Dsui_0007 SM00357 Cold shock protein domain Dsui_0009 SM00382 ATPases associated with a variety of cellular activities Dsui_0009 SM01086 C-terminal, D2-small domain, of ClpB protein Dsui_0015 SM00116 Domain in cystathionine beta-synthase and other proteins. Dsui_0026 SM01091 Transporter associated domain Dsui_0035 SM00248 ankyrin repeats Dsui_0039 SM00650 Ribosomal RNA adenine dimethylases Dsui_0043 SM00100 Cyclic nucleotide-monophosphate binding domain Dsui_0043 SM00419 helix_turn_helix, cAMP Regulatory protein Dsui_0079 SM00858 Dsui_0079 Dsui_0084 SM00382 ATPases associated with a variety of cellular activities Dsui_0089 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). Dsui_0089 SM01049 Dsui_0089 Dsui_0092 SM01001 AIR carboxylase Dsui_0096 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). Dsui_0096 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain Dsui_0099 SM00749 bacterial OsmY and nodulation domain Dsui_0101 SM00465 GIY-YIG type nucleases (URI domain) Dsui_0101 SM00479 Dsui_0101 Dsui_0107 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. Dsui_0109 SM00448 cheY-homologous receiver domain Dsui_0109 SM00850 LytTr DNA-binding domain Dsui_0112 SM00100 Cyclic nucleotide-monophosphate binding domain Dsui_0112 SM00220 Serine/Threonine protein kinases, catalytic domain Dsui_0117 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). Dsui_0120 SM00937 Dsui_0120 Dsui_0127 SM00346 helix_turn_helix isocitrate lyase regulation Dsui_0130 SM00919 Malic enzyme, NAD binding domain Dsui_0130 SM01274 Dsui_0130 Dsui_0134 SM00644 Dsui_0134 Dsui_0135 SM00382 ATPases associated with a variety of cellular activities Dsui_0135 SM00448 cheY-homologous receiver domain Dsui_0136 SM00387 Histidine kinase-like ATPases Dsui_0136 SM00388 His Kinase A (phosphoacceptor) domain Dsui_0141 SM00729 Elongator protein 3, MiaB family, Radical SAM Dsui_0143 SM00887 Ethylbenzene dehydrogenase Dsui_0150 SM00382 ATPases associated with a variety of cellular activities Dsui_0150 SM00448 cheY-homologous receiver domain Dsui_0151 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain Dsui_0151 SM00387 Histidine kinase-like ATPases Dsui_0151 SM00388 His Kinase A (phosphoacceptor) domain Dsui_0152 SM00091 PAS domain Dsui_0166 SM00359 Putative RNA-binding Domain in PseudoUridine synthase and Archaeosine transglycosylase Dsui_0181 SM00507 HNH nucleases Dsui_0184 SM00530 Helix-turn-helix XRE-family like proteins Dsui_0186 SM00487 DEAD-like helicases superfamily Dsui_0227 SM00957 SecA DEAD-like domain Dsui_0227 SM00958 SecA preprotein cross-linking domain Dsui_0232 SM00864 Tubulin/FtsZ family, GTPase domain Dsui_0232 SM00865 Tubulin/FtsZ family, C-terminal domain Dsui_0233 SM00842 Cell division protein FtsA Dsui_0253 SM00910 Dsui_0253 Dsui_0254 SM00363 S4 RNA-binding domain Dsui_0258 SM00382 ATPases associated with a variety of cellular activities Dsui_0262 SM00052 Putative diguanylate phosphodiesterase Dsui_0262 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) Dsui_0262 SM00091 PAS domain Dsui_0262 SM00267 diguanylate cyclase Dsui_0265 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain Dsui_0265 SM00387 Histidine kinase-like ATPases Dsui_0265 SM00388 His Kinase A (phosphoacceptor) domain Dsui_0266 SM00448 cheY-homologous receiver domain Dsui_0266 SM00862 Transcriptional regulatory protein, C terminal Dsui_0268 SM00382 ATPases associated with a variety of cellular activities Dsui_0271 SM00448 cheY-homologous receiver domain Dsui_0271 SM00862 Transcriptional regulatory protein, C terminal Dsui_0272 SM00382 ATPases associated with a variety of cellular activities Dsui_0272 SM00387 Histidine kinase-like ATPases Dsui_0272 SM00388 His Kinase A (phosphoacceptor) domain Dsui_0284 SM00883 Chaperonin 10 Kd subunit Dsui_0300 SM00028 Tetratricopeptide repeats Dsui_0300 SM00448 cheY-homologous receiver domain Dsui_0301 SM00387 Histidine kinase-like ATPases Dsui_0307 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). Dsui_0309 SM00487 DEAD-like helicases superfamily Dsui_0309 SM00490 helicase superfamily c-terminal domain Dsui_0311 SM00487 DEAD-like helicases superfamily Dsui_0311 SM00490 helicase superfamily c-terminal domain Dsui_0313 SM00028 Tetratricopeptide repeats Dsui_0320 SM00342 helix_turn_helix, arabinose operon control protein Dsui_0328 SM00382 ATPases associated with a variety of cellular activities Dsui_0329 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) Dsui_0329 SM00091 PAS domain Dsui_0329 SM00387 Histidine kinase-like ATPases Dsui_0329 SM00388 His Kinase A (phosphoacceptor) domain Dsui_0329 SM01079 Dsui_0329 Dsui_0330 SM00448 cheY-homologous receiver domain Dsui_0331 SM00091 PAS domain Dsui_0331 SM00331 Sigma factor PP2C-like phosphatases Dsui_0331 SM00448 cheY-homologous receiver domain Dsui_0333 SM00662 RNA polymerases D Dsui_0334 SM00363 S4 RNA-binding domain Dsui_0334 SM01390 Dsui_0334 Dsui_0348 SM00739 KOW (Kyprides, Ouzounis, Woese) motif. Dsui_0349 SM01374 Dsui_0349 Dsui_0353 SM00322 K homology RNA-binding domain Dsui_0356 SM01382 Dsui_0356 Dsui_0356 SM01383 Dsui_0356 Dsui_0360 SM01403 Dsui_0360 Dsui_0362 SM00838 Elongation factor G C-terminus Dsui_0362 SM00889 Elongation factor G, domain IV Dsui_0365 SM00663 RNA polymerase I subunit A N-terminus Dsui_0370 SM00649 Ribosomal protein L11/L12 Dsui_0371 SM00738 In Spt5p, this domain may confer affinity for Spt4p. It possesses a RNP-like fold. Dsui_0371 SM00739 KOW (Kyprides, Ouzounis, Woese) motif. Dsui_0382 SM00421 helix_turn_helix, Lux Regulon Dsui_0382 SM00448 cheY-homologous receiver domain Dsui_0389 SM00878 Biotin carboxylase C-terminal domain Dsui_0397 SM00563 Phosphate acyltransferases Dsui_0406 SM00450 Rhodanese Homology Domain Dsui_0414 SM00382 ATPases associated with a variety of cellular activities Dsui_0415 SM00382 ATPases associated with a variety of cellular activities Dsui_0416 SM00345 helix_turn_helix gluconate operon transcriptional repressor Dsui_0416 SM00895 Dsui_0416 Dsui_0420 SM00345 helix_turn_helix gluconate operon transcriptional repressor Dsui_0421 SM01057 Eukaryotic-type carbonic anhydrase Dsui_0428 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). Dsui_0428 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain Dsui_0434 SM00316 Ribosomal protein S1-like RNA-binding domain Dsui_0435 SM00671 Sel1-like repeats. Dsui_0441 SM00116 Domain in cystathionine beta-synthase and other proteins. Dsui_0441 SM00924 MgtE intracellular N domain Dsui_0446 SM00955 Dsui_0446 Dsui_0459 SM00279 Helix-hairpin-helix class 2 (Pol1 family) motifs Dsui_0459 SM00474 3'-5' exonuclease Dsui_0459 SM00475 5'-3' exonuclease Dsui_0459 SM00482 DNA polymerase A domain Dsui_0467 SM00382 ATPases associated with a variety of cellular activities Dsui_0470 SM00855 Phosphoglycerate mutase family Dsui_0484 SM00382 ATPases associated with a variety of cellular activities Dsui_0485 SM00278 Helix-hairpin-helix DNA-binding motif class 1 Dsui_0491 SM00729 Elongator protein 3, MiaB family, Radical SAM Dsui_0495 SM00331 Sigma factor PP2C-like phosphatases Dsui_0495 SM00332 Serine/threonine phosphatases, family 2C, catalytic domain Dsui_0496 SM00220 Serine/Threonine protein kinases, catalytic domain Dsui_0498 SM00072 Guanylate kinase homologues. Dsui_0499 SM01409 Dsui_0499 Dsui_0500 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. Dsui_0500 SM00954 Region found in RelA / SpoT proteins Dsui_0506 SM00052 Putative diguanylate phosphodiesterase Dsui_0506 SM00267 diguanylate cyclase Dsui_0508 SM00926 Molybdopterin oxidoreductase Fe4S4 domain Dsui_0513 SM00267 diguanylate cyclase Dsui_0516 SM00878 Biotin carboxylase C-terminal domain Dsui_0520 SM00345 helix_turn_helix gluconate operon transcriptional repressor Dsui_0520 SM00895 Dsui_0520 Dsui_0531 SM00382 ATPases associated with a variety of cellular activities Dsui_0536 SM00387 Histidine kinase-like ATPases Dsui_0537 SM00903 Flavin reductase like domain Dsui_0543 SM00919 Malic enzyme, NAD binding domain Dsui_0543 SM01274 Dsui_0543 Dsui_0558 SM00028 Tetratricopeptide repeats Dsui_0564 SM00382 ATPases associated with a variety of cellular activities Dsui_0568 SM00091 PAS domain Dsui_0568 SM00267 diguanylate cyclase Dsui_0575 SM00893 Electron transfer flavoprotein domain Dsui_0576 SM00893 Electron transfer flavoprotein domain Dsui_0580 SM00382 ATPases associated with