locus-tag class description DEW08_00010 PF00420 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L DEW08_00015 PF00499 NADH-ubiquinone/plastoquinone oxidoreductase chain 6 DEW08_00020 PF12838 4Fe-4S dicluster domain DEW08_00025 PF00146 NADH dehydrogenase DEW08_00030 PF09326 NADH-ubiquinone oxidoreductase subunit G, C-terminal DEW08_00030 PF10588 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region DEW08_00030 PF00384 Molybdopterin oxidoreductase DEW08_00035 PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit DEW08_00035 PF10531 SLBB domain DEW08_00035 PF10589 NADH-ubiquinone oxidoreductase-F iron-sulfur binding region DEW08_00045 PF00346 Respiratory-chain NADH dehydrogenase, 49 Kd subunit DEW08_00050 PF00329 Respiratory-chain NADH dehydrogenase, 30 Kd subunit DEW08_00055 PF01058 NADH ubiquinone oxidoreductase, 20 Kd subunit DEW08_00060 PF00507 NADH-ubiquinone/plastoquinone oxidoreductase, chain 3 DEW08_00095 PF00472 RF-1 domain DEW08_00115 PF01464 Transglycosylase SLT domain DEW08_00130 PF13291 ACT domain DEW08_00130 PF00291 Pyridoxal-phosphate dependent enzyme DEW08_00135 PF01613 Flavin reductase like domain DEW08_00140 PF00691 OmpA family DEW08_00140 PF13677 Membrane MotB of proton-channel complex MotA/MotB DEW08_00145 PF14403 Circularly permuted ATP-grasp type 2 DEW08_00150 PF04168 A predicted alpha-helical domain with a conserved ER motif. DEW08_00150 PF14403 Circularly permuted ATP-grasp type 2 DEW08_00155 PF04377 Arginine-tRNA-protein transferase, C terminus DEW08_00155 PF04376 Arginine-tRNA-protein transferase, N terminus DEW08_00165 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component DEW08_00170 PF03480 Bacterial extracellular solute-binding protein, family 7 DEW08_00175 PF00521 DNA gyrase/topoisomerase IV, subunit A DEW08_00175 PF03989 DNA gyrase C-terminal domain, beta-propeller DEW08_00180 PF11967 Recombination protein O N terminal DEW08_00180 PF02565 Recombination protein O C terminal DEW08_00185 PF08448 PAS fold DEW08_00185 PF08447 PAS fold DEW08_00185 PF00563 EAL domain DEW08_00185 PF00990 Diguanylate cyclase, GGDEF domain DEW08_00195 PF00154 recA bacterial DNA recombination protein DEW08_00200 PF00072 Response regulator receiver domain DEW08_00200 PF13188 PAS domain DEW08_00200 PF08448 PAS fold DEW08_00200 PF00512 His Kinase A (phospho-acceptor) domain DEW08_00200 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DEW08_00205 PF01312 FlhB HrpN YscU SpaS Family DEW08_00210 PF01311 Bacterial export proteins, family 1 DEW08_00215 PF01313 Bacterial export proteins, family 3 DEW08_00220 PF02049 Flagellar hook-basal body complex protein FliE DEW08_00225 PF06429 Flagellar basal body rod FlgEFG protein C-terminal DEW08_00230 PF00460 Flagella basal body rod protein DEW08_00240 PF01312 FlhB HrpN YscU SpaS Family DEW08_00255 PF00813 FliP family DEW08_00270 PF00691 OmpA family DEW08_00270 PF13677 Membrane MotB of proton-channel complex MotA/MotB DEW08_00315 PF00072 Response regulator receiver domain DEW08_00315 PF00486 Transcriptional regulatory protein, C terminal DEW08_00330 PF07690 Major Facilitator Superfamily DEW08_00335 PF03466 LysR substrate binding domain DEW08_00335 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family DEW08_00340 PF03060 Nitronate monooxygenase DEW08_00345 PF00378 Enoyl-CoA hydratase/isomerase DEW08_00355 PF00005 ABC transporter DEW08_00360 PF00005 ABC transporter DEW08_00360 PF12399 Branched-chain amino acid ATP-binding cassette transporter DEW08_00370 PF02653 Branched-chain amino acid transport system / permease component DEW08_00375 PF13458 Periplasmic binding protein DEW08_00380 PF00501 AMP-binding enzyme DEW08_00380 PF13193 AMP-binding enzyme C-terminal domain DEW08_00390 PF02798 Glutathione S-transferase, N-terminal domain DEW08_00390 PF00043 Glutathione S-transferase, C-terminal domain DEW08_00395 PF00158 Sigma-54 interaction domain DEW08_00395 PF02954 Bacterial regulatory protein, Fis family DEW08_00395 PF13185 GAF domain DEW08_00405 PF02653 Branched-chain amino acid transport system / permease component DEW08_00415 PF00005 ABC transporter DEW08_00420 PF12399 Branched-chain amino acid ATP-binding cassette transporter DEW08_00420 PF00005 ABC transporter DEW08_00435 PF07683 Cobalamin synthesis protein cobW C-terminal domain DEW08_00435 PF02492 CobW/HypB/UreG, nucleotide-binding domain DEW08_00440 PF02514 CobN/Magnesium Chelatase DEW08_00445 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain DEW08_00450 PF02570 Precorrin-8X methylmutase DEW08_00455 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases DEW08_00460 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases DEW08_00465 PF02571 Precorrin-6x reductase CbiJ/CobK DEW08_00470 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases DEW08_00480 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases DEW08_00485 PF01888 CbiD DEW08_00490 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases DEW08_00500 PF00881 Nitroreductase family DEW08_00505 PF03707 Bacterial signalling protein N terminal repeat DEW08_00505 PF00563 EAL domain DEW08_00505 PF00990 Diguanylate cyclase, GGDEF domain DEW08_00515 PF01367 5'-3' exonuclease, C-terminal SAM fold DEW08_00515 PF00476 DNA polymerase family A DEW08_00515 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain DEW08_00515 PF01612 3'-5' exonuclease DEW08_00530 PF13657 HipA N-terminal domain DEW08_00530 PF07804 HipA-like C-terminal domain DEW08_00535 PF01116 Fructose-bisphosphate aldolase class-II DEW08_00540 PF00501 AMP-binding enzyme DEW08_00540 PF13193 AMP-binding enzyme C-terminal domain DEW08_00545 PF05922 Peptidase inhibitor I9 DEW08_00545 PF00082 Subtilase family DEW08_00550 PF00664 ABC transporter transmembrane region DEW08_00550 PF00005 ABC transporter DEW08_00560 PF08992 Quinohemoprotein amine dehydrogenase, gamma subunit DEW08_00565 PF04055 Radical SAM superfamily DEW08_00565 PF13186 Iron-sulfur cluster-binding domain DEW08_00580 PF12833 Helix-turn-helix domain DEW08_00580 PF14525 AraC-binding-like domain DEW08_00585 PF00209 Sodium:neurotransmitter symporter family DEW08_00590 PF00208 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase DEW08_00590 PF02812 Glu/Leu/Phe/Val dehydrogenase, dimerisation domain DEW08_00630 PF00384 Molybdopterin oxidoreductase DEW08_00630 PF04879 Molybdopterin oxidoreductase Fe4S4 domain DEW08_00630 PF01568 Molydopterin dinucleotide binding domain DEW08_00635 PF13247 4Fe-4S dicluster domain DEW08_00640 PF01292 Prokaryotic cytochrome b561 DEW08_00645 PF02445 Quinolinate synthetase A protein DEW08_00655 PF01729 Quinolinate phosphoribosyl transferase, C-terminal domain DEW08_00655 PF02749 Quinolinate phosphoribosyl transferase, N-terminal domain DEW08_00670 PF00285 Citrate synthase, C-terminal domain DEW08_00680 PF02463 RecF/RecN/SMC N terminal domain DEW08_00690 PF00877 NlpC/P60 family DEW08_00695 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases DEW08_00695 PF10414 Sirohaem synthase dimerisation region DEW08_00695 PF14824 Sirohaem biosynthesis protein central DEW08_00700 PF00384 Molybdopterin oxidoreductase DEW08_00700 PF04879 Molybdopterin oxidoreductase Fe4S4 domain DEW08_00700 PF04324 BFD-like [2Fe-2S] binding domain DEW08_00700 PF01568 Molydopterin dinucleotide binding domain DEW08_00705 PF00355 Rieske [2Fe-2S] domain DEW08_00710 PF18267 Rubredoxin NAD+ reductase C-terminal domain DEW08_00710 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain DEW08_00710 PF01077 Nitrite and sulphite reductase 4Fe-4S domain DEW08_00710 PF07992 Pyridine nucleotide-disulphide oxidoreductase DEW08_00710 PF04324 BFD-like [2Fe-2S] binding domain DEW08_00720 PF02195 ParB-like nuclease domain DEW08_00720 PF17762 HTH domain found in ParB protein DEW08_00725 PF13614 AAA domain DEW08_00775 PF00313 'Cold-shock' DNA-binding domain DEW08_00785 PF10503 Esterase PHB depolymerase DEW08_00805 PF00480 ROK family DEW08_00815 PF00528 Binding-protein-dependent transport system inner membrane component DEW08_00820 PF00528 Binding-protein-dependent transport system inner membrane component DEW08_00835 PF01232 Mannitol dehydrogenase Rossmann domain DEW08_00835 PF08125 Mannitol dehydrogenase C-terminal domain DEW08_00840 PF00294 pfkB family carbohydrate kinase DEW08_00900 PF03865 Haemolysin secretion/activation protein ShlB/FhaC/HecB DEW08_00900 PF08479 POTRA domain, ShlB-type DEW08_00910 PF00512 His Kinase A (phospho-acceptor) domain DEW08_00910 PF00072 Response regulator receiver domain DEW08_00910 PF17149 Periplasmic sensor domain found in signal transduction proteins DEW08_00910 PF00672 HAMP domain DEW08_00910 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DEW08_00910 PF01627 Hpt domain DEW08_00915 PF00072 Response regulator receiver domain DEW08_00915 PF00486 Transcriptional regulatory protein, C terminal DEW08_00920 PF00072 Response regulator receiver domain DEW08_00920 PF01627 Hpt domain DEW08_00920 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DEW08_00920 PF00512 His Kinase A (phospho-acceptor) domain DEW08_00920 PF00672 HAMP domain DEW08_00920 PF17149 Periplasmic sensor domain found in signal transduction proteins DEW08_00925 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DEW08_00925 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) DEW08_00925 PF01627 Hpt domain DEW08_00925 PF00512 His Kinase A (phospho-acceptor) domain DEW08_00925 PF00072 Response regulator receiver domain DEW08_00925 PF00672 HAMP domain DEW08_00930 PF00356 Bacterial regulatory proteins, lacI family DEW08_00930 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family DEW08_00935 PF00083 Sugar (and other) transporter DEW08_00935 PF07690 Major Facilitator Superfamily DEW08_00950 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase DEW08_00950 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase DEW08_00955 PF08450 SMP-30/Gluconolactonase/LRE-like region DEW08_00965 PF03328 HpcH/HpaI aldolase/citrate lyase family DEW08_00970 PF00920 Dehydratase family DEW08_00990 PF00106 short chain dehydrogenase DEW08_01000 PF03358 NADPH-dependent FMN reductase DEW08_01010 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family DEW08_01010 PF03466 LysR substrate binding domain DEW08_01020 PF02678 Pirin DEW08_01020 PF05726 Pirin C-terminal cupin domain DEW08_01025 PF03466 LysR substrate binding domain DEW08_01025 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family DEW08_01045 PF00368 Hydroxymethylglutaryl-coenzyme A reductase DEW08_01070 PF01032 FecCD transport family DEW08_01075 PF00005 ABC transporter DEW08_01090 PF01654 Cytochrome bd terminal oxidase subunit I DEW08_01095 PF02322 Cytochrome bd terminal oxidase subunit II DEW08_01105 PF00664 ABC transporter transmembrane region DEW08_01105 PF00005 ABC transporter DEW08_01110 PF00664 ABC transporter transmembrane region DEW08_01110 PF00005 ABC transporter DEW08_01115 PF00027 Cyclic nucleotide-binding domain DEW08_01115 PF13545 Crp-like helix-turn-helix domain DEW08_01120 PF04542 Sigma-70 region 2 DEW08_01120 PF08281 Sigma-70, region 4 DEW08_01130 PF07715 TonB-dependent Receptor Plug Domain DEW08_01130 PF00593 TonB dependent receptor DEW08_01140 PF06276 Ferric iron reductase FhuF-like transporter DEW08_01140 PF04183 IucA / IucC family DEW08_01155 PF01261 Xylose isomerase-like TIM barrel DEW08_01160 PF00672 HAMP domain DEW08_01160 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain DEW08_01165 PF00528 Binding-protein-dependent transport system inner membrane component DEW08_01170 PF00528 Binding-protein-dependent transport system inner membrane component DEW08_01175 PF13416 Bacterial extracellular solute-binding protein DEW08_01180 PF17912 MalK OB fold domain DEW08_01180 PF00005 ABC transporter DEW08_01185 PF16350 FAD dependent oxidoreductase central domain DEW08_01185 PF08669 Glycine cleavage T-protein C-terminal barrel domain DEW08_01185 PF01266 FAD dependent oxidoreductase DEW08_01185 PF01571 Aminomethyltransferase folate-binding domain DEW08_01190 PF13419 Haloacid dehalogenase-like hydrolase DEW08_01195 PF00266 Aminotransferase class-V DEW08_01200 PF03466 LysR substrate binding domain DEW08_01200 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family DEW08_01215 PF00528 Binding-protein-dependent transport system inner membrane component DEW08_01220 PF00005 ABC transporter DEW08_01235 PF05198 Translation initiation factor IF-3, N-terminal domain DEW08_01235 PF00707 Translation initiation factor IF-3, C-terminal domain DEW08_01245 PF02615 Malate/L-lactate dehydrogenase DEW08_01265 PF00459 Inositol monophosphatase family DEW08_01270 PF08402 TOBE domain DEW08_01270 PF00005 ABC transporter DEW08_01275 PF00528 Binding-protein-dependent transport system inner membrane component DEW08_01285 PF00356 Bacterial regulatory proteins, lacI family DEW08_01295 PF07690 Major Facilitator Superfamily DEW08_01305 PF07992 Pyridine nucleotide-disulphide oxidoreductase DEW08_01310 PF00512 His Kinase A (phospho-acceptor) domain DEW08_01310 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DEW08_01310 PF00989 PAS fold DEW08_01315 PF00158 Sigma-54 interaction domain DEW08_01315 PF00072 Response regulator receiver domain DEW08_01315 PF02954 Bacterial regulatory protein, Fis family DEW08_01350 PF00145 C-5 cytosine-specific DNA methylase DEW08_01415 PF00182 Chitinase class I DEW08_01535 PF03354 Phage Terminase DEW08_01565 PF02357 Transcription termination factor nusG DEW08_01565 PF00467 KOW motif DEW08_01590 PF04851 Type III restriction enzyme, res subunit DEW08_01590 PF00271 Helicase conserved C-terminal domain DEW08_01630 PF00565 Staphylococcal nuclease homologue DEW08_01650 PF18335 ATP-dependent RecD-like DNA helicase SH3 domain DEW08_01650 PF14490 Helix-hairpin-helix containing domain DEW08_01650 PF13538 UvrD-like helicase C-terminal domain DEW08_01700 PF00005 ABC transporter DEW08_01710 PF00990 Diguanylate cyclase, GGDEF domain DEW08_01710 PF03707 Bacterial signalling protein N terminal repeat DEW08_01710 PF00563 EAL domain DEW08_01725 PF11842 Domain of unknown function (DUF3362) DEW08_01725 PF08497 Radical SAM N-terminal DEW08_01725 PF04055 Radical SAM superfamily DEW08_01730 PF00550 Phosphopantetheine attachment site DEW08_01760 PF01546 Peptidase family M20/M25/M40 DEW08_01760 PF07687 Peptidase dimerisation domain DEW08_01765 PF07687 Peptidase dimerisation domain DEW08_01765 PF01546 Peptidase family M20/M25/M40 DEW08_01785 PF08459 UvrC Helix-hairpin-helix N-terminal DEW08_01785 PF02151 UvrB/uvrC motif DEW08_01785 PF12826 Helix-hairpin-helix motif DEW08_01785 PF01541 GIY-YIG catalytic domain DEW08_01790 PF00478 IMP dehydrogenase / GMP reductase domain DEW08_01795 PF00501 AMP-binding enzyme DEW08_01795 PF13193 AMP-binding enzyme C-terminal domain DEW08_01800 PF00376 MerR family regulatory protein DEW08_01800 PF09278 MerR, DNA binding DEW08_01810 PF03454 MoeA C-terminal region (domain IV) DEW08_01810 PF03453 MoeA N-terminal region (domain I and II) DEW08_01810 PF00994 Probable molybdopterin binding domain DEW08_01815 PF01967 MoaC family DEW08_01820 PF00583 Acetyltransferase (GNAT) family DEW08_01825 PF00218 Indole-3-glycerol phosphate synthase DEW08_01830 PF00591 Glycosyl transferase family, a/b domain DEW08_01830 PF02885 Glycosyl transferase family, helical bundle domain DEW08_01835 PF00117 Glutamine amidotransferase class-I DEW08_01865 PF00425 chorismate binding enzyme DEW08_01865 PF04715 Anthranilate synthase component I, N terminal region DEW08_01870 PF13145 PPIC-type PPIASE domain DEW08_01880 PF03840 Preprotein translocase SecG subunit DEW08_01885 PF06418 CTP synthase N-terminus DEW08_01885 PF00117 Glutamine amidotransferase class-I DEW08_01895 PF00078 Reverse transcriptase (RNA-dependent DNA polymerase) DEW08_01900 PF00657 GDSL-like Lipase/Acylhydrolase DEW08_01900 PF03797 Autotransporter beta-domain DEW08_01905 PF01738 Dienelactone hydrolase family DEW08_01910 PF00793 DAHP synthetase I family DEW08_01925 PF00196 Bacterial regulatory proteins, luxR family DEW08_01925 PF00072 Response regulator receiver domain DEW08_01930 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion DEW08_01930 PF00529 HlyD membrane-fusion protein of T1SS DEW08_01940 PF08534 Redoxin DEW08_01950 PF03952 Enolase, N-terminal domain DEW08_01950 PF00113 Enolase, C-terminal TIM barrel domain DEW08_01955 PF12697 Alpha/beta hydrolase family DEW08_01970 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term DEW08_01975 PF00291 Pyridoxal-phosphate dependent enzyme DEW08_01985 PF00005 ABC transporter DEW08_01990 PF00528 Binding-protein-dependent transport system inner membrane component DEW08_01995 PF09084 NMT1/THI5 like DEW08_02000 PF03960 ArsC family DEW08_02005 PF08448 PAS fold DEW08_02005 PF13188 PAS domain DEW08_02005 PF00512 His Kinase A (phospho-acceptor) domain DEW08_02005 PF00072 Response regulator receiver domain DEW08_02005 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DEW08_02025 PF03372 Endonuclease/Exonuclease/phosphatase family DEW08_02030 PF01521 Iron-sulphur cluster biosynthesis DEW08_02035 PF13286 Phosphohydrolase-associated domain DEW08_02035 PF01966 HD domain DEW08_02040 PF03485 Arginyl tRNA synthetase N terminal domain DEW08_02040 PF05746 DALR anticodon binding domain DEW08_02040 PF00750 tRNA synthetases class I (R) DEW08_02050 PF00933 Glycosyl hydrolase family 3 N terminal domain DEW08_02055 PF02163 Peptidase family M50 DEW08_02060 PF02616 Segregation and condensation protein ScpA DEW08_02065 PF04079 Segregation and condensation complex subunit ScpB DEW08_02070 PF02416 mttA/Hcf106 family DEW08_02075 PF02416 mttA/Hcf106 family DEW08_02080 PF00902 Sec-independent protein translocase protein (TatC) DEW08_02095 PF02690 Na+/Pi-cotransporter DEW08_02100 PF02403 Seryl-tRNA synthetase N-terminal domain DEW08_02100 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) DEW08_02105 PF01975 Survival protein SurE DEW08_02115 PF01551 Peptidase family M23 DEW08_02115 PF01476 LysM domain DEW08_02125 PF02699 Preprotein translocase subunit DEW08_02130 PF07549 SecD/SecF GG Motif DEW08_02130 PF02355 Protein export membrane protein DEW08_02135 PF07549 SecD/SecF GG Motif DEW08_02135 PF02355 Protein export membrane protein DEW08_02140 PF04430 Protein of unknown function (DUF498/DUF598) DEW08_02150 PF00078 Reverse transcriptase (RNA-dependent DNA polymerase) DEW08_02155 PF02777 Iron/manganese superoxide dismutases, C-terminal domain DEW08_02155 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain DEW08_02160 PF01593 Flavin containing amine oxidoreductase DEW08_02180 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily DEW08_02185 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain DEW08_02185 PF16591 Helical bimodular sensor domain DEW08_02185 PF00672 HAMP domain DEW08_02190 PF01134 Glucose inhibited division protein A DEW08_02205 PF17760 UvrA interaction domain DEW08_02205 PF17755 UvrA DNA-binding domain DEW08_02210 PF00436 Single-strand binding protein family DEW08_02240 PF03989 DNA gyrase C-terminal domain, beta-propeller DEW08_02240 PF00521 DNA gyrase/topoisomerase IV, subunit A DEW08_02245 PF01467 Cytidylyltransferase-like DEW08_02285 PF00270 DEAD/DEAH box helicase DEW08_02285 PF08148 DSHCT (NUC185) domain DEW08_02285 PF00271 Helicase conserved C-terminal domain DEW08_02290 PF00239 Resolvase, N terminal domain DEW08_02290 PF02796 Helix-turn-helix domain of resolvase DEW08_02315 PF02899 Phage integrase, N-terminal SAM-like domain DEW08_02315 PF00589 Phage integrase family DEW08_02325 PF01047 MarR family DEW08_02330 PF07690 Major Facilitator Superfamily DEW08_02340 PF00171 Aldehyde dehydrogenase family DEW08_02345 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion DEW08_02350 PF00873 AcrB/AcrD/AcrF family DEW08_02355 PF02550 Acetyl-CoA hydrolase/transferase N-terminal domain DEW08_02355 PF13336 Acetyl-CoA hydrolase/transferase C-terminal domain DEW08_02365 PF00117 Glutamine amidotransferase class-I DEW08_02365 PF00988 Carbamoyl-phosphate synthase small chain, CPSase domain DEW08_02370 PF00005 ABC transporter DEW08_02370 PF00664 ABC transporter transmembrane region DEW08_02385 PF13439 Glycosyltransferase Family 4 DEW08_02385 PF00534 Glycosyl transferases group 1 DEW08_02400 PF13614 AAA domain DEW08_02400 PF02706 Chain length determinant protein DEW08_02400 PF13807 G-rich domain on putative tyrosine kinase DEW08_02410 PF00149 Calcineurin-like phosphoesterase DEW08_02415 PF02563 Polysaccharide biosynthesis/export protein DEW08_02435 PF02397 Bacterial sugar transferase DEW08_02440 PF03808 Glycosyl transferase WecB/TagA/CpsF family DEW08_02450 PF03061 Thioesterase superfamily DEW08_02455 PF18321 3-hydroxybutyryl-CoA dehydrogenase reduced Rossmann-fold domain DEW08_02455 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain DEW08_02455 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain DEW08_02460 PF00378 Enoyl-CoA hydratase/isomerase DEW08_02465 PF00171 Aldehyde dehydrogenase family DEW08_02470 PF00175 Oxidoreductase NAD-binding domain DEW08_02470 PF00111 2Fe-2S iron-sulfur cluster binding domain DEW08_02470 PF00970 Oxidoreductase FAD-binding domain DEW08_02475 PF01883 Iron-sulfur cluster assembly protein DEW08_02480 PF05138 Phenylacetic acid catabolic protein DEW08_02485 PF06243 Phenylacetic acid degradation B DEW08_02490 PF05138 Phenylacetic acid catabolic protein DEW08_02495 PF00512 His Kinase A (phospho-acceptor) domain DEW08_02495 PF16767 Sensor domain of alginate biosynthesis sensor protein KinB DEW08_02495 PF08448 PAS fold DEW08_02495 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DEW08_02495 PF00672 HAMP domain DEW08_02505 PF02566 OsmC-like protein DEW08_02510 PF08376 Nitrate and nitrite sensing DEW08_02510 PF03861 ANTAR domain DEW08_02515 PF00005 ABC transporter DEW08_02525 PF00528 Binding-protein-dependent transport system inner membrane component DEW08_02530 PF00005 ABC transporter DEW08_02535 PF18024 Helix-turn-helix domain DEW08_02535 PF00158 Sigma-54 interaction domain DEW08_02540 PF01266 FAD dependent oxidoreductase DEW08_02550 PF00398 Ribosomal RNA adenine dimethylase DEW08_02555 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain DEW08_02555 PF00672 HAMP domain DEW08_02575 PF00672 HAMP domain DEW08_02575 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain DEW08_02585 PF00072 Response regulator receiver domain DEW08_02585 PF01584 CheW-like domain DEW08_02585 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DEW08_02585 PF01627 Hpt domain DEW08_02590 PF00072 Response regulator receiver domain DEW08_02590 PF01339 CheB methylesterase DEW08_02595 PF00486 Transcriptional regulatory protein, C terminal DEW08_02595 PF00072 Response regulator receiver domain DEW08_02600 PF00672 HAMP domain DEW08_02600 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DEW08_02600 PF00512 His Kinase A (phospho-acceptor) domain DEW08_02600 PF01627 Hpt domain DEW08_02600 PF00072 Response regulator receiver domain DEW08_02605 PF00990 Diguanylate cyclase, GGDEF domain DEW08_02605 PF00563 EAL domain DEW08_02605 PF03707 Bacterial signalling protein N terminal repeat DEW08_02610 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DEW08_02610 PF00672 HAMP domain DEW08_02610 PF13426 PAS domain DEW08_02610 PF00512 His Kinase A (phospho-acceptor) domain DEW08_02615 PF09345 Domain of unknown function (DUF1987) DEW08_02655 PF13193 AMP-binding enzyme C-terminal domain DEW08_02655 PF00501 AMP-binding enzyme DEW08_02660 PF00392 Bacterial regulatory proteins, gntR family DEW08_02660 PF07729 FCD domain DEW08_02665 PF02771 Acyl-CoA dehydrogenase, N-terminal domain DEW08_02665 PF02770 Acyl-CoA dehydrogenase, middle domain DEW08_02665 PF00441 Acyl-CoA dehydrogenase, C-terminal domain DEW08_02670 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase DEW08_02670 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase DEW08_02675 PF01850 PIN domain DEW08_02685 PF00501 AMP-binding enzyme DEW08_02685 PF13193 AMP-binding enzyme C-terminal domain DEW08_02690 PF00005 ABC transporter DEW08_02690 PF12399 Branched-chain amino acid ATP-binding cassette transporter DEW08_02695 PF00501 AMP-binding enzyme DEW08_02700 PF02653 Branched-chain amino acid transport system / permease component DEW08_02715 PF00005 ABC transporter DEW08_02720 PF00501 AMP-binding enzyme DEW08_02720 PF13193 AMP-binding enzyme C-terminal domain DEW08_02725 PF00171 Aldehyde dehydrogenase family DEW08_02730 PF02771 Acyl-CoA dehydrogenase, N-terminal domain DEW08_02730 PF02770 Acyl-CoA dehydrogenase, middle domain DEW08_02730 PF00441 Acyl-CoA dehydrogenase, C-terminal domain DEW08_02735 PF02803 Thiolase, C-terminal domain DEW08_02735 PF00108 Thiolase, N-terminal domain DEW08_02740 PF02771 Acyl-CoA dehydrogenase, N-terminal domain DEW08_02740 PF02770 Acyl-CoA dehydrogenase, middle domain DEW08_02740 PF00441 Acyl-CoA dehydrogenase, C-terminal domain DEW08_02745 PF01039 Carboxyl transferase domain DEW08_02750 PF00378 Enoyl-CoA hydratase/isomerase DEW08_02755 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain DEW08_02755 PF00289 Biotin carboxylase, N-terminal domain DEW08_02755 PF00364 Biotin-requiring enzyme DEW08_02755 PF02785 Biotin carboxylase C-terminal domain DEW08_02760 PF00682 HMGL-like DEW08_02770 PF00919 Uncharacterized protein family UPF0004 DEW08_02770 PF18693 TRAM domain DEW08_02770 PF04055 Radical SAM superfamily DEW08_02780 PF00512 His Kinase A (phospho-acceptor) domain DEW08_02780 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DEW08_02780 PF08448 PAS fold DEW08_02780 PF13188 PAS domain DEW08_02780 PF00072 Response regulator receiver domain DEW08_02790 PF00027 Cyclic nucleotide-binding domain DEW08_02790 PF13545 Crp-like helix-turn-helix domain DEW08_02815 PF00211 Adenylate and Guanylate cyclase catalytic domain DEW08_02815 PF13191 AAA ATPase domain DEW08_02820 PF00072 Response regulator receiver domain DEW08_02820 PF00211 Adenylate and Guanylate cyclase catalytic domain DEW08_02830 PF01047 MarR family DEW08_02835 PF13533 Biotin-lipoyl like DEW08_02840 PF07690 Major Facilitator Superfamily DEW08_02850 PF13167 GTP-binding GTPase N-terminal DEW08_02850 PF01926 50S ribosome-binding GTPase DEW08_02850 PF16360 GTP-binding GTPase Middle Region DEW08_02875 PF02608 ABC transporter substrate-binding protein PnrA-like DEW08_02885 PF00849 RNA pseudouridylate synthase DEW08_02885 PF01479 S4 domain DEW08_02895 PF01556 DnaJ C terminal domain DEW08_02895 PF00684 DnaJ central domain DEW08_02895 PF00226 DnaJ domain DEW08_02900 PF00483 Nucleotidyl transferase DEW08_02905 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain DEW08_02905 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain DEW08_02905 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain DEW08_02915 PF10503 Esterase PHB depolymerase DEW08_02920 PF01274 Malate synthase DEW08_02965 PF04172 LrgB-like family DEW08_02970 PF03788 LrgA family DEW08_02975 PF03466 LysR substrate binding domain DEW08_02975 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family DEW08_02980 PF02110 Hydroxyethylthiazole kinase family DEW08_02980 PF02581 Thiamine monophosphate synthase DEW08_02990 PF03737 Aldolase/RraA DEW08_02995 PF11791 Aconitate B N-terminal domain DEW08_02995 PF06434 Aconitate hydratase 2 N-terminus DEW08_02995 PF00330 Aconitase family (aconitate hydratase) DEW08_03005 PF00248 Aldo/keto reductase family DEW08_03015 PF02653 Branched-chain amino acid transport system / permease component DEW08_03020 PF00005 ABC transporter DEW08_03025 PF00392 Bacterial regulatory proteins, gntR family DEW08_03025 PF07729 FCD domain DEW08_03030 PF05025 RbsD / FucU transport protein family DEW08_03045 PF04828 Glutathione-dependent formaldehyde-activating enzyme DEW08_03050 PF01799 [2Fe-2S] binding domain DEW08_03050 PF00111 2Fe-2S iron-sulfur cluster binding domain DEW08_03055 PF00941 FAD binding domain in molybdopterin dehydrogenase DEW08_03055 PF03450 CO dehydrogenase flavoprotein C-terminal domain DEW08_03060 PF01315 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain DEW08_03060 PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase DEW08_03075 PF02627 Carboxymuconolactone decarboxylase family DEW08_03080 PF00034 Cytochrome c DEW08_03085 PF00115 Cytochrome C and Quinol oxidase polypeptide I DEW08_03090 PF08406 CbbQ/NirQ/NorQ C-terminal DEW08_03090 PF07728 AAA domain (dynein-related subfamily) DEW08_03095 PF00092 von Willebrand factor type A domain DEW08_03100 PF00510 Cytochrome c oxidase subunit III DEW08_03110 PF07732 Multicopper oxidase DEW08_03130 PF01380 SIS domain DEW08_03135 PF12804 MobA-like NTP transferase domain DEW08_03135 PF14602 Hexapeptide repeat of succinyl-transferase DEW08_03135 PF00132 Bacterial transferase hexapeptide (six repeats) DEW08_03140 PF13419 Haloacid dehalogenase-like hydrolase DEW08_03175 PF02569 Pantoate-beta-alanine ligase DEW08_03190 PF01425 Amidase DEW08_03195 PF07043 Protein of unknown function (DUF1328) DEW08_03210 PF01575 MaoC like domain DEW08_03220 PF03358 NADPH-dependent FMN reductase DEW08_03225 PF01381 Helix-turn-helix DEW08_03230 PF00583 Acetyltransferase (GNAT) family DEW08_03235 PF01011 PQQ enzyme repeat DEW08_03240 PF00795 Carbon-nitrogen hydrolase DEW08_03255 PF00528 Binding-protein-dependent transport system inner membrane component DEW08_03260 PF08402 TOBE domain DEW08_03260 PF00005 ABC transporter DEW08_03270 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family DEW08_03270 PF03466 LysR substrate binding domain DEW08_03275 PF00196 Bacterial regulatory proteins, luxR family DEW08_03275 PF00072 Response regulator receiver domain DEW08_03280 PF05067 Manganese containing catalase DEW08_03285 PF01192 RNA polymerase Rpb6 DEW08_03305 PF13188 PAS domain DEW08_03305 PF00563 EAL domain DEW08_03305 PF00990 Diguanylate cyclase, GGDEF domain DEW08_03305 PF03707 Bacterial signalling protein N terminal repeat DEW08_03310 PF02080 TrkA-C domain DEW08_03310 PF03471 Transporter associated domain DEW08_03310 PF00999 Sodium/hydrogen exchanger family DEW08_03325 PF01734 Patatin-like phospholipase DEW08_03335 PF03091 CutA1 divalent ion tolerance protein DEW08_03365 PF08275 DNA primase catalytic core, N-terminal domain DEW08_03365 PF10410 DnaB-helicase binding domain of primase DEW08_03365 PF08278 DNA primase DnaG DnaB-binding DEW08_03365 PF01807 CHC2 zinc finger DEW08_03365 PF13662 Toprim domain DEW08_03370 PF00140 Sigma-70 factor, region 1.2 DEW08_03370 PF04542 Sigma-70 region 2 DEW08_03370 PF04546 Sigma-70, non-essential region DEW08_03370 PF04539 Sigma-70 region 3 DEW08_03370 PF04545 Sigma-70, region 4 DEW08_03370 PF03979 Sigma-70 factor, region 1.1 DEW08_03405 PF00872 Transposase, Mutator family DEW08_03410 PF18019 HD domain DEW08_03410 PF00271 Helicase conserved C-terminal domain DEW08_03410 PF00270 DEAD/DEAH box helicase DEW08_03440 PF01867 CRISPR associated protein Cas1 DEW08_03455 PF05717 IS66 Orf2 like protein DEW08_03510 PF00276 Ribosomal protein L23 DEW08_03545 PF07690 Major Facilitator Superfamily DEW08_03550 PF07687 Peptidase dimerisation domain DEW08_03550 PF01546 Peptidase family M20/M25/M40 DEW08_03565 PF01144 Coenzyme A transferase DEW08_03570 PF01144 Coenzyme A transferase DEW08_03575 PF02667 Short chain fatty acid transporter DEW08_03580 PF02803 Thiolase, C-terminal domain DEW08_03580 PF00108 Thiolase, N-terminal domain DEW08_03585 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain DEW08_03585 PF00672 HAMP domain DEW08_03585 PF17200 Single Cache domain 2 DEW08_03595 PF00873 AcrB/AcrD/AcrF family DEW08_03600 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion DEW08_03605 PF00440 Bacterial regulatory proteins, tetR family DEW08_03610 PF00722 Glycosyl hydrolases family 16 DEW08_03610 PF00353 RTX calcium-binding nonapeptide repeat (4 copies) DEW08_03615 PF03006 Haemolysin-III related DEW08_03620 PF08521 Two-component sensor kinase N-terminal DEW08_03620 PF00512 His Kinase A (phospho-acceptor) domain DEW08_03620 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DEW08_03625 PF00486 Transcriptional regulatory protein, C terminal DEW08_03625 PF00072 Response regulator receiver domain DEW08_03635 PF03741 Integral membrane protein TerC family DEW08_03640 PF01970 Tripartite tricarboxylate transporter TctA family DEW08_03670 PF00593 TonB dependent receptor DEW08_03670 PF07715 TonB-dependent Receptor Plug Domain DEW08_03675 PF05171 Haemin-degrading HemS.ChuX domain DEW08_03680 PF01497 Periplasmic binding protein DEW08_03685 PF01032 FecCD transport family DEW08_03690 PF00005 ABC transporter DEW08_03695 PF13416 Bacterial extracellular solute-binding protein DEW08_03700 PF08402 TOBE domain DEW08_03700 PF00005 ABC transporter DEW08_03705 PF00528 Binding-protein-dependent transport system inner membrane component DEW08_03710 PF00528 Binding-protein-dependent transport system inner membrane component DEW08_03715 PF04371 Porphyromonas-type peptidyl-arginine deiminase DEW08_03720 PF00672 HAMP domain DEW08_03720 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain DEW08_03720 PF02203 Tar ligand binding domain homologue DEW08_03735 PF00872 Transposase, Mutator family DEW08_03755 PF00665 Integrase core domain DEW08_03755 PF02796 Helix-turn-helix domain of resolvase DEW08_03760 PF01695 IstB-like ATP binding protein DEW08_03785 PF01555 DNA methylase DEW08_03785 PF18273 Type III R-M EcoP15I C-terminal domain DEW08_03805 PF00271 Helicase conserved C-terminal domain DEW08_03805 PF00176 SNF2 family N-terminal domain DEW08_03825 PF00589 Phage integrase family DEW08_03865 PF17863 AAA lid domain DEW08_03865 PF07726 ATPase family associated with various cellular activities (AAA) DEW08_03885 PF02525 Flavodoxin-like fold DEW08_03895 PF01218 Coproporphyrinogen III oxidase DEW08_03900 PF00588 SpoU rRNA Methylase family DEW08_03905 PF10399 Ubiquitinol-cytochrome C reductase Fe-S subunit TAT signal DEW08_03905 PF00355 Rieske [2Fe-2S] domain DEW08_03910 PF00032 Cytochrome b(C-terminal)/b6/petD DEW08_03910 PF00033 Cytochrome b/b6/petB DEW08_03915 PF02167 Cytochrome C1 family DEW08_03915 PF00032 Cytochrome b(C-terminal)/b6/petD DEW08_03915 PF00033 Cytochrome b/b6/petB DEW08_03925 PF00072 Response regulator receiver domain DEW08_03925 PF00672 HAMP domain DEW08_03925 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DEW08_03925 PF01627 Hpt domain DEW08_03925 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) DEW08_03925 PF00512 His Kinase A (phospho-acceptor) domain DEW08_03935 PF01022 Bacterial regulatory protein, arsR family DEW08_03940 PF01206 Sulfurtransferase TusA DEW08_03945 PF00850 