CX649_00015	SM00345	helix_turn_helix gluconate operon transcriptional repressor
CX649_00020	SM00796	Allophanate hydrolase subunit 1
CX649_00025	SM00797	Allophanate hydrolase subunit 2
CX649_00035	SM00878	Biotin carboxylase C-terminal domain
CX649_00090	SM00382	ATPases associated with a variety of cellular activities
CX649_00120	SM00382	ATPases associated with a variety of cellular activities
CX649_00135	SM00710	Parallel beta-helix repeats
CX649_00140	SM00448	cheY-homologous receiver domain
CX649_00140	SM00862	Transcriptional regulatory protein, C terminal
CX649_00145	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
CX649_00145	SM00387	Histidine kinase-like ATPases
CX649_00145	SM00388	His Kinase A (phosphoacceptor) domain
CX649_00190	SM00849	Metallo-beta-lactamase superfamily
CX649_00230	SM00829	Enoylreductase
CX649_00235	SM01007	Class II Aldolase and Adducin N-terminal domain
CX649_00255	SM00382	ATPases associated with a variety of cellular activities
CX649_00325	SM00903	Flavin reductase like domain
CX649_00335	SM01130	CX649_00335
CX649_00360	SM00345	helix_turn_helix gluconate operon transcriptional repressor
CX649_00360	SM00895	CX649_00360
CX649_00380	SM00382	ATPases associated with a variety of cellular activities
CX649_00385	SM00382	ATPases associated with a variety of cellular activities
CX649_00405	SM00989	CX649_00405
CX649_00450	SM00460	Transglutaminase/protease-like homologues
CX649_00465	SM01001	AIR carboxylase
CX649_00475	SM00998	Adenylosuccinate lyase C-terminus
CX649_00490	SM01211	CX649_00490
CX649_00515	SM00798	AICARFT/IMPCHase bienzyme
CX649_00515	SM00851	MGS-like domain
CX649_00520	SM01209	CX649_00520
CX649_00520	SM01210	CX649_00520
CX649_00550	SM00278	Helix-hairpin-helix DNA-binding motif class 1
CX649_00550	SM00292	breast cancer carboxy-terminal domain
CX649_00550	SM00532	Ligase N family
CX649_00575	SM00845	GatB domain
CX649_00580	SM00046	Diacylglycerol kinase catalytic domain (presumed)
CX649_00620	SM00487	DEAD-like helicases superfamily
CX649_00745	SM00487	DEAD-like helicases superfamily
CX649_00880	SM01002	Alanine dehydrogenase/PNT, C-terminal domain
CX649_00880	SM01003	Alanine dehydrogenase/PNT, N-terminal domain
CX649_00895	SM00382	ATPases associated with a variety of cellular activities
CX649_00900	SM00725	NEAr Transporter domain
CX649_00905	SM00725	NEAr Transporter domain
CX649_00920	SM00382	ATPases associated with a variety of cellular activities
CX649_00940	SM00382	ATPases associated with a variety of cellular activities
CX649_00955	SM00382	ATPases associated with a variety of cellular activities
CX649_00965	SM00062	Bacterial periplasmic substrate-binding proteins
CX649_00965	SM00079	Eukaryotic homologues of bacterial periplasmic substrate binding proteins.
CX649_00980	SM00487	DEAD-like helicases superfamily
CX649_00980	SM00490	helicase superfamily c-terminal domain
CX649_01015	SM00283	Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer).
CX649_01015	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
CX649_01050	SM00530	Helix-turn-helix XRE-family like proteins 
CX649_01055	SM00382	ATPases associated with a variety of cellular activities
CX649_01085	SM01060	CX649_01085
CX649_01090	SM00382	ATPases associated with a variety of cellular activities
CX649_01095	SM00382	ATPases associated with a variety of cellular activities
CX649_01120	SM00382	ATPases associated with a variety of cellular activities
CX649_01155	SM00382	ATPases associated with a variety of cellular activities
CX649_01185	SM00062	Bacterial periplasmic substrate-binding proteins
CX649_01190	SM00382	ATPases associated with a variety of cellular activities
CX649_01215	SM00244	prohibitin homologues
CX649_01225	SM00345	helix_turn_helix gluconate operon transcriptional repressor
CX649_01235	SM00922	Mandelate racemase / muconate lactonizing enzyme, C-terminal domain
CX649_01270	SM00226	Low molecular weight phosphatase family
CX649_01340	SM01007	Class II Aldolase and Adducin N-terminal domain
CX649_01380	SM00478	endonuclease III
CX649_01470	SM00422	helix_turn_helix, mercury resistance
CX649_01540	SM00228	Domain present in PSD-95, Dlg, and ZO-1/2.
CX649_01570	SM00359	Putative RNA-binding Domain in PseudoUridine synthase and Archaeosine transglycosylase
CX649_01620	SM00471	Metal dependent phosphohydrolases with conserved 'HD' motif.
CX649_01650	SM00347	helix_turn_helix multiple antibiotic resistance protein
CX649_01685	SM00382	ATPases associated with a variety of cellular activities
CX649_01715	SM00354	helix_turn _helix lactose operon repressor
CX649_01725	SM00849	Metallo-beta-lactamase superfamily
CX649_01740	SM00382	ATPases associated with a variety of cellular activities
CX649_01745	SM00530	Helix-turn-helix XRE-family like proteins 
CX649_01765	SM00382	ATPases associated with a variety of cellular activities
CX649_01765	SM00843	CX649_01765
CX649_01790	SM00830	Chorismate mutase type II
CX649_01795	SM00354	helix_turn _helix lactose operon repressor
CX649_01805	SM00116	Domain in cystathionine beta-synthase and other proteins.