a variety of cellular activities Dsui_0580 SM01086 C-terminal, D2-small domain, of ClpB protein Dsui_0584 SM00382 ATPases associated with a variety of cellular activities Dsui_0588 SM00833 Cobalamin synthesis protein cobW C-terminal domain Dsui_0589 SM00833 Cobalamin synthesis protein cobW C-terminal domain Dsui_0594 SM00732 Likely ribonuclease with RNase H fold. Dsui_0599 SM00091 PAS domain Dsui_0599 SM00850 LytTr DNA-binding domain Dsui_0600 SM01152 Dsui_0600 Dsui_0604 SM00382 ATPases associated with a variety of cellular activities Dsui_0606 SM00981 Dsui_0606 Dsui_0611 SM00052 Putative diguanylate phosphodiesterase Dsui_0616 SM00382 ATPases associated with a variety of cellular activities Dsui_0619 SM00965 Secretin and TonB N terminus short domain Dsui_0626 SM00382 ATPases associated with a variety of cellular activities Dsui_0627 SM00382 ATPases associated with a variety of cellular activities Dsui_0635 SM00062 Bacterial periplasmic substrate-binding proteins Dsui_0638 SM00382 ATPases associated with a variety of cellular activities Dsui_0642 SM00996 S-adenosyl-L-homocysteine hydrolase Dsui_0642 SM00997 S-adenosyl-L-homocysteine hydrolase, NAD binding domain Dsui_0643 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. Dsui_0653 SM00359 Putative RNA-binding Domain in PseudoUridine synthase and Archaeosine transglycosylase Dsui_0656 SM00073 Histidine Phosphotransfer domain Dsui_0656 SM00260 Two component signalling adaptor domain Dsui_0656 SM00387 Histidine kinase-like ATPases Dsui_0656 SM00448 cheY-homologous receiver domain Dsui_0656 SM01231 Dsui_0656 Dsui_0657 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). Dsui_0659 SM00448 cheY-homologous receiver domain Dsui_0660 SM00448 cheY-homologous receiver domain Dsui_0673 SM00836 DALR anticodon binding domain Dsui_0673 SM01016 Arginyl tRNA synthetase N terminal dom Dsui_0696 SM00044 Adenylyl- / guanylyl cyclase, catalytic domain Dsui_0696 SM00240 Forkhead associated domain Dsui_0697 SM00220 Serine/Threonine protein kinases, catalytic domain Dsui_0705 SM00382 ATPases associated with a variety of cellular activities Dsui_0707 SM00382 ATPases associated with a variety of cellular activities Dsui_0708 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) Dsui_0708 SM00091 PAS domain Dsui_0723 SM00260 Two component signalling adaptor domain Dsui_0724 SM00382 ATPases associated with a variety of cellular activities Dsui_0729 SM00736 Dystroglycan-type cadherin-like domains. Dsui_0729 SM00869 Autotransporter beta-domain Dsui_0749 SM00052 Putative diguanylate phosphodiesterase Dsui_0749 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) Dsui_0749 SM00091 PAS domain Dsui_0749 SM00267 diguanylate cyclase Dsui_0749 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain Dsui_0753 SM00382 ATPases associated with a variety of cellular activities Dsui_0757 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. Dsui_0758 SM00382 ATPases associated with a variety of cellular activities Dsui_0760 SM00052 Putative diguanylate phosphodiesterase Dsui_0760 SM00091 PAS domain Dsui_0760 SM00267 diguanylate cyclase Dsui_0760 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain Dsui_0764 SM00938 Nitrogen regulatory protein P-II Dsui_0768 SM00318 Staphylococcal nuclease homologues Dsui_0771 SM00857 Resolvase, N terminal domain Dsui_0773 SM00857 Resolvase, N terminal domain Dsui_0776 SM00073 Histidine Phosphotransfer domain Dsui_0776 SM00091 PAS domain Dsui_0776 SM00387 Histidine kinase-like ATPases Dsui_0776 SM00388 His Kinase A (phosphoacceptor) domain Dsui_0776 SM00448 cheY-homologous receiver domain Dsui_0777 SM00448 cheY-homologous receiver domain Dsui_0777 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. Dsui_0779 SM01018 B12 binding domain Dsui_0780 SM00822 Dsui_0780 Dsui_0782 SM00859 Semialdehyde dehydrogenase, NAD binding domain Dsui_0786 SM00729 Elongator protein 3, MiaB family, Radical SAM Dsui_0789 SM00267 diguanylate cyclase Dsui_0793 SM00646 Dsui_0793 Dsui_0794 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. Dsui_0798 SM00947 Carbonic anhydrase Dsui_0803 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) Dsui_0803 SM00091 PAS domain Dsui_0803 SM00267 diguanylate cyclase Dsui_0805 SM00487 DEAD-like helicases superfamily Dsui_0805 SM00490 helicase superfamily c-terminal domain Dsui_0809 SM00448 cheY-homologous receiver domain Dsui_0810 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain Dsui_0810 SM00387 Histidine kinase-like ATPases Dsui_0810 SM00388 His Kinase A (phosphoacceptor) domain Dsui_0818 SM00257 Lysin motif Dsui_0821 SM00436 Bacterial DNA topoisomeraes I ATP-binding domain Dsui_0821 SM00437 Bacterial DNA topoisomerase I DNA-binding domain Dsui_0821 SM00493 Dsui_0821 Dsui_0829 SM00387 Histidine kinase-like ATPases Dsui_0829 SM00433 TopoisomeraseII Dsui_0830 SM00480 DNA polymerase III beta subunit Dsui_0831 SM00382 ATPases associated with a variety of cellular activities Dsui_0831 SM00760 Bacterial dnaA protein helix-turn-helix domain Dsui_0835 SM01234 Dsui_0835 Dsui_0841 SM00382 ATPases associated with a variety of cellular activities Dsui_0842 SM00382 ATPases associated with a variety of cellular activities Dsui_0845 SM00448 cheY-homologous receiver domain Dsui_0846 SM01228 Dsui_0846 Dsui_0849 SM00470 ParB-like nuclease domain Dsui_0857 SM00382 ATPases associated with a variety of cellular activities Dsui_0860 SM00978 Dsui_0860 Dsui_0863 SM00448 cheY-homologous receiver domain Dsui_0863 SM00862 Transcriptional regulatory protein, C terminal Dsui_0864 SM00091 PAS domain Dsui_0864 SM00387 Histidine kinase-like ATPases Dsui_0864 SM00388 His Kinase A (phosphoacceptor) domain Dsui_0867 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. Dsui_0883 SM00345 helix_turn_helix gluconate operon transcriptional repressor Dsui_0884 SM00845 GatB domain Dsui_0894 SM00052 Putative diguanylate phosphodiesterase Dsui_0894 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. Dsui_0894 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) Dsui_0894 SM00091 PAS domain Dsui_0894 SM00267 diguanylate cyclase Dsui_0895 SM00938 Nitrogen regulatory protein P-II Dsui_0899 SM00936 Penicillin-binding protein 5, C-terminal domain Dsui_0903 SM00729 Elongator protein 3, MiaB family, Radical SAM Dsui_0916 SM00382 ATPases associated with a variety of cellular activities Dsui_0919 SM00448 cheY-homologous receiver domain Dsui_0919 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. Dsui_0921 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) Dsui_0921 SM00091 PAS domain Dsui_0921 SM00387 Histidine kinase-like ATPases Dsui_0921 SM00388 His Kinase A (phosphoacceptor) domain Dsui_0921 SM00448 cheY-homologous receiver domain Dsui_0929 SM00849 Metallo-beta-lactamase superfamily Dsui_0930 SM00382 ATPases associated with a variety of cellular activities Dsui_0938 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. Dsui_0939 SM00267 diguanylate cyclase Dsui_0939 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain Dsui_0940 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. Dsui_0940 SM00382 ATPases associated with a variety of cellular activities Dsui_0966 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). Dsui_0966 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain Dsui_0970 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) Dsui_0970 SM00091 PAS domain Dsui_0970 SM00267 diguanylate cyclase Dsui_0972 SM00849 Metallo-beta-lactamase superfamily Dsui_0973 SM00422 helix_turn_helix, mercury resistance Dsui_0982 SM00878 Biotin carboxylase C-terminal domain Dsui_0983 SM00052 Putative diguanylate phosphodiesterase Dsui_0983 SM00267 diguanylate cyclase Dsui_0987 SM00849 Metallo-beta-lactamase superfamily Dsui_0994 SM00464 Found in ATP-dependent protease La (LON) Dsui_0997 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). Dsui_0997 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain Dsui_0998 SM00478 endonuclease III Dsui_1004 SM00903 Flavin reductase like domain Dsui_1009 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) Dsui_1009 SM00091 PAS domain Dsui_1009 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain Dsui_1009 SM00387 Histidine kinase-like ATPases Dsui_1009 SM00388 His Kinase A (phosphoacceptor) domain Dsui_1009 SM00448 cheY-homologous receiver domain Dsui_1011 