Histone deacetylase domain DEW08_03950 PF02609 Exonuclease VII small subunit DEW08_03955 PF00348 Polyprenyl synthetase DEW08_03960 PF02780 Transketolase, C-terminal domain DEW08_03960 PF02779 Transketolase, pyrimidine binding domain DEW08_03960 PF13292 1-deoxy-D-xylulose-5-phosphate synthase DEW08_03965 PF00311 Phosphoenolpyruvate carboxylase DEW08_03985 PF00072 Response regulator receiver domain DEW08_03985 PF01627 Hpt domain DEW08_03985 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) DEW08_03985 PF00512 His Kinase A (phospho-acceptor) domain DEW08_03985 PF00672 HAMP domain DEW08_03985 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DEW08_03990 PF00072 Response regulator receiver domain DEW08_03995 PF13188 PAS domain DEW08_03995 PF03707 Bacterial signalling protein N terminal repeat DEW08_03995 PF00563 EAL domain DEW08_03995 PF00990 Diguanylate cyclase, GGDEF domain DEW08_04000 PF00152 tRNA synthetases class II (D, K and N) DEW08_04005 PF08207 Elongation factor P (EF-P) KOW-like domain DEW08_04005 PF01132 Elongation factor P (EF-P) OB domain DEW08_04005 PF09285 Elongation factor P, C-terminal DEW08_04010 PF00459 Inositol monophosphatase family DEW08_04025 PF00691 OmpA family DEW08_04025 PF13677 Membrane MotB of proton-channel complex MotA/MotB DEW08_04030 PF03466 LysR substrate binding domain DEW08_04030 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family DEW08_04040 PF00266 Aminotransferase class-V DEW08_04045 PF02347 Glycine cleavage system P-protein DEW08_04050 PF01597 Glycine cleavage H-protein DEW08_04055 PF08669 Glycine cleavage T-protein C-terminal barrel domain DEW08_04055 PF01571 Aminomethyltransferase folate-binding domain DEW08_04065 PF02401 LytB protein DEW08_04070 PF01636 Phosphotransferase enzyme family DEW08_04075 PF00075 RNase H DEW08_04080 PF03459 TOBE domain DEW08_04085 PF03459 TOBE domain DEW08_04085 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family DEW08_04095 PF00528 Binding-protein-dependent transport system inner membrane component DEW08_04100 PF03459 TOBE domain DEW08_04100 PF00005 ABC transporter DEW08_04115 PF07733 Bacterial DNA polymerase III alpha NTPase domain DEW08_04115 PF14579 Helix-hairpin-helix motif DEW08_04115 PF02811 PHP domain DEW08_04115 PF17657 Bacterial DNA polymerase III alpha subunit finger domain DEW08_04130 PF10145 Phage-related minor tail protein DEW08_04130 PF01464 Transglycosylase SLT domain DEW08_04130 PF01551 Peptidase family M23 DEW08_04140 PF01553 Acyltransferase DEW08_04140 PF00501 AMP-binding enzyme DEW08_04160 PF00034 Cytochrome c DEW08_04165 PF07995 Glucose / Sorbosone dehydrogenase DEW08_04170 PF04461 Protein of unknown function (DUF520) DEW08_04180 PF08352 Oligopeptide/dipeptide transporter, C-terminal region DEW08_04180 PF00005 ABC transporter DEW08_04190 PF12911 N-terminal TM domain of oligopeptide transport permease C DEW08_04190 PF00528 Binding-protein-dependent transport system inner membrane component DEW08_04195 PF00528 Binding-protein-dependent transport system inner membrane component DEW08_04200 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle DEW08_04210 PF04794 YdjC-like protein DEW08_04215 PF13193 AMP-binding enzyme C-terminal domain DEW08_04215 PF00501 AMP-binding enzyme DEW08_04225 PF00072 Response regulator receiver domain DEW08_04230 PF01728 FtsJ-like methyltransferase DEW08_04230 PF01479 S4 domain DEW08_04235 PF07568 Histidine kinase DEW08_04235 PF13426 PAS domain DEW08_04235 PF13581 Histidine kinase-like ATPase domain DEW08_04240 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family DEW08_04240 PF03466 LysR substrate binding domain DEW08_04245 PF02798 Glutathione S-transferase, N-terminal domain DEW08_04255 PF07238 PilZ domain DEW08_04255 PF00069 Protein kinase domain DEW08_04305 PF00669 Bacterial flagellin N-terminal helical region DEW08_04305 PF00700 Bacterial flagellin C-terminal helical region DEW08_04310 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal DEW08_04310 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III DEW08_04330 PF00561 alpha/beta hydrolase fold DEW08_04330 PF00364 Biotin-requiring enzyme DEW08_04340 PF02348 Cytidylyltransferase DEW08_04345 PF03102 NeuB family DEW08_04345 PF08666 SAF domain DEW08_04370 PF12804 MobA-like NTP transferase domain DEW08_04370 PF00132 Bacterial transferase hexapeptide (six repeats) DEW08_04370 PF14602 Hexapeptide repeat of succinyl-transferase DEW08_04385 PF00390 Malic enzyme, N-terminal domain DEW08_04385 PF01515 Phosphate acetyl/butaryl transferase DEW08_04385 PF03949 Malic enzyme, NAD binding domain DEW08_04390 PF00375 Sodium:dicarboxylate symporter family DEW08_04395 PF02743 Cache domain DEW08_04395 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DEW08_04395 PF00512 His Kinase A (phospho-acceptor) domain DEW08_04400 PF00072 Response regulator receiver domain DEW08_04400 PF00158 Sigma-54 interaction domain DEW08_04400 PF02954 Bacterial regulatory protein, Fis family DEW08_04405 PF08534 Redoxin DEW08_04410 PF02683 Cytochrome C biogenesis protein transmembrane region DEW08_04410 PF11412 Disulphide bond corrector protein DsbC DEW08_04415 PF02622 Uncharacterized ACR, COG1678 DEW08_04420 PF02391 MoaE protein DEW08_04425 PF02597 ThiS family DEW08_04430 PF03454 MoeA C-terminal region (domain IV) DEW08_04430 PF03453 MoeA N-terminal region (domain I and II) DEW08_04430 PF00994 Probable molybdopterin binding domain DEW08_04435 PF13419 Haloacid dehalogenase-like hydrolase DEW08_04440 PF03205 Molybdopterin guanine dinucleotide synthesis protein B DEW08_04445 PF01066 CDP-alcohol phosphatidyltransferase DEW08_04450 PF01541 GIY-YIG catalytic domain DEW08_04450 PF12826 Helix-hairpin-helix motif DEW08_04450 PF02151 UvrB/uvrC motif DEW08_04450 PF08459 UvrC Helix-hairpin-helix N-terminal DEW08_04475 PF00004 ATPase family associated with various cellular activities (AAA) DEW08_04475 PF01434 Peptidase family M41 DEW08_04475 PF17862 AAA+ lid domain DEW08_04475 PF06480 FtsH Extracellular DEW08_04480 PF01171 PP-loop family DEW08_04490 PF00691 OmpA family DEW08_04495 PF07676 WD40-like Beta Propeller Repeat DEW08_04495 PF04052 TolB amino-terminal domain DEW08_04505 PF02472 Biopolymer transport protein ExbD/TolR DEW08_04510 PF01618 MotA/TolQ/ExbB proton channel family DEW08_04515 PF03061 Thioesterase superfamily DEW08_04520 PF05491 RuvB C-terminal winged helix domain DEW08_04520 PF05496 Holliday junction DNA helicase RuvB P-loop domain DEW08_04520 PF17864 RuvB AAA lid domain DEW08_04525 PF01330 RuvA N terminal domain DEW08_04525 PF07499 RuvA, C-terminal domain DEW08_04530 PF02075 Crossover junction endodeoxyribonuclease RuvC DEW08_04535 PF01709 Transcriptional regulator DEW08_04545 PF13277 YmdB-like protein DEW08_04550 PF01812 5-formyltetrahydrofolate cyclo-ligase family DEW08_04570 PF00456 Transketolase, thiamine diphosphate binding domain DEW08_04570 PF02780 Transketolase, C-terminal domain DEW08_04570 PF02779 Transketolase, pyrimidine binding domain DEW08_04575 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain DEW08_04575 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain DEW08_04580 PF17200 Single Cache domain 2 DEW08_04580 PF00672 HAMP domain DEW08_04580 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain DEW08_04600 PF01791 DeoC/LacD family aldolase DEW08_04605 PF02581 Thiamine monophosphate synthase DEW08_04625 PF02872 5'-nucleotidase, C-terminal domain DEW08_04625 PF00149 Calcineurin-like phosphoesterase DEW08_04650 PF00664 ABC transporter transmembrane region DEW08_04650 PF00005 ABC transporter DEW08_04655 PF01627 Hpt domain DEW08_04655 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DEW08_04655 PF17149 Periplasmic sensor domain found in signal transduction proteins DEW08_04655 PF00672 HAMP domain DEW08_04655 PF00072 Response regulator receiver domain DEW08_04655 PF00512 His Kinase A (phospho-acceptor) domain DEW08_04665 PF16177 Acetyl-coenzyme A synthetase N-terminus DEW08_04665 PF13193 AMP-binding enzyme C-terminal domain DEW08_04665 PF00501 AMP-binding enzyme DEW08_04705 PF03358 NADPH-dependent FMN reductase DEW08_04710 PF12833 Helix-turn-helix domain DEW08_04750 PF00535 Glycosyl transferase family 2 DEW08_04750 PF03552 Cellulose synthase DEW08_04750 PF07238 PilZ domain DEW08_04770 PF01384 Phosphate transporter family DEW08_04780 PF02547 Queuosine biosynthesis protein DEW08_04785 PF01702 Queuine tRNA-ribosyltransferase DEW08_04800 PF14489 QueF-like protein DEW08_04805 PF08331 Domain of unknown function (DUF1730) DEW08_04810 PF00501 AMP-binding enzyme DEW08_04810 PF13193 AMP-binding enzyme C-terminal domain DEW08_04825 PF16591 Helical bimodular sensor domain DEW08_04825 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain DEW08_04825 PF00672 HAMP domain DEW08_04840 PF01144 Coenzyme A transferase DEW08_04845 PF01144 Coenzyme A transferase DEW08_04855 PF03741 Integral membrane protein TerC family DEW08_04860 PF00216 Bacterial DNA-binding protein DEW08_04865 PF05443 ROS/MUCR transcriptional regulator protein DEW08_04875 PF04542 Sigma-70 region 2 DEW08_04875 PF04545 Sigma-70, region 4 DEW08_04875 PF00140 Sigma-70 factor, region 1.2 DEW08_04880 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain DEW08_04905 PF13302 Acetyltransferase (GNAT) domain DEW08_04910 PF00675 Insulinase (Peptidase family M16) DEW08_04910 PF05193 Peptidase M16 inactive domain DEW08_04915 PF00291 Pyridoxal-phosphate dependent enzyme DEW08_04915 PF14821 Threonine synthase N terminus DEW08_04925 PF02104 SURF1 family DEW08_04935 PF00510 Cytochrome c oxidase subunit III DEW08_04940 PF04442 Cytochrome c oxidase assembly protein CtaG/Cox11 DEW08_04945 PF01040 UbiA prenyltransferase family DEW08_04950 PF00115 Cytochrome C and Quinol oxidase polypeptide I DEW08_04955 PF02790 Cytochrome C oxidase subunit II, transmembrane domain DEW08_04955 PF00116 Cytochrome C oxidase subunit II, periplasmic domain DEW08_04965 PF01523 Putative modulator of DNA gyrase DEW08_04980 PF06082 Exopolysaccharide biosynthesis protein YbjH DEW08_04990 PF07043 Protein of unknown function (DUF1328) DEW08_04995 PF04542 Sigma-70 region 2 DEW08_04995 PF08281 Sigma-70, region 4 DEW08_05000 PF01551 Peptidase family M23 DEW08_05000 PF10145 Phage-related minor tail protein DEW08_05000 PF01464 Transglycosylase SLT domain DEW08_05005 PF00561 alpha/beta hydrolase fold DEW08_05020 PF01209 ubiE/COQ5 methyltransferase family DEW08_05035 PF17243 POTRA domain TamA domain 1 DEW08_05035 PF07244 Surface antigen variable number repeat DEW08_05035 PF01103 Surface antigen DEW08_05055 PF08402 TOBE domain DEW08_05055 PF00005 ABC transporter DEW08_05080 PF02566 OsmC-like protein DEW08_05085 PF01047 MarR family DEW08_05105 PF03738 Glutathionylspermidine synthase preATP-grasp DEW08_05110 PF12867 DinB superfamily DEW08_05110 PF03781 Sulfatase-modifying factor enzyme 1 DEW08_05125 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain DEW08_05125 PF07992 Pyridine nucleotide-disulphide oxidoreductase DEW08_05130 PF05067 Manganese containing catalase DEW08_05135 PF07690 Major Facilitator Superfamily DEW08_05140 PF01474 Class-II DAHP synthetase family DEW08_05150 PF01966 HD domain DEW08_05150 PF00672 HAMP domain DEW08_05155 PF03600 Citrate transporter DEW08_05160 PF00753 Metallo-beta-lactamase superfamily DEW08_05160 PF12706 Beta-lactamase superfamily domain DEW08_05165 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain DEW08_05165 PF00672 HAMP domain DEW08_05170 PF16916 Dimerisation domain of Zinc Transporter DEW08_05170 PF01545 Cation efflux family DEW08_05175 PF01243 Pyridoxamine 5'-phosphate oxidase DEW08_05175 PF10590 Pyridoxine 5'-phosphate oxidase C-terminal dimerisation region DEW08_05180 PF05433 Glycine zipper 2TM domain DEW08_05180 PF16998 17 kDa outer membrane surface antigen DEW08_05185 PF00226 DnaJ domain DEW08_05185 PF01556 DnaJ C terminal domain DEW08_05190 PF03631 Virulence factor BrkB DEW08_05205 PF01264 Chorismate synthase DEW08_05220 PF01343 Peptidase family S49 DEW08_05225 PF08448 PAS fold DEW08_05225 PF03705 CheR methyltransferase, all-alpha domain DEW08_05225 PF01739 CheR methyltransferase, SAM binding domain DEW08_05225 PF01339 CheB methylesterase DEW08_05230 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DEW08_05230 PF00512 His Kinase A (phospho-acceptor) domain DEW08_05235 PF03649 Uncharacterised protein family (UPF0014) DEW08_05240 PF00005 ABC transporter DEW08_05245 PF07690 Major Facilitator Superfamily DEW08_05250 PF01594 AI-2E family transporter DEW08_05260 PF03706 Lysylphosphatidylglycerol synthase TM region DEW08_05265 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family DEW08_05265 PF03466 LysR substrate binding domain DEW08_05270 PF01155 Hydrogenase/urease nickel incorporation, metallochaperone, hypA DEW08_05275 PF00384 Molybdopterin oxidoreductase DEW08_05275 PF01568 Molydopterin dinucleotide binding domain DEW08_05275 PF04879 Molybdopterin oxidoreductase Fe4S4 domain DEW08_05280 PF13247 4Fe-4S dicluster domain DEW08_05280 PF12800 4Fe-4S binding domain DEW08_05285 PF00037 4Fe-4S binding domain DEW08_05285 PF12798 4Fe-4S binding domain DEW08_05295 PF00146 NADH dehydrogenase DEW08_05300 PF00361 Proton-conducting membrane transporter DEW08_05300 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus DEW08_05310 PF00361 Proton-conducting membrane transporter DEW08_05310 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus DEW08_05315 PF00329 Respiratory-chain NADH dehydrogenase, 30 Kd subunit DEW08_05315 PF00374 Nickel-dependent hydrogenase DEW08_05315 PF00346 Respiratory-chain NADH dehydrogenase, 49 Kd subunit DEW08_05325 PF01058 NADH ubiquinone oxidoreductase, 20 Kd subunit DEW08_05330 PF07450 Formate hydrogenlyase maturation protein HycH DEW08_05335 PF01750 Hydrogenase maturation protease DEW08_05340 PF01226 Formate/nitrite transporter DEW08_05345 PF04055 Radical SAM superfamily DEW08_05345 PF06463 Molybdenum Cofactor Synthesis C DEW08_05350 PF02634 FdhD/NarQ family DEW08_05355 PF01155 Hydrogenase/urease nickel incorporation, metallochaperone, hypA DEW08_05360 PF02492 CobW/HypB/UreG, nucleotide-binding domain DEW08_05365 PF01455 HupF/HypC family DEW08_05370 PF01924 Hydrogenase formation hypA family DEW08_05375 PF00586 AIR synthase related protein, N-terminal domain DEW08_05375 PF02769 AIR synthase related protein, C-terminal domain DEW08_05380 PF04955 HupE / UreJ protein DEW08_05395 PF01037 Lrp/AsnC ligand binding domain DEW08_05400 PF00291 Pyridoxal-phosphate dependent enzyme DEW08_05410 PF05661 Protein of unknown function (DUF808) DEW08_05420 PF11849 Domain of unknown function (DUF3369) DEW08_05435 PF04024 PspC domain DEW08_05445 PF04012 PspA/IM30 family DEW08_05450 PF00158 Sigma-54 interaction domain DEW08_05450 PF02954 Bacterial regulatory protein, Fis family DEW08_05460 PF00912 Transglycosylase DEW08_05460 PF00905 Penicillin binding protein transpeptidase domain DEW08_05475 PF07992 Pyridine nucleotide-disulphide oxidoreductase DEW08_05485 PF00313 'Cold-shock' DNA-binding domain DEW08_05510 PF01022 Bacterial regulatory protein, arsR family DEW08_05515 PF03773 Predicted permease DEW08_05545 PF00664 ABC transporter transmembrane region DEW08_05545 PF00005 ABC transporter DEW08_05550 PF00529 HlyD membrane-fusion protein of T1SS DEW08_05585 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle DEW08_05590 PF00528 Binding-protein-dependent transport system inner membrane component DEW08_05595 PF12911 N-terminal TM domain of oligopeptide transport permease C DEW08_05595 PF00528 Binding-protein-dependent transport system inner membrane component DEW08_05615 PF00378 Enoyl-CoA hydratase/isomerase DEW08_05615 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain DEW08_05615 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain DEW08_05620 PF00108 Thiolase, N-terminal domain DEW08_05620 PF02803 Thiolase, C-terminal domain DEW08_05625 PF00441 Acyl-CoA dehydrogenase, C-terminal domain DEW08_05625 PF02770 Acyl-CoA dehydrogenase, middle domain DEW08_05625 PF02771 Acyl-CoA dehydrogenase, N-terminal domain DEW08_05630 PF00441 Acyl-CoA dehydrogenase, C-terminal domain DEW08_05630 PF02770 Acyl-CoA dehydrogenase, middle domain DEW08_05630 PF02771 Acyl-CoA dehydrogenase, N-terminal domain DEW08_05675 PF00027 Cyclic nucleotide-binding domain DEW08_05675 PF00005 ABC transporter DEW08_05690 PF07690 Major Facilitator Superfamily DEW08_05695 PF00072 Response regulator receiver domain DEW08_05695 PF00497 Bacterial extracellular solute-binding proteins, family 3 DEW08_05695 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DEW08_05695 PF00512 His Kinase A (phospho-acceptor) domain DEW08_05695 PF01627 Hpt domain DEW08_05695 PF00989 PAS fold DEW08_05705 PF00072 Response regulator receiver domain DEW08_05705 PF00196 Bacterial regulatory proteins, luxR family DEW08_05710 PF09339 IclR helix-turn-helix domain DEW08_05715 PF00378 Enoyl-CoA hydratase/isomerase DEW08_05720 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain DEW08_05720 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain DEW08_05720 PF18321 3-hydroxybutyryl-CoA dehydrogenase reduced Rossmann-fold domain DEW08_05725 PF00005 ABC transporter DEW08_05730 PF00528 Binding-protein-dependent transport system inner membrane component DEW08_05735 PF09084 NMT1/THI5 like DEW08_05740 PF01546 Peptidase family M20/M25/M40 DEW08_05740 PF07687 Peptidase dimerisation domain DEW08_05745 PF00465 Iron-containing alcohol dehydrogenase DEW08_05745 PF00171 Aldehyde dehydrogenase family DEW08_05750 PF00392 Bacterial regulatory proteins, gntR family DEW08_05750 PF07729 FCD domain DEW08_05760 PF02754 Cysteine-rich domain DEW08_05765 PF02589 LUD domain DEW08_05765 PF13183 4Fe-4S dicluster domain DEW08_05765 PF11870 Domain of unknown function (DUF3390) DEW08_05770 PF02589 LUD domain DEW08_05775 PF08240 Alcohol dehydrogenase GroES-like domain DEW08_05775 PF13823 Alcohol dehydrogenase GroES-associated DEW08_05775 PF00107 Zinc-binding dehydrogenase DEW08_05790 PF02472 Biopolymer transport protein ExbD/TolR DEW08_05795 PF01618 MotA/TolQ/ExbB proton channel family DEW08_05800 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain DEW08_05800 PF00672 HAMP domain DEW08_05800 PF12729 Four helix bundle sensory module for signal transduction DEW08_05805 PF00072 Response regulator receiver domain DEW08_05805 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DEW08_05805 PF01627 Hpt domain DEW08_05805 PF00512 His Kinase A (phospho-acceptor) domain DEW08_05815 PF00072 Response regulator receiver domain DEW08_05815 PF00196 Bacterial regulatory proteins, luxR family DEW08_05820 PF00072 Response regulator receiver domain DEW08_05825 PF00072 Response regulator receiver domain DEW08_05850 PF08241 Methyltransferase domain DEW08_05855 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DEW08_05855 PF00512 His Kinase A (phospho-acceptor) domain DEW08_05860 PF02954 Bacterial regulatory protein, Fis family DEW08_05860 PF00072 Response regulator receiver domain DEW08_05860 PF00158 Sigma-54 interaction domain DEW08_05865 PF13567 Domain of unknown function (DUF4131) DEW08_05865 PF03772 Competence protein DEW08_05865 PF00753 Metallo-beta-lactamase superfamily DEW08_05870 PF00749 tRNA synthetases class I (E and Q), catalytic domain DEW08_05875 PF00285 Citrate synthase, C-terminal domain DEW08_05890 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily DEW08_05895 PF02684 Lipid-A-disaccharide synthetase DEW08_05900 PF06230 LpxI C-terminal domain DEW08_05900 PF17930 LpxI N-terminal domain DEW08_05905 PF00132 Bacterial transferase hexapeptide (six repeats) DEW08_05905 PF13720 Udp N-acetylglucosamine O-acyltransferase; Domain 2 DEW08_05910 PF07977 FabA-like domain DEW08_05920 PF01103 Surface antigen DEW08_05920 PF07244 Surface antigen variable number repeat DEW08_05930 PF13288 DXP reductoisomerase C-terminal domain DEW08_05930 PF02670 1-deoxy-D-xylulose 5-phosphate reductoisomerase DEW08_05930 PF08436 1-deoxy-D-xylulose 5-phosphate reductoisomerase C-terminal domain DEW08_05940 PF01255 Putative undecaprenyl diphosphate synthase DEW08_05945 PF01765 Ribosome recycling factor DEW08_05950 PF00696 Amino acid kinase family DEW08_05955 PF00889 Elongation factor TS DEW08_05960 PF00318 Ribosomal protein S2 DEW08_05965 PF14579 Helix-hairpin-helix motif DEW08_05965 PF07733 Bacterial DNA polymerase III alpha NTPase domain DEW08_05965 PF17657 Bacterial DNA polymerase III alpha subunit finger domain DEW08_05965 PF02811 PHP domain DEW08_05975 PF05922 Peptidase inhibitor I9 DEW08_05975 PF00082 Subtilase family DEW08_05995 PF00892 EamA-like transporter family DEW08_06000 PF01738 Dienelactone hydrolase family DEW08_06005 PF00005 ABC transporter DEW08_06010 PF12704 MacB-like periplasmic core domain DEW08_06010 PF02687 FtsX-like permease family DEW08_06015 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) DEW08_06015 PF03129 Anticodon binding domain DEW08_06030 PF03352 Methyladenine glycosylase DEW08_06030 PF00958 GMP synthase C terminal domain DEW08_06030 PF00117 Glutamine amidotransferase class-I DEW08_06030 PF13302 Acetyltransferase (GNAT) domain DEW08_06030 PF13673 Acetyltransferase (GNAT) domain DEW08_06040 PF12706 Beta-lactamase superfamily domain DEW08_06040 PF07521 Zn-dependent metallo-hydrolase RNA specificity domain DEW08_06040 PF17770 Ribonuclease J C-terminal domain DEW08_06045 PF03309 Type III pantothenate kinase DEW08_06050 PF02237 Biotin protein ligase C terminal domain DEW08_06050 PF03099 Biotin/lipoate A/B protein ligase family DEW08_06055 PF00361 Proton-conducting membrane transporter DEW08_06060 PF00361 Proton-conducting membrane transporter DEW08_06060 PF01059 NADH-ubiquinone oxidoreductase chain 4, amino terminus DEW08_06070 PF01649 Ribosomal protein S20 DEW08_06075 PF00378 Enoyl-CoA hydratase/isomerase DEW08_06085 PF06831 Formamidopyrimidine-DNA glycosylase H2TH domain DEW08_06085 PF01149 Formamidopyrimidine-DNA glycosylase N-terminal domain DEW08_06090 PF01209 ubiE/COQ5 methyltransferase family DEW08_06095 PF03109 ABC1 family DEW08_06110 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases DEW08_06115 PF02021 Uncharacterised protein family UPF0102 DEW08_06120 PF13369 Transglutaminase-like superfamily DEW08_06125 PF02951 Prokaryotic glutathione synthetase, N-terminal domain DEW08_06125 PF02955 Prokaryotic glutathione synthetase, ATP-grasp domain DEW08_06145 PF02589 LUD domain DEW08_06150 PF02589 LUD domain DEW08_06150 PF11870 Domain of unknown function (DUF3390) DEW08_06150 PF13183 4Fe-4S dicluster domain DEW08_06155 PF02754 Cysteine-rich domain DEW08_06165 PF01204 Trehalase DEW08_06170 PF00691 OmpA family DEW08_06170 PF01389 OmpA-like transmembrane domain DEW08_06175 PF03480 Bacterial extracellular solute-binding protein, family 7 DEW08_06180 PF04290 Tripartite ATP-independent periplasmic transporters, DctQ component DEW08_06185 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component DEW08_06205 PF07690 Major Facilitator Superfamily DEW08_06260 PF13302 Acetyltransferase (GNAT) domain DEW08_06265 PF01960 ArgJ family DEW08_06285 PF05974 Domain of unknown function (DUF892) DEW08_06300 PF00156 Phosphoribosyl transferase domain DEW08_06315 PF00528 Binding-protein-dependent transport system inner membrane component DEW08_06320 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle DEW08_06325 PF01470 Pyroglutamyl peptidase DEW08_06330 PF00579 tRNA synthetases class I (W and Y) DEW08_06340 PF15731 Antitoxin component of bacterial toxin-antitoxin system, MqsA DEW08_06350 PF00691 OmpA family DEW08_06365 PF04073 Aminoacyl-tRNA editing domain DEW08_06375 PF01227 GTP cyclohydrolase I DEW08_06380 PF04379 ApaG domain DEW08_06430 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DEW08_06430 PF00512 His Kinase A (phospho-acceptor) domain DEW08_06430 PF00072 Response regulator receiver domain DEW08_06430 PF09456 RcsC Alpha-Beta-Loop (ABL) DEW08_06440 PF13426 PAS domain DEW08_06440 PF13581 Histidine kinase-like ATPase domain DEW08_06440 PF07536 HWE histidine kinase DEW08_06445 PF00672 HAMP domain DEW08_06445 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain DEW08_06445 PF17202 Single cache domain 3 DEW08_06465 PF00990 Diguanylate cyclase, GGDEF domain DEW08_06465 PF05230 MASE2 domain DEW08_06470 PF02195 ParB-like nuclease domain DEW08_06470 PF17762 HTH domain found in ParB protein DEW08_06485 PF00672 HAMP domain DEW08_06485 PF16591 Helical bimodular sensor domain DEW08_06485 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain DEW08_06500 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain DEW08_06500 PF00672 HAMP domain DEW08_06505 PF01381 Helix-turn-helix DEW08_06510 PF01381 Helix-turn-helix DEW08_06520 PF08447 PAS fold DEW08_06520 PF00563 EAL domain DEW08_06520 PF08448 PAS fold DEW08_06520 PF00990 Diguanylate cyclase, GGDEF domain DEW08_06525 PF05443 ROS/MUCR transcriptional regulator protein DEW08_06530 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DEW08_06530 PF01584 CheW-like domain DEW08_06530 PF00072 Response regulator receiver domain DEW08_06530 PF01627 Hpt domain DEW08_06540 PF00072 Response regulator receiver domain DEW08_06540 PF00486 Transcriptional regulatory protein, C terminal DEW08_06545 PF00512 His Kinase A (phospho-acceptor) domain DEW08_06545 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DEW08_06545 PF18415 Histidine kinase receptor ArcB trans-membrane domain DEW08_06545 PF01627 Hpt domain DEW08_06545 PF00989 PAS fold DEW08_06545 PF00072 Response regulator receiver domain DEW08_06550 PF00072 Response regulator receiver domain DEW08_06565 PF01555 DNA methylase DEW08_06610 PF05717 IS66 Orf2 like protein DEW08_06615 PF03050 Transposase IS66 family DEW08_06615 PF13007 Transposase C of IS166 homeodomain DEW08_06615 PF13005 zinc-finger binding domain of transposase IS66 DEW08_06615 PF13817 IS66 C-terminal element DEW08_06620 PF02899 Phage integrase, N-terminal SAM-like domain DEW08_06620 PF00589 Phage integrase family DEW08_06625 PF00589 Phage integrase family DEW08_06645 PF02954 Bacterial regulatory protein, Fis family DEW08_06645 PF00072 Response regulator receiver domain DEW08_06645 PF00158 Sigma-54 interaction domain DEW08_06655 PF00672 HAMP domain DEW08_06655 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain DEW08_06655 PF17200 Single Cache domain 2 DEW08_06665 PF00072 Response regulator receiver domain DEW08_06665 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DEW08_06665 PF13426 PAS domain DEW08_06705 PF00872 Transposase, Mutator family DEW08_06710 PF08401 Domain of unknown function (DUF1738) DEW08_06710 PF18818 Metallopeptidase superfamily domain DEW08_06745 PF13614 AAA domain DEW08_06765 PF00437 Type II/IV secretion system protein DEW08_06820 PF00892 EamA-like transporter family DEW08_06835 PF04545 Sigma-70, region 4 DEW08_06835 PF00140 Sigma-70 factor, region 1.2 DEW08_06835 PF04542 Sigma-70 region 2 DEW08_06840 PF00011 Hsp20/alpha crystallin family DEW08_06845 PF00011 Hsp20/alpha crystallin family DEW08_06865 PF00004 ATPase family associated with various cellular activities (AAA) DEW08_06865 PF17862 AAA+ lid domain DEW08_06865 PF06480 FtsH Extracellular DEW08_06865 PF01434 Peptidase family M41 DEW08_06880 PF00034 Cytochrome c DEW08_06890 PF09125 Cytochrome C oxidase subunit II, transmembrane DEW08_06890 PF00116 Cytochrome C oxidase subunit II, periplasmic domain DEW08_06930 PF08335 GlnD PII-uridylyltransferase DEW08_06930 PF01966 HD domain DEW08_06930 PF01909 Nucleotidyltransferase domain DEW08_06935 PF00072 Response regulator receiver domain DEW08_06935 PF09456 RcsC Alpha-Beta-Loop (ABL) DEW08_06935 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DEW08_06935 PF00512 His Kinase A (phospho-acceptor) domain DEW08_06940 PF03023 Lipid II flippase MurJ DEW08_06945 PF01053 Cys/Met metabolism PLP-dependent enzyme DEW08_06955 PF02866 lactate/malate dehydrogenase, alpha/beta C-terminal domain DEW08_06955 PF00056 lactate/malate dehydrogenase, NAD binding domain DEW08_06960 PF00583 Acetyltransferase (GNAT) family DEW08_06960 PF13607 Succinyl-CoA ligase like flavodoxin domain DEW08_06960 PF13380 CoA binding domain DEW08_06965 PF05685 Putative restriction endonuclease DEW08_06970 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain DEW08_06970 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain DEW08_06995 PF02915 Rubrerythrin DEW08_07015 PF12544 Lysine-2,3-aminomutase DEW08_07015 PF04055 Radical SAM superfamily DEW08_07025 PF06725 3D domain DEW08_07025 PF03562 MltA specific insert domain DEW08_07030 PF04280 Tim44-like domain DEW08_07035 PF04186 FxsA cytoplasmic membrane protein DEW08_07040 PF02556 Preprotein translocase subunit SecB DEW08_07045 PF07498 Rho termination factor, N-terminal domain DEW08_07045 PF07497 Rho termination factor, RNA-binding domain DEW08_07045 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain DEW08_07055 PF00762 Ferrochelatase DEW08_07060 PF01208 Uroporphyrinogen decarboxylase (URO-D) DEW08_07065 PF03618 Kinase/pyrophosphorylase DEW08_07070 PF02545 Maf-like protein DEW08_07075 PF18317 Shikimate 5'-dehydrogenase C-terminal domain DEW08_07075 PF01488 Shikimate / quinate 5-dehydrogenase DEW08_07075 PF08501 Shikimate dehydrogenase substrate binding domain DEW08_07080 PF01121 Dephospho-CoA kinase DEW08_07085 PF00929 Exonuclease DEW08_07090 PF00107 Zinc-binding dehydrogenase DEW08_07090 PF08240 Alcohol dehydrogenase GroES-like domain DEW08_07095 PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain DEW08_07095 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain DEW08_07115 PF10396 GTP-binding protein TrmE N-terminus DEW08_07115 PF12631 MnmE helical domain DEW08_07115 PF01926 50S ribosome-binding GTPase DEW08_07125 PF02527 rRNA small subunit methyltransferase G DEW08_07135 PF02195 ParB-like nuclease domain DEW08_07135 PF17762 HTH domain found in ParB protein DEW08_07155 PF13603 Leucyl-tRNA synthetase, Domain 2 DEW08_07155 PF08264 Anticodon-binding domain of tRNA DEW08_07155 PF00133 tRNA synthetases class I (I, L, M and V) DEW08_07160 PF12100 Domain of unknown function (DUF3576) DEW08_07165 PF13609 Gram-negative porin DEW08_07170 PF13609 Gram-negative porin DEW08_07195 PF00925 GTP cyclohydrolase II DEW08_07205 PF00072 Response regulator receiver domain DEW08_07205 PF00486 Transcriptional regulatory protein, C terminal DEW08_07220 PF05230 MASE2 domain DEW08_07220 PF00990 Diguanylate cyclase, GGDEF domain DEW08_07225 PF00300 Histidine phosphatase superfamily (branch 1) DEW08_07235 PF03372 Endonuclease/Exonuclease/phosphatase family DEW08_07240 PF01557 Fumarylacetoacetate (FAA) hydrolase family DEW08_07245 PF12802 MarR family DEW08_07250 PF07722 Peptidase C26 DEW08_07260 PF01580 FtsK/SpoIIIE family DEW08_07260 PF13491 4TM region of DNA translocase FtsK/SpoIIIE DEW08_07260 PF17854 FtsK alpha domain DEW08_07265 PF00155 Aminotransferase class I and II DEW08_07270 PF00543 Nitrogen regulatory protein P-II DEW08_07275 PF01494 FAD binding domain DEW08_07285 PF02834 LigT like Phosphoesterase DEW08_07290 PF00248 Aldo/keto reductase family DEW08_07300 PF13472 GDSL-like Lipase/Acylhydrolase family DEW08_07305 PF00005 ABC transporter DEW08_07310 PF00005 ABC transporter DEW08_07310 PF02687 FtsX-like permease family DEW08_07310 PF12704 MacB-like periplasmic core domain DEW08_07315 PF01027 Inhibitor of apoptosis-promoting Bax1 DEW08_07325 PF01348 Type II intron maturase DEW08_07325 PF00078 Reverse transcriptase (RNA-dependent DNA polymerase) DEW08_07330 PF17151 Periplasmic sensor domain DEW08_07330 PF00990 Diguanylate cyclase, GGDEF domain DEW08_07335 PF00684 DnaJ central domain DEW08_07335 PF00226 DnaJ domain DEW08_07335 PF01556 DnaJ C terminal domain DEW08_07340 PF00012 Hsp70 protein DEW08_07360 PF00072 Response regulator receiver domain DEW08_07365 PF01025 GrpE DEW08_07370 PF01628 HrcA protein C terminal domain DEW08_07375 PF01138 3' exoribonuclease family, domain 1 DEW08_07375 PF03725 3' exoribonuclease family, domain 2 DEW08_07380 PF01725 Ham1 family DEW08_07385 PF04055 Radical SAM superfamily DEW08_07385 PF06969 HemN C-terminal domain DEW08_07390 PF00186 Dihydrofolate reductase DEW08_07395 PF07724 AAA domain (Cdc48 subfamily) DEW08_07395 PF10431 C-terminal, D2-small domain, of ClpB protein DEW08_07395 PF00004 ATPase family associated with various cellular activities (AAA) DEW08_07400 PF00227 Proteasome subunit DEW08_07415 PF00475 Imidazoleglycerol-phosphate dehydratase DEW08_07420 PF00117 Glutamine amidotransferase class-I DEW08_07425 PF00583 Acetyltransferase (GNAT) family DEW08_07430 PF00977 Histidine biosynthesis protein DEW08_07435 PF00977 Histidine biosynthesis protein DEW08_07440 PF01503 Phosphoribosyl-ATP pyrophosphohydrolase DEW08_07445 PF01230 HIT domain DEW08_07450 PF00950 ABC 3 transport family DEW08_07455 PF00005 ABC transporter DEW08_07460 PF01297 Zinc-uptake complex component A periplasmic DEW08_07465 PF01113 Dihydrodipicolinate reductase, N-terminus DEW08_07465 PF05173 Dihydrodipicolinate reductase, C-terminus DEW08_07470 PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain DEW08_07470 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain DEW08_07490 PF00561 alpha/beta hydrolase fold DEW08_07505 PF00109 Beta-ketoacyl synthase, N-terminal domain DEW08_07505 PF02801 Beta-ketoacyl synthase, C-terminal domain DEW08_07510 PF01638 HxlR-like helix-turn-helix DEW08_07515 PF00294 pfkB family carbohydrate kinase DEW08_07520 PF01925 Sulfite exporter TauE/SafE DEW08_07545 PF00211 Adenylate and Guanylate cyclase catalytic domain DEW08_07545 PF00672 HAMP domain DEW08_07550 PF01106 NifU-like domain DEW08_07560 PF00814 Glycoprotease family DEW08_07565 PF00583 Acetyltransferase (GNAT) family DEW08_07575 PF05443 ROS/MUCR transcriptional regulator protein DEW08_07590 PF03928 Haem-degrading DEW08_07600 PF02562 PhoH-like protein DEW08_07605 PF02130 Uncharacterized protein family UPF0054 DEW08_07610 PF00571 CBS domain DEW08_07610 PF03471 Transporter associated domain DEW08_07615 PF00795 Carbon-nitrogen hydrolase DEW08_07620 PF01381 Helix-turn-helix DEW08_07630 PF02390 Putative methyltransferase DEW08_07635 PF17384 RimP C-terminal SH3 domain DEW08_07635 PF02576 RimP N-terminal domain DEW08_07640 PF08529 NusA N-terminal domain DEW08_07640 PF00575 S1 RNA binding domain DEW08_07640 PF13184 NusA-like KH domain DEW08_07650 PF04760 Translation initiation factor IF-2, N-terminal region DEW08_07650 PF08364 Bacterial translation initiation factor IF-2 associated region DEW08_07650 PF11987 Translation-initiation factor 2 DEW08_07650 