locus-tag class description TSH58p_00040 PF00072 Response regulator receiver domain TSH58p_00045 PF00072 Response regulator receiver domain TSH58p_00050 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) TSH58p_00050 PF00072 Response regulator receiver domain TSH58p_00050 PF01627 Hpt domain TSH58p_00050 PF00512 His Kinase A (phospho-acceptor) domain TSH58p_00050 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase TSH58p_00050 PF00672 HAMP domain TSH58p_00055 PF00497 Bacterial extracellular solute-binding proteins, family 3 TSH58p_00060 PF00497 Bacterial extracellular solute-binding proteins, family 3 TSH58p_00065 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain TSH58p_00065 PF08447 PAS fold TSH58p_00065 PF13426 PAS domain TSH58p_00085 PF00672 HAMP domain TSH58p_00085 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain TSH58p_00100 PF00208 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase TSH58p_00100 PF02812 Glu/Leu/Phe/Val dehydrogenase, dimerisation domain TSH58p_00105 PF00512 His Kinase A (phospho-acceptor) domain TSH58p_00105 PF00989 PAS fold TSH58p_00105 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase TSH58p_00110 PF00072 Response regulator receiver domain TSH58p_00110 PF00196 Bacterial regulatory proteins, luxR family TSH58p_00115 PF03544 Gram-negative bacterial TonB protein C-terminal TSH58p_00120 PF02472 Biopolymer transport protein ExbD/TolR TSH58p_00125 PF01618 MotA/TolQ/ExbB proton channel family TSH58p_00145 PF00353 RTX calcium-binding nonapeptide repeat (4 copies) TSH58p_00145 PF00413 Matrixin TSH58p_00145 PF08548 Peptidase M10 serralysin C terminal TSH58p_00160 PF07694 5TMR of 5TMR-LYT TSH58p_00160 PF06580 Histidine kinase TSH58p_00165 PF00072 Response regulator receiver domain TSH58p_00165 PF04397 LytTr DNA-binding domain TSH58p_00175 PF02554 Carbon starvation protein CstA TSH58p_00175 PF13722 5TM C-terminal transporter carbon starvation CstA TSH58p_00190 PF05343 M42 glutamyl aminopeptidase TSH58p_00195 PF18419 ATP-grasp-like domain TSH58p_00195 PF04262 Glutamate-cysteine ligase TSH58p_00195 PF02655 ATP-grasp domain TSH58p_00200 PF00733 Asparagine synthase TSH58p_00200 PF13537 Glutamine amidotransferase domain TSH58p_00210 PF00392 Bacterial regulatory proteins, gntR family TSH58p_00210 PF00155 Aminotransferase class I and II TSH58p_00230 PF03466 LysR substrate binding domain TSH58p_00230 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family TSH58p_00235 PF00202 Aminotransferase class-III TSH58p_00240 PF00171 Aldehyde dehydrogenase family TSH58p_00245 PF00392 Bacterial regulatory proteins, gntR family TSH58p_00245 PF07729 FCD domain TSH58p_00250 PF00571 CBS domain TSH58p_00250 PF03448 MgtE intracellular N domain TSH58p_00250 PF01769 Divalent cation transporter TSH58p_00260 PF03741 Integral membrane protein TerC family TSH58p_00265 PF01970 Tripartite tricarboxylate transporter TctA family TSH58p_00315 PF00534 Glycosyl transferases group 1 TSH58p_00315 PF13439 Glycosyltransferase Family 4 TSH58p_00330 PF08241 Methyltransferase domain TSH58p_00350 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion TSH58p_00350 PF00529 HlyD membrane-fusion protein of T1SS TSH58p_00355 PF00005 ABC transporter TSH58p_00355 PF00664 ABC transporter transmembrane region TSH58p_00365 PF16363 GDP-mannose 4,6 dehydratase TSH58p_00370 PF12802 MarR family TSH58p_00380 PF08361 MAATS-type transcriptional repressor, C-terminal region TSH58p_00380 PF00440 Bacterial regulatory proteins, tetR family TSH58p_00385 PF00501 AMP-binding enzyme TSH58p_00385 PF13193 AMP-binding enzyme C-terminal domain TSH58p_00390 PF07729 FCD domain TSH58p_00390 PF00392 Bacterial regulatory proteins, gntR family TSH58p_00395 PF02771 Acyl-CoA dehydrogenase, N-terminal domain TSH58p_00395 PF02770 Acyl-CoA dehydrogenase, middle domain TSH58p_00395 PF00441 Acyl-CoA dehydrogenase, C-terminal domain TSH58p_00400 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase TSH58p_00400 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase TSH58p_00405 PF00501 AMP-binding enzyme TSH58p_00405 PF13193 AMP-binding enzyme C-terminal domain TSH58p_00410 PF12399 Branched-chain amino acid ATP-binding cassette transporter TSH58p_00410 PF00005 ABC transporter TSH58p_00415 PF00501 AMP-binding enzyme TSH58p_00420 PF02653 Branched-chain amino acid transport system / permease component TSH58p_00435 PF00005 ABC transporter TSH58p_00440 PF13193 AMP-binding enzyme C-terminal domain TSH58p_00440 PF00501 AMP-binding enzyme TSH58p_00445 PF00171 Aldehyde dehydrogenase family TSH58p_00450 PF02771 Acyl-CoA dehydrogenase, N-terminal domain TSH58p_00450 PF02770 Acyl-CoA dehydrogenase, middle domain TSH58p_00450 PF00441 Acyl-CoA dehydrogenase, C-terminal domain TSH58p_00455 PF00108 Thiolase, N-terminal domain TSH58p_00455 PF02803 Thiolase, C-terminal domain TSH58p_00460 PF00441 Acyl-CoA dehydrogenase, C-terminal domain TSH58p_00460 PF02771 Acyl-CoA dehydrogenase, N-terminal domain TSH58p_00460 PF02770 Acyl-CoA dehydrogenase, middle domain TSH58p_00465 PF01039 Carboxyl transferase domain TSH58p_00470 PF00378 Enoyl-CoA hydratase/isomerase TSH58p_00475 PF02785 Biotin carboxylase C-terminal domain TSH58p_00475 PF00289 Biotin carboxylase, N-terminal domain TSH58p_00475 PF00364 Biotin-requiring enzyme TSH58p_00475 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain TSH58p_00480 PF00682 HMGL-like TSH58p_00495 PF00106 short chain dehydrogenase TSH58p_00505 PF00756 Putative esterase TSH58p_00510 PF01596 O-methyltransferase TSH58p_00520 PF05443 ROS/MUCR transcriptional regulator protein TSH58p_00525 PF00232 Glycosyl hydrolase family 1 TSH58p_00530 PF00232 Glycosyl hydrolase family 1 TSH58p_00535 PF04055 Radical SAM superfamily TSH58p_00535 PF06463 Molybdenum Cofactor Synthesis C TSH58p_00545 PF06472 ABC transporter transmembrane region 2 TSH58p_00545 PF00005 ABC transporter TSH58p_00555 PF01501 Glycosyl transferase family 8 TSH58p_00555 PF00535 Glycosyl transferase family 2 TSH58p_00565 PF00232 Glycosyl hydrolase family 1 TSH58p_00570 PF02056 Family 4 glycosyl hydrolase TSH58p_00570 PF11975 Family 4 glycosyl hydrolase C-terminal domain TSH58p_00580 PF11154 Protein of unknown function (DUF2934) TSH58p_00580 PF00430 ATP synthase B/B' CF(0) TSH58p_00600 PF01546 Peptidase family M20/M25/M40 TSH58p_00600 PF07687 Peptidase dimerisation domain TSH58p_00610 PF07568 Histidine kinase TSH58p_00610 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase TSH58p_00610 PF12282 Signal transduction histidine kinase TSH58p_00615 PF00072 Response regulator receiver domain TSH58p_00615 PF00196 Bacterial regulatory proteins, luxR family TSH58p_00625 PF07194 P2 response regulator binding domain TSH58p_00625 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase TSH58p_00625 PF01584 CheW-like domain TSH58p_00625 PF02895 Signal transducing histidine kinase, homodimeric domain TSH58p_00625 PF01627 Hpt domain TSH58p_00630 PF00072 Response regulator receiver domain TSH58p_00630 PF00990 Diguanylate cyclase, GGDEF domain TSH58p_00635 PF03705 CheR methyltransferase, all-alpha domain TSH58p_00635 PF01739 CheR methyltransferase, SAM binding domain TSH58p_00640 PF03130 PBS lyase HEAT-like repeat TSH58p_00645 PF01339 CheB methylesterase TSH58p_00645 PF00072 Response regulator receiver domain TSH58p_00650 PF01584 CheW-like domain TSH58p_00655 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain TSH58p_00665 PF00072 Response regulator receiver domain TSH58p_00670 PF01914 MarC family integral membrane protein TSH58p_00680 PF00285 Citrate synthase, C-terminal domain TSH58p_00700 PF02782 FGGY family of carbohydrate kinases, C-terminal domain TSH58p_00700 PF00370 FGGY family of carbohydrate kinases, N-terminal domain TSH58p_00715 PF00528 Binding-protein-dependent transport system inner membrane component TSH58p_00720 PF00528 Binding-protein-dependent transport system inner membrane component TSH58p_00725 PF00005 ABC transporter TSH58p_00725 PF17912 MalK OB fold domain TSH58p_00730 PF08402 TOBE domain TSH58p_00730 PF00005 ABC transporter TSH58p_00735 PF16901 C-terminal domain of alpha-glycerophosphate oxidase TSH58p_00735 PF01266 FAD dependent oxidoreductase TSH58p_00740 PF09335 SNARE associated Golgi protein TSH58p_00750 PF00975 Thioesterase domain TSH58p_00750 PF00550 Phosphopantetheine attachment site TSH58p_00750 PF13193 AMP-binding enzyme C-terminal domain TSH58p_00750 PF00501 AMP-binding enzyme TSH58p_00750 PF00668 Condensation domain TSH58p_00760 PF00005 ABC transporter TSH58p_00765 PF00005 ABC transporter TSH58p_00765 PF00664 ABC transporter transmembrane region TSH58p_00770 PF00975 Thioesterase domain TSH58p_00790 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain TSH58p_00790 PF00672 HAMP domain TSH58p_00790 PF12729 Four helix bundle sensory module for signal transduction TSH58p_00795 PF02743 Cache domain TSH58p_00795 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain TSH58p_00795 PF00672 HAMP domain TSH58p_00805 PF00034 Cytochrome c TSH58p_00820 PF00072 Response regulator receiver domain TSH58p_00820 PF00196 Bacterial regulatory proteins, luxR family TSH58p_00825 PF09308 LuxQ, periplasmic TSH58p_00825 PF00512 His Kinase A (phospho-acceptor) domain TSH58p_00825 PF00072 Response regulator receiver domain TSH58p_00825 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase TSH58p_00830 PF00072 Response regulator receiver domain TSH58p_00830 PF13426 PAS domain TSH58p_00830 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase TSH58p_00840 PF00106 short chain dehydrogenase TSH58p_00860 PF00512 His Kinase A (phospho-acceptor) domain TSH58p_00860 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase TSH58p_00880 PF00924 Mechanosensitive ion channel TSH58p_00955 PF00441 Acyl-CoA dehydrogenase, C-terminal domain TSH58p_00955 PF02770 Acyl-CoA dehydrogenase, middle domain TSH58p_00955 PF02771 Acyl-CoA dehydrogenase, N-terminal domain TSH58p_00960 PF00550 Phosphopantetheine attachment site TSH58p_00965 PF02566 OsmC-like protein TSH58p_00990 PF00378 Enoyl-CoA hydratase/isomerase TSH58p_00995 PF08402 TOBE domain TSH58p_00995 PF00005 ABC transporter TSH58p_01000 PF00528 Binding-protein-dependent transport system inner membrane component TSH58p_01030 PF02515 CoA-transferase family III TSH58p_01035 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family TSH58p_01035 PF03466 LysR substrate binding domain TSH58p_01065 PF03167 Uracil DNA glycosylase superfamily TSH58p_01085 PF13360 PQQ-like domain TSH58p_01090 PF13442 Cytochrome C oxidase, cbb3-type, subunit III TSH58p_01130 PF04476 4-HFC-P synthase TSH58p_01150 PF00005 ABC transporter TSH58p_01170 PF02741 FTR, proximal lobe TSH58p_01170 PF01913 Formylmethanofuran-tetrahydromethanopterin formyltransferase TSH58p_01175 PF07969 Amidohydrolase family TSH58p_01185 PF01329 Pterin 4 alpha carbinolamine dehydratase TSH58p_01195 PF09176 Methylene-tetrahydromethanopterin dehydrogenase, N-terminal TSH58p_01205 PF02289 Cyclohydrolase (MCH) TSH58p_01210 PF08443 RimK-like ATP-grasp domain TSH58p_01210 PF18030 RimK PreATP-grasp domain TSH58p_01220 PF08714 Formaldehyde-activating enzyme (Fae) TSH58p_01270 PF00561 alpha/beta hydrolase fold TSH58p_01275 PF00072 Response regulator receiver domain TSH58p_01275 PF00196 Bacterial regulatory proteins, luxR family TSH58p_01280 PF13493 Domain of unknown function (DUF4118) TSH58p_01280 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase TSH58p_01280 PF00512 His Kinase A (phospho-acceptor) domain TSH58p_01280 PF00989 PAS fold TSH58p_01280 PF08447 PAS fold TSH58p_01280 PF13426 PAS domain TSH58p_01285 PF03793 PASTA domain TSH58p_01285 PF00069 Protein kinase domain TSH58p_01290 PF07992 Pyridine nucleotide-disulphide oxidoreductase TSH58p_01290 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain TSH58p_01310 PF12833 Helix-turn-helix domain TSH58p_01325 PF00005 ABC transporter TSH58p_01330 PF12399 Branched-chain amino acid ATP-binding cassette transporter TSH58p_01330 PF00005 ABC transporter TSH58p_01335 PF02653 Branched-chain amino acid transport system / permease component TSH58p_01340 PF13458 Periplasmic binding protein TSH58p_01345 PF00378 Enoyl-CoA hydratase/isomerase TSH58p_01350 PF01575 MaoC like domain TSH58p_01365 PF00108 Thiolase, N-terminal domain TSH58p_01365 PF02803 Thiolase, C-terminal domain TSH58p_01375 PF00465 Iron-containing alcohol dehydrogenase TSH58p_01380 PF00005 ABC transporter TSH58p_01385 PF00005 ABC transporter TSH58p_01385 PF12399 Branched-chain amino acid ATP-binding cassette transporter TSH58p_01390 PF02653 Branched-chain amino acid transport system / permease component TSH58p_01395 PF13458 Periplasmic binding protein TSH58p_01400 PF00676 Dehydrogenase E1 component TSH58p_01405 PF00364 Biotin-requiring enzyme TSH58p_01405 PF02780 Transketolase, C-terminal domain TSH58p_01405 PF02779 Transketolase, pyrimidine binding domain TSH58p_01410 PF00378 Enoyl-CoA hydratase/isomerase TSH58p_01415 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) TSH58p_01415 PF00364 Biotin-requiring enzyme TSH58p_01415 PF02817 e3 binding domain TSH58p_01420 PF02771 Acyl-CoA dehydrogenase, N-terminal domain TSH58p_01420 PF02770 Acyl-CoA dehydrogenase, middle domain TSH58p_01420 PF00441 Acyl-CoA dehydrogenase, C-terminal domain TSH58p_01425 PF00501 AMP-binding enzyme TSH58p_01425 PF13193 AMP-binding enzyme C-terminal domain TSH58p_01440 PF03411 Penicillin-insensitive murein endopeptidase TSH58p_01445 PF04542 Sigma-70 region 2 TSH58p_01445 PF08281 Sigma-70, region 4 TSH58p_01450 PF04773 FecR protein TSH58p_01450 PF16220 Domain of unknown function (DUF4880) TSH58p_01455 PF00593 TonB dependent receptor TSH58p_01455 PF07715 TonB-dependent Receptor Plug Domain TSH58p_01460 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion TSH58p_01465 PF12704 MacB-like periplasmic core domain TSH58p_01465 PF02687 FtsX-like permease family TSH58p_01465 PF00005 ABC transporter TSH58p_01480 PF00005 ABC transporter TSH58p_01485 PF01297 Zinc-uptake complex component A periplasmic TSH58p_01510 PF00528 Binding-protein-dependent transport system inner membrane component TSH58p_01530 PF01546 Peptidase family M20/M25/M40 TSH58p_01530 PF07687 Peptidase dimerisation domain TSH58p_01535 PF07883 Cupin domain TSH58p_01535 PF01381 Helix-turn-helix TSH58p_01540 PF03480 Bacterial extracellular solute-binding protein, family 7 TSH58p_01545 PF13378 Enolase C-terminal domain-like TSH58p_01545 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain TSH58p_01550 PF04290 Tripartite ATP-independent periplasmic transporters, DctQ component TSH58p_01555 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component TSH58p_01560 PF07729 FCD domain TSH58p_01560 PF00392 Bacterial regulatory proteins, gntR family TSH58p_01565 PF01205 Uncharacterized protein family UPF0029 TSH58p_01575 PF00561 alpha/beta hydrolase fold TSH58p_01590 PF07715 TonB-dependent Receptor Plug Domain TSH58p_01590 PF00593 TonB dependent receptor TSH58p_01600 PF04542 Sigma-70 region 2 TSH58p_01600 PF12680 SnoaL-like domain TSH58p_01600 PF08281 Sigma-70, region 4 TSH58p_01605 PF12464 Maltose acetyltransferase TSH58p_01605 PF14602 Hexapeptide repeat of succinyl-transferase TSH58p_01610 PF02559 CarD-like/TRCF domain TSH58p_01610 PF17757 UvrB interaction domain TSH58p_01610 PF00270 DEAD/DEAH box helicase TSH58p_01610 PF00271 Helicase conserved C-terminal domain TSH58p_01610 PF03461 TRCF domain TSH58p_01635 PF13533 Biotin-lipoyl like TSH58p_01640 PF00873 AcrB/AcrD/AcrF family TSH58p_01650 PF00005 ABC transporter TSH58p_01655 PF01497 Periplasmic binding protein TSH58p_01660 PF01032 FecCD transport family TSH58p_01670 PF07715 TonB-dependent Receptor Plug Domain TSH58p_01670 PF00593 TonB dependent receptor TSH58p_01675 PF13546 DDE superfamily endonuclease TSH58p_01685 PF00872 Transposase, Mutator family TSH58p_01705 PF00589 Phage integrase family TSH58p_01705 PF02899 Phage integrase, N-terminal SAM-like domain TSH58p_01750 PF00378 Enoyl-CoA hydratase/isomerase TSH58p_01760 PF08402 TOBE domain TSH58p_01760 PF00005 ABC transporter TSH58p_01765 PF00528 Binding-protein-dependent transport system inner membrane component TSH58p_01770 PF00501 AMP-binding enzyme TSH58p_01770 PF13193 AMP-binding enzyme C-terminal domain TSH58p_01775 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain TSH58p_01775 PF00672 HAMP domain TSH58p_01785 PF02550 Acetyl-CoA hydrolase/transferase N-terminal domain TSH58p_01785 PF13336 Acetyl-CoA hydrolase/transferase C-terminal domain TSH58p_01790 PF00155 Aminotransferase class I and II TSH58p_01815 PF00497 Bacterial extracellular solute-binding proteins, family 3 TSH58p_01825 PF00005 ABC transporter TSH58p_01840 PF01568 Molydopterin dinucleotide binding domain TSH58p_01840 PF00384 Molybdopterin oxidoreductase TSH58p_01840 PF04879 Molybdopterin oxidoreductase Fe4S4 domain TSH58p_01845 PF03916 Polysulphide reductase, NrfD TSH58p_01850 PF13247 4Fe-4S dicluster domain TSH58p_01860 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family TSH58p_01860 PF03466 LysR substrate binding domain TSH58p_01865 PF00248 Aldo/keto reductase family TSH58p_01875 PF06472 ABC transporter transmembrane region 2 TSH58p_01875 PF00005 ABC transporter TSH58p_01885 PF17762 HTH domain found in ParB protein TSH58p_01885 PF02195 ParB-like nuclease domain TSH58p_01890 PF13614 AAA domain TSH58p_01895 PF01435 Peptidase family M48 TSH58p_01900 PF01566 Natural resistance-associated macrophage protein TSH58p_01900 PF03358 NADPH-dependent FMN reductase TSH58p_01915 PF01261 Xylose isomerase-like TIM barrel TSH58p_01925 PF00535 Glycosyl transferase family 2 TSH58p_01940 PF04932 O-Antigen ligase TSH58p_01945 PF13807 G-rich domain on putative tyrosine kinase TSH58p_01945 PF02706 Chain length determinant protein TSH58p_01945 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain TSH58p_01950 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain TSH58p_01950 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain TSH58p_01950 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain TSH58p_01975 PF00535 Glycosyl transferase family 2 TSH58p_01985 PF01037 Lrp/AsnC ligand binding domain TSH58p_01990 PF14748 Pyrroline-5-carboxylate reductase dimerisation TSH58p_01990 PF03807 NADP oxidoreductase coenzyme F420-dependent TSH58p_01995 PF00171 Aldehyde dehydrogenase family TSH58p_01995 PF01619 Proline dehydrogenase TSH58p_01995 PF14850 DNA-binding domain of Proline dehydrogenase TSH58p_01995 PF18327 Proline utilization A proline dehydrogenase N-terminal domain TSH58p_02035 PF04542 Sigma-70 region 2 TSH58p_02035 PF08281 Sigma-70, region 4 TSH58p_02045 PF01022 Bacterial regulatory protein, arsR family TSH58p_02050 PF00581 Rhodanese-like domain TSH58p_02055 PF00873 AcrB/AcrD/AcrF family TSH58p_02070 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase TSH58p_02070 PF00512 His Kinase A (phospho-acceptor) domain TSH58p_02075 PF00196 Bacterial regulatory proteins, luxR family TSH58p_02075 PF00072 Response regulator receiver domain TSH58p_02080 PF00085 Thioredoxin TSH58p_02095 PF00425 chorismate binding enzyme TSH58p_02095 PF04715 Anthranilate synthase component I, N terminal region TSH58p_02110 PF00571 CBS domain TSH58p_02110 PF02163 Peptidase family M50 TSH58p_02135 PF03466 LysR substrate binding domain TSH58p_02135 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family TSH58p_02140 PF07690 Major Facilitator Superfamily TSH58p_02145 PF00392 Bacterial regulatory proteins, gntR family TSH58p_02145 PF07729 FCD domain TSH58p_02150 PF03480 Bacterial extracellular solute-binding protein, family 7 TSH58p_02155 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component TSH58p_02155 PF04290 Tripartite ATP-independent periplasmic transporters, DctQ component TSH58p_02160 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component TSH58p_02165 PF05661 Protein of unknown function (DUF808) TSH58p_02185 PF00106 short chain dehydrogenase TSH58p_02195 PF01966 HD domain TSH58p_02200 PF00005 ABC transporter TSH58p_02205 PF01061 ABC-2 type transporter TSH58p_02210 PF04828 Glutathione-dependent formaldehyde-activating enzyme TSH58p_02215 PF01425 Amidase TSH58p_02220 PF01425 Amidase TSH58p_02225 PF00857 Isochorismatase family TSH58p_02230 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle TSH58p_02245 PF08352 Oligopeptide/dipeptide transporter, C-terminal region TSH58p_02245 PF00005 ABC transporter TSH58p_02250 PF08352 Oligopeptide/dipeptide transporter, C-terminal region TSH58p_02250 PF00005 ABC transporter TSH58p_02255 PF00857 Isochorismatase family TSH58p_02260 PF05145 Transition state regulatory protein AbrB TSH58p_02265 PF00392 Bacterial regulatory proteins, gntR family TSH58p_02265 PF07729 FCD domain TSH58p_02275 PF03814 Potassium-transporting ATPase A subunit TSH58p_02285 PF02669 K+-transporting ATPase, c chain TSH58p_02290 PF13493 Domain of unknown function (DUF4118) TSH58p_02290 PF02702 Osmosensitive K+ channel His kinase sensor domain TSH58p_02290 PF00512 His Kinase A (phospho-acceptor) domain TSH58p_02290 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase TSH58p_02290 PF13492 GAF domain TSH58p_02295 PF00486 Transcriptional regulatory protein, C terminal TSH58p_02295 PF00072 Response regulator receiver domain TSH58p_02300 PF03741 Integral membrane protein TerC family TSH58p_02305 PF00211 Adenylate and Guanylate cyclase catalytic domain TSH58p_02315 PF04264 YceI-like domain TSH58p_02335 PF00196 Bacterial regulatory proteins, luxR family TSH58p_02335 PF00072 Response regulator receiver domain TSH58p_02340 PF00072 Response regulator receiver domain TSH58p_02340 PF00196 Bacterial regulatory proteins, luxR family TSH58p_02345 PF00989 PAS fold TSH58p_02345 PF00512 His Kinase A (phospho-acceptor) domain TSH58p_02345 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase TSH58p_02355 PF02321 Outer membrane efflux protein TSH58p_02360 PF00873 AcrB/AcrD/AcrF family TSH58p_02365 PF00873 AcrB/AcrD/AcrF family TSH58p_02370 PF13533 Biotin-lipoyl like TSH58p_02380 PF05962 HutD TSH58p_02385 PF01432 Peptidase family M3 TSH58p_02390 PF00571 CBS domain TSH58p_02390 PF00005 ABC transporter TSH58p_02395 PF00528 Binding-protein-dependent transport system inner membrane component TSH58p_02400 PF04069 Substrate binding domain of ABC-type glycine betaine transport system TSH58p_02405 PF01627 Hpt domain TSH58p_02405 PF00512 His Kinase A (phospho-acceptor) domain TSH58p_02405 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase TSH58p_02405 PF00672 HAMP domain TSH58p_02405 PF00072 Response regulator receiver domain TSH58p_02405 PF17149 Periplasmic sensor domain found in signal transduction proteins TSH58p_02410 PF00072 Response regulator receiver domain TSH58p_02420 PF02566 OsmC-like protein TSH58p_02425 PF01047 MarR family TSH58p_02445 PF03480 Bacterial extracellular solute-binding protein, family 7 TSH58p_02450 PF00211 Adenylate and Guanylate cyclase catalytic domain TSH58p_02450 PF00672 HAMP domain TSH58p_02450 PF02743 Cache domain TSH58p_02470 PF01168 Alanine racemase, N-terminal domain TSH58p_02470 PF00842 Alanine racemase, C-terminal domain TSH58p_02520 PF02386 Cation transport protein TSH58p_02525 PF03706 Lysylphosphatidylglycerol synthase TM region TSH58p_02535 PF02028 BCCT, betaine/carnitine/choline family transporter TSH58p_02540 PF00990 Diguanylate cyclase, GGDEF domain TSH58p_02540 PF00563 EAL domain TSH58p_02540 PF08447 PAS fold TSH58p_02540 PF08448 PAS fold TSH58p_02550 PF00300 Histidine phosphatase superfamily (branch 1) TSH58p_02550 PF13456 Reverse transcriptase-like TSH58p_02555 PF01256 Carbohydrate kinase TSH58p_02570 PF00083 Sugar (and other) transporter TSH58p_02570 PF07690 Major Facilitator Superfamily TSH58p_02575 PF00116 Cytochrome C oxidase subunit II, periplasmic domain TSH58p_02575 PF06481 COX Aromatic Rich Motif TSH58p_02580 PF00115 Cytochrome C and Quinol oxidase polypeptide I TSH58p_02585 PF00510 Cytochrome c oxidase subunit III TSH58p_02590 PF03626 Prokaryotic Cytochrome C oxidase subunit IV TSH58p_02600 PF00512 His Kinase A (phospho-acceptor) domain TSH58p_02600 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase TSH58p_02605 PF00072 Response regulator receiver domain TSH58p_02615 PF00216 Bacterial DNA-binding protein TSH58p_02620 PF03264 NapC/NirT cytochrome c family, N-terminal region TSH58p_02625 PF03892 Nitrate reductase cytochrome c-type subunit (NapB) TSH58p_02630 PF00384 Molybdopterin oxidoreductase TSH58p_02630 PF01568 Molydopterin dinucleotide binding domain TSH58p_02630 PF04879 Molybdopterin oxidoreductase Fe4S4 domain TSH58p_02645 PF06796 Periplasmic nitrate reductase protein NapE TSH58p_02650 PF07690 Major Facilitator Superfamily TSH58p_02660 PF01027 Inhibitor of apoptosis-promoting Bax1 TSH58p_02670 PF04542 Sigma-70 region 2 TSH58p_02670 PF08281 Sigma-70, region 4 TSH58p_02675 PF00216 Bacterial DNA-binding protein TSH58p_02685 PF02954 Bacterial regulatory protein, Fis family TSH58p_02685 PF00072 Response regulator receiver domain TSH58p_02685 PF00158 Sigma-54 interaction domain TSH58p_02690 PF00325 Bacterial regulatory proteins, crp family TSH58p_02690 PF00027 Cyclic nucleotide-binding domain TSH58p_02695 PF07005 Sugar-binding N-terminal domain TSH58p_02695 PF17042 Nucleotide-binding C-terminal domain TSH58p_02700 PF02788 Ribulose bisphosphate carboxylase large chain, N-terminal domain TSH58p_02700 PF00016 Ribulose bisphosphate carboxylase large chain, catalytic domain TSH58p_02710 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component TSH58p_02715 PF03480 Bacterial extracellular solute-binding protein, family 7 TSH58p_02720 PF00356 Bacterial regulatory proteins, lacI family TSH58p_02730 PF05853 beta-keto acid cleavage enzyme TSH58p_02735 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain TSH58p_02735 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain TSH58p_02740 PF00850 Histone deacetylase domain TSH58p_02745 PF07687 Peptidase dimerisation domain TSH58p_02745 PF01546 Peptidase family M20/M25/M40 TSH58p_02755 PF00005 ABC transporter TSH58p_02755 PF08352 Oligopeptide/dipeptide transporter, C-terminal region TSH58p_02760 PF00528 Binding-protein-dependent transport system inner membrane component TSH58p_02760 PF12911 N-terminal TM domain of oligopeptide transport permease C TSH58p_02765 PF00528 Binding-protein-dependent transport system inner membrane component TSH58p_02770 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle TSH58p_02775 PF07687 Peptidase dimerisation domain TSH58p_02775 PF01546 Peptidase family M20/M25/M40 TSH58p_02780 PF03466 LysR substrate binding domain TSH58p_02780 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family TSH58p_02795 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family TSH58p_02810 PF13579 Glycosyl transferase 4-like domain TSH58p_02810 PF00534 Glycosyl transferases group 1 TSH58p_02820 PF01408 Oxidoreductase family, NAD-binding Rossmann fold TSH58p_02820 PF02894 Oxidoreductase family, C-terminal alpha/beta domain TSH58p_02825 PF13614 AAA domain TSH58p_02825 PF13807 G-rich domain on putative tyrosine kinase TSH58p_02825 PF02706 Chain length determinant protein TSH58p_02830 PF01370 NAD dependent epimerase/dehydratase family TSH58p_02835 PF02397 Bacterial sugar transferase TSH58p_02845 PF03808 Glycosyl transferase WecB/TagA/CpsF family TSH58p_02850 PF13439 Glycosyltransferase Family 4 TSH58p_02850 PF00534 Glycosyl transferases group 1 TSH58p_02855 PF16363 GDP-mannose 4,6 dehydratase TSH58p_02860 PF16363 GDP-mannose 4,6 dehydratase TSH58p_02865 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain TSH58p_02865 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain TSH58p_02865 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain TSH58p_02875 PF00072 Response regulator receiver domain TSH58p_02875 PF00196 Bacterial regulatory proteins, luxR family TSH58p_02880 PF00072 Response regulator receiver domain TSH58p_02880 PF00196 Bacterial regulatory proteins, luxR family TSH58p_02885 PF00072 Response regulator receiver domain TSH58p_02885 PF00196 Bacterial regulatory proteins, luxR family TSH58p_02895 PF00723 Glycosyl hydrolases family 15 TSH58p_02910 PF07521 Zn-dependent metallo-hydrolase RNA specificity domain TSH58p_02910 PF17770 Ribonuclease J C-terminal domain TSH58p_02910 PF12706 Beta-lactamase superfamily domain TSH58p_02925 PF01209 ubiE/COQ5 methyltransferase family TSH58p_02940 PF00072 Response regulator receiver domain TSH58p_02940 PF09308 LuxQ, periplasmic TSH58p_02940 PF00512 His Kinase A (phospho-acceptor) domain TSH58p_02940 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase TSH58p_02945 PF01425 Amidase TSH58p_02955 PF00576 HIUase/Transthyretin family TSH58p_02960 PF00528 Binding-protein-dependent transport system inner membrane component TSH58p_02965 PF00528 Binding-protein-dependent transport system inner membrane component TSH58p_02970 PF13416 Bacterial extracellular solute-binding protein TSH58p_02975 PF00005 ABC transporter TSH58p_02975 PF08402 TOBE domain TSH58p_03000 PF01425 Amidase TSH58p_03005 PF01979 Amidohydrolase family TSH58p_03015 PF01979 Amidohydrolase family TSH58p_03020 PF00005 ABC transporter TSH58p_03025 PF00528 Binding-protein-dependent transport system inner membrane component TSH58p_03050 PF00384 Molybdopterin oxidoreductase TSH58p_03050 PF04879 Molybdopterin oxidoreductase Fe4S4 domain TSH58p_03050 PF01568 Molydopterin dinucleotide binding domain TSH58p_03055 PF02926 THUMP domain TSH58p_03055 PF10672 S-adenosylmethionine-dependent methyltransferase TSH58p_03055 PF01170 Putative RNA methylase family UPF0020 TSH58p_03070 PF01380 SIS domain TSH58p_03080 PF01757 Acyltransferase family TSH58p_03095 PF00106 short chain dehydrogenase TSH58p_03115 PF17762 HTH domain found in ParB protein TSH58p_03115 PF02195 ParB-like nuclease domain TSH58p_03120 PF13614 AAA domain TSH58p_03125 PF08241 Methyltransferase domain TSH58p_03130 PF01547 Bacterial extracellular solute-binding protein TSH58p_03135 PF00528 Binding-protein-dependent transport system inner membrane component TSH58p_03140 PF00528 Binding-protein-dependent transport system inner membrane component TSH58p_03145 PF00005 ABC transporter TSH58p_03145 PF17912 MalK OB fold domain TSH58p_03150 PF08220 DeoR-like helix-turn-helix domain TSH58p_03150 PF00455 DeoR C terminal sensor domain TSH58p_03160 PF03358 NADPH-dependent FMN reductase TSH58p_03165 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain TSH58p_03165 PF08447 PAS fold TSH58p_03165 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain TSH58p_03165 PF08447 PAS fold TSH58p_03175 PF00005 ABC transporter TSH58p_03180 PF12399 Branched-chain amino acid ATP-binding cassette transporter TSH58p_03180 PF00005 ABC transporter TSH58p_03185 PF02653 Branched-chain amino acid transport system / permease component TSH58p_03185 PF11862 Domain of unknown function (DUF3382) TSH58p_03190 PF02653 Branched-chain amino acid transport system / permease component TSH58p_03205 PF01266 FAD dependent oxidoreductase TSH58p_03210 PF01546 Peptidase family M20/M25/M40 TSH58p_03210 PF07687 Peptidase dimerisation domain TSH58p_03215 PF00440 Bacterial regulatory proteins, tetR family TSH58p_03215 PF17932 Tetracyclin repressor-like, C-terminal domain TSH58p_03220 PF01553 Acyltransferase TSH58p_03220 PF00501 AMP-binding enzyme TSH58p_03225 PF01596 O-methyltransferase TSH58p_03255 PF02659 Putative manganese efflux pump TSH58p_03260 PF17202 Single cache domain 3 TSH58p_03260 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain TSH58p_03260 PF00672 HAMP domain TSH58p_03290 PF00128 Alpha amylase, catalytic domain TSH58p_03295 PF14542 GCN5-related N-acetyl-transferase TSH58p_03305 PF02589 LUD domain TSH58p_03310 PF13183 4Fe-4S dicluster domain TSH58p_03310 PF11870 Domain of unknown function (DUF3390) TSH58p_03310 PF02589 LUD domain TSH58p_03315 PF02754 Cysteine-rich domain TSH58p_03320 PF01565 FAD binding domain TSH58p_03320 PF02913 FAD linked oxidases, C-terminal domain TSH58p_03325 PF02652 L-lactate permease TSH58p_03330 PF00392 Bacterial regulatory proteins, gntR family TSH58p_03330 PF07729 FCD domain TSH58p_03345 PF00004 ATPase family associated with various cellular activities (AAA) TSH58p_03345 PF07724 AAA domain (Cdc48 subfamily) TSH58p_03345 PF02861 Clp amino terminal domain, pathogenicity island component TSH58p_03345 PF17871 AAA lid domain TSH58p_03345 PF10431 C-terminal, D2-small domain, of ClpB protein TSH58p_03350 PF01614 Bacterial transcriptional regulator TSH58p_03350 PF09339 IclR helix-turn-helix domain TSH58p_03355 PF05035 2-keto-3-deoxy-galactonokinase TSH58p_03360 PF01081 KDPG and KHG aldolase TSH58p_03365 PF03401 Tripartite tricarboxylate transporter family receptor TSH58p_03400 PF00072 Response regulator receiver domain TSH58p_03405 PF00072 Response regulator receiver domain TSH58p_03410 PF00512 His Kinase A (phospho-acceptor) domain TSH58p_03410 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) TSH58p_03410 PF01627 Hpt domain TSH58p_03410 PF00072 Response regulator receiver domain TSH58p_03410 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase TSH58p_03410 PF00672 HAMP domain TSH58p_03530 PF02899 Phage integrase, N-terminal SAM-like domain TSH58p_03530 PF00589 Phage integrase family TSH58p_03590 PF01464 Transglycosylase SLT domain TSH58p_03645 PF02954 Bacterial regulatory protein, Fis family TSH58p_03645 PF00072 Response regulator receiver domain TSH58p_03645 PF00158 Sigma-54 interaction domain TSH58p_03715 PF00717 Peptidase S24-like TSH58p_03720 PF11798 IMS family HHH motif TSH58p_03720 PF13438 Domain of unknown function (DUF4113) TSH58p_03720 PF11799 impB/mucB/samB family C-terminal domain TSH58p_03720 PF00817 impB/mucB/samB family TSH58p_03735 PF02371 Transposase IS116/IS110/IS902 family TSH58p_03735 PF01548 Transposase TSH58p_03765 PF00999 Sodium/hydrogen exchanger family TSH58p_03765 PF02254 TrkA-N domain TSH58p_03780 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain TSH58p_03780 PF01077 Nitrite and sulphite reductase 4Fe-4S domain TSH58p_03790 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases TSH58p_03795 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases TSH58p_03795 PF14824 Sirohaem biosynthesis protein central TSH58p_03795 PF10414 Sirohaem synthase dimerisation region TSH58p_03800 PF01507 Phosphoadenosine phosphosulfate reductase family TSH58p_03805 PF01507 Phosphoadenosine phosphosulfate reductase family TSH58p_03810 PF00009 Elongation factor Tu GTP binding domain TSH58p_03815 PF00005 ABC transporter TSH58p_03825 PF00005 ABC transporter TSH58p_03845 PF00501 AMP-binding enzyme TSH58p_03845 PF13193 AMP-binding enzyme C-terminal domain TSH58p_03850 PF13411 MerR HTH family regulatory protein TSH58p_03865 PF07690 Major Facilitator Superfamily TSH58p_03870 PF03079 ARD/ARD' family TSH58p_03885 PF16653 Saccharopine dehydrogenase C-terminal domain TSH58p_03885 PF03435 Saccharopine dehydrogenase NADP binding domain TSH58p_03890 PF03186 CobD/Cbib protein TSH58p_03895 PF00155 Aminotransferase class I and II TSH58p_03900 PF00990 Diguanylate cyclase, GGDEF domain TSH58p_03900 PF00072 Response regulator receiver domain TSH58p_03905 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain TSH58p_03905 PF08447 PAS fold TSH58p_03910 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain TSH58p_03910 PF00672 HAMP domain TSH58p_03910 PF02743 Cache domain TSH58p_03915 PF00512 His Kinase A (phospho-acceptor) domain TSH58p_03915 PF01627 Hpt domain TSH58p_03915 PF00072 Response regulator receiver domain TSH58p_03915 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) TSH58p_03915 PF00672 HAMP domain TSH58p_03915 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase TSH58p_03925 PF02705 K+ potassium transporter TSH58p_03935 PF00072 Response regulator receiver domain TSH58p_03935 PF00196 Bacterial regulatory proteins, luxR family TSH58p_03945 PF00196 Bacterial regulatory proteins, luxR family TSH58p_03945 PF00072 Response regulator receiver domain TSH58p_03965 PF01926 50S ribosome-binding GTPase TSH58p_03965 PF14714 KH-domain-like of EngA bacterial GTPase enzymes, C-terminal TSH58p_03975 PF00156 Phosphoribosyl transferase domain TSH58p_03975 PF13537 Glutamine amidotransferase domain TSH58p_03985 PF18073 Rubredoxin metal binding domain TSH58p_03985 PF06745 KaiC TSH58p_03990 PF00557 Metallopeptidase family M24 TSH58p_04005 PF00005 ABC transporter TSH58p_04010 PF02405 Permease MlaE TSH58p_04015 PF00842 Alanine racemase, C-terminal domain TSH58p_04015 PF01168 Alanine racemase, N-terminal domain TSH58p_04020 PF03796 DnaB-like helicase C terminal domain TSH58p_04020 PF00772 DnaB-like helicase N terminal domain TSH58p_04030 PF03948 Ribosomal protein L9, C-terminal domain TSH58p_04030 PF01281 Ribosomal protein L9, N-terminal domain TSH58p_04040 PF01084 Ribosomal protein S18 TSH58p_04045 PF01250 Ribosomal protein S6 TSH58p_04050 PF00698 Acyl transferase domain TSH58p_04060 PF00550 Phosphopantetheine attachment site TSH58p_04065 PF02801 Beta-ketoacyl synthase, C-terminal domain TSH58p_04065 PF00109 Beta-ketoacyl synthase, N-terminal domain TSH58p_04070 PF02618 YceG-like family TSH58p_04080 PF01464 Transglycosylase SLT domain TSH58p_04085 PF00701 Dihydrodipicolinate synthetase family TSH58p_04090 PF01668 SmpB protein TSH58p_04095 PF05175 Methyltransferase small domain TSH58p_04095 PF08468 Methyltransferase small domain N-terminal TSH58p_04100 PF00490 Delta-aminolevulinic acid dehydratase TSH58p_04105 PF00149 Calcineurin-like phosphoesterase TSH58p_04110 PF00781 Diacylglycerol kinase catalytic domain TSH58p_04115 PF00378 Enoyl-CoA hydratase/isomerase TSH58p_04120 PF12802 MarR family TSH58p_04125 PF12399 Branched-chain amino acid ATP-binding cassette transporter TSH58p_04125 PF00005 ABC transporter TSH58p_04130 PF00005 ABC transporter TSH58p_04140 PF02653 Branched-chain amino acid transport system / permease component TSH58p_04155 PF01262 Alanine dehydrogenase/PNT, C-terminal domain TSH58p_04155 PF05222 Alanine dehydrogenase/PNT, N-terminal domain TSH58p_04165 PF00149 Calcineurin-like phosphoesterase TSH58p_04165 PF02872 5'-nucleotidase, C-terminal domain TSH58p_04170 PF00117 Glutamine amidotransferase class-I TSH58p_04175 PF02348 Cytidylyltransferase TSH58p_04180 PF02625 XdhC and CoxI family TSH58p_04180 PF13478 XdhC Rossmann domain TSH58p_04195 PF07724 AAA domain (Cdc48 subfamily) TSH58p_04195 PF02861 Clp amino terminal domain, pathogenicity island component TSH58p_04195 PF10431 C-terminal, D2-small domain, of ClpB protein TSH58p_04195 PF17871 