13820 PF12399 Branched-chain amino acid ATP-binding cassette transporter C0099_13825 PF00309 C0099_13825 C0099_13825 PF04552 Sigma-54, DNA binding domain C0099_13825 PF04963 Sigma-54 factor, core binding domain C0099_13830 PF02482 Sigma 54 modulation protein / S30EA ribosomal protein C0099_13835 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 C0099_13840 PF02603 HPr Serine kinase N terminus C0099_13840 PF07475 HPr Serine kinase C-terminal domain C0099_13845 PF00291 Pyridoxal-phosphate dependent enzyme C0099_13845 PF00585 C-terminal regulatory domain of Threonine dehydratase C0099_13850 PF01812 5-formyltetrahydrofolate cyclo-ligase family C0099_13855 PF01464 Transglycosylase SLT domain C0099_13860 PF13460 NADH(P)-binding C0099_13865 PF01743 Poly A polymerase head domain C0099_13865 PF12627 Probable RNA and SrmB- binding site of polymerase A C0099_13870 PF11146 C0099_13870 C0099_13875 PF00043 Glutathione S-transferase, C-terminal domain C0099_13875 PF02798 Glutathione S-transferase, N-terminal domain C0099_13880 PF12697 Alpha/beta hydrolase family C0099_13885 PF13561 Enoyl-(Acyl carrier protein) reductase C0099_13890 PF01171 PP-loop family C0099_13895 PF00498 FHA domain C0099_13900 PF01565 FAD binding domain C0099_13900 PF02754 C0099_13900 C0099_13900 PF02913 FAD linked oxidases, C-terminal domain C0099_13900 PF11880 C0099_13900 C0099_13900 PF12447 C0099_13900 C0099_13900 PF13183 4Fe-4S dicluster domain C0099_13910 PF00156 Phosphoribosyl transferase domain C0099_13915 PF03372 Endonuclease/Exonuclease/phosphatase family C0099_13925 PF00156 Phosphoribosyl transferase domain C0099_13930 PF08895 C0099_13930 C0099_13935 PF08279 HTH domain C0099_13935 PF13280 C0099_13935 C0099_13940 PF02604 Antitoxin Phd_YefM, type II toxin-antitoxin system C0099_13945 PF01850 PIN domain C0099_13950 PF01235 C0099_13950 C0099_13955 PF03992 Antibiotic biosynthesis monooxygenase C0099_13960 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily C0099_13965 PF00563 EAL domain C0099_13975 PF01520 N-acetylmuramoyl-L-alanine amidase C0099_13980 PF01565 FAD binding domain C0099_13980 PF02873 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain C0099_13985 PF05232 C0099_13985 C0099_13990 PF07690 Major Facilitator Superfamily C0099_13995 PF00005 ABC transporter C0099_13995 PF12399 Branched-chain amino acid ATP-binding cassette transporter C0099_14000 PF00005 ABC transporter C0099_14005 PF02653 C0099_14005 C0099_14010 PF02653 C0099_14010 C0099_14015 PF13458 Periplasmic binding protein C0099_14020 PF00990 GGDEF domain C0099_14035 PF07228 Stage II sporulation protein E (SpoIIE) C0099_14040 PF00497 Bacterial extracellular solute-binding proteins, family 3 C0099_14045 PF00072 Response regulator receiver domain C0099_14045 PF00512 His Kinase A (phospho-acceptor) domain C0099_14045 PF00989 PAS fold C0099_14045 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase C0099_14045 PF08448 PAS fold C0099_14050 PF00072 Response regulator receiver domain C0099_14050 PF00486 Transcriptional regulatory protein, C terminal C0099_14060 PF01048 Phosphorylase superfamily C0099_14060 PF10423 Bacterial AMP nucleoside phosphorylase N-terminus C0099_14065 PF01323 DSBA-like thioredoxin domain C0099_14070 PF03447 Homoserine dehydrogenase, NAD binding domain C0099_14085 PF00171 Aldehyde dehydrogenase family C0099_14090 PF00557 Metallopeptidase family M24 C0099_14090 PF01321 Creatinase/Prolidase N-terminal domain C0099_14095 PF00202 Aminotransferase class-III C0099_14100 PF02230 Phospholipase/Carboxylesterase C0099_14105 PF07238 PilZ domain C0099_14105 PF12945 Flagellar protein YcgR C0099_14110 PF13975 C0099_14110 C0099_14115 PF00009 