 CX649_00020 NONE
 CX649_00025 NONE
 CX649_00030 NONE
 CX649_00035 NONE
 CX649_00040 NONE
 CX649_00045    8403 ..    8416 +  -3.1   -3.9131   GACGTCAGTGAAACA               CTC-GG ACA CCAGAG               GTTTTTTTCATAAAT  55 106
 CX649_00050 NONE
        gabD   12051 ..   12064 +  -3.9  -4.37711   TTTTGCAGGGAGTTT               TTAAC ATCT GTTAA                TTTTCAATTTGATAG  62 47
 CX649_00070   14357 ..   14371 +    -5   -2.7263   AGCCATCATTGAAGC               GATTTC AAT GGAATC               ATTTACAACAATAGT  50 284
 CX649_00080 NONE
 CX649_00085 NONE
 CX649_00090 NONE
 CX649_00095 NONE
 CX649_00100   21039 ..   21071 +  -4.1  -3.19339   GGGCTGGAGATCGAT      GAAGCAGGAATTCAC GGG GTTGCTTCCTTCTTC      TGATTTTCCTTCCTC  51 80
 CX649_00105 NONE
 CX649_00110   23681 ..   23696 +  -4.8  -4.36914   AATGACGGCTACTCC              CTTTAA CATT TTAAAG               TTTTCTGGCAAAGCC  68 497
 CX649_00140 NONE
 CX649_00145   31028 ..   31040 +  -4.1  -3.36112   TCCGTGAAAAATCCC                TCTGT GAG ACAGG                TTAGGTGTTTTTTGC  53 253
 CX649_00155 NONE
 CX649_00160 NONE
 CX649_00165 NONE
        srlA NONE
 CX649_00175   37584 ..   37598 +  -3.6   -4.1021   TGGCAAGCTTCGGAC               TTTATG ATT CGTAAA               TTTGTAATTATAACA  59 12
 CX649_00180   38228 ..   38250 +  -7.7  -5.63857   AAATAAGACAGCAAA           CCGGGCA CCCATTTTT TGCCCGG           TTTTTTTGGCTTTTT  93 206
 CX649_00185   39520 ..   39550 +  -7.7  -4.85653   ATTGAAAAACTAACT       TCCGGTTGAAT CGTTTTTTC ATTCGACCGGA       TTTATTTTATGTATA  88 28
 CX649_00190   41094 ..   41105 +    -3  -3.81488   TTGGCTGTTGACGAT                GAAA ATTT TTTC                 TTGTATTTCGCAAGC  52 55
 CX649_00195   42480 ..   42507 +  -8.5  -4.99638   TGTCATTCAGACAAA        CTCCCTAGTTT CGAGGA AAACAAGGGAG         TTTTTGTGTGCATAT  95 341
 CX649_00210   46596 ..   46609 +  -2.5  -3.16881   TTATATGCTCAAGAA               TAAAA GCTC TTTTA                TTAATGGAGTAGGTG  45 23
 CX649_00215 NONE
 CX649_00220 NONE
 CX649_00225 NONE
 CX649_00230 NONE
        araD   50930 ..   50940 +    -4   -3.3663   TTTAGATAAATATAG                 GATA ATT TATC                 TGTGTTTATCATGAT  51 127
 CX649_00280   60181 ..   60193 +  -2.7  -3.51137   AAATGATATAATTGA                CGAAA TAC TTTTG                TTATGTAAAATAATT  47 94
 CX649_00285   61691 ..   61724 +  -9.1  -4.71401   AGAAATAAAATAAAA     CCCAGATTA-TCCA CACGGAA TGGAATAATCTGGG     TTTTGTAATTTTCTT 100 406
 CX649_00300   65736 ..   65775 + -16.8  -3.15249   GGGCAACAACAGGAT  CTAAGAAGTGATGAGGAA ATAT TTCTTCATCACTTTTTAG   TTGATGAAAACTATC 100 15
        hpaB   68597 ..   68607 +  -2.6  -4.73682   TCTAGCAAACTATAT                 TTTT CTG AAAA                 TTTTCTATTCTCGGG  63 136
        hpaD NONE
 CX649_00320 NONE
 CX649_00325 NONE
 CX649_00330   72492 ..   72505 +  -2.5  -2.79183   TTATAGTTGAAATCA               TATAT GATT ATATA                TATAATAAAAATAAA  42 45
 CX649_00335   73523 ..   73536 +  -2.3  -2.54896   AGGGCTGATGTATTG               CGCCT GCTA AGGAG                TGAATTGGATGGGCA  39 53
 CX649_00340 NONE
 CX649_00345   75066 ..   75084 +  -4.5  -4.42386   TTAATCGAATTATAT             GAAGCTG TCATT CAGCATC             TTTTCTCCGTCACCA  64 24
 CX649_00350 NONE
        hpaE   77078 ..   77093 +  -3.4  -2.65815   TTTTGCTTGTTAGTA              TATATT CTTT AATATA               TGATATAAGTATGGA  43 56
 CX649_00360   77768 ..   77817 +  -2.5  -5.48825   TTTCATAATAAAACA ATTTC--GAACAAATTCAACTGA TCGTAC TCAGTTGGATTTGTTCAAGGAAA TTTTTTTGGCTAATA  76 33
 CX649_00365 NONE
 CX649_00370 NONE
 CX649_00375 NONE
        livG NONE
        livF NONE
 CX649_00390 NONE
 CX649_00395   84777 ..   84793 +  -4.5  -2.99649   TCATGAATGTTAGTA              TGTTTTT ATA AAAAACG              TGTATGTGCCAATAT  50 15
 CX649_00405 NONE
 CX649_00410 NONE
 CX649_00415 NONE
 CX649_00420 NONE
 CX649_00425   88039 ..   88054 +  -7.5   -3.6279   CAATACTTTTTAAAT              GGGGG AATTTA CCCCC               TTCTTCCGCAAATTT  71 258
 CX649_00430   88500 ..   88516 +  -2.3  -2.98368   CCCAAGATAGAATAT              GAAAACA TCA TCTTTTC              GTTTGTCAATTGGCT  42 199
 CX649_00435   89417 ..   89433 +  -6.7  -3.15458   CCGCATAAAGTTTGT              GAAAATT ATC AATTTTC              TATCCTTTATTATTT  61 117
 CX649_00440 NONE
 CX649_00445 NONE
 CX649_00450   94048 ..   94075 +  -6.4  -5.78622   TTAGTAGATGTACTA        GAATTCTGCC TTTTTTTC GGTAGAATTC         TTTTTTTTGAAGTCA  95 168
 CX649_00455   95876 ..   95903 +  -3.4  -5.63103   CAGCAACCTCATGGT        CAAGCGCATCCTT GGA ATGGA-GCGCTTA        TTTTTTTGCTTAAAG  82 226
 CX649_00460   97291 ..   97317 + -10.9  -5.34857   TAATAAGAAGTCGAA         GGATCAGACTG AAATG CTGTCTGATCC         TTTTCTTTTGTTTCA 100 38
        purE NONE
 CX649_00470 NONE
 CX649_00475 NONE
 CX649_00480 NONE
 CX649_00485 NONE
 CX649_00490 NONE
 CX649_00495 NONE
 CX649_00500 NONE
 CX649_00505 NONE
 CX649_00510 NONE
        purH NONE
 CX649_00520  110550 ..  110571 + -10.9  -4.73108   TAAACCTTTCCAATG           GGACAGGAG GTTG TTCCTGTCC            TTTTCATTTTATAAA 100 111
 CX649_00525 NONE
 CX649_00530 NONE
 CX649_00535  113965 ..  113990 +  -9.1  -5.37593   GCTTCGTCATAAATT         GGGCTGCTGGAT GAA AT-CAGCAGCTC         TTTTTTAGTTTAGAA 100 29
 CX649_00540 NONE
        pcrA NONE
        ligA NONE
 CX649_00555  120272 ..  120305 + -11.3   -4.0044   TCAATAAAAAAAACA     GGTGATTTCAAAA AGGGGGGA TTTTGAAATCACC      TTTATAATGATCGTT  93 34
 CX649_00565 NONE
        gatA NONE
 CX649_00575  123999 ..  124020 +  -8.7  -5.02323   GATAATTTTAATAGA           CGCTCAGCT TAGC AGCTGGGTG            TTTTATTTATAGTAA  95 36
 CX649_00580  125170 ..  125199 + -10.8  -2.63476   AAAAACGCGCCAATT       GAAAAGAGCAGC GAATAG GCTGCTCTTTAC        CGTTTTTGAATAGAT  81 8
 CX649_00590  127155 ..  127170 +  -5.4  -2.74514   CAGGAAGACAGGGGA              GAAGGG GAAA TCCTTC               TCCTTCAAGCTTTGA  51 87
 CX649_00595  128883 ..  128893 +    -4  -2.78371   AGAAGTTTAGATTTG                 TCAT TTA ATGA                 GTTGTTAGACATGTA  46 116
 CX649_00600 NONE
 CX649_00605  130849 ..  130866 +  -7.7  -3.24924   ATACTTTGGTGTGGC             GGTGGAG AGCT CTCCATC              TCTTGTGAGTGGAAA  67 245
 CX649_00610 NONE
 CX649_00615 NONE
 CX649_00620  137403 ..  137443 + -12.1  -3.76888   GTTTTTCTTCGGTGT  TAAGGCATCTTTGAGGC TGGAAAC GTCTTGAAGATGCCTTA  TATTTCTTATACATA  91 107
 CX649_00630  139359 ..  139406 + -16.6   -5.0916   GAAAAAAATATTATT TTCGGTAAAATAAGCATCGAGG TATT CTTTGATGCTTGCTTTACCGAA TTTTTATATTAAGAA 100 93
 CX649_00635  140757 ..  140772 +  -6.2  -4.07568   TTATTAAAAACCCGA              CAATTC AAAG GAATTG               TTTTGGACCAAGGAA  69 390
 CX649_00680  149463 ..  149473 +  -6.8  -2.78774   CAATCGTTTTATGGG                 GACG GGA CGTC                 ATTTACGACTTTATA  58 429
 CX649_00695 NONE
 CX649_00700  154328 ..  154357 + -12.3  -3.95727   ATGGTAAGCGTAAAA       TAGTCCACACCTA CCTT TAGATGTGGACTA        TTGTTATGATTTATT 100 262
 CX649_00725 NONE
 CX649_00730 NONE
 CX649_00735  160238 ..  160254 +  -2.9   -3.1247   TCAAGAGATATGCTG              TCCTACT TTT AGGGGGA              TTGAATATGAAACCT  43 14
 CX649_00740  161501 ..  161526 +  -5.5  -3.43246   TTACAGGAAAAGTCC         GAGTAAAGG TATAAACC CCTTTGCTC          TTCCCTTATTTTTTC  57 12
 CX649_00745 NONE
 CX649_00750  165446 ..  165483 +  -2.8  -5.13521   GATAAGACAACAGAA   GGCAGTTCCGATGTATA TTAAC TAATTAT-GGAACTGCC   TTTTTTCCGTCATTT  69 70
 CX649_00765  167224 ..  167234 +  -2.6  -3.90744   AAAAAATGAAACATT                 TTTT TTG AAAA                 TTATTTAAGAAGAAA  53 50
 CX649_00770  168413 ..  168436 +  -3.2  -3.60048   AAGACACTATTAAAA          TTTGCGTTTT ATAC AAGACACAAA           ATTTTTTAAAACAAA  50 99
 CX649_00775 NONE
 CX649_00780  169553 ..  169584 +  -6.9  -3.08738   AAATCAGTGAATCTG      CGTAAAAAA-GATA CTATT TATCGTTTTTTACG      TTCACTAACATTCTT  63 353
 CX649_00785  171354 ..  171388 + -18.8  -3.18452   GGTTAAATACAATGG     CATCTCTCCAATCTCA TTT TGGGATTGGAGGGATG     TTCAGTTGAAATCAT 100 35
 CX649_00790 NONE
 CX649_00795 NONE
 CX649_00800 NONE
 CX649_00805 NONE
 CX649_00810 NONE
        nagB  177635 ..  177662 +  -3.5   -5.2696   GATAAACAATGGAAA        GCATTCATC TTCCAATAGC GATGAGTGC         TTTTTTCCCTTTTGA  74 238
 CX649_00825 NONE
 CX649_00830  179641 ..  179663 +  -4.9  -4.77442   CAATGACAAAAACAA          TTCCTG-CTC CTAT GAGTCAGGAG           TTTCTTTGTTGTATT  72 240
 CX649_00835  180561 ..  180597 + -15.4  -4.55295   ACTTAAAAAAACCCA    TCCCAAGAATGCTG GCGTCATAA CAGCATTCTTGGGA    TTTGTTTGTAAAACA 100 44
 CX649_00845  183314 ..  183343 +  -2.9  -4.03885   GCGGCACTAACTGTA       TCCACTC-TGAG CCGCCAA CTCAAGAGCGGA       TTACTTTTTTTAAAA  55 268
 CX649_00865  187522 ..  187567 +  -8.4  -4.11216   GATCATCCTTTTCTT CCTCTCTTATGTTTGAATGT TCTGAC ACTCCCAAGCATAAGAGAGG TTTTGAAAATGGGAA  81 113
 CX649_00870  190198 ..  190252 +  -8.2  -4.81212   TGATTTTTGATATGC CTCCCCAT-TAGGTAGACAGATT AAAAAATAAA AATCTGTTTATCTTCATGGGGAG TTTTATTATGATAAC  86 347
 CX649_00875  191589 ..  191616 +  -9.2  -3.75863   AAAGAATCCTAAAAA        CACCCTTCACAGC TAA GCA-TGAAGGGTG        TTTCATCACCGTTTT  81 443
        isdC NONE
 CX649_00905  201286 ..  201321 + -19.3  -5.00196   AAAAAATAACCTGAC    TGTTGTCTTGATGCG GACATG CGCATCAAGACAACA     TTTTCTTATTTAAAA 100 32
        isdE NONE
 CX649_00915 NONE
 CX649_00920 NONE
        srtB NONE
 CX649_00930 NONE
 CX649_00935 NONE
 CX649_00940 NONE
 CX649_00945  208041 ..  208074 +  -6.1  -5.20328   TAGATATCCGAATTG     CGGCCTTTTCC AAATGAATTGCG GGAAAAGGTCG      TTTATTTTTTTCAGC  83 100
 CX649_00975  213636 ..  213649 +  -2.3  -3.37028   AATTTGAGGTTGAAA               GGCTA CCCG TTGCC                TTCTCGAATATTAAT  45 116
 CX649_00980  216316 ..  216330 +  -4.4  -3.12207   ATCAAGATTCAAACA               TTATAT TTC ATATAA               TATATAATTTTAATT  50 187
       cas5c NONE
       cas8c NONE
       cas7c NONE
        cas4 NONE
 CX649_01005 NONE
        cas2  222019 ..  222037 + -10.3  -2.54193   AGGAAAAATCGCTGT             CGCATCC TTTAT GGATGCG             TGGATTGAAATAGTA  77 196
 CX649_01015  231664 ..  231701 + -11.6  -4.92783   TTTTAAAAAATGAGG   GCCATTTCAAACTT TGATAAATGT AAGTTTGAAATGGC    TTTTTGTAATGCGTT 100 74
 CX649_01025 NONE
 CX649_01030  233844 ..  233858 +  -3.6  -2.64679   AAGGAGTGAGGTTTA               TAGATG GAT CATTTA               GTCTTTGAAGTTGGT  45 32
 CX649_01035  235059 ..  235087 +  -4.6  -3.08522   AAGAAAAAAATAAAA       GTCCCA--GGCGAG TAG CTCGCCAATGGGAA       ATTTTAAGCTCAATG  50 11
 CX649_01040  235769 ..  235824 + -11.8  -4.68506   TGTCTAAAAAGTCCA TAA--AAACAGAGCGAATGGAGAAAAC AATGA GTTTT-TCCATTCGCTCTGTTTCCTTA TTTTTGAAATTGGTT 100 507
 CX649_01050 NONE
 CX649_01055 NONE
 CX649_01060 NONE
 CX649_01065 NONE
 CX649_01070  242102 ..  242132 + -11.3  -5.25656   CGAAATAAAAGGAAA      CCATCGCCATCCTCA ATT TG-GGA-GGCGATGG      TTTTTTAATGATTTT 100 33
 CX649_01080  244911 ..  244935 + -14.3  -3.92745   CCTCTCAATTTGTAG          CGGCTGAGCTA TAT TTGCTCAGCCG          TTTCTGCCAATTTTT 100 221
 CX649_01085  246642 ..  246681 + -16.6  -3.88603   AATATTTCATAGCTG  GACGATCTCGGAAGGTTC AAAC GAACTTTTCGGGGTCGTC   TTAATTTTTGTCACT 100 43
 CX649_01090 NONE
 CX649_01095 NONE
 CX649_01100  251389 ..  251431 + -18.7  -4.10958   GTTTATGGATGCGAA GGGGGTGTCTAATAAGTCGT TTTT ACGGCTTATT-GACGCCCCC TTTAATGTTTTATAA 100 44
 CX649_01110 NONE
 CX649_01115 NONE
 CX649_01120  255141 ..  255153 +  -7.7  -3.33815   TCTCAGCAGAAGGAA                GAGCT GTC AGCTC                TTCCTTACAAAGAAT  69 76
 CX649_01125  256223 ..  256242 +   -10  -5.21709   AATAATTTTTCAAAA            GGGAGCTG AAAA CAGCTCTC             TTTTTTCATATGCAC 100 36
 CX649_01140 NONE
 CX649_01200  271849 ..  271898 +  -9.6  -5.30575   CCGATAAATCCCTAA AAT-GAAGCAAGTGGAGAAAAAC AATGC GTTTCTCTCCACTTGCTTTTATA TTTTTTCGATTTTTA 100 78
 CX649_01205  273244 ..  273267 +  -9.6  -5.43414   TTCACTCATAAAAAA          TCCCTCATGG TTAT CCATAAGGGA           TTTTTTGTATGTGCT 100 30
 CX649_01230  278276 ..  278307 +  -2.5  -4.43877   GAAAAATTAATCTCA     TGATGAGA-C-TCGT TTCT ACGATGATCTCATTA      TTTATTTGAGGCTTC  58 31
        menC  279641 ..  279687 + -22.1  -4.08394   AAAGTATTTACCCTA TAAACAAAATTATCCTCTGCA TGTTT TGCAGAGGATGATTTTGTTTA TTTTACAACCAATCT 100 23
 CX649_01245  281850 ..  281862 +  -4.1  -3.99062   AATGTAGTTTCAAAT                CTCAG ATT TTGAG                TTTATGATAGCTCTT  59 49
 CX649_01250 NONE
 CX649_01255  283113 ..  283124 +    -3  -4.79352   TGACCCCCAAACAAA                GAAA ACGT TTTC                 TTTTATTATAAATCA  65 270
 CX649_01270 NONE
 CX649_01275 NONE
 CX649_01280  285881 ..  285911 + -19.1   -5.4505   TTATCAAGCGCATTC       CTCGGGCTGTCGA CTTTT TCGACAGCCCGGG       TTTTTTATTCAGCAA 100 253
 CX649_01290  286818 ..  286831 +  -2.5  -2.79915   TGAGCAAAAAAATTG               TTTTT AGAA AAAAA                TGTAATACAATAAAT  42 49
 CX649_01295  287492 ..  287520 + -10.5  -4.38116   GTTTCAACAAAAAAA        TAGAAGCAGAT GATAGAG ATCTGCTTCTA        TTTCATTTTTATGAA 100 43
 CX649_01310 NONE
         cax  292171 ..  292184 +  -5.3  -3.21593   TTATGTCATCATGGG               GATAG GCTT CTATC                TATTATAGGGAGATA  55 4
 CX649_01320  293217 ..  293239 +  -2.1   -4.7373   TGGCAATTCAGCTGT          TGG--GCAATC GGG GATTGCATCCA          TTTTTCATAGGCTGA  64 192
 CX649_01330 NONE
 CX649_01335 NONE
        mtnB NONE
 CX649_01345  298128 ..  298169 +  -9.6  -2.57769   TTCTAAAACATTAAA GGGGC-GTCT-ATAAGCCGG AAAA TCGACTTATTAGACAGCCCC CTCTATTTAATGGAT  75 464
 CX649_01350 NONE
        mtnA  300968 ..  300990 +  -2.1  -4.59853   CCCGTGCTTGGAGAA          GC-AATTG-CC AAT GGTCAATTCGC          TTTTTCGGCCATTCG  61 334
 CX649_01365 NONE
 CX649_01370  304465 ..  304492 + -11.4  -5.44119   AAATATTAAACTCAA        TGCCATAGCCAG ATGA TTGGCTATGGTA         TTTTTTTGAAATCAA 100 39
        pdaA NONE
 CX649_01380 NONE
 CX649_01385  308175 ..  308192 +  -4.9  -3.50393   AAGGTCTGGTAATAA             CTTTGTA GAAT TACAAGG              TTATGTGCGATCCCA  55 493
 CX649_01395 NONE
 CX649_01400  309372 ..  309403 + -14.7  -3.52102   AATCGATTGTTTATC      GTCAATACCGAAT ACATGC ATTCGGTATTGAC       TTGTGTAAATGAAAT 100 189
 CX649_01415  311379 ..  311392 +  -3.9  -4.61199   TAATCATTATGTAGT               GTTAT GTGT ATAAC                TTTTGTATATCCAAT  65 38
 CX649_01425  313643 ..  313661 +  -3.2  -2.95204   GCTCACTTCTCATTG             TAAAATTG TTG CAATTTAA             ATTATTTGCCAATAA  44 50
 CX649_01430 NONE
 CX649_01435  315613 ..  315633 +  -7.5  -4.64159   ACATTCGGTAGAGTA            TATGCCGCT TAT GGCGGCGTG            TTTATTATTCTTTCT  82 219
 CX649_01445  318098 ..  318118 +  -9.7  -5.32599   GAATTTTCATATTGA            GTCGGCATT TTG AGTGCCGGC            TTTTTGTATTTTATG 100 114
 CX649_01450  319835 ..  319859 + -15.1  -3.88232   ATAATTTTTGTAAAA          TCCCGAGGAGA TGG TCTCTTCGGGA          TTCTTATATAAAGGG 100 37
 CX649_01470  322890 ..  322902 +  -6.3  -3.28712   TCTCTTTTACGATTT                CTTCA TTC TGAAG                TTCTCGGGAGGAAGG  61 353
 CX649_01510  327604 ..  327617 +  -5.3  -2.67667   TTGCAAAGTAGAAGA               GGAAA GGGT TTTCC                ATATTTGATAGATAC  51 4
 CX649_01515  328865 ..  328902 + -15.7  -5.00884   ACGTTATGTGAGCAT   CCCCTTCAATTAAGGCA TTTC TGCCTATATTGAAGGGG    TTTTTTAAGGGCAAT 100 70
 CX649_01525 NONE
        glsA NONE
 CX649_01535 NONE
 CX649_01540  333897 ..  333938 +  -4.5  -5.13521   AGTATTAAAAAGAAA GGGC-CCGCAAAAAGTCAGT TCA ATTAACTTTTTGCAAAGCCC TTTTTTCAATGGTTT  76 49
 CX649_01555 NONE
 CX649_01560  339586 ..  339613 +    -7  -5.86976   CGTTCTTGTGTATAA        GCATTCATCGTC CAGA GAAGGTGAGTGC         TTTTTTATTTTATCC 100 203
 CX649_01565  340653 ..  340691 + -13.5  -5.29782   GGTACCGCGGATATA  GACTCATATTCGTCCTTT TTCG AAAGGATGA-TATGAGTC   TTTTTTATGACTGTC 100 280
