locus-tag class description D3868_00050 PF01571 Aminomethyltransferase folate-binding domain D3868_00055 PF01272 Transcription elongation factor, GreA/GreB, C-term D3868_00055 PF14760 Rnk N-terminus D3868_00060 PF00005 ABC transporter D3868_00075 PF02608 ABC transporter substrate-binding protein PnrA-like D3868_00100 PF00990 Diguanylate cyclase, GGDEF domain D3868_00100 PF00072 Response regulator receiver domain D3868_00105 PF00156 Phosphoribosyl transferase domain D3868_00110 PF10996 Beta-Casp domain D3868_00110 PF00753 Metallo-beta-lactamase superfamily D3868_00110 PF07521 Zn-dependent metallo-hydrolase RNA specificity domain D3868_00120 PF00563 EAL domain D3868_00120 PF00990 Diguanylate cyclase, GGDEF domain D3868_00120 PF03707 Bacterial signalling protein N terminal repeat D3868_00125 PF00106 short chain dehydrogenase D3868_00130 PF12867 DinB superfamily D3868_00130 PF03781 Sulfatase-modifying factor enzyme 1 D3868_00135 PF10017 Histidine-specific methyltransferase, SAM-dependent D3868_00145 PF00809 Pterin binding enzyme D3868_00150 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain D3868_00150 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III D3868_00150 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II D3868_00150 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I D3868_00155 PF08543 Phosphomethylpyrimidine kinase D3868_00160 PF00392 Bacterial regulatory proteins, gntR family D3868_00160 PF00155 Aminotransferase class I and II D3868_00175 PF01027 Inhibitor of apoptosis-promoting Bax1 D3868_00180 PF10011 Predicted membrane protein (DUF2254) D3868_00195 PF02567 Phenazine biosynthesis-like protein D3868_00200 PF01575 MaoC like domain D3868_00200 PF00171 Aldehyde dehydrogenase family D3868_00205 PF00012 Hsp70 protein D3868_00210 PF00120 Glutamine synthetase, catalytic domain D3868_00210 PF03951 Glutamine synthetase, beta-Grasp domain D3868_00215 PF00543 Nitrogen regulatory protein P-II D3868_00230 PF03853 YjeF-related protein N-terminus D3868_00230 PF01256 Carbohydrate kinase D3868_00245 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase D3868_00245 PF05697 Bacterial trigger factor protein (TF) D3868_00245 PF05698 Bacterial trigger factor protein (TF) C-terminus D3868_00250 PF00574 Clp protease D3868_00255 PF06689 ClpX C4-type zinc finger D3868_00255 PF07724 AAA domain (Cdc48 subfamily) D3868_00255 PF10431 C-terminal, D2-small domain, of ClpB protein D3868_00260 PF02190 ATP-dependent protease La (LON) substrate-binding domain D3868_00260 PF05362 Lon protease (S16) C-terminal proteolytic domain D3868_00260 PF00004 ATPase family associated with various cellular activities (AAA) D3868_00265 PF00216 Bacterial DNA-binding protein D3868_00280 PF00507 NADH-ubiquinone/plastoquinone oxidoreductase, chain 3 D3868_00285 PF01058 NADH ubiquinone oxidoreductase, 20 Kd subunit D3868_00290 PF00329 Respiratory-chain NADH dehydrogenase, 30 Kd subunit D3868_00295 PF00346 Respiratory-chain NADH dehydrogenase, 49 Kd subunit D3868_00305 PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit D3868_00305 PF10531 SLBB domain D3868_00305 PF10589 NADH-ubiquinone oxidoreductase-F iron-sulfur binding region D3868_00310 PF10588 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region D3868_00310 PF00384 Molybdopterin oxidoreductase D3868_00310 PF09326 NADH-ubiquinone oxidoreductase subunit G, C-terminal D3868_00315 PF00146 NADH dehydrogenase D3868_00320 PF12838 4Fe-4S dicluster domain D3868_00325 PF00499 NADH-ubiquinone/plastoquinone oxidoreductase chain 6 D3868_00330 PF00420 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L D3868_00335 PF00361 Proton-conducting membrane transporter D3868_00335 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus D3868_00340 PF01059 NADH-ubiquinone oxidoreductase chain 4, amino terminus D3868_00340 PF00361 Proton-conducting membrane transporter D3868_00345 PF00361 Proton-conducting membrane transporter D3868_00350 PF02237 Biotin protein ligase C terminal domain D3868_00350 PF03099 Biotin/lipoate A/B protein ligase family D3868_00355 PF03309 Type III pantothenate kinase D3868_00360 PF12706 Beta-lactamase superfamily domain D3868_00360 PF17770 Ribonuclease J C-terminal domain D3868_00360 PF07521 Zn-dependent metallo-hydrolase RNA specificity domain D3868_00375 PF00958 GMP synthase C terminal domain D3868_00375 PF13673 Acetyltransferase (GNAT) domain D3868_00375 PF13302 Acetyltransferase (GNAT) domain D3868_00375 PF00117 Glutamine amidotransferase class-I D3868_00375 PF03352 Methyladenine glycosylase D3868_00390 PF03129 Anticodon binding domain D3868_00390 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) D3868_00395 PF12704 MacB-like periplasmic core domain D3868_00395 PF02687 FtsX-like permease family D3868_00400 PF00005 ABC transporter D3868_00405 PF01738 Dienelactone hydrolase family D3868_00410 PF00892 EamA-like transporter family D3868_00420 PF02811 PHP domain D3868_00420 PF14579 Helix-hairpin-helix motif D3868_00420 PF17657 Bacterial DNA polymerase III alpha subunit finger domain D3868_00420 PF07733 Bacterial DNA polymerase III alpha NTPase domain D3868_00425 PF00318 Ribosomal protein S2 D3868_00430 PF00889 Elongation factor TS D3868_00435 PF00696 Amino acid kinase family D3868_00440 PF01765 Ribosome recycling factor D3868_00445 PF01255 Putative undecaprenyl diphosphate synthase D3868_00455 PF08436 1-deoxy-D-xylulose 5-phosphate reductoisomerase C-terminal domain D3868_00455 PF13288 DXP reductoisomerase C-terminal domain D3868_00455 PF02670 1-deoxy-D-xylulose 5-phosphate reductoisomerase D3868_00460 PF17820 PDZ domain D3868_00460 PF02163 Peptidase family M50 D3868_00465 PF07244 Surface antigen variable number repeat D3868_00465 PF01103 Surface antigen D3868_00475 PF07977 FabA-like domain D3868_00480 PF13720 Udp N-acetylglucosamine O-acyltransferase; Domain 2 D3868_00480 PF00132 Bacterial transferase hexapeptide (six repeats) D3868_00485 PF06230 LpxI C-terminal domain D3868_00485 PF17930 LpxI N-terminal domain D3868_00490 PF02684 Lipid-A-disaccharide synthetase D3868_00495 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily D3868_00505 PF03466 LysR substrate binding domain D3868_00505 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family D3868_00510 PF13417 Glutathione S-transferase, N-terminal domain D3868_00520 PF00285 Citrate synthase, C-terminal domain D3868_00525 PF00749 tRNA synthetases class I (E and Q), catalytic domain D3868_00530 PF00753 Metallo-beta-lactamase superfamily D3868_00530 PF13567 Domain of unknown function (DUF4131) D3868_00530 PF03772 Competence protein D3868_00535 PF01726 LexA DNA binding domain D3868_00535 PF00717 Peptidase S24-like D3868_00540 PF03454 MoeA C-terminal region (domain IV) D3868_00540 PF00994 Probable molybdopterin binding domain D3868_00540 PF03453 MoeA N-terminal region (domain I and II) D3868_00545 PF01967 MoaC family D3868_00550 PF00583 Acetyltransferase (GNAT) family D3868_00555 PF00218 Indole-3-glycerol phosphate synthase D3868_00560 PF02885 Glycosyl transferase family, helical bundle domain D3868_00560 PF00591 Glycosyl transferase family, a/b domain D3868_00565 PF00117 Glutamine amidotransferase class-I D3868_00590 PF00425 chorismate binding enzyme D3868_00590 PF04715 Anthranilate synthase component I, N terminal region D3868_00600 PF00121 Triosephosphate isomerase D3868_00605 PF03840 Preprotein translocase SecG subunit D3868_00610 PF00117 Glutamine amidotransferase class-I D3868_00610 PF06418 CTP synthase N-terminus D3868_00615 PF01738 Dienelactone hydrolase family D3868_00620 PF00793 DAHP synthetase I family D3868_00630 PF04055 Radical SAM superfamily D3868_00630 PF13186 Iron-sulfur cluster-binding domain D3868_00635 PF05402 Coenzyme PQQ synthesis protein D (PqqD) D3868_00640 PF03070 TENA/THI-4/PQQC family D3868_00645 PF12706 Beta-lactamase superfamily domain D3868_00655 PF03952 Enolase, N-terminal domain D3868_00655 PF00113 Enolase, C-terminal TIM barrel domain D3868_00665 PF01171 PP-loop family D3868_00670 PF00004 ATPase family associated with various cellular activities (AAA) D3868_00670 PF17862 AAA+ lid domain D3868_00670 PF06480 FtsH Extracellular D3868_00670 PF01434 Peptidase family M41 D3868_00685 PF08534 Redoxin D3868_00690 PF00221 Aromatic amino acid lyase D3868_00695 PF00664 ABC transporter transmembrane region D3868_00695 PF00005 ABC transporter D3868_00700 PF00529 HlyD membrane-fusion protein of T1SS D3868_00700 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion D3868_00705 PF00196 Bacterial regulatory proteins, luxR family D3868_00705 PF00072 Response regulator receiver domain D3868_00720 PF12697 Alpha/beta hydrolase family D3868_00725 PF03023 Lipid II flippase MurJ D3868_00735 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term D3868_00740 PF10073 Uncharacterized protein conserved in bacteria (DUF2312) D3868_00745 PF00291 Pyridoxal-phosphate dependent enzyme D3868_00750 PF00155 Aminotransferase class I and II D3868_00765 PF00005 ABC transporter D3868_00770 PF00528 Binding-protein-dependent transport system inner membrane component D3868_00780 PF03960 ArsC family D3868_00785 PF00072 Response regulator receiver domain D3868_00785 PF13188 PAS domain D3868_00785 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase D3868_00785 PF08448 PAS fold D3868_00785 PF00512 His Kinase A (phospho-acceptor) domain D3868_00790 PF00072 Response regulator receiver domain D3868_00795 PF00512 His Kinase A (phospho-acceptor) domain D3868_00795 PF08448 PAS fold D3868_00795 PF13188 PAS domain D3868_00795 PF00072 Response regulator receiver domain D3868_00795 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase D3868_00805 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain D3868_00805 PF17200 Single Cache domain 2 D3868_00805 PF00672 HAMP domain D3868_00815 PF01738 Dienelactone hydrolase family D3868_00815 PF00156 Phosphoribosyl transferase domain D3868_00835 PF00512 His Kinase A (phospho-acceptor) domain D3868_00835 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase D3868_00850 PF03091 CutA1 divalent ion tolerance protein D3868_00870 PF00378 Enoyl-CoA hydratase/isomerase D3868_00880 PF00572 Ribosomal protein L13 D3868_00885 PF00380 Ribosomal protein S9/S16 D3868_00890 PF02774 Semialdehyde dehydrogenase, dimerisation domain D3868_00890 PF01118 Semialdehyde dehydrogenase, NAD binding domain D3868_00895 PF00132 Bacterial transferase hexapeptide (six repeats) D3868_00900 PF00691 OmpA family D3868_00905 PF00561 alpha/beta hydrolase fold D3868_00905 PF07167 Poly-beta-hydroxybutyrate polymerase (PhaC) N-terminus D3868_00915 PF01047 MarR family D3868_00930 PF00155 Aminotransferase class I and II D3868_00935 PF03447 Homoserine dehydrogenase, NAD binding domain D3868_00935 PF00742 Homoserine dehydrogenase D3868_00935 PF01842 ACT domain D3868_00940 PF03320 Bacterial fructose-1,6-bisphosphatase, glpX-encoded D3868_00945 PF00465 Iron-containing alcohol dehydrogenase D3868_00950 PF02272 DHHA1 domain D3868_00950 PF17768 RecJ OB domain D3868_00950 PF10141 Single-strand DNA-specific exonuclease, C terminal domain D3868_00950 PF01368 DHH family D3868_00960 PF08463 EcoEI R protein C-terminal D3868_00960 PF00271 Helicase conserved C-terminal domain D3868_00960 PF04851 Type III restriction enzyme, res subunit D3868_00960 PF13588 Type I restriction enzyme R protein N terminus (HSDR_N) D3868_00970 PF01420 Type I restriction modification DNA specificity domain D3868_01015 PF00248 Aldo/keto reductase family D3868_01025 PF07690 Major Facilitator Superfamily D3868_01030 PF00850 Histone deacetylase domain D3868_01040 PF08546 Ketopantoate reductase PanE/ApbA C terminal D3868_01040 PF02558 Ketopantoate reductase PanE/ApbA D3868_01045 PF00571 CBS domain D3868_01050 PF05222 Alanine dehydrogenase/PNT, N-terminal domain D3868_01050 PF01262 Alanine dehydrogenase/PNT, C-terminal domain D3868_01055 PF12769 4TM region of pyridine nucleotide transhydrogenase, mitoch D3868_01060 PF02233 NAD(P) transhydrogenase beta subunit D3868_01065 PF00571 CBS domain D3868_01070 PF00392 Bacterial regulatory proteins, gntR family D3868_01070 PF07729 FCD domain D3868_01075 PF00205 Thiamine pyrophosphate enzyme, central domain D3868_01075 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain D3868_01075 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain D3868_01080 PF02515 CoA-transferase family III D3868_01085 PF00549 CoA-ligase D3868_01085 PF08442 ATP-grasp domain D3868_01090 PF00549 CoA-ligase D3868_01090 PF02629 CoA binding domain D3868_01095 PF07690 Major Facilitator Superfamily D3868_01100 PF07690 Major Facilitator Superfamily D3868_01110 PF01964 Radical SAM ThiC family D3868_01110 PF13667 ThiC-associated domain D3868_01115 PF07690 Major Facilitator Superfamily D3868_01120 PF13660 Domain of unknown function (DUF4147) D3868_01120 PF05161 MOFRL family D3868_01125 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase D3868_01125 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase D3868_01130 PF01261 Xylose isomerase-like TIM barrel D3868_01135 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain D3868_01135 PF00205 Thiamine pyrophosphate enzyme, central domain D3868_01135 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain D3868_01140 PF02581 Thiamine monophosphate synthase D3868_01140 PF02110 Hydroxyethylthiazole kinase family D3868_01145 PF07729 FCD domain D3868_01145 PF00392 Bacterial regulatory proteins, gntR family D3868_01150 PF02887 Pyruvate kinase, alpha/beta domain D3868_01150 PF00224 Pyruvate kinase, barrel domain D3868_01160 PF00391 PEP-utilising enzyme, mobile domain D3868_01160 PF02896 PEP-utilising enzyme, TIM barrel domain D3868_01160 PF01326 Pyruvate phosphate dikinase, PEP/pyruvate binding domain D3868_01175 PF00132 Bacterial transferase hexapeptide (six repeats) D3868_01185 PF00158 Sigma-54 interaction domain D3868_01185 PF18024 Helix-turn-helix domain D3868_01190 PF01266 FAD dependent oxidoreductase D3868_01200 PF01965 DJ-1/PfpI family D3868_01205 PF00072 Response regulator receiver domain D3868_01205 PF00196 Bacterial regulatory proteins, luxR family D3868_01210 PF00196 Bacterial regulatory proteins, luxR family D3868_01210 PF00072 Response regulator receiver domain D3868_01215 PF00941 FAD binding domain in molybdopterin dehydrogenase D3868_01215 PF03450 CO dehydrogenase flavoprotein C-terminal domain D3868_01220 PF01315 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain D3868_01220 PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase D3868_01225 PF01774 UreD urease accessory protein D3868_01230 PF00547 Urease, gamma subunit D3868_01235 PF00699 Urease beta subunit D3868_01240 PF01979 Amidohydrolase family D3868_01240 PF00449 Urease alpha-subunit, N-terminal domain D3868_01245 PF01177 Asp/Glu/Hydantoin racemase D3868_01250 PF02814 UreE urease accessory protein, N-terminal domain D3868_01250 PF05194 UreE urease accessory protein, C-terminal domain D3868_01255 PF01730 UreF D3868_01260 PF02492 CobW/HypB/UreG, nucleotide-binding domain D3868_01265 PF05239 PRC-barrel domain D3868_01265 PF09557 Domain of unknown function (DUF2382) D3868_01290 PF01022 Bacterial regulatory protein, arsR family D3868_01315 PF00535 Glycosyl transferase family 2 D3868_01320 PF01381 Helix-turn-helix D3868_01340 PF00795 Carbon-nitrogen hydrolase D3868_01345 PF01047 MarR family D3868_01355 PF01895 PhoU domain D3868_01370 PF13180 PDZ domain D3868_01375 PF00535 Glycosyl transferase family 2 D3868_01395 PF00480 ROK family D3868_01405 PF02653 Branched-chain amino acid transport system / permease component D3868_01410 PF02653 Branched-chain amino acid transport system / permease component D3868_01410 PF11862 Domain of unknown function (DUF3382) D3868_01415 PF00005 ABC transporter D3868_01415 PF12399 Branched-chain amino acid ATP-binding cassette transporter D3868_01420 PF00005 ABC transporter D3868_01430 PF13458 Periplasmic binding protein D3868_01445 PF00691 OmpA family D3868_01450 PF00072 Response regulator receiver domain D3868_01450 PF00196 Bacterial regulatory proteins, luxR family D3868_01455 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase D3868_01455 PF01627 Hpt domain D3868_01455 PF00512 His Kinase A (phospho-acceptor) domain D3868_01455 PF00672 HAMP domain D3868_01455 PF00072 Response regulator receiver domain D3868_01460 PF01558 Pyruvate ferredoxin/flavodoxin oxidoreductase D3868_01460 PF10371 Domain of unknown function D3868_01460 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain D3868_01460 PF01855 Pyruvate flavodoxin/ferredoxin oxidoreductase, thiamine diP-bdg D3868_01460 PF17147 Pyruvate:ferredoxin oxidoreductase core domain II D3868_01470 PF00849 RNA pseudouridylate synthase D3868_01480 PF13537 Glutamine amidotransferase domain D3868_01480 PF00156 Phosphoribosyl transferase domain D3868_01490 PF06745 KaiC D3868_01490 PF18073 Rubredoxin metal binding domain D3868_01495 PF00557 Metallopeptidase family M24 D3868_01510 PF00005 ABC transporter D3868_01515 PF02405 Permease MlaE D3868_01520 PF00842 Alanine racemase, C-terminal domain D3868_01520 PF01168 Alanine racemase, N-terminal domain D3868_01525 PF03796 DnaB-like helicase C terminal domain D3868_01525 PF00772 DnaB-like helicase N terminal domain D3868_01535 PF03948 Ribosomal protein L9, C-terminal domain D3868_01535 PF01281 Ribosomal protein L9, N-terminal domain D3868_01545 PF01084 Ribosomal protein S18 D3868_01550 PF01250 Ribosomal protein S6 D3868_01555 PF00698 Acyl transferase domain D3868_01565 PF00550 Phosphopantetheine attachment site D3868_01570 PF00109 Beta-ketoacyl synthase, N-terminal domain D3868_01570 PF02801 Beta-ketoacyl synthase, C-terminal domain D3868_01575 PF02618 YceG-like family D3868_01585 PF01464 Transglycosylase SLT domain D3868_01590 PF00701 Dihydrodipicolinate synthetase family D3868_01595 PF01668 SmpB protein D3868_01600 PF05175 Methyltransferase small domain D3868_01600 PF08468 Methyltransferase small domain N-terminal D3868_01610 PF01161 Phosphatidylethanolamine-binding protein D3868_01615 PF00490 Delta-aminolevulinic acid dehydratase D3868_01620 PF00149 Calcineurin-like phosphoesterase D3868_01625 PF00781 Diacylglycerol kinase catalytic domain D3868_01630 PF00378 Enoyl-CoA hydratase/isomerase D3868_01635 PF12802 MarR family D3868_01640 PF12399 Branched-chain amino acid ATP-binding cassette transporter D3868_01640 PF00005 ABC transporter D3868_01645 PF00005 ABC transporter D3868_01655 PF02653 Branched-chain amino acid transport system / permease component D3868_01670 PF05222 Alanine dehydrogenase/PNT, N-terminal domain D3868_01670 PF01262 Alanine dehydrogenase/PNT, C-terminal domain D3868_01680 PF02872 5'-nucleotidase, C-terminal domain D3868_01680 PF00149 Calcineurin-like phosphoesterase D3868_01685 PF00117 Glutamine amidotransferase class-I D3868_01690 PF02348 Cytidylyltransferase D3868_01695 PF13478 XdhC Rossmann domain D3868_01695 PF02625 XdhC and CoxI family D3868_01710 PF02861 Clp amino terminal domain, pathogenicity island component D3868_01710 PF17871 AAA lid domain D3868_01710 PF07724 AAA domain (Cdc48 subfamily) D3868_01710 PF00004 ATPase family associated with various cellular activities (AAA) D3868_01710 PF10431 C-terminal, D2-small domain, of ClpB protein D3868_01715 PF00941 FAD binding domain in molybdopterin dehydrogenase D3868_01715 PF03450 CO dehydrogenase flavoprotein C-terminal domain D3868_01720 PF01315 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain D3868_01720 PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase D3868_01725 PF00111 2Fe-2S iron-sulfur cluster binding domain D3868_01725 PF01799 [2Fe-2S] binding domain D3868_01730 PF16868 NMT1-like family D3868_01760 PF00850 Histone deacetylase domain D3868_01805 PF01502 Phosphoribosyl-AMP cyclohydrolase D3868_01810 PF01053 Cys/Met metabolism PLP-dependent enzyme D3868_01815 PF00497 Bacterial extracellular solute-binding proteins, family 3 D3868_01820 PF00528 Binding-protein-dependent transport system inner membrane component D3868_01825 PF00528 Binding-protein-dependent transport system inner membrane component D3868_01830 PF00005 ABC transporter D3868_01835 PF00155 Aminotransferase class I and II D3868_01855 PF00581 Rhodanese-like domain D3868_01860 PF01411 tRNA synthetases class II (A) D3868_01860 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain D3868_01860 PF02272 DHHA1 domain D3868_01865 PF00571 CBS domain D3868_01865 PF00291 Pyridoxal-phosphate dependent enzyme D3868_01870 PF00293 NUDIX domain D3868_01875 PF00595 PDZ domain D3868_01875 PF13180 PDZ domain D3868_01910 PF02321 Outer membrane efflux protein D3868_01920 PF00133 tRNA synthetases class I (I, L, M and V) D3868_01920 PF08264 Anticodon-binding domain of tRNA D3868_01920 PF10458 Valyl tRNA synthetase tRNA binding arm D3868_01925 PF00672 HAMP domain D3868_01925 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain D3868_01935 PF05036 Sporulation related domain D3868_01935 PF03330 Lytic transglycolase D3868_01940 PF00768 D-alanyl-D-alanine carboxypeptidase D3868_01940 PF07943 Penicillin-binding protein 5, C-terminal domain D3868_01945 PF02223 Thymidylate kinase D3868_01950 PF09115 DNA polymerase III, delta subunit, C terminal D3868_01955 PF09334 tRNA synthetases class I (M) D3868_01955 PF08264 Anticodon-binding domain of tRNA D3868_01960 PF01026 TatD related DNase D3868_01965 PF03099 Biotin/lipoate A/B protein ligase family D3868_01965 PF12706 Beta-lactamase superfamily domain D3868_01990 PF04371 Porphyromonas-type peptidyl-arginine deiminase D3868_01995 PF00528 Binding-protein-dependent transport system inner membrane component D3868_02000 PF00528 Binding-protein-dependent transport system inner membrane component D3868_02005 PF08402 TOBE domain D3868_02005 PF00005 ABC transporter D3868_02010 PF13416 Bacterial extracellular solute-binding protein D3868_02015 PF00120 Glutamine synthetase, catalytic domain D3868_02020 PF01266 FAD dependent oxidoreductase D3868_02050 PF03741 Integral membrane protein TerC family D3868_02055 PF00216 Bacterial DNA-binding protein D3868_02060 PF05443 ROS/MUCR transcriptional regulator protein D3868_02070 PF00140 Sigma-70 factor, region 1.2 D3868_02070 PF04542 Sigma-70 region 2 D3868_02070 PF04545 Sigma-70, region 4 D3868_02095 PF01810 LysE type translocator D3868_02105 PF02391 MoaE protein D3868_02110 PF02597 ThiS family D3868_02115 PF00994 Probable molybdopterin binding domain D3868_02115 PF03454 MoeA C-terminal region (domain IV) D3868_02115 PF03453 MoeA N-terminal region (domain I and II) D3868_02120 PF03205 Molybdopterin guanine dinucleotide synthesis protein B D3868_02125 PF01066 CDP-alcohol phosphatidyltransferase D3868_02130 PF12826 Helix-hairpin-helix motif D3868_02130 PF02151 UvrB/uvrC motif D3868_02130 PF01541 GIY-YIG catalytic domain D3868_02130 PF08459 UvrC Helix-hairpin-helix N-terminal D3868_02175 PF13193 AMP-binding enzyme C-terminal domain D3868_02175 PF00501 AMP-binding enzyme D3868_02175 PF00550 Phosphopantetheine attachment site D3868_02180 PF05681 Fumarate hydratase (Fumerase) D3868_02180 PF05683 Fumarase C-terminus D3868_02185 PF01926 50S ribosome-binding GTPase D3868_02185 PF14714 KH-domain-like of EngA bacterial GTPase enzymes, C-terminal D3868_02215 PF00196 Bacterial regulatory proteins, luxR family D3868_02215 PF00072 Response regulator receiver domain D3868_02230 PF02705 K+ potassium transporter D3868_02240 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) D3868_02240 PF00672 HAMP domain D3868_02240 PF00072 Response regulator receiver domain D3868_02240 PF01627 Hpt domain D3868_02240 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase D3868_02240 PF00512 His Kinase A (phospho-acceptor) domain D3868_02245 PF00672 HAMP domain D3868_02245 PF02743 Cache domain D3868_02245 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain D3868_02255 PF00990 Diguanylate cyclase, GGDEF domain D3868_02255 PF00072 Response regulator receiver domain D3868_02260 PF00155 Aminotransferase class I and II D3868_02265 PF03186 CobD/Cbib protein D3868_02270 PF16653 Saccharopine dehydrogenase C-terminal domain D3868_02270 PF03435 Saccharopine dehydrogenase NADP binding domain D3868_02285 PF03079 ARD/ARD' family D3868_02290 PF07690 Major Facilitator Superfamily D3868_02305 PF13411 MerR HTH family regulatory protein D3868_02310 PF00501 AMP-binding enzyme D3868_02310 PF13193 AMP-binding enzyme C-terminal domain D3868_02340 PF00005 ABC transporter D3868_02345 PF00009 Elongation factor Tu GTP binding domain D3868_02350 PF01507 Phosphoadenosine phosphosulfate reductase family D3868_02355 PF01507 Phosphoadenosine phosphosulfate reductase family D3868_02360 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases D3868_02360 PF14824 Sirohaem biosynthesis protein central D3868_02360 PF10414 Sirohaem synthase dimerisation region D3868_02365 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases D3868_02375 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain D3868_02375 PF01077 Nitrite and sulphite reductase 4Fe-4S domain D3868_02390 PF02254 TrkA-N domain D3868_02390 PF00999 Sodium/hydrogen exchanger family D3868_02405 PF13411 MerR HTH family regulatory protein D3868_02410 PF00216 Bacterial DNA-binding protein D3868_02415 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal D3868_02415 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III D3868_02420 PF02504 Fatty acid synthesis protein D3868_02425 PF01783 Ribosomal L32p protein family D3868_02445 PF03030 Inorganic H+ pyrophosphatase D3868_02455 PF00586 AIR synthase related protein, N-terminal domain D3868_02455 PF02769 AIR synthase related protein, C-terminal domain D3868_02460 PF01029 NusB family D3868_02465 PF00885 6,7-dimethyl-8-ribityllumazine synthase D3868_02470 PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase D3868_02470 PF00925 GTP cyclohydrolase II D3868_02475 PF00677 Lumazine binding domain D3868_02480 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region D3868_02480 PF01872 RibD C-terminal domain D3868_02485 PF03477 ATP cone domain D3868_02490 PF00464 Serine hydroxymethyltransferase D3868_02495 PF02502 Ribose/Galactose Isomerase D3868_02500 PF05443 ROS/MUCR transcriptional regulator protein D3868_02515 PF05974 Domain of unknown function (DUF892) D3868_02535 PF13673 Acetyltransferase (GNAT) domain D3868_02545 PF01068 ATP dependent DNA ligase domain D3868_02545 PF04675 DNA ligase N terminus D3868_02545 PF04679 ATP dependent DNA ligase C terminal region D3868_02555 PF04227 Indigoidine synthase A like protein D3868_02565 PF01048 Phosphorylase superfamily D3868_02615 PF00325 Bacterial regulatory proteins, crp family D3868_02615 PF00027 Cyclic nucleotide-binding domain D3868_02625 PF13545 Crp-like helix-turn-helix domain D3868_02625 PF00027 Cyclic nucleotide-binding domain D3868_02635 PF04140 Isoprenylcysteine carboxyl methyltransferase (ICMT) family D3868_02640 PF00195 Chalcone and stilbene synthases, N-terminal domain D3868_02640 PF02797 Chalcone and stilbene synthases, C-terminal domain D3868_02660 PF00872 Transposase, Mutator family D3868_02665 PF17191 RecG wedge domain D3868_02665 PF00270 DEAD/DEAH box helicase D3868_02665 PF00271 Helicase conserved C-terminal domain D3868_02670 PF07685 CobB/CobQ-like glutamine amidotransferase domain D3868_02670 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain D3868_02675 PF02572 ATP:corrinoid adenosyltransferase BtuR/CobO/CobP D3868_02675 PF12557 Cob(I)alamin adenosyltransferase N terminal D3868_02680 PF02283 Cobinamide kinase / cobinamide phosphate guanyltransferase D3868_02710 PF00472 RF-1 domain D3868_02730 PF02559 CarD-like/TRCF domain D3868_02730 PF00270 DEAD/DEAH box helicase D3868_02730 PF00271 Helicase conserved C-terminal domain D3868_02730 PF03461 TRCF domain D3868_02730 PF17757 UvrB interaction domain D3868_02740 PF00378 Enoyl-CoA hydratase/isomerase D3868_02750 PF12867 DinB superfamily D3868_02750 PF03781 Sulfatase-modifying factor enzyme 1 D3868_02770 PF07992 Pyridine nucleotide-disulphide oxidoreductase D3868_02770 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain D3868_02775 PF05067 Manganese containing catalase D3868_02780 PF07690 Major Facilitator Superfamily D3868_02785 PF01474 Class-II DAHP synthetase family D3868_02795 PF00171 Aldehyde dehydrogenase family D3868_02800 PF02569 Pantoate-beta-alanine ligase D3868_02830 PF13419 Haloacid dehalogenase-like hydrolase D3868_02835 PF12804 MobA-like NTP transferase domain D3868_02835 PF00132 Bacterial transferase hexapeptide (six repeats) D3868_02835 PF14602 Hexapeptide repeat of succinyl-transferase D3868_02840 PF01380 SIS domain D3868_02845 PF05951 Bacterial protein of unknown function (DUF882) D3868_02855 PF00301 Rubredoxin D3868_02870 PF01734 Patatin-like phospholipase D3868_02875 PF01728 FtsJ-like methyltransferase D3868_02875 PF18125 RlmM ferredoxin-like domain D3868_02900 PF00196 Bacterial regulatory proteins, luxR family D3868_02900 PF00072 Response regulator receiver domain D3868_02905 PF00989 PAS fold D3868_02905 PF00512 His Kinase A (phospho-acceptor) domain D3868_02905 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase D3868_02910 PF03480 Bacterial extracellular solute-binding protein, family 7 D3868_02915 PF04290 Tripartite ATP-independent periplasmic transporters, DctQ component D3868_02920 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component D3868_02925 PF03831 PhnA domain D3868_02925 PF08274 PhnA Zinc-Ribbon D3868_02930 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain D3868_02940 PF04879 Molybdopterin oxidoreductase Fe4S4 domain D3868_02940 PF00384 Molybdopterin oxidoreductase D3868_02940 PF01568 Molydopterin dinucleotide binding domain D3868_02945 PF03060 Nitronate monooxygenase D3868_02950 PF00990 Diguanylate cyclase, GGDEF domain D3868_02965 PF02965 Vitamin B12 dependent methionine synthase, activation domain D3868_02965 PF02310 B12 binding domain D3868_02965 PF02607 B12 binding domain D3868_02965 PF00809 Pterin binding enzyme D3868_02965 PF02574 Homocysteine S-methyltransferase D3868_02975 PF02219 Methylenetetrahydrofolate reductase D3868_02980 PF03551 Transcriptional regulator PadR-like family D3868_02980 PF13847 Methyltransferase domain D3868_02985 PF04333 MlaA lipoprotein D3868_03000 PF00005 ABC transporter D3868_03000 PF12848 ABC transporter D3868_03005 PF02639 Uncharacterized BCR, YaiI/YqxD family COG1671 D3868_03010 PF00929 Exonuclease D3868_03030 PF00210 Ferritin-like domain D3868_03035 PF02446 4-alpha-glucanotransferase D3868_03040 PF00486 Transcriptional regulatory protein, C terminal D3868_03040 PF00072 Response regulator receiver domain D3868_03045 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) D3868_03045 PF00128 Alpha amylase, catalytic domain D3868_03050 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) D3868_03050 PF02806 Alpha amylase, C-terminal all-beta domain D3868_03050 PF00128 Alpha amylase, catalytic domain D3868_03055 PF16657 Maltogenic Amylase, C-terminal domain D3868_03055 PF00128 Alpha amylase, catalytic domain D3868_03070 PF00459 Inositol monophosphatase family D3868_03075 PF04305 Protein of unknown function (DUF455) D3868_03090 PF02771 Acyl-CoA dehydrogenase, N-terminal domain D3868_03090 PF02770 Acyl-CoA dehydrogenase, middle domain D3868_03090 PF00441 Acyl-CoA dehydrogenase, C-terminal domain D3868_03100 PF00501 AMP-binding enzyme D3868_03100 PF13193 AMP-binding enzyme C-terminal domain D3868_03105 PF00325 Bacterial regulatory proteins, crp family D3868_03105 PF00027 Cyclic nucleotide-binding domain D3868_03110 PF03781 Sulfatase-modifying factor enzyme 1 D3868_03115 PF00211 Adenylate and Guanylate cyclase catalytic domain D3868_03130 PF01389 OmpA-like transmembrane domain D3868_03130 PF00691 OmpA family D3868_03150 PF00027 Cyclic nucleotide-binding domain D3868_03150 PF13545 Crp-like helix-turn-helix domain D3868_03160 PF12802 MarR family D3868_03165 PF00561 alpha/beta hydrolase fold D3868_03180 PF01209 ubiE/COQ5 methyltransferase family D3868_03200 PF00271 Helicase conserved C-terminal domain D3868_03200 PF08494 DEAD/H associated D3868_03200 PF00270 DEAD/DEAH box helicase D3868_03210 PF02469 Fasciclin domain D3868_03215 PF03441 FAD binding domain of DNA photolyase D3868_03215 PF00875 DNA photolyase D3868_03225 PF01475 Ferric uptake regulator family D3868_03230 PF02492 CobW/HypB/UreG, nucleotide-binding domain D3868_03230 PF07683 Cobalamin synthesis protein cobW C-terminal domain D3868_03240 PF00535 Glycosyl transferase family 2 D3868_03245 PF03600 Citrate transporter D3868_03250 PF12706 Beta-lactamase superfamily domain D3868_03260 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain D3868_03260 PF00672 HAMP domain D3868_03260 PF12729 Four helix bundle sensory module for signal transduction D3868_03265 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain D3868_03265 PF00672 HAMP domain D3868_03265 PF13426 PAS domain D3868_03270 PF01545 Cation efflux family D3868_03270 PF16916 Dimerisation domain of Zinc Transporter D3868_03275 PF10590 Pyridoxine 5'-phosphate oxidase C-terminal dimerisation region D3868_03275 PF01243 Pyridoxamine 5'-phosphate oxidase D3868_03280 PF05433 Glycine zipper 2TM domain D3868_03280 PF16998 17 kDa outer membrane surface antigen D3868_03285 PF00226 DnaJ domain D3868_03285 PF00684 DnaJ central domain D3868_03285 PF01556 DnaJ C terminal domain D3868_03290 PF01434 Peptidase family M41 D3868_03290 PF00004 ATPase family associated with various cellular activities (AAA) D3868_03290 PF06480 FtsH Extracellular D3868_03290 PF17862 AAA+ lid domain D3868_03305 PF00072 Response regulator receiver domain D3868_03305 PF00486 Transcriptional regulatory protein, C terminal D3868_03310 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase D3868_03310 PF00512 His Kinase A (phospho-acceptor) domain D3868_03310 PF00497 Bacterial extracellular solute-binding proteins, family 3 D3868_03315 PF09345 Domain of unknown function (DUF1987) D3868_03325 PF11849 Domain of unknown function (DUF3369) D3868_03350 PF00893 Small Multidrug Resistance protein D3868_03355 PF00106 short chain dehydrogenase D3868_03360 PF02566 OsmC-like protein D3868_03370 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) D3868_03380 PF00892 EamA-like transporter family D3868_03385 PF00733 Asparagine synthase D3868_03385 PF13537 Glutamine amidotransferase domain D3868_03395 PF01370 NAD dependent epimerase/dehydratase family D3868_03400 PF00534 Glycosyl transferases group 1 D3868_03400 PF13477 Glycosyl transferase 4-like D3868_03405 PF00953 Glycosyl transferase family 4 D3868_03410 PF01370 NAD dependent epimerase/dehydratase family D3868_03425 PF00691 OmpA family D3868_03430 PF07676 WD40-like Beta Propeller Repeat D3868_03430 PF04052 TolB amino-terminal domain D3868_03440 PF02472 Biopolymer transport protein ExbD/TolR D3868_03445 PF01618 MotA/TolQ/ExbB proton channel family D3868_03450 PF03061 Thioesterase superfamily D3868_03455 PF05491 RuvB C-terminal winged helix domain D3868_03455 PF05496 Holliday junction DNA helicase RuvB P-loop domain D3868_03455 PF17864 RuvB AAA lid domain D3868_03460 PF07499 RuvA, C-terminal domain D3868_03460 PF01330 RuvA N terminal domain D3868_03465 PF02075 Crossover junction endodeoxyribonuclease RuvC D3868_03470 PF01709 Transcriptional regulator D3868_03475 PF13277 YmdB-like protein D3868_03480 PF01812 5-formyltetrahydrofolate cyclo-ligase family D3868_03500 PF02779 Transketolase, pyrimidine binding domain D3868_03500 PF00456 Transketolase, thiamine diphosphate binding domain D3868_03500 PF02780 Transketolase, C-terminal domain D3868_03505 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain D3868_03505 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain D3868_03525 PF01791 DeoC/LacD family aldolase D3868_03530 PF02581 Thiamine monophosphate synthase D3868_03535 PF01925 Sulfite exporter TauE/SafE D3868_03540 PF03349 Outer membrane protein transport protein (OMPP1/FadL/TodX) D3868_03545 PF00107 Zinc-binding dehydrogenase D3868_03545 PF08240 Alcohol dehydrogenase GroES-like domain D3868_03550 PF00152 tRNA synthetases class II (D, K and N) D3868_03555 PF08207 Elongation factor P (EF-P) KOW-like domain D3868_03555 PF09285 Elongation factor P, C-terminal D3868_03555 PF01132 Elongation factor P (EF-P) OB domain D3868_03560 PF00459 Inositol monophosphatase family D3868_03575 PF00691 OmpA family D3868_03575 PF13677 Membrane MotB of proton-channel complex MotA/MotB D3868_03580 PF00266 Aminotransferase class-V D3868_03590 PF01597 Glycine cleavage H-protein D3868_03595 PF01571 Aminomethyltransferase folate-binding domain D3868_03595 PF08669 Glycine cleavage T-protein C-terminal barrel domain D3868_03610 PF02401 LytB protein D3868_03615 PF01636 Phosphotransferase