locus-tag class description AvCA_00010 PF00308 Bacterial dnaA protein AvCA_00010 PF08299 Bacterial dnaA protein helix-turn-helix AvCA_00010 PF11638 DnaA N-terminal domain AvCA_00020 PF00712 DNA polymerase III beta subunit, N-terminal domain AvCA_00020 PF02767 DNA polymerase III beta subunit, central domain AvCA_00020 PF02768 DNA polymerase III beta subunit, C-terminal domain AvCA_00030 PF02463 RecF/RecN/SMC N terminal domain AvCA_00040 PF00204 DNA gyrase B AvCA_00040 PF01751 Toprim domain AvCA_00040 PF18053 DNA gyrase B subunit insert domain AvCA_00040 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AvCA_00040 PF00986 DNA gyrase B subunit, carboxyl terminus AvCA_00060 PF04261 Dyp-type peroxidase family AvCA_00100 PF02092 Glycyl-tRNA synthetase beta subunit AvCA_00110 PF02091 Glycyl-tRNA synthetase alpha subunit AvCA_00120 PF03352 Methyladenine glycosylase AvCA_00130 PF00565 Staphylococcal nuclease homologue AvCA_00130 PF02872 5'-nucleotidase, C-terminal domain AvCA_00130 PF00746 LPXTG cell wall anchor motif AvCA_00130 PF00149 Calcineurin-like phosphoesterase AvCA_00140 PF02254 TrkA-N domain AvCA_00140 PF02080 TrkA-C domain AvCA_00150 PF01029 NusB family AvCA_00150 PF01189 16S rRNA methyltransferase RsmB/F AvCA_00160 PF02911 Formyl transferase, C-terminal domain AvCA_00160 PF00551 Formyl transferase AvCA_00170 PF01327 Polypeptide deformylase AvCA_00190 PF02481 DNA recombination-mediator protein A AvCA_00190 PF17782 DprA winged helix domain AvCA_00200 PF01300 Telomere recombination AvCA_00210 PF00107 Zinc-binding dehydrogenase AvCA_00210 PF08240 Alcohol dehydrogenase GroES-like domain AvCA_00220 PF01218 Coproporphyrinogen III oxidase AvCA_00230 PF01488 Shikimate / quinate 5-dehydrogenase AvCA_00230 PF18317 Shikimate 5'-dehydrogenase C-terminal domain AvCA_00230 PF08501 Shikimate dehydrogenase substrate binding domain AvCA_00250 PF07732 Multicopper oxidase AvCA_00250 PF07731 Multicopper oxidase AvCA_00250 PF00394 Multicopper oxidase AvCA_00270 PF05275 Copper resistance protein B precursor (CopB) AvCA_00280 PF02308 MgtC family AvCA_00360 PF00034 Cytochrome c AvCA_00370 PF00990 Diguanylate cyclase, GGDEF domain AvCA_00370 PF00072 Response regulator receiver domain AvCA_00380 PF03358 NADPH-dependent FMN reductase AvCA_00390 PF07670 Nucleoside recognition AvCA_00420 PF00990 Diguanylate cyclase, GGDEF domain AvCA_00500 PF00009 Elongation factor Tu GTP binding domain AvCA_00520 PF13361 UvrD-like helicase C-terminal domain AvCA_00520 PF00580 UvrD/REP helicase N-terminal domain AvCA_00530 PF00563 EAL domain AvCA_00530 PF03707 Bacterial signalling protein N terminal repeat AvCA_00530 PF00990 Diguanylate cyclase, GGDEF domain AvCA_00600 PF00005 ABC transporter AvCA_00610 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion AvCA_00620 PF00440 Bacterial regulatory proteins, tetR family AvCA_00620 PF09209 Tetracyclin repressor-like, C-terminal domain AvCA_00630 PF01612 3'-5' exonuclease AvCA_00630 PF00476 DNA polymerase family A AvCA_00630 PF01367 5'-3' exonuclease, C-terminal SAM fold AvCA_00630 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain AvCA_00650 PF01636 Phosphotransferase enzyme family AvCA_00660 PF12697 Alpha/beta hydrolase family AvCA_00720 PF13302 Acetyltransferase (GNAT) domain AvCA_00740 PF00893 Small Multidrug Resistance protein AvCA_00750 PF01385 Probable transposase AvCA_00750 PF07282 Putative transposase DNA-binding domain AvCA_00750 PF12323 Helix-turn-helix domain AvCA_00790 PF00857 Isochorismatase family AvCA_00820 PF01841 Transglutaminase-like superfamily AvCA_00820 PF08379 Bacterial transglutaminase-like N-terminal region AvCA_00830 PF01297 Zinc-uptake complex component A periplasmic AvCA_00840 PF01475 Ferric uptake regulator family AvCA_00850 PF00005 ABC transporter AvCA_00860 PF00950 ABC 3 transport family AvCA_00880 PF08240 Alcohol dehydrogenase GroES-like domain AvCA_00890 PF13618 Gluconate 2-dehydrogenase subunit 3 AvCA_00900 PF00732 GMC oxidoreductase AvCA_00900 PF05199 GMC oxidoreductase AvCA_00910 PF00034 Cytochrome c AvCA_00910 PF13442 Cytochrome C oxidase, cbb3-type, subunit III AvCA_00920 PF03573 outer membrane porin, OprD family AvCA_00930 PF02630 SCO1/SenC AvCA_00940 PF01040 UbiA prenyltransferase family AvCA_00950 PF02628 Cytochrome oxidase assembly protein AvCA_00990 PF00510 Cytochrome c oxidase subunit III AvCA_01000 PF04442 Cytochrome c oxidase assembly protein CtaG/Cox11 AvCA_01010 PF00115 Cytochrome C and Quinol oxidase polypeptide I AvCA_01020 PF02790 Cytochrome C oxidase subunit II, transmembrane domain AvCA_01020 PF00116 Cytochrome C oxidase subunit II, periplasmic domain AvCA_01050 PF00916 Sulfate permease family AvCA_01050 PF01740 STAS domain AvCA_01060 PF00484 Carbonic anhydrase AvCA_01090 PF01432 Peptidase family M3 AvCA_01110 PF16220 Domain of unknown function (DUF4880) AvCA_01110 PF04773 FecR protein AvCA_01120 PF00593 TonB dependent receptor AvCA_01120 PF07715 TonB-dependent Receptor Plug Domain AvCA_01130 PF00132 Bacterial transferase hexapeptide (six repeats) AvCA_01180 PF00710 Asparaginase, N-terminal AvCA_01180 PF17763 Glutaminase/Asparaginase C-terminal domain AvCA_01190 PF00731 AIR carboxylase AvCA_01200 PF17769 Phosphoribosylaminoimidazole carboxylase C-terminal domain AvCA_01200 PF02222 ATP-grasp domain AvCA_01220 PF00768 D-alanyl-D-alanine carboxypeptidase AvCA_01240 PF03573 outer membrane porin, OprD family AvCA_01280 PF00005 ABC transporter AvCA_01280 PF03459 TOBE domain AvCA_01290 PF00528 Binding-protein-dependent transport system inner membrane component AvCA_01330 PF07690 Major Facilitator Superfamily AvCA_01340 PF13193 AMP-binding enzyme C-terminal domain AvCA_01340 PF01553 Acyltransferase AvCA_01340 PF00501 AMP-binding enzyme AvCA_01380 PF00142 4Fe-4S iron sulfur cluster binding proteins, NifH/frxC family AvCA_01390 PF00148 Nitrogenase component 1 type Oxidoreductase AvCA_01400 PF00148 Nitrogenase component 1 type Oxidoreductase AvCA_01400 PF11844 Domain of unknown function (DUF3364) AvCA_01410 PF06988 NifT/FixU protein AvCA_01420 PF02579 Dinitrogenase iron-molybdenum cofactor AvCA_01420 PF16844 Dinitrogenase iron-molybdenum cofactor, N-terminal AvCA_01450 PF00148 Nitrogenase component 1 type Oxidoreductase AvCA_01470 PF00148 Nitrogenase component 1 type Oxidoreductase AvCA_01480 PF02579 Dinitrogenase iron-molybdenum cofactor AvCA_01490 PF03270 Protein of unknown function, DUF269 AvCA_01580 PF03459 TOBE domain AvCA_01580 PF00005 ABC transporter AvCA_01610 PF01521 Iron-sulphur cluster biosynthesis AvCA_01620 PF04324 BFD-like [2Fe-2S] binding domain AvCA_01620 PF01592 NifU-like N terminal domain AvCA_01620 PF01106 NifU-like domain AvCA_01630 PF00266 Aminotransferase class-V AvCA_01640 PF00682 HMGL-like AvCA_01650 PF00132 Bacterial transferase hexapeptide (six repeats) AvCA_01670 PF03206 Nitrogen fixation protein NifW AvCA_01680 PF04319 NifZ domain AvCA_01690 PF00639 PPIC-type PPIASE domain AvCA_01700 PF06689 ClpX C4-type zinc finger AvCA_01700 PF07724 AAA domain (Cdc48 subfamily) AvCA_01700 PF10431 C-terminal, D2-small domain, of ClpB protein AvCA_01710 PF00258 Flavodoxin AvCA_01740 PF07683 Cobalamin synthesis protein cobW C-terminal domain AvCA_01740 PF02492 CobW/HypB/UreG, nucleotide-binding domain AvCA_01760 PF03061 Thioesterase superfamily AvCA_01780 PF02690 Na+/Pi-cotransporter AvCA_01800 PF02566 OsmC-like protein AvCA_01840 PF02233 NAD(P) transhydrogenase beta subunit AvCA_01850 PF12769 4TM region of pyridine nucleotide transhydrogenase, mitoch AvCA_01860 PF01262 Alanine dehydrogenase/PNT, C-terminal domain AvCA_01860 PF05222 Alanine dehydrogenase/PNT, N-terminal domain AvCA_01880 PF00529 HlyD membrane-fusion protein of T1SS AvCA_01880 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion AvCA_01890 PF00873 AcrB/AcrD/AcrF family AvCA_01920 PF09411 Lipid A 3-O-deacylase (PagL) AvCA_01930 PF00753 Metallo-beta-lactamase superfamily AvCA_01950 PF04143 Sulphur transport AvCA_01970 PF01510 N-acetylmuramoyl-L-alanine amidase AvCA_01990 PF01323 DSBA-like thioredoxin domain AvCA_02000 PF00034 Cytochrome c AvCA_02010 PF01926 50S ribosome-binding GTPase AvCA_02020 PF02781 Glucose-6-phosphate dehydrogenase, C-terminal domain AvCA_02020 PF00479 Glucose-6-phosphate dehydrogenase, NAD binding domain AvCA_02030 PF01380 SIS domain AvCA_02030 PF01418 Helix-turn-helix domain, rpiR family AvCA_02040 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AvCA_02040 PF03466 LysR substrate binding domain AvCA_02050 PF02785 Biotin carboxylase C-terminal domain AvCA_02050 PF00289 Biotin carboxylase, N-terminal domain AvCA_02050 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain AvCA_02060 PF02436 Conserved carboxylase domain AvCA_02060 PF00364 Biotin-requiring enzyme AvCA_02060 PF00682 HMGL-like AvCA_02070 PF00296 Luciferase-like monooxygenase AvCA_02110 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AvCA_02110 PF03466 LysR substrate binding domain AvCA_02120 PF00291 Pyridoxal-phosphate dependent enzyme AvCA_02130 PF00290 Tryptophan synthase alpha chain AvCA_02190 PF01556 DnaJ C terminal domain AvCA_02190 PF00226 DnaJ domain AvCA_02210 PF01925 Sulfite exporter TauE/SafE AvCA_02230 PF00593 TonB dependent receptor AvCA_02230 PF07660 Secretin and TonB N terminus short domain AvCA_02230 PF07715 TonB-dependent Receptor Plug Domain AvCA_02250 PF08281 Sigma-70, region 4 AvCA_02250 PF04542 Sigma-70 region 2 AvCA_02310 PF04231 Endonuclease I AvCA_02330 PF05532 CsbD-like AvCA_02350 PF13411 MerR HTH family regulatory protein AvCA_02370 PF00561 alpha/beta hydrolase fold AvCA_02380 PF05170 AsmA family AvCA_02400 PF00881 Nitroreductase family AvCA_02410 PF12704 MacB-like periplasmic core domain AvCA_02410 PF00005 ABC transporter AvCA_02410 PF02687 FtsX-like permease family AvCA_02470 PF00128 Alpha amylase, catalytic domain AvCA_02480 PF00690 Cation transporter/ATPase, N-terminus AvCA_02480 PF00689 Cation transporting ATPase, C-terminus AvCA_02510 PF02223 Thymidylate kinase AvCA_02520 PF04325 Protein of unknown function (DUF465) AvCA_02540 PF00528 Binding-protein-dependent transport system inner membrane component AvCA_02560 PF00005 ABC transporter AvCA_02590 PF00148 Nitrogenase component 1 type Oxidoreductase AvCA_02600 PF03139 Vanadium/alternative nitrogenase delta subunit AvCA_02610 PF00148 Nitrogenase component 1 type Oxidoreductase AvCA_02630 PF09820 Predicted AAA-ATPase AvCA_02630 PF08011 PD-(D/E)XK nuclease superfamily AvCA_02650 PF12838 4Fe-4S dicluster domain AvCA_02660 PF00142 4Fe-4S iron sulfur cluster binding proteins, NifH/frxC family AvCA_02690 PF07690 Major Facilitator Superfamily AvCA_02700 PF00581 Rhodanese-like domain AvCA_02700 PF00899 ThiF family AvCA_02710 PF00899 ThiF family AvCA_02750 PF00148 Nitrogenase component 1 type Oxidoreductase AvCA_02770 PF00148 Nitrogenase component 1 type Oxidoreductase AvCA_02780 PF02954 Bacterial regulatory protein, Fis family AvCA_02780 PF01590 GAF domain AvCA_02780 PF00158 Sigma-54 interaction domain AvCA_02790 PF01106 NifU-like domain AvCA_02800 PF01042 Endoribonuclease L-PSP AvCA_02810 PF02824 TGS domain AvCA_02810 PF13291 ACT domain AvCA_02810 PF04607 Region found in RelA / SpoT proteins AvCA_02820 PF01192 RNA polymerase Rpb6 AvCA_02830 PF00625 Guanylate kinase AvCA_02840 PF08340 Domain of unknown function (DUF1732) AvCA_02840 PF03755 YicC-like family, N-terminal region AvCA_02850 PF01138 3' exoribonuclease family, domain 1 AvCA_02850 PF03725 3' exoribonuclease family, domain 2 AvCA_02870 PF03372 Endonuclease/Exonuclease/phosphatase family AvCA_02880 PF00156 Phosphoribosyl transferase domain AvCA_02900 PF00696 Amino acid kinase family AvCA_02910 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I AvCA_02910 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain AvCA_02910 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II AvCA_02910 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III AvCA_02920 PF00692 dUTPase AvCA_02930 PF04127 DNA / pantothenate metabolism flavoprotein AvCA_02930 PF02441 Flavoprotein AvCA_02940 PF04002 RadC-like JAB domain AvCA_02950 PF00912 Transglycosylase AvCA_02960 PF04241 Protein of unknown function (DUF423) AvCA_02970 PF05690 Thiazole biosynthesis protein ThiG AvCA_02970 PF02597 ThiS family AvCA_02980 PF05690 Thiazole biosynthesis protein ThiG AvCA_02990 PF02390 Putative methyltransferase AvCA_03000 PF06969 HemN C-terminal domain AvCA_03000 PF04055 Radical SAM superfamily AvCA_03010 PF01725 Ham1 family AvCA_03030 PF07021 Methionine biosynthesis protein MetW AvCA_03030 PF00561 alpha/beta hydrolase fold AvCA_03040 PF00561 alpha/beta hydrolase fold AvCA_03050 PF02594 Uncharacterised ACR, YggU family COG1872 AvCA_03060 PF02325 YGGT family AvCA_03070 PF14748 Pyrroline-5-carboxylate reductase dimerisation AvCA_03070 PF03807 NADP oxidoreductase coenzyme F420-dependent AvCA_03080 PF01168 Alanine racemase, N-terminal domain AvCA_03090 PF00437 Type II/IV secretion system protein AvCA_03110 PF01979 Amidohydrolase family AvCA_03120 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain AvCA_03120 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain AvCA_03130 PF00156 Phosphoribosyl transferase domain AvCA_03140 PF03652 Holliday junction resolvase AvCA_03150 PF02622 Uncharacterized ACR, COG1678 AvCA_03170 PF02955 Prokaryotic glutathione synthetase, ATP-grasp domain AvCA_03170 PF02951 Prokaryotic glutathione synthetase, N-terminal domain AvCA_03180 PF00072 Response regulator receiver domain AvCA_03190 PF04452 RNA methyltransferase AvCA_03210 PF00202 Aminotransferase class-III AvCA_03220 PF01593 Flavin containing amine oxidoreductase AvCA_03240 PF01292 Prokaryotic cytochrome b561 AvCA_03250 PF04264 YceI-like domain AvCA_03280 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AvCA_03280 PF00512 His Kinase A (phospho-acceptor) domain AvCA_03310 PF00920 Dehydratase family AvCA_03350 PF10672 S-adenosylmethionine-dependent methyltransferase AvCA_03350 PF17785 PUA-like domain AvCA_03360 PF01061 ABC-2 type transporter AvCA_03370 PF00005 ABC transporter AvCA_03380 PF02203 Tar ligand binding domain homologue AvCA_03380 PF00672 HAMP domain AvCA_03380 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain AvCA_03390 PF01965 DJ-1/PfpI family AvCA_03400 PF01149 Formamidopyrimidine-DNA glycosylase N-terminal domain AvCA_03400 PF06831 Formamidopyrimidine-DNA glycosylase H2TH domain AvCA_03400 PF06827 Zinc finger found in FPG and IleRS AvCA_03430 PF07759 Protein of unknown function (DUF1615) AvCA_03450 PF13183 4Fe-4S dicluster domain AvCA_03450 PF02754 Cysteine-rich domain AvCA_03470 PF00037 4Fe-4S binding domain AvCA_03490 PF01467 Cytidylyltransferase-like AvCA_03500 PF00561 alpha/beta hydrolase fold AvCA_03520 PF05193 Peptidase M16 inactive domain AvCA_03530 PF05193 Peptidase M16 inactive domain AvCA_03530 PF00675 Insulinase (Peptidase family M16) AvCA_03540 PF00270 DEAD/DEAH box helicase AvCA_03540 PF00271 Helicase conserved C-terminal domain AvCA_03550 PF02219 Methylenetetrahydrofolate reductase AvCA_03570 PF00670 S-adenosyl-L-homocysteine hydrolase, NAD binding domain AvCA_03570 PF05221 S-adenosyl-L-homocysteine hydrolase AvCA_03590 PF03120 NAD-dependent DNA ligase OB-fold domain AvCA_03590 PF01653 NAD-dependent DNA ligase adenylation domain AvCA_03600 PF07690 Major Facilitator Superfamily AvCA_03620 PF01488 Shikimate / quinate 5-dehydrogenase AvCA_03620 PF08501 Shikimate dehydrogenase substrate binding domain AvCA_03620 PF18317 Shikimate 5'-dehydrogenase C-terminal domain AvCA_03630 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component AvCA_03640 PF04290 Tripartite ATP-independent periplasmic transporters, DctQ component AvCA_03650 PF03480 Bacterial extracellular solute-binding protein, family 7 AvCA_03680 PF00072 Response regulator receiver domain AvCA_03680 PF00158 Sigma-54 interaction domain AvCA_03680 PF02954 Bacterial regulatory protein, Fis family AvCA_03690 PF00512 His Kinase A (phospho-acceptor) domain AvCA_03690 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AvCA_03690 PF02743 Cache domain AvCA_03700 PF03466 LysR substrate binding domain AvCA_03700 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AvCA_03710 PF00296 Luciferase-like monooxygenase AvCA_03750 PF03401 Tripartite tricarboxylate transporter family receptor AvCA_03760 PF09084 NMT1/THI5 like AvCA_03770 PF07690 Major Facilitator Superfamily AvCA_03780 PF00724 NADH:flavin oxidoreductase / NADH oxidase family AvCA_03790 PF03466 LysR substrate binding domain AvCA_03790 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AvCA_03800 PF02634 FdhD/NarQ family AvCA_03810 PF00384 Molybdopterin oxidoreductase AvCA_03810 PF01568 Molydopterin dinucleotide binding domain AvCA_03810 PF04879 Molybdopterin oxidoreductase Fe4S4 domain AvCA_03820 PF12800 4Fe-4S binding domain AvCA_03820 PF13247 4Fe-4S dicluster domain AvCA_03820 PF09163 Formate dehydrogenase N, transmembrane AvCA_03830 PF01292 Prokaryotic cytochrome b561 AvCA_03840 PF04216 Protein involved in formate dehydrogenase formation AvCA_03850 PF06463 Molybdenum Cofactor Synthesis C AvCA_03850 PF04055 Radical SAM superfamily AvCA_03870 PF04542 Sigma-70 region 2 AvCA_03870 PF08281 Sigma-70, region 4 AvCA_03910 PF11339 Protein of unknown function (DUF3141) AvCA_03980 PF13533 Biotin-lipoyl like AvCA_04000 PF04632 Fusaric acid resistance protein family AvCA_04010 PF02321 Outer membrane efflux protein AvCA_04020 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AvCA_04020 PF03466 LysR substrate binding domain AvCA_04080 PF06039 Malate:quinone oxidoreductase (Mqo) AvCA_04130 PF02685 Glucokinase AvCA_04140 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily AvCA_04150 PF07690 Major Facilitator Superfamily AvCA_04230 PF06296 RelE toxin of RelE / RelB toxin-antitoxin system AvCA_04330 PF04168 A predicted alpha-helical domain with a conserved ER motif. AvCA_04330 PF14403 Circularly permuted ATP-grasp type 2 AvCA_04390 PF01058 NADH ubiquinone oxidoreductase, 20 Kd subunit AvCA_04430 PF00884 Sulfatase AvCA_04440 PF12706 Beta-lactamase superfamily domain AvCA_04450 PF04955 HupE / UreJ protein AvCA_04470 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain AvCA_04490 PF03063 Prismane/CO dehydrogenase family AvCA_04500 PF13247 4Fe-4S dicluster domain AvCA_04520 PF04362 Bacterial Fe(2+) trafficking AvCA_04530 PF14815 NUDIX domain AvCA_04530 PF00730 HhH-GPD superfamily base excision DNA repair protein AvCA_04530 PF00633 Helix-hairpin-helix motif AvCA_04530 PF10576 Iron-sulfur binding domain of endonuclease III AvCA_04570 PF03737 Aldolase/RraA AvCA_04590 PF00475 Imidazoleglycerol-phosphate dehydratase AvCA_04600 PF00117 Glutamine amidotransferase class-I AvCA_04620 PF00977 Histidine biosynthesis protein AvCA_04630 PF00977 Histidine biosynthesis protein AvCA_04640 PF13180 PDZ domain AvCA_04640 PF03572 Peptidase family S41 AvCA_04650 PF01551 Peptidase family M23 AvCA_04670 PF01676 Metalloenzyme superfamily AvCA_04670 PF06415 BPG-independent PGAM N-terminus (iPGM_N) AvCA_04690 PF00462 Glutaredoxin AvCA_04700 PF02556 Preprotein translocase subunit SecB AvCA_04710 PF00588 SpoU rRNA Methylase family AvCA_04720 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AvCA_04720 PF03466 LysR substrate binding domain AvCA_04730 PF00202 Aminotransferase class-III AvCA_04740 PF01679 Proteolipid membrane potential modulator AvCA_04760 PF03886 ABC-type transport auxiliary lipoprotein component AvCA_04760 PF02470 MlaD protein AvCA_04770 PF00005 ABC transporter AvCA_04780 PF02405 Permease MlaE AvCA_04790 PF04337 Protein of unknown function, DUF480 AvCA_04840 PF00437 Type II/IV secretion system protein AvCA_04880 PF01384 Phosphate transporter family AvCA_04910 PF01546 Peptidase family M20/M25/M40 AvCA_04910 PF07687 Peptidase dimerisation domain AvCA_04920 PF00583 Acetyltransferase (GNAT) family AvCA_04920 PF00696 Amino acid kinase family AvCA_04950 PF13426 PAS domain AvCA_04950 PF08447 PAS fold AvCA_04950 PF05231 MASE1 AvCA_04950 PF08448 PAS fold AvCA_04950 PF00563 EAL domain AvCA_04950 PF00990 Diguanylate cyclase, GGDEF domain AvCA_04970 PF02333 Phytase AvCA_04980 PF01618 MotA/TolQ/ExbB proton channel family AvCA_04990 PF02472 Biopolymer transport protein ExbD/TolR AvCA_05020 PF04262 Glutamate-cysteine ligase AvCA_05040 PF16921 Tex protein YqgF-like domain AvCA_05040 PF09371 Tex-like protein N-terminal domain AvCA_05040 PF17674 HHH domain AvCA_05040 PF00575 S1 RNA binding domain AvCA_05060 PF01270 Glycosyl hydrolases family 8 AvCA_05080 PF05420 Cellulose synthase operon protein C C-terminus (BCSC_C) AvCA_05090 PF03170 Bacterial cellulose synthase subunit AvCA_05090 PF03552 Cellulose synthase AvCA_05090 PF07238 PilZ domain AvCA_05090 PF00535 Glycosyl transferase family 2 AvCA_05100 PF06564 Cellulose biosynthesis protein BcsQ AvCA_05120 PF00486 Transcriptional regulatory protein, C terminal AvCA_05120 PF00072 Response regulator receiver domain AvCA_05130 PF00512 His Kinase A (phospho-acceptor) domain AvCA_05130 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AvCA_05130 PF00672 HAMP domain AvCA_05140 PF18030 RimK PreATP-grasp domain AvCA_05140 PF08443 RimK-like ATP-grasp domain AvCA_05150 PF18030 RimK PreATP-grasp domain AvCA_05150 PF08443 RimK-like ATP-grasp domain AvCA_05160 PF01479 S4 domain AvCA_05170 PF03573 outer membrane porin, OprD family AvCA_05180 PF00171 Aldehyde dehydrogenase family AvCA_05190 PF07729 FCD domain AvCA_05190 PF00392 Bacterial regulatory proteins, gntR family AvCA_05220 PF00701 Dihydrodipicolinate synthetase family AvCA_05240 PF07690 Major Facilitator Superfamily AvCA_05250 PF04295 D-galactarate dehydratase / Altronate hydrolase, C terminus AvCA_05250 PF08666 SAF domain AvCA_05260 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain AvCA_05260 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain AvCA_05280 PF04794 YdjC-like protein AvCA_05360 PF13439 Glycosyltransferase Family 4 AvCA_05360 PF00534 Glycosyl transferases group 1 AvCA_05400 PF02397 Bacterial sugar transferase AvCA_05410 PF01370 NAD dependent epimerase/dehydratase family AvCA_05430 PF01430 Hsp33 protein AvCA_05450 PF01293 Phosphoenolpyruvate carboxykinase AvCA_05460 PF13091 PLD-like domain AvCA_05480 PF13419 Haloacid dehalogenase-like hydrolase AvCA_05490 PF00293 NUDIX domain AvCA_05500 PF00459 Inositol monophosphatase family AvCA_05510 PF02801 Beta-ketoacyl synthase, C-terminal domain AvCA_05510 PF00109 Beta-ketoacyl synthase, N-terminal domain AvCA_05530 PF02772 S-adenosylmethionine synthetase, central domain AvCA_05530 PF00438 S-adenosylmethionine synthetase, N-terminal domain AvCA_05530 PF02773 S-adenosylmethionine synthetase, C-terminal domain AvCA_05540 PF13649 Methyltransferase domain AvCA_05570 PF02780 Transketolase, C-terminal domain AvCA_05570 PF00456 Transketolase, thiamine diphosphate binding domain AvCA_05570 PF02779 Transketolase, pyrimidine binding domain AvCA_05580 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain AvCA_05580 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain AvCA_05590 PF00162 Phosphoglycerate kinase AvCA_05600 PF01116 Fructose-bisphosphate aldolase class-II AvCA_05610 PF03928 Haem-degrading AvCA_05620 PF02894 Oxidoreductase family, C-terminal alpha/beta domain AvCA_05620 PF01408 Oxidoreductase family, NAD-binding Rossmann fold AvCA_05630 PF08220 DeoR-like helix-turn-helix domain AvCA_05630 PF00455 DeoR C terminal sensor domain AvCA_05640 PF01863 Protein of unknown function DUF45 AvCA_05660 PF05661 Protein of unknown function (DUF808) AvCA_05670 PF01272 Transcription elongation factor, GreA/GreB, C-term AvCA_05670 PF03449 Transcription elongation factor, N-terminal AvCA_05690 PF12805 FUSC-like inner membrane protein yccS AvCA_05740 PF16200 C-terminal region of band_7 AvCA_05740 PF01145 SPFH domain / Band 7 family AvCA_05750 PF01262 Alanine dehydrogenase/PNT, C-terminal domain AvCA_05750 PF05222 Alanine dehydrogenase/PNT, N-terminal domain AvCA_05760 PF00440 Bacterial regulatory proteins, tetR family AvCA_05770 PF13417 Glutathione S-transferase, N-terminal domain AvCA_05780 PF02798 Glutathione S-transferase, N-terminal domain AvCA_05780 PF00043 Glutathione S-transferase, C-terminal domain AvCA_05790 PF03707 Bacterial signalling protein N terminal repeat AvCA_05790 PF00990 Diguanylate cyclase, GGDEF domain AvCA_05790 PF00563 EAL domain AvCA_05800 PF07690 Major Facilitator Superfamily AvCA_05840 PF07690 Major Facilitator Superfamily AvCA_05860 PF01553 Acyltransferase AvCA_05880 PF00141 Peroxidase AvCA_05890 PF13307 Helicase C-terminal domain AvCA_05890 PF00929 Exonuclease AvCA_05900 PF01385 Probable transposase AvCA_05900 PF12323 Helix-turn-helix domain AvCA_05900 PF07282 Putative transposase DNA-binding domain AvCA_05920 PF01274 Malate synthase AvCA_05940 PF13098 Thioredoxin-like domain AvCA_05950 PF00892 EamA-like transporter family AvCA_05960 PF01636 Phosphotransferase enzyme family AvCA_05970 PF00156 Phosphoribosyl transferase domain AvCA_05980 PF04055 Radical SAM superfamily AvCA_05980 PF06968 Biotin and Thiamin Synthesis associated domain AvCA_05990 PF00155 Aminotransferase class I and II AvCA_06000 PF12697 Alpha/beta hydrolase family AvCA_06000 PF08241 Methyltransferase domain AvCA_06010 PF08241 Methyltransferase domain AvCA_06020 PF01066 CDP-alcohol phosphatidyltransferase AvCA_06050 PF02237 Biotin protein ligase C terminal domain AvCA_06050 PF03099 Biotin/lipoate A/B protein ligase family AvCA_06050 PF08279 HTH domain AvCA_06060 PF03309 Type III pantothenate kinase AvCA_06090 PF03144 Elongation factor Tu domain 2 AvCA_06090 PF03143 Elongation factor Tu C-terminal domain AvCA_06090 PF00009 Elongation factor Tu GTP binding domain AvCA_06100 PF00584 SecE/Sec61-gamma subunits of protein translocation complex AvCA_06110 PF02357 Transcription termination factor nusG AvCA_06110 PF00467 KOW motif AvCA_06120 PF00298 Ribosomal protein L11, RNA binding domain AvCA_06120 PF03946 Ribosomal protein L11, N-terminal domain AvCA_06130 PF00687 Ribosomal protein L1p/L10e family AvCA_06150 PF00466 Ribosomal protein L10 AvCA_06160 PF00542 Ribosomal protein L7/L12 C-terminal domain AvCA_06160 PF16320 Ribosomal protein L7/L12 dimerisation domain AvCA_06170 PF04560 RNA polymerase Rpb2, domain 7 AvCA_06170 PF00562 RNA polymerase Rpb2, domain 6 AvCA_06170 PF10385 RNA polymerase beta subunit external 1 domain AvCA_06170 PF04561 RNA polymerase Rpb2, domain 2 AvCA_06170 PF04565 RNA polymerase Rpb2, domain 3 AvCA_06170 PF04563 RNA polymerase beta subunit AvCA_06180 PF04997 RNA polymerase Rpb1, domain 1 AvCA_06180 PF00623 RNA polymerase Rpb1, domain 2 AvCA_06180 PF04983 RNA polymerase Rpb1, domain 3 AvCA_06180 PF05000 RNA polymerase Rpb1, domain 4 AvCA_06180 PF04998 RNA polymerase Rpb1, domain 5 AvCA_06190 PF00164 Ribosomal protein S12/S23 AvCA_06200 PF00177 Ribosomal protein S7p/S5e AvCA_06220 PF00679 Elongation factor G C-terminus AvCA_06220 PF14492 Elongation Factor G, domain II AvCA_06220 PF03764 Elongation factor G, domain IV AvCA_06220 PF00009 Elongation factor Tu GTP binding domain AvCA_06220 PF03144 Elongation factor Tu domain 2 AvCA_06230 PF03144 Elongation factor Tu domain 2 AvCA_06230 PF03143 Elongation factor Tu C-terminal domain AvCA_06230 PF00009 Elongation factor Tu GTP binding domain AvCA_06240 PF00338 Ribosomal protein S10p/S20e AvCA_06250 PF00297 Ribosomal protein L3 AvCA_06260 PF00573 Ribosomal protein L4/L1 family AvCA_06270 PF00276 Ribosomal protein L23 AvCA_06280 PF03947 Ribosomal Proteins L2, C-terminal domain AvCA_06280 PF00181 Ribosomal Proteins L2, RNA binding domain AvCA_06290 PF00203 Ribosomal protein S19 AvCA_06300 PF00237 Ribosomal protein L22p/L17e AvCA_06310 PF00189 Ribosomal protein S3, C-terminal domain AvCA_06310 PF07650 KH domain AvCA_06320 PF00252 Ribosomal protein L16p/L10e AvCA_06330 PF00831 Ribosomal L29 protein AvCA_06340 PF00366 Ribosomal protein S17 AvCA_06350 PF00238 Ribosomal protein L14p/L23e AvCA_06360 PF00467 KOW motif AvCA_06360 PF17136 Ribosomal proteins 50S L24/mitochondrial 39S L24 AvCA_06370 PF00673 ribosomal L5P family C-terminus AvCA_06370 PF00281 Ribosomal protein L5 AvCA_06380 PF00253 Ribosomal protein S14p/S29e AvCA_06390 PF00410 Ribosomal protein S8 AvCA_06400 PF00347 Ribosomal protein L6 AvCA_06410 PF00861 Ribosomal L18 of archaea, bacteria, mitoch. and chloroplast AvCA_06420 PF03719 Ribosomal protein S5, C-terminal domain AvCA_06420 PF00333 Ribosomal protein S5, N-terminal domain AvCA_06430 PF00327 Ribosomal protein L30p/L7e AvCA_06440 PF00828 Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27A AvCA_06450 PF00344 SecY translocase AvCA_06460 PF00444 Ribosomal protein L36 AvCA_06470 PF00416 Ribosomal protein S13/S18 AvCA_06480 PF00411 Ribosomal protein S11 AvCA_06490 PF00163 Ribosomal protein S4/S9 N-terminal domain AvCA_06490 PF01479 S4 domain AvCA_06500 PF03118 Bacterial RNA polymerase, alpha chain C terminal domain AvCA_06500 PF01000 RNA polymerase Rpb3/RpoA insert domain AvCA_06500 PF01193 RNA polymerase Rpb3/Rpb11 dimerisation domain AvCA_06510 PF01196 Ribosomal protein L17 AvCA_06520 PF17755 UvrA DNA-binding domain AvCA_06520 PF17760 UvrA interaction domain AvCA_06530 PF07690 Major Facilitator Superfamily AvCA_06540 PF00436 Single-strand binding protein family AvCA_06550 PF03466 LysR substrate binding domain AvCA_06550 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AvCA_06580 PF16363 GDP-mannose 4,6 dehydratase AvCA_06590 PF03922 OmpW family AvCA_06610 PF03922 OmpW family AvCA_06640 PF00005 ABC transporter AvCA_06670 PF00085 Thioredoxin AvCA_06700 PF03477 ATP cone domain AvCA_06710 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region AvCA_06710 PF01872 RibD C-terminal domain AvCA_06730 PF00677 Lumazine binding domain AvCA_06740 PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase AvCA_06740 PF00925 GTP cyclohydrolase II AvCA_06750 PF00885 6,7-dimethyl-8-ribityllumazine synthase AvCA_06760 PF01029 NusB family AvCA_06770 PF00586 AIR synthase related protein, N-terminal domain AvCA_06770 PF02769 AIR synthase related protein, C-terminal domain AvCA_06780 PF04608 Phosphatidylglycerophosphatase A AvCA_06800 PF00925 GTP cyclohydrolase II AvCA_06810 PF01497 Periplasmic binding protein AvCA_06840 PF00561 alpha/beta hydrolase fold AvCA_06860 PF00012 Hsp70 protein AvCA_06870 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) AvCA_06870 PF00072 Response regulator receiver domain AvCA_06870 PF00672 HAMP domain AvCA_06870 PF01627 Hpt domain AvCA_06870 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AvCA_06870 PF00512 His Kinase A (phospho-acceptor) domain AvCA_06880 PF01071 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain AvCA_06880 PF02844 Phosphoribosylglycinamide synthetase, N domain AvCA_06880 PF02843 Phosphoribosylglycinamide synthetase, C domain AvCA_06890 PF02142 MGS-like domain AvCA_06890 PF01808 AICARFT/IMPCHase bienzyme AvCA_06900 PF02954 Bacterial regulatory protein, Fis family