 CX649_01570 NONE
 CX649_01575  343116 ..  343157 +    -6  -5.38249   AGAAATGATAAAAAA ATGGAAGCAGACATCTTGA TTCGT TCG-GATGTCTTCTTCCAA TTTTTTATGCTTCCT  84 40
 CX649_01585 NONE
 CX649_01590  345642 ..  345653 +    -3  -2.62263   TTTAGCTTGAAATCT                TTTG TAAA CAAA                 TAGTATCGAAAAAAT  43 208
 CX649_01595 NONE
 CX649_01600  346780 ..  346819 +  -6.5  -2.80113   ATTTTCGATAAAAAA  AGTGGATAACTATTGGT ATAATC ACCTTTAGTTATCCACA   TGTAGTGAAATGGTG  58 48
 CX649_01610 NONE
 CX649_01615  351895 ..  351905 +  -2.6  -3.86346   AAGAAATCATTTACT                 TATA AAA TATA                 TTTGTCAGACCGTCG  51 21
 CX649_01620 NONE
 CX649_01625  353562 ..  353574 +  -3.4  -5.09173   GCATCAATGACGGAT                CAGA TATTT TCTG                TTTTTTGACATCTTC  72 399
 CX649_01635  354607 ..  354632 + -11.9  -5.15634   AATGGTTTCAAAAAA         GTCGGCAGAAG AGGT TTTCTGCCGGC          TTTTTTAATGAAGTA 100 39
 CX649_01645  355356 ..  355366 +  -5.4  -4.32048   TTTTTCCGTCTTCAA                 TGAC AAA GTCA                 TTTTCGATATTATTG  70 83
 CX649_01660  356835 ..  356857 +  -6.2  -2.76618   TTATATACAATAATA           AAACCCGATC ATA GATCGGGTCA           ATCTGTTTTATTTAT  55 28
 CX649_01695 NONE
 CX649_01700 NONE
        hemH NONE
 CX649_01710  368167 ..  368195 +  -7.5  -4.40561   TCAATTTTTACATTT        GGGACAAGCTT AAAAGGC AGGCTTGTCTC        TTATTTTTCAGAGGA  81 13
 CX649_01715  369493 ..  369530 + -11.5  -4.70515   TAAGAGAAGAGAAAA   AATATTCAGGCAATTCT TTTT AGAATTGCCTGAATAAA    TTTATTTTACATGTA 100 48
 CX649_01725  370611 ..  370637 +  -6.7  -5.41746   GTGTTCCATTTTCTG         TAAGGATGC AGTATGTTG GCATCCTTA         TTTTTTTGGAAAATT  87 132
 CX649_01730 NONE
 CX649_01735 NONE
 CX649_01740  373486 ..  373508 +  -7.7  -4.67011   TTAAGCTGATATTTA           CCTCTTTCC ATTCA GGGGAGAGG           TTTTTAAATGCAATT  83 32
 CX649_01745 NONE
 CX649_01750 NONE
 CX649_01755  375162 ..  375191 +  -2.9  -3.68726   TTTATCTTTTTACAG       CTTCTTTTTCTAA ATAT TTTGGAAAAGCAG        TTCTATTACGATGTT  48 13
 CX649_01760  376515 ..  376543 +  -6.2  -4.89966   ATAAAAAATAAAGAA       TAA-ACTCCTTGT TTAT ACAGGGAGTCTTA        TTTATTTTTAAATCT  81 23
 CX649_01765  379291 ..  379303 +  -5.5  -3.55071   AATGTTGGGCTGATT                TTGGC AAT GCCGA                TTTAAAACGATATAC  59 66
 CX649_01770  380755 ..  380791 + -19.8  -4.82901   GCTGTGTGTTTAAAA    CAAAACGACTGTAACA AAAAA TGTTACAGTCGTTTTG    TTTTTATAGCGAAGA 100 28
 CX649_01780 NONE
 CX649_01785  383050 ..  383071 + -10.2  -4.54727   TTGGCAAGACAATCA           TCATCGGC AAACAA GCCGATGA            TTTTCGTTTACAGGA 100 43
 CX649_01790  384613 ..  384630 +  -7.7  -5.47821   CTATTTTTTAAAAAA             GGAGCCT TTTA AGGTTCC              TTTTTTTGCGTAGAT  93 52
        ccpA  385847 ..  385887 +  -4.7  -6.15259   CTTTTTAAGCTGAAG  AAAAAACGGCCAAGCTTTT TTA AAAAGTTTGGCCGTTAACA  TTTTTTTTTGCATTA  95 42
 CX649_01815  390259 ..  390287 + -11.8  -4.45068   TTAAAAATAATAGAA        GCCGTAAGTCTA GTAAA TAGGCTTGCGGC        TTTGTTATTGGCGGT 100 37
 CX649_01820  390827 ..  390842 +  -6.1   -4.7889   AGTAAAAGATAAAAA              GGACC ACGTGC GGTCC               TTTTTAAATATTTAT  77 43
 CX649_01830  395501 ..  395543 + -15.9  -5.14563   ATAGGTCAAAAGCAT CCCCCCTTCAATTGAATGGA TTAA TTTATTC-ATTGAAGGGGGG TTTTTTCGTACAAAA 100 144
 CX649_01840  403161 ..  403173 +  -3.5  -5.27938   AATATTGATGAAGCC                TTTTT ATG AAAAA                TTTTTGTTTAGAACT  74 158
 CX649_01850  405453 ..  405481 + -11.2  -4.58773   CTGTTGTAGACAAAA        TAGGATTCAGAC GCTCA GTTTGAATCCTA        TTTTACTTTAATGAG 100 94
 CX649_01865  407000 ..  407030 +    -6  -3.23984   GATGAAAAGAAGAAA       CACCGAAGGAGCGG ATT CGGCCTCTTAGGTG       TTAATACTCCATTTC  59 384
 CX649_01875  408112 ..  408138 +  -7.4  -5.27779   CAGTTAGAAATTTTT         TTAGAAGGAC ATAATTC GTCCTTCTGA         TTTTTTACTCTTAGG  89 84
 CX649_01895  411541 ..  411553 +  -4.9  -4.12942   AAAATGTCGGCAGGT                TTTCT ATG AGAAA                TTTTCGGCCCTTTCA  63 362
 CX649_01925  416445 ..  416489 + -15.2  -3.53779   AGCAGCATTAAAAAG AGGGGGTGTCTAATAAGTCGT TTTT ACGGCTTATT-GACGCCCCCA TTAATGTTTTAGAAA 100 13
 CX649_02065  442703 ..  442733 +  -9.9   -5.5604   TTTATAAGTTCTTTA       TAAAACTCGCTCA ATCGG TGAACGAGTTTTA       TTTTTTATTGATTAA 100 86
 CX649_02115  451317 ..  451339 + -10.7  -5.66684   ATGCAAGAATGCGAA           GAAATTGGC AAATC GCCAATTTC           TTTTTTTATGAATTA 100 48
 CX649_02140  457614 ..  457648 +  -8.1  -4.97666   ACAAAAAAGCAAAAA    GCCCTTTTTCACACAA TAAC TTGT-TGAAAAAAGGC     TTTTTCTGCTCTCTT  90 398
 CX649_02165  464105 ..  464139 + -10.2  -4.85782   GACATATAGGCAAAA    TAAGGGTTTGCG-CA TAGTCT TGACGCAAGCCCTTA     TTTATTTTTCAAAGA 100 40
 CX649_02170 NONE
 CX649_02175  465926 ..  465947 +  -6.5  -4.87807   TATGTTTGATTGAAA           GTAGCTGGC GAAT GCTTGCTAC            TTTTTAGTATGTTGC  83 109
 CX649_02185  467155 ..  467202 +    -2  -3.72051   GCAAAGCTTAAAAAA TAAGAAACCGCCTTTTAAGGAA TGAA TGCTTCCTGAGGCGGTTTTTTA TTTAAGGTTGTTGAA  50 23
 CX649_02190 NONE
 CX649_02195 NONE
 CX649_02200  469934 ..  469958 +  -3.5  -3.64703   TTTCATTTCGTTTTA          CAACCGTTCTT TTA AAGGAGGGATG          TTTACATGACAGAAA  50 11
 CX649_02205  470504 ..  470545 + -15.5  -3.85817   ATTCAGCAAAAAATG TGAAAAGCAGGGAATTTTT GATG GAAAATTCCCTGCTTTTTG  TTTATGCAAGCGCCT 100 59
 CX649_02215 NONE
 CX649_02220 NONE
 CX649_02230 NONE
        gerQ  474872 ..  474895 + -11.1  -3.73709   CAGAAGTCTAAGCAG          CCTTGCTTC TTTAAT GAAGCAAGG           TTATTCAGCTTTTCT  90 158
 CX649_02245  478197 ..  478212 +    -4  -3.73224   TTCAATACCATACCC              CGAGTT AGGC AACTTG               TTTAATGGAAGGTAA  55 123
 CX649_02285  483713 ..  483736 +  -9.7  -4.83759   TATTCATTAGTTAAA          GGAACAATG AACTGG CATTGTTCC           TTTTTCAATTTCATT 100 31
        rocF  487492 ..  487520 + -17.6  -4.59081   GCTCACTAATTAGAA        GGGTTGTCCGAA AATGC TTCGGACAACCC        TTTTCTATACATTTA 100 271
        yyaC  517509 ..  517520 +  -4.4  -3.96469   TGTTCCAAATTTTTC                TCGT AAAA ACGA                 TTCTTGTTCACGTAT  61 165
 CX649_02510  528709 ..  528748 +   -13   -3.9377   ATAATTTTGACGTTG  GTACGCACAGTTTATCCA CATG TGGATAGACTGTGCTTCC   TTTCATTAACATTGT 100 56
 CX649_02515 NONE
 CX649_02520 NONE
 CX649_02525  531193 ..  531222 +  -7.9  -5.28176   TAAGATAATTATTTA       TGGACTGAATGGT AAAA ACCGATCAGTCTA        TTTTTTGTCAATAGG  89 103
 CX649_02530  532805 ..  532817 +  -4.1  -3.15324   TACCGGTCTTTACTC                GTTTG TAT CAAGC                CTTTTACTAAACATC  51 3
 CX649_02535  533348 ..  533359 +  -2.2  -2.97613   CGCTTTCTTTAAAAC                CTTC AATC GGAG                 TATAATTAATTGATC  42 70
 CX649_02540 NONE
 CX649_02545 NONE
 CX649_02550 NONE
 CX649_02555 NONE
 CX649_02560  539088 ..  539111 + -10.4   -2.6127   GTTCAATAATCCAAT          GGGCATAC-TG CTT CACGTATGCCC          CTCTCTTTCATTATA  78 32
 CX649_02565 NONE
 CX649_02570 NONE
 CX649_02575  542780 ..  542793 +  -2.4  -3.40403   TTGCAAAGCCAAAGC               TGCT GGAAAA AGCA                TTGTAATAAGGGAGA  45 6
 CX649_02580 NONE
 CX649_02585  543987 ..  543997 +    -4  -2.98493   AAGAAAAAGTAATCT                 TTGA ACA TCAA                 TGGTTTGGTGGTACA  47 29
 CX649_02590  545780 ..  545807 +   -15  -4.89063   GGAACCGCGCTTATT        TGCGTCTCTGTA TCTA TACAGAGGCGCA         TTTCTTTTTCAGTAG 100 290
        cysE NONE
        cysS NONE
 CX649_02605 NONE
 CX649_02610 NONE
 CX649_02615  549628 ..  549638 +  -2.6   -2.6914   AATCTTGCAGTATAA                 TATT TCT AATA                 ATTGTATGCGCGGTC  41 67
 CX649_02620 NONE
        rpmG NONE
 CX649_02630  550795 ..  550807 +  -6.2  -5.28481   AAGTCCGTCAATAAA                CCCG GTAAA CGGG                TTTTTTCATTGCCTA  84 77
 CX649_02635 NONE
        rplK  552021 ..  552052 + -11.7  -4.24342   TGCATTGGTGTAGTA      GGTTGCGAGTTTG TTTATT CAAGTTCGCAACC       TTTATTCGTGGGAGG 100 47
 CX649_02645  552959 ..  552986 +   -15  -4.05788   TGCTTATTTGTACGA        TACCTCCATGTC TGCG GGCATGGAGGTA         TTTCATTTCACCGGC 100 183
 CX649_02650 NONE
 CX649_02655  553981 ..  554012 + -12.4  -4.62471   GCTGTTAAATAAATA      GAAAAGCTCGCTGA TTCA TTGGCGGGCTTTTC       TTTTATGTATGAATT 100 43
 CX649_02660  554803 ..  554829 +  -3.2  -5.67529   CTATTTCTGCGCAGT        GG-TTTTCTTT TTTCAT AAAGAAAATCC         TTTTTCTTTTTACTT  82 158
        rpoB NONE
        rpoC  562126 ..  562140 +  -2.8  -3.14963   ATAAAAAATCCGTTG               ACGAAA CGA TTTCGG               TTGAATAATTGTCGG  45 3
 CX649_02675  562512 ..  562539 + -10.8  -4.40963   ATTATAAAATAAACA        TTGTTTTTGTAG ATTT CTGCAAAAACAA         TTGTTTTTACCAAAT 100 29
 CX649_02680 NONE
 CX649_02685 NONE
        fusA  565705 ..  565737 + -10.6  -3.43689   AATACTTATGTAGCC     CTTGGATGCGGATGC ACTT GCG-CCGCCTCCAAG      TATTCTATATATTTA  85 68
         tuf  566991 ..  567009 +  -8.1  -5.88565   GACTAATTGAAAAAA             GCGAGTC GAATA GGCTCGC             TTTTTTTATTATAAA 100 35
 CX649_02700 NONE
 CX649_02705 NONE
 CX649_02710 NONE
 CX649_02715 NONE
 CX649_02720 NONE
 CX649_02725 NONE
        rplV NONE
 CX649_02735 NONE
 CX649_02740 NONE
 CX649_02745 NONE
 CX649_02750 NONE
 CX649_02755 NONE
 CX649_02760 NONE
 CX649_02765 NONE
 CX649_02770 NONE
 CX649_02775 NONE
 CX649_02780 NONE
 CX649_02785 NONE
 CX649_02790 NONE
 CX649_02795 NONE
 CX649_02800 NONE
 CX649_02805  577698 ..  577716 +  -4.5  -3.05384   TGAAATAAGAGGTTG             TGGGGCG ATGAA TGTCCCA             TTCCCTCGAAAAGCG  50 33
 CX649_02810 NONE
         map NONE
 CX649_02820 NONE
 CX649_02825 NONE
 CX649_02830  579853 ..  579870 +  -2.7  -2.50988   TAATTTTTGAAGGAG             GTGCTCAT ATT ATG-GCGC             GTATTGCTGGTGTAG  41 38
 CX649_02835 NONE
 CX649_02840  580702 ..  580714 +  -2.7  -4.07535   AGTTATAGATTCTAG                CATTT ATA AGATG                TTGTTTGTGCACATT  53 88
 CX649_02845 NONE
 CX649_02850 NONE
 CX649_02855 NONE
 CX649_02860 NONE
 CX649_02865 NONE
 CX649_02870  585705 ..  585731 +  -2.4  -4.62336   ATGTATTTCAAGCCC         CACGATTA GCCCCGGAAAA TAATCGTG         TTTTTGAAATAGACT  59 98
 CX649_02875 NONE
 CX649_02880  586646 ..  586664 +  -8.9  -5.64421   GATTCGAACCTTAAA             CCACAAC AAATC GTTGTGG             TTTTTTATTTGCAAT  95 42
 CX649_02885  587198 ..  587224 +    -8  -5.64274   AGCAGTTCATGCATG         GCTCATTTCAAC TTC GTTGGAACGGGC         TTTTTTTATGCCTAA  93 42
 CX649_02890  587692 ..  587711 +  -2.2  -4.32049   GAATAGGCTTAAAAC            TTTTGTGA CTGT TCAAAAAA             TTTTAGTGCCTTATA  57 43
 CX649_02895  590654 ..  590673 +  -6.4  -4.79955   GCAACATTCATCTTA            GCTCCC ATATTTGC GGGAGC             TTTTGTTATGACTCT  80 86
        cwlD NONE
 CX649_02905  592917 ..  592952 +  -6.6  -3.51411   AACAGAAAAGTAAAG    GAAGGGAGAGGAGGTC TATT GGCCTCCGCCCCCGCC     TTCGTTTCCGGAGCT  62 28
 CX649_02915  594294 ..  594320 +  -6.7   -3.6501   GCCAAAAGCAAAAAA        GAGCTG-AAGGA GTTT TCCTTATAGCTC         TTTAAAATGCTTATT  64 19
 CX649_02930 NONE
 CX649_02935 NONE
 CX649_02940  598582 ..  598597 +    -4  -3.87149   AAGGAATTGTTTATT              TGCGAGC AAG GCT-GCA              TTTGAATTTGATGAC  55 48
 CX649_02945 NONE
 CX649_02950  601362 ..  601400 +  -4.8  -3.25088   TGAACGTTTGAACTT  TCACATTATTTTTTGCG GTAATA CGCGAAAAA-GATGTGG   TTGGTAAATTTAAAA  54 308
 CX649_02955  602707 ..  602717 +  -2.6  -2.87132   CTTTTAAGGATGTTT                 TAAA AAT TTTA                 TATATAAAAAGGAGC  42 34
 CX649_02960  604203 ..  604234 +  -7.4  -5.18371   AACTATATGAATAAG      CCTCACACTT-CTTT TTT ATAGTAGGTGTGAGG      TTTTATTTTGTGAAA  88 273
 CX649_02965  605749 ..  605775 + -11.6  -2.79322   TGCGGATTCTCGAAA         CAGGCTATCAGC TTT GCTGACAGCTTG         CTATTATTTCTCTGA  83 181
 CX649_03005 NONE
 CX649_03010  614585 ..  614624 + -10.2  -2.72471   ATATGGCAGCAGAAA  AGCATAAAAGCAGTCT AGACTTGC GGACTGCTTTTATGCC   GTTGTGTGCTGAACA  78 183
 CX649_03020 NONE
 CX649_03025 NONE
 CX649_03030  618624 ..  618649 +  -9.1   -5.0538   TGGAAAACATGTTTT         TAGATCGATCT AATA AGATCGATCAA          TTTTTTGCCGTCAAA 100 52
 CX649_03035  619424 ..  619442 +  -4.5  -4.16842   TCTCCATTTTTTAGT             TCCTCCA TTCGT TGGCGGA             TTTCTTCAAAATCAA  63 308
 CX649_03070  625989 ..  626002 +  -5.3  -3.53811   ATTTTTTTTGATTTA               TCACA TCAT TGTGA                TTTAGAAAAAATGAA  59 242
 CX649_03080  627142 ..  627163 +  -3.1  -3.90112   AAAATAACTTTTCAA           TTAATAAAG GCTG CTTTGTTGA            TTTCGTTGCAAAAGA  55 34
 CX649_03085  628322 ..  628334 +  -2.6  -4.20516   TCAAAGCTTCGCTGC                CCGG CGCAT TCGG                TTTATTAGCTGAAAG  55 260
 CX649_03090  629255 ..  629282 +   -15  -4.91109   ATATATGGCAAAAAA        CCTGCCTGTTTA TGTT TGAACAGGCAGG         TTTTTATCATGCAGC 100 94
 CX649_03110  634128 ..  634168 +  -9.1  -4.55826   ACTAAATAAAAAGCC GGGGCAGTTCA-AAGTCG TTTTTT CGGCTTATTGACTGCCCC  TTTTAATGTTTTAGA  93 47
 CX649_03125 NONE
 CX649_03130 NONE
 CX649_03135  639567 ..  639580 +  -8.1  -5.93809   TCGATCATGAACATG               GACGC ATTG GCGTC                TTTTTTTTGTGCAAA 100 44
 CX649_03140 NONE
 CX649_03145 NONE
 CX649_03150  643619 ..  643630 +  -2.2  -4.74052   GACCTTCTTGGAAAT                TTCG GAAT CGAG                 TTATTTTTGTTTGAT  64 205
 CX649_03160  645928 ..  645942 +  -2.9  -3.61371   CGAAAGAGGTATAAT               TCAAT TTTAT ATTGA               TTTCAAATAAAATTT  48 27
 CX649_03165  646890 ..  646921 +  -4.6  -5.54192   AGGAAAAGAATGAGG     CTGGAC-T-GGATG AAAAAA CATCCGAAGTCCAG      TTTTTTTAGATTCGT  82 53
 CX649_03175  648678 ..  648697 + -10.7  -4.07568   AAAGATCGTTCTTAG            GGCGGCT GTGTAA AGCCGCC             TTTTGAAAGGAGAAC  93 39
 CX649_03180  650177 ..  650194 +  -5.5  -4.89233   GTAGTTCCTACGGTT             AGAAGCC TTAT GGCTTCA              TTTTTGATATTGATA  79 117
 CX649_03190  653287 ..  653316 +  -6.5  -5.14985   ATCAGACATGGAAAA       AGAGGCA-TTCCAA AAC TTGGAGCTGCCTCC       TTTTTATATATTTGA  84 59
 CX649_03195 NONE
 CX649_03200  655290 ..  655314 +  -7.9  -3.03811   GGACAAGTTTAGAAG          CTCCCATCT CTCATGT GGATGGGAG          TGATTTAAATTTTTA  66 29
 CX649_03210 NONE
 CX649_03215  657652 ..  657680 +  -7.4  -5.40625   GAAGTAGTAAAATTG        AGCGGCAAAAGA AACGA TCTTCTGCCGCC        TTTTTTATGTACTAT  93 34
 CX649_03220 NONE
 CX649_03225 NONE
 CX649_03230  659780 ..  659799 + -10.8  -4.20007   AGATTGAAAAAATGT            CCACAGTT GCGA AACTGTGG             TATTTTTGATTTTTG 100 110
 CX649_03235 NONE
 CX649_03240 NONE
 CX649_03245  661663 ..  661674 +  -2.2  -2.55034   CAAGTGGTGAAATGG                CTTC GTTA GGAG                 GATTTTATGGCGTTT  39 17
 CX649_03250 NONE
 CX649_03255 NONE
 CX649_03260 NONE
 CX649_03265 NONE
 CX649_03270  664909 ..  664933 +  -3.6   -5.0916   TTTTTTAATTGTTGG          GACAATCG GATGGATAA CGGTTGTC          TTTTTATGTTGAAAA  73 33
 CX649_03275  667172 ..  667198 + -10.8  -5.25803   ATAACAACAGAAATC         ACGGCTGTCGGC AAA GTCGACAGCTGA         TTTTTTATCAACCTT 100 41
 CX649_03285 NONE
 CX649_03290 NONE
 CX649_03295  668320 ..  668332 +  -3.3   -2.8294   GTGTAAGCGGCGCGA                GGGTT CAA ATCCC                TCCTTCTCCGCCATG  44 0
 CX649_03300  668438 ..  668467 + -15.3  -2.64472   TCATTCATATTCGCT       GAAATAGGAAGTT GAAA AACTTCCTATTTC        TAACTTTAAAAAATC 100 35
 CX649_03305 NONE
 CX649_03310 NONE
 CX649_03315 NONE
 CX649_03320 NONE
 CX649_03325 NONE
 CX649_03330  669227 ..  669241 +  -4.2  -3.09518   GGGACCATGGGGTCG               CAGGTT CGA ATCCTG               TCTTCCCGATTTTGA  50 1
 CX649_03335  669684 ..  669695 +  -5.8  -3.75153   TCGAGCGGACCGAAG                GGAG CTTG CTCC                 TTTAGGTTAGCGGCG  65 174
 CX649_03365  677456 ..  677481 + -11.2  -4.35682   GCTGTAAAATAGAAA         GGAGCGGGAA CTCATC TTCTCGCTCC          TTGTTTTAATTGTGA 100 34
