locus-tag class description AL072_00005 PF07683 Cobalamin synthesis protein cobW C-terminal domain AL072_00005 PF02492 CobW/HypB/UreG, nucleotide-binding domain AL072_00015 PF04752 ChaC-like protein AL072_00030 PF00512 His Kinase A (phospho-acceptor) domain AL072_00030 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AL072_00040 PF00883 Cytosol aminopeptidase family, catalytic domain AL072_00040 PF02789 Cytosol aminopeptidase family, N-terminal domain AL072_00045 PF01029 NusB family AL072_00045 PF01189 16S rRNA methyltransferase RsmB/F AL072_00060 PF02527 rRNA small subunit methyltransferase G AL072_00060 PF00588 SpoU rRNA Methylase family AL072_00065 PF00512 His Kinase A (phospho-acceptor) domain AL072_00065 PF08446 PAS fold AL072_00065 PF01590 GAF domain AL072_00065 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AL072_00065 PF00360 Phytochrome region AL072_00070 PF02463 RecF/RecN/SMC N terminal domain AL072_00075 PF13525 Outer membrane lipoprotein AL072_00080 PF01207 Dihydrouridine synthase (Dus) AL072_00090 PF17768 RecJ OB domain AL072_00090 PF02272 DHHA1 domain AL072_00090 PF10141 Single-strand DNA-specific exonuclease, C terminal domain AL072_00090 PF01368 DHH family AL072_00095 PF04879 Molybdopterin oxidoreductase Fe4S4 domain AL072_00095 PF01568 Molydopterin dinucleotide binding domain AL072_00095 PF00384 Molybdopterin oxidoreductase AL072_00100 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component AL072_00105 PF04290 Tripartite ATP-independent periplasmic transporters, DctQ component AL072_00115 PF03480 Bacterial extracellular solute-binding protein, family 7 AL072_00120 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AL072_00120 PF00512 His Kinase A (phospho-acceptor) domain AL072_00120 PF00989 PAS fold AL072_00125 PF00196 Bacterial regulatory proteins, luxR family AL072_00125 PF00072 Response regulator receiver domain AL072_00130 PF00512 His Kinase A (phospho-acceptor) domain AL072_00130 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AL072_00140 PF05951 Bacterial protein of unknown function (DUF882) AL072_00155 PF01077 Nitrite and sulphite reductase 4Fe-4S domain AL072_00155 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain AL072_00165 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases AL072_00165 PF14824 Sirohaem biosynthesis protein central AL072_00165 PF10414 Sirohaem synthase dimerisation region AL072_00170 PF01507 Phosphoadenosine phosphosulfate reductase family AL072_00175 PF01507 Phosphoadenosine phosphosulfate reductase family AL072_00180 PF00009 Elongation factor Tu GTP binding domain AL072_00185 PF12848 ABC transporter AL072_00185 PF00005 ABC transporter AL072_00210 PF03060 Nitronate monooxygenase AL072_00215 PF00990 Diguanylate cyclase, GGDEF domain AL072_00255 PF02310 B12 binding domain AL072_00255 PF00809 Pterin binding enzyme AL072_00255 PF02965 Vitamin B12 dependent methionine synthase, activation domain AL072_00255 PF02574 Homocysteine S-methyltransferase AL072_00255 PF02607 B12 binding domain AL072_00270 PF02219 Methylenetetrahydrofolate reductase AL072_00275 PF03551 Transcriptional regulator PadR-like family AL072_00275 PF13847 Methyltransferase domain AL072_00280 PF04333 MlaA lipoprotein AL072_00310 PF12848 ABC transporter AL072_00310 PF00005 ABC transporter AL072_00315 PF02639 Uncharacterized BCR, YaiI/YqxD family COG1671 AL072_00320 PF02913 FAD linked oxidases, C-terminal domain AL072_00320 PF01565 FAD binding domain AL072_00325 PF01513 ATP-NAD kinase AL072_00330 PF00676 Dehydrogenase E1 component AL072_00335 PF02779 Transketolase, pyrimidine binding domain AL072_00335 PF02780 Transketolase, C-terminal domain AL072_00340 PF00561 alpha/beta hydrolase fold AL072_00340 PF00364 Biotin-requiring enzyme AL072_00350 PF00107 Zinc-binding dehydrogenase AL072_00350 PF08240 Alcohol dehydrogenase GroES-like domain AL072_00355 PF16881 N-terminal domain of lipoyl synthase of Radical_SAM family AL072_00355 PF04055 Radical SAM superfamily AL072_00365 PF00672 HAMP domain AL072_00365 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain AL072_00370 PF03969 AFG1-like ATPase AL072_00375 PF00512 His Kinase A (phospho-acceptor) domain AL072_00375 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AL072_00380 PF08543 Phosphomethylpyrimidine kinase AL072_00385 PF03328 HpcH/HpaI aldolase/citrate lyase family AL072_00395 PF00486 Transcriptional regulatory protein, C terminal AL072_00395 PF00072 Response regulator receiver domain AL072_00400 PF00180 Isocitrate/isopropylmalate dehydrogenase AL072_00405 PF00694 Aconitase C-terminal domain AL072_00430 PF01678 Diaminopimelate epimerase AL072_00435 PF04055 Radical SAM superfamily AL072_00435 PF00919 Uncharacterized protein family UPF0004 AL072_00440 PF00448 SRP54-type protein, GTPase domain AL072_00440 PF02881 SRP54-type protein, helical bundle domain AL072_00445 PF10423 Bacterial AMP nucleoside phosphorylase N-terminus AL072_00445 PF01048 Phosphorylase superfamily AL072_00450 PF02525 Flavodoxin-like fold AL072_00455 PF13230 Glutamine amidotransferases class-II AL072_00460 PF03960 ArsC family AL072_00465 PF03747 ADP-ribosylglycohydrolase AL072_00470 PF07357 Dinitrogenase reductase ADP-ribosyltransferase (DRAT) AL072_00480 PF00142 4Fe-4S iron sulfur cluster binding proteins, NifH/frxC family AL072_00485 PF00148 Nitrogenase component 1 type Oxidoreductase AL072_00490 PF11844 Domain of unknown function (DUF3364) AL072_00490 PF00148 Nitrogenase component 1 type Oxidoreductase AL072_00495 PF13426 PAS domain AL072_00495 PF08447 PAS fold AL072_00495 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain AL072_00505 PF04324 BFD-like [2Fe-2S] binding domain AL072_00505 PF00148 Nitrogenase component 1 type Oxidoreductase AL072_00510 PF00148 Nitrogenase component 1 type Oxidoreductase AL072_00515 PF02579 Dinitrogenase iron-molybdenum cofactor AL072_00520 PF03270 Protein of unknown function, DUF269 AL072_00525 PF05082 Rop-like AL072_00540 PF04452 RNA methyltransferase AL072_00550 PF01040 UbiA prenyltransferase family AL072_00565 PF03167 Uracil DNA glycosylase superfamily AL072_00570 PF01329 Pterin 4 alpha carbinolamine dehydratase AL072_00575 PF13378 Enolase C-terminal domain-like AL072_00575 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain AL072_00580 PF17200 Single Cache domain 2 AL072_00580 PF00672 HAMP domain AL072_00580 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain AL072_00585 PF05227 CHASE3 domain AL072_00585 PF00672 HAMP domain AL072_00585 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain AL072_00600 PF03776 Septum formation topological specificity factor MinE AL072_00605 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain AL072_00610 PF03775 Septum formation inhibitor MinC, C-terminal domain AL072_00610 PF05209 Septum formation inhibitor MinC, N-terminal domain AL072_00615 PF02562 PhoH-like protein AL072_00620 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain AL072_00620 PF17200 Single Cache domain 2 AL072_00620 PF00672 HAMP domain AL072_00625 PF02630 SCO1/SenC AL072_00635 PF00119 ATP synthase A chain AL072_00640 PF00137 ATP synthase subunit C AL072_00645 PF00430 ATP synthase B/B' CF(0) AL072_00650 PF00430 ATP synthase B/B' CF(0) AL072_00655 PF02900 Catalytic LigB subunit of aromatic ring-opening dioxygenase AL072_00660 PF00512 His Kinase A (phospho-acceptor) domain AL072_00660 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AL072_00660 PF09308 LuxQ, periplasmic AL072_00660 PF00072 Response regulator receiver domain AL072_00665 PF00596 Class II Aldolase and Adducin N-terminal domain AL072_00690 PF13247 4Fe-4S dicluster domain AL072_00695 PF04879 Molybdopterin oxidoreductase Fe4S4 domain AL072_00695 PF00384 Molybdopterin oxidoreductase AL072_00695 PF01568 Molydopterin dinucleotide binding domain AL072_00720 PF12804 MobA-like NTP transferase domain AL072_00725 PF02634 FdhD/NarQ family AL072_00730 PF00528 Binding-protein-dependent transport system inner membrane component AL072_00735 PF12849 PBP superfamily domain AL072_00745 PF06463 Molybdenum Cofactor Synthesis C AL072_00745 PF04055 Radical SAM superfamily AL072_00750 PF02515 CoA-transferase family III AL072_00765 PF00669 Bacterial flagellin N-terminal helical region AL072_00765 PF00700 Bacterial flagellin C-terminal helical region AL072_00780 PF00672 HAMP domain AL072_00780 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain AL072_00780 PF17200 Single Cache domain 2 AL072_00785 PF00156 Phosphoribosyl transferase domain AL072_00810 PF00133 tRNA synthetases class I (I, L, M and V) AL072_00810 PF08264 Anticodon-binding domain of tRNA AL072_00815 PF01252 Signal peptidase (SPase) II AL072_00825 PF05193 Peptidase M16 inactive domain AL072_00825 PF00675 Insulinase (Peptidase family M16) AL072_00830 PF05193 Peptidase M16 inactive domain AL072_00835 PF00342 Phosphoglucose isomerase AL072_00845 PF03466 LysR substrate binding domain AL072_00845 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AL072_00850 PF00871 Acetokinase family AL072_00855 PF01515 Phosphate acetyl/butaryl transferase AL072_00860 PF00512 His Kinase A (phospho-acceptor) domain AL072_00860 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AL072_00865 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AL072_00865 PF00512 His Kinase A (phospho-acceptor) domain AL072_00870 PF00989 PAS fold AL072_00870 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AL072_00870 PF00512 His Kinase A (phospho-acceptor) domain AL072_00880 PF00512 His Kinase A (phospho-acceptor) domain AL072_00880 PF01627 Hpt domain AL072_00880 PF17149 Periplasmic sensor domain found in signal transduction proteins AL072_00880 PF00672 HAMP domain AL072_00880 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AL072_00880 PF00072 Response regulator receiver domain AL072_00885 PF07943 Penicillin-binding protein 5, C-terminal domain AL072_00885 PF00768 D-alanyl-D-alanine carboxypeptidase AL072_00910 PF02617 ATP-dependent Clp protease adaptor protein ClpS AL072_00915 PF00004 ATPase family associated with various cellular activities (AAA) AL072_00915 PF07724 AAA domain (Cdc48 subfamily) AL072_00915 PF17871 AAA lid domain AL072_00915 PF02861 Clp amino terminal domain, pathogenicity island component AL072_00915 PF10431 C-terminal, D2-small domain, of ClpB protein AL072_00920 PF01513 ATP-NAD kinase AL072_00925 PF00486 Transcriptional regulatory protein, C terminal AL072_00925 PF00072 Response regulator receiver domain AL072_00935 PF01740 STAS domain AL072_00940 PF00512 His Kinase A (phospho-acceptor) domain AL072_00940 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AL072_00965 PF03186 CobD/Cbib protein AL072_00980 PF01435 Peptidase family M48 AL072_00985 PF07896 Protein of unknown function (DUF1674) AL072_00990 PF00005 ABC transporter AL072_00990 PF08402 TOBE domain AL072_00995 PF00528 Binding-protein-dependent transport system inner membrane component AL072_01000 PF00528 Binding-protein-dependent transport system inner membrane component AL072_01005 PF13416 Bacterial extracellular solute-binding protein AL072_01010 PF00512 His Kinase A (phospho-acceptor) domain AL072_01010 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AL072_01020 PF00563 EAL domain AL072_01020 PF03707 Bacterial signalling protein N terminal repeat AL072_01020 PF00990 Diguanylate cyclase, GGDEF domain AL072_01025 PF10397 Adenylosuccinate lyase C-terminus AL072_01025 PF00206 Lyase AL072_01035 PF00462 Glutaredoxin AL072_01050 PF00892 EamA-like transporter family AL072_01060 PF00724 NADH:flavin oxidoreductase / NADH oxidase family AL072_01070 PF01521 Iron-sulphur cluster biosynthesis AL072_01075 PF01106 NifU-like domain AL072_01075 PF04324 BFD-like [2Fe-2S] binding domain AL072_01075 PF01592 NifU-like N terminal domain AL072_01080 PF00266 Aminotransferase class-V AL072_01085 PF00682 HMGL-like AL072_01090 PF00132 Bacterial transferase hexapeptide (six repeats) AL072_01095 PF03206 Nitrogen fixation protein NifW AL072_01105 PF00158 Sigma-54 interaction domain AL072_01105 PF00072 Response regulator receiver domain AL072_01105 PF02954 Bacterial regulatory protein, Fis family AL072_01120 PF00766 Electron transfer flavoprotein FAD-binding domain AL072_01120 PF01012 Electron transfer flavoprotein domain AL072_01125 PF01012 Electron transfer flavoprotein domain AL072_01130 PF00072 Response regulator receiver domain AL072_01130 PF00512 His Kinase A (phospho-acceptor) domain AL072_01130 PF00672 HAMP domain AL072_01130 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AL072_01130 PF01627 Hpt domain AL072_01130 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) AL072_01140 PF01810 LysE type translocator AL072_01150 PF02606 Tetraacyldisaccharide-1-P 4'-kinase AL072_01155 PF04413 3-Deoxy-D-manno-octulosonic-acid transferase (kdotransferase) AL072_01170 PF01810 LysE type translocator AL072_01180 PF13439 Glycosyltransferase Family 4 AL072_01180 PF00534 Glycosyl transferases group 1 AL072_01190 PF00781 Diacylglycerol kinase catalytic domain AL072_01195 PF06029 AlkA N-terminal domain AL072_01195 PF00730 HhH-GPD superfamily base excision DNA repair protein AL072_01195 PF12833 Helix-turn-helix domain AL072_01195 PF02805 Metal binding domain of Ada AL072_01200 PF02700 Phosphoribosylformylglycinamidine (FGAM) synthase AL072_01205 PF01259 SAICAR synthetase AL072_01235 PF01594 AI-2E family transporter AL072_01245 PF12146 Serine aminopeptidase, S33 AL072_01250 PF05036 Sporulation related domain AL072_01250 PF03330 Lytic transglycolase AL072_01255 PF01575 MaoC like domain AL072_01260 PF01687 Riboflavin kinase AL072_01260 PF06574 FAD synthetase AL072_01265 PF07690 Major Facilitator Superfamily AL072_01270 PF02308 MgtC family AL072_01275 PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain AL072_01275 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain AL072_01305 PF01970 Tripartite tricarboxylate transporter TctA family AL072_01320 PF06508 Queuosine biosynthesis protein QueC AL072_01325 PF00989 PAS fold AL072_01325 PF13188 PAS domain AL072_01325 PF00512 His Kinase A (phospho-acceptor) domain AL072_01325 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AL072_01330 PF00364 Biotin-requiring enzyme AL072_01330 PF00561 alpha/beta hydrolase fold AL072_01335 PF01053 Cys/Met metabolism PLP-dependent enzyme AL072_01345 PF04107 Glutamate-cysteine ligase family 2(GCS2) AL072_01370 PF05191 Adenylate kinase, active site lid AL072_01375 PF00344 SecY translocase AL072_01380 PF00828 Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27A AL072_01385 PF00327 Ribosomal protein L30p/L7e AL072_01390 PF03719 Ribosomal protein S5, C-terminal domain AL072_01390 PF00333 Ribosomal protein S5, N-terminal domain AL072_01395 PF00861 Ribosomal L18 of archaea, bacteria, mitoch. and chloroplast AL072_01400 PF00347 Ribosomal protein L6 AL072_01405 PF00410 Ribosomal protein S8 AL072_01410 PF00253 Ribosomal protein S14p/S29e AL072_01415 PF00673 ribosomal L5P family C-terminus AL072_01415 PF00281 Ribosomal protein L5 AL072_01420 PF17136 Ribosomal proteins 50S L24/mitochondrial 39S L24 AL072_01420 PF00467 KOW motif AL072_01425 PF00238 Ribosomal protein L14p/L23e AL072_01430 PF00366 Ribosomal protein S17 AL072_01435 PF00831 Ribosomal L29 protein AL072_01440 PF00252 Ribosomal protein L16p/L10e AL072_01445 PF00189 Ribosomal protein S3, C-terminal domain AL072_01445 PF07650 KH domain AL072_01450 PF00237 Ribosomal protein L22p/L17e AL072_01455 PF00203 Ribosomal protein S19 AL072_01460 PF00181 Ribosomal Proteins L2, RNA binding domain AL072_01460 PF03947 Ribosomal Proteins L2, C-terminal domain AL072_01465 PF00276 Ribosomal protein L23 AL072_01470 PF00573 Ribosomal protein L4/L1 family AL072_01475 PF00297 Ribosomal protein L3 AL072_01480 PF00338 Ribosomal protein S10p/S20e AL072_01485 PF03144 Elongation factor Tu domain 2 AL072_01485 PF00009 Elongation factor Tu GTP binding domain AL072_01485 PF03143 Elongation factor Tu C-terminal domain AL072_01490 PF00679 Elongation factor G C-terminus AL072_01490 PF03144 Elongation factor Tu domain 2 AL072_01490 PF00009 Elongation factor Tu GTP binding domain AL072_01490 PF03764 Elongation factor G, domain IV AL072_01490 PF14492 Elongation Factor G, domain II AL072_01495 PF00177 Ribosomal protein S7p/S5e AL072_01500 PF00164 Ribosomal protein S12/S23 AL072_01505 PF05000 RNA polymerase Rpb1, domain 4 AL072_01505 PF04983 RNA polymerase Rpb1, domain 3 AL072_01505 PF00623 RNA polymerase Rpb1, domain 2 AL072_01505 PF04998 RNA polymerase Rpb1, domain 5 AL072_01505 PF04997 RNA polymerase Rpb1, domain 1 AL072_01510 PF04563 RNA polymerase beta subunit AL072_01510 PF04561 RNA polymerase Rpb2, domain 2 AL072_01510 PF04560 RNA polymerase Rpb2, domain 7 AL072_01510 PF00562 RNA polymerase Rpb2, domain 6 AL072_01510 PF10385 RNA polymerase beta subunit external 1 domain AL072_01510 PF04565 RNA polymerase Rpb2, domain 3 AL072_01515 PF16320 Ribosomal protein L7/L12 dimerisation domain AL072_01515 PF00542 Ribosomal protein L7/L12 C-terminal domain AL072_01520 PF00466 Ribosomal protein L10 AL072_01525 PF00687 Ribosomal protein L1p/L10e family AL072_01530 PF03946 Ribosomal protein L11, N-terminal domain AL072_01530 PF00298 Ribosomal protein L11, RNA binding domain AL072_01535 PF02357 Transcription termination factor nusG AL072_01535 PF00467 KOW motif AL072_01550 PF03144 Elongation factor Tu domain 2 AL072_01550 PF00009 Elongation factor Tu GTP binding domain AL072_01550 PF03143 Elongation factor Tu C-terminal domain AL072_01565 PF08032 RNA 2'-O ribose methyltransferase substrate binding AL072_01565 PF00588 SpoU rRNA Methylase family AL072_01600 PF13458 Periplasmic binding protein AL072_01610 PF12399 Branched-chain amino acid ATP-binding cassette transporter AL072_01610 PF00005 ABC transporter AL072_01615 PF00005 ABC transporter AL072_01630 PF00005 ABC transporter AL072_01640 PF00528 Binding-protein-dependent transport system inner membrane component AL072_01645 PF00528 Binding-protein-dependent transport system inner membrane component AL072_01650 PF00005 ABC transporter AL072_01680 PF00480 ROK family AL072_01690 PF02358 Trehalose-phosphatase AL072_01705 PF03462 PCRF domain AL072_01705 PF00472 RF-1 domain AL072_01710 PF03062 MBOAT, membrane-bound O-acyltransferase family AL072_01720 PF00905 Penicillin binding protein transpeptidase domain AL072_01720 PF00912 Transglycosylase AL072_01720 PF17092 Penicillin-binding protein OB-like domain AL072_01725 PF11741 AMIN domain AL072_01725 PF01520 N-acetylmuramoyl-L-alanine amidase AL072_01730 PF00575 S1 RNA binding domain AL072_01730 PF12111 Polyribonucleotide phosphorylase C terminal AL072_01730 PF10150 Ribonuclease E/G family AL072_01735 PF01272 Transcription elongation factor, GreA/GreB, C-term AL072_01735 PF03449 Transcription elongation factor, N-terminal AL072_01740 PF01964 Radical SAM ThiC family AL072_01740 PF13667 ThiC-associated domain AL072_01745 PF01544 CorA-like Mg2+ transporter protein AL072_01755 PF00696 Amino acid kinase family AL072_01765 PF01926 50S ribosome-binding GTPase AL072_01770 PF02096 60Kd inner membrane protein AL072_01770 PF14849 YidC periplasmic domain AL072_01775 PF01809 Putative membrane protein insertion efficiency factor AL072_01780 PF00825 Ribonuclease P AL072_01785 PF00468 Ribosomal protein L34 AL072_01790 PF01245 Ribosomal protein L19 AL072_01795 PF01746 tRNA (Guanine-1)-methyltransferase AL072_01800 PF05239 PRC-barrel domain AL072_01800 PF01782 RimM N-terminal domain AL072_01805 PF00886 Ribosomal protein S16 AL072_01810 PF00448 SRP54-type protein, GTPase domain AL072_01810 PF02881 SRP54-type protein, helical bundle domain AL072_01810 PF02978 Signal peptide binding domain AL072_01835 PF03707 Bacterial signalling protein N terminal repeat AL072_01835 PF00990 Diguanylate cyclase, GGDEF domain AL072_01835 PF00563 EAL domain AL072_01845 PF14602 Hexapeptide repeat of succinyl-transferase AL072_01845 PF14805 Tetrahydrodipicolinate N-succinyltransferase N-terminal AL072_01845 PF00132 Bacterial transferase hexapeptide (six repeats) AL072_01850 PF01546 Peptidase family M20/M25/M40 AL072_01850 PF07687 Peptidase dimerisation domain AL072_01860 PF02277 Phosphoribosyltransferase AL072_01870 PF02770 Acyl-CoA dehydrogenase, middle domain AL072_01870 PF12806 Acetyl-CoA dehydrogenase C-terminal like AL072_01870 PF00441 Acyl-CoA dehydrogenase, C-terminal domain AL072_01870 PF02771 Acyl-CoA dehydrogenase, N-terminal domain AL072_01880 PF00465 Iron-containing alcohol dehydrogenase AL072_01895 PF01066 CDP-alcohol phosphatidyltransferase AL072_01900 PF13183 4Fe-4S dicluster domain AL072_01900 PF02754 Cysteine-rich domain AL072_01905 PF01565 FAD binding domain AL072_01910 PF02913 FAD linked oxidases, C-terminal domain AL072_01910 PF01565 FAD binding domain AL072_01915 PF00444 Ribosomal protein L36 AL072_01930 PF03737 Aldolase/RraA AL072_01935 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain AL072_01935 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain AL072_01940 PF00486 Transcriptional regulatory protein, C terminal AL072_01940 PF00072 Response regulator receiver domain AL072_01955 PF04002 RadC-like JAB domain AL072_01960 PF05951 Bacterial protein of unknown function (DUF882) AL072_01965 PF00579 tRNA synthetases class I (W and Y) AL072_01975 PF00294 pfkB family carbohydrate kinase AL072_01975 PF01467 Cytidylyltransferase-like AL072_01985 PF00512 His Kinase A (phospho-acceptor) domain AL072_01985 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AL072_01995 PF13847 Methyltransferase domain AL072_02010 PF00162 Phosphoglycerate kinase AL072_02015 PF12170 DNA polymerase III tau subunit V interacting with alpha AL072_02015 PF12168 DNA polymerase III subunits tau domain IV DnaB-binding AL072_02015 PF12169 DNA polymerase III subunits gamma and tau domain III AL072_02020 PF02575 YbaB/EbfC DNA-binding family AL072_02025 PF13662 Toprim domain AL072_02025 PF02132 RecR protein AL072_02030 PF00749 tRNA synthetases class I (E and Q), catalytic domain AL072_02040 PF03232 Ubiquinone biosynthesis protein COQ7 AL072_02045 PF02600 Disulfide bond formation protein DsbB AL072_02060 PF00115 Cytochrome C and Quinol oxidase polypeptide I AL072_02070 PF13442 Cytochrome C oxidase, cbb3-type, subunit III AL072_02085 PF00581 Rhodanese-like domain AL072_02090 PF01022 Bacterial regulatory protein, arsR family AL072_02100 PF02627 Carboxymuconolactone decarboxylase family AL072_02210 PF02464 Competence-damaged protein AL072_02210 PF00994 Probable molybdopterin binding domain AL072_02215 PF17746 SfsA N-terminal OB domain AL072_02215 PF03749 Sugar fermentation stimulation protein RE domain AL072_02220 PF00557 Metallopeptidase family M24 AL072_02240 PF00570 HRDC domain AL072_02240 PF09382 RQC domain AL072_02240 PF00271 Helicase conserved C-terminal domain AL072_02240 PF00270 DEAD/DEAH box helicase AL072_02240 PF16124 RecQ zinc-binding AL072_02245 PF00293 NUDIX domain AL072_02250 PF01960 ArgJ family AL072_02260 PF07517 SecA DEAD-like domain AL072_02260 PF02810 SEC-C motif AL072_02260 PF01043 SecA preprotein cross-linking domain AL072_02260 PF07516 SecA Wing and Scaffold domain AL072_02275 PF00563 EAL domain AL072_02275 PF00990 Diguanylate cyclase, GGDEF domain AL072_02275 PF03707 Bacterial signalling protein N terminal repeat AL072_02285 PF01022 Bacterial regulatory protein, arsR family AL072_02290 PF00893 Small Multidrug Resistance protein AL072_02295 PF01921 tRNA synthetases class I (K) AL072_02315 PF00056 lactate/malate dehydrogenase, NAD binding domain AL072_02315 PF02866 lactate/malate dehydrogenase, alpha/beta C-terminal domain AL072_02320 PF08442 ATP-grasp domain AL072_02320 PF00549 CoA-ligase AL072_02325 PF02629 CoA binding domain AL072_02325 PF00549 CoA-ligase AL072_02330 PF02779 Transketolase, pyrimidine binding domain AL072_02330 PF16870 2-oxoglutarate dehydrogenase C-terminal AL072_02330 PF16078 2-oxoglutarate dehydrogenase N-terminus AL072_02330 PF00676 Dehydrogenase E1 component AL072_02335 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) AL072_02335 PF00364 Biotin-requiring enzyme AL072_02335 PF02817 e3 binding domain AL072_02350 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AL072_02350 PF00989 PAS fold AL072_02350 PF00512 His Kinase A (phospho-acceptor) domain AL072_02355 PF02515 CoA-transferase family III AL072_02385 PF00270 DEAD/DEAH box helicase AL072_02385 PF08482 ATP-dependent helicase C-terminal AL072_02385 PF04408 Helicase associated domain (HA2) AL072_02385 PF00271 Helicase conserved C-terminal domain AL072_02390 PF01326 Pyruvate phosphate dikinase, PEP/pyruvate binding domain AL072_02390 PF00391 PEP-utilising enzyme, mobile domain AL072_02390 PF02896 PEP-utilising enzyme, TIM barrel domain AL072_02395 PF03707 Bacterial signalling protein N terminal repeat AL072_02395 PF00563 EAL domain AL072_02395 PF00990 Diguanylate cyclase, GGDEF domain AL072_02400 PF08471 Class II vitamin B12-dependent ribonucleotide reductase AL072_02400 PF02867 Ribonucleotide reductase, barrel domain AL072_02410 PF00575 S1 RNA binding domain AL072_02415 PF02224 Cytidylate kinase AL072_02420 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) AL072_02515 PF13005 zinc-finger binding domain of transposase IS66 AL072_02515 PF03050 Transposase IS66 family AL072_02515 PF13817 IS66 C-terminal element AL072_02515 PF13007 Transposase C of IS166 homeodomain AL072_02525 PF13817 IS66 C-terminal element AL072_02525 PF03050 Transposase IS66 family AL072_02525 PF13005 zinc-finger binding domain of transposase IS66 AL072_02525 PF13007 Transposase C of IS166 homeodomain AL072_02530 PF05717 IS66 Orf2 like protein AL072_02535 PF01695 IstB-like ATP binding protein AL072_02540 PF00665 Integrase core domain AL072_02540 PF02796 Helix-turn-helix domain of resolvase AL072_02555 PF05717 IS66 Orf2 like protein AL072_02585 PF13086 AAA domain AL072_02585 PF13087 AAA domain AL072_02585 PF13195 Protein of unknown function (DUF4011) AL072_02590 PF02384 N-6 DNA Methylase AL072_02605 PF02661 Fic/DOC family AL072_02605 PF13784 Fic/DOC family N-terminal AL072_02660 PF09378 HAS barrel domain AL072_02660 PF01935 Helicase HerA, central domain AL072_02685 PF00982 Glycosyltransferase family 20 AL072_02690 PF02685 Glucokinase AL072_02695 PF03459 TOBE domain AL072_02695 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AL072_02700 PF01757 Acyltransferase family AL072_02710 PF09335 SNARE associated Golgi protein AL072_02715 PF00588 SpoU rRNA Methylase family AL072_02715 PF08032 RNA 2'-O ribose methyltransferase substrate binding AL072_02725 PF01625 Peptide methionine sulfoxide reductase AL072_02735 PF01580 FtsK/SpoIIIE family AL072_02735 PF09397 Ftsk gamma domain AL072_02735 PF17854 FtsK alpha domain AL072_02735 PF13491 4TM region of DNA translocase FtsK/SpoIIIE AL072_02740 PF05163 DinB family AL072_02750 PF00512 His Kinase A (phospho-acceptor) domain AL072_02750 PF02702 Osmosensitive K+ channel His kinase sensor domain AL072_02750 PF13493 Domain of unknown function (DUF4118) AL072_02750 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AL072_02760 PF02308 MgtC family AL072_02775 PF04879 Molybdopterin oxidoreductase Fe4S4 domain AL072_02775 PF00384 Molybdopterin oxidoreductase AL072_02775 PF01568 Molydopterin dinucleotide binding domain AL072_02780 PF03892 Nitrate reductase cytochrome c-type subunit (NapB) AL072_02785 PF03264 NapC/NirT cytochrome c family, N-terminal region AL072_02790 PF00672 HAMP domain AL072_02790 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain AL072_02790 PF17200 Single Cache domain 2 AL072_02805 PF02142 MGS-like domain AL072_02805 PF02787 Carbamoyl-phosphate synthetase large chain, oligomerisation domain AL072_02805 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain AL072_02810 PF03449 Transcription elongation factor, N-terminal AL072_02810 PF01272 Transcription elongation factor, GreA/GreB, C-term AL072_02820 PF01037 Lrp/AsnC ligand binding domain AL072_02825 PF06258 Mitochondrial fission ELM1 AL072_02840 PF01068 ATP dependent DNA ligase domain AL072_02840 PF04675 DNA ligase N terminus AL072_02840 PF04679 ATP dependent DNA ligase C terminal region AL072_02850 PF04227 Indigoidine synthase A like protein AL072_02860 PF00563 EAL domain AL072_02860 PF00990 Diguanylate cyclase, GGDEF domain AL072_02860 PF03707 Bacterial signalling protein N terminal repeat AL072_02865 PF00199 Catalase AL072_02875 PF02678 Pirin AL072_02875 PF05726 Pirin C-terminal cupin domain AL072_02880 PF00909 Ammonium Transporter Family AL072_02885 PF00483 Nucleotidyl transferase AL072_02890 PF08323 Starch synthase catalytic domain AL072_02890 PF00534 Glycosyl transferases group 1 AL072_02900 PF00009 Elongation factor Tu GTP binding domain AL072_02900 PF00679 Elongation factor G C-terminus AL072_02900 PF03144 Elongation factor Tu domain 2 AL072_02900 PF06421 GTP-binding protein LepA C-terminus AL072_02915 PF00710 Asparaginase, N-terminal AL072_02915 PF17763 Glutaminase/Asparaginase C-terminal domain AL072_02925 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AL072_02925 PF03466 LysR substrate binding domain AL072_02935 PF11849 Domain of unknown function (DUF3369) AL072_02945 PF03484 tRNA synthetase B5 domain AL072_02945 PF01588 Putative tRNA binding domain AL072_02945 PF03483 B3/4 domain AL072_02945 PF17759 Phenylalanyl tRNA synthetase beta chain CLM domain AL072_02945 PF03147 Ferredoxin-fold anticodon binding domain AL072_02950 PF01409 tRNA synthetases class II core domain (F) AL072_02950 PF02912 Aminoacyl tRNA synthetase class II, N-terminal domain AL072_02955 PF00453 Ribosomal protein L20 AL072_02960 PF01632 Ribosomal protein L35 AL072_02965 PF01209 ubiE/COQ5 methyltransferase family AL072_02970 PF03109 ABC1 family AL072_02975 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain AL072_02980 PF00849 RNA pseudouridylate synthase AL072_02985 PF02770 Acyl-CoA dehydrogenase, middle domain AL072_02985 PF12806 Acetyl-CoA dehydrogenase C-terminal like AL072_02985 PF00441 Acyl-CoA dehydrogenase, C-terminal domain AL072_02985 PF02771 Acyl-CoA dehydrogenase, N-terminal domain AL072_02990 PF00766 Electron transfer flavoprotein FAD-binding domain AL072_02990 PF01012 Electron transfer flavoprotein domain AL072_02995 PF01012 Electron transfer flavoprotein domain AL072_03000 PF13193 AMP-binding enzyme C-terminal domain AL072_03000 PF00501 AMP-binding enzyme AL072_03005 PF00072 Response regulator receiver domain AL072_03005 PF00486 Transcriptional regulatory protein, C terminal AL072_03010 PF08448 PAS fold AL072_03010 PF13188 PAS domain AL072_03010 PF00512 His Kinase A (phospho-acceptor) domain AL072_03010 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AL072_03010 PF00072 Response regulator receiver domain AL072_03015 PF04341 Protein of unknown function, DUF485 AL072_03020 PF00474 Sodium:solute symporter family AL072_03030 PF00989 PAS fold AL072_03030 PF00512 His Kinase A (phospho-acceptor) domain AL072_03030 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AL072_03050 PF02754 Cysteine-rich domain AL072_03055 PF02915 Rubrerythrin AL072_03075 PF04055 Radical SAM superfamily AL072_03075 PF12544 Lysine-2,3-aminomutase AL072_03095 PF08264 Anticodon-binding domain of tRNA AL072_03095 PF00133 tRNA synthetases class I (I, L, M and V) AL072_03095 PF13603 Leucyl-tRNA synthetase, Domain 2 AL072_03100 PF12100 Domain of unknown function (DUF3576) AL072_03105 PF13609 Gram-negative porin AL072_03125 PF01168 Alanine racemase, N-terminal domain AL072_03140 PF00925 GTP cyclohydrolase II AL072_03150 PF00486 Transcriptional regulatory protein, C terminal AL072_03150 PF00072 Response regulator receiver domain AL072_03160 PF12706 Beta-lactamase superfamily domain AL072_03170 PF00300 Histidine phosphatase superfamily (branch 1) AL072_03180 PF01557 Fumarylacetoacetate (FAA) hydrolase family AL072_03185 PF12802 MarR family AL072_03205 PF14338 Mrr N-terminal domain AL072_03205 PF04471 Restriction endonuclease AL072_03220 PF00239 Resolvase, N terminal domain AL072_03220 PF02796 Helix-turn-helix domain of resolvase AL072_03235 PF15731 Antitoxin component of bacterial toxin-antitoxin system, MqsA AL072_03255 PF14579 Helix-hairpin-helix motif AL072_03255 PF02811 PHP domain AL072_03255 PF01336 OB-fold nucleic acid binding domain AL072_03255 PF17657 Bacterial DNA polymerase III alpha subunit finger domain AL072_03255 PF07733 Bacterial DNA polymerase III alpha NTPase domain AL072_03265 PF13538 UvrD-like helicase C-terminal domain AL072_03265 PF14490 Helix-hairpin-helix containing domain AL072_03265 PF18335 ATP-dependent RecD-like DNA helicase SH3 domain AL072_03365 PF00239 Resolvase, N terminal domain AL072_03365 PF02796 Helix-turn-helix domain of resolvase AL072_03430 PF11867 Domain of unknown function (DUF3387) AL072_03430 PF04313 Type I restriction enzyme R protein N terminus (HSDR_N) AL072_03430 PF18766 SWI2/SNF2 ATPase AL072_03440 PF14338 Mrr N-terminal domain AL072_03440 PF04471 Restriction endonuclease AL072_03455 PF02325 YGGT family AL072_03460 PF02594 Uncharacterised ACR, YggU family COG1872 AL072_03465 PF00763 Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain AL072_03465 PF02882 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain AL072_03470 PF01544 CorA-like Mg2+ transporter protein AL072_03475 PF02749 Quinolinate phosphoribosyl transferase, N-terminal domain AL072_03475 PF01729 Quinolinate phosphoribosyl transferase, C-terminal domain AL072_03480 PF13607 Succinyl-CoA ligase like flavodoxin domain AL072_03480 PF13380 CoA binding domain AL072_03480 PF00583 Acetyltransferase (GNAT) family AL072_03485 PF00056 lactate/malate dehydrogenase, NAD binding domain AL072_03485 PF02866 lactate/malate dehydrogenase, alpha/beta C-terminal domain AL072_03490 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AL072_03490 PF03466 LysR substrate binding domain AL072_03500 PF00719 Inorganic pyrophosphatase AL072_03505 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle AL072_03510 PF01329 Pterin 4 alpha carbinolamine dehydratase AL072_03520 PF03167 Uracil DNA glycosylase superfamily AL072_03525 PF02146 Sir2 family AL072_03530 PF01451 Low molecular weight phosphotyrosine protein phosphatase AL072_03535 PF07885 Ion channel AL072_03535 PF00027 Cyclic nucleotide-binding domain AL072_03550 PF14841 FliG middle domain AL072_03550 PF14842 FliG N-terminal domain AL072_03550 PF01706 FliG C-terminal domain AL072_03555 PF00883 Cytosol aminopeptidase family, catalytic domain AL072_03555 PF02789 Cytosol aminopeptidase family, N-terminal domain AL072_03565 PF01042 Endoribonuclease L-PSP AL072_03570 PF00440 Bacterial regulatory proteins, tetR family AL072_03575 PF00310 Glutamine amidotransferases class-II AL072_03575 PF01645 Conserved region in glutamate synthase AL072_03575 PF04898 Glutamate synthase central domain AL072_03575 PF01493 GXGXG motif AL072_03580 PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster AL072_03580 PF07992 Pyridine nucleotide-disulphide oxidoreductase AL072_03585 PF02673 Bacitracin resistance protein BacA AL072_03590 PF07690 Major Facilitator Superfamily AL072_03595 PF04321 RmlD substrate binding domain AL072_03605 PF00570 HRDC domain AL072_03605 PF01612 3'-5' exonuclease AL072_03610 PF01380 SIS domain AL072_03610 PF00571 CBS domain AL072_03625 PF00005 ABC transporter AL072_03630 PF04963 Sigma-54 factor, core binding domain AL072_03630 PF04552 Sigma-54, DNA binding domain AL072_03630 PF00309 Sigma-54 factor, Activator interacting domain (AID) AL072_03635 PF16321 Sigma 54 modulation/S30EA ribosomal protein C terminus AL072_03635 PF02482 Sigma 54 modulation protein / S30EA ribosomal protein AL072_03640 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 AL072_03645 PF05685 Putative restriction endonuclease AL072_03660 PF01842 ACT domain AL072_03660 PF00696 Amino acid kinase family AL072_03660 PF13840 ACT domain AL072_03665 PF03060 Nitronate monooxygenase AL072_03670 PF02896 PEP-utilising enzyme, TIM barrel domain AL072_03670 PF01590 GAF domain AL072_03670 PF05524 PEP-utilising enzyme, N-terminal AL072_03670 PF00391 PEP-utilising enzyme, mobile domain AL072_03685 PF04551 GcpE protein AL072_03690 PF01488 Shikimate / quinate 5-dehydrogenase AL072_03690 PF05201 Glutamyl-tRNAGlu reductase, N-terminal domain AL072_03690 PF00745 Glutamyl-tRNAGlu reductase, dimerisation domain AL072_03695 PF03462 PCRF domain AL072_03695 PF00472 RF-1 domain AL072_03700 PF04480 Protein of unknown function (DUF559) AL072_03705 PF17827 PrmC N-terminal domain AL072_03705 PF13847 Methyltransferase domain AL072_03720 PF00293 NUDIX domain AL072_03725 PF17871 AAA lid domain AL072_03725 PF07724 AAA domain (Cdc48 subfamily) AL072_03725 PF10431 C-terminal, D2-small domain, of ClpB protein AL072_03725 PF02861 Clp amino terminal domain, pathogenicity island component AL072_03725 PF00004 ATPase family associated with various cellular activities (AAA) AL072_03730 PF00202 Aminotransferase class-III AL072_03760 PF04341 Protein of unknown function, DUF485 AL072_03765 PF00474 Sodium:solute symporter family AL072_03780 PF00795 Carbon-nitrogen hydrolase AL072_03785 PF00462 Glutaredoxin AL072_03790 PF00156 Phosphoribosyl transferase domain AL072_03820 PF00563 EAL domain AL072_03820 PF00990 Diguanylate cyclase, GGDEF domain AL072_03820 PF08447 PAS fold AL072_03820 PF08448 PAS fold AL072_03830 PF01546 Peptidase family M20/M25/M40 AL072_03830 PF07687 Peptidase dimerisation domain AL072_03835 PF02798 Glutathione S-transferase, N-terminal domain AL072_03835 PF00043 Glutathione S-transferase, C-terminal domain AL072_03840 PF06906 Protein of unknown function (DUF1272) AL072_03845 PF11849 Domain of unknown function (DUF3369) AL072_03850 PF00072 Response regulator receiver domain AL072_03860 PF04055 Radical SAM superfamily AL072_03875 PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit AL072_03885 PF00890 FAD binding domain AL072_03885 PF02910 Fumarate reductase flavoprotein C-term AL072_03890 PF13085 2Fe-2S iron-sulfur cluster binding domain AL072_03890 PF13237 4Fe-4S dicluster domain AL072_03895 PF00561 alpha/beta hydrolase fold AL072_03900 PF01149 Formamidopyrimidine-DNA glycosylase N-terminal domain AL072_03900 PF06831 Formamidopyrimidine-DNA glycosylase H2TH domain AL072_03910 PF00378 Enoyl-CoA hydratase/isomerase AL072_03915 PF01649 Ribosomal protein S20 AL072_03920 