CX649_01830	SM00363	S4 RNA-binding domain
CX649_01900	SM00797	Allophanate hydrolase subunit 2
CX649_01910	SM00796	Allophanate hydrolase subunit 1
CX649_01955	SM00382	ATPases associated with a variety of cellular activities
CX649_02025	SM00283	Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer).
CX649_02025	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
CX649_02030	SM00226	Low molecular weight phosphatase family
CX649_02060	SM00937	CX649_02060
CX649_02085	SM00357	Cold shock protein domain
CX649_02085	SM00382	ATPases associated with a variety of cellular activities
CX649_02085	SM00959	Rho termination factor, N-terminal domain
CX649_02110	SM00448	cheY-homologous receiver domain
CX649_02145	SM00836	DALR anticodon binding domain
CX649_02145	SM01016	Arginyl tRNA synthetase N terminal dom
CX649_02190	SM00471	Metal dependent phosphohydrolases with conserved 'HD' motif.
CX649_02320	SM00487	DEAD-like helicases superfamily
CX649_02335	SM00530	Helix-turn-helix XRE-family like proteins 
CX649_02365	SM00228	Domain present in PSD-95, Dlg, and ZO-1/2.
CX649_02370	SM00849	Metallo-beta-lactamase superfamily
CX649_02385	SM00091	PAS domain
CX649_02385	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
CX649_02385	SM00387	Histidine kinase-like ATPases
CX649_02385	SM00388	His Kinase A (phosphoacceptor) domain
CX649_02390	SM00448	cheY-homologous receiver domain
CX649_02390	SM00862	Transcriptional regulatory protein, C terminal
CX649_02405	SM00788	Adenylosuccinate synthetase
CX649_02410	SM00382	ATPases associated with a variety of cellular activities
CX649_02420	SM00267	diguanylate cyclase
CX649_02460	SM00470	ParB-like nuclease domain
CX649_02470	SM00470	ParB-like nuclease domain
CX649_02480	SM01228	CX649_02480
CX649_02490	SM00393	Putative single-stranded nucleic acids-binding domain
CX649_02490	SM01245	CX649_02490
CX649_02510	SM00382	ATPases associated with a variety of cellular activities
CX649_02510	SM00760	Bacterial dnaA protein helix-turn-helix domain
CX649_02520	SM00478	endonuclease III
CX649_02560	SM00382	ATPases associated with a variety of cellular activities
CX649_02560	SM01086	C-terminal, D2-small domain, of ClpB protein
CX649_02565	SM00382	ATPases associated with a variety of cellular activities
CX649_02575	SM00670	Large family of predicted nucleotide-binding domains
CX649_02600	SM00840	CX649_02600
CX649_02605	SM00535	Ribonuclease III family
CX649_02610	SM00967	RNA 2'-O ribose methyltransferase substrate binding
CX649_02635	SM00738	In Spt5p, this domain may confer affinity for Spt4p. It possesses a RNP-like fold.
CX649_02635	SM00739	KOW (Kyprides, Ouzounis, Woese) motif.
CX649_02640	SM00649	Ribosomal protein L11/L12
CX649_02670	SM00663	RNA polymerase I subunit A N-terminus
CX649_02690	SM00838	Elongation factor G C-terminus
CX649_02690	SM00889	Elongation factor G, domain IV
CX649_02700	SM01403	CX649_02700
CX649_02720	SM01382	CX649_02720
CX649_02720	SM01383	CX649_02720
CX649_02735	SM00322	K homology RNA-binding domain
CX649_02755	SM01374	CX649_02755
CX649_02760	SM00739	KOW (Kyprides, Ouzounis, Woese) motif.
CX649_02825	SM00316	Ribosomal protein S1-like RNA-binding domain
CX649_02845	SM00662	RNA polymerases D
CX649_02855	SM00382	ATPases associated with a variety of cellular activities
CX649_02860	SM00382	ATPases associated with a variety of cellular activities
CX649_02900	SM00646	CX649_02900
CX649_02915	SM01251	CX649_02915
CX649_02930	SM00382	ATPases associated with a variety of cellular activities
CX649_02930	SM00930	CX649_02930
CX649_02990	SM00859	Semialdehyde dehydrogenase, NAD binding domain
CX649_03005	SM00346	helix_turn_helix isocitrate lyase regulation
CX649_03020	SM00345	helix_turn_helix gluconate operon transcriptional repressor
CX649_03020	SM00895	CX649_03020
CX649_03040	SM00448	cheY-homologous receiver domain
CX649_03045	SM00387	Histidine kinase-like ATPases
CX649_03060	SM00062	Bacterial periplasmic substrate-binding proteins
CX649_03060	SM00079	Eukaryotic homologues of bacterial periplasmic substrate binding proteins.
CX649_03065	SM00382	ATPases associated with a variety of cellular activities
CX649_03115	SM00382	ATPases associated with a variety of cellular activities
CX649_03125	SM00448	cheY-homologous receiver domain
CX649_03125	SM00862	Transcriptional regulatory protein, C terminal
CX649_03130	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
CX649_03130	SM00387	Histidine kinase-like ATPases
CX649_03130	SM00388	His Kinase A (phosphoacceptor) domain
CX649_03190	SM00487	DEAD-like helicases superfamily
CX649_03190	SM00490	helicase superfamily c-terminal domain
CX649_03220	SM01005	Alanine racemase, C-terminal domain
CX649_03245	SM00387	Histidine kinase-like ATPases
CX649_03250	SM00331	Sigma factor PP2C-like phosphatases
CX649_03270	SM00331	Sigma factor PP2C-like phosphatases
CX649_03275	SM00316	Ribosomal protein S1-like RNA-binding domain
CX649_03275	SM00732	Likely ribonuclease with RNase H fold.