 CX649_03385  681904 ..  681925 +  -8.1  -2.68434   CCAGTAGAGTTTATT           CATGGAAAG AAAG CTTTTCATG            TAATATAATGTAAAC  66 34
 CX649_03390  682347 ..  682384 + -13.7  -4.05877   GCTATAGTCAGTAAA   GAAACCCAA-CCGCAAAT TTA ATTTGCCGATTGGGTTTC   TTGTTTCATCTCATC 100 114
 CX649_03435  688657 ..  688701 +  -9.5  -5.52986   AATAATAAAAATGCT TTAAGCGGCTTGAGCTC TACATTCTAAT GGGCTTAAGCCGTTTAA TTTTTTTGATAACGT 100 86
 CX649_03440 NONE
 CX649_03445  689939 ..  689971 + -17.2  -4.05033   TTTTAAACAAAAACA      TAAGCCTTTCGGGG ATTTG TCCCGAAAGGCTTA      TTTATATGGAATAAA 100 35
 CX649_03495  697086 ..  697112 +    -3  -5.69262   CATACACTGAATATT         CGATGTCTCA AAACAGG TGAGGCATCC         TTTTTCTTTTTATAA  82 31
 CX649_03500  699030 ..  699050 +  -5.5  -5.44721   AGAGAATTGAAGTTT            TATGTCAGA TTA TCTTACATA            TTTTTTTACGCTGAT  84 266
 CX649_03505  700286 ..  700296 +  -2.6  -2.64472   TGTCTGCAAAAATCA                 TAAA CTG TTTA                 TGCGTTTCAGGCATG  41 204
 CX649_03530  706436 ..  706449 +  -3.9  -4.17089   GCAGGATTTTTCATT               TGATT TTGT AATCA                TTTTGACGATTTGCA  59 120
 CX649_03540 NONE
 CX649_03545  708267 ..  708284 + -11.3  -3.83927   TTGTTATGCTATAAG             GGCGTAG TTCT CTACGCC              TTTCCATATTTATGT  90 47
 CX649_03550 NONE
 CX649_03555 NONE
 CX649_03560  710796 ..  710807 +    -3  -4.66388   CACAAATACAGGAAA                TTTC ATTC GAAA                 TTTATTTATCATTTT  65 91
 CX649_03580  716585 ..  716621 + -11.8   -4.2092   AAGATAAGTAGCAGT   ATTCCAAAA-AGGGGGA ACAA TCCCCCTCTTTTGGAAC    TTATTTATCATTTTA 100 30
 CX649_03610  722584 ..  722615 +  -4.4  -5.77853   TTGAAACTCGTATAA      CCTTTTTCCTTACA TATT TGCTTGGAAAAAGG       TTTTTTTTAAAACTT  91 47
 CX649_03640  729540 ..  729586 + -18.3  -4.62783   ACGGGCATGGAGGGC ATTAAGGAAAACCGGGCGT GAAAATTGA ACGCCCGGTTTTCCTTAAC TTTTTAAAGTAAATA 100 21
 CX649_03655  731519 ..  731539 +  -9.1  -4.43859   AATTATTAAAATATT            TTTAGTCGA TTG TCGACTGAA            TTTTATCGAATTATA  93 76
 CX649_03675  735207 ..  735217 +  -5.4   -4.4009   TCTTATAATGCATTG                 TCGA TCG TCGA                 TTTTGTAAGCTGGGG  69 103
 CX649_03680  736701 ..  736754 + -11.3   -2.6989   ATCTTTTGGATAAAA CAAACACCTCCATTCATCGAATTTAT TTG ATGCATTCGAC-ACTGGAGGTGTTTG TCCCTTTCCTCATTT  83 140
 CX649_03695  740018 ..  740038 +    -9  -5.45652   AAAAATAATGAAAAA            GGGTATCC ATCAC GGATGCCC            TTTTTTGTTGGAAAT  95 33
 CX649_03710  742682 ..  742705 +   -11   -4.5493   AATGACATTACAATG          CGCCCTCTTT TATT AAGGGGGGCG           TTGTTTTGTTTAAAT 100 40
 CX649_03735  748790 ..  748815 + -11.2  -4.35682   GCTGTAAAATAGAAA         GGAGCGGGAA CTCATC TTCTCGCTCC          TTGTTTTAATTGTGA 100 34
 CX649_03755  753238 ..  753259 +  -8.1  -2.68434   CCAGTAGAGTTTATT           CATGGAAAG AAAG CTTTTCATG            TAATATAATGTAAAC  66 34
 CX649_03760  753681 ..  753718 + -13.7  -4.05877   GCTATAGTCAGTAAA   GAAACCCAA-CCGCAAAT TTA ATTTGCCGATTGGGTTTC   TTGTTTCATCTCATC 100 114
 CX649_03805  759991 ..  760035 +  -9.5  -5.52986   AATAATAAAAATGCT TTAAGCGGCTTGAGCTC TACATTCTAAT GGGCTTAAGCCGTTTAA TTTTTTTGATAACGT 100 86
 CX649_03810 NONE
 CX649_03815  761273 ..  761305 + -17.2  -4.05033   TTTTAAACAAAAACA      TAAGCCTTTCGGGG ATTTG TCCCGAAAGGCTTA      TTTATATGGAATAAA 100 35
 CX649_03865  768420 ..  768446 +    -3  -5.69262   CATACACTGAATATT         CGATGTCTCA AAACAGG TGAGGCATCC         TTTTTCTTTTTATAA  82 31
 CX649_03870  770364 ..  770384 +  -5.5  -5.44721   AGAGAATTGAAGTTT            TATGTCAGA TTA TCTTACATA            TTTTTTTACGCTGAT  84 266
 CX649_03875  771620 ..  771630 +  -2.6  -2.64472   TGTCTGCAAAAATCA                 TAAA CTG TTTA                 TGCGTTTCAGGCATG  41 204
 CX649_03900  777770 ..  777783 +  -3.9  -4.17089   GCAGGATTTTTCATT               TGATT TTGT AATCA                TTTTGACGATTTGCA  59 120
 CX649_03910 NONE
 CX649_03915  779601 ..  779618 + -11.3  -3.83927   TTGTTATGCTATAAG             GGCGTAG TTCT CTACGCC              TTTCCATATTTATGT  90 47
 CX649_03920 NONE
 CX649_03925 NONE
 CX649_03930  782130 ..  782141 +    -3  -4.66388   CACAAATACAGGAAA                TTTC ATTC GAAA                 TTTATTTATCATTTT  65 91
 CX649_03950  787919 ..  787955 + -11.8   -4.2092   AAGATAAGTAGCAGT   ATTCCAAAA-AGGGGGA ACAA TCCCCCTCTTTTGGAAC    TTATTTATCATTTTA 100 30
 CX649_03980  793918 ..  793949 +  -4.4  -5.77853   TTGAAACTCGTATAA      CCTTTTTCCTTACA TATT TGCTTGGAAAAAGG       TTTTTTTTAAAACTT  91 47
 CX649_04010  800874 ..  800920 + -18.3  -4.62783   ACGGGCATGGAGGGC ATTAAGGAAAACCGGGCGT GAAAATTGA ACGCCCGGTTTTCCTTAAC TTTTTAAAGTAAATA 100 21
 CX649_04025  802853 ..  802873 +  -9.1  -4.43859   AATTATTAAAATATT            TTTAGTCGA TTG TCGACTGAA            TTTTATCGAATTATA  93 76
 CX649_04045  806541 ..  806551 +  -5.4   -4.4009   TCTTATAATGCATTG                 TCGA TCG TCGA                 TTTTGTAAGCTGGGG  69 103
 CX649_04050  808035 ..  808088 + -11.3   -2.6989   ATCTTTTGGATAAAA CAAACACCTCCATTCATCGAATTTAT TTG ATGCATTCGAC-ACTGGAGGTGTTTG TCCCTTTCCTCATTT  83 140
 CX649_04065  811352 ..  811372 +    -9  -5.45652   AAAAATAATGAAAAA            GGGTATCC ATCAC GGATGCCC            TTTTTTGTTGGAAAT  95 33
 CX649_04080  814016 ..  814039 +   -11   -4.5493   AATGACATTACAATG          CGCCCTCTTT TATT AAGGGGGGCG           TTGTTTTGTTTAAAT 100 40
 CX649_04100  817576 ..  817586 +  -2.4  -3.81146   GTGAGTGAGGGGCGT                 CCGG CAC CAGG                 TTATTCCTTCACAGA  50 151
 CX649_04120 NONE
 CX649_04125  822365 ..  822409 +  -9.4  -4.14792   TTTCTAAAGCATTAA TGGGGGCG-TCAATAAGCCGT AAAA ACGACTTATTAAACACCCCCA TTCTCTTTTTGATTT  89 115
 CX649_04130 NONE
 CX649_04135 NONE
 CX649_04140 NONE
 CX649_04145 NONE
 CX649_04150  826705 ..  826717 +  -2.7  -4.10429   ATTTTCGAATTAAAA                CAAAG TCA TTTTG                TTTTCAAAAATGATT  55 232
 CX649_04155  828040 ..  828075 + -10.6  -4.78848   GCAAATATTCTTAAA    CCCTTGGGCA-ATCC AGTAAAA GGATTTGTCCAAGGG    TTTTATGTTTGCCGA 100 322
        mmsA  831182 ..  831195 +  -5.3  -3.53343   AAAGAGAGCGCGACG               GCTTT GTCA AAAGC                TTTAAGAAAACAATT  59 115
        iolB NONE
        iolC NONE
        iolD NONE
        iolE  835998 ..  836010 +  -3.4  -3.26204   AATGTCACCCGTTAA                TCGA AACAA TCGA                TTCGTAACTTTGATT  47 87
 CX649_04190 NONE
        iolG NONE
 CX649_04200 NONE
 CX649_04205  840706 ..  840716 +  -2.6   -2.8185   GCAAGAAAGACTAAC                 TTTT TCA AAAA                 TAGTGTTAATATTTA  42 27
 CX649_04210  841823 ..  841845 + -13.5  -2.82519   TAAAAGCATTAAATA           GCTCGAGCT TCTTT AGCTCGAGC           TCATTAATATAATGA  89 97
        iolG  842989 ..  843001 +  -2.7  -3.31726   AAAAAAATTCGTTGT                TTTTC ATT GAAGA                TCTTGTATAGAAAAC  45 54
 CX649_04220  844137 ..  844152 +  -3.2  -2.87132   TCGATTTGATTTTCT              GATTCC TTAT GGAACC               TATGTACAAGAACAA  44 218
 CX649_04225  844560 ..  844584 +  -4.3  -2.94144   TTGGTATGATTCGGG          GGTGTCAAT CGGATGA ATTGACCCC          TAATTTGGATACCAA  48 162
 CX649_04230  846374 ..  846385 +  -7.2  -4.21141   CTAAAGGATTTGTTG                CCGG ATAT CCGG                 TTTAGTTTGTTACCA  75 510
 CX649_04250  852277 ..  852302 +  -9.7  -4.76311   AAATTCCTTATCCTC         AGGCTGTCGAG AAAC TTCGACAGCCA          TTATTTTTATTTATA 100 83
 CX649_04340  867592 ..  867625 + -14.1  -5.06585   GTCCCTAAAATCCAA     CAAGTAGAGGAAAAC ATGC GTTTTTCTCTGCTTG      TTTTTATATGCTTTC 100 71
        phnG NONE
        phnH NONE
 CX649_04355 NONE
 CX649_04360 NONE
        phnK  871678 ..  871689 +    -3  -2.92513   CAGCAGCTCGTCCAT                TCAT TATT ATGA                 TCAATTTTTTGGACT  44 14
 CX649_04370 NONE
 CX649_04375 NONE
 CX649_04380  874309 ..  874321 +  -2.7  -2.86944   GTAATTCAACGATAT                GAATT AAC AGTTC                CTTTACATTCATCCT  42 51
 CX649_04385 NONE
        phnC  876221 ..  876231 +    -4  -3.84825   TGGGTCTGAAGTAAA                 GAAT CTG ATTC                 TTTAATGTAGGTGAA  55 10
 CX649_04395 NONE
 CX649_04400 NONE
 CX649_04405  879195 ..  879208 +  -6.7  -3.76815   AATTTTTACTTTTTT               GCCTA TCAT TAGGC                TTTCGGCTTTTCGGT  66 370
 CX649_04410 NONE
 CX649_04415 NONE
 CX649_04420 NONE
 CX649_04425  883159 ..  883210 +  -9.7  -2.57503   AACGTTTCTAAAACA TTAAAGGGGC-GTCT-ATAAGCCGG AAAA TCGACTTATTAGACAGCCCCTTAAA AATTTGTTTCAGTTT  75 266
 CX649_04435 NONE
        surE NONE
 CX649_04445 NONE
 CX649_04450  889859 ..  889879 +  -2.5   -3.2048   TTGGAGACGAAAGGT            GTTGAAACA AAA TGATTCGGC            TTGATGGGATTTCAA  45 1
 CX649_04455  891014 ..  891038 +  -7.2  -5.47914   CTAATCTGCTTGAAA         GTACCC-TCTC AAAT GAGATGGGTGC          TTTTTTGTCATTTTT  93 99
 CX649_04460  891638 ..  891649 +  -2.2  -3.31883   ATATATTTACCAAAT                G-GGC AGT GCCAC                CTTTCTTTAGGTTTT  44 124
 CX649_04465  893303 ..  893313 +  -5.4  -3.35542   CCGGAGGCAGTACCA                 GAGT ATC ACTC                 GTTTTTGAAAATAAG  57 324
        moaA NONE
 CX649_04475 NONE
 CX649_04480  896621 ..  896648 +  -9.3  -4.85433   TATTAAACAAAAATA        GGGATAACAAT AGATTC ATTGTTGTCCC         TTTTTAAATTTGTGT 100 25
 CX649_04485 NONE
 CX649_04490 NONE
 CX649_04495 NONE
 CX649_04500  901080 ..  901098 +  -3.1  -3.23165   AACGGTTGATCTCCT             CCATACG CTTGT CTTATGG             TGCTTTTATATAGTA  47 67
 CX649_04505  901595 ..  901617 +  -9.2  -5.65177   GACTTCTAACATTAA           ACGACTTCTA ATT TAGAAGTCGC           TTTTTTTGTGCATGT 100 32
 CX649_04510  903169 ..  903186 +  -7.1   -4.5493   CAAAAAGAAGCAGCC             GAAACAA GCGG TTGTTTC              TTCTTTTCTTTGCAT  80 55
 CX649_04515  903849 ..  903883 +   -18  -3.97388   AAACTATCATAAAAA     CGGCTTTAGCCCTGTG TTC TAAAGGGCTAAAGCCG     TTTATAATCGACTGT 100 92
 CX649_04525  908374 ..  908409 +  -7.7  -6.24157   AAAACATACTAACAA    TAGTAGTGCAGACCA CGGCCA TGGTTTGTGCTGCTA     TTTTTTTTTATAGAT 100 55
 CX649_04530  909367 ..  909396 +  -7.7  -3.40073   ATAGCTATCAATATA       GGGGAGAAGGCGG GGAA CTGCCAACTTCCC        TTGATTGCTAAAAGT  69 37
        tapA  910281 ..  910293 +  -4.9  -2.77569   AGCAAAACGAACCAC                CTTTA CAG TAAAG                TGATTACAATTATTT  51 15
 CX649_04540  910954 ..  910977 +  -2.4  -4.04355   ATAATGGAGGAAATA          CATGGTCAAA TCAA TTGGACGATG           TTTCATATGTTTTTT  52 37
 CX649_04545  912059 ..  912070 +  -4.4  -3.09681   TTGATTGAAGATTCC                GTTC GATA GAAC                 TTAAATAAGATTTTG  51 497
 CX649_04575 NONE
 CX649_04580 NONE
 CX649_04585 NONE
 CX649_04590 NONE
 CX649_04595  918365 ..  918381 +  -2.3  -4.21439   AAAGAAATTCGCTTT              GAAAAAT AAC AATTTTC              TTTCTGTTACCATTA  54 17
 CX649_04600  919492 ..  919516 +  -4.3  -3.03573   GTCTAAAAGAGCTGA          GCTGCCA TAACTACAAAT TGGCAGC          CATTTTTTTTGCATA  50 152
        pdhA NONE
 CX649_04610 NONE
 CX649_04615 NONE
        lpdA  924469 ..  924525 +  -8.6  -4.01925   CGTGATGTAAAAAGG GCTTATTTAC-AA-TTGTTATACTAATT AAC ATTTAGTAAAACAAATTTGTAAATAAGC TCTTATTTTTTTCCT  82 44
 CX649_04625  925768 ..  925778 +  -3.2  -2.70932   TTTTTTATACAATTG                 GGTT TCT GACC                 TAATTAGGAGGAAAG  43 176
 CX649_04630  926242 ..  926259 +  -3.5  -4.11216   AAAGAAATCGCTGCA             TATTTGG AATC TCAAATA              TTTTAAAAATAAACA  57 2
 CX649_04635 NONE
 CX649_04640  927996 ..  928031 +  -8.5  -6.07969   TTTGATTGAACATGG    CTCCAACTCTCAAATC ATTAA GTTTTGA-AGTTGGAG    TTTTTTTTGATTTTG 100 95
 CX649_04655  932051 ..  932072 + -10.9  -5.63504   TTTCAGCAAAAAATG           GACTGTCCGC GAG GCGG-CAGTC           TTTTTTTATGGAATT 100 52
 CX649_04660  934043 ..  934077 +  -8.8  -3.81853   ATAACAAATCAAAAG     GAAAAGGATGCT TTAAAGAATTC AGCATCCTTTTC     TGTTTTGATATTGAA  79 53
        manA  935161 ..  935205 + -25.3  -5.63517   TGTATAAAACATTTA TCCCGACTCTTCTTTCTCCTT TTA AAGGAGGGAGAAGAGTCGGGG TTTTTTATTTGAAAA 100 34
 CX649_04675  936856 ..  936872 +  -2.2  -5.55769   AATGCTGCTGAATGA              TTCTCG GCTTG CGGGGA              TTTTTTATTATAGGG  74 39
 CX649_04685  939319 ..  939333 +  -5.7  -3.92641   AAGCTTCGCCAATGA               GTCGA AAGGG TCGAC               TTTATGAATCAAATT  63 469
 CX649_04690  940752 ..  940774 +  -9.2  -3.82481   TTAACCATAATACTT           GAGCTGTTGA ATT TTGACAGCTC           TTGTTGACTTTTAAT  81 24
 CX649_04695 NONE
 CX649_04700  942956 ..  942997 + -12.6  -3.97834   TCAGTTTTTAGCAGA TGCCTTTTCTCCAACAAAA TATAT TATTGTTGG-GAAAAGGCA TTTCTCATGAACTTA 100 54
 CX649_04705  944484 ..  944502 +  -8.9  -5.00884   TCTTAAAAATTTTTA             CCTATCC CAAGT GGATAGG             TTTTTTAAAAGAAGT  95 56
 CX649_04710  945322 ..  945338 +  -2.9  -3.37732   TTTAGGGAGGGTAGT              CATGGAT ATT GTCCAAG              TTATAGCATTAATAT  47 36
 CX649_04715 NONE
 CX649_04720  946113 ..  946123 +  -2.6  -4.01137   ATTAGTTAGGAAACA                 TTAT TCA ATAA                 TTATTATATTGCTTT  53 85
 CX649_04725 NONE
 CX649_04730  950901 ..  950944 +  -8.6  -6.04324   ATATTTTCATGGAAA TCTCTTGACTTAAAATTGC GTAAAGA GTAATTTTAA-TCAAGAGA TTTTTTCTTTTTTAA 100 223
        mviN  952977 ..  952988 +    -3  -3.61164   GAATTGGCGGGATTT                CAAT TTAT ATTG                 CTTTTTTAACAGGTT  48 312
 CX649_04745 NONE
        galU  955971 ..  956012 + -13.2  -5.67967   GAACTAACGCGAAAG GAGCTGTCCCA-AAGTCAG GAGAA CTGACTTATGAGGCAGCTC TTTTTTTATAGTAAT 100 34
 CX649_04755  957493 ..  957508 +  -3.3  -3.85159   AACGCCAAGATATTG              CCAAT GCTGAA ATTGG               TTGTTAAGTTTTTCC  54 347
 CX649_04770 NONE
 CX649_04775  961355 ..  961369 +  -5.8  -2.80464   TTAATTCCCACTTTC               CTTAAA TAT TTTAAG               ATTTCAAGTTCATCA  52 506
 CX649_04785  963020 ..  963034 +  -2.8  -4.78107   TGTGTGGTGAAGTGG               TTTCAG GAG CAGAAA               TTTTTCCTACTCCTA  63 210
 CX649_04790 NONE
 CX649_04795 NONE
 CX649_04800 NONE
 CX649_04805 NONE
 CX649_04810 NONE
 CX649_04815 NONE
 CX649_04820  970761 ..  970778 +  -6.3  -2.53908   TAAATATTAAAAAGA             GAGTGTG TTAA CACATTC              ATTGCTGGTGAATTT  56 38
        pseG NONE
        pseI NONE
        pseC NONE
 CX649_04840  975394 ..  975443 +  -2.9   -2.9676   TATGTGGAATTTTTT GGCAATAATACTTTTGCTCTCTC AATG GGGAAAACAAACCTATAATTGCC TAAGTTTTTTGTCAT  43 232
 CX649_04850  976141 ..  976176 + -11.3  -5.93252   CTTCCTTTGAAAAAG    CAGCTGCAAC-CTGAA TTTCT TTCTGAGTTGCAGCTG    TTTTTTCTTTTTAAG 100 57
 CX649_04855  978005 ..  978036 +  -7.4  -4.39166   AAATCTAATATATAA      TCCCGCAGAAATACT TTA AG-AATTCTGTGGGA      TTTTGGTATGTGAGC  81 77
 CX649_04875  981548 ..  981564 +  -2.9  -2.71011   CTAGACATATTCCAG              CGCTCAG CAC CTGAATG              TACTTGAGACAAACT  41 71
 CX649_04880  982691 ..  982733 + -11.4  -2.77013   TCTAAAACATAAAAA GGGGCCGTC-AATAAGCCG AAAAAA CGACTTATTAGACAGCCCC ATTCTTGAAGAAATA  83 212
 CX649_04885  983525 ..  983560 +  -9.9  -4.20834   CGGCCTTTTGAAATA    GACATGAATCTCC TAGCAAAAAT GGAGGTTCATGTC     TTTCGTTATTTTACC  93 129
 CX649_04890  984942 ..  984969 + -10.6  -6.04324   ATAACTAGATAATAC        GGGTGCCGAAAG CTTC TTTTTGGCGCCC         TTTTTTATTTTTTGA 100 37
 CX649_04910 NONE
        gabD  990315 ..  990349 +    -8   -4.1899   TGGATATCCAAAAAA    GTGTGGAAAGAGGGT AAAAAC ACCCTCT-TCCATGC     TTTTAGCTACAATAG  81 44
 CX649_04930  993473 ..  993483 +  -2.6  -3.25823   ATTGACAAGATTATG                 TTTT TTC AAAA                 TTGATCTGGAGGGGA  45 139
 CX649_04935  994507 ..  994535 +  -4.5   -5.4588   TCAAATAAAATGACA        AAACGGCGGGG CATGTGT TCTCGCCGTTA        TTTTTTATCATTTTG  82 33
 CX649_04940  995760 ..  995798 +  -9.1  -6.17669   GTCATGCAGGCAAAA  CCTAAATTGTTTCGTCAT TTTT ATGGCG-GGCAATTTAGG   TTTTTTTATTTTCTT 100 157
