locus-tag class description Dsui_0001 PF00425 chorismate binding enzyme Dsui_0001 PF04715 Anthranilate synthase component I, N terminal region Dsui_0002 PF01206 Sulfurtransferase TusA Dsui_0003 PF01435 Peptidase family M48 Dsui_0004 PF01967 MoaC family Dsui_0007 PF00313 'Cold-shock' DNA-binding domain Dsui_0008 PF02617 ATP-dependent Clp protease adaptor protein ClpS Dsui_0009 PF17871 AAA lid domain Dsui_0009 PF10431 C-terminal, D2-small domain, of ClpB protein Dsui_0009 PF07724 AAA domain (Cdc48 subfamily) Dsui_0009 PF00004 ATPase family associated with various cellular activities (AAA) Dsui_0009 PF02861 Clp amino terminal domain, pathogenicity island component Dsui_0010 PF03737 Aldolase/RraA Dsui_0011 PF00463 Isocitrate lyase family Dsui_0014 PF03458 UPF0126 domain Dsui_0016 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family Dsui_0016 PF03466 LysR substrate binding domain Dsui_0017 PF13419 Haloacid dehalogenase-like hydrolase Dsui_0018 PF01925 Sulfite exporter TauE/SafE Dsui_0019 PF01274 Malate synthase Dsui_0020 PF13344 Haloacid dehalogenase-like hydrolase Dsui_0020 PF18407 GCN5-related N-acetyltransferase like domain Dsui_0023 PF00202 Aminotransferase class-III Dsui_0026 PF03471 Transporter associated domain Dsui_0026 PF00571 CBS domain Dsui_0026 PF01595 Cyclin M transmembrane N-terminal domain Dsui_0027 PF03788 LrgA family Dsui_0028 PF04172 LrgB-like family Dsui_0030 PF01027 Inhibitor of apoptosis-promoting Bax1 Dsui_0031 PF00893 Small Multidrug Resistance protein Dsui_0032 PF02146 Sir2 family Dsui_0033 PF01435 Peptidase family M48 Dsui_0036 PF03544 Gram-negative bacterial TonB protein C-terminal Dsui_0037 PF02515 CoA-transferase family III Dsui_0038 PF01230 HIT domain Dsui_0039 PF00398 Ribosomal RNA adenine dimethylase Dsui_0044 PF03372 Endonuclease/Exonuclease/phosphatase family Dsui_0046 PF01432 Peptidase family M3 Dsui_0048 PF01259 SAICAR synthetase Dsui_0050 PF01116 Fructose-bisphosphate aldolase class-II Dsui_0051 PF00881 Nitroreductase family Dsui_0052 PF02887 Pyruvate kinase, alpha/beta domain Dsui_0052 PF00224 Pyruvate kinase, barrel domain Dsui_0054 PF02397 Bacterial sugar transferase Dsui_0055 PF13439 Glycosyltransferase Family 4 Dsui_0055 PF00534 Glycosyl transferases group 1 Dsui_0056 PF00535 Glycosyl transferase family 2 Dsui_0058 PF01531 Glycosyl transferase family 11 Dsui_0059 PF00535 Glycosyl transferase family 2 Dsui_0060 PF16363 GDP-mannose 4,6 dehydratase Dsui_0061 PF13439 Glycosyltransferase Family 4 Dsui_0061 PF00534 Glycosyl transferases group 1 Dsui_0062 PF00892 EamA-like transporter family Dsui_0066 PF00535 Glycosyl transferase family 2 Dsui_0067 PF04989 Cephalosporin hydroxylase Dsui_0069 PF01370 NAD dependent epimerase/dehydratase family Dsui_0070 PF08484 C-methyltransferase C-terminal domain Dsui_0070 PF08421 Putative zinc binding domain Dsui_0071 PF00908 dTDP-4-dehydrorhamnose 3,5-epimerase Dsui_0072 PF16363 GDP-mannose 4,6 dehydratase Dsui_0073 PF00483 Nucleotidyl transferase Dsui_0077 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family Dsui_0079 PF03102 NeuB family Dsui_0079 PF08666 SAF domain Dsui_0081 PF02348 Cytidylyltransferase Dsui_0082 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family Dsui_0083 PF02719 Polysaccharide biosynthesis protein Dsui_0084 PF00005 ABC transporter Dsui_0084 PF00664 ABC transporter transmembrane region Dsui_0085 PF16363 GDP-mannose 4,6 dehydratase Dsui_0086 PF01370 NAD dependent epimerase/dehydratase family Dsui_0087 PF01050 Mannose-6-phosphate isomerase Dsui_0087 PF00483 Nucleotidyl transferase Dsui_0089 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain Dsui_0089 PF17200 Single Cache domain 2 Dsui_0089 PF00672 HAMP domain Dsui_0090 PF03481 Putative GTP-binding controlling metal-binding Dsui_0090 PF01300 Telomere recombination Dsui_0091 PF02222 ATP-grasp domain Dsui_0091 PF17769 Phosphoribosylaminoimidazole carboxylase C-terminal domain Dsui_0092 PF00731 AIR carboxylase Dsui_0093 PF02882 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain Dsui_0093 PF00763 Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain Dsui_0096 PF17200 Single Cache domain 2 Dsui_0096 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain Dsui_0096 PF00672 HAMP domain Dsui_0099 PF04972 BON domain Dsui_0100 PF13580 SIS domain Dsui_0105 PF00171 Aldehyde dehydrogenase family Dsui_0106 PF04305 Protein of unknown function (DUF455) Dsui_0107 PF02163 Peptidase family M50 Dsui_0107 PF17820 PDZ domain Dsui_0109 PF00072 Response regulator receiver domain Dsui_0109 PF04397 LytTr DNA-binding domain Dsui_0110 PF06580 Histidine kinase Dsui_0110 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase Dsui_0111 PF00206 Lyase Dsui_0111 PF14698 Argininosuccinate lyase C-terminal Dsui_0112 PF00069 Protein kinase domain Dsui_0112 PF03793 PASTA domain Dsui_0114 PF00909 Ammonium Transporter Family Dsui_0117 PF13426 PAS domain Dsui_0117 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain Dsui_0117 PF08447 PAS fold Dsui_0118 PF00462 Glutaredoxin Dsui_0119 PF17827 PrmC N-terminal domain Dsui_0119 PF05175 Methyltransferase small domain Dsui_0120 PF00472 RF-1 domain Dsui_0120 PF03462 PCRF domain Dsui_0121 PF01488 Shikimate / quinate 5-dehydrogenase Dsui_0121 PF00745 Glutamyl-tRNAGlu reductase, dimerisation domain Dsui_0121 PF05201 Glutamyl-tRNAGlu reductase, N-terminal domain Dsui_0122 PF02580 D-Tyr-tRNA(Tyr) deacylase Dsui_0124 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain Dsui_0124 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain Dsui_0125 PF00171 Aldehyde dehydrogenase family Dsui_0126 PF11870 Domain of unknown function (DUF3390) Dsui_0126 PF02589 LUD domain Dsui_0126 PF13183 4Fe-4S dicluster domain Dsui_0127 PF09339 IclR helix-turn-helix domain Dsui_0127 PF01614 Bacterial transcriptional regulator Dsui_0128 PF00768 D-alanyl-D-alanine carboxypeptidase Dsui_0130 PF03949 Malic enzyme, NAD binding domain Dsui_0130 PF01515 Phosphate acetyl/butaryl transferase Dsui_0130 PF00390 Malic enzyme, N-terminal domain Dsui_0131 PF00821 Phosphoenolpyruvate carboxykinase C-terminal P-loop domain Dsui_0131 PF17297 Phosphoenolpyruvate carboxykinase N-terminal domain Dsui_0132 PF00155 Aminotransferase class I and II Dsui_0134 PF01510 N-acetylmuramoyl-L-alanine amidase Dsui_0135 PF02954 Bacterial regulatory protein, Fis family Dsui_0135 PF00072 Response regulator receiver domain Dsui_0135 PF00158 Sigma-54 interaction domain Dsui_0136 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase Dsui_0136 PF00512 His Kinase A (phospho-acceptor) domain Dsui_0138 PF00589 Phage integrase family Dsui_0141 PF06463 Molybdenum Cofactor Synthesis C Dsui_0141 PF04055 Radical SAM superfamily Dsui_0143 PF09459 Ethylbenzene dehydrogenase Dsui_0144 PF03264 NapC/NirT cytochrome c family, N-terminal region Dsui_0145 PF06778 Chlorite dismutase Dsui_0146 PF02613 Nitrate reductase delta subunit Dsui_0147 PF13435 Cytochrome c554 and c-prime Dsui_0148 PF13247 4Fe-4S dicluster domain Dsui_0149 PF00384 Molybdopterin oxidoreductase Dsui_0149 PF01568 Molydopterin dinucleotide binding domain Dsui_0150 PF00158 Sigma-54 interaction domain Dsui_0150 PF00072 Response regulator receiver domain Dsui_0150 PF02954 Bacterial regulatory protein, Fis family Dsui_0151 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase Dsui_0151 PF00512 His Kinase A (phospho-acceptor) domain Dsui_0151 PF00989 PAS fold Dsui_0154 PF06532 Negative regulator of sigma F Dsui_0155 PF08281 Sigma-70, region 4 Dsui_0155 PF04542 Sigma-70 region 2 Dsui_0156 PF01292 Prokaryotic cytochrome b561 Dsui_0157 PF00174 Oxidoreductase molybdopterin binding domain Dsui_0162 PF00348 Polyprenyl synthetase Dsui_0163 PF00829 Ribosomal prokaryotic L21 protein Dsui_0164 PF01016 Ribosomal L27 protein Dsui_0165 PF01018 GTP1/OBG Dsui_0165 PF01926 50S ribosome-binding GTPase Dsui_0166 PF00696 Amino acid kinase family Dsui_0166 PF01472 PUA domain Dsui_0167 PF13609 Gram-negative porin Dsui_0168 PF00218 Indole-3-glycerol phosphate synthase Dsui_0169 PF00591 Glycosyl transferase family, a/b domain Dsui_0169 PF02885 Glycosyl transferase family, helical bundle domain Dsui_0170 PF00117 Glutamine amidotransferase class-I Dsui_0175 PF13304 AAA domain, putative AbiEii toxin, Type IV TA system Dsui_0183 PF00717 Peptidase S24-like Dsui_0189 PF05866 Endodeoxyribonuclease RusA Dsui_0218 PF14659 Phage integrase, N-terminal SAM-like domain Dsui_0218 PF13356 Arm DNA-binding domain Dsui_0218 PF00589 Phage integrase family Dsui_0219 PF04715 Anthranilate synthase component I, N terminal region Dsui_0219 PF00425 chorismate binding enzyme Dsui_0220 PF13419 Haloacid dehalogenase-like hydrolase Dsui_0222 PF04379 ApaG domain Dsui_0223 PF01209 ubiE/COQ5 methyltransferase family Dsui_0224 PF03466 LysR substrate binding domain Dsui_0224 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family Dsui_0226 PF01960 ArgJ family Dsui_0227 PF02810 SEC-C motif Dsui_0227 PF07517 SecA DEAD-like domain Dsui_0227 PF01043 SecA preprotein cross-linking domain Dsui_0227 PF07516 SecA Wing and Scaffold domain Dsui_0228 PF08525 Opacity-associated protein A N-terminal motif Dsui_0228 PF01476 LysM domain Dsui_0228 PF01551 Peptidase family M23 Dsui_0231 PF03331 UDP-3-O-acyl N-acetylglycosamine deacetylase Dsui_0232 PF12327 FtsZ family, C-terminal domain Dsui_0232 PF00091 Tubulin/FtsZ family, GTPase domain Dsui_0233 PF02491 SHS2 domain inserted in FTSA Dsui_0234 PF03799 Cell division protein FtsQ Dsui_0234 PF08478 POTRA domain, FtsQ-type Dsui_0235 PF01820 D-ala D-ala ligase N-terminus Dsui_0235 PF07478 D-ala D-ala ligase C-terminus Dsui_0236 PF08245 Mur ligase middle domain Dsui_0236 PF02875 Mur ligase family, glutamate ligase domain Dsui_0236 PF01225 Mur ligase family, catalytic domain Dsui_0237 PF03033 Glycosyltransferase family 28 N-terminal domain Dsui_0237 PF04101 Glycosyltransferase family 28 C-terminal domain Dsui_0238 PF01098 Cell cycle protein Dsui_0239 PF02875 Mur ligase family, glutamate ligase domain Dsui_0239 PF08245 Mur ligase middle domain Dsui_0240 PF10555 Phospho-N-acetylmuramoyl-pentapeptide-transferase signature 1 Dsui_0240 PF00953 Glycosyl transferase family 4 Dsui_0241 PF08245 Mur ligase middle domain Dsui_0241 PF01225 Mur ligase family, catalytic domain Dsui_0241 PF02875 Mur ligase family, glutamate ligase domain Dsui_0242 PF02875 Mur ligase family, glutamate ligase domain Dsui_0242 PF08245 Mur ligase middle domain Dsui_0242 PF01225 Mur ligase family, catalytic domain Dsui_0243 PF00905 Penicillin binding protein transpeptidase domain Dsui_0243 PF03717 Penicillin-binding Protein dimerisation domain Dsui_0244 PF04999 Cell division protein FtsL Dsui_0245 PF01795 MraW methylase family Dsui_0246 PF02381 MraZ protein, putative antitoxin-like Dsui_0251 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases Dsui_0252 PF02021 Uncharacterised protein family UPF0102 Dsui_0254 PF01479 S4 domain Dsui_0254 PF00579 tRNA synthetases class I (W and Y) Dsui_0256 PF00255 Glutathione peroxidase Dsui_0257 PF02649 Type I GTP cyclohydrolase folE2 Dsui_0258 PF17850 CysA C-terminal regulatory domain Dsui_0258 PF00005 ABC transporter Dsui_0258 PF12857 TOBE-like domain Dsui_0259 PF00528 Binding-protein-dependent transport system inner membrane component Dsui_0260 PF00528 Binding-protein-dependent transport system inner membrane component Dsui_0262 PF03707 Bacterial signalling protein N terminal repeat Dsui_0262 PF00990 Diguanylate cyclase, GGDEF domain Dsui_0262 PF00563 EAL domain Dsui_0263 PF14376 Haem-binding domain Dsui_0263 PF00034 Cytochrome c Dsui_0263 PF03150 Di-haem cytochrome c peroxidase Dsui_0265 PF08521 Two-component sensor kinase N-terminal Dsui_0265 PF00512 His Kinase A (phospho-acceptor) domain Dsui_0265 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase Dsui_0266 PF00072 Response regulator receiver domain Dsui_0266 PF00486 Transcriptional regulatory protein, C terminal Dsui_0267 PF13533 Biotin-lipoyl like Dsui_0268 PF00005 ABC transporter Dsui_0271 PF00486 Transcriptional regulatory protein, C terminal Dsui_0271 PF00072 Response regulator receiver domain Dsui_0272 PF13492 GAF domain Dsui_0272 PF00512 His Kinase A (phospho-acceptor) domain Dsui_0272 PF13493 Domain of unknown function (DUF4118) Dsui_0272 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase Dsui_0272 PF02702 Osmosensitive K+ channel His kinase sensor domain Dsui_0277 PF02669 K+-transporting ATPase, c chain Dsui_0279 PF03814 Potassium-transporting ATPase A subunit Dsui_0282 PF02639 Uncharacterized BCR, YaiI/YqxD family COG1671 Dsui_0283 PF00118 TCP-1/cpn60 chaperonin family Dsui_0284 PF00166 Chaperonin 10 Kd subunit Dsui_0285 PF00557 Metallopeptidase family M24 Dsui_0289 PF04341 Protein of unknown function, DUF485 Dsui_0290 PF00474 Sodium:solute symporter family Dsui_0294 PF02113 D-Ala-D-Ala carboxypeptidase 3 (S13) family Dsui_0297 PF03749 Sugar fermentation stimulation protein RE domain Dsui_0297 PF17746 SfsA N-terminal OB domain Dsui_0298 PF00027 Cyclic nucleotide-binding domain Dsui_0298 PF00520 Ion transport protein Dsui_0302 PF01977 3-octaprenyl-4-hydroxybenzoate carboxy-lyase Dsui_0303 PF01040 UbiA prenyltransferase family Dsui_0305 PF03466 LysR substrate binding domain Dsui_0305 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family Dsui_0307 PF00672 HAMP domain Dsui_0307 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain Dsui_0308 PF07690 Major Facilitator Superfamily Dsui_0309 PF00270 DEAD/DEAH box helicase Dsui_0309 PF00271 Helicase conserved C-terminal domain Dsui_0310 PF03061 Thioesterase superfamily Dsui_0311 PF17191 RecG wedge domain Dsui_0311 PF00271 Helicase conserved C-terminal domain Dsui_0311 PF00270 DEAD/DEAH box helicase Dsui_0312 PF01042 Endoribonuclease L-PSP Dsui_0317 PF00108 Thiolase, N-terminal domain Dsui_0317 PF02803 Thiolase, C-terminal domain Dsui_0318 PF00378 Enoyl-CoA hydratase/isomerase Dsui_0318 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain Dsui_0318 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain Dsui_0319 PF00501 AMP-binding enzyme Dsui_0319 PF13193 AMP-binding enzyme C-terminal domain Dsui_0320 PF12625 Arabinose-binding domain of AraC transcription regulator, N-term Dsui_0320 PF12833 Helix-turn-helix domain Dsui_0321 PF03349 Outer membrane protein transport protein (OMPP1/FadL/TodX) Dsui_0322 PF03061 Thioesterase superfamily Dsui_0323 PF00378 Enoyl-CoA hydratase/isomerase Dsui_0323 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain Dsui_0323 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain Dsui_0324 PF02645 Uncharacterised protein, DegV family COG1307 Dsui_0325 PF02803 Thiolase, C-terminal domain Dsui_0325 PF00108 Thiolase, N-terminal domain Dsui_0326 PF00441 Acyl-CoA dehydrogenase, C-terminal domain Dsui_0326 PF09317 Domain of unknown function (DUF1974) Dsui_0326 PF02771 Acyl-CoA dehydrogenase, N-terminal domain Dsui_0327 PF00440 Bacterial regulatory proteins, tetR family Dsui_0327 PF18665 Tetracyclin repressor-like, C-terminal domain Dsui_0328 PF00664 ABC transporter transmembrane region Dsui_0328 PF00005 ABC transporter Dsui_0329 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase Dsui_0329 PF00989 PAS fold Dsui_0329 PF00512 His Kinase A (phospho-acceptor) domain Dsui_0330 PF00072 Response regulator receiver domain Dsui_0331 PF00989 PAS fold Dsui_0331 PF00512 His Kinase A (phospho-acceptor) domain Dsui_0331 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase Dsui_0332 PF01196 Ribosomal protein L17 Dsui_0333 PF01000 RNA polymerase Rpb3/RpoA insert domain Dsui_0333 PF03118 Bacterial RNA polymerase, alpha chain C terminal domain Dsui_0333 PF01193 RNA polymerase Rpb3/Rpb11 dimerisation domain Dsui_0334 PF00163 Ribosomal protein S4/S9 N-terminal domain Dsui_0334 PF01479 S4 domain Dsui_0335 PF00411 Ribosomal protein S11 Dsui_0336 PF00416 Ribosomal protein S13/S18 Dsui_0337 PF00444 Ribosomal protein L36 Dsui_0338 PF01176 Translation initiation factor 1A / IF-1 Dsui_0339 PF00344 SecY translocase Dsui_0340 PF00828 Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27A Dsui_0341 PF00327 Ribosomal protein L30p/L7e Dsui_0342 PF00333 Ribosomal protein S5, N-terminal domain Dsui_0342 PF03719 Ribosomal protein S5, C-terminal domain Dsui_0343 PF00861 Ribosomal L18 of archaea, bacteria, mitoch. and chloroplast Dsui_0344 PF00347 Ribosomal protein L6 Dsui_0345 PF00410 Ribosomal protein S8 Dsui_0346 PF00253 Ribosomal protein S14p/S29e Dsui_0347 PF00673 ribosomal L5P family C-terminus Dsui_0347 PF00281 Ribosomal protein L5 Dsui_0348 PF17136 Ribosomal proteins 50S L24/mitochondrial 39S L24 Dsui_0349 PF00238 Ribosomal protein L14p/L23e Dsui_0350 PF00366 Ribosomal protein S17 Dsui_0351 PF00831 Ribosomal L29 protein Dsui_0352 PF00252 Ribosomal protein L16p/L10e Dsui_0353 PF07650 KH domain Dsui_0353 PF00189 Ribosomal protein S3, C-terminal domain Dsui_0354 PF00237 Ribosomal protein L22p/L17e Dsui_0355 PF00203 Ribosomal protein S19 Dsui_0356 PF03947 Ribosomal Proteins L2, C-terminal domain Dsui_0356 PF00181 Ribosomal Proteins L2, RNA binding domain Dsui_0357 PF00276 Ribosomal protein L23 Dsui_0358 PF00573 Ribosomal protein L4/L1 family Dsui_0359 PF00297 Ribosomal protein L3 Dsui_0360 PF00338 Ribosomal protein S10p/S20e Dsui_0361 PF03143 Elongation factor Tu C-terminal domain Dsui_0361 PF00009 Elongation factor Tu GTP binding domain Dsui_0361 PF03144 Elongation factor Tu domain 2 Dsui_0362 PF14492 Elongation Factor G, domain II Dsui_0362 PF03144 Elongation factor Tu domain 2 Dsui_0362 PF03764 Elongation factor G, domain IV Dsui_0362 PF00679 Elongation factor G C-terminus Dsui_0362 PF00009 Elongation factor Tu GTP binding domain Dsui_0363 PF00177 Ribosomal protein S7p/S5e Dsui_0364 PF00164 Ribosomal protein S12/S23 Dsui_0365 PF00623 RNA polymerase Rpb1, domain 2 Dsui_0365 PF04997 RNA polymerase Rpb1, domain 1 Dsui_0365 PF04983 RNA polymerase Rpb1, domain 3 Dsui_0365 PF05000 RNA polymerase Rpb1, domain 4 Dsui_0365 PF04998 RNA polymerase Rpb1, domain 5 Dsui_0366 PF04565 RNA polymerase Rpb2, domain 3 Dsui_0366 PF04563 RNA polymerase beta subunit Dsui_0366 PF00562 RNA polymerase Rpb2, domain 6 Dsui_0366 PF04560 RNA polymerase Rpb2, domain 7 Dsui_0366 PF10385 RNA polymerase beta subunit external 1 domain Dsui_0366 PF04561 RNA polymerase Rpb2, domain 2 Dsui_0367 PF00542 Ribosomal protein L7/L12 C-terminal domain Dsui_0367 PF16320 Ribosomal protein L7/L12 dimerisation domain Dsui_0368 PF00466 Ribosomal protein L10 Dsui_0369 PF00687 Ribosomal protein L1p/L10e family Dsui_0370 PF03946 Ribosomal protein L11, N-terminal domain Dsui_0370 PF00298 Ribosomal protein L11, RNA binding domain Dsui_0371 PF02357 Transcription termination factor nusG Dsui_0371 PF00467 KOW motif Dsui_0372 PF00584 SecE/Sec61-gamma subunits of protein translocation complex Dsui_0374 PF00009 Elongation factor Tu GTP binding domain Dsui_0374 PF03144 Elongation factor Tu domain 2 Dsui_0374 PF03143 Elongation factor Tu C-terminal domain Dsui_0378 PF02913 FAD linked oxidases, C-terminal domain Dsui_0378 PF01565 FAD binding domain Dsui_0382 PF00072 Response regulator receiver domain Dsui_0382 PF00196 Bacterial regulatory proteins, luxR family Dsui_0384 PF08245 Mur ligase middle domain Dsui_0384 PF01225 Mur ligase family, catalytic domain Dsui_0384 PF02875 Mur ligase family, glutamate ligase domain Dsui_0386 PF08534 Redoxin Dsui_0387 PF01220 Dehydroquinase class II Dsui_0388 PF00364 Biotin-requiring enzyme Dsui_0389 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain Dsui_0389 PF00289 Biotin carboxylase, N-terminal domain Dsui_0389 PF02785 Biotin carboxylase C-terminal domain Dsui_0392 PF01219 Prokaryotic diacylglycerol kinase Dsui_0393 PF00534 Glycosyl transferases group 1 Dsui_0393 PF13439 Glycosyltransferase Family 4 Dsui_0394 PF00294 pfkB family carbohydrate kinase Dsui_0398 PF16363 GDP-mannose 4,6 dehydratase Dsui_0399 PF00149 Calcineurin-like phosphoesterase Dsui_0400 PF02719 Polysaccharide biosynthesis protein Dsui_0401 PF01370 NAD dependent epimerase/dehydratase family Dsui_0402 PF00535 Glycosyl transferase family 2 Dsui_0403 PF01075 Glycosyltransferase family 9 (heptosyltransferase) Dsui_0404 PF00534 Glycosyl transferases group 1 Dsui_0404 PF04413 3-Deoxy-D-manno-octulosonic-acid transferase (kdotransferase) Dsui_0405 PF02321 Outer membrane efflux protein Dsui_0408 PF00873 AcrB/AcrD/AcrF family Dsui_0409 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion Dsui_0410 PF16925 Tetracyclin repressor-like, C-terminal domain Dsui_0410 PF00440 Bacterial regulatory proteins, tetR family Dsui_0411 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle Dsui_0413 PF12911 N-terminal TM domain of oligopeptide transport permease C Dsui_0413 PF00528 Binding-protein-dependent transport system inner membrane component Dsui_0414 PF00005 ABC transporter Dsui_0414 PF08352 Oligopeptide/dipeptide transporter, C-terminal region Dsui_0415 PF08352 Oligopeptide/dipeptide transporter, C-terminal region Dsui_0415 PF00005 ABC transporter Dsui_0416 PF00392 Bacterial regulatory proteins, gntR family Dsui_0416 PF07729 FCD domain Dsui_0418 PF13593 SBF-like CPA transporter family (DUF4137) Dsui_0420 PF00155 Aminotransferase class I and II Dsui_0420 PF00392 Bacterial regulatory proteins, gntR family Dsui_0421 PF00194 Eukaryotic-type carbonic anhydrase Dsui_0422 PF01964 Radical SAM ThiC family Dsui_0422 PF13667 ThiC-associated domain Dsui_0423 PF01594 AI-2E family transporter Dsui_0424 PF03894 D-xylulose 5-phosphate/D-fructose 6-phosphate phosphoketolase Dsui_0424 PF09364 XFP N-terminal domain Dsui_0424 PF09363 XFP C-terminal domain Dsui_0425 PF03692 Putative zinc- or iron-chelating domain Dsui_0426 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family Dsui_0426 PF03466 LysR substrate binding domain Dsui_0427 PF00724 NADH:flavin oxidoreductase / NADH oxidase family Dsui_0428 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain Dsui_0428 PF00672 HAMP domain Dsui_0428 PF02203 Tar ligand binding domain homologue Dsui_0429 PF01053 Cys/Met metabolism PLP-dependent enzyme Dsui_0431 PF00892 EamA-like transporter family Dsui_0434 PF10150 Ribonuclease E/G family Dsui_0434 PF00575 S1 RNA binding domain Dsui_0436 PF01738 Dienelactone hydrolase family Dsui_0437 PF00171 Aldehyde dehydrogenase family Dsui_0438 PF00877 NlpC/P60 family Dsui_0441 PF00571 CBS domain Dsui_0441 PF03448 MgtE intracellular N domain Dsui_0441 PF01769 Divalent cation transporter Dsui_0442 PF00912 Transglycosylase Dsui_0443 PF18317 Shikimate 5'-dehydrogenase C-terminal domain Dsui_0443 PF01488 Shikimate / quinate 5-dehydrogenase Dsui_0443 PF08501 Shikimate dehydrogenase substrate binding domain Dsui_0445 PF03544 Gram-negative