CX649_03285	SM00731	SprT homologues.
CX649_03350	SM00434	DNA Topoisomerase IV
CX649_03355	SM00387	Histidine kinase-like ATPases
CX649_03355	SM00433	TopoisomeraseII
CX649_03360	SM00881	CoA binding domain
CX649_03365	SM01207	CX649_03365
CX649_03370	SM00479	CX649_03370
CX649_03385	SM00854	Bacterial capsule synthesis protein PGA_cap
CX649_03455	SM00448	cheY-homologous receiver domain
CX649_03475	SM00861	Transketolase, pyrimidine binding domain
CX649_03485	SM00857	Resolvase, N terminal domain
CX649_03490	SM00257	Lysin motif
CX649_03500	SM00839	Glutamate/Leucine/Phenylalanine/Valine dehydrogenase
CX649_03505	SM00563	Phosphate acyltransferases
CX649_03530	SM00354	helix_turn _helix lactose operon repressor
CX649_03555	SM00387	Histidine kinase-like ATPases
CX649_03560	SM00421	helix_turn_helix, Lux Regulon
CX649_03560	SM00448	cheY-homologous receiver domain
CX649_03570	SM00283	Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer).
CX649_03570	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
CX649_03570	SM01049	CX649_03570
CX649_03575	SM00052	Putative diguanylate phosphodiesterase
CX649_03580	SM00530	Helix-turn-helix XRE-family like proteins 
CX649_03590	SM00418	helix_turn_helix, Arsenical Resistance Operon Repressor
CX649_03630	SM00448	cheY-homologous receiver domain
CX649_03630	SM00862	Transcriptional regulatory protein, C terminal
CX649_03635	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
CX649_03635	SM00387	Histidine kinase-like ATPases
CX649_03635	SM00388	His Kinase A (phosphoacceptor) domain
CX649_03670	SM00345	helix_turn_helix gluconate operon transcriptional repressor
CX649_03670	SM00895	CX649_03670
CX649_03720	SM00434	DNA Topoisomerase IV
CX649_03725	SM00387	Histidine kinase-like ATPases
CX649_03725	SM00433	TopoisomeraseII
CX649_03730	SM00881	CoA binding domain
CX649_03735	SM01207	CX649_03735
CX649_03740	SM00479	CX649_03740
CX649_03755	SM00854	Bacterial capsule synthesis protein PGA_cap
CX649_03825	SM00448	cheY-homologous receiver domain
CX649_03845	SM00861	Transketolase, pyrimidine binding domain
CX649_03855	SM00857	Resolvase, N terminal domain
CX649_03860	SM00257	Lysin motif
CX649_03870	SM00839	Glutamate/Leucine/Phenylalanine/Valine dehydrogenase
CX649_03875	SM00563	Phosphate acyltransferases
CX649_03900	SM00354	helix_turn _helix lactose operon repressor
CX649_03925	SM00387	Histidine kinase-like ATPases
CX649_03930	SM00421	helix_turn_helix, Lux Regulon
CX649_03930	SM00448	cheY-homologous receiver domain
CX649_03940	SM00283	Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer).
CX649_03940	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
CX649_03940	SM01049	CX649_03940
CX649_03945	SM00052	Putative diguanylate phosphodiesterase
CX649_03950	SM00530	Helix-turn-helix XRE-family like proteins 
CX649_03960	SM00418	helix_turn_helix, Arsenical Resistance Operon Repressor
CX649_04000	SM00448	cheY-homologous receiver domain
CX649_04000	SM00862	Transcriptional regulatory protein, C terminal
CX649_04005	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
CX649_04005	SM00387	Histidine kinase-like ATPases
CX649_04005	SM00388	His Kinase A (phosphoacceptor) domain
CX649_04040	SM00345	helix_turn_helix gluconate operon transcriptional repressor
CX649_04040	SM00895	CX649_04040
CX649_04140	SM00382	ATPases associated with a variety of cellular activities
CX649_04155	SM00835	Cupin
CX649_04160	SM00420	helix_turn_helix, Deoxyribose operon repressor
CX649_04160	SM01134	CX649_04160
CX649_04200	SM00382	ATPases associated with a variety of cellular activities
CX649_04245	SM00345	helix_turn_helix gluconate operon transcriptional repressor
CX649_04245	SM00895	CX649_04245
CX649_04340	SM00345	helix_turn_helix gluconate operon transcriptional repressor
CX649_04340	SM00866	CX649_04340
CX649_04365	SM00382	ATPases associated with a variety of cellular activities
CX649_04380	SM00382	ATPases associated with a variety of cellular activities
CX649_04390	SM00382	ATPases associated with a variety of cellular activities
CX649_04405	SM00481	DNA polymerase alpha chain like domain
CX649_04415	SM00382	ATPases associated with a variety of cellular activities
CX649_04455	SM00382	ATPases associated with a variety of cellular activities
CX649_04470	SM00729	Elongator protein 3, MiaB family, Radical SAM
CX649_04475	SM00852	Probable molybdopterin binding domain
CX649_04490	SM00382	ATPases associated with a variety of cellular activities
CX649_04505	SM00529	Helix-turn-helix diphteria tox regulatory element
CX649_04550	SM00530	Helix-turn-helix XRE-family like proteins 
CX649_04575	SM00858	CX649_04575
CX649_04610	SM00861	Transketolase, pyrimidine binding domain
CX649_04645	SM00448	cheY-homologous receiver domain
CX649_04650	SM00091	PAS domain
CX649_04650	SM00387	Histidine kinase-like ATPases
CX649_04695	SM00984	UDP binding domain
CX649_04730	SM00047	Lysozyme subfamily 2
CX649_04730	SM00287	Bacterial SH3 domain homologues
CX649_04770	SM00387	Histidine kinase-like ATPases
CX649_04775	SM00448	cheY-homologous receiver domain
CX649_04795	SM00028	Tetratricopeptide repeats
CX649_04830	SM00858	CX649_04830
CX649_04855	SM00829	Enoylreductase
CX649_04870	SM00829	Enoylreductase
CX649_04890	SM00257	Lysin motif
CX649_04940	SM01061	CAT RNA binding domain
CX649_04960	SM00062	Bacterial periplasmic substrate-binding proteins
CX649_04970	SM00382	ATPases associated with a variety of cellular activities
CX649_04975	SM00283	Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer).