 CX649_04945 NONE
 CX649_04950  998962 ..  998974 +  -3.5  -4.57569   GGTTCAGGTTTTTTA                TATAT CAA ATATA                TTTTTGGGAGGGTCA  62 170
 CX649_04955 1001397 .. 1001431 + -12.3  -5.42259   ATATACACGGAAGGA     TAAAAGCCTGGGAGA TCTAT TCTCTCTGGCTTTTA     TTTTTTTAAAGCTGA 100 492
 CX649_04960 NONE
 CX649_04965 NONE
 CX649_04970 NONE
 CX649_04975 1006175 .. 1006205 + -12.1  -5.40474   ATAAACACGGAAGGA      TAAAAGCCT-GGGA GATT TCCCTAGGCTTTTA       TTTTTTTACAACGAT 100 269
 CX649_04980 NONE
 CX649_04985 NONE
         uca NONE
        atzF 1013176 .. 1013196 +    -9  -4.66833   ATTCATAATACAAAA            GCCGTCAA ACATG TTGGCGGC            TTTTTCACGTTCAAG  93 33
 CX649_05000 1013866 .. 1013912 +  -4.1  -3.15861   TACTCAACATTTTGA TGTAGTGTTGCAA-GAAATTG ACGGCAC CGATTTTATTGCAACACT-CA TTGATCAAGATACTG  51 26
 CX649_05005 NONE
 CX649_05010 1014921 .. 1014932 +  -4.4  -3.63627   TCTGTAAAAAATTAG                GGAT ACAA ATCC                 TTTAGAGTATAGGAA  55 44
 CX649_05015 1015502 .. 1015548 + -15.6  -3.86903   CAACATTTATTAAAT GGAGAGATGCTTC-CAAAAGTT TGAAC AACTTTTGTGAAGCATC-CTCC TGTTTTAATTATGTG 100 189
 CX649_05020 NONE
 CX649_05025 1017891 .. 1017925 + -11.5  -3.93166   TAATAAACGTAGCAA     GCAGCCCGATTCCTA TATAC TAGGAGTTTGGCTGC     TTAATTTTTTGGAAG  93 87
 CX649_05035 1022537 .. 1022562 + -11.9  -3.17219   TTCAACAATACAAAA         GAGCAATAGCC TATT GGCCATTGCTC          TTCATGAAAATTCTC  89 44
 CX649_05040 NONE
 CX649_05045 NONE
        xylB NONE
 CX649_05055 NONE
 CX649_05060 1028147 .. 1028164 +  -4.2  -3.59979   AGTTCGATTGAAGTG             TCCTTT ATGTCA AAAGGA              TTTGGAATACAAAAC  55 47
 CX649_05065 NONE
 CX649_05070 1030264 .. 1030288 + -14.3  -3.32268   ATAATAACCTGAAAG          CTGGGGATGCA TTT TGCAGCCCCAG          TTATACAAATACTTG  95 37
 CX649_05075 1031027 .. 1031055 +  -2.4  -4.17316   AAAAGTATCGGGCCA        GTCTGTTAAAGA AGAAG TCATAAACAGGC        TTATTTTACGGGAGT  54 3
 CX649_05080 NONE
 CX649_05085 NONE
 CX649_05090 1036049 .. 1036091 + -12.2  -4.07678   ATTAATACAAAATAC GGGGGTGTCTAATAAGTCG CTTTTA CGGCTTATT-GATGCCCCC TTTAATGTTTTGAAA  95 36
 CX649_05110 1040266 .. 1040282 + -10.9  -2.59079   ATTGTAGCGAAACAG              TGTAGCG ATT CGCTACA              ATTCATCATTCTCTT  81 416
 CX649_05115 NONE
 CX649_05120 NONE
 CX649_05125 1045436 .. 1045473 +  -9.3  -4.86731   ACAATCGAACAGCAA   GTGGATAACC-TAGTGTT TTC ATCACAAAGGTTATCCAC   TTTTATTTAAAGCAG 100 79
 CX649_05130 1047973 .. 1047987 +  -3.5  -4.06089   TTTAAAACAAAAAAA               TGCCT AGGCA AGGCG               CTTTTTTTTACGGTG  55 108
 CX649_05135 1048556 .. 1048582 +  -8.8  -5.50723   GAAGTAAATTTTCAA         GGGAATTCCTTT TTT GAAGGAGTTTCC         TTTTTGTTTTCCTGG  95 34
 CX649_05140 1051135 .. 1051158 +  -4.6  -3.76839   ATGTTGCTGATGATT          TTGCTGTAAC TGTT GTAACAGTAA           TTTAAGTTCCGGTTG  56 434
 CX649_05150 1052281 .. 1052299 +  -6.8  -4.67353   AAATATCCATCGCCC             GTTTCGTT TAT AATGAAAC             TTTTTCAATGAATGC  80 169
 CX649_05155 NONE
 CX649_05160 NONE
 CX649_05165 1054209 .. 1054226 +    -7  -4.44667   AAGATGAGTAAAAGA             GGACCT GTTAAA AGGTCC              TTTGTTGTTGAGGAG  78 30
 CX649_05170 1055984 .. 1055999 +  -3.2    -4.386   ACAAAAAATCGTTAA              CGTCGA TATT TCAACG               TTTTCTAAAACATTA  60 80
 CX649_05180 1059466 .. 1059485 +  -2.2  -3.15841   ATTTCATTTTATATT            TTCTATAA TAAT TTACAGAA             TATTAATAAAGTTAT  44 111
 CX649_05185 NONE
 CX649_05190 1061292 .. 1061304 +  -4.1    -4.323   TGACTCAGGATGCTT                CGTGT CTT ACATG                TTTTGAATATTTGCG  64 138
 CX649_05195 1063033 .. 1063044 +  -5.8  -4.15698   TTGGTTTCTTTACAC                TGCC GGCC GGCA                 TTATTTATGTAACTC  69 165
 CX649_05205 1065611 .. 1065662 + -15.6  -4.12198   ATTTCGATTTTTGTT TGAAGGGGCTGTCCAAAAAGTCAG GGTTAA CTGACTTTTTGG--AGCCCCTTTA TTTTAGGGACTTATC 100 217
 CX649_05210 NONE
 CX649_05215 NONE
 CX649_05220 1068176 .. 1068210 + -12.3  -4.03234   AAATTATGCAAAATA    GCAGCCTTGTCTTCTT ACAG ATGAAG-CAAGGCTGC     TTTATGTGCGCCCGG 100 199
 CX649_05245 NONE
 CX649_05250 NONE
 CX649_05255 1074669 .. 1074702 +   -12  -5.75538   ACGAGGTTTTCAAAA     CCCCTTTTTC-ACAA AGCTA TTGTTGAAAAAGGGG     TTTTTGTTTTTTAGC 100 95
 CX649_05265 1076124 .. 1076135 +    -3  -2.64155   AACTAGGGGTGGAAA                CAAT GCGA ATTG                 TCGGTTTGGCAAGCG  43 39
 CX649_05270 1077587 .. 1077607 +  -2.5  -4.05229   ATGCAATTATTTGGA           GGC-GGCG CTTAAT CGTCTGCC            TTTACTATTTACTTT  53 14
 CX649_05275 NONE
 CX649_05280 NONE
        raiA 1079154 .. 1079175 +    -8  -5.53288   ATTATATATAAAAAA           GTGCAGCC TACCTT GGCTGTAC            TTTTTTTACCTTCAA  93 46
 CX649_05290 1081849 .. 1081882 +  -7.3  -2.95904   CGATTTTAAATAGAA     TGGGTGTGGCGAGAT GTCA GTCTCGCCTGTCCCA      TAAATTTTTTAATTA  62 41
        prfB 1083263 .. 1083301 +  -9.7   -5.8096   TTTAAAACATTAAAG  GGGCGTCT-ATAAGGCGT AAAA ACGACTTATTAGACACCC   TTTTTCTTTTTTATC 100 216
 CX649_05300 1083773 .. 1083796 +  -8.9  -5.34555   AAAGTAACATAAGAA          GCGAGGG-GA CATGA TCACCCTCGC          TTTTTTATGCTATAG  95 34
        ftsE NONE
 CX649_05310 NONE
 CX649_05315 1087015 .. 1087066 + -17.8  -5.66684   TTCCATAAAATTTAT TAACAATGCACAATAAGCTCTT AAGGGAAG AAGAGTTTGTTGTGCATTGTTA TTTTTTTATAAATTG 100 33
 CX649_05320 1088990 .. 1089046 + -10.4  -4.09739   TTTTATTTTGCATTT TGTTTAAGGGGCTGTCTAATAAGTCGT TTTT ACGGCTTATT-GACGCCCCCTTTAATG TTTTAGAAACGTTGA 100 62
 CX649_05340 NONE
 CX649_05345 NONE
 CX649_05350 1095475 .. 1095508 +   -12  -5.75538   ACGAGGTTTTCAAAA     CCCCTTTTTC-ACAA AGCTA TTGTTGAAAAAGGGG     TTTTTGTTTTTTAGC 100 95
 CX649_05360 1096930 .. 1096941 +    -3  -2.64155   AACTAGGGGTGGAAA                CAAT GCGA ATTG                 TCGGTTTGGCAAGCG  43 39
 CX649_05365 1098393 .. 1098413 +  -2.5  -4.05229   ATGCAATTATTTGGA           GGC-GGCG CTTAAT CGTCTGCC            TTTACTATTTACTTT  53 14
 CX649_05370 NONE
 CX649_05375 NONE
        raiA 1099960 .. 1099981 +    -8  -5.53288   ATTATATATAAAAAA           GTGCAGCC TACCTT GGCTGTAC            TTTTTTTACCTTCAA  93 46
 CX649_05385 1102655 .. 1102688 +  -7.3  -2.95904   CGATTTTAAATAGAA     TGGGTGTGGCGAGAT GTCA GTCTCGCCTGTCCCA      TAAATTTTTTAATTA  62 41
        prfB 1104069 .. 1104107 +  -9.7   -5.8096   TTTAAAACATTAAAG  GGGCGTCT-ATAAGGCGT AAAA ACGACTTATTAGACACCC   TTTTTCTTTTTTATC 100 216
 CX649_05395 1104579 .. 1104602 +  -8.9  -5.34555   AAAGTAACATAAGAA          GCGAGGG-GA CATGA TCACCCTCGC          TTTTTTATGCTATAG  95 34
        ftsE NONE
 CX649_05405 NONE
 CX649_05410 1107821 .. 1107872 + -17.8  -5.66684   TTCCATAAAATTTAT TAACAATGCACAATAAGCTCTT AAGGGAAG AAGAGTTTGTTGTGCATTGTTA TTTTTTTATAAATTG 100 33
 CX649_05415 1109796 .. 1109852 + -10.4  -4.09739   TTTTATTTTGCATTT TGTTTAAGGGGCTGTCTAATAAGTCGT TTTT ACGGCTTATT-GACGCCCCCTTTAATG TTTTAGAAACGTTGA 100 62
 CX649_05435 NONE
 CX649_05440 NONE
 CX649_05445 1116198 .. 1116231 +   -12  -5.75538   ACGAGGTTTTCAAAA     CCCCTTTTTC-ACAA AGCTA TTGTTGAAAAAGGGG     TTTTTGTTTTTTAGC 100 95
 CX649_05455 1117653 .. 1117664 +    -3  -2.64155   AACTAGGGGTGGAAA                CAAT GCGA ATTG                 TCGGTTTGGCAAGCG  43 39
 CX649_05460 1119116 .. 1119136 +  -2.5  -4.05229   ATGCAATTATTTGGA           GGC-GGCG CTTAAT CGTCTGCC            TTTACTATTTACTTT  53 14
 CX649_05465 NONE
 CX649_05470 NONE
        raiA 1120683 .. 1120704 +    -8  -5.53288   ATTATATATAAAAAA           GTGCAGCC TACCTT GGCTGTAC            TTTTTTTACCTTCAA  93 46
 CX649_05480 1123378 .. 1123411 +  -7.3  -2.95904   CGATTTTAAATAGAA     TGGGTGTGGCGAGAT GTCA GTCTCGCCTGTCCCA      TAAATTTTTTAATTA  62 41
        prfB 1124792 .. 1124830 +  -9.7   -5.8096   TTTAAAACATTAAAG  GGGCGTCT-ATAAGGCGT AAAA ACGACTTATTAGACACCC   TTTTTCTTTTTTATC 100 216
 CX649_05490 1125302 .. 1125325 +  -8.9  -5.34555   AAAGTAACATAAGAA          GCGAGGG-GA CATGA TCACCCTCGC          TTTTTTATGCTATAG  95 34
        ftsE NONE
 CX649_05500 NONE
 CX649_05505 1128544 .. 1128595 + -17.8  -5.66684   TTCCATAAAATTTAT TAACAATGCACAATAAGCTCTT AAGGGAAG AAGAGTTTGTTGTGCATTGTTA TTTTTTTATAAATTG 100 33
 CX649_05510 1130519 .. 1130575 + -10.4  -4.09739   TTTTATTTTGCATTT TGTTTAAGGGGCTGTCTAATAAGTCGT TTTT ACGGCTTATT-GACGCCCCCTTTAATG TTTTAGAAACGTTGA 100 62
 CX649_05530 NONE
 CX649_05535 NONE
 CX649_05540 1136955 .. 1136988 +   -12  -5.75538   ACGAGGTTTTCAAAA     CCCCTTTTTC-ACAA AGCTA TTGTTGAAAAAGGGG     TTTTTGTTTTTTAGC 100 95
 CX649_05550 1138410 .. 1138421 +    -3  -2.64155   AACTAGGGGTGGAAA                CAAT GCGA ATTG                 TCGGTTTGGCAAGCG  43 39
 CX649_05555 1139873 .. 1139893 +  -2.5  -4.05229   ATGCAATTATTTGGA           GGC-GGCG CTTAAT CGTCTGCC            TTTACTATTTACTTT  53 14
 CX649_05560 NONE
 CX649_05565 NONE
        raiA 1141440 .. 1141461 +    -8  -5.53288   ATTATATATAAAAAA           GTGCAGCC TACCTT GGCTGTAC            TTTTTTTACCTTCAA  93 46
 CX649_05575 1144135 .. 1144168 +  -7.3  -2.95904   CGATTTTAAATAGAA     TGGGTGTGGCGAGAT GTCA GTCTCGCCTGTCCCA      TAAATTTTTTAATTA  62 41
        prfB 1145549 .. 1145587 +  -9.7   -5.8096   TTTAAAACATTAAAG  GGGCGTCT-ATAAGGCGT AAAA ACGACTTATTAGACACCC   TTTTTCTTTTTTATC 100 216
 CX649_05585 1146059 .. 1146082 +  -8.9  -5.34555   AAAGTAACATAAGAA          GCGAGGG-GA CATGA TCACCCTCGC          TTTTTTATGCTATAG  95 34
        ftsE NONE
 CX649_05595 NONE
 CX649_05600 1149301 .. 1149352 + -17.8  -5.66684   TTCCATAAAATTTAT TAACAATGCACAATAAGCTCTT AAGGGAAG AAGAGTTTGTTGTGCATTGTTA TTTTTTTATAAATTG 100 33
 CX649_05605 1151276 .. 1151332 + -10.4  -4.09739   TTTTATTTTGCATTT TGTTTAAGGGGCTGTCTAATAAGTCGT TTTT ACGGCTTATT-GACGCCCCCTTTAATG TTTTAGAAACGTTGA 100 62
 CX649_05625 NONE
 CX649_05630 NONE
 CX649_05635 1157678 .. 1157711 +   -12  -5.75538   ACGAGGTTTTCAAAA     CCCCTTTTTC-ACAA AGCTA TTGTTGAAAAAGGGG     TTTTTGTTTTTTAGC 100 95
 CX649_05645 1159133 .. 1159144 +    -3  -2.64155   AACTAGGGGTGGAAA                CAAT GCGA ATTG                 TCGGTTTGGCAAGCG  43 39
 CX649_05650 1160596 .. 1160616 +  -2.5  -4.05229   ATGCAATTATTTGGA           GGC-GGCG CTTAAT CGTCTGCC            TTTACTATTTACTTT  53 14
 CX649_05655 NONE
 CX649_05660 NONE
        raiA 1162163 .. 1162184 +    -8  -5.53288   ATTATATATAAAAAA           GTGCAGCC TACCTT GGCTGTAC            TTTTTTTACCTTCAA  93 46
 CX649_05670 1164858 .. 1164891 +  -7.3  -2.95904   CGATTTTAAATAGAA     TGGGTGTGGCGAGAT GTCA GTCTCGCCTGTCCCA      TAAATTTTTTAATTA  62 41
        prfB 1166272 .. 1166310 +  -9.7   -5.8096   TTTAAAACATTAAAG  GGGCGTCT-ATAAGGCGT AAAA ACGACTTATTAGACACCC   TTTTTCTTTTTTATC 100 216
 CX649_05680 1166782 .. 1166805 +  -8.9  -5.34555   AAAGTAACATAAGAA          GCGAGGG-GA CATGA TCACCCTCGC          TTTTTTATGCTATAG  95 34
        ftsE NONE
 CX649_05690 NONE
 CX649_05695 1170024 .. 1170075 + -17.8  -5.66684   TTCCATAAAATTTAT TAACAATGCACAATAAGCTCTT AAGGGAAG AAGAGTTTGTTGTGCATTGTTA TTTTTTTATAAATTG 100 33
 CX649_05700 1171999 .. 1172055 + -10.4  -4.09739   TTTTATTTTGCATTT TGTTTAAGGGGCTGTCTAATAAGTCGT TTTT ACGGCTTATT-GACGCCCCCTTTAATG TTTTAGAAACGTTGA 100 62
 CX649_05720 NONE
 CX649_05725 NONE
 CX649_05730 1178484 .. 1178517 +   -12  -5.75538   ACGAGGTTTTCAAAA     CCCCTTTTTC-ACAA AGCTA TTGTTGAAAAAGGGG     TTTTTGTTTTTTAGC 100 95
 CX649_05740 1179939 .. 1179950 +    -3  -2.64155   AACTAGGGGTGGAAA                CAAT GCGA ATTG                 TCGGTTTGGCAAGCG  43 39
 CX649_05745 1181402 .. 1181422 +  -2.5  -4.05229   ATGCAATTATTTGGA           GGC-GGCG CTTAAT CGTCTGCC            TTTACTATTTACTTT  53 14
 CX649_05750 NONE
 CX649_05755 NONE
        raiA 1182969 .. 1182990 +    -8  -5.53288   ATTATATATAAAAAA           GTGCAGCC TACCTT GGCTGTAC            TTTTTTTACCTTCAA  93 46
 CX649_05765 1185664 .. 1185697 +  -7.3  -2.95904   CGATTTTAAATAGAA     TGGGTGTGGCGAGAT GTCA GTCTCGCCTGTCCCA      TAAATTTTTTAATTA  62 41
        prfB 1187078 .. 1187116 +  -9.7   -5.8096   TTTAAAACATTAAAG  GGGCGTCT-ATAAGGCGT AAAA ACGACTTATTAGACACCC   TTTTTCTTTTTTATC 100 216
 CX649_05775 1187588 .. 1187611 +  -8.9  -5.34555   AAAGTAACATAAGAA          GCGAGGG-GA CATGA TCACCCTCGC          TTTTTTATGCTATAG  95 34
        ftsE NONE
 CX649_05785 NONE
 CX649_05790 1190830 .. 1190881 + -17.8  -5.66684   TTCCATAAAATTTAT TAACAATGCACAATAAGCTCTT AAGGGAAG AAGAGTTTGTTGTGCATTGTTA TTTTTTTATAAATTG 100 33
 CX649_05795 1192805 .. 1192861 + -10.4  -4.09739   TTTTATTTTGCATTT TGTTTAAGGGGCTGTCTAATAAGTCGT TTTT ACGGCTTATT-GACGCCCCCTTTAATG TTTTAGAAACGTTGA 100 62
 CX649_05815 NONE
 CX649_05820 NONE
 CX649_05825 1199207 .. 1199240 +   -12  -5.75538   ACGAGGTTTTCAAAA     CCCCTTTTTC-ACAA AGCTA TTGTTGAAAAAGGGG     TTTTTGTTTTTTAGC 100 95
 CX649_05835 1200662 .. 1200673 +    -3  -2.64155   AACTAGGGGTGGAAA                CAAT GCGA ATTG                 TCGGTTTGGCAAGCG  43 39
 CX649_05840 1202125 .. 1202145 +  -2.5  -4.05229   ATGCAATTATTTGGA           GGC-GGCG CTTAAT CGTCTGCC            TTTACTATTTACTTT  53 14
 CX649_05845 NONE
 CX649_05850 NONE
        raiA 1203692 .. 1203713 +    -8  -5.53288   ATTATATATAAAAAA           GTGCAGCC TACCTT GGCTGTAC            TTTTTTTACCTTCAA  93 46
 CX649_05860 1206387 .. 1206420 +  -7.3  -2.95904   CGATTTTAAATAGAA     TGGGTGTGGCGAGAT GTCA GTCTCGCCTGTCCCA      TAAATTTTTTAATTA  62 41
        prfB 1207801 .. 1207839 +  -9.7   -5.8096   TTTAAAACATTAAAG  GGGCGTCT-ATAAGGCGT AAAA ACGACTTATTAGACACCC   TTTTTCTTTTTTATC 100 216
 CX649_05870 1208311 .. 1208334 +  -8.9  -5.34555   AAAGTAACATAAGAA          GCGAGGG-GA CATGA TCACCCTCGC          TTTTTTATGCTATAG  95 34
        ftsE NONE
 CX649_05880 NONE
 CX649_05885 1211553 .. 1211604 + -17.8  -5.66684   TTCCATAAAATTTAT TAACAATGCACAATAAGCTCTT AAGGGAAG AAGAGTTTGTTGTGCATTGTTA TTTTTTTATAAATTG 100 33
 CX649_05890 1213528 .. 1213584 + -10.4  -4.09739   TTTTATTTTGCATTT TGTTTAAGGGGCTGTCTAATAAGTCGT TTTT ACGGCTTATT-GACGCCCCCTTTAATG TTTTAGAAACGTTGA 100 62
 CX649_05910 NONE
 CX649_05915 NONE
 CX649_05920 1219964 .. 1219997 +   -12  -5.75538   ACGAGGTTTTCAAAA     CCCCTTTTTC-ACAA AGCTA TTGTTGAAAAAGGGG     TTTTTGTTTTTTAGC 100 95
 CX649_05930 1221419 .. 1221430 +    -3  -2.64155   AACTAGGGGTGGAAA                CAAT GCGA ATTG                 TCGGTTTGGCAAGCG  43 39
 CX649_05935 1222882 .. 1222902 +  -2.5  -4.05229   ATGCAATTATTTGGA           GGC-GGCG CTTAAT CGTCTGCC            TTTACTATTTACTTT  53 14
 CX649_05940 NONE
 CX649_05945 NONE
        raiA 1224449 .. 1224470 +    -8  -5.53288   ATTATATATAAAAAA           GTGCAGCC TACCTT GGCTGTAC            TTTTTTTACCTTCAA  93 46
 CX649_05955 1227144 .. 1227177 +  -7.3  -2.95904   CGATTTTAAATAGAA     TGGGTGTGGCGAGAT GTCA GTCTCGCCTGTCCCA      TAAATTTTTTAATTA  62 41
        prfB 1228558 .. 1228596 +  -9.7   -5.8096   TTTAAAACATTAAAG  GGGCGTCT-ATAAGGCGT AAAA ACGACTTATTAGACACCC   TTTTTCTTTTTTATC 100 216
 CX649_05965 1229068 .. 1229091 +  -8.9  -5.34555   AAAGTAACATAAGAA          GCGAGGG-GA CATGA TCACCCTCGC          TTTTTTATGCTATAG  95 34
        ftsE NONE
 CX649_05975 NONE
 CX649_05980 1232310 .. 1232361 + -17.8  -5.66684   TTCCATAAAATTTAT TAACAATGCACAATAAGCTCTT AAGGGAAG AAGAGTTTGTTGTGCATTGTTA TTTTTTTATAAATTG 100 33
 CX649_05985 1234285 .. 1234341 + -10.4  -4.09739   TTTTATTTTGCATTT TGTTTAAGGGGCTGTCTAATAAGTCGT TTTT ACGGCTTATT-GACGCCCCCTTTAATG TTTTAGAAACGTTGA 100 62
 CX649_06000 1236132 .. 1236148 +  -6.7  -3.34534   CGTTTTAAAGACTAA              TGAAAAA GAT TTTTTCA              TTCATATCTCCTATC  62 26
 CX649_06005 1237163 .. 1237176 +  -3.9   -3.6761   TTTAAGCAATGAATG               TCTTT GATG AAAGA                TGTTTGTTGCCAAAA  52 76
 CX649_06010 NONE
 CX649_06015 NONE
 CX649_06020 NONE
 CX649_06025 NONE
 CX649_06030 1241127 .. 1241160 + -12.5   -4.8622   AATGGAAAAAAGAAA     GCGGTAAGCGTCA TCAATTTT TGTCGCTTACCGC      TTTTTGATTAAGCAG 100 19