bacterial TonB protein C-terminal Dsui_0446 PF17876 Cold shock domain Dsui_0446 PF08206 Ribonuclease B OB domain Dsui_0446 PF00773 RNB domain Dsui_0446 PF00575 S1 RNA binding domain Dsui_0447 PF05728 Uncharacterised protein family (UPF0227) Dsui_0449 PF02673 Bacitracin resistance protein BacA Dsui_0450 PF02545 Maf-like protein Dsui_0451 PF02590 Predicted SPOUT methyltransferase Dsui_0453 PF01467 Cytidylyltransferase-like Dsui_0456 PF01636 Phosphotransferase enzyme family Dsui_0458 PF03641 Possible lysine decarboxylase Dsui_0459 PF00476 DNA polymerase family A Dsui_0459 PF01367 5'-3' exonuclease, C-terminal SAM fold Dsui_0459 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain Dsui_0459 PF01612 3'-5' exonuclease Dsui_0461 PF00534 Glycosyl transferases group 1 Dsui_0461 PF08323 Starch synthase catalytic domain Dsui_0466 PF13439 Glycosyltransferase Family 4 Dsui_0466 PF00534 Glycosyl transferases group 1 Dsui_0467 PF00664 ABC transporter transmembrane region Dsui_0467 PF00005 ABC transporter Dsui_0468 PF00534 Glycosyl transferases group 1 Dsui_0468 PF13439 Glycosyltransferase Family 4 Dsui_0469 PF01075 Glycosyltransferase family 9 (heptosyltransferase) Dsui_0471 PF02654 Cobalamin-5-phosphate synthase Dsui_0472 PF02277 Phosphoribosyltransferase Dsui_0473 PF02283 Cobinamide kinase / cobinamide phosphate guanyltransferase Dsui_0475 PF07238 PilZ domain Dsui_0476 PF04055 Radical SAM superfamily Dsui_0478 PF00691 OmpA family Dsui_0479 PF07676 WD40-like Beta Propeller Repeat Dsui_0479 PF04052 TolB amino-terminal domain Dsui_0481 PF02472 Biopolymer transport protein ExbD/TolR Dsui_0482 PF01618 MotA/TolQ/ExbB proton channel family Dsui_0483 PF03061 Thioesterase superfamily Dsui_0484 PF05496 Holliday junction DNA helicase RuvB P-loop domain Dsui_0484 PF17864 RuvB AAA lid domain Dsui_0484 PF05491 RuvB C-terminal winged helix domain Dsui_0485 PF07499 RuvA, C-terminal domain Dsui_0485 PF01330 RuvA N terminal domain Dsui_0486 PF02075 Crossover junction endodeoxyribonuclease RuvC Dsui_0489 PF01709 Transcriptional regulator Dsui_0490 PF05872 Bacterial protein of unknown function (DUF853) Dsui_0491 PF06969 HemN C-terminal domain Dsui_0491 PF04055 Radical SAM superfamily Dsui_0492 PF01725 Ham1 family Dsui_0494 PF01138 3' exoribonuclease family, domain 1 Dsui_0494 PF03725 3' exoribonuclease family, domain 2 Dsui_0496 PF03793 PASTA domain Dsui_0496 PF00069 Protein kinase domain Dsui_0497 PF03755 YicC-like family, N-terminal region Dsui_0497 PF08340 Domain of unknown function (DUF1732) Dsui_0498 PF00625 Guanylate kinase Dsui_0499 PF01192 RNA polymerase Rpb6 Dsui_0500 PF13291 ACT domain Dsui_0500 PF02824 TGS domain Dsui_0500 PF04607 Region found in RelA / SpoT proteins Dsui_0501 PF01266 FAD dependent oxidoreductase Dsui_0502 PF00378 Enoyl-CoA hydratase/isomerase Dsui_0503 PF01026 TatD related DNase Dsui_0504 PF01062 Bestrophin, RFP-TM, chloride channel Dsui_0505 PF14819 Nitrile reductase, 7-cyano-7-deazaguanine-reductase N-term Dsui_0505 PF14489 QueF-like protein Dsui_0506 PF00990 Diguanylate cyclase, GGDEF domain Dsui_0506 PF00563 EAL domain Dsui_0506 PF03707 Bacterial signalling protein N terminal repeat Dsui_0508 PF00384 Molybdopterin oxidoreductase Dsui_0508 PF04879 Molybdopterin oxidoreductase Fe4S4 domain Dsui_0508 PF01568 Molydopterin dinucleotide binding domain Dsui_0509 PF12800 4Fe-4S binding domain Dsui_0509 PF12838 4Fe-4S dicluster domain Dsui_0510 PF00037 4Fe-4S binding domain Dsui_0510 PF12801 4Fe-4S binding domain Dsui_0511 PF03892 Nitrate reductase cytochrome c-type subunit (NapB) Dsui_0513 PF00563 EAL domain Dsui_0513 PF03707 Bacterial signalling protein N terminal repeat Dsui_0513 PF00990 Diguanylate cyclase, GGDEF domain Dsui_0516 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain Dsui_0516 PF00289 Biotin carboxylase, N-terminal domain Dsui_0516 PF02785 Biotin carboxylase C-terminal domain Dsui_0517 PF01039 Carboxyl transferase domain Dsui_0519 PF02310 B12 binding domain Dsui_0519 PF01642 Methylmalonyl-CoA mutase Dsui_0520 PF00392 Bacterial regulatory proteins, gntR family Dsui_0520 PF07729 FCD domain Dsui_0521 PF00378 Enoyl-CoA hydratase/isomerase Dsui_0522 PF00474 Sodium:solute symporter family Dsui_0523 PF04341 Protein of unknown function, DUF485 Dsui_0524 PF01925 Sulfite exporter TauE/SafE Dsui_0527 PF05164 Cell division protein ZapA Dsui_0529 PF00593 TonB dependent receptor Dsui_0529 PF07715 TonB-dependent Receptor Plug Domain Dsui_0530 PF01032 FecCD transport family Dsui_0531 PF00005 ABC transporter Dsui_0532 PF02572 ATP:corrinoid adenosyltransferase BtuR/CobO/CobP Dsui_0532 PF12557 Cob(I)alamin adenosyltransferase N terminal Dsui_0533 PF07685 CobB/CobQ-like glutamine amidotransferase domain Dsui_0533 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain Dsui_0536 PF00512 His Kinase A (phospho-acceptor) domain Dsui_0536 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase Dsui_0536 PF08448 PAS fold Dsui_0536 PF13188 PAS domain Dsui_0536 PF00072 Response regulator receiver domain Dsui_0539 PF01497 Periplasmic binding protein Dsui_0540 PF00155 Aminotransferase class I and II Dsui_0541 PF03186 CobD/Cbib protein Dsui_0542 PF07685 CobB/CobQ-like glutamine amidotransferase domain Dsui_0543 PF01515 Phosphate acetyl/butaryl transferase Dsui_0543 PF03949 Malic enzyme, NAD binding domain Dsui_0543 PF00390 Malic enzyme, N-terminal domain Dsui_0548 PF04143 Sulphur transport Dsui_0549 PF06508 Queuosine biosynthesis protein QueC Dsui_0550 PF00148 Nitrogenase component 1 type Oxidoreductase Dsui_0550 PF04324 BFD-like [2Fe-2S] binding domain Dsui_0551 PF00148 Nitrogenase component 1 type Oxidoreductase Dsui_0552 PF02579 Dinitrogenase iron-molybdenum cofactor Dsui_0553 PF03270 Protein of unknown function, DUF269 Dsui_0554 PF05082 Rop-like Dsui_0556 PF12838 4Fe-4S dicluster domain Dsui_0557 PF04891 NifQ Dsui_0559 PF08274 PhnA Zinc-Ribbon Dsui_0559 PF03831 PhnA domain Dsui_0560 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family Dsui_0560 PF03459 TOBE domain Dsui_0561 PF03459 TOBE domain Dsui_0561 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family Dsui_0563 PF00528 Binding-protein-dependent transport system inner membrane component Dsui_0564 PF03459 TOBE domain Dsui_0564 PF00005 ABC transporter Dsui_0566 PF01729 Quinolinate phosphoribosyl transferase, C-terminal domain Dsui_0566 PF02749 Quinolinate phosphoribosyl transferase, N-terminal domain Dsui_0567 PF03459 TOBE domain Dsui_0567 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family Dsui_0568 PF13426 PAS domain Dsui_0568 PF08448 PAS fold Dsui_0568 PF08447 PAS fold Dsui_0568 PF00563 EAL domain Dsui_0568 PF00990 Diguanylate cyclase, GGDEF domain Dsui_0568 PF05231 MASE1 Dsui_0574 PF07992 Pyridine nucleotide-disulphide oxidoreductase Dsui_0575 PF00766 Electron transfer flavoprotein FAD-binding domain Dsui_0575 PF01012 Electron transfer flavoprotein domain Dsui_0576 PF01012 Electron transfer flavoprotein domain Dsui_0577 PF03206 Nitrogen fixation protein NifW Dsui_0578 PF00682 HMGL-like Dsui_0580 PF00004 ATPase family associated with various cellular activities (AAA) Dsui_0580 PF07724 AAA domain (Cdc48 subfamily) Dsui_0581 PF00227 Proteasome subunit Dsui_0584 PF00005 ABC transporter Dsui_0585 PF01297 Zinc-uptake complex component A periplasmic Dsui_0588 PF07683 Cobalamin synthesis protein cobW C-terminal domain Dsui_0588 PF02492 CobW/HypB/UreG, nucleotide-binding domain Dsui_0589 PF07683 Cobalamin synthesis protein cobW C-terminal domain Dsui_0589 PF02492 CobW/HypB/UreG, nucleotide-binding domain Dsui_0591 PF03441 FAD binding domain of DNA photolyase Dsui_0591 PF00875 DNA photolyase Dsui_0593 PF02622 Uncharacterized ACR, COG1678 Dsui_0594 PF03652 Holliday junction resolvase Dsui_0595 PF00156 Phosphoribosyl transferase domain Dsui_0596 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain Dsui_0596 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain Dsui_0597 PF01979 Amidohydrolase family Dsui_0599 PF04397 LytTr DNA-binding domain Dsui_0600 PF02594 Uncharacterised ACR, YggU family COG1872 Dsui_0601 PF02325 YGGT family Dsui_0602 PF14748 Pyrroline-5-carboxylate reductase dimerisation Dsui_0602 PF03807 NADP oxidoreductase coenzyme F420-dependent Dsui_0603 PF01168 Alanine racemase, N-terminal domain Dsui_0604 PF00437 Type II/IV secretion system protein Dsui_0605 PF00437 Type II/IV secretion system protein Dsui_0606 PF01170 Putative RNA methylase family UPF0020 Dsui_0606 PF02926 THUMP domain Dsui_0609 PF00970 Oxidoreductase FAD-binding domain Dsui_0609 PF00175 Oxidoreductase NAD-binding domain Dsui_0609 PF00111 2Fe-2S iron-sulfur cluster binding domain Dsui_0610 PF08668 HDOD domain Dsui_0610 PF00563 EAL domain Dsui_0611 PF02378 Phosphotransferase system, EIIC Dsui_0616 PF00005 ABC transporter Dsui_0616 PF02687 FtsX-like permease family Dsui_0616 PF12704 MacB-like periplasmic core domain Dsui_0619 PF00593 TonB dependent receptor Dsui_0619 PF07715 TonB-dependent Receptor Plug Domain Dsui_0619 PF07660 Secretin and TonB N terminus short domain Dsui_0621 PF08281 Sigma-70, region 4 Dsui_0621 PF04542 Sigma-70 region 2 Dsui_0625 PF01883 Iron-sulfur cluster assembly protein Dsui_0626 PF00005 ABC transporter Dsui_0627 PF00005 ABC transporter Dsui_0627 PF12399 Branched-chain amino acid ATP-binding cassette transporter Dsui_0628 PF11862 Domain of unknown function (DUF3382) Dsui_0628 PF02653 Branched-chain amino acid transport system / permease component Dsui_0629 PF02653 Branched-chain amino acid transport system / permease component Dsui_0630 PF13458 Periplasmic binding protein Dsui_0631 PF00034 Cytochrome c Dsui_0632 PF03190 Protein of unknown function, DUF255 Dsui_0633 PF03466 LysR substrate binding domain Dsui_0633 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family Dsui_0634 PF00892 EamA-like transporter family Dsui_0635 PF00497 Bacterial extracellular solute-binding proteins, family 3 Dsui_0636 PF00528 Binding-protein-dependent transport system inner membrane component Dsui_0637 PF00528 Binding-protein-dependent transport system inner membrane component Dsui_0638 PF00005 ABC transporter Dsui_0640 PF02219 Methylenetetrahydrofolate reductase Dsui_0642 PF05221 S-adenosyl-L-homocysteine hydrolase Dsui_0642 PF00670 S-adenosyl-L-homocysteine hydrolase, NAD binding domain Dsui_0643 PF11871 Domain of unknown function (DUF3391) Dsui_0643 PF01966 HD domain Dsui_0644 PF13193 AMP-binding enzyme C-terminal domain Dsui_0644 PF00501 AMP-binding enzyme Dsui_0645 PF02773 S-adenosylmethionine synthetase, C-terminal domain Dsui_0645 PF00438 S-adenosylmethionine synthetase, N-terminal domain Dsui_0645 PF02772 S-adenosylmethionine synthetase, central domain Dsui_0647 PF03279 Bacterial lipid A biosynthesis acyltransferase Dsui_0649 PF01678 Diaminopimelate epimerase Dsui_0651 PF00589 Phage integrase family Dsui_0651 PF02899 Phage integrase, N-terminal SAM-like domain Dsui_0653 PF17785 PUA-like domain Dsui_0653 PF10672 S-adenosylmethionine-dependent methyltransferase Dsui_0655 PF09997 Predicted membrane protein (DUF2238) Dsui_0656 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase Dsui_0656 PF09078 CheY binding Dsui_0656 PF02895 Signal transducing histidine kinase, homodimeric domain Dsui_0656 PF01627 Hpt domain Dsui_0656 PF01584 CheW-like domain Dsui_0657 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain Dsui_0657 PF13675 Type IV pili methyl-accepting chemotaxis transducer N-term Dsui_0659 PF00072 Response regulator receiver domain Dsui_0660 PF00072 Response regulator receiver domain Dsui_0661 PF00301 Rubredoxin Dsui_0662 PF08543 Phosphomethylpyrimidine kinase Dsui_0663 PF02581 Thiamine monophosphate synthase Dsui_0664 PF00202 Aminotransferase class-III Dsui_0665 PF03976 Polyphosphate kinase 2 (PPK2) Dsui_0671 PF00491 Arginase family Dsui_0672 PF03109 ABC1 family Dsui_0673 PF05746 DALR anticodon binding domain Dsui_0673 PF00750 tRNA synthetases class I (R) Dsui_0673 PF03485 Arginyl tRNA synthetase N terminal domain Dsui_0675 PF13462 Thioredoxin Dsui_0676 PF00106 short chain dehydrogenase Dsui_0679 PF02630 SCO1/SenC Dsui_0681 PF01497 Periplasmic binding protein Dsui_0682 PF01812 5-formyltetrahydrofolate cyclo-ligase family Dsui_0683 PF01464 Transglycosylase SLT domain Dsui_0683 PF14718 Soluble lytic murein transglycosylase L domain Dsui_0685 PF00043 Glutathione S-transferase, C-terminal domain Dsui_0685 PF13417 Glutathione S-transferase, N-terminal domain Dsui_0686 PF01966 HD domain Dsui_0686 PF12627 Probable RNA and SrmB- binding site of polymerase A Dsui_0686 PF01743 Poly A polymerase head domain Dsui_0688 PF00043 Glutathione S-transferase, C-terminal domain Dsui_0688 PF02798 Glutathione S-transferase, N-terminal domain Dsui_0695 PF01171 PP-loop family Dsui_0696 PF16701 Adenylate cyclase regulatory domain Dsui_0696 PF00211 Adenylate and Guanylate cyclase catalytic domain Dsui_0697 PF03793 PASTA domain Dsui_0697 PF00069 Protein kinase domain Dsui_0701 PF02603 HPr Serine kinase N terminus Dsui_0701 PF07475 HPr Serine kinase C-terminal domain Dsui_0702 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 Dsui_0703 PF02482 Sigma 54 modulation protein / S30EA ribosomal protein Dsui_0704 PF00309 Sigma-54 factor, Activator interacting domain (AID) Dsui_0704 PF04963 Sigma-54 factor, core binding domain Dsui_0704 PF04552 Sigma-54, DNA binding domain Dsui_0705 PF12399 Branched-chain amino acid ATP-binding cassette transporter Dsui_0705 PF00005 ABC transporter Dsui_0706 PF02631 RecX family Dsui_0707 PF00154 recA bacterial DNA recombination protein Dsui_0709 PF00210 Ferritin-like domain Dsui_0710 PF02464 Competence-damaged protein Dsui_0711 PF04608 Phosphatidylglycerophosphatase A Dsui_0712 PF02769 AIR synthase related protein, C-terminal domain Dsui_0712 PF00586 AIR synthase related protein, N-terminal domain Dsui_0713 PF01029 NusB family Dsui_0714 PF00885 6,7-dimethyl-8-ribityllumazine synthase Dsui_0715 PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase Dsui_0715 PF00925 GTP cyclohydrolase II Dsui_0716 PF00677 Lumazine binding domain Dsui_0717 PF00925 GTP cyclohydrolase II Dsui_0718 PF11412 Disulphide bond corrector protein DsbC Dsui_0718 PF02683 Cytochrome C biogenesis protein transmembrane region Dsui_0720 PF01061 ABC-2 type transporter Dsui_0724 PF00005 ABC transporter Dsui_0728 PF00291 Pyridoxal-phosphate dependent enzyme Dsui_0728 PF00585 C-terminal regulatory domain of Threonine dehydratase Dsui_0735 PF09335 SNARE associated Golgi protein Dsui_0738 PF01894 Uncharacterised protein family UPF0047 Dsui_0739 PF07690 Major Facilitator Superfamily Dsui_0740 PF07021 Methionine biosynthesis protein MetW Dsui_0740 PF00561 alpha/beta hydrolase fold Dsui_0741 PF00561 alpha/beta hydrolase fold Dsui_0742 PF05524 PEP-utilising enzyme, N-terminal Dsui_0742 PF00391 PEP-utilising enzyme, mobile domain Dsui_0742 PF02896 PEP-utilising enzyme, TIM barrel domain Dsui_0743 PF00381 PTS HPr component phosphorylation site Dsui_0745 PF02424 ApbE family Dsui_0746 PF02951 Prokaryotic glutathione synthetase, N-terminal domain Dsui_0746 PF02955 Prokaryotic glutathione synthetase, ATP-grasp domain Dsui_0749 PF03707 Bacterial signalling protein N terminal repeat Dsui_0749 PF00563 EAL domain Dsui_0749 PF00990 Diguanylate cyclase, GGDEF domain Dsui_0751 PF12950 TaqI-like C-terminal specificity domain Dsui_0751 PF07669 Eco57I restriction-modification methylase Dsui_0753 PF12848 ABC transporter Dsui_0753 PF00005 ABC transporter Dsui_0757 PF01966 HD domain Dsui_0757 PF11871 Domain of unknown function (DUF3391) Dsui_0758 PF12848 ABC transporter Dsui_0758 PF00005 ABC transporter Dsui_0760 PF00563 EAL domain Dsui_0760 PF00990 Diguanylate cyclase, GGDEF domain Dsui_0760 PF08448 PAS fold Dsui_0762 PF00551 Formyl transferase Dsui_0763 PF00909 Ammonium Transporter Family Dsui_0764 PF00543 Nitrogen regulatory protein P-II Dsui_0766 PF04380 Membrane fusogenic activity Dsui_0768 PF00565 Staphylococcal nuclease homologue Dsui_0771 PF02796 Helix-turn-helix domain of resolvase Dsui_0771 PF00239 Resolvase, N terminal domain Dsui_0775 PF07690 Major Facilitator Superfamily Dsui_0776 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) Dsui_0776 PF00512 His Kinase A (phospho-acceptor) domain Dsui_0776 PF00672 HAMP domain Dsui_0776 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase Dsui_0776 PF01627 Hpt domain Dsui_0776 PF00072 Response regulator receiver domain Dsui_0777 PF00072 Response regulator receiver domain Dsui_0778 PF04355 SmpA / OmlA family Dsui_0779 PF00809 Pterin binding enzyme Dsui_0779 PF02574 Homocysteine S-methyltransferase Dsui_0779 PF02310 B12 binding domain Dsui_0779 PF02965 Vitamin B12 dependent methionine synthase, activation domain Dsui_0779 PF02607 B12 binding domain Dsui_0780 PF00106 short chain dehydrogenase Dsui_0781 PF00175 Oxidoreductase NAD-binding domain Dsui_0781 PF00970 Oxidoreductase FAD-binding domain Dsui_0781 PF00111 2Fe-2S iron-sulfur cluster binding domain Dsui_0782 PF01118 Semialdehyde dehydrogenase, NAD binding domain Dsui_0784 PF07075 Protein of unknown function (DUF1343) Dsui_0789 PF00360 Phytochrome region Dsui_0789 PF00563 EAL domain Dsui_0789 PF00990 Diguanylate cyclase, GGDEF domain Dsui_0789 PF01590 GAF domain Dsui_0790 PF01565 FAD binding domain Dsui_0790 PF02873 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain Dsui_0798 PF00484 Carbonic anhydrase Dsui_0799 PF13336 Acetyl-CoA hydrolase/transferase C-terminal domain Dsui_0799 PF02550 Acetyl-CoA hydrolase/transferase N-terminal domain Dsui_0801 PF00480 ROK family Dsui_0802 PF03475 3-alpha domain Dsui_0802 PF03473 MOSC domain Dsui_0803 PF03707 Bacterial signalling protein N terminal repeat Dsui_0803 PF00990 Diguanylate cyclase, GGDEF domain Dsui_0803 PF00563 EAL domain Dsui_0805 PF00271 Helicase conserved C-terminal domain Dsui_0805 PF17764 3′ DNA-binding domain (3′BD) Dsui_0805 PF18074 Primosomal protein N C-terminal domain Dsui_0805 PF18319 PriA DNA helicase Cys-rich region (CRR) domain Dsui_0805 PF00270 DEAD/DEAH box helicase Dsui_0806 PF01208 Uroporphyrinogen decarboxylase (URO-D) Dsui_0807 PF02386 Cation transport protein Dsui_0808 PF02080 TrkA-C domain Dsui_0808 PF02254 TrkA-N domain Dsui_0809 PF00072 Response regulator receiver domain Dsui_0809 PF00158 Sigma-54 interaction domain Dsui_0809 PF02954 Bacterial regulatory protein, Fis family Dsui_0810 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase Dsui_0810 PF00672 HAMP domain Dsui_0812 PF01189 16S rRNA methyltransferase RsmB/F Dsui_0812 PF01029 NusB family Dsui_0813 PF16916 Dimerisation domain of Zinc Transporter Dsui_0813 PF01545 Cation efflux family Dsui_0815 PF01435 Peptidase family M48 Dsui_0816 PF02911 Formyl transferase, C-terminal domain Dsui_0816 PF00551 Formyl transferase Dsui_0817 PF01327 Polypeptide deformylase Dsui_0819 PF17782 DprA winged helix domain Dsui_0819 PF02481 DNA recombination-mediator protein A Dsui_0820 PF04361 Protein of unknown function (DUF494) Dsui_0821 PF01131 DNA topoisomerase Dsui_0821 PF01751 Toprim domain Dsui_0822 PF00210 Ferritin-like domain Dsui_0823 PF03466 LysR substrate binding domain Dsui_0823 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family Dsui_0824 PF00849 RNA pseudouridylate synthase Dsui_0824 PF01479 S4 domain Dsui_0826 PF08534 Redoxin Dsui_0827 PF01757 Acyltransferase family Dsui_0829 PF01751 Toprim domain Dsui_0829 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase Dsui_0829 PF18053 DNA gyrase B subunit insert domain Dsui_0829 PF00986 DNA gyrase B subunit, carboxyl terminus Dsui_0829 PF00204 DNA gyrase B Dsui_0830 PF02767 DNA polymerase III beta subunit, central domain Dsui_0830 PF02768 DNA polymerase III beta subunit, C-terminal domain Dsui_0830 PF00712 DNA polymerase III beta subunit, N-terminal domain Dsui_0831 PF00308 Bacterial dnaA protein Dsui_0831 PF08299 Bacterial dnaA protein helix-turn-helix Dsui_0831 PF11638 DnaA N-terminal domain Dsui_0833 PF00468 Ribosomal protein L34 Dsui_0834 PF00825 Ribonuclease P Dsui_0835 PF01809 Putative membrane protein insertion efficiency factor Dsui_0836 PF14849 YidC periplasmic domain Dsui_0836 PF02096 60Kd inner membrane protein Dsui_0837 PF12631 MnmE helical domain Dsui_0837 PF01926 50S ribosome-binding GTPase Dsui_0837 PF10396 GTP-binding protein TrmE N-terminus Dsui_0841 PF00005 ABC transporter Dsui_0842 PF00005 ABC transporter Dsui_0842 PF12399 Branched-chain amino acid ATP-binding cassette transporter Dsui_0846 PF13932 GidA associated domain Dsui_0846 PF01134 Glucose inhibited division protein A Dsui_0847 PF02527 rRNA small subunit methyltransferase G Dsui_0848 PF13614 AAA domain Dsui_0849 PF02195 ParB-like nuclease domain Dsui_0849 PF17762 HTH domain found in ParB protein Dsui_0851 PF00119 ATP synthase A chain Dsui_0852 PF00137 ATP synthase subunit C Dsui_0853 PF00430 ATP synthase B/B' CF(0) Dsui_0854 PF00213 ATP synthase delta (OSCP) subunit Dsui_0855 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain Dsui_0855 PF00306 ATP synthase alpha/beta chain, C terminal domain Dsui_0855 PF02874 ATP synthase alpha/beta family, beta-barrel domain Dsui_0856 PF00231 ATP synthase Dsui_0857 PF02874 ATP synthase alpha/beta family, beta-barrel domain Dsui_0857 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain Dsui_0858 PF00401 ATP synthase, Delta/Epsilon chain, long alpha-helix domain Dsui_0858 PF02823 ATP synthase, Delta/Epsilon chain, beta-sandwich domain Dsui_0863 PF00072 Response regulator receiver domain Dsui_0863 PF00486 Transcriptional regulatory protein, C terminal Dsui_0864 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase Dsui_0864 PF11808 Phosphate regulon sensor protein PhoR Dsui_0864 PF00989 PAS fold Dsui_0864 PF00512 His Kinase A (phospho-acceptor) domain Dsui_0867 PF01966 HD domain Dsui_0872 PF03372 Endonuclease/Exonuclease/phosphatase family Dsui_0873 PF00156 Phosphoribosyl transferase domain Dsui_0877 PF12801 4Fe-4S binding domain Dsui_0877 PF11614 IG-like fold at C-terminal of FixG, putative oxidoreductase Dsui_0877 PF13746 4Fe-4S dicluster domain Dsui_0882 PF13473 Cupredoxin-like domain Dsui_0882 PF18793 Nitrous oxide reductase propeller repeat 2 Dsui_0882 PF18764 Nitrous oxide reductase propeller repeat Dsui_0883 PF00155 Aminotransferase class I and II Dsui_0883 PF00392 Bacterial regulatory proteins, gntR family Dsui_0884 PF02934 GatB/GatE catalytic domain Dsui_0884 PF02637 GatB domain Dsui_0886 PF01425 Amidase Dsui_0887 PF02686 Glu-tRNAGln amidotransferase C subunit Dsui_0889 PF04085 rod shape-determining protein MreC Dsui_0890 PF04093 rod shape-determining protein MreD Dsui_0891 PF03717 Penicillin-binding Protein dimerisation domain Dsui_0891 PF00905 Penicillin binding protein