CX649_04975	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
CX649_04990	SM00796	Allophanate hydrolase subunit 1
CX649_04990	SM00797	Allophanate hydrolase subunit 2
CX649_04990	SM00878	Biotin carboxylase C-terminal domain
CX649_05020	SM00382	ATPases associated with a variety of cellular activities
CX649_05030	SM00283	Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer).
CX649_05035	SM01007	Class II Aldolase and Adducin N-terminal domain
CX649_05040	SM00420	helix_turn_helix, Deoxyribose operon repressor
CX649_05040	SM01134	CX649_05040
CX649_05060	SM00382	ATPases associated with a variety of cellular activities
CX649_05075	SM01007	Class II Aldolase and Adducin N-terminal domain
CX649_05100	SM00882	Coenzyme A transferase
CX649_05105	SM00882	Coenzyme A transferase
CX649_05130	SM00382	ATPases associated with a variety of cellular activities
CX649_05150	SM00506	Appr-1"-p processing enzyme
CX649_05155	SM00382	ATPases associated with a variety of cellular activities
CX649_05180	SM00065	Domain present in phytochromes and cGMP-specific phosphodiesterases.
CX649_05235	SM00346	helix_turn_helix isocitrate lyase regulation
CX649_05240	SM00346	helix_turn_helix isocitrate lyase regulation
CX649_05290	SM00957	SecA DEAD-like domain
CX649_05290	SM00958	SecA preprotein cross-linking domain
CX649_05305	SM00382	ATPases associated with a variety of cellular activities
CX649_05320	SM00228	Domain present in PSD-95, Dlg, and ZO-1/2.
CX649_05320	SM00245	tail specific protease
CX649_05330	SM00346	helix_turn_helix isocitrate lyase regulation
CX649_05335	SM00346	helix_turn_helix isocitrate lyase regulation
CX649_05385	SM00957	SecA DEAD-like domain
CX649_05385	SM00958	SecA preprotein cross-linking domain
CX649_05400	SM00382	ATPases associated with a variety of cellular activities
CX649_05415	SM00228	Domain present in PSD-95, Dlg, and ZO-1/2.
CX649_05415	SM00245	tail specific protease
CX649_05425	SM00346	helix_turn_helix isocitrate lyase regulation
CX649_05430	SM00346	helix_turn_helix isocitrate lyase regulation
CX649_05480	SM00957	SecA DEAD-like domain
CX649_05480	SM00958	SecA preprotein cross-linking domain
CX649_05495	SM00382	ATPases associated with a variety of cellular activities
CX649_05510	SM00228	Domain present in PSD-95, Dlg, and ZO-1/2.
CX649_05510	SM00245	tail specific protease
CX649_05520	SM00346	helix_turn_helix isocitrate lyase regulation
CX649_05525	SM00346	helix_turn_helix isocitrate lyase regulation
CX649_05575	SM00957	SecA DEAD-like domain
CX649_05575	SM00958	SecA preprotein cross-linking domain
CX649_05590	SM00382	ATPases associated with a variety of cellular activities
CX649_05605	SM00228	Domain present in PSD-95, Dlg, and ZO-1/2.
CX649_05605	SM00245	tail specific protease
CX649_05615	SM00346	helix_turn_helix isocitrate lyase regulation
CX649_05620	SM00346	helix_turn_helix isocitrate lyase regulation
CX649_05670	SM00957	SecA DEAD-like domain
CX649_05670	SM00958	SecA preprotein cross-linking domain
CX649_05685	SM00382	ATPases associated with a variety of cellular activities
CX649_05700	SM00228	Domain present in PSD-95, Dlg, and ZO-1/2.
CX649_05700	SM00245	tail specific protease
CX649_05710	SM00346	helix_turn_helix isocitrate lyase regulation
CX649_05715	SM00346	helix_turn_helix isocitrate lyase regulation
CX649_05765	SM00957	SecA DEAD-like domain
CX649_05765	SM00958	SecA preprotein cross-linking domain
CX649_05780	SM00382	ATPases associated with a variety of cellular activities
CX649_05795	SM00228	Domain present in PSD-95, Dlg, and ZO-1/2.
CX649_05795	SM00245	tail specific protease
CX649_05805	SM00346	helix_turn_helix isocitrate lyase regulation
CX649_05810	SM00346	helix_turn_helix isocitrate lyase regulation
CX649_05860	SM00957	SecA DEAD-like domain
CX649_05860	SM00958	SecA preprotein cross-linking domain
CX649_05875	SM00382	ATPases associated with a variety of cellular activities
CX649_05890	SM00228	Domain present in PSD-95, Dlg, and ZO-1/2.