AAA lid domain TSH58p_04195 PF00004 ATPase family associated with various cellular activities (AAA) TSH58p_04200 PF00941 FAD binding domain in molybdopterin dehydrogenase TSH58p_04200 PF03450 CO dehydrogenase flavoprotein C-terminal domain TSH58p_04205 PF01315 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain TSH58p_04205 PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase TSH58p_04210 PF00111 2Fe-2S iron-sulfur cluster binding domain TSH58p_04210 PF01799 [2Fe-2S] binding domain TSH58p_04215 PF16868 NMT1-like family TSH58p_04250 PF00850 Histone deacetylase domain TSH58p_04295 PF01502 Phosphoribosyl-AMP cyclohydrolase TSH58p_04300 PF01053 Cys/Met metabolism PLP-dependent enzyme TSH58p_04305 PF00497 Bacterial extracellular solute-binding proteins, family 3 TSH58p_04310 PF00528 Binding-protein-dependent transport system inner membrane component TSH58p_04315 PF00528 Binding-protein-dependent transport system inner membrane component TSH58p_04320 PF00005 ABC transporter TSH58p_04325 PF00155 Aminotransferase class I and II TSH58p_04345 PF00581 Rhodanese-like domain TSH58p_04350 PF01411 tRNA synthetases class II (A) TSH58p_04350 PF02272 DHHA1 domain TSH58p_04350 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain TSH58p_04355 PF00571 CBS domain TSH58p_04355 PF00291 Pyridoxal-phosphate dependent enzyme TSH58p_04360 PF00293 NUDIX domain TSH58p_04365 PF00595 PDZ domain TSH58p_04365 PF13180 PDZ domain TSH58p_04380 PF02899 Phage integrase, N-terminal SAM-like domain TSH58p_04380 PF00589 Phage integrase family TSH58p_04485 PF02321 Outer membrane efflux protein TSH58p_04495 PF08264 Anticodon-binding domain of tRNA TSH58p_04495 PF00133 tRNA synthetases class I (I, L, M and V) TSH58p_04495 PF10458 Valyl tRNA synthetase tRNA binding arm TSH58p_04500 PF00672 HAMP domain TSH58p_04500 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain TSH58p_04510 PF05036 Sporulation related domain TSH58p_04510 PF03330 Lytic transglycolase TSH58p_04515 PF07943 Penicillin-binding protein 5, C-terminal domain TSH58p_04515 PF00768 D-alanyl-D-alanine carboxypeptidase TSH58p_04520 PF02223 Thymidylate kinase TSH58p_04525 PF09115 DNA polymerase III, delta subunit, C terminal TSH58p_04530 PF09334 tRNA synthetases class I (M) TSH58p_04530 PF08264 Anticodon-binding domain of tRNA TSH58p_04535 PF01026 TatD related DNase TSH58p_04540 PF12706 Beta-lactamase superfamily domain TSH58p_04540 PF03099 Biotin/lipoate A/B protein ligase family TSH58p_04565 PF04371 Porphyromonas-type peptidyl-arginine deiminase TSH58p_04570 PF00528 Binding-protein-dependent transport system inner membrane component TSH58p_04575 PF00528 Binding-protein-dependent transport system inner membrane component TSH58p_04580 PF08402 TOBE domain TSH58p_04580 PF00005 ABC transporter TSH58p_04585 PF13416 Bacterial extracellular solute-binding protein TSH58p_04590 PF00120 Glutamine synthetase, catalytic domain TSH58p_04595 PF01266 FAD dependent oxidoreductase TSH58p_04625 PF03741 Integral membrane protein TerC family TSH58p_04630 PF00216 Bacterial DNA-binding protein TSH58p_04635 PF05443 ROS/MUCR transcriptional regulator protein TSH58p_04645 PF04542 Sigma-70 region 2 TSH58p_04645 PF04545 Sigma-70, region 4 TSH58p_04645 PF00140 Sigma-70 factor, region 1.2 TSH58p_04670 PF01810 LysE type translocator TSH58p_04680 PF02391 MoaE protein TSH58p_04685 PF02597 ThiS family TSH58p_04690 PF03454 MoeA C-terminal region (domain IV) TSH58p_04690 PF03453 MoeA N-terminal region (domain I and II) TSH58p_04690 PF00994 Probable molybdopterin binding domain TSH58p_04695 PF03205 Molybdopterin guanine dinucleotide synthesis protein B TSH58p_04700 PF01066 CDP-alcohol phosphatidyltransferase TSH58p_04705 PF02151 UvrB/uvrC motif TSH58p_04705 PF08459 UvrC Helix-hairpin-helix N-terminal TSH58p_04705 PF12826 Helix-hairpin-helix motif TSH58p_04705 PF01541 GIY-YIG catalytic domain TSH58p_04750 PF00501 AMP-binding enzyme TSH58p_04750 PF13193 AMP-binding enzyme C-terminal domain TSH58p_04750 PF00550 Phosphopantetheine attachment site TSH58p_04755 PF05681 Fumarate hydratase (Fumerase) TSH58p_04755 PF05683 Fumarase C-terminus TSH58p_04765 PF00849 RNA pseudouridylate synthase TSH58p_04775 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain TSH58p_04775 PF01855 Pyruvate flavodoxin/ferredoxin oxidoreductase, thiamine diP-bdg TSH58p_04775 PF01558 Pyruvate ferredoxin/flavodoxin oxidoreductase TSH58p_04775 PF17147 Pyruvate:ferredoxin oxidoreductase core domain II TSH58p_04775 PF10371 Domain of unknown function TSH58p_04780 PF00072 Response regulator receiver domain TSH58p_04780 PF01627 Hpt domain TSH58p_04780 PF00672 HAMP domain TSH58p_04780 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase TSH58p_04780 PF00512 His Kinase A (phospho-acceptor) domain TSH58p_04785 PF00196 Bacterial regulatory proteins, luxR family TSH58p_04785 PF00072 Response regulator receiver domain TSH58p_04790 PF00691 OmpA family TSH58p_04805 PF13458 Periplasmic binding protein TSH58p_04815 PF00005 ABC transporter TSH58p_04820 PF12399 Branched-chain amino acid ATP-binding cassette transporter TSH58p_04820 PF00005 ABC transporter TSH58p_04825 PF11862 Domain of unknown function (DUF3382) TSH58p_04825 PF02653 Branched-chain amino acid transport system / permease component TSH58p_04830 PF02653 Branched-chain amino acid transport system / permease component TSH58p_04840 PF00480 ROK family TSH58p_04860 PF00535 Glycosyl transferase family 2 TSH58p_04865 PF13180 PDZ domain TSH58p_04880 PF01895 PhoU domain TSH58p_04890 PF01047 MarR family TSH58p_04895 PF00795 Carbon-nitrogen hydrolase TSH58p_04915 PF01381 Helix-turn-helix TSH58p_04920 PF00535 Glycosyl transferase family 2 TSH58p_04945 PF01022 Bacterial regulatory protein, arsR family TSH58p_04970 PF09557 Domain of unknown function (DUF2382) TSH58p_04970 PF05239 PRC-barrel domain TSH58p_04975 PF02492 CobW/HypB/UreG, nucleotide-binding domain TSH58p_04980 PF01730 UreF TSH58p_04985 PF05194 UreE urease accessory protein, C-terminal domain TSH58p_04985 PF02814 UreE urease accessory protein, N-terminal domain TSH58p_04990 PF01177 Asp/Glu/Hydantoin racemase TSH58p_04995 PF01979 Amidohydrolase family TSH58p_04995 PF00449 Urease alpha-subunit, N-terminal domain TSH58p_05000 PF00699 Urease beta subunit TSH58p_05005 PF00547 Urease, gamma subunit TSH58p_05010 PF03033 Glycosyltransferase family 28 N-terminal domain TSH58p_05010 PF00201 UDP-glucoronosyl and UDP-glucosyl transferase TSH58p_05015 PF01774 UreD urease accessory protein TSH58p_05020 PF01315 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain TSH58p_05020 PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase TSH58p_05025 PF00111 2Fe-2S iron-sulfur cluster binding domain TSH58p_05025 PF01799 [2Fe-2S] binding domain TSH58p_05030 PF00072 Response regulator receiver domain TSH58p_05030 PF00196 Bacterial regulatory proteins, luxR family TSH58p_05035 PF00196 Bacterial regulatory proteins, luxR family TSH58p_05035 PF00072 Response regulator receiver domain TSH58p_05040 PF01965 DJ-1/PfpI family TSH58p_05050 PF01266 FAD dependent oxidoreductase TSH58p_05055 PF00158 Sigma-54 interaction domain TSH58p_05055 PF18024 Helix-turn-helix domain TSH58p_05065 PF00132 Bacterial transferase hexapeptide (six repeats) TSH58p_05080 PF02896 PEP-utilising enzyme, TIM barrel domain TSH58p_05080 PF01326 Pyruvate phosphate dikinase, PEP/pyruvate binding domain TSH58p_05080 PF00391 PEP-utilising enzyme, mobile domain TSH58p_05090 PF02887 Pyruvate kinase, alpha/beta domain TSH58p_05090 PF00224 Pyruvate kinase, barrel domain TSH58p_05095 PF07729 FCD domain TSH58p_05095 PF00392 Bacterial regulatory proteins, gntR family TSH58p_05100 PF02581 Thiamine monophosphate synthase TSH58p_05105 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain TSH58p_05105 PF00205 Thiamine pyrophosphate enzyme, central domain TSH58p_05105 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain TSH58p_05110 PF01261 Xylose isomerase-like TIM barrel TSH58p_05115 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase TSH58p_05115 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase TSH58p_05125 PF13660 Domain of unknown function (DUF4147) TSH58p_05125 PF05161 MOFRL family TSH58p_05130 PF07690 Major Facilitator Superfamily TSH58p_05135 PF01964 Radical SAM ThiC family TSH58p_05135 PF13667 ThiC-associated domain TSH58p_05145 PF07690 Major Facilitator Superfamily TSH58p_05150 PF02629 CoA binding domain TSH58p_05150 PF00549 CoA-ligase TSH58p_05155 PF00549 CoA-ligase TSH58p_05155 PF08442 ATP-grasp domain TSH58p_05160 PF02515 CoA-transferase family III TSH58p_05165 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain TSH58p_05165 PF00205 Thiamine pyrophosphate enzyme, central domain TSH58p_05165 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain TSH58p_05170 PF07729 FCD domain TSH58p_05170 PF00392 Bacterial regulatory proteins, gntR family TSH58p_05175 PF00571 CBS domain TSH58p_05180 PF02233 NAD(P) transhydrogenase beta subunit TSH58p_05185 PF12769 4TM region of pyridine nucleotide transhydrogenase, mitoch TSH58p_05190 PF01262 Alanine dehydrogenase/PNT, C-terminal domain TSH58p_05190 PF05222 Alanine dehydrogenase/PNT, N-terminal domain TSH58p_05195 PF00571 CBS domain TSH58p_05200 PF08546 Ketopantoate reductase PanE/ApbA C terminal TSH58p_05200 PF02558 Ketopantoate reductase PanE/ApbA TSH58p_05210 PF00850 Histone deacetylase domain TSH58p_05215 PF07690 Major Facilitator Superfamily TSH58p_05225 PF00248 Aldo/keto reductase family TSH58p_05235 PF01368 DHH family TSH58p_05235 PF02272 DHHA1 domain TSH58p_05235 PF17768 RecJ OB domain TSH58p_05235 PF10141 Single-strand DNA-specific exonuclease, C terminal domain TSH58p_05240 PF00465 Iron-containing alcohol dehydrogenase TSH58p_05245 PF03320 Bacterial fructose-1,6-bisphosphatase, glpX-encoded TSH58p_05250 PF03447 Homoserine dehydrogenase, NAD binding domain TSH58p_05250 PF00742 Homoserine dehydrogenase TSH58p_05250 PF01842 ACT domain TSH58p_05255 PF00155 Aminotransferase class I and II TSH58p_05260 PF07690 Major Facilitator Superfamily TSH58p_05265 PF01047 MarR family TSH58p_05275 PF07167 Poly-beta-hydroxybutyrate polymerase (PhaC) N-terminus TSH58p_05275 PF00561 alpha/beta hydrolase fold TSH58p_05280 PF00691 OmpA family TSH58p_05285 PF00132 Bacterial transferase hexapeptide (six repeats) TSH58p_05290 PF02774 Semialdehyde dehydrogenase, dimerisation domain TSH58p_05290 PF01118 Semialdehyde dehydrogenase, NAD binding domain TSH58p_05295 PF00380 Ribosomal protein S9/S16 TSH58p_05300 PF00572 Ribosomal protein L13 TSH58p_05310 PF00378 Enoyl-CoA hydratase/isomerase TSH58p_05315 PF13380 CoA binding domain TSH58p_05320 PF01053 Cys/Met metabolism PLP-dependent enzyme TSH58p_05335 PF03091 CutA1 divalent ion tolerance protein TSH58p_05350 PF00512 His Kinase A (phospho-acceptor) domain TSH58p_05350 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase TSH58p_05380 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain TSH58p_05380 PF00672 HAMP domain TSH58p_05380 PF17200 Single Cache domain 2 TSH58p_05385 PF00072 Response regulator receiver domain TSH58p_05385 PF00486 Transcriptional regulatory protein, C terminal TSH58p_05390 PF00072 Response regulator receiver domain TSH58p_05390 PF13188 PAS domain TSH58p_05390 PF08448 PAS fold TSH58p_05390 PF00512 His Kinase A (phospho-acceptor) domain TSH58p_05390 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase TSH58p_05395 PF00072 Response regulator receiver domain TSH58p_05400 PF00072 Response regulator receiver domain TSH58p_05400 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase TSH58p_05400 PF00512 His Kinase A (phospho-acceptor) domain TSH58p_05400 PF08448 PAS fold TSH58p_05400 PF13188 PAS domain TSH58p_05405 PF03960 ArsC family TSH58p_05410 PF16868 NMT1-like family TSH58p_05415 PF00528 Binding-protein-dependent transport system inner membrane component TSH58p_05420 PF00005 ABC transporter TSH58p_05435 PF00155 Aminotransferase class I and II TSH58p_05440 PF00291 Pyridoxal-phosphate dependent enzyme TSH58p_05445 PF10073 Uncharacterized protein conserved in bacteria (DUF2312) TSH58p_05450 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term TSH58p_05465 PF03023 Lipid II flippase MurJ TSH58p_05470 PF12697 Alpha/beta hydrolase family TSH58p_05485 PF00072 Response regulator receiver domain TSH58p_05485 PF00196 Bacterial regulatory proteins, luxR family TSH58p_05490 PF00529 HlyD membrane-fusion protein of T1SS TSH58p_05495 PF00005 ABC transporter TSH58p_05495 PF00664 ABC transporter transmembrane region TSH58p_05500 PF00221 Aromatic amino acid lyase TSH58p_05505 PF08534 Redoxin TSH58p_05520 PF00004 ATPase family associated with various cellular activities (AAA) TSH58p_05520 PF17862 AAA+ lid domain TSH58p_05520 PF01434 Peptidase family M41 TSH58p_05520 PF06480 FtsH Extracellular TSH58p_05525 PF01171 PP-loop family TSH58p_05535 PF00113 Enolase, C-terminal TIM barrel domain TSH58p_05535 PF03952 Enolase, N-terminal domain TSH58p_05545 PF12706 Beta-lactamase superfamily domain TSH58p_05550 PF03070 TENA/THI-4/PQQC family TSH58p_05555 PF05402 Coenzyme PQQ synthesis protein D (PqqD) TSH58p_05560 PF13186 Iron-sulfur cluster-binding domain TSH58p_05560 PF04055 Radical SAM superfamily TSH58p_05575 PF00793 DAHP synthetase I family TSH58p_05580 PF01738 Dienelactone hydrolase family TSH58p_05585 PF00117 Glutamine amidotransferase class-I TSH58p_05585 PF06418 CTP synthase N-terminus TSH58p_05590 PF03840 Preprotein translocase SecG subunit TSH58p_05595 PF00121 Triosephosphate isomerase TSH58p_05605 PF00425 chorismate binding enzyme TSH58p_05605 PF04715 Anthranilate synthase component I, N terminal region TSH58p_05630 PF00117 Glutamine amidotransferase class-I TSH58p_05635 PF02885 Glycosyl transferase family, helical bundle domain TSH58p_05635 PF00591 Glycosyl transferase family, a/b domain TSH58p_05640 PF00218 Indole-3-glycerol phosphate synthase TSH58p_05645 PF00583 Acetyltransferase (GNAT) family TSH58p_05650 PF01967 MoaC family TSH58p_05655 PF00994 Probable molybdopterin binding domain TSH58p_05655 PF03453 MoeA N-terminal region (domain I and II) TSH58p_05655 PF03454 MoeA C-terminal region (domain IV) TSH58p_05660 PF00717 Peptidase S24-like TSH58p_05660 PF01726 LexA DNA binding domain TSH58p_05665 PF00753 Metallo-beta-lactamase superfamily TSH58p_05665 PF03772 Competence protein TSH58p_05670 PF00749 tRNA synthetases class I (E and Q), catalytic domain TSH58p_05675 PF00285 Citrate synthase, C-terminal domain TSH58p_05685 PF13417 Glutathione S-transferase, N-terminal domain TSH58p_05690 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family TSH58p_05690 PF03466 LysR substrate binding domain TSH58p_05700 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily TSH58p_05705 PF02684 Lipid-A-disaccharide synthetase TSH58p_05710 PF17930 LpxI N-terminal domain TSH58p_05710 PF06230 LpxI C-terminal domain TSH58p_05715 PF13720 Udp N-acetylglucosamine O-acyltransferase; Domain 2 TSH58p_05715 PF00132 Bacterial transferase hexapeptide (six repeats) TSH58p_05720 PF07977 FabA-like domain TSH58p_05730 PF01103 Surface antigen TSH58p_05730 PF07244 Surface antigen variable number repeat TSH58p_05735 PF17820 PDZ domain TSH58p_05735 PF02163 Peptidase family M50 TSH58p_05740 PF13288 DXP reductoisomerase C-terminal domain TSH58p_05740 PF08436 1-deoxy-D-xylulose 5-phosphate reductoisomerase C-terminal domain TSH58p_05740 PF02670 1-deoxy-D-xylulose 5-phosphate reductoisomerase TSH58p_05750 PF01255 Putative undecaprenyl diphosphate synthase TSH58p_05755 PF01765 Ribosome recycling factor TSH58p_05760 PF00696 Amino acid kinase family TSH58p_05765 PF00889 Elongation factor TS TSH58p_05770 PF00318 Ribosomal protein S2 TSH58p_05775 PF02811 PHP domain TSH58p_05775 PF17657 Bacterial DNA polymerase III alpha subunit finger domain TSH58p_05775 PF07733 Bacterial DNA polymerase III alpha NTPase domain TSH58p_05775 PF14579 Helix-hairpin-helix motif TSH58p_05785 PF00892 EamA-like transporter family TSH58p_05790 PF01738 Dienelactone hydrolase family TSH58p_05795 PF00005 ABC transporter TSH58p_05800 PF12704 MacB-like periplasmic core domain TSH58p_05800 PF02687 FtsX-like permease family TSH58p_05805 PF03129 Anticodon binding domain TSH58p_05805 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) TSH58p_05820 PF13302 Acetyltransferase (GNAT) domain TSH58p_05820 PF03352 Methyladenine glycosylase TSH58p_05820 PF13673 Acetyltransferase (GNAT) domain TSH58p_05820 PF00958 GMP synthase C terminal domain TSH58p_05820 PF00117 Glutamine amidotransferase class-I TSH58p_05835 PF17770 Ribonuclease J C-terminal domain TSH58p_05835 PF07521 Zn-dependent metallo-hydrolase RNA specificity domain TSH58p_05835 PF12706 Beta-lactamase superfamily domain TSH58p_05840 PF03309 Type III pantothenate kinase TSH58p_05845 PF03099 Biotin/lipoate A/B protein ligase family TSH58p_05845 PF02237 Biotin protein ligase C terminal domain TSH58p_05850 PF00361 Proton-conducting membrane transporter TSH58p_05855 PF01059 NADH-ubiquinone oxidoreductase chain 4, amino terminus TSH58p_05855 PF00361 Proton-conducting membrane transporter TSH58p_05860 PF00361 Proton-conducting membrane transporter TSH58p_05860 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus TSH58p_05865 PF00420 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L TSH58p_05870 PF00499 NADH-ubiquinone/plastoquinone oxidoreductase chain 6 TSH58p_05875 PF12838 4Fe-4S dicluster domain TSH58p_05880 PF00146 NADH dehydrogenase TSH58p_05885 PF09326 NADH-ubiquinone oxidoreductase subunit G, C-terminal TSH58p_05885 PF10588 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region TSH58p_05885 PF00384 Molybdopterin oxidoreductase TSH58p_05890 PF10531 SLBB domain TSH58p_05890 PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit TSH58p_05890 PF10589 NADH-ubiquinone oxidoreductase-F iron-sulfur binding region TSH58p_05900 PF00346 Respiratory-chain NADH dehydrogenase, 49 Kd subunit TSH58p_05905 PF00329 Respiratory-chain NADH dehydrogenase, 30 Kd subunit TSH58p_05910 PF01058 NADH ubiquinone oxidoreductase, 20 Kd subunit TSH58p_05915 PF00507 NADH-ubiquinone/plastoquinone oxidoreductase, chain 3 TSH58p_05930 PF00216 Bacterial DNA-binding protein TSH58p_05935 PF02190 ATP-dependent protease La (LON) substrate-binding domain TSH58p_05935 PF00004 ATPase family associated with various cellular activities (AAA) TSH58p_05935 PF05362 Lon protease (S16) C-terminal proteolytic domain TSH58p_05940 PF10431 C-terminal, D2-small domain, of ClpB protein TSH58p_05940 PF06689 ClpX C4-type zinc finger TSH58p_05940 PF07724 AAA domain (Cdc48 subfamily) TSH58p_05945 PF00574 Clp protease TSH58p_05950 PF05698 Bacterial trigger factor protein (TF) C-terminus TSH58p_05950 PF05697 Bacterial trigger factor protein (TF) TSH58p_05950 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase TSH58p_05965 PF03853 YjeF-related protein N-terminus TSH58p_05965 PF01256 Carbohydrate kinase TSH58p_05980 PF00543 Nitrogen regulatory protein P-II TSH58p_05985 PF03951 Glutamine synthetase, beta-Grasp domain TSH58p_05985 PF00120 Glutamine synthetase, catalytic domain TSH58p_05990 PF00012 Hsp70 protein TSH58p_05995 PF00171 Aldehyde dehydrogenase family TSH58p_05995 PF01575 MaoC like domain TSH58p_06000 PF02567 Phenazine biosynthesis-like protein TSH58p_06015 PF01027 Inhibitor of apoptosis-promoting Bax1 TSH58p_06030 PF00392 Bacterial regulatory proteins, gntR family TSH58p_06030 PF00155 Aminotransferase class I and II TSH58p_06035 PF08543 Phosphomethylpyrimidine kinase TSH58p_06035 PF02581 Thiamine monophosphate synthase TSH58p_06040 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III TSH58p_06040 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain TSH58p_06040 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II TSH58p_06040 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I TSH58p_06045 PF00809 Pterin binding enzyme TSH58p_06055 PF10017 Histidine-specific methyltransferase, SAM-dependent TSH58p_06060 PF12867 DinB superfamily TSH58p_06060 PF03781 Sulfatase-modifying factor enzyme 1 TSH58p_06065 PF00563 EAL domain TSH58p_06065 PF03707 Bacterial signalling protein N terminal repeat TSH58p_06065 PF00990 Diguanylate cyclase, GGDEF domain TSH58p_06075 PF10996 Beta-Casp domain TSH58p_06075 PF00753 Metallo-beta-lactamase superfamily TSH58p_06075 PF07521 Zn-dependent metallo-hydrolase RNA specificity domain TSH58p_06080 PF00156 Phosphoribosyl transferase domain TSH58p_06085 PF00990 Diguanylate cyclase, GGDEF domain TSH58p_06085 PF00072 Response regulator receiver domain TSH58p_06115 PF02608 ABC transporter substrate-binding protein PnrA-like TSH58p_06130 PF00005 ABC transporter TSH58p_06135 PF14760 Rnk N-terminus TSH58p_06135 PF01272 Transcription elongation factor, GreA/GreB, C-term TSH58p_06140 PF01571 Aminomethyltransferase folate-binding domain TSH58p_06160 PF13419 Haloacid dehalogenase-like hydrolase TSH58p_06165 PF03594 Benzoate membrane transport protein TSH58p_06170 PF07729 FCD domain TSH58p_06170 PF00392 Bacterial regulatory proteins, gntR family TSH58p_06175 PF00849 RNA pseudouridylate synthase TSH58p_06175 PF01479 S4 domain TSH58p_06180 PF02537 CrcB-like protein, Camphor Resistance (CrcB) TSH58p_06195 PF12002 MgsA AAA+ ATPase C terminal TSH58p_06195 PF00004 ATPase family associated with various cellular activities (AAA) TSH58p_06195 PF16193 AAA C-terminal domain TSH58p_06210 PF09335 SNARE associated Golgi protein TSH58p_06215 PF01196 Ribosomal protein L17 TSH58p_06220 PF01000 RNA polymerase Rpb3/RpoA insert domain TSH58p_06220 PF03118 Bacterial RNA polymerase, alpha chain C terminal domain TSH58p_06220 PF01193 RNA polymerase Rpb3/Rpb11 dimerisation domain TSH58p_06225 PF00411 Ribosomal protein S11 TSH58p_06230 PF00416 Ribosomal protein S13/S18 TSH58p_06235 PF02887 Pyruvate kinase, alpha/beta domain TSH58p_06235 PF00224 Pyruvate kinase, barrel domain TSH58p_06240 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase TSH58p_06240 PF00512 His Kinase A (phospho-acceptor) domain TSH58p_06240 PF00989 PAS fold TSH58p_06245 PF09335 SNARE associated Golgi protein TSH58p_06250 PF04304 Protein of unknown function (DUF454) TSH58p_06255 PF13746 4Fe-4S dicluster domain TSH58p_06255 PF12801 4Fe-4S binding domain TSH58p_06255 PF11614 IG-like fold at C-terminal of FixG, putative oxidoreductase TSH58p_06260 PF00994 Probable molybdopterin binding domain TSH58p_06275 PF13419 Haloacid dehalogenase-like hydrolase TSH58p_06285 PF00291 Pyridoxal-phosphate dependent enzyme TSH58p_06295 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase TSH58p_06295 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase TSH58p_06310 PF01638 HxlR-like helix-turn-helix TSH58p_06315 PF00107 Zinc-binding dehydrogenase TSH58p_06315 PF08240 Alcohol dehydrogenase GroES-like domain TSH58p_06320 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family TSH58p_06320 PF03459 TOBE domain TSH58p_06325 PF00834 Ribulose-phosphate 3 epimerase family TSH58p_06330 PF04226 Transglycosylase associated protein TSH58p_06335 PF00072 Response regulator receiver domain TSH58p_06345 PF02586 SOS response associated peptidase (SRAP) TSH58p_06350 PF01315 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain TSH58p_06350 PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase TSH58p_06355 PF00563 EAL domain TSH58p_06355 PF01590 GAF domain TSH58p_06355 PF00990 Diguanylate cyclase, GGDEF domain TSH58p_06355 PF00989 PAS fold TSH58p_06365 PF11896 Domain of unknown function (DUF3416) TSH58p_06365 PF00128 Alpha amylase, catalytic domain TSH58p_06370 PF03976 Polyphosphate kinase 2 (PPK2) TSH58p_06375 PF03976 Polyphosphate kinase 2 (PPK2) TSH58p_06380 PF00654 Voltage gated chloride channel TSH58p_06390 PF00005 ABC transporter TSH58p_06395 PF00005 ABC transporter TSH58p_06395 PF12399 Branched-chain amino acid ATP-binding cassette transporter TSH58p_06415 PF00892 EamA-like transporter family TSH58p_06420 PF01593 Flavin containing amine oxidoreductase TSH58p_06425 PF07831 Pyrimidine nucleoside phosphorylase C-terminal domain TSH58p_06425 PF02885 Glycosyl transferase family, helical bundle domain TSH58p_06425 PF00591 Glycosyl transferase family, a/b domain TSH58p_06430 PF01791 DeoC/LacD family aldolase TSH58p_06435 PF01048 Phosphorylase superfamily TSH58p_06440 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region TSH58p_06475 PF00672 HAMP domain TSH58p_06475 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain TSH58p_06480 PF00905 Penicillin binding protein transpeptidase domain TSH58p_06480 PF03717 Penicillin-binding Protein dimerisation domain TSH58p_06490 PF04085 rod shape-determining protein MreC TSH58p_06500 PF03350 Uncharacterized protein family, UPF0114 TSH58p_06505 PF01895 PhoU domain TSH58p_06510 PF01450 Acetohydroxy acid isomeroreductase, catalytic domain TSH58p_06510 PF07991 Acetohydroxy acid isomeroreductase, NADPH-binding domain TSH58p_06515 PF10369 Small subunit of acetolactate synthase TSH58p_06520 PF00205 Thiamine pyrophosphate enzyme, central domain TSH58p_06520 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain TSH58p_06520 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain TSH58p_06525 PF00155 Aminotransferase class I and II TSH58p_06545 PF13180 PDZ domain TSH58p_06555 PF01145 SPFH domain / Band 7 family TSH58p_06560 PF01145 SPFH domain / Band 7 family TSH58p_06560 PF12221 Bacterial membrane protein N terminal TSH58p_06565 PF01883 Iron-sulfur cluster assembly protein TSH58p_06565 PF10609 NUBPL iron-transfer P-loop NTPase TSH58p_06570 PF02254 TrkA-N domain TSH58p_06570 PF00999 Sodium/hydrogen exchanger family TSH58p_06575 PF00005 ABC transporter TSH58p_06580 PF02653 Branched-chain amino acid transport system / permease component TSH58p_06605 PF02511 Thymidylate synthase complementing protein TSH58p_06620 PF04994 TfoX C-terminal domain TSH58p_06620 PF04993 TfoX N-terminal domain TSH58p_06630 PF01327 Polypeptide deformylase TSH58p_06635 PF01165 Ribosomal protein S21 TSH58p_06640 PF02548 Ketopantoate hydroxymethyltransferase TSH58p_06650 PF02233 NAD(P) transhydrogenase beta subunit TSH58p_06655 PF12769 4TM region of pyridine nucleotide transhydrogenase, mitoch TSH58p_06660 PF05222 Alanine dehydrogenase/PNT, N-terminal domain TSH58p_06660 PF01262 Alanine dehydrogenase/PNT, C-terminal domain TSH58p_06665 PF10073 Uncharacterized protein conserved in bacteria (DUF2312) TSH58p_06670 PF00117 Glutamine amidotransferase class-I TSH58p_06670 PF00425 chorismate binding enzyme TSH58p_06670 PF04715 Anthranilate synthase component I, N terminal region TSH58p_06690 PF00072 Response regulator receiver domain TSH58p_06725 PF04542 Sigma-70 region 2 TSH58p_06725 PF08281 Sigma-70, region 4 TSH58p_06735 PF13193 AMP-binding enzyme C-terminal domain TSH58p_06735 PF00501 AMP-binding enzyme TSH58p_06735 PF16177 Acetyl-coenzyme A synthetase N-terminus TSH58p_06760 PF01565 FAD binding domain TSH58p_06760 PF08031 Berberine and berberine like TSH58p_06765 PF00672 HAMP domain TSH58p_06765 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain TSH58p_06770 PF03109 ABC1 family TSH58p_06775 PF02547 Queuosine biosynthesis protein TSH58p_06780 PF01702 Queuine tRNA-ribosyltransferase TSH58p_06785 PF14489 QueF-like protein TSH58p_06790 PF08331 Domain of unknown function (DUF1730) TSH58p_06810 PF00672 HAMP domain TSH58p_06810 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain TSH58p_06820 PF00501 AMP-binding enzyme TSH58p_06820 PF13193 AMP-binding enzyme C-terminal domain TSH58p_06830 PF14748 Pyrroline-5-carboxylate reductase dimerisation TSH58p_06830 PF03807 NADP oxidoreductase coenzyme F420-dependent TSH58p_06865 PF00698 Acyl transferase domain TSH58p_06865 PF00550 Phosphopantetheine attachment site TSH58p_06865 PF08659 KR domain TSH58p_06865 PF14765 Polyketide synthase dehydratase TSH58p_06865 PF02801 Beta-ketoacyl synthase, C-terminal domain TSH58p_06865 PF00109 Beta-ketoacyl synthase, N-terminal domain TSH58p_06865 PF08240 Alcohol dehydrogenase GroES-like domain TSH58p_06865 PF16197 Ketoacyl-synthetase C-terminal extension TSH58p_06875 PF02441 Flavoprotein TSH58p_06880 PF00484 Carbonic anhydrase TSH58p_06885 PF07559 Flagellar basal body protein FlaE TSH58p_06885 PF06429 Flagellar basal body rod FlgEFG protein C-terminal TSH58p_06885 PF00460 Flagella basal body rod protein TSH58p_06900 PF13302 Acetyltransferase (GNAT) domain TSH58p_06910 PF00365 Phosphofructokinase TSH58p_06920 PF00731 AIR carboxylase TSH58p_06925 PF02222 ATP-grasp domain TSH58p_06925 PF17769 Phosphoribosylaminoimidazole carboxylase C-terminal domain TSH58p_06930 PF00563 EAL domain TSH58p_06930 PF13426 PAS domain TSH58p_06930 PF00990 Diguanylate cyclase, GGDEF domain TSH58p_06950 PF10415 Fumarase C C-terminus TSH58p_06950 PF00206 Lyase TSH58p_06965 PF00583 Acetyltransferase (GNAT) family TSH58p_06975 PF13439 Glycosyltransferase Family 4 TSH58p_06975 PF00534 Glycosyl transferases group 1 TSH58p_07000 PF00465 Iron-containing alcohol dehydrogenase TSH58p_07020 PF13406 Transglycosylase SLT domain TSH58p_07030 PF01894 Uncharacterised protein family UPF0047 TSH58p_07040 PF04891 NifQ TSH58p_07055 PF00072 Response regulator receiver domain TSH58p_07065 PF16736 Single Cache-like TSH58p_07065 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase TSH58p_07065 PF00989 PAS fold TSH58p_07065 PF00512 His Kinase A (phospho-acceptor) domain TSH58p_07070 PF13442 Cytochrome C oxidase, cbb3-type, subunit III TSH58p_07070 PF00034 Cytochrome c TSH58p_07070 PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase TSH58p_07075 PF00111 2Fe-2S iron-sulfur cluster binding domain TSH58p_07075 PF01799 [2Fe-2S] binding domain TSH58p_07080 PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase TSH58p_07080 PF13442 Cytochrome C oxidase, cbb3-type, subunit III TSH58p_07080 PF00034 Cytochrome c TSH58p_07090 PF13847 Methyltransferase domain TSH58p_07095 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family TSH58p_07095 PF03466 LysR substrate binding domain TSH58p_07100 PF00106 short chain dehydrogenase TSH58p_07120 PF00664 ABC transporter transmembrane region TSH58p_07120 PF00005 ABC transporter TSH58p_07125 PF00529 HlyD membrane-fusion protein of T1SS TSH58p_07125 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion TSH58p_07295 PF00583 Acetyltransferase (GNAT) family TSH58p_07365 PF00111 2Fe-2S iron-sulfur cluster binding domain TSH58p_07370 PF00226 DnaJ domain TSH58p_07370 PF07743 HSCB C-terminal oligomerisation domain TSH58p_07375 PF00266 Aminotransferase class-V TSH58p_07380 PF02082 Transcriptional regulator TSH58p_07385 PF00132 Bacterial transferase hexapeptide (six repeats) TSH58p_07390 PF02129 X-Pro dipeptidyl-peptidase (S15 family) TSH58p_07395 PF03702 Anhydro-N-acetylmuramic acid kinase TSH58p_07400 PF00579 tRNA synthetases class I (W and Y) TSH58p_07415 PF08335 GlnD PII-uridylyltransferase TSH58p_07415 PF03710 Glutamate-ammonia ligase adenylyltransferase TSH58p_07420 PF00578 AhpC/TSA family TSH58p_07425 PF13614 AAA domain TSH58p_07430 PF03481 Putative GTP-binding controlling metal-binding TSH58p_07430 PF01300 Telomere recombination TSH58p_07445 PF01565 FAD binding domain TSH58p_07445 PF02913 FAD linked oxidases, C-terminal domain TSH58p_07460 PF12806 Acetyl-CoA dehydrogenase C-terminal like TSH58p_07460 PF00441 Acyl-CoA dehydrogenase, C-terminal domain TSH58p_07460 PF02770 Acyl-CoA dehydrogenase, middle domain TSH58p_07460 PF02771 Acyl-CoA dehydrogenase, N-terminal domain TSH58p_07475 PF01066 CDP-alcohol phosphatidyltransferase TSH58p_07480 PF13183 4Fe-4S dicluster domain TSH58p_07480 PF02754 Cysteine-rich domain TSH58p_07485 PF01565 FAD binding domain TSH58p_07490 PF01565 FAD binding domain TSH58p_07490 PF02913 FAD linked oxidases, C-terminal domain TSH58p_07500 PF00444 Ribosomal protein L36 TSH58p_07510 PF03411 Penicillin-insensitive murein endopeptidase TSH58p_07525 PF00005 ABC transporter TSH58p_07535 PF00440 Bacterial regulatory proteins, tetR family TSH58p_07535 PF08362 YcdC-like protein, C-terminal region TSH58p_07540 PF02954 Bacterial regulatory protein, Fis family TSH58p_07540 PF13185 GAF domain TSH58p_07540 PF00158 Sigma-54 interaction domain TSH58p_07545 PF00211 Adenylate and Guanylate cyclase catalytic domain TSH58p_07550 PF02579 Dinitrogenase iron-molybdenum cofactor TSH58p_07550 PF04055 Radical SAM superfamily TSH58p_07555 PF12838 4Fe-4S dicluster domain TSH58p_07565 PF01816 Leucine rich repeat variant TSH58p_07565 PF05484 LRV protein FeS4 cluster TSH58p_07570 PF04319 NifZ domain TSH58p_07580 PF00266 Aminotransferase class-V TSH58p_07585 PF06988 NifT/FixU protein TSH58p_07595 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family TSH58p_07605 PF02525 Flavodoxin-like fold TSH58p_07610 PF13230 Glutamine amidotransferases class-II TSH58p_07615 PF03960 ArsC family TSH58p_07620 PF03747 ADP-ribosylglycohydrolase TSH58p_07625 PF07357 Dinitrogenase reductase ADP-ribosyltransferase (DRAT) TSH58p_07635 PF00142 4Fe-4S iron sulfur cluster binding proteins, NifH/frxC family TSH58p_07640 PF00148 Nitrogenase component 1 type Oxidoreductase TSH58p_07645 PF00148 Nitrogenase component 1 type Oxidoreductase TSH58p_07645 PF11844 Domain of unknown function (DUF3364) TSH58p_07655 PF07992 Pyridine nucleotide-disulphide oxidoreductase TSH58p_07660 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain TSH58p_07660 PF08447 PAS fold TSH58p_07660 PF13426 PAS domain TSH58p_07665 PF04324 BFD-like [2Fe-2S] binding domain TSH58p_07665 PF00148 Nitrogenase component 1 type Oxidoreductase TSH58p_07670 PF00148 Nitrogenase component 1 type Oxidoreductase TSH58p_07675 PF02579 Dinitrogenase iron-molybdenum cofactor TSH58p_07680 PF03270 Protein of unknown function, DUF269 TSH58p_07685 PF05082 Rop-like TSH58p_07690 PF13237 4Fe-4S dicluster domain TSH58p_07710 PF01521 Iron-sulphur cluster biosynthesis TSH58p_07715 PF01106 NifU-like domain TSH58p_07715 PF04324 BFD-like [2Fe-2S] binding domain TSH58p_07715 PF01592 NifU-like N terminal domain TSH58p_07720 PF00266 Aminotransferase class-V TSH58p_07725 PF00682 HMGL-like TSH58p_07735 PF03206 Nitrogen fixation protein NifW TSH58p_07740 PF01012 Electron transfer flavoprotein domain TSH58p_07745 PF01012 Electron transfer flavoprotein domain TSH58p_07745 PF00766 Electron transfer flavoprotein FAD-binding domain TSH58p_07750 PF07992 Pyridine nucleotide-disulphide oxidoreductase TSH58p_07765 PF12729 Four helix bundle sensory module for signal transduction TSH58p_07765 PF00672 HAMP domain TSH58p_07765 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain TSH58p_07770 PF00072 Response regulator receiver domain TSH58p_07770 PF00672 HAMP domain TSH58p_07770 PF00512 His Kinase A (phospho-acceptor) domain TSH58p_07770 PF01627 Hpt domain TSH58p_07770 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) TSH58p_07770 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase TSH58p_07780 PF00313 'Cold-shock' DNA-binding domain TSH58p_07785 PF13538 UvrD-like helicase C-terminal domain TSH58p_07785 PF18335 ATP-dependent RecD-like DNA helicase SH3 domain TSH58p_07785 PF14490 Helix-hairpin-helix containing domain TSH58p_07790 PF01274 Malate synthase TSH58p_07795 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain TSH58p_07795 PF00672 HAMP domain TSH58p_07800 PF00672 HAMP domain TSH58p_07800 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain TSH58p_07815 PF00982 Glycosyltransferase family 20 TSH58p_07820 PF02685 Glucokinase TSH58p_07830 PF01329 Pterin 4 alpha carbinolamine dehydratase TSH58p_07840 PF00266 Aminotransferase class-V TSH58p_07850 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain TSH58p_07850 PF13378 Enolase C-terminal domain-like TSH58p_07855 PF00672 HAMP domain TSH58p_07855 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain TSH58p_07855 PF12729 Four helix bundle sensory module for signal transduction TSH58p_07860 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain TSH58p_07860 PF00672 HAMP domain TSH58p_07860 PF17200 Single Cache domain 2 TSH58p_07875 PF03776 Septum formation topological specificity factor MinE TSH58p_07880 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain TSH58p_07885 PF03775 Septum formation inhibitor MinC, C-terminal domain TSH58p_07885 PF05209 Septum formation inhibitor MinC, N-terminal domain TSH58p_07890 PF02562 PhoH-like protein TSH58p_07895 PF17200 Single Cache domain 2 TSH58p_07895 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain TSH58p_07895 PF00672 HAMP domain TSH58p_07905 PF02630 SCO1/SenC TSH58p_07915 PF00119 ATP synthase A chain TSH58p_07920 PF00137 ATP synthase subunit C TSH58p_07925 PF00430 ATP synthase B/B' CF(0) TSH58p_07930 PF00430 ATP synthase B/B' CF(0) TSH58p_07935 PF02900 Catalytic LigB subunit of aromatic ring-opening dioxygenase TSH58p_07940 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) TSH58p_07940 PF00672 HAMP domain TSH58p_07940 PF01627 Hpt domain TSH58p_07940 PF00072 Response regulator receiver domain TSH58p_07940 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase TSH58p_07940 PF00512 His Kinase A (phospho-acceptor) domain TSH58p_07945 PF00596 Class II Aldolase and Adducin N-terminal domain TSH58p_07970 PF13247 4Fe-4S dicluster domain TSH58p_07975 PF01568 Molydopterin dinucleotide binding domain TSH58p_07975 PF00384 Molybdopterin oxidoreductase TSH58p_07975 PF04879 Molybdopterin oxidoreductase Fe4S4 domain TSH58p_08000 PF12804 MobA-like NTP transferase domain TSH58p_08005 PF02634 FdhD/NarQ family TSH58p_08010 PF00528 Binding-protein-dependent transport system inner membrane component TSH58p_08015 PF12849 PBP superfamily domain TSH58p_08020 PF00768 D-alanyl-D-alanine carboxypeptidase TSH58p_08020 PF07943 Penicillin-binding protein 5, C-terminal domain TSH58p_08045 PF02617 ATP-dependent Clp protease adaptor protein ClpS TSH58p_08050 PF02861 Clp amino terminal domain, pathogenicity island component TSH58p_08050 PF10431 C-terminal, D2-small domain, of ClpB protein TSH58p_08050 PF17871 AAA lid domain TSH58p_08050 PF07724 AAA domain (Cdc48 subfamily) TSH58p_08050 PF00004 ATPase family associated with various cellular activities (AAA) TSH58p_08060 PF02515 CoA-transferase family III TSH58p_08070 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region TSH58p_08095 PF01814 Hemerythrin HHE cation binding domain TSH58p_08100 PF02867 Ribonucleotide reductase, barrel domain TSH58p_08100 PF08471 Class II vitamin B12-dependent ribonucleotide reductase TSH58p_08125 PF03330 Lytic transglycolase TSH58p_08125 PF05036 Sporulation related domain TSH58p_08130 PF00106 short chain dehydrogenase TSH58p_08135 PF01575 MaoC like domain