PF03144 Elongation factor Tu domain 2 DEW08_07650 PF00009 Elongation factor Tu GTP binding domain DEW08_07665 PF02033 Ribosome-binding factor A DEW08_07670 PF01509 TruB family pseudouridylate synthase (N terminal domain) DEW08_07670 PF16198 tRNA pseudouridylate synthase B C-terminal domain DEW08_07675 PF00312 Ribosomal protein S15 DEW08_07685 PF00013 KH domain DEW08_07685 PF03726 Polyribonucleotide nucleotidyltransferase, RNA binding domain DEW08_07685 PF01138 3' exoribonuclease family, domain 1 DEW08_07685 PF03725 3' exoribonuclease family, domain 2 DEW08_07685 PF00575 S1 RNA binding domain DEW08_07695 PF17149 Periplasmic sensor domain found in signal transduction proteins DEW08_07695 PF00672 HAMP domain DEW08_07695 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DEW08_07695 PF00512 His Kinase A (phospho-acceptor) domain DEW08_07695 PF00072 Response regulator receiver domain DEW08_07695 PF01627 Hpt domain DEW08_07700 PF02798 Glutathione S-transferase, N-terminal domain DEW08_07700 PF14497 Glutathione S-transferase, C-terminal domain DEW08_07710 PF00005 ABC transporter DEW08_07715 PF12399 Branched-chain amino acid ATP-binding cassette transporter DEW08_07715 PF00005 ABC transporter DEW08_07720 PF02653 Branched-chain amino acid transport system / permease component DEW08_07720 PF11862 Domain of unknown function (DUF3382) DEW08_07725 PF02653 Branched-chain amino acid transport system / permease component DEW08_07730 PF13458 Periplasmic binding protein DEW08_07735 PF07848 PaaX-like protein DEW08_07735 PF08223 PaaX-like protein C-terminal domain DEW08_07745 PF00970 Oxidoreductase FAD-binding domain DEW08_07745 PF00175 Oxidoreductase NAD-binding domain DEW08_07745 PF00111 2Fe-2S iron-sulfur cluster binding domain DEW08_07765 PF04209 homogentisate 1,2-dioxygenase DEW08_07775 PF00132 Bacterial transferase hexapeptide (six repeats) DEW08_07780 PF01494 FAD binding domain DEW08_07790 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle DEW08_07805 PF00474 Sodium:solute symporter family DEW08_07810 PF04341 Protein of unknown function, DUF485 DEW08_07825 PF00795 Carbon-nitrogen hydrolase DEW08_07830 PF00462 Glutaredoxin DEW08_07835 PF00156 Phosphoribosyl transferase domain DEW08_07840 PF01313 Bacterial export proteins, family 3 DEW08_07845 PF08241 Methyltransferase domain DEW08_07865 PF03186 CobD/Cbib protein DEW08_07870 PF00271 Helicase conserved C-terminal domain DEW08_07870 PF00270 DEAD/DEAH box helicase DEW08_07880 PF01741 Large-conductance mechanosensitive channel, MscL DEW08_07895 PF01043 SecA preprotein cross-linking domain DEW08_07895 PF02810 SEC-C motif DEW08_07895 PF07516 SecA Wing and Scaffold domain DEW08_07895 PF07517 SecA DEAD-like domain DEW08_07900 PF00291 Pyridoxal-phosphate dependent enzyme DEW08_07905 PF00290 Tryptophan synthase alpha chain DEW08_07910 PF01039 Carboxyl transferase domain DEW08_07910 PF17848 Acetyl-coA carboxylase zinc finger domain DEW08_07915 PF02875 Mur ligase family, glutamate ligase domain DEW08_07915 PF08245 Mur ligase middle domain DEW08_07940 PF01751 Toprim domain DEW08_07940 PF00986 DNA gyrase B subunit, carboxyl terminus DEW08_07940 PF00204 DNA gyrase B DEW08_07940 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DEW08_07945 PF02463 RecF/RecN/SMC N terminal domain DEW08_07950 PF00712 DNA polymerase III beta subunit, N-terminal domain DEW08_07950 PF02767 DNA polymerase III beta subunit, central domain DEW08_07950 PF02768 DNA polymerase III beta subunit, C-terminal domain DEW08_07975 PF13417 Glutathione S-transferase, N-terminal domain DEW08_07975 PF00043 Glutathione S-transferase, C-terminal domain DEW08_07980 PF00958 GMP synthase C terminal domain DEW08_07980 PF00117 Glutamine amidotransferase class-I DEW08_07980 PF03352 Methyladenine glycosylase DEW08_07980 PF13673 Acetyltransferase (GNAT) domain DEW08_07980 PF13302 Acetyltransferase (GNAT) domain DEW08_07990 PF07992 Pyridine nucleotide-disulphide oxidoreductase DEW08_07990 PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster DEW08_07995 PF02673 Bacitracin resistance protein BacA DEW08_08000 PF07690 Major Facilitator Superfamily DEW08_08005 PF04321 RmlD substrate binding domain DEW08_08015 PF00570 HRDC domain DEW08_08015 PF01612 3'-5' exonuclease DEW08_08020 PF01380 SIS domain DEW08_08020 PF00571 CBS domain DEW08_08035 PF00005 ABC transporter DEW08_08040 PF00309 Sigma-54 factor, Activator interacting domain (AID) DEW08_08040 PF04552 Sigma-54, DNA binding domain DEW08_08040 PF04963 Sigma-54 factor, core binding domain DEW08_08045 PF16321 Sigma 54 modulation/S30EA ribosomal protein C terminus DEW08_08045 PF02482 Sigma 54 modulation protein / S30EA ribosomal protein DEW08_08050 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 DEW08_08055 PF08241 Methyltransferase domain DEW08_08060 PF13840 ACT domain DEW08_08060 PF00696 Amino acid kinase family DEW08_08060 PF01842 ACT domain DEW08_08065 PF03060 Nitronate monooxygenase DEW08_08070 PF02896 PEP-utilising enzyme, TIM barrel domain DEW08_08070 PF00391 PEP-utilising enzyme, mobile domain DEW08_08070 PF05524 PEP-utilising enzyme, N-terminal DEW08_08070 PF01590 GAF domain DEW08_08075 PF00180 Isocitrate/isopropylmalate dehydrogenase DEW08_08075 PF18324 Hypothetical protein TT1725 DEW08_08080 PF04551 GcpE protein DEW08_08085 PF00745 Glutamyl-tRNAGlu reductase, dimerisation domain DEW08_08085 PF01488 Shikimate / quinate 5-dehydrogenase DEW08_08085 PF05201 Glutamyl-tRNAGlu reductase, N-terminal domain DEW08_08090 PF03462 PCRF domain DEW08_08090 PF00472 RF-1 domain DEW08_08095 PF13847 Methyltransferase domain DEW08_08095 PF17827 PrmC N-terminal domain DEW08_08115 PF00004 ATPase family associated with various cellular activities (AAA) DEW08_08115 PF02861 Clp amino terminal domain, pathogenicity island component DEW08_08115 PF07724 AAA domain (Cdc48 subfamily) DEW08_08115 PF17871 AAA lid domain DEW08_08115 PF10431 C-terminal, D2-small domain, of ClpB protein DEW08_08120 PF06906 Protein of unknown function (DUF1272) DEW08_08130 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain DEW08_08130 PF00672 HAMP domain DEW08_08130 PF02203 Tar ligand binding domain homologue DEW08_08135 PF00664 ABC transporter transmembrane region DEW08_08135 PF00005 ABC transporter DEW08_08155 PF00830 Ribosomal L28 family DEW08_08160 PF02631 RecX family DEW08_08165 PF01061 ABC-2 type transporter DEW08_08170 PF00202 Aminotransferase class-III DEW08_08175 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain DEW08_08175 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain DEW08_08180 PF01430 Hsp33 protein DEW08_08190 PF00670 S-adenosyl-L-homocysteine hydrolase, NAD binding domain DEW08_08190 PF05221 S-adenosyl-L-homocysteine hydrolase DEW08_08200 PF02896 PEP-utilising enzyme, TIM barrel domain DEW08_08200 PF00391 PEP-utilising enzyme, mobile domain DEW08_08200 PF05524 PEP-utilising enzyme, N-terminal DEW08_08205 PF00381 PTS HPr component phosphorylation site DEW08_08210 PF03830 PTS system sorbose subfamily IIB component DEW08_08210 PF03610 PTS system fructose IIA component DEW08_08220 PF07475 HPr Serine kinase C-terminal domain DEW08_08220 PF02603 HPr Serine kinase N terminus DEW08_08230 PF13755 Sensor N-terminal transmembrane domain DEW08_08230 PF00512 His Kinase A (phospho-acceptor) domain DEW08_08230 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DEW08_08230 PF00672 HAMP domain DEW08_08230 PF13756 Stimulus-sensing domain DEW08_08235 PF00486 Transcriptional regulatory protein, C terminal DEW08_08235 PF00072 Response regulator receiver domain DEW08_08245 PF00821 Phosphoenolpyruvate carboxykinase C-terminal P-loop domain DEW08_08245 PF17297 Phosphoenolpyruvate carboxykinase N-terminal domain DEW08_08250 PF01618 MotA/TolQ/ExbB proton channel family DEW08_08265 PF01476 LysM domain DEW08_08265 PF01551 Peptidase family M23 DEW08_08265 PF08525 Opacity-associated protein A N-terminal motif DEW08_08315 PF13276 HTH-like domain DEW08_08315 PF13333 Integrase core domain DEW08_08315 PF00665 Integrase core domain DEW08_08320 PF01527 Transposase DEW08_08335 PF01527 Transposase DEW08_08385 PF00550 Phosphopantetheine attachment site DEW08_08390 PF00550 Phosphopantetheine attachment site DEW08_08400 PF07977 FabA-like domain DEW08_08410 PF03061 Thioesterase superfamily DEW08_08435 PF02801 Beta-ketoacyl synthase, C-terminal domain DEW08_08435 PF00109 Beta-ketoacyl synthase, N-terminal domain DEW08_08460 PF00072 Response regulator receiver domain DEW08_08460 PF00196 Bacterial regulatory proteins, luxR family DEW08_08475 PF00107 Zinc-binding dehydrogenase DEW08_08475 PF08240 Alcohol dehydrogenase GroES-like domain DEW08_08480 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family DEW08_08480 PF03466 LysR substrate binding domain DEW08_08495 PF00563 EAL domain DEW08_08495 PF01590 GAF domain DEW08_08495 PF00989 PAS fold DEW08_08495 PF00990 Diguanylate cyclase, GGDEF domain DEW08_08500 PF00005 ABC transporter DEW08_08500 PF08352 Oligopeptide/dipeptide transporter, C-terminal region DEW08_08505 PF08352 Oligopeptide/dipeptide transporter, C-terminal region DEW08_08505 PF00005 ABC transporter DEW08_08515 PF00528 Binding-protein-dependent transport system inner membrane component DEW08_08525 PF01008 Initiation factor 2 subunit family DEW08_08570 PF00216 Bacterial DNA-binding protein DEW08_08580 PF02423 Ornithine cyclodeaminase/mu-crystallin family DEW08_08585 PF01266 FAD dependent oxidoreductase DEW08_08600 PF00215 Orotidine 5'-phosphate decarboxylase / HUMPS family DEW08_08605 PF00697 N-(5'phosphoribosyl)anthranilate (PRA) isomerase DEW08_08610 PF00990 Diguanylate cyclase, GGDEF domain DEW08_08610 PF00072 Response regulator receiver domain DEW08_08625 PF02678 Pirin DEW08_08625 PF05726 Pirin C-terminal cupin domain DEW08_08635 PF06213 Cobalamin biosynthesis protein CobT DEW08_08635 PF11775 Cobalamin biosynthesis protein CobT VWA domain DEW08_08645 PF08406 CbbQ/NirQ/NorQ C-terminal DEW08_08645 PF12556 Cobaltochelatase CobS subunit N terminal DEW08_08645 PF07728 AAA domain (dynein-related subfamily) DEW08_08650 PF00226 DnaJ domain DEW08_08655 PF01722 BolA-like protein DEW08_08670 PF00571 CBS domain DEW08_08675 PF01761 3-dehydroquinate synthase DEW08_08690 PF00589 Phage integrase family DEW08_08690 PF02899 Phage integrase, N-terminal SAM-like domain DEW08_08695 PF01274 Malate synthase DEW08_08700 PF05958 tRNA (Uracil-5-)-methyltransferase DEW08_08705 PF03255 Acetyl co-enzyme A carboxylase carboxyltransferase alpha subunit DEW08_08715 PF00535 Glycosyl transferase family 2 DEW08_08715 PF01501 Glycosyl transferase family 8 DEW08_08730 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain DEW08_08730 PF17200 Single Cache domain 2 DEW08_08730 PF00672 HAMP domain DEW08_08735 PF00534 Glycosyl transferases group 1 DEW08_08735 PF13439 Glycosyltransferase Family 4 DEW08_08745 PF13439 Glycosyltransferase Family 4 DEW08_08745 PF00534 Glycosyl transferases group 1 DEW08_08750 PF01370 NAD dependent epimerase/dehydratase family DEW08_08755 PF01370 NAD dependent epimerase/dehydratase family DEW08_08770 PF13807 G-rich domain on putative tyrosine kinase DEW08_08770 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain DEW08_08770 PF02706 Chain length determinant protein DEW08_08785 PF00072 Response regulator receiver domain DEW08_08785 PF02954 Bacterial regulatory protein, Fis family DEW08_08790 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DEW08_08790 PF00512 His Kinase A (phospho-acceptor) domain DEW08_08805 PF00132 Bacterial transferase hexapeptide (six repeats) DEW08_08810 PF00550 Phosphopantetheine attachment site DEW08_08815 PF02801 Beta-ketoacyl synthase, C-terminal domain DEW08_08815 PF00109 Beta-ketoacyl synthase, N-terminal domain DEW08_08830 PF02654 Cobalamin-5-phosphate synthase DEW08_08840 PF01381 Helix-turn-helix DEW08_08845 PF02277 Phosphoribosyltransferase DEW08_08850 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DEW08_08850 PF00512 His Kinase A (phospho-acceptor) domain DEW08_08850 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) DEW08_08850 PF01627 Hpt domain DEW08_08850 PF00072 Response regulator receiver domain DEW08_08850 PF00672 HAMP domain DEW08_08860 PF01546 Peptidase family M20/M25/M40 DEW08_08860 PF07687 Peptidase dimerisation domain DEW08_08865 PF14602 Hexapeptide repeat of succinyl-transferase DEW08_08865 PF00132 Bacterial transferase hexapeptide (six repeats) DEW08_08865 PF14805 Tetrahydrodipicolinate N-succinyltransferase N-terminal DEW08_08875 PF00990 Diguanylate cyclase, GGDEF domain DEW08_08875 PF00563 EAL domain DEW08_08875 PF03707 Bacterial signalling protein N terminal repeat DEW08_08900 PF00448 SRP54-type protein, GTPase domain DEW08_08900 PF02881 SRP54-type protein, helical bundle domain DEW08_08900 PF02978 Signal peptide binding domain DEW08_08905 PF00886 Ribosomal protein S16 DEW08_08910 PF05239 PRC-barrel domain DEW08_08910 PF01782 RimM N-terminal domain DEW08_08915 PF01746 tRNA (Guanine-1)-methyltransferase DEW08_08920 PF01245 Ribosomal protein L19 DEW08_08925 PF00468 Ribosomal protein L34 DEW08_08930 PF00825 Ribonuclease P DEW08_08935 PF01809 Putative membrane protein insertion efficiency factor DEW08_08940 PF02096 60Kd inner membrane protein DEW08_08940 PF14849 YidC periplasmic domain DEW08_08945 PF01926 50S ribosome-binding GTPase DEW08_08960 PF00696 Amino acid kinase family DEW08_08970 PF01544 CorA-like Mg2+ transporter protein DEW08_08985 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain DEW08_08995 PF02646 RmuC family DEW08_09020 PF03358 NADPH-dependent FMN reductase DEW08_09025 PF00155 Aminotransferase class I and II DEW08_09030 PF00202 Aminotransferase class-III DEW08_09035 PF13417 Glutathione S-transferase, N-terminal domain DEW08_09045 PF00563 EAL domain DEW08_09045 PF08448 PAS fold DEW08_09045 PF08447 PAS fold DEW08_09045 PF00990 Diguanylate cyclase, GGDEF domain DEW08_09060 PF03466 LysR substrate binding domain DEW08_09060 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family DEW08_09070 PF07690 Major Facilitator Superfamily DEW08_09075 PF00378 Enoyl-CoA hydratase/isomerase DEW08_09100 PF13477 Glycosyl transferase 4-like DEW08_09100 PF00534 Glycosyl transferases group 1 DEW08_09120 PF13614 AAA domain DEW08_09130 PF02624 YcaO cyclodehydratase, ATP-ad Mg2+-binding DEW08_09140 PF02597 ThiS family DEW08_09145 PF00072 Response regulator receiver domain DEW08_09145 PF01966 HD domain DEW08_09155 PF02743 Cache domain DEW08_09155 PF00512 His Kinase A (phospho-acceptor) domain DEW08_09155 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DEW08_09160 PF00672 HAMP domain DEW08_09160 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DEW08_09160 PF18698 Histidine kinase sensor domain DEW08_09160 PF00512 His Kinase A (phospho-acceptor) domain DEW08_09170 PF00929 Exonuclease DEW08_09175 PF00072 Response regulator receiver domain DEW08_09175 PF00486 Transcriptional regulatory protein, C terminal DEW08_09185 PF02416 mttA/Hcf106 family DEW08_09190 PF04279 Intracellular septation protein A DEW08_09200 PF10423 Bacterial AMP nucleoside phosphorylase N-terminus DEW08_09200 PF01048 Phosphorylase superfamily DEW08_09210 PF04955 HupE / UreJ protein DEW08_09215 PF16868 NMT1-like family DEW08_09230 PF12404 Peptidase DEW08_09230 PF00883 Cytosol aminopeptidase family, catalytic domain DEW08_09235 PF01706 FliG C-terminal domain DEW08_09235 PF14841 FliG middle domain DEW08_09235 PF14842 FliG N-terminal domain DEW08_09245 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain DEW08_09250 PF00849 RNA pseudouridylate synthase DEW08_09255 PF08352 Oligopeptide/dipeptide transporter, C-terminal region DEW08_09255 PF00005 ABC transporter DEW08_09260 PF12911 N-terminal TM domain of oligopeptide transport permease C DEW08_09260 PF00528 Binding-protein-dependent transport system inner membrane component DEW08_09265 PF00528 Binding-protein-dependent transport system inner membrane component DEW08_09270 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle DEW08_09275 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle DEW08_09280 PF13193 AMP-binding enzyme C-terminal domain DEW08_09280 PF00501 AMP-binding enzyme DEW08_09290 PF00708 Acylphosphatase DEW08_09310 PF05690 Thiazole biosynthesis protein ThiG DEW08_09320 PF01266 FAD dependent oxidoreductase DEW08_09320 PF05690 Thiazole biosynthesis protein ThiG DEW08_09325 PF00571 CBS domain DEW08_09325 PF01769 Divalent cation transporter DEW08_09325 PF03448 MgtE intracellular N domain DEW08_09340 PF03099 Biotin/lipoate A/B protein ligase family DEW08_09365 PF01609 Transposase DDE domain DEW08_09365 PF13808 DDE_Tnp_1-associated DEW08_09370 PF00072 Response regulator receiver domain DEW08_09370 PF00486 Transcriptional regulatory protein, C terminal DEW08_09375 PF01323 DSBA-like thioredoxin domain DEW08_09385 PF03466 LysR substrate binding domain DEW08_09385 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family DEW08_09395 PF05173 Dihydrodipicolinate reductase, C-terminus DEW08_09395 PF01113 Dihydrodipicolinate reductase, N-terminus DEW08_09440 PF00072 Response regulator receiver domain DEW08_09440 PF00486 Transcriptional regulatory protein, C terminal DEW08_09445 PF08298 PrkA AAA domain DEW08_09445 PF06798 PrkA serine protein kinase C-terminal domain DEW08_09450 PF04285 Protein of unknown function (DUF444) DEW08_09455 PF04293 SpoVR like protein DEW08_09460 PF04408 Helicase associated domain (HA2) DEW08_09460 PF00271 Helicase conserved C-terminal domain DEW08_09460 PF08482 ATP-dependent helicase C-terminal DEW08_09460 PF00270 DEAD/DEAH box helicase DEW08_09475 PF00486 Transcriptional regulatory protein, C terminal DEW08_09475 PF00072 Response regulator receiver domain DEW08_09505 PF08471 Class II vitamin B12-dependent ribonucleotide reductase DEW08_09505 PF02867 Ribonucleotide reductase, barrel domain DEW08_09520 PF12146 Serine aminopeptidase, S33 DEW08_09525 PF03330 Lytic transglycolase DEW08_09530 PF01575 MaoC like domain DEW08_09535 PF01687 Riboflavin kinase DEW08_09535 PF06574 FAD synthetase DEW08_09545 PF01594 AI-2E family transporter DEW08_09565 PF01513 ATP-NAD kinase DEW08_09570 PF10431 C-terminal, D2-small domain, of ClpB protein DEW08_09570 PF02861 Clp amino terminal domain, pathogenicity island component DEW08_09570 PF17871 AAA lid domain DEW08_09570 PF07724 AAA domain (Cdc48 subfamily) DEW08_09570 PF00004 ATPase family associated with various cellular activities (AAA) DEW08_09575 PF02617 ATP-dependent Clp protease adaptor protein ClpS DEW08_09600 PF07943 Penicillin-binding protein 5, C-terminal domain DEW08_09600 PF00768 D-alanyl-D-alanine carboxypeptidase DEW08_09605 PF00072 Response regulator receiver domain DEW08_09605 PF01627 Hpt domain DEW08_09605 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DEW08_09605 PF01584 CheW-like domain DEW08_09615 PF01627 Hpt domain DEW08_09615 PF00512 His Kinase A (phospho-acceptor) domain DEW08_09615 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DEW08_09615 PF00672 HAMP domain DEW08_09615 PF00072 Response regulator receiver domain DEW08_09620 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DEW08_09620 PF00512 His Kinase A (phospho-acceptor) domain DEW08_09630 PF01515 Phosphate acetyl/butaryl transferase DEW08_09635 PF00871 Acetokinase family DEW08_09640 PF00444 Ribosomal protein L36 DEW08_09645 PF01565 FAD binding domain DEW08_09645 PF02913 FAD linked oxidases, C-terminal domain DEW08_09650 PF01565 FAD binding domain DEW08_09655 PF02754 Cysteine-rich domain DEW08_09655 PF13183 4Fe-4S dicluster domain DEW08_09660 PF01066 CDP-alcohol phosphatidyltransferase DEW08_09680 PF00465 Iron-containing alcohol dehydrogenase DEW08_09685 PF02770 Acyl-CoA dehydrogenase, middle domain DEW08_09685 PF12806 Acetyl-CoA dehydrogenase C-terminal like DEW08_09685 PF00441 Acyl-CoA dehydrogenase, C-terminal domain DEW08_09685 PF02771 Acyl-CoA dehydrogenase, N-terminal domain DEW08_09695 PF13614 AAA domain DEW08_09700 PF03481 Putative GTP-binding controlling metal-binding DEW08_09700 PF01300 Telomere recombination DEW08_09705 PF01636 Phosphotransferase enzyme family DEW08_09710 PF02913 FAD linked oxidases, C-terminal domain DEW08_09710 PF01565 FAD binding domain DEW08_09715 PF00330 Aconitase family (aconitate hydratase) DEW08_09725 PF02653 Branched-chain amino acid transport system / permease component DEW08_09730 PF01416 tRNA pseudouridine synthase DEW08_09735 PF02911 Formyl transferase, C-terminal domain DEW08_09735 PF00551 Formyl transferase DEW08_09740 PF01327 Polypeptide deformylase DEW08_09755 PF00578 AhpC/TSA family DEW08_09760 PF08335 GlnD PII-uridylyltransferase DEW08_09760 PF03710 Glutamate-ammonia ligase adenylyltransferase DEW08_09770 PF00579 tRNA synthetases class I (W and Y) DEW08_09775 PF03702 Anhydro-N-acetylmuramic acid kinase DEW08_09780 PF03588 Leucyl/phenylalanyl-tRNA protein transferase DEW08_09785 PF00445 Ribonuclease T2 family DEW08_09795 PF02386 Cation transport protein DEW08_09800 PF02254 TrkA-N domain DEW08_09800 PF02080 TrkA-C domain DEW08_09825 PF04542 Sigma-70 region 2 DEW08_09825 PF08281 Sigma-70, region 4 DEW08_09840 PF06965 Na+/H+ antiporter 1 DEW08_09855 PF00582 Universal stress protein family DEW08_09865 PF00690 Cation transporter/ATPase, N-terminus DEW08_09865 PF00689 Cation transporting ATPase, C-terminus DEW08_09870 PF02254 TrkA-N domain DEW08_09870 PF00999 Sodium/hydrogen exchanger family DEW08_09900 PF00111 2Fe-2S iron-sulfur cluster binding domain DEW08_09905 PF07743 HSCB C-terminal oligomerisation domain DEW08_09905 PF00226 DnaJ domain DEW08_09910 PF00266 Aminotransferase class-V DEW08_09915 PF02082 Transcriptional regulator DEW08_09920 PF06426 Serine acetyltransferase, N-terminal DEW08_09920 PF00132 Bacterial transferase hexapeptide (six repeats) DEW08_09925 PF02129 X-Pro dipeptidyl-peptidase (S15 family) DEW08_09955 PF01810 LysE type translocator DEW08_09965 PF02606 Tetraacyldisaccharide-1-P 4'-kinase DEW08_09970 PF04413 3-Deoxy-D-manno-octulosonic-acid transferase (kdotransferase) DEW08_09980 PF12833 Helix-turn-helix domain DEW08_09985 PF13439 Glycosyltransferase Family 4 DEW08_09985 PF00534 Glycosyl transferases group 1 DEW08_09995 PF00781 Diacylglycerol kinase catalytic domain DEW08_10005 PF01523 Putative modulator of DNA gyrase DEW08_10025 PF01977 3-octaprenyl-4-hydroxybenzoate carboxy-lyase DEW08_10050 PF04452 RNA methyltransferase DEW08_10055 PF04107 Glutamate-cysteine ligase family 2(GCS2) DEW08_10070 PF00905 Penicillin binding protein transpeptidase domain DEW08_10070 PF17092 Penicillin-binding protein OB-like domain DEW08_10070 PF00912 Transglycosylase DEW08_10075 PF01520 N-acetylmuramoyl-L-alanine amidase DEW08_10075 PF11741 AMIN domain DEW08_10080 PF12111 Polyribonucleotide phosphorylase C terminal DEW08_10080 PF10150 Ribonuclease E/G family DEW08_10080 PF00575 S1 RNA binding domain DEW08_10085 PF01272 Transcription elongation factor, GreA/GreB, C-term DEW08_10085 PF03449 Transcription elongation factor, N-terminal DEW08_10140 PF00589 Phage integrase family DEW08_10140 PF02899 Phage integrase, N-terminal SAM-like domain DEW08_10165 PF13419 Haloacid dehalogenase-like hydrolase DEW08_10185 PF03707 Bacterial signalling protein N terminal repeat DEW08_10185 PF00563 EAL domain DEW08_10185 PF00990 Diguanylate cyclase, GGDEF domain DEW08_10205 PF00501 AMP-binding enzyme DEW08_10205 PF13193 AMP-binding enzyme C-terminal domain DEW08_10205 PF16177 Acetyl-coenzyme A synthetase N-terminus DEW08_10230 PF00480 ROK family DEW08_10240 PF02358 Trehalose-phosphatase DEW08_10250 PF00005 ABC transporter DEW08_10255 PF00005 ABC transporter DEW08_10255 PF12399 Branched-chain amino acid ATP-binding cassette transporter DEW08_10265 PF13458 Periplasmic binding protein DEW08_10300 PF13808 DDE_Tnp_1-associated DEW08_10300 PF01609 Transposase DDE domain DEW08_10305 PF08032 RNA 2'-O ribose methyltransferase substrate binding DEW08_10305 PF00588 SpoU rRNA Methylase family DEW08_10320 PF00009 Elongation factor Tu GTP binding domain DEW08_10320 PF03143 Elongation factor Tu C-terminal domain DEW08_10320 PF03144 Elongation factor Tu domain 2 DEW08_10335 PF02357 Transcription termination factor nusG DEW08_10335 PF00467 KOW motif DEW08_10340 PF03946 Ribosomal protein L11, N-terminal domain DEW08_10340 PF00298 Ribosomal protein L11, RNA binding domain DEW08_10345 PF00687 Ribosomal protein L1p/L10e family DEW08_10350 PF00466 Ribosomal protein L10 DEW08_10355 PF00542 Ribosomal protein L7/L12 C-terminal domain DEW08_10355 PF16320 Ribosomal protein L7/L12 dimerisation domain DEW08_10365 PF04998 RNA polymerase Rpb1, domain 5 DEW08_10365 PF05000 RNA polymerase Rpb1, domain 4 DEW08_10365 PF04997 RNA polymerase Rpb1, domain 1 DEW08_10365 PF04983 RNA polymerase Rpb1, domain 3 DEW08_10365 PF00623 RNA polymerase Rpb1, domain 2 DEW08_10370 PF00164 Ribosomal protein S12/S23 DEW08_10375 PF00177 Ribosomal protein S7p/S5e DEW08_10380 PF03144 Elongation factor Tu domain 2 DEW08_10380 PF00679 Elongation factor G C-terminus DEW08_10380 PF00009 Elongation factor Tu GTP binding domain DEW08_10380 PF14492 Elongation Factor G, domain II DEW08_10380 PF03764 Elongation factor G, domain IV DEW08_10385 PF03143 Elongation factor Tu C-terminal domain DEW08_10385 PF03144 Elongation factor Tu domain 2 DEW08_10385 PF00009 Elongation factor Tu GTP binding domain DEW08_10390 PF00338 Ribosomal protein S10p/S20e DEW08_10395 PF00297 Ribosomal protein L3 DEW08_10400 PF00573 Ribosomal protein L4/L1 family DEW08_10405 PF00276 Ribosomal protein L23 DEW08_10410 PF00181 Ribosomal Proteins L2, RNA binding domain DEW08_10410 PF03947 Ribosomal Proteins L2, C-terminal domain DEW08_10415 PF00203 Ribosomal protein S19 DEW08_10420 PF00237 Ribosomal protein L22p/L17e DEW08_10425 PF00189 Ribosomal protein S3, C-terminal domain DEW08_10425 PF07650 KH domain DEW08_10430 PF00252 Ribosomal protein L16p/L10e DEW08_10435 PF00831 Ribosomal L29 protein DEW08_10440 PF00366 Ribosomal protein S17 DEW08_10445 PF00238 Ribosomal protein L14p/L23e DEW08_10450 PF17136 Ribosomal proteins 50S L24/mitochondrial 39S L24 DEW08_10450 PF00467 KOW motif DEW08_10455 PF00673 ribosomal L5P family C-terminus DEW08_10455 PF00281 Ribosomal protein L5 DEW08_10460 PF00253 Ribosomal protein S14p/S29e DEW08_10465 PF00410 Ribosomal protein S8 DEW08_10470 PF00347 Ribosomal protein L6 DEW08_10475 PF00861 Ribosomal L18 of archaea, bacteria, mitoch. and chloroplast DEW08_10480 PF00333 Ribosomal protein S5, N-terminal domain DEW08_10480 PF03719 Ribosomal protein S5, C-terminal domain DEW08_10485 PF00327 Ribosomal protein L30p/L7e DEW08_10490 PF00828 Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27A DEW08_10495 PF00344 SecY translocase DEW08_10500 PF05191 Adenylate kinase, active site lid DEW08_10525 PF04107 Glutamate-cysteine ligase family 2(GCS2) DEW08_10540 PF01053 Cys/Met metabolism PLP-dependent enzyme DEW08_10545 PF00561 alpha/beta hydrolase fold DEW08_10550 PF00989 PAS fold DEW08_10550 PF13188 PAS domain DEW08_10550 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DEW08_10550 PF00512 His Kinase A (phospho-acceptor) domain DEW08_10555 PF00011 Hsp20/alpha crystallin family DEW08_10565 PF01197 Ribosomal protein L31 DEW08_10575 PF04235 Protein of unknown function (DUF418) DEW08_10585 PF02639 Uncharacterized BCR, YaiI/YqxD family COG1671 DEW08_10590 PF12848 ABC transporter DEW08_10590 PF00005 ABC transporter DEW08_10620 PF13847 Methyltransferase domain DEW08_10620 PF03551 Transcriptional regulator PadR-like family DEW08_10625 PF02219 Methylenetetrahydrofolate reductase DEW08_10635 PF02607 B12 binding domain DEW08_10635 PF02965 Vitamin B12 dependent methionine synthase, activation domain DEW08_10635 PF00809 Pterin binding enzyme DEW08_10635 PF02310 B12 binding domain DEW08_10635 PF02574 Homocysteine S-methyltransferase DEW08_10670 PF00990 Diguanylate cyclase, GGDEF domain DEW08_10675 PF01568 Molydopterin dinucleotide binding domain DEW08_10675 PF00384 Molybdopterin oxidoreductase DEW08_10675 PF04879 Molybdopterin oxidoreductase Fe4S4 domain DEW08_10680 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component DEW08_10685 PF04290 Tripartite ATP-independent periplasmic transporters, DctQ component DEW08_10690 PF03480 Bacterial extracellular solute-binding protein, family 7 DEW08_10695 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DEW08_10695 PF00989 PAS fold DEW08_10695 PF00512 His Kinase A (phospho-acceptor) domain DEW08_10700 PF00196 Bacterial regulatory proteins, luxR family DEW08_10700 PF00072 Response regulator receiver domain DEW08_10710 PF00072 Response regulator receiver domain DEW08_10710 PF00486 Transcriptional regulatory protein, C terminal DEW08_10715 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DEW08_10715 PF13426 PAS domain DEW08_10715 PF00072 Response regulator receiver domain DEW08_10725 PF00072 Response regulator receiver domain DEW08_10725 PF00990 Diguanylate cyclase, GGDEF domain DEW08_10740 PF05951 Bacterial protein of unknown function (DUF882) DEW08_10750 PF00072 Response regulator receiver domain DEW08_10750 PF00196 Bacterial regulatory proteins, luxR family DEW08_10755 PF07568 Histidine kinase DEW08_10755 PF12282 Signal transduction histidine kinase DEW08_10755 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DEW08_10760 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family DEW08_10760 PF03466 LysR substrate binding domain DEW08_10765 PF00892 EamA-like transporter family DEW08_10770 PF03129 Anticodon binding domain DEW08_10770 PF13393 Histidyl-tRNA synthetase DEW08_10780 PF01979 Amidohydrolase family DEW08_10785 PF07859 alpha/beta hydrolase fold DEW08_10785 PF13472 GDSL-like Lipase/Acylhydrolase family DEW08_10790 PF01209 ubiE/COQ5 methyltransferase family DEW08_10795 PF02601 Exonuclease VII, large subunit DEW08_10795 PF13742 OB-fold nucleic acid binding domain DEW08_10800 PF02843 Phosphoribosylglycinamide synthetase, C domain DEW08_10800 PF02844 Phosphoribosylglycinamide synthetase, N domain DEW08_10800 PF01071 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain DEW08_10810 PF14437 MafB19-like deaminase DEW08_10815 PF00849 RNA pseudouridylate synthase DEW08_10815 PF01479 S4 domain DEW08_10825 PF16657 Maltogenic Amylase, C-terminal domain DEW08_10825 PF00128 Alpha amylase, catalytic domain DEW08_10830 PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase DEW08_10835 PF01119 DNA mismatch repair protein, C-terminal domain DEW08_10835 PF08676 MutL C terminal dimerisation domain DEW08_10850 PF00342 Phosphoglucose isomerase DEW08_10855 PF05193 Peptidase M16 inactive domain DEW08_10860 PF00675 Insulinase (Peptidase family M16) DEW08_10860 PF05193 Peptidase M16 inactive domain DEW08_10870 PF01252 Signal peptidase (SPase) II DEW08_10875 PF08264 Anticodon-binding domain of tRNA DEW08_10875 PF00133 tRNA synthetases class I (I, L, M and V) DEW08_10885 PF03150 Di-haem cytochrome c peroxidase DEW08_10890 PF00156 Phosphoribosyl transferase domain DEW08_10895 PF00005 ABC transporter DEW08_10895 PF03459 TOBE domain DEW08_10910 PF03738 Glutathionylspermidine synthase preATP-grasp DEW08_10920 PF05233 PHB accumulation regulatory domain DEW08_10920 PF07879 PHB/PHA accumulation regulator DNA-binding domain DEW08_10925 PF07167 Poly-beta-hydroxybutyrate polymerase (PhaC) N-terminus DEW08_10925 PF00561 alpha/beta hydrolase fold DEW08_10930 PF00108 Thiolase, N-terminal domain DEW08_10930 PF02803 Thiolase, C-terminal domain DEW08_10945 PF07690 Major Facilitator Superfamily DEW08_10950 PF03466 LysR substrate binding domain DEW08_10950 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family DEW08_10960 PF00563 EAL domain DEW08_10960 PF13188 PAS domain DEW08_10960 PF00990 Diguanylate cyclase, GGDEF domain DEW08_10960 PF03707 Bacterial signalling protein N terminal repeat DEW08_10965 PF01926 50S ribosome-binding GTPase DEW08_10965 PF06071 Protein of unknown function (DUF933) DEW08_10970 PF01195 Peptidyl-tRNA hydrolase DEW08_10975 PF01386 Ribosomal L25p family DEW08_10975 PF14693 Ribosomal protein TL5, C-terminal domain DEW08_10980 PF03788 LrgA family DEW08_10985 PF04172 LrgB-like family DEW08_10990 PF00682 HMGL-like DEW08_10990 PF08502 LeuA allosteric (dimerisation) domain DEW08_10995 PF01370 NAD dependent epimerase/dehydratase family DEW08_11010 PF01790 Prolipoprotein diacylglyceryl transferase DEW08_11030 PF13793 N-terminal domain of ribose phosphate pyrophosphokinase DEW08_11030 PF14572 Phosphoribosyl synthetase-associated domain DEW08_11035 PF12146 Serine aminopeptidase, S33 DEW08_11045 PF13823 Alcohol dehydrogenase GroES-associated DEW08_11045 PF00107 Zinc-binding dehydrogenase DEW08_11045 PF08240 Alcohol dehydrogenase GroES-like domain DEW08_11060 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) DEW08_11060 PF11941 Domain of unknown function (DUF3459) DEW08_11060 PF00128 Alpha amylase, catalytic domain DEW08_11080 PF01522 Polysaccharide deacetylase DEW08_11085 PF00430 ATP synthase B/B' CF(0) DEW08_11085 PF11154 Protein of unknown function (DUF2934) DEW08_11095 PF01471 Putative peptidoglycan binding domain DEW08_11095 PF03734 L,D-transpeptidase catalytic domain DEW08_11100 PF05951 Bacterial protein of unknown function (DUF882) DEW08_11135 PF01220 Dehydroquinase class II DEW08_11140 PF00364 Biotin-requiring enzyme DEW08_11145 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain DEW08_11145 PF02785 Biotin carboxylase C-terminal domain DEW08_11145 PF00289 Biotin carboxylase, N-terminal domain DEW08_11165 PF04891 NifQ DEW08_11175 PF01618 MotA/TolQ/ExbB proton channel family DEW08_11180 PF13677 Membrane MotB of proton-channel complex MotA/MotB DEW08_11180 PF00691 OmpA family DEW08_11190 PF01894 Uncharacterised protein family UPF0047 DEW08_11205 PF01810 LysE type translocator DEW08_11210 PF17820 PDZ domain DEW08_11210 PF13180 PDZ domain DEW08_11220 PF00672 HAMP domain DEW08_11220 PF00512 His Kinase A (phospho-acceptor) domain DEW08_11220 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DEW08_11225 PF02492 CobW/HypB/UreG, nucleotide-binding domain DEW08_11225 PF07683 Cobalamin synthesis protein cobW C-terminal domain DEW08_11230 PF01475 Ferric uptake regulator family DEW08_11235 PF03441 FAD binding domain of DNA photolyase DEW08_11235 PF00875 DNA photolyase DEW08_11250 PF00270 DEAD/DEAH box helicase DEW08_11250 PF08494 DEAD/H associated DEW08_11250 PF00271 Helicase conserved C-terminal domain DEW08_11260 PF05161 MOFRL family DEW08_11260 PF13660 Domain of unknown function (DUF4147) DEW08_11270 PF00669 Bacterial flagellin N-terminal helical region DEW08_11270 PF00700 