PF00308 Bacterial dnaA protein AL072_03920 PF08299 Bacterial dnaA protein helix-turn-helix AL072_03920 PF11638 DnaA N-terminal domain AL072_03925 PF13416 Bacterial extracellular solute-binding protein AL072_03930 PF08402 TOBE domain AL072_03930 PF00005 ABC transporter AL072_03940 PF01479 S4 domain AL072_03955 PF00072 Response regulator receiver domain AL072_03955 PF00486 Transcriptional regulatory protein, C terminal AL072_03960 PF00672 HAMP domain AL072_03960 PF00512 His Kinase A (phospho-acceptor) domain AL072_03960 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AL072_03965 PF00905 Penicillin binding protein transpeptidase domain AL072_03965 PF00912 Transglycosylase AL072_03985 PF00962 Adenosine/AMP deaminase AL072_03995 PF11700 Vacuole effluxer Atg22 like AL072_04015 PF05221 S-adenosyl-L-homocysteine hydrolase AL072_04015 PF00670 S-adenosyl-L-homocysteine hydrolase, NAD binding domain AL072_04050 PF00534 Glycosyl transferases group 1 AL072_04050 PF13477 Glycosyl transferase 4-like AL072_04065 PF01527 Transposase AL072_04070 PF08245 Mur ligase middle domain AL072_04070 PF02875 Mur ligase family, glutamate ligase domain AL072_04075 PF01039 Carboxyl transferase domain AL072_04075 PF17848 Acetyl-coA carboxylase zinc finger domain AL072_04090 PF00290 Tryptophan synthase alpha chain AL072_04095 PF00291 Pyridoxal-phosphate dependent enzyme AL072_04100 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AL072_04100 PF00072 Response regulator receiver domain AL072_04105 PF00313 'Cold-shock' DNA-binding domain AL072_04110 PF00072 Response regulator receiver domain AL072_04110 PF02954 Bacterial regulatory protein, Fis family AL072_04110 PF00158 Sigma-54 interaction domain AL072_04115 PF04127 DNA / pantothenate metabolism flavoprotein AL072_04115 PF02441 Flavoprotein AL072_04120 PF00692 dUTPase AL072_04125 PF00072 Response regulator receiver domain AL072_04125 PF00672 HAMP domain AL072_04125 PF00512 His Kinase A (phospho-acceptor) domain AL072_04125 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AL072_04125 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) AL072_04125 PF01627 Hpt domain AL072_04130 PF00512 His Kinase A (phospho-acceptor) domain AL072_04130 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AL072_04140 PF02899 Phage integrase, N-terminal SAM-like domain AL072_04140 PF00589 Phage integrase family AL072_04150 PF01202 Shikimate kinase AL072_04155 PF01761 3-dehydroquinate synthase AL072_04180 PF01722 BolA-like protein AL072_04185 PF00226 DnaJ domain AL072_04190 PF12556 Cobaltochelatase CobS subunit N terminal AL072_04190 PF08406 CbbQ/NirQ/NorQ C-terminal AL072_04190 PF07728 AAA domain (dynein-related subfamily) AL072_04195 PF06213 Cobalamin biosynthesis protein CobT AL072_04195 PF11775 Cobalamin biosynthesis protein CobT VWA domain AL072_04200 PF00211 Adenylate and Guanylate cyclase catalytic domain AL072_04200 PF02743 Cache domain AL072_04200 PF00672 HAMP domain AL072_04205 PF01435 Peptidase family M48 AL072_04220 PF00391 PEP-utilising enzyme, mobile domain AL072_04220 PF02896 PEP-utilising enzyme, TIM barrel domain AL072_04220 PF05524 PEP-utilising enzyme, N-terminal AL072_04225 PF00381 PTS HPr component phosphorylation site AL072_04230 PF03610 PTS system fructose IIA component AL072_04230 PF03830 PTS system sorbose subfamily IIB component AL072_04235 PF03668 P-loop ATPase protein family AL072_04240 PF07475 HPr Serine kinase C-terminal domain AL072_04240 PF02603 HPr Serine kinase N terminus AL072_04250 PF13756 Stimulus-sensing domain AL072_04250 PF00672 HAMP domain AL072_04250 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AL072_04250 PF13755 Sensor N-terminal transmembrane domain AL072_04250 PF00512 His Kinase A (phospho-acceptor) domain AL072_04255 PF00072 Response regulator receiver domain AL072_04255 PF00486 Transcriptional regulatory protein, C terminal AL072_04265 PF00821 Phosphoenolpyruvate carboxykinase C-terminal P-loop domain AL072_04265 PF17297 Phosphoenolpyruvate carboxykinase N-terminal domain AL072_04315 PF05443 ROS/MUCR transcriptional regulator protein AL072_04330 PF00814 Glycoprotease family AL072_04335 PF01427 D-ala-D-ala dipeptidase AL072_04355 PF00012 Hsp70 protein AL072_04360 PF00226 DnaJ domain AL072_04360 PF01556 DnaJ C terminal domain AL072_04360 PF00684 DnaJ central domain AL072_04365 PF00990 Diguanylate cyclase, GGDEF domain AL072_04365 PF08448 PAS fold AL072_04370 PF02834 LigT like Phosphoesterase AL072_04375 PF00248 Aldo/keto reductase family AL072_04380 PF08495 FIST N domain AL072_04380 PF10442 FIST C domain AL072_04385 PF13472 GDSL-like Lipase/Acylhydrolase family AL072_04390 PF00005 ABC transporter AL072_04395 PF00005 ABC transporter AL072_04395 PF02687 FtsX-like permease family AL072_04395 PF12704 MacB-like periplasmic core domain AL072_04400 PF01027 Inhibitor of apoptosis-promoting Bax1 AL072_04410 PF00486 Transcriptional regulatory protein, C terminal AL072_04410 PF00072 Response regulator receiver domain AL072_04415 PF00005 ABC transporter AL072_04420 PF00528 Binding-protein-dependent transport system inner membrane component AL072_04425 PF00528 Binding-protein-dependent transport system inner membrane component AL072_04430 PF12849 PBP superfamily domain AL072_04435 PF16736 Single Cache-like AL072_04435 PF00989 PAS fold AL072_04435 PF00512 His Kinase A (phospho-acceptor) domain AL072_04435 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AL072_04440 PF01381 Helix-turn-helix AL072_04450 PF03949 Malic enzyme, NAD binding domain AL072_04450 PF01515 Phosphate acetyl/butaryl transferase AL072_04450 PF00390 Malic enzyme, N-terminal domain AL072_04455 PF07690 Major Facilitator Superfamily AL072_04460 PF03725 3' exoribonuclease family, domain 2 AL072_04460 PF01138 3' exoribonuclease family, domain 1 AL072_04465 PF01725 Ham1 family AL072_04470 PF06969 HemN C-terminal domain AL072_04470 PF04055 Radical SAM superfamily AL072_04475 PF00186 Dihydrofolate reductase AL072_04480 PF17762 HTH domain found in ParB protein AL072_04480 PF02195 ParB-like nuclease domain AL072_04485 PF13614 AAA domain AL072_04490 PF02527 rRNA small subunit methyltransferase G AL072_04495 PF13932 GidA associated domain AL072_04495 PF01134 Glucose inhibited division protein A AL072_04500 PF01926 50S ribosome-binding GTPase AL072_04500 PF12631 MnmE helical domain AL072_04500 PF10396 GTP-binding protein TrmE N-terminus AL072_04515 PF03190 Protein of unknown function, DUF255 AL072_04520 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain AL072_04520 PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain AL072_04525 PF08240 Alcohol dehydrogenase GroES-like domain AL072_04525 PF00107 Zinc-binding dehydrogenase AL072_04530 PF00929 Exonuclease AL072_04535 PF01121 Dephospho-CoA kinase AL072_04540 PF08501 Shikimate dehydrogenase substrate binding domain AL072_04540 PF01488 Shikimate / quinate 5-dehydrogenase AL072_04540 PF18317 Shikimate 5'-dehydrogenase C-terminal domain AL072_04545 PF02545 Maf-like protein AL072_04550 PF03618 Kinase/pyrophosphorylase AL072_04555 PF01208 Uroporphyrinogen decarboxylase (URO-D) AL072_04560 PF00762 Ferrochelatase AL072_04570 PF07498 Rho termination factor, N-terminal domain AL072_04570 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain AL072_04570 PF07497 Rho termination factor, RNA-binding domain AL072_04575 PF02556 Preprotein translocase subunit SecB AL072_04580 PF04186 FxsA cytoplasmic membrane protein AL072_04585 PF04280 Tim44-like domain AL072_04590 PF03562 MltA specific insert domain AL072_04590 PF06725 3D domain AL072_04595 PF00004 ATPase family associated with various cellular activities (AAA) AL072_04595 PF10431 C-terminal, D2-small domain, of ClpB protein AL072_04595 PF07724 AAA domain (Cdc48 subfamily) AL072_04600 PF00227 Proteasome subunit AL072_04610 PF00475 Imidazoleglycerol-phosphate dehydratase AL072_04615 PF00117 Glutamine amidotransferase class-I AL072_04620 PF00583 Acetyltransferase (GNAT) family AL072_04625 PF00977 Histidine biosynthesis protein AL072_04630 PF00977 Histidine biosynthesis protein AL072_04635 PF01503 Phosphoribosyl-ATP pyrophosphohydrolase AL072_04640 PF01230 HIT domain AL072_04655 PF08501 Shikimate dehydrogenase substrate binding domain AL072_04665 PF03918 Cytochrome C biogenesis protein AL072_04670 PF08534 Redoxin AL072_04675 PF16327 Cytochrome c-type biogenesis protein CcmF C-terminal AL072_04675 PF01578 Cytochrome C assembly protein AL072_04680 PF03100 CcmE AL072_04690 PF01578 Cytochrome C assembly protein AL072_04695 PF01878 EVE domain AL072_04715 PF00013 KH domain AL072_04715 PF03726 Polyribonucleotide nucleotidyltransferase, RNA binding domain AL072_04715 PF03725 3' exoribonuclease family, domain 2 AL072_04715 PF00575 S1 RNA binding domain AL072_04715 PF01138 3' exoribonuclease family, domain 1 AL072_04720 PF00312 Ribosomal protein S15 AL072_04725 PF16198 tRNA pseudouridylate synthase B C-terminal domain AL072_04725 PF01509 TruB family pseudouridylate synthase (N terminal domain) AL072_04730 PF02033 Ribosome-binding factor A AL072_04735 PF04760 Translation initiation factor IF-2, N-terminal region AL072_04735 PF08364 Bacterial translation initiation factor IF-2 associated region AL072_04735 PF11987 Translation-initiation factor 2 AL072_04735 PF03144 Elongation factor Tu domain 2 AL072_04735 PF00009 Elongation factor Tu GTP binding domain AL072_04735 PF04760 Translation initiation factor IF-2, N-terminal region AL072_04735 PF08364 Bacterial translation initiation factor IF-2 associated region AL072_04735 PF11987 Translation-initiation factor 2 AL072_04735 PF03144 Elongation factor Tu domain 2 AL072_04735 PF00009 Elongation factor Tu GTP binding domain AL072_04745 PF08529 NusA N-terminal domain AL072_04745 PF13184 NusA-like KH domain AL072_04745 PF00575 S1 RNA binding domain AL072_04750 PF02576 RimP N-terminal domain AL072_04750 PF17384 RimP C-terminal SH3 domain AL072_04755 PF03992 Antibiotic biosynthesis monooxygenase AL072_04760 PF02390 Putative methyltransferase AL072_04765 PF02773 S-adenosylmethionine synthetase, C-terminal domain AL072_04765 PF02772 S-adenosylmethionine synthetase, central domain AL072_04765 PF00438 S-adenosylmethionine synthetase, N-terminal domain AL072_04770 PF01381 Helix-turn-helix AL072_04775 PF00795 Carbon-nitrogen hydrolase AL072_04780 PF00571 CBS domain AL072_04780 PF03471 Transporter associated domain AL072_04785 PF02130 Uncharacterized protein family UPF0054 AL072_04790 PF02562 PhoH-like protein AL072_04795 PF00919 Uncharacterized protein family UPF0004 AL072_04795 PF01938 TRAM domain AL072_04795 PF04055 Radical SAM superfamily AL072_04805 PF04379 ApaG domain AL072_04810 PF01227 GTP cyclohydrolase I AL072_04815 PF04073 Aminoacyl-tRNA editing domain AL072_04825 PF00174 Oxidoreductase molybdopterin binding domain AL072_04830 PF00924 Mechanosensitive ion channel AL072_04845 PF00730 HhH-GPD superfamily base excision DNA repair protein AL072_04845 PF00633 Helix-hairpin-helix motif AL072_04845 PF10576 Iron-sulfur binding domain of endonuclease III AL072_04860 PF02801 Beta-ketoacyl synthase, C-terminal domain AL072_04860 PF00109 Beta-ketoacyl synthase, N-terminal domain AL072_04865 PF00294 pfkB family carbohydrate kinase AL072_04880 PF01925 Sulfite exporter TauE/SafE AL072_04895 PF01106 NifU-like domain AL072_04905 PF00072 Response regulator receiver domain AL072_04910 PF01025 GrpE AL072_04915 PF01628 HrcA protein C terminal domain AL072_04920 PF02633 Creatinine amidohydrolase AL072_04925 PF01078 Magnesium chelatase, subunit ChlI AL072_04925 PF13335 Magnesium chelatase, subunit ChlI C-terminal AL072_04940 PF02417 Chromate transporter AL072_04950 PF01470 Pyroglutamyl peptidase AL072_04955 PF00579 tRNA synthetases class I (W and Y) AL072_04965 PF03466 LysR substrate binding domain AL072_04965 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AL072_04970 PF02951 Prokaryotic glutathione synthetase, N-terminal domain AL072_04970 PF02955 Prokaryotic glutathione synthetase, ATP-grasp domain AL072_04980 PF02021 Uncharacterised protein family UPF0102 AL072_04985 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases AL072_04995 PF00528 Binding-protein-dependent transport system inner membrane component AL072_05000 PF00528 Binding-protein-dependent transport system inner membrane component AL072_05005 PF00497 Bacterial extracellular solute-binding proteins, family 3 AL072_05010 PF00005 ABC transporter AL072_05015 PF02080 TrkA-C domain AL072_05015 PF06826 Predicted Permease Membrane Region AL072_05020 PF00005 ABC transporter AL072_05025 PF03379 CcmB protein AL072_05030 PF00255 Glutathione peroxidase AL072_05035 PF01618 MotA/TolQ/ExbB proton channel family AL072_05045 PF01551 Peptidase family M23 AL072_05045 PF08525 Opacity-associated protein A N-terminal motif AL072_05045 PF01476 LysM domain AL072_05090 PF00440 Bacterial regulatory proteins, tetR family AL072_05095 PF00512 His Kinase A (phospho-acceptor) domain AL072_05095 PF00672 HAMP domain AL072_05095 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AL072_05100 PF00486 Transcriptional regulatory protein, C terminal AL072_05100 PF00072 Response regulator receiver domain AL072_05110 PF17991 Thioredoxin like C-terminal domain AL072_05110 PF00578 AhpC/TSA family AL072_05110 PF02683 Cytochrome C biogenesis protein transmembrane region AL072_05115 PF01047 MarR family AL072_05120 PF13417 Glutathione S-transferase, N-terminal domain AL072_05125 PF00986 DNA gyrase B subunit, carboxyl terminus AL072_05125 PF00204 DNA gyrase B AL072_05125 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AL072_05125 PF01751 Toprim domain AL072_05130 PF02463 RecF/RecN/SMC N terminal domain AL072_05135 PF02767 DNA polymerase III beta subunit, central domain AL072_05135 PF00712 DNA polymerase III beta subunit, N-terminal domain AL072_05135 PF02768 DNA polymerase III beta subunit, C-terminal domain AL072_05155 PF00085 Thioredoxin AL072_05160 PF13361 UvrD-like helicase C-terminal domain AL072_05160 PF00580 UvrD/REP helicase N-terminal domain AL072_05160 PF12705 PD-(D/E)XK nuclease superfamily AL072_05165 PF12705 PD-(D/E)XK nuclease superfamily AL072_05170 PF12804 MobA-like NTP transferase domain AL072_05180 PF02367 Threonylcarbamoyl adenosine biosynthesis protein TsaE AL072_05190 PF07992 Pyridine nucleotide-disulphide oxidoreductase AL072_05195 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle AL072_05200 PF00528 Binding-protein-dependent transport system inner membrane component AL072_05205 PF12911 N-terminal TM domain of oligopeptide transport permease C AL072_05205 PF00528 Binding-protein-dependent transport system inner membrane component AL072_05215 PF00156 Phosphoribosyl transferase domain AL072_05235 PF01063 Amino-transferase class IV AL072_05275 PF00990 Diguanylate cyclase, GGDEF domain AL072_05275 PF00563 EAL domain AL072_05275 PF03707 Bacterial signalling protein N terminal repeat AL072_05295 PF00034 Cytochrome c AL072_05295 PF03150 Di-haem cytochrome c peroxidase AL072_05310 PF03459 TOBE domain AL072_05315 PF14492 Elongation Factor G, domain II AL072_05315 PF00009 Elongation factor Tu GTP binding domain AL072_05315 PF03764 Elongation factor G, domain IV AL072_05315 PF00679 Elongation factor G C-terminus AL072_05320 PF00672 HAMP domain AL072_05320 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain AL072_05320 PF17200 Single Cache domain 2 AL072_05325 PF00672 HAMP domain AL072_05325 PF12729 Four helix bundle sensory module for signal transduction AL072_05325 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain AL072_05330 PF00210 Ferritin-like domain AL072_05335 PF12282 Signal transduction histidine kinase AL072_05335 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AL072_05335 PF07568 Histidine kinase AL072_05340 PF01008 Initiation factor 2 subunit family AL072_05365 PF13180 PDZ domain AL072_05365 PF00595 PDZ domain AL072_05380 PF00216 Bacterial DNA-binding protein AL072_05390 PF02423 Ornithine cyclodeaminase/mu-crystallin family AL072_05410 PF00106 short chain dehydrogenase AL072_05420 PF03358 NADPH-dependent FMN reductase AL072_05425 PF00764 Arginosuccinate synthase AL072_05435 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain AL072_05435 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain AL072_05450 PF03006 Haemolysin-III related AL072_05465 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AL072_05465 PF03466 LysR substrate binding domain AL072_05470 PF07690 Major Facilitator Superfamily AL072_05475 PF00378 Enoyl-CoA hydratase/isomerase AL072_05485 PF01029 NusB family AL072_05485 PF01189 16S rRNA methyltransferase RsmB/F AL072_05495 PF02142 MGS-like domain AL072_05495 PF01808 AICARFT/IMPCHase bienzyme AL072_05500 PF04545 Sigma-70, region 4 AL072_05500 PF00140 Sigma-70 factor, region 1.2 AL072_05500 PF04542 Sigma-70 region 2 AL072_05515 PF11953 Domain of unknown function (DUF3470) AL072_05515 PF00037 4Fe-4S binding domain AL072_05520 PF03466 LysR substrate binding domain AL072_05520 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AL072_05530 PF00478 IMP dehydrogenase / GMP reductase domain AL072_05530 PF00571 CBS domain AL072_05535 PF03741 Integral membrane protein TerC family AL072_05540 PF06965 Na+/H+ antiporter 1 AL072_05550 PF04055 Radical SAM superfamily AL072_05585 PF00672 HAMP domain AL072_05585 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain AL072_05590 PF00005 ABC transporter AL072_05590 PF00664 ABC transporter transmembrane region AL072_05600 PF00215 Orotidine 5'-phosphate decarboxylase / HUMPS family AL072_05605 PF00697 N-(5'phosphoribosyl)anthranilate (PRA) isomerase AL072_05610 PF00990 Diguanylate cyclase, GGDEF domain AL072_05610 PF00072 Response regulator receiver domain AL072_05625 PF00155 Aminotransferase class I and II AL072_05640 PF00528 Binding-protein-dependent transport system inner membrane component AL072_05645 PF00528 Binding-protein-dependent transport system inner membrane component AL072_05660 PF05958 tRNA (Uracil-5-)-methyltransferase AL072_05665 PF17785 PUA-like domain AL072_05665 PF10672 S-adenosylmethionine-dependent methyltransferase AL072_05675 PF00115 Cytochrome C and Quinol oxidase polypeptide I AL072_05690 PF14715 N-terminal domain of cytochrome oxidase-cbb3, FixP AL072_05690 PF13442 Cytochrome C oxidase, cbb3-type, subunit III AL072_05690 PF00034 Cytochrome c AL072_05705 PF00027 Cyclic nucleotide-binding domain AL072_05705 PF13545 Crp-like helix-turn-helix domain AL072_05710 PF02628 Cytochrome oxidase assembly protein AL072_05715 PF00959 Phage lysozyme AL072_05725 PF00166 Chaperonin 10 Kd subunit AL072_05730 PF00118 TCP-1/cpn60 chaperonin family AL072_05745 PF00072 Response regulator receiver domain AL072_05745 PF00196 Bacterial regulatory proteins, luxR family AL072_05760 PF08240 Alcohol dehydrogenase GroES-like domain AL072_05760 PF00107 Zinc-binding dehydrogenase AL072_05765 PF03466 LysR substrate binding domain AL072_05765 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AL072_05780 PF00563 EAL domain AL072_05780 PF00990 Diguanylate cyclase, GGDEF domain AL072_05780 PF03707 Bacterial signalling protein N terminal repeat AL072_05785 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AL072_05785 PF03466 LysR substrate binding domain AL072_05790 PF07690 Major Facilitator Superfamily AL072_05795 PF00005 ABC transporter AL072_05795 PF08352 Oligopeptide/dipeptide transporter, C-terminal region AL072_05800 PF08352 Oligopeptide/dipeptide transporter, C-terminal region AL072_05800 PF00005 ABC transporter AL072_05810 PF00528 Binding-protein-dependent transport system inner membrane component AL072_05815 PF07992 Pyridine nucleotide-disulphide oxidoreductase AL072_05825 PF03551 Transcriptional regulator PadR-like family AL072_05835 PF02082 Transcriptional regulator AL072_05840 PF00291 Pyridoxal-phosphate dependent enzyme AL072_05850 PF00899 ThiF family AL072_05865 PF02627 Carboxymuconolactone decarboxylase family AL072_05870 PF08281 Sigma-70, region 4 AL072_05870 PF04542 Sigma-70 region 2 AL072_05870 PF12680 SnoaL-like domain AL072_05890 PF01475 Ferric uptake regulator family AL072_05895 PF00512 His Kinase A (phospho-acceptor) domain AL072_05895 PF00989 PAS fold AL072_05895 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AL072_05900 PF00183 Hsp90 protein AL072_05910 PF00043 Glutathione S-transferase, C-terminal domain AL072_05910 PF13417 Glutathione S-transferase, N-terminal domain AL072_05925 PF16868 NMT1-like family AL072_05945 PF03255 Acetyl co-enzyme A carboxylase carboxyltransferase alpha subunit AL072_05955 PF01274 Malate synthase AL072_05960 PF02954 Bacterial regulatory protein, Fis family AL072_05960 PF00158 Sigma-54 interaction domain AL072_05965 PF04012 PspA/IM30 family AL072_05985 PF00535 Glycosyl transferase family 2 AL072_05985 PF01501 Glycosyl transferase family 8 AL072_06015 PF03900 Porphobilinogen deaminase, C-terminal domain AL072_06015 PF01379 Porphobilinogen deaminase, dipyromethane cofactor binding domain AL072_06025 PF00814 Glycoprotease family AL072_06030 PF07479 NAD-dependent glycerol-3-phosphate dehydrogenase C-terminus AL072_06030 PF01210 NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus AL072_06045 PF01336 OB-fold nucleic acid binding domain AL072_06045 PF02811 PHP domain AL072_06045 PF07733 Bacterial DNA polymerase III alpha NTPase domain AL072_06045 PF14579 Helix-hairpin-helix motif AL072_06045 PF17657 Bacterial DNA polymerase III alpha subunit finger domain AL072_06060 PF11849 Domain of unknown function (DUF3369) AL072_06065 PF02705 K+ potassium transporter AL072_06070 PF00155 Aminotransferase class I and II AL072_06070 PF00392 Bacterial regulatory proteins, gntR family AL072_06080 PF01430 Hsp33 protein AL072_06085 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain AL072_06085 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain AL072_06090 PF00202 Aminotransferase class-III AL072_06095 PF01061 ABC-2 type transporter AL072_06100 PF02631 RecX family AL072_06105 PF00830 Ribosomal L28 family AL072_06120 PF00005 ABC transporter AL072_06120 PF08352 Oligopeptide/dipeptide transporter, C-terminal region AL072_06125 PF12911 N-terminal TM domain of oligopeptide transport permease C AL072_06125 PF00528 Binding-protein-dependent transport system inner membrane component AL072_06130 PF00528 Binding-protein-dependent transport system inner membrane component AL072_06135 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle AL072_06140 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle AL072_06150 PF00459 Inositol monophosphatase family AL072_06155 PF09297 NADH pyrophosphatase zinc ribbon domain AL072_06155 PF09296 NADH pyrophosphatase-like rudimentary NUDIX domain AL072_06155 PF00293 NUDIX domain AL072_06170 PF01842 ACT domain AL072_06170 PF00800 Prephenate dehydratase AL072_06175 PF02348 Cytidylyltransferase AL072_06180 PF00034 Cytochrome c AL072_06190 PF01339 CheB methylesterase AL072_06190 PF00072 Response regulator receiver domain AL072_06195 PF06798 PrkA serine protein kinase C-terminal domain AL072_06195 PF08298 PrkA AAA domain AL072_06200 PF04285 Protein of unknown function (DUF444) AL072_06205 PF04293 SpoVR like protein AL072_06210 PF01728 FtsJ-like methyltransferase AL072_06220 PF00144 Beta-lactamase AL072_06225 PF13193 AMP-binding enzyme C-terminal domain AL072_06225 PF00501 AMP-binding enzyme AL072_06230 PF00708 Acylphosphatase AL072_06245 PF03099 Biotin/lipoate A/B protein ligase family AL072_06260 PF01266 FAD dependent oxidoreductase AL072_06260 PF05690 Thiazole biosynthesis protein ThiG AL072_06270 PF05690 Thiazole biosynthesis protein ThiG AL072_06300 PF00072 Response regulator receiver domain AL072_06300 PF00486 Transcriptional regulatory protein, C terminal AL072_06395 PF00884 Sulfatase AL072_06405 PF07992 Pyridine nucleotide-disulphide oxidoreductase AL072_06405 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain AL072_06410 PF00589 Phage integrase family AL072_06410 PF02899 Phage integrase, N-terminal SAM-like domain AL072_06420 PF00923 Transaldolase/Fructose-6-phosphate aldolase AL072_06425 PF18074 Primosomal protein N C-terminal domain AL072_06425 PF17764 3′ DNA-binding domain (3′BD) AL072_06425 PF00270 DEAD/DEAH box helicase AL072_06425 PF18319 PriA DNA helicase Cys-rich region (CRR) domain AL072_06440 PF00213 ATP synthase delta (OSCP) subunit AL072_06445 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain AL072_06445 PF00306 ATP synthase alpha/beta chain, C terminal domain AL072_06445 PF02874 ATP synthase alpha/beta family, beta-barrel domain AL072_06450 PF00231 ATP synthase AL072_06455 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain AL072_06455 PF02874 ATP synthase alpha/beta family, beta-barrel domain AL072_06460 PF02823 ATP synthase, Delta/Epsilon chain, beta-sandwich domain AL072_06470 PF00043 Glutathione S-transferase, C-terminal domain AL072_06470 PF02798 Glutathione S-transferase, N-terminal domain AL072_06475 PF00270 DEAD/DEAH box helicase AL072_06475 PF00271 Helicase conserved C-terminal domain AL072_06480 PF00080 Copper/zinc superoxide dismutase (SODC) AL072_06485 PF01475 Ferric uptake regulator family AL072_06520 PF13229 Right handed beta helix region AL072_06520 PF00353 RTX calcium-binding nonapeptide repeat (4 copies) AL072_06520 PF12708 Pectate lyase superfamily protein AL072_06545 PF01180 Dihydroorotate dehydrogenase AL072_06550 PF03707 Bacterial signalling protein N terminal repeat AL072_06550 PF00990 Diguanylate cyclase, GGDEF domain AL072_06550 PF00563 EAL domain AL072_06565 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain AL072_06565 PF02824 TGS domain AL072_06565 PF03129 Anticodon binding domain AL072_06565 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) AL072_06570 PF05198 Translation initiation factor IF-3, N-terminal domain AL072_06570 PF00707 Translation initiation factor IF-3, C-terminal domain AL072_06585 PF01494 FAD binding domain AL072_06590 PF00132 Bacterial transferase hexapeptide (six repeats) AL072_06600 PF04209 homogentisate 1,2-dioxygenase AL072_06610 PF00672 HAMP domain AL072_06610 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain AL072_06615 PF00970 Oxidoreductase FAD-binding domain AL072_06615 PF00111 2Fe-2S iron-sulfur cluster binding domain AL072_06615 PF00175 Oxidoreductase NAD-binding domain AL072_06625 PF07848 PaaX-like protein AL072_06625 PF08223 PaaX-like protein C-terminal domain AL072_06630 PF13458 Periplasmic binding protein AL072_06635 PF02653 Branched-chain amino acid transport system / permease component AL072_06640 PF02653 Branched-chain amino acid transport system / permease component AL072_06640 PF11862 Domain of unknown function (DUF3382) AL072_06645 PF00005 ABC transporter AL072_06645 PF12399 Branched-chain amino acid ATP-binding cassette transporter AL072_06650 PF00005 ABC transporter AL072_06655 PF02798 Glutathione S-transferase, N-terminal domain AL072_06655 PF14497 Glutathione S-transferase, C-terminal domain AL072_06660 PF17149 Periplasmic sensor domain found in signal transduction proteins AL072_06660 PF00672 HAMP domain AL072_06660 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AL072_06660 PF00512 His Kinase A (phospho-acceptor) domain AL072_06660 PF00072 Response regulator receiver domain AL072_06660 PF01627 Hpt domain AL072_06680 PF00313 'Cold-shock' DNA-binding domain AL072_06690 PF00571 CBS domain AL072_06700 PF09335 SNARE associated Golgi protein AL072_06710 PF13488 Glycine zipper AL072_06710 PF00691 OmpA family AL072_06725 PF07722 Peptidase C26 AL072_06735 PF00512 His Kinase A (phospho-acceptor) domain AL072_06735 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AL072_06745 PF03795 YCII-related domain AL072_06765 PF00694 Aconitase C-terminal domain AL072_06765 PF00330 Aconitase family (aconitate hydratase) AL072_06775 PF16177 Acetyl-coenzyme A synthetase N-terminus AL072_06775 PF13193 AMP-binding enzyme C-terminal domain AL072_06775 PF00501 AMP-binding enzyme AL072_06790 PF03480 Bacterial extracellular solute-binding protein, family 7 AL072_06805 PF00132 Bacterial transferase hexapeptide (six repeats) AL072_06815 PF04397 LytTr DNA-binding domain AL072_06825 PF07995 Glucose / Sorbosone dehydrogenase AL072_06830 PF00512 His Kinase A (phospho-acceptor) domain AL072_06830 PF01627 Hpt domain AL072_06830 PF00072 Response regulator receiver domain AL072_06830 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) AL072_06830 PF00672 HAMP domain AL072_06830 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AL072_06835 PF00563 EAL domain AL072_06835 PF01590 GAF domain AL072_06835 PF00990 Diguanylate cyclase, GGDEF domain AL072_06835 PF00360 Phytochrome region AL072_06845 PF03453 MoeA N-terminal region (domain I and II) AL072_06845 PF03454 MoeA C-terminal region (domain IV) AL072_06845 PF00994 Probable molybdopterin binding domain AL072_06850 PF04542 Sigma-70 region 2 AL072_06850 PF04545 Sigma-70, region 4 AL072_06865 PF08502 LeuA allosteric (dimerisation) domain AL072_06865 PF00682 HMGL-like AL072_06870 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase AL072_06870 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase AL072_06880 PF03547 Membrane transport protein AL072_06890 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain AL072_06890 PF00672 HAMP domain AL072_06895 PF13307 Helicase C-terminal domain AL072_06895 PF04851 Type III restriction enzyme, res subunit AL072_06895 PF00929 Exonuclease AL072_06900 PF00912 Transglycosylase AL072_06910 PF00271 Helicase conserved C-terminal domain AL072_06910 PF00270 DEAD/DEAH box helicase AL072_06925 PF02654 Cobalamin-5-phosphate synthase AL072_06930 PF01327 Polypeptide deformylase AL072_06935 PF02911 Formyl transferase, C-terminal domain AL072_06935 PF00551 Formyl transferase AL072_06940 PF01416 tRNA pseudouridine synthase AL072_06950 PF03466 LysR substrate binding domain AL072_06950 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AL072_06960 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle AL072_06965 PF02774 Semialdehyde dehydrogenase, dimerisation domain AL072_06965 PF01118 Semialdehyde dehydrogenase, NAD binding domain AL072_06970 PF02653 Branched-chain amino acid transport system / permease component AL072_06975 PF00330 Aconitase family (aconitate hydratase) AL072_06980 PF01565 FAD binding domain AL072_06980 PF02913 FAD linked oxidases, C-terminal domain AL072_06985 PF03481 Putative GTP-binding controlling metal-binding AL072_06985 PF01300 Telomere recombination AL072_06990 PF13614 AAA domain AL072_06995 PF00210 Ferritin-like domain AL072_07000 PF00210 Ferritin-like domain AL072_07005 PF00579 tRNA synthetases class I (W and Y) AL072_07015 PF03710 Glutamate-ammonia ligase adenylyltransferase AL072_07015 PF08335 GlnD PII-uridylyltransferase AL072_07020 PF00578 AhpC/TSA family AL072_07030 PF03702 Anhydro-N-acetylmuramic acid kinase AL072_07035 PF03588 Leucyl/phenylalanyl-tRNA protein transferase AL072_07040 PF00445 Ribonuclease T2 family AL072_07045 PF01256 Carbohydrate kinase AL072_07050 PF13456 Reverse transcriptase-like AL072_07050 PF00300 Histidine phosphatase superfamily (branch 1) AL072_07055 PF00724 NADH:flavin oxidoreductase / NADH oxidase family AL072_07060 PF00313 'Cold-shock' DNA-binding domain AL072_07120 PF02646 RmuC family AL072_07125 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain AL072_07125 PF00672 HAMP domain AL072_07125 PF17200 Single Cache domain 2 AL072_07145 PF00011 Hsp20/alpha crystallin family AL072_07150 PF01266 FAD dependent oxidoreductase AL072_07155 PF00163 Ribosomal protein S4/S9 N-terminal domain AL072_07155 PF01479 S4 domain AL072_07160 PF00990 Diguanylate cyclase, GGDEF domain AL072_07160 PF00072 Response regulator receiver domain AL072_07175 PF01740 STAS domain AL072_07180 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain AL072_07180 PF00672 HAMP domain AL072_07180 PF02743 Cache domain AL072_07185 PF00072 Response regulator receiver domain AL072_07185 PF01339 CheB methylesterase AL072_07190 PF03975 CheD chemotactic sensory transduction AL072_07195 PF01739 CheR methyltransferase, SAM binding domain AL072_07195 PF03705 CheR methyltransferase, all-alpha domain AL072_07200 PF02203 Tar ligand binding domain homologue AL072_07200 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain AL072_07200 PF00672 HAMP domain AL072_07205 PF01584 CheW-like domain AL072_07210 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AL072_07210 PF01584 CheW-like domain AL072_07210 PF02895 Signal transducing histidine kinase, homodimeric domain AL072_07210 PF01627 Hpt domain AL072_07215 PF00072 Response regulator receiver domain AL072_07225 PF00293 NUDIX domain AL072_07230 PF01925 Sulfite exporter TauE/SafE AL072_07235 PF00171 Aldehyde dehydrogenase family AL072_07240 PF01467 Cytidylyltransferase-like AL072_07250 PF02590 Predicted SPOUT methyltransferase AL072_07255 PF06415 BPG-independent PGAM N-terminus (iPGM_N) AL072_07255 PF01676 Metalloenzyme superfamily AL072_07260 PF01551 Peptidase family M23 AL072_07265 PF13180 PDZ domain AL072_07265 PF03572 Peptidase family S41 AL072_07275 PF13419 Haloacid dehalogenase-like hydrolase AL072_07280 PF01472 PUA domain AL072_07280 PF00696 Amino acid kinase family AL072_07285 PF01926 50S ribosome-binding GTPase AL072_07285 PF01018 GTP1/OBG AL072_07290 PF01016 Ribosomal L27 protein AL072_07295 PF00829 Ribosomal prokaryotic L21 protein AL072_07310 PF00011 Hsp20/alpha crystallin family AL072_07320 PF01197 Ribosomal protein L31 AL072_07325 PF00005 ABC transporter AL072_07325 PF00664 ABC transporter transmembrane region AL072_07335 PF03411 Penicillin-insensitive murein endopeptidase AL072_07370 PF07879 PHB/PHA accumulation regulator DNA-binding domain AL072_07370 PF05233 PHB accumulation regulatory domain AL072_07375 PF07167 Poly-beta-hydroxybutyrate polymerase (PhaC) N-terminus AL072_07380 PF02803 Thiolase, C-terminal domain AL072_07380 PF00108 Thiolase, N-terminal domain AL072_07390 PF01977 3-octaprenyl-4-hydroxybenzoate carboxy-lyase AL072_07400 PF03966 Trm112p-like protein AL072_07410 PF00085 Thioredoxin AL072_07425 PF03737 Aldolase/RraA AL072_07435 PF00672 HAMP domain AL072_07435 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain AL072_07445 PF00672 HAMP domain AL072_07445 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain AL072_07450 PF00535 Glycosyl transferase family 2 AL072_07460 PF00144 Beta-lactamase AL072_07475 PF02540 NAD synthase AL072_07475 PF00795 Carbon-nitrogen hydrolase AL072_07495 PF00561 alpha/beta hydrolase fold AL072_07500 PF01047 MarR family AL072_07505 PF00749 tRNA synthetases class I (E and Q), catalytic domain AL072_07510 PF01406 tRNA synthetases class I (C) catalytic domain AL072_07510 PF09190 DALR domain AL072_07520 PF01523 Putative modulator of DNA gyrase AL072_07525 PF00909 Ammonium Transporter Family AL072_07535 PF00586 AIR synthase related protein, N-terminal domain AL072_07535 PF18072 Formylglycinamide ribonucleotide amidotransferase linker domain AL072_07535 PF02769 AIR synthase related protein, C-terminal domain AL072_07555 PF00072 Response regulator receiver domain AL072_07565 PF02092 Glycyl-tRNA synthetase beta subunit AL072_07565 PF05746 DALR anticodon binding domain AL072_07570 PF02091 Glycyl-tRNA synthetase alpha subunit AL072_07600 PF02624 YcaO cyclodehydratase, ATP-ad Mg2+-binding AL072_07615 PF00899 ThiF family AL072_07620 PF00072 Response regulator receiver domain AL072_07620 PF01966 HD domain AL072_07625 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AL072_07625 PF00989 PAS fold AL072_07625 PF00512 His Kinase A (phospho-acceptor) domain AL072_07630 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AL072_07630 PF00512 His Kinase A (phospho-acceptor) domain AL072_07630 PF02743 Cache domain AL072_07635 PF00512 His Kinase A (phospho-acceptor) domain AL072_07635 PF16736 Single Cache-like AL072_07635 PF00989 PAS fold AL072_07635 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AL072_07645 PF00929 Exonuclease AL072_07650 PF00072 Response regulator receiver domain AL072_07650 PF00486 Transcriptional regulatory protein, C terminal AL072_07660 PF02416 mttA/Hcf106 family AL072_07665 PF04279 Intracellular septation protein A AL072_07680 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family AL072_07690 PF06988 NifT/FixU protein AL072_07695 PF00266 Aminotransferase class-V AL072_07705 PF04319 NifZ domain AL072_07720 PF12838 4Fe-4S dicluster domain AL072_07725 PF02579 Dinitrogenase iron-molybdenum cofactor AL072_07725 PF04055 Radical SAM superfamily AL072_07730 PF00211 Adenylate and Guanylate cyclase catalytic domain AL072_07735 PF00158 Sigma-54 interaction domain AL072_07735 PF13185 GAF domain AL072_07735 PF02954 Bacterial regulatory protein, Fis family AL072_07750 PF00005 ABC transporter AL072_07765 PF13426 PAS domain AL072_07765 PF00072 Response regulator receiver domain AL072_07765 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AL072_07795 PF13793 N-terminal domain of ribose phosphate pyrophosphokinase AL072_07795 PF14572 Phosphoribosyl synthetase-associated domain AL072_07810 PF01790 Prolipoprotein diacylglyceryl transferase AL072_07815 PF01370 NAD dependent epimerase/dehydratase family AL072_07830 PF08502 LeuA allosteric (dimerisation) domain AL072_07830 PF00682 HMGL-like AL072_07835 PF04172 LrgB-like family AL072_07840 PF03788 LrgA family AL072_07855 PF03781 Sulfatase-modifying factor enzyme 1 AL072_07855 PF12867 DinB superfamily AL072_07860 PF00471 Ribosomal protein L33 AL072_07865 PF13180 PDZ domain AL072_07865 PF03572 Peptidase family S41 AL072_07870 PF00575 S1 RNA binding domain AL072_07870 PF00773 RNB domain AL072_07870 PF08461 Ribonuclease R winged-helix domain AL072_07870 PF17876 Cold shock domain AL072_07870 PF08206 Ribonuclease B OB domain AL072_07880 PF01264 Chorismate synthase AL072_07895 PF02719 Polysaccharide biosynthesis protein AL072_07900 PF01370 NAD dependent epimerase/dehydratase family AL072_07915 PF00953 Glycosyl transferase family 4 AL072_07920 PF01370 NAD dependent epimerase/dehydratase family AL072_07930 PF00583 Acetyltransferase (GNAT) family AL072_07940 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) AL072_07955 PF01965 DJ-1/PfpI family AL072_07960 PF00072 Response regulator receiver domain AL072_07960 PF00196 Bacterial regulatory