TSH58p_08140 PF01687 Riboflavin kinase TSH58p_08140 PF06574 FAD synthetase TSH58p_08150 PF00156 Phosphoribosyl transferase domain TSH58p_08155 PF08264 Anticodon-binding domain of tRNA TSH58p_08155 PF00133 tRNA synthetases class I (I, L, M and V) TSH58p_08160 PF01252 Signal peptidase (SPase) II TSH58p_08170 PF05193 Peptidase M16 inactive domain TSH58p_08170 PF00675 Insulinase (Peptidase family M16) TSH58p_08175 PF05193 Peptidase M16 inactive domain TSH58p_08185 PF00342 Phosphoglucose isomerase TSH58p_08205 PF08676 MutL C terminal dimerisation domain TSH58p_08205 PF01119 DNA mismatch repair protein, C-terminal domain TSH58p_08215 PF00364 Biotin-requiring enzyme TSH58p_08215 PF00561 alpha/beta hydrolase fold TSH58p_08220 PF02779 Transketolase, pyrimidine binding domain TSH58p_08220 PF02780 Transketolase, C-terminal domain TSH58p_08225 PF00676 Dehydrogenase E1 component TSH58p_08230 PF01513 ATP-NAD kinase TSH58p_08235 PF01590 GAF domain TSH58p_08235 PF02954 Bacterial regulatory protein, Fis family TSH58p_08235 PF00158 Sigma-54 interaction domain TSH58p_08240 PF00107 Zinc-binding dehydrogenase TSH58p_08240 PF08240 Alcohol dehydrogenase GroES-like domain TSH58p_08245 PF13193 AMP-binding enzyme C-terminal domain TSH58p_08245 PF00501 AMP-binding enzyme TSH58p_08250 PF13458 Periplasmic binding protein TSH58p_08255 PF00005 ABC transporter TSH58p_08260 PF12399 Branched-chain amino acid ATP-binding cassette transporter TSH58p_08260 PF00005 ABC transporter TSH58p_08265 PF02653 Branched-chain amino acid transport system / permease component TSH58p_08265 PF11862 Domain of unknown function (DUF3382) TSH58p_08270 PF02653 Branched-chain amino acid transport system / permease component TSH58p_08280 PF00440 Bacterial regulatory proteins, tetR family TSH58p_08280 PF18665 Tetracyclin repressor-like, C-terminal domain TSH58p_08295 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family TSH58p_08295 PF00356 Bacterial regulatory proteins, lacI family TSH58p_08300 PF04952 Succinylglutamate desuccinylase / Aspartoacylase family TSH58p_08305 PF01042 Endoribonuclease L-PSP TSH58p_08310 PF00497 Bacterial extracellular solute-binding proteins, family 3 TSH58p_08315 PF00005 ABC transporter TSH58p_08320 PF00528 Binding-protein-dependent transport system inner membrane component TSH58p_08325 PF00528 Binding-protein-dependent transport system inner membrane component TSH58p_08335 PF01979 Amidohydrolase family TSH58p_08350 PF00005 ABC transporter TSH58p_08360 PF09084 NMT1/THI5 like TSH58p_08370 PF01594 AI-2E family transporter TSH58p_08380 PF00873 AcrB/AcrD/AcrF family TSH58p_08390 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion TSH58p_08395 PF00871 Acetokinase family TSH58p_08400 PF01515 Phosphate acetyl/butaryl transferase TSH58p_08450 PF03976 Polyphosphate kinase 2 (PPK2) TSH58p_08465 PF00248 Aldo/keto reductase family TSH58p_08475 PF01370 NAD dependent epimerase/dehydratase family TSH58p_08485 PF13860 FlgD Ig-like domain TSH58p_08485 PF03963 Flagellar hook capping protein - N-terminal region TSH58p_08485 PF13861 FlgD Tudor-like domain TSH58p_08490 PF06429 Flagellar basal body rod FlgEFG protein C-terminal TSH58p_08490 PF07559 Flagellar basal body protein FlaE TSH58p_08490 PF00460 Flagella basal body rod protein TSH58p_08515 PF00700 Bacterial flagellin C-terminal helical region TSH58p_08515 PF00669 Bacterial flagellin N-terminal helical region TSH58p_08520 PF02465 Flagellar hook-associated protein 2 N-terminus TSH58p_08520 PF07195 Flagellar hook-associated protein 2 C-terminus TSH58p_08520 PF07196 Flagellin hook IN motif TSH58p_08550 PF00144 Beta-lactamase TSH58p_08565 PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase TSH58p_08570 PF00128 Alpha amylase, catalytic domain TSH58p_08570 PF16657 Maltogenic Amylase, C-terminal domain TSH58p_08585 PF00849 RNA pseudouridylate synthase TSH58p_08585 PF01479 S4 domain TSH58p_08590 PF07311 Dodecin TSH58p_08595 PF14437 MafB19-like deaminase TSH58p_08605 PF01071 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain TSH58p_08605 PF02844 Phosphoribosylglycinamide synthetase, N domain TSH58p_08605 PF02843 Phosphoribosylglycinamide synthetase, C domain TSH58p_08610 PF13742 OB-fold nucleic acid binding domain TSH58p_08610 PF02601 Exonuclease VII, large subunit TSH58p_08615 PF01979 Amidohydrolase family TSH58p_08620 PF03129 Anticodon binding domain TSH58p_08620 PF13393 Histidyl-tRNA synthetase TSH58p_08640 PF00210 Ferritin-like domain TSH58p_08645 PF00392 Bacterial regulatory proteins, gntR family TSH58p_08645 PF00155 Aminotransferase class I and II TSH58p_08665 PF02464 Competence-damaged protein TSH58p_08665 PF00994 Probable molybdopterin binding domain TSH58p_08670 PF03749 Sugar fermentation stimulation protein RE domain TSH58p_08670 PF17746 SfsA N-terminal OB domain TSH58p_08675 PF00557 Metallopeptidase family M24 TSH58p_08680 PF04002 RadC-like JAB domain TSH58p_08690 PF00990 Diguanylate cyclase, GGDEF domain TSH58p_08690 PF03707 Bacterial signalling protein N terminal repeat TSH58p_08690 PF00563 EAL domain TSH58p_08695 PF10397 Adenylosuccinate lyase C-terminus TSH58p_08695 PF00206 Lyase TSH58p_08710 PF01259 SAICAR synthetase TSH58p_08715 PF02700 Phosphoribosylformylglycinamidine (FGAM) synthase TSH58p_08720 PF12833 Helix-turn-helix domain TSH58p_08720 PF00730 HhH-GPD superfamily base excision DNA repair protein TSH58p_08720 PF06029 AlkA N-terminal domain TSH58p_08720 PF02805 Metal binding domain of Ada TSH58p_08725 PF03475 3-alpha domain TSH58p_08725 PF03473 MOSC domain TSH58p_08735 PF03466 LysR substrate binding domain TSH58p_08735 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family TSH58p_08745 PF00586 AIR synthase related protein, N-terminal domain TSH58p_08745 PF18072 Formylglycinamide ribonucleotide amidotransferase linker domain TSH58p_08745 PF02769 AIR synthase related protein, C-terminal domain TSH58p_08755 PF00462 Glutaredoxin TSH58p_08765 PF00892 EamA-like transporter family TSH58p_08775 PF00724 NADH:flavin oxidoreductase / NADH oxidase family TSH58p_08790 PF00163 Ribosomal protein S4/S9 N-terminal domain TSH58p_08790 PF01479 S4 domain TSH58p_08810 PF04397 LytTr DNA-binding domain TSH58p_08820 PF00682 HMGL-like TSH58p_08820 PF08502 LeuA allosteric (dimerisation) domain TSH58p_08830 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase TSH58p_08830 PF00672 HAMP domain TSH58p_08830 PF00512 His Kinase A (phospho-acceptor) domain TSH58p_08840 PF01757 Acyltransferase family TSH58p_08850 PF00989 PAS fold TSH58p_08850 PF00072 Response regulator receiver domain TSH58p_08850 PF00497 Bacterial extracellular solute-binding proteins, family 3 TSH58p_08850 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase TSH58p_08850 PF00512 His Kinase A (phospho-acceptor) domain TSH58p_08850 PF01627 Hpt domain TSH58p_08865 PF00205 Thiamine pyrophosphate enzyme, central domain TSH58p_08865 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain TSH58p_08865 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain TSH58p_08870 PF00749 tRNA synthetases class I (E and Q), catalytic domain TSH58p_08875 PF09190 DALR domain TSH58p_08875 PF01406 tRNA synthetases class I (C) catalytic domain TSH58p_08885 PF00171 Aldehyde dehydrogenase family TSH58p_08890 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family TSH58p_08890 PF03459 TOBE domain TSH58p_08895 PF00034 Cytochrome c TSH58p_08905 PF09335 SNARE associated Golgi protein TSH58p_08910 PF00106 short chain dehydrogenase TSH58p_08915 PF08032 RNA 2'-O ribose methyltransferase substrate binding TSH58p_08915 PF00588 SpoU rRNA Methylase family TSH58p_08925 PF01625 Peptide methionine sulfoxide reductase TSH58p_08945 PF01580 FtsK/SpoIIIE family TSH58p_08945 PF09397 Ftsk gamma domain TSH58p_08945 PF17854 FtsK alpha domain TSH58p_08945 PF13491 4TM region of DNA translocase FtsK/SpoIIIE TSH58p_08955 PF02308 MgtC family TSH58p_08970 PF02142 MGS-like domain TSH58p_08970 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain TSH58p_08970 PF02787 Carbamoyl-phosphate synthetase large chain, oligomerisation domain TSH58p_08975 PF01272 Transcription elongation factor, GreA/GreB, C-term TSH58p_08975 PF03449 Transcription elongation factor, N-terminal TSH58p_08985 PF01037 Lrp/AsnC ligand binding domain TSH58p_08990 PF06258 Mitochondrial fission ELM1 TSH58p_09005 PF07992 Pyridine nucleotide-disulphide oxidoreductase TSH58p_09015 PF00210 Ferritin-like domain TSH58p_09025 PF02558 Ketopantoate reductase PanE/ApbA TSH58p_09025 PF08546 Ketopantoate reductase PanE/ApbA C terminal TSH58p_09030 PF00009 Elongation factor Tu GTP binding domain TSH58p_09030 PF00679 Elongation factor G C-terminus TSH58p_09030 PF14492 Elongation Factor G, domain II TSH58p_09030 PF03764 Elongation factor G, domain IV TSH58p_09045 PF06965 Na+/H+ antiporter 1 TSH58p_09085 PF00528 Binding-protein-dependent transport system inner membrane component TSH58p_09090 PF00528 Binding-protein-dependent transport system inner membrane component TSH58p_09095 PF00005 ABC transporter TSH58p_09115 PF09084 NMT1/THI5 like TSH58p_09120 PF07690 Major Facilitator Superfamily TSH58p_09125 PF09084 NMT1/THI5 like TSH58p_09130 PF02910 Fumarate reductase flavoprotein C-term TSH58p_09130 PF00890 FAD binding domain TSH58p_09150 PF13477 Glycosyl transferase 4-like TSH58p_09150 PF00534 Glycosyl transferases group 1 TSH58p_09175 PF00905 Penicillin binding protein transpeptidase domain TSH58p_09175 PF00912 Transglycosylase TSH58p_09180 PF05198 Translation initiation factor IF-3, N-terminal domain TSH58p_09180 PF00707 Translation initiation factor IF-3, C-terminal domain TSH58p_09185 PF03129 Anticodon binding domain TSH58p_09185 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain TSH58p_09185 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) TSH58p_09185 PF02824 TGS domain TSH58p_09195 PF01180 Dihydroorotate dehydrogenase TSH58p_09225 PF12708 Pectate lyase superfamily protein TSH58p_09225 PF00353 RTX calcium-binding nonapeptide repeat (4 copies) TSH58p_09225 PF13229 Right handed beta helix region TSH58p_09260 PF03707 Bacterial signalling protein N terminal repeat TSH58p_09260 PF00990 Diguanylate cyclase, GGDEF domain TSH58p_09260 PF00563 EAL domain TSH58p_09310 PF01063 Amino-transferase class IV TSH58p_09320 PF13237 4Fe-4S dicluster domain TSH58p_09320 PF13085 2Fe-2S iron-sulfur cluster binding domain TSH58p_09325 PF00890 FAD binding domain TSH58p_09325 PF02910 Fumarate reductase flavoprotein C-term TSH58p_09335 PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit TSH58p_09345 PF02774 Semialdehyde dehydrogenase, dimerisation domain TSH58p_09345 PF01118 Semialdehyde dehydrogenase, NAD binding domain TSH58p_09355 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase TSH58p_09355 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase TSH58p_09370 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain TSH58p_09370 PF00672 HAMP domain TSH58p_09375 PF04204 Homoserine O-succinyltransferase TSH58p_09385 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain TSH58p_09385 PF00672 HAMP domain TSH58p_09395 PF00912 Transglycosylase TSH58p_09405 PF00893 Small Multidrug Resistance protein TSH58p_09410 PF01921 tRNA synthetases class I (K) TSH58p_09425 PF02866 lactate/malate dehydrogenase, alpha/beta C-terminal domain TSH58p_09425 PF00056 lactate/malate dehydrogenase, NAD binding domain TSH58p_09430 PF08442 ATP-grasp domain TSH58p_09430 PF00549 CoA-ligase TSH58p_09435 PF02629 CoA binding domain TSH58p_09435 PF00549 CoA-ligase TSH58p_09440 PF02779 Transketolase, pyrimidine binding domain TSH58p_09440 PF16870 2-oxoglutarate dehydrogenase C-terminal TSH58p_09440 PF00676 Dehydrogenase E1 component TSH58p_09440 PF16078 2-oxoglutarate dehydrogenase N-terminus TSH58p_09445 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) TSH58p_09445 PF02817 e3 binding domain TSH58p_09445 PF00364 Biotin-requiring enzyme TSH58p_09450 PF00512 His Kinase A (phospho-acceptor) domain TSH58p_09450 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase TSH58p_09455 PF00990 Diguanylate cyclase, GGDEF domain TSH58p_09460 PF03969 AFG1-like ATPase TSH58p_09470 PF03641 Possible lysine decarboxylase TSH58p_09475 PF08543 Phosphomethylpyrimidine kinase TSH58p_09480 PF03328 HpcH/HpaI aldolase/citrate lyase family TSH58p_09495 PF00180 Isocitrate/isopropylmalate dehydrogenase TSH58p_09500 PF00694 Aconitase C-terminal domain TSH58p_09525 PF01678 Diaminopimelate epimerase TSH58p_09530 PF04055 Radical SAM superfamily TSH58p_09530 PF00919 Uncharacterized protein family UPF0004 TSH58p_09535 PF02881 SRP54-type protein, helical bundle domain TSH58p_09535 PF00448 SRP54-type protein, GTPase domain TSH58p_09540 PF10423 Bacterial AMP nucleoside phosphorylase N-terminus TSH58p_09540 PF01048 Phosphorylase superfamily TSH58p_09550 PF04279 Intracellular septation protein A TSH58p_09565 PF00072 Response regulator receiver domain TSH58p_09565 PF00486 Transcriptional regulatory protein, C terminal TSH58p_09570 PF00929 Exonuclease TSH58p_09580 PF00989 PAS fold TSH58p_09580 PF00512 His Kinase A (phospho-acceptor) domain TSH58p_09580 PF16736 Single Cache-like TSH58p_09580 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase TSH58p_09590 PF00072 Response regulator receiver domain TSH58p_09595 PF01627 Hpt domain TSH58p_09595 PF02895 Signal transducing histidine kinase, homodimeric domain TSH58p_09595 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase TSH58p_09595 PF01584 CheW-like domain TSH58p_09600 PF01584 CheW-like domain TSH58p_09610 PF01739 CheR methyltransferase, SAM binding domain TSH58p_09610 PF03705 CheR methyltransferase, all-alpha domain TSH58p_09615 PF03975 CheD chemotactic sensory transduction TSH58p_09620 PF01339 CheB methylesterase TSH58p_09620 PF00072 Response regulator receiver domain TSH58p_09625 PF00672 HAMP domain TSH58p_09625 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain TSH58p_09630 PF01740 STAS domain TSH58p_09640 PF00072 Response regulator receiver domain TSH58p_09640 PF00990 Diguanylate cyclase, GGDEF domain TSH58p_09645 PF00486 Transcriptional regulatory protein, C terminal TSH58p_09645 PF00072 Response regulator receiver domain TSH58p_09665 PF00072 Response regulator receiver domain TSH58p_09665 PF00486 Transcriptional regulatory protein, C terminal TSH58p_09680 PF00512 His Kinase A (phospho-acceptor) domain TSH58p_09680 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase TSH58p_09685 PF00072 Response regulator receiver domain TSH58p_09685 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) TSH58p_09685 PF00512 His Kinase A (phospho-acceptor) domain TSH58p_09685 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase TSH58p_09685 PF00672 HAMP domain TSH58p_09685 PF01627 Hpt domain TSH58p_09700 PF01475 Ferric uptake regulator family TSH58p_09705 PF00271 Helicase conserved C-terminal domain TSH58p_09705 PF00270 DEAD/DEAH box helicase TSH58p_09720 PF02798 Glutathione S-transferase, N-terminal domain TSH58p_09720 PF00043 Glutathione S-transferase, C-terminal domain TSH58p_09725 PF08402 TOBE domain TSH58p_09725 PF00005 ABC transporter TSH58p_09730 PF00528 Binding-protein-dependent transport system inner membrane component TSH58p_09735 PF00528 Binding-protein-dependent transport system inner membrane component TSH58p_09740 PF13416 Bacterial extracellular solute-binding protein TSH58p_09750 PF00072 Response regulator receiver domain TSH58p_09750 PF09456 RcsC Alpha-Beta-Loop (ABL) TSH58p_09750 PF00512 His Kinase A (phospho-acceptor) domain TSH58p_09750 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase TSH58p_09760 PF07690 Major Facilitator Superfamily TSH58p_09765 PF02308 MgtC family TSH58p_09770 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain TSH58p_09770 PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain TSH58p_09800 PF03966 Trm112p-like protein TSH58p_09805 PF00004 ATPase family associated with various cellular activities (AAA) TSH58p_09805 PF05362 Lon protease (S16) C-terminal proteolytic domain TSH58p_09805 PF02190 ATP-dependent protease La (LON) substrate-binding domain TSH58p_09810 PF00085 Thioredoxin TSH58p_09815 PF04073 Aminoacyl-tRNA editing domain TSH58p_09825 PF03737 Aldolase/RraA TSH58p_09830 PF03547 Membrane transport protein TSH58p_09840 PF00672 HAMP domain TSH58p_09840 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain TSH58p_09850 PF00672 HAMP domain TSH58p_09850 PF01966 HD domain TSH58p_09855 PF05088 Bacterial NAD-glutamate dehydrogenase TSH58p_09885 PF01808 AICARFT/IMPCHase bienzyme TSH58p_09885 PF02142 MGS-like domain TSH58p_09895 PF01189 16S rRNA methyltransferase RsmB/F TSH58p_09895 PF01029 NusB family TSH58p_09910 PF01435 Peptidase family M48 TSH58p_09915 PF07896 Protein of unknown function (DUF1674) TSH58p_09930 PF00501 AMP-binding enzyme TSH58p_09930 PF13193 AMP-binding enzyme C-terminal domain TSH58p_09930 PF16177 Acetyl-coenzyme A synthetase N-terminus TSH58p_09945 PF03795 YCII-related domain TSH58p_09950 PF07479 NAD-dependent glycerol-3-phosphate dehydrogenase C-terminus TSH58p_09950 PF01210 NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus TSH58p_09960 PF00814 Glycoprotease family TSH58p_09965 PF05958 tRNA (Uracil-5-)-methyltransferase TSH58p_09970 PF03900 Porphobilinogen deaminase, C-terminal domain TSH58p_09970 PF01379 Porphobilinogen deaminase, dipyromethane cofactor binding domain TSH58p_10000 PF13180 PDZ domain TSH58p_10000 PF00595 PDZ domain TSH58p_10030 PF00691 OmpA family TSH58p_10030 PF13488 Glycine zipper TSH58p_10035 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain TSH58p_10040 PF13091 PLD-like domain TSH58p_10040 PF13396 Phospholipase_D-nuclease N-terminal TSH58p_10050 PF00497 Bacterial extracellular solute-binding proteins, family 3 TSH58p_10050 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase TSH58p_10050 PF00512 His Kinase A (phospho-acceptor) domain TSH58p_10055 PF07722 Peptidase C26 TSH58p_10065 PF13188 PAS domain TSH58p_10065 PF08448 PAS fold TSH58p_10065 PF00512 His Kinase A (phospho-acceptor) domain TSH58p_10065 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase TSH58p_10065 PF00072 Response regulator receiver domain TSH58p_10075 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase TSH58p_10075 PF16767 Sensor domain of alginate biosynthesis sensor protein KinB TSH58p_10075 PF08448 PAS fold TSH58p_10075 PF00672 HAMP domain TSH58p_10075 PF00512 His Kinase A (phospho-acceptor) domain TSH58p_10090 PF00528 Binding-protein-dependent transport system inner membrane component TSH58p_10095 PF00005 ABC transporter TSH58p_10120 PF04379 ApaG domain TSH58p_10125 PF01227 GTP cyclohydrolase I TSH58p_10135 PF04073 Aminoacyl-tRNA editing domain TSH58p_10150 PF00005 ABC transporter TSH58p_10150 PF08352 Oligopeptide/dipeptide transporter, C-terminal region TSH58p_10155 PF08352 Oligopeptide/dipeptide transporter, C-terminal region TSH58p_10155 PF00005 ABC transporter TSH58p_10165 PF00528 Binding-protein-dependent transport system inner membrane component TSH58p_10170 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle TSH58p_10190 PF04655 Aminoglycoside/hydroxyurea antibiotic resistance kinase TSH58p_10200 PF03707 Bacterial signalling protein N terminal repeat TSH58p_10200 PF00563 EAL domain TSH58p_10200 PF00990 Diguanylate cyclase, GGDEF domain TSH58p_10230 PF01569 PAP2 superfamily TSH58p_10240 PF11849 Domain of unknown function (DUF3369) TSH58p_10255 PF04024 PspC domain TSH58p_10260 PF06667 Phage shock protein B TSH58p_10265 PF04012 PspA/IM30 family TSH58p_10270 PF02954 Bacterial regulatory protein, Fis family TSH58p_10270 PF00158 Sigma-54 interaction domain TSH58p_10280 PF00905 Penicillin binding protein transpeptidase domain TSH58p_10280 PF00912 Transglycosylase TSH58p_10295 PF03264 NapC/NirT cytochrome c family, N-terminal region TSH58p_10300 PF00034 Cytochrome c TSH58p_10300 PF03150 Di-haem cytochrome c peroxidase TSH58p_10305 PF00199 Catalase TSH58p_10305 PF06628 Catalase-related immune-responsive TSH58p_10310 PF00118 TCP-1/cpn60 chaperonin family TSH58p_10315 PF00166 Chaperonin 10 Kd subunit TSH58p_10320 PF06233 Usg-like family TSH58p_10325 PF00959 Phage lysozyme TSH58p_10330 PF07992 Pyridine nucleotide-disulphide oxidoreductase TSH58p_10335 PF02628 Cytochrome oxidase assembly protein TSH58p_10365 PF08352 Oligopeptide/dipeptide transporter, C-terminal region TSH58p_10365 PF00005 ABC transporter TSH58p_10370 PF00924 Mechanosensitive ion channel TSH58p_10380 PF00005 ABC transporter TSH58p_10385 PF13472 GDSL-like Lipase/Acylhydrolase family TSH58p_10390 PF10442 FIST C domain TSH58p_10390 PF08495 FIST N domain TSH58p_10395 PF00248 Aldo/keto reductase family TSH58p_10400 PF02834 LigT like Phosphoesterase TSH58p_10405 PF01494 FAD binding domain TSH58p_10410 PF00543 Nitrogen regulatory protein P-II TSH58p_10420 PF17854 FtsK alpha domain TSH58p_10420 PF13491 4TM region of DNA translocase FtsK/SpoIIIE TSH58p_10420 PF01580 FtsK/SpoIIIE family TSH58p_10435 PF13335 Magnesium chelatase, subunit ChlI C-terminal TSH58p_10435 PF01078 Magnesium chelatase, subunit ChlI TSH58p_10440 PF02633 Creatinine amidohydrolase TSH58p_10445 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle TSH58p_10450 PF00528 Binding-protein-dependent transport system inner membrane component TSH58p_10455 PF12911 N-terminal TM domain of oligopeptide transport permease C TSH58p_10455 PF00528 Binding-protein-dependent transport system inner membrane component TSH58p_10460 PF00156 Phosphoribosyl transferase domain TSH58p_10495 PF00092 von Willebrand factor type A domain TSH58p_10495 PF12034 Domain of unknown function (DUF3520) TSH58p_10495 PF12450 von Willebrand factor TSH58p_10505 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain TSH58p_10510 PF17147 Pyruvate:ferredoxin oxidoreductase core domain II TSH58p_10510 PF01558 Pyruvate ferredoxin/flavodoxin oxidoreductase TSH58p_10510 PF01855 Pyruvate flavodoxin/ferredoxin oxidoreductase, thiamine diP-bdg TSH58p_10515 PF00174 Oxidoreductase molybdopterin binding domain TSH58p_10525 PF00512 His Kinase A (phospho-acceptor) domain TSH58p_10525 PF00989 PAS fold TSH58p_10525 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase TSH58p_10530 PF01965 DJ-1/PfpI family TSH58p_10535 PF00463 Isocitrate lyase family TSH58p_10540 PF06114 IrrE N-terminal-like domain TSH58p_10540 PF01381 Helix-turn-helix TSH58p_10540 PF09856 Predicted transcriptional regulator (DUF2083) TSH58p_10545 PF00970 Oxidoreductase FAD-binding domain TSH58p_10545 PF00175 Oxidoreductase NAD-binding domain TSH58p_10555 PF00156 Phosphoribosyl transferase domain TSH58p_10560 PF11849 Domain of unknown function (DUF3369) TSH58p_10565 PF17151 Periplasmic sensor domain TSH58p_10565 PF00990 Diguanylate cyclase, GGDEF domain TSH58p_10570 PF01556 DnaJ C terminal domain TSH58p_10570 PF00684 DnaJ central domain TSH58p_10570 PF00226 DnaJ domain TSH58p_10575 PF00012 Hsp70 protein TSH58p_10595 PF08447 PAS fold TSH58p_10595 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain TSH58p_10595 PF13426 PAS domain TSH58p_10600 PF00072 Response regulator receiver domain TSH58p_10605 PF01025 GrpE TSH58p_10610 PF01628 HrcA protein C terminal domain TSH58p_10615 PF03725 3' exoribonuclease family, domain 2 TSH58p_10615 PF01138 3' exoribonuclease family, domain 1 TSH58p_10620 PF01725 Ham1 family TSH58p_10625 PF04055 Radical SAM superfamily TSH58p_10625 PF06969 HemN C-terminal domain TSH58p_10630 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain TSH58p_10630 PF17200 Single Cache domain 2 TSH58p_10630 PF00672 HAMP domain TSH58p_10635 PF00186 Dihydrofolate reductase TSH58p_10645 PF16363 GDP-mannose 4,6 dehydratase TSH58p_10650 PF02951 Prokaryotic glutathione synthetase, N-terminal domain TSH58p_10650 PF02955 Prokaryotic glutathione synthetase, ATP-grasp domain TSH58p_10655 PF13369 Transglutaminase-like superfamily TSH58p_10660 PF02021 Uncharacterised protein family UPF0102 TSH58p_10665 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases TSH58p_10680 PF01053 Cys/Met metabolism PLP-dependent enzyme TSH58p_10685 PF01740 STAS domain TSH58p_10695 PF01624 MutS domain I TSH58p_10695 PF05192 MutS domain III TSH58p_10695 PF05190 MutS family domain IV TSH58p_10695 PF00488 MutS domain V TSH58p_10695 PF05188 MutS domain II TSH58p_10710 PF08335 GlnD PII-uridylyltransferase TSH58p_10710 PF01909 Nucleotidyltransferase domain TSH58p_10710 PF01966 HD domain TSH58p_10735 PF13458 Periplasmic binding protein TSH58p_10745 PF03023 Lipid II flippase MurJ TSH58p_10750 PF00579 tRNA synthetases class I (W and Y) TSH58p_10755 PF01470 Pyroglutamyl peptidase TSH58p_10765 PF02810 SEC-C motif TSH58p_10780 PF00132 Bacterial transferase hexapeptide (six repeats) TSH58p_10785 PF00440 Bacterial regulatory proteins, tetR family TSH58p_10805 PF17284 Spermidine synthase tetramerisation domain TSH58p_10810 PF02675 S-adenosylmethionine decarboxylase TSH58p_10815 PF07722 Peptidase C26 TSH58p_10820 PF12802 MarR family TSH58p_10825 PF01557 Fumarylacetoacetate (FAA) hydrolase family TSH58p_10835 PF00300 Histidine phosphatase superfamily (branch 1) TSH58p_10840 PF00534 Glycosyl transferases group 1 TSH58p_10840 PF13439 Glycosyltransferase Family 4 TSH58p_10845 PF08448 PAS fold TSH58p_10845 PF00990 Diguanylate cyclase, GGDEF domain TSH58p_10850 PF13439 Glycosyltransferase Family 4 TSH58p_10850 PF00534 Glycosyl transferases group 1 TSH58p_10860 PF00005 ABC transporter TSH58p_10860 PF00664 ABC transporter transmembrane region TSH58p_10865 PF00027 Cyclic nucleotide-binding domain TSH58p_10865 PF13302 Acetyltransferase (GNAT) domain TSH58p_10885 PF08352 Oligopeptide/dipeptide transporter, C-terminal region TSH58p_10885 PF00005 ABC transporter TSH58p_10895 PF00528 Binding-protein-dependent transport system inner membrane component TSH58p_10900 PF12911 N-terminal TM domain of oligopeptide transport permease C TSH58p_10900 PF00528 Binding-protein-dependent transport system inner membrane component TSH58p_10910 PF12706 Beta-lactamase superfamily domain TSH58p_10920 PF07995 Glucose / Sorbosone dehydrogenase TSH58p_10930 PF00486 Transcriptional regulatory protein, C terminal TSH58p_10930 PF00072 Response regulator receiver domain TSH58p_10940 PF00925 GTP cyclohydrolase II TSH58p_10955 PF01168 Alanine racemase, N-terminal domain TSH58p_10980 PF00133 tRNA synthetases class I (I, L, M and V) TSH58p_10980 PF08264 Anticodon-binding domain of tRNA TSH58p_10980 PF13603 Leucyl-tRNA synthetase, Domain 2 TSH58p_11000 PF17762 HTH domain found in ParB protein TSH58p_11000 PF02195 ParB-like nuclease domain TSH58p_11005 PF13614 AAA domain TSH58p_11010 PF02527 rRNA small subunit methyltransferase G TSH58p_11015 PF01134 Glucose inhibited division protein A TSH58p_11015 PF13932 GidA associated domain TSH58p_11020 PF10396 GTP-binding protein TrmE N-terminus TSH58p_11020 PF01926 50S ribosome-binding GTPase TSH58p_11020 PF12631 MnmE helical domain TSH58p_11035 PF03190 Protein of unknown function, DUF255 TSH58p_11040 PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain TSH58p_11040 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain TSH58p_11045 PF00107 Zinc-binding dehydrogenase TSH58p_11045 PF08240 Alcohol dehydrogenase GroES-like domain TSH58p_11050 PF00929 Exonuclease TSH58p_11055 PF01121 Dephospho-CoA kinase TSH58p_11060 PF01488 Shikimate / quinate 5-dehydrogenase TSH58p_11060 PF08501 Shikimate dehydrogenase substrate binding domain TSH58p_11060 PF18317 Shikimate 5'-dehydrogenase C-terminal domain TSH58p_11065 PF02545 Maf-like protein TSH58p_11070 PF03618 Kinase/pyrophosphorylase TSH58p_11075 PF01208 Uroporphyrinogen decarboxylase (URO-D) TSH58p_11085 PF00689 Cation transporting ATPase, C-terminus TSH58p_11085 PF00690 Cation transporter/ATPase, N-terminus TSH58p_11090 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain TSH58p_11090 PF07498 Rho termination factor, N-terminal domain TSH58p_11090 PF07497 Rho termination factor, RNA-binding domain TSH58p_11095 PF02556 Preprotein translocase subunit SecB TSH58p_11100 PF04186 FxsA cytoplasmic membrane protein TSH58p_11105 PF04280 Tim44-like domain TSH58p_11110 PF03562 MltA specific insert domain TSH58p_11110 PF06725 3D domain TSH58p_11120 PF01230 HIT domain TSH58p_11125 PF01503 Phosphoribosyl-ATP pyrophosphohydrolase TSH58p_11130 PF00977 Histidine biosynthesis protein TSH58p_11135 PF00977 Histidine biosynthesis protein TSH58p_11140 PF00583 Acetyltransferase (GNAT) family TSH58p_11145 PF00117 Glutamine amidotransferase class-I TSH58p_11150 PF00475 Imidazoleglycerol-phosphate dehydratase TSH58p_11160 PF00227 Proteasome subunit TSH58p_11165 PF07724 AAA domain (Cdc48 subfamily) TSH58p_11165 PF00004 ATPase family associated with various cellular activities (AAA) TSH58p_11165 PF10431 C-terminal, D2-small domain, of ClpB protein TSH58p_11175 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase TSH58p_11175 PF00512 His Kinase A (phospho-acceptor) domain TSH58p_11175 PF00989 PAS fold TSH58p_11175 PF13426 PAS domain TSH58p_11175 PF13188 PAS domain TSH58p_11195 PF02589 LUD domain TSH58p_11195 PF11870 Domain of unknown function (DUF3390) TSH58p_11195 PF13183 4Fe-4S dicluster domain TSH58p_11200 PF02754 Cysteine-rich domain TSH58p_11205 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain TSH58p_11205 PF16591 Helical bimodular sensor domain TSH58p_11205 PF00672 HAMP domain TSH58p_11220 PF00950 ABC 3 transport family TSH58p_11225 PF00005 ABC transporter TSH58p_11230 PF01297 Zinc-uptake complex component A periplasmic TSH58p_11235 PF01113 Dihydrodipicolinate reductase, N-terminus TSH58p_11235 PF05173 Dihydrodipicolinate reductase, C-terminus TSH58p_11240 PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain TSH58p_11240 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain TSH58p_11250 PF00633 Helix-hairpin-helix motif TSH58p_11250 PF00730 HhH-GPD superfamily base excision DNA repair protein TSH58p_11250 PF10576 Iron-sulfur binding domain of endonuclease III TSH58p_11265 PF00294 pfkB family carbohydrate kinase TSH58p_11270 PF01925 Sulfite exporter TauE/SafE TSH58p_11290 PF00672 HAMP domain TSH58p_11290 PF00211 Adenylate and Guanylate cyclase catalytic domain TSH58p_11295 PF01106 NifU-like domain TSH58p_11305 PF01427 D-ala-D-ala dipeptidase TSH58p_11325 PF05443 ROS/MUCR transcriptional regulator protein TSH58p_11340 PF01938 TRAM domain TSH58p_11340 PF04055 Radical SAM superfamily TSH58p_11340 PF00919 Uncharacterized protein family UPF0004 TSH58p_11345 PF02562 PhoH-like protein TSH58p_11350 PF02130 Uncharacterized protein family UPF0054 TSH58p_11355 PF03471 Transporter associated domain TSH58p_11355 PF00571 CBS domain TSH58p_11360 PF00795 Carbon-nitrogen hydrolase TSH58p_11365 PF01381 Helix-turn-helix TSH58p_11370 PF02772 S-adenosylmethionine synthetase, central domain TSH58p_11370 PF00438 S-adenosylmethionine synthetase, N-terminal domain TSH58p_11370 PF02773 S-adenosylmethionine synthetase, C-terminal domain TSH58p_11375 PF02390 Putative methyltransferase TSH58p_11380 PF03992 Antibiotic biosynthesis monooxygenase TSH58p_11385 PF02576 RimP N-terminal domain TSH58p_11385 PF17384 RimP C-terminal SH3 domain TSH58p_11390 PF00575 S1 RNA binding domain TSH58p_11390 PF08529 NusA N-terminal domain TSH58p_11390 PF13184 NusA-like KH domain TSH58p_11400 PF08364 Bacterial translation initiation factor IF-2 associated region TSH58p_11400 PF04760 Translation initiation factor IF-2, N-terminal region TSH58p_11400 PF11987 Translation-initiation factor 2 TSH58p_11400 PF00009 Elongation factor Tu GTP binding domain TSH58p_11400 PF03144 Elongation factor Tu domain 2 TSH58p_11405 PF02033 Ribosome-binding factor A TSH58p_11410 PF16198 tRNA pseudouridylate synthase B C-terminal domain TSH58p_11410 PF01509 TruB family pseudouridylate synthase (N terminal domain) TSH58p_11415 PF00312 Ribosomal protein S15 TSH58p_11420 PF00575 S1 RNA binding domain TSH58p_11420 PF03725 3' exoribonuclease family, domain 2 TSH58p_11420 PF01138 3' exoribonuclease family, domain 1 TSH58p_11420 PF03726 Polyribonucleotide nucleotidyltransferase, RNA binding domain TSH58p_11420 PF00013 KH domain TSH58p_11435 PF04228 Putative neutral zinc metallopeptidase TSH58p_11445 PF04055 Radical SAM superfamily TSH58p_11445 PF12544 Lysine-2,3-aminomutase TSH58p_11450 PF03009 Glycerophosphoryl diester phosphodiesterase family TSH58p_11465 PF02915 Rubrerythrin TSH58p_11480 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain TSH58p_11480 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain TSH58p_11485 PF13380 CoA binding domain TSH58p_11485 PF00583 Acetyltransferase (GNAT) family TSH58p_11485 PF13607 Succinyl-CoA ligase like flavodoxin domain TSH58p_11490 PF00056 lactate/malate dehydrogenase, NAD binding domain TSH58p_11490 PF02866 lactate/malate dehydrogenase, alpha/beta C-terminal domain TSH58p_11495 PF00719 Inorganic pyrophosphatase TSH58p_11500 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle TSH58p_11510 PF03109 ABC1 family TSH58p_11515 PF01209 ubiE/COQ5 methyltransferase family TSH58p_11525 PF06831 Formamidopyrimidine-DNA glycosylase H2TH domain TSH58p_11525 PF01149 Formamidopyrimidine-DNA glycosylase N-terminal domain TSH58p_11535 PF00378 Enoyl-CoA hydratase/isomerase TSH58p_11540 PF01649 Ribosomal protein S20 TSH58p_11545 PF00308 Bacterial dnaA protein TSH58p_11545 PF08299 Bacterial dnaA protein helix-turn-helix TSH58p_11545 PF11638 DnaA N-terminal domain TSH58p_11550 PF17158 Membrane-associated sensor, integral membrane domain TSH58p_11550 PF00990 Diguanylate cyclase, GGDEF domain TSH58p_11555 PF13416 Bacterial extracellular solute-binding protein TSH58p_11560 PF00005 ABC transporter TSH58p_11560 PF08402 TOBE domain TSH58p_11565 PF05425 Copper resistance protein D TSH58p_11580 PF00528 Binding-protein-dependent transport system inner membrane component TSH58p_11585 PF00528 Binding-protein-dependent transport system inner membrane component TSH58p_11600 PF00394 Multicopper oxidase TSH58p_11600 PF07731 Multicopper oxidase TSH58p_11600 PF07732 Multicopper oxidase TSH58p_11600 PF10518 TAT (twin-arginine translocation) pathway signal sequence TSH58p_11605 PF05958 tRNA (Uracil-5-)-methyltransferase TSH58p_11610 PF17785 PUA-like domain TSH58p_11610 PF10672 S-adenosylmethionine-dependent methyltransferase TSH58p_11620 PF00115 Cytochrome C and Quinol oxidase polypeptide I TSH58p_11635 PF13442 Cytochrome C oxidase, cbb3-type, subunit III TSH58p_11635 PF14715 N-terminal domain of cytochrome oxidase-cbb3, FixP TSH58p_11635 PF00034 Cytochrome c TSH58p_11640 PF11614 IG-like fold at C-terminal of FixG, putative oxidoreductase TSH58p_11640 PF13746 4Fe-4S dicluster domain TSH58p_11640 PF12801 4Fe-4S binding domain TSH58p_11650 PF00403 Heavy-metal-associated domain TSH58p_11655 PF03597 Cytochrome oxidase maturation protein cbb3-type TSH58p_11660 PF13545 Crp-like helix-turn-helix domain TSH58p_11660 PF00027 Cyclic nucleotide-binding domain TSH58p_11665 PF03949 Malic enzyme, NAD binding domain TSH58p_11665 PF00390 Malic enzyme, N-terminal domain TSH58p_11665 PF01515 Phosphate acetyl/butaryl transferase TSH58p_11670 PF00989 PAS fold TSH58p_11670 PF00512 His Kinase A (phospho-acceptor) domain TSH58p_11670 PF16736 Single Cache-like TSH58p_11670 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase TSH58p_11675 PF12849 PBP superfamily domain TSH58p_11680 PF00528 Binding-protein-dependent transport system inner membrane component TSH58p_11685 PF00528 Binding-protein-dependent transport system inner membrane component TSH58p_11690 PF00005 ABC transporter TSH58p_11695 PF01895 PhoU domain TSH58p_11700 PF00486 Transcriptional regulatory protein, C terminal TSH58p_11700 PF00072 Response regulator receiver domain TSH58p_11715 PF00899 ThiF family TSH58p_11725 PF00291 Pyridoxal-phosphate dependent enzyme TSH58p_11730 PF02082 Transcriptional regulator TSH58p_11735 PF00692 dUTPase TSH58p_11740 PF04127 DNA / pantothenate metabolism flavoprotein TSH58p_11740 PF02441 Flavoprotein TSH58p_11745 PF00072 Response regulator receiver domain TSH58p_11745 PF00158 Sigma-54 interaction domain TSH58p_11745 PF02954 Bacterial regulatory protein, Fis family TSH58p_11750 PF00313 'Cold-shock' DNA-binding domain TSH58p_11755 PF01627 Hpt domain TSH58p_11755 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase TSH58p_11755 PF00512 His Kinase A (phospho-acceptor) domain TSH58p_11755 PF00672 HAMP domain TSH58p_11755 PF00072 Response regulator receiver domain TSH58p_11755 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) TSH58p_11760 PF00950 ABC 3 transport family TSH58p_11765 PF00950 ABC 3 transport family TSH58p_11770 PF00005 ABC transporter TSH58p_11775 PF01297 Zinc-uptake complex component A periplasmic TSH58p_11800 PF01475 Ferric uptake regulator family TSH58p_11810 PF13188 PAS domain TSH58p_11810 PF00989 PAS fold TSH58p_11810 PF00512 His Kinase A (phospho-acceptor) domain TSH58p_11810 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase TSH58p_11815 PF00183 Hsp90 protein TSH58p_11830 PF01479 S4 domain TSH58p_11835 PF03741 Integral membrane protein TerC family TSH58p_11835 PF03471 Transporter associated domain TSH58p_11850 PF06779 Uncharacterised MFS-type transporter YbfB TSH58p_11855 PF03466 LysR substrate binding domain TSH58p_11855 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family TSH58p_11860 PF11953 Domain of unknown function (DUF3470) TSH58p_11860 PF00037 4Fe-4S binding domain TSH58p_11875 PF04545 Sigma-70, region 4 TSH58p_11875 PF04542 Sigma-70 region 2 TSH58p_11875 PF00140 Sigma-70 factor, region 1.2 TSH58p_11880 PF00211 Adenylate and Guanylate cyclase catalytic domain TSH58p_11880 PF00672 HAMP domain TSH58p_11880 PF02743 Cache domain TSH58p_11885 PF01435 Peptidase family M48 TSH58p_11895 PF00561 alpha/beta hydrolase fold TSH58p_11900 PF01632 Ribosomal protein L35 TSH58p_11905 PF00453 Ribosomal protein L20 TSH58p_11910 PF02912 Aminoacyl tRNA synthetase class II, N-terminal domain TSH58p_11910 PF01409 tRNA synthetases class II core domain (F) TSH58p_11915 PF17759 Phenylalanyl tRNA synthetase beta chain CLM domain TSH58p_11915 PF01588 Putative tRNA binding domain TSH58p_11915 PF03484 tRNA synthetase B5 domain TSH58p_11915 PF03483 B3/4 domain TSH58p_11915 PF03147 Ferredoxin-fold anticodon binding domain TSH58p_11925 PF11849 Domain of unknown function (DUF3369) TSH58p_11935 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family TSH58p_11935 PF03466 LysR substrate binding domain TSH58p_11945 PF03144 Elongation factor Tu domain 2 TSH58p_11945 PF00009 Elongation factor Tu GTP binding domain TSH58p_11945 PF06421 GTP-binding protein LepA C-terminus