Elongation factor Tu GTP binding domain C0099_14115 PF03144 Elongation factor Tu domain 2 C0099_14115 PF16658 C0099_14115 C0099_14120 PF05683 Fumarase C-terminus C0099_14125 PF05681 C0099_14125 C0099_14130 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family C0099_14130 PF03466 LysR substrate binding domain C0099_14135 PF00180 Isocitrate/isopropylmalate dehydrogenase C0099_14140 PF03401 Tripartite tricarboxylate transporter family receptor C0099_14145 PF01970 C0099_14145 C0099_14145 PF07331 C0099_14145 C0099_14150 PF02682 Allophanate hydrolase subunit 1 C0099_14155 PF02626 Allophanate hydrolase subunit 2 C0099_14160 PF03746 LamB/YcsF family C0099_14165 PF05433 C0099_14165 C0099_14170 PF07075 Protein of unknown function (DUF1343) C0099_14175 PF03061 Thioesterase superfamily C0099_14180 PF03641 Possible lysine decarboxylase C0099_14185 PF00586 AIR synthase related protein, N-terminal domain C0099_14185 PF02769 AIR synthase related protein, C-terminal domain C0099_14190 PF07690 Major Facilitator Superfamily C0099_14200 PF07883 Cupin domain C0099_14205 PF13489 Methyltransferase domain C0099_14210 PF00085 Thioredoxin C0099_14215 PF06041 Bacterial protein of unknown function (DUF924) C0099_14225 PF04191 Phospholipid methyltransferase C0099_14230 PF00909 Ammonium Transporter Family C0099_14235 PF00004 ATPase family associated with various cellular activities (AAA) C0099_14240 PF08668 HDOD domain C0099_14245 PF08241 Methyltransferase domain C0099_14250 PF01235 C0099_14250 C0099_14255 PF02028 BCCT family transporter C0099_14265 PF00551 Formyl transferase C0099_14265 PF13740 ACT domain C0099_14270 PF12706 Beta-lactamase superfamily domain C0099_14280 PF02597 ThiS family C0099_14290 PF06146 C0099_14290 C0099_14300 PF06055 C0099_14300 C0099_14305 PF02308 C0099_14305 C0099_14310 PF07883 Cupin domain C0099_14315 PF13649 Methyltransferase domain C0099_14325 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region C0099_14330 PF07784 C0099_14330 C0099_14340 PF01381 Helix-turn-helix C0099_14345 PF04298 C0099_14345 C0099_14355 PF00665 Integrase core domain C0099_14355 PF13936 Helix-turn-helix domain C0099_14365 PF11185 C0099_14365 C0099_14370 PF10987 C0099_14370 C0099_14375 PF10387 Protein of unknown function (DUF2442) C0099_14380 PF01850 PIN domain C0099_14385 PF01402 Ribbon-helix-helix protein, copG family C0099_14390 PF00809 Pterin binding enzyme C0099_14390 PF02310 B12 binding domain C0099_14390 PF02574 Homocysteine S-methyltransferase C0099_14390 PF02607 B12 binding domain C0099_14390 PF02965 Vitamin B12 dependent methionine synthase, activation domain C0099_14400 PF01243 Pyridoxamine 5'-phosphate oxidase C0099_14400 PF10590 Pyridoxine 5'-phosphate oxidase C-terminal dimerisation region C0099_14405 PF12974 ABC transporter, phosphonate, periplasmic substrate-binding protein C0099_14410 PF00005 ABC transporter C0099_14415 PF00528 Binding-protein-dependent transport system inner membrane component C0099_14420 PF00581 Rhodanese-like domain C0099_14425 PF07690 Major Facilitator Superfamily C0099_14430 PF01078 Magnesium chelatase, subunit ChlI C0099_14430 PF13335 C0099_14430 C0099_14430 PF13541 Subunit ChlI of Mg-chelatase C0099_14435 PF05987 C0099_14435 C0099_14440 PF01435 Peptidase family M48 C0099_14445 PF03480 Bacterial extracellular solute-binding protein, family 7 C0099_14450 PF04290 C0099_14450 C0099_14455 PF06808 C0099_14455 C0099_14460 PF01019 Gamma-glutamyltranspeptidase C0099_14465 PF00440 Bacterial regulatory proteins, tetR family C0099_14470 PF04380 C0099_14470 C0099_14475 PF00543 Nitrogen regulatory protein P-II C0099_14480 PF00909 Ammonium Transporter Family C0099_14485 PF09694 C0099_14485 