enzyme family D3868_03620 PF00075 RNase H D3868_03625 PF13193 AMP-binding enzyme C-terminal domain D3868_03625 PF00501 AMP-binding enzyme D3868_03630 PF08534 Redoxin D3868_03635 PF11412 Disulphide bond corrector protein DsbC D3868_03635 PF02683 Cytochrome C biogenesis protein transmembrane region D3868_03640 PF02622 Uncharacterized ACR, COG1678 D3868_03650 PF13302 Acetyltransferase (GNAT) domain D3868_03655 PF05193 Peptidase M16 inactive domain D3868_03655 PF00675 Insulinase (Peptidase family M16) D3868_03660 PF00291 Pyridoxal-phosphate dependent enzyme D3868_03660 PF14821 Threonine synthase N terminus D3868_03670 PF02074 Carboxypeptidase Taq (M32) metallopeptidase D3868_03675 PF02104 SURF1 family D3868_03685 PF00510 Cytochrome c oxidase subunit III D3868_03690 PF04442 Cytochrome c oxidase assembly protein CtaG/Cox11 D3868_03695 PF01040 UbiA prenyltransferase family D3868_03700 PF00115 Cytochrome C and Quinol oxidase polypeptide I D3868_03705 PF02790 Cytochrome C oxidase subunit II, transmembrane domain D3868_03705 PF00116 Cytochrome C oxidase subunit II, periplasmic domain D3868_03715 PF01523 Putative modulator of DNA gyrase D3868_03720 PF08335 GlnD PII-uridylyltransferase D3868_03720 PF01842 ACT domain D3868_03720 PF01909 Nucleotidyltransferase domain D3868_03720 PF01966 HD domain D3868_03725 PF06082 Exopolysaccharide biosynthesis protein YbjH D3868_03735 PF07043 Protein of unknown function (DUF1328) D3868_03740 PF08281 Sigma-70, region 4 D3868_03740 PF04542 Sigma-70 region 2 D3868_03745 PF01464 Transglycosylase SLT domain D3868_03750 PF17843 MycE methyltransferase N-terminal D3868_03765 PF01212 Beta-eliminating lyase D3868_03775 PF00849 RNA pseudouridylate synthase D3868_03780 PF00140 Sigma-70 factor, region 1.2 D3868_03780 PF04542 Sigma-70 region 2 D3868_03780 PF04545 Sigma-70, region 4 D3868_03790 PF00069 Protein kinase domain D3868_03795 PF00709 Adenylosuccinate synthetase D3868_03800 PF13393 Histidyl-tRNA synthetase D3868_03810 PF02386 Cation transport protein D3868_03825 PF06463 Molybdenum Cofactor Synthesis C D3868_03825 PF04055 Radical SAM superfamily D3868_03830 PF03631 Virulence factor BrkB D3868_03845 PF01264 Chorismate synthase D3868_03855 PF00072 Response regulator receiver domain D3868_03855 PF00486 Transcriptional regulatory protein, C terminal D3868_03865 PF01343 Peptidase family S49 D3868_03875 PF01339 CheB methylesterase D3868_03875 PF01739 CheR methyltransferase, SAM binding domain D3868_03875 PF03705 CheR methyltransferase, all-alpha domain D3868_03875 PF08448 PAS fold D3868_03880 PF00072 Response regulator receiver domain D3868_03880 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase D3868_03880 PF00512 His Kinase A (phospho-acceptor) domain D3868_03880 PF18415 Histidine kinase receptor ArcB trans-membrane domain D3868_03880 PF01627 Hpt domain D3868_03880 PF00989 PAS fold D3868_03890 PF03649 Uncharacterised protein family (UPF0014) D3868_03895 PF12704 MacB-like periplasmic core domain D3868_03895 PF00005 ABC transporter D3868_03895 PF02687 FtsX-like permease family D3868_03900 PF07690 Major Facilitator Superfamily D3868_03905 PF01594 AI-2E family transporter D3868_03910 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase D3868_03910 PF00672 HAMP domain D3868_03910 PF00512 His Kinase A (phospho-acceptor) domain D3868_03915 PF00486 Transcriptional regulatory protein, C terminal D3868_03915 PF00072 Response regulator receiver domain D3868_03920 PF13180 PDZ domain D3868_03930 PF03144 Elongation factor Tu domain 2 D3868_03930 PF00009 Elongation factor Tu GTP binding domain D3868_03930 PF03764 Elongation factor G, domain IV D3868_03930 PF14492 Elongation Factor G, domain II D3868_03930 PF00679 Elongation factor G C-terminus D3868_03935 PF01042 Endoribonuclease L-PSP D3868_03945 PF01131 DNA topoisomerase D3868_03945 PF01751 Toprim domain D3868_03965 PF03552 Cellulose synthase D3868_03965 PF00535 Glycosyl transferase family 2 D3868_03965 PF07238 PilZ domain D3868_03975 PF10576 Iron-sulfur binding domain of endonuclease III D3868_03975 PF00633 Helix-hairpin-helix motif D3868_03975 PF00730 HhH-GPD superfamily base excision DNA repair protein D3868_03985 PF04434 SWIM zinc finger D3868_03985 PF00271 Helicase conserved C-terminal domain D3868_03985 PF00176 SNF2 family N-terminal domain D3868_04000 PF00583 Acetyltransferase (GNAT) family D3868_04000 PF00696 Amino acid kinase family D3868_04010 PF03979 Sigma-70 factor, region 1.1 D3868_04010 PF04539 Sigma-70 region 3 D3868_04010 PF04542 Sigma-70 region 2 D3868_04010 PF04545 Sigma-70, region 4 D3868_04010 PF00140 Sigma-70 factor, region 1.2 D3868_04010 PF04546 Sigma-70, non-essential region D3868_04015 PF01807 CHC2 zinc finger D3868_04015 PF08275 DNA primase catalytic core, N-terminal domain D3868_04015 PF08278 DNA primase DnaG DnaB-binding D3868_04015 PF10410 DnaB-helicase binding domain of primase D3868_04015 PF13662 Toprim domain D3868_04025 PF00117 Glutamine amidotransferase class-I D3868_04025 PF00988 Carbamoyl-phosphate synthase small chain, CPSase domain D3868_04030 PF08448 PAS fold D3868_04030 PF13188 PAS domain D3868_04030 PF00072 Response regulator receiver domain D3868_04030 PF00512 His Kinase A (phospho-acceptor) domain D3868_04030 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase D3868_04045 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain D3868_04045 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain D3868_04050 PF03960 ArsC family D3868_04055 PF05175 Methyltransferase small domain D3868_04060 PF00814 Glycoprotease family D3868_04060 PF00583 Acetyltransferase (GNAT) family D3868_04070 PF01066 CDP-alcohol phosphatidyltransferase D3868_04075 PF02666 Phosphatidylserine decarboxylase D3868_04100 PF00180 Isocitrate/isopropylmalate dehydrogenase D3868_04110 PF06055 Exopolysaccharide synthesis, ExoD D3868_04125 PF04542 Sigma-70 region 2 D3868_04125 PF08281 Sigma-70, region 4 D3868_04130 PF00180 Isocitrate/isopropylmalate dehydrogenase D3868_04130 PF18324 Hypothetical protein TT1725 D3868_04160 PF13291 ACT domain D3868_04160 PF04607 Region found in RelA / SpoT proteins D3868_04160 PF02824 TGS domain D3868_04165 PF12801 4Fe-4S binding domain D3868_04165 PF11614 IG-like fold at C-terminal of FixG, putative oxidoreductase D3868_04165 PF13746 4Fe-4S dicluster domain D3868_04180 PF13291 ACT domain D3868_04180 PF00291 Pyridoxal-phosphate dependent enzyme D3868_04195 PF02272 DHHA1 domain D3868_04195 PF01411 tRNA synthetases class II (A) D3868_04195 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain D3868_04200 PF00154 recA bacterial DNA recombination protein D3868_04210 PF00072 Response regulator receiver domain D3868_04210 PF13188 PAS domain D3868_04210 PF08448 PAS fold D3868_04210 PF00512 His Kinase A (phospho-acceptor) domain D3868_04210 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase D3868_04215 PF01312 FlhB HrpN YscU SpaS Family D3868_04220 PF01311 Bacterial export proteins, family 1 D3868_04225 PF01313 Bacterial export proteins, family 3 D3868_04230 PF02049 Flagellar hook-basal body complex protein FliE D3868_04235 PF06429 Flagellar basal body rod FlgEFG protein C-terminal D3868_04240 PF00460 Flagella basal body rod protein D3868_04245 PF01312 FlhB HrpN YscU SpaS Family D3868_04260 PF00813 FliP family D3868_04265 PF02705 K+ potassium transporter D3868_04275 PF00691 OmpA family D3868_04275 PF13677 Membrane MotB of proton-channel complex MotA/MotB D3868_04305 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term D3868_04305 PF02154 Flagellar motor switch protein FliM D3868_04315 PF06429 Flagellar basal body rod FlgEFG protein C-terminal D3868_04315 PF00460 Flagella basal body rod protein D3868_04320 PF06429 Flagellar basal body rod FlgEFG protein C-terminal D3868_04320 PF00460 Flagella basal body rod protein D3868_04330 PF02107 Flagellar L-ring protein D3868_04335 PF17843 MycE methyltransferase N-terminal D3868_04340 PF01258 Prokaryotic dksA/traR C4-type zinc finger D3868_04345 PF10768 Class II flagellar assembly regulator D3868_04350 PF02119 Flagellar P-ring protein D3868_04355 PF01832 Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase D3868_04355 PF10135 Rod binding protein D3868_04370 PF03963 Flagellar hook capping protein - N-terminal region D3868_04395 PF10119 Predicted methyltransferase regulatory domain D3868_04395 PF13847 Methyltransferase domain D3868_04405 PF00664 ABC transporter transmembrane region D3868_04405 PF00005 ABC transporter D3868_04410 PF01197 Ribosomal protein L31 D3868_04420 PF00011 Hsp20/alpha crystallin family D3868_04425 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase D3868_04425 PF13188 PAS domain D3868_04425 PF00512 His Kinase A (phospho-acceptor) domain D3868_04425 PF00989 PAS fold D3868_04430 PF00561 alpha/beta hydrolase fold D3868_04430 PF00364 Biotin-requiring enzyme D3868_04435 PF01053 Cys/Met metabolism PLP-dependent enzyme D3868_04440 PF04107 Glutamate-cysteine ligase family 2(GCS2) D3868_04455 PF07729 FCD domain D3868_04455 PF00392 Bacterial regulatory proteins, gntR family D3868_04460 PF05191 Adenylate kinase, active site lid D3868_04465 PF00344 SecY translocase D3868_04470 PF00828 Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27A D3868_04475 PF00327 Ribosomal protein L30p/L7e D3868_04480 PF03719 Ribosomal protein S5, C-terminal domain D3868_04480 PF00333 Ribosomal protein S5, N-terminal domain D3868_04485 PF00861 Ribosomal L18 of archaea, bacteria, mitoch. and chloroplast D3868_04490 PF00347 Ribosomal protein L6 D3868_04495 PF00410 Ribosomal protein S8 D3868_04500 PF00253 Ribosomal protein S14p/S29e D3868_04505 PF00281 Ribosomal protein L5 D3868_04505 PF00673 ribosomal L5P family C-terminus D3868_04510 PF17136 Ribosomal proteins 50S L24/mitochondrial 39S L24 D3868_04510 PF00467 KOW motif D3868_04515 PF00238 Ribosomal protein L14p/L23e D3868_04520 PF00366 Ribosomal protein S17 D3868_04525 PF00831 Ribosomal L29 protein D3868_04530 PF00252 Ribosomal protein L16p/L10e D3868_04535 PF00189 Ribosomal protein S3, C-terminal domain D3868_04535 PF07650 KH domain D3868_04540 PF00237 Ribosomal protein L22p/L17e D3868_04545 PF00203 Ribosomal protein S19 D3868_04550 PF03947 Ribosomal Proteins L2, C-terminal domain D3868_04550 PF00181 Ribosomal Proteins L2, RNA binding domain D3868_04555 PF00276 Ribosomal protein L23 D3868_04560 PF00573 Ribosomal protein L4/L1 family D3868_04565 PF00297 Ribosomal protein L3 D3868_04570 PF00338 Ribosomal protein S10p/S20e D3868_04575 PF03143 Elongation factor Tu C-terminal domain D3868_04575 PF03144 Elongation factor Tu domain 2 D3868_04575 PF00009 Elongation factor Tu GTP binding domain D3868_04580 PF03144 Elongation factor Tu domain 2 D3868_04580 PF00679 Elongation factor G C-terminus D3868_04580 PF14492 Elongation Factor G, domain II D3868_04580 PF03764 Elongation factor G, domain IV D3868_04580 PF00009 Elongation factor Tu GTP binding domain D3868_04585 PF00177 Ribosomal protein S7p/S5e D3868_04590 PF00164 Ribosomal protein S12/S23 D3868_04595 PF01965 DJ-1/PfpI family D3868_04600 PF04997 RNA polymerase Rpb1, domain 1 D3868_04600 PF04998 RNA polymerase Rpb1, domain 5 D3868_04600 PF05000 RNA polymerase Rpb1, domain 4 D3868_04600 PF04983 RNA polymerase Rpb1, domain 3 D3868_04600 PF00623 RNA polymerase Rpb1, domain 2 D3868_04605 PF00562 RNA polymerase Rpb2, domain 6 D3868_04605 PF10385 RNA polymerase beta subunit external 1 domain D3868_04605 PF04565 RNA polymerase Rpb2, domain 3 D3868_04605 PF04563 RNA polymerase beta subunit D3868_04605 PF04561 RNA polymerase Rpb2, domain 2 D3868_04605 PF04560 RNA polymerase Rpb2, domain 7 D3868_04610 PF00542 Ribosomal protein L7/L12 C-terminal domain D3868_04610 PF16320 Ribosomal protein L7/L12 dimerisation domain D3868_04615 PF00466 Ribosomal protein L10 D3868_04620 PF00687 Ribosomal protein L1p/L10e family D3868_04625 PF03946 Ribosomal protein L11, N-terminal domain D3868_04625 PF00298 Ribosomal protein L11, RNA binding domain D3868_04630 PF02357 Transcription termination factor nusG D3868_04630 PF00467 KOW motif D3868_04645 PF03143 Elongation factor Tu C-terminal domain D3868_04645 PF03144 Elongation factor Tu domain 2 D3868_04645 PF00009 Elongation factor Tu GTP binding domain D3868_04660 PF00588 SpoU rRNA Methylase family D3868_04660 PF08032 RNA 2'-O ribose methyltransferase substrate binding D3868_04695 PF13458 Periplasmic binding protein D3868_04705 PF00005 ABC transporter D3868_04705 PF12399 Branched-chain amino acid ATP-binding cassette transporter D3868_04710 PF00005 ABC transporter D3868_04720 PF03633 Glycosyl hydrolase family 65, C-terminal domain D3868_04720 PF03632 Glycosyl hydrolase family 65 central catalytic domain D3868_04720 PF02358 Trehalose-phosphatase D3868_04720 PF03636 Glycosyl hydrolase family 65, N-terminal domain D3868_04735 PF00480 ROK family D3868_04750 PF01546 Peptidase family M20/M25/M40 D3868_04750 PF07687 Peptidase dimerisation domain D3868_04755 PF00005 ABC transporter D3868_04760 PF12399 Branched-chain amino acid ATP-binding cassette transporter D3868_04760 PF00005 ABC transporter D3868_04770 PF02653 Branched-chain amino acid transport system / permease component D3868_04795 PF02894 Oxidoreductase family, C-terminal alpha/beta domain D3868_04795 PF01408 Oxidoreductase family, NAD-binding Rossmann fold D3868_04805 PF00005 ABC transporter D3868_04815 PF00528 Binding-protein-dependent transport system inner membrane component D3868_04820 PF17926 Tetracyclin repressor-like, C-terminal domain D3868_04820 PF00440 Bacterial regulatory proteins, tetR family D3868_04830 PF03781 Sulfatase-modifying factor enzyme 1 D3868_04850 PF16177 Acetyl-coenzyme A synthetase N-terminus D3868_04850 PF00501 AMP-binding enzyme D3868_04850 PF13193 AMP-binding enzyme C-terminal domain D3868_04860 PF00005 ABC transporter D3868_04885 PF03062 MBOAT, membrane-bound O-acyltransferase family D3868_04895 PF00905 Penicillin binding protein transpeptidase domain D3868_04895 PF00912 Transglycosylase D3868_04895 PF17092 Penicillin-binding protein OB-like domain D3868_04900 PF01520 N-acetylmuramoyl-L-alanine amidase D3868_04900 PF11741 AMIN domain D3868_04905 PF12111 Polyribonucleotide phosphorylase C terminal D3868_04905 PF10150 Ribonuclease E/G family D3868_04905 PF00575 S1 RNA binding domain D3868_04910 PF03449 Transcription elongation factor, N-terminal D3868_04910 PF01272 Transcription elongation factor, GreA/GreB, C-term D3868_04940 PF04107 Glutamate-cysteine ligase family 2(GCS2) D3868_04945 PF04452 RNA methyltransferase D3868_04950 PF01040 UbiA prenyltransferase family D3868_04970 PF01977 3-octaprenyl-4-hydroxybenzoate carboxy-lyase D3868_04985 PF01523 Putative modulator of DNA gyrase D3868_04995 PF00781 Diacylglycerol kinase catalytic domain D3868_05005 PF00534 Glycosyl transferases group 1 D3868_05005 PF13439 Glycosyltransferase Family 4 D3868_05015 PF04413 3-Deoxy-D-manno-octulosonic-acid transferase (kdotransferase) D3868_05020 PF02606 Tetraacyldisaccharide-1-P 4'-kinase D3868_05030 PF01810 LysE type translocator D3868_05055 PF02515 CoA-transferase family III D3868_05065 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region D3868_05090 PF01814 Hemerythrin HHE cation binding domain D3868_05095 PF08471 Class II vitamin B12-dependent ribonucleotide reductase D3868_05095 PF02867 Ribonucleotide reductase, barrel domain D3868_05125 PF05036 Sporulation related domain D3868_05125 PF03330 Lytic transglycolase D3868_05130 PF00106 short chain dehydrogenase D3868_05135 PF01575 MaoC like domain D3868_05140 PF06574 FAD synthetase D3868_05140 PF01687 Riboflavin kinase D3868_05145 PF00156 Phosphoribosyl transferase domain D3868_05150 PF00133 tRNA synthetases class I (I, L, M and V) D3868_05150 PF08264 Anticodon-binding domain of tRNA D3868_05155 PF01252 Signal peptidase (SPase) II D3868_05165 PF00675 Insulinase (Peptidase family M16) D3868_05165 PF05193 Peptidase M16 inactive domain D3868_05170 PF05193 Peptidase M16 inactive domain D3868_05180 PF00342 Phosphoglucose isomerase D3868_05220 PF00474 Sodium:solute symporter family D3868_05225 PF00571 CBS domain D3868_05225 PF00478 IMP dehydrogenase / GMP reductase domain D3868_05235 PF01979 Amidohydrolase family D3868_05250 PF00005 ABC transporter D3868_05260 PF09084 NMT1/THI5 like D3868_05265 PF03781 Sulfatase-modifying factor enzyme 1 D3868_05270 PF00884 Sulfatase D3868_05275 PF03328 HpcH/HpaI aldolase/citrate lyase family D3868_05285 PF00561 alpha/beta hydrolase fold D3868_05290 PF01557 Fumarylacetoacetate (FAA) hydrolase family D3868_05295 PF00392 Bacterial regulatory proteins, gntR family D3868_05295 PF07702 UTRA domain D3868_05300 PF00248 Aldo/keto reductase family D3868_05320 PF01593 Flavin containing amine oxidoreductase D3868_05325 PF00109 Beta-ketoacyl synthase, N-terminal domain D3868_05325 PF02801 Beta-ketoacyl synthase, C-terminal domain D3868_05360 PF07977 FabA-like domain D3868_05370 PF00550 Phosphopantetheine attachment site D3868_05375 PF00550 Phosphopantetheine attachment site D3868_05405 PF00440 Bacterial regulatory proteins, tetR family D3868_05410 PF09827 CRISPR associated protein Cas2 D3868_05415 PF01867 CRISPR associated protein Cas1 D3868_05435 PF09704 CRISPR-associated protein (Cas_Cas5) D3868_05445 PF00144 Beta-lactamase D3868_05450 PF00497 Bacterial extracellular solute-binding proteins, family 3 D3868_05455 PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase D3868_05460 PF00128 Alpha amylase, catalytic domain D3868_05460 PF16657 Maltogenic Amylase, C-terminal domain D3868_05475 PF00849 RNA pseudouridylate synthase D3868_05475 PF01479 S4 domain D3868_05480 PF07311 Dodecin D3868_05485 PF14437 MafB19-like deaminase D3868_05495 PF01071 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain D3868_05495 PF02843 Phosphoribosylglycinamide synthetase, C domain D3868_05495 PF02844 Phosphoribosylglycinamide synthetase, N domain D3868_05500 PF02601 Exonuclease VII, large subunit D3868_05500 PF13742 OB-fold nucleic acid binding domain D3868_05510 PF01979 Amidohydrolase family D3868_05515 PF13393 Histidyl-tRNA synthetase D3868_05515 PF03129 Anticodon binding domain D3868_05535 PF00210 Ferritin-like domain D3868_05555 PF00994 Probable molybdopterin binding domain D3868_05555 PF02464 Competence-damaged protein D3868_05560 PF03749 Sugar fermentation stimulation protein RE domain D3868_05560 PF17746 SfsA N-terminal OB domain D3868_05570 PF04002 RadC-like JAB domain D3868_05580 PF00563 EAL domain D3868_05580 PF00990 Diguanylate cyclase, GGDEF domain D3868_05580 PF03707 Bacterial signalling protein N terminal repeat D3868_05585 PF10397 Adenylosuccinate lyase C-terminus D3868_05585 PF00206 Lyase D3868_05600 PF01259 SAICAR synthetase D3868_05605 PF02700 Phosphoribosylformylglycinamidine (FGAM) synthase D3868_05610 PF02805 Metal binding domain of Ada D3868_05610 PF00730 HhH-GPD superfamily base excision DNA repair protein D3868_05610 PF12833 Helix-turn-helix domain D3868_05610 PF06029 AlkA N-terminal domain D3868_05615 PF03473 MOSC domain D3868_05615 PF03475 3-alpha domain D3868_05625 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family D3868_05625 PF03466 LysR substrate binding domain D3868_05635 PF00586 AIR synthase related protein, N-terminal domain D3868_05635 PF02769 AIR synthase related protein, C-terminal domain D3868_05635 PF18072 Formylglycinamide ribonucleotide amidotransferase linker domain D3868_05645 PF00462 Glutaredoxin D3868_05655 PF00892 EamA-like transporter family D3868_05665 PF00724 NADH:flavin oxidoreductase / NADH oxidase family D3868_05675 PF01479 S4 domain D3868_05675 PF00163 Ribosomal protein S4/S9 N-terminal domain D3868_05690 PF04397 LytTr DNA-binding domain D3868_05700 PF08502 LeuA allosteric (dimerisation) domain D3868_05700 PF00682 HMGL-like D3868_05710 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase D3868_05710 PF00512 His Kinase A (phospho-acceptor) domain D3868_05720 PF01757 Acyltransferase family D3868_05725 PF09190 DALR domain D3868_05725 PF01406 tRNA synthetases class I (C) catalytic domain D3868_05730 PF00749 tRNA synthetases class I (E and Q), catalytic domain D3868_05735 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain D3868_05735 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain D3868_05735 PF00205 Thiamine pyrophosphate enzyme, central domain D3868_05745 PF02540 NAD synthase D3868_05745 PF00795 Carbon-nitrogen hydrolase D3868_05750 PF00355 Rieske [2Fe-2S] domain D3868_05765 PF00144 Beta-lactamase D3868_05775 PF00535 Glycosyl transferase family 2 D3868_05780 PF00672 HAMP domain D3868_05780 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain D3868_05795 PF02653 Branched-chain amino acid transport system / permease component D3868_05800 PF06508 Queuosine biosynthesis protein QueC D3868_05820 PF00005 ABC transporter D3868_05820 PF12399 Branched-chain amino acid ATP-binding cassette transporter D3868_05825 PF00005 ABC transporter D3868_05840 PF00829 Ribosomal prokaryotic L21 protein D3868_05845 PF01016 Ribosomal L27 protein D3868_05850 PF01018 GTP1/OBG D3868_05850 PF01926 50S ribosome-binding GTPase D3868_05855 PF01472 PUA domain D3868_05855 PF00696 Amino acid kinase family D3868_05860 PF13419 Haloacid dehalogenase-like hydrolase D3868_05875 PF01925 Sulfite exporter TauE/SafE D3868_05880 PF13442 Cytochrome C oxidase, cbb3-type, subunit III D3868_05880 PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase D3868_05880 PF00034 Cytochrome c D3868_05885 PF00171 Aldehyde dehydrogenase family D3868_05890 PF01467 Cytidylyltransferase-like D3868_05900 PF02590 Predicted SPOUT methyltransferase D3868_05905 PF06415 BPG-independent PGAM N-terminus (iPGM_N) D3868_05905 PF01676 Metalloenzyme superfamily D3868_05915 PF03572 Peptidase family S41 D3868_05915 PF13180 PDZ domain D3868_05925 PF00293 NUDIX domain D3868_05935 PF02823 ATP synthase, Delta/Epsilon chain, beta-sandwich domain D3868_05940 PF02874 ATP synthase alpha/beta family, beta-barrel domain D3868_05940 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain D3868_05945 PF00231 ATP synthase D3868_05950 PF02874 ATP synthase alpha/beta family, beta-barrel domain D3868_05950 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain D3868_05950 PF00306 ATP synthase alpha/beta chain, C terminal domain D3868_05955 PF00213 ATP synthase delta (OSCP) subunit D3868_05970 PF18074 Primosomal protein N C-terminal domain D3868_05970 PF17764 3′ DNA-binding domain (3′BD) D3868_05970 PF00270 DEAD/DEAH box helicase D3868_05970 PF18319 PriA DNA helicase Cys-rich region (CRR) domain D3868_05975 PF00923 Transaldolase/Fructose-6-phosphate aldolase D3868_05985 PF02899 Phage integrase, N-terminal SAM-like domain D3868_05985 PF00589 Phage integrase family D3868_05990 PF07992 Pyridine nucleotide-disulphide oxidoreductase D3868_05990 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain D3868_06000 PF00561 alpha/beta hydrolase fold D3868_06010 PF01467 Cytidylyltransferase-like D3868_06010 PF00294 pfkB family carbohydrate kinase D3868_06020 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase D3868_06020 PF00512 His Kinase A (phospho-acceptor) domain D3868_06030 PF13649 Methyltransferase domain D3868_06050 PF13649 Methyltransferase domain D3868_06055 PF00162 Phosphoglycerate kinase D3868_06060 PF13662 Toprim domain D3868_06060 PF02132 RecR protein D3868_06065 PF02575 YbaB/EbfC DNA-binding family D3868_06070 PF12170 DNA polymerase III tau subunit V interacting with alpha D3868_06070 PF12168 DNA polymerase III subunits tau domain IV DnaB-binding D3868_06070 PF12169 DNA polymerase III subunits gamma and tau domain III D3868_06080 PF00034 Cytochrome c D3868_06085 PF02348 Cytidylyltransferase D3868_06090 PF01842 ACT domain D3868_06090 PF00800 Prephenate dehydratase D3868_06095 PF00293 NUDIX domain D3868_06095 PF09296 NADH pyrophosphatase-like rudimentary NUDIX domain D3868_06095 PF09297 NADH pyrophosphatase zinc ribbon domain D3868_06100 PF00459 Inositol monophosphatase family D3868_06110 PF00230 Major intrinsic protein D3868_06115 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle D3868_06125 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle D3868_06130 PF00528 Binding-protein-dependent transport system inner membrane component D3868_06140 PF12911 N-terminal TM domain of oligopeptide transport permease C D3868_06140 PF00528 Binding-protein-dependent transport system inner membrane component D3868_06145 PF08352 Oligopeptide/dipeptide transporter, C-terminal region D3868_06145 PF00005 ABC transporter D3868_06155 PF00849 RNA pseudouridylate synthase D3868_06160 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain D3868_06180 PF14841 FliG middle domain D3868_06180 PF14842 FliG N-terminal domain D3868_06180 PF01706 FliG C-terminal domain D3868_06185 PF02789 Cytosol aminopeptidase family, N-terminal domain D3868_06185 PF00883 Cytosol aminopeptidase family, catalytic domain D3868_06195 PF16868 NMT1-like family D3868_06250 PF04055 Radical SAM superfamily D3868_06255 PF02798 Glutathione S-transferase, N-terminal domain D3868_06255 PF00043 Glutathione S-transferase, C-terminal domain D3868_06265 PF12911 N-terminal TM domain of oligopeptide transport permease C D3868_06265 PF00528 Binding-protein-dependent transport system inner membrane component D3868_06270 PF00528 Binding-protein-dependent transport system inner membrane component D3868_06275 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle D3868_06280 PF00378 Enoyl-CoA hydratase/isomerase D3868_06285 PF07690 Major Facilitator Superfamily D3868_06295 PF03466 LysR substrate binding domain D3868_06295 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family D3868_06310 PF00563 EAL domain D3868_06310 PF00990 Diguanylate cyclase, GGDEF domain D3868_06310 PF08447 PAS fold D3868_06310 PF08448 PAS fold D3868_06315 PF02798 Glutathione S-transferase, N-terminal domain D3868_06320 PF00202 Aminotransferase class-III D3868_06330 PF00155 Aminotransferase class I and II D3868_06360 PF02646 RmuC family D3868_06365 PF00313 'Cold-shock' DNA-binding domain D3868_06375 PF01327 Polypeptide deformylase D3868_06380 PF02911 Formyl transferase, C-terminal domain D3868_06380 PF00551 Formyl transferase D3868_06385 PF01416 tRNA pseudouridine synthase D3868_06390 PF02653 Branched-chain amino acid transport system / permease component D3868_06395 PF01878 EVE domain D3868_06405 PF08279 HTH domain D3868_06405 PF13280 WYL domain D3868_06410 PF00330 Aconitase family (aconitate hydratase) D3868_06425 PF01245 Ribosomal protein L19 D3868_06430 PF01746 tRNA (Guanine-1)-methyltransferase D3868_06435 PF05239 PRC-barrel domain D3868_06435 PF01782 RimM N-terminal domain D3868_06440 PF00886 Ribosomal protein S16 D3868_06445 PF02881 SRP54-type protein, helical bundle domain D3868_06445 PF00448 SRP54-type protein, GTPase domain D3868_06445 PF02978 Signal peptide binding domain D3868_06470 PF03707 Bacterial signalling protein N terminal repeat D3868_06470 PF00563 EAL domain D3868_06470 PF00990 Diguanylate cyclase, GGDEF domain D3868_06480 PF14602 Hexapeptide repeat of succinyl-transferase D3868_06480 PF14805 Tetrahydrodipicolinate N-succinyltransferase N-terminal D3868_06480 PF00132 Bacterial transferase hexapeptide (six repeats) D3868_06495 PF02277 Phosphoribosyltransferase D3868_06500 PF02654 Cobalamin-5-phosphate synthase D3868_06515 PF04613 UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase, LpxD D3868_06515 PF00132 Bacterial transferase hexapeptide (six repeats) D3868_06525 PF00005 ABC transporter D3868_06530 PF00512 His Kinase A (phospho-acceptor) domain D3868_06530 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase D3868_06535 PF02954 Bacterial regulatory protein, Fis family D3868_06535 PF00072 Response regulator receiver domain D3868_06550 PF13614 AAA domain D3868_06550 PF02706 Chain length determinant protein D3868_06550 PF13807 G-rich domain on putative tyrosine kinase D3868_06560 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain D3868_06560 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain D3868_06560 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain D3868_06565 PF01370 NAD dependent epimerase/dehydratase family D3868_06570 PF01370 NAD dependent epimerase/dehydratase family D3868_06585 PF13439 Glycosyltransferase Family 4 D3868_06585 PF00534 Glycosyl transferases group 1 D3868_06615 PF00535 Glycosyl transferase family 2 D3868_06625 PF00468 Ribosomal protein L34 D3868_06630 PF00825 Ribonuclease P D3868_06635 PF01809 Putative membrane protein insertion efficiency factor D3868_06640 PF14849 YidC periplasmic domain D3868_06640 PF02096 60Kd inner membrane protein D3868_06645 PF01926 50S ribosome-binding GTPase D3868_06660 PF00696 Amino acid kinase family D3868_06670 PF01544 CorA-like Mg2+ transporter protein D3868_06685 PF03255 Acetyl co-enzyme A carboxylase carboxyltransferase alpha subunit D3868_06695 PF01274 Malate synthase D3868_06700 PF00589 Phage integrase family D3868_06700 PF02899 Phage integrase, N-terminal SAM-like domain D3868_06715 PF01202 Shikimate kinase D3868_06720 PF01761 3-dehydroquinate synthase D3868_06725 PF00571 CBS domain D3868_06740 PF01722 BolA-like protein D3868_06745 PF00226 DnaJ domain D3868_06750 PF08406 CbbQ/NirQ/NorQ C-terminal D3868_06750 PF12556 Cobaltochelatase CobS subunit N terminal D3868_06750 PF07728 AAA domain (dynein-related subfamily) D3868_06760 PF11775 Cobalamin biosynthesis protein CobT VWA domain D3868_06760 PF06213 Cobalamin biosynthesis protein CobT D3868_06775 PF05726 Pirin C-terminal cupin domain D3868_06775 PF02678 Pirin D3868_06790 PF00072 Response regulator receiver domain D3868_06790 PF00990 Diguanylate cyclase, GGDEF domain D3868_06795 PF00697 N-(5'phosphoribosyl)anthranilate (PRA) isomerase D3868_06800 PF00215 Orotidine 5'-phosphate decarboxylase / HUMPS family D3868_06810 PF01266 FAD dependent oxidoreductase D3868_06815 PF02423 Ornithine cyclodeaminase/mu-crystallin family D3868_06825 PF00216 Bacterial DNA-binding protein D3868_06835 PF00575 S1 RNA binding domain D3868_06840 PF02224 Cytidylate kinase D3868_06845 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) D3868_06865 PF02678 Pirin D3868_06865 PF05726 Pirin C-terminal cupin domain D3868_06870 PF00994 Probable molybdopterin binding domain D3868_06870 PF03453 MoeA N-terminal region (domain I and II) D3868_06870 PF03454 MoeA C-terminal region (domain IV) D3868_06880 PF00990 Diguanylate cyclase, GGDEF domain D3868_06880 PF00072 Response regulator receiver domain D3868_06885 PF00072 Response regulator receiver domain D3868_06885 PF00512 His Kinase A (phospho-acceptor) domain D3868_06885 PF00672 HAMP domain D3868_06885 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase D3868_06885 PF01627 Hpt domain D3868_06885 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) D3868_06890 PF00672 HAMP domain D3868_06890 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase D3868_06890 PF00512 His Kinase A (phospho-acceptor) domain D3868_06890 PF17149 Periplasmic sensor domain found in signal transduction proteins D3868_06890 PF00072 Response regulator receiver domain D3868_06890 PF01627 Hpt domain D3868_06900 PF00535 Glycosyl transferase family 2 D3868_06910 PF00011 Hsp20/alpha crystallin family D3868_06940 PF01757 Acyltransferase family D3868_06945 PF01757 Acyltransferase family D3868_06950 PF00330 Aconitase family (aconitate hydratase) D3868_06950 PF00694 Aconitase C-terminal domain D3868_06975 PF01008 Initiation factor 2 subunit family D3868_06980 PF12282 Signal transduction histidine kinase D3868_06980 PF07568 Histidine kinase D3868_06980 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase D3868_06995 PF00474 Sodium:solute symporter family D3868_07000 PF04341 Protein of unknown function, DUF485 D3868_07020 PF02659 Putative manganese efflux pump D3868_07025 PF00795 Carbon-nitrogen hydrolase D3868_07030 PF00462 Glutaredoxin D3868_07035 PF14572 Phosphoribosyl synthetase-associated domain D3868_07035 PF13793 N-terminal domain of ribose phosphate pyrophosphokinase D3868_07040 PF01313 Bacterial export proteins, family 3 D3868_07065 PF03186 CobD/Cbib protein D3868_07070 PF00270 DEAD/DEAH box helicase D3868_07070 PF00271 Helicase conserved C-terminal domain D3868_07075 PF01741 Large-conductance mechanosensitive channel, MscL D3868_07080 PF07516 SecA Wing and Scaffold domain D3868_07080 PF01043 SecA preprotein cross-linking domain D3868_07080 PF02810 SEC-C motif D3868_07080 PF07517 SecA DEAD-like domain D3868_07090 PF01960 ArgJ family D3868_07100 PF00293 NUDIX domain D3868_07105 PF00271 Helicase conserved C-terminal domain D3868_07105 PF00270 DEAD/DEAH box helicase D3868_07105 PF00570 HRDC domain D3868_07105 PF09382 RQC domain D3868_07105 PF16124 RecQ zinc-binding D3868_07130 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component D3868_07135 PF04290 Tripartite ATP-independent periplasmic transporters, DctQ component D3868_07140 PF03480 Bacterial extracellular solute-binding protein, family 7 D3868_07145 PF00691 OmpA family D3868_07170 PF00296 Luciferase-like monooxygenase D3868_07175 PF01641 SelR domain D3868_07180 PF01738 Dienelactone hydrolase family D3868_07185 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II D3868_07185 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I D3868_07185 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain D3868_07185 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III D3868_07190 PF00313 'Cold-shock' DNA-binding domain D3868_07225 PF00005 ABC transporter D3868_07225 PF08352 Oligopeptide/dipeptide transporter, C-terminal region D3868_07230 PF00005 ABC transporter D3868_07230 PF08352 Oligopeptide/dipeptide transporter, C-terminal region D3868_07240 PF00528 Binding-protein-dependent transport system inner membrane component D3868_07250 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle D3868_07270 PF04655 Aminoglycoside/hydroxyurea antibiotic resistance kinase D3868_07280 PF00563 EAL domain D3868_07280 PF00990 Diguanylate cyclase, GGDEF domain D3868_07280 PF03707 Bacterial signalling protein N terminal repeat D3868_07310 PF01569 PAP2 superfamily D3868_07320 PF11849 Domain of unknown function (DUF3369) D3868_07335 PF04024 PspC domain D3868_07340 PF06667 Phage shock protein B D3868_07345 PF04012 PspA/IM30 family D3868_07350 PF02954 Bacterial regulatory protein, Fis family D3868_07350 PF00158 Sigma-54 interaction domain D3868_07360 PF00905 Penicillin binding protein transpeptidase domain D3868_07360 PF00912 Transglycosylase D3868_07365 PF01593 Flavin containing amine oxidoreductase D3868_07375 PF03264 NapC/NirT cytochrome c family, N-terminal region D3868_07380 PF03150 Di-haem cytochrome c peroxidase D3868_07380 PF00034 Cytochrome c D3868_07385 PF06628 Catalase-related immune-responsive D3868_07385 PF00199 Catalase D3868_07390 PF00118 TCP-1/cpn60 chaperonin family D3868_07395 PF00166 Chaperonin 10 Kd subunit D3868_07400 PF06233 Usg-like family D3868_07405 PF00959 Phage lysozyme D3868_07410 PF07992 Pyridine nucleotide-disulphide oxidoreductase D3868_07415 PF02628 Cytochrome oxidase assembly protein D3868_07440 PF00005 ABC transporter D3868_07440 PF08352 Oligopeptide/dipeptide transporter, C-terminal region D3868_07445 PF00924 Mechanosensitive ion channel D3868_07450 PF11849 Domain of unknown function (DUF3369) D3868_07455 PF00156 Phosphoribosyl transferase domain D3868_07465 PF00175 Oxidoreductase NAD-binding domain D3868_07465 PF00970 Oxidoreductase FAD-binding domain D3868_07470 PF01381 Helix-turn-helix D3868_07470 PF09856 Predicted transcriptional regulator (DUF2083) D3868_07470 PF06114 IrrE N-terminal-like domain D3868_07475 PF00463 Isocitrate lyase family D3868_07480 PF01965 DJ-1/PfpI family D3868_07485 PF00512 His Kinase A (phospho-acceptor) domain D3868_07485 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase D3868_07485 PF00989 PAS fold D3868_07490 PF00174 Oxidoreductase molybdopterin binding domain D3868_07495 PF01558 Pyruvate ferredoxin/flavodoxin oxidoreductase D3868_07495 PF17147 Pyruvate:ferredoxin oxidoreductase core domain II D3868_07495 PF01855 Pyruvate flavodoxin/ferredoxin oxidoreductase, thiamine diP-bdg D3868_07500 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain D3868_07520 PF05974 Domain of unknown function (DUF892) D3868_07535 PF00156 Phosphoribosyl transferase domain D3868_07545 PF00528 Binding-protein-dependent transport system inner membrane component D3868_07550 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle D3868_07555 PF02633 Creatinine amidohydrolase D3868_07605 PF00589 Phage integrase family D3868_07625 PF05717 IS66 Orf2 like protein D3868_07630 PF00872 Transposase, Mutator family D3868_07655 PF00333 Ribosomal protein S5, N-terminal domain D3868_07655 PF03719 Ribosomal protein