CX649_05890	SM00245	tail specific protease
CX649_05900	SM00346	helix_turn_helix isocitrate lyase regulation
CX649_05905	SM00346	helix_turn_helix isocitrate lyase regulation
CX649_05955	SM00957	SecA DEAD-like domain
CX649_05955	SM00958	SecA preprotein cross-linking domain
CX649_05970	SM00382	ATPases associated with a variety of cellular activities
CX649_05985	SM00228	Domain present in PSD-95, Dlg, and ZO-1/2.
CX649_05985	SM00245	tail specific protease
CX649_06075	SM00028	Tetratricopeptide repeats
CX649_06130	SM00850	LytTr DNA-binding domain
CX649_06220	SM00422	helix_turn_helix, mercury resistance
CX649_06250	SM00382	ATPases associated with a variety of cellular activities
CX649_06300	SM00493	CX649_06300
CX649_06315	SM00382	ATPases associated with a variety of cellular activities
CX649_06315	SM00930	CX649_06315
CX649_06340	SM00382	ATPases associated with a variety of cellular activities
CX649_06370	SM00860	SMI1 / KNR4 family
CX649_06395	SM00729	Elongator protein 3, MiaB family, Radical SAM
CX649_06565	SM00914	CX649_06565
CX649_06665	SM00382	ATPases associated with a variety of cellular activities
CX649_06670	SM00062	Bacterial periplasmic substrate-binding proteins
CX649_06685	SM00382	ATPases associated with a variety of cellular activities
CX649_06690	SM00062	Bacterial periplasmic substrate-binding proteins
CX649_06695	SM00729	Elongator protein 3, MiaB family, Radical SAM
CX649_06725	SM00642	Alpha-amylase domain
CX649_06745	SM00382	ATPases associated with a variety of cellular activities
CX649_06770	SM00382	ATPases associated with a variety of cellular activities
CX649_06790	SM01018	B12 binding domain
CX649_06840	SM00859	Semialdehyde dehydrogenase, NAD binding domain
CX649_06860	SM01097	Carbamoyl-phosphate synthase small chain, CPSase domain
CX649_06865	SM01096	Carbamoyl-phosphate synthetase large chain, oligomerisation domain
CX649_06865	SM01209	CX649_06865
CX649_06880	SM00382	ATPases associated with a variety of cellular activities
CX649_06880	SM01086	C-terminal, D2-small domain, of ClpB protein
CX649_06915	SM00825	Beta-ketoacyl synthase
CX649_07090	SM00382	ATPases associated with a variety of cellular activities
CX649_07100	SM00062	Bacterial periplasmic substrate-binding proteins
CX649_07170	SM00729	Elongator protein 3, MiaB family, Radical SAM
CX649_07175	SM00342	helix_turn_helix, arabinose operon control protein
CX649_07175	SM00448	cheY-homologous receiver domain
CX649_07185	SM01008	Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain
CX649_07195	SM01092	CO dehydrogenase flavoprotein C-terminal domain
CX649_07255	SM00642	Alpha-amylase domain
CX649_07260	SM00345	helix_turn_helix gluconate operon transcriptional repressor
CX649_07260	SM00866	CX649_07260
CX649_07270	SM00354	helix_turn _helix lactose operon repressor
CX649_07280	SM00640	Glycosyl hydrolases family 32
CX649_07305	SM00346	helix_turn_helix isocitrate lyase regulation
CX649_07330	SM00854	Bacterial capsule synthesis protein PGA_cap
CX649_07355	SM00382	ATPases associated with a variety of cellular activities
CX649_07375	SM00926	Molybdopterin oxidoreductase Fe4S4 domain
CX649_07375	SM00929	NADH-ubiquinone oxidoreductase-G iron-sulfur binding region
CX649_07420	SM00346	helix_turn_helix isocitrate lyase regulation
CX649_07480	SM00530	Helix-turn-helix XRE-family like proteins 
CX649_07490	SM00346	helix_turn_helix isocitrate lyase regulation
CX649_07510	SM01230	CX649_07510
CX649_07635	SM00646	CX649_07635
CX649_07650	SM00382	ATPases associated with a variety of cellular activities
CX649_07680	SM00855	Phosphoglycerate mutase family
CX649_07700	SM00422	helix_turn_helix, mercury resistance
CX649_07705	SM01091	Transporter associated domain
CX649_07730	SM00283	Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer).
CX649_07730	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
CX649_07760	SM00382	ATPases associated with a variety of cellular activities
CX649_07785	SM00382	ATPases associated with a variety of cellular activities
CX649_07790	SM00382	ATPases associated with a variety of cellular activities
CX649_07810	SM00988	UreE urease accessory protein, N-terminal domain
CX649_07845	SM00382	ATPases associated with a variety of cellular activities
CX649_07900	SM01092	CO dehydrogenase flavoprotein C-terminal domain
CX649_07905	SM01008	Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain
CX649_07975	SM00849	Metallo-beta-lactamase superfamily
CX649_08005	SM00861	Transketolase, pyrimidine binding domain
CX649_08065	SM00838	Elongation factor G C-terminus
CX649_08085	SM00670	Large family of predicted nucleotide-binding domains
CX649_08105	SM00878	Biotin carboxylase C-terminal domain
CX649_08130	SM00357	Cold shock protein domain
CX649_08150	SM00567	E-Z type HEAT repeats
CX649_08150	SM00932	Scaffold protein Nfu/NifU N terminal
CX649_08240	SM00729	Elongator protein 3, MiaB family, Radical SAM
CX649_08240	SM00876	Biotin and Thiamin Synthesis associated domain
CX649_08265	SM00382	ATPases associated with a variety of cellular activities
CX649_08420	SM00849	Metallo-beta-lactamase superfamily
CX649_08430	SM00283	Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer).