SM00052 Putative diguanylate phosphodiesterase Dsui_1011 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) Dsui_1011 SM00091 PAS domain Dsui_1011 SM00267 diguanylate cyclase Dsui_1011 SM01079 Dsui_1011 Dsui_1023 SM00382 ATPases associated with a variety of cellular activities Dsui_1024 SM00382 ATPases associated with a variety of cellular activities Dsui_1024 SM00962 SRP54-type protein, GTPase domain Dsui_1024 SM00963 SRP54-type protein, helical bundle domain Dsui_1031 SM00898 Formamidopyrimidine-DNA glycosylase N-terminal domain Dsui_1031 SM01232 Dsui_1031 Dsui_1032 SM00028 Tetratricopeptide repeats Dsui_1036 SM01400 Dsui_1036 Dsui_1041 SM00155 Phospholipase D. Active site motifs. Dsui_1044 SM00028 Tetratricopeptide repeats Dsui_1047 SM00450 Rhodanese Homology Domain Dsui_1048 SM01230 Dsui_1048 Dsui_1050 SM00387 Histidine kinase-like ATPases Dsui_1050 SM00388 His Kinase A (phosphoacceptor) domain Dsui_1051 SM00382 ATPases associated with a variety of cellular activities Dsui_1051 SM00448 cheY-homologous receiver domain Dsui_1061 SM00925 MltA specific insert domain Dsui_1064 SM00422 helix_turn_helix, mercury resistance Dsui_1067 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain Dsui_1067 SM00387 Histidine kinase-like ATPases Dsui_1067 SM00388 His Kinase A (phosphoacceptor) domain Dsui_1068 SM00448 cheY-homologous receiver domain Dsui_1068 SM00862 Transcriptional regulatory protein, C terminal Dsui_1076 SM00746 metallochaperone-like domain Dsui_1090 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). Dsui_1090 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain Dsui_1103 SM00342 helix_turn_helix, arabinose operon control protein Dsui_1107 SM00100 Cyclic nucleotide-monophosphate binding domain Dsui_1109 SM00382 ATPases associated with a variety of cellular activities Dsui_1113 SM00382 ATPases associated with a variety of cellular activities Dsui_1116 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). Dsui_1116 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain Dsui_1123 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). Dsui_1123 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain Dsui_1147 SM00091 PAS domain Dsui_1147 SM00387 Histidine kinase-like ATPases Dsui_1147 SM00388 His Kinase A (phosphoacceptor) domain Dsui_1154 SM00382 ATPases associated with a variety of cellular activities Dsui_1154 SM00448 cheY-homologous receiver domain Dsui_1161 SM00460 Transglutaminase/protease-like homologues Dsui_1167 SM00382 ATPases associated with a variety of cellular activities Dsui_1177 SM00887 Ethylbenzene dehydrogenase Dsui_1179 SM00363 S4 RNA-binding domain Dsui_1180 SM00448 cheY-homologous receiver domain Dsui_1181 SM00387 Histidine kinase-like ATPases Dsui_1184 SM01219 Dsui_1184 Dsui_1187 SM00842 Cell division protein FtsA Dsui_1191 SM00965 Secretin and TonB N terminus short domain Dsui_1194 SM00729 Elongator protein 3, MiaB family, Radical SAM Dsui_1197 SM01091 Transporter associated domain Dsui_1200 SM00836 DALR anticodon binding domain Dsui_1202 SM00563 Phosphate acyltransferases Dsui_1205 SM00448 cheY-homologous receiver domain Dsui_1207 SM00235 Zinc-dependent metalloprotease Dsui_1210 SM00400 zinc finger Dsui_1210 SM00493 Dsui_1210 Dsui_1210 SM00766 DNA primase DnaG DnaB-binding Dsui_1214 SM01207 Dsui_1214 Dsui_1215 SM00905 Dihydroneopterin aldolase Dsui_1228 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. Dsui_1229 SM00829 Enoylreductase Dsui_1236 SM00852 Probable molybdopterin binding domain Dsui_1242 SM00028 Tetratricopeptide repeats Dsui_1257 SM00481 DNA polymerase alpha chain like domain Dsui_1261 SM00448 cheY-homologous receiver domain Dsui_1264 SM00855 Phosphoglycerate mutase family Dsui_1270 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. Dsui_1270 SM00245 tail specific protease Dsui_1272 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor Dsui_1273 SM00450 Rhodanese Homology Domain Dsui_1279 SM00382 ATPases associated with a variety of cellular activities Dsui_1292 SM00965 Secretin and TonB N terminus short domain Dsui_1294 SM00028 Tetratricopeptide repeats Dsui_1297 SM00729 Elongator protein 3, MiaB family, Radical SAM Dsui_1297 SM00876 Biotin and Thiamin Synthesis associated domain Dsui_1306 SM01004 Delta-aminolevulinic acid dehydratase Dsui_1317 SM00834 Putative regulatory protein Dsui_1322 SM00382 ATPases associated with a variety of cellular activities Dsui_1322 SM00962 SRP54-type protein, GTPase domain Dsui_1322 SM00963 SRP54-type protein, helical bundle domain Dsui_1326 SM00116 Domain in cystathionine beta-synthase and other proteins. Dsui_1344 SM00849 Metallo-beta-lactamase superfamily Dsui_1347 SM00073 Histidine Phosphotransfer domain Dsui_1351 SM00487 DEAD-like helicases superfamily Dsui_1351 SM00490 helicase superfamily c-terminal domain Dsui_1354 SM00345 helix_turn_helix gluconate operon transcriptional repressor Dsui_1359 SM00934 Orotidine 5'-phosphate decarboxylase / HUMPS family Dsui_1361 SM00267 diguanylate cyclase Dsui_1364 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain Dsui_1364 SM00331 Sigma factor PP2C-like phosphatases Dsui_1372 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). Dsui_1372 SM01049 Dsui_1372 Dsui_1373 SM00382 ATPases associated with a variety of cellular activities Dsui_1373 SM00487 DEAD-like helicases superfamily Dsui_1373 SM00490 helicase superfamily c-terminal domain Dsui_1373 SM00847 Helicase associated domain (HA2) Add an annotation Dsui_1375 SM00852 Probable molybdopterin binding domain Dsui_1382 SM00116 Domain in cystathionine beta-synthase and other proteins. Dsui_1386 SM00044 Adenylyl- / guanylyl cyclase, catalytic domain Dsui_1393 SM00382 ATPases associated with a variety of cellular activities Dsui_1394 SM00028 Tetratricopeptide repeats Dsui_1396 SM00382 ATPases associated with a variety of cellular activities Dsui_1397 SM00382 ATPases associated with a variety of cellular activities Dsui_1397 SM00448 cheY-homologous receiver domain Dsui_1398 SM00382 ATPases associated with a variety of cellular activities Dsui_1404 SM00382 ATPases associated with a variety of cellular activities Dsui_1426 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. Dsui_1429 SM00052 Putative diguanylate phosphodiesterase Dsui_1429 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) Dsui_1429 SM00091 PAS domain Dsui_1429 SM00267 diguanylate cyclase Dsui_1430 SM00091 PAS domain Dsui_1430 SM00267 diguanylate cyclase Dsui_1432 SM00448 cheY-homologous receiver domain Dsui_1434 SM00138 Methyltransferase, chemotaxis proteins Dsui_1435 SM00260 Two component signalling adaptor domain Dsui_1436 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). Dsui_1436 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain Dsui_1437 SM00073 Histidine Phosphotransfer domain Dsui_1437 SM00260 Two component signalling adaptor domain Dsui_1437 SM00387 Histidine kinase-like ATPases Dsui_1437 SM01231 Dsui_1437 Dsui_1439 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). Dsui_1440 SM00448 cheY-homologous receiver domain Dsui_1446 SM00881 CoA binding domain Dsui_1449 SM00220 Serine/Threonine protein kinases, catalytic domain Dsui_1449 SM01080 Dsui_1449 Dsui_1450 SM00331 Sigma factor PP2C-like phosphatases Dsui_1450 SM00332 Serine/threonine phosphatases, family 2C, catalytic domain Dsui_1451 SM00240 Forkhead associated domain Dsui_1452 SM00044 Adenylyl- / guanylyl cyclase, catalytic domain Dsui_1452 SM01080 Dsui_1452 Dsui_1453 SM00849 Metallo-beta-lactamase superfamily Dsui_1454 SM00100 Cyclic nucleotide-monophosphate binding domain Dsui_1454 SM00450 Rhodanese Homology Domain Dsui_1455 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. Dsui_1455 SM00382 ATPases associated with a variety of cellular activities Dsui_1458 SM00855 Phosphoglycerate mutase family Dsui_1459 SM00880 Dsui_1459 Dsui_1459 SM01118 Dsui_1459 Dsui_1460 SM00100 Cyclic nucleotide-monophosphate binding domain Dsui_1460 SM00419 helix_turn_helix, cAMP Regulatory protein Dsui_1462 SM00382 ATPases associated with a variety of cellular activities Dsui_1463 SM00091 PAS domain Dsui_1463 SM00382 ATPases associated with a variety of cellular activities Dsui_1473 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). Dsui_1489 SM00155 Phospholipase D. Active site motifs. Dsui_1492 SM00382 ATPases associated with