proteins, luxR family AL072_07965 PF00196 Bacterial regulatory proteins, luxR family AL072_07965 PF00072 Response regulator receiver domain AL072_07970 PF01774 UreD urease accessory protein AL072_07975 PF00547 Urease, gamma subunit AL072_07980 PF00699 Urease beta subunit AL072_07985 PF00449 Urease alpha-subunit, N-terminal domain AL072_07985 PF01979 Amidohydrolase family AL072_07990 PF01177 Asp/Glu/Hydantoin racemase AL072_07995 PF02814 UreE urease accessory protein, N-terminal domain AL072_07995 PF05194 UreE urease accessory protein, C-terminal domain AL072_08000 PF01730 UreF AL072_08005 PF02492 CobW/HypB/UreG, nucleotide-binding domain AL072_08040 PF00155 Aminotransferase class I and II AL072_08045 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain AL072_08045 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain AL072_08045 PF00205 Thiamine pyrophosphate enzyme, central domain AL072_08050 PF10369 Small subunit of acetolactate synthase AL072_08055 PF07991 Acetohydroxy acid isomeroreductase, NADPH-binding domain AL072_08055 PF01450 Acetohydroxy acid isomeroreductase, catalytic domain AL072_08060 PF03717 Penicillin-binding Protein dimerisation domain AL072_08060 PF00905 Penicillin binding protein transpeptidase domain AL072_08070 PF04085 rod shape-determining protein MreC AL072_08080 PF03350 Uncharacterized protein family, UPF0114 AL072_08085 PF01895 PhoU domain AL072_08090 PF01503 Phosphoribosyl-ATP pyrophosphohydrolase AL072_08095 PF13847 Methyltransferase domain AL072_08095 PF10119 Predicted methyltransferase regulatory domain AL072_08150 PF16177 Acetyl-coenzyme A synthetase N-terminus AL072_08150 PF00501 AMP-binding enzyme AL072_08150 PF13193 AMP-binding enzyme C-terminal domain AL072_08185 PF00507 NADH-ubiquinone/plastoquinone oxidoreductase, chain 3 AL072_08190 PF01058 NADH ubiquinone oxidoreductase, 20 Kd subunit AL072_08195 PF00329 Respiratory-chain NADH dehydrogenase, 30 Kd subunit AL072_08200 PF00346 Respiratory-chain NADH dehydrogenase, 49 Kd subunit AL072_08210 PF10589 NADH-ubiquinone oxidoreductase-F iron-sulfur binding region AL072_08210 PF10531 SLBB domain AL072_08210 PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit AL072_08215 PF09326 NADH-ubiquinone oxidoreductase subunit G, C-terminal AL072_08215 PF00384 Molybdopterin oxidoreductase AL072_08215 PF10588 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region AL072_08220 PF00146 NADH dehydrogenase AL072_08225 PF12838 4Fe-4S dicluster domain AL072_08230 PF00499 NADH-ubiquinone/plastoquinone oxidoreductase chain 6 AL072_08235 PF00420 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L AL072_08240 PF00361 Proton-conducting membrane transporter AL072_08240 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus AL072_08245 PF00361 Proton-conducting membrane transporter AL072_08245 PF01059 NADH-ubiquinone oxidoreductase chain 4, amino terminus AL072_08250 PF00361 Proton-conducting membrane transporter AL072_08255 PF02237 Biotin protein ligase C terminal domain AL072_08255 PF03099 Biotin/lipoate A/B protein ligase family AL072_08260 PF03309 Type III pantothenate kinase AL072_08265 PF07521 Zn-dependent metallo-hydrolase RNA specificity domain AL072_08265 PF12706 Beta-lactamase superfamily domain AL072_08265 PF17770 Ribonuclease J C-terminal domain AL072_08280 PF00117 Glutamine amidotransferase class-I AL072_08280 PF13302 Acetyltransferase (GNAT) domain AL072_08280 PF03352 Methyladenine glycosylase AL072_08280 PF13673 Acetyltransferase (GNAT) domain AL072_08280 PF00958 GMP synthase C terminal domain AL072_08295 PF03129 Anticodon binding domain AL072_08295 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) AL072_08300 PF12704 MacB-like periplasmic core domain AL072_08300 PF02687 FtsX-like permease family AL072_08305 PF00005 ABC transporter AL072_08310 PF01738 Dienelactone hydrolase family AL072_08315 PF00857 Isochorismatase family AL072_08320 PF02537 CrcB-like protein, Camphor Resistance (CrcB) AL072_08325 PF00849 RNA pseudouridylate synthase AL072_08325 PF01479 S4 domain AL072_08330 PF13419 Haloacid dehalogenase-like hydrolase AL072_08345 PF01571 Aminomethyltransferase folate-binding domain AL072_08365 PF02608 ABC transporter substrate-binding protein PnrA-like AL072_08375 PF02666 Phosphatidylserine decarboxylase AL072_08380 PF01066 CDP-alcohol phosphatidyltransferase AL072_08420 PF08331 Domain of unknown function (DUF1730) AL072_08425 PF14489 QueF-like protein AL072_08430 PF01702 Queuine tRNA-ribosyltransferase AL072_08435 PF02547 Queuosine biosynthesis protein AL072_08440 PF03109 ABC1 family AL072_08450 PF02541 Ppx/GppA phosphatase family AL072_08455 PF01728 FtsJ-like methyltransferase AL072_08460 PF00571 CBS domain AL072_08460 PF00478 IMP dehydrogenase / GMP reductase domain AL072_08470 PF01653 NAD-dependent DNA ligase adenylation domain AL072_08470 PF00533 BRCA1 C Terminus (BRCT) domain AL072_08470 PF12826 Helix-hairpin-helix motif AL072_08470 PF03120 NAD-dependent DNA ligase OB-fold domain AL072_08470 PF03119 NAD-dependent DNA ligase C4 zinc finger domain AL072_08480 PF03331 UDP-3-O-acyl N-acetylglycosamine deacetylase AL072_08485 PF12327 FtsZ family, C-terminal domain AL072_08485 PF00091 Tubulin/FtsZ family, GTPase domain AL072_08490 PF02491 SHS2 domain inserted in FTSA AL072_08495 PF03799 Cell division protein FtsQ AL072_08495 PF08478 POTRA domain, FtsQ-type AL072_08500 PF07478 D-ala D-ala ligase C-terminus AL072_08500 PF01820 D-ala D-ala ligase N-terminus AL072_08505 PF02873 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain AL072_08505 PF01565 FAD binding domain AL072_08510 PF08245 Mur ligase middle domain AL072_08510 PF01225 Mur ligase family, catalytic domain AL072_08510 PF02875 Mur ligase family, glutamate ligase domain AL072_08520 PF04101 Glycosyltransferase family 28 C-terminal domain AL072_08520 PF03033 Glycosyltransferase family 28 N-terminal domain AL072_08525 PF01098 Cell cycle protein AL072_08530 PF08245 Mur ligase middle domain AL072_08540 PF01225 Mur ligase family, catalytic domain AL072_08540 PF08245 Mur ligase middle domain AL072_08540 PF02875 Mur ligase family, glutamate ligase domain AL072_08545 PF01225 Mur ligase family, catalytic domain AL072_08545 PF08245 Mur ligase middle domain AL072_08545 PF02875 Mur ligase family, glutamate ligase domain AL072_08550 PF03717 Penicillin-binding Protein dimerisation domain AL072_08550 PF00905 Penicillin binding protein transpeptidase domain AL072_08560 PF01795 MraW methylase family AL072_08565 PF02381 MraZ protein, putative antitoxin-like AL072_08570 PF01510 N-acetylmuramoyl-L-alanine amidase AL072_08575 PF00892 EamA-like transporter family AL072_08590 PF05099 Tellurite resistance protein TerB AL072_08590 PF00226 DnaJ domain AL072_08600 PF05378 Hydantoinase/oxoprolinase N-terminal region AL072_08600 PF01968 Hydantoinase/oxoprolinase AL072_08605 PF01590 GAF domain AL072_08605 PF02954 Bacterial regulatory protein, Fis family AL072_08605 PF00158 Sigma-54 interaction domain AL072_08610 PF05230 MASE2 domain AL072_08610 PF00990 Diguanylate cyclase, GGDEF domain AL072_08645 PF05717 IS66 Orf2 like protein AL072_08650 PF13817 IS66 C-terminal element AL072_08650 PF03050 Transposase IS66 family AL072_08650 PF13007 Transposase C of IS166 homeodomain AL072_08650 PF13005 zinc-finger binding domain of transposase IS66 AL072_08680 PF00176 SNF2 family N-terminal domain AL072_08680 PF00271 Helicase conserved C-terminal domain AL072_08685 PF13195 Protein of unknown function (DUF4011) AL072_08685 PF13086 AAA domain AL072_08685 PF13086 AAA domain AL072_08685 PF13087 AAA domain AL072_08685 PF13087 AAA domain AL072_08685 PF13195 Protein of unknown function (DUF4011) AL072_08715 PF00872 Transposase, Mutator family AL072_08760 PF00111 2Fe-2S iron-sulfur cluster binding domain AL072_08765 PF00226 DnaJ domain AL072_08765 PF07743 HSCB C-terminal oligomerisation domain AL072_08770 PF00266 Aminotransferase class-V AL072_08775 PF02082 Transcriptional regulator AL072_08780 PF00132 Bacterial transferase hexapeptide (six repeats) AL072_08785 PF02129 X-Pro dipeptidyl-peptidase (S15 family) AL072_08820 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AL072_08820 PF03466 LysR substrate binding domain AL072_08825 PF13344 Haloacid dehalogenase-like hydrolase AL072_08825 PF00293 NUDIX domain AL072_08830 PF03707 Bacterial signalling protein N terminal repeat AL072_08830 PF00990 Diguanylate cyclase, GGDEF domain AL072_08830 PF00563 EAL domain AL072_08830 PF13188 PAS domain AL072_08835 PF06071 Protein of unknown function (DUF933) AL072_08835 PF01926 50S ribosome-binding GTPase AL072_08840 PF01195 Peptidyl-tRNA hydrolase AL072_08845 PF01386 Ribosomal L25p family AL072_08845 PF14693 Ribosomal protein TL5, C-terminal domain AL072_08855 PF03129 Anticodon binding domain AL072_08855 PF13393 Histidyl-tRNA synthetase AL072_08865 PF01979 Amidohydrolase family AL072_08875 PF02601 Exonuclease VII, large subunit AL072_08875 PF13742 OB-fold nucleic acid binding domain AL072_08880 PF02844 Phosphoribosylglycinamide synthetase, N domain AL072_08880 PF01071 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain AL072_08880 PF02843 Phosphoribosylglycinamide synthetase, C domain AL072_08890 PF14437 MafB19-like deaminase AL072_08895 PF00849 RNA pseudouridylate synthase AL072_08895 PF01479 S4 domain AL072_08905 PF07690 Major Facilitator Superfamily AL072_08915 PF16657 Maltogenic Amylase, C-terminal domain AL072_08915 PF00128 Alpha amylase, catalytic domain AL072_08925 PF13460 NAD(P)H-binding AL072_08940 PF08676 MutL C terminal dimerisation domain AL072_08940 PF01119 DNA mismatch repair protein, C-terminal domain AL072_08970 PF00072 Response regulator receiver domain AL072_08970 PF00196 Bacterial regulatory proteins, luxR family AL072_08975 PF00072 Response regulator receiver domain AL072_08975 PF00196 Bacterial regulatory proteins, luxR family AL072_08980 PF13361 UvrD-like helicase C-terminal domain AL072_08980 PF00580 UvrD/REP helicase N-terminal domain AL072_09000 PF00557 Metallopeptidase family M24 AL072_09000 PF05195 Aminopeptidase P, N-terminal domain AL072_09005 PF00072 Response regulator receiver domain AL072_09020 PF14821 Threonine synthase N terminus AL072_09020 PF00291 Pyridoxal-phosphate dependent enzyme AL072_09025 PF05193 Peptidase M16 inactive domain AL072_09025 PF00675 Insulinase (Peptidase family M16) AL072_09030 PF13302 Acetyltransferase (GNAT) domain AL072_09050 PF00459 Inositol monophosphatase family AL072_09055 PF08207 Elongation factor P (EF-P) KOW-like domain AL072_09055 PF01132 Elongation factor P (EF-P) OB domain AL072_09055 PF09285 Elongation factor P, C-terminal AL072_09060 PF00152 tRNA synthetases class II (D, K and N) AL072_09065 PF03349 Outer membrane protein transport protein (OMPP1/FadL/TodX) AL072_09070 PF01925 Sulfite exporter TauE/SafE AL072_09075 PF02581 Thiamine monophosphate synthase AL072_09080 PF01791 DeoC/LacD family aldolase AL072_09100 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain AL072_09100 PF00672 HAMP domain AL072_09100 PF17200 Single Cache domain 2 AL072_09105 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain AL072_09105 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain AL072_09110 PF00456 Transketolase, thiamine diphosphate binding domain AL072_09110 PF02779 Transketolase, pyrimidine binding domain AL072_09110 PF02780 Transketolase, C-terminal domain AL072_09125 PF01812 5-formyltetrahydrofolate cyclo-ligase family AL072_09130 PF13277 YmdB-like protein AL072_09135 PF01709 Transcriptional regulator AL072_09140 PF02075 Crossover junction endodeoxyribonuclease RuvC AL072_09145 PF07499 RuvA, C-terminal domain AL072_09145 PF01330 RuvA N terminal domain AL072_09150 PF17864 RuvB AAA lid domain AL072_09150 PF05496 Holliday junction DNA helicase RuvB P-loop domain AL072_09150 PF05491 RuvB C-terminal winged helix domain AL072_09155 PF03061 Thioesterase superfamily AL072_09160 PF01618 MotA/TolQ/ExbB proton channel family AL072_09165 PF02472 Biopolymer transport protein ExbD/TolR AL072_09175 PF04052 TolB amino-terminal domain AL072_09175 PF07676 WD40-like Beta Propeller Repeat AL072_09180 PF00691 OmpA family AL072_09190 PF01171 PP-loop family AL072_09195 PF17862 AAA+ lid domain AL072_09195 PF06480 FtsH Extracellular AL072_09195 PF01434 Peptidase family M41 AL072_09195 PF00004 ATPase family associated with various cellular activities (AAA) AL072_09210 PF03631 Virulence factor BrkB AL072_09215 PF05656 Protein of unknown function (DUF805) AL072_09220 PF01556 DnaJ C terminal domain AL072_09220 PF00226 DnaJ domain AL072_09225 PF05433 Glycine zipper 2TM domain AL072_09225 PF16998 17 kDa outer membrane surface antigen AL072_09230 PF10590 Pyridoxine 5'-phosphate oxidase C-terminal dimerisation region AL072_09230 PF01243 Pyridoxamine 5'-phosphate oxidase AL072_09235 PF01545 Cation efflux family AL072_09235 PF16916 Dimerisation domain of Zinc Transporter AL072_09240 PF17200 Single Cache domain 2 AL072_09240 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain AL072_09240 PF00672 HAMP domain AL072_09245 PF12706 Beta-lactamase superfamily domain AL072_09245 PF00753 Metallo-beta-lactamase superfamily AL072_09250 PF03600 Citrate transporter AL072_09255 PF01966 HD domain AL072_09255 PF00672 HAMP domain AL072_09260 PF01924 Hydrogenase formation hypA family AL072_09270 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain AL072_09270 PF00672 HAMP domain AL072_09290 PF05974 Domain of unknown function (DUF892) AL072_09305 PF05443 ROS/MUCR transcriptional regulator protein AL072_09310 PF02502 Ribose/Galactose Isomerase AL072_09315 PF00464 Serine hydroxymethyltransferase AL072_09320 PF03477 ATP cone domain AL072_09325 PF03030 Inorganic H+ pyrophosphatase AL072_09335 PF00586 AIR synthase related protein, N-terminal domain AL072_09335 PF02769 AIR synthase related protein, C-terminal domain AL072_09340 PF01029 NusB family AL072_09345 PF00885 6,7-dimethyl-8-ribityllumazine synthase AL072_09350 PF00925 GTP cyclohydrolase II AL072_09350 PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase AL072_09355 PF00677 Lumazine binding domain AL072_09360 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region AL072_09360 PF01872 RibD C-terminal domain AL072_09380 PF01783 Ribosomal L32p protein family AL072_09385 PF02504 Fatty acid synthesis protein AL072_09390 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III AL072_09390 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal AL072_09395 PF00216 Bacterial DNA-binding protein AL072_09400 PF13411 MerR HTH family regulatory protein AL072_09460 PF01381 Helix-turn-helix AL072_09520 PF00589 Phage integrase family AL072_09520 PF02899 Phage integrase, N-terminal SAM-like domain AL072_09530 PF18755 Restriction Enzyme Adenine Methylase Associated AL072_09530 PF01555 DNA methylase AL072_09560 PF00589 Phage integrase family AL072_09560 PF02899 Phage integrase, N-terminal SAM-like domain AL072_09725 PF02566 OsmC-like protein AL072_09730 PF01047 MarR family AL072_09735 PF00583 Acetyltransferase (GNAT) family AL072_09740 PF00561 alpha/beta hydrolase fold AL072_09745 PF05175 Methyltransferase small domain AL072_09750 PF03960 ArsC family AL072_09755 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain AL072_09755 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain AL072_09770 PF00117 Glutamine amidotransferase class-I AL072_09770 PF00988 Carbamoyl-phosphate synthase small chain, CPSase domain AL072_09780 PF08275 DNA primase catalytic core, N-terminal domain AL072_09780 PF08278 DNA primase DnaG DnaB-binding AL072_09780 PF01807 CHC2 zinc finger AL072_09780 PF10410 DnaB-helicase binding domain of primase AL072_09780 PF13662 Toprim domain AL072_09785 PF04542 Sigma-70 region 2 AL072_09785 PF04539 Sigma-70 region 3 AL072_09785 PF04545 Sigma-70, region 4 AL072_09785 PF04546 Sigma-70, non-essential region AL072_09785 PF00140 Sigma-70 factor, region 1.2 AL072_09785 PF03979 Sigma-70 factor, region 1.1 AL072_09800 PF04542 Sigma-70 region 2 AL072_09800 PF08281 Sigma-70, region 4 AL072_09820 PF08240 Alcohol dehydrogenase GroES-like domain AL072_09820 PF13823 Alcohol dehydrogenase GroES-associated AL072_09820 PF00107 Zinc-binding dehydrogenase AL072_09830 PF00128 Alpha amylase, catalytic domain AL072_09830 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) AL072_09830 PF11941 Domain of unknown function (DUF3459) AL072_09850 PF01522 Polysaccharide deacetylase AL072_09865 PF05951 Bacterial protein of unknown function (DUF882) AL072_09890 PF01220 Dehydroquinase class II AL072_09895 PF00364 Biotin-requiring enzyme AL072_09900 PF02785 Biotin carboxylase C-terminal domain AL072_09900 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain AL072_09900 PF00289 Biotin carboxylase, N-terminal domain AL072_09910 PF08447 PAS fold AL072_09910 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain AL072_09920 PF00072 Response regulator receiver domain AL072_09930 PF04891 NifQ AL072_09940 PF01894 Uncharacterised protein family UPF0047 AL072_09945 PF13180 PDZ domain AL072_09950 PF00486 Transcriptional regulatory protein, C terminal AL072_09950 PF00072 Response regulator receiver domain AL072_09955 PF00672 HAMP domain AL072_09955 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AL072_09955 PF00512 His Kinase A (phospho-acceptor) domain AL072_09960 PF01594 AI-2E family transporter AL072_09965 PF07690 Major Facilitator Superfamily AL072_09970 PF01343 Peptidase family S49 AL072_09980 PF00486 Transcriptional regulatory protein, C terminal AL072_09980 PF00072 Response regulator receiver domain AL072_09985 PF00672 HAMP domain AL072_09985 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain AL072_09990 PF00155 Aminotransferase class I and II AL072_09995 PF03447 Homoserine dehydrogenase, NAD binding domain AL072_09995 PF00742 Homoserine dehydrogenase AL072_09995 PF01842 ACT domain AL072_10000 PF03320 Bacterial fructose-1,6-bisphosphatase, glpX-encoded AL072_10010 PF00512 His Kinase A (phospho-acceptor) domain AL072_10010 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AL072_10020 PF03091 CutA1 divalent ion tolerance protein AL072_10025 PF00994 Probable molybdopterin binding domain AL072_10025 PF03454 MoeA C-terminal region (domain IV) AL072_10025 PF03453 MoeA N-terminal region (domain I and II) AL072_10030 PF03466 LysR substrate binding domain AL072_10030 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AL072_10045 PF07703 Alpha-2-macroglobulin bait region domain AL072_10045 PF07678 A-macroglobulin TED domain AL072_10045 PF01835 MG2 domain AL072_10045 PF11974 Bacterial alpha-2-macroglobulin MG3 domain AL072_10045 PF17973 Bacterial Alpha-2-macroglobulin MG10 domain AL072_10045 PF00207 Alpha-2-macroglobulin family AL072_10045 PF17962 Bacterial macroglobulin domain 6 AL072_10045 PF17970 Bacterial Alpha-2-macroglobulin MG1 domain AL072_10045 PF17972 Bacterial Alpha-2-macroglobulin MG5 domain AL072_10050 PF00905 Penicillin binding protein transpeptidase domain AL072_10050 PF00912 Transglycosylase AL072_10050 PF06832 Penicillin-Binding Protein C-terminus Family AL072_10060 PF07731 Multicopper oxidase AL072_10060 PF07732 Multicopper oxidase AL072_10060 PF00394 Multicopper oxidase AL072_10065 PF04102 SlyX AL072_10070 PF01566 Natural resistance-associated macrophage protein AL072_10080 PF00588 SpoU rRNA Methylase family AL072_10090 PF00873 AcrB/AcrD/AcrF family AL072_10095 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion AL072_10105 PF00248 Aldo/keto reductase family AL072_10110 PF03976 Polyphosphate kinase 2 (PPK2) AL072_10115 PF03466 LysR substrate binding domain AL072_10115 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AL072_10120 PF08240 Alcohol dehydrogenase GroES-like domain AL072_10120 PF00107 Zinc-binding dehydrogenase AL072_10130 PF02867 Ribonucleotide reductase, barrel domain AL072_10130 PF03477 ATP cone domain AL072_10130 PF00317 Ribonucleotide reductase, all-alpha domain AL072_10140 PF03466 LysR substrate binding domain AL072_10140 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AL072_10145 PF01717 Cobalamin-independent synthase, Catalytic domain AL072_10145 PF08267 Cobalamin-independent synthase, N-terminal domain AL072_10150 PF06114 IrrE N-terminal-like domain AL072_10150 PF01381 Helix-turn-helix AL072_10150 PF09856 Predicted transcriptional regulator (DUF2083) AL072_10155 PF00285 Citrate synthase, C-terminal domain AL072_10160 PF00694 Aconitase C-terminal domain AL072_10160 PF00330 Aconitase family (aconitate hydratase) AL072_10165 PF04303 PrpF protein AL072_10180 PF08753 NikR C terminal nickel binding domain AL072_10180 PF01402 Ribbon-helix-helix protein, copG family AL072_10185 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle AL072_10190 PF00528 Binding-protein-dependent transport system inner membrane component AL072_10195 PF00528 Binding-protein-dependent transport system inner membrane component AL072_10200 PF00005 ABC transporter AL072_10205 PF00005 ABC transporter AL072_10220 PF03466 LysR substrate binding domain AL072_10220 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AL072_10225 PF00958 GMP synthase C terminal domain AL072_10225 PF00117 Glutamine amidotransferase class-I AL072_10225 PF02540 NAD synthase AL072_10230 PF00583 Acetyltransferase (GNAT) family AL072_10240 PF09312 SurA N-terminal domain AL072_10240 PF00639 PPIC-type PPIASE domain AL072_10245 PF04166 Pyridoxal phosphate biosynthetic protein PdxA AL072_10255 PF01192 RNA polymerase Rpb6 AL072_10260 PF13291 ACT domain AL072_10260 PF04607 Region found in RelA / SpoT proteins AL072_10260 PF02824 TGS domain AL072_10265 PF03740 Pyridoxal phosphate biosynthesis protein PdxJ AL072_10270 PF01648 4'-phosphopantetheinyl transferase superfamily AL072_10275 PF10502 Signal peptidase, peptidase S26 AL072_10280 PF14622 Ribonuclease-III-like AL072_10280 PF00035 Double-stranded RNA binding motif AL072_10285 PF01926 50S ribosome-binding GTPase AL072_10285 PF07650 KH domain AL072_10300 PF18125 RlmM ferredoxin-like domain AL072_10300 PF01728 FtsJ-like methyltransferase AL072_10305 PF00413 Matrixin AL072_10305 PF00353 RTX calcium-binding nonapeptide repeat (4 copies) AL072_10305 PF08548 Peptidase M10 serralysin C terminal AL072_10310 PF01734 Patatin-like phospholipase AL072_10325 PF13677 Membrane MotB of proton-channel complex MotA/MotB AL072_10325 PF00691 OmpA family AL072_10335 PF02469 Fasciclin domain AL072_10340 PF02705 K+ potassium transporter AL072_10345 PF00813 FliP family AL072_10360 PF01312 FlhB HrpN YscU SpaS Family AL072_10365 PF00460 Flagella basal body rod protein AL072_10370 PF06429 Flagellar basal body rod FlgEFG protein C-terminal AL072_10375 PF02049 Flagellar hook-basal body complex protein FliE AL072_10380 PF01313 Bacterial export proteins, family 3 AL072_10385 PF01311 Bacterial export proteins, family 1 AL072_10390 PF01312 FlhB HrpN YscU SpaS Family AL072_10395 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AL072_10395 PF00512 His Kinase A (phospho-acceptor) domain AL072_10395 PF08448 PAS fold AL072_10395 PF00072 Response regulator receiver domain AL072_10395 PF13188 PAS domain AL072_10400 PF00154 recA bacterial DNA recombination protein AL072_10430 PF17757 UvrB interaction domain AL072_10430 PF02559 CarD-like/TRCF domain AL072_10430 PF03461 TRCF domain AL072_10430 PF00270 DEAD/DEAH box helicase AL072_10430 PF00271 Helicase conserved C-terminal domain AL072_10440 PF00893 Small Multidrug Resistance protein AL072_10445 PF01966 HD domain AL072_10445 PF03445 Putative nucleotidyltransferase DUF294 AL072_10445 PF08335 GlnD PII-uridylyltransferase AL072_10460 PF01523 Putative modulator of DNA gyrase AL072_10470 PF13426 PAS domain AL072_10470 PF08447 PAS fold AL072_10470 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain AL072_10475 PF00378 Enoyl-CoA hydratase/isomerase AL072_10485 PF01048 Phosphorylase superfamily AL072_10495 PF03480 Bacterial extracellular solute-binding protein, family 7 AL072_10500 PF07977 FabA-like domain AL072_10505 PF00440 Bacterial regulatory proteins, tetR family AL072_10535 PF02119 Flagellar P-ring protein AL072_10540 PF10768 Class II flagellar assembly regulator AL072_10545 PF01258 Prokaryotic dksA/traR C4-type zinc finger AL072_10550 PF13282 Domain of unknown function (DUF4070) AL072_10550 PF02310 B12 binding domain AL072_10550 PF04055 Radical SAM superfamily AL072_10565 PF02107 Flagellar L-ring protein AL072_10575 PF00460 Flagella basal body rod protein AL072_10575 PF06429 Flagellar basal body rod FlgEFG protein C-terminal AL072_10580 PF06429 Flagellar basal body rod FlgEFG protein C-terminal AL072_10580 PF00460 Flagella basal body rod protein AL072_10590 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term AL072_10590 PF02154 Flagellar motor switch protein FliM AL072_10605 PF00521 DNA gyrase/topoisomerase IV, subunit A AL072_10605 PF03989 DNA gyrase C-terminal domain, beta-propeller AL072_10610 PF11967 Recombination protein O N terminal AL072_10610 PF02565 Recombination protein O C terminal AL072_10615 PF00563 EAL domain AL072_10615 PF00990 Diguanylate cyclase, GGDEF domain AL072_10615 PF03707 Bacterial signalling protein N terminal repeat AL072_10640 PF03480 Bacterial extracellular solute-binding protein, family 7 AL072_10645 PF03099 Biotin/lipoate A/B protein ligase family AL072_10645 PF12706 Beta-lactamase superfamily domain AL072_10650 PF01026 TatD related DNase AL072_10655 PF09334 tRNA synthetases class I (M) AL072_10660 PF12169 DNA polymerase III subunits gamma and tau domain III AL072_10665 PF02223 Thymidylate kinase AL072_10670 PF07943 Penicillin-binding protein 5, C-terminal domain AL072_10670 PF00768 D-alanyl-D-alanine carboxypeptidase AL072_10675 PF05036 Sporulation related domain AL072_10675 PF03330 Lytic transglycolase AL072_10715 PF06055 Exopolysaccharide synthesis, ExoD AL072_10720 PF00005 ABC transporter AL072_10720 PF12848 ABC transporter AL072_10725 PF00334 Nucleoside diphosphate kinase AL072_10735 PF00512 His Kinase A (phospho-acceptor) domain AL072_10735 PF08448 PAS fold AL072_10735 PF00072 Response regulator receiver domain AL072_10735 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AL072_10735 PF13188 PAS domain AL072_10765 PF00069 Protein kinase domain AL072_10765 PF03793 PASTA domain AL072_10775 PF00691 OmpA family AL072_10775 PF13677 Membrane MotB of proton-channel complex MotA/MotB AL072_10790 PF13847 Methyltransferase domain AL072_10790 PF10119 Predicted methyltransferase regulatory domain AL072_10850 PF17871 AAA lid domain AL072_10850 PF00004 ATPase family associated with various cellular activities (AAA) AL072_10850 PF07724 AAA domain (Cdc48 subfamily) AL072_10850 PF10431 C-terminal, D2-small domain, of ClpB protein AL072_10860 PF04717 Type VI secretion system, phage-baseplate injector AL072_10910 PF00672 HAMP domain AL072_10910 PF07228 Stage II sporulation protein E (SpoIIE) AL072_10915 PF01740 STAS domain AL072_10920 PF13188 PAS domain AL072_10920 PF00072 Response regulator receiver domain AL072_10920 PF08448 PAS fold AL072_10920 PF00512 His Kinase A (phospho-acceptor) domain AL072_10920 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AL072_10930 PF00440 Bacterial regulatory proteins, tetR family AL072_10935 PF00529 HlyD membrane-fusion protein of T1SS AL072_10935 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion AL072_10940 PF00873 AcrB/AcrD/AcrF family AL072_10950 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AL072_10950 PF02743 Cache domain AL072_10950 PF00512 His Kinase A (phospho-acceptor) domain AL072_10955 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AL072_10955 PF00072 Response regulator receiver domain AL072_10955 PF13188 PAS domain AL072_10955 PF08448 PAS fold AL072_10955 PF00512 His Kinase A (phospho-acceptor) domain AL072_10960 PF06745 KaiC AL072_10970 PF00672 HAMP domain AL072_10970 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain AL072_10985 PF02954 Bacterial regulatory protein, Fis family AL072_10985 PF00158 Sigma-54 interaction domain AL072_10985 PF00072 Response regulator receiver domain AL072_11000 PF13406 Transglycosylase SLT domain AL072_11025 PF10415 Fumarase C C-terminus AL072_11025 PF00206 Lyase AL072_11045 PF00990 Diguanylate cyclase, GGDEF domain AL072_11045 PF13426 PAS domain AL072_11045 PF00563 EAL domain AL072_11050 PF17769 Phosphoribosylaminoimidazole carboxylase C-terminal domain AL072_11050 PF02222 ATP-grasp domain AL072_11055 PF00731 AIR carboxylase AL072_11070 PF00365 Phosphofructokinase AL072_11095 PF00484 Carbonic anhydrase AL072_11100 PF02441 Flavoprotein AL072_11110 PF00107 Zinc-binding dehydrogenase AL072_11110 PF16197 Ketoacyl-synthetase C-terminal extension AL072_11110 PF00698 Acyl transferase domain AL072_11110 PF00109 Beta-ketoacyl synthase, N-terminal domain AL072_11110 PF02801 Beta-ketoacyl synthase, C-terminal domain AL072_11110 PF08240 Alcohol dehydrogenase GroES-like domain AL072_11110 PF08659 KR domain AL072_11110 PF00550 Phosphopantetheine attachment site AL072_11110 PF14765 Polyketide synthase dehydratase AL072_11145 PF03807 NADP oxidoreductase coenzyme F420-dependent AL072_11145 PF14748 Pyrroline-5-carboxylate reductase dimerisation AL072_11170 PF01588 Putative tRNA binding domain AL072_11175 PF00672 HAMP domain AL072_11175 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain AL072_11185 PF00196 Bacterial regulatory proteins, luxR family AL072_11185 PF00072 Response regulator receiver domain AL072_11200 PF01926 50S ribosome-binding GTPase AL072_11200 PF14714 KH-domain-like of EngA bacterial GTPase enzymes, C-terminal AL072_11215 PF00557 Metallopeptidase family M24 AL072_11220 PF18073 Rubredoxin metal binding domain AL072_11220 PF06745 KaiC AL072_11230 PF13537 Glutamine amidotransferase domain AL072_11230 PF00156 Phosphoribosyl transferase domain AL072_11235 PF00106 short chain dehydrogenase AL072_11245 PF01624 MutS domain I AL072_11245 PF05192 MutS domain III AL072_11245 PF05188 MutS domain II AL072_11245 PF00488 MutS domain V AL072_11245 PF05190 MutS family domain IV AL072_11265 PF01966 HD domain AL072_11265 PF08335 GlnD PII-uridylyltransferase AL072_11265 PF01909 Nucleotidyltransferase domain AL072_11270 PF13746 4Fe-4S dicluster domain AL072_11270 PF12801 4Fe-4S binding domain AL072_11270 PF11614 IG-like fold at C-terminal of FixG, putative oxidoreductase AL072_11275 PF13291 ACT domain AL072_11275 PF02824 TGS domain AL072_11275 PF04607 Region found in RelA / SpoT proteins AL072_11295 PF12823 Domain of unknown function (DUF3817) AL072_11315 PF00990 Diguanylate cyclase, GGDEF domain AL072_11325 PF00180 Isocitrate/isopropylmalate dehydrogenase AL072_11325 PF18324 Hypothetical protein TT1725 AL072_11330 PF04542 Sigma-70 region 2 AL072_11330 PF08281 Sigma-70, region 4 AL072_11350 PF01145 SPFH domain / Band 7 family AL072_11350 PF16200 C-terminal region of band_7 AL072_11360 PF00180 Isocitrate/isopropylmalate dehydrogenase AL072_11370 PF01281 Ribosomal protein L9, N-terminal domain AL072_11370 PF03948 Ribosomal protein L9, C-terminal domain AL072_11380 PF01084 Ribosomal protein S18 AL072_11385 PF01250 Ribosomal protein S6 AL072_11395 PF00698 Acyl transferase domain AL072_11405 PF00550 Phosphopantetheine attachment site AL072_11410 PF00109 Beta-ketoacyl synthase, N-terminal domain AL072_11410 PF02801 Beta-ketoacyl synthase, C-terminal domain AL072_11415 PF02618 YceG-like family AL072_11430 PF01638 HxlR-like helix-turn-helix AL072_11440 PF00271 Helicase conserved C-terminal domain AL072_11440 PF00270 DEAD/DEAH box helicase AL072_11440 PF17191 RecG wedge domain AL072_11470 PF01503 Phosphoribosyl-ATP pyrophosphohydrolase AL072_11475 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AL072_11475 PF07568 Histidine kinase AL072_11475 PF12282 Signal transduction histidine kinase AL072_11480 PF11849 Domain of unknown function (DUF3369) AL072_11485 PF00486 Transcriptional regulatory protein, C terminal AL072_11485 PF00072 Response regulator receiver domain AL072_11500 PF17862 AAA+ lid domain AL072_11500 PF06480 FtsH Extracellular AL072_11500 PF01434 Peptidase family M41 AL072_11500 PF00004 ATPase family associated with various cellular activities (AAA) AL072_11505 PF00005 ABC transporter AL072_11510 PF00528 Binding-protein-dependent transport system inner membrane component AL072_11515 PF09084 NMT1/THI5 like AL072_11520 PF03960 ArsC family AL072_11525 PF03061 Thioesterase superfamily AL072_11530 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AL072_11530 PF00986 DNA gyrase B subunit, carboxyl terminus AL072_11530 PF01751 Toprim domain AL072_11530 PF00204 DNA gyrase B AL072_11540 PF12697 Alpha/beta hydrolase family AL072_11550 PF00271 Helicase conserved C-terminal domain AL072_11550 PF00270 DEAD/DEAH box helicase AL072_11560 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AL072_11560 PF03459 TOBE domain AL072_11570 PF17200 Single Cache domain 2 AL072_11570 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain AL072_11570 PF00672 HAMP domain AL072_11580 PF00625 Guanylate kinase AL072_11585 PF03755 YicC-like family, N-terminal region AL072_11585 PF08340 Domain of unknown function (DUF1732) AL072_11590 PF00106 short chain dehydrogenase AL072_11600 PF00570 HRDC domain AL072_11600 PF01612 3'-5' exonuclease AL072_11605 PF00994 Probable molybdopterin binding domain AL072_11605 PF03454 MoeA C-terminal region (domain IV) AL072_11605 PF03453 MoeA N-terminal region (domain I and II) AL072_11610 PF01967 MoaC family AL072_11615 PF00583 Acetyltransferase (GNAT) family AL072_11620 PF00218 Indole-3-glycerol phosphate synthase AL072_11625 PF02885 Glycosyl transferase family, helical bundle domain AL072_11625 PF00591 Glycosyl transferase family, a/b domain AL072_11630 PF00117 Glutamine amidotransferase class-I AL072_11660 PF00701 Dihydrodipicolinate synthetase family AL072_11665 PF01668 SmpB protein AL072_11670 PF08468 Methyltransferase small domain N-terminal AL072_11670 PF05175 Methyltransferase small domain AL072_11675 PF00248 Aldo/keto reductase family AL072_11690 PF01161 Phosphatidylethanolamine-binding protein AL072_11695 PF00490 Delta-aminolevulinic acid dehydratase AL072_11700 PF00149 Calcineurin-like phosphoesterase AL072_11705 PF00781 Diacylglycerol kinase catalytic domain AL072_11710 PF00378 Enoyl-CoA hydratase/isomerase AL072_11715 PF12802 MarR family AL072_11720 PF00999 Sodium/hydrogen exchanger family AL072_11730 PF02653 Branched-chain amino acid transport system / permease component AL072_11745 PF04378 Ribosomal RNA large subunit methyltransferase D, RlmJ AL072_11775 PF04542 Sigma-70 region 2 AL072_11775 PF08281 Sigma-70, region 4 AL072_11780 PF00583 Acetyltransferase (GNAT) family AL072_11785 PF00343 Carbohydrate phosphorylase AL072_11790 PF02774 Semialdehyde dehydrogenase, dimerisation domain AL072_11790 PF01118 Semialdehyde dehydrogenase, NAD binding domain AL072_11800 PF16658 Class II release factor RF3, C-terminal domain AL072_11800 PF00009 Elongation factor Tu GTP binding domain AL072_11805 PF02743 Cache domain AL072_11805 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AL072_11805 PF00512 His Kinase A (phospho-acceptor) domain AL072_11810 PF00486 Transcriptional regulatory protein, C terminal AL072_11810 PF00072 Response regulator receiver domain AL072_11815 PF08379 Bacterial transglutaminase-like N-terminal region AL072_11815 PF01841 Transglutaminase-like superfamily AL072_11820 PF14403 Circularly permuted ATP-grasp type 2 AL072_11820 PF04168 A predicted alpha-helical domain with a conserved ER motif. AL072_11845 PF00069 Protein kinase domain AL072_11850 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD AL072_11860 PF13617 YnbE-like lipoprotein AL072_11880 PF04453 LPS transport system D AL072_11885 PF03435 Saccharopine dehydrogenase NADP binding domain AL072_11885 PF16653 Saccharopine dehydrogenase C-terminal domain AL072_11895 PF03079 ARD/ARD' family AL072_11900 PF07690 Major Facilitator Superfamily AL072_11905 PF02403 Seryl-tRNA synthetase N-terminal domain AL072_11905 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) AL072_11910 PF01975 Survival protein SurE AL072_11920 PF01476 LysM domain AL072_11920 PF01551 Peptidase family M23 AL072_11930 PF02699 Preprotein translocase subunit AL072_11935 PF07549 SecD/SecF GG Motif AL072_11935 PF02355 Protein export membrane protein AL072_11940 PF07549 SecD/SecF GG Motif AL072_11940 PF02355 Protein export membrane protein AL072_11945 PF04430 Protein of unknown function (DUF498/DUF598) AL072_11950 PF02777 Iron/manganese superoxide dismutases, C-terminal domain AL072_11950 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain AL072_11955 PF01593 Flavin containing amine oxidoreductase AL072_11975 PF01134 Glucose inhibited division protein A AL072_11985 PF17760 UvrA interaction domain AL072_11985 PF17755 UvrA DNA-binding domain AL072_12000 PF13089 Polyphosphate kinase N-terminal domain AL072_12000 PF17941 Polyphosphate kinase C-terminal domain 1 AL072_12000 PF02503 Polyphosphate kinase middle domain AL072_12000 PF13090 Polyphosphate kinase C-terminal domain 2 AL072_12005 PF02541 Ppx/GppA phosphatase family AL072_12015 PF12627 Probable RNA and SrmB- binding site of polymerase A AL072_12015 PF13735 tRNA nucleotidyltransferase domain 2 putative AL072_12015 PF01743 Poly A polymerase head domain AL072_12030 PF07726 ATPase family associated with various cellular activities (AAA) AL072_12030 PF17863 AAA lid domain AL072_12055 PF10011 Predicted membrane protein (DUF2254) AL072_12060 PF04239 Protein of unknown function (DUF421) AL072_12075 PF08241 Methyltransferase domain AL072_12080 PF07690 Major Facilitator Superfamily AL072_12085 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AL072_12085 PF03466 LysR substrate binding domain AL072_12090 PF00436 Single-strand binding protein family AL072_12095 PF00072 Response regulator receiver domain AL072_12120 PF00850 Histone deacetylase domain AL072_12125 PF00005 ABC transporter AL072_12130 PF00528 Binding-protein-dependent transport system inner membrane component AL072_12135 PF09084 NMT1/THI5 like AL072_12145 PF00459 Inositol monophosphatase family AL072_12160 PF16360 GTP-binding GTPase Middle Region AL072_12160 PF13167 GTP-binding GTPase N-terminal AL072_12160 PF01926 50S ribosome-binding GTPase AL072_12165 PF17209 Hfq protein AL072_12175 PF01850 PIN