 CX649_06035 NONE
 CX649_06040 NONE
        hisD NONE
 CX649_06050 NONE
        hisH NONE
        hisA NONE
 CX649_06065 NONE
 CX649_06070 1247738 .. 1247750 +  -3.4  -3.91412   AATCGCGAGTAAAAA                TAGG TTTTT CCTA                TTTATAAGATATGGT  55 39
 CX649_06075 NONE
        trxB 1250392 .. 1250419 +  -8.4   -5.7946   TATAATATATACTTT        TGAGCATGGGCA ACCC TTCCCATGCTCC         TTTTTTTGTTGCACC 100 134
 CX649_06085 NONE
 CX649_06090 NONE
 CX649_06095 NONE
        whiA NONE
 CX649_06105 1254388 .. 1254439 +  -8.8  -4.91852   CAATGGATGGATATT GCCTCTCTTGTGGGAGAAAGCAGG AAACAA CC-GCTGTCAGCCACAAGAG-GGC TTTATTTTTGCTAAA  95 75
 CX649_06115 1256103 .. 1256127 + -11.6  -5.18726   CAAAGAGACCGCGTG          CCTCCAAAAT GAAAA ATTTTGGAGG          TTTTTATTATGCGAA 100 146
 CX649_06120 NONE
 CX649_06125 1257617 .. 1257637 +  -8.9  -5.93252   ATAACTCCTCAATAA            GGCGGCGCA TTT TGCGCCATC            TTTTTTATTTTTGCG 100 26
 CX649_06130 1258732 .. 1258745 +  -3.9  -2.99568   TTCGAAAATTGCTTG               GATTT TAAA AAATC                GTTCTGTTTTAGTAT  47 18
 CX649_06135 1260389 .. 1260406 +  -2.7  -2.80077   CACATAGCGTTTAAT             CGGATGA CAAT TTATTCG              TGCATTTTCTAGACA  42 27
 CX649_06150 1264894 .. 1264912 +  -6.6  -2.71731   TAACTTGTCCGTGCA             GGGAGCCG TTA TGACTCCC             TGCTTGAAAAATAGC  57 41
 CX649_06155 1267168 .. 1267191 + -11.8   -5.1101   AATCATCATTCAAAA          GGCTATCGAG TGCA TTCGATAGCC           TTTTTTGCATAGTGA 100 158
 CX649_06160 1268599 .. 1268610 +  -2.2  -2.83255   AAAATTCAGTTTTGC                GGTA AATG TGCC                 TATCGTGAATATTGT  41 411
 CX649_06170 NONE
        cas2 NONE
        cas6 1270699 .. 1270742 +  -5.9  -3.75707   AACAGGGAAATATTT GTCGTCGACCCCCAATCGT GCAAAA ATCCCTGGGGATCGACGAC TCTTTTAAATCTTTA  65 42
 CX649_06185 1273468 .. 1273503 +  -4.8  -4.67011   CAATAGAAAAAGGAA    GCAGCCTAAACC TTCTATATTCGT GTTTTAGGCTGC     TTTTTAAATAAAATT  72 144
 CX649_06190 1274136 .. 1274146 +  -2.6  -4.13748   TTTGTCAAGCCCAAT                 TTTA TGT TAAA                 TTTCATCTTTTTGGA  55 52
 CX649_06200 NONE
        ssrA 1276715 .. 1276748 + -12.7  -3.74626   AAATTAACAATGAAA     TAAAAGAAATCGGCA AACA TGCTGGTTTCTTTTA      TTTACATGCTTTGCT  95 347
 CX649_06220 1278614 .. 1278627 +  -8.1  -6.04378   AAACAATAGTTCAGG               GCGGT TAAA ACCGC                TTTTTTTTATGATTT 100 32
        fumC 1280242 .. 1280299 +  -9.6  -3.73995   ACTGTCTATGAACTG CACCCCTTAAAGTAGATGTTGA-AAAAT CCCT ATTTGGTCAACA-CTGCTTTAAGAGGTG ATTTTTTATGGCAAG  83 137
 CX649_06230 1281902 .. 1281948 +    -9  -4.33755   CAAAAGTGCATAAAA GCTGAA-CAACCTTACTCCAA TGAATT TTGAAGTAAGGTTGCTTTGGC TTTATTCATATTGCT  89 434
 CX649_06240 NONE
 CX649_06245 NONE
 CX649_06250 NONE
 CX649_06255 NONE
 CX649_06260 1287559 .. 1287569 +  -6.8  -4.82855   ATGACATTAAATAAC                 TGCC GCT GGCA                 TTTTTGCGTTTCGTC  81 520
 CX649_06275 NONE
 CX649_06280 1291930 .. 1291944 +  -2.8  -2.82521   ATAAAGGGCGGAAGC               TTCATC ATG GAAGAA               ATTCCTTTTGATCGG  42 153
 CX649_06285 1293688 .. 1293728 +   -12  -3.03884   TAACTGCGGGACTTA GGGGTGTCTAATAAGTCGT TTTT ACGGCTAATT-GACGCCCC  CTTTAATGTTTTAGA  85 38
 CX649_06290 1294267 .. 1294282 +  -4.8    -3.885   TAAATTTAGAAAAGA              TTCTAT TTAA ATAGAA               TTCTTATATAAAAAT  59 38
        gcvH 1294704 .. 1294738 + -12.9   -5.0065   AAAAGAAGACTAATA     TGAAACCCCCGTCTC CCTTT GAGAAGGGGGTTTCC     TTTTCTTTATAAATG 100 28
 CX649_06300 NONE
 CX649_06305 1295641 .. 1295651 +    -4   -5.4505   TTTGCTGGGGGGTTG                 TCAA TGT TTGA                 TTTTTTATTAGAAAA  79 137
 CX649_06310 1296150 .. 1296175 + -14.1   -4.4261   ATTGAATGTAATCGT         GCCTTTCTGCA GCTG TGCAGGAAGGC          TTTTAGTATTAAACC 100 217
 CX649_06315 NONE
 CX649_06320 NONE
 CX649_06325 1298783 .. 1298810 + -10.6  -5.47218   TGAATAATCAATTGG        GAAGCTGTGCAT ATTT ACGCGCAGCTTC         TTTTTTTGGATCAAG 100 34
 CX649_06330 1299260 .. 1299279 +    -8  -3.73042   AATCCTTTCTCATTG            GCTTAAAA TGGG TTTTAAGC             TGTTTTAATCAGCGA  75 256
 CX649_06335 1299583 .. 1299600 +    -7  -5.74684   GCTAAACTAAATCAG             CCAGTC GGCAAA GACTGG              TTTTTCTTTTTATTG  93 31
        sufC NONE
        sufD NONE
 CX649_06350 NONE
 CX649_06355 NONE
        sufB 1305003 .. 1305058 + -11.5  -4.09739   GGATAATCCTTATAA TACTAA-GGGGGTGTCTAATAAGTCGT TTTT ACGGCTTATT-GACGCCCCCATTAATG TTTTAGAAAAGTTGA 100 35
 CX649_06375 NONE
 CX649_06380 NONE
 CX649_06385 1309737 .. 1309772 + -14.1   -6.4275   CATAAAATTGATTCA    TAAAGAGCCCGTTCC TGAGTT GGTGCGGGCTCTTTA     TTTTTTTTCTTTTTG 100 246
        lipA 1311847 .. 1311875 + -11.7  -4.26076   AAAGCTTAAAGCCAC        AGAGCCGTCAAGA ATT TCTTGACGGCCCG        TTTTAATAAAAATAG 100 32
 CX649_06405 1312990 .. 1313022 + -20.8  -4.49556   TCTGGGTGTGAAAAA      GTAATCAGGACGGC ATACA GCCGTCCTGATTAC      TTTATTTCATACGGG 100 59
 CX649_06420 1314674 .. 1314702 +    -4  -3.55563   AGGAGTGAAAAAAAA        TTGAAGAAATAT AAAGG ATATTTCATCGA        TTTAGACGGTACCAT  52 53
 CX649_06425 1315718 .. 1315733 +  -7.6  -2.52543   ATTCCATATAATCCT              TCATCC GATT GGATGA               TCGATTGAAGAGGCT  59 302
        yutH 1317213 .. 1317231 +  -4.5  -3.34398   ATCATAAAAAAGAAA             GCAGCTA AAATC TTGCTGC             TGTTTCGAACAAAGC  53 67
 CX649_06440 NONE
 CX649_06445 NONE
 CX649_06450 NONE
 CX649_06455 1321696 .. 1321718 + -13.5  -3.92178   CTTGATATAAAGAAA           CAAACCGGC TTTTC GCCGGTTTG           TTTCATTAAAATACT 100 31
 CX649_06465 1322612 .. 1322635 +    -8   -4.4891   CCGGAAAAAGAGAAG          CCGGACGTAC AAAT GAACGCCCGG           TTTTCTCATGCTCCA  82 205
 CX649_06480 1324394 .. 1324428 +  -4.4  -4.12532   TGATGATATAAAAAA     TAAAAGCCCCTC TTATATTTCCC GAGGAGCTTTTA     TTTATATATGAAAAC  62 248
 CX649_06485 NONE
 CX649_06490 1325895 .. 1325942 +  -5.9  -4.82901   ACTCACAATAAAATA TATCCTAATAAAGTGGAAT CAAAAAAAAA AGTCTGCTTTATTAGGATA TTTTTATGGGAAAAA  77 99
 CX649_06500 1329100 .. 1329125 + -10.5  -4.16681   TTAAGCTGAAGAAAA         GAGCAAAGGCT TAAG GGCTTTTGCTC          TTTTAAAATAATGTT 100 37
 CX649_06505 1330692 .. 1330706 +  -7.2  -2.52896   ATTCACACAAGGAGG               TTCATG TCT CATGAA               TAGATTAGCACATCA  60 485
 CX649_06515 1331882 .. 1331894 +  -3.3  -4.34859   AGCTCCATGTGGCAT                AAGGG GTA CCCTG                TTTGTCTCTTTTGGT  60 24
 CX649_06525 NONE
 CX649_06530 1333962 .. 1333979 +  -2.7  -3.26718   AAGGAGACTTTTAGA             GATGGAA AACA TTCAATC              TGTTGATCATTTTTG  45 115
 CX649_06535 NONE
 CX649_06540 1335163 .. 1335174 +  -4.4  -2.54504   AAAGAAGGAATCGGC                GATG TACT CATC                 ATCTCTTTAAAAGAT  47 56
 CX649_06555 NONE
 CX649_06560 1340620 .. 1340639 + -12.2  -6.04378   CTTCACATAGATTGA            GCCAATCC TCTG GGATTGGC             TTTTTTTTATCATTT 100 62
 CX649_06570 1341690 .. 1341714 +  -9.3   -5.1615   AAGCCTTATCTTCCG          GCACGCAAGCT GTC AATTTGCGTGC          TTTTTTCCGTGTTAG 100 39
 CX649_06580 NONE
        lepB 1343626 .. 1343646 +  -9.8  -4.36595   AACACGAAATCAAAA            TGGGACAA GAAAA TTGTCCCA            TTTTCCGTTTGGATG 100 126
        addB NONE
        addA NONE
 CX649_06600 NONE
 CX649_06605 1355612 .. 1355666 + -11.1  -4.14472   ATCTTAACCGCTCAA CAT-GACGGGGCTGTCTAATAAGTCG ATTTTC CGGCTTAT-AGAC-GCCCCGTTAATG TTTTAGAAATGTTGA 100 114
 CX649_06640 NONE
 CX649_06645 1359484 .. 1359499 +    -4  -4.19311   TATGTCTTTTCAATA              TTCC-CG GAT CGAGGAA              GTTTTTTTATTTATA  59 94
 CX649_06650 NONE
        cysT NONE
        cysW NONE
 CX649_06665 NONE
 CX649_06670 1364610 .. 1364646 +  -8.1  -4.64657   GACCAGACAACTGGA   GGCTCC-TACTTAGCA GAAGCA TGCTAAGAAAGGGGCC    TTTTTGCGCATTTAA  84 60
        ssuD NONE
 CX649_06680 NONE
        ssuB NONE
 CX649_06690 1368575 .. 1368602 +   -10  -4.82901   ATAGTTGTCCTTTTA        CAAATGGAGG TGTTTATC CCTCCATTTG         TTTTTGTGGAGAACA 100 141
 CX649_06695 NONE
 CX649_06700 NONE
 CX649_06705 1371353 .. 1371368 +    -4  -4.68994   AATCATTTTATTTAT              CATAGT AATT GCTATG               TTTTTGGATGATCAT  67 110
 CX649_06710 1371895 .. 1371939 + -10.8  -3.95352   TTTCTAAAACATTAA TGGGGGCGTC-AATAAGCCGT AAAA ACGACTTATTAGACACCCCCC TATTATTTTTCTTTC  93 147
        asnB 1375183 .. 1375225 + -14.3   -2.9268   TTCTAACACATTAAT GGGGGCGTC-AATAAGCCGT AAAA ACGACTTATTAGACACCCCC CTTGCTTTTTATAAT  93 123
 CX649_06725 1377623 .. 1377636 +  -2.3  -5.32944   AACAGATTAGGAAAG               CAAGC TTTT GCTCG                TTTTTTCGTTGTGAC  70 331
 CX649_06730 1378401 .. 1378422 +  -6.6  -3.68359   ACCTCTTCGTGGAAA           TAGCCGAG CGACAA TTCGGCTA            TTCTAATTTTAAACA  64 225
 CX649_06740 1385866 .. 1385907 + -11.1  -4.09285   ATAAAATAGGCAAAC GGGGCTGTCTAATAAGTCG ATTTTC CGGCTTAT-AGAC-GCCCC TTTAATGTTTTAGTA 100 37
 CX649_06745 NONE
 CX649_06750 1388913 .. 1388930 +  -7.1  -2.78746   CAGCTTTTTTGTGAA             GATGTTA TTTT TAACATC              GTTATGTAATTTGCT  62 244
 CX649_06755 1389570 .. 1389594 + -10.8     -3.37   TTTACAAATAGAAAA          GCCCCAAAGT ATTGG ATTTTGGGGC          CTTTTTGCAGATTAA  87 311
 CX649_06765 1391286 .. 1391303 + -10.5  -5.26875   AAAGAATGATAGAAA             CCGGGGC GCCT GCCTCGG              TTTTTTCATTCGAGC 100 186
 CX649_06780 1394718 .. 1394728 +    -4  -4.50841   TGGTCTTAACGTGAT                 TCAT TTT ATGA                 TTTTAGTATTATTCT  65 405
 CX649_06830 1405330 .. 1405346 +  -2.3   -3.1544   TTGAGGTAGAAAATT              TTTAATG TGA CATTAAC              TTCGATATAATGTAA  44 32
 CX649_06835 1405710 .. 1405730 +  -8.3  -5.93809   ATAAAAACTTATGCA            GACTGGC GGAAAAG GCCAGTC            TTTTTTTTATGCAAA 100 37
 CX649_06840 NONE
 CX649_06845 NONE
        argB NONE
 CX649_06855 1410221 .. 1410242 +  -5.2  -4.65747   AAAAAAGAAAAAATC           TTCTCTTC CTAAAA GAGGAGAA            TTTTCTTGCAAATTG  74 14
 CX649_06860 NONE
 CX649_06865 NONE
        argF 1415362 .. 1415378 +    -8  -5.79595   TCTTTCGTTGATAAA              GCAGGA TGATC TCCTGC              TTTTTTCTTTTGAAA 100 46
 CX649_06875 1415898 .. 1415918 + -11.2  -4.06001   TTCGAACAACGCTAA            GCCATTCG GAAAA CGAATGGC            TTTACTTGATTTATA  93 44
        clpB 1418645 .. 1418670 +  -8.3  -5.93809   TATAAATGGATATTA         AAACCCTTCTC AATC GAGGAGGGTTC          TTTTTTTTGTGCGGA 100 42
 CX649_06890 1420272 .. 1420288 +  -2.1  -5.27335   GAAAATGCTCAATAA              GTGAGCA GGC TGCCCCC              TTTTTGTTTGAAAAG  70 62
 CX649_06895 1421415 .. 1421434 +    -5  -3.61715   TGAACTTAGCTGAGA            TCGATATG TAAT CATTTCGA             TTATTGAGAAACCTC  57 217
 CX649_06900 1422482 .. 1422503 +    -8  -3.83042   AAAATAAAAATTTTG           GGGGATGG TTGAAT TCATCCCC            TTAATTTTTAAATAG  75 59
 CX649_06910 NONE
        fabF 1425271 .. 1425298 + -12.8  -5.18726   AAGGATTATATGAAA        CCGTTATTGCCT AAAC AGGCAGTAGCGG         TTTTTCTTGTGCGCC 100 60
 CX649_06920 1426729 .. 1426772 + -21.4  -3.09273   ATTTGTCATGCGAAA ATTTATTTTGGAAGGAAGGG GTAC CCCTTCCTTCCAAAATAAAA TCTATATTAACCAAA 100 98
 CX649_06935 NONE
 CX649_06940 1431360 .. 1431377 +  -8.5  -5.45802   TGTTTTTAAATCGGT             TTTGGCT GAAA AGCCAAA              TTTTTCTTTTGCCAA  95 91
         gmd NONE
 CX649_06965 NONE
 CX649_06970 NONE
 CX649_06975 NONE
 CX649_06980 NONE
 CX649_06985 NONE
 CX649_06990 NONE
 CX649_06995 1443199 .. 1443211 +  -3.5  -4.24338   TTATACTCGTTTATT                TTTTT CTT AAAAA                TTTTCAAATGTTTTT  59 101
        rfbC NONE
        rfbB NONE
        rfbD 1446865 .. 1446881 +  -2.4  -2.60988   TTTCCAACCTAAATG              TTTTTT CATTA AAAAAA              TCGATTCGTTAAATT  40 378
 CX649_07045 1451398 .. 1451408 +    -4  -5.00616   CTTCATAGAATGGAA                 TAAG GTT CTTA                 TTTTTTGGAAGAAAG  70 64
 CX649_07050 1451858 .. 1451872 +  -2.1  -2.71744   TGTGTCCACTCCAAA               TGAGG AACTG CTTCA               TACTGTATAGTGATG  40 108
 CX649_07055 1452097 .. 1452127 +  -9.1  -4.77036   GTGCTGGTCACGGAT      GGAT-GTCCGCCTT TTAG AAGGCGGACTATAC       TTTTTCCTCATCACG 100 71
 CX649_07060 1452480 .. 1452507 + -15.6  -4.37658   ATAAGAAAAAATAGC        GCGTCAGCGGGA GTAC TCCCGCTGACGG         TTTTATAGCAGCATT 100 27
 CX649_07090 NONE
 CX649_07095 NONE
 CX649_07100 1459153 .. 1459168 +  -7.6  -2.98356   TTTTTAACATTGTTT              GCCATT ACTT AATGGC               TATATGAATTTCAAT  66 245
 CX649_07105 NONE
 CX649_07110 1462715 .. 1462748 +  -6.8  -6.10295   CTTACCTTAATAGAA     GACAGGGAGATGTCG AATAC CGACAATTCC-TGTC     TTTTTTTTATGTTGA 100 48
 CX649_07115 1463876 .. 1463902 + -10.2  -3.10102   AGCCATAACGTATCA         AGATAGGCCGTT TTA AACGGTCTATCG         ATTTCGTTTATGTAA  80 33
 CX649_07120 NONE
 CX649_07125 1466821 .. 1466839 +  -6.1  -4.14739   TAAAAAAAGAGCATG             CAGAAAA CTTAT TTTTCTG             TTTTAGACTGCATGA  69 424
 CX649_07135 1467516 .. 1467571 +  -7.8  -2.96274   TTACTAAACCACCAA GTTGGT-TGCATGGGGGGTGTTAAG TGCTTTC CTTGACAAGTCCTATGCATACCAAC TATCATTGTCAAAGC  66 77
        moaA 1473072 .. 1473102 +    -7  -6.17033   ATATAGGAGGATAAA       CAATCGGCGTTT GGTGATG AAATGCTGATTG       TTTTTTATTTTTTTT 100 27
 CX649_07175 NONE
 CX649_07180 1475228 .. 1475240 +  -3.3  -2.56095   AAAAATCTCAGTTAA                GCGGT ATT GCTGC                TGACTTAACTCTGAA  42 184
 CX649_07185 NONE
 CX649_07190 1478930 .. 1478970 + -11.5  -3.31799   ACCCCTAAAATGGAA  CTTTTTCAGATAGTG CCAGTTAACAA CACTATCTGAAAAAG  TTATCAAAGATTCTA  87 496
 CX649_07195 NONE
 CX649_07200 NONE
 CX649_07205 NONE
 CX649_07210 1482815 .. 1482828 +  -5.2  -3.76492   GGAAACTTCGGGAAA               CGGC TAGCTC GCCG                TTTCCTAAAGTTAAA  61 44
 CX649_07215 1484338 .. 1484370 +    -5  -3.55784   ACGATTGCTTTGAGA      CCTCCTTCTT AAAAATGTTCAAA AAGAAGGAGG      TTAATTGATTTTATC  57 138
 CX649_07225 1485638 .. 1485648 +  -2.6  -4.64423   AAAAACGAAAGAGGG                 TTTT TCC AAAA                 TTTCTATTTTTATTG  60 447
 CX649_07230 1486840 .. 1486875 +  -3.8  -2.92144   CATTCAAAAAACAGC    GGCTGTCTCATCGGTT TAAC GGCCATTGCGGCAGCC     TCGTTATGCTTTCAC  46 380
 CX649_07240 1488365 .. 1488378 +  -5.3  -4.08692   TTAAAATAAAAGCAT               CTTGT ATAT ACAAG                TTTTGAAAGCGGTTA  66 190
 CX649_07245 NONE
 CX649_07250 1490390 .. 1490417 + -10.7  -3.24422   ATAATCAAAGATTCA        TACCATTGGTG AATGAC CGCCAATGGTA         TCGTTTTTCCCGATA  86 70
        treC 1492133 .. 1492148 +  -4.8  -2.64794   TGAAGCGATTGTGTA              TCATTT AACA AAATGA               TACTATACAATTCGG  50 10
        treR 1492980 .. 1493014 +   -13  -4.10934   CTTGGTTGACAAGCT     GACCTTGAAAGAGTGT CGA ACACTCATTCAAGGTG     TTTATAATTACTTAT 100 87
 CX649_07270 1494824 .. 1494837 +  -5.3   -3.7795   GACTTATAATCAGAC               TGGAA CCGG TTCCA                TTTCATAAAGTTTGG  61 32
 CX649_07275 1496371 .. 1496400 + -10.1  -3.28122   ATAAATTAAATATTG       GGGTCTGATC-CTT AAA AAGAGGTCAGGCCC       TGTGTTTACATCGTG  79 40
 CX649_07280 NONE
 CX649_07285 1498920 .. 1498955 + -14.2  -5.52384   AAAACATATTAAAAT    TAGTAGCACAGACC ACAGTCAA GGTCTGTGCTGCTA     TTTTTTTAGTAGAAG 100 40
 CX649_07300 1501909 .. 1501922 +  -3.8  -4.35958   CAGAATTGAAGTAGT               CGGA TCGGTT TCCG                TTATTTATTTAGTAA  62 27
 CX649_07305 1502816 .. 1502826 +  -2.6  -3.58533   ACAGATATGAGGTGG                 TTTT TTG AAAA                 TTTCCAGGGTTATGC  48 114
 CX649_07310 NONE
 CX649_07315 NONE
 CX649_07320 NONE
        allB NONE
 CX649_07330 1508751 .. 1508788 + -10.7  -5.60993   ACCATTTCACTACAT   GTGGATAACTAAAGGTG ATTA TACCAATAGTTATCCAC    TTTTTTTATCGAAAA 100 280
 CX649_07350 NONE
 CX649_07355 NONE
 CX649_07360 NONE
 CX649_07365 1515369 .. 1515389 +  -3.3  -3.52481   AAATAGAGAAAAAAA            GAAGAAAAG GAT TTTTTCTGC            TTCTGTCGAATATTT  50 355