transpeptidase domain Dsui_0892 PF01098 Cell cycle protein Dsui_0893 PF03330 Lytic transglycolase Dsui_0893 PF05036 Sporulation related domain Dsui_0894 PF00990 Diguanylate cyclase, GGDEF domain Dsui_0894 PF00563 EAL domain Dsui_0894 PF03707 Bacterial signalling protein N terminal repeat Dsui_0895 PF00543 Nitrogen regulatory protein P-II Dsui_0896 PF00873 AcrB/AcrD/AcrF family Dsui_0897 PF00529 HlyD membrane-fusion protein of T1SS Dsui_0897 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion Dsui_0899 PF00768 D-alanyl-D-alanine carboxypeptidase Dsui_0899 PF07943 Penicillin-binding protein 5, C-terminal domain Dsui_0900 PF01063 Amino-transferase class IV Dsui_0901 PF04359 Protein of unknown function (DUF493) Dsui_0902 PF03099 Biotin/lipoate A/B protein ligase family Dsui_0903 PF04055 Radical SAM superfamily Dsui_0917 PF00665 Integrase core domain Dsui_0917 PF09299 Mu transposase, C-terminal Dsui_0919 PF00072 Response regulator receiver domain Dsui_0921 PF00072 Response regulator receiver domain Dsui_0921 PF01627 Hpt domain Dsui_0921 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase Dsui_0921 PF00512 His Kinase A (phospho-acceptor) domain Dsui_0921 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) Dsui_0921 PF00672 HAMP domain Dsui_0926 PF00206 Lyase Dsui_0926 PF10415 Fumarase C C-terminus Dsui_0927 PF00034 Cytochrome c Dsui_0928 PF11614 IG-like fold at C-terminal of FixG, putative oxidoreductase Dsui_0928 PF12801 4Fe-4S binding domain Dsui_0928 PF13746 4Fe-4S dicluster domain Dsui_0929 PF00753 Metallo-beta-lactamase superfamily Dsui_0930 PF02954 Bacterial regulatory protein, Fis family Dsui_0930 PF00158 Sigma-54 interaction domain Dsui_0930 PF00072 Response regulator receiver domain Dsui_0931 PF00578 AhpC/TSA family Dsui_0931 PF17991 Thioredoxin like C-terminal domain Dsui_0931 PF02683 Cytochrome C biogenesis protein transmembrane region Dsui_0933 PF13361 UvrD-like helicase C-terminal domain Dsui_0933 PF00580 UvrD/REP helicase N-terminal domain Dsui_0935 PF13442 Cytochrome C oxidase, cbb3-type, subunit III Dsui_0938 PF00072 Response regulator receiver domain Dsui_0939 PF00990 Diguanylate cyclase, GGDEF domain Dsui_0939 PF00072 Response regulator receiver domain Dsui_0940 PF01590 GAF domain Dsui_0940 PF00158 Sigma-54 interaction domain Dsui_0940 PF02954 Bacterial regulatory protein, Fis family Dsui_0941 PF03960 ArsC family Dsui_0943 PF04055 Radical SAM superfamily Dsui_0943 PF02579 Dinitrogenase iron-molybdenum cofactor Dsui_0944 PF00037 4Fe-4S binding domain Dsui_0946 PF04319 NifZ domain Dsui_0950 PF01575 MaoC like domain Dsui_0951 PF01073 3-beta hydroxysteroid dehydrogenase/isomerase family Dsui_0952 PF04344 Chemotaxis phosphatase, CheZ Dsui_0953 PF03747 ADP-ribosylglycohydrolase Dsui_0954 PF07357 Dinitrogenase reductase ADP-ribosyltransferase (DRAT) Dsui_0955 PF00142 4Fe-4S iron sulfur cluster binding proteins, NifH/frxC family Dsui_0956 PF00148 Nitrogenase component 1 type Oxidoreductase Dsui_0957 PF00148 Nitrogenase component 1 type Oxidoreductase Dsui_0957 PF11844 Domain of unknown function (DUF3364) Dsui_0958 PF00111 2Fe-2S iron-sulfur cluster binding domain Dsui_0961 PF04545 Sigma-70, region 4 Dsui_0961 PF04542 Sigma-70 region 2 Dsui_0965 PF02308 MgtC family Dsui_0966 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain Dsui_0966 PF00672 HAMP domain Dsui_0968 PF04493 Endonuclease V Dsui_0970 PF00072 Response regulator receiver domain Dsui_0970 PF00990 Diguanylate cyclase, GGDEF domain Dsui_0971 PF00561 alpha/beta hydrolase fold Dsui_0971 PF07167 Poly-beta-hydroxybutyrate polymerase (PhaC) N-terminus Dsui_0973 PF09278 MerR, DNA binding Dsui_0973 PF00376 MerR family regulatory protein Dsui_0975 PF00441 Acyl-CoA dehydrogenase, C-terminal domain Dsui_0975 PF02771 Acyl-CoA dehydrogenase, N-terminal domain Dsui_0975 PF02770 Acyl-CoA dehydrogenase, middle domain Dsui_0976 PF02803 Thiolase, C-terminal domain Dsui_0976 PF00108 Thiolase, N-terminal domain Dsui_0977 PF00441 Acyl-CoA dehydrogenase, C-terminal domain Dsui_0977 PF02770 Acyl-CoA dehydrogenase, middle domain Dsui_0977 PF02771 Acyl-CoA dehydrogenase, N-terminal domain Dsui_0978 PF01323 DSBA-like thioredoxin domain Dsui_0979 PF03641 Possible lysine decarboxylase Dsui_0980 PF01039 Carboxyl transferase domain Dsui_0981 PF00378 Enoyl-CoA hydratase/isomerase Dsui_0982 PF00289 Biotin carboxylase, N-terminal domain Dsui_0982 PF00364 Biotin-requiring enzyme Dsui_0982 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain Dsui_0982 PF02785 Biotin carboxylase C-terminal domain Dsui_0983 PF00563 EAL domain Dsui_0983 PF00990 Diguanylate cyclase, GGDEF domain Dsui_0983 PF08448 PAS fold Dsui_0983 PF08447 PAS fold Dsui_0984 PF00682 HMGL-like Dsui_0987 PF00753 Metallo-beta-lactamase superfamily Dsui_0987 PF16123 Hydroxyacylglutathione hydrolase C-terminus Dsui_0989 PF01546 Peptidase family M20/M25/M40 Dsui_0989 PF07687 Peptidase dimerisation domain Dsui_0990 PF03668 P-loop ATPase protein family Dsui_0993 PF02441 Flavoprotein Dsui_0996 PF01464 Transglycosylase SLT domain Dsui_0996 PF11873 Membrane-bound lytic murein transglycosylase C, N-terminal domain Dsui_0997 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain Dsui_0997 PF00672 HAMP domain Dsui_0997 PF17202 Single cache domain 3 Dsui_0998 PF10576 Iron-sulfur binding domain of endonuclease III Dsui_0998 PF00633 Helix-hairpin-helix motif Dsui_0998 PF14815 NUDIX domain Dsui_0998 PF00730 HhH-GPD superfamily base excision DNA repair protein Dsui_0999 PF07726 ATPase family associated with various cellular activities (AAA) Dsui_0999 PF17863 AAA lid domain Dsui_1003 PF02222 ATP-grasp domain Dsui_1003 PF01370 NAD dependent epimerase/dehydratase family Dsui_1004 PF01613 Flavin reductase like domain Dsui_1006 PF03466 LysR substrate binding domain Dsui_1006 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family Dsui_1009 PF01627 Hpt domain Dsui_1009 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase Dsui_1009 PF00512 His Kinase A (phospho-acceptor) domain Dsui_1009 PF00672 HAMP domain Dsui_1009 PF00072 Response regulator receiver domain Dsui_1009 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) Dsui_1010 PF13458 Periplasmic binding protein Dsui_1011 PF03707 Bacterial signalling protein N terminal repeat Dsui_1011 PF00990 Diguanylate cyclase, GGDEF domain Dsui_1011 PF00563 EAL domain Dsui_1013 PF02597 ThiS family Dsui_1013 PF05690 Thiazole biosynthesis protein ThiG Dsui_1014 PF05690 Thiazole biosynthesis protein ThiG Dsui_1016 PF02390 Putative methyltransferase Dsui_1021 PF07992 Pyridine nucleotide-disulphide oxidoreductase Dsui_1022 PF18075 FtsX extracellular domain Dsui_1023 PF00005 ABC transporter Dsui_1024 PF00448 SRP54-type protein, GTPase domain Dsui_1024 PF02881 SRP54-type protein, helical bundle domain Dsui_1025 PF00675 Insulinase (Peptidase family M16) Dsui_1025 PF05193 Peptidase M16 inactive domain Dsui_1026 PF05193 Peptidase M16 inactive domain Dsui_1028 PF01467 Cytidylyltransferase-like Dsui_1029 PF00037 4Fe-4S binding domain Dsui_1030 PF00350 Dynamin family Dsui_1031 PF06827 Zinc finger found in FPG and IleRS Dsui_1031 PF06831 Formamidopyrimidine-DNA glycosylase H2TH domain Dsui_1031 PF01149 Formamidopyrimidine-DNA glycosylase N-terminal domain Dsui_1034 PF08544 GHMP kinases C terminal Dsui_1034 PF00288 GHMP kinases N terminal domain Dsui_1036 PF13793 N-terminal domain of ribose phosphate pyrophosphokinase Dsui_1036 PF14572 Phosphoribosyl synthetase-associated domain Dsui_1037 PF01386 Ribosomal L25p family Dsui_1037 PF14693 Ribosomal protein TL5, C-terminal domain Dsui_1038 PF01195 Peptidyl-tRNA hydrolase Dsui_1039 PF06071 Protein of unknown function (DUF933) Dsui_1039 PF01926 50S ribosome-binding GTPase Dsui_1040 PF00749 tRNA synthetases class I (E and Q), catalytic domain Dsui_1041 PF13091 PLD-like domain Dsui_1042 PF03372 Endonuclease/Exonuclease/phosphatase family Dsui_1043 PF02445 Quinolinate synthetase A protein Dsui_1050 PF00512 His Kinase A (phospho-acceptor) domain Dsui_1050 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase Dsui_1050 PF00989 PAS fold Dsui_1051 PF02954 Bacterial regulatory protein, Fis family Dsui_1051 PF00072 Response regulator receiver domain Dsui_1051 PF00158 Sigma-54 interaction domain Dsui_1052 PF02237 Biotin protein ligase C terminal domain Dsui_1052 PF03099 Biotin/lipoate A/B protein ligase family Dsui_1053 PF03309 Type III pantothenate kinase Dsui_1054 PF00291 Pyridoxal-phosphate dependent enzyme Dsui_1056 PF01121 Dephospho-CoA kinase Dsui_1057 PF07072 Cell division protein Dsui_1058 PF03884 DNA gyrase inhibitor YacG Dsui_1059 PF00293 NUDIX domain Dsui_1061 PF03562 MltA specific insert domain Dsui_1061 PF06725 3D domain Dsui_1062 PF00909 Ammonium Transporter Family Dsui_1064 PF09278 MerR, DNA binding Dsui_1064 PF00376 MerR family regulatory protein Dsui_1065 PF00403 Heavy-metal-associated domain Dsui_1067 PF00672 HAMP domain Dsui_1067 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase Dsui_1067 PF00512 His Kinase A (phospho-acceptor) domain Dsui_1068 PF00486 Transcriptional regulatory protein, C terminal Dsui_1068 PF00072 Response regulator receiver domain Dsui_1073 PF13533 Biotin-lipoyl like Dsui_1074 PF00873 AcrB/AcrD/AcrF family Dsui_1076 PF04945 YHS domain Dsui_1080 PF00460 Flagella basal body rod protein Dsui_1081 PF11525 Copper resistance protein K Dsui_1085 PF08721 TnsA endonuclease C terminal Dsui_1085 PF08722 TnsA endonuclease N terminal Dsui_1087 PF11426 Tn7 transposition regulator TnsC Dsui_1087 PF13401 AAA domain Dsui_1090 PF17200 Single Cache domain 2 Dsui_1090 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain Dsui_1090 PF00672 HAMP domain Dsui_1091 PF10411 Disulfide bond isomerase protein N-terminus Dsui_1091 PF13098 Thioredoxin-like domain Dsui_1092 PF01494 FAD binding domain Dsui_1094 PF01202 Shikimate kinase Dsui_1095 PF01761 3-dehydroquinate synthase Dsui_1096 PF01493 GXGXG motif Dsui_1096 PF01645 Conserved region in glutamate synthase Dsui_1096 PF04898 Glutamate synthase central domain Dsui_1096 PF00310 Glutamine amidotransferases class-II Dsui_1097 PF07992 Pyridine nucleotide-disulphide oxidoreductase Dsui_1097 PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster Dsui_1099 PF12804 MobA-like NTP transferase domain Dsui_1099 PF00132 Bacterial transferase hexapeptide (six repeats) Dsui_1101 PF01380 SIS domain Dsui_1103 PF12833 Helix-turn-helix domain Dsui_1103 PF12625 Arabinose-binding domain of AraC transcription regulator, N-term Dsui_1105 PF02310 B12 binding domain Dsui_1105 PF01642 Methylmalonyl-CoA mutase Dsui_1108 PF00501 AMP-binding enzyme Dsui_1109 PF00005 ABC transporter Dsui_1109 PF12399 Branched-chain amino acid ATP-binding cassette transporter Dsui_1110 PF02653 Branched-chain amino acid transport system / permease component Dsui_1113 PF00005 ABC transporter Dsui_1115 PF02515 CoA-transferase family III Dsui_1116 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain Dsui_1116 PF00672 HAMP domain Dsui_1116 PF12729 Four helix bundle sensory module for signal transduction Dsui_1117 PF01814 Hemerythrin HHE cation binding domain Dsui_1119 PF00255 Glutathione peroxidase Dsui_1120 PF02630 SCO1/SenC Dsui_1121 PF04545 Sigma-70, region 4 Dsui_1121 PF04542 Sigma-70 region 2 Dsui_1121 PF00140 Sigma-70 factor, region 1.2 Dsui_1122 PF00920 Dehydratase family Dsui_1123 PF00672 HAMP domain Dsui_1123 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain Dsui_1124 PF01790 Prolipoprotein diacylglyceryl transferase Dsui_1127 PF00589 Phage integrase family Dsui_1128 PF02321 Outer membrane efflux protein Dsui_1130 PF00873 AcrB/AcrD/AcrF family Dsui_1134 PF07690 Major Facilitator Superfamily Dsui_1135 PF00460 Flagella basal body rod protein Dsui_1136 PF09828 Chromate resistance exported protein Dsui_1139 PF09828 Chromate resistance exported protein Dsui_1145 PF00589 Phage integrase family Dsui_1145 PF02899 Phage integrase, N-terminal SAM-like domain Dsui_1146 PF03824 High-affinity nickel-transport protein Dsui_1147 PF00512 His Kinase A (phospho-acceptor) domain Dsui_1147 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase Dsui_1148 PF01402 Ribbon-helix-helix protein, copG family Dsui_1148 PF08753 NikR C terminal nickel binding domain Dsui_1149 PF01435 Peptidase family M48 Dsui_1151 PF03466 LysR substrate binding domain Dsui_1151 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family Dsui_1152 PF00374 Nickel-dependent hydrogenase Dsui_1153 PF01058 NADH ubiquinone oxidoreductase, 20 Kd subunit Dsui_1153 PF14720 NiFe/NiFeSe hydrogenase small subunit C-terminal Dsui_1154 PF00158 Sigma-54 interaction domain Dsui_1154 PF00072 Response regulator receiver domain Dsui_1154 PF02954 Bacterial regulatory protein, Fis family Dsui_1155 PF00378 Enoyl-CoA hydratase/isomerase Dsui_1155 PF02911 Formyl transferase, C-terminal domain Dsui_1155 PF00551 Formyl transferase Dsui_1156 PF02535 ZIP Zinc transporter Dsui_1158 PF00586 AIR synthase related protein, N-terminal domain Dsui_1158 PF02769 AIR synthase related protein, C-terminal domain Dsui_1159 PF01924 Hydrogenase formation hypA family Dsui_1160 PF01455 HupF/HypC family Dsui_1162 PF17788 HypF Kae1-like domain Dsui_1162 PF07503 HypF finger Dsui_1162 PF01300 Telomere recombination Dsui_1162 PF00708 Acylphosphatase Dsui_1163 PF02492 CobW/HypB/UreG, nucleotide-binding domain Dsui_1164 PF01155 Hydrogenase/urease nickel incorporation, metallochaperone, hypA Dsui_1165 PF00374 Nickel-dependent hydrogenase Dsui_1166 PF00034 Cytochrome c Dsui_1166 PF03150 Di-haem cytochrome c peroxidase Dsui_1167 PF00005 ABC transporter Dsui_1168 PF03379 CcmB protein Dsui_1169 PF01578 Cytochrome C assembly protein Dsui_1170 PF04995 Heme exporter protein D (CcmD) Dsui_1171 PF03100 CcmE Dsui_1172 PF01578 Cytochrome C assembly protein Dsui_1172 PF16327 Cytochrome c-type biogenesis protein CcmF C-terminal Dsui_1173 PF08534 Redoxin Dsui_1174 PF03918 Cytochrome C biogenesis protein Dsui_1176 PF03264 NapC/NirT cytochrome c family, N-terminal region Dsui_1177 PF09459 Ethylbenzene dehydrogenase Dsui_1179 PF01479 S4 domain Dsui_1180 PF02954 Bacterial regulatory protein, Fis family Dsui_1180 PF00072 Response regulator receiver domain Dsui_1181 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase Dsui_1181 PF00512 His Kinase A (phospho-acceptor) domain Dsui_1182 PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain Dsui_1182 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain Dsui_1184 PF01491 Frataxin-like domain Dsui_1185 PF02635 DsrE/DsrF-like family Dsui_1186 PF00912 Transglycosylase Dsui_1186 PF17092 Penicillin-binding protein OB-like domain Dsui_1186 PF00905 Penicillin binding protein transpeptidase domain Dsui_1191 PF07660 Secretin and TonB N terminus short domain Dsui_1191 PF03958 Bacterial type II/III secretion system short domain Dsui_1191 PF00263 Bacterial type II and III secretion system protein Dsui_1191 PF11741 AMIN domain Dsui_1194 PF01938 TRAM domain Dsui_1194 PF04055 Radical SAM superfamily Dsui_1194 PF00919 Uncharacterized protein family UPF0004 Dsui_1195 PF02562 PhoH-like protein Dsui_1196 PF02130 Uncharacterized protein family UPF0054 Dsui_1197 PF03471 Transporter associated domain Dsui_1197 PF00571 CBS domain Dsui_1198 PF00795 Carbon-nitrogen hydrolase Dsui_1199 PF02091 Glycyl-tRNA synthetase alpha subunit Dsui_1200 PF05746 DALR anticodon binding domain Dsui_1200 PF02092 Glycyl-tRNA synthetase beta subunit Dsui_1204 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily Dsui_1205 PF00072 Response regulator receiver domain Dsui_1207 PF08548 Peptidase M10 serralysin C terminal Dsui_1207 PF00353 RTX calcium-binding nonapeptide repeat (4 copies) Dsui_1209 PF04545 Sigma-70, region 4 Dsui_1209 PF04542 Sigma-70 region 2 Dsui_1209 PF00140 Sigma-70 factor, region 1.2 Dsui_1209 PF03979 Sigma-70 factor, region 1.1 Dsui_1209 PF04539 Sigma-70 region 3 Dsui_1209 PF04546 Sigma-70, non-essential region Dsui_1210 PF08275 DNA primase catalytic core, N-terminal domain Dsui_1210 PF08278 DNA primase DnaG DnaB-binding Dsui_1210 PF01807 CHC2 zinc finger Dsui_1210 PF10410 DnaB-helicase binding domain of primase Dsui_1212 PF01165 Ribosomal protein S21 Dsui_1213 PF00814 Glycoprotease family Dsui_1214 PF02660 Glycerol-3-phosphate acyltransferase Dsui_1216 PF04073 Aminoacyl-tRNA editing domain Dsui_1217 PF00589 Phage integrase family Dsui_1217 PF02899 Phage integrase, N-terminal SAM-like domain Dsui_1218 PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain Dsui_1218 PF02805 Metal binding domain of Ada Dsui_1218 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain Dsui_1218 PF12833 Helix-turn-helix domain Dsui_1220 PF00171 Aldehyde dehydrogenase family Dsui_1222 PF06144 DNA polymerase III, delta subunit Dsui_1222 PF14840 Processivity clamp loader gamma complex DNA pol III C-term Dsui_1224 PF13603 Leucyl-tRNA synthetase, Domain 2 Dsui_1224 PF09334 tRNA synthetases class I (M) Dsui_1224 PF08264 Anticodon-binding domain of tRNA Dsui_1224 PF00133 tRNA synthetases class I (I, L, M and V) Dsui_1227 PF13361 UvrD-like helicase C-terminal domain Dsui_1227 PF00580 UvrD/REP helicase N-terminal domain Dsui_1228 PF00072 Response regulator receiver domain Dsui_1229 PF08240 Alcohol dehydrogenase GroES-like domain Dsui_1229 PF00107 Zinc-binding dehydrogenase Dsui_1232 PF03480 Bacterial extracellular solute-binding protein, family 7 Dsui_1233 PF03480 Bacterial extracellular solute-binding protein, family 7 Dsui_1234 PF01523 Putative modulator of DNA gyrase Dsui_1235 PF04751 Protein of unknown function (DUF615) Dsui_1236 PF00994 Probable molybdopterin binding domain Dsui_1238 PF00303 Thymidylate synthase Dsui_1239 PF00342 Phosphoglucose isomerase Dsui_1240 PF00186 Dihydrofolate reductase Dsui_1245 PF01276 Orn/Lys/Arg decarboxylase, major domain Dsui_1245 PF03709 Orn/Lys/Arg decarboxylase, N-terminal domain Dsui_1245 PF03711 Orn/Lys/Arg decarboxylase, C-terminal domain Dsui_1246 PF00692 dUTPase Dsui_1247 PF10609 NUBPL iron-transfer P-loop NTPase Dsui_1248 PF09334 tRNA synthetases class I (M) Dsui_1248 PF01588 Putative tRNA binding domain Dsui_1248 PF08264 Anticodon-binding domain of tRNA Dsui_1250 PF01740 STAS domain Dsui_1250 PF00916 Sulfate permease family Dsui_1251 PF00708 Acylphosphatase Dsui_1253 PF00578 AhpC/TSA family Dsui_1253 PF10417 C-terminal domain of 1-Cys peroxiredoxin Dsui_1254 PF00593 TonB dependent receptor Dsui_1254 PF07715 TonB-dependent Receptor Plug Domain Dsui_1257 PF02811 PHP domain Dsui_1257 PF07733 Bacterial DNA polymerase III alpha NTPase domain Dsui_1257 PF14579 Helix-hairpin-helix motif Dsui_1257 PF17657 Bacterial DNA polymerase III alpha subunit finger domain Dsui_1257 PF01336 OB-fold nucleic acid binding domain Dsui_1258 PF03466 LysR substrate binding domain Dsui_1258 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family Dsui_1259 PF17954 Quercetinase C-terminal cupin domain Dsui_1259 PF02678 Pirin Dsui_1260 PF03358 NADPH-dependent FMN reductase Dsui_1261 PF00072 Response regulator receiver domain Dsui_1262 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component Dsui_1264 PF00300 Histidine phosphatase superfamily (branch 1) Dsui_1265 PF00464 Serine hydroxymethyltransferase Dsui_1266 PF03477 ATP cone domain Dsui_1267 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region Dsui_1267 PF01872 RibD C-terminal domain Dsui_1268 PF00899 ThiF family Dsui_1270 PF13180 PDZ domain Dsui_1270 PF03572 Peptidase family S41 Dsui_1271 PF01551 Peptidase family M23 Dsui_1273 PF00581 Rhodanese-like domain Dsui_1274 PF00462 Glutaredoxin Dsui_1275 PF02556 Preprotein translocase subunit SecB Dsui_1277 PF01210 NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus Dsui_1277 PF07479 NAD-dependent glycerol-3-phosphate dehydrogenase C-terminus Dsui_1278 PF00588 SpoU rRNA Methylase family Dsui_1279 PF05157 Type II secretion system (T2SS), protein E, N-terminal domain Dsui_1279 PF00437 Type II/IV secretion system protein Dsui_1280 PF00482 Type II secretion system (T2SS), protein F Dsui_1281 PF08334 Type II secretion system (T2SS), protein G Dsui_1281 PF07963 Prokaryotic N-terminal methylation motif Dsui_1282 PF07963 Prokaryotic N-terminal methylation motif Dsui_1282 PF00114 Pilin (bacterial filament) Dsui_1283 PF07963 Prokaryotic N-terminal methylation motif Dsui_1283 PF00114 Pilin (bacterial filament) Dsui_1292 PF03958 Bacterial type II/III secretion system short domain Dsui_1292 PF00263 Bacterial type II and III secretion system protein Dsui_1293 PF13401 AAA domain Dsui_1293 PF01471 Putative peptidoglycan binding domain Dsui_1295 PF04932 O-Antigen ligase Dsui_1295 PF15864 Protein glycosylation ligase Dsui_1295 PF11846 Virulence factor membrane-bound polymerase, C-terminal Dsui_1297 PF04055 Radical SAM superfamily Dsui_1297 PF06968 Biotin and Thiamin Synthesis associated domain Dsui_1298 PF08241 Methyltransferase domain Dsui_1299 PF01794 Ferric reductase like transmembrane component Dsui_1300 PF00174 Oxidoreductase molybdopterin binding domain Dsui_1302 PF08281 Sigma-70, region 4 Dsui_1302 PF04542 Sigma-70 region 2 Dsui_1304 PF13442 Cytochrome C oxidase, cbb3-type, subunit III Dsui_1305 PF01926 50S ribosome-binding GTPase Dsui_1306 PF00490 Delta-aminolevulinic acid dehydratase Dsui_1307 PF00440 Bacterial regulatory proteins, tetR family Dsui_1309 PF00696 Amino acid kinase family Dsui_1310 PF00011 Hsp20/alpha crystallin family Dsui_1312 PF00293 NUDIX domain Dsui_1314 PF00545 ribonuclease Dsui_1315 PF02938 GAD domain Dsui_1315 PF00152 tRNA synthetases class II (D, K and N) Dsui_1315 PF01336 OB-fold nucleic acid binding domain Dsui_1318 PF01478 Type IV leader peptidase family Dsui_1318 PF06750 Bacterial Peptidase A24 N-terminal domain Dsui_1319 PF00482 Type II secretion system (T2SS), protein F Dsui_1320 PF05157 Type II secretion system (T2SS), protein E, N-terminal domain Dsui_1320 PF00437 Type II/IV secretion system protein Dsui_1321 PF01578 Cytochrome C assembly protein Dsui_1322 PF02978 Signal peptide binding domain Dsui_1322 PF02881 SRP54-type protein, helical bundle domain Dsui_1322 PF00448 SRP54-type protein, GTPase domain Dsui_1323 PF11873 Membrane-bound lytic murein transglycosylase C, N-terminal domain Dsui_1323 PF01464 Transglycosylase SLT domain Dsui_1324 PF04073 Aminoacyl-tRNA editing domain Dsui_1324 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) Dsui_1324 PF03129 Anticodon binding domain Dsui_1325 PF00293 NUDIX domain Dsui_1328 PF03232 Ubiquinone biosynthesis protein COQ7 Dsui_1329 PF02566 OsmC-like protein Dsui_1330 PF00572 Ribosomal protein L13 Dsui_1331 PF00380 Ribosomal protein S9/S16 Dsui_1334 PF01521 Iron-sulphur cluster biosynthesis Dsui_1335 PF01551 