domain AL072_12185 PF00158 Sigma-54 interaction domain AL072_12185 PF00072 Response regulator receiver domain AL072_12185 PF02954 Bacterial regulatory protein, Fis family AL072_12190 PF00672 HAMP domain AL072_12190 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AL072_12195 PF00158 Sigma-54 interaction domain AL072_12195 PF00072 Response regulator receiver domain AL072_12195 PF02954 Bacterial regulatory protein, Fis family AL072_12200 PF00989 PAS fold AL072_12200 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AL072_12200 PF00512 His Kinase A (phospho-acceptor) domain AL072_12205 PF01207 Dihydrouridine synthase (Dus) AL072_12210 PF01578 Cytochrome C assembly protein AL072_12215 PF01128 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase AL072_12215 PF02542 YgbB family AL072_12220 PF02464 Competence-damaged protein AL072_12220 PF18146 Damage-inducible protein CinA KH domain AL072_12220 PF00994 Probable molybdopterin binding domain AL072_12225 PF01361 Tautomerase enzyme AL072_12230 PF03364 Polyketide cyclase / dehydrase and lipid transport AL072_12235 PF16881 N-terminal domain of lipoyl synthase of Radical_SAM family AL072_12235 PF04055 Radical SAM superfamily AL072_12245 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain AL072_12245 PF07992 Pyridine nucleotide-disulphide oxidoreductase AL072_12255 PF02817 e3 binding domain AL072_12255 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) AL072_12255 PF00364 Biotin-requiring enzyme AL072_12260 PF00364 Biotin-requiring enzyme AL072_12260 PF02780 Transketolase, C-terminal domain AL072_12260 PF02779 Transketolase, pyrimidine binding domain AL072_12265 PF00676 Dehydrogenase E1 component AL072_12280 PF03459 TOBE domain AL072_12280 PF00005 ABC transporter AL072_12285 PF00528 Binding-protein-dependent transport system inner membrane component AL072_12295 PF00834 Ribulose-phosphate 3 epimerase family AL072_12300 PF04226 Transglycosylase associated protein AL072_12305 PF00072 Response regulator receiver domain AL072_12305 PF03861 ANTAR domain AL072_12315 PF02586 SOS response associated peptidase (SRAP) AL072_12320 PF01315 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain AL072_12320 PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase AL072_12325 PF01590 GAF domain AL072_12325 PF00990 Diguanylate cyclase, GGDEF domain AL072_12325 PF00989 PAS fold AL072_12325 PF00563 EAL domain AL072_12335 PF00459 Inositol monophosphatase family AL072_12340 PF04305 Protein of unknown function (DUF455) AL072_12345 PF01636 Phosphotransferase enzyme family AL072_12350 PF00075 RNase H AL072_12355 PF08534 Redoxin AL072_12360 PF08274 PhnA Zinc-Ribbon AL072_12360 PF03831 PhnA domain AL072_12365 PF02683 Cytochrome C biogenesis protein transmembrane region AL072_12365 PF11412 Disulphide bond corrector protein DsbC AL072_12370 PF02622 Uncharacterized ACR, COG1678 AL072_12375 PF02391 MoaE protein AL072_12380 PF02597 ThiS family AL072_12385 PF00994 Probable molybdopterin binding domain AL072_12385 PF03453 MoeA N-terminal region (domain I and II) AL072_12385 PF03454 MoeA C-terminal region (domain IV) AL072_12390 PF13419 Haloacid dehalogenase-like hydrolase AL072_12395 PF03205 Molybdopterin guanine dinucleotide synthesis protein B AL072_12400 PF01066 CDP-alcohol phosphatidyltransferase AL072_12405 PF02151 UvrB/uvrC motif AL072_12405 PF01541 GIY-YIG catalytic domain AL072_12405 PF12826 Helix-hairpin-helix motif AL072_12405 PF08459 UvrC Helix-hairpin-helix N-terminal AL072_12440 PF02653 Branched-chain amino acid transport system / permease component AL072_12445 PF00005 ABC transporter AL072_12450 PF02254 TrkA-N domain AL072_12450 PF00999 Sodium/hydrogen exchanger family AL072_12455 PF03239 Iron permease FTR1 family AL072_12480 PF03466 LysR substrate binding domain AL072_12480 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AL072_12485 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain AL072_12485 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain AL072_12490 PF01979 Amidohydrolase family AL072_12495 PF02660 Glycerol-3-phosphate acyltransferase AL072_12505 PF01965 DJ-1/PfpI family AL072_12510 PF00890 FAD binding domain AL072_12510 PF04205 FMN-binding domain AL072_12525 PF00501 AMP-binding enzyme AL072_12525 PF13193 AMP-binding enzyme C-terminal domain AL072_12535 PF03741 Integral membrane protein TerC family AL072_12540 PF00216 Bacterial DNA-binding protein AL072_12545 PF05443 ROS/MUCR transcriptional regulator protein AL072_12550 PF00140 Sigma-70 factor, region 1.2 AL072_12550 PF04542 Sigma-70 region 2 AL072_12550 PF04545 Sigma-70, region 4 AL072_12580 PF01464 Transglycosylase SLT domain AL072_12585 PF04851 Type III restriction enzyme, res subunit AL072_12585 PF02151 UvrB/uvrC motif AL072_12585 PF12344 Ultra-violet resistance protein B AL072_12585 PF17757 UvrB interaction domain AL072_12585 PF00271 Helicase conserved C-terminal domain AL072_12590 PF00717 Peptidase S24-like AL072_12590 PF01726 LexA DNA binding domain AL072_12595 PF00753 Metallo-beta-lactamase superfamily AL072_12595 PF13567 Domain of unknown function (DUF4131) AL072_12595 PF03772 Competence protein AL072_12600 PF00749 tRNA synthetases class I (E and Q), catalytic domain AL072_12605 PF00285 Citrate synthase, C-terminal domain AL072_12615 PF00873 AcrB/AcrD/AcrF family AL072_12625 PF07992 Pyridine nucleotide-disulphide oxidoreductase AL072_12630 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily AL072_12635 PF02684 Lipid-A-disaccharide synthetase AL072_12640 PF06230 LpxI C-terminal domain AL072_12640 PF17930 LpxI N-terminal domain AL072_12645 PF13720 Udp N-acetylglucosamine O-acyltransferase; Domain 2 AL072_12645 PF00132 Bacterial transferase hexapeptide (six repeats) AL072_12650 PF07977 FabA-like domain AL072_12660 PF07244 Surface antigen variable number repeat AL072_12660 PF01103 Surface antigen AL072_12665 PF17820 PDZ domain AL072_12665 PF02163 Peptidase family M50 AL072_12670 PF08436 1-deoxy-D-xylulose 5-phosphate reductoisomerase C-terminal domain AL072_12670 PF02670 1-deoxy-D-xylulose 5-phosphate reductoisomerase AL072_12670 PF13288 DXP reductoisomerase C-terminal domain AL072_12680 PF01255 Putative undecaprenyl diphosphate synthase AL072_12685 PF01765 Ribosome recycling factor AL072_12690 PF00696 Amino acid kinase family AL072_12695 PF00889 Elongation factor TS AL072_12700 PF00318 Ribosomal protein S2 AL072_12705 PF01336 OB-fold nucleic acid binding domain AL072_12705 PF02938 GAD domain AL072_12705 PF00152 tRNA synthetases class II (D, K and N) AL072_12730 PF00266 Aminotransferase class-V AL072_12735 PF02347 Glycine cleavage system P-protein AL072_12740 PF01597 Glycine cleavage H-protein AL072_12745 PF08669 Glycine cleavage T-protein C-terminal barrel domain AL072_12745 PF01571 Aminomethyltransferase folate-binding domain AL072_12765 PF02401 LytB protein AL072_12770 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain AL072_12770 PF07685 CobB/CobQ-like glutamine amidotransferase domain AL072_12775 PF02572 ATP:corrinoid adenosyltransferase BtuR/CobO/CobP AL072_12775 PF12557 Cob(I)alamin adenosyltransferase N terminal AL072_12780 PF02283 Cobinamide kinase / cobinamide phosphate guanyltransferase AL072_12805 PF01554 MatE AL072_12810 PF03989 DNA gyrase C-terminal domain, beta-propeller AL072_12810 PF00521 DNA gyrase/topoisomerase IV, subunit A AL072_12815 PF01467 Cytidylyltransferase-like AL072_12825 PF00872 Transposase, Mutator family AL072_12850 PF00005 ABC transporter AL072_12850 PF02687 FtsX-like permease family AL072_12850 PF12704 MacB-like periplasmic core domain AL072_12855 PF00005 ABC transporter AL072_12870 PF00793 DAHP synthetase I family AL072_12875 PF01738 Dienelactone hydrolase family AL072_12880 PF06418 CTP synthase N-terminus AL072_12880 PF00117 Glutamine amidotransferase class-I AL072_12885 PF03840 Preprotein translocase SecG subunit AL072_12890 PF00121 Triosephosphate isomerase AL072_12900 PF12802 MarR family AL072_12910 PF00072 Response regulator receiver domain AL072_12910 PF00486 Transcriptional regulatory protein, C terminal AL072_12915 PF00512 His Kinase A (phospho-acceptor) domain AL072_12915 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AL072_12915 PF00672 HAMP domain AL072_12920 PF00072 Response regulator receiver domain AL072_12920 PF00196 Bacterial regulatory proteins, luxR family AL072_12925 PF13180 PDZ domain AL072_12930 PF01145 SPFH domain / Band 7 family AL072_12935 PF01145 SPFH domain / Band 7 family AL072_12935 PF12221 Bacterial membrane protein N terminal AL072_12940 PF10609 NUBPL iron-transfer P-loop NTPase AL072_12945 PF00012 Hsp70 protein AL072_12950 PF00106 short chain dehydrogenase AL072_12975 PF01464 Transglycosylase SLT domain AL072_12975 PF00497 Bacterial extracellular solute-binding proteins, family 3 AL072_12980 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) AL072_12980 PF00672 HAMP domain AL072_12980 PF01627 Hpt domain AL072_12980 PF00072 Response regulator receiver domain AL072_12980 PF00512 His Kinase A (phospho-acceptor) domain AL072_12980 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AL072_12990 PF07228 Stage II sporulation protein E (SpoIIE) AL072_12990 PF13426 PAS domain AL072_13000 PF00990 Diguanylate cyclase, GGDEF domain AL072_13000 PF17151 Periplasmic sensor domain AL072_13005 PF00155 Aminotransferase class I and II AL072_13010 PF03186 CobD/Cbib protein AL072_13020 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AL072_13020 PF00989 PAS fold AL072_13020 PF00512 His Kinase A (phospho-acceptor) domain AL072_13025 PF01804 Penicillin amidase AL072_13030 PF13291 ACT domain AL072_13030 PF00291 Pyridoxal-phosphate dependent enzyme AL072_13035 PF00005 ABC transporter AL072_13055 PF02233 NAD(P) transhydrogenase beta subunit AL072_13060 PF12769 4TM region of pyridine nucleotide transhydrogenase, mitoch AL072_13065 PF05222 Alanine dehydrogenase/PNT, N-terminal domain AL072_13065 PF01262 Alanine dehydrogenase/PNT, C-terminal domain AL072_13070 PF10073 Uncharacterized protein conserved in bacteria (DUF2312) AL072_13075 PF00117 Glutamine amidotransferase class-I AL072_13075 PF04715 Anthranilate synthase component I, N terminal region AL072_13075 PF00425 chorismate binding enzyme AL072_13080 PF01895 PhoU domain AL072_13095 PF00795 Carbon-nitrogen hydrolase AL072_13105 PF00850 Histone deacetylase domain AL072_13115 PF00535 Glycosyl transferase family 2 AL072_13120 PF01381 Helix-turn-helix AL072_13155 PF13393 Histidyl-tRNA synthetase AL072_13155 PF03129 Anticodon binding domain AL072_13160 PF12802 MarR family AL072_13165 PF00106 short chain dehydrogenase AL072_13175 PF01594 AI-2E family transporter AL072_13180 PF01066 CDP-alcohol phosphatidyltransferase AL072_13190 PF02769 AIR synthase related protein, C-terminal domain AL072_13190 PF00586 AIR synthase related protein, N-terminal domain AL072_13195 PF00551 Formyl transferase AL072_13200 PF10458 Valyl tRNA synthetase tRNA binding arm AL072_13200 PF08264 Anticodon-binding domain of tRNA AL072_13200 PF00133 tRNA synthetases class I (I, L, M and V) AL072_13210 PF02321 Outer membrane efflux protein AL072_13245 PF00595 PDZ domain AL072_13250 PF00293 NUDIX domain AL072_13255 PF00571 CBS domain AL072_13255 PF00291 Pyridoxal-phosphate dependent enzyme AL072_13260 PF02272 DHHA1 domain AL072_13260 PF01411 tRNA synthetases class II (A) AL072_13260 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain AL072_13265 PF00581 Rhodanese-like domain AL072_13270 PF00583 Acetyltransferase (GNAT) family AL072_13285 PF06629 MltA-interacting protein MipA AL072_13290 PF00155 Aminotransferase class I and II AL072_13295 PF00005 ABC transporter AL072_13300 PF00528 Binding-protein-dependent transport system inner membrane component AL072_13305 PF00528 Binding-protein-dependent transport system inner membrane component AL072_13310 PF00497 Bacterial extracellular solute-binding proteins, family 3 AL072_13315 PF01053 Cys/Met metabolism PLP-dependent enzyme AL072_13320 PF01502 Phosphoribosyl-AMP cyclohydrolase AL072_13335 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component AL072_13345 PF00672 HAMP domain AL072_13345 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain AL072_13350 PF04376 Arginine-tRNA-protein transferase, N terminus AL072_13350 PF04377 Arginine-tRNA-protein transferase, C terminus AL072_13355 PF04168 A predicted alpha-helical domain with a conserved ER motif. AL072_13355 PF14403 Circularly permuted ATP-grasp type 2 AL072_13360 PF14403 Circularly permuted ATP-grasp type 2 AL072_13365 PF13677 Membrane MotB of proton-channel complex MotA/MotB AL072_13365 PF00691 OmpA family AL072_13370 PF01613 Flavin reductase like domain AL072_13390 PF00501 AMP-binding enzyme AL072_13390 PF13193 AMP-binding enzyme C-terminal domain AL072_13395 PF13411 MerR HTH family regulatory protein AL072_13405 PF01012 Electron transfer flavoprotein domain AL072_13410 PF00766 Electron transfer flavoprotein FAD-binding domain AL072_13410 PF01012 Electron transfer flavoprotein domain AL072_13420 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AL072_13420 PF00512 His Kinase A (phospho-acceptor) domain AL072_13425 PF03023 Lipid II flippase MurJ AL072_13430 PF01053 Cys/Met metabolism PLP-dependent enzyme AL072_13440 PF01545 Cation efflux family AL072_13445 PF02566 OsmC-like protein AL072_13450 PF06082 Exopolysaccharide biosynthesis protein YbjH AL072_13460 PF08281 Sigma-70, region 4 AL072_13460 PF04542 Sigma-70 region 2 AL072_13465 PF01464 Transglycosylase SLT domain AL072_13480 PF01209 ubiE/COQ5 methyltransferase family AL072_13500 PF00528 Binding-protein-dependent transport system inner membrane component AL072_13505 PF00999 Sodium/hydrogen exchanger family AL072_13505 PF02080 TrkA-C domain AL072_13505 PF03471 Transporter associated domain AL072_13520 PF01734 Patatin-like phospholipase AL072_13525 PF00664 ABC transporter transmembrane region AL072_13525 PF00005 ABC transporter AL072_13530 PF08402 TOBE domain AL072_13530 PF00005 ABC transporter AL072_13540 PF08447 PAS fold AL072_13540 PF00990 Diguanylate cyclase, GGDEF domain AL072_13540 PF00563 EAL domain AL072_13540 PF08448 PAS fold AL072_13550 PF02694 Uncharacterised BCR, YnfA/UPF0060 family AL072_13565 PF05532 CsbD-like AL072_13570 PF13145 PPIC-type PPIASE domain AL072_13575 PF04715 Anthranilate synthase component I, N terminal region AL072_13575 PF00425 chorismate binding enzyme AL072_13580 PF02074 Carboxypeptidase Taq (M32) metallopeptidase AL072_13595 PF00510 Cytochrome c oxidase subunit III AL072_13600 PF04442 Cytochrome c oxidase assembly protein CtaG/Cox11 AL072_13610 PF01040 UbiA prenyltransferase family AL072_13615 PF00115 Cytochrome C and Quinol oxidase polypeptide I AL072_13620 PF02790 Cytochrome C oxidase subunit II, transmembrane domain AL072_13620 PF00116 Cytochrome C oxidase subunit II, periplasmic domain AL072_13625 PF02481 DNA recombination-mediator protein A AL072_13625 PF17782 DprA winged helix domain AL072_13630 PF13368 Topoisomerase C-terminal repeat AL072_13630 PF01396 Topoisomerase DNA binding C4 zinc finger AL072_13630 PF01751 Toprim domain AL072_13630 PF01131 DNA topoisomerase AL072_13635 PF00378 Enoyl-CoA hydratase/isomerase AL072_13640 PF13380 CoA binding domain AL072_13645 PF01053 Cys/Met metabolism PLP-dependent enzyme AL072_13655 PF00472 RF-1 domain AL072_13660 PF00398 Ribosomal RNA adenine dimethylase AL072_13675 PF12833 Helix-turn-helix domain AL072_13685 PF00176 SNF2 family N-terminal domain AL072_13685 PF04434 SWIM zinc finger AL072_13685 PF00271 Helicase conserved C-terminal domain AL072_13695 PF00072 Response regulator receiver domain AL072_13695 PF00990 Diguanylate cyclase, GGDEF domain AL072_13700 PF00072 Response regulator receiver domain AL072_13705 PF05231 MASE1 AL072_13705 PF00563 EAL domain AL072_13705 PF08447 PAS fold AL072_13705 PF08448 PAS fold AL072_13705 PF13426 PAS domain AL072_13705 PF00990 Diguanylate cyclase, GGDEF domain AL072_13710 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain AL072_13710 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain AL072_13725 PF16193 AAA C-terminal domain AL072_13725 PF00004 ATPase family associated with various cellular activities (AAA) AL072_13725 PF12002 MgsA AAA+ ATPase C terminal AL072_13740 PF09335 SNARE associated Golgi protein AL072_13745 PF01196 Ribosomal protein L17 AL072_13750 PF01000 RNA polymerase Rpb3/RpoA insert domain AL072_13750 PF03118 Bacterial RNA polymerase, alpha chain C terminal domain AL072_13750 PF01193 RNA polymerase Rpb3/Rpb11 dimerisation domain AL072_13755 PF00411 Ribosomal protein S11 AL072_13760 PF00416 Ribosomal protein S13/S18 AL072_13765 PF00224 Pyruvate kinase, barrel domain AL072_13765 PF02887 Pyruvate kinase, alpha/beta domain AL072_13775 PF03764 Elongation factor G, domain IV AL072_13775 PF14492 Elongation Factor G, domain II AL072_13775 PF00679 Elongation factor G C-terminus AL072_13775 PF03144 Elongation factor Tu domain 2 AL072_13775 PF00009 Elongation factor Tu GTP binding domain AL072_13780 PF01042 Endoribonuclease L-PSP AL072_13785 PF00089 Trypsin AL072_13790 PF01131 DNA topoisomerase AL072_13790 PF01751 Toprim domain AL072_13835 PF00216 Bacterial DNA-binding protein AL072_13840 PF02190 ATP-dependent protease La (LON) substrate-binding domain AL072_13840 PF00004 ATPase family associated with various cellular activities (AAA) AL072_13840 PF05362 Lon protease (S16) C-terminal proteolytic domain AL072_13850 PF07724 AAA domain (Cdc48 subfamily) AL072_13850 PF10431 C-terminal, D2-small domain, of ClpB protein AL072_13850 PF06689 ClpX C4-type zinc finger AL072_13855 PF00574 Clp protease AL072_13860 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase AL072_13860 PF05698 Bacterial trigger factor protein (TF) C-terminus AL072_13860 PF05697 Bacterial trigger factor protein (TF) AL072_13875 PF01256 Carbohydrate kinase AL072_13875 PF03853 YjeF-related protein N-terminus AL072_13885 PF00543 Nitrogen regulatory protein P-II AL072_13890 PF03951 Glutamine synthetase, beta-Grasp domain AL072_13890 PF00120 Glutamine synthetase, catalytic domain AL072_13920 PF02796 Helix-turn-helix domain of resolvase AL072_13920 PF00239 Resolvase, N terminal domain AL072_13945 PF01425 Amidase AL072_13950 PF02686 Glu-tRNAGln amidotransferase C subunit AL072_13965 PF03652 Holliday junction resolvase AL072_13975 PF02511 Thymidylate synthase complementing protein AL072_13995 PF01327 Polypeptide deformylase AL072_14000 PF01165 Ribosomal protein S21 AL072_14005 PF02548 Ketopantoate hydroxymethyltransferase AL072_14010 PF00270 DEAD/DEAH box helicase AL072_14010 PF08494 DEAD/H associated AL072_14010 PF00271 Helicase conserved C-terminal domain AL072_14015 PF00111 2Fe-2S iron-sulfur cluster binding domain AL072_14025 PF03441 FAD binding domain of DNA photolyase AL072_14025 PF00875 DNA photolyase AL072_14030 PF01475 Ferric uptake regulator family AL072_14045 PF08402 TOBE domain AL072_14045 PF00005 ABC transporter AL072_14050 PF00356 Bacterial regulatory proteins, lacI family AL072_14060 PF00872 Transposase, Mutator family AL072_14070 PF01695 IstB-like ATP binding protein AL072_14085 PF08494 DEAD/H associated AL072_14085 PF00270 DEAD/DEAH box helicase AL072_14085 PF00271 Helicase conserved C-terminal domain AL072_14100 PF00271 Helicase conserved C-terminal domain AL072_14100 PF00176 SNF2 family N-terminal domain AL072_14125 PF00239 Resolvase, N terminal domain AL072_14165 PF00479 Glucose-6-phosphate dehydrogenase, NAD binding domain AL072_14165 PF02781 Glucose-6-phosphate dehydrogenase, C-terminal domain AL072_14170 PF00920 Dehydratase family AL072_14175 PF01418 Helix-turn-helix domain, rpiR family AL072_14175 PF01380 SIS domain AL072_14180 PF00196 Bacterial regulatory proteins, luxR family AL072_14180 PF00072 Response regulator receiver domain AL072_14195 PF12706 Beta-lactamase superfamily domain AL072_14200 PF03070 TENA/THI-4/PQQC family AL072_14205 PF05402 Coenzyme PQQ synthesis protein D (PqqD) AL072_14210 PF04055 Radical SAM superfamily AL072_14210 PF13186 Iron-sulfur cluster-binding domain AL072_14220 PF00857 Isochorismatase family AL072_14230 PF04069 Substrate binding domain of ABC-type glycine betaine transport system AL072_14235 PF00528 Binding-protein-dependent transport system inner membrane component AL072_14240 PF00005 ABC transporter AL072_14245 PF00528 Binding-protein-dependent transport system inner membrane component AL072_14250 PF00676 Dehydrogenase E1 component AL072_14255 PF02779 Transketolase, pyrimidine binding domain AL072_14255 PF02780 Transketolase, C-terminal domain AL072_14260 PF13442 Cytochrome C oxidase, cbb3-type, subunit III AL072_14260 PF00034 Cytochrome c AL072_14265 PF00378 Enoyl-CoA hydratase/isomerase AL072_14265 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain AL072_14265 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain AL072_14280 PF06429 Flagellar basal body rod FlgEFG protein C-terminal AL072_14280 PF07559 Flagellar basal body protein FlaE AL072_14280 PF00460 Flagella basal body rod protein AL072_14305 PF00669 Bacterial flagellin N-terminal helical region AL072_14305 PF07196 Flagellin hook IN motif AL072_14305 PF00700 Bacterial flagellin C-terminal helical region AL072_14310 PF07196 Flagellin hook IN motif AL072_14310 PF07195 Flagellar hook-associated protein 2 C-terminus AL072_14310 PF02465 Flagellar hook-associated protein 2 N-terminus AL072_14320 PF04542 Sigma-70 region 2 AL072_14320 PF08281 Sigma-70, region 4 AL072_14340 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit AL072_14345 PF00294 pfkB family carbohydrate kinase AL072_14350 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 AL072_14350 PF00381 PTS HPr component phosphorylation site AL072_14350 PF02896 PEP-utilising enzyme, TIM barrel domain AL072_14350 PF00391 PEP-utilising enzyme, mobile domain AL072_14350 PF05524 PEP-utilising enzyme, N-terminal AL072_14355 PF00356 Bacterial regulatory proteins, lacI family AL072_14365 PF13439 Glycosyltransferase Family 4 AL072_14365 PF00534 Glycosyl transferases group 1 AL072_14375 PF13614 AAA domain AL072_14375 PF02706 Chain length determinant protein AL072_14375 PF13807 G-rich domain on putative tyrosine kinase AL072_14380 PF00534 Glycosyl transferases group 1 AL072_14380 PF13439 Glycosyltransferase Family 4 AL072_14395 PF00534 Glycosyl transferases group 1 AL072_14420 PF00196 Bacterial regulatory proteins, luxR family AL072_14425 PF00892 EamA-like transporter family AL072_14430 PF00005 ABC transporter AL072_14430 PF06472 ABC transporter transmembrane region 2 AL072_14435 PF03466 LysR substrate binding domain AL072_14435 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AL072_14440 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain AL072_14440 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain AL072_14440 PF00205 Thiamine pyrophosphate enzyme, central domain AL072_14445 PF00171 Aldehyde dehydrogenase family AL072_14460 PF01799 [2Fe-2S] binding domain AL072_14460 PF00111 2Fe-2S iron-sulfur cluster binding domain AL072_14475 PF03739 Lipopolysaccharide export system permease LptF/LptG AL072_14490 PF07995 Glucose / Sorbosone dehydrogenase AL072_14495 PF00266 Aminotransferase class-V AL072_14505 PF03746 LamB/YcsF family AL072_14515 PF02626 Carboxyltransferase domain, subdomain A and B AL072_14530 PF07286 Protein of unknown function (DUF1445) AL072_14535 PF00005 ABC transporter AL072_14540 PF00005 ABC transporter AL072_14540 PF12399 Branched-chain amino acid ATP-binding cassette transporter AL072_14545 PF02653 Branched-chain amino acid transport system / permease component AL072_14545 PF11862 Domain of unknown function (DUF3382) AL072_14550 PF02653 Branched-chain amino acid transport system / permease component AL072_14560 PF03466 LysR substrate binding domain AL072_14560 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AL072_14600 PF00221 Aromatic amino acid lyase AL072_14605 PF01979 Amidohydrolase family AL072_14610 PF01979 Amidohydrolase family AL072_14615 PF00392 Bacterial regulatory proteins, gntR family AL072_14615 PF07702 UTRA domain AL072_14620 PF17392 Urocanase C-terminal domain AL072_14620 PF17391 Urocanase N-terminal domain AL072_14620 PF01175 Urocanase Rossmann-like domain AL072_14625 PF00732 GMC oxidoreductase AL072_14625 PF05199 GMC oxidoreductase AL072_14630 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AL072_14630 PF03466 LysR substrate binding domain AL072_14645 PF00892 EamA-like transporter family AL072_14650 PF00999 Sodium/hydrogen exchanger family AL072_14660 PF03466 LysR substrate binding domain AL072_14660 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AL072_14665 PF02861 Clp amino terminal domain, pathogenicity island component AL072_14665 PF00004 ATPase family associated with various cellular activities (AAA) AL072_14665 PF10431 C-terminal, D2-small domain, of ClpB protein AL072_14665 PF17871 AAA lid domain AL072_14665 PF07724 AAA domain (Cdc48 subfamily) AL072_14680 PF04715 Anthranilate synthase component I, N terminal region AL072_14680 PF00425 chorismate binding enzyme AL072_14685 PF01063 Amino-transferase class IV AL072_14710 PF00691 OmpA family AL072_14710 PF13677 Membrane MotB of proton-channel complex MotA/MotB AL072_14725 PF04717 Type VI secretion system, phage-baseplate injector AL072_14725 PF16671 Actin cross-linking domain AL072_14750 PF00561 alpha/beta hydrolase fold AL072_14780 PF03466 LysR substrate binding domain AL072_14780 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AL072_14785 PF03358 NADPH-dependent FMN reductase AL072_14790 PF13409 Glutathione S-transferase, N-terminal domain AL072_14820 PF01218 Coproporphyrinogen III oxidase AL072_14825 PF00588 SpoU rRNA Methylase family AL072_14830 PF00355 Rieske [2Fe-2S] domain AL072_14830 PF10399 Ubiquitinol-cytochrome C reductase Fe-S subunit TAT signal AL072_14835 PF00032 Cytochrome b(C-terminal)/b6/petD AL072_14835 PF00033 Cytochrome b/b6/petB AL072_14840 PF02167 Cytochrome C1 family AL072_14850 PF00072 Response regulator receiver domain AL072_14850 PF00486 Transcriptional regulatory protein, C terminal AL072_14855 PF08448 PAS fold AL072_14855 PF00990 Diguanylate cyclase, GGDEF domain AL072_14860 PF06114 IrrE N-terminal-like domain AL072_14860 PF01381 Helix-turn-helix AL072_14860 PF09856 Predicted transcriptional regulator (DUF2083) AL072_14865 PF01039 Carboxyl transferase domain AL072_14870 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain AL072_14870 PF00289 Biotin carboxylase, N-terminal domain AL072_14870 PF02785 Biotin carboxylase C-terminal domain AL072_14870 PF00364 Biotin-requiring enzyme AL072_14895 PF01914 MarC family integral membrane protein AL072_14900 PF01654 Cytochrome bd terminal oxidase subunit I AL072_14905 PF02322 Cytochrome bd terminal oxidase subunit II AL072_14915 PF02540 NAD synthase AL072_14915 PF00795 Carbon-nitrogen hydrolase AL072_14920 PF08448 PAS fold AL072_14920 PF03705 CheR methyltransferase, all-alpha domain AL072_14920 PF01739 CheR methyltransferase, SAM binding domain AL072_14920 PF01339 CheB methylesterase AL072_14925 PF00989 PAS fold AL072_14925 PF00512 His Kinase A (phospho-acceptor) domain AL072_14925 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AL072_14925 PF16736 Single Cache-like AL072_14935 PF00356 Bacterial regulatory proteins, lacI family AL072_14940 PF03480 Bacterial extracellular solute-binding protein, family 7 AL072_14945 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component AL072_14955 PF02788 Ribulose bisphosphate carboxylase large chain, N-terminal domain AL072_14955 PF00016 Ribulose bisphosphate carboxylase large chain, catalytic domain AL072_14960 PF17042 Nucleotide-binding C-terminal domain AL072_14960 PF07005 Sugar-binding N-terminal domain AL072_14965 PF02777 Iron/manganese superoxide dismutases, C-terminal domain AL072_14965 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain AL072_14975 PF12833 Helix-turn-helix domain AL072_14995 PF00535 Glycosyl transferase family 2 AL072_14995 PF03552 Cellulose synthase AL072_14995 PF07238 PilZ domain AL072_15005 PF01270 Glycosyl hydrolases family 8 AL072_15030 PF03466 LysR substrate binding domain AL072_15030 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AL072_15040 PF00313 'Cold-shock' DNA-binding domain AL072_15050 PF00271 Helicase conserved C-terminal domain AL072_15050 PF00270 DEAD/DEAH box helicase AL072_15060 PF00107 Zinc-binding dehydrogenase AL072_15060 PF08240 Alcohol dehydrogenase GroES-like domain AL072_15065 PF07690 Major Facilitator Superfamily AL072_15070 PF02129 X-Pro dipeptidyl-peptidase (S15 family) AL072_15080 PF03466 LysR substrate binding domain AL072_15080 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AL072_15105 PF01638 HxlR-like helix-turn-helix AL072_15125 PF00724 NADH:flavin oxidoreductase / NADH oxidase family AL072_15150 PF00232 Glycosyl hydrolase family 1 AL072_15160 PF00892 EamA-like transporter family AL072_15165 PF00850 Histone deacetylase domain AL072_15170 PF07687 Peptidase dimerisation domain AL072_15170 PF01546 Peptidase family M20/M25/M40 AL072_15175 PF02558 Ketopantoate reductase PanE/ApbA AL072_15175 PF08546 Ketopantoate reductase PanE/ApbA C terminal AL072_15180 PF00005 ABC transporter AL072_15180 PF08352 Oligopeptide/dipeptide transporter, C-terminal region AL072_15190 PF00528 Binding-protein-dependent transport system inner membrane component AL072_15195 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle AL072_15200 PF00596 Class II Aldolase and Adducin N-terminal domain AL072_15205 PF07687 Peptidase dimerisation domain AL072_15205 PF01546 Peptidase family M20/M25/M40 AL072_15210 PF03466 LysR substrate binding domain AL072_15210 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AL072_15220 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase AL072_15220 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase AL072_15225 PF01202 Shikimate kinase AL072_15235 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain AL072_15235 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain AL072_15240 PF00107 Zinc-binding dehydrogenase AL072_15240 PF08240 Alcohol dehydrogenase GroES-like domain AL072_15245 PF00356 Bacterial regulatory proteins, lacI family AL072_15250 PF04290 Tripartite ATP-independent periplasmic transporters, DctQ component AL072_15255 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component AL072_15260 PF03480 Bacterial extracellular solute-binding protein, family 7 AL072_15265 PF01464 Transglycosylase SLT domain AL072_15265 PF10145 Phage-related minor tail protein AL072_15265 PF01551 Peptidase family M23 AL072_15275 PF00199 Catalase AL072_15275 PF06628 Catalase-related immune-responsive AL072_15280 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AL072_15280 PF03466 LysR substrate binding domain AL072_15285 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) AL072_15285 PF00128 Alpha amylase, catalytic domain AL072_15290 PF10005 zinc-ribbon domain AL072_15290 PF15887 Putative zinc-binding metallo-peptidase AL072_15295 PF00990 Diguanylate cyclase, GGDEF domain AL072_15295 PF03707 Bacterial signalling protein N terminal repeat AL072_15295 PF00563 EAL domain AL072_15300 PF03480 Bacterial extracellular solute-binding protein, family 7 AL072_15305 PF00005 ABC transporter AL072_15305 PF08402 TOBE domain AL072_15310 PF13416 Bacterial extracellular solute-binding protein AL072_15315 PF00528 Binding-protein-dependent transport system inner membrane component AL072_15320 PF00528 Binding-protein-dependent transport system inner membrane component AL072_15330 PF01381 Helix-turn-helix AL072_15330 PF07883 Cupin domain AL072_15335 PF00171 Aldehyde dehydrogenase family AL072_15340 PF00202 Aminotransferase class-III AL072_15345 PF02515 CoA-transferase family III AL072_15350 PF00672 HAMP domain AL072_15350 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain AL072_15390 PF02080 TrkA-C domain AL072_15390 PF03600 Citrate transporter AL072_15405 PF00155 Aminotransferase class I and II AL072_15410 PF00512 His Kinase A (phospho-acceptor) domain AL072_15410 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AL072_15410 PF00989 PAS fold AL072_15415 PF01835 MG2 domain AL072_15415 PF17962 Bacterial macroglobulin domain 6 AL072_15415 PF17972 Bacterial Alpha-2-macroglobulin MG5 domain AL072_15415 PF17970 Bacterial Alpha-2-macroglobulin MG1 domain AL072_15415 PF07703 Alpha-2-macroglobulin bait region domain AL072_15415 PF17973 Bacterial Alpha-2-macroglobulin MG10 domain AL072_15415 PF11974 Bacterial alpha-2-macroglobulin MG3 domain AL072_15415 PF00207 Alpha-2-macroglobulin family AL072_15425 PF00376 MerR family regulatory protein AL072_15425 PF09278 MerR, DNA binding AL072_15430 PF02803 Thiolase, C-terminal domain AL072_15430 PF00108 Thiolase, N-terminal domain AL072_15435 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain AL072_15435 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain AL072_15435 PF00378 Enoyl-CoA hydratase/isomerase AL072_15440 PF00441 Acyl-CoA dehydrogenase, C-terminal domain AL072_15440 PF12806 Acetyl-CoA dehydrogenase C-terminal like AL072_15440 PF02770 Acyl-CoA dehydrogenase, middle domain AL072_15440 PF02771 Acyl-CoA dehydrogenase, N-terminal domain AL072_15445 PF00072 Response regulator receiver domain AL072_15445 PF00196 Bacterial regulatory proteins, luxR family AL072_15450 PF00571 CBS domain AL072_15450 PF00478 IMP dehydrogenase / GMP reductase domain AL072_15455 PF03922 OmpW family AL072_15465 PF01266 FAD dependent oxidoreductase AL072_15475 PF14815 NUDIX domain AL072_15475 PF00730 HhH-GPD superfamily base excision DNA repair protein AL072_15475 PF00633 Helix-hairpin-helix motif AL072_15475 PF10576 Iron-sulfur binding domain of endonuclease III AL072_15490 PF02463 RecF/RecN/SMC N terminal domain AL072_15500 PF01266 FAD dependent oxidoreductase AL072_15505 PF00120 Glutamine synthetase, catalytic domain AL072_15510 PF01040 UbiA prenyltransferase family AL072_15515 PF00893 Small Multidrug Resistance protein AL072_15530 PF04055 Radical SAM superfamily AL072_15530 PF13186 Iron-sulfur cluster-binding domain AL072_15535 PF13416 Bacterial extracellular solute-binding protein AL072_15540 PF08402 TOBE domain AL072_15540 PF00005 ABC transporter AL072_15545 PF00528 Binding-protein-dependent transport system inner membrane component AL072_15550 PF00528 Binding-protein-dependent transport system inner membrane component AL072_15555 PF04371 Porphyromonas-type peptidyl-arginine deiminase AL072_15565 PF00595 PDZ domain AL072_15565 PF13180 PDZ domain AL072_15570 PF00011 Hsp20/alpha crystallin family AL072_15575 PF00990 Diguanylate cyclase, GGDEF domain AL072_15575 PF00072 Response regulator receiver domain AL072_15580 PF00672 HAMP domain AL072_15580 PF00512 His Kinase A (phospho-acceptor) domain AL072_15580 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AL072_15580 PF13426 PAS domain AL072_15585 PF09345 Domain of unknown function (DUF1987) AL072_15605 PF00486 Transcriptional regulatory protein, C terminal AL072_15605 PF00072 Response regulator receiver domain AL072_15610 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain AL072_15610 PF00476 DNA polymerase family A AL072_15610 PF01612 3'-5' exonuclease AL072_15610 PF01367 5'-3' exonuclease, C-terminal SAM fold AL072_15630 PF01970 Tripartite tricarboxylate transporter TctA family AL072_15640 PF03401 Tripartite tricarboxylate transporter family receptor AL072_15645 PF01081 KDPG and KHG aldolase AL072_15650 PF05035 2-keto-3-deoxy-galactonokinase AL072_15655 PF01614 Bacterial transcriptional regulator AL072_15655 PF09339 IclR helix-turn-helix domain AL072_15660 PF13458 Periplasmic binding protein AL072_15670 PF05726 Pirin C-terminal cupin domain AL072_15670 PF02678 Pirin AL072_15685 PF00593 TonB dependent receptor AL072_15685 PF07715 TonB-dependent Receptor Plug Domain AL072_15690 PF04773 FecR protein AL072_15690 PF16220 Domain of unknown function (DUF4880) AL072_15700 PF01521 Iron-sulphur cluster biosynthesis AL072_15705 PF01883 Iron-sulfur cluster assembly protein AL072_15710 PF01592 NifU-like N terminal domain AL072_15715 PF00266 Aminotransferase class-V AL072_15720 PF01458 Uncharacterized protein family (UPF0051) AL072_15725 PF00005 ABC transporter AL072_15730 PF01458 Uncharacterized protein family (UPF0051) AL072_15760 PF01274 Malate synthase AL072_15770 PF00398 Ribosomal RNA adenine dimethylase AL072_15775 PF00672 HAMP domain AL072_15775 PF16591 Helical bimodular sensor domain AL072_15775 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain AL072_15780 PF02195 ParB-like nuclease domain AL072_15780 PF17762 HTH domain found in ParB protein AL072_15785 PF00753 Metallo-beta-lactamase superfamily AL072_15790 PF02082 Transcriptional regulator AL072_15800 PF00709 Adenylosuccinate synthetase AL072_15805 PF13393 Histidyl-tRNA synthetase AL072_15815 PF01895 PhoU domain AL072_15825 PF02743 Cache domain AL072_15825 PF00211 Adenylate and Guanylate cyclase catalytic domain AL072_15825 PF00672 HAMP domain AL072_15835 PF00313 'Cold-shock' DNA-binding domain AL072_15895 PF08401 Domain of unknown function (DUF1738) AL072_15895 PF18818 Metallopeptidase superfamily domain AL072_15960 PF00872 Transposase, Mutator family AL072_15970 PF00872 Transposase, Mutator family AL072_16085 PF17871 AAA lid domain AL072_16085 PF00004 ATPase family associated with various cellular activities (AAA) AL072_16085 PF10431 C-terminal, D2-small domain, of ClpB protein AL072_16085 PF07724 AAA domain (Cdc48 subfamily) AL072_16140 PF00873 AcrB/AcrD/AcrF family AL072_16145 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion AL072_16155 PF07715 TonB-dependent Receptor Plug Domain AL072_16155 PF00593 TonB dependent receptor AL072_16200 PF01728 FtsJ-like methyltransferase AL072_16200 PF01479 S4 domain AL072_16205 PF00378 Enoyl-CoA hydratase/isomerase AL072_16210 PF00441 Acyl-CoA dehydrogenase, C-terminal domain AL072_16210 PF02771 Acyl-CoA dehydrogenase, N-terminal domain AL072_16210 PF02770 Acyl-CoA dehydrogenase, middle domain AL072_16225 PF02803 Thiolase, C-terminal domain AL072_16225 PF00108 Thiolase, N-terminal domain AL072_16230 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain AL072_16230 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain AL072_16235 PF00378 Enoyl-CoA hydratase/isomerase