S5, C-terminal domain D3868_07670 PF00665 Integrase core domain D3868_07670 PF02796 Helix-turn-helix domain of resolvase D3868_07680 PF07508 Recombinase D3868_07680 PF13408 Recombinase zinc beta ribbon domain D3868_07680 PF00239 Resolvase, N terminal domain D3868_07685 PF00665 Integrase core domain D3868_07690 PF01695 IstB-like ATP binding protein D3868_07790 PF06594 Haemolysin-type calcium binding protein related domain D3868_07790 PF00353 RTX calcium-binding nonapeptide repeat (4 copies) D3868_07815 PF00004 ATPase family associated with various cellular activities (AAA) D3868_07820 PF12391 Protocatechuate 3,4-dioxygenase beta subunit N terminal D3868_07820 PF00775 Dioxygenase D3868_07925 PF17854 FtsK alpha domain D3868_07925 PF01580 FtsK/SpoIIIE family D3868_07925 PF13491 4TM region of DNA translocase FtsK/SpoIIIE D3868_07935 PF00543 Nitrogen regulatory protein P-II D3868_07940 PF01494 FAD binding domain D3868_07945 PF02834 LigT like Phosphoesterase D3868_07955 PF10442 FIST C domain D3868_07955 PF08495 FIST N domain D3868_07960 PF13472 GDSL-like Lipase/Acylhydrolase family D3868_07965 PF00005 ABC transporter D3868_07970 PF00005 ABC transporter D3868_07970 PF12704 MacB-like periplasmic core domain D3868_07970 PF02687 FtsX-like permease family D3868_07975 PF17151 Periplasmic sensor domain D3868_07975 PF00990 Diguanylate cyclase, GGDEF domain D3868_07980 PF01556 DnaJ C terminal domain D3868_07980 PF00226 DnaJ domain D3868_07980 PF00684 DnaJ central domain D3868_07985 PF00012 Hsp70 protein D3868_08005 PF13426 PAS domain D3868_08005 PF08447 PAS fold D3868_08005 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain D3868_08010 PF00072 Response regulator receiver domain D3868_08015 PF01025 GrpE D3868_08020 PF01628 HrcA protein C terminal domain D3868_08025 PF03725 3' exoribonuclease family, domain 2 D3868_08025 PF01138 3' exoribonuclease family, domain 1 D3868_08030 PF01725 Ham1 family D3868_08035 PF06969 HemN C-terminal domain D3868_08035 PF04055 Radical SAM superfamily D3868_08045 PF00186 Dihydrofolate reductase D3868_08065 PF02955 Prokaryotic glutathione synthetase, ATP-grasp domain D3868_08065 PF02951 Prokaryotic glutathione synthetase, N-terminal domain D3868_08070 PF13369 Transglutaminase-like superfamily D3868_08075 PF02021 Uncharacterised protein family UPF0102 D3868_08080 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases D3868_08095 PF01053 Cys/Met metabolism PLP-dependent enzyme D3868_08100 PF01740 STAS domain D3868_08110 PF01624 MutS domain I D3868_08110 PF05188 MutS domain II D3868_08110 PF05190 MutS family domain IV D3868_08110 PF00488 MutS domain V D3868_08110 PF05192 MutS domain III D3868_08125 PF01966 HD domain D3868_08125 PF08335 GlnD PII-uridylyltransferase D3868_08125 PF01909 Nucleotidyltransferase domain D3868_08145 PF13458 Periplasmic binding protein D3868_08150 PF00072 Response regulator receiver domain D3868_08150 PF09308 LuxQ, periplasmic D3868_08150 PF00512 His Kinase A (phospho-acceptor) domain D3868_08150 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase D3868_08155 PF03023 Lipid II flippase MurJ D3868_08160 PF00579 tRNA synthetases class I (W and Y) D3868_08165 PF01470 Pyroglutamyl peptidase D3868_08175 PF02810 SEC-C motif D3868_08190 PF00132 Bacterial transferase hexapeptide (six repeats) D3868_08195 PF00440 Bacterial regulatory proteins, tetR family D3868_08215 PF17284 Spermidine synthase tetramerisation domain D3868_08220 PF02675 S-adenosylmethionine decarboxylase D3868_08225 PF07722 Peptidase C26 D3868_08230 PF12802 MarR family D3868_08245 PF00300 Histidine phosphatase superfamily (branch 1) D3868_08250 PF00534 Glycosyl transferases group 1 D3868_08250 PF13439 Glycosyltransferase Family 4 D3868_08255 PF00990 Diguanylate cyclase, GGDEF domain D3868_08255 PF05230 MASE2 domain D3868_08260 PF13439 Glycosyltransferase Family 4 D3868_08260 PF00534 Glycosyl transferases group 1 D3868_08270 PF00664 ABC transporter transmembrane region D3868_08270 PF00005 ABC transporter D3868_08275 PF13302 Acetyltransferase (GNAT) domain D3868_08275 PF00027 Cyclic nucleotide-binding domain D3868_08300 PF08352 Oligopeptide/dipeptide transporter, C-terminal region D3868_08300 PF00005 ABC transporter D3868_08305 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle D3868_08310 PF00528 Binding-protein-dependent transport system inner membrane component D3868_08315 PF00528 Binding-protein-dependent transport system inner membrane component D3868_08315 PF12911 N-terminal TM domain of oligopeptide transport permease C D3868_08325 PF12706 Beta-lactamase superfamily domain D3868_08335 PF07995 Glucose / Sorbosone dehydrogenase D3868_08345 PF00486 Transcriptional regulatory protein, C terminal D3868_08345 PF00072 Response regulator receiver domain D3868_08350 PF00925 GTP cyclohydrolase II D3868_08365 PF01168 Alanine racemase, N-terminal domain D3868_08390 PF08264 Anticodon-binding domain of tRNA D3868_08390 PF00133 tRNA synthetases class I (I, L, M and V) D3868_08390 PF13603 Leucyl-tRNA synthetase, Domain 2 D3868_08410 PF17762 HTH domain found in ParB protein D3868_08410 PF02195 ParB-like nuclease domain D3868_08415 PF13614 AAA domain D3868_08420 PF02527 rRNA small subunit methyltransferase G D3868_08425 PF13932 GidA associated domain D3868_08425 PF01134 Glucose inhibited division protein A D3868_08430 PF01926 50S ribosome-binding GTPase D3868_08430 PF12631 MnmE helical domain D3868_08430 PF10396 GTP-binding protein TrmE N-terminus D3868_08450 PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain D3868_08450 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain D3868_08455 PF00107 Zinc-binding dehydrogenase D3868_08455 PF08240 Alcohol dehydrogenase GroES-like domain D3868_08460 PF00929 Exonuclease D3868_08465 PF01121 Dephospho-CoA kinase D3868_08470 PF18317 Shikimate 5'-dehydrogenase C-terminal domain D3868_08470 PF01488 Shikimate / quinate 5-dehydrogenase D3868_08470 PF08501 Shikimate dehydrogenase substrate binding domain D3868_08475 PF02545 Maf-like protein D3868_08480 PF03618 Kinase/pyrophosphorylase D3868_08485 PF01208 Uroporphyrinogen decarboxylase (URO-D) D3868_08505 PF00690 Cation transporter/ATPase, N-terminus D3868_08505 PF00689 Cation transporting ATPase, C-terminus D3868_08510 PF07498 Rho termination factor, N-terminal domain D3868_08510 PF07497 Rho termination factor, RNA-binding domain D3868_08510 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain D3868_08515 PF02556 Preprotein translocase subunit SecB D3868_08525 PF04280 Tim44-like domain D3868_08530 PF06725 3D domain D3868_08530 PF03562 MltA specific insert domain D3868_08540 PF01230 HIT domain D3868_08545 PF01503 Phosphoribosyl-ATP pyrophosphohydrolase D3868_08550 PF00977 Histidine biosynthesis protein D3868_08555 PF00977 Histidine biosynthesis protein D3868_08560 PF00583 Acetyltransferase (GNAT) family D3868_08565 PF00117 Glutamine amidotransferase class-I D3868_08570 PF00475 Imidazoleglycerol-phosphate dehydratase D3868_08580 PF00227 Proteasome subunit D3868_08585 PF10431 C-terminal, D2-small domain, of ClpB protein D3868_08585 PF07724 AAA domain (Cdc48 subfamily) D3868_08585 PF00004 ATPase family associated with various cellular activities (AAA) D3868_08595 PF13426 PAS domain D3868_08595 PF13188 PAS domain D3868_08595 PF00989 PAS fold D3868_08595 PF00512 His Kinase A (phospho-acceptor) domain D3868_08595 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase D3868_08610 PF02589 LUD domain D3868_08615 PF13183 4Fe-4S dicluster domain D3868_08615 PF02589 LUD domain D3868_08615 PF11870 Domain of unknown function (DUF3390) D3868_08620 PF02754 Cysteine-rich domain D3868_08625 PF00672 HAMP domain D3868_08625 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain D3868_08625 PF16591 Helical bimodular sensor domain D3868_08640 PF00950 ABC 3 transport family D3868_08645 PF00005 ABC transporter D3868_08650 PF01297 Zinc-uptake complex component A periplasmic D3868_08655 PF05173 Dihydrodipicolinate reductase, C-terminus D3868_08655 PF01113 Dihydrodipicolinate reductase, N-terminus D3868_08660 PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain D3868_08660 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain D3868_08670 PF00633 Helix-hairpin-helix motif D3868_08670 PF00730 HhH-GPD superfamily base excision DNA repair protein D3868_08670 PF10576 Iron-sulfur binding domain of endonuclease III D3868_08685 PF00294 pfkB family carbohydrate kinase D3868_08690 PF01925 Sulfite exporter TauE/SafE D3868_08715 PF00211 Adenylate and Guanylate cyclase catalytic domain D3868_08715 PF00672 HAMP domain D3868_08720 PF01106 NifU-like domain D3868_08730 PF01427 D-ala-D-ala dipeptidase D3868_08750 PF05443 ROS/MUCR transcriptional regulator protein D3868_08765 PF00919 Uncharacterized protein family UPF0004 D3868_08765 PF01938 TRAM domain D3868_08765 PF04055 Radical SAM superfamily D3868_08770 PF02562 PhoH-like protein D3868_08775 PF02130 Uncharacterized protein family UPF0054 D3868_08780 PF00571 CBS domain D3868_08780 PF03471 Transporter associated domain D3868_08785 PF00795 Carbon-nitrogen hydrolase D3868_08790 PF01381 Helix-turn-helix D3868_08795 PF02773 S-adenosylmethionine synthetase, C-terminal domain D3868_08795 PF00438 S-adenosylmethionine synthetase, N-terminal domain D3868_08795 PF02772 S-adenosylmethionine synthetase, central domain D3868_08810 PF17384 RimP C-terminal SH3 domain D3868_08810 PF02576 RimP N-terminal domain D3868_08815 PF13184 NusA-like KH domain D3868_08815 PF00575 S1 RNA binding domain D3868_08815 PF08529 NusA N-terminal domain D3868_08825 PF00009 Elongation factor Tu GTP binding domain D3868_08825 PF08364 Bacterial translation initiation factor IF-2 associated region D3868_08825 PF04760 Translation initiation factor IF-2, N-terminal region D3868_08825 PF03144 Elongation factor Tu domain 2 D3868_08825 PF11987 Translation-initiation factor 2 D3868_08830 PF02033 Ribosome-binding factor A D3868_08835 PF01509 TruB family pseudouridylate synthase (N terminal domain) D3868_08835 PF16198 tRNA pseudouridylate synthase B C-terminal domain D3868_08840 PF00312 Ribosomal protein S15 D3868_08845 PF01138 3' exoribonuclease family, domain 1 D3868_08845 PF03726 Polyribonucleotide nucleotidyltransferase, RNA binding domain D3868_08845 PF03725 3' exoribonuclease family, domain 2 D3868_08845 PF00575 S1 RNA binding domain D3868_08845 PF00013 KH domain D3868_08855 PF04228 Putative neutral zinc metallopeptidase D3868_08865 PF04055 Radical SAM superfamily D3868_08865 PF12544 Lysine-2,3-aminomutase D3868_08870 PF03009 Glycerophosphoryl diester phosphodiesterase family D3868_08885 PF02915 Rubrerythrin D3868_08900 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain D3868_08900 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain D3868_08910 PF00583 Acetyltransferase (GNAT) family D3868_08910 PF13607 Succinyl-CoA ligase like flavodoxin domain D3868_08910 PF13380 CoA binding domain D3868_08915 PF00056 lactate/malate dehydrogenase, NAD binding domain D3868_08915 PF02866 lactate/malate dehydrogenase, alpha/beta C-terminal domain D3868_08920 PF00719 Inorganic pyrophosphatase D3868_08925 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle D3868_08935 PF03109 ABC1 family D3868_08940 PF01209 ubiE/COQ5 methyltransferase family D3868_08955 PF01149 Formamidopyrimidine-DNA glycosylase N-terminal domain D3868_08955 PF06831 Formamidopyrimidine-DNA glycosylase H2TH domain D3868_08965 PF00378 Enoyl-CoA hydratase/isomerase D3868_08970 PF01649 Ribosomal protein S20 D3868_08975 PF00308 Bacterial dnaA protein D3868_08975 PF11638 DnaA N-terminal domain D3868_08975 PF08299 Bacterial dnaA protein helix-turn-helix D3868_08980 PF13416 Bacterial extracellular solute-binding protein D3868_08985 PF08402 TOBE domain D3868_08985 PF00005 ABC transporter D3868_08990 PF05425 Copper resistance protein D D3868_09005 PF00528 Binding-protein-dependent transport system inner membrane component D3868_09010 PF00528 Binding-protein-dependent transport system inner membrane component D3868_09025 PF00394 Multicopper oxidase D3868_09025 PF10518 TAT (twin-arginine translocation) pathway signal sequence D3868_09025 PF07732 Multicopper oxidase D3868_09025 PF07731 Multicopper oxidase D3868_09030 PF05958 tRNA (Uracil-5-)-methyltransferase D3868_09035 PF10672 S-adenosylmethionine-dependent methyltransferase D3868_09035 PF17785 PUA-like domain D3868_09045 PF00115 Cytochrome C and Quinol oxidase polypeptide I D3868_09060 PF14715 N-terminal domain of cytochrome oxidase-cbb3, FixP D3868_09060 PF00034 Cytochrome c D3868_09060 PF13442 Cytochrome C oxidase, cbb3-type, subunit III D3868_09065 PF12801 4Fe-4S binding domain D3868_09065 PF13746 4Fe-4S dicluster domain D3868_09065 PF11614 IG-like fold at C-terminal of FixG, putative oxidoreductase D3868_09075 PF00403 Heavy-metal-associated domain D3868_09080 PF03597 Cytochrome oxidase maturation protein cbb3-type D3868_09085 PF00027 Cyclic nucleotide-binding domain D3868_09085 PF13545 Crp-like helix-turn-helix domain D3868_09090 PF00390 Malic enzyme, N-terminal domain D3868_09090 PF01515 Phosphate acetyl/butaryl transferase D3868_09090 PF03949 Malic enzyme, NAD binding domain D3868_09100 PF12849 PBP superfamily domain D3868_09105 PF00528 Binding-protein-dependent transport system inner membrane component D3868_09110 PF00528 Binding-protein-dependent transport system inner membrane component D3868_09115 PF00005 ABC transporter D3868_09120 PF01895 PhoU domain D3868_09125 PF00486 Transcriptional regulatory protein, C terminal D3868_09125 PF00072 Response regulator receiver domain D3868_09140 PF00899 ThiF family D3868_09150 PF00291 Pyridoxal-phosphate dependent enzyme D3868_09155 PF02082 Transcriptional regulator D3868_09160 PF00692 dUTPase D3868_09165 PF04127 DNA / pantothenate metabolism flavoprotein D3868_09165 PF02441 Flavoprotein D3868_09170 PF00158 Sigma-54 interaction domain D3868_09170 PF00072 Response regulator receiver domain D3868_09170 PF02954 Bacterial regulatory protein, Fis family D3868_09175 PF00313 'Cold-shock' DNA-binding domain D3868_09180 PF00672 HAMP domain D3868_09180 PF00072 Response regulator receiver domain D3868_09180 PF00512 His Kinase A (phospho-acceptor) domain D3868_09180 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase D3868_09180 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) D3868_09180 PF01627 Hpt domain D3868_09185 PF00950 ABC 3 transport family D3868_09190 PF00950 ABC 3 transport family D3868_09195 PF00005 ABC transporter D3868_09200 PF01297 Zinc-uptake complex component A periplasmic D3868_09225 PF01475 Ferric uptake regulator family D3868_09235 PF00989 PAS fold D3868_09235 PF00512 His Kinase A (phospho-acceptor) domain D3868_09235 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase D3868_09240 PF00183 Hsp90 protein D3868_09255 PF01479 S4 domain D3868_09260 PF03471 Transporter associated domain D3868_09260 PF03741 Integral membrane protein TerC family D3868_09275 PF06779 Uncharacterised MFS-type transporter YbfB D3868_09280 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family D3868_09280 PF03466 LysR substrate binding domain D3868_09285 PF00037 4Fe-4S binding domain D3868_09285 PF11953 Domain of unknown function (DUF3470) D3868_09295 PF00561 alpha/beta hydrolase fold D3868_09310 PF02743 Cache domain D3868_09310 PF00211 Adenylate and Guanylate cyclase catalytic domain D3868_09310 PF00672 HAMP domain D3868_09315 PF04542 Sigma-70 region 2 D3868_09315 PF00140 Sigma-70 factor, region 1.2 D3868_09315 PF04545 Sigma-70, region 4 D3868_09325 PF01632 Ribosomal protein L35 D3868_09330 PF00453 Ribosomal protein L20 D3868_09335 PF02912 Aminoacyl tRNA synthetase class II, N-terminal domain D3868_09335 PF01409 tRNA synthetases class II core domain (F) D3868_09340 PF17759 Phenylalanyl tRNA synthetase beta chain CLM domain D3868_09340 PF03484 tRNA synthetase B5 domain D3868_09340 PF01588 Putative tRNA binding domain D3868_09340 PF03147 Ferredoxin-fold anticodon binding domain D3868_09340 PF03483 B3/4 domain D3868_09350 PF11849 Domain of unknown function (DUF3369) D3868_09360 PF03466 LysR substrate binding domain D3868_09360 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family D3868_09370 PF00679 Elongation factor G C-terminus D3868_09370 PF00009 Elongation factor Tu GTP binding domain D3868_09370 PF03144 Elongation factor Tu domain 2 D3868_09370 PF06421 GTP-binding protein LepA C-terminus D3868_09380 PF00534 Glycosyl transferases group 1 D3868_09380 PF08323 Starch synthase catalytic domain D3868_09385 PF00483 Nucleotidyl transferase D3868_09390 PF00909 Ammonium Transporter Family D3868_09400 PF06445 GyrI-like small molecule binding domain D3868_09420 PF04542 Sigma-70 region 2 D3868_09420 PF04545 Sigma-70, region 4 D3868_09430 PF04055 Radical SAM superfamily D3868_09445 PF00764 Arginosuccinate synthase D3868_09450 PF12729 Four helix bundle sensory module for signal transduction D3868_09450 PF00672 HAMP domain D3868_09450 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain D3868_09460 PF00581 Rhodanese-like domain D3868_09465 PF06803 Protein of unknown function (DUF1232) D3868_09470 PF00892 EamA-like transporter family D3868_09480 PF03918 Cytochrome C biogenesis protein D3868_09485 PF08534 Redoxin D3868_09490 PF16327 Cytochrome c-type biogenesis protein CcmF C-terminal D3868_09490 PF01578 Cytochrome C assembly protein D3868_09495 PF03100 CcmE D3868_09505 PF01578 Cytochrome C assembly protein D3868_09510 PF03466 LysR substrate binding domain D3868_09510 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family D3868_09520 PF01451 Low molecular weight phosphotyrosine protein phosphatase D3868_09525 PF02146 Sir2 family D3868_09530 PF03167 Uracil DNA glycosylase superfamily D3868_09545 PF02749 Quinolinate phosphoribosyl transferase, N-terminal domain D3868_09545 PF01729 Quinolinate phosphoribosyl transferase, C-terminal domain D3868_09550 PF01544 CorA-like Mg2+ transporter protein D3868_09555 PF02882 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain D3868_09555 PF00763 Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain D3868_09560 PF02594 Uncharacterised ACR, YggU family COG1872 D3868_09565 PF02325 YGGT family D3868_09580 PF00528 Binding-protein-dependent transport system inner membrane component D3868_09585 PF00528 Binding-protein-dependent transport system inner membrane component D3868_09590 PF00497 Bacterial extracellular solute-binding proteins, family 3 D3868_09595 PF00005 ABC transporter D3868_09600 PF02080 TrkA-C domain D3868_09600 PF06826 Predicted Permease Membrane Region D3868_09605 PF02080 TrkA-C domain D3868_09605 PF06826 Predicted Permease Membrane Region D3868_09610 PF00005 ABC transporter D3868_09615 PF03379 CcmB protein D3868_09620 PF00085 Thioredoxin D3868_09640 PF12804 MobA-like NTP transferase domain D3868_09650 PF02367 Threonylcarbamoyl adenosine biosynthesis protein TsaE D3868_09660 PF07992 Pyridine nucleotide-disulphide oxidoreductase D3868_09670 PF00486 Transcriptional regulatory protein, C terminal D3868_09670 PF00072 Response regulator receiver domain D3868_09675 PF00672 HAMP domain D3868_09675 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase D3868_09675 PF00512 His Kinase A (phospho-acceptor) domain D3868_09680 PF07992 Pyridine nucleotide-disulphide oxidoreductase D3868_09685 PF00512 His Kinase A (phospho-acceptor) domain D3868_09685 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase D3868_09690 PF00512 His Kinase A (phospho-acceptor) domain D3868_09690 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) D3868_09690 PF00072 Response regulator receiver domain D3868_09690 PF01627 Hpt domain D3868_09690 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase D3868_09690 PF00672 HAMP domain D3868_09695 PF00497 Bacterial extracellular solute-binding proteins, family 3 D3868_09700 PF00291 Pyridoxal-phosphate dependent enzyme D3868_09705 PF00290 Tryptophan synthase alpha chain D3868_09710 PF17848 Acetyl-coA carboxylase zinc finger domain D3868_09710 PF01039 Carboxyl transferase domain D3868_09715 PF02875 Mur ligase family, glutamate ligase domain D3868_09715 PF08245 Mur ligase middle domain D3868_09745 PF13426 PAS domain D3868_09745 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase D3868_09745 PF00512 His Kinase A (phospho-acceptor) domain D3868_09745 PF00989 PAS fold D3868_09745 PF13188 PAS domain D3868_09750 PF01227 GTP cyclohydrolase I D3868_09760 PF04073 Aminoacyl-tRNA editing domain D3868_09770 PF01227 GTP cyclohydrolase I D3868_09775 PF04379 ApaG domain D3868_09810 PF00270 DEAD/DEAH box helicase D3868_09810 PF00271 Helicase conserved C-terminal domain D3868_09875 PF00012 Hsp70 protein D3868_09880 PF13538 UvrD-like helicase C-terminal domain D3868_09895 PF03793 PASTA domain D3868_09895 PF00069 Protein kinase domain D3868_09960 PF00270 DEAD/DEAH box helicase D3868_09960 PF08148 DSHCT (NUC185) domain D3868_09960 PF00271 Helicase conserved C-terminal domain D3868_09965 PF00589 Phage integrase family D3868_09980 PF00005 ABC transporter D3868_09985 PF00528 Binding-protein-dependent transport system inner membrane component D3868_10000 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) D3868_10000 PF00512 His Kinase A (phospho-acceptor) domain D3868_10000 PF00672 HAMP domain D3868_10000 PF01627 Hpt domain D3868_10000 PF00072 Response regulator receiver domain D3868_10000 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase D3868_10010 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase D3868_10010 PF00512 His Kinase A (phospho-acceptor) domain D3868_10010 PF08448 PAS fold D3868_10010 PF00072 Response regulator receiver domain D3868_10010 PF13188 PAS domain D3868_10020 PF07722 Peptidase C26 D3868_10025 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase D3868_10025 PF00512 His Kinase A (phospho-acceptor) domain D3868_10025 PF00497 Bacterial extracellular solute-binding proteins, family 3 D3868_10035 PF13396 Phospholipase_D-nuclease N-terminal D3868_10035 PF13091 PLD-like domain D3868_10040 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain D3868_10045 PF00691 OmpA family D3868_10045 PF13488 Glycine zipper D3868_10075 PF13180 PDZ domain D3868_10075 PF00595 PDZ domain D3868_10105 PF01379 Porphobilinogen deaminase, dipyromethane cofactor binding domain D3868_10105 PF03900 Porphobilinogen deaminase, C-terminal domain D3868_10115 PF00814 Glycoprotease family D3868_10125 PF01210 NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus D3868_10125 PF07479 NAD-dependent glycerol-3-phosphate dehydrogenase C-terminus D3868_10130 PF03795 YCII-related domain D3868_10145 PF16177 Acetyl-coenzyme A synthetase N-terminus D3868_10145 PF13193 AMP-binding enzyme C-terminal domain D3868_10145 PF00501 AMP-binding enzyme D3868_10160 PF07896 Protein of unknown function (DUF1674) D3868_10165 PF01435 Peptidase family M48 D3868_10180 PF01029 NusB family D3868_10180 PF01189 16S rRNA methyltransferase RsmB/F D3868_10190 PF01808 AICARFT/IMPCHase bienzyme D3868_10190 PF02142 MGS-like domain D3868_10220 PF05088 Bacterial NAD-glutamate dehydrogenase D3868_10225 PF00672 HAMP domain D3868_10225 PF01966 HD domain D3868_10235 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain D3868_10235 PF00672 HAMP domain D3868_10245 PF03547 Membrane transport protein D3868_10250 PF03737 Aldolase/RraA D3868_10265 PF00085 Thioredoxin D3868_10270 PF05362 Lon protease (S16) C-terminal proteolytic domain D3868_10270 PF00004 ATPase family associated with various cellular activities (AAA) D3868_10270 PF02190 ATP-dependent protease La (LON) substrate-binding domain D3868_10275 PF03966 Trm112p-like protein D3868_10305 PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain D3868_10305 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain D3868_10310 PF02308 MgtC family D3868_10315 PF07690 Major Facilitator Superfamily D3868_10325 PF00512 His Kinase A (phospho-acceptor) domain D3868_10325 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase D3868_10325 PF09456 RcsC Alpha-Beta-Loop (ABL) D3868_10325 PF00072 Response regulator receiver domain D3868_10335 PF13416 Bacterial extracellular solute-binding protein D3868_10340 PF00528 Binding-protein-dependent transport system inner membrane component D3868_10345 PF00528 Binding-protein-dependent transport system inner membrane component D3868_10350 PF08402 TOBE domain D3868_10350 PF00005 ABC transporter D3868_10355 PF02798 Glutathione S-transferase, N-terminal domain D3868_10355 PF00043 Glutathione S-transferase, C-terminal domain D3868_10375 PF00270 DEAD/DEAH box helicase D3868_10375 PF00271 Helicase conserved C-terminal domain D3868_10380 PF01475 Ferric uptake regulator family D3868_10395 PF00512 His Kinase A (phospho-acceptor) domain D3868_10395 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) D3868_10395 PF00072 Response regulator receiver domain D3868_10395 PF00672 HAMP domain D3868_10395 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase D3868_10395 PF01627 Hpt domain D3868_10400 PF00512 His Kinase A (phospho-acceptor) domain D3868_10400 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase D3868_10405 PF01740 STAS domain D3868_10415 PF00486 Transcriptional regulatory protein, C terminal D3868_10415 PF00072 Response regulator receiver domain D3868_10435 PF00072 Response regulator receiver domain D3868_10435 PF00990 Diguanylate cyclase, GGDEF domain D3868_10440 PF00072 Response regulator receiver domain D3868_10440 PF00990 Diguanylate cyclase, GGDEF domain D3868_10450 PF01740 STAS domain D3868_10455 PF00672 HAMP domain D3868_10455 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain D3868_10460 PF01339 CheB methylesterase D3868_10460 PF00072 Response regulator receiver domain D3868_10465 PF03975 CheD chemotactic sensory transduction D3868_10470 PF03705 CheR methyltransferase, all-alpha domain D3868_10470 PF01739 CheR methyltransferase, SAM binding domain D3868_10475 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain D3868_10475 PF00672 HAMP domain D3868_10475 PF02203 Tar ligand binding domain homologue D3868_10480 PF01584 CheW-like domain D3868_10485 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase D3868_10485 PF02895 Signal transducing histidine kinase, homodimeric domain D3868_10485 PF01584 CheW-like domain D3868_10485 PF01627 Hpt domain D3868_10490 PF00072 Response regulator receiver domain D3868_10500 PF00672 HAMP domain D3868_10500 PF18698 Histidine kinase sensor domain D3868_10500 PF00989 PAS fold D3868_10500 PF00512 His Kinase A (phospho-acceptor) domain D3868_10500 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase D3868_10510 PF00929 Exonuclease D3868_10515 PF00486 Transcriptional regulatory protein, C terminal D3868_10515 PF00072 Response regulator receiver domain D3868_10530 PF04279 Intracellular septation protein A D3868_10540 PF10423 Bacterial AMP nucleoside phosphorylase N-terminus D3868_10540 PF01048 Phosphorylase superfamily D3868_10545 PF00448 SRP54-type protein, GTPase domain D3868_10545 PF02881 SRP54-type protein, helical bundle domain D3868_10550 PF00919 Uncharacterized protein family UPF0004 D3868_10550 PF04055 Radical SAM superfamily D3868_10555 PF01678 Diaminopimelate epimerase D3868_10580 PF00694 Aconitase C-terminal domain D3868_10585 PF00180 Isocitrate/isopropylmalate dehydrogenase D3868_10605 PF08543 Phosphomethylpyrimidine kinase D3868_10610 PF03641 Possible lysine decarboxylase D3868_10620 PF03969 AFG1-like ATPase D3868_10625 PF00990 Diguanylate cyclase, GGDEF domain D3868_10630 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase D3868_10630 PF00512 His Kinase A (phospho-acceptor) domain D3868_10635 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) D3868_10635 PF02817 e3 binding domain D3868_10635 PF00364 Biotin-requiring enzyme D3868_10640 PF02779 Transketolase, pyrimidine binding domain D3868_10640 PF00676 Dehydrogenase E1 component D3868_10640 PF16078 2-oxoglutarate dehydrogenase N-terminus D3868_10640 PF16870 2-oxoglutarate dehydrogenase C-terminal D3868_10645 PF02629 CoA binding domain D3868_10645 PF00549 CoA-ligase D3868_10650 PF00549 CoA-ligase D3868_10650 PF08442 ATP-grasp domain D3868_10655 PF02866 lactate/malate dehydrogenase, alpha/beta C-terminal domain D3868_10655 PF00056 lactate/malate dehydrogenase, NAD binding domain D3868_10670 PF01921 tRNA synthetases class I (K) D3868_10675 PF00893 Small Multidrug Resistance protein D3868_10685 PF00912 Transglycosylase D3868_10690 PF04851 Type III restriction enzyme, res subunit D3868_10690 PF00929 Exonuclease D3868_10690 PF13307 Helicase C-terminal domain D3868_10695 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain D3868_10695 PF00672 HAMP domain D3868_10705 PF04204 Homoserine O-succinyltransferase D3868_10715 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain D3868_10715 PF00672 HAMP domain D3868_10730 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase D3868_10730 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase D3868_10735 PF13673 Acetyltransferase (GNAT) domain D3868_10740 PF02774 Semialdehyde dehydrogenase, dimerisation domain D3868_10740 PF01118 Semialdehyde dehydrogenase, NAD binding domain D3868_10750 PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit D3868_10760 PF00890 FAD binding domain D3868_10760 PF02910 Fumarate reductase flavoprotein C-term D3868_10765 PF13085 2Fe-2S iron-sulfur cluster binding domain D3868_10765 PF13237 4Fe-4S dicluster domain D3868_10775 PF01063 Amino-transferase class IV D3868_10830 PF01223 DNA/RNA non-specific endonuclease D3868_10860 PF13520 Amino acid permease D3868_10880 PF00775 Dioxygenase D3868_10880 PF12391 Protocatechuate 3,4-dioxygenase beta subunit N terminal D3868_10890 PF03070 TENA/THI-4/PQQC family D3868_10895 PF13811 Domain of unknown function (DUF4186) D3868_10900 PF00239 Resolvase, N terminal domain D3868_10900 PF02796 Helix-turn-helix domain of resolvase D3868_10935 PF00872 Transposase, Mutator family D3868_10955 PF12705 PD-(D/E)XK nuclease superfamily D3868_10955 PF00580 UvrD/REP helicase N-terminal domain D3868_10955 PF13361 UvrD-like helicase C-terminal domain D3868_10975 PF07690 Major Facilitator Superfamily D3868_11035 PF00563 EAL domain D3868_11035 PF00990 Diguanylate cyclase, GGDEF domain D3868_11035 PF03707 Bacterial signalling protein N terminal repeat D3868_11070 PF00353 RTX calcium-binding nonapeptide repeat (4 copies) D3868_11070 PF13229 Right handed beta helix region D3868_11070 PF12708 Pectate lyase superfamily protein D3868_11100 PF01180 Dihydroorotate dehydrogenase D3868_11110 PF03129 Anticodon binding domain D3868_11110 PF02824 TGS domain D3868_11110 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) D3868_11110 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain D3868_11115 PF05198 Translation initiation factor IF-3, N-terminal domain D3868_11115 PF00707 Translation initiation factor IF-3, C-terminal domain D3868_11120 PF00912 Transglycosylase D3868_11120 PF00905 Penicillin binding protein transpeptidase domain D3868_11145 PF13477 Glycosyl transferase 4-like D3868_11145 PF00534 Glycosyl transferases group 1 D3868_11165 PF03929 PepSY-associated TM region D3868_11170 PF07715 TonB-dependent Receptor Plug Domain D3868_11170 PF00593 TonB dependent receptor D3868_11190 PF00884 Sulfatase D3868_11205 PF13519 von Willebrand factor type A domain D3868_11205 PF07584 Aerotolerance regulator N-terminal D3868_11225 PF17863 AAA lid domain D3868_11225 PF07726 ATPase family associated with various cellular activities (AAA) D3868_11235 PF03781 Sulfatase-modifying factor enzyme 1 D3868_11250 PF03466 LysR substrate binding domain D3868_11250 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family D3868_11255 PF02515 CoA-transferase family III D3868_11260 PF00378 Enoyl-CoA hydratase/isomerase D3868_11270 PF01425 Amidase D3868_11285 PF02653 Branched-chain amino acid transport system / permease component D3868_11290 PF02653 Branched-chain amino acid transport system / permease component D3868_11290 PF11862 Domain of unknown function (DUF3382) D3868_11295 PF00005 ABC transporter D3868_11295 PF12399 Branched-chain amino acid ATP-binding cassette transporter D3868_11300 PF00005 ABC transporter D3868_11315 PF03781 Sulfatase-modifying factor enzyme 1 D3868_11325 PF00005 ABC transporter D3868_11355 PF00092 von Willebrand factor type A domain D3868_11360 PF13180 PDZ domain D3868_11380 PF01322 Cytochrome C' D3868_11390 PF06965 Na+/H+ antiporter 1 D3868_11415 PF00210 Ferritin-like domain D3868_11425 PF07992 Pyridine nucleotide-disulphide oxidoreductase D3868_11440 PF06258 Mitochondrial fission ELM1 D3868_11445 PF01037 Lrp/AsnC ligand binding domain D3868_11455 PF01272 Transcription elongation factor, GreA/GreB, C-term D3868_11455 PF03449 Transcription elongation factor, N-terminal D3868_11460 PF02142 MGS-like domain D3868_11460 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain D3868_11460 PF02787 Carbamoyl-phosphate synthetase large chain, oligomerisation domain D3868_11475 PF02308 MgtC family D3868_11485 PF13491 4TM region of DNA translocase FtsK/SpoIIIE D3868_11485 PF17854 FtsK alpha domain D3868_11485 PF01580 FtsK/SpoIIIE family D3868_11485 PF09397 Ftsk gamma domain D3868_11505 PF01625 Peptide methionine sulfoxide reductase D3868_11515 PF08032 RNA 2'-O ribose methyltransferase substrate binding D3868_11515 PF00588 SpoU rRNA Methylase family D3868_11520 PF00106 short chain dehydrogenase D3868_11525 PF09335 SNARE associated Golgi protein D3868_11535 PF00034 Cytochrome c D3868_11540 PF03459 TOBE domain D3868_11540 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family D3868_11545 PF00171 Aldehyde dehydrogenase family D3868_11560 PF01627 Hpt domain D3868_11560 PF00512 His Kinase A (phospho-acceptor) domain D3868_11560 PF00497 Bacterial extracellular solute-binding proteins, family 3 D3868_11560 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase D3868_11560 PF00989 PAS fold D3868_11560 PF00072 Response regulator receiver domain D3868_11570 PF00005 ABC transporter D3868_11610 PF00072 Response regulator receiver domain D3868_11610 PF00196 Bacterial regulatory proteins, luxR family D3868_11620 PF00005 ABC transporter D3868_11640 PF00034 Cytochrome c D3868_11655 PF02600 Disulfide bond formation protein DsbB D3868_11660 PF03232 Ubiquinone biosynthesis protein COQ7 D3868_11675 PF00749 tRNA synthetases class I (E and Q), catalytic domain D3868_11680 PF00072 Response regulator receiver domain D3868_11680 PF09308 LuxQ, periplasmic D3868_11680 PF00512 His Kinase A (phospho-acceptor) domain D3868_11680 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase D3868_11690 PF00072 Response regulator receiver domain D3868_11690 PF08769 Sporulation initiation factor Spo0A C terminal D3868_11695 PF08298 PrkA AAA domain D3868_11695 PF06798 PrkA serine protein kinase C-terminal domain D3868_11700 PF04285 Protein of unknown function (DUF444) D3868_11705 PF04293 SpoVR like protein D3868_11710 PF00211 Adenylate and Guanylate cyclase catalytic domain D3868_11710 PF00672 HAMP domain D3868_11720 PF08482 ATP-dependent helicase C-terminal D3868_11720 PF04408 Helicase associated domain (HA2) D3868_11720 PF00270 DEAD/DEAH box helicase D3868_11720 PF00271 Helicase conserved C-terminal domain D3868_11725 PF00005 ABC transporter D3868_11745 PF00072 Response regulator receiver domain D3868_11745 PF00486 Transcriptional regulatory protein, C terminal D3868_11770 PF01145 SPFH domain / Band 7 family D3868_11770 PF16200 C-terminal region of band_7 D3868_11775 PF01594 AI-2E family transporter D3868_11785 PF05145 Transition state regulatory protein AbrB D3868_11790 PF04952 Succinylglutamate desuccinylase / Aspartoacylase family D3868_11800 PF01513 ATP-NAD kinase D3868_11805 PF04055 Radical SAM superfamily D3868_11805 PF06463 Molybdenum Cofactor Synthesis C D3868_11820 PF00072 Response regulator receiver domain D3868_11820 PF00672 HAMP domain D3868_11820 PF17149 Periplasmic sensor domain found in signal transduction proteins D3868_11820 PF00512 His Kinase A (phospho-acceptor) domain D3868_11820 PF01627 Hpt domain D3868_11820 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase D3868_11830 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase D3868_11830 PF00989 PAS fold D3868_11830 PF00512 His Kinase A (phospho-acceptor) domain D3868_11845 PF01515 Phosphate acetyl/butaryl transferase D3868_11850 PF00871 Acetokinase family D3868_11860 PF00571 CBS domain D3868_11890 PF00072 Response regulator receiver domain D3868_11890 PF00196 Bacterial regulatory proteins, luxR family D3868_11895 PF00072 Response regulator receiver domain D3868_11895 PF00196 Bacterial regulatory proteins, luxR family D3868_11925 PF01321 Creatinase/Prolidase N-terminal