C0099_14490 PF00672 HAMP domain C0099_14490 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase C0099_14495 PF00072 Response regulator receiver domain C0099_14495 PF00486 Transcriptional regulatory protein, C terminal C0099_14500 PF07813 LTXXQ motif family protein C0099_14505 PF00702 haloacid dehalogenase-like hydrolase C0099_14510 PF10011 Predicted membrane protein (DUF2254) C0099_14515 PF00005 ABC transporter C0099_14515 PF12848 ABC transporter C0099_14515 PF16326 C0099_14515 C0099_14525 PF02424 ApbE family C0099_14530 PF02951 Prokaryotic glutathione synthetase, N-terminal domain C0099_14530 PF02955 Prokaryotic glutathione synthetase, ATP-grasp domain C0099_14535 PF08886 Glutamate-cysteine ligase C0099_14540 PF07669 Eco57I restriction-modification methylase C0099_14545 PF00106 short chain dehydrogenase C0099_14550 PF01636 Phosphotransferase enzyme family C0099_14550 PF13671 AAA domain C0099_14555 PF05751 C0099_14555 C0099_14560 PF04909 Amidohydrolase C0099_14565 PF01435 Peptidase family M48 C0099_14570 PF12224 C0099_14570 C0099_14575 PF07722 Peptidase C26 C0099_14580 PF00892 EamA-like transporter family C0099_14590 PF03795 YCII-related domain C0099_14595 PF06983 3-demethylubiquinone-9 3-methyltransferase C0099_14610 PF05016 Plasmid stabilisation system protein C0099_14615 PF08378 C0099_14615 C0099_14620 PF13391 C0099_14620 C0099_14635 PF00394 Multicopper oxidase C0099_14635 PF07731 Multicopper oxidase C0099_14635 PF07732 Multicopper oxidase C0099_14640 PF00107 Zinc-binding dehydrogenase C0099_14640 PF08240 Alcohol dehydrogenase GroES-like domain C0099_14645 PF07690 Major Facilitator Superfamily C0099_14650 PF01396 C0099_14650 C0099_14650 PF08378 C0099_14650 C0099_14655 PF12441 C0099_14655 C0099_14660 PF04365 Protein of unknown function (DUF497) C0099_14665 PF07859 alpha/beta hydrolase fold C0099_14670 PF16983 C0099_14670 C0099_14675 PF00005 ABC transporter C0099_14690 PF04365 Protein of unknown function (DUF497) C0099_14695 PF01212 Beta-eliminating lyase C0099_14700 PF02515 CoA-transferase family III C0099_14705 PF00378 Enoyl-CoA hydratase/isomerase family C0099_14710 PF06808 C0099_14710 C0099_14715 PF04290 C0099_14715 C0099_14720 PF03480 Bacterial extracellular solute-binding protein, family 7 C0099_14725 PF00266 Aminotransferase class-V C0099_14730 PF00392 Bacterial regulatory proteins, gntR family C0099_14730 PF07729 FCD domain C0099_14735 PF01565 FAD binding domain C0099_14735 PF02913 FAD linked oxidases, C-terminal domain C0099_14735 PF13183 4Fe-4S dicluster domain C0099_14740 PF00501 AMP-binding enzyme C0099_14740 PF13193 AMP-binding enzyme C-terminal domain C0099_14750 PF01327 Polypeptide deformylase C0099_14755 PF09335 C0099_14755 C0099_14760 PF02417 C0099_14760 C0099_14770 PF02668 Taurine catabolism dioxygenase TauD, TfdA family C0099_14780 PF13531 Bacterial extracellular solute-binding protein C0099_14785 PF05973 C0099_14785 C0099_14790 PF13744 Helix-turn-helix domain C0099_14795 PF02661 Fic/DOC family C0099_14795 PF13776 C0099_14795 C0099_14805 PF01381 Helix-turn-helix C0099_14810 PF05973 C0099_14810 C0099_14815 PF11390 C0099_14815 C0099_14820 PF11390 C0099_14820 C0099_14825 PF02634 FdhD/NarQ family C0099_14830 PF00384 Molybdopterin oxidoreductase C0099_14830 PF01568 Molydopterin dinucleotide binding domain C0099_14830 PF04879 Molybdopterin oxidoreductase Fe4S4 domain C0099_14830 PF10588 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region C0099_14830 PF12838 4Fe-4S dicluster domain C0099_14830 PF13510 2Fe-2S iron-sulfur cluster binding domain C0099_14835 PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit C0099_14835 PF10589 NADH-ubiquinone oxidoreductase-F