locus-tag class description J8L76_00015 PF01118 Semialdehyde dehydrogenase, NAD binding domain J8L76_00015 PF02774 Semialdehyde dehydrogenase, dimerisation domain J8L76_00020 PF00180 Isocitrate/isopropylmalate dehydrogenase J8L76_00025 PF00694 Aconitase C-terminal domain J8L76_00035 PF00330 Aconitase family (aconitate hydratase) J8L76_00040 PF12832 MFS_1 like family J8L76_00045 PF01264 Chorismate synthase J8L76_00055 PF11940 Domain of unknown function (DUF3458) Ig-like fold J8L76_00055 PF17432 Domain of unknown function (DUF3458_C) ARM repeats J8L76_00055 PF01433 Peptidase family M1 domain J8L76_00080 PF13296 Putative type VI secretion system Rhs element Vgr J8L76_00080 PF10106 Uncharacterized protein conserved in bacteria (DUF2345) J8L76_00080 PF04717 Type VI secretion system, phage-baseplate injector J8L76_00085 PF01842 ACT domain J8L76_00090 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain J8L76_00090 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain J8L76_00090 PF00205 Thiamine pyrophosphate enzyme, central domain J8L76_00100 PF13193 AMP-binding enzyme C-terminal domain J8L76_00100 PF00501 AMP-binding enzyme J8L76_00110 PF13361 UvrD-like helicase C-terminal domain J8L76_00110 PF00580 UvrD/REP helicase N-terminal domain J8L76_00110 PF12705 PD-(D/E)XK nuclease superfamily J8L76_00120 PF00037 4Fe-4S binding domain J8L76_00120 PF11953 Domain of unknown function (DUF3470) J8L76_00125 PF00085 Thioredoxin J8L76_00130 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain J8L76_00130 PF07497 Rho termination factor, RNA-binding domain J8L76_00130 PF07498 Rho termination factor, N-terminal domain J8L76_00135 PF01197 Ribosomal protein L31 J8L76_00145 PF13442 Cytochrome C oxidase, cbb3-type, subunit III J8L76_00145 PF14715 N-terminal domain of cytochrome oxidase-cbb3, FixP J8L76_00150 PF00929 Exonuclease J8L76_00155 PF01435 Peptidase family M48 J8L76_00155 PF16491 CAAX prenyl protease N-terminal, five membrane helices J8L76_00160 PF03193 RsgA GTPase J8L76_00165 PF05971 RNA methyltransferase J8L76_00170 PF00563 EAL domain J8L76_00170 PF03707 Bacterial signalling protein N terminal repeat J8L76_00170 PF00990 Diguanylate cyclase, GGDEF domain J8L76_00190 PF00206 Lyase J8L76_00190 PF10415 Fumarase C C-terminus J8L76_00195 PF01841 Transglutaminase-like superfamily J8L76_00195 PF08379 Bacterial transglutaminase-like N-terminal region J8L76_00200 PF14403 Circularly permuted ATP-grasp type 2 J8L76_00210 PF13442 Cytochrome C oxidase, cbb3-type, subunit III J8L76_00210 PF00034 Cytochrome c J8L76_00215 PF13442 Cytochrome C oxidase, cbb3-type, subunit III J8L76_00220 PF00196 Bacterial regulatory proteins, luxR family J8L76_00220 PF00072 Response regulator receiver domain J8L76_00225 PF00512 His Kinase A (phospho-acceptor) domain J8L76_00225 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase J8L76_00235 PF14403 Circularly permuted ATP-grasp type 2 J8L76_00235 PF04168 A predicted alpha-helical domain with a conserved ER motif. J8L76_00240 PF14403 Circularly permuted ATP-grasp type 2 J8L76_00245 PF17113 Regulatory signalling modulator protein AmpE J8L76_00245 PF03186 CobD/Cbib protein J8L76_00250 PF00293 NUDIX domain J8L76_00265 PF00958 GMP synthase C terminal domain J8L76_00265 PF00117 Glutamine amidotransferase class-I J8L76_00270 PF04461 Protein of unknown function (DUF520) J8L76_00275 PF06865 Pyrimidine/purine nucleoside phosphorylase J8L76_00285 PF00764 Arginosuccinate synthase J8L76_00290 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain J8L76_00290 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain J8L76_00295 PF00202 Aminotransferase class-III J8L76_00305 PF01649 Ribosomal protein S20 J8L76_00310 PF03023 Lipid II flippase MurJ J8L76_00315 PF01161 Phosphatidylethanolamine-binding protein J8L76_00320 PF00155 Aminotransferase class I and II J8L76_00335 PF00365 Phosphofructokinase J8L76_00340 PF05191 Adenylate kinase, active site lid J8L76_00345 PF02348 Cytidylyltransferase J8L76_00350 PF03966 Trm112p-like protein J8L76_00355 PF02606 Tetraacyldisaccharide-1-P 4'-kinase J8L76_00360 PF02472 Biopolymer transport protein ExbD/TolR J8L76_00365 PF01618 MotA/TolQ/ExbB proton channel family J8L76_00370 PF02601 Exonuclease VII, large subunit J8L76_00370 PF13742 OB-fold nucleic acid binding domain J8L76_00375 PF02777 Iron/manganese superoxide dismutases, C-terminal domain J8L76_00375 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain J8L76_00380 PF07693 KAP family P-loop domain J8L76_00415 PF07724 AAA domain (Cdc48 subfamily) J8L76_00415 PF10431 C-terminal, D2-small domain, of ClpB protein J8L76_00415 PF06689 ClpX C4-type zinc finger J8L76_00430 PF04345 Chorismate lyase J8L76_00445 PF00849 RNA pseudouridylate synthase J8L76_00450 PF06315 Isocitrate dehydrogenase kinase/phosphatase (AceK) J8L76_00455 PF03971 Monomeric isocitrate dehydrogenase J8L76_00460 PF00180 Isocitrate/isopropylmalate dehydrogenase J8L76_00470 PF02630 SCO1/SenC J8L76_00490 PF00990 Diguanylate cyclase, GGDEF domain J8L76_00500 PF01075 Glycosyltransferase family 9 (heptosyltransferase) J8L76_00505 PF00676 Dehydrogenase E1 component J8L76_00510 PF02779 Transketolase, pyrimidine binding domain J8L76_00510 PF02780 Transketolase, C-terminal domain J8L76_00530 PF00535 Glycosyl transferase family 2 J8L76_00540 PF02222 ATP-grasp domain J8L76_00545 PF01408 Oxidoreductase family, NAD-binding Rossmann fold J8L76_00545 PF02894 Oxidoreductase family, C-terminal alpha/beta domain J8L76_00550 PF18674 TarS beta-glycosyltransferase C-terminal domain 1 J8L76_00550 PF00535 Glycosyl transferase family 2 J8L76_00560 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family J8L76_00565 PF00535 Glycosyl transferase family 2 J8L76_00580 PF00669 Bacterial flagellin N-terminal helical region J8L76_00580 PF00700 Bacterial flagellin C-terminal helical region J8L76_00580 PF07196 Flagellin hook IN motif J8L76_00585 PF00700 Bacterial flagellin C-terminal helical region J8L76_00585 PF07196 Flagellin hook IN motif J8L76_00585 PF00669 Bacterial flagellin N-terminal helical region J8L76_00595 PF07195 Flagellar hook-associated protein 2 C-terminus J8L76_00595 PF02465 Flagellar hook-associated protein 2 N-terminus J8L76_00600 PF02561 Flagellar protein FliS J8L76_00615 PF01312 FlhB HrpN YscU SpaS Family J8L76_00620 PF07317 Flagellar regulator YcgR J8L76_00620 PF07238 PilZ domain J8L76_00625 PF02049 Flagellar hook-basal body complex protein FliE J8L76_00630 PF02954 Bacterial regulatory protein, Fis family J8L76_00630 PF00072 Response regulator receiver domain J8L76_00630 PF00158 Sigma-54 interaction domain J8L76_00635 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase J8L76_00635 PF00512 His Kinase A (phospho-acceptor) domain J8L76_00640 PF08345 Flagellar M-ring protein C-terminal J8L76_00640 PF01514 Secretory protein of YscJ/FliF family J8L76_00645 PF01706 FliG C-terminal domain J8L76_00645 PF14841 FliG middle domain J8L76_00645 PF14842 FliG N-terminal domain J8L76_00655 PF18269 T3SS EscN ATPase C-terminal domain J8L76_00655 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain J8L76_00665 PF02120 Flagellar hook-length control protein FliK J8L76_00675 PF02154 Flagellar motor switch protein FliM J8L76_00675 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term J8L76_00680 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term J8L76_00680 PF16973 Flagellar motor switch protein FliN N-terminal J8L76_00685 PF04347 Flagellar biosynthesis protein, FliO J8L76_00690 PF00813 FliP family J8L76_00695 PF01313 Bacterial export proteins, family 3 J8L76_00700 PF01311 Bacterial export proteins, family 1 J8L76_00710 PF00669 Bacterial flagellin N-terminal helical region J8L76_00715 PF00460 Flagella basal body rod protein J8L76_00715 PF06429 Flagellar basal body rod FlgEFG protein C-terminal J8L76_00720 PF10135 Rod binding protein J8L76_00720 PF01832 Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase J8L76_00725 PF02119 Flagellar P-ring protein J8L76_00730 PF02107 Flagellar L-ring protein J8L76_00735 PF06429 Flagellar basal body rod FlgEFG protein C-terminal J8L76_00735 PF00460 Flagella basal body rod protein J8L76_00740 PF00460 Flagella basal body rod protein J8L76_00740 PF06429 Flagellar basal body rod FlgEFG protein C-terminal J8L76_00745 PF07559 Flagellar basal body protein FlaE J8L76_00745 PF00460 Flagella basal body rod protein J8L76_00745 PF06429 Flagellar basal body rod FlgEFG protein C-terminal J8L76_00750 PF03963 Flagellar hook capping protein - N-terminal region J8L76_00750 PF13861 FlgD Tudor-like domain J8L76_00750 PF13860 FlgD Ig-like domain J8L76_00755 PF06429 Flagellar basal body rod FlgEFG protein C-terminal J8L76_00755 PF00460 Flagella basal body rod protein J8L76_00760 PF00460 Flagella basal body rod protein J8L76_00780 PF13677 Membrane MotB of proton-channel complex MotA/MotB J8L76_00780 PF00691 OmpA family J8L76_00785 PF01618 MotA/TolQ/ExbB proton channel family J8L76_00790 PF04542 Sigma-70 region 2 J8L76_00790 PF04539 Sigma-70 region 3 J8L76_00790 PF04545 Sigma-70, region 4 J8L76_00800 PF00448 SRP54-type protein, GTPase domain J8L76_00805 PF00771 FHIPEP family J8L76_00810 PF01312 FlhB HrpN YscU SpaS Family J8L76_00815 PF02895 Signal transducing histidine kinase, homodimeric domain J8L76_00815 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase J8L76_00815 PF01627 Hpt domain J8L76_00815 PF00072 Response regulator receiver domain J8L76_00815 PF01584 CheW-like domain J8L76_00820 PF04344 Chemotaxis phosphatase, CheZ J8L76_00825 PF00072 Response regulator receiver domain J8L76_00830 PF01584 CheW-like domain J8L76_00830 PF00072 Response regulator receiver domain J8L76_00835 PF01584 CheW-like domain J8L76_00835 PF00072 Response regulator receiver domain J8L76_00840 PF01339 CheB methylesterase J8L76_00840 PF00072 Response regulator receiver domain J8L76_00845 PF03975 CheD chemotactic sensory transduction J8L76_00850 PF01739 CheR methyltransferase, SAM binding domain J8L76_00850 PF03705 CheR methyltransferase, all-alpha domain J8L76_00855 PF00672 HAMP domain J8L76_00855 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain J8L76_00855 PF02203 Tar ligand binding domain homologue J8L76_00860 PF01584 CheW-like domain J8L76_00865 PF01584 CheW-like domain J8L76_00865 PF09078 CheY binding J8L76_00865 PF02895 Signal transducing histidine kinase, homodimeric domain J8L76_00865 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase J8L76_00865 PF01627 Hpt domain J8L76_00870 PF00072 Response regulator receiver domain J8L76_00875 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain J8L76_00875 PF00672 HAMP domain J8L76_00875 PF02743 Cache domain J8L76_00880 PF00691 OmpA family J8L76_00880 PF13677 Membrane MotB of proton-channel complex MotA/MotB J8L76_00885 PF01618 MotA/TolQ/ExbB proton channel family J8L76_00910 PF12802 MarR family J8L76_00915 PF02321 Outer membrane efflux protein J8L76_00920 PF00529 HlyD membrane-fusion protein of T1SS J8L76_00920 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion J8L76_00925 PF07690 Major Facilitator Superfamily J8L76_00930 PF09345 Domain of unknown function (DUF1987) J8L76_00935 PF00990 Diguanylate cyclase, GGDEF domain J8L76_00955 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family J8L76_00955 PF03466 LysR substrate binding domain J8L76_00965 PF07690 Major Facilitator Superfamily J8L76_00975 PF00583 Acetyltransferase (GNAT) family J8L76_00995 PF00497 Bacterial extracellular solute-binding proteins, family 3 J8L76_00995 PF01464 Transglycosylase SLT domain J8L76_01000 PF02403 Seryl-tRNA synthetase N-terminal domain J8L76_01000 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) J8L76_01010 PF00004 ATPase family associated with various cellular activities (AAA) J8L76_01010 PF16193 AAA C-terminal domain J8L76_01010 PF12002 MgsA AAA+ ATPase C terminal J8L76_01015 PF03548 Outer membrane lipoprotein carrier protein LolA J8L76_01020 PF01580 FtsK/SpoIIIE family J8L76_01020 PF09397 Ftsk gamma domain J8L76_01020 PF13491 4TM region of DNA translocase FtsK/SpoIIIE J8L76_01020 PF17854 FtsK alpha domain J8L76_01025 PF00027 Cyclic nucleotide-binding domain J8L76_01025 PF13545 Crp-like helix-turn-helix domain J8L76_01030 PF07992 Pyridine nucleotide-disulphide oxidoreductase J8L76_01035 PF00488 MutS domain V J8L76_01035 PF01713 Smr domain J8L76_01040 PF00543 Nitrogen regulatory protein P-II J8L76_01045 PF00795 Carbon-nitrogen hydrolase J8L76_01045 PF02540 NAD synthase J8L76_01050 PF00719 Inorganic pyrophosphatase J8L76_01055 PF03544 Gram-negative bacterial TonB protein C-terminal J8L76_01060 PF01618 MotA/TolQ/ExbB proton channel family J8L76_01065 PF02472 Biopolymer transport protein ExbD/TolR J8L76_01075 PF07715 TonB-dependent Receptor Plug Domain J8L76_01075 PF00593 TonB dependent receptor J8L76_01080 PF02514 CobN/Magnesium Chelatase J8L76_01080 PF11965 Domain of unknown function (DUF3479) J8L76_01090 PF00163 Ribosomal protein S4/S9 N-terminal domain J8L76_01090 PF01479 S4 domain J8L76_01105 PF01070 FMN-dependent dehydrogenase J8L76_01110 PF07715 TonB-dependent Receptor Plug Domain J8L76_01110 PF00593 TonB dependent receptor J8L76_01115 PF13640 2OG-Fe(II) oxygenase superfamily J8L76_01115 PF18331 PKHD-type hydroxylase C-terminal domain J8L76_01120 PF10634 Fe2+ transport protein J8L76_01135 PF03239 Iron permease FTR1 family J8L76_01150 PF02421 Ferrous iron transport protein B J8L76_01150 PF07670 Nucleoside recognition J8L76_01150 PF07664 Ferrous iron transport protein B C terminus J8L76_01155 PF00403 Heavy-metal-associated domain J8L76_01160 PF00403 Heavy-metal-associated domain J8L76_01175 PF06969 HemN C-terminal domain J8L76_01175 PF04055 Radical SAM superfamily J8L76_01180 PF00027 Cyclic nucleotide-binding domain J8L76_01180 PF13545 Crp-like helix-turn-helix domain J8L76_01185 PF01814 Hemerythrin HHE cation binding domain J8L76_01200 PF03060 Nitronate monooxygenase J8L76_01205 PF07521 Zn-dependent metallo-hydrolase RNA specificity domain J8L76_01205 PF10996 Beta-Casp domain J8L76_01205 PF00753 Metallo-beta-lactamase superfamily J8L76_01210 PF00582 Universal stress protein family J8L76_01225 PF13442 Cytochrome C oxidase, cbb3-type, subunit III J8L76_01225 PF14715 N-terminal domain of cytochrome oxidase-cbb3, FixP J8L76_01240 PF00115 Cytochrome C and Quinol oxidase polypeptide I J8L76_01250 PF00403 Heavy-metal-associated domain J8L76_01255 PF01008 Initiation factor 2 subunit family J8L76_01260 PF00596 Class II Aldolase and Adducin N-terminal domain J8L76_01270 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase J8L76_01270 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase J8L76_01275 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase J8L76_01275 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase J8L76_01285 PF00873 AcrB/AcrD/AcrF family J8L76_01290 PF07992 Pyridine nucleotide-disulphide oxidoreductase J8L76_01295 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion J8L76_01305 PF02254 TrkA-N domain J8L76_01305 PF02080 TrkA-C domain J8L76_01305 PF00999 Sodium/hydrogen exchanger family J8L76_01315 PF00689 Cation transporting ATPase, C-terminus J8L76_01315 PF00690 Cation transporter/ATPase, N-terminus J8L76_01320 PF02580 D-Tyr-tRNA(Tyr) deacylase J8L76_01325 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain J8L76_01325 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain J8L76_01330 PF00171 Aldehyde dehydrogenase family J8L76_01335 PF01614 Bacterial transcriptional regulator J8L76_01335 PF09339 IclR helix-turn-helix domain J8L76_01340 PF00768 D-alanyl-D-alanine carboxypeptidase J8L76_01345 PF00390 Malic enzyme, N-terminal domain J8L76_01345 PF03949 Malic enzyme, NAD binding domain J8L76_01345 PF01515 Phosphate acetyl/butaryl transferase J8L76_01350 PF00821 Phosphoenolpyruvate carboxykinase C-terminal P-loop domain J8L76_01350 PF17297 Phosphoenolpyruvate carboxykinase N-terminal domain J8L76_01355 PF00155 Aminotransferase class I and II J8L76_01365 PF01510 N-acetylmuramoyl-L-alanine amidase J8L76_01370 PF00158 Sigma-54 interaction domain J8L76_01370 PF00072 Response regulator receiver domain J8L76_01370 PF02954 Bacterial regulatory protein, Fis family J8L76_01375 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase J8L76_01375 PF00512 His Kinase A (phospho-acceptor) domain J8L76_01385 PF00471 Ribosomal protein L33 J8L76_01390 PF00830 Ribosomal L28 family J8L76_01395 PF04002 RadC-like JAB domain J8L76_01400 PF04127 DNA / pantothenate metabolism flavoprotein J8L76_01400 PF02441 Flavoprotein J8L76_01405 PF00692 dUTPase J8L76_01410 PF12794 Mechanosensitive ion channel inner membrane domain 1 J8L76_01410 PF12795 Mechanosensitive ion channel porin domain J8L76_01410 PF00924 Mechanosensitive ion channel J8L76_01415 PF01189 16S rRNA methyltransferase RsmB/F J8L76_01415 PF01029 NusB family J8L76_01425 PF00551 Formyl transferase J8L76_01435 PF09335 SNARE associated Golgi protein J8L76_01440 PF00072 Response regulator receiver domain J8L76_01445 PF01590 GAF domain J8L76_01445 PF00360 Phytochrome region J8L76_01445 PF08446 PAS fold J8L76_01445 PF00512 His Kinase A (phospho-acceptor) domain J8L76_01445 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase J8L76_01450 PF03707 Bacterial signalling protein N terminal repeat J8L76_01450 PF00563 EAL domain J8L76_01450 PF00990 Diguanylate cyclase, GGDEF domain J8L76_01455 PF08676 MutL C terminal dimerisation domain J8L76_01455 PF01119 DNA mismatch repair protein, C-terminal domain J8L76_01470 PF13442 Cytochrome C oxidase, cbb3-type, subunit III J8L76_01475 PF02769 AIR synthase related protein, C-terminal domain J8L76_01475 PF00586 AIR synthase related protein, N-terminal domain J8L76_01480 PF01594 AI-2E family transporter J8L76_01485 PF00308 Bacterial dnaA protein J8L76_01495 PF01743 Poly A polymerase head domain J8L76_01495 PF12627 Probable RNA and SrmB- binding site of polymerase A J8L76_01495 PF12626 Polymerase A arginine-rich C-terminus J8L76_01500 PF01288 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK) J8L76_01510 PF00672 HAMP domain J8L76_01510 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain J8L76_01510 PF17200 Single Cache domain 2 J8L76_01520 PF02548 Ketopantoate hydroxymethyltransferase J8L76_01525 PF02569 Pantoate-beta-alanine ligase J8L76_01530 PF02261 Aspartate decarboxylase J8L76_01540 PF00501 AMP-binding enzyme J8L76_01540 PF14535 AMP-binding enzyme C-terminal domain J8L76_01545 PF00465 Iron-containing alcohol dehydrogenase J8L76_01550 PF00171 Aldehyde dehydrogenase family J8L76_01555 PF01590 GAF domain J8L76_01555 PF02954 Bacterial regulatory protein, Fis family J8L76_01555 PF00158 Sigma-54 interaction domain J8L76_01580 PF07963 Prokaryotic N-terminal methylation motif J8L76_01585 PF12706 Beta-lactamase superfamily domain J8L76_01590 PF00498 FHA domain J8L76_01595 PF02423 Ornithine cyclodeaminase/mu-crystallin family J8L76_01600 PF03741 Integral membrane protein TerC family J8L76_01605 PF02629 CoA binding domain J8L76_01605 PF00549 CoA-ligase J8L76_01610 PF08442 ATP-grasp domain J8L76_01610 PF00549 CoA-ligase J8L76_01620 PF00083 Sugar (and other) transporter J8L76_01620 PF07690 Major Facilitator Superfamily J8L76_01630 PF03544 Gram-negative bacterial TonB protein C-terminal J8L76_01640 PF04166 Pyridoxal phosphate biosynthetic protein PdxA J8L76_01645 PF09312 SurA N-terminal domain J8L76_01645 PF00639 PPIC-type PPIASE domain J8L76_01650 PF04453 LPS transport system D J8L76_01650 PF03968 OstA-like protein J8L76_01655 PF01636 Phosphotransferase enzyme family J8L76_01660 PF00483 Nucleotidyl transferase J8L76_01665 PF00557 Metallopeptidase family M24 J8L76_01665 PF05195 Aminopeptidase P, N-terminal domain J8L76_01670 PF01494 FAD binding domain J8L76_01675 PF01207 Dihydrouridine synthase (Dus) J8L76_01680 PF02954 Bacterial regulatory protein, Fis family J8L76_01685 PF01808 AICARFT/IMPCHase bienzyme J8L76_01685 PF02142 MGS-like domain J8L76_01690 PF07017 Antimicrobial peptide resistance and lipid A acylation protein PagP J8L76_01695 PF02844 Phosphoribosylglycinamide synthetase, N domain J8L76_01695 PF01071 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain J8L76_01695 PF02843 Phosphoribosylglycinamide synthetase, C domain J8L76_01700 PF00990 Diguanylate cyclase, GGDEF domain J8L76_01700 PF07694 5TMR of 5TMR-LYT J8L76_01705 PF01218 Coproporphyrinogen III oxidase J8L76_01720 PF04375 HemX, putative uroporphyrinogen-III C-methyltransferase J8L76_01725 PF02602 Uroporphyrinogen-III synthase HemD J8L76_01730 PF01379 Porphobilinogen deaminase, dipyromethane cofactor binding domain J8L76_01730 PF03900 Porphobilinogen deaminase, C-terminal domain J8L76_01735 PF13180 PDZ domain J8L76_01735 PF17820 PDZ domain J8L76_01755 PF04397 LytTr DNA-binding domain J8L76_01755 PF00072 Response regulator receiver domain J8L76_01760 PF07694 5TMR of 5TMR-LYT J8L76_01760 