a variety of cellular activities Dsui_1492 SM01086 C-terminal, D2-small domain, of ClpB protein Dsui_1493 SM00155 Phospholipase D. Active site motifs. Dsui_1494 SM00382 ATPases associated with a variety of cellular activities Dsui_1501 SM00052 Putative diguanylate phosphodiesterase Dsui_1501 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) Dsui_1501 SM00091 PAS domain Dsui_1501 SM00267 diguanylate cyclase Dsui_1504 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. Dsui_1508 SM00382 ATPases associated with a variety of cellular activities Dsui_1522 SM00220 Serine/Threonine protein kinases, catalytic domain Dsui_1524 SM00347 helix_turn_helix multiple antibiotic resistance protein Dsui_1528 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain Dsui_1528 SM00387 Histidine kinase-like ATPases Dsui_1528 SM00388 His Kinase A (phosphoacceptor) domain Dsui_1529 SM00448 cheY-homologous receiver domain Dsui_1529 SM00862 Transcriptional regulatory protein, C terminal Dsui_1531 SM00052 Putative diguanylate phosphodiesterase Dsui_1531 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) Dsui_1531 SM00091 PAS domain Dsui_1531 SM00267 diguanylate cyclase Dsui_1548 SM00448 cheY-homologous receiver domain Dsui_1549 SM00062 Bacterial periplasmic substrate-binding proteins Dsui_1549 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) Dsui_1549 SM00091 PAS domain Dsui_1549 SM00387 Histidine kinase-like ATPases Dsui_1549 SM00388 His Kinase A (phosphoacceptor) domain Dsui_1550 SM00052 Putative diguanylate phosphodiesterase Dsui_1550 SM00267 diguanylate cyclase Dsui_1550 SM00448 cheY-homologous receiver domain Dsui_1551 SM00853 MutL C terminal dimerisation domain Dsui_1551 SM01340 Dsui_1551 Dsui_1554 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) Dsui_1554 SM00091 PAS domain Dsui_1554 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain Dsui_1554 SM00387 Histidine kinase-like ATPases Dsui_1554 SM00388 His Kinase A (phosphoacceptor) domain Dsui_1554 SM00448 cheY-homologous receiver domain Dsui_1558 SM00846 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain Dsui_1560 SM00846 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain Dsui_1561 SM00861 Transketolase, pyrimidine binding domain Dsui_1564 SM00052 Putative diguanylate phosphodiesterase Dsui_1564 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) Dsui_1564 SM00091 PAS domain Dsui_1564 SM00267 diguanylate cyclase Dsui_1565 SM00052 Putative diguanylate phosphodiesterase Dsui_1565 SM00267 diguanylate cyclase Dsui_1580 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) Dsui_1580 SM00091 PAS domain Dsui_1580 SM00387 Histidine kinase-like ATPases Dsui_1580 SM00388 His Kinase A (phosphoacceptor) domain Dsui_1581 SM00421 helix_turn_helix, Lux Regulon Dsui_1581 SM00448 cheY-homologous receiver domain Dsui_1591 SM01011 Aminopeptidase P, N-terminal domain Dsui_1595 SM00798 AICARFT/IMPCHase bienzyme Dsui_1595 SM00851 MGS-like domain Dsui_1596 SM01209 Dsui_1596 Dsui_1596 SM01210 Dsui_1596 Dsui_1606 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. Dsui_1617 SM00448 cheY-homologous receiver domain Dsui_1617 SM00862 Transcriptional regulatory protein, C terminal Dsui_1618 SM00387 Histidine kinase-like ATPases Dsui_1618 SM00388 His Kinase A (phosphoacceptor) domain Dsui_1624 SM00822 Dsui_1624 Dsui_1635 SM00849 Metallo-beta-lactamase superfamily Dsui_1635 SM01027 Beta-Casp domain Dsui_1639 SM00849 Metallo-beta-lactamase superfamily Dsui_1646 SM00100 Cyclic nucleotide-monophosphate binding domain Dsui_1646 SM00419 helix_turn_helix, cAMP Regulatory protein Dsui_1647 SM00729 Elongator protein 3, MiaB family, Radical SAM Dsui_1652 SM00899 Dsui_1652 Dsui_1666 SM00702 Prolyl 4-hydroxylase alpha subunit homologues. Dsui_1669 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. Dsui_1671 SM00965 Secretin and TonB N terminus short domain Dsui_1674 SM00052 Putative diguanylate phosphodiesterase Dsui_1677 SM00363 S4 RNA-binding domain Dsui_1677 SM01390 Dsui_1677 Dsui_1687 SM00938 Nitrogen regulatory protein P-II Dsui_1688 SM00463 Small MutS-related domain Dsui_1690 SM00100 Cyclic nucleotide-monophosphate binding domain Dsui_1690 SM00419 helix_turn_helix, cAMP Regulatory protein Dsui_1691 SM00382 ATPases associated with a variety of cellular activities Dsui_1691 SM00843 Dsui_1691 Dsui_1694 SM00382 ATPases associated with a variety of cellular activities Dsui_1697 SM00062 Bacterial periplasmic substrate-binding proteins Dsui_1701 SM00507 HNH nucleases Dsui_1706 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). Dsui_1707 SM00448 cheY-homologous receiver domain Dsui_1708 SM00073 Histidine Phosphotransfer domain Dsui_1708 SM00260 Two component signalling adaptor domain Dsui_1708 SM00387 Histidine kinase-like ATPases Dsui_1708 SM01231 Dsui_1708 Dsui_1709 SM00260 Two component signalling adaptor domain Dsui_1710 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) Dsui_1710 SM00091 PAS domain Dsui_1710 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). Dsui_1710 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain Dsui_1711 SM00138 Methyltransferase, chemotaxis proteins Dsui_1713 SM00448 cheY-homologous receiver domain Dsui_1715 SM00331 Sigma factor PP2C-like phosphatases Dsui_1715 SM00448 cheY-homologous receiver domain Dsui_1716 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). Dsui_1716 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain Dsui_1717 SM00260 Two component signalling adaptor domain Dsui_1717 SM00448 cheY-homologous receiver domain Dsui_1718 SM00260 Two component signalling adaptor domain Dsui_1718 SM00448 cheY-homologous receiver domain Dsui_1719 SM00448 cheY-homologous receiver domain Dsui_1721 SM00073 Histidine Phosphotransfer domain Dsui_1721 SM00260 Two component signalling adaptor domain Dsui_1721 SM00387 Histidine kinase-like ATPases Dsui_1721 SM01231 Dsui_1721 Dsui_1724 SM00382 ATPases associated with a variety of cellular activities Dsui_1724 SM00962 SRP54-type protein, GTPase domain Dsui_1731 SM00858 Dsui_1731 Dsui_1740 SM00047 Lysozyme subfamily 2 Dsui_1753 SM00382 ATPases associated with a variety of cellular activities Dsui_1757 SM00091 PAS domain Dsui_1757 SM00387 Histidine kinase-like ATPases Dsui_1757 SM00388 His Kinase A (phosphoacceptor) domain Dsui_1758 SM00382 ATPases associated with a variety of cellular activities Dsui_1758 SM00448 cheY-homologous receiver domain Dsui_1760 SM00028 Tetratricopeptide repeats Dsui_1772 SM00382 ATPases associated with a variety of cellular activities Dsui_1773 SM00382 ATPases associated with a variety of cellular activities Dsui_1785 SM00028 Tetratricopeptide repeats Dsui_1786 SM00028 Tetratricopeptide repeats Dsui_1789 SM00267 diguanylate cyclase Dsui_1798 SM00382 ATPases associated with a variety of cellular activities Dsui_1800 SM00346 helix_turn_helix isocitrate lyase regulation Dsui_1809 SM00382 ATPases associated with a variety of cellular activities Dsui_1811 SM00493 Dsui_1811 Dsui_1817 SM00926 Molybdopterin oxidoreductase Fe4S4 domain Dsui_1824 SM00091 PAS domain Dsui_1824 SM00267 diguanylate cyclase Dsui_1828 SM01012 Dsui_1828 Dsui_1833 SM00382 ATPases associated with a variety of cellular activities Dsui_1836 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. Dsui_1849 SM00226 Low molecular weight phosphatase family Dsui_1850 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor Dsui_1851 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain Dsui_1851 SM00387 Histidine kinase-like ATPases Dsui_1851 SM00388 His Kinase A (phosphoacceptor) domain Dsui_1852 SM00448 cheY-homologous receiver domain Dsui_1852 SM00862 Transcriptional regulatory protein, C terminal Dsui_1855 SM00054 EF-hand, calcium binding motif Dsui_1860 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). Dsui_1860 SM01049 Dsui_1860 Dsui_1862 SM00421 helix_turn_helix, Lux Regulon Dsui_1862 SM00448 cheY-homologous receiver domain Dsui_1863 SM00448 cheY-homologous receiver domain Dsui_1863 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. Dsui_1864 SM00897 FIST N domain Dsui_1864 SM01204 Dsui_1864 Dsui_1865 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) Dsui_1865 SM00091 PAS domain Dsui_1865 SM00387 Histidine kinase-like ATPases Dsui_1865 SM00388 His Kinase A (phosphoacceptor) domain Dsui_1865 SM00448 cheY-homologous receiver