Bacterial flagellin C-terminal helical region DEW08_11290 PF04055 Radical SAM superfamily DEW08_11290 PF06463 Molybdenum Cofactor Synthesis C DEW08_11305 PF12849 PBP superfamily domain DEW08_11310 PF00528 Binding-protein-dependent transport system inner membrane component DEW08_11315 PF02634 FdhD/NarQ family DEW08_11320 PF12804 MobA-like NTP transferase domain DEW08_11345 PF00384 Molybdopterin oxidoreductase DEW08_11345 PF04879 Molybdopterin oxidoreductase Fe4S4 domain DEW08_11345 PF01568 Molydopterin dinucleotide binding domain DEW08_11350 PF13247 4Fe-4S dicluster domain DEW08_11370 PF00596 Class II Aldolase and Adducin N-terminal domain DEW08_11380 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DEW08_11380 PF00072 Response regulator receiver domain DEW08_11380 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) DEW08_11380 PF01627 Hpt domain DEW08_11380 PF00512 His Kinase A (phospho-acceptor) domain DEW08_11380 PF00672 HAMP domain DEW08_11385 PF02900 Catalytic LigB subunit of aromatic ring-opening dioxygenase DEW08_11390 PF00430 ATP synthase B/B' CF(0) DEW08_11395 PF00430 ATP synthase B/B' CF(0) DEW08_11400 PF00137 ATP synthase subunit C DEW08_11405 PF00119 ATP synthase A chain DEW08_11415 PF02630 SCO1/SenC DEW08_11420 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain DEW08_11420 PF17200 Single Cache domain 2 DEW08_11420 PF00672 HAMP domain DEW08_11430 PF05209 Septum formation inhibitor MinC, N-terminal domain DEW08_11430 PF03775 Septum formation inhibitor MinC, C-terminal domain DEW08_11435 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain DEW08_11455 PF00672 HAMP domain DEW08_11455 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain DEW08_11460 PF00672 HAMP domain DEW08_11460 PF12729 Four helix bundle sensory module for signal transduction DEW08_11460 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain DEW08_11465 PF13378 Enolase C-terminal domain-like DEW08_11465 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain DEW08_11480 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family DEW08_11490 PF06988 NifT/FixU protein DEW08_11495 PF00266 Aminotransferase class-V DEW08_11505 PF04319 NifZ domain DEW08_11510 PF01816 Leucine rich repeat variant DEW08_11510 PF05484 LRV protein FeS4 cluster DEW08_11520 PF12838 4Fe-4S dicluster domain DEW08_11525 PF02579 Dinitrogenase iron-molybdenum cofactor DEW08_11525 PF04055 Radical SAM superfamily DEW08_11530 PF03466 LysR substrate binding domain DEW08_11530 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family DEW08_11540 PF00211 Adenylate and Guanylate cyclase catalytic domain DEW08_11550 PF00440 Bacterial regulatory proteins, tetR family DEW08_11560 PF00005 ABC transporter DEW08_11575 PF03411 Penicillin-insensitive murein endopeptidase DEW08_11595 PF01575 MaoC like domain DEW08_11610 PF03963 Flagellar hook capping protein - N-terminal region DEW08_11630 PF02119 Flagellar P-ring protein DEW08_11640 PF01258 Prokaryotic dksA/traR C4-type zinc finger DEW08_11650 PF02107 Flagellar L-ring protein DEW08_11660 PF00460 Flagella basal body rod protein DEW08_11660 PF06429 Flagellar basal body rod FlgEFG protein C-terminal DEW08_11665 PF06429 Flagellar basal body rod FlgEFG protein C-terminal DEW08_11665 PF00460 Flagella basal body rod protein DEW08_11675 PF02154 Flagellar motor switch protein FliM DEW08_11675 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term DEW08_11695 PF18125 RlmM ferredoxin-like domain DEW08_11695 PF01728 FtsJ-like methyltransferase DEW08_11710 PF02719 Polysaccharide biosynthesis protein DEW08_11715 PF01370 NAD dependent epimerase/dehydratase family DEW08_11730 PF01370 NAD dependent epimerase/dehydratase family DEW08_11745 PF00583 Acetyltransferase (GNAT) family DEW08_11755 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) DEW08_11770 PF01965 DJ-1/PfpI family DEW08_11775 PF00072 Response regulator receiver domain DEW08_11775 PF00196 Bacterial regulatory proteins, luxR family DEW08_11780 PF00072 Response regulator receiver domain DEW08_11780 PF00196 Bacterial regulatory proteins, luxR family DEW08_11785 PF00941 FAD binding domain in molybdopterin dehydrogenase DEW08_11785 PF03450 CO dehydrogenase flavoprotein C-terminal domain DEW08_11790 PF01315 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain DEW08_11790 PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase DEW08_11795 PF01774 UreD urease accessory protein DEW08_11815 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain DEW08_11815 PF00672 HAMP domain DEW08_11820 PF00547 Urease, gamma subunit DEW08_11825 PF00699 Urease beta subunit DEW08_11830 PF01979 Amidohydrolase family DEW08_11830 PF00449 Urease alpha-subunit, N-terminal domain DEW08_11840 PF02814 UreE urease accessory protein, N-terminal domain DEW08_11840 PF05194 UreE urease accessory protein, C-terminal domain DEW08_11845 PF01730 UreF DEW08_11850 PF02492 CobW/HypB/UreG, nucleotide-binding domain DEW08_11885 PF00155 Aminotransferase class I and II DEW08_11890 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain DEW08_11890 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain DEW08_11890 PF00205 Thiamine pyrophosphate enzyme, central domain DEW08_11895 PF10369 Small subunit of acetolactate synthase DEW08_11910 PF07991 Acetohydroxy acid isomeroreductase, NADPH-binding domain DEW08_11910 PF01450 Acetohydroxy acid isomeroreductase, catalytic domain DEW08_11915 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion DEW08_11925 PF04542 Sigma-70 region 2 DEW08_11925 PF08281 Sigma-70, region 4 DEW08_11940 PF13808 DDE_Tnp_1-associated DEW08_11940 PF01609 Transposase DDE domain DEW08_11950 PF01209 ubiE/COQ5 methyltransferase family DEW08_11955 PF00512 His Kinase A (phospho-acceptor) domain DEW08_11955 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DEW08_11955 PF00672 HAMP domain DEW08_11960 PF00072 Response regulator receiver domain DEW08_11960 PF00486 Transcriptional regulatory protein, C terminal DEW08_11965 PF12802 MarR family DEW08_11975 PF00378 Enoyl-CoA hydratase/isomerase DEW08_11985 PF01048 Phosphorylase superfamily DEW08_11995 PF04227 Indigoidine synthase A like protein DEW08_12010 PF00677 Lumazine binding domain DEW08_12015 PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase DEW08_12015 PF00925 GTP cyclohydrolase II DEW08_12020 PF00885 6,7-dimethyl-8-ribityllumazine synthase DEW08_12025 PF01029 NusB family DEW08_12030 PF02769 AIR synthase related protein, C-terminal domain DEW08_12030 PF00586 AIR synthase related protein, N-terminal domain DEW08_12040 PF03030 Inorganic H+ pyrophosphatase DEW08_12060 PF01783 Ribosomal L32p protein family DEW08_12065 PF02504 Fatty acid synthesis protein DEW08_12070 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal DEW08_12070 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III DEW08_12075 PF00216 Bacterial DNA-binding protein DEW08_12080 PF13411 MerR HTH family regulatory protein DEW08_12110 PF01728 FtsJ-like methyltransferase DEW08_12115 PF00571 CBS domain DEW08_12115 PF00478 IMP dehydrogenase / GMP reductase domain DEW08_12135 PF13193 AMP-binding enzyme C-terminal domain DEW08_12135 PF00501 AMP-binding enzyme DEW08_12150 PF01012 Electron transfer flavoprotein domain DEW08_12155 PF01012 Electron transfer flavoprotein domain DEW08_12155 PF00766 Electron transfer flavoprotein FAD-binding domain DEW08_12170 PF16653 Saccharopine dehydrogenase C-terminal domain DEW08_12170 PF03435 Saccharopine dehydrogenase NADP binding domain DEW08_12175 PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain DEW08_12175 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain DEW08_12180 PF03079 ARD/ARD' family DEW08_12185 PF07690 Major Facilitator Superfamily DEW08_12190 PF17191 RecG wedge domain DEW08_12190 PF00271 Helicase conserved C-terminal domain DEW08_12190 PF00270 DEAD/DEAH box helicase DEW08_12205 PF04140 Isoprenylcysteine carboxyl methyltransferase (ICMT) family DEW08_12215 PF07885 Ion channel DEW08_12215 PF00027 Cyclic nucleotide-binding domain DEW08_12230 PF13302 Acetyltransferase (GNAT) domain DEW08_12240 PF00270 DEAD/DEAH box helicase DEW08_12240 PF00271 Helicase conserved C-terminal domain DEW08_12240 PF03461 TRCF domain DEW08_12240 PF17757 UvrB interaction domain DEW08_12240 PF02559 CarD-like/TRCF domain DEW08_12260 PF03466 LysR substrate binding domain DEW08_12260 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family DEW08_12270 PF00625 Guanylate kinase DEW08_12280 PF00106 short chain dehydrogenase DEW08_12285 PF00398 Ribosomal RNA adenine dimethylase DEW08_12290 PF06055 Exopolysaccharide synthesis, ExoD DEW08_12295 PF12848 ABC transporter DEW08_12295 PF00005 ABC transporter DEW08_12300 PF00334 Nucleoside diphosphate kinase DEW08_12315 PF00551 Formyl transferase DEW08_12320 PF00586 AIR synthase related protein, N-terminal domain DEW08_12320 PF02769 AIR synthase related protein, C-terminal domain DEW08_12335 PF01594 AI-2E family transporter DEW08_12340 PF00308 Bacterial dnaA protein DEW08_12360 PF13089 Polyphosphate kinase N-terminal domain DEW08_12360 PF17941 Polyphosphate kinase C-terminal domain 1 DEW08_12360 PF13090 Polyphosphate kinase C-terminal domain 2 DEW08_12360 PF02503 Polyphosphate kinase middle domain DEW08_12365 PF02541 Ppx/GppA phosphatase family DEW08_12380 PF00004 ATPase family associated with various cellular activities (AAA) DEW08_12380 PF05362 Lon protease (S16) C-terminal proteolytic domain DEW08_12380 PF02190 ATP-dependent protease La (LON) substrate-binding domain DEW08_12405 PF17202 Single cache domain 3 DEW08_12405 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain DEW08_12405 PF00672 HAMP domain DEW08_12410 PF00924 Mechanosensitive ion channel DEW08_12425 PF04333 MlaA lipoprotein DEW08_12445 PF00873 AcrB/AcrD/AcrF family DEW08_12465 PF01545 Cation efflux family DEW08_12475 PF02566 OsmC-like protein DEW08_12480 PF00893 Small Multidrug Resistance protein DEW08_12485 PF13808 DDE_Tnp_1-associated DEW08_12485 PF01609 Transposase DDE domain DEW08_12490 PF04715 Anthranilate synthase component I, N terminal region DEW08_12490 PF00425 chorismate binding enzyme DEW08_12490 PF00117 Glutamine amidotransferase class-I DEW08_12495 PF10073 Uncharacterized protein conserved in bacteria (DUF2312) DEW08_12500 PF13808 DDE_Tnp_1-associated DEW08_12500 PF01609 Transposase DDE domain DEW08_12505 PF01262 Alanine dehydrogenase/PNT, C-terminal domain DEW08_12505 PF05222 Alanine dehydrogenase/PNT, N-terminal domain DEW08_12510 PF12769 4TM region of pyridine nucleotide transhydrogenase, mitoch DEW08_12515 PF02233 NAD(P) transhydrogenase beta subunit DEW08_12525 PF02548 Ketopantoate hydroxymethyltransferase DEW08_12530 PF01165 Ribosomal protein S21 DEW08_12535 PF01327 Polypeptide deformylase DEW08_12560 PF02511 Thymidylate synthase complementing protein DEW08_12580 PF02653 Branched-chain amino acid transport system / permease component DEW08_12585 PF00005 ABC transporter DEW08_12590 PF02254 TrkA-N domain DEW08_12590 PF00999 Sodium/hydrogen exchanger family DEW08_12595 PF01883 Iron-sulfur cluster assembly protein DEW08_12595 PF10609 NUBPL iron-transfer P-loop NTPase DEW08_12605 PF01145 SPFH domain / Band 7 family DEW08_12610 PF13180 PDZ domain DEW08_12615 PF00078 Reverse transcriptase (RNA-dependent DNA polymerase) DEW08_12660 PF01381 Helix-turn-helix DEW08_12670 PF10531 SLBB domain DEW08_12670 PF02563 Polysaccharide biosynthesis/export protein DEW08_12670 PF18412 Outer-membrane lipoprotein Wza C-terminal domain DEW08_12675 PF13439 Glycosyltransferase Family 4 DEW08_12675 PF00534 Glycosyl transferases group 1 DEW08_12695 PF13406 Transglycosylase SLT domain DEW08_12705 PF01895 PhoU domain DEW08_12725 PF00795 Carbon-nitrogen hydrolase DEW08_12740 PF13617 YnbE-like lipoprotein DEW08_12760 PF12804 MobA-like NTP transferase domain DEW08_12765 PF13478 XdhC Rossmann domain DEW08_12765 PF02625 XdhC and CoxI family DEW08_12780 PF17871 AAA lid domain DEW08_12780 PF00004 ATPase family associated with various cellular activities (AAA) DEW08_12780 PF02861 Clp amino terminal domain, pathogenicity island component DEW08_12780 PF10431 C-terminal, D2-small domain, of ClpB protein DEW08_12780 PF07724 AAA domain (Cdc48 subfamily) DEW08_12790 PF00941 FAD binding domain in molybdopterin dehydrogenase DEW08_12790 PF03450 CO dehydrogenase flavoprotein C-terminal domain DEW08_12795 PF01315 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain DEW08_12795 PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase DEW08_12800 PF01799 [2Fe-2S] binding domain DEW08_12800 PF00111 2Fe-2S iron-sulfur cluster binding domain DEW08_12805 PF16868 NMT1-like family DEW08_12825 PF03819 MazG nucleotide pyrophosphohydrolase domain DEW08_12835 PF03099 Biotin/lipoate A/B protein ligase family DEW08_12835 PF12706 Beta-lactamase superfamily domain DEW08_12840 PF01026 TatD related DNase DEW08_12845 PF09334 tRNA synthetases class I (M) DEW08_12850 PF09115 DNA polymerase III, delta subunit, C terminal DEW08_12855 PF02223 Thymidylate kinase DEW08_12860 PF07943 Penicillin-binding protein 5, C-terminal domain DEW08_12860 PF00768 D-alanyl-D-alanine carboxypeptidase DEW08_12865 PF03330 Lytic transglycolase DEW08_12865 PF05036 Sporulation related domain DEW08_12890 PF10458 Valyl tRNA synthetase tRNA binding arm DEW08_12890 PF00133 tRNA synthetases class I (I, L, M and V) DEW08_12890 PF08264 Anticodon-binding domain of tRNA DEW08_12900 PF02321 Outer membrane efflux protein DEW08_12940 PF13180 PDZ domain DEW08_12945 PF00293 NUDIX domain DEW08_12950 PF00291 Pyridoxal-phosphate dependent enzyme DEW08_12950 PF00571 CBS domain DEW08_12955 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain DEW08_12955 PF02272 DHHA1 domain DEW08_12955 PF01411 tRNA synthetases class II (A) DEW08_12960 PF00581 Rhodanese-like domain DEW08_12975 PF00155 Aminotransferase class I and II DEW08_12980 PF00005 ABC transporter DEW08_12985 PF00528 Binding-protein-dependent transport system inner membrane component DEW08_12990 PF00528 Binding-protein-dependent transport system inner membrane component DEW08_12995 PF00497 Bacterial extracellular solute-binding proteins, family 3 DEW08_13000 PF01053 Cys/Met metabolism PLP-dependent enzyme DEW08_13005 PF01502 Phosphoribosyl-AMP cyclohydrolase DEW08_13040 PF00005 ABC transporter DEW08_13045 PF00529 HlyD membrane-fusion protein of T1SS DEW08_13045 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion DEW08_13065 PF00850 Histone deacetylase domain DEW08_13075 PF00005 ABC transporter DEW08_13080 PF00528 Binding-protein-dependent transport system inner membrane component DEW08_13085 PF09084 NMT1/THI5 like DEW08_13095 PF00459 Inositol monophosphatase family DEW08_13110 PF16360 GTP-binding GTPase Middle Region DEW08_13110 PF13167 GTP-binding GTPase N-terminal DEW08_13110 PF01926 50S ribosome-binding GTPase DEW08_13115 PF17209 Hfq protein DEW08_13125 PF02954 Bacterial regulatory protein, Fis family DEW08_13125 PF00158 Sigma-54 interaction domain DEW08_13125 PF00072 Response regulator receiver domain DEW08_13130 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DEW08_13130 PF00672 HAMP domain DEW08_13135 PF00072 Response regulator receiver domain DEW08_13135 PF02954 Bacterial regulatory protein, Fis family DEW08_13135 PF00158 Sigma-54 interaction domain DEW08_13140 PF00989 PAS fold DEW08_13140 PF00512 His Kinase A (phospho-acceptor) domain DEW08_13140 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DEW08_13145 PF01207 Dihydrouridine synthase (Dus) DEW08_13150 PF01578 Cytochrome C assembly protein DEW08_13155 PF01128 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase DEW08_13155 PF02542 YgbB family DEW08_13160 PF18146 Damage-inducible protein CinA KH domain DEW08_13160 PF00994 Probable molybdopterin binding domain DEW08_13160 PF02464 Competence-damaged protein DEW08_13165 PF03364 Polyketide cyclase / dehydrase and lipid transport DEW08_13170 PF16881 N-terminal domain of lipoyl synthase of Radical_SAM family DEW08_13170 PF04055 Radical SAM superfamily DEW08_13180 PF07992 Pyridine nucleotide-disulphide oxidoreductase DEW08_13180 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain DEW08_13190 PF00364 Biotin-requiring enzyme DEW08_13190 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) DEW08_13190 PF02817 e3 binding domain DEW08_13195 PF02779 Transketolase, pyrimidine binding domain DEW08_13195 PF02780 Transketolase, C-terminal domain DEW08_13195 PF00364 Biotin-requiring enzyme DEW08_13200 PF00676 Dehydrogenase E1 component DEW08_13215 PF03061 Thioesterase superfamily DEW08_13230 PF00561 alpha/beta hydrolase fold DEW08_13240 PF00270 DEAD/DEAH box helicase DEW08_13240 PF00271 Helicase conserved C-terminal domain DEW08_13250 PF03968 OstA-like protein DEW08_13250 PF04453 LPS transport system D DEW08_13260 PF00834 Ribulose-phosphate 3 epimerase family DEW08_13270 PF04226 Transglycosylase associated protein DEW08_13275 PF00072 Response regulator receiver domain DEW08_13290 PF00005 ABC transporter DEW08_13300 PF00005 ABC transporter DEW08_13305 PF00009 Elongation factor Tu GTP binding domain DEW08_13310 PF01507 Phosphoadenosine phosphosulfate reductase family DEW08_13315 PF01507 Phosphoadenosine phosphosulfate reductase family DEW08_13320 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases DEW08_13330 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain DEW08_13330 PF01077 Nitrite and sulphite reductase 4Fe-4S domain DEW08_13340 PF00487 Fatty acid desaturase DEW08_13350 PF06480 FtsH Extracellular DEW08_13350 PF17862 AAA+ lid domain DEW08_13350 PF00004 ATPase family associated with various cellular activities (AAA) DEW08_13350 PF01434 Peptidase family M41 DEW08_13365 PF00072 Response regulator receiver domain DEW08_13365 PF00486 Transcriptional regulatory protein, C terminal DEW08_13370 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DEW08_13370 PF00497 Bacterial extracellular solute-binding proteins, family 3 DEW08_13370 PF00512 His Kinase A (phospho-acceptor) domain DEW08_13375 PF09345 Domain of unknown function (DUF1987) DEW08_13385 PF11849 Domain of unknown function (DUF3369) DEW08_13410 PF01503 Phosphoribosyl-ATP pyrophosphohydrolase DEW08_13415 PF00672 HAMP domain DEW08_13415 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain DEW08_13415 PF17202 Single cache domain 3 DEW08_13420 PF01588 Putative tRNA binding domain DEW08_13440 PF14748 Pyrroline-5-carboxylate reductase dimerisation DEW08_13440 PF03807 NADP oxidoreductase coenzyme F420-dependent DEW08_13475 PF00109 Beta-ketoacyl synthase, N-terminal domain DEW08_13475 PF14765 Polyketide synthase dehydratase DEW08_13475 PF02801 Beta-ketoacyl synthase, C-terminal domain DEW08_13475 PF08659 KR domain DEW08_13475 PF00698 Acyl transferase domain DEW08_13475 PF08240 Alcohol dehydrogenase GroES-like domain DEW08_13475 PF16197 Ketoacyl-synthetase C-terminal extension DEW08_13475 PF00550 Phosphopantetheine attachment site DEW08_13485 PF02441 Flavoprotein DEW08_13490 PF00484 Carbonic anhydrase DEW08_13510 PF00365 Phosphofructokinase DEW08_13525 PF00731 AIR carboxylase DEW08_13530 PF17769 Phosphoribosylaminoimidazole carboxylase C-terminal domain DEW08_13530 PF02222 ATP-grasp domain DEW08_13535 PF00563 EAL domain DEW08_13535 PF05231 MASE1 DEW08_13550 PF00583 Acetyltransferase (GNAT) family DEW08_13560 PF10415 Fumarase C C-terminus DEW08_13560 PF00206 Lyase DEW08_13580 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD DEW08_13585 PF00069 Protein kinase domain DEW08_13585 PF03793 PASTA domain DEW08_13615 PF04168 A predicted alpha-helical domain with a conserved ER motif. DEW08_13615 PF14403 Circularly permuted ATP-grasp type 2 DEW08_13620 PF01841 Transglutaminase-like superfamily DEW08_13620 PF08379 Bacterial transglutaminase-like N-terminal region DEW08_13625 PF00486 Transcriptional regulatory protein, C terminal DEW08_13625 PF00072 Response regulator receiver domain DEW08_13630 PF00512 His Kinase A (phospho-acceptor) domain DEW08_13630 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DEW08_13630 PF02743 Cache domain DEW08_13635 PF03144 Elongation factor Tu domain 2 DEW08_13635 PF00009 Elongation factor Tu GTP binding domain DEW08_13635 PF16658 Class II release factor RF3, C-terminal domain DEW08_13640 PF01118 Semialdehyde dehydrogenase, NAD binding domain DEW08_13640 PF02774 Semialdehyde dehydrogenase, dimerisation domain DEW08_13645 PF00343 Carbohydrate phosphorylase DEW08_13655 PF08281 Sigma-70, region 4 DEW08_13655 PF04542 Sigma-70 region 2 DEW08_13675 PF05401 Nodulation protein S (NodS) DEW08_13685 PF04378 Ribosomal RNA large subunit methyltransferase D, RlmJ DEW08_13710 PF12802 MarR family DEW08_13715 PF00378 Enoyl-CoA hydratase/isomerase DEW08_13720 PF00781 Diacylglycerol kinase catalytic domain DEW08_13725 PF00149 Calcineurin-like phosphoesterase DEW08_13730 PF00490 Delta-aminolevulinic acid dehydratase DEW08_13735 PF05175 Methyltransferase small domain DEW08_13735 PF08468 Methyltransferase small domain N-terminal DEW08_13740 PF01668 SmpB protein DEW08_13745 PF00701 Dihydrodipicolinate synthetase family DEW08_13760 PF02618 YceG-like family DEW08_13765 PF02801 Beta-ketoacyl synthase, C-terminal domain DEW08_13765 PF00109 Beta-ketoacyl synthase, N-terminal domain DEW08_13770 PF00550 Phosphopantetheine attachment site DEW08_13780 PF00698 Acyl transferase domain DEW08_13790 PF01250 Ribosomal protein S6 DEW08_13795 PF01084 Ribosomal protein S18 DEW08_13805 PF01281 Ribosomal protein L9, N-terminal domain DEW08_13805 PF03948 Ribosomal protein L9, C-terminal domain DEW08_13815 PF00772 DnaB-like helicase N terminal domain DEW08_13815 PF03796 DnaB-like helicase C terminal domain DEW08_13820 PF00842 Alanine racemase, C-terminal domain DEW08_13820 PF01168 Alanine racemase, N-terminal domain DEW08_13825 PF02405 Permease MlaE DEW08_13830 PF00005 ABC transporter DEW08_13835 PF00860 Permease family DEW08_13845 PF00557 Metallopeptidase family M24 DEW08_13850 PF18073 Rubredoxin metal binding domain DEW08_13850 PF06745 KaiC DEW08_13860 PF13537 Glutamine amidotransferase domain DEW08_13860 PF00156 Phosphoribosyl transferase domain DEW08_13875 PF00072 Response regulator receiver domain DEW08_13885 PF01926 50S ribosome-binding GTPase DEW08_13885 PF14714 KH-domain-like of EngA bacterial GTPase enzymes, C-terminal DEW08_13900 PF00072 Response regulator receiver domain DEW08_13900 PF00196 Bacterial regulatory proteins, luxR family DEW08_13910 PF00196 Bacterial regulatory proteins, luxR family DEW08_13910 PF00072 Response regulator receiver domain DEW08_13930 PF02705 K+ potassium transporter DEW08_13935 PF00232 Glycosyl hydrolase family 1 DEW08_13945 PF14532 Sigma-54 interaction domain DEW08_13945 PF00072 Response regulator receiver domain DEW08_13945 PF02954 Bacterial regulatory protein, Fis family DEW08_13950 PF00072 Response regulator receiver domain DEW08_13950 PF00990 Diguanylate cyclase, GGDEF domain DEW08_13955 PF00155 Aminotransferase class I and II DEW08_13960 PF03186 CobD/Cbib protein DEW08_13965 PF07685 CobB/CobQ-like glutamine amidotransferase domain DEW08_13965 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain DEW08_13970 PF12557 Cob(I)alamin adenosyltransferase N terminal DEW08_13970 PF02572 ATP:corrinoid adenosyltransferase BtuR/CobO/CobP DEW08_13975 PF02283 Cobinamide kinase / cobinamide phosphate guanyltransferase DEW08_13990 PF00216 Bacterial DNA-binding protein DEW08_13995 PF02190 ATP-dependent protease La (LON) substrate-binding domain DEW08_13995 PF05362 Lon protease (S16) C-terminal proteolytic domain DEW08_13995 PF00004 ATPase family associated with various cellular activities (AAA) DEW08_14000 PF07724 AAA domain (Cdc48 subfamily) DEW08_14000 PF10431 C-terminal, D2-small domain, of ClpB protein DEW08_14000 PF06689 ClpX C4-type zinc finger DEW08_14005 PF00574 Clp protease DEW08_14010 PF05698 Bacterial trigger factor protein (TF) C-terminus DEW08_14010 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase DEW08_14010 PF05697 Bacterial trigger factor protein (TF) DEW08_14025 PF03853 YjeF-related protein N-terminus DEW08_14025 PF01256 Carbohydrate kinase DEW08_14035 PF00543 Nitrogen regulatory protein P-II DEW08_14060 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain DEW08_14060 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain DEW08_14065 PF03960 ArsC family DEW08_14070 PF05175 Methyltransferase small domain DEW08_14100 PF00873 AcrB/AcrD/AcrF family DEW08_14105 PF13533 Biotin-lipoyl like DEW08_14110 PF00440 Bacterial regulatory proteins, tetR family DEW08_14120 PF00072 Response regulator receiver domain DEW08_14120 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DEW08_14120 PF00512 His Kinase A (phospho-acceptor) domain DEW08_14120 PF08448 PAS fold DEW08_14120 PF13188 PAS domain DEW08_14125 PF01740 STAS domain DEW08_14130 PF00672 HAMP domain DEW08_14130 PF07228 Stage II sporulation protein E (SpoIIE) DEW08_14195 PF01368 DHH family DEW08_14195 PF17768 RecJ OB domain DEW08_14195 PF10141 Single-strand DNA-specific exonuclease, C terminal domain DEW08_14195 PF02272 DHHA1 domain DEW08_14200 PF00465 Iron-containing alcohol dehydrogenase DEW08_14205 PF03320 Bacterial fructose-1,6-bisphosphatase, glpX-encoded DEW08_14215 PF00155 Aminotransferase class I and II DEW08_14230 PF00392 Bacterial regulatory proteins, gntR family DEW08_14230 PF00155 Aminotransferase class I and II DEW08_14240 PF00691 OmpA family DEW08_14245 PF00132 Bacterial transferase hexapeptide (six repeats) DEW08_14250 PF01118 Semialdehyde dehydrogenase, NAD binding domain DEW08_14250 PF02774 Semialdehyde dehydrogenase, dimerisation domain DEW08_14255 PF00380 Ribosomal protein S9/S16 DEW08_14260 PF00572 Ribosomal protein L13 DEW08_14270 PF00378 Enoyl-CoA hydratase/isomerase DEW08_14275 PF13380 CoA binding domain DEW08_14280 PF01053 Cys/Met metabolism PLP-dependent enzyme DEW08_14285 PF00106 short chain dehydrogenase DEW08_14315 PF03601 Conserved hypothetical protein 698 DEW08_14330 PF03193 RsgA GTPase DEW08_14345 PF00512 His Kinase A (phospho-acceptor) domain DEW08_14345 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DEW08_14345 PF02743 Cache domain DEW08_14350 PF02934 GatB/GatE catalytic domain DEW08_14350 PF02637 GatB domain DEW08_14365 PF01425 Amidase DEW08_14370 PF02686 Glu-tRNAGln amidotransferase C subunit DEW08_14380 PF03652 Holliday junction resolvase DEW08_14390 PF13473 Cupredoxin-like domain DEW08_14410 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family DEW08_14410 PF03466 LysR substrate binding domain DEW08_14415 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain DEW08_14415 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain DEW08_14420 PF01979 Amidohydrolase family DEW08_14425 PF02660 Glycerol-3-phosphate acyltransferase DEW08_14435 PF10017 Histidine-specific methyltransferase, SAM-dependent DEW08_14440 PF12867 DinB superfamily DEW08_14440 PF03781 Sulfatase-modifying factor enzyme 1 DEW08_14445 PF00106 short chain dehydrogenase DEW08_14450 PF00563 EAL domain DEW08_14450 PF03707 Bacterial signalling protein N terminal repeat DEW08_14450 PF00990 Diguanylate cyclase, GGDEF domain DEW08_14475 PF01544 CorA-like Mg2+ transporter protein DEW08_14490 PF13442 Cytochrome C oxidase, cbb3-type, subunit III DEW08_14490 PF00034 Cytochrome c DEW08_14490 PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase DEW08_14500 PF03641 Possible lysine decarboxylase DEW08_14505 PF00180 Isocitrate/isopropylmalate dehydrogenase DEW08_14520 PF06055 Exopolysaccharide synthesis, ExoD DEW08_14535 PF08281 Sigma-70, region 4 DEW08_14535 PF04542 Sigma-70 region 2 DEW08_14540 PF18324 Hypothetical protein TT1725 DEW08_14540 PF00180 Isocitrate/isopropylmalate dehydrogenase DEW08_14560 PF04607 Region found in RelA / SpoT proteins DEW08_14560 PF02824 TGS domain DEW08_14560 PF13291 ACT domain DEW08_14565 PF11614 IG-like fold at C-terminal of FixG, putative oxidoreductase DEW08_14565 PF12801 4Fe-4S binding domain DEW08_14565 PF13746 4Fe-4S dicluster domain DEW08_14575 PF00004 ATPase family associated with various cellular activities (AAA) DEW08_14575 PF01434 Peptidase family M41 DEW08_14575 PF06480 FtsH Extracellular DEW08_14575 PF17862 AAA+ lid domain DEW08_14580 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain DEW08_14580 PF00672 HAMP domain DEW08_14585 PF02481 DNA recombination-mediator protein A DEW08_14585 PF17782 DprA winged helix domain DEW08_14605 PF00773 RNB domain DEW08_14605 PF08206 Ribonuclease B OB domain DEW08_14605 PF08461 Ribonuclease R winged-helix domain DEW08_14605 PF17876 Cold shock domain DEW08_14605 PF00575 S1 RNA binding domain DEW08_14610 PF13180 PDZ domain DEW08_14610 PF03572 Peptidase family S41 DEW08_14615 PF00471 Ribosomal protein L33 DEW08_14620 PF00072 Response regulator receiver domain DEW08_14620 PF00990 Diguanylate cyclase, GGDEF domain DEW08_14625 PF00072 Response regulator receiver domain DEW08_14630 PF00512 His Kinase A (phospho-acceptor) domain DEW08_14630 PF00360 Phytochrome region DEW08_14630 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DEW08_14630 PF08446 PAS fold DEW08_14630 PF01590 GAF domain DEW08_14635 PF08448 PAS fold DEW08_14635 PF13426 PAS domain DEW08_14635 PF05231 MASE1 DEW08_14635 PF00990 Diguanylate cyclase, GGDEF domain DEW08_14635 PF00563 EAL domain DEW08_14635 PF08447 PAS fold DEW08_14640 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain DEW08_14640 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain DEW08_14655 PF01336 OB-fold nucleic acid binding domain DEW08_14655 PF02938 GAD domain DEW08_14655 PF00152 tRNA synthetases class II (D, K and N) DEW08_14660 PF00570 HRDC domain DEW08_14660 PF01612 3'-5' exonuclease DEW08_14690 PF05974 Domain of unknown function (DUF892) DEW08_14695 PF00999 Sodium/hydrogen exchanger family DEW08_14700 PF03466 LysR substrate binding domain DEW08_14700 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family DEW08_14715 PF00982 Glycosyltransferase family 20 DEW08_14725 PF03167 Uracil DNA glycosylase superfamily DEW08_14730 PF01329 Pterin 4 alpha carbinolamine dehydratase DEW08_14735 PF02525 Flavodoxin-like fold DEW08_14740 PF13230 Glutamine amidotransferases class-II DEW08_14745 PF03960 ArsC family DEW08_14750 PF03747 ADP-ribosylglycohydrolase DEW08_14760 PF00182 Chitinase class I DEW08_14770 PF00142 4Fe-4S iron sulfur cluster binding proteins, NifH/frxC family DEW08_14775 PF00148 Nitrogenase component 1 type Oxidoreductase DEW08_14780 PF00148 Nitrogenase component 1 type Oxidoreductase DEW08_14780 PF11844 Domain of unknown function (DUF3364) DEW08_14785 PF02743 Cache domain DEW08_14785 PF00672 HAMP domain DEW08_14785 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain DEW08_14790 PF03458 UPF0126 domain DEW08_14795 PF04324 BFD-like [2Fe-2S] binding domain DEW08_14795 PF00148 Nitrogenase component 1 type Oxidoreductase DEW08_14800 PF00148 Nitrogenase component 1 type Oxidoreductase DEW08_14805 PF02579 Dinitrogenase iron-molybdenum cofactor DEW08_14810 PF03270 Protein of unknown function, DUF269 DEW08_14815 PF05082 Rop-like DEW08_14820 PF13237 4Fe-4S dicluster domain DEW08_14825 PF00561 alpha/beta hydrolase fold DEW08_14840 PF01521 Iron-sulphur cluster biosynthesis DEW08_14845 PF01106 NifU-like domain DEW08_14845 PF01592 NifU-like N terminal domain DEW08_14845 PF04324 BFD-like [2Fe-2S] binding domain DEW08_14850 PF00266 Aminotransferase class-V DEW08_14855 PF00682 HMGL-like DEW08_14860 PF00132 Bacterial transferase hexapeptide (six repeats) DEW08_14865 PF03206 Nitrogen fixation protein NifW DEW08_14895 PF01012 Electron transfer flavoprotein domain DEW08_14900 PF00072 Response regulator receiver domain DEW08_14900 PF01627 Hpt domain DEW08_14900 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) DEW08_14900 PF00512 His Kinase A (phospho-acceptor) domain DEW08_14900 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DEW08_14900 PF00672 HAMP domain DEW08_14925 PF00313 'Cold-shock' DNA-binding domain DEW08_14930 PF07992 Pyridine nucleotide-disulphide oxidoreductase DEW08_14935 PF00724 NADH:flavin oxidoreductase / NADH oxidase family DEW08_14950 PF13456 Reverse transcriptase-like DEW08_14950 PF00300 Histidine phosphatase superfamily (branch 1) DEW08_14955 PF01256 Carbohydrate kinase DEW08_14970 PF02464 Competence-damaged protein DEW08_14970 PF00994 Probable molybdopterin binding domain DEW08_14980 PF00557 Metallopeptidase family M24 DEW08_14985 PF04002 RadC-like JAB domain DEW08_14990 PF13411 MerR HTH family regulatory protein DEW08_15000 PF00206 Lyase DEW08_15000 PF10397 Adenylosuccinate lyase C-terminus DEW08_15020 PF01259 SAICAR synthetase DEW08_15025 PF02700 Phosphoribosylformylglycinamidine (FGAM) synthase DEW08_15040 PF03475 3-alpha domain DEW08_15040 PF03473 MOSC domain DEW08_15045 PF00672 HAMP domain DEW08_15045 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain DEW08_15050 PF00909 Ammonium Transporter Family DEW08_15070 PF00586 AIR synthase related protein, N-terminal domain DEW08_15070 PF18072 Formylglycinamide ribonucleotide amidotransferase linker domain DEW08_15070 PF02769 AIR synthase related protein, C-terminal domain DEW08_15080 PF00462 Glutaredoxin DEW08_15085 PF00892 EamA-like transporter family DEW08_15090 PF00440 Bacterial regulatory proteins, tetR family DEW08_15095 PF00724 NADH:flavin oxidoreductase / NADH oxidase family DEW08_15105 PF03466 LysR substrate binding domain DEW08_15105 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family DEW08_15110 PF08502 LeuA allosteric (dimerisation) domain DEW08_15110 PF00682 HMGL-like DEW08_15125 PF06114 IrrE N-terminal-like domain DEW08_15125 PF09856 Predicted transcriptional regulator (DUF2083) DEW08_15125 PF01381 Helix-turn-helix DEW08_15130 PF07995 Glucose / Sorbosone dehydrogenase DEW08_15135 PF01479 S4 domain DEW08_15135 PF00163 Ribosomal protein S4/S9 N-terminal domain DEW08_15145 PF02522 Aminoglycoside 3-N-acetyltransferase DEW08_15150 PF09190 DALR domain DEW08_15150 PF01406 tRNA synthetases class I (C) catalytic domain DEW08_15155 PF00749 tRNA synthetases class I (E and Q), catalytic domain DEW08_15170 PF02540 NAD synthase DEW08_15170 PF00795 Carbon-nitrogen hydrolase DEW08_15180 PF13808 DDE_Tnp_1-associated DEW08_15180 PF01609 Transposase DDE domain DEW08_15190 PF00144 Beta-lactamase DEW08_15200 PF00535 Glycosyl transferase family 2 DEW08_15210 PF02810 SEC-C motif DEW08_15220 PF06508 Queuosine biosynthesis protein QueC DEW08_15245 PF00829 Ribosomal prokaryotic L21 protein DEW08_15250 PF01016 Ribosomal L27 protein DEW08_15255 PF01926 50S ribosome-binding