AvCA_06910 PF01207 Dihydrouridine synthase (Dus) AvCA_06950 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain AvCA_06950 PF00289 Biotin carboxylase, N-terminal domain AvCA_06950 PF02785 Biotin carboxylase C-terminal domain AvCA_06960 PF00364 Biotin-requiring enzyme AvCA_06970 PF01220 Dehydroquinase class II AvCA_06980 PF02683 Cytochrome C biogenesis protein transmembrane region AvCA_06980 PF11412 Disulphide bond corrector protein DsbC AvCA_07000 PF00293 NUDIX domain AvCA_07010 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain AvCA_07010 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain AvCA_07040 PF01253 Translation initiation factor SUI1 AvCA_07050 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain AvCA_07050 PF17810 Arginine decarboxylase helical bundle domain AvCA_07050 PF17944 Arginine decarboxylase C-terminal helical extension AvCA_07070 PF01554 MatE AvCA_07090 PF00582 Universal stress protein family AvCA_07120 PF00230 Major intrinsic protein AvCA_07280 PF17763 Glutaminase/Asparaginase C-terminal domain AvCA_07280 PF00710 Asparaginase, N-terminal AvCA_07290 PF00005 ABC transporter AvCA_07300 PF00528 Binding-protein-dependent transport system inner membrane component AvCA_07310 PF00528 Binding-protein-dependent transport system inner membrane component AvCA_07320 PF00497 Bacterial extracellular solute-binding proteins, family 3 AvCA_07340 PF01794 Ferric reductase like transmembrane component AvCA_07350 PF00174 Oxidoreductase molybdopterin binding domain AvCA_07360 PF00106 short chain dehydrogenase AvCA_07370 PF02803 Thiolase, C-terminal domain AvCA_07370 PF00108 Thiolase, N-terminal domain AvCA_07420 PF08240 Alcohol dehydrogenase GroES-like domain AvCA_07420 PF00107 Zinc-binding dehydrogenase AvCA_07440 PF02666 Phosphatidylserine decarboxylase AvCA_07450 PF00581 Rhodanese-like domain AvCA_07460 PF03193 RsgA GTPase AvCA_07470 PF00929 Exonuclease AvCA_07480 PF08331 Domain of unknown function (DUF1730) AvCA_07490 PF01256 Carbohydrate kinase AvCA_07490 PF03853 YjeF-related protein N-terminus AvCA_07500 PF02367 Threonylcarbamoyl adenosine biosynthesis protein TsaE AvCA_07510 PF11741 AMIN domain AvCA_07510 PF01520 N-acetylmuramoyl-L-alanine amidase AvCA_07520 PF01119 DNA mismatch repair protein, C-terminal domain AvCA_07520 PF08676 MutL C terminal dimerisation domain AvCA_07540 PF17209 Hfq protein AvCA_07550 PF13167 GTP-binding GTPase N-terminal AvCA_07550 PF16360 GTP-binding GTPase Middle Region AvCA_07550 PF01926 50S ribosome-binding GTPase AvCA_07560 PF01145 SPFH domain / Band 7 family AvCA_07570 PF01145 SPFH domain / Band 7 family AvCA_07590 PF13393 Histidyl-tRNA synthetase AvCA_07600 PF00709 Adenylosuccinate synthetase AvCA_07620 PF00773 RNB domain AvCA_07620 PF00575 S1 RNA binding domain AvCA_07620 PF17876 Cold shock domain AvCA_07620 PF08206 Ribonuclease B OB domain AvCA_07620 PF08461 Ribonuclease R winged-helix domain AvCA_07630 PF08032 RNA 2'-O ribose methyltransferase substrate binding AvCA_07630 PF00588 SpoU rRNA Methylase family AvCA_07640 PF01250 Ribosomal protein S6 AvCA_07650 PF01084 Ribosomal protein S18 AvCA_07670 PF01281 Ribosomal protein L9, N-terminal domain AvCA_07670 PF03948 Ribosomal protein L9, C-terminal domain AvCA_07680 PF03796 DnaB-like helicase C terminal domain AvCA_07680 PF00772 DnaB-like helicase N terminal domain AvCA_07690 PF07690 Major Facilitator Superfamily AvCA_07700 PF08497 Radical SAM N-terminal AvCA_07700 PF04055 Radical SAM superfamily AvCA_07700 PF11842 Domain of unknown function (DUF3362) AvCA_07730 PF05175 Methyltransferase small domain AvCA_07740 PF00175 Oxidoreductase NAD-binding domain AvCA_07740 PF00970 Oxidoreductase FAD-binding domain AvCA_07760 PF13419 Haloacid dehalogenase-like hydrolase AvCA_07770 PF04228 Putative neutral zinc metallopeptidase AvCA_07800 PF05958 tRNA (Uracil-5-)-methyltransferase AvCA_07810 PF00860 Permease family AvCA_07860 PF07715 TonB-dependent Receptor Plug Domain AvCA_07860 PF00593 TonB dependent receptor AvCA_07870 PF13292 1-deoxy-D-xylulose-5-phosphate synthase AvCA_07870 PF02779 Transketolase, pyrimidine binding domain AvCA_07870 PF02780 Transketolase, C-terminal domain AvCA_07880 PF00348 Polyprenyl synthetase AvCA_07890 PF02609 Exonuclease VII small subunit AvCA_07910 PF00563 EAL domain AvCA_07910 PF03707 Bacterial signalling protein N terminal repeat AvCA_07910 PF00990 Diguanylate cyclase, GGDEF domain AvCA_07910 PF13188 PAS domain AvCA_07940 PF00719 Inorganic pyrophosphatase AvCA_07950 PF06167 Glucose-regulated metallo-peptidase M90 AvCA_07960 PF00107 Zinc-binding dehydrogenase AvCA_07960 PF08240 Alcohol dehydrogenase GroES-like domain AvCA_07980 PF00465 Iron-containing alcohol dehydrogenase AvCA_08000 PF00171 Aldehyde dehydrogenase family AvCA_08020 PF00158 Sigma-54 interaction domain AvCA_08020 PF02954 Bacterial regulatory protein, Fis family AvCA_08020 PF01590 GAF domain AvCA_08030 PF01225 Mur ligase family, catalytic domain AvCA_08030 PF08245 Mur ligase middle domain AvCA_08030 PF02875 Mur ligase family, glutamate ligase domain AvCA_08040 PF02441 Flavoprotein AvCA_08060 PF02472 Biopolymer transport protein ExbD/TolR AvCA_08070 PF01618 MotA/TolQ/ExbB proton channel family AvCA_08080 PF03544 Gram-negative bacterial TonB protein C-terminal AvCA_08090 PF00005 ABC transporter AvCA_08100 PF00528 Binding-protein-dependent transport system inner membrane component AvCA_08130 PF09084 NMT1/THI5 like AvCA_08140 PF03466 LysR substrate binding domain AvCA_08140 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AvCA_08150 PF00593 TonB dependent receptor AvCA_08150 PF07715 TonB-dependent Receptor Plug Domain AvCA_08160 PF02668 Taurine catabolism dioxygenase TauD, TfdA family AvCA_08170 PF09084 NMT1/THI5 like AvCA_08180 PF03466 LysR substrate binding domain AvCA_08180 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AvCA_08200 PF00593 TonB dependent receptor AvCA_08200 PF07715 TonB-dependent Receptor Plug Domain AvCA_08230 PF17425 Arylsulfotransferase Ig-like domain AvCA_08230 PF05935 Arylsulfotransferase (ASST) AvCA_08240 PF07694 5TMR of 5TMR-LYT AvCA_08240 PF00990 Diguanylate cyclase, GGDEF domain AvCA_08270 PF17862 AAA+ lid domain AvCA_08270 PF00004 ATPase family associated with various cellular activities (AAA) AvCA_08270 PF01434 Peptidase family M41 AvCA_08270 PF06480 FtsH Extracellular AvCA_08290 PF13460 NAD(P)H-binding AvCA_08300 PF03788 LrgA family AvCA_08310 PF04172 LrgB-like family AvCA_08340 PF09335 SNARE associated Golgi protein AvCA_08350 PF00171 Aldehyde dehydrogenase family AvCA_08360 PF01467 Cytidylyltransferase-like AvCA_08380 PF02590 Predicted SPOUT methyltransferase AvCA_08390 PF00905 Penicillin binding protein transpeptidase domain AvCA_08390 PF03717 Penicillin-binding Protein dimerisation domain AvCA_08400 PF01098 Cell cycle protein AvCA_08410 PF13406 Transglycosylase SLT domain AvCA_08420 PF05036 Sporulation related domain AvCA_08420 PF03330 Lytic transglycolase AvCA_08430 PF00768 D-alanyl-D-alanine carboxypeptidase AvCA_08430 PF07943 Penicillin-binding protein 5, C-terminal domain AvCA_08440 PF04359 Protein of unknown function (DUF493) AvCA_08450 PF03099 Biotin/lipoate A/B protein ligase family AvCA_08460 PF16881 N-terminal domain of lipoyl synthase of Radical_SAM family AvCA_08460 PF04055 Radical SAM superfamily AvCA_08480 PF00205 Thiamine pyrophosphate enzyme, central domain AvCA_08480 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain AvCA_08480 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain AvCA_08490 PF13406 Transglycosylase SLT domain AvCA_08530 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion AvCA_08540 PF00873 AcrB/AcrD/AcrF family AvCA_08550 PF03466 LysR substrate binding domain AvCA_08550 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AvCA_08570 PF12833 Helix-turn-helix domain AvCA_08570 PF14525 AraC-binding-like domain AvCA_08590 PF00848 Ring hydroxylating alpha subunit (catalytic domain) AvCA_08590 PF00355 Rieske [2Fe-2S] domain AvCA_08600 PF00866 Ring hydroxylating beta subunit AvCA_08610 PF00175 Oxidoreductase NAD-binding domain AvCA_08610 PF00111 2Fe-2S iron-sulfur cluster binding domain AvCA_08610 PF00970 Oxidoreductase FAD-binding domain AvCA_08620 PF00106 short chain dehydrogenase AvCA_08630 PF07690 Major Facilitator Superfamily AvCA_08660 PF03573 outer membrane porin, OprD family AvCA_08670 PF01557 Fumarylacetoacetate (FAA) hydrolase family AvCA_08690 PF01361 Tautomerase enzyme AvCA_08700 PF09290 Prokaryotic acetaldehyde dehydrogenase, dimerisation AvCA_08700 PF01118 Semialdehyde dehydrogenase, NAD binding domain AvCA_08710 PF00111 2Fe-2S iron-sulfur cluster binding domain AvCA_08720 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily AvCA_08730 PF00171 Aldehyde dehydrogenase family AvCA_08740 PF00682 HMGL-like AvCA_08740 PF07836 DmpG-like communication domain AvCA_08760 PF03466 LysR substrate binding domain AvCA_08760 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AvCA_08790 PF01361 Tautomerase enzyme AvCA_08800 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily AvCA_08810 PF00175 Oxidoreductase NAD-binding domain AvCA_08810 PF00970 Oxidoreductase FAD-binding domain AvCA_08810 PF00111 2Fe-2S iron-sulfur cluster binding domain AvCA_08820 PF04663 Phenol hydroxylase conserved region AvCA_08830 PF02332 Methane/Phenol/Toluene Hydroxylase AvCA_08830 PF04945 YHS domain AvCA_08840 PF02406 MmoB/DmpM family AvCA_08850 PF02332 Methane/Phenol/Toluene Hydroxylase AvCA_08860 PF06099 Phenol hydroxylase subunit AvCA_08880 PF02830 V4R domain AvCA_08880 PF06505 Activator of aromatic catabolism AvCA_08880 PF00158 Sigma-54 interaction domain AvCA_08880 PF02954 Bacterial regulatory protein, Fis family AvCA_09000 PF09334 tRNA synthetases class I (M) AvCA_09000 PF13603 Leucyl-tRNA synthetase, Domain 2 AvCA_09000 PF00133 tRNA synthetases class I (I, L, M and V) AvCA_09000 PF08264 Anticodon-binding domain of tRNA AvCA_09020 PF02698 DUF218 domain AvCA_09030 PF00795 Carbon-nitrogen hydrolase AvCA_09040 PF03471 Transporter associated domain AvCA_09040 PF00571 CBS domain AvCA_09050 PF02130 Uncharacterized protein family UPF0054 AvCA_09060 PF02562 PhoH-like protein AvCA_09080 PF04055 Radical SAM superfamily AvCA_09080 PF01938 TRAM domain AvCA_09080 PF00919 Uncharacterized protein family UPF0004 AvCA_09100 PF00665 Integrase core domain AvCA_09120 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AvCA_09120 PF03466 LysR substrate binding domain AvCA_09140 PF05336 L-rhamnose mutarotase AvCA_09150 PF06379 L-rhamnose-proton symport protein (RhaT) AvCA_09190 PF02264 LamB porin AvCA_09210 PF07690 Major Facilitator Superfamily AvCA_09220 PF13378 Enolase C-terminal domain-like AvCA_09220 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain AvCA_09230 PF03328 HpcH/HpaI aldolase/citrate lyase family AvCA_09240 PF00171 Aldehyde dehydrogenase family AvCA_09260 PF00202 Aminotransferase class-III AvCA_09270 PF02581 Thiamine monophosphate synthase AvCA_09280 PF08543 Phosphomethylpyrimidine kinase AvCA_09290 PF00441 Acyl-CoA dehydrogenase, C-terminal domain AvCA_09290 PF18158 Adaptive response protein AidB N-terminal domain AvCA_09290 PF02770 Acyl-CoA dehydrogenase, middle domain AvCA_09300 PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain AvCA_09300 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain AvCA_09310 PF04183 IucA / IucC family AvCA_09310 PF06276 Ferric iron reductase FhuF-like transporter AvCA_09320 PF07690 Major Facilitator Superfamily AvCA_09330 PF04183 IucA / IucC family AvCA_09330 PF06276 Ferric iron reductase FhuF-like transporter AvCA_09350 PF00593 TonB dependent receptor AvCA_09350 PF07660 Secretin and TonB N terminus short domain AvCA_09350 PF07715 TonB-dependent Receptor Plug Domain AvCA_09360 PF03328 HpcH/HpaI aldolase/citrate lyase family AvCA_09370 PF10423 Bacterial AMP nucleoside phosphorylase N-terminus AvCA_09370 PF01048 Phosphorylase superfamily AvCA_09380 PF02492 CobW/HypB/UreG, nucleotide-binding domain AvCA_09390 PF01730 UreF AvCA_09400 PF02814 UreE urease accessory protein, N-terminal domain AvCA_09400 PF05194 UreE urease accessory protein, C-terminal domain AvCA_09420 PF02894 Oxidoreductase family, C-terminal alpha/beta domain AvCA_09420 PF01408 Oxidoreductase family, NAD-binding Rossmann fold AvCA_09460 PF00375 Sodium:dicarboxylate symporter family AvCA_09470 PF00561 alpha/beta hydrolase fold AvCA_09480 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AvCA_09480 PF03466 LysR substrate binding domain AvCA_09530 PF02796 Helix-turn-helix domain of resolvase AvCA_09530 PF00665 Integrase core domain AvCA_09540 PF01695 IstB-like ATP binding protein AvCA_09560 PF01548 Transposase AvCA_09560 PF02371 Transposase IS116/IS110/IS902 family AvCA_09570 PF13340 Putative transposase of IS4/5 family (DUF4096) AvCA_09640 PF00005 ABC transporter AvCA_09640 PF00664 ABC transporter transmembrane region AvCA_09680 PF00501 AMP-binding enzyme AvCA_09680 PF00668 Condensation domain AvCA_09680 PF00550 Phosphopantetheine attachment site AvCA_09680 PF13193 AMP-binding enzyme C-terminal domain AvCA_09690 PF00550 Phosphopantetheine attachment site AvCA_09690 PF00501 AMP-binding enzyme AvCA_09690 PF00975 Thioesterase domain AvCA_09690 PF00668 Condensation domain AvCA_09690 PF13193 AMP-binding enzyme C-terminal domain AvCA_09720 PF00664 ABC transporter transmembrane region AvCA_09720 PF00005 ABC transporter AvCA_09724 PF02600 Disulfide bond formation protein DsbB AvCA_09750 PF13333 Integrase core domain AvCA_09750 PF13276 HTH-like domain AvCA_09750 PF00665 Integrase core domain AvCA_09760 PF02371 Transposase IS116/IS110/IS902 family AvCA_09760 PF01548 Transposase AvCA_09770 PF01527 Transposase AvCA_09800 PF00694 Aconitase C-terminal domain AvCA_09810 PF00330 Aconitase family (aconitate hydratase) AvCA_09850 PF05099 Tellurite resistance protein TerB AvCA_09880 PF00449 Urease alpha-subunit, N-terminal domain AvCA_09880 PF01979 Amidohydrolase family AvCA_09890 PF00699 Urease beta subunit AvCA_09900 PF00547 Urease, gamma subunit AvCA_09910 PF01774 UreD urease accessory protein AvCA_09920 PF06751 Ethanolamine ammonia lyase large subunit (EutB) AvCA_09930 PF05985 Ethanolamine ammonia-lyase light chain (EutC) AvCA_09940 PF00849 RNA pseudouridylate synthase AvCA_09960 PF13404 AsnC-type helix-turn-helix domain AvCA_09960 PF01037 Lrp/AsnC ligand binding domain AvCA_09970 PF01545 Cation efflux family AvCA_09970 PF16916 Dimerisation domain of Zinc Transporter AvCA_09990 PF04408 Helicase associated domain (HA2) AvCA_09990 PF08482 ATP-dependent helicase C-terminal AvCA_09990 PF00271 Helicase conserved C-terminal domain AvCA_09990 PF00270 DEAD/DEAH box helicase AvCA_10000 PF00106 short chain dehydrogenase AvCA_10010 PF00270 DEAD/DEAH box helicase AvCA_10010 PF00271 Helicase conserved C-terminal domain AvCA_10020 PF07992 Pyridine nucleotide-disulphide oxidoreductase AvCA_10020 PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster AvCA_10020 PF13247 4Fe-4S dicluster domain AvCA_10030 PF00850 Histone deacetylase domain AvCA_10050 PF00210 Ferritin-like domain AvCA_10060 PF00376 MerR family regulatory protein AvCA_10060 PF09278 MerR, DNA binding AvCA_10080 PF00440 Bacterial regulatory proteins, tetR family AvCA_10080 PF08361 MAATS-type transcriptional repressor, C-terminal region AvCA_10090 PF07690 Major Facilitator Superfamily AvCA_10160 PF01594 AI-2E family transporter AvCA_10170 PF01734 Patatin-like phospholipase AvCA_10180 PF02769 AIR synthase related protein, C-terminal domain AvCA_10180 PF00586 AIR synthase related protein, N-terminal domain AvCA_10200 PF13439 Glycosyltransferase Family 4 AvCA_10200 PF00534 Glycosyl transferases group 1 AvCA_10230 PF03150 Di-haem cytochrome c peroxidase AvCA_10230 PF14376 Haem-binding domain AvCA_10230 PF00034 Cytochrome c AvCA_10260 PF02152 Dihydroneopterin aldolase AvCA_10280 PF16957 Malonate decarboxylase, alpha subunit, transporter AvCA_10290 PF01874 ATP:dephospho-CoA triphosphoribosyl transferase AvCA_10300 PF06857 Malonate decarboxylase delta subunit (MdcD) AvCA_10310 PF01039 Carboxyl transferase domain AvCA_10330 PF10620 Phosphoribosyl-dephospho-CoA transferase MdcG AvCA_10340 PF00698 Acyl transferase domain AvCA_10390 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AvCA_10390 PF03466 LysR substrate binding domain AvCA_10410 PF00884 Sulfatase AvCA_10430 PF06965 Na+/H+ antiporter 1 AvCA_10440 PF07715 TonB-dependent Receptor Plug Domain AvCA_10490 PF00999 Sodium/hydrogen exchanger family AvCA_10490 PF02254 TrkA-N domain AvCA_10510 PF00037 4Fe-4S binding domain AvCA_10520 PF01012 Electron transfer flavoprotein domain AvCA_10530 PF00766 Electron transfer flavoprotein FAD-binding domain AvCA_10530 PF01012 Electron transfer flavoprotein domain AvCA_10540 PF07992 Pyridine nucleotide-disulphide oxidoreductase AvCA_10570 PF03741 Integral membrane protein TerC family AvCA_10580 PF00072 Response regulator receiver domain AvCA_10580 PF00486 Transcriptional regulatory protein, C terminal AvCA_10590 PF00512 His Kinase A (phospho-acceptor) domain AvCA_10590 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AvCA_10590 PF13493 Domain of unknown function (DUF4118) AvCA_10590 PF02702 Osmosensitive K+ channel His kinase sensor domain AvCA_10590 PF13492 GAF domain AvCA_10600 PF01384 Phosphate transporter family AvCA_10610 PF03544 Gram-negative bacterial TonB protein C-terminal AvCA_10620 PF02472 Biopolymer transport protein ExbD/TolR AvCA_10630 PF01618 MotA/TolQ/ExbB proton channel family AvCA_10640 PF03573 outer membrane porin, OprD family AvCA_10660 PF16177 Acetyl-coenzyme A synthetase N-terminus AvCA_10660 PF13193 AMP-binding enzyme C-terminal domain AvCA_10660 PF00501 AMP-binding enzyme AvCA_10670 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AvCA_10670 PF03466 LysR substrate binding domain AvCA_10680 PF00441 Acyl-CoA dehydrogenase, C-terminal domain AvCA_10680 PF02771 Acyl-CoA dehydrogenase, N-terminal domain AvCA_10680 PF02770 Acyl-CoA dehydrogenase, middle domain AvCA_10690 PF00378 Enoyl-CoA hydratase/isomerase AvCA_10700 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase AvCA_10700 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase AvCA_10710 PF00378 Enoyl-CoA hydratase/isomerase AvCA_10720 PF00171 Aldehyde dehydrogenase family AvCA_10730 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AvCA_10730 PF03466 LysR substrate binding domain AvCA_10740 PF00445 Ribonuclease T2 family AvCA_10750 PF13369 Transglutaminase-like superfamily AvCA_10760 PF02812 Glu/Leu/Phe/Val dehydrogenase, dimerisation domain AvCA_10760 PF00208 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase AvCA_10770 PF00676 Dehydrogenase E1 component AvCA_10780 PF02780 Transketolase, C-terminal domain AvCA_10780 PF02779 Transketolase, pyrimidine binding domain AvCA_10790 PF00364 Biotin-requiring enzyme AvCA_10790 PF02817 e3 binding domain AvCA_10790 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) AvCA_10810 PF06146 Phosphate-starvation-inducible E AvCA_10820 PF00271 Helicase conserved C-terminal domain AvCA_10820 PF00176 SNF2 family N-terminal domain AvCA_10820 PF12419 SNF2 Helicase protein AvCA_10830 PF13340 Putative transposase of IS4/5 family (DUF4096) AvCA_10860 PF01050 Mannose-6-phosphate isomerase AvCA_10860 PF00483 Nucleotidyl transferase AvCA_10870 PF11182 Alginate O-acetyl transferase AlgF AvCA_10880 PF16822 SGNH hydrolase-like domain, acetyltransferase AlgX AvCA_10890 PF03062 MBOAT, membrane-bound O-acyltransferase family AvCA_10900 PF05426 Alginate lyase AvCA_10910 PF16822 SGNH hydrolase-like domain, acetyltransferase AlgX AvCA_10910 PF16824 C-terminal carbohydrate-binding module AvCA_10920 PF13229 Right handed beta helix region AvCA_10930 PF13372 Alginate export AvCA_10950 PF07238 PilZ domain AvCA_10970 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain AvCA_10970 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain AvCA_10970 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain AvCA_10980 PF07043 Protein of unknown function (DUF1328) AvCA_11040 PF02322 Cytochrome bd terminal oxidase subunit II AvCA_11050 PF01654 Cytochrome bd terminal oxidase subunit I AvCA_11070 PF04239 Protein of unknown function (DUF421) AvCA_11100 PF05974 Domain of unknown function (DUF892) AvCA_11120 PF00072 Response regulator receiver domain AvCA_11120 PF00158 Sigma-54 interaction domain AvCA_11120 PF02954 Bacterial regulatory protein, Fis family AvCA_11180 PF00115 Cytochrome C and Quinol oxidase polypeptide I AvCA_11210 PF01979 Amidohydrolase family AvCA_11210 PF13382 Adenine deaminase C-terminal domain AvCA_11220 PF03883 Peroxide stress protein YaaA AvCA_11230 PF16916 Dimerisation domain of Zinc Transporter AvCA_11230 PF01545 Cation efflux family AvCA_11240 PF13638 PIN domain AvCA_11240 PF02562 PhoH-like protein AvCA_11260 PF01967 MoaC family AvCA_11270 PF02597 ThiS family AvCA_11280 PF02391 MoaE protein AvCA_11290 PF00271 Helicase conserved C-terminal domain AvCA_11290 PF00270 DEAD/DEAH box helicase AvCA_11300 PF02230 Phospholipase/Carboxylesterase AvCA_11320 PF00665 Integrase core domain AvCA_11340 PF03573 outer membrane porin, OprD family AvCA_11350 PF01541 GIY-YIG catalytic domain AvCA_11390 PF05378 Hydantoinase/oxoprolinase N-terminal region AvCA_11390 PF01968 Hydantoinase/oxoprolinase AvCA_11400 PF08882 Acetone carboxylase gamma subunit AvCA_11410 PF01968 Hydantoinase/oxoprolinase AvCA_11410 PF05378 Hydantoinase/oxoprolinase N-terminal region AvCA_11420 PF02954 Bacterial regulatory protein, Fis family AvCA_11420 PF13426 PAS domain AvCA_11420 PF00158 Sigma-54 interaction domain AvCA_11430 PF02492 CobW/HypB/UreG, nucleotide-binding domain AvCA_11430 PF07683 Cobalamin synthesis protein cobW C-terminal domain AvCA_11450 PF04245 37-kD nucleoid-associated bacterial protein AvCA_11460 PF13419 Haloacid dehalogenase-like hydrolase AvCA_11490 PF03466 LysR substrate binding domain AvCA_11490 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AvCA_11510 PF00106 short chain dehydrogenase AvCA_11540 PF00149 Calcineurin-like phosphoesterase AvCA_11540 PF12320 Type 5 capsule protein repressor C-terminal domain AvCA_11550 PF13476 AAA domain AvCA_11570 PF03471 Transporter associated domain AvCA_11570 PF03741 Integral membrane protein TerC family AvCA_11570 PF00571 CBS domain AvCA_11590 PF05971 RNA methyltransferase AvCA_11600 PF00563 EAL domain AvCA_11600 PF03707 Bacterial signalling protein N terminal repeat AvCA_11600 PF00990 Diguanylate cyclase, GGDEF domain AvCA_11620 PF10458 Valyl tRNA synthetase tRNA binding arm AvCA_11620 PF00133 tRNA synthetases class I (I, L, M and V) AvCA_11620 PF08264 Anticodon-binding domain of tRNA AvCA_11640 PF04364 DNA polymerase III chi subunit, HolC AvCA_11650 PF00883 Cytosol aminopeptidase family, catalytic domain AvCA_11650 PF02789 Cytosol aminopeptidase family, N-terminal domain AvCA_11670 PF03739 Lipopolysaccharide export system permease LptF/LptG AvCA_11680 PF03739 Lipopolysaccharide export system permease LptF/LptG AvCA_11700 PF00313 'Cold-shock' DNA-binding domain AvCA_11760 PF03023 Lipid II flippase MurJ AvCA_11770 PF01687 Riboflavin kinase AvCA_11770 PF06574 FAD synthetase AvCA_11780 PF06827 Zinc finger found in FPG and IleRS AvCA_11780 PF08264 Anticodon-binding domain of tRNA AvCA_11780 PF00133 tRNA synthetases class I (I, L, M and V) AvCA_11790 PF01252 Signal peptidase (SPase) II AvCA_11800 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase AvCA_11810 PF02401 LytB protein AvCA_11880 PF01266 FAD dependent oxidoreductase AvCA_11920 PF02540 NAD synthase AvCA_11920 PF00795 Carbon-nitrogen hydrolase AvCA_11930 PF13525 Outer membrane lipoprotein AvCA_11940 PF01479 S4 domain AvCA_11940 PF00849 RNA pseudouridylate synthase AvCA_11960 PF10431 C-terminal, D2-small domain, of ClpB protein AvCA_11960 PF00004 ATPase family associated with various cellular activities (AAA) AvCA_11960 PF17871 AAA lid domain AvCA_11960 PF07724 AAA domain (Cdc48 subfamily) AvCA_11960 PF02861 Clp amino terminal domain, pathogenicity island component AvCA_11970 PF00005 ABC transporter AvCA_11970 PF00664 ABC transporter transmembrane region AvCA_12000 PF07992 Pyridine nucleotide-disulphide oxidoreductase AvCA_12060 PF01121 Dephospho-CoA kinase AvCA_12070 PF06750 Bacterial Peptidase A24 N-terminal domain AvCA_12070 PF01478 Type IV leader peptidase family AvCA_12080 PF00482 Type II secretion system (T2SS), protein F AvCA_12090 PF05157 Type II secretion system (T2SS), protein E, N-terminal domain AvCA_12090 PF00437 Type II/IV secretion system protein AvCA_12104 PF00114 Pilin (bacterial filament) AvCA_12104 PF07963 Prokaryotic N-terminal methylation motif AvCA_12110 PF02749 Quinolinate phosphoribosyl transferase, N-terminal domain AvCA_12110 PF01729 Quinolinate phosphoribosyl transferase, C-terminal domain AvCA_12120 PF01510 N-acetylmuramoyl-L-alanine amidase AvCA_12130 PF03186 CobD/Cbib protein AvCA_12130 PF17113 Regulatory signalling modulator protein AmpE AvCA_12140 PF01026 TatD related DNase AvCA_12150 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain AvCA_12150 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain AvCA_12150 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain AvCA_12180 PF00356 Bacterial regulatory proteins, lacI family AvCA_12180 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family AvCA_12190 PF05524 PEP-utilising enzyme, N-terminal AvCA_12190 PF00391 PEP-utilising enzyme, mobile domain AvCA_12190 PF02896 PEP-utilising enzyme, TIM barrel domain AvCA_12190 PF00381 PTS HPr component phosphorylation site AvCA_12190 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 AvCA_12200 PF00294 pfkB family carbohydrate kinase AvCA_12210 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit AvCA_12210 PF02378 Phosphotransferase system, EIIC AvCA_12250 PF00009 Elongation factor Tu GTP binding domain AvCA_12250 PF03144 Elongation factor Tu domain 2 AvCA_12250 PF16658 Class II release factor RF3, C-terminal domain AvCA_12270 PF08479 POTRA domain, ShlB-type AvCA_12270 PF03865 Haemolysin secretion/activation protein ShlB/FhaC/HecB AvCA_12290 PF12833 Helix-turn-helix domain AvCA_12290 PF12852 Cupin AvCA_12320 PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain AvCA_12320 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain AvCA_12330 PF07715 TonB-dependent Receptor Plug Domain AvCA_12330 PF00593 TonB dependent receptor AvCA_12340 PF18331 PKHD-type hydroxylase C-terminal domain AvCA_12340 PF13640 2OG-Fe(II) oxygenase superfamily AvCA_12350 PF01070 FMN-dependent dehydrogenase AvCA_12370 PF00667 FAD binding domain AvCA_12370 PF00258 Flavodoxin AvCA_12370 PF00175 Oxidoreductase NAD-binding domain AvCA_12420 PF13640 2OG-Fe(II) oxygenase superfamily AvCA_12420 PF18331 PKHD-type hydroxylase C-terminal domain AvCA_12430 PF07715 TonB-dependent Receptor Plug Domain AvCA_12430 PF00593 TonB dependent receptor AvCA_12440 PF00175 Oxidoreductase NAD-binding domain AvCA_12440 PF00667 FAD binding domain AvCA_12440 PF00258 Flavodoxin AvCA_12450 PF03746 LamB/YcsF family AvCA_12460 PF02682 Carboxyltransferase domain, subdomain C and D AvCA_12470 PF02626 Carboxyltransferase domain, subdomain A and B AvCA_12480 PF00005 ABC transporter AvCA_12480 PF08352 Oligopeptide/dipeptide transporter, C-terminal region AvCA_12490 PF08352 Oligopeptide/dipeptide transporter, C-terminal region AvCA_12490 PF00005 ABC transporter AvCA_12500 PF12911 N-terminal TM domain of oligopeptide transport permease C AvCA_12500 PF00528 Binding-protein-dependent transport system inner membrane component AvCA_12510 PF00528 Binding-protein-dependent transport system inner membrane component AvCA_12520 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle AvCA_12550 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AvCA_12550 PF00512 His Kinase A (phospho-acceptor) domain AvCA_12560 PF02954 Bacterial regulatory protein, Fis family AvCA_12560 PF00072 Response regulator receiver domain AvCA_12590 PF01699 Sodium/calcium exchanger protein AvCA_12600 PF03330 Lytic transglycolase AvCA_12610 PF02637 GatB domain AvCA_12610 PF02934 GatB/GatE catalytic domain AvCA_12630 PF01425 Amidase AvCA_12640 PF02686 Glu-tRNAGln amidotransferase C subunit AvCA_12660 PF04085 rod shape-determining protein MreC AvCA_12670 PF04093 rod shape-determining protein MreD AvCA_12680 PF02545 Maf-like protein AvCA_12690 PF10150 Ribonuclease E/G family AvCA_12690 PF00575 S1 RNA binding domain AvCA_12710 PF00795 Carbon-nitrogen hydrolase AvCA_12730 PF04751 Protein of unknown function (DUF615) AvCA_12740 PF01523 Putative modulator of DNA gyrase AvCA_12750 PF00381 PTS HPr component phosphorylation site AvCA_12760 PF03668 P-loop ATPase protein family AvCA_12770 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 AvCA_12780 PF02482 Sigma 54 modulation protein / S30EA ribosomal protein AvCA_12790 PF00309 Sigma-54 factor, Activator interacting domain (AID) AvCA_12790 PF04552 Sigma-54, DNA binding domain AvCA_12790 PF04963 Sigma-54 factor, core binding domain AvCA_12800 PF12399 Branched-chain amino acid ATP-binding cassette transporter AvCA_12800 PF00005 ABC transporter AvCA_12810 PF03968 OstA-like protein AvCA_12840 PF01380 SIS domain AvCA_12840 PF00571 CBS domain AvCA_12850 PF00005 ABC transporter AvCA_12860 PF02405 Permease MlaE AvCA_12870 PF02470 MlaD protein AvCA_12880 PF05494 MlaC protein AvCA_12900 PF01722 BolA-like protein AvCA_12910 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) AvCA_12920 PF01634 ATP phosphoribosyltransferase AvCA_12930 PF00815 Histidinol dehydrogenase AvCA_12940 PF00155 Aminotransferase class I and II AvCA_12950 PF13180 PDZ domain AvCA_12960 PF01784 NIF3 (NGG1p interacting factor 3) AvCA_12970 PF01507 Phosphoadenosine phosphosulfate reductase family AvCA_12980 PF00009 Elongation factor Tu GTP binding domain AvCA_13010 PF00579 tRNA synthetases class I (W and Y) AvCA_13020 PF03969 AFG1-like ATPase AvCA_13030 PF04493 Endonuclease V AvCA_13040 PF00572 Ribosomal protein L13 AvCA_13050 PF00380 Ribosomal protein S9/S16 AvCA_13060 PF00355 Rieske [2Fe-2S] domain AvCA_13060 PF10399 Ubiquitinol-cytochrome C reductase Fe-S subunit TAT signal AvCA_13070 PF00032 Cytochrome b(C-terminal)/b6/petD AvCA_13070 PF00033 Cytochrome b/b6/petB AvCA_13080 PF02167 Cytochrome C1 family AvCA_13090 PF00043 Glutathione S-transferase, C-terminal domain AvCA_13090 PF02798 Glutathione S-transferase, N-terminal domain AvCA_13100 PF04386 Stringent starvation protein B AvCA_13110 PF04972 BON domain AvCA_13120 PF13580 SIS domain AvCA_13130 PF02021 Uncharacterised protein family UPF0102 AvCA_13140 PF04348 LppC putative lipoprotein AvCA_13150 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases AvCA_13160 PF02381 MraZ protein, putative antitoxin-like AvCA_13170 PF01795 MraW methylase family AvCA_13180 PF04999 Cell division protein FtsL AvCA_13190 PF00905 Penicillin binding protein