locus-tag	class	description
Dsui_0002	COG0425	Belongs to the sulfur carrier protein TusA family
Dsui_0003	COG4783	chaperone-mediated protein folding
Dsui_0004	COG0315	cyclic pyranopterin monophosphate synthase activity
Dsui_0007	COG1278	Cold shock
Dsui_0008	COG2127	Involved in the modulation of the specificity of the ClpAP-mediated ATP-dependent protein degradation
Dsui_0009	COG0542	response to heat
Dsui_0010	COG0684	Catalyzes the aldol cleavage of 4-hydroxy-4-methyl-2- oxoglutarate (HMG) into 2 molecules of pyruvate. Also contains a secondary oxaloacetate (OAA) decarboxylase activity due to the common pyruvate enolate transition state formed following C-C bond cleavage in the retro-aldol and decarboxylation reactions
Dsui_0011	COG2224	Isocitrate lyase
Dsui_0014	COG2860	membrane
Dsui_0016	COG0583	DNA-binding transcription factor activity
Dsui_0018	COG0730	response to heat
Dsui_0019	COG2225	Involved in the glycolate utilization. Catalyzes the condensation and subsequent hydrolysis of acetyl-coenzyme A (acetyl-CoA) and glyoxylate to form malate and CoA
Dsui_0020	COG0647	UMP catabolic process
Dsui_0023	COG4992	N2-acetyl-L-ornithine:2-oxoglutarate 5-aminotransferase activity
Dsui_0026	COG1253	flavin adenine dinucleotide binding
Dsui_0027	COG1380	Effector of murein hydrolase LrgA
Dsui_0028	COG1346	cytolysis
Dsui_0030	COG0670	Belongs to the BI1 family
Dsui_0031	COG2076	Multidrug Resistance protein
Dsui_0032	COG0846	NAD-dependent lysine deacetylase and desuccinylase that specifically removes acetyl and succinyl groups on target proteins. Modulates the activities of several proteins which are inactive in their acylated form
Dsui_0033	COG0501	Belongs to the peptidase M48B family
Dsui_0037	COG1804	L-carnitine dehydratase bile acid-inducible protein F
Dsui_0038	COG0537	adenosine 5'-monophosphoramidase activity
Dsui_0039	COG0030	16S rRNA (adenine(1518)-N(6)/adenine(1519)-N(6))-dimethyltransferase activity
Dsui_0040	COG2509	5-formyltetrahydrofolate cyclo-ligase activity
Dsui_0044	COG0708	Exodeoxyribonuclease III
Dsui_0046	COG0339	signal peptide processing
Dsui_0048	COG0152	phosphoribosylaminoimidazolesuccinocarboxamide synthase activity
Dsui_0051	COG0778	Nitroreductase
Dsui_0054	COG2148	undecaprenyl-phosphate glucose phosphotransferase activity
Dsui_0055	COG0438	transferase activity, transferring glycosyl groups
Dsui_0056	COG1216	Glycosyl transferase, family 2
Dsui_0059	COG1216	Glycosyl transferase, family 2
Dsui_0060	COG1089	Catalyzes the conversion of GDP-D-mannose to GDP-4- dehydro-6-deoxy-D-mannose
Dsui_0062	COG2076	Multidrug Resistance protein
Dsui_0066	COG1216	Glycosyl transferase, family 2
Dsui_0073	COG1208	COG1208 Nucleoside-diphosphate-sugar pyrophosphorylase involved in lipopolysaccharide biosynthesis translation initiation factor 2B, gamma epsilon subunits eIF-2Bgamma eIF-2Bepsilon
Dsui_0077	COG0399	UDP-4-amino-4-deoxy-L-arabinose aminotransferase
Dsui_0079	COG2089	acid synthase
Dsui_0081	COG1083	cytidylyl-transferase
Dsui_0082	COG0399	UDP-4-amino-4-deoxy-L-arabinose aminotransferase
Dsui_0083	COG1086	Polysaccharide biosynthesis protein
Dsui_0084	COG1132	(ABC) transporter
Dsui_0085	COG1089	Catalyzes the conversion of GDP-D-mannose to GDP-4- dehydro-6-deoxy-D-mannose
Dsui_0086	COG0451	ADP-glyceromanno-heptose 6-epimerase activity
Dsui_0087	COG0836	Belongs to the mannose-6-phosphate isomerase type 2 family
Dsui_0087	COG0662	Cupin 2, conserved barrel domain protein
Dsui_0089	COG0840	transmembrane signaling receptor activity
Dsui_0090	COG0009	L-threonylcarbamoyladenylate synthase
Dsui_0091	COG0026	Catalyzes the ATP-dependent conversion of 5- aminoimidazole ribonucleotide (AIR) and HCO(3)(-) to N5- carboxyaminoimidazole ribonucleotide (N5-CAIR)
Dsui_0093	COG0190	Catalyzes the oxidation of 5,10- methylenetetrahydrofolate to 5,10-methenyltetrahydrofolate and then the hydrolysis of 5,10-methenyltetrahydrofolate to 10- formyltetrahydrofolate
Dsui_0099	COG2823	Periplasmic or secreted lipoprotein
Dsui_0100	COG0279	D-glycero-D-manno-heptose 7-phosphate biosynthetic process
Dsui_0101	COG0322	excinuclease ABC activity
Dsui_0106	COG2833	Protein of unknown function (DUF455)
Dsui_0107	COG0750	zinc metalloprotease
Dsui_0110	COG2972	Histidine kinase
Dsui_0110	COG0745	RESPONSE REGULATOR receiver
Dsui_0111	COG0165	Argininosuccinate lyase
Dsui_0112	COG2815	serine threonine protein kinase
Dsui_0112	COG0515	serine threonine protein kinase
Dsui_0114	COG0004	ammonium transporteR
Dsui_0118	COG0278	Belongs to the glutaredoxin family. Monothiol subfamily
Dsui_0120	COG0216	Peptide chain release factor 1 directs the termination of translation in response to the peptide chain termination codons UAG and UAA
Dsui_0121	COG0373	Catalyzes the NADPH-dependent reduction of glutamyl- tRNA(Glu) to glutamate 1-semialdehyde (GSA)
Dsui_0122	COG1490	D-aminoacyl-tRNA deacylase activity
Dsui_0124	COG1052	Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family
Dsui_0125	COG1012	belongs to the aldehyde dehydrogenase family
Dsui_0126	COG1139	Iron-sulfur cluster binding protein
Dsui_0130	COG0281	malic enzyme
Dsui_0130	COG0280	phosphate acetyltransferase
Dsui_0131	COG1274	phosphoenolpyruvate carboxykinase (GTP) activity
Dsui_0132	COG0436	Aminotransferase
Dsui_0141	COG2896	Catalyzes the cyclization of GTP to (8S)-3',8-cyclo-7,8- dihydroguanosine 5'-triphosphate
Dsui_0145	COG3253	May function as heme-dependent peroxidase
Dsui_0146	COG3381	protein complex oligomerization
Dsui_0147	COG0737	Belongs to the 5'-nucleotidase family
Dsui_0148	COG1140	nitrate reductase beta subunit
Dsui_0149	COG5013	Belongs to the prokaryotic molybdopterin-containing oxidoreductase family
Dsui_0150	COG2204	response regulator
Dsui_0151	COG3852	Histidine kinase
Dsui_0154	COG4944	Protein of unknown function (DUF1109)
Dsui_0155	COG1595	DNA-templated transcription, initiation
Dsui_0156	COG4117	Thiosulfate reductase cytochrome B subunit (Membrane anchoring protein)
Dsui_0157	COG2041	Part of the MsrPQ system that repairs oxidized periplasmic proteins containing methionine sulfoxide residues (Met-O), using respiratory chain electrons. Thus protects these proteins from oxidative-stress damage caused by reactive species of oxygen and chlorine generated by the host defense mechanisms. MsrPQ is essential for the maintenance of envelope integrity under bleach stress, rescuing a wide series of structurally unrelated periplasmic proteins from methionine oxidation. The catalytic subunit MsrP is non-stereospecific, being able to reduce both (R-) and (S-) diastereoisomers of methionine sulfoxide
Dsui_0162	COG0142	geranyltranstransferase activity
Dsui_0163	COG0261	This protein binds to 23S rRNA in the presence of protein L20
Dsui_0164	COG0211	Belongs to the bacterial ribosomal protein bL27 family
Dsui_0165	COG0536	An essential GTPase which binds GTP, GDP and possibly (p)ppGpp with moderate affinity, with high nucleotide exchange rates and a fairly low GTP hydrolysis rate. Plays a role in control of the cell cycle, stress response, ribosome biogenesis and in those bacteria that undergo differentiation, in morphogenesis control
Dsui_0166	COG0263	Catalyzes the transfer of a phosphate group to glutamate to form L-glutamate 5-phosphate
Dsui_0167	COG3203	Forms passive diffusion pores that allow small molecular weight hydrophilic materials across the outer membrane
Dsui_0168	COG0134	indole-3-glycerol-phosphate synthase activity
Dsui_0169	COG0547	Catalyzes the transfer of the phosphoribosyl group of 5- phosphorylribose-1-pyrophosphate (PRPP) to anthranilate to yield N-(5'-phosphoribosyl)-anthranilate (PRA)
Dsui_0175	COG0419	ATPase involved in DNA repair
Dsui_0183	COG1974	Represses a number of genes involved in the response to DNA damage (SOS response), including recA and lexA. In the presence of single-stranded DNA, RecA interacts with LexA causing an autocatalytic cleavage which disrupts the DNA-binding part of LexA, leading to derepression of the SOS regulon and eventually DNA repair
Dsui_0189	COG4570	Endonuclease that resolves Holliday junction intermediates made during homologous genetic recombination and DNA repair. Exhibits sequence and structure-selective cleavage of four-way DNA junctions, where it introduces symmetrical nicks in two strands of the same polarity at the 5' side of dinucleotides. Corrects the defects in genetic recombination and DNA repair associated with inactivation of ruvAB or ruvC
Dsui_0218	COG0582	viral genome integration into host DNA
Dsui_0220	COG0546	phosphoglycolate phosphatase activity
Dsui_0222	COG2967	ApaG domain
Dsui_0223	COG2226	methyltransferase
Dsui_0226	COG1364	Catalyzes two activities which are involved in the cyclic version of arginine biosynthesis the synthesis of N- acetylglutamate from glutamate and acetyl-CoA as the acetyl donor, and of ornithine by transacetylation between N(2)-acetylornithine and glutamate
Dsui_0227	COG0653	protein targeting
Dsui_0228	COG0739	heme binding
Dsui_0231	COG0774	UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase activity
Dsui_0232	COG0206	Essential cell division protein that forms a contractile ring structure (Z ring) at the future cell division site. The regulation of the ring assembly controls the timing and the location of cell division. One of the functions of the FtsZ ring is to recruit other cell division proteins to the septum to produce a new cell wall between the dividing cells. Binds GTP and shows GTPase activity
Dsui_0234	COG1589	Essential cell division protein. May link together the upstream cell division proteins, which are predominantly cytoplasmic, with the downstream cell division proteins, which are predominantly periplasmic. May control correct divisome assembly
Dsui_0235	COG1181	Belongs to the D-alanine--D-alanine ligase family
Dsui_0236	COG0773	UDP-N-acetylmuramate-L-alanine ligase activity
Dsui_0237	COG0707	Cell wall formation. Catalyzes the transfer of a GlcNAc subunit on undecaprenyl-pyrophosphoryl-MurNAc-pentapeptide (lipid intermediate I) to form undecaprenyl-pyrophosphoryl-MurNAc- (pentapeptide)GlcNAc (lipid intermediate II)
Dsui_0238	COG0772	Belongs to the SEDS family
Dsui_0239	COG0771	Cell wall formation. Catalyzes the addition of glutamate to the nucleotide precursor UDP-N-acetylmuramoyl-L-alanine (UMA)
Dsui_0240	COG0472	First step of the lipid cycle reactions in the biosynthesis of the cell wall peptidoglycan
Dsui_0241	COG0770	UDP-N-acetylmuramoyl-tripeptide-D-alanyl-D-alanine ligase activity
Dsui_0242	COG0769	Catalyzes the addition of meso-diaminopimelic acid to the nucleotide precursor UDP-N-acetylmuramoyl-L-alanyl-D-glutamate (UMAG) in the biosynthesis of bacterial cell-wall peptidoglycan
Dsui_0244	COG3116	cell division
Dsui_0245	COG0275	rRNA processing
Dsui_0246	COG2001	Belongs to the MraZ family
Dsui_0251	COG0313	Catalyzes the 2'-O-methylation of the ribose of cytidine 1402 (C1402) in 16S rRNA
Dsui_0252	COG0792	nuclease activity
Dsui_0254	COG0162	Catalyzes the attachment of tyrosine to tRNA(Tyr) in a two-step reaction tyrosine is first activated by ATP to form Tyr- AMP and then transferred to the acceptor end of tRNA(Tyr)
Dsui_0257	COG1469	GTP cyclohydrolase I activity
Dsui_0258	COG1118	Part of the ABC transporter complex CysAWTP involved in sulfate thiosulfate import. Responsible for energy coupling to the transport system
Dsui_0259	COG4208	sulfate ABC transporter
Dsui_0261	COG1613	Sulfate ABC transporter periplasmic sulfate-binding protein
Dsui_0263	COG1858	cytochrome C peroxidase
Dsui_0265	COG0642	Histidine kinase
Dsui_0267	COG0845	Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family
Dsui_0268	COG1129	ABC transporter
Dsui_0268	COG0842	Transport permease protein
Dsui_0269	COG0842	Transport permease protein
Dsui_0271	COG0745	RESPONSE REGULATOR receiver
Dsui_0272	COG2205	protein histidine kinase activity
Dsui_0277	COG2156	Part of the high-affinity ATP-driven potassium transport (or Kdp) system, which catalyzes the hydrolysis of ATP coupled with the electrogenic transport of potassium into the cytoplasm. This subunit acts as a catalytic chaperone that increases the ATP- binding affinity of the ATP-hydrolyzing subunit KdpB by the formation of a transient KdpB KdpC ATP ternary complex
Dsui_0278	COG2216	Part of the high-affinity ATP-driven potassium transport (or Kdp) system, which catalyzes the hydrolysis of ATP coupled with the electrogenic transport of potassium into the cytoplasm. This subunit is responsible for energy coupling to the transport system
Dsui_0279	COG2060	Part of the high-affinity ATP-driven potassium transport (or Kdp) system, which catalyzes the hydrolysis of ATP coupled with the electrogenic transport of potassium into the cytoplasm. This subunit binds and transports the potassium across the cytoplasmic membrane
Dsui_0282	COG1671	Belongs to the UPF0178 family
Dsui_0283	COG0459	protein refolding
Dsui_0284	COG0234	Binds to Cpn60 in the presence of Mg-ATP and suppresses the ATPase activity of the latter
Dsui_0285	COG0024	Methionine aminopeptidase
Dsui_0289	COG3162	membrane
Dsui_0290	COG4147	Belongs to the sodium solute symporter (SSF) (TC 2.A.21) family
Dsui_0294	COG2027	D-alanyl-D-alanine carboxypeptidase
Dsui_0297	COG1489	DNA binding
Dsui_0298	COG0664	- Catabolite gene activator and regulatory subunit of cAMP-dependent protein
Dsui_0302	COG0043	3-octaprenyl-4-hydroxybenzoate carboxy-lyase activity
Dsui_0303	COG0382	Catalyzes the prenylation of para-hydroxybenzoate (PHB) with an all-trans polyprenyl group. Mediates the second step in the final reaction sequence of ubiquinone-8 (UQ-8) biosynthesis, which is the condensation of the polyisoprenoid side chain with PHB, generating the first membrane-bound Q intermediate 3- octaprenyl-4-hydroxybenzoate
Dsui_0308	COG0477	Major facilitator Superfamily
Dsui_0309	COG0513	Belongs to the DEAD box helicase family
Dsui_0310	COG1607	acyl-coa hydrolase
Dsui_0311	COG1200	Critical role in recombination and DNA repair. Helps process Holliday junction intermediates to mature products by catalyzing branch migration. Has a DNA unwinding activity characteristic of a DNA helicase with a 3'- to 5'- polarity. Unwinds branched duplex DNA (Y-DNA)
Dsui_0317	COG0183	Belongs to the thiolase family
Dsui_0318	COG1024	Enoyl-CoA hydratase
Dsui_0318	COG1250	3-hydroxyacyl-CoA dehydrogenase
Dsui_0319	COG0318	PFAM AMP-dependent synthetase and ligase
Dsui_0321	COG2067	long-chain fatty acid transport protein
Dsui_0322	COG1607	acyl-coa hydrolase
Dsui_0324	COG1307	EDD domain protein, DegV family
Dsui_0325	COG0183	Belongs to the thiolase family
Dsui_0326	COG1960	acyl-CoA dehydrogenase activity
Dsui_0327	COG1309	transcriptional regulator
Dsui_0328	COG5265	(ABC) transporter
Dsui_0329	COG2202	Pas domain
Dsui_0329	COG2205	protein histidine kinase activity
Dsui_0332	COG0203	ribosomal protein L17
Dsui_0333	COG0202	RNA polymerase activity
Dsui_0334	COG0522	One of the primary rRNA binding proteins, it binds directly to 16S rRNA where it nucleates assembly of the body of the 30S subunit
Dsui_0335	COG0100	Located on the platform of the 30S subunit, it bridges several disparate RNA helices of the 16S rRNA. Forms part of the Shine-Dalgarno cleft in the 70S ribosome
Dsui_0336	COG0099	Located at the top of the head of the 30S subunit, it contacts several helices of the 16S rRNA. In the 70S ribosome it contacts the 23S rRNA (bridge B1a) and protein L5 of the 50S subunit (bridge B1b), connecting the 2 subunits
Dsui_0337	COG0257	Belongs to the bacterial ribosomal protein bL36 family
Dsui_0338	COG0361	One of the essential components for the initiation of protein synthesis. Stabilizes the binding of IF-2 and IF-3 on the 30S subunit to which N-formylmethionyl-tRNA(fMet) subsequently binds. Helps modulate mRNA selection, yielding the 30S pre- initiation complex (PIC). Upon addition of the 50S ribosomal subunit IF-1, IF-2 and IF-3 are released leaving the mature 70S translation initation complex
Dsui_0339	COG0201	protein transport
Dsui_0340	COG0200	Binds to the 23S rRNA
Dsui_0341	COG1841	ribosomal large subunit assembly
Dsui_0342	COG0098	Located at the back of the 30S subunit body where it stabilizes the conformation of the head with respect to the body
Dsui_0343	COG0256	This is one of the proteins that binds and probably mediates the attachment of the 5S RNA into the large ribosomal subunit, where it forms part of the central protuberance
Dsui_0344	COG0097	This protein binds to the 23S rRNA, and is important in its secondary structure. It is located near the subunit interface in the base of the L7 L12 stalk, and near the tRNA binding site of the peptidyltransferase center
Dsui_0345	COG0096	One of the primary rRNA binding proteins, it binds directly to 16S rRNA central domain where it helps coordinate assembly of the platform of the 30S subunit
Dsui_0346	COG0199	Binds 16S rRNA, required for the assembly of 30S particles and may also be responsible for determining the conformation of the 16S rRNA at the A site
Dsui_0347	COG0094	This is 1 of the proteins that binds and probably mediates the attachment of the 5S RNA into the large ribosomal subunit, where it forms part of the central protuberance. In the 70S ribosome it contacts protein S13 of the 30S subunit (bridge B1b), connecting the 2 subunits
Dsui_0348	COG0198	One of the proteins that surrounds the polypeptide exit tunnel on the outside of the subunit
Dsui_0350	COG0186	One of the primary rRNA binding proteins, it binds specifically to the 5'-end of 16S ribosomal RNA
Dsui_0351	COG0255	Belongs to the universal ribosomal protein uL29 family
Dsui_0352	COG0197	Binds 23S rRNA and is also seen to make contacts with the A and possibly P site tRNAs
Dsui_0353	COG0092	Binds the lower part of the 30S subunit head. Binds mRNA in the 70S ribosome, positioning it for translation
Dsui_0354	COG0091	The globular domain of the protein is located near the polypeptide exit tunnel on the outside of the subunit, while an extended beta-hairpin is found that lines the wall of the exit tunnel in the center of the 70S ribosome
Dsui_0355	COG0185	Protein S19 forms a complex with S13 that binds strongly to the 16S ribosomal RNA
Dsui_0356	COG0090	One of the primary rRNA binding proteins. Required for association of the 30S and 50S subunits to form the 70S ribosome, for tRNA binding and peptide bond formation. It has been suggested to have peptidyltransferase activity
Dsui_0357	COG0089	rRNA binding
Dsui_0358	COG0088	Forms part of the polypeptide exit tunnel
Dsui_0359	COG0087	One of the primary rRNA binding proteins, it binds directly near the 3'-end of the 23S rRNA, where it nucleates assembly of the 50S subunit
Dsui_0360	COG0051	transcription antitermination factor activity, RNA binding
Dsui_0361	COG0050	This protein promotes the GTP-dependent binding of aminoacyl-tRNA to the A-site of ribosomes during protein biosynthesis
Dsui_0362	COG0480	Catalyzes the GTP-dependent ribosomal translocation step during translation elongation. During this step, the ribosome changes from the pre-translocational (PRE) to the post- translocational (POST) state as the newly formed A-site-bound peptidyl-tRNA and P-site-bound deacylated tRNA move to the P and E sites, respectively. Catalyzes the coordinated movement of the two tRNA molecules, the mRNA and conformational changes in the ribosome
Dsui_0363	COG0049	tRNA binding
Dsui_0364	COG0048	Interacts with and stabilizes bases of the 16S rRNA that are involved in tRNA selection in the A site and with the mRNA backbone. Located at the interface of the 30S and 50S subunits, it traverses the body of the 30S subunit contacting proteins on the other side and probably holding the rRNA structure together. The combined cluster of proteins S8, S12 and S17 appears to hold together the shoulder and platform of the 30S subunit