TSH58p_11945 PF00679 Elongation factor G C-terminus TSH58p_11955 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain TSH58p_11955 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain TSH58p_11955 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain TSH58p_11960 PF08323 Starch synthase catalytic domain TSH58p_11960 PF00534 Glycosyl transferases group 1 TSH58p_11965 PF00483 Nucleotidyl transferase TSH58p_11970 PF00909 Ammonium Transporter Family TSH58p_11980 PF06445 GyrI-like small molecule binding domain TSH58p_12000 PF12973 ChrR Cupin-like domain TSH58p_12005 PF04542 Sigma-70 region 2 TSH58p_12005 PF04545 Sigma-70, region 4 TSH58p_12015 PF04055 Radical SAM superfamily TSH58p_12030 PF00764 Arginosuccinate synthase TSH58p_12035 PF00672 HAMP domain TSH58p_12035 PF12729 Four helix bundle sensory module for signal transduction TSH58p_12035 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain TSH58p_12050 PF06803 Protein of unknown function (DUF1232) TSH58p_12055 PF00892 EamA-like transporter family TSH58p_12065 PF03918 Cytochrome C biogenesis protein TSH58p_12070 PF08534 Redoxin TSH58p_12075 PF16327 Cytochrome c-type biogenesis protein CcmF C-terminal TSH58p_12075 PF01578 Cytochrome C assembly protein TSH58p_12080 PF03100 CcmE TSH58p_12090 PF01578 Cytochrome C assembly protein TSH58p_12100 PF00528 Binding-protein-dependent transport system inner membrane component TSH58p_12105 PF00528 Binding-protein-dependent transport system inner membrane component TSH58p_12110 PF00497 Bacterial extracellular solute-binding proteins, family 3 TSH58p_12115 PF00005 ABC transporter TSH58p_12120 PF06826 Predicted Permease Membrane Region TSH58p_12120 PF02080 TrkA-C domain TSH58p_12125 PF02080 TrkA-C domain TSH58p_12125 PF06826 Predicted Permease Membrane Region TSH58p_12130 PF00005 ABC transporter TSH58p_12135 PF03379 CcmB protein TSH58p_12140 PF04471 Restriction endonuclease TSH58p_12140 PF14338 Mrr N-terminal domain TSH58p_12150 PF02325 YGGT family TSH58p_12155 PF02594 Uncharacterised ACR, YggU family COG1872 TSH58p_12160 PF02882 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain TSH58p_12160 PF00763 Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain TSH58p_12165 PF01544 CorA-like Mg2+ transporter protein TSH58p_12170 PF01729 Quinolinate phosphoribosyl transferase, C-terminal domain TSH58p_12170 PF02749 Quinolinate phosphoribosyl transferase, N-terminal domain TSH58p_12175 PF01329 Pterin 4 alpha carbinolamine dehydratase TSH58p_12185 PF03167 Uracil DNA glycosylase superfamily TSH58p_12190 PF02146 Sir2 family TSH58p_12195 PF01451 Low molecular weight phosphotyrosine protein phosphatase TSH58p_12210 PF03466 LysR substrate binding domain TSH58p_12210 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family TSH58p_12215 PF00085 Thioredoxin TSH58p_12220 PF00580 UvrD/REP helicase N-terminal domain TSH58p_12220 PF12705 PD-(D/E)XK nuclease superfamily TSH58p_12220 PF13361 UvrD-like helicase C-terminal domain TSH58p_12225 PF12705 PD-(D/E)XK nuclease superfamily TSH58p_12230 PF12804 MobA-like NTP transferase domain TSH58p_12240 PF02367 Threonylcarbamoyl adenosine biosynthesis protein TsaE TSH58p_12250 PF07992 Pyridine nucleotide-disulphide oxidoreductase TSH58p_12260 PF00486 Transcriptional regulatory protein, C terminal TSH58p_12260 PF00072 Response regulator receiver domain TSH58p_12265 PF00512 His Kinase A (phospho-acceptor) domain TSH58p_12265 PF00672 HAMP domain TSH58p_12265 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase TSH58p_12270 PF07992 Pyridine nucleotide-disulphide oxidoreductase TSH58p_12275 PF00512 His Kinase A (phospho-acceptor) domain TSH58p_12275 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase TSH58p_12280 PF00512 His Kinase A (phospho-acceptor) domain TSH58p_12280 PF00672 HAMP domain TSH58p_12280 PF00072 Response regulator receiver domain TSH58p_12280 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) TSH58p_12280 PF01627 Hpt domain TSH58p_12280 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase TSH58p_12285 PF00497 Bacterial extracellular solute-binding proteins, family 3 TSH58p_12290 PF00291 Pyridoxal-phosphate dependent enzyme TSH58p_12295 PF00290 Tryptophan synthase alpha chain TSH58p_12300 PF01039 Carboxyl transferase domain TSH58p_12300 PF17848 Acetyl-coA carboxylase zinc finger domain TSH58p_12305 PF08245 Mur ligase middle domain TSH58p_12305 PF02875 Mur ligase family, glutamate ligase domain TSH58p_12335 PF13426 PAS domain TSH58p_12335 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase TSH58p_12335 PF00989 PAS fold TSH58p_12335 PF00512 His Kinase A (phospho-acceptor) domain TSH58p_12335 PF13188 PAS domain TSH58p_12340 PF01227 GTP cyclohydrolase I TSH58p_12370 PF00313 'Cold-shock' DNA-binding domain TSH58p_12375 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I TSH58p_12375 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain TSH58p_12375 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III TSH58p_12375 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II TSH58p_12380 PF01738 Dienelactone hydrolase family TSH58p_12385 PF01641 SelR domain TSH58p_12390 PF00296 Luciferase-like monooxygenase TSH58p_12420 PF03480 Bacterial extracellular solute-binding protein, family 7 TSH58p_12430 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component TSH58p_12455 PF00271 Helicase conserved C-terminal domain TSH58p_12455 PF00270 DEAD/DEAH box helicase TSH58p_12455 PF00570 HRDC domain TSH58p_12455 PF16124 RecQ zinc-binding TSH58p_12455 PF09382 RQC domain TSH58p_12460 PF00293 NUDIX domain TSH58p_12470 PF01960 ArgJ family TSH58p_12480 PF01043 SecA preprotein cross-linking domain TSH58p_12480 PF07516 SecA Wing and Scaffold domain TSH58p_12480 PF07517 SecA DEAD-like domain TSH58p_12480 PF02810 SEC-C motif TSH58p_12485 PF01741 Large-conductance mechanosensitive channel, MscL TSH58p_12490 PF00270 DEAD/DEAH box helicase TSH58p_12490 PF00271 Helicase conserved C-terminal domain TSH58p_12495 PF03186 CobD/Cbib protein TSH58p_12520 PF01313 Bacterial export proteins, family 3 TSH58p_12525 PF13793 N-terminal domain of ribose phosphate pyrophosphokinase TSH58p_12525 PF14572 Phosphoribosyl synthetase-associated domain TSH58p_12530 PF00462 Glutaredoxin TSH58p_12535 PF00795 Carbon-nitrogen hydrolase TSH58p_12540 PF02659 Putative manganese efflux pump TSH58p_12555 PF04341 Protein of unknown function, DUF485 TSH58p_12560 PF00474 Sodium:solute symporter family TSH58p_12575 PF07568 Histidine kinase TSH58p_12575 PF12282 Signal transduction histidine kinase TSH58p_12575 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase TSH58p_12580 PF01008 Initiation factor 2 subunit family TSH58p_12590 PF00171 Aldehyde dehydrogenase family TSH58p_12595 PF01593 Flavin containing amine oxidoreductase TSH58p_12600 PF01593 Flavin containing amine oxidoreductase TSH58p_12610 PF00535 Glycosyl transferase family 2 TSH58p_12640 PF00694 Aconitase C-terminal domain TSH58p_12640 PF00330 Aconitase family (aconitate hydratase) TSH58p_12645 PF01757 Acyltransferase family TSH58p_12665 PF00011 Hsp20/alpha crystallin family TSH58p_12675 PF00535 Glycosyl transferase family 2 TSH58p_12680 PF00512 His Kinase A (phospho-acceptor) domain TSH58p_12680 PF17149 Periplasmic sensor domain found in signal transduction proteins TSH58p_12680 PF00672 HAMP domain TSH58p_12680 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase TSH58p_12680 PF00072 Response regulator receiver domain TSH58p_12680 PF01627 Hpt domain TSH58p_12685 PF00072 Response regulator receiver domain TSH58p_12685 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase TSH58p_12685 PF00512 His Kinase A (phospho-acceptor) domain TSH58p_12685 PF00672 HAMP domain TSH58p_12685 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) TSH58p_12685 PF01627 Hpt domain TSH58p_12690 PF00072 Response regulator receiver domain TSH58p_12690 PF00990 Diguanylate cyclase, GGDEF domain TSH58p_12700 PF03453 MoeA N-terminal region (domain I and II) TSH58p_12700 PF03454 MoeA C-terminal region (domain IV) TSH58p_12700 PF00994 Probable molybdopterin binding domain TSH58p_12705 PF05726 Pirin C-terminal cupin domain TSH58p_12705 PF02678 Pirin TSH58p_12735 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) TSH58p_12740 PF02224 Cytidylate kinase TSH58p_12745 PF00575 S1 RNA binding domain TSH58p_12755 PF00216 Bacterial DNA-binding protein TSH58p_12765 PF02423 Ornithine cyclodeaminase/mu-crystallin family TSH58p_12770 PF01266 FAD dependent oxidoreductase TSH58p_12780 PF00215 Orotidine 5'-phosphate decarboxylase / HUMPS family TSH58p_12785 PF00697 N-(5'phosphoribosyl)anthranilate (PRA) isomerase TSH58p_12790 PF00072 Response regulator receiver domain TSH58p_12790 PF00990 Diguanylate cyclase, GGDEF domain TSH58p_12800 PF00528 Binding-protein-dependent transport system inner membrane component TSH58p_12805 PF02678 Pirin TSH58p_12805 PF05726 Pirin C-terminal cupin domain TSH58p_12820 PF11775 Cobalamin biosynthesis protein CobT VWA domain TSH58p_12820 PF06213 Cobalamin biosynthesis protein CobT TSH58p_12830 PF12556 Cobaltochelatase CobS subunit N terminal TSH58p_12830 PF08406 CbbQ/NirQ/NorQ C-terminal TSH58p_12830 PF07728 AAA domain (dynein-related subfamily) TSH58p_12835 PF00226 DnaJ domain TSH58p_12840 PF01722 BolA-like protein TSH58p_12855 PF00571 CBS domain TSH58p_12860 PF01761 3-dehydroquinate synthase TSH58p_12865 PF01202 Shikimate kinase TSH58p_12880 PF02899 Phage integrase, N-terminal SAM-like domain TSH58p_12880 PF00589 Phage integrase family TSH58p_12885 PF01274 Malate synthase TSH58p_12895 PF03255 Acetyl co-enzyme A carboxylase carboxyltransferase alpha subunit TSH58p_12910 PF01544 CorA-like Mg2+ transporter protein TSH58p_12920 PF00696 Amino acid kinase family TSH58p_12935 PF01926 50S ribosome-binding GTPase TSH58p_12940 PF02096 60Kd inner membrane protein TSH58p_12940 PF14849 YidC periplasmic domain TSH58p_12945 PF01809 Putative membrane protein insertion efficiency factor TSH58p_12950 PF00825 Ribonuclease P TSH58p_12955 PF00468 Ribosomal protein L34 TSH58p_12965 PF00535 Glycosyl transferase family 2 TSH58p_12995 PF00534 Glycosyl transferases group 1 TSH58p_12995 PF13439 Glycosyltransferase Family 4 TSH58p_13010 PF01370 NAD dependent epimerase/dehydratase family TSH58p_13015 PF01370 NAD dependent epimerase/dehydratase family TSH58p_13020 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain TSH58p_13020 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain TSH58p_13020 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain TSH58p_13030 PF13614 AAA domain TSH58p_13030 PF02706 Chain length determinant protein TSH58p_13030 PF13807 G-rich domain on putative tyrosine kinase TSH58p_13050 PF00892 EamA-like transporter family TSH58p_13055 PF02954 Bacterial regulatory protein, Fis family TSH58p_13055 PF00072 Response regulator receiver domain TSH58p_13060 PF00512 His Kinase A (phospho-acceptor) domain TSH58p_13060 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase TSH58p_13065 PF00005 ABC transporter TSH58p_13075 PF00132 Bacterial transferase hexapeptide (six repeats) TSH58p_13075 PF04613 UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase, LpxD TSH58p_13090 PF02654 Cobalamin-5-phosphate synthase TSH58p_13095 PF02277 Phosphoribosyltransferase TSH58p_13105 PF07687 Peptidase dimerisation domain TSH58p_13105 PF01546 Peptidase family M20/M25/M40 TSH58p_13110 PF14602 Hexapeptide repeat of succinyl-transferase TSH58p_13110 PF00132 Bacterial transferase hexapeptide (six repeats) TSH58p_13110 PF14805 Tetrahydrodipicolinate N-succinyltransferase N-terminal TSH58p_13120 PF00990 Diguanylate cyclase, GGDEF domain TSH58p_13120 PF03707 Bacterial signalling protein N terminal repeat TSH58p_13120 PF00563 EAL domain TSH58p_13145 PF00448 SRP54-type protein, GTPase domain TSH58p_13145 PF02978 Signal peptide binding domain TSH58p_13145 PF02881 SRP54-type protein, helical bundle domain TSH58p_13150 PF00886 Ribosomal protein S16 TSH58p_13155 PF01782 RimM N-terminal domain TSH58p_13155 PF05239 PRC-barrel domain TSH58p_13160 PF01746 tRNA (Guanine-1)-methyltransferase TSH58p_13165 PF01245 Ribosomal protein L19 TSH58p_13180 PF00330 Aconitase family (aconitate hydratase) TSH58p_13185 PF08279 HTH domain TSH58p_13185 PF13280 WYL domain TSH58p_13195 PF01878 EVE domain TSH58p_13200 PF02653 Branched-chain amino acid transport system / permease component TSH58p_13205 PF01416 tRNA pseudouridine synthase TSH58p_13210 PF00551 Formyl transferase TSH58p_13210 PF02911 Formyl transferase, C-terminal domain TSH58p_13215 PF01327 Polypeptide deformylase TSH58p_13225 PF00313 'Cold-shock' DNA-binding domain TSH58p_13230 PF02646 RmuC family TSH58p_13260 PF00155 Aminotransferase class I and II TSH58p_13270 PF00202 Aminotransferase class-III TSH58p_13275 PF02798 Glutathione S-transferase, N-terminal domain TSH58p_13275 PF14497 Glutathione S-transferase, C-terminal domain TSH58p_13285 PF08448 PAS fold TSH58p_13285 PF00563 EAL domain TSH58p_13285 PF08447 PAS fold TSH58p_13285 PF00990 Diguanylate cyclase, GGDEF domain TSH58p_13310 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family TSH58p_13310 PF03466 LysR substrate binding domain TSH58p_13320 PF07690 Major Facilitator Superfamily TSH58p_13325 PF00378 Enoyl-CoA hydratase/isomerase TSH58p_13330 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle TSH58p_13335 PF00528 Binding-protein-dependent transport system inner membrane component TSH58p_13340 PF00528 Binding-protein-dependent transport system inner membrane component TSH58p_13340 PF12911 N-terminal TM domain of oligopeptide transport permease C TSH58p_13350 PF00043 Glutathione S-transferase, C-terminal domain TSH58p_13350 PF02798 Glutathione S-transferase, N-terminal domain TSH58p_13355 PF04055 Radical SAM superfamily TSH58p_13390 PF07733 Bacterial DNA polymerase III alpha NTPase domain TSH58p_13390 PF01336 OB-fold nucleic acid binding domain TSH58p_13390 PF17657 Bacterial DNA polymerase III alpha subunit finger domain TSH58p_13390 PF02811 PHP domain TSH58p_13390 PF14579 Helix-hairpin-helix motif TSH58p_13410 PF16868 NMT1-like family TSH58p_13420 PF02789 Cytosol aminopeptidase family, N-terminal domain TSH58p_13420 PF00883 Cytosol aminopeptidase family, catalytic domain TSH58p_13425 PF14841 FliG middle domain TSH58p_13425 PF14842 FliG N-terminal domain TSH58p_13425 PF01706 FliG C-terminal domain TSH58p_13445 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain TSH58p_13455 PF08352 Oligopeptide/dipeptide transporter, C-terminal region TSH58p_13455 PF00005 ABC transporter TSH58p_13460 PF00528 Binding-protein-dependent transport system inner membrane component TSH58p_13460 PF12911 N-terminal TM domain of oligopeptide transport permease C TSH58p_13465 PF00528 Binding-protein-dependent transport system inner membrane component TSH58p_13470 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle TSH58p_13480 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle TSH58p_13485 PF00230 Major intrinsic protein TSH58p_13495 PF00459 Inositol monophosphatase family TSH58p_13500 PF09297 NADH pyrophosphatase zinc ribbon domain TSH58p_13500 PF00293 NUDIX domain TSH58p_13500 PF09296 NADH pyrophosphatase-like rudimentary NUDIX domain TSH58p_13515 PF01842 ACT domain TSH58p_13515 PF00800 Prephenate dehydratase TSH58p_13520 PF02348 Cytidylyltransferase TSH58p_13525 PF00034 Cytochrome c TSH58p_13535 PF12169 DNA polymerase III subunits gamma and tau domain III TSH58p_13535 PF12170 DNA polymerase III tau subunit V interacting with alpha TSH58p_13535 PF12168 DNA polymerase III subunits tau domain IV DnaB-binding TSH58p_13540 PF02575 YbaB/EbfC DNA-binding family TSH58p_13545 PF02132 RecR protein TSH58p_13545 PF13662 Toprim domain TSH58p_13550 PF00162 Phosphoglycerate kinase TSH58p_13555 PF01209 ubiE/COQ5 methyltransferase family TSH58p_13575 PF13649 Methyltransferase domain TSH58p_13585 PF00512 His Kinase A (phospho-acceptor) domain TSH58p_13585 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase TSH58p_13595 PF00294 pfkB family carbohydrate kinase TSH58p_13595 PF01467 Cytidylyltransferase-like TSH58p_13605 PF00561 alpha/beta hydrolase fold TSH58p_13615 PF07992 Pyridine nucleotide-disulphide oxidoreductase TSH58p_13615 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain TSH58p_13620 PF02899 Phage integrase, N-terminal SAM-like domain TSH58p_13620 PF00589 Phage integrase family TSH58p_13630 PF00923 Transaldolase/Fructose-6-phosphate aldolase TSH58p_13635 PF17764 3′ DNA-binding domain (3′BD) TSH58p_13635 PF18074 Primosomal protein N C-terminal domain TSH58p_13635 PF00270 DEAD/DEAH box helicase TSH58p_13635 PF18319 PriA DNA helicase Cys-rich region (CRR) domain TSH58p_13650 PF00213 ATP synthase delta (OSCP) subunit TSH58p_13655 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain TSH58p_13655 PF02874 ATP synthase alpha/beta family, beta-barrel domain TSH58p_13655 PF00306 ATP synthase alpha/beta chain, C terminal domain TSH58p_13660 PF00231 ATP synthase TSH58p_13665 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain TSH58p_13665 PF02874 ATP synthase alpha/beta family, beta-barrel domain TSH58p_13670 PF02823 ATP synthase, Delta/Epsilon chain, beta-sandwich domain TSH58p_13680 PF00293 NUDIX domain TSH58p_13690 PF13180 PDZ domain TSH58p_13690 PF03572 Peptidase family S41 TSH58p_13700 PF06415 BPG-independent PGAM N-terminus (iPGM_N) TSH58p_13700 PF01676 Metalloenzyme superfamily TSH58p_13705 PF02590 Predicted SPOUT methyltransferase TSH58p_13715 PF01467 Cytidylyltransferase-like TSH58p_13720 PF00171 Aldehyde dehydrogenase family TSH58p_13725 PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase TSH58p_13725 PF13442 Cytochrome C oxidase, cbb3-type, subunit III TSH58p_13725 PF00034 Cytochrome c TSH58p_13730 PF01925 Sulfite exporter TauE/SafE TSH58p_13735 PF13419 Haloacid dehalogenase-like hydrolase TSH58p_13740 PF00696 Amino acid kinase family TSH58p_13740 PF01472 PUA domain TSH58p_13745 PF01018 GTP1/OBG TSH58p_13745 PF01926 50S ribosome-binding GTPase TSH58p_13750 PF01016 Ribosomal L27 protein TSH58p_13755 PF00829 Ribosomal prokaryotic L21 protein TSH58p_13770 PF00005 ABC transporter TSH58p_13775 PF00005 ABC transporter TSH58p_13775 PF12399 Branched-chain amino acid ATP-binding cassette transporter TSH58p_13795 PF06508 Queuosine biosynthesis protein QueC TSH58p_13800 PF02653 Branched-chain amino acid transport system / permease component TSH58p_13815 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain TSH58p_13815 PF00672 HAMP domain TSH58p_13820 PF00535 Glycosyl transferase family 2 TSH58p_13830 PF00144 Beta-lactamase TSH58p_13845 PF00355 Rieske [2Fe-2S] domain TSH58p_13850 PF00795 Carbon-nitrogen hydrolase TSH58p_13850 PF02540 NAD synthase TSH58p_13860 PF00005 ABC transporter TSH58p_13900 PF00196 Bacterial regulatory proteins, luxR family TSH58p_13900 PF00072 Response regulator receiver domain TSH58p_13910 PF00005 ABC transporter TSH58p_13930 PF00034 Cytochrome c TSH58p_13945 PF02600 Disulfide bond formation protein DsbB TSH58p_13950 PF03232 Ubiquinone biosynthesis protein COQ7 TSH58p_13965 PF00749 tRNA synthetases class I (E and Q), catalytic domain TSH58p_13970 PF09308 LuxQ, periplasmic TSH58p_13970 PF00512 His Kinase A (phospho-acceptor) domain TSH58p_13970 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase TSH58p_13970 PF00072 Response regulator receiver domain TSH58p_13980 PF08769 Sporulation initiation factor Spo0A C terminal TSH58p_13980 PF00072 Response regulator receiver domain TSH58p_13985 PF08298 PrkA AAA domain TSH58p_13985 PF06798 PrkA serine protein kinase C-terminal domain TSH58p_13990 PF04285 Protein of unknown function (DUF444) TSH58p_13995 PF04293 SpoVR like protein TSH58p_14000 PF00672 HAMP domain TSH58p_14000 PF00211 Adenylate and Guanylate cyclase catalytic domain TSH58p_14010 PF04408 Helicase associated domain (HA2) TSH58p_14010 PF00271 Helicase conserved C-terminal domain TSH58p_14010 PF08482 ATP-dependent helicase C-terminal TSH58p_14010 PF00270 DEAD/DEAH box helicase TSH58p_14015 PF00005 ABC transporter TSH58p_14035 PF00486 Transcriptional regulatory protein, C terminal TSH58p_14035 PF00072 Response regulator receiver domain TSH58p_14060 PF01145 SPFH domain / Band 7 family TSH58p_14060 PF16200 C-terminal region of band_7 TSH58p_14065 PF01594 AI-2E family transporter TSH58p_14080 PF05145 Transition state regulatory protein AbrB TSH58p_14085 PF04952 Succinylglutamate desuccinylase / Aspartoacylase family TSH58p_14095 PF01513 ATP-NAD kinase TSH58p_14100 PF06463 Molybdenum Cofactor Synthesis C TSH58p_14100 PF04055 Radical SAM superfamily TSH58p_14115 PF00072 Response regulator receiver domain TSH58p_14115 PF17149 Periplasmic sensor domain found in signal transduction proteins TSH58p_14115 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase TSH58p_14115 PF00512 His Kinase A (phospho-acceptor) domain TSH58p_14115 PF01627 Hpt domain TSH58p_14115 PF00672 HAMP domain TSH58p_14125 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase TSH58p_14125 PF00512 His Kinase A (phospho-acceptor) domain TSH58p_14125 PF00989 PAS fold TSH58p_14135 PF00512 His Kinase A (phospho-acceptor) domain TSH58p_14135 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase TSH58p_14140 PF01515 Phosphate acetyl/butaryl transferase TSH58p_14145 PF00871 Acetokinase family TSH58p_14155 PF00571 CBS domain TSH58p_14155 PF00478 IMP dehydrogenase / GMP reductase domain TSH58p_14185 PF00072 Response regulator receiver domain TSH58p_14185 PF00196 Bacterial regulatory proteins, luxR family TSH58p_14190 PF00072 Response regulator receiver domain TSH58p_14190 PF00196 Bacterial regulatory proteins, luxR family TSH58p_14195 PF13361 UvrD-like helicase C-terminal domain TSH58p_14195 PF00580 UvrD/REP helicase N-terminal domain TSH58p_14220 PF01321 Creatinase/Prolidase N-terminal domain TSH58p_14220 PF01321 Creatinase/Prolidase N-terminal domain TSH58p_14220 PF00557 Metallopeptidase family M24 TSH58p_14220 PF00557 Metallopeptidase family M24 TSH58p_14225 PF00072 Response regulator receiver domain TSH58p_14240 PF13525 Outer membrane lipoprotein TSH58p_14245 PF02463 RecF/RecN/SMC N terminal domain TSH58p_14260 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain TSH58p_14270 PF00533 BRCA1 C Terminus (BRCT) domain TSH58p_14270 PF01653 NAD-dependent DNA ligase adenylation domain TSH58p_14270 PF03119 NAD-dependent DNA ligase C4 zinc finger domain TSH58p_14270 PF03120 NAD-dependent DNA ligase OB-fold domain TSH58p_14270 PF12826 Helix-hairpin-helix motif TSH58p_14280 PF03331 UDP-3-O-acyl N-acetylglycosamine deacetylase TSH58p_14285 PF00091 Tubulin/FtsZ family, GTPase domain TSH58p_14285 PF12327 FtsZ family, C-terminal domain TSH58p_14290 PF02491 SHS2 domain inserted in FTSA TSH58p_14295 PF08478 POTRA domain, FtsQ-type TSH58p_14295 PF03799 Cell division protein FtsQ TSH58p_14300 PF01820 D-ala D-ala ligase N-terminus TSH58p_14300 PF07478 D-ala D-ala ligase C-terminus TSH58p_14310 PF02873 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain TSH58p_14310 PF01565 FAD binding domain TSH58p_14315 PF02875 Mur ligase family, glutamate ligase domain TSH58p_14315 PF08245 Mur ligase middle domain TSH58p_14315 PF01225 Mur ligase family, catalytic domain TSH58p_14325 PF04101 Glycosyltransferase family 28 C-terminal domain TSH58p_14325 PF03033 Glycosyltransferase family 28 N-terminal domain TSH58p_14330 PF01098 Cell cycle protein TSH58p_14335 PF08245 Mur ligase middle domain TSH58p_14340 PF00953 Glycosyl transferase family 4 TSH58p_14340 PF10555 Phospho-N-acetylmuramoyl-pentapeptide-transferase signature 1 TSH58p_14345 PF02875 Mur ligase family, glutamate ligase domain TSH58p_14345 PF01225 Mur ligase family, catalytic domain TSH58p_14345 PF08245 Mur ligase middle domain TSH58p_14350 PF02875 Mur ligase family, glutamate ligase domain TSH58p_14350 PF01225 Mur ligase family, catalytic domain TSH58p_14350 PF08245 Mur ligase middle domain TSH58p_14355 PF00905 Penicillin binding protein transpeptidase domain TSH58p_14355 PF03717 Penicillin-binding Protein dimerisation domain TSH58p_14365 PF01795 MraW methylase family TSH58p_14370 PF02381 MraZ protein, putative antitoxin-like TSH58p_14380 PF01510 N-acetylmuramoyl-L-alanine amidase TSH58p_14385 PF00892 EamA-like transporter family TSH58p_14395 PF00226 DnaJ domain TSH58p_14395 PF05099 Tellurite resistance protein TerB TSH58p_14405 PF05378 Hydantoinase/oxoprolinase N-terminal region TSH58p_14405 PF01968 Hydantoinase/oxoprolinase TSH58p_14410 PF02913 FAD linked oxidases, C-terminal domain TSH58p_14410 PF01565 FAD binding domain TSH58p_14415 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase TSH58p_14415 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase TSH58p_14430 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase TSH58p_14430 PF00072 Response regulator receiver domain TSH58p_14430 PF13426 PAS domain TSH58p_14455 PF00348 Polyprenyl synthetase TSH58p_14465 PF05175 Methyltransferase small domain TSH58p_14470 PF01343 Peptidase family S49 TSH58p_14470 PF06965 Na+/H+ antiporter 1 TSH58p_14485 PF02091 Glycyl-tRNA synthetase alpha subunit TSH58p_14490 PF02092 Glycyl-tRNA synthetase beta subunit TSH58p_14490 PF05746 DALR anticodon binding domain TSH58p_14495 PF08502 LeuA allosteric (dimerisation) domain TSH58p_14495 PF00682 HMGL-like TSH58p_14500 PF04172 LrgB-like family TSH58p_14505 PF03788 LrgA family TSH58p_14510 PF12146 Serine aminopeptidase, S33 TSH58p_14525 PF08240 Alcohol dehydrogenase GroES-like domain TSH58p_14525 PF13823 Alcohol dehydrogenase GroES-associated TSH58p_14525 PF00107 Zinc-binding dehydrogenase TSH58p_14540 PF11941 Domain of unknown function (DUF3459) TSH58p_14540 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) TSH58p_14540 PF00128 Alpha amylase, catalytic domain TSH58p_14550 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase TSH58p_14550 PF00512 His Kinase A (phospho-acceptor) domain TSH58p_14580 PF01471 Putative peptidoglycan binding domain TSH58p_14580 PF01520 N-acetylmuramoyl-L-alanine amidase TSH58p_14585 PF05951 Bacterial protein of unknown function (DUF882) TSH58p_14600 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain TSH58p_14600 PF00672 HAMP domain TSH58p_14615 PF01545 Cation efflux family TSH58p_14635 PF01220 Dehydroquinase class II TSH58p_14640 PF00364 Biotin-requiring enzyme TSH58p_14645 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain TSH58p_14645 PF02785 Biotin carboxylase C-terminal domain TSH58p_14645 PF00289 Biotin carboxylase, N-terminal domain TSH58p_14650 PF00445 Ribonuclease T2 family TSH58p_14655 PF03588 Leucyl/phenylalanyl-tRNA protein transferase TSH58p_14680 PF01810 LysE type translocator TSH58p_14690 PF02606 Tetraacyldisaccharide-1-P 4'-kinase TSH58p_14695 PF04413 3-Deoxy-D-manno-octulosonic-acid transferase (kdotransferase) TSH58p_14705 PF00534 Glycosyl transferases group 1 TSH58p_14705 PF13439 Glycosyltransferase Family 4 TSH58p_14715 PF00781 Diacylglycerol kinase catalytic domain TSH58p_14730 PF01523 Putative modulator of DNA gyrase TSH58p_14745 PF01977 3-octaprenyl-4-hydroxybenzoate carboxy-lyase TSH58p_14765 PF01040 UbiA prenyltransferase family TSH58p_14770 PF04452 RNA methyltransferase TSH58p_14775 PF04107 Glutamate-cysteine ligase family 2(GCS2) TSH58p_14805 PF01272 Transcription elongation factor, GreA/GreB, C-term TSH58p_14805 PF03449 Transcription elongation factor, N-terminal TSH58p_14810 PF12111 Polyribonucleotide phosphorylase C terminal TSH58p_14810 PF00575 S1 RNA binding domain TSH58p_14810 PF10150 Ribonuclease E/G family TSH58p_14820 PF00912 Transglycosylase TSH58p_14820 PF00905 Penicillin binding protein transpeptidase domain TSH58p_14820 PF17092 Penicillin-binding protein OB-like domain TSH58p_14830 PF03062 MBOAT, membrane-bound O-acyltransferase family TSH58p_14855 PF00005 ABC transporter TSH58p_14860 PF16177 Acetyl-coenzyme A synthetase N-terminus TSH58p_14860 PF00501 AMP-binding enzyme TSH58p_14860 PF13193 AMP-binding enzyme C-terminal domain TSH58p_14880 PF03781 Sulfatase-modifying factor enzyme 1 TSH58p_14895 PF17926 Tetracyclin repressor-like, C-terminal domain TSH58p_14895 PF00440 Bacterial regulatory proteins, tetR family TSH58p_14900 PF00528 Binding-protein-dependent transport system inner membrane component TSH58p_14910 PF00005 ABC transporter TSH58p_14920 PF01408 Oxidoreductase family, NAD-binding Rossmann fold TSH58p_14920 PF02894 Oxidoreductase family, C-terminal alpha/beta domain TSH58p_14940 PF02653 Branched-chain amino acid transport system / permease component TSH58p_14950 PF12399 Branched-chain amino acid ATP-binding cassette transporter TSH58p_14950 PF00005 ABC transporter TSH58p_14955 PF00005 ABC transporter TSH58p_14960 PF07687 Peptidase dimerisation domain TSH58p_14960 PF01546 Peptidase family M20/M25/M40 TSH58p_14965 PF00672 HAMP domain TSH58p_14965 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain TSH58p_14975 PF00480 ROK family TSH58p_14985 PF01979 Amidohydrolase family TSH58p_14990 PF02358 Trehalose-phosphatase TSH58p_15000 PF00005 ABC transporter TSH58p_15005 PF12399 Branched-chain amino acid ATP-binding cassette transporter TSH58p_15005 PF00005 ABC transporter TSH58p_15015 PF13458 Periplasmic binding protein TSH58p_15070 PF08032 RNA 2'-O ribose methyltransferase substrate binding TSH58p_15070 PF00588 SpoU rRNA Methylase family TSH58p_15085 PF00009 Elongation factor Tu GTP binding domain TSH58p_15085 PF03143 Elongation factor Tu C-terminal domain TSH58p_15085 PF03144 Elongation factor Tu domain 2 TSH58p_15100 PF00467 KOW motif TSH58p_15100 PF02357 Transcription termination factor nusG TSH58p_15105 PF00298 Ribosomal protein L11, RNA binding domain TSH58p_15105 PF03946 Ribosomal protein L11, N-terminal domain TSH58p_15110 PF00687 Ribosomal protein L1p/L10e family TSH58p_15115 PF00466 Ribosomal protein L10 TSH58p_15120 PF00542 Ribosomal protein L7/L12 C-terminal domain TSH58p_15120 PF16320 Ribosomal protein L7/L12 dimerisation domain TSH58p_15125 PF10385 RNA polymerase beta subunit external 1 domain TSH58p_15125 PF04565 RNA polymerase Rpb2, domain 3 TSH58p_15125 PF04561 RNA polymerase Rpb2, domain 2 TSH58p_15125 PF04563 RNA polymerase beta subunit TSH58p_15125 PF04560 RNA polymerase Rpb2, domain 7 TSH58p_15125 PF00562 RNA polymerase Rpb2, domain 6 TSH58p_15130 PF04983 RNA polymerase Rpb1, domain 3 TSH58p_15130 PF05000 RNA polymerase Rpb1, domain 4 TSH58p_15130 PF00623 RNA polymerase Rpb1, domain 2 TSH58p_15130 PF04998 RNA polymerase Rpb1, domain 5 TSH58p_15130 PF04997 RNA polymerase Rpb1, domain 1 TSH58p_15135 PF01965 DJ-1/PfpI family TSH58p_15140 PF00164 Ribosomal protein S12/S23 TSH58p_15145 PF00177 Ribosomal protein S7p/S5e TSH58p_15150 PF03144 Elongation factor Tu domain 2 TSH58p_15150 PF00009 Elongation factor Tu GTP binding domain TSH58p_15150 PF00679 Elongation factor G C-terminus TSH58p_15150 PF14492 Elongation Factor G, domain II TSH58p_15150 PF03764 Elongation factor G, domain IV TSH58p_15155 PF00009 Elongation factor Tu GTP binding domain TSH58p_15155 PF03144 Elongation factor Tu domain 2 TSH58p_15155 PF03143 Elongation factor Tu C-terminal domain TSH58p_15160 PF00338 Ribosomal protein S10p/S20e TSH58p_15165 PF00297 Ribosomal protein L3 TSH58p_15170 PF00573 Ribosomal protein L4/L1 family TSH58p_15175 PF00276 Ribosomal protein L23 TSH58p_15180 PF00181 Ribosomal Proteins L2, RNA binding domain TSH58p_15180 PF03947 Ribosomal Proteins L2, C-terminal domain TSH58p_15185 PF00203 Ribosomal protein S19 TSH58p_15190 PF00237 Ribosomal protein L22p/L17e TSH58p_15195 PF07650 KH domain TSH58p_15195 PF00189 Ribosomal protein S3, C-terminal domain TSH58p_15200 PF00252 Ribosomal protein L16p/L10e TSH58p_15205 PF00831 Ribosomal L29 protein TSH58p_15210 PF00366 Ribosomal protein S17 TSH58p_15215 PF00238 Ribosomal protein L14p/L23e TSH58p_15220 PF17136 Ribosomal proteins 50S L24/mitochondrial 39S L24 TSH58p_15220 PF00467 KOW motif TSH58p_15225 PF00673 ribosomal L5P family C-terminus TSH58p_15225 PF00281 Ribosomal protein L5 TSH58p_15230 PF00253 Ribosomal protein S14p/S29e TSH58p_15235 PF00410 Ribosomal protein S8 TSH58p_15240 PF00347 Ribosomal protein L6 TSH58p_15245 PF00861 Ribosomal L18 of archaea, bacteria, mitoch. and chloroplast TSH58p_15250 PF03719 Ribosomal protein S5, C-terminal domain TSH58p_15250 PF00333 Ribosomal protein S5, N-terminal domain TSH58p_15255 PF00327 Ribosomal protein L30p/L7e TSH58p_15260 PF00828 Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27A TSH58p_15265 PF00344 SecY translocase TSH58p_15270 PF05191 Adenylate kinase, active site lid TSH58p_15275 PF00392 Bacterial regulatory proteins, gntR family TSH58p_15275 PF07729 FCD domain TSH58p_15290 PF04107 Glutamate-cysteine ligase family 2(GCS2) TSH58p_15295 PF01053 Cys/Met metabolism PLP-dependent enzyme TSH58p_15300 PF00561 alpha/beta hydrolase fold TSH58p_15300 PF00364 Biotin-requiring enzyme TSH58p_15305 PF00512 His Kinase A (phospho-acceptor) domain TSH58p_15305 PF13426 PAS domain TSH58p_15305 PF00989 PAS fold TSH58p_15305 PF13188 PAS domain TSH58p_15305 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase TSH58p_15310 PF00011 Hsp20/alpha crystallin family TSH58p_15320 PF01197 Ribosomal protein L31 TSH58p_15325 PF00664 ABC transporter transmembrane region TSH58p_15325 PF00005 ABC transporter TSH58p_15335 PF13847 Methyltransferase domain TSH58p_15335 PF10119 Predicted methyltransferase regulatory domain TSH58p_15350 PF07977 FabA-like domain TSH58p_15360 PF03963 Flagellar hook capping protein - N-terminal region TSH58p_15375 PF10135 Rod binding protein TSH58p_15375 PF01832 Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase TSH58p_15380 PF02119 Flagellar P-ring protein TSH58p_15385 PF10768 Class II flagellar assembly regulator TSH58p_15390 PF01258 Prokaryotic dksA/traR C4-type zinc finger TSH58p_15395 PF02107 Flagellar L-ring protein TSH58p_15405 PF00460 Flagella basal body rod protein TSH58p_15405 PF06429 Flagellar basal body rod FlgEFG protein C-terminal TSH58p_15410 PF00460 Flagella basal body rod protein TSH58p_15410 PF06429 Flagellar basal body rod FlgEFG protein C-terminal TSH58p_15415 PF03748 Flagellar basal body-associated protein FliL TSH58p_15420 PF02154 Flagellar motor switch protein FliM TSH58p_15420 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term TSH58p_15450 PF13677 Membrane MotB of proton-channel complex MotA/MotB TSH58p_15450 PF00691 OmpA family TSH58p_15460 PF02705 K+ potassium transporter TSH58p_15465 PF00813 FliP family TSH58p_15480 PF01312 FlhB HrpN YscU SpaS Family TSH58p_15485 PF00460 Flagella basal body rod protein TSH58p_15490 PF06429 Flagellar basal body rod FlgEFG protein C-terminal TSH58p_15495 PF02049 Flagellar hook-basal body complex protein FliE TSH58p_15500 PF01313 Bacterial export proteins, family 3 TSH58p_15505 PF01311 Bacterial export proteins, family 1 TSH58p_15510 PF01312 FlhB HrpN YscU SpaS Family TSH58p_15515 PF00512 His Kinase A (phospho-acceptor) domain TSH58p_15515 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase TSH58p_15515 PF00072 Response regulator receiver domain TSH58p_15515 PF13188 PAS domain TSH58p_15515 PF08448 PAS fold TSH58p_15525 PF00154 recA bacterial DNA recombination protein TSH58p_15530 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain TSH58p_15530 PF02272 DHHA1 domain TSH58p_15530 PF01411 tRNA synthetases class II (A) TSH58p_15545 PF13291 ACT domain TSH58p_15545 PF00291 Pyridoxal-phosphate dependent enzyme TSH58p_15560 PF12801 4Fe-4S binding domain TSH58p_15560 PF13746 4Fe-4S dicluster domain TSH58p_15560 PF11614 IG-like fold at C-terminal of FixG, putative oxidoreductase TSH58p_15565 PF13291 ACT domain TSH58p_15565 PF04607 Region found in RelA / SpoT proteins TSH58p_15565 PF02824 TGS domain TSH58p_15585 PF03992 Antibiotic biosynthesis monooxygenase TSH58p_15595 PF18324 Hypothetical protein TT1725 TSH58p_15595 PF00180 Isocitrate/isopropylmalate dehydrogenase TSH58p_15600 PF04542 Sigma-70 region 2 TSH58p_15600 PF08281 Sigma-70, region 4 TSH58p_15615 PF06055 Exopolysaccharide synthesis, ExoD TSH58p_15625 PF00180 Isocitrate/isopropylmalate dehydrogenase TSH58p_15630 PF03641 Possible lysine decarboxylase TSH58p_15650 PF02666 Phosphatidylserine decarboxylase TSH58p_15655 PF01066 CDP-alcohol phosphatidyltransferase TSH58p_15665 PF00583 Acetyltransferase (GNAT) family TSH58p_15670 PF05175 Methyltransferase small domain TSH58p_15675 PF03960 ArsC family TSH58p_15680 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain TSH58p_15680 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain TSH58p_15695 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase TSH58p_15695 PF00512 His Kinase A (phospho-acceptor) domain TSH58p_15695 PF00072 Response regulator receiver domain TSH58p_15695 PF08448 PAS fold TSH58p_15695 PF13188 PAS domain TSH58p_15700 PF00988 Carbamoyl-phosphate synthase small chain, CPSase domain TSH58p_15700 PF00117 Glutamine amidotransferase class-I TSH58p_15710 PF08275 DNA primase catalytic core, N-terminal domain TSH58p_15710 PF01807 CHC2 zinc finger TSH58p_15710 PF08278 DNA primase DnaG DnaB-binding TSH58p_15710 PF10410 DnaB-helicase binding domain of primase TSH58p_15710 PF13662 Toprim domain TSH58p_15715 PF04545 Sigma-70, region 4 TSH58p_15715 PF04539 Sigma-70 region 3 TSH58p_15715 PF04542 Sigma-70 region 2 TSH58p_15715 PF00140 Sigma-70 factor, region 1.2 TSH58p_15715 PF03979 Sigma-70 factor, region 1.1 TSH58p_15715 PF04546 Sigma-70, non-essential region TSH58p_15725 PF18071 HMW1C N-terminal TSH58p_15725 PF18254 HMW1 domain 2 TSH58p_15745 PF04434 SWIM zinc finger TSH58p_15745 PF00176 SNF2 family N-terminal domain TSH58p_15745 PF00271 Helicase conserved C-terminal domain TSH58p_15755 PF10576 Iron-sulfur binding domain of endonuclease III TSH58p_15755 PF00730 HhH-GPD superfamily base excision DNA repair protein TSH58p_15755 PF00633 Helix-hairpin-helix motif TSH58p_15765 PF00535 Glycosyl transferase family 2 TSH58p_15765 PF03170 Bacterial cellulose synthase subunit TSH58p_15765 PF07238 PilZ domain TSH58p_15795 PF01042 Endoribonuclease L-PSP TSH58p_15800 PF03764 Elongation factor G, domain IV TSH58p_15800 PF00679 Elongation factor G C-terminus TSH58p_15800 PF03144 Elongation factor Tu domain 2 TSH58p_15800 PF00009 Elongation factor Tu GTP binding domain TSH58p_15800 PF14492 Elongation Factor G, domain II TSH58p_15810 PF13180 PDZ domain TSH58p_15815 PF00072 Response regulator receiver domain TSH58p_15815 PF00486 Transcriptional regulatory protein, C terminal TSH58p_15820 PF00512 His Kinase A (phospho-acceptor) domain TSH58p_15820 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase TSH58p_15820 PF00672 HAMP domain TSH58p_15825 PF01594 AI-2E family transporter TSH58p_15830 PF07690 Major Facilitator Superfamily TSH58p_15835 PF02687 FtsX-like permease family TSH58p_15835 PF12704 MacB-like periplasmic core domain TSH58p_15835 PF00005 ABC transporter TSH58p_15840 PF03649 Uncharacterised protein family (UPF0014) TSH58p_15850 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase TSH58p_15850 PF00512 His Kinase A (phospho-acceptor) domain TSH58p_15850 PF01627 Hpt domain TSH58p_15850 PF18415 Histidine kinase receptor ArcB trans-membrane domain TSH58p_15850 PF00072 Response regulator receiver domain TSH58p_15850 PF00989 PAS fold TSH58p_15855 PF03705 CheR methyltransferase, all-alpha domain TSH58p_15855 PF08448 PAS fold TSH58p_15855 PF01339 CheB methylesterase TSH58p_15855 PF01739 CheR methyltransferase, SAM binding domain TSH58p_15865 PF01343 Peptidase family S49 TSH58p_15875 PF00486 Transcriptional regulatory protein, C terminal TSH58p_15875 PF00072 Response regulator receiver domain TSH58p_15885 PF01264 Chorismate synthase TSH58p_15900 PF03631 Virulence factor BrkB TSH58p_15905 PF04055 Radical SAM superfamily TSH58p_15905 PF06463 Molybdenum Cofactor Synthesis C TSH58p_15920 PF02386 Cation transport protein TSH58p_15930 PF13393 Histidyl-tRNA synthetase TSH58p_15935 PF00709 Adenylosuccinate synthetase TSH58p_15940 PF00069 Protein kinase domain TSH58p_15950 PF04542 Sigma-70 region 2 TSH58p_15950 PF00140 Sigma-70 factor, region 1.2 TSH58p_15950 PF04545 Sigma-70, region 4 TSH58p_15955 PF00849 RNA pseudouridylate synthase TSH58p_15965 PF01212 Beta-eliminating lyase TSH58p_15980 PF17843 MycE methyltransferase N-terminal TSH58p_15985 PF01464 Transglycosylase SLT domain TSH58p_15990 PF04542 Sigma-70 region 2 TSH58p_15990 PF08281 Sigma-70, region 4 TSH58p_15995 PF07043 Protein of unknown function (DUF1328) TSH58p_16005 PF06082 Exopolysaccharide biosynthesis protein YbjH TSH58p_16015 PF01523 Putative modulator of DNA gyrase TSH58p_16025 PF00116 Cytochrome C oxidase subunit II, periplasmic domain TSH58p_16025 PF02790 Cytochrome C oxidase subunit II, transmembrane domain TSH58p_16030 PF00115 Cytochrome C and Quinol oxidase polypeptide I TSH58p_16035 PF01040 UbiA prenyltransferase family TSH58p_16045 PF04442 Cytochrome c oxidase assembly protein CtaG/Cox11 TSH58p_16050 PF00510 Cytochrome c oxidase subunit III TSH58p_16060 PF02104 SURF1 family TSH58p_16065 PF02074 Carboxypeptidase Taq (M32) metallopeptidase TSH58p_16070 PF00150 Cellulase (glycosyl hydrolase family 5) TSH58p_16075 PF00291 Pyridoxal-phosphate dependent enzyme TSH58p_16075 PF14821 Threonine synthase N terminus TSH58p_16080 PF05193 Peptidase M16 inactive domain TSH58p_16080 PF00675 Insulinase (Peptidase family M16) TSH58p_16085 PF13302 Acetyltransferase (GNAT) domain TSH58p_16095 PF02622 Uncharacterized ACR, COG1678 TSH58p_16105 PF08534 Redoxin TSH58p_16110 PF13193 AMP-binding enzyme C-terminal domain TSH58p_16110 PF00501 AMP-binding enzyme TSH58p_16115 PF00075 RNase H TSH58p_16120 PF01636 Phosphotransferase enzyme family TSH58p_16130 PF02401 LytB protein TSH58p_16150 PF01571 Aminomethyltransferase folate-binding domain TSH58p_16150 PF08669 Glycine cleavage T-protein C-terminal barrel domain TSH58p_16155 PF01597 Glycine cleavage H-protein TSH58p_16160 PF02347 Glycine cleavage system P-protein TSH58p_16165 PF00266 Aminotransferase class-V TSH58p_16170 PF13677 Membrane MotB of proton-channel complex MotA/MotB TSH58p_16170 PF00691 OmpA family TSH58p_16185 PF00459 Inositol monophosphatase family TSH58p_16190 PF01132 Elongation factor P (EF-P) OB domain TSH58p_16190 PF08207 Elongation factor P (EF-P) KOW-like domain TSH58p_16190 PF09285 Elongation factor P, C-terminal TSH58p_16195 PF00152 tRNA synthetases class II (D, K and N) TSH58p_16200 PF08240 Alcohol dehydrogenase GroES-like domain TSH58p_16200 PF00107 Zinc-binding dehydrogenase TSH58p_16205 PF03349 Outer membrane protein transport protein (OMPP1/FadL/TodX) TSH58p_16210 PF01925 Sulfite exporter TauE/SafE TSH58p_16215 PF02581 Thiamine monophosphate synthase TSH58p_16220 PF01791 DeoC/LacD family aldolase TSH58p_16240 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain TSH58p_16240 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain TSH58p_16245 PF00456 Transketolase, thiamine diphosphate binding domain TSH58p_16245 PF02779 Transketolase, pyrimidine binding domain TSH58p_16245 PF02780 Transketolase, C-terminal domain TSH58p_16265 PF01812 5-formyltetrahydrofolate cyclo-ligase family TSH58p_16270 PF13277 YmdB-like protein TSH58p_16275 PF01709 Transcriptional regulator TSH58p_16280 PF02075 Crossover junction endodeoxyribonuclease RuvC TSH58p_16285 PF07499 RuvA, C-terminal domain TSH58p_16285 PF01330 RuvA N terminal domain TSH58p_16290 PF05491 RuvB C-terminal winged helix domain TSH58p_16290 PF05496 Holliday junction DNA helicase RuvB P-loop domain TSH58p_16290 PF17864 RuvB AAA lid domain TSH58p_16295 PF03061 Thioesterase superfamily TSH58p_16300 PF01618 MotA/TolQ/ExbB proton channel family TSH58p_16305 PF02472 Biopolymer transport protein ExbD/TolR TSH58p_16315 PF04052 TolB amino-terminal domain TSH58p_16315 PF07676 WD40-like Beta Propeller Repeat TSH58p_16320 PF00691 OmpA family TSH58p_16335 PF02719 Polysaccharide biosynthesis protein TSH58p_16340 PF01370 NAD dependent epimerase/dehydratase family TSH58p_16345 PF10555 Phospho-N-acetylmuramoyl-pentapeptide-transferase signature 1 TSH58p_16345 PF00953 Glycosyl transferase family 4 TSH58p_16350 PF00534 Glycosyl transferases group 1 TSH58p_16350 PF13477 Glycosyl transferase 4-like TSH58p_16355 PF01370 NAD dependent epimerase/dehydratase family TSH58p_16365 PF13537 Glutamine amidotransferase domain TSH58p_16365 PF00733 Asparagine synthase TSH58p_16370 PF00892 EamA-like transporter family TSH58p_16380 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) TSH58p_16390 PF02566 OsmC-like protein TSH58p_16400 PF00893 Small Multidrug Resistance protein TSH58p_16425 PF11849 Domain of unknown function (DUF3369) TSH58p_16435 PF09345 Domain of unknown function (DUF1987) TSH58p_16440 PF00512 His Kinase A (phospho-acceptor) domain TSH58p_16440 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase TSH58p_16440 PF00497 Bacterial extracellular solute-binding proteins, family 3 TSH58p_16445 PF00072 Response regulator receiver domain TSH58p_16445 PF00486 Transcriptional regulatory protein, C terminal TSH58p_16460 PF00004 ATPase family associated with various cellular activities (AAA) TSH58p_16460 PF06480 FtsH Extracellular TSH58p_16460 PF01434 Peptidase family M41 TSH58p_16460 PF17862 AAA+ lid domain TSH58p_16465 PF01556 DnaJ C terminal domain TSH58p_16465 PF00226 DnaJ domain TSH58p_16470 PF05433 Glycine zipper 2TM domain TSH58p_16470 PF16998 17 kDa outer membrane surface antigen TSH58p_16475 PF01243 Pyridoxamine 5'-phosphate oxidase TSH58p_16475 PF10590 Pyridoxine 5'-phosphate oxidase C-terminal dimerisation region TSH58p_16480 PF16916 Dimerisation domain of Zinc Transporter TSH58p_16480 PF01545 Cation efflux family TSH58p_16485 PF00672 HAMP domain TSH58p_16485 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain TSH58p_16490 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain TSH58p_16490 PF16591 Helical bimodular sensor domain TSH58p_16490 PF00672 HAMP domain TSH58p_16500 PF12706 Beta-lactamase superfamily domain TSH58p_16505 PF03600 Citrate transporter TSH58p_16520 PF07683 Cobalamin synthesis protein cobW C-terminal domain TSH58p_16520 PF02492 CobW/HypB/UreG, nucleotide-binding domain TSH58p_16525 PF01475 Ferric uptake regulator family TSH58p_16535 PF00875 DNA photolyase TSH58p_16535 PF03441 FAD binding domain of DNA photolyase TSH58p_16540 PF02469 Fasciclin domain TSH58p_16550 PF00270 DEAD/DEAH box helicase TSH58p_16550 PF00271 Helicase conserved C-terminal domain TSH58p_16550 PF08494 DEAD/H associated TSH58p_16555 PF01209 ubiE/COQ5 methyltransferase family TSH58p_16570 PF00561 alpha/beta hydrolase fold TSH58p_16575 PF12802 MarR family TSH58p_16585 PF00027 Cyclic nucleotide-binding domain TSH58p_16585 PF13545 Crp-like helix-turn-helix domain TSH58p_16605 PF01389 OmpA-like transmembrane domain TSH58p_16605 PF00691 OmpA family TSH58p_16625 PF00211 Adenylate and Guanylate cyclase catalytic domain TSH58p_16630 PF03781 Sulfatase-modifying factor enzyme 1 TSH58p_16635 PF00325 Bacterial regulatory proteins, crp family TSH58p_16635 PF00027 Cyclic nucleotide-binding domain TSH58p_16640 PF00501 AMP-binding enzyme TSH58p_16640 PF13193 AMP-binding enzyme C-terminal domain TSH58p_16650 PF00441 Acyl-CoA dehydrogenase, C-terminal domain TSH58p_16650 PF02770 Acyl-CoA dehydrogenase, middle domain TSH58p_16650 PF02771 Acyl-CoA dehydrogenase, N-terminal domain TSH58p_16665 PF04305 Protein of unknown function (DUF455) TSH58p_16670 PF00459 Inositol monophosphatase family TSH58p_16690 PF16657 Maltogenic Amylase, C-terminal domain TSH58p_16690 PF00128 Alpha amylase, catalytic domain TSH58p_16695 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) TSH58p_16695 PF02806 Alpha amylase, C-terminal all-beta domain TSH58p_16695 PF00128 Alpha amylase, catalytic domain TSH58p_16700 PF00128 Alpha amylase, catalytic domain TSH58p_16700 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) TSH58p_16705 PF00072 Response regulator receiver domain TSH58p_16705 PF00486 Transcriptional regulatory protein, C terminal TSH58p_16710 PF02446 4-alpha-glucanotransferase TSH58p_16715 PF00210 Ferritin-like domain TSH58p_16735 PF00929 Exonuclease TSH58p_16740 PF02639 Uncharacterized BCR, YaiI/YqxD family COG1671 TSH58p_16745 PF12848 ABC transporter TSH58p_16745 PF00005 ABC transporter TSH58p_16760 PF04333 MlaA lipoprotein TSH58p_16765 PF03551 Transcriptional regulator PadR-like family TSH58p_16765 PF13847 Methyltransferase domain TSH58p_16770 PF02219 Methylenetetrahydrofolate reductase TSH58p_16780 PF00809 Pterin binding enzyme TSH58p_16780 PF02965 Vitamin B12 dependent methionine synthase, activation domain TSH58p_16780 PF02607 B12 binding domain TSH58p_16780 PF02574 Homocysteine S-methyltransferase TSH58p_16780 PF02310 B12 binding domain TSH58p_16795 PF00990 Diguanylate cyclase, GGDEF domain TSH58p_16800 PF03060 Nitronate monooxygenase TSH58p_16805 PF04879 Molybdopterin oxidoreductase Fe4S4 domain TSH58p_16805 PF00384 Molybdopterin oxidoreductase TSH58p_16805 PF01568 Molydopterin dinucleotide binding domain TSH58p_16815 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain TSH58p_16815 PF00672 HAMP domain TSH58p_16815 PF00672 HAMP domain TSH58p_16815 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain TSH58p_16820 PF03831 PhnA domain TSH58p_16820 PF08274 PhnA Zinc-Ribbon TSH58p_16825 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component TSH58p_16830 PF04290 Tripartite ATP-independent periplasmic transporters, DctQ component TSH58p_16835 PF03480 Bacterial extracellular solute-binding protein, family 7 TSH58p_16840 PF00989 PAS fold TSH58p_16840 PF00512 His Kinase A (phospho-acceptor) domain TSH58p_16840 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase TSH58p_16845 PF00196 Bacterial regulatory proteins, luxR family TSH58p_16845 PF00072 Response regulator receiver domain TSH58p_16850 PF00512 His Kinase A (phospho-acceptor) domain TSH58p_16850 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase TSH58p_16870 PF18125 RlmM ferredoxin-like domain TSH58p_16870 PF01728 FtsJ-like methyltransferase TSH58p_16875 PF01734 Patatin-like phospholipase TSH58p_16890 PF00301 Rubredoxin TSH58p_16900 PF05951 Bacterial protein of unknown function (DUF882) TSH58p_16905 PF01380 SIS domain TSH58p_16910 PF12804 MobA-like NTP transferase domain TSH58p_16910 PF00132 Bacterial transferase hexapeptide (six repeats) TSH58p_16910 PF14602 Hexapeptide repeat of succinyl-transferase TSH58p_16915 PF13419 Haloacid dehalogenase-like hydrolase TSH58p_16945 PF02569 Pantoate-beta-alanine ligase TSH58p_16950 PF00171 Aldehyde dehydrogenase family TSH58p_16960 PF01474 Class-II DAHP synthetase family TSH58p_16965 PF07690 Major Facilitator Superfamily TSH58p_16970 PF05067 Manganese containing catalase TSH58p_16975 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain TSH58p_16975 PF07992 Pyridine nucleotide-disulphide oxidoreductase TSH58p_16995 PF12867 DinB superfamily TSH58p_16995 PF03781 Sulfatase-modifying factor enzyme 1 TSH58p_17005 PF00378 Enoyl-CoA hydratase/isomerase TSH58p_17015 PF03461 TRCF domain TSH58p_17015 PF00270 DEAD/DEAH box helicase TSH58p_17015 PF17757 UvrB interaction domain TSH58p_17015 PF02559 CarD-like/TRCF domain TSH58p_17015 PF00271 Helicase conserved C-terminal domain TSH58p_17035 PF00472 RF-1 domain TSH58p_17065 PF02283 Cobinamide kinase / cobinamide phosphate guanyltransferase TSH58p_17070 PF02572 ATP:corrinoid adenosyltransferase BtuR/CobO/CobP TSH58p_17070 PF12557 Cob(I)alamin adenosyltransferase N terminal TSH58p_17075 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain TSH58p_17075 PF07685 CobB/CobQ-like glutamine amidotransferase domain TSH58p_17080 PF17191 RecG wedge domain TSH58p_17080 PF00270 DEAD/DEAH box helicase TSH58p_17080 PF00271 Helicase conserved C-terminal domain TSH58p_17095 PF02797 Chalcone and stilbene synthases, C-terminal domain TSH58p_17095 PF00195 Chalcone and stilbene synthases, N-terminal domain TSH58p_17100 PF04140 Isoprenylcysteine carboxyl methyltransferase (ICMT) family TSH58p_17110 PF13545 Crp-like helix-turn-helix domain TSH58p_17110 PF00027 Cyclic nucleotide-binding domain TSH58p_17120 PF00325 Bacterial regulatory proteins, crp family TSH58p_17120 PF00027 Cyclic nucleotide-binding domain TSH58p_17170 PF01048 Phosphorylase superfamily TSH58p_17180 PF04227 Indigoidine synthase A like protein TSH58p_17190 PF04675 DNA ligase N terminus TSH58p_17190 PF01068 ATP dependent DNA ligase domain TSH58p_17190 PF04679 ATP dependent DNA ligase C terminal region TSH58p_17200 PF13673 Acetyltransferase (GNAT) domain TSH58p_17220 PF05974 Domain of unknown function (DUF892) TSH58p_17235 PF05443 ROS/MUCR transcriptional regulator protein TSH58p_17240 PF02502 Ribose/Galactose Isomerase TSH58p_17245 PF00464 Serine hydroxymethyltransferase TSH58p_17250 PF03477 ATP cone domain TSH58p_17255 PF01872 RibD C-terminal domain TSH58p_17255 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region TSH58p_17260 PF00677 Lumazine binding domain TSH58p_17265 PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase TSH58p_17265 PF00925 GTP cyclohydrolase II TSH58p_17270 PF00885 6,7-dimethyl-8-ribityllumazine synthase TSH58p_17275 PF01029 NusB family TSH58p_17280 PF02769 AIR synthase related protein, C-terminal domain TSH58p_17280 PF00586 AIR synthase related protein, N-terminal domain TSH58p_17290 PF03030 Inorganic H+ pyrophosphatase TSH58p_17310 PF01783 Ribosomal L32p protein family TSH58p_17315 PF02504 Fatty acid synthesis protein TSH58p_17320 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal TSH58p_17320 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III TSH58p_17325 PF00216 Bacterial DNA-binding protein TSH58p_17330 PF13411 MerR HTH family regulatory protein TSH58p_17405 PF03837 RecT family TSH58p_17460 PF01381 Helix-turn-helix TSH58p_17690 PF00589 Phage integrase family TSH58p_17690 PF02899 Phage integrase, N-terminal SAM-like domain TSH58p_17820 PF18674 TarS beta-glycosyltransferase C-terminal domain 1 TSH58p_17820 PF00535 Glycosyl transferase family 2 TSH58p_17825 PF00535 Glycosyl transferase family 2 TSH58p_17840 PF01050 Mannose-6-phosphate isomerase TSH58p_17840 PF00483 Nucleotidyl transferase TSH58p_17845 PF00535 Glycosyl transferase family 2 TSH58p_17850 PF00534 Glycosyl transferases group 1 TSH58p_17850 PF08323 Starch synthase catalytic domain TSH58p_17855 PF13439 Glycosyltransferase Family 4 TSH58p_17855 PF00534 Glycosyl transferases group 1 TSH58p_17860 PF00535 Glycosyl transferase family 2 TSH58p_17890 PF01507 Phosphoadenosine phosphosulfate reductase family TSH58p_17895 PF00009 Elongation factor Tu GTP binding domain TSH58p_17900 PF01370 NAD dependent epimerase/dehydratase family TSH58p_17910 PF08645 Polynucleotide kinase 3 phosphatase TSH58p_17915 PF13426 PAS domain TSH58p_17915 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase TSH58p_17915 PF00072 Response regulator receiver domain TSH58p_17950 PF00999 Sodium/hydrogen exchanger family TSH58p_17950 PF02254 TrkA-N domain TSH58p_17960 PF07167 Poly-beta-hydroxybutyrate polymerase (PhaC) N-terminus TSH58p_17960 PF00561 alpha/beta hydrolase fold TSH58p_17965 PF06055 Exopolysaccharide synthesis, ExoD TSH58p_18005 PF03466 LysR substrate binding domain TSH58p_18005 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family TSH58p_18015 PF01339 CheB methylesterase TSH58p_18015 PF03705 CheR methyltransferase, all-alpha domain TSH58p_18015 PF01739 CheR methyltransferase, SAM binding domain TSH58p_18015 PF08448 PAS fold TSH58p_18020 PF00239 Resolvase, N terminal domain TSH58p_18040 PF13614 AAA domain TSH58p_18045 PF02195 ParB-like nuclease domain TSH58p_18045 PF17762 HTH domain found in ParB protein TSH58p_18050 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II TSH58p_18050 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I TSH58p_18050 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III TSH58p_18050 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain TSH58p_18055 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain TSH58p_18055 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain TSH58p_18055 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain TSH58p_18065 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family TSH58p_18070 PF02719 Polysaccharide biosynthesis protein TSH58p_18080 PF03737 Aldolase/RraA TSH58p_18085 PF01970 Tripartite tricarboxylate transporter TctA family TSH58p_18095 PF00293 NUDIX domain TSH58p_18115 PF00696 Amino acid kinase family TSH58p_18120 PF00696 Amino acid kinase family TSH58p_18135 PF00919 Uncharacterized protein family UPF0004 TSH58p_18135 PF18693 TRAM domain TSH58p_18135 PF04055 Radical SAM superfamily TSH58p_18145 PF16363 GDP-mannose 4,6 dehydratase TSH58p_18180 PF05717 IS66 Orf2 like protein TSH58p_18205 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family TSH58p_18210 PF16363 GDP-mannose 4,6 dehydratase TSH58p_18225 PF00872 Transposase, Mutator family TSH58p_18260 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain TSH58p_18260 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain TSH58p_18260 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain TSH58p_18265 PF00535 Glycosyl transferase family 2 TSH58p_18280 PF01370 NAD dependent epimerase/dehydratase family TSH58p_18290 PF00005 ABC transporter TSH58p_18300 PF00535 Glycosyl transferase family 2 TSH58p_18335 PF00534 Glycosyl transferases group 1 TSH58p_18335 PF13439 Glycosyltransferase Family 4 TSH58p_18340 PF13847 Methyltransferase domain TSH58p_18340 PF10119 Predicted methyltransferase regulatory domain TSH58p_18345 PF13580 SIS domain TSH58p_18350 PF01266 FAD dependent oxidoreductase TSH58p_18355 PF00353 RTX calcium-binding nonapeptide repeat (4 copies) TSH58p_18355 PF00413 Matrixin TSH58p_18355 PF08548 Peptidase M10 serralysin C terminal TSH58p_18360 PF13439 Glycosyltransferase Family 4 TSH58p_18360 PF00534 Glycosyl transferases group 1 TSH58p_18365 PF00908 dTDP-4-dehydrorhamnose 3,5-epimerase TSH58p_18370 PF16363 GDP-mannose 4,6 dehydratase TSH58p_18375 PF04321 RmlD substrate binding domain TSH58p_18380 PF00483 Nucleotidyl transferase TSH58p_18400 PF03412 Peptidase C39 family TSH58p_18400 PF00005 ABC transporter TSH58p_18400 PF00664 ABC transporter transmembrane region TSH58p_18405 PF00535 Glycosyl transferase family 2 TSH58p_18410 PF01370 NAD dependent epimerase/dehydratase family TSH58p_18415 PF00005 ABC transporter TSH58p_18420 PF01061 ABC-2 type transporter TSH58p_18425 PF16363 GDP-mannose 4,6 dehydratase TSH58p_18430 PF16363 GDP-mannose 4,6 dehydratase TSH58p_18440 PF03275 UDP-galactopyranose mutase TSH58p_18450 PF00535 Glycosyl transferase family 2 TSH58p_18470 PF00132 Bacterial transferase hexapeptide (six repeats) TSH58p_18530 PF07729 FCD domain TSH58p_18530 PF00392 Bacterial regulatory proteins, gntR family TSH58p_18540 PF07883 Cupin domain TSH58p_18560 PF00248 Aldo/keto reductase family TSH58p_18565 PF07729 FCD domain TSH58p_18565 PF00392 Bacterial regulatory proteins, gntR family TSH58p_18570 PF02142 MGS-like domain TSH58p_18580 PF02614 Glucuronate isomerase TSH58p_18585 PF04295 D-galactarate dehydratase / Altronate hydrolase, C terminus TSH58p_18585 PF08666 SAF domain TSH58p_18590 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family TSH58p_18590 PF03466 LysR substrate binding domain TSH58p_18615 PF01970 Tripartite tricarboxylate transporter TctA family TSH58p_18620 PF03741 Integral membrane protein TerC family TSH58p_18630 PF00072 Response regulator receiver domain TSH58p_18630 PF00486 Transcriptional regulatory protein, C terminal TSH58p_18635 PF00672 HAMP domain TSH58p_18635 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase TSH58p_18635 PF00512 His Kinase A (phospho-acceptor) domain TSH58p_18640 PF12801 4Fe-4S binding domain TSH58p_18640 PF13746 4Fe-4S dicluster domain TSH58p_18640 PF11614 IG-like fold at C-terminal of FixG, putative oxidoreductase TSH58p_18655 PF01116 Fructose-bisphosphate aldolase class-II TSH58p_18660 PF08450 SMP-30/Gluconolactonase/LRE-like region TSH58p_18665 PF00311 Phosphoenolpyruvate carboxylase TSH58p_18670 PF00392 Bacterial regulatory proteins, gntR family TSH58p_18670 PF00155 Aminotransferase class I and II TSH58p_18675 PF11614 IG-like fold at C-terminal of FixG, putative oxidoreductase TSH58p_18675 PF12801 4Fe-4S binding domain TSH58p_18675 PF13746 4Fe-4S dicluster domain TSH58p_18685 PF01323 DSBA-like thioredoxin domain TSH58p_18690 PF00072 Response regulator receiver domain TSH58p_18690 PF00486 Transcriptional regulatory protein, C terminal TSH58p_18725 PF05690 Thiazole biosynthesis protein ThiG TSH58p_18735 PF01266 FAD dependent oxidoreductase TSH58p_18735 PF05690 Thiazole biosynthesis protein ThiG TSH58p_18740 PF01769 Divalent cation transporter TSH58p_18740 PF00571 CBS domain TSH58p_18740 PF03448 MgtE intracellular N domain TSH58p_18755 PF03099 Biotin/lipoate A/B protein ligase family TSH58p_18765 PF00708 Acylphosphatase TSH58p_18790 PF13442 Cytochrome C oxidase, cbb3-type, subunit III TSH58p_18800 PF03180 NLPA lipoprotein TSH58p_18805 PF00501 AMP-binding enzyme TSH58p_18805 PF13193 AMP-binding enzyme C-terminal domain TSH58p_18810 PF00005 ABC transporter TSH58p_18810 PF09383 NIL domain TSH58p_18815 PF00528 Binding-protein-dependent transport system inner membrane component TSH58p_18820 PF03180 NLPA lipoprotein TSH58p_18830 PF01263 Aldose 1-epimerase TSH58p_18835 PF08125 Mannitol dehydrogenase C-terminal domain TSH58p_18835 PF01232 Mannitol dehydrogenase Rossmann domain TSH58p_18850 PF00528 Binding-protein-dependent transport system inner membrane component TSH58p_18860 PF04230 Polysaccharide pyruvyl transferase TSH58p_18865 PF07732 Multicopper oxidase TSH58p_18865 PF00394 Multicopper oxidase TSH58p_18865 PF07731 Multicopper oxidase TSH58p_18875 PF00440 Bacterial regulatory proteins, tetR family TSH58p_18880 PF13533 Biotin-lipoyl like TSH58p_18885 PF00873 AcrB/AcrD/AcrF family TSH58p_18890 PF05368 NmrA-like family TSH58p_18895 PF01638 HxlR-like helix-turn-helix TSH58p_18900 PF00199 Catalase TSH58p_18900 PF06628 Catalase-related immune-responsive TSH58p_18905 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family TSH58p_18905 PF03466 LysR substrate binding domain TSH58p_18910 PF00588 SpoU rRNA Methylase family TSH58p_18920 PF07995 Glucose / Sorbosone dehydrogenase TSH58p_18955 PF03786 D-mannonate dehydratase (UxuA) TSH58p_18960 PF01232 Mannitol dehydrogenase Rossmann domain TSH58p_18960 PF08125 Mannitol dehydrogenase C-terminal domain TSH58p_18985 PF00871 Acetokinase family TSH58p_18990 PF01515 Phosphate acetyl/butaryl transferase TSH58p_18995 PF00113 Enolase, C-terminal TIM barrel domain TSH58p_18995 PF03952 Enolase, N-terminal domain TSH58p_19000 PF02901 Pyruvate formate lyase-like TSH58p_19000 PF01228 Glycine radical TSH58p_19005 PF02685 Glucokinase TSH58p_19005 PF01418 Helix-turn-helix domain, rpiR family TSH58p_19005 PF01380 SIS domain TSH58p_19020 PF00873 AcrB/AcrD/AcrF family TSH58p_19025 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion TSH58p_19025 PF00529 HlyD membrane-fusion protein of T1SS TSH58p_19030 PF00440 Bacterial regulatory proteins, tetR family TSH58p_19035 PF00440 Bacterial regulatory proteins, tetR family TSH58p_19040 PF00989 PAS fold TSH58p_19040 PF16736 Single Cache-like TSH58p_19040 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase TSH58p_19040 PF00512 His Kinase A (phospho-acceptor) domain TSH58p_19045 PF01590 GAF domain TSH58p_19045 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase TSH58p_19045 PF00512 His Kinase A (phospho-acceptor) domain TSH58p_19045 PF08446 PAS fold TSH58p_19045 PF00360 Phytochrome region TSH58p_19050 PF02887 Pyruvate kinase, alpha/beta domain TSH58p_19050 PF00224 Pyruvate kinase, barrel domain TSH58p_19055 PF04055 Radical SAM superfamily TSH58p_19060 PF01226 Formate/nitrite transporter TSH58p_19065 PF00892 EamA-like transporter family TSH58p_19070 PF00392 Bacterial regulatory proteins, gntR family TSH58p_19070 PF07729 FCD domain TSH58p_19075 PF03480 Bacterial extracellular solute-binding protein, family 7 TSH58p_19085 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component TSH58p_19090 PF03741 Integral membrane protein TerC family TSH58p_19095 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain TSH58p_19095 PF00672 HAMP domain TSH58p_19115 PF00313 'Cold-shock' DNA-binding domain TSH58p_19120 PF07559 Flagellar basal body protein FlaE TSH58p_19120 PF00460 Flagella basal body rod protein TSH58p_19120 PF06429 Flagellar basal body rod FlgEFG protein C-terminal TSH58p_19125 PF06429 Flagellar basal body rod FlgEFG protein C-terminal TSH58p_19125 PF00460 Flagella basal body rod protein TSH58p_19135 PF02119 Flagellar P-ring protein TSH58p_19160 PF01312 FlhB HrpN YscU SpaS Family TSH58p_19165 PF01311 Bacterial export proteins, family 1 TSH58p_19170 PF00771 FHIPEP family TSH58p_19180 PF01313 Bacterial export proteins, family 3 TSH58p_19185 PF02049 Flagellar hook-basal body complex protein FliE TSH58p_19190 PF06429 Flagellar basal body rod FlgEFG protein C-terminal TSH58p_19190 PF00460 Flagella basal body rod protein TSH58p_19195 PF00460 Flagella basal body rod protein TSH58p_19200 PF18269 T3SS EscN ATPase C-terminal domain TSH58p_19200 PF02874 ATP synthase alpha/beta family, beta-barrel domain TSH58p_19200 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain TSH58p_19210 PF03466 LysR substrate binding domain TSH58p_19210 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family TSH58p_19215 PF07690 Major Facilitator Superfamily TSH58p_19235 PF07378 Flagellar protein FlbT TSH58p_19245 PF00700 Bacterial flagellin C-terminal helical region TSH58p_19245 PF00669 Bacterial flagellin N-terminal helical region TSH58p_19250 PF00486 Transcriptional regulatory protein, C terminal TSH58p_19250 PF00072 Response regulator receiver domain TSH58p_19270 PF00294 pfkB family carbohydrate kinase TSH58p_19275 PF00392 Bacterial regulatory proteins, gntR family TSH58p_19275 PF07729 FCD domain TSH58p_19280 PF01081 KDPG and KHG aldolase TSH58p_19290 PF00174 Oxidoreductase molybdopterin binding domain TSH58p_19295 PF01794 Ferric reductase like transmembrane component TSH58p_19300 PF00005 ABC transporter TSH58p_19320 PF02222 ATP-grasp domain TSH58p_19330 PF00510 Cytochrome c oxidase subunit III TSH58p_19335 PF02515 CoA-transferase family III TSH58p_19345 PF03466 LysR substrate binding domain TSH58p_19345 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family TSH58p_19350 PF02771 Acyl-CoA dehydrogenase, N-terminal domain TSH58p_19350 PF00441 Acyl-CoA dehydrogenase, C-terminal domain TSH58p_19350 PF02770 Acyl-CoA dehydrogenase, middle domain TSH58p_19355 PF00676 Dehydrogenase E1 component TSH58p_19355 PF16870 2-oxoglutarate dehydrogenase C-terminal TSH58p_19355 PF02779 Transketolase, pyrimidine binding domain TSH58p_19355 PF16078 2-oxoglutarate dehydrogenase N-terminus TSH58p_19360 PF03480 Bacterial extracellular solute-binding protein, family 7 TSH58p_19370 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component TSH58p_19375 PF02558 Ketopantoate reductase PanE/ApbA TSH58p_19375 PF08546 Ketopantoate reductase PanE/ApbA C terminal TSH58p_19380 PF00171 Aldehyde dehydrogenase family TSH58p_19385 PF01565 FAD binding domain TSH58p_19385 PF02913 FAD linked oxidases, C-terminal domain TSH58p_19390 PF01012 Electron transfer flavoprotein domain TSH58p_19395 PF00766 Electron transfer flavoprotein FAD-binding domain TSH58p_19395 PF01012 Electron transfer flavoprotein domain TSH58p_19415 PF01425 Amidase TSH58p_19425 PF00941 FAD binding domain in molybdopterin dehydrogenase TSH58p_19425 PF03450 CO dehydrogenase flavoprotein C-terminal domain TSH58p_19430 PF01315 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain TSH58p_19430 PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase TSH58p_19435 PF00005 ABC transporter TSH58p_19440 PF00005 ABC transporter TSH58p_19440 PF12399 Branched-chain amino acid ATP-binding cassette transporter TSH58p_19450 PF02653 Branched-chain amino acid transport system / permease component TSH58p_19470 PF01979 Amidohydrolase family TSH58p_19490 PF13458 Periplasmic binding protein TSH58p_19495 PF02653 Branched-chain amino acid transport system / permease component TSH58p_19500 PF11862 Domain of unknown function (DUF3382) TSH58p_19500 PF02653 Branched-chain amino acid transport system / permease component TSH58p_19505 PF12399 Branched-chain amino acid ATP-binding cassette transporter TSH58p_19505 PF00005 ABC transporter TSH58p_19510 PF00005 ABC transporter TSH58p_19515 PF01494 FAD binding domain TSH58p_19520 PF17645 Arylmalonate decarboxylase TSH58p_19525 PF00561 alpha/beta hydrolase fold TSH58p_19535 PF00857 Isochorismatase family TSH58p_19545 PF00356 Bacterial regulatory proteins, lacI family TSH58p_19550 PF00391 PEP-utilising enzyme, mobile domain TSH58p_19550 PF02896 PEP-utilising enzyme, TIM barrel domain TSH58p_19550 PF00381 PTS HPr component phosphorylation site TSH58p_19550 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 TSH58p_19550 PF05524 PEP-utilising enzyme, N-terminal TSH58p_19555 PF00294 pfkB family carbohydrate kinase TSH58p_19560 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit TSH58p_19570 PF13581 Histidine kinase-like ATPase domain TSH58p_19570 PF07568 Histidine kinase TSH58p_19570 PF13426 PAS domain TSH58p_19575 PF00072 Response regulator receiver domain TSH58p_19575 PF00196 Bacterial regulatory proteins, luxR family TSH58p_19605 PF01266 FAD dependent oxidoreductase TSH58p_19620 PF00005 ABC transporter TSH58p_19625 PF00005 ABC transporter TSH58p_19625 PF12399 Branched-chain amino acid ATP-binding cassette transporter TSH58p_19630 PF11862 Domain of unknown function (DUF3382) TSH58p_19630 PF02653 Branched-chain amino acid transport system / permease component TSH58p_19635 PF02653 Branched-chain amino acid transport system / permease component TSH58p_19650 PF00291 Pyridoxal-phosphate dependent enzyme TSH58p_19655 PF01042 Endoribonuclease L-PSP TSH58p_19660 PF01037 Lrp/AsnC ligand binding domain TSH58p_19670 PF09339 IclR helix-turn-helix domain TSH58p_19670 PF01614 Bacterial transcriptional regulator TSH58p_19675 PF01515 Phosphate acetyl/butaryl transferase TSH58p_19695 PF00171 Aldehyde dehydrogenase family TSH58p_19700 PF00549 CoA-ligase TSH58p_19700 PF08442 ATP-grasp domain TSH58p_19705 PF02629 CoA binding domain TSH58p_19705 PF00549 CoA-ligase TSH58p_19710 PF00384 Molybdopterin oxidoreductase TSH58p_19710 PF01568 Molydopterin dinucleotide binding domain TSH58p_19710 PF04879 Molybdopterin oxidoreductase Fe4S4 domain TSH58p_19715 PF13247 4Fe-4S dicluster domain TSH58p_19715 PF12800 4Fe-4S binding domain TSH58p_19730 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain TSH58p_19730 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain TSH58p_19730 PF00205 Thiamine pyrophosphate enzyme, central domain TSH58p_19735 PF17762 HTH domain found in ParB protein TSH58p_19735 PF02195 ParB-like nuclease domain TSH58p_19740 PF13614 AAA domain TSH58p_19760 PF13419 Haloacid dehalogenase-like hydrolase TSH58p_19765 PF02805 Metal binding domain of Ada TSH58p_19765 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain TSH58p_19765 PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain TSH58p_19765 PF12833 Helix-turn-helix domain TSH58p_19770 PF03601 Conserved hypothetical protein 698 TSH58p_19800 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase TSH58p_19800 PF00512 His Kinase A (phospho-acceptor) domain TSH58p_19800 PF00989 PAS fold TSH58p_19810 PF06745 KaiC TSH58p_19815 PF00072 Response regulator receiver domain TSH58p_19815 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase TSH58p_19815 PF13426 PAS domain TSH58p_19840 PF00171 Aldehyde dehydrogenase family TSH58p_19845 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain TSH58p_19845 PF00205 Thiamine pyrophosphate enzyme, central domain TSH58p_19845 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain TSH58p_19850 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family TSH58p_19850 PF03466 LysR substrate binding domain TSH58p_19865 PF03466 LysR substrate binding domain TSH58p_19865 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family TSH58p_19870 PF13180 PDZ domain TSH58p_19870 PF03572 Peptidase family S41 TSH58p_19875 PF07043 Protein of unknown function (DUF1328) TSH58p_19885 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase TSH58p_19885 PF00512 His Kinase A (phospho-acceptor) domain TSH58p_19885 PF00989 PAS fold TSH58p_19895 PF00205 Thiamine pyrophosphate enzyme, central domain TSH58p_19895 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain TSH58p_19895 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain TSH58p_19905 PF01037 Lrp/AsnC ligand binding domain TSH58p_19915 PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase TSH58p_19920 PF00111 2Fe-2S iron-sulfur cluster binding domain TSH58p_19920 PF01799 [2Fe-2S] binding domain TSH58p_19925 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family TSH58p_19925 PF03466 LysR substrate binding domain TSH58p_19930 PF00563 EAL domain TSH58p_19930 PF00990 Diguanylate cyclase, GGDEF domain TSH58p_19930 PF03707 Bacterial signalling protein N terminal repeat TSH58p_19930 PF13188 PAS domain TSH58p_19940 PF00512 His Kinase A (phospho-acceptor) domain TSH58p_19940 PF02743 Cache domain TSH58p_19940 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase TSH58p_19945 PF00072 Response regulator receiver domain TSH58p_19945 PF02954 Bacterial regulatory protein, Fis family TSH58p_19945 PF00158 Sigma-54 interaction domain TSH58p_19950 PF00155 Aminotransferase class I and II TSH58p_19955 PF06826 Predicted Permease Membrane Region TSH58p_19955 PF02080 TrkA-C domain TSH58p_19970 PF00528 Binding-protein-dependent transport system inner membrane component TSH58p_19975 PF08402 TOBE domain TSH58p_19975 PF00005 ABC transporter TSH58p_19980 PF13419 Haloacid dehalogenase-like hydrolase TSH58p_19985 PF00300 Histidine phosphatase superfamily (branch 1) TSH58p_20000 PF00465 Iron-containing alcohol dehydrogenase TSH58p_20000 PF00171 Aldehyde dehydrogenase family TSH58p_20005 PF02954 Bacterial regulatory protein, Fis family TSH58p_20005 PF00158 Sigma-54 interaction domain TSH58p_20005 PF00072 Response regulator receiver domain TSH58p_20080 PF03466 LysR substrate binding domain TSH58p_20080 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family TSH58p_20100 PF07690 Major Facilitator Superfamily TSH58p_20105 PF13677 Membrane MotB of proton-channel complex MotA/MotB TSH58p_20105 PF00691 OmpA family TSH58p_20110 PF01618 MotA/TolQ/ExbB proton channel family TSH58p_20120 PF06429 Flagellar basal body rod FlgEFG protein C-terminal TSH58p_20120 PF00460 Flagella basal body rod protein TSH58p_20125 PF06429 Flagellar basal body rod FlgEFG protein C-terminal TSH58p_20125 PF00460 Flagella basal body rod protein TSH58p_20130 PF13144 Chaperone for flagella basal body P-ring formation TSH58p_20135 PF02107 Flagellar L-ring protein TSH58p_20155 PF00384 Molybdopterin oxidoreductase TSH58p_20155 PF01568 Molydopterin dinucleotide binding domain TSH58p_20155 PF04879 Molybdopterin oxidoreductase Fe4S4 domain TSH58p_20160 PF03892 Nitrate reductase cytochrome c-type subunit (NapB) TSH58p_20165 PF03264 NapC/NirT cytochrome c family, N-terminal region TSH58p_20210 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term TSH58p_20210 PF02154 Flagellar motor switch protein FliM TSH58p_20220 PF08345 Flagellar M-ring protein C-terminal TSH58p_20220 PF01514 Secretory protein of YscJ/FliF family TSH58p_20230 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term TSH58p_20235 PF00813 FliP family TSH58p_20245 PF14842 FliG N-terminal domain TSH58p_20245 PF14841 FliG middle domain TSH58p_20245 PF01706 FliG C-terminal domain TSH58p_20255 PF08281 Sigma-70, region 4 TSH58p_20255 PF04542 Sigma-70 region 2 TSH58p_20265 PF00486 Transcriptional regulatory protein, C terminal TSH58p_20265 PF00072 Response regulator receiver domain TSH58p_20290 PF01914 MarC family integral membrane protein TSH58p_20295 PF02812 Glu/Leu/Phe/Val dehydrogenase, dimerisation domain TSH58p_20295 PF00208 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase TSH58p_20300 PF09849 Uncharacterized protein conserved in bacteria (DUF2076) TSH58p_20305 PF01594 AI-2E family transporter TSH58p_20310 PF13419 Haloacid dehalogenase-like hydrolase TSH58p_20315 PF00781 Diacylglycerol kinase catalytic domain TSH58p_20325 PF04962 KduI/IolB family TSH58p_20330 PF07729 FCD domain TSH58p_20330 PF00392 Bacterial regulatory proteins, gntR family TSH58p_20335 PF03812 2-keto-3-deoxygluconate permease TSH58p_20345 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain TSH58p_20345 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain TSH58p_20350 PF00924 Mechanosensitive ion channel TSH58p_20370 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain TSH58p_20370 PF02777 Iron/manganese superoxide dismutases, C-terminal domain TSH58p_20395 PF07879 PHB/PHA accumulation regulator DNA-binding domain TSH58p_20395 PF05233 PHB accumulation regulatory domain TSH58p_20400 PF12697 Alpha/beta hydrolase family TSH58p_20400 PF08241 Methyltransferase