iron-sulfur binding region C0099_14840 PF01257 Thioredoxin-like [2Fe-2S] ferredoxin C0099_14845 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family C0099_14845 PF12727 PBP superfamily domain C0099_14850 PF00920 Dehydratase family C0099_14855 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase C0099_14860 PF12903 Protein of unknown function (DUF3830) C0099_14865 PF01177 Asp/Glu/Hydantoin racemase C0099_14870 PF01979 Amidohydrolase family C0099_14875 PF06808 C0099_14875 C0099_14880 PF04290 C0099_14880 C0099_14885 PF03480 Bacterial extracellular solute-binding protein, family 7 C0099_14890 PF00392 Bacterial regulatory proteins, gntR family C0099_14890 PF07729 FCD domain C0099_14900 PF01979 Amidohydrolase family C0099_14905 PF06808 C0099_14905 C0099_14910 PF04290 C0099_14910 C0099_14915 PF03480 Bacterial extracellular solute-binding protein, family 7 C0099_14920 PF01177 Asp/Glu/Hydantoin racemase C0099_14925 PF01979 Amidohydrolase family C0099_14930 PF01557 Fumarylacetoacetate (FAA) hydrolase family C0099_14935 PF00072 Response regulator receiver domain C0099_14935 PF14559 Tetratricopeptide repeat C0099_14940 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase C0099_14945 PF00027 Cyclic nucleotide-binding domain C0099_14945 PF13545 Crp-like helix-turn-helix domain C0099_14960 PF07043 C0099_14960 C0099_14965 PF04972 BON domain C0099_14970 PF13609 Gram-negative porin C0099_14975 PF04116 C0099_14975 C0099_14980 PF00465 Iron-containing alcohol dehydrogenase C0099_14985 PF12697 Alpha/beta hydrolase family C0099_14990 PF00392 Bacterial regulatory proteins, gntR family C0099_14990 PF07729 FCD domain C0099_14995 PF13714 Phosphoenolpyruvate phosphomutase C0099_15000 PF00920 Dehydratase family C0099_15005 PF12831 FAD dependent oxidoreductase C0099_15010 PF06808 C0099_15010 C0099_15015 PF04290 C0099_15015 C0099_15020 PF03480 Bacterial extracellular solute-binding protein, family 7 C0099_15025 PF00392 Bacterial regulatory proteins, gntR family C0099_15025 PF07729 FCD domain C0099_15030 PF05995 Cysteine dioxygenase type I C0099_15035 PF01970 C0099_15035 C0099_15040 PF07331 C0099_15040 C0099_15045 PF03401 Tripartite tricarboxylate transporter family receptor C0099_15050 PF00698 Acyl transferase domain C0099_15055 PF06833 Malonate decarboxylase gamma subunit (MdcE) C0099_15060 PF01039 Carboxyl transferase domain C0099_15065 PF06857 C0099_15065 C0099_15070 PF16957 C0099_15070 C0099_15075 PF01814 Hemerythrin HHE cation binding domain C0099_15085 PF00563 EAL domain C0099_15085 PF00990 GGDEF domain C0099_15085 PF14827 Sensory domain of two-component sensor kinase C0099_15095 PF00497 Bacterial extracellular solute-binding proteins, family 3 C0099_15095 PF03458 C0099_15095 C0099_15100 PF00078 Reverse transcriptase (RNA-dependent DNA polymerase) C0099_15100 PF08388 C0099_15100 C0099_15110 PF01850 PIN domain C0099_15115 PF09957 C0099_15115 C0099_15120 PF13328 HD domain C0099_15125 PF00512 His Kinase A (phospho-acceptor) domain C0099_15125 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase C0099_15125 PF08447 PAS fold C0099_15130 PF07963 Prokaryotic N-terminal methylation motif C0099_15130 PF16732 C0099_15130 C0099_15135 PF07963 Prokaryotic N-terminal methylation motif C0099_15160 PF01695 IstB-like ATP binding protein C0099_15165 PF00665 Integrase core domain C0099_15175 PF13442 Cytochrome C oxidase, cbb3-type, subunit III C0099_15180 PF00580 UvrD/REP helicase N-terminal domain C0099_15180 PF13361 UvrD-like helicase C-terminal domain C0099_15185 PF01258 Prokaryotic dksA/traR C4-type zinc finger C0099_15200 PF04055 Radical SAM superfamily C0099_15200 PF16881 C0099_15200 C0099_15205 PF03099 