Peptidase family M23 Dsui_1335 PF01476 LysM domain Dsui_1341 PF01625 Peptide methionine sulfoxide reductase Dsui_1342 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase Dsui_1343 PF00561 alpha/beta hydrolase fold Dsui_1344 PF00753 Metallo-beta-lactamase superfamily Dsui_1345 PF01544 CorA-like Mg2+ transporter protein Dsui_1346 PF00899 ThiF family Dsui_1348 PF01814 Hemerythrin HHE cation binding domain Dsui_1351 PF00270 DEAD/DEAH box helicase Dsui_1351 PF03880 DbpA RNA binding domain Dsui_1351 PF00271 Helicase conserved C-terminal domain Dsui_1351 PF12343 Cold shock protein DEAD box A Dsui_1352 PF01575 MaoC like domain Dsui_1354 PF00392 Bacterial regulatory proteins, gntR family Dsui_1354 PF00155 Aminotransferase class I and II Dsui_1358 PF08525 Opacity-associated protein A N-terminal motif Dsui_1358 PF01476 LysM domain Dsui_1358 PF01551 Peptidase family M23 Dsui_1359 PF00215 Orotidine 5'-phosphate decarboxylase / HUMPS family Dsui_1361 PF00990 Diguanylate cyclase, GGDEF domain Dsui_1361 PF08447 PAS fold Dsui_1361 PF08448 PAS fold Dsui_1361 PF13426 PAS domain Dsui_1361 PF05231 MASE1 Dsui_1361 PF00563 EAL domain Dsui_1362 PF09345 Domain of unknown function (DUF1987) Dsui_1364 PF13675 Type IV pili methyl-accepting chemotaxis transducer N-term Dsui_1364 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase Dsui_1364 PF00672 HAMP domain Dsui_1364 PF07730 Histidine kinase Dsui_1366 PF03950 tRNA synthetases class I (E and Q), anti-codon binding domain Dsui_1366 PF00749 tRNA synthetases class I (E and Q), catalytic domain Dsui_1367 PF02537 CrcB-like protein, Camphor Resistance (CrcB) Dsui_1371 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family Dsui_1371 PF03466 LysR substrate binding domain Dsui_1372 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain Dsui_1372 PF17200 Single Cache domain 2 Dsui_1372 PF00672 HAMP domain Dsui_1373 PF00270 DEAD/DEAH box helicase Dsui_1373 PF04408 Helicase associated domain (HA2) Dsui_1373 PF00271 Helicase conserved C-terminal domain Dsui_1373 PF07717 Oligonucleotide/oligosaccharide-binding (OB)-fold Dsui_1373 PF11898 Domain of unknown function (DUF3418) Dsui_1376 PF09361 Phasin protein Dsui_1378 PF00378 Enoyl-CoA hydratase/isomerase Dsui_1379 PF03968 OstA-like protein Dsui_1382 PF00571 CBS domain Dsui_1382 PF01380 SIS domain Dsui_1383 PF00999 Sodium/hydrogen exchanger family Dsui_1383 PF02080 TrkA-C domain Dsui_1383 PF02254 TrkA-N domain Dsui_1386 PF00211 Adenylate and Guanylate cyclase catalytic domain Dsui_1392 PF00482 Type II secretion system (T2SS), protein F Dsui_1393 PF00437 Type II/IV secretion system protein Dsui_1395 PF00263 Bacterial type II and III secretion system protein Dsui_1395 PF03958 Bacterial type II/III secretion system short domain Dsui_1396 PF13401 AAA domain Dsui_1396 PF01471 Putative peptidoglycan binding domain Dsui_1397 PF00158 Sigma-54 interaction domain Dsui_1397 PF00072 Response regulator receiver domain Dsui_1397 PF02954 Bacterial regulatory protein, Fis family Dsui_1398 PF00005 ABC transporter Dsui_1399 PF02405 Permease MlaE Dsui_1400 PF02470 MlaD protein Dsui_1401 PF04333 MlaA lipoprotein Dsui_1403 PF13466 STAS domain Dsui_1404 PF00005 ABC transporter Dsui_1405 PF01061 ABC-2 type transporter Dsui_1406 PF01722 BolA-like protein Dsui_1407 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) Dsui_1410 PF01634 ATP phosphoribosyltransferase Dsui_1411 PF00815 Histidinol dehydrogenase Dsui_1414 PF00155 Aminotransferase class I and II Dsui_1415 PF00475 Imidazoleglycerol-phosphate dehydratase Dsui_1416 PF00117 Glutamine amidotransferase class-I Dsui_1417 PF00977 Histidine biosynthesis protein Dsui_1418 PF00977 Histidine biosynthesis protein Dsui_1419 PF01502 Phosphoribosyl-AMP cyclohydrolase Dsui_1420 PF01503 Phosphoribosyl-ATP pyrophosphohydrolase Dsui_1422 PF02416 mttA/Hcf106 family Dsui_1423 PF02416 mttA/Hcf106 family Dsui_1424 PF00902 Sec-independent protein translocase protein (TatC) Dsui_1425 PF13230 Glutamine amidotransferases class-II Dsui_1426 PF17820 PDZ domain Dsui_1426 PF13180 PDZ domain Dsui_1427 PF01784 NIF3 (NGG1p interacting factor 3) Dsui_1428 PF01557 Fumarylacetoacetate (FAA) hydrolase family Dsui_1429 PF00990 Diguanylate cyclase, GGDEF domain Dsui_1429 PF00563 EAL domain Dsui_1429 PF03707 Bacterial signalling protein N terminal repeat Dsui_1430 PF01590 GAF domain Dsui_1430 PF00990 Diguanylate cyclase, GGDEF domain Dsui_1430 PF00360 Phytochrome region Dsui_1430 PF00563 EAL domain Dsui_1432 PF00072 Response regulator receiver domain Dsui_1432 PF01339 CheB methylesterase Dsui_1433 PF03975 CheD chemotactic sensory transduction Dsui_1434 PF01739 CheR methyltransferase, SAM binding domain Dsui_1434 PF03705 CheR methyltransferase, all-alpha domain Dsui_1435 PF01584 CheW-like domain Dsui_1436 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain Dsui_1436 PF02743 Cache domain Dsui_1436 PF00672 HAMP domain Dsui_1437 PF01584 CheW-like domain Dsui_1437 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase Dsui_1437 PF01627 Hpt domain Dsui_1437 PF02895 Signal transducing histidine kinase, homodimeric domain Dsui_1439 PF00672 HAMP domain Dsui_1439 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain Dsui_1442 PF01554 MatE Dsui_1445 PF08442 ATP-grasp domain Dsui_1445 PF00549 CoA-ligase Dsui_1446 PF00549 CoA-ligase Dsui_1446 PF02629 CoA binding domain Dsui_1447 PF03741 Integral membrane protein TerC family Dsui_1448 PF02423 Ornithine cyclodeaminase/mu-crystallin family Dsui_1449 PF00069 Protein kinase domain Dsui_1449 PF03793 PASTA domain Dsui_1451 PF00498 FHA domain Dsui_1452 PF00211 Adenylate and Guanylate cyclase catalytic domain Dsui_1454 PF07885 Ion channel Dsui_1454 PF00027 Cyclic nucleotide-binding domain Dsui_1455 PF05157 Type II secretion system (T2SS), protein E, N-terminal domain Dsui_1455 PF00437 Type II/IV secretion system protein Dsui_1457 PF00114 Pilin (bacterial filament) Dsui_1457 PF07963 Prokaryotic N-terminal methylation motif Dsui_1461 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion Dsui_1462 PF00005 ABC transporter Dsui_1463 PF00158 Sigma-54 interaction domain Dsui_1463 PF01590 GAF domain Dsui_1463 PF02954 Bacterial regulatory protein, Fis family Dsui_1464 PF00171 Aldehyde dehydrogenase family Dsui_1465 PF02696 Uncharacterized ACR, YdiU/UPF0061 family Dsui_1467 PF02687 FtsX-like permease family Dsui_1467 PF00005 ABC transporter Dsui_1467 PF12704 MacB-like periplasmic core domain Dsui_1469 PF02261 Aspartate decarboxylase Dsui_1470 PF02569 Pantoate-beta-alanine ligase Dsui_1471 PF02548 Ketopantoate hydroxymethyltransferase Dsui_1472 PF02223 Thymidylate kinase Dsui_1473 PF02743 Cache domain Dsui_1473 PF00672 HAMP domain Dsui_1473 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain Dsui_1490 PF12728 Helix-turn-helix domain Dsui_1491 PF00011 Hsp20/alpha crystallin family Dsui_1492 PF17871 AAA lid domain Dsui_1492 PF02861 Clp amino terminal domain, pathogenicity island component Dsui_1492 PF10431 C-terminal, D2-small domain, of ClpB protein Dsui_1492 PF07724 AAA domain (Cdc48 subfamily) Dsui_1492 PF00004 ATPase family associated with various cellular activities (AAA) Dsui_1493 PF13396 Phospholipase_D-nuclease N-terminal Dsui_1493 PF13091 PLD-like domain Dsui_1494 PF00004 ATPase family associated with various cellular activities (AAA) Dsui_1494 PF01434 Peptidase family M41 Dsui_1494 PF17862 AAA+ lid domain Dsui_1500 PF00085 Thioredoxin Dsui_1501 PF00990 Diguanylate cyclase, GGDEF domain Dsui_1501 PF03707 Bacterial signalling protein N terminal repeat Dsui_1501 PF00563 EAL domain Dsui_1503 PF01435 Peptidase family M48 Dsui_1504 PF00595 PDZ domain Dsui_1507 PF00665 Integrase core domain Dsui_1508 PF01695 IstB-like ATP binding protein Dsui_1510 PF13936 Helix-turn-helix domain Dsui_1510 PF00665 Integrase core domain Dsui_1512 PF03600 Citrate transporter Dsui_1514 PF01288 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK) Dsui_1515 PF01743 Poly A polymerase head domain Dsui_1515 PF12626 Polymerase A arginine-rich C-terminus Dsui_1515 PF12627 Probable RNA and SrmB- binding site of polymerase A Dsui_1517 PF00308 Bacterial dnaA protein Dsui_1518 PF01594 AI-2E family transporter Dsui_1520 PF00034 Cytochrome c Dsui_1522 PF03793 PASTA domain Dsui_1522 PF00069 Protein kinase domain Dsui_1523 PF07690 Major Facilitator Superfamily Dsui_1528 PF00512 His Kinase A (phospho-acceptor) domain Dsui_1528 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase Dsui_1528 PF00672 HAMP domain Dsui_1529 PF00486 Transcriptional regulatory protein, C terminal Dsui_1529 PF00072 Response regulator receiver domain Dsui_1531 PF00563 EAL domain Dsui_1531 PF00990 Diguanylate cyclase, GGDEF domain Dsui_1531 PF03707 Bacterial signalling protein N terminal repeat Dsui_1533 PF02600 Disulfide bond formation protein DsbB Dsui_1534 PF00471 Ribosomal protein L33 Dsui_1535 PF00830 Ribosomal L28 family Dsui_1537 PF04002 RadC-like JAB domain Dsui_1538 PF02441 Flavoprotein Dsui_1538 PF04127 DNA / pantothenate metabolism flavoprotein Dsui_1539 PF00692 dUTPase Dsui_1540 PF09242 Flavocytochrome c sulphide dehydrogenase, flavin-binding Dsui_1540 PF07992 Pyridine nucleotide-disulphide oxidoreductase Dsui_1540 PF10518 TAT (twin-arginine translocation) pathway signal sequence Dsui_1542 PF00924 Mechanosensitive ion channel Dsui_1542 PF12795 Mechanosensitive ion channel porin domain Dsui_1542 PF12794 Mechanosensitive ion channel inner membrane domain 1 Dsui_1543 PF01189 16S rRNA methyltransferase RsmB/F Dsui_1543 PF01029 NusB family Dsui_1545 PF00551 Formyl transferase Dsui_1547 PF09335 SNARE associated Golgi protein Dsui_1548 PF00072 Response regulator receiver domain Dsui_1549 PF00512 His Kinase A (phospho-acceptor) domain Dsui_1549 PF01590 GAF domain Dsui_1549 PF00360 Phytochrome region Dsui_1549 PF08446 PAS fold Dsui_1549 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase Dsui_1550 PF00990 Diguanylate cyclase, GGDEF domain Dsui_1550 PF08447 PAS fold Dsui_1550 PF00563 EAL domain Dsui_1550 PF08448 PAS fold Dsui_1551 PF08676 MutL C terminal dimerisation domain Dsui_1551 PF01119 DNA mismatch repair protein, C-terminal domain Dsui_1554 PF00072 Response regulator receiver domain Dsui_1554 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase Dsui_1554 PF00672 HAMP domain Dsui_1554 PF00512 His Kinase A (phospho-acceptor) domain Dsui_1554 PF01627 Hpt domain Dsui_1554 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) Dsui_1555 PF00873 AcrB/AcrD/AcrF family Dsui_1556 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion Dsui_1557 PF00162 Phosphoglycerate kinase Dsui_1558 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain Dsui_1558 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain Dsui_1560 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain Dsui_1560 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain Dsui_1561 PF00456 Transketolase, thiamine diphosphate binding domain Dsui_1561 PF02780 Transketolase, C-terminal domain Dsui_1561 PF02779 Transketolase, pyrimidine binding domain Dsui_1562 PF00485 Phosphoribulokinase / Uridine kinase family Dsui_1563 PF00316 Fructose-1-6-bisphosphatase, N-terminal domain Dsui_1564 PF03707 Bacterial signalling protein N terminal repeat Dsui_1564 PF00990 Diguanylate cyclase, GGDEF domain Dsui_1564 PF00563 EAL domain Dsui_1565 PF08448 PAS fold Dsui_1565 PF00990 Diguanylate cyclase, GGDEF domain Dsui_1565 PF00563 EAL domain Dsui_1566 PF00459 Inositol monophosphatase family Dsui_1568 PF04452 RNA methyltransferase Dsui_1569 PF03976 Polyphosphate kinase 2 (PPK2) Dsui_1570 PF00583 Acetyltransferase (GNAT) family Dsui_1570 PF00696 Amino acid kinase family Dsui_1571 PF04362 Bacterial Fe(2+) trafficking Dsui_1573 PF01895 PhoU domain Dsui_1574 PF06026 Ribose 5-phosphate isomerase A (phosphoriboisomerase A) Dsui_1576 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain Dsui_1576 PF07992 Pyridine nucleotide-disulphide oxidoreductase Dsui_1577 PF00364 Biotin-requiring enzyme Dsui_1577 PF02817 e3 binding domain Dsui_1577 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) Dsui_1578 PF00456 Transketolase, thiamine diphosphate binding domain Dsui_1578 PF17831 Pyruvate dehydrogenase E1 component middle domain Dsui_1580 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase Dsui_1580 PF00512 His Kinase A (phospho-acceptor) domain Dsui_1580 PF00989 PAS fold Dsui_1581 PF00196 Bacterial regulatory proteins, luxR family Dsui_1581 PF00072 Response regulator receiver domain Dsui_1582 PF02754 Cysteine-rich domain Dsui_1583 PF13183 4Fe-4S dicluster domain Dsui_1583 PF02589 LUD domain Dsui_1583 PF11870 Domain of unknown function (DUF3390) Dsui_1584 PF02589 LUD domain Dsui_1585 PF04166 Pyridoxal phosphate biosynthetic protein PdxA Dsui_1586 PF00639 PPIC-type PPIASE domain Dsui_1586 PF09312 SurA N-terminal domain Dsui_1587 PF04453 LPS transport system D Dsui_1588 PF01636 Phosphotransferase enzyme family Dsui_1589 PF00483 Nucleotidyl transferase Dsui_1591 PF05195 Aminopeptidase P, N-terminal domain Dsui_1591 PF00557 Metallopeptidase family M24 Dsui_1592 PF01494 FAD binding domain Dsui_1593 PF01207 Dihydrouridine synthase (Dus) Dsui_1594 PF02954 Bacterial regulatory protein, Fis family Dsui_1595 PF02142 MGS-like domain Dsui_1595 PF01808 AICARFT/IMPCHase bienzyme Dsui_1596 PF02843 Phosphoribosylglycinamide synthetase, C domain Dsui_1596 PF02844 Phosphoribosylglycinamide synthetase, N domain Dsui_1596 PF01071 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain Dsui_1597 PF01218 Coproporphyrinogen III oxidase Dsui_1600 PF04375 HemX, putative uroporphyrinogen-III C-methyltransferase Dsui_1601 PF02602 Uroporphyrinogen-III synthase HemD Dsui_1602 PF01379 Porphobilinogen deaminase, dipyromethane cofactor binding domain Dsui_1602 PF03900 Porphobilinogen deaminase, C-terminal domain Dsui_1603 PF00311 Phosphoenolpyruvate carboxylase Dsui_1605 PF00501 AMP-binding enzyme Dsui_1605 PF13193 AMP-binding enzyme C-terminal domain Dsui_1606 PF13180 PDZ domain Dsui_1616 PF00881 Nitroreductase family Dsui_1617 PF00072 Response regulator receiver domain Dsui_1617 PF00486 Transcriptional regulatory protein, C terminal Dsui_1618 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase Dsui_1618 PF00512 His Kinase A (phospho-acceptor) domain Dsui_1618 PF08521 Two-component sensor kinase N-terminal Dsui_1619 PF00884 Sulfatase Dsui_1619 PF08019 Phosphoethanolamine transferase EptA/EptB Dsui_1621 PF01219 Prokaryotic diacylglycerol kinase Dsui_1622 PF17755 UvrA DNA-binding domain Dsui_1622 PF17760 UvrA interaction domain Dsui_1624 PF00106 short chain dehydrogenase Dsui_1625 PF00403 Heavy-metal-associated domain Dsui_1627 PF00115 Cytochrome C and Quinol oxidase polypeptide I Dsui_1630 PF13442 Cytochrome C oxidase, cbb3-type, subunit III Dsui_1630 PF14715 N-terminal domain of cytochrome oxidase-cbb3, FixP Dsui_1631 PF13746 4Fe-4S dicluster domain Dsui_1631 PF11614 IG-like fold at C-terminal of FixG, putative oxidoreductase Dsui_1631 PF12801 4Fe-4S binding domain Dsui_1634 PF00582 Universal stress protein family Dsui_1635 PF00753 Metallo-beta-lactamase superfamily Dsui_1635 PF10996 Beta-Casp domain Dsui_1635 PF07521 Zn-dependent metallo-hydrolase RNA specificity domain Dsui_1636 PF07167 Poly-beta-hydroxybutyrate polymerase (PhaC) N-terminus Dsui_1636 PF00561 alpha/beta hydrolase fold Dsui_1637 PF03060 Nitronate monooxygenase Dsui_1645 PF01814 Hemerythrin HHE cation binding domain Dsui_1646 PF00027 Cyclic nucleotide-binding domain Dsui_1646 PF13545 Crp-like helix-turn-helix domain Dsui_1647 PF06969 HemN C-terminal domain Dsui_1647 PF04055 Radical SAM superfamily Dsui_1650 PF00403 Heavy-metal-associated domain Dsui_1653 PF07670 Nucleoside recognition Dsui_1653 PF02421 Ferrous iron transport protein B Dsui_1653 PF04023 FeoA domain Dsui_1653 PF17910 FeoB cytosolic helical domain Dsui_1653 PF07664 Ferrous iron transport protein B C terminus Dsui_1655 PF03239 Iron permease FTR1 family Dsui_1656 PF13473 Cupredoxin-like domain Dsui_1658 PF10634 Fe2+ transport protein Dsui_1660 PF07715 TonB-dependent Receptor Plug Domain Dsui_1660 PF00593 TonB dependent receptor Dsui_1662 PF00667 FAD binding domain Dsui_1662 PF00175 Oxidoreductase NAD-binding domain Dsui_1662 PF00258 Flavodoxin Dsui_1666 PF13640 2OG-Fe(II) oxygenase superfamily Dsui_1666 PF18331 PKHD-type hydroxylase C-terminal domain Dsui_1667 PF07715 TonB-dependent Receptor Plug Domain Dsui_1667 PF00593 TonB dependent receptor Dsui_1668 PF01070 FMN-dependent dehydrogenase Dsui_1669 PF13180 PDZ domain Dsui_1670 PF00034 Cytochrome c Dsui_1670 PF03150 Di-haem cytochrome c peroxidase Dsui_1671 PF07715 TonB-dependent Receptor Plug Domain Dsui_1677 PF00163 Ribosomal protein S4/S9 N-terminal domain Dsui_1677 PF01479 S4 domain Dsui_1679 PF02514 CobN/Magnesium Chelatase Dsui_1679 PF11965 Domain of unknown function (DUF3479) Dsui_1680 PF07715 TonB-dependent Receptor Plug Domain Dsui_1680 PF00593 TonB dependent receptor Dsui_1682 PF02472 Biopolymer transport protein ExbD/TolR Dsui_1683 PF01618 MotA/TolQ/ExbB proton channel family Dsui_1684 PF03544 Gram-negative bacterial TonB protein C-terminal Dsui_1685 PF00719 Inorganic pyrophosphatase Dsui_1686 PF02540 NAD synthase Dsui_1686 PF00795 Carbon-nitrogen hydrolase Dsui_1687 PF00543 Nitrogen regulatory protein P-II Dsui_1688 PF01713 Smr domain Dsui_1689 PF07992 Pyridine nucleotide-disulphide oxidoreductase Dsui_1690 PF13545 Crp-like helix-turn-helix domain Dsui_1690 PF00027 Cyclic nucleotide-binding domain Dsui_1691 PF09397 Ftsk gamma domain Dsui_1691 PF13491 4TM region of DNA translocase FtsK/SpoIIIE Dsui_1691 PF17854 FtsK alpha domain Dsui_1691 PF01580 FtsK/SpoIIIE family Dsui_1692 PF03548 Outer membrane lipoprotein carrier protein LolA Dsui_1694 PF00004 ATPase family associated with various cellular activities (AAA) Dsui_1694 PF16193 AAA C-terminal domain Dsui_1694 PF12002 MgsA AAA+ ATPase C terminal Dsui_1696 PF02403 Seryl-tRNA synthetase N-terminal domain Dsui_1696 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) Dsui_1697 PF01464 Transglycosylase SLT domain Dsui_1697 PF00497 Bacterial extracellular solute-binding proteins, family 3 Dsui_1704 PF01618 MotA/TolQ/ExbB proton channel family Dsui_1705 PF13677 Membrane MotB of proton-channel complex MotA/MotB Dsui_1705 PF00691 OmpA family Dsui_1706 PF02743 Cache domain Dsui_1706 PF00672 HAMP domain Dsui_1706 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain Dsui_1708 PF01584 CheW-like domain Dsui_1708 PF02895 Signal transducing histidine kinase, homodimeric domain Dsui_1708 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase Dsui_1708 PF01627 Hpt domain Dsui_1708 PF09078 CheY binding Dsui_1709 PF01584 CheW-like domain Dsui_1710 PF08447 PAS fold Dsui_1710 PF08447 PAS fold Dsui_1710 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain Dsui_1710 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain Dsui_1711 PF03705 CheR methyltransferase, all-alpha domain Dsui_1711 PF01739 CheR methyltransferase, SAM binding domain Dsui_1712 PF03975 CheD chemotactic sensory transduction Dsui_1713 PF00072 Response regulator receiver domain Dsui_1713 PF01339 CheB methylesterase Dsui_1714 PF13466 STAS domain Dsui_1715 PF00072 Response regulator receiver domain Dsui_1715 PF01966 HD domain Dsui_1716 PF00672 HAMP domain Dsui_1716 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain Dsui_1717 PF00072 Response regulator receiver domain Dsui_1717 PF01584 CheW-like domain Dsui_1718 PF00072 Response regulator receiver domain Dsui_1718 PF01584 CheW-like domain Dsui_1719 PF00072 Response regulator receiver domain Dsui_1720 PF04344 Chemotaxis phosphatase, CheZ Dsui_1721 PF09078 CheY binding Dsui_1721 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase Dsui_1721 PF01627 Hpt domain Dsui_1721 PF01584 CheW-like domain Dsui_1721 PF02895 Signal transducing histidine kinase, homodimeric domain Dsui_1722 PF01312 FlhB HrpN YscU SpaS Family Dsui_1723 PF00771 FHIPEP family Dsui_1724 PF00448 SRP54-type protein, GTPase domain Dsui_1726 PF04542 Sigma-70 region 2 Dsui_1726 PF04545 Sigma-70, region 4 Dsui_1726 PF04539 Sigma-70 region 3 Dsui_1727 PF01618 MotA/TolQ/ExbB proton channel family Dsui_1728 PF00691 OmpA family Dsui_1728 PF13677 Membrane MotB of proton-channel complex MotA/MotB Dsui_1732 PF00460 Flagella basal body rod protein Dsui_1733 PF00460 Flagella basal body rod protein Dsui_1733 PF06429 Flagellar basal body rod FlgEFG protein C-terminal Dsui_1734 PF13861 FlgD Tudor-like domain Dsui_1734 PF13860 FlgD Ig-like domain Dsui_1734 PF03963 Flagellar hook capping protein - N-terminal region Dsui_1735 PF07559 Flagellar basal body protein FlaE Dsui_1735 PF00460 Flagella basal body rod protein Dsui_1735 PF06429 Flagellar basal body rod FlgEFG protein C-terminal Dsui_1736 PF06429 Flagellar basal body rod FlgEFG protein C-terminal Dsui_1736 PF00460 Flagella basal body rod protein Dsui_1737 PF06429 Flagellar basal body rod FlgEFG protein C-terminal Dsui_1737 PF00460 Flagella basal body rod protein Dsui_1738 PF02107 Flagellar L-ring protein Dsui_1739 PF02119 Flagellar P-ring protein Dsui_1740 PF01832 Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase Dsui_1740 PF10135 Rod binding protein Dsui_1741 PF06429 Flagellar basal body rod FlgEFG protein C-terminal Dsui_1741 PF00460 Flagella basal body rod protein Dsui_1742 PF00669 Bacterial flagellin N-terminal helical region Dsui_1744 PF01311 Bacterial export proteins, family 1 Dsui_1745 PF01313 Bacterial export proteins, family 3 Dsui_1746 PF00813 FliP family Dsui_1747 PF04347 Flagellar biosynthesis protein, FliO Dsui_1748 PF16973 Flagellar motor switch protein FliN N-terminal Dsui_1748 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term Dsui_1749 PF02154 Flagellar motor switch protein FliM Dsui_1749 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term Dsui_1751 PF02120 Flagellar hook-length control protein FliK Dsui_1753 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain Dsui_1753 PF18269 T3SS EscN ATPase C-terminal domain Dsui_1755 PF14841 FliG middle domain Dsui_1755 PF01706 FliG C-terminal domain Dsui_1755 PF14842 FliG N-terminal domain Dsui_1756 PF08345 Flagellar M-ring protein C-terminal Dsui_1756 PF01514 Secretory protein of YscJ/FliF family Dsui_1757 PF09456 RcsC Alpha-Beta-Loop (ABL) Dsui_1757 PF00512 His Kinase A (phospho-acceptor) domain Dsui_1757 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase Dsui_1757 PF00072 Response regulator receiver domain Dsui_1758 PF02954 Bacterial regulatory protein, Fis family Dsui_1758 PF00072 Response regulator receiver domain Dsui_1758 PF00158 Sigma-54 interaction domain Dsui_1759 PF02049 Flagellar hook-basal