GTPase DEW08_15255 PF01018 GTP1/OBG DEW08_15260 PF00696 Amino acid kinase family DEW08_15260 PF01472 PUA domain DEW08_15270 PF13419 Haloacid dehalogenase-like hydrolase DEW08_15275 PF01925 Sulfite exporter TauE/SafE DEW08_15280 PF13442 Cytochrome C oxidase, cbb3-type, subunit III DEW08_15280 PF00034 Cytochrome c DEW08_15280 PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase DEW08_15285 PF00171 Aldehyde dehydrogenase family DEW08_15290 PF01467 Cytidylyltransferase-like DEW08_15300 PF02590 Predicted SPOUT methyltransferase DEW08_15315 PF03572 Peptidase family S41 DEW08_15315 PF13180 PDZ domain DEW08_15325 PF00293 NUDIX domain DEW08_15340 PF01584 CheW-like domain DEW08_15340 PF02895 Signal transducing histidine kinase, homodimeric domain DEW08_15340 PF01627 Hpt domain DEW08_15340 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DEW08_15345 PF01584 CheW-like domain DEW08_15350 PF02203 Tar ligand binding domain homologue DEW08_15350 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain DEW08_15350 PF00672 HAMP domain DEW08_15355 PF01739 CheR methyltransferase, SAM binding domain DEW08_15355 PF03705 CheR methyltransferase, all-alpha domain DEW08_15360 PF03975 CheD chemotactic sensory transduction DEW08_15365 PF00072 Response regulator receiver domain DEW08_15365 PF01339 CheB methylesterase DEW08_15370 PF02743 Cache domain DEW08_15370 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain DEW08_15370 PF00672 HAMP domain DEW08_15375 PF01740 STAS domain DEW08_15385 PF00072 Response regulator receiver domain DEW08_15385 PF00990 Diguanylate cyclase, GGDEF domain DEW08_15390 PF00072 Response regulator receiver domain DEW08_15390 PF00990 Diguanylate cyclase, GGDEF domain DEW08_15400 PF00072 Response regulator receiver domain DEW08_15420 PF00072 Response regulator receiver domain DEW08_15420 PF00486 Transcriptional regulatory protein, C terminal DEW08_15430 PF01740 STAS domain DEW08_15435 PF00512 His Kinase A (phospho-acceptor) domain DEW08_15435 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DEW08_15435 PF00497 Bacterial extracellular solute-binding proteins, family 3 DEW08_15445 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) DEW08_15445 PF01627 Hpt domain DEW08_15445 PF00512 His Kinase A (phospho-acceptor) domain DEW08_15445 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DEW08_15445 PF00672 HAMP domain DEW08_15445 PF00072 Response regulator receiver domain DEW08_15450 PF07044 Protein of unknown function (DUF1329) DEW08_15460 PF02823 ATP synthase, Delta/Epsilon chain, beta-sandwich domain DEW08_15465 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain DEW08_15465 PF02874 ATP synthase alpha/beta family, beta-barrel domain DEW08_15470 PF00231 ATP synthase DEW08_15475 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain DEW08_15475 PF02874 ATP synthase alpha/beta family, beta-barrel domain DEW08_15475 PF00306 ATP synthase alpha/beta chain, C terminal domain DEW08_15480 PF00213 ATP synthase delta (OSCP) subunit DEW08_15495 PF18074 Primosomal protein N C-terminal domain DEW08_15495 PF17764 3′ DNA-binding domain (3′BD) DEW08_15495 PF00270 DEAD/DEAH box helicase DEW08_15495 PF18319 PriA DNA helicase Cys-rich region (CRR) domain DEW08_15500 PF00923 Transaldolase/Fructose-6-phosphate aldolase DEW08_15510 PF02899 Phage integrase, N-terminal SAM-like domain DEW08_15510 PF00589 Phage integrase family DEW08_15530 PF07992 Pyridine nucleotide-disulphide oxidoreductase DEW08_15530 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain DEW08_15565 PF00162 Phosphoglycerate kinase DEW08_15585 PF12170 DNA polymerase III tau subunit V interacting with alpha DEW08_15585 PF12168 DNA polymerase III subunits tau domain IV DnaB-binding DEW08_15585 PF12169 DNA polymerase III subunits gamma and tau domain III DEW08_15590 PF02575 YbaB/EbfC DNA-binding family DEW08_15595 PF13662 Toprim domain DEW08_15595 PF02132 RecR protein DEW08_15600 PF00034 Cytochrome c DEW08_15605 PF02348 Cytidylyltransferase DEW08_15610 PF00800 Prephenate dehydratase DEW08_15610 PF01842 ACT domain DEW08_15620 PF00293 NUDIX domain DEW08_15620 PF09296 NADH pyrophosphatase-like rudimentary NUDIX domain DEW08_15620 PF09297 NADH pyrophosphatase zinc ribbon domain DEW08_15625 PF00459 Inositol monophosphatase family DEW08_15635 PF00144 Beta-lactamase DEW08_15660 PF00348 Polyprenyl synthetase DEW08_15670 PF05175 Methyltransferase small domain DEW08_15675 PF00583 Acetyltransferase (GNAT) family DEW08_15680 PF13443 Cro/C1-type HTH DNA-binding domain DEW08_15695 PF06965 Na+/H+ antiporter 1 DEW08_15695 PF01343 Peptidase family S49 DEW08_15715 PF02091 Glycyl-tRNA synthetase alpha subunit DEW08_15720 PF02092 Glycyl-tRNA synthetase beta subunit DEW08_15720 PF05746 DALR anticodon binding domain DEW08_15765 PF03477 ATP cone domain DEW08_15770 PF00464 Serine hydroxymethyltransferase DEW08_15775 PF02502 Ribose/Galactose Isomerase DEW08_15795 PF05974 Domain of unknown function (DUF892) DEW08_15810 PF13673 Acetyltransferase (GNAT) domain DEW08_15825 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DEW08_15825 PF13426 PAS domain DEW08_15825 PF00072 Response regulator receiver domain DEW08_15840 PF01734 Patatin-like phospholipase DEW08_15855 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain DEW08_15855 PF16591 Helical bimodular sensor domain DEW08_15855 PF00672 HAMP domain DEW08_15890 PF05099 Tellurite resistance protein TerB DEW08_15890 PF00226 DnaJ domain DEW08_15905 PF00892 EamA-like transporter family DEW08_15910 PF01510 N-acetylmuramoyl-L-alanine amidase DEW08_15915 PF05685 Putative restriction endonuclease DEW08_15925 PF02381 MraZ protein, putative antitoxin-like DEW08_15930 PF01795 MraW methylase family DEW08_15940 PF03717 Penicillin-binding Protein dimerisation domain DEW08_15940 PF00905 Penicillin binding protein transpeptidase domain DEW08_15945 PF08245 Mur ligase middle domain DEW08_15945 PF01225 Mur ligase family, catalytic domain DEW08_15945 PF02875 Mur ligase family, glutamate ligase domain DEW08_15950 PF08245 Mur ligase middle domain DEW08_15950 PF02875 Mur ligase family, glutamate ligase domain DEW08_15950 PF01225 Mur ligase family, catalytic domain DEW08_15955 PF10555 Phospho-N-acetylmuramoyl-pentapeptide-transferase signature 1 DEW08_15955 PF00953 Glycosyl transferase family 4 DEW08_15960 PF08245 Mur ligase middle domain DEW08_15970 PF04101 Glycosyltransferase family 28 C-terminal domain DEW08_15970 PF03033 Glycosyltransferase family 28 N-terminal domain DEW08_15980 PF02875 Mur ligase family, glutamate ligase domain DEW08_15980 PF08245 Mur ligase middle domain DEW08_15980 PF01225 Mur ligase family, catalytic domain DEW08_15985 PF02873 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain DEW08_15985 PF01565 FAD binding domain DEW08_15990 PF01820 D-ala D-ala ligase N-terminus DEW08_15990 PF07478 D-ala D-ala ligase C-terminus DEW08_15995 PF08478 POTRA domain, FtsQ-type DEW08_15995 PF03799 Cell division protein FtsQ DEW08_16000 PF02491 SHS2 domain inserted in FTSA DEW08_16005 PF12327 FtsZ family, C-terminal domain DEW08_16005 PF00091 Tubulin/FtsZ family, GTPase domain DEW08_16010 PF03331 UDP-3-O-acyl N-acetylglycosamine deacetylase DEW08_16015 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain DEW08_16035 PF02463 RecF/RecN/SMC N terminal domain DEW08_16040 PF13525 Outer membrane lipoprotein DEW08_16055 PF00072 Response regulator receiver domain DEW08_16060 PF01321 Creatinase/Prolidase N-terminal domain DEW08_16060 PF01321 Creatinase/Prolidase N-terminal domain DEW08_16060 PF00557 Metallopeptidase family M24 DEW08_16060 PF00557 Metallopeptidase family M24 DEW08_16095 PF00072 Response regulator receiver domain DEW08_16095 PF00196 Bacterial regulatory proteins, luxR family DEW08_16100 PF00196 Bacterial regulatory proteins, luxR family DEW08_16100 PF00072 Response regulator receiver domain DEW08_16130 PF00264 Common central domain of tyrosinase DEW08_16135 PF00561 alpha/beta hydrolase fold DEW08_16135 PF00106 short chain dehydrogenase DEW08_16140 PF09335 SNARE associated Golgi protein DEW08_16165 PF02600 Disulfide bond formation protein DsbB DEW08_16175 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DEW08_16175 PF00512 His Kinase A (phospho-acceptor) domain DEW08_16180 PF00749 tRNA synthetases class I (E and Q), catalytic domain DEW08_16190 PF00588 SpoU rRNA Methylase family DEW08_16190 PF08032 RNA 2'-O ribose methyltransferase substrate binding DEW08_16200 PF01625 Peptide methionine sulfoxide reductase DEW08_16220 PF09397 Ftsk gamma domain DEW08_16220 PF01580 FtsK/SpoIIIE family DEW08_16220 PF13491 4TM region of DNA translocase FtsK/SpoIIIE DEW08_16220 PF17854 FtsK alpha domain DEW08_16235 PF02308 MgtC family DEW08_16240 PF00512 His Kinase A (phospho-acceptor) domain DEW08_16240 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DEW08_16260 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain DEW08_16260 PF02787 Carbamoyl-phosphate synthetase large chain, oligomerisation domain DEW08_16260 PF02142 MGS-like domain DEW08_16265 PF01272 Transcription elongation factor, GreA/GreB, C-term DEW08_16265 PF03449 Transcription elongation factor, N-terminal DEW08_16285 PF01037 Lrp/AsnC ligand binding domain DEW08_16290 PF06258 Mitochondrial fission ELM1 DEW08_16315 PF07992 Pyridine nucleotide-disulphide oxidoreductase DEW08_16320 PF00210 Ferritin-like domain DEW08_16325 PF00672 HAMP domain DEW08_16325 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain DEW08_16330 PF00672 HAMP domain DEW08_16330 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain DEW08_16330 PF17200 Single Cache domain 2 DEW08_16335 PF00009 Elongation factor Tu GTP binding domain DEW08_16335 PF14492 Elongation Factor G, domain II DEW08_16335 PF00679 Elongation factor G C-terminus DEW08_16335 PF03764 Elongation factor G, domain IV DEW08_16355 PF00563 EAL domain DEW08_16355 PF00990 Diguanylate cyclase, GGDEF domain DEW08_16355 PF03707 Bacterial signalling protein N terminal repeat DEW08_16400 PF01063 Amino-transferase class IV DEW08_16410 PF13085 2Fe-2S iron-sulfur cluster binding domain DEW08_16410 PF13237 4Fe-4S dicluster domain DEW08_16415 PF00890 FAD binding domain DEW08_16415 PF02910 Fumarate reductase flavoprotein C-term DEW08_16425 PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit DEW08_16435 PF02774 Semialdehyde dehydrogenase, dimerisation domain DEW08_16435 PF01118 Semialdehyde dehydrogenase, NAD binding domain DEW08_16450 PF03547 Membrane transport protein DEW08_16455 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain DEW08_16455 PF00672 HAMP domain DEW08_16460 PF00929 Exonuclease DEW08_16460 PF13307 Helicase C-terminal domain DEW08_16460 PF04851 Type III restriction enzyme, res subunit DEW08_16470 PF00912 Transglycosylase DEW08_16480 PF00893 Small Multidrug Resistance protein DEW08_16485 PF01921 tRNA synthetases class I (K) DEW08_16505 PF02866 lactate/malate dehydrogenase, alpha/beta C-terminal domain DEW08_16505 PF00056 lactate/malate dehydrogenase, NAD binding domain DEW08_16510 PF00549 CoA-ligase DEW08_16510 PF08442 ATP-grasp domain DEW08_16515 PF00549 CoA-ligase DEW08_16515 PF02629 CoA binding domain DEW08_16520 PF16078 2-oxoglutarate dehydrogenase N-terminus DEW08_16520 PF00676 Dehydrogenase E1 component DEW08_16520 PF16870 2-oxoglutarate dehydrogenase C-terminal DEW08_16520 PF02779 Transketolase, pyrimidine binding domain DEW08_16525 PF00364 Biotin-requiring enzyme DEW08_16525 PF02817 e3 binding domain DEW08_16525 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) DEW08_16535 PF00155 Aminotransferase class I and II DEW08_16535 PF00392 Bacterial regulatory proteins, gntR family DEW08_16540 PF03969 AFG1-like ATPase DEW08_16550 PF08543 Phosphomethylpyrimidine kinase DEW08_16560 PF03328 HpcH/HpaI aldolase/citrate lyase family DEW08_16570 PF00180 Isocitrate/isopropylmalate dehydrogenase DEW08_16575 PF00694 Aconitase C-terminal domain DEW08_16600 PF01678 Diaminopimelate epimerase DEW08_16615 PF04055 Radical SAM superfamily DEW08_16615 PF00919 Uncharacterized protein family UPF0004 DEW08_16625 PF00912 Transglycosylase DEW08_16625 PF00905 Penicillin binding protein transpeptidase domain DEW08_16635 PF00528 Binding-protein-dependent transport system inner membrane component DEW08_16660 PF02798 Glutathione S-transferase, N-terminal domain DEW08_16670 PF04055 Radical SAM superfamily DEW08_16680 PF06965 Na+/H+ antiporter 1 DEW08_16710 PF00707 Translation initiation factor IF-3, C-terminal domain DEW08_16710 PF05198 Translation initiation factor IF-3, N-terminal domain DEW08_16715 PF02824 TGS domain DEW08_16715 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain DEW08_16715 PF03129 Anticodon binding domain DEW08_16715 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) DEW08_16725 PF01180 Dihydroorotate dehydrogenase DEW08_16750 PF00353 RTX calcium-binding nonapeptide repeat (4 copies) DEW08_16750 PF12708 Pectate lyase superfamily protein DEW08_16750 PF13229 Right handed beta helix region DEW08_16790 PF00872 Transposase, Mutator family DEW08_16800 PF02796 Helix-turn-helix domain of resolvase DEW08_16800 PF00239 Resolvase, N terminal domain DEW08_16895 PF00043 Glutathione S-transferase, C-terminal domain DEW08_16895 PF02798 Glutathione S-transferase, N-terminal domain DEW08_16905 PF08402 TOBE domain DEW08_16905 PF00005 ABC transporter DEW08_16910 PF00528 Binding-protein-dependent transport system inner membrane component DEW08_16915 PF00528 Binding-protein-dependent transport system inner membrane component DEW08_16920 PF13416 Bacterial extracellular solute-binding protein DEW08_16950 PF02308 MgtC family DEW08_16955 PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain DEW08_16955 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain DEW08_16995 PF03966 Trm112p-like protein DEW08_17000 PF02190 ATP-dependent protease La (LON) substrate-binding domain DEW08_17000 PF05362 Lon protease (S16) C-terminal proteolytic domain DEW08_17000 PF00004 ATPase family associated with various cellular activities (AAA) DEW08_17005 PF00085 Thioredoxin DEW08_17010 PF04073 Aminoacyl-tRNA editing domain DEW08_17020 PF03737 Aldolase/RraA DEW08_17035 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain DEW08_17035 PF00672 HAMP domain DEW08_17050 PF01970 Tripartite tricarboxylate transporter TctA family DEW08_17075 PF02142 MGS-like domain DEW08_17075 PF01808 AICARFT/IMPCHase bienzyme DEW08_17100 PF01189 16S rRNA methyltransferase RsmB/F DEW08_17100 PF01029 NusB family DEW08_17115 PF01435 Peptidase family M48 DEW08_17120 PF07896 Protein of unknown function (DUF1674) DEW08_17125 PF00753 Metallo-beta-lactamase superfamily DEW08_17130 PF00814 Glycoprotease family DEW08_17140 PF01210 NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus DEW08_17140 PF07479 NAD-dependent glycerol-3-phosphate dehydrogenase C-terminus DEW08_17160 PF16177 Acetyl-coenzyme A synthetase N-terminus DEW08_17160 PF13193 AMP-binding enzyme C-terminal domain DEW08_17160 PF00501 AMP-binding enzyme DEW08_17165 PF02224 Cytidylate kinase DEW08_17170 PF00575 S1 RNA binding domain DEW08_17175 PF02954 Bacterial regulatory protein, Fis family DEW08_17175 PF00072 Response regulator receiver domain DEW08_17175 PF00158 Sigma-54 interaction domain DEW08_17180 PF08918 PhoQ Sensor DEW08_17180 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DEW08_17185 PF00486 Transcriptional regulatory protein, C terminal DEW08_17185 PF00072 Response regulator receiver domain DEW08_17205 PF13746 4Fe-4S dicluster domain DEW08_17205 PF11614 IG-like fold at C-terminal of FixG, putative oxidoreductase DEW08_17205 PF12801 4Fe-4S binding domain DEW08_17225 PF02669 K+-transporting ATPase, c chain DEW08_17235 PF00072 Response regulator receiver domain DEW08_17235 PF00486 Transcriptional regulatory protein, C terminal DEW08_17250 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) DEW08_17255 PF05958 tRNA (Uracil-5-)-methyltransferase DEW08_17255 PF01938 TRAM domain DEW08_17260 PF01379 Porphobilinogen deaminase, dipyromethane cofactor binding domain DEW08_17260 PF03900 Porphobilinogen deaminase, C-terminal domain DEW08_17275 PF00375 Sodium:dicarboxylate symporter family DEW08_17285 PF00072 Response regulator receiver domain DEW08_17285 PF00158 Sigma-54 interaction domain DEW08_17285 PF02954 Bacterial regulatory protein, Fis family DEW08_17305 PF01590 GAF domain DEW08_17305 PF00360 Phytochrome region DEW08_17305 PF00990 Diguanylate cyclase, GGDEF domain DEW08_17305 PF00563 EAL domain DEW08_17310 PF00072 Response regulator receiver domain DEW08_17310 PF00512 His Kinase A (phospho-acceptor) domain DEW08_17310 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) DEW08_17310 PF01627 Hpt domain DEW08_17310 PF00672 HAMP domain DEW08_17310 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DEW08_17320 PF01266 FAD dependent oxidoreductase DEW08_17325 PF00011 Hsp20/alpha crystallin family DEW08_17350 PF10609 NUBPL iron-transfer P-loop NTPase DEW08_17350 PF01883 Iron-sulfur cluster assembly protein DEW08_17365 PF13488 Glycine zipper DEW08_17365 PF00691 OmpA family DEW08_17420 PF00330 Aconitase family (aconitate hydratase) DEW08_17420 PF00694 Aconitase C-terminal domain DEW08_17430 PF00571 CBS domain DEW08_17435 PF11154 Protein of unknown function (DUF2934) DEW08_17435 PF00430 ATP synthase B/B' CF(0) DEW08_17450 PF00118 TCP-1/cpn60 chaperonin family DEW08_17455 PF00166 Chaperonin 10 Kd subunit DEW08_17460 PF06233 Usg-like family DEW08_17465 PF02628 Cytochrome oxidase assembly protein DEW08_17480 PF13091 PLD-like domain DEW08_17480 PF13396 Phospholipase_D-nuclease N-terminal DEW08_17495 PF00005 ABC transporter DEW08_17495 PF08352 Oligopeptide/dipeptide transporter, C-terminal region DEW08_17500 PF01965 DJ-1/PfpI family DEW08_17505 PF00463 Isocitrate lyase family DEW08_17510 PF01381 Helix-turn-helix DEW08_17510 PF06114 IrrE N-terminal-like domain DEW08_17510 PF09856 Predicted transcriptional regulator (DUF2083) DEW08_17515 PF00175 Oxidoreductase NAD-binding domain DEW08_17515 PF00970 Oxidoreductase FAD-binding domain DEW08_17530 PF00156 Phosphoribosyl transferase domain DEW08_17535 PF11849 Domain of unknown function (DUF3369) DEW08_17545 PF00924 Mechanosensitive ion channel DEW08_17555 PF00174 Oxidoreductase molybdopterin binding domain DEW08_17560 PF01558 Pyruvate ferredoxin/flavodoxin oxidoreductase DEW08_17560 PF17147 Pyruvate:ferredoxin oxidoreductase core domain II DEW08_17560 PF01855 Pyruvate flavodoxin/ferredoxin oxidoreductase, thiamine diP-bdg DEW08_17565 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain DEW08_17575 PF00497 Bacterial extracellular solute-binding proteins, family 3 DEW08_17580 PF00072 Response regulator receiver domain DEW08_17580 PF00672 HAMP domain DEW08_17580 PF01627 Hpt domain DEW08_17580 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) DEW08_17580 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DEW08_17580 PF00512 His Kinase A (phospho-acceptor) domain DEW08_17585 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DEW08_17585 PF00512 His Kinase A (phospho-acceptor) domain DEW08_17620 PF02367 Threonylcarbamoyl adenosine biosynthesis protein TsaE DEW08_17630 PF12804 MobA-like NTP transferase domain DEW08_17655 PF00085 Thioredoxin DEW08_17665 PF03918 Cytochrome C biogenesis protein DEW08_17670 PF08534 Redoxin DEW08_17675 PF16327 Cytochrome c-type biogenesis protein CcmF C-terminal DEW08_17675 PF01578 Cytochrome C assembly protein DEW08_17680 PF03100 CcmE DEW08_17690 PF01578 Cytochrome C assembly protein DEW08_17700 PF01329 Pterin 4 alpha carbinolamine dehydratase DEW08_17705 PF01729 Quinolinate phosphoribosyl transferase, C-terminal domain DEW08_17705 PF02749 Quinolinate phosphoribosyl transferase, N-terminal domain DEW08_17715 PF00763 Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain DEW08_17715 PF02882 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain DEW08_17720 PF02594 Uncharacterised ACR, YggU family COG1872 DEW08_17725 PF02325 YGGT family DEW08_17735 PF00255 Glutathione peroxidase DEW08_17740 PF00528 Binding-protein-dependent transport system inner membrane component DEW08_17745 PF00528 Binding-protein-dependent transport system inner membrane component DEW08_17750 PF00497 Bacterial extracellular solute-binding proteins, family 3 DEW08_17755 PF00005 ABC transporter DEW08_17760 PF02080 TrkA-C domain DEW08_17760 PF06826 Predicted Permease Membrane Region DEW08_17770 PF00005 ABC transporter DEW08_17775 PF03379 CcmB protein DEW08_17780 PF03167 Uracil DNA glycosylase superfamily DEW08_17785 PF02146 Sir2 family DEW08_17790 PF01451 Low molecular weight phosphotyrosine protein phosphatase DEW08_17805 PF00892 EamA-like transporter family DEW08_17825 PF00764 Arginosuccinate synthase DEW08_17840 PF00989 PAS fold DEW08_17840 PF00512 His Kinase A (phospho-acceptor) domain DEW08_17840 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DEW08_17845 PF04055 Radical SAM superfamily DEW08_17855 PF04545 Sigma-70, region 4 DEW08_17855 PF04542 Sigma-70 region 2 DEW08_17885 PF00183 Hsp90 protein DEW08_17900 PF01479 S4 domain DEW08_17905 PF03741 Integral membrane protein TerC family DEW08_17910 PF00571 CBS domain DEW08_17910 PF01380 SIS domain DEW08_17915 PF06779 Uncharacterised MFS-type transporter YbfB DEW08_17920 PF03466 LysR substrate binding domain DEW08_17920 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family DEW08_17925 PF00037 4Fe-4S binding domain DEW08_17925 PF11953 Domain of unknown function (DUF3470) DEW08_17940 PF00140 Sigma-70 factor, region 1.2 DEW08_17940 PF04545 Sigma-70, region 4 DEW08_17940 PF04542 Sigma-70 region 2 DEW08_17945 PF00672 HAMP domain DEW08_17945 PF02743 Cache domain DEW08_17945 PF00211 Adenylate and Guanylate cyclase catalytic domain DEW08_17950 PF01435 Peptidase family M48 DEW08_17960 PF00561 alpha/beta hydrolase fold DEW08_17965 PF01632 Ribosomal protein L35 DEW08_17970 PF00453 Ribosomal protein L20 DEW08_17975 PF02912 Aminoacyl tRNA synthetase class II, N-terminal domain DEW08_17975 PF01409 tRNA synthetases class II core domain (F) DEW08_17980 PF03483 B3/4 domain DEW08_17980 PF03484 tRNA synthetase B5 domain DEW08_17980 PF03147 Ferredoxin-fold anticodon binding domain DEW08_17980 PF01588 Putative tRNA binding domain DEW08_17980 PF17759 Phenylalanyl tRNA synthetase beta chain CLM domain DEW08_18000 PF03466 LysR substrate binding domain DEW08_18000 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family DEW08_18010 PF00679 Elongation factor G C-terminus DEW08_18010 PF00009 Elongation factor Tu GTP binding domain DEW08_18010 PF03144 Elongation factor Tu domain 2 DEW08_18010 PF06421 GTP-binding protein LepA C-terminus DEW08_18015 PF08323 Starch synthase catalytic domain DEW08_18015 PF00534 Glycosyl transferases group 1 DEW08_18025 PF00909 Ammonium Transporter Family DEW08_18040 PF01475 Ferric uptake regulator family DEW08_18060 PF12680 SnoaL-like domain DEW08_18060 PF08281 Sigma-70, region 4 DEW08_18060 PF04542 Sigma-70 region 2 DEW08_18065 PF02627 Carboxymuconolactone decarboxylase family DEW08_18080 PF00899 ThiF family DEW08_18090 PF00291 Pyridoxal-phosphate dependent enzyme DEW08_18095 PF02082 Transcriptional regulator DEW08_18100 PF00692 dUTPase DEW08_18105 PF04127 DNA / pantothenate metabolism flavoprotein DEW08_18105 PF02441 Flavoprotein DEW08_18110 PF02954 Bacterial regulatory protein, Fis family DEW08_18110 PF00158 Sigma-54 interaction domain DEW08_18110 PF00072 Response regulator receiver domain DEW08_18115 PF00313 'Cold-shock' DNA-binding domain DEW08_18120 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DEW08_18120 PF01627 Hpt domain DEW08_18120 PF00072 Response regulator receiver domain DEW08_18120 PF00672 HAMP domain DEW08_18120 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) DEW08_18120 PF00512 His Kinase A (phospho-acceptor) domain DEW08_18130 PF00486 Transcriptional regulatory protein, C terminal DEW08_18130 PF00072 Response regulator receiver domain DEW08_18135 PF00005 ABC transporter DEW08_18140 PF00528 Binding-protein-dependent transport system inner membrane component DEW08_18145 PF00528 Binding-protein-dependent transport system inner membrane component DEW08_18150 PF12849 PBP superfamily domain DEW08_18155 PF16736 Single Cache-like DEW08_18155 PF00989 PAS fold DEW08_18155 PF00512 His Kinase A (phospho-acceptor) domain DEW08_18155 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DEW08_18160 PF00390 Malic enzyme, N-terminal domain DEW08_18160 PF03949 Malic enzyme, NAD binding domain DEW08_18160 PF01515 Phosphate acetyl/butaryl transferase DEW08_18165 PF02633 Creatinine amidohydrolase DEW08_18170 PF13335 Magnesium chelatase, subunit ChlI C-terminal DEW08_18170 PF01078 Magnesium chelatase, subunit ChlI DEW08_18195 PF03576 Peptidase family S58 DEW08_18200 PF13545 Crp-like helix-turn-helix domain DEW08_18200 PF00027 Cyclic nucleotide-binding domain DEW08_18205 PF03597 Cytochrome oxidase maturation protein cbb3-type DEW08_18220 PF13746 4Fe-4S dicluster domain DEW08_18220 PF11614 IG-like fold at C-terminal of FixG, putative oxidoreductase DEW08_18220 PF12801 4Fe-4S binding domain DEW08_18225 PF14715 N-terminal domain of cytochrome oxidase-cbb3, FixP DEW08_18225 PF13442 Cytochrome C oxidase, cbb3-type, subunit III DEW08_18225 PF00034 Cytochrome c DEW08_18250 PF17785 PUA-like domain DEW08_18250 PF10672 S-adenosylmethionine-dependent methyltransferase DEW08_18260 PF01661 Macro domain DEW08_18265 PF00719 Inorganic pyrophosphatase DEW08_18270 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle DEW08_18275 PF05958 tRNA (Uracil-5-)-methyltransferase DEW08_18290 PF00528 Binding-protein-dependent transport system inner membrane component DEW08_18315 PF00005 ABC transporter DEW08_18315 PF08402 TOBE domain DEW08_18320 PF13416 Bacterial extracellular solute-binding protein DEW08_18325 PF00990 Diguanylate cyclase, GGDEF domain DEW08_18325 PF17151 Periplasmic sensor domain DEW08_18345 PF01032 FecCD transport family DEW08_18350 PF04954 Siderophore-interacting protein DEW08_18350 PF08021 Siderophore-interacting FAD-binding domain DEW08_18355 PF00005 ABC transporter DEW08_18365 PF01037 Lrp/AsnC ligand binding domain DEW08_18385 PF03264 NapC/NirT cytochrome c family, N-terminal region DEW08_18390 PF13442 Cytochrome C oxidase, cbb3-type, subunit III DEW08_18395 PF05951 Bacterial protein of unknown function (DUF882) DEW08_18410 PF16338 Domain of unknown function (DUF4968) DEW08_18410 PF01055 Glycosyl hydrolases family 31 DEW08_18410 PF17137 Domain of unknown function (DUF5110) DEW08_18410 PF13802 Galactose mutarotase-like DEW08_18415 PF07690 Major Facilitator Superfamily DEW08_18420 PF00356 Bacterial regulatory proteins, lacI family DEW08_18425 PF02195 ParB-like nuclease domain DEW08_18425 PF17762 HTH domain found in ParB protein DEW08_18430 PF13614 AAA domain DEW08_18435 PF08448 PAS fold DEW08_18435 PF00990 Diguanylate cyclase, GGDEF domain DEW08_18440 PF00561 alpha/beta hydrolase fold DEW08_18450 PF07729 FCD domain DEW08_18450 PF00392 Bacterial regulatory proteins, gntR family DEW08_18455 PF04962 KduI/IolB family DEW08_18460 PF18158 Adaptive response protein AidB N-terminal domain DEW08_18460 PF02770 Acyl-CoA dehydrogenase, middle domain DEW08_18460 PF00441 Acyl-CoA dehydrogenase, C-terminal domain DEW08_18465 PF07690 Major Facilitator Superfamily DEW08_18480 PF10672 S-adenosylmethionine-dependent methyltransferase DEW08_18480 PF01170 Putative RNA methylase family UPF0020 DEW08_18480 PF02926 THUMP domain DEW08_18485 PF00067 Cytochrome P450 DEW08_18505 PF02629 CoA binding domain DEW08_18505 PF00549 CoA-ligase DEW08_18510 PF08442 ATP-grasp domain DEW08_18510 PF00549 CoA-ligase DEW08_18515 PF00106 short chain dehydrogenase DEW08_18525 PF16868 NMT1-like family DEW08_18550 PF02321 Outer membrane efflux protein DEW08_18560 PF00005 ABC transporter DEW08_18560 PF00664 ABC transporter transmembrane region DEW08_18565 PF00529 HlyD membrane-fusion protein of T1SS DEW08_18585 PF00535 Glycosyl transferase family 2 DEW08_18595 PF02515 CoA-transferase family III DEW08_18605 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component DEW08_18625 PF01810 LysE type translocator DEW08_18630 PF03746 LamB/YcsF family DEW08_18640 PF02682 Carboxyltransferase domain, subdomain C and D DEW08_18665 PF04055 Radical SAM superfamily DEW08_18665 PF02310 B12 binding domain DEW08_18670 PF16363 GDP-mannose 4,6 dehydratase DEW08_18675 PF16363 GDP-mannose 4,6 dehydratase DEW08_18690 PF00850 Histone deacetylase domain DEW08_18695 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family DEW08_18695 PF03466 LysR substrate binding domain DEW08_18700 PF01370 NAD dependent epimerase/dehydratase family DEW08_18725 PF00155 Aminotransferase class I and II DEW08_18735 PF00155 Aminotransferase class I and II DEW08_18740 PF01263 Aldose 1-epimerase DEW08_18750 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DEW08_18750 PF00512 His Kinase A (phospho-acceptor) domain DEW08_18750 PF00989 PAS fold DEW08_18750 PF16736 Single Cache-like DEW08_18755 PF00672 HAMP domain DEW08_18755 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain DEW08_18765 PF00034 Cytochrome c DEW08_18765 PF13442 Cytochrome C oxidase, cbb3-type, subunit III DEW08_18770 PF01593 Flavin containing amine oxidoreductase DEW08_18775 PF01734 Patatin-like phospholipase DEW08_18790 PF00455 DeoR C terminal sensor domain DEW08_18790 PF08220 DeoR-like helix-turn-helix domain DEW08_18795 PF16901 C-terminal domain of alpha-glycerophosphate oxidase DEW08_18795 PF01266 FAD dependent oxidoreductase DEW08_18800 PF00005 ABC transporter DEW08_18800 PF08402 TOBE domain DEW08_18805 PF17912 MalK OB fold domain DEW08_18805 PF00005 ABC transporter DEW08_18810 PF00528 Binding-protein-dependent transport system inner membrane component DEW08_18830 PF02782 FGGY family of carbohydrate kinases, C-terminal domain DEW08_18830 PF00370 FGGY family of carbohydrate kinases, N-terminal domain DEW08_18835 PF13533 Biotin-lipoyl like DEW08_18850 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DEW08_18850 PF00512 His Kinase A (phospho-acceptor) domain DEW08_18850 PF00989 PAS fold DEW08_18855 PF00072 Response regulator receiver domain DEW08_18855 PF00196 Bacterial regulatory proteins, luxR family DEW08_18860 PF00196 Bacterial regulatory proteins, luxR family DEW08_18860 PF00072 Response regulator receiver domain DEW08_18865 PF00325 Bacterial regulatory proteins, crp family DEW08_18865 PF00027 Cyclic nucleotide-binding domain DEW08_18870 PF00231 ATP synthase DEW08_18875 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain DEW08_18875 PF00306 ATP synthase alpha/beta chain, C terminal domain DEW08_18880 PF00430 ATP synthase B/B' CF(0) DEW08_18885 PF00137 ATP synthase subunit C DEW08_18890 PF00119 ATP synthase A chain DEW08_18910 PF02885 Glycosyl transferase family, helical bundle domain DEW08_18910 PF07831 Pyrimidine nucleoside phosphorylase C-terminal domain DEW08_18910 PF00591 Glycosyl transferase family, a/b domain DEW08_18915 PF10996 Beta-Casp domain DEW08_18915 PF07521 Zn-dependent metallo-hydrolase RNA specificity domain DEW08_18915 PF00753 Metallo-beta-lactamase superfamily DEW08_18935 PF05231 MASE1 DEW08_18935 PF07730 Histidine kinase DEW08_18935 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DEW08_18940 PF00196 Bacterial regulatory proteins, luxR family DEW08_18940 PF00072 Response regulator receiver domain DEW08_18955 PF03783 Curli production assembly/transport component CsgG DEW08_18975 PF01209 ubiE/COQ5 methyltransferase family DEW08_18985 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain DEW08_18985 PF01411 tRNA synthetases class II (A) DEW08_18985 PF02272 DHHA1 domain DEW08_18990 PF00132 Bacterial transferase hexapeptide (six repeats) DEW08_19010 PF01883 Iron-sulfur cluster assembly protein DEW08_19030 PF14824 Sirohaem biosynthesis protein central DEW08_19030 PF10414 Sirohaem synthase dimerisation region DEW08_19030 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases DEW08_19035 PF13442 Cytochrome C oxidase, cbb3-type, subunit III DEW08_19050 PF17805 AsnC-like ligand binding domain DEW08_19055 PF17805 AsnC-like ligand binding domain DEW08_19060 PF17805 AsnC-like ligand binding domain DEW08_19065 PF13186 Iron-sulfur cluster-binding domain DEW08_19065 PF04055 Radical SAM superfamily DEW08_19075 PF01379 Porphobilinogen deaminase, dipyromethane cofactor binding domain DEW08_19075 PF03900 Porphobilinogen deaminase, C-terminal domain DEW08_19090 PF00155 Aminotransferase class I and II DEW08_19090 PF00392 Bacterial regulatory proteins, gntR family DEW08_19095 PF11614 IG-like fold at C-terminal of FixG, putative oxidoreductase DEW08_19095 PF12801 4Fe-4S binding domain DEW08_19095 PF13746 4Fe-4S dicluster domain DEW08_19110 PF13458 Periplasmic binding protein DEW08_19115 PF01325 Iron dependent repressor, N-terminal DNA binding domain DEW08_19115 PF00480 ROK family DEW08_19125 PF02653 Branched-chain amino acid transport system / permease component DEW08_19130 PF13407 Periplasmic binding protein domain DEW08_19145 PF01261 Xylose isomerase-like TIM barrel DEW08_19150 PF00370 FGGY family of carbohydrate kinases, N-terminal domain DEW08_19150 PF02782 FGGY family of carbohydrate kinases, C-terminal domain DEW08_19160 PF04545 Sigma-70, region 4 DEW08_19160 PF04542 Sigma-70 region 2 DEW08_19160 PF00140 Sigma-70 factor, region 1.2 DEW08_19180 PF07378 Flagellar protein FlbT DEW08_19210 PF02874 ATP synthase alpha/beta family, beta-barrel domain DEW08_19210 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain DEW08_19210 PF18269 T3SS EscN ATPase C-terminal domain DEW08_19215 PF00460 Flagella basal body rod protein DEW08_19220 PF06429 Flagellar basal body rod FlgEFG protein C-terminal DEW08_19220 PF00460 Flagella basal body rod protein DEW08_19225 PF02049 Flagellar hook-basal body complex protein FliE DEW08_19230 PF01313 Bacterial export proteins, family 3 DEW08_19240 PF00771 FHIPEP family DEW08_19245 PF01311 Bacterial export proteins, family 1 DEW08_19250 PF01312 FlhB HrpN YscU SpaS Family DEW08_19285 PF02119 Flagellar P-ring protein DEW08_19300 PF06429 Flagellar basal body rod FlgEFG protein C-terminal DEW08_19300 PF07559 Flagellar basal body protein FlaE DEW08_19300 PF00460 Flagella basal body rod protein DEW08_19310 PF00691 OmpA family DEW08_19310 PF13677 Membrane MotB of proton-channel complex MotA/MotB DEW08_19335 PF00460 Flagella basal body rod protein DEW08_19335 PF06429 Flagellar basal body rod FlgEFG protein C-terminal DEW08_19340 PF06429 Flagellar