AL072_16245 PF00724 NADH:flavin oxidoreductase / NADH oxidase family AL072_16245 PF07992 Pyridine nucleotide-disulphide oxidoreductase AL072_16260 PF00724 NADH:flavin oxidoreductase / NADH oxidase family AL072_16270 PF04909 Amidohydrolase AL072_16280 PF00501 AMP-binding enzyme AL072_16280 PF13193 AMP-binding enzyme C-terminal domain AL072_16295 PF02515 CoA-transferase family III AL072_16300 PF02803 Thiolase, C-terminal domain AL072_16300 PF00108 Thiolase, N-terminal domain AL072_16305 PF18321 3-hydroxybutyryl-CoA dehydrogenase reduced Rossmann-fold domain AL072_16305 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain AL072_16305 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain AL072_16310 PF00698 Acyl transferase domain AL072_16310 PF14765 Polyketide synthase dehydratase AL072_16310 PF00550 Phosphopantetheine attachment site AL072_16310 PF08659 KR domain AL072_16310 PF02801 Beta-ketoacyl synthase, C-terminal domain AL072_16310 PF00109 Beta-ketoacyl synthase, N-terminal domain AL072_16310 PF16197 Ketoacyl-synthetase C-terminal extension AL072_16310 PF00107 Zinc-binding dehydrogenase AL072_16310 PF08240 Alcohol dehydrogenase GroES-like domain AL072_16315 PF02515 CoA-transferase family III AL072_16320 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain AL072_16320 PF18321 3-hydroxybutyryl-CoA dehydrogenase reduced Rossmann-fold domain AL072_16320 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain AL072_16325 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain AL072_16325 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain AL072_16330 PF02770 Acyl-CoA dehydrogenase, middle domain AL072_16330 PF00441 Acyl-CoA dehydrogenase, C-terminal domain AL072_16330 PF02771 Acyl-CoA dehydrogenase, N-terminal domain AL072_16340 PF00378 Enoyl-CoA hydratase/isomerase AL072_16350 PF00378 Enoyl-CoA hydratase/isomerase AL072_16355 PF02515 CoA-transferase family III AL072_16360 PF01590 GAF domain AL072_16360 PF00158 Sigma-54 interaction domain AL072_16370 PF12399 Branched-chain amino acid ATP-binding cassette transporter AL072_16370 PF00005 ABC transporter AL072_16375 PF00005 ABC transporter AL072_16380 PF02653 Branched-chain amino acid transport system / permease component AL072_16395 PF09335 SNARE associated Golgi protein AL072_16420 PF05425 Copper resistance protein D AL072_16435 PF03466 LysR substrate binding domain AL072_16435 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AL072_16440 PF01925 Sulfite exporter TauE/SafE AL072_16455 PF00072 Response regulator receiver domain AL072_16455 PF00196 Bacterial regulatory proteins, luxR family AL072_16460 PF07730 Histidine kinase AL072_16485 PF07715 TonB-dependent Receptor Plug Domain AL072_16485 PF00593 TonB dependent receptor AL072_16500 PF00593 TonB dependent receptor AL072_16500 PF07715 TonB-dependent Receptor Plug Domain AL072_16505 PF00072 Response regulator receiver domain AL072_16505 PF00158 Sigma-54 interaction domain AL072_16505 PF02954 Bacterial regulatory protein, Fis family AL072_16510 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain AL072_16510 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain AL072_16515 PF05853 beta-keto acid cleavage enzyme AL072_16540 PF03466 LysR substrate binding domain AL072_16540 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AL072_16550 PF03812 2-keto-3-deoxygluconate permease AL072_16555 PF04962 KduI/IolB family AL072_16570 PF00016 Ribulose bisphosphate carboxylase large chain, catalytic domain AL072_16570 PF02788 Ribulose bisphosphate carboxylase large chain, N-terminal domain AL072_16575 PF00101 Ribulose bisphosphate carboxylase, small chain AL072_16580 PF17866 AAA lid domain AL072_16580 PF00004 ATPase family associated with various cellular activities (AAA) AL072_16585 PF00316 Fructose-1-6-bisphosphatase, N-terminal domain AL072_16590 PF00485 Phosphoribulokinase / Uridine kinase family AL072_16595 PF02780 Transketolase, C-terminal domain AL072_16595 PF02779 Transketolase, pyrimidine binding domain AL072_16595 PF00456 Transketolase, thiamine diphosphate binding domain AL072_16600 PF01116 Fructose-bisphosphate aldolase class-II AL072_16610 PF00529 HlyD membrane-fusion protein of T1SS AL072_16610 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion AL072_16615 PF03412 Peptidase C39 family AL072_16615 PF00664 ABC transporter transmembrane region AL072_16615 PF00005 ABC transporter AL072_16630 PF13419 Haloacid dehalogenase-like hydrolase AL072_16635 PF07690 Major Facilitator Superfamily AL072_16640 PF01855 Pyruvate flavodoxin/ferredoxin oxidoreductase, thiamine diP-bdg AL072_16640 PF10371 Domain of unknown function AL072_16640 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain AL072_16640 PF01558 Pyruvate ferredoxin/flavodoxin oxidoreductase AL072_16640 PF17147 Pyruvate:ferredoxin oxidoreductase core domain II AL072_16645 PF08125 Mannitol dehydrogenase C-terminal domain AL072_16645 PF01232 Mannitol dehydrogenase Rossmann domain AL072_16655 PF00356 Bacterial regulatory proteins, lacI family AL072_16670 PF04055 Radical SAM superfamily AL072_16675 PF01228 Glycine radical AL072_16675 PF02901 Pyruvate formate lyase-like AL072_16685 PF00873 AcrB/AcrD/AcrF family AL072_16700 PF00486 Transcriptional regulatory protein, C terminal AL072_16700 PF00072 Response regulator receiver domain AL072_16705 PF00512 His Kinase A (phospho-acceptor) domain AL072_16705 PF00672 HAMP domain AL072_16705 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AL072_16705 PF16527 Two-component sensor protein CpxA, periplasmic domain AL072_16715 PF03737 Aldolase/RraA AL072_16720 PF11791 Aconitate B N-terminal domain AL072_16720 PF06434 Aconitate hydratase 2 N-terminus AL072_16720 PF00330 Aconitase family (aconitate hydratase) AL072_16755 PF00873 AcrB/AcrD/AcrF family AL072_16760 PF13533 Biotin-lipoyl like AL072_16770 PF03976 Polyphosphate kinase 2 (PPK2) AL072_16775 PF00128 Alpha amylase, catalytic domain AL072_16775 PF11896 Domain of unknown function (DUF3416) AL072_16785 PF00005 ABC transporter AL072_16795 PF00563 EAL domain AL072_16795 PF00990 Diguanylate cyclase, GGDEF domain AL072_16795 PF03707 Bacterial signalling protein N terminal repeat AL072_16805 PF08448 PAS fold AL072_16805 PF00563 EAL domain AL072_16805 PF00990 Diguanylate cyclase, GGDEF domain AL072_16820 PF01370 NAD dependent epimerase/dehydratase family AL072_16830 PF01425 Amidase AL072_16840 PF04241 Protein of unknown function (DUF423) AL072_16845 PF01022 Bacterial regulatory protein, arsR family AL072_16850 PF01206 Sulfurtransferase TusA AL072_16855 PF00850 Histone deacetylase domain AL072_16860 PF02609 Exonuclease VII small subunit AL072_16865 PF00348 Polyprenyl synthetase AL072_16870 PF02779 Transketolase, pyrimidine binding domain AL072_16870 PF13292 1-deoxy-D-xylulose-5-phosphate synthase AL072_16870 PF02780 Transketolase, C-terminal domain AL072_16885 PF00449 Urease alpha-subunit, N-terminal domain AL072_16885 PF01979 Amidohydrolase family AL072_16890 PF00392 Bacterial regulatory proteins, gntR family AL072_16890 PF07729 FCD domain AL072_16905 PF00701 Dihydrodipicolinate synthetase family AL072_16910 PF07992 Pyridine nucleotide-disulphide oxidoreductase AL072_16910 PF04324 BFD-like [2Fe-2S] binding domain AL072_16915 PF00005 ABC transporter AL072_16920 PF00392 Bacterial regulatory proteins, gntR family AL072_16920 PF07729 FCD domain AL072_16930 PF01794 Ferric reductase like transmembrane component AL072_16935 PF00174 Oxidoreductase molybdopterin binding domain AL072_16940 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AL072_16940 PF00072 Response regulator receiver domain AL072_16940 PF09308 LuxQ, periplasmic AL072_16940 PF00512 His Kinase A (phospho-acceptor) domain AL072_16945 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AL072_16945 PF00072 Response regulator receiver domain AL072_16945 PF00512 His Kinase A (phospho-acceptor) domain AL072_16945 PF08448 PAS fold AL072_16945 PF13188 PAS domain AL072_16970 PF02222 ATP-grasp domain AL072_16980 PF02803 Thiolase, C-terminal domain AL072_16980 PF00108 Thiolase, N-terminal domain AL072_16985 PF00501 AMP-binding enzyme AL072_16985 PF13193 AMP-binding enzyme C-terminal domain AL072_16990 PF02632 BioY family AL072_16995 PF02361 Cobalt transport protein AL072_17000 PF00005 ABC transporter AL072_17005 PF00005 ABC transporter AL072_17010 PF00528 Binding-protein-dependent transport system inner membrane component AL072_17015 PF00528 Binding-protein-dependent transport system inner membrane component AL072_17020 PF00497 Bacterial extracellular solute-binding proteins, family 3 AL072_17025 PF07702 UTRA domain AL072_17025 PF00392 Bacterial regulatory proteins, gntR family AL072_17030 PF04403 Paraquat-inducible protein A AL072_17035 PF02470 MlaD protein AL072_17050 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AL072_17050 PF03466 LysR substrate binding domain AL072_17055 PF08240 Alcohol dehydrogenase GroES-like domain AL072_17055 PF00107 Zinc-binding dehydrogenase AL072_17060 PF00756 Putative esterase AL072_17080 PF07732 Multicopper oxidase AL072_17080 PF07731 Multicopper oxidase AL072_17090 PF01053 Cys/Met metabolism PLP-dependent enzyme AL072_17095 PF05145 Transition state regulatory protein AbrB AL072_17105 PF00571 CBS domain AL072_17105 PF00005 ABC transporter AL072_17110 PF00528 Binding-protein-dependent transport system inner membrane component AL072_17115 PF13977 BetI-type transcriptional repressor, C-terminal AL072_17115 PF00440 Bacterial regulatory proteins, tetR family AL072_17120 PF04069 Substrate binding domain of ABC-type glycine betaine transport system AL072_17125 PF02743 Cache domain AL072_17125 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AL072_17125 PF00512 His Kinase A (phospho-acceptor) domain AL072_17130 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle AL072_17135 PF11849 Domain of unknown function (DUF3369) AL072_17140 PF00291 Pyridoxal-phosphate dependent enzyme AL072_17165 PF02872 5'-nucleotidase, C-terminal domain AL072_17165 PF00149 Calcineurin-like phosphoesterase AL072_17170 PF00117 Glutamine amidotransferase class-I AL072_17175 PF00132 Bacterial transferase hexapeptide (six repeats) AL072_17175 PF12804 MobA-like NTP transferase domain AL072_17180 PF13478 XdhC Rossmann domain AL072_17180 PF02625 XdhC and CoxI family AL072_17200 PF03450 CO dehydrogenase flavoprotein C-terminal domain AL072_17200 PF00941 FAD binding domain in molybdopterin dehydrogenase AL072_17205 PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase AL072_17205 PF01315 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain AL072_17210 PF00111 2Fe-2S iron-sulfur cluster binding domain AL072_17210 PF01799 [2Fe-2S] binding domain AL072_17215 PF16868 NMT1-like family AL072_17235 PF00873 AcrB/AcrD/AcrF family AL072_17270 PF02810 SEC-C motif AL072_17280 PF00155 Aminotransferase class I and II AL072_17290 PF00510 Cytochrome c oxidase subunit III AL072_17295 PF00034 Cytochrome c AL072_17300 PF00115 Cytochrome C and Quinol oxidase polypeptide I AL072_17305 PF07728 AAA domain (dynein-related subfamily) AL072_17305 PF08406 CbbQ/NirQ/NorQ C-terminal AL072_17310 PF00092 von Willebrand factor type A domain AL072_17315 PF00994 Probable molybdopterin binding domain AL072_17320 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component AL072_17325 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component AL072_17325 PF04290 Tripartite ATP-independent periplasmic transporters, DctQ component AL072_17330 PF03480 Bacterial extracellular solute-binding protein, family 7 AL072_17345 PF17788 HypF Kae1-like domain AL072_17345 PF00708 Acylphosphatase AL072_17345 PF07503 HypF finger AL072_17345 PF01300 Telomere recombination AL072_17350 PF13649 Methyltransferase domain AL072_17355 PF01292 Prokaryotic cytochrome b561 AL072_17360 PF00374 Nickel-dependent hydrogenase AL072_17365 PF14720 NiFe/NiFeSe hydrogenase small subunit C-terminal AL072_17365 PF01058 NADH ubiquinone oxidoreductase, 20 Kd subunit AL072_17375 PF00158 Sigma-54 interaction domain AL072_17375 PF00072 Response regulator receiver domain AL072_17375 PF02954 Bacterial regulatory protein, Fis family AL072_17380 PF01155 Hydrogenase/urease nickel incorporation, metallochaperone, hypA AL072_17385 PF00301 Rubredoxin AL072_17385 PF11939 [NiFe]-hydrogenase assembly, chaperone, HybE AL072_17390 PF04809 HupH hydrogenase expression protein, C-terminal conserved region AL072_17395 PF07449 Hydrogenase-1 expression protein HyaE AL072_17400 PF01455 HupF/HypC family AL072_17405 PF01750 Hydrogenase maturation protease AL072_17410 PF00374 Nickel-dependent hydrogenase AL072_17415 PF14720 NiFe/NiFeSe hydrogenase small subunit C-terminal AL072_17415 PF01058 NADH ubiquinone oxidoreductase, 20 Kd subunit AL072_17420 PF00989 PAS fold AL072_17420 PF00512 His Kinase A (phospho-acceptor) domain AL072_17420 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AL072_17425 PF07869 Protein of unknown function (DUF1656) AL072_17430 PF04632 Fusaric acid resistance protein family AL072_17435 PF00529 HlyD membrane-fusion protein of T1SS AL072_17435 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion AL072_17450 PF01609 Transposase DDE domain AL072_17455 PF03475 3-alpha domain AL072_17455 PF03473 MOSC domain AL072_17465 PF01276 Orn/Lys/Arg decarboxylase, major domain AL072_17465 PF03711 Orn/Lys/Arg decarboxylase, C-terminal domain AL072_17465 PF03709 Orn/Lys/Arg decarboxylase, N-terminal domain AL072_17475 PF07237 Protein of unknown function (DUF1428) AL072_17480 PF00206 Lyase AL072_17480 PF10415 Fumarase C C-terminus AL072_17485 PF00375 Sodium:dicarboxylate symporter family AL072_17490 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AL072_17490 PF00512 His Kinase A (phospho-acceptor) domain AL072_17490 PF02743 Cache domain AL072_17495 PF02954 Bacterial regulatory protein, Fis family AL072_17495 PF00072 Response regulator receiver domain AL072_17495 PF00158 Sigma-54 interaction domain AL072_17500 PF01425 Amidase AL072_17510 PF01177 Asp/Glu/Hydantoin racemase AL072_17515 PF00528 Binding-protein-dependent transport system inner membrane component AL072_17520 PF00528 Binding-protein-dependent transport system inner membrane component AL072_17530 PF08402 TOBE domain AL072_17530 PF00005 ABC transporter AL072_17540 PF13419 Haloacid dehalogenase-like hydrolase AL072_17545 PF01979 Amidohydrolase family AL072_17550 PF00367 phosphotransferase system, EIIB AL072_17550 PF02378 Phosphotransferase system, EIIC AL072_17555 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 AL072_17555 PF00381 PTS HPr component phosphorylation site AL072_17555 PF02896 PEP-utilising enzyme, TIM barrel domain AL072_17555 PF00391 PEP-utilising enzyme, mobile domain AL072_17555 PF05524 PEP-utilising enzyme, N-terminal AL072_17565 PF07969 Amidohydrolase family AL072_17575 PF00857 Isochorismatase family AL072_17580 PF00561 alpha/beta hydrolase fold AL072_17585 PF02894 Oxidoreductase family, C-terminal alpha/beta domain AL072_17585 PF01408 Oxidoreductase family, NAD-binding Rossmann fold AL072_17595 PF13407 Periplasmic binding protein domain AL072_17600 PF02653 Branched-chain amino acid transport system / permease component AL072_17605 PF00005 ABC transporter AL072_17610 PF00480 ROK family AL072_17615 PF00672 HAMP domain AL072_17615 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain AL072_17635 PF00202 Aminotransferase class-III AL072_17640 PF00171 Aldehyde dehydrogenase family AL072_17645 PF01037 Lrp/AsnC ligand binding domain AL072_17650 PF00155 Aminotransferase class I and II AL072_17650 PF00392 Bacterial regulatory proteins, gntR family AL072_17655 PF00005 ABC transporter AL072_17660 PF00528 Binding-protein-dependent transport system inner membrane component AL072_17665 PF00528 Binding-protein-dependent transport system inner membrane component AL072_17675 PF00291 Pyridoxal-phosphate dependent enzyme AL072_17680 PF02423 Ornithine cyclodeaminase/mu-crystallin family AL072_17685 PF00557 Metallopeptidase family M24 AL072_17685 PF01321 Creatinase/Prolidase N-terminal domain AL072_17690 PF04952 Succinylglutamate desuccinylase / Aspartoacylase family AL072_17705 PF07690 Major Facilitator Superfamily AL072_17715 PF04069 Substrate binding domain of ABC-type glycine betaine transport system AL072_17720 PF00528 Binding-protein-dependent transport system inner membrane component AL072_17725 PF00005 ABC transporter AL072_17725 PF00571 CBS domain AL072_17740 PF00561 alpha/beta hydrolase fold AL072_17745 PF00296 Luciferase-like monooxygenase AL072_17750 PF00171 Aldehyde dehydrogenase family AL072_17765 PF00486 Transcriptional regulatory protein, C terminal AL072_17765 PF00072 Response regulator receiver domain AL072_17795 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle AL072_17800 PF00528 Binding-protein-dependent transport system inner membrane component AL072_17805 PF00528 Binding-protein-dependent transport system inner membrane component AL072_17805 PF12911 N-terminal TM domain of oligopeptide transport permease C AL072_17810 PF08352 Oligopeptide/dipeptide transporter, C-terminal region AL072_17810 PF00005 ABC transporter AL072_17815 PF08352 Oligopeptide/dipeptide transporter, C-terminal region AL072_17815 PF00005 ABC transporter AL072_17820 PF07687 Peptidase dimerisation domain AL072_17820 PF01546 Peptidase family M20/M25/M40 AL072_17830 PF00916 Sulfate permease family AL072_17830 PF01740 STAS domain AL072_17835 PF00582 Universal stress protein family AL072_17850 PF00291 Pyridoxal-phosphate dependent enzyme AL072_17855 PF01037 Lrp/AsnC ligand binding domain AL072_17875 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle AL072_17880 PF00528 Binding-protein-dependent transport system inner membrane component AL072_17885 PF12911 N-terminal TM domain of oligopeptide transport permease C AL072_17885 PF00528 Binding-protein-dependent transport system inner membrane component AL072_17890 PF07969 Amidohydrolase family AL072_17900 PF14031 Putative serine dehydratase domain AL072_17900 PF01168 Alanine racemase, N-terminal domain AL072_17905 PF00005 ABC transporter AL072_17905 PF08352 Oligopeptide/dipeptide transporter, C-terminal region AL072_17910 PF00005 ABC transporter AL072_17910 PF08352 Oligopeptide/dipeptide transporter, C-terminal region AL072_17925 PF00694 Aconitase C-terminal domain AL072_17930 PF00330 Aconitase family (aconitate hydratase) AL072_17935 PF00890 FAD binding domain AL072_17945 PF01968 Hydantoinase/oxoprolinase AL072_17945 PF05378 Hydantoinase/oxoprolinase N-terminal region AL072_17950 PF02538 Hydantoinase B/oxoprolinase AL072_17960 PF00005 ABC transporter AL072_17965 PF00005 ABC transporter AL072_17965 PF12399 Branched-chain amino acid ATP-binding cassette transporter AL072_17970 PF11862 Domain of unknown function (DUF3382) AL072_17970 PF02653 Branched-chain amino acid transport system / permease component AL072_17975 PF02653 Branched-chain amino acid transport system / permease component AL072_17980 PF13458 Periplasmic binding protein AL072_17985 PF00392 Bacterial regulatory proteins, gntR family AL072_17985 PF07702 UTRA domain AL072_17990 PF01112 Asparaginase AL072_17995 PF04951 D-aminopeptidase AL072_18000 PF03576 Peptidase family S58 AL072_18005 PF00528 Binding-protein-dependent transport system inner membrane component AL072_18005 PF12911 N-terminal TM domain of oligopeptide transport permease C AL072_18010 PF00528 Binding-protein-dependent transport system inner membrane component AL072_18015 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle AL072_18020 PF08352 Oligopeptide/dipeptide transporter, C-terminal region AL072_18020 PF00005 ABC transporter AL072_18025 PF01063 Amino-transferase class IV AL072_18035 PF00890 FAD binding domain AL072_18060 PF00325 Bacterial regulatory proteins, crp family AL072_18060 PF00027 Cyclic nucleotide-binding domain AL072_18075 PF00211 Adenylate and Guanylate cyclase catalytic domain AL072_18130 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component AL072_18135 PF02682 Carboxyltransferase domain, subdomain C and D AL072_18140 PF02626 Carboxyltransferase domain, subdomain A and B AL072_18145 PF00005 ABC transporter AL072_18145 PF08402 TOBE domain AL072_18150 PF13416 Bacterial extracellular solute-binding protein AL072_18155 PF00528 Binding-protein-dependent transport system inner membrane component AL072_18160 PF00528 Binding-protein-dependent transport system inner membrane component AL072_18175 PF01425 Amidase AL072_18180 PF00392 Bacterial regulatory proteins, gntR family AL072_18180 PF07729 FCD domain AL072_18195 PF01232 Mannitol dehydrogenase Rossmann domain AL072_18195 PF08125 Mannitol dehydrogenase C-terminal domain AL072_18200 PF03786 D-mannonate dehydratase (UxuA) AL072_18205 PF00005 ABC transporter AL072_18210 PF01032 FecCD transport family AL072_18215 PF01032 FecCD transport family AL072_18220 PF01497 Periplasmic binding protein AL072_18225 PF00892 EamA-like transporter family AL072_18230 PF02885 Glycosyl transferase family, helical bundle domain AL072_18230 PF00591 Glycosyl transferase family, a/b domain AL072_18235 PF07715 TonB-dependent Receptor Plug Domain AL072_18235 PF00593 TonB dependent receptor AL072_18240 PF13640 2OG-Fe(II) oxygenase superfamily AL072_18240 PF18331 PKHD-type hydroxylase C-terminal domain AL072_18250 PF01070 FMN-dependent dehydrogenase AL072_18260 PF03814 Potassium-transporting ATPase A subunit AL072_18270 PF02669 K+-transporting ATPase, c chain AL072_18275 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AL072_18275 PF13493 Domain of unknown function (DUF4118) AL072_18275 PF00512 His Kinase A (phospho-acceptor) domain AL072_18275 PF02702 Osmosensitive K+ channel His kinase sensor domain AL072_18275 PF13492 GAF domain AL072_18280 PF00072 Response regulator receiver domain AL072_18280 PF00486 Transcriptional regulatory protein, C terminal AL072_18300 PF13746 4Fe-4S dicluster domain AL072_18300 PF12801 4Fe-4S binding domain AL072_18300 PF11614 IG-like fold at C-terminal of FixG, putative oxidoreductase AL072_18305 PF00155 Aminotransferase class I and II AL072_18305 PF00392 Bacterial regulatory proteins, gntR family AL072_18325 PF00550 Phosphopantetheine attachment site AL072_18330 PF00550 Phosphopantetheine attachment site AL072_18370 PF00109 Beta-ketoacyl synthase, N-terminal domain AL072_18370 PF02801 Beta-ketoacyl synthase, C-terminal domain AL072_18385 PF02801 Beta-ketoacyl synthase, C-terminal domain AL072_18385 PF00109 Beta-ketoacyl synthase, N-terminal domain AL072_18390 PF02798 Glutathione S-transferase, N-terminal domain AL072_18395 PF00175 Oxidoreductase NAD-binding domain AL072_18395 PF00970 Oxidoreductase FAD-binding domain AL072_18395 PF00042 Globin AL072_18410 PF03466 LysR substrate binding domain AL072_18410 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AL072_18415 PF00392 Bacterial regulatory proteins, gntR family AL072_18415 PF00155 Aminotransferase class I and II AL072_18425 PF00795 Carbon-nitrogen hydrolase AL072_18445 PF02769 AIR synthase related protein, C-terminal domain AL072_18445 PF00586 AIR synthase related protein, N-terminal domain AL072_18450 PF13439 Glycosyltransferase Family 4 AL072_18450 PF00534 Glycosyl transferases group 1 AL072_18465 PF03737 Aldolase/RraA AL072_18470 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain AL072_18470 PF01842 ACT domain AL072_18470 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain AL072_18475 PF00005 ABC transporter AL072_18480 PF00528 Binding-protein-dependent transport system inner membrane component AL072_18485 PF00528 Binding-protein-dependent transport system inner membrane component AL072_18490 PF01070 FMN-dependent dehydrogenase AL072_18495 PF00497 Bacterial extracellular solute-binding proteins, family 3 AL072_18500 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AL072_18500 PF03466 LysR substrate binding domain AL072_18505 PF01266 FAD dependent oxidoreductase AL072_18510 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AL072_18510 PF03466 LysR substrate binding domain AL072_18530 PF01425 Amidase AL072_18535 PF01425 Amidase AL072_18540 PF00857 Isochorismatase family AL072_18545 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle AL072_18560 PF08352 Oligopeptide/dipeptide transporter, C-terminal region AL072_18560 PF00005 ABC transporter AL072_18565 PF00005 ABC transporter AL072_18565 PF08352 Oligopeptide/dipeptide transporter, C-terminal region AL072_18570 PF00857 Isochorismatase family AL072_18575 PF05145 Transition state regulatory protein AbrB AL072_18580 PF00392 Bacterial regulatory proteins, gntR family AL072_18580 PF07729 FCD domain AL072_18590 PF16671 Actin cross-linking domain AL072_18590 PF12146 Serine aminopeptidase, S33 AL072_18590 PF11713 Peptidase C80 family AL072_18590 PF07634 RtxA repeat AL072_18590 PF11647 Membrane Localization Domain AL072_18600 PF00005 ABC transporter AL072_18600 PF03412 Peptidase C39 family AL072_18600 PF00664 ABC transporter transmembrane region AL072_18605 PF01315 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain AL072_18605 PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase AL072_18610 PF01799 [2Fe-2S] binding domain AL072_18610 PF00111 2Fe-2S iron-sulfur cluster binding domain AL072_18615 PF03450 CO dehydrogenase flavoprotein C-terminal domain AL072_18615 PF00941 FAD binding domain in molybdopterin dehydrogenase AL072_18620 PF00171 Aldehyde dehydrogenase family AL072_18640 PF06629 MltA-interacting protein MipA AL072_18645 PF00486 Transcriptional regulatory protein, C terminal AL072_18645 PF00072 Response regulator receiver domain AL072_18650 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AL072_18650 PF00512 His Kinase A (phospho-acceptor) domain AL072_18655 PF00072 Response regulator receiver domain AL072_18655 PF00196 Bacterial regulatory proteins, luxR family AL072_18660 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AL072_18660 PF05231 MASE1 AL072_18660 PF07730 Histidine kinase AL072_18670 PF13360 PQQ-like domain AL072_18670 PF01011 PQQ enzyme repeat AL072_18675 PF00497 Bacterial extracellular solute-binding proteins, family 3 AL072_18680 PF13442 Cytochrome C oxidase, cbb3-type, subunit III AL072_18685 PF02315 Methanol dehydrogenase beta subunit AL072_18690 PF17863 AAA lid domain AL072_18690 PF07726 ATPase family associated with various cellular activities (AAA) AL072_18725 PF00248 Aldo/keto reductase family AL072_18730 PF03466 LysR substrate binding domain AL072_18730 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AL072_18735 PF07687 Peptidase dimerisation domain AL072_18735 PF01546 Peptidase family M20/M25/M40 AL072_18745 PF02653 Branched-chain amino acid transport system / permease component AL072_18750 PF00005 ABC transporter AL072_18755 PF12399 Branched-chain amino acid ATP-binding cassette transporter AL072_18755 PF00005 ABC transporter AL072_18765 PF01965 DJ-1/PfpI family AL072_18765 PF12833 Helix-turn-helix domain AL072_18770 PF01965 DJ-1/PfpI family AL072_18780 PF07969 Amidohydrolase family AL072_18785 PF02492 CobW/HypB/UreG, nucleotide-binding domain AL072_18785 PF07683 Cobalamin synthesis protein cobW C-terminal domain AL072_18790 PF01266 FAD dependent oxidoreductase AL072_18795 PF07992 Pyridine nucleotide-disulphide oxidoreductase AL072_18795 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain AL072_18800 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) AL072_18800 PF02817 e3 binding domain AL072_18800 PF00364 Biotin-requiring enzyme AL072_18805 PF02779 Transketolase, pyrimidine binding domain AL072_18805 PF02780 Transketolase, C-terminal domain AL072_18810 PF00676 Dehydrogenase E1 component AL072_18810 PF12573 2-oxoisovalerate dehydrogenase E1 alpha subunit N terminal AL072_18815 PF01037 Lrp/AsnC ligand binding domain AL072_18820 PF09339 IclR helix-turn-helix domain AL072_18820 PF01614 Bacterial transcriptional regulator AL072_18830 PF02515 CoA-transferase family III AL072_18845 PF00005 ABC transporter AL072_18850 PF00528 Binding-protein-dependent transport system inner membrane component AL072_18855 PF11738 Protein of unknown function (DUF3298) AL072_18855 PF01522 Polysaccharide deacetylase AL072_18855 PF13739 Deacetylase PdaC AL072_18860 PF00106 short chain dehydrogenase AL072_18860 PF00561 alpha/beta hydrolase fold AL072_18870 PF03466 LysR substrate binding domain AL072_18870 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AL072_18875 PF00694 Aconitase C-terminal domain AL072_18885 PF00561 alpha/beta hydrolase fold AL072_18935 PF00528 Binding-protein-dependent transport system inner membrane component AL072_18945 PF00005 ABC transporter AL072_18950 PF03466 LysR substrate binding domain AL072_18950 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AL072_18955 PF01053 Cys/Met metabolism PLP-dependent enzyme AL072_18960 PF00497 Bacterial extracellular solute-binding proteins, family 3 AL072_18965 PF00528 Binding-protein-dependent transport system inner membrane component AL072_18970 PF00528 Binding-protein-dependent transport system inner membrane component AL072_18975 PF00005 ABC transporter AL072_18980 PF07715 TonB-dependent Receptor Plug Domain AL072_18980 PF00593 TonB dependent receptor AL072_19015 PF01654 Cytochrome bd terminal oxidase subunit I AL072_19020 PF02322 Cytochrome bd terminal oxidase subunit II AL072_19030 PF01799 [2Fe-2S] binding domain AL072_19030 PF00111 2Fe-2S iron-sulfur cluster binding domain AL072_19035 PF03450 CO dehydrogenase flavoprotein C-terminal domain AL072_19035 PF00941 FAD binding domain in molybdopterin dehydrogenase AL072_19040 PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase AL072_19040 PF01315 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain AL072_19045 PF00005 ABC transporter AL072_19045 PF08352 Oligopeptide/dipeptide transporter, C-terminal region AL072_19050 PF00005 ABC transporter AL072_19050 PF08352 Oligopeptide/dipeptide transporter, C-terminal region AL072_19055 PF12911 N-terminal TM domain of oligopeptide transport permease C AL072_19055 PF00528 Binding-protein-dependent transport system inner membrane component AL072_19060 PF00528 Binding-protein-dependent transport system inner membrane component AL072_19065 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle AL072_19070 PF00196 Bacterial regulatory proteins, luxR family AL072_19070 PF00072 Response regulator receiver domain AL072_19075 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AL072_19075 PF00512 His Kinase A (phospho-acceptor) domain AL072_19075 PF00072 Response regulator receiver domain AL072_19075 PF08448 PAS fold AL072_19075 PF13426 PAS domain AL072_19080 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AL072_19080 PF07568 Histidine kinase AL072_19080 PF12282 Signal transduction histidine kinase AL072_19085 PF01261 Xylose isomerase-like TIM barrel AL072_19090 PF00990 Diguanylate cyclase, GGDEF domain AL072_19090 PF08448 PAS fold AL072_19095 PF03466 LysR substrate binding domain AL072_19095 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AL072_19105 PF17202 Single cache domain 3 AL072_19105 PF00672 HAMP domain AL072_19105 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain AL072_19115 PF01272 Transcription elongation factor, GreA/GreB, C-term AL072_19115 PF14760 Rnk N-terminus AL072_19120 PF00106 short chain dehydrogenase AL072_19150 PF04545 Sigma-70, region 4 AL072_19150 PF04542 Sigma-70 region 2 AL072_19155 PF12973 ChrR Cupin-like domain AL072_19160 PF00480 ROK family AL072_19170 PF00528 Binding-protein-dependent transport system inner membrane component AL072_19175 PF00528 Binding-protein-dependent transport system inner membrane component AL072_19180 PF00005 ABC transporter AL072_19180 PF08402 TOBE domain AL072_19190 PF01232 Mannitol dehydrogenase Rossmann domain AL072_19190 PF08125 Mannitol dehydrogenase C-terminal domain AL072_19195 PF00294 pfkB family carbohydrate kinase AL072_19290 PF06719 AraC-type transcriptional regulator N-terminus AL072_19290 PF12833 Helix-turn-helix domain AL072_19315 PF00005 ABC transporter AL072_19320 PF00528 Binding-protein-dependent transport system inner membrane component AL072_19330 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AL072_19330 PF03466 LysR substrate binding domain AL072_19335 PF00266 Aminotransferase class-V AL072_19340 PF13419 Haloacid dehalogenase-like hydrolase AL072_19345 PF01266 FAD dependent oxidoreductase AL072_19345 PF05690 Thiazole biosynthesis protein ThiG AL072_19350 PF00202 Aminotransferase class-III AL072_19355 PF00753 Metallo-beta-lactamase superfamily AL072_19355 PF12706 Beta-lactamase superfamily domain AL072_19360 PF00528 Binding-protein-dependent transport system inner membrane component AL072_19365 PF00528 Binding-protein-dependent transport system inner membrane component AL072_19395 PF07883 Cupin domain AL072_19400 PF00872 Transposase, Mutator family AL072_19425 PF00224 Pyruvate kinase, barrel domain AL072_19425 PF02887 Pyruvate kinase, alpha/beta domain AL072_19430 PF01263 Aldose 1-epimerase AL072_19445 PF00528 Binding-protein-dependent transport system inner membrane component AL072_19450 PF00528 Binding-protein-dependent transport system inner membrane component AL072_19455 PF00005 ABC transporter AL072_19455 PF12857 TOBE-like domain AL072_19455 PF17850 CysA C-terminal regulatory domain AL072_19460 PF02254 TrkA-N domain AL072_19460 PF02080 TrkA-C domain AL072_19460 PF00999 Sodium/hydrogen exchanger family AL072_19480 PF02540 NAD synthase AL072_19485 PF00733 Asparagine synthase AL072_19485 PF13537 Glutamine amidotransferase domain AL072_19490 PF00501 AMP-binding enzyme AL072_19490 PF13193 AMP-binding enzyme C-terminal domain AL072_19505 PF00534 Glycosyl transferases group 1 AL072_19505 PF13579 Glycosyl transferase 4-like domain AL072_19510 PF13439 Glycosyltransferase Family 4 AL072_19510 PF00534 Glycosyl transferases group 1 AL072_19515 PF00535 Glycosyl transferase family 2 AL072_19525 PF02397 Bacterial sugar transferase AL072_19535 PF00132 Bacterial transferase hexapeptide (six repeats) AL072_19540 PF00150 Cellulase (glycosyl hydrolase family 5) AL072_19555 PF13807 G-rich domain on putative tyrosine kinase AL072_19555 PF02706 Chain length determinant protein AL072_19555 PF13614 AAA domain AL072_19565 PF00270 DEAD/DEAH box helicase AL072_19565 PF00271 Helicase conserved C-terminal domain AL072_19570 PF00300 Histidine phosphatase superfamily (branch 1) AL072_19585 PF00989 PAS fold AL072_19585 PF18698 Histidine kinase sensor domain AL072_19585 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AL072_19585 PF00672 HAMP domain AL072_19585 PF00512 His Kinase A (phospho-acceptor) domain AL072_19605 PF08666 SAF domain AL072_19605 PF03102 NeuB family AL072_19610 PF02348 Cytidylyltransferase AL072_19620 PF00561 alpha/beta hydrolase fold AL072_19620 PF00364 Biotin-requiring enzyme AL072_19640 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III AL072_19640 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal AL072_19645 PF00700 Bacterial flagellin C-terminal helical region AL072_19645 PF00669 Bacterial flagellin N-terminal helical region AL072_19675 PF08241 Methyltransferase domain AL072_19695 PF06429 Flagellar basal body rod FlgEFG protein C-terminal AL072_19710 PF00128 Alpha amylase, catalytic domain AL072_19715 PF03480 Bacterial extracellular solute-binding protein, family 7 AL072_19730 PF07559 Flagellar basal body protein FlaE AL072_19730 PF06429 Flagellar basal body rod FlgEFG protein C-terminal AL072_19730 PF00460 Flagella basal body rod protein AL072_19745 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AL072_19745 PF00497 Bacterial extracellular solute-binding proteins, family 3 AL072_19745 PF00512 His Kinase A (phospho-acceptor) domain AL072_19770 PF02798 Glutathione S-transferase, N-terminal domain AL072_19770 PF00043 Glutathione S-transferase, C-terminal domain AL072_19780 PF00378 Enoyl-CoA hydratase/isomerase AL072_19790 PF00486 Transcriptional regulatory protein, C terminal AL072_19790 PF00072 Response regulator receiver domain AL072_19800 PF00128 Alpha amylase, catalytic domain AL072_19805 PF02446 4-alpha-glucanotransferase AL072_19815 PF00158 Sigma-54 interaction domain AL072_19815 PF00072 Response regulator receiver domain AL072_19815 PF02954 Bacterial regulatory protein, Fis family AL072_19820 PF00512 His Kinase A (phospho-acceptor) domain AL072_19820 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AL072_19825 PF00375 Sodium:dicarboxylate symporter family AL072_19830 PF03949 Malic enzyme, NAD binding domain AL072_19830 PF00390 Malic enzyme, N-terminal domain AL072_19830 PF01515 Phosphate acetyl/butaryl transferase AL072_19845 PF00483 Nucleotidyl transferase AL072_19855 PF16998 17 kDa outer membrane surface antigen AL072_19855 PF05433 Glycine zipper 2TM domain AL072_19860 PF13193 AMP-binding enzyme C-terminal domain AL072_19860 PF00501 AMP-binding enzyme AL072_19865 PF01925 Sulfite exporter TauE/SafE AL072_19870 PF00005 ABC transporter AL072_19885 PF02653 Branched-chain amino acid transport system / permease component AL072_19890 PF02653 Branched-chain amino acid transport system / permease component AL072_19895 PF00005 ABC transporter AL072_19895 PF12399 Branched-chain amino acid ATP-binding cassette transporter AL072_19900 PF00722 Glycosyl hydrolases family 16 AL072_19905 PF01098 Cell cycle protein AL072_19910 PF00990 Diguanylate cyclase, GGDEF domain AL072_19915 PF16859 Tetracyclin repressor-like, C-terminal domain AL072_19915 PF00440 Bacterial regulatory proteins, tetR family AL072_19920 PF13533 Biotin-lipoyl like AL072_19925 PF07690 Major Facilitator Superfamily AL072_19935 PF00561 alpha/beta hydrolase fold AL072_19940 PF01906 Putative heavy-metal-binding AL072_19975 PF17674 HHH domain AL072_19975 PF09371 Tex-like protein N-terminal domain AL072_19975 PF00575 S1 RNA binding domain AL072_19975 PF16921 Tex protein YqgF-like domain AL072_19980 PF00361 Proton-conducting membrane transporter AL072_19985 PF00146 NADH dehydrogenase AL072_19995 PF00361 Proton-conducting membrane transporter AL072_20000 PF00329 Respiratory-chain NADH dehydrogenase, 30 Kd subunit AL072_20000 PF00346 Respiratory-chain NADH dehydrogenase, 49 Kd subunit AL072_20005 PF01058 NADH ubiquinone oxidoreductase, 20 Kd subunit AL072_20040 