PF06580 Histidine kinase J8L76_01760 PF13492 GAF domain J8L76_01760 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase J8L76_01765 PF00206 Lyase J8L76_01765 PF14698 Argininosuccinate lyase C-terminal J8L76_01775 PF00909 Ammonium Transporter Family J8L76_01795 PF00462 Glutaredoxin J8L76_01800 PF05175 Methyltransferase small domain J8L76_01800 PF17827 PrmC N-terminal domain J8L76_01805 PF03462 PCRF domain J8L76_01805 PF00472 RF-1 domain J8L76_01810 PF05201 Glutamyl-tRNAGlu reductase, N-terminal domain J8L76_01810 PF01488 Shikimate / quinate 5-dehydrogenase J8L76_01810 PF00745 Glutamyl-tRNAGlu reductase, dimerisation domain J8L76_01815 PF00005 ABC transporter J8L76_01815 PF12857 TOBE-like domain J8L76_01815 PF17850 CysA C-terminal regulatory domain J8L76_01820 PF00528 Binding-protein-dependent transport system inner membrane component J8L76_01825 PF00528 Binding-protein-dependent transport system inner membrane component J8L76_01835 PF00563 EAL domain J8L76_01835 PF00990 Diguanylate cyclase, GGDEF domain J8L76_01835 PF03707 Bacterial signalling protein N terminal repeat J8L76_01840 PF00034 Cytochrome c J8L76_01840 PF03150 Di-haem cytochrome c peroxidase J8L76_01840 PF14376 Haem-binding domain J8L76_01850 PF08521 Two-component sensor kinase N-terminal J8L76_01850 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase J8L76_01850 PF00512 His Kinase A (phospho-acceptor) domain J8L76_01855 PF00486 Transcriptional regulatory protein, C terminal J8L76_01855 PF00072 Response regulator receiver domain J8L76_01860 PF13533 Biotin-lipoyl like J8L76_01865 PF00005 ABC transporter J8L76_01880 PF00512 His Kinase A (phospho-acceptor) domain J8L76_01880 PF02702 Osmosensitive K+ channel His kinase sensor domain J8L76_01880 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase J8L76_01880 PF13492 GAF domain J8L76_01880 PF13493 Domain of unknown function (DUF4118) J8L76_01885 PF00486 Transcriptional regulatory protein, C terminal J8L76_01885 PF00072 Response regulator receiver domain J8L76_01890 PF02705 K+ potassium transporter J8L76_01895 PF00472 RF-1 domain J8L76_01900 PF04143 Sulphur transport J8L76_01905 PF01206 Sulfurtransferase TusA J8L76_01910 PF00118 TCP-1/cpn60 chaperonin family J8L76_01915 PF00166 Chaperonin 10 Kd subunit J8L76_01920 PF18766 SWI2/SNF2 ATPase J8L76_01920 PF04313 Type I restriction enzyme R protein N terminus (HSDR_N) J8L76_01920 PF12008 Type I restriction and modification enzyme - subunit R C terminal J8L76_01940 PF02384 N-6 DNA Methylase J8L76_01940 PF12161 HsdM N-terminal domain J8L76_01945 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain J8L76_01945 PF00672 HAMP domain J8L76_01950 PF17762 HTH domain found in ParB protein J8L76_01950 PF02195 ParB-like nuclease domain J8L76_01955 PF02391 MoaE protein J8L76_01960 PF02597 ThiS family J8L76_01965 PF00994 Probable molybdopterin binding domain J8L76_01965 PF03454 MoeA C-terminal region (domain IV) J8L76_01965 PF03453 MoeA N-terminal region (domain I and II) J8L76_01970 PF03205 Molybdopterin guanine dinucleotide synthesis protein B J8L76_01975 PF02665 Nitrate reductase gamma subunit J8L76_01980 PF02613 Nitrate reductase delta subunit J8L76_01985 PF14711 Respiratory nitrate reductase beta C-terminal J8L76_01985 PF13247 4Fe-4S dicluster domain J8L76_01990 PF14710 Respiratory nitrate reductase alpha N-terminal J8L76_01990 PF01568 Molydopterin dinucleotide binding domain J8L76_01990 PF00384 Molybdopterin oxidoreductase J8L76_01995 PF07690 Major Facilitator Superfamily J8L76_02000 PF07690 Major Facilitator Superfamily J8L76_02005 PF13675 Type IV pili methyl-accepting chemotaxis transducer N-term J8L76_02005 PF07730 Histidine kinase J8L76_02005 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase J8L76_02005 PF00672 HAMP domain J8L76_02010 PF00196 Bacterial regulatory proteins, luxR family J8L76_02010 PF00072 Response regulator receiver domain J8L76_02015 PF04055 Radical SAM superfamily J8L76_02015 PF06463 Molybdenum Cofactor Synthesis C J8L76_02020 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain J8L76_02020 PF08447 PAS fold J8L76_02020 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain J8L76_02020 PF08447 PAS fold J8L76_02030 PF00672 HAMP domain J8L76_02030 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain J8L76_02030 PF17202 Single cache domain 3 J8L76_02040 PF01145 SPFH domain / Band 7 family J8L76_02045 PF01144 Coenzyme A transferase J8L76_02050 PF00072 Response regulator receiver domain J8L76_02055 PF00072 Response regulator receiver domain J8L76_02055 PF00196 Bacterial regulatory proteins, luxR family J8L76_02060 PF00072 Response regulator receiver domain J8L76_02060 PF01339 CheB methylesterase J8L76_02065 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain J8L76_02065 PF08447 PAS fold J8L76_02065 PF13426 PAS domain J8L76_02070 PF00072 Response regulator receiver domain J8L76_02080 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase J8L76_02080 PF09078 CheY binding J8L76_02080 PF01584 CheW-like domain J8L76_02080 PF02895 Signal transducing histidine kinase, homodimeric domain J8L76_02080 PF01627 Hpt domain J8L76_02090 PF01584 CheW-like domain J8L76_02095 PF08448 PAS fold J8L76_02095 PF00512 His Kinase A (phospho-acceptor) domain J8L76_02095 PF13188 PAS domain J8L76_02095 PF00072 Response regulator receiver domain J8L76_02095 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase J8L76_02100 PF01169 Uncharacterized protein family UPF0016 J8L76_02105 PF01545 Cation efflux family J8L76_02120 PF00355 Rieske [2Fe-2S] domain J8L76_02125 PF00005 ABC transporter J8L76_02135 PF01979 Amidohydrolase family J8L76_02140 PF13188 PAS domain J8L76_02140 PF08448 PAS fold J8L76_02140 PF00512 His Kinase A (phospho-acceptor) domain J8L76_02140 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase J8L76_02140 PF00072 Response regulator receiver domain J8L76_02150 PF00072 Response regulator receiver domain J8L76_02155 PF08447 PAS fold J8L76_02155 PF08448 PAS fold J8L76_02155 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase J8L76_02170 PF00072 Response regulator receiver domain J8L76_02170 PF00158 Sigma-54 interaction domain J8L76_02170 PF02954 Bacterial regulatory protein, Fis family J8L76_02180 PF03466 LysR substrate binding domain J8L76_02180 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family J8L76_02190 PF02900 Catalytic LigB subunit of aromatic ring-opening dioxygenase J8L76_02200 PF01292 Prokaryotic cytochrome b561 J8L76_02205 PF04264 YceI-like domain J8L76_02210 PF04264 YceI-like domain J8L76_02235 PF04341 Protein of unknown function, DUF485 J8L76_02240 PF00474 Sodium:solute symporter family J8L76_02245 PF07690 Major Facilitator Superfamily J8L76_02250 PF00512 His Kinase A (phospho-acceptor) domain J8L76_02250 PF16527 Two-component sensor protein CpxA, periplasmic domain J8L76_02250 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase J8L76_02250 PF00672 HAMP domain J8L76_02255 PF00486 Transcriptional regulatory protein, C terminal J8L76_02255 PF00072 Response regulator receiver domain J8L76_02285 PF03749 Sugar fermentation stimulation protein RE domain J8L76_02285 PF17746 SfsA N-terminal OB domain J8L76_02310 PF13495 Phage integrase, N-terminal SAM-like domain J8L76_02310 PF00589 Phage integrase family J8L76_02325 PF12833 Helix-turn-helix domain J8L76_02330 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family J8L76_02330 PF03466 LysR substrate binding domain J8L76_02345 PF01977 3-octaprenyl-4-hydroxybenzoate carboxy-lyase J8L76_02350 PF01040 UbiA prenyltransferase family J8L76_02355 PF12821 Threonine/Serine exporter, ThrE J8L76_02365 PF01553 Acyltransferase J8L76_02365 PF00501 AMP-binding enzyme J8L76_02375 PF01494 FAD binding domain J8L76_02380 PF10411 Disulfide bond isomerase protein N-terminus J8L76_02380 PF13098 Thioredoxin-like domain J8L76_02385 PF00908 dTDP-4-dehydrorhamnose 3,5-epimerase J8L76_02390 PF00483 Nucleotidyl transferase J8L76_02395 PF04321 RmlD substrate binding domain J8L76_02400 PF16363 GDP-mannose 4,6 dehydratase J8L76_02405 PF00672 HAMP domain J8L76_02405 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain J8L76_02405 PF17200 Single Cache domain 2 J8L76_02410 PF00909 Ammonium Transporter Family J8L76_02415 PF06725 3D domain J8L76_02415 PF03562 MltA specific insert domain J8L76_02425 PF00293 NUDIX domain J8L76_02430 PF03884 DNA gyrase inhibitor YacG J8L76_02435 PF04073 Aminoacyl-tRNA editing domain J8L76_02445 PF02660 Glycerol-3-phosphate acyltransferase J8L76_02450 PF00814 Glycoprotease family J8L76_02455 PF01165 Ribosomal protein S21 J8L76_02465 PF10410 DnaB-helicase binding domain of primase J8L76_02465 PF08278 DNA primase DnaG DnaB-binding J8L76_02465 PF08275 DNA primase catalytic core, N-terminal domain J8L76_02465 PF01807 CHC2 zinc finger J8L76_02470 PF00140 Sigma-70 factor, region 1.2 J8L76_02470 PF04546 Sigma-70, non-essential region J8L76_02470 PF03979 Sigma-70 factor, region 1.1 J8L76_02470 PF04539 Sigma-70 region 3 J8L76_02470 PF04545 Sigma-70, region 4 J8L76_02470 PF04542 Sigma-70 region 2 J8L76_02505 PF08463 EcoEI R protein C-terminal J8L76_02505 PF00271 Helicase conserved C-terminal domain J8L76_02505 PF04313 Type I restriction enzyme R protein N terminus (HSDR_N) J8L76_02505 PF04851 Type III restriction enzyme, res subunit J8L76_02515 PF02384 N-6 DNA Methylase J8L76_02515 PF12161 HsdM N-terminal domain J8L76_02540 PF00535 Glycosyl transferase family 2 J8L76_02550 PF01339 CheB methylesterase J8L76_02550 PF00072 Response regulator receiver domain J8L76_02555 PF03358 NADPH-dependent FMN reductase J8L76_02560 PF02678 Pirin J8L76_02560 PF17954 Quercetinase C-terminal cupin domain J8L76_02565 PF03466 LysR substrate binding domain J8L76_02565 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family J8L76_02570 PF00486 Transcriptional regulatory protein, C terminal J8L76_02570 PF00072 Response regulator receiver domain J8L76_02575 PF13493 Domain of unknown function (DUF4118) J8L76_02575 PF13492 GAF domain J8L76_02575 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase J8L76_02575 PF00512 His Kinase A (phospho-acceptor) domain J8L76_02575 PF02702 Osmosensitive K+ channel His kinase sensor domain J8L76_02580 PF02669 K+-transporting ATPase, c chain J8L76_02590 PF03814 Potassium-transporting ATPase A subunit J8L76_02600 PF07690 Major Facilitator Superfamily J8L76_02615 PF08240 Alcohol dehydrogenase GroES-like domain J8L76_02615 PF00107 Zinc-binding dehydrogenase J8L76_02620 PF00672 HAMP domain J8L76_02620 PF01966 HD domain J8L76_02625 PF00580 UvrD/REP helicase N-terminal domain J8L76_02625 PF13361 UvrD-like helicase C-terminal domain J8L76_02635 PF08264 Anticodon-binding domain of tRNA J8L76_02635 PF00133 tRNA synthetases class I (I, L, M and V) J8L76_02635 PF13603 Leucyl-tRNA synthetase, Domain 2 J8L76_02635 PF09334 tRNA synthetases class I (M) J8L76_02645 PF14840 Processivity clamp loader gamma complex DNA pol III C-term J8L76_02645 PF06144 DNA polymerase III, delta subunit J8L76_02655 PF00171 Aldehyde dehydrogenase family J8L76_02665 PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain J8L76_02665 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain J8L76_02670 PF02899 Phage integrase, N-terminal SAM-like domain J8L76_02670 PF00589 Phage integrase family J8L76_02675 PF07072 Cell division protein J8L76_02680 PF01121 Dephospho-CoA kinase J8L76_02690 PF00291 Pyridoxal-phosphate dependent enzyme J8L76_02695 PF03309 Type III pantothenate kinase J8L76_02700 PF03099 Biotin/lipoate A/B protein ligase family J8L76_02700 PF02237 Biotin protein ligase C terminal domain J8L76_02700 PF08279 HTH domain J8L76_02705 PF00158 Sigma-54 interaction domain J8L76_02705 PF00072 Response regulator receiver domain J8L76_02705 PF02954 Bacterial regulatory protein, Fis family J8L76_02710 PF00512 His Kinase A (phospho-acceptor) domain J8L76_02710 PF00989 PAS fold J8L76_02710 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase J8L76_02720 PF03951 Glutamine synthetase, beta-Grasp domain J8L76_02720 PF00120 Glutamine synthetase, catalytic domain J8L76_02730 PF02445 Quinolinate synthetase A protein J8L76_02735 PF03707 Bacterial signalling protein N terminal repeat J8L76_02735 PF00990 Diguanylate cyclase, GGDEF domain J8L76_02735 PF00563 EAL domain J8L76_02740 PF03372 Endonuclease/Exonuclease/phosphatase family J8L76_02745 PF13091 PLD-like domain J8L76_02750 PF00749 tRNA synthetases class I (E and Q), catalytic domain J8L76_02755 PF03707 Bacterial signalling protein N terminal repeat J8L76_02755 PF00563 EAL domain J8L76_02755 PF00990 Diguanylate cyclase, GGDEF domain J8L76_02760 PF06071 Protein of unknown function (DUF933) J8L76_02760 PF01926 50S ribosome-binding GTPase J8L76_02765 PF01195 Peptidyl-tRNA hydrolase J8L76_02770 PF01386 Ribosomal L25p family J8L76_02770 PF14693 Ribosomal protein TL5, C-terminal domain J8L76_02775 PF14572 Phosphoribosyl synthetase-associated domain J8L76_02775 PF13793 N-terminal domain of ribose phosphate pyrophosphokinase J8L76_02790 PF08544 GHMP kinases C terminal J8L76_02790 PF00288 GHMP kinases N terminal domain J8L76_02795 PF03550 Outer membrane lipoprotein LolB J8L76_02805 PF06831 Formamidopyrimidine-DNA glycosylase H2TH domain J8L76_02805 PF06827 Zinc finger found in FPG and IleRS J8L76_02805 PF01149 Formamidopyrimidine-DNA glycosylase N-terminal domain J8L76_02810 PF00350 Dynamin family J8L76_02815 PF00037 4Fe-4S binding domain J8L76_02820 PF01467 Cytidylyltransferase-like J8L76_02830 PF00675 Insulinase (Peptidase family M16) J8L76_02830 PF05193 Peptidase M16 inactive domain J8L76_02835 PF00675 Insulinase (Peptidase family M16) J8L76_02835 PF05193 Peptidase M16 inactive domain J8L76_02840 PF00448 SRP54-type protein, GTPase domain J8L76_02840 PF02881 SRP54-type protein, helical bundle domain J8L76_02845 PF00005 ABC transporter J8L76_02850 PF02687 FtsX-like permease family J8L76_02850 PF18075 FtsX extracellular domain J8L76_02855 PF00990 Diguanylate cyclase, GGDEF domain J8L76_02855 PF03707 Bacterial signalling protein N terminal repeat J8L76_02855 PF00563 EAL domain J8L76_02860 PF01584 CheW-like domain J8L76_02865 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain J8L76_02865 PF02203 Tar ligand binding domain homologue J8L76_02865 PF00672 HAMP domain J8L76_02870 PF01584 CheW-like domain J8L76_02870 PF09078 CheY binding J8L76_02870 PF02895 Signal transducing histidine kinase, homodimeric domain J8L76_02870 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase J8L76_02870 PF01627 Hpt domain J8L76_02880 PF00072 Response regulator receiver domain J8L76_02885 PF02743 Cache domain J8L76_02885 PF00672 HAMP domain J8L76_02885 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain J8L76_02890 PF00072 Response regulator receiver domain J8L76_02890 PF00196 Bacterial regulatory proteins, luxR family J8L76_02895 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase J8L76_02895 PF07730 Histidine kinase J8L76_02905 PF00672 HAMP domain J8L76_02905 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase J8L76_02905 PF00512 His Kinase A (phospho-acceptor) domain J8L76_02905 PF01627 Hpt domain J8L76_02905 PF00072 Response regulator receiver domain J8L76_02905 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) J8L76_02920 PF01225 Mur ligase family, catalytic domain J8L76_02920 PF02875 Mur ligase family, glutamate ligase domain J8L76_02920 PF08245 Mur ligase middle domain J8L76_02930 PF00578 AhpC/TSA family J8L76_02935 PF01220 Dehydroquinase class II J8L76_02940 PF00364 Biotin-requiring enzyme J8L76_02945 PF02785 Biotin carboxylase C-terminal domain J8L76_02945 PF00289 Biotin carboxylase, N-terminal domain J8L76_02945 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain J8L76_02960 PF01219 Prokaryotic diacylglycerol kinase J8L76_02965 PF13439 Glycosyltransferase Family 4 J8L76_02965 PF00534 Glycosyl transferases group 1 J8L76_02970 PF00691 OmpA family J8L76_02980 PF00294 pfkB family carbohydrate kinase J8L76_02995 PF01553 Acyltransferase J8L76_03000 PF00149 Calcineurin-like phosphoesterase J8L76_03005 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain J8L76_03005 PF00476 DNA polymerase family A J8L76_03005 PF01612 3'-5' exonuclease J8L76_03005 PF01367 5'-3' exonuclease, C-terminal SAM fold J8L76_03010 PF03641 Possible lysine decarboxylase J8L76_03020 PF01636 Phosphotransferase enzyme family J8L76_03035 PF01467 Cytidylyltransferase-like J8L76_03045 PF02590 Predicted SPOUT methyltransferase J8L76_03050 PF02545 Maf-like protein J8L76_03060 PF01136 Peptidase family U32 J8L76_03060 PF16325 Peptidase family U32 C-terminal domain J8L76_03065 PF00575 S1 RNA binding domain J8L76_03065 PF10150 Ribonuclease E/G family J8L76_03075 PF01738 Dienelactone hydrolase family J8L76_03080 PF00171 Aldehyde dehydrogenase family J8L76_03085 PF00877 NlpC/P60 family J8L76_03095 PF00563 EAL domain J8L76_03095 PF08668 HDOD domain J8L76_03100 PF00571 CBS domain J8L76_03100 PF03448 MgtE intracellular N domain J8L76_03100 PF01769 Divalent cation transporter J8L76_03105 PF00912 Transglycosylase J8L76_03110 PF18317 Shikimate 5'-dehydrogenase C-terminal domain J8L76_03110 PF08501 Shikimate dehydrogenase substrate binding domain J8L76_03110 PF01488 Shikimate / quinate 5-dehydrogenase J8L76_03115 PF03544 Gram-negative bacterial TonB protein C-terminal J8L76_03120 PF00773 RNB domain J8L76_03125 PF05728 Uncharacterised protein family (UPF0227) J8L76_03135 PF02673 Bacitracin resistance protein BacA J8L76_03140 PF00654 Voltage gated chloride channel J8L76_03145 PF00724 NADH:flavin oxidoreductase / NADH oxidase family J8L76_03165 PF01053 Cys/Met metabolism PLP-dependent enzyme J8L76_03185 PF03692 Putative zinc- or iron-chelating domain J8L76_03190 PF00881 Nitroreductase family J8L76_03195 PF03894 D-xylulose 5-phosphate/D-fructose 6-phosphate phosphoketolase J8L76_03195 PF09363 XFP C-terminal domain J8L76_03195 PF09364 XFP N-terminal domain J8L76_03200 PF13667 ThiC-associated domain J8L76_03200 PF01964 Radical SAM ThiC family J8L76_03205 PF00194 Eukaryotic-type carbonic anhydrase J8L76_03220 PF02321 Outer membrane efflux protein J8L76_03225 PF00534 Glycosyl transferases group 1 J8L76_03225 PF04413 3-Deoxy-D-manno-octulosonic-acid transferase (kdotransferase) J8L76_03230 PF01075 Glycosyltransferase family 9 (heptosyltransferase) J8L76_03235 PF00535 Glycosyl transferase family 2 J8L76_03240 PF01370 NAD dependent epimerase/dehydratase family J8L76_03245 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain J8L76_03245 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain J8L76_03245 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain J8L76_03250 PF16363 GDP-mannose 4,6 dehydratase J8L76_03255 PF01061 ABC-2 type transporter J8L76_03260 PF00005 ABC transporter J8L76_03280 PF01370 NAD dependent epimerase/dehydratase family J8L76_03285 PF13580 SIS domain J8L76_03290 PF01757 Acyltransferase family J8L76_03305 PF01757 Acyltransferase family J8L76_03315 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family J8L76_03320 PF02397 Bacterial sugar transferase J8L76_03325 PF02719 Polysaccharide biosynthesis protein J8L76_03355 PF00535 Glycosyl transferase family 2 J8L76_03360 PF01522 Polysaccharide deacetylase J8L76_03370 PF17103 Stealth protein CR4, conserved region 4 J8L76_03370 PF00534 Glycosyl transferases group 1 J8L76_03370 PF17101 Stealth protein CR1, conserved region 1 J8L76_03370 PF11380 Stealth protein CR2, conserved region 2 J8L76_03370 PF17102 Stealth protein CR3, conserved region 3 J8L76_03380 PF00005 ABC transporter J8L76_03380 PF00664 ABC transporter transmembrane region J8L76_03385 PF00534 Glycosyl transferases group 1 J8L76_03385 PF13439 Glycosyltransferase Family 4 J8L76_03390 PF01075 Glycosyltransferase family 9 (heptosyltransferase) J8L76_03400 PF02654 Cobalamin-5-phosphate synthase J8L76_03405 PF02277 Phosphoribosyltransferase J8L76_03410 PF02283 Cobinamide kinase / cobinamide phosphate guanyltransferase J8L76_03415 PF07685 CobB/CobQ-like glutamine amidotransferase domain J8L76_03420 PF17113 Regulatory signalling modulator protein AmpE J8L76_03420 PF03186 CobD/Cbib protein J8L76_03425 PF00155 Aminotransferase class I and II J8L76_03430 PF01497 Periplasmic binding protein J8L76_03440 PF06779 Uncharacterised MFS-type transporter YbfB J8L76_03450 PF01810 LysE type translocator J8L76_03455 PF03783 Curli production assembly/transport component CsgG J8L76_03465 PF05643 Putative bacterial lipoprotein (DUF799) J8L76_03480 PF07690 Major Facilitator Superfamily J8L76_03485 PF07963 Prokaryotic N-terminal methylation motif J8L76_03495 PF03880 DbpA RNA binding domain J8L76_03495 PF00270 DEAD/DEAH box helicase J8L76_03495 PF00271 Helicase conserved C-terminal domain J8L76_03510 PF12848 ABC transporter J8L76_03510 PF00005 ABC transporter J8L76_03520 PF02624 YcaO cyclodehydratase, ATP-ad Mg2+-binding