domain D3868_11925 PF00557 Metallopeptidase family M24 D3868_11925 PF01321 Creatinase/Prolidase N-terminal domain D3868_11925 PF00557 Metallopeptidase family M24 D3868_11930 PF00072 Response regulator receiver domain D3868_11945 PF13525 Outer membrane lipoprotein D3868_11950 PF02463 RecF/RecN/SMC N terminal domain D3868_11970 PF03119 NAD-dependent DNA ligase C4 zinc finger domain D3868_11970 PF03120 NAD-dependent DNA ligase OB-fold domain D3868_11970 PF12826 Helix-hairpin-helix motif D3868_11970 PF00533 BRCA1 C Terminus (BRCT) domain D3868_11970 PF01653 NAD-dependent DNA ligase adenylation domain D3868_11980 PF03331 UDP-3-O-acyl N-acetylglycosamine deacetylase D3868_11985 PF00091 Tubulin/FtsZ family, GTPase domain D3868_11985 PF12327 FtsZ family, C-terminal domain D3868_11990 PF02491 SHS2 domain inserted in FTSA D3868_11995 PF03799 Cell division protein FtsQ D3868_11995 PF08478 POTRA domain, FtsQ-type D3868_12000 PF07478 D-ala D-ala ligase C-terminus D3868_12000 PF01820 D-ala D-ala ligase N-terminus D3868_12005 PF01565 FAD binding domain D3868_12005 PF02873 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain D3868_12010 PF01225 Mur ligase family, catalytic domain D3868_12010 PF02875 Mur ligase family, glutamate ligase domain D3868_12010 PF08245 Mur ligase middle domain D3868_12020 PF04101 Glycosyltransferase family 28 C-terminal domain D3868_12020 PF03033 Glycosyltransferase family 28 N-terminal domain D3868_12025 PF01098 Cell cycle protein D3868_12030 PF08245 Mur ligase middle domain D3868_12035 PF00953 Glycosyl transferase family 4 D3868_12035 PF10555 Phospho-N-acetylmuramoyl-pentapeptide-transferase signature 1 D3868_12040 PF08245 Mur ligase middle domain D3868_12040 PF02875 Mur ligase family, glutamate ligase domain D3868_12040 PF01225 Mur ligase family, catalytic domain D3868_12045 PF02875 Mur ligase family, glutamate ligase domain D3868_12045 PF08245 Mur ligase middle domain D3868_12045 PF01225 Mur ligase family, catalytic domain D3868_12050 PF03717 Penicillin-binding Protein dimerisation domain D3868_12050 PF00905 Penicillin binding protein transpeptidase domain D3868_12060 PF01795 MraW methylase family D3868_12065 PF02381 MraZ protein, putative antitoxin-like D3868_12075 PF01510 N-acetylmuramoyl-L-alanine amidase D3868_12090 PF00226 DnaJ domain D3868_12090 PF05099 Tellurite resistance protein TerB D3868_12100 PF01968 Hydantoinase/oxoprolinase D3868_12100 PF05378 Hydantoinase/oxoprolinase N-terminal region D3868_12105 PF01565 FAD binding domain D3868_12105 PF02913 FAD linked oxidases, C-terminal domain D3868_12110 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase D3868_12110 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase D3868_12125 PF13426 PAS domain D3868_12125 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase D3868_12125 PF00072 Response regulator receiver domain D3868_12150 PF00348 Polyprenyl synthetase D3868_12160 PF05175 Methyltransferase small domain D3868_12165 PF01343 Peptidase family S49 D3868_12165 PF06965 Na+/H+ antiporter 1 D3868_12180 PF02091 Glycyl-tRNA synthetase alpha subunit D3868_12185 PF02092 Glycyl-tRNA synthetase beta subunit D3868_12185 PF05746 DALR anticodon binding domain D3868_12190 PF08502 LeuA allosteric (dimerisation) domain D3868_12190 PF00682 HMGL-like D3868_12195 PF04172 LrgB-like family D3868_12200 PF03788 LrgA family D3868_12205 PF12146 Serine aminopeptidase, S33 D3868_12220 PF08240 Alcohol dehydrogenase GroES-like domain D3868_12220 PF13823 Alcohol dehydrogenase GroES-associated D3868_12220 PF00107 Zinc-binding dehydrogenase D3868_12230 PF00128 Alpha amylase, catalytic domain D3868_12230 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) D3868_12230 PF11941 Domain of unknown function (DUF3459) D3868_12240 PF00512 His Kinase A (phospho-acceptor) domain D3868_12240 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase D3868_12270 PF01471 Putative peptidoglycan binding domain D3868_12270 PF01520 N-acetylmuramoyl-L-alanine amidase D3868_12275 PF05951 Bacterial protein of unknown function (DUF882) D3868_12290 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain D3868_12290 PF00672 HAMP domain D3868_12315 PF01220 Dehydroquinase class II D3868_12320 PF00364 Biotin-requiring enzyme D3868_12325 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain D3868_12325 PF02785 Biotin carboxylase C-terminal domain D3868_12325 PF00289 Biotin carboxylase, N-terminal domain D3868_12330 PF00445 Ribonuclease T2 family D3868_12335 PF03588 Leucyl/phenylalanyl-tRNA protein transferase D3868_12350 PF00004 ATPase family associated with various cellular activities (AAA) D3868_12350 PF07724 AAA domain (Cdc48 subfamily) D3868_12350 PF17871 AAA lid domain D3868_12350 PF02861 Clp amino terminal domain, pathogenicity island component D3868_12350 PF10431 C-terminal, D2-small domain, of ClpB protein D3868_12355 PF02617 ATP-dependent Clp protease adaptor protein ClpS D3868_12380 PF00768 D-alanyl-D-alanine carboxypeptidase D3868_12380 PF07943 Penicillin-binding protein 5, C-terminal domain D3868_12385 PF12849 PBP superfamily domain D3868_12390 PF00528 Binding-protein-dependent transport system inner membrane component D3868_12395 PF02634 FdhD/NarQ family D3868_12400 PF12804 MobA-like NTP transferase domain D3868_12425 PF01568 Molydopterin dinucleotide binding domain D3868_12425 PF00384 Molybdopterin oxidoreductase D3868_12425 PF04879 Molybdopterin oxidoreductase Fe4S4 domain D3868_12430 PF13247 4Fe-4S dicluster domain D3868_12455 PF00596 Class II Aldolase and Adducin N-terminal domain D3868_12460 PF00672 HAMP domain D3868_12460 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase D3868_12460 PF00512 His Kinase A (phospho-acceptor) domain D3868_12460 PF01627 Hpt domain D3868_12460 PF00072 Response regulator receiver domain D3868_12460 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) D3868_12465 PF02900 Catalytic LigB subunit of aromatic ring-opening dioxygenase D3868_12470 PF00430 ATP synthase B/B' CF(0) D3868_12475 PF00430 ATP synthase B/B' CF(0) D3868_12480 PF00137 ATP synthase subunit C D3868_12485 PF00119 ATP synthase A chain D3868_12495 PF02630 SCO1/SenC D3868_12505 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain D3868_12505 PF17200 Single Cache domain 2 D3868_12505 PF00672 HAMP domain D3868_12510 PF02562 PhoH-like protein D3868_12515 PF03775 Septum formation inhibitor MinC, C-terminal domain D3868_12515 PF05209 Septum formation inhibitor MinC, N-terminal domain D3868_12520 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain D3868_12525 PF03776 Septum formation topological specificity factor MinE D3868_12540 PF17200 Single Cache domain 2 D3868_12540 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain D3868_12540 PF00672 HAMP domain D3868_12545 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain D3868_12545 PF00672 HAMP domain D3868_12545 PF12729 Four helix bundle sensory module for signal transduction D3868_12550 PF13378 Enolase C-terminal domain-like D3868_12550 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain D3868_12560 PF00266 Aminotransferase class-V D3868_12570 PF01329 Pterin 4 alpha carbinolamine dehydratase D3868_12580 PF02685 Glucokinase D3868_12585 PF00982 Glycosyltransferase family 20 D3868_12600 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain D3868_12600 PF00672 HAMP domain D3868_12605 PF02743 Cache domain D3868_12605 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain D3868_12605 PF00672 HAMP domain D3868_12610 PF01274 Malate synthase D3868_12615 PF18335 ATP-dependent RecD-like DNA helicase SH3 domain D3868_12615 PF14490 Helix-hairpin-helix containing domain D3868_12615 PF13538 UvrD-like helicase C-terminal domain D3868_12620 PF00313 'Cold-shock' DNA-binding domain D3868_12635 PF12729 Four helix bundle sensory module for signal transduction D3868_12635 PF00672 HAMP domain D3868_12635 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain D3868_12650 PF07992 Pyridine nucleotide-disulphide oxidoreductase D3868_12655 PF01012 Electron transfer flavoprotein domain D3868_12655 PF00766 Electron transfer flavoprotein FAD-binding domain D3868_12660 PF01012 Electron transfer flavoprotein domain D3868_12665 PF03206 Nitrogen fixation protein NifW D3868_12670 PF00132 Bacterial transferase hexapeptide (six repeats) D3868_12675 PF00682 HMGL-like D3868_12680 PF00266 Aminotransferase class-V D3868_12685 PF01106 NifU-like domain D3868_12685 PF04324 BFD-like [2Fe-2S] binding domain D3868_12685 PF01592 NifU-like N terminal domain D3868_12690 PF01521 Iron-sulphur cluster biosynthesis D3868_12705 PF13237 4Fe-4S dicluster domain D3868_12710 PF05082 Rop-like D3868_12715 PF03270 Protein of unknown function, DUF269 D3868_12720 PF02579 Dinitrogenase iron-molybdenum cofactor D3868_12725 PF00148 Nitrogenase component 1 type Oxidoreductase D3868_12730 PF04324 BFD-like [2Fe-2S] binding domain D3868_12730 PF00148 Nitrogenase component 1 type Oxidoreductase D3868_12735 PF13426 PAS domain D3868_12735 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain D3868_12735 PF08447 PAS fold D3868_12740 PF07992 Pyridine nucleotide-disulphide oxidoreductase D3868_12750 PF00148 Nitrogenase component 1 type Oxidoreductase D3868_12750 PF11844 Domain of unknown function (DUF3364) D3868_12755 PF00148 Nitrogenase component 1 type Oxidoreductase D3868_12760 PF00142 4Fe-4S iron sulfur cluster binding proteins, NifH/frxC family D3868_12770 PF07357 Dinitrogenase reductase ADP-ribosyltransferase (DRAT) D3868_12775 PF03747 ADP-ribosylglycohydrolase D3868_12780 PF03960 ArsC family D3868_12785 PF13230 Glutamine amidotransferases class-II D3868_12790 PF02525 Flavodoxin-like fold D3868_12800 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family D3868_12810 PF06988 NifT/FixU protein D3868_12815 PF00266 Aminotransferase class-V D3868_12825 PF04319 NifZ domain D3868_12830 PF01816 Leucine rich repeat variant D3868_12830 PF05484 LRV protein FeS4 cluster D3868_12840 PF12838 4Fe-4S dicluster domain D3868_12845 PF04055 Radical SAM superfamily D3868_12845 PF02579 Dinitrogenase iron-molybdenum cofactor D3868_12850 PF00211 Adenylate and Guanylate cyclase catalytic domain D3868_12860 PF00158 Sigma-54 interaction domain D3868_12860 PF02954 Bacterial regulatory protein, Fis family D3868_12860 PF13185 GAF domain D3868_12865 PF08362 YcdC-like protein, C-terminal region D3868_12865 PF00440 Bacterial regulatory proteins, tetR family D3868_12875 PF00005 ABC transporter D3868_12890 PF03411 Penicillin-insensitive murein endopeptidase D3868_12900 PF00444 Ribosomal protein L36 D3868_12905 PF01565 FAD binding domain D3868_12905 PF02913 FAD linked oxidases, C-terminal domain D3868_12910 PF01565 FAD binding domain D3868_12915 PF02754 Cysteine-rich domain D3868_12915 PF13183 4Fe-4S dicluster domain D3868_12920 PF01066 CDP-alcohol phosphatidyltransferase D3868_12935 PF02770 Acyl-CoA dehydrogenase, middle domain D3868_12935 PF02771 Acyl-CoA dehydrogenase, N-terminal domain D3868_12935 PF00441 Acyl-CoA dehydrogenase, C-terminal domain D3868_12935 PF12806 Acetyl-CoA dehydrogenase C-terminal like D3868_12950 PF01565 FAD binding domain D3868_12950 PF02913 FAD linked oxidases, C-terminal domain D3868_12955 PF01300 Telomere recombination D3868_12955 PF03481 Putative GTP-binding controlling metal-binding D3868_12960 PF13614 AAA domain D3868_12970 PF00578 AhpC/TSA family D3868_12975 PF08335 GlnD PII-uridylyltransferase D3868_12975 PF03710 Glutamate-ammonia ligase adenylyltransferase D3868_12985 PF00579 tRNA synthetases class I (W and Y) D3868_12990 PF03702 Anhydro-N-acetylmuramic acid kinase D3868_12995 PF02129 X-Pro dipeptidyl-peptidase (S15 family) D3868_13000 PF00132 Bacterial transferase hexapeptide (six repeats) D3868_13005 PF02082 Transcriptional regulator D3868_13010 PF00266 Aminotransferase class-V D3868_13015 PF07743 HSCB C-terminal oligomerisation domain D3868_13020 PF00111 2Fe-2S iron-sulfur cluster binding domain D3868_13040 PF00529 HlyD membrane-fusion protein of T1SS D3868_13040 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion D3868_13045 PF00005 ABC transporter D3868_13045 PF00664 ABC transporter transmembrane region D3868_13065 PF00106 short chain dehydrogenase D3868_13070 PF03466 LysR substrate binding domain D3868_13070 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family D3868_13075 PF13847 Methyltransferase domain D3868_13085 PF00512 His Kinase A (phospho-acceptor) domain D3868_13085 PF09308 LuxQ, periplasmic D3868_13085 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase D3868_13085 PF00072 Response regulator receiver domain D3868_13095 PF00072 Response regulator receiver domain D3868_13110 PF04891 NifQ D3868_13120 PF01894 Uncharacterised protein family UPF0047 D3868_13130 PF13406 Transglycosylase SLT domain D3868_13150 PF00465 Iron-containing alcohol dehydrogenase D3868_13170 PF00534 Glycosyl transferases group 1 D3868_13170 PF13439 Glycosyltransferase Family 4 D3868_13180 PF00583 Acetyltransferase (GNAT) family D3868_13195 PF00206 Lyase D3868_13195 PF10415 Fumarase C C-terminus D3868_13210 PF08448 PAS fold D3868_13210 PF00990 Diguanylate cyclase, GGDEF domain D3868_13210 PF00563 EAL domain D3868_13215 PF17769 Phosphoribosylaminoimidazole carboxylase C-terminal domain D3868_13215 PF02222 ATP-grasp domain D3868_13220 PF00731 AIR carboxylase D3868_13230 PF00365 Phosphofructokinase D3868_13240 PF13302 Acetyltransferase (GNAT) domain D3868_13255 PF06429 Flagellar basal body rod FlgEFG protein C-terminal D3868_13255 PF07559 Flagellar basal body protein FlaE D3868_13255 PF00460 Flagella basal body rod protein D3868_13260 PF00484 Carbonic anhydrase D3868_13265 PF02441 Flavoprotein D3868_13275 PF16197 Ketoacyl-synthetase C-terminal extension D3868_13275 PF08240 Alcohol dehydrogenase GroES-like domain D3868_13275 PF02801 Beta-ketoacyl synthase, C-terminal domain D3868_13275 PF00109 Beta-ketoacyl synthase, N-terminal domain D3868_13275 PF14765 Polyketide synthase dehydratase D3868_13275 PF08659 KR domain D3868_13275 PF00698 Acyl transferase domain D3868_13275 PF00550 Phosphopantetheine attachment site D3868_13310 PF14748 Pyrroline-5-carboxylate reductase dimerisation D3868_13310 PF03807 NADP oxidoreductase coenzyme F420-dependent D3868_13320 PF00501 AMP-binding enzyme D3868_13320 PF13193 AMP-binding enzyme C-terminal domain D3868_13325 PF13530 Sterol carrier protein domain D3868_13325 PF17668 Acetyltransferase (GNAT) domain D3868_13350 PF08331 Domain of unknown function (DUF1730) D3868_13355 PF14489 QueF-like protein D3868_13360 PF01702 Queuine tRNA-ribosyltransferase D3868_13365 PF02547 Queuosine biosynthesis protein D3868_13370 PF03109 ABC1 family D3868_13375 PF00672 HAMP domain D3868_13375 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain D3868_13380 PF01565 FAD binding domain D3868_13380 PF08031 Berberine and berberine like D3868_13405 PF00501 AMP-binding enzyme D3868_13405 PF16177 Acetyl-coenzyme A synthetase N-terminus D3868_13405 PF13193 AMP-binding enzyme C-terminal domain D3868_13415 PF08281 Sigma-70, region 4 D3868_13415 PF04542 Sigma-70 region 2 D3868_13450 PF00072 Response regulator receiver domain D3868_13450 PF01339 CheB methylesterase D3868_13470 PF00425 chorismate binding enzyme D3868_13470 PF00117 Glutamine amidotransferase class-I D3868_13470 PF04715 Anthranilate synthase component I, N terminal region D3868_13475 PF10073 Uncharacterized protein conserved in bacteria (DUF2312) D3868_13480 PF01262 Alanine dehydrogenase/PNT, C-terminal domain D3868_13480 PF05222 Alanine dehydrogenase/PNT, N-terminal domain D3868_13485 PF12769 4TM region of pyridine nucleotide transhydrogenase, mitoch D3868_13490 PF02233 NAD(P) transhydrogenase beta subunit D3868_13500 PF02548 Ketopantoate hydroxymethyltransferase D3868_13505 PF01165 Ribosomal protein S21 D3868_13510 PF01327 Polypeptide deformylase D3868_13520 PF04993 TfoX N-terminal domain D3868_13520 PF04994 TfoX C-terminal domain D3868_13535 PF02511 Thymidylate synthase complementing protein D3868_13560 PF02653 Branched-chain amino acid transport system / permease component D3868_13565 PF00005 ABC transporter D3868_13570 PF00999 Sodium/hydrogen exchanger family D3868_13570 PF02254 TrkA-N domain D3868_13575 PF01883 Iron-sulfur cluster assembly protein D3868_13575 PF10609 NUBPL iron-transfer P-loop NTPase D3868_13580 PF01145 SPFH domain / Band 7 family D3868_13580 PF12221 Bacterial membrane protein N terminal D3868_13585 PF01145 SPFH domain / Band 7 family D3868_13595 PF13180 PDZ domain D3868_13615 PF00155 Aminotransferase class I and II D3868_13620 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain D3868_13620 PF00205 Thiamine pyrophosphate enzyme, central domain D3868_13620 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain D3868_13625 PF10369 Small subunit of acetolactate synthase D3868_13630 PF07991 Acetohydroxy acid isomeroreductase, NADPH-binding domain D3868_13630 PF01450 Acetohydroxy acid isomeroreductase, catalytic domain D3868_13635 PF01895 PhoU domain D3868_13640 PF03350 Uncharacterized protein family, UPF0114 D3868_13650 PF04085 rod shape-determining protein MreC D3868_13660 PF03717 Penicillin-binding Protein dimerisation domain D3868_13660 PF00905 Penicillin binding protein transpeptidase domain D3868_13665 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain D3868_13665 PF00672 HAMP domain D3868_13700 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region D3868_13705 PF01048 Phosphorylase superfamily D3868_13710 PF01791 DeoC/LacD family aldolase D3868_13715 PF00591 Glycosyl transferase family, a/b domain D3868_13715 PF02885 Glycosyl transferase family, helical bundle domain D3868_13715 PF07831 Pyrimidine nucleoside phosphorylase C-terminal domain D3868_13725 PF00892 EamA-like transporter family D3868_13745 PF00005 ABC transporter D3868_13745 PF12399 Branched-chain amino acid ATP-binding cassette transporter D3868_13750 PF00005 ABC transporter D3868_13760 PF00654 Voltage gated chloride channel D3868_13765 PF03976 Polyphosphate kinase 2 (PPK2) D3868_13770 PF03976 Polyphosphate kinase 2 (PPK2) D3868_13775 PF00128 Alpha amylase, catalytic domain D3868_13775 PF11896 Domain of unknown function (DUF3416) D3868_13785 PF01590 GAF domain D3868_13785 PF00989 PAS fold D3868_13785 PF00990 Diguanylate cyclase, GGDEF domain D3868_13785 PF00563 EAL domain D3868_13790 PF01315 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain D3868_13790 PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase D3868_13795 PF02586 SOS response associated peptidase (SRAP) D3868_13805 PF00072 Response regulator receiver domain D3868_13810 PF04226 Transglycosylase associated protein D3868_13815 PF00834 Ribulose-phosphate 3 epimerase family D3868_13820 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family D3868_13820 PF03459 TOBE domain D3868_13825 PF00107 Zinc-binding dehydrogenase D3868_13825 PF08240 Alcohol dehydrogenase GroES-like domain D3868_13830 PF01638 HxlR-like helix-turn-helix D3868_13840 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase D3868_13840 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase D3868_13850 PF00291 Pyridoxal-phosphate dependent enzyme D3868_13860 PF13419 Haloacid dehalogenase-like hydrolase D3868_13875 PF00994 Probable molybdopterin binding domain D3868_13880 PF11614 IG-like fold at C-terminal of FixG, putative oxidoreductase D3868_13880 PF12801 4Fe-4S binding domain D3868_13880 PF13746 4Fe-4S dicluster domain D3868_13885 PF04304 Protein of unknown function (DUF454) D3868_13890 PF09335 SNARE associated Golgi protein D3868_13895 PF00989 PAS fold D3868_13895 PF00512 His Kinase A (phospho-acceptor) domain D3868_13895 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase D3868_13900 PF00224 Pyruvate kinase, barrel domain D3868_13900 PF02887 Pyruvate kinase, alpha/beta domain D3868_13905 PF00416 Ribosomal protein S13/S18 D3868_13910 PF00411 Ribosomal protein S11 D3868_13915 PF03118 Bacterial RNA polymerase, alpha chain C terminal domain D3868_13915 PF01000 RNA polymerase Rpb3/RpoA insert domain D3868_13915 PF01193 RNA polymerase Rpb3/Rpb11 dimerisation domain D3868_13920 PF01196 Ribosomal protein L17 D3868_13925 PF09335 SNARE associated Golgi protein D3868_13940 PF00004 ATPase family associated with various cellular activities (AAA) D3868_13940 PF16193 AAA C-terminal domain D3868_13940 PF12002 MgsA AAA+ ATPase C terminal D3868_13955 PF00849 RNA pseudouridylate synthase D3868_13955 PF01479 S4 domain D3868_13960 PF00392 Bacterial regulatory proteins, gntR family D3868_13960 PF07729 FCD domain D3868_13965 PF03594 Benzoate membrane transport protein D3868_13970 PF13419 Haloacid dehalogenase-like hydrolase D3868_13990 PF01571 Aminomethyltransferase folate-binding domain D3868_13995 PF01272 Transcription elongation factor, GreA/GreB, C-term D3868_13995 PF14760 Rnk N-terminus D3868_14000 PF00005 ABC transporter D3868_14040 PF00072 Response regulator receiver domain D3868_14040 PF00990 Diguanylate cyclase, GGDEF domain D3868_14090 PF00239 Resolvase, N terminal domain D3868_14090 PF02796 Helix-turn-helix domain of resolvase D3868_14145 PF02384 N-6 DNA Methylase D3868_14215 PF13229 Right handed beta helix region D3868_14215 PF00353 RTX calcium-binding nonapeptide repeat (4 copies) D3868_14215 PF12708 Pectate lyase superfamily protein D3868_14260 PF02371 Transposase IS116/IS110/IS902 family D3868_14260 PF01548 Transposase D3868_14275 PF00171 Aldehyde dehydrogenase family D3868_14280 PF01970 Tripartite tricarboxylate transporter TctA family D3868_14300 PF00701 Dihydrodipicolinate synthetase family D3868_14305 PF09339 IclR helix-turn-helix domain D3868_14305 PF01614 Bacterial transcriptional regulator D3868_14310 PF02733 Dak1 domain D3868_14310 PF02734 DAK2 domain D3868_14330 PF02311 AraC-like ligand binding domain D3868_14330 PF12833 Helix-turn-helix domain D3868_14345 PF00529 HlyD membrane-fusion protein of T1SS D3868_14345 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion D3868_14350 PF00873 AcrB/AcrD/AcrF family D3868_14360 PF00107 Zinc-binding dehydrogenase D3868_14360 PF08240 Alcohol dehydrogenase GroES-like domain D3868_14365 PF03480 Bacterial extracellular solute-binding protein, family 7 D3868_14375 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component D3868_14380 PF08666 SAF domain D3868_14380 PF04295 D-galactarate dehydratase / Altronate hydrolase, C terminus D3868_14385 PF08125 Mannitol dehydrogenase C-terminal domain D3868_14385 PF01232 Mannitol dehydrogenase Rossmann domain D3868_14405 PF16868 NMT1-like family D3868_14410 PF00756 Putative esterase D3868_14415 PF08240 Alcohol dehydrogenase GroES-like domain D3868_14415 PF00107 Zinc-binding dehydrogenase D3868_14420 PF03466 LysR substrate binding domain D3868_14420 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family D3868_14425 PF04143 Sulphur transport D3868_14430 PF00999 Sodium/hydrogen exchanger family D3868_14440 PF08402 TOBE domain D3868_14440 PF00005 ABC transporter D3868_14445 PF00528 Binding-protein-dependent transport system inner membrane component D3868_14465 PF00768 D-alanyl-D-alanine carboxypeptidase D3868_14465 PF07943 Penicillin-binding protein 5, C-terminal domain D3868_14490 PF17149 Periplasmic sensor domain found in signal transduction proteins D3868_14490 PF00672 HAMP domain D3868_14490 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase D3868_14490 PF01627 Hpt domain D3868_14490 PF00072 Response regulator receiver domain D3868_14490 PF00512 His Kinase A (phospho-acceptor) domain D3868_14510 PF02446 4-alpha-glucanotransferase D3868_14515 PF00128 Alpha amylase, catalytic domain D3868_14525 PF00072 Response regulator receiver domain D3868_14525 PF00486 Transcriptional regulatory protein, C terminal D3868_14540 PF02798 Glutathione S-transferase, N-terminal domain D3868_14540 PF00043 Glutathione S-transferase, C-terminal domain D3868_14545 PF00106 short chain dehydrogenase D3868_14550 PF13193 AMP-binding enzyme C-terminal domain D3868_14550 PF00501 AMP-binding enzyme D3868_14560 PF02653 Branched-chain amino acid transport system / permease component D3868_14570 PF00005 ABC transporter D3868_14575 PF12399 Branched-chain amino acid ATP-binding cassette transporter D3868_14575 PF00005 ABC transporter D3868_14580 PF07683 Cobalamin synthesis protein cobW C-terminal domain D3868_14580 PF02492 CobW/HypB/UreG, nucleotide-binding domain D3868_14585 PF02514 CobN/Magnesium Chelatase D3868_14590 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain D3868_14595 PF02570 Precorrin-8X methylmutase D3868_14600 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases D3868_14605 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases D3868_14610 PF02571 Precorrin-6x reductase CbiJ/CobK D3868_14615 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases D3868_14625 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases D3868_14630 PF01888 CbiD D3868_14635 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases D3868_14640 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain D3868_14640 PF07685 CobB/CobQ-like glutamine amidotransferase domain D3868_14645 PF00881 Nitroreductase family D3868_14655 PF00440 Bacterial regulatory proteins, tetR family D3868_14660 PF02627 Carboxymuconolactone decarboxylase family D3868_14665 PF00155 Aminotransferase class I and II D3868_14665 PF00392 Bacterial regulatory proteins, gntR family D3868_14670 PF02872 5'-nucleotidase, C-terminal domain D3868_14670 PF00149 Calcineurin-like phosphoesterase D3868_14675 PF00512 His Kinase A (phospho-acceptor) domain D3868_14675 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase D3868_14695 PF07559 Flagellar basal body protein FlaE D3868_14695 PF06429 Flagellar basal body rod FlgEFG protein C-terminal D3868_14695 PF00460 Flagella basal body rod protein D3868_14720 PF03739 Lipopolysaccharide export system permease LptF/LptG D3868_14725 PF00672 HAMP domain D3868_14725 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain D3868_14730 PF00005 ABC transporter D3868_14740 PF02653 Branched-chain amino acid transport system / permease component D3868_14745 PF03734 L,D-transpeptidase catalytic domain D3868_14745 PF01476 LysM domain D3868_14765 PF02627 Carboxymuconolactone decarboxylase family D3868_14800 PF00232 Glycosyl hydrolase family 1 D3868_14810 PF01923 Cobalamin adenosyltransferase D3868_14815 PF01012 Electron transfer flavoprotein domain D3868_14820 PF00766 Electron transfer flavoprotein FAD-binding domain D3868_14820 PF01012 Electron transfer flavoprotein domain D3868_14825 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain D3868_14825 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain D3868_14835 PF08534 Redoxin D3868_14840 PF00206 Lyase D3868_14840 PF14698 Argininosuccinate lyase C-terminal D3868_14850 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain D3868_14850 PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain D3868_14870 PF01098 Cell cycle protein D3868_14875 PF00072 Response regulator receiver domain D3868_14875 PF00512 His Kinase A (phospho-acceptor) domain D3868_14875 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase D3868_14875 PF08448 PAS fold D3868_14875 PF13188 PAS domain D3868_14880 PF00072 Response regulator receiver domain D3868_14880 PF00486 Transcriptional regulatory protein, C terminal D3868_14900 PF00571 CBS domain D3868_14900 PF03471 Transporter associated domain D3868_14900 PF01595 Cyclin M transmembrane N-terminal domain D3868_14905 PF06055 Exopolysaccharide synthesis, ExoD D3868_14910 PF13492 GAF domain D3868_14910 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase D3868_14910 PF00512 His Kinase A (phospho-acceptor) domain D3868_14910 PF02702 Osmosensitive K+ channel His kinase sensor domain D3868_14910 PF13493 Domain of unknown function (DUF4118) D3868_14920 PF00072 Response regulator receiver domain D3868_14935 PF01048 Phosphorylase superfamily D3868_14945 PF13249 Squalene-hopene cyclase N-terminal domain D3868_14945 PF13243 Squalene-hopene cyclase C-terminal domain D3868_14970 PF01370 NAD dependent epimerase/dehydratase family D3868_14975 PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase D3868_14975 PF01315 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain D3868_14980 PF00941 FAD binding domain in molybdopterin dehydrogenase D3868_14980 PF03450 CO dehydrogenase flavoprotein C-terminal domain D3868_14985 PF01799 [2Fe-2S] binding domain D3868_14985 PF00111 2Fe-2S iron-sulfur cluster binding domain D3868_14990 PF03466 LysR substrate binding domain D3868_14990 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family D3868_15000 PF02515 CoA-transferase family III D3868_15010 PF03328 HpcH/HpaI aldolase/citrate lyase family D3868_15015 PF02771 Acyl-CoA dehydrogenase, N-terminal domain D3868_15015 PF02770 Acyl-CoA dehydrogenase, middle domain D3868_15015 PF00441 Acyl-CoA dehydrogenase, C-terminal domain D3868_15055 PF13439 Glycosyltransferase Family 4 D3868_15055 PF00534 Glycosyl transferases group 1 D3868_15060 PF00535 Glycosyl transferase family 2 D3868_15075 PF04055 Radical SAM superfamily D3868_15080 PF00579 tRNA synthetases class I (W and Y) D3868_15085 PF00072 Response regulator receiver domain D3868_15085 PF01627 Hpt domain D3868_15085 PF17149 Periplasmic sensor domain found in signal transduction proteins D3868_15085 PF00512 His Kinase A (phospho-acceptor) domain D3868_15085 PF00672 HAMP domain D3868_15085 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase D3868_15100 PF13378 Enolase C-terminal domain-like D3868_15105 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family D3868_15105 PF03466 LysR substrate binding domain D3868_15110 PF13417 Glutathione S-transferase, N-terminal domain D3868_15115 PF12706 Beta-lactamase superfamily domain D3868_15165 PF07969 Amidohydrolase family D3868_15175 PF00857 Isochorismatase family D3868_15180 PF00512 His Kinase A (phospho-acceptor) domain D3868_15180 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase D3868_15180 PF00989 PAS fold D3868_15180 PF08447 PAS fold D3868_15180 PF13493 Domain of unknown function (DUF4118) D3868_15180 PF13426 PAS domain D3868_15185 PF00072 Response regulator receiver domain D3868_15185 PF00196 Bacterial regulatory proteins, luxR family D3868_15190 PF00561 alpha/beta hydrolase fold D3868_15195 PF00990 Diguanylate cyclase, GGDEF domain D3868_15195 PF03707 Bacterial signalling protein N terminal repeat D3868_15195 PF00563 EAL domain D3868_15205 PF02421 Ferrous iron transport protein B D3868_15205 PF07664 Ferrous iron transport protein B C terminus D3868_15205 PF07670 Nucleoside recognition D3868_15225 PF00712 DNA polymerase III beta subunit, N-terminal domain D3868_15225 PF02767 DNA polymerase III beta subunit, central domain D3868_15225 PF02768 DNA polymerase III beta subunit, C-terminal domain D3868_15230 PF02463 RecF/RecN/SMC N terminal domain D3868_15235 PF01751 Toprim domain D3868_15235 PF00986 DNA gyrase B subunit, carboxyl terminus D3868_15235 PF00204 DNA gyrase B D3868_15235 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase D3868_15255 PF00005 ABC transporter D3868_15255 PF00664 ABC transporter transmembrane region D3868_15260 PF01032 FecCD transport family D3868_15270 PF00005 ABC transporter D3868_15275 PF07715 TonB-dependent Receptor Plug Domain D3868_15275 PF00593 TonB dependent receptor D3868_15285 PF03466 LysR substrate binding domain D3868_15285 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family D3868_15290 PF07690 Major Facilitator Superfamily D3868_15305 PF00528 Binding-protein-dependent transport system inner membrane component D3868_15315 PF00005 ABC transporter D3868_15320 PF00135 Carboxylesterase family D3868_15325 PF02423 Ornithine cyclodeaminase/mu-crystallin family D3868_15330 PF00672 HAMP domain D3868_15330 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain D3868_15335 PF00795 Carbon-nitrogen hydrolase D3868_15335 PF02540 NAD synthase D3868_15360 PF00005 ABC transporter D3868_15370 PF00528 Binding-protein-dependent transport system inner membrane component D3868_15380 PF07729 FCD domain D3868_15380 PF00392 Bacterial regulatory proteins, gntR family D3868_15385 PF13823 Alcohol dehydrogenase GroES-associated D3868_15385 PF08240 Alcohol dehydrogenase GroES-like domain D3868_15385 PF00107 Zinc-binding dehydrogenase D3868_15395 PF04328 Selenoprotein, putative D3868_15400 PF13722 5TM C-terminal transporter carbon starvation CstA D3868_15400 PF02554 Carbon starvation protein CstA D3868_15425 PF07715 TonB-dependent Receptor Plug Domain D3868_15425 PF00593 TonB dependent receptor D3868_15430 PF00356 Bacterial regulatory proteins, lacI family D3868_15435 PF00106 short chain dehydrogenase D3868_15440 PF02515 CoA-transferase family III D3868_15450 PF00378 Enoyl-CoA hydratase/isomerase D3868_15460 PF00171 Aldehyde dehydrogenase family D3868_15470 PF00528 Binding-protein-dependent transport system inner membrane component D3868_15475 PF00528 Binding-protein-dependent transport system inner membrane component D3868_15480 PF17912 MalK OB fold domain D3868_15480 PF00005 ABC transporter D3868_15495 PF00664 ABC transporter transmembrane region D3868_15495 PF03412 Peptidase C39 family D3868_15495 PF00005 ABC transporter D3868_15500 PF00529 HlyD membrane-fusion protein of T1SS D3868_15505 PF13458 Periplasmic binding protein D3868_15540 PF00005 ABC transporter D3868_15550 PF00005 ABC transporter D3868_15550 PF00664 ABC transporter transmembrane region D3868_15555 PF16363 GDP-mannose 4,6 dehydratase D3868_15580 PF03334 Na+/H+ antiporter subunit D3868_15585 PF04066 Multiple resistance and pH regulation protein F (MrpF / PhaF) D3868_15590 PF01899 Na+/H+ ion antiporter subunit D3868_15595 PF00361 Proton-conducting membrane transporter D3868_15600 PF00420 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L D3868_15605 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus D3868_15605 PF00361 Proton-conducting membrane transporter D3868_15605 PF04039 Domain related to MnhB subunit of Na+/H+ antiporter D3868_15605 PF13244 Domain of unknown function (DUF4040) D3868_15610 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 D3868_15615 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain D3868_15615 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain D3868_15615 PF01842 ACT domain D3868_15620 PF01259 SAICAR synthetase D3868_15625 PF01648 4'-phosphopantetheinyl transferase superfamily D3868_15635 PF02113 D-Ala-D-Ala carboxypeptidase 3 (S13) family D3868_15640 PF03975 CheD chemotactic sensory transduction D3868_15645 PF01209 ubiE/COQ5 methyltransferase family D3868_15665 PF02261 Aspartate decarboxylase D3868_15675 PF01739 CheR methyltransferase, SAM binding domain D3868_15675 PF03705 CheR methyltransferase, all-alpha domain D3868_15685 PF00672 HAMP domain D3868_15685 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain D3868_15685 PF02203 Tar ligand binding domain homologue D3868_15690 PF01627 Hpt domain D3868_15690 PF00072 Response regulator receiver domain D3868_15690 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase D3868_15690 PF01584 CheW-like domain D3868_15695 PF01339 CheB methylesterase D3868_15695 PF00072 Response regulator receiver domain D3868_15700 PF00072 Response regulator receiver domain D3868_15700 PF00486 Transcriptional regulatory protein, C terminal D3868_15705 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase D3868_15705 PF00512 His Kinase A (phospho-acceptor) domain D3868_15710 PF02634 FdhD/NarQ family D3868_15715 PF01292 Prokaryotic cytochrome b561 D3868_15720 PF13247 4Fe-4S dicluster domain D3868_15720 PF09163 Formate dehydrogenase N, transmembrane D3868_15725 PF00384 Molybdopterin oxidoreductase D3868_15725 PF04879 Molybdopterin oxidoreductase Fe4S4 domain D3868_15725 PF01568 Molydopterin dinucleotide binding domain D3868_15730 PF04216 Protein involved in formate dehydrogenase formation D3868_15735 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase D3868_15735 PF13188 PAS domain D3868_15735 PF08448 PAS fold D3868_15735 PF00072 Response regulator receiver domain D3868_15735 PF00512 His Kinase A (phospho-acceptor) domain D3868_15740 PF00072 Response regulator receiver domain D3868_15740 PF00158 Sigma-54 interaction domain D3868_15740 PF02954 Bacterial regulatory protein, Fis family D3868_15745 PF00596 Class II Aldolase and Adducin N-terminal domain D3868_15750 PF01361 Tautomerase enzyme D3868_15790 PF00149 Calcineurin-like phosphoesterase D3868_15790 PF12320 Type 5 capsule protein repressor C-terminal domain D3868_15800 PF00089 Trypsin D3868_15810 PF13614 AAA domain D3868_15815 PF02195 ParB-like nuclease domain D3868_15815 PF17762 HTH domain found in ParB protein