Dsui_0365	COG0086	DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates
Dsui_0366	COG0085	RNA polymerase activity
Dsui_0367	COG0222	ribosome binding
Dsui_0368	COG0244	Forms part of the ribosomal stalk, playing a central role in the interaction of the ribosome with GTP-bound translation factors
Dsui_0369	COG0081	regulation of translation
Dsui_0370	COG0080	Forms part of the ribosomal stalk which helps the ribosome interact with GTP-bound translation factors
Dsui_0372	COG0690	P-P-bond-hydrolysis-driven protein transmembrane transporter activity
Dsui_0374	COG0050	This protein promotes the GTP-dependent binding of aminoacyl-tRNA to the A-site of ribosomes during protein biosynthesis
Dsui_0378	COG0277	FAD linked oxidase domain protein
Dsui_0384	COG0773	UDP-N-acetylmuramate-L-alanine ligase activity
Dsui_0386	COG0526	COG0526, thiol-disulfide isomerase and thioredoxins
Dsui_0387	COG0757	Catalyzes a trans-dehydration via an enolate intermediate
Dsui_0388	COG0511	ligase activity, forming carbon-carbon bonds
Dsui_0389	COG0439	Biotin carboxylase
Dsui_0390	COG2264	protein methyltransferase activity
Dsui_0398	COG1087	Belongs to the NAD(P)-dependent epimerase dehydratase family
Dsui_0399	COG0639	Hydrolyzes diadenosine 5',5'''-P1,P4-tetraphosphate to yield ADP
Dsui_0403	COG0859	PFAM glycosyl transferase family 9
Dsui_0407	COG2518	Catalyzes the methyl esterification of L-isoaspartyl residues in peptides and proteins that result from spontaneous decomposition of normal L-aspartyl and L-asparaginyl residues. It plays a role in the repair and or degradation of damaged proteins
Dsui_0408	COG0841	Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family
Dsui_0409	COG0845	Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family
Dsui_0413	COG1173	ABC-type dipeptide oligopeptide nickel transport systems, permease components
Dsui_0414	COG4608	Belongs to the ABC transporter superfamily
Dsui_0418	COG0385	Bile acid
Dsui_0421	COG3338	carbonate dehydratase activity
Dsui_0422	COG0422	Catalyzes the synthesis of the hydroxymethylpyrimidine phosphate (HMP-P) moiety of thiamine from aminoimidazole ribotide (AIR) in a radical S-adenosyl-L-methionine (SAM)-dependent reaction
Dsui_0423	COG0628	permease
Dsui_0424	COG3957	D-xylulose 5-phosphate D-fructose 6-phosphate phosphoketolase
Dsui_0426	COG0583	DNA-binding transcription factor activity
Dsui_0427	COG1902	pentaerythritol trinitrate reductase activity
Dsui_0428	COG0840	transmembrane signaling receptor activity
Dsui_0434	COG1530	ribonuclease E activity
Dsui_0436	COG0412	Dienelactone hydrolase
Dsui_0437	COG1012	belongs to the aldehyde dehydrogenase family
Dsui_0438	COG0791	NLP P60 protein
Dsui_0441	COG2239	Acts as a magnesium transporter
Dsui_0442	COG0744	Peptidoglycan polymerase that catalyzes glycan chain elongation from lipid-linked precursors
Dsui_0443	COG0169	Involved in the biosynthesis of the chorismate, which leads to the biosynthesis of aromatic amino acids. Catalyzes the reversible NADPH linked reduction of 3-dehydroshikimate (DHSA) to yield shikimate (SA)
Dsui_0445	COG0810	Interacts with outer membrane receptor proteins that carry out high-affinity binding and energy dependent uptake into the periplasmic space of specific substrates. It could act to transduce energy from the cytoplasmic membrane to specific energy- requiring processes in the outer membrane, resulting in the release into the periplasm of ligands bound by these outer membrane proteins
Dsui_0446	COG4776	Involved in mRNA degradation. Hydrolyzes single-stranded polyribonucleotides processively in the 3' to 5' direction
Dsui_0447	COG3150	esterase
Dsui_0449	COG1968	undecaprenyl-diphosphatase activity
Dsui_0450	COG0424	maF-like protein
Dsui_0451	COG1576	Specifically methylates the pseudouridine at position 1915 (m3Psi1915) in 23S rRNA
Dsui_0452	COG0799	negative regulation of ribosome biogenesis
Dsui_0453	COG1057	Catalyzes the reversible adenylation of nicotinate mononucleotide (NaMN) to nicotinic acid adenine dinucleotide (NaAD)
Dsui_0456	COG2334	A protein kinase that phosphorylates Ser and Thr residues. Probably acts to suppress the effects of stress linked to accumulation of reactive oxygen species. Probably involved in the extracytoplasmic stress response
Dsui_0459	COG0749	In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity
Dsui_0459	COG0258	In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity
Dsui_0466	COG0438	transferase activity, transferring glycosyl groups
Dsui_0467	COG1132	(ABC) transporter
Dsui_0468	COG0438	transferase activity, transferring glycosyl groups
Dsui_0469	COG0859	PFAM glycosyl transferase family 9
Dsui_0471	COG0368	Joins adenosylcobinamide-GDP and alpha-ribazole to generate adenosylcobalamin (Ado-cobalamin). Also synthesizes adenosylcobalamin 5'-phosphate from adenosylcobinamide-GDP and alpha-ribazole 5'-phosphate
Dsui_0472	COG2038	nicotinate-nucleotide-dimethylbenzimidazole phosphoribosyltransferase activity
Dsui_0476	COG0602	queuosine metabolic process
Dsui_0479	COG0823	Involved in the tonB-independent uptake of proteins
Dsui_0483	COG0824	Thioesterase
Dsui_0484	COG2255	four-way junction helicase activity
Dsui_0485	COG0632	four-way junction helicase activity
Dsui_0486	COG0817	Nuclease that resolves Holliday junction intermediates in genetic recombination. Cleaves the cruciform structure in supercoiled DNA by nicking to strands with the same polarity at sites symmetrically opposed at the junction in the homologous arms and leaves a 5'-terminal phosphate and a 3'-terminal hydroxyl group
Dsui_0489	COG0217	transcriptional regulatory protein
Dsui_0490	COG0433	COG0433 Predicted ATPase
Dsui_0491	COG0635	Involved in the biosynthesis of porphyrin-containing compound
Dsui_0492	COG0127	Pyrophosphatase that catalyzes the hydrolysis of nucleoside triphosphates to their monophosphate derivatives, with a high preference for the non-canonical purine nucleotides XTP (xanthosine triphosphate), dITP (deoxyinosine triphosphate) and ITP. Seems to function as a house-cleaning enzyme that removes non-canonical purine nucleotides from the nucleotide pool, thus preventing their incorporation into DNA RNA and avoiding chromosomal lesions
Dsui_0494	COG0689	Phosphorolytic exoribonuclease that removes nucleotide residues following the -CCA terminus of tRNA and adds nucleotides to the ends of RNA molecules by using nucleoside diphosphates as substrates
Dsui_0496	COG0515	serine threonine protein kinase
Dsui_0496	COG2815	serine threonine protein kinase
Dsui_0497	COG1561	YicC-like family, N-terminal region
Dsui_0498	COG0194	GDP metabolic process
Dsui_0499	COG1758	RNA polymerase activity
Dsui_0500	COG0317	In eubacteria ppGpp (guanosine 3'-diphosphate 5-' diphosphate) is a mediator of the stringent response that coordinates a variety of cellular activities in response to changes in nutritional abundance
Dsui_0501	COG0665	tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase activity
Dsui_0502	COG1024	Enoyl-CoA hydratase
Dsui_0503	COG0084	hydrolase, TatD family'
Dsui_0504	COG3781	membrane
Dsui_0505	COG0780	Catalyzes the NADPH-dependent reduction of 7-cyano-7- deazaguanine (preQ0) to 7-aminomethyl-7-deazaguanine (preQ1)
Dsui_0505	COG2904	Catalyzes the NADPH-dependent reduction of 7-cyano-7- deazaguanine (preQ0) to 7-aminomethyl-7-deazaguanine (preQ1)
Dsui_0508	COG0243	molybdopterin cofactor binding
Dsui_0509	COG0437	4 iron, 4 sulfur cluster binding
Dsui_0510	COG0348	domain, Protein
Dsui_0516	COG0439	Biotin carboxylase
Dsui_0517	COG4799	Acetyl-CoA carboxylase, carboxyltransferase component subunits alpha and beta
Dsui_0518	COG1703	isobutyryl-CoA mutase activity
Dsui_0519	COG1884	Catalyzes the reversible interconversion of isobutyryl- CoA and n-butyryl-CoA, using radical chemistry. Also exhibits GTPase activity, associated with its G-protein domain (MeaI) that functions as a chaperone that assists cofactor delivery and proper holo-enzyme assembly
Dsui_0519	COG2185	Catalyzes the reversible interconversion of isobutyryl- CoA and n-butyryl-CoA, using radical chemistry. Also exhibits GTPase activity, associated with its G-protein domain (MeaI) that functions as a chaperone that assists cofactor delivery and proper holo-enzyme assembly
Dsui_0520	COG1802	Transcriptional regulator
Dsui_0521	COG1024	Enoyl-CoA hydratase
Dsui_0522	COG4147	Belongs to the sodium solute symporter (SSF) (TC 2.A.21) family
Dsui_0523	COG3162	membrane
Dsui_0524	COG0730	response to heat
Dsui_0529	COG4206	TonB-dependent receptor
Dsui_0530	COG0609	Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily
Dsui_0531	COG4559	Part of the ABC transporter complex HmuTUV involved in hemin import. Responsible for energy coupling to the transport system
Dsui_0533	COG1797	cobyrinic acid a,c-diamide synthase activity
Dsui_0539	COG0614	abc-type fe3 -hydroxamate transport system, periplasmic component
Dsui_0541	COG1270	Converts cobyric acid to cobinamide by the addition of aminopropanol on the F carboxylic group
Dsui_0542	COG1492	cobalamin metabolic process
Dsui_0548	COG2391	methyltransferase activity
Dsui_0549	COG0603	Catalyzes the ATP-dependent conversion of 7-carboxy-7- deazaguanine (CDG) to 7-cyano-7-deazaguanine (preQ(0))
Dsui_0550	COG2710	Component of the dark-operative protochlorophyllide reductase (DPOR) that uses Mg-ATP and reduced ferredoxin to reduce ring D of protochlorophyllide (Pchlide) to form chlorophyllide a (Chlide). This reaction is light-independent. The NB-protein
Dsui_0551	COG2710	Component of the dark-operative protochlorophyllide reductase (DPOR) that uses Mg-ATP and reduced ferredoxin to reduce ring D of protochlorophyllide (Pchlide) to form chlorophyllide a (Chlide). This reaction is light-independent. The NB-protein
Dsui_0554	COG5420	small protein containing a coiled-coil domain
Dsui_0559	COG2824	Alkylphosphonate utilization operon protein PhnA
Dsui_0568	COG3447	MASE1 domain protein
Dsui_0568	COG5001	Diguanylate cyclase
Dsui_0568	COG5002	protein histidine kinase activity
Dsui_0571	COG3411	Ferredoxin
Dsui_0580	COG1220	this subunit has chaperone activity. The binding of ATP and its subsequent hydrolysis by HslU are essential for unfolding of protein substrates subsequently hydrolyzed by HslV. HslU recognizes the N-terminal part of its protein substrates and unfolds these before they are guided to HslV for hydrolysis
Dsui_0581	COG5405	Protease subunit of a proteasome-like degradation complex believed to be a general protein degrading machinery
Dsui_0584	COG1121	(ABC) transporter
Dsui_0585	COG0803	Belongs to the bacterial solute-binding protein 9 family
Dsui_0588	COG0523	cobalamin synthesis protein
Dsui_0589	COG0523	cobalamin synthesis protein
Dsui_0591	COG0415	Belongs to the DNA photolyase family
Dsui_0593	COG1678	Uncharacterized ACR, COG1678
Dsui_0594	COG0816	Could be a nuclease involved in processing of the 5'-end of pre-16S rRNA
Dsui_0595	COG2065	Also displays a weak uracil phosphoribosyltransferase activity which is not physiologically significant
Dsui_0596	COG0540	Belongs to the ATCase OTCase family
Dsui_0599	COG3279	Response regulator of the LytR AlgR family
Dsui_0600	COG1872	DUF167
Dsui_0601	COG0762	integral membrane protein
Dsui_0610	COG3434	signal transduction protein containing EAL and modified HD-GYP domains
Dsui_0611	COG1455	protein-N(PI)-phosphohistidine-lactose phosphotransferase system transporter activity
Dsui_0616	COG0577	efflux transmembrane transporter activity
Dsui_0616	COG1136	(ABC) transporter
Dsui_0621	COG1595	DNA-templated transcription, initiation
Dsui_0625	COG2151	metal-sulfur cluster biosynthetic enzyme
Dsui_0627	COG0411	ABC transporter
Dsui_0631	COG4654	Cytochrome c, class I
Dsui_0632	COG1331	Highly conserved protein containing a thioredoxin domain
Dsui_0633	COG0583	DNA-binding transcription factor activity
Dsui_0634	COG0697	spore germination
Dsui_0636	COG0765	amino acid transport
Dsui_0637	COG0765	amino acid transport
Dsui_0638	COG1126	abc transporter atp-binding protein
Dsui_0640	COG0685	methylenetetrahydrofolate reductase (NAD(P)H) activity
Dsui_0642	COG0499	May play a key role in the regulation of the intracellular concentration of adenosylhomocysteine
Dsui_0644	COG0318	PFAM AMP-dependent synthetase and ligase
Dsui_0645	COG0192	Catalyzes the formation of S-adenosylmethionine (AdoMet) from methionine and ATP. The overall synthetic reaction is composed of two sequential steps, AdoMet formation and the subsequent tripolyphosphate hydrolysis which occurs prior to release of AdoMet from the enzyme
Dsui_0647	COG1560	Kdo2-lipid A biosynthetic process
Dsui_0649	COG0253	Catalyzes the stereoinversion of LL-2,6- diaminoheptanedioate (L,L-DAP) to meso-diaminoheptanedioate (meso- DAP), a precursor of L-lysine and an essential component of the bacterial peptidoglycan
Dsui_0651	COG4973	Belongs to the 'phage' integrase family. XerC subfamily
Dsui_0655	COG3647	Membrane
Dsui_0656	COG0643	Histidine kinase
Dsui_0656	COG2198	Histidine kinase
Dsui_0662	COG0351	phosphomethylpyrimidine kinase
Dsui_0663	COG0352	thiamine-phosphate diphosphorylase activity
Dsui_0664	COG0001	glutamate-1-semialdehyde 2,1-aminomutase activity
Dsui_0665	COG2326	polyphosphate kinase activity
Dsui_0672	COG0661	Is probably a protein kinase regulator of UbiI activity which is involved in aerobic coenzyme Q (ubiquinone) biosynthesis
Dsui_0673	COG0018	arginyl-trna synthetase
Dsui_0675	COG1651	Required for disulfide bond formation in some periplasmic proteins. Acts by transferring its disulfide bond to other proteins and is reduced in the process
Dsui_0679	COG1999	signal sequence binding
Dsui_0680	COG1028	Short-chain dehydrogenase reductase Sdr
Dsui_0681	COG0614	abc-type fe3 -hydroxamate transport system, periplasmic component
Dsui_0682	COG0212	Belongs to the 5-formyltetrahydrofolate cyclo-ligase family
Dsui_0683	COG0741	lytic transglycosylase activity
Dsui_0686	COG0617	tRNA 3'-terminal CCA addition
Dsui_0688	COG0625	glutathione transferase activity
Dsui_0695	COG0037	tRNA processing
Dsui_0696	COG2114	Pfam Adenylate and Guanylate cyclase catalytic domain
Dsui_0697	COG2815	serine threonine protein kinase
Dsui_0697	COG0515	serine threonine protein kinase
Dsui_0701	COG1493	Catalyzes the ATP- as well as the pyrophosphate- dependent phosphorylation of a specific serine residue in HPr, a phosphocarrier protein of the phosphoenolpyruvate-dependent sugar phosphotransferase system (PTS). HprK P also catalyzes the pyrophosphate-producing, inorganic phosphate-dependent dephosphorylation (phosphorolysis) of seryl-phosphorylated HPr (P- Ser-HPr). The two antagonistic activities of HprK P are regulated by several intracellular metabolites, which change their concentration in response to the absence or presence of rapidly metabolisable carbon sources (glucose, fructose, etc.) in the growth medium. Therefore, by controlling the phosphorylation state of HPr, HPrK P is a sensor enzyme that plays a major role in the regulation of carbon metabolism and sugar transport it mediates carbon catabolite repression (CCR), and regulates PTS-catalyzed carbohydrate uptake and inducer exclusion
Dsui_0703	COG1544	Required for dimerization of active 70S ribosomes into 100S ribosomes in stationary phase
Dsui_0704	COG1508	bacterial-type RNA polymerase transcriptional activator activity, sequence-specific DNA binding
Dsui_0705	COG1137	ATPase activity
Dsui_0706	COG2137	regulation of response to DNA damage stimulus
Dsui_0707	COG0468	Can catalyze the hydrolysis of ATP in the presence of single-stranded DNA, the ATP-dependent uptake of single-stranded DNA by duplex DNA, and the ATP-dependent hybridization of homologous single-stranded DNAs. It interacts with LexA causing its activation and leading to its autocatalytic cleavage
Dsui_0709	COG2193	ferroxidase activity
Dsui_0710	COG1546	Belongs to the CinA family
Dsui_0711	COG1267	Lipid phosphatase which dephosphorylates phosphatidylglycerophosphate (PGP) to phosphatidylglycerol (PG)
Dsui_0713	COG0781	Involved in transcription antitermination. Required for transcription of ribosomal RNA (rRNA) genes. Binds specifically to the boxA antiterminator sequence of the ribosomal RNA (rrn) operons
Dsui_0714	COG0054	6,7-dimethyl-8-ribityllumazine synthase activity
Dsui_0717	COG0807	Catalyzes the conversion of D-ribulose 5-phosphate to formate and 3,4-dihydroxy-2-butanone 4-phosphate
Dsui_0718	COG4232	protein-disulfide reductase activity
Dsui_0724	COG1131	(ABC) transporter
Dsui_0726	COG3411	Ferredoxin
Dsui_0728	COG1171	Catalyzes the anaerobic formation of alpha-ketobutyrate and ammonia from threonine in a two-step reaction. The first step involved a dehydration of threonine and a production of enamine intermediates (aminocrotonate), which tautomerizes to its imine form (iminobutyrate). Both intermediates are unstable and short- lived. The second step is the nonenzymatic hydrolysis of the enamine imine intermediates to form 2-ketobutyrate and free ammonia. In the low water environment of the cell, the second step is accelerated by RidA
Dsui_0735	COG1238	metal cluster binding
Dsui_0738	COG0432	Pfam Uncharacterised protein family UPF0047
Dsui_0739	COG2223	nitrite transmembrane transporter activity
Dsui_0740	COG2021	Transfers an acetyl group from acetyl-CoA to L- homoserine, forming acetyl-L-homoserine
Dsui_0740	COG2813	Specifically methylates the guanine in position
Dsui_0741	COG2021	Transfers an acetyl group from acetyl-CoA to L- homoserine, forming acetyl-L-homoserine
Dsui_0742	COG1080	General (non sugar-specific) component of the phosphoenolpyruvate-dependent sugar phosphotransferase system (sugar PTS). This major carbohydrate active-transport system catalyzes the phosphorylation of incoming sugar substrates concomitantly with their translocation across the cell membrane. Enzyme I transfers the phosphoryl group from phosphoenolpyruvate (PEP) to the phosphoryl carrier protein (HPr)
Dsui_0743	COG1925	phosphoenolpyruvate-dependent sugar phosphotransferase system
Dsui_0746	COG0189	ligase activity
Dsui_0753	COG0488	(ABC) transporter
Dsui_0758	COG0488	(ABC) transporter
Dsui_0760	COG5002	protein histidine kinase activity
Dsui_0760	COG5001	Diguanylate cyclase
Dsui_0763	COG0004	ammonium transporteR
Dsui_0766	COG2960	long-chain fatty acid transporting porin activity
Dsui_0768	COG1525	nuclease
Dsui_0775	COG2814	Major facilitator Superfamily
Dsui_0778	COG2913	Part of the outer membrane protein assembly complex, which is involved in assembly and insertion of beta-barrel proteins into the outer membrane
Dsui_0780	COG1028	Short-chain dehydrogenase reductase Sdr
Dsui_0782	COG0002	Catalyzes the NADPH-dependent reduction of N-acetyl-5- glutamyl phosphate to yield N-acetyl-L-glutamate 5-semialdehyde
Dsui_0784	COG3876	Protein conserved in bacteria
Dsui_0789	COG2203	Gaf domain
Dsui_0789	COG3706	GGDEF domain
Dsui_0789	COG4251	negative regulation of phosphorylation
Dsui_0789	COG5001	Diguanylate cyclase
Dsui_0790	COG0812	UDP-N-acetylmuramate dehydrogenase activity
Dsui_0798	COG0288	reversible hydration of carbon dioxide
Dsui_0801	COG1940	carbohydrate kinase activity
Dsui_0802	COG2258	MOSC domain
Dsui_0805	COG1198	Involved in the restart of stalled replication forks. Recognizes and binds the arrested nascent DNA chain at stalled replication forks. It can open the DNA duplex, via its helicase activity, and promote assembly of the primosome and loading of the major replicative helicase DnaB onto DNA