J8L76_03520 PF18381 YcaO cyclodehydratase C-terminal domain J8L76_03525 PF01914 MarC family integral membrane protein J8L76_03530 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family J8L76_03530 PF03466 LysR substrate binding domain J8L76_03535 PF08267 Cobalamin-independent synthase, N-terminal domain J8L76_03535 PF01717 Cobalamin-independent synthase, Catalytic domain J8L76_03540 PF00547 Urease, gamma subunit J8L76_03545 PF00699 Urease beta subunit J8L76_03550 PF01979 Amidohydrolase family J8L76_03550 PF00449 Urease alpha-subunit, N-terminal domain J8L76_03555 PF06114 IrrE N-terminal-like domain J8L76_03555 PF01381 Helix-turn-helix J8L76_03555 PF09856 Predicted transcriptional regulator (DUF2083) J8L76_03560 PF07729 FCD domain J8L76_03560 PF00392 Bacterial regulatory proteins, gntR family J8L76_03565 PF03477 ATP cone domain J8L76_03565 PF02867 Ribonucleotide reductase, barrel domain J8L76_03565 PF00317 Ribonucleotide reductase, all-alpha domain J8L76_03570 PF00268 Ribonucleotide reductase, small chain J8L76_03580 PF05985 Ethanolamine ammonia-lyase light chain (EutC) J8L76_03585 PF06751 Ethanolamine ammonia lyase large subunit (EutB) J8L76_03595 PF12833 Helix-turn-helix domain J8L76_03600 PF00072 Response regulator receiver domain J8L76_03615 PF02463 RecF/RecN/SMC N terminal domain J8L76_03620 PF07685 CobB/CobQ-like glutamine amidotransferase domain J8L76_03620 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain J8L76_03625 PF02572 ATP:corrinoid adenosyltransferase BtuR/CobO/CobP J8L76_03625 PF12557 Cob(I)alamin adenosyltransferase N terminal J8L76_03635 PF00005 ABC transporter J8L76_03640 PF01032 FecCD transport family J8L76_03645 PF00593 TonB dependent receptor J8L76_03645 PF07715 TonB-dependent Receptor Plug Domain J8L76_03655 PF05164 Cell division protein ZapA J8L76_03665 PF01925 Sulfite exporter TauE/SafE J8L76_03670 PF00920 Dehydratase family J8L76_03675 PF12729 Four helix bundle sensory module for signal transduction J8L76_03675 PF00672 HAMP domain J8L76_03675 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain J8L76_03680 PF01790 Prolipoprotein diacylglyceryl transferase J8L76_03700 PF05872 Bacterial protein of unknown function (DUF853) J8L76_03705 PF01709 Transcriptional regulator J8L76_03710 PF02075 Crossover junction endodeoxyribonuclease RuvC J8L76_03720 PF01330 RuvA N terminal domain J8L76_03720 PF07499 RuvA, C-terminal domain J8L76_03725 PF05491 RuvB C-terminal winged helix domain J8L76_03725 PF05496 Holliday junction DNA helicase RuvB P-loop domain J8L76_03725 PF17864 RuvB AAA lid domain J8L76_03730 PF03061 Thioesterase superfamily J8L76_03735 PF01618 MotA/TolQ/ExbB proton channel family J8L76_03740 PF02472 Biopolymer transport protein ExbD/TolR J8L76_03750 PF07676 WD40-like Beta Propeller Repeat J8L76_03750 PF04052 TolB amino-terminal domain J8L76_03755 PF00691 OmpA family J8L76_03765 PF04055 Radical SAM superfamily J8L76_03770 PF07238 PilZ domain J8L76_03775 PF06508 Queuosine biosynthesis protein QueC J8L76_03790 PF01515 Phosphate acetyl/butaryl transferase J8L76_03790 PF03949 Malic enzyme, NAD binding domain J8L76_03790 PF00390 Malic enzyme, N-terminal domain J8L76_03795 PF03544 Gram-negative bacterial TonB protein C-terminal J8L76_03805 PF03824 High-affinity nickel-transport protein J8L76_03810 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase J8L76_03810 PF02743 Cache domain J8L76_03810 PF00512 His Kinase A (phospho-acceptor) domain J8L76_03815 PF08753 NikR C terminal nickel binding domain J8L76_03815 PF01402 Ribbon-helix-helix protein, copG family J8L76_03820 PF01435 Peptidase family M48 J8L76_03830 PF03466 LysR substrate binding domain J8L76_03830 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family J8L76_03835 PF00072 Response regulator receiver domain J8L76_03835 PF00158 Sigma-54 interaction domain J8L76_03835 PF02954 Bacterial regulatory protein, Fis family J8L76_03840 PF07804 HipA-like C-terminal domain J8L76_03845 PF00374 Nickel-dependent hydrogenase J8L76_03850 PF14720 NiFe/NiFeSe hydrogenase small subunit C-terminal J8L76_03850 PF01058 NADH ubiquinone oxidoreductase, 20 Kd subunit J8L76_03855 PF02954 Bacterial regulatory protein, Fis family J8L76_03855 PF00072 Response regulator receiver domain J8L76_03855 PF00158 Sigma-54 interaction domain J8L76_03865 PF00586 AIR synthase related protein, N-terminal domain J8L76_03865 PF02769 AIR synthase related protein, C-terminal domain J8L76_03880 PF01924 Hydrogenase formation hypA family J8L76_03885 PF01455 HupF/HypC family J8L76_03895 PF00708 Acylphosphatase J8L76_03895 PF17788 HypF Kae1-like domain J8L76_03895 PF01300 Telomere recombination J8L76_03895 PF07503 HypF finger J8L76_03900 PF02492 CobW/HypB/UreG, nucleotide-binding domain J8L76_03905 PF01155 Hydrogenase/urease nickel incorporation, metallochaperone, hypA J8L76_03915 PF08241 Methyltransferase domain J8L76_03920 PF00005 ABC transporter J8L76_03925 PF03379 CcmB protein J8L76_03930 PF01578 Cytochrome C assembly protein J8L76_03940 PF03100 CcmE J8L76_03945 PF16327 Cytochrome c-type biogenesis protein CcmF C-terminal J8L76_03945 PF01578 Cytochrome C assembly protein J8L76_03950 PF08534 Redoxin J8L76_03955 PF03918 Cytochrome C biogenesis protein J8L76_03970 PF01026 TatD related DNase J8L76_03975 PF01266 FAD dependent oxidoreductase J8L76_03980 PF13291 ACT domain J8L76_03980 PF04607 Region found in RelA / SpoT proteins J8L76_03980 PF02824 TGS domain J8L76_03985 PF01192 RNA polymerase Rpb6 J8L76_03990 PF00625 Guanylate kinase J8L76_03995 PF03755 YicC-like family, N-terminal region J8L76_03995 PF08340 Domain of unknown function (DUF1732) J8L76_04000 PF03793 PASTA domain J8L76_04000 PF00069 Protein kinase domain J8L76_04010 PF03725 3' exoribonuclease family, domain 2 J8L76_04010 PF01138 3' exoribonuclease family, domain 1 J8L76_04015 PF01725 Ham1 family J8L76_04020 PF06969 HemN C-terminal domain J8L76_04020 PF04055 Radical SAM superfamily J8L76_04025 PF04493 Endonuclease V J8L76_04035 PF01161 Phosphatidylethanolamine-binding protein J8L76_04040 PF00561 alpha/beta hydrolase fold J8L76_04040 PF07167 Poly-beta-hydroxybutyrate polymerase (PhaC) N-terminus J8L76_04050 PF02803 Thiolase, C-terminal domain J8L76_04050 PF00108 Thiolase, N-terminal domain J8L76_04060 PF03641 Possible lysine decarboxylase J8L76_04065 PF00378 Enoyl-CoA hydratase/isomerase J8L76_04085 PF01546 Peptidase family M20/M25/M40 J8L76_04085 PF07687 Peptidase dimerisation domain J8L76_04090 PF03668 P-loop ATPase protein family J8L76_04105 PF02441 Flavoprotein J8L76_04120 PF11873 Membrane-bound lytic murein transglycosylase C, N-terminal domain J8L76_04120 PF01464 Transglycosylase SLT domain J8L76_04130 PF00633 Helix-hairpin-helix motif J8L76_04130 PF00730 HhH-GPD superfamily base excision DNA repair protein J8L76_04130 PF14815 NUDIX domain J8L76_04135 PF01370 NAD dependent epimerase/dehydratase family J8L76_04135 PF02222 ATP-grasp domain J8L76_04140 PF01613 Flavin reductase like domain J8L76_04150 PF03976 Polyphosphate kinase 2 (PPK2) J8L76_04165 PF05690 Thiazole biosynthesis protein ThiG J8L76_04175 PF02390 Putative methyltransferase J8L76_04180 PF02036 SCP-2 sterol transfer family J8L76_04185 PF01136 Peptidase family U32 J8L76_04190 PF01136 Peptidase family U32 J8L76_04195 PF01925 Sulfite exporter TauE/SafE J8L76_04200 PF00106 short chain dehydrogenase J8L76_04205 PF00085 Thioredoxin J8L76_04205 PF01323 DSBA-like thioredoxin domain J8L76_04215 PF03485 Arginyl tRNA synthetase N terminal domain J8L76_04215 PF05746 DALR anticodon binding domain J8L76_04215 PF00750 tRNA synthetases class I (R) J8L76_04220 PF03109 ABC1 family J8L76_04225 PF07690 Major Facilitator Superfamily J8L76_04230 PF03358 NADPH-dependent FMN reductase J8L76_04235 PF00925 GTP cyclohydrolase II J8L76_04240 PF02683 Cytochrome C biogenesis protein transmembrane region J8L76_04240 PF11412 Disulphide bond corrector protein DsbC J8L76_04270 PF00005 ABC transporter J8L76_04275 PF01061 ABC-2 type transporter J8L76_04280 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain J8L76_04280 PF13426 PAS domain J8L76_04280 PF08447 PAS fold J8L76_04285 PF00491 Arginase family J8L76_04290 PF00677 Lumazine binding domain J8L76_04295 PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase J8L76_04295 PF00925 GTP cyclohydrolase II J8L76_04300 PF00885 6,7-dimethyl-8-ribityllumazine synthase J8L76_04305 PF01029 NusB family J8L76_04310 PF02769 AIR synthase related protein, C-terminal domain J8L76_04310 PF00586 AIR synthase related protein, N-terminal domain J8L76_04315 PF04608 Phosphatidylglycerophosphatase A J8L76_04320 PF02464 Competence-damaged protein J8L76_04325 PF00210 Ferritin-like domain J8L76_04335 PF00154 recA bacterial DNA recombination protein J8L76_04340 PF02631 RecX family J8L76_04345 PF00005 ABC transporter J8L76_04350 PF04963 Sigma-54 factor, core binding domain J8L76_04350 PF00309 Sigma-54 factor, Activator interacting domain (AID) J8L76_04350 PF04552 Sigma-54, DNA binding domain J8L76_04355 PF02482 Sigma 54 modulation protein / S30EA ribosomal protein J8L76_04360 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 J8L76_04365 PF07475 HPr Serine kinase C-terminal domain J8L76_04365 PF02603 HPr Serine kinase N terminus J8L76_04380 PF01171 PP-loop family J8L76_04410 PF00043 Glutathione S-transferase, C-terminal domain J8L76_04410 PF02798 Glutathione S-transferase, N-terminal domain J8L76_04420 PF10417 C-terminal domain of 1-Cys peroxiredoxin J8L76_04420 PF00578 AhpC/TSA family J8L76_04425 PF13192 Thioredoxin domain J8L76_04425 PF07992 Pyridine nucleotide-disulphide oxidoreductase J8L76_04435 PF03466 LysR substrate binding domain J8L76_04435 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family J8L76_04440 PF02525 Flavodoxin-like fold J8L76_04445 PF02678 Pirin J8L76_04445 PF05726 Pirin C-terminal cupin domain J8L76_04495 PF10106 Uncharacterized protein conserved in bacteria (DUF2345) J8L76_04495 PF04717 Type VI secretion system, phage-baseplate injector J8L76_04495 PF13296 Putative type VI secretion system Rhs element Vgr J8L76_04505 PF12627 Probable RNA and SrmB- binding site of polymerase A J8L76_04505 PF01966 HD domain J8L76_04505 PF01743 Poly A polymerase head domain J8L76_04520 PF14718 Soluble lytic murein transglycosylase L domain J8L76_04520 PF01464 Transglycosylase SLT domain J8L76_04525 PF01812 5-formyltetrahydrofolate cyclo-ligase family J8L76_04535 PF07715 TonB-dependent Receptor Plug Domain J8L76_04535 PF07660 Secretin and TonB N terminus short domain J8L76_04535 PF00593 TonB dependent receptor J8L76_04540 PF00291 Pyridoxal-phosphate dependent enzyme J8L76_04540 PF00585 C-terminal regulatory domain of Threonine dehydratase J8L76_04550 PF01894 Uncharacterised protein family UPF0047 J8L76_04565 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase J8L76_04565 PF00512 His Kinase A (phospho-acceptor) domain J8L76_04565 PF00989 PAS fold J8L76_04565 PF11808 Phosphate regulon sensor protein PhoR J8L76_04570 PF00072 Response regulator receiver domain J8L76_04570 PF00486 Transcriptional regulatory protein, C terminal J8L76_04580 PF01209 ubiE/COQ5 methyltransferase family J8L76_04595 PF00401 ATP synthase, Delta/Epsilon chain, long alpha-helix domain J8L76_04595 PF02823 ATP synthase, Delta/Epsilon chain, beta-sandwich domain J8L76_04600 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain J8L76_04600 PF02874 ATP synthase alpha/beta family, beta-barrel domain J8L76_04605 PF00231 ATP synthase J8L76_04610 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain J8L76_04610 PF00306 ATP synthase alpha/beta chain, C terminal domain J8L76_04610 PF02874 ATP synthase alpha/beta family, beta-barrel domain J8L76_04615 PF00213 ATP synthase delta (OSCP) subunit J8L76_04620 PF00430 ATP synthase B/B' CF(0) J8L76_04625 PF00137 ATP synthase subunit C J8L76_04630 PF00119 ATP synthase A chain J8L76_04640 PF17762 HTH domain found in ParB protein J8L76_04640 PF02195 ParB-like nuclease domain J8L76_04645 PF13614 AAA domain J8L76_04650 PF02527 rRNA small subunit methyltransferase G J8L76_04655 PF01134 Glucose inhibited division protein A J8L76_04655 PF13932 GidA associated domain J8L76_04665 PF01925 Sulfite exporter TauE/SafE J8L76_04675 PF00004 ATPase family associated with various cellular activities (AAA) J8L76_04675 PF05362 Lon protease (S16) C-terminal proteolytic domain J8L76_04685 PF01926 50S ribosome-binding GTPase J8L76_04685 PF12631 MnmE helical domain J8L76_04685 PF10396 GTP-binding protein TrmE N-terminus J8L76_04690 PF02096 60Kd inner membrane protein J8L76_04690 PF14849 YidC periplasmic domain J8L76_04695 PF01809 Putative membrane protein insertion efficiency factor J8L76_04700 PF00825 Ribonuclease P J8L76_04705 PF00468 Ribosomal protein L34 J8L76_04710 PF08299 Bacterial dnaA protein helix-turn-helix J8L76_04710 PF00308 Bacterial dnaA protein J8L76_04710 PF11638 DnaA N-terminal domain J8L76_04715 PF00712 DNA polymerase III beta subunit, N-terminal domain J8L76_04715 PF02767 DNA polymerase III beta subunit, central domain J8L76_04715 PF02768 DNA polymerase III beta subunit, C-terminal domain J8L76_04720 PF01751 Toprim domain J8L76_04720 PF18053 DNA gyrase B subunit insert domain J8L76_04720 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase J8L76_04720 PF00204 DNA gyrase B J8L76_04720 PF00986 DNA gyrase B subunit, carboxyl terminus J8L76_04750 PF00303 Thymidylate synthase J8L76_04770 PF04185 Phosphoesterase family J8L76_04780 PF00155 Aminotransferase class I and II J8L76_04810 PF00849 RNA pseudouridylate synthase J8L76_04810 PF01479 S4 domain J8L76_04815 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family J8L76_04815 PF03466 LysR substrate binding domain J8L76_04820 PF02915 Rubrerythrin J8L76_04825 PF00301 Rubredoxin J8L76_04835 PF01131 DNA topoisomerase J8L76_04835 PF01751 Toprim domain J8L76_04840 PF04361 Protein of unknown function (DUF494) J8L76_04845 PF02481 DNA recombination-mediator protein A J8L76_04845 PF17782 DprA winged helix domain J8L76_04855 PF01327 Polypeptide deformylase J8L76_04860 PF00551 Formyl transferase J8L76_04860 PF02911 Formyl transferase, C-terminal domain J8L76_04875 PF13276 HTH-like domain J8L76_04875 PF00665 Integrase core domain J8L76_04875 PF13333 Integrase core domain J8L76_04880 PF00665 Integrase core domain J8L76_04880 PF13333 Integrase core domain J8L76_04900 PF07693 KAP family P-loop domain J8L76_04900 PF07693 KAP family P-loop domain J8L76_04930 PF00445 Ribonuclease T2 family J8L76_04945 PF10106 Uncharacterized protein conserved in bacteria (DUF2345) J8L76_04945 PF13296 Putative type VI secretion system Rhs element Vgr J8L76_04945 PF04717 Type VI secretion system, phage-baseplate injector J8L76_05000 PF01545 Cation efflux family J8L76_05000 PF16916 Dimerisation domain of Zinc Transporter J8L76_05005 PF01029 NusB family J8L76_05005 PF01189 16S rRNA methyltransferase RsmB/F J8L76_05015 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase J8L76_05015 PF00672 HAMP domain J8L76_05015 PF00989 PAS fold J8L76_05015 PF00512 His Kinase A (phospho-acceptor) domain J8L76_05020 PF02954 Bacterial regulatory protein, Fis family J8L76_05020 PF00072 Response regulator receiver domain J8L76_05020 PF00158 Sigma-54 interaction domain J8L76_05025 PF01208 Uroporphyrinogen decarboxylase (URO-D) J8L76_05030 PF00271 Helicase conserved C-terminal domain J8L76_05030 PF17764 3′ DNA-binding domain (3′BD) J8L76_05030 PF18319 PriA DNA helicase Cys-rich region (CRR) domain J8L76_05030 PF18074 Primosomal protein N C-terminal domain J8L76_05030 PF00270 DEAD/DEAH box helicase J8L76_05035 PF03475 3-alpha domain J8L76_05035 PF03473 MOSC domain J8L76_05040 PF00480 ROK family J8L76_05050 PF02550 Acetyl-CoA hydrolase/transferase N-terminal domain J8L76_05050 PF13336 Acetyl-CoA hydrolase/transferase C-terminal domain J8L76_05055 PF00484 Carbonic anhydrase J8L76_05080 PF01565 FAD binding domain J8L76_05080 PF02873 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain J8L76_05110 PF07075 Protein of unknown function (DUF1343) J8L76_05115 PF13847 Methyltransferase domain J8L76_05120 PF01118 Semialdehyde dehydrogenase, NAD binding domain J8L76_05130 PF02310 B12 binding domain J8L76_05130 PF02607 B12 binding domain J8L76_05130 PF02965 Vitamin B12 dependent methionine synthase, activation domain J8L76_05130 PF00809 Pterin binding enzyme J8L76_05130 PF02574 Homocysteine S-methyltransferase J8L76_05140 PF00072 Response regulator receiver domain J8L76_05145 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) J8L76_05145 PF00072 Response regulator receiver domain J8L76_05145 PF01627 Hpt domain J8L76_05145 PF00512 His Kinase A (phospho-acceptor) domain J8L76_05145 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase J8L76_05145 PF00672 HAMP domain J8L76_05150 PF07690 Major Facilitator Superfamily J8L76_05155 PF13335 Magnesium chelatase, subunit ChlI C-terminal J8L76_05155 PF01078 Magnesium chelatase, subunit ChlI J8L76_05160 PF04380 Membrane fusogenic activity J8L76_05170 PF00543 Nitrogen regulatory protein P-II J8L76_05175 PF00909 Ammonium Transporter Family J8L76_05190 PF00551 Formyl transferase J8L76_05195 PF01266 FAD dependent oxidoreductase J8L76_05205 PF08669 Glycine cleavage T-protein C-terminal barrel domain J8L76_05205 PF07992 Pyridine nucleotide-disulphide oxidoreductase J8L76_05205 PF17806 Sarcosine oxidase A3 domain J8L76_05205 PF01571 Aminomethyltransferase folate-binding domain J8L76_05215 PF00120 Glutamine synthetase, catalytic domain J8L76_05230 PF01645 Conserved region in glutamate synthase J8L76_05235 PF00763 Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain J8L76_05235 PF02882 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain J8L76_05240 PF00543 Nitrogen regulatory protein P-II J8L76_05245 PF00909 Ammonium Transporter Family J8L76_05255 PF01176 Translation initiation factor 1A / IF-1 J8L76_05260 PF00034 Cytochrome c J8L76_05265 PF13442 Cytochrome C oxidase, cbb3-type, subunit III J8L76_05280 PF00266 Aminotransferase class-V J8L76_05290 PF01842 ACT domain J8L76_05290 PF00551 Formyl transferase J8L76_05300 PF12848 ABC transporter J8L76_05300 PF00005 ABC transporter J8L76_05305 PF11871 Domain of unknown function (DUF3391) J8L76_05305 PF01966 HD domain J8L76_05320 PF00893 Small Multidrug Resistance protein J8L76_05325 PF00005 ABC transporter J8L76_05325 PF12848 ABC transporter J8L76_05340 PF02955 Prokaryotic glutathione synthetase, ATP-grasp domain J8L76_05340 PF02951 Prokaryotic glutathione synthetase, N-terminal domain J8L76_05345 PF02424 ApbE family J8L76_05355 PF00381 PTS HPr component phosphorylation site J8L76_05360 PF02896 PEP-utilising enzyme, TIM barrel domain J8L76_05360 PF00391 PEP-utilising enzyme, mobile domain J8L76_05360 PF05524 PEP-utilising enzyme, N-terminal J8L76_05365 PF00561 alpha/beta hydrolase fold J8L76_05370 PF00561 alpha/beta hydrolase fold J8L76_05370 PF07021 Methionine biosynthesis protein MetW J8L76_05375 PF07690 Major Facilitator Superfamily J8L76_05415 PF03372 Endonuclease/Exonuclease/phosphatase family J8L76_05420 PF00156 Phosphoribosyl transferase domain J8L76_05440 PF02637 GatB domain J8L76_05440 PF02934 GatB/GatE catalytic domain J8L76_05450 PF01425 Amidase J8L76_05455 PF02686 Glu-tRNAGln amidotransferase C subunit J8L76_05465 PF04085 rod shape-determining protein MreC J8L76_05475 PF00905 Penicillin binding protein transpeptidase domain J8L76_05475 PF03717 Penicillin-binding Protein dimerisation domain J8L76_05480 PF01098 Cell cycle protein J8L76_05485 PF05036 Sporulation related domain J8L76_05485 PF03330 Lytic transglycolase J8L76_05495 PF00543 Nitrogen regulatory protein P-II J8L76_05500 PF00873 AcrB/AcrD/AcrF family J8L76_05505 PF13533 Biotin-lipoyl like J8L76_05510 PF02321 Outer membrane efflux protein J8L76_05515 PF07943 Penicillin-binding protein 5, C-terminal domain J8L76_05515 PF00768 D-alanyl-D-alanine carboxypeptidase J8L76_05520 PF01063 Amino-transferase class IV J8L76_05525 PF04359 Protein of unknown function (DUF493) J8L76_05530 PF03099 Biotin/lipoate A/B protein ligase family J8L76_05535 PF04055 Radical SAM superfamily J8L76_05545 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family J8L76_05545 PF03466 LysR substrate binding domain J8L76_05550 PF00465 Iron-containing alcohol dehydrogenase J8L76_05560 PF00248 Aldo/keto reductase family J8L76_05565 PF00248 Aldo/keto reductase family J8L76_05570 PF07690 Major Facilitator Superfamily J8L76_05635 PF09299 Mu transposase, C-terminal J8L76_05635 PF00665 Integrase core domain J8L76_05645 PF00561 alpha/beta hydrolase fold J8L76_05650 PF02803 Thiolase, C-terminal domain J8L76_05650 PF00108 Thiolase, N-terminal domain J8L76_05675 PF11614 IG-like fold at C-terminal of FixG, putative oxidoreductase J8L76_05675 PF13746 4Fe-4S dicluster domain J8L76_05675 PF12801 4Fe-4S binding domain J8L76_05680 PF00753 Metallo-beta-lactamase