body complex protein FliE Dsui_1769 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family Dsui_1772 PF00005 ABC transporter Dsui_1772 PF00664 ABC transporter transmembrane region Dsui_1773 PF00005 ABC transporter Dsui_1773 PF00664 ABC transporter transmembrane region Dsui_1774 PF00353 RTX calcium-binding nonapeptide repeat (4 copies) Dsui_1774 PF06594 Haemolysin-type calcium binding protein related domain Dsui_1775 PF00529 HlyD membrane-fusion protein of T1SS Dsui_1776 PF07238 PilZ domain Dsui_1776 PF07317 Flagellar regulator YcgR Dsui_1777 PF01312 FlhB HrpN YscU SpaS Family Dsui_1780 PF02561 Flagellar protein FliS Dsui_1781 PF07195 Flagellar hook-associated protein 2 C-terminus Dsui_1781 PF07196 Flagellin hook IN motif Dsui_1781 PF02465 Flagellar hook-associated protein 2 N-terminus Dsui_1783 PF00700 Bacterial flagellin C-terminal helical region Dsui_1783 PF07196 Flagellin hook IN motif Dsui_1783 PF00669 Bacterial flagellin N-terminal helical region Dsui_1784 PF07196 Flagellin hook IN motif Dsui_1784 PF00669 Bacterial flagellin N-terminal helical region Dsui_1784 PF00700 Bacterial flagellin C-terminal helical region Dsui_1787 PF00535 Glycosyl transferase family 2 Dsui_1789 PF00990 Diguanylate cyclase, GGDEF domain Dsui_1789 PF00072 Response regulator receiver domain Dsui_1791 PF00589 Phage integrase family Dsui_1791 PF13356 Arm DNA-binding domain Dsui_1798 PF01695 IstB-like ATP binding protein Dsui_1800 PF01614 Bacterial transcriptional regulator Dsui_1800 PF09339 IclR helix-turn-helix domain Dsui_1809 PF12169 DNA polymerase III subunits gamma and tau domain III Dsui_1809 PF12168 DNA polymerase III subunits tau domain IV DnaB-binding Dsui_1809 PF12170 DNA polymerase III tau subunit V interacting with alpha Dsui_1810 PF02575 YbaB/EbfC DNA-binding family Dsui_1811 PF02132 RecR protein Dsui_1811 PF13662 Toprim domain Dsui_1812 PF10399 Ubiquitinol-cytochrome C reductase Fe-S subunit TAT signal Dsui_1812 PF00355 Rieske [2Fe-2S] domain Dsui_1813 PF00032 Cytochrome b(C-terminal)/b6/petD Dsui_1813 PF00033 Cytochrome b/b6/petB Dsui_1814 PF02167 Cytochrome C1 family Dsui_1815 PF02798 Glutathione S-transferase, N-terminal domain Dsui_1815 PF00043 Glutathione S-transferase, C-terminal domain Dsui_1816 PF04386 Stringent starvation protein B Dsui_1817 PF00384 Molybdopterin oxidoreductase Dsui_1817 PF01568 Molydopterin dinucleotide binding domain Dsui_1817 PF04879 Molybdopterin oxidoreductase Fe4S4 domain Dsui_1818 PF02885 Glycosyl transferase family, helical bundle domain Dsui_1819 PF01361 Tautomerase enzyme Dsui_1820 PF13458 Periplasmic binding protein Dsui_1821 PF07859 alpha/beta hydrolase fold Dsui_1823 PF00905 Penicillin binding protein transpeptidase domain Dsui_1824 PF03707 Bacterial signalling protein N terminal repeat Dsui_1824 PF00563 EAL domain Dsui_1824 PF00990 Diguanylate cyclase, GGDEF domain Dsui_1825 PF18267 Rubredoxin NAD+ reductase C-terminal domain Dsui_1825 PF01077 Nitrite and sulphite reductase 4Fe-4S domain Dsui_1825 PF04324 BFD-like [2Fe-2S] binding domain Dsui_1825 PF07992 Pyridine nucleotide-disulphide oxidoreductase Dsui_1825 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain Dsui_1826 PF13806 Rieske-like [2Fe-2S] domain Dsui_1828 PF03861 ANTAR domain Dsui_1828 PF08376 Nitrate and nitrite sensing Dsui_1832 PF00528 Binding-protein-dependent transport system inner membrane component Dsui_1833 PF00005 ABC transporter Dsui_1835 PF13439 Glycosyltransferase Family 4 Dsui_1835 PF00534 Glycosyl transferases group 1 Dsui_1836 PF00072 Response regulator receiver domain Dsui_1837 PF00893 Small Multidrug Resistance protein Dsui_1845 PF01384 Phosphate transporter family Dsui_1846 PF02253 Phospholipase A1 Dsui_1848 PF01758 Sodium Bile acid symporter family Dsui_1849 PF01451 Low molecular weight phosphotyrosine protein phosphatase Dsui_1851 PF16527 Two-component sensor protein CpxA, periplasmic domain Dsui_1851 PF00672 HAMP domain Dsui_1851 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase Dsui_1851 PF00512 His Kinase A (phospho-acceptor) domain Dsui_1852 PF00072 Response regulator receiver domain Dsui_1852 PF00486 Transcriptional regulatory protein, C terminal Dsui_1856 PF01361 Tautomerase enzyme Dsui_1858 PF03466 LysR substrate binding domain Dsui_1858 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family Dsui_1860 PF17200 Single Cache domain 2 Dsui_1860 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain Dsui_1860 PF00672 HAMP domain Dsui_1862 PF00196 Bacterial regulatory proteins, luxR family Dsui_1862 PF00072 Response regulator receiver domain Dsui_1863 PF00072 Response regulator receiver domain Dsui_1865 PF00512 His Kinase A (phospho-acceptor) domain Dsui_1865 PF01627 Hpt domain Dsui_1865 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase Dsui_1865 PF00672 HAMP domain Dsui_1865 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) Dsui_1865 PF00072 Response regulator receiver domain Dsui_1866 PF00072 Response regulator receiver domain Dsui_1866 PF00486 Transcriptional regulatory protein, C terminal Dsui_1867 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase Dsui_1867 PF00512 His Kinase A (phospho-acceptor) domain Dsui_1867 PF01627 Hpt domain Dsui_1867 PF00072 Response regulator receiver domain Dsui_1867 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) Dsui_1867 PF00672 HAMP domain Dsui_1868 PF00072 Response regulator receiver domain Dsui_1870 PF02321 Outer membrane efflux protein Dsui_1871 PF00873 AcrB/AcrD/AcrF family Dsui_1872 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion Dsui_1872 PF00529 HlyD membrane-fusion protein of T1SS Dsui_1873 PF00440 Bacterial regulatory proteins, tetR family Dsui_1873 PF08361 MAATS-type transcriptional repressor, C-terminal region Dsui_1874 PF02694 Uncharacterised BCR, YnfA/UPF0060 family Dsui_1876 PF00440 Bacterial regulatory proteins, tetR family Dsui_1876 PF16925 Tetracyclin repressor-like, C-terminal domain Dsui_1877 PF00724 NADH:flavin oxidoreductase / NADH oxidase family Dsui_1878 PF00892 EamA-like transporter family Dsui_1879 PF00296 Luciferase-like monooxygenase Dsui_1881 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain Dsui_1881 PF08447 PAS fold Dsui_1881 PF13426 PAS domain Dsui_1884 PF13426 PAS domain Dsui_1884 PF13188 PAS domain Dsui_1884 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase Dsui_1884 PF00512 His Kinase A (phospho-acceptor) domain Dsui_1884 PF00989 PAS fold Dsui_1885 PF02954 Bacterial regulatory protein, Fis family Dsui_1885 PF00072 Response regulator receiver domain Dsui_1885 PF00158 Sigma-54 interaction domain Dsui_1886 PF00072 Response regulator receiver domain Dsui_1887 PF00072 Response regulator receiver domain Dsui_1887 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase Dsui_1887 PF08448 PAS fold Dsui_1887 PF00512 His Kinase A (phospho-acceptor) domain Dsui_1887 PF13188 PAS domain Dsui_1888 PF12072 Domain of unknown function (DUF3552) Dsui_1888 PF01966 HD domain Dsui_1888 PF00013 KH domain Dsui_1890 PF03707 Bacterial signalling protein N terminal repeat Dsui_1890 PF00563 EAL domain Dsui_1890 PF00990 Diguanylate cyclase, GGDEF domain Dsui_1891 PF13378 Enolase C-terminal domain-like Dsui_1892 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family Dsui_1892 PF03466 LysR substrate binding domain Dsui_1895 PF04011 LemA family Dsui_1896 PF07690 Major Facilitator Superfamily Dsui_1899 PF08032 RNA 2'-O ribose methyltransferase substrate binding Dsui_1899 PF00588 SpoU rRNA Methylase family Dsui_1901 PF00578 AhpC/TSA family Dsui_1901 PF10417 C-terminal domain of 1-Cys peroxiredoxin Dsui_1902 PF13192 Thioredoxin domain Dsui_1902 PF07992 Pyridine nucleotide-disulphide oxidoreductase Dsui_1904 PF00155 Aminotransferase class I and II Dsui_1905 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) Dsui_1905 PF00072 Response regulator receiver domain Dsui_1905 PF01627 Hpt domain Dsui_1905 PF00512 His Kinase A (phospho-acceptor) domain Dsui_1905 PF00672 HAMP domain Dsui_1905 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase Dsui_1906 PF04474 Protein of unknown function (DUF554) Dsui_1907 PF03466 LysR substrate binding domain Dsui_1907 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family Dsui_1908 PF04055 Radical SAM superfamily Dsui_1911 PF02195 ParB-like nuclease domain Dsui_1911 PF17762 HTH domain found in ParB protein Dsui_1912 PF00072 Response regulator receiver domain Dsui_1912 PF02954 Bacterial regulatory protein, Fis family Dsui_1913 PF00512 His Kinase A (phospho-acceptor) domain Dsui_1913 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase Dsui_1915 PF01654 Cytochrome bd terminal oxidase subunit I Dsui_1916 PF02322 Cytochrome bd terminal oxidase subunit II Dsui_1918 PF18381 YcaO cyclodehydratase C-terminal domain Dsui_1918 PF02624 YcaO cyclodehydratase, ATP-ad Mg2+-binding Dsui_1919 PF11965 Domain of unknown function (DUF3479) Dsui_1919 PF02514 CobN/Magnesium Chelatase Dsui_1922 PF00593 TonB dependent receptor Dsui_1922 PF07715 TonB-dependent Receptor Plug Domain Dsui_1923 PF00268 Ribonucleotide reductase, small chain Dsui_1924 PF02867 Ribonucleotide reductase, barrel domain Dsui_1924 PF00317 Ribonucleotide reductase, all-alpha domain Dsui_1924 PF03477 ATP cone domain Dsui_1925 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain Dsui_1925 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain Dsui_1925 PF00205 Thiamine pyrophosphate enzyme, central domain Dsui_1926 PF01842 ACT domain Dsui_1928 PF13442 Cytochrome C oxidase, cbb3-type, subunit III Dsui_1930 PF17805 AsnC-like ligand binding domain Dsui_1931 PF17805 AsnC-like ligand binding domain Dsui_1931 PF13404 AsnC-type helix-turn-helix domain Dsui_1932 PF17805 AsnC-like ligand binding domain Dsui_1933 PF13419 Haloacid dehalogenase-like hydrolase Dsui_1935 PF00691 OmpA family Dsui_1936 PF01979 Amidohydrolase family Dsui_1937 PF00691 OmpA family Dsui_1937 PF01389 OmpA-like transmembrane domain Dsui_1938 PF03989 DNA gyrase C-terminal domain, beta-propeller Dsui_1938 PF00521 DNA gyrase/topoisomerase IV, subunit A Dsui_1939 PF00266 Aminotransferase class-V Dsui_1940 PF00800 Prephenate dehydratase Dsui_1940 PF01842 ACT domain Dsui_1940 PF01817 Chorismate mutase type II Dsui_1942 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) Dsui_1943 PF00575 S1 RNA binding domain Dsui_1944 PF00216 Bacterial DNA-binding protein Dsui_1946 PF18073 Rubredoxin metal binding domain Dsui_1947 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain Dsui_1947 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain Dsui_1947 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain Dsui_1948 PF16363 GDP-mannose 4,6 dehydratase Dsui_1949 PF04321 RmlD substrate binding domain Dsui_1950 PF00483 Nucleotidyl transferase Dsui_1951 PF00908 dTDP-4-dehydrorhamnose 3,5-epimerase Dsui_1952 PF00294 pfkB family carbohydrate kinase Dsui_1953 PF01370 NAD dependent epimerase/dehydratase family Dsui_1954 PF00291 Pyridoxal-phosphate dependent enzyme Dsui_1958 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain Dsui_1958 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) Dsui_1958 PF02824 TGS domain Dsui_1958 PF03129 Anticodon binding domain Dsui_1959 PF05198 Translation initiation factor IF-3, N-terminal domain Dsui_1959 PF00707 Translation initiation factor IF-3, C-terminal domain Dsui_1960 PF01632 Ribosomal protein L35 Dsui_1961 PF00453 Ribosomal protein L20 Dsui_1962 PF01409 tRNA synthetases class II core domain (F) Dsui_1962 PF02912 Aminoacyl tRNA synthetase class II, N-terminal domain Dsui_1963 PF01588 Putative tRNA binding domain Dsui_1963 PF03483 B3/4 domain Dsui_1963 PF03484 tRNA synthetase B5 domain Dsui_1963 PF03147 Ferredoxin-fold anticodon binding domain Dsui_1963 PF17759 Phenylalanyl tRNA synthetase beta chain CLM domain Dsui_1964 PF00216 Bacterial DNA-binding protein Dsui_1967 PF00816 H-NS histone family Dsui_1968 PF01975 Survival protein SurE Dsui_1970 PF01551 Peptidase family M23 Dsui_1970 PF01476 LysM domain Dsui_1971 PF00140 Sigma-70 factor, region 1.2 Dsui_1971 PF04545 Sigma-70, region 4 Dsui_1971 PF04539 Sigma-70 region 3 Dsui_1971 PF04542 Sigma-70 region 2 Dsui_1972 PF13406 Transglycosylase SLT domain Dsui_1973 PF01841 Transglutaminase-like superfamily Dsui_1973 PF11992 Domain of unknown function (DUF3488) Dsui_1973 PF13559 Domain of unknown function (DUF4129) Dsui_1975 PF07726 ATPase family associated with various cellular activities (AAA) Dsui_1975 PF17863 AAA lid domain Dsui_1976 PF00850 Histone deacetylase domain Dsui_1977 PF00701 Dihydrodipicolinate synthetase family Dsui_1978 PF06804 NlpB/DapX lipoprotein Dsui_1979 PF00753 Metallo-beta-lactamase superfamily Dsui_1979 PF16123 Hydroxyacylglutathione hydrolase C-terminus Dsui_1981 PF05958 tRNA (Uracil-5-)-methyltransferase Dsui_1982 PF00009 Elongation factor Tu GTP binding domain Dsui_1983 PF01507 Phosphoadenosine phosphosulfate reductase family Dsui_1984 PF01507 Phosphoadenosine phosphosulfate reductase family Dsui_1987 PF01925 Sulfite exporter TauE/SafE Dsui_1988 PF03466 LysR substrate binding domain Dsui_1988 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family Dsui_1989 PF01250 Ribosomal protein S6 Dsui_1991 PF01084 Ribosomal protein S18 Dsui_1992 PF01281 Ribosomal protein L9, N-terminal domain Dsui_1992 PF03948 Ribosomal protein L9, C-terminal domain Dsui_1993 PF03796 DnaB-like helicase C terminal domain Dsui_1993 PF00772 DnaB-like helicase N terminal domain Dsui_1996 PF02562 PhoH-like protein Dsui_1996 PF13638 PIN domain Dsui_1997 PF00578 AhpC/TSA family Dsui_1998 PF01177 Asp/Glu/Hydantoin racemase Dsui_1999 PF01042 Endoribonuclease L-PSP Dsui_2002 PF03350 Uncharacterized protein family, UPF0114 Dsui_2003 PF13193 AMP-binding enzyme C-terminal domain Dsui_2003 PF00501 AMP-binding enzyme Dsui_2003 PF16177 Acetyl-coenzyme A synthetase N-terminus Dsui_2004 PF00478 IMP dehydrogenase / GMP reductase domain Dsui_2004 PF00571 CBS domain Dsui_2005 PF14579 Helix-hairpin-helix motif Dsui_2005 PF11490 DNA polymerase III polC-type N-terminus II Dsui_2005 PF02811 PHP domain Dsui_2005 PF07733 Bacterial DNA polymerase III alpha NTPase domain Dsui_2005 PF17657 Bacterial DNA polymerase III alpha subunit finger domain Dsui_2005 PF00929 Exonuclease Dsui_2005 PF14480 DNA polymerase III polC-type N-terminus I Dsui_2006 PF00474 Sodium:solute symporter family Dsui_2010 PF00565 Staphylococcal nuclease homologue Dsui_2013 PF01695 IstB-like ATP binding protein Dsui_2014 PF00665 Integrase core domain Dsui_2017 PF00625 Guanylate kinase Dsui_2018 PF09299 Mu transposase, C-terminal Dsui_2018 PF00665 Integrase core domain Dsui_2023 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family Dsui_2023 PF03466 LysR substrate binding domain Dsui_2024 PF07859 alpha/beta hydrolase fold Dsui_2025 PF13533 Biotin-lipoyl like Dsui_2026 PF00873 AcrB/AcrD/AcrF family Dsui_2027 PF02321 Outer membrane efflux protein Dsui_2028 PF01541 GIY-YIG catalytic domain Dsui_2030 PF01063 Amino-transferase class IV Dsui_2032 PF00563 EAL domain Dsui_2032 PF03707 Bacterial signalling protein N terminal repeat Dsui_2032 PF00990 Diguanylate cyclase, GGDEF domain Dsui_2033 PF03466 LysR substrate binding domain Dsui_2033 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family Dsui_2034 PF06445 GyrI-like small molecule binding domain Dsui_2035 PF03466 LysR substrate binding domain Dsui_2035 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family Dsui_2039 PF01053 Cys/Met metabolism PLP-dependent enzyme Dsui_2040 PF13380 CoA binding domain Dsui_2041 PF00378 Enoyl-CoA hydratase/isomerase Dsui_2042 PF01053 Cys/Met metabolism PLP-dependent enzyme Dsui_2043 PF00291 Pyridoxal-phosphate dependent enzyme Dsui_2044 PF00581 Rhodanese-like domain Dsui_2046 PF00563 EAL domain Dsui_2046 PF03707 Bacterial signalling protein N terminal repeat Dsui_2046 PF00990 Diguanylate cyclase, GGDEF domain Dsui_2049 PF06472 ABC transporter transmembrane region 2 Dsui_2049 PF00005 ABC transporter Dsui_2053 PF01844 HNH endonuclease Dsui_2055 PF03551 Transcriptional regulator PadR-like family Dsui_2055 PF13847 Methyltransferase domain Dsui_2057 PF00005 ABC transporter Dsui_2058 PF00005 ABC transporter Dsui_2058 PF12399 Branched-chain amino acid ATP-binding cassette transporter Dsui_2059 PF11862 Domain of unknown function (DUF3382) Dsui_2059 PF02653 Branched-chain amino acid transport system / permease component Dsui_2060 PF02653 Branched-chain amino acid transport system / permease component Dsui_2061 PF13458 Periplasmic binding protein Dsui_2062 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase Dsui_2062 PF01346 Domain amino terminal to FKBP-type peptidyl-prolyl isomerase Dsui_2063 PF00472 RF-1 domain Dsui_2064 PF03180 NLPA lipoprotein Dsui_2065 PF03079 ARD/ARD' family Dsui_2066 PF03180 NLPA lipoprotein Dsui_2067 PF00528 Binding-protein-dependent transport system inner membrane component Dsui_2068 PF09383 NIL domain Dsui_2068 PF00005 ABC transporter Dsui_2069 PF00501 AMP-binding enzyme Dsui_2069 PF13193 AMP-binding enzyme C-terminal domain Dsui_2070 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family Dsui_2070 PF03466 LysR substrate binding domain Dsui_2071 PF02525 Flavodoxin-like fold Dsui_2072 PF02678 Pirin Dsui_2072 PF05726 Pirin C-terminal cupin domain Dsui_2075 PF00817 impB/mucB/samB family Dsui_2075 PF11799 impB/mucB/samB family C-terminal domain Dsui_2076 PF13442 Cytochrome C oxidase, cbb3-type, subunit III Dsui_2078 PF00034 Cytochrome c Dsui_2079 PF00512 His Kinase A (phospho-acceptor) domain Dsui_2079 PF00989 PAS fold Dsui_2079 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase Dsui_2080 PF00196 Bacterial regulatory proteins, luxR family Dsui_2080 PF00072 Response regulator receiver domain Dsui_2081 PF00392 Bacterial regulatory proteins, gntR family Dsui_2081 PF00155 Aminotransferase class I and II Dsui_2082 PF02627 Carboxymuconolactone decarboxylase family Dsui_2086 PF13442 Cytochrome C oxidase, cbb3-type, subunit III Dsui_2086 PF00034 Cytochrome c Dsui_2087 PF00034 Cytochrome c Dsui_2088 PF13442 Cytochrome C oxidase, cbb3-type, subunit III Dsui_2090 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family Dsui_2090 PF03466 LysR substrate binding domain Dsui_2096 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain Dsui_2096 PF08447 PAS fold Dsui_2096 PF13426 PAS domain Dsui_2097 PF00149 Calcineurin-like phosphoesterase Dsui_2099 PF04542 Sigma-70 region 2 Dsui_2099 PF08281 Sigma-70, region 4 Dsui_2104 PF01695 IstB-like ATP binding protein Dsui_2105 PF00665 Integrase core domain Dsui_2111 PF00266 Aminotransferase class-V Dsui_2113 PF00132 Bacterial transferase hexapeptide (six repeats) Dsui_2115 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family Dsui_2115 PF03466 LysR substrate binding domain Dsui_2116 PF00465 Iron-containing alcohol dehydrogenase Dsui_2117 PF01144 Coenzyme A transferase Dsui_2119 PF02630 SCO1/SenC Dsui_2121 PF00005 ABC transporter Dsui_2122 PF09084 NMT1/THI5 like Dsui_2123 PF00990 Diguanylate cyclase, GGDEF domain Dsui_2123 PF10442 FIST C domain Dsui_2123 PF08495 FIST N domain Dsui_2123 PF00563 EAL domain Dsui_2124 PF00672 HAMP domain Dsui_2124 PF17200 Single Cache domain 2 Dsui_2124 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain Dsui_2125 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase Dsui_2125 PF00512 His Kinase A (phospho-acceptor) domain Dsui_2125 PF08448 PAS fold Dsui_2125 PF00072 Response regulator receiver domain Dsui_2125 PF13426 PAS domain Dsui_2126 PF05222 Alanine dehydrogenase/PNT, N-terminal domain Dsui_2126 PF01262 Alanine dehydrogenase/PNT, C-terminal domain Dsui_2127 PF00175 Oxidoreductase NAD-binding domain Dsui_2127 PF00970 Oxidoreductase FAD-binding domain Dsui_2129 PF00216 Bacterial DNA-binding protein Dsui_2130 PF00593 TonB dependent receptor Dsui_2130 PF07715 TonB-dependent Receptor Plug Domain Dsui_2134 PF00696 Amino acid kinase family Dsui_2134 PF01842 ACT domain Dsui_2134 PF13840 ACT domain Dsui_2137 PF01242 6-pyruvoyl tetrahydropterin synthase Dsui_2138 PF02230 Phospholipase/Carboxylesterase Dsui_2145 PF01027 Inhibitor of apoptosis-promoting Bax1 Dsui_2146 PF00216 Bacterial DNA-binding protein Dsui_2147 PF04381 Putative exonuclease, RdgC Dsui_2148 PF00563 EAL domain Dsui_2148 PF03707 Bacterial signalling protein N terminal repeat Dsui_2148 PF00990 Diguanylate cyclase, GGDEF domain Dsui_2149 PF13307 Helicase C-terminal domain Dsui_2149 PF04851 Type III restriction enzyme, res subunit Dsui_2151 PF03205 Molybdopterin guanine dinucleotide synthesis protein B Dsui_2152 PF03454 MoeA C-terminal region (domain IV) Dsui_2152 PF03453 MoeA N-terminal region (domain I and II) Dsui_2152 PF00994 Probable molybdopterin binding domain Dsui_2153 PF02597 ThiS family Dsui_2154 PF02391 MoaE protein Dsui_2156 PF17200 Single Cache domain 2 Dsui_2156 PF00672 HAMP domain Dsui_2156 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain Dsui_2157 PF07730 Histidine kinase Dsui_2157 PF17200 Single Cache domain 2 Dsui_2158 PF00072 Response regulator receiver domain Dsui_2158 PF00196 Bacterial regulatory proteins, luxR family Dsui_2159 PF17200 Single Cache domain 2 Dsui_2159 PF00672 HAMP domain Dsui_2159 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain Dsui_2160 PF03707 Bacterial signalling protein N terminal repeat Dsui_2160 PF00990 Diguanylate cyclase, GGDEF domain Dsui_2160 PF00563 EAL domain Dsui_2161 PF10431 C-terminal, D2-small domain, of ClpB protein Dsui_2161 PF02861 Clp amino terminal domain, pathogenicity island component Dsui_2161 PF07724 AAA domain (Cdc48 subfamily) Dsui_2161 PF17871 AAA lid domain Dsui_2161 PF00004 ATPase family associated with various cellular activities (AAA) Dsui_2163 PF03692 Putative zinc- or iron-chelating domain Dsui_2164 PF00512 His Kinase A (phospho-acceptor) domain Dsui_2164 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) Dsui_2164 PF00072 Response regulator receiver domain Dsui_2164 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase Dsui_2164 PF01627 Hpt domain Dsui_2164 PF00672 HAMP domain Dsui_2167 PF00593 TonB dependent receptor Dsui_2167 PF07715 TonB-dependent Receptor Plug Domain Dsui_2168 PF00756 Putative esterase Dsui_2170 PF03929 PepSY-associated TM region Dsui_2172 PF01047 MarR family Dsui_2173 PF02566 OsmC-like protein Dsui_2175 PF06415 BPG-independent PGAM N-terminus (iPGM_N) Dsui_2175 PF01676 Metalloenzyme superfamily Dsui_2179 PF01613 Flavin reductase like domain Dsui_2185 PF03352 Methyladenine glycosylase Dsui_2187 PF00501 AMP-binding enzyme Dsui_2187 PF13193 AMP-binding enzyme C-terminal domain Dsui_2189 PF13607 Succinyl-CoA ligase like flavodoxin domain Dsui_2189 