domain TSH58p_20405 PF02803 Thiolase, C-terminal domain TSH58p_20405 PF00108 Thiolase, N-terminal domain TSH58p_20420 PF07690 Major Facilitator Superfamily TSH58p_20425 PF03466 LysR substrate binding domain TSH58p_20425 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family TSH58p_20435 PF00360 Phytochrome region TSH58p_20435 PF01590 GAF domain TSH58p_20435 PF00563 EAL domain TSH58p_20435 PF00990 Diguanylate cyclase, GGDEF domain TSH58p_20440 PF06071 Protein of unknown function (DUF933) TSH58p_20440 PF01926 50S ribosome-binding GTPase TSH58p_20460 PF01612 3'-5' exonuclease TSH58p_20460 PF00476 DNA polymerase family A TSH58p_20460 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain TSH58p_20460 PF01367 5'-3' exonuclease, C-terminal SAM fold TSH58p_20485 PF00005 ABC transporter TSH58p_20495 PF03707 Bacterial signalling protein N terminal repeat TSH58p_20495 PF00990 Diguanylate cyclase, GGDEF domain TSH58p_20495 PF00563 EAL domain TSH58p_20500 PF07729 FCD domain TSH58p_20500 PF00392 Bacterial regulatory proteins, gntR family TSH58p_20505 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain TSH58p_20505 PF00205 Thiamine pyrophosphate enzyme, central domain TSH58p_20505 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain TSH58p_20510 PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit TSH58p_20510 PF10531 SLBB domain TSH58p_20510 PF10589 NADH-ubiquinone oxidoreductase-F iron-sulfur binding region TSH58p_20515 PF10588 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region TSH58p_20515 PF12838 4Fe-4S dicluster domain TSH58p_20515 PF01568 Molydopterin dinucleotide binding domain TSH58p_20515 PF04879 Molybdopterin oxidoreductase Fe4S4 domain TSH58p_20515 PF00384 Molybdopterin oxidoreductase TSH58p_20520 PF01614 Bacterial transcriptional regulator TSH58p_20520 PF09339 IclR helix-turn-helix domain TSH58p_20530 PF00376 MerR family regulatory protein TSH58p_20530 PF09278 MerR, DNA binding TSH58p_20540 PF02515 CoA-transferase family III TSH58p_20545 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase TSH58p_20545 PF00512 His Kinase A (phospho-acceptor) domain TSH58p_20545 PF00989 PAS fold TSH58p_20555 PF07969 Amidohydrolase family TSH58p_20565 PF02653 Branched-chain amino acid transport system / permease component TSH58p_20590 PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase TSH58p_20590 PF00925 GTP cyclohydrolase II TSH58p_20605 PF00150 Cellulase (glycosyl hydrolase family 5) TSH58p_20715 PF00437 Type II/IV secretion system protein TSH58p_20730 PF04972 BON domain TSH58p_20730 PF13629 Pilus formation protein N terminal region TSH58p_20730 PF00263 Bacterial type II and III secretion system protein TSH58p_20750 PF03150 Di-haem cytochrome c peroxidase TSH58p_20785 PF01425 Amidase TSH58p_20790 PF02615 Malate/L-lactate dehydrogenase TSH58p_20800 PF13185 GAF domain TSH58p_20800 PF00990 Diguanylate cyclase, GGDEF domain TSH58p_20805 PF00860 Permease family TSH58p_20810 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase TSH58p_20810 PF13426 PAS domain TSH58p_20810 PF00072 Response regulator receiver domain TSH58p_20815 PF00664 ABC transporter transmembrane region TSH58p_20815 PF00005 ABC transporter TSH58p_20825 PF03275 UDP-galactopyranose mutase TSH58p_20840 PF00732 GMC oxidoreductase TSH58p_20840 PF05199 GMC oxidoreductase TSH58p_20850 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily TSH58p_20865 PF03466 LysR substrate binding domain TSH58p_20865 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family TSH58p_20870 PF12796 Ankyrin repeats (3 copies) TSH58p_20870 PF00023 Ankyrin repeat TSH58p_20885 PF04542 Sigma-70 region 2 TSH58p_20885 PF08281 Sigma-70, region 4 TSH58p_20905 PF03480 Bacterial extracellular solute-binding protein, family 7 TSH58p_20915 PF03328 HpcH/HpaI aldolase/citrate lyase family TSH58p_20925 PF03972 MmgE/PrpD family TSH58p_20930 PF02771 Acyl-CoA dehydrogenase, N-terminal domain TSH58p_20930 PF02770 Acyl-CoA dehydrogenase, middle domain TSH58p_20930 PF00441 Acyl-CoA dehydrogenase, C-terminal domain TSH58p_20935 PF02515 CoA-transferase family III TSH58p_20940 PF00392 Bacterial regulatory proteins, gntR family TSH58p_20940 PF07729 FCD domain TSH58p_20950 PF01425 Amidase TSH58p_20960 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component TSH58p_20965 PF07702 UTRA domain TSH58p_20965 PF00392 Bacterial regulatory proteins, gntR family TSH58p_20975 PF03960 ArsC family TSH58p_20980 PF01758 Sodium Bile acid symporter family TSH58p_20985 PF00528 Binding-protein-dependent transport system inner membrane component TSH58p_20985 PF12911 N-terminal TM domain of oligopeptide transport permease C TSH58p_20990 PF00528 Binding-protein-dependent transport system inner membrane component TSH58p_20995 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle TSH58p_21020 PF08446 PAS fold TSH58p_21020 PF01590 GAF domain TSH58p_21020 PF00512 His Kinase A (phospho-acceptor) domain TSH58p_21020 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase TSH58p_21020 PF00360 Phytochrome region TSH58p_21025 PF00072 Response regulator receiver domain TSH58p_21030 PF00512 His Kinase A (phospho-acceptor) domain TSH58p_21030 PF13188 PAS domain TSH58p_21030 PF08448 PAS fold TSH58p_21030 PF00072 Response regulator receiver domain TSH58p_21030 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase TSH58p_21035 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 TSH58p_21035 PF00381 PTS HPr component phosphorylation site TSH58p_21035 PF02896 PEP-utilising enzyme, TIM barrel domain TSH58p_21035 PF00391 PEP-utilising enzyme, mobile domain TSH58p_21035 PF05524 PEP-utilising enzyme, N-terminal TSH58p_21040 PF00294 pfkB family carbohydrate kinase TSH58p_21045 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit TSH58p_21045 PF02378 Phosphotransferase system, EIIC TSH58p_21050 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase TSH58p_21050 PF00512 His Kinase A (phospho-acceptor) domain TSH58p_21060 PF07715 TonB-dependent Receptor Plug Domain TSH58p_21060 PF00593 TonB dependent receptor TSH58p_21070 PF08281 Sigma-70, region 4 TSH58p_21070 PF04542 Sigma-70 region 2 TSH58p_21075 PF00912 Transglycosylase TSH58p_21075 PF00905 Penicillin binding protein transpeptidase domain TSH58p_21080 PF00132 Bacterial transferase hexapeptide (six repeats) TSH58p_21080 PF06426 Serine acetyltransferase, N-terminal TSH58p_21085 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family TSH58p_21085 PF03466 LysR substrate binding domain TSH58p_21095 PF00005 ABC transporter TSH58p_21095 PF08402 TOBE domain TSH58p_21100 PF00528 Binding-protein-dependent transport system inner membrane component TSH58p_21105 PF00528 Binding-protein-dependent transport system inner membrane component TSH58p_21110 PF00491 Arginase family TSH58p_21115 PF00795 Carbon-nitrogen hydrolase TSH58p_21120 PF13291 ACT domain TSH58p_21120 PF00291 Pyridoxal-phosphate dependent enzyme TSH58p_21125 PF00860 Permease family TSH58p_21130 PF00171 Aldehyde dehydrogenase family TSH58p_21135 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle TSH58p_21140 PF00528 Binding-protein-dependent transport system inner membrane component TSH58p_21145 PF00528 Binding-protein-dependent transport system inner membrane component TSH58p_21145 PF12911 N-terminal TM domain of oligopeptide transport permease C TSH58p_21150 PF00005 ABC transporter TSH58p_21150 PF08352 Oligopeptide/dipeptide transporter, C-terminal region TSH58p_21155 PF00005 ABC transporter TSH58p_21155 PF08352 Oligopeptide/dipeptide transporter, C-terminal region TSH58p_21160 PF07687 Peptidase dimerisation domain TSH58p_21160 PF01546 Peptidase family M20/M25/M40 TSH58p_21210 PF00483 Nucleotidyl transferase TSH58p_21215 PF00684 DnaJ central domain TSH58p_21215 PF01556 DnaJ C terminal domain TSH58p_21215 PF00226 DnaJ domain TSH58p_21225 PF00849 RNA pseudouridylate synthase TSH58p_21240 PF00155 Aminotransferase class I and II TSH58p_21250 PF13649 Methyltransferase domain TSH58p_21255 PF00202 Aminotransferase class-III TSH58p_21260 PF06968 Biotin and Thiamin Synthesis associated domain TSH58p_21260 PF04055 Radical SAM superfamily TSH58p_21270 PF02896 PEP-utilising enzyme, TIM barrel domain TSH58p_21270 PF01326 Pyruvate phosphate dikinase, PEP/pyruvate binding domain TSH58p_21270 PF00391 PEP-utilising enzyme, mobile domain TSH58p_21275 PF00144 Beta-lactamase TSH58p_21275 PF11954 Domain of unknown function (DUF3471) TSH58p_21280 PF03975 CheD chemotactic sensory transduction TSH58p_21285 PF00313 'Cold-shock' DNA-binding domain TSH58p_21290 PF00501 AMP-binding enzyme TSH58p_21290 PF13193 AMP-binding enzyme C-terminal domain TSH58p_21295 PF01370 NAD dependent epimerase/dehydratase family TSH58p_21300 PF01790 Prolipoprotein diacylglyceryl transferase TSH58p_21320 PF13793 N-terminal domain of ribose phosphate pyrophosphokinase TSH58p_21320 PF14572 Phosphoribosyl synthetase-associated domain TSH58p_21325 PF01386 Ribosomal L25p family TSH58p_21325 PF14693 Ribosomal protein TL5, C-terminal domain TSH58p_21330 PF01195 Peptidyl-tRNA hydrolase TSH58p_21335 PF02653 Branched-chain amino acid transport system / permease component TSH58p_21340 PF02653 Branched-chain amino acid transport system / permease component TSH58p_21345 PF00005 ABC transporter TSH58p_21350 PF13407 Periplasmic binding protein domain TSH58p_21355 PF00171 Aldehyde dehydrogenase family TSH58p_21360 PF00701 Dihydrodipicolinate synthetase family TSH58p_21370 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family TSH58p_21370 PF03466 LysR substrate binding domain TSH58p_21375 PF13407 Periplasmic binding protein domain TSH58p_21380 PF00005 ABC transporter TSH58p_21385 PF02653 Branched-chain amino acid transport system / permease component TSH58p_21390 PF01408 Oxidoreductase family, NAD-binding Rossmann fold TSH58p_21395 PF00920 Dehydratase family TSH58p_21410 PF00392 Bacterial regulatory proteins, gntR family TSH58p_21410 PF07729 FCD domain TSH58p_21420 PF07883 Cupin domain TSH58p_21425 PF03480 Bacterial extracellular solute-binding protein, family 7 TSH58p_21440 PF00248 Aldo/keto reductase family TSH58p_21445 PF00392 Bacterial regulatory proteins, gntR family TSH58p_21445 PF07729 FCD domain TSH58p_21465 PF08666 SAF domain TSH58p_21465 PF04295 D-galactarate dehydratase / Altronate hydrolase, C terminus TSH58p_21475 PF17209 Hfq protein TSH58p_21505 PF00672 HAMP domain TSH58p_21505 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase TSH58p_21510 PF02954 Bacterial regulatory protein, Fis family TSH58p_21510 PF00072 Response regulator receiver domain TSH58p_21510 PF00158 Sigma-54 interaction domain TSH58p_21520 PF02254 TrkA-N domain TSH58p_21520 PF02080 TrkA-C domain TSH58p_21525 PF01063 Amino-transferase class IV TSH58p_21535 PF17209 Hfq protein TSH58p_21540 PF13167 GTP-binding GTPase N-terminal TSH58p_21540 PF16360 GTP-binding GTPase Middle Region TSH58p_21540 PF01926 50S ribosome-binding GTPase TSH58p_21555 PF00459 Inositol monophosphatase family TSH58p_21570 PF03819 MazG nucleotide pyrophosphohydrolase domain TSH58p_21575 PF01058 NADH ubiquinone oxidoreductase, 20 Kd subunit TSH58p_21580 PF00346 Respiratory-chain NADH dehydrogenase, 49 Kd subunit TSH58p_21585 PF00361 Proton-conducting membrane transporter TSH58p_21595 PF00146 NADH dehydrogenase TSH58p_21600 PF00361 Proton-conducting membrane transporter TSH58p_21610 PF16921 Tex protein YqgF-like domain TSH58p_21610 PF09371 Tex-like protein N-terminal domain TSH58p_21610 PF00575 S1 RNA binding domain TSH58p_21610 PF17674 HHH domain TSH58p_21615 PF00563 EAL domain TSH58p_21615 PF00990 Diguanylate cyclase, GGDEF domain TSH58p_21615 PF03707 Bacterial signalling protein N terminal repeat TSH58p_21620 PF01810 LysE type translocator TSH58p_21650 PF01906 Putative heavy-metal-binding TSH58p_21655 PF00561 alpha/beta hydrolase fold TSH58p_21665 PF00072 Response regulator receiver domain TSH58p_21670 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle TSH58p_21675 PF02798 Glutathione S-transferase, N-terminal domain TSH58p_21675 PF00043 Glutathione S-transferase, C-terminal domain TSH58p_21680 PF03480 Bacterial extracellular solute-binding protein, family 7 TSH58p_21685 PF00128 Alpha amylase, catalytic domain TSH58p_21710 PF17200 Single Cache domain 2 TSH58p_21710 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain TSH58p_21710 PF00672 HAMP domain TSH58p_21725 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion TSH58p_21730 PF00873 AcrB/AcrD/AcrF family TSH58p_21745 PF00873 AcrB/AcrD/AcrF family TSH58p_21750 PF13533 Biotin-lipoyl like TSH58p_21755 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family TSH58p_21755 PF03466 LysR substrate binding domain TSH58p_21760 PF07286 Protein of unknown function (DUF1445) TSH58p_21780 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component TSH58p_21785 PF02682 Carboxyltransferase domain, subdomain C and D TSH58p_21790 PF02626 Carboxyltransferase domain, subdomain A and B TSH58p_21795 PF03746 LamB/YcsF family TSH58p_21800 PF00072 Response regulator receiver domain TSH58p_21800 PF02954 Bacterial regulatory protein, Fis family TSH58p_21800 PF00158 Sigma-54 interaction domain TSH58p_21805 PF02743 Cache domain TSH58p_21805 PF00512 His Kinase A (phospho-acceptor) domain TSH58p_21805 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase TSH58p_21810 PF00009 Elongation factor Tu GTP binding domain TSH58p_21810 PF16658 Class II release factor RF3, C-terminal domain TSH58p_21815 PF02774 Semialdehyde dehydrogenase, dimerisation domain TSH58p_21815 PF01118 Semialdehyde dehydrogenase, NAD binding domain TSH58p_21820 PF00343 Carbohydrate phosphorylase TSH58p_21830 PF02585 GlcNAc-PI de-N-acetylase TSH58p_21835 PF08281 Sigma-70, region 4 TSH58p_21835 PF04542 Sigma-70 region 2 TSH58p_21860 PF00999 Sodium/hydrogen exchanger family TSH58p_21865 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase TSH58p_21870 PF00072 Response regulator receiver domain TSH58p_21870 PF00486 Transcriptional regulatory protein, C terminal TSH58p_21900 PF02082 Transcriptional regulator TSH58p_21905 PF01458 Uncharacterized protein family (UPF0051) TSH58p_21910 PF00005 ABC transporter TSH58p_21915 PF01458 Uncharacterized protein family (UPF0051) TSH58p_21920 PF00266 Aminotransferase class-V TSH58p_21925 PF01592 NifU-like N terminal domain TSH58p_21930 PF10609 NUBPL iron-transfer P-loop NTPase TSH58p_21930 PF01883 Iron-sulfur cluster assembly protein TSH58p_21935 PF01521 Iron-sulphur cluster biosynthesis TSH58p_21955 PF01433 Peptidase family M1 domain TSH58p_21955 PF17432 Domain of unknown function (DUF3458_C) ARM repeats TSH58p_21955 PF11940 Domain of unknown function (DUF3458) Ig-like fold TSH58p_21960 PF00034 Cytochrome c TSH58p_21975 PF01288 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK) TSH58p_22010 PF11154 Protein of unknown function (DUF2934) TSH58p_22010 PF00430 ATP synthase B/B' CF(0) TSH58p_22015 PF00892 EamA-like transporter family TSH58p_22020 PF00072 Response regulator receiver domain TSH58p_22020 PF01627 Hpt domain TSH58p_22020 PF17149 Periplasmic sensor domain found in signal transduction proteins TSH58p_22020 PF00512 His Kinase A (phospho-acceptor) domain TSH58p_22020 PF00672 HAMP domain TSH58p_22020 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase TSH58p_22025 PF07690 Major Facilitator Superfamily TSH58p_22030 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family TSH58p_22030 PF03466 LysR substrate binding domain TSH58p_22040 PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit TSH58p_22040 PF00037 4Fe-4S binding domain TSH58p_22040 PF10589 NADH-ubiquinone oxidoreductase-F iron-sulfur binding region TSH58p_22045 PF10588 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region TSH58p_22045 PF04879 Molybdopterin oxidoreductase Fe4S4 domain TSH58p_22045 PF12838 4Fe-4S dicluster domain TSH58p_22045 PF01568 Molydopterin dinucleotide binding domain TSH58p_22045 PF00384 Molybdopterin oxidoreductase TSH58p_22050 PF02634 FdhD/NarQ family TSH58p_22065 PF04055 Radical SAM superfamily TSH58p_22065 PF00919 Uncharacterized protein family UPF0004 TSH58p_22065 PF18693 TRAM domain TSH58p_22070 PF01588 Putative tRNA binding domain TSH58p_22090 PF16360 GTP-binding GTPase Middle Region TSH58p_22090 PF13167 GTP-binding GTPase N-terminal TSH58p_22090 PF01926 50S ribosome-binding GTPase TSH58p_22100 PF00920 Dehydratase family TSH58p_22115 PF13426 PAS domain TSH58p_22115 PF13581 Histidine kinase-like ATPase domain TSH58p_22115 PF07568 Histidine kinase TSH58p_22140 PF01467 Cytidylyltransferase-like TSH58p_22145 PF00521 DNA gyrase/topoisomerase IV, subunit A TSH58p_22145 PF03989 DNA gyrase C-terminal domain, beta-propeller TSH58p_22150 PF01554 MatE TSH58p_22195 PF00004 ATPase family associated with various cellular activities (AAA) TSH58p_22195 PF05362 Lon protease (S16) C-terminal proteolytic domain TSH58p_22195 PF02190 ATP-dependent protease La (LON) substrate-binding domain TSH58p_22235 PF00115 Cytochrome C and Quinol oxidase polypeptide I TSH58p_22280 PF00873 AcrB/AcrD/AcrF family TSH58p_22300 PF04945 YHS domain TSH58p_22350 PF00589 Phage integrase family TSH58p_22350 PF02899 Phage integrase, N-terminal SAM-like domain TSH58p_22355 PF00436 Single-strand binding protein family TSH58p_22360 PF17755 UvrA DNA-binding domain TSH58p_22360 PF17760 UvrA interaction domain TSH58p_22375 PF01134 Glucose inhibited division protein A TSH58p_22400 PF01593 Flavin containing amine oxidoreductase TSH58p_22405 PF02777 Iron/manganese superoxide dismutases, C-terminal domain TSH58p_22405 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain TSH58p_22410 PF04430 Protein of unknown function (DUF498/DUF598) TSH58p_22420 PF02699 Preprotein translocase subunit TSH58p_22435 PF01551 Peptidase family M23 TSH58p_22435 PF01476 LysM domain TSH58p_22445 PF01975 Survival protein SurE TSH58p_22450 PF02403 Seryl-tRNA synthetase N-terminal domain TSH58p_22450 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) TSH58p_22455 PF00990 Diguanylate cyclase, GGDEF domain TSH58p_22460 PF00902 Sec-independent protein translocase protein (TatC) TSH58p_22465 PF02416 mttA/Hcf106 family TSH58p_22470 PF02416 mttA/Hcf106 family TSH58p_22475 PF08402 TOBE domain TSH58p_22475 PF00005 ABC transporter TSH58p_22480 PF04079 Segregation and condensation complex subunit ScpB TSH58p_22485 PF02616 Segregation and condensation protein ScpA TSH58p_22490 PF02163 Peptidase family M50 TSH58p_22495 PF00933 Glycosyl hydrolase family 3 N terminal domain TSH58p_22505 PF03485 Arginyl tRNA synthetase N terminal domain TSH58p_22505 PF05746 DALR anticodon binding domain TSH58p_22505 PF00750 tRNA synthetases class I (R) TSH58p_22510 PF13286 Phosphohydrolase-associated domain TSH58p_22510 PF01966 HD domain TSH58p_22515 PF01521 Iron-sulphur cluster biosynthesis TSH58p_22520 PF03372 Endonuclease/Exonuclease/phosphatase family TSH58p_22605 PF00004 ATPase family associated with various cellular activities (AAA) TSH58p_22620 PF00959 Phage lysozyme TSH58p_22800 PF02899 Phage integrase, N-terminal SAM-like domain TSH58p_22800 PF00589 Phage integrase family TSH58p_22810 PF00117 Glutamine amidotransferase class-I TSH58p_22810 PF00958 GMP synthase C terminal domain TSH58p_22810 PF02540 NAD synthase TSH58p_22815 PF00583 Acetyltransferase (GNAT) family TSH58p_22830 PF01029 NusB family TSH58p_22830 PF01189 16S rRNA methyltransferase RsmB/F TSH58p_22845 PF07536 HWE histidine kinase TSH58p_22845 PF13426 PAS domain TSH58p_22850 PF06906 Protein of unknown function (DUF1272) TSH58p_22855 PF00588 SpoU rRNA Methylase family TSH58p_22855 PF02527 rRNA small subunit methyltransferase G TSH58p_22860 PF00571 CBS domain TSH58p_22860 PF00478 IMP dehydrogenase / GMP reductase domain TSH58p_22865 PF01728 FtsJ-like methyltransferase TSH58p_22880 PF00072 Response regulator receiver domain TSH58p_22880 PF00990 Diguanylate cyclase, GGDEF domain TSH58p_22885 PF00694 Aconitase C-terminal domain TSH58p_22890 PF00330 Aconitase family (aconitate hydratase) TSH58p_22900 PF00857 Isochorismatase family TSH58p_22905 PF01968 Hydantoinase/oxoprolinase TSH58p_22905 PF05378 Hydantoinase/oxoprolinase N-terminal region TSH58p_22910 PF02538 Hydantoinase B/oxoprolinase TSH58p_22925 PF00005 ABC transporter TSH58p_22930 PF00005 ABC transporter TSH58p_22930 PF12399 Branched-chain amino acid ATP-binding cassette transporter TSH58p_22935 PF02653 Branched-chain amino acid transport system / permease component TSH58p_22935 PF11862 Domain of unknown function (DUF3382) TSH58p_22940 PF02653 Branched-chain amino acid transport system / permease component TSH58p_22945 PF13458 Periplasmic binding protein TSH58p_22950 PF00392 Bacterial regulatory proteins, gntR family TSH58p_22950 PF07702 UTRA domain TSH58p_22955 PF09723 Zinc ribbon domain TSH58p_22960 PF03069 Acetamidase/Formamidase family TSH58p_22970 PF00005 ABC transporter TSH58p_22975 PF00005 ABC transporter TSH58p_22975 PF12399 Branched-chain amino acid ATP-binding cassette transporter TSH58p_22995 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase TSH58p_22995 PF18415 Histidine kinase receptor ArcB trans-membrane domain TSH58p_22995 PF01627 Hpt domain TSH58p_22995 PF00072 Response regulator receiver domain TSH58p_22995 PF00512 His Kinase A (phospho-acceptor) domain TSH58p_22995 PF00989 PAS fold TSH58p_23000 PF00072 Response regulator receiver domain TSH58p_23005 PF00092 von Willebrand factor type A domain TSH58p_23010 PF07728 AAA domain (dynein-related subfamily) TSH58p_23010 PF08406 CbbQ/NirQ/NorQ C-terminal TSH58p_23015 PF00795 Carbon-nitrogen hydrolase TSH58p_23020 PF00106 short chain dehydrogenase TSH58p_23025 PF01965 DJ-1/PfpI family TSH58p_23025 PF12833 Helix-turn-helix domain TSH58p_23030 PF00005 ABC transporter TSH58p_23030 PF08352 Oligopeptide/dipeptide transporter, C-terminal region TSH58p_23035 PF08352 Oligopeptide/dipeptide transporter, C-terminal region TSH58p_23035 PF00005 ABC transporter TSH58p_23040 PF00528 Binding-protein-dependent transport system inner membrane component TSH58p_23040 PF12911 N-terminal TM domain of oligopeptide transport permease C TSH58p_23045 PF00528 Binding-protein-dependent transport system inner membrane component TSH58p_23050 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle TSH58p_23060 PF10397 Adenylosuccinate lyase C-terminus TSH58p_23060 PF00206 Lyase TSH58p_23065 PF02515 CoA-transferase family III TSH58p_23075 PF00375 Sodium:dicarboxylate symporter family TSH58p_23080 PF04303 PrpF protein TSH58p_23085 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family TSH58p_23085 PF03466 LysR substrate binding domain TSH58p_23095 PF01915 Glycosyl hydrolase family 3 C-terminal domain TSH58p_23095 PF00933 Glycosyl hydrolase family 3 N terminal domain TSH58p_23095 PF14310 Fibronectin type III-like domain TSH58p_23105 PF00072 Response regulator receiver domain TSH58p_23105 PF00486 Transcriptional regulatory protein, C terminal TSH58p_23110 PF00672 HAMP domain TSH58p_23110 PF00512 His Kinase A (phospho-acceptor) domain TSH58p_23110 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase TSH58p_23115 PF00072 Response regulator receiver domain TSH58p_23115 PF00158 Sigma-54 interaction domain TSH58p_23120 PF00512 His Kinase A (phospho-acceptor) domain TSH58p_23120 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase TSH58p_23125 PF01073 3-beta hydroxysteroid dehydrogenase/isomerase family TSH58p_23150 PF03852 DNA mismatch endonuclease Vsr TSH58p_23170 PF00145 C-5 cytosine-specific DNA methylase TSH58p_23195 PF00239 Resolvase, N terminal domain TSH58p_23250 PF03459 TOBE domain TSH58p_23250 PF00005 ABC transporter TSH58p_23255 PF00528 Binding-protein-dependent transport system inner membrane component TSH58p_23265 PF03459 TOBE domain TSH58p_23265 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family TSH58p_23280 PF03350 Uncharacterized protein family, UPF0114 TSH58p_23385 PF00004 ATPase family associated with various cellular activities (AAA) TSH58p_23385 PF07724 AAA domain (Cdc48 subfamily) TSH58p_23385 PF17871 AAA lid domain TSH58p_23385 PF10431 C-terminal, D2-small domain, of ClpB protein TSH58p_23390 PF04717 Type VI secretion system, phage-baseplate injector TSH58p_23405 PF00817 impB/mucB/samB family TSH58p_23405 PF11799 impB/mucB/samB family C-terminal domain TSH58p_23425 PF07715 TonB-dependent Receptor Plug Domain TSH58p_23425 PF00593 TonB dependent receptor TSH58p_23430 PF05977 Transmembrane secretion effector TSH58p_23440 PF00873 AcrB/AcrD/AcrF family TSH58p_23445 PF00425 chorismate binding enzyme TSH58p_23450 PF13193 AMP-binding enzyme C-terminal domain TSH58p_23450 PF00501 AMP-binding enzyme TSH58p_23455 PF00550 Phosphopantetheine attachment site TSH58p_23455 PF00857 Isochorismatase family TSH58p_23470 PF00550 Phosphopantetheine attachment site TSH58p_23470 PF00668 Condensation domain TSH58p_23470 PF13193 AMP-binding enzyme C-terminal domain TSH58p_23470 PF00975 Thioesterase domain TSH58p_23470 PF00501 AMP-binding enzyme TSH58p_23475 PF11806 Domain of unknown function (DUF3327) TSH58p_23475 PF00756 Putative esterase TSH58p_23485 PF04542 Sigma-70 region 2 TSH58p_23485 PF04545 Sigma-70, region 4 TSH58p_23490 PF02954 Bacterial regulatory protein, Fis family TSH58p_23490 PF00158 Sigma-54 interaction domain TSH58p_23490 PF13185 GAF domain TSH58p_23495 PF01228 Glycine radical TSH58p_23495 PF02901 Pyruvate formate lyase-like TSH58p_23505 PF02470 MlaD protein TSH58p_23510 PF04403 Paraquat-inducible protein A TSH58p_23525 PF03949 Malic enzyme, NAD binding domain TSH58p_23525 PF00390 Malic enzyme, N-terminal domain TSH58p_23525 PF01515 Phosphate acetyl/butaryl transferase TSH58p_23530 PF00375 Sodium:dicarboxylate symporter family TSH58p_23535 PF00512 His Kinase A (phospho-acceptor) domain TSH58p_23535 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase TSH58p_23540 PF00072 Response regulator receiver domain TSH58p_23540 PF00158 Sigma-54 interaction domain TSH58p_23540 PF02954 Bacterial regulatory protein, Fis family TSH58p_23555 PF02632 BioY family TSH58p_23560 PF02785 Biotin carboxylase C-terminal domain TSH58p_23560 PF00289 Biotin carboxylase, N-terminal domain TSH58p_23560 PF00364 Biotin-requiring enzyme TSH58p_23560 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain TSH58p_23565 PF01039 Carboxyl transferase domain TSH58p_23570 PF09856 Predicted transcriptional regulator (DUF2083) TSH58p_23570 PF06114 IrrE N-terminal-like domain TSH58p_23570 PF01381 Helix-turn-helix TSH58p_23575 PF01177 Asp/Glu/Hydantoin racemase TSH58p_23585 PF01614 Bacterial transcriptional regulator TSH58p_23585 PF09339 IclR helix-turn-helix domain TSH58p_23590 PF00171 Aldehyde dehydrogenase family TSH58p_23600 PF02515 CoA-transferase family III TSH58p_23605 PF03358 NADPH-dependent FMN reductase TSH58p_23605 PF00890 FAD binding domain TSH58p_23605 PF04205 FMN-binding domain TSH58p_23615 PF00005 ABC transporter TSH58p_23615 PF12399 Branched-chain amino acid ATP-binding cassette transporter TSH58p_23620 PF00005 ABC transporter TSH58p_23625 PF02653 Branched-chain amino acid transport system / permease component TSH58p_23635 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain TSH58p_23635 PF00672 HAMP domain TSH58p_23635 PF02203 Tar ligand binding domain homologue TSH58p_23640 PF00072 Response regulator receiver domain TSH58p_23640 PF00486 Transcriptional regulatory protein, C terminal TSH58p_23645 PF00072 Response regulator receiver domain TSH58p_23645 PF00486 Transcriptional regulatory protein, C terminal TSH58p_23650 PF00360 Phytochrome region TSH58p_23650 PF08446 PAS fold TSH58p_23650 PF01590 GAF domain TSH58p_23650 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase TSH58p_23650 PF00512 His Kinase A (phospho-acceptor) domain TSH58p_23660 PF01638 HxlR-like helix-turn-helix TSH58p_23685 PF05199 GMC oxidoreductase TSH58p_23685 PF00732 GMC oxidoreductase TSH58p_23695 PF01047 MarR family TSH58p_23720 PF18417 L-lysine epsilon oxidase C-terminal domain TSH58p_23720 PF17990 L-Lysine epsilon oxidase N-terminal TSH58p_23725 PF01494 FAD binding domain TSH58p_23750 PF01548 Transposase TSH58p_23750 PF02371 Transposase IS116/IS110/IS902 family TSH58p_23755 PF00665 Integrase core domain TSH58p_23780 PF05717 IS66 Orf2 like protein TSH58p_23800 PF13533 Biotin-lipoyl like TSH58p_23805 PF02627 Carboxymuconolactone decarboxylase family TSH58p_23815 PF00211 Adenylate and Guanylate cyclase catalytic domain TSH58p_23840 PF13358 DDE superfamily endonuclease TSH58p_23845 PF01479 S4 domain TSH58p_23845 PF01728 FtsJ-like methyltransferase TSH58p_23855 PF13292 1-deoxy-D-xylulose-5-phosphate synthase TSH58p_23855 PF02779 Transketolase, pyrimidine binding domain TSH58p_23855 PF02780 Transketolase, C-terminal domain TSH58p_23860 PF00348 Polyprenyl synthetase TSH58p_23865 PF02609 Exonuclease VII small subunit TSH58p_23870 PF00850 Histone deacetylase domain TSH58p_23875 PF01206 Sulfurtransferase TusA TSH58p_23885 PF01022 Bacterial regulatory protein, arsR family TSH58p_23895 PF01627 Hpt domain TSH58p_23895 PF00072 Response regulator receiver domain TSH58p_23895 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) TSH58p_23895 PF00512 His Kinase A (phospho-acceptor) domain TSH58p_23895 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase TSH58p_23895 PF00672 HAMP domain TSH58p_23905 PF00032 Cytochrome b(C-terminal)/b6/petD TSH58p_23905 PF00033 Cytochrome b/b6/petB TSH58p_23905 PF02167 Cytochrome C1 family TSH58p_23910 PF00033 Cytochrome b/b6/petB TSH58p_23910 PF00032 Cytochrome b(C-terminal)/b6/petD TSH58p_23915 PF10399 Ubiquitinol-cytochrome C reductase Fe-S subunit TAT signal TSH58p_23915 PF00355 Rieske [2Fe-2S] domain TSH58p_23920 PF00588 SpoU rRNA Methylase family TSH58p_23925 PF01218 Coproporphyrinogen III oxidase TSH58p_23930 PF13735 tRNA nucleotidyltransferase domain 2 putative TSH58p_23930 PF01743 Poly A polymerase head domain TSH58p_23930 PF12627 Probable RNA and SrmB- binding site of polymerase A TSH58p_23940 PF00293 NUDIX domain TSH58p_23950 PF17863 AAA lid domain TSH58p_23950 PF07726 ATPase family associated with various cellular activities (AAA) TSH58p_23975 PF01609 Transposase DDE domain TSH58p_23980 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain TSH58p_23980 PF00672 HAMP domain TSH58p_23980 PF12729 Four helix bundle sensory module for signal transduction TSH58p_23985 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily TSH58p_23995 PF00106 short chain dehydrogenase TSH58p_24000 PF00501 AMP-binding enzyme TSH58p_24000 PF13193 AMP-binding enzyme C-terminal domain TSH58p_24010 PF02653 Branched-chain amino acid transport system / permease component TSH58p_24020 PF00005 ABC transporter TSH58p_24025 PF12399 Branched-chain amino acid ATP-binding cassette transporter TSH58p_24025 PF00005 ABC transporter TSH58p_24030 PF02492 CobW/HypB/UreG, nucleotide-binding domain TSH58p_24030 PF07683 Cobalamin synthesis protein cobW C-terminal domain TSH58p_24035 PF02514 CobN/Magnesium Chelatase TSH58p_24040 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain TSH58p_24045 PF02570 Precorrin-8X methylmutase TSH58p_24050 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases TSH58p_24055 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases TSH58p_24060 PF02571 Precorrin-6x reductase CbiJ/CobK TSH58p_24065 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases TSH58p_24075 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases TSH58p_24080 PF01888 CbiD TSH58p_24085 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases TSH58p_24090 PF07685 CobB/CobQ-like glutamine amidotransferase domain TSH58p_24090 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain TSH58p_24095 PF00881 Nitroreductase family TSH58p_24105 PF00440 Bacterial regulatory proteins, tetR family TSH58p_24110 PF02627 Carboxymuconolactone decarboxylase family TSH58p_24115 PF00155 Aminotransferase class I and II TSH58p_24115 PF00392 Bacterial regulatory proteins, gntR family TSH58p_24120 PF02872 5'-nucleotidase, C-terminal domain TSH58p_24120 PF00149 Calcineurin-like phosphoesterase TSH58p_24125 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase TSH58p_24125 PF00512 His Kinase A (phospho-acceptor) domain TSH58p_24145 PF06429 Flagellar basal body rod FlgEFG protein C-terminal TSH58p_24145 PF00460 Flagella basal body rod protein TSH58p_24145 PF06429 Flagellar basal body rod FlgEFG protein C-terminal TSH58p_24145 PF07559 Flagellar basal body protein FlaE TSH58p_24145 PF00460 Flagella basal body rod protein TSH58p_24145 PF07559 Flagellar basal body protein FlaE TSH58p_24170 PF03739 Lipopolysaccharide export system permease LptF/LptG TSH58p_24175 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain TSH58p_24175 PF00672 HAMP domain TSH58p_24180 PF00005 ABC transporter TSH58p_24190 PF02653 Branched-chain amino acid transport system / permease component TSH58p_24240 PF00232 Glycosyl hydrolase family 1 TSH58p_24250 PF01923 Cobalamin adenosyltransferase TSH58p_24255 PF01012 Electron transfer flavoprotein domain TSH58p_24260 PF01012 Electron transfer flavoprotein domain TSH58p_24260 PF00766 Electron transfer flavoprotein FAD-binding domain TSH58p_24265 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain TSH58p_24265 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain TSH58p_24275 PF12146 Serine aminopeptidase, S33 TSH58p_24280 PF08534 Redoxin TSH58p_24285 PF00206 Lyase TSH58p_24285 PF14698 Argininosuccinate lyase C-terminal TSH58p_24295 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain TSH58p_24295 PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain TSH58p_24320 PF01098 Cell cycle protein TSH58p_24325 PF00512 His Kinase A (phospho-acceptor) domain TSH58p_24325 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase TSH58p_24325 PF13188 PAS domain TSH58p_24325 PF00072 Response regulator receiver domain TSH58p_24325 PF08448 PAS fold TSH58p_24330 PF00072 Response regulator receiver domain TSH58p_24330 PF00486 Transcriptional regulatory protein, C terminal TSH58p_24350 PF03471 Transporter associated domain TSH58p_24350 PF00571 CBS domain TSH58p_24350 PF01595 Cyclin M transmembrane N-terminal domain TSH58p_24360 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase TSH58p_24360 PF02702 Osmosensitive K+ channel His kinase sensor domain TSH58p_24360 PF13492 GAF domain TSH58p_24360 PF13493 Domain of unknown function (DUF4118) TSH58p_24360 PF00512 His Kinase A (phospho-acceptor) domain TSH58p_24370 PF00072 Response regulator receiver domain TSH58p_24395 PF13243 Squalene-hopene cyclase C-terminal domain TSH58p_24395 PF13249 Squalene-hopene cyclase N-terminal domain TSH58p_24420 PF01370 NAD dependent epimerase/dehydratase family TSH58p_24430 PF00376 MerR family regulatory protein TSH58p_24430 PF09278 MerR, DNA binding TSH58p_24455 PF02678 Pirin TSH58p_24455 PF17954 Quercetinase C-terminal cupin domain TSH58p_24460 PF03458 UPF0126 domain TSH58p_24470 PF02627 Carboxymuconolactone decarboxylase family TSH58p_24475 PF13411 MerR HTH family regulatory protein TSH58p_24480 PF00005 ABC transporter TSH58p_24485 PF01925 Sulfite exporter TauE/SafE TSH58p_24490 PF00501 AMP-binding enzyme TSH58p_24490 PF13193 AMP-binding enzyme C-terminal domain TSH58p_24495 PF05433 Glycine zipper 2TM domain TSH58p_24495 PF16998 17 kDa outer membrane surface antigen TSH58p_24525 PF07869 Protein of unknown function (DUF1656) TSH58p_24530 PF04632 Fusaric acid resistance protein family TSH58p_24535 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion TSH58p_24535 PF00529 HlyD membrane-fusion protein of T1SS TSH58p_24545 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family TSH58p_24545 PF03466 LysR substrate binding domain TSH58p_24550 PF07690 Major Facilitator Superfamily TSH58p_24555 PF00248 Aldo/keto reductase family TSH58p_24560 PF02080 TrkA-C domain TSH58p_24560 PF03600 Citrate transporter TSH58p_24590 PF02515 CoA-transferase family III TSH58p_24595 PF00441 Acyl-CoA dehydrogenase, C-terminal domain TSH58p_24595 PF02770 Acyl-CoA dehydrogenase, middle domain TSH58p_24595 PF02771 Acyl-CoA dehydrogenase, N-terminal domain TSH58p_24600 PF03466 LysR substrate binding domain TSH58p_24600 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family TSH58p_24605 PF00005 ABC transporter TSH58p_24605 PF08402 TOBE domain TSH58p_24610 PF13416 Bacterial extracellular solute-binding protein TSH58p_24615 PF00528 Binding-protein-dependent transport system inner membrane component TSH58p_24620 PF00528 Binding-protein-dependent transport system inner membrane component TSH58p_24625 PF07883 Cupin domain TSH58p_24625 PF01381 Helix-turn-helix TSH58p_24630 PF00171 Aldehyde dehydrogenase family TSH58p_24635 PF00202 Aminotransferase class-III TSH58p_24645 PF07237 Protein of unknown function (DUF1428) TSH58p_24660 PF00440 Bacterial regulatory proteins, tetR family TSH58p_24685 PF00202 Aminotransferase class-III TSH58p_24690 PF00491 Arginase family TSH58p_24695 PF01037 Lrp/AsnC ligand binding domain TSH58p_24695 PF13404 AsnC-type helix-turn-helix domain TSH58p_24700 PF13614 AAA domain TSH58p_24730 PF03884 DNA gyrase inhibitor YacG TSH58p_24735 PF10150 Ribonuclease E/G family TSH58p_24735 PF00575 S1 RNA binding domain TSH58p_24740 PF02545 Maf-like protein TSH58p_24745 PF01176 Translation initiation factor 1A / IF-1 TSH58p_24755 PF17149 Periplasmic sensor domain found in signal transduction proteins TSH58p_24755 PF00672 HAMP domain TSH58p_24755 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase TSH58p_24755 PF00072 Response regulator receiver domain TSH58p_24755 PF01627 Hpt domain TSH58p_24755 PF00512 His Kinase A (phospho-acceptor) domain TSH58p_24760 PF01451 Low molecular weight phosphotyrosine protein phosphatase TSH58p_24765 PF06793 Uncharacterised protein family (UPF0262) TSH58p_24770 PF00815 Histidinol dehydrogenase TSH58p_24775 PF01634 ATP phosphoribosyltransferase TSH58p_24780 PF05433 Glycine zipper 2TM domain TSH58p_24780 PF16998 17 kDa outer membrane surface antigen TSH58p_24790 PF08448 PAS fold TSH58p_24790 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase TSH58p_24790 PF00512 His Kinase A (phospho-acceptor) domain TSH58p_24790 PF00672 HAMP domain TSH58p_24790 PF16767 Sensor domain of alginate biosynthesis sensor protein KinB TSH58p_24795 PF00128 Alpha amylase, catalytic domain TSH58p_24795 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) TSH58p_24815 PF00300 Histidine phosphatase superfamily (branch 1) TSH58p_24820 PF00270 DEAD/DEAH box helicase TSH58p_24820 PF00271 Helicase conserved C-terminal domain TSH58p_24820 PF17191 RecG