Biotin/lipoate A/B protein ligase family C0099_15210 PF04359 Protein of unknown function (DUF493) C0099_15215 PF01063 Aminotransferase class IV C0099_15220 PF00768 D-alanyl-D-alanine carboxypeptidase C0099_15220 PF07943 Penicillin-binding protein 5, C-terminal domain C0099_15225 PF03330 Rare lipoprotein A (RlpA)-like double-psi beta-barrel C0099_15225 PF05036 Sporulation related domain C0099_15230 PF01098 C0099_15230 C0099_15235 PF00905 Penicillin binding protein transpeptidase domain C0099_15235 PF03717 Penicillin-binding Protein dimerisation domain C0099_15240 PF04093 C0099_15240 C0099_15245 PF04085 rod shape-determining protein MreC C0099_15250 PF06723 MreB/Mbl protein C0099_15255 PF02686 Glu-tRNAGln amidotransferase C subunit C0099_15260 PF01425 Amidase C0099_15265 PF02637 GatB domain C0099_15265 PF02934 GatB/GatE catalytic domain C0099_15270 PF12276 C0099_15270 C0099_15275 PF04143 C0099_15275 C0099_15280 PF13230 Glutamine amidotransferases class-II C0099_15285 PF01230 HIT domain C0099_15295 PF00512 His Kinase A (phospho-acceptor) domain C0099_15295 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase C0099_15295 PF11808 C0099_15295 C0099_15295 PF13188 PAS domain C0099_15300 PF00072 Response regulator receiver domain C0099_15300 PF00486 Transcriptional regulatory protein, C terminal C0099_15305 PF06155 Protein of unknown function (DUF971) C0099_15310 PF01209 ubiE/COQ5 methyltransferase family C0099_15315 PF04280 Tim44-like domain C0099_15325 PF01610 C0099_15325 C0099_15325 PF13542 C0099_15325 C0099_15330 PF00401 ATP synthase, Delta/Epsilon chain, long alpha-helix domain C0099_15330 PF02823 ATP synthase, Delta/Epsilon chain, beta-sandwich domain C0099_15335 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain C0099_15335 PF02874 ATP synthase alpha/beta family, beta-barrel domain C0099_15340 PF00231 ATP synthase C0099_15345 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain C0099_15345 PF00306 ATP synthase alpha/beta chain, C terminal domain C0099_15345 PF02874 ATP synthase alpha/beta family, beta-barrel domain C0099_15350 PF00213 ATP synthase delta (OSCP) subunit C0099_15355 PF00430 ATP synthase B/B' CF(0) C0099_15360 PF00137 ATP synthase subunit C C0099_15365 PF00119 ATP synthase A chain C0099_15375 PF11700 C0099_15375 C0099_15380 PF02195 ParB-like nuclease domain C0099_15385 PF13614 AAA domain C0099_15390 PF02527 rRNA small subunit methyltransferase G C0099_15395 PF01134 Glucose inhibited division protein A C0099_15395 PF13932 GidA associated domain 3 C0099_15405 PF01243 Pyridoxamine 5'-phosphate oxidase C0099_15415 PF00873 AcrB/AcrD/AcrF family C0099_15420 PF16576 C0099_15420 C0099_15425 PF00962 Adenosine/AMP deaminase C0099_15430 PF01845 CcdB protein C0099_15435 PF07362 Post-segregation antitoxin CcdA C0099_15440 PF08534 Redoxin C0099_15445 PF07690 Major Facilitator Superfamily C0099_15450 PF02634 FdhD/NarQ family C0099_15455 PF12804 MobA-like NTP transferase domain C0099_15465 PF01292 Prokaryotic cytochrome b561 C0099_15475 PF13247 4Fe-4S dicluster domain C0099_15480 PF00384 Molybdopterin oxidoreductase C0099_15480 PF01568 Molydopterin dinucleotide binding domain C0099_15480 PF04879 Molybdopterin oxidoreductase Fe4S4 domain C0099_15490 PF02613 Nitrate reductase delta subunit C0099_15495 PF00037 4Fe-4S binding domain C0099_15500 PF11748 C0099_15500 C0099_15505 PF11749 C0099_15505 C0099_15510 PF00158 Sigma-54 interaction domain C0099_15510 PF02954 Bacterial regulatory protein, Fis family C0099_15515 PF01883 Domain of unknown function DUF59 C0099_15515 PF10609 ParA/MinD ATPase like C0099_15520 PF12796 Ankyrin repeats (3 copies) C0099_15520 PF13606 Ankyrin repeat