D3868_15830 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family D3868_15830 PF03466 LysR substrate binding domain D3868_15835 PF01042 Endoribonuclease L-PSP D3868_15840 PF08281 Sigma-70, region 4 D3868_15840 PF04542 Sigma-70 region 2 D3868_15850 PF08376 Nitrate and nitrite sensing D3868_15850 PF03861 ANTAR domain D3868_15855 PF00005 ABC transporter D3868_15860 PF00528 Binding-protein-dependent transport system inner membrane component D3868_15870 PF07992 Pyridine nucleotide-disulphide oxidoreductase D3868_15870 PF04324 BFD-like [2Fe-2S] binding domain D3868_15870 PF01077 Nitrite and sulphite reductase 4Fe-4S domain D3868_15870 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain D3868_15870 PF18267 Rubredoxin NAD+ reductase C-terminal domain D3868_15875 PF00355 Rieske [2Fe-2S] domain D3868_15885 PF10414 Sirohaem synthase dimerisation region D3868_15885 PF14824 Sirohaem biosynthesis protein central D3868_15885 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases D3868_15890 PF00877 NlpC/P60 family D3868_15900 PF08497 Radical SAM N-terminal D3868_15900 PF04055 Radical SAM superfamily D3868_15900 PF11842 Domain of unknown function (DUF3362) D3868_15945 PF08459 UvrC Helix-hairpin-helix N-terminal D3868_15945 PF12826 Helix-hairpin-helix motif D3868_15945 PF01541 GIY-YIG catalytic domain D3868_15945 PF02151 UvrB/uvrC motif D3868_15950 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family D3868_15950 PF00356 Bacterial regulatory proteins, lacI family D3868_15955 PF03466 LysR substrate binding domain D3868_15955 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family D3868_15965 PF00576 HIUase/Transthyretin family D3868_15970 PF01014 Uricase D3868_15970 PF09349 OHCU decarboxylase D3868_15975 PF07687 Peptidase dimerisation domain D3868_15975 PF01546 Peptidase family M20/M25/M40 D3868_15980 PF01546 Peptidase family M20/M25/M40 D3868_15980 PF07687 Peptidase dimerisation domain D3868_15985 PF00478 IMP dehydrogenase / GMP reductase domain D3868_15990 PF03275 UDP-galactopyranose mutase D3868_15995 PF01729 Quinolinate phosphoribosyl transferase, C-terminal domain D3868_15995 PF02749 Quinolinate phosphoribosyl transferase, N-terminal domain D3868_16000 PF00890 FAD binding domain D3868_16000 PF02910 Fumarate reductase flavoprotein C-term D3868_16005 PF02445 Quinolinate synthetase A protein D3868_16040 PF01568 Molydopterin dinucleotide binding domain D3868_16040 PF00384 Molybdopterin oxidoreductase D3868_16040 PF04879 Molybdopterin oxidoreductase Fe4S4 domain D3868_16045 PF13247 4Fe-4S dicluster domain D3868_16050 PF01292 Prokaryotic cytochrome b561 D3868_16055 PF01546 Peptidase family M20/M25/M40 D3868_16055 PF07687 Peptidase dimerisation domain D3868_16075 PF00005 ABC transporter D3868_16080 PF00528 Binding-protein-dependent transport system inner membrane component D3868_16120 PF00486 Transcriptional regulatory protein, C terminal D3868_16120 PF00072 Response regulator receiver domain D3868_16125 PF00512 His Kinase A (phospho-acceptor) domain D3868_16125 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase D3868_16125 PF00672 HAMP domain D3868_16130 PF02417 Chromate transporter D3868_16145 PF00043 Glutathione S-transferase, C-terminal domain D3868_16145 PF13417 Glutathione S-transferase, N-terminal domain D3868_16155 PF01645 Conserved region in glutamate synthase D3868_16155 PF01493 GXGXG motif D3868_16155 PF00310 Glutamine amidotransferases class-II D3868_16155 PF04898 Glutamate synthase central domain D3868_16160 PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster D3868_16160 PF07992 Pyridine nucleotide-disulphide oxidoreductase D3868_16170 PF02673 Bacitracin resistance protein BacA D3868_16175 PF07690 Major Facilitator Superfamily D3868_16180 PF04321 RmlD substrate binding domain D3868_16190 PF00570 HRDC domain D3868_16190 PF01612 3'-5' exonuclease D3868_16195 PF00571 CBS domain D3868_16195 PF01380 SIS domain D3868_16210 PF00005 ABC transporter D3868_16215 PF00309 Sigma-54 factor, Activator interacting domain (AID) D3868_16215 PF04963 Sigma-54 factor, core binding domain D3868_16215 PF04552 Sigma-54, DNA binding domain D3868_16220 PF02482 Sigma 54 modulation protein / S30EA ribosomal protein D3868_16220 PF16321 Sigma 54 modulation/S30EA ribosomal protein C terminus D3868_16225 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 D3868_16230 PF08241 Methyltransferase domain D3868_16235 PF13840 ACT domain D3868_16235 PF01842 ACT domain D3868_16235 PF00696 Amino acid kinase family D3868_16240 PF03060 Nitronate monooxygenase D3868_16245 PF02896 PEP-utilising enzyme, TIM barrel domain D3868_16245 PF01590 GAF domain D3868_16245 PF05524 PEP-utilising enzyme, N-terminal D3868_16245 PF00391 PEP-utilising enzyme, mobile domain D3868_16255 PF04551 GcpE protein D3868_16260 PF00745 Glutamyl-tRNAGlu reductase, dimerisation domain D3868_16260 PF01488 Shikimate / quinate 5-dehydrogenase D3868_16260 PF05201 Glutamyl-tRNAGlu reductase, N-terminal domain D3868_16265 PF00472 RF-1 domain D3868_16265 PF03462 PCRF domain D3868_16270 PF04480 Protein of unknown function (DUF559) D3868_16275 PF13847 Methyltransferase domain D3868_16275 PF17827 PrmC N-terminal domain D3868_16290 PF00293 NUDIX domain D3868_16290 PF13344 Haloacid dehalogenase-like hydrolase D3868_16295 PF10431 C-terminal, D2-small domain, of ClpB protein D3868_16295 PF07724 AAA domain (Cdc48 subfamily) D3868_16295 PF17871 AAA lid domain D3868_16295 PF02861 Clp amino terminal domain, pathogenicity island component D3868_16295 PF00004 ATPase family associated with various cellular activities (AAA) D3868_16300 PF03006 Haemolysin-III related D3868_16305 PF03591 AzlC protein D3868_16320 PF00672 HAMP domain D3868_16320 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain D3868_16325 PF00664 ABC transporter transmembrane region D3868_16325 PF00005 ABC transporter D3868_16345 PF00830 Ribosomal L28 family D3868_16355 PF02631 RecX family D3868_16360 PF01061 ABC-2 type transporter D3868_16365 PF00202 Aminotransferase class-III D3868_16370 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain D3868_16370 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain D3868_16375 PF01430 Hsp33 protein D3868_16385 PF00670 S-adenosyl-L-homocysteine hydrolase, NAD binding domain D3868_16385 PF05221 S-adenosyl-L-homocysteine hydrolase D3868_16390 PF01569 PAP2 superfamily D3868_16405 PF02885 Glycosyl transferase family, helical bundle domain D3868_16405 PF00591 Glycosyl transferase family, a/b domain D3868_16410 PF00593 TonB dependent receptor D3868_16410 PF07715 TonB-dependent Receptor Plug Domain D3868_16415 PF18331 PKHD-type hydroxylase C-terminal domain D3868_16415 PF13640 2OG-Fe(II) oxygenase superfamily D3868_16425 PF01070 FMN-dependent dehydrogenase D3868_16430 PF00005 ABC transporter D3868_16435 PF01032 FecCD transport family D3868_16440 PF01032 FecCD transport family D3868_16445 PF01497 Periplasmic binding protein D3868_16450 PF03551 Transcriptional regulator PadR-like family D3868_16465 PF01627 Hpt domain D3868_16465 PF00072 Response regulator receiver domain D3868_16465 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) D3868_16465 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase D3868_16465 PF00672 HAMP domain D3868_16465 PF00512 His Kinase A (phospho-acceptor) domain D3868_16470 PF00072 Response regulator receiver domain D3868_16510 PF00005 ABC transporter D3868_16515 PF01032 FecCD transport family D3868_16525 PF07715 TonB-dependent Receptor Plug Domain D3868_16525 PF00593 TonB dependent receptor D3868_16540 PF03741 Integral membrane protein TerC family D3868_16565 PF10503 Esterase PHB depolymerase D3868_16575 PF05974 Domain of unknown function (DUF892) D3868_16580 PF00919 Uncharacterized protein family UPF0004 D3868_16580 PF04055 Radical SAM superfamily D3868_16605 PF00474 Sodium:solute symporter family D3868_16610 PF03480 Bacterial extracellular solute-binding protein, family 7 D3868_16620 PF00753 Metallo-beta-lactamase superfamily D3868_16625 PF02082 Transcriptional regulator D3868_16640 PF00528 Binding-protein-dependent transport system inner membrane component D3868_16645 PF00528 Binding-protein-dependent transport system inner membrane component D3868_16650 PF12857 TOBE-like domain D3868_16650 PF17850 CysA C-terminal regulatory domain D3868_16650 PF00005 ABC transporter D3868_16665 PF02080 TrkA-C domain D3868_16665 PF02254 TrkA-N domain D3868_16665 PF00999 Sodium/hydrogen exchanger family D3868_16670 PF00072 Response regulator receiver domain D3868_16670 PF00486 Transcriptional regulatory protein, C terminal D3868_16695 PF02540 NAD synthase D3868_16700 PF00733 Asparagine synthase D3868_16700 PF13537 Glutamine amidotransferase domain D3868_16705 PF00501 AMP-binding enzyme D3868_16705 PF13193 AMP-binding enzyme C-terminal domain D3868_16725 PF00534 Glycosyl transferases group 1 D3868_16725 PF00862 Sucrose synthase D3868_16730 PF13439 Glycosyltransferase Family 4 D3868_16730 PF00534 Glycosyl transferases group 1 D3868_16735 PF00535 Glycosyl transferase family 2 D3868_16745 PF02397 Bacterial sugar transferase D3868_16755 PF00150 Cellulase (glycosyl hydrolase family 5) D3868_16755 PF00553 Cellulose binding domain D3868_16765 PF00331 Glycosyl hydrolase family 10 D3868_16770 PF13614 AAA domain D3868_16770 PF13807 G-rich domain on putative tyrosine kinase D3868_16770 PF02706 Chain length determinant protein D3868_16775 PF03808 Glycosyl transferase WecB/TagA/CpsF family D3868_16785 PF00270 DEAD/DEAH box helicase D3868_16785 PF00271 Helicase conserved C-terminal domain D3868_16785 PF17191 RecG wedge domain D3868_16790 PF00300 Histidine phosphatase superfamily (branch 1) D3868_16810 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) D3868_16810 PF00128 Alpha amylase, catalytic domain D3868_16815 PF00672 HAMP domain D3868_16815 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase D3868_16815 PF00512 His Kinase A (phospho-acceptor) domain D3868_16815 PF16767 Sensor domain of alginate biosynthesis sensor protein KinB D3868_16815 PF08448 PAS fold D3868_16825 PF03180 NLPA lipoprotein D3868_16830 PF00528 Binding-protein-dependent transport system inner membrane component D3868_16835 PF00005 ABC transporter D3868_16835 PF09383 NIL domain D3868_16840 PF00501 AMP-binding enzyme D3868_16840 PF13193 AMP-binding enzyme C-terminal domain D3868_16845 PF03180 NLPA lipoprotein D3868_16855 PF01634 ATP phosphoribosyltransferase D3868_16860 PF00815 Histidinol dehydrogenase D3868_16865 PF06793 Uncharacterised protein family (UPF0262) D3868_16870 PF01451 Low molecular weight phosphotyrosine protein phosphatase D3868_16875 PF00072 Response regulator receiver domain D3868_16875 PF01627 Hpt domain D3868_16875 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase D3868_16875 PF00672 HAMP domain D3868_16875 PF17149 Periplasmic sensor domain found in signal transduction proteins D3868_16875 PF00512 His Kinase A (phospho-acceptor) domain D3868_16885 PF01176 Translation initiation factor 1A / IF-1 D3868_16890 PF02545 Maf-like protein D3868_16895 PF00575 S1 RNA binding domain D3868_16895 PF10150 Ribonuclease E/G family D3868_16900 PF03884 DNA gyrase inhibitor YacG D3868_16930 PF13614 AAA domain D3868_16935 PF01037 Lrp/AsnC ligand binding domain D3868_16935 PF13404 AsnC-type helix-turn-helix domain D3868_16940 PF00491 Arginase family D3868_16945 PF00202 Aminotransferase class-III D3868_16960 PF00440 Bacterial regulatory proteins, tetR family D3868_16975 PF07237 Protein of unknown function (DUF1428) D3868_16985 PF00202 Aminotransferase class-III D3868_16990 PF00171 Aldehyde dehydrogenase family D3868_16995 PF07883 Cupin domain D3868_16995 PF01381 Helix-turn-helix D3868_17000 PF00528 Binding-protein-dependent transport system inner membrane component D3868_17005 PF00528 Binding-protein-dependent transport system inner membrane component D3868_17010 PF13416 Bacterial extracellular solute-binding protein D3868_17015 PF08402 TOBE domain D3868_17015 PF00005 ABC transporter D3868_17020 PF03466 LysR substrate binding domain D3868_17020 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family D3868_17025 PF02770 Acyl-CoA dehydrogenase, middle domain D3868_17025 PF02771 Acyl-CoA dehydrogenase, N-terminal domain D3868_17025 PF00441 Acyl-CoA dehydrogenase, C-terminal domain D3868_17030 PF02515 CoA-transferase family III D3868_17060 PF02080 TrkA-C domain D3868_17060 PF03600 Citrate transporter D3868_17065 PF00248 Aldo/keto reductase family D3868_17070 PF07690 Major Facilitator Superfamily D3868_17075 PF03466 LysR substrate binding domain D3868_17075 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family D3868_17085 PF00529 HlyD membrane-fusion protein of T1SS D3868_17085 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion D3868_17090 PF04632 Fusaric acid resistance protein family D3868_17095 PF07869 Protein of unknown function (DUF1656) D3868_17125 PF05433 Glycine zipper 2TM domain D3868_17125 PF16998 17 kDa outer membrane surface antigen D3868_17130 PF00501 AMP-binding enzyme D3868_17130 PF13193 AMP-binding enzyme C-terminal domain D3868_17135 PF01925 Sulfite exporter TauE/SafE D3868_17140 PF00005 ABC transporter D3868_17145 PF13411 MerR HTH family regulatory protein D3868_17150 PF02627 Carboxymuconolactone decarboxylase family D3868_17160 PF03458 UPF0126 domain D3868_17165 PF17954 Quercetinase C-terminal cupin domain D3868_17165 PF02678 Pirin D3868_17190 PF00403 Heavy-metal-associated domain D3868_17205 PF00288 GHMP kinases N terminal domain D3868_17205 PF08544 GHMP kinases C terminal D3868_17220 PF00994 Probable molybdopterin binding domain D3868_17225 PF01464 Transglycosylase SLT domain D3868_17230 PF03167 Uracil DNA glycosylase superfamily D3868_17255 PF13545 Crp-like helix-turn-helix domain D3868_17255 PF00027 Cyclic nucleotide-binding domain D3868_17305 PF05433 Glycine zipper 2TM domain D3868_17305 PF16998 17 kDa outer membrane surface antigen D3868_17315 PF01679 Proteolipid membrane potential modulator D3868_17320 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain D3868_17340 PF01475 Ferric uptake regulator family D3868_17360 PF00990 Diguanylate cyclase, GGDEF domain D3868_17360 PF00563 EAL domain D3868_17360 PF03707 Bacterial signalling protein N terminal repeat D3868_17370 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family D3868_17370 PF03466 LysR substrate binding domain D3868_17380 PF02690 Na+/Pi-cotransporter D3868_17385 PF01370 NAD dependent epimerase/dehydratase family D3868_17390 PF00072 Response regulator receiver domain D3868_17395 PF08448 PAS fold D3868_17395 PF13188 PAS domain D3868_17395 PF00512 His Kinase A (phospho-acceptor) domain D3868_17395 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase D3868_17395 PF00072 Response regulator receiver domain D3868_17405 PF00027 Cyclic nucleotide-binding domain D3868_17405 PF13545 Crp-like helix-turn-helix domain D3868_17415 PF02624 YcaO cyclodehydratase, ATP-ad Mg2+-binding D3868_17430 PF00072 Response regulator receiver domain D3868_17430 PF00211 Adenylate and Guanylate cyclase catalytic domain D3868_17440 PF01384 Phosphate transporter family D3868_17445 PF01865 Protein of unknown function DUF47 D3868_17455 PF03737 Aldolase/RraA D3868_17465 PF07690 Major Facilitator Superfamily D3868_17475 PF00330 Aconitase family (aconitate hydratase) D3868_17475 PF06434 Aconitate hydratase 2 N-terminus D3868_17475 PF11791 Aconitate B N-terminal domain D3868_17500 PF05193 Peptidase M16 inactive domain D3868_17500 PF00675 Insulinase (Peptidase family M16) D3868_17510 PF04752 ChaC-like protein D3868_17525 PF01924 Hydrogenase formation hypA family D3868_17530 PF03480 Bacterial extracellular solute-binding protein, family 7 D3868_17540 PF12848 ABC transporter D3868_17540 PF00005 ABC transporter D3868_17555 PF02525 Flavodoxin-like fold D3868_17560 PF03466 LysR substrate binding domain D3868_17560 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family D3868_17565 PF03594 Benzoate membrane transport protein D3868_17570 PF00155 Aminotransferase class I and II D3868_17570 PF00392 Bacterial regulatory proteins, gntR family D3868_17575 PF00988 Carbamoyl-phosphate synthase small chain, CPSase domain D3868_17575 PF00117 Glutamine amidotransferase class-I D3868_17580 PF09335 SNARE associated Golgi protein D3868_17585 PF00317 Ribonucleotide reductase, all-alpha domain D3868_17585 PF02867 Ribonucleotide reductase, barrel domain D3868_17585 PF03477 ATP cone domain D3868_17615 PF00005 ABC transporter D3868_17625 PF18665 Tetracyclin repressor-like, C-terminal domain D3868_17625 PF00440 Bacterial regulatory proteins, tetR family D3868_17630 PF13533 Biotin-lipoyl like D3868_17635 PF07690 Major Facilitator Superfamily D3868_17650 PF00990 Diguanylate cyclase, GGDEF domain D3868_17650 PF08448 PAS fold D3868_17650 PF00563 EAL domain D3868_17650 PF08447 PAS fold D3868_17660 PF00521 DNA gyrase/topoisomerase IV, subunit A D3868_17660 PF03989 DNA gyrase C-terminal domain, beta-propeller D3868_17665 PF03480 Bacterial extracellular solute-binding protein, family 7 D3868_17670 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component D3868_17680 PF04376 Arginine-tRNA-protein transferase, N terminus D3868_17680 PF04377 Arginine-tRNA-protein transferase, C terminus D3868_17685 PF14403 Circularly permuted ATP-grasp type 2 D3868_17685 PF04168 A predicted alpha-helical domain with a conserved ER motif. D3868_17690 PF14403 Circularly permuted ATP-grasp type 2 D3868_17695 PF00691 OmpA family D3868_17695 PF13677 Membrane MotB of proton-channel complex MotA/MotB D3868_17700 PF01613 Flavin reductase like domain D3868_17705 PF00291 Pyridoxal-phosphate dependent enzyme D3868_17705 PF13291 ACT domain D3868_17710 PF01804 Penicillin amidase D3868_17725 PF10090 Histidine phosphotransferase C-terminal domain D3868_17730 PF01627 Hpt domain D3868_17730 PF07194 P2 response regulator binding domain D3868_17730 PF02895 Signal transducing histidine kinase, homodimeric domain D3868_17730 PF01584 CheW-like domain D3868_17730 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase D3868_17735 PF01584 CheW-like domain D3868_17740 PF01339 CheB methylesterase D3868_17740 PF00072 Response regulator receiver domain D3868_17750 PF01739 CheR methyltransferase, SAM binding domain D3868_17750 PF03705 CheR methyltransferase, all-alpha domain D3868_17755 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family D3868_17755 PF03466 LysR substrate binding domain D3868_17765 PF00072 Response regulator receiver domain D3868_17765 PF00486 Transcriptional regulatory protein, C terminal D3868_17770 PF18269 T3SS EscN ATPase C-terminal domain D3868_17770 PF02874 ATP synthase alpha/beta family, beta-barrel domain D3868_17770 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain D3868_17780 PF00563 EAL domain D3868_17780 PF00990 Diguanylate cyclase, GGDEF domain D3868_17780 PF03707 Bacterial signalling protein N terminal repeat D3868_17785 PF14489 QueF-like protein D3868_17795 PF10609 NUBPL iron-transfer P-loop NTPase D3868_17800 PF00448 SRP54-type protein, GTPase domain D3868_17800 PF02881 SRP54-type protein, helical bundle domain D3868_17805 PF00771 FHIPEP family D3868_17810 PF02954 Bacterial regulatory protein, Fis family D3868_17810 PF00158 Sigma-54 interaction domain D3868_17815 PF01618 MotA/TolQ/ExbB proton channel family D3868_17820 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term D3868_17830 PF08345 Flagellar M-ring protein C-terminal D3868_17830 PF01514 Secretory protein of YscJ/FliF family D3868_17835 PF01381 Helix-turn-helix D3868_17840 PF00155 Aminotransferase class I and II D3868_17845 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase D3868_17845 PF00512 His Kinase A (phospho-acceptor) domain D3868_17850 PF17973 Bacterial Alpha-2-macroglobulin MG10 domain D3868_17850 PF11974 Bacterial alpha-2-macroglobulin MG3 domain D3868_17850 PF17970 Bacterial Alpha-2-macroglobulin MG1 domain D3868_17850 PF17972 Bacterial Alpha-2-macroglobulin MG5 domain D3868_17850 PF17962 Bacterial macroglobulin domain 6 D3868_17850 PF01835 MG2 domain D3868_17850 PF00207 Alpha-2-macroglobulin family D3868_17850 PF07703 Alpha-2-macroglobulin bait region domain D3868_17860 PF00376 MerR family regulatory protein D3868_17860 PF09278 MerR, DNA binding D3868_17865 PF00108 Thiolase, N-terminal domain D3868_17865 PF02803 Thiolase, C-terminal domain D3868_17870 PF00378 Enoyl-CoA hydratase/isomerase D3868_17870 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain D3868_17870 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain D3868_17875 PF02771 Acyl-CoA dehydrogenase, N-terminal domain D3868_17875 PF02770 Acyl-CoA dehydrogenase, middle domain D3868_17875 PF12806 Acetyl-CoA dehydrogenase C-terminal like D3868_17875 PF00441 Acyl-CoA dehydrogenase, C-terminal domain D3868_17880 PF00072 Response regulator receiver domain D3868_17880 PF00196 Bacterial regulatory proteins, luxR family D3868_17890 PF03922 OmpW family D3868_17900 PF01266 FAD dependent oxidoreductase D3868_17905 PF02463 RecF/RecN/SMC N terminal domain D3868_17920 PF10576 Iron-sulfur binding domain of endonuclease III D3868_17920 PF00633 Helix-hairpin-helix motif D3868_17920 PF14815 NUDIX domain D3868_17920 PF00730 HhH-GPD superfamily base excision DNA repair protein D3868_17935 PF00072 Response regulator receiver domain D3868_17935 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase D3868_17935 PF00512 His Kinase A (phospho-acceptor) domain D3868_17935 PF13188 PAS domain D3868_17935 PF08448 PAS fold D3868_17945 PF01555 DNA methylase D3868_17945 PF18755 Restriction Enzyme Adenine Methylase Associated D3868_17950 PF01351 Ribonuclease HII D3868_17955 PF13302 Acetyltransferase (GNAT) domain D3868_17955 PF00027 Cyclic nucleotide-binding domain D3868_17960 PF02810 SEC-C motif D3868_17965 PF00313 'Cold-shock' DNA-binding domain D3868_17970 PF03572 Peptidase family S41 D3868_17970 PF13180 PDZ domain D3868_17975 PF02397 Bacterial sugar transferase D3868_17980 PF02769 AIR synthase related protein, C-terminal domain D3868_17980 PF00586 AIR synthase related protein, N-terminal domain D3868_17985 PF01455 HupF/HypC family D3868_17990 PF07503 HypF finger D3868_17990 PF01300 Telomere recombination D3868_17990 PF00708 Acylphosphatase D3868_17990 PF17788 HypF Kae1-like domain D3868_17995 PF01810 LysE type translocator D3868_18000 PF02492 CobW/HypB/UreG, nucleotide-binding domain D3868_18005 PF01155 Hydrogenase/urease nickel incorporation, metallochaperone, hypA D3868_18010 PF00374 Nickel-dependent hydrogenase D3868_18020 PF01455 HupF/HypC family D3868_18035 PF00753 Metallo-beta-lactamase superfamily D3868_18040 PF10996 Beta-Casp domain D3868_18040 PF00753 Metallo-beta-lactamase superfamily D3868_18040 PF07521 Zn-dependent metallo-hydrolase RNA specificity domain D3868_18045 PF01750 Hydrogenase maturation protease D3868_18050 PF00374 Nickel-dependent hydrogenase D3868_18055 PF03916 Polysulphide reductase, NrfD D3868_18060 PF13247 4Fe-4S dicluster domain D3868_18065 PF01058 NADH ubiquinone oxidoreductase, 20 Kd subunit D3868_18065 PF14720 NiFe/NiFeSe hydrogenase small subunit C-terminal D3868_18080 PF13382 Adenine deaminase C-terminal domain D3868_18080 PF01979 Amidohydrolase family D3868_18090 PF05050 Methyltransferase FkbM domain D3868_18110 PF13417 Glutathione S-transferase, N-terminal domain D3868_18110 PF00043 Glutathione S-transferase, C-terminal domain D3868_18115 PF00753 Metallo-beta-lactamase superfamily D3868_18115 PF16123 Hydroxyacylglutathione hydrolase C-terminus D3868_18135 PF07021 Methionine biosynthesis protein MetW D3868_18135 PF00561 alpha/beta hydrolase fold D3868_18140 PF00561 alpha/beta hydrolase fold D3868_18150 PF00155 Aminotransferase class I and II D3868_18155 PF02153 Prephenate dehydrogenase D3868_18170 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family D3868_18170 PF03466 LysR substrate binding domain D3868_18175 PF00578 AhpC/TSA family D3868_18175 PF10417 C-terminal domain of 1-Cys peroxiredoxin D3868_18180 PF13192 Thioredoxin domain D3868_18180 PF07992 Pyridine nucleotide-disulphide oxidoreductase D3868_18185 PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase D3868_18185 PF01315 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain D3868_18190 PF00941 FAD binding domain in molybdopterin dehydrogenase D3868_18190 PF03450 CO dehydrogenase flavoprotein C-terminal domain D3868_18195 PF00111 2Fe-2S iron-sulfur cluster binding domain D3868_18195 PF01799 [2Fe-2S] binding domain D3868_18205 PF04307 LexA-binding, inner membrane-associated putative hydrolase D3868_18215 PF07883 Cupin domain D3868_18225 PF00486 Transcriptional regulatory protein, C terminal D3868_18225 PF00072 Response regulator receiver domain D3868_18230 PF02660 Glycerol-3-phosphate acyltransferase D3868_18235 PF01979 Amidohydrolase family D3868_18240 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain D3868_18240 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain D3868_18255 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family D3868_18255 PF03466 LysR substrate binding domain D3868_18285 PF03652 Holliday junction resolvase D3868_18295 PF02686 Glu-tRNAGln amidotransferase C subunit D3868_18300 PF01425 Amidase D3868_18305 PF02637 GatB domain D3868_18305 PF02934 GatB/GatE catalytic domain D3868_18310 PF00512 His Kinase A (phospho-acceptor) domain D3868_18310 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase D3868_18340 PF01177 Asp/Glu/Hydantoin racemase D3868_18345 PF01381 Helix-turn-helix D3868_18345 PF09856 Predicted transcriptional regulator (DUF2083) D3868_18345 PF06114 IrrE N-terminal-like domain D3868_18350 PF01039 Carboxyl transferase domain D3868_18355 PF02785 Biotin carboxylase C-terminal domain D3868_18355 PF00289 Biotin carboxylase, N-terminal domain D3868_18355 PF00364 Biotin-requiring enzyme D3868_18355 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain D3868_18360 PF02632 BioY family D3868_18380 PF02954 Bacterial regulatory protein, Fis family D3868_18380 PF00072 Response regulator receiver domain D3868_18380 PF00158 Sigma-54 interaction domain D3868_18385 PF00512 His Kinase A (phospho-acceptor) domain D3868_18385 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase D3868_18390 PF00375 Sodium:dicarboxylate symporter family D3868_18395 PF01515 Phosphate acetyl/butaryl transferase D3868_18395 PF03949 Malic enzyme, NAD binding domain D3868_18395 PF00390 Malic enzyme, N-terminal domain D3868_18410 PF04403 Paraquat-inducible protein A D3868_18415 PF02470 MlaD protein D3868_18425 PF01228 Glycine radical D3868_18425 PF02901 Pyruvate formate lyase-like D3868_18430 PF00158 Sigma-54 interaction domain D3868_18430 PF13185 GAF domain D3868_18430 PF02954 Bacterial regulatory protein, Fis family D3868_18435 PF04542 Sigma-70 region 2 D3868_18435 PF04545 Sigma-70, region 4 D3868_18440 PF12973 ChrR Cupin-like domain D3868_18445 PF11799 impB/mucB/samB family C-terminal domain D3868_18445 PF00817 impB/mucB/samB family D3868_18465 PF04717 Type VI secretion system, phage-baseplate injector D3868_18470 PF00004 ATPase family associated with various cellular activities (AAA) D3868_18470 PF07724 AAA domain (Cdc48 subfamily) D3868_18470 PF17871 AAA lid domain D3868_18470 PF10431 C-terminal, D2-small domain, of ClpB protein D3868_18575 PF03350 Uncharacterized protein family, UPF0114 D3868_18590 PF03459 TOBE domain D3868_18590 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family D3868_18600 PF00528 Binding-protein-dependent transport system inner membrane component D3868_18605 PF03459 TOBE domain D3868_18605 PF00005 ABC transporter D3868_18660 PF00672 HAMP domain D3868_18660 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase D3868_18660 PF00512 His Kinase A (phospho-acceptor) domain D3868_18670 PF14310 Fibronectin type III-like domain D3868_18670 PF00933 Glycosyl hydrolase family 3 N terminal domain D3868_18670 PF01915 Glycosyl hydrolase family 3 C-terminal domain D3868_18695 PF08386 TAP-like protein D3868_18695 PF00561 alpha/beta hydrolase fold D3868_18710 PF00465 Iron-containing alcohol dehydrogenase D3868_18715 PF03480 Bacterial extracellular solute-binding protein, family 7 D3868_18725 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component D3868_18730 PF05721 Phytanoyl-CoA dioxygenase (PhyH) D3868_18745 PF00113 Enolase, C-terminal TIM barrel domain D3868_18745 PF03952 Enolase, N-terminal domain D3868_18770 PF01728 FtsJ-like methyltransferase D3868_18775 PF00571 CBS domain D3868_18775 PF00478 IMP dehydrogenase / GMP reductase domain D3868_18780 PF00588 SpoU rRNA Methylase family D3868_18780 PF02527 rRNA small subunit methyltransferase G D3868_18790 PF06906 Protein of unknown function (DUF1272) D3868_18800 PF03562 MltA specific insert domain D3868_18800 PF06725 3D domain D3868_18805 PF01029 NusB family D3868_18805 PF01189 16S rRNA methyltransferase RsmB/F D3868_18825 PF00583 Acetyltransferase (GNAT) family D3868_18830 PF02540 NAD synthase D3868_18830 PF00958 GMP synthase C terminal domain D3868_18830 PF00117 Glutamine amidotransferase class-I D3868_18845 PF00872 Transposase, Mutator family D3868_18855 PF03466 LysR substrate binding domain D3868_18855 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family D3868_18870 PF02887 Pyruvate kinase, alpha/beta domain D3868_18870 PF00224 Pyruvate kinase, barrel domain D3868_18875 PF00248 Aldo/keto reductase family D3868_18880 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family D3868_18880 PF03466 LysR substrate binding domain D3868_18885 PF00149 Calcineurin-like phosphoesterase D3868_18935 PF00156 Phosphoribosyl transferase domain D3868_18940 PF02405 Permease MlaE D3868_18945 PF00005 ABC transporter D3868_18965 PF04542 Sigma-70 region 2 D3868_18965 PF04545 Sigma-70, region 4 D3868_18965 PF00140 Sigma-70 factor, region 1.2 D3868_18970 PF01654 Cytochrome bd terminal oxidase subunit I D3868_18975 PF02322 Cytochrome bd terminal oxidase subunit II D3868_18995 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III D3868_18995 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal D3868_19015 PF12804 MobA-like NTP transferase domain D3868_19015 PF00132 Bacterial transferase hexapeptide (six repeats) D3868_19030 PF08666 SAF domain D3868_19030 PF03102 NeuB family D3868_19035 PF02348 Cytidylyltransferase D3868_19045 PF00364 Biotin-requiring enzyme D3868_19045 PF00561 alpha/beta hydrolase fold D3868_19065 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal D3868_19065 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III D3868_19115 PF04972 BON domain D3868_19120 PF01520 N-acetylmuramoyl-L-alanine amidase D3868_19145 PF00551 Formyl transferase D3868_19150 PF00072 Response regulator receiver domain D3868_19170 PF13193 AMP-binding enzyme C-terminal domain D3868_19170 PF00501 AMP-binding enzyme D3868_19180 PF00398 Ribosomal RNA adenine dimethylase D3868_19190 PF01979 Amidohydrolase family D3868_19205 PF17391 Urocanase N-terminal domain D3868_19205 PF17392 Urocanase C-terminal domain D3868_19205 PF01175 Urocanase Rossmann-like domain D3868_19210 PF00892 EamA-like transporter family D3868_19220 PF08241 Methyltransferase domain D3868_19235 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle D3868_19240 PF00528 Binding-protein-dependent transport system inner membrane component D3868_19245 PF12911 N-terminal TM domain of oligopeptide transport permease C D3868_19245 PF00528 Binding-protein-dependent transport system inner membrane component D3868_19250 PF08352 Oligopeptide/dipeptide transporter, C-terminal region D3868_19250 PF00005 ABC transporter D3868_19255 PF08352 Oligopeptide/dipeptide transporter, C-terminal region D3868_19255 PF00005 ABC transporter D3868_19290 PF04461 Protein of unknown function (DUF520) D3868_19305 PF00158 Sigma-54 interaction domain D3868_19305 PF02954 Bacterial regulatory protein, Fis family D3868_19305 PF00072 Response regulator receiver domain D3868_19310 PF04542 Sigma-70 region 2 D3868_19310 PF04545 Sigma-70, region 4 D3868_19310 PF00140 Sigma-70 factor, region 1.2 D3868_19315 PF08448 PAS fold D3868_19315 PF08447 PAS fold D3868_19315 PF00990 Diguanylate cyclase, GGDEF domain D3868_19315 PF00563 EAL domain D3868_19320 PF03471 Transporter associated domain D3868_19320 PF00999 Sodium/hydrogen exchanger family D3868_19320 PF02080 TrkA-C domain D3868_19345 PF01734 Patatin-like phospholipase D3868_19350 PF00664 ABC transporter transmembrane region D3868_19350 PF00005 ABC transporter D3868_19355 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase D3868_19355 PF00512 His Kinase A (phospho-acceptor) domain D3868_19355 PF00989 PAS fold D3868_19380 PF04378 Ribosomal RNA large subunit methyltransferase D, RlmJ D3868_19395 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family D3868_19395 PF03466 LysR substrate binding domain D3868_19400 PF03358 NADPH-dependent FMN reductase D3868_19405 PF13409 Glutathione S-transferase, N-terminal domain D3868_19415 PF00072 Response regulator receiver domain D3868_19415 PF00196 Bacterial regulatory proteins, luxR family D3868_19425 PF07992 Pyridine nucleotide-disulphide oxidoreductase D3868_19455 PF01435 Peptidase family M48 D3868_19465 PF01292 Prokaryotic cytochrome b561 D3868_19470 PF00657 GDSL-like Lipase/Acylhydrolase D3868_19485 PF00430 ATP synthase B/B' CF(0) D3868_19485 PF11154 Protein of unknown function (DUF2934) D3868_19495 PF00004 ATPase family associated with various cellular activities (AAA) D3868_19495 PF05362 Lon protease (S16) C-terminal proteolytic domain D3868_19495 PF02190 ATP-dependent protease La (LON) substrate-binding domain D3868_19505 PF12802 MarR family D3868_19515 PF13426 PAS domain D3868_19515 PF13581 Histidine kinase-like ATPase domain D3868_19515 PF07568 Histidine kinase D3868_19530 PF01192 RNA polymerase Rpb6 D3868_19535 PF02824 TGS domain D3868_19535 PF04607 Region found in RelA / SpoT proteins D3868_19535 PF13291 ACT domain D3868_19545 PF03740 Pyridoxal phosphate biosynthesis protein PdxJ D3868_19550 PF01648 4'-phosphopantetheinyl transferase superfamily D3868_19555 PF10502 Signal peptidase, peptidase S26 D3868_19560 PF00035 Double-stranded RNA binding motif D3868_19560 PF14622 Ribonuclease-III-like D3868_19565 PF01926 50S ribosome-binding GTPase D3868_19565 PF07650 KH domain D3868_19575 PF05128 Domain of unknown function (DUF697) D3868_19595 PF00574 Clp protease D3868_19600 PF00535 Glycosyl transferase family 2 D3868_19605 PF00149 Calcineurin-like phosphoesterase D3868_19610 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion D3868_19615 PF00873 AcrB/AcrD/AcrF family D3868_19625 PF14403 Circularly permuted ATP-grasp type 2 D3868_19625 PF04168 A predicted alpha-helical domain with a conserved ER motif. D3868_19650 PF01263 Aldose 1-epimerase D3868_19655 PF00069 Protein kinase domain D3868_19655 PF03793 PASTA domain D3868_19660 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD D3868_19690 PF04453 LPS transport system D D3868_19700 PF00270 DEAD/DEAH box helicase D3868_19700 PF00271 Helicase conserved C-terminal domain D3868_19710 PF12697 Alpha/beta hydrolase family D3868_19720 PF00986 DNA gyrase B subunit, carboxyl terminus D3868_19720 PF00204 DNA gyrase B D3868_19720 PF01751 Toprim domain D3868_19720 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase D3868_19725 PF03061 Thioesterase superfamily D3868_19730 PF04977 Septum formation initiator D3868_19735 PF00676 Dehydrogenase E1 component D3868_19740 PF00364 Biotin-requiring enzyme D3868_19740 PF02779 Transketolase, pyrimidine binding domain D3868_19740 PF02780 Transketolase, C-terminal domain D3868_19745 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) D3868_19745 PF00364 Biotin-requiring enzyme D3868_19745 PF02817 e3 binding domain D3868_19750 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain D3868_19750 PF07992 Pyridine nucleotide-disulphide oxidoreductase D3868_19755 PF04055 Radical SAM superfamily D3868_19755 PF16881 N-terminal domain of lipoyl synthase of Radical_SAM family D3868_19760 PF03364 Polyketide cyclase / dehydrase and lipid transport D3868_19765 PF18146 Damage-inducible protein CinA KH domain D3868_19765 PF00994 Probable molybdopterin binding domain D3868_19765 PF02464 Competence-damaged protein D3868_19770 PF01128 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase D3868_19770 PF02542 YgbB family D3868_19775 PF01578 Cytochrome C assembly protein D3868_19780 PF01207 Dihydrouridine synthase (Dus) D3868_19785 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase D3868_19785 PF00512 His Kinase A (phospho-acceptor) domain D3868_19785 PF00989 PAS fold D3868_19790 PF00072 Response regulator receiver domain D3868_19790 PF00158 Sigma-54 interaction domain D3868_19790 