basal body rod FlgEFG protein C-terminal DEW08_19340 PF00460 Flagella basal body rod protein DEW08_19345 PF13144 Chaperone for flagella basal body P-ring formation DEW08_19350 PF02107 Flagellar L-ring protein DEW08_19380 PF02154 Flagellar motor switch protein FliM DEW08_19380 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term DEW08_19390 PF01514 Secretory protein of YscJ/FliF family DEW08_19390 PF08345 Flagellar M-ring protein C-terminal DEW08_19400 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term DEW08_19405 PF00813 FliP family DEW08_19415 PF14842 FliG N-terminal domain DEW08_19415 PF01706 FliG C-terminal domain DEW08_19415 PF14841 FliG middle domain DEW08_19425 PF00486 Transcriptional regulatory protein, C terminal DEW08_19425 PF00072 Response regulator receiver domain DEW08_19430 PF13426 PAS domain DEW08_19430 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DEW08_19430 PF13188 PAS domain DEW08_19440 PF00512 His Kinase A (phospho-acceptor) domain DEW08_19440 PF01590 GAF domain DEW08_19440 PF00360 Phytochrome region DEW08_19440 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DEW08_19440 PF08446 PAS fold DEW08_19445 PF00072 Response regulator receiver domain DEW08_19450 PF00990 Diguanylate cyclase, GGDEF domain DEW08_19450 PF08448 PAS fold DEW08_19455 PF00512 His Kinase A (phospho-acceptor) domain DEW08_19455 PF08446 PAS fold DEW08_19455 PF00360 Phytochrome region DEW08_19455 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DEW08_19455 PF01590 GAF domain DEW08_19460 PF08446 PAS fold DEW08_19460 PF00360 Phytochrome region DEW08_19460 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DEW08_19460 PF01590 GAF domain DEW08_19465 PF00072 Response regulator receiver domain DEW08_19470 PF08361 MAATS-type transcriptional repressor, C-terminal region DEW08_19470 PF00440 Bacterial regulatory proteins, tetR family DEW08_19480 PF00440 Bacterial regulatory proteins, tetR family DEW08_19485 PF00529 HlyD membrane-fusion protein of T1SS DEW08_19485 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion DEW08_19490 PF00873 AcrB/AcrD/AcrF family DEW08_19495 PF02321 Outer membrane efflux protein DEW08_19505 PF00392 Bacterial regulatory proteins, gntR family DEW08_19505 PF07729 FCD domain DEW08_19515 PF04166 Pyridoxal phosphate biosynthetic protein PdxA DEW08_19520 PF00465 Iron-containing alcohol dehydrogenase DEW08_19525 PF00701 Dihydrodipicolinate synthetase family DEW08_19545 PF01557 Fumarylacetoacetate (FAA) hydrolase family DEW08_19565 PF07715 TonB-dependent Receptor Plug Domain DEW08_19565 PF00593 TonB dependent receptor DEW08_19570 PF00756 Putative esterase DEW08_19585 PF01270 Glycosyl hydrolases family 8 DEW08_19595 PF07238 PilZ domain DEW08_19595 PF00535 Glycosyl transferase family 2 DEW08_19595 PF03552 Cellulose synthase DEW08_19600 PF01053 Cys/Met metabolism PLP-dependent enzyme DEW08_19605 PF00291 Pyridoxal-phosphate dependent enzyme DEW08_19605 PF00571 CBS domain DEW08_19630 PF03707 Bacterial signalling protein N terminal repeat DEW08_19630 PF00990 Diguanylate cyclase, GGDEF domain DEW08_19630 PF00563 EAL domain DEW08_19635 PF13581 Histidine kinase-like ATPase domain DEW08_19655 PF02417 Chromate transporter DEW08_19660 PF02652 L-lactate permease DEW08_19675 PF00108 Thiolase, N-terminal domain DEW08_19675 PF02803 Thiolase, C-terminal domain DEW08_19680 PF00378 Enoyl-CoA hydratase/isomerase DEW08_19685 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family DEW08_19685 PF03466 LysR substrate binding domain DEW08_19690 PF07690 Major Facilitator Superfamily DEW08_19695 PF01037 Lrp/AsnC ligand binding domain DEW08_19700 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily DEW08_19705 PF13614 AAA domain DEW08_19710 PF17762 HTH domain found in ParB protein DEW08_19710 PF02195 ParB-like nuclease domain DEW08_19720 PF00501 AMP-binding enzyme DEW08_19720 PF00550 Phosphopantetheine attachment site DEW08_19720 PF00975 Thioesterase domain DEW08_19720 PF00668 Condensation domain DEW08_19720 PF13193 AMP-binding enzyme C-terminal domain DEW08_19725 PF00550 Phosphopantetheine attachment site DEW08_19725 PF00501 AMP-binding enzyme DEW08_19725 PF00668 Condensation domain DEW08_19725 PF13193 AMP-binding enzyme C-terminal domain DEW08_19730 PF00698 Acyl transferase domain DEW08_19730 PF00668 Condensation domain DEW08_19730 PF16197 Ketoacyl-synthetase C-terminal extension DEW08_19730 PF00109 Beta-ketoacyl synthase, N-terminal domain DEW08_19730 PF02801 Beta-ketoacyl synthase, C-terminal domain DEW08_19730 PF00550 Phosphopantetheine attachment site DEW08_19735 PF00501 AMP-binding enzyme DEW08_19735 PF00668 Condensation domain DEW08_19735 PF00550 Phosphopantetheine attachment site DEW08_19735 PF13193 AMP-binding enzyme C-terminal domain DEW08_19740 PF00668 Condensation domain DEW08_19740 PF00550 Phosphopantetheine attachment site DEW08_19740 PF00501 AMP-binding enzyme DEW08_19740 PF13193 AMP-binding enzyme C-terminal domain DEW08_19750 PF03621 MbtH-like protein DEW08_19760 PF00291 Pyridoxal-phosphate dependent enzyme DEW08_19770 PF00291 Pyridoxal-phosphate dependent enzyme DEW08_19775 PF13537 Glutamine amidotransferase domain DEW08_19775 PF00733 Asparagine synthase DEW08_19780 PF02224 Cytidylate kinase DEW08_19785 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain DEW08_19785 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain DEW08_19795 PF00441 Acyl-CoA dehydrogenase, C-terminal domain DEW08_19795 PF02770 Acyl-CoA dehydrogenase, middle domain DEW08_19795 PF02771 Acyl-CoA dehydrogenase, N-terminal domain DEW08_19805 PF04632 Fusaric acid resistance protein family DEW08_19815 PF00529 HlyD membrane-fusion protein of T1SS DEW08_19815 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion DEW08_19820 PF05175 Methyltransferase small domain DEW08_19820 PF07109 Magnesium-protoporphyrin IX methyltransferase C-terminus DEW08_19825 PF00672 HAMP domain DEW08_19825 PF12729 Four helix bundle sensory module for signal transduction DEW08_19825 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain DEW08_19830 PF00563 EAL domain DEW08_19830 PF03707 Bacterial signalling protein N terminal repeat DEW08_19830 PF00990 Diguanylate cyclase, GGDEF domain DEW08_19830 PF13188 PAS domain DEW08_19835 PF00072 Response regulator receiver domain DEW08_19855 PF00005 ABC transporter DEW08_19865 PF00245 Alkaline phosphatase DEW08_19875 PF00245 Alkaline phosphatase DEW08_19920 PF04055 Radical SAM superfamily DEW08_19920 PF02310 B12 binding domain DEW08_19945 PF02690 Na+/Pi-cotransporter DEW08_19950 PF00082 Subtilase family DEW08_19950 PF03797 Autotransporter beta-domain DEW08_19950 PF12951 Passenger-associated-transport-repeat DEW08_19955 PF01112 Asparaginase DEW08_19965 PF03576 Peptidase family S58 DEW08_19970 PF00528 Binding-protein-dependent transport system inner membrane component DEW08_19970 PF12911 N-terminal TM domain of oligopeptide transport permease C DEW08_19975 PF00528 Binding-protein-dependent transport system inner membrane component DEW08_19980 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle DEW08_19985 PF08352 Oligopeptide/dipeptide transporter, C-terminal region DEW08_19985 PF00005 ABC transporter DEW08_19990 PF01063 Amino-transferase class IV DEW08_19995 PF01418 Helix-turn-helix domain, rpiR family DEW08_19995 PF01380 SIS domain DEW08_20000 PF05544 Proline racemase DEW08_20005 PF05544 Proline racemase DEW08_20010 PF00392 Bacterial regulatory proteins, gntR family DEW08_20010 PF07729 FCD domain DEW08_20020 PF00701 Dihydrodipicolinate synthetase family DEW08_20025 PF01266 FAD dependent oxidoreductase DEW08_20030 PF13458 Periplasmic binding protein DEW08_20055 PF00916 Sulfate permease family DEW08_20055 PF01740 STAS domain DEW08_20060 PF00756 Putative esterase DEW08_20065 PF08240 Alcohol dehydrogenase GroES-like domain DEW08_20065 PF00107 Zinc-binding dehydrogenase DEW08_20070 PF03466 LysR substrate binding domain DEW08_20070 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family DEW08_20075 PF00392 Bacterial regulatory proteins, gntR family DEW08_20075 PF07729 FCD domain DEW08_20090 PF02632 BioY family DEW08_20095 PF02361 Cobalt transport protein DEW08_20100 PF00005 ABC transporter DEW08_20135 PF01039 Carboxyl transferase domain DEW08_20140 PF06857 Malonate decarboxylase delta subunit (MdcD) DEW08_20145 PF16957 Malonate decarboxylase, alpha subunit, transporter DEW08_20150 PF08279 HTH domain DEW08_20150 PF03099 Biotin/lipoate A/B protein ligase family DEW08_20150 PF02237 Biotin protein ligase C terminal domain DEW08_20155 PF03977 Na+-transporting oxaloacetate decarboxylase beta subunit DEW08_20160 PF01874 ATP:dephospho-CoA triphosphoribosyl transferase DEW08_20175 PF00107 Zinc-binding dehydrogenase DEW08_20175 PF08240 Alcohol dehydrogenase GroES-like domain DEW08_20180 PF03480 Bacterial extracellular solute-binding protein, family 7 DEW08_20190 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component DEW08_20195 PF04295 D-galactarate dehydratase / Altronate hydrolase, C terminus DEW08_20195 PF08666 SAF domain DEW08_20200 PF01232 Mannitol dehydrogenase Rossmann domain DEW08_20200 PF08125 Mannitol dehydrogenase C-terminal domain DEW08_20215 PF00005 ABC transporter DEW08_20215 PF00664 ABC transporter transmembrane region DEW08_20220 PF01032 FecCD transport family DEW08_20230 PF00005 ABC transporter DEW08_20235 PF00593 TonB dependent receptor DEW08_20235 PF07715 TonB-dependent Receptor Plug Domain DEW08_20245 PF04954 Siderophore-interacting protein DEW08_20245 PF08021 Siderophore-interacting FAD-binding domain DEW08_20255 PF00230 Major intrinsic protein DEW08_20265 PF00440 Bacterial regulatory proteins, tetR family DEW08_20270 PF00144 Beta-lactamase DEW08_20285 PF00440 Bacterial regulatory proteins, tetR family DEW08_20295 PF00072 Response regulator receiver domain DEW08_20295 PF00672 HAMP domain DEW08_20295 PF00512 His Kinase A (phospho-acceptor) domain DEW08_20295 PF17149 Periplasmic sensor domain found in signal transduction proteins DEW08_20295 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DEW08_20295 PF01627 Hpt domain DEW08_20300 PF06796 Periplasmic nitrate reductase protein NapE DEW08_20310 PF04879 Molybdopterin oxidoreductase Fe4S4 domain DEW08_20310 PF01568 Molydopterin dinucleotide binding domain DEW08_20310 PF00384 Molybdopterin oxidoreductase DEW08_20315 PF03892 Nitrate reductase cytochrome c-type subunit (NapB) DEW08_20320 PF03264 NapC/NirT cytochrome c family, N-terminal region DEW08_20325 PF00005 ABC transporter DEW08_20340 PF02653 Branched-chain amino acid transport system / permease component DEW08_20355 PF00072 Response regulator receiver domain DEW08_20355 PF00486 Transcriptional regulatory protein, C terminal DEW08_20360 PF01339 CheB methylesterase DEW08_20360 PF00072 Response regulator receiver domain DEW08_20380 PF00392 Bacterial regulatory proteins, gntR family DEW08_20380 PF07729 FCD domain DEW08_20385 PF07690 Major Facilitator Superfamily DEW08_20390 PF09339 IclR helix-turn-helix domain DEW08_20390 PF01614 Bacterial transcriptional regulator DEW08_20400 PF03466 LysR substrate binding domain DEW08_20400 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family DEW08_20405 PF00576 HIUase/Transthyretin family DEW08_20415 PF09349 OHCU decarboxylase DEW08_20415 PF01014 Uricase DEW08_20455 PF00392 Bacterial regulatory proteins, gntR family DEW08_20455 PF07729 FCD domain DEW08_20460 PF00672 HAMP domain DEW08_20460 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DEW08_20460 PF00512 His Kinase A (phospho-acceptor) domain DEW08_20460 PF01627 Hpt domain DEW08_20460 PF00072 Response regulator receiver domain DEW08_20460 PF17149 Periplasmic sensor domain found in signal transduction proteins DEW08_20475 PF00990 Diguanylate cyclase, GGDEF domain DEW08_20475 PF00563 EAL domain DEW08_20475 PF08448 PAS fold DEW08_20495 PF16527 Two-component sensor protein CpxA, periplasmic domain DEW08_20495 PF00512 His Kinase A (phospho-acceptor) domain DEW08_20495 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DEW08_20495 PF00672 HAMP domain DEW08_20500 PF00072 Response regulator receiver domain DEW08_20500 PF00486 Transcriptional regulatory protein, C terminal DEW08_20505 PF00005 ABC transporter DEW08_20505 PF17912 MalK OB fold domain DEW08_20510 PF00528 Binding-protein-dependent transport system inner membrane component DEW08_20520 PF01547 Bacterial extracellular solute-binding protein DEW08_20525 PF01182 Glucosamine-6-phosphate isomerases/6-phosphogluconolactonase DEW08_20530 PF02781 Glucose-6-phosphate dehydrogenase, C-terminal domain DEW08_20530 PF00479 Glucose-6-phosphate dehydrogenase, NAD binding domain DEW08_20535 PF00365 Phosphofructokinase DEW08_20545 PF00367 phosphotransferase system, EIIB DEW08_20545 PF02378 Phosphotransferase system, EIIC DEW08_20550 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 DEW08_20550 PF00381 PTS HPr component phosphorylation site DEW08_20550 PF02896 PEP-utilising enzyme, TIM barrel domain DEW08_20550 PF00391 PEP-utilising enzyme, mobile domain DEW08_20550 PF05524 PEP-utilising enzyme, N-terminal DEW08_20555 PF00072 Response regulator receiver domain DEW08_20555 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DEW08_20555 PF00512 His Kinase A (phospho-acceptor) domain DEW08_20555 PF09456 RcsC Alpha-Beta-Loop (ABL) DEW08_20565 PF00199 Catalase DEW08_20565 PF06628 Catalase-related immune-responsive DEW08_20570 PF03466 LysR substrate binding domain DEW08_20570 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family DEW08_20575 PF00248 Aldo/keto reductase family DEW08_20620 PF01728 FtsJ-like methyltransferase DEW08_20645 PF00534 Glycosyl transferases group 1 DEW08_20645 PF00862 Sucrose synthase DEW08_20650 PF00483 Nucleotidyl transferase DEW08_20650 PF01050 Mannose-6-phosphate isomerase DEW08_20655 PF13439 Glycosyltransferase Family 4 DEW08_20655 PF00534 Glycosyl transferases group 1 DEW08_20665 PF16363 GDP-mannose 4,6 dehydratase DEW08_20670 PF00535 Glycosyl transferase family 2 DEW08_20675 PF03808 Glycosyl transferase WecB/TagA/CpsF family DEW08_20680 PF13439 Glycosyltransferase Family 4 DEW08_20680 PF00534 Glycosyl transferases group 1 DEW08_20700 PF08484 C-methyltransferase C-terminal domain DEW08_20700 PF08421 Putative zinc binding domain DEW08_20705 PF01370 NAD dependent epimerase/dehydratase family DEW08_20710 PF02397 Bacterial sugar transferase DEW08_20715 PF00483 Nucleotidyl transferase DEW08_20735 PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase DEW08_20740 PF00111 2Fe-2S iron-sulfur cluster binding domain DEW08_20740 PF01799 [2Fe-2S] binding domain DEW08_20750 PF12729 Four helix bundle sensory module for signal transduction DEW08_20750 PF00672 HAMP domain DEW08_20750 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain DEW08_20760 PF06114 IrrE N-terminal-like domain DEW08_20770 PF00313 'Cold-shock' DNA-binding domain DEW08_20780 PF03795 YCII-related domain DEW08_20790 PF00072 Response regulator receiver domain DEW08_20790 PF00196 Bacterial regulatory proteins, luxR family DEW08_20795 PF17754 MftR C-terminal domain DEW08_20795 PF00440 Bacterial regulatory proteins, tetR family DEW08_20805 PF07687 Peptidase dimerisation domain DEW08_20805 PF01546 Peptidase family M20/M25/M40 DEW08_20815 PF03466 LysR substrate binding domain DEW08_20815 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family DEW08_20820 PF00072 Response regulator receiver domain DEW08_20825 PF00072 Response regulator receiver domain DEW08_20825 PF00672 HAMP domain DEW08_20825 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DEW08_20825 PF00512 His Kinase A (phospho-acceptor) domain DEW08_20825 PF01627 Hpt domain DEW08_20825 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) DEW08_20845 PF03783 Curli production assembly/transport component CsgG DEW08_20860 PF04542 Sigma-70 region 2 DEW08_20860 PF08281 Sigma-70, region 4 DEW08_20865 PF00593 TonB dependent receptor DEW08_20865 PF07715 TonB-dependent Receptor Plug Domain DEW08_20875 PF00664 ABC transporter transmembrane region DEW08_20875 PF00005 ABC transporter DEW08_20910 PF03358 NADPH-dependent FMN reductase DEW08_20915 PF03466 LysR substrate binding domain DEW08_20915 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family DEW08_20920 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DEW08_20920 PF00512 His Kinase A (phospho-acceptor) domain DEW08_20925 PF01156 Inosine-uridine preferring nucleoside hydrolase DEW08_20940 PF00239 Resolvase, N terminal domain DEW08_20940 PF02796 Helix-turn-helix domain of resolvase DEW08_20945 PF13700 Domain of unknown function (DUF4158) DEW08_20945 PF01526 Tn3 transposase DDE domain DEW08_20980 PF00072 Response regulator receiver domain DEW08_20980 PF00196 Bacterial regulatory proteins, luxR family DEW08_20985 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DEW08_20985 PF00512 His Kinase A (phospho-acceptor) domain DEW08_20985 PF00989 PAS fold DEW08_21000 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 DEW08_21005 PF00361 Proton-conducting membrane transporter DEW08_21005 PF04039 Domain related to MnhB subunit of Na+/H+ antiporter DEW08_21005 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus DEW08_21005 PF13244 Domain of unknown function (DUF4040) DEW08_21010 PF00420 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L DEW08_21015 PF00361 Proton-conducting membrane transporter DEW08_21020 PF01899 Na+/H+ ion antiporter subunit DEW08_21025 PF04066 Multiple resistance and pH regulation protein F (MrpF / PhaF) DEW08_21030 PF03334 Na+/H+ antiporter subunit DEW08_21040 PF07015 VirC1 protein DEW08_21050 PF00717 Peptidase S24-like DEW08_21055 PF11799 impB/mucB/samB family C-terminal domain DEW08_21055 PF00817 impB/mucB/samB family DEW08_21055 PF13438 Domain of unknown function (DUF4113) DEW08_21060 PF08401 Domain of unknown function (DUF1738) DEW08_21060 PF18818 Metallopeptidase superfamily domain DEW08_21060 PF13362 Toprim domain DEW08_21075 PF10502 Signal peptidase, peptidase S26 DEW08_21080 PF02534 Type IV secretory system Conjugative DNA transfer DEW08_21085 PF18821 Large polyvalent protein-associated domain 7 DEW08_21085 PF03432 Relaxase/Mobilisation nuclease domain DEW08_21090 PF00872 Transposase, Mutator family DEW08_21135 PF00872 Transposase, Mutator family DEW08_21140 PF00437 Type II/IV secretion system protein DEW08_21145 PF04956 TrbC/VIRB2 family DEW08_21155 PF03135 CagE, TrbE, VirB family, component of type IV transporter system DEW08_21170 PF04610 TrbL/VirB6 plasmid conjugal transfer protein DEW08_21175 PF04335 VirB8 protein DEW08_21180 PF03524 Conjugal transfer protein DEW08_21190 PF03743 Bacterial conjugation TrbI-like protein DEW08_21215 PF00239 Resolvase, N terminal domain DEW08_21215 PF02796 Helix-turn-helix domain of resolvase DEW08_21220 PF00872 Transposase, Mutator family DEW08_21225 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain DEW08_21225 PF00672 HAMP domain DEW08_21250 PF00072 Response regulator receiver domain DEW08_21250 PF00196 Bacterial regulatory proteins, luxR family DEW08_21260 PF00072 Response regulator receiver domain DEW08_21260 PF01627 Hpt domain DEW08_21260 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DEW08_21260 PF00512 His Kinase A (phospho-acceptor) domain DEW08_21260 PF00672 HAMP domain DEW08_21260 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) DEW08_21265 PF01527 Transposase DEW08_21270 PF13683 Integrase core domain DEW08_21270 PF13276 HTH-like domain DEW08_21280 PF04397 LytTr DNA-binding domain DEW08_21280 PF00072 Response regulator receiver domain DEW08_21285 PF03180 NLPA lipoprotein DEW08_21290 PF00528 Binding-protein-dependent transport system inner membrane component DEW08_21300 PF03180 NLPA lipoprotein DEW08_21320 PF01634 ATP phosphoribosyltransferase DEW08_21325 PF00815 Histidinol dehydrogenase DEW08_21330 PF06793 Uncharacterised protein family (UPF0262) DEW08_21335 PF01451 Low molecular weight phosphotyrosine protein phosphatase DEW08_21340 PF01627 Hpt domain DEW08_21340 PF17149 Periplasmic sensor domain found in signal transduction proteins DEW08_21340 PF00672 HAMP domain DEW08_21340 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DEW08_21340 PF00512 His Kinase A (phospho-acceptor) domain DEW08_21340 PF00072 Response regulator receiver domain DEW08_21350 PF01176 Translation initiation factor 1A / IF-1 DEW08_21355 PF02545 Maf-like protein DEW08_21360 PF10150 Ribonuclease E/G family DEW08_21365 PF03884 DNA gyrase inhibitor YacG DEW08_21395 PF00528 Binding-protein-dependent transport system inner membrane component DEW08_21400 PF00528 Binding-protein-dependent transport system inner membrane component DEW08_21410 PF00005 ABC transporter DEW08_21410 PF17912 MalK OB fold domain DEW08_21415 PF00356 Bacterial regulatory proteins, lacI family DEW08_21425 PF16884 N-terminal domain of oxidoreductase DEW08_21425 PF00107 Zinc-binding dehydrogenase DEW08_21430 PF00465 Iron-containing alcohol dehydrogenase DEW08_21435 PF16925 Tetracyclin repressor-like, C-terminal domain DEW08_21435 PF00440 Bacterial regulatory proteins, tetR family DEW08_21450 PF01022 Bacterial regulatory protein, arsR family DEW08_21460 PF00873 AcrB/AcrD/AcrF family DEW08_21465 PF00581 Rhodanese-like domain DEW08_21485 PF00034 Cytochrome c DEW08_21495 PF00994 Probable molybdopterin binding domain DEW08_21505 PF12801 4Fe-4S binding domain DEW08_21505 PF04205 FMN-binding domain DEW08_21510 PF18793 Nitrous oxide reductase propeller repeat 2 DEW08_21510 PF18764 Nitrous oxide reductase propeller repeat DEW08_21510 PF13473 Cupredoxin-like domain DEW08_21520 PF00005 ABC transporter DEW08_21525 PF12679 ABC-2 family transporter protein DEW08_21530 PF05573 NosL DEW08_21540 PF02416 mttA/Hcf106 family DEW08_21560 PF00005 ABC transporter DEW08_21560 PF12704 MacB-like periplasmic core domain DEW08_21560 PF02687 FtsX-like permease family DEW08_21565 PF02687 FtsX-like permease family DEW08_21565 PF00005 ABC transporter DEW08_21565 PF12704 MacB-like periplasmic core domain DEW08_21575 PF00072 Response regulator receiver domain DEW08_21575 PF13426 PAS domain DEW08_21575 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DEW08_21580 PF02254 TrkA-N domain DEW08_21580 PF02080 TrkA-C domain DEW08_21585 PF02386 Cation transport protein DEW08_21590 PF00034 Cytochrome c DEW08_21590 PF03150 Di-haem cytochrome c peroxidase DEW08_21620 PF06429 Flagellar basal body rod FlgEFG protein C-terminal DEW08_21620 PF00460 Flagella basal body rod protein DEW08_21620 PF07559 Flagellar basal body protein FlaE DEW08_21620 PF00460 Flagella basal body rod protein DEW08_21620 PF06429 Flagellar basal body rod FlgEFG protein C-terminal DEW08_21620 PF07559 Flagellar basal body protein FlaE DEW08_21635 PF03480 Bacterial extracellular solute-binding protein, family 7 DEW08_21660 PF01609 Transposase DDE domain DEW08_21660 PF13808 DDE_Tnp_1-associated DEW08_21675 PF13409 Glutathione S-transferase, N-terminal domain DEW08_21680 PF03466 LysR substrate binding domain DEW08_21680 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family DEW08_21690 PF00892 EamA-like transporter family DEW08_21695 PF00999 Sodium/hydrogen exchanger family DEW08_21705 PF01075 Glycosyltransferase family 9 (heptosyltransferase) DEW08_21710 PF03739 Lipopolysaccharide export system permease LptF/LptG DEW08_21735 PF16363 GDP-mannose 4,6 dehydratase DEW08_21755 PF02322 Cytochrome bd terminal oxidase subunit II DEW08_21760 PF01654 Cytochrome bd terminal oxidase subunit I DEW08_21765 PF01914 MarC family integral membrane protein DEW08_21790 PF02632 BioY family DEW08_21795 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain DEW08_21795 PF00364 Biotin-requiring enzyme DEW08_21795 PF00289 Biotin carboxylase, N-terminal domain DEW08_21795 PF02785 Biotin carboxylase C-terminal domain DEW08_21800 PF01039 Carboxyl transferase domain DEW08_21805 PF01381 Helix-turn-helix DEW08_21805 PF09856 Predicted transcriptional regulator (DUF2083) DEW08_21805 PF06114 IrrE N-terminal-like domain DEW08_21810 PF00440 Bacterial regulatory proteins, tetR family DEW08_21810 PF16859 Tetracyclin repressor-like, C-terminal domain DEW08_21815 PF13533 Biotin-lipoyl like DEW08_21820 PF07690 Major Facilitator Superfamily DEW08_21830 PF04317 YcjX-like family, DUF463 DEW08_21835 PF05128 Domain of unknown function (DUF697) DEW08_21840 PF00011 Hsp20/alpha crystallin family DEW08_21855 PF00873 AcrB/AcrD/AcrF family DEW08_21860 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion DEW08_21870 PF01207 Dihydrouridine synthase (Dus) DEW08_21875 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family DEW08_21875 PF03466 LysR substrate binding domain DEW08_21880 PF01266 FAD dependent oxidoreductase DEW08_21890 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain DEW08_21890 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain DEW08_21895 PF01228 Glycine radical DEW08_21895 PF02901 Pyruvate formate lyase-like DEW08_21900 PF04055 Radical SAM superfamily DEW08_21905 PF00690 Cation transporter/ATPase, N-terminus DEW08_21905 PF00689 Cation transporting ATPase, C-terminus DEW08_21910 PF07943 Penicillin-binding protein 5, C-terminal domain DEW08_21910 PF00768 D-alanyl-D-alanine carboxypeptidase DEW08_21920 PF04321 RmlD substrate binding domain DEW08_21945 PF00664 ABC transporter transmembrane region DEW08_21945 PF00005 ABC transporter DEW08_21955 PF03275 UDP-galactopyranose mutase DEW08_21965 PF01926 50S ribosome-binding GTPase DEW08_21965 PF16360 GTP-binding GTPase Middle Region DEW08_21965 PF13167 GTP-binding GTPase N-terminal DEW08_21970 PF13407 Periplasmic binding protein domain DEW08_21975 PF00005 ABC transporter DEW08_21980 PF02653 Branched-chain amino acid transport system / permease component DEW08_21985 PF01408 Oxidoreductase family, NAD-binding Rossmann fold DEW08_21990 PF00920 Dehydratase family DEW08_22000 PF00701 Dihydrodipicolinate synthetase family DEW08_22005 PF00171 Aldehyde dehydrogenase family DEW08_22015 PF03466 LysR substrate binding domain DEW08_22015 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family DEW08_22020 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component DEW08_22030 PF03480 Bacterial extracellular solute-binding protein, family 7 DEW08_22050 PF04290 Tripartite ATP-independent periplasmic transporters, DctQ component DEW08_22055 PF03480 Bacterial extracellular solute-binding protein, family 7 DEW08_22065 PF00392 Bacterial regulatory proteins, gntR family DEW08_22065 PF07729 FCD domain DEW08_22080 PF05343 M42 glutamyl aminopeptidase DEW08_22090 PF13537 Glutamine amidotransferase domain DEW08_22090 PF00733 Asparagine synthase DEW08_22100 PF07690 Major Facilitator Superfamily DEW08_22105 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family DEW08_22105 PF03466 LysR substrate binding domain DEW08_22125 PF12833 Helix-turn-helix domain DEW08_22150 PF00664 ABC transporter transmembrane region DEW08_22150 PF00005 ABC transporter DEW08_22150 PF03412 Peptidase C39 family DEW08_22160 PF00005 ABC transporter DEW08_22160 PF00664 ABC transporter transmembrane region DEW08_22160 PF03412 Peptidase C39 family DEW08_22180 PF00210 Ferritin-like domain DEW08_22185 PF00210 Ferritin-like domain DEW08_22195 PF00497 Bacterial extracellular solute-binding proteins, family 3 DEW08_22200 PF00512 His Kinase A (phospho-acceptor) domain DEW08_22200 PF00672 HAMP domain DEW08_22200 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) DEW08_22200 PF00072 Response regulator receiver domain DEW08_22200 PF01627 Hpt domain DEW08_22200 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DEW08_22205 PF00989 PAS fold DEW08_22205 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DEW08_22205 PF00512 His Kinase A (phospho-acceptor) domain DEW08_22210 PF02515 CoA-transferase family III DEW08_22215 PF00285 Citrate synthase, C-terminal domain DEW08_22220 PF07995 Glucose / Sorbosone dehydrogenase DEW08_22250 PF01266 FAD dependent oxidoreductase DEW08_22255 PF03466 LysR substrate binding domain DEW08_22255 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family DEW08_22260 PF00120 Glutamine synthetase, catalytic domain DEW08_22265 PF01266 FAD dependent oxidoreductase DEW08_22290 PF06429 Flagellar basal body rod FlgEFG protein C-terminal DEW08_22290 PF00460 Flagella basal body rod protein DEW08_22290 PF07559 Flagellar basal body protein FlaE DEW08_22305 PF07690 Major Facilitator Superfamily DEW08_22325 PF00403 Heavy-metal-associated domain DEW08_22345 PF03458 UPF0126 domain DEW08_22360 PF00633 Helix-hairpin-helix motif DEW08_22360 PF10576 Iron-sulfur binding domain of endonuclease III DEW08_22360 PF00730 HhH-GPD superfamily base excision DNA repair protein DEW08_22370 PF01979 Amidohydrolase family DEW08_22370 PF13382 Adenine deaminase C-terminal domain DEW08_22380 PF00672 HAMP domain DEW08_22380 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain DEW08_22400 PF03886 ABC-type transport auxiliary lipoprotein component DEW08_22400 PF02470 MlaD protein DEW08_22405 PF00005 ABC transporter DEW08_22410 PF02405 Permease MlaE DEW08_22415 PF00156 Phosphoribosyl transferase domain DEW08_22420 PF08530 X-Pro dipeptidyl-peptidase C-terminal non-catalytic domain DEW08_22420 PF02129 X-Pro dipeptidyl-peptidase (S15 family) DEW08_22430 PF01814 Hemerythrin HHE cation binding domain DEW08_22460 PF00430 ATP synthase B/B' CF(0) DEW08_22460 PF11154 Protein of unknown function (DUF2934) DEW08_22465 PF00892 EamA-like transporter family DEW08_22470 PF08274 PhnA Zinc-Ribbon DEW08_22470 PF03831 PhnA domain DEW08_22490 PF00005 ABC transporter DEW08_22525 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DEW08_22525 PF00512 His Kinase A (phospho-acceptor) domain DEW08_22525 PF01627 Hpt domain DEW08_22525 PF00072 Response regulator receiver domain DEW08_22525 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) DEW08_22525 PF00672 HAMP domain DEW08_22530 PF00128 Alpha amylase, catalytic domain DEW08_22530 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) DEW08_22555 PF00271 Helicase conserved C-terminal domain DEW08_22555 PF00270 DEAD/DEAH box helicase DEW08_22565 PF13807 G-rich domain on putative tyrosine kinase DEW08_22565 PF13614 AAA domain DEW08_22565 PF02706 Chain length determinant protein DEW08_22570 PF00553 Cellulose binding domain DEW08_22570 PF00331 Glycosyl hydrolase family 10 DEW08_22580 PF00150 Cellulase (glycosyl hydrolase family 5) DEW08_22585 PF00132 Bacterial transferase hexapeptide (six repeats) DEW08_22605 PF00535 Glycosyl transferase family 2 DEW08_22610 PF00534 Glycosyl transferases group 1 DEW08_22610 PF13439 Glycosyltransferase Family 4 DEW08_22615 PF13439 Glycosyltransferase Family 4 DEW08_22615 PF00534 Glycosyl transferases group 1 DEW08_22625 PF00550 Phosphopantetheine attachment site DEW08_22630 PF00501 AMP-binding enzyme DEW08_22630 PF13193 AMP-binding enzyme C-terminal domain DEW08_22635 PF13537 Glutamine amidotransferase domain DEW08_22635 PF00733 Asparagine synthase DEW08_22640 PF02540 NAD synthase DEW08_22665 PF00072 Response regulator receiver domain DEW08_22665 PF00486 Transcriptional regulatory protein, C terminal DEW08_22670 PF02254 TrkA-N domain DEW08_22670 PF00999 Sodium/hydrogen exchanger family DEW08_22675 PF12857 TOBE-like domain DEW08_22675 PF00005 ABC transporter DEW08_22680 PF00528 Binding-protein-dependent transport system inner membrane component DEW08_22700 PF02082 Transcriptional regulator DEW08_22705 PF00753 Metallo-beta-lactamase superfamily DEW08_22710 PF02195 ParB-like nuclease domain DEW08_22710 PF17762 HTH domain found in ParB protein DEW08_22715 PF13614 AAA domain DEW08_22725 PF00005 ABC transporter DEW08_22725 PF08402 TOBE domain DEW08_22730 PF13416 Bacterial extracellular solute-binding protein DEW08_22735 PF00528 Binding-protein-dependent transport system inner membrane component DEW08_22740 PF00528 Binding-protein-dependent transport system inner membrane component DEW08_22750 PF01381 Helix-turn-helix DEW08_22750 PF07883 Cupin domain DEW08_22755 PF00171 Aldehyde dehydrogenase family DEW08_22760 PF00202 Aminotransferase class-III DEW08_22790 PF02080 TrkA-C domain DEW08_22790 PF03600 Citrate transporter DEW08_22805 PF00155 Aminotransferase class I and II DEW08_22810 PF00512 His Kinase A (phospho-acceptor) domain DEW08_22810 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DEW08_22810 PF00989 PAS fold DEW08_22820 PF00376 MerR family regulatory protein DEW08_22820 PF09278 MerR, DNA binding DEW08_22830 PF00378 Enoyl-CoA hydratase/isomerase DEW08_22830 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain DEW08_22830 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain DEW08_22840 PF00196 Bacterial regulatory proteins, luxR family DEW08_22840 PF00072 Response regulator receiver domain DEW08_22850 PF03922 OmpW family DEW08_22860 PF01266 FAD dependent oxidoreductase DEW08_22880 PF01322 Cytochrome C' DEW08_22895 PF00043 Glutathione S-transferase, C-terminal domain DEW08_22895 PF13417 Glutathione S-transferase, N-terminal domain DEW08_22900 PF00753 Metallo-beta-lactamase superfamily DEW08_22900 PF16123 Hydroxyacylglutathione hydrolase C-terminus DEW08_22910 PF00672 HAMP domain DEW08_22910 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain DEW08_22925 PF00561 alpha/beta hydrolase fold DEW08_22925 PF07021 Methionine biosynthesis protein MetW DEW08_22930 PF00561 alpha/beta hydrolase fold DEW08_22935 PF01817 Chorismate mutase type II DEW08_22935 PF00800 Prephenate dehydratase DEW08_22935 PF01842 ACT domain DEW08_22940 PF00155 Aminotransferase class I and II DEW08_22955 PF10609 NUBPL iron-transfer P-loop NTPase DEW08_22965 PF00771 FHIPEP family DEW08_22970 PF00158 Sigma-54 interaction domain DEW08_22970 PF02954 Bacterial regulatory protein, Fis family DEW08_22975 PF01618 MotA/TolQ/ExbB proton channel family DEW08_22980 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term DEW08_22995 PF01381 Helix-turn-helix DEW08_23010 PF00072 Response regulator receiver domain DEW08_23025 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DEW08_23025 PF00512 His Kinase A (phospho-acceptor) domain DEW08_23035 PF00571 CBS domain DEW08_23035 PF03471 Transporter associated domain DEW08_23035 PF01595 Cyclin M transmembrane N-terminal domain DEW08_23045 PF13193 AMP-binding enzyme C-terminal domain DEW08_23045 PF00501 AMP-binding enzyme DEW08_23050 PF01925 Sulfite exporter TauE/SafE DEW08_23055 PF00005 ABC transporter DEW08_23070 PF02653 Branched-chain amino acid transport system / permease component DEW08_23085 PF01098 Cell