C0099_15530 PF03205 Molybdopterin guanine dinucleotide synthesis protein B C0099_15535 PF00072 Response regulator receiver domain C0099_15535 PF00158 Sigma-54 interaction domain C0099_15535 PF02954 Bacterial regulatory protein, Fis family C0099_15540 PF00512 His Kinase A (phospho-acceptor) domain C0099_15540 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase C0099_15540 PF17202 C0099_15540 C0099_15545 PF01435 Peptidase family M48 C0099_15550 PF00551 Formyl transferase C0099_15550 PF02911 Formyl transferase, C-terminal domain C0099_15555 PF01327 Polypeptide deformylase C0099_15560 PF01476 LysM domain C0099_15565 PF02481 DNA recombination-mediator protein A C0099_15570 PF04361 C0099_15570 C0099_15575 PF01131 DNA topoisomerase C0099_15575 PF01751 Toprim domain C0099_15575 PF13342 C0099_15575 C0099_15585 PF00078 Reverse transcriptase (RNA-dependent DNA polymerase) C0099_15585 PF08388 C0099_15585 C0099_15590 PF00210 Ferritin-like domain C0099_15595 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family C0099_15595 PF03466 LysR substrate binding domain C0099_15600 PF00595 PDZ domain (Also known as DHR or GLGF) C0099_15600 PF13180 PDZ domain C0099_15600 PF13365 Trypsin-like peptidase domain C0099_15605 PF01322 Cytochrome C' C0099_15610 PF01292 Prokaryotic cytochrome b561 C0099_15620 PF04828 Glutathione-dependent formaldehyde-activating enzyme C0099_15630 PF01850 PIN domain C0099_15635 PF01909 Nucleotidyltransferase domain C0099_15640 PF02661 Fic/DOC family C0099_15640 PF13784 Fic/DOC family N-terminal C0099_15645 PF11867 C0099_15645 C0099_15650 PF04134 C0099_15650 C0099_15655 PF04352 ProQ/FINO family C0099_15660 PF11239 C0099_15660 C0099_15665 PF01136 C0099_15665 C0099_15665 PF16325 C0099_15665 C0099_15670 PF00583 Acetyltransferase (GNAT) family C0099_15675 PF00005 ABC transporter C0099_15675 PF12848 ABC transporter C0099_15680 PF03610 PTS system fructose IIA component C0099_15685 PF00381 PTS HPr component phosphorylation site C0099_15690 PF00391 PEP-utilising enzyme, mobile domain C0099_15690 PF02896 PEP-utilising enzyme, TIM barrel domain C0099_15690 PF05524 PEP-utilising enzyme, N-terminal C0099_15695 PF00561 alpha/beta hydrolase fold C0099_15700 PF07021 Methionine biosynthesis protein MetW C0099_15710 PF00563 EAL domain C0099_15710 PF00990 GGDEF domain C0099_15710 PF08447 PAS fold C0099_15710 PF12860 C0099_15710 C0099_15715 PF07690 Major Facilitator Superfamily C0099_15725 PF00484 Carbonic anhydrase C0099_15730 PF00480 ROK family C0099_15735 PF00990 GGDEF domain C0099_15735 PF01590 GAF domain C0099_15740 PF00270 DEAD/DEAH box helicase C0099_15740 PF00271 Helicase conserved C-terminal domain C0099_15745 PF01208 Uroporphyrinogen decarboxylase (URO-D) C0099_15750 PF02386 Cation transport protein C0099_15755 PF02080 TrkA-C domain C0099_15755 PF02254 TrkA-N domain C0099_15760 PF00072 Response regulator receiver domain C0099_15760 PF02954 Bacterial regulatory protein, Fis family C0099_15760 PF14532 Sigma-54 interaction domain C0099_15765 PF00512 His Kinase A (phospho-acceptor) domain C0099_15765 PF00672 HAMP domain C0099_15765 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase C0099_15770 PF14334 C0099_15770 C0099_15775 PF01029 NusB family C0099_15775 PF01189 NOL1/NOP2/sun family C0099_15780 PF01925 C0099_15780 C0099_15785 PF01926 50S ribosome-binding GTPase C0099_15785 PF10396 GTP-binding protein TrmE N-terminus C0099_15785 PF12631 Catalytic cysteine-containing C-terminus of GTPase, MnmE C0099_15790 PF02096 60Kd inner membrane protein C0099_15790 PF14849 YidC periplasmic domain C0099_15795 PF01809 C0099_15795 C0099_15800 PF00825 Ribonuclease P C0099_15805 PF00468 Ribosomal protein L34