PF02954 Bacterial regulatory protein, Fis family D3868_19795 PF00672 HAMP domain D3868_19795 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase D3868_19800 PF00072 Response regulator receiver domain D3868_19800 PF00158 Sigma-54 interaction domain D3868_19800 PF02954 Bacterial regulatory protein, Fis family D3868_19810 PF02254 TrkA-N domain D3868_19810 PF02080 TrkA-C domain D3868_19815 PF01063 Amino-transferase class IV D3868_19825 PF17209 Hfq protein D3868_19830 PF16360 GTP-binding GTPase Middle Region D3868_19830 PF13167 GTP-binding GTPase N-terminal D3868_19830 PF01926 50S ribosome-binding GTPase D3868_19845 PF00459 Inositol monophosphatase family D3868_19860 PF03819 MazG nucleotide pyrophosphohydrolase domain D3868_19865 PF01058 NADH ubiquinone oxidoreductase, 20 Kd subunit D3868_19870 PF00346 Respiratory-chain NADH dehydrogenase, 49 Kd subunit D3868_19875 PF00361 Proton-conducting membrane transporter D3868_19885 PF00146 NADH dehydrogenase D3868_19890 PF00361 Proton-conducting membrane transporter D3868_19900 PF16921 Tex protein YqgF-like domain D3868_19900 PF17674 HHH domain D3868_19900 PF09371 Tex-like protein N-terminal domain D3868_19900 PF00575 S1 RNA binding domain D3868_19905 PF00990 Diguanylate cyclase, GGDEF domain D3868_19905 PF03707 Bacterial signalling protein N terminal repeat D3868_19905 PF00563 EAL domain D3868_19910 PF01810 LysE type translocator D3868_19940 PF01906 Putative heavy-metal-binding D3868_19945 PF00561 alpha/beta hydrolase fold D3868_19955 PF00072 Response regulator receiver domain D3868_19960 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle D3868_19965 PF02798 Glutathione S-transferase, N-terminal domain D3868_19965 PF00043 Glutathione S-transferase, C-terminal domain D3868_19970 PF03480 Bacterial extracellular solute-binding protein, family 7 D3868_19975 PF00128 Alpha amylase, catalytic domain D3868_19995 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain D3868_19995 PF00672 HAMP domain D3868_19995 PF17200 Single Cache domain 2 D3868_20010 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion D3868_20015 PF00873 AcrB/AcrD/AcrF family D3868_20030 PF00873 AcrB/AcrD/AcrF family D3868_20035 PF13533 Biotin-lipoyl like D3868_20040 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family D3868_20040 PF03466 LysR substrate binding domain D3868_20045 PF07286 Protein of unknown function (DUF1445) D3868_20060 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component D3868_20065 PF02682 Carboxyltransferase domain, subdomain C and D D3868_20070 PF02626 Carboxyltransferase domain, subdomain A and B D3868_20075 PF03746 LamB/YcsF family D3868_20080 PF02954 Bacterial regulatory protein, Fis family D3868_20080 PF00072 Response regulator receiver domain D3868_20080 PF00158 Sigma-54 interaction domain D3868_20090 PF00009 Elongation factor Tu GTP binding domain D3868_20090 PF16658 Class II release factor RF3, C-terminal domain D3868_20100 PF01118 Semialdehyde dehydrogenase, NAD binding domain D3868_20100 PF02774 Semialdehyde dehydrogenase, dimerisation domain D3868_20105 PF00343 Carbohydrate phosphorylase D3868_20130 PF04542 Sigma-70 region 2 D3868_20130 PF08281 Sigma-70, region 4 D3868_20155 PF00999 Sodium/hydrogen exchanger family D3868_20160 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase D3868_20165 PF00486 Transcriptional regulatory protein, C terminal D3868_20165 PF00072 Response regulator receiver domain D3868_20195 PF02082 Transcriptional regulator D3868_20200 PF01458 Uncharacterized protein family (UPF0051) D3868_20205 PF00005 ABC transporter D3868_20210 PF01458 Uncharacterized protein family (UPF0051) D3868_20215 PF00266 Aminotransferase class-V D3868_20220 PF01592 NifU-like N terminal domain D3868_20230 PF01521 Iron-sulphur cluster biosynthesis D3868_20240 PF01433 Peptidase family M1 domain D3868_20240 PF11940 Domain of unknown function (DUF3458) Ig-like fold D3868_20240 PF17432 Domain of unknown function (DUF3458_C) ARM repeats D3868_20245 PF00034 Cytochrome c D3868_20260 PF01288 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK) D3868_20295 PF11154 Protein of unknown function (DUF2934) D3868_20295 PF00430 ATP synthase B/B' CF(0) D3868_20300 PF00892 EamA-like transporter family D3868_20305 PF01627 Hpt domain D3868_20305 PF00672 HAMP domain D3868_20305 PF17149 Periplasmic sensor domain found in signal transduction proteins D3868_20305 PF00072 Response regulator receiver domain D3868_20305 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase D3868_20305 PF00512 His Kinase A (phospho-acceptor) domain D3868_20310 PF07690 Major Facilitator Superfamily D3868_20315 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family D3868_20315 PF03466 LysR substrate binding domain D3868_20325 PF10589 NADH-ubiquinone oxidoreductase-F iron-sulfur binding region D3868_20325 PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit D3868_20325 PF00037 4Fe-4S binding domain D3868_20330 PF12838 4Fe-4S dicluster domain D3868_20330 PF04879 Molybdopterin oxidoreductase Fe4S4 domain D3868_20330 PF00384 Molybdopterin oxidoreductase D3868_20330 PF01568 Molydopterin dinucleotide binding domain D3868_20330 PF10588 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region D3868_20335 PF02634 FdhD/NarQ family D3868_20350 PF04055 Radical SAM superfamily D3868_20350 PF18693 TRAM domain D3868_20350 PF00919 Uncharacterized protein family UPF0004 D3868_20355 PF01588 Putative tRNA binding domain D3868_20375 PF13167 GTP-binding GTPase N-terminal D3868_20375 PF16360 GTP-binding GTPase Middle Region D3868_20375 PF01926 50S ribosome-binding GTPase D3868_20385 PF00920 Dehydratase family D3868_20420 PF01467 Cytidylyltransferase-like D3868_20425 PF00521 DNA gyrase/topoisomerase IV, subunit A D3868_20425 PF03989 DNA gyrase C-terminal domain, beta-propeller D3868_20430 PF01554 MatE D3868_20465 PF00436 Single-strand binding protein family D3868_20470 PF17755 UvrA DNA-binding domain D3868_20470 PF17760 UvrA interaction domain D3868_20490 PF01134 Glucose inhibited division protein A D3868_20515 PF01593 Flavin containing amine oxidoreductase D3868_20520 PF02777 Iron/manganese superoxide dismutases, C-terminal domain D3868_20520 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain D3868_20525 PF04430 Protein of unknown function (DUF498/DUF598) D3868_20535 PF02699 Preprotein translocase subunit D3868_20550 PF01551 Peptidase family M23 D3868_20550 PF01476 LysM domain D3868_20560 PF01975 Survival protein SurE D3868_20565 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) D3868_20565 PF02403 Seryl-tRNA synthetase N-terminal domain D3868_20570 PF00990 Diguanylate cyclase, GGDEF domain D3868_20570 PF00072 Response regulator receiver domain D3868_20575 PF00902 Sec-independent protein translocase protein (TatC) D3868_20580 PF02416 mttA/Hcf106 family D3868_20585 PF02416 mttA/Hcf106 family D3868_20590 PF00005 ABC transporter D3868_20590 PF08402 TOBE domain D3868_20595 PF04079 Segregation and condensation complex subunit ScpB D3868_20600 PF02616 Segregation and condensation protein ScpA D3868_20605 PF02163 Peptidase family M50 D3868_20610 PF00933 Glycosyl hydrolase family 3 N terminal domain D3868_20620 PF05746 DALR anticodon binding domain D3868_20620 PF03485 Arginyl tRNA synthetase N terminal domain D3868_20620 PF00750 tRNA synthetases class I (R) D3868_20625 PF01966 HD domain D3868_20625 PF13286 Phosphohydrolase-associated domain D3868_20630 PF01521 Iron-sulphur cluster biosynthesis D3868_20635 PF03372 Endonuclease/Exonuclease/phosphatase family D3868_20650 PF00990 Diguanylate cyclase, GGDEF domain D3868_20650 PF00072 Response regulator receiver domain D3868_20655 PF00694 Aconitase C-terminal domain D3868_20660 PF00330 Aconitase family (aconitate hydratase) D3868_20670 PF00857 Isochorismatase family D3868_20675 PF05378 Hydantoinase/oxoprolinase N-terminal region D3868_20675 PF01968 Hydantoinase/oxoprolinase D3868_20680 PF02538 Hydantoinase B/oxoprolinase D3868_20690 PF00005 ABC transporter D3868_20695 PF00005 ABC transporter D3868_20695 PF12399 Branched-chain amino acid ATP-binding cassette transporter D3868_20700 PF02653 Branched-chain amino acid transport system / permease component D3868_20700 PF11862 Domain of unknown function (DUF3382) D3868_20705 PF02653 Branched-chain amino acid transport system / permease component D3868_20710 PF13458 Periplasmic binding protein D3868_20715 PF00392 Bacterial regulatory proteins, gntR family D3868_20715 PF07702 UTRA domain D3868_20720 PF00692 dUTPase D3868_20735 PF01925 Sulfite exporter TauE/SafE D3868_20740 PF00106 short chain dehydrogenase D3868_20760 PF03454 MoeA C-terminal region (domain IV) D3868_20760 PF00994 Probable molybdopterin binding domain D3868_20760 PF03453 MoeA N-terminal region (domain I and II) D3868_20765 PF00528 Binding-protein-dependent transport system inner membrane component D3868_20770 PF00528 Binding-protein-dependent transport system inner membrane component D3868_20780 PF00005 ABC transporter D3868_20785 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain D3868_20785 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain D3868_20790 PF00356 Bacterial regulatory proteins, lacI family D3868_20790 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family D3868_20795 PF01557 Fumarylacetoacetate (FAA) hydrolase family D3868_20800 PF00920 Dehydratase family D3868_20810 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family D3868_20810 PF00356 Bacterial regulatory proteins, lacI family D3868_20815 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase D3868_20815 PF00393 6-phosphogluconate dehydrogenase, C-terminal domain D3868_20820 PF00378 Enoyl-CoA hydratase/isomerase D3868_20835 PF04972 BON domain D3868_20835 PF01476 LysM domain D3868_20845 PF00528 Binding-protein-dependent transport system inner membrane component D3868_20850 PF00005 ABC transporter D3868_20855 PF00528 Binding-protein-dependent transport system inner membrane component D3868_20860 PF04069 Substrate binding domain of ABC-type glycine betaine transport system D3868_20865 PF00762 Ferrochelatase D3868_20875 PF08402 TOBE domain D3868_20875 PF00005 ABC transporter D3868_20885 PF00528 Binding-protein-dependent transport system inner membrane component D3868_20890 PF00528 Binding-protein-dependent transport system inner membrane component D3868_20895 PF01177 Asp/Glu/Hydantoin racemase D3868_20925 PF00072 Response regulator receiver domain D3868_20925 PF00486 Transcriptional regulatory protein, C terminal D3868_20930 PF00512 His Kinase A (phospho-acceptor) domain D3868_20930 PF01627 Hpt domain D3868_20930 PF00989 PAS fold D3868_20930 PF00072 Response regulator receiver domain D3868_20930 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase D3868_20930 PF00497 Bacterial extracellular solute-binding proteins, family 3 D3868_20965 PF07690 Major Facilitator Superfamily D3868_20985 PF02481 DNA recombination-mediator protein A D3868_20985 PF17782 DprA winged helix domain D3868_20990 PF01396 Topoisomerase DNA binding C4 zinc finger D3868_20990 PF13368 Topoisomerase C-terminal repeat D3868_20990 PF01751 Toprim domain D3868_20990 PF01131 DNA topoisomerase D3868_21005 PF01557 Fumarylacetoacetate (FAA) hydrolase family D3868_21015 PF03480 Bacterial extracellular solute-binding protein, family 7 D3868_21020 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component D3868_21025 PF04290 Tripartite ATP-independent periplasmic transporters, DctQ component D3868_21030 PF02685 Glucokinase D3868_21030 PF01380 SIS domain D3868_21030 PF01418 Helix-turn-helix domain, rpiR family D3868_21035 PF01207 Dihydrouridine synthase (Dus) D3868_21045 PF00255 Glutathione peroxidase D3868_21050 PF07690 Major Facilitator Superfamily D3868_21060 PF12794 Mechanosensitive ion channel inner membrane domain 1 D3868_21060 PF00924 Mechanosensitive ion channel D3868_21060 PF12795 Mechanosensitive ion channel porin domain D3868_21100 PF07859 alpha/beta hydrolase fold D3868_21110 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain D3868_21110 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain D3868_21115 PF02615 Malate/L-lactate dehydrogenase D3868_21120 PF00291 Pyridoxal-phosphate dependent enzyme D3868_21125 PF00528 Binding-protein-dependent transport system inner membrane component D3868_21130 PF00005 ABC transporter D3868_21145 PF00037 4Fe-4S binding domain D3868_21145 PF13247 4Fe-4S dicluster domain D3868_21180 PF02790 Cytochrome C oxidase subunit II, transmembrane domain D3868_21180 PF00116 Cytochrome C oxidase subunit II, periplasmic domain D3868_21185 PF00115 Cytochrome C and Quinol oxidase polypeptide I D3868_21190 PF00510 Cytochrome c oxidase subunit III D3868_21215 PF04542 Sigma-70 region 2 D3868_21215 PF08281 Sigma-70, region 4 D3868_21230 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle D3868_21235 PF00528 Binding-protein-dependent transport system inner membrane component D3868_21245 PF00005 ABC transporter D3868_21245 PF08352 Oligopeptide/dipeptide transporter, C-terminal region D3868_21250 PF00005 ABC transporter D3868_21250 PF08352 Oligopeptide/dipeptide transporter, C-terminal region D3868_21255 PF00106 short chain dehydrogenase D3868_21260 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family D3868_21260 PF03466 LysR substrate binding domain D3868_21265 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family D3868_21265 PF03466 LysR substrate binding domain D3868_21270 PF01266 FAD dependent oxidoreductase D3868_21270 PF16901 C-terminal domain of alpha-glycerophosphate oxidase D3868_21275 PF00724 NADH:flavin oxidoreductase / NADH oxidase family D3868_21290 PF09370 Phosphoenolpyruvate hydrolase-like D3868_21290 PF02954 Bacterial regulatory protein, Fis family D3868_21290 PF00158 Sigma-54 interaction domain D3868_21300 PF09370 Phosphoenolpyruvate hydrolase-like D3868_21330 PF03461 TRCF domain D3868_21330 PF02559 CarD-like/TRCF domain D3868_21330 PF17757 UvrB interaction domain D3868_21330 PF00270 DEAD/DEAH box helicase D3868_21330 PF00271 Helicase conserved C-terminal domain D3868_21355 PF17876 Cold shock domain D3868_21355 PF08206 Ribonuclease B OB domain D3868_21355 PF08461 Ribonuclease R winged-helix domain D3868_21355 PF00773 RNB domain D3868_21355 PF00575 S1 RNA binding domain D3868_21360 PF13180 PDZ domain D3868_21360 PF03572 Peptidase family S41 D3868_21365 PF00471 Ribosomal protein L33 D3868_21370 PF00072 Response regulator receiver domain D3868_21370 PF00990 Diguanylate cyclase, GGDEF domain D3868_21375 PF00072 Response regulator receiver domain D3868_21380 PF00989 PAS fold D3868_21380 PF00512 His Kinase A (phospho-acceptor) domain D3868_21380 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase D3868_21385 PF00563 EAL domain D3868_21385 PF13426 PAS domain D3868_21385 PF08448 PAS fold D3868_21385 PF00990 Diguanylate cyclase, GGDEF domain D3868_21385 PF08447 PAS fold D3868_21385 PF05231 MASE1 D3868_21390 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain D3868_21390 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain D3868_21405 PF01336 OB-fold nucleic acid binding domain D3868_21405 PF02938 GAD domain D3868_21405 PF00152 tRNA synthetases class II (D, K and N) D3868_21410 PF01612 3'-5' exonuclease D3868_21410 PF00570 HRDC domain D3868_21420 PF02541 Ppx/GppA phosphatase family D3868_21425 PF02503 Polyphosphate kinase middle domain D3868_21425 PF13090 Polyphosphate kinase C-terminal domain 2 D3868_21425 PF17941 Polyphosphate kinase C-terminal domain 1 D3868_21425 PF13089 Polyphosphate kinase N-terminal domain D3868_21435 PF01928 CYTH domain D3868_21440 PF00106 short chain dehydrogenase D3868_21450 PF01594 AI-2E family transporter D3868_21455 PF01066 CDP-alcohol phosphatidyltransferase D3868_21465 PF00586 AIR synthase related protein, N-terminal domain D3868_21465 PF02769 AIR synthase related protein, C-terminal domain D3868_21470 PF00551 Formyl transferase D3868_21485 PF00334 Nucleoside diphosphate kinase D3868_21490 PF00005 ABC transporter D3868_21490 PF12848 ABC transporter D3868_21495 PF06055 Exopolysaccharide synthesis, ExoD D3868_21500 PF00398 Ribosomal RNA adenine dimethylase D3868_21505 PF00106 short chain dehydrogenase D3868_21510 PF03755 YicC-like family, N-terminal region D3868_21510 PF08340 Domain of unknown function (DUF1732) D3868_21515 PF00625 Guanylate kinase D3868_21520 PF00398 Ribosomal RNA adenine dimethylase D3868_21535 PF01464 Transglycosylase SLT domain D3868_21545 PF00989 PAS fold D3868_21545 PF00512 His Kinase A (phospho-acceptor) domain D3868_21545 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase D3868_21550 PF04166 Pyridoxal phosphate biosynthetic protein PdxA D3868_21555 PF00639 PPIC-type PPIASE domain D3868_21555 PF09312 SurA N-terminal domain D3868_21565 PF02789 Cytosol aminopeptidase family, N-terminal domain D3868_21565 PF00883 Cytosol aminopeptidase family, catalytic domain D3868_21570 PF04364 DNA polymerase III chi subunit, HolC D3868_21575 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase D3868_21575 PF00512 His Kinase A (phospho-acceptor) domain D3868_21580 PF07690 Major Facilitator Superfamily D3868_21595 PF00271 Helicase conserved C-terminal domain D3868_21595 PF04851 Type III restriction enzyme, res subunit D3868_21595 PF17757 UvrB interaction domain D3868_21595 PF12344 Ultra-violet resistance protein B D3868_21595 PF02151 UvrB/uvrC motif D3868_21610 PF01063 Amino-transferase class IV D3868_21615 PF12802 MarR family D3868_21620 PF00313 'Cold-shock' DNA-binding domain D3868_21625 PF17149 Periplasmic sensor domain found in signal transduction proteins D3868_21625 PF00672 HAMP domain D3868_21625 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase D3868_21625 PF00512 His Kinase A (phospho-acceptor) domain D3868_21625 PF01627 Hpt domain D3868_21625 PF00072 Response regulator receiver domain D3868_21630 PF00072 Response regulator receiver domain D3868_21630 PF00486 Transcriptional regulatory protein, C terminal D3868_21635 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase D3868_21635 PF00672 HAMP domain D3868_21635 PF00512 His Kinase A (phospho-acceptor) domain D3868_21645 PF01266 FAD dependent oxidoreductase D3868_21655 PF13193 AMP-binding enzyme C-terminal domain D3868_21655 PF00501 AMP-binding enzyme D3868_21665 PF00005 ABC transporter D3868_21670 PF12399 Branched-chain amino acid ATP-binding cassette transporter D3868_21670 PF00005 ABC transporter D3868_21675 PF02653 Branched-chain amino acid transport system / permease component D3868_21680 PF13458 Periplasmic binding protein D3868_21690 PF01575 MaoC like domain D3868_21705 PF02803 Thiolase, C-terminal domain D3868_21705 PF00108 Thiolase, N-terminal domain D3868_21715 PF01261 Xylose isomerase-like TIM barrel D3868_21720 PF00392 Bacterial regulatory proteins, gntR family D3868_21720 PF07729 FCD domain D3868_21735 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component D3868_21750 PF16881 N-terminal domain of lipoyl synthase of Radical_SAM family D3868_21750 PF04055 Radical SAM superfamily D3868_21760 PF00561 alpha/beta hydrolase fold D3868_21760 PF00364 Biotin-requiring enzyme D3868_21765 PF02780 Transketolase, C-terminal domain D3868_21765 PF02779 Transketolase, pyrimidine binding domain D3868_21770 PF00676 Dehydrogenase E1 component D3868_21775 PF01513 ATP-NAD kinase D3868_21780 PF00158 Sigma-54 interaction domain D3868_21780 PF02954 Bacterial regulatory protein, Fis family D3868_21780 PF01590 GAF domain D3868_21785 PF01205 Uncharacterized protein family UPF0029 D3868_21795 PF08671 Anti-repressor SinI D3868_21795 PF01381 Helix-turn-helix D3868_21800 PF00561 alpha/beta hydrolase fold D3868_21825 PF00561 alpha/beta hydrolase fold D3868_21830 PF00106 short chain dehydrogenase D3868_21845 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family D3868_21845 PF03466 LysR substrate binding domain D3868_21855 PF05199 GMC oxidoreductase D3868_21855 PF00732 GMC oxidoreductase D3868_21865 PF01047 MarR family D3868_21880 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family D3868_21880 PF03466 LysR substrate binding domain D3868_21895 PF01728 FtsJ-like methyltransferase D3868_21895 PF01479 S4 domain D3868_21905 PF13292 1-deoxy-D-xylulose-5-phosphate synthase D3868_21905 PF02780 Transketolase, C-terminal domain D3868_21905 PF02779 Transketolase, pyrimidine binding domain D3868_21910 PF00348 Polyprenyl synthetase D3868_21915 PF02609 Exonuclease VII small subunit D3868_21920 PF00850 Histone deacetylase domain D3868_21925 PF01206 Sulfurtransferase TusA D3868_21935 PF01022 Bacterial regulatory protein, arsR family D3868_21945 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) D3868_21945 PF00072 Response regulator receiver domain D3868_21945 PF00672 HAMP domain D3868_21945 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase D3868_21945 PF00512 His Kinase A (phospho-acceptor) domain D3868_21945 PF01627 Hpt domain D3868_21955 PF02167 Cytochrome C1 family D3868_21955 PF00033 Cytochrome b/b6/petB D3868_21955 PF00032 Cytochrome b(C-terminal)/b6/petD D3868_21960 PF00033 Cytochrome b/b6/petB D3868_21960 PF00032 Cytochrome b(C-terminal)/b6/petD D3868_21965 PF00355 Rieske [2Fe-2S] domain D3868_21965 PF10399 Ubiquitinol-cytochrome C reductase Fe-S subunit TAT signal D3868_21970 PF00588 SpoU rRNA Methylase family D3868_21975 PF01218 Coproporphyrinogen III oxidase D3868_21980 PF13735 tRNA nucleotidyltransferase domain 2 putative D3868_21980 PF12627 Probable RNA and SrmB- binding site of polymerase A D3868_21980 PF01743 Poly A polymerase head domain D3868_21990 PF00293 NUDIX domain D3868_22000 PF07726 ATPase family associated with various cellular activities (AAA) D3868_22000 PF17863 AAA lid domain D3868_22050 PF02796 Helix-turn-helix domain of resolvase D3868_22050 PF00239 Resolvase, N terminal domain D3868_22105 PF00441 Acyl-CoA dehydrogenase, C-terminal domain D3868_22105 PF02770 Acyl-CoA dehydrogenase, middle domain D3868_22105 PF02771 Acyl-CoA dehydrogenase, N-terminal domain D3868_22110 PF00550 Phosphopantetheine attachment site D3868_22115 PF02566 OsmC-like protein D3868_22140 PF00378 Enoyl-CoA hydratase/isomerase D3868_22145 PF08402 TOBE domain D3868_22145 PF00005 ABC transporter D3868_22150 PF00528 Binding-protein-dependent transport system inner membrane component D3868_22180 PF02515 CoA-transferase family III D3868_22185 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family D3868_22185 PF03466 LysR substrate binding domain D3868_22215 PF03167 Uracil DNA glycosylase superfamily D3868_22235 PF13360 PQQ-like domain D3868_22240 PF13442 Cytochrome C oxidase, cbb3-type, subunit III D3868_22280 PF04476 4-HFC-P synthase D3868_22300 PF00005 ABC transporter D3868_22320 PF02741 FTR, proximal lobe D3868_22320 PF01913 Formylmethanofuran-tetrahydromethanopterin formyltransferase D3868_22325 PF07969 Amidohydrolase family D3868_22335 PF01329 Pterin 4 alpha carbinolamine dehydratase D3868_22345 PF09176 Methylene-tetrahydromethanopterin dehydrogenase, N-terminal D3868_22350 PF02787 Carbamoyl-phosphate synthetase large chain, oligomerisation domain D3868_22350 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain D3868_22350 PF02142 MGS-like domain D3868_22355 PF02289 Cyclohydrolase (MCH) D3868_22360 PF18030 RimK PreATP-grasp domain D3868_22360 PF08443 RimK-like ATP-grasp domain D3868_22370 PF08714 Formaldehyde-activating enzyme (Fae) D3868_22465 PF01614 Bacterial transcriptional regulator D3868_22465 PF09339 IclR helix-turn-helix domain D3868_22470 PF00378 Enoyl-CoA hydratase/isomerase D3868_22480 PF08402 TOBE domain D3868_22480 PF00005 ABC transporter D3868_22485 PF00528 Binding-protein-dependent transport system inner membrane component D3868_22490 PF00501 AMP-binding enzyme D3868_22490 PF13193 AMP-binding enzyme C-terminal domain D3868_22495 PF00672 HAMP domain D3868_22495 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain D3868_22505 PF01425 Amidase D3868_22510 PF01979 Amidohydrolase family D3868_22520 PF01979 Amidohydrolase family D3868_22525 PF00005 ABC transporter D3868_22530 PF00528 Binding-protein-dependent transport system inner membrane component D3868_22540 PF07729 FCD domain D3868_22540 PF00392 Bacterial regulatory proteins, gntR family D3868_22550 PF00005 ABC transporter D3868_22550 PF08402 TOBE domain D3868_22555 PF13416 Bacterial extracellular solute-binding protein D3868_22560 PF00528 Binding-protein-dependent transport system inner membrane component D3868_22565 PF00528 Binding-protein-dependent transport system inner membrane component D3868_22570 PF00576 HIUase/Transthyretin family D3868_22580 PF01425 Amidase D3868_22585 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase D3868_22585 PF00072 Response regulator receiver domain D3868_22585 PF00512 His Kinase A (phospho-acceptor) domain D3868_22585 PF09308 LuxQ, periplasmic D3868_22595 PF01209 ubiE/COQ5 methyltransferase family D3868_22610 PF17770 Ribonuclease J C-terminal domain D3868_22610 PF07521 Zn-dependent metallo-hydrolase RNA specificity domain D3868_22610 PF12706 Beta-lactamase superfamily domain D3868_22620 PF00723 Glycosyl hydrolases family 15 D3868_22635 PF00196 Bacterial regulatory proteins, luxR family D3868_22635 PF00072 Response regulator receiver domain D3868_22640 PF00072 Response regulator receiver domain D3868_22640 PF00196 Bacterial regulatory proteins, luxR family D3868_22645 PF00196 Bacterial regulatory proteins, luxR family D3868_22645 PF00072 Response regulator receiver domain D3868_22655 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain D3868_22655 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain D3868_22655 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain D3868_22660 PF16363 GDP-mannose 4,6 dehydratase D3868_22665 PF16363 GDP-mannose 4,6 dehydratase D3868_22670 PF00534 Glycosyl transferases group 1 D3868_22675 PF03808 Glycosyl transferase WecB/TagA/CpsF family D3868_22685 PF02397 Bacterial sugar transferase D3868_22690 PF01370 NAD dependent epimerase/dehydratase family D3868_22695 PF13614 AAA domain D3868_22695 PF13807 G-rich domain on putative tyrosine kinase D3868_22695 PF02706 Chain length determinant protein D3868_22700 PF02894 Oxidoreductase family, C-terminal alpha/beta domain D3868_22700 PF01408 Oxidoreductase family, NAD-binding Rossmann fold D3868_22710 PF00534 Glycosyl transferases group 1 D3868_22710 PF13579 Glycosyl transferase 4-like domain D3868_22725 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family D3868_22740 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family D3868_22740 PF03466 LysR substrate binding domain D3868_22745 PF07687 Peptidase dimerisation domain D3868_22745 PF01546 Peptidase family M20/M25/M40 D3868_22750 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle D3868_22755 PF00528 Binding-protein-dependent transport system inner membrane component D3868_22760 PF12911 N-terminal TM domain of oligopeptide transport permease C D3868_22760 PF00528 Binding-protein-dependent transport system inner membrane component D3868_22765 PF08352 Oligopeptide/dipeptide transporter, C-terminal region D3868_22765 PF00005 ABC transporter D3868_22775 PF07687 Peptidase dimerisation domain D3868_22775 PF01546 Peptidase family M20/M25/M40 D3868_22780 PF00850 Histone deacetylase domain D3868_22785 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain D3868_22785 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain D3868_22790 PF05853 beta-keto acid cleavage enzyme D3868_22795 PF00892 EamA-like transporter family D3868_22800 PF00356 Bacterial regulatory proteins, lacI family D3868_22805 PF03480 Bacterial extracellular solute-binding protein, family 7 D3868_22810 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component D3868_22820 PF00016 Ribulose bisphosphate carboxylase large chain, catalytic domain D3868_22820 PF02788 Ribulose bisphosphate carboxylase large chain, N-terminal domain D3868_22825 PF07005 Sugar-binding N-terminal domain D3868_22825 PF17042 Nucleotide-binding C-terminal domain D3868_22830 PF00027 Cyclic nucleotide-binding domain D3868_22830 PF00325 Bacterial regulatory proteins, crp family D3868_22835 PF00158 Sigma-54 interaction domain D3868_22835 PF02954 Bacterial regulatory protein, Fis family D3868_22835 PF00072 Response regulator receiver domain D3868_22845 PF00216 Bacterial DNA-binding protein D3868_22850 PF04542 Sigma-70 region 2 D3868_22850 PF08281 Sigma-70, region 4 D3868_22860 PF01027 Inhibitor of apoptosis-promoting Bax1 D3868_22870 PF07690 Major Facilitator Superfamily D3868_22875 PF06796 Periplasmic nitrate reductase protein NapE D3868_22890 PF01568 Molydopterin dinucleotide binding domain D3868_22890 PF00384 Molybdopterin oxidoreductase D3868_22890 PF04879 Molybdopterin oxidoreductase Fe4S4 domain D3868_22895 PF03892 Nitrate reductase cytochrome c-type subunit (NapB) D3868_22900 PF03264 NapC/NirT cytochrome c family, N-terminal region D3868_22905 PF00216 Bacterial DNA-binding protein D3868_22915 PF00072 Response regulator receiver domain D3868_22920 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase D3868_22920 PF00512 His Kinase A (phospho-acceptor) domain D3868_22930 PF03626 Prokaryotic Cytochrome C oxidase subunit IV D3868_22935 PF00510 Cytochrome c oxidase subunit III D3868_22940 PF00115 Cytochrome C and Quinol oxidase polypeptide I D3868_22945 PF06481 COX Aromatic Rich Motif D3868_22945 PF00116 Cytochrome C oxidase subunit II, periplasmic domain D3868_22950 PF07690 Major Facilitator Superfamily D3868_22950 PF00083 Sugar (and other) transporter D3868_22960 PF01256 Carbohydrate kinase D3868_22965 PF13456 Reverse transcriptase-like D3868_22965 PF00300 Histidine phosphatase superfamily (branch 1) D3868_22975 PF03707 Bacterial signalling protein N terminal repeat D3868_22975 PF00990 Diguanylate cyclase, GGDEF domain D3868_22975 PF00563 EAL domain D3868_22980 PF02028 BCCT, betaine/carnitine/choline family transporter D3868_22990 PF03706 Lysylphosphatidylglycerol synthase TM region D3868_22995 PF02386 Cation transport protein D3868_23045 PF00842 Alanine racemase, C-terminal domain D3868_23045 PF01168 Alanine racemase, N-terminal domain D3868_23065 PF00672 HAMP domain D3868_23065 PF02743 Cache domain D3868_23065 PF00211 Adenylate and Guanylate cyclase catalytic domain D3868_23070 PF03480 Bacterial extracellular solute-binding protein, family 7 D3868_23090 PF01047 MarR family D3868_23095 PF02566 OsmC-like protein D3868_23105 PF00072 Response regulator receiver domain D3868_23110 PF00512 His Kinase A (phospho-acceptor) domain D3868_23110 PF17149 Periplasmic sensor domain found in signal transduction proteins D3868_23110 PF00672 HAMP domain D3868_23110 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase D3868_23110 PF01627 Hpt domain D3868_23110 PF00072 Response regulator receiver domain D3868_23115 PF04069 Substrate binding domain of ABC-type glycine betaine transport system D3868_23120 PF00528 Binding-protein-dependent transport system inner membrane component D3868_23125 PF00005 ABC transporter D3868_23125 PF00571 CBS domain D3868_23130 PF01432 Peptidase family M3 D3868_23135 PF05962 HutD D3868_23160 PF00497 Bacterial extracellular solute-binding proteins, family 3 D3868_23170 PF00005 ABC transporter D3868_23185 PF04879 Molybdopterin oxidoreductase Fe4S4 domain D3868_23185 PF01568 Molydopterin dinucleotide binding domain D3868_23185 PF00384 Molybdopterin oxidoreductase D3868_23190 PF03916 Polysulphide reductase, NrfD D3868_23195 PF13247 4Fe-4S dicluster domain D3868_23205 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family D3868_23205 PF03466 LysR substrate binding domain D3868_23210 PF00248 Aldo/keto reductase family D3868_23215 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain D3868_23215 PF00672 HAMP domain D3868_23220 PF06472 ABC transporter transmembrane region 2 D3868_23220 PF00005 ABC transporter D3868_23230 PF02195 ParB-like nuclease domain D3868_23230 PF17762 HTH domain found in ParB protein D3868_23235 PF13614 AAA domain D3868_23240 PF01435 Peptidase family M48 D3868_23245 PF03358 NADPH-dependent FMN reductase D3868_23245 PF01566 Natural resistance-associated macrophage protein D3868_23260 PF01261 Xylose isomerase-like TIM barrel D3868_23270 PF00535 Glycosyl transferase family 2 D3868_23285 PF04932 O-Antigen ligase D3868_23290 PF13807 G-rich domain on putative tyrosine kinase D3868_23290 PF02706 Chain length determinant protein D3868_23290 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain D3868_23295 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain D3868_23295 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain D3868_23295 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain D3868_23320 PF00535 Glycosyl transferase family 2 D3868_23330 PF01037 Lrp/AsnC ligand binding domain D3868_23335 PF03807 NADP oxidoreductase coenzyme F420-dependent D3868_23335 PF14748 Pyrroline-5-carboxylate reductase dimerisation D3868_23340 PF01619 Proline dehydrogenase D3868_23340 PF18327 Proline utilization A proline dehydrogenase N-terminal domain D3868_23340 PF00171 Aldehyde dehydrogenase family D3868_23340 PF14850 DNA-binding domain of Proline dehydrogenase D3868_23380 PF08281 Sigma-70, region 4 D3868_23380 PF04542 Sigma-70 region 2 D3868_23390 PF01022 Bacterial regulatory protein, arsR family D3868_23395 PF00581 Rhodanese-like domain D3868_23400 PF00873 AcrB/AcrD/AcrF family D3868_23415 PF07992 Pyridine nucleotide-disulphide oxidoreductase D3868_23420 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase D3868_23420 PF00512 His Kinase A (phospho-acceptor) domain D3868_23425 PF00196 Bacterial regulatory proteins, luxR family D3868_23425 PF00072 Response regulator receiver domain D3868_23430 PF00085 Thioredoxin D3868_23445 PF04715 Anthranilate synthase component I, N terminal region D3868_23445 PF00425 chorismate binding enzyme D3868_23450 PF01063 Amino-transferase class IV D3868_23460 PF00571 CBS domain D3868_23460 PF02163 Peptidase family M50 D3868_23470 PF02082 Transcriptional regulator D3868_23480 PF01037 Lrp/AsnC ligand binding domain D3868_23495 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family D3868_23495 PF03466 LysR substrate binding domain D3868_23500 PF00392 Bacterial regulatory proteins, gntR family D3868_23500 PF07729 FCD domain D3868_23505 PF03480 Bacterial extracellular solute-binding protein, family 7 D3868_23510 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component D3868_23510 PF04290 Tripartite ATP-independent periplasmic transporters, DctQ component D3868_23515 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component D3868_23520 PF05661 Protein of unknown function (DUF808) D3868_23540 PF01966 HD domain D3868_23545 PF00005 ABC transporter D3868_23550 PF01061 ABC-2 type transporter D3868_23555 PF04828 Glutathione-dependent formaldehyde-activating enzyme D3868_23560 PF01425 Amidase D3868_23565 PF01425 Amidase D3868_23570 PF00857 Isochorismatase family D3868_23575 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle D3868_23590 PF00005 ABC transporter D3868_23590 PF08352 Oligopeptide/dipeptide transporter, C-terminal region D3868_23595 PF00005 ABC transporter D3868_23595 PF08352 Oligopeptide/dipeptide transporter, C-terminal region D3868_23600 PF00857 Isochorismatase family D3868_23605 PF05145 Transition state regulatory protein AbrB D3868_23610 PF00392 Bacterial regulatory proteins, gntR family D3868_23610 PF07729 FCD domain D3868_23620 PF03814 Potassium-transporting ATPase A subunit D3868_23630 PF02669 K+-transporting ATPase, c chain D3868_23635 PF02702 Osmosensitive K+ channel His kinase sensor domain D3868_23635 PF00512 His Kinase A (phospho-acceptor) domain D3868_23635 PF13493 Domain of unknown function (DUF4118) D3868_23635 PF13492 GAF domain D3868_23635 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase D3868_23640 PF00486 Transcriptional regulatory protein, C terminal D3868_23640 PF00072 Response regulator receiver domain D3868_23645 PF03741 Integral membrane protein TerC family D3868_23650 PF00211 Adenylate and Guanylate cyclase catalytic domain D3868_23655 PF00027 Cyclic nucleotide-binding domain D3868_23655 PF13545 Crp-like helix-turn-helix domain D3868_23660 PF04264 YceI-like domain D3868_23680 PF00072 Response regulator receiver domain D3868_23680 PF00196 Bacterial regulatory proteins, luxR family D3868_23685 PF00196 Bacterial regulatory proteins, luxR family D3868_23685 PF00072 Response regulator receiver domain D3868_23690 PF00989 PAS fold D3868_23690 PF00512 His Kinase A (phospho-acceptor) domain D3868_23690 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase D3868_23700 PF02321 Outer membrane efflux protein D3868_23705 PF00873 AcrB/AcrD/AcrF