Dsui_0806	COG0407	Catalyzes the decarboxylation of four acetate groups of uroporphyrinogen-III to yield coproporphyrinogen-III
Dsui_0808	COG0569	domain protein
Dsui_0809	COG2204	response regulator
Dsui_0812	COG0781	Involved in transcription antitermination. Required for transcription of ribosomal RNA (rRNA) genes. Binds specifically to the boxA antiterminator sequence of the ribosomal RNA (rrn) operons
Dsui_0812	COG0144	Specifically methylates the cytosine at position 967 (m5C967) of 16S rRNA
Dsui_0813	COG0053	Belongs to the cation diffusion facilitator (CDF) transporter (TC 2.A.4) family
Dsui_0815	COG0501	Belongs to the peptidase M48B family
Dsui_0816	COG0223	Attaches a formyl group to the free amino group of methionyl-tRNA(fMet). The formyl group appears to play a dual role in the initiator identity of N-formylmethionyl-tRNA by promoting its recognition by IF2 and preventing the misappropriation of this tRNA by the elongation apparatus
Dsui_0817	COG0242	peptide deformylase activity
Dsui_0819	COG0758	DNA mediated transformation
Dsui_0820	COG2922	Belongs to the Smg family
Dsui_0822	COG0783	Belongs to the Dps family
Dsui_0823	COG0583	DNA-binding transcription factor activity
Dsui_0824	COG1187	pseudouridine synthase activity
Dsui_0827	COG1835	transferase activity, transferring acyl groups other than amino-acyl groups
Dsui_0827	COG2755	lipolytic protein G-D-S-L family
Dsui_0831	COG0593	it binds specifically double-stranded DNA at a 9 bp consensus (dnaA box) 5'-TTATC CA A CA A-3'. DnaA binds to ATP and to acidic phospholipids
Dsui_0833	COG0230	Belongs to the bacterial ribosomal protein bL34 family
Dsui_0834	COG0594	ribonuclease P activity
Dsui_0835	COG0759	Could be involved in insertion of integral membrane proteins into the membrane
Dsui_0836	COG0706	membrane insertase activity
Dsui_0837	COG0486	Exhibits a very high intrinsic GTPase hydrolysis rate. Involved in the addition of a carboxymethylaminomethyl (cmnm) group at the wobble position (U34) of certain tRNAs, forming tRNA- cmnm(5)s(2)U34
Dsui_0842	COG0411	ABC transporter
Dsui_0846	COG0445	tRNA wobble uridine modification
Dsui_0847	COG0357	Ribosomal RNA small subunit methyltransferase G
Dsui_0848	COG1192	Involved in chromosome partitioning
Dsui_0849	COG1475	DNA binding
Dsui_0851	COG0356	it plays a direct role in the translocation of protons across the membrane
Dsui_0853	COG0711	Component of the F(0) channel, it forms part of the peripheral stalk, linking F(1) to F(0)
Dsui_0854	COG0712	F(1)F(0) ATP synthase produces ATP from ADP in the presence of a proton or sodium gradient. F-type ATPases consist of two structural domains, F(1) containing the extramembraneous catalytic core and F(0) containing the membrane proton channel, linked together by a central stalk and a peripheral stalk. During catalysis, ATP synthesis in the catalytic domain of F(1) is coupled via a rotary mechanism of the central stalk subunits to proton translocation
Dsui_0855	COG0056	Produces ATP from ADP in the presence of a proton gradient across the membrane. The alpha chain is a regulatory subunit
Dsui_0856	COG0224	Produces ATP from ADP in the presence of a proton gradient across the membrane. The gamma chain is believed to be important in regulating ATPase activity and the flow of protons through the CF(0) complex
Dsui_0857	COG0055	Produces ATP from ADP in the presence of a proton gradient across the membrane. The catalytic sites are hosted primarily by the beta subunits
Dsui_0858	COG0355	proton-transporting ATP synthase activity, rotational mechanism
Dsui_0863	COG0745	RESPONSE REGULATOR receiver
Dsui_0872	COG0708	Exodeoxyribonuclease III
Dsui_0873	COG0461	Catalyzes the transfer of a ribosyl phosphate group from 5-phosphoribose 1-diphosphate to orotate, leading to the formation of orotidine monophosphate (OMP)
Dsui_0877	COG0348	domain, Protein
Dsui_0883	COG1167	Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain MocR family and their eukaryotic orthologs
Dsui_0884	COG0064	Allows the formation of correctly charged Asn-tRNA(Asn) or Gln-tRNA(Gln) through the transamidation of misacylated Asp- tRNA(Asn) or Glu-tRNA(Gln) in organisms which lack either or both of asparaginyl-tRNA or glutaminyl-tRNA synthetases. The reaction takes place in the presence of glutamine and ATP through an activated phospho-Asp-tRNA(Asn) or phospho-Glu-tRNA(Gln)
Dsui_0886	COG0154	amidase activity
Dsui_0887	COG0721	Allows the formation of correctly charged Asn-tRNA(Asn) or Gln-tRNA(Gln) through the transamidation of misacylated Asp- tRNA(Asn) or Glu-tRNA(Gln) in organisms which lack either or both of asparaginyl-tRNA or glutaminyl-tRNA synthetases. The reaction takes place in the presence of glutamine and ATP through an activated phospho-Asp-tRNA(Asn) or phospho-Glu-tRNA(Gln)
Dsui_0888	COG1077	Cell shape determining protein MreB Mrl
Dsui_0889	COG1792	Involved in formation and maintenance of cell shape
Dsui_0890	COG2891	Involved in formation of the rod shape of the cell. May also contribute to regulation of formation of penicillin-binding proteins
Dsui_0891	COG0768	penicillin binding
Dsui_0892	COG0772	Belongs to the SEDS family
Dsui_0899	COG1686	Belongs to the peptidase S11 family
Dsui_0900	COG0115	Belongs to the class-IV pyridoxal-phosphate-dependent aminotransferase family
Dsui_0901	COG2921	Belongs to the UPF0250 family
Dsui_0902	COG0321	lipoyl(octanoyl) transferase activity
Dsui_0903	COG0320	Catalyzes the radical-mediated insertion of two sulfur atoms into the C-6 and C-8 positions of the octanoyl moiety bound to the lipoyl domains of lipoate-dependent enzymes, thereby converting the octanoylated domains into lipoylated derivatives
Dsui_0919	COG3437	response regulator, receiver
Dsui_0921	COG5002	protein histidine kinase activity
Dsui_0921	COG2205	protein histidine kinase activity
Dsui_0921	COG0784	Response regulator, receiver
Dsui_0926	COG0114	fumarate hydratase activity
Dsui_0928	COG0348	domain, Protein
Dsui_0930	COG2204	response regulator
Dsui_0933	COG0210	DNA helicase
Dsui_0935	COG3245	cytochrome
Dsui_0939	COG0745	RESPONSE REGULATOR receiver
Dsui_0939	COG3706	GGDEF domain
Dsui_0944	COG1145	4fe-4S ferredoxin, iron-sulfur binding domain protein
Dsui_0946	COG5554	nitrogen fixation
Dsui_0950	COG2030	dehydratase
Dsui_0952	COG3143	Plays an important role in bacterial chemotaxis signal transduction pathway by accelerating the dephosphorylation of phosphorylated CheY (CheY-P)
Dsui_0955	COG1348	The key enzymatic reactions in nitrogen fixation are catalyzed by the nitrogenase complex which has 2 components the iron protein and the molybdenum-iron protein
Dsui_0957	COG2710	Component of the dark-operative protochlorophyllide reductase (DPOR) that uses Mg-ATP and reduced ferredoxin to reduce ring D of protochlorophyllide (Pchlide) to form chlorophyllide a (Chlide). This reaction is light-independent. The NB-protein
Dsui_0965	COG1285	pathogenesis
Dsui_0968	COG1515	deoxyribonuclease V activity
Dsui_0970	COG3706	GGDEF domain
Dsui_0970	COG0745	RESPONSE REGULATOR receiver
Dsui_0971	COG3243	poly(R)-hydroxyalkanoic acid synthase
Dsui_0975	COG1960	acyl-CoA dehydrogenase activity
Dsui_0976	COG0183	Belongs to the thiolase family
Dsui_0977	COG1960	acyl-CoA dehydrogenase activity
Dsui_0980	COG4799	Acetyl-CoA carboxylase, carboxyltransferase component subunits alpha and beta
Dsui_0981	COG1024	Enoyl-CoA hydratase
Dsui_0983	COG5001	Diguanylate cyclase
Dsui_0987	COG0491	Thiolesterase that catalyzes the hydrolysis of S-D- lactoyl-glutathione to form glutathione and D-lactic acid
Dsui_0989	COG1473	amidohydrolase
Dsui_0990	COG1660	Displays ATPase and GTPase activities
Dsui_0996	COG0741	lytic transglycosylase activity
Dsui_0997	COG0840	transmembrane signaling receptor activity
Dsui_0997	COG3290	protein histidine kinase activity
Dsui_0998	COG1194	a g-specific adenine glycosylase
Dsui_0999	COG0714	Associated with various cellular activities
Dsui_1003	COG0027	Involved in the de novo purine biosynthesis. Catalyzes the transfer of formate to 5-phospho-ribosyl-glycinamide (GAR), producing 5-phospho-ribosyl-N-formylglycinamide (FGAR). Formate is provided by PurU via hydrolysis of 10-formyl-tetrahydrofolate
Dsui_1004	COG1853	conserved protein domain typically associated with flavoprotein oxygenases, DIM6 NTAB family
Dsui_1006	COG0583	DNA-binding transcription factor activity
Dsui_1014	COG2022	thiamine diphosphate biosynthetic process
Dsui_1016	COG0220	tRNA (guanine-N7-)-methyltransferase activity
Dsui_1022	COG2177	Part of the ABC transporter FtsEX involved in
Dsui_1023	COG2884	Cell division ATP-binding protein ftsE
Dsui_1025	COG0612	Peptidase, M16
Dsui_1026	COG0612	Peptidase, M16
Dsui_1027	COG0742	ribosomal rna small subunit methyltransferase
Dsui_1028	COG0669	Reversibly transfers an adenylyl group from ATP to 4'- phosphopantetheine, yielding dephospho-CoA (dPCoA) and pyrophosphate
Dsui_1029	COG1145	4fe-4S ferredoxin, iron-sulfur binding domain protein
Dsui_1030	COG0699	ATPase. Has a role at an early stage in the morphogenesis of the spore coat
Dsui_1031	COG0266	class I DNA-(apurinic or apyrimidinic site) endonuclease activity
Dsui_1034	COG1947	Catalyzes the phosphorylation of the position 2 hydroxy group of 4-diphosphocytidyl-2C-methyl-D-erythritol
Dsui_1036	COG0462	Involved in the biosynthesis of the central metabolite phospho-alpha-D-ribosyl-1-pyrophosphate (PRPP) via the transfer of pyrophosphoryl group from ATP to 1-hydroxyl of ribose-5-phosphate (Rib-5-P)
Dsui_1037	COG1825	This is one of the proteins that binds to the 5S RNA in the ribosome where it forms part of the central protuberance
Dsui_1038	COG0193	aminoacyl-tRNA hydrolase activity
Dsui_1039	COG0012	GTP binding
Dsui_1040	COG0008	Catalyzes the attachment of glutamate to tRNA(Glu) in a two-step reaction glutamate is first activated by ATP to form Glu-AMP and then transferred to the acceptor end of tRNA(Glu)
Dsui_1041	COG1502	Catalyzes the reversible phosphatidyl group transfer from one phosphatidylglycerol molecule to another to form cardiolipin (CL) (diphosphatidylglycerol) and glycerol
Dsui_1042	COG3568	Endonuclease Exonuclease Phosphatase
Dsui_1043	COG0379	Catalyzes the condensation of iminoaspartate with dihydroxyacetone phosphate to form quinolinate
Dsui_1050	COG3852	Histidine kinase
Dsui_1051	COG2204	response regulator
Dsui_1052	COG0340	biotin-[acetyl-CoA-carboxylase] ligase activity
Dsui_1052	COG1654	Acts both as a biotin-- acetyl-CoA-carboxylase ligase and a biotin-operon repressor. In the presence of ATP, BirA activates biotin to form the BirA-biotinyl-5'-adenylate (BirA-bio- 5'-AMP or holoBirA) complex. HoloBirA can either transfer the biotinyl moiety to the biotin carboxyl carrier protein (BCCP) subunit of acetyl-CoA carboxylase, or bind to the biotin operator site and inhibit transcription of the operon
Dsui_1053	COG1521	Catalyzes the phosphorylation of pantothenate (Pan), the first step in CoA biosynthesis
Dsui_1054	COG1350	The beta subunit is responsible for the synthesis of L- tryptophan from indole and L-serine
Dsui_1056	COG0237	dephospho-CoA kinase activity
Dsui_1057	COG4582	Cell division factor that enhances FtsZ-ring assembly. Directly interacts with FtsZ and promotes bundling of FtsZ protofilaments, with a reduction in FtsZ GTPase activity
Dsui_1058	COG3024	Inhibits all the catalytic activities of DNA gyrase by preventing its interaction with DNA. Acts by binding directly to the C-terminal domain of GyrB, which probably disrupts DNA binding by the gyrase
Dsui_1059	COG0494	nUDIX hydrolase
Dsui_1061	COG2821	murein-degrading enzyme. may play a role in recycling of muropeptides during cell elongation and or cell division
Dsui_1062	COG0004	ammonium transporteR
Dsui_1065	COG2217	Heavy metal translocating P-type atpase
Dsui_1067	COG2205	protein histidine kinase activity
Dsui_1073	COG0845	Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family
Dsui_1074	COG3696	Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family
Dsui_1080	COG1815	bacterial-type flagellum-dependent cell motility
Dsui_1090	COG0840	transmembrane signaling receptor activity
Dsui_1091	COG1651	Required for disulfide bond formation in some periplasmic proteins. Acts by transferring its disulfide bond to other proteins and is reduced in the process
Dsui_1092	COG0654	COG0654 2-polyprenyl-6-methoxyphenol hydroxylase and related FAD-dependent oxidoreductases
Dsui_1094	COG0703	Catalyzes the specific phosphorylation of the 3-hydroxyl group of shikimic acid using ATP as a cosubstrate
Dsui_1095	COG0337	Catalyzes the conversion of 3-deoxy-D-arabino- heptulosonate 7-phosphate (DAHP) to dehydroquinate (DHQ)
Dsui_1096	COG0069	glutamate synthase activity
Dsui_1096	COG0067	glutamate synthase
Dsui_1096	COG0070	glutamate synthase
Dsui_1099	COG1207	Catalyzes the last two sequential reactions in the de novo biosynthetic pathway for UDP-N-acetylglucosamine (UDP- GlcNAc). The C-terminal domain catalyzes the transfer of acetyl group from acetyl coenzyme A to glucosamine-1-phosphate (GlcN-1-P) to produce N-acetylglucosamine-1-phosphate (GlcNAc-1-P), which is converted into UDP-GlcNAc by the transfer of uridine 5- monophosphate (from uridine 5-triphosphate), a reaction catalyzed by the N-terminal domain
Dsui_1101	COG0449	glutamine-fructose-6-phosphate transaminase (isomerizing) activity
Dsui_1105	COG2185	Catalyzes the reversible interconversion of isobutyryl- CoA and n-butyryl-CoA, using radical chemistry. Also exhibits GTPase activity, associated with its G-protein domain (MeaI) that functions as a chaperone that assists cofactor delivery and proper holo-enzyme assembly
Dsui_1105	COG1703	isobutyryl-CoA mutase activity
Dsui_1105	COG1884	Catalyzes the reversible interconversion of isobutyryl- CoA and n-butyryl-CoA, using radical chemistry. Also exhibits GTPase activity, associated with its G-protein domain (MeaI) that functions as a chaperone that assists cofactor delivery and proper holo-enzyme assembly
Dsui_1108	COG1022	Amp-dependent synthetase and ligase
Dsui_1110	COG0559	Belongs to the binding-protein-dependent transport system permease family
Dsui_1115	COG1804	L-carnitine dehydratase bile acid-inducible protein F
Dsui_1116	COG0840	transmembrane signaling receptor activity
Dsui_1117	COG2703	oxygen carrier activity
Dsui_1119	COG0386	Belongs to the glutathione peroxidase family
Dsui_1120	COG1999	signal sequence binding
Dsui_1122	COG0129	dihydroxy-acid dehydratase activity
Dsui_1124	COG0682	Transfers the N-acyl diglyceride group on what will become the N-terminal cysteine of membrane lipoproteins
Dsui_1134	COG2814	Major facilitator Superfamily
Dsui_1146	COG3376	Belongs to the NiCoT transporter (TC 2.A.52) family
Dsui_1147	COG4191	Histidine kinase
Dsui_1149	COG0501	Belongs to the peptidase M48B family
Dsui_1151	COG0583	DNA-binding transcription factor activity
Dsui_1154	COG2204	response regulator
Dsui_1155	COG0223	Attaches a formyl group to the free amino group of methionyl-tRNA(fMet). The formyl group appears to play a dual role in the initiator identity of N-formylmethionyl-tRNA by promoting its recognition by IF2 and preventing the misappropriation of this tRNA by the elongation apparatus
Dsui_1155	COG1024	Enoyl-CoA hydratase
Dsui_1158	COG0309	Hydrogenase expression formation protein (HypE)
Dsui_1159	COG0409	Hydrogenase expression formation protein
Dsui_1160	COG0298	carbon dioxide binding
Dsui_1162	COG0068	Along with HypE, it catalyzes the synthesis of the CN ligands of the active site iron of NiFe -hydrogenases using carbamoylphosphate as a substrate. It functions as a carbamoyl transferase using carbamoylphosphate as a substrate and transferring the carboxamido moiety in an ATP-dependent reaction to the thiolate of the C-terminal cysteine of HypE yielding a protein-S-carboxamide
Dsui_1164	COG0375	protein maturation
Dsui_1166	COG1858	cytochrome C peroxidase
Dsui_1167	COG4133	protoheme IX ABC transporter activity
Dsui_1168	COG2386	Required for the export of heme to the periplasm for the biogenesis of c-type cytochromes
Dsui_1170	COG3114	Required for the export of heme to the periplasm for the biogenesis of c-type cytochromes
Dsui_1171	COG2332	Heme chaperone required for the biogenesis of c-type cytochromes. Transiently binds heme delivered by CcmC and transfers the heme to apo-cytochromes in a process facilitated by CcmF and CcmH
Dsui_1173	COG0526	COG0526, thiol-disulfide isomerase and thioredoxins
Dsui_1180	COG4567	Response regulator consisting of a CheY-like receiver domain and a Fis-type HTH domain
Dsui_1181	COG4191	Histidine kinase
Dsui_1182	COG0019	diaminopimelate decarboxylase activity
Dsui_1184	COG1965	Belongs to the frataxin family
Dsui_1185	COG1553	Part of a sulfur-relay system required for 2-thiolation of 5-methylaminomethyl-2-thiouridine (mnm(5)s(2)U) at tRNA wobble positions. Accepts sulfur from TusA and transfers it in turn to TusE
Dsui_1194	COG0621	Catalyzes the methylthiolation of N6- (dimethylallyl)adenosine (i(6)A), leading to the formation of 2- methylthio-N6-(dimethylallyl)adenosine (ms(2)i(6)A) at position 37 in tRNAs that read codons beginning with uridine
Dsui_1195	COG1702	phosphate starvation-inducible protein PhoH
Dsui_1196	COG0319	Single strand-specific metallo-endoribonuclease involved in late-stage 70S ribosome quality control and in maturation of the 3' terminus of the 16S rRNA
Dsui_1197	COG4535	Mg2 and Co2 transporter CorC
Dsui_1198	COG0815	Transfers the fatty acyl group on membrane lipoproteins
Dsui_1199	COG0752	glycyl-tRNA synthetase alpha subunit
Dsui_1200	COG0751	glycine-tRNA ligase activity
Dsui_1201	COG0241	D,D-heptose 1,7-bisphosphate phosphatase
Dsui_1207	COG2931	calcium- and calmodulin-responsive adenylate cyclase activity
Dsui_1209	COG0568	sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released
Dsui_1212	COG0828	Belongs to the bacterial ribosomal protein bS21 family
Dsui_1213	COG0533	Required for the formation of a threonylcarbamoyl group on adenosine at position 37 (t(6)A37) in tRNAs that read codons beginning with adenine. Is involved in the transfer of the threonylcarbamoyl moiety of threonylcarbamoyl-AMP (TC-AMP) to the N6 group of A37, together with TsaE and TsaB. TsaD likely plays a direct catalytic role in this reaction
Dsui_1214	COG0344	acyl-phosphate glycerol-3-phosphate acyltransferase activity
Dsui_1216	COG2606	Belongs to the prolyl-tRNA editing family. YbaK EbsC subfamily
Dsui_1217	COG4974	Belongs to the 'phage' integrase family
Dsui_1220	COG0014	Catalyzes the NADPH-dependent reduction of L-glutamate 5-phosphate into L-glutamate 5-semialdehyde and phosphate. The product spontaneously undergoes cyclization to form 1-pyrroline-5- carboxylate
Dsui_1222	COG1466	dna polymerase III delta subunit
Dsui_1224	COG0495	leucyl-tRNA aminoacylation
Dsui_1227	COG0210	DNA helicase
Dsui_1232	COG4663	Part of the tripartite ATP-independent periplasmic (TRAP) transport system
Dsui_1233	COG4663	Part of the tripartite ATP-independent periplasmic (TRAP) transport system
Dsui_1234	COG0312	modulator of DNA gyrase
Dsui_1235	COG3028	Belongs to the UPF0307 family
Dsui_1236	COG0521	Mo-molybdopterin cofactor biosynthetic process
Dsui_1238	COG0207	Catalyzes the reductive methylation of 2'-deoxyuridine- 5'-monophosphate (dUMP) to 2'-deoxythymidine-5'-monophosphate (dTMP) while utilizing 5,10-methylenetetrahydrofolate (mTHF) as the methyl donor and reductant in the reaction, yielding dihydrofolate (DHF) as a by-product. This enzymatic reaction provides an intracellular de novo source of dTMP, an essential precursor for DNA biosynthesis
Dsui_1239	COG0166	Belongs to the GPI family