PF13380 CoA binding domain Dsui_2189 PF00583 Acetyltransferase (GNAT) family Dsui_2191 PF01593 Flavin containing amine oxidoreductase Dsui_2195 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase Dsui_2195 PF05697 Bacterial trigger factor protein (TF) Dsui_2195 PF05698 Bacterial trigger factor protein (TF) C-terminus Dsui_2196 PF00574 Clp protease Dsui_2197 PF07724 AAA domain (Cdc48 subfamily) Dsui_2197 PF10431 C-terminal, D2-small domain, of ClpB protein Dsui_2197 PF06689 ClpX C4-type zinc finger Dsui_2198 PF02190 ATP-dependent protease La (LON) substrate-binding domain Dsui_2198 PF00004 ATPase family associated with various cellular activities (AAA) Dsui_2198 PF05362 Lon protease (S16) C-terminal proteolytic domain Dsui_2199 PF00216 Bacterial DNA-binding protein Dsui_2202 PF05698 Bacterial trigger factor protein (TF) C-terminus Dsui_2205 PF00330 Aconitase family (aconitate hydratase) Dsui_2205 PF06434 Aconitate hydratase 2 N-terminus Dsui_2205 PF11791 Aconitate B N-terminal domain Dsui_2209 PF00056 lactate/malate dehydrogenase, NAD binding domain Dsui_2209 PF02866 lactate/malate dehydrogenase, alpha/beta C-terminal domain Dsui_2210 PF07702 UTRA domain Dsui_2210 PF00392 Bacterial regulatory proteins, gntR family Dsui_2211 PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit Dsui_2213 PF00890 FAD binding domain Dsui_2213 PF02910 Fumarate reductase flavoprotein C-term Dsui_2214 PF13085 2Fe-2S iron-sulfur cluster binding domain Dsui_2215 PF03937 Flavinator of succinate dehydrogenase Dsui_2216 PF00285 Citrate synthase, C-terminal domain Dsui_2217 PF00676 Dehydrogenase E1 component Dsui_2217 PF02779 Transketolase, pyrimidine binding domain Dsui_2217 PF16078 2-oxoglutarate dehydrogenase N-terminus Dsui_2217 PF16870 2-oxoglutarate dehydrogenase C-terminal Dsui_2218 PF02817 e3 binding domain Dsui_2218 PF00364 Biotin-requiring enzyme Dsui_2218 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) Dsui_2219 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain Dsui_2219 PF07992 Pyridine nucleotide-disulphide oxidoreductase Dsui_2221 PF03969 AFG1-like ATPase Dsui_2223 PF05362 Lon protease (S16) C-terminal proteolytic domain Dsui_2223 PF13654 AAA domain Dsui_2224 PF04304 Protein of unknown function (DUF454) Dsui_2227 PF01058 NADH ubiquinone oxidoreductase, 20 Kd subunit Dsui_2228 PF08240 Alcohol dehydrogenase GroES-like domain Dsui_2228 PF00107 Zinc-binding dehydrogenase Dsui_2229 PF03466 LysR substrate binding domain Dsui_2229 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family Dsui_2230 PF03601 Conserved hypothetical protein 698 Dsui_2233 PF00141 Peroxidase Dsui_2236 PF12911 N-terminal TM domain of oligopeptide transport permease C Dsui_2236 PF00528 Binding-protein-dependent transport system inner membrane component Dsui_2237 PF00528 Binding-protein-dependent transport system inner membrane component Dsui_2238 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle Dsui_2239 PF05958 tRNA (Uracil-5-)-methyltransferase Dsui_2240 PF00072 Response regulator receiver domain Dsui_2240 PF01627 Hpt domain Dsui_2240 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase Dsui_2240 PF00672 HAMP domain Dsui_2240 PF00512 His Kinase A (phospho-acceptor) domain Dsui_2240 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) Dsui_2241 PF01053 Cys/Met metabolism PLP-dependent enzyme Dsui_2244 PF01624 MutS domain I Dsui_2244 PF05188 MutS domain II Dsui_2244 PF05192 MutS domain III Dsui_2244 PF05190 MutS family domain IV Dsui_2244 PF00488 MutS domain V Dsui_2245 PF09086 Domain of unknown function (DUF1924) Dsui_2248 PF00486 Transcriptional regulatory protein, C terminal Dsui_2248 PF00072 Response regulator receiver domain Dsui_2249 PF08521 Two-component sensor kinase N-terminal Dsui_2249 PF00512 His Kinase A (phospho-acceptor) domain Dsui_2249 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase Dsui_2250 PF01966 HD domain Dsui_2251 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase Dsui_2251 PF01627 Hpt domain Dsui_2251 PF00512 His Kinase A (phospho-acceptor) domain Dsui_2251 PF00072 Response regulator receiver domain Dsui_2252 PF00392 Bacterial regulatory proteins, gntR family Dsui_2252 PF00155 Aminotransferase class I and II Dsui_2253 PF03594 Benzoate membrane transport protein Dsui_2254 PF00464 Serine hydroxymethyltransferase Dsui_2256 PF00175 Oxidoreductase NAD-binding domain Dsui_2256 PF00970 Oxidoreductase FAD-binding domain Dsui_2257 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family Dsui_2257 PF03466 LysR substrate binding domain Dsui_2260 PF00155 Aminotransferase class I and II Dsui_2260 PF00392 Bacterial regulatory proteins, gntR family Dsui_2265 PF02811 PHP domain Dsui_2265 PF14579 Helix-hairpin-helix motif Dsui_2265 PF17657 Bacterial DNA polymerase III alpha subunit finger domain Dsui_2265 PF07733 Bacterial DNA polymerase III alpha NTPase domain Dsui_2269 PF01726 LexA DNA binding domain Dsui_2269 PF00717 Peptidase S24-like Dsui_2275 PF13443 Cro/C1-type HTH DNA-binding domain Dsui_2277 PF04717 Type VI secretion system, phage-baseplate injector Dsui_2277 PF16671 Actin cross-linking domain Dsui_2287 PF17432 Domain of unknown function (DUF3458_C) ARM repeats Dsui_2287 PF01433 Peptidase family M1 domain Dsui_2287 PF11940 Domain of unknown function (DUF3458) Ig-like fold Dsui_2289 PF02470 MlaD protein Dsui_2290 PF04403 Paraquat-inducible protein A Dsui_2293 PF00561 alpha/beta hydrolase fold Dsui_2293 PF07167 Poly-beta-hydroxybutyrate polymerase (PhaC) N-terminus Dsui_2296 PF03975 CheD chemotactic sensory transduction Dsui_2297 PF00501 AMP-binding enzyme Dsui_2297 PF13193 AMP-binding enzyme C-terminal domain Dsui_2301 PF12792 CSS motif domain associated with EAL Dsui_2301 PF00563 EAL domain Dsui_2302 PF02771 Acyl-CoA dehydrogenase, N-terminal domain Dsui_2302 PF12806 Acetyl-CoA dehydrogenase C-terminal like Dsui_2302 PF00441 Acyl-CoA dehydrogenase, C-terminal domain Dsui_2302 PF02770 Acyl-CoA dehydrogenase, middle domain Dsui_2304 PF00766 Electron transfer flavoprotein FAD-binding domain Dsui_2304 PF01012 Electron transfer flavoprotein domain Dsui_2305 PF01012 Electron transfer flavoprotein domain Dsui_2306 PF00440 Bacterial regulatory proteins, tetR family Dsui_2306 PF08359 YsiA-like protein, C-terminal region Dsui_2307 PF00005 ABC transporter Dsui_2308 PF13472 GDSL-like Lipase/Acylhydrolase family Dsui_2309 PF02769 AIR synthase related protein, C-terminal domain Dsui_2309 PF00586 AIR synthase related protein, N-terminal domain Dsui_2310 PF00581 Rhodanese-like domain Dsui_2311 PF00857 Isochorismatase family Dsui_2313 PF06418 CTP synthase N-terminus Dsui_2313 PF00117 Glutamine amidotransferase class-I Dsui_2314 PF00793 DAHP synthetase I family Dsui_2317 PF00113 Enolase, C-terminal TIM barrel domain Dsui_2317 PF03952 Enolase, N-terminal domain Dsui_2318 PF04977 Septum formation initiator Dsui_2322 PF03883 Peroxide stress protein YaaA Dsui_2329 PF01266 FAD dependent oxidoreductase Dsui_2330 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain Dsui_2330 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain Dsui_2332 PF00860 Permease family Dsui_2334 PF01207 Dihydrouridine synthase (Dus) Dsui_2339 PF08668 HDOD domain Dsui_2339 PF00563 EAL domain Dsui_2341 PF00005 ABC transporter Dsui_2347 PF00694 Aconitase C-terminal domain Dsui_2347 PF00330 Aconitase family (aconitate hydratase) Dsui_2349 PF00753 Metallo-beta-lactamase superfamily Dsui_2349 PF07521 Zn-dependent metallo-hydrolase RNA specificity domain Dsui_2349 PF10996 Beta-Casp domain Dsui_2350 PF13411 MerR HTH family regulatory protein Dsui_2353 PF03466 LysR substrate binding domain Dsui_2353 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family Dsui_2354 PF02900 Catalytic LigB subunit of aromatic ring-opening dioxygenase Dsui_2355 PF01292 Prokaryotic cytochrome b561 Dsui_2357 PF04264 YceI-like domain Dsui_2358 PF00512 His Kinase A (phospho-acceptor) domain Dsui_2358 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase Dsui_2360 PF00158 Sigma-54 interaction domain Dsui_2360 PF00072 Response regulator receiver domain Dsui_2364 PF13407 Periplasmic binding protein domain Dsui_2365 PF00990 Diguanylate cyclase, GGDEF domain Dsui_2365 PF00563 EAL domain Dsui_2365 PF03707 Bacterial signalling protein N terminal repeat Dsui_2366 PF00459 Inositol monophosphatase family Dsui_2367 PF00588 SpoU rRNA Methylase family Dsui_2368 PF00132 Bacterial transferase hexapeptide (six repeats) Dsui_2369 PF02082 Transcriptional regulator Dsui_2370 PF00266 Aminotransferase class-V Dsui_2371 PF00266 Aminotransferase class-V Dsui_2372 PF01592 NifU-like N terminal domain Dsui_2373 PF01521 Iron-sulphur cluster biosynthesis Dsui_2374 PF07743 HSCB C-terminal oligomerisation domain Dsui_2375 PF00012 Hsp70 protein Dsui_2376 PF00111 2Fe-2S iron-sulfur cluster binding domain Dsui_2377 PF04384 Iron-sulphur cluster assembly Dsui_2380 PF00132 Bacterial transferase hexapeptide (six repeats) Dsui_2381 PF00793 DAHP synthetase I family Dsui_2382 PF00512 His Kinase A (phospho-acceptor) domain Dsui_2382 PF01627 Hpt domain Dsui_2382 PF00672 HAMP domain Dsui_2382 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase Dsui_2382 PF00072 Response regulator receiver domain Dsui_2382 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) Dsui_2385 PF00270 DEAD/DEAH box helicase Dsui_2385 PF00271 Helicase conserved C-terminal domain Dsui_2385 PF03461 TRCF domain Dsui_2385 PF17757 UvrB interaction domain Dsui_2385 PF02559 CarD-like/TRCF domain Dsui_2388 PF01875 Memo-like protein Dsui_2390 PF01128 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase Dsui_2391 PF02542 YgbB family Dsui_2393 PF01966 HD domain Dsui_2393 PF11871 Domain of unknown function (DUF3391) Dsui_2394 PF03707 Bacterial signalling protein N terminal repeat Dsui_2394 PF00563 EAL domain Dsui_2394 PF00990 Diguanylate cyclase, GGDEF domain Dsui_2399 PF01569 PAP2 superfamily Dsui_2400 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase Dsui_2400 PF00512 His Kinase A (phospho-acceptor) domain Dsui_2400 PF00672 HAMP domain Dsui_2401 PF00486 Transcriptional regulatory protein, C terminal Dsui_2401 PF00072 Response regulator receiver domain Dsui_2403 PF00814 Glycoprotease family Dsui_2404 PF00583 Acetyltransferase (GNAT) family Dsui_2405 PF03167 Uracil DNA glycosylase superfamily Dsui_2406 PF04011 LemA family Dsui_2407 PF04536 TPM domain Dsui_2409 PF07690 Major Facilitator Superfamily Dsui_2410 PF03466 LysR substrate binding domain Dsui_2410 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family Dsui_2411 PF00842 Alanine racemase, C-terminal domain Dsui_2411 PF01168 Alanine racemase, N-terminal domain Dsui_2412 PF00563 EAL domain Dsui_2412 PF08447 PAS fold Dsui_2412 PF00990 Diguanylate cyclase, GGDEF domain Dsui_2412 PF08448 PAS fold Dsui_2413 PF18073 Rubredoxin metal binding domain Dsui_2416 PF13676 TIR domain Dsui_2418 PF16658 Class II release factor RF3, C-terminal domain Dsui_2418 PF00009 Elongation factor Tu GTP binding domain Dsui_2418 PF03144 Elongation factor Tu domain 2 Dsui_2419 PF03707 Bacterial signalling protein N terminal repeat Dsui_2419 PF00990 Diguanylate cyclase, GGDEF domain Dsui_2419 PF00563 EAL domain Dsui_2420 PF04055 Radical SAM superfamily Dsui_2420 PF11842 Domain of unknown function (DUF3362) Dsui_2420 PF08497 Radical SAM N-terminal Dsui_2421 PF00990 Diguanylate cyclase, GGDEF domain Dsui_2421 PF10442 FIST C domain Dsui_2421 PF00563 EAL domain Dsui_2421 PF08495 FIST N domain Dsui_2425 PF00563 EAL domain Dsui_2425 PF00990 Diguanylate cyclase, GGDEF domain Dsui_2425 PF03707 Bacterial signalling protein N terminal repeat Dsui_2427 PF06463 Molybdenum Cofactor Synthesis C Dsui_2427 PF04055 Radical SAM superfamily Dsui_2433 PF00155 Aminotransferase class I and II Dsui_2434 PF02151 UvrB/uvrC motif Dsui_2434 PF00271 Helicase conserved C-terminal domain Dsui_2434 PF12344 Ultra-violet resistance protein B Dsui_2434 PF17757 UvrB interaction domain Dsui_2434 PF04851 Type III restriction enzyme, res subunit Dsui_2435 PF01451 Low molecular weight phosphotyrosine protein phosphatase Dsui_2436 PF10150 Ribonuclease E/G family Dsui_2436 PF00575 S1 RNA binding domain Dsui_2436 PF12111 Polyribonucleotide phosphorylase C terminal Dsui_2437 PF01479 S4 domain Dsui_2437 PF00849 RNA pseudouridylate synthase Dsui_2440 PF01343 Peptidase family S49 Dsui_2440 PF06965 Na+/H+ antiporter 1 Dsui_2441 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases Dsui_2442 PF02545 Maf-like protein Dsui_2443 PF02620 Large ribosomal RNA subunit accumulation protein YceD Dsui_2444 PF01783 Ribosomal L32p protein family Dsui_2445 PF02504 Fatty acid synthesis protein Dsui_2446 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III Dsui_2446 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal Dsui_2447 PF00698 Acyl transferase domain Dsui_2449 PF00550 Phosphopantetheine attachment site Dsui_2450 PF00109 Beta-ketoacyl synthase, N-terminal domain Dsui_2450 PF02801 Beta-ketoacyl synthase, C-terminal domain Dsui_2452 PF00890 FAD binding domain Dsui_2452 PF02910 Fumarate reductase flavoprotein C-term Dsui_2453 PF08281 Sigma-70, region 4 Dsui_2453 PF04542 Sigma-70 region 2 Dsui_2455 PF13180 PDZ domain Dsui_2457 PF00679 Elongation factor G C-terminus Dsui_2457 PF00009 Elongation factor Tu GTP binding domain Dsui_2457 PF03144 Elongation factor Tu domain 2 Dsui_2457 PF06421 GTP-binding protein LepA C-terminus Dsui_2458 PF10502 Signal peptidase, peptidase S26 Dsui_2460 PF14622 Ribonuclease-III-like Dsui_2460 PF00035 Double-stranded RNA binding motif Dsui_2461 PF01926 50S ribosome-binding GTPase Dsui_2461 PF07650 KH domain Dsui_2462 PF02565 Recombination protein O C terminal Dsui_2462 PF11967 Recombination protein O N terminal Dsui_2463 PF03740 Pyridoxal phosphate biosynthesis protein PdxJ Dsui_2464 PF01648 4'-phosphopantetheinyl transferase superfamily Dsui_2465 PF00933 Glycosyl hydrolase family 3 N terminal domain Dsui_2466 PF14743 DNA ligase OB-like domain Dsui_2466 PF01068 ATP dependent DNA ligase domain Dsui_2467 PF01132 Elongation factor P (EF-P) OB domain Dsui_2467 PF09285 Elongation factor P, C-terminal Dsui_2467 PF08207 Elongation factor P (EF-P) KOW-like domain Dsui_2470 PF01541 GIY-YIG catalytic domain Dsui_2470 PF02151 UvrB/uvrC motif Dsui_2470 PF08459 UvrC Helix-hairpin-helix N-terminal Dsui_2471 PF01066 CDP-alcohol phosphatidyltransferase Dsui_2481 PF00929 Exonuclease Dsui_2482 PF00075 RNase H Dsui_2483 PF01209 ubiE/COQ5 methyltransferase family Dsui_2484 PF16123 Hydroxyacylglutathione hydrolase C-terminus Dsui_2484 PF00753 Metallo-beta-lactamase superfamily Dsui_2485 PF00072 Response regulator receiver domain Dsui_2486 PF01590 GAF domain Dsui_2486 PF00563 EAL domain Dsui_2486 PF00360 Phytochrome region Dsui_2486 PF00990 Diguanylate cyclase, GGDEF domain Dsui_2487 PF02646 RmuC family Dsui_2490 PF03793 PASTA domain Dsui_2490 PF00069 Protein kinase domain Dsui_2492 PF02796 Helix-turn-helix domain of resolvase Dsui_2492 PF00239 Resolvase, N terminal domain Dsui_2493 PF00376 MerR family regulatory protein Dsui_2493 PF09278 MerR, DNA binding Dsui_2494 PF02411 MerT mercuric transport protein Dsui_2495 PF00403 Heavy-metal-associated domain Dsui_2497 PF00403 Heavy-metal-associated domain Dsui_2497 PF07992 Pyridine nucleotide-disulphide oxidoreductase Dsui_2497 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain Dsui_2498 PF13411 MerR HTH family regulatory protein Dsui_2499 PF05052 MerE protein Dsui_2500 PF02796 Helix-turn-helix domain of resolvase Dsui_2500 PF00239 Resolvase, N terminal domain Dsui_2506 PF00665 Integrase core domain Dsui_2506 PF13936 Helix-turn-helix domain Dsui_2508 PF13247 4Fe-4S dicluster domain Dsui_2509 PF03916 Polysulphide reductase, NrfD Dsui_2510 PF00384 Molybdopterin oxidoreductase Dsui_2510 PF04879 Molybdopterin oxidoreductase Fe4S4 domain Dsui_2510 PF01568 Molydopterin dinucleotide binding domain Dsui_2511 PF00196 Bacterial regulatory proteins, luxR family Dsui_2511 PF00072 Response regulator receiver domain Dsui_2512 PF00989 PAS fold Dsui_2512 PF00512 His Kinase A (phospho-acceptor) domain Dsui_2512 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase Dsui_2519 PF08447 PAS fold Dsui_2519 PF13426 PAS domain Dsui_2519 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain Dsui_2520 PF06429 Flagellar basal body rod FlgEFG protein C-terminal Dsui_2520 PF00460 Flagella basal body rod protein Dsui_2521 PF00291 Pyridoxal-phosphate dependent enzyme Dsui_2526 PF02796 Helix-turn-helix domain of resolvase Dsui_2526 PF00239 Resolvase, N terminal domain Dsui_2528 PF00069 Protein kinase domain Dsui_2528 PF03793 PASTA domain Dsui_2529 PF13525 Outer membrane lipoprotein Dsui_2530 PF00849 RNA pseudouridylate synthase Dsui_2532 PF03480 Bacterial extracellular solute-binding protein, family 7 Dsui_2533 PF04290 Tripartite ATP-independent periplasmic transporters, DctQ component Dsui_2534 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component Dsui_2537 PF07167 Poly-beta-hydroxybutyrate polymerase (PhaC) N-terminus Dsui_2538 PF00106 short chain dehydrogenase Dsui_2539 PF07879 PHB/PHA accumulation regulator DNA-binding domain Dsui_2539 PF05233 PHB accumulation regulatory domain Dsui_2540 PF04055 Radical SAM superfamily Dsui_2540 PF18693 TRAM domain Dsui_2540 PF00919 Uncharacterized protein family UPF0004 Dsui_2541 PF01734 Patatin-like phospholipase Dsui_2542 PF02913 FAD linked oxidases, C-terminal domain Dsui_2542 PF01565 FAD binding domain Dsui_2544 PF01430 Hsp33 protein Dsui_2545 PF03960 ArsC family Dsui_2546 PF17674 HHH domain Dsui_2546 PF00575 S1 RNA binding domain Dsui_2546 PF09371 Tex-like protein N-terminal domain Dsui_2546 PF16921 Tex protein YqgF-like domain Dsui_2547 PF03707 Bacterial signalling protein N terminal repeat Dsui_2547 PF00990 Diguanylate cyclase, GGDEF domain Dsui_2547 PF00563 EAL domain Dsui_2547 PF13188 PAS domain Dsui_2548 PF02623 FliW protein Dsui_2557 PF00665 Integrase core domain Dsui_2558 PF01695 IstB-like ATP binding protein Dsui_2579 PF00437 Type II/IV secretion system protein Dsui_2591 PF00437 Type II/IV secretion system protein Dsui_2594 PF00437 Type II/IV secretion system protein Dsui_2597 PF00589 Phage integrase family Dsui_2597 PF02899 Phage integrase, N-terminal SAM-like domain Dsui_2605 PF03707 Bacterial signalling protein N terminal repeat Dsui_2605 PF13188 PAS domain Dsui_2605 PF00990 Diguanylate cyclase, GGDEF domain Dsui_2605 PF00563 EAL domain Dsui_2606 PF01464 Transglycosylase SLT domain Dsui_2608 PF01131 DNA topoisomerase Dsui_2608 PF01751 Toprim domain Dsui_2617 PF04381 Putative exonuclease, RdgC Dsui_2621 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain Dsui_2623 PF02899 Phage integrase, N-terminal SAM-like domain Dsui_2623 PF00589 Phage integrase family Dsui_2628 PF11525 Copper resistance protein K Dsui_2629 PF00072 Response regulator receiver domain Dsui_2630 PF00460 Flagella basal body rod protein Dsui_2635 PF00873 AcrB/AcrD/AcrF family Dsui_2636 PF13533 Biotin-lipoyl like Dsui_2641 PF07731 Multicopper oxidase Dsui_2641 PF07732 Multicopper oxidase Dsui_2644 PF00072 Response regulator receiver domain Dsui_2644 PF00486 Transcriptional regulatory protein, C terminal Dsui_2645 PF00512 His Kinase A (phospho-acceptor) domain Dsui_2645 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase Dsui_2645 PF00672 HAMP domain Dsui_2646 PF00004 ATPase family associated with various cellular activities (AAA) Dsui_2646 PF17862 AAA+ lid domain Dsui_2646 PF06480 FtsH Extracellular Dsui_2646 PF01434 Peptidase family M41 Dsui_2649 PF13700 Domain of unknown function (DUF4158) Dsui_2649 PF01526 Tn3 transposase DDE domain Dsui_2650 PF03480 Bacterial extracellular solute-binding protein, family 7 Dsui_2652 PF01026 TatD related DNase Dsui_2654 PF09115 DNA polymerase III, delta subunit, C terminal Dsui_2655 PF02223 Thymidylate kinase Dsui_2656 PF02618 YceG-like family Dsui_2657 PF01571 Aminomethyltransferase folate-binding domain Dsui_2659 PF00313 'Cold-shock' DNA-binding domain Dsui_2661 PF14437 MafB19-like deaminase Dsui_2665 PF05368 NmrA-like family Dsui_2666 PF01638 HxlR-like helix-turn-helix Dsui_2670 PF00117 Glutamine amidotransferase class-I Dsui_2670 PF00958 GMP synthase C terminal domain Dsui_2670 PF02540 NAD synthase Dsui_2671 PF00571 CBS domain Dsui_2671 PF00478 IMP dehydrogenase / GMP reductase domain Dsui_2673 PF03658 RnfH family Ubiquitin Dsui_2674 PF03364 Polyketide cyclase / dehydrase and lipid transport Dsui_2675 PF01668 SmpB protein Dsui_2676 PF03458 UPF0126 domain Dsui_2677 PF01326 Pyruvate phosphate dikinase, PEP/pyruvate binding domain Dsui_2677 PF02896 PEP-utilising enzyme, TIM barrel domain Dsui_2677 PF00391 PEP-utilising enzyme, mobile domain Dsui_2678 PF03618 Kinase/pyrophosphorylase Dsui_2679 PF08032 RNA 2'-O ribose methyltransferase substrate binding Dsui_2679 PF00588 SpoU rRNA Methylase family Dsui_2680 PF01351 Ribonuclease HII Dsui_2681 PF02684 Lipid-A-disaccharide synthetase Dsui_2682 PF13720 Udp N-acetylglucosamine O-acyltransferase; Domain 2 Dsui_2682 PF00132 Bacterial transferase hexapeptide (six repeats) Dsui_2683 PF07977 FabA-like domain Dsui_2684 PF04613 UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase, LpxD Dsui_2684 PF00132 Bacterial transferase hexapeptide (six repeats) Dsui_2686 PF07244 Surface antigen variable number repeat Dsui_2686 PF01103 Surface antigen Dsui_2687 PF17820 PDZ domain Dsui_2687 PF02163 Peptidase family M50 Dsui_2687 PF13180 PDZ domain Dsui_2688 PF08436 1-deoxy-D-xylulose 5-phosphate reductoisomerase C-terminal domain Dsui_2688 PF02670 1-deoxy-D-xylulose 5-phosphate reductoisomerase Dsui_2688 PF13288 DXP reductoisomerase C-terminal domain Dsui_2690 PF01255 Putative undecaprenyl diphosphate synthase Dsui_2691 PF01765 Ribosome recycling factor Dsui_2692 PF00696 Amino acid kinase family Dsui_2693 PF00889 Elongation factor TS Dsui_2694 PF00318 Ribosomal protein S2 Dsui_2695 PF00557 Metallopeptidase family M24 Dsui_2696 PF01966 HD domain Dsui_2696 PF08335 GlnD PII-uridylyltransferase Dsui_2696 PF01909 Nucleotidyltransferase domain Dsui_2697 PF01327 Polypeptide deformylase Dsui_2698 PF01048 Phosphorylase superfamily Dsui_2700 PF00483 Nucleotidyl transferase Dsui_2701 PF00533 BRCA1 C Terminus (BRCT) domain Dsui_2701 PF01653 NAD-dependent DNA ligase adenylation domain Dsui_2701 PF03120 NAD-dependent DNA ligase OB-fold domain Dsui_2701 PF03119 NAD-dependent DNA ligase C4 zinc finger domain Dsui_2701 PF12826 Helix-hairpin-helix motif Dsui_2703 PF06470 SMC proteins Flexible Hinge Domain Dsui_2703 PF02463 RecF/RecN/SMC N terminal domain Dsui_2704 PF02810 SEC-C motif Dsui_2704 PF03695 Uncharacterised protein