 CX649_07370 NONE
 CX649_07375 NONE
 CX649_07380 1519881 .. 1519907 +  -8.1  -5.16206   TTAAAAAATTGATGA         TTAGCACTCGA TTGAT TAGAGTGCTAA         TTTTTATCTTCATTT  90 255
 CX649_07385 1521834 .. 1521844 +  -2.4  -2.89534   ATGATTTCCTAAAAA                 AGCC GGA GGCA                 TATGATGTGATTGGT  41 29
 CX649_07390 1522123 .. 1522137 +  -4.3  -3.65542   GCGGAAGGCAGGTTT               GTTCA TAGTT TGAAC               TCTTTTGCAGCTAAG  55 13
 CX649_07395 1523131 .. 1523147 +    -8  -5.93252   GATTCAATAGCTAAA              GCAGGA TGAAC TCCTGC              TTTTTTCTTTTTGCA 100 108
 CX649_07400 1524413 .. 1524434 + -10.1  -3.38812   TAAAGCAATGATAAA           GCCCCCATT GCTT AAAGGGGGC            TATTGTTGAAGAGAA  81 135
 CX649_07420 1528545 .. 1528568 +  -8.2  -5.95286   ATTTAAAAGCGGGAA          GTAGCTTTCT AGCT GGAAAGCTGC           TTTTTTATTTTTAAT 100 22
 CX649_07425 NONE
 CX649_07430 NONE
 CX649_07435 1531636 .. 1531665 +    -5  -5.47159   CGTTTGATTTTGGAA       CAAACCCGTATT CAAGAA AGAGCGGGTTTG        TTTTTGTTTGTTGGA  83 87
 CX649_07440 1532040 .. 1532081 +  -7.6  -5.44721   AATCAAAACAAATGA GGCTTGCATGAAAGTTT AATAGAACG AAACTTTC-TGTAAGCC TTTTTTTAGCGTGAT  93 7
 CX649_07445 NONE
 CX649_07450 NONE
 CX649_07455 1534809 .. 1534845 +   -16  -3.12521   TTTGACAAATTCAAT    CGGAAAACCGCCATTT ATGTA AGAAGGCGGTTTTCCG    TCTACTTTTGATGGG 100 66
 CX649_07460 1536472 .. 1536499 +    -7  -3.63922   TTAAGCATGTATCAA        GGCAGACAAC GAACAAAG GCTGTCTGCC         TGTTTTAAACGACAT  68 37
 CX649_07475 1538311 .. 1538323 +  -6.3  -3.14548   CAACAGCTTGCTCAT                TCCAA TCA TTGGA                TTGCATGATATTGTT  59 182
 CX649_07480 1539382 .. 1539398 +  -5.2  -4.62471   TTTTATATTCCAAAA              TGGTAA GTATG TTACCA              TTTTTAAAAATTGAG  71 41
 CX649_07490 1541134 .. 1541148 +  -4.4  -3.37474   CGATAAAACGAGCTT               TTTTTT GGG AAAAAA               TTATGGAATATTGTA  53 108
 CX649_07495 NONE
 CX649_07500 NONE
 CX649_07505 NONE
        glnT NONE
 CX649_07515 NONE
 CX649_07520 1548216 .. 1548247 + -12.5  -2.97205   TGTATACGCATAAAA      GAATCCTCAC-CTG ATAAA CAGTGTGAGGATTC      ATGTTTGTTTTGATG  87 97
 CX649_07530 1550713 .. 1550725 +  -3.3  -3.14881   AAAGAATTTCCCCTT                GTCGT AAC GCGGC                TTCATGGGGAGGTTC  45 48
 CX649_07535 NONE
 CX649_07540 NONE
 CX649_07545 1553534 .. 1553565 +  -8.2  -2.52263   GCCGTTATCTTTCTA      TGTTGTAATTTGAT AGAA ATCAAGTTACGGCA       ATGCTTTGTTTGCTT  66 18
 CX649_07550 1554403 .. 1554415 +  -4.9   -3.2327   TTGCCGCAATCCAAA                TAGAA GTA TTCTA                TTGGTGGTGCATTGC  54 131
 CX649_07555 NONE
 CX649_07560 1556011 .. 1556030 +  -2.2  -5.80951   GATTTATCAAAATAG            GAGTTT TCATACTC AAACTC             TTTTTTATTTTAAAT  83 63
 CX649_07570 1557773 .. 1557806 +  -7.6  -5.99154   AAAAATAAGAAATTT     GTCCATTTTAGTTT ACATAC GAGCTAAAATGGGC      TTTTTTTGTTTGCTA 100 39
 CX649_07585 1561426 .. 1561449 +  -7.5  -5.52384   ATTAACTTCAAAAAA          GACAGGACA TTCATT TGTCTTGTC           TTTTTTTAGTGCGCC  93 36
 CX649_07600 1563440 .. 1563472 + -15.1    -5.626   GTCAGCTTAACAAAA      TCAGGATCCGAAA AGTCTTC TTTCGGATCCTGA      TTTTTTTCTCCCATG 100 31
 CX649_07625 1567094 .. 1567111 + -10.5   -4.5442   GCAAAATAAAAGAAA             GCCGCCG CAAA TGGCGGC              TTTTGTCATTCCAAA 100 32
 CX649_07630 1567598 .. 1567618 +  -9.7  -4.58297   CATTTTAATAAAATA            GAGAGCCGG AAG TTGGCTCTC            TTTGTATTTTTGATA 100 33
 CX649_07640 NONE
        btuC NONE
 CX649_07650 1573068 .. 1573081 +  -2.4  -2.74012   AAAGAAGGGGAAGGA               CATG ACAGAA CATG                TAATTGCGATCATGC  40 21
        cobD NONE
 CX649_07660 NONE
 CX649_07665 NONE
 CX649_07670 NONE
        cobS NONE
 CX649_07680 NONE
 CX649_07685 NONE
 CX649_07690 NONE
 CX649_07695 1580246 .. 1580258 +  -6.3  -3.15027   ATTTTGCCAAAAGGA                GAAAG TGA CTTTC                ATTTTGCTAACCAAT  61 84
 CX649_07700 1580926 .. 1580961 +  -4.8  -3.66666   TAAGATTACAGGAGG    TGTATTCCTTACTGTT TAGA AGCGGTAAGGGAGATA     TTTGGAAATTTTCAA  57 75
 CX649_07705 1582518 .. 1582543 + -12.6  -3.13906   CTAACTAACGGTAAA         GGCTGTCGGG AAACAG TCCGACAGCC          TGATTTTCACTTCAC  87 285
 CX649_07725 1589852 .. 1589890 + -11.2   -5.7946   TTAATCAAAATTGTC  CACGCCTGCAGACAAAA TGTATT TTCTGTCTGCAGGC-TG   TTTTTTTGTTGGAAC 100 42
 CX649_07730 1592033 .. 1592056 + -11.8  -4.99043   TGAATGGACTGTAAA          GCGTGCAAGCA TCT TGCT-GCACGC          TTTTATTTGTGCGCC 100 76
 CX649_07740 NONE
        tenA NONE
        tenA NONE
 CX649_07755 NONE
 CX649_07760 NONE
 CX649_07765 1599769 .. 1599791 +   -12  -4.52949   TTTGATTAAAAAGAG           CCTCTAGGGG AAA CACCTAGAGG           TATTTTTTTTGAAAA 100 226
        urtA NONE
        urtB NONE
        urtC NONE
        urtD NONE
        urtE 1604651 .. 1604665 +  -7.2  -3.91882   CATAACACTTGGTGT               TTCACA TAG TGTGAA               TTATATTTGTAATAA  73 102
 CX649_07795 NONE
 CX649_07800 NONE
        ureC NONE
 CX649_07810 1607572 .. 1607583 +    -3  -3.38088   TCGATATGTCGGACA                TCAT CACC ATGA                 TTGATTGGCTGCCTT  48 10
 CX649_07815 1608341 .. 1608355 +  -6.4  -4.07687   GGCTGGAAAGCGTAA               GAAGCG ATC TGCTTC               TTTTCAAAAAAAACT  69 103
        ureG 1609020 .. 1609033 +  -2.3  -3.31144   GGATTAAACGAAATG               CGCTG CTGG CAGGG                TTGTAGAAATGGAAG  44 6
 CX649_07825 NONE
 CX649_07830 1610530 .. 1610559 +  -9.4  -5.25893   ATTAATTGCTTAAAA       CCTCGTTTGGAT CACTCC ATCCAAATGGGG        TTTTTTCATGTGTAT 100 45
 CX649_07835 1611794 .. 1611816 +  -4.9  -3.54424   CCTCCTCCACCGTAT           GGCTCTTTT AGCCG AAAAGATCC           TTTCAAACGATCAAA  56 357
 CX649_07845 1613492 .. 1613534 + -14.3  -4.70879   TTCTAACACATTAAT GGGGGCGTC-AATAAGCCGT AAAA ACGACTTATTAGACACCCCC TTTTTCGGATTTCAG 100 113
 CX649_07855 1615504 .. 1615546 + -15.1  -5.42198   ACGGGATGGAAACAA GCCGTAGGAAAGAAAAAAC TTATT GTTTTTCTTTTCCTGCGGC TTTTCTTTTTTCACA 100 101
 CX649_07860 NONE
 CX649_07865 NONE
 CX649_07870 NONE
 CX649_07875 NONE
 CX649_07880 NONE
 CX649_07885 NONE
 CX649_07890 1623549 .. 1623575 +  -4.4   -3.2964   AATAGACGAACCGAT         GGTTATGTACCG ACG CGGTATCTAAAC         TTGTCAAGCCCCTTT  51 104
 CX649_07895 NONE
 CX649_07900 NONE
        pucD NONE
 CX649_07910 NONE
 CX649_07935 1634103 .. 1634147 +  -3.1  -5.05116   TAAAAGAACACAAAA GGCGTTTTCTCAGGCTG AAAAGTTGATGGA CAGCC-GA-AAAACGCC TTTTATTATTTCTGC  71 38
 CX649_07950 1637858 .. 1637868 +  -3.2   -3.5936   TTGTAAGGAAGTGAT                 TCCG AAT TGGA                 TTTGGAAAGTTTAAA  50 43
 CX649_07955 1638769 .. 1638780 +    -3  -3.14211   TTCAGGTTAAAATAA                TTGT TTTC ACAA                 TTAATAAAAAAGGAT  45 31
 CX649_07960 NONE
 CX649_07965 NONE
 CX649_07970 1640819 .. 1640866 + -14.5  -5.95539   GCTTACATGGTAATT GAATGAGAAGCAGCTGTCTAGA ATGCC TCAAGACAGTT-CTTCTCATTC TTTTTTTGTTTGCCG 100 152
 CX649_07985 1644538 .. 1644558 +  -6.9  -5.10497   TTTATGAACAAAAAA            TCCCGAA AGAACTA TTCGGGA            TTTTTTGCATGGATT  88 112
        pdhA NONE
 CX649_08005 1648043 .. 1648065 +    -2  -4.17762   AATTTCTAATTGGCT           AAAAAGAGGA GCA TCATCTTTTC           TTCTTTTCGGCCATC  54 32
 CX649_08010 NONE
        lpdA 1650840 .. 1650882 +   -18  -4.51363   GTAATGCAGCCCAAA GGGGCAGTCTAATAAGTCG TTTTTT CGGCTTATT-GACTGCCCC TTTTAATGTTTAATA 100 37
 CX649_08025 1652162 .. 1652178 +  -8.7  -6.10295   GTTTAAGATAAATGG              GCTGTCT TTA AGGCAGC              TTTTTTTTATGTTAA 100 69
 CX649_08030 1652834 .. 1652844 +  -2.4  -2.91057   CCCACGAAGTAGGAA                 GGCC GTC GTCC                 ATATTTTAGTTATGT  41 65
 CX649_08045 1656612 .. 1656639 + -13.6  -4.58663   TTTCAAAAGAAATAA        TGGTCAGCGATGC AGC GCATC-CTGACCA        TTTTTAAACAGTGCT 100 45
 CX649_08055 1658247 .. 1658258 +  -5.8  -3.38272   TATAAAGCTGCAAAT                GCTG TTGA CAGC                 TTATAGATCATCATA  61 36
        typA NONE
 CX649_08070 1661235 .. 1661273 +  -3.1  -4.08285   TAAAGAAAATAAAAA  CAGATGTCGGT-ATGTGC CAGT GCGCACCACCTTCATCTG   TTTAACTTTTTTCTG  55 44
 CX649_08085 1664488 .. 1664540 +  -4.2  -4.22535   AACGTTTCTAAAACA TTCATGGGGGCGTC-AATAAGCCGT AAAA ACGACTTATTAGACACCCCAAAAAA TTATTTTACGATTAT  62 256
 CX649_08095 1665611 .. 1665639 +  -3.9   -5.2894   GAAAATAAAAAGCTT        GCTCAAACC GGTAAAAAAAA GGTTTGGGC        TTTTATTTTATCTTT  76 33
 CX649_08100 NONE
         pyc 1670528 .. 1670545 + -11.3  -5.71712   ATAATAAATTTTGTG             CCAGCCA TTTT TGGCTGG              TTTTTTTATGTAAGA 100 37
 CX649_08110 1674579 .. 1674596 +  -9.1  -3.33419   CATCGCTTTCATAAA             GAGGGGC AGAA GCTCCTC              TCTTCCTTTGAAAGT  77 27
 CX649_08115 1674915 .. 1674927 +  -4.8  -3.22491   CAAAGCTGAAAGGAA                CTGG ATGAC CCAG                TTCCTCATAAAATTT  54 32
 CX649_08125 1676482 .. 1676507 + -13.5  -3.36515   CCGAAAATAAAAAAA         TAAAAAGAGGC AAAA GCCTCTTTTTA          TATTTGAAGATCAAA  95 46
 CX649_08145 1679895 .. 1679905 +  -5.4   -4.0896   AATTCTCCATTATTT                 CACT GCA AGTG                 TTTTGGAAAGAATTT  66 40
 CX649_08150 1681107 .. 1681124 +  -2.1  -2.76964   GCAAAAGTAGCATAT             TTCTGTTT CAT AAAC-GAA             TAATGTTAAATATAG  40 31
 CX649_08155 1681624 .. 1681643 + -12.2  -3.74345   CTTAAAAGTAAAAGA            GCTCATGG TCTT CCATGAGC             TTTCAGTCTGTAAGT  91 54
 CX649_08160 NONE
 CX649_08165 1683109 .. 1683123 +   -10  -4.92239   TGCAGCGGGAAATAA               TTGGCG ATT CGCCAA               TTTTTCCATTTTTAA 100 53
 CX649_08170 NONE
 CX649_08175 1684635 .. 1684664 + -10.9  -3.36648   GGCTTCTATAGGACA       TTAAAAAAGGCGC TCAA GCGTCTTTTTTAG        TTGTGCCATATCTTG  87 89
 CX649_08180 1686116 .. 1686130 +  -2.9  -4.59853   TTAATTTAAAATATT               TTTGT ATATG ACAAA               TTTTTGCAAAATTCG  60 32
 CX649_08185 1686456 .. 1686487 +  -7.3  -5.86609   ACGCTTAAAGAAATA      TCCCTTGCAGATA TTTGAT TATCGGCAAGGGC       TTTTTATTTTTTTAA 100 33
 CX649_08190 1687558 .. 1687575 +  -2.8   -3.7795   TCATTTTGGAATTTG             TTTTCA CTTGAA TGAAAA              TTTGATACACTTTCG  51 72
 CX649_08195 NONE
 CX649_08200 NONE
 CX649_08205 1689739 .. 1689756 +  -8.4  -5.18371   CTCTCAAATAAGTAA             GCGGGT ATCAAA ACCCGC              TTTTGTTTTGTCAAA  90 30
 CX649_08215 1691562 .. 1691575 +  -2.3  -4.53602   TGAAAAACGTCCTTT               GATGG ATCG CCTTC                TTTCTTTCCTGTAAA  59 74
 CX649_08220 NONE
 CX649_08225 1694027 .. 1694046 +  -9.3   -5.8187   TATATGTAAACGAAT            GGGCACA AAAACA TGTGCCC             TTTTTTTATTAAATG 100 45
 CX649_08230 NONE
 CX649_08235 1695759 .. 1695778 +   -10  -5.01546   TGTAAAATAAAAAAA            TCCTGCCT GTTC GGGCAGGA             TTTTTATCTGCATTT 100 31
 CX649_08240 1696959 .. 1696988 +  -4.3  -2.93652   ATAAAACAATAAAAA       ATCTTTTTCCAGC TGCA GCTGAAGAAAGAG        CATTTTTTCTCTTTA  48 108
 CX649_08245 1697452 .. 1697462 +  -3.2  -3.93401   GAAGTTCAATATTGG                 CGAT CAA GTCG                 TTATTACTTTGTACG  55 155
 CX649_08250 1698147 .. 1698157 +  -2.4  -2.83371   TACGATAAGGGAAAA                 CGAC GTT GACG                 ATTCTTCATCAAGTA  41 87
 CX649_08255 1699203 .. 1699247 + -14.5  -4.12198   AAATCGAAAAAATAT AAAAGCAAGTGGAGAGAAACG AAT TGTTTTTCTCCACTTGCTTCA TTTTAGGGACTTATC 100 90
 CX649_08280 NONE
 CX649_08285 1706303 .. 1706317 +  -4.3  -3.61103   TGAATCTGTCAATGC               TCGTT ACGAA AACGA               TTTGGCATGAACTTG  55 208
        yunB 1708956 .. 1708969 +  -3.8  -3.94465   ATAAAATGGATATAA               GGGA AGAACA TCCC                TCTTTTACTTTTGGG  57 50
 CX649_08305 1709240 .. 1709257 +  -9.9  -4.08767   ATAGGCAACAGTAAA             GGTTGGT ATTT ACCAACC              TTTTCAACACATCAC  93 27
 CX649_08310 NONE
      spoVAC NONE
      spoVAD NONE
      spoVAE NONE
 CX649_08330 NONE
 CX649_08335 1712675 .. 1712688 +  -2.4  -3.05596   ATCAAAACATTAACG               CCTT TTTTGC AAGG                TTGACTGAAAGGGTG  42 8
 CX649_08340 1713677 .. 1713692 +  -4.8  -2.57132   CCATTATTTTGCCGA              TTTTAC GACC GTAAAA               GTTATCGACAAAGAA  49 82
 CX649_08345 1714341 .. 1714360 +  -2.8  -3.93769   CCTGTATTAACTGTT            CGAGCTGT ACCA ATACCTCG             TTAGTTTTTTCGGAT  53 328
 CX649_08350 1715599 .. 1715623 +  -5.7  -5.86061   TATTTGCAATGACAA          GAGGAAGCG GCGCATA CGATTCCTC          TTTTTTTTAATGAAA  91 42
        ilvD 1717498 .. 1717532 + -15.9  -4.63928   CATAGCTGCACATAT     TTCTAGAAAGACGCG ACTGC CGCGTCTTTCTAGCA     TTTTTCAGATGATCT 100 101
 CX649_08380 NONE
 CX649_08385 1723755 .. 1723789 +  -8.1  -2.63585   TACAGCTTAAATAAA    C-AGCCATCCCATAAAG CTA TTTTA-GGGATGGCTCG    CTCTTTAGCATATCG  66 31
 CX649_08395 1726214 .. 1726242 + -13.3   -3.0693   TGGAGTAAAAATACA        GCCTCTAAAGG AATTAAC CCTTTAGAGGC        TCATTTAATTTGAAA  88 33
 CX649_08405 1730407 .. 1730435 + -11.2  -5.10497   AATGATAAGAAAAAA       CCTGAAAAGCACT GAAT AG-GCTTTTCAGG        TTTTTTGCATAACTT 100 36
 CX649_08420 1732135 .. 1732157 +  -6.2  -3.05343   GGAGTAATCCATCAA           GAAGATCCTG CAC CTGGATCTAC           TGTTCACAGTCTGCA  57 320
 CX649_08430 1734355 .. 1734372 +  -7.7  -5.58522   CCTTTTATTTAAAAA             TGCGGTT TCAC AACCGCG              TTTTTCTTTTCTCTC  93 82
 CX649_08445 1736080 .. 1736092 +  -6.3  -3.16921   ATCTATAAAACGGAG                CATAG CTG CTATG                TTGATGCAGCTTCCT  61 470
 CX649_08450 1737755 .. 1737783 + -12.5  -4.30719   CCGTTTTAATGATGA        CCACTCCCTATAC ATT GTGTAGGGAGTGA        TTTATTGTAAGAGGA 100 32
 CX649_08455 NONE
 CX649_08460 NONE
 CX649_08465 1741095 .. 1741118 +  -8.9  -4.70319   TACGATGTCAAGTAA          CCATCCTCT CCTAAA AGGGGATGG           TTTTCCTTTTGCTAG  93 26
 CX649_08470 NONE
 CX649_08475 1743079 .. 1743095 +  -2.3  -4.62441   TTCATCCGGAATTGG              TGAAATC ATC GATTTAA              TTTATTTATCTCAAG  59 430
 CX649_08485 1744314 .. 1744346 + -13.5  -5.08178   GCTTTTTGGACAAAA      TGACCCAAACAGTCC ATT GTACTGTCTGGGTCA      TTTTTATATATATAT 100 280
 CX649_08490 NONE
 CX649_08495 1746872 .. 1746893 +  -5.8  -4.17296   TAATGAATGAAACGG           GGATGTCC GGCAGA GGACACCC            TTTATATATGTGAAA  69 50
 CX649_08500 1747360 .. 1747383 +  -3.9  -3.13504   ATCGTCCGTGGTATT          CAAAATCAG TAGTGC CTGACTTTG           TGATTTTAGTCAAAA  47 42
 CX649_08505 NONE
 CX649_08510 1749549 .. 1749589 + -11.4  -4.10453   CTACTTCCCATATAA TAAGCCAACGATC--CACTG ATG CAGGGCAGATCGTTGGCTTA TTTTACAAAACTTTG 100 188
 CX649_08515 NONE
 CX649_08520 1751234 .. 1751261 + -17.8  -3.36273   CCGGTAAATACTTTT        TCATCCACGGGG CAAA CCCCGTGGATGG         TTAATCTTCAGGCAA 100 82
         ppx NONE
 CX649_08545 1759333 .. 1759356 +  -3.1  -2.53125   AGTGGTTCGCTACCA          TGACGCTGAC TGATC GGCAGCG-CA          AGTTTTATGAAAACT  42 13
 CX649_08550 1760540 .. 1760576 +  -8.9  -5.67529   TTTCAATAAAAAAGG    GGAGAAAGGATTGTT TTTGCTC AACAAGTCTTTCTCC    TTTTTATTTTTCATT  95 92
 CX649_08560 NONE
 CX649_08565 1765845 .. 1765864 +  -3.6  -3.27704   AGCTTTAAGCAATAT            TTGTGACA AAAT TGTTGCAA             TTCAATTTAAGAAAT  49 52
 CX649_08570 1767795 .. 1767820 +  -7.6  -4.78326   GACACAAGGGTAATT         GGGCGGC-TCA TTTGT TGATGCCGCTC         TTTATTTGTTTAAGC  83 39
 CX649_08575 1768578 .. 1768606 +  -3.2  -3.35197   GAGGAACATGAGAGG       TGCTGGAATGACG TTAA CATCATTTC-GCA        TTAGTGTATATGCGA  48 51
 CX649_08585 NONE
 CX649_08590 NONE
 CX649_08595 1773195 .. 1773207 +  -4.7  -3.78329   TCCATGCTAGAAGGT                GGCGG TAC CAGCC                TTTCCGTTCATAAGC  56 343
 CX649_08605 1774305 .. 1774321 +  -2.3  -2.67747   TAAAAAAATGAAAGT              TTAGGAA TCC TTTCTAG              CTTCTGATATAAAAG  40 88