superfamily J8L76_05680 PF04273 Putative phosphatase (DUF442) J8L76_05685 PF02954 Bacterial regulatory protein, Fis family J8L76_05685 PF00158 Sigma-54 interaction domain J8L76_05685 PF00072 Response regulator receiver domain J8L76_05700 PF13361 UvrD-like helicase C-terminal domain J8L76_05700 PF00580 UvrD/REP helicase N-terminal domain J8L76_05710 PF13442 Cytochrome C oxidase, cbb3-type, subunit III J8L76_05745 PF01590 GAF domain J8L76_05745 PF02954 Bacterial regulatory protein, Fis family J8L76_05745 PF00158 Sigma-54 interaction domain J8L76_05750 PF03960 ArsC family J8L76_05760 PF04055 Radical SAM superfamily J8L76_05760 PF02579 Dinitrogenase iron-molybdenum cofactor J8L76_05765 PF00037 4Fe-4S binding domain J8L76_05795 PF12843 Putative quorum-sensing-regulated virulence factor J8L76_05800 PF04344 Chemotaxis phosphatase, CheZ J8L76_05805 PF03747 ADP-ribosylglycohydrolase J8L76_05810 PF07357 Dinitrogenase reductase ADP-ribosyltransferase (DRAT) J8L76_05815 PF00142 4Fe-4S iron sulfur cluster binding proteins, NifH/frxC family J8L76_05820 PF00148 Nitrogenase component 1 type Oxidoreductase J8L76_05825 PF11844 Domain of unknown function (DUF3364) J8L76_05825 PF00148 Nitrogenase component 1 type Oxidoreductase J8L76_05830 PF00111 2Fe-2S iron-sulfur cluster binding domain J8L76_05835 PF00148 Nitrogenase component 1 type Oxidoreductase J8L76_05835 PF04324 BFD-like [2Fe-2S] binding domain J8L76_05840 PF00148 Nitrogenase component 1 type Oxidoreductase J8L76_05845 PF02579 Dinitrogenase iron-molybdenum cofactor J8L76_05850 PF03270 Protein of unknown function, DUF269 J8L76_05855 PF05082 Rop-like J8L76_05865 PF12838 4Fe-4S dicluster domain J8L76_05870 PF04891 NifQ J8L76_05875 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family J8L76_05875 PF03459 TOBE domain J8L76_05880 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family J8L76_05880 PF03459 TOBE domain J8L76_05890 PF00528 Binding-protein-dependent transport system inner membrane component J8L76_05895 PF00005 ABC transporter J8L76_05895 PF03459 TOBE domain J8L76_05905 PF01729 Quinolinate phosphoribosyl transferase, C-terminal domain J8L76_05905 PF02749 Quinolinate phosphoribosyl transferase, N-terminal domain J8L76_05915 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family J8L76_05915 PF03459 TOBE domain J8L76_05920 PF00593 TonB dependent receptor J8L76_05920 PF07715 TonB-dependent Receptor Plug Domain J8L76_05955 PF07992 Pyridine nucleotide-disulphide oxidoreductase J8L76_05960 PF01012 Electron transfer flavoprotein domain J8L76_05960 PF00766 Electron transfer flavoprotein FAD-binding domain J8L76_05965 PF01012 Electron transfer flavoprotein domain J8L76_05970 PF03206 Nitrogen fixation protein NifW J8L76_05975 PF00682 HMGL-like J8L76_05980 PF00202 Aminotransferase class-III J8L76_05985 PF02581 Thiamine monophosphate synthase J8L76_05990 PF08543 Phosphomethylpyrimidine kinase J8L76_05995 PF00072 Response regulator receiver domain J8L76_06000 PF00072 Response regulator receiver domain J8L76_06010 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain J8L76_06010 PF13675 Type IV pili methyl-accepting chemotaxis transducer N-term J8L76_06015 PF01584 CheW-like domain J8L76_06015 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase J8L76_06015 PF01627 Hpt domain J8L76_06015 PF00072 Response regulator receiver domain J8L76_06015 PF02895 Signal transducing histidine kinase, homodimeric domain J8L76_06020 PF00875 DNA photolyase J8L76_06020 PF03441 FAD binding domain of DNA photolyase J8L76_06025 PF02622 Uncharacterized ACR, COG1678 J8L76_06030 PF03652 Holliday junction resolvase J8L76_06035 PF00156 Phosphoribosyl transferase domain J8L76_06040 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain J8L76_06040 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain J8L76_06045 PF01979 Amidohydrolase family J8L76_06055 PF04397 LytTr DNA-binding domain J8L76_06060 PF02594 Uncharacterised ACR, YggU family COG1872 J8L76_06065 PF02325 YGGT family J8L76_06070 PF14748 Pyrroline-5-carboxylate reductase dimerisation J8L76_06070 PF03807 NADP oxidoreductase coenzyme F420-dependent J8L76_06075 PF01168 Alanine racemase, N-terminal domain J8L76_06080 PF00437 Type II/IV secretion system protein J8L76_06085 PF00437 Type II/IV secretion system protein J8L76_06095 PF01569 PAP2 superfamily J8L76_06100 PF01170 Putative RNA methylase family UPF0020 J8L76_06100 PF02926 THUMP domain J8L76_06105 PF03653 Uncharacterised protein family (UPF0093) J8L76_06115 PF00175 Oxidoreductase NAD-binding domain J8L76_06115 PF00970 Oxidoreductase FAD-binding domain J8L76_06115 PF00111 2Fe-2S iron-sulfur cluster binding domain J8L76_06120 PF08668 HDOD domain J8L76_06120 PF00563 EAL domain J8L76_06125 PF00005 ABC transporter J8L76_06130 PF12399 Branched-chain amino acid ATP-binding cassette transporter J8L76_06130 PF00005 ABC transporter J8L76_06135 PF02653 Branched-chain amino acid transport system / permease component J8L76_06135 PF11862 Domain of unknown function (DUF3382) J8L76_06140 PF02653 Branched-chain amino acid transport system / permease component J8L76_06145 PF13458 Periplasmic binding protein J8L76_06150 PF00034 Cytochrome c J8L76_06155 PF03190 Protein of unknown function, DUF255 J8L76_06160 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family J8L76_06160 PF03466 LysR substrate binding domain J8L76_06180 PF02219 Methylenetetrahydrofolate reductase J8L76_06185 PF05221 S-adenosyl-L-homocysteine hydrolase J8L76_06185 PF00670 S-adenosyl-L-homocysteine hydrolase, NAD binding domain J8L76_06190 PF17200 Single Cache domain 2 J8L76_06190 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain J8L76_06190 PF00672 HAMP domain J8L76_06195 PF13193 AMP-binding enzyme C-terminal domain J8L76_06195 PF00501 AMP-binding enzyme J8L76_06200 PF02773 S-adenosylmethionine synthetase, C-terminal domain J8L76_06200 PF02772 S-adenosylmethionine synthetase, central domain J8L76_06200 PF00438 S-adenosylmethionine synthetase, N-terminal domain J8L76_06215 PF00583 Acetyltransferase (GNAT) family J8L76_06220 PF01678 Diaminopimelate epimerase J8L76_06230 PF00589 Phage integrase family J8L76_06230 PF02899 Phage integrase, N-terminal SAM-like domain J8L76_06240 PF17785 PUA-like domain J8L76_06240 PF10672 S-adenosylmethionine-dependent methyltransferase J8L76_06250 PF00227 Proteasome subunit J8L76_06255 PF07724 AAA domain (Cdc48 subfamily) J8L76_06255 PF00004 ATPase family associated with various cellular activities (AAA) J8L76_06260 PF01479 S4 domain J8L76_06265 PF00043 Glutathione S-transferase, C-terminal domain J8L76_06265 PF02798 Glutathione S-transferase, N-terminal domain J8L76_06270 PF00072 Response regulator receiver domain J8L76_06275 PF00512 His Kinase A (phospho-acceptor) domain J8L76_06275 PF00989 PAS fold J8L76_06275 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase J8L76_06280 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain J8L76_06280 PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain J8L76_06290 PF01491 Frataxin-like domain J8L76_06295 PF02635 DsrE/DsrF-like family J8L76_06300 PF00905 Penicillin binding protein transpeptidase domain J8L76_06300 PF00912 Transglycosylase J8L76_06300 PF17092 Penicillin-binding protein OB-like domain J8L76_06305 PF11104 Type IV pilus assembly protein PilM; J8L76_06310 PF05137 Fimbrial assembly protein (PilN) J8L76_06325 PF11741 AMIN domain J8L76_06325 PF00263 Bacterial type II and III secretion system protein J8L76_06325 PF07660 Secretin and TonB N terminus short domain J8L76_06325 PF03958 Bacterial type II/III secretion system short domain J8L76_06330 PF01202 Shikimate kinase J8L76_06335 PF01761 3-dehydroquinate synthase J8L76_06340 PF01966 HD domain J8L76_06340 PF13286 Phosphohydrolase-associated domain J8L76_06345 PF01645 Conserved region in glutamate synthase J8L76_06345 PF00310 Glutamine amidotransferases class-II J8L76_06345 PF04898 Glutamate synthase central domain J8L76_06345 PF01493 GXGXG motif J8L76_06350 PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster J8L76_06350 PF07992 Pyridine nucleotide-disulphide oxidoreductase J8L76_06360 PF00132 Bacterial transferase hexapeptide (six repeats) J8L76_06360 PF12804 MobA-like NTP transferase domain J8L76_06370 PF01380 SIS domain J8L76_06395 PF12833 Helix-turn-helix domain J8L76_06395 PF12625 Arabinose-binding domain of AraC transcription regulator, N-term J8L76_06400 PF01642 Methylmalonyl-CoA mutase J8L76_06400 PF02310 B12 binding domain J8L76_06405 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain J8L76_06405 PF08447 PAS fold J8L76_06405 PF13426 PAS domain J8L76_06420 PF00378 Enoyl-CoA hydratase/isomerase J8L76_06425 PF00392 Bacterial regulatory proteins, gntR family J8L76_06425 PF07729 FCD domain J8L76_06430 PF01642 Methylmalonyl-CoA mutase J8L76_06430 PF02310 B12 binding domain J8L76_06440 PF01039 Carboxyl transferase domain J8L76_06445 PF00289 Biotin carboxylase, N-terminal domain J8L76_06445 PF18140 Propionyl-coenzyme A carboxylase BT domain J8L76_06445 PF00364 Biotin-requiring enzyme J8L76_06445 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain J8L76_06445 PF02785 Biotin carboxylase C-terminal domain J8L76_06455 PF04545 Sigma-70, region 4 J8L76_06455 PF04542 Sigma-70 region 2 J8L76_06455 PF00140 Sigma-70 factor, region 1.2 J8L76_06465 PF08479 POTRA domain, ShlB-type J8L76_06465 PF17287 POTRA domain J8L76_06465 PF03865 Haemolysin secretion/activation protein ShlB/FhaC/HecB J8L76_06470 PF04829 Pre-toxin domain with VENN motif J8L76_06470 PF13332 Hemagglutinin repeat J8L76_06470 PF13018 Extended Signal Peptide of Type V secretion system J8L76_06470 PF05860 haemagglutination activity domain J8L76_06480 PF02913 FAD linked oxidases, C-terminal domain J8L76_06480 PF01565 FAD binding domain J8L76_06500 PF03144 Elongation factor Tu domain 2 J8L76_06500 PF03143 Elongation factor Tu C-terminal domain J8L76_06500 PF00009 Elongation factor Tu GTP binding domain J8L76_06510 PF00584 SecE/Sec61-gamma subunits of protein translocation complex J8L76_06515 PF00467 KOW motif J8L76_06515 PF02357 Transcription termination factor nusG J8L76_06520 PF00298 Ribosomal protein L11, RNA binding domain J8L76_06520 PF03946 Ribosomal protein L11, N-terminal domain J8L76_06525 PF00687 Ribosomal protein L1p/L10e family J8L76_06530 PF00466 Ribosomal protein L10 J8L76_06535 PF16320 Ribosomal protein L7/L12 dimerisation domain J8L76_06535 PF00542 Ribosomal protein L7/L12 C-terminal domain J8L76_06540 PF04563 RNA polymerase beta subunit J8L76_06540 PF04560 RNA polymerase Rpb2, domain 7 J8L76_06540 PF00562 RNA polymerase Rpb2, domain 6 J8L76_06540 PF10385 RNA polymerase beta subunit external 1 domain J8L76_06540 PF04565 RNA polymerase Rpb2, domain 3 J8L76_06540 PF04561 RNA polymerase Rpb2, domain 2 J8L76_06545 PF04998 RNA polymerase Rpb1, domain 5 J8L76_06545 PF05000 RNA polymerase Rpb1, domain 4 J8L76_06545 PF04983 RNA polymerase Rpb1, domain 3 J8L76_06545 PF00623 RNA polymerase Rpb1, domain 2 J8L76_06545 PF04997 RNA polymerase Rpb1, domain 1 J8L76_06550 PF00164 Ribosomal protein S12/S23 J8L76_06555 PF00177 Ribosomal protein S7p/S5e J8L76_06560 PF03764 Elongation factor G, domain IV J8L76_06560 PF03144 Elongation factor Tu domain 2 J8L76_06560 PF00679 Elongation factor G C-terminus J8L76_06560 PF14492 Elongation Factor G, domain II J8L76_06560 PF00009 Elongation factor Tu GTP binding domain J8L76_06565 PF00009 Elongation factor Tu GTP binding domain J8L76_06565 PF03144 Elongation factor Tu domain 2 J8L76_06565 PF03143 Elongation factor Tu C-terminal domain J8L76_06570 PF00338 Ribosomal protein S10p/S20e J8L76_06575 PF00297 Ribosomal protein L3 J8L76_06580 PF00573 Ribosomal protein L4/L1 family J8L76_06585 PF00276 Ribosomal protein L23 J8L76_06590 PF03947 Ribosomal Proteins L2, C-terminal domain J8L76_06590 PF00181 Ribosomal Proteins L2, RNA binding domain J8L76_06595 PF00203 Ribosomal protein S19 J8L76_06600 PF00237 Ribosomal protein L22p/L17e J8L76_06605 PF07650 KH domain J8L76_06605 PF00189 Ribosomal protein S3, C-terminal domain J8L76_06610 PF00252 Ribosomal protein L16p/L10e J8L76_06615 PF00831 Ribosomal L29 protein J8L76_06620 PF00366 Ribosomal protein S17 J8L76_06625 PF00238 Ribosomal protein L14p/L23e J8L76_06630 PF17136 Ribosomal proteins 50S L24/mitochondrial 39S L24 J8L76_06635 PF00673 ribosomal L5P family C-terminus J8L76_06635 PF00281 Ribosomal protein L5 J8L76_06640 PF00253 Ribosomal protein S14p/S29e J8L76_06645 PF00410 Ribosomal protein S8 J8L76_06650 PF00347 Ribosomal protein L6 J8L76_06655 PF00861 Ribosomal L18 of archaea, bacteria, mitoch. and chloroplast J8L76_06660 PF00333 Ribosomal protein S5, N-terminal domain J8L76_06660 PF03719 Ribosomal protein S5, C-terminal domain J8L76_06665 PF00327 Ribosomal protein L30p/L7e J8L76_06670 PF00828 Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27A J8L76_06675 PF00344 SecY translocase J8L76_06680 PF01176 Translation initiation factor 1A / IF-1 J8L76_06685 PF00444 Ribosomal protein L36 J8L76_06690 PF00416 Ribosomal protein S13/S18 J8L76_06695 PF00411 Ribosomal protein S11 J8L76_06700 PF00163 Ribosomal protein S4/S9 N-terminal domain J8L76_06700 PF01479 S4 domain J8L76_06705 PF01000 RNA polymerase Rpb3/RpoA insert domain J8L76_06705 PF03118 Bacterial RNA polymerase, alpha chain C terminal domain J8L76_06705 PF01193 RNA polymerase Rpb3/Rpb11 dimerisation domain J8L76_06710 PF01196 Ribosomal protein L17 J8L76_06715 PF00664 ABC transporter transmembrane region J8L76_06715 PF00005 ABC transporter J8L76_06725 PF00440 Bacterial regulatory proteins, tetR family J8L76_06725 PF18665 Tetracyclin repressor-like, C-terminal domain J8L76_06730 PF09317 Domain of unknown function (DUF1974) J8L76_06730 PF00441 Acyl-CoA dehydrogenase, C-terminal domain J8L76_06730 PF02771 Acyl-CoA dehydrogenase, N-terminal domain J8L76_06735 PF00108 Thiolase, N-terminal domain J8L76_06735 PF02803 Thiolase, C-terminal domain J8L76_06740 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain J8L76_06740 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain J8L76_06740 PF00378 Enoyl-CoA hydratase/isomerase J8L76_06745 PF03061 Thioesterase superfamily J8L76_06750 PF03349 Outer membrane protein transport protein (OMPP1/FadL/TodX) J8L76_06755 PF00378 Enoyl-CoA hydratase/isomerase J8L76_06755 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain J8L76_06755 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain J8L76_06760 PF00108 Thiolase, N-terminal domain J8L76_06760 PF02803 Thiolase, C-terminal domain J8L76_06785 PF01042 Endoribonuclease L-PSP J8L76_06790 PF00270 DEAD/DEAH box helicase J8L76_06790 PF00271 Helicase conserved C-terminal domain J8L76_06790 PF17191 RecG wedge domain J8L76_06800 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain J8L76_06800 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain J8L76_06805 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain J8L76_06805 PF00672 HAMP domain J8L76_06805 PF12729 Four helix bundle sensory module for signal transduction J8L76_06810 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain J8L76_06810 PF08447 PAS fold J8L76_06815 PF07963 Prokaryotic N-terminal methylation motif J8L76_06815 PF00114 Pilin (bacterial filament) J8L76_06820 PF02384 N-6 DNA Methylase J8L76_06830 PF11867 Domain of unknown function (DUF3387) J8L76_06830 PF04313 Type I restriction enzyme R protein N terminus (HSDR_N) J8L76_06830 PF18766 SWI2/SNF2 ATPase J8L76_06845 PF00919 Uncharacterized protein family UPF0004 J8L76_06845 PF01938 TRAM domain J8L76_06845 PF04055 Radical SAM superfamily J8L76_06850 PF02562 PhoH-like protein J8L76_06855 PF02130 Uncharacterized protein family UPF0054 J8L76_06860 PF00571 CBS domain J8L76_06860 PF03471 Transporter associated domain J8L76_06865 PF00795 Carbon-nitrogen hydrolase J8L76_06870 PF02091 Glycyl-tRNA synthetase alpha subunit J8L76_06875 PF05746 DALR anticodon binding domain J8L76_06875 PF02092 Glycyl-tRNA synthetase beta subunit J8L76_06895 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily J8L76_06900 PF01339 CheB methylesterase J8L76_06900 PF00072 Response regulator receiver domain J8L76_06905 PF17657 Bacterial DNA polymerase III alpha subunit finger domain J8L76_06905 PF14579 Helix-hairpin-helix motif J8L76_06905 PF02811 PHP domain J8L76_06905 PF01336 OB-fold nucleic acid binding domain J8L76_06905 PF07733 Bacterial DNA polymerase III alpha NTPase domain J8L76_06920 PF00578 AhpC/TSA family J8L76_06945 PF10417 C-terminal domain of 1-Cys peroxiredoxin J8L76_06945 PF00578 AhpC/TSA family J8L76_06955 PF00708 Acylphosphatase J8L76_06960 PF01740 STAS domain J8L76_06960 PF00916 Sulfate permease family J8L76_06965 PF08264 Anticodon-binding domain of tRNA J8L76_06965 PF09334 tRNA synthetases class I (M) J8L76_06965 PF01588 Putative tRNA binding domain J8L76_06970 PF10609 NUBPL iron-transfer P-loop NTPase J8L76_06975 PF00692 dUTPase J8L76_06980 PF03709 Orn/Lys/Arg decarboxylase, N-terminal domain J8L76_06980 PF01276 Orn/Lys/Arg decarboxylase, major domain J8L76_06980 PF03711 Orn/Lys/Arg decarboxylase, C-terminal domain J8L76_06985 PF00186 Dihydrofolate reductase J8L76_06990 PF00342 Phosphoglucose isomerase J8L76_06995 PF00303 Thymidylate synthase J8L76_07005 PF00994 Probable molybdopterin binding domain J8L76_07010 PF04751 Protein of unknown function (DUF615) J8L76_07015 PF01523 Putative modulator of DNA gyrase J8L76_07020 PF00300 Histidine phosphatase superfamily (branch 1) J8L76_07025 PF00464 Serine hydroxymethyltransferase J8L76_07030 PF03477 ATP cone domain J8L76_07035 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region J8L76_07035 PF01872 RibD C-terminal domain J8L76_07040 PF00899 ThiF family J8L76_07050 PF13180 PDZ domain J8L76_07050 PF03572 Peptidase family S41 J8L76_07055 PF01551 Peptidase family M23 J8L76_07065 PF00581 Rhodanese-like domain J8L76_07070 PF00462 Glutaredoxin J8L76_07075 PF02556 Preprotein translocase subunit SecB J8L76_07085 PF07479 NAD-dependent glycerol-3-phosphate dehydrogenase C-terminus J8L76_07085 PF01210 NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus J8L76_07090 PF00588 SpoU rRNA Methylase family J8L76_07095 PF05157 Type II secretion system (T2SS), protein E, N-terminal domain J8L76_07095 PF00437 Type II/IV secretion system protein J8L76_07100 PF00482 Type II secretion system (T2SS), protein F J8L76_07110 PF07963 Prokaryotic N-terminal methylation motif J8L76_07175 PF00263 Bacterial type II and III secretion system protein J8L76_07175 PF03958 Bacterial type II/III secretion system short domain J8L76_07180 PF13401 AAA domain J8L76_07180 PF01471 Putative peptidoglycan binding domain J8L76_07190 PF00156 Phosphoribosyl transferase domain J8L76_07195 PF06968 Biotin and Thiamin Synthesis associated domain J8L76_07195 PF04055 Radical SAM superfamily J8L76_07200 PF08241 Methyltransferase domain J8L76_07205 PF00034 Cytochrome c J8L76_07210 PF01926 50S ribosome-binding GTPase J8L76_07215 PF00490 Delta-aminolevulinic acid dehydratase J8L76_07225 PF00696 Amino acid kinase family J8L76_07255 PF02938 GAD domain J8L76_07255 PF00152 tRNA synthetases class II (D, K and N) J8L76_07255 PF01336 OB-fold nucleic acid binding domain J8L76_07270 PF06750 Bacterial Peptidase A24 N-terminal domain J8L76_07270 PF01478 Type IV leader peptidase family J8L76_07275 PF00482 Type II secretion system (T2SS), protein F J8L76_07280 PF00437 Type II/IV secretion system protein J8L76_07280 PF05157 Type II secretion system (T2SS), protein E, N-terminal domain J8L76_07285 PF01578 Cytochrome C assembly protein J8L76_07290 PF00448 SRP54-type protein, GTPase domain J8L76_07290 PF02881 SRP54-type protein, helical bundle domain J8L76_07290 PF02978 Signal peptide binding domain J8L76_07295 PF11873 Membrane-bound lytic murein transglycosylase C, N-terminal domain J8L76_07295 PF01464 Transglycosylase SLT domain J8L76_07300 PF03129 Anticodon binding domain J8L76_07300 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) J8L76_07300 PF04073 Aminoacyl-tRNA editing domain J8L76_07305 PF00293 NUDIX domain J8L76_07320 PF03232 Ubiquinone biosynthesis protein COQ7 J8L76_07325 PF02566 OsmC-like protein J8L76_07330 PF00572 Ribosomal protein L13 J8L76_07335 PF00380 Ribosomal protein S9/S16 J8L76_07350 PF01521 Iron-sulphur cluster biosynthesis J8L76_07400 PF00271 Helicase conserved C-terminal domain J8L76_07400 PF04408 Helicase associated domain (HA2) J8L76_07400 PF07717 Oligonucleotide/oligosaccharide-binding (OB)-fold J8L76_07400 PF00270 DEAD/DEAH box helicase J8L76_07400 PF11898 Domain of unknown function (DUF3418) J8L76_07410 PF03950 tRNA synthetases class I (E and Q), anti-codon binding domain J8L76_07410 PF00749 tRNA synthetases class I (E and Q), catalytic domain J8L76_07420 PF00215 Orotidine 5'-phosphate decarboxylase / HUMPS family J8L76_07430 PF00378 Enoyl-CoA hydratase/isomerase J8L76_07435 PF03968 OstA-like protein