transpeptidase domain AvCA_13190 PF03717 Penicillin-binding Protein dimerisation domain AvCA_13200 PF08245 Mur ligase middle domain AvCA_13200 PF02875 Mur ligase family, glutamate ligase domain AvCA_13200 PF01225 Mur ligase family, catalytic domain AvCA_13210 PF01225 Mur ligase family, catalytic domain AvCA_13210 PF08245 Mur ligase middle domain AvCA_13210 PF02875 Mur ligase family, glutamate ligase domain AvCA_13220 PF10555 Phospho-N-acetylmuramoyl-pentapeptide-transferase signature 1 AvCA_13220 PF00953 Glycosyl transferase family 4 AvCA_13230 PF08245 Mur ligase middle domain AvCA_13230 PF02875 Mur ligase family, glutamate ligase domain AvCA_13240 PF01098 Cell cycle protein AvCA_13250 PF03033 Glycosyltransferase family 28 N-terminal domain AvCA_13250 PF04101 Glycosyltransferase family 28 C-terminal domain AvCA_13260 PF01225 Mur ligase family, catalytic domain AvCA_13260 PF02875 Mur ligase family, glutamate ligase domain AvCA_13260 PF08245 Mur ligase middle domain AvCA_13270 PF01820 D-ala D-ala ligase N-terminus AvCA_13270 PF07478 D-ala D-ala ligase C-terminus AvCA_13280 PF03799 Cell division protein FtsQ AvCA_13280 PF08478 POTRA domain, FtsQ-type AvCA_13290 PF02491 SHS2 domain inserted in FTSA AvCA_13300 PF00091 Tubulin/FtsZ family, GTPase domain AvCA_13300 PF12327 FtsZ family, C-terminal domain AvCA_13320 PF03331 UDP-3-O-acyl N-acetylglycosamine deacetylase AvCA_13340 PF02810 SEC-C motif AvCA_13340 PF07517 SecA DEAD-like domain AvCA_13340 PF01043 SecA preprotein cross-linking domain AvCA_13340 PF07516 SecA Wing and Scaffold domain AvCA_13350 PF01960 ArgJ family AvCA_13370 PF00293 NUDIX domain AvCA_13380 PF01923 Cobalamin adenosyltransferase AvCA_13390 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AvCA_13390 PF08448 PAS fold AvCA_13390 PF13188 PAS domain AvCA_13390 PF00072 Response regulator receiver domain AvCA_13390 PF00512 His Kinase A (phospho-acceptor) domain AvCA_13400 PF02558 Ketopantoate reductase PanE/ApbA AvCA_13400 PF08546 Ketopantoate reductase PanE/ApbA C terminal AvCA_13410 PF04461 Protein of unknown function (DUF520) AvCA_13420 PF07690 Major Facilitator Superfamily AvCA_13440 PF01243 Pyridoxamine 5'-phosphate oxidase AvCA_13450 PF04186 FxsA cytoplasmic membrane protein AvCA_13470 PF00166 Chaperonin 10 Kd subunit AvCA_13480 PF00118 TCP-1/cpn60 chaperonin family AvCA_13490 PF00078 Reverse transcriptase (RNA-dependent DNA polymerase) AvCA_13490 PF01348 Type II intron maturase AvCA_13500 PF01479 S4 domain AvCA_13500 PF00849 RNA pseudouridylate synthase AvCA_13550 PF00378 Enoyl-CoA hydratase/isomerase AvCA_13560 PF01548 Transposase AvCA_13560 PF02371 Transposase IS116/IS110/IS902 family AvCA_13610 PF03167 Uracil DNA glycosylase superfamily AvCA_13620 PF01571 Aminomethyltransferase folate-binding domain AvCA_13630 PF03937 Flavinator of succinate dehydrogenase AvCA_13650 PF02910 Fumarate reductase flavoprotein C-term AvCA_13650 PF00890 FAD binding domain AvCA_13700 PF03873 Anti sigma-E protein RseA, C-terminal domain AvCA_13700 PF03872 Anti sigma-E protein RseA, N-terminal domain AvCA_13710 PF03888 MucB/RseB N-terminal domain AvCA_13710 PF17188 MucB/RseB C-terminal domain AvCA_13730 PF13180 PDZ domain AvCA_13740 PF06421 GTP-binding protein LepA C-terminus AvCA_13740 PF03144 Elongation factor Tu domain 2 AvCA_13740 PF00009 Elongation factor Tu GTP binding domain AvCA_13740 PF00679 Elongation factor G C-terminus AvCA_13750 PF10502 Signal peptidase, peptidase S26 AvCA_13780 PF14622 Ribonuclease-III-like AvCA_13780 PF00035 Double-stranded RNA binding motif AvCA_13790 PF07650 KH domain AvCA_13790 PF01926 50S ribosome-binding GTPase AvCA_13810 PF08787 Alginate lyase AvCA_13820 PF11967 Recombination protein O N terminal AvCA_13820 PF02565 Recombination protein O C terminal AvCA_13830 PF03740 Pyridoxal phosphate biosynthesis protein PdxJ AvCA_13850 PF08003 Protein of unknown function (DUF1698) AvCA_13860 PF13649 Methyltransferase domain AvCA_13880 PF01614 Bacterial transcriptional regulator AvCA_13880 PF09339 IclR helix-turn-helix domain AvCA_13890 PF00171 Aldehyde dehydrogenase family AvCA_13900 PF00465 Iron-containing alcohol dehydrogenase AvCA_13920 PF00004 ATPase family associated with various cellular activities (AAA) AvCA_13920 PF05362 Lon protease (S16) C-terminal proteolytic domain AvCA_13920 PF02190 ATP-dependent protease La (LON) substrate-binding domain AvCA_13940 PF00593 TonB dependent receptor AvCA_13940 PF07715 TonB-dependent Receptor Plug Domain AvCA_13950 PF01619 Proline dehydrogenase AvCA_13950 PF14850 DNA-binding domain of Proline dehydrogenase AvCA_13950 PF18327 Proline utilization A proline dehydrogenase N-terminal domain AvCA_13950 PF00171 Aldehyde dehydrogenase family AvCA_13970 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AvCA_13970 PF03466 LysR substrate binding domain AvCA_13980 PF08267 Cobalamin-independent synthase, N-terminal domain AvCA_13980 PF01717 Cobalamin-independent synthase, Catalytic domain AvCA_13990 PF00561 alpha/beta hydrolase fold AvCA_14010 PF04073 Aminoacyl-tRNA editing domain AvCA_14020 PF00005 ABC transporter AvCA_14020 PF08402 TOBE domain AvCA_14030 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain AvCA_14030 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain AvCA_14040 PF00462 Glutaredoxin AvCA_14050 PF00210 Ferritin-like domain AvCA_14060 PF00929 Exonuclease AvCA_14070 PF01979 Amidohydrolase family AvCA_14080 PF00764 Arginosuccinate synthase AvCA_14110 PF12804 MobA-like NTP transferase domain AvCA_14120 PF00994 Probable molybdopterin binding domain AvCA_14130 PF03454 MoeA C-terminal region (domain IV) AvCA_14130 PF00994 Probable molybdopterin binding domain AvCA_14130 PF03453 MoeA N-terminal region (domain I and II) AvCA_14140 PF00781 Diacylglycerol kinase catalytic domain AvCA_14150 PF14718 Soluble lytic murein transglycosylase L domain AvCA_14150 PF01464 Transglycosylase SLT domain AvCA_14170 PF00582 Universal stress protein family AvCA_14190 PF07690 Major Facilitator Superfamily AvCA_14210 PF03573 outer membrane porin, OprD family AvCA_14230 PF00378 Enoyl-CoA hydratase/isomerase AvCA_14240 PF00171 Aldehyde dehydrogenase family AvCA_14250 PF00501 AMP-binding enzyme AvCA_14250 PF07993 Male sterility protein AvCA_14250 PF00550 Phosphopantetheine attachment site AvCA_14260 PF00108 Thiolase, N-terminal domain AvCA_14260 PF02803 Thiolase, C-terminal domain AvCA_14270 PF02771 Acyl-CoA dehydrogenase, N-terminal domain AvCA_14270 PF00441 Acyl-CoA dehydrogenase, C-terminal domain AvCA_14270 PF12806 Acetyl-CoA dehydrogenase C-terminal like AvCA_14270 PF02770 Acyl-CoA dehydrogenase, middle domain AvCA_14280 PF01012 Electron transfer flavoprotein domain AvCA_14290 PF00766 Electron transfer flavoprotein FAD-binding domain AvCA_14290 PF01012 Electron transfer flavoprotein domain AvCA_14310 PF00072 Response regulator receiver domain AvCA_14310 PF00486 Transcriptional regulatory protein, C terminal AvCA_14320 PF00512 His Kinase A (phospho-acceptor) domain AvCA_14320 PF00672 HAMP domain AvCA_14320 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AvCA_14330 PF13533 Biotin-lipoyl like AvCA_14340 PF00873 AcrB/AcrD/AcrF family AvCA_14350 PF00873 AcrB/AcrD/AcrF family AvCA_14360 PF02321 Outer membrane efflux protein AvCA_14390 PF01494 FAD binding domain AvCA_14440 PF00378 Enoyl-CoA hydratase/isomerase AvCA_14440 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain AvCA_14440 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain AvCA_14450 PF00108 Thiolase, N-terminal domain AvCA_14450 PF02803 Thiolase, C-terminal domain AvCA_14470 PF01396 Topoisomerase DNA binding C4 zinc finger AvCA_14470 PF01751 Toprim domain AvCA_14470 PF01131 DNA topoisomerase AvCA_14470 PF08272 Topoisomerase I zinc-ribbon-like AvCA_14500 PF03846 Cell division inhibitor SulA AvCA_14510 PF01726 LexA DNA binding domain AvCA_14510 PF00717 Peptidase S24-like AvCA_14520 PF00440 Bacterial regulatory proteins, tetR family AvCA_14540 PF00933 Glycosyl hydrolase family 3 N terminal domain AvCA_14550 PF01048 Phosphorylase superfamily AvCA_14570 PF00270 DEAD/DEAH box helicase AvCA_14570 PF17757 UvrB interaction domain AvCA_14570 PF02559 CarD-like/TRCF domain AvCA_14570 PF00271 Helicase conserved C-terminal domain AvCA_14570 PF03461 TRCF domain AvCA_14580 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain AvCA_14580 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain AvCA_14590 PF11973 NQRA C-terminal domain AvCA_14590 PF05896 Na(+)-translocating NADH-quinone reductase subunit A (NQRA) AvCA_14600 PF03116 NQR2, RnfD, RnfE family AvCA_14610 PF04205 FMN-binding domain AvCA_14620 PF02508 Rnf-Nqr subunit, membrane protein AvCA_14630 PF02508 Rnf-Nqr subunit, membrane protein AvCA_14640 PF00111 2Fe-2S iron-sulfur cluster binding domain AvCA_14640 PF00175 Oxidoreductase NAD-binding domain AvCA_14640 PF00970 Oxidoreductase FAD-binding domain AvCA_14650 PF02424 ApbE family AvCA_14670 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain AvCA_14670 PF07992 Pyridine nucleotide-disulphide oxidoreductase AvCA_14680 PF03009 Glycerophosphoryl diester phosphodiesterase family AvCA_14690 PF12704 MacB-like periplasmic core domain AvCA_14690 PF02687 FtsX-like permease family AvCA_14700 PF00005 ABC transporter AvCA_14710 PF12704 MacB-like periplasmic core domain AvCA_14710 PF02687 FtsX-like permease family AvCA_14730 PF13567 Domain of unknown function (DUF4131) AvCA_14730 PF03772 Competence protein AvCA_14730 PF00753 Metallo-beta-lactamase superfamily AvCA_14740 PF01618 MotA/TolQ/ExbB proton channel family AvCA_14750 PF02472 Biopolymer transport protein ExbD/TolR AvCA_14760 PF02606 Tetraacyldisaccharide-1-P 4'-kinase AvCA_14770 PF03966 Trm112p-like protein AvCA_14780 PF02348 Cytidylyltransferase AvCA_14790 PF01451 Low molecular weight phosphotyrosine protein phosphatase AvCA_14800 PF02873 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain AvCA_14800 PF01565 FAD binding domain AvCA_14810 PF00575 S1 RNA binding domain AvCA_14810 PF10150 Ribonuclease E/G family AvCA_14810 PF12111 Polyribonucleotide phosphorylase C terminal AvCA_14830 PF01479 S4 domain AvCA_14830 PF00849 RNA pseudouridylate synthase AvCA_14840 PF13419 Haloacid dehalogenase-like hydrolase AvCA_14850 PF01343 Peptidase family S49 AvCA_14850 PF06965 Na+/H+ antiporter 1 AvCA_14860 PF02545 Maf-like protein AvCA_14880 PF02620 Large ribosomal RNA subunit accumulation protein YceD AvCA_14890 PF01783 Ribosomal L32p protein family AvCA_14900 PF02504 Fatty acid synthesis protein AvCA_14910 PF00698 Acyl transferase domain AvCA_14930 PF00550 Phosphopantetheine attachment site AvCA_14940 PF02801 Beta-ketoacyl synthase, C-terminal domain AvCA_14940 PF00109 Beta-ketoacyl synthase, N-terminal domain AvCA_14950 PF01063 Amino-transferase class IV AvCA_14960 PF02618 YceG-like family AvCA_14970 PF02223 Thymidylate kinase AvCA_14980 PF09115 DNA polymerase III, delta subunit, C terminal AvCA_15000 PF01026 TatD related DNase AvCA_15020 PF13340 Putative transposase of IS4/5 family (DUF4096) AvCA_15030 PF00266 Aminotransferase class-V AvCA_15050 PF02900 Catalytic LigB subunit of aromatic ring-opening dioxygenase AvCA_15060 PF02771 Acyl-CoA dehydrogenase, N-terminal domain AvCA_15060 PF08028 Acyl-CoA dehydrogenase, C-terminal domain AvCA_15070 PF01613 Flavin reductase like domain AvCA_15080 PF00561 alpha/beta hydrolase fold AvCA_15090 PF01614 Bacterial transcriptional regulator AvCA_15090 PF09339 IclR helix-turn-helix domain AvCA_15110 PF01557 Fumarylacetoacetate (FAA) hydrolase family AvCA_15120 PF09290 Prokaryotic acetaldehyde dehydrogenase, dimerisation AvCA_15120 PF01118 Semialdehyde dehydrogenase, NAD binding domain AvCA_15130 PF07836 DmpG-like communication domain AvCA_15130 PF00682 HMGL-like AvCA_15140 PF07690 Major Facilitator Superfamily AvCA_15150 PF03573 outer membrane porin, OprD family AvCA_15180 PF01012 Electron transfer flavoprotein domain AvCA_15190 PF00766 Electron transfer flavoprotein FAD-binding domain AvCA_15190 PF01012 Electron transfer flavoprotein domain AvCA_15220 PF05736 OprF membrane domain AvCA_15220 PF00691 OmpA family AvCA_15250 PF00215 Orotidine 5'-phosphate decarboxylase / HUMPS family AvCA_15280 PF01132 Elongation factor P (EF-P) OB domain AvCA_15280 PF08207 Elongation factor P (EF-P) KOW-like domain AvCA_15280 PF09285 Elongation factor P, C-terminal AvCA_15290 PF02566 OsmC-like protein AvCA_15300 PF01047 MarR family AvCA_15310 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AvCA_15310 PF03466 LysR substrate binding domain AvCA_15320 PF01925 Sulfite exporter TauE/SafE AvCA_15350 PF04209 homogentisate 1,2-dioxygenase AvCA_15370 PF00270 DEAD/DEAH box helicase AvCA_15370 PF03880 DbpA RNA binding domain AvCA_15370 PF00271 Helicase conserved C-terminal domain AvCA_15380 PF05724 Thiopurine S-methyltransferase (TPMT) AvCA_15400 PF01435 Peptidase family M48 AvCA_15420 PF00155 Aminotransferase class I and II AvCA_15440 PF01641 SelR domain AvCA_15450 PF00255 Glutathione peroxidase AvCA_15460 PF01627 Hpt domain AvCA_15460 PF00072 Response regulator receiver domain AvCA_15460 PF00512 His Kinase A (phospho-acceptor) domain AvCA_15460 PF00672 HAMP domain AvCA_15460 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AvCA_15460 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) AvCA_15490 PF09317 Domain of unknown function (DUF1974) AvCA_15490 PF02771 Acyl-CoA dehydrogenase, N-terminal domain AvCA_15490 PF00441 Acyl-CoA dehydrogenase, C-terminal domain AvCA_15490 PF02770 Acyl-CoA dehydrogenase, middle domain AvCA_15500 PF00005 ABC transporter AvCA_15510 PF01061 ABC-2 type transporter AvCA_15520 PF00672 HAMP domain AvCA_15520 PF00512 His Kinase A (phospho-acceptor) domain AvCA_15520 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AvCA_15530 PF00072 Response regulator receiver domain AvCA_15530 PF00486 Transcriptional regulatory protein, C terminal AvCA_15540 PF14489 QueF-like protein AvCA_15540 PF14819 Nitrile reductase, 7-cyano-7-deazaguanine-reductase N-term AvCA_15550 PF02386 Cation transport protein AvCA_15570 PF03692 Putative zinc- or iron-chelating domain AvCA_15580 PF00881 Nitroreductase family AvCA_15590 PF00512 His Kinase A (phospho-acceptor) domain AvCA_15590 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AvCA_15590 PF08521 Two-component sensor kinase N-terminal AvCA_15610 PF00486 Transcriptional regulatory protein, C terminal AvCA_15610 PF00072 Response regulator receiver domain AvCA_15620 PF03795 YCII-related domain AvCA_15630 PF04279 Intracellular septation protein A AvCA_15640 PF02811 PHP domain AvCA_15650 PF01300 Telomere recombination AvCA_15660 PF02616 Segregation and condensation protein ScpA AvCA_15670 PF04079 Segregation and condensation complex subunit ScpB AvCA_15680 PF00920 Dehydratase family AvCA_15690 PF02685 Glucokinase AvCA_15700 PF01380 SIS domain AvCA_15700 PF01418 Helix-turn-helix domain, rpiR family AvCA_15710 PF01182 Glucosamine-6-phosphate isomerases/6-phosphogluconolactonase AvCA_15720 PF01081 KDPG and KHG aldolase AvCA_15730 PF01479 S4 domain AvCA_15730 PF00849 RNA pseudouridylate synthase AvCA_15740 PF00106 short chain dehydrogenase AvCA_15750 PF13419 Haloacid dehalogenase-like hydrolase AvCA_15770 PF01979 Amidohydrolase family AvCA_15780 PF01385 Probable transposase AvCA_15780 PF12323 Helix-turn-helix domain AvCA_15780 PF07282 Putative transposase DNA-binding domain AvCA_15790 PF00665 Integrase core domain AvCA_15800 PF01008 Initiation factor 2 subunit family AvCA_15810 PF00521 DNA gyrase/topoisomerase IV, subunit A AvCA_15810 PF03989 DNA gyrase C-terminal domain, beta-propeller AvCA_15820 PF00266 Aminotransferase class-V AvCA_15830 PF01842 ACT domain AvCA_15830 PF00800 Prephenate dehydratase AvCA_15830 PF01817 Chorismate mutase type II AvCA_15840 PF00155 Aminotransferase class I and II AvCA_15850 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) AvCA_15860 PF02224 Cytidylate kinase AvCA_15870 PF00575 S1 RNA binding domain AvCA_15880 PF00216 Bacterial DNA-binding protein AvCA_15900 PF07521 Zn-dependent metallo-hydrolase RNA specificity domain AvCA_15900 PF00753 Metallo-beta-lactamase superfamily AvCA_15900 PF10996 Beta-Casp domain AvCA_15920 PF16363 GDP-mannose 4,6 dehydratase AvCA_15930 PF04321 RmlD substrate binding domain AvCA_15940 PF00483 Nucleotidyl transferase AvCA_15950 PF00908 dTDP-4-dehydrorhamnose 3,5-epimerase AvCA_15960 PF01061 ABC-2 type transporter AvCA_15970 PF00005 ABC transporter AvCA_15980 PF00535 Glycosyl transferase family 2 AvCA_16070 PF00263 Bacterial type II and III secretion system protein AvCA_16070 PF03958 Bacterial type II/III secretion system short domain AvCA_16140 PF07963 Prokaryotic N-terminal methylation motif AvCA_16140 PF00114 Pilin (bacterial filament) AvCA_16150 PF08334 Type II secretion system (T2SS), protein G AvCA_16150 PF07963 Prokaryotic N-terminal methylation motif AvCA_16160 PF00482 Type II secretion system (T2SS), protein F AvCA_16170 PF00437 Type II/IV secretion system protein AvCA_16170 PF05157 Type II secretion system (T2SS), protein E, N-terminal domain AvCA_16230 PF02397 Bacterial sugar transferase AvCA_16240 PF00664 ABC transporter transmembrane region AvCA_16240 PF00005 ABC transporter AvCA_16250 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion AvCA_16250 PF00529 HlyD membrane-fusion protein of T1SS AvCA_16260 PF02321 Outer membrane efflux protein AvCA_16270 PF04408 Helicase associated domain (HA2) AvCA_16270 PF11898 Domain of unknown function (DUF3418) AvCA_16270 PF00270 DEAD/DEAH box helicase AvCA_16270 PF00271 Helicase conserved C-terminal domain AvCA_16270 PF07717 Oligonucleotide/oligosaccharide-binding (OB)-fold AvCA_16280 PF02604 Antitoxin Phd_YefM, type II toxin-antitoxin system AvCA_16290 PF06769 YoeB-like toxin of bacterial type II toxin-antitoxin system AvCA_16360 PF07690 Major Facilitator Superfamily AvCA_16380 PF02803 Thiolase, C-terminal domain AvCA_16380 PF00108 Thiolase, N-terminal domain AvCA_16390 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain AvCA_16390 PF00378 Enoyl-CoA hydratase/isomerase AvCA_16390 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain AvCA_16400 PF00441 Acyl-CoA dehydrogenase, C-terminal domain AvCA_16400 PF12806 Acetyl-CoA dehydrogenase C-terminal like AvCA_16400 PF02770 Acyl-CoA dehydrogenase, middle domain AvCA_16400 PF02771 Acyl-CoA dehydrogenase, N-terminal domain AvCA_16410 PF01012 Electron transfer flavoprotein domain AvCA_16420 PF00766 Electron transfer flavoprotein FAD-binding domain AvCA_16420 PF01012 Electron transfer flavoprotein domain AvCA_16440 PF13336 Acetyl-CoA hydrolase/transferase C-terminal domain AvCA_16440 PF02550 Acetyl-CoA hydrolase/transferase N-terminal domain AvCA_16450 PF13333 Integrase core domain AvCA_16450 PF13276 HTH-like domain AvCA_16450 PF00665 Integrase core domain AvCA_16470 PF03466 LysR substrate binding domain AvCA_16470 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AvCA_16540 PF01527 Transposase AvCA_16550 PF00665 Integrase core domain AvCA_16550 PF13276 HTH-like domain AvCA_16550 PF13333 Integrase core domain AvCA_16580 PF07690 Major Facilitator Superfamily AvCA_16590 PF08240 Alcohol dehydrogenase GroES-like domain AvCA_16590 PF00107 Zinc-binding dehydrogenase AvCA_16600 PF12833 Helix-turn-helix domain AvCA_16610 PF00294 pfkB family carbohydrate kinase AvCA_16620 PF02781 Glucose-6-phosphate dehydrogenase, C-terminal domain AvCA_16620 PF00479 Glucose-6-phosphate dehydrogenase, NAD binding domain AvCA_16630 PF00342 Phosphoglucose isomerase AvCA_16650 PF02264 LamB porin AvCA_16690 PF00266 Aminotransferase class-V AvCA_16700 PF13336 Acetyl-CoA hydrolase/transferase C-terminal domain AvCA_16700 PF02550 Acetyl-CoA hydrolase/transferase N-terminal domain AvCA_16720 PF03466 LysR substrate binding domain AvCA_16720 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AvCA_16730 PF00106 short chain dehydrogenase AvCA_16780 PF00005 ABC transporter AvCA_16790 PF13533 Biotin-lipoyl like AvCA_16800 PF07282 Putative transposase DNA-binding domain AvCA_16800 PF12323 Helix-turn-helix domain AvCA_16800 PF01385 Probable transposase AvCA_16810 PF01180 Dihydroorotate dehydrogenase AvCA_16820 PF00698 Acyl transferase domain AvCA_16820 PF00550 Phosphopantetheine attachment site AvCA_16820 PF14765 Polyketide synthase dehydratase AvCA_16820 PF08659 KR domain AvCA_16820 PF16197 Ketoacyl-synthetase C-terminal extension AvCA_16820 PF02801 Beta-ketoacyl synthase, C-terminal domain AvCA_16820 PF08240 Alcohol dehydrogenase GroES-like domain AvCA_16820 PF00109 Beta-ketoacyl synthase, N-terminal domain AvCA_16870 PF00106 short chain dehydrogenase AvCA_16890 PF07995 Glucose / Sorbosone dehydrogenase AvCA_16900 PF17783 CvfB-like winged helix domain AvCA_16900 PF13509 S1 domain AvCA_16940 PF12307 Protein of unknown function (DUF3631) AvCA_17090 PF03466 LysR substrate binding domain AvCA_17090 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AvCA_17120 PF03600 Citrate transporter AvCA_17140 PF03573 outer membrane porin, OprD family AvCA_17170 PF18395 Cas3 C-terminal domain AvCA_17170 PF18019 HD domain AvCA_17180 PF09481 CRISPR-associated protein Cse1 (CRISPR_cse1) AvCA_17190 PF09485 CRISPR-associated protein Cse2 (CRISPR_cse2) AvCA_17200 PF09344 CT1975-like protein AvCA_17220 PF08798 CRISPR associated protein AvCA_17250 PF09907 HigB_toxin, RelE-like toxic component of a toxin-antitoxin system AvCA_17290 PF13439 Glycosyltransferase Family 4 AvCA_17300 PF07690 Major Facilitator Superfamily AvCA_17320 PF03573 outer membrane porin, OprD family AvCA_17330 PF00196 Bacterial regulatory proteins, luxR family AvCA_17330 PF00072 Response regulator receiver domain AvCA_17340 PF07730 Histidine kinase AvCA_17340 PF00672 HAMP domain AvCA_17340 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AvCA_17350 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain AvCA_17350 PF00378 Enoyl-CoA hydratase/isomerase AvCA_17350 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain AvCA_17360 PF02803 Thiolase, C-terminal domain AvCA_17360 PF00108 Thiolase, N-terminal domain AvCA_17370 PF00501 AMP-binding enzyme AvCA_17370 PF13193 AMP-binding enzyme C-terminal domain AvCA_17380 PF02770 Acyl-CoA dehydrogenase, middle domain AvCA_17380 PF00441 Acyl-CoA dehydrogenase, C-terminal domain AvCA_17380 PF12806 Acetyl-CoA dehydrogenase C-terminal like AvCA_17380 PF02771 Acyl-CoA dehydrogenase, N-terminal domain AvCA_17420 PF02374 Anion-transporting ATPase AvCA_17420 PF17886 HSP20-like domain found in ArsA AvCA_17440 PF01773 Na+ dependent nucleoside transporter N-terminus AvCA_17440 PF07662 Na+ dependent nucleoside transporter C-terminus AvCA_17440 PF07670 Nucleoside recognition AvCA_17500 PF01663 Type I phosphodiesterase / nucleotide pyrophosphatase AvCA_17510 PF00528 Binding-protein-dependent transport system inner membrane component AvCA_17520 PF00005 ABC transporter AvCA_17550 PF00753 Metallo-beta-lactamase superfamily AvCA_17560 PF01144 Coenzyme A transferase AvCA_17570 PF01144 Coenzyme A transferase AvCA_17590 PF00106 short chain dehydrogenase AvCA_17610 PF01590 GAF domain AvCA_17610 PF00158 Sigma-54 interaction domain AvCA_17630 PF00479 Glucose-6-phosphate dehydrogenase, NAD binding domain AvCA_17630 PF02781 Glucose-6-phosphate dehydrogenase, C-terminal domain AvCA_17640 PF01182 Glucosamine-6-phosphate isomerases/6-phosphogluconolactonase AvCA_17650 PF00342 Phosphoglucose isomerase AvCA_17660 PF07690 Major Facilitator Superfamily AvCA_17670 PF00294 pfkB family carbohydrate kinase AvCA_17690 PF07660 Secretin and TonB N terminus short domain AvCA_17690 PF00593 TonB dependent receptor AvCA_17690 PF07715 TonB-dependent Receptor Plug Domain AvCA_17740 PF07690 Major Facilitator Superfamily AvCA_17760 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AvCA_17760 PF03466 LysR substrate binding domain AvCA_17790 PF00672 HAMP domain AvCA_17790 PF00512 His Kinase A (phospho-acceptor) domain AvCA_17790 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AvCA_17800 PF00486 Transcriptional regulatory protein, C terminal AvCA_17800 PF00072 Response regulator receiver domain AvCA_17820 PF08443 RimK-like ATP-grasp domain AvCA_17820 PF18030 RimK PreATP-grasp domain AvCA_17850 PF00391 PEP-utilising enzyme, mobile domain AvCA_17850 PF01326 Pyruvate phosphate dikinase, PEP/pyruvate binding domain AvCA_17850 PF02896 PEP-utilising enzyme, TIM barrel domain AvCA_17870 PF10070 Uncharacterized protein conserved in bacteria (DUF2309) AvCA_17880 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus AvCA_17880 PF00361 Proton-conducting membrane transporter AvCA_17900 PF00860 Permease family AvCA_17910 PF13439 Glycosyltransferase Family 4 AvCA_17910 PF00534 Glycosyl transferases group 1 AvCA_17950 PF00313 'Cold-shock' DNA-binding domain AvCA_17990 PF01844 HNH endonuclease AvCA_18000 PF12419 SNF2 Helicase protein AvCA_18000 PF00271 Helicase conserved C-terminal domain AvCA_18000 PF00176 SNF2 family N-terminal domain AvCA_18010 PF00512 His Kinase A (phospho-acceptor) domain AvCA_18010 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AvCA_18010 PF02743 Cache domain AvCA_18020 PF00158 Sigma-54 interaction domain AvCA_18020 PF00072 Response regulator receiver domain AvCA_18020 PF02954 Bacterial regulatory protein, Fis family AvCA_18040 PF00083 Sugar (and other) transporter AvCA_18090 PF09849 Uncharacterized protein conserved in bacteria (DUF2076) AvCA_18100 PF03831 PhnA domain AvCA_18100 PF08274 PhnA Zinc-Ribbon AvCA_18150 PF03573 outer membrane porin, OprD family AvCA_18190 PF01709 Transcriptional regulator AvCA_18220 PF01925 Sulfite exporter TauE/SafE AvCA_18240 PF05164 Cell division protein ZapA AvCA_18250 PF01757 Acyltransferase family AvCA_18310 PF01136 Peptidase family U32 AvCA_18310 PF12392 Collagenase AvCA_18390 PF01548 Transposase AvCA_18390 PF02371 Transposase IS116/IS110/IS902 family AvCA_18430 PF00724 NADH:flavin oxidoreductase / NADH oxidase family AvCA_18440 PF00171 Aldehyde dehydrogenase family AvCA_18450 PF16925 Tetracyclin repressor-like, C-terminal domain AvCA_18450 PF00440 Bacterial regulatory proteins, tetR family AvCA_18460 PF00107 Zinc-binding dehydrogenase AvCA_18460 PF08240 Alcohol dehydrogenase GroES-like domain AvCA_18480 PF00216 Bacterial DNA-binding protein AvCA_18520 PF00403 Heavy-metal-associated domain AvCA_18570 PF00873 AcrB/AcrD/AcrF family AvCA_18590 PF00501 AMP-binding enzyme AvCA_18610 PF00106 short chain dehydrogenase AvCA_18630 PF00072 Response regulator receiver domain AvCA_18630 PF00486 Transcriptional regulatory protein, C terminal AvCA_18640 PF00512 His Kinase A (phospho-acceptor) domain AvCA_18640 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AvCA_18640 PF08521 Two-component sensor kinase N-terminal AvCA_18660 PF04102 SlyX AvCA_18670 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle AvCA_18680 PF00528 Binding-protein-dependent transport system inner membrane component AvCA_18700 PF00005 ABC transporter AvCA_18700 PF08352 Oligopeptide/dipeptide transporter, C-terminal region AvCA_18710 PF07023 Protein of unknown function (DUF1315) AvCA_18730 PF17432 Domain of unknown function (DUF3458_C) ARM repeats AvCA_18730 PF11940 Domain of unknown function (DUF3458) Ig-like fold AvCA_18730 PF01433 Peptidase family M1 domain AvCA_18740 PF13336 Acetyl-CoA hydrolase/transferase C-terminal domain AvCA_18740 PF02550 Acetyl-CoA hydrolase/transferase N-terminal domain AvCA_18750 PF00078 Reverse transcriptase (RNA-dependent DNA polymerase) AvCA_18790 PF13519 von Willebrand factor type A domain AvCA_18820 PF01882 Protein of unknown function DUF58 AvCA_18830 PF07726 ATPase family associated with various cellular activities (AAA) AvCA_18830 PF17863 AAA lid domain AvCA_18850 PF03706 Lysylphosphatidylglycerol synthase TM region AvCA_18850 PF09924 Uncharacterised conserved protein (DUF2156) AvCA_18860 PF05088 Bacterial NAD-glutamate dehydrogenase AvCA_18880 PF00561 alpha/beta hydrolase fold AvCA_18900 PF01180 Dihydroorotate dehydrogenase AvCA_18910 PF04957 Ribosome modulation factor AvCA_18930 PF10672 S-adenosylmethionine-dependent methyltransferase AvCA_18930 PF01170 Putative RNA methylase family UPF0020 AvCA_18930 PF02926 THUMP domain AvCA_18940 PF02113 D-Ala-D-Ala carboxypeptidase 3 (S13) family AvCA_18960 PF01966 HD domain AvCA_19010 PF00565 Staphylococcal nuclease homologue AvCA_19040 PF01738 Dienelactone hydrolase family AvCA_19070 PF03573 outer membrane porin, OprD family AvCA_19090 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD AvCA_19110 PF02525 Flavodoxin-like fold AvCA_19120 PF00271 Helicase conserved C-terminal domain AvCA_19120 PF00270 DEAD/DEAH box helicase AvCA_19130 PF10017 Histidine-specific methyltransferase, SAM-dependent AvCA_19140 PF12867 DinB superfamily AvCA_19140 PF03781 Sulfatase-modifying factor enzyme 1 AvCA_19150 PF00005 ABC transporter AvCA_19150 PF00664 ABC transporter transmembrane region AvCA_19160 PF03466 LysR substrate binding domain AvCA_19160 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AvCA_19170 PF00183 Hsp90 protein AvCA_19170 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AvCA_19190 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily AvCA_19210 PF10576 Iron-sulfur binding domain of endonuclease III AvCA_19210 PF00633 Helix-hairpin-helix motif AvCA_19210 PF00730 HhH-GPD superfamily base excision DNA repair protein AvCA_19220 PF02508 Rnf-Nqr subunit, membrane protein AvCA_19230 PF04205 FMN-binding domain AvCA_19240 PF03116 NQR2, RnfD, RnfE family AvCA_19250 PF13375 RnfC Barrel sandwich hybrid domain AvCA_19250 PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit AvCA_19250 PF10531 SLBB domain AvCA_19250 PF12838 4Fe-4S dicluster domain AvCA_19260 PF04060 Putative Fe-S cluster AvCA_19270 PF02508 Rnf-Nqr subunit, membrane protein AvCA_19280 PF01588 Putative tRNA binding domain AvCA_19280 PF09334 tRNA synthetases class I (M) AvCA_19290 PF10609 NUBPL iron-transfer P-loop NTPase AvCA_19300 PF00692 dUTPase AvCA_19310 PF00156 Phosphoribosyl transferase domain AvCA_19310 PF01738 Dienelactone hydrolase family AvCA_19320 PF00156 Phosphoribosyl transferase domain AvCA_19320 PF05139 Erythromycin esterase AvCA_19340 PF01804 Penicillin amidase AvCA_19400 PF02810 SEC-C motif AvCA_19450 PF13307 Helicase C-terminal domain AvCA_19450 PF06733 DEAD_2 AvCA_19460 PF17992 Agarase CBM like domain AvCA_19460 PF02449 Beta-galactosidase AvCA_19470 PF00144 Beta-lactamase AvCA_19500 PF10590 Pyridoxine 5'-phosphate oxidase C-terminal dimerisation region AvCA_19500 PF01243 Pyridoxamine 5'-phosphate oxidase AvCA_19520 PF05433 Glycine zipper 2TM domain AvCA_19530 PF04039 Domain related to MnhB subunit of Na+/H+ antiporter AvCA_19530 PF13244 Domain of unknown function (DUF4040) AvCA_19530 PF00361 Proton-conducting membrane transporter AvCA_19530 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus AvCA_19540 PF00420 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L