domain Dsui_1866 SM00448 cheY-homologous receiver domain Dsui_1867 SM00387 Histidine kinase-like ATPases Dsui_1867 SM00388 His Kinase A (phosphoacceptor) domain Dsui_1868 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. Dsui_1881 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). Dsui_1881 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain Dsui_1883 SM00382 ATPases associated with a variety of cellular activities Dsui_1884 SM00387 Histidine kinase-like ATPases Dsui_1884 SM00388 His Kinase A (phosphoacceptor) domain Dsui_1885 SM00448 cheY-homologous receiver domain Dsui_1886 SM00448 cheY-homologous receiver domain Dsui_1886 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. Dsui_1887 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) Dsui_1887 SM00091 PAS domain Dsui_1887 SM00387 Histidine kinase-like ATPases Dsui_1888 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. Dsui_1890 SM00052 Putative diguanylate phosphodiesterase Dsui_1890 SM00091 PAS domain Dsui_1890 SM00267 diguanylate cyclase Dsui_1890 SM00448 cheY-homologous receiver domain Dsui_1891 SM00922 Mandelate racemase / muconate lactonizing enzyme, C-terminal domain Dsui_1899 SM00967 RNA 2'-O ribose methyltransferase substrate binding Dsui_1903 SM00729 Elongator protein 3, MiaB family, Radical SAM Dsui_1905 SM00062 Bacterial periplasmic substrate-binding proteins Dsui_1905 SM00091 PAS domain Dsui_1905 SM00387 Histidine kinase-like ATPases Dsui_1905 SM00388 His Kinase A (phosphoacceptor) domain Dsui_1905 SM00448 cheY-homologous receiver domain Dsui_1911 SM00470 ParB-like nuclease domain Dsui_1912 SM00448 cheY-homologous receiver domain Dsui_1913 SM00387 Histidine kinase-like ATPases Dsui_1938 SM00434 DNA Topoisomerase IV Dsui_1940 SM00830 Chorismate mutase type II Dsui_1943 SM00316 Ribosomal protein S1-like RNA-binding domain Dsui_1944 SM00411 bacterial (prokaryotic) histone like domain Dsui_1946 SM00028 Tetratricopeptide repeats Dsui_1947 SM00984 UDP binding domain Dsui_1956 SM00450 Rhodanese Homology Domain Dsui_1958 SM00863 Threonyl and Alanyl tRNA synthetase second additional domain Dsui_1963 SM00873 B3/4 domain Dsui_1963 SM00874 tRNA synthetase B5 domain Dsui_1963 SM00896 Ferredoxin-fold anticodon binding domain Dsui_1964 SM00411 bacterial (prokaryotic) histone like domain Dsui_1965 SM00422 helix_turn_helix, mercury resistance Dsui_1967 SM00528 Domain in histone-like proteins of HNS family Dsui_1970 SM00257 Lysin motif Dsui_1973 SM00460 Transglutaminase/protease-like homologues Dsui_1975 SM00382 ATPases associated with a variety of cellular activities Dsui_1977 SM01130 Dsui_1977 Dsui_1979 SM00849 Metallo-beta-lactamase superfamily Dsui_1993 SM00382 ATPases associated with a variety of cellular activities Dsui_1995 SM00460 Transglutaminase/protease-like homologues Dsui_1996 SM00670 Large family of predicted nucleotide-binding domains Dsui_2004 SM00116 Domain in cystathionine beta-synthase and other proteins. Dsui_2005 SM00479 Dsui_2005 Dsui_2008 SM00028 Tetratricopeptide repeats Dsui_2010 SM00318 Staphylococcal nuclease homologues Dsui_2013 SM00382 ATPases associated with a variety of cellular activities Dsui_2017 SM00382 ATPases associated with a variety of cellular activities Dsui_2032 SM00052 Putative diguanylate phosphodiesterase Dsui_2032 SM00091 PAS domain Dsui_2032 SM00267 diguanylate cyclase Dsui_2034 SM00342 helix_turn_helix, arabinose operon control protein Dsui_2034 SM00871 Bacterial transcription activator, effector binding domain Dsui_2038 SM00834 Putative regulatory protein Dsui_2040 SM00881 CoA binding domain Dsui_2043 SM00116 Domain in cystathionine beta-synthase and other proteins. Dsui_2044 SM00450 Rhodanese Homology Domain Dsui_2046 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) Dsui_2046 SM00091 PAS domain Dsui_2046 SM00267 diguanylate cyclase Dsui_2046 SM00448 cheY-homologous receiver domain Dsui_2048 SM00382 ATPases associated with a variety of cellular activities Dsui_2049 SM00382 ATPases associated with a variety of cellular activities Dsui_2053 SM00507 HNH nucleases Dsui_2056 SM00507 HNH nucleases Dsui_2057 SM00382 ATPases associated with a variety of cellular activities Dsui_2058 SM00382 ATPases associated with a variety of cellular activities Dsui_2068 SM00382 ATPases associated with a variety of cellular activities Dsui_2077 SM00419 helix_turn_helix, cAMP Regulatory protein Dsui_2079 SM00387 Histidine kinase-like ATPases Dsui_2079 SM00388 His Kinase A (phosphoacceptor) domain Dsui_2080 SM00421 helix_turn_helix, Lux Regulon Dsui_2080 SM00448 cheY-homologous receiver domain Dsui_2081 SM00345 helix_turn_helix gluconate operon transcriptional repressor Dsui_2094 SM00869 Autotransporter beta-domain Dsui_2096 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). Dsui_2096 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain Dsui_2104 SM00382 ATPases associated with a variety of cellular activities Dsui_2108 SM00487 DEAD-like helicases superfamily Dsui_2108 SM00490 helicase superfamily c-terminal domain Dsui_2114 SM00450 Rhodanese Homology Domain Dsui_2117 SM00882 Coenzyme A transferase Dsui_2118 SM00882 Coenzyme A transferase Dsui_2121 SM00382 ATPases associated with a variety of cellular activities Dsui_2122 SM00062 Bacterial periplasmic substrate-binding proteins Dsui_2123 SM00052 Putative diguanylate phosphodiesterase Dsui_2124 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). Dsui_2125 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) Dsui_2125 SM00091 PAS domain Dsui_2125 SM00387 Histidine kinase-like ATPases Dsui_2125 SM00388 His Kinase A (phosphoacceptor) domain Dsui_2125 SM00448 cheY-homologous receiver domain Dsui_2126 SM01002 Alanine dehydrogenase/PNT, C-terminal domain Dsui_2126 SM01003 Alanine dehydrogenase/PNT, N-terminal domain Dsui_2129 SM00411 bacterial (prokaryotic) histone like domain Dsui_2146 SM00411 bacterial (prokaryotic) histone like domain Dsui_2148 SM00052 Putative diguanylate phosphodiesterase Dsui_2148 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) Dsui_2148 SM00091 PAS domain Dsui_2148 SM00267 diguanylate cyclase Dsui_2148 SM01049 Dsui_2148 Dsui_2149 SM00491 Dsui_2149 Dsui_2152 SM00852 Probable molybdopterin binding domain Dsui_2156 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). Dsui_2156 SM01049 Dsui_2156 Dsui_2157 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) Dsui_2157 SM00091 PAS domain Dsui_2157 SM00387 Histidine kinase-like ATPases Dsui_2158 SM00421 helix_turn_helix, Lux Regulon Dsui_2158 SM00448 cheY-homologous receiver domain Dsui_2159 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). Dsui_2160 SM00052 Putative diguanylate phosphodiesterase Dsui_2160 SM00091 PAS domain Dsui_2160 SM00267 diguanylate cyclase Dsui_2161 SM00382 ATPases associated with a variety of cellular activities Dsui_2161 SM01086 C-terminal, D2-small domain, of ClpB protein Dsui_2164 SM00387 Histidine kinase-like ATPases Dsui_2164 SM00388 His Kinase A (phosphoacceptor) domain Dsui_2167 SM00965 Secretin and TonB N terminus short domain Dsui_2172 SM00347 helix_turn_helix multiple antibiotic resistance protein Dsui_2179 SM00903 Flavin reductase like domain Dsui_2181 SM00342 helix_turn_helix, arabinose operon control protein Dsui_2189 SM00881 CoA binding domain Dsui_2197 SM00382 ATPases associated with a variety of cellular activities Dsui_2197 SM00994 ClpX C4-type zinc finger Dsui_2197 SM01086 C-terminal, D2-small domain, of ClpB protein Dsui_2198 SM00382 ATPases associated with a variety of cellular activities Dsui_2198 SM00464 Found in ATP-dependent protease La (LON) Dsui_2199 SM00411 bacterial (prokaryotic) histone like domain Dsui_2210 SM00345 helix_turn_helix gluconate operon transcriptional repressor Dsui_2210 SM00866 Dsui_2210 Dsui_2217 SM00861 Transketolase, pyrimidine binding domain Dsui_2226 SM00342 helix_turn_helix, arabinose operon control protein Dsui_2228 SM00829 Enoylreductase Dsui_2240 SM00073 Histidine Phosphotransfer domain Dsui_2240 SM00091 PAS domain Dsui_2240 SM00387 Histidine kinase-like ATPases Dsui_2240 SM00388 His Kinase A (phosphoacceptor) domain Dsui_2240 SM00448 cheY-homologous receiver domain Dsui_2244 SM00533 DNA-binding domain of DNA mismatch repair MUTS family Dsui_2244 SM00534 ATPase domain of DNA mismatch repair MUTS family Dsui_2248 SM00448 cheY-homologous