wedge domain TSH58p_24830 PF03808 Glycosyl transferase WecB/TagA/CpsF family TSH58p_24835 PF13614 AAA domain TSH58p_24835 PF02706 Chain length determinant protein TSH58p_24835 PF13807 G-rich domain on putative tyrosine kinase TSH58p_24840 PF00331 Glycosyl hydrolase family 10 TSH58p_24850 PF00150 Cellulase (glycosyl hydrolase family 5) TSH58p_24850 PF00553 Cellulose binding domain TSH58p_24865 PF02397 Bacterial sugar transferase TSH58p_24875 PF00535 Glycosyl transferase family 2 TSH58p_24880 PF13439 Glycosyltransferase Family 4 TSH58p_24880 PF00534 Glycosyl transferases group 1 TSH58p_24885 PF00862 Sucrose synthase TSH58p_24885 PF00534 Glycosyl transferases group 1 TSH58p_24905 PF00501 AMP-binding enzyme TSH58p_24905 PF13193 AMP-binding enzyme C-terminal domain TSH58p_24910 PF00733 Asparagine synthase TSH58p_24910 PF13537 Glutamine amidotransferase domain TSH58p_24915 PF02540 NAD synthase TSH58p_24940 PF00072 Response regulator receiver domain TSH58p_24940 PF00486 Transcriptional regulatory protein, C terminal TSH58p_24945 PF02080 TrkA-C domain TSH58p_24945 PF02254 TrkA-N domain TSH58p_24945 PF00999 Sodium/hydrogen exchanger family TSH58p_24960 PF00005 ABC transporter TSH58p_24960 PF12857 TOBE-like domain TSH58p_24965 PF00528 Binding-protein-dependent transport system inner membrane component TSH58p_24970 PF00528 Binding-protein-dependent transport system inner membrane component TSH58p_24985 PF02082 Transcriptional regulator TSH58p_24990 PF00753 Metallo-beta-lactamase superfamily TSH58p_25015 PF13545 Crp-like helix-turn-helix domain TSH58p_25015 PF00027 Cyclic nucleotide-binding domain TSH58p_25040 PF03167 Uracil DNA glycosylase superfamily TSH58p_25045 PF01464 Transglycosylase SLT domain TSH58p_25050 PF00994 Probable molybdopterin binding domain TSH58p_25065 PF04055 Radical SAM superfamily TSH58p_25080 PF00535 Glycosyl transferase family 2 TSH58p_25085 PF13439 Glycosyltransferase Family 4 TSH58p_25085 PF00534 Glycosyl transferases group 1 TSH58p_25125 PF02770 Acyl-CoA dehydrogenase, middle domain TSH58p_25125 PF02771 Acyl-CoA dehydrogenase, N-terminal domain TSH58p_25125 PF00441 Acyl-CoA dehydrogenase, C-terminal domain TSH58p_25130 PF03328 HpcH/HpaI aldolase/citrate lyase family TSH58p_25140 PF02515 CoA-transferase family III TSH58p_25145 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family TSH58p_25145 PF03466 LysR substrate binding domain TSH58p_25150 PF00111 2Fe-2S iron-sulfur cluster binding domain TSH58p_25150 PF01799 [2Fe-2S] binding domain TSH58p_25155 PF03450 CO dehydrogenase flavoprotein C-terminal domain TSH58p_25155 PF00941 FAD binding domain in molybdopterin dehydrogenase TSH58p_25160 PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase TSH58p_25160 PF01315 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain TSH58p_25170 PF03707 Bacterial signalling protein N terminal repeat TSH58p_25170 PF00563 EAL domain TSH58p_25170 PF00990 Diguanylate cyclase, GGDEF domain TSH58p_25180 PF04102 SlyX TSH58p_25190 PF01475 Ferric uptake regulator family TSH58p_25210 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain TSH58p_25210 PF00672 HAMP domain TSH58p_25215 PF01679 Proteolipid membrane potential modulator TSH58p_25225 PF16998 17 kDa outer membrane surface antigen TSH58p_25225 PF05433 Glycine zipper 2TM domain TSH58p_25285 PF00872 Transposase, Mutator family TSH58p_25320 PF08494 DEAD/H associated TSH58p_25320 PF00270 DEAD/DEAH box helicase TSH58p_25320 PF00271 Helicase conserved C-terminal domain TSH58p_25370 PF00083 Sugar (and other) transporter TSH58p_25375 PF01842 ACT domain TSH58p_25375 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain TSH58p_25375 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain TSH58p_25380 PF00107 Zinc-binding dehydrogenase TSH58p_25380 PF08240 Alcohol dehydrogenase GroES-like domain TSH58p_25385 PF13378 Enolase C-terminal domain-like TSH58p_25385 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain TSH58p_25390 PF00106 short chain dehydrogenase TSH58p_25405 PF00753 Metallo-beta-lactamase superfamily TSH58p_25410 PF03466 LysR substrate binding domain TSH58p_25410 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family TSH58p_25500 PF00149 Calcineurin-like phosphoesterase TSH58p_25500 PF12320 Type 5 capsule protein repressor C-terminal domain TSH58p_25510 PF13180 PDZ domain TSH58p_25510 PF17820 PDZ domain TSH58p_25520 PF13614 AAA domain TSH58p_25525 PF17762 HTH domain found in ParB protein TSH58p_25525 PF02195 ParB-like nuclease domain TSH58p_25530 PF03167 Uracil DNA glycosylase superfamily TSH58p_25540 PF08376 Nitrate and nitrite sensing TSH58p_25540 PF03861 ANTAR domain TSH58p_25545 PF00005 ABC transporter TSH58p_25550 PF00528 Binding-protein-dependent transport system inner membrane component TSH58p_25560 PF04324 BFD-like [2Fe-2S] binding domain TSH58p_25560 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain TSH58p_25560 PF07992 Pyridine nucleotide-disulphide oxidoreductase TSH58p_25560 PF01077 Nitrite and sulphite reductase 4Fe-4S domain TSH58p_25560 PF18267 Rubredoxin NAD+ reductase C-terminal domain TSH58p_25565 PF00355 Rieske [2Fe-2S] domain TSH58p_25570 PF00384 Molybdopterin oxidoreductase TSH58p_25570 PF01568 Molydopterin dinucleotide binding domain TSH58p_25570 PF04879 Molybdopterin oxidoreductase Fe4S4 domain TSH58p_25570 PF04324 BFD-like [2Fe-2S] binding domain TSH58p_25575 PF14824 Sirohaem biosynthesis protein central TSH58p_25575 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases TSH58p_25575 PF10414 Sirohaem synthase dimerisation region TSH58p_25580 PF18348 Bacterial dipeptidyl-peptidase Sh3 domain TSH58p_25580 PF00877 NlpC/P60 family TSH58p_25590 PF08497 Radical SAM N-terminal TSH58p_25590 PF11842 Domain of unknown function (DUF3362) TSH58p_25590 PF04055 Radical SAM superfamily TSH58p_25635 PF01541 GIY-YIG catalytic domain TSH58p_25635 PF02151 UvrB/uvrC motif TSH58p_25635 PF08459 UvrC Helix-hairpin-helix N-terminal TSH58p_25635 PF12826 Helix-hairpin-helix motif TSH58p_25640 PF00356 Bacterial regulatory proteins, lacI family TSH58p_25640 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family TSH58p_25645 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family TSH58p_25645 PF03466 LysR substrate binding domain TSH58p_25655 PF00576 HIUase/Transthyretin family TSH58p_25660 PF01014 Uricase TSH58p_25660 PF09349 OHCU decarboxylase TSH58p_25665 PF07687 Peptidase dimerisation domain TSH58p_25665 PF01546 Peptidase family M20/M25/M40 TSH58p_25670 PF01546 Peptidase family M20/M25/M40 TSH58p_25670 PF07687 Peptidase dimerisation domain TSH58p_25675 PF00478 IMP dehydrogenase / GMP reductase domain TSH58p_25680 PF03275 UDP-galactopyranose mutase TSH58p_25690 PF02749 Quinolinate phosphoribosyl transferase, N-terminal domain TSH58p_25690 PF01729 Quinolinate phosphoribosyl transferase, C-terminal domain TSH58p_25695 PF00890 FAD binding domain TSH58p_25695 PF02910 Fumarate reductase flavoprotein C-term TSH58p_25700 PF02445 Quinolinate synthetase A protein TSH58p_25735 PF01568 Molydopterin dinucleotide binding domain TSH58p_25735 PF00384 Molybdopterin oxidoreductase TSH58p_25735 PF04879 Molybdopterin oxidoreductase Fe4S4 domain TSH58p_25740 PF13247 4Fe-4S dicluster domain TSH58p_25745 PF01292 Prokaryotic cytochrome b561 TSH58p_25750 PF01546 Peptidase family M20/M25/M40 TSH58p_25750 PF07687 Peptidase dimerisation domain TSH58p_25770 PF00005 ABC transporter TSH58p_25775 PF00528 Binding-protein-dependent transport system inner membrane component TSH58p_25800 PF00072 Response regulator receiver domain TSH58p_25800 PF00486 Transcriptional regulatory protein, C terminal TSH58p_25805 PF00512 His Kinase A (phospho-acceptor) domain TSH58p_25805 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase TSH58p_25805 PF00672 HAMP domain TSH58p_25810 PF02417 Chromate transporter TSH58p_25815 PF13417 Glutathione S-transferase, N-terminal domain TSH58p_25815 PF00043 Glutathione S-transferase, C-terminal domain TSH58p_25820 PF00583 Acetyltransferase (GNAT) family TSH58p_25825 PF04898 Glutamate synthase central domain TSH58p_25825 PF00310 Glutamine amidotransferases class-II TSH58p_25825 PF01493 GXGXG motif TSH58p_25825 PF01645 Conserved region in glutamate synthase TSH58p_25830 PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster TSH58p_25830 PF07992 Pyridine nucleotide-disulphide oxidoreductase TSH58p_25835 PF02673 Bacitracin resistance protein BacA TSH58p_25840 PF07690 Major Facilitator Superfamily TSH58p_25845 PF04321 RmlD substrate binding domain TSH58p_25855 PF01612 3'-5' exonuclease TSH58p_25855 PF00570 HRDC domain TSH58p_25860 PF00571 CBS domain TSH58p_25860 PF01380 SIS domain TSH58p_25875 PF00005 ABC transporter TSH58p_25880 PF00309 Sigma-54 factor, Activator interacting domain (AID) TSH58p_25880 PF04963 Sigma-54 factor, core binding domain TSH58p_25880 PF04552 Sigma-54, DNA binding domain TSH58p_25885 PF16321 Sigma 54 modulation/S30EA ribosomal protein C terminus TSH58p_25885 PF02482 Sigma 54 modulation protein / S30EA ribosomal protein TSH58p_25890 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 TSH58p_25900 PF01842 ACT domain TSH58p_25900 PF13840 ACT domain TSH58p_25900 PF00696 Amino acid kinase family TSH58p_25910 PF02896 PEP-utilising enzyme, TIM barrel domain TSH58p_25910 PF01590 GAF domain TSH58p_25910 PF00391 PEP-utilising enzyme, mobile domain TSH58p_25910 PF05524 PEP-utilising enzyme, N-terminal TSH58p_25920 PF04551 GcpE protein TSH58p_25925 PF01488 Shikimate / quinate 5-dehydrogenase TSH58p_25925 PF05201 Glutamyl-tRNAGlu reductase, N-terminal domain TSH58p_25925 PF00745 Glutamyl-tRNAGlu reductase, dimerisation domain TSH58p_25930 PF03462 PCRF domain TSH58p_25930 PF00472 RF-1 domain TSH58p_25935 PF04480 Protein of unknown function (DUF559) TSH58p_25940 PF17827 PrmC N-terminal domain TSH58p_25940 PF13847 Methyltransferase domain TSH58p_25955 PF13344 Haloacid dehalogenase-like hydrolase TSH58p_25955 PF00293 NUDIX domain TSH58p_25960 PF00004 ATPase family associated with various cellular activities (AAA) TSH58p_25960 PF10431 C-terminal, D2-small domain, of ClpB protein TSH58p_25960 PF07724 AAA domain (Cdc48 subfamily) TSH58p_25960 PF17871 AAA lid domain TSH58p_25960 PF02861 Clp amino terminal domain, pathogenicity island component TSH58p_25965 PF03006 Haemolysin-III related TSH58p_25975 PF03591 AzlC protein TSH58p_25990 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain TSH58p_25990 PF02203 Tar ligand binding domain homologue TSH58p_25990 PF00672 HAMP domain TSH58p_25995 PF00664 ABC transporter transmembrane region TSH58p_25995 PF00005 ABC transporter TSH58p_26015 PF00830 Ribosomal L28 family TSH58p_26025 PF02631 RecX family TSH58p_26030 PF01061 ABC-2 type transporter TSH58p_26035 PF00202 Aminotransferase class-III TSH58p_26040 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain TSH58p_26040 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain TSH58p_26045 PF01430 Hsp33 protein TSH58p_26055 PF00670 S-adenosyl-L-homocysteine hydrolase, NAD binding domain TSH58p_26055 PF05221 S-adenosyl-L-homocysteine hydrolase TSH58p_26060 PF01569 PAP2 superfamily TSH58p_26075 PF02885 Glycosyl transferase family, helical bundle domain TSH58p_26075 PF00591 Glycosyl transferase family, a/b domain TSH58p_26080 PF00593 TonB dependent receptor TSH58p_26080 PF07715 TonB-dependent Receptor Plug Domain TSH58p_26085 PF18331 PKHD-type hydroxylase C-terminal domain TSH58p_26085 PF13640 2OG-Fe(II) oxygenase superfamily TSH58p_26095 PF01070 FMN-dependent dehydrogenase TSH58p_26100 PF00005 ABC transporter TSH58p_26105 PF01032 FecCD transport family TSH58p_26110 PF01032 FecCD transport family TSH58p_26115 PF01497 Periplasmic binding protein TSH58p_26120 PF03551 Transcriptional regulator PadR-like family TSH58p_26135 PF01627 Hpt domain TSH58p_26135 PF00072 Response regulator receiver domain TSH58p_26135 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) TSH58p_26135 PF00672 HAMP domain TSH58p_26135 PF00512 His Kinase A (phospho-acceptor) domain TSH58p_26135 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase TSH58p_26140 PF00072 Response regulator receiver domain TSH58p_26160 PF00005 ABC transporter TSH58p_26220 PF00005 ABC transporter TSH58p_26225 PF01032 FecCD transport family TSH58p_26235 PF07715 TonB-dependent Receptor Plug Domain TSH58p_26235 PF00593 TonB dependent receptor TSH58p_26245 PF03741 Integral membrane protein TerC family TSH58p_26265 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family TSH58p_26265 PF03466 LysR substrate binding domain TSH58p_26270 PF02896 PEP-utilising enzyme, TIM barrel domain TSH58p_26270 PF00391 PEP-utilising enzyme, mobile domain TSH58p_26270 PF05524 PEP-utilising enzyme, N-terminal TSH58p_26275 PF00381 PTS HPr component phosphorylation site TSH58p_26280 PF03830 PTS system sorbose subfamily IIB component TSH58p_26280 PF03610 PTS system fructose IIA component TSH58p_26285 PF03668 P-loop ATPase protein family TSH58p_26290 PF07475 HPr Serine kinase C-terminal domain TSH58p_26290 PF02603 HPr Serine kinase N terminus TSH58p_26300 PF13756 Stimulus-sensing domain TSH58p_26300 PF00512 His Kinase A (phospho-acceptor) domain TSH58p_26300 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase TSH58p_26300 PF13755 Sensor N-terminal transmembrane domain TSH58p_26300 PF00672 HAMP domain TSH58p_26305 PF00072 Response regulator receiver domain TSH58p_26305 PF00486 Transcriptional regulatory protein, C terminal TSH58p_26320 PF00821 Phosphoenolpyruvate carboxykinase C-terminal P-loop domain TSH58p_26320 PF17297 Phosphoenolpyruvate carboxykinase N-terminal domain TSH58p_26325 PF01618 MotA/TolQ/ExbB proton channel family TSH58p_26335 PF01476 LysM domain TSH58p_26335 PF01551 Peptidase family M23 TSH58p_26335 PF08525 Opacity-associated protein A N-terminal motif TSH58p_26375 PF01361 Tautomerase enzyme TSH58p_26380 PF00596 Class II Aldolase and Adducin N-terminal domain TSH58p_26385 PF02954 Bacterial regulatory protein, Fis family TSH58p_26385 PF00072 Response regulator receiver domain TSH58p_26385 PF00158 Sigma-54 interaction domain TSH58p_26390 PF08448 PAS fold TSH58p_26390 PF13188 PAS domain TSH58p_26390 PF00072 Response regulator receiver domain TSH58p_26390 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase TSH58p_26390 PF00512 His Kinase A (phospho-acceptor) domain TSH58p_26395 PF04216 Protein involved in formate dehydrogenase formation TSH58p_26400 PF01568 Molydopterin dinucleotide binding domain TSH58p_26400 PF00384 Molybdopterin oxidoreductase TSH58p_26400 PF04879 Molybdopterin oxidoreductase Fe4S4 domain TSH58p_26405 PF09163 Formate dehydrogenase N, transmembrane TSH58p_26405 PF13247 4Fe-4S dicluster domain TSH58p_26410 PF01292 Prokaryotic cytochrome b561 TSH58p_26415 PF02634 FdhD/NarQ family TSH58p_26425 PF00512 His Kinase A (phospho-acceptor) domain TSH58p_26425 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase TSH58p_26430 PF00486 Transcriptional regulatory protein, C terminal TSH58p_26430 PF00072 Response regulator receiver domain TSH58p_26435 PF00072 Response regulator receiver domain TSH58p_26435 PF01339 CheB methylesterase TSH58p_26440 PF00072 Response regulator receiver domain TSH58p_26440 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase TSH58p_26440 PF01627 Hpt domain TSH58p_26440 PF01584 CheW-like domain TSH58p_26445 PF02203 Tar ligand binding domain homologue TSH58p_26445 PF00672 HAMP domain TSH58p_26445 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain TSH58p_26455 PF03705 CheR methyltransferase, all-alpha domain TSH58p_26455 PF01739 CheR methyltransferase, SAM binding domain TSH58p_26465 PF02261 Aspartate decarboxylase TSH58p_26485 PF08241 Methyltransferase domain TSH58p_26485 PF12697 Alpha/beta hydrolase family TSH58p_26490 PF03975 CheD chemotactic sensory transduction TSH58p_26495 PF02113 D-Ala-D-Ala carboxypeptidase 3 (S13) family TSH58p_26505 PF01648 4'-phosphopantetheinyl transferase superfamily TSH58p_26510 PF01259 SAICAR synthetase TSH58p_26515 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain TSH58p_26515 PF01842 ACT domain TSH58p_26515 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain TSH58p_26520 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 TSH58p_26525 PF04039 Domain related to MnhB subunit of Na+/H+ antiporter TSH58p_26525 PF13244 Domain of unknown function (DUF4040) TSH58p_26525 PF00361 Proton-conducting membrane transporter TSH58p_26525 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus TSH58p_26530 PF00420 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L TSH58p_26535 PF00361 Proton-conducting membrane transporter TSH58p_26540 PF01899 Na+/H+ ion antiporter subunit TSH58p_26545 PF04066 Multiple resistance and pH regulation protein F (MrpF / PhaF) TSH58p_26550 PF03334 Na+/H+ antiporter subunit TSH58p_26575 PF16363 GDP-mannose 4,6 dehydratase TSH58p_26580 PF00005 ABC transporter TSH58p_26580 PF00664 ABC transporter transmembrane region TSH58p_26590 PF00005 ABC transporter TSH58p_26625 PF13458 Periplasmic binding protein TSH58p_26630 PF00529 HlyD membrane-fusion protein of T1SS TSH58p_26635 PF00664 ABC transporter transmembrane region TSH58p_26635 PF03412 Peptidase C39 family TSH58p_26635 PF00005 ABC transporter TSH58p_26650 PF00005 ABC transporter TSH58p_26650 PF17912 MalK OB fold domain TSH58p_26655 PF00528 Binding-protein-dependent transport system inner membrane component TSH58p_26660 PF00528 Binding-protein-dependent transport system inner membrane component TSH58p_26670 PF00171 Aldehyde dehydrogenase family TSH58p_26680 PF00378 Enoyl-CoA hydratase/isomerase TSH58p_26690 PF02515 CoA-transferase family III TSH58p_26695 PF00106 short chain dehydrogenase TSH58p_26700 PF00356 Bacterial regulatory proteins, lacI family TSH58p_26730 PF02554 Carbon starvation protein CstA TSH58p_26730 PF13722 5TM C-terminal transporter carbon starvation CstA TSH58p_26735 PF04328 Selenoprotein, putative TSH58p_26745 PF00107 Zinc-binding dehydrogenase TSH58p_26745 PF08240 Alcohol dehydrogenase GroES-like domain TSH58p_26745 PF13823 Alcohol dehydrogenase GroES-associated TSH58p_26750 PF00106 short chain dehydrogenase TSH58p_26760 PF07729 FCD domain TSH58p_26760 PF00392 Bacterial regulatory proteins, gntR family TSH58p_26770 PF00528 Binding-protein-dependent transport system inner membrane component TSH58p_26780 PF00005 ABC transporter TSH58p_26805 PF00795 Carbon-nitrogen hydrolase TSH58p_26805 PF02540 NAD synthase TSH58p_26810 PF00672 HAMP domain TSH58p_26810 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain TSH58p_26815 PF02423 Ornithine cyclodeaminase/mu-crystallin family TSH58p_26820 PF00135 Carboxylesterase family TSH58p_26825 PF00005 ABC transporter TSH58p_26835 PF00528 Binding-protein-dependent transport system inner membrane component TSH58p_26855 PF07690 Major Facilitator Superfamily TSH58p_26860 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family TSH58p_26860 PF03466 LysR substrate binding domain TSH58p_26865 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle TSH58p_26870 PF00528 Binding-protein-dependent transport system inner membrane component TSH58p_26885 PF00701 Dihydrodipicolinate synthetase family TSH58p_26890 PF00528 Binding-protein-dependent transport system inner membrane component TSH58p_26895 PF08402 TOBE domain TSH58p_26895 PF00005 ABC transporter TSH58p_26905 PF01565 FAD binding domain TSH58p_26905 PF02913 FAD linked oxidases, C-terminal domain TSH58p_26910 PF04055 Radical SAM superfamily TSH58p_26910 PF00919 Uncharacterized protein family UPF0004 TSH58p_26920 PF05974 Domain of unknown function (DUF892) TSH58p_26950 PF00474 Sodium:solute symporter family TSH58p_26955 PF03480 Bacterial extracellular solute-binding protein, family 7 TSH58p_26965 PF00583 Acetyltransferase (GNAT) family TSH58p_26970 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase TSH58p_26970 PF01751 Toprim domain TSH58p_26970 PF00204 DNA gyrase B TSH58p_26970 PF00986 DNA gyrase B subunit, carboxyl terminus TSH58p_26975 PF02463 RecF/RecN/SMC N terminal domain TSH58p_26980 PF02768 DNA polymerase III beta subunit, C-terminal domain TSH58p_26980 PF02767 DNA polymerase III beta subunit, central domain TSH58p_26980 PF00712 DNA polymerase III beta subunit, N-terminal domain TSH58p_27000 PF02421 Ferrous iron transport protein B TSH58p_27000 PF07670 Nucleoside recognition TSH58p_27000 PF07664 Ferrous iron transport protein B C terminus TSH58p_27010 PF00563 EAL domain TSH58p_27010 PF03707 Bacterial signalling protein N terminal repeat TSH58p_27010 PF00990 Diguanylate cyclase, GGDEF domain TSH58p_27015 PF01979 Amidohydrolase family TSH58p_27015 PF13382 Adenine deaminase C-terminal domain TSH58p_27025 PF00561 alpha/beta hydrolase fold TSH58p_27030 PF00196 Bacterial regulatory proteins, luxR family TSH58p_27030 PF00072 Response regulator receiver domain TSH58p_27035 PF00989 PAS fold TSH58p_27035 PF00512 His Kinase A (phospho-acceptor) domain TSH58p_27035 PF08447 PAS fold TSH58p_27035 PF13426 PAS domain TSH58p_27035 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase TSH58p_27035 PF13493 Domain of unknown function (DUF4118) TSH58p_27040 PF00857 Isochorismatase family TSH58p_27050 PF07969 Amidohydrolase family TSH58p_27100 PF12706 Beta-lactamase superfamily domain TSH58p_27105 PF13417 Glutathione S-transferase, N-terminal domain TSH58p_27110 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family TSH58p_27110 PF03466 LysR substrate binding domain TSH58p_27115 PF13378 Enolase C-terminal domain-like TSH58p_27125 PF00072 Response regulator receiver domain TSH58p_27125 PF01627 Hpt domain TSH58p_27125 PF00512 His Kinase A (phospho-acceptor) domain TSH58p_27125 PF17149 Periplasmic sensor domain found in signal transduction proteins TSH58p_27125 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase TSH58p_27125 PF00672 HAMP domain TSH58p_27130 PF00579 tRNA synthetases class I (W and Y) TSH58p_27135 PF08544 GHMP kinases C terminal TSH58p_27135 PF00288 GHMP kinases N terminal domain TSH58p_27145 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family TSH58p_27145 PF03466 LysR substrate binding domain TSH58p_27155 PF02690 Na+/Pi-cotransporter TSH58p_27160 PF01370 NAD dependent epimerase/dehydratase family TSH58p_27165 PF00072 Response regulator receiver domain TSH58p_27170 PF13188 PAS domain TSH58p_27170 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase TSH58p_27170 PF00512 His Kinase A (phospho-acceptor) domain TSH58p_27170 PF00072 Response regulator receiver domain TSH58p_27170 PF08448 PAS fold TSH58p_27180 PF00027 Cyclic nucleotide-binding domain TSH58p_27180 PF13545 Crp-like helix-turn-helix domain TSH58p_27190 PF02624 YcaO cyclodehydratase, ATP-ad Mg2+-binding TSH58p_27205 PF00072 Response regulator receiver domain TSH58p_27205 PF00211 Adenylate and Guanylate cyclase catalytic domain TSH58p_27215 PF01384 Phosphate transporter family TSH58p_27220 PF01865 Protein of unknown function DUF47 TSH58p_27230 PF03737 Aldolase/RraA TSH58p_27235 PF01202 Shikimate kinase TSH58p_27250 PF00258 Flavodoxin TSH58p_27255 PF07690 Major Facilitator Superfamily TSH58p_27265 PF11791 Aconitate B N-terminal domain TSH58p_27265 PF06434 Aconitate hydratase 2 N-terminus TSH58p_27265 PF00330 Aconitase family (aconitate hydratase) TSH58p_27285 PF05193 Peptidase M16 inactive domain TSH58p_27285 PF00675 Insulinase (Peptidase family M16) TSH58p_27295 PF04752 ChaC-like protein TSH58p_27310 PF01924 Hydrogenase formation hypA family TSH58p_27315 PF03480 Bacterial extracellular solute-binding protein, family 7 TSH58p_27325 PF00005 ABC transporter TSH58p_27325 PF12848 ABC transporter TSH58p_27340 PF02525 Flavodoxin-like fold TSH58p_27345 PF03466 LysR substrate binding domain TSH58p_27345 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family TSH58p_27350 PF08240 Alcohol dehydrogenase GroES-like domain TSH58p_27350 PF00107 Zinc-binding dehydrogenase TSH58p_27355 PF09335 SNARE associated Golgi protein TSH58p_27360 PF02867 Ribonucleotide reductase, barrel domain TSH58p_27360 PF03477 ATP cone domain TSH58p_27360 PF00317 Ribonucleotide reductase, all-alpha domain TSH58p_27385 PF00005 ABC transporter TSH58p_27395 PF18665 Tetracyclin repressor-like, C-terminal domain TSH58p_27395 PF00440 Bacterial regulatory proteins, tetR family TSH58p_27400 PF13533 Biotin-lipoyl like TSH58p_27405 PF07690 Major Facilitator Superfamily TSH58p_27420 PF08448 PAS fold TSH58p_27420 PF08447 PAS fold TSH58p_27420 PF00563 EAL domain TSH58p_27420 PF00990 Diguanylate cyclase, GGDEF domain TSH58p_27425 PF02565 Recombination protein O C terminal TSH58p_27425 PF11967 Recombination protein O N terminal TSH58p_27430 PF03989 DNA gyrase C-terminal domain, beta-propeller TSH58p_27430 PF00521 DNA gyrase/topoisomerase IV, subunit A TSH58p_27435 PF03480 Bacterial extracellular solute-binding protein, family 7 TSH58p_27440 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component TSH58p_27450 PF04377 Arginine-tRNA-protein transferase, C terminus TSH58p_27450 PF04376 Arginine-tRNA-protein transferase, N terminus TSH58p_27455 PF14403 Circularly permuted ATP-grasp type 2 TSH58p_27455 PF04168 A predicted alpha-helical domain with a conserved ER motif. TSH58p_27460 PF14403 Circularly permuted ATP-grasp type 2 TSH58p_27465 PF00691 OmpA family TSH58p_27465 PF13677 Membrane MotB of proton-channel complex MotA/MotB TSH58p_27470 PF01613 Flavin reductase like domain TSH58p_27475 PF00291 Pyridoxal-phosphate dependent enzyme TSH58p_27475 PF13291 ACT domain TSH58p_27480 PF01804 Penicillin amidase TSH58p_27495 PF10090 Histidine phosphotransferase C-terminal domain TSH58p_27500 PF07194 P2 response regulator binding domain TSH58p_27500 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase TSH58p_27500 PF01627 Hpt domain TSH58p_27500 PF02895 Signal transducing histidine kinase, homodimeric domain TSH58p_27500 PF01584 CheW-like domain TSH58p_27505 PF01584 CheW-like domain TSH58p_27510 PF08769 Sporulation initiation factor Spo0A C terminal TSH58p_27510 PF00072 Response regulator receiver domain TSH58p_27515 PF00072 Response regulator receiver domain TSH58p_27515 PF01339 CheB methylesterase TSH58p_27520 PF03705 CheR methyltransferase, all-alpha domain TSH58p_27520 PF01739 CheR methyltransferase, SAM binding domain TSH58p_27525 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family TSH58p_27525 PF03466 LysR substrate binding domain TSH58p_27535 PF00072 Response regulator receiver domain TSH58p_27535 PF00486 Transcriptional regulatory protein, C terminal TSH58p_27540 PF02874 ATP synthase alpha/beta family, beta-barrel domain TSH58p_27540 PF18269 T3SS EscN ATPase C-terminal domain TSH58p_27540 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain TSH58p_27550 PF13188 PAS domain TSH58p_27550 PF00990 Diguanylate cyclase, GGDEF domain TSH58p_27550 PF00563 EAL domain TSH58p_27550 PF03707 Bacterial signalling protein N terminal repeat TSH58p_27565 PF10609 NUBPL iron-transfer P-loop NTPase TSH58p_27570 PF02881 SRP54-type protein, helical bundle domain TSH58p_27570 PF00448 SRP54-type protein, GTPase domain TSH58p_27575 PF00771 FHIPEP family TSH58p_27580 PF00158 Sigma-54 interaction domain TSH58p_27580 PF02954 Bacterial regulatory protein, Fis family TSH58p_27585 PF01618 MotA/TolQ/ExbB proton channel family TSH58p_27590 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term TSH58p_27600 PF01514 Secretory protein of YscJ/FliF family TSH58p_27600 PF08345 Flagellar M-ring protein C-terminal TSH58p_27605 PF01381 Helix-turn-helix TSH58p_27620 PF17149 Periplasmic sensor domain found in signal transduction proteins TSH58p_27620 PF00672 HAMP domain TSH58p_27620 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase TSH58p_27620 PF00512 His Kinase A (phospho-acceptor) domain TSH58p_27620 PF01627 Hpt domain TSH58p_27620 PF00072 Response regulator receiver domain TSH58p_27645 PF00768 D-alanyl-D-alanine carboxypeptidase TSH58p_27645 PF07943 Penicillin-binding protein 5, C-terminal domain TSH58p_27665 PF00528 Binding-protein-dependent transport system inner membrane component TSH58p_27670 PF00005 ABC transporter TSH58p_27670 PF08402 TOBE domain TSH58p_27680 PF00999 Sodium/hydrogen exchanger family TSH58p_27685 PF04143 Sulphur transport TSH58p_27695 PF03466 LysR substrate binding domain TSH58p_27695 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family TSH58p_27700 PF00107 Zinc-binding dehydrogenase TSH58p_27700 PF08240 Alcohol dehydrogenase GroES-like domain TSH58p_27705 PF00756 Putative esterase TSH58p_27710 PF16868 NMT1-like family TSH58p_27730 PF01232 Mannitol dehydrogenase Rossmann domain TSH58p_27730 PF08125 Mannitol dehydrogenase C-terminal domain TSH58p_27735 PF04295 D-galactarate dehydratase / Altronate hydrolase, C terminus TSH58p_27735 PF08666 SAF domain TSH58p_27740 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component TSH58p_27750 PF03480 Bacterial extracellular solute-binding protein, family 7 TSH58p_27755 PF00107 Zinc-binding dehydrogenase TSH58p_27755 PF08240 Alcohol dehydrogenase GroES-like domain TSH58p_27800 PF12794 Mechanosensitive ion channel inner membrane domain 1 TSH58p_27800 PF12795 Mechanosensitive ion channel porin domain TSH58p_27800 PF00924 Mechanosensitive ion channel TSH58p_27810 PF07690 Major Facilitator Superfamily TSH58p_27815 PF00255 Glutathione peroxidase TSH58p_27825 PF01207 Dihydrouridine synthase (Dus) TSH58p_27835 PF01418 Helix-turn-helix domain, rpiR family TSH58p_27835 PF02685 Glucokinase TSH58p_27835 PF01380 SIS domain TSH58p_27840 PF04290 Tripartite ATP-independent periplasmic transporters, DctQ component TSH58p_27845 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component TSH58p_27850 PF03480 Bacterial extracellular solute-binding protein, family 7 TSH58p_27860 PF01557 Fumarylacetoacetate (FAA) hydrolase family TSH58p_27875 PF00155 Aminotransferase class I and II TSH58p_27880 PF00512 His Kinase A (phospho-acceptor) domain TSH58p_27880 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase TSH58p_27885 PF07703 Alpha-2-macroglobulin bait region domain TSH58p_27885 PF01835 MG2 domain TSH58p_27885 PF17970 Bacterial Alpha-2-macroglobulin MG1 domain TSH58p_27885 PF00207 Alpha-2-macroglobulin family TSH58p_27885 PF17973 Bacterial Alpha-2-macroglobulin MG10 domain TSH58p_27885 PF11974 Bacterial alpha-2-macroglobulin MG3 domain TSH58p_27885 PF17972 Bacterial Alpha-2-macroglobulin MG5 domain TSH58p_27885 PF17962 Bacterial macroglobulin domain 6 TSH58p_27895 PF09278 MerR, DNA binding TSH58p_27895 PF00376 MerR family regulatory protein TSH58p_27900 PF02803 Thiolase, C-terminal domain TSH58p_27900 PF00108 Thiolase, N-terminal domain TSH58p_27905 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain TSH58p_27905 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain TSH58p_27905 PF00378 Enoyl-CoA hydratase/isomerase TSH58p_27910 PF00441 Acyl-CoA dehydrogenase, C-terminal domain TSH58p_27910 PF12806 Acetyl-CoA dehydrogenase C-terminal like TSH58p_27910 PF02770 Acyl-CoA dehydrogenase, middle domain TSH58p_27910 PF02771 Acyl-CoA dehydrogenase, N-terminal domain TSH58p_27915 PF00072 Response regulator receiver domain TSH58p_27915 PF00196 Bacterial regulatory proteins, luxR family TSH58p_27925 PF03922 OmpW family TSH58p_27935 PF01266 FAD dependent oxidoreductase TSH58p_27940 PF02463 RecF/RecN/SMC N terminal domain TSH58p_27955 PF10576 Iron-sulfur binding domain of endonuclease III TSH58p_27955 PF00633 Helix-hairpin-helix motif TSH58p_27955 PF00730 HhH-GPD superfamily base excision DNA repair protein TSH58p_27955 PF14815 NUDIX domain TSH58p_27965 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase TSH58p_27965 PF00497 Bacterial extracellular solute-binding proteins, family 3 TSH58p_27965 PF00512 His Kinase A (phospho-acceptor) domain TSH58p_27975 PF01555 DNA methylase TSH58p_27975 PF18755 Restriction Enzyme Adenine Methylase Associated TSH58p_27980 PF01351 Ribonuclease HII TSH58p_27985 PF13302 Acetyltransferase (GNAT) domain TSH58p_27985 PF00027 Cyclic nucleotide-binding domain TSH58p_27990 PF02810 SEC-C motif TSH58p_27995 PF00313 'Cold-shock' DNA-binding domain TSH58p_28000 PF13180 PDZ domain TSH58p_28000 PF03572 Peptidase family S41 TSH58p_28005 PF02397 Bacterial sugar transferase TSH58p_28010 PF02769 AIR synthase related protein, C-terminal domain TSH58p_28010 PF00586 AIR synthase related protein, N-terminal domain TSH58p_28015 PF01455 HupF/HypC family TSH58p_28020 PF00708 Acylphosphatase TSH58p_28020 PF17788 HypF Kae1-like domain TSH58p_28020 PF01300 Telomere recombination TSH58p_28020 PF07503 HypF finger TSH58p_28025 PF02492 CobW/HypB/UreG, nucleotide-binding domain TSH58p_28030 PF01155 Hydrogenase/urease nickel incorporation, metallochaperone, hypA TSH58p_28035 PF00374 Nickel-dependent hydrogenase TSH58p_28045 PF01455 HupF/HypC family TSH58p_28070 PF01750 Hydrogenase maturation protease TSH58p_28075 PF00374 Nickel-dependent hydrogenase TSH58p_28080 PF03916 Polysulphide reductase, NrfD TSH58p_28085 PF13247 4Fe-4S dicluster domain TSH58p_28090 PF14720 NiFe/NiFeSe hydrogenase small subunit C-terminal TSH58p_28090 PF01058 NADH ubiquinone oxidoreductase, 20 Kd subunit TSH58p_28105 PF01979 Amidohydrolase family TSH58p_28105 PF13382 Adenine deaminase C-terminal domain TSH58p_28115 PF05050 Methyltransferase FkbM domain TSH58p_28125 PF00892 EamA-like transporter family TSH58p_28130 PF00005 ABC transporter TSH58p_28130 PF06472 ABC transporter transmembrane region 2 TSH58p_28140 PF00043 Glutathione S-transferase, C-terminal domain TSH58p_28140 PF02798 Glutathione S-transferase, N-terminal domain TSH58p_28160 PF00128 Alpha amylase, catalytic domain TSH58p_28165 PF02446 4-alpha-glucanotransferase TSH58p_28185 PF01266 FAD dependent oxidoreductase TSH58p_28195 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase TSH58p_28195 PF00512 His Kinase A (phospho-acceptor) domain TSH58p_28195 PF00672 HAMP domain TSH58p_28200 PF00072 Response regulator receiver domain TSH58p_28200 PF00486 Transcriptional regulatory protein, C terminal TSH58p_28205 PF00512 His Kinase A (phospho-acceptor) domain TSH58p_28205 PF00072 Response regulator receiver domain TSH58p_28205 PF01627 Hpt domain TSH58p_28205 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase TSH58p_28205 PF00672 HAMP domain TSH58p_28210 PF00313 'Cold-shock' DNA-binding domain TSH58p_28220 PF12802 MarR family TSH58p_28225 PF01063 Amino-transferase class IV TSH58p_28230 PF02151 UvrB/uvrC motif TSH58p_28230 PF04851 Type III restriction enzyme, res subunit TSH58p_28230 PF12344 Ultra-violet resistance protein B TSH58p_28230 PF00271 Helicase conserved C-terminal domain TSH58p_28230 PF17757 UvrB interaction domain TSH58p_28245 PF07690 Major Facilitator Superfamily TSH58p_28250 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase TSH58p_28250 PF00512 His Kinase A (phospho-acceptor) domain TSH58p_28255 PF04364 DNA polymerase III chi subunit, HolC TSH58p_28260 PF02789 Cytosol aminopeptidase family, N-terminal domain TSH58p_28260 PF00883 Cytosol aminopeptidase family, catalytic domain TSH58p_28270 PF00639 PPIC-type PPIASE domain TSH58p_28270 PF09312 SurA N-terminal domain TSH58p_28275 PF04166 Pyridoxal phosphate biosynthetic protein PdxA TSH58p_28280 PF00512 His Kinase A (phospho-acceptor) domain TSH58p_28280 PF00989 PAS fold TSH58p_28280 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase TSH58p_28290 PF01464 Transglycosylase SLT domain TSH58p_28305 PF00398 Ribosomal RNA adenine dimethylase TSH58p_28310 PF00625 Guanylate kinase TSH58p_28315 PF03755 YicC-like family, N-terminal region TSH58p_28315 PF08340 Domain of unknown function (DUF1732) TSH58p_28320 PF00106 short chain dehydrogenase TSH58p_28325 PF00398 Ribosomal RNA adenine dimethylase TSH58p_28330 PF06055 Exopolysaccharide synthesis, ExoD TSH58p_28335 PF00005 ABC transporter TSH58p_28335 PF12848 ABC transporter TSH58p_28340 PF00334 Nucleoside diphosphate kinase TSH58p_28355 PF00551 Formyl transferase TSH58p_28360 PF00586 AIR synthase related protein, N-terminal domain TSH58p_28360 PF02769 AIR synthase related protein, C-terminal domain TSH58p_28370 PF01066 CDP-alcohol phosphatidyltransferase TSH58p_28375 PF01594 AI-2E family transporter TSH58p_28385 PF00106 short chain dehydrogenase TSH58p_28390 PF01928 CYTH domain TSH58p_28400 PF13089 Polyphosphate kinase N-terminal domain TSH58p_28400 PF17941 Polyphosphate kinase C-terminal domain 1 TSH58p_28400 PF13090 Polyphosphate kinase C-terminal domain 2 TSH58p_28400 PF02503 Polyphosphate kinase middle domain TSH58p_28405 PF02541 Ppx/GppA phosphatase family TSH58p_28415 PF01612 3'-5' exonuclease TSH58p_28415 PF00570 HRDC domain TSH58p_28420 PF00152 tRNA synthetases class II (D, K and N) TSH58p_28420 PF01336 OB-fold nucleic acid binding domain TSH58p_28420 PF02938 GAD domain TSH58p_28435 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain TSH58p_28435 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain TSH58p_28440 PF08448 PAS fold TSH58p_28440 PF08447 PAS fold TSH58p_28440 PF13426 PAS domain TSH58p_28440 PF00563 EAL domain TSH58p_28440 PF00990 Diguanylate cyclase, GGDEF domain TSH58p_28440 PF05231 MASE1 TSH58p_28445 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase TSH58p_28445 PF00512 His Kinase A (phospho-acceptor) domain TSH58p_28445 PF00989 PAS fold TSH58p_28450 PF00072 Response regulator receiver domain TSH58p_28455 PF00072 Response regulator receiver domain TSH58p_28455 PF00990 Diguanylate cyclase, GGDEF domain TSH58p_28460 PF00471 Ribosomal protein L33 TSH58p_28465 PF13180 PDZ domain TSH58p_28465 PF03572 Peptidase family S41 TSH58p_28470 PF08206 Ribonuclease B OB domain TSH58p_28470 PF08461 Ribonuclease R winged-helix domain TSH58p_28470 PF00575 S1 RNA binding domain TSH58p_28470 PF17876 Cold shock domain TSH58p_28470 PF00773 RNB domain TSH58p_28480 PF01751 Toprim domain TSH58p_28480 PF13368 Topoisomerase C-terminal repeat TSH58p_28480 PF01131 DNA topoisomerase TSH58p_28480 PF01396 Topoisomerase DNA binding C4 zinc finger TSH58p_28485 PF02481 DNA recombination-mediator protein A TSH58p_28485 PF17782 DprA winged helix domain TSH58p_28505 PF07690 Major Facilitator Superfamily TSH58p_28540 PF00989 PAS fold TSH58p_28540 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase TSH58p_28540 PF00512 His Kinase A (phospho-acceptor) domain TSH58p_28540 PF00072 Response regulator receiver domain TSH58p_28540 PF01627 Hpt domain TSH58p_28540 PF00497 Bacterial extracellular solute-binding proteins, family 3 TSH58p_28545 PF00486 Transcriptional regulatory protein, C terminal TSH58p_28545 PF00072 Response regulator