AvCA_19550 PF00361 Proton-conducting membrane transporter AvCA_19560 PF01899 Na+/H+ ion antiporter subunit AvCA_19570 PF04066 Multiple resistance and pH regulation protein F (MrpF / PhaF) AvCA_19580 PF03334 Na+/H+ antiporter subunit AvCA_19610 PF00005 ABC transporter AvCA_19620 PF00005 ABC transporter AvCA_19620 PF12399 Branched-chain amino acid ATP-binding cassette transporter AvCA_19630 PF11862 Domain of unknown function (DUF3382) AvCA_19630 PF02653 Branched-chain amino acid transport system / permease component AvCA_19640 PF02653 Branched-chain amino acid transport system / permease component AvCA_19650 PF13458 Periplasmic binding protein AvCA_19670 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain AvCA_19670 PF02874 ATP synthase alpha/beta family, beta-barrel domain AvCA_19680 PF02823 ATP synthase, Delta/Epsilon chain, beta-sandwich domain AvCA_19710 PF00119 ATP synthase A chain AvCA_19720 PF00137 ATP synthase subunit C AvCA_19730 PF00430 ATP synthase B/B' CF(0) AvCA_19740 PF00306 ATP synthase alpha/beta chain, C terminal domain AvCA_19740 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain AvCA_19760 PF00528 Binding-protein-dependent transport system inner membrane component AvCA_19770 PF00528 Binding-protein-dependent transport system inner membrane component AvCA_19780 PF00005 ABC transporter AvCA_19800 PF01219 Prokaryotic diacylglycerol kinase AvCA_19810 PF01261 Xylose isomerase-like TIM barrel AvCA_19830 PF12170 DNA polymerase III tau subunit V interacting with alpha AvCA_19830 PF12168 DNA polymerase III subunits tau domain IV DnaB-binding AvCA_19830 PF12169 DNA polymerase III subunits gamma and tau domain III AvCA_19840 PF02575 YbaB/EbfC DNA-binding family AvCA_19850 PF13662 Toprim domain AvCA_19850 PF02132 RecR protein AvCA_19880 PF02322 Cytochrome bd terminal oxidase subunit II AvCA_19890 PF01654 Cytochrome bd terminal oxidase subunit I AvCA_19910 PF13545 Crp-like helix-turn-helix domain AvCA_19910 PF00027 Cyclic nucleotide-binding domain AvCA_19920 PF06969 HemN C-terminal domain AvCA_19920 PF04055 Radical SAM superfamily AvCA_19950 PF00403 Heavy-metal-associated domain AvCA_19970 PF13746 4Fe-4S dicluster domain AvCA_19970 PF12801 4Fe-4S binding domain AvCA_19970 PF11614 IG-like fold at C-terminal of FixG, putative oxidoreductase AvCA_19980 PF14715 N-terminal domain of cytochrome oxidase-cbb3, FixP AvCA_19980 PF13442 Cytochrome C oxidase, cbb3-type, subunit III AvCA_20010 PF00115 Cytochrome C and Quinol oxidase polypeptide I AvCA_20040 PF00694 Aconitase C-terminal domain AvCA_20040 PF00330 Aconitase family (aconitate hydratase) AvCA_20050 PF01728 FtsJ-like methyltransferase AvCA_20050 PF18125 RlmM ferredoxin-like domain AvCA_20060 PF01206 Sulfurtransferase TusA AvCA_20090 PF00155 Aminotransferase class I and II AvCA_20100 PF00271 Helicase conserved C-terminal domain AvCA_20100 PF17757 UvrB interaction domain AvCA_20100 PF04851 Type III restriction enzyme, res subunit AvCA_20100 PF12344 Ultra-violet resistance protein B AvCA_20100 PF02151 UvrB/uvrC motif AvCA_20110 PF00749 tRNA synthetases class I (E and Q), catalytic domain AvCA_20120 PF00924 Mechanosensitive ion channel AvCA_20160 PF00849 RNA pseudouridylate synthase AvCA_20170 PF00011 Hsp20/alpha crystallin family AvCA_20190 PF00106 short chain dehydrogenase AvCA_20200 PF09339 IclR helix-turn-helix domain AvCA_20200 PF01614 Bacterial transcriptional regulator AvCA_20210 PF08501 Shikimate dehydrogenase substrate binding domain AvCA_20210 PF18317 Shikimate 5'-dehydrogenase C-terminal domain AvCA_20220 PF00890 FAD binding domain AvCA_20280 PF12833 Helix-turn-helix domain AvCA_20290 PF00107 Zinc-binding dehydrogenase AvCA_20290 PF08240 Alcohol dehydrogenase GroES-like domain AvCA_20300 PF07690 Major Facilitator Superfamily AvCA_20310 PF12833 Helix-turn-helix domain AvCA_20310 PF02311 AraC-like ligand binding domain AvCA_20360 PF07690 Major Facilitator Superfamily AvCA_20380 PF01266 FAD dependent oxidoreductase AvCA_20420 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) AvCA_20420 PF03129 Anticodon binding domain AvCA_20420 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain AvCA_20420 PF02824 TGS domain AvCA_20430 PF00707 Translation initiation factor IF-3, C-terminal domain AvCA_20430 PF05198 Translation initiation factor IF-3, N-terminal domain AvCA_20440 PF01632 Ribosomal protein L35 AvCA_20450 PF00453 Ribosomal protein L20 AvCA_20460 PF01409 tRNA synthetases class II core domain (F) AvCA_20460 PF02912 Aminoacyl tRNA synthetase class II, N-terminal domain AvCA_20470 PF17759 Phenylalanyl tRNA synthetase beta chain CLM domain AvCA_20470 PF03483 B3/4 domain AvCA_20470 PF03484 tRNA synthetase B5 domain AvCA_20470 PF03147 Ferredoxin-fold anticodon binding domain AvCA_20470 PF01588 Putative tRNA binding domain AvCA_20480 PF00216 Bacterial DNA-binding protein AvCA_20540 PF13276 HTH-like domain AvCA_20540 PF00665 Integrase core domain AvCA_20540 PF13333 Integrase core domain AvCA_20550 PF01527 Transposase AvCA_20570 PF04333 MlaA lipoprotein AvCA_20590 PF02779 Transketolase, pyrimidine binding domain AvCA_20590 PF13292 1-deoxy-D-xylulose-5-phosphate synthase AvCA_20590 PF02780 Transketolase, C-terminal domain AvCA_20600 PF00348 Polyprenyl synthetase AvCA_20610 PF02609 Exonuclease VII small subunit AvCA_20620 PF00535 Glycosyl transferase family 2 AvCA_20630 PF04055 Radical SAM superfamily AvCA_20630 PF06463 Molybdenum Cofactor Synthesis C AvCA_20640 PF00293 NUDIX domain AvCA_20730 PF01370 NAD dependent epimerase/dehydratase family AvCA_20760 PF13243 Squalene-hopene cyclase C-terminal domain AvCA_20760 PF13249 Squalene-hopene cyclase N-terminal domain AvCA_20790 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AvCA_20790 PF03466 LysR substrate binding domain AvCA_20800 PF02525 Flavodoxin-like fold AvCA_20810 PF03466 LysR substrate binding domain AvCA_20810 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AvCA_20830 PF00724 NADH:flavin oxidoreductase / NADH oxidase family AvCA_20840 PF07690 Major Facilitator Superfamily AvCA_20860 PF07352 Bacteriophage Mu Gam like protein AvCA_20910 PF01968 Hydantoinase/oxoprolinase AvCA_20910 PF05378 Hydantoinase/oxoprolinase N-terminal region AvCA_20920 PF02538 Hydantoinase B/oxoprolinase AvCA_20930 PF08882 Acetone carboxylase gamma subunit AvCA_20940 PF01590 GAF domain AvCA_20940 PF00158 Sigma-54 interaction domain AvCA_20940 PF02954 Bacterial regulatory protein, Fis family AvCA_20980 PF00132 Bacterial transferase hexapeptide (six repeats) AvCA_21000 PF00266 Aminotransferase class-V AvCA_21010 PF00403 Heavy-metal-associated domain AvCA_21030 PF00665 Integrase core domain AvCA_21060 PF00378 Enoyl-CoA hydratase/isomerase AvCA_21100 PF04115 Ureidoglycolate lyase AvCA_21110 PF03561 Allantoicase repeat AvCA_21120 PF09349 OHCU decarboxylase AvCA_21120 PF01014 Uricase AvCA_21130 PF01522 Polysaccharide deacetylase AvCA_21140 PF00576 HIUase/Transthyretin family AvCA_21180 PF00106 short chain dehydrogenase AvCA_21190 PF13193 AMP-binding enzyme C-terminal domain AvCA_21190 PF00501 AMP-binding enzyme AvCA_21190 PF00975 Thioesterase domain AvCA_21190 PF00668 Condensation domain AvCA_21190 PF00550 Phosphopantetheine attachment site AvCA_21200 PF00857 Isochorismatase family AvCA_21200 PF00550 Phosphopantetheine attachment site AvCA_21210 PF13193 AMP-binding enzyme C-terminal domain AvCA_21210 PF00501 AMP-binding enzyme AvCA_21220 PF00425 chorismate binding enzyme AvCA_21230 PF07690 Major Facilitator Superfamily AvCA_21240 PF03401 Tripartite tricarboxylate transporter family receptor AvCA_21250 PF10397 Adenylosuccinate lyase C-terminus AvCA_21250 PF00206 Lyase AvCA_21270 PF01970 Tripartite tricarboxylate transporter TctA family AvCA_21280 PF07331 Tripartite tricarboxylate transporter TctB family AvCA_21290 PF03573 outer membrane porin, OprD family AvCA_21300 PF08402 TOBE domain AvCA_21300 PF00005 ABC transporter AvCA_21310 PF00528 Binding-protein-dependent transport system inner membrane component AvCA_21320 PF14537 Cytochrome c3 AvCA_21320 PF00890 FAD binding domain AvCA_21330 PF02668 Taurine catabolism dioxygenase TauD, TfdA family AvCA_21400 PF03466 LysR substrate binding domain AvCA_21400 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AvCA_21410 PF00497 Bacterial extracellular solute-binding proteins, family 3 AvCA_21420 PF02615 Malate/L-lactate dehydrogenase AvCA_21430 PF02913 FAD linked oxidases, C-terminal domain AvCA_21430 PF01565 FAD binding domain AvCA_21450 PF00528 Binding-protein-dependent transport system inner membrane component AvCA_21460 PF00528 Binding-protein-dependent transport system inner membrane component AvCA_21490 PF00043 Glutathione S-transferase, C-terminal domain AvCA_21490 PF02798 Glutathione S-transferase, N-terminal domain AvCA_21510 PF01053 Cys/Met metabolism PLP-dependent enzyme AvCA_21530 PF07715 TonB-dependent Receptor Plug Domain AvCA_21530 PF00593 TonB dependent receptor AvCA_21530 PF07660 Secretin and TonB N terminus short domain AvCA_21540 PF16220 Domain of unknown function (DUF4880) AvCA_21540 PF04773 FecR protein AvCA_21550 PF08281 Sigma-70, region 4 AvCA_21550 PF04542 Sigma-70 region 2 AvCA_21580 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain AvCA_21580 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain AvCA_21590 PF00596 Class II Aldolase and Adducin N-terminal domain AvCA_21600 PF00528 Binding-protein-dependent transport system inner membrane component AvCA_21610 PF00005 ABC transporter AvCA_21630 PF07715 TonB-dependent Receptor Plug Domain AvCA_21630 PF00593 TonB dependent receptor AvCA_21660 PF00296 Luciferase-like monooxygenase AvCA_21680 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AvCA_21680 PF03466 LysR substrate binding domain AvCA_21690 PF02472 Biopolymer transport protein ExbD/TolR AvCA_21700 PF01618 MotA/TolQ/ExbB proton channel family AvCA_21710 PF03544 Gram-negative bacterial TonB protein C-terminal AvCA_21720 PF09084 NMT1/THI5 like AvCA_21730 PF00248 Aldo/keto reductase family AvCA_21780 PF00356 Bacterial regulatory proteins, lacI family AvCA_21810 PF02472 Biopolymer transport protein ExbD/TolR AvCA_21820 PF01618 MotA/TolQ/ExbB proton channel family AvCA_21840 PF03544 Gram-negative bacterial TonB protein C-terminal AvCA_21850 PF00296 Luciferase-like monooxygenase AvCA_21860 PF00296 Luciferase-like monooxygenase AvCA_21870 PF02668 Taurine catabolism dioxygenase TauD, TfdA family AvCA_21890 PF00296 Luciferase-like monooxygenase AvCA_21900 PF00724 NADH:flavin oxidoreductase / NADH oxidase family AvCA_21930 PF02910 Fumarate reductase flavoprotein C-term AvCA_21930 PF00890 FAD binding domain AvCA_21940 PF00384 Molybdopterin oxidoreductase AvCA_21940 PF01568 Molydopterin dinucleotide binding domain AvCA_21950 PF00561 alpha/beta hydrolase fold AvCA_21960 PF02668 Taurine catabolism dioxygenase TauD, TfdA family AvCA_21980 PF00005 ABC transporter AvCA_21990 PF00528 Binding-protein-dependent transport system inner membrane component AvCA_22000 PF00325 Bacterial regulatory proteins, crp family AvCA_22000 PF00027 Cyclic nucleotide-binding domain AvCA_22010 PF02264 LamB porin AvCA_22030 PF08240 Alcohol dehydrogenase GroES-like domain AvCA_22030 PF00107 Zinc-binding dehydrogenase AvCA_22040 PF00171 Aldehyde dehydrogenase family AvCA_22050 PF02734 DAK2 domain AvCA_22060 PF02733 Dak1 domain AvCA_22080 PF13407 Periplasmic binding protein domain AvCA_22090 PF02653 Branched-chain amino acid transport system / permease component AvCA_22100 PF00005 ABC transporter AvCA_22120 PF02502 Ribose/Galactose Isomerase AvCA_22130 PF13419 Haloacid dehalogenase-like hydrolase AvCA_22140 PF00923 Transaldolase/Fructose-6-phosphate aldolase AvCA_22150 PF02779 Transketolase, pyrimidine binding domain AvCA_22150 PF00456 Transketolase, thiamine diphosphate binding domain AvCA_22150 PF02780 Transketolase, C-terminal domain AvCA_22160 PF06026 Ribose 5-phosphate isomerase A (phosphoriboisomerase A) AvCA_22170 PF04198 Putative sugar-binding domain AvCA_22190 PF00224 Pyruvate kinase, barrel domain AvCA_22190 PF02887 Pyruvate kinase, alpha/beta domain AvCA_22210 PF00113 Enolase, C-terminal TIM barrel domain AvCA_22210 PF03952 Enolase, N-terminal domain AvCA_22220 PF13426 PAS domain AvCA_22220 PF00196 Bacterial regulatory proteins, luxR family AvCA_22240 PF00108 Thiolase, N-terminal domain AvCA_22240 PF02803 Thiolase, C-terminal domain AvCA_22250 PF00501 AMP-binding enzyme AvCA_22250 PF13193 AMP-binding enzyme C-terminal domain AvCA_22260 PF01979 Amidohydrolase family AvCA_22280 PF01315 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain AvCA_22280 PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase AvCA_22290 PF01799 [2Fe-2S] binding domain AvCA_22290 PF00111 2Fe-2S iron-sulfur cluster binding domain AvCA_22300 PF00962 Adenosine/AMP deaminase AvCA_22320 PF00665 Integrase core domain AvCA_22330 PF02668 Taurine catabolism dioxygenase TauD, TfdA family AvCA_22350 PF00158 Sigma-54 interaction domain AvCA_22370 PF00248 Aldo/keto reductase family AvCA_22380 PF00043 Glutathione S-transferase, C-terminal domain AvCA_22380 PF02798 Glutathione S-transferase, N-terminal domain AvCA_22390 PF02668 Taurine catabolism dioxygenase TauD, TfdA family AvCA_22450 PF03573 outer membrane porin, OprD family AvCA_22470 PF02447 GntP family permease AvCA_22520 PF00528 Binding-protein-dependent transport system inner membrane component AvCA_22530 PF00528 Binding-protein-dependent transport system inner membrane component AvCA_22550 PF00005 ABC transporter AvCA_22560 PF03573 outer membrane porin, OprD family AvCA_22590 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AvCA_22590 PF03459 TOBE domain AvCA_22600 PF02146 Sir2 family AvCA_22620 PF02798 Glutathione S-transferase, N-terminal domain AvCA_22620 PF00043 Glutathione S-transferase, C-terminal domain AvCA_22630 PF00593 TonB dependent receptor AvCA_22630 PF07715 TonB-dependent Receptor Plug Domain AvCA_22640 PF16220 Domain of unknown function (DUF4880) AvCA_22640 PF04773 FecR protein AvCA_22650 PF04542 Sigma-70 region 2 AvCA_22650 PF08281 Sigma-70, region 4 AvCA_22730 PF17910 FeoB cytosolic helical domain AvCA_22730 PF07664 Ferrous iron transport protein B C terminus AvCA_22730 PF02421 Ferrous iron transport protein B AvCA_22730 PF07670 Nucleoside recognition AvCA_22760 PF00210 Ferritin-like domain AvCA_22780 PF00990 Diguanylate cyclase, GGDEF domain AvCA_22780 PF17151 Periplasmic sensor domain AvCA_22800 PF00202 Aminotransferase class-III AvCA_22840 PF06977 SdiA-regulated AvCA_22880 PF01471 Putative peptidoglycan binding domain AvCA_22880 PF13401 AAA domain AvCA_22930 PF00689 Cation transporting ATPase, C-terminus AvCA_22930 PF00690 Cation transporter/ATPase, N-terminus AvCA_22970 PF01258 Prokaryotic dksA/traR C4-type zinc finger AvCA_22980 PF07683 Cobalamin synthesis protein cobW C-terminal domain AvCA_22980 PF02492 CobW/HypB/UreG, nucleotide-binding domain AvCA_23000 PF01026 TatD related DNase AvCA_23020 PF01464 Transglycosylase SLT domain AvCA_23020 PF00497 Bacterial extracellular solute-binding proteins, family 3 AvCA_23040 PF03449 Transcription elongation factor, N-terminal AvCA_23040 PF01272 Transcription elongation factor, GreA/GreB, C-term AvCA_23060 PF00005 ABC transporter AvCA_23070 PF13472 GDSL-like Lipase/Acylhydrolase family AvCA_23090 PF03734 L,D-transpeptidase catalytic domain AvCA_23090 PF17969 L,D-transpeptidase C-terminal domain AvCA_23100 PF11839 Alanine-zipper, major outer membrane lipoprotein AvCA_23130 PF00793 DAHP synthetase I family AvCA_23140 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AvCA_23140 PF03466 LysR substrate binding domain AvCA_23150 PF01507 Phosphoadenosine phosphosulfate reductase family AvCA_23160 PF04715 Anthranilate synthase component I, N terminal region AvCA_23160 PF00425 chorismate binding enzyme AvCA_23170 PF18030 RimK PreATP-grasp domain AvCA_23170 PF08443 RimK-like ATP-grasp domain AvCA_23200 PF07729 FCD domain AvCA_23200 PF00392 Bacterial regulatory proteins, gntR family AvCA_23220 PF00285 Citrate synthase, C-terminal domain AvCA_23230 PF00330 Aconitase family (aconitate hydratase) AvCA_23230 PF00694 Aconitase C-terminal domain AvCA_23250 PF04303 PrpF protein AvCA_23260 PF03618 Kinase/pyrophosphorylase AvCA_23280 PF02896 PEP-utilising enzyme, TIM barrel domain AvCA_23280 PF00391 PEP-utilising enzyme, mobile domain AvCA_23280 PF01326 Pyruvate phosphate dikinase, PEP/pyruvate binding domain AvCA_23290 PF03737 Aldolase/RraA AvCA_23310 PF05552 Conserved TM helix AvCA_23330 PF05736 OprF membrane domain AvCA_23330 PF00691 OmpA family AvCA_23340 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases AvCA_23350 PF01568 Molydopterin dinucleotide binding domain AvCA_23350 PF00384 Molybdopterin oxidoreductase AvCA_23350 PF04324 BFD-like [2Fe-2S] binding domain AvCA_23350 PF04879 Molybdopterin oxidoreductase Fe4S4 domain AvCA_23360 PF00355 Rieske [2Fe-2S] domain AvCA_23370 PF01077 Nitrite and sulphite reductase 4Fe-4S domain AvCA_23370 PF18267 Rubredoxin NAD+ reductase C-terminal domain AvCA_23370 PF07992 Pyridine nucleotide-disulphide oxidoreductase AvCA_23370 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain AvCA_23370 PF04324 BFD-like [2Fe-2S] binding domain AvCA_23380 PF03793 PASTA domain AvCA_23380 PF00069 Protein kinase domain AvCA_23390 PF07690 Major Facilitator Superfamily AvCA_23410 PF00294 pfkB family carbohydrate kinase AvCA_23420 PF07714 Protein tyrosine kinase AvCA_23430 PF00155 Aminotransferase class I and II AvCA_23450 PF08376 Nitrate and nitrite sensing AvCA_23450 PF03861 ANTAR domain AvCA_23460 PF00005 ABC transporter AvCA_23470 PF00330 Aconitase family (aconitate hydratase) AvCA_23470 PF06434 Aconitate hydratase 2 N-terminus AvCA_23470 PF11791 Aconitate B N-terminal domain AvCA_23490 PF06175 tRNA-(MS[2]IO[6]A)-hydroxylase (MiaE) AvCA_23500 PF00149 Calcineurin-like phosphoesterase AvCA_23510 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD AvCA_23520 PF03950 tRNA synthetases class I (E and Q), anti-codon binding domain AvCA_23520 PF00749 tRNA synthetases class I (E and Q), catalytic domain AvCA_23530 PF01406 tRNA synthetases class I (C) catalytic domain AvCA_23530 PF09190 DALR domain AvCA_23540 PF02882 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain AvCA_23540 PF00763 Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain AvCA_23550 PF05698 Bacterial trigger factor protein (TF) C-terminus AvCA_23550 PF05697 Bacterial trigger factor protein (TF) AvCA_23550 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase AvCA_23570 PF00574 Clp protease AvCA_23580 PF06689 ClpX C4-type zinc finger AvCA_23580 PF10431 C-terminal, D2-small domain, of ClpB protein AvCA_23580 PF07724 AAA domain (Cdc48 subfamily) AvCA_23590 PF05362 Lon protease (S16) C-terminal proteolytic domain AvCA_23590 PF02190 ATP-dependent protease La (LON) substrate-binding domain AvCA_23590 PF00004 ATPase family associated with various cellular activities (AAA) AvCA_23600 PF00216 Bacterial DNA-binding protein AvCA_23620 PF09312 SurA N-terminal domain AvCA_23620 PF00639 PPIC-type PPIASE domain AvCA_23630 PF07167 Poly-beta-hydroxybutyrate polymerase (PhaC) N-terminus AvCA_23640 PF00108 Thiolase, N-terminal domain AvCA_23640 PF02803 Thiolase, C-terminal domain AvCA_23650 PF00106 short chain dehydrogenase AvCA_23680 PF05233 PHB accumulation regulatory domain AvCA_23680 PF07879 PHB/PHA accumulation regulator DNA-binding domain AvCA_23690 PF01227 GTP cyclohydrolase I AvCA_23720 PF00857 Isochorismatase family AvCA_23730 PF05175 Methyltransferase small domain AvCA_23780 PF00596 Class II Aldolase and Adducin N-terminal domain AvCA_23790 PF03079 ARD/ARD' family AvCA_23820 PF17284 Spermidine synthase tetramerisation domain AvCA_23850 PF18081 Fanconi anemia-associated nuclease SAP domain AvCA_23850 PF08774 VRR-NUC domain AvCA_23860 PF03969 AFG1-like ATPase AvCA_23950 PF13340 Putative transposase of IS4/5 family (DUF4096) AvCA_23960 PF08787 Alginate lyase AvCA_24000 PF00460 Flagella basal body rod protein AvCA_24010 PF06429 Flagellar basal body rod FlgEFG protein C-terminal AvCA_24010 PF00460 Flagella basal body rod protein AvCA_24020 PF13861 FlgD Tudor-like domain AvCA_24020 PF13860 FlgD Ig-like domain AvCA_24020 PF03963 Flagellar hook capping protein - N-terminal region AvCA_24030 PF00460 Flagella basal body rod protein AvCA_24030 PF07559 Flagellar basal body protein FlaE AvCA_24030 PF06429 Flagellar basal body rod FlgEFG protein C-terminal AvCA_24040 PF00460 Flagella basal body rod protein AvCA_24040 PF06429 Flagellar basal body rod FlgEFG protein C-terminal AvCA_24050 PF06429 Flagellar basal body rod FlgEFG protein C-terminal AvCA_24050 PF00460 Flagella basal body rod protein AvCA_24060 PF02107 Flagellar L-ring protein AvCA_24070 PF02119 Flagellar P-ring protein AvCA_24080 PF10135 Rod binding protein AvCA_24080 PF01832 Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase AvCA_24090 PF06429 Flagellar basal body rod FlgEFG protein C-terminal AvCA_24090 PF00460 Flagella basal body rod protein AvCA_24100 PF00669 Bacterial flagellin N-terminal helical region AvCA_24110 PF01311 Bacterial export proteins, family 1 AvCA_24120 PF01313 Bacterial export proteins, family 3 AvCA_24130 PF00813 FliP family AvCA_24140 PF04347 Flagellar biosynthesis protein, FliO AvCA_24150 PF16973 Flagellar motor switch protein FliN N-terminal AvCA_24150 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term AvCA_24160 PF02154 Flagellar motor switch protein FliM AvCA_24160 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term AvCA_24170 PF03748 Flagellar basal body-associated protein FliL AvCA_24200 PF18269 T3SS EscN ATPase C-terminal domain AvCA_24200 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain AvCA_24220 PF14841 FliG middle domain AvCA_24220 PF01706 FliG C-terminal domain AvCA_24220 PF14842 FliG N-terminal domain AvCA_24230 PF08345 Flagellar M-ring protein C-terminal AvCA_24230 PF01514 Secretory protein of YscJ/FliF family AvCA_24250 PF07196 Flagellin hook IN motif AvCA_24250 PF07195 Flagellar hook-associated protein 2 C-terminus AvCA_24250 PF02465 Flagellar hook-associated protein 2 N-terminus AvCA_24260 PF02561 Flagellar protein FliS AvCA_24270 PF05400 Flagellar protein FliT AvCA_24290 PF01312 FlhB HrpN YscU SpaS Family AvCA_24300 PF05247 Flagellar transcriptional activator (FlhD) AvCA_24310 PF05280 Flagellar transcriptional activator (FlhC) AvCA_24320 PF01618 MotA/TolQ/ExbB proton channel family AvCA_24330 PF13677 Membrane MotB of proton-channel complex MotA/MotB AvCA_24330 PF00691 OmpA family AvCA_24340 PF02895 Signal transducing histidine kinase, homodimeric domain AvCA_24340 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AvCA_24340 PF09078 CheY binding AvCA_24340 PF01584 CheW-like domain AvCA_24340 PF01627 Hpt domain AvCA_24350 PF01584 CheW-like domain AvCA_24360 PF17200 Single Cache domain 2 AvCA_24360 PF00672 HAMP domain AvCA_24360 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain AvCA_24370 PF00672 HAMP domain AvCA_24370 PF02203 Tar ligand binding domain homologue AvCA_24370 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain AvCA_24380 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain AvCA_24380 PF08447 PAS fold AvCA_24390 PF01739 CheR methyltransferase, SAM binding domain AvCA_24390 PF03705 CheR methyltransferase, all-alpha domain AvCA_24410 PF00005 ABC transporter AvCA_24410 PF08352 Oligopeptide/dipeptide transporter, C-terminal region AvCA_24430 PF00528 Binding-protein-dependent transport system inner membrane component AvCA_24440 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle AvCA_24470 PF18273 Type III R-M EcoP15I C-terminal domain AvCA_24470 PF01555 DNA methylase AvCA_24520 PF13492 GAF domain AvCA_24520 PF13493 Domain of unknown function (DUF4118) AvCA_24520 PF02702 Osmosensitive K+ channel His kinase sensor domain AvCA_24520 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AvCA_24520 PF00512 His Kinase A (phospho-acceptor) domain AvCA_24530 PF00072 Response regulator receiver domain AvCA_24530 PF00486 Transcriptional regulatory protein, C terminal AvCA_24540 PF02705 K+ potassium transporter AvCA_24590 PF01609 Transposase DDE domain AvCA_24590 PF05598 Transposase domain (DUF772) AvCA_24600 PF00078 Reverse transcriptase (RNA-dependent DNA polymerase) AvCA_24610 PF01609 Transposase DDE domain AvCA_24610 PF05598 Transposase domain (DUF772) AvCA_24680 PF00793 DAHP synthetase I family AvCA_24700 PF07690 Major Facilitator Superfamily AvCA_24730 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AvCA_24730 PF03466 LysR substrate binding domain AvCA_24740 PF00078 Reverse transcriptase (RNA-dependent DNA polymerase) AvCA_24750 PF00881 Nitroreductase family AvCA_24760 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AvCA_24760 PF03466 LysR substrate binding domain AvCA_24770 PF00107 Zinc-binding dehydrogenase AvCA_24770 PF08240 Alcohol dehydrogenase GroES-like domain AvCA_24810 PF03706 Lysylphosphatidylglycerol synthase TM region AvCA_24820 PF13091 PLD-like domain AvCA_24830 PF03372 Endonuclease/Exonuclease/phosphatase family AvCA_24840 PF08240 Alcohol dehydrogenase GroES-like domain AvCA_24840 PF13823 Alcohol dehydrogenase GroES-associated AvCA_24840 PF00107 Zinc-binding dehydrogenase AvCA_24850 PF00571 CBS domain AvCA_24850 PF00005 ABC transporter AvCA_24860 PF00128 Alpha amylase, catalytic domain AvCA_24860 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) AvCA_24880 PF00128 Alpha amylase, catalytic domain AvCA_24890 PF02446 4-alpha-glucanotransferase AvCA_24900 PF11941 Domain of unknown function (DUF3459) AvCA_24900 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) AvCA_24900 PF00128 Alpha amylase, catalytic domain AvCA_24910 PF00534 Glycosyl transferases group 1 AvCA_24910 PF08323 Starch synthase catalytic domain AvCA_24920 PF02515 CoA-transferase family III AvCA_24930 PF02771 Acyl-CoA dehydrogenase, N-terminal domain AvCA_24930 PF02770 Acyl-CoA dehydrogenase, middle domain AvCA_24930 PF00441 Acyl-CoA dehydrogenase, C-terminal domain AvCA_24940 PF00083 Sugar (and other) transporter AvCA_24960 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AvCA_24960 PF03466 LysR substrate binding domain AvCA_24970 PF01740 STAS domain AvCA_24970 PF00916 Sulfate permease family AvCA_24990 PF00483 Nucleotidyl transferase AvCA_25000 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily AvCA_25010 PF07992 Pyridine nucleotide-disulphide oxidoreductase AvCA_25010 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain AvCA_25030 PF00196 Bacterial regulatory proteins, luxR family AvCA_25030 PF00072 Response regulator receiver domain AvCA_25040 PF01541 GIY-YIG catalytic domain AvCA_25040 PF02151 UvrB/uvrC motif AvCA_25040 PF08459 UvrC Helix-hairpin-helix N-terminal AvCA_25050 PF01066 CDP-alcohol phosphatidyltransferase AvCA_25080 PF16295 Tetracyclin repressor-like, C-terminal domain AvCA_25080 PF00440 Bacterial regulatory proteins, tetR family AvCA_25090 PF07690 Major Facilitator Superfamily AvCA_25160 PF00072 Response regulator receiver domain AvCA_25170 PF00072 Response regulator receiver domain AvCA_25170 PF00512 His Kinase A (phospho-acceptor) domain AvCA_25170 PF01627 Hpt domain AvCA_25170 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AvCA_25180 PF03707 Bacterial signalling protein N terminal repeat AvCA_25180 PF00990 Diguanylate cyclase, GGDEF domain AvCA_25180 PF00563 EAL domain AvCA_25190 PF00990 Diguanylate cyclase, GGDEF domain AvCA_25190 PF13426 PAS domain AvCA_25190 PF00563 EAL domain AvCA_25210 PF02770 Acyl-CoA dehydrogenase, middle domain AvCA_25210 PF00441 Acyl-CoA dehydrogenase, C-terminal domain AvCA_25210 PF02771 Acyl-CoA dehydrogenase, N-terminal domain AvCA_25210 PF12806 Acetyl-CoA dehydrogenase C-terminal like AvCA_25220 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain AvCA_25220 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain AvCA_25230 PF00474 Sodium:solute symporter family AvCA_25250 PF00501 AMP-binding enzyme AvCA_25250 PF13193 AMP-binding enzyme C-terminal domain AvCA_25270 PF00989 PAS fold AvCA_25270 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AvCA_25270 PF00512 His Kinase A (phospho-acceptor) domain AvCA_25350 PF01804 Penicillin amidase AvCA_25360 PF00072 Response regulator receiver domain AvCA_25360 PF00196 Bacterial regulatory proteins, luxR family AvCA_25370 PF00440 Bacterial regulatory proteins, tetR family AvCA_25370 PF16925 Tetracyclin repressor-like, C-terminal domain AvCA_25380 PF11856 Protein of unknown function (DUF3376) AvCA_25380 PF01734 Patatin-like phospholipase AvCA_25470 PF01527 Transposase AvCA_25550 PF07715 TonB-dependent Receptor Plug Domain AvCA_25550 PF00593 TonB dependent receptor AvCA_25550 PF07660 Secretin and TonB N terminus short domain AvCA_25560 PF00550 Phosphopantetheine attachment site AvCA_25560 PF13193 AMP-binding enzyme C-terminal domain AvCA_25560 PF00501 AMP-binding enzyme AvCA_25560 PF00668 Condensation domain AvCA_25570 PF00668 Condensation domain AvCA_25570 PF00501 AMP-binding enzyme AvCA_25570 PF00550 Phosphopantetheine attachment site AvCA_25570 PF13193 AMP-binding enzyme C-terminal domain AvCA_25580 PF00668 Condensation domain AvCA_25580 PF00550 Phosphopantetheine attachment site AvCA_25580 PF07993 Male sterility protein AvCA_25580 PF13193 AMP-binding enzyme C-terminal domain AvCA_25580 PF00501 AMP-binding enzyme AvCA_25600 PF13434 L-lysine 6-monooxygenase (NADPH-requiring) AvCA_25610 PF02668 Taurine catabolism dioxygenase TauD, TfdA family AvCA_25620 PF00975 Thioesterase domain AvCA_25630 PF03621 MbtH-like protein AvCA_25640 PF00202 Aminotransferase class-III AvCA_25650 PF00668 Condensation domain AvCA_25650 PF13193 AMP-binding enzyme C-terminal domain AvCA_25650 PF00501 AMP-binding enzyme AvCA_25650 PF00550 Phosphopantetheine attachment site AvCA_25670 PF01645 Conserved region in glutamate synthase AvCA_25730 PF01738 Dienelactone hydrolase family AvCA_25730 PF00156 Phosphoribosyl transferase domain AvCA_25740 PF05139 Erythromycin esterase AvCA_25740 PF00156 Phosphoribosyl transferase domain AvCA_25760 PF00970 Oxidoreductase FAD-binding domain AvCA_25760 PF00175 Oxidoreductase NAD-binding domain AvCA_25760 PF00111 2Fe-2S iron-sulfur cluster binding domain AvCA_25770 PF00011 Hsp20/alpha crystallin family AvCA_25780 PF00118 TCP-1/cpn60 chaperonin family AvCA_25790 PF00582 Universal stress protein family AvCA_25830 PF02625 XdhC and CoxI family AvCA_25830 PF13478 XdhC Rossmann domain AvCA_25840 PF00034 Cytochrome c AvCA_25840 PF13442 Cytochrome C oxidase, cbb3-type, subunit III AvCA_25840 PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase AvCA_25850 PF01799 [2Fe-2S] binding domain AvCA_25850 PF00111 2Fe-2S iron-sulfur cluster binding domain AvCA_25860 PF00248 Aldo/keto reductase family AvCA_25870 PF03466 LysR substrate binding domain AvCA_25870 