J8L76_07450 PF01380 SIS domain J8L76_07450 PF00571 CBS domain J8L76_07455 PF02254 TrkA-N domain J8L76_07455 PF02080 TrkA-C domain J8L76_07455 PF00999 Sodium/hydrogen exchanger family J8L76_07460 PF07963 Prokaryotic N-terminal methylation motif J8L76_07460 PF08334 Type II secretion system (T2SS), protein G J8L76_07465 PF00211 Adenylate and Guanylate cyclase catalytic domain J8L76_07495 PF00482 Type II secretion system (T2SS), protein F J8L76_07500 PF05157 Type II secretion system (T2SS), protein E, N-terminal domain J8L76_07500 PF00437 Type II/IV secretion system protein J8L76_07510 PF03958 Bacterial type II/III secretion system short domain J8L76_07510 PF00263 Bacterial type II and III secretion system protein J8L76_07515 PF00005 ABC transporter J8L76_07520 PF02405 Permease MlaE J8L76_07525 PF02470 MlaD protein J8L76_07530 PF04333 MlaA lipoprotein J8L76_07545 PF00005 ABC transporter J8L76_07550 PF01061 ABC-2 type transporter J8L76_07555 PF01722 BolA-like protein J8L76_07560 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) J8L76_07565 PF04972 BON domain J8L76_07570 PF13580 SIS domain J8L76_07580 PF02021 Uncharacterised protein family UPF0102 J8L76_07585 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases J8L76_07590 PF01979 Amidohydrolase family J8L76_07610 PF02381 MraZ protein, putative antitoxin-like J8L76_07615 PF01795 MraW methylase family J8L76_07620 PF04999 Cell division protein FtsL J8L76_07625 PF03717 Penicillin-binding Protein dimerisation domain J8L76_07625 PF00905 Penicillin binding protein transpeptidase domain J8L76_07630 PF01225 Mur ligase family, catalytic domain J8L76_07630 PF02875 Mur ligase family, glutamate ligase domain J8L76_07630 PF08245 Mur ligase middle domain J8L76_07635 PF01225 Mur ligase family, catalytic domain J8L76_07635 PF02875 Mur ligase family, glutamate ligase domain J8L76_07635 PF08245 Mur ligase middle domain J8L76_07640 PF10555 Phospho-N-acetylmuramoyl-pentapeptide-transferase signature 1 J8L76_07640 PF00953 Glycosyl transferase family 4 J8L76_07645 PF08245 Mur ligase middle domain J8L76_07645 PF02875 Mur ligase family, glutamate ligase domain J8L76_07650 PF01098 Cell cycle protein J8L76_07655 PF04101 Glycosyltransferase family 28 C-terminal domain J8L76_07655 PF03033 Glycosyltransferase family 28 N-terminal domain J8L76_07660 PF01225 Mur ligase family, catalytic domain J8L76_07660 PF02875 Mur ligase family, glutamate ligase domain J8L76_07660 PF08245 Mur ligase middle domain J8L76_07665 PF07478 D-ala D-ala ligase C-terminus J8L76_07665 PF01820 D-ala D-ala ligase N-terminus J8L76_07670 PF03799 Cell division protein FtsQ J8L76_07670 PF08478 POTRA domain, FtsQ-type J8L76_07675 PF02491 SHS2 domain inserted in FTSA J8L76_07680 PF00091 Tubulin/FtsZ family, GTPase domain J8L76_07680 PF12327 FtsZ family, C-terminal domain J8L76_07685 PF03331 UDP-3-O-acyl N-acetylglycosamine deacetylase J8L76_07700 PF01476 LysM domain J8L76_07700 PF08525 Opacity-associated protein A N-terminal motif J8L76_07700 PF01551 Peptidase family M23 J8L76_07705 PF02810 SEC-C motif J8L76_07705 PF07517 SecA DEAD-like domain J8L76_07705 PF01043 SecA preprotein cross-linking domain J8L76_07705 PF07516 SecA Wing and Scaffold domain J8L76_07710 PF01960 ArgJ family J8L76_07715 PF03150 Di-haem cytochrome c peroxidase J8L76_07715 PF00034 Cytochrome c J8L76_07720 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family J8L76_07720 PF03466 LysR substrate binding domain J8L76_07725 PF01209 ubiE/COQ5 methyltransferase family J8L76_07730 PF04379 ApaG domain J8L76_07735 PF00834 Ribulose-phosphate 3 epimerase family J8L76_07740 PF13419 Haloacid dehalogenase-like hydrolase J8L76_07745 PF04715 Anthranilate synthase component I, N terminal region J8L76_07745 PF00425 chorismate binding enzyme J8L76_07750 PF00117 Glutamine amidotransferase class-I J8L76_07755 PF02885 Glycosyl transferase family, helical bundle domain J8L76_07755 PF00591 Glycosyl transferase family, a/b domain J8L76_07760 PF00218 Indole-3-glycerol phosphate synthase J8L76_07765 PF00267 Gram-negative porin J8L76_07770 PF01472 PUA domain J8L76_07770 PF00696 Amino acid kinase family J8L76_07775 PF01018 GTP1/OBG J8L76_07775 PF01926 50S ribosome-binding GTPase J8L76_07780 PF01016 Ribosomal L27 protein J8L76_07785 PF00829 Ribosomal prokaryotic L21 protein J8L76_07790 PF00348 Polyprenyl synthetase J8L76_07805 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases J8L76_07810 PF07992 Pyridine nucleotide-disulphide oxidoreductase J8L76_07810 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain J8L76_07810 PF01077 Nitrite and sulphite reductase 4Fe-4S domain J8L76_07810 PF04324 BFD-like [2Fe-2S] binding domain J8L76_07810 PF18267 Rubredoxin NAD+ reductase C-terminal domain J8L76_07820 PF01568 Molydopterin dinucleotide binding domain J8L76_07820 PF04324 BFD-like [2Fe-2S] binding domain J8L76_07820 PF04879 Molybdopterin oxidoreductase Fe4S4 domain J8L76_07820 PF00384 Molybdopterin oxidoreductase J8L76_07825 PF00072 Response regulator receiver domain J8L76_07825 PF08769 Sporulation initiation factor Spo0A C terminal J8L76_07840 PF00528 Binding-protein-dependent transport system inner membrane component J8L76_07845 PF00005 ABC transporter J8L76_07850 PF02600 Disulfide bond formation protein DsbB J8L76_07860 PF00072 Response regulator receiver domain J8L76_07860 PF00486 Transcriptional regulatory protein, C terminal J8L76_07865 PF00672 HAMP domain J8L76_07865 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase J8L76_07865 PF00512 His Kinase A (phospho-acceptor) domain J8L76_07885 PF08448 PAS fold J8L76_07885 PF00990 Diguanylate cyclase, GGDEF domain J8L76_07890 PF00929 Exonuclease J8L76_07895 PF17200 Single Cache domain 2 J8L76_07895 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain J8L76_07895 PF00672 HAMP domain J8L76_07900 PF00398 Ribosomal RNA adenine dimethylase J8L76_07915 PF03372 Endonuclease/Exonuclease/phosphatase family J8L76_07925 PF01432 Peptidase family M3 J8L76_07935 PF01259 SAICAR synthetase J8L76_07940 PF01209 ubiE/COQ5 methyltransferase family J8L76_07950 PF07715 TonB-dependent Receptor Plug Domain J8L76_07950 PF07660 Secretin and TonB N terminus short domain J8L76_07950 PF00593 TonB dependent receptor J8L76_07965 PF00753 Metallo-beta-lactamase superfamily J8L76_07970 PF01544 CorA-like Mg2+ transporter protein J8L76_07975 PF00899 ThiF family J8L76_07995 PF00849 RNA pseudouridylate synthase J8L76_07995 PF01479 S4 domain J8L76_08005 PF00271 Helicase conserved C-terminal domain J8L76_08005 PF00270 DEAD/DEAH box helicase J8L76_08005 PF03880 DbpA RNA binding domain J8L76_08010 PF01575 MaoC like domain J8L76_08015 PF00563 EAL domain J8L76_08015 PF00990 Diguanylate cyclase, GGDEF domain J8L76_08015 PF03707 Bacterial signalling protein N terminal repeat J8L76_08020 PF01625 Peptide methionine sulfoxide reductase J8L76_08025 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase J8L76_08035 PF01116 Fructose-bisphosphate aldolase class-II J8L76_08040 PF00881 Nitroreductase family J8L76_08045 PF00224 Pyruvate kinase, barrel domain J8L76_08045 PF02887 Pyruvate kinase, alpha/beta domain J8L76_08050 PF04305 Protein of unknown function (DUF455) J8L76_08070 PF02322 Cytochrome bd terminal oxidase subunit II J8L76_08075 PF01654 Cytochrome bd terminal oxidase subunit I J8L76_08085 PF00072 Response regulator receiver domain J8L76_08090 PF00162 Phosphoglycerate kinase J8L76_08095 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain J8L76_08095 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain J8L76_08110 PF00132 Bacterial transferase hexapeptide (six repeats) J8L76_08130 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain J8L76_08130 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain J8L76_08135 PF00456 Transketolase, thiamine diphosphate binding domain J8L76_08135 PF02780 Transketolase, C-terminal domain J8L76_08135 PF02779 Transketolase, pyrimidine binding domain J8L76_08140 PF00485 Phosphoribulokinase / Uridine kinase family J8L76_08145 PF00316 Fructose-1-6-bisphosphatase, N-terminal domain J8L76_08150 PF00563 EAL domain J8L76_08150 PF00990 Diguanylate cyclase, GGDEF domain J8L76_08150 PF03707 Bacterial signalling protein N terminal repeat J8L76_08155 PF00459 Inositol monophosphatase family J8L76_08170 PF04452 RNA methyltransferase J8L76_08175 PF03976 Polyphosphate kinase 2 (PPK2) J8L76_08180 PF00696 Amino acid kinase family J8L76_08180 PF00583 Acetyltransferase (GNAT) family J8L76_08190 PF03471 Transporter associated domain J8L76_08190 PF01595 Cyclin M transmembrane N-terminal domain J8L76_08190 PF00571 CBS domain J8L76_08195 PF02608 ABC transporter substrate-binding protein PnrA-like J8L76_08200 PF04362 Bacterial Fe(2+) trafficking J8L76_08205 PF01895 PhoU domain J8L76_08210 PF06026 Ribose 5-phosphate isomerase A (phosphoriboisomerase A) J8L76_08220 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain J8L76_08220 PF07992 Pyridine nucleotide-disulphide oxidoreductase J8L76_08225 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) J8L76_08225 PF00364 Biotin-requiring enzyme J8L76_08225 PF02817 e3 binding domain J8L76_08230 PF17831 Pyruvate dehydrogenase E1 component middle domain J8L76_08230 PF00456 Transketolase, thiamine diphosphate binding domain J8L76_08235 PF00512 His Kinase A (phospho-acceptor) domain J8L76_08235 PF00989 PAS fold J8L76_08235 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase J8L76_08240 PF00196 Bacterial regulatory proteins, luxR family J8L76_08240 PF00072 Response regulator receiver domain J8L76_08245 PF00672 HAMP domain J8L76_08245 PF02743 Cache domain J8L76_08245 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain J8L76_08250 PF00763 Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain J8L76_08250 PF02882 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain J8L76_08255 PF00731 AIR carboxylase J8L76_08260 PF02222 ATP-grasp domain J8L76_08260 PF17769 Phosphoribosylaminoimidazole carboxylase C-terminal domain J8L76_08265 PF03481 Putative GTP-binding controlling metal-binding J8L76_08265 PF01300 Telomere recombination J8L76_08280 PF17755 UvrA DNA-binding domain J8L76_08280 PF17760 UvrA interaction domain J8L76_08285 PF07690 Major Facilitator Superfamily J8L76_08290 PF00436 Single-strand binding protein family J8L76_08305 PF02705 K+ potassium transporter J8L76_08315 PF01467 Cytidylyltransferase-like J8L76_08320 PF17151 Periplasmic sensor domain J8L76_08320 PF00990 Diguanylate cyclase, GGDEF domain J8L76_08335 PF01634 ATP phosphoribosyltransferase J8L76_08340 PF00815 Histidinol dehydrogenase J8L76_08345 PF00155 Aminotransferase class I and II J8L76_08350 PF00475 Imidazoleglycerol-phosphate dehydratase J8L76_08355 PF00117 Glutamine amidotransferase class-I J8L76_08360 PF00977 Histidine biosynthesis protein J8L76_08365 PF00977 Histidine biosynthesis protein J8L76_08370 PF01502 Phosphoribosyl-AMP cyclohydrolase J8L76_08375 PF01503 Phosphoribosyl-ATP pyrophosphohydrolase J8L76_08385 PF02416 mttA/Hcf106 family J8L76_08390 PF02416 mttA/Hcf106 family J8L76_08395 PF00902 Sec-independent protein translocase protein (TatC) J8L76_08400 PF13230 Glutamine amidotransferases class-II J8L76_08405 PF13180 PDZ domain J8L76_08410 PF01784 NIF3 (NGG1p interacting factor 3) J8L76_08415 PF01557 Fumarylacetoacetate (FAA) hydrolase family J8L76_08420 PF09997 Predicted membrane protein (DUF2238) J8L76_08425 PF00360 Phytochrome region J8L76_08425 PF00990 Diguanylate cyclase, GGDEF domain J8L76_08425 PF01590 GAF domain J8L76_08425 PF00563 EAL domain J8L76_08435 PF01339 CheB methylesterase J8L76_08435 PF00072 Response regulator receiver domain J8L76_08440 PF01739 CheR methyltransferase, SAM binding domain J8L76_08440 PF03705 CheR methyltransferase, all-alpha domain J8L76_08445 PF03975 CheD chemotactic sensory transduction J8L76_08450 PF01584 CheW-like domain J8L76_08455 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain J8L76_08455 PF00672 HAMP domain J8L76_08455 PF02203 Tar ligand binding domain homologue J8L76_08460 PF01584 CheW-like domain J8L76_08460 PF02895 Signal transducing histidine kinase, homodimeric domain J8L76_08460 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase J8L76_08460 PF01627 Hpt domain J8L76_08470 PF12729 Four helix bundle sensory module for signal transduction J8L76_08470 PF00672 HAMP domain J8L76_08470 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain J8L76_08475 PF00072 Response regulator receiver domain J8L76_08480 PF01435 Peptidase family M48 J8L76_08490 PF00571 CBS domain J8L76_08490 PF01595 Cyclin M transmembrane N-terminal domain J8L76_08490 PF03471 Transporter associated domain J8L76_08495 PF04172 LrgB-like family J8L76_08500 PF03788 LrgA family J8L76_08515 PF13593 SBF-like CPA transporter family (DUF4137) J8L76_08520 PF00202 Aminotransferase class-III J8L76_08525 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain J8L76_08525 PF00672 HAMP domain J8L76_08525 PF16591 Helical bimodular sensor domain J8L76_08530 PF00990 Diguanylate cyclase, GGDEF domain J8L76_08530 PF00563 EAL domain J8L76_08530 PF03707 Bacterial signalling protein N terminal repeat J8L76_08535 PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase J8L76_08545 PF13344 Haloacid dehalogenase-like hydrolase J8L76_08545 PF00293 NUDIX domain J8L76_08550 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family J8L76_08550 PF03466 LysR substrate binding domain J8L76_08555 PF00724 NADH:flavin oxidoreductase / NADH oxidase family J8L76_08560 PF00881 Nitroreductase family J8L76_08565 PF01274 Malate synthase J8L76_08570 PF01925 Sulfite exporter TauE/SafE J8L76_08575 PF13419 Haloacid dehalogenase-like hydrolase J8L76_08580 PF03466 LysR substrate binding domain J8L76_08580 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family J8L76_08590 PF00999 Sodium/hydrogen exchanger family J8L76_08590 PF02254 TrkA-N domain J8L76_08595 PF00463 Isocitrate lyase family J8L76_08600 PF03737 Aldolase/RraA J8L76_08605 PF00004 ATPase family associated with various cellular activities (AAA) J8L76_08605 PF07724 AAA domain (Cdc48 subfamily) J8L76_08605 PF17871 AAA lid domain J8L76_08605 PF02861 Clp amino terminal domain, pathogenicity island component J8L76_08605 PF10431 C-terminal, D2-small domain, of ClpB protein J8L76_08610 PF02617 ATP-dependent Clp protease adaptor protein ClpS J8L76_08615 PF00313 'Cold-shock' DNA-binding domain J8L76_08620 PF01967 MoaC family J8L76_08625 PF01435 Peptidase family M48 J8L76_08625 PF13181 Tetratricopeptide repeat J8L76_08630 PF01206 Sulfurtransferase TusA J8L76_08635 PF00425 chorismate binding enzyme J8L76_08635 PF04715 Anthranilate synthase component I, N terminal region J8L76_08640 PF08264 Anticodon-binding domain of tRNA J8L76_08640 PF10458 Valyl tRNA synthetase tRNA binding arm J8L76_08640 PF00133 tRNA synthetases class I (I, L, M and V) J8L76_08655 PF02789 Cytosol aminopeptidase family, N-terminal domain J8L76_08655 PF00883 Cytosol aminopeptidase family, catalytic domain J8L76_08660 PF03739 Lipopolysaccharide export system permease LptF/LptG J8L76_08690 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain J8L76_08690 PF00205 Thiamine pyrophosphate enzyme, central domain J8L76_08690 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain J8L76_08695 PF10369 Small subunit of acetolactate synthase J8L76_08700 PF07991 Acetohydroxy acid isomeroreductase, NADPH-binding domain J8L76_08700 PF01450 Acetohydroxy acid isomeroreductase, catalytic domain J8L76_08705 PF02666 Phosphatidylserine decarboxylase J8L76_08710 PF01066 CDP-alcohol phosphatidyltransferase J8L76_08715 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase J8L76_08715 PF00512 His Kinase A (phospho-acceptor) domain J8L76_08720 PF00072 Response regulator receiver domain J8L76_08720 PF00486 Transcriptional regulatory protein, C terminal J8L76_08735 PF00873 AcrB/AcrD/AcrF family J8L76_08740 PF00682 HMGL-like J8L76_08740 PF08502 LeuA allosteric (dimerisation) domain J8L76_08750 PF03631 Virulence factor BrkB J8L76_08760 PF00886 Ribosomal protein S16 J8L76_08765 PF05239 PRC-barrel domain J8L76_08765 PF01782 RimM N-terminal domain J8L76_08770 PF01746 tRNA (Guanine-1)-methyltransferase J8L76_08775 PF01245 Ribosomal protein L19 J8L76_08780 PF02649 Type I GTP cyclohydrolase folE2 J8L76_08785 PF02779 Transketolase, pyrimidine binding domain J8L76_08785 PF02780 Transketolase, C-terminal domain J8L76_08785 PF13292 1-deoxy-D-xylulose-5-phosphate synthase J8L76_08790 PF00348 Polyprenyl synthetase J8L76_08795 PF02609 Exonuclease VII small subunit J8L76_08810 PF00581 Rhodanese-like domain J8L76_08820 PF08331 Domain of unknown function (DUF1730) J8L76_08825 PF02367 Threonylcarbamoyl adenosine biosynthesis protein TsaE J8L76_08830 PF01520 N-acetylmuramoyl-L-alanine amidase J8L76_08830 PF11741 AMIN domain J8L76_08835 PF06574 FAD synthetase J8L76_08835 PF01687 Riboflavin kinase J8L76_08840 PF00133 tRNA synthetases class I (I, L, M and V) J8L76_08840 PF06827 Zinc finger found in FPG and IleRS J8L76_08840 PF08264 Anticodon-binding domain of tRNA J8L76_08845 PF01252 Signal peptidase (SPase) II J8L76_08850 PF00174 Oxidoreductase molybdopterin binding domain J8L76_08855 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase J8L76_08860 PF02401 LytB protein J8L76_08870 PF05567 Neisseria PilC beta-propeller domain J8L76_08900 PF00114 Pilin (bacterial filament) J8L76_08900 PF07963 Prokaryotic N-terminal methylation motif J8L76_08915 PF08335 GlnD PII-uridylyltransferase J8L76_08915 PF03710 Glutamate-ammonia ligase adenylyltransferase J8L76_08925 PF00795 Carbon-nitrogen hydrolase J8L76_08930 PF01523 Putative modulator of DNA gyrase J8L76_08940 PF00072 Response regulator receiver domain J8L76_08945 PF00512 His Kinase A (phospho-acceptor) domain J8L76_08945 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase J8L76_08945 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) J8L76_08945 PF01627 Hpt domain J8L76_08945 PF00672 HAMP domain J8L76_08945 PF00072 Response regulator receiver domain J8L76_08950 PF00072 Response regulator receiver domain J8L76_08955 PF04055 Radical SAM superfamily J8L76_08960 PF00793 DAHP synthetase I family J8L76_08970 PF01040 UbiA prenyltransferase family J8L76_08975 PF00512 His Kinase A (phospho-acceptor) domain J8L76_08975 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase J8L76_08980 PF00486 Transcriptional regulatory protein, C terminal J8L76_08980 PF00072 Response regulator receiver domain J8L76_08985 PF00990 Diguanylate cyclase, GGDEF domain J8L76_08985 PF00563 EAL domain J8L76_08985 PF03707 Bacterial signalling protein N terminal repeat J8L76_08990 PF13336 Acetyl-CoA hydrolase/transferase C-terminal domain J8L76_08990 PF02550 Acetyl-CoA hydrolase/transferase N-terminal domain J8L76_08995 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain J8L76_08995 PF13426 PAS domain J8L76_08995 PF08447 PAS fold J8L76_09010 PF00873 AcrB/AcrD/AcrF family J8L76_09025 PF01923 Cobalamin adenosyltransferase J8L76_09030 PF01261 Xylose isomerase-like TIM barrel J8L76_09065 PF00271 Helicase conserved C-terminal domain J8L76_09065 PF00270 DEAD/DEAH box helicase J8L76_09080 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain J8L76_09080 PF01411 tRNA synthetases class II (A) J8L76_09080 PF02272 DHHA1 domain J8L76_09085 PF02866 lactate/malate dehydrogenase, alpha/beta C-terminal domain J8L76_09085 PF00056 lactate/malate dehydrogenase, NAD binding domain J8L76_09090 PF03009 Glycerophosphoryl diester phosphodiesterase family J8L76_09095 PF13416 Bacterial extracellular solute-binding protein J8L76_09105 PF07690 Major Facilitator Superfamily J8L76_09110 PF00248 Aldo/keto reductase family J8L76_09115 PF18125 RlmM ferredoxin-like domain J8L76_09115 PF01728 FtsJ-like methyltransferase J8L76_09130 PF09297 NADH pyrophosphatase zinc ribbon domain J8L76_09130 PF00293 NUDIX domain J8L76_09130 PF09296 NADH pyrophosphatase-like rudimentary NUDIX domain J8L76_09140 PF08668 HDOD domain J8L76_09140 PF00563 EAL domain J8L76_09145 PF00563 EAL domain J8L76_09145 PF08668 HDOD domain J8L76_09150 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III J8L76_09150 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I J8L76_09150 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II J8L76_09150 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain J8L76_09155 PF00561 alpha/beta hydrolase fold J8L76_09165 PF01075 Glycosyltransferase family 9 (heptosyltransferase) J8L76_09175 PF01063 Amino-transferase class IV J8L76_09180 PF00293 NUDIX domain J8L76_09200 PF04030 D-arabinono-1,4-lactone oxidase J8L76_09200 PF01565 FAD binding domain J8L76_09205 PF00106 short chain dehydrogenase J8L76_09210 PF13417 Glutathione S-transferase, N-terminal domain J8L76_09210 PF00043 Glutathione S-transferase, C-terminal domain J8L76_09215 PF00206 Lyase J8L76_09215 PF08328 Adenylosuccinate lyase