CX649_08445	SM00530	Helix-turn-helix XRE-family like proteins 
CX649_08485	SM00331	Sigma factor PP2C-like phosphatases
CX649_08500	SM00347	helix_turn_helix multiple antibiotic resistance protein
CX649_08560	SM00387	Histidine kinase-like ATPases
CX649_08565	SM00448	cheY-homologous receiver domain
CX649_08565	SM00850	LytTr DNA-binding domain
CX649_08635	SM00347	helix_turn_helix multiple antibiotic resistance protein
CX649_08655	SM00382	ATPases associated with a variety of cellular activities
CX649_08700	SM00418	helix_turn_helix, Arsenical Resistance Operon Repressor
CX649_08710	SM00226	Low molecular weight phosphatase family
CX649_08715	SM00345	helix_turn_helix gluconate operon transcriptional repressor
CX649_08730	SM00347	helix_turn_helix multiple antibiotic resistance protein
CX649_08800	SM00382	ATPases associated with a variety of cellular activities
CX649_08835	SM00852	Probable molybdopterin binding domain
CX649_08845	SM00852	Probable molybdopterin binding domain
CX649_08890	SM00729	Elongator protein 3, MiaB family, Radical SAM
CX649_08895	SM00100	Cyclic nucleotide-monophosphate binding domain
CX649_08895	SM00419	helix_turn_helix, cAMP Regulatory protein
CX649_08935	SM01230	CX649_08935
CX649_08940	SM00422	helix_turn_helix, mercury resistance
CX649_08960	SM00382	ATPases associated with a variety of cellular activities
CX649_08975	SM00853	MutL C terminal dimerisation domain
CX649_08975	SM01340	CX649_08975
CX649_08980	SM00533	DNA-binding domain of DNA mismatch repair MUTS family
CX649_08980	SM00534	ATPase domain of DNA mismatch repair MUTS family
CX649_08995	SM00729	Elongator protein 3, MiaB family, Radical SAM
CX649_09120	SM00322	K homology RNA-binding domain
CX649_09120	SM00471	Metal dependent phosphohydrolases with conserved 'HD' motif.
CX649_09125	SM00382	ATPases associated with a variety of cellular activities
CX649_09130	SM00852	Probable molybdopterin binding domain
CX649_09180	SM00382	ATPases associated with a variety of cellular activities
CX649_09180	SM00843	CX649_09180
CX649_09195	SM00849	Metallo-beta-lactamase superfamily
CX649_09200	SM01130	CX649_09200
CX649_09210	SM00859	Semialdehyde dehydrogenase, NAD binding domain
CX649_09240	SM00316	Ribosomal protein S1-like RNA-binding domain
CX649_09240	SM00322	K homology RNA-binding domain
CX649_09245	SM01387	CX649_09245
CX649_09250	SM00904	Riboflavin kinase
CX649_09285	SM00316	Ribosomal protein S1-like RNA-binding domain
CX649_09285	SM00322	K homology RNA-binding domain
CX649_09295	SM00479	CX649_09295
CX649_09295	SM00481	DNA polymerase alpha chain like domain
CX649_09305	SM00228	Domain present in PSD-95, Dlg, and ZO-1/2.
CX649_09365	SM00260	Two component signalling adaptor domain
CX649_09370	SM00073	Histidine Phosphotransfer domain
CX649_09370	SM00260	Two component signalling adaptor domain
CX649_09370	SM00387	Histidine kinase-like ATPases
CX649_09370	SM01231	CX649_09370
CX649_09375	SM00448	cheY-homologous receiver domain
CX649_09385	SM00382	ATPases associated with a variety of cellular activities
CX649_09385	SM00962	SRP54-type protein, GTPase domain
CX649_09420	SM00448	cheY-homologous receiver domain
CX649_09470	SM00382	ATPases associated with a variety of cellular activities
CX649_09510	SM00382	ATPases associated with a variety of cellular activities
CX649_09510	SM01086	C-terminal, D2-small domain, of ClpB protein
CX649_09530	SM00436	Bacterial DNA topoisomeraes I ATP-binding domain
CX649_09530	SM00437	Bacterial DNA topoisomerase I DNA-binding domain
CX649_09530	SM00493	CX649_09530
CX649_09540	SM00881	CoA binding domain
CX649_09610	SM00382	ATPases associated with a variety of cellular activities
CX649_09610	SM00962	SRP54-type protein, GTPase domain
CX649_09610	SM00963	SRP54-type protein, helical bundle domain
CX649_09620	SM00382	ATPases associated with a variety of cellular activities
CX649_09620	SM00962	SRP54-type protein, GTPase domain
CX649_09620	SM00963	SRP54-type protein, helical bundle domain
CX649_09625	SM00968	SMC proteins Flexible Hinge Domain
CX649_09630	SM00358	Double-stranded RNA binding motif
CX649_09630	SM00535	Ribonuclease III family
CX649_09640	SM00822	CX649_09640
CX649_09645	SM00827	Acyl transferase domain in polyketide synthase (PKS) enzymes.
CX649_09660	SM00487	DEAD-like helicases superfamily
CX649_09660	SM00490	helicase superfamily c-terminal domain
CX649_09665	SM01120	CX649_09665
CX649_09665	SM01121	CX649_09665
CX649_09695	SM00220	Serine/Threonine protein kinases, catalytic domain
CX649_09695	SM00740	CX649_09695
CX649_09700	SM00331	Sigma factor PP2C-like phosphatases
CX649_09700	SM00332	Serine/threonine phosphatases, family 2C, catalytic domain
CX649_09720	SM00487	DEAD-like helicases superfamily
CX649_09720	SM00490	helicase superfamily c-terminal domain
CX649_09730	SM01409	CX649_09730
CX649_09735	SM00072	Guanylate kinase homologues.