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AvCA_25880 PF00884 Sulfatase AvCA_25890 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain AvCA_25890 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain AvCA_25910 PF01451 Low molecular weight phosphotyrosine protein phosphatase AvCA_25920 PF01022 Bacterial regulatory protein, arsR family AvCA_25940 PF00158 Sigma-54 interaction domain AvCA_25940 PF18024 Helix-turn-helix domain AvCA_25950 PF03573 outer membrane porin, OprD family AvCA_25970 PF07690 Major Facilitator Superfamily AvCA_25990 PF00682 HMGL-like AvCA_26000 PF02515 CoA-transferase family III AvCA_26010 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AvCA_26010 PF03466 LysR substrate binding domain AvCA_26020 PF02347 Glycine cleavage system P-protein AvCA_26040 PF03315 Serine dehydratase beta chain AvCA_26040 PF03313 Serine dehydratase alpha chain AvCA_26050 PF01571 Aminomethyltransferase folate-binding domain AvCA_26050 PF08669 Glycine cleavage T-protein C-terminal barrel domain AvCA_26060 PF01799 [2Fe-2S] binding domain AvCA_26060 PF00111 2Fe-2S iron-sulfur cluster binding domain AvCA_26070 PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase AvCA_26090 PF00005 ABC transporter AvCA_26100 PF00005 ABC transporter AvCA_26100 PF12399 Branched-chain amino acid ATP-binding cassette transporter AvCA_26110 PF02653 Branched-chain amino acid transport system / permease component AvCA_26110 PF11862 Domain of unknown function (DUF3382) AvCA_26120 PF02653 Branched-chain amino acid transport system / permease component AvCA_26140 PF13458 Periplasmic binding protein AvCA_26160 PF01979 Amidohydrolase family AvCA_26180 PF01175 Urocanase Rossmann-like domain AvCA_26180 PF17392 Urocanase C-terminal domain AvCA_26180 PF17391 Urocanase N-terminal domain AvCA_26190 PF00356 Bacterial regulatory proteins, lacI family AvCA_26220 PF13407 Periplasmic binding protein domain AvCA_26270 PF09722 Protein of unknown function (DUF2384) AvCA_26290 PF00221 Aromatic amino acid lyase AvCA_26300 PF01979 Amidohydrolase family AvCA_26320 PF13192 Thioredoxin domain AvCA_26320 PF07992 Pyridine nucleotide-disulphide oxidoreductase AvCA_26340 PF00990 Diguanylate cyclase, GGDEF domain AvCA_26340 PF00563 EAL domain AvCA_26340 PF03707 Bacterial signalling protein N terminal repeat AvCA_26390 PF03466 LysR substrate binding domain AvCA_26390 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AvCA_26410 PF00593 TonB dependent receptor AvCA_26410 PF07715 TonB-dependent Receptor Plug Domain AvCA_26420 PF08241 Methyltransferase domain AvCA_26450 PF00005 ABC transporter AvCA_26470 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AvCA_26470 PF03466 LysR substrate binding domain AvCA_26480 PF00561 alpha/beta hydrolase fold AvCA_26490 PF00158 Sigma-54 interaction domain AvCA_26490 PF13185 GAF domain AvCA_26490 PF02954 Bacterial regulatory protein, Fis family AvCA_26510 PF01810 LysE type translocator AvCA_26600 PF04717 Type VI secretion system, phage-baseplate injector AvCA_26600 PF16671 Actin cross-linking domain AvCA_26610 PF17871 AAA lid domain AvCA_26610 PF00004 ATPase family associated with various cellular activities (AAA) AvCA_26610 PF07724 AAA domain (Cdc48 subfamily) AvCA_26610 PF10431 C-terminal, D2-small domain, of ClpB protein AvCA_26690 PF00069 Protein kinase domain AvCA_26810 PF00664 ABC transporter transmembrane region AvCA_26810 PF00005 ABC transporter AvCA_26820 PF00083 Sugar (and other) transporter AvCA_26820 PF07690 Major Facilitator Superfamily AvCA_26830 PF01266 FAD dependent oxidoreductase AvCA_26860 PF00392 Bacterial regulatory proteins, gntR family AvCA_26860 PF07729 FCD domain AvCA_26870 PF00356 Bacterial regulatory proteins, lacI family AvCA_26890 PF00294 pfkB family carbohydrate kinase AvCA_26900 PF07690 Major Facilitator Superfamily AvCA_26910 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain AvCA_26910 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain AvCA_26920 PF03573 outer membrane porin, OprD family AvCA_26940 PF02264 LamB porin AvCA_26980 PF09137 Glucodextranase, domain N AvCA_26980 PF00723 Glycosyl hydrolases family 15 AvCA_27030 PF00459 Inositol monophosphatase family AvCA_27040 PF00675 Insulinase (Peptidase family M16) AvCA_27040 PF05193 Peptidase M16 inactive domain AvCA_27080 PF07167 Poly-beta-hydroxybutyrate polymerase (PhaC) N-terminus AvCA_27090 PF11892 Domain of unknown function (DUF3412) AvCA_27090 PF14793 Pyrimidine/purine nucleotide 5'-monophosphate nucleosidases AvCA_27090 PF03641 Possible lysine decarboxylase AvCA_27130 PF07690 Major Facilitator Superfamily AvCA_27180 PF00206 Lyase AvCA_27180 PF10415 Fumarase C C-terminus AvCA_27190 PF01751 Toprim domain AvCA_27190 PF01131 DNA topoisomerase AvCA_27200 PF02264 LamB porin AvCA_27210 PF00171 Aldehyde dehydrogenase family AvCA_27220 PF03952 Enolase, N-terminal domain AvCA_27220 PF00113 Enolase, C-terminal TIM barrel domain AvCA_27240 PF02887 Pyruvate kinase, alpha/beta domain AvCA_27240 PF00224 Pyruvate kinase, barrel domain AvCA_27250 PF01081 KDPG and KHG aldolase AvCA_27260 PF02781 Glucose-6-phosphate dehydrogenase, C-terminal domain AvCA_27260 PF00479 Glucose-6-phosphate dehydrogenase, NAD binding domain AvCA_27270 PF01380 SIS domain AvCA_27270 PF01418 Helix-turn-helix domain, rpiR family AvCA_27280 PF00920 Dehydratase family AvCA_27300 PF00356 Bacterial regulatory proteins, lacI family AvCA_27300 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family AvCA_27320 PF00370 FGGY family of carbohydrate kinases, N-terminal domain AvCA_27320 PF02782 FGGY family of carbohydrate kinases, C-terminal domain AvCA_27330 PF02780 Transketolase, C-terminal domain AvCA_27330 PF02779 Transketolase, pyrimidine binding domain AvCA_27330 PF00456 Transketolase, thiamine diphosphate binding domain AvCA_27340 PF00923 Transaldolase/Fructose-6-phosphate aldolase AvCA_27350 PF13419 Haloacid dehalogenase-like hydrolase AvCA_27360 PF01232 Mannitol dehydrogenase Rossmann domain AvCA_27360 PF08125 Mannitol dehydrogenase C-terminal domain AvCA_27370 PF17912 MalK OB fold domain AvCA_27370 PF00005 ABC transporter AvCA_27380 PF00528 Binding-protein-dependent transport system inner membrane component AvCA_27390 PF00528 Binding-protein-dependent transport system inner membrane component AvCA_27420 PF12833 Helix-turn-helix domain AvCA_27420 PF02311 AraC-like ligand binding domain AvCA_27440 PF01676 Metalloenzyme superfamily AvCA_27440 PF06415 BPG-independent PGAM N-terminus (iPGM_N) AvCA_27450 PF10282 Lactonase, 7-bladed beta-propeller AvCA_27480 PF02514 CobN/Magnesium Chelatase AvCA_27520 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain AvCA_27520 PF01077 Nitrite and sulphite reductase 4Fe-4S domain AvCA_27540 PF00078 Reverse transcriptase (RNA-dependent DNA polymerase) AvCA_27550 PF08496 Peptidase family S49 N-terminal AvCA_27550 PF01343 Peptidase family S49 AvCA_27590 PF09297 NADH pyrophosphatase zinc ribbon domain AvCA_27590 PF00293 NUDIX domain AvCA_27590 PF09296 NADH pyrophosphatase-like rudimentary NUDIX domain AvCA_27640 PF13677 Membrane MotB of proton-channel complex MotA/MotB AvCA_27640 PF00691 OmpA family AvCA_27650 PF01618 MotA/TolQ/ExbB proton channel family AvCA_27670 PF09820 Predicted AAA-ATPase AvCA_27670 PF08011 PD-(D/E)XK nuclease superfamily AvCA_27690 PF01381 Helix-turn-helix AvCA_27700 PF00669 Bacterial flagellin N-terminal helical region AvCA_27700 PF12445 Flagellin protein AvCA_27700 PF00700 Bacterial flagellin C-terminal helical region AvCA_27710 PF00535 Glycosyl transferase family 2 AvCA_27750 PF08421 Putative zinc binding domain AvCA_27750 PF08484 C-methyltransferase C-terminal domain AvCA_27760 PF00908 dTDP-4-dehydrorhamnose 3,5-epimerase AvCA_27770 PF16363 GDP-mannose 4,6 dehydratase AvCA_27780 PF00483 Nucleotidyl transferase AvCA_27790 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain AvCA_27790 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain AvCA_27790 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain AvCA_27850 PF03646 FlaG protein AvCA_27860 PF01966 HD domain AvCA_27870 PF04539 Sigma-70 region 3 AvCA_27870 PF04542 Sigma-70 region 2 AvCA_27870 PF04545 Sigma-70, region 4 AvCA_27900 PF00448 SRP54-type protein, GTPase domain AvCA_27910 PF00771 FHIPEP family AvCA_27920 PF01312 FlhB HrpN YscU SpaS Family AvCA_27940 PF04344 Chemotaxis phosphatase, CheZ AvCA_27950 PF00072 Response regulator receiver domain AvCA_27960 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain AvCA_27960 PF00672 HAMP domain AvCA_27960 PF02203 Tar ligand binding domain homologue AvCA_27970 PF00672 HAMP domain AvCA_27970 PF02203 Tar ligand binding domain homologue AvCA_27970 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain AvCA_27980 PF00072 Response regulator receiver domain AvCA_27980 PF01339 CheB methylesterase AvCA_27990 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) AvCA_27990 PF00128 Alpha amylase, catalytic domain AvCA_27990 PF02806 Alpha amylase, C-terminal all-beta domain AvCA_28000 PF00128 Alpha amylase, catalytic domain AvCA_28000 PF16657 Maltogenic Amylase, C-terminal domain AvCA_28010 PF00128 Alpha amylase, catalytic domain AvCA_28010 PF11896 Domain of unknown function (DUF3416) AvCA_28020 PF02624 YcaO cyclodehydratase, ATP-ad Mg2+-binding AvCA_28020 PF18381 YcaO cyclodehydratase C-terminal domain AvCA_28070 PF00266 Aminotransferase class-V AvCA_28080 PF13533 Biotin-lipoyl like AvCA_28110 PF01027 Inhibitor of apoptosis-promoting Bax1 AvCA_28120 PF02635 DsrE/DsrF-like family AvCA_28130 PF02635 DsrE/DsrF-like family AvCA_28150 PF04358 DsrC like protein AvCA_28160 PF00591 Glycosyl transferase family, a/b domain AvCA_28160 PF02885 Glycosyl transferase family, helical bundle domain AvCA_28170 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases AvCA_28170 PF14824 Sirohaem biosynthesis protein central AvCA_28170 PF10414 Sirohaem synthase dimerisation region AvCA_28180 PF02403 Seryl-tRNA synthetase N-terminal domain AvCA_28180 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) AvCA_28190 PF02537 CrcB-like protein, Camphor Resistance (CrcB) AvCA_28200 PF12002 MgsA AAA+ ATPase C terminal AvCA_28200 PF00004 ATPase family associated with various cellular activities (AAA) AvCA_28200 PF16193 AAA C-terminal domain AvCA_28210 PF03548 Outer membrane lipoprotein carrier protein LolA AvCA_28220 PF09397 Ftsk gamma domain AvCA_28220 PF13491 4TM region of DNA translocase FtsK/SpoIIIE AvCA_28220 PF01580 FtsK/SpoIIIE family AvCA_28220 PF17854 FtsK alpha domain AvCA_28230 PF07992 Pyridine nucleotide-disulphide oxidoreductase AvCA_28240 PF03588 Leucyl/phenylalanyl-tRNA protein transferase AvCA_28250 PF04376 Arginine-tRNA-protein transferase, N terminus AvCA_28250 PF04377 Arginine-tRNA-protein transferase, C terminus AvCA_28260 PF01176 Translation initiation factor 1A / IF-1 AvCA_28270 PF10431 C-terminal, D2-small domain, of ClpB protein AvCA_28270 PF02861 Clp amino terminal domain, pathogenicity island component AvCA_28270 PF17871 AAA lid domain AvCA_28270 PF00004 ATPase family associated with various cellular activities (AAA) AvCA_28270 PF07724 AAA domain (Cdc48 subfamily) AvCA_28280 PF02617 ATP-dependent Clp protease adaptor protein ClpS AvCA_28290 PF00313 'Cold-shock' DNA-binding domain AvCA_28310 PF03971 Monomeric isocitrate dehydrogenase AvCA_28350 PF00293 NUDIX domain AvCA_28370 PF04356 Protein of unknown function (DUF489) AvCA_28380 PF00206 Lyase AvCA_28380 PF08328 Adenylosuccinate lyase C-terminal AvCA_28390 PF08007 Cupin superfamily protein AvCA_28400 PF13673 Acetyltransferase (GNAT) domain AvCA_28420 PF00463 Isocitrate lyase family AvCA_28440 PF00507 NADH-ubiquinone/plastoquinone oxidoreductase, chain 3 AvCA_28450 PF01058 NADH ubiquinone oxidoreductase, 20 Kd subunit AvCA_28460 PF00329 Respiratory-chain NADH dehydrogenase, 30 Kd subunit AvCA_28460 PF00346 Respiratory-chain NADH dehydrogenase, 49 Kd subunit AvCA_28480 PF10589 NADH-ubiquinone oxidoreductase-F iron-sulfur binding region AvCA_28480 PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit AvCA_28490 PF00384 Molybdopterin oxidoreductase AvCA_28490 PF04879 Molybdopterin oxidoreductase Fe4S4 domain AvCA_28490 PF10588 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region AvCA_28500 PF00146 NADH dehydrogenase AvCA_28510 PF12838 4Fe-4S dicluster domain AvCA_28520 PF00499 NADH-ubiquinone/plastoquinone oxidoreductase chain 6 AvCA_28530 PF00420 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L AvCA_28540 PF00361 Proton-conducting membrane transporter AvCA_28540 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus AvCA_28550 PF00361 Proton-conducting membrane transporter AvCA_28560 PF00361 Proton-conducting membrane transporter AvCA_28570 PF08918 PhoQ Sensor AvCA_28570 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AvCA_28580 PF00486 Transcriptional regulatory protein, C terminal AvCA_28580 PF00072 Response regulator receiver domain AvCA_28590 PF03413 Peptidase propeptide and YPEB domain AvCA_28600 PF01242 6-pyruvoyl tetrahydropterin synthase AvCA_28610 PF01464 Transglycosylase SLT domain AvCA_28620 PF08334 Type II secretion system (T2SS), protein G AvCA_28620 PF07963 Prokaryotic N-terminal methylation motif AvCA_28630 PF00482 Type II secretion system (T2SS), protein F AvCA_28640 PF00563 EAL domain AvCA_28640 PF00990 Diguanylate cyclase, GGDEF domain AvCA_28640 PF03707 Bacterial signalling protein N terminal repeat AvCA_28660 PF02586 SOS response associated peptidase (SRAP) AvCA_28710 PF00005 ABC transporter AvCA_28710 PF12848 ABC transporter AvCA_28720 PF02673 Bacitracin resistance protein BacA AvCA_28760 PF01521 Iron-sulphur cluster biosynthesis AvCA_28760 PF01106 NifU-like domain AvCA_28780 PF02321 Outer membrane efflux protein AvCA_28790 PF00873 AcrB/AcrD/AcrF family AvCA_28810 PF00873 AcrB/AcrD/AcrF family AvCA_28820 PF13533 Biotin-lipoyl like AvCA_28840 PF01235 Sodium:alanine symporter family AvCA_28850 PF04357 TamB, inner membrane protein subunit of TAM complex AvCA_28860 PF17243 POTRA domain TamA domain 1 AvCA_28860 PF07244 Surface antigen variable number repeat AvCA_28860 PF01103 Surface antigen AvCA_28880 PF03372 Endonuclease/Exonuclease/phosphatase family AvCA_28960 PF00106 short chain dehydrogenase AvCA_28990 PF07690 Major Facilitator Superfamily AvCA_29000 PF02954 Bacterial regulatory protein, Fis family AvCA_29000 PF00072 Response regulator receiver domain AvCA_29000 PF00158 Sigma-54 interaction domain AvCA_29010 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AvCA_29010 PF00512 His Kinase A (phospho-acceptor) domain AvCA_29030 PF07479 NAD-dependent glycerol-3-phosphate dehydrogenase C-terminus AvCA_29030 PF01210 NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus AvCA_29050 PF07977 FabA-like domain AvCA_29060 PF02801 Beta-ketoacyl synthase, C-terminal domain AvCA_29060 PF00109 Beta-ketoacyl synthase, N-terminal domain AvCA_29080 PF08334 Type II secretion system (T2SS), protein G AvCA_29080 PF07963 Prokaryotic N-terminal methylation motif AvCA_29090 PF08334 Type II secretion system (T2SS), protein G AvCA_29090 PF07963 Prokaryotic N-terminal methylation motif AvCA_29100 PF00263 Bacterial type II and III secretion system protein AvCA_29100 PF03958 Bacterial type II/III secretion system short domain AvCA_29150 PF00437 Type II/IV secretion system protein AvCA_29160 PF00486 Transcriptional regulatory protein, C terminal AvCA_29160 PF00072 Response regulator receiver domain AvCA_29190 PF02824 TGS domain AvCA_29190 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain AvCA_29190 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) AvCA_29190 PF03129 Anticodon binding domain AvCA_29210 PF02649 Type I GTP cyclohydrolase folE2 AvCA_29220 PF01520 N-acetylmuramoyl-L-alanine amidase AvCA_29240 PF02607 B12 binding domain AvCA_29240 PF02965 Vitamin B12 dependent methionine synthase, activation domain AvCA_29240 PF02574 Homocysteine S-methyltransferase AvCA_29240 PF02310 B12 binding domain AvCA_29240 PF00809 Pterin binding enzyme AvCA_29280 PF01547 Bacterial extracellular solute-binding protein AvCA_29290 PF01627 Hpt domain AvCA_29290 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AvCA_29290 PF00512 His Kinase A (phospho-acceptor) domain AvCA_29290 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) AvCA_29290 PF00072 Response regulator receiver domain AvCA_29290 PF00672 HAMP domain AvCA_29300 PF00072 Response regulator receiver domain AvCA_29320 PF03928 Haem-degrading AvCA_29330 PF03960 ArsC family AvCA_29340 PF02535 ZIP Zinc transporter AvCA_29350 PF04055 Radical SAM superfamily AvCA_29400 PF00528 Binding-protein-dependent transport system inner membrane component AvCA_29410 PF00005 ABC transporter AvCA_29450 PF00698 Acyl transferase domain AvCA_29500 PF12704 MacB-like periplasmic core domain AvCA_29500 PF02687 FtsX-like permease family AvCA_29510 PF00005 ABC transporter AvCA_29530 PF02797 Chalcone and stilbene synthases, C-terminal domain AvCA_29530 PF00195 Chalcone and stilbene synthases, N-terminal domain AvCA_29550 PF02797 Chalcone and stilbene synthases, C-terminal domain AvCA_29550 PF00195 Chalcone and stilbene synthases, N-terminal domain AvCA_29560 PF08659 KR domain AvCA_29560 PF16197 Ketoacyl-synthetase C-terminal extension AvCA_29560 PF00550 Phosphopantetheine attachment site AvCA_29560 PF00109 Beta-ketoacyl synthase, N-terminal domain AvCA_29560 PF02801 Beta-ketoacyl synthase, C-terminal domain AvCA_29560 PF14765 Polyketide synthase dehydratase AvCA_29560 PF00698 Acyl transferase domain AvCA_29580 PF03709 Orn/Lys/Arg decarboxylase, N-terminal domain AvCA_29580 PF01276 Orn/Lys/Arg decarboxylase, major domain AvCA_29580 PF03711 Orn/Lys/Arg decarboxylase, C-terminal domain AvCA_29590 PF00929 Exonuclease AvCA_29600 PF00075 RNase H AvCA_29620 PF16123 Hydroxyacylglutathione hydrolase C-terminus AvCA_29620 PF00753 Metallo-beta-lactamase superfamily AvCA_29630 PF01476 LysM domain AvCA_29630 PF01464 Transglycosylase SLT domain AvCA_29640 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle AvCA_29650 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle AvCA_29660 PF00528 Binding-protein-dependent transport system inner membrane component AvCA_29670 PF12911 N-terminal TM domain of oligopeptide transport permease C AvCA_29670 PF00528 Binding-protein-dependent transport system inner membrane component AvCA_29680 PF08352 Oligopeptide/dipeptide transporter, C-terminal region AvCA_29680 PF00005 ABC transporter AvCA_29700 PF00860 Permease family AvCA_29730 PF00549 CoA-ligase AvCA_29730 PF02629 CoA binding domain AvCA_29740 PF08442 ATP-grasp domain AvCA_29740 PF00549 CoA-ligase AvCA_29750 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain AvCA_29750 PF07992 Pyridine nucleotide-disulphide oxidoreductase AvCA_29760 PF02817 e3 binding domain AvCA_29760 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) AvCA_29760 PF00364 Biotin-requiring enzyme AvCA_29770 PF16078 2-oxoglutarate dehydrogenase N-terminus AvCA_29770 PF16870 2-oxoglutarate dehydrogenase C-terminal AvCA_29770 PF00676 Dehydrogenase E1 component AvCA_29770 PF02779 Transketolase, pyrimidine binding domain AvCA_29780 PF13085 2Fe-2S iron-sulfur cluster binding domain AvCA_29790 PF00890 FAD binding domain AvCA_29790 PF02910 Fumarate reductase flavoprotein C-term AvCA_29800 PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit AvCA_29810 PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit AvCA_29820 PF00285 Citrate synthase, C-terminal domain AvCA_29830 PF03692 Putative zinc- or iron-chelating domain AvCA_29860 PF06865 Pyrimidine/purine nucleoside phosphorylase AvCA_29870 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain AvCA_29870 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain AvCA_29870 PF11890 Domain of unknown function (DUF3410) AvCA_29880 PF01554 MatE AvCA_29890 PF01451 Low molecular weight phosphotyrosine protein phosphatase AvCA_29900 PF13614 AAA domain AvCA_29900 PF13807 G-rich domain on putative tyrosine kinase AvCA_29900 PF02706 Chain length determinant protein AvCA_29910 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain AvCA_29910 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain AvCA_29910 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain AvCA_29920 PF01370 NAD dependent epimerase/dehydratase family AvCA_29930 PF00664 ABC transporter transmembrane region AvCA_29930 PF00005 ABC transporter AvCA_29940 PF00156 Phosphoribosyl transferase domain AvCA_29960 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain AvCA_29960 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain AvCA_29960 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain AvCA_29970 PF00535 Glycosyl transferase family 2 AvCA_29980 PF00535 Glycosyl transferase family 2 AvCA_29990 PF13439 Glycosyltransferase Family 4 AvCA_29990 PF00534 Glycosyl transferases group 1 AvCA_30000 PF00534 Glycosyl transferases group 1 AvCA_30000 PF13439 Glycosyltransferase Family 4 AvCA_30010 PF13439 Glycosyltransferase Family 4 AvCA_30010 PF00534 Glycosyl transferases group 1 AvCA_30040 PF00534 Glycosyl transferases group 1 AvCA_30040 PF13477 Glycosyl transferase 4-like AvCA_30050 PF02397 Bacterial sugar transferase AvCA_30070 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family AvCA_30080 PF02719 Polysaccharide biosynthesis protein AvCA_30100 PF00535 Glycosyl transferase family 2 AvCA_30120 PF00535 Glycosyl transferase family 2 AvCA_30120 PF01501 Glycosyl transferase family 8 AvCA_30130 PF10531 SLBB domain AvCA_30130 PF18412 Outer-membrane lipoprotein Wza C-terminal domain AvCA_30130 PF02563 Polysaccharide biosynthesis/export protein AvCA_30140 PF00501 AMP-binding enzyme AvCA_30140 PF13193 AMP-binding enzyme C-terminal domain AvCA_30160 PF01575 MaoC like domain AvCA_30170 PF07969 Amidohydrolase family AvCA_30210 PF01408 Oxidoreductase family, NAD-binding Rossmann fold AvCA_30210 PF02894 Oxidoreductase family, C-terminal alpha/beta domain AvCA_30230 PF01548 Transposase AvCA_30230 PF02371 Transposase IS116/IS110/IS902 family AvCA_30280 PF18337 RapA N-terminal Tudor like domain AvCA_30280 PF00271 Helicase conserved C-terminal domain AvCA_30280 PF12137 RNA polymerase recycling family C-terminal AvCA_30280 PF00176 SNF2 family N-terminal domain AvCA_30280 PF18339 RapA N-terminal Tudor like domain 1 AvCA_30290 PF01653 NAD-dependent DNA ligase adenylation domain AvCA_30290 PF12826 Helix-hairpin-helix motif AvCA_30290 PF03119 NAD-dependent DNA ligase C4 zinc finger domain AvCA_30290 PF03120 NAD-dependent DNA ligase OB-fold domain AvCA_30290 PF00533 BRCA1 C Terminus (BRCT) domain AvCA_30300 PF04354 ZipA, C-terminal FtsZ-binding domain AvCA_30320 PF02463 RecF/RecN/SMC N terminal domain AvCA_30320 PF06470 SMC proteins Flexible Hinge Domain AvCA_30330 PF04055 Radical SAM superfamily AvCA_30330 PF06463 Molybdenum Cofactor Synthesis C AvCA_30350 PF07885 Ion channel AvCA_30350 PF02254 TrkA-N domain AvCA_30380 PF03918 Cytochrome C biogenesis protein AvCA_30390 PF08534 Redoxin AvCA_30400 PF01578 Cytochrome C assembly protein AvCA_30400 PF16327 Cytochrome c-type biogenesis protein CcmF C-terminal AvCA_30410 PF03100 CcmE AvCA_30420 PF04995 Heme exporter protein D (CcmD) AvCA_30430 PF01578 Cytochrome C assembly protein AvCA_30440 PF03379 CcmB protein AvCA_30450 PF00005 ABC transporter AvCA_30460 PF10609 NUBPL iron-transfer P-loop NTPase AvCA_30470 PF00080 Copper/zinc superoxide dismutase (SODC) AvCA_30480 PF00005 ABC transporter AvCA_30490 PF00528 Binding-protein-dependent transport system inner membrane component AvCA_30500 PF00296 Luciferase-like monooxygenase AvCA_30510 PF09084 NMT1/THI5 like AvCA_30520 PF03358 NADPH-dependent FMN reductase AvCA_30530 PF10417 C-terminal domain of 1-Cys peroxiredoxin AvCA_30530 PF00578 AhpC/TSA family AvCA_30550 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain AvCA_30550 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain AvCA_30560 PF00111 2Fe-2S iron-sulfur cluster binding domain AvCA_30570 PF00682 HMGL-like AvCA_30570 PF07836 DmpG-like communication domain AvCA_30580 PF09290 Prokaryotic acetaldehyde dehydrogenase, dimerisation AvCA_30580 PF01118 Semialdehyde dehydrogenase, NAD binding domain AvCA_30590 PF01361 Tautomerase enzyme AvCA_30610 PF01557 Fumarylacetoacetate (FAA) hydrolase family AvCA_30620 PF00171 Aldehyde dehydrogenase family AvCA_30640 PF13657 HipA N-terminal domain AvCA_30640 PF07804 HipA-like C-terminal domain AvCA_30670 PF03960 ArsC family AvCA_30680 PF01758 Sodium Bile acid symporter family AvCA_30710 PF00175 Oxidoreductase NAD-binding domain AvCA_30710 PF00111 2Fe-2S iron-sulfur cluster binding domain AvCA_30710 PF00970 Oxidoreductase FAD-binding domain AvCA_30730 PF02332 Methane/Phenol/Toluene Hydroxylase AvCA_30730 PF04945 YHS domain AvCA_30740 PF02406 MmoB/DmpM family AvCA_30750 PF02332 Methane/Phenol/Toluene Hydroxylase AvCA_30760 PF06099 Phenol hydroxylase subunit AvCA_30770 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily AvCA_30810 PF02830 V4R domain AvCA_30810 PF02954 Bacterial regulatory protein, Fis family AvCA_30810 PF06505 Activator of aromatic catabolism AvCA_30810 PF00158 Sigma-54 interaction domain AvCA_30850 PF03466 LysR substrate binding domain AvCA_30850 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AvCA_30860 PF00593 TonB dependent receptor AvCA_30860 PF07715 TonB-dependent Receptor Plug Domain AvCA_30890 PF00106 short chain dehydrogenase AvCA_30900 PF00528 Binding-protein-dependent transport system inner membrane component AvCA_30910 PF00005 ABC transporter AvCA_30930 PF02668 Taurine catabolism dioxygenase TauD, TfdA family AvCA_30960 PF00581 Rhodanese-like domain AvCA_30970 PF05995 Cysteine dioxygenase type I AvCA_30980 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AvCA_30980 PF03466 LysR substrate binding domain AvCA_30990 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AvCA_30990 PF03466 LysR substrate binding domain AvCA_31030 PF03466 LysR substrate binding domain AvCA_31030 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AvCA_31100 PF02771 Acyl-CoA dehydrogenase, N-terminal domain AvCA_31100 PF08028 Acyl-CoA dehydrogenase, C-terminal domain AvCA_31100 PF02770 Acyl-CoA dehydrogenase, middle domain AvCA_31140 PF00672 HAMP domain AvCA_31140 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AvCA_31140 PF00512 His Kinase A (phospho-acceptor) domain AvCA_31140 PF16527 Two-component sensor protein CpxA, periplasmic domain AvCA_31150 PF00072 Response regulator receiver domain AvCA_31150 PF00486 Transcriptional regulatory protein, C terminal AvCA_31180 PF03573 outer membrane porin, OprD family AvCA_31190 PF05683 Fumarase C-terminus AvCA_31200 PF05681 Fumarate hydratase (Fumerase) AvCA_31210 PF00375 Sodium:dicarboxylate symporter family AvCA_31220 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AvCA_31220 PF03466 LysR substrate binding domain AvCA_31240 PF07690 Major Facilitator Superfamily AvCA_31250 PF02900 Catalytic LigB subunit of aromatic ring-opening dioxygenase AvCA_31250 PF07746 Aromatic-ring-opening dioxygenase LigAB, LigA subunit AvCA_31260 PF03466 LysR substrate binding domain AvCA_31260 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AvCA_31270 PF02585 GlcNAc-PI de-N-acetylase AvCA_31280 PF03737 Aldolase/RraA AvCA_31290 PF04303 PrpF protein AvCA_31300 PF03573 outer membrane porin, OprD family AvCA_31330 PF00296 Luciferase-like monooxygenase AvCA_31340 PF00296 Luciferase-like monooxygenase AvCA_31350 PF02771 Acyl-CoA dehydrogenase, N-terminal domain AvCA_31350 PF08028 Acyl-CoA dehydrogenase, C-terminal domain AvCA_31350 PF02770 Acyl-CoA dehydrogenase, middle domain AvCA_31370 PF00596 Class II Aldolase and Adducin N-terminal domain AvCA_31380 PF09084 NMT1/THI5 like AvCA_31400 PF09084 NMT1/THI5 like AvCA_31410 PF13426 PAS domain AvCA_31410 PF02954 Bacterial regulatory protein, Fis family AvCA_31410 PF00158 Sigma-54 interaction domain AvCA_31420 PF01408 Oxidoreductase family, NAD-binding Rossmann fold AvCA_31420 PF02894 Oxidoreductase family, C-terminal alpha/beta domain AvCA_31430 PF01261 Xylose isomerase-like TIM barrel AvCA_31440 PF00857 Isochorismatase family AvCA_31480 PF08028 Acyl-CoA dehydrogenase, C-terminal domain AvCA_31480 PF02771 Acyl-CoA dehydrogenase, N-terminal domain AvCA_31490 PF08028 Acyl-CoA dehydrogenase, C-terminal domain AvCA_31490 PF02771 Acyl-CoA dehydrogenase, N-terminal domain AvCA_31500 PF00296 Luciferase-like monooxygenase AvCA_31510 PF03180 NLPA lipoprotein AvCA_31520 PF09383 NIL domain AvCA_31520 PF00005 ABC transporter AvCA_31530 PF00528 Binding-protein-dependent transport system inner membrane component AvCA_31550 PF01695 IstB-like ATP binding protein AvCA_31560 PF02796 Helix-turn-helix domain of resolvase AvCA_31560 PF00665 Integrase core domain AvCA_31570 PF09827 CRISPR associated protein Cas2 AvCA_31580 PF01867 CRISPR associated protein Cas1 AvCA_31620 PF09704 CRISPR-associated protein (Cas_Cas5) AvCA_31670 PF03573 outer membrane porin, OprD family AvCA_31680 PF09084 NMT1/THI5 like AvCA_31690 PF00158 Sigma-54 interaction domain AvCA_31730 PF00528 Binding-protein-dependent transport system inner membrane component AvCA_31740 PF00528 Binding-protein-dependent transport system inner membrane component AvCA_31750 PF12857 TOBE-like domain AvCA_31750 PF00005 ABC transporter AvCA_31760 PF01062 Bestrophin, RFP-TM, chloride channel AvCA_31800 PF00999 Sodium/hydrogen exchanger family AvCA_31810 PF08787 Alginate lyase AvCA_31840 PF08669 Glycine cleavage T-protein C-terminal barrel domain AvCA_31840 PF01571 Aminomethyltransferase folate-binding domain AvCA_31860 PF02604 Antitoxin Phd_YefM, type II toxin-antitoxin system AvCA_31910 PF09907 HigB_toxin, RelE-like toxic component of a toxin-antitoxin system AvCA_31970 PF06296 RelE toxin of RelE / RelB toxin-antitoxin system AvCA_32100 PF01609 Transposase DDE domain AvCA_32100 PF13006 Insertion element 4 transposase N-terminal AvCA_32110 PF00258 Flavodoxin AvCA_32170 PF01613 Flavin reductase like domain AvCA_32180 PF08028 Acyl-CoA dehydrogenase, C-terminal domain AvCA_32190 PF01609 Transposase DDE domain AvCA_32190 PF05598 Transposase domain (DUF772) AvCA_32210 PF01047 MarR family AvCA_32220 PF00171 Aldehyde dehydrogenase family AvCA_32250 PF07690 Major Facilitator Superfamily AvCA_32340 PF12146 Serine aminopeptidase, S33 AvCA_32370 PF07690 Major Facilitator Superfamily AvCA_32390 PF00107 Zinc-binding dehydrogenase AvCA_32390 PF08240 Alcohol dehydrogenase GroES-like domain AvCA_32460 PF12833 Helix-turn-helix domain AvCA_32460 PF06719 AraC-type transcriptional regulator N-terminus AvCA_32470 PF03466 LysR substrate binding domain AvCA_32470 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AvCA_32480 PF03466 LysR substrate binding domain AvCA_32480 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AvCA_32500 PF00248 Aldo/keto reductase family AvCA_32510 