C-terminal J8L76_09225 PF01322 Cytochrome C' J8L76_09235 PF07549 SecD/SecF GG Motif J8L76_09235 PF02355 Protein export membrane protein J8L76_09240 PF07549 SecD/SecF GG Motif J8L76_09240 PF13721 SecD export protein N-terminal TM region J8L76_09240 PF02355 Protein export membrane protein J8L76_09245 PF02699 Preprotein translocase subunit J8L76_09250 PF01702 Queuine tRNA-ribosyltransferase J8L76_09255 PF02547 Queuosine biosynthesis protein J8L76_09265 PF10431 C-terminal, D2-small domain, of ClpB protein J8L76_09265 PF07724 AAA domain (Cdc48 subfamily) J8L76_09265 PF00004 ATPase family associated with various cellular activities (AAA) J8L76_09265 PF17871 AAA lid domain J8L76_09285 PF10106 Uncharacterized protein conserved in bacteria (DUF2345) J8L76_09285 PF04717 Type VI secretion system, phage-baseplate injector J8L76_09285 PF13296 Putative type VI secretion system Rhs element Vgr J8L76_09295 PF05947 Type VI secretion system, TssF J8L76_09310 PF05936 Bacterial Type VI secretion, VC_A0110, EvfL, ImpJ, VasE J8L76_09320 PF13539 D-alanyl-D-alanine carboxypeptidase J8L76_09325 PF06744 Type VI secretion protein IcmF C-terminal J8L76_09325 PF14331 ImcF-related N-terminal domain J8L76_09325 PF06761 Intracellular multiplication and human macrophage-killing J8L76_09340 PF05943 Type VI secretion protein, EvpB/VC_A0108, tail sheath J8L76_09410 PF12170 DNA polymerase III tau subunit V interacting with alpha J8L76_09410 PF12168 DNA polymerase III subunits tau domain IV DnaB-binding J8L76_09410 PF12169 DNA polymerase III subunits gamma and tau domain III J8L76_09415 PF02575 YbaB/EbfC DNA-binding family J8L76_09420 PF02132 RecR protein J8L76_09420 PF13662 Toprim domain J8L76_09425 PF00355 Rieske [2Fe-2S] domain J8L76_09425 PF10399 Ubiquitinol-cytochrome C reductase Fe-S subunit TAT signal J8L76_09430 PF00032 Cytochrome b(C-terminal)/b6/petD J8L76_09430 PF00033 Cytochrome b/b6/petB J8L76_09435 PF02167 Cytochrome C1 family J8L76_09440 PF02798 Glutathione S-transferase, N-terminal domain J8L76_09440 PF00043 Glutathione S-transferase, C-terminal domain J8L76_09445 PF04386 Stringent starvation protein B J8L76_09450 PF02885 Glycosyl transferase family, helical bundle domain J8L76_09465 PF00534 Glycosyl transferases group 1 J8L76_09465 PF13439 Glycosyltransferase Family 4 J8L76_09470 PF00072 Response regulator receiver domain J8L76_09475 PF17284 Spermidine synthase tetramerisation domain J8L76_09480 PF01361 Tautomerase enzyme J8L76_09490 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family J8L76_09490 PF03466 LysR substrate binding domain J8L76_09500 PF00072 Response regulator receiver domain J8L76_09510 PF01627 Hpt domain J8L76_09510 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase J8L76_09510 PF00672 HAMP domain J8L76_09510 PF00072 Response regulator receiver domain J8L76_09510 PF00512 His Kinase A (phospho-acceptor) domain J8L76_09510 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) J8L76_09515 PF00072 Response regulator receiver domain J8L76_09515 PF00512 His Kinase A (phospho-acceptor) domain J8L76_09515 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase J8L76_09515 PF09456 RcsC Alpha-Beta-Loop (ABL) J8L76_09520 PF00672 HAMP domain J8L76_09520 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase J8L76_09520 PF00512 His Kinase A (phospho-acceptor) domain J8L76_09520 PF01627 Hpt domain J8L76_09520 PF00072 Response regulator receiver domain J8L76_09520 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) J8L76_09525 PF00072 Response regulator receiver domain J8L76_09530 PF02321 Outer membrane efflux protein J8L76_09535 PF00873 AcrB/AcrD/AcrF family J8L76_09540 PF00529 HlyD membrane-fusion protein of T1SS J8L76_09540 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion J8L76_09545 PF08361 MAATS-type transcriptional repressor, C-terminal region J8L76_09545 PF00440 Bacterial regulatory proteins, tetR family J8L76_09550 PF02554 Carbon starvation protein CstA J8L76_09550 PF13722 5TM C-terminal transporter carbon starvation CstA J8L76_09560 PF12833 Helix-turn-helix domain J8L76_09560 PF12625 Arabinose-binding domain of AraC transcription regulator, N-term J8L76_09565 PF00106 short chain dehydrogenase J8L76_09570 PF00441 Acyl-CoA dehydrogenase, C-terminal domain J8L76_09570 PF02770 Acyl-CoA dehydrogenase, middle domain J8L76_09570 PF02771 Acyl-CoA dehydrogenase, N-terminal domain J8L76_09590 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion J8L76_09590 PF00529 HlyD membrane-fusion protein of T1SS J8L76_09595 PF00873 AcrB/AcrD/AcrF family J8L76_09600 PF02321 Outer membrane efflux protein J8L76_09605 PF01062 Bestrophin, RFP-TM, chloride channel J8L76_09615 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family J8L76_09615 PF03466 LysR substrate binding domain J8L76_09620 PF01979 Amidohydrolase family J8L76_09635 PF09242 Flavocytochrome c sulphide dehydrogenase, flavin-binding J8L76_09635 PF10518 TAT (twin-arginine translocation) pathway signal sequence J8L76_09635 PF07992 Pyridine nucleotide-disulphide oxidoreductase J8L76_09640 PF00034 Cytochrome c J8L76_09655 PF00034 Cytochrome c J8L76_09660 PF00115 Cytochrome C and Quinol oxidase polypeptide I J8L76_09665 PF00092 von Willebrand factor type A domain J8L76_09675 PF07728 AAA domain (dynein-related subfamily) J8L76_09675 PF08406 CbbQ/NirQ/NorQ C-terminal J8L76_09685 PF00510 Cytochrome c oxidase subunit III J8L76_09700 PF10414 Sirohaem synthase dimerisation region J8L76_09700 PF14824 Sirohaem biosynthesis protein central J8L76_09700 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases J8L76_09705 PF13442 Cytochrome C oxidase, cbb3-type, subunit III J8L76_09710 PF00034 Cytochrome c J8L76_09715 PF13442 Cytochrome C oxidase, cbb3-type, subunit III J8L76_09725 PF17805 AsnC-like ligand binding domain J8L76_09730 PF17805 AsnC-like ligand binding domain J8L76_09730 PF13404 AsnC-type helix-turn-helix domain J8L76_09735 PF17805 AsnC-like ligand binding domain J8L76_09740 PF13186 Iron-sulfur cluster-binding domain J8L76_09740 PF04055 Radical SAM superfamily J8L76_09745 PF14715 N-terminal domain of cytochrome oxidase-cbb3, FixP J8L76_09745 PF13442 Cytochrome C oxidase, cbb3-type, subunit III J8L76_09750 PF02082 Transcriptional regulator J8L76_09755 PF01883 Iron-sulfur cluster assembly protein J8L76_09780 PF12848 ABC transporter J8L76_09780 PF16326 ABC transporter C-terminal domain J8L76_09780 PF00005 ABC transporter J8L76_09790 PF04011 LemA family J8L76_09800 PF08032 RNA 2'-O ribose methyltransferase substrate binding J8L76_09800 PF00588 SpoU rRNA Methylase family J8L76_09805 PF02384 N-6 DNA Methylase J8L76_09805 PF07669 Eco57I restriction-modification methylase J8L76_09815 PF01053 Cys/Met metabolism PLP-dependent enzyme J8L76_09820 PF13380 CoA binding domain J8L76_09825 PF00378 Enoyl-CoA hydratase/isomerase J8L76_09830 PF01053 Cys/Met metabolism PLP-dependent enzyme J8L76_09835 PF00291 Pyridoxal-phosphate dependent enzyme J8L76_09835 PF00571 CBS domain J8L76_09840 PF00581 Rhodanese-like domain J8L76_09850 PF00484 Carbonic anhydrase J8L76_09855 PF01144 Coenzyme A transferase J8L76_09865 PF02630 SCO1/SenC J8L76_09870 PF00528 Binding-protein-dependent transport system inner membrane component J8L76_09875 PF00005 ABC transporter J8L76_09880 PF09084 NMT1/THI5 like J8L76_09885 PF12792 CSS motif domain associated with EAL J8L76_09885 PF00563 EAL domain J8L76_09890 PF00970 Oxidoreductase FAD-binding domain J8L76_09890 PF00175 Oxidoreductase NAD-binding domain J8L76_09910 PF10711 Hypothetical protein (DUF2513) J8L76_09915 PF00216 Bacterial DNA-binding protein J8L76_09920 PF00009 Elongation factor Tu GTP binding domain J8L76_09925 PF01507 Phosphoadenosine phosphosulfate reductase family J8L76_09930 PF01507 Phosphoadenosine phosphosulfate reductase family J8L76_09940 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain J8L76_09940 PF01077 Nitrite and sulphite reductase 4Fe-4S domain J8L76_09945 PF01925 Sulfite exporter TauE/SafE J8L76_09950 PF03466 LysR substrate binding domain J8L76_09950 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family J8L76_09960 PF01250 Ribosomal protein S6 J8L76_09970 PF01084 Ribosomal protein S18 J8L76_09975 PF01281 Ribosomal protein L9, N-terminal domain J8L76_09975 PF03948 Ribosomal protein L9, C-terminal domain J8L76_10000 PF00772 DnaB-like helicase N terminal domain J8L76_10000 PF03796 DnaB-like helicase C terminal domain J8L76_10010 PF02562 PhoH-like protein J8L76_10010 PF13638 PIN domain J8L76_10015 PF00578 AhpC/TSA family J8L76_10025 PF00550 Phosphopantetheine attachment site J8L76_10030 PF02801 Beta-ketoacyl synthase, C-terminal domain J8L76_10030 PF00109 Beta-ketoacyl synthase, N-terminal domain J8L76_10035 PF01522 Polysaccharide deacetylase J8L76_10040 PF01370 NAD dependent epimerase/dehydratase family J8L76_10040 PF02911 Formyl transferase, C-terminal domain J8L76_10040 PF00551 Formyl transferase J8L76_10045 PF02911 Formyl transferase, C-terminal domain J8L76_10045 PF01370 NAD dependent epimerase/dehydratase family J8L76_10045 PF00551 Formyl transferase J8L76_10050 PF00535 Glycosyl transferase family 2 J8L76_10055 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family J8L76_10065 PF02366 Dolichyl-phosphate-mannose-protein mannosyltransferase J8L76_10075 PF00155 Aminotransferase class I and II J8L76_10080 PF00155 Aminotransferase class I and II J8L76_10090 PF00742 Homoserine dehydrogenase J8L76_10090 PF03447 Homoserine dehydrogenase, NAD binding domain J8L76_10090 PF01842 ACT domain J8L76_10095 PF00291 Pyridoxal-phosphate dependent enzyme J8L76_10095 PF14821 Threonine synthase N terminus J8L76_10100 PF05175 Methyltransferase small domain J8L76_10100 PF17827 PrmC N-terminal domain J8L76_10105 PF01729 Quinolinate phosphoribosyl transferase, C-terminal domain J8L76_10105 PF02749 Quinolinate phosphoribosyl transferase, N-terminal domain J8L76_10110 PF01645 Conserved region in glutamate synthase J8L76_10120 PF01256 Carbohydrate kinase J8L76_10125 PF00593 TonB dependent receptor J8L76_10125 PF07660 Secretin and TonB N terminus short domain J8L76_10125 PF07715 TonB-dependent Receptor Plug Domain J8L76_10135 PF00990 Diguanylate cyclase, GGDEF domain J8L76_10135 PF05231 MASE1 J8L76_10135 PF08447 PAS fold J8L76_10135 PF08448 PAS fold J8L76_10135 PF13426 PAS domain J8L76_10135 PF00563 EAL domain J8L76_10140 PF02769 AIR synthase related protein, C-terminal domain J8L76_10140 PF18072 Formylglycinamide ribonucleotide amidotransferase linker domain J8L76_10140 PF18076 Formylglycinamide ribonucleotide amidotransferase N-terminal J8L76_10150 PF12792 CSS motif domain associated with EAL J8L76_10150 PF00563 EAL domain J8L76_10165 PF03795 YCII-related domain J8L76_10170 PF04279 Intracellular septation protein A J8L76_10175 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) J8L76_10175 PF00072 Response regulator receiver domain J8L76_10175 PF01627 Hpt domain J8L76_10175 PF00512 His Kinase A (phospho-acceptor) domain J8L76_10175 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase J8L76_10175 PF00672 HAMP domain J8L76_10180 PF04403 Paraquat-inducible protein A J8L76_10185 PF04403 Paraquat-inducible protein A J8L76_10190 PF02470 MlaD protein J8L76_10215 PF08241 Methyltransferase domain J8L76_10220 PF00561 alpha/beta hydrolase fold J8L76_10225 PF00155 Aminotransferase class I and II J8L76_10230 PF00202 Aminotransferase class-III J8L76_10245 PF03883 Peroxide stress protein YaaA J8L76_10255 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase J8L76_10255 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase J8L76_10260 PF03061 Thioesterase superfamily J8L76_10270 PF09827 CRISPR associated protein Cas2 J8L76_10275 PF01867 CRISPR associated protein Cas1 J8L76_10280 PF13395 HNH endonuclease J8L76_10280 PF18541 RuvC endonuclease subdomain 3 J8L76_10285 PF00317 Ribonucleotide reductase, all-alpha domain J8L76_10285 PF03477 ATP cone domain J8L76_10285 PF02867 Ribonucleotide reductase, barrel domain J8L76_10290 PF00871 Acetokinase family J8L76_10295 PF01515 Phosphate acetyl/butaryl transferase J8L76_10305 PF10589 NADH-ubiquinone oxidoreductase-F iron-sulfur binding region J8L76_10305 PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit J8L76_10310 PF10588 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region J8L76_10315 PF01058 NADH ubiquinone oxidoreductase, 20 Kd subunit J8L76_10320 PF00374 Nickel-dependent hydrogenase J8L76_10335 PF01384 Phosphate transporter family J8L76_10350 PF00561 alpha/beta hydrolase fold J8L76_10355 PF01053 Cys/Met metabolism PLP-dependent enzyme J8L76_10370 PF01058 NADH ubiquinone oxidoreductase, 20 Kd subunit J8L76_10370 PF14720 NiFe/NiFeSe hydrogenase small subunit C-terminal J8L76_10375 PF13247 4Fe-4S dicluster domain J8L76_10380 PF03916 Polysulphide reductase, NrfD J8L76_10385 PF00374 Nickel-dependent hydrogenase J8L76_10390 PF01750 Hydrogenase maturation protease J8L76_10405 PF03449 Transcription elongation factor, N-terminal J8L76_10405 PF01272 Transcription elongation factor, GreA/GreB, C-term J8L76_10410 PF17151 Periplasmic sensor domain J8L76_10410 PF00990 Diguanylate cyclase, GGDEF domain J8L76_10415 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase J8L76_10415 PF00183 Hsp90 protein J8L76_10420 PF07690 Major Facilitator Superfamily J8L76_10430 PF01266 FAD dependent oxidoreductase J8L76_10455 PF00579 tRNA synthetases class I (W and Y) J8L76_10465 PF02472 Biopolymer transport protein ExbD/TolR J8L76_10470 PF01618 MotA/TolQ/ExbB proton channel family J8L76_10490 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain J8L76_10490 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain J8L76_10505 PF00291 Pyridoxal-phosphate dependent enzyme J8L76_10525 PF01726 LexA DNA binding domain J8L76_10525 PF00717 Peptidase S24-like J8L76_10550 PF02811 PHP domain J8L76_10550 PF01336 OB-fold nucleic acid binding domain J8L76_10550 PF07733 Bacterial DNA polymerase III alpha NTPase domain J8L76_10550 PF17657 Bacterial DNA polymerase III alpha subunit finger domain J8L76_10550 PF14579 Helix-hairpin-helix motif J8L76_10580 PF00158 Sigma-54 interaction domain J8L76_10580 PF02954 Bacterial regulatory protein, Fis family J8L76_10580 PF01590 GAF domain J8L76_10590 PF01592 NifU-like N terminal domain J8L76_10590 PF01106 NifU-like domain J8L76_10590 PF04324 BFD-like [2Fe-2S] binding domain J8L76_10610 PF00148 Nitrogenase component 1 type Oxidoreductase J8L76_10615 PF03139 Vanadium/alternative nitrogenase delta subunit J8L76_10620 PF00148 Nitrogenase component 1 type Oxidoreductase J8L76_10625 PF00142 4Fe-4S iron sulfur cluster binding proteins, NifH/frxC family J8L76_10630 PF01590 GAF domain J8L76_10630 PF02954 Bacterial regulatory protein, Fis family J8L76_10630 PF00158 Sigma-54 interaction domain J8L76_10655 PF05163 DinB family J8L76_10665 PF06418 CTP synthase N-terminus J8L76_10665 PF00117 Glutamine amidotransferase class-I J8L76_10670 PF00793 DAHP synthetase I family J8L76_10675 PF00113 Enolase, C-terminal TIM barrel domain J8L76_10675 PF03952 Enolase, N-terminal domain J8L76_10680 PF04977 Septum formation initiator J8L76_10685 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family J8L76_10685 PF03466 LysR substrate binding domain J8L76_10690 PF07690 Major Facilitator Superfamily J8L76_10700 PF08240 Alcohol dehydrogenase GroES-like domain J8L76_10710 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase J8L76_10715 PF00672 HAMP domain J8L76_10715 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase J8L76_10715 PF00512 His Kinase A (phospho-acceptor) domain J8L76_10720 PF00072 Response regulator receiver domain J8L76_10720 PF00486 Transcriptional regulatory protein, C terminal J8L76_10725 PF12951 Passenger-associated-transport-repeat J8L76_10730 PF00696 Amino acid kinase family J8L76_10735 PF00696 Amino acid kinase family J8L76_10750 PF01624 MutS domain I J8L76_10750 PF05188 MutS domain II J8L76_10750 PF05192 MutS domain III J8L76_10750 PF05190 MutS family domain IV J8L76_10750 PF00488 MutS domain V J8L76_10760 PF00929 Exonuclease J8L76_10765 PF00075 RNase H J8L76_10770 PF08241 Methyltransferase domain J8L76_10775 PF00753 Metallo-beta-lactamase superfamily J8L76_10775 PF16123 Hydroxyacylglutathione hydrolase C-terminus J8L76_10780 PF00072 Response regulator receiver domain J8L76_10785 PF00360 Phytochrome region J8L76_10785 PF00563 EAL domain J8L76_10785 PF01590 GAF domain J8L76_10785 PF00990 Diguanylate cyclase, GGDEF domain J8L76_10795 PF01661 Macro domain J8L76_10800 PF02646 RmuC family J8L76_10810 PF00069 Protein kinase domain J8L76_10810 PF03793 PASTA domain J8L76_10815 PF13525 Outer membrane lipoprotein J8L76_10820 PF00849 RNA pseudouridylate synthase J8L76_10825 PF02578 Multi-copper polyphenol oxidoreductase laccase J8L76_10840 PF07167 Poly-beta-hydroxybutyrate polymerase (PhaC) N-terminus J8L76_10845 PF00106 short chain dehydrogenase J8L76_10850 PF05233 PHB accumulation regulatory domain J8L76_10850 PF07879 PHB/PHA accumulation regulator DNA-binding domain J8L76_10855 PF04055 Radical SAM superfamily J8L76_10855 PF18693 TRAM domain J8L76_10855 PF00919 Uncharacterized protein family UPF0004 J8L76_10860 PF01734 Patatin-like phospholipase J8L76_10865 PF02913 FAD linked oxidases, C-terminal domain J8L76_10865 PF01565 FAD binding domain J8L76_10875 PF01430 Hsp33 protein J8L76_10880 PF03960 ArsC family J8L76_10890 PF17674 HHH domain J8L76_10890 PF09371 Tex-like protein N-terminal domain J8L76_10890 PF00575 S1 RNA binding domain J8L76_10890 PF16921 Tex protein YqgF-like domain J8L76_10895 PF00563 EAL domain J8L76_10895 PF00990 Diguanylate cyclase, GGDEF domain J8L76_10895 PF03707 Bacterial signalling protein N terminal repeat J8L76_10900 PF02623 FliW protein J8L76_10905 PF00132 Bacterial transferase hexapeptide (six repeats) J8L76_10920 PF01758 Sodium Bile acid symporter family J8L76_10925 PF01451 Low molecular weight phosphotyrosine protein phosphatase J8L76_10940 PF05275 Copper resistance protein B precursor (CopB) J8L76_10945 PF07731 Multicopper oxidase J8L76_10945 PF07732 Multicopper oxidase J8L76_10945 PF00394 Multicopper oxidase J8L76_10950 PF00672 HAMP domain J8L76_10950 PF00512 His Kinase A (phospho-acceptor) domain J8L76_10950 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase J8L76_10955 PF00072 Response regulator receiver domain J8L76_10955 PF00486 Transcriptional regulatory protein, C terminal J8L76_10970 PF01546 Peptidase family M20/M25/M40 J8L76_10970 PF07687 Peptidase dimerisation domain J8L76_10990 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family J8L76_10990 PF03466 LysR substrate binding domain J8L76_11000 PF00296 Luciferase-like monooxygenase J8L76_11010 PF00005 ABC transporter J8L76_11015 PF01032 FecCD transport family J8L76_11020 PF01497 Periplasmic binding protein J8L76_11030 PF00376 MerR family regulatory protein J8L76_11030 PF09278 MerR, DNA binding J8L76_11040 PF04378 Ribosomal RNA large subunit methyltransferase D, RlmJ J8L76_11045 PF03992 Antibiotic biosynthesis monooxygenase J8L76_11050 PF07152 YaeQ protein J8L76_11060 PF12849 PBP superfamily domain J8L76_11065 PF07759 Protein of unknown function (DUF1615) J8L76_11070 PF01636 Phosphotransferase enzyme family J8L76_11075 PF01926 50S ribosome-binding GTPase J8L76_11080 PF17200 Single Cache domain 2 J8L76_11080 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain J8L76_11080 PF00672 HAMP domain J8L76_11090 PF07660 Secretin and TonB N terminus short domain J8L76_11090 PF00593 TonB dependent receptor J8L76_11090 PF07715 TonB-dependent Receptor Plug Domain J8L76_11100 PF17151 Periplasmic sensor domain J8L76_11100 PF00990 Diguanylate cyclase, GGDEF domain J8L76_11105 PF10672 S-adenosylmethionine-dependent methyltransferase J8L76_11105 PF17785 PUA-like domain J8L76_11110 PF00012 Hsp70 protein J8L76_11115 PF04172 LrgB-like family J8L76_11120 PF03788 LrgA family J8L76_11125 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family J8L76_11125 PF03466 LysR substrate binding domain J8L76_11130 PF04102 SlyX J8L76_11140 PF12392 Collagenase J8L76_11140 PF01136 Peptidase family U32 J8L76_11150 PF00724 NADH:flavin oxidoreductase / NADH oxidase family J8L76_11155 PF12801 4Fe-4S binding domain J8L76_11155 PF11614 IG-like fold at C-terminal of FixG, putative oxidoreductase J8L76_11155 PF13746 4Fe-4S dicluster domain J8L76_11160 PF00392 Bacterial regulatory proteins, gntR family J8L76_11160 PF00155 Aminotransferase class I and II J8L76_11170 PF00005 ABC transporter J8L76_11170 PF00664 ABC transporter transmembrane region J8L76_11175 PF08245 Mur ligase middle domain J8L76_11175 PF08443 RimK-like ATP-grasp domain J8L76_11175 PF02875 Mur ligase family, glutamate ligase domain J8L76_11180 PF02875 Mur ligase family, glutamate ligase domain J8L76_11180 PF08245 Mur ligase middle domain J8L76_11180 PF08443 RimK-like ATP-grasp domain J8L76_11190 PF01176 