receiver domain TSH58p_28575 PF01177 Asp/Glu/Hydantoin racemase TSH58p_28580 PF00528 Binding-protein-dependent transport system inner membrane component TSH58p_28585 PF00528 Binding-protein-dependent transport system inner membrane component TSH58p_28595 PF08402 TOBE domain TSH58p_28595 PF00005 ABC transporter TSH58p_28605 PF00762 Ferrochelatase TSH58p_28610 PF04069 Substrate binding domain of ABC-type glycine betaine transport system TSH58p_28615 PF00528 Binding-protein-dependent transport system inner membrane component TSH58p_28620 PF00005 ABC transporter TSH58p_28625 PF00528 Binding-protein-dependent transport system inner membrane component TSH58p_28635 PF04972 BON domain TSH58p_28635 PF01476 LysM domain TSH58p_28640 PF00595 PDZ domain TSH58p_28650 PF00378 Enoyl-CoA hydratase/isomerase TSH58p_28655 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase TSH58p_28655 PF00393 6-phosphogluconate dehydrogenase, C-terminal domain TSH58p_28660 PF00356 Bacterial regulatory proteins, lacI family TSH58p_28660 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family TSH58p_28665 PF01202 Shikimate kinase TSH58p_28670 PF00920 Dehydratase family TSH58p_28675 PF01557 Fumarylacetoacetate (FAA) hydrolase family TSH58p_28680 PF00356 Bacterial regulatory proteins, lacI family TSH58p_28680 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family TSH58p_28685 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain TSH58p_28685 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain TSH58p_28690 PF00005 ABC transporter TSH58p_28700 PF00528 Binding-protein-dependent transport system inner membrane component TSH58p_28705 PF00528 Binding-protein-dependent transport system inner membrane component TSH58p_28710 PF00994 Probable molybdopterin binding domain TSH58p_28710 PF03454 MoeA C-terminal region (domain IV) TSH58p_28710 PF03453 MoeA N-terminal region (domain I and II) TSH58p_28730 PF00106 short chain dehydrogenase TSH58p_28735 PF01925 Sulfite exporter TauE/SafE TSH58p_28750 PF00692 dUTPase TSH58p_28760 PF00043 Glutathione S-transferase, C-terminal domain TSH58p_28760 PF13417 Glutathione S-transferase, N-terminal domain TSH58p_28765 PF16123 Hydroxyacylglutathione hydrolase C-terminus TSH58p_28765 PF00753 Metallo-beta-lactamase superfamily TSH58p_28785 PF00561 alpha/beta hydrolase fold TSH58p_28785 PF07021 Methionine biosynthesis protein MetW TSH58p_28790 PF00561 alpha/beta hydrolase fold TSH58p_28800 PF00155 Aminotransferase class I and II TSH58p_28805 PF02153 Prephenate dehydrogenase TSH58p_28820 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family TSH58p_28820 PF03466 LysR substrate binding domain TSH58p_28825 PF10417 C-terminal domain of 1-Cys peroxiredoxin TSH58p_28825 PF00578 AhpC/TSA family TSH58p_28830 PF13192 Thioredoxin domain TSH58p_28830 PF07992 Pyridine nucleotide-disulphide oxidoreductase TSH58p_28835 PF01315 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain TSH58p_28835 PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase TSH58p_28840 PF00941 FAD binding domain in molybdopterin dehydrogenase TSH58p_28840 PF03450 CO dehydrogenase flavoprotein C-terminal domain TSH58p_28845 PF01799 [2Fe-2S] binding domain TSH58p_28845 PF00111 2Fe-2S iron-sulfur cluster binding domain TSH58p_28855 PF04307 LexA-binding, inner membrane-associated putative hydrolase TSH58p_28865 PF07883 Cupin domain TSH58p_28875 PF00486 Transcriptional regulatory protein, C terminal TSH58p_28875 PF00072 Response regulator receiver domain TSH58p_28880 PF02660 Glycerol-3-phosphate acyltransferase TSH58p_28885 PF01979 Amidohydrolase family TSH58p_28890 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain TSH58p_28890 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain TSH58p_28905 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family TSH58p_28905 PF03466 LysR substrate binding domain TSH58p_28930 PF03652 Holliday junction resolvase TSH58p_28935 PF00672 HAMP domain TSH58p_28935 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain TSH58p_28940 PF02686 Glu-tRNAGln amidotransferase C subunit TSH58p_28945 PF01425 Amidase TSH58p_28950 PF02637 GatB domain TSH58p_28950 PF02934 GatB/GatE catalytic domain TSH58p_28955 PF00512 His Kinase A (phospho-acceptor) domain TSH58p_28955 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase TSH58p_28980 PF02668 Taurine catabolism dioxygenase TauD, TfdA family TSH58p_28990 PF00005 ABC transporter TSH58p_28995 PF00528 Binding-protein-dependent transport system inner membrane component TSH58p_29000 PF00291 Pyridoxal-phosphate dependent enzyme TSH58p_29005 PF02615 Malate/L-lactate dehydrogenase TSH58p_29010 PF01842 ACT domain TSH58p_29010 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain TSH58p_29010 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain TSH58p_29020 PF07859 alpha/beta hydrolase fold TSH58p_29030 PF00224 Pyruvate kinase, barrel domain TSH58p_29030 PF02887 Pyruvate kinase, alpha/beta domain TSH58p_29035 PF00248 Aldo/keto reductase family TSH58p_29040 PF03466 LysR substrate binding domain TSH58p_29040 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family TSH58p_29045 PF00149 Calcineurin-like phosphoesterase TSH58p_29080 PF01814 Hemerythrin HHE cation binding domain TSH58p_29095 PF00156 Phosphoribosyl transferase domain TSH58p_29100 PF02405 Permease MlaE TSH58p_29105 PF00005 ABC transporter TSH58p_29125 PF04542 Sigma-70 region 2 TSH58p_29125 PF04545 Sigma-70, region 4 TSH58p_29125 PF00140 Sigma-70 factor, region 1.2 TSH58p_29130 PF01654 Cytochrome bd terminal oxidase subunit I TSH58p_29135 PF02322 Cytochrome bd terminal oxidase subunit II TSH58p_29155 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III TSH58p_29155 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal TSH58p_29175 PF12804 MobA-like NTP transferase domain TSH58p_29175 PF00132 Bacterial transferase hexapeptide (six repeats) TSH58p_29190 PF08666 SAF domain TSH58p_29190 PF03102 NeuB family TSH58p_29195 PF02348 Cytidylyltransferase TSH58p_29205 PF00364 Biotin-requiring enzyme TSH58p_29205 PF00561 alpha/beta hydrolase fold TSH58p_29225 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal TSH58p_29225 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III TSH58p_29230 PF00669 Bacterial flagellin N-terminal helical region TSH58p_29230 PF00700 Bacterial flagellin C-terminal helical region TSH58p_29270 PF04972 BON domain TSH58p_29275 PF01520 N-acetylmuramoyl-L-alanine amidase TSH58p_29300 PF00551 Formyl transferase TSH58p_29305 PF00072 Response regulator receiver domain TSH58p_29320 PF13193 AMP-binding enzyme C-terminal domain TSH58p_29320 PF00501 AMP-binding enzyme TSH58p_29330 PF00398 Ribosomal RNA adenine dimethylase TSH58p_29335 PF04794 YdjC-like protein TSH58p_29340 PF01979 Amidohydrolase family TSH58p_29345 PF01175 Urocanase Rossmann-like domain TSH58p_29345 PF17391 Urocanase N-terminal domain TSH58p_29345 PF17392 Urocanase C-terminal domain TSH58p_29350 PF00892 EamA-like transporter family TSH58p_29360 PF08241 Methyltransferase domain TSH58p_29370 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle TSH58p_29375 PF00528 Binding-protein-dependent transport system inner membrane component TSH58p_29380 PF12911 N-terminal TM domain of oligopeptide transport permease C TSH58p_29380 PF00528 Binding-protein-dependent transport system inner membrane component TSH58p_29385 PF00005 ABC transporter TSH58p_29385 PF08352 Oligopeptide/dipeptide transporter, C-terminal region TSH58p_29390 PF00005 ABC transporter TSH58p_29390 PF08352 Oligopeptide/dipeptide transporter, C-terminal region TSH58p_29425 PF04461 Protein of unknown function (DUF520) TSH58p_29440 PF02954 Bacterial regulatory protein, Fis family TSH58p_29440 PF00072 Response regulator receiver domain TSH58p_29440 PF00158 Sigma-54 interaction domain TSH58p_29445 PF04542 Sigma-70 region 2 TSH58p_29445 PF00140 Sigma-70 factor, region 1.2 TSH58p_29445 PF04545 Sigma-70, region 4 TSH58p_29450 PF00990 Diguanylate cyclase, GGDEF domain TSH58p_29450 PF00563 EAL domain TSH58p_29450 PF08448 PAS fold TSH58p_29450 PF08447 PAS fold TSH58p_29455 PF00999 Sodium/hydrogen exchanger family TSH58p_29455 PF03471 Transporter associated domain TSH58p_29455 PF02080 TrkA-C domain TSH58p_29480 PF01734 Patatin-like phospholipase TSH58p_29485 PF00664 ABC transporter transmembrane region TSH58p_29485 PF00005 ABC transporter TSH58p_29490 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase TSH58p_29490 PF00512 His Kinase A (phospho-acceptor) domain TSH58p_29490 PF00989 PAS fold TSH58p_29515 PF04378 Ribosomal RNA large subunit methyltransferase D, RlmJ TSH58p_29530 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family TSH58p_29530 PF03466 LysR substrate binding domain TSH58p_29535 PF03358 NADPH-dependent FMN reductase TSH58p_29540 PF13409 Glutathione S-transferase, N-terminal domain TSH58p_29550 PF00072 Response regulator receiver domain TSH58p_29550 PF00196 Bacterial regulatory proteins, luxR family TSH58p_29560 PF07992 Pyridine nucleotide-disulphide oxidoreductase TSH58p_29575 PF10503 Esterase PHB depolymerase TSH58p_29595 PF01435 Peptidase family M48 TSH58p_29605 PF01292 Prokaryotic cytochrome b561 TSH58p_29625 PF11154 Protein of unknown function (DUF2934) TSH58p_29625 PF00430 ATP synthase B/B' CF(0) TSH58p_29635 PF05362 Lon protease (S16) C-terminal proteolytic domain TSH58p_29635 PF00004 ATPase family associated with various cellular activities (AAA) TSH58p_29635 PF02190 ATP-dependent protease La (LON) substrate-binding domain TSH58p_29645 PF12802 MarR family TSH58p_29655 PF13426 PAS domain TSH58p_29655 PF07568 Histidine kinase TSH58p_29655 PF13581 Histidine kinase-like ATPase domain TSH58p_29670 PF01192 RNA polymerase Rpb6 TSH58p_29675 PF13291 ACT domain TSH58p_29675 PF02824 TGS domain TSH58p_29675 PF04607 Region found in RelA / SpoT proteins TSH58p_29685 PF03740 Pyridoxal phosphate biosynthesis protein PdxJ TSH58p_29690 PF01648 4'-phosphopantetheinyl transferase superfamily TSH58p_29695 PF10502 Signal peptidase, peptidase S26 TSH58p_29700 PF14622 Ribonuclease-III-like TSH58p_29700 PF00035 Double-stranded RNA binding motif TSH58p_29705 PF07650 KH domain TSH58p_29705 PF01926 50S ribosome-binding GTPase TSH58p_29710 PF04317 YcjX-like family, DUF463 TSH58p_29715 PF05128 Domain of unknown function (DUF697) TSH58p_29735 PF00574 Clp protease TSH58p_29740 PF00535 Glycosyl transferase family 2 TSH58p_29745 PF00149 Calcineurin-like phosphoesterase TSH58p_29750 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion TSH58p_29755 PF00873 AcrB/AcrD/AcrF family TSH58p_29760 PF01841 Transglutaminase-like superfamily TSH58p_29760 PF08379 Bacterial transglutaminase-like N-terminal region TSH58p_29765 PF14403 Circularly permuted ATP-grasp type 2 TSH58p_29765 PF04168 A predicted alpha-helical domain with a conserved ER motif. TSH58p_29785 PF01263 Aldose 1-epimerase TSH58p_29790 PF00069 Protein kinase domain TSH58p_29790 PF03793 PASTA domain TSH58p_29795 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD TSH58p_29825 PF04453 LPS transport system D TSH58p_29825 PF03968 OstA-like protein TSH58p_29835 PF00270 DEAD/DEAH box helicase TSH58p_29835 PF00271 Helicase conserved C-terminal domain TSH58p_29845 PF12697 Alpha/beta hydrolase family TSH58p_29860 PF00204 DNA gyrase B TSH58p_29860 PF00986 DNA gyrase B subunit, carboxyl terminus TSH58p_29860 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase TSH58p_29860 PF01751 Toprim domain TSH58p_29865 PF03061 Thioesterase superfamily TSH58p_29870 PF04977 Septum formation initiator TSH58p_29875 PF00676 Dehydrogenase E1 component TSH58p_29880 PF02779 Transketolase, pyrimidine binding domain TSH58p_29880 PF00364 Biotin-requiring enzyme TSH58p_29880 PF02780 Transketolase, C-terminal domain TSH58p_29885 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) TSH58p_29885 PF00364 Biotin-requiring enzyme TSH58p_29885 PF02817 e3 binding domain TSH58p_29890 PF07992 Pyridine nucleotide-disulphide oxidoreductase TSH58p_29890 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain TSH58p_29895 PF16881 N-terminal domain of lipoyl synthase of Radical_SAM family TSH58p_29895 PF04055 Radical SAM superfamily TSH58p_29900 PF03364 Polyketide cyclase / dehydrase and lipid transport TSH58p_29905 PF02464 Competence-damaged protein TSH58p_29905 PF18146 Damage-inducible protein CinA KH domain TSH58p_29905 PF00994 Probable molybdopterin binding domain TSH58p_29910 PF01128 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase TSH58p_29910 PF02542 YgbB family TSH58p_29915 PF01578 Cytochrome C assembly protein TSH58p_29920 PF01207 Dihydrouridine synthase (Dus) TSH58p_29925 PF00989 PAS fold TSH58p_29925 PF00512 His Kinase A (phospho-acceptor) domain TSH58p_29925 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase TSH58p_29930 PF00158 Sigma-54 interaction domain TSH58p_29930 PF00072 Response regulator receiver domain TSH58p_29930 PF02954 Bacterial regulatory protein, Fis family TSH58p_29935 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase TSH58p_29935 PF00672 HAMP domain TSH58p_29940 PF00158 Sigma-54 interaction domain TSH58p_29940 PF02954 Bacterial regulatory protein, Fis family TSH58p_29940 PF00072 Response regulator receiver domain TSH58p_29980 PF03852 DNA mismatch endonuclease Vsr TSH58p_29990 PF00145 C-5 cytosine-specific DNA methylase TSH58p_30090 PF02899 Phage integrase, N-terminal SAM-like domain TSH58p_30090 PF00589 Phage integrase family TSH58p_30125 PF07015 VirC1 protein TSH58p_30140 PF03852 DNA mismatch endonuclease Vsr TSH58p_30150 PF00145 C-5 cytosine-specific DNA methylase TSH58p_30190 PF01032 FecCD transport family TSH58p_30195 PF04954 Siderophore-interacting protein TSH58p_30195 PF08021 Siderophore-interacting FAD-binding domain TSH58p_30200 PF00005 ABC transporter TSH58p_30215 PF02803 Thiolase, C-terminal domain TSH58p_30215 PF00108 Thiolase, N-terminal domain TSH58p_30220 PF07690 Major Facilitator Superfamily TSH58p_30225 PF03466 LysR substrate binding domain TSH58p_30225 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family TSH58p_30235 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion TSH58p_30240 PF00873 AcrB/AcrD/AcrF family TSH58p_30255 PF00593 TonB dependent receptor TSH58p_30255 PF07715 TonB-dependent Receptor Plug Domain TSH58p_30260 PF00005 ABC transporter TSH58p_30270 PF01032 FecCD transport family TSH58p_30275 PF00005 ABC transporter TSH58p_30275 PF00664 ABC transporter transmembrane region TSH58p_30285 PF13545 Crp-like helix-turn-helix domain TSH58p_30310 PF00034 Cytochrome c TSH58p_30325 PF02416 mttA/Hcf106 family TSH58p_30335 PF05573 NosL TSH58p_30340 PF12679 ABC-2 family transporter protein TSH58p_30345 PF00005 ABC transporter TSH58p_30350 PF05048 Periplasmic copper-binding protein (NosD) TSH58p_30355 PF18793 Nitrous oxide reductase propeller repeat 2 TSH58p_30355 PF18764 Nitrous oxide reductase propeller repeat TSH58p_30355 PF13473 Cupredoxin-like domain TSH58p_30360 PF12801 4Fe-4S binding domain TSH58p_30360 PF04205 FMN-binding domain TSH58p_30370 PF00092 von Willebrand factor type A domain TSH58p_30375 PF08406 CbbQ/NirQ/NorQ C-terminal TSH58p_30375 PF07728 AAA domain (dynein-related subfamily) TSH58p_30380 PF00115 Cytochrome C and Quinol oxidase polypeptide I TSH58p_30385 PF00034 Cytochrome c TSH58p_30390 PF00581 Rhodanese-like domain TSH58p_30400 PF05995 Cysteine dioxygenase type I TSH58p_30420 PF07992 Pyridine nucleotide-disulphide oxidoreductase TSH58p_30420 PF04324 BFD-like [2Fe-2S] binding domain TSH58p_30435 PF00005 ABC transporter TSH58p_30440 PF00005 ABC transporter TSH58p_30440 PF12399 Branched-chain amino acid ATP-binding cassette transporter TSH58p_30450 PF02653 Branched-chain amino acid transport system / permease component TSH58p_30455 PF01266 FAD dependent oxidoreductase TSH58p_30465 PF08669 Glycine cleavage T-protein C-terminal barrel domain TSH58p_30465 PF01571 Aminomethyltransferase folate-binding domain TSH58p_30465 PF17806 Sarcosine oxidase A3 domain TSH58p_30465 PF07992 Pyridine nucleotide-disulphide oxidoreductase TSH58p_30475 PF01244 Membrane dipeptidase (Peptidase family M19) TSH58p_30485 PF13454 FAD-NAD(P)-binding TSH58p_30490 PF03328 HpcH/HpaI aldolase/citrate lyase family TSH58p_30495 PF03180 NLPA lipoprotein TSH58p_30505 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component TSH58p_30515 PF03480 Bacterial extracellular solute-binding protein, family 7 TSH58p_30520 PF02780 Transketolase, C-terminal domain TSH58p_30520 PF02779 Transketolase, pyrimidine binding domain TSH58p_30525 PF00676 Dehydrogenase E1 component TSH58p_30530 PF07883 Cupin domain TSH58p_30530 PF01381 Helix-turn-helix TSH58p_30540 PF00266 Aminotransferase class-V TSH58p_30545 PF00132 Bacterial transferase hexapeptide (six repeats) TSH58p_30545 PF06426 Serine acetyltransferase, N-terminal TSH58p_30550 PF00118 TCP-1/cpn60 chaperonin family TSH58p_30555 PF00166 Chaperonin 10 Kd subunit TSH58p_30560 PF00155 Aminotransferase class I and II TSH58p_30565 PF01053 Cys/Met metabolism PLP-dependent enzyme TSH58p_30570 PF03180 NLPA lipoprotein TSH58p_30575 PF09383 NIL domain TSH58p_30575 PF00005 ABC transporter TSH58p_30580 PF00528 Binding-protein-dependent transport system inner membrane component TSH58p_30590 PF07969 Amidohydrolase family TSH58p_30595 PF00528 Binding-protein-dependent transport system inner membrane component TSH58p_30600 PF00005 ABC transporter TSH58p_30615 PF00890 FAD binding domain TSH58p_30615 PF02910 Fumarate reductase flavoprotein C-term TSH58p_30620 PF01053 Cys/Met metabolism PLP-dependent enzyme TSH58p_30630 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle TSH58p_30635 PF00384 Molybdopterin oxidoreductase TSH58p_30635 PF01568 Molydopterin dinucleotide binding domain TSH58p_30650 PF05378 Hydantoinase/oxoprolinase N-terminal region TSH58p_30650 PF01968 Hydantoinase/oxoprolinase TSH58p_30665 PF08402 TOBE domain TSH58p_30665 PF00005 ABC transporter TSH58p_30670 PF00528 Binding-protein-dependent transport system inner membrane component TSH58p_30675 PF00528 Binding-protein-dependent transport system inner membrane component TSH58p_30680 PF09339 IclR helix-turn-helix domain TSH58p_30690 PF01381 Helix-turn-helix TSH58p_30690 PF07883 Cupin domain TSH58p_30700 PF00857 Isochorismatase family TSH58p_30705 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family TSH58p_30705 PF03466 LysR substrate binding domain TSH58p_30710 PF01276 Orn/Lys/Arg decarboxylase, major domain TSH58p_30710 PF03711 Orn/Lys/Arg decarboxylase, C-terminal domain TSH58p_30715 PF00892 EamA-like transporter family TSH58p_30720 PF08352 Oligopeptide/dipeptide transporter, C-terminal region TSH58p_30720 PF00005 ABC transporter TSH58p_30725 PF08352 Oligopeptide/dipeptide transporter, C-terminal region TSH58p_30725 PF00005 ABC transporter TSH58p_30730 PF12911 N-terminal TM domain of oligopeptide transport permease C TSH58p_30730 PF00528 Binding-protein-dependent transport system inner membrane component TSH58p_30735 PF00528 Binding-protein-dependent transport system inner membrane component TSH58p_30740 PF01425 Amidase TSH58p_30745 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle TSH58p_30750 PF03737 Aldolase/RraA TSH58p_30755 PF02558 Ketopantoate reductase PanE/ApbA TSH58p_30755 PF08546 Ketopantoate reductase PanE/ApbA C terminal TSH58p_30760 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle TSH58p_30765 PF08352 Oligopeptide/dipeptide transporter, C-terminal region TSH58p_30765 PF00005 ABC transporter TSH58p_30770 PF00005 ABC transporter TSH58p_30770 PF08352 Oligopeptide/dipeptide transporter, C-terminal region TSH58p_30775 PF00528 Binding-protein-dependent transport system inner membrane component TSH58p_30775 PF12911 N-terminal TM domain of oligopeptide transport permease C TSH58p_30780 PF00528 Binding-protein-dependent transport system inner membrane component TSH58p_30785 PF13378 Enolase C-terminal domain-like TSH58p_30785 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain TSH58p_30790 PF03737 Aldolase/RraA TSH58p_30800 PF03401 Tripartite tricarboxylate transporter family receptor TSH58p_30805 PF03737 Aldolase/RraA TSH58p_30820 PF01970 Tripartite tricarboxylate transporter TctA family TSH58p_30845 PF00528 Binding-protein-dependent transport system inner membrane component TSH58p_30850 PF00005 ABC transporter TSH58p_30855 PF00392 Bacterial regulatory proteins, gntR family TSH58p_30855 PF07729 FCD domain TSH58p_30875 PF07729 FCD domain TSH58p_30875 PF00392 Bacterial regulatory proteins, gntR family TSH58p_30880 PF02668 Taurine catabolism dioxygenase TauD, TfdA family TSH58p_30885 PF00005 ABC transporter TSH58p_30890 PF00528 Binding-protein-dependent transport system inner membrane component TSH58p_30900 PF02668 Taurine catabolism dioxygenase TauD, TfdA family TSH58p_30910 PF04069 Substrate binding domain of ABC-type glycine betaine transport system TSH58p_30915 PF00005 ABC transporter TSH58p_30920 PF00528 Binding-protein-dependent transport system inner membrane component TSH58p_30925 PF00884 Sulfatase TSH58p_30925 PF12411 Choline sulfatase enzyme C terminal TSH58p_30930 PF02668 Taurine catabolism dioxygenase TauD, TfdA family TSH58p_30935 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase TSH58p_30935 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase TSH58p_30940 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component TSH58p_30945 PF03480 Bacterial extracellular solute-binding protein, family 7 TSH58p_30950 PF02779 Transketolase, pyrimidine binding domain TSH58p_30950 PF02780 Transketolase, C-terminal domain TSH58p_30955 PF00456 Transketolase, thiamine diphosphate binding domain TSH58p_30965 PF03466 LysR substrate binding domain TSH58p_30965 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family TSH58p_30980 PF00593 TonB dependent receptor TSH58p_30980 PF07715 TonB-dependent Receptor Plug Domain TSH58p_30985 PF00005 ABC transporter TSH58p_30995 PF01339 CheB methylesterase TSH58p_30995 PF00072 Response regulator receiver domain TSH58p_31000 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) TSH58p_31000 PF00072 Response regulator receiver domain TSH58p_31000 PF01627 Hpt domain TSH58p_31000 PF00672 HAMP domain TSH58p_31000 PF00512 His Kinase A (phospho-acceptor) domain TSH58p_31000 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase TSH58p_31005 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle TSH58p_31010 PF07840 FadR C-terminal domain TSH58p_31010 PF00392 Bacterial regulatory proteins, gntR family TSH58p_31015 PF00378 Enoyl-CoA hydratase/isomerase TSH58p_31020 PF00171 Aldehyde dehydrogenase family TSH58p_31030 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase TSH58p_31030 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase TSH58p_31035 PF08240 Alcohol dehydrogenase GroES-like domain TSH58p_31035 PF00107 Zinc-binding dehydrogenase TSH58p_31040 PF00501 AMP-binding enzyme TSH58p_31040 PF13193 AMP-binding enzyme C-terminal domain TSH58p_31045 PF13533 Biotin-lipoyl like TSH58p_31060 PF02311 AraC-like ligand binding domain TSH58p_31060 PF12833 Helix-turn-helix domain TSH58p_31065 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family TSH58p_31065 PF03466 LysR substrate binding domain TSH58p_31085 PF16220 Domain of unknown function (DUF4880) TSH58p_31085 PF04773 FecR protein TSH58p_31090 PF00593 TonB dependent receptor TSH58p_31090 PF07715 TonB-dependent Receptor Plug Domain TSH58p_31095 PF03929 PepSY-associated TM region TSH58p_31110 PF03466 LysR substrate binding domain TSH58p_31110 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family TSH58p_31120 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle TSH58p_31125 PF00528 Binding-protein-dependent transport system inner membrane component TSH58p_31135 PF00005 ABC transporter TSH58p_31135 PF08352 Oligopeptide/dipeptide transporter, C-terminal region TSH58p_31140 PF01042 Endoribonuclease L-PSP TSH58p_31145 PF00491 Arginase family TSH58p_31150 PF01546 Peptidase family M20/M25/M40 TSH58p_31150 PF07687 Peptidase dimerisation domain TSH58p_31170 PF02812 Glu/Leu/Phe/Val dehydrogenase, dimerisation domain TSH58p_31170 PF00208 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase TSH58p_31175 PF01037 Lrp/AsnC ligand binding domain TSH58p_31180 PF00005 ABC transporter TSH58p_31185 PF12399 Branched-chain amino acid ATP-binding cassette transporter TSH58p_31185 PF00005 ABC transporter TSH58p_31190 PF02653 Branched-chain amino acid transport system / permease component TSH58p_31190 PF11862 Domain of unknown function (DUF3382) TSH58p_31200 PF04348 LppC putative lipoprotein TSH58p_31235 PF07568 Histidine kinase TSH58p_31235 PF13581 Histidine kinase-like ATPase domain TSH58p_31235 PF13426 PAS domain TSH58p_31245 PF07167 Poly-beta-hydroxybutyrate polymerase (PhaC) N-terminus TSH58p_31265 PF00501 AMP-binding enzyme TSH58p_31265 PF13193 AMP-binding enzyme C-terminal domain TSH58p_31270 PF14572 Phosphoribosyl synthetase-associated domain TSH58p_31270 PF13793 N-terminal domain of ribose phosphate pyrophosphokinase TSH58p_31280 PF04095 Nicotinate phosphoribosyltransferase (NAPRTase) family TSH58p_31280 PF17767 Nicotinate phosphoribosyltransferase (NAPRTase) N-terminal domain TSH58p_31295 PF00011 Hsp20/alpha crystallin family TSH58p_31305 PF02525 Flavodoxin-like fold TSH58p_31310 PF00391 PEP-utilising enzyme, mobile domain TSH58p_31310 PF02896 PEP-utilising enzyme, TIM barrel domain TSH58p_31310 PF01326 Pyruvate phosphate dikinase, PEP/pyruvate binding domain TSH58p_31315 PF00005 ABC transporter TSH58p_31315 PF12704 MacB-like periplasmic core domain TSH58p_31315 PF02687 FtsX-like permease family TSH58p_31320 PF00005 ABC transporter TSH58p_31320 PF02687 FtsX-like permease family TSH58p_31320 PF12704 MacB-like periplasmic core domain TSH58p_31330 PF00690 Cation transporter/ATPase, N-terminus TSH58p_31330 PF00689 Cation transporting ATPase, C-terminus TSH58p_31340 PF00248 Aldo/keto reductase family TSH58p_31350 PF13614 AAA domain TSH58p_31355 PF17762 HTH domain found in ParB protein TSH58p_31355 PF02195 ParB-like nuclease domain TSH58p_31365 PF03354 Phage Terminase TSH58p_31395 PF00593 TonB dependent receptor TSH58p_31395 PF07715 TonB-dependent Receptor Plug Domain TSH58p_31405 PF04545 Sigma-70, region 4 TSH58p_31405 PF04542 Sigma-70 region 2 TSH58p_31415 PF01979 Amidohydrolase family TSH58p_31415 PF00449 Urease alpha-subunit, N-terminal domain TSH58p_31420 PF00392 Bacterial regulatory proteins, gntR family TSH58p_31420 PF07729 FCD domain TSH58p_31435 PF00701 Dihydrodipicolinate synthetase family TSH58p_31440 PF04324 BFD-like [2Fe-2S] binding domain TSH58p_31440 PF07992 Pyridine nucleotide-disulphide oxidoreductase TSH58p_31445 PF00005 ABC transporter TSH58p_31450 PF00392 Bacterial regulatory proteins, gntR family TSH58p_31450 PF07729 FCD domain TSH58p_31455 PF02782 FGGY family of carbohydrate kinases, C-terminal domain TSH58p_31455 PF00370 FGGY family of carbohydrate kinases, N-terminal domain TSH58p_31465 PF02894 Oxidoreductase family, C-terminal alpha/beta domain TSH58p_31465 PF01408 Oxidoreductase family, NAD-binding Rossmann fold TSH58p_31475 PF13407 Periplasmic binding protein domain TSH58p_31480 PF02653 Branched-chain amino acid transport system / permease component TSH58p_31485 PF00005 ABC transporter TSH58p_31490 PF00480 ROK family TSH58p_31490 PF01325 Iron dependent repressor, N-terminal DNA binding domain TSH58p_31495 PF01042 Endoribonuclease L-PSP TSH58p_31500 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family TSH58p_31500 PF03466 LysR substrate binding domain TSH58p_31515 PF02668 Taurine catabolism dioxygenase TauD, TfdA family TSH58p_31535 PF00005 ABC transporter TSH58p_31545 PF09084 NMT1/THI5 like TSH58p_31550 PF01979 Amidohydrolase family TSH58p_31555 PF03069 Acetamidase/Formamidase family TSH58p_31565 PF01979 Amidohydrolase family TSH58p_31575 PF00529 HlyD membrane-fusion protein of T1SS TSH58p_31575 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion TSH58p_31585 PF13533 Biotin-lipoyl like TSH58p_31590 PF00005 ABC transporter TSH58p_31600 PF00593 TonB dependent receptor TSH58p_31600 PF07715 TonB-dependent Receptor Plug Domain TSH58p_31605 PF06228 Haem utilisation ChuX/HutX TSH58p_31610 PF13493 Domain of unknown function (DUF4118) TSH58p_31610 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase TSH58p_31610 PF00512 His Kinase A (phospho-acceptor) domain TSH58p_31610 PF00582 Universal stress protein family TSH58p_31610 PF02702 Osmosensitive K+ channel His kinase sensor domain TSH58p_31615 PF00486 Transcriptional regulatory protein, C terminal TSH58p_31615 PF00072 Response regulator receiver domain TSH58p_31620 PF00005 ABC transporter TSH58p_31625 PF01032 FecCD transport family TSH58p_31635 PF05171 Haemin-degrading HemS.ChuX domain TSH58p_31640 PF00795 Carbon-nitrogen hydrolase TSH58p_31645 PF01613 Flavin reductase like domain TSH58p_31655 PF00005 ABC transporter TSH58p_31660 PF00528 Binding-protein-dependent transport system inner membrane component TSH58p_31670 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family TSH58p_31670 PF03466 LysR substrate binding domain TSH58p_31680 PF00175 Oxidoreductase NAD-binding domain TSH58p_31680 PF00970 Oxidoreductase FAD-binding domain TSH58p_31680 PF00042 Globin TSH58p_31685 PF02798 Glutathione S-transferase, N-terminal domain TSH58p_31690 PF07729 FCD domain TSH58p_31690 PF00392 Bacterial regulatory proteins, gntR family TSH58p_31695 PF01636 Phosphotransferase enzyme family TSH58p_31700 PF00202 Aminotransferase class-III TSH58p_31705 PF12706 Beta-lactamase superfamily domain TSH58p_31705 PF00753 Metallo-beta-lactamase superfamily TSH58p_31710 PF00528 Binding-protein-dependent transport system inner membrane component TSH58p_31725 PF00005 ABC transporter TSH58p_31725 PF17912 MalK OB fold domain TSH58p_31740 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase TSH58p_31740 PF07730 Histidine kinase TSH58p_31740 PF05231 MASE1 TSH58p_31745 PF00196 Bacterial regulatory proteins, luxR family TSH58p_31745 PF00072 Response regulator receiver domain TSH58p_31750 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain TSH58p_31750 PF00672 HAMP domain TSH58p_31760 PF13416 Bacterial extracellular solute-binding protein TSH58p_31765 PF08402 TOBE domain TSH58p_31765 PF00005 ABC transporter TSH58p_31770 PF00528 Binding-protein-dependent transport system inner membrane component TSH58p_31775 PF00528 Binding-protein-dependent transport system inner membrane component TSH58p_31780 PF05544 Proline racemase TSH58p_31785 PF00392 Bacterial regulatory proteins, gntR family TSH58p_31785 PF07729 FCD domain TSH58p_31795 PF00330 Aconitase family (aconitate hydratase) TSH58p_31800 PF00694 Aconitase C-terminal domain TSH58p_31810 PF00005 ABC transporter TSH58p_31815 PF00528 Binding-protein-dependent transport system inner membrane component TSH58p_31830 PF03793 PASTA domain TSH58p_31830 PF00069 Protein kinase domain TSH58p_31855 PF05985 Ethanolamine ammonia-lyase light chain (EutC) TSH58p_31860 PF06751 Ethanolamine ammonia lyase large subunit (EutB) TSH58p_31865 PF00459 Inositol monophosphatase family TSH58p_31875 PF08402 TOBE domain TSH58p_31875 PF00005 ABC transporter TSH58p_31880 PF00528 Binding-protein-dependent transport system inner membrane component TSH58p_31885 PF00455 DeoR C terminal sensor domain TSH58p_31885 PF08220 DeoR-like helix-turn-helix domain TSH58p_31910 PF00005 ABC transporter TSH58p_31915 PF00528 Binding-protein-dependent transport system inner membrane component TSH58p_31925 PF00378 Enoyl-CoA hydratase/isomerase TSH58p_31930 PF02515 CoA-transferase family III TSH58p_31935 PF01425 Amidase TSH58p_31945 PF07702 UTRA domain TSH58p_31945 PF00392 Bacterial regulatory proteins, gntR family TSH58p_31960 PF08240 Alcohol dehydrogenase GroES-like domain TSH58p_31960 PF00107 Zinc-binding dehydrogenase TSH58p_31975 PF00696 Amino acid kinase family TSH58p_31980 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain TSH58p_31980 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain TSH58p_31990 PF13520 Amino acid permease TSH58p_32000 PF13610 DDE domain TSH58p_32015 PF07732 Multicopper oxidase TSH58p_32020 PF00034 Cytochrome c TSH58p_32025 PF00115 Cytochrome C and Quinol oxidase polypeptide I TSH58p_32030 PF07728 AAA domain (dynein-related subfamily) TSH58p_32030 PF08406 CbbQ/NirQ/NorQ C-terminal TSH58p_32035 PF00092 von Willebrand factor type A domain TSH58p_32055 PF00175 Oxidoreductase NAD-binding domain TSH58p_32055 PF00042 Globin TSH58p_32055 PF00970 Oxidoreductase FAD-binding domain TSH58p_32065 PF00512 His Kinase A (phospho-acceptor) domain TSH58p_32065 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase TSH58p_32075 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase TSH58p_32075 PF00512 His Kinase A (phospho-acceptor) domain TSH58p_32075 PF00072 Response regulator receiver domain TSH58p_32075 PF09456 RcsC Alpha-Beta-Loop (ABL) TSH58p_32100 PF00239 Resolvase, N terminal domain TSH58p_32120 PF00872 Transposase, Mutator family TSH58p_32130 PF04166 Pyridoxal phosphate biosynthetic protein PdxA TSH58p_32135 PF00465 Iron-containing alcohol dehydrogenase TSH58p_32140 PF00701 Dihydrodipicolinate synthetase family TSH58p_32150 PF00005 ABC transporter TSH58p_32155 PF00528 Binding-protein-dependent transport system inner membrane component TSH58p_32175 PF13411 MerR HTH family regulatory protein TSH58p_32180 PF00403 Heavy-metal-associated domain TSH58p_32185 PF01252 Signal peptidase (SPase) II TSH58p_32190 PF00155 Aminotransferase class I and II TSH58p_32190 PF00392 Bacterial regulatory proteins, gntR family TSH58p_32195 PF00892 EamA-like transporter family TSH58p_32200 PF08448 PAS fold TSH58p_32200 PF00072 Response regulator receiver domain TSH58p_32200 PF13426 PAS domain TSH58p_32200 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase TSH58p_32200 PF00512 His Kinase A (phospho-acceptor) domain TSH58p_32205 PF00356 Bacterial regulatory proteins, lacI family TSH58p_32215 PF07702 UTRA domain TSH58p_32215 PF00392 Bacterial regulatory proteins, gntR family TSH58p_32225 PF02397 Bacterial sugar transferase TSH58p_32240 PF03808 Glycosyl transferase WecB/TagA/CpsF family TSH58p_32280 PF00356 Bacterial regulatory proteins, lacI family TSH58p_32285 PF18565 Glycoside hydrolase family 2 C-terminal domain 5 TSH58p_32285 PF00703 Glycosyl hydrolases family 2 TSH58p_32285 PF02836 Glycosyl hydrolases family 2, TIM barrel domain TSH58p_32285 PF02837 Glycosyl hydrolases family 2, sugar binding domain TSH58p_32290 PF03480 Bacterial extracellular solute-binding protein, family 7 TSH58p_32300 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component TSH58p_32305 PF13802 Galactose mutarotase-like TSH58p_32305 PF01055 Glycosyl hydrolases family 31 TSH58p_32305 PF16338 Domain of unknown function (DUF4968) TSH58p_32305 PF17137 Domain of unknown function (DUF5110) TSH58p_32310 PF03741 Integral membrane protein TerC family TSH58p_32315 PF01042 Endoribonuclease L-PSP TSH58p_32320 PF00497 Bacterial extracellular solute-binding proteins, family 3 TSH58p_32325 PF01042 Endoribonuclease L-PSP TSH58p_32330 PF01266 FAD dependent oxidoreductase TSH58p_32335 PF04324 BFD-like [2Fe-2S] binding domain TSH58p_32335 PF07992 Pyridine nucleotide-disulphide oxidoreductase TSH58p_32345 PF01266 FAD dependent oxidoreductase TSH58p_32350 PF00528 Binding-protein-dependent transport system inner membrane component TSH58p_32355 PF00528 Binding-protein-dependent transport system inner membrane component TSH58p_32360 PF00005 ABC transporter TSH58p_32360 PF08402 TOBE domain TSH58p_32370 PF03466 LysR substrate binding domain TSH58p_32370 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family TSH58p_32380 PF00528 Binding-protein-dependent transport system inner membrane component TSH58p_32390 PF00701 Dihydrodipicolinate synthetase family TSH58p_32395 PF01070 FMN-dependent dehydrogenase TSH58p_32400 PF02913 FAD linked oxidases, C-terminal domain TSH58p_32400 PF01565 FAD binding domain TSH58p_32405 PF07883 Cupin domain TSH58p_32405 PF01381 Helix-turn-helix TSH58p_32425 PF07715 TonB-dependent Receptor Plug Domain TSH58p_32425 PF00593 TonB dependent receptor TSH58p_32455 PF05853 beta-keto acid cleavage enzyme TSH58p_32460 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain TSH58p_32460 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain TSH58p_32465 PF00072 Response regulator receiver domain TSH58p_32465 PF00158 Sigma-54 interaction domain TSH58p_32465 PF02954 Bacterial regulatory protein, Fis family TSH58p_32470 PF00873 AcrB/AcrD/AcrF family TSH58p_32475 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion TSH58p_32480 PF00707 Translation initiation factor IF-3, C-terminal domain TSH58p_32480 PF05198 Translation initiation factor IF-3, N-terminal domain TSH58p_32485 PF01165 Ribosomal protein S21 TSH58p_32490 PF00313 'Cold-shock' DNA-binding domain TSH58p_32495 PF12282 Signal transduction histidine kinase TSH58p_32495 PF07568 Histidine kinase TSH58p_32495 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase TSH58p_32500 PF00072 Response regulator receiver domain TSH58p_32510 PF00005 ABC transporter TSH58p_32515 PF00005 ABC transporter TSH58p_32515 PF12399 Branched-chain amino acid ATP-binding cassette transporter TSH58p_32530 PF13458 Periplasmic binding protein TSH58p_32535 PF07690 Major Facilitator Superfamily TSH58p_32540 PF01408 Oxidoreductase family, NAD-binding Rossmann fold TSH58p_32545 PF02585 GlcNAc-PI de-N-acetylase TSH58p_32550 PF03737 Aldolase/RraA TSH58p_32555 PF04303 PrpF protein TSH58p_32560 PF04909 Amidohydrolase TSH58p_32570 PF02900 Catalytic LigB subunit of aromatic ring-opening dioxygenase TSH58p_32575 PF14759 Reductase C-terminal TSH58p_32575 PF07992 Pyridine nucleotide-disulphide oxidoreductase TSH58p_32580 PF00111 2Fe-2S iron-sulfur cluster binding domain TSH58p_32585 PF00067 Cytochrome P450 TSH58p_32600 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family TSH58p_32600 PF03466 LysR substrate binding domain TSH58p_32610 PF04542 Sigma-70 region 2 TSH58p_32610 PF08281 Sigma-70, region 4 TSH58p_32615 PF00593 TonB dependent receptor TSH58p_32615 PF07715 TonB-dependent Receptor Plug Domain TSH58p_32625 PF00664 ABC transporter transmembrane region TSH58p_32625 PF00005 ABC transporter TSH58p_32630 PF00593 TonB dependent receptor TSH58p_32630 PF07715 TonB-dependent Receptor Plug Domain TSH58p_32640 PF01032 FecCD transport family TSH58p_32645 PF08021 Siderophore-interacting FAD-binding domain TSH58p_32645 PF04954 Siderophore-interacting protein