receiver domain Dsui_2248 SM00862 Transcriptional regulatory protein, C terminal Dsui_2249 SM00387 Histidine kinase-like ATPases Dsui_2249 SM00388 His Kinase A (phosphoacceptor) domain Dsui_2250 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. Dsui_2251 SM00387 Histidine kinase-like ATPases Dsui_2251 SM00388 His Kinase A (phosphoacceptor) domain Dsui_2252 SM00345 helix_turn_helix gluconate operon transcriptional repressor Dsui_2260 SM00345 helix_turn_helix gluconate operon transcriptional repressor Dsui_2263 SM00954 Region found in RelA / SpoT proteins Dsui_2265 SM00481 DNA polymerase alpha chain like domain Dsui_2275 SM00530 Helix-turn-helix XRE-family like proteins Dsui_2301 SM00052 Putative diguanylate phosphodiesterase Dsui_2301 SM00267 diguanylate cyclase Dsui_2304 SM00893 Electron transfer flavoprotein domain Dsui_2305 SM00893 Electron transfer flavoprotein domain Dsui_2307 SM00382 ATPases associated with a variety of cellular activities Dsui_2310 SM00450 Rhodanese Homology Domain Dsui_2315 SM00886 Stress responsive A/B Barrel Domain Dsui_2317 SM01192 Dsui_2317 Dsui_2317 SM01193 Dsui_2317 Dsui_2319 SM00347 helix_turn_helix multiple antibiotic resistance protein Dsui_2341 SM00382 ATPases associated with a variety of cellular activities Dsui_2349 SM00849 Metallo-beta-lactamase superfamily Dsui_2350 SM00422 helix_turn_helix, mercury resistance Dsui_2356 SM00867 YceI-like domain Dsui_2357 SM00867 YceI-like domain Dsui_2358 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain Dsui_2358 SM00387 Histidine kinase-like ATPases Dsui_2358 SM00388 His Kinase A (phosphoacceptor) domain Dsui_2360 SM00382 ATPases associated with a variety of cellular activities Dsui_2360 SM00448 cheY-homologous receiver domain Dsui_2365 SM00052 Putative diguanylate phosphodiesterase Dsui_2365 SM00091 PAS domain Dsui_2365 SM00267 diguanylate cyclase Dsui_2374 SM00271 DnaJ molecular chaperone homology domain Dsui_2382 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) Dsui_2382 SM00387 Histidine kinase-like ATPases Dsui_2382 SM00388 His Kinase A (phosphoacceptor) domain Dsui_2382 SM00448 cheY-homologous receiver domain Dsui_2385 SM00487 DEAD-like helicases superfamily Dsui_2385 SM00490 helicase superfamily c-terminal domain Dsui_2385 SM00982 Dsui_2385 Dsui_2385 SM01058 CarD-like/TRCF domain Dsui_2393 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. Dsui_2394 SM00052 Putative diguanylate phosphodiesterase Dsui_2394 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) Dsui_2394 SM00091 PAS domain Dsui_2394 SM00267 diguanylate cyclase Dsui_2396 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. Dsui_2397 SM00100 Cyclic nucleotide-monophosphate binding domain Dsui_2399 SM00014 Acid phosphatase homologues Dsui_2400 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain Dsui_2400 SM00387 Histidine kinase-like ATPases Dsui_2400 SM00388 His Kinase A (phosphoacceptor) domain Dsui_2401 SM00448 cheY-homologous receiver domain Dsui_2401 SM00862 Transcriptional regulatory protein, C terminal Dsui_2405 SM00986 Uracil DNA glycosylase superfamily Dsui_2405 SM00987 UreE urease accessory protein, C-terminal domain Dsui_2411 SM01005 Alanine racemase, C-terminal domain Dsui_2412 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) Dsui_2412 SM00091 PAS domain Dsui_2412 SM00267 diguanylate cyclase Dsui_2413 SM00382 ATPases associated with a variety of cellular activities Dsui_2416 SM00255 Toll - interleukin 1 - resistance Dsui_2419 SM00052 Putative diguanylate phosphodiesterase Dsui_2419 SM00091 PAS domain Dsui_2419 SM00267 diguanylate cyclase Dsui_2420 SM00729 Elongator protein 3, MiaB family, Radical SAM Dsui_2421 SM00052 Putative diguanylate phosphodiesterase Dsui_2423 SM00838 Elongation factor G C-terminus Dsui_2425 SM00052 Putative diguanylate phosphodiesterase Dsui_2425 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) Dsui_2425 SM00091 PAS domain Dsui_2425 SM00267 diguanylate cyclase Dsui_2427 SM00729 Elongator protein 3, MiaB family, Radical SAM Dsui_2428 SM00100 Cyclic nucleotide-monophosphate binding domain Dsui_2434 SM00487 DEAD-like helicases superfamily Dsui_2434 SM00490 helicase superfamily c-terminal domain Dsui_2435 SM00226 Low molecular weight phosphatase family Dsui_2436 SM00316 Ribosomal protein S1-like RNA-binding domain Dsui_2437 SM00363 S4 RNA-binding domain Dsui_2447 SM00827 Acyl transferase domain in polyketide synthase (PKS) enzymes. Dsui_2448 SM00822 Dsui_2448 Dsui_2450 SM00825 Beta-ketoacyl synthase Dsui_2455 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. Dsui_2457 SM00838 Elongation factor G C-terminus Dsui_2460 SM00358 Double-stranded RNA binding motif Dsui_2460 SM00535 Ribonuclease III family Dsui_2467 SM00841 Elongation factor P, C-terminal Dsui_2467 SM01185 Dsui_2467 Dsui_2469 SM00986 Uracil DNA glycosylase superfamily Dsui_2469 SM00987 UreE urease accessory protein, C-terminal domain Dsui_2470 SM00278 Helix-hairpin-helix DNA-binding motif class 1 Dsui_2470 SM00465 GIY-YIG type nucleases (URI domain) Dsui_2480 SM00710 Parallel beta-helix repeats Dsui_2481 SM00479 Dsui_2481 Dsui_2484 SM00849 Metallo-beta-lactamase superfamily Dsui_2485 SM00448 cheY-homologous receiver domain Dsui_2486 SM00267 diguanylate cyclase Dsui_2486 SM00448 cheY-homologous receiver domain Dsui_2490 SM00220 Serine/Threonine protein kinases, catalytic domain Dsui_2492 SM00857 Resolvase, N terminal domain Dsui_2493 SM00422 helix_turn_helix, mercury resistance Dsui_2498 SM00422 helix_turn_helix, mercury resistance Dsui_2500 SM00857 Resolvase, N terminal domain Dsui_2505 SM00530 Helix-turn-helix XRE-family like proteins Dsui_2510 SM00926 Molybdopterin oxidoreductase Fe4S4 domain Dsui_2511 SM00421 helix_turn_helix, Lux Regulon Dsui_2511 SM00448 cheY-homologous receiver domain Dsui_2512 SM00387 Histidine kinase-like ATPases Dsui_2512 SM00388 His Kinase A (phosphoacceptor) domain Dsui_2519 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). Dsui_2524 SM00530 Helix-turn-helix XRE-family like proteins Dsui_2526 SM00857 Resolvase, N terminal domain Dsui_2530 SM00363 S4 RNA-binding domain Dsui_2538 SM00822 Dsui_2538 Dsui_2540 SM00729 Elongator protein 3, MiaB family, Radical SAM Dsui_2546 SM00316 Ribosomal protein S1-like RNA-binding domain Dsui_2546 SM00732 Likely ribonuclease with RNase H fold. Dsui_2547 SM00052 Putative diguanylate phosphodiesterase Dsui_2547 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) Dsui_2547 SM00091 PAS domain Dsui_2547 SM00267 diguanylate cyclase Dsui_2558 SM00382 ATPases associated with a variety of cellular activities Dsui_2565 SM01126 Dsui_2565 Dsui_2581 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. Dsui_2605 SM00052 Putative diguanylate phosphodiesterase Dsui_2605 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) Dsui_2605 SM00091 PAS domain Dsui_2605 SM00267 diguanylate cyclase Dsui_2608 SM00436 Bacterial DNA topoisomeraes I ATP-binding domain Dsui_2608 SM00437 Bacterial DNA topoisomerase I DNA-binding domain Dsui_2608 SM00493 Dsui_2608 Dsui_2629 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. Dsui_2644 SM00448 cheY-homologous receiver domain Dsui_2644 SM00862 Transcriptional regulatory protein, C terminal Dsui_2645 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain Dsui_2645 SM00387 Histidine kinase-like ATPases Dsui_2645 SM00388 His Kinase A (phosphoacceptor) domain Dsui_2646 SM00382 ATPases associated with a variety of cellular activities Dsui_2651 SM00248 ankyrin repeats Dsui_2659 SM00357 Cold shock protein domain Dsui_2669 SM00248 ankyrin repeats Dsui_2671 SM00116 Domain in cystathionine beta-synthase and other proteins. Dsui_2671 SM01240 Dsui_2671 Dsui_2685 SM00935 Outer membrane protein (OmpH-like) Dsui_2687 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. Dsui_2696 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. Dsui_2701 SM00278 Helix-hairpin-helix DNA-binding motif class 1 Dsui_2701 SM00292 breast cancer carboxy-terminal domain Dsui_2701 SM00532 Ligase N family Dsui_2702 SM00771 ZipA, C-terminal domain (FtsZ-binding) Dsui_2703 SM00968 SMC proteins Flexible Hinge Domain Dsui_2713 SM00244 prohibitin homologues Dsui_2718 SM00316 Ribosomal protein S1-like RNA-binding domain Dsui_2718 SM00322 K homology RNA-binding domain Dsui_2719 SM01387 Dsui_2719 Dsui_2723 SM00316 Ribosomal protein S1-like