Translation initiation factor 1A / IF-1 J8L76_11195 PF00313 'Cold-shock' DNA-binding domain J8L76_11210 PF03466 LysR substrate binding domain J8L76_11210 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family J8L76_11215 PF01966 HD domain J8L76_11225 PF00005 ABC transporter J8L76_11225 PF12848 ABC transporter J8L76_11230 PF02954 Bacterial regulatory protein, Fis family J8L76_11230 PF00072 Response regulator receiver domain J8L76_11230 PF00158 Sigma-54 interaction domain J8L76_11235 PF01654 Cytochrome bd terminal oxidase subunit I J8L76_11240 PF02322 Cytochrome bd terminal oxidase subunit II J8L76_11245 PF00355 Rieske [2Fe-2S] domain J8L76_11245 PF10399 Ubiquitinol-cytochrome C reductase Fe-S subunit TAT signal J8L76_11260 PF00255 Glutathione peroxidase J8L76_11270 PF03170 Bacterial cellulose synthase subunit J8L76_11270 PF07238 PilZ domain J8L76_11270 PF00535 Glycosyl transferase family 2 J8L76_11275 PF00990 Diguanylate cyclase, GGDEF domain J8L76_11285 PF00302 Chloramphenicol acetyltransferase J8L76_11295 PF00364 Biotin-requiring enzyme J8L76_11295 PF02817 e3 binding domain J8L76_11295 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) J8L76_11305 PF02347 Glycine cleavage system P-protein J8L76_11310 PF01597 Glycine cleavage H-protein J8L76_11315 PF01571 Aminomethyltransferase folate-binding domain J8L76_11315 PF08669 Glycine cleavage T-protein C-terminal barrel domain J8L76_11325 PF00210 Ferritin-like domain J8L76_11330 PF02811 PHP domain J8L76_11335 PF01300 Telomere recombination J8L76_11340 PF02163 Peptidase family M50 J8L76_11345 PF00579 tRNA synthetases class I (W and Y) J8L76_11350 PF02616 Segregation and condensation protein ScpA J8L76_11355 PF04079 Segregation and condensation complex subunit ScpB J8L76_11360 PF00849 RNA pseudouridylate synthase J8L76_11360 PF01479 S4 domain J8L76_11365 PF02576 RimP N-terminal domain J8L76_11365 PF17384 RimP C-terminal SH3 domain J8L76_11370 PF13184 NusA-like KH domain J8L76_11370 PF08529 NusA N-terminal domain J8L76_11375 PF08364 Bacterial translation initiation factor IF-2 associated region J8L76_11375 PF04760 Translation initiation factor IF-2, N-terminal region J8L76_11375 PF00009 Elongation factor Tu GTP binding domain J8L76_11375 PF11987 Translation-initiation factor 2 J8L76_11380 PF02033 Ribosome-binding factor A J8L76_11385 PF09157 Pseudouridine synthase II TruB, C-terminal J8L76_11385 PF16198 tRNA pseudouridylate synthase B C-terminal domain J8L76_11385 PF01509 TruB family pseudouridylate synthase (N terminal domain) J8L76_11390 PF00312 Ribosomal protein S15 J8L76_11395 PF03725 3' exoribonuclease family, domain 2 J8L76_11395 PF01138 3' exoribonuclease family, domain 1 J8L76_11395 PF00575 S1 RNA binding domain J8L76_11395 PF00013 KH domain J8L76_11395 PF03726 Polyribonucleotide nucleotidyltransferase, RNA binding domain J8L76_11400 PF01258 Prokaryotic dksA/traR C4-type zinc finger J8L76_11425 PF02492 CobW/HypB/UreG, nucleotide-binding domain J8L76_11430 PF00005 ABC transporter J8L76_11430 PF02687 FtsX-like permease family J8L76_11430 PF12704 MacB-like periplasmic core domain J8L76_11435 PF00881 Nitroreductase family J8L76_11450 PF01032 FecCD transport family J8L76_11455 PF00005 ABC transporter J8L76_11465 PF07715 TonB-dependent Receptor Plug Domain J8L76_11465 PF00593 TonB dependent receptor J8L76_11470 PF01497 Periplasmic binding protein J8L76_11475 PF01618 MotA/TolQ/ExbB proton channel family J8L76_11480 PF02472 Biopolymer transport protein ExbD/TolR J8L76_11495 PF00158 Sigma-54 interaction domain J8L76_11495 PF02954 Bacterial regulatory protein, Fis family J8L76_11495 PF01590 GAF domain J8L76_11500 PF00142 4Fe-4S iron sulfur cluster binding proteins, NifH/frxC family J8L76_11515 PF01106 NifU-like domain J8L76_11520 PF00158 Sigma-54 interaction domain J8L76_11520 PF02954 Bacterial regulatory protein, Fis family J8L76_11520 PF01590 GAF domain J8L76_11530 PF00148 Nitrogenase component 1 type Oxidoreductase J8L76_11535 PF00148 Nitrogenase component 1 type Oxidoreductase J8L76_11550 PF00148 Nitrogenase component 1 type Oxidoreductase J8L76_11555 PF03139 Vanadium/alternative nitrogenase delta subunit J8L76_11560 PF00148 Nitrogenase component 1 type Oxidoreductase J8L76_11570 PF02579 Dinitrogenase iron-molybdenum cofactor J8L76_11585 PF05175 Methyltransferase small domain J8L76_11590 PF01546 Peptidase family M20/M25/M40 J8L76_11590 PF07687 Peptidase dimerisation domain J8L76_11595 PF00437 Type II/IV secretion system protein J8L76_11600 PF14602 Hexapeptide repeat of succinyl-transferase J8L76_11600 PF00132 Bacterial transferase hexapeptide (six repeats) J8L76_11600 PF14805 Tetrahydrodipicolinate N-succinyltransferase N-terminal J8L76_11605 PF00155 Aminotransferase class I and II J8L76_11615 PF03695 Uncharacterised protein family (UPF0149) J8L76_11615 PF02810 SEC-C motif J8L76_11620 PF06470 SMC proteins Flexible Hinge Domain J8L76_11620 PF02463 RecF/RecN/SMC N terminal domain J8L76_11630 PF12826 Helix-hairpin-helix motif J8L76_11630 PF03119 NAD-dependent DNA ligase C4 zinc finger domain J8L76_11630 PF01653 NAD-dependent DNA ligase adenylation domain J8L76_11630 PF00533 BRCA1 C Terminus (BRCT) domain J8L76_11630 PF03120 NAD-dependent DNA ligase OB-fold domain J8L76_11635 PF00483 Nucleotidyl transferase J8L76_11640 PF00156 Phosphoribosyl transferase domain J8L76_11645 PF01048 Phosphorylase superfamily J8L76_11650 PF01327 Polypeptide deformylase J8L76_11655 PF08335 GlnD PII-uridylyltransferase J8L76_11655 PF01966 HD domain J8L76_11655 PF01909 Nucleotidyltransferase domain J8L76_11660 PF00557 Metallopeptidase family M24 J8L76_11665 PF00318 Ribosomal protein S2 J8L76_11670 PF00889 Elongation factor TS J8L76_11675 PF00696 Amino acid kinase family J8L76_11680 PF01765 Ribosome recycling factor J8L76_11685 PF01255 Putative undecaprenyl diphosphate synthase J8L76_11695 PF08436 1-deoxy-D-xylulose 5-phosphate reductoisomerase C-terminal domain J8L76_11695 PF02670 1-deoxy-D-xylulose 5-phosphate reductoisomerase J8L76_11695 PF13288 DXP reductoisomerase C-terminal domain J8L76_11700 PF17820 PDZ domain J8L76_11700 PF02163 Peptidase family M50 J8L76_11705 PF01103 Surface antigen J8L76_11705 PF07244 Surface antigen variable number repeat J8L76_11715 PF00132 Bacterial transferase hexapeptide (six repeats) J8L76_11715 PF14602 Hexapeptide repeat of succinyl-transferase J8L76_11715 PF04613 UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase, LpxD J8L76_11720 PF07977 FabA-like domain J8L76_11725 PF13720 Udp N-acetylglucosamine O-acyltransferase; Domain 2 J8L76_11725 PF00132 Bacterial transferase hexapeptide (six repeats) J8L76_11730 PF02684 Lipid-A-disaccharide synthetase J8L76_11735 PF01351 Ribonuclease HII J8L76_11740 PF08032 RNA 2'-O ribose methyltransferase substrate binding J8L76_11740 PF00588 SpoU rRNA Methylase family J8L76_11745 PF03618 Kinase/pyrophosphorylase J8L76_11750 PF02896 PEP-utilising enzyme, TIM barrel domain J8L76_11750 PF00391 PEP-utilising enzyme, mobile domain J8L76_11750 PF01326 Pyruvate phosphate dikinase, PEP/pyruvate binding domain J8L76_11760 PF03458 UPF0126 domain J8L76_11765 PF01668 SmpB protein J8L76_11770 PF03364 Polyketide cyclase / dehydrase and lipid transport J8L76_11775 PF03658 RnfH family Ubiquitin J8L76_11785 PF00571 CBS domain J8L76_11785 PF00478 IMP dehydrogenase / GMP reductase domain J8L76_11790 PF02540 NAD synthase J8L76_11790 PF00958 GMP synthase C terminal domain J8L76_11790 PF00117 Glutamine amidotransferase class-I J8L76_11810 PF01966 HD domain J8L76_11820 PF00226 DnaJ domain J8L76_11820 PF01556 DnaJ C terminal domain J8L76_11825 PF00072 Response regulator receiver domain J8L76_11830 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase J8L76_11830 PF00512 His Kinase A (phospho-acceptor) domain J8L76_11830 PF00072 Response regulator receiver domain J8L76_11830 PF00497 Bacterial extracellular solute-binding proteins, family 3 J8L76_11835 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase J8L76_11835 PF00512 His Kinase A (phospho-acceptor) domain J8L76_11845 PF00072 Response regulator receiver domain J8L76_11845 PF00158 Sigma-54 interaction domain J8L76_11865 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain J8L76_11865 PF00672 HAMP domain J8L76_11865 PF17200 Single Cache domain 2 J8L76_11870 PF00459 Inositol monophosphatase family J8L76_11875 PF00588 SpoU rRNA Methylase family J8L76_11880 PF00132 Bacterial transferase hexapeptide (six repeats) J8L76_11885 PF02082 Transcriptional regulator J8L76_11890 PF00266 Aminotransferase class-V J8L76_11895 PF00266 Aminotransferase class-V J8L76_11900 PF01592 NifU-like N terminal domain J8L76_11905 PF01521 Iron-sulphur cluster biosynthesis J8L76_11910 PF07743 HSCB C-terminal oligomerisation domain J8L76_11915 PF00012 Hsp70 protein J8L76_11920 PF00111 2Fe-2S iron-sulfur cluster binding domain J8L76_11925 PF04384 Iron-sulphur cluster assembly J8L76_11945 PF00793 DAHP synthetase I family J8L76_11950 PF17757 UvrB interaction domain J8L76_11950 PF03461 TRCF domain J8L76_11950 PF00270 DEAD/DEAH box helicase J8L76_11950 PF02559 CarD-like/TRCF domain J8L76_11950 PF00271 Helicase conserved C-terminal domain J8L76_11960 PF02900 Catalytic LigB subunit of aromatic ring-opening dioxygenase J8L76_11960 PF01871 AMMECR1 J8L76_11965 PF01875 Memo-like protein J8L76_11970 PF13194 Domain of unknown function (DUF4010) J8L76_11975 PF01128 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase J8L76_11980 PF02542 YgbB family J8L76_11985 PF02834 LigT like Phosphoesterase J8L76_11990 PF01966 HD domain J8L76_11990 PF11871 Domain of unknown function (DUF3391) J8L76_11995 PF00672 HAMP domain J8L76_11995 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase J8L76_11995 PF00512 His Kinase A (phospho-acceptor) domain J8L76_12000 PF00072 Response regulator receiver domain J8L76_12000 PF00486 Transcriptional regulatory protein, C terminal J8L76_12010 PF00814 Glycoprotease family J8L76_12015 PF00583 Acetyltransferase (GNAT) family J8L76_12015 PF00814 Glycoprotease family J8L76_12020 PF03167 Uracil DNA glycosylase superfamily J8L76_12025 PF04011 LemA family J8L76_12040 PF07690 Major Facilitator Superfamily J8L76_12045 PF03466 LysR substrate binding domain J8L76_12045 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family J8L76_12050 PF01168 Alanine racemase, N-terminal domain J8L76_12050 PF00842 Alanine racemase, C-terminal domain J8L76_12055 PF18073 Rubredoxin metal binding domain J8L76_12060 PF00881 Nitroreductase family J8L76_12070 PF00009 Elongation factor Tu GTP binding domain J8L76_12070 PF03144 Elongation factor Tu domain 2 J8L76_12070 PF16658 Class II release factor RF3, C-terminal domain J8L76_12075 PF03707 Bacterial signalling protein N terminal repeat J8L76_12075 PF00563 EAL domain J8L76_12075 PF00990 Diguanylate cyclase, GGDEF domain J8L76_12085 PF00563 EAL domain J8L76_12085 PF01590 GAF domain J8L76_12085 PF00990 Diguanylate cyclase, GGDEF domain J8L76_12085 PF00989 PAS fold J8L76_12095 PF00009 Elongation factor Tu GTP binding domain J8L76_12095 PF03144 Elongation factor Tu domain 2 J8L76_12095 PF00679 Elongation factor G C-terminus J8L76_12100 PF06463 Molybdenum Cofactor Synthesis C J8L76_12100 PF04055 Radical SAM superfamily J8L76_12135 PF00155 Aminotransferase class I and II J8L76_12140 PF00271 Helicase conserved C-terminal domain J8L76_12140 PF04851 Type III restriction enzyme, res subunit J8L76_12140 PF02151 UvrB/uvrC motif J8L76_12140 PF12344 Ultra-violet resistance protein B J8L76_12140 PF17757 UvrB interaction domain J8L76_12145 PF01451 Low molecular weight phosphotyrosine protein phosphatase J8L76_12150 PF00575 S1 RNA binding domain J8L76_12150 PF12111 Polyribonucleotide phosphorylase C terminal J8L76_12150 PF10150 Ribonuclease E/G family J8L76_12155 PF01479 S4 domain J8L76_12155 PF00849 RNA pseudouridylate synthase J8L76_12160 PF13419 Haloacid dehalogenase-like hydrolase J8L76_12170 PF06965 Na+/H+ antiporter 1 J8L76_12170 PF01343 Peptidase family S49 J8L76_12175 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases J8L76_12180 PF02545 Maf-like protein J8L76_12185 PF02620 Large ribosomal RNA subunit accumulation protein YceD J8L76_12190 PF01783 Ribosomal L32p protein family J8L76_12195 PF02504 Fatty acid synthesis protein J8L76_12200 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III J8L76_12200 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal J8L76_12205 PF00698 Acyl transferase domain J8L76_12215 PF00550 Phosphopantetheine attachment site J8L76_12220 PF00109 Beta-ketoacyl synthase, N-terminal domain J8L76_12220 PF02801 Beta-ketoacyl synthase, C-terminal domain J8L76_12230 PF00890 FAD binding domain J8L76_12230 PF02910 Fumarate reductase flavoprotein C-term J8L76_12235 PF04542 Sigma-70 region 2 J8L76_12235 PF08281 Sigma-70, region 4 J8L76_12250 PF00679 Elongation factor G C-terminus J8L76_12250 PF00009 Elongation factor Tu GTP binding domain J8L76_12250 PF03144 Elongation factor Tu domain 2 J8L76_12250 PF06421 GTP-binding protein LepA C-terminus J8L76_12255 PF10502 Signal peptidase, peptidase S26 J8L76_12265 PF00035 Double-stranded RNA binding motif J8L76_12265 PF14622 Ribonuclease-III-like J8L76_12270 PF07650 KH domain J8L76_12270 PF01926 50S ribosome-binding GTPase J8L76_12275 PF02565 Recombination protein O C terminal J8L76_12275 PF11967 Recombination protein O N terminal J8L76_12280 PF03740 Pyridoxal phosphate biosynthesis protein PdxJ J8L76_12285 PF01648 4'-phosphopantetheinyl transferase superfamily J8L76_12290 PF00933 Glycosyl hydrolase family 3 N terminal domain J8L76_12295 PF08207 Elongation factor P (EF-P) KOW-like domain J8L76_12295 PF01132 Elongation factor P (EF-P) OB domain J8L76_12295 PF09285 Elongation factor P, C-terminal J8L76_12310 PF08459 UvrC Helix-hairpin-helix N-terminal J8L76_12310 PF01541 GIY-YIG catalytic domain J8L76_12310 PF02151 UvrB/uvrC motif J8L76_12315 PF01066 CDP-alcohol phosphatidyltransferase J8L76_12340 PF02308 MgtC family J8L76_12360 PF14437 MafB19-like deaminase J8L76_12380 PF02618 YceG-like family J8L76_12385 PF02223 Thymidylate kinase J8L76_12390 PF09115 DNA polymerase III, delta subunit, C terminal J8L76_12400 PF01026 TatD related DNase J8L76_12420 PF02537 CrcB-like protein, Camphor Resistance (CrcB) J8L76_12455 PF07516 SecA Wing and Scaffold domain J8L76_12455 PF07517 SecA DEAD-like domain J8L76_12455 PF02810 SEC-C motif J8L76_12455 PF01043 SecA preprotein cross-linking domain J8L76_12490 PF00561 alpha/beta hydrolase fold J8L76_12520 PF01613 Flavin reductase like domain J8L76_12525 PF03776 Septum formation topological specificity factor MinE J8L76_12530 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain J8L76_12535 PF05209 Septum formation inhibitor MinC, N-terminal domain J8L76_12535 PF03775 Septum formation inhibitor MinC, C-terminal domain J8L76_12540 PF13533 Biotin-lipoyl like J8L76_12545 PF00873 AcrB/AcrD/AcrF family J8L76_12550 PF00873 AcrB/AcrD/AcrF family J8L76_12555 PF02321 Outer membrane efflux protein J8L76_12560 PF14824 Sirohaem biosynthesis protein central J8L76_12560 PF10414 Sirohaem synthase dimerisation region J8L76_12560 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases J8L76_12570 PF02653 Branched-chain amino acid transport system / permease component J8L76_12580 PF00005 ABC transporter J8L76_12580 PF12399 Branched-chain amino acid ATP-binding cassette transporter J8L76_12585 PF00005 ABC transporter J8L76_12590 PF00565 Staphylococcal nuclease homologue J8L76_12595 PF04352 ProQ/FINO family J8L76_12595 PF17516 ProQ C-terminal domain J8L76_12600 PF00512 His Kinase A (phospho-acceptor) domain J8L76_12600 PF00672 HAMP domain J8L76_12600 PF16527 Two-component sensor protein CpxA, periplasmic domain J8L76_12600 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase J8L76_12605 PF00072 Response regulator receiver domain J8L76_12605 PF00486 Transcriptional regulatory protein, C terminal J8L76_12615 PF01814 Hemerythrin HHE cation binding domain J8L76_12630 PF03707 Bacterial signalling protein N terminal repeat J8L76_12630 PF00990 Diguanylate cyclase, GGDEF domain J8L76_12630 PF00563 EAL domain J8L76_12635 PF02770 Acyl-CoA dehydrogenase, middle domain J8L76_12635 PF12806 Acetyl-CoA dehydrogenase C-terminal like J8L76_12635 PF00441 Acyl-CoA dehydrogenase, C-terminal domain J8L76_12635 PF02771 Acyl-CoA dehydrogenase, N-terminal domain J8L76_12645 PF01012 Electron transfer flavoprotein domain J8L76_12645 PF00766 Electron transfer flavoprotein FAD-binding domain J8L76_12650 PF01012 Electron transfer flavoprotein domain J8L76_12660 PF00005 ABC transporter J8L76_12665 PF13472 GDSL-like Lipase/Acylhydrolase family J8L76_12670 PF00586 AIR synthase related protein, N-terminal domain J8L76_12670 PF02769 AIR synthase related protein, C-terminal domain J8L76_12675 PF00581 Rhodanese-like domain J8L76_12685 PF13607 Succinyl-CoA ligase like flavodoxin domain J8L76_12685 PF13380 CoA binding domain J8L76_12685 PF00583 Acetyltransferase (GNAT) family J8L76_12695 PF12091 Protein of unknown function (DUF3567) J8L76_12715 PF00440 Bacterial regulatory proteins, tetR family J8L76_12715 PF16925 Tetracyclin repressor-like, C-terminal domain J8L76_12720 PF00465 Iron-containing alcohol dehydrogenase J8L76_12735 PF00111 2Fe-2S iron-sulfur cluster binding domain J8L76_12735 PF00175 Oxidoreductase NAD-binding domain J8L76_12735 PF00970 Oxidoreductase FAD-binding domain J8L76_12740 PF08448 PAS fold J8L76_12740 PF00990 Diguanylate cyclase, GGDEF domain J8L76_12745 PF00563 EAL domain J8L76_12745 PF00990 Diguanylate cyclase, GGDEF domain J8L76_12745 PF03707 Bacterial signalling protein N terminal repeat J8L76_12760 PF01676 Metalloenzyme superfamily J8L76_12760 PF06415 BPG-independent PGAM N-terminus (iPGM_N) J8L76_12765 PF04717 Type VI secretion system, phage-baseplate injector J8L76_12765 PF10106 Uncharacterized protein conserved in bacteria (DUF2345) J8L76_12765 PF13296 Putative type VI secretion system Rhs element Vgr J8L76_12800 PF00990 Diguanylate cyclase, GGDEF domain J8L76_12800 PF00563 EAL domain J8L76_12800 PF03707 Bacterial signalling protein N terminal repeat J8L76_12805 PF17200 Single Cache domain 2 J8L76_12805 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain J8L76_12805 PF00672 HAMP domain J8L76_12825 PF00004 ATPase family associated with various cellular activities (AAA) J8L76_12825 PF10431 C-terminal, D2-small domain, of ClpB protein J8L76_12825 PF02861 Clp amino terminal domain, pathogenicity island component J8L76_12825 PF17871 AAA lid domain J8L76_12825 PF07724 AAA domain (Cdc48 subfamily) J8L76_12830 PF00672 HAMP domain J8L76_12830 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain J8L76_12835 PF17200 Single Cache domain 2 J8L76_12835 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain J8L76_12835 PF00672 HAMP domain J8L76_12845 PF13307 Helicase C-terminal domain J8L76_12845 PF04851 Type III restriction enzyme, res subunit J8L76_12850 PF00563 EAL domain J8L76_12850 PF00990 Diguanylate cyclase, GGDEF domain J8L76_12850 PF03707 Bacterial signalling protein N terminal repeat J8L76_12855 PF04381 Putative exonuclease, RdgC J8L76_12860 PF00216 Bacterial DNA-binding protein J8L76_12865 PF02824 TGS domain J8L76_12865 PF04607 Region found in RelA / SpoT proteins J8L76_12865 PF13291 ACT domain J8L76_12870 PF00892 EamA-like transporter family J8L76_12875 PF06167 Glucose-regulated metallo-peptidase M90 J8L76_12890 PF03772 Competence protein J8L76_12890 PF00753 Metallo-beta-lactamase superfamily J8L76_12895 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain J8L76_12895 PF17200 Single Cache domain 2 J8L76_12895 PF00672 HAMP domain J8L76_12910 PF00005 ABC transporter J8L76_12915 PF02687 FtsX-like permease family J8L76_12915 PF12704 MacB-like periplasmic core domain J8L76_12925 PF01368 DHH family J8L76_12925 PF02272 DHHA1 domain J8L76_12925 PF17768 RecJ OB domain J8L76_12935 PF00580 UvrD/REP helicase N-terminal domain J8L76_12935 PF13361 UvrD-like helicase C-terminal domain J8L76_12945 PF00152 tRNA synthetases class II (D, K and N) J8L76_12945 PF01336 OB-fold nucleic acid binding domain J8L76_12950 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) J8L76_12950 PF00072 Response regulator receiver domain J8L76_12950 PF01627 Hpt domain J8L76_12950 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase J8L76_12950 PF00672 HAMP domain J8L76_12950 PF00512 His Kinase A (phospho-acceptor) domain J8L76_12960 PF07715 TonB-dependent Receptor Plug Domain J8L76_12960 PF00593 TonB dependent receptor J8L76_12970 PF05430 S-adenosyl-L-methionine-dependent methyltransferase J8L76_12970 PF01266 FAD dependent oxidoreductase J8L76_12980 PF00072 Response regulator receiver domain J8L76_12985 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) J8L76_12985 PF00672 HAMP domain J8L76_12985 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase J8L76_12985 