family (UPF0149) Dsui_2705 PF00860 Permease family Dsui_2706 PF00156 Phosphoribosyl transferase domain Dsui_2708 PF00155 Aminotransferase class I and II Dsui_2709 PF00132 Bacterial transferase hexapeptide (six repeats) Dsui_2709 PF14805 Tetrahydrodipicolinate N-succinyltransferase N-terminal Dsui_2709 PF14602 Hexapeptide repeat of succinyl-transferase Dsui_2710 PF00437 Type II/IV secretion system protein Dsui_2711 PF01546 Peptidase family M20/M25/M40 Dsui_2711 PF07687 Peptidase dimerisation domain Dsui_2712 PF05175 Methyltransferase small domain Dsui_2713 PF01145 SPFH domain / Band 7 family Dsui_2713 PF12221 Bacterial membrane protein N terminal Dsui_2717 PF01258 Prokaryotic dksA/traR C4-type zinc finger Dsui_2718 PF01138 3' exoribonuclease family, domain 1 Dsui_2718 PF00013 KH domain Dsui_2718 PF03725 3' exoribonuclease family, domain 2 Dsui_2718 PF00575 S1 RNA binding domain Dsui_2718 PF03726 Polyribonucleotide nucleotidyltransferase, RNA binding domain Dsui_2719 PF00312 Ribosomal protein S15 Dsui_2720 PF09157 Pseudouridine synthase II TruB, C-terminal Dsui_2720 PF01509 TruB family pseudouridylate synthase (N terminal domain) Dsui_2720 PF16198 tRNA pseudouridylate synthase B C-terminal domain Dsui_2721 PF02033 Ribosome-binding factor A Dsui_2722 PF00009 Elongation factor Tu GTP binding domain Dsui_2722 PF11987 Translation-initiation factor 2 Dsui_2722 PF08364 Bacterial translation initiation factor IF-2 associated region Dsui_2722 PF04760 Translation initiation factor IF-2, N-terminal region Dsui_2723 PF08529 NusA N-terminal domain Dsui_2723 PF13184 NusA-like KH domain Dsui_2724 PF02576 RimP N-terminal domain Dsui_2724 PF17384 RimP C-terminal SH3 domain Dsui_2725 PF00849 RNA pseudouridylate synthase Dsui_2725 PF01479 S4 domain Dsui_2726 PF04079 Segregation and condensation complex subunit ScpB Dsui_2727 PF02616 Segregation and condensation protein ScpA Dsui_2728 PF00579 tRNA synthetases class I (W and Y) Dsui_2729 PF02163 Peptidase family M50 Dsui_2730 PF01300 Telomere recombination Dsui_2731 PF02811 PHP domain Dsui_2732 PF00561 alpha/beta hydrolase fold Dsui_2733 PF00210 Ferritin-like domain Dsui_2735 PF08669 Glycine cleavage T-protein C-terminal barrel domain Dsui_2735 PF01571 Aminomethyltransferase folate-binding domain Dsui_2736 PF01597 Glycine cleavage H-protein Dsui_2737 PF02347 Glycine cleavage system P-protein Dsui_2739 PF00364 Biotin-requiring enzyme Dsui_2739 PF02817 e3 binding domain Dsui_2739 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) Dsui_2742 PF00012 Hsp70 protein Dsui_2745 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain Dsui_2746 PF12848 ABC transporter Dsui_2746 PF00005 ABC transporter Dsui_2747 PF05675 Protein of unknown function (DUF817) Dsui_2752 PF00005 ABC transporter Dsui_2752 PF00664 ABC transporter transmembrane region Dsui_2754 PF12392 Collagenase Dsui_2754 PF01136 Peptidase family U32 Dsui_2757 PF17284 Spermidine synthase tetramerisation domain Dsui_2758 PF17785 PUA-like domain Dsui_2758 PF10672 S-adenosylmethionine-dependent methyltransferase Dsui_2759 PF00849 RNA pseudouridylate synthase Dsui_2759 PF01479 S4 domain Dsui_2760 PF01176 Translation initiation factor 1A / IF-1 Dsui_2763 PF01926 50S ribosome-binding GTPase Dsui_2765 PF02308 MgtC family Dsui_2766 PF01636 Phosphotransferase enzyme family Dsui_2770 PF00905 Penicillin binding protein transpeptidase domain Dsui_2770 PF00912 Transglycosylase Dsui_2771 PF07152 YaeQ protein Dsui_2775 PF04336 Acyl carrier protein phosphodiesterase Dsui_2777 PF07687 Peptidase dimerisation domain Dsui_2777 PF01546 Peptidase family M20/M25/M40 Dsui_2778 PF00132 Bacterial transferase hexapeptide (six repeats) Dsui_2779 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase Dsui_2779 PF00512 His Kinase A (phospho-acceptor) domain Dsui_2779 PF00672 HAMP domain Dsui_2780 PF00072 Response regulator receiver domain Dsui_2781 PF01627 Hpt domain Dsui_2781 PF00512 His Kinase A (phospho-acceptor) domain Dsui_2781 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) Dsui_2781 PF00672 HAMP domain Dsui_2781 PF00072 Response regulator receiver domain Dsui_2781 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase Dsui_2782 PF00072 Response regulator receiver domain Dsui_2783 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase Dsui_2783 PF00072 Response regulator receiver domain Dsui_2785 PF00521 DNA gyrase/topoisomerase IV, subunit A Dsui_2786 PF01751 Toprim domain Dsui_2786 PF00204 DNA gyrase B Dsui_2786 PF00986 DNA gyrase B subunit, carboxyl terminus Dsui_2786 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase Dsui_2787 PF00905 Penicillin binding protein transpeptidase domain Dsui_2787 PF00912 Transglycosylase Dsui_2789 PF00749 tRNA synthetases class I (E and Q), catalytic domain Dsui_2796 PF02146 Sir2 family Dsui_2797 PF01464 Transglycosylase SLT domain Dsui_2797 PF01476 LysM domain Dsui_2798 PF07690 Major Facilitator Superfamily Dsui_2799 PF00005 ABC transporter Dsui_2799 PF08352 Oligopeptide/dipeptide transporter, C-terminal region Dsui_2800 PF12911 N-terminal TM domain of oligopeptide transport permease C Dsui_2800 PF00528 Binding-protein-dependent transport system inner membrane component Dsui_2801 PF00528 Binding-protein-dependent transport system inner membrane component Dsui_2804 PF00563 EAL domain Dsui_2804 PF03707 Bacterial signalling protein N terminal repeat Dsui_2804 PF00990 Diguanylate cyclase, GGDEF domain Dsui_2805 PF00892 EamA-like transporter family Dsui_2806 PF00512 His Kinase A (phospho-acceptor) domain Dsui_2806 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase Dsui_2807 PF00378 Enoyl-CoA hydratase/isomerase Dsui_2808 PF00501 AMP-binding enzyme Dsui_2808 PF13193 AMP-binding enzyme C-terminal domain Dsui_2811 PF00005 ABC transporter Dsui_2812 PF02405 Permease MlaE Dsui_2813 PF02541 Ppx/GppA phosphatase family Dsui_2814 PF17941 Polyphosphate kinase C-terminal domain 1 Dsui_2814 PF02503 Polyphosphate kinase middle domain Dsui_2814 PF13090 Polyphosphate kinase C-terminal domain 2 Dsui_2814 PF13089 Polyphosphate kinase N-terminal domain Dsui_2815 PF03358 NADPH-dependent FMN reductase Dsui_2816 PF02824 TGS domain Dsui_2816 PF13291 ACT domain Dsui_2816 PF04607 Region found in RelA / SpoT proteins Dsui_2818 PF06167 Glucose-regulated metallo-peptidase M90 Dsui_2820 PF00561 alpha/beta hydrolase fold Dsui_2821 PF02254 TrkA-N domain Dsui_2821 PF07885 Ion channel Dsui_2823 PF03772 Competence protein Dsui_2823 PF00753 Metallo-beta-lactamase superfamily Dsui_2830 PF01555 DNA methylase Dsui_2833 PF01381 Helix-turn-helix Dsui_2845 PF01695 IstB-like ATP binding protein Dsui_2852 PF04829 Pre-toxin domain with VENN motif Dsui_2852 PF13018 Extended Signal Peptide of Type V secretion system Dsui_2852 PF13332 Hemagglutinin repeat Dsui_2852 PF05860 haemagglutination activity domain Dsui_2854 PF08479 POTRA domain, ShlB-type Dsui_2854 PF17287 POTRA domain Dsui_2854 PF03865 Haemolysin secretion/activation protein ShlB/FhaC/HecB Dsui_2856 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain Dsui_2856 PF00672 HAMP domain Dsui_2856 PF16591 Helical bimodular sensor domain Dsui_2857 PF00005 ABC transporter Dsui_2858 PF02687 FtsX-like permease family Dsui_2858 PF12704 MacB-like periplasmic core domain Dsui_2860 PF17768 RecJ OB domain Dsui_2860 PF02272 DHHA1 domain Dsui_2860 PF01368 DHH family Dsui_2861 PF00892 EamA-like transporter family Dsui_2863 PF00152 tRNA synthetases class II (D, K and N) Dsui_2863 PF01336 OB-fold nucleic acid binding domain Dsui_2864 PF01627 Hpt domain Dsui_2864 PF00072 Response regulator receiver domain Dsui_2864 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) Dsui_2864 PF00512 His Kinase A (phospho-acceptor) domain Dsui_2864 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase Dsui_2864 PF00672 HAMP domain Dsui_2866 PF07715 TonB-dependent Receptor Plug Domain Dsui_2866 PF00593 TonB dependent receptor Dsui_2868 PF01266 FAD dependent oxidoreductase Dsui_2868 PF05430 S-adenosyl-L-methionine-dependent methyltransferase Dsui_2869 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family Dsui_2869 PF03466 LysR substrate binding domain Dsui_2872 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase Dsui_2873 PF00578 AhpC/TSA family Dsui_2875 PF02321 Outer membrane efflux protein Dsui_2876 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion Dsui_2877 PF12704 MacB-like periplasmic core domain Dsui_2877 PF02687 FtsX-like permease family Dsui_2877 PF00005 ABC transporter Dsui_2878 PF02687 FtsX-like permease family Dsui_2878 PF00005 ABC transporter Dsui_2878 PF12704 MacB-like periplasmic core domain Dsui_2879 PF17200 Single Cache domain 2 Dsui_2879 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain Dsui_2879 PF00672 HAMP domain Dsui_2880 PF00202 Aminotransferase class-III Dsui_2881 PF00155 Aminotransferase class I and II Dsui_2882 PF12697 Alpha/beta hydrolase family Dsui_2883 PF08241 Methyltransferase domain Dsui_2885 PF00672 HAMP domain Dsui_2885 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase Dsui_2885 PF00512 His Kinase A (phospho-acceptor) domain Dsui_2885 PF01627 Hpt domain Dsui_2885 PF17149 Periplasmic sensor domain found in signal transduction proteins Dsui_2885 PF00072 Response regulator receiver domain Dsui_2886 PF04279 Intracellular septation protein A Dsui_2887 PF03795 YCII-related domain Dsui_2890 PF00563 EAL domain Dsui_2890 PF12792 CSS motif domain associated with EAL Dsui_2892 PF18076 Formylglycinamide ribonucleotide amidotransferase N-terminal Dsui_2892 PF18072 Formylglycinamide ribonucleotide amidotransferase linker domain Dsui_2892 PF02769 AIR synthase related protein, C-terminal domain Dsui_2893 PF05230 MASE2 domain Dsui_2893 PF00990 Diguanylate cyclase, GGDEF domain Dsui_2894 PF00563 EAL domain Dsui_2894 PF00990 Diguanylate cyclase, GGDEF domain Dsui_2894 PF08448 PAS fold Dsui_2896 PF00593 TonB dependent receptor Dsui_2896 PF07715 TonB-dependent Receptor Plug Domain Dsui_2897 PF00850 Histone deacetylase domain Dsui_2898 PF01256 Carbohydrate kinase Dsui_2898 PF03853 YjeF-related protein N-terminus Dsui_2900 PF01645 Conserved region in glutamate synthase Dsui_2901 PF01729 Quinolinate phosphoribosyl transferase, C-terminal domain Dsui_2901 PF02749 Quinolinate phosphoribosyl transferase, N-terminal domain Dsui_2903 PF05175 Methyltransferase small domain Dsui_2903 PF17827 PrmC N-terminal domain Dsui_2904 PF14821 Threonine synthase N terminus Dsui_2904 PF00291 Pyridoxal-phosphate dependent enzyme Dsui_2905 PF00700 Bacterial flagellin C-terminal helical region Dsui_2905 PF00669 Bacterial flagellin N-terminal helical region Dsui_2907 PF03447 Homoserine dehydrogenase, NAD binding domain Dsui_2907 PF00742 Homoserine dehydrogenase Dsui_2907 PF01842 ACT domain Dsui_2908 PF00155 Aminotransferase class I and II Dsui_2909 PF00155 Aminotransferase class I and II Dsui_2912 PF01522 Polysaccharide deacetylase Dsui_2913 PF00378 Enoyl-CoA hydratase/isomerase Dsui_2914 PF01292 Prokaryotic cytochrome b561 Dsui_2920 PF13193 AMP-binding enzyme C-terminal domain Dsui_2920 PF00501 AMP-binding enzyme Dsui_2921 PF00425 chorismate binding enzyme Dsui_2922 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain Dsui_2922 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain Dsui_2925 PF00501 AMP-binding enzyme Dsui_2925 PF13193 AMP-binding enzyme C-terminal domain Dsui_2925 PF16177 Acetyl-coenzyme A synthetase N-terminus Dsui_2926 PF00486 Transcriptional regulatory protein, C terminal Dsui_2926 PF00072 Response regulator receiver domain Dsui_2927 PF00877 NlpC/P60 family Dsui_2928 PF13416 Bacterial extracellular solute-binding protein Dsui_2933 PF00873 AcrB/AcrD/AcrF family Dsui_2935 PF01262 Alanine dehydrogenase/PNT, C-terminal domain Dsui_2935 PF05222 Alanine dehydrogenase/PNT, N-terminal domain Dsui_2936 PF12769 4TM region of pyridine nucleotide transhydrogenase, mitoch Dsui_2937 PF02233 NAD(P) transhydrogenase beta subunit Dsui_2942 PF00528 Binding-protein-dependent transport system inner membrane component Dsui_2943 PF08402 TOBE domain Dsui_2943 PF00005 ABC transporter Dsui_2944 PF00072 Response regulator receiver domain Dsui_2944 PF00990 Diguanylate cyclase, GGDEF domain Dsui_2946 PF00271 Helicase conserved C-terminal domain Dsui_2946 PF03880 DbpA RNA binding domain Dsui_2946 PF00270 DEAD/DEAH box helicase Dsui_2947 PF01863 Protein of unknown function DUF45 Dsui_2948 PF04542 Sigma-70 region 2 Dsui_2948 PF08281 Sigma-70, region 4 Dsui_2949 PF04773 FecR protein Dsui_2949 PF16220 Domain of unknown function (DUF4880) Dsui_2950 PF07715 TonB-dependent Receptor Plug Domain Dsui_2950 PF00593 TonB dependent receptor Dsui_2953 PF08448 PAS fold Dsui_2953 PF00990 Diguanylate cyclase, GGDEF domain Dsui_2955 PF01891 Cobalt uptake substrate-specific transmembrane region Dsui_2956 PF02553 Cobalt transport protein component CbiN Dsui_2958 PF00005 ABC transporter Dsui_2959 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases Dsui_2960 PF01903 CbiX Dsui_2961 PF02570 Precorrin-8X methylmutase Dsui_2962 PF01888 CbiD Dsui_2963 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases Dsui_2965 PF11760 Cobalamin synthesis G N-terminal Dsui_2965 PF11761 Cobalamin biosynthesis central region Dsui_2965 PF01890 Cobalamin synthesis G C-terminus Dsui_2967 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases Dsui_2967 PF01077 Nitrite and sulphite reductase 4Fe-4S domain Dsui_2969 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases Dsui_2969 PF10414 Sirohaem synthase dimerisation region Dsui_2969 PF14824 Sirohaem biosynthesis protein central Dsui_2971 PF01734 Patatin-like phospholipase Dsui_2972 PF03588 Leucyl/phenylalanyl-tRNA protein transferase Dsui_2973 PF04376 Arginine-tRNA-protein transferase, N terminus Dsui_2973 PF04377 Arginine-tRNA-protein transferase, C terminus Dsui_2975 PF07715 TonB-dependent Receptor Plug Domain Dsui_2975 PF00593 TonB dependent receptor Dsui_2977 PF08281 Sigma-70, region 4 Dsui_2977 PF04542 Sigma-70 region 2 Dsui_2978 PF01180 Dihydroorotate dehydrogenase Dsui_2979 PF02508 Rnf-Nqr subunit, membrane protein Dsui_2980 PF04060 Putative Fe-S cluster Dsui_2981 PF12838 4Fe-4S dicluster domain Dsui_2981 PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit Dsui_2981 PF13375 RnfC Barrel sandwich hybrid domain Dsui_2982 PF03116 NQR2, RnfD, RnfE family Dsui_2983 PF04205 FMN-binding domain Dsui_2984 PF02508 Rnf-Nqr subunit, membrane protein Dsui_2985 PF00730 HhH-GPD superfamily base excision DNA repair protein Dsui_2985 PF00633 Helix-hairpin-helix motif Dsui_2985 PF10576 Iron-sulfur binding domain of endonuclease III Dsui_2989 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain Dsui_2989 PF08447 PAS fold Dsui_2990 PF00004 ATPase family associated with various cellular activities (AAA) Dsui_2990 PF01434 Peptidase family M41 Dsui_2990 PF17862 AAA+ lid domain Dsui_2991 PF00072 Response regulator receiver domain Dsui_2991 PF00990 Diguanylate cyclase, GGDEF domain Dsui_2994 PF00300 Histidine phosphatase superfamily (branch 1) Dsui_2996 PF00437 Type II/IV secretion system protein Dsui_2999 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase Dsui_2999 PF00512 His Kinase A (phospho-acceptor) domain Dsui_2999 PF00989 PAS fold Dsui_3000 PF00072 Response regulator receiver domain Dsui_3001 PF00072 Response regulator receiver domain Dsui_3002 PF00989 PAS fold Dsui_3002 PF00512 His Kinase A (phospho-acceptor) domain Dsui_3002 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase Dsui_3003 PF00183 Hsp90 protein Dsui_3003 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase Dsui_3004 PF00990 Diguanylate cyclase, GGDEF domain Dsui_3004 PF00072 Response regulator receiver domain Dsui_3005 PF03449 Transcription elongation factor, N-terminal Dsui_3005 PF01272 Transcription elongation factor, GreA/GreB, C-term Dsui_3006 PF11939 [NiFe]-hydrogenase assembly, chaperone, HybE Dsui_3007 PF01455 HupF/HypC family Dsui_3008 PF01750 Hydrogenase maturation protease Dsui_3009 PF00374 Nickel-dependent hydrogenase Dsui_3010 PF03916 Polysulphide reductase, NrfD Dsui_3011 PF13247 4Fe-4S dicluster domain Dsui_3012 PF01058 NADH ubiquinone oxidoreductase, 20 Kd subunit Dsui_3012 PF14720 NiFe/NiFeSe hydrogenase small subunit C-terminal Dsui_3018 PF01053 Cys/Met metabolism PLP-dependent enzyme Dsui_3019 PF12697 Alpha/beta hydrolase family Dsui_3023 PF01384 Phosphate transporter family Dsui_3027 PF00374 Nickel-dependent hydrogenase Dsui_3028 PF01058 NADH ubiquinone oxidoreductase, 20 Kd subunit Dsui_3029 PF10588 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region Dsui_3030 PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit Dsui_3030 PF10589 NADH-ubiquinone oxidoreductase-F iron-sulfur binding region Dsui_3032 PF01515 Phosphate acetyl/butaryl transferase Dsui_3033 PF00871 Acetokinase family Dsui_3034 PF03477 ATP cone domain Dsui_3034 PF02867 Ribonucleotide reductase, barrel domain Dsui_3034 PF00317 Ribonucleotide reductase, all-alpha domain Dsui_3035 PF00990 Diguanylate cyclase, GGDEF domain Dsui_3035 PF17151 Periplasmic sensor domain Dsui_3036 PF00293 NUDIX domain Dsui_3037 PF00361 Proton-conducting membrane transporter Dsui_3038 PF01059 NADH-ubiquinone oxidoreductase chain 4, amino terminus Dsui_3038 PF00361 Proton-conducting membrane transporter Dsui_3039 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus Dsui_3039 PF00361 Proton-conducting membrane transporter Dsui_3040 PF00420 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L Dsui_3041 PF00499 NADH-ubiquinone/plastoquinone oxidoreductase chain 6 Dsui_3042 PF12838 4Fe-4S dicluster domain Dsui_3043 PF00146 NADH dehydrogenase Dsui_3044 PF00384 Molybdopterin oxidoreductase Dsui_3044 PF10588 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region Dsui_3044 PF09326 NADH-ubiquinone oxidoreductase subunit G, C-terminal Dsui_3045 PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit Dsui_3045 PF10589 NADH-ubiquinone oxidoreductase-F iron-sulfur binding region Dsui_3045 PF10531 SLBB domain Dsui_3047 PF00346 Respiratory-chain NADH dehydrogenase, 49 Kd subunit Dsui_3048 PF00329 Respiratory-chain NADH dehydrogenase, 30 Kd subunit Dsui_3049 PF01058 NADH ubiquinone oxidoreductase, 20 Kd subunit Dsui_3050 PF00507 NADH-ubiquinone/plastoquinone oxidoreductase, chain 3 Dsui_3052 PF00121 Triosephosphate isomerase Dsui_3053 PF00005 ABC transporter Dsui_3054 PF00528 Binding-protein-dependent transport system inner membrane component Dsui_3055 PF00528 Binding-protein-dependent transport system inner membrane component Dsui_3056 PF12849 PBP superfamily domain Dsui_3057 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain Dsui_3057 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III Dsui_3057 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II Dsui_3057 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I Dsui_3058 PF00809 Pterin binding enzyme Dsui_3059 PF00004 ATPase family associated with various cellular activities (AAA) Dsui_3059 PF17862 AAA+ lid domain Dsui_3059 PF06480 FtsH Extracellular Dsui_3059 PF01434 Peptidase family M41 Dsui_3060 PF01728 FtsJ-like methyltransferase Dsui_3061 PF01985 CRS1 / YhbY (CRM) domain Dsui_3063 PF01272 Transcription elongation factor, GreA/GreB, C-term Dsui_3063 PF03449 Transcription elongation factor, N-terminal Dsui_3064 PF02142 MGS-like domain Dsui_3064 PF02787 Carbamoyl-phosphate synthetase large chain, oligomerisation domain Dsui_3064 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain Dsui_3065 PF00117 Glutamine amidotransferase class-I Dsui_3065 PF00988 Carbamoyl-phosphate synthase small chain, CPSase domain Dsui_3066 PF01113 Dihydrodipicolinate reductase, N-terminus Dsui_3066 PF05173 Dihydrodipicolinate reductase, C-terminus Dsui_3067 PF04355 SmpA / OmlA family Dsui_3068 PF01475 Ferric uptake regulator family Dsui_3069 PF01169 Uncharacterized protein family UPF0016 Dsui_3072 PF02463 RecF/RecN/SMC N terminal domain Dsui_3073 PF01513 ATP-NAD kinase Dsui_3074 PF01628 HrcA protein C terminal domain Dsui_3074 PF03444 Winged helix-turn-helix transcription repressor, HrcA DNA-binding Dsui_3075 PF00762 Ferrochelatase Dsui_3076 PF00085 Thioredoxin Dsui_3078 PF00672 HAMP domain Dsui_3078 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain Dsui_3078 PF17200 Single Cache domain 2 Dsui_3079 PF03793 PASTA domain Dsui_3079 PF00069 Protein kinase domain Dsui_3080 PF01025 GrpE Dsui_3081 PF00012 Hsp70 protein Dsui_3082 PF00226 DnaJ domain Dsui_3082 PF01556 DnaJ C terminal domain Dsui_3082 PF00684 DnaJ central domain Dsui_3084 PF01406 tRNA synthetases class I (C) catalytic domain Dsui_3084 PF09190 DALR domain Dsui_3087 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD Dsui_3088 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD Dsui_3089 PF00149 Calcineurin-like phosphoesterase Dsui_3091 PF03741 Integral membrane protein TerC family Dsui_3092 PF00570 HRDC domain Dsui_3092 PF00270 DEAD/DEAH box helicase Dsui_3092 PF00271 Helicase conserved C-terminal domain Dsui_3092 PF16124 RecQ zinc-binding Dsui_3092 PF09382 RQC domain Dsui_3094 PF01966 HD domain Dsui_3097 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain Dsui_3097 PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain Dsui_3097 PF02805 Metal binding domain of Ada Dsui_3097 PF12833 Helix-turn-helix domain Dsui_3098 PF13532 2OG-Fe(II) oxygenase superfamily Dsui_3101 PF03466 LysR substrate binding domain Dsui_3101 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family Dsui_3102 PF12804 MobA-like NTP transferase domain Dsui_3104 PF03707 Bacterial signalling protein N terminal repeat Dsui_3104 PF00563 EAL domain Dsui_3104 PF00990 Diguanylate cyclase, GGDEF domain Dsui_3105 PF03471 Transporter associated domain Dsui_3105 PF00571 CBS domain Dsui_3105 PF01595 Cyclin M transmembrane N-terminal domain Dsui_3107 PF00753 Metallo-beta-lactamase superfamily Dsui_3108 PF03707 Bacterial signalling protein N terminal repeat Dsui_3108 PF00563 EAL domain Dsui_3108 PF00990 Diguanylate cyclase, GGDEF domain Dsui_3108 PF13188 PAS domain Dsui_3109 PF00034 Cytochrome c Dsui_3110 PF00115 Cytochrome C and Quinol oxidase polypeptide I Dsui_3113 PF03707 Bacterial signalling protein N terminal repeat Dsui_3113 PF00990 Diguanylate cyclase, GGDEF domain Dsui_3113 PF00563 EAL domain Dsui_3114 PF00510 Cytochrome c oxidase subunit III Dsui_3116 PF08406 CbbQ/NirQ/NorQ C-terminal Dsui_3116 PF07728 AAA domain (dynein-related subfamily) Dsui_3122 PF08447 PAS fold Dsui_3122 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain Dsui_3123 PF00672 HAMP domain Dsui_3123 PF02743 Cache domain Dsui_3123 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain Dsui_3124 PF00072 Response regulator receiver domain Dsui_3126 PF04055 Radical SAM superfamily Dsui_3126 PF06463 Molybdenum Cofactor Synthesis C Dsui_3127 PF00849 RNA pseudouridylate synthase Dsui_3127 PF04287 tRNA pseudouridine synthase C Dsui_3128 PF17876 Cold shock domain Dsui_3128 PF08461 Ribonuclease R winged-helix domain Dsui_3128 PF08206 Ribonuclease B OB domain Dsui_3128 PF00575 S1 RNA binding domain Dsui_3128 PF00773 RNB domain Dsui_3131 PF00709 Adenylosuccinate synthetase Dsui_3132 PF13393 Histidyl-tRNA synthetase Dsui_3134 PF01145 SPFH domain / Band 7 family Dsui_3135 PF01145 SPFH domain / Band 7 family Dsui_3135 PF12221 Bacterial membrane protein N terminal Dsui_3136 PF13167 GTP-binding GTPase N-terminal Dsui_3136 PF01926 50S ribosome-binding GTPase Dsui_3136 PF16360 GTP-binding GTPase Middle Region Dsui_3137 PF17209 Hfq protein Dsui_3138 PF14714 KH-domain-like of EngA bacterial GTPase enzymes, C-terminal Dsui_3138 PF01926 50S ribosome-binding GTPase Dsui_3139 PF13360 PQQ-like domain Dsui_3140 PF09976 Tetratricopeptide repeat-like domain Dsui_3141 PF13393 Histidyl-tRNA synthetase Dsui_3141 PF03129 Anticodon binding domain Dsui_3142 PF04551 GcpE protein Dsui_3143 PF13464 Domain of unknown function (DUF4115) Dsui_3145 PF04055 Radical SAM superfamily Dsui_3146 PF00334 Nucleoside diphosphate kinase Dsui_3149 PF01012 Electron transfer flavoprotein domain Dsui_3149 PF00766 Electron transfer flavoprotein FAD-binding domain Dsui_3150 PF01012 Electron transfer flavoprotein domain Dsui_3151 PF00072 Response regulator receiver domain Dsui_3151 PF00486 Transcriptional regulatory protein, C terminal Dsui_3152 PF13493 Domain of unknown function (DUF4118) Dsui_3152 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase Dsui_3152 PF00512 His Kinase A (phospho-acceptor) domain Dsui_3152 PF02702 Osmosensitive K+ channel His kinase sensor domain Dsui_3152 PF13492 GAF domain Dsui_3153 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component Dsui_3154 PF04290 Tripartite ATP-independent periplasmic transporters, DctQ component Dsui_3155 PF03480 Bacterial extracellular solute-binding protein, family 7 Dsui_3158 PF00375 Sodium:dicarboxylate symporter family Dsui_3159 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase Dsui_3159 PF00989 PAS fold Dsui_3159 PF00512 His Kinase A (phospho-acceptor) domain Dsui_3160 PF00196 Bacterial regulatory proteins, luxR family Dsui_3160 PF00072 Response regulator receiver domain Dsui_3161 PF00990 Diguanylate cyclase, GGDEF domain Dsui_3161 PF03707 Bacterial signalling protein N terminal repeat Dsui_3161 PF00563 EAL domain Dsui_3162 PF07715 TonB-dependent Receptor Plug Domain Dsui_3162 PF00593 TonB dependent receptor Dsui_3164 PF00990 Diguanylate cyclase, GGDEF domain Dsui_3164 PF00072 Response regulator receiver domain Dsui_3165 PF01171 PP-loop family Dsui_3165 PF09179 TilS substrate binding domain Dsui_3165 PF11734 TilS substrate C-terminal domain Dsui_3166 PF03255 Acetyl co-enzyme A carboxylase carboxyltransferase alpha subunit Dsui_3167 PF13188 PAS domain Dsui_3167 PF03707 Bacterial signalling protein N terminal repeat Dsui_3167 PF00990 Diguanylate cyclase, GGDEF domain Dsui_3167 PF00563 EAL domain Dsui_3173 PF03466 LysR substrate binding domain Dsui_3173 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family Dsui_3174 PF00271 Helicase conserved C-terminal domain Dsui_3174 PF00270 DEAD/DEAH box helicase Dsui_3175 PF02321 Outer membrane efflux protein Dsui_3176 PF13533 Biotin-lipoyl like Dsui_3177 PF02687 FtsX-like permease family Dsui_3177 PF00005 ABC transporter Dsui_3177 PF12704 MacB-like periplasmic core domain Dsui_3178 PF02687 FtsX-like permease family Dsui_3178 PF00005 ABC transporter Dsui_3178 PF12704 MacB-like periplasmic core domain Dsui_3179 PF00672 HAMP domain Dsui_3179 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase Dsui_3179 PF00512 His Kinase A (phospho-acceptor) domain Dsui_3180 PF00486 Transcriptional regulatory protein, C terminal Dsui_3180 PF00072 Response regulator receiver domain Dsui_3181 PF00529 HlyD membrane-fusion protein of T1SS Dsui_3181 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion Dsui_3182 PF00873 AcrB/AcrD/AcrF family Dsui_3183 PF02321 Outer membrane efflux protein Dsui_3185 PF01053 Cys/Met metabolism PLP-dependent enzyme Dsui_3186 PF00156 Phosphoribosyl transferase domain Dsui_3189 PF02875 Mur ligase family, glutamate ligase domain Dsui_3189 PF08245 Mur ligase middle domain Dsui_3190 PF17848 Acetyl-coA carboxylase zinc finger domain Dsui_3190 PF01039 Carboxyl transferase domain Dsui_3191 PF00290 Tryptophan synthase alpha chain Dsui_3192 PF00291 Pyridoxal-phosphate dependent enzyme Dsui_3193 PF00697 N-(5'phosphoribosyl)anthranilate (PRA) isomerase Dsui_3194 PF01416 tRNA pseudouridine synthase Dsui_3197 PF01118 Semialdehyde dehydrogenase, NAD binding domain Dsui_3197 PF02774 Semialdehyde dehydrogenase, dimerisation domain Dsui_3198 PF00180 Isocitrate/isopropylmalate dehydrogenase Dsui_3199 PF00694 Aconitase C-terminal domain Dsui_3201 PF00330 Aconitase family (aconitate hydratase) Dsui_3203 PF12832 MFS_1 like family Dsui_3204 PF01264 Chorismate synthase Dsui_3205 PF00849 RNA pseudouridylate synthase Dsui_3208 PF00291 Pyridoxal-phosphate dependent enzyme Dsui_3211 PF00208 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase Dsui_3211 PF02812 Glu/Leu/Phe/Val dehydrogenase, dimerisation domain Dsui_3212 PF13193 AMP-binding enzyme C-terminal domain Dsui_3212 PF00501 AMP-binding enzyme Dsui_3214 PF12705 PD-(D/E)XK nuclease superfamily Dsui_3214 PF00580 UvrD/REP helicase N-terminal domain Dsui_3214 PF13361 UvrD-like helicase C-terminal domain Dsui_3216 PF11953 Domain of unknown function (DUF3470) Dsui_3216 PF00037 4Fe-4S binding domain Dsui_3217 PF00085 Thioredoxin Dsui_3218 PF07498 Rho termination factor, N-terminal domain Dsui_3218 PF07497 Rho termination factor, RNA-binding domain Dsui_3218 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain Dsui_3219 PF01197 Ribosomal protein L31 Dsui_3222 PF00929 Exonuclease Dsui_3224 PF01329 Pterin 4 alpha carbinolamine dehydratase Dsui_3225 PF03193 RsgA GTPase Dsui_3226 PF05971 RNA methyltransferase Dsui_3227 PF08502 LeuA allosteric (dimerisation) domain Dsui_3227 PF00682 HMGL-like Dsui_3228 PF01037 Lrp/AsnC ligand binding domain Dsui_3229 PF01841 Transglutaminase-like superfamily Dsui_3229 PF08379 Bacterial transglutaminase-like N-terminal region Dsui_3230 PF04168 A predicted alpha-helical domain with a conserved ER motif. Dsui_3230 PF14403 Circularly permuted ATP-grasp type 2 Dsui_3232 PF17516 ProQ C-terminal domain Dsui_3232 PF04352 ProQ/FINO family Dsui_3235 PF14403 Circularly permuted ATP-grasp type 2 Dsui_3235 PF04168 A predicted alpha-helical domain with a conserved ER motif. Dsui_3236 PF14403 Circularly permuted ATP-grasp type 2 Dsui_3237 PF13675 Type IV pili methyl-accepting chemotaxis transducer N-term Dsui_3237 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain Dsui_3238 PF08447 PAS fold Dsui_3238 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain Dsui_3239 PF02803 Thiolase, C-terminal domain Dsui_3239 PF00108 Thiolase, N-terminal domain Dsui_3241 PF00293 NUDIX domain Dsui_3244 PF00988 Carbamoyl-phosphate synthase small chain, CPSase domain Dsui_3244 PF00117 Glutamine amidotransferase class-I Dsui_3245 PF04461 Protein of unknown function (DUF520) Dsui_3246 PF06865 Pyrimidine/purine nucleoside phosphorylase Dsui_3248 PF00764 Arginosuccinate synthase Dsui_3249 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain Dsui_3249 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain Dsui_3250 PF00202 Aminotransferase class-III Dsui_3251 PF13614 AAA domain Dsui_3254 PF01649 Ribosomal protein S20 Dsui_3255 PF03023 Lipid II flippase MurJ Dsui_3256 PF01161 Phosphatidylethanolamine-binding protein Dsui_3257 PF00155 Aminotransferase class I and II Dsui_3260 PF03030 Inorganic H+ pyrophosphatase Dsui_3261 PF00365 Phosphofructokinase Dsui_3262 PF05191 Adenylate kinase, active site lid Dsui_3263 PF02348 Cytidylyltransferase Dsui_3264 PF03966 Trm112p-like protein Dsui_3265 PF02606 Tetraacyldisaccharide-1-P 4'-kinase Dsui_3266 PF02472 Biopolymer transport protein ExbD/TolR Dsui_3267 PF01618 MotA/TolQ/ExbB proton channel family Dsui_3268 PF13742 OB-fold nucleic acid binding domain Dsui_3268 PF02601 Exonuclease VII, large subunit Dsui_3269 PF02777 Iron/manganese superoxide dismutases, C-terminal domain Dsui_3269 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain Dsui_3271 PF10431 C-terminal, D2-small domain, of ClpB protein Dsui_3271 PF07724 AAA domain (Cdc48 subfamily) Dsui_3271 PF06689 ClpX C4-type zinc finger Dsui_3272 PF01810 LysE type translocator Dsui_3273 PF00484 Carbonic anhydrase Dsui_3278 PF04055 Radical SAM superfamily Dsui_3278 PF06463 Molybdenum Cofactor Synthesis C Dsui_3279 PF02634 FdhD/NarQ family Dsui_3280 PF01292 Prokaryotic cytochrome b561 Dsui_3281 PF13247 4Fe-4S dicluster domain Dsui_3281 PF09163 Formate dehydrogenase N, transmembrane Dsui_3282 PF01568 Molydopterin dinucleotide binding domain Dsui_3282 PF00384 Molybdopterin oxidoreductase Dsui_3282 PF04879 Molybdopterin oxidoreductase Fe4S4 domain Dsui_3283 PF04216 Protein involved in formate dehydrogenase formation Dsui_3285 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase Dsui_3285 PF00512 His Kinase A (phospho-acceptor) domain Dsui_3285 PF00989 PAS fold Dsui_3285 PF13426 PAS domain Dsui_3285 PF13188 PAS domain Dsui_3286 PF02954 Bacterial regulatory protein, Fis family Dsui_3286 PF00158 Sigma-54 interaction domain Dsui_3286 PF00072 Response regulator receiver domain Dsui_3287 PF00072 Response regulator receiver domain Dsui_3288 PF01740 STAS domain Dsui_3290 PF04345 Chorismate lyase Dsui_3293 PF00849 RNA pseudouridylate synthase Dsui_3294 PF06315 Isocitrate dehydrogenase kinase/phosphatase (AceK) Dsui_3295 PF03971 Monomeric isocitrate dehydrogenase Dsui_3296 PF00180 Isocitrate/isopropylmalate dehydrogenase Dsui_3297 PF00881 Nitroreductase family Dsui_3298 PF00999 Sodium/hydrogen exchanger family Dsui_3298 PF02254 TrkA-N domain Dsui_3299 PF08534 Redoxin Dsui_3302 PF00005 ABC transporter Dsui_3303 PF13237 4Fe-4S dicluster domain Dsui_3303 PF12801 4Fe-4S binding domain Dsui_3304 PF12838 4Fe-4S dicluster domain Dsui_3304 PF12800 4Fe-4S binding domain Dsui_3308 PF00034 Cytochrome c Dsui_3309 PF18793 Nitrous oxide reductase propeller repeat 2 Dsui_3309 PF13473 Cupredoxin-like domain Dsui_3309 PF18764 Nitrous oxide reductase propeller repeat Dsui_3311 PF02630 SCO1/SenC Dsui_3314 PF02472 Biopolymer transport protein ExbD/TolR Dsui_3315 PF01618 MotA/TolQ/ExbB proton channel family Dsui_3318 PF13442 Cytochrome C oxidase, cbb3-type, subunit III Dsui_3319 PF10414 Sirohaem synthase dimerisation region Dsui_3319 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases Dsui_3319 PF14824 Sirohaem biosynthesis protein central Dsui_3320 PF01040 UbiA prenyltransferase family Dsui_3322 PF02547 Queuosine biosynthesis protein Dsui_3323 PF01702 Queuine tRNA-ribosyltransferase Dsui_3324 PF02699 Preprotein translocase subunit Dsui_3325 PF13721 SecD export protein N-terminal TM region Dsui_3325 PF02355 Protein export membrane protein Dsui_3325 PF07549 SecD/SecF GG Motif Dsui_3326 PF07549 SecD/SecF GG Motif Dsui_3326 PF02355 Protein export membrane protein Dsui_3328 PF01322 Cytochrome C' Dsui_3331 PF00206 Lyase Dsui_3331 PF08328 Adenylosuccinate lyase C-terminal Dsui_3332 PF13417 Glutathione S-transferase, N-terminal domain Dsui_3332 PF00043 Glutathione S-transferase, C-terminal domain Dsui_3333 PF00072 Response regulator receiver domain Dsui_3333 PF02954 Bacterial regulatory protein, Fis family Dsui_3333 PF00158 Sigma-54 interaction domain Dsui_3334 PF00563 EAL domain Dsui_3334 PF03707 Bacterial signalling protein N terminal repeat Dsui_3334 PF00990 Diguanylate cyclase, GGDEF domain Dsui_3335 PF00158 Sigma-54 interaction domain Dsui_3335 PF02954 Bacterial regulatory protein, Fis family Dsui_3335 PF00072 Response regulator receiver domain Dsui_3339 PF01063 Amino-transferase class IV Dsui_3341 PF01075 Glycosyltransferase family 9 (heptosyltransferase) Dsui_3343 PF00561 alpha/beta hydrolase fold Dsui_3344 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I Dsui_3344 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain Dsui_3344 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III Dsui_3344 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II Dsui_3345 PF00563 EAL domain Dsui_3345 PF08668 HDOD domain Dsui_3346 PF08668 HDOD domain Dsui_3346 PF00563 EAL domain Dsui_3351 PF03150 Di-haem cytochrome c peroxidase Dsui_3351 PF00034 Cytochrome c Dsui_3351 PF14376 Haem-binding domain Dsui_3352 PF13545 Crp-like helix-turn-helix domain Dsui_3352 PF00027 Cyclic nucleotide-binding domain Dsui_3354 PF01555 DNA methylase Dsui_3354 PF18273 Type III R-M EcoP15I C-terminal domain Dsui_3356 PF00004 ATPase family associated with various cellular activities (AAA) Dsui_3356 PF05362 Lon protease (S16) C-terminal proteolytic domain Dsui_3356 PF02190 ATP-dependent protease La (LON) substrate-binding domain Dsui_3359 PF16473 3' exoribonuclease, RNase T-like Dsui_3364 PF01411 tRNA synthetases class II (A) Dsui_3364 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain Dsui_3364 PF02272 DHHA1 domain Dsui_3366 PF03009 Glycerophosphoryl diester phosphodiesterase family Dsui_3367 PF13416 Bacterial extracellular solute-binding protein Dsui_3369 PF02770 Acyl-CoA dehydrogenase, middle domain Dsui_3369 PF00441 Acyl-CoA dehydrogenase, C-terminal domain Dsui_3369 PF02771 Acyl-CoA dehydrogenase, N-terminal domain Dsui_3371 PF00248 Aldo/keto reductase family Dsui_3373 PF02690 Na+/Pi-cotransporter Dsui_3376 PF00155 Aminotransferase class I and II Dsui_3379 PF01008 Initiation factor 2 subunit family Dsui_3380 PF00596 Class II Aldolase and Adducin N-terminal domain Dsui_3383 PF13545 Crp-like helix-turn-helix domain Dsui_3383 PF00027 Cyclic nucleotide-binding domain Dsui_3384 PF00999 Sodium/hydrogen exchanger family Dsui_3384 PF02254 TrkA-N domain Dsui_3384 PF02080 TrkA-C domain Dsui_3386 PF00196 Bacterial regulatory proteins, luxR family Dsui_3386 PF00072 Response regulator receiver domain Dsui_3387 PF00512 His Kinase A (phospho-acceptor) domain Dsui_3387 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase Dsui_3387 PF00989 PAS fold Dsui_3389 PF00378 Enoyl-CoA hydratase/isomerase Dsui_3391 PF07722 Peptidase C26 Dsui_3392 PF04107 Glutamate-cysteine ligase family 2(GCS2) Dsui_3394 PF00690 Cation transporter/ATPase, N-terminus Dsui_3394 PF00689 Cation transporting ATPase, C-terminus Dsui_3395 PF07690 Major Facilitator Superfamily Dsui_3396 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family Dsui_3396 PF03466 LysR substrate binding domain Dsui_3398 PF00665 Integrase core domain Dsui_3398 PF13936 Helix-turn-helix domain Dsui_3401 PF01523 Putative modulator of DNA gyrase Dsui_3402 PF00795 Carbon-nitrogen hydrolase Dsui_3404 PF03710 Glutamate-ammonia ligase adenylyltransferase Dsui_3404 PF08335 GlnD PII-uridylyltransferase Dsui_3406 PF00271 Helicase conserved C-terminal domain Dsui_3406 PF00270 DEAD/DEAH box helicase Dsui_3407 PF05175 Methyltransferase small domain Dsui_3413 PF02754 Cysteine-rich domain Dsui_3413 PF13183 4Fe-4S dicluster domain Dsui_3414 PF01565 FAD binding domain Dsui_3415 PF01565 FAD binding domain Dsui_3415 PF02913 FAD linked oxidases, C-terminal domain Dsui_3418 PF01925 Sulfite exporter TauE/SafE Dsui_3421 PF05161 MOFRL family Dsui_3421 PF13660 Domain of unknown function (DUF4147) Dsui_3422 PF01814 Hemerythrin HHE cation binding domain Dsui_3423 PF01261 Xylose isomerase-like TIM barrel Dsui_3424 PF01923 Cobalamin adenosyltransferase Dsui_3425 PF01042 Endoribonuclease L-PSP Dsui_3426 PF03466 LysR substrate binding domain Dsui_3426 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family Dsui_3427 PF00857 Isochorismatase family Dsui_3428 PF12833 Helix-turn-helix domain Dsui_3428 PF01965 DJ-1/PfpI family Dsui_3429 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion Dsui_3429 PF00529 HlyD membrane-fusion protein of T1SS Dsui_3430 PF00873 AcrB/AcrD/AcrF family Dsui_3434 PF09857 Putative toxin of bacterial toxin-antitoxin pair Dsui_3436 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase Dsui_3436 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase Dsui_3437 PF03707 Bacterial signalling protein N terminal repeat Dsui_3437 PF00563 EAL domain Dsui_3437 PF00990 Diguanylate cyclase, GGDEF domain Dsui_3438 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase Dsui_3438 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase Dsui_3439 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain Dsui_3439 PF00672 HAMP domain Dsui_3439 PF02743 Cache domain Dsui_3441 PF00873 AcrB/AcrD/AcrF family Dsui_3442 PF07992 Pyridine nucleotide-disulphide oxidoreductase Dsui_3443 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion Dsui_3444 PF00793 DAHP synthetase I family Dsui_3446 PF01040 UbiA prenyltransferase family Dsui_3447 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase Dsui_3447 PF00512 His Kinase A (phospho-acceptor) domain Dsui_3447 PF08521 Two-component sensor kinase N-terminal Dsui_3448 PF00072 Response regulator receiver domain Dsui_3448 PF00486 Transcriptional regulatory protein, C terminal Dsui_3449 PF00563 EAL domain Dsui_3449 PF03707 Bacterial signalling protein N terminal repeat Dsui_3449 PF00990 Diguanylate cyclase, GGDEF domain Dsui_3450 PF13336 Acetyl-CoA hydrolase/transferase C-terminal domain Dsui_3450 PF02550 Acetyl-CoA hydrolase/transferase N-terminal domain Dsui_3451 PF07690 Major Facilitator Superfamily Dsui_3452 PF01467 Cytidylyltransferase-like Dsui_3453 PF01545 Cation efflux family Dsui_3455 PF01966 HD domain Dsui_3457 PF02705 K+ potassium transporter Dsui_3458 PF05209 Septum formation inhibitor MinC, N-terminal domain Dsui_3458 PF03775 Septum formation inhibitor MinC, C-terminal domain Dsui_3459 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain Dsui_3460 PF03776 Septum formation topological specificity factor MinE Dsui_3463 PF00528 Binding-protein-dependent transport system inner membrane component Dsui_3464 PF00005 ABC transporter Dsui_3465 PF02743 Cache domain Dsui_3465 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase Dsui_3465 PF00512 His Kinase A (phospho-acceptor) domain Dsui_3467 PF00072 Response regulator receiver domain Dsui_3467 PF00158 Sigma-54 interaction domain Dsui_3467 PF02954 Bacterial regulatory protein, Fis family Dsui_3468 PF00072 Response regulator receiver domain Dsui_3469 PF00196 Bacterial regulatory proteins, luxR family Dsui_3469 PF00072 Response regulator receiver domain Dsui_3471 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain Dsui_3471 PF13426 PAS domain Dsui_3471 PF08447 PAS fold Dsui_3472 PF00072 Response regulator receiver domain Dsui_3474 PF09078 CheY binding Dsui_3474 PF01627 Hpt domain Dsui_3474 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase Dsui_3474 PF01584 CheW-like domain Dsui_3474 PF02895 Signal transducing histidine kinase, homodimeric domain Dsui_3475 PF00672 HAMP domain Dsui_3475 PF02203 Tar ligand binding domain homologue Dsui_3475 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain Dsui_3476 PF01584 CheW-like domain Dsui_3477 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase Dsui_3477 PF00512 His Kinase A (phospho-acceptor) domain Dsui_3479 PF00436 Single-strand binding protein family Dsui_3480 PF07690 Major Facilitator Superfamily Dsui_3481 PF10415 Fumarase C C-terminus Dsui_3481 PF00206 Lyase Dsui_3482 PF00375 Sodium:dicarboxylate symporter family Dsui_3483 PF06942 GlpM protein Dsui_3484 PF01925 Sulfite exporter TauE/SafE Dsui_3485 PF00512 His Kinase A (phospho-acceptor) domain Dsui_3485 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase Dsui_3485 PF02743 Cache domain Dsui_3486 PF00158 Sigma-54 interaction domain Dsui_3486 PF02954 Bacterial regulatory protein, Fis family Dsui_3486 PF00072 Response regulator receiver domain Dsui_3492 PF05567 Neisseria PilC beta-propeller domain Dsui_3494 PF02401 LytB protein Dsui_3495 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase Dsui_3496 PF00174 Oxidoreductase molybdopterin binding domain Dsui_3497 PF01252 Signal peptidase (SPase) II Dsui_3498 PF08264 Anticodon-binding domain of tRNA Dsui_3498 PF00133 tRNA synthetases class I (I, L, M and V) Dsui_3498 PF06827 Zinc finger found in FPG and IleRS Dsui_3499 PF01687 Riboflavin kinase Dsui_3499 PF06574 FAD synthetase Dsui_3500 PF11741 AMIN domain Dsui_3500 PF01520 N-acetylmuramoyl-L-alanine amidase Dsui_3501 PF02367 Threonylcarbamoyl adenosine biosynthesis protein TsaE Dsui_3502 PF08331 Domain of unknown function (DUF1730) Dsui_3504 PF00581 Rhodanese-like domain Dsui_3508 PF02609 Exonuclease VII small subunit Dsui_3509 PF00348 Polyprenyl synthetase Dsui_3510 PF13292 1-deoxy-D-xylulose-5-phosphate synthase Dsui_3510 PF02779 Transketolase, pyrimidine binding domain Dsui_3510 PF02780 Transketolase, C-terminal domain Dsui_3511 PF02649 Type I GTP cyclohydrolase folE2 Dsui_3512 PF01245 Ribosomal protein L19 Dsui_3513 PF01746 tRNA (Guanine-1)-methyltransferase Dsui_3514 PF05239 PRC-barrel domain Dsui_3514 PF01782 RimM N-terminal domain Dsui_3515 PF00886 Ribosomal protein S16 Dsui_3517 PF03631 Virulence factor BrkB Dsui_3519 PF08502 LeuA allosteric (dimerisation) domain Dsui_3519 PF00682 HMGL-like Dsui_3520 PF00873 AcrB/AcrD/AcrF family Dsui_3523 PF00486 Transcriptional regulatory protein, C terminal Dsui_3523 PF00072 Response regulator receiver domain Dsui_3524 PF08521 Two-component sensor kinase N-terminal Dsui_3524 PF00512 His Kinase A (phospho-acceptor) domain Dsui_3524 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase Dsui_3525 PF01066 CDP-alcohol phosphatidyltransferase Dsui_3526 PF02666 Phosphatidylserine decarboxylase Dsui_3527 PF07991 Acetohydroxy acid isomeroreductase, NADPH-binding domain Dsui_3527 PF01450 Acetohydroxy acid isomeroreductase, catalytic domain Dsui_3528 PF10369 Small subunit of acetolactate synthase Dsui_3529 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain Dsui_3529 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain Dsui_3529 PF00205 Thiamine pyrophosphate enzyme, central domain Dsui_3535 PF03739 Lipopolysaccharide export system permease LptF/LptG Dsui_3536 PF02789 Cytosol aminopeptidase family, N-terminal domain Dsui_3536 PF00883 Cytosol aminopeptidase family, catalytic domain Dsui_3539 PF10458 Valyl tRNA synthetase tRNA binding arm Dsui_3539 PF00133 tRNA synthetases class I (I, L, M and V) Dsui_3539 PF08264 Anticodon-binding domain of tRNA