RNA-binding domain Dsui_2725 SM00363 S4 RNA-binding domain Dsui_2731 SM00481 DNA polymerase alpha chain like domain Dsui_2741 SM00091 PAS domain Dsui_2745 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). Dsui_2745 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain Dsui_2746 SM00382 ATPases associated with a variety of cellular activities Dsui_2750 SM01209 Dsui_2750 Dsui_2752 SM00382 ATPases associated with a variety of cellular activities Dsui_2759 SM00363 S4 RNA-binding domain Dsui_2760 SM00316 Ribosomal protein S1-like RNA-binding domain Dsui_2769 SM01359 Dsui_2769 Dsui_2769 SM01360 Dsui_2769 Dsui_2771 SM01322 Dsui_2771 Dsui_2779 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. Dsui_2779 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) Dsui_2779 SM00091 PAS domain Dsui_2779 SM00387 Histidine kinase-like ATPases Dsui_2779 SM00388 His Kinase A (phosphoacceptor) domain Dsui_2779 SM01079 Dsui_2779 Dsui_2780 SM00448 cheY-homologous receiver domain Dsui_2781 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) Dsui_2781 SM00091 PAS domain Dsui_2781 SM00387 Histidine kinase-like ATPases Dsui_2781 SM00388 His Kinase A (phosphoacceptor) domain Dsui_2781 SM00448 cheY-homologous receiver domain Dsui_2782 SM00448 cheY-homologous receiver domain Dsui_2782 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. Dsui_2783 SM00448 cheY-homologous receiver domain Dsui_2785 SM00434 DNA Topoisomerase IV Dsui_2786 SM00387 Histidine kinase-like ATPases Dsui_2786 SM00433 TopoisomeraseII Dsui_2797 SM00257 Lysin motif Dsui_2799 SM00382 ATPases associated with a variety of cellular activities Dsui_2804 SM00267 diguanylate cyclase Dsui_2804 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain Dsui_2806 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) Dsui_2806 SM00091 PAS domain Dsui_2806 SM00387 Histidine kinase-like ATPases Dsui_2811 SM00382 ATPases associated with a variety of cellular activities Dsui_2816 SM00954 Region found in RelA / SpoT proteins Dsui_2828 SM01126 Dsui_2828 Dsui_2833 SM00530 Helix-turn-helix XRE-family like proteins Dsui_2841 SM00729 Elongator protein 3, MiaB family, Radical SAM Dsui_2845 SM00382 ATPases associated with a variety of cellular activities Dsui_2846 SM00382 ATPases associated with a variety of cellular activities Dsui_2852 SM00912 haemagglutination activity domain Dsui_2856 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). Dsui_2856 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain Dsui_2857 SM00382 ATPases associated with a variety of cellular activities Dsui_2864 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain Dsui_2864 SM00387 Histidine kinase-like ATPases Dsui_2864 SM00388 His Kinase A (phosphoacceptor) domain Dsui_2864 SM00448 cheY-homologous receiver domain Dsui_2877 SM00382 ATPases associated with a variety of cellular activities Dsui_2879 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). Dsui_2879 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain Dsui_2879 SM01049 Dsui_2879 Dsui_2885 SM00091 PAS domain Dsui_2885 SM00387 Histidine kinase-like ATPases Dsui_2885 SM00388 His Kinase A (phosphoacceptor) domain Dsui_2885 SM00448 cheY-homologous receiver domain Dsui_2890 SM00052 Putative diguanylate phosphodiesterase Dsui_2890 SM00267 diguanylate cyclase Dsui_2892 SM01211 Dsui_2892 Dsui_2893 SM00267 diguanylate cyclase Dsui_2894 SM00052 Putative diguanylate phosphodiesterase Dsui_2894 SM00267 diguanylate cyclase Dsui_2894 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain Dsui_2915 SM00922 Mandelate racemase / muconate lactonizing enzyme, C-terminal domain Dsui_2919 SM00530 Helix-turn-helix XRE-family like proteins Dsui_2926 SM00267 diguanylate cyclase Dsui_2926 SM00448 cheY-homologous receiver domain Dsui_2935 SM01002 Alanine dehydrogenase/PNT, C-terminal domain Dsui_2935 SM01003 Alanine dehydrogenase/PNT, N-terminal domain Dsui_2943 SM00382 ATPases associated with a variety of cellular activities Dsui_2944 SM00267 diguanylate cyclase Dsui_2944 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain Dsui_2946 SM00487 DEAD-like helicases superfamily Dsui_2946 SM00490 helicase superfamily c-terminal domain Dsui_2950 SM00965 Secretin and TonB N terminus short domain Dsui_2953 SM00062 Bacterial periplasmic substrate-binding proteins Dsui_2953 SM00267 diguanylate cyclase Dsui_2958 SM00382 ATPases associated with a variety of cellular activities Dsui_2975 SM00965 Secretin and TonB N terminus short domain Dsui_2983 SM00900 Dsui_2983 Dsui_2985 SM00478 endonuclease III Dsui_2985 SM00525 Dsui_2985 Dsui_2986 SM01204 Dsui_2986 Dsui_2989 SM00091 PAS domain Dsui_2989 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). Dsui_2989 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain Dsui_2990 SM00382 ATPases associated with a variety of cellular activities Dsui_2991 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) Dsui_2991 SM00091 PAS domain Dsui_2991 SM00267 diguanylate cyclase Dsui_2994 SM00855 Phosphoglycerate mutase family Dsui_2996 SM00382 ATPases associated with a variety of cellular activities Dsui_2999 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain Dsui_2999 SM00387 Histidine kinase-like ATPases Dsui_2999 SM00388 His Kinase A (phosphoacceptor) domain Dsui_3000 SM00448 cheY-homologous receiver domain Dsui_3000 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. Dsui_3001 SM00448 cheY-homologous receiver domain Dsui_3001 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. Dsui_3002 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) Dsui_3002 SM00091 PAS domain Dsui_3002 SM00387 Histidine kinase-like ATPases Dsui_3002 SM00388 His Kinase A (phosphoacceptor) domain Dsui_3003 SM00387 Histidine kinase-like ATPases Dsui_3004 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. Dsui_3004 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) Dsui_3004 SM00091 PAS domain Dsui_3004 SM00116 Domain in cystathionine beta-synthase and other proteins. Dsui_3004 SM00267 diguanylate cyclase Dsui_3029 SM00929 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region Dsui_3030 SM00928 NADH-ubiquinone oxidoreductase-F iron-sulfur binding region Dsui_3035 SM00267 diguanylate cyclase Dsui_3044 SM00929 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region Dsui_3045 SM00928 NADH-ubiquinone oxidoreductase-F iron-sulfur binding region Dsui_3053 SM00382 ATPases associated with a variety of cellular activities Dsui_3059 SM00382 ATPases associated with a variety of cellular activities Dsui_3061 SM01103 Dsui_3061 Dsui_3064 SM00851 MGS-like domain Dsui_3064 SM01096 Carbamoyl-phosphate synthetase large chain, oligomerisation domain Dsui_3065 SM01097 Carbamoyl-phosphate synthase small chain, CPSase domain Dsui_3070 SM00062 Bacterial periplasmic substrate-binding proteins Dsui_3078 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). Dsui_3078 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain Dsui_3079 SM00100 Cyclic nucleotide-monophosphate binding domain Dsui_3079 SM00220 Serine/Threonine protein kinases, catalytic domain Dsui_3082 SM00271 DnaJ molecular chaperone homology domain Dsui_3084 SM00840 Dsui_3084 Dsui_3085 SM00028 Tetratricopeptide repeats Dsui_3092 SM00341 Helicase and RNase D C-terminal Dsui_3092 SM00487 DEAD-like helicases superfamily Dsui_3092 SM00490 helicase superfamily c-terminal domain Dsui_3092 SM00956 Dsui_3092 Dsui_3094 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. Dsui_3097 SM00342 helix_turn_helix, arabinose operon control protein Dsui_3099 SM00478 endonuclease III Dsui_3099 SM01009 AlkA N-terminal domain Dsui_3104 SM00052 Putative diguanylate phosphodiesterase Dsui_3104 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) Dsui_3104 SM00091 PAS domain Dsui_3104 SM00267 diguanylate cyclase Dsui_3105 SM00116 Domain in cystathionine beta-synthase and other proteins. Dsui_3105 SM01091 Transporter associated domain Dsui_3107 SM00849 Metallo-beta-lactamase superfamily Dsui_3108 SM00052 Putative diguanylate phosphodiesterase Dsui_3108 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) Dsui_3108 SM00091 PAS domain Dsui_3108 SM00116 Domain in cystathionine beta-synthase and other proteins. Dsui_3108 SM00267 diguanylate cyclase Dsui_3113 SM00052 Putative diguanylate phosphodiesterase Dsui_3113 SM00267 diguanylate cyclase