cycle protein DEW08_23095 PF01555 DNA methylase DEW08_23095 PF18755 Restriction Enzyme Adenine Methylase Associated DEW08_23100 PF01351 Ribonuclease HII DEW08_23105 PF00027 Cyclic nucleotide-binding domain DEW08_23105 PF13545 Crp-like helix-turn-helix domain DEW08_23110 PF02810 SEC-C motif DEW08_23115 PF00313 'Cold-shock' DNA-binding domain DEW08_23120 PF00873 AcrB/AcrD/AcrF family DEW08_23125 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion DEW08_23125 PF00529 HlyD membrane-fusion protein of T1SS DEW08_23140 PF17200 Single Cache domain 2 DEW08_23140 PF00672 HAMP domain DEW08_23140 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain DEW08_23160 PF00994 Probable molybdopterin binding domain DEW08_23165 PF01464 Transglycosylase SLT domain DEW08_23165 PF14718 Soluble lytic murein transglycosylase L domain DEW08_23170 PF03167 Uracil DNA glycosylase superfamily DEW08_23185 PF03975 CheD chemotactic sensory transduction DEW08_23190 PF02113 D-Ala-D-Ala carboxypeptidase 3 (S13) family DEW08_23205 PF01259 SAICAR synthetase DEW08_23210 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain DEW08_23210 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain DEW08_23210 PF01842 ACT domain DEW08_23215 PF01569 PAP2 superfamily DEW08_23235 PF00171 Aldehyde dehydrogenase family DEW08_23240 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component DEW08_23250 PF03480 Bacterial extracellular solute-binding protein, family 7 DEW08_23285 PF03572 Peptidase family S41 DEW08_23285 PF13180 PDZ domain DEW08_23290 PF02397 Bacterial sugar transferase DEW08_23295 PF03741 Integral membrane protein TerC family DEW08_23315 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain DEW08_23315 PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain DEW08_23325 PF14698 Argininosuccinate lyase C-terminal DEW08_23325 PF00206 Lyase DEW08_23330 PF08534 Redoxin DEW08_23335 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain DEW08_23335 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain DEW08_23340 PF00766 Electron transfer flavoprotein FAD-binding domain DEW08_23340 PF01012 Electron transfer flavoprotein domain DEW08_23345 PF01012 Electron transfer flavoprotein domain DEW08_23350 PF01923 Cobalamin adenosyltransferase DEW08_23360 PF00232 Glycosyl hydrolase family 1 DEW08_23365 PF02525 Flavodoxin-like fold DEW08_23385 PF02463 RecF/RecN/SMC N terminal domain DEW08_23390 PF13462 Thioredoxin DEW08_23400 PF00633 Helix-hairpin-helix motif DEW08_23400 PF00730 HhH-GPD superfamily base excision DNA repair protein DEW08_23400 PF14815 NUDIX domain DEW08_23410 PF02743 Cache domain DEW08_23410 PF00512 His Kinase A (phospho-acceptor) domain DEW08_23410 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DEW08_23420 PF04752 ChaC-like protein DEW08_23425 PF17200 Single Cache domain 2 DEW08_23425 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain DEW08_23425 PF00672 HAMP domain DEW08_23440 PF02322 Cytochrome bd terminal oxidase subunit II DEW08_23445 PF01654 Cytochrome bd terminal oxidase subunit I DEW08_23455 PF12625 Arabinose-binding domain of AraC transcription regulator, N-term DEW08_23455 PF12833 Helix-turn-helix domain DEW08_23460 PF13520 Amino acid permease DEW08_23465 PF05985 Ethanolamine ammonia-lyase light chain (EutC) DEW08_23470 PF06751 Ethanolamine ammonia lyase large subunit (EutB) DEW08_23475 PF00574 Clp protease DEW08_23480 PF00535 Glycosyl transferase family 2 DEW08_23490 PF00149 Calcineurin-like phosphoesterase DEW08_23505 PF00561 alpha/beta hydrolase fold DEW08_23505 PF00364 Biotin-requiring enzyme DEW08_23515 PF06832 Penicillin-Binding Protein C-terminus Family DEW08_23515 PF00912 Transglycosylase DEW08_23515 PF00905 Penicillin binding protein transpeptidase domain DEW08_23520 PF04828 Glutathione-dependent formaldehyde-activating enzyme DEW08_23530 PF00394 Multicopper oxidase DEW08_23530 PF07731 Multicopper oxidase DEW08_23530 PF07732 Multicopper oxidase DEW08_23535 PF04102 SlyX DEW08_23540 PF12706 Beta-lactamase superfamily domain DEW08_23555 PF01566 Natural resistance-associated macrophage protein DEW08_23560 PF00248 Aldo/keto reductase family DEW08_23585 PF00583 Acetyltransferase (GNAT) family DEW08_23595 PF01189 16S rRNA methyltransferase RsmB/F DEW08_23595 PF01029 NusB family DEW08_23600 PF02789 Cytosol aminopeptidase family, N-terminal domain DEW08_23600 PF00883 Cytosol aminopeptidase family, catalytic domain DEW08_23610 PF00512 His Kinase A (phospho-acceptor) domain DEW08_23610 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DEW08_23620 PF01638 HxlR-like helix-turn-helix DEW08_23640 PF00117 Glutamine amidotransferase class-I DEW08_23640 PF02540 NAD synthase DEW08_23640 PF00958 GMP synthase C terminal domain DEW08_23660 PF04166 Pyridoxal phosphate biosynthetic protein PdxA DEW08_23675 PF01192 RNA polymerase Rpb6 DEW08_23680 PF02824 TGS domain DEW08_23680 PF13291 ACT domain DEW08_23680 PF04607 Region found in RelA / SpoT proteins DEW08_23685 PF01230 HIT domain DEW08_23690 PF03740 Pyridoxal phosphate biosynthesis protein PdxJ DEW08_23695 PF01648 4'-phosphopantetheinyl transferase superfamily DEW08_23700 PF10502 Signal peptidase, peptidase S26 DEW08_23705 PF14622 Ribonuclease-III-like DEW08_23705 PF00035 Double-stranded RNA binding motif DEW08_23710 PF07650 KH domain DEW08_23710 PF01926 50S ribosome-binding GTPase DEW08_23715 PF01503 Phosphoribosyl-ATP pyrophosphohydrolase DEW08_23720 PF01895 PhoU domain DEW08_23730 PF04085 rod shape-determining protein MreC DEW08_23735 PF04093 rod shape-determining protein MreD DEW08_23740 PF00905 Penicillin binding protein transpeptidase domain DEW08_23740 PF03717 Penicillin-binding Protein dimerisation domain DEW08_23745 PF10119 Predicted methyltransferase regulatory domain DEW08_23745 PF13847 Methyltransferase domain DEW08_23765 PF00005 ABC transporter DEW08_23775 PF01418 Helix-turn-helix domain, rpiR family DEW08_23775 PF01380 SIS domain DEW08_23780 PF01557 Fumarylacetoacetate (FAA) hydrolase family DEW08_23785 PF00294 pfkB family carbohydrate kinase DEW08_23790 PF17200 Single Cache domain 2 DEW08_23790 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain DEW08_23790 PF00672 HAMP domain DEW08_23795 PF02272 DHHA1 domain DEW08_23795 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain DEW08_23795 PF01411 tRNA synthetases class II (A) DEW08_23800 PF00809 Pterin binding enzyme DEW08_23805 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II DEW08_23805 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I DEW08_23805 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III DEW08_23805 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain DEW08_23810 PF08543 Phosphomethylpyrimidine kinase DEW08_23815 PF00155 Aminotransferase class I and II DEW08_23815 PF00392 Bacterial regulatory proteins, gntR family DEW08_23820 PF00106 short chain dehydrogenase DEW08_23840 PF00291 Pyridoxal-phosphate dependent enzyme DEW08_23850 PF01575 MaoC like domain DEW08_23870 PF13393 Histidyl-tRNA synthetase DEW08_23875 PF00709 Adenylosuccinate synthetase DEW08_23890 PF00140 Sigma-70 factor, region 1.2 DEW08_23890 PF04542 Sigma-70 region 2 DEW08_23890 PF04545 Sigma-70, region 4 DEW08_23905 PF01212 Beta-eliminating lyase DEW08_23915 PF13419 Haloacid dehalogenase-like hydrolase DEW08_23930 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DEW08_23930 PF00497 Bacterial extracellular solute-binding proteins, family 3 DEW08_23930 PF00512 His Kinase A (phospho-acceptor) domain DEW08_23940 PF13180 PDZ domain DEW08_23945 PF00535 Glycosyl transferase family 2 DEW08_23960 PF00480 ROK family DEW08_23980 PF02653 Branched-chain amino acid transport system / permease component DEW08_23985 PF02653 Branched-chain amino acid transport system / permease component DEW08_23985 PF11862 Domain of unknown function (DUF3382) DEW08_23995 PF00005 ABC transporter DEW08_24005 PF13458 Periplasmic binding protein DEW08_24015 PF00078 Reverse transcriptase (RNA-dependent DNA polymerase) DEW08_24035 PF00691 OmpA family DEW08_24040 PF00196 Bacterial regulatory proteins, luxR family DEW08_24040 PF00072 Response regulator receiver domain DEW08_24045 PF00672 HAMP domain DEW08_24045 PF17149 Periplasmic sensor domain found in signal transduction proteins DEW08_24045 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DEW08_24045 PF00512 His Kinase A (phospho-acceptor) domain DEW08_24045 PF01627 Hpt domain DEW08_24045 PF00072 Response regulator receiver domain DEW08_24055 PF00849 RNA pseudouridylate synthase DEW08_24060 PF05683 Fumarase C-terminus DEW08_24060 PF05681 Fumarate hydratase (Fumerase) DEW08_24065 PF00668 Condensation domain DEW08_24065 PF13193 AMP-binding enzyme C-terminal domain DEW08_24065 PF00501 AMP-binding enzyme DEW08_24065 PF00550 Phosphopantetheine attachment site DEW08_24100 PF08676 MutL C terminal dimerisation domain DEW08_24100 PF01119 DNA mismatch repair protein, C-terminal domain DEW08_24130 PF13395 HNH endonuclease DEW08_24130 PF18541 RuvC endonuclease subdomain 3 DEW08_24140 PF09827 CRISPR associated protein Cas2 DEW08_24145 PF08028 Acyl-CoA dehydrogenase, C-terminal domain DEW08_24155 PF00596 Class II Aldolase and Adducin N-terminal domain DEW08_24160 PF00296 Luciferase-like monooxygenase DEW08_24165 PF09084 NMT1/THI5 like DEW08_24170 PF00005 ABC transporter DEW08_24175 PF00528 Binding-protein-dependent transport system inner membrane component DEW08_24180 PF03466 LysR substrate binding domain DEW08_24180 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family DEW08_24195 PF05995 Cysteine dioxygenase type I DEW08_24200 PF00005 ABC transporter DEW08_24205 PF00528 Binding-protein-dependent transport system inner membrane component DEW08_24210 PF00501 AMP-binding enzyme DEW08_24210 PF14535 AMP-binding enzyme C-terminal domain DEW08_24220 PF13458 Periplasmic binding protein DEW08_24225 PF13458 Periplasmic binding protein DEW08_24230 PF02653 Branched-chain amino acid transport system / permease component DEW08_24235 PF12399 Branched-chain amino acid ATP-binding cassette transporter DEW08_24235 PF00005 ABC transporter DEW08_24240 PF00005 ABC transporter DEW08_24245 PF13454 FAD-NAD(P)-binding DEW08_24255 PF01872 RibD C-terminal domain DEW08_24255 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region DEW08_24270 PF12867 DinB superfamily DEW08_24270 PF03781 Sulfatase-modifying factor enzyme 1 DEW08_24275 PF08241 Methyltransferase domain DEW08_24280 PF03466 LysR substrate binding domain DEW08_24280 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family DEW08_24290 PF00529 HlyD membrane-fusion protein of T1SS DEW08_24290 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion DEW08_24295 PF00873 AcrB/AcrD/AcrF family DEW08_24300 PF00512 His Kinase A (phospho-acceptor) domain DEW08_24300 PF00989 PAS fold DEW08_24300 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DEW08_24305 PF00072 Response regulator receiver domain DEW08_24305 PF00196 Bacterial regulatory proteins, luxR family DEW08_24310 PF00085 Thioredoxin DEW08_24315 PF13247 4Fe-4S dicluster domain DEW08_24320 PF03916 Polysulphide reductase, NrfD DEW08_24325 PF04879 Molybdopterin oxidoreductase Fe4S4 domain DEW08_24325 PF00384 Molybdopterin oxidoreductase DEW08_24325 PF01568 Molydopterin dinucleotide binding domain DEW08_24330 PF00486 Transcriptional regulatory protein, C terminal DEW08_24330 PF00072 Response regulator receiver domain DEW08_24335 PF00672 HAMP domain DEW08_24335 PF00512 His Kinase A (phospho-acceptor) domain DEW08_24335 PF16527 Two-component sensor protein CpxA, periplasmic domain DEW08_24335 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DEW08_24355 PF00005 ABC transporter DEW08_24365 PF03466 LysR substrate binding domain DEW08_24365 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family DEW08_24375 PF08240 Alcohol dehydrogenase GroES-like domain DEW08_24375 PF00107 Zinc-binding dehydrogenase DEW08_24380 PF02653 Branched-chain amino acid transport system / permease component DEW08_24385 PF02653 Branched-chain amino acid transport system / permease component DEW08_24400 PF00248 Aldo/keto reductase family DEW08_24405 PF13407 Periplasmic binding protein domain DEW08_24410 PF00005 ABC transporter DEW08_24415 PF02653 Branched-chain amino acid transport system / permease component DEW08_24440 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion DEW08_24460 PF00561 alpha/beta hydrolase fold DEW08_24475 PF01641 SelR domain DEW08_24480 PF00296 Luciferase-like monooxygenase DEW08_24490 PF10282 Lactonase, 7-bladed beta-propeller DEW08_24495 PF00248 Aldo/keto reductase family DEW08_24515 PF01053 Cys/Met metabolism PLP-dependent enzyme DEW08_24520 PF07859 alpha/beta hydrolase fold DEW08_24525 PF13188 PAS domain DEW08_24525 PF00072 Response regulator receiver domain DEW08_24525 PF08448 PAS fold DEW08_24525 PF00512 His Kinase A (phospho-acceptor) domain DEW08_24525 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DEW08_24530 PF02779 Transketolase, pyrimidine binding domain DEW08_24530 PF02780 Transketolase, C-terminal domain DEW08_24530 PF00456 Transketolase, thiamine diphosphate binding domain DEW08_24535 PF01037 Lrp/AsnC ligand binding domain DEW08_24540 PF00005 ABC transporter DEW08_24540 PF12848 ABC transporter DEW08_24550 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain DEW08_24550 PF00672 HAMP domain DEW08_24550 PF02203 Tar ligand binding domain homologue DEW08_24560 PF00072 Response regulator receiver domain DEW08_24560 PF00196 Bacterial regulatory proteins, luxR family DEW08_24565 PF00196 Bacterial regulatory proteins, luxR family DEW08_24565 PF00072 Response regulator receiver domain DEW08_24575 PF01058 NADH ubiquinone oxidoreductase, 20 Kd subunit DEW08_24580 PF00346 Respiratory-chain NADH dehydrogenase, 49 Kd subunit DEW08_24585 PF00361 Proton-conducting membrane transporter DEW08_24595 PF00146 NADH dehydrogenase DEW08_24600 PF00361 Proton-conducting membrane transporter DEW08_24605 PF16921 Tex protein YqgF-like domain DEW08_24605 PF09371 Tex-like protein N-terminal domain DEW08_24605 PF00575 S1 RNA binding domain DEW08_24605 PF17674 HHH domain DEW08_24610 PF00563 EAL domain DEW08_24610 PF03707 Bacterial signalling protein N terminal repeat DEW08_24610 PF00990 Diguanylate cyclase, GGDEF domain DEW08_24620 PF01810 LysE type translocator DEW08_24650 PF01906 Putative heavy-metal-binding DEW08_24655 PF00561 alpha/beta hydrolase fold DEW08_24675 PF13439 Glycosyltransferase Family 4 DEW08_24675 PF00534 Glycosyl transferases group 1 DEW08_24715 PF16363 GDP-mannose 4,6 dehydratase DEW08_24720 PF00072 Response regulator receiver domain DEW08_24725 PF00043 Glutathione S-transferase, C-terminal domain DEW08_24725 PF02798 Glutathione S-transferase, N-terminal domain DEW08_24730 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DEW08_24735 PF00486 Transcriptional regulatory protein, C terminal DEW08_24735 PF00072 Response regulator receiver domain DEW08_24770 PF01458 Uncharacterized protein family (UPF0051) DEW08_24775 PF00005 ABC transporter DEW08_24780 PF01458 Uncharacterized protein family (UPF0051) DEW08_24785 PF00266 Aminotransferase class-V DEW08_24790 PF01592 NifU-like N terminal domain DEW08_24795 PF01883 Iron-sulfur cluster assembly protein DEW08_24800 PF01521 Iron-sulphur cluster biosynthesis DEW08_24805 PF00672 HAMP domain DEW08_24805 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain DEW08_24815 PF11940 Domain of unknown function (DUF3458) Ig-like fold DEW08_24815 PF01433 Peptidase family M1 domain DEW08_24815 PF17432 Domain of unknown function (DUF3458_C) ARM repeats DEW08_24820 PF00034 Cytochrome c DEW08_24835 PF01288 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK) DEW08_24850 PF04972 BON domain DEW08_24855 PF01520 N-acetylmuramoyl-L-alanine amidase DEW08_24865 PF00551 Formyl transferase DEW08_24870 PF02153 Prephenate dehydrogenase DEW08_24880 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain DEW08_24880 PF02874 ATP synthase alpha/beta family, beta-barrel domain DEW08_24880 PF18269 T3SS EscN ATPase C-terminal domain DEW08_24885 PF00486 Transcriptional regulatory protein, C terminal DEW08_24885 PF00072 Response regulator receiver domain DEW08_24890 PF00313 'Cold-shock' DNA-binding domain DEW08_24905 PF03705 CheR methyltransferase, all-alpha domain DEW08_24905 PF01739 CheR methyltransferase, SAM binding domain DEW08_24910 PF00072 Response regulator receiver domain DEW08_24910 PF01339 CheB methylesterase DEW08_24915 PF00072 Response regulator receiver domain DEW08_24915 PF08769 Sporulation initiation factor Spo0A C terminal DEW08_24920 PF01584 CheW-like domain DEW08_24925 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DEW08_24925 PF01627 Hpt domain DEW08_24925 PF01584 CheW-like domain DEW08_24925 PF02895 Signal transducing histidine kinase, homodimeric domain DEW08_24925 PF07194 P2 response regulator binding domain DEW08_24935 PF10090 Histidine phosphotransferase C-terminal domain DEW08_24945 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DEW08_24945 PF00512 His Kinase A (phospho-acceptor) domain DEW08_24955 PF13426 PAS domain DEW08_24955 PF13581 Histidine kinase-like ATPase domain DEW08_24955 PF07568 Histidine kinase DEW08_24965 PF09849 Uncharacterized protein conserved in bacteria (DUF2076) DEW08_24980 PF13426 PAS domain DEW08_24980 PF13581 Histidine kinase-like ATPase domain DEW08_24980 PF07568 Histidine kinase DEW08_24995 PF02895 Signal transducing histidine kinase, homodimeric domain DEW08_24995 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DEW08_24995 PF01627 Hpt domain DEW08_24995 PF07194 P2 response regulator binding domain DEW08_24995 PF01584 CheW-like domain DEW08_25000 PF01627 Hpt domain DEW08_25000 PF01584 CheW-like domain DEW08_25000 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DEW08_25000 PF00072 Response regulator receiver domain DEW08_25005 PF01739 CheR methyltransferase, SAM binding domain DEW08_25005 PF03705 CheR methyltransferase, all-alpha domain DEW08_25015 PF00072 Response regulator receiver domain DEW08_25015 PF01339 CheB methylesterase DEW08_25025 PF00672 HAMP domain DEW08_25025 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain DEW08_25025 PF02743 Cache domain DEW08_25035 PF05860 haemagglutination activity domain DEW08_25045 PF07015 VirC1 protein DEW08_25060 PF17284 Spermidine synthase tetramerisation domain DEW08_25065 PF02675 S-adenosylmethionine decarboxylase DEW08_25100 PF07731 Multicopper oxidase DEW08_25100 PF07732 Multicopper oxidase DEW08_25110 PF10134 Replication initiator protein A DEW08_25115 PF00083 Sugar (and other) transporter DEW08_25115 PF07690 Major Facilitator Superfamily DEW08_25120 PF00116 Cytochrome C oxidase subunit II, periplasmic domain DEW08_25120 PF06481 COX Aromatic Rich Motif DEW08_25125 PF00115 Cytochrome C and Quinol oxidase polypeptide I DEW08_25130 PF00510 Cytochrome c oxidase subunit III DEW08_25135 PF03626 Prokaryotic Cytochrome C oxidase subunit IV DEW08_25145 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DEW08_25145 PF18698 Histidine kinase sensor domain DEW08_25145 PF00672 HAMP domain DEW08_25145 PF00512 His Kinase A (phospho-acceptor) domain DEW08_25150 PF00072 Response regulator receiver domain DEW08_25155 PF02771 Acyl-CoA dehydrogenase, N-terminal domain DEW08_25155 PF02770 Acyl-CoA dehydrogenase, middle domain DEW08_25155 PF12806 Acetyl-CoA dehydrogenase C-terminal like DEW08_25155 PF00441 Acyl-CoA dehydrogenase, C-terminal domain DEW08_25160 PF08447 PAS fold DEW08_25160 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain DEW08_25170 PF00672 HAMP domain DEW08_25170 PF17200 Single Cache domain 2 DEW08_25170 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain DEW08_25175 PF06580 Histidine kinase DEW08_25175 PF07694 5TMR of 5TMR-LYT DEW08_25180 PF00072 Response regulator receiver domain DEW08_25180 PF04397 LytTr DNA-binding domain DEW08_25200 PF09084 NMT1/THI5 like DEW08_25210 PF00005 ABC transporter DEW08_25225 PF00005 ABC transporter DEW08_25255 PF13442 Cytochrome C oxidase, cbb3-type, subunit III DEW08_25260 PF13360 PQQ-like domain DEW08_25270 PF02554 Carbon starvation protein CstA DEW08_25270 PF13722 5TM C-terminal transporter carbon starvation CstA DEW08_25275 PF02901 Pyruvate formate lyase-like DEW08_25275 PF01228 Glycine radical DEW08_25285 PF00005 ABC transporter DEW08_25290 PF00528 Binding-protein-dependent transport system inner membrane component DEW08_25295 PF00497 Bacterial extracellular solute-binding proteins, family 3 DEW08_25300 PF00563 EAL domain DEW08_25300 PF08448 PAS fold DEW08_25300 PF00990 Diguanylate cyclase, GGDEF domain DEW08_25305 PF03600 Citrate transporter DEW08_25310 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component DEW08_25320 PF03480 Bacterial extracellular solute-binding protein, family 7 DEW08_25325 PF03480 Bacterial extracellular solute-binding protein, family 7 DEW08_25330 PF03812 2-keto-3-deoxygluconate permease DEW08_25340 PF04962 KduI/IolB family DEW08_25350 PF07883 Cupin domain DEW08_25355 PF03977 Na+-transporting oxaloacetate decarboxylase beta subunit DEW08_25375 PF01970 Tripartite tricarboxylate transporter TctA family DEW08_25385 PF03401 Tripartite tricarboxylate transporter family receptor DEW08_25390 PF01081 KDPG and KHG aldolase DEW08_25410 PF01155 Hydrogenase/urease nickel incorporation, metallochaperone, hypA DEW08_25415 PF12800 4Fe-4S binding domain DEW08_25415 PF13247 4Fe-4S dicluster domain DEW08_25420 PF02730 Aldehyde ferredoxin oxidoreductase, N-terminal domain DEW08_25420 PF01314 Aldehyde ferredoxin oxidoreductase, domains 2 & 3 DEW08_25435 PF00361 Proton-conducting membrane transporter DEW08_25445 PF00146 NADH dehydrogenase DEW08_25455 PF00329 Respiratory-chain NADH dehydrogenase, 30 Kd subunit DEW08_25460 PF00346 Respiratory-chain NADH dehydrogenase, 49 Kd subunit DEW08_25465 PF00672 HAMP domain DEW08_25465 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain DEW08_25470 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DEW08_25470 PF00512 His Kinase A (phospho-acceptor) domain DEW08_25470 PF08448 PAS fold DEW08_25470 PF13188 PAS domain DEW08_25470 PF00072 Response regulator receiver domain DEW08_25475 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component DEW08_25480 PF04290 Tripartite ATP-independent periplasmic transporters, DctQ component DEW08_25480 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component DEW08_25485 PF03480 Bacterial extracellular solute-binding protein, family 7 DEW08_25490 PF00392 Bacterial regulatory proteins, gntR family DEW08_25490 PF07729 FCD domain DEW08_25495 PF13409 Glutathione S-transferase, N-terminal domain DEW08_25500 PF04264 YceI-like domain DEW08_25510 PF03466 LysR substrate binding domain DEW08_25510 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family DEW08_25515 PF03786 D-mannonate dehydratase (UxuA) DEW08_25520 PF01232 Mannitol dehydrogenase Rossmann domain DEW08_25520 PF08125 Mannitol dehydrogenase C-terminal domain DEW08_25525 PF01261 Xylose isomerase-like TIM barrel DEW08_25530 PF07690 Major Facilitator Superfamily DEW08_25535 PF00069 Protein kinase domain DEW08_25535 PF03793 PASTA domain DEW08_25540 PF01226 Formate/nitrite transporter DEW08_25545 PF17391 Urocanase N-terminal domain DEW08_25545 PF01175 Urocanase Rossmann-like domain DEW08_25545 PF17392 Urocanase C-terminal domain DEW08_25550 PF00221 Aromatic amino acid lyase DEW08_25555 PF01979 Amidohydrolase family DEW08_25560 PF00392 Bacterial regulatory proteins, gntR family DEW08_25560 PF07702 UTRA domain DEW08_25565 PF00005 ABC transporter DEW08_25580 PF00497 Bacterial extracellular solute-binding proteins, family 3 DEW08_25585 PF00392 Bacterial regulatory proteins, gntR family DEW08_25585 PF07702 UTRA domain DEW08_25610 PF02653 Branched-chain amino acid transport system / permease component DEW08_25615 PF00005 ABC transporter DEW08_25620 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family DEW08_25625 PF02626 Carboxyltransferase domain, subdomain A and B DEW08_25635 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain DEW08_25635 PF00289 Biotin carboxylase, N-terminal domain DEW08_25635 PF02785 Biotin carboxylase C-terminal domain DEW08_25640 PF00364 Biotin-requiring enzyme DEW08_25645 PF03746 LamB/YcsF family DEW08_25650 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family DEW08_25650 PF03466 LysR substrate binding domain DEW08_25655 PF01568 Molydopterin dinucleotide binding domain DEW08_25655 PF18364 Molybdopterin oxidoreductase N-terminal domain DEW08_25655 PF00384 Molybdopterin oxidoreductase DEW08_25660 PF03264 NapC/NirT cytochrome c family, N-terminal region DEW08_25670 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family DEW08_25670 PF03466 LysR substrate binding domain DEW08_25675 PF03600 Citrate transporter DEW08_25690 PF01144 Coenzyme A transferase DEW08_25695 PF01144 Coenzyme A transferase DEW08_25705 PF00158 Sigma-54 interaction domain DEW08_25705 PF02954 Bacterial regulatory protein, Fis family DEW08_25705 PF13426 PAS domain DEW08_25710 PF00118 TCP-1/cpn60 chaperonin family DEW08_25715 PF02406 MmoB/DmpM family DEW08_25720 PF02332 Methane/Phenol/Toluene Hydroxylase DEW08_25725 PF00970 Oxidoreductase FAD-binding domain DEW08_25725 PF00111 2Fe-2S iron-sulfur cluster binding domain DEW08_25725 PF00175 Oxidoreductase NAD-binding domain DEW08_25730 PF02332 Methane/Phenol/Toluene Hydroxylase DEW08_25735 PF00034 Cytochrome c DEW08_25740 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily DEW08_25750 PF05199 GMC oxidoreductase DEW08_25750 PF00732 GMC oxidoreductase DEW08_25760 PF03693 Bacterial antitoxin of ParD toxin-antitoxin type II system and RHH DEW08_25765 PF01226 Formate/nitrite transporter DEW08_25785 PF00353 RTX calcium-binding nonapeptide repeat (4 copies) DEW08_25785 PF00722 Glycosyl hydrolases family 16 DEW08_25790 PF02954 Bacterial regulatory protein, Fis family DEW08_25790 PF00158 Sigma-54 interaction domain DEW08_25790 PF01590 GAF domain DEW08_25795 PF01513 ATP-NAD kinase DEW08_25800 PF00676 Dehydrogenase E1 component DEW08_25805 PF02780 Transketolase, C-terminal domain DEW08_25805 PF02779 Transketolase, pyrimidine binding domain DEW08_25810 PF00364 Biotin-requiring enzyme DEW08_25810 PF00561 alpha/beta hydrolase fold DEW08_25815 PF00106 short chain dehydrogenase DEW08_25825 PF16881 N-terminal domain of lipoyl synthase of Radical_SAM family DEW08_25825 PF04055 Radical SAM superfamily DEW08_25830 PF00356 Bacterial regulatory proteins, lacI family DEW08_25835 PF13407 Periplasmic binding protein domain DEW08_25840 PF00005 ABC transporter DEW08_25845 PF02653 Branched-chain amino acid transport system / permease component DEW08_25850 PF02653 Branched-chain amino acid transport system / permease component DEW08_25855 PF05721 Phytanoyl-CoA dioxygenase (PhyH) DEW08_25860 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain DEW08_25860 PF02743 Cache domain DEW08_25860 PF00672 HAMP domain DEW08_25865 PF01515 Phosphate acetyl/butaryl transferase DEW08_25870 PF03313 Serine dehydratase alpha chain DEW08_25870 PF03315 Serine dehydratase beta chain DEW08_25880 PF07694 5TMR of 5TMR-LYT DEW08_25880 PF06580 Histidine kinase DEW08_25885 PF00072 Response regulator receiver domain DEW08_25885 PF04397 LytTr DNA-binding domain DEW08_25910 PF00293 NUDIX domain DEW08_25910 PF13344 Haloacid dehalogenase-like hydrolase DEW08_25915 PF03466 LysR substrate binding domain DEW08_25915 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family DEW08_25930 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion DEW08_25935 PF00873 AcrB/AcrD/AcrF family DEW08_25940 PF00106 short chain dehydrogenase DEW08_25945 PF07690 Major Facilitator Superfamily DEW08_25980 PF00072 Response regulator receiver domain DEW08_25990 PF00106 short chain dehydrogenase DEW08_26010 PF00441 Acyl-CoA dehydrogenase, C-terminal domain DEW08_26010 PF02770 Acyl-CoA dehydrogenase, middle domain DEW08_26010 PF02771 Acyl-CoA dehydrogenase, N-terminal domain DEW08_26015 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family DEW08_26015 PF03466 LysR substrate binding domain DEW08_26020 PF00132 Bacterial transferase hexapeptide (six repeats) DEW08_26025 PF00072 Response regulator receiver domain DEW08_26035 PF13581 Histidine kinase-like ATPase domain DEW08_26035 PF07536 HWE histidine kinase DEW08_26035 PF13426 PAS domain DEW08_26040 PF00072 Response regulator receiver domain DEW08_26040 PF00672 HAMP domain DEW08_26040 PF01627 Hpt domain DEW08_26040 PF00512 His Kinase A (phospho-acceptor) domain DEW08_26040 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DEW08_26040 PF17149 Periplasmic sensor domain found in signal transduction proteins DEW08_26045 PF00501 AMP-binding enzyme DEW08_26045 PF13193 AMP-binding enzyme C-terminal domain DEW08_26050 PF18665 Tetracyclin repressor-like, C-terminal domain DEW08_26050 PF00440 Bacterial regulatory proteins, tetR family DEW08_26055 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain DEW08_26055 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain DEW08_26070 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 DEW08_26070 PF02378 Phosphotransferase system, EIIC DEW08_26070 PF00367 phosphotransferase system, EIIB DEW08_26075 PF13580 SIS domain DEW08_26085 PF13419 Haloacid dehalogenase-like hydrolase DEW08_26100 PF00392 Bacterial regulatory proteins, gntR family DEW08_26115 PF01979 Amidohydrolase family DEW08_26120 PF01380 SIS domain DEW08_26125 PF07992 Pyridine nucleotide-disulphide oxidoreductase DEW08_26125 PF13247 4Fe-4S dicluster domain DEW08_26125 PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster DEW08_26130 PF01180 Dihydroorotate dehydrogenase DEW08_26135 PF07687 Peptidase dimerisation domain DEW08_26135 PF01546 Peptidase family M20/M25/M40 DEW08_26140 PF00440 Bacterial regulatory proteins, tetR family DEW08_26140 PF08362 YcdC-like protein, C-terminal region DEW08_26145 PF01979 Amidohydrolase family DEW08_26155 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DEW08_26155 PF13426 PAS domain DEW08_26155 PF00072 Response regulator receiver domain DEW08_26165 PF02782 FGGY family of carbohydrate kinases, C-terminal domain DEW08_26165 PF00370 FGGY family of carbohydrate kinases, N-terminal domain DEW08_26170 PF00294 pfkB family carbohydrate kinase DEW08_26180 PF02653 Branched-chain amino acid transport system / permease component DEW08_26185 PF02653 Branched-chain amino acid transport system / permease component DEW08_26190 PF00005 ABC transporter DEW08_26195 PF13407 Periplasmic binding protein domain DEW08_26200 PF01791 DeoC/LacD family aldolase DEW08_26205 PF00455 DeoR C terminal sensor domain DEW08_26205 PF08220 DeoR-like helix-turn-helix domain DEW08_26210 PF00027 Cyclic nucleotide-binding domain DEW08_26210 PF00005 ABC transporter DEW08_26215 PF00005 ABC transporter DEW08_26215 PF08352 Oligopeptide/dipeptide transporter, C-terminal region DEW08_26220 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle DEW08_26225 PF00528 Binding-protein-dependent transport system inner membrane component DEW08_26230 PF12911 N-terminal TM domain of oligopeptide transport permease C DEW08_26230 PF00528 Binding-protein-dependent transport system inner membrane component DEW08_26240 PF00534 Glycosyl transferases group 1 DEW08_26245 PF13439 Glycosyltransferase Family 4 DEW08_26245 PF00534 Glycosyl transferases group 1 DEW08_26250 PF00300 Histidine phosphatase superfamily (branch 1) DEW08_26265 PF01037 Lrp/AsnC ligand binding domain DEW08_26270 PF14850 DNA-binding domain of Proline dehydrogenase DEW08_26270 PF00171 Aldehyde dehydrogenase family DEW08_26270 PF01619 Proline dehydrogenase DEW08_26270 PF18327 Proline utilization A proline dehydrogenase N-terminal domain DEW08_26275 PF01609 Transposase DDE domain DEW08_26275 PF13808 DDE_Tnp_1-associated DEW08_26280 PF04199 Putative cyclase DEW08_26295 PF01613 Flavin reductase like domain DEW08_26310 PF12833 Helix-turn-helix domain DEW08_26310 PF14525 AraC-binding-like domain DEW08_26315 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain DEW08_26315 PF00672 HAMP domain DEW08_26320 PF00440 Bacterial regulatory proteins, tetR family DEW08_26330 PF00593 TonB dependent receptor DEW08_26330 PF07715 TonB-dependent Receptor Plug Domain DEW08_26335 PF05962 HutD DEW08_26340 PF03264 NapC/NirT cytochrome c family, N-terminal region DEW08_26345 PF03892 Nitrate reductase cytochrome c-type subunit (NapB) DEW08_26350 PF13237 4Fe-4S dicluster domain DEW08_26350 PF12801 4Fe-4S binding domain DEW08_26355 PF12838 4Fe-4S dicluster domain DEW08_26355 PF12800 4Fe-4S binding domain DEW08_26360 PF04879 Molybdopterin oxidoreductase Fe4S4 domain DEW08_26360 PF01568 Molydopterin dinucleotide binding domain DEW08_26360 PF00384 Molybdopterin oxidoreductase DEW08_26380 PF00092 von Willebrand factor type A domain DEW08_26385 PF07728 AAA domain (dynein-related subfamily) DEW08_26385 PF08406 CbbQ/NirQ/NorQ C-terminal DEW08_26390 PF00115 Cytochrome C and Quinol oxidase polypeptide I DEW08_26395 PF00034 Cytochrome c DEW08_26425 PF00171 Aldehyde dehydrogenase family DEW08_26430 PF00202 Aminotransferase class-III DEW08_26435 PF03466 LysR substrate binding domain DEW08_26435 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family DEW08_26440 PF00005 ABC transporter DEW08_26445 PF00528 Binding-protein-dependent transport system inner membrane component DEW08_26450 PF00528 Binding-protein-dependent transport system inner membrane component DEW08_26465 PF05088 Bacterial NAD-glutamate dehydrogenase DEW08_26470 PF03466 LysR substrate binding domain DEW08_26470 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family DEW08_26475 PF02423 Ornithine cyclodeaminase/mu-crystallin family DEW08_26480 PF00491 Arginase family DEW08_26490 PF00005 ABC transporter DEW08_26495 PF00497 Bacterial extracellular solute-binding proteins, family 3 DEW08_26500 PF00528 Binding-protein-dependent transport system inner membrane component DEW08_26505 PF00528 Binding-protein-dependent transport system inner membrane component DEW08_26510 PF03707 Bacterial signalling protein N terminal repeat DEW08_26510 PF00563 EAL domain DEW08_26510 PF00990 Diguanylate cyclase, GGDEF domain DEW08_26515 PF13188 PAS domain DEW08_26515 PF00990 Diguanylate cyclase, GGDEF domain DEW08_26515 PF03707 Bacterial signalling protein N terminal repeat DEW08_26515 PF00563 EAL domain DEW08_26520 PF07690 Major Facilitator Superfamily DEW08_26525 PF00128 Alpha amylase, catalytic domain DEW08_26565 PF00106 short chain dehydrogenase