 CX649_08610 1775779 .. 1775824 + -16.4  -5.64421   AAGGGAAAATGGAGA TCCACGTCAAAATCCCAG TATTTTACCT CTGGGACTTTGACGTGGA TTTTTTATTTCGGGT 100 137
 CX649_08625 1778034 .. 1778050 +  -4.3  -3.53012   AAAAATGGAGGTCGA              GCGGATG CTT CAATCGC              TTTCAAACGAACAGC  55 357
 CX649_08635 NONE
 CX649_08640 1782412 .. 1782459 +  -9.3  -5.30575   GAGGAATAAGCGAGA AGGGGGCTGTCCAAAAAGTCAG GGTAA CTGACTTTTTGGA-GCCCCTCA TTTTTTCACTTTTTA 100 32
 CX649_08645 NONE
 CX649_08650 1785052 .. 1785076 +  -7.7  -4.77165   AAATATTGGGGTTCA          GGCTGCCGCGC TTC GCTTGGTGGCC          TTTTCTTCTGGAAAG  83 59
 CX649_08665 1788555 .. 1788582 + -14.2  -4.79683   TGGATCCAGCTAAAA        GCCAGGGGTTCT CTTA AAAACCCCTGGC         TTTGTTTTATCACTT 100 43
        tsaA 1789339 .. 1789353 +  -4.4  -2.70164   TTCTATTCTATATAA               TTATAT TTT ATATAA               ATTAATTATATACTA  47 139
        modA 1790334 .. 1790347 +  -2.3  -3.28712   TGGGGGCGTCAATAA               GCCGT ATAA ACGAC                TTATAAGACACCCCC  44 108
 CX649_08680 1791123 .. 1791171 +   -22  -3.22475   TAAACGGTGAATTCC CTCCTTACTCAAGGGGAATGTG TCATC CTCATTCCCCTTGAGTAAGCAG TCTTCTCACCATAAA 100 57
 CX649_08695 1794538 .. 1794576 +  -9.6  -3.94188   TGTAACTTGATTTTC   ATACAGGCGAAACAGCGA AAA TTTCTGTTTCGCCTGAAG   TTATTTGCACTGACT  87 101
 CX649_08700 NONE
        arsB NONE
        arsC 1796754 .. 1796790 +  -5.2  -5.00616   CCTCCATATCAATAA   CAAAAAGAGCCTGGAGA ACTT TCTC-GGGCTCTTCGTG    TTTTTTAGGAGAAGA  77 53
 CX649_08720 NONE
 CX649_08725 1800931 .. 1800955 + -11.7  -2.64933   TTTATTATTAAAAAT          TATTATTTGCA AAT TGCAAATAATA          TAGTATAAATAAATA  83 236
 CX649_08730 1801430 .. 1801452 +  -8.4  -2.62513   CAAACCATTATTTTA           AGGCAAGCTA TCT TGGCTTGCCA           ATTCGTTAAACTTAT  66 25
        arsM 1802979 .. 1803012 + -13.3  -2.87931   TGTTATTGTGACATA     GAAAAGGCAGTAGGG CGAT TCCTAGTGCCTTTTC      TATATAAAAAATAAG  87 188
 CX649_08740 1804015 .. 1804028 +  -5.3  -3.80094   ACAGGTGAAGGTAAT               GAAGA TATC TCTTC                TTATCTTAATTTAAC  61 509
 CX649_08745 NONE
 CX649_08750 1806619 .. 1806648 +  -6.4  -2.93251   GTACCAATCGATAGC       AGGATCGGATTC CATTTT GCATCCGATCCC        CTTATTGCTTATTAA  58 66
 CX649_08760 NONE
 CX649_08765 1808961 .. 1808984 + -10.4  -4.63044   CACCAAAGTATTCAA          GAAGAAGGTC ATTT GATCTTCTTC           TTTATTTATATAGGT 100 285
 CX649_08770 NONE
 CX649_08775 NONE
 CX649_08785 1815880 .. 1815890 +    -4  -2.52896   GAGATTTATAGAAAA                 GTTA TTG TAAC                 TGCATTGGAGAATCA  45 63
 CX649_08805 1818580 .. 1818590 +  -2.4  -5.40072   TCTAGACACTTCATA                 AGCC CCT GGCC                 TTTTTTTGCAAAACG  76 117
 CX649_08865 NONE
 CX649_08870 NONE
 CX649_08880 1827338 .. 1827363 +  -6.9  -5.93809   AAACGTTTTTCAAAG         ACTGTTCCTTT CCTG AAAGGGACAGC          TTTTTTTTATGAAAG 100 39
 CX649_08895 NONE
 CX649_08900 1830812 .. 1830832 +  -2.5  -5.81412   TGCCCACTTCAATTA            AACCGATTT TTA AAATCGGCA            TTTTTTTTCCGTAAA  85 292
         ric 1832389 .. 1832409 + -12.5  -4.19371   TAATTTCGGGTGGAA            GAGGCGGCG ATC CCCCGCCTC            TTTCTTCACCATTTC 100 38
 CX649_08920 NONE
 CX649_08925 1834719 .. 1834730 +  -2.2  -3.96148   TGATTTTTTCTGTTT                GAGG TGTT TCTC                 TTTGTACTCCACCGG  52 386
 CX649_08945 1837540 .. 1837559 +  -4.2   -4.1585   ATTTCTTCCAGCATT            GCAGCGGT AAAA ATCGCTCC             TTTTAGCGCTTGTCC  61 352
 CX649_09035 1858467 .. 1858481 +  -4.3  -4.21462   TACATTCGTGGCAGC               CGAAT TCCCC ATTCG               TTTTGAATAATAGAT  63 402
 CX649_09080 NONE
 CX649_09085 1874510 .. 1874554 + -19.6  -3.37493   ACCAAATGCTGGGCA TGGGGGTGTCTAATAAGTCGT TTTT ACGGCTTATT-GACGCCCCCA TTAATGTGTTAGAAA 100 160
 CX649_09675 1989921 .. 1989966 +   -15  -2.61144   CGACAAGAGGTTGGA TTATGATCAGAAGAAATCGG CGAATC CCGATATCTTCTGATCAAAA GTATTTCGAAAATAA  95 54
 CX649_09755 2009014 .. 2009038 +  -4.3   -4.6856   CAGTACAGAGAAAAA          GGAAACCAT TCATAAC ACGGTTTCC          TTTTTCAAATATTTA  70 171
 CX649_10020 2065347 .. 2065381 + -12.3  -4.64766   GTCAGAAGTCGATAG     TTGATGAAACCGGCA CGCTT TGTCGGTTTCATCTA     TTTTTAGAATCTCCC 100 172
 CX649_10030 2066694 .. 2066736 +    -4  -2.64765   TTGCTTTCACAAAAT GTAACGGCCTTTCCCCGA CTGAATA TCGAGAAAAGGCCGCAGC TAAATTGTCTACTTG  45 253
 CX649_10045 2068846 .. 2068867 +    -8  -3.07537   CCTCCTATACGTTAC           GGGCTTCC TTAACC GGAAGTCC            TCATTGTTTCTAAAT  68 14
        ylbJ 2072254 .. 2072265 +  -4.4  -3.88823   CATCCAGCACTCTGT                TCAC TGAT GTGA                 TTTGCATTTCATATT  59 245
 CX649_10080 2073942 .. 2073970 + -11.8  -3.98236   CCTTCTTTACAATAG        TAGGACAGCCTA AATTC TCGGCTGTCCTA        TTTATAATCCAATTT  95 26
 CX649_10120 2078180 .. 2078200 +  -8.3  -6.11392   TAACTGTTTGAAAAA            CTGCAGG CAAATAA CCTGCAG            TTTTTTTATTTATTT 100 30
 CX649_10140 2084261 .. 2084305 + -12.3  -4.12198   AAAATCGAAAAATAT AAAAGCAAGTGGAGAGAAACG CGT TGTTTCTCTCTGCTTGCTTCC TTTTAGGGACTTATC 100 462
 CX649_10150 2085227 .. 2085252 + -13.3  -4.62471   CCTTTAAATCAAGCA         GAGGCGGGAGA ATTT TCTCCGGCCTC          TTTTTGCCGCTTACG 100 34
 CX649_10170 2088071 .. 2088091 +  -7.7  -3.34455   TTTTTAGCTACTGCC            CTTTTCATT CTA AATGAAAGG            TTGGATTTATAATGA  69 34
 CX649_10175 2090765 .. 2090801 + -16.8  -4.77165   AAGTTCCTAAATGGA    GCCAGTGAAGAAAAAC AGCTC GTTTTTCTCCACTGGC    TTTTGTTATAAAAAA 100 60
 CX649_10265 2104986 .. 2105008 +  -5.7  -5.19916   ATGGATCTGCTTCGT           CGTTTTTGA CGCGA TCAAAAATG           TTTTTTAAGTCTTTT  85 362
 CX649_10280 2107101 .. 2107113 +  -9.1  -3.54459   ACTGTTTTCCAACAA                CCGCT ATG AGCGG                TTTAAACAAGATTAC  74 244
 CX649_10435 2135523 .. 2135536 +  -3.1  -4.77157   GTTGAAGAACGCAAA               TAGGC GATC GCTTA                TTTTTCATGAATTGG  65 44
 CX649_10440 NONE
 CX649_10445 2137418 .. 2137436 + -10.3  -5.11033   AATTTATAAAAAAAA             TGGGGTG AATCG CACCCCA             TTTTTTAACATTATA 100 85
 CX649_10530 2155103 .. 2155139 + -19.1  -4.17316   ATGAAAGCAACAAAA    TCAAGTAGAGAAAAACG GAT TGTTTTTCTCTACTTGA    TTATTTTCGGGACAT 100 220
 CX649_10575 2163302 .. 2163331 + -14.4  -4.62984   GCTTTAAAAGAACAA       CCCCCACGGAAA AACGAA TTTCTGTGGGGG        TTTTGTGTATCATAA 100 52
 CX649_10585 2164949 .. 2164976 +  -9.2  -4.92239   CAATTAAACAAAAAA        GAGAGCTGTTTC TTCA GAAGCAACTCTC         TTTTTCCCTTTTTAC 100 34
 CX649_10590 2166687 .. 2166725 +  -5.9  -4.77036   TTCATTTATAATATT   TAAAGGTGCTGGGAGGG CTTAT CTCTCCTGGCTCCTCTG   TTTTTAATCCTCCCA  77 30
 CX649_10665 2180867 .. 2180881 +  -8.6  -4.07568   AGGGCTGAGCCCAAG               GTCGAT TCA ATCGAC               TTTTCGGACAGCCCC  82 131
 CX649_10675 2181956 .. 2181991 +  -2.6  -4.39002   TTACCAATACAAATA    GGACTGAAACTATGAAT GAT ATCCAAAGT-TCAGCCC    TTTTGTAGCAGATTT  58 289
 CX649_10715 NONE
 CX649_10720 2193615 .. 2193633 +  -8.8  -4.13014   TCCCGAAAACAATTA             GGGCTGCA ACG TTCAGCCC             TTTTGAAGCTGTCGA  85 25
 CX649_10760 2207718 .. 2207740 +  -3.4  -4.35675   GCCCCCGCTTTTTAA           CAATCTGC TCTCTCT GCCGATTG           TTTTGATAGCTTTTT  62 393
 CX649_10800 2216085 .. 2216111 +    -8  -5.75342   GTTTTCAGAAAAAAA         GTAACCGCCG TTAGGCT CAGCGGTTAC         TTTTTTTTCAGGAGG  93 12
 CX649_10940 NONE
 CX649_10945 2241738 .. 2241752 +  -4.2   -6.4275   GCGCGCTAAGCTGAA               AACCGA GGA TCGGTC               TTTTTTTTATTTTTC 100 282
 CX649_10965 2247582 .. 2247610 + -10.4  -3.41795   CCGGGCGCACAAGAA        TAAAGCAGCAGA ACAAG TCTGCCGCTTTA        TTATAATCCACATTT  85 196
 CX649_10980 2252212 .. 2252238 + -12.4  -2.97744   CGGGCGCACAAGGAA         AGACGATTATCC TCG GGATAATCGTCC         ATTTGCATTTATTTT  87 337
 CX649_11060 2268433 .. 2268463 + -11.9  -3.29727   AATTTTCAAACTAAT       GCTCCTAGAAGCT TTAAT GGCTTCCAGGAGC       TATTCATTCATTAAA  89 43
 CX649_11070 2270709 .. 2270735 + -10.9  -4.74801   TGCAAAAACTTAAAA         GCTTGCCGC ACATAGAAA GCGGCAAGC         TTTTTACTCGAATTA 100 465
 CX649_11085 2272813 .. 2272833 +  -2.5  -4.46212   TTCTTGTCGCACCGG            CTTCTATCA TCA TGATCGCAG            TTTTATAATCGCGGA  60 161
 CX649_11155 2287887 .. 2287921 +  -8.7  -5.84381   AGCATAAAAATAAAA     GCAATCATCAAGC TTTTATCCC GCTTGTTGATTGC     TTTTTTTCTTGCTGA 100 34
 CX649_11165 2289368 .. 2289396 + -11.8   -4.8269   TGATCGGCTCGTAAA        GAGAGAGGCTGC AAACG GCAGTCTCTTTC        TTTTTGCTCCTTGTA 100 27
 CX649_11185 2294421 .. 2294451 +  -4.7  -4.08945   AGAAATAAGCCGTTT       CGGTTCAAGTGGT CGTAT ACGGCTTGAAACG       TTTTGACCACATCCT  61 441
 CX649_11230 NONE
        sigK 2300973 .. 2301011 + -21.3  -4.57569   TTTATCAAAAAAGAG   GGGCTCAAAAGAGTCAG CTATA CTGACTTTTTTGAGCCC   TTTTTCAAGAAATGA 100 433
 CX649_11340 2322521 .. 2322564 + -14.7  -5.19212   GAAAACGTAAATAAA AGGGGGCGTCAA-TAAGCCG AAAAA CGGCTTATTTGACACCCCCA TTTTTTAATCGTCGT 100 110
 CX649_11365 2329034 .. 2329054 + -11.2  -5.74086   AAACTCATAAAAAAA            TCGTGAGC AGCTC GCTCACGA            TTTTTTATTTGCTTT 100 31
       spoVB NONE
 CX649_11405 2340117 .. 2340142 +  -3.2    -5.252   CAGGCTTAAAAAGAA         AAAGGCTGAC ATTTAA GTCAGCCCTG          TTTTTTGTAGAACTA  74 32
 CX649_11480 NONE
 CX649_11485 2354563 .. 2354590 +  -9.1  -5.75599   TCATTGATTAATCAA        GCCAGGCATCC TGCAAT GGATGCTCGGC         TTTTTTTATAGTTTA 100 34
 CX649_11545 2364822 .. 2364855 +    -4  -4.32607   CCCTGTGCTTTTTTG     TCTATTTTTTTGGT TCGTAT ACCTAAAAAAGAGA      TTTGTTCCATTTTCG  62 145
 CX649_11550 2365330 .. 2365346 +  -2.3  -4.62069   GGATTAAGCACGTAC              TCCAAAA AAT TTTTTGA              TTTTTGCGATAACAC  59 222
 CX649_11605 2378427 .. 2378450 +  -3.1  -4.59982   TTTACTTTGTTCAGT          GCAATTCGC ATGTGA GGGGATTGC           TTTATTTCGTTATAC  64 459
 CX649_11650 2387761 .. 2387781 +  -2.5  -5.49569   TGCGTTTTCCCAGGC            TTTGAAGAG GTT CTCGCCAAA            TTTTTTCTATTGATC  78 517
 CX649_11720 2406078 .. 2406126 +  -9.1  -5.30575   GAAAAGCAAAAATTA AAAGGGGCTGTCCAAAAAGTCAG GGTAA CTGACTTTTTGG--AGCCCCTCA TTTTTTCACTTTTTA 100 382
 CX649_11785 2415858 .. 2415873 +    -9  -4.28254   TTTGTGCTGTTTTTT              CAGGCA TTCC TGCCTG               TTTTAGCTCTTCAAG  85 126
 CX649_11845 2429238 .. 2429260 + -12.1  -4.20783   TGATTTCAATAAAAA           TGAAGGTGC TATCT GCACCTTCA           TTTGTTAGCTGGAAT 100 90
 CX649_11870 2434148 .. 2434170 + -10.6  -3.34125   GGATTGAAAGAGACT           GGAGCTGG GAAATAA CCAGCTCC           TGCTTTTTAGTTGTA  85 11
 CX649_11885 2436485 .. 2436507 + -11.3  -3.16965   ATAAGCATTCTGAAG           GCAGTTCCC ATTGC GGGAGCTGC           TGTTAGCTTCCATTT  87 177
 CX649_11910 2438878 .. 2438891 +  -2.3  -5.02476   ATCAATTGAAATAAC               GTTGC AAAA GCATC                TTTTTTCCGGGCTCT  69 263
 CX649_12100 2477862 .. 2477877 +    -9  -4.28254   TTTGTGCTGTTTTTT              CAGGCA TTCC TGCCTG               TTTTAGCTCTTCAAG  85 126
 CX649_12160 2491242 .. 2491264 + -12.1  -4.20783   TGATTTCAATAAAAA           TGAAGGTGC TATCT GCACCTTCA           TTTGTTAGCTGGAAT 100 90
 CX649_12185 2496152 .. 2496174 + -10.6  -3.34125   GGATTGAAAGAGACT           GGAGCTGG GAAATAA CCAGCTCC           TGCTTTTTAGTTGTA  85 11
 CX649_12200 2498489 .. 2498511 + -11.3  -3.16965   ATAAGCATTCTGAAG           GCAGTTCCC ATTGC GGGAGCTGC           TGTTAGCTTCCATTT  87 177
 CX649_12225 2500882 .. 2500895 +  -2.3  -5.02476   ATCAATTGAAATAAC               GTTGC AAAA GCATC                TTTTTTCCGGGCTCT  69 263
 CX649_12355 NONE
 CX649_12350 2528936 .. 2528947 -  -4.4  -3.60348   CCCAACAGCAGAGAA                GAGA GGTT TCTC                 ATTCTTTCGCCATTT  55 51
 CX649_12345 NONE
 CX649_12340 2526920 .. 2526951 - -13.9  -6.23317   ATAAAAATAAAAAAA      TAACGTGCGGCTCC ATCAA GGAGC-GCACGTTA      CTGCGTATTTGTCAC 100 23
        pfkA 2525784 .. 2525807 -  -3.2  -2.61322   ATACCTCCTAAACAT          TATGAAAACG ATCC CATGTTCATA           CTTTATATAGAAAGT  43 28
         pyk 2523964 .. 2523986 -  -7.8  -5.74122   TACTATACAAAAAAA           GAGAAGGA ACTGAAA TCCTTCTC           CTTTCAATCAAAATT  93 39
 CX649_12325 2523260 .. 2523271 -    -3  -4.83169   ATTTTTTCACAAAAA                GAAA ATGC TTTC                 ATTTCTTTTGTGAAA  65 228
 CX649_12320 2522024 .. 2522042 -  -8.2  -3.18728   ATGCTTAACAGGGAA             GAAAAAGG AAT CCCTTTTC             TATTTTACCTGTTAG  70 37
 CX649_12315 2520649 .. 2520673 - -10.8  -2.68338   ATGAATCTAAATGGA          GAGCTACTTC GTAAA GAAGCAGCTC          TCAGTTCTTTGTTTA  81 38
         mdh 2519614 .. 2519635 -  -8.1  -5.18726   CTTTTATAAGAAAAA           GGAGGAACAT AAC ATGT-CCTCC           TTTTTCTATCATGCA  90 41
 CX649_12305 NONE
 CX649_12300 2516814 .. 2516837 -  -7.5  -5.96219   CAGCCATAAAAAAAA          GACGGAAAC GTAATT GTTTCCATC           TGCAAATGGGCTCCT 100 120
        hflK NONE
 CX649_12290 NONE
 CX649_12285 NONE
 CX649_12280 NONE
        ytaF NONE
 CX649_12270 2509831 .. 2509849 -  -7.4   -6.4275   TAAAAATAAAAAAAA             CCGCTC TATTCAC GAGCGG             ATTAACCAATTCCCC 100 27
 CX649_12265 2508635 .. 2508664 - -12.3  -4.42156   AAACAAAAAGAAGAA       GAGGGTCAATCTT TGTA AAGATCAACCCTC        CCATCATTTTATACA 100 34
 CX649_12260 2507969 .. 2507994 -  -5.5  -5.16133   ATTATAATATAAAAA         GAGGTG-CAG TAAAAAG CTGACACCTC         TTTGCATTTCCATTC  79 62
        nrdR 2507071 .. 2507081 -  -2.6  -2.72661   GATGATGTCCAATCA                 TTTT TTC AAAA                 CCTTCCCAAATAGCA  41 61
 CX649_12250 NONE
 CX649_12245 2504644 .. 2504689 - -10.6  -4.40552   TCCAGCAAAAAAAGA TCCCCCCCTTTATATAGCAA GTCCTG TTTCTATATATATGGGGGGA TGGCATTATTTAGAA 100 59
        ytxC 2503494 .. 2503521 - -13.5  -4.85782   TCTTGCAAAAATAAA        CACCCGTCCCT AAAAGA AGGGACGAGTG         TTGTATGTAAAACCC 100 313
 CX649_12235 2501500 .. 2501523 - -11.8  -5.41143   TATGTTTCAAAAAAA          GGAAATCAGC AAAC GCCGATTTCC           TTATTTTCTCCCTTC 100 26
 CX649_12230 2500166 .. 2500192 -  -9.4  -5.65927   TATGCAAATAAAAAA         CGCGTAGACGCA CAC TGCACCCACACG         TTGAATACACGAACT 100 498
 CX649_12220 NONE
 CX649_12215 NONE
 CX649_12210 NONE
 CX649_12205 2498251 .. 2498264 -  -3.1   -4.6313   TCGAAAATAAAAGAA               GCATA TCCT TACGC                CAAAATCGACTGGAA  64 376
 CX649_12195 NONE
 CX649_12190 2496150 .. 2496176 -  -9.4  -3.28524   AAGGATTGAAAGAGA         CTGGAGCTGG GAAATAA CCAGCTCCTG         CTTTTTAGTTGTATG  77 30
 CX649_12180 NONE
 CX649_12175 NONE
 CX649_12170 2493717 .. 2493727 -  -3.2  -2.61027   GTATGAAACGAACAT                 GAGA AAA CCTC                 CTTTTAAGCTTGTTT  43 29
 CX649_12165 2491242 .. 2491264 - -12.1  -5.08601   TGATTTCAATAAAAA           TGAAGGTGC TATCT GCACCTTCA           TTTGTTAGCTGGAAT 100 66
 CX649_12155 NONE
 CX649_12150 2489279 .. 2489290 -  -4.4  -4.41348   GGGGGTCTAAATAAA                GATG TTTC CATC                 GTCCCTTTACGTCTA  64 38
 CX649_12145 NONE
 CX649_12140 NONE
 CX649_12135 2484511 .. 2484546 - -12.1  -2.65126   TAGAATTTTAAATAG    GAAAAAGCGGAGA CCTTTTCTTT TCTCCGCTTTTTC     AAGCAAAAAACACCA  84 119
 CX649_12130 2482642 .. 2482659 -  -7.1  -4.07687   ATCTTCCCTTCAAAA             TGAATGA ATGG TCATTCA              TTTATATGATATTTA  73 108
 CX649_12125 NONE
 CX649_12120 NONE
 CX649_12115 2480187 .. 2480209 -  -3.3  -5.40474   ATTTGTTCAAAAAAA           TACGAGTCC ATTCA GGACACGTT           AAGAGGAATGGATTT  77 24
        trxA 2479663 .. 2479693 - -12.7  -3.97102   ATTTAAAAGCAAGAA      GGCGCTC-CAAAAG GTAA CTTTCGTGAGCGCC       TCTTTTTATATTTTA 100 43
 CX649_12105 2477598 .. 2477623 -  -3.3  -5.10497   AATTGATCGAAAAAA         GGATGAAGCTT TTCA AAGATTTATCC          TTCCAACTAGAAGCA  72 223
 CX649_12095 NONE
 CX649_12090 NONE
 CX649_12085 2473777 .. 2473804 - -14.3  -3.08032   CCGTTTCTAAAATTA        GGAACACCTTG ACATTG CAAGGTGTTCC         TTTTTCACAATATAC  93 42