family D3868_23710 PF00873 AcrB/AcrD/AcrF family D3868_23715 PF13533 Biotin-lipoyl like D3868_23720 PF00155 Aminotransferase class I and II D3868_23725 PF02550 Acetyl-CoA hydrolase/transferase N-terminal domain D3868_23725 PF13336 Acetyl-CoA hydrolase/transferase C-terminal domain D3868_23750 PF01568 Molydopterin dinucleotide binding domain D3868_23750 PF00384 Molybdopterin oxidoreductase D3868_23750 PF04879 Molybdopterin oxidoreductase Fe4S4 domain D3868_23755 PF10672 S-adenosylmethionine-dependent methyltransferase D3868_23755 PF02926 THUMP domain D3868_23755 PF01170 Putative RNA methylase family UPF0020 D3868_23775 PF03976 Polyphosphate kinase 2 (PPK2) D3868_23825 PF11339 Protein of unknown function (DUF3141) D3868_23835 PF01515 Phosphate acetyl/butaryl transferase D3868_23840 PF00871 Acetokinase family D3868_23845 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion D3868_23850 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion D3868_23855 PF00873 AcrB/AcrD/AcrF family D3868_23865 PF01594 AI-2E family transporter D3868_23870 PF01380 SIS domain D3868_23880 PF01757 Acyltransferase family D3868_23885 PF00106 short chain dehydrogenase D3868_23905 PF02195 ParB-like nuclease domain D3868_23905 PF17762 HTH domain found in ParB protein D3868_23910 PF13614 AAA domain D3868_23915 PF08241 Methyltransferase domain D3868_23920 PF01547 Bacterial extracellular solute-binding protein D3868_23925 PF00528 Binding-protein-dependent transport system inner membrane component D3868_23930 PF00528 Binding-protein-dependent transport system inner membrane component D3868_23935 PF00005 ABC transporter D3868_23935 PF17912 MalK OB fold domain D3868_23940 PF08220 DeoR-like helix-turn-helix domain D3868_23940 PF00455 DeoR C terminal sensor domain D3868_23950 PF03358 NADPH-dependent FMN reductase D3868_23960 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain D3868_23960 PF08447 PAS fold D3868_23960 PF08447 PAS fold D3868_23960 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain D3868_23970 PF00005 ABC transporter D3868_23975 PF00005 ABC transporter D3868_23975 PF12399 Branched-chain amino acid ATP-binding cassette transporter D3868_23980 PF02653 Branched-chain amino acid transport system / permease component D3868_23980 PF11862 Domain of unknown function (DUF3382) D3868_23985 PF02653 Branched-chain amino acid transport system / permease component D3868_24000 PF01266 FAD dependent oxidoreductase D3868_24005 PF01546 Peptidase family M20/M25/M40 D3868_24005 PF07687 Peptidase dimerisation domain D3868_24010 PF00440 Bacterial regulatory proteins, tetR family D3868_24010 PF17932 Tetracyclin repressor-like, C-terminal domain D3868_24015 PF00501 AMP-binding enzyme D3868_24015 PF01553 Acyltransferase D3868_24020 PF01596 O-methyltransferase D3868_24050 PF02659 Putative manganese efflux pump D3868_24055 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain D3868_24055 PF00672 HAMP domain D3868_24055 PF17202 Single cache domain 3 D3868_24085 PF00128 Alpha amylase, catalytic domain D3868_24090 PF14542 GCN5-related N-acetyl-transferase D3868_24105 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase D3868_24105 PF00072 Response regulator receiver domain D3868_24105 PF13426 PAS domain D3868_24110 PF00072 Response regulator receiver domain D3868_24110 PF09308 LuxQ, periplasmic D3868_24110 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase D3868_24110 PF00512 His Kinase A (phospho-acceptor) domain D3868_24115 PF00196 Bacterial regulatory proteins, luxR family D3868_24115 PF00072 Response regulator receiver domain D3868_24130 PF00034 Cytochrome c D3868_24135 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain D3868_24135 PF00672 HAMP domain D3868_24135 PF02743 Cache domain D3868_24140 PF12729 Four helix bundle sensory module for signal transduction D3868_24140 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain D3868_24140 PF00672 HAMP domain D3868_24160 PF00975 Thioesterase domain D3868_24165 PF00005 ABC transporter D3868_24165 PF00664 ABC transporter transmembrane region D3868_24170 PF00005 ABC transporter D3868_24180 PF00501 AMP-binding enzyme D3868_24180 PF00668 Condensation domain D3868_24180 PF13193 AMP-binding enzyme C-terminal domain D3868_24180 PF00550 Phosphopantetheine attachment site D3868_24185 PF13193 AMP-binding enzyme C-terminal domain D3868_24185 PF00501 AMP-binding enzyme D3868_24185 PF00550 Phosphopantetheine attachment site D3868_24185 PF00668 Condensation domain D3868_24195 PF09335 SNARE associated Golgi protein D3868_24200 PF16901 C-terminal domain of alpha-glycerophosphate oxidase D3868_24200 PF01266 FAD dependent oxidoreductase D3868_24205 PF00005 ABC transporter D3868_24205 PF08402 TOBE domain D3868_24210 PF00005 ABC transporter D3868_24210 PF17912 MalK OB fold domain D3868_24215 PF00528 Binding-protein-dependent transport system inner membrane component D3868_24220 PF00528 Binding-protein-dependent transport system inner membrane component D3868_24235 PF00370 FGGY family of carbohydrate kinases, N-terminal domain D3868_24235 PF02782 FGGY family of carbohydrate kinases, C-terminal domain D3868_24255 PF00285 Citrate synthase, C-terminal domain D3868_24265 PF01914 MarC family integral membrane protein D3868_24270 PF00072 Response regulator receiver domain D3868_24280 PF02743 Cache domain D3868_24280 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain D3868_24280 PF00672 HAMP domain D3868_24285 PF01584 CheW-like domain D3868_24290 PF01339 CheB methylesterase D3868_24290 PF00072 Response regulator receiver domain D3868_24300 PF01739 CheR methyltransferase, SAM binding domain D3868_24300 PF03705 CheR methyltransferase, all-alpha domain D3868_24305 PF00072 Response regulator receiver domain D3868_24305 PF00990 Diguanylate cyclase, GGDEF domain D3868_24310 PF01584 CheW-like domain D3868_24310 PF02895 Signal transducing histidine kinase, homodimeric domain D3868_24310 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase D3868_24310 PF07194 P2 response regulator binding domain D3868_24310 PF01627 Hpt domain D3868_24320 PF00072 Response regulator receiver domain D3868_24320 PF00196 Bacterial regulatory proteins, luxR family D3868_24325 PF07568 Histidine kinase D3868_24325 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase D3868_24325 PF12282 Signal transduction histidine kinase D3868_24335 PF07687 Peptidase dimerisation domain D3868_24335 PF01546 Peptidase family M20/M25/M40 D3868_24345 PF00430 ATP synthase B/B' CF(0) D3868_24345 PF11154 Protein of unknown function (DUF2934) D3868_24350 PF02056 Family 4 glycosyl hydrolase D3868_24350 PF11975 Family 4 glycosyl hydrolase C-terminal domain D3868_24355 PF00232 Glycosyl hydrolase family 1 D3868_24370 PF00512 His Kinase A (phospho-acceptor) domain D3868_24370 PF02743 Cache domain D3868_24370 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase D3868_24375 PF00158 Sigma-54 interaction domain D3868_24375 PF00072 Response regulator receiver domain D3868_24375 PF02954 Bacterial regulatory protein, Fis family D3868_24380 PF00155 Aminotransferase class I and II D3868_24385 PF06826 Predicted Permease Membrane Region D3868_24385 PF02080 TrkA-C domain D3868_24395 PF00528 Binding-protein-dependent transport system inner membrane component D3868_24400 PF08402 TOBE domain D3868_24400 PF00005 ABC transporter D3868_24405 PF13419 Haloacid dehalogenase-like hydrolase D3868_24415 PF07687 Peptidase dimerisation domain D3868_24415 PF01546 Peptidase family M20/M25/M40 D3868_24420 PF00491 Arginase family D3868_24425 PF01042 Endoribonuclease L-PSP D3868_24430 PF08352 Oligopeptide/dipeptide transporter, C-terminal region D3868_24430 PF00005 ABC transporter D3868_24440 PF00528 Binding-protein-dependent transport system inner membrane component D3868_24445 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle D3868_24455 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family D3868_24455 PF03466 LysR substrate binding domain D3868_24460 PF05524 PEP-utilising enzyme, N-terminal D3868_24460 PF00391 PEP-utilising enzyme, mobile domain D3868_24460 PF02896 PEP-utilising enzyme, TIM barrel domain D3868_24465 PF00381 PTS HPr component phosphorylation site D3868_24470 PF03610 PTS system fructose IIA component D3868_24470 PF03830 PTS system sorbose subfamily IIB component D3868_24475 PF03668 P-loop ATPase protein family D3868_24480 PF07475 HPr Serine kinase C-terminal domain D3868_24480 PF02603 HPr Serine kinase N terminus D3868_24490 PF00512 His Kinase A (phospho-acceptor) domain D3868_24490 PF00672 HAMP domain D3868_24490 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase D3868_24490 PF13755 Sensor N-terminal transmembrane domain D3868_24490 PF13756 Stimulus-sensing domain D3868_24495 PF00072 Response regulator receiver domain D3868_24495 PF00486 Transcriptional regulatory protein, C terminal D3868_24510 PF17297 Phosphoenolpyruvate carboxykinase N-terminal domain D3868_24510 PF00821 Phosphoenolpyruvate carboxykinase C-terminal P-loop domain D3868_24515 PF01618 MotA/TolQ/ExbB proton channel family D3868_24525 PF01551 Peptidase family M23 D3868_24525 PF08525 Opacity-associated protein A N-terminal motif D3868_24525 PF01476 LysM domain D3868_24575 PF02627 Carboxymuconolactone decarboxylase family D3868_24580 PF13533 Biotin-lipoyl like D3868_24585 PF07690 Major Facilitator Superfamily D3868_24595 PF00535 Glycosyl transferase family 2 D3868_24595 PF01501 Glycosyl transferase family 8 D3868_24605 PF06472 ABC transporter transmembrane region 2 D3868_24605 PF00005 ABC transporter D3868_24615 PF00232 Glycosyl hydrolase family 1 D3868_24620 PF00232 Glycosyl hydrolase family 1 D3868_24625 PF05443 ROS/MUCR transcriptional regulator protein D3868_24630 PF01522 Polysaccharide deacetylase D3868_24635 PF01596 O-methyltransferase D3868_24640 PF00756 Putative esterase D3868_24650 PF00106 short chain dehydrogenase D3868_24665 PF00682 HMGL-like D3868_24670 PF00364 Biotin-requiring enzyme D3868_24670 PF00289 Biotin carboxylase, N-terminal domain D3868_24670 PF02785 Biotin carboxylase C-terminal domain D3868_24670 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain D3868_24675 PF00378 Enoyl-CoA hydratase/isomerase D3868_24680 PF01039 Carboxyl transferase domain D3868_24685 PF00441 Acyl-CoA dehydrogenase, C-terminal domain D3868_24685 PF02770 Acyl-CoA dehydrogenase, middle domain D3868_24685 PF02771 Acyl-CoA dehydrogenase, N-terminal domain D3868_24690 PF00108 Thiolase, N-terminal domain D3868_24690 PF02803 Thiolase, C-terminal domain D3868_24695 PF00441 Acyl-CoA dehydrogenase, C-terminal domain D3868_24695 PF02770 Acyl-CoA dehydrogenase, middle domain D3868_24695 PF02771 Acyl-CoA dehydrogenase, N-terminal domain D3868_24700 PF00171 Aldehyde dehydrogenase family D3868_24705 PF00501 AMP-binding enzyme D3868_24705 PF13193 AMP-binding enzyme C-terminal domain D3868_24710 PF00005 ABC transporter D3868_24725 PF02653 Branched-chain amino acid transport system / permease component D3868_24730 PF00501 AMP-binding enzyme D3868_24735 PF00005 ABC transporter D3868_24735 PF12399 Branched-chain amino acid ATP-binding cassette transporter D3868_24740 PF00501 AMP-binding enzyme D3868_24740 PF13193 AMP-binding enzyme C-terminal domain D3868_24745 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle D3868_24750 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase D3868_24750 PF00672 HAMP domain D3868_24750 PF01627 Hpt domain D3868_24750 PF00072 Response regulator receiver domain D3868_24750 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) D3868_24750 PF00512 His Kinase A (phospho-acceptor) domain D3868_24755 PF01339 CheB methylesterase D3868_24755 PF00072 Response regulator receiver domain D3868_24775 PF00593 TonB dependent receptor D3868_24775 PF07715 TonB-dependent Receptor Plug Domain D3868_24780 PF05977 Transmembrane secretion effector D3868_24790 PF00873 AcrB/AcrD/AcrF family D3868_24800 PF00425 chorismate binding enzyme D3868_24805 PF00501 AMP-binding enzyme D3868_24805 PF13193 AMP-binding enzyme C-terminal domain D3868_24810 PF00550 Phosphopantetheine attachment site D3868_24810 PF00857 Isochorismatase family D3868_24825 PF00501 AMP-binding enzyme D3868_24825 PF13193 AMP-binding enzyme C-terminal domain D3868_24825 PF00668 Condensation domain D3868_24825 PF00550 Phosphopantetheine attachment site D3868_24825 PF00975 Thioesterase domain D3868_24830 PF00756 Putative esterase D3868_24830 PF11806 Domain of unknown function (DUF3327) D3868_24835 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase D3868_24835 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase D3868_24840 PF02770 Acyl-CoA dehydrogenase, middle domain D3868_24840 PF02771 Acyl-CoA dehydrogenase, N-terminal domain D3868_24840 PF00441 Acyl-CoA dehydrogenase, C-terminal domain D3868_24845 PF07729 FCD domain D3868_24845 PF00392 Bacterial regulatory proteins, gntR family D3868_24850 PF13193 AMP-binding enzyme C-terminal domain D3868_24850 PF00501 AMP-binding enzyme D3868_24855 PF00440 Bacterial regulatory proteins, tetR family D3868_24855 PF08361 MAATS-type transcriptional repressor, C-terminal region D3868_24865 PF12802 MarR family D3868_24870 PF16363 GDP-mannose 4,6 dehydratase D3868_24875 PF00664 ABC transporter transmembrane region D3868_24875 PF00005 ABC transporter D3868_24880 PF00529 HlyD membrane-fusion protein of T1SS D3868_24880 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion D3868_24900 PF08241 Methyltransferase domain D3868_24915 PF13439 Glycosyltransferase Family 4 D3868_24915 PF00534 Glycosyl transferases group 1 D3868_24960 PF01970 Tripartite tricarboxylate transporter TctA family D3868_24965 PF03741 Integral membrane protein TerC family D3868_24975 PF01769 Divalent cation transporter D3868_24975 PF00571 CBS domain D3868_24975 PF03448 MgtE intracellular N domain D3868_24980 PF07729 FCD domain D3868_24980 PF00392 Bacterial regulatory proteins, gntR family D3868_24985 PF00171 Aldehyde dehydrogenase family D3868_24990 PF00202 Aminotransferase class-III D3868_24995 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family D3868_24995 PF03466 LysR substrate binding domain D3868_25015 PF00392 Bacterial regulatory proteins, gntR family D3868_25015 PF00155 Aminotransferase class I and II D3868_25020 PF13537 Glutamine amidotransferase domain D3868_25020 PF00733 Asparagine synthase D3868_25025 PF18419 ATP-grasp-like domain D3868_25025 PF04262 Glutamate-cysteine ligase D3868_25025 PF02655 ATP-grasp domain D3868_25030 PF05343 M42 glutamyl aminopeptidase D3868_25040 PF02554 Carbon starvation protein CstA D3868_25040 PF13722 5TM C-terminal transporter carbon starvation CstA D3868_25045 PF00072 Response regulator receiver domain D3868_25045 PF04397 LytTr DNA-binding domain D3868_25050 PF06580 Histidine kinase D3868_25050 PF07694 5TMR of 5TMR-LYT D3868_25060 PF05036 Sporulation related domain D3868_25060 PF03330 Lytic transglycolase D3868_25065 PF08548 Peptidase M10 serralysin C terminal D3868_25065 PF00413 Matrixin D3868_25065 PF00353 RTX calcium-binding nonapeptide repeat (4 copies) D3868_25085 PF01618 MotA/TolQ/ExbB proton channel family D3868_25090 PF02472 Biopolymer transport protein ExbD/TolR D3868_25095 PF03544 Gram-negative bacterial TonB protein C-terminal D3868_25100 PF00072 Response regulator receiver domain D3868_25100 PF00196 Bacterial regulatory proteins, luxR family D3868_25105 PF00989 PAS fold D3868_25105 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase D3868_25105 PF00512 His Kinase A (phospho-acceptor) domain D3868_25110 PF02812 Glu/Leu/Phe/Val dehydrogenase, dimerisation domain D3868_25110 PF00208 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase D3868_25125 PF00672 HAMP domain D3868_25125 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain D3868_25145 PF00497 Bacterial extracellular solute-binding proteins, family 3 D3868_25150 PF00497 Bacterial extracellular solute-binding proteins, family 3 D3868_25155 PF01627 Hpt domain D3868_25155 PF00672 HAMP domain D3868_25155 PF00512 His Kinase A (phospho-acceptor) domain D3868_25155 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) D3868_25155 PF00072 Response regulator receiver domain D3868_25155 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase D3868_25160 PF00072 Response regulator receiver domain D3868_25165 PF00072 Response regulator receiver domain D3868_25190 PF01970 Tripartite tricarboxylate transporter TctA family D3868_25200 PF03401 Tripartite tricarboxylate transporter family receptor D3868_25205 PF01081 KDPG and KHG aldolase D3868_25210 PF05035 2-keto-3-deoxy-galactonokinase D3868_25215 PF01614 Bacterial transcriptional regulator D3868_25215 PF09339 IclR helix-turn-helix domain D3868_25220 PF02861 Clp amino terminal domain, pathogenicity island component D3868_25220 PF07724 AAA domain (Cdc48 subfamily) D3868_25220 PF00004 ATPase family associated with various cellular activities (AAA) D3868_25220 PF10431 C-terminal, D2-small domain, of ClpB protein D3868_25220 PF17871 AAA lid domain D3868_25235 PF07729 FCD domain D3868_25235 PF00392 Bacterial regulatory proteins, gntR family D3868_25240 PF02652 L-lactate permease D3868_25245 PF01565 FAD binding domain D3868_25245 PF02913 FAD linked oxidases, C-terminal domain D3868_25250 PF02754 Cysteine-rich domain D3868_25255 PF02589 LUD domain D3868_25255 PF13183 4Fe-4S dicluster domain D3868_25255 PF11870 Domain of unknown function (DUF3390) D3868_25260 PF02589 LUD domain D3868_25275 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase D3868_25275 PF00512 His Kinase A (phospho-acceptor) domain D3868_25295 PF00924 Mechanosensitive ion channel D3868_25400 PF00724 NADH:flavin oxidoreductase / NADH oxidase family D3868_25425 PF01408 Oxidoreductase family, NAD-binding Rossmann fold D3868_25425 PF02894 Oxidoreductase family, C-terminal alpha/beta domain D3868_25435 PF00890 FAD binding domain D3868_25440 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain D3868_25440 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain D3868_25455 PF02653 Branched-chain amino acid transport system / permease component D3868_25460 PF12399 Branched-chain amino acid ATP-binding cassette transporter D3868_25460 PF00005 ABC transporter D3868_25465 PF00005 ABC transporter D3868_25470 PF13458 Periplasmic binding protein D3868_25480 PF01494 FAD binding domain D3868_25485 PF07883 Cupin domain D3868_25490 PF02798 Glutathione S-transferase, N-terminal domain D3868_25490 PF14497 Glutathione S-transferase, C-terminal domain D3868_25495 PF01557 Fumarylacetoacetate (FAA) hydrolase family D3868_25500 PF13610 DDE domain D3868_25505 PF07508 Recombinase D3868_25505 PF00239 Resolvase, N terminal domain D3868_25505 PF13408 Recombinase zinc beta ribbon domain D3868_25570 PF13007 Transposase C of IS166 homeodomain D3868_25570 PF13005 zinc-finger binding domain of transposase IS66 D3868_25570 PF13817 IS66 C-terminal element D3868_25570 PF03050 Transposase IS66 family D3868_25575 PF05717 IS66 Orf2 like protein D3868_25610 PF01527 Transposase D3868_25615 PF00107 Zinc-binding dehydrogenase D3868_25615 PF08240 Alcohol dehydrogenase GroES-like domain D3868_25620 PF00378 Enoyl-CoA hydratase/isomerase D3868_25625 PF13193 AMP-binding enzyme C-terminal domain D3868_25625 PF00501 AMP-binding enzyme D3868_25635 PF00528 Binding-protein-dependent transport system inner membrane component D3868_25645 PF08402 TOBE domain D3868_25645 PF00005 ABC transporter D3868_25670 PF03960 ArsC family D3868_25675 PF01758 Sodium Bile acid symporter family D3868_25680 PF03358 NADPH-dependent FMN reductase D3868_25695 PF00107 Zinc-binding dehydrogenase D3868_25695 PF08240 Alcohol dehydrogenase GroES-like domain D3868_25710 PF00005 ABC transporter D3868_25715 PF08021 Siderophore-interacting FAD-binding domain D3868_25715 PF04954 Siderophore-interacting protein D3868_25720 PF01032 FecCD transport family D3868_25730 PF07715 TonB-dependent Receptor Plug Domain D3868_25730 PF00593 TonB dependent receptor D3868_25735 PF00005 ABC transporter D3868_25735 PF00664 ABC transporter transmembrane region D3868_25745 PF00593 TonB dependent receptor D3868_25745 PF07715 TonB-dependent Receptor Plug Domain D3868_25750 PF04542 Sigma-70 region 2 D3868_25750 PF08281 Sigma-70, region 4 D3868_25760 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component D3868_25775 PF01546 Peptidase family M20/M25/M40 D3868_25775 PF07687 Peptidase dimerisation domain D3868_25780 PF00291 Pyridoxal-phosphate dependent enzyme D3868_25790 PF07286 Protein of unknown function (DUF1445) D3868_25795 PF01042 Endoribonuclease L-PSP D3868_25800 PF01037 Lrp/AsnC ligand binding domain D3868_25810 PF00353 RTX calcium-binding nonapeptide repeat (4 copies) D3868_25810 PF08548 Peptidase M10 serralysin C terminal D3868_25810 PF00413 Matrixin D3868_25830 PF00106 short chain dehydrogenase D3868_25855 PF13533 Biotin-lipoyl like D3868_25860 PF00873 AcrB/AcrD/AcrF family D3868_25880 PF13581 Histidine kinase-like ATPase domain D3868_25880 PF13426 PAS domain D3868_25880 PF07568 Histidine kinase D3868_25890 PF07167 Poly-beta-hydroxybutyrate polymerase (PhaC) N-terminus D3868_25890 PF00561 alpha/beta hydrolase fold D3868_25910 PF00501 AMP-binding enzyme D3868_25910 PF13193 AMP-binding enzyme C-terminal domain D3868_25915 PF14572 Phosphoribosyl synthetase-associated domain D3868_25915 PF13793 N-terminal domain of ribose phosphate pyrophosphokinase D3868_25920 PF04095 Nicotinate phosphoribosyltransferase (NAPRTase) family D3868_25920 PF17767 Nicotinate phosphoribosyltransferase (NAPRTase) N-terminal domain D3868_25930 PF00011 Hsp20/alpha crystallin family D3868_25940 PF03354 Phage Terminase D3868_25950 PF13610 DDE domain D3868_25975 PF00528 Binding-protein-dependent transport system inner membrane component D3868_25995 PF07687 Peptidase dimerisation domain D3868_25995 PF01546 Peptidase family M20/M25/M40 D3868_26000 PF01381 Helix-turn-helix D3868_26000 PF07883 Cupin domain D3868_26040 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain D3868_26040 PF02874 ATP synthase alpha/beta family, beta-barrel domain D3868_26045 PF02823 ATP synthase, Delta/Epsilon chain, beta-sandwich domain D3868_26060 PF00119 ATP synthase A chain D3868_26065 PF00137 ATP synthase subunit C D3868_26070 PF00430 ATP synthase B/B' CF(0) D3868_26075 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain D3868_26075 PF00306 ATP synthase alpha/beta chain, C terminal domain D3868_26075 PF02874 ATP synthase alpha/beta family, beta-barrel domain D3868_26080 PF00231 ATP synthase D3868_26090 PF13533 Biotin-lipoyl like D3868_26105 PF02311 AraC-like ligand binding domain D3868_26105 PF12833 Helix-turn-helix domain D3868_26120 PF00497 Bacterial extracellular solute-binding proteins, family 3 D3868_26125 PF00528 Binding-protein-dependent transport system inner membrane component D3868_26130 PF00528 Binding-protein-dependent transport system inner membrane component D3868_26135 PF00005 ABC transporter D3868_26140 PF00171 Aldehyde dehydrogenase family D3868_26145 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family D3868_26150 PF08501 Shikimate dehydrogenase substrate binding domain D3868_26150 PF01488 Shikimate / quinate 5-dehydrogenase D3868_26150 PF18317 Shikimate 5'-dehydrogenase C-terminal domain D3868_26155 PF00701 Dihydrodipicolinate synthetase family D3868_26160 PF04295 D-galactarate dehydratase / Altronate hydrolase, C terminus D3868_26160 PF08666 SAF domain D3868_26170 PF03401 Tripartite tricarboxylate transporter family receptor D3868_26185 PF02615 Malate/L-lactate dehydrogenase D3868_26190 PF07732 Multicopper oxidase D3868_26200 PF00072 Response regulator receiver domain D3868_26205 PF01614 Bacterial transcriptional regulator D3868_26205 PF09339 IclR helix-turn-helix domain D3868_26210 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle D3868_26215 PF00528 Binding-protein-dependent transport system inner membrane component D3868_26220 PF12911 N-terminal TM domain of oligopeptide transport permease C D3868_26220 PF00528 Binding-protein-dependent transport system inner membrane component D3868_26225 PF08352 Oligopeptide/dipeptide transporter, C-terminal region D3868_26225 PF00005 ABC transporter D3868_26230 PF08352 Oligopeptide/dipeptide transporter, C-terminal region D3868_26230 PF00005 ABC transporter D3868_26245 PF05985 Ethanolamine ammonia-lyase light chain (EutC) D3868_26250 PF06751 Ethanolamine ammonia lyase large subunit (EutB) D3868_26255 PF01266 FAD dependent oxidoreductase D3868_26265 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component D3868_26275 PF03480 Bacterial extracellular solute-binding protein, family 7 D3868_26280 PF00155 Aminotransferase class I and II D3868_26280 PF00392 Bacterial regulatory proteins, gntR family D3868_26310 PF07195 Flagellar hook-associated protein 2 C-terminus D3868_26310 PF07196 Flagellin hook IN motif D3868_26310 PF02465 Flagellar hook-associated protein 2 N-terminus D3868_26315 PF00700 Bacterial flagellin C-terminal helical region D3868_26315 PF00669 Bacterial flagellin N-terminal helical region D3868_26340 PF07559 Flagellar basal body protein FlaE D3868_26340 PF00460 Flagella basal body rod protein D3868_26340 PF06429 Flagellar basal body rod FlgEFG protein C-terminal D3868_26345 PF13860 FlgD Ig-like domain D3868_26345 PF03963 Flagellar hook capping protein - N-terminal region D3868_26345 PF13861 FlgD Tudor-like domain D3868_26360 PF00248 Aldo/keto reductase family D3868_26375 PF08402 TOBE domain D3868_26375 PF00005 ABC transporter D3868_26380 PF00593 TonB dependent receptor D3868_26380 PF07715 TonB-dependent Receptor Plug Domain D3868_26405 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase D3868_26405 PF00512 His Kinase A (phospho-acceptor) domain D3868_26405 PF08446 PAS fold D3868_26405 PF00360 Phytochrome region D3868_26405 PF01590 GAF domain D3868_26410 PF00486 Transcriptional regulatory protein, C terminal D3868_26410 PF00072 Response regulator receiver domain D3868_26415 PF00072 Response regulator receiver domain D3868_26415 PF00486 Transcriptional regulatory protein, C terminal D3868_26430 PF01799 [2Fe-2S] binding domain D3868_26430 PF00111 2Fe-2S iron-sulfur cluster binding domain D3868_26435 PF03450 CO dehydrogenase flavoprotein C-terminal domain D3868_26435 PF00941 FAD binding domain in molybdopterin dehydrogenase D3868_26440 PF01315 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain D3868_26440 PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase D3868_26445 PF01638 HxlR-like helix-turn-helix D3868_26450 PF07690 Major Facilitator Superfamily D3868_26465 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family D3868_26465 PF03466 LysR substrate binding domain D3868_26470 PF00753 Metallo-beta-lactamase superfamily D3868_26480 PF02522 Aminoglycoside 3-N-acetyltransferase D3868_26495 PF13193 AMP-binding enzyme C-terminal domain D3868_26495 PF00501 AMP-binding enzyme D3868_26500 PF02770 Acyl-CoA dehydrogenase, middle domain D3868_26500 PF02771 Acyl-CoA dehydrogenase, N-terminal domain D3868_26500 PF00441 Acyl-CoA dehydrogenase, C-terminal domain D3868_26505 PF00364 Biotin-requiring enzyme D3868_26505 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) D3868_26505 PF02817 e3 binding domain D3868_26510 PF00378 Enoyl-CoA hydratase/isomerase D3868_26515 PF02780 Transketolase, C-terminal domain D3868_26515 PF02779 Transketolase, pyrimidine binding domain D3868_26515 PF00364 Biotin-requiring enzyme D3868_26520 PF00676 Dehydrogenase E1 component D3868_26530 PF13458 Periplasmic binding protein D3868_26535 PF02653 Branched-chain amino acid transport system / permease component D3868_26540 PF12399 Branched-chain amino acid ATP-binding cassette transporter D3868_26540 PF00005 ABC transporter D3868_26545 PF00005 ABC transporter D3868_26550 PF00465 Iron-containing alcohol dehydrogenase D3868_26555 PF12833 Helix-turn-helix domain D3868_26555 PF01965 DJ-1/PfpI family D3868_26560 PF00106 short chain dehydrogenase D3868_26565 PF07690 Major Facilitator Superfamily D3868_26580 PF07715 TonB-dependent Receptor Plug Domain D3868_26580 PF00593 TonB dependent receptor D3868_26595 PF07729 FCD domain D3868_26595 PF00392 Bacterial regulatory proteins, gntR family D3868_26600 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component D3868_26605 PF04290 Tripartite ATP-independent periplasmic transporters, DctQ component D3868_26610 PF13378 Enolase C-terminal domain-like D3868_26610 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain D3868_26615 PF03480 Bacterial extracellular solute-binding protein, family 7 D3868_26620 PF00403 Heavy-metal-associated domain D3868_26625 PF01252 Signal peptidase (SPase) II D3868_26630 PF13462 Thioredoxin D3868_26635 PF01545 Cation efflux family D3868_26645 PF00701 Dihydrodipicolinate synthetase family D3868_26650 PF00528 Binding-protein-dependent transport system inner membrane component D3868_26655 PF00005 ABC transporter D3868_26655 PF08402 TOBE domain D3868_26665 PF01565 FAD binding domain D3868_26665 PF02913 FAD linked oxidases, C-terminal domain D3868_26680 PF00005 ABC transporter D3868_26685 PF13533 Biotin-lipoyl like D3868_26690 PF01325 Iron dependent repressor, N-terminal DNA binding domain D3868_26690 PF00480 ROK family D3868_26695 PF00005 ABC transporter D3868_26700 PF02653 Branched-chain amino acid transport system / permease component D3868_26705 PF13407 Periplasmic binding protein domain D3868_26715 PF02894 Oxidoreductase family, C-terminal alpha/beta domain D3868_26715 PF01408 Oxidoreductase family, NAD-binding Rossmann fold D3868_26725 PF00370 FGGY family of carbohydrate kinases, N-terminal domain D3868_26725 PF02782 FGGY family of carbohydrate kinases, C-terminal domain D3868_26730 PF03466 LysR substrate binding domain D3868_26730 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family D3868_26740 PF00175 Oxidoreductase NAD-binding domain D3868_26740 PF00042 Globin D3868_26740 PF00970 Oxidoreductase FAD-binding domain D3868_26745 PF02798 Glutathione S-transferase, N-terminal domain D3868_26750 PF07729 FCD domain D3868_26750 PF00392 Bacterial regulatory proteins, gntR family D3868_26760 PF00202 Aminotransferase class-III D3868_26770 PF01638 HxlR-like helix-turn-helix D3868_26785 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase D3868_26785 PF05231 MASE1 D3868_26785 PF07730 Histidine kinase D3868_26790 PF00072 Response regulator receiver domain D3868_26790 PF00196 Bacterial regulatory proteins, luxR family D3868_26800 PF13416 Bacterial extracellular solute-binding protein D3868_26805 PF08402 TOBE domain D3868_26805 PF00005 ABC transporter D3868_26810 PF00528 Binding-protein-dependent transport system inner membrane component D3868_26815 PF00528 Binding-protein-dependent transport system inner membrane component D3868_26820 PF05544 Proline racemase D3868_26825 PF00392 Bacterial regulatory proteins, gntR family D3868_26825 PF07729 FCD domain D3868_26835 PF00330 Aconitase family (aconitate hydratase) D3868_26840 PF00694 Aconitase C-terminal domain D3868_26850 PF00005 ABC transporter D3868_26855 PF00528 Binding-protein-dependent transport system inner membrane component D3868_26860 PF00528 Binding-protein-dependent transport system inner membrane component D3868_26870 PF13360 PQQ-like domain D3868_26870 PF00069 Protein kinase domain D3868_26895 PF05985 Ethanolamine ammonia-lyase light chain (EutC) D3868_26900 PF06751 Ethanolamine ammonia lyase large subunit (EutB) D3868_26960 PF08240 Alcohol dehydrogenase GroES-like domain D3868_26975 PF17969 L,D-transpeptidase C-terminal domain D3868_26975 PF03734 L,D-transpeptidase catalytic domain D3868_26990 PF02687 FtsX-like permease family D3868_26990 PF00005 ABC transporter D3868_26990 PF12704 MacB-like periplasmic core domain D3868_27000 PF00690 Cation transporter/ATPase, N-terminus D3868_27000 PF00689 Cation transporting ATPase, C-terminus D3868_27015 PF02492 CobW/HypB/UreG, nucleotide-binding domain D3868_27015 PF07683 Cobalamin synthesis protein cobW C-terminal domain D3868_27025 PF02979 Nitrile hydratase, alpha chain D3868_27040 PF12833 Helix-turn-helix domain D3868_27040 PF01965 DJ-1/PfpI family D3868_27070 PF02082 Transcriptional regulator D3868_27075 PF00042 Globin D3868_27075 PF00175 Oxidoreductase NAD-binding domain D3868_27075 PF00970 Oxidoreductase FAD-binding domain D3868_27090 PF00561 alpha/beta hydrolase fold D3868_27095 PF01965 DJ-1/PfpI family D3868_27120 PF00005 ABC transporter D3868_27125 PF00528 Binding-protein-dependent transport system inner membrane component D3868_27135 PF00378 Enoyl-CoA hydratase/isomerase D3868_27140 PF02515 CoA-transferase family III D3868_27145 PF01425 Amidase D3868_27160 PF13411 MerR HTH family regulatory protein D3868_27165 PF00392 Bacterial regulatory proteins, gntR family D3868_27165 PF00155 Aminotransferase class I and II D3868_27175 PF07715 TonB-dependent Receptor Plug Domain D3868_27175 PF00593 TonB dependent receptor D3868_27185 PF04542 Sigma-70 region 2 D3868_27185 PF08281 Sigma-70, region 4 D3868_27200 PF00892 EamA-like transporter family D3868_27205 PF08448 PAS fold D3868_27205 PF00512 His Kinase A (phospho-acceptor) domain D3868_27205 PF00072 Response regulator receiver domain D3868_27205 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase D3868_27205 PF13426 PAS domain D3868_27215 PF00392 Bacterial regulatory proteins, gntR family D3868_27215 PF07702 UTRA domain D3868_27240 PF01297 Zinc-uptake complex component A periplasmic D3868_27245 PF00005 ABC transporter D3868_27260 PF12704 MacB-like periplasmic core domain D3868_27260 PF02687 FtsX-like permease family D3868_27260 PF00005 ABC transporter D3868_27270 PF00593 TonB dependent receptor D3868_27270 PF07715 TonB-dependent Receptor Plug Domain D3868_27275 PF16220 Domain of unknown function (DUF4880) D3868_27275 PF04773 FecR protein D3868_27280 PF04542 Sigma-70 region 2 D3868_27280 PF08281 Sigma-70, region 4 D3868_27290 PF02397 Bacterial sugar transferase D3868_27305 PF03808 Glycosyl transferase WecB/TagA/CpsF family D3868_27365 PF12833 Helix-turn-helix domain D3868_27365 PF02311 AraC-like ligand binding domain D3868_27375 PF07715 TonB-dependent Receptor Plug Domain D3868_27375 PF00593 TonB dependent receptor D3868_27400 PF02683 Cytochrome C biogenesis protein transmembrane region D3868_27400 PF17991 Thioredoxin like C-terminal domain D3868_27400 PF00578 AhpC/TSA family D3868_27405 PF00561 alpha/beta hydrolase fold D3868_27410 PF02566 OsmC-like protein D3868_27415 PF01047 MarR family D3868_27420 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family D3868_27420 PF03466 LysR substrate binding domain D3868_27460 PF04303 PrpF protein D3868_27465 PF00694 Aconitase C-terminal domain D3868_27465 PF00330 Aconitase family (aconitate hydratase) D3868_27470 PF00285 Citrate synthase, C-terminal domain D3868_27480 PF02867 Ribonucleotide reductase, barrel domain D3868_27480 PF00317 Ribonucleotide reductase, all-alpha domain D3868_27480 PF03477 ATP cone domain D3868_27490 PF09856 Predicted transcriptional regulator (DUF2083) D3868_27490 PF06114 IrrE N-terminal-like domain D3868_27490 PF01381 Helix-turn-helix D3868_27495 PF01717 Cobalamin-independent synthase, Catalytic domain D3868_27495 PF08267 Cobalamin-independent synthase, N-terminal domain D3868_27500 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family D3868_27500 PF03466 LysR substrate binding domain D3868_27510 PF01642 Methylmalonyl-CoA mutase D3868_27515 PF02310 B12 binding domain D3868_27515 PF01642 Methylmalonyl-CoA mutase D3868_27520 PF13737 Transposase DDE domain D3868_27535 PF04466 Phage terminase large subunit D3868_27535 PF17288 Terminase RNAseH like domain D3868_27555 PF00356 Bacterial regulatory proteins, lacI family D3868_27560 PF02929 Beta galactosidase small chain D3868_27560 PF00703 Glycosyl hydrolases family 2 D3868_27560 PF02836 Glycosyl hydrolases family 2, TIM barrel domain D3868_27560 PF02837 Glycosyl hydrolases family 2, sugar binding domain D3868_27560 PF16353 Domain of unknown function(DUF4981) D3868_27565 PF03480 Bacterial extracellular solute-binding protein, family 7 D3868_27575 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component D3868_27580 PF01055 Glycosyl hydrolases family 31 D3868_27580 PF13802 Galactose mutarotase-like D3868_27580 PF17137 Domain of unknown function (DUF5110) D3868_27580 PF16338 Domain of unknown function (DUF4968) D3868_27590 PF03741 Integral membrane protein TerC family D3868_27595 PF01042 Endoribonuclease L-PSP D3868_27600 PF00497 Bacterial extracellular solute-binding proteins, family 3 D3868_27605 PF01042 Endoribonuclease L-PSP D3868_27610 PF01266 FAD dependent oxidoreductase D3868_27615 PF07992 Pyridine nucleotide-disulphide