PF02525 Flavodoxin-like fold AvCA_32520 PF00106 short chain dehydrogenase AvCA_32530 PF00248 Aldo/keto reductase family AvCA_32550 PF00248 Aldo/keto reductase family AvCA_32660 PF07690 Major Facilitator Superfamily AvCA_32690 PF01207 Dihydrouridine synthase (Dus) AvCA_32700 PF00923 Transaldolase/Fructose-6-phosphate aldolase AvCA_32720 PF00072 Response regulator receiver domain AvCA_32730 PF04333 MlaA lipoprotein AvCA_32750 PF00211 Adenylate and Guanylate cyclase catalytic domain AvCA_32760 PF13439 Glycosyltransferase Family 4 AvCA_32760 PF00534 Glycosyl transferases group 1 AvCA_32800 PF09382 RQC domain AvCA_32800 PF16124 RecQ zinc-binding AvCA_32800 PF00570 HRDC domain AvCA_32800 PF00271 Helicase conserved C-terminal domain AvCA_32800 PF00270 DEAD/DEAH box helicase AvCA_32820 PF04304 Protein of unknown function (DUF454) AvCA_32850 PF00291 Pyridoxal-phosphate dependent enzyme AvCA_32860 PF07724 AAA domain (Cdc48 subfamily) AvCA_32860 PF10431 C-terminal, D2-small domain, of ClpB protein AvCA_32860 PF17871 AAA lid domain AvCA_32860 PF00004 ATPase family associated with various cellular activities (AAA) AvCA_32860 PF02861 Clp amino terminal domain, pathogenicity island component AvCA_32880 PF13230 Glutamine amidotransferases class-II AvCA_32900 PF02897 Prolyl oligopeptidase, N-terminal beta-propeller domain AvCA_32900 PF00326 Prolyl oligopeptidase family AvCA_32910 PF03631 Virulence factor BrkB AvCA_32930 PF03692 Putative zinc- or iron-chelating domain AvCA_32960 PF05166 YcgL domain AvCA_32970 PF01612 3'-5' exonuclease AvCA_32970 PF00570 HRDC domain AvCA_32980 PF00581 Rhodanese-like domain AvCA_33030 PF02654 Cobalamin-5-phosphate synthase AvCA_33040 PF00300 Histidine phosphatase superfamily (branch 1) AvCA_33050 PF02277 Phosphoribosyltransferase AvCA_33060 PF02283 Cobinamide kinase / cobinamide phosphate guanyltransferase AvCA_33080 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain AvCA_33080 PF07685 CobB/CobQ-like glutamine amidotransferase domain AvCA_33090 PF00155 Aminotransferase class I and II AvCA_33100 PF03186 CobD/Cbib protein AvCA_33100 PF17113 Regulatory signalling modulator protein AmpE AvCA_33110 PF00881 Nitroreductase family AvCA_33120 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain AvCA_33120 PF07685 CobB/CobQ-like glutamine amidotransferase domain AvCA_33130 PF07715 TonB-dependent Receptor Plug Domain AvCA_33130 PF00593 TonB dependent receptor AvCA_33150 PF02146 Sir2 family AvCA_33160 PF00117 Glutamine amidotransferase class-I AvCA_33160 PF00988 Carbamoyl-phosphate synthase small chain, CPSase domain AvCA_33170 PF00877 NlpC/P60 family AvCA_33180 PF00877 NlpC/P60 family AvCA_33190 PF02146 Sir2 family AvCA_33210 PF00793 DAHP synthetase I family AvCA_33230 PF01171 PP-loop family AvCA_33240 PF04893 Yip1 domain AvCA_33250 PF10263 SprT-like family AvCA_33260 PF00375 Sodium:dicarboxylate symporter family AvCA_33270 PF01738 Dienelactone hydrolase family AvCA_33280 PF17837 4'-phosphopantetheinyl transferase N-terminal domain AvCA_33280 PF01648 4'-phosphopantetheinyl transferase superfamily AvCA_33290 PF03477 ATP cone domain AvCA_33290 PF00317 Ribonucleotide reductase, all-alpha domain AvCA_33290 PF02867 Ribonucleotide reductase, barrel domain AvCA_33300 PF00268 Ribonucleotide reductase, small chain AvCA_33320 PF13340 Putative transposase of IS4/5 family (DUF4096) AvCA_33370 PF13649 Methyltransferase domain AvCA_33430 PF03459 TOBE domain AvCA_33430 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AvCA_33440 PF01590 GAF domain AvCA_33440 PF02954 Bacterial regulatory protein, Fis family AvCA_33440 PF00158 Sigma-54 interaction domain AvCA_33470 PF03741 Integral membrane protein TerC family AvCA_33500 PF10503 Esterase PHB depolymerase AvCA_33540 PF00353 RTX calcium-binding nonapeptide repeat (4 copies) AvCA_33540 PF13229 Right handed beta helix region AvCA_33540 PF12708 Pectate lyase superfamily protein AvCA_33550 PF00665 Integrase core domain AvCA_33610 PF02264 LamB porin AvCA_33640 PF00034 Cytochrome c AvCA_33640 PF13442 Cytochrome C oxidase, cbb3-type, subunit III AvCA_33650 PF00732 GMC oxidoreductase AvCA_33650 PF05199 GMC oxidoreductase AvCA_33660 PF13618 Gluconate 2-dehydrogenase subunit 3 AvCA_33670 PF00356 Bacterial regulatory proteins, lacI family AvCA_33680 PF01261 Xylose isomerase-like TIM barrel AvCA_33690 PF00083 Sugar (and other) transporter AvCA_33700 PF01261 Xylose isomerase-like TIM barrel AvCA_33710 PF00353 RTX calcium-binding nonapeptide repeat (4 copies) AvCA_33710 PF12708 Pectate lyase superfamily protein AvCA_33710 PF13229 Right handed beta helix region AvCA_33740 PF01527 Transposase AvCA_33750 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AvCA_33750 PF03466 LysR substrate binding domain AvCA_33780 PF02667 Short chain fatty acid transporter AvCA_33790 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain AvCA_33790 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain AvCA_33820 PF00245 Alkaline phosphatase AvCA_33840 PF00107 Zinc-binding dehydrogenase AvCA_33840 PF08240 Alcohol dehydrogenase GroES-like domain AvCA_33850 PF03466 LysR substrate binding domain AvCA_33850 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AvCA_33860 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion AvCA_33860 PF00529 HlyD membrane-fusion protein of T1SS AvCA_33870 PF00873 AcrB/AcrD/AcrF family AvCA_33890 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase AvCA_33890 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase AvCA_33900 PF00248 Aldo/keto reductase family AvCA_33920 PF00356 Bacterial regulatory proteins, lacI family AvCA_34040 PF03573 outer membrane porin, OprD family AvCA_34050 PF01694 Rhomboid family AvCA_34050 PF12122 Cytoplasmic N-terminal domain of rhomboid serine protease AvCA_34060 PF00149 Calcineurin-like phosphoesterase AvCA_34070 PF01513 ATP-NAD kinase AvCA_34140 PF01053 Cys/Met metabolism PLP-dependent enzyme AvCA_34150 PF00156 Phosphoribosyl transferase domain AvCA_34160 PF02674 Colicin V production protein AvCA_34180 PF08245 Mur ligase middle domain AvCA_34180 PF02875 Mur ligase family, glutamate ligase domain AvCA_34190 PF17848 Acetyl-coA carboxylase zinc finger domain AvCA_34190 PF01039 Carboxyl transferase domain AvCA_34210 PF00697 N-(5'phosphoribosyl)anthranilate (PRA) isomerase AvCA_34220 PF01416 tRNA pseudouridine synthase AvCA_34240 PF01118 Semialdehyde dehydrogenase, NAD binding domain AvCA_34240 PF02774 Semialdehyde dehydrogenase, dimerisation domain AvCA_34250 PF02774 Semialdehyde dehydrogenase, dimerisation domain AvCA_34250 PF01118 Semialdehyde dehydrogenase, NAD binding domain AvCA_34260 PF00180 Isocitrate/isopropylmalate dehydrogenase AvCA_34270 PF00694 Aconitase C-terminal domain AvCA_34280 PF00330 Aconitase family (aconitate hydratase) AvCA_34290 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AvCA_34300 PF00011 Hsp20/alpha crystallin family AvCA_34320 PF01207 Dihydrouridine synthase (Dus) AvCA_34340 PF01081 KDPG and KHG aldolase AvCA_34360 PF00072 Response regulator receiver domain AvCA_34360 PF00486 Transcriptional regulatory protein, C terminal AvCA_34370 PF13466 STAS domain AvCA_34380 PF00158 Sigma-54 interaction domain AvCA_34380 PF02954 Bacterial regulatory protein, Fis family AvCA_34380 PF00072 Response regulator receiver domain AvCA_34400 PF00120 Glutamine synthetase, catalytic domain AvCA_34420 PF01769 Divalent cation transporter AvCA_34420 PF03448 MgtE intracellular N domain AvCA_34420 PF00571 CBS domain AvCA_34440 PF02599 Global regulator protein family AvCA_34450 PF00696 Amino acid kinase family AvCA_34450 PF01842 ACT domain AvCA_34450 PF13840 ACT domain AvCA_34460 PF01411 tRNA synthetases class II (A) AvCA_34460 PF02272 DHHA1 domain AvCA_34460 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain AvCA_34480 PF04958 Arginine N-succinyltransferase beta subunit AvCA_34490 PF04958 Arginine N-succinyltransferase beta subunit AvCA_34500 PF00202 Aminotransferase class-III AvCA_34510 PF12833 Helix-turn-helix domain AvCA_34530 PF13193 AMP-binding enzyme C-terminal domain AvCA_34530 PF00501 AMP-binding enzyme AvCA_34530 PF16177 Acetyl-coenzyme A synthetase N-terminus AvCA_34550 PF01515 Phosphate acetyl/butaryl transferase AvCA_34550 PF07085 DRTGG domain AvCA_34560 PF00871 Acetokinase family AvCA_34570 PF03328 HpcH/HpaI aldolase/citrate lyase family AvCA_34650 PF00351 Biopterin-dependent aromatic amino acid hydroxylase AvCA_34660 PF01329 Pterin 4 alpha carbinolamine dehydratase AvCA_34680 PF00982 Glycosyltransferase family 20 AvCA_34680 PF05116 Sucrose-6F-phosphate phosphohydrolase AvCA_34690 PF00472 RF-1 domain AvCA_34750 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily AvCA_34810 PF10503 Esterase PHB depolymerase AvCA_34840 PF00664 ABC transporter transmembrane region AvCA_34840 PF00005 ABC transporter AvCA_34860 PF01722 BolA-like protein AvCA_34880 PF10415 Fumarase C C-terminus AvCA_34880 PF00206 Lyase AvCA_34890 PF03976 Polyphosphate kinase 2 (PPK2) AvCA_34920 PF03976 Polyphosphate kinase 2 (PPK2) AvCA_34940 PF01266 FAD dependent oxidoreductase AvCA_34940 PF05430 S-adenosyl-L-methionine-dependent methyltransferase AvCA_34950 PF01047 MarR family AvCA_34960 PF13537 Glutamine amidotransferase domain AvCA_34960 PF00733 Asparagine synthase AvCA_34980 PF05343 M42 glutamyl aminopeptidase AvCA_34990 PF00072 Response regulator receiver domain AvCA_34990 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AvCA_34990 PF00672 HAMP domain AvCA_34990 PF01627 Hpt domain AvCA_34990 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) AvCA_34990 PF00512 His Kinase A (phospho-acceptor) domain AvCA_35000 PF06794 Uncharacterised protein family (UPF0270) AvCA_35020 PF01595 Cyclin M transmembrane N-terminal domain AvCA_35020 PF03471 Transporter associated domain AvCA_35020 PF00571 CBS domain AvCA_35030 PF00474 Sodium:solute symporter family AvCA_35040 PF04341 Protein of unknown function, DUF485 AvCA_35090 PF04333 MlaA lipoprotein AvCA_35100 PF03279 Bacterial lipid A biosynthesis acyltransferase AvCA_35110 PF03775 Septum formation inhibitor MinC, C-terminal domain AvCA_35110 PF05209 Septum formation inhibitor MinC, N-terminal domain AvCA_35120 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain AvCA_35130 PF03776 Septum formation topological specificity factor MinE AvCA_35140 PF00849 RNA pseudouridylate synthase AvCA_35150 PF02127 Aminopeptidase I zinc metalloprotease (M18) AvCA_35160 PF14765 Polyketide synthase dehydratase AvCA_35160 PF00550 Phosphopantetheine attachment site AvCA_35160 PF02801 Beta-ketoacyl synthase, C-terminal domain AvCA_35160 PF16197 Ketoacyl-synthetase C-terminal extension AvCA_35160 PF00698 Acyl transferase domain AvCA_35160 PF08240 Alcohol dehydrogenase GroES-like domain AvCA_35160 PF00109 Beta-ketoacyl synthase, N-terminal domain AvCA_35160 PF08659 KR domain AvCA_35170 PF11818 C-terminal domain of tail specific protease (DUF3340) AvCA_35170 PF00595 PDZ domain AvCA_35170 PF03572 Peptidase family S41 AvCA_35170 PF17804 Tail specific protease N-terminal domain AvCA_35200 PF06803 Protein of unknown function (DUF1232) AvCA_35210 PF01346 Domain amino terminal to FKBP-type peptidyl-prolyl isomerase AvCA_35210 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase AvCA_35220 PF04381 Putative exonuclease, RdgC AvCA_35230 PF00512 His Kinase A (phospho-acceptor) domain AvCA_35230 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AvCA_35240 PF13194 Domain of unknown function (DUF4010) AvCA_35280 PF13617 YnbE-like lipoprotein AvCA_35300 PF13649 Methyltransferase domain AvCA_35320 PF01259 SAICAR synthetase AvCA_35330 PF06804 NlpB/DapX lipoprotein AvCA_35340 PF00701 Dihydrodipicolinate synthetase family AvCA_35360 PF00578 AhpC/TSA family AvCA_35370 PF01206 Sulfurtransferase TusA AvCA_35380 PF01435 Peptidase family M48 AvCA_35390 PF02445 Quinolinate synthetase A protein AvCA_35420 PF00939 Sodium:sulfate symporter transmembrane region AvCA_35460 PF02129 X-Pro dipeptidyl-peptidase (S15 family) AvCA_35470 PF00107 Zinc-binding dehydrogenase AvCA_35470 PF08240 Alcohol dehydrogenase GroES-like domain AvCA_35490 PF03466 LysR substrate binding domain AvCA_35490 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AvCA_35500 PF07690 Major Facilitator Superfamily AvCA_35510 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AvCA_35510 PF03466 LysR substrate binding domain AvCA_35520 PF06463 Molybdenum Cofactor Synthesis C AvCA_35520 PF04055 Radical SAM superfamily AvCA_35540 PF00111 2Fe-2S iron-sulfur cluster binding domain AvCA_35540 PF01799 [2Fe-2S] binding domain AvCA_35550 PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase AvCA_35590 PF02371 Transposase IS116/IS110/IS902 family AvCA_35590 PF01548 Transposase AvCA_35640 PF03524 Conjugal transfer protein AvCA_35660 PF04610 TrbL/VirB6 plasmid conjugal transfer protein AvCA_35690 PF03135 CagE, TrbE, VirB family, component of type IV transporter system AvCA_35710 PF04956 TrbC/VIRB2 family AvCA_35720 PF00437 Type II/IV secretion system protein AvCA_35740 PF02534 Type IV secretory system Conjugative DNA transfer AvCA_35760 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AvCA_35760 PF03466 LysR substrate binding domain AvCA_35770 PF07690 Major Facilitator Superfamily AvCA_35810 PF00440 Bacterial regulatory proteins, tetR family AvCA_35820 PF02525 Flavodoxin-like fold AvCA_35830 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AvCA_35830 PF03466 LysR substrate binding domain AvCA_35850 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AvCA_35850 PF03466 LysR substrate binding domain AvCA_35860 PF07690 Major Facilitator Superfamily AvCA_35870 PF07690 Major Facilitator Superfamily AvCA_35880 PF00144 Beta-lactamase AvCA_35890 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AvCA_35890 PF03466 LysR substrate binding domain AvCA_35900 PF07690 Major Facilitator Superfamily AvCA_35920 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AvCA_35920 PF03466 LysR substrate binding domain AvCA_35940 PF10502 Signal peptidase, peptidase S26 AvCA_35970 PF13614 AAA domain AvCA_36040 PF04002 RadC-like JAB domain AvCA_36050 PF00145 C-5 cytosine-specific DNA methylase AvCA_36080 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AvCA_36080 PF13426 PAS domain AvCA_36080 PF13188 PAS domain AvCA_36110 PF05973 Phage derived protein Gp49-like (DUF891) AvCA_36150 PF00155 Aminotransferase class I and II AvCA_36164 PF13340 Putative transposase of IS4/5 family (DUF4096) AvCA_36180 PF01850 PIN domain AvCA_36320 PF00069 Protein kinase domain AvCA_36320 PF07238 PilZ domain AvCA_36330 PF01527 Transposase AvCA_36410 PF03869 Arc-like DNA binding domain AvCA_36460 PF13276 HTH-like domain AvCA_36460 PF00665 Integrase core domain AvCA_36460 PF13333 Integrase core domain AvCA_36470 PF01695 IstB-like ATP binding protein AvCA_36480 PF00665 Integrase core domain AvCA_36480 PF02796 Helix-turn-helix domain of resolvase AvCA_36490 PF13333 Integrase core domain AvCA_36490 PF13276 HTH-like domain AvCA_36490 PF00665 Integrase core domain AvCA_36590 PF00589 Phage integrase family AvCA_36600 PF06508 Queuosine biosynthesis protein QueC AvCA_36610 PF04055 Radical SAM superfamily AvCA_36620 PF13525 Outer membrane lipoprotein AvCA_36620 PF16331 TolA binding protein trimerisation AvCA_36630 PF00691 OmpA family AvCA_36640 PF07676 WD40-like Beta Propeller Repeat AvCA_36640 PF04052 TolB amino-terminal domain AvCA_36660 PF02472 Biopolymer transport protein ExbD/TolR AvCA_36670 PF01618 MotA/TolQ/ExbB proton channel family AvCA_36680 PF03061 Thioesterase superfamily AvCA_36690 PF05496 Holliday junction DNA helicase RuvB P-loop domain AvCA_36690 PF17864 RuvB AAA lid domain AvCA_36690 PF05491 RuvB C-terminal winged helix domain AvCA_36700 PF07499 RuvA, C-terminal domain AvCA_36700 PF01330 RuvA N terminal domain AvCA_36710 PF02075 Crossover junction endodeoxyribonuclease RuvC AvCA_36720 PF01709 Transcriptional regulator AvCA_36730 PF01336 OB-fold nucleic acid binding domain AvCA_36730 PF00152 tRNA synthetases class II (D, K and N) AvCA_36730 PF02938 GAD domain AvCA_36750 PF03129 Anticodon binding domain AvCA_36750 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) AvCA_36750 PF04073 Aminoacyl-tRNA editing domain AvCA_36780 PF00708 Acylphosphatase AvCA_36790 PF00578 AhpC/TSA family AvCA_36810 PF03631 Virulence factor BrkB AvCA_36820 PF03960 ArsC family AvCA_36830 PF03358 NADPH-dependent FMN reductase AvCA_36850 PF00308 Bacterial dnaA protein AvCA_36860 PF01594 AI-2E family transporter AvCA_36890 PF00586 AIR synthase related protein, N-terminal domain AvCA_36890 PF02769 AIR synthase related protein, C-terminal domain AvCA_36900 PF00551 Formyl transferase AvCA_36920 PF04221 RelB antitoxin AvCA_36940 PF09831 Uncharacterized protein conserved in bacteria (DUF2058) AvCA_36950 PF03819 MazG nucleotide pyrophosphohydrolase domain AvCA_36990 PF00756 Putative esterase AvCA_37000 PF10119 Predicted methyltransferase regulatory domain AvCA_37000 PF13847 Methyltransferase domain AvCA_37010 PF07715 TonB-dependent Receptor Plug Domain AvCA_37010 PF00593 TonB dependent receptor AvCA_37020 PF07715 TonB-dependent Receptor Plug Domain AvCA_37020 PF00593 TonB dependent receptor AvCA_37040 PF16750 Sensor domain of 2-component histidine kinase AvCA_37040 PF00512 His Kinase A (phospho-acceptor) domain AvCA_37040 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AvCA_37040 PF00672 HAMP domain AvCA_37050 PF00072 Response regulator receiver domain AvCA_37050 PF00486 Transcriptional regulatory protein, C terminal AvCA_37060 PF02824 TGS domain AvCA_37060 PF13291 ACT domain AvCA_37060 PF04607 Region found in RelA / SpoT proteins AvCA_37070 PF05958 tRNA (Uracil-5-)-methyltransferase AvCA_37070 PF01938 TRAM domain AvCA_37080 PF00291 Pyridoxal-phosphate dependent enzyme AvCA_37090 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) AvCA_37090 PF00072 Response regulator receiver domain AvCA_37090 PF01627 Hpt domain AvCA_37090 PF00512 His Kinase A (phospho-acceptor) domain AvCA_37090 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AvCA_37090 PF00672 HAMP domain AvCA_37100 PF00817 impB/mucB/samB family AvCA_37100 PF11798 IMS family HHH motif AvCA_37230 PF10548 P22AR C-terminal domain AvCA_37230 PF08346 AntA/AntB antirepressor AvCA_37400 PF17482 Phage tail sheath C-terminal domain AvCA_37400 PF04984 Phage tail sheath protein subtilisin-like domain AvCA_37650 PF18693 TRAM domain AvCA_37650 PF00919 Uncharacterized protein family UPF0004 AvCA_37650 PF04055 Radical SAM superfamily AvCA_37680 PF04168 A predicted alpha-helical domain with a conserved ER motif. AvCA_37680 PF14403 Circularly permuted ATP-grasp type 2 AvCA_37690 PF14403 Circularly permuted ATP-grasp type 2 AvCA_37700 PF01965 DJ-1/PfpI family AvCA_37710 PF13091 PLD-like domain AvCA_37710 PF13396 Phospholipase_D-nuclease N-terminal AvCA_37730 PF00144 Beta-lactamase AvCA_37780 PF04336 Acyl carrier protein phosphodiesterase AvCA_37800 PF00724 NADH:flavin oxidoreductase / NADH oxidase family AvCA_37820 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain AvCA_37820 PF02777 Iron/manganese superoxide dismutases, C-terminal domain AvCA_37830 PF00563 EAL domain AvCA_37830 PF13188 PAS domain AvCA_37830 PF00990 Diguanylate cyclase, GGDEF domain AvCA_37830 PF03707 Bacterial signalling protein N terminal repeat AvCA_37880 PF08479 POTRA domain, ShlB-type AvCA_37880 PF03865 Haemolysin secretion/activation protein ShlB/FhaC/HecB AvCA_37930 PF03466 LysR substrate binding domain AvCA_37930 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AvCA_37950 PF08659 KR domain AvCA_37950 PF00550 Phosphopantetheine attachment site AvCA_37950 PF16197 Ketoacyl-synthetase C-terminal extension AvCA_37950 PF00107 Zinc-binding dehydrogenase AvCA_37950 PF00698 Acyl transferase domain AvCA_37950 PF02801 Beta-ketoacyl synthase, C-terminal domain AvCA_37950 PF00109 Beta-ketoacyl synthase, N-terminal domain AvCA_37950 PF08240 Alcohol dehydrogenase GroES-like domain AvCA_37950 PF14765 Polyketide synthase dehydratase AvCA_37970 PF01738 Dienelactone hydrolase family AvCA_38000 PF07690 Major Facilitator Superfamily AvCA_38010 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AvCA_38010 PF03466 LysR substrate binding domain AvCA_38040 PF00248 Aldo/keto reductase family AvCA_38050 PF00248 Aldo/keto reductase family AvCA_38070 PF01220 Dehydroquinase class II AvCA_38080 PF08501 Shikimate dehydrogenase substrate binding domain AvCA_38080 PF18317 Shikimate 5'-dehydrogenase C-terminal domain AvCA_38090 PF00440 Bacterial regulatory proteins, tetR family AvCA_38090 PF17938 Tetracyclin repressor-like, C-terminal domain AvCA_38100 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily AvCA_38130 PF03573 outer membrane porin, OprD family AvCA_38140 PF03573 outer membrane porin, OprD family AvCA_38150 PF00248 Aldo/keto reductase family AvCA_38160 PF00892 EamA-like transporter family AvCA_38170 PF02627 Carboxymuconolactone decarboxylase family AvCA_38180 PF12146 Serine aminopeptidase, S33 AvCA_38190 PF00206 Lyase AvCA_38190 PF10397 Adenylosuccinate lyase C-terminus AvCA_38200 PF00108 Thiolase, N-terminal domain AvCA_38200 PF02803 Thiolase, C-terminal domain AvCA_38210 PF01144 Coenzyme A transferase AvCA_38220 PF01144 Coenzyme A transferase AvCA_38230 PF01614 Bacterial transcriptional regulator AvCA_38230 PF09339 IclR helix-turn-helix domain AvCA_38240 PF03969 AFG1-like ATPase AvCA_38250 PF00775 Dioxygenase AvCA_38260 PF12391 Protocatechuate 3,4-dioxygenase beta subunit N terminal AvCA_38260 PF00775 Dioxygenase AvCA_38270 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AvCA_38270 PF03466 LysR substrate binding domain AvCA_38280 PF01842 ACT domain AvCA_38280 PF00551 Formyl transferase AvCA_38320 PF08411 Exonuclease C-terminal AvCA_38320 PF00929 Exonuclease AvCA_38370 PF07726 ATPase family associated with various cellular activities (AAA) AvCA_38370 PF17863 AAA lid domain AvCA_38400 PF00582 Universal stress protein family AvCA_38410 PF02887 Pyruvate kinase, alpha/beta domain AvCA_38410 PF00224 Pyruvate kinase, barrel domain AvCA_38420 PF08448 PAS fold AvCA_38420 PF00990 Diguanylate cyclase, GGDEF domain AvCA_38440 PF05681 Fumarate hydratase (Fumerase) AvCA_38440 PF05683 Fumarase C-terminus AvCA_38460 PF01980 tRNA-methyltransferase O AvCA_38460 PF18389 TrmO C-terminal domain AvCA_38470 PF00970 Oxidoreductase FAD-binding domain AvCA_38470 PF00175 Oxidoreductase NAD-binding domain AvCA_38480 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AvCA_38480 PF03466 LysR substrate binding domain AvCA_38490 PF00072 Response regulator receiver domain AvCA_38490 PF00196 Bacterial regulatory proteins, luxR family AvCA_38520 PF09364 XFP N-terminal domain AvCA_38520 PF03894 D-xylulose 5-phosphate/D-fructose 6-phosphate phosphoketolase AvCA_38520 PF09363 XFP C-terminal domain AvCA_38530 PF00753 Metallo-beta-lactamase superfamily AvCA_38530 PF07521 Zn-dependent metallo-hydrolase RNA specificity domain AvCA_38530 PF10996 Beta-Casp domain AvCA_38550 PF02631 RecX family AvCA_38560 PF00154 recA bacterial DNA recombination protein AvCA_38570 PF02464 Competence-damaged protein AvCA_38610 PF00011 Hsp20/alpha crystallin family AvCA_38620 PF00011 Hsp20/alpha crystallin family AvCA_38640 PF01624 MutS domain I AvCA_38640 PF05190 MutS family domain IV AvCA_38640 PF05192 MutS domain III AvCA_38640 PF00488 MutS domain V AvCA_38640 PF05188 MutS domain II AvCA_38650 PF00037 4Fe-4S binding domain AvCA_38650 PF11953 Domain of unknown function (DUF3470) AvCA_38660 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain AvCA_38660 PF00672 HAMP domain AvCA_38660 PF02203 Tar ligand binding domain homologue AvCA_38670 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain AvCA_38670 PF08447 PAS fold AvCA_38680 PF00140 Sigma-70 factor, region 1.2 AvCA_38680 PF04542 Sigma-70 region 2 AvCA_38680 PF04539 Sigma-70 region 3 AvCA_38680 PF04545 Sigma-70, region 4 AvCA_38690 PF01551 Peptidase family M23 AvCA_38690 PF01476 LysM domain AvCA_38710 PF01975 Survival protein SurE AvCA_38720 PF01142 tRNA pseudouridine synthase D (TruD) AvCA_38730 PF02542 YgbB family AvCA_38740 PF00756 Putative esterase AvCA_38750 PF08240 Alcohol dehydrogenase GroES-like domain AvCA_38750 PF00107 Zinc-binding dehydrogenase AvCA_38770 PF01128 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase AvCA_38780 PF04977 Septum formation initiator AvCA_38790 PF03952 Enolase, N-terminal domain AvCA_38790 PF00113 Enolase, C-terminal TIM barrel domain AvCA_38800 PF00793 DAHP synthetase I family AvCA_38810 PF06418 CTP synthase N-terminus AvCA_38810 PF00117 Glutamine amidotransferase class-I AvCA_38820 PF11734 TilS substrate C-terminal domain AvCA_38820 PF09179 TilS substrate binding domain AvCA_38820 PF01171 PP-loop family AvCA_38830 PF03255 Acetyl co-enzyme A carboxylase carboxyltransferase alpha subunit AvCA_38840 PF14579 Helix-hairpin-helix motif AvCA_38840 PF17657 Bacterial DNA polymerase III alpha subunit finger domain AvCA_38840 PF07733 Bacterial DNA polymerase III alpha NTPase domain AvCA_38840 PF02811 PHP domain AvCA_38840 PF01336 OB-fold nucleic acid binding domain AvCA_38850 PF01351 Ribonuclease HII AvCA_38860 PF02684 Lipid-A-disaccharide synthetase AvCA_38870 PF13720 Udp N-acetylglucosamine O-acyltransferase; Domain 2 AvCA_38870 PF00132 Bacterial transferase hexapeptide (six repeats) AvCA_38880 PF07977 FabA-like domain AvCA_38890 PF00132 Bacterial transferase hexapeptide (six repeats) AvCA_38890 PF04613 UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase, LpxD AvCA_38900 PF03938 Outer membrane protein (OmpH-like) AvCA_38910 PF01103 Surface antigen AvCA_38910 PF07244 Surface antigen variable number repeat AvCA_38920 PF13180 PDZ domain AvCA_38920 PF17820 PDZ domain AvCA_38920 PF02163 Peptidase family M50 AvCA_38930 PF08436 1-deoxy-D-xylulose 5-phosphate reductoisomerase C-terminal domain AvCA_38930 PF02670 1-deoxy-D-xylulose 5-phosphate reductoisomerase AvCA_38930 PF13288 DXP reductoisomerase C-terminal domain AvCA_38950 PF01255 Putative undecaprenyl diphosphate synthase AvCA_38960 PF01765 Ribosome recycling factor AvCA_38970 PF00696 Amino acid kinase family AvCA_38980 PF00889 Elongation factor TS AvCA_38990 PF00318 Ribosomal protein S2 AvCA_39000 PF00557 Metallopeptidase family M24 AvCA_39010 PF01842 ACT domain AvCA_39010 PF08335 GlnD PII-uridylyltransferase AvCA_39010 PF01966 HD domain AvCA_39010 PF01909 Nucleotidyltransferase domain AvCA_39020 PF00155 Aminotransferase class I and II AvCA_39030 PF00999 Sodium/hydrogen exchanger family AvCA_39080 PF03960 ArsC family AvCA_39090 PF14602 Hexapeptide repeat of succinyl-transferase AvCA_39090 PF14789 Tetrahydrodipicolinate N-succinyltransferase middle AvCA_39100 PF00266 Aminotransferase class-V AvCA_39110 PF02657 Fe-S metabolism associated domain AvCA_39130 PF00899 ThiF family AvCA_39140 PF00535 Glycosyl transferase family 2 AvCA_39150 PF01546 Peptidase family M20/M25/M40 AvCA_39150 PF07687 Peptidase dimerisation domain AvCA_39160 PF13847 Methyltransferase domain AvCA_39180 PF00313 'Cold-shock' DNA-binding domain AvCA_39220 PF00005 ABC transporter AvCA_39240 PF04445 Putative SAM-dependent methyltransferase AvCA_39260 PF01904 Protein of unknown function DUF72 AvCA_39270 PF00814 Glycoprotease family AvCA_39280 PF05191 Adenylate kinase, active site lid AvCA_39300 PF00311 Phosphoenolpyruvate carboxylase AvCA_39320 PF01661 Macro domain AvCA_39340 PF12146 Serine aminopeptidase, S33 AvCA_39390 PF01336 OB-fold nucleic acid binding domain AvCA_39390 PF00152 tRNA synthetases class II (D, K and N) AvCA_39400 PF03462 PCRF domain AvCA_39400 PF00472 RF-1 domain AvCA_39430 PF00724 NADH:flavin oxidoreductase / NADH oxidase family AvCA_39440 PF17768 RecJ OB domain AvCA_39440 PF02272 DHHA1 domain AvCA_39440 PF01368 DHH family AvCA_39450 PF07152 YaeQ protein AvCA_39460 PF17151 Periplasmic sensor domain AvCA_39460 PF00990 Diguanylate cyclase, GGDEF domain AvCA_39480 PF14821 Threonine synthase N terminus AvCA_39480 PF00291 Pyridoxal-phosphate dependent enzyme AvCA_39490 PF03447 Homoserine dehydrogenase, NAD binding domain AvCA_39490 PF01842 ACT domain AvCA_39490 PF00742 Homoserine dehydrogenase AvCA_39500 PF10411 Disulfide bond isomerase protein N-terminus AvCA_39500 PF13098 Thioredoxin-like domain AvCA_39510 PF02899 Phage integrase, N-terminal SAM-like domain AvCA_39510 PF00589 Phage integrase family AvCA_39520 PF03061 Thioesterase superfamily AvCA_39530 PF01245 Ribosomal protein L19 AvCA_39540 PF01746 tRNA (Guanine-1)-methyltransferase AvCA_39550 PF01782 RimM N-terminal domain AvCA_39550 PF05239 PRC-barrel domain AvCA_39560 PF00886 Ribosomal protein S16 AvCA_39570 PF02881 SRP54-type protein, helical bundle domain AvCA_39570 PF02978 Signal peptide binding domain AvCA_39570 PF00448 SRP54-type protein, GTPase domain AvCA_39600 PF01595 Cyclin M transmembrane N-terminal domain AvCA_39600 PF00571 CBS domain AvCA_39600 PF03471 Transporter associated domain AvCA_39610 PF02222 ATP-grasp domain AvCA_39610 PF01370 NAD dependent epimerase/dehydratase family AvCA_39620 PF00293 NUDIX domain AvCA_39640 PF03734 L,D-transpeptidase catalytic domain AvCA_39640 PF01476 LysM domain AvCA_39640 PF17969 L,D-transpeptidase C-terminal domain AvCA_39650 PF01784 NIF3 (NGG1p interacting factor 3) AvCA_39660 PF18072 Formylglycinamide ribonucleotide amidotransferase linker domain AvCA_39660 PF18076 Formylglycinamide ribonucleotide amidotransferase N-terminal AvCA_39660 PF02769 AIR synthase related protein, C-terminal domain AvCA_39670 PF01464 Transglycosylase SLT domain AvCA_39670 PF00497 Bacterial extracellular solute-binding proteins, family 3 AvCA_39680 PF14437 MafB19-like deaminase AvCA_39690 PF07732 Multicopper oxidase AvCA_39690 PF07731 Multicopper oxidase AvCA_39690 PF00394 Multicopper oxidase AvCA_39700 PF00111 2Fe-2S iron-sulfur cluster binding domain AvCA_39720 PF00117 Glutamine amidotransferase class-I AvCA_39720 PF02540 NAD synthase AvCA_39720 PF00958 GMP synthase C terminal domain AvCA_39730 PF00478 IMP dehydrogenase / GMP reductase domain AvCA_39730 PF00571 CBS domain AvCA_39750 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain AvCA_39750 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain AvCA_39770 PF02601 Exonuclease VII, large subunit AvCA_39770 PF13742 OB-fold nucleic acid binding domain AvCA_39790 PF01551 Peptidase family M23 AvCA_39790 PF08525 Opacity-associated protein A N-terminal motif AvCA_39790 PF01476 LysM domain AvCA_39870 PF00148 Nitrogenase component 1 type Oxidoreductase AvCA_39890 PF00593 TonB dependent receptor AvCA_39890 PF07715 TonB-dependent Receptor Plug Domain AvCA_39900 PF03466 LysR substrate binding domain AvCA_39900 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AvCA_39910 PF01979 Amidohydrolase family AvCA_39950 PF07690 Major Facilitator Superfamily AvCA_39970 PF17874 MalT-like TPR region AvCA_39970 PF00196 Bacterial regulatory