 CX649_12080 2473220 .. 2473230 -  -2.6  -3.45839   ATGTGGAAAGACGAA                 TTTT TTC AAAA                 AGTCACAAGCCTTTT  47 144
 CX649_12075 NONE
 CX649_12070 2471840 .. 2471864 - -10.8  -5.66684   CAATGGACAAAAAAA          CAGCTTGCTC ATTTA GAGCAAACTG          TTTTCGTTAAAGTTA 100 9
 CX649_12065 2470604 .. 2470626 -  -5.6  -4.14543   GAAAACATGAAAGAA          GAGGC-AGC TATCAT GCTCGCCTC           TAAAGTCTCATTCTT  66 63
         rph NONE
 CX649_12055 NONE
 CX649_12050 2468646 .. 2468678 - -10.7  -5.40474   ACTTTTTTAAAAAAA      TTTTTTGAGGGAGAA AAA TTCTCCCTCAAGGAA      GAGTGGTTAAGCAAA 100 32
 CX649_12045 2468371 .. 2468420 -  -9.6  -5.30575   TAAAAATCGAAAAAA TATAAAAGCAAGTGGAGAGAAAC GAATT GTTTTTCTCCACTTGCTTC-ATT TTAGGGACTTATCGG 100 88
 CX649_12035 2466932 .. 2466943 -  -4.4  -3.60348   CCCAACAGCAGAGAA                GAGA GGTT TCTC                 ATTCTTTCGCCATTT  55 51
 CX649_12030 NONE
 CX649_12025 2464916 .. 2464947 - -13.9  -6.23317   ATAAAAATAAAAAAA      TAACGTGCGGCTCC ATCAA GGAGC-GCACGTTA      CTGCGTATTTGTCAC 100 23
        pfkA 2463780 .. 2463803 -  -3.2  -2.61322   ATACCTCCTAAACAT          TATGAAAACG ATCC CATGTTCATA           CTTTATATAGAAAGT  43 28
         pyk 2461960 .. 2461982 -  -7.8  -5.74122   TACTATACAAAAAAA           GAGAAGGA ACTGAAA TCCTTCTC           CTTTCAATCAAAATT  93 39
 CX649_12010 2461256 .. 2461267 -    -3  -4.83169   ATTTTTTCACAAAAA                GAAA ATGC TTTC                 ATTTCTTTTGTGAAA  65 228
 CX649_12005 2460020 .. 2460038 -  -8.2  -3.18728   ATGCTTAACAGGGAA             GAAAAAGG AAT CCCTTTTC             TATTTTACCTGTTAG  70 37
 CX649_12000 2458645 .. 2458669 - -10.8  -2.68338   ATGAATCTAAATGGA          GAGCTACTTC GTAAA GAAGCAGCTC          TCAGTTCTTTGTTTA  81 38
         mdh 2457610 .. 2457631 -  -8.1  -5.18726   CTTTTATAAGAAAAA           GGAGGAACAT AAC ATGT-CCTCC           TTTTTCTATCATGCA  90 41
 CX649_11990 NONE
 CX649_11985 2454810 .. 2454833 -  -7.5  -5.96219   CAGCCATAAAAAAAA          GACGGAAAC GTAATT GTTTCCATC           TGCAAATGGGCTCCT 100 120
        hflK NONE
 CX649_11975 NONE
 CX649_11970 NONE
 CX649_11965 NONE
        ytaF NONE
 CX649_11955 2447827 .. 2447845 -  -7.4   -6.4275   TAAAAATAAAAAAAA             CCGCTC TATTCAC GAGCGG             ATTAACCAATTCCCC 100 27
 CX649_11950 2446631 .. 2446660 - -12.3  -4.42156   AAACAAAAAGAAGAA       GAGGGTCAATCTT TGTA AAGATCAACCCTC        CCATCATTTTATACA 100 34
 CX649_11945 2445965 .. 2445990 -  -5.5  -5.16133   ATTATAATATAAAAA         GAGGTG-CAG TAAAAAG CTGACACCTC         TTTGCATTTCCATTC  79 62
        nrdR 2445067 .. 2445077 -  -2.6  -2.72661   GATGATGTCCAATCA                 TTTT TTC AAAA                 CCTTCCCAAATAGCA  41 61
 CX649_11935 NONE
 CX649_11930 2442640 .. 2442685 - -10.6  -4.40552   TCCAGCAAAAAAAGA TCCCCCCCTTTATATAGCAA GTCCTG TTTCTATATATATGGGGGGA TGGCATTATTTAGAA 100 59
        ytxC 2441490 .. 2441517 - -13.5  -4.85782   TCTTGCAAAAATAAA        CACCCGTCCCT AAAAGA AGGGACGAGTG         TTGTATGTAAAACCC 100 313
 CX649_11920 2439496 .. 2439519 - -11.8  -5.41143   TATGTTTCAAAAAAA          GGAAATCAGC AAAC GCCGATTTCC           TTATTTTCTCCCTTC 100 26
 CX649_11915 2438162 .. 2438188 -  -9.4  -5.65927   TATGCAAATAAAAAA         CGCGTAGACGCA CAC TGCACCCACACG         TTGAATACACGAACT 100 498
 CX649_11905 NONE
 CX649_11900 NONE
 CX649_11895 NONE
 CX649_11890 2436247 .. 2436260 -  -3.1   -4.6313   TCGAAAATAAAAGAA               GCATA TCCT TACGC                CAAAATCGACTGGAA  64 376
 CX649_11880 NONE
 CX649_11875 2434146 .. 2434172 -  -9.4  -3.28524   AAGGATTGAAAGAGA         CTGGAGCTGG GAAATAA CCAGCTCCTG         CTTTTTAGTTGTATG  77 30
 CX649_11865 NONE
 CX649_11860 NONE
 CX649_11855 2431713 .. 2431723 -  -3.2  -2.61027   GTATGAAACGAACAT                 GAGA AAA CCTC                 CTTTTAAGCTTGTTT  43 29
 CX649_11850 2429238 .. 2429260 - -12.1  -5.08601   TGATTTCAATAAAAA           TGAAGGTGC TATCT GCACCTTCA           TTTGTTAGCTGGAAT 100 66
 CX649_11840 NONE
 CX649_11835 2427275 .. 2427286 -  -4.4  -4.41348   GGGGGTCTAAATAAA                GATG TTTC CATC                 GTCCCTTTACGTCTA  64 38
 CX649_11830 NONE
 CX649_11825 NONE
 CX649_11820 2422507 .. 2422542 - -12.1  -2.65126   TAGAATTTTAAATAG    GAAAAAGCGGAGA CCTTTTCTTT TCTCCGCTTTTTC     AAGCAAAAAACACCA  84 119
 CX649_11815 2420638 .. 2420655 -  -7.1  -4.07687   ATCTTCCCTTCAAAA             TGAATGA ATGG TCATTCA              TTTATATGATATTTA  73 108
 CX649_11810 NONE
 CX649_11805 NONE
 CX649_11800 2418183 .. 2418205 -  -3.3  -5.40474   ATTTGTTCAAAAAAA           TACGAGTCC ATTCA GGACACGTT           AAGAGGAATGGATTT  77 24
        trxA 2417659 .. 2417689 - -12.7  -3.97102   ATTTAAAAGCAAGAA      GGCGCTC-CAAAAG GTAA CTTTCGTGAGCGCC       TCTTTTTATATTTTA 100 43
 CX649_11790 2415594 .. 2415619 -  -3.3  -5.10497   AATTGATCGAAAAAA         GGATGAAGCTT TTCA AAGATTTATCC          TTCCAACTAGAAGCA  72 223
 CX649_11780 NONE
 CX649_11775 NONE
 CX649_11770 2411773 .. 2411800 - -14.3  -3.08032   CCGTTTCTAAAATTA        GGAACACCTTG ACATTG CAAGGTGTTCC         TTTTTCACAATATAC  93 42
 CX649_11765 2411216 .. 2411226 -  -2.6  -3.45839   ATGTGGAAAGACGAA                 TTTT TTC AAAA                 AGTCACAAGCCTTTT  47 144
 CX649_11760 NONE
 CX649_11755 2409836 .. 2409860 - -10.8  -5.66684   CAATGGACAAAAAAA          CAGCTTGCTC ATTTA GAGCAAACTG          TTTTCGTTAAAGTTA 100 9
 CX649_11750 2408600 .. 2408622 -  -5.6  -4.14543   GAAAACATGAAAGAA          GAGGC-AGC TATCAT GCTCGCCTC           TAAAGTCTCATTCTT  66 63
         rph NONE
 CX649_11740 NONE
 CX649_11735 2406642 .. 2406674 - -10.7  -5.40474   ACTTTTTTAAAAAAA      TTTTTTGAGGGAGAA AAA TTCTCCCTCAAGGAA      GAGTGGTTAAGCAAA 100 32
 CX649_11730 2406367 .. 2406416 -  -9.6  -5.30575   TAAAAATCGAAAAAA TATAAAAGCAAGTGGAGAGAAAC GAATT GTTTTTCTCCACTTGCTTC-ATT TTAGGGACTTATCGG 100 88
        ilvB NONE
        ilvN NONE
 CX649_11705 NONE
 CX649_11700 NONE
        leuB 2398467 .. 2398494 - -10.6  -2.64942   TCTATTAAGAAAACG        GTGAGCTCCTCC TGCC GGAAAAGCCCAC         ACCCCCCCATTTTAT  78 37
        leuC NONE
        leuD 2396374 .. 2396413 -    -8  -4.63179   AAACAAGAATCAAAA  GAAAAAGCG-GAGGATG CAATCAT CATCCCCACGCTTTTGC  CTTTTGTTCAAATTG  84 8
 CX649_11680 2395301 .. 2395311 -  -5.4  -2.87468   TTTTATTATACCATA                 GGAT TCA ATCC                 TTTCAATAGGACTCT  52 39
 CX649_11675 2393768 .. 2393792 - -15.1   -4.4009   TTTCATTTTATAAAA          CAAGGCACGAT CAA ATCGCGCCTTG          TTATCAACTTTATCA 100 67
 CX649_11670 2392183 .. 2392213 - -17.1  -4.26076   GGATTTTCATGAAAA       GAAGGATCGAGTT GTATG AACTCGATCCTTC       TTATTTTTATGAGAA 100 106
        lonB 2390380 .. 2390402 -  -8.5  -5.05606   CTCAACAAAAATAAA          GGTTCAGTGC CACG GC-CTGAACC           CTGTTAGGCATTTGG  95 56
         lon NONE
        engB 2387272 .. 2387310 -  -3.2  -5.61277   CAGAAAAAAATAAAA  GGAAACAGCTCGAAGCG GTTAAG CTTCTCGAGCT-TTTCC   TTCTGTATCCAGCCT  82 55
 CX649_11645 NONE
 CX649_11640 NONE
 CX649_11635 NONE
 CX649_11630 NONE
 CX649_11625 NONE
        hemL 2380333 .. 2380369 - -17.6  -5.28942   CACGGGAAACAAAAA    TAAAAGGACCAGCTTC AATCA GAAGCTAGTCCTTTTA    GCTCGTTATCTCAAA 100 31
      spoVID 2379059 .. 2379086 -  -7.7  -5.28281   AGAAAATAAAGAAAA        GCTTGAGCTGG TTTGAT CCCACTCAAGC         CGCTTGCAAAAATTA  89 38
 CX649_11610 2377507 .. 2377518 -  -7.2  -3.05463   ACTTCTTTCAGGTAA                CGGC TAAT GCCG                 GCTCCCTTTACTAAA  63 519
 CX649_11600 2374714 .. 2374730 -  -9.4  -4.67982   TTTGATGGAAGAAAA              TCCGGG GCATA CCCGGA              TTTGTTTTAGCCTTT 100 32
 CX649_11595 2373287 .. 2373311 -  -8.6  -5.80951   ATGTAAAATAAAAAA          GAACGAGACA TTTGT CGCCTCGTTC          ATAATTGTTGTCGTT 100 61
 CX649_11590 2372253 .. 2372280 -  -4.8  -6.09196   GTGAAAATAAAAAAA        GAAAACGAATGC TCGA GCAAACGCTTTC         CCGTTATCAAGAAAG  93 32
 CX649_11585 NONE
 CX649_11580 2370766 .. 2370793 -  -9.2  -4.96762   CACACATCATAAAAA        GAGGTGCACT TCATATCC AGTGCACCCC         AACAATTGACATAGA 100 57
 CX649_11575 NONE
        mreC NONE
        mreD NONE
 CX649_11560 NONE
        minD 2365180 .. 2365203 -  -4.6  -5.02476   ACAGCCTTCAAAAAA          TCTCCCACCT CAAG AGATAGAAGA           AAAAAACGATCAGCA  76 140
 CX649_11540 2362504 .. 2362532 - -11.9  -4.98531   TTTTGAAATCAAAAA        GAAGACCACAAAA TGC TTTTGTCGTCTTC        TTTTTGAAATAGTAG 100 95
 CX649_11535 NONE
 CX649_11530 NONE
 CX649_11525 NONE
        rplU NONE
 CX649_11515 NONE
 CX649_11510 2357940 .. 2357960 -  -7.6   -5.2853   CACCGAAAAAGAAAA            CTCTAACC AAAAA GGCTAGAG            TTTTTCAAGTGTTTG  89 42
 CX649_11505 NONE
 CX649_11500 2355992 .. 2356005 -  -3.9  -3.06312   AAATGTTTTATTCAA               TGAAT TCAA ATTCA                AATTCCAGCAGCCTT  47 4
 CX649_11495 NONE
 CX649_11490 2354563 .. 2354590 -  -9.1  -3.40867   TCATTGATTAATCAA        GCCAGGCATCC TGCAAT GGATGCTCGGC         TTTTTTTATAGTTTA  79 31
 CX649_11475 NONE
 CX649_11470 NONE
 CX649_11465 2349171 .. 2349192 -  -6.5  -5.69262   TTACAAAAATAAAAA           TACCCGAGG AGGA CCCCAGGCA            TTCAAATTGTTCTTC  89 91
 CX649_11460 2347793 .. 2347815 -  -7.8  -5.63517   TTTTCAAAGAAAAAA           GAGACGAT TTTTATC ATCGTCTC           CAATAAAATTAATCT  93 34
        nadE NONE
 CX649_11450 2346158 .. 2346184 - -13.1  -4.36914   TTGTTCTTCACAAAA         GAAACAGGGAG GAGTT CTCCCTGTCTC         GTTAGCGGTTATTTC 100 27
 CX649_11445 2345092 .. 2345102 -  -3.2  -4.03023   AAGTATAACAAAAGA                 GGCA AAA TACC                 TTTTTCACATGCCAC  55 273
 CX649_11440 2344577 .. 2344595 - -10.3  -4.88293   AACTGCAAAAATAAA             CCGATGC AAAAA GCATCGG             TCCTTTTATTTGAAT 100 31
 CX649_11435 NONE
 CX649_11430 NONE
 CX649_11425 NONE
 CX649_11420 NONE
         tgt NONE
        yajC 2340120 .. 2340139 -  -9.3  -5.61881   GCTTAAAAAGAAAAA            GGCTGAC ATTTAA GTCAGCC             CTGTTTTTTGTAGAA 100 41
 CX649_11395 NONE
 CX649_11390 2335284 .. 2335333 - -12.5  -3.10173   ATAAATCCCTAAAAT GAAGGAGCC--CCAAAAAGTCAG TTAACC CTGACTTTTTGGACAGCCCCTTC GAACTTTTACAGCGG  87 48
        recJ NONE
 CX649_11380 2331884 .. 2331900 -  -5.8  -5.75342   TTGTTTTAAAAAAAA              GCACCC ATTAA GAGTGC              TTCATTTATAGATTT  88 48
 CX649_11375 NONE
 CX649_11370 2329034 .. 2329054 - -11.9  -5.68039   AAACTCATAAAAAAA            TCGTGAGCA GCT CGCTCACGA            TTTTTTATTTGCTTT 100 30
 CX649_11360 NONE
 CX649_11355 NONE
        ssrS NONE
 CX649_11345 2322522 .. 2322563 - -20.4  -4.97824   AAAACGTAAATAAAA GGGGGCGTCAA-TAAGCCG AAAAA CGGCTTATTTGACACCCCC ATTTTTTAATCGTCG 100 31
 CX649_11335 NONE
 CX649_11330 NONE
 CX649_11325 2318252 .. 2318268 -  -4.3  -3.70902   CCTTTCACATCCAAA              GGCAAAG AGG CTGCGCC              AAGTTAACAAATCTC  55 66
 CX649_11320 NONE
 CX649_11315 NONE
 CX649_11310 2314773 .. 2314791 - -12.4  -3.24709   GAAAATATGCATGAA             GGCGCCCA TTT TAGGCGCC             TCAAATCGCACGATC  91 26
 CX649_11305 2313374 .. 2313415 -  -6.9  -5.45802   CTCGCAAAATAAAAA CTCTCG--CCTATGTAAAT GCTCTG ATTTACACAGGGACGAGAG TTACTCGCGGTACCA  93 268
 CX649_11300 2310696 .. 2310709 -  -3.9  -2.57489   TATGAATGGAATTTA               TGAAA CGGA TTTCA                CCCAGTCTTCGACAA  45 9
 CX649_11295 NONE
 CX649_11290 NONE
 CX649_11285 2309626 .. 2309642 - -10.1  -5.80364   ACCTCAACAAAAAAA              GCACCGC AAA ACGGTGC              TTATTCCTCTTCTAA 100 26
 CX649_11280 2308283 .. 2308305 - -10.7  -3.90291   ACTCCCTTAATCAAA           GAAGAGTTC TGTTC GAACTCTTC           AAGTTTGTTTTTTTA  93 90
 CX649_11275 NONE
 CX649_11270 NONE
 CX649_11265 2305235 .. 2305262 - -10.7  -4.30001   TAAAAAATGAAAGAA        CTTTTCTGCCG TTCTTT CGACAGAAAAG         AATCTTTTATAACAT 100 140
 CX649_11260 2304643 .. 2304670 -  -8.5  -5.64274   TTATTCATAAAAAAA        CACCTCGTC TTATATTTTC GACGAGGTG         CGCACATCTTAAACT  95 60
 CX649_11255 NONE
 CX649_11250 NONE
 CX649_11245 2301281 .. 2301306 -  -3.4  -2.79188   CACCTAATCGAATTA         GTTATTCTAT ATTATA AAAGAATAAC          ATATCGATTCGGGCT  44 70
 CX649_11240 2300970 .. 2301014 - -13.7  -5.14563   TGTTTTATCAAAAAA GAGGGGCTCAAAAGAGTCAGC TAT ACTGACTTTTTTGAGCCCTTT TTCAAGAAATGATTA 100 38
 CX649_11225 NONE
 CX649_11220 NONE
        aroE NONE
 CX649_11210 NONE
 CX649_11205 NONE
 CX649_11200 NONE
        rsfS 2294806 .. 2294820 -  -2.1  -3.15632   ACACAGATGCAAAAT               GCTTA TAAAT CAAGC               TAACCACTCGCTCAC  44 20
 CX649_11190 2294049 .. 2294075 -  -4.4  -5.79588   CTAAAATGAAAAAAA         CCATCGAAAAAA AAT TACATTCGATGG         TTTCAACTTTTTTTC  91 28
 CX649_11180 NONE
 CX649_11175 NONE
 CX649_11170 2289027 .. 2289054 - -12.1  -2.80513   ACACTTCAACATAAT        GGAGAATTGGC AGCGAA GCCAATCCTCC         GATTTATATGAACGT  84 438
 CX649_11160 2287661 .. 2287671 -  -2.4  -2.81628   AAACAAATGAAACAC                 GCCG TGC CCGC                 AATACATCAATGAAA  41 248
 CX649_11150 2286254 .. 2286265 -  -2.2  -3.15027   ATGCTTCATGAAAAT                CCTC CTCC AAGG                 CTTGTCTACAAAATA  44 82
 CX649_11145 NONE
 CX649_11140 2284625 .. 2284653 -  -8.9  -4.28656   ATTGAATACGCAAAA        CAGGGATCAGA ATGACTG TCTGAACCCTG        TTTTGAAATAGACTA  89 79
 CX649_11135 2282655 .. 2282689 -  -9.3  -2.71712   CCTGCCTTTCCAAAG    CG-CTAATGCCGCAGC AATG GCTGCGGCACTCGTCA     ACATCATTTTTGGTT  72 29
 CX649_11130 NONE
 CX649_11125 2280357 .. 2280377 -  -9.7  -3.32756   AGTGCAAAGGAAAAG            GGATGGAGA ATT CCCCCATCC            TATCCTTGATATAGC  79 25
 CX649_11120 NONE
 CX649_11115 2277772 .. 2277800 - -12.6  -5.08824   CCTTTACTGAAAAAA        GTCAAAGTCAAG ACATG CCTGACTTTGAC        TTATCCATTTTCAGA 100 51
 CX649_11110 NONE
 CX649_11105 NONE
 CX649_11100 NONE
 CX649_11095 NONE
        deoC 2272678 .. 2272697 -   -10  -4.89054   TGGATAAAAAAATAA            TCCCGCAA CAAA CTGCGGGA             AAACTTTTTTAAACT 100 79
 CX649_11080 NONE
 CX649_11075 2270709 .. 2270735 - -10.9   -4.4874   TGCAAAAACTTAAAA         GCTTGCCGC ACATAGAAA GCGGCAAGC         TTTTTACTCGAATTA 100 38
 CX649_11065 2268433 .. 2268463 - -13.4  -2.71269   AATTTTCAAACTAAT       GCTCCTAGAAGC TTTAATG GCTTCCAGGAGC       TATTCATTCATTAAA  89 25
 CX649_11055 NONE
 CX649_11050 NONE
 CX649_11045 2263475 .. 2263511 -  -9.6  -4.30995   TTGCCCATAAAAGAA   CCCCCTTCATC-CTCAT ATTT ATGAGAGACAAAAGGGG    ATTAACACCATTAAT 100 45
        yqfC NONE
        yqfD NONE
 CX649_11030 2260989 .. 2261013 -  -8.5  -5.09225   ATTCTATGCAAAAAA          TGACCCGGTCA TGA TGAGCGGGTCT          TACTGATCATCTTTT  95 25
 CX649_11025 NONE
 CX649_11020 NONE
 CX649_11015 NONE
 CX649_11010 NONE
 CX649_11005 NONE
 CX649_11000 NONE
 CX649_10995 2255240 .. 2255273 - -19.1  -5.62288   CGAACAAAATAAAAA     CCGTCCCTAATGCAAC AAA GTTGCA-TAGGGACGG     GATGACCCGCGGTTC 100 305
        glyQ NONE
 CX649_10985 2252213 .. 2252237 - -15.9   -3.9941   GGGCGCACAAGGAAA          GACGATTATCC TCG GGATAATCGTC          CATTTGCATTTATTT 100 35
 CX649_10975 2250480 .. 2250493 -  -5.9  -5.39721   TGATCATACAAAAAA               CGGCA TGTT CGCCG                CTTCATCTTCTAAAA  86 28
 CX649_10970 2247582 .. 2247610 - -12.6  -3.78934   CCGGGCGCACAAGAA        TAAAGCAGCAGA ACAAG TCTGCCGCTTTA        TTATAATCCACATTT  95 26
 CX649_10960 2245976 .. 2245989 -  -5.9  -5.39721   TGATCATACAAAAAA               CGGCA TGTT CGCCG                CTTCATCTTCTAAAA  86 28
 CX649_10955 2243078 .. 2243106 - -12.6  -3.78934   CCGGGCGCACAAGAA        TAAAGCAGCAGA ACAAG TCTGCCGCTTTA        TTATAATCCACATTT  95 26
 CX649_10950 2241355 .. 2241366 -  -4.4  -2.82466   CAAAAAGATACATTA                TGCT CAAA AGCA                 CGTACTCCACAAAAA  48 137
 CX649_10935 2239267 .. 2239290 -  -6.1   -5.1675   TCATGTATTAAAAAA          GAATGTCCA GTATTA TGAACATTC           TACCATAAGATTCTT  83 111
        aroQ NONE
 CX649_10925 NONE
         efp 2237049 .. 2237077 -  -9.6  -4.