Dsui_1245	COG1982	Orn Lys Arg decarboxylase major
Dsui_1246	COG0717	Belongs to the dCTP deaminase family
Dsui_1247	COG0489	protein tyrosine kinase activity
Dsui_1248	COG0073	Is required not only for elongation of protein synthesis but also for the initiation of all mRNA translation through initiator tRNA(fMet) aminoacylation
Dsui_1248	COG0143	Is required not only for elongation of protein synthesis but also for the initiation of all mRNA translation through initiator tRNA(fMet) aminoacylation
Dsui_1250	COG0659	secondary active sulfate transmembrane transporter activity
Dsui_1251	COG1254	Belongs to the acylphosphatase family
Dsui_1253	COG0450	alkyl hydroperoxide reductase
Dsui_1254	COG4771	TonB-dependent receptor
Dsui_1258	COG0583	DNA-binding transcription factor activity
Dsui_1259	COG1741	Belongs to the pirin family
Dsui_1261	COG0745	RESPONSE REGULATOR receiver
Dsui_1265	COG0112	Catalyzes the reversible interconversion of serine and glycine with tetrahydrofolate (THF) serving as the one-carbon carrier. This reaction serves as the major source of one-carbon groups required for the biosynthesis of purines, thymidylate, methionine, and other important biomolecules. Also exhibits THF- independent aldolase activity toward beta-hydroxyamino acids, producing glycine and aldehydes, via a retro-aldol mechanism
Dsui_1266	COG1327	Negatively regulates transcription of bacterial ribonucleotide reductase nrd genes and operons by binding to NrdR- boxes
Dsui_1267	COG1985	Converts 2,5-diamino-6-(ribosylamino)-4(3h)-pyrimidinone 5'-phosphate into 5-amino-6-(ribosylamino)-2,4(1h,3h)- pyrimidinedione 5'-phosphate
Dsui_1267	COG0117	Converts 2,5-diamino-6-(ribosylamino)-4(3h)-pyrimidinone 5'-phosphate into 5-amino-6-(ribosylamino)-2,4(1h,3h)- pyrimidinedione 5'-phosphate
Dsui_1268	COG0476	Involved in molybdopterin and thiamine biosynthesis, family 2
Dsui_1270	COG0793	Belongs to the peptidase S41A family
Dsui_1271	COG4942	peptidase
Dsui_1272	COG0640	Transcriptional regulator
Dsui_1273	COG0607	Catalyzes the ATP-dependent transfer of a sulfur to tRNA to produce 4-thiouridine in position 8 of tRNAs, which functions as a near-UV photosensor. Also catalyzes the transfer of sulfur to the sulfur carrier protein ThiS, forming ThiS-thiocarboxylate. This is a step in the synthesis of thiazole, in the thiamine biosynthesis pathway. The sulfur is donated as persulfide by IscS
Dsui_1275	COG1952	One of the proteins required for the normal export of preproteins out of the cell cytoplasm. It is a molecular chaperone that binds to a subset of precursor proteins, maintaining them in a translocation-competent state. It also specifically binds to its receptor SecA
Dsui_1277	COG0240	glycerol-3-phosphate dehydrogenase [NAD(P)+] activity
Dsui_1278	COG0219	Methylates the ribose at the nucleotide 34 wobble position in the two leucyl isoacceptors tRNA(Leu)(CmAA) and tRNA(Leu)(cmnm5UmAA). Catalyzes the methyl transfer from S- adenosyl-L-methionine to the 2'-OH of the wobble nucleotide
Dsui_1279	COG2804	Type II secretory pathway, ATPase PulE Tfp pilus assembly pathway, ATPase PilB
Dsui_1282	COG4969	Belongs to the N-Me-Phe pilin family
Dsui_1292	COG1450	Type ii and iii secretion system protein
Dsui_1293	COG3409	Peptidoglycan-binding domain 1 protein
Dsui_1293	COG3267	Type II secretory pathway component ExeA
Dsui_1295	COG3307	-O-antigen
Dsui_1297	COG0502	Catalyzes the conversion of dethiobiotin (DTB) to biotin by the insertion of a sulfur atom into dethiobiotin via a radical- based mechanism
Dsui_1298	COG2226	methyltransferase
Dsui_1299	COG2717	Part of the MsrPQ system that repairs oxidized periplasmic proteins containing methionine sulfoxide residues (Met-O), using respiratory chain electrons. Thus protects these proteins from oxidative-stress damage caused by reactive species of oxygen and chlorine generated by the host defense mechanisms. MsrPQ is essential for the maintenance of envelope integrity under bleach stress, rescuing a wide series of structurally unrelated periplasmic proteins from methionine oxidation. MsrQ provides electrons for reduction to the reductase catalytic subunit MsrP, using the quinone pool of the respiratory chain
Dsui_1300	COG2041	Part of the MsrPQ system that repairs oxidized periplasmic proteins containing methionine sulfoxide residues (Met-O), using respiratory chain electrons. Thus protects these proteins from oxidative-stress damage caused by reactive species of oxygen and chlorine generated by the host defense mechanisms. MsrPQ is essential for the maintenance of envelope integrity under bleach stress, rescuing a wide series of structurally unrelated periplasmic proteins from methionine oxidation. The catalytic subunit MsrP is non-stereospecific, being able to reduce both (R-) and (S-) diastereoisomers of methionine sulfoxide
Dsui_1302	COG1595	DNA-templated transcription, initiation
Dsui_1305	COG0218	Necessary for normal cell division and for the maintenance of normal septation
Dsui_1309	COG0548	Belongs to the acetylglutamate kinase family. ArgB subfamily
Dsui_1310	COG0071	Belongs to the small heat shock protein (HSP20) family
Dsui_1312	COG0494	nUDIX hydrolase
Dsui_1315	COG0173	Aspartyl-tRNA synthetase with relaxed tRNA specificity since it is able to aspartylate not only its cognate tRNA(Asp) but also tRNA(Asn). Reaction proceeds in two steps L-aspartate is first activated by ATP to form Asp-AMP and then transferred to the acceptor end of tRNA(Asp Asn)
Dsui_1318	COG1989	Cleaves type-4 fimbrial leader sequence and methylates the N-terminal (generally Phe) residue
Dsui_1321	COG0755	Required for the export of heme to the periplasm for the biogenesis of c-type cytochromes
Dsui_1322	COG0541	Involved in targeting and insertion of nascent membrane proteins into the cytoplasmic membrane. Binds to the hydrophobic signal sequence of the ribosome-nascent chain (RNC) as it emerges from the ribosomes. The SRP-RNC complex is then targeted to the cytoplasmic membrane where it interacts with the SRP receptor FtsY
Dsui_1323	COG0741	lytic transglycosylase activity
Dsui_1324	COG0442	prolyl-tRNA aminoacylation
Dsui_1325	COG0494	nUDIX hydrolase
Dsui_1328	COG2941	Oxygenase that introduces the hydroxyl group at carbon five of 2-nonaprenyl-3-methyl-6-methoxy-1,4-benzoquinol resulting in the formation of 2-nonaprenyl-3-methyl-5-hydroxy-6-methoxy-1,4- benzoquinol
Dsui_1329	COG1765	OsmC-like protein
Dsui_1330	COG0102	This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly
Dsui_1331	COG0103	maturation of SSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)
Dsui_1334	COG0316	Belongs to the HesB IscA family
Dsui_1335	COG1388	LysM domain
Dsui_1335	COG4942	peptidase
Dsui_1341	COG0225	Has an important function as a repair enzyme for proteins that have been inactivated by oxidation. Catalyzes the reversible oxidation-reduction of methionine sulfoxide in proteins to methionine
Dsui_1343	COG0596	Alpha beta hydrolase
Dsui_1345	COG0598	Magnesium transport protein CorA
Dsui_1346	COG1179	involved in molybdopterin and THIamine biosynthesis family 1
Dsui_1348	COG2703	oxygen carrier activity
Dsui_1351	COG0513	Belongs to the DEAD box helicase family
Dsui_1352	COG2030	dehydratase
Dsui_1354	COG1167	Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain MocR family and their eukaryotic orthologs
Dsui_1358	COG0739	heme binding
Dsui_1359	COG0284	orotidine-5'-phosphate decarboxylase activity
Dsui_1361	COG3447	MASE1 domain protein
Dsui_1361	COG5002	protein histidine kinase activity
Dsui_1361	COG5001	Diguanylate cyclase
Dsui_1364	COG3850	Histidine kinase
Dsui_1366	COG0008	Catalyzes the attachment of glutamate to tRNA(Glu) in a two-step reaction glutamate is first activated by ATP to form Glu-AMP and then transferred to the acceptor end of tRNA(Glu)
Dsui_1367	COG0239	Important for reducing fluoride concentration in the cell, thus reducing its toxicity
Dsui_1371	COG0583	DNA-binding transcription factor activity
Dsui_1372	COG0840	transmembrane signaling receptor activity
Dsui_1373	COG1643	Atp-dependent helicase
Dsui_1378	COG1024	Enoyl-CoA hydratase
Dsui_1379	COG1934	Involved in the assembly of lipopolysaccharide (LPS). Required for the translocation of LPS from the inner membrane to the outer membrane. May form a bridge between the inner membrane and the outer membrane, via interactions with LptC and LptD, thereby facilitating LPS transfer across the periplasm
Dsui_1381	COG1778	Involved in the biosynthesis of lipopolysaccharides (LPSs). Catalyzes the hydrolysis of 3-deoxy-D-manno-octulosonate 8-phosphate (KDO 8-P) to 3-deoxy-D-manno-octulosonate (KDO) and inorganic phosphate
Dsui_1392	COG1459	type II secretion system
Dsui_1396	COG3267	Type II secretory pathway component ExeA
Dsui_1396	COG3409	Peptidoglycan-binding domain 1 protein
Dsui_1398	COG1127	ABC transporter
Dsui_1399	COG0767	ABC-type transport system involved in resistance to organic solvents, permease component
Dsui_1400	COG1463	ABC-type transport system involved in resistance to organic solvents, periplasmic component
Dsui_1401	COG2853	Lipoprotein
Dsui_1403	COG3113	response to antibiotic
Dsui_1404	COG1131	(ABC) transporter
Dsui_1405	COG0842	Transport permease protein
Dsui_1406	COG5007	Belongs to the BolA IbaG family
Dsui_1407	COG0766	Cell wall formation. Adds enolpyruvyl to UDP-N- acetylglucosamine
Dsui_1410	COG0040	Catalyzes the condensation of ATP and 5-phosphoribose 1- diphosphate to form N'-(5'-phosphoribosyl)-ATP (PR-ATP). Has a crucial role in the pathway because the rate of histidine biosynthesis seems to be controlled primarily by regulation of hisG enzymatic activity
Dsui_1411	COG0141	Catalyzes the sequential NAD-dependent oxidations of L- histidinol to L-histidinaldehyde and then to L-histidine
Dsui_1414	COG0079	Belongs to the class-II pyridoxal-phosphate-dependent aminotransferase family. Histidinol-phosphate aminotransferase subfamily
Dsui_1415	COG0131	Imidazoleglycerol-phosphate dehydratase
Dsui_1416	COG0118	IGPS catalyzes the conversion of PRFAR and glutamine to IGP, AICAR and glutamate. The HisH subunit provides the glutamine amidotransferase activity that produces the ammonia necessary to HisF for the synthesis of IGP and AICAR
Dsui_1417	COG0106	1-(5-phosphoribosyl)-5- 5-phosphoribosylamino)methylideneamino imidazole-4-carboxamide isomerase
Dsui_1418	COG0107	imidazoleglycerol-phosphate synthase activity
Dsui_1419	COG0139	Catalyzes the hydrolysis of the adenine ring of phosphoribosyl-AMP
Dsui_1420	COG0140	phosphoribosyl-ATP diphosphatase activity
Dsui_1422	COG1826	Part of the twin-arginine translocation (Tat) system that transports large folded proteins containing a characteristic twin-arginine motif in their signal peptide across membranes
Dsui_1423	COG1826	Part of the twin-arginine translocation (Tat) system that transports large folded proteins containing a characteristic twin-arginine motif in their signal peptide across membranes
Dsui_1425	COG0121	glutamine amidotransferase
Dsui_1426	COG0265	Trypsin-like serine proteases, typically periplasmic, contain C-terminal PDZ domain
Dsui_1427	COG0327	Belongs to the GTP cyclohydrolase I type 2 NIF3 family
Dsui_1430	COG5001	Diguanylate cyclase
Dsui_1430	COG3706	GGDEF domain
Dsui_1430	COG2203	Gaf domain
Dsui_1430	COG4251	negative regulation of phosphorylation
Dsui_1432	COG2201	protein-glutamate methylesterase activity
Dsui_1433	COG1871	Probably deamidates glutamine residues to glutamate on methyl-accepting chemotaxis receptors (MCPs), playing an important role in chemotaxis
Dsui_1434	COG1352	Methylation of the membrane-bound methyl-accepting chemotaxis proteins (MCP) to form gamma-glutamyl methyl ester residues in MCP
Dsui_1435	COG0835	chemotaxis
Dsui_1436	COG0840	transmembrane signaling receptor activity
Dsui_1437	COG2198	Histidine kinase
Dsui_1437	COG0643	Histidine kinase
Dsui_1442	COG0534	Mate efflux family protein
Dsui_1445	COG0045	succinate-CoA ligase (ADP-forming) activity
Dsui_1446	COG0074	Succinyl-CoA synthetase functions in the citric acid cycle (TCA), coupling the hydrolysis of succinyl-CoA to the synthesis of either ATP or GTP and thus represents the only step of substrate-level phosphorylation in the TCA. The alpha subunit of the enzyme binds the substrates coenzyme A and phosphate, while succinate binding and nucleotide specificity is provided by the beta subunit
Dsui_1447	COG0861	Integral membrane protein TerC family
Dsui_1449	COG0515	serine threonine protein kinase
Dsui_1449	COG2815	serine threonine protein kinase
Dsui_1450	COG0631	protein serine/threonine phosphatase activity
Dsui_1454	COG0664	- Catabolite gene activator and regulatory subunit of cAMP-dependent protein
Dsui_1461	COG0845	Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family
Dsui_1462	COG1136	(ABC) transporter
Dsui_1463	COG3284	Transcriptional regulator
Dsui_1464	COG1012	belongs to the aldehyde dehydrogenase family
Dsui_1467	COG0577	efflux transmembrane transporter activity
Dsui_1467	COG1136	(ABC) transporter
Dsui_1469	COG0853	Catalyzes the pyruvoyl-dependent decarboxylation of aspartate to produce beta-alanine
Dsui_1470	COG0414	Catalyzes the condensation of pantoate with beta-alanine in an ATP-dependent reaction via a pantoyl-adenylate intermediate
Dsui_1471	COG0413	3-methyl-2-oxobutanoate hydroxymethyltransferase activity
Dsui_1472	COG0125	Phosphorylation of dTMP to form dTDP in both de novo and salvage pathways of dTTP synthesis
Dsui_1473	COG0840	transmembrane signaling receptor activity
Dsui_1491	COG0071	Belongs to the small heat shock protein (HSP20) family
Dsui_1492	COG0542	response to heat
Dsui_1494	COG0465	Acts as a processive, ATP-dependent zinc metallopeptidase for both cytoplasmic and membrane proteins. Plays a role in the quality control of integral membrane proteins
Dsui_1503	COG0501	Belongs to the peptidase M48B family
Dsui_1504	COG0265	Trypsin-like serine proteases, typically periplasmic, contain C-terminal PDZ domain
Dsui_1510	COG2826	transposase and inactivated derivatives, IS30 family
Dsui_1512	COG1055	Involved in arsenical resistance. Thought to form the channel of an arsenite pump
Dsui_1515	COG0617	tRNA 3'-terminal CCA addition
Dsui_1518	COG0628	permease
Dsui_1520	COG4654	Cytochrome c, class I
Dsui_1522	COG2815	serine threonine protein kinase
Dsui_1522	COG0515	serine threonine protein kinase
Dsui_1523	COG2814	Major facilitator Superfamily
Dsui_1525	COG1613	Sulfate ABC transporter periplasmic sulfate-binding protein
Dsui_1528	COG2205	protein histidine kinase activity
Dsui_1529	COG0745	RESPONSE REGULATOR receiver
Dsui_1533	COG1495	Required for disulfide bond formation in some periplasmic proteins. Acts by oxidizing the DsbA protein
Dsui_1534	COG0267	Belongs to the bacterial ribosomal protein bL33 family
Dsui_1535	COG0227	Belongs to the bacterial ribosomal protein bL28 family
Dsui_1537	COG2003	Belongs to the UPF0758 family
Dsui_1538	COG0452	Catalyzes two steps in the biosynthesis of coenzyme A. In the first step cysteine is conjugated to 4'-phosphopantothenate to form 4-phosphopantothenoylcysteine, in the latter compound is decarboxylated to form 4'-phosphopantotheine
Dsui_1539	COG0756	dUTP diphosphatase activity
Dsui_1540	COG0446	pyridine nucleotide-disulphide oxidoreductase
Dsui_1542	COG1196	nuclear chromosome segregation
Dsui_1542	COG3264	Mechanosensitive ion channel
Dsui_1543	COG0781	Involved in transcription antitermination. Required for transcription of ribosomal RNA (rRNA) genes. Binds specifically to the boxA antiterminator sequence of the ribosomal RNA (rrn) operons
Dsui_1543	COG0144	Specifically methylates the cytosine at position 967 (m5C967) of 16S rRNA
Dsui_1545	COG0299	Catalyzes the transfer of a formyl group from 10- formyltetrahydrofolate to 5-phospho-ribosyl-glycinamide (GAR), producing 5-phospho-ribosyl-N-formylglycinamide (FGAR) and tetrahydrofolate
Dsui_1547	COG0586	Pfam SNARE associated Golgi protein
Dsui_1548	COG0784	Response regulator, receiver
Dsui_1549	COG4251	negative regulation of phosphorylation
Dsui_1550	COG5001	Diguanylate cyclase
Dsui_1551	COG0323	This protein is involved in the repair of mismatches in DNA. It is required for dam-dependent methyl-directed DNA mismatch repair. May act as a molecular matchmaker , a protein that promotes the formation of a stable complex between two or more DNA-binding proteins in an ATP-dependent manner without itself being part of a final effector complex
Dsui_1552	COG0324	Catalyzes the transfer of a dimethylallyl group onto the adenine at position 37 in tRNAs that read codons beginning with uridine, leading to the formation of N6-(dimethylallyl)adenosine (i(6)A)
Dsui_1555	COG0841	Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family
Dsui_1557	COG0126	phosphoglycerate kinase activity
Dsui_1558	COG0057	glyceraldehyde-3-phosphate dehydrogenase (NAD+) (phosphorylating) activity
Dsui_1560	COG0057	glyceraldehyde-3-phosphate dehydrogenase (NAD+) (phosphorylating) activity
Dsui_1561	COG0021	Catalyzes the transfer of a two-carbon ketol group from a ketose donor to an aldose acceptor, via a covalent intermediate with the cofactor thiamine pyrophosphate
Dsui_1563	COG0158	D-fructose-1,6-bisphosphate 1-phosphohydrolase class 1
Dsui_1565	COG5002	protein histidine kinase activity
Dsui_1565	COG5001	Diguanylate cyclase
Dsui_1568	COG1385	rRNA (uridine-N3-)-methyltransferase activity
Dsui_1570	COG1246	Belongs to the acetyltransferase family. ArgA subfamily
Dsui_1570	COG0548	Belongs to the acetylglutamate kinase family. ArgB subfamily
Dsui_1571	COG2924	Could be a mediator in iron transactions between iron acquisition and iron-requiring processes, such as synthesis and or repair of Fe-S clusters in biosynthetic enzymes
Dsui_1574	COG0120	Catalyzes the reversible conversion of ribose-5- phosphate to ribulose 5-phosphate
Dsui_1576	COG1249	Belongs to the class-I pyridine nucleotide-disulfide oxidoreductase family
Dsui_1577	COG0508	dehydrogenase complex catalyzes the overall conversion of
Dsui_1578	COG2609	component of the pyruvate dehydrogenase (PDH) complex, that catalyzes the overall conversion of pyruvate to acetyl-CoA and CO(2)
Dsui_1581	COG4566	intracellular signal transduction
Dsui_1582	COG0247	lactate metabolic process
Dsui_1583	COG1139	Iron-sulfur cluster binding protein
Dsui_1584	COG1556	Lactate utilization protein
Dsui_1585	COG1995	Catalyzes the NAD(P)-dependent oxidation of 4- (phosphohydroxy)-L-threonine (HTP) into 2-amino-3-oxo-4- (phosphohydroxy)butyric acid which spontaneously decarboxylates to form 3-amino-2-oxopropyl phosphate (AHAP)
Dsui_1586	COG0760	Chaperone involved in the correct folding and assembly of outer membrane proteins. Recognizes specific patterns of aromatic residues and the orientation of their side chains, which are found more frequently in integral outer membrane proteins. May act in both early periplasmic and late outer membrane-associated steps of protein maturation
Dsui_1587	COG1452	involved in the assembly of lipopolysaccharide (LPS) at the surface of the outer membrane
Dsui_1591	COG0006	proline dipeptidase activity
Dsui_1592	COG0654	COG0654 2-polyprenyl-6-methoxyphenol hydroxylase and related FAD-dependent oxidoreductases
Dsui_1596	COG0151	Belongs to the GarS family
Dsui_1597	COG0408	coproporphyrinogen oxidase activity
Dsui_1600	COG2959	enzyme of heme biosynthesis
Dsui_1602	COG0181	hydroxymethylbilane synthase activity
Dsui_1603	COG2352	Forms oxaloacetate, a four-carbon dicarboxylic acid source for the tricarboxylic acid cycle
Dsui_1606	COG0265	Trypsin-like serine proteases, typically periplasmic, contain C-terminal PDZ domain