PF08446 PAS fold AL072_20040 PF00512 His Kinase A (phospho-acceptor) domain AL072_20040 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AL072_20040 PF01590 GAF domain AL072_20040 PF00360 Phytochrome region AL072_20045 PF00072 Response regulator receiver domain AL072_20050 PF08447 PAS fold AL072_20050 PF07536 HWE histidine kinase AL072_20050 PF13426 PAS domain AL072_20055 PF00072 Response regulator receiver domain AL072_20060 PF04314 Copper chaperone PCu(A)C AL072_20070 PF00005 ABC transporter AL072_20095 PF13360 PQQ-like domain AL072_20095 PF01011 PQQ enzyme repeat AL072_20125 PF00005 ABC transporter AL072_20145 PF03050 Transposase IS66 family AL072_20145 PF13817 IS66 C-terminal element AL072_20145 PF13007 Transposase C of IS166 homeodomain AL072_20145 PF13005 zinc-finger binding domain of transposase IS66 AL072_20150 PF03050 Transposase IS66 family AL072_20150 PF13817 IS66 C-terminal element AL072_20150 PF13007 Transposase C of IS166 homeodomain AL072_20150 PF13005 zinc-finger binding domain of transposase IS66 AL072_20160 PF05717 IS66 Orf2 like protein AL072_20180 PF17757 UvrB interaction domain AL072_20180 PF03461 TRCF domain AL072_20180 PF00271 Helicase conserved C-terminal domain AL072_20180 PF00270 DEAD/DEAH box helicase AL072_20180 PF02559 CarD-like/TRCF domain AL072_20210 PF08241 Methyltransferase domain AL072_20225 PF00529 HlyD membrane-fusion protein of T1SS AL072_20225 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion AL072_20230 PF00664 ABC transporter transmembrane region AL072_20230 PF00005 ABC transporter AL072_20235 PF16363 GDP-mannose 4,6 dehydratase AL072_20240 PF12802 MarR family AL072_20250 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AL072_20250 PF03466 LysR substrate binding domain AL072_20255 PF00202 Aminotransferase class-III AL072_20260 PF00171 Aldehyde dehydrogenase family AL072_20265 PF08376 Nitrate and nitrite sensing AL072_20265 PF03861 ANTAR domain AL072_20275 PF01070 FMN-dependent dehydrogenase AL072_20285 PF00664 ABC transporter transmembrane region AL072_20285 PF00005 ABC transporter AL072_20290 PF00664 ABC transporter transmembrane region AL072_20290 PF00005 ABC transporter AL072_20305 PF07715 TonB-dependent Receptor Plug Domain AL072_20305 PF00593 TonB dependent receptor AL072_20320 PF01965 DJ-1/PfpI family AL072_20325 PF04828 Glutathione-dependent formaldehyde-activating enzyme AL072_20335 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain AL072_20335 PF00205 Thiamine pyrophosphate enzyme, central domain AL072_20335 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain AL072_20340 PF07885 Ion channel AL072_20340 PF00027 Cyclic nucleotide-binding domain AL072_20345 PF00733 Asparagine synthase AL072_20345 PF13537 Glutamine amidotransferase domain AL072_20350 PF04262 Glutamate-cysteine ligase AL072_20350 PF01071 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain AL072_20350 PF18419 ATP-grasp-like domain AL072_20355 PF05343 M42 glutamyl aminopeptidase AL072_20360 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AL072_20360 PF00512 His Kinase A (phospho-acceptor) domain AL072_20365 PF00072 Response regulator receiver domain AL072_20365 PF00486 Transcriptional regulatory protein, C terminal AL072_20370 PF00072 Response regulator receiver domain AL072_20370 PF01339 CheB methylesterase AL072_20375 PF01627 Hpt domain AL072_20375 PF01584 CheW-like domain AL072_20375 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AL072_20375 PF00072 Response regulator receiver domain AL072_20380 PF00672 HAMP domain AL072_20380 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain AL072_20380 PF17200 Single Cache domain 2 AL072_20390 PF03705 CheR methyltransferase, all-alpha domain AL072_20390 PF01739 CheR methyltransferase, SAM binding domain AL072_20400 PF01575 MaoC like domain AL072_20400 PF00171 Aldehyde dehydrogenase family AL072_20410 PF00072 Response regulator receiver domain AL072_20430 PF01595 Cyclin M transmembrane N-terminal domain AL072_20430 PF03471 Transporter associated domain AL072_20430 PF00571 CBS domain AL072_20440 PF00072 Response regulator receiver domain AL072_20445 PF00072 Response regulator receiver domain AL072_20445 PF01627 Hpt domain AL072_20445 PF00512 His Kinase A (phospho-acceptor) domain AL072_20445 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AL072_20455 PF01381 Helix-turn-helix AL072_20460 PF01514 Secretory protein of YscJ/FliF family AL072_20460 PF08345 Flagellar M-ring protein C-terminal AL072_20470 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term AL072_20475 PF01618 MotA/TolQ/ExbB proton channel family AL072_20480 PF02954 Bacterial regulatory protein, Fis family AL072_20480 PF00158 Sigma-54 interaction domain AL072_20485 PF00771 FHIPEP family AL072_20495 PF10609 NUBPL iron-transfer P-loop NTPase AL072_20505 PF14489 QueF-like protein AL072_20510 PF07690 Major Facilitator Superfamily AL072_20520 PF13302 Acetyltransferase (GNAT) domain AL072_20525 PF00155 Aminotransferase class I and II AL072_20535 PF00561 alpha/beta hydrolase fold AL072_20550 PF07690 Major Facilitator Superfamily AL072_20555 PF00376 MerR family regulatory protein AL072_20555 PF09278 MerR, DNA binding AL072_20560 PF00403 Heavy-metal-associated domain AL072_20570 PF03458 UPF0126 domain AL072_20585 PF00149 Calcineurin-like phosphoesterase AL072_20590 PF00486 Transcriptional regulatory protein, C terminal AL072_20590 PF00072 Response regulator receiver domain AL072_20600 PF01339 CheB methylesterase AL072_20600 PF00072 Response regulator receiver domain AL072_20615 PF00072 Response regulator receiver domain AL072_20615 PF01339 CheB methylesterase AL072_20625 PF00672 HAMP domain AL072_20625 PF02743 Cache domain AL072_20625 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain AL072_20640 PF00348 Polyprenyl synthetase AL072_20655 PF06965 Na+/H+ antiporter 1 AL072_20655 PF01343 Peptidase family S49 AL072_20665 PF04461 Protein of unknown function (DUF520) AL072_20670 PF08352 Oligopeptide/dipeptide transporter, C-terminal region AL072_20670 PF00005 ABC transporter AL072_20675 PF08352 Oligopeptide/dipeptide transporter, C-terminal region AL072_20675 PF00005 ABC transporter AL072_20680 PF00528 Binding-protein-dependent transport system inner membrane component AL072_20680 PF12911 N-terminal TM domain of oligopeptide transport permease C AL072_20685 PF00528 Binding-protein-dependent transport system inner membrane component AL072_20690 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle AL072_20695 PF00892 EamA-like transporter family AL072_20705 PF00501 AMP-binding enzyme AL072_20705 PF13193 AMP-binding enzyme C-terminal domain AL072_20715 PF00072 Response regulator receiver domain AL072_20720 PF00551 Formyl transferase AL072_20730 PF01520 N-acetylmuramoyl-L-alanine amidase AL072_20735 PF04972 BON domain AL072_20745 PF00698 Acyl transferase domain AL072_20745 PF00550 Phosphopantetheine attachment site AL072_20745 PF14765 Polyketide synthase dehydratase AL072_20745 PF16197 Ketoacyl-synthetase C-terminal extension AL072_20745 PF00109 Beta-ketoacyl synthase, N-terminal domain AL072_20745 PF02801 Beta-ketoacyl synthase, C-terminal domain AL072_20745 PF08659 KR domain AL072_20745 PF08240 Alcohol dehydrogenase GroES-like domain AL072_20750 PF01614 Bacterial transcriptional regulator AL072_20750 PF09339 IclR helix-turn-helix domain AL072_20755 PF02629 CoA binding domain AL072_20755 PF00549 CoA-ligase AL072_20760 PF00549 CoA-ligase AL072_20760 PF08442 ATP-grasp domain AL072_20765 PF02515 CoA-transferase family III AL072_20770 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain AL072_20770 PF00205 Thiamine pyrophosphate enzyme, central domain AL072_20770 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain AL072_20775 PF07729 FCD domain AL072_20775 PF00392 Bacterial regulatory proteins, gntR family AL072_20780 PF01614 Bacterial transcriptional regulator AL072_20780 PF09339 IclR helix-turn-helix domain AL072_20785 PF13426 PAS domain AL072_20785 PF08447 PAS fold AL072_20785 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain AL072_20790 PF03466 LysR substrate binding domain AL072_20790 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AL072_20805 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain AL072_20805 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain AL072_20805 PF00205 Thiamine pyrophosphate enzyme, central domain AL072_20810 PF00576 HIUase/Transthyretin family AL072_20820 PF09349 OHCU decarboxylase AL072_20820 PF01014 Uricase AL072_20825 PF02233 NAD(P) transhydrogenase beta subunit AL072_20830 PF12769 4TM region of pyridine nucleotide transhydrogenase, mitoch AL072_20835 PF05222 Alanine dehydrogenase/PNT, N-terminal domain AL072_20835 PF01262 Alanine dehydrogenase/PNT, C-terminal domain AL072_20840 PF00571 CBS domain AL072_20845 PF08546 Ketopantoate reductase PanE/ApbA C terminal AL072_20845 PF02558 Ketopantoate reductase PanE/ApbA AL072_20850 PF07690 Major Facilitator Superfamily AL072_20870 PF00850 Histone deacetylase domain AL072_20875 PF00391 PEP-utilising enzyme, mobile domain AL072_20875 PF01326 Pyruvate phosphate dikinase, PEP/pyruvate binding domain AL072_20875 PF02896 PEP-utilising enzyme, TIM barrel domain AL072_20890 PF02887 Pyruvate kinase, alpha/beta domain AL072_20890 PF00224 Pyruvate kinase, barrel domain AL072_20895 PF00392 Bacterial regulatory proteins, gntR family AL072_20895 PF07729 FCD domain AL072_20900 PF02581 Thiamine monophosphate synthase AL072_20905 PF07690 Major Facilitator Superfamily AL072_20935 PF00497 Bacterial extracellular solute-binding proteins, family 3 AL072_20935 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AL072_20935 PF00512 His Kinase A (phospho-acceptor) domain AL072_20940 PF02934 GatB/GatE catalytic domain AL072_20940 PF02637 GatB domain AL072_20950 PF00291 Pyridoxal-phosphate dependent enzyme AL072_20955 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term AL072_20965 PF03023 Lipid II flippase MurJ AL072_20970 PF12697 Alpha/beta hydrolase family AL072_20975 PF03952 Enolase, N-terminal domain AL072_20975 PF00113 Enolase, C-terminal TIM barrel domain AL072_20990 PF08534 Redoxin AL072_20995 PF00664 ABC transporter transmembrane region AL072_20995 PF00005 ABC transporter AL072_21000 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion AL072_21000 PF00529 HlyD membrane-fusion protein of T1SS AL072_21010 PF07167 Poly-beta-hydroxybutyrate polymerase (PhaC) N-terminus AL072_21010 PF00561 alpha/beta hydrolase fold AL072_21015 PF08239 Bacterial SH3 domain AL072_21015 PF00069 Protein kinase domain AL072_21040 PF13247 4Fe-4S dicluster domain AL072_21050 PF01568 Molydopterin dinucleotide binding domain AL072_21050 PF18364 Molybdopterin oxidoreductase N-terminal domain AL072_21050 PF00384 Molybdopterin oxidoreductase AL072_21060 PF03264 NapC/NirT cytochrome c family, N-terminal region AL072_21065 PF00486 Transcriptional regulatory protein, C terminal AL072_21065 PF00072 Response regulator receiver domain AL072_21075 PF00593 TonB dependent receptor AL072_21075 PF07715 TonB-dependent Receptor Plug Domain AL072_21085 PF04542 Sigma-70 region 2 AL072_21085 PF08281 Sigma-70, region 4 AL072_21100 PF00005 ABC transporter AL072_21145 PF00890 FAD binding domain AL072_21145 PF14537 Cytochrome c3 AL072_21150 PF00724 NADH:flavin oxidoreductase / NADH oxidase family AL072_21155 PF03358 NADPH-dependent FMN reductase AL072_21155 PF04205 FMN-binding domain AL072_21155 PF00890 FAD binding domain AL072_21175 PF01408 Oxidoreductase family, NAD-binding Rossmann fold AL072_21175 PF02894 Oxidoreductase family, C-terminal alpha/beta domain AL072_21185 PF00890 FAD binding domain AL072_21190 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain AL072_21190 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain AL072_21205 PF02653 Branched-chain amino acid transport system / permease component AL072_21210 PF12399 Branched-chain amino acid ATP-binding cassette transporter AL072_21210 PF00005 ABC transporter AL072_21215 PF00005 ABC transporter AL072_21220 PF13458 Periplasmic binding protein AL072_21230 PF01494 FAD binding domain AL072_21235 PF07883 Cupin domain AL072_21240 PF14497 Glutathione S-transferase, C-terminal domain AL072_21240 PF02798 Glutathione S-transferase, N-terminal domain AL072_21245 PF01557 Fumarylacetoacetate (FAA) hydrolase family AL072_21250 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AL072_21250 PF03466 LysR substrate binding domain AL072_21260 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle AL072_21265 PF00528 Binding-protein-dependent transport system inner membrane component AL072_21275 PF08352 Oligopeptide/dipeptide transporter, C-terminal region AL072_21275 PF00005 ABC transporter AL072_21285 PF00491 Arginase family AL072_21295 PF07687 Peptidase dimerisation domain AL072_21295 PF01546 Peptidase family M20/M25/M40 AL072_21300 PF00501 AMP-binding enzyme AL072_21300 PF13193 AMP-binding enzyme C-terminal domain AL072_21325 PF01380 SIS domain AL072_21330 PF00132 Bacterial transferase hexapeptide (six repeats) AL072_21330 PF14602 Hexapeptide repeat of succinyl-transferase AL072_21330 PF12804 MobA-like NTP transferase domain AL072_21345 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain AL072_21345 PF07992 Pyridine nucleotide-disulphide oxidoreductase AL072_21355 PF05067 Manganese containing catalase AL072_21360 PF07690 Major Facilitator Superfamily AL072_21365 PF01474 Class-II DAHP synthetase family AL072_21370 PF07831 Pyrimidine nucleoside phosphorylase C-terminal domain AL072_21370 PF00591 Glycosyl transferase family, a/b domain AL072_21370 PF02885 Glycosyl transferase family, helical bundle domain AL072_21375 PF01791 DeoC/LacD family aldolase AL072_21380 PF01048 Phosphorylase superfamily AL072_21385 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region AL072_21390 PF02446 4-alpha-glucanotransferase AL072_21400 PF00128 Alpha amylase, catalytic domain AL072_21400 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) AL072_21415 PF00128 Alpha amylase, catalytic domain AL072_21415 PF02806 Alpha amylase, C-terminal all-beta domain AL072_21415 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) AL072_21420 PF16657 Maltogenic Amylase, C-terminal domain AL072_21420 PF00128 Alpha amylase, catalytic domain AL072_21430 PF00392 Bacterial regulatory proteins, gntR family AL072_21430 PF00155 Aminotransferase class I and II AL072_21440 PF00691 OmpA family AL072_21445 PF00132 Bacterial transferase hexapeptide (six repeats) AL072_21450 PF01118 Semialdehyde dehydrogenase, NAD binding domain AL072_21450 PF02774 Semialdehyde dehydrogenase, dimerisation domain AL072_21455 PF00380 Ribosomal protein S9/S16 AL072_21460 PF00572 Ribosomal protein L13 AL072_21475 PF03781 Sulfatase-modifying factor enzyme 1 AL072_21480 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AL072_21480 PF03466 LysR substrate binding domain AL072_21485 PF02798 Glutathione S-transferase, N-terminal domain AL072_21495 PF00005 ABC transporter AL072_21500 PF00005 ABC transporter AL072_21500 PF12399 Branched-chain amino acid ATP-binding cassette transporter AL072_21510 PF02653 Branched-chain amino acid transport system / permease component AL072_21525 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily AL072_21545 PF03594 Benzoate membrane transport protein AL072_21550 PF07729 FCD domain AL072_21550 PF00392 Bacterial regulatory proteins, gntR family AL072_21555 PF00072 Response regulator receiver domain AL072_21555 PF01627 Hpt domain AL072_21555 PF00512 His Kinase A (phospho-acceptor) domain AL072_21555 PF00672 HAMP domain AL072_21555 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AL072_21555 PF17149 Periplasmic sensor domain found in signal transduction proteins AL072_21560 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AL072_21560 PF03466 LysR substrate binding domain AL072_21615 PF13193 AMP-binding enzyme C-terminal domain AL072_21615 PF00501 AMP-binding enzyme AL072_21620 PF02653 Branched-chain amino acid transport system / permease component AL072_21635 PF02803 Thiolase, C-terminal domain AL072_21635 PF00108 Thiolase, N-terminal domain AL072_21640 PF00005 ABC transporter AL072_21645 PF00005 ABC transporter AL072_21645 PF12399 Branched-chain amino acid ATP-binding cassette transporter AL072_21655 PF00465 Iron-containing alcohol dehydrogenase AL072_21675 PF02771 Acyl-CoA dehydrogenase, N-terminal domain AL072_21675 PF00441 Acyl-CoA dehydrogenase, C-terminal domain AL072_21675 PF02770 Acyl-CoA dehydrogenase, middle domain AL072_21685 PF02515 CoA-transferase family III AL072_21690 PF00501 AMP-binding enzyme AL072_21690 PF13193 AMP-binding enzyme C-terminal domain AL072_21695 PF00106 short chain dehydrogenase AL072_21705 PF07729 FCD domain AL072_21705 PF00392 Bacterial regulatory proteins, gntR family AL072_21710 PF05088 Bacterial NAD-glutamate dehydrogenase AL072_21715 PF12833 Helix-turn-helix domain AL072_21720 PF07715 TonB-dependent Receptor Plug Domain AL072_21720 PF00593 TonB dependent receptor AL072_21750 PF13614 AAA domain AL072_21755 PF17762 HTH domain found in ParB protein AL072_21755 PF02195 ParB-like nuclease domain AL072_21760 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle AL072_21775 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) AL072_21775 PF00072 Response regulator receiver domain AL072_21775 PF01627 Hpt domain AL072_21775 PF00512 His Kinase A (phospho-acceptor) domain AL072_21775 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AL072_21775 PF00672 HAMP domain AL072_21780 PF11412 Disulphide bond corrector protein DsbC AL072_21780 PF02683 Cytochrome C biogenesis protein transmembrane region AL072_21795 PF00115 Cytochrome C and Quinol oxidase polypeptide I AL072_21805 PF13442 Cytochrome C oxidase, cbb3-type, subunit III AL072_21815 PF00403 Heavy-metal-associated domain AL072_21820 PF00512 His Kinase A (phospho-acceptor) domain AL072_21820 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AL072_21820 PF08521 Two-component sensor kinase N-terminal AL072_21825 PF00072 Response regulator receiver domain AL072_21825 PF00486 Transcriptional regulatory protein, C terminal AL072_21830 PF00512 His Kinase A (phospho-acceptor) domain AL072_21830 PF00989 PAS fold AL072_21830 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AL072_21835 PF00072 Response regulator receiver domain AL072_21835 PF00196 Bacterial regulatory proteins, luxR family AL072_21840 PF13247 4Fe-4S dicluster domain AL072_21845 PF03916 Polysulphide reductase, NrfD AL072_21850 PF01568 Molydopterin dinucleotide binding domain AL072_21850 PF00384 Molybdopterin oxidoreductase AL072_21850 PF04879 Molybdopterin oxidoreductase Fe4S4 domain AL072_21855 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AL072_21855 PF00989 PAS fold AL072_21855 PF00512 His Kinase A (phospho-acceptor) domain AL072_21860 PF02954 Bacterial regulatory protein, Fis family AL072_21860 PF00072 Response regulator receiver domain AL072_21860 PF00158 Sigma-54 interaction domain AL072_21865 PF01144 Coenzyme A transferase AL072_21870 PF01144 Coenzyme A transferase AL072_21875 PF02667 Short chain fatty acid transporter AL072_21880 PF02803 Thiolase, C-terminal domain AL072_21880 PF00108 Thiolase, N-terminal domain AL072_21890 PF17200 Single Cache domain 2 AL072_21890 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain AL072_21890 PF00672 HAMP domain AL072_21895 PF13193 AMP-binding enzyme C-terminal domain AL072_21895 PF00501 AMP-binding enzyme AL072_21900 PF00528 Binding-protein-dependent transport system inner membrane component AL072_21905 PF08402 TOBE domain AL072_21905 PF00005 ABC transporter AL072_21915 PF00378 Enoyl-CoA hydratase/isomerase AL072_21925 PF06506 Propionate catabolism activator AL072_21925 PF00158 Sigma-54 interaction domain AL072_21925 PF02954 Bacterial regulatory protein, Fis family AL072_21930 PF02515 CoA-transferase family III AL072_21935 PF00682 HMGL-like AL072_21940 PF00501 AMP-binding enzyme AL072_21940 PF13193 AMP-binding enzyme C-terminal domain AL072_21945 PF02771 Acyl-CoA dehydrogenase, N-terminal domain AL072_21945 PF00441 Acyl-CoA dehydrogenase, C-terminal domain AL072_21945 PF02770 Acyl-CoA dehydrogenase, middle domain AL072_21960 PF00005 ABC transporter AL072_21960 PF12399 Branched-chain amino acid ATP-binding cassette transporter AL072_21965 PF00005 ABC transporter AL072_21985 PF00378 Enoyl-CoA hydratase/isomerase AL072_21995 PF02653 Branched-chain amino acid transport system / permease component AL072_22000 PF00005 ABC transporter AL072_22005 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family AL072_22010 PF02626 Carboxyltransferase domain, subdomain A and B AL072_22020 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain AL072_22020 PF00289 Biotin carboxylase, N-terminal domain AL072_22020 PF02785 Biotin carboxylase C-terminal domain AL072_22025 PF00364 Biotin-requiring enzyme AL072_22030 PF03746 LamB/YcsF family AL072_22035 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AL072_22035 PF03466 LysR substrate binding domain AL072_22040 PF01012 Electron transfer flavoprotein domain AL072_22040 PF00766 Electron transfer flavoprotein FAD-binding domain AL072_22045 PF01012 Electron transfer flavoprotein domain AL072_22050 PF03328 HpcH/HpaI aldolase/citrate lyase family AL072_22060 PF01565 FAD binding domain AL072_22060 PF02913 FAD linked oxidases, C-terminal domain AL072_22065 PF00171 Aldehyde dehydrogenase family AL072_22070 PF08546 Ketopantoate reductase PanE/ApbA C terminal AL072_22070 PF02558 Ketopantoate reductase PanE/ApbA AL072_22075 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component AL072_22085 PF03480 Bacterial extracellular solute-binding protein, family 7 AL072_22090 PF02779 Transketolase, pyrimidine binding domain AL072_22090 PF00676 Dehydrogenase E1 component AL072_22090 PF16078 2-oxoglutarate dehydrogenase N-terminus AL072_22090 PF16870 2-oxoglutarate dehydrogenase C-terminal AL072_22095 PF02770 Acyl-CoA dehydrogenase, middle domain AL072_22095 PF02771 Acyl-CoA dehydrogenase, N-terminal domain AL072_22095 PF00441 Acyl-CoA dehydrogenase, C-terminal domain AL072_22110 PF02515 CoA-transferase family III AL072_22130 PF00892 EamA-like transporter family AL072_22140 PF02653 Branched-chain amino acid transport system / permease component AL072_22145 PF12399 Branched-chain amino acid ATP-binding cassette transporter AL072_22145 PF00005 ABC transporter AL072_22150 PF00005 ABC transporter AL072_22160 PF00654 Voltage gated chloride channel AL072_22165 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AL072_22165 PF03466 LysR substrate binding domain AL072_22180 PF02261 Aspartate decarboxylase AL072_22190 PF00574 Clp protease AL072_22195 PF00535 Glycosyl transferase family 2 AL072_22210 PF00873 AcrB/AcrD/AcrF family AL072_22215 PF00072 Response regulator receiver domain AL072_22215 PF02954 Bacterial regulatory protein, Fis family AL072_22215 PF00158 Sigma-54 interaction domain AL072_22230 PF00925 GTP cyclohydrolase II AL072_22235 PF02585 GlcNAc-PI de-N-acetylase AL072_22260 PF13434 L-lysine 6-monooxygenase (NADPH-requiring) AL072_22275 PF00593 TonB dependent receptor AL072_22275 PF07715 TonB-dependent Receptor Plug Domain AL072_22285 PF01032 FecCD transport family AL072_22295 PF00005 ABC transporter AL072_22300 PF03621 MbtH-like protein AL072_22305 PF00975 Thioesterase domain AL072_22310 PF02668 Taurine catabolism dioxygenase TauD, TfdA family AL072_22315 PF00501 AMP-binding enzyme AL072_22315 PF13193 AMP-binding enzyme C-terminal domain AL072_22315 PF08241 Methyltransferase domain AL072_22315 PF00668 Condensation domain AL072_22315 PF00391 PEP-utilising enzyme, mobile domain AL072_22315 PF00975 Thioesterase domain AL072_22315 PF00550 Phosphopantetheine attachment site AL072_22320 PF00501 AMP-binding enzyme AL072_22320 PF13193 AMP-binding enzyme C-terminal domain AL072_22320 PF00668 Condensation domain AL072_22320 PF00975 Thioesterase domain AL072_22320 PF00550 Phosphopantetheine attachment site AL072_22330 PF00005 ABC transporter AL072_22330 PF00664 ABC transporter transmembrane region AL072_22350 PF07859 alpha/beta hydrolase fold AL072_22360 PF08281 Sigma-70, region 4 AL072_22360 PF04542 Sigma-70 region 2 AL072_22365 PF09339 IclR helix-turn-helix domain AL072_22365 PF01614 Bacterial transcriptional regulator AL072_22370 PF00171 Aldehyde dehydrogenase family AL072_22380 PF02515 CoA-transferase family III AL072_22385 PF03358 NADPH-dependent FMN reductase AL072_22385 PF00890 FAD binding domain AL072_22385 PF04205 FMN-binding domain AL072_22395 PF00285 Citrate synthase, C-terminal domain AL072_22400 PF00005 ABC transporter AL072_22400 PF12399 Branched-chain amino acid ATP-binding cassette transporter AL072_22405 PF00005 ABC transporter AL072_22410 PF02653 Branched-chain amino acid transport system / permease component AL072_22420 PF01012 Electron transfer flavoprotein domain AL072_22425 PF01012 Electron transfer flavoprotein domain AL072_22425 PF00766 Electron transfer flavoprotein FAD-binding domain AL072_22430 PF00108 Thiolase, N-terminal domain AL072_22430 PF02803 Thiolase, C-terminal domain AL072_22435 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AL072_22435 PF03466 LysR substrate binding domain AL072_22440 PF02770 Acyl-CoA dehydrogenase, middle domain AL072_22440 PF00441 Acyl-CoA dehydrogenase, C-terminal domain AL072_22440 PF02771 Acyl-CoA dehydrogenase, N-terminal domain AL072_22445 PF00583 Acetyltransferase (GNAT) family AL072_22445 PF13380 CoA binding domain AL072_22445 PF13607 Succinyl-CoA ligase like flavodoxin domain AL072_22455 PF00561 alpha/beta hydrolase fold AL072_22465 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain AL072_22465 PF00378 Enoyl-CoA hydratase/isomerase AL072_22465 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain AL072_22470 PF00171 Aldehyde dehydrogenase family AL072_22480 PF01288 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK) AL072_22495 PF00034 Cytochrome c AL072_22500 PF11940 Domain of unknown function (DUF3458) Ig-like fold AL072_22500 PF01433 Peptidase family M1 domain AL072_22500 PF17432 Domain of unknown function (DUF3458_C) ARM repeats AL072_22530 PF01521 Iron-sulphur cluster biosynthesis AL072_22535 PF01966 HD domain AL072_22535 PF13286 Phosphohydrolase-associated domain AL072_22540 PF03485 Arginyl tRNA synthetase N terminal domain AL072_22540 PF05746 DALR anticodon binding domain AL072_22540 PF00750 tRNA synthetases class I (R) AL072_22550 PF00933 Glycosyl hydrolase family 3 N terminal domain AL072_22555 PF02163 Peptidase family M50 AL072_22560 PF02616 Segregation and condensation protein ScpA AL072_22565 PF04079 Segregation and condensation complex subunit ScpB AL072_22570 PF02416 mttA/Hcf106 family AL072_22575 PF02416 mttA/Hcf106 family AL072_22580 PF00902 Sec-independent protein translocase protein (TatC) AL072_22585 PF02272 DHHA1 domain AL072_22585 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain AL072_22585 PF01411 tRNA synthetases class II (A) AL072_22610 PF14398 YheC/D like ATP-grasp AL072_22615 PF13439 Glycosyltransferase Family 4 AL072_22635 PF00149 Calcineurin-like phosphoesterase AL072_22635 PF12320 Type 5 capsule protein repressor C-terminal domain AL072_22705 PF02569 Pantoate-beta-alanine ligase AL072_22715 PF07969 Amidohydrolase family AL072_22725 PF02653 Branched-chain amino acid transport system / permease component AL072_22740 PF01614 Bacterial transcriptional regulator AL072_22740 PF09339 IclR helix-turn-helix domain AL072_22745 PF08402 TOBE domain AL072_22745 PF00005 ABC transporter AL072_22750 PF00528 Binding-protein-dependent transport system inner membrane component AL072_22755 PF00528 Binding-protein-dependent transport system inner membrane component AL072_22765 PF07992 Pyridine nucleotide-disulphide oxidoreductase AL072_22765 PF04324 BFD-like [2Fe-2S] binding domain AL072_22770 PF01266 FAD dependent oxidoreductase AL072_22785 PF07995 Glucose / Sorbosone dehydrogenase AL072_22790 PF07729 FCD domain AL072_22790 PF00392 Bacterial regulatory proteins, gntR family AL072_22805 PF16957 Malonate decarboxylase, alpha subunit, transporter AL072_22810 PF06857 Malonate decarboxylase delta subunit (MdcD) AL072_22815 PF01039 Carboxyl transferase domain AL072_22825 PF10620 Phosphoribosyl-dephospho-CoA transferase MdcG AL072_22830 PF01874 ATP:dephospho-CoA triphosphoribosyl transferase AL072_22850 PF00248 Aldo/keto reductase family AL072_22855 PF01408 Oxidoreductase family, NAD-binding Rossmann fold AL072_22855 PF02894 Oxidoreductase family, C-terminal alpha/beta domain AL072_22860 PF00528 Binding-protein-dependent transport system inner membrane component AL072_22870 PF00149 Calcineurin-like phosphoesterase AL072_22875 PF00005 ABC transporter AL072_22875 PF08402 TOBE domain AL072_22880 PF00528 Binding-protein-dependent transport system inner membrane component AL072_22885 PF00528 Binding-protein-dependent transport system inner membrane component AL072_22890 PF01547 Bacterial extracellular solute-binding protein AL072_22895 PF00356 Bacterial regulatory proteins, lacI family AL072_22910 PF05015 RelE-like toxin of type II toxin-antitoxin system HigB AL072_22915 PF01381 Helix-turn-helix AL072_22965 PF00005 ABC transporter AL072_22975 PF00528 Binding-protein-dependent transport system inner membrane component AL072_22980 PF07690 Major Facilitator Superfamily AL072_22990 PF17926 Tetracyclin repressor-like, C-terminal domain AL072_22990 PF00440 Bacterial regulatory proteins, tetR family AL072_22995 PF00248 Aldo/keto reductase family AL072_23010 PF13614 AAA domain AL072_23015 PF00512 His Kinase A (phospho-acceptor) domain AL072_23015 PF00989 PAS fold AL072_23015 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AL072_23020 PF06745 KaiC AL072_23025 PF00486 Transcriptional regulatory protein, C terminal AL072_23025 PF00072 Response regulator receiver domain AL072_23030 PF00171 Aldehyde dehydrogenase family AL072_23035 PF00441 Acyl-CoA dehydrogenase, C-terminal domain AL072_23035 PF02771 Acyl-CoA dehydrogenase, N-terminal domain AL072_23035 PF02770 Acyl-CoA dehydrogenase, middle domain AL072_23040 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase AL072_23040 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase AL072_23065 PF05860 haemagglutination activity domain AL072_23070 PF04209 homogentisate 1,2-dioxygenase AL072_23080 PF00005 ABC transporter AL072_23080 PF00027 Cyclic nucleotide-binding domain AL072_23085 PF00005 ABC transporter AL072_23085 PF08352 Oligopeptide/dipeptide transporter, C-terminal region AL072_23095 PF00528 Binding-protein-dependent transport system inner membrane component AL072_23100 PF12911 N-terminal TM domain of oligopeptide transport permease C AL072_23100 PF00528 Binding-protein-dependent transport system inner membrane component AL072_23110 PF00534 Glycosyl transferases group 1 AL072_23115 PF13439 Glycosyltransferase Family 4 AL072_23115 PF00534 Glycosyl transferases group 1 AL072_23120 PF00300 Histidine phosphatase superfamily (branch 1) AL072_23135 PF03466 LysR substrate binding domain AL072_23135 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AL072_23145 PF01047 MarR family AL072_23155 PF03466 LysR substrate binding domain AL072_23155 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AL072_23160 PF00578 AhpC/TSA family AL072_23170 PF05114 Protein of unknown function (DUF692) AL072_23195 PF00150 Cellulase (glycosyl hydrolase family 5) AL072_23200 PF00005 ABC transporter AL072_23205 PF00528 Binding-protein-dependent transport system inner membrane component AL072_23210 PF00528 Binding-protein-dependent transport system inner membrane component AL072_23215 PF00497 Bacterial extracellular solute-binding proteins, family 3 AL072_23230 PF00043 Glutathione S-transferase, C-terminal domain AL072_23230 PF02798 Glutathione S-transferase, N-terminal domain AL072_23235 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AL072_23235 PF03466 LysR substrate binding domain AL072_23270 PF00224 Pyruvate kinase, barrel domain AL072_23270 PF02887 Pyruvate kinase, alpha/beta domain AL072_23305 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AL072_23305 PF03466 LysR substrate binding domain AL072_23310 PF07690 Major Facilitator Superfamily AL072_23315 PF00248 Aldo/keto reductase family AL072_23320 PF00654 Voltage gated chloride channel AL072_23345 PF00005 ABC transporter AL072_23375 PF00664 ABC transporter transmembrane region AL072_23375 PF00005 ABC transporter AL072_23380 PF00005 ABC transporter AL072_23380 PF00664 ABC transporter transmembrane region AL072_23385 PF00403 Heavy-metal-associated domain AL072_23400 PF01144 Coenzyme A transferase AL072_23405 PF01144 Coenzyme A transferase AL072_23410 PF00106 short chain dehydrogenase AL072_23415 PF00027 Cyclic nucleotide-binding domain AL072_23415 PF13545 Crp-like helix-turn-helix domain AL072_23425 PF02624 YcaO cyclodehydratase, ATP-ad Mg2+-binding AL072_23445 PF00920 Dehydratase family AL072_23450 PF01047 MarR family AL072_23455 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion AL072_23455 PF00529 HlyD membrane-fusion protein of T1SS AL072_23460 PF07690 Major Facilitator Superfamily AL072_23495 PF13192 Thioredoxin domain AL072_23495 PF07992 Pyridine nucleotide-disulphide oxidoreductase AL072_23500 PF00578 AhpC/TSA family AL072_23500 PF10417 C-terminal domain of 1-Cys peroxiredoxin AL072_23505 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AL072_23505 PF03466 LysR substrate binding domain AL072_23510 PF00690 Cation transporter/ATPase, N-terminus AL072_23510 PF00689 Cation transporting ATPase, C-terminus AL072_23515 PF02153 Prephenate dehydrogenase AL072_23525 PF01965 DJ-1/PfpI family AL072_23530 PF00463 Isocitrate lyase family AL072_23535 PF09856 Predicted transcriptional regulator (DUF2083) AL072_23535 PF06114 IrrE N-terminal-like domain AL072_23535 PF01381 Helix-turn-helix AL072_23540 PF00175 Oxidoreductase NAD-binding domain AL072_23540 PF00970 Oxidoreductase FAD-binding domain AL072_23550 PF01810 LysE type translocator AL072_23555 PF05173 Dihydrodipicolinate reductase, C-terminus AL072_23555 PF01113 Dihydrodipicolinate reductase, N-terminus AL072_23560 PF01297 Zinc-uptake complex component A periplasmic AL072_23565 PF00005 ABC transporter AL072_23570 PF00950 ABC 3 transport family AL072_23575 PF13491 4TM region of DNA translocase FtsK/SpoIIIE AL072_23575 PF17854 FtsK alpha domain AL072_23575 PF01580 FtsK/SpoIIIE family AL072_23590 PF00543 Nitrogen regulatory protein P-II AL072_23595 PF01494 FAD binding domain AL072_23605 PF12625 Arabinose-binding domain of AraC transcription regulator, N-term AL072_23605 PF12833 Helix-turn-helix domain AL072_23615 PF01494 FAD binding domain AL072_23625 PF00132 Bacterial transferase hexapeptide (six repeats) AL072_23625 PF06426 Serine acetyltransferase, N-terminal AL072_23630 PF01799 [2Fe-2S] binding domain AL072_23630 PF00111 2Fe-2S iron-sulfur cluster binding domain AL072_23635 PF03450 CO dehydrogenase flavoprotein C-terminal domain AL072_23635 PF00941 FAD binding domain in molybdopterin dehydrogenase AL072_23640 PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase AL072_23640 PF01315 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain AL072_23650 PF01810 LysE type translocator AL072_23655 PF07690 Major Facilitator Superfamily AL072_23670 PF03975 CheD chemotactic sensory transduction AL072_23685 PF00849 RNA pseudouridylate synthase AL072_23690 PF00483 Nucleotidyl transferase AL072_23695 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain AL072_23695 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain AL072_23695 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain AL072_23700 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I AL072_23700 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II AL072_23700 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III AL072_23700 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain AL072_23710 PF00005 ABC transporter AL072_23715 PF13533 Biotin-lipoyl like AL072_23720 PF10996 Beta-Casp domain AL072_23720 PF07521 Zn-dependent metallo-hydrolase RNA specificity domain AL072_23720 PF00753 Metallo-beta-lactamase superfamily AL072_23725 PF02885 Glycosyl transferase family, helical bundle domain AL072_23725 PF00591 Glycosyl transferase family, a/b domain AL072_23725 PF07831 Pyrimidine nucleoside phosphorylase C-terminal domain AL072_23730 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family AL072_23730 PF00356 Bacterial regulatory proteins, lacI family AL072_23745 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component AL072_23750 PF03480 Bacterial extracellular solute-binding protein, family 7 AL072_23755 PF00672 HAMP domain AL072_23755 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain AL072_23765 PF12391 Protocatechuate 3,4-dioxygenase beta subunit N terminal AL072_23765 PF00775 Dioxygenase AL072_23770 PF00206 Lyase AL072_23770 PF10397 Adenylosuccinate lyase C-terminus AL072_23775 PF02627 Carboxymuconolactone decarboxylase family AL072_23780 PF12146 Serine aminopeptidase, S33 AL072_23785 PF02803 Thiolase, C-terminal domain AL072_23785 PF00108 Thiolase, N-terminal domain AL072_23790 PF01144 Coenzyme A transferase AL072_23795 PF01144 Coenzyme A transferase AL072_23800 PF13458 Periplasmic binding protein AL072_23815 PF12399 Branched-chain amino acid ATP-binding cassette transporter AL072_23815 PF00005 ABC transporter AL072_23820 PF00005 ABC transporter AL072_23825 PF00497 Bacterial extracellular solute-binding proteins, family 3 AL072_23830 PF12729 Four helix bundle sensory module for signal transduction AL072_23830 PF00672 HAMP domain AL072_23830 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain AL072_23835 PF00072 Response regulator receiver domain AL072_23835 PF00486 Transcriptional regulatory protein, C terminal AL072_23840 PF00005 ABC transporter AL072_23845 PF00528 Binding-protein-dependent transport system inner membrane component AL072_23850 PF00528 Binding-protein-dependent transport system inner membrane component AL072_23855 PF00497 Bacterial extracellular solute-binding proteins, family 3 AL072_23865 PF07715 TonB-dependent Receptor Plug Domain AL072_23870 PF00005 ABC transporter AL072_23875 PF01032 FecCD