PF00512 His Kinase A (phospho-acceptor) domain J8L76_12985 PF01627 Hpt domain J8L76_12985 PF00072 Response regulator receiver domain J8L76_12990 PF01053 Cys/Met metabolism PLP-dependent enzyme J8L76_12995 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle J8L76_13000 PF00528 Binding-protein-dependent transport system inner membrane component J8L76_13005 PF12911 N-terminal TM domain of oligopeptide transport permease C J8L76_13005 PF00528 Binding-protein-dependent transport system inner membrane component J8L76_13010 PF03601 Conserved hypothetical protein 698 J8L76_13015 PF03466 LysR substrate binding domain J8L76_13015 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family J8L76_13030 PF05362 Lon protease (S16) C-terminal proteolytic domain J8L76_13030 PF13654 AAA domain J8L76_13040 PF03969 AFG1-like ATPase J8L76_13045 PF07992 Pyridine nucleotide-disulphide oxidoreductase J8L76_13045 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain J8L76_13050 PF02817 e3 binding domain J8L76_13050 PF00364 Biotin-requiring enzyme J8L76_13050 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) J8L76_13055 PF16078 2-oxoglutarate dehydrogenase N-terminus J8L76_13055 PF16870 2-oxoglutarate dehydrogenase C-terminal J8L76_13055 PF00676 Dehydrogenase E1 component J8L76_13055 PF02779 Transketolase, pyrimidine binding domain J8L76_13060 PF00285 Citrate synthase, C-terminal domain J8L76_13065 PF03937 Flavinator of succinate dehydrogenase J8L76_13070 PF13085 2Fe-2S iron-sulfur cluster binding domain J8L76_13075 PF00890 FAD binding domain J8L76_13075 PF02910 Fumarate reductase flavoprotein C-term J8L76_13090 PF07702 UTRA domain J8L76_13090 PF00392 Bacterial regulatory proteins, gntR family J8L76_13095 PF02866 lactate/malate dehydrogenase, alpha/beta C-terminal domain J8L76_13095 PF00056 lactate/malate dehydrogenase, NAD binding domain J8L76_13115 PF00330 Aconitase family (aconitate hydratase) J8L76_13115 PF06434 Aconitate hydratase 2 N-terminus J8L76_13115 PF11791 Aconitate B N-terminal domain J8L76_13120 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle J8L76_13135 PF00501 AMP-binding enzyme J8L76_13135 PF13193 AMP-binding enzyme C-terminal domain J8L76_13150 PF00005 ABC transporter J8L76_13155 PF02405 Permease MlaE J8L76_13160 PF02541 Ppx/GppA phosphatase family J8L76_13165 PF13089 Polyphosphate kinase N-terminal domain J8L76_13165 PF02503 Polyphosphate kinase middle domain J8L76_13165 PF17941 Polyphosphate kinase C-terminal domain 1 J8L76_13165 PF13090 Polyphosphate kinase C-terminal domain 2 J8L76_13170 PF01027 Inhibitor of apoptosis-promoting Bax1 J8L76_13190 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase J8L76_13190 PF05231 MASE1 J8L76_13190 PF07730 Histidine kinase J8L76_13195 PF00196 Bacterial regulatory proteins, luxR family J8L76_13195 PF00072 Response regulator receiver domain J8L76_13200 PF03707 Bacterial signalling protein N terminal repeat J8L76_13200 PF00990 Diguanylate cyclase, GGDEF domain J8L76_13200 PF00563 EAL domain J8L76_13205 PF01584 CheW-like domain J8L76_13210 PF00672 HAMP domain J8L76_13210 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain J8L76_13210 PF02203 Tar ligand binding domain homologue J8L76_13215 PF09078 CheY binding J8L76_13215 PF01584 CheW-like domain J8L76_13215 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase J8L76_13215 PF02895 Signal transducing histidine kinase, homodimeric domain J8L76_13215 PF01627 Hpt domain J8L76_13225 PF00072 Response regulator receiver domain J8L76_13235 PF00072 Response regulator receiver domain J8L76_13235 PF00196 Bacterial regulatory proteins, luxR family J8L76_13240 PF00682 HMGL-like J8L76_13240 PF08502 LeuA allosteric (dimerisation) domain J8L76_13250 PF01242 6-pyruvoyl tetrahydropterin synthase J8L76_13265 PF13840 ACT domain J8L76_13265 PF01842 ACT domain J8L76_13265 PF00696 Amino acid kinase family J8L76_13295 PF03006 Haemolysin-III related J8L76_13305 PF00291 Pyridoxal-phosphate dependent enzyme J8L76_13310 PF01370 NAD dependent epimerase/dehydratase family J8L76_13315 PF00294 pfkB family carbohydrate kinase J8L76_13320 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain J8L76_13320 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain J8L76_13320 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain J8L76_13325 PF18073 Rubredoxin metal binding domain J8L76_13335 PF00216 Bacterial DNA-binding protein J8L76_13340 PF00575 S1 RNA binding domain J8L76_13345 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) J8L76_13350 PF01842 ACT domain J8L76_13350 PF02153 Prephenate dehydrogenase J8L76_13355 PF00155 Aminotransferase class I and II J8L76_13360 PF01842 ACT domain J8L76_13360 PF01817 Chorismate mutase type II J8L76_13360 PF00800 Prephenate dehydratase J8L76_13365 PF00266 Aminotransferase class-V J8L76_13370 PF03989 DNA gyrase C-terminal domain, beta-propeller J8L76_13370 PF00521 DNA gyrase/topoisomerase IV, subunit A J8L76_13375 PF01979 Amidohydrolase family J8L76_13380 PF00691 OmpA family J8L76_13400 PF01867 CRISPR associated protein Cas1 J8L76_13405 PF18019 HD domain J8L76_13410 PF09611 CRISPR-associated protein (Cas_Csy1) J8L76_13415 PF09614 CRISPR-associated protein (Cas_Csy2) J8L76_13420 PF09615 CRISPR-associated protein (Cas_Csy3) J8L76_13425 PF09618 CRISPR-associated protein (Cas_Csy4) J8L76_13430 PF08668 HDOD domain J8L76_13440 PF00749 tRNA synthetases class I (E and Q), catalytic domain J8L76_13475 PF02146 Sir2 family J8L76_13480 PF01476 LysM domain J8L76_13480 PF01464 Transglycosylase SLT domain J8L76_13485 PF00005 ABC transporter J8L76_13485 PF08352 Oligopeptide/dipeptide transporter, C-terminal region J8L76_13490 PF00528 Binding-protein-dependent transport system inner membrane component J8L76_13490 PF12911 N-terminal TM domain of oligopeptide transport permease C J8L76_13495 PF00528 Binding-protein-dependent transport system inner membrane component J8L76_13500 PF00563 EAL domain J8L76_13500 PF00990 Diguanylate cyclase, GGDEF domain J8L76_13500 PF03707 Bacterial signalling protein N terminal repeat J8L76_13505 PF04115 Ureidoglycolate lyase J8L76_13510 PF03561 Allantoicase repeat J8L76_13525 PF00576 HIUase/Transthyretin family J8L76_13530 PF01014 Uricase J8L76_13530 PF09349 OHCU decarboxylase J8L76_13535 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family J8L76_13535 PF03466 LysR substrate binding domain J8L76_13540 PF00962 Adenosine/AMP deaminase J8L76_13545 PF02608 ABC transporter substrate-binding protein PnrA-like J8L76_13550 PF00111 2Fe-2S iron-sulfur cluster binding domain J8L76_13550 PF01799 [2Fe-2S] binding domain J8L76_13555 PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase J8L76_13555 PF01315 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain J8L76_13565 PF00005 ABC transporter J8L76_13570 PF02653 Branched-chain amino acid transport system / permease component J8L76_13575 PF02653 Branched-chain amino acid transport system / permease component J8L76_13580 PF01979 Amidohydrolase family J8L76_13585 PF01979 Amidohydrolase family J8L76_13595 PF14819 Nitrile reductase, 7-cyano-7-deazaguanine-reductase N-term J8L76_13595 PF14489 QueF-like protein J8L76_13600 PF01774 UreD urease accessory protein J8L76_13605 PF00547 Urease, gamma subunit J8L76_13610 PF00699 Urease beta subunit J8L76_13615 PF00449 Urease alpha-subunit, N-terminal domain J8L76_13615 PF01979 Amidohydrolase family J8L76_13625 PF02814 UreE urease accessory protein, N-terminal domain J8L76_13625 PF05194 UreE urease accessory protein, C-terminal domain J8L76_13630 PF01730 UreF J8L76_13635 PF02492 CobW/HypB/UreG, nucleotide-binding domain J8L76_13645 PF03352 Methyladenine glycosylase J8L76_13655 PF04261 Dyp-type peroxidase family J8L76_13660 PF04287 tRNA pseudouridine synthase C J8L76_13660 PF00849 RNA pseudouridylate synthase J8L76_13665 PF00990 Diguanylate cyclase, GGDEF domain J8L76_13680 PF07167 Poly-beta-hydroxybutyrate polymerase (PhaC) N-terminus J8L76_13680 PF00561 alpha/beta hydrolase fold J8L76_13685 PF03466 LysR substrate binding domain J8L76_13685 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family J8L76_13690 PF07690 Major Facilitator Superfamily J8L76_13695 PF00709 Adenylosuccinate synthetase J8L76_13700 PF13393 Histidyl-tRNA synthetase J8L76_13705 PF09838 Uncharacterized protein conserved in bacteria (DUF2065) J8L76_13710 PF01145 SPFH domain / Band 7 family J8L76_13715 PF01145 SPFH domain / Band 7 family J8L76_13715 PF12221 Bacterial membrane protein N terminal J8L76_13720 PF16360 GTP-binding GTPase Middle Region J8L76_13720 PF13167 GTP-binding GTPase N-terminal J8L76_13720 PF01926 50S ribosome-binding GTPase J8L76_13725 PF17209 Hfq protein J8L76_13730 PF01926 50S ribosome-binding GTPase J8L76_13730 PF14714 KH-domain-like of EngA bacterial GTPase enzymes, C-terminal J8L76_13735 PF13360 PQQ-like domain J8L76_13745 PF13393 Histidyl-tRNA synthetase J8L76_13745 PF03129 Anticodon binding domain J8L76_13750 PF04551 GcpE protein J8L76_13755 PF13464 Domain of unknown function (DUF4115) J8L76_13765 PF04055 Radical SAM superfamily J8L76_13770 PF00334 Nucleoside diphosphate kinase J8L76_13775 PF03480 Bacterial extracellular solute-binding protein, family 7 J8L76_13780 PF00375 Sodium:dicarboxylate symporter family J8L76_13785 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase J8L76_13785 PF00989 PAS fold J8L76_13785 PF00512 His Kinase A (phospho-acceptor) domain J8L76_13790 PF00072 Response regulator receiver domain J8L76_13790 PF00196 Bacterial regulatory proteins, luxR family J8L76_13795 PF11734 TilS substrate C-terminal domain J8L76_13795 PF09179 TilS substrate binding domain J8L76_13795 PF01171 PP-loop family J8L76_13800 PF03255 Acetyl co-enzyme A carboxylase carboxyltransferase alpha subunit J8L76_13805 PF03707 Bacterial signalling protein N terminal repeat J8L76_13805 PF00563 EAL domain J8L76_13805 PF00990 Diguanylate cyclase, GGDEF domain J8L76_13815 PF01012 Electron transfer flavoprotein domain J8L76_13820 PF01012 Electron transfer flavoprotein domain J8L76_13820 PF00766 Electron transfer flavoprotein FAD-binding domain J8L76_13840 PF00689 Cation transporting ATPase, C-terminus J8L76_13840 PF00690 Cation transporter/ATPase, N-terminus J8L76_13845 PF12804 MobA-like NTP transferase domain J8L76_13855 PF00563 EAL domain J8L76_13855 PF00990 Diguanylate cyclase, GGDEF domain J8L76_13855 PF03707 Bacterial signalling protein N terminal repeat J8L76_13865 PF00753 Metallo-beta-lactamase superfamily J8L76_13870 PF00990 Diguanylate cyclase, GGDEF domain J8L76_13870 PF00563 EAL domain J8L76_13870 PF03707 Bacterial signalling protein N terminal repeat J8L76_13885 PF00639 PPIC-type PPIASE domain J8L76_13895 PF00216 Bacterial DNA-binding protein J8L76_13900 PF05362 Lon protease (S16) C-terminal proteolytic domain J8L76_13900 PF02190 ATP-dependent protease La (LON) substrate-binding domain J8L76_13900 PF00004 ATPase family associated with various cellular activities (AAA) J8L76_13905 PF07724 AAA domain (Cdc48 subfamily) J8L76_13905 PF06689 ClpX C4-type zinc finger J8L76_13905 PF10431 C-terminal, D2-small domain, of ClpB protein J8L76_13910 PF00574 Clp protease J8L76_13915 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase J8L76_13915 PF05697 Bacterial trigger factor protein (TF) J8L76_13915 PF05698 Bacterial trigger factor protein (TF) C-terminus J8L76_13935 PF01593 Flavin containing amine oxidoreductase J8L76_13965 PF00005 ABC transporter J8L76_13990 PF01207 Dihydrouridine synthase (Dus) J8L76_13995 PF13533 Biotin-lipoyl like J8L76_14000 PF03412 Peptidase C39 family J8L76_14000 PF00005 ABC transporter J8L76_14000 PF00664 ABC transporter transmembrane region J8L76_14020 PF00512 His Kinase A (phospho-acceptor) domain J8L76_14020 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase J8L76_14035 PF00486 Transcriptional regulatory protein, C terminal J8L76_14035 PF00072 Response regulator receiver domain J8L76_14050 PF00939 Sodium:sulfate symporter transmembrane region J8L76_14060 PF05958 tRNA (Uracil-5-)-methyltransferase J8L76_14075 PF00753 Metallo-beta-lactamase superfamily J8L76_14080 PF06804 NlpB/DapX lipoprotein J8L76_14085 PF00701 Dihydrodipicolinate synthetase family J8L76_14095 PF13406 Transglycosylase SLT domain J8L76_14100 PF04542 Sigma-70 region 2 J8L76_14100 PF04539 Sigma-70 region 3 J8L76_14100 PF04545 Sigma-70, region 4 J8L76_14100 PF00140 Sigma-70 factor, region 1.2 J8L76_14105 PF01476 LysM domain J8L76_14105 PF01551 Peptidase family M23 J8L76_14115 PF01975 Survival protein SurE J8L76_14120 PF00816 H-NS histone family J8L76_14135 PF00216 Bacterial DNA-binding protein J8L76_14140 PF17759 Phenylalanyl tRNA synthetase beta chain CLM domain J8L76_14140 PF01588 Putative tRNA binding domain J8L76_14140 PF03147 Ferredoxin-fold anticodon binding domain J8L76_14140 PF03484 tRNA synthetase B5 domain J8L76_14140 PF03483 B3/4 domain J8L76_14145 PF02912 Aminoacyl tRNA synthetase class II, N-terminal domain J8L76_14145 PF01409 tRNA synthetases class II core domain (F) J8L76_14150 PF00453 Ribosomal protein L20 J8L76_14155 PF01632 Ribosomal protein L35 J8L76_14160 PF05198 Translation initiation factor IF-3, N-terminal domain J8L76_14160 PF00707 Translation initiation factor IF-3, C-terminal domain J8L76_14165 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) J8L76_14165 PF02824 TGS domain J8L76_14165 PF03129 Anticodon binding domain J8L76_14165 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain J8L76_14185 PF00474 Sodium:solute symporter family J8L76_14190 PF00929 Exonuclease J8L76_14190 PF14480 DNA polymerase III polC-type N-terminus I J8L76_14190 PF02811 PHP domain J8L76_14190 PF14579 Helix-hairpin-helix motif J8L76_14190 PF17657 Bacterial DNA polymerase III alpha subunit finger domain J8L76_14190 PF11490 DNA polymerase III polC-type N-terminus II J8L76_14190 PF07733 Bacterial DNA polymerase III alpha NTPase domain J8L76_14200 PF13193 AMP-binding enzyme C-terminal domain J8L76_14200 PF16177 Acetyl-coenzyme A synthetase N-terminus J8L76_14200 PF00501 AMP-binding enzyme J8L76_14205 PF03350 Uncharacterized protein family, UPF0114 J8L76_14220 PF01177 Asp/Glu/Hydantoin racemase J8L76_14235 PF16177 Acetyl-coenzyme A synthetase N-terminus J8L76_14235 PF00501 AMP-binding enzyme J8L76_14235 PF13193 AMP-binding enzyme C-terminal domain J8L76_14240 PF00486 Transcriptional regulatory protein, C terminal J8L76_14240 PF00072 Response regulator receiver domain J8L76_14245 PF00107 Zinc-binding dehydrogenase J8L76_14245 PF08240 Alcohol dehydrogenase GroES-like domain J8L76_14250 PF00877 NlpC/P60 family J8L76_14255 PF01734 Patatin-like phospholipase J8L76_14260 PF03588 Leucyl/phenylalanyl-tRNA protein transferase J8L76_14265 PF04376 Arginine-tRNA-protein transferase, N terminus J8L76_14265 PF04377 Arginine-tRNA-protein transferase, C terminus J8L76_14270 PF01180 Dihydroorotate dehydrogenase J8L76_14275 PF02508 Rnf-Nqr subunit, membrane protein J8L76_14280 PF04060 Putative Fe-S cluster J8L76_14285 PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit J8L76_14285 PF13375 RnfC Barrel sandwich hybrid domain J8L76_14285 PF12838 4Fe-4S dicluster domain J8L76_14290 PF03116 NQR2, RnfD, RnfE family J8L76_14295 PF04205 FMN-binding domain J8L76_14300 PF02508 Rnf-Nqr subunit, membrane protein J8L76_14305 PF10576 Iron-sulfur binding domain of endonuclease III J8L76_14305 PF00730 HhH-GPD superfamily base excision DNA repair protein J8L76_14305 PF00633 Helix-hairpin-helix motif J8L76_14320 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain J8L76_14320 PF08447 PAS fold J8L76_14330 PF00990 Diguanylate cyclase, GGDEF domain J8L76_14330 PF00072 Response regulator receiver domain J8L76_14345 PF00437 Type II/IV secretion system protein J8L76_14345 PF05157 Type II secretion system (T2SS), protein E, N-terminal domain J8L76_14350 PF01266 FAD dependent oxidoreductase J8L76_14375 PF17151 Periplasmic sensor domain J8L76_14375 PF00990 Diguanylate cyclase, GGDEF domain J8L76_14380 PF00293 NUDIX domain J8L76_14385 PF00361 Proton-conducting membrane transporter J8L76_14390 PF01059 NADH-ubiquinone oxidoreductase chain 4, amino terminus J8L76_14390 PF00361 Proton-conducting membrane transporter J8L76_14395 PF00361 Proton-conducting membrane transporter J8L76_14395 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus J8L76_14400 PF00420 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L J8L76_14405 PF00499 NADH-ubiquinone/plastoquinone oxidoreductase chain 6 J8L76_14410 PF12838 4Fe-4S dicluster domain J8L76_14415 PF00146 NADH dehydrogenase J8L76_14420 PF09326 NADH-ubiquinone oxidoreductase subunit G, C-terminal J8L76_14420 PF10588 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region J8L76_14420 PF00384 Molybdopterin oxidoreductase J8L76_14425 PF10589 NADH-ubiquinone oxidoreductase-F iron-sulfur binding region J8L76_14425 PF10531 SLBB domain J8L76_14425 PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit J8L76_14435 PF00346 Respiratory-chain NADH dehydrogenase, 49 Kd subunit J8L76_14440 PF00329 Respiratory-chain NADH dehydrogenase, 30 Kd subunit J8L76_14445 PF01058 NADH ubiquinone oxidoreductase, 20 Kd subunit J8L76_14450 PF00507 NADH-ubiquinone/plastoquinone oxidoreductase, chain 3 J8L76_14460 PF03840 Preprotein translocase SecG subunit J8L76_14465 PF00121 Triosephosphate isomerase J8L76_14470 PF00005 ABC transporter J8L76_14475 PF00528 Binding-protein-dependent transport system inner membrane component J8L76_14480 PF00528 Binding-protein-dependent transport system inner membrane component J8L76_14485 PF12849 PBP superfamily domain J8L76_14490 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain J8L76_14490 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III J8L76_14490 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I J8L76_14490 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II J8L76_14495 PF00809 Pterin binding enzyme J8L76_14500 PF01434 Peptidase family M41 J8L76_14500 PF00004 ATPase family associated with various cellular activities (AAA) J8L76_14500 PF17862 AAA+ lid domain J8L76_14500 PF06480 FtsH Extracellular J8L76_14505 PF01728 FtsJ-like methyltransferase J8L76_14520 PF01272 Transcription elongation factor, GreA/GreB, C-term J8L76_14520 PF03449 Transcription elongation factor, N-terminal J8L76_14525 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain J8L76_14525 PF02142 MGS-like domain J8L76_14525 PF02787 Carbamoyl-phosphate synthetase large chain, oligomerisation domain J8L76_14530 PF00117 Glutamine amidotransferase class-I J8L76_14530 PF00988 Carbamoyl-phosphate synthase small chain, CPSase domain J8L76_14535 PF01113 Dihydrodipicolinate reductase, N-terminus J8L76_14535 PF05173 Dihydrodipicolinate reductase, C-terminus J8L76_14540 PF04355 SmpA / OmlA family J8L76_14545 PF01475 Ferric uptake regulator family J8L76_14560 PF02463 RecF/RecN/SMC N terminal domain J8L76_14565 PF01513 ATP-NAD kinase J8L76_14570 PF01628 HrcA protein C terminal domain J8L76_14570 PF03444 Winged helix-turn-helix transcription repressor, HrcA DNA-binding J8L76_14575 PF00762 Ferrochelatase J8L76_14585 PF00085 Thioredoxin J8L76_14595 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain J8L76_14595 PF00672 HAMP domain J8L76_14595 PF02743 Cache domain J8L76_14600 PF03793 PASTA domain J8L76_14600 PF00069 Protein kinase domain J8L76_14605 PF01025 GrpE J8L76_14610 PF00012 Hsp70 protein J8L76_14615 PF01556 DnaJ C terminal domain J8L76_14615 PF00684 DnaJ central domain J8L76_14615 PF00226 DnaJ domain J8L76_14620 PF13458 Periplasmic binding protein J8L76_14625 PF01406 tRNA synthetases class I (C) catalytic domain J8L76_14625 PF09190 DALR domain J8L76_14640 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD J8L76_14645 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD J8L76_14650 PF00149 Calcineurin-like phosphoesterase J8L76_14660 PF03741 Integral membrane protein TerC family J8L76_14665 PF01161 Phosphatidylethanolamine-binding protein J8L76_14675 PF00270 DEAD/DEAH box helicase J8L76_14675 PF00570 HRDC domain J8L76_14675 PF16124 RecQ zinc-binding J8L76_14675 PF09382 RQC domain J8L76_14675 PF00271 Helicase conserved C-terminal domain J8L76_14680 PF00990 Diguanylate cyclase, GGDEF domain J8L76_14690 PF00270 DEAD/DEAH box helicase J8L76_14690 PF00271 Helicase conserved C-terminal domain J8L76_14700 PF01053 Cys/Met metabolism PLP-dependent enzyme J8L76_14705 PF00156 Phosphoribosyl transferase domain J8L76_14720 PF02875 Mur ligase family, glutamate ligase domain J8L76_14720 PF08245 Mur ligase middle domain J8L76_14725 PF01039 Carboxyl transferase domain J8L76_14725 PF17848 Acetyl-coA carboxylase zinc finger domain J8L76_14730 PF00290 Tryptophan synthase alpha chain J8L76_14735 PF00291 Pyridoxal-phosphate dependent enzyme J8L76_14740 PF00697 N-(5'phosphoribosyl)anthranilate (PRA) isomerase J8L76_14745 PF01416 tRNA pseudouridine synthase