DEW08_26575 PF00474 Sodium:solute symporter family DEW08_26580 PF04341 Protein of unknown function, DUF485 DEW08_26590 PF00072 Response regulator receiver domain DEW08_26590 PF00486 Transcriptional regulatory protein, C terminal DEW08_26595 PF00501 AMP-binding enzyme DEW08_26595 PF13193 AMP-binding enzyme C-terminal domain DEW08_26600 PF01012 Electron transfer flavoprotein domain DEW08_26605 PF00766 Electron transfer flavoprotein FAD-binding domain DEW08_26605 PF01012 Electron transfer flavoprotein domain DEW08_26610 PF12806 Acetyl-CoA dehydrogenase C-terminal like DEW08_26610 PF02770 Acyl-CoA dehydrogenase, middle domain DEW08_26610 PF00441 Acyl-CoA dehydrogenase, C-terminal domain DEW08_26610 PF02771 Acyl-CoA dehydrogenase, N-terminal domain DEW08_26615 PF00392 Bacterial regulatory proteins, gntR family DEW08_26615 PF07729 FCD domain DEW08_26620 PF02142 MGS-like domain DEW08_26625 PF02614 Glucuronate isomerase DEW08_26630 PF08666 SAF domain DEW08_26630 PF04295 D-galactarate dehydratase / Altronate hydrolase, C terminus DEW08_26635 PF02222 ATP-grasp domain DEW08_26645 PF03390 2-hydroxycarboxylate transporter family DEW08_26655 PF01874 ATP:dephospho-CoA triphosphoribosyl transferase DEW08_26660 PF03802 Apo-citrate lyase phosphoribosyl-dephospho-CoA transferase DEW08_26665 PF04223 Citrate lyase, alpha subunit (CitF) DEW08_26670 PF03328 HpcH/HpaI aldolase/citrate lyase family DEW08_26675 PF06857 Malonate decarboxylase delta subunit (MdcD) DEW08_26680 PF08218 Citrate lyase ligase C-terminal domain DEW08_26685 PF01557 Fumarylacetoacetate (FAA) hydrolase family DEW08_26690 PF00390 Malic enzyme, N-terminal domain DEW08_26690 PF01515 Phosphate acetyl/butaryl transferase DEW08_26690 PF03949 Malic enzyme, NAD binding domain DEW08_26695 PF00512 His Kinase A (phospho-acceptor) domain DEW08_26695 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DEW08_26700 PF00072 Response regulator receiver domain DEW08_26700 PF00486 Transcriptional regulatory protein, C terminal DEW08_26705 PF05145 Transition state regulatory protein AbrB DEW08_26715 PF00005 ABC transporter DEW08_26720 PF01032 FecCD transport family DEW08_26725 PF01032 FecCD transport family DEW08_26730 PF01497 Periplasmic binding protein DEW08_26735 PF03551 Transcriptional regulator PadR-like family DEW08_26745 PF07729 FCD domain DEW08_26745 PF00392 Bacterial regulatory proteins, gntR family DEW08_26750 PF03786 D-mannonate dehydratase (UxuA) DEW08_26755 PF00106 short chain dehydrogenase DEW08_26760 PF07729 FCD domain DEW08_26760 PF00392 Bacterial regulatory proteins, gntR family DEW08_26765 PF07729 FCD domain DEW08_26765 PF00392 Bacterial regulatory proteins, gntR family DEW08_26770 PF00005 ABC transporter DEW08_26770 PF08402 TOBE domain DEW08_26780 PF00528 Binding-protein-dependent transport system inner membrane component DEW08_26785 PF00528 Binding-protein-dependent transport system inner membrane component DEW08_26790 PF01177 Asp/Glu/Hydantoin racemase DEW08_26800 PF03313 Serine dehydratase alpha chain DEW08_26800 PF03315 Serine dehydratase beta chain DEW08_26810 PF00078 Reverse transcriptase (RNA-dependent DNA polymerase) DEW08_26820 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit DEW08_26825 PF00294 pfkB family carbohydrate kinase DEW08_26830 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 DEW08_26830 PF00381 PTS HPr component phosphorylation site DEW08_26830 PF02896 PEP-utilising enzyme, TIM barrel domain DEW08_26830 PF00391 PEP-utilising enzyme, mobile domain DEW08_26830 PF05524 PEP-utilising enzyme, N-terminal DEW08_26835 PF00356 Bacterial regulatory proteins, lacI family DEW08_26840 PF00561 alpha/beta hydrolase fold DEW08_26845 PF00202 Aminotransferase class-III DEW08_26850 PF00367 phosphotransferase system, EIIB DEW08_26850 PF02378 Phosphotransferase system, EIIC DEW08_26860 PF02896 PEP-utilising enzyme, TIM barrel domain DEW08_26860 PF05524 PEP-utilising enzyme, N-terminal DEW08_26860 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 DEW08_26860 PF00381 PTS HPr component phosphorylation site DEW08_26860 PF00391 PEP-utilising enzyme, mobile domain DEW08_26865 PF00005 ABC transporter DEW08_26870 PF00005 ABC transporter DEW08_26875 PF00528 Binding-protein-dependent transport system inner membrane component DEW08_26880 PF00528 Binding-protein-dependent transport system inner membrane component DEW08_26885 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle DEW08_26890 PF08753 NikR C terminal nickel binding domain DEW08_26890 PF01402 Ribbon-helix-helix protein, copG family DEW08_26895 PF00353 RTX calcium-binding nonapeptide repeat (4 copies) DEW08_26895 PF00722 Glycosyl hydrolases family 16 DEW08_26930 PF13649 Methyltransferase domain DEW08_26935 PF05711 Macrocin-O-methyltransferase (TylF) DEW08_26940 PF18364 Molybdopterin oxidoreductase N-terminal domain DEW08_26940 PF01568 Molydopterin dinucleotide binding domain DEW08_26940 PF00384 Molybdopterin oxidoreductase DEW08_26955 PF03264 NapC/NirT cytochrome c family, N-terminal region DEW08_26960 PF00486 Transcriptional regulatory protein, C terminal DEW08_26960 PF00072 Response regulator receiver domain DEW08_26965 PF01627 Hpt domain DEW08_26965 PF00512 His Kinase A (phospho-acceptor) domain DEW08_26965 PF00072 Response regulator receiver domain DEW08_26965 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DEW08_26965 PF00672 HAMP domain DEW08_26965 PF17149 Periplasmic sensor domain found in signal transduction proteins DEW08_26970 PF00355 Rieske [2Fe-2S] domain DEW08_26995 PF12399 Branched-chain amino acid ATP-binding cassette transporter DEW08_26995 PF00005 ABC transporter DEW08_27000 PF00005 ABC transporter DEW08_27005 PF13458 Periplasmic binding protein DEW08_27010 PF07690 Major Facilitator Superfamily DEW08_27020 PF00171 Aldehyde dehydrogenase family DEW08_27025 PF00378 Enoyl-CoA hydratase/isomerase DEW08_27065 PF08352 Oligopeptide/dipeptide transporter, C-terminal region DEW08_27065 PF00005 ABC transporter DEW08_27070 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle DEW08_27080 PF00528 Binding-protein-dependent transport system inner membrane component DEW08_27085 PF12911 N-terminal TM domain of oligopeptide transport permease C DEW08_27085 PF00528 Binding-protein-dependent transport system inner membrane component DEW08_27095 PF02887 Pyruvate kinase, alpha/beta domain DEW08_27095 PF00224 Pyruvate kinase, barrel domain DEW08_27100 PF01263 Aldose 1-epimerase DEW08_27105 PF02554 Carbon starvation protein CstA DEW08_27105 PF13722 5TM C-terminal transporter carbon starvation CstA DEW08_27115 PF00920 Dehydratase family DEW08_27120 PF02447 GntP family permease DEW08_27125 PF01202 Shikimate kinase DEW08_27130 PF00484 Carbonic anhydrase DEW08_27135 PF01418 Helix-turn-helix domain, rpiR family DEW08_27135 PF01380 SIS domain DEW08_27135 PF02685 Glucokinase DEW08_27145 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain DEW08_27145 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain DEW08_27155 PF01228 Glycine radical DEW08_27155 PF02901 Pyruvate formate lyase-like DEW08_27160 PF04055 Radical SAM superfamily DEW08_27165 PF01226 Formate/nitrite transporter DEW08_27170 PF01515 Phosphate acetyl/butaryl transferase DEW08_27175 PF00871 Acetokinase family DEW08_27180 PF00892 EamA-like transporter family DEW08_27185 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain DEW08_27185 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain DEW08_27195 PF00294 pfkB family carbohydrate kinase DEW08_27200 PF07729 FCD domain DEW08_27200 PF00392 Bacterial regulatory proteins, gntR family DEW08_27205 PF01081 KDPG and KHG aldolase DEW08_27210 PF12282 Signal transduction histidine kinase DEW08_27210 PF07568 Histidine kinase DEW08_27210 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DEW08_27215 PF00072 Response regulator receiver domain DEW08_27240 PF00005 ABC transporter DEW08_27245 PF00528 Binding-protein-dependent transport system inner membrane component DEW08_27255 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DEW08_27255 PF00512 His Kinase A (phospho-acceptor) domain DEW08_27255 PF00989 PAS fold DEW08_27270 PF00171 Aldehyde dehydrogenase family DEW08_27275 PF13186 Iron-sulfur cluster-binding domain DEW08_27275 PF04055 Radical SAM superfamily DEW08_27280 PF05402 Coenzyme PQQ synthesis protein D (PqqD) DEW08_27285 PF03070 TENA/THI-4/PQQC family DEW08_27290 PF12706 Beta-lactamase superfamily domain DEW08_27305 PF00196 Bacterial regulatory proteins, luxR family DEW08_27305 PF00072 Response regulator receiver domain DEW08_27345 PF00005 ABC transporter DEW08_27355 PF00672 HAMP domain DEW08_27355 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain DEW08_27355 PF02743 Cache domain DEW08_27360 PF05193 Peptidase M16 inactive domain DEW08_27360 PF00675 Insulinase (Peptidase family M16) DEW08_27365 PF00072 Response regulator receiver domain DEW08_27365 PF13426 PAS domain DEW08_27365 PF00512 His Kinase A (phospho-acceptor) domain DEW08_27365 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DEW08_27365 PF08448 PAS fold DEW08_27375 PF00374 Nickel-dependent hydrogenase DEW08_27395 PF01750 Hydrogenase maturation protease DEW08_27400 PF01455 HupF/HypC family DEW08_27405 PF07449 Hydrogenase-1 expression protein HyaE DEW08_27410 PF04809 HupH hydrogenase expression protein, C-terminal conserved region DEW08_27415 PF00301 Rubredoxin DEW08_27415 PF11939 [NiFe]-hydrogenase assembly, chaperone, HybE DEW08_27425 PF01155 Hydrogenase/urease nickel incorporation, metallochaperone, hypA DEW08_27430 PF02492 CobW/HypB/UreG, nucleotide-binding domain DEW08_27435 PF00158 Sigma-54 interaction domain DEW08_27435 PF00072 Response regulator receiver domain DEW08_27435 PF02954 Bacterial regulatory protein, Fis family DEW08_27440 PF01455 HupF/HypC family DEW08_27445 PF01924 Hydrogenase formation hypA family DEW08_27450 PF00586 AIR synthase related protein, N-terminal domain DEW08_27450 PF02769 AIR synthase related protein, C-terminal domain DEW08_27460 PF01058 NADH ubiquinone oxidoreductase, 20 Kd subunit DEW08_27460 PF14720 NiFe/NiFeSe hydrogenase small subunit C-terminal DEW08_27470 PF01292 Prokaryotic cytochrome b561 DEW08_27485 PF17788 HypF Kae1-like domain DEW08_27485 PF07503 HypF finger DEW08_27485 PF00708 Acylphosphatase DEW08_27485 PF01300 Telomere recombination DEW08_27490 PF03466 LysR substrate binding domain DEW08_27490 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family DEW08_27495 PF10417 C-terminal domain of 1-Cys peroxiredoxin DEW08_27495 PF00578 AhpC/TSA family DEW08_27500 PF13192 Thioredoxin domain DEW08_27500 PF07992 Pyridine nucleotide-disulphide oxidoreductase DEW08_27505 PF07568 Histidine kinase DEW08_27505 PF13426 PAS domain DEW08_27505 PF13581 Histidine kinase-like ATPase domain DEW08_27550 PF08220 DeoR-like helix-turn-helix domain DEW08_27550 PF00455 DeoR C terminal sensor domain DEW08_27555 PF17042 Nucleotide-binding C-terminal domain DEW08_27555 PF07005 Sugar-binding N-terminal domain DEW08_27560 PF04166 Pyridoxal phosphate biosynthetic protein PdxA DEW08_27565 PF00356 Bacterial regulatory proteins, lacI family DEW08_27570 PF03480 Bacterial extracellular solute-binding protein, family 7 DEW08_27575 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component DEW08_27585 PF03070 TENA/THI-4/PQQC family DEW08_27605 PF01758 Sodium Bile acid symporter family DEW08_27615 PF07715 TonB-dependent Receptor Plug Domain DEW08_27615 PF00593 TonB dependent receptor DEW08_27625 PF01427 D-ala-D-ala dipeptidase DEW08_27630 PF04962 KduI/IolB family DEW08_27635 PF01380 SIS domain DEW08_27635 PF01418 Helix-turn-helix domain, rpiR family DEW08_27640 PF01408 Oxidoreductase family, NAD-binding Rossmann fold DEW08_27640 PF02894 Oxidoreductase family, C-terminal alpha/beta domain DEW08_27645 PF01408 Oxidoreductase family, NAD-binding Rossmann fold DEW08_27645 PF02894 Oxidoreductase family, C-terminal alpha/beta domain DEW08_27650 PF02653 Branched-chain amino acid transport system / permease component DEW08_27655 PF00005 ABC transporter DEW08_27660 PF13407 Periplasmic binding protein domain DEW08_27665 PF00171 Aldehyde dehydrogenase family DEW08_27670 PF01261 Xylose isomerase-like TIM barrel DEW08_27675 PF00205 Thiamine pyrophosphate enzyme, central domain DEW08_27675 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain DEW08_27675 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain DEW08_27680 PF00294 pfkB family carbohydrate kinase DEW08_27685 PF12838 4Fe-4S dicluster domain DEW08_27685 PF04879 Molybdopterin oxidoreductase Fe4S4 domain DEW08_27685 PF00384 Molybdopterin oxidoreductase DEW08_27685 PF01568 Molydopterin dinucleotide binding domain DEW08_27685 PF10588 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region DEW08_27690 PF10589 NADH-ubiquinone oxidoreductase-F iron-sulfur binding region DEW08_27690 PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit DEW08_27690 PF10531 SLBB domain DEW08_27695 PF00248 Aldo/keto reductase family DEW08_27705 PF01936 NYN domain DEW08_27715 PF00440 Bacterial regulatory proteins, tetR family DEW08_27720 PF04069 Substrate binding domain of ABC-type glycine betaine transport system DEW08_27725 PF00528 Binding-protein-dependent transport system inner membrane component DEW08_27730 PF00571 CBS domain DEW08_27730 PF00005 ABC transporter DEW08_27735 PF01810 LysE type translocator DEW08_27740 PF01235 Sodium:alanine symporter family DEW08_27745 PF02447 GntP family permease DEW08_27750 PF14552 Tautomerase enzyme DEW08_27755 PF03466 LysR substrate binding domain DEW08_27755 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family DEW08_27765 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family DEW08_27765 PF00356 Bacterial regulatory proteins, lacI family DEW08_27770 PF08125 Mannitol dehydrogenase C-terminal domain DEW08_27770 PF01232 Mannitol dehydrogenase Rossmann domain DEW08_27775 PF07690 Major Facilitator Superfamily DEW08_27780 PF07992 Pyridine nucleotide-disulphide oxidoreductase DEW08_27815 PF00672 HAMP domain DEW08_27815 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain DEW08_27820 PF01047 MarR family DEW08_27825 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component DEW08_27835 PF03480 Bacterial extracellular solute-binding protein, family 7 DEW08_27840 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain DEW08_27840 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain DEW08_27845 PF02558 Ketopantoate reductase PanE/ApbA DEW08_27845 PF02317 NAD/NADP octopine/nopaline dehydrogenase, alpha-helical domain DEW08_27855 PF13458 Periplasmic binding protein DEW08_27860 PF02653 Branched-chain amino acid transport system / permease component DEW08_27870 PF00005 ABC transporter DEW08_27870 PF12399 Branched-chain amino acid ATP-binding cassette transporter DEW08_27875 PF00005 ABC transporter DEW08_27890 PF01609 Transposase DDE domain DEW08_27890 PF13808 DDE_Tnp_1-associated DEW08_27895 PF01609 Transposase DDE domain DEW08_27895 PF13808 DDE_Tnp_1-associated DEW08_27915 PF00501 AMP-binding enzyme DEW08_27915 PF13193 AMP-binding enzyme C-terminal domain DEW08_27920 PF01757 Acyltransferase family DEW08_27925 PF03328 HpcH/HpaI aldolase/citrate lyase family DEW08_27930 PF13614 AAA domain DEW08_27935 PF17762 HTH domain found in ParB protein DEW08_27935 PF02195 ParB-like nuclease domain DEW08_27960 PF00664 ABC transporter transmembrane region DEW08_27960 PF00005 ABC transporter DEW08_27970 PF01384 Phosphate transporter family DEW08_28010 PF00155 Aminotransferase class I and II DEW08_28015 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain DEW08_28015 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain DEW08_28025 PF17862 AAA+ lid domain DEW08_28025 PF00004 ATPase family associated with various cellular activities (AAA) DEW08_28025 PF01434 Peptidase family M41 DEW08_28145 PF00083 Sugar (and other) transporter DEW08_28150 PF00512 His Kinase A (phospho-acceptor) domain DEW08_28150 PF00072 Response regulator receiver domain DEW08_28150 PF01627 Hpt domain DEW08_28150 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DEW08_28150 PF00672 HAMP domain DEW08_28155 PF00196 Bacterial regulatory proteins, luxR family DEW08_28155 PF00072 Response regulator receiver domain DEW08_28165 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DEW08_28165 PF00989 PAS fold DEW08_28165 PF00512 His Kinase A (phospho-acceptor) domain DEW08_28180 PF07992 Pyridine nucleotide-disulphide oxidoreductase DEW08_28180 PF00724 NADH:flavin oxidoreductase / NADH oxidase family DEW08_28185 PF12706 Beta-lactamase superfamily domain DEW08_28185 PF17770 Ribonuclease J C-terminal domain DEW08_28185 PF07521 Zn-dependent metallo-hydrolase RNA specificity domain DEW08_28190 PF00860 Permease family DEW08_28200 PF01895 PhoU domain DEW08_28225 PF00072 Response regulator receiver domain DEW08_28230 PF17149 Periplasmic sensor domain found in signal transduction proteins DEW08_28230 PF00072 Response regulator receiver domain DEW08_28230 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DEW08_28230 PF00672 HAMP domain DEW08_28230 PF01627 Hpt domain DEW08_28230 PF00512 His Kinase A (phospho-acceptor) domain DEW08_28245 PF00775 Dioxygenase DEW08_28250 PF12391 Protocatechuate 3,4-dioxygenase beta subunit N terminal DEW08_28250 PF00775 Dioxygenase DEW08_28255 PF10397 Adenylosuccinate lyase C-terminus DEW08_28255 PF00206 Lyase DEW08_28260 PF02627 Carboxymuconolactone decarboxylase family DEW08_28265 PF12146 Serine aminopeptidase, S33 DEW08_28270 PF02803 Thiolase, C-terminal domain DEW08_28270 PF00108 Thiolase, N-terminal domain DEW08_28275 PF01144 Coenzyme A transferase DEW08_28280 PF01144 Coenzyme A transferase DEW08_28285 PF13458 Periplasmic binding protein DEW08_28300 PF00005 ABC transporter DEW08_28300 PF12399 Branched-chain amino acid ATP-binding cassette transporter DEW08_28305 PF00005 ABC transporter DEW08_28325 PF01494 FAD binding domain DEW08_28335 PF00132 Bacterial transferase hexapeptide (six repeats) DEW08_28335 PF06426 Serine acetyltransferase, N-terminal DEW08_28340 PF05025 RbsD / FucU transport protein family DEW08_28345 PF00005 ABC transporter DEW08_28350 PF02653 Branched-chain amino acid transport system / permease component DEW08_28355 PF13407 Periplasmic binding protein domain DEW08_28360 PF00356 Bacterial regulatory proteins, lacI family DEW08_28370 PF00282 Pyridoxal-dependent decarboxylase conserved domain DEW08_28375 PF01037 Lrp/AsnC ligand binding domain DEW08_28380 PF00072 Response regulator receiver domain DEW08_28385 PF03264 NapC/NirT cytochrome c family, N-terminal region DEW08_28390 PF03892 Nitrate reductase cytochrome c-type subunit (NapB) DEW08_28395 PF00384 Molybdopterin oxidoreductase DEW08_28395 PF01568 Molydopterin dinucleotide binding domain DEW08_28395 PF04879 Molybdopterin oxidoreductase Fe4S4 domain DEW08_28410 PF06796 Periplasmic nitrate reductase protein NapE DEW08_28420 PF00990 Diguanylate cyclase, GGDEF domain DEW08_28420 PF03707 Bacterial signalling protein N terminal repeat DEW08_28420 PF00563 EAL domain DEW08_28430 PF02770 Acyl-CoA dehydrogenase, middle domain DEW08_28430 PF00441 Acyl-CoA dehydrogenase, C-terminal domain DEW08_28430 PF02771 Acyl-CoA dehydrogenase, N-terminal domain DEW08_28435 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain DEW08_28435 PF00672 HAMP domain DEW08_28440 PF01144 Coenzyme A transferase DEW08_28445 PF01144 Coenzyme A transferase DEW08_28450 PF00106 short chain dehydrogenase DEW08_28455 PF00860 Permease family DEW08_28460 PF02659 Putative manganese efflux pump DEW08_28465 PF01979 Amidohydrolase family DEW08_28475 PF00873 AcrB/AcrD/AcrF family DEW08_28490 PF02446 4-alpha-glucanotransferase DEW08_28500 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) DEW08_28500 PF00128 Alpha amylase, catalytic domain DEW08_28505 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) DEW08_28505 PF00128 Alpha amylase, catalytic domain DEW08_28505 PF02806 Alpha amylase, C-terminal all-beta domain DEW08_28510 PF00128 Alpha amylase, catalytic domain DEW08_28510 PF16657 Maltogenic Amylase, C-terminal domain DEW08_28515 PF00860 Permease family DEW08_28520 PF13593 SBF-like CPA transporter family (DUF4137) DEW08_28525 PF12973 ChrR Cupin-like domain DEW08_28530 PF04545 Sigma-70, region 4 DEW08_28530 PF04542 Sigma-70 region 2 DEW08_28535 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain DEW08_28535 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain DEW08_28535 PF00205 Thiamine pyrophosphate enzyme, central domain DEW08_28590 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain DEW08_28590 PF00205 Thiamine pyrophosphate enzyme, central domain DEW08_28590 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain DEW08_28595 PF00005 ABC transporter DEW08_28605 PF02632 BioY family DEW08_28610 PF00501 AMP-binding enzyme DEW08_28610 PF13193 AMP-binding enzyme C-terminal domain DEW08_28615 PF02803 Thiolase, C-terminal domain DEW08_28615 PF00108 Thiolase, N-terminal domain DEW08_28645 PF00512 His Kinase A (phospho-acceptor) domain DEW08_28645 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) DEW08_28645 PF00672 HAMP domain DEW08_28645 PF00072 Response regulator receiver domain DEW08_28645 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DEW08_28645 PF01627 Hpt domain DEW08_28660 PF00174 Oxidoreductase molybdopterin binding domain DEW08_28665 PF01794 Ferric reductase like transmembrane component DEW08_28670 PF01738 Dienelactone hydrolase family DEW08_28690 PF00005 ABC transporter DEW08_28695 PF12399 Branched-chain amino acid ATP-binding cassette transporter DEW08_28695 PF00005 ABC transporter DEW08_28720 PF02885 Glycosyl transferase family, helical bundle domain DEW08_28720 PF00591 Glycosyl transferase family, a/b domain DEW08_28720 PF07831 Pyrimidine nucleoside phosphorylase C-terminal domain DEW08_28725 PF01791 DeoC/LacD family aldolase DEW08_28730 PF01048 Phosphorylase superfamily DEW08_28735 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region DEW08_28750 PF01878 EVE domain DEW08_28760 PF13280 WYL domain DEW08_28760 PF08279 HTH domain DEW08_28795 PF01066 CDP-alcohol phosphatidyltransferase DEW08_28800 PF02666 Phosphatidylserine decarboxylase DEW08_28810 PF14714 KH-domain-like of EngA bacterial GTPase enzymes, C-terminal DEW08_28810 PF01926 50S ribosome-binding GTPase DEW08_28815 PF02608 ABC transporter substrate-binding protein PnrA-like DEW08_28845 PF01571 Aminomethyltransferase folate-binding domain DEW08_28860 PF13419 Haloacid dehalogenase-like hydrolase DEW08_28865 PF01479 S4 domain DEW08_28865 PF00849 RNA pseudouridylate synthase DEW08_28870 PF02537 CrcB-like protein, Camphor Resistance (CrcB) DEW08_28875 PF00857 Isochorismatase family DEW08_28885 PF12002 MgsA AAA+ ATPase C terminal DEW08_28885 PF16193 AAA C-terminal domain DEW08_28885 PF00004 ATPase family associated with various cellular activities (AAA) DEW08_28900 PF09335 SNARE associated Golgi protein DEW08_28905 PF01196 Ribosomal protein L17 DEW08_28910 PF03118 Bacterial RNA polymerase, alpha chain C terminal domain DEW08_28910 PF01193 RNA polymerase Rpb3/Rpb11 dimerisation domain DEW08_28910 PF01000 RNA polymerase Rpb3/RpoA insert domain DEW08_28915 PF00411 Ribosomal protein S11 DEW08_28920 PF00416 Ribosomal protein S13/S18 DEW08_28925 PF01609 Transposase DDE domain DEW08_28925 PF13808 DDE_Tnp_1-associated DEW08_28930 PF00224 Pyruvate kinase, barrel domain DEW08_28930 PF02887 Pyruvate kinase, alpha/beta domain DEW08_28945 PF00009 Elongation factor Tu GTP binding domain DEW08_28945 PF03764 Elongation factor G, domain IV DEW08_28945 PF14492 Elongation Factor G, domain II DEW08_28945 PF00679 Elongation factor G C-terminus DEW08_28945 PF03144 Elongation factor Tu domain 2 DEW08_28950 PF01042 Endoribonuclease L-PSP DEW08_28960 PF01131 DNA topoisomerase DEW08_28960 PF01751 Toprim domain DEW08_28965 PF00766 Electron transfer flavoprotein FAD-binding domain DEW08_28965 PF01012 Electron transfer flavoprotein domain DEW08_28970 PF01012 Electron transfer flavoprotein domain DEW08_28975 PF00441 Acyl-CoA dehydrogenase, C-terminal domain DEW08_28975 PF02770 Acyl-CoA dehydrogenase, middle domain DEW08_28975 PF02771 Acyl-CoA dehydrogenase, N-terminal domain DEW08_28985 PF13533 Biotin-lipoyl like DEW08_28995 PF00873 AcrB/AcrD/AcrF family DEW08_29000 PF04542 Sigma-70 region 2 DEW08_29000 PF08281 Sigma-70, region 4 DEW08_29015 PF00106 short chain dehydrogenase DEW08_29015 PF00561 alpha/beta hydrolase fold DEW08_29040 PF11896 Domain of unknown function (DUF3416) DEW08_29040 PF00128 Alpha amylase, catalytic domain DEW08_29045 PF03976 Polyphosphate kinase 2 (PPK2) DEW08_29050 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain DEW08_29050 PF00672 HAMP domain DEW08_29050 PF02743 Cache domain DEW08_29055 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain DEW08_29055 PF02743 Cache domain DEW08_29055 PF00672 HAMP domain DEW08_29065 PF01850 PIN domain DEW08_29085 PF07690 Major Facilitator Superfamily DEW08_29100 PF09859 Oxygenase, catalysing oxidative methylation of damaged DNA DEW08_29105 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain DEW08_29105 PF12833 Helix-turn-helix domain DEW08_29105 PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain DEW08_29105 PF02805 Metal binding domain of Ada DEW08_29115 PF12833 Helix-turn-helix domain DEW08_29125 PF13458 Periplasmic binding protein DEW08_29140 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle DEW08_29145 PF00528 Binding-protein-dependent transport system inner membrane component DEW08_29150 PF12911 N-terminal TM domain of oligopeptide transport permease C DEW08_29150 PF00528 Binding-protein-dependent transport system inner membrane component DEW08_29155 PF07969 Amidohydrolase family DEW08_29170 PF00005 ABC transporter DEW08_29170 PF08352 Oligopeptide/dipeptide transporter, C-terminal region DEW08_29175 PF08352 Oligopeptide/dipeptide transporter, C-terminal region DEW08_29175 PF00005 ABC transporter DEW08_29185 PF01810 LysE type translocator DEW08_29195 PF17757 UvrB interaction domain DEW08_29195 PF00271 Helicase conserved C-terminal domain DEW08_29195 PF00270 DEAD/DEAH box helicase DEW08_29195 PF02559 CarD-like/TRCF domain DEW08_29195 PF03461 TRCF domain DEW08_29200 PF00140 Sigma-70 factor, region 1.2 DEW08_29200 PF04542 Sigma-70 region 2 DEW08_29200 PF04545 Sigma-70, region 4 DEW08_29215 PF00135 Carboxylesterase family DEW08_29220 PF08447 PAS fold DEW08_29220 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain DEW08_29225 PF01037 Lrp/AsnC ligand binding domain DEW08_29245 PF06224 Winged helix DNA-binding domain DEW08_29260 PF00795 Carbon-nitrogen hydrolase DEW08_29260 PF02540 NAD synthase DEW08_29265 PF11975 Family 4 glycosyl hydrolase C-terminal domain DEW08_29265 PF02056 Family 4 glycosyl hydrolase DEW08_29275 PF06472 ABC transporter transmembrane region 2 DEW08_29275 PF00005 ABC transporter DEW08_29295 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain DEW08_29295 PF00672 HAMP domain DEW08_29305 PF00005 ABC transporter DEW08_29315 PF11862 Domain of unknown function (DUF3382) DEW08_29315 PF02653 Branched-chain amino acid transport system / permease component DEW08_29320 PF02653 Branched-chain amino acid transport system / permease component DEW08_29330 PF01262 Alanine dehydrogenase/PNT, C-terminal domain DEW08_29330 PF05222 Alanine dehydrogenase/PNT, N-terminal domain DEW08_29335 PF01037 Lrp/AsnC ligand binding domain DEW08_29340 PF03466 LysR substrate binding domain DEW08_29340 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family DEW08_29345 PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase DEW08_29345 PF01315 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain DEW08_29350 PF00990 Diguanylate cyclase, GGDEF domain DEW08_29350 PF00989 PAS fold DEW08_29350 PF00563 EAL domain DEW08_29350 PF01590 GAF domain DEW08_29355 PF00990 Diguanylate cyclase, GGDEF domain DEW08_29355 PF00563 EAL domain DEW08_29355 PF03707 Bacterial signalling protein N terminal repeat DEW08_29365 PF00459 Inositol monophosphatase family DEW08_29370 PF04305 Protein of unknown function (DUF455) DEW08_29375 PF12802 MarR family DEW08_29405 PF01042 Endoribonuclease L-PSP DEW08_29415 PF00441 Acyl-CoA dehydrogenase, C-terminal domain DEW08_29415 PF02771 Acyl-CoA dehydrogenase, N-terminal domain DEW08_29415 PF02770 Acyl-CoA dehydrogenase, middle domain DEW08_29420 PF00378 Enoyl-CoA hydratase/isomerase DEW08_29425 PF00106 short chain dehydrogenase DEW08_29430 PF01494 FAD binding domain DEW08_29440 PF13193 AMP-binding enzyme C-terminal domain DEW08_29440 PF00501 AMP-binding enzyme DEW08_29445 PF00866 Ring hydroxylating beta subunit DEW08_29450 PF00848 Ring hydroxylating alpha subunit (catalytic domain) DEW08_29450 PF00355 Rieske [2Fe-2S] domain DEW08_29455 PF00175 Oxidoreductase NAD-binding domain DEW08_29455 PF00111 2Fe-2S iron-sulfur cluster binding domain DEW08_29475 PF00271 Helicase conserved C-terminal domain DEW08_29475 PF04434 SWIM zinc finger DEW08_29475 PF00176 SNF2 family N-terminal domain DEW08_29480 PF13657 HipA N-terminal domain DEW08_29480 PF07804 HipA-like C-terminal domain DEW08_29485 PF17757 UvrB interaction domain DEW08_29485 PF12344 Ultra-violet resistance protein B DEW08_29485 PF04851 Type III restriction enzyme, res subunit DEW08_29485 PF00271 Helicase conserved C-terminal domain DEW08_29485 PF02151 UvrB/uvrC motif DEW08_29505 PF11799 impB/mucB/samB family C-terminal domain DEW08_29505 PF00817 impB/mucB/samB family DEW08_29515 PF13193 AMP-binding enzyme C-terminal domain DEW08_29515 PF00501 AMP-binding enzyme DEW08_29520 PF04199 Putative cyclase DEW08_29535 PF00005 ABC transporter DEW08_29560 PF00535 Glycosyl transferase family 2 DEW08_29590 PF01050 Mannose-6-phosphate isomerase DEW08_29590 PF00483 Nucleotidyl transferase DEW08_29595 PF01061 ABC-2 type transporter DEW08_29600 PF00005 ABC transporter DEW08_29605 PF01370 NAD dependent epimerase/dehydratase family DEW08_29610 PF00535 Glycosyl transferase family 2 DEW08_29615 PF03412 Peptidase C39 family DEW08_29615 PF00005 ABC transporter DEW08_29615 PF00664 ABC transporter transmembrane region DEW08_29635 PF00483 Nucleotidyl transferase DEW08_29640 PF04321 RmlD substrate binding domain DEW08_29645 PF16363 GDP-mannose 4,6 dehydratase DEW08_29650 PF00908 dTDP-4-dehydrorhamnose 3,5-epimerase DEW08_29655 PF16363 GDP-mannose 4,6 dehydratase DEW08_29670 PF00534 Glycosyl transferases group 1 DEW08_29680 PF00535 Glycosyl transferase family 2 DEW08_29690 PF01370 NAD dependent epimerase/dehydratase family DEW08_29695 PF00534 Glycosyl transferases group 1 DEW08_29695 PF08323 Starch synthase catalytic domain DEW08_29715 PF00535 Glycosyl transferase family 2 DEW08_29720 PF00005 ABC transporter DEW08_29725 PF01061 ABC-2 type transporter DEW08_29745 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family DEW08_29750 PF02719 Polysaccharide biosynthesis protein DEW08_29765 PF13632 Glycosyl transferase family group 2 DEW08_29780 PF10119 Predicted methyltransferase regulatory domain DEW08_29780 PF13847 Methyltransferase domain DEW08_29785 PF13580 SIS domain DEW08_29800 PF01040 UbiA prenyltransferase family DEW08_29810 PF01565 FAD binding domain DEW08_29810 PF04030 D-arabinono-1,4-lactone oxidase DEW08_29820 PF00106 short chain dehydrogenase DEW08_29830 PF00353 RTX calcium-binding nonapeptide repeat (4 copies) DEW08_29830 PF08548 Peptidase M10 serralysin C terminal DEW08_29835 PF01370 NAD dependent epimerase/dehydratase family DEW08_29840 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family DEW08_29845 PF00364 Biotin-requiring enzyme DEW08_29845 PF02780 Transketolase, C-terminal domain DEW08_29845 PF02779 Transketolase, pyrimidine binding domain DEW08_29850 PF00676 Dehydrogenase E1 component DEW08_29855 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DEW08_29855 PF00072 Response regulator receiver domain DEW08_29855 PF00512 His Kinase A (phospho-acceptor) domain DEW08_29855 PF09456 RcsC Alpha-Beta-Loop (ABL) DEW08_29860 PF00293 NUDIX domain DEW08_29890 PF01467 Cytidylyltransferase-like DEW08_29890 PF00294 pfkB family carbohydrate kinase DEW08_29915 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal DEW08_29915 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III DEW08_29920 PF05433 Glycine zipper 2TM domain DEW08_29920 PF16998 17 kDa outer membrane surface antigen DEW08_29930 PF02348 Cytidylyltransferase DEW08_29935 PF02310 B12 binding domain DEW08_29935 PF04055 Radical SAM superfamily DEW08_29970 PF01695 IstB-like ATP binding protein DEW08_29975 PF00665 Integrase core domain DEW08_29975 PF02796 Helix-turn-helix domain of resolvase DEW08_29995 PF08666 SAF domain DEW08_29995 PF03102 NeuB family DEW08_30000 PF16363 GDP-mannose 4,6 dehydratase DEW08_30005 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family DEW08_30010 PF02350 UDP-N-acetylglucosamine 2-epimerase DEW08_30020 PF00483 Nucleotidyl transferase DEW08_30030 PF02348 Cytidylyltransferase DEW08_30050 PF08666 SAF domain DEW08_30050 PF03102 NeuB family DEW08_30055 PF00977 Histidine biosynthesis protein DEW08_30060 PF00117 Glutamine amidotransferase class-I DEW08_30085 PF00534 Glycosyl transferases group 1 DEW08_30085 PF13439 Glycosyltransferase Family 4 DEW08_30110 PF13614 AAA domain DEW08_30115 PF02195 ParB-like nuclease domain DEW08_30115 PF17762 HTH domain found in ParB protein DEW08_30120 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain DEW08_30120 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain DEW08_30120 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain DEW08_30130 PF09335 SNARE associated Golgi protein DEW08_30135 PF00589 Phage integrase family DEW08_30155 PF01370 NAD dependent epimerase/dehydratase family DEW08_30160 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain DEW08_30160 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain DEW08_30160 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain DEW08_30165 PF00009 Elongation factor Tu GTP binding domain DEW08_30170 PF01507 Phosphoadenosine phosphosulfate reductase family DEW08_30205 PF00535 Glycosyl transferase family 2 DEW08_30215 PF00534 Glycosyl transferases group 1 DEW08_30215 PF08323 Starch synthase catalytic domain DEW08_30225 PF00535 Glycosyl transferase family 2 DEW08_30230 PF16363 GDP-mannose 4,6 dehydratase DEW08_30235 PF16363 GDP-mannose 4,6 dehydratase DEW08_30245 PF00535 Glycosyl transferase family 2 DEW08_30395 PF02195 ParB-like nuclease domain DEW08_30395 PF17762 HTH domain found in ParB protein