transport family AL072_23880 PF01032 FecCD transport family AL072_23900 PF02749 Quinolinate phosphoribosyl transferase, N-terminal domain AL072_23900 PF01729 Quinolinate phosphoribosyl transferase, C-terminal domain AL072_23910 PF02445 Quinolinate synthetase A protein AL072_23925 PF04879 Molybdopterin oxidoreductase Fe4S4 domain AL072_23925 PF00384 Molybdopterin oxidoreductase AL072_23925 PF01568 Molydopterin dinucleotide binding domain AL072_23930 PF13247 4Fe-4S dicluster domain AL072_23935 PF01292 Prokaryotic cytochrome b561 AL072_23940 PF00171 Aldehyde dehydrogenase family AL072_23955 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AL072_23955 PF00512 His Kinase A (phospho-acceptor) domain AL072_23955 PF00989 PAS fold AL072_23975 PF00108 Thiolase, N-terminal domain AL072_23975 PF02803 Thiolase, C-terminal domain AL072_23980 PF03061 Thioesterase superfamily AL072_23985 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain AL072_23985 PF18321 3-hydroxybutyryl-CoA dehydrogenase reduced Rossmann-fold domain AL072_23985 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain AL072_23990 PF00378 Enoyl-CoA hydratase/isomerase AL072_23995 PF00171 Aldehyde dehydrogenase family AL072_24000 PF00111 2Fe-2S iron-sulfur cluster binding domain AL072_24000 PF00970 Oxidoreductase FAD-binding domain AL072_24000 PF00175 Oxidoreductase NAD-binding domain AL072_24005 PF01883 Iron-sulfur cluster assembly protein AL072_24010 PF05138 Phenylacetic acid catabolic protein AL072_24015 PF06243 Phenylacetic acid degradation B AL072_24020 PF05138 Phenylacetic acid catabolic protein AL072_24035 PF01627 Hpt domain AL072_24035 PF00072 Response regulator receiver domain AL072_24035 PF00512 His Kinase A (phospho-acceptor) domain AL072_24035 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AL072_24050 PF02566 OsmC-like protein AL072_24070 PF04055 Radical SAM superfamily AL072_24070 PF18693 TRAM domain AL072_24070 PF00919 Uncharacterized protein family UPF0004 AL072_24095 PF07733 Bacterial DNA polymerase III alpha NTPase domain AL072_24095 PF02811 PHP domain AL072_24095 PF14579 Helix-hairpin-helix motif AL072_24095 PF17657 Bacterial DNA polymerase III alpha subunit finger domain AL072_24105 PF00892 EamA-like transporter family AL072_24110 PF08448 PAS fold AL072_24110 PF13188 PAS domain AL072_24110 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AL072_24110 PF00072 Response regulator receiver domain AL072_24110 PF00512 His Kinase A (phospho-acceptor) domain AL072_24130 PF05433 Glycine zipper 2TM domain AL072_24130 PF16998 17 kDa outer membrane surface antigen AL072_24135 PF00072 Response regulator receiver domain AL072_24140 PF00072 Response regulator receiver domain AL072_24140 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AL072_24140 PF09456 RcsC Alpha-Beta-Loop (ABL) AL072_24140 PF00512 His Kinase A (phospho-acceptor) domain AL072_24145 PF00072 Response regulator receiver domain AL072_24145 PF00196 Bacterial regulatory proteins, luxR family AL072_24155 PF01627 Hpt domain AL072_24155 PF00512 His Kinase A (phospho-acceptor) domain AL072_24155 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AL072_24155 PF00672 HAMP domain AL072_24155 PF17149 Periplasmic sensor domain found in signal transduction proteins AL072_24155 PF00072 Response regulator receiver domain AL072_24160 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain AL072_24170 PF01618 MotA/TolQ/ExbB proton channel family AL072_24175 PF02472 Biopolymer transport protein ExbD/TolR AL072_24190 PF01569 PAP2 superfamily AL072_24195 PF01842 ACT domain AL072_24195 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain AL072_24195 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain AL072_24200 PF01259 SAICAR synthetase AL072_24210 PF03572 Peptidase family S41 AL072_24210 PF13180 PDZ domain AL072_24220 PF00586 AIR synthase related protein, N-terminal domain AL072_24220 PF02769 AIR synthase related protein, C-terminal domain AL072_24225 PF01455 HupF/HypC family AL072_24230 PF02492 CobW/HypB/UreG, nucleotide-binding domain AL072_24235 PF00374 Nickel-dependent hydrogenase AL072_24250 PF03631 Virulence factor BrkB AL072_24260 PF05962 HutD AL072_24265 PF12833 Helix-turn-helix domain AL072_24265 PF02311 AraC-like ligand binding domain AL072_24270 PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase AL072_24270 PF01315 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain AL072_24275 PF03450 CO dehydrogenase flavoprotein C-terminal domain AL072_24275 PF00941 FAD binding domain in molybdopterin dehydrogenase AL072_24280 PF00111 2Fe-2S iron-sulfur cluster binding domain AL072_24280 PF01799 [2Fe-2S] binding domain AL072_24285 PF00501 AMP-binding enzyme AL072_24285 PF13193 AMP-binding enzyme C-terminal domain AL072_24290 PF00378 Enoyl-CoA hydratase/isomerase AL072_24300 PF02653 Branched-chain amino acid transport system / permease component AL072_24310 PF12399 Branched-chain amino acid ATP-binding cassette transporter AL072_24310 PF00005 ABC transporter AL072_24315 PF00005 ABC transporter AL072_24325 PF04262 Glutamate-cysteine ligase AL072_24325 PF01071 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain AL072_24325 PF18419 ATP-grasp-like domain AL072_24330 PF00441 Acyl-CoA dehydrogenase, C-terminal domain AL072_24330 PF02771 Acyl-CoA dehydrogenase, N-terminal domain AL072_24330 PF02770 Acyl-CoA dehydrogenase, middle domain AL072_24340 PF00872 Transposase, Mutator family AL072_24355 PF00691 OmpA family AL072_24355 PF01389 OmpA-like transmembrane domain AL072_24430 PF09383 NIL domain AL072_24430 PF00005 ABC transporter AL072_24445 PF01609 Transposase DDE domain AL072_24455 PF13378 Enolase C-terminal domain-like AL072_24460 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AL072_24460 PF03466 LysR substrate binding domain AL072_24480 PF02874 ATP synthase alpha/beta family, beta-barrel domain AL072_24480 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain AL072_24480 PF18269 T3SS EscN ATPase C-terminal domain AL072_24485 PF00072 Response regulator receiver domain AL072_24485 PF00486 Transcriptional regulatory protein, C terminal AL072_24490 PF00313 'Cold-shock' DNA-binding domain AL072_24505 PF01739 CheR methyltransferase, SAM binding domain AL072_24505 PF03705 CheR methyltransferase, all-alpha domain AL072_24510 PF01339 CheB methylesterase AL072_24510 PF00072 Response regulator receiver domain AL072_24515 PF00989 PAS fold AL072_24515 PF18415 Histidine kinase receptor ArcB trans-membrane domain AL072_24515 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AL072_24515 PF00512 His Kinase A (phospho-acceptor) domain AL072_24515 PF01627 Hpt domain AL072_24515 PF00072 Response regulator receiver domain AL072_24520 PF01584 CheW-like domain AL072_24525 PF01627 Hpt domain AL072_24525 PF01584 CheW-like domain AL072_24525 PF02895 Signal transducing histidine kinase, homodimeric domain AL072_24525 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AL072_24525 PF07194 P2 response regulator binding domain AL072_24530 PF10090 Histidine phosphotransferase C-terminal domain AL072_24545 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AL072_24545 PF00512 His Kinase A (phospho-acceptor) domain AL072_24545 PF02743 Cache domain AL072_24550 PF00158 Sigma-54 interaction domain AL072_24550 PF02954 Bacterial regulatory protein, Fis family AL072_24550 PF00072 Response regulator receiver domain AL072_24560 PF00528 Binding-protein-dependent transport system inner membrane component AL072_24565 PF00005 ABC transporter AL072_24565 PF08402 TOBE domain AL072_24570 PF13419 Haloacid dehalogenase-like hydrolase AL072_24595 PF00672 HAMP domain AL072_24595 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain AL072_24605 PF00005 ABC transporter AL072_24610 PF12399 Branched-chain amino acid ATP-binding cassette transporter AL072_24610 PF00005 ABC transporter AL072_24620 PF02653 Branched-chain amino acid transport system / permease component AL072_24625 PF01262 Alanine dehydrogenase/PNT, C-terminal domain AL072_24625 PF05222 Alanine dehydrogenase/PNT, N-terminal domain AL072_24630 PF01037 Lrp/AsnC ligand binding domain AL072_24635 PF11799 impB/mucB/samB family C-terminal domain AL072_24635 PF00817 impB/mucB/samB family AL072_24640 PF01037 Lrp/AsnC ligand binding domain AL072_24645 PF01810 LysE type translocator AL072_24650 PF00072 Response regulator receiver domain AL072_24650 PF00196 Bacterial regulatory proteins, luxR family AL072_24655 PF00512 His Kinase A (phospho-acceptor) domain AL072_24655 PF09308 LuxQ, periplasmic AL072_24655 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AL072_24655 PF00072 Response regulator receiver domain AL072_24685 PF01384 Phosphate transporter family AL072_24695 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AL072_24695 PF00989 PAS fold AL072_24695 PF00512 His Kinase A (phospho-acceptor) domain AL072_24705 PF00072 Response regulator receiver domain AL072_24705 PF13188 PAS domain AL072_24705 PF08448 PAS fold AL072_24705 PF00512 His Kinase A (phospho-acceptor) domain AL072_24705 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AL072_24710 PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain AL072_24710 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain AL072_24720 PF14698 Argininosuccinate lyase C-terminal AL072_24720 PF00206 Lyase AL072_24725 PF08534 Redoxin AL072_24730 PF00027 Cyclic nucleotide-binding domain AL072_24730 PF13302 Acetyltransferase (GNAT) domain AL072_24735 PF00440 Bacterial regulatory proteins, tetR family AL072_24740 PF00248 Aldo/keto reductase family AL072_24745 PF05161 MOFRL family AL072_24745 PF13660 Domain of unknown function (DUF4147) AL072_24750 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase AL072_24750 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase AL072_24755 PF01261 Xylose isomerase-like TIM barrel AL072_24760 PF00724 NADH:flavin oxidoreductase / NADH oxidase family AL072_24760 PF07992 Pyridine nucleotide-disulphide oxidoreductase AL072_24765 PF07729 FCD domain AL072_24765 PF00392 Bacterial regulatory proteins, gntR family AL072_24770 PF02894 Oxidoreductase family, C-terminal alpha/beta domain AL072_24770 PF01408 Oxidoreductase family, NAD-binding Rossmann fold AL072_24775 PF03741 Integral membrane protein TerC family AL072_24780 PF03480 Bacterial extracellular solute-binding protein, family 7 AL072_24790 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component AL072_24800 PF01979 Amidohydrolase family AL072_24805 PF00440 Bacterial regulatory proteins, tetR family AL072_24805 PF08362 YcdC-like protein, C-terminal region AL072_24810 PF07687 Peptidase dimerisation domain AL072_24810 PF01546 Peptidase family M20/M25/M40 AL072_24815 PF01180 Dihydroorotate dehydrogenase AL072_24820 PF07992 Pyridine nucleotide-disulphide oxidoreductase AL072_24820 PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster AL072_24820 PF10589 NADH-ubiquinone oxidoreductase-F iron-sulfur binding region AL072_24825 PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain AL072_24825 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain AL072_24835 PF00440 Bacterial regulatory proteins, tetR family AL072_24840 PF00294 pfkB family carbohydrate kinase AL072_24850 PF04295 D-galactarate dehydratase / Altronate hydrolase, C terminus AL072_24850 PF08666 SAF domain AL072_24855 PF02614 Glucuronate isomerase AL072_24860 PF07729 FCD domain AL072_24860 PF00392 Bacterial regulatory proteins, gntR family AL072_24865 PF07883 Cupin domain AL072_24875 PF04962 KduI/IolB family AL072_24880 PF02142 MGS-like domain AL072_24885 PF07729 FCD domain AL072_24885 PF00392 Bacterial regulatory proteins, gntR family AL072_24895 PF03412 Peptidase C39 family AL072_24895 PF00005 ABC transporter AL072_24895 PF00664 ABC transporter transmembrane region AL072_24900 PF03412 Peptidase C39 family AL072_24900 PF00005 ABC transporter AL072_24900 PF00664 ABC transporter transmembrane region AL072_24910 PF00232 Glycosyl hydrolase family 1 AL072_24920 PF00860 Permease family AL072_24935 PF12697 Alpha/beta hydrolase family AL072_24940 PF01527 Transposase AL072_24965 PF13700 Domain of unknown function (DUF4158) AL072_24965 PF01526 Tn3 transposase DDE domain AL072_24970 PF00239 Resolvase, N terminal domain AL072_24970 PF02796 Helix-turn-helix domain of resolvase AL072_24980 PF07581 The GLUG motif AL072_24980 PF09479 Listeria-Bacteroides repeat domain (List_Bact_rpt) AL072_24985 PF00072 Response regulator receiver domain AL072_24985 PF00196 Bacterial regulatory proteins, luxR family AL072_25010 PF00872 Transposase, Mutator family AL072_25020 PF00872 Transposase, Mutator family AL072_25025 PF00534 Glycosyl transferases group 1 AL072_25025 PF13439 Glycosyltransferase Family 4 AL072_25090 PF02423 Ornithine cyclodeaminase/mu-crystallin family AL072_25100 PF01555 DNA methylase AL072_25100 PF18755 Restriction Enzyme Adenine Methylase Associated AL072_25105 PF01351 Ribonuclease HII AL072_25110 PF02810 SEC-C motif AL072_25115 PF00313 'Cold-shock' DNA-binding domain AL072_25120 PF08352 Oligopeptide/dipeptide transporter, C-terminal region AL072_25120 PF00005 ABC transporter AL072_25135 PF13091 PLD-like domain AL072_25135 PF13396 Phospholipase_D-nuclease N-terminal AL072_25150 PF13520 Amino acid permease AL072_25155 PF05985 Ethanolamine ammonia-lyase light chain (EutC) AL072_25160 PF06751 Ethanolamine ammonia lyase large subunit (EutB) AL072_25180 PF01810 LysE type translocator AL072_25185 PF00990 Diguanylate cyclase, GGDEF domain AL072_25185 PF00563 EAL domain AL072_25185 PF03707 Bacterial signalling protein N terminal repeat AL072_25190 PF00892 EamA-like transporter family AL072_25200 PF07568 Histidine kinase AL072_25200 PF13581 Histidine kinase-like ATPase domain AL072_25200 PF13426 PAS domain AL072_25215 PF04542 Sigma-70 region 2 AL072_25215 PF00140 Sigma-70 factor, region 1.2 AL072_25215 PF04545 Sigma-70, region 4 AL072_25230 PF01470 Pyroglutamyl peptidase AL072_25235 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AL072_25235 PF03466 LysR substrate binding domain AL072_25245 PF03466 LysR substrate binding domain AL072_25245 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AL072_25275 PF09339 IclR helix-turn-helix domain AL072_25280 PF02954 Bacterial regulatory protein, Fis family AL072_25280 PF00158 Sigma-54 interaction domain AL072_25280 PF13185 GAF domain AL072_25290 PF02653 Branched-chain amino acid transport system / permease component AL072_25300 PF00005 ABC transporter AL072_25305 PF00005 ABC transporter AL072_25305 PF12399 Branched-chain amino acid ATP-binding cassette transporter AL072_25320 PF07683 Cobalamin synthesis protein cobW C-terminal domain AL072_25320 PF02492 CobW/HypB/UreG, nucleotide-binding domain AL072_25325 PF02514 CobN/Magnesium Chelatase AL072_25330 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain AL072_25335 PF02570 Precorrin-8X methylmutase AL072_25340 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases AL072_25345 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases AL072_25350 PF02571 Precorrin-6x reductase CbiJ/CobK AL072_25355 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases AL072_25365 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases AL072_25370 PF01888 CbiD AL072_25375 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases AL072_25380 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain AL072_25380 PF07685 CobB/CobQ-like glutamine amidotransferase domain AL072_25385 PF00881 Nitroreductase family AL072_25390 PF03070 TENA/THI-4/PQQC family AL072_25395 PF02659 Putative manganese efflux pump AL072_25400 PF01979 Amidohydrolase family AL072_25410 PF00440 Bacterial regulatory proteins, tetR family AL072_25415 PF13533 Biotin-lipoyl like AL072_25420 PF00873 AcrB/AcrD/AcrF family AL072_25440 PF00072 Response regulator receiver domain AL072_25450 PF06224 Winged helix DNA-binding domain AL072_25455 PF01037 Lrp/AsnC ligand binding domain AL072_25465 PF01526 Tn3 transposase DDE domain AL072_25465 PF13700 Domain of unknown function (DUF4158) AL072_25495 PF00872 Transposase, Mutator family AL072_25505 PF00072 Response regulator receiver domain AL072_25515 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily AL072_25520 PF01037 Lrp/AsnC ligand binding domain AL072_25540 PF01370 NAD dependent epimerase/dehydratase family AL072_25545 PF01370 NAD dependent epimerase/dehydratase family AL072_25550 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain AL072_25550 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain AL072_25550 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain AL072_25560 PF13807 G-rich domain on putative tyrosine kinase AL072_25560 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain AL072_25560 PF02706 Chain length determinant protein AL072_25575 PF00072 Response regulator receiver domain AL072_25580 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AL072_25580 PF00512 His Kinase A (phospho-acceptor) domain AL072_25585 PF00005 ABC transporter AL072_25600 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AL072_25600 PF01584 CheW-like domain AL072_25600 PF07194 P2 response regulator binding domain AL072_25600 PF02895 Signal transducing histidine kinase, homodimeric domain AL072_25600 PF01627 Hpt domain AL072_25610 PF01739 CheR methyltransferase, SAM binding domain AL072_25610 PF03705 CheR methyltransferase, all-alpha domain AL072_25620 PF00072 Response regulator receiver domain AL072_25620 PF01339 CheB methylesterase AL072_25625 PF01584 CheW-like domain AL072_25630 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain AL072_25630 PF00672 HAMP domain AL072_25635 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term AL072_25635 PF04509 CheC-like family AL072_25640 PF01339 CheB methylesterase AL072_25640 PF00072 Response regulator receiver domain AL072_25650 PF03180 NLPA lipoprotein AL072_25655 PF00528 Binding-protein-dependent transport system inner membrane component AL072_25660 PF09383 NIL domain AL072_25660 PF00005 ABC transporter AL072_25665 PF03180 NLPA lipoprotein AL072_25675 PF01634 ATP phosphoribosyltransferase AL072_25680 PF00815 Histidinol dehydrogenase AL072_25685 PF06793 Uncharacterised protein family (UPF0262) AL072_25690 PF01451 Low molecular weight phosphotyrosine protein phosphatase AL072_25705 PF01176 Translation initiation factor 1A / IF-1 AL072_25710 PF02545 Maf-like protein AL072_25715 PF10150 Ribonuclease E/G family AL072_25730 PF07729 FCD domain AL072_25730 PF00392 Bacterial regulatory proteins, gntR family AL072_25740 PF03601 Conserved hypothetical protein 698 AL072_25755 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain AL072_25755 PF00205 Thiamine pyrophosphate enzyme, central domain AL072_25755 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain AL072_25760 PF00732 GMC oxidoreductase AL072_25760 PF05199 GMC oxidoreductase AL072_25770 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AL072_25770 PF03466 LysR substrate binding domain AL072_25775 PF01039 Carboxyl transferase domain AL072_25800 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component AL072_25805 PF00753 Metallo-beta-lactamase superfamily AL072_25820 PF00364 Biotin-requiring enzyme AL072_25825 PF00364 Biotin-requiring enzyme AL072_25825 PF02436 Conserved carboxylase domain AL072_25825 PF00682 HMGL-like AL072_25830 PF00392 Bacterial regulatory proteins, gntR family AL072_25830 PF07702 UTRA domain AL072_25835 PF02785 Biotin carboxylase C-terminal domain AL072_25835 PF00289 Biotin carboxylase, N-terminal domain AL072_25835 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain AL072_25840 PF00583 Acetyltransferase (GNAT) family AL072_25840 PF13380 CoA binding domain AL072_25840 PF13607 Succinyl-CoA ligase like flavodoxin domain AL072_25850 PF13533 Biotin-lipoyl like AL072_25855 PF00873 AcrB/AcrD/AcrF family AL072_25860 PF00873 AcrB/AcrD/AcrF family AL072_25865 PF04542 Sigma-70 region 2 AL072_25865 PF08281 Sigma-70, region 4 AL072_25885 PF02810 SEC-C motif AL072_25900 PF00291 Pyridoxal-phosphate dependent enzyme AL072_25905 PF02567 Phenazine biosynthesis-like protein AL072_25920 PF01494 FAD binding domain AL072_25940 PF00583 Acetyltransferase (GNAT) family AL072_25945 PF04542 Sigma-70 region 2 AL072_25945 PF00140 Sigma-70 factor, region 1.2 AL072_25945 PF04545 Sigma-70, region 4 AL072_25950 PF00849 RNA pseudouridylate synthase AL072_25960 PF01212 Beta-eliminating lyase AL072_25980 PF10672 S-adenosylmethionine-dependent methyltransferase AL072_25980 PF01170 Putative RNA methylase family UPF0020 AL072_25980 PF02926 THUMP domain AL072_25995 PF00672 HAMP domain AL072_25995 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain AL072_26010 PF00384 Molybdopterin oxidoreductase AL072_26010 PF01568 Molydopterin dinucleotide binding domain AL072_26010 PF04879 Molybdopterin oxidoreductase Fe4S4 domain AL072_26015 PF10589 NADH-ubiquinone oxidoreductase-F iron-sulfur binding region AL072_26015 PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit AL072_26015 PF00037 4Fe-4S binding domain AL072_26025 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AL072_26025 PF03466 LysR substrate binding domain AL072_26030 PF08450 SMP-30/Gluconolactonase/LRE-like region AL072_26035 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AL072_26035 PF03466 LysR substrate binding domain AL072_26045 PF00456 Transketolase, thiamine diphosphate binding domain AL072_26050 PF02780 Transketolase, C-terminal domain AL072_26050 PF02779 Transketolase, pyrimidine binding domain AL072_26055 PF04290 Tripartite ATP-independent periplasmic transporters, DctQ component AL072_26055 PF03480 Bacterial extracellular solute-binding protein, family 7 AL072_26060 PF03480 Bacterial extracellular solute-binding protein, family 7 AL072_26060 PF04290 Tripartite ATP-independent periplasmic transporters, DctQ component AL072_26065 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component AL072_26070 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase AL072_26070 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase AL072_26075 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain AL072_26075 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain AL072_26080 PF02779 Transketolase, pyrimidine binding domain AL072_26080 PF02780 Transketolase, C-terminal domain AL072_26080 PF00456 Transketolase, thiamine diphosphate binding domain AL072_26085 PF02913 FAD linked oxidases, C-terminal domain AL072_26085 PF01565 FAD binding domain AL072_26095 PF00005 ABC transporter AL072_26095 PF08402 TOBE domain AL072_26100 PF00528 Binding-protein-dependent transport system inner membrane component AL072_26105 PF00701 Dihydrodipicolinate synthetase family AL072_26115 PF01070 FMN-dependent dehydrogenase AL072_26125 PF03354 Phage Terminase AL072_26140 PF13737 Transposase DDE domain AL072_26150 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AL072_26150 PF00672 HAMP domain AL072_26150 PF00512 His Kinase A (phospho-acceptor) domain AL072_26155 PF00072 Response regulator receiver domain AL072_26155 PF00486 Transcriptional regulatory protein, C terminal AL072_26160 PF02321 Outer membrane efflux protein AL072_26170 PF00005 ABC transporter AL072_26185 PF00893 Small Multidrug Resistance protein AL072_26210 PF13737 Transposase DDE domain AL072_26245 PF00437 Type II/IV secretion system protein AL072_26260 PF13629 Pilus formation protein N terminal region AL072_26260 PF04972 BON domain AL072_26260 PF00263 Bacterial type II and III secretion system protein AL072_26290 PF13614 AAA domain AL072_26295 PF02909 Tetracyclin repressor-like, C-terminal domain AL072_26295 PF00440 Bacterial regulatory proteins, tetR family AL072_26305 PF00005 ABC transporter AL072_26310 PF02653 Branched-chain amino acid transport system / permease component AL072_26315 PF13407 Periplasmic binding protein domain AL072_26325 PF00370 FGGY family of carbohydrate kinases, N-terminal domain AL072_26325 PF02782 FGGY family of carbohydrate kinases, C-terminal domain AL072_26330 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family AL072_26330 PF00356 Bacterial regulatory proteins, lacI family AL072_26340 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AL072_26340 PF03459 TOBE domain AL072_26350 PF04264 YceI-like domain AL072_26370 PF00672 HAMP domain AL072_26370 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain AL072_26405 PF00113 Enolase, C-terminal TIM barrel domain AL072_26405 PF03952 Enolase, N-terminal domain AL072_26410 PF13660 Domain of unknown function (DUF4147) AL072_26410 PF05161 MOFRL family AL072_26415 PF13458 Periplasmic binding protein AL072_26420 PF02653 Branched-chain amino acid transport system / permease component AL072_26425 PF02653 Branched-chain amino acid transport system / permease component AL072_26425 PF11862 Domain of unknown function (DUF3382) AL072_26430 PF00005 ABC transporter AL072_26430 PF12399 Branched-chain amino acid ATP-binding cassette transporter AL072_26435 PF00005 ABC transporter AL072_26460 PF08402 TOBE domain AL072_26460 PF00005 ABC transporter AL072_26465 PF00528 Binding-protein-dependent transport system inner membrane component AL072_26500 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AL072_26500 PF05231 MASE1 AL072_26500 PF07730 Histidine kinase AL072_26540 PF04955 HupE / UreJ protein AL072_26545 PF01455 HupF/HypC family AL072_26550 PF01155 Hydrogenase/urease nickel incorporation, metallochaperone, hypA AL072_26555 PF02634 FdhD/NarQ family AL072_26560 PF01226 Formate/nitrite transporter AL072_26565 PF01750 Hydrogenase maturation protease AL072_26570 PF07450 Formate hydrogenlyase maturation protein HycH AL072_26575 PF01058 NADH ubiquinone oxidoreductase, 20 Kd subunit AL072_26580 PF12838 4Fe-4S dicluster domain AL072_26585 PF00329 Respiratory-chain NADH dehydrogenase, 30 Kd subunit AL072_26585 PF00346 Respiratory-chain NADH dehydrogenase, 49 Kd subunit AL072_26585 PF00374 Nickel-dependent hydrogenase AL072_26590 PF00361 Proton-conducting membrane transporter AL072_26590 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus AL072_26595 PF00420 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L AL072_26600 PF00361 Proton-conducting membrane transporter AL072_26600 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus AL072_26605 PF00146 NADH dehydrogenase AL072_26610 PF00361 Proton-conducting membrane transporter AL072_26615 PF12798 4Fe-4S binding domain AL072_26615 PF00037 4Fe-4S binding domain AL072_26620 PF12800 4Fe-4S binding domain AL072_26620 PF13247 4Fe-4S dicluster domain AL072_26625 PF01568 Molydopterin dinucleotide binding domain AL072_26625 PF00384 Molybdopterin oxidoreductase AL072_26625 PF04879 Molybdopterin oxidoreductase Fe4S4 domain AL072_26635 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AL072_26635 PF03466 LysR substrate binding domain AL072_26660 PF00571 CBS domain AL072_26675 PF00171 Aldehyde dehydrogenase family AL072_26685 PF02515 CoA-transferase family III AL072_26690 PF00202 Aminotransferase class-III AL072_26695 PF00106 short chain dehydrogenase AL072_26705 PF00528 Binding-protein-dependent transport system inner membrane component AL072_26710 PF00005 ABC transporter AL072_26715 PF04069 Substrate binding domain of ABC-type glycine betaine transport system AL072_26720 PF00155 Aminotransferase class I and II AL072_26720 PF00392 Bacterial regulatory proteins, gntR family AL072_26725 PF03334 Na+/H+ antiporter subunit AL072_26730 PF04066 Multiple resistance and pH regulation protein F (MrpF / PhaF) AL072_26735 PF01899 Na+/H+ ion antiporter subunit AL072_26740 PF00361 Proton-conducting membrane transporter AL072_26745 PF00420 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L AL072_26750 PF00361 Proton-conducting membrane transporter AL072_26750 PF04039 Domain related to MnhB subunit of Na+/H+ antiporter AL072_26750 PF13244 Domain of unknown function (DUF4040) AL072_26750 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus AL072_26755 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 AL072_26765 PF00512 His Kinase A (phospho-acceptor) domain AL072_26765 PF00989 PAS fold AL072_26765 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AL072_26770 PF00072 Response regulator receiver domain AL072_26770 PF00196 Bacterial regulatory proteins, luxR family AL072_26775 PF00140 Sigma-70 factor, region 1.2 AL072_26775 PF04542 Sigma-70 region 2 AL072_26775 PF04545 Sigma-70, region 4 AL072_26780 PF02423 Ornithine cyclodeaminase/mu-crystallin family AL072_26785 PF00491 Arginase family AL072_26795 PF00501 AMP-binding enzyme AL072_26795 PF13193 AMP-binding enzyme C-terminal domain AL072_26800 PF02770 Acyl-CoA dehydrogenase, middle domain AL072_26800 PF00441 Acyl-CoA dehydrogenase, C-terminal domain AL072_26800 PF02771 Acyl-CoA dehydrogenase, N-terminal domain AL072_26805 PF05721 Phytanoyl-CoA dioxygenase (PhyH) AL072_26810 PF08240 Alcohol dehydrogenase GroES-like domain AL072_26810 PF00107 Zinc-binding dehydrogenase AL072_26830 PF03466 LysR substrate binding domain AL072_26830 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AL072_26835 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain AL072_26835 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain AL072_26840 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain AL072_26840 PF13378 Enolase C-terminal domain-like AL072_26845 PF00465 Iron-containing alcohol dehydrogenase AL072_26850 PF03480 Bacterial extracellular solute-binding protein, family 7 AL072_26850 PF04290 Tripartite ATP-independent periplasmic transporters, DctQ component AL072_26855 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component AL072_26860 PF07690 Major Facilitator Superfamily AL072_26875 PF00155 Aminotransferase class I and II AL072_26875 PF00392 Bacterial regulatory proteins, gntR family AL072_26880 PF00892 EamA-like transporter family AL072_26890 PF00465 Iron-containing alcohol dehydrogenase AL072_26890 PF00171 Aldehyde dehydrogenase family AL072_26895 PF05199 GMC oxidoreductase AL072_26895 PF00732 GMC oxidoreductase AL072_26910 PF00034 Cytochrome c AL072_26915 PF02332 Methane/Phenol/Toluene Hydroxylase AL072_26920 PF00970 Oxidoreductase FAD-binding domain AL072_26920 PF00111 2Fe-2S iron-sulfur cluster binding domain AL072_26920 PF00175 Oxidoreductase NAD-binding domain AL072_26925 PF02332 Methane/Phenol/Toluene Hydroxylase AL072_26930 PF02406 MmoB/DmpM family AL072_26935 PF00118 TCP-1/cpn60 chaperonin family AL072_26940 PF02954 Bacterial regulatory protein, Fis family AL072_26940 PF00158 Sigma-54 interaction domain AL072_26940 PF13426 PAS domain AL072_26995 PF13360 PQQ-like domain AL072_27000 PF00005 ABC transporter AL072_27005 PF00005 ABC transporter AL072_27015 PF08443 RimK-like ATP-grasp domain AL072_27015 PF18030 RimK PreATP-grasp domain AL072_27025 PF08714 Formaldehyde-activating enzyme (Fae) AL072_27050 PF02741 FTR, proximal lobe AL072_27050 PF01913 Formylmethanofuran-tetrahydromethanopterin formyltransferase AL072_27055 PF07969 Amidohydrolase family AL072_27070 PF09176 Methylene-tetrahydromethanopterin dehydrogenase, N-terminal AL072_27075 PF02289 Cyclohydrolase (MCH) AL072_27100 PF00809 Pterin binding enzyme AL072_27115 PF00294 pfkB family carbohydrate kinase AL072_27125 PF02653 Branched-chain amino acid transport system / permease component AL072_27130 PF02653 Branched-chain amino acid transport system / permease component AL072_27135 PF00005 ABC transporter AL072_27140 PF13407 Periplasmic binding protein domain AL072_27145 PF01791 DeoC/LacD family aldolase AL072_27150 PF00455 DeoR C terminal sensor domain AL072_27150 PF08220 DeoR-like helix-turn-helix domain AL072_27155 PF00378 Enoyl-CoA hydratase/isomerase AL072_27160 PF02803 Thiolase, C-terminal domain AL072_27160 PF00108 Thiolase, N-terminal domain AL072_27165 PF03819 MazG nucleotide pyrophosphohydrolase domain AL072_27170 PF00872 Transposase, Mutator family AL072_27175 PF07690 Major Facilitator Superfamily AL072_27180 PF03466 LysR substrate binding domain AL072_27180 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AL072_27185 PF01226 Formate/nitrite transporter AL072_27190 PF03952 Enolase, N-terminal domain AL072_27190 PF00113 Enolase, C-terminal TIM barrel domain AL072_27195 PF01515 Phosphate acetyl/butaryl transferase AL072_27200 PF00871 Acetokinase family AL072_27205 PF00892 EamA-like transporter family AL072_27215 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain AL072_27215 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain AL072_27230 PF00378 Enoyl-CoA hydratase/isomerase AL072_27235 PF02798 Glutathione S-transferase, N-terminal domain AL072_27240 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AL072_27240 PF03466 LysR substrate binding domain AL072_27255 PF03466 LysR substrate binding domain AL072_27255 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AL072_27260 PF00106 short chain dehydrogenase AL072_27265 PF03466 LysR substrate binding domain AL072_27265 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AL072_27295 PF01979 Amidohydrolase family AL072_27305 PF01979 Amidohydrolase family AL072_27310 PF00005 ABC transporter AL072_27315 PF00528 Binding-protein-dependent transport system inner membrane component AL072_27325 PF00392 Bacterial regulatory proteins, gntR family AL072_27325 PF07729 FCD domain AL072_27335 PF00528 Binding-protein-dependent transport system inner membrane component AL072_27340 PF00528 Binding-protein-dependent transport system inner membrane component AL072_27345 PF08402 TOBE domain AL072_27345 PF00005 ABC transporter AL072_27355 PF03466 LysR substrate binding domain AL072_27355 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AL072_27360 PF01266 FAD dependent oxidoreductase AL072_27370 PF04324 BFD-like [2Fe-2S] binding domain AL072_27370 PF07992 Pyridine nucleotide-disulphide oxidoreductase AL072_27375 PF01593 Flavin containing amine oxidoreductase AL072_27380 PF01042 Endoribonuclease L-PSP AL072_27385 PF00497 Bacterial extracellular solute-binding proteins, family 3 AL072_27390 PF01042 Endoribonuclease L-PSP AL072_27400 PF13533 Biotin-lipoyl like AL072_27405 PF00497 Bacterial extracellular solute-binding proteins, family 3 AL072_27410 PF00528 Binding-protein-dependent transport system inner membrane component AL072_27415 PF00005 ABC transporter AL072_27420 PF13545 Crp-like helix-turn-helix domain AL072_27420 PF00027 Cyclic nucleotide-binding domain AL072_27425 PF00072 Response regulator receiver domain AL072_27425 PF00196 Bacterial regulatory proteins, luxR family AL072_27430 PF00196 Bacterial regulatory proteins, luxR family AL072_27430 PF00072 Response regulator receiver domain AL072_27435 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AL072_27435 PF00989 PAS fold AL072_27435 PF00512 His Kinase A (phospho-acceptor) domain AL072_27440 PF00672 HAMP domain AL072_27440 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain AL072_27445 PF13419 Haloacid dehalogenase-like hydrolase AL072_27450 PF00171 Aldehyde dehydrogenase family AL072_27455 PF00384 Molybdopterin oxidoreductase AL072_27475 PF00106 short chain dehydrogenase AL072_27480 PF01557 Fumarylacetoacetate (FAA) hydrolase family AL072_27485 PF07729 FCD domain AL072_27485 PF00392 Bacterial regulatory proteins, gntR family AL072_27510 PF00005 ABC transporter AL072_27510 PF03412 Peptidase C39 family AL072_27510 PF00664 ABC transporter transmembrane region AL072_27515 PF00535 Glycosyl transferase family 2 AL072_27540 PF08241 Methyltransferase domain AL072_27595 PF07690 Major Facilitator Superfamily AL072_27600 PF00561 alpha/beta hydrolase fold AL072_27605 PF00106 short chain dehydrogenase AL072_27610 PF01965 DJ-1/PfpI family AL072_27610 PF12833 Helix-turn-helix domain AL072_27615 PF00108 Thiolase, N-terminal domain AL072_27615 PF02803 Thiolase, C-terminal domain AL072_27620 PF02627 Carboxymuconolactone decarboxylase family AL072_27640 PF00300 Histidine phosphatase superfamily (branch 1) AL072_27655 PF02771 Acyl-CoA dehydrogenase, N-terminal domain AL072_27655 PF02770 Acyl-CoA dehydrogenase, middle domain AL072_27655 PF00441 Acyl-CoA dehydrogenase, C-terminal domain AL072_27670 PF00501 AMP-binding enzyme AL072_27670 PF13193 AMP-binding enzyme C-terminal domain AL072_27675 PF00561 alpha/beta hydrolase fold AL072_27680 PF01614 Bacterial transcriptional regulator AL072_27680 PF09339 IclR helix-turn-helix domain AL072_27685 PF00753 Metallo-beta-lactamase superfamily AL072_27690 PF01565 FAD binding domain AL072_27690 PF02913 FAD linked oxidases, C-terminal domain AL072_27695 PF00330 Aconitase family (aconitate hydratase) AL072_27700 PF00694 Aconitase C-terminal domain AL072_27715 PF02653 Branched-chain amino acid transport system / permease component AL072_27720 PF11862 Domain of unknown function (DUF3382) AL072_27720 PF02653 Branched-chain amino acid transport system / permease component AL072_27725 PF00005 ABC transporter AL072_27725 PF12399 Branched-chain amino acid ATP-binding cassette transporter AL072_27730 PF00005 ABC transporter AL072_27735 PF02913 FAD linked oxidases, C-terminal domain AL072_27735 PF01565 FAD binding domain AL072_27750 PF02615 Malate/L-lactate dehydrogenase AL072_27755 PF17200 Single Cache domain 2 AL072_27755 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain AL072_27755 PF00672 HAMP domain AL072_27760 PF00300 Histidine phosphatase superfamily (branch 1) AL072_27765 PF00561 alpha/beta hydrolase fold AL072_27780 PF07670 Nucleoside recognition AL072_27780 PF04023 FeoA domain AL072_27780 PF07664 Ferrous iron transport protein B C terminus AL072_27780 PF17910 FeoB cytosolic helical domain AL072_27780 PF02421 Ferrous iron transport protein B AL072_27800 PF05231 MASE1 AL072_27800 PF07730 Histidine kinase AL072_27800 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AL072_27805 PF00072 Response regulator receiver domain AL072_27805 PF00196 Bacterial regulatory proteins, luxR family AL072_27810 PF02742 Iron dependent repressor, metal binding and dimerisation domain AL072_27810 PF01325 Iron dependent repressor, N-terminal DNA binding domain AL072_27815 PF01566 Natural resistance-associated macrophage protein AL072_27825 PF01494 FAD binding domain AL072_27830 PF00196 Bacterial regulatory proteins, luxR family AL072_27830 PF00072 Response