proteins, luxR family AvCA_39990 PF00465 Iron-containing alcohol dehydrogenase AvCA_40000 PF03573 outer membrane porin, OprD family AvCA_40020 PF00175 Oxidoreductase NAD-binding domain AvCA_40020 PF00111 2Fe-2S iron-sulfur cluster binding domain AvCA_40020 PF00970 Oxidoreductase FAD-binding domain AvCA_40050 PF01011 PQQ enzyme repeat AvCA_40060 PF03573 outer membrane porin, OprD family AvCA_40070 PF09084 NMT1/THI5 like AvCA_40120 PF00682 HMGL-like AvCA_40120 PF08502 LeuA allosteric (dimerisation) domain AvCA_40130 PF04231 Endonuclease I AvCA_40140 PF09997 Predicted membrane protein (DUF2238) AvCA_40170 PF00795 Carbon-nitrogen hydrolase AvCA_40190 PF00155 Aminotransferase class I and II AvCA_40210 PF07715 TonB-dependent Receptor Plug Domain AvCA_40210 PF00593 TonB dependent receptor AvCA_40210 PF07660 Secretin and TonB N terminus short domain AvCA_40240 PF14714 KH-domain-like of EngA bacterial GTPase enzymes, C-terminal AvCA_40240 PF01926 50S ribosome-binding GTPase AvCA_40260 PF13360 PQQ-like domain AvCA_40270 PF09976 Tetratricopeptide repeat-like domain AvCA_40280 PF13393 Histidyl-tRNA synthetase AvCA_40280 PF03129 Anticodon binding domain AvCA_40290 PF04551 GcpE protein AvCA_40320 PF04055 Radical SAM superfamily AvCA_40330 PF00334 Nucleoside diphosphate kinase AvCA_40340 PF04384 Iron-sulphur cluster assembly AvCA_40350 PF00111 2Fe-2S iron-sulfur cluster binding domain AvCA_40360 PF00012 Hsp70 protein AvCA_40370 PF07743 HSCB C-terminal oligomerisation domain AvCA_40370 PF00226 DnaJ domain AvCA_40380 PF01521 Iron-sulphur cluster biosynthesis AvCA_40390 PF01592 NifU-like N terminal domain AvCA_40400 PF00266 Aminotransferase class-V AvCA_40410 PF02082 Transcriptional regulator AvCA_40420 PF00132 Bacterial transferase hexapeptide (six repeats) AvCA_40430 PF00588 SpoU rRNA Methylase family AvCA_40440 PF00459 Inositol monophosphatase family AvCA_40450 PF02355 Protein export membrane protein AvCA_40450 PF07549 SecD/SecF GG Motif AvCA_40460 PF07549 SecD/SecF GG Motif AvCA_40460 PF13721 SecD export protein N-terminal TM region AvCA_40460 PF02355 Protein export membrane protein AvCA_40470 PF02699 Preprotein translocase subunit AvCA_40480 PF01702 Queuine tRNA-ribosyltransferase AvCA_40490 PF02547 Queuosine biosynthesis protein AvCA_40500 PF13356 Arm DNA-binding domain AvCA_40500 PF14659 Phage integrase, N-terminal SAM-like domain AvCA_40500 PF00589 Phage integrase family AvCA_40520 PF13276 HTH-like domain AvCA_40520 PF13333 Integrase core domain AvCA_40520 PF00665 Integrase core domain AvCA_40530 PF01548 Transposase AvCA_40530 PF02371 Transposase IS116/IS110/IS902 family AvCA_40540 PF01527 Transposase AvCA_40590 PF01381 Helix-turn-helix AvCA_40600 PF05973 Phage derived protein Gp49-like (DUF891) AvCA_40720 PF01649 Ribosomal protein S20 AvCA_40730 PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain AvCA_40730 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain AvCA_40750 PF05981 CreA protein AvCA_40760 PF00696 Amino acid kinase family AvCA_40760 PF01472 PUA domain AvCA_40770 PF01018 GTP1/OBG AvCA_40770 PF01926 50S ribosome-binding GTPase AvCA_40780 PF01016 Ribosomal L27 protein AvCA_40790 PF00829 Ribosomal prokaryotic L21 protein AvCA_40810 PF00348 Polyprenyl synthetase AvCA_40820 PF01346 Domain amino terminal to FKBP-type peptidyl-prolyl isomerase AvCA_40820 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase AvCA_40830 PF03350 Uncharacterized protein family, UPF0114 AvCA_40850 PF13654 AAA domain AvCA_40850 PF05362 Lon protease (S16) C-terminal proteolytic domain AvCA_40910 PF00593 TonB dependent receptor AvCA_40910 PF07660 Secretin and TonB N terminus short domain AvCA_40910 PF07715 TonB-dependent Receptor Plug Domain AvCA_40940 PF08281 Sigma-70, region 4 AvCA_40940 PF04542 Sigma-70 region 2 AvCA_40960 PF12848 ABC transporter AvCA_40960 PF00005 ABC transporter AvCA_40970 PF00464 Serine hydroxymethyltransferase AvCA_40980 PF02492 CobW/HypB/UreG, nucleotide-binding domain AvCA_40980 PF07683 Cobalamin synthesis protein cobW C-terminal domain AvCA_41000 PF04328 Selenoprotein, putative AvCA_41010 PF13722 5TM C-terminal transporter carbon starvation CstA AvCA_41010 PF02554 Carbon starvation protein CstA AvCA_41030 PF07730 Histidine kinase AvCA_41030 PF17200 Single Cache domain 2 AvCA_41040 PF00072 Response regulator receiver domain AvCA_41040 PF00196 Bacterial regulatory proteins, luxR family AvCA_41070 PF18073 Rubredoxin metal binding domain AvCA_41090 PF01741 Large-conductance mechanosensitive channel, MscL AvCA_41100 PF00255 Glutathione peroxidase AvCA_41110 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase AvCA_41120 PF00871 Acetokinase family AvCA_41130 PF01515 Phosphate acetyl/butaryl transferase AvCA_41130 PF07085 DRTGG domain AvCA_41140 PF00691 OmpA family AvCA_41140 PF01389 OmpA-like transmembrane domain AvCA_41150 PF00753 Metallo-beta-lactamase superfamily AvCA_41160 PF00072 Response regulator receiver domain AvCA_41180 PF00565 Staphylococcal nuclease homologue AvCA_41190 PF00072 Response regulator receiver domain AvCA_41190 PF01627 Hpt domain AvCA_41190 PF00512 His Kinase A (phospho-acceptor) domain AvCA_41190 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AvCA_41210 PF01471 Putative peptidoglycan binding domain AvCA_41210 PF03734 L,D-transpeptidase catalytic domain AvCA_41230 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain AvCA_41230 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain AvCA_41240 PF08468 Methyltransferase small domain N-terminal AvCA_41240 PF05175 Methyltransferase small domain AvCA_41250 PF01169 Uncharacterized protein family UPF0016 AvCA_41260 PF01169 Uncharacterized protein family UPF0016 AvCA_41270 PF01435 Peptidase family M48 AvCA_41280 PF02586 SOS response associated peptidase (SRAP) AvCA_41330 PF06039 Malate:quinone oxidoreductase (Mqo) AvCA_41370 PF00762 Ferrochelatase AvCA_41380 PF08338 Domain of unknown function (DUF1731) AvCA_41380 PF01370 NAD dependent epimerase/dehydratase family AvCA_41390 PF01593 Flavin containing amine oxidoreductase AvCA_41410 PF13411 MerR HTH family regulatory protein AvCA_41430 PF03441 FAD binding domain of DNA photolyase AvCA_41430 PF00875 DNA photolyase AvCA_41440 PF01177 Asp/Glu/Hydantoin racemase AvCA_41450 PF00899 ThiF family AvCA_41460 PF17827 PrmC N-terminal domain AvCA_41460 PF05175 Methyltransferase small domain AvCA_41470 PF00472 RF-1 domain AvCA_41470 PF03462 PCRF domain AvCA_41480 PF05201 Glutamyl-tRNAGlu reductase, N-terminal domain AvCA_41480 PF00745 Glutamyl-tRNAGlu reductase, dimerisation domain AvCA_41480 PF01488 Shikimate / quinate 5-dehydrogenase AvCA_41500 PF03550 Outer membrane lipoprotein LolB AvCA_41510 PF08544 GHMP kinases C terminal AvCA_41510 PF00288 GHMP kinases N terminal domain AvCA_41520 PF14572 Phosphoribosyl synthetase-associated domain AvCA_41520 PF13793 N-terminal domain of ribose phosphate pyrophosphokinase AvCA_41530 PF01386 Ribosomal L25p family AvCA_41530 PF14693 Ribosomal protein TL5, C-terminal domain AvCA_41540 PF01195 Peptidyl-tRNA hydrolase AvCA_41550 PF01926 50S ribosome-binding GTPase AvCA_41550 PF06071 Protein of unknown function (DUF933) AvCA_41600 PF12161 HsdM N-terminal domain AvCA_41600 PF02384 N-6 DNA Methylase AvCA_41610 PF00675 Insulinase (Peptidase family M16) AvCA_41610 PF05193 Peptidase M16 inactive domain AvCA_41640 PF04055 Radical SAM superfamily AvCA_41640 PF13186 Iron-sulfur cluster-binding domain AvCA_41650 PF05402 Coenzyme PQQ synthesis protein D (PqqD) AvCA_41660 PF03070 TENA/THI-4/PQQC family AvCA_41670 PF12706 Beta-lactamase superfamily domain AvCA_41690 PF01590 GAF domain AvCA_41690 PF02954 Bacterial regulatory protein, Fis family AvCA_41690 PF00158 Sigma-54 interaction domain AvCA_41720 PF01513 ATP-NAD kinase AvCA_41730 PF00676 Dehydrogenase E1 component AvCA_41740 PF02779 Transketolase, pyrimidine binding domain AvCA_41740 PF02780 Transketolase, C-terminal domain AvCA_41750 PF00364 Biotin-requiring enzyme AvCA_41750 PF00561 alpha/beta hydrolase fold AvCA_41760 PF08240 Alcohol dehydrogenase GroES-like domain AvCA_41760 PF00107 Zinc-binding dehydrogenase AvCA_41790 PF07690 Major Facilitator Superfamily AvCA_41810 PF00753 Metallo-beta-lactamase superfamily AvCA_41840 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AvCA_41840 PF03466 LysR substrate binding domain AvCA_41860 PF13333 Integrase core domain AvCA_41860 PF13276 HTH-like domain AvCA_41860 PF00665 Integrase core domain AvCA_41870 PF02371 Transposase IS116/IS110/IS902 family AvCA_41870 PF01548 Transposase AvCA_41880 PF01527 Transposase AvCA_41890 PF00083 Sugar (and other) transporter AvCA_41950 PF01740 STAS domain AvCA_41950 PF00916 Sulfate permease family AvCA_41970 PF13302 Acetyltransferase (GNAT) domain AvCA_42030 PF01381 Helix-turn-helix AvCA_42060 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AvCA_42060 PF03466 LysR substrate binding domain AvCA_42070 PF03594 Benzoate membrane transport protein AvCA_42090 PF03573 outer membrane porin, OprD family AvCA_42100 PF00970 Oxidoreductase FAD-binding domain AvCA_42100 PF00111 2Fe-2S iron-sulfur cluster binding domain AvCA_42100 PF00175 Oxidoreductase NAD-binding domain AvCA_42110 PF07690 Major Facilitator Superfamily AvCA_42120 PF00682 HMGL-like AvCA_42120 PF07836 DmpG-like communication domain AvCA_42130 PF09290 Prokaryotic acetaldehyde dehydrogenase, dimerisation AvCA_42130 PF01118 Semialdehyde dehydrogenase, NAD binding domain AvCA_42150 PF01557 Fumarylacetoacetate (FAA) hydrolase family AvCA_42170 PF00106 short chain dehydrogenase AvCA_42180 PF00866 Ring hydroxylating beta subunit AvCA_42190 PF00355 Rieske [2Fe-2S] domain AvCA_42190 PF00848 Ring hydroxylating alpha subunit (catalytic domain) AvCA_42210 PF02900 Catalytic LigB subunit of aromatic ring-opening dioxygenase AvCA_42230 PF00561 alpha/beta hydrolase fold AvCA_42310 PF12708 Pectate lyase superfamily protein AvCA_42310 PF00353 RTX calcium-binding nonapeptide repeat (4 copies) AvCA_42310 PF13229 Right handed beta helix region AvCA_42330 PF07969 Amidohydrolase family AvCA_42350 PF00857 Isochorismatase family AvCA_42360 PF12833 Helix-turn-helix domain AvCA_42370 PF07282 Putative transposase DNA-binding domain AvCA_42370 PF12323 Helix-turn-helix domain AvCA_42370 PF01385 Probable transposase AvCA_42390 PF00982 Glycosyltransferase family 20 AvCA_42400 PF02358 Trehalose-phosphatase AvCA_42420 PF00583 Acetyltransferase (GNAT) family AvCA_42440 PF00682 HMGL-like AvCA_42440 PF08502 LeuA allosteric (dimerisation) domain AvCA_42450 PF02470 MlaD protein AvCA_42460 PF04403 Paraquat-inducible protein A AvCA_42470 PF04403 Paraquat-inducible protein A AvCA_42490 PF01066 CDP-alcohol phosphatidyltransferase AvCA_42500 PF07991 Acetohydroxy acid isomeroreductase, NADPH-binding domain AvCA_42500 PF01450 Acetohydroxy acid isomeroreductase, catalytic domain AvCA_42510 PF10369 Small subunit of acetolactate synthase AvCA_42520 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain AvCA_42520 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain AvCA_42520 PF00205 Thiamine pyrophosphate enzyme, central domain AvCA_42540 PF04287 tRNA pseudouridine synthase C AvCA_42560 PF00912 Transglycosylase AvCA_42560 PF00905 Penicillin binding protein transpeptidase domain AvCA_42560 PF14814 Bifunctional transglycosylase second domain AvCA_42590 PF00005 ABC transporter AvCA_42600 PF01032 FecCD transport family AvCA_42620 PF17746 SfsA N-terminal OB domain AvCA_42620 PF03749 Sugar fermentation stimulation protein RE domain AvCA_42630 PF00155 Aminotransferase class I and II AvCA_42640 PF01258 Prokaryotic dksA/traR C4-type zinc finger AvCA_42650 PF00749 tRNA synthetases class I (E and Q), catalytic domain AvCA_42670 PF00512 His Kinase A (phospho-acceptor) domain AvCA_42670 PF00989 PAS fold AvCA_42670 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AvCA_42680 PF02954 Bacterial regulatory protein, Fis family AvCA_42680 PF00158 Sigma-54 interaction domain AvCA_42680 PF00072 Response regulator receiver domain AvCA_42690 PF12627 Probable RNA and SrmB- binding site of polymerase A AvCA_42690 PF12626 Polymerase A arginine-rich C-terminus AvCA_42690 PF01743 Poly A polymerase head domain AvCA_42700 PF01288 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK) AvCA_42710 PF02548 Ketopantoate hydroxymethyltransferase AvCA_42720 PF02569 Pantoate-beta-alanine ligase AvCA_42730 PF02261 Aspartate decarboxylase AvCA_42740 PF00342 Phosphoglucose isomerase AvCA_42750 PF13193 AMP-binding enzyme C-terminal domain AvCA_42750 PF00501 AMP-binding enzyme AvCA_42750 PF16177 Acetyl-coenzyme A synthetase N-terminus AvCA_42780 PF03725 3' exoribonuclease family, domain 2 AvCA_42780 PF01138 3' exoribonuclease family, domain 1 AvCA_42780 PF00013 KH domain AvCA_42780 PF03726 Polyribonucleotide nucleotidyltransferase, RNA binding domain AvCA_42780 PF00575 S1 RNA binding domain AvCA_42790 PF00312 Ribosomal protein S15 AvCA_42800 PF09157 Pseudouridine synthase II TruB, C-terminal AvCA_42800 PF16198 tRNA pseudouridylate synthase B C-terminal domain AvCA_42800 PF01509 TruB family pseudouridylate synthase (N terminal domain) AvCA_42810 PF02033 Ribosome-binding factor A AvCA_42820 PF00009 Elongation factor Tu GTP binding domain AvCA_42820 PF11987 Translation-initiation factor 2 AvCA_42820 PF08364 Bacterial translation initiation factor IF-2 associated region AvCA_42820 PF04760 Translation initiation factor IF-2, N-terminal region AvCA_42830 PF00575 S1 RNA binding domain AvCA_42830 PF08529 NusA N-terminal domain AvCA_42830 PF13184 NusA-like KH domain AvCA_42840 PF17384 RimP C-terminal SH3 domain AvCA_42840 PF02576 RimP N-terminal domain AvCA_42850 PF03840 Preprotein translocase SecG subunit AvCA_42860 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain AvCA_42860 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III AvCA_42860 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II AvCA_42860 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I AvCA_42870 PF00809 Pterin binding enzyme AvCA_42890 PF17862 AAA+ lid domain AvCA_42890 PF06480 FtsH Extracellular AvCA_42890 PF00004 ATPase family associated with various cellular activities (AAA) AvCA_42890 PF01434 Peptidase family M41 AvCA_42900 PF01728 FtsJ-like methyltransferase AvCA_42910 PF01985 CRS1 / YhbY (CRM) domain AvCA_42920 PF03449 Transcription elongation factor, N-terminal AvCA_42920 PF01272 Transcription elongation factor, GreA/GreB, C-term AvCA_42930 PF02787 Carbamoyl-phosphate synthetase large chain, oligomerisation domain AvCA_42930 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain AvCA_42930 PF02142 MGS-like domain AvCA_42940 PF00117 Glutamine amidotransferase class-I AvCA_42940 PF00988 Carbamoyl-phosphate synthase small chain, CPSase domain AvCA_42950 PF01113 Dihydrodipicolinate reductase, N-terminus AvCA_42950 PF05173 Dihydrodipicolinate reductase, C-terminus AvCA_42960 PF00226 DnaJ domain AvCA_42960 PF00684 DnaJ central domain AvCA_42960 PF01556 DnaJ C terminal domain AvCA_42970 PF00012 Hsp70 protein AvCA_42980 PF01025 GrpE AvCA_42990 PF02463 RecF/RecN/SMC N terminal domain AvCA_43000 PF01475 Ferric uptake regulator family AvCA_43020 PF04355 SmpA / OmlA family AvCA_43030 PF03658 RnfH family Ubiquitin AvCA_43040 PF03364 Polyketide cyclase / dehydrase and lipid transport AvCA_43050 PF01668 SmpB protein AvCA_43060 PF07729 FCD domain AvCA_43060 PF00392 Bacterial regulatory proteins, gntR family AvCA_43070 PF02652 L-lactate permease AvCA_43080 PF02754 Cysteine-rich domain AvCA_43090 PF13183 4Fe-4S dicluster domain AvCA_43090 PF02589 LUD domain AvCA_43090 PF11870 Domain of unknown function (DUF3390) AvCA_43100 PF02589 LUD domain AvCA_43120 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AvCA_43120 PF00512 His Kinase A (phospho-acceptor) domain AvCA_43160 PF00239 Resolvase, N terminal domain AvCA_43160 PF02796 Helix-turn-helix domain of resolvase AvCA_43200 PF00696 Amino acid kinase family AvCA_43210 PF00696 Amino acid kinase family AvCA_43230 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain AvCA_43230 PF00205 Thiamine pyrophosphate enzyme, central domain AvCA_43230 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain AvCA_43240 PF03466 LysR substrate binding domain AvCA_43240 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AvCA_43250 PF03949 Malic enzyme, NAD binding domain AvCA_43250 PF00390 Malic enzyme, N-terminal domain AvCA_43260 PF02652 L-lactate permease AvCA_43290 PF01274 Malate synthase AvCA_43300 PF03928 Haem-degrading AvCA_43310 PF13183 4Fe-4S dicluster domain AvCA_43310 PF02754 Cysteine-rich domain AvCA_43320 PF01565 FAD binding domain AvCA_43330 PF01565 FAD binding domain AvCA_43330 PF02913 FAD linked oxidases, C-terminal domain AvCA_43340 PF07729 FCD domain AvCA_43340 PF00392 Bacterial regulatory proteins, gntR family AvCA_43350 PF03952 Enolase, N-terminal domain AvCA_43350 PF00113 Enolase, C-terminal TIM barrel domain AvCA_43370 PF02887 Pyruvate kinase, alpha/beta domain AvCA_43370 PF00224 Pyruvate kinase, barrel domain AvCA_43380 PF05651 Putative sugar diacid recognition AvCA_43380 PF17853 GGDEF-like domain AvCA_43380 PF13556 PucR C-terminal helix-turn-helix domain AvCA_43390 PF02595 Glycerate kinase family AvCA_43400 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain AvCA_43400 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain AvCA_43400 PF00205 Thiamine pyrophosphate enzyme, central domain AvCA_43410 PF01261 Xylose isomerase-like TIM barrel AvCA_43420 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase AvCA_43420 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase AvCA_43440 PF17954 Quercetinase C-terminal cupin domain AvCA_43440 PF02678 Pirin AvCA_43460 PF00521 DNA gyrase/topoisomerase IV, subunit A AvCA_43460 PF03989 DNA gyrase C-terminal domain, beta-propeller AvCA_43480 PF00986 DNA gyrase B subunit, carboxyl terminus AvCA_43480 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AvCA_43480 PF00204 DNA gyrase B AvCA_43480 PF01751 Toprim domain AvCA_43490 PF05728 Uncharacterised protein family (UPF0227) AvCA_43500 PF00149 Calcineurin-like phosphoesterase AvCA_43520 PF02653 Branched-chain amino acid transport system / permease component AvCA_43540 PF12399 Branched-chain amino acid ATP-binding cassette transporter AvCA_43540 PF00005 ABC transporter AvCA_43560 PF00296 Luciferase-like monooxygenase AvCA_43590 PF02653 Branched-chain amino acid transport system / permease component AvCA_43600 PF02653 Branched-chain amino acid transport system / permease component AvCA_43610 PF00005 ABC transporter AvCA_43640 PF02771 Acyl-CoA dehydrogenase, N-terminal domain AvCA_43640 PF02770 Acyl-CoA dehydrogenase, middle domain AvCA_43640 PF00441 Acyl-CoA dehydrogenase, C-terminal domain AvCA_43650 PF02771 Acyl-CoA dehydrogenase, N-terminal domain AvCA_43650 PF08028 Acyl-CoA dehydrogenase, C-terminal domain AvCA_43660 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain AvCA_43660 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain AvCA_43690 PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase AvCA_43690 PF00925 GTP cyclohydrolase II AvCA_43710 PF00005 ABC transporter AvCA_43740 PF00296 Luciferase-like monooxygenase AvCA_43780 PF00005 ABC transporter AvCA_43780 PF12399 Branched-chain amino acid ATP-binding cassette transporter AvCA_43810 PF00296 Luciferase-like monooxygenase AvCA_43830 PF03573 outer membrane porin, OprD family AvCA_43850 PF01053 Cys/Met metabolism PLP-dependent enzyme AvCA_43870 PF00296 Luciferase-like monooxygenase AvCA_43890 PF08028 Acyl-CoA dehydrogenase, C-terminal domain AvCA_43890 PF02771 Acyl-CoA dehydrogenase, N-terminal domain AvCA_43900 PF00158 Sigma-54 interaction domain AvCA_43920 PF00216 Bacterial DNA-binding protein AvCA_44010 PF11339 Protein of unknown function (DUF3141) AvCA_44020 PF01515 Phosphate acetyl/butaryl transferase AvCA_44030 PF00871 Acetokinase family AvCA_44050 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion AvCA_44060 PF00873 AcrB/AcrD/AcrF family AvCA_44070 PF04403 Paraquat-inducible protein A AvCA_44080 PF04403 Paraquat-inducible protein A AvCA_44090 PF02470 MlaD protein AvCA_44110 PF01527 Transposase AvCA_44130 PF00593 TonB dependent receptor AvCA_44130 PF07660 Secretin and TonB N terminus short domain AvCA_44130 PF07715 TonB-dependent Receptor Plug Domain AvCA_44150 PF08281 Sigma-70, region 4 AvCA_44150 PF04542 Sigma-70 region 2 AvCA_44170 PF01594 AI-2E family transporter AvCA_44200 PF00529 HlyD membrane-fusion protein of T1SS AvCA_44200 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion AvCA_44210 PF02321 Outer membrane efflux protein AvCA_44220 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase AvCA_44230 PF00005 ABC transporter AvCA_44230 PF00664 ABC transporter transmembrane region AvCA_44240 PF00155 Aminotransferase class I and II AvCA_44250 PF00550 Phosphopantetheine attachment site AvCA_44310 PF00483 Nucleotidyl transferase AvCA_44350 PF01066 CDP-alcohol phosphatidyltransferase AvCA_44450 PF00535 Glycosyl transferase family 2 AvCA_44470 PF03707 Bacterial signalling protein N terminal repeat AvCA_44470 PF00563 EAL domain AvCA_44470 PF00990 Diguanylate cyclase, GGDEF domain AvCA_44500 PF03466 LysR substrate binding domain AvCA_44500 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AvCA_44510 PF02771 Acyl-CoA dehydrogenase, N-terminal domain AvCA_44510 PF08028 Acyl-CoA dehydrogenase, C-terminal domain AvCA_44530 PF00528 Binding-protein-dependent transport system inner membrane component AvCA_44540 PF00005 ABC transporter AvCA_44580 PF00293 NUDIX domain AvCA_44600 PF01964 Radical SAM ThiC family AvCA_44600 PF13667 ThiC-associated domain AvCA_44610 PF04413 3-Deoxy-D-manno-octulosonic-acid transferase (kdotransferase) AvCA_44620 PF01266 FAD dependent oxidoreductase AvCA_44630 PF00248 Aldo/keto reductase family AvCA_44660 PF02371 Transposase IS116/IS110/IS902 family AvCA_44660 PF01548 Transposase AvCA_44680 PF00294 pfkB family carbohydrate kinase AvCA_44680 PF01467 Cytidylyltransferase-like AvCA_44690 PF02585 GlcNAc-PI de-N-acetylase AvCA_44710 PF00005 ABC transporter AvCA_44710 PF00664 ABC transporter transmembrane region AvCA_44740 PF16363 GDP-mannose 4,6 dehydratase AvCA_44760 PF01501 Glycosyl transferase family 8 AvCA_44760 PF08437 Glycosyl transferase family 8 C-terminal AvCA_44790 PF13439 Glycosyltransferase Family 4 AvCA_44790 PF00534 Glycosyl transferases group 1 AvCA_44800 PF02543 Carbamoyltransferase N-terminus AvCA_44800 PF16861 Carbamoyltransferase C-terminus AvCA_44840 PF13439 Glycosyltransferase Family 4 AvCA_44840 PF00534 Glycosyl transferases group 1 AvCA_44850 PF01075 Glycosyltransferase family 9 (heptosyltransferase) AvCA_44860 PF01075 Glycosyltransferase family 9 (heptosyltransferase) AvCA_44880 PF01063 Amino-transferase class IV AvCA_44890 PF03710 Glutamate-ammonia ligase adenylyltransferase AvCA_44890 PF08335 GlnD PII-uridylyltransferase AvCA_44900 PF17831 Pyruvate dehydrogenase E1 component middle domain AvCA_44900 PF00456 Transketolase, thiamine diphosphate binding domain AvCA_44910 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) AvCA_44910 PF02817 e3 binding domain AvCA_44910 PF00364 Biotin-requiring enzyme AvCA_44920 PF00689 Cation transporting ATPase, C-terminus AvCA_44920 PF00690 Cation transporter/ATPase, N-terminus AvCA_44940 PF01625 Peptide methionine sulfoxide reductase AvCA_44970 PF07660 Secretin and TonB N terminus short domain AvCA_44970 PF07715 TonB-dependent Receptor Plug Domain AvCA_44970 PF00593 TonB dependent receptor AvCA_44980 PF05016 ParE toxin of type II toxin-antitoxin system, parDE AvCA_45040 PF04378 Ribosomal RNA large subunit methyltransferase D, RlmJ AvCA_45050 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AvCA_45050 PF03466 LysR substrate binding domain AvCA_45080 PF01361 Tautomerase enzyme AvCA_45090 PF03471 Transporter associated domain AvCA_45090 PF00999 Sodium/hydrogen exchanger family AvCA_45090 PF02080 TrkA-C domain AvCA_45100 PF00924 Mechanosensitive ion channel AvCA_45100 PF12795 Mechanosensitive ion channel porin domain AvCA_45100 PF12794 Mechanosensitive ion channel inner membrane domain 1 AvCA_45110 PF02696 Uncharacterized ACR, YdiU/UPF0061 family AvCA_45130 PF01925 Sulfite exporter TauE/SafE AvCA_45140 PF00085 Thioredoxin AvCA_45160 PF13614 AAA domain AvCA_45170 PF03466 LysR substrate binding domain AvCA_45170 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AvCA_45180 PF07690 Major Facilitator Superfamily AvCA_45190 PF01208 Uroporphyrinogen decarboxylase (URO-D) AvCA_45200 PF07992 Pyridine nucleotide-disulphide oxidoreductase AvCA_45200 PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster AvCA_45210 PF04898 Glutamate synthase central domain AvCA_45210 PF01645 Conserved region in glutamate synthase AvCA_45210 PF01493 GXGXG motif AvCA_45210 PF00310 Glutamine amidotransferases class-II AvCA_45230 PF05036 Sporulation related domain AvCA_45240 PF01761 3-dehydroquinate synthase AvCA_45250 PF01202 Shikimate kinase AvCA_45260 PF07660 Secretin and TonB N terminus short domain AvCA_45260 PF11741 AMIN domain AvCA_45260 PF00263 Bacterial type II and III secretion system protein AvCA_45260 PF03958 Bacterial type II/III secretion system short domain AvCA_45300 PF00012 Hsp70 protein AvCA_45310 PF17092 Penicillin-binding protein OB-like domain AvCA_45310 PF00905 Penicillin binding protein transpeptidase domain AvCA_45310 PF00912 Transglycosylase AvCA_45320 PF01609 Transposase DDE domain AvCA_45320 PF13006 Insertion element 4 transposase N-terminal AvCA_45320 PF01609 Transposase DDE domain AvCA_45320 PF13006 Insertion element 4 transposase N-terminal AvCA_45330 PF00390 Malic enzyme, N-terminal domain AvCA_45330 PF03949 Malic enzyme, NAD binding domain AvCA_45340 PF01197 Ribosomal protein L31 AvCA_45350 PF00271 Helicase conserved C-terminal domain AvCA_45350 PF18319 PriA DNA helicase Cys-rich region (CRR) domain AvCA_45350 PF18074 Primosomal protein N C-terminal domain AvCA_45350 PF17764 3′ DNA-binding domain (3′BD) AvCA_45350 PF00270 DEAD/DEAH box helicase AvCA_45360 PF00750 tRNA synthetases class I (R) AvCA_45360 PF03485 Arginyl tRNA synthetase N terminal domain AvCA_45360 PF05746 DALR anticodon binding domain AvCA_45380 PF00227 Proteasome subunit AvCA_45390 PF07724 AAA domain (Cdc48 subfamily) AvCA_45390 PF00004 ATPase family associated with various cellular activities (AAA) AvCA_45410 PF01209 ubiE/COQ5 methyltransferase family AvCA_45430 PF03109 ABC1 family AvCA_45440 PF01502 Phosphoribosyl-AMP cyclohydrolase AvCA_45450 PF01503 Phosphoribosyl-ATP pyrophosphohydrolase AvCA_45460 PF02416 mttA/Hcf106 family AvCA_45470 PF02416 mttA/Hcf106 family AvCA_45480 PF00902 Sec-independent protein translocase protein (TatC) AvCA_45500 PF00535 Glycosyl transferase family 2 AvCA_45510 PF04349 Periplasmic glucan biosynthesis protein, MdoG AvCA_45520 PF00535 Glycosyl transferase family 2 AvCA_45530 PF04349 Periplasmic glucan biosynthesis protein, MdoG AvCA_45540 PF03682 Uncharacterised protein family (UPF0158) AvCA_45550 PF02580 D-Tyr-tRNA(Tyr) deacylase AvCA_45560 PF00561 alpha/beta hydrolase fold AvCA_45590 PF02558 Ketopantoate reductase PanE/ApbA AvCA_45590 PF08546 Ketopantoate reductase PanE/ApbA C terminal AvCA_45640 PF00316 Fructose-1-6-bisphosphatase, N-terminal domain AvCA_45650 PF00343 Carbohydrate phosphorylase AvCA_45700 PF00230 Major intrinsic protein AvCA_45710 PF00370 FGGY family of carbohydrate kinases, N-terminal domain AvCA_45710 PF02782 FGGY family of carbohydrate kinases, C-terminal domain AvCA_45720 PF08220 DeoR-like helix-turn-helix domain AvCA_45720 PF00455 DeoR C terminal sensor domain AvCA_45730 PF16901 C-terminal domain of alpha-glycerophosphate oxidase AvCA_45730 PF01266 FAD dependent oxidoreductase AvCA_45760 PF03952 Enolase, N-terminal domain AvCA_45760 PF00113 Enolase, C-terminal TIM barrel domain AvCA_45770 PF00121 Triosephosphate isomerase AvCA_45780 PF00171 Aldehyde dehydrogenase family AvCA_45790 PF01548 Transposase AvCA_45790 PF02371 Transposase IS116/IS110/IS902 family AvCA_45820 PF00078 Reverse transcriptase (RNA-dependent DNA polymerase) AvCA_45840 PF02926 THUMP domain AvCA_45840 PF02568 Thiamine biosynthesis protein (ThiI) AvCA_45850 PF00120 Glutamine synthetase, catalytic domain AvCA_45850 PF03951 Glutamine synthetase, beta-Grasp domain AvCA_45890 PF00989 PAS fold AvCA_45890 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AvCA_45890 PF00512 His Kinase A (phospho-acceptor) domain AvCA_45900 PF02954 Bacterial regulatory protein, Fis family AvCA_45900 PF00072 Response regulator receiver domain AvCA_45900 PF00158 Sigma-54 interaction domain AvCA_45910 PF00578 AhpC/TSA family AvCA_45910 PF10417 C-terminal domain of 1-Cys peroxiredoxin AvCA_45920 PF02770 Acyl-CoA dehydrogenase, middle domain AvCA_45920 PF02771 Acyl-CoA dehydrogenase, N-terminal domain AvCA_45920 PF00441 Acyl-CoA dehydrogenase, C-terminal domain AvCA_45920 PF12806 Acetyl-CoA dehydrogenase C-terminal like AvCA_45940 PF00881 Nitroreductase family AvCA_45950 PF00258 Flavodoxin AvCA_45990 PF01479 S4 domain AvCA_45990 PF00579 tRNA synthetases class I (W and Y) AvCA_46000 PF04225 Opacity-associated protein A LysM-like domain AvCA_46000 PF01551 Peptidase family M23 AvCA_46010 PF03702 Anhydro-N-acetylmuramic acid kinase AvCA_46020 PF00078 Reverse transcriptase (RNA-dependent DNA polymerase) AvCA_46030 PF01521 Iron-sulphur cluster biosynthesis AvCA_46040 PF01118 Semialdehyde dehydrogenase, NAD binding domain AvCA_46040 PF02774 Semialdehyde dehydrogenase, dimerisation domain AvCA_46060 PF01230 HIT domain AvCA_46070 PF03232 Ubiquinone biosynthesis protein COQ7 AvCA_46080 PF02675 S-adenosylmethionine decarboxylase AvCA_46090 PF02566 OsmC-like protein AvCA_46100 PF13545 Crp-like helix-turn-helix domain AvCA_46100 PF00027 Cyclic nucleotide-binding domain AvCA_46110 PF00218 Indole-3-glycerol phosphate synthase AvCA_46120 PF02885 Glycosyl transferase family, helical bundle domain AvCA_46120 PF00591 Glycosyl transferase family, a/b domain AvCA_46130 PF00117 Glutamine amidotransferase class-I AvCA_46140 PF09335 SNARE associated Golgi protein AvCA_46150 PF01139 tRNA-splicing ligase RtcB AvCA_46160 PF02780 Transketolase, C-terminal domain AvCA_46160 PF02779 Transketolase, pyrimidine binding domain AvCA_46160 PF00364 Biotin-requiring enzyme AvCA_46170 PF00676 Dehydrogenase E1 component AvCA_46190 PF13411 MerR HTH family regulatory protein AvCA_46210 PF13793 N-terminal domain of ribose phosphate pyrophosphokinase AvCA_46210 PF14572 Phosphoribosyl synthetase-associated domain AvCA_46220 PF00857 Isochorismatase family AvCA_46230 PF17767 Nicotinate phosphoribosyltransferase (NAPRTase) N-terminal domain AvCA_46230 PF04095 Nicotinate phosphoribosyltransferase (NAPRTase) family AvCA_46240 PF09587 Bacterial capsule synthesis protein PGA_cap AvCA_46260 PF02525 Flavodoxin-like fold AvCA_46280 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain AvCA_46280 PF12833 Helix-turn-helix domain AvCA_46280 PF02805 Metal binding domain of Ada AvCA_46280 PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain AvCA_46320 PF13180 PDZ domain AvCA_46350 PF00082 Subtilase family AvCA_46350 PF01483 Proprotein convertase P-domain AvCA_46360 PF00892 EamA-like transporter family AvCA_46370 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AvCA_46370 PF03466 LysR substrate binding domain AvCA_46380 PF07690 Major Facilitator Superfamily AvCA_46390 PF13533 Biotin-lipoyl like AvCA_46400 PF02321 Outer membrane efflux protein AvCA_46420 PF02567 Phenazine biosynthesis-like protein AvCA_46440 PF02548 Ketopantoate hydroxymethyltransferase AvCA_46460 PF01037 Lrp/AsnC ligand binding domain AvCA_46470 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AvCA_46470 PF03466 LysR substrate binding domain AvCA_46500 PF05426 Alginate lyase AvCA_46500 PF07940 Heparinase II/III-like protein AvCA_46520 PF04116 Fatty acid hydroxylase superfamily AvCA_46550 PF00072 Response regulator receiver domain AvCA_46550 PF00486 Transcriptional regulatory protein, C terminal AvCA_46560 PF00672 HAMP domain AvCA_46560 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AvCA_46560 PF00512 His Kinase A (phospho-acceptor) domain AvCA_46590 PF03328 HpcH/HpaI aldolase/citrate lyase family AvCA_46620 PF09957 Bacterial antitoxin of type II TA system, VapB AvCA_46640 PF00425 chorismate binding enzyme AvCA_46640 PF04715 Anthranilate synthase component I, N terminal region AvCA_46650 PF13419 Haloacid dehalogenase-like hydrolase AvCA_46660 PF00834 Ribulose-phosphate 3 epimerase family AvCA_46670 PF00202 Aminotransferase class-III AvCA_46680 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AvCA_46680 PF03466 LysR substrate binding domain AvCA_46700 PF18317 Shikimate 5'-dehydrogenase C-terminal domain AvCA_46700 PF01488 Shikimate / quinate 5-dehydrogenase AvCA_46700 PF08501 Shikimate dehydrogenase substrate binding domain AvCA_46710 PF07690 Major Facilitator Superfamily AvCA_46710 PF00083 Sugar (and other) transporter AvCA_46740 PF07690 Major Facilitator Superfamily AvCA_46770 PF05099 Tellurite resistance protein TerB AvCA_46770 PF00226 DnaJ domain AvCA_46780 PF00483 Nucleotidyl transferase AvCA_46790 PF01636 Phosphotransferase enzyme family AvCA_46800 PF03968 OstA-like protein AvCA_46800 PF04453 LPS transport system D AvCA_46810 PF09312 SurA N-terminal domain AvCA_46810 PF00639 PPIC-type PPIASE domain AvCA_46820 PF04166 Pyridoxal phosphate biosynthetic protein PdxA AvCA_46830 PF00398 Ribosomal RNA adenine dimethylase AvCA_46840 PF04379 ApaG domain AvCA_46850 PF00149 Calcineurin-like phosphoesterase AvCA_46860 PF00581 Rhodanese-like domain AvCA_46870 PF08298 PrkA AAA domain AvCA_46870 PF06798 PrkA serine protein kinase C-terminal domain AvCA_46880 PF04285 Protein of unknown function (DUF444) AvCA_46890 PF04293 SpoVR like protein AvCA_46900 PF01966 HD domain AvCA_46900 PF01743 Poly A polymerase head domain AvCA_46900 PF12627 Probable RNA and SrmB- binding site of polymerase A AvCA_46910 PF00753 Metallo-beta-lactamase superfamily AvCA_46920 PF01740 STAS domain AvCA_46920 PF00916 Sulfate permease family AvCA_46930 PF00581 Rhodanese-like domain AvCA_46950 PF02152 Dihydroneopterin aldolase AvCA_46960 PF02660 Glycerol-3-phosphate acyltransferase AvCA_46970 PF00814 Glycoprotease family AvCA_46980 PF01165 Ribosomal protein S21 AvCA_46990 PF08278 DNA primase DnaG DnaB-binding AvCA_46990 PF08275 DNA primase catalytic core, N-terminal domain AvCA_46990 PF13662 Toprim domain AvCA_46990 PF01807 CHC2 zinc finger AvCA_46990 PF10410 DnaB-helicase binding domain of primase AvCA_47000 PF04539 Sigma-70 region 3 AvCA_47000 PF04545 Sigma-70, region 4 AvCA_47000 PF04546 Sigma-70, non-essential region AvCA_47000 PF03979 Sigma-70 factor, region 1.1 AvCA_47000 PF00140 Sigma-70 factor, region 1.2 AvCA_47000 PF04542 Sigma-70 region 2 AvCA_47010 PF13545 Crp-like helix-turn-helix domain AvCA_47010 PF00027 Cyclic nucleotide-binding domain AvCA_47040 PF04536 TPM domain AvCA_47060 PF07995 Glucose / Sorbosone dehydrogenase AvCA_47070 PF00994 Probable molybdopterin binding domain AvCA_47070 PF02464 Competence-damaged protein AvCA_47070 PF18146 Damage-inducible protein CinA KH domain AvCA_47080 PF05067 Manganese containing catalase AvCA_47100 PF01590 GAF domain AvCA_47100 PF02954 Bacterial regulatory protein, Fis family AvCA_47100 PF00158 Sigma-54 interaction domain AvCA_47160 PF00005 ABC transporter AvCA_47170 PF04542 Sigma-70 region 2 AvCA_47170 PF08281 Sigma-70, region 4 AvCA_47180 PF16220 Domain of unknown function (DUF4880) AvCA_47180 PF04773 FecR protein AvCA_47190 PF07715 TonB-dependent Receptor Plug Domain AvCA_47190 PF07660 Secretin and TonB N terminus short domain AvCA_47190 PF00593 TonB dependent receptor AvCA_47210 PF08386 TAP-like protein AvCA_47210 PF00561 alpha/beta hydrolase fold AvCA_47250 PF00881 Nitroreductase family AvCA_47260 PF02347 Glycine cleavage system P-protein AvCA_47270 PF01597 Glycine cleavage H-protein AvCA_47280 PF08669 Glycine cleavage T-protein C-terminal barrel domain AvCA_47280 PF01571 Aminomethyltransferase folate-binding domain AvCA_47290 PF00528 Binding-protein-dependent transport system inner membrane component AvCA_47310 PF01494 FAD binding domain AvCA_47320 PF01494 FAD binding domain AvCA_47330 PF00557 Metallopeptidase family M24 AvCA_47330 PF05195 Aminopeptidase P, N-terminal domain AvCA_47340 PF03695 Uncharacterised protein family (UPF0149) AvCA_47360 PF05164 Cell division protein ZapA AvCA_47370 PF01812 5-formyltetrahydrofolate cyclo-ligase family AvCA_47390 PF00111 2Fe-2S iron-sulfur cluster binding domain AvCA_47390 PF00175 Oxidoreductase NAD-binding domain AvCA_47390 PF00970 Oxidoreductase FAD-binding domain AvCA_47400 PF01977 3-octaprenyl-4-hydroxybenzoate carboxy-lyase AvCA_47410 PF07498 Rho termination factor, N-terminal domain AvCA_47410 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain AvCA_47410 PF07497 Rho termination factor, RNA-binding domain AvCA_47420 PF00085 Thioredoxin AvCA_47430 PF02541 Ppx/GppA phosphatase family AvCA_47440 PF02503 Polyphosphate kinase middle domain AvCA_47440 PF17941 Polyphosphate kinase C-terminal domain 1 AvCA_47440 PF13089 Polyphosphate kinase N-terminal domain AvCA_47440 PF13090 Polyphosphate kinase C-terminal domain 2 AvCA_47450 PF00490 Delta-aminolevulinic acid dehydratase AvCA_47470 PF02639 Uncharacterized BCR, YaiI/YqxD family COG1671 AvCA_47490 PF02421 Ferrous iron transport protein B AvCA_47490 PF07670 Nucleoside recognition AvCA_47490 PF07664 Ferrous iron transport protein B C terminus AvCA_47510 PF03741 Integral membrane protein TerC family AvCA_47520 PF12848 ABC transporter AvCA_47520 PF00005 ABC transporter AvCA_47550 PF04353 Regulator of RNA polymerase sigma(70) subunit, Rsd/AlgQ AvCA_47560 PF02600 Disulfide bond formation protein DsbB AvCA_47590 PF02602 Uroporphyrinogen-III synthase HemD AvCA_47600 PF03900 Porphobilinogen deaminase, C-terminal domain AvCA_47600 PF01379 Porphobilinogen deaminase, dipyromethane cofactor binding domain AvCA_47610 PF00072 Response regulator receiver domain AvCA_47610 PF04397 LytTr DNA-binding domain AvCA_47620 PF00206 Lyase AvCA_47620 PF14698 Argininosuccinate lyase C-terminal AvCA_47640 PF01544 CorA-like Mg2+ transporter protein AvCA_47670 PF01491 Frataxin-like domain AvCA_47690 PF13627 Prokaryotic lipoprotein-attachment site AvCA_47700 PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain AvCA_47700 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain AvCA_47710 PF01678 Diaminopimelate epimerase AvCA_47730 PF02899 Phage integrase, N-terminal SAM-like domain AvCA_47730 PF00589 Phage integrase family AvCA_47770 PF01894 Uncharacterised protein family UPF0047 AvCA_47780 PF00909 Ammonium Transporter Family AvCA_47790 PF00543 Nitrogen regulatory protein P-II AvCA_47800 PF04380 Membrane fusogenic activity AvCA_47810 PF13335 Magnesium chelatase, subunit ChlI C-terminal AvCA_47810 PF01078 Magnesium chelatase, subunit ChlI AvCA_47830 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AvCA_47830 PF03466 LysR substrate binding domain AvCA_47850 PF02678 Pirin AvCA_47850 PF17954 Quercetinase C-terminal cupin domain AvCA_47860 PF00580 UvrD/REP helicase N-terminal domain AvCA_47860 PF13361 UvrD-like helicase C-terminal domain AvCA_47920 PF00199 Catalase AvCA_47930 PF00156 Phosphoribosyl transferase domain AvCA_47940 PF13442 Cytochrome C oxidase, cbb3-type, subunit III AvCA_47960 PF00842 Alanine racemase, C-terminal domain AvCA_47960 PF01168 Alanine racemase, N-terminal domain AvCA_47980 PF01266 FAD dependent oxidoreductase AvCA_48000 PF01037 Lrp/AsnC ligand binding domain AvCA_48010 PF01266 FAD dependent oxidoreductase AvCA_48030 PF00171 Aldehyde dehydrogenase family AvCA_48040 PF00471 Ribosomal protein L33 AvCA_48050 PF00830 Ribosomal L28 family AvCA_48060 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle AvCA_48070 PF04545 Sigma-70, region 4 AvCA_48070 PF00140 Sigma-70 factor, region 1.2 AvCA_48070 PF04542 Sigma-70 region 2 AvCA_48080 PF18075 FtsX extracellular domain AvCA_48090 PF00005 ABC transporter AvCA_48100 PF00448 SRP54-type protein, GTPase domain AvCA_48100 PF02881 SRP54-type protein, helical bundle domain AvCA_48110 PF00186 Dihydrofolate reductase AvCA_48120 PF03009 Glycerophosphoryl diester phosphodiesterase family AvCA_48140 PF01926 50S ribosome-binding GTPase AvCA_48140 PF12631 MnmE helical domain AvCA_48140 PF10396 GTP-binding protein TrmE N-terminus AvCA_48150 PF00892 EamA-like transporter family AvCA_48160 PF00155 Aminotransferase class I and II AvCA_48160 PF00392 Bacterial regulatory proteins, gntR family AvCA_48170 PF00303 Thymidylate synthase AvCA_48180 PF01790 Prolipoprotein diacylglyceryl transferase AvCA_48190 PF01925 Sulfite exporter TauE/SafE AvCA_48220 PF17158 Membrane-associated sensor, integral membrane domain AvCA_48220 PF00990 Diguanylate cyclase, GGDEF domain AvCA_48230 PF00391 PEP-utilising enzyme, mobile domain AvCA_48230 PF05524 PEP-utilising enzyme, N-terminal AvCA_48230 PF01590 GAF domain AvCA_48230 PF02896 PEP-utilising enzyme, TIM barrel domain AvCA_48240 PF00293 NUDIX domain AvCA_48270 PF00585 C-terminal regulatory domain of Threonine dehydratase AvCA_48270 PF00291 Pyridoxal-phosphate dependent enzyme AvCA_48280 PF06026 Ribose 5-phosphate isomerase A (phosphoriboisomerase A) AvCA_48300 PF01557 Fumarylacetoacetate (FAA) hydrolase family AvCA_48310 PF02913 FAD linked oxidases, C-terminal domain AvCA_48310 PF01565 FAD binding domain AvCA_48330 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain AvCA_48330 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain AvCA_48330 PF01842 ACT domain AvCA_48340 PF03547 Membrane transport protein AvCA_48350 PF05145 Transition state regulatory protein AbrB AvCA_48440 PF03466 LysR substrate binding domain AvCA_48440 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AvCA_48450 PF00270 DEAD/DEAH box helicase AvCA_48450 PF00271 Helicase conserved C-terminal domain AvCA_48450 PF17191 RecG wedge domain AvCA_48480 PF00216 Bacterial DNA-binding protein AvCA_48490 PF00301 Rubredoxin AvCA_48500 PF04345 Chorismate lyase AvCA_48510 PF01040 UbiA prenyltransferase family AvCA_48520 PF00486 Transcriptional regulatory protein, C terminal AvCA_48520 PF00072 Response regulator receiver domain AvCA_48530 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AvCA_48530 PF00512 His Kinase A (phospho-acceptor) domain AvCA_48530 PF11808 Phosphate regulon sensor protein PhoR AvCA_48530 PF00989 PAS fold AvCA_48540 PF01595 Cyclin M transmembrane N-terminal domain AvCA_48540 PF03471 Transporter associated domain AvCA_48540 PF00571 CBS domain AvCA_48550 PF01476 LysM domain AvCA_48550 PF08525 Opacity-associated protein A N-terminal motif AvCA_48550 PF01551 Peptidase family M23 AvCA_48560 PF01895 PhoU domain AvCA_48570 PF00005 ABC transporter AvCA_48580 PF00528 Binding-protein-dependent transport system inner membrane component AvCA_48590 PF00528 Binding-protein-dependent transport system inner membrane component AvCA_48600 PF12849 PBP superfamily domain AvCA_48610 PF03061 Thioesterase superfamily AvCA_48620 PF01263 Aldose 1-epimerase AvCA_48650 PF00691 OmpA family AvCA_48650 PF04972 BON domain AvCA_48660 PF05958 tRNA (Uracil-5-)-methyltransferase AvCA_48690 PF00581 Rhodanese-like domain AvCA_48700 PF04055 Radical SAM superfamily AvCA_48700 PF02579 Dinitrogenase iron-molybdenum cofactor AvCA_48730 PF00528 Binding-protein-dependent transport system inner membrane component AvCA_48740 PF00528 Binding-protein-dependent transport system inner membrane component AvCA_48750 PF08402 TOBE domain AvCA_48750 PF00005 ABC transporter AvCA_48760 PF13416 Bacterial extracellular solute-binding protein AvCA_48780 PF02371 Transposase IS116/IS110/IS902 family AvCA_48780 PF01548 Transposase AvCA_48790 PF13847 Methyltransferase domain AvCA_48840 PF06296 RelE toxin of RelE / RelB toxin-antitoxin system AvCA_48850 PF00202 Aminotransferase class-III AvCA_48860 PF00120 Glutamine synthetase, catalytic domain AvCA_48870 PF07722 Peptidase C26 AvCA_48880 PF00120 Glutamine synthetase, catalytic domain AvCA_48890 PF00795 Carbon-nitrogen hydrolase AvCA_48900 PF04371 Porphyromonas-type peptidyl-arginine deiminase AvCA_48920 PF03573 outer membrane porin, OprD family AvCA_48930 PF00990 Diguanylate cyclase, GGDEF domain AvCA_48930 PF05230 MASE2 domain AvCA_48970 PF00148 Nitrogenase component 1 type Oxidoreductase AvCA_48980 PF03139 Vanadium/alternative nitrogenase delta subunit AvCA_48990 PF00148 Nitrogenase component 1 type Oxidoreductase AvCA_49000 PF00142 4Fe-4S iron sulfur cluster binding proteins, NifH/frxC family AvCA_49020 PF02954 Bacterial regulatory protein, Fis family AvCA_49020 PF00158 Sigma-54 interaction domain AvCA_49020 PF01590 GAF domain AvCA_49030 PF01106 NifU-like domain AvCA_49060 PF03707 Bacterial signalling protein N terminal repeat AvCA_49060 PF00990 Diguanylate cyclase, GGDEF domain AvCA_49060 PF00563 EAL domain AvCA_49080 PF00171 Aldehyde dehydrogenase family AvCA_49090 PF01322 Cytochrome C' AvCA_49100 PF01292 Prokaryotic cytochrome b561 AvCA_49120 PF00248 Aldo/keto reductase family AvCA_49140 PF03707 Bacterial signalling protein N terminal repeat AvCA_49140 PF00990 Diguanylate cyclase, GGDEF domain AvCA_49140 PF00563 EAL domain AvCA_49180 PF00561 alpha/beta hydrolase fold AvCA_49240 PF07729 FCD domain AvCA_49240 PF00392 Bacterial regulatory proteins, gntR family AvCA_49250 PF00920 Dehydratase family AvCA_49260 PF07690 Major Facilitator Superfamily AvCA_49290 PF00171 Aldehyde dehydrogenase family AvCA_49300 PF03573 outer membrane porin, OprD family AvCA_49310 PF03573 outer membrane porin, OprD family AvCA_49320 PF14698 Argininosuccinate lyase C-terminal AvCA_49320 PF00206 Lyase AvCA_49330 PF00375 Sodium:dicarboxylate symporter family AvCA_49340 PF03466 LysR substrate binding domain AvCA_49340 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AvCA_49350 PF13229 Right handed beta helix region AvCA_49350 PF00353 RTX calcium-binding nonapeptide repeat (4 copies) AvCA_49350 PF12708 Pectate lyase superfamily protein AvCA_49360 PF13229 Right handed beta helix region AvCA_49360 PF00353 RTX calcium-binding nonapeptide repeat (4 copies) AvCA_49360 PF12708 Pectate lyase superfamily protein AvCA_49400 PF13229 Right handed beta helix region AvCA_49400 PF12708 Pectate lyase superfamily protein AvCA_49400 PF00353 RTX calcium-binding nonapeptide repeat (4 copies) AvCA_49440 PF00512 His Kinase A (phospho-acceptor) domain AvCA_49440 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AvCA_49450 PF00072 Response regulator receiver domain AvCA_49450 PF00486 Transcriptional regulatory protein, C terminal AvCA_49480 PF01970 Tripartite tricarboxylate transporter TctA family AvCA_49500 PF05145 Transition state regulatory protein AbrB AvCA_49510 PF00682 HMGL-like AvCA_49520 PF00364 Biotin-requiring enzyme AvCA_49520 PF02785 Biotin carboxylase C-terminal domain AvCA_49520 PF00289 Biotin carboxylase, N-terminal domain AvCA_49520 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain AvCA_49530 PF00378 Enoyl-CoA hydratase/isomerase AvCA_49550 PF01039 Carboxyl transferase domain AvCA_49560 PF02771 Acyl-CoA dehydrogenase, N-terminal domain AvCA_49560 PF02770 Acyl-CoA dehydrogenase, middle domain AvCA_49560 PF00441 Acyl-CoA dehydrogenase, C-terminal domain AvCA_49570 PF13411 MerR HTH family regulatory protein AvCA_49580 PF03573 outer membrane porin, OprD family AvCA_49590 PF03600 Citrate transporter AvCA_49600 PF03741 Integral membrane protein TerC family AvCA_49630 PF00665 Integrase core domain AvCA_49630 PF02796 Helix-turn-helix domain of resolvase AvCA_49640 PF01695 IstB-like ATP binding protein AvCA_49860 PF13340 Putative transposase of IS4/5 family (DUF4096) AvCA_49900 PF03547 Membrane transport protein AvCA_49910 PF00121 Triosephosphate isomerase AvCA_49920 PF01418 Helix-turn-helix domain, rpiR family AvCA_49920 PF01380 SIS domain AvCA_49940 PF00892 EamA-like transporter family AvCA_49950 PF00171 Aldehyde dehydrogenase family AvCA_49960 PF00121 Triosephosphate isomerase AvCA_49970 PF03952 Enolase, N-terminal domain AvCA_49970 PF00113 Enolase, C-terminal TIM barrel domain AvCA_49990 PF02887 Pyruvate kinase, alpha/beta domain AvCA_49990 PF00224 Pyruvate kinase, barrel domain AvCA_50020 PF01418 Helix-turn-helix domain, rpiR family AvCA_50020 PF01380 SIS domain AvCA_50040 PF00294 pfkB family carbohydrate kinase AvCA_50050 PF01261 Xylose isomerase-like TIM barrel AvCA_50060 PF04962 KduI/IolB family AvCA_50070 PF00083 Sugar (and other) transporter AvCA_50080 PF00171 Aldehyde dehydrogenase family AvCA_50100 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain AvCA_50100 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain AvCA_50100 PF00205 Thiamine pyrophosphate enzyme, central domain AvCA_50110 PF02894 Oxidoreductase family, C-terminal alpha/beta domain AvCA_50110 PF01408 Oxidoreductase family, NAD-binding Rossmann fold AvCA_50120 PF01261 Xylose isomerase-like TIM barrel AvCA_50130 PF13407 Periplasmic binding protein domain AvCA_50140 PF13407 Periplasmic binding protein domain AvCA_50150 PF01408 Oxidoreductase family, NAD-binding Rossmann fold AvCA_50150 PF02894 Oxidoreductase family, C-terminal alpha/beta domain AvCA_50160 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AvCA_50160 PF03466 LysR substrate binding domain AvCA_50170 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily AvCA_50180 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily AvCA_50200 PF02798 Glutathione S-transferase, N-terminal domain AvCA_50200 PF14497 Glutathione S-transferase, C-terminal domain AvCA_50210 PF02264 LamB porin AvCA_50220 PF00356 Bacterial regulatory proteins, lacI family AvCA_50220 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family AvCA_50260 PF02894 Oxidoreductase family, C-terminal alpha/beta domain AvCA_50260 PF01408 Oxidoreductase family, NAD-binding Rossmann fold AvCA_50270 PF02264 LamB porin AvCA_50290 PF01408 Oxidoreductase family, NAD-binding Rossmann fold AvCA_50300 PF02653 Branched-chain amino acid transport system / permease component AvCA_50310 PF00005 ABC transporter AvCA_50320 PF13407 Periplasmic binding protein domain AvCA_50330 PF00005 ABC transporter AvCA_50340 PF01497 Periplasmic binding protein AvCA_50350 PF01032 FecCD transport family AvCA_50370 PF00668 Condensation domain AvCA_50370 PF13193 AMP-binding enzyme C-terminal domain AvCA_50370 PF00501 AMP-binding enzyme AvCA_50370 PF00550 Phosphopantetheine attachment site AvCA_50400 PF04955 HupE / UreJ protein AvCA_50440 PF02769 AIR synthase related protein, C-terminal domain AvCA_50440 PF00586 AIR synthase related protein, N-terminal domain AvCA_50450 PF01924 Hydrogenase formation hypA family AvCA_50460 PF01455 HupF/HypC family AvCA_50470 PF00708 Acylphosphatase AvCA_50470 PF07503 HypF finger AvCA_50470 PF01300 Telomere recombination AvCA_50470 PF17788 HypF Kae1-like domain AvCA_50480 PF02492 CobW/HypB/UreG, nucleotide-binding domain AvCA_50490 PF01155 Hydrogenase/urease nickel incorporation, metallochaperone, hypA AvCA_50500 PF00374 Nickel-dependent hydrogenase AvCA_50510 PF11939 [NiFe]-hydrogenase assembly, chaperone, HybE AvCA_50520 PF00301 Rubredoxin AvCA_50530 PF04809 HupH hydrogenase expression protein, C-terminal conserved region AvCA_50540 PF07449 Hydrogenase-1 expression protein HyaE AvCA_50550 PF01455 HupF/HypC family AvCA_50560 PF01750 Hydrogenase maturation protease AvCA_50570 PF01292 Prokaryotic cytochrome b561 AvCA_50580 PF00374 Nickel-dependent hydrogenase AvCA_50590 PF01058 NADH ubiquinone oxidoreductase, 20 Kd subunit AvCA_50590 PF14720 NiFe/NiFeSe hydrogenase small subunit C-terminal AvCA_50600 PF00665 Integrase core domain AvCA_50610 PF08946 Osmosensory transporter coiled coil AvCA_50610 PF00083 Sugar (and other) transporter AvCA_50630 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) AvCA_50630 PF00072 Response regulator receiver domain AvCA_50630 PF00672 HAMP domain AvCA_50630 PF01627 Hpt domain AvCA_50630 PF00512 His Kinase A (phospho-acceptor) domain AvCA_50630 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AvCA_50640 PF00072 Response regulator receiver domain AvCA_50650 PF00005 ABC transporter AvCA_50650 PF03459 TOBE domain AvCA_50660 PF00528 Binding-protein-dependent transport system inner membrane component AvCA_50680 PF03459 TOBE domain AvCA_50680 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AvCA_50690 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AvCA_50690 PF03459 TOBE domain AvCA_50700 PF00005 ABC transporter AvCA_50700 PF03459 TOBE domain AvCA_50720 PF00528 Binding-protein-dependent transport system inner membrane component AvCA_50860 PF17871 AAA lid domain AvCA_50860 PF07724 AAA domain (Cdc48 subfamily) AvCA_50860 PF10431 C-terminal, D2-small domain, of ClpB protein AvCA_50860 PF00004 ATPase family associated with various cellular activities (AAA) AvCA_50870 PF04717 Type VI secretion system, phage-baseplate injector AvCA_50910 PF16844 Dinitrogenase iron-molybdenum cofactor, N-terminal AvCA_50910 PF02579 Dinitrogenase iron-molybdenum cofactor AvCA_50920 PF03658 RnfH family Ubiquitin AvCA_50930 PF02508 Rnf-Nqr subunit, membrane protein AvCA_50940 PF04205 FMN-binding domain AvCA_50950 PF03116 NQR2, RnfD, RnfE family AvCA_50960 PF13375 RnfC Barrel sandwich hybrid domain AvCA_50960 PF10531 SLBB domain AvCA_50960 PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit AvCA_50960 PF13237 4Fe-4S dicluster domain AvCA_50970 PF04060 Putative Fe-S cluster AvCA_50980 PF02508 Rnf-Nqr subunit, membrane protein AvCA_50990 PF00989 PAS fold AvCA_50990 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AvCA_51000 PF13185 GAF domain AvCA_51000 PF02954 Bacterial regulatory protein, Fis family AvCA_51000 PF00158 Sigma-54 interaction domain AvCA_51010 PF02579 Dinitrogenase iron-molybdenum cofactor AvCA_51010 PF04055 Radical SAM superfamily AvCA_51020 PF12838 4Fe-4S dicluster domain AvCA_51040 PF04891 NifQ AvCA_51060 PF00462 Glutaredoxin AvCA_51080 PF02954 Bacterial regulatory protein, Fis family AvCA_51080 PF00158 Sigma-54 interaction domain AvCA_51090 PF00175 Oxidoreductase NAD-binding domain AvCA_51090 PF00042 Globin AvCA_51090 PF00970 Oxidoreductase FAD-binding domain AvCA_51100 PF00005 ABC transporter AvCA_51100 PF00571 CBS domain AvCA_51110 PF01226 Formate/nitrite transporter AvCA_51130 PF07690 Major Facilitator Superfamily AvCA_51150 PF03466 LysR substrate binding domain AvCA_51150 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AvCA_51170 PF13229 Right handed beta helix region AvCA_51170 PF12708 Pectate lyase superfamily protein AvCA_51170 PF00353 RTX calcium-binding nonapeptide repeat (4 copies) AvCA_51180 PF00353 RTX calcium-binding nonapeptide repeat (4 copies) AvCA_51180 PF12708 Pectate lyase superfamily protein AvCA_51180 PF13229 Right handed beta helix region AvCA_51190 PF12708 Pectate lyase superfamily protein AvCA_51190 PF13229 Right handed beta helix region AvCA_51190 PF00353 RTX calcium-binding nonapeptide repeat (4 copies) AvCA_51200 PF12708 Pectate lyase superfamily protein AvCA_51200 PF00353 RTX calcium-binding nonapeptide repeat (4 copies) AvCA_51230 PF13229 Right handed beta helix region AvCA_51230 PF00353 RTX calcium-binding nonapeptide repeat (4 copies) AvCA_51230 PF12708 Pectate lyase superfamily protein AvCA_51240 PF13229 Right handed beta helix region AvCA_51240 PF12708 Pectate lyase superfamily protein AvCA_51240 PF00353 RTX calcium-binding nonapeptide repeat (4 copies) AvCA_51250 PF08548 Peptidase M10 serralysin C terminal AvCA_51250 PF12708 Pectate lyase superfamily protein AvCA_51250 PF00353 RTX calcium-binding nonapeptide repeat (4 copies) AvCA_51290 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain AvCA_51290 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain AvCA_51300 PF07690 Major Facilitator Superfamily AvCA_51310 PF07690 Major Facilitator Superfamily AvCA_51320 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain AvCA_51320 PF13378 Enolase C-terminal domain-like AvCA_51330 PF01081 KDPG and KHG aldolase AvCA_51350 PF01614 Bacterial transcriptional regulator AvCA_51350 PF09339 IclR helix-turn-helix domain AvCA_51360 PF00224 Pyruvate kinase, barrel domain AvCA_51360 PF02887 Pyruvate kinase, alpha/beta domain AvCA_51390 PF02264 LamB porin AvCA_51400 PF12833 Helix-turn-helix domain AvCA_51410 PF16874 Glycosyl hydrolase family 36 C-terminal domain AvCA_51410 PF16875 Glycosyl hydrolase family 36 N-terminal domain AvCA_51420 PF11975 Family 4 glycosyl hydrolase C-terminal domain AvCA_51420 PF02056 Family 4 glycosyl hydrolase AvCA_51430 PF01306 LacY proton/sugar symporter AvCA_51450 PF08450 SMP-30/Gluconolactonase/LRE-like region AvCA_51470 PF00128 Alpha amylase, catalytic domain AvCA_51490 PF12804 MobA-like NTP transferase domain AvCA_51490 PF14602 Hexapeptide repeat of succinyl-transferase AvCA_51490 PF00132 Bacterial transferase hexapeptide (six repeats) AvCA_51510 PF11471 Maltoporin periplasmic N-terminal extension AvCA_51510 PF02264 LamB porin AvCA_51520 PF00248 Aldo/keto reductase family AvCA_51530 PF09339 IclR helix-turn-helix domain AvCA_51530 PF01614 Bacterial transcriptional regulator AvCA_51550 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion AvCA_51550 PF00529 HlyD membrane-fusion protein of T1SS AvCA_51560 PF00873 AcrB/AcrD/AcrF family AvCA_51570 PF02321 Outer membrane efflux protein AvCA_51580 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain AvCA_51580 PF18321 3-hydroxybutyryl-CoA dehydrogenase reduced Rossmann-fold domain AvCA_51580 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain AvCA_51590 PF00108 Thiolase, N-terminal domain AvCA_51590 PF02803 Thiolase, C-terminal domain AvCA_51600 PF01144 Coenzyme A transferase AvCA_51610 PF01144 Coenzyme A transferase AvCA_51620 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AvCA_51620 PF03466 LysR substrate binding domain AvCA_51650 PF01569 PAP2 superfamily AvCA_51660 PF00990 Diguanylate cyclase, GGDEF domain AvCA_51660 PF03707 Bacterial signalling protein N terminal repeat AvCA_51660 PF00563 EAL domain AvCA_51670 PF02203 Tar ligand binding domain homologue AvCA_51670 PF00672 HAMP domain AvCA_51670 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain AvCA_51690 PF04480 Protein of unknown function (DUF559) AvCA_51700 PF13538 UvrD-like helicase C-terminal domain AvCA_51710 PF13361 UvrD-like helicase C-terminal domain AvCA_51710 PF12705 PD-(D/E)XK nuclease superfamily AvCA_51710 PF00580 UvrD/REP helicase N-terminal domain AvCA_51720 PF17946 RecC C-terminal domain AvCA_51740 PF06965 Na+/H+ antiporter 1 AvCA_51760 PF03006 Haemolysin-III related AvCA_51780 PF14509 Glycosyl-hydrolase 97 C-terminal, oligomerisation AvCA_51780 PF14508 Glycosyl-hydrolase 97 N-terminal AvCA_51780 PF10566 Glycoside hydrolase 97 AvCA_51790 PF11471 Maltoporin periplasmic N-terminal extension AvCA_51790 PF02264 LamB porin AvCA_51800 PF01306 LacY proton/sugar symporter AvCA_51810 PF08244 Glycosyl hydrolases family 32 C terminal AvCA_51810 PF00251 Glycosyl hydrolases family 32 N-terminal domain AvCA_51820 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family AvCA_51820 PF00356 Bacterial regulatory proteins, lacI family AvCA_51850 PF00440 Bacterial regulatory proteins, tetR family AvCA_51890 PF01380 SIS domain AvCA_51900 PF00455 DeoR C terminal sensor domain AvCA_51900 PF08220 DeoR-like helix-turn-helix domain AvCA_51920 PF12804 MobA-like NTP transferase domain AvCA_51920 PF14602 Hexapeptide repeat of succinyl-transferase AvCA_51920 PF00132 Bacterial transferase hexapeptide (six repeats) AvCA_51930 PF00593 TonB dependent receptor AvCA_51930 PF07715 TonB-dependent Receptor Plug Domain AvCA_51950 PF00528 Binding-protein-dependent transport system inner membrane component AvCA_51960 PF12911 N-terminal TM domain of oligopeptide transport permease C AvCA_51960 PF00528 Binding-protein-dependent transport system inner membrane component AvCA_51970 PF08352 Oligopeptide/dipeptide transporter, C-terminal region AvCA_51970 PF00005 ABC transporter AvCA_52010 PF03781 Sulfatase-modifying factor enzyme 1 AvCA_52030 PF09383 NIL domain AvCA_52030 PF00005 ABC transporter AvCA_52120 PF07715 TonB-dependent Receptor Plug Domain AvCA_52120 PF00593 TonB dependent receptor AvCA_52150 PF00401 ATP synthase, Delta/Epsilon chain, long alpha-helix domain AvCA_52150 PF02823 ATP synthase, Delta/Epsilon chain, beta-sandwich domain AvCA_52160 PF02874 ATP synthase alpha/beta family, beta-barrel domain AvCA_52160 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain AvCA_52170 PF00231 ATP synthase AvCA_52180 PF02874 ATP synthase alpha/beta family, beta-barrel domain AvCA_52180 PF00306 ATP synthase alpha/beta chain, C terminal domain AvCA_52180 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain AvCA_52190 PF00213 ATP synthase delta (OSCP) subunit AvCA_52200 PF00430 ATP synthase B/B' CF(0) AvCA_52210 PF00137 ATP synthase subunit C AvCA_52220 PF00119 ATP synthase A chain AvCA_52230 PF03899 ATP synthase I chain AvCA_52240 PF17762 HTH domain found in ParB protein AvCA_52240 PF02195 ParB-like nuclease domain AvCA_52250 PF13614 AAA domain AvCA_52260 PF02527 rRNA small subunit methyltransferase G AvCA_52270 PF01134 Glucose inhibited division protein A AvCA_52270 PF13932 GidA associated domain AvCA_52350 PF01555 DNA methylase AvCA_52390 PF00176 SNF2 family N-terminal domain AvCA_52390 PF00271 Helicase conserved C-terminal domain AvCA_52440 PF01926 50S ribosome-binding GTPase AvCA_52440 PF12631 MnmE helical domain AvCA_52440 PF10396 GTP-binding protein TrmE N-terminus AvCA_52450 PF14849 YidC periplasmic domain AvCA_52450 PF02096 60Kd inner membrane protein AvCA_52460 PF01809 Putative membrane protein insertion efficiency factor AvCA_52470 PF00825 Ribonuclease P AvCA_52480 PF00468 Ribosomal protein L34