CX649_09750	SM00831	Cation transporter/ATPase, N-terminus
CX649_09800	SM00934	Orotidine 5'-phosphate decarboxylase / HUMPS family
CX649_09815	SM00851	MGS-like domain
CX649_09815	SM01096	Carbamoyl-phosphate synthetase large chain, oligomerisation domain
CX649_09815	SM01209	CX649_09815
CX649_09820	SM01097	Carbamoyl-phosphate synthase small chain, CPSase domain
CX649_09850	SM00363	S4 RNA-binding domain
CX649_09875	SM00363	S4 RNA-binding domain
CX649_09920	SM00864	Tubulin/FtsZ family, GTPase domain
CX649_09920	SM00865	Tubulin/FtsZ family, C-terminal domain
CX649_09925	SM00842	Cell division protein FtsA
CX649_09980	SM00740	CX649_09980
CX649_09985	SM00740	CX649_09985
CX649_10025	SM00717	SANT  SWI3, ADA2, N-CoR and TFIIIB'' DNA-binding domains
CX649_10050	SM00228	Domain present in PSD-95, Dlg, and ZO-1/2.
CX649_10115	SM00116	Domain in cystathionine beta-synthase and other proteins.
CX649_10135	SM00487	DEAD-like helicases superfamily
CX649_10135	SM00490	helicase superfamily c-terminal domain
CX649_10175	SM00060	Fibronectin type 3 domain
CX649_10185	SM00278	Helix-hairpin-helix DNA-binding motif class 1
CX649_10185	SM00478	endonuclease III
CX649_10185	SM00525	CX649_10185
CX649_10250	SM00851	MGS-like domain
CX649_10315	SM00914	CX649_10315
CX649_10320	SM00028	Tetratricopeptide repeats
CX649_10320	SM00386	HAT (Half-A-TPR) repeats
CX649_10395	SM00562	CX649_10395
CX649_10425	SM00411	bacterial (prokaryotic) histone like domain
CX649_10495	SM00316	Ribosomal protein S1-like RNA-binding domain
CX649_10500	SM00563	Phosphate acyltransferases
CX649_10530	SM00870	CX649_10530
CX649_10540	SM00839	Glutamate/Leucine/Phenylalanine/Valine dehydrogenase
CX649_10555	SM00257	Lysin motif
CX649_10565	SM00487	DEAD-like helicases superfamily
CX649_10565	SM00490	helicase superfamily c-terminal domain
CX649_10610	SM00091	PAS domain
CX649_10610	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
CX649_10610	SM00387	Histidine kinase-like ATPases
CX649_10610	SM00388	His Kinase A (phosphoacceptor) domain
CX649_10615	SM00448	cheY-homologous receiver domain
CX649_10615	SM00862	Transcriptional regulatory protein, C terminal
CX649_10635	SM00363	S4 RNA-binding domain
CX649_10685	SM00382	ATPases associated with a variety of cellular activities
CX649_10695	SM00342	helix_turn_helix, arabinose operon control protein
CX649_10695	SM00448	cheY-homologous receiver domain
CX649_10700	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
CX649_10700	SM00387	Histidine kinase-like ATPases
CX649_10725	SM00382	ATPases associated with a variety of cellular activities
CX649_10740	SM01350	CX649_10740
CX649_10785	SM00861	Transketolase, pyrimidine binding domain
CX649_10805	SM00448	cheY-homologous receiver domain
CX649_10810	SM00228	Domain present in PSD-95, Dlg, and ZO-1/2.
CX649_10825	SM00363	S4 RNA-binding domain
CX649_10830	SM00861	Transketolase, pyrimidine binding domain
CX649_10870	SM00878	Biotin carboxylase C-terminal domain
CX649_10915	SM00382	ATPases associated with a variety of cellular activities
CX649_10920	SM00841	Elongation factor P, C-terminal
CX649_10920	SM01185	CX649_10920
CX649_10965	SM00450	Rhodanese Homology Domain
CX649_10980	SM00450	Rhodanese Homology Domain
CX649_11025	SM00471	Metal dependent phosphohydrolases with conserved 'HD' motif.
CX649_11090	SM01133	CX649_11090
CX649_11095	SM00729	Elongator protein 3, MiaB family, Radical SAM
CX649_11110	SM00271	DnaJ molecular chaperone homology domain
CX649_11130	SM00729	Elongator protein 3, MiaB family, Radical SAM
CX649_11135	SM00838	Elongation factor G C-terminus
CX649_11170	SM00849	Metallo-beta-lactamase superfamily
CX649_11180	SM00278	Helix-hairpin-helix DNA-binding motif class 1
CX649_11200	SM00471	Metal dependent phosphohydrolases with conserved 'HD' motif.
CX649_11210	SM01103	CX649_11210
CX649_11290	SM00732	Likely ribonuclease with RNase H fold.
CX649_11300	SM00863	Threonyl and Alanyl tRNA synthetase second additional domain
CX649_11315	SM00382	ATPases associated with a variety of cellular activities
CX649_11320	SM00028	Tetratricopeptide repeats
CX649_11340	SM00382	ATPases associated with a variety of cellular activities
CX649_11365	SM00287	Bacterial SH3 domain homologues
CX649_11365	SM00646	CX649_11365
CX649_11375	SM00471	Metal dependent phosphohydrolases with conserved 'HD' motif.