regulator receiver domain AL072_27835 PF00072 Response regulator receiver domain AL072_27835 PF00196 Bacterial regulatory proteins, luxR family AL072_27845 PF03992 Antibiotic biosynthesis monooxygenase AL072_27850 PF00440 Bacterial regulatory proteins, tetR family AL072_27850 PF17932 Tetracyclin repressor-like, C-terminal domain AL072_27865 PF02311 AraC-like ligand binding domain AL072_27865 PF12833 Helix-turn-helix domain AL072_27870 PF00561 alpha/beta hydrolase fold AL072_27875 PF07859 alpha/beta hydrolase fold AL072_27885 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain AL072_27885 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain AL072_27910 PF03601 Conserved hypothetical protein 698 AL072_27945 PF03960 ArsC family AL072_27950 PF01758 Sodium Bile acid symporter family AL072_27955 PF03358 NADPH-dependent FMN reductase AL072_27960 PF02954 Bacterial regulatory protein, Fis family AL072_27960 PF13426 PAS domain AL072_27960 PF00158 Sigma-54 interaction domain AL072_27970 PF14535 AMP-binding enzyme C-terminal domain AL072_27970 PF00501 AMP-binding enzyme AL072_27975 PF00378 Enoyl-CoA hydratase/isomerase AL072_27985 PF13458 Periplasmic binding protein AL072_27990 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AL072_27990 PF00512 His Kinase A (phospho-acceptor) domain AL072_27990 PF00989 PAS fold AL072_27995 PF00196 Bacterial regulatory proteins, luxR family AL072_27995 PF00072 Response regulator receiver domain AL072_28000 PF00174 Oxidoreductase molybdopterin binding domain AL072_28005 PF00034 Cytochrome c AL072_28045 PF00753 Metallo-beta-lactamase superfamily AL072_28050 PF03050 Transposase IS66 family AL072_28050 PF13007 Transposase C of IS166 homeodomain AL072_28050 PF13817 IS66 C-terminal element AL072_28050 PF13005 zinc-finger binding domain of transposase IS66 AL072_28055 PF05717 IS66 Orf2 like protein AL072_28095 PF01037 Lrp/AsnC ligand binding domain AL072_28100 PF07690 Major Facilitator Superfamily AL072_28110 PF00550 Phosphopantetheine attachment site AL072_28110 PF13193 AMP-binding enzyme C-terminal domain AL072_28110 PF00501 AMP-binding enzyme AL072_28110 PF00668 Condensation domain AL072_28115 PF05683 Fumarase C-terminus AL072_28115 PF05681 Fumarate hydratase (Fumerase) AL072_28130 PF00849 RNA pseudouridylate synthase AL072_28135 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AL072_28135 PF00512 His Kinase A (phospho-acceptor) domain AL072_28135 PF09456 RcsC Alpha-Beta-Loop (ABL) AL072_28135 PF00072 Response regulator receiver domain AL072_28140 PF02678 Pirin AL072_28140 PF17954 Quercetinase C-terminal cupin domain AL072_28155 PF00072 Response regulator receiver domain AL072_28160 PF01584 CheW-like domain AL072_28160 PF09078 CheY binding AL072_28160 PF01627 Hpt domain AL072_28160 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AL072_28160 PF02895 Signal transducing histidine kinase, homodimeric domain AL072_28165 PF01584 CheW-like domain AL072_28170 PF02203 Tar ligand binding domain homologue AL072_28170 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain AL072_28170 PF00672 HAMP domain AL072_28180 PF01739 CheR methyltransferase, SAM binding domain AL072_28180 PF03705 CheR methyltransferase, all-alpha domain AL072_28185 PF00072 Response regulator receiver domain AL072_28185 PF01339 CheB methylesterase AL072_28195 PF05128 Domain of unknown function (DUF697) AL072_28200 PF04317 YcjX-like family, DUF463 AL072_28210 PF00072 Response regulator receiver domain AL072_28210 PF00486 Transcriptional regulatory protein, C terminal AL072_28225 PF00005 ABC transporter AL072_28240 PF02653 Branched-chain amino acid transport system / permease component AL072_28245 PF00501 AMP-binding enzyme AL072_28250 PF12399 Branched-chain amino acid ATP-binding cassette transporter AL072_28250 PF00005 ABC transporter AL072_28255 PF13193 AMP-binding enzyme C-terminal domain AL072_28255 PF00501 AMP-binding enzyme AL072_28265 PF02311 AraC-like ligand binding domain AL072_28265 PF12833 Helix-turn-helix domain AL072_28275 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain AL072_28275 PF08447 PAS fold AL072_28280 PF01037 Lrp/AsnC ligand binding domain AL072_28285 PF13755 Sensor N-terminal transmembrane domain AL072_28285 PF13756 Stimulus-sensing domain AL072_28285 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AL072_28285 PF00672 HAMP domain AL072_28285 PF00512 His Kinase A (phospho-acceptor) domain AL072_28290 PF00072 Response regulator receiver domain AL072_28290 PF00486 Transcriptional regulatory protein, C terminal AL072_28310 PF00682 HMGL-like AL072_28315 PF00289 Biotin carboxylase, N-terminal domain AL072_28315 PF02785 Biotin carboxylase C-terminal domain AL072_28315 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain AL072_28315 PF00364 Biotin-requiring enzyme AL072_28320 PF00378 Enoyl-CoA hydratase/isomerase AL072_28325 PF01039 Carboxyl transferase domain AL072_28330 PF00441 Acyl-CoA dehydrogenase, C-terminal domain AL072_28330 PF02770 Acyl-CoA dehydrogenase, middle domain AL072_28330 PF02771 Acyl-CoA dehydrogenase, N-terminal domain AL072_28335 PF00108 Thiolase, N-terminal domain AL072_28335 PF02803 Thiolase, C-terminal domain AL072_28340 PF02770 Acyl-CoA dehydrogenase, middle domain AL072_28340 PF02771 Acyl-CoA dehydrogenase, N-terminal domain AL072_28340 PF00441 Acyl-CoA dehydrogenase, C-terminal domain AL072_28345 PF13593 SBF-like CPA transporter family (DUF4137) AL072_28355 PF02634 FdhD/NarQ family AL072_28365 PF02107 Flagellar L-ring protein AL072_28375 PF03963 Flagellar hook capping protein - N-terminal region AL072_28375 PF13860 FlgD Ig-like domain AL072_28375 PF13861 FlgD Tudor-like domain AL072_28395 PF02154 Flagellar motor switch protein FliM AL072_28395 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term AL072_28405 PF01514 Secretory protein of YscJ/FliF family AL072_28405 PF08345 Flagellar M-ring protein C-terminal AL072_28415 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term AL072_28420 PF00813 FliP family AL072_28430 PF14842 FliG N-terminal domain AL072_28430 PF14841 FliG middle domain AL072_28430 PF01706 FliG C-terminal domain AL072_28445 PF00072 Response regulator receiver domain AL072_28445 PF00486 Transcriptional regulatory protein, C terminal AL072_28450 PF00700 Bacterial flagellin C-terminal helical region AL072_28450 PF00669 Bacterial flagellin N-terminal helical region AL072_28460 PF07378 Flagellar protein FlbT AL072_28490 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain AL072_28490 PF02874 ATP synthase alpha/beta family, beta-barrel domain AL072_28490 PF18269 T3SS EscN ATPase C-terminal domain AL072_28500 PF06429 Flagellar basal body rod FlgEFG protein C-terminal AL072_28500 PF00460 Flagella basal body rod protein AL072_28505 PF02049 Flagellar hook-basal body complex protein FliE AL072_28510 PF01313 Bacterial export proteins, family 3 AL072_28530 PF00771 FHIPEP family AL072_28540 PF01312 FlhB HrpN YscU SpaS Family AL072_28545 PF02254 TrkA-N domain AL072_28545 PF02080 TrkA-C domain AL072_28550 PF02386 Cation transport protein AL072_28575 PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase AL072_28580 PF00111 2Fe-2S iron-sulfur cluster binding domain AL072_28580 PF01799 [2Fe-2S] binding domain AL072_28585 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AL072_28585 PF03466 LysR substrate binding domain AL072_28600 PF00005 ABC transporter AL072_28605 PF00528 Binding-protein-dependent transport system inner membrane component AL072_28610 PF09084 NMT1/THI5 like AL072_28615 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain AL072_28615 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain AL072_28620 PF08543 Phosphomethylpyrimidine kinase AL072_28625 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II AL072_28625 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I AL072_28625 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain AL072_28625 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III AL072_28630 PF00809 Pterin binding enzyme AL072_28675 PF00156 Phosphoribosyl transferase domain AL072_28680 PF02405 Permease MlaE AL072_28685 PF00005 ABC transporter AL072_28690 PF03886 ABC-type transport auxiliary lipoprotein component AL072_28690 PF02470 MlaD protein AL072_28710 PF00989 PAS fold AL072_28710 PF00512 His Kinase A (phospho-acceptor) domain AL072_28710 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AL072_28720 PF01979 Amidohydrolase family AL072_28720 PF13382 Adenine deaminase C-terminal domain AL072_28725 PF08530 X-Pro dipeptidyl-peptidase C-terminal non-catalytic domain AL072_28725 PF02129 X-Pro dipeptidyl-peptidase (S15 family) AL072_28735 PF01814 Hemerythrin HHE cation binding domain AL072_28750 PF00994 Probable molybdopterin binding domain AL072_28755 PF01464 Transglycosylase SLT domain AL072_28755 PF14718 Soluble lytic murein transglycosylase L domain AL072_28760 PF03167 Uracil DNA glycosylase superfamily AL072_28770 PF13717 zinc-ribbon domain AL072_28775 PF18024 Helix-turn-helix domain AL072_28775 PF00158 Sigma-54 interaction domain AL072_28780 PF01266 FAD dependent oxidoreductase AL072_28790 PF02589 LUD domain AL072_28795 PF11870 Domain of unknown function (DUF3390) AL072_28795 PF13183 4Fe-4S dicluster domain AL072_28795 PF02589 LUD domain AL072_28800 PF02754 Cysteine-rich domain AL072_28810 PF07729 FCD domain AL072_28810 PF00392 Bacterial regulatory proteins, gntR family AL072_28820 PF02954 Bacterial regulatory protein, Fis family AL072_28820 PF00072 Response regulator receiver domain AL072_28820 PF00158 Sigma-54 interaction domain AL072_28825 PF01627 Hpt domain AL072_28825 PF00512 His Kinase A (phospho-acceptor) domain AL072_28825 PF00072 Response regulator receiver domain AL072_28825 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AL072_28825 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) AL072_28825 PF00672 HAMP domain AL072_28835 PF00285 Citrate synthase, C-terminal domain AL072_28845 PF00196 Bacterial regulatory proteins, luxR family AL072_28845 PF00072 Response regulator receiver domain AL072_28850 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AL072_28850 PF00072 Response regulator receiver domain AL072_28850 PF09456 RcsC Alpha-Beta-Loop (ABL) AL072_28850 PF00512 His Kinase A (phospho-acceptor) domain AL072_28855 PF07690 Major Facilitator Superfamily AL072_28860 PF00497 Bacterial extracellular solute-binding proteins, family 3 AL072_28865 PF00672 HAMP domain AL072_28865 PF00072 Response regulator receiver domain AL072_28865 PF01627 Hpt domain AL072_28865 PF00512 His Kinase A (phospho-acceptor) domain AL072_28865 PF17149 Periplasmic sensor domain found in signal transduction proteins AL072_28865 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AL072_28875 PF01418 Helix-turn-helix domain, rpiR family AL072_28875 PF01380 SIS domain AL072_28880 PF01557 Fumarylacetoacetate (FAA) hydrolase family AL072_28885 PF12729 Four helix bundle sensory module for signal transduction AL072_28885 PF00672 HAMP domain AL072_28885 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain AL072_28890 PF00175 Oxidoreductase NAD-binding domain AL072_28890 PF00042 Globin AL072_28890 PF00970 Oxidoreductase FAD-binding domain AL072_28895 PF00158 Sigma-54 interaction domain AL072_28895 PF02954 Bacterial regulatory protein, Fis family AL072_28905 PF04290 Tripartite ATP-independent periplasmic transporters, DctQ component AL072_28905 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component AL072_28910 PF04290 Tripartite ATP-independent periplasmic transporters, DctQ component AL072_28915 PF00672 HAMP domain AL072_28915 PF00512 His Kinase A (phospho-acceptor) domain AL072_28915 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AL072_28925 PF02954 Bacterial regulatory protein, Fis family AL072_28925 PF00989 PAS fold AL072_28925 PF00158 Sigma-54 interaction domain AL072_28930 PF03786 D-mannonate dehydratase (UxuA) AL072_28935 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component AL072_28945 PF03480 Bacterial extracellular solute-binding protein, family 7 AL072_28950 PF00107 Zinc-binding dehydrogenase AL072_28950 PF08240 Alcohol dehydrogenase GroES-like domain AL072_28955 PF01232 Mannitol dehydrogenase Rossmann domain AL072_28955 PF08125 Mannitol dehydrogenase C-terminal domain AL072_28960 PF07729 FCD domain AL072_28960 PF00392 Bacterial regulatory proteins, gntR family AL072_28965 PF00311 Phosphoenolpyruvate carboxylase AL072_28995 PF00072 Response regulator receiver domain AL072_29010 PF13426 PAS domain AL072_29010 PF07568 Histidine kinase AL072_29010 PF13581 Histidine kinase-like ATPase domain AL072_29025 PF04055 Radical SAM superfamily AL072_29025 PF08497 Radical SAM N-terminal AL072_29025 PF11842 Domain of unknown function (DUF3362) AL072_29030 PF07690 Major Facilitator Superfamily AL072_29035 PF06736 Protein of unknown function (DUF1211) AL072_29050 PF00005 ABC transporter AL072_29055 PF00528 Binding-protein-dependent transport system inner membrane component AL072_29060 PF00528 Binding-protein-dependent transport system inner membrane component AL072_29065 PF12849 PBP superfamily domain AL072_29075 PF13417 Glutathione S-transferase, N-terminal domain AL072_29075 PF00043 Glutathione S-transferase, C-terminal domain AL072_29080 PF16123 Hydroxyacylglutathione hydrolase C-terminus AL072_29080 PF00753 Metallo-beta-lactamase superfamily AL072_29085 PF01209 ubiE/COQ5 methyltransferase family AL072_29095 PF12826 Helix-hairpin-helix motif AL072_29095 PF08459 UvrC Helix-hairpin-helix N-terminal AL072_29095 PF01541 GIY-YIG catalytic domain AL072_29095 PF02151 UvrB/uvrC motif AL072_29120 PF01546 Peptidase family M20/M25/M40 AL072_29120 PF07687 Peptidase dimerisation domain AL072_29125 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AL072_29125 PF03466 LysR substrate binding domain AL072_29130 PF00491 Arginase family AL072_29140 PF00528 Binding-protein-dependent transport system inner membrane component AL072_29145 PF00005 ABC transporter AL072_29150 PF03707 Bacterial signalling protein N terminal repeat AL072_29150 PF00990 Diguanylate cyclase, GGDEF domain AL072_29150 PF00563 EAL domain AL072_29245 PF10124 Mu-like prophage major head subunit gpT AL072_29270 PF03237 Terminase-like family AL072_29275 PF11985 Protein of unknown function (DUF3486) AL072_29285 PF08461 Ribonuclease R winged-helix domain AL072_29415 PF01544 CorA-like Mg2+ transporter protein AL072_29425 PF08544 GHMP kinases C terminal AL072_29425 PF00288 GHMP kinases N terminal domain AL072_29440 PF07690 Major Facilitator Superfamily AL072_29455 PF01641 SelR domain AL072_29470 PF00072 Response regulator receiver domain AL072_29470 PF00486 Transcriptional regulatory protein, C terminal AL072_29475 PF00392 Bacterial regulatory proteins, gntR family AL072_29475 PF00155 Aminotransferase class I and II AL072_29495 PF02321 Outer membrane efflux protein AL072_29515 PF01761 3-dehydroquinate synthase AL072_29535 PF00196 Bacterial regulatory proteins, luxR family AL072_29535 PF00072 Response regulator receiver domain AL072_29540 PF00691 OmpA family AL072_29560 PF13458 Periplasmic binding protein AL072_29570 PF00005 ABC transporter AL072_29575 PF12399 Branched-chain amino acid ATP-binding cassette transporter AL072_29575 PF00005 ABC transporter AL072_29580 PF11862 Domain of unknown function (DUF3382) AL072_29580 PF02653 Branched-chain amino acid transport system / permease component AL072_29585 PF02653 Branched-chain amino acid transport system / permease component AL072_29595 PF00480 ROK family AL072_29615 PF00535 Glycosyl transferase family 2 AL072_29620 PF13180 PDZ domain AL072_29635 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AL072_29635 PF00512 His Kinase A (phospho-acceptor) domain AL072_29635 PF00497 Bacterial extracellular solute-binding proteins, family 3 AL072_29640 PF09335 SNARE associated Golgi protein AL072_29645 PF11614 IG-like fold at C-terminal of FixG, putative oxidoreductase AL072_29645 PF13746 4Fe-4S dicluster domain AL072_29645 PF12801 4Fe-4S binding domain AL072_29665 PF03150 Di-haem cytochrome c peroxidase AL072_29675 PF08241 Methyltransferase domain AL072_29680 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AL072_29680 PF00512 His Kinase A (phospho-acceptor) domain AL072_29685 PF02954 Bacterial regulatory protein, Fis family AL072_29685 PF00158 Sigma-54 interaction domain AL072_29685 PF00072 Response regulator receiver domain AL072_29695 PF17200 Single Cache domain 2 AL072_29695 PF00672 HAMP domain AL072_29695 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain AL072_29700 PF13193 AMP-binding enzyme C-terminal domain AL072_29700 PF00501 AMP-binding enzyme AL072_29705 PF02782 FGGY family of carbohydrate kinases, C-terminal domain AL072_29705 PF00370 FGGY family of carbohydrate kinases, N-terminal domain AL072_29725 PF00528 Binding-protein-dependent transport system inner membrane component AL072_29730 PF00005 ABC transporter AL072_29730 PF17912 MalK OB fold domain AL072_29735 PF00005 ABC transporter AL072_29735 PF08402 TOBE domain AL072_29740 PF16901 C-terminal domain of alpha-glycerophosphate oxidase AL072_29740 PF01266 FAD dependent oxidoreductase AL072_29745 PF08220 DeoR-like helix-turn-helix domain AL072_29745 PF00455 DeoR C terminal sensor domain AL072_29750 PF00478 IMP dehydrogenase / GMP reductase domain AL072_29760 PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase AL072_29760 PF00034 Cytochrome c AL072_29760 PF13442 Cytochrome C oxidase, cbb3-type, subunit III AL072_29765 PF01322 Cytochrome C' AL072_29770 PF03641 Possible lysine decarboxylase AL072_29775 PF00772 DnaB-like helicase N terminal domain AL072_29775 PF03796 DnaB-like helicase C terminal domain AL072_29780 PF00842 Alanine racemase, C-terminal domain AL072_29780 PF01168 Alanine racemase, N-terminal domain AL072_29785 PF02405 Permease MlaE AL072_29790 PF00005 ABC transporter AL072_29795 PF00730 HhH-GPD superfamily base excision DNA repair protein AL072_29795 PF00633 Helix-hairpin-helix motif AL072_29795 PF10576 Iron-sulfur binding domain of endonuclease III AL072_29805 PF00959 Phage lysozyme AL072_29900 PF01343 Peptidase family S49 AL072_29910 PF03354 Phage Terminase AL072_30030 PF09003 Bacteriophage lambda integrase, Arm DNA-binding domain AL072_30030 PF00589 Phage integrase family AL072_30050 PF02525 Flavodoxin-like fold AL072_30055 PF00232 Glycosyl hydrolase family 1 AL072_30065 PF01923 Cobalamin adenosyltransferase AL072_30070 PF01012 Electron transfer flavoprotein domain AL072_30075 PF01012 Electron transfer flavoprotein domain AL072_30075 PF00766 Electron transfer flavoprotein FAD-binding domain AL072_30080 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain AL072_30080 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain AL072_30085 PF18327 Proline utilization A proline dehydrogenase N-terminal domain AL072_30085 PF14850 DNA-binding domain of Proline dehydrogenase AL072_30085 PF01619 Proline dehydrogenase AL072_30085 PF00171 Aldehyde dehydrogenase family AL072_30095 PF00561 alpha/beta hydrolase fold AL072_30105 PF02056 Family 4 glycosyl hydrolase AL072_30105 PF11975 Family 4 glycosyl hydrolase C-terminal domain AL072_30110 PF00356 Bacterial regulatory proteins, lacI family AL072_30110 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family AL072_30115 PF04952 Succinylglutamate desuccinylase / Aspartoacylase family AL072_30120 PF01042 Endoribonuclease L-PSP AL072_30125 PF00497 Bacterial extracellular solute-binding proteins, family 3 AL072_30130 PF00005 ABC transporter AL072_30135 PF00528 Binding-protein-dependent transport system inner membrane component AL072_30140 PF00528 Binding-protein-dependent transport system inner membrane component AL072_30155 PF00368 Hydroxymethylglutaryl-coenzyme A reductase AL072_30160 PF00392 Bacterial regulatory proteins, gntR family AL072_30160 PF00155 Aminotransferase class I and II AL072_30165 PF00232 Glycosyl hydrolase family 1 AL072_30170 PF06472 ABC transporter transmembrane region 2 AL072_30170 PF00005 ABC transporter AL072_30175 PF01011 PQQ enzyme repeat AL072_30195 PF01546 Peptidase family M20/M25/M40 AL072_30195 PF07687 Peptidase dimerisation domain AL072_30200 PF01546 Peptidase family M20/M25/M40 AL072_30200 PF07687 Peptidase dimerisation domain AL072_30205 PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain AL072_30205 PF02805 Metal binding domain of Ada AL072_30205 PF12833 Helix-turn-helix domain AL072_30205 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain AL072_30210 PF09859 Oxygenase, catalysing oxidative methylation of damaged DNA AL072_30215 PF13532 2OG-Fe(II) oxygenase superfamily AL072_30245 PF00550 Phosphopantetheine attachment site AL072_30250 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain AL072_30250 PF00672 HAMP domain AL072_30250 PF16591 Helical bimodular sensor domain AL072_30260 PF17770 Ribonuclease J C-terminal domain AL072_30260 PF07521 Zn-dependent metallo-hydrolase RNA specificity domain AL072_30260 PF12706 Beta-lactamase superfamily domain AL072_30270 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain AL072_30270 PF00672 HAMP domain AL072_30270 PF17200 Single Cache domain 2 AL072_30280 PF00596 Class II Aldolase and Adducin N-terminal domain AL072_30285 PF08546 Ketopantoate reductase PanE/ApbA C terminal AL072_30285 PF02558 Ketopantoate reductase PanE/ApbA AL072_30290 PF00005 ABC transporter AL072_30295 PF00005 ABC transporter AL072_30295 PF12399 Branched-chain amino acid ATP-binding cassette transporter AL072_30310 PF01425 Amidase AL072_30315 PF02771 Acyl-CoA dehydrogenase, N-terminal domain AL072_30315 PF08028 Acyl-CoA dehydrogenase, C-terminal domain AL072_30330 PF00355 Rieske [2Fe-2S] domain AL072_30330 PF00848 Ring hydroxylating alpha subunit (catalytic domain) AL072_30345 PF00175 Oxidoreductase NAD-binding domain AL072_30345 PF00111 2Fe-2S iron-sulfur cluster binding domain AL072_30350 PF01613 Flavin reductase like domain AL072_30360 PF00873 AcrB/AcrD/AcrF family AL072_30365 PF00529 HlyD membrane-fusion protein of T1SS AL072_30365 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion AL072_30380 PF17922 Tetracyclin repressor-like, C-terminal domain AL072_30380 PF00440 Bacterial regulatory proteins, tetR family AL072_30385 PF07690 Major Facilitator Superfamily AL072_30390 PF00528 Binding-protein-dependent transport system inner membrane component AL072_30395 PF00528 Binding-protein-dependent transport system inner membrane component AL072_30400 PF00497 Bacterial extracellular solute-binding proteins, family 3 AL072_30405 PF00005 ABC transporter AL072_30410 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain AL072_30410 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain AL072_30415 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family AL072_30415 PF00356 Bacterial regulatory proteins, lacI family AL072_30425 PF09278 MerR, DNA binding AL072_30425 PF00376 MerR family regulatory protein AL072_30445 PF13614 AAA domain AL072_30450 PF02195 ParB-like nuclease domain AL072_30450 PF17762 HTH domain found in ParB protein AL072_30455 PF00171 Aldehyde dehydrogenase family AL072_30460 PF03466 LysR substrate binding domain AL072_30460 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AL072_30465 PF13193 AMP-binding enzyme C-terminal domain AL072_30465 PF00501 AMP-binding enzyme AL072_30470 PF00457 Glycosyl hydrolases family 11 AL072_30470 PF01522 Polysaccharide deacetylase AL072_30475 PF07694 5TMR of 5TMR-LYT AL072_30475 PF06580 Histidine kinase AL072_30480 PF04397 LytTr DNA-binding domain AL072_30480 PF00072 Response regulator receiver domain AL072_30485 PF01177 Asp/Glu/Hydantoin racemase AL072_30490 PF03631 Virulence factor BrkB AL072_30505 PF13722 5TM C-terminal transporter carbon starvation CstA AL072_30505 PF02554 Carbon starvation protein CstA AL072_30515 PF03466 LysR substrate binding domain AL072_30515 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AL072_30520 PF03600 Citrate transporter AL072_30540 PF00512 His Kinase A (phospho-acceptor) domain AL072_30540 PF08521 Two-component sensor kinase N-terminal AL072_30540 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AL072_30545 PF00072 Response regulator receiver domain AL072_30545 PF00486 Transcriptional regulatory protein, C terminal AL072_30555 PF03741 Integral membrane protein TerC family AL072_30560 PF01970 Tripartite tricarboxylate transporter TctA family AL072_30585 PF07885 Ion channel AL072_30585 PF02254 TrkA-N domain AL072_30590 PF00072 Response regulator receiver domain AL072_30595 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AL072_30595 PF00512 His Kinase A (phospho-acceptor) domain AL072_30605 PF03626 Prokaryotic Cytochrome C oxidase subunit IV AL072_30610 PF00510 Cytochrome c oxidase subunit III AL072_30615 PF00115 Cytochrome C and Quinol oxidase polypeptide I AL072_30620 PF06481 COX Aromatic Rich Motif AL072_30620 PF00116 Cytochrome C oxidase subunit II, periplasmic domain AL072_30625 PF07690 Major Facilitator Superfamily AL072_30625 PF00083 Sugar (and other) transporter AL072_30635 PF08240 Alcohol dehydrogenase GroES-like domain AL072_30635 PF00107 Zinc-binding dehydrogenase AL072_30635 PF13823 Alcohol dehydrogenase GroES-associated AL072_30660 PF00857 Isochorismatase family AL072_30670 PF00561 alpha/beta hydrolase fold AL072_30675 PF17645 Arylmalonate decarboxylase AL072_30680 PF01494 FAD binding domain AL072_30685 PF00005 ABC transporter AL072_30690 PF00005 ABC transporter AL072_30690 PF12399 Branched-chain amino acid ATP-binding cassette transporter AL072_30695 PF11862 Domain of unknown function (DUF3382) AL072_30695 PF02653 Branched-chain amino acid transport system / permease component AL072_30700 PF02653 Branched-chain amino acid transport system / permease component AL072_30705 PF13458 Periplasmic binding protein AL072_30710 PF04307 LexA-binding, inner membrane-associated putative hydrolase AL072_30715 PF00795 Carbon-nitrogen hydrolase AL072_30720 PF07728 AAA domain (dynein-related subfamily) AL072_30720 PF08406 CbbQ/NirQ/NorQ C-terminal AL072_30730 PF00072 Response regulator receiver domain AL072_30735 PF00512 His Kinase A (phospho-acceptor) domain AL072_30735 PF00072 Response regulator receiver domain AL072_30735 PF01627 Hpt domain AL072_30735 PF00989 PAS fold AL072_30735 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AL072_30735 PF18415 Histidine kinase receptor ArcB trans-membrane domain AL072_30755 PF00005 ABC transporter AL072_30755 PF12399 Branched-chain amino acid ATP-binding cassette transporter AL072_30760 PF00005 ABC transporter AL072_30770 PF03069 Acetamidase/Formamidase family AL072_30775 PF09723 Zinc ribbon domain AL072_30795 PF00132 Bacterial transferase hexapeptide (six repeats) AL072_30800 PF02515 CoA-transferase family III AL072_30805 PF00682 HMGL-like AL072_30810 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component AL072_30820 PF03480 Bacterial extracellular solute-binding protein, family 7 AL072_30825 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AL072_30825 PF03466 LysR substrate binding domain AL072_30850 PF00248 Aldo/keto reductase family AL072_30855 PF00135 Carboxylesterase family AL072_30880 PF12146 Serine aminopeptidase, S33 AL072_30890 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AL072_30890 PF03466 LysR substrate binding domain AL072_30895 PF07690 Major Facilitator Superfamily AL072_30900 PF00248 Aldo/keto reductase family AL072_30905 PF00248 Aldo/keto reductase family AL072_30940 PF00589 Phage integrase family AL072_30960 PF12833 Helix-turn-helix domain AL072_30960 PF12852 Cupin AL072_30965 PF00920 Dehydratase family AL072_30970 PF01408 Oxidoreductase family, NAD-binding Rossmann fold AL072_30975 PF02653 Branched-chain amino acid transport system / permease component AL072_30980 PF00005 ABC transporter AL072_30985 PF13407 Periplasmic binding protein domain AL072_30990 PF03466 LysR substrate binding domain AL072_30990 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AL072_30995 PF08450 SMP-30/Gluconolactonase/LRE-like region AL072_31000 PF00701 Dihydrodipicolinate synthetase family AL072_31005 PF00171 Aldehyde dehydrogenase family AL072_31015 PF13407 Periplasmic binding protein domain AL072_31020 PF00005 ABC transporter AL072_31025 PF02653 Branched-chain amino acid transport system / permease component AL072_31030 PF02653 Branched-chain amino acid transport system / permease component AL072_31065 PF01435 Peptidase family M48 AL072_31080 PF03738 Glutathionylspermidine synthase preATP-grasp AL072_31090 PF04095 Nicotinate phosphoribosyltransferase (NAPRTase) family AL072_31090 PF17767 Nicotinate phosphoribosyltransferase (NAPRTase) N-terminal domain AL072_31095 PF00293 NUDIX domain AL072_31095 PF01467 Cytidylyltransferase-like AL072_31100 PF03600 Citrate transporter AL072_31105 PF01874 ATP:dephospho-CoA triphosphoribosyl transferase AL072_31110 PF03977 Na+-transporting oxaloacetate decarboxylase beta subunit AL072_31120 PF16957 Malonate decarboxylase, alpha subunit, transporter AL072_31125 PF06857 Malonate decarboxylase delta subunit (MdcD) AL072_31130 PF01039 Carboxyl transferase domain AL072_31165 PF00005 ABC transporter AL072_31175 PF02632 BioY family AL072_31180 PF00672 HAMP domain AL072_31180 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain AL072_31190 PF00248 Aldo/keto reductase family AL072_31195 PF00106 short chain dehydrogenase AL072_31205 PF13426 PAS domain AL072_31205 PF07536 HWE histidine kinase AL072_31205 PF08447 PAS fold AL072_31215 PF00528 Binding-protein-dependent transport system inner membrane component AL072_31225 PF18267 Rubredoxin NAD+ reductase C-terminal domain AL072_31225 PF01077 Nitrite and sulphite reductase 4Fe-4S domain AL072_31225 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain AL072_31225 PF07992 Pyridine nucleotide-disulphide oxidoreductase AL072_31225 PF04324 BFD-like [2Fe-2S] binding domain AL072_31235 PF04324 BFD-like [2Fe-2S] binding domain AL072_31235 PF04879 Molybdopterin oxidoreductase Fe4S4 domain AL072_31235 PF01568 Molydopterin dinucleotide binding domain AL072_31235 PF00384 Molybdopterin oxidoreductase AL072_31240 PF10414 Sirohaem synthase dimerisation region AL072_31240 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases AL072_31240 PF14824 Sirohaem biosynthesis protein central AL072_31245 PF00877 NlpC/P60 family AL072_31245 PF18348 Bacterial dipeptidyl-peptidase Sh3 domain AL072_31255 PF00689 Cation transporting ATPase, C-terminus AL072_31255 PF00690 Cation transporter/ATPase, N-terminus AL072_31265 PF00561 alpha/beta hydrolase fold AL072_31265 PF07167 Poly-beta-hydroxybutyrate polymerase (PhaC) N-terminus AL072_31270 PF00072 Response regulator receiver domain AL072_31270 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AL072_31270 PF13426 PAS domain AL072_31295 PF13545 Crp-like helix-turn-helix domain AL072_31295 PF00027 Cyclic nucleotide-binding domain AL072_31305 PF00999 Sodium/hydrogen exchanger family AL072_31310 PF00296 Luciferase-like monooxygenase AL072_31345 PF01297 Zinc-uptake complex component A periplasmic AL072_31350 PF00950 ABC 3 transport family AL072_31355 PF00005 ABC transporter AL072_31365 PF00593 TonB dependent receptor AL072_31365 PF07715 TonB-dependent Receptor Plug Domain AL072_31375 PF01032 FecCD transport family AL072_31380 PF01497 Periplasmic binding protein AL072_31385 PF00005 ABC transporter AL072_31405 PF02119 Flagellar P-ring protein AL072_31415 PF00460 Flagella basal body rod protein AL072_31415 PF06429 Flagellar basal body rod FlgEFG protein C-terminal AL072_31420 PF06429 Flagellar basal body rod FlgEFG protein C-terminal AL072_31420 PF07559 Flagellar basal body protein FlaE AL072_31420 PF00460 Flagella basal body rod protein AL072_31425 PF00691 OmpA family AL072_31425 PF13677 Membrane MotB of proton-channel complex MotA/MotB AL072_31430 PF01618 MotA/TolQ/ExbB proton channel family AL072_31440 PF06429 Flagellar basal body rod FlgEFG protein C-terminal AL072_31440 PF00460 Flagella basal body rod protein AL072_31445 PF06429 Flagellar basal body rod FlgEFG protein C-terminal AL072_31445 PF00460 Flagella basal body rod protein AL072_31465 PF13614 AAA domain AL072_31470 PF02195 ParB-like nuclease domain AL072_31470 PF17762 HTH domain found in ParB protein AL072_31510 PF08751 TrwC relaxase AL072_31510 PF07057 DNA helicase TraI AL072_31510 PF18272 single-stranded DNA binding TraI N-terminal subdomain AL072_31510 PF18340 DNA relaxase TraI 2B/2B-like domain AL072_31515 PF01527 Transposase AL072_31520 PF13276 HTH-like domain AL072_31520 PF13333 Integrase core domain AL072_31520 PF00665 Integrase core domain AL072_31540 PF00733 Asparagine synthase AL072_31540 PF13537 Glutamine amidotransferase domain AL072_31550 PF00535 Glycosyl transferase family 2 AL072_31560 PF08241 Methyltransferase domain AL072_31570 PF13439 Glycosyltransferase Family 4 AL072_31570 PF00534 Glycosyl transferases group 1 AL072_31605 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family AL072_31610 PF01370 NAD dependent epimerase/dehydratase family AL072_31650 PF13358 DDE superfamily endonuclease AL072_31675 PF16363 GDP-mannose 4,6 dehydratase AL072_31680 PF16363 GDP-mannose 4,6 dehydratase AL072_31690 PF05958 tRNA (Uracil-5-)-methyltransferase AL072_31710 PF13439 Glycosyltransferase Family 4 AL072_31710 PF00534 Glycosyl transferases group 1 AL072_31715 PF01370 NAD dependent epimerase/dehydratase family AL072_31730 PF00664 ABC transporter transmembrane region AL072_31730 PF00005 ABC transporter AL072_31730 PF03412 Peptidase C39 family AL072_31760 PF02310 B12 binding domain AL072_31760 PF04055 Radical SAM superfamily AL072_31765 PF01370 NAD dependent epimerase/dehydratase family AL072_31790 PF00391 PEP-utilising enzyme, mobile domain AL072_31790 PF01326 Pyruvate phosphate dikinase, PEP/pyruvate binding domain AL072_31795 PF07722 Peptidase C26 AL072_31800 PF00483 Nucleotidyl transferase AL072_31835 PF01008 Initiation factor 2 subunit family AL072_31840 PF01048 Phosphorylase superfamily AL072_31845 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family AL072_31850 PF02779 Transketolase, pyrimidine binding domain AL072_31850 PF02780 Transketolase, C-terminal domain AL072_31855 PF00676 Dehydrogenase E1 component AL072_31860 PF01370 NAD dependent epimerase/dehydratase family AL072_31890 PF13419 Haloacid dehalogenase-like hydrolase AL072_32000 PF12323 Helix-turn-helix domain AL072_32000 PF07282 Putative transposase DNA-binding domain AL072_32000 PF01385 Probable transposase AL072_32010 PF16998 17 kDa outer membrane surface antigen AL072_32010 PF05433 Glycine zipper 2TM domain AL072_32040 PF00665 Integrase core domain AL072_32065 PF00239 Resolvase, N terminal domain AL072_32085 PF00977 Histidine biosynthesis protein AL072_32090 PF00117 Glutamine amidotransferase class-I AL072_32135 PF05711 Macrocin-O-methyltransferase (TylF) AL072_32165 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III AL072_32165 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal AL072_32190 PF01385 Probable transposase AL072_32190 PF12323 Helix-turn-helix domain AL072_32190 PF07282 Putative transposase DNA-binding domain AL072_32210 PF01850 PIN domain AL072_32225 PF00355 Rieske [2Fe-2S] domain AL072_32225 PF00848 Ring hydroxylating alpha subunit (catalytic domain) AL072_32295 PF00535 Glycosyl transferase family 2 AL072_32330 PF01205 Uncharacterized protein family UPF0029 AL072_32345 PF01943 Polysaccharide biosynthesis protein AL072_32345 PF14667 Polysaccharide biosynthesis C-terminal domain AL072_32350 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family AL072_32355 PF02719 Polysaccharide biosynthesis protein AL072_32370 PF00664 ABC transporter transmembrane region AL072_32370 PF00005 ABC transporter AL072_32385 PF01050 Mannose-6-phosphate isomerase AL072_32385 PF00483 Nucleotidyl transferase AL072_32395 PF00005 ABC transporter AL072_32395 PF00664 ABC transporter transmembrane region AL072_32395 PF03412 Peptidase C39 family AL072_32420 PF01370 NAD dependent epimerase/dehydratase family AL072_32425 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain AL072_32425 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain AL072_32425 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain AL072_32430 PF01370 NAD dependent epimerase/dehydratase family AL072_32435 PF00483 Nucleotidyl transferase AL072_32440 PF04321 RmlD substrate binding domain AL072_32445 PF16363 GDP-mannose 4,6 dehydratase AL072_32450 PF00908 dTDP-4-dehydrorhamnose 3,5-epimerase AL072_32455 PF00535 Glycosyl transferase family 2 AL072_32460 PF00005 ABC transporter AL072_32470 PF01507 Phosphoadenosine phosphosulfate reductase family AL072_32475 PF00009 Elongation factor Tu GTP binding domain AL072_32515 PF09849 Uncharacterized protein conserved in bacteria (DUF2076) AL072_32520 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain AL072_32520 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain AL072_32520 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain AL072_32535 PF05198 Translation initiation factor IF-3, N-terminal domain AL072_32535 PF00707 Translation initiation factor IF-3, C-terminal domain AL072_32545 PF00768 D-alanyl-D-alanine carboxypeptidase AL072_32545 PF07943 Penicillin-binding protein 5, C-terminal domain AL072_32555 PF00376 MerR family regulatory protein AL072_32555 PF09278 MerR, DNA binding AL072_32560 PF00403 Heavy-metal-associated domain AL072_32585 PF10503 Esterase PHB depolymerase AL072_32640 PF13276 HTH-like domain AL072_32640 PF00665 Integrase core domain AL072_32640 PF13333 Integrase core domain AL072_32645 PF01527 Transposase AL072_32660 PF13614 AAA domain AL072_32685 PF05717 IS66 Orf2 like protein AL072_32690 PF13005 zinc-finger binding domain of transposase IS66 AL072_32690 PF13007 Transposase C of IS166 homeodomain AL072_32690 PF13817 IS66 C-terminal element AL072_32690 PF03050 Transposase IS66 family AL072_32695 PF01527 Transposase AL072_32830 PF00069 Protein kinase domain AL072_32900 PF13614 AAA domain AL072_32905 PF17762 HTH domain found in ParB protein AL072_32905 PF02195 ParB-like nuclease domain AL072_33030 PF00072 Response regulator receiver domain AL072_33065 PF00589 Phage integrase family AL072_33065 PF02899 Phage integrase, N-terminal SAM-like domain