oxidoreductase D3868_27615 PF04324 BFD-like [2Fe-2S] binding domain D3868_27625 PF01266 FAD dependent oxidoreductase D3868_27630 PF00528 Binding-protein-dependent transport system inner membrane component D3868_27635 PF00528 Binding-protein-dependent transport system inner membrane component D3868_27640 PF08402 TOBE domain D3868_27640 PF00005 ABC transporter D3868_27650 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family D3868_27650 PF03466 LysR substrate binding domain D3868_27655 PF01070 FMN-dependent dehydrogenase D3868_27660 PF07883 Cupin domain D3868_27660 PF01381 Helix-turn-helix D3868_27675 PF05853 beta-keto acid cleavage enzyme D3868_27680 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain D3868_27680 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain D3868_27685 PF00072 Response regulator receiver domain D3868_27685 PF00158 Sigma-54 interaction domain D3868_27685 PF02954 Bacterial regulatory protein, Fis family D3868_27690 PF00873 AcrB/AcrD/AcrF family D3868_27695 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion D3868_27700 PF00707 Translation initiation factor IF-3, C-terminal domain D3868_27700 PF05198 Translation initiation factor IF-3, N-terminal domain D3868_27705 PF01165 Ribosomal protein S21 D3868_27710 PF00313 'Cold-shock' DNA-binding domain D3868_27715 PF12282 Signal transduction histidine kinase D3868_27715 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase D3868_27715 PF07568 Histidine kinase D3868_27720 PF00072 Response regulator receiver domain D3868_27730 PF00005 ABC transporter D3868_27735 PF00005 ABC transporter D3868_27735 PF12399 Branched-chain amino acid ATP-binding cassette transporter D3868_27750 PF13458 Periplasmic binding protein D3868_27755 PF07690 Major Facilitator Superfamily D3868_27865 PF00959 Phage lysozyme D3868_28110 PF10073 Uncharacterized protein conserved in bacteria (DUF2312) D3868_28280 PF02585 GlcNAc-PI de-N-acetylase D3868_28285 PF03737 Aldolase/RraA D3868_28290 PF04303 PrpF protein D3868_28295 PF04909 Amidohydrolase D3868_28305 PF02900 Catalytic LigB subunit of aromatic ring-opening dioxygenase D3868_28310 PF14759 Reductase C-terminal D3868_28310 PF07992 Pyridine nucleotide-disulphide oxidoreductase D3868_28315 PF00111 2Fe-2S iron-sulfur cluster binding domain D3868_28320 PF00067 Cytochrome P450 D3868_28335 PF03466 LysR substrate binding domain D3868_28335 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family D3868_28360 PF02803 Thiolase, C-terminal domain D3868_28360 PF00108 Thiolase, N-terminal domain D3868_28365 PF07690 Major Facilitator Superfamily D3868_28370 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family D3868_28370 PF03466 LysR substrate binding domain D3868_28380 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion D3868_28385 PF00873 AcrB/AcrD/AcrF family D3868_28400 PF13545 Crp-like helix-turn-helix domain D3868_28425 PF00034 Cytochrome c D3868_28440 PF02416 mttA/Hcf106 family D3868_28450 PF05573 NosL D3868_28455 PF12679 ABC-2 family transporter protein D3868_28460 PF00005 ABC transporter D3868_28465 PF05048 Periplasmic copper-binding protein (NosD) D3868_28475 PF18793 Nitrous oxide reductase propeller repeat 2 D3868_28475 PF13473 Cupredoxin-like domain D3868_28475 PF18764 Nitrous oxide reductase propeller repeat D3868_28480 PF04205 FMN-binding domain D3868_28480 PF12801 4Fe-4S binding domain D3868_28490 PF00092 von Willebrand factor type A domain D3868_28495 PF08406 CbbQ/NirQ/NorQ C-terminal D3868_28495 PF07728 AAA domain (dynein-related subfamily) D3868_28500 PF00115 Cytochrome C and Quinol oxidase polypeptide I D3868_28505 PF00034 Cytochrome c D3868_28530 PF07690 Major Facilitator Superfamily D3868_28575 PF00437 Type II/IV secretion system protein D3868_28580 PF01883 Iron-sulfur cluster assembly protein D3868_28580 PF10609 NUBPL iron-transfer P-loop NTPase D3868_28590 PF13629 Pilus formation protein N terminal region D3868_28590 PF04972 BON domain D3868_28590 PF00263 Bacterial type II and III secretion system protein D3868_28615 PF05247 Flagellar transcriptional activator (FlhD) D3868_28625 PF00313 'Cold-shock' DNA-binding domain D3868_28635 PF00271 Helicase conserved C-terminal domain D3868_28635 PF00270 DEAD/DEAH box helicase D3868_28660 PF00005 ABC transporter D3868_28660 PF08402 TOBE domain D3868_28685 PF00501 AMP-binding enzyme D3868_28685 PF13193 AMP-binding enzyme C-terminal domain D3868_28690 PF00107 Zinc-binding dehydrogenase D3868_28690 PF08240 Alcohol dehydrogenase GroES-like domain D3868_28695 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase D3868_28695 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase D3868_28705 PF00171 Aldehyde dehydrogenase family D3868_28710 PF00378 Enoyl-CoA hydratase/isomerase D3868_28715 PF07729 FCD domain D3868_28715 PF00392 Bacterial regulatory proteins, gntR family D3868_28755 PF05717 IS66 Orf2 like protein D3868_28800 PF02311 AraC-like ligand binding domain D3868_28800 PF12833 Helix-turn-helix domain D3868_28865 PF00528 Binding-protein-dependent transport system inner membrane component D3868_28870 PF00005 ABC transporter D3868_28880 PF14537 Cytochrome c3 D3868_28880 PF00890 FAD binding domain D3868_28885 PF00724 NADH:flavin oxidoreductase / NADH oxidase family D3868_28890 PF03358 NADPH-dependent FMN reductase D3868_28890 PF04205 FMN-binding domain D3868_28890 PF00890 FAD binding domain D3868_28910 PF01408 Oxidoreductase family, NAD-binding Rossmann fold D3868_28910 PF02894 Oxidoreductase family, C-terminal alpha/beta domain D3868_28920 PF00890 FAD binding domain D3868_28925 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain D3868_28925 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain D3868_28960 PF13458 Periplasmic binding protein D3868_29010 PF02154 Flagellar motor switch protein FliM D3868_29010 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term D3868_29020 PF08345 Flagellar M-ring protein C-terminal D3868_29020 PF01514 Secretory protein of YscJ/FliF family D3868_29030 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term D3868_29035 PF00813 FliP family D3868_29045 PF01706 FliG C-terminal domain D3868_29045 PF14842 FliG N-terminal domain D3868_29045 PF14841 FliG middle domain D3868_29055 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain D3868_29055 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain D3868_29065 PF00924 Mechanosensitive ion channel D3868_29085 PF00171 Aldehyde dehydrogenase family D3868_29090 PF01593 Flavin containing amine oxidoreductase D3868_29095 PF01593 Flavin containing amine oxidoreductase D3868_29105 PF00535 Glycosyl transferase family 2 D3868_29205 PF00437 Type II/IV secretion system protein D3868_29220 PF04972 BON domain D3868_29220 PF00263 Bacterial type II and III secretion system protein D3868_29220 PF13629 Pilus formation protein N terminal region D3868_29240 PF03150 Di-haem cytochrome c peroxidase D3868_29275 PF01425 Amidase D3868_29280 PF02615 Malate/L-lactate dehydrogenase D3868_29290 PF13185 GAF domain D3868_29290 PF00990 Diguanylate cyclase, GGDEF domain D3868_29295 PF00860 Permease family D3868_29300 PF00072 Response regulator receiver domain D3868_29300 PF13188 PAS domain D3868_29300 PF08448 PAS fold D3868_29300 PF00512 His Kinase A (phospho-acceptor) domain D3868_29300 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase D3868_29305 PF00664 ABC transporter transmembrane region D3868_29305 PF00005 ABC transporter D3868_29315 PF03275 UDP-galactopyranose mutase D3868_29330 PF00732 GMC oxidoreductase D3868_29330 PF05199 GMC oxidoreductase D3868_29340 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily D3868_29355 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family D3868_29355 PF03466 LysR substrate binding domain D3868_29360 PF00023 Ankyrin repeat D3868_29360 PF12796 Ankyrin repeats (3 copies) D3868_29375 PF08281 Sigma-70, region 4 D3868_29375 PF04542 Sigma-70 region 2 D3868_29395 PF03480 Bacterial extracellular solute-binding protein, family 7 D3868_29405 PF03328 HpcH/HpaI aldolase/citrate lyase family D3868_29415 PF03972 MmgE/PrpD family D3868_29420 PF02771 Acyl-CoA dehydrogenase, N-terminal domain D3868_29420 PF02770 Acyl-CoA dehydrogenase, middle domain D3868_29420 PF00441 Acyl-CoA dehydrogenase, C-terminal domain D3868_29425 PF02515 CoA-transferase family III D3868_29430 PF00392 Bacterial regulatory proteins, gntR family D3868_29430 PF07729 FCD domain D3868_29440 PF01425 Amidase D3868_29450 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component D3868_29455 PF07702 UTRA domain D3868_29455 PF00392 Bacterial regulatory proteins, gntR family D3868_29460 PF00528 Binding-protein-dependent transport system inner membrane component D3868_29460 PF12911 N-terminal TM domain of oligopeptide transport permease C D3868_29465 PF00528 Binding-protein-dependent transport system inner membrane component D3868_29495 PF00512 His Kinase A (phospho-acceptor) domain D3868_29495 PF00672 HAMP domain D3868_29495 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase D3868_29500 PF00072 Response regulator receiver domain D3868_29500 PF00486 Transcriptional regulatory protein, C terminal D3868_29510 PF03741 Integral membrane protein TerC family D3868_29515 PF01970 Tripartite tricarboxylate transporter TctA family D3868_29540 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family D3868_29540 PF03466 LysR substrate binding domain D3868_29545 PF08666 SAF domain D3868_29545 PF04295 D-galactarate dehydratase / Altronate hydrolase, C terminus D3868_29550 PF02614 Glucuronate isomerase D3868_29555 PF02142 MGS-like domain D3868_29560 PF07729 FCD domain D3868_29560 PF00392 Bacterial regulatory proteins, gntR family D3868_29565 PF00248 Aldo/keto reductase family D3868_29570 PF00593 TonB dependent receptor D3868_29570 PF07715 TonB-dependent Receptor Plug Domain D3868_29590 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component D3868_29600 PF03480 Bacterial extracellular solute-binding protein, family 7 D3868_29605 PF07883 Cupin domain D3868_29615 PF07729 FCD domain D3868_29615 PF00392 Bacterial regulatory proteins, gntR family D3868_29630 PF01232 Mannitol dehydrogenase Rossmann domain D3868_29630 PF08125 Mannitol dehydrogenase C-terminal domain D3868_29635 PF03786 D-mannonate dehydratase (UxuA) D3868_29675 PF07995 Glucose / Sorbosone dehydrogenase D3868_29685 PF00588 SpoU rRNA Methylase family D3868_29690 PF03466 LysR substrate binding domain D3868_29690 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family D3868_29695 PF00199 Catalase D3868_29695 PF06628 Catalase-related immune-responsive D3868_29700 PF01638 HxlR-like helix-turn-helix D3868_29705 PF05368 NmrA-like family D3868_29710 PF00873 AcrB/AcrD/AcrF family D3868_29715 PF13533 Biotin-lipoyl like D3868_29720 PF00440 Bacterial regulatory proteins, tetR family D3868_29730 PF07732 Multicopper oxidase D3868_29730 PF07731 Multicopper oxidase D3868_29730 PF00394 Multicopper oxidase D3868_29735 PF04230 Polysaccharide pyruvyl transferase D3868_29745 PF00528 Binding-protein-dependent transport system inner membrane component D3868_29755 PF01232 Mannitol dehydrogenase Rossmann domain D3868_29755 PF08125 Mannitol dehydrogenase C-terminal domain D3868_29760 PF01263 Aldose 1-epimerase D3868_29775 PF01408 Oxidoreductase family, NAD-binding Rossmann fold D3868_29780 PF02653 Branched-chain amino acid transport system / permease component D3868_29785 PF00005 ABC transporter D3868_29795 PF13407 Periplasmic binding protein domain D3868_29800 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family D3868_29800 PF03466 LysR substrate binding domain D3868_29810 PF00701 Dihydrodipicolinate synthetase family D3868_29815 PF00171 Aldehyde dehydrogenase family D3868_29820 PF13407 Periplasmic binding protein domain D3868_29825 PF00005 ABC transporter D3868_29830 PF02653 Branched-chain amino acid transport system / permease component D3868_29835 PF02653 Branched-chain amino acid transport system / permease component D3868_29840 PF01195 Peptidyl-tRNA hydrolase D3868_29845 PF14693 Ribosomal protein TL5, C-terminal domain D3868_29845 PF01386 Ribosomal L25p family D3868_29850 PF13793 N-terminal domain of ribose phosphate pyrophosphokinase D3868_29850 PF14572 Phosphoribosyl synthetase-associated domain D3868_29870 PF01790 Prolipoprotein diacylglyceryl transferase D3868_29875 PF01370 NAD dependent epimerase/dehydratase family D3868_29880 PF00501 AMP-binding enzyme D3868_29880 PF13193 AMP-binding enzyme C-terminal domain D3868_29885 PF00313 'Cold-shock' DNA-binding domain D3868_29890 PF03975 CheD chemotactic sensory transduction D3868_29900 PF02896 PEP-utilising enzyme, TIM barrel domain D3868_29900 PF01326 Pyruvate phosphate dikinase, PEP/pyruvate binding domain D3868_29900 PF00391 PEP-utilising enzyme, mobile domain D3868_29910 PF06968 Biotin and Thiamin Synthesis associated domain D3868_29910 PF04055 Radical SAM superfamily D3868_29915 PF00202 Aminotransferase class-III D3868_29920 PF13649 Methyltransferase domain D3868_29930 PF00155 Aminotransferase class I and II D3868_29945 PF00849 RNA pseudouridylate synthase D3868_29955 PF00684 DnaJ central domain D3868_29955 PF01556 DnaJ C terminal domain D3868_29955 PF00226 DnaJ domain D3868_29960 PF00483 Nucleotidyl transferase D3868_30010 PF01546 Peptidase family M20/M25/M40 D3868_30010 PF07687 Peptidase dimerisation domain D3868_30015 PF00005 ABC transporter D3868_30015 PF08352 Oligopeptide/dipeptide transporter, C-terminal region D3868_30020 PF08352 Oligopeptide/dipeptide transporter, C-terminal region D3868_30020 PF00005 ABC transporter D3868_30025 PF00528 Binding-protein-dependent transport system inner membrane component D3868_30025 PF12911 N-terminal TM domain of oligopeptide transport permease C D3868_30030 PF00528 Binding-protein-dependent transport system inner membrane component D3868_30035 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle D3868_30040 PF00171 Aldehyde dehydrogenase family D3868_30050 PF03099 Biotin/lipoate A/B protein ligase family D3868_30065 PF01769 Divalent cation transporter D3868_30065 PF00571 CBS domain D3868_30065 PF03448 MgtE intracellular N domain D3868_30070 PF05690 Thiazole biosynthesis protein ThiG D3868_30070 PF01266 FAD dependent oxidoreductase D3868_30080 PF05690 Thiazole biosynthesis protein ThiG D3868_30115 PF00072 Response regulator receiver domain D3868_30115 PF00486 Transcriptional regulatory protein, C terminal D3868_30120 PF01323 DSBA-like thioredoxin domain D3868_30130 PF11614 IG-like fold at C-terminal of FixG, putative oxidoreductase D3868_30130 PF12801 4Fe-4S binding domain D3868_30130 PF13746 4Fe-4S dicluster domain D3868_30135 PF00392 Bacterial regulatory proteins, gntR family D3868_30135 PF00155 Aminotransferase class I and II D3868_30140 PF00311 Phosphoenolpyruvate carboxylase D3868_30150 PF01116 Fructose-bisphosphate aldolase class-II D3868_30165 PF13746 4Fe-4S dicluster domain D3868_30165 PF12801 4Fe-4S binding domain D3868_30165 PF11614 IG-like fold at C-terminal of FixG, putative oxidoreductase D3868_30175 PF00360 Phytochrome region D3868_30175 PF00512 His Kinase A (phospho-acceptor) domain D3868_30175 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase D3868_30175 PF01590 GAF domain D3868_30175 PF08446 PAS fold D3868_30180 PF00072 Response regulator receiver domain D3868_30185 PF00072 Response regulator receiver domain D3868_30185 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase D3868_30185 PF00512 His Kinase A (phospho-acceptor) domain D3868_30185 PF08448 PAS fold D3868_30185 PF13188 PAS domain D3868_30190 PF05524 PEP-utilising enzyme, N-terminal D3868_30190 PF00381 PTS HPr component phosphorylation site D3868_30190 PF00391 PEP-utilising enzyme, mobile domain D3868_30190 PF02896 PEP-utilising enzyme, TIM barrel domain D3868_30190 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 D3868_30195 PF00294 pfkB family carbohydrate kinase D3868_30200 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit D3868_30200 PF02378 Phosphotransferase system, EIIC D3868_30205 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase D3868_30205 PF00512 His Kinase A (phospho-acceptor) domain D3868_30215 PF17092 Penicillin-binding protein OB-like domain D3868_30215 PF00912 Transglycosylase D3868_30215 PF00905 Penicillin binding protein transpeptidase domain D3868_30220 PF06426 Serine acetyltransferase, N-terminal D3868_30220 PF00132 Bacterial transferase hexapeptide (six repeats) D3868_30235 PF03466 LysR substrate binding domain D3868_30235 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family D3868_30245 PF08402 TOBE domain D3868_30245 PF00005 ABC transporter D3868_30250 PF00528 Binding-protein-dependent transport system inner membrane component D3868_30255 PF00528 Binding-protein-dependent transport system inner membrane component D3868_30265 PF00795 Carbon-nitrogen hydrolase D3868_30270 PF13291 ACT domain D3868_30270 PF00291 Pyridoxal-phosphate dependent enzyme D3868_30275 PF00860 Permease family D3868_30280 PF00708 Acylphosphatase D3868_30305 PF00034 Cytochrome c D3868_30315 PF03707 Bacterial signalling protein N terminal repeat D3868_30315 PF00990 Diguanylate cyclase, GGDEF domain D3868_30315 PF00563 EAL domain D3868_30325 PF00005 ABC transporter D3868_30350 PF01612 3'-5' exonuclease D3868_30350 PF00476 DNA polymerase family A D3868_30350 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain D3868_30350 PF01367 5'-3' exonuclease, C-terminal SAM fold D3868_30370 PF06071 Protein of unknown function (DUF933) D3868_30370 PF01926 50S ribosome-binding GTPase D3868_30375 PF13188 PAS domain D3868_30375 PF00563 EAL domain D3868_30375 PF00990 Diguanylate cyclase, GGDEF domain D3868_30375 PF03707 Bacterial signalling protein N terminal repeat D3868_30385 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family D3868_30385 PF03466 LysR substrate binding domain D3868_30390 PF07690 Major Facilitator Superfamily D3868_30405 PF00108 Thiolase, N-terminal domain D3868_30405 PF02803 Thiolase, C-terminal domain D3868_30410 PF12697 Alpha/beta hydrolase family D3868_30410 PF08241 Methyltransferase domain D3868_30415 PF05233 PHB accumulation regulatory domain D3868_30415 PF07879 PHB/PHA accumulation regulator DNA-binding domain D3868_30440 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain D3868_30440 PF02777 Iron/manganese superoxide dismutases, C-terminal domain D3868_30505 PF00150 Cellulase (glycosyl hydrolase family 5) D3868_30520 PF00925 GTP cyclohydrolase II D3868_30545 PF02653 Branched-chain amino acid transport system / permease component D3868_30555 PF07969 Amidohydrolase family D3868_30560 PF00672 HAMP domain D3868_30560 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain D3868_30565 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase D3868_30565 PF00989 PAS fold D3868_30565 PF00512 His Kinase A (phospho-acceptor) domain D3868_30570 PF02515 CoA-transferase family III D3868_30585 PF09278 MerR, DNA binding D3868_30585 PF00376 MerR family regulatory protein D3868_30595 PF09339 IclR helix-turn-helix domain D3868_30595 PF01614 Bacterial transcriptional regulator D3868_30600 PF10588 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region D3868_30600 PF01568 Molydopterin dinucleotide binding domain D3868_30600 PF04879 Molybdopterin oxidoreductase Fe4S4 domain D3868_30600 PF00384 Molybdopterin oxidoreductase D3868_30600 PF12838 4Fe-4S dicluster domain D3868_30605 PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit D3868_30605 PF10589 NADH-ubiquinone oxidoreductase-F iron-sulfur binding region D3868_30605 PF10531 SLBB domain D3868_30610 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain D3868_30610 PF00205 Thiamine pyrophosphate enzyme, central domain D3868_30610 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain D3868_30615 PF07729 FCD domain D3868_30615 PF00392 Bacterial regulatory proteins, gntR family D3868_30620 PF00781 Diacylglycerol kinase catalytic domain D3868_30625 PF13419 Haloacid dehalogenase-like hydrolase D3868_30630 PF01594 AI-2E family transporter D3868_30635 PF09849 Uncharacterized protein conserved in bacteria (DUF2076) D3868_30640 PF02812 Glu/Leu/Phe/Val dehydrogenase, dimerisation domain D3868_30640 PF00208 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase D3868_30655 PF03551 Transcriptional regulator PadR-like family D3868_30655 PF13847 Methyltransferase domain D3868_30670 PF00486 Transcriptional regulatory protein, C terminal D3868_30670 PF00072 Response regulator receiver domain D3868_30675 PF03812 2-keto-3-deoxygluconate permease D3868_30680 PF07729 FCD domain D3868_30680 PF00392 Bacterial regulatory proteins, gntR family D3868_30685 PF04962 KduI/IolB family D3868_30700 PF00871 Acetokinase family D3868_30705 PF01515 Phosphate acetyl/butaryl transferase D3868_30710 PF00113 Enolase, C-terminal TIM barrel domain D3868_30710 PF03952 Enolase, N-terminal domain D3868_30715 PF01228 Glycine radical D3868_30715 PF02901 Pyruvate formate lyase-like D3868_30720 PF02685 Glucokinase D3868_30720 PF01418 Helix-turn-helix domain, rpiR family D3868_30720 PF01380 SIS domain D3868_30725 PF00873 AcrB/AcrD/AcrF family D3868_30730 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion D3868_30730 PF00529 HlyD membrane-fusion protein of T1SS D3868_30735 PF00440 Bacterial regulatory proteins, tetR family D3868_30740 PF00440 Bacterial regulatory proteins, tetR family D3868_30740 PF17922 Tetracyclin repressor-like, C-terminal domain D3868_30745 PF16736 Single Cache-like D3868_30745 PF00512 His Kinase A (phospho-acceptor) domain D3868_30745 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase D3868_30745 PF00989 PAS fold D3868_30750 PF00360 Phytochrome region D3868_30750 PF01590 GAF domain D3868_30750 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase D3868_30750 PF00512 His Kinase A (phospho-acceptor) domain D3868_30750 PF08446 PAS fold D3868_30760 PF02887 Pyruvate kinase, alpha/beta domain D3868_30760 PF00224 Pyruvate kinase, barrel domain D3868_30765 PF04055 Radical SAM superfamily D3868_30770 PF01226 Formate/nitrite transporter D3868_30775 PF00892 EamA-like transporter family D3868_30780 PF00392 Bacterial regulatory proteins, gntR family D3868_30780 PF07729 FCD domain D3868_30785 PF03480 Bacterial extracellular solute-binding protein, family 7 D3868_30795 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component D3868_30800 PF03741 Integral membrane protein TerC family D3868_30805 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain D3868_30805 PF00672 HAMP domain D3868_30825 PF00313 'Cold-shock' DNA-binding domain D3868_30830 PF07559 Flagellar basal body protein FlaE D3868_30830 PF00460 Flagella basal body rod protein D3868_30830 PF06429 Flagellar basal body rod FlgEFG protein C-terminal D3868_30835 PF00460 Flagella basal body rod protein D3868_30835 PF06429 Flagellar basal body rod FlgEFG protein C-terminal D3868_30845 PF02119 Flagellar P-ring protein D3868_30865 PF00583 Acetyltransferase (GNAT) family D3868_30870 PF13188 PAS domain D3868_30870 PF03707 Bacterial signalling protein N terminal repeat D3868_30870 PF00990 Diguanylate cyclase, GGDEF domain D3868_30870 PF00563 EAL domain D3868_30875 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family D3868_30875 PF03466 LysR substrate binding domain D3868_30880 PF00111 2Fe-2S iron-sulfur cluster binding domain D3868_30880 PF01799 [2Fe-2S] binding domain D3868_30885 PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase D3868_30905 PF13180 PDZ domain D3868_30905 PF03572 Peptidase family S41 D3868_30910 PF07043 Protein of unknown function (DUF1328) D3868_30920 PF00512 His Kinase A (phospho-acceptor) domain D3868_30920 PF00989 PAS fold D3868_30920 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase D3868_30930 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain D3868_30930 PF00205 Thiamine pyrophosphate enzyme, central domain D3868_30930 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain D3868_30940 PF01037 Lrp/AsnC ligand binding domain D3868_30950 PF01312 FlhB HrpN YscU SpaS Family D3868_30955 PF01311 Bacterial export proteins, family 1 D3868_30960 PF00771 FHIPEP family D3868_30970 PF01313 Bacterial export proteins, family 3 D3868_30975 PF02049 Flagellar hook-basal body complex protein FliE D3868_30980 PF06429 Flagellar basal body rod FlgEFG protein C-terminal D3868_30980 PF00460 Flagella basal body rod protein D3868_30985 PF00460 Flagella basal body rod protein D3868_30990 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain D3868_30990 PF02874 ATP synthase alpha/beta family, beta-barrel domain D3868_30990 PF18269 T3SS EscN ATPase C-terminal domain D3868_31000 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family D3868_31000 PF03466 LysR substrate binding domain D3868_31005 PF07690 Major Facilitator Superfamily D3868_31025 PF07378 Flagellar protein FlbT D3868_31035 PF00669 Bacterial flagellin N-terminal helical region D3868_31035 PF00700 Bacterial flagellin C-terminal helical region D3868_31040 PF00072 Response regulator receiver domain D3868_31040 PF00486 Transcriptional regulatory protein, C terminal D3868_31060 PF00294 pfkB family carbohydrate kinase D3868_31065 PF00392 Bacterial regulatory proteins, gntR family D3868_31065 PF07729 FCD domain D3868_31070 PF01081 KDPG and KHG aldolase D3868_31080 PF00174 Oxidoreductase molybdopterin binding domain D3868_31085 PF01794 Ferric reductase like transmembrane component D3868_31090 PF00005 ABC transporter D3868_31115 PF02222 ATP-grasp domain D3868_31125 PF00510 Cytochrome c oxidase subunit III D3868_31130 PF02515 CoA-transferase family III D3868_31140 PF03466 LysR substrate binding domain D3868_31140 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family D3868_31145 PF02770 Acyl-CoA dehydrogenase, middle domain D3868_31145 PF02771 Acyl-CoA dehydrogenase, N-terminal domain D3868_31145 PF00441 Acyl-CoA dehydrogenase, C-terminal domain D3868_31150 PF16078 2-oxoglutarate dehydrogenase N-terminus D3868_31150 PF00676 Dehydrogenase E1 component D3868_31150 PF16870 2-oxoglutarate dehydrogenase C-terminal D3868_31150 PF02779 Transketolase, pyrimidine binding domain D3868_31155 PF03480 Bacterial extracellular solute-binding protein, family 7 D3868_31165 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component D3868_31170 PF02558 Ketopantoate reductase PanE/ApbA D3868_31170 PF08546 Ketopantoate reductase PanE/ApbA C terminal D3868_31180 PF00171 Aldehyde dehydrogenase family D3868_31185 PF02913 FAD linked oxidases, C-terminal domain D3868_31185 PF01565 FAD binding domain D3868_31190 PF01012 Electron transfer flavoprotein domain D3868_31195 PF01012 Electron transfer flavoprotein domain D3868_31195 PF00766 Electron transfer flavoprotein FAD-binding domain D3868_31215 PF01425 Amidase D3868_31225 PF03450 CO dehydrogenase flavoprotein C-terminal domain D3868_31225 PF00941 FAD binding domain in molybdopterin dehydrogenase D3868_31230 PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase D3868_31230 PF01315 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain D3868_31235 PF00005 ABC transporter D3868_31240 PF12399 Branched-chain amino acid ATP-binding cassette transporter D3868_31240 PF00005 ABC transporter D3868_31250 PF02653 Branched-chain amino acid transport system / permease component D3868_31275 PF01979 Amidohydrolase family D3868_31295 PF13458 Periplasmic binding protein D3868_31300 PF02653 Branched-chain amino acid transport system / permease component D3868_31305 PF02653 Branched-chain amino acid transport system / permease component D3868_31305 PF11862 Domain of unknown function (DUF3382) D3868_31310 PF12399 Branched-chain amino acid ATP-binding cassette transporter D3868_31310 PF00005 ABC transporter D3868_31315 PF00005 ABC transporter D3868_31320 PF01494 FAD binding domain D3868_31325 PF17645 Arylmalonate decarboxylase D3868_31330 PF00561 alpha/beta hydrolase fold D3868_31340 PF00857 Isochorismatase family D3868_31350 PF00356 Bacterial regulatory proteins, lacI family D3868_31355 PF00381 PTS HPr component phosphorylation site D3868_31355 PF00391 PEP-utilising enzyme, mobile domain D3868_31355 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 D3868_31355 PF02896 PEP-utilising enzyme, TIM barrel domain D3868_31355 PF05524 PEP-utilising enzyme, N-terminal D3868_31360 PF00294 pfkB family carbohydrate kinase D3868_31365 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit D3868_31375 PF13426 PAS domain D3868_31375 PF07568 Histidine kinase D3868_31375 PF13581 Histidine kinase-like ATPase domain D3868_31380 PF00072 Response regulator receiver domain D3868_31380 PF00196 Bacterial regulatory proteins, luxR family D3868_31410 PF03466 LysR substrate binding domain D3868_31410 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family D3868_31415 PF00144 Beta-lactamase D3868_31425 PF01266 FAD dependent oxidoreductase D3868_31440 PF00005 ABC transporter D3868_31445 PF00005 ABC transporter D3868_31445 PF12399 Branched-chain amino acid ATP-binding cassette transporter D3868_31450 PF02653 Branched-chain amino acid transport system / permease component D3868_31450 PF11862 Domain of unknown function (DUF3382) D3868_31455 PF02653 Branched-chain amino acid transport system / permease component D3868_31470 PF00291 Pyridoxal-phosphate dependent enzyme D3868_31475 PF01042 Endoribonuclease L-PSP D3868_31480 PF01037 Lrp/AsnC ligand binding domain D3868_31490 PF01614 Bacterial transcriptional regulator D3868_31490 PF09339 IclR helix-turn-helix domain D3868_31495 PF01515 Phosphate acetyl/butaryl transferase D3868_31515 PF00171 Aldehyde dehydrogenase family D3868_31520 PF00549 CoA-ligase D3868_31520 PF08442 ATP-grasp domain D3868_31525 PF02629 CoA binding domain D3868_31525 PF00549 CoA-ligase D3868_31530 PF04879 Molybdopterin oxidoreductase Fe4S4 domain D3868_31530 PF01568 Molydopterin dinucleotide binding domain D3868_31530 PF00384 Molybdopterin oxidoreductase D3868_31535 PF13247 4Fe-4S dicluster domain D3868_31535 PF12800 4Fe-4S binding domain D3868_31550 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain D3868_31550 PF00205 Thiamine pyrophosphate enzyme, central domain D3868_31550 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain D3868_31555 PF17762 HTH domain found in ParB protein D3868_31555 PF02195 ParB-like nuclease domain D3868_31560 PF13614 AAA domain D3868_31580 PF13419 Haloacid dehalogenase-like hydrolase D3868_31595 PF03601 Conserved hypothetical protein 698 D3868_31625 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase D3868_31625 PF00512 His Kinase A (phospho-acceptor) domain D3868_31625 PF00989 PAS fold D3868_31635 PF06745 KaiC D3868_31640 PF13426 PAS domain D3868_31640 PF00072 Response regulator receiver domain D3868_31640 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase D3868_31665 PF00171 Aldehyde dehydrogenase family D3868_31670 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain D3868_31670 PF00205 Thiamine pyrophosphate enzyme, central domain D3868_31670 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain D3868_31675 PF03466 LysR substrate binding domain D3868_31675 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family D3868_31680 PF12419 SNF2 Helicase protein D3868_31680 PF00271 Helicase conserved C-terminal domain D3868_31680 PF00176 SNF2 family N-terminal domain D3868_31685 PF00873 AcrB/AcrD/AcrF family D3868_31700 PF00106 short chain dehydrogenase D3868_31730 PF00109 Beta-ketoacyl synthase, N-terminal domain D3868_31730 PF02801 Beta-ketoacyl synthase, C-terminal domain D3868_31735 PF02801 Beta-ketoacyl synthase, C-terminal domain D3868_31735 PF00109 Beta-ketoacyl synthase, N-terminal domain D3868_31740 PF00106 short chain dehydrogenase D3868_31755 PF12802 MarR family D3868_31785 PF00171 Aldehyde dehydrogenase family D3868_31785 PF00465 Iron-containing alcohol dehydrogenase D3868_31790 PF01590 GAF domain D3868_31790 PF02954 Bacterial regulatory protein, Fis family D3868_31790 PF00158 Sigma-54 interaction domain D3868_31855 PF07690 Major Facilitator Superfamily D3868_31860 PF00691 OmpA family D3868_31860 PF13677 Membrane MotB of proton-channel complex MotA/MotB D3868_31865 PF01618 MotA/TolQ/ExbB proton channel family D3868_31875 PF00460 Flagella basal body rod protein D3868_31875 PF06429 Flagellar basal body rod FlgEFG protein C-terminal D3868_31880 PF06429 Flagellar basal body rod FlgEFG protein C-terminal D3868_31880 PF00460 Flagella basal body rod protein D3868_31885 PF13144 Chaperone for flagella basal body P-ring formation D3868_31890 PF02107 Flagellar L-ring protein D3868_31910 PF04879 Molybdopterin oxidoreductase Fe4S4 domain D3868_31910 PF01568 Molydopterin dinucleotide binding domain D3868_31910 PF00384 Molybdopterin oxidoreductase D3868_31915 PF03892 Nitrate reductase cytochrome c-type subunit (NapB) D3868_31920 PF03264 NapC/NirT cytochrome c family, N-terminal region D3868_31955 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term D3868_31955 PF02154 Flagellar motor switch protein FliM D3868_31975 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term D3868_32020 PF00005 ABC transporter D3868_32050 PF01370 NAD dependent epimerase/dehydratase family D3868_32055 PF13439 Glycosyltransferase Family 4 D3868_32055 PF00534 Glycosyl transferases group 1 D3868_32060 PF00535 Glycosyl transferase family 2 D3868_32070 PF00535 Glycosyl transferase family 2 D3868_32090 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain D3868_32090 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain D3868_32090 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain D3868_32110 PF00534 Glycosyl transferases group 1 D3868_32110 PF13439 Glycosyltransferase Family 4 D3868_32115 PF00535 Glycosyl transferase family 2 D3868_32125 PF13439 Glycosyltransferase Family 4 D3868_32150 PF00733 Asparagine synthase D3868_32150 PF13537 Glutamine amidotransferase domain D3868_32175 PF16363 GDP-mannose 4,6 dehydratase D3868_32200 PF00696 Amino acid kinase family D3868_32205 PF00696 Amino acid kinase family D3868_32225 PF00293 NUDIX domain D3868_32235 PF01970 Tripartite tricarboxylate transporter TctA family D3868_32240 PF03737 Aldolase/RraA D3868_32250 PF02719 Polysaccharide biosynthesis protein D3868_32255 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family D3868_32265 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain D3868_32265 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain D3868_32265 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain D3868_32270 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II D3868_32270 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III D3868_32270 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain D3868_32270 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I D3868_32275 PF02195 ParB-like nuclease domain D3868_32275 PF17762 HTH domain found in ParB protein D3868_32280 PF13614 AAA domain D3868_32315 PF01370 NAD dependent epimerase/dehydratase family D3868_32320 PF00009 Elongation factor Tu GTP binding domain D3868_32325 PF01507 Phosphoadenosine phosphosulfate reductase family D3868_32355 PF00535 Glycosyl transferase family 2 D3868_32360 PF00534 Glycosyl transferases group 1 D3868_32360 PF13439 Glycosyltransferase Family 4 D3868_32365 PF00534 Glycosyl transferases group 1 D3868_32365 PF08323 Starch synthase catalytic domain D3868_32370 PF00535 Glycosyl transferase family 2 D3868_32375 PF00483 Nucleotidyl transferase D3868_32375 PF01050 Mannose-6-phosphate isomerase D3868_32425 PF05045 Rhamnan synthesis protein F D3868_32425 PF14307 Glycosyltransferase WbsX D3868_32430 PF16363 GDP-mannose 4,6 dehydratase D3868_32435 PF16363 GDP-mannose 4,6 dehydratase D3868_32440 PF01061 ABC-2 type transporter D3868_32445 PF00005 ABC transporter D3868_32450 PF01370 NAD dependent epimerase/dehydratase family D3868_32460 PF03412 Peptidase C39 family D3868_32460 PF00005 ABC transporter D3868_32460 PF00664 ABC transporter transmembrane region D3868_32475 PF00483 Nucleotidyl transferase D3868_32480 PF04321 RmlD substrate binding domain D3868_32485 PF16363 GDP-mannose 4,6 dehydratase D3868_32490 PF00908 dTDP-4-dehydrorhamnose 3,5-epimerase D3868_32495 PF13439 Glycosyltransferase Family 4 D3868_32495 PF00534 Glycosyl transferases group 1 D3868_32500 PF08548 Peptidase M10 serralysin C terminal D3868_32500 PF00353 RTX calcium-binding nonapeptide repeat (4 copies) D3868_32505 PF01266 FAD dependent oxidoreductase D3868_32510 PF13580 SIS domain D3868_32515 PF10119 Predicted methyltransferase regulatory domain D3868_32515 PF13847 Methyltransferase domain D3868_32520 PF00534 Glycosyl transferases group 1 D3868_32520 PF13439 Glycosyltransferase Family 4 D3868_32555 PF00005 ABC transporter