CX649_11375	SM00954	Region found in RelA / SpoT proteins
CX649_11410	SM01323	CX649_11410
CX649_11430	SM00382	ATPases associated with a variety of cellular activities
CX649_11435	SM00278	Helix-hairpin-helix DNA-binding motif class 1
CX649_11460	SM00257	Lysin motif
CX649_11505	SM01317	CX649_11505
CX649_11525	SM00316	Ribosomal protein S1-like RNA-binding domain
CX649_11615	SM00257	Lysin motif
CX649_11625	SM01004	Delta-aminolevulinic acid dehydratase
CX649_11660	SM00382	ATPases associated with a variety of cellular activities
CX649_11660	SM00464	Found in ATP-dependent protease La (LON)
CX649_11665	SM00382	ATPases associated with a variety of cellular activities
CX649_11670	SM00382	ATPases associated with a variety of cellular activities
CX649_11670	SM00994	ClpX C4-type zinc finger
CX649_11670	SM01086	C-terminal, D2-small domain, of ClpB protein
CX649_11695	SM01329	CX649_11695
CX649_11700	SM00917	LeuA allosteric (dimerisation) domain
CX649_11750	SM00909	Sporulation and spore germination
CX649_11760	SM00347	helix_turn_helix multiple antibiotic resistance protein
CX649_11765	SM00421	helix_turn_helix, Lux Regulon
CX649_11790	SM00465	GIY-YIG type nucleases (URI domain)
CX649_11800	SM00893	Electron transfer flavoprotein domain
CX649_11805	SM00893	Electron transfer flavoprotein domain
CX649_11825	SM00463	Small MutS-related domain
CX649_11825	SM00533	DNA-binding domain of DNA mismatch repair MUTS family
CX649_11825	SM00534	ATPase domain of DNA mismatch repair MUTS family
CX649_11830	SM00278	Helix-hairpin-helix DNA-binding motif class 1
CX649_11830	SM00481	DNA polymerase alpha chain like domain
CX649_11830	SM00483	DNA polymerase X family
CX649_11850	SM00873	B3/4 domain
CX649_11850	SM00874	tRNA synthetase B5 domain
CX649_11850	SM00896	Ferredoxin-fold anticodon binding domain
CX649_11865	SM00967	RNA 2'-O ribose methyltransferase substrate binding
CX649_11920	SM00863	Threonyl and Alanyl tRNA synthetase second additional domain
CX649_11930	SM00382	ATPases associated with a variety of cellular activities
CX649_11950	SM00846	Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain
CX649_11965	SM00898	Formamidopyrimidine-DNA glycosylase N-terminal domain
CX649_11965	SM01232	CX649_11965
CX649_11970	SM00279	Helix-hairpin-helix class 2 (Pol1 family) motifs
CX649_11970	SM00474	3'-5' exonuclease
CX649_11970	SM00475	5'-3' exonuclease
CX649_11970	SM00482	DNA polymerase A domain
CX649_11975	SM00244	prohibitin homologues
CX649_11980	SM00244	prohibitin homologues
CX649_11985	SM00091	PAS domain
CX649_11985	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
CX649_11985	SM00387	Histidine kinase-like ATPases
CX649_11985	SM00388	His Kinase A (phosphoacceptor) domain
CX649_11990	SM00448	cheY-homologous receiver domain
CX649_11990	SM00862	Transcriptional regulatory protein, C terminal
CX649_12000	SM01329	CX649_12000
CX649_12035	SM00919	Malic enzyme, NAD binding domain
CX649_12035	SM01274	CX649_12035
CX649_12065	SM00909	Sporulation and spore germination
CX649_12075	SM00347	helix_turn_helix multiple antibiotic resistance protein
CX649_12080	SM00421	helix_turn_helix, Lux Regulon
CX649_12105	SM00465	GIY-YIG type nucleases (URI domain)
CX649_12115	SM00893	Electron transfer flavoprotein domain
CX649_12120	SM00893	Electron transfer flavoprotein domain
CX649_12140	SM00463	Small MutS-related domain
CX649_12140	SM00533	DNA-binding domain of DNA mismatch repair MUTS family
CX649_12140	SM00534	ATPase domain of DNA mismatch repair MUTS family
CX649_12145	SM00278	Helix-hairpin-helix DNA-binding motif class 1
CX649_12145	SM00481	DNA polymerase alpha chain like domain
CX649_12145	SM00483	DNA polymerase X family
CX649_12165	SM00873	B3/4 domain
CX649_12165	SM00874	tRNA synthetase B5 domain
CX649_12165	SM00896	Ferredoxin-fold anticodon binding domain
CX649_12180	SM00967	RNA 2'-O ribose methyltransferase substrate binding
CX649_12235	SM00863	Threonyl and Alanyl tRNA synthetase second additional domain
CX649_12245	SM00382	ATPases associated with a variety of cellular activities
CX649_12265	SM00846	Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain
CX649_12280	SM00898	Formamidopyrimidine-DNA glycosylase N-terminal domain
CX649_12280	SM01232	CX649_12280
CX649_12285	SM00279	Helix-hairpin-helix class 2 (Pol1 family) motifs
CX649_12285	SM00474	3'-5' exonuclease
CX649_12285	SM00475	5'-3' exonuclease
CX649_12285	SM00482	DNA polymerase A domain
CX649_12290	SM00244	prohibitin homologues
CX649_12295	SM00244	prohibitin homologues
CX649_12300	SM00091	PAS domain
CX649_12300	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
CX649_12300	SM00387	Histidine kinase-like ATPases
CX649_12300	SM00388	His Kinase A (phosphoacceptor) domain
CX649_12305	SM00448	cheY-homologous receiver domain
CX649_12305	SM00862	Transcriptional regulatory protein, C terminal
CX649_12315	SM01329	CX649_12315
CX649_12350	SM00919	Malic enzyme, NAD binding domain
CX649_12350	SM01274	CX649_12350