Dsui_3119 SM00327 von Willebrand factor (vWF) type A domain Dsui_3120 SM00100 Cyclic nucleotide-monophosphate binding domain Dsui_3120 SM00419 helix_turn_helix, cAMP Regulatory protein Dsui_3123 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). Dsui_3124 SM00448 cheY-homologous receiver domain Dsui_3126 SM00729 Elongator protein 3, MiaB family, Radical SAM Dsui_3128 SM00316 Ribosomal protein S1-like RNA-binding domain Dsui_3128 SM00357 Cold shock protein domain Dsui_3128 SM00955 Dsui_3128 Dsui_3131 SM00788 Adenylosuccinate synthetase Dsui_3134 SM00244 prohibitin homologues Dsui_3135 SM00244 prohibitin homologues Dsui_3138 SM00382 ATPases associated with a variety of cellular activities Dsui_3139 SM00564 beta-propeller repeat Dsui_3144 SM00028 Tetratricopeptide repeats Dsui_3146 SM00562 Dsui_3146 Dsui_3149 SM00893 Electron transfer flavoprotein domain Dsui_3150 SM00893 Electron transfer flavoprotein domain Dsui_3151 SM00448 cheY-homologous receiver domain Dsui_3151 SM00862 Transcriptional regulatory protein, C terminal Dsui_3152 SM00387 Histidine kinase-like ATPases Dsui_3152 SM00388 His Kinase A (phosphoacceptor) domain Dsui_3159 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) Dsui_3159 SM00091 PAS domain Dsui_3159 SM00387 Histidine kinase-like ATPases Dsui_3159 SM00388 His Kinase A (phosphoacceptor) domain Dsui_3160 SM00421 helix_turn_helix, Lux Regulon Dsui_3160 SM00448 cheY-homologous receiver domain Dsui_3161 SM00052 Putative diguanylate phosphodiesterase Dsui_3161 SM00091 PAS domain Dsui_3161 SM00267 diguanylate cyclase Dsui_3164 SM00267 diguanylate cyclase Dsui_3165 SM00977 TilS substrate C-terminal domain Dsui_3167 SM00052 Putative diguanylate phosphodiesterase Dsui_3167 SM00267 diguanylate cyclase Dsui_3168 SM00897 FIST N domain Dsui_3168 SM01204 Dsui_3168 Dsui_3172 SM00849 Metallo-beta-lactamase superfamily Dsui_3174 SM00487 DEAD-like helicases superfamily Dsui_3174 SM00490 helicase superfamily c-terminal domain Dsui_3177 SM00382 ATPases associated with a variety of cellular activities Dsui_3179 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain Dsui_3179 SM00387 Histidine kinase-like ATPases Dsui_3179 SM00388 His Kinase A (phosphoacceptor) domain Dsui_3180 SM00448 cheY-homologous receiver domain Dsui_3180 SM00862 Transcriptional regulatory protein, C terminal Dsui_3197 SM00859 Semialdehyde dehydrogenase, NAD binding domain Dsui_3198 SM01329 Dsui_3198 Dsui_3207 SM00248 ankyrin repeats Dsui_3211 SM00839 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase Dsui_3213 SM00116 Domain in cystathionine beta-synthase and other proteins. Dsui_3218 SM00357 Cold shock protein domain Dsui_3218 SM00382 ATPases associated with a variety of cellular activities Dsui_3218 SM00959 Rho termination factor, N-terminal domain Dsui_3222 SM00479 Dsui_3222 Dsui_3227 SM00917 LeuA allosteric (dimerisation) domain Dsui_3228 SM00344 helix_turn_helix ASNC type Dsui_3229 SM00460 Transglutaminase/protease-like homologues Dsui_3231 SM00460 Transglutaminase/protease-like homologues Dsui_3232 SM00945 ProQ/FINO family Dsui_3237 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). Dsui_3237 SM01049 Dsui_3237 Dsui_3238 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). Dsui_3259 SM00822 Dsui_3259 Dsui_3271 SM00382 ATPases associated with a variety of cellular activities Dsui_3271 SM01086 C-terminal, D2-small domain, of ClpB protein Dsui_3273 SM00947 Carbonic anhydrase Dsui_3276 SM00507 HNH nucleases Dsui_3278 SM00729 Elongator protein 3, MiaB family, Radical SAM Dsui_3282 SM00926 Molybdopterin oxidoreductase Fe4S4 domain Dsui_3285 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain Dsui_3285 SM00387 Histidine kinase-like ATPases Dsui_3285 SM00388 His Kinase A (phosphoacceptor) domain Dsui_3286 SM00382 ATPases associated with a variety of cellular activities Dsui_3286 SM00448 cheY-homologous receiver domain Dsui_3287 SM00331 Sigma factor PP2C-like phosphatases Dsui_3287 SM00448 cheY-homologous receiver domain Dsui_3296 SM01329 Dsui_3296 Dsui_3302 SM00382 ATPases associated with a variety of cellular activities Dsui_3305 SM00710 Parallel beta-helix repeats Dsui_3324 SM01323 Dsui_3324 Dsui_3333 SM00448 cheY-homologous receiver domain Dsui_3334 SM00052 Putative diguanylate phosphodiesterase Dsui_3334 SM00091 PAS domain Dsui_3334 SM00267 diguanylate cyclase Dsui_3334 SM00448 cheY-homologous receiver domain Dsui_3335 SM00448 cheY-homologous receiver domain Dsui_3345 SM00052 Putative diguanylate phosphodiesterase Dsui_3346 SM00052 Putative diguanylate phosphodiesterase Dsui_3352 SM00100 Cyclic nucleotide-monophosphate binding domain Dsui_3352 SM00419 helix_turn_helix, cAMP Regulatory protein Dsui_3353 SM01126 Dsui_3353 Dsui_3356 SM00382 ATPases associated with a variety of cellular activities Dsui_3364 SM00863 Threonyl and Alanyl tRNA synthetase second additional domain Dsui_3374 SM00100 Cyclic nucleotide-monophosphate binding domain Dsui_3380 SM01007 Class II Aldolase and Adducin N-terminal domain Dsui_3386 SM00421 helix_turn_helix, Lux Regulon Dsui_3386 SM00448 cheY-homologous receiver domain Dsui_3387 SM00387 Histidine kinase-like ATPases Dsui_3387 SM00388 His Kinase A (phosphoacceptor) domain Dsui_3394 SM00831 Cation transporter/ATPase, N-terminus Dsui_3406 SM00487 DEAD-like helicases superfamily Dsui_3406 SM00490 helicase superfamily c-terminal domain Dsui_3410 SM00331 Sigma factor PP2C-like phosphatases Dsui_3410 SM00332 Serine/threonine phosphatases, family 2C, catalytic domain Dsui_3416 SM00345 helix_turn_helix gluconate operon transcriptional repressor Dsui_3416 SM00895 Dsui_3416 Dsui_3428 SM00342 helix_turn_helix, arabinose operon control protein Dsui_3437 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) Dsui_3437 SM00091 PAS domain Dsui_3437 SM00267 diguanylate cyclase Dsui_3439 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). Dsui_3439 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain Dsui_3447 SM00387 Histidine kinase-like ATPases Dsui_3447 SM00388 His Kinase A (phosphoacceptor) domain Dsui_3448 SM00448 cheY-homologous receiver domain Dsui_3448 SM00862 Transcriptional regulatory protein, C terminal Dsui_3449 SM00052 Putative diguanylate phosphodiesterase Dsui_3449 SM00091 PAS domain Dsui_3449 SM00267 diguanylate cyclase Dsui_3449 SM00448 cheY-homologous receiver domain Dsui_3455 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. Dsui_3455 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. Dsui_3461 SM00028 Tetratricopeptide repeats Dsui_3464 SM00382 ATPases associated with a variety of cellular activities Dsui_3465 SM00387 Histidine kinase-like ATPases Dsui_3465 SM00388 His Kinase A (phosphoacceptor) domain Dsui_3467 SM00382 ATPases associated with a variety of cellular activities Dsui_3467 SM00448 cheY-homologous receiver domain Dsui_3468 SM00387 Histidine kinase-like ATPases Dsui_3468 SM00448 cheY-homologous receiver domain Dsui_3469 SM00421 helix_turn_helix, Lux Regulon Dsui_3469 SM00448 cheY-homologous receiver domain Dsui_3470 SM00448 cheY-homologous receiver domain Dsui_3471 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). Dsui_3472 SM00448 cheY-homologous receiver domain Dsui_3474 SM00073 Histidine Phosphotransfer domain Dsui_3474 SM00260 Two component signalling adaptor domain Dsui_3474 SM00387 Histidine kinase-like ATPases Dsui_3474 SM01231 Dsui_3474 Dsui_3475 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). Dsui_3475 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain Dsui_3476 SM00260 Two component signalling adaptor domain Dsui_3477 SM00091 PAS domain Dsui_3477 SM00387 Histidine kinase-like ATPases Dsui_3485 SM00387 Histidine kinase-like ATPases Dsui_3485 SM00388 His Kinase A (phosphoacceptor) domain Dsui_3486 SM00382 ATPases associated with a variety of cellular activities Dsui_3486 SM00448 cheY-homologous receiver domain Dsui_3492 SM00564 beta-propeller repeat Dsui_3499 SM00904 Riboflavin kinase Dsui_3500 SM00646 Dsui_3500 Dsui_3504 SM00450 Rhodanese Homology Domain Dsui_3510 SM00861 Transketolase, pyrimidine binding domain Dsui_3519 SM00917 LeuA allosteric (dimerisation) domain Dsui_3523 SM00448 cheY-homologous receiver domain Dsui_3523 SM00862 Transcriptional regulatory protein, C terminal Dsui_3524 SM00387 Histidine kinase-like ATPases Dsui_3524 SM00388 His Kinase A (phosphoacceptor) domain