Dsui_1617	COG0745	RESPONSE REGULATOR receiver
Dsui_1618	COG0642	Histidine kinase
Dsui_1619	COG2194	sulfuric ester hydrolase activity
Dsui_1625	COG2217	Heavy metal translocating P-type atpase
Dsui_1627	COG3278	Belongs to the heme-copper respiratory oxidase family
Dsui_1635	COG1236	Exonuclease of the beta-lactamase fold involved in RNA processing
Dsui_1636	COG3243	poly(R)-hydroxyalkanoic acid synthase
Dsui_1645	COG3945	hemerythrin HHE cation binding domain
Dsui_1646	COG0664	- Catabolite gene activator and regulatory subunit of cAMP-dependent protein
Dsui_1647	COG0635	Involved in the biosynthesis of porphyrin-containing compound
Dsui_1650	COG2217	Heavy metal translocating P-type atpase
Dsui_1653	COG1918	ferrous iron import across plasma membrane
Dsui_1653	COG0370	Transporter of a GTP-driven Fe(2 ) uptake system
Dsui_1655	COG0672	)-iron permease
Dsui_1656	COG4633	Protein conserved in bacteria
Dsui_1666	COG3128	pkhd-type hydroxylase
Dsui_1667	COG4774	siderophore transport
Dsui_1669	COG0265	Trypsin-like serine proteases, typically periplasmic, contain C-terminal PDZ domain
Dsui_1670	COG1858	cytochrome C peroxidase
Dsui_1671	COG4771	TonB-dependent receptor
Dsui_1677	COG0522	One of the primary rRNA binding proteins, it binds directly to 16S rRNA where it nucleates assembly of the body of the 30S subunit
Dsui_1679	COG1429	ligase activity, forming nitrogen-metal bonds
Dsui_1680	COG4771	TonB-dependent receptor
Dsui_1686	COG0171	NAD+ synthase (glutamine-hydrolyzing) activity
Dsui_1686	COG0388	Catalyzes the ATP-dependent amidation of deamido-NAD to form NAD. Uses L-glutamine as a nitrogen source
Dsui_1687	COG0347	Belongs to the P(II) protein family
Dsui_1688	COG2840	Smr protein MutS2
Dsui_1689	COG0492	ferredoxin-NADP+ reductase activity
Dsui_1691	COG1674	ftsk spoiiie
Dsui_1692	COG2834	Participates in the translocation of lipoproteins from the inner membrane to the outer membrane. Only forms a complex with a lipoprotein if the residue after the N-terminal Cys is not an aspartate (The Asp acts as a targeting signal to indicate that the lipoprotein should stay in the inner membrane)
Dsui_1694	COG2256	atpase related to the helicase subunit of the holliday junction resolvase
Dsui_1696	COG0172	Catalyzes the attachment of serine to tRNA(Ser). Is also able to aminoacylate tRNA(Sec) with serine, to form the misacylated tRNA L-seryl-tRNA(Sec), which will be further converted into selenocysteinyl-tRNA(Sec)
Dsui_1697	COG4623	carbon-oxygen lyase activity, acting on polysaccharides
Dsui_1704	COG1291	archaeal or bacterial-type flagellum-dependent cell motility
Dsui_1705	COG1360	Flagellar Motor Protein
Dsui_1708	COG0643	Histidine kinase
Dsui_1708	COG2198	Histidine kinase
Dsui_1709	COG0835	chemotaxis
Dsui_1710	COG0840	transmembrane signaling receptor activity
Dsui_1710	COG0840	transmembrane signaling receptor activity
Dsui_1711	COG1352	Methylation of the membrane-bound methyl-accepting chemotaxis proteins (MCP) to form gamma-glutamyl methyl ester residues in MCP
Dsui_1712	COG1871	Probably deamidates glutamine residues to glutamate on methyl-accepting chemotaxis receptors (MCPs), playing an important role in chemotaxis
Dsui_1713	COG2201	protein-glutamate methylesterase activity
Dsui_1716	COG0840	transmembrane signaling receptor activity
Dsui_1717	COG0784	Response regulator, receiver
Dsui_1717	COG0835	chemotaxis
Dsui_1718	COG0784	Response regulator, receiver
Dsui_1718	COG0835	chemotaxis
Dsui_1719	COG0745	RESPONSE REGULATOR receiver
Dsui_1720	COG3143	Plays an important role in bacterial chemotaxis signal transduction pathway by accelerating the dephosphorylation of phosphorylated CheY (CheY-P)
Dsui_1721	COG0643	Histidine kinase
Dsui_1721	COG2198	Histidine kinase
Dsui_1727	COG1291	archaeal or bacterial-type flagellum-dependent cell motility
Dsui_1732	COG1815	bacterial-type flagellum-dependent cell motility
Dsui_1733	COG1558	bacterial-type flagellum-dependent cell motility
Dsui_1734	COG1843	Required for flagellar hook formation. May act as a scaffolding protein
Dsui_1735	COG1749	Flagellar hook protein flgE
Dsui_1736	COG4787	bacterial-type flagellum-dependent cell motility
Dsui_1737	COG4786	Flagellar basal body rod
Dsui_1738	COG2063	Assembles around the rod to form the L-ring and probably protects the motor basal body from shearing forces during rotation
Dsui_1739	COG1706	bacterial-type flagellum-dependent cell motility
Dsui_1740	COG1705	Flagellar rod assembly protein muramidase FlgJ
Dsui_1740	COG3951	Flagellar rod assembly protein muramidase FlgJ
Dsui_1741	COG1256	bacterial-type flagellum assembly
Dsui_1742	COG1344	Flagellin is the subunit protein which polymerizes to form the filaments of bacterial flagella
Dsui_1745	COG1987	bacterial-type flagellum assembly
Dsui_1746	COG1338	Plays a role in the flagellum-specific transport system
Dsui_1747	COG3190	flagellar
Dsui_1748	COG1886	FliN is one of three proteins (FliG, FliN, FliM) that form the rotor-mounted switch complex (C ring), located at the base of the basal body. This complex interacts with the CheY and CheZ chemotaxis proteins, in addition to contacting components of the motor that determine the direction of flagellar rotation
Dsui_1749	COG1868	FliM is one of three proteins (FliG, FliN, FliM) that forms the rotor-mounted switch complex (C ring), located at the base of the basal body. This complex interacts with the CheY and CheZ chemotaxis proteins, in addition to contacting components of the motor that determine the direction of flagellar rotation
Dsui_1751	COG3144	bacterial-type flagellum assembly
Dsui_1753	COG1157	protein secretion by the type III secretion system
Dsui_1755	COG1536	FliG is one of three proteins (FliG, FliN, FliM) that forms the rotor-mounted switch complex (C ring), located at the base of the basal body. This complex interacts with the CheY and CheZ chemotaxis proteins, in addition to contacting components of the motor that determine the direction of flagellar rotation
Dsui_1757	COG2205	protein histidine kinase activity
Dsui_1757	COG0784	Response regulator, receiver
Dsui_1758	COG2204	response regulator
Dsui_1759	COG1677	Flagellar hook-basal body complex protein FliE
Dsui_1767	COG2227	3-demethylubiquinone-9 3-O-methyltransferase activity
Dsui_1776	COG5581	Acts as a flagellar brake, regulating swimming and swarming in a bis-(3'-5') cyclic diguanylic acid (c-di-GMP)- dependent manner. Binds 1 c-di-GMP dimer per subunit. Increasing levels of c-di-GMP lead to decreased motility
Dsui_1777	COG2257	FlhB HrpN YscU SpaS Family
Dsui_1783	COG1344	Flagellin is the subunit protein which polymerizes to form the filaments of bacterial flagella
Dsui_1784	COG1344	Flagellin is the subunit protein which polymerizes to form the filaments of bacterial flagella
Dsui_1787	COG0438	transferase activity, transferring glycosyl groups
Dsui_1787	COG1216	Glycosyl transferase, family 2
Dsui_1789	COG3706	GGDEF domain
Dsui_1789	COG0745	RESPONSE REGULATOR receiver
Dsui_1791	COG0582	viral genome integration into host DNA
Dsui_1800	COG1414	Transcriptional regulator
Dsui_1809	COG2812	DNA polymerase III is a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria. This DNA polymerase also exhibits 3' to 5' exonuclease activity
Dsui_1810	COG0718	Binds to DNA and alters its conformation. May be involved in regulation of gene expression, nucleoid organization and DNA protection
Dsui_1811	COG0353	May play a role in DNA repair. It seems to be involved in an RecBC-independent recombinational process of DNA repair. It may act with RecF and RecO
Dsui_1812	COG0723	plastoquinol--plastocyanin reductase activity
Dsui_1813	COG1290	Component of the ubiquinol-cytochrome c reductase complex (complex III or cytochrome b-c1 complex), which is a respiratory chain that generates an electrochemical potential coupled to ATP synthesis
Dsui_1814	COG2857	Cytochrome c1
Dsui_1815	COG0625	glutathione transferase activity
Dsui_1816	COG2969	positive regulation of protein catabolic process
Dsui_1817	COG0243	molybdopterin cofactor binding
Dsui_1818	COG0547	Catalyzes the transfer of the phosphoribosyl group of 5- phosphorylribose-1-pyrophosphate (PRPP) to anthranilate to yield N-(5'-phosphoribosyl)-anthranilate (PRA)
Dsui_1819	COG1942	4-Oxalocrotonate Tautomerase
Dsui_1825	COG1251	Belongs to the nitrite and sulfite reductase 4Fe-4S domain family
Dsui_1826	COG2146	nitrite reductase [NAD(P)H] activity
Dsui_1828	COG3707	response regulator
Dsui_1831	COG0715	COG0715 ABC-type nitrate sulfonate bicarbonate transport systems periplasmic components
Dsui_1833	COG1116	anion transmembrane transporter activity
Dsui_1835	COG0438	transferase activity, transferring glycosyl groups
Dsui_1845	COG0306	phosphate transporter
Dsui_1846	COG2829	1-acyl-2-lysophosphatidylserine acylhydrolase activity
Dsui_1848	COG0798	PFAM Bile acid sodium symporter
Dsui_1849	COG0394	Belongs to the low molecular weight phosphotyrosine protein phosphatase family
Dsui_1851	COG2205	protein histidine kinase activity
Dsui_1852	COG0745	RESPONSE REGULATOR receiver
Dsui_1856	COG1942	4-Oxalocrotonate Tautomerase
Dsui_1858	COG0583	DNA-binding transcription factor activity
Dsui_1860	COG0840	transmembrane signaling receptor activity
Dsui_1865	COG2205	protein histidine kinase activity
Dsui_1865	COG5002	protein histidine kinase activity
Dsui_1865	COG0784	Response regulator, receiver
Dsui_1866	COG0745	RESPONSE REGULATOR receiver
Dsui_1867	COG4999	Histidine kinase
Dsui_1867	COG3850	Histidine kinase
Dsui_1867	COG3437	response regulator, receiver
Dsui_1867	COG2205	protein histidine kinase activity
Dsui_1870	COG1538	Outer membrane efflux protein
Dsui_1874	COG1742	UPF0060 membrane protein
Dsui_1876	COG1309	transcriptional regulator
Dsui_1877	COG1902	pentaerythritol trinitrate reductase activity
Dsui_1878	COG0697	spore germination
Dsui_1879	COG2141	COG2141 Coenzyme F420-dependent N5,N10-methylene tetrahydromethanopterin reductase and related flavin-dependent oxidoreductases
Dsui_1884	COG5002	protein histidine kinase activity
Dsui_1885	COG2204	response regulator
Dsui_1888	COG1418	mRNA catabolic process
Dsui_1888	COG0711	Component of the F(0) channel, it forms part of the peripheral stalk, linking F(1) to F(0)
Dsui_1891	COG4948	Mandelate Racemase Muconate Lactonizing
Dsui_1895	COG1704	LemA family
Dsui_1896	COG2814	Major facilitator Superfamily
Dsui_1899	COG0566	Belongs to the class IV-like SAM-binding methyltransferase superfamily. RNA methyltransferase TrmH family
Dsui_1904	COG1448	Aminotransferase
Dsui_1905	COG3437	response regulator, receiver
Dsui_1905	COG3850	Histidine kinase
Dsui_1905	COG2205	protein histidine kinase activity
Dsui_1905	COG4999	Histidine kinase
Dsui_1906	COG1811	Na channel or pump
Dsui_1907	COG0583	DNA-binding transcription factor activity
Dsui_1908	COG0820	rRNA (adenine-C2-)-methyltransferase activity
Dsui_1911	COG1475	DNA binding
Dsui_1912	COG4567	Response regulator consisting of a CheY-like receiver domain and a Fis-type HTH domain
Dsui_1916	COG1294	oxidase, subunit
Dsui_1918	COG1944	ATP diphosphatase activity
Dsui_1919	COG1429	ligase activity, forming nitrogen-metal bonds
Dsui_1922	COG4771	TonB-dependent receptor
Dsui_1923	COG0208	Provides the precursors necessary for DNA synthesis. Catalyzes the biosynthesis of deoxyribonucleotides from the corresponding ribonucleotides
Dsui_1924	COG0209	Provides the precursors necessary for DNA synthesis. Catalyzes the biosynthesis of deoxyribonucleotides from the corresponding ribonucleotides
Dsui_1924	COG1327	Negatively regulates transcription of bacterial ribonucleotide reductase nrd genes and operons by binding to NrdR- boxes
Dsui_1925	COG0028	Belongs to the TPP enzyme family
Dsui_1926	COG0440	acetolactate synthase activity
Dsui_1933	COG0546	phosphoglycolate phosphatase activity
Dsui_1934	COG2227	3-demethylubiquinone-9 3-O-methyltransferase activity
Dsui_1936	COG0402	S-adenosylhomocysteine deaminase activity
Dsui_1939	COG1932	Catalyzes the reversible conversion of 3- phosphohydroxypyruvate to phosphoserine and of 3-hydroxy-2-oxo-4- phosphonooxybutanoate to phosphohydroxythreonine
Dsui_1942	COG0128	3-phosphoshikimate 1-carboxyvinyltransferase activity
Dsui_1944	COG0776	regulation of translation
Dsui_1946	COG2956	Modulates cellular lipopolysaccharide (LPS) levels by regulating LpxC, which is involved in lipid A biosynthesis. May act by modulating the proteolytic activity of FtsH towards LpxC. May also coordinate assembly of proteins involved in LPS synthesis at the plasma membrane
Dsui_1952	COG2870	Catalyzes the ADP transfer from ATP to D-glycero-beta-D- manno-heptose 1-phosphate, yielding ADP-D-glycero-beta-D-manno- heptose
Dsui_1953	COG0451	ADP-glyceromanno-heptose 6-epimerase activity
Dsui_1958	COG0441	Catalyzes the attachment of threonine to tRNA(Thr) in a two-step reaction L-threonine is first activated by ATP to form Thr-AMP and then transferred to the acceptor end of tRNA(Thr)
Dsui_1959	COG0290	IF-3 binds to the 30S ribosomal subunit and shifts the equilibrum between 70S ribosomes and their 50S and 30S subunits in favor of the free subunits, thus enhancing the availability of 30S subunits on which protein synthesis initiation begins
Dsui_1960	COG0291	Belongs to the bacterial ribosomal protein bL35 family
Dsui_1961	COG0292	Binds directly to 23S ribosomal RNA and is necessary for the in vitro assembly process of the 50S ribosomal subunit. It is not involved in the protein synthesizing functions of that subunit
Dsui_1962	COG0016	Belongs to the class-II aminoacyl-tRNA synthetase family. Phe-tRNA synthetase alpha subunit type 1 subfamily
Dsui_1963	COG0073	Is required not only for elongation of protein synthesis but also for the initiation of all mRNA translation through initiator tRNA(fMet) aminoacylation
Dsui_1963	COG0072	phenylalanine-tRNA ligase activity
Dsui_1964	COG0776	regulation of translation
Dsui_1968	COG0496	Nucleotidase that shows phosphatase activity on nucleoside 5'-monophosphates
Dsui_1969	COG2518	Catalyzes the methyl esterification of L-isoaspartyl residues in peptides and proteins that result from spontaneous decomposition of normal L-aspartyl and L-asparaginyl residues. It plays a role in the repair and or degradation of damaged proteins
Dsui_1972	COG2951	lytic endotransglycosylase activity
Dsui_1975	COG0714	Associated with various cellular activities
Dsui_1976	COG0123	including yeast histone deacetylase and acetoin utilization protein
Dsui_1977	COG0329	Catalyzes the condensation of (S)-aspartate-beta- semialdehyde (S)-ASA and pyruvate to 4-hydroxy- tetrahydrodipicolinate (HTPA)
Dsui_1978	COG3317	Gram-negative-bacterium-type cell outer membrane assembly
Dsui_1981	COG2265	Belongs to the class I-like SAM-binding methyltransferase superfamily. RNA M5U methyltransferase family
Dsui_1982	COG2895	sulfate adenylyltransferase (ATP) activity
Dsui_1984	COG0175	sulfate reduction
Dsui_1987	COG0730	response to heat
Dsui_1988	COG0583	DNA-binding transcription factor activity
Dsui_1989	COG0360	Binds together with S18 to 16S ribosomal RNA
Dsui_1990	COG2965	DNA replication, synthesis of RNA primer
Dsui_1991	COG0238	Binds as a heterodimer with protein S6 to the central domain of the 16S rRNA, where it helps stabilize the platform of the 30S subunit
Dsui_1992	COG0359	binds to the 23S rRNA
Dsui_1993	COG0305	Participates in initiation and elongation during chromosome replication
Dsui_1996	COG1875	ATPase related to phosphate starvation-inducible protein PhoH
Dsui_1997	COG1225	Alkyl hydroperoxide reductase Thiol specific antioxidant Mal allergen
Dsui_1999	COG0251	oxidation-reduction process
Dsui_2003	COG0365	Catalyzes the conversion of acetate into acetyl-CoA (AcCoA), an essential intermediate at the junction of anabolic and catabolic pathways. AcsA undergoes a two-step reaction. In the first half reaction, AcsA combines acetate with ATP to form acetyl-adenylate (AcAMP) intermediate. In the second half reaction, it can then transfer the acetyl group from AcAMP to the sulfhydryl group of CoA, forming the product AcCoA
Dsui_2004	COG0517	IMP dehydrogenase activity
Dsui_2004	COG0516	GMP reductase activity
Dsui_2005	COG2176	DNA-directed DNA polymerase activity
Dsui_2006	COG4147	Belongs to the sodium solute symporter (SSF) (TC 2.A.21) family
Dsui_2017	COG0194	GDP metabolic process
Dsui_2023	COG0583	DNA-binding transcription factor activity
Dsui_2025	COG0845	Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family
Dsui_2027	COG1538	Outer membrane efflux protein
Dsui_2028	COG2827	Endonuclease containing a URI domain
Dsui_2033	COG0583	DNA-binding transcription factor activity
Dsui_2034	COG3449	Inhibits the supercoiling activity of DNA gyrase. Acts by inhibiting DNA gyrase at an early step, prior to (or at the step of) binding of DNA by the gyrase. It protects cells against toxins that target DNA gyrase, by inhibiting activity of these toxins and reducing the formation of lethal double-strand breaks in the cell
Dsui_2035	COG0583	DNA-binding transcription factor activity
Dsui_2040	COG1832	CoA-binding protein
Dsui_2041	COG1024	Enoyl-CoA hydratase
Dsui_2042	COG0626	cystathionine gamma-synthase activity
Dsui_2043	COG0031	Belongs to the cysteine synthase cystathionine beta- synthase family
Dsui_2049	COG4178	(ABC) transporter
Dsui_2053	COG1403	HNH endonuclease
Dsui_2058	COG0411	ABC transporter
Dsui_2060	COG0559	Belongs to the binding-protein-dependent transport system permease family
Dsui_2061	COG0683	leucine binding
Dsui_2062	COG0545	Peptidyl-prolyl cis-trans isomerase
Dsui_2067	COG2011	ABC-type metal ion transport system permease component
Dsui_2068	COG1135	Part of the ABC transporter complex MetNIQ involved in methionine import. Responsible for energy coupling to the transport system
Dsui_2071	COG1182	Catalyzes the reductive cleavage of azo bond in aromatic azo compounds to the corresponding amines. Requires NADH, but not NADPH, as an electron donor for its activity
Dsui_2075	COG0389	Poorly processive, error-prone DNA polymerase involved in untargeted mutagenesis. Copies undamaged DNA at stalled replication forks, which arise in vivo from mismatched or misaligned primer ends. These misaligned primers can be extended by PolIV. Exhibits no 3'-5' exonuclease (proofreading) activity. May be involved in translesional synthesis, in conjunction with the beta clamp from PolIII
Dsui_2078	COG4654	Cytochrome c, class I
Dsui_2079	COG4191	Histidine kinase
Dsui_2080	COG4566	intracellular signal transduction
Dsui_2081	COG1167	Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain MocR family and their eukaryotic orthologs
Dsui_2082	COG2128	Antioxidant protein with alkyl hydroperoxidase activity. Required for the reduction of the AhpC active site cysteine residues and for the regeneration of the AhpC enzyme activity
Dsui_2087	COG2863	cytochrome
Dsui_2088	COG3258	Cytochrome c
Dsui_2090	COG0583	DNA-binding transcription factor activity
Dsui_2097	COG1408	metallophosphoesterase
Dsui_2099	COG1595	DNA-templated transcription, initiation
Dsui_2111	COG0520	Catalyzes the removal of elemental sulfur and selenium atoms from L-cysteine, L-cystine, L-selenocysteine, and L- selenocystine to produce L-alanine
Dsui_2112	COG0664	- Catabolite gene activator and regulatory subunit of cAMP-dependent protein
Dsui_2113	COG1045	serine acetyltransferase
Dsui_2115	COG0583	DNA-binding transcription factor activity
Dsui_2116	COG1979	alcohol dehydrogenase
Dsui_2117	COG2057	Acyl CoA acetate 3-ketoacid CoA transferase beta subunit
Dsui_2121	COG1116	anion transmembrane transporter activity
Dsui_2122	COG0715	COG0715 ABC-type nitrate sulfonate bicarbonate transport systems periplasmic components
Dsui_2123	COG2199	diguanylate cyclase activity
Dsui_2123	COG3287	FIST C domain
Dsui_2123	COG2200	EAL domain
Dsui_2124	COG0840	transmembrane signaling receptor activity
Dsui_2126	COG0686	Belongs to the AlaDH PNT family
Dsui_2129	COG0776	regulation of translation
Dsui_2134	COG0527	aspartate kinase activity
Dsui_2137	COG0720	synthase
Dsui_2146	COG0776	regulation of translation
Dsui_2147	COG2974	May be involved in recombination
Dsui_2149	COG1199	ATP-dependent helicase activity
Dsui_2151	COG1763	Mo-molybdopterin cofactor biosynthetic process
Dsui_2152	COG0303	'Molybdopterin
Dsui_2153	COG1977	Involved in sulfur transfer in the conversion of molybdopterin precursor Z to molybdopterin
Dsui_2154	COG0314	molybdopterin synthase activity
Dsui_2156	COG0840	transmembrane signaling receptor activity
Dsui_2158	COG2197	response regulator
Dsui_2159	COG0840	transmembrane signaling receptor activity
Dsui_2161	COG0542	response to heat
Dsui_2168	COG2819	hydrolase of the alpha beta superfamily
Dsui_2172	COG1846	Transcriptional regulator
Dsui_2173	COG1764	response to oxidative stress
Dsui_2179	COG1853	conserved protein domain typically associated with flavoprotein oxygenases, DIM6 NTAB family
Dsui_2185	COG2818	Glycosylase
Dsui_2187	COG0365	Catalyzes the conversion of acetate into acetyl-CoA (AcCoA), an essential intermediate at the junction of anabolic and catabolic pathways. AcsA undergoes a two-step reaction. In the first half reaction, AcsA combines acetate with ATP to form acetyl-adenylate (AcAMP) intermediate. In the second half reaction, it can then transfer the acetyl group from AcAMP to the sulfhydryl group of CoA, forming the product AcCoA
Dsui_2192	COG1562	ergosterol biosynthetic process
Dsui_2193	COG1562	ergosterol biosynthetic process
Dsui_2195	COG0544	peptidyl-prolyl cis-trans isomerase activity
Dsui_2196	COG0740	serine-type endopeptidase activity
Dsui_2197	COG1219	ATP-dependent specificity component of the Clp protease. It directs the protease to specific substrates. Can perform chaperone functions in the absence of ClpP
Dsui_2198	COG0466	ATP-dependent serine protease that mediates the selective degradation of mutant and abnormal proteins as well as certain short-lived regulatory proteins. Required for cellular homeostasis and for survival from DNA damage and developmental changes induced by stress. Degrades polypeptides processively to yield small peptide fragments that are 5 to 10 amino acids long. Binds to DNA in a double-stranded, site-specific manner
Dsui_2202	COG0760	Chaperone involved in the correct folding and assembly of outer membrane proteins. Recognizes specific patterns of aromatic residues and the orientation of their side chains, which are found more frequently in integral outer membrane proteins. May act in both early periplasmic and late outer membrane-associated steps of protein maturation
Dsui_2209	COG0039	L-malate dehydrogenase activity
Dsui_2211	COG2009	succinate dehydrogenase
Dsui_2213	COG1053	succinate dehydrogenase
Dsui_2215	COG2938	An FAD assembly protein, which accelerates covalent attachment of the cofactor into other proteins. Plays an essential role in the assembly of succinate dehydrogenase (SDH, respiratory complex II), an enzyme complex that is a component of both the tricarboxylic acid cycle and the electron transport chain, and which couples the oxidation of succinate to fumarate with the reduction of ubiquinone (coenzyme Q) to ubiquinol. Required for flavinylation (covalent attachment of FAD) of the flavoprotein subunit SdhA of SDH
Dsui_2217	COG0567	Dehydrogenase, E1 component
Dsui_2218	COG0508	dehydrogenase complex catalyzes the overall conversion of
Dsui_2219	COG1249	Belongs to the class-I pyridine nucleotide-disulfide oxidoreductase family
Dsui_2221	COG1485	Reduces the stability of FtsZ polymers in the presence of ATP
Dsui_2223	COG1067	ATP-dependent peptidase activity
Dsui_2224	COG2832	Protein of unknown function (DUF454)
Dsui_2227	COG0377	NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient
Dsui_2229	COG0583	DNA-binding transcription factor activity
Dsui_2233	COG0376	Bifunctional enzyme with both catalase and broad- spectrum peroxidase activity
Dsui_2236	COG1173	ABC-type dipeptide oligopeptide nickel transport systems, permease components
Dsui_2237	COG0601	transmembrane transport
Dsui_2238	COG0747	negative chemotaxis
Dsui_2239	COG2265	Belongs to the class I-like SAM-binding methyltransferase superfamily. RNA M5U methyltransferase family
Dsui_2240	COG2205	protein histidine kinase activity
Dsui_2240	COG5002	protein histidine kinase activity
Dsui_2240	COG0784	Response regulator, receiver
Dsui_2244	COG0249	that it carries out the mismatch recognition step. This protein has a weak ATPase activity
Dsui_2248	COG0745	RESPONSE REGULATOR receiver
Dsui_2250	COG2206	PFAM metal-dependent phosphohydrolase, HD sub domain
Dsui_2253	COG3135	benzoate transporter
Dsui_2254	COG0112	Catalyzes the reversible interconversion of serine and glycine with tetrahydrofolate (THF) serving as the one-carbon carrier. This reaction serves as the major source of one-carbon groups required for the biosynthesis of purines, thymidylate, methionine, and other important biomolecules. Also exhibits THF- independent aldolase activity toward beta-hydroxyamino acids, producing glycine and aldehydes, via a retro-aldol mechanism
Dsui_2257	COG0583	DNA-binding transcription factor activity
Dsui_2265	COG0587	DNA-directed DNA polymerase activity
Dsui_2269	COG1974	Represses a number of genes involved in the response to DNA damage (SOS response), including recA and lexA. In the presence of single-stranded DNA, RecA interacts with LexA causing an autocatalytic cleavage which disrupts the DNA-binding part of LexA, leading to derepression of the SOS regulon and eventually DNA repair
Dsui_2275	COG3655	Transcriptional regulator
Dsui_2277	COG3501	Rhs element vgr protein
Dsui_2287	COG0308	aminopeptidase N
Dsui_2289	COG3008	intermembrane lipid transfer
Dsui_2289	COG1463	ABC-type transport system involved in resistance to organic solvents, periplasmic component
Dsui_2290	COG2995	paraquat-inducible protein a
Dsui_2293	COG3243	poly(R)-hydroxyalkanoic acid synthase
Dsui_2296	COG1871	Probably deamidates glutamine residues to glutamate on methyl-accepting chemotaxis receptors (MCPs), playing an important role in chemotaxis
Dsui_2297	COG0365	Catalyzes the conversion of acetate into acetyl-CoA (AcCoA), an essential intermediate at the junction of anabolic and catabolic pathways. AcsA undergoes a two-step reaction. In the first half reaction, AcsA combines acetate with ATP to form acetyl-adenylate (AcAMP) intermediate. In the second half reaction, it can then transfer the acetyl group from AcAMP to the sulfhydryl group of CoA, forming the product AcCoA
Dsui_2301	COG2200	EAL domain
Dsui_2302	COG1960	acyl-CoA dehydrogenase activity
Dsui_2306	COG1309	transcriptional regulator
Dsui_2307	COG4181	ATPase activity
Dsui_2309	COG0709	Synthesizes selenophosphate from selenide and ATP
Dsui_2310	COG2603	Catalyzes the transfer of selenium from selenophosphate for conversion of 2-thiouridine to 2-selenouridine at the wobble position in tRNA
Dsui_2311	COG1335	isochorismatase
Dsui_2312	COG1028	Short-chain dehydrogenase reductase Sdr
Dsui_2313	COG0504	CTP synthase activity
Dsui_2314	COG2877	3-deoxy-8-phosphooctulonate synthase activity
Dsui_2317	COG0148	phosphopyruvate hydratase activity
Dsui_2318	COG2919	Essential cell division protein. May link together the upstream cell division proteins, which are predominantly cytoplasmic, with the downstream cell division proteins, which are predominantly periplasmic
Dsui_2322	COG3022	response to hydroperoxide
Dsui_2325	COG3012	SEC-C Motif Domain Protein
Dsui_2330	COG1250	3-hydroxyacyl-CoA dehydrogenase
Dsui_2333	COG0035	Catalyzes the conversion of uracil and 5-phospho-alpha- D-ribose 1-diphosphate (PRPP) to UMP and diphosphate
Dsui_2334	COG0042	Catalyzes the synthesis of 5,6-dihydrouridine (D), a modified base found in the D-loop of most tRNAs, via the reduction of the C5-C6 double bond in target uridines
Dsui_2339	COG3434	signal transduction protein containing EAL and modified HD-GYP domains
Dsui_2340	COG0842	Transport permease protein
Dsui_2341	COG1131	(ABC) transporter
Dsui_2344	COG2501	S4 domain
Dsui_2347	COG1048	Catalyzes the isomerization of citrate to isocitrate via cis-aconitate
Dsui_2349	COG1236	Exonuclease of the beta-lactamase fold involved in RNA processing
Dsui_2350	COG0789	Transcriptional regulator
Dsui_2353	COG0583	DNA-binding transcription factor activity
Dsui_2354	COG3384	dioxygenase
Dsui_2355	COG3038	cytochrome b561
Dsui_2357	COG2353	YceI-like domain
Dsui_2358	COG2205	protein histidine kinase activity
Dsui_2360	COG2204	response regulator
Dsui_2370	COG1104	cysteine desulfurase activity
Dsui_2371	COG1104	cysteine desulfurase activity
Dsui_2372	COG0822	iron-sulfur transferase activity
Dsui_2374	COG1076	Co-chaperone involved in the maturation of iron-sulfur cluster-containing proteins. Seems to help targeting proteins to be folded toward HscA
Dsui_2375	COG0443	Heat shock 70 kDa protein
Dsui_2379	COG0560	Phosphoserine phosphatase
Dsui_2380	COG0663	COG0663 Carbonic anhydrases acetyltransferases, isoleucine patch superfamily
Dsui_2381	COG0722	Stereospecific condensation of phosphoenolpyruvate (PEP) and D-erythrose-4-phosphate (E4P) giving rise to 3-deoxy-D- arabino-heptulosonate-7-phosphate (DAHP)
Dsui_2385	COG1197	Couples transcription and DNA repair by recognizing RNA polymerase (RNAP) stalled at DNA lesions. Mediates ATP-dependent release of RNAP and its truncated transcript from the DNA, and recruitment of nucleotide excision repair machinery to the damaged site
Dsui_2388	COG1355	regulation of microtubule-based process
Dsui_2390	COG1211	2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase activity
Dsui_2391	COG0245	2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase activity
Dsui_2399	COG0671	phosphoesterase, PA-phosphatase related
Dsui_2401	COG0745	RESPONSE REGULATOR receiver
Dsui_2404	COG0456	acetyltransferase
Dsui_2405	COG1573	uracil-dna glycosylase
Dsui_2406	COG1704	LemA family
Dsui_2407	COG1512	COG1512 Beta-propeller domains of methanol dehydrogenase type
Dsui_2409	COG0477	Major facilitator Superfamily
Dsui_2410	COG0583	DNA-binding transcription factor activity
Dsui_2411	COG0787	Catalyzes the interconversion of L-alanine and D- alanine. May also act on other amino acids
Dsui_2412	COG5001	Diguanylate cyclase
Dsui_2415	COG3127	ABC-type transport system involved in lysophospholipase L1, biosynthesis, permease component
Dsui_2416	COG0846	NAD-dependent lysine deacetylase and desuccinylase that specifically removes acetyl and succinyl groups on target proteins. Modulates the activities of several proteins which are inactive in their acylated form
Dsui_2420	COG1032	radical SAM domain protein
Dsui_2421	COG3287	FIST C domain
Dsui_2421	COG2200	EAL domain
Dsui_2421	COG2199	diguanylate cyclase activity
Dsui_2427	COG2896	Catalyzes the cyclization of GTP to (8S)-3',8-cyclo-7,8- dihydroguanosine 5'-triphosphate
Dsui_2434	COG0556	nucleotide-excision repair
Dsui_2435	COG0394	Belongs to the low molecular weight phosphotyrosine protein phosphatase family
Dsui_2436	COG1530	ribonuclease E activity
Dsui_2440	COG0616	signal peptide processing
Dsui_2440	COG3004	Na( ) H( ) antiporter that extrudes sodium in exchange for external protons
Dsui_2441	COG0313	Catalyzes the 2'-O-methylation of the ribose of cytidine 1402 (C1402) in 16S rRNA
Dsui_2442	COG0424	maF-like protein
Dsui_2443	COG1399	metal-binding, possibly nucleic acid-binding protein
Dsui_2444	COG0333	Belongs to the bacterial ribosomal protein bL32 family
Dsui_2445	COG0416	fatty acid biosynthetic process
Dsui_2446	COG0332	Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP. Catalyzes the first condensation reaction which initiates fatty acid synthesis and may therefore play a role in governing the total rate of fatty acid production. Possesses both acetoacetyl-ACP synthase and acetyl transacylase activities. Its substrate specificity determines the biosynthesis of branched- chain and or straight-chain of fatty acids
Dsui_2449	COG0236	Carrier of the growing fatty acid chain in fatty acid biosynthesis
Dsui_2450	COG0304	beta-ketoacyl-acyl-carrier-protein synthase II activity
Dsui_2452	COG0029	Catalyzes the oxidation of L-aspartate to iminoaspartate
Dsui_2453	COG1595	DNA-templated transcription, initiation
Dsui_2454	COG3086	response to oxidative stress
Dsui_2455	COG0265	Trypsin-like serine proteases, typically periplasmic, contain C-terminal PDZ domain
Dsui_2457	COG0481	GTPase activity
Dsui_2458	COG0681	Belongs to the peptidase S26 family
Dsui_2460	COG0571	ribonuclease III activity
Dsui_2461	COG1159	An essential GTPase that binds both GDP and GTP, with rapid nucleotide exchange. Plays a role in 16S rRNA processing and 30S ribosomal subunit biogenesis and possibly also in cell cycle regulation and energy metabolism
Dsui_2462	COG1381	Involved in DNA repair and RecF pathway recombination
Dsui_2463	COG0854	Catalyzes the complicated ring closure reaction between the two acyclic compounds 1-deoxy-D-xylulose-5-phosphate (DXP) and 3-amino-2-oxopropyl phosphate (1-amino-acetone-3-phosphate or AAP) to form pyridoxine 5'-phosphate (PNP) and inorganic phosphate
Dsui_2464	COG0736	holo-[acyl-carrier-protein] synthase activity
Dsui_2465	COG1472	Belongs to the glycosyl hydrolase 3 family
Dsui_2466	COG1793	dna ligase
Dsui_2467	COG0231	Involved in peptide bond synthesis. Stimulates efficient translation and peptide-bond synthesis on native or reconstituted 70S ribosomes in vitro. Probably functions indirectly by altering the affinity of the ribosome for aminoacyl-tRNA, thus increasing their reactivity as acceptors for peptidyl transferase
Dsui_2470	COG0322	excinuclease ABC activity
Dsui_2481	COG0847	DNA polymerase III is a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria. The epsilon subunit contain the editing function and is a proofreading 3'-5' exonuclease
Dsui_2482	COG0328	RNA-DNA hybrid ribonuclease activity
Dsui_2483	COG2226	methyltransferase
Dsui_2484	COG0491	Thiolesterase that catalyzes the hydrolysis of S-D- lactoyl-glutathione to form glutathione and D-lactic acid
Dsui_2485	COG2201	protein-glutamate methylesterase activity
Dsui_2486	COG2203	Gaf domain
Dsui_2486	COG3706	GGDEF domain
Dsui_2486	COG4251	negative regulation of phosphorylation
Dsui_2486	COG5001	Diguanylate cyclase
Dsui_2487	COG1322	Protein conserved in bacteria
Dsui_2490	COG0515	serine threonine protein kinase
Dsui_2490	COG2815	serine threonine protein kinase
Dsui_2492	COG1961	COG1961 Site-specific recombinases, DNA invertase Pin homologs
Dsui_2498	COG0789	Transcriptional regulator
Dsui_2500	COG1961	COG1961 Site-specific recombinases, DNA invertase Pin homologs
Dsui_2506	COG2826	transposase and inactivated derivatives, IS30 family
Dsui_2511	COG4566	intracellular signal transduction
Dsui_2512	COG4191	Histidine kinase
Dsui_2521	COG0031	Belongs to the cysteine synthase cystathionine beta- synthase family
Dsui_2526	COG1961	COG1961 Site-specific recombinases, DNA invertase Pin homologs
Dsui_2528	COG0515	serine threonine protein kinase
Dsui_2528	COG2815	serine threonine protein kinase
Dsui_2530	COG0564	pseudouridine synthase activity
Dsui_2532	COG1638	TRAP-type C4-dicarboxylate transport system periplasmic component
Dsui_2533	COG3090	Trap-type c4-dicarboxylate transport system, small permease component
Dsui_2537	COG3243	poly(R)-hydroxyalkanoic acid synthase
Dsui_2539	COG5394	Polyhydroxyalkanoate synthesis repressor PhaR
Dsui_2540	COG0621	Catalyzes the methylthiolation of N6- (dimethylallyl)adenosine (i(6)A), leading to the formation of 2- methylthio-N6-(dimethylallyl)adenosine (ms(2)i(6)A) at position 37 in tRNAs that read codons beginning with uridine
Dsui_2541	COG1752	Esterase of the alpha-beta hydrolase superfamily
Dsui_2542	COG0277	FAD linked oxidase domain protein
Dsui_2544	COG1281	Redox regulated molecular chaperone. Protects both thermally unfolding and oxidatively damaged proteins from irreversible aggregation. Plays an important role in the bacterial defense system toward oxidative stress
Dsui_2545	COG1393	Belongs to the ArsC family
Dsui_2546	COG2183	response to ionizing radiation
Dsui_2547	COG3300	MHYT domain
Dsui_2547	COG5001	Diguanylate cyclase
Dsui_2548	COG1699	Binds to the C-terminal region of flagellin, which is implicated in polymerization, and participates in the assembly of the flagellum
Dsui_2591	COG2804	Type II secretory pathway, ATPase PulE Tfp pilus assembly pathway, ATPase PilB
Dsui_2594	COG2804	Type II secretory pathway, ATPase PulE Tfp pilus assembly pathway, ATPase PilB
Dsui_2605	COG3300	MHYT domain
Dsui_2605	COG5001	Diguanylate cyclase
Dsui_2617	COG2974	May be involved in recombination
Dsui_2621	COG2894	cell division
Dsui_2630	COG1815	bacterial-type flagellum-dependent cell motility
Dsui_2635	COG3696	Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family
Dsui_2636	COG0845	Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family
Dsui_2645	COG5002	protein histidine kinase activity
Dsui_2649	COG4644	lycopene metabolic process
Dsui_2650	COG4663	Part of the tripartite ATP-independent periplasmic (TRAP) transport system
Dsui_2652	COG0084	hydrolase, TatD family'
Dsui_2655	COG0125	Phosphorylation of dTMP to form dTDP in both de novo and salvage pathways of dTTP synthesis
Dsui_2656	COG1559	Functions as a peptidoglycan terminase that cleaves nascent peptidoglycan strands endolytically to terminate their elongation
Dsui_2659	COG1278	Cold shock
Dsui_2661	COG0590	tRNA wobble adenosine to inosine editing
Dsui_2665	COG0702	epimerase
Dsui_2666	COG1733	regulation of RNA biosynthetic process
Dsui_2670	COG0519	Catalyzes the synthesis of GMP from XMP
Dsui_2670	COG0518	GMP synthase (glutamine-hydrolyzing) activity
Dsui_2673	COG2914	Belongs to the UPF0125 (RnfH) family
Dsui_2674	COG2867	negative regulation of translational initiation
Dsui_2675	COG0691	Required for rescue of stalled ribosomes mediated by trans-translation. Binds to transfer-messenger RNA (tmRNA), required for stable association of tmRNA with ribosomes. tmRNA and SmpB together mimic tRNA shape, replacing the anticodon stem-loop with SmpB. tmRNA is encoded by the ssrA gene
Dsui_2676	COG2860	membrane
Dsui_2678	COG1806	Bifunctional serine threonine kinase and phosphorylase involved in the regulation of the
Dsui_2679	COG0566	Belongs to the class IV-like SAM-binding methyltransferase superfamily. RNA methyltransferase TrmH family
Dsui_2680	COG0164	Endonuclease that specifically degrades the RNA of RNA- DNA hybrids
Dsui_2681	COG0763	Condensation of UDP-2,3-diacylglucosamine and 2,3- diacylglucosamine-1-phosphate to form lipid A disaccharide, a precursor of lipid A, a phosphorylated glycolipid that anchors the lipopolysaccharide to the outer membrane of the cell
Dsui_2682	COG1043	involved in the biosynthesis of lipid A, a phosphorylated glycolipid that anchors the lipopolysaccharide to the outer membrane of the cell
Dsui_2683	COG0764	3-hydroxyoctanoyl-[acyl-carrier-protein] dehydratase activity
Dsui_2684	COG1044	Catalyzes the N-acylation of UDP-3-O-acylglucosamine using 3-hydroxyacyl-ACP as the acyl donor. Is involved in the biosynthesis of lipid A, a phosphorylated glycolipid that anchors the lipopolysaccharide to the outer membrane of the cell
Dsui_2688	COG0743	1-deoxy-D-xylulose-5-phosphate reductoisomerase activity
Dsui_2689	COG0575	Belongs to the CDS family
Dsui_2690	COG0020	Catalyzes the condensation of isopentenyl diphosphate (IPP) with allylic pyrophosphates generating different type of terpenoids
Dsui_2691	COG0233	cytoplasmic translational termination
Dsui_2692	COG0528	UMP kinase activity
Dsui_2693	COG0264	Associates with the EF-Tu.GDP complex and induces the exchange of GDP to GTP. It remains bound to the aminoacyl-tRNA.EF- Tu.GTP complex up to the GTP hydrolysis stage on the ribosome
Dsui_2694	COG0052	Belongs to the universal ribosomal protein uS2 family
Dsui_2695	COG0024	Methionine aminopeptidase
Dsui_2696	COG2844	Modifies, by uridylylation and deuridylylation, the PII regulatory proteins (GlnB and homologs), in response to the nitrogen status of the cell that GlnD senses through the glutamine level. Under low glutamine levels, catalyzes the conversion of the PII proteins and UTP to PII-UMP and PPi, while under higher glutamine levels, GlnD hydrolyzes PII-UMP to PII and UMP (deuridylylation). Thus, controls uridylylation state and activity of the PII proteins, and plays an important role in the regulation of nitrogen
Dsui_2697	COG0242	peptide deformylase activity
Dsui_2700	COG1210	Utp--glucose-1-phosphate uridylyltransferase
Dsui_2701	COG0272	DNA ligase that catalyzes the formation of phosphodiester linkages between 5'-phosphoryl and 3'-hydroxyl groups in double-stranded DNA using NAD as a coenzyme and as the energy source for the reaction. It is essential for DNA replication and repair of damaged DNA
Dsui_2704	COG3318	Belongs to the UPF0149 family
Dsui_2704	COG3012	SEC-C Motif Domain Protein
Dsui_2705	COG2252	PERMEase
Dsui_2706	COG0503	Catalyzes a salvage reaction resulting in the formation of AMP, that is energically less costly than de novo synthesis
Dsui_2708	COG0436	Aminotransferase
Dsui_2709	COG2171	N-acyltransferase activity
Dsui_2711	COG0624	Catalyzes the hydrolysis of N-succinyl-L,L- diaminopimelic acid (SDAP), forming succinate and LL-2,6- diaminoheptanedioate (DAP), an intermediate involved in the bacterial biosynthesis of lysine and meso-diaminopimelic acid, an essential component of bacterial cell walls
Dsui_2713	COG0330	HflC and HflK could
Dsui_2717	COG1734	Transcription factor that acts by binding directly to the RNA polymerase (RNAP). Required for negative regulation of rRNA expression and positive regulation of several amino acid biosynthesis promoters
Dsui_2718	COG1185	polyribonucleotide nucleotidyltransferase activity
Dsui_2719	COG0184	Forms an intersubunit bridge (bridge B4) with the 23S rRNA of the 50S subunit in the ribosome
Dsui_2720	COG0130	Responsible for synthesis of pseudouridine from uracil- 55 in the psi GC loop of transfer RNAs
Dsui_2721	COG0858	One of several proteins that assist in the late maturation steps of the functional core of the 30S ribosomal subunit. Associates with free 30S ribosomal subunits (but not with 30S subunits that are part of 70S ribosomes or polysomes). Required for efficient processing of 16S rRNA. May interact with the 5'-terminal helix region of 16S rRNA
Dsui_2722	COG0532	One of the essential components for the initiation of protein synthesis. Protects formylmethionyl-tRNA from spontaneous hydrolysis and promotes its binding to the 30S ribosomal subunits. Also involved in the hydrolysis of GTP during the formation of the 70S ribosomal complex
Dsui_2723	COG2251	uridine kinase activity
Dsui_2723	COG0195	Participates in both transcription termination and antitermination
Dsui_2724	COG0779	Required for maturation of 30S ribosomal subunits
Dsui_2725	COG1187	pseudouridine synthase activity
Dsui_2726	COG1386	Participates in chromosomal partition during cell division. May act via the formation of a condensin-like complex containing Smc and ScpA that pull DNA away from mid-cell into both cell halves
Dsui_2727	COG1354	Participates in chromosomal partition during cell division. May act via the formation of a condensin-like complex containing Smc and ScpB that pull DNA away from mid-cell into both cell halves
Dsui_2728	COG0180	Tryptophanyl-tRNA synthetase
Dsui_2729	COG1994	Peptidase M50
Dsui_2730	COG0009	L-threonylcarbamoyladenylate synthase
Dsui_2731	COG0613	PHP domain protein
Dsui_2735	COG0404	The glycine cleavage system catalyzes the degradation of glycine
Dsui_2736	COG0509	glycine decarboxylation via glycine cleavage system
Dsui_2737	COG0403	The glycine cleavage system catalyzes the degradation of glycine. The P protein binds the alpha-amino group of glycine through its pyridoxal phosphate cofactor
Dsui_2737	COG1003	The glycine cleavage system catalyzes the degradation of glycine. The P protein binds the alpha-amino group of glycine through its pyridoxal phosphate cofactor
Dsui_2739	COG0508	dehydrogenase complex catalyzes the overall conversion of
Dsui_2742	COG0443	Heat shock 70 kDa protein
Dsui_2746	COG0488	(ABC) transporter
Dsui_2747	COG3739	integral membrane protein
Dsui_2752	COG1132	(ABC) transporter
Dsui_2754	COG0826	peptidase U32
Dsui_2757	COG0421	Catalyzes the irreversible transfer of a propylamine group from the amino donor S-adenosylmethioninamine (decarboxy- AdoMet) to putrescine (1,4-diaminobutane) to yield spermidine
Dsui_2759	COG1187	pseudouridine synthase activity
Dsui_2760	COG0361	One of the essential components for the initiation of protein synthesis. Stabilizes the binding of IF-2 and IF-3 on the 30S subunit to which N-formylmethionyl-tRNA(fMet) subsequently binds. Helps modulate mRNA selection, yielding the 30S pre- initiation complex (PIC). Upon addition of the 50S ribosomal subunit IF-1, IF-2 and IF-3 are released leaving the mature 70S translation initation complex
Dsui_2763	COG1161	Required for a late step of 50S ribosomal subunit assembly. Has GTPase activity
Dsui_2770	COG5009	serine-type D-Ala-D-Ala carboxypeptidase activity
Dsui_2771	COG4681	YaeQ
Dsui_2775	COG3124	Converts holo-ACP to apo-ACP by hydrolytic cleavage of the phosphopantetheine prosthetic group from ACP
Dsui_2777	COG2195	Cleaves the N-terminal amino acid of tripeptides
Dsui_2779	COG0642	Histidine kinase
Dsui_2780	COG0784	Response regulator, receiver
Dsui_2783	COG2205	protein histidine kinase activity
Dsui_2783	COG0784	Response regulator, receiver
Dsui_2786	COG0187	DNA topoisomerase II activity
Dsui_2787	COG0744	Peptidoglycan polymerase that catalyzes glycan chain elongation from lipid-linked precursors
Dsui_2789	COG0008	Catalyzes the attachment of glutamate to tRNA(Glu) in a two-step reaction glutamate is first activated by ATP to form Glu-AMP and then transferred to the acceptor end of tRNA(Glu)
Dsui_2796	COG0846	NAD-dependent lysine deacetylase and desuccinylase that specifically removes acetyl and succinyl groups on target proteins. Modulates the activities of several proteins which are inactive in their acylated form
Dsui_2797	COG1388	LysM domain
Dsui_2797	COG0741	lytic transglycosylase activity
Dsui_2798	COG2814	Major facilitator Superfamily
Dsui_2800	COG1173	ABC-type dipeptide oligopeptide nickel transport systems, permease components
Dsui_2801	COG0601	transmembrane transport
Dsui_2806	COG4191	Histidine kinase
Dsui_2807	COG1024	Enoyl-CoA hydratase
Dsui_2808	COG0318	PFAM AMP-dependent synthetase and ligase
Dsui_2811	COG1127	ABC transporter
Dsui_2812	COG0767	ABC-type transport system involved in resistance to organic solvents, permease component
Dsui_2813	COG0248	Ppx GppA phosphatase
Dsui_2814	COG0855	Catalyzes the reversible transfer of the terminal phosphate of ATP to form a long-chain polyphosphate (polyP)
Dsui_2815	COG0431	NADPH-dependent FMN reductase
Dsui_2816	COG0317	In eubacteria ppGpp (guanosine 3'-diphosphate 5-' diphosphate) is a mediator of the stringent response that coordinates a variety of cellular activities in response to changes in nutritional abundance
Dsui_2818	COG3228	Belongs to the MtfA family
Dsui_2820	COG0596	Alpha beta hydrolase
Dsui_2821	COG1226	(belongs to the monovalent cation proton antiporter 2 (CPA2) transporter (TC 2.A.37) family)
Dsui_2852	COG3210	domain, Protein
Dsui_2856	COG0840	transmembrane signaling receptor activity
Dsui_2857	COG1136	(ABC) transporter
Dsui_2860	COG0608	single-stranded DNA 5'-3' exodeoxyribonuclease activity
Dsui_2861	COG0697	spore germination
Dsui_2863	COG1190	Belongs to the class-II aminoacyl-tRNA synthetase family
Dsui_2864	COG5002	protein histidine kinase activity
Dsui_2864	COG0784	Response regulator, receiver
Dsui_2864	COG2205	protein histidine kinase activity
Dsui_2868	COG4121	Catalyzes the last two steps in the biosynthesis of 5- methylaminomethyl-2-thiouridine (mnm(5)s(2)U) at the wobble position (U34) in tRNA. Catalyzes the FAD-dependent demodification of cmnm(5)s(2)U34 to nm(5)s(2)U34, followed by the transfer of a methyl group from S-adenosyl-L-methionine to nm(5)s(2)U34, to form mnm(5)s(2)U34
Dsui_2868	COG0665	tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase activity
Dsui_2869	COG0583	DNA-binding transcription factor activity
Dsui_2873	COG1225	Alkyl hydroperoxide reductase Thiol specific antioxidant Mal allergen
Dsui_2876	COG0845	Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family
Dsui_2877	COG1136	(ABC) transporter
Dsui_2877	COG0577	efflux transmembrane transporter activity
Dsui_2878	COG0577	efflux transmembrane transporter activity
Dsui_2878	COG1136	(ABC) transporter
Dsui_2879	COG0840	transmembrane signaling receptor activity
Dsui_2881	COG0156	8-amino-7-oxononanoate synthase activity
Dsui_2882	COG2267	carboxylic ester hydrolase activity
Dsui_2883	COG2226	methyltransferase
Dsui_2884	COG0132	Catalyzes a mechanistically unusual reaction, the ATP- dependent insertion of CO2 between the N7 and N8 nitrogen atoms of 7,8-diaminopelargonic acid (DAPA) to form an ureido ring
Dsui_2886	COG2917	probably involved in intracellular septation
Dsui_2887	COG2350	Protein conserved in bacteria
Dsui_2889	COG0760	Chaperone involved in the correct folding and assembly of outer membrane proteins. Recognizes specific patterns of aromatic residues and the orientation of their side chains, which are found more frequently in integral outer membrane proteins. May act in both early periplasmic and late outer membrane-associated steps of protein maturation
Dsui_2890	COG2200	EAL domain
Dsui_2892	COG0047	phosphoribosylformylglycinamidine synthase activity
Dsui_2892	COG0046	Part of the phosphoribosylformylglycinamidine synthase complex involved in the purines biosynthetic pathway. Catalyzes the ATP-dependent conversion of formylglycinamide ribonucleotide (FGAR) and glutamine to yield formylglycinamidine ribonucleotide (FGAM) and glutamate. The FGAM synthase complex is composed of three subunits. PurQ produces an ammonia molecule by converting glutamine to glutamate. PurL transfers the ammonia molecule to FGAR to form FGAM in an ATP-dependent manner. PurS interacts with PurQ and PurL and is thought to assist in the transfer of the ammonia molecule from PurQ to PurL
Dsui_2893	COG3706	GGDEF domain
Dsui_2894	COG5001	Diguanylate cyclase
Dsui_2894	COG5002	protein histidine kinase activity
Dsui_2898	COG0063	ADP-dependent NAD(P)H-hydrate dehydratase activity
Dsui_2898	COG0062	Bifunctional enzyme that catalyzes the epimerization of the S- and R-forms of NAD(P)HX and the dehydration of the S-form of NAD(P)HX at the expense of ADP, which is converted to AMP. This allows the repair of both epimers of NAD(P)HX, a damaged form of NAD(P)H that is a result of enzymatic or heat-dependent hydration
Dsui_2900	COG0069	glutamate synthase activity
Dsui_2903	COG2890	protein-(glutamine-N5) methyltransferase activity
Dsui_2908	COG0436	Aminotransferase
Dsui_2909	COG0436	Aminotransferase
Dsui_2911	COG2076	Multidrug Resistance protein
Dsui_2914	COG1969	Ni Fe-hydrogenase, b-type cytochrome subunit
Dsui_2921	COG1169	isochorismate synthase
Dsui_2922	COG1165	Catalyzes the thiamine diphosphate-dependent decarboxylation of 2-oxoglutarate and the subsequent addition of the resulting succinic semialdehyde-thiamine pyrophosphate anion to isochorismate to yield 2-succinyl-5-enolpyruvyl-6-hydroxy-3- cyclohexene-1-carboxylate (SEPHCHC)
Dsui_2925	COG0365	Catalyzes the conversion of acetate into acetyl-CoA (AcCoA), an essential intermediate at the junction of anabolic and catabolic pathways. AcsA undergoes a two-step reaction. In the first half reaction, AcsA combines acetate with ATP to form acetyl-adenylate (AcAMP) intermediate. In the second half reaction, it can then transfer the acetyl group from AcAMP to the sulfhydryl group of CoA, forming the product AcCoA
Dsui_2927	COG0791	NLP P60 protein
Dsui_2928	COG1840	ABC-type Fe3 transport system, periplasmic component
Dsui_2935	COG3288	NAD(P)+ transhydrogenase (AB-specific) activity
Dsui_2936	COG3288	NAD(P)+ transhydrogenase (AB-specific) activity
Dsui_2937	COG1282	The transhydrogenation between NADH and NADP is coupled to respiration and ATP hydrolysis and functions as a proton pump across the membrane
Dsui_2942	COG1178	ABC-type Fe3 transport system permease component
Dsui_2943	COG3842	ATPase activity
Dsui_2944	COG3706	GGDEF domain
Dsui_2944	COG0745	RESPONSE REGULATOR receiver
Dsui_2946	COG0513	Belongs to the DEAD box helicase family
Dsui_2947	COG1451	nucleotide metabolic process
Dsui_2948	COG1595	DNA-templated transcription, initiation
Dsui_2949	COG3712	iron ion homeostasis
Dsui_2950	COG4774	siderophore transport
Dsui_2953	COG3706	GGDEF domain
Dsui_2955	COG0310	cobalt ion transport
Dsui_2958	COG1122	ATPase activity
Dsui_2962	COG1903	Catalyzes the methylation of C-1 in cobalt-precorrin-5B to form cobalt-precorrin-6A
Dsui_2969	COG0007	Multifunctional enzyme that catalyzes the SAM-dependent methylations of uroporphyrinogen III at position C-2 and C-7 to form precorrin-2 via precorrin-1. Then it catalyzes the NAD- dependent ring dehydrogenation of precorrin-2 to yield sirohydrochlorin. Finally, it catalyzes the ferrochelation of sirohydrochlorin to yield siroheme
Dsui_2969	COG1648	precorrin-2 dehydrogenase activity
Dsui_2971	COG1752	Esterase of the alpha-beta hydrolase superfamily
Dsui_2972	COG2360	Functions in the N-end rule pathway of protein degradation where it conjugates Leu, Phe and, less efficiently, Met from aminoacyl-tRNAs to the N-termini of proteins containing an N-terminal arginine or lysine
Dsui_2973	COG2935	proteasome-mediated ubiquitin-dependent protein catabolic process
Dsui_2977	COG1595	DNA-templated transcription, initiation
Dsui_2978	COG0167	dihydroorotate dehydrogenase activity
Dsui_2979	COG4657	Part of a membrane complex involved in electron transport
Dsui_2980	COG2878	Part of a membrane complex involved in electron transport
Dsui_2985	COG0177	DNA repair enzyme that has both DNA N-glycosylase activity and AP-lyase activity. The DNA N-glycosylase activity releases various damaged pyrimidines from DNA by cleaving the N- glycosidic bond, leaving an AP (apurinic apyrimidinic) site. The AP-lyase activity cleaves the phosphodiester bond 3' to the AP site by a beta-elimination, leaving a 3'-terminal unsaturated sugar and a product with a terminal 5'-phosphate
Dsui_2989	COG0840	transmembrane signaling receptor activity
Dsui_2990	COG0465	Acts as a processive, ATP-dependent zinc metallopeptidase for both cytoplasmic and membrane proteins. Plays a role in the quality control of integral membrane proteins
Dsui_2991	COG0745	RESPONSE REGULATOR receiver
Dsui_2991	COG3706	GGDEF domain
Dsui_2994	COG0406	alpha-ribazole phosphatase activity
Dsui_2996	COG2804	Type II secretory pathway, ATPase PulE Tfp pilus assembly pathway, ATPase PilB
Dsui_2999	COG4191	Histidine kinase
Dsui_3002	COG4191	Histidine kinase
Dsui_3003	COG0326	Molecular chaperone. Has ATPase activity
Dsui_3004	COG3706	GGDEF domain
Dsui_3004	COG0745	RESPONSE REGULATOR receiver
Dsui_3008	COG0680	Initiates the rapid degradation of small, acid-soluble proteins during spore germination
Dsui_3009	COG0374	Belongs to the NiFe NiFeSe hydrogenase large subunit family
Dsui_3010	COG5557	Pfam Polysulphide reductase, NrfD
Dsui_3011	COG0437	4 iron, 4 sulfur cluster binding
Dsui_3012	COG1740	oxidoreductase activity, acting on hydrogen as donor, iron-sulfur protein as acceptor
Dsui_3019	COG2267	carboxylic ester hydrolase activity
Dsui_3023	COG0306	phosphate transporter
Dsui_3027	COG3259	Nickel-dependent hydrogenase
Dsui_3028	COG1941	NADH ubiquinone oxidoreductase 20 kDa subunit
Dsui_3029	COG3383	formate dehydrogenase (NAD+) activity
Dsui_3030	COG1894	NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain
Dsui_3031	COG0623	enoyl-[acyl-carrier-protein] reductase (NADH) activity
Dsui_3033	COG0282	Catalyzes the formation of acetyl phosphate from acetate and ATP. Can also catalyze the reverse reaction
Dsui_3034	COG0209	Provides the precursors necessary for DNA synthesis. Catalyzes the biosynthesis of deoxyribonucleotides from the corresponding ribonucleotides
Dsui_3035	COG3706	GGDEF domain
Dsui_3036	COG0494	nUDIX hydrolase
Dsui_3037	COG1007	ATP synthesis coupled electron transport
Dsui_3040	COG0713	ATP synthesis coupled electron transport
Dsui_3042	COG1143	NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient
Dsui_3043	COG1005	NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient. This subunit may bind ubiquinone
Dsui_3044	COG1034	ATP synthesis coupled electron transport
Dsui_3046	COG1905	PFAM NADH dehydrogenase (ubiquinone) 24 kDa subunit
Dsui_3047	COG0649	NAD binding
Dsui_3048	COG0852	NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient
Dsui_3049	COG0377	NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient
Dsui_3050	COG0838	NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient
Dsui_3052	COG0149	triose-phosphate isomerase activity
Dsui_3053	COG1117	ATPase-coupled phosphate ion transmembrane transporter activity
Dsui_3055	COG0573	inorganic phosphate transmembrane transporter activity
Dsui_3056	COG0226	Part of the ABC transporter complex PstSACB involved in phosphate import
Dsui_3057	COG1109	Catalyzes the conversion of glucosamine-6-phosphate to glucosamine-1-phosphate
Dsui_3059	COG0465	Acts as a processive, ATP-dependent zinc metallopeptidase for both cytoplasmic and membrane proteins. Plays a role in the quality control of integral membrane proteins
Dsui_3060	COG0293	Specifically methylates the uridine in position 2552 of 23S rRNA at the 2'-O position of the ribose in the fully assembled 50S ribosomal subunit
Dsui_3061	COG1534	Rna-binding protein
Dsui_3063	COG0782	Necessary for efficient RNA polymerase transcription elongation past template-encoded arresting sites. The arresting sites in DNA have the property of trapping a certain fraction of elongating RNA polymerases that pass through, resulting in locked ternary complexes. Cleavage of the nascent transcript by cleavage factors such as GreA or GreB allows the resumption of elongation from the new 3'terminus
Dsui_3064	COG0458	carbamoyl-phosphate synthase (glutamine-hydrolyzing) activity
Dsui_3065	COG0505	Belongs to the CarA family
Dsui_3066	COG0289	4-hydroxy-tetrahydrodipicolinate reductase
Dsui_3067	COG2913	Part of the outer membrane protein assembly complex, which is involved in assembly and insertion of beta-barrel proteins into the outer membrane
Dsui_3068	COG0735	belongs to the Fur family
Dsui_3069	COG2119	membrane
Dsui_3072	COG0497	DNA recombination
Dsui_3073	COG0061	Involved in the regulation of the intracellular balance of NAD and NADP, and is a key enzyme in the biosynthesis of NADP. Catalyzes specifically the phosphorylation on 2'-hydroxyl of the adenosine moiety of NAD to yield NADP
Dsui_3074	COG1420	regulation of RNA biosynthetic process
Dsui_3075	COG0276	Catalyzes the ferrous insertion into protoporphyrin IX
Dsui_3078	COG0840	transmembrane signaling receptor activity
Dsui_3079	COG2815	serine threonine protein kinase
Dsui_3079	COG0515	serine threonine protein kinase
Dsui_3080	COG0576	Participates actively in the response to hyperosmotic and heat shock by preventing the aggregation of stress-denatured proteins, in association with DnaK and GrpE. It is the nucleotide exchange factor for DnaK and may function as a thermosensor. Unfolded proteins bind initially to DnaJ
Dsui_3081	COG0443	Heat shock 70 kDa protein
Dsui_3082	COG0484	heat shock protein binding
Dsui_3084	COG0215	cysteine-tRNA ligase activity
Dsui_3089	COG2908	Hydrolyzes the pyrophosphate bond of UDP-2,3- diacylglucosamine to yield 2,3-diacylglucosamine 1-phosphate (lipid X) and UMP by catalyzing the attack of water at the alpha-P atom. Involved in the biosynthesis of lipid A, a phosphorylated glycolipid that anchors the lipopolysaccharide to the outer membrane of the cell
Dsui_3091	COG0861	Integral membrane protein TerC family
Dsui_3092	COG0514	ATP-dependent DNA helicase (RecQ)
Dsui_3094	COG1418	mRNA catabolic process
Dsui_3097	COG0350	Involved in the cellular defense against the biological effects of O6-methylguanine (O6-MeG) and O4-methylthymine (O4-MeT) in DNA. Repairs the methylated nucleobase in DNA by stoichiometrically transferring the methyl group to a cysteine residue in the enzyme. This is a suicide reaction the enzyme is irreversibly inactivated
Dsui_3097	COG2169	Transcriptional regulator
Dsui_3098	COG3145	DNA-N1-methyladenine dioxygenase activity
Dsui_3101	COG0583	DNA-binding transcription factor activity
Dsui_3102	COG0746	molybdenum cofactor guanylyltransferase activity
Dsui_3105	COG1253	flavin adenine dinucleotide binding
Dsui_3107	COG0491	Thiolesterase that catalyzes the hydrolysis of S-D- lactoyl-glutathione to form glutathione and D-lactic acid
Dsui_3108	COG3300	MHYT domain
Dsui_3108	COG5001	Diguanylate cyclase
Dsui_3109	COG2010	Cytochrome c
Dsui_3114	COG1845	cytochrome c oxidase, subunit III
Dsui_3122	COG0840	transmembrane signaling receptor activity
Dsui_3123	COG0840	transmembrane signaling receptor activity
Dsui_3124	COG0745	RESPONSE REGULATOR receiver
Dsui_3128	COG0557	exoribonuclease II activity
Dsui_3131	COG0104	Plays an important role in the de novo pathway of purine nucleotide biosynthesis. Catalyzes the first committed step in the biosynthesis of AMP from IMP
Dsui_3132	COG3705	Required for the first step of histidine biosynthesis. May allow the feedback regulation of ATP phosphoribosyltransferase activity by histidine
Dsui_3134	COG0330	HflC and HflK could
Dsui_3135	COG0330	HflC and HflK could
Dsui_3136	COG2262	GTPase that associates with the 50S ribosomal subunit and may have a role during protein synthesis or ribosome biogenesis
Dsui_3137	COG1923	regulation of RNA biosynthetic process
Dsui_3138	COG1160	GTP binding
Dsui_3139	COG1520	Part of the outer membrane protein assembly complex, which is involved in assembly and insertion of beta-barrel proteins into the outer membrane
Dsui_3141	COG0124	histidyl-tRNA synthetase
Dsui_3142	COG0821	Converts 2C-methyl-D-erythritol 2,4-cyclodiphosphate (ME-2,4cPP) into 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate
Dsui_3145	COG0820	rRNA (adenine-C2-)-methyltransferase activity
Dsui_3146	COG0105	UTP biosynthetic process
Dsui_3148	COG0644	oxidoreductase
Dsui_3151	COG0745	RESPONSE REGULATOR receiver
Dsui_3152	COG2205	protein histidine kinase activity
Dsui_3158	COG1301	dicarboxylic acid transport
Dsui_3164	COG0745	RESPONSE REGULATOR receiver
Dsui_3164	COG3706	GGDEF domain
Dsui_3165	COG0037	tRNA processing
Dsui_3166	COG0825	malonyl-CoA metabolic process
Dsui_3167	COG5001	Diguanylate cyclase
Dsui_3167	COG3300	MHYT domain
Dsui_3173	COG0583	DNA-binding transcription factor activity
Dsui_3174	COG0513	Belongs to the DEAD box helicase family
Dsui_3177	COG1136	(ABC) transporter
Dsui_3177	COG0577	efflux transmembrane transporter activity
Dsui_3178	COG0577	efflux transmembrane transporter activity
Dsui_3178	COG1136	(ABC) transporter
Dsui_3179	COG2205	protein histidine kinase activity
Dsui_3180	COG0745	RESPONSE REGULATOR receiver
Dsui_3181	COG0845	Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family
Dsui_3182	COG0841	Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family
Dsui_3183	COG1538	Outer membrane efflux protein
Dsui_3189	COG0285	dihydrofolate synthase activity
Dsui_3190	COG0777	Component of the acetyl coenzyme A carboxylase (ACC) complex. Biotin carboxylase (BC) catalyzes the carboxylation of biotin on its carrier protein (BCCP) and then the CO(2) group is transferred by the transcarboxylase to acetyl-CoA to form malonyl- CoA
Dsui_3191	COG0159	tryptophan synthase activity
Dsui_3192	COG0133	tryptophan synthase activity
Dsui_3193	COG0135	phosphoribosylanthranilate isomerase activity
Dsui_3194	COG0101	tRNA pseudouridine synthase activity
Dsui_3198	COG0473	3-isopropylmalate dehydrogenase activity
Dsui_3199	COG0066	3-isopropylmalate dehydratase activity
Dsui_3201	COG0065	Catalyzes the isomerization between 2-isopropylmalate and 3-isopropylmalate, via the formation of 2-isopropylmaleate
Dsui_3204	COG0082	Catalyzes the anti-1,4-elimination of the C-3 phosphate and the C-6 proR hydrogen from 5-enolpyruvylshikimate-3-phosphate (EPSP) to yield chorismate, which is the branch point compound that serves as the starting substrate for the three terminal pathways of aromatic amino acid biosynthesis. This reaction introduces a second double bond into the aromatic ring system
Dsui_3212	COG0318	PFAM AMP-dependent synthetase and ligase
Dsui_3214	COG1074	ATP-dependent DNA helicase activity
Dsui_3216	COG1146	Ferredoxins are iron-sulfur proteins that transfer electrons in a wide variety of metabolic reactions
Dsui_3218	COG1158	Facilitates transcription termination by a mechanism that involves Rho binding to the nascent RNA, activation of Rho's RNA-dependent ATPase activity, and release of the mRNA from the DNA template
Dsui_3219	COG0254	rRNA binding
Dsui_3222	COG1949	3'-to-5' exoribonuclease specific for small oligoribonucleotides
Dsui_3224	COG2154	pterin-4-alpha-carbinolamine dehydratase
Dsui_3225	COG1162	GTPase activity
Dsui_3226	COG3129	Specifically methylates the adenine in position 1618 of 23S rRNA
Dsui_3227	COG0119	Catalyzes the condensation of the acetyl group of acetyl-CoA with 3-methyl-2-oxobutanoate (2-oxoisovalerate) to form 3-carboxy-3-hydroxy-4-methylpentanoate (2-isopropylmalate)
Dsui_3229	COG1305	Transglutaminase-like
Dsui_3232	COG3109	RNA chaperone with significant RNA binding, RNA strand exchange and RNA duplexing activities
Dsui_3236	COG2308	Evidence 4 Homologs of previously reported genes of
Dsui_3237	COG0840	transmembrane signaling receptor activity
Dsui_3238	COG0840	transmembrane signaling receptor activity
Dsui_3239	COG0183	Belongs to the thiolase family
Dsui_3241	COG0494	nUDIX hydrolase
Dsui_3244	COG0505	Belongs to the CarA family
Dsui_3245	COG1666	GTP binding
Dsui_3246	COG3123	guanosine phosphorylase activity
Dsui_3248	COG0137	argininosuccinate synthase activity
Dsui_3249	COG0078	Reversibly catalyzes the transfer of the carbamoyl group from carbamoyl phosphate (CP) to the N(epsilon) atom of ornithine (ORN) to produce L-citrulline
Dsui_3250	COG4992	N2-acetyl-L-ornithine:2-oxoglutarate 5-aminotransferase activity
Dsui_3251	COG1192	Involved in chromosome partitioning
Dsui_3254	COG0268	Binds directly to 16S ribosomal RNA
Dsui_3256	COG1881	PFAM PEBP family protein
Dsui_3257	COG1168	Bifunctional PLP-dependent enzyme with beta-cystaTHIonase and maltose regulon repressor activities
Dsui_3259	COG1028	Short-chain dehydrogenase reductase Sdr
Dsui_3260	COG3808	pump that utilizes the energy of pyrophosphate hydrolysis as the driving force for
Dsui_3261	COG0205	6-phosphofructokinase activity
Dsui_3262	COG0563	adenylate kinase activity
Dsui_3263	COG1212	Activates KDO (a required 8-carbon sugar) for incorporation into bacterial lipopolysaccharide in Gram-negative bacteria
Dsui_3264	COG2835	tetraacyldisaccharide 4'-kinase activity
Dsui_3265	COG1663	tetraacyldisaccharide 4'-kinase activity
Dsui_3266	COG0848	biopolymer transport protein
Dsui_3267	COG0811	peptide transport
Dsui_3268	COG1570	exodeoxyribonuclease VII activity
Dsui_3271	COG1219	ATP-dependent specificity component of the Clp protease. It directs the protease to specific substrates. Can perform chaperone functions in the absence of ClpP
Dsui_3279	COG1526	Required for formate dehydrogenase (FDH) activity. Acts as a sulfur carrier protein that transfers sulfur from IscS to the molybdenum cofactor prior to its insertion into FDH
Dsui_3280	COG2864	formate dehydrogenase
Dsui_3281	COG0437	4 iron, 4 sulfur cluster binding
Dsui_3282	COG3383	formate dehydrogenase (NAD+) activity
Dsui_3282	COG0243	molybdopterin cofactor binding
Dsui_3283	COG3058	Necessary for formate dehydrogenase activity
Dsui_3285	COG5002	protein histidine kinase activity
Dsui_3286	COG2204	response regulator
Dsui_3288	COG1366	Belongs to the anti-sigma-factor antagonist family
Dsui_3290	COG3161	chorismate lyase activity
Dsui_3294	COG4579	[isocitrate dehydrogenase (NADP+)] phosphatase activity
Dsui_3296	COG0538	isocitrate dehydrogenase activity
Dsui_3298	COG4651	solute:proton antiporter activity
Dsui_3298	COG1226	(belongs to the monovalent cation proton antiporter 2 (CPA2) transporter (TC 2.A.37) family)
Dsui_3299	COG0526	COG0526, thiol-disulfide isomerase and thioredoxins
Dsui_3302	COG1129	ABC transporter
Dsui_3303	COG0348	domain, Protein
Dsui_3304	COG0437	4 iron, 4 sulfur cluster binding
Dsui_3308	COG2863	cytochrome
Dsui_3309	COG4263	nitrous-oxide reductase activity
Dsui_3311	COG1999	signal sequence binding
Dsui_3318	COG2010	Cytochrome c
Dsui_3319	COG0007	Multifunctional enzyme that catalyzes the SAM-dependent methylations of uroporphyrinogen III at position C-2 and C-7 to form precorrin-2 via precorrin-1. Then it catalyzes the NAD- dependent ring dehydrogenation of precorrin-2 to yield sirohydrochlorin. Finally, it catalyzes the ferrochelation of sirohydrochlorin to yield siroheme
Dsui_3319	COG1648	precorrin-2 dehydrogenase activity
Dsui_3320	COG1575	Belongs to the MenA family. Type 1 subfamily
Dsui_3322	COG0809	Transfers and isomerizes the ribose moiety from AdoMet to the 7-aminomethyl group of 7-deazaguanine (preQ1-tRNA) to give epoxyqueuosine (oQ-tRNA)
Dsui_3323	COG0343	queuine tRNA-ribosyltransferase activity
Dsui_3324	COG1862	Preprotein translocase
Dsui_3325	COG0342	Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. SecDF uses the proton motive force (PMF) to complete protein translocation after the ATP-dependent function of SecA
Dsui_3326	COG0341	Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. SecDF uses the proton motive force (PMF) to complete protein translocation after the ATP-dependent function of SecA
Dsui_3328	COG3909	cytochrome
Dsui_3331	COG0015	Belongs to the lyase 1 family. Adenylosuccinate lyase subfamily
Dsui_3332	COG0625	glutathione transferase activity
Dsui_3333	COG2204	response regulator
Dsui_3335	COG2204	response regulator
Dsui_3336	COG0482	sulfurtransferase activity
Dsui_3341	COG0859	PFAM glycosyl transferase family 9
Dsui_3343	COG0429	hydrolase of the alpha beta-hydrolase fold
Dsui_3345	COG3434	signal transduction protein containing EAL and modified HD-GYP domains
Dsui_3346	COG3434	signal transduction protein containing EAL and modified HD-GYP domains
Dsui_3351	COG1858	cytochrome C peroxidase
Dsui_3352	COG0664	- Catabolite gene activator and regulatory subunit of cAMP-dependent protein
Dsui_3356	COG0466	ATP-dependent serine protease that mediates the selective degradation of mutant and abnormal proteins as well as certain short-lived regulatory proteins. Required for cellular homeostasis and for survival from DNA damage and developmental changes induced by stress. Degrades polypeptides processively to yield small peptide fragments that are 5 to 10 amino acids long. Binds to DNA in a double-stranded, site-specific manner
Dsui_3364	COG0013	Catalyzes the attachment of alanine to tRNA(Ala) in a two-step reaction alanine is first activated by ATP to form Ala- AMP and then transferred to the acceptor end of tRNA(Ala). Also edits incorrectly charged Ser-tRNA(Ala) and Gly-tRNA(Ala) via its editing domain
Dsui_3366	COG0584	glycerophosphoryl diester phosphodiesterase
Dsui_3369	COG1960	acyl-CoA dehydrogenase activity
Dsui_3371	COG0667	Aldo Keto reductase
Dsui_3373	COG1283	sodium-dependent phosphate transmembrane transporter activity
Dsui_3376	COG0436	Aminotransferase
Dsui_3379	COG0182	Catalyzes the interconversion of methylthioribose-1- phosphate (MTR-1-P) into methylthioribulose-1-phosphate (MTRu-1- P)
Dsui_3380	COG0235	Class ii aldolase
Dsui_3383	COG0664	- Catabolite gene activator and regulatory subunit of cAMP-dependent protein
Dsui_3386	COG4566	intracellular signal transduction
Dsui_3387	COG4191	Histidine kinase
Dsui_3389	COG1024	Enoyl-CoA hydratase
Dsui_3391	COG2071	gamma-glutamyl-gamma-aminobutyrate hydrolase activity
Dsui_3395	COG2814	Major facilitator Superfamily
Dsui_3398	COG2826	transposase and inactivated derivatives, IS30 family
Dsui_3401	COG0312	modulator of DNA gyrase
Dsui_3402	COG0388	Catalyzes the ATP-dependent amidation of deamido-NAD to form NAD. Uses L-glutamine as a nitrogen source
Dsui_3404	COG1391	[glutamine synthetase]-adenylyl-L-tyrosine phosphorylase
Dsui_3406	COG0513	Belongs to the DEAD box helicase family
Dsui_3410	COG0631	protein serine/threonine phosphatase activity
Dsui_3413	COG0247	lactate metabolic process
Dsui_3414	COG0277	FAD linked oxidase domain protein
Dsui_3415	COG0277	FAD linked oxidase domain protein
Dsui_3418	COG0730	response to heat
Dsui_3422	COG2703	oxygen carrier activity
Dsui_3423	COG3622	Belongs to the hyi family
Dsui_3424	COG2096	Adenosyltransferase
Dsui_3425	COG0251	oxidation-reduction process
Dsui_3426	COG0583	DNA-binding transcription factor activity
Dsui_3427	COG1335	isochorismatase
Dsui_3434	COG3811	Belongs to the UPF0386 family
Dsui_3436	COG2084	Dehydrogenase
Dsui_3438	COG2084	Dehydrogenase
Dsui_3442	COG0446	pyridine nucleotide-disulphide oxidoreductase
Dsui_3443	COG0845	Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family
Dsui_3444	COG0722	Stereospecific condensation of phosphoenolpyruvate (PEP) and D-erythrose-4-phosphate (E4P) giving rise to 3-deoxy-D- arabino-heptulosonate-7-phosphate (DAHP)
Dsui_3447	COG0642	Histidine kinase
Dsui_3448	COG0745	RESPONSE REGULATOR receiver
Dsui_3450	COG0427	acetyl-CoA hydrolase
Dsui_3451	COG2223	nitrite transmembrane transporter activity
Dsui_3452	COG0615	ADP-L-glycero-beta-D-manno-heptose biosynthetic process
Dsui_3455	COG2206	PFAM metal-dependent phosphohydrolase, HD sub domain
Dsui_3457	COG3158	transport of potassium into the cell
Dsui_3458	COG0850	regulation of cytokinetic process
Dsui_3460	COG0851	Prevents the cell division inhibition by proteins MinC and MinD at internal division sites while permitting inhibition at polar sites. This ensures cell division at the proper site by restricting the formation of a division septum at the midpoint of the long axis of the cell
Dsui_3463	COG0600	ABC-type nitrate sulfonate bicarbonate transport system permease component
Dsui_3464	COG1116	anion transmembrane transporter activity
Dsui_3467	COG2204	response regulator
Dsui_3469	COG2197	response regulator
Dsui_3472	COG0745	RESPONSE REGULATOR receiver
Dsui_3475	COG0840	transmembrane signaling receptor activity
Dsui_3476	COG0835	chemotaxis
Dsui_3479	COG0629	single-stranded DNA binding
Dsui_3480	COG2814	Major facilitator Superfamily
Dsui_3481	COG1027	Aspartate ammonia-lyase
Dsui_3482	COG1301	dicarboxylic acid transport
Dsui_3483	COG3136	membrane protein required for alginate biosynthesis
Dsui_3494	COG0761	Catalyzes the conversion of 1-hydroxy-2-methyl-2-(E)- butenyl 4-diphosphate (HMBPP) into a mixture of isopentenyl diphosphate (IPP) and dimethylallyl diphosphate (DMAPP). Acts in the terminal step of the DOXP MEP pathway for isoprenoid precursor biosynthesis
Dsui_3495	COG1047	Peptidyl-prolyl cis-trans
Dsui_3496	COG2041	Part of the MsrPQ system that repairs oxidized periplasmic proteins containing methionine sulfoxide residues (Met-O), using respiratory chain electrons. Thus protects these proteins from oxidative-stress damage caused by reactive species of oxygen and chlorine generated by the host defense mechanisms. MsrPQ is essential for the maintenance of envelope integrity under bleach stress, rescuing a wide series of structurally unrelated periplasmic proteins from methionine oxidation. The catalytic subunit MsrP is non-stereospecific, being able to reduce both (R-) and (S-) diastereoisomers of methionine sulfoxide
Dsui_3497	COG0597	This protein specifically catalyzes the removal of signal peptides from prolipoproteins
Dsui_3498	COG0060	amino acids such as valine, to avoid such errors it has two additional distinct tRNA(Ile)-dependent editing activities. One activity is designated as 'pretransfer' editing and involves the hydrolysis of activated Val-AMP. The other activity is designated 'posttransfer' editing and involves deacylation of mischarged Val-tRNA(Ile)
Dsui_3499	COG0196	riboflavin kinase activity
Dsui_3500	COG0860	N-Acetylmuramoyl-L-alanine amidase
Dsui_3501	COG0802	atpase or kinase
Dsui_3502	COG1600	Catalyzes the conversion of epoxyqueuosine (oQ) to queuosine (Q), which is a hypermodified base found in the wobble positions of tRNA(Asp), tRNA(Asn), tRNA(His) and tRNA(Tyr)
Dsui_3508	COG1722	exodeoxyribonuclease VII activity
Dsui_3509	COG0142	geranyltranstransferase activity
Dsui_3510	COG1154	Catalyzes the acyloin condensation reaction between C atoms 2 and 3 of pyruvate and glyceraldehyde 3-phosphate to yield 1-deoxy-D-xylulose-5-phosphate (DXP)
Dsui_3511	COG1469	GTP cyclohydrolase I activity
Dsui_3512	COG0335	large ribosomal subunit rRNA binding
Dsui_3513	COG0336	Belongs to the RNA methyltransferase TrmD family
Dsui_3514	COG0806	An accessory protein needed during the final step in the assembly of 30S ribosomal subunit, possibly for assembly of the head region. Probably interacts with S19. Essential for efficient processing of 16S rRNA. May be needed both before and after RbfA during the maturation of 16S rRNA. It has affinity for free ribosomal 30S subunits but not for 70S ribosomes
Dsui_3515	COG0228	four-way junction DNA binding
Dsui_3517	COG1295	ribonuclease BN
Dsui_3519	COG0119	Catalyzes the condensation of the acetyl group of acetyl-CoA with 3-methyl-2-oxobutanoate (2-oxoisovalerate) to form 3-carboxy-3-hydroxy-4-methylpentanoate (2-isopropylmalate)
Dsui_3523	COG0745	RESPONSE REGULATOR receiver
Dsui_3525	COG1183	phosphatidylcholine synthase activity
Dsui_3526	COG0688	phosphatidylethanolamine metabolic process
Dsui_3527	COG0059	Involved in the biosynthesis of branched-chain amino acids (BCAA). Catalyzes an alkyl-migration followed by a ketol- acid reduction of (S)-2-acetolactate (S2AL) to yield (R)-2,3- dihydroxy-isovalerate. In the isomerase reaction, S2AL is rearranged via a Mg-dependent methyl migration to produce 3- hydroxy-3-methyl-2-ketobutyrate (HMKB). In the reductase reaction, this 2-ketoacid undergoes a metal-dependent reduction by NADPH to yield (R)-2,3-dihydroxy-isovalerate
Dsui_3528	COG0440	acetolactate synthase activity
Dsui_3529	COG0028	Belongs to the TPP enzyme family
Dsui_3535	COG0795	lipopolysaccharide-transporting ATPase activity
Dsui_3536	COG0260	Presumably involved in the processing and regular turnover of intracellular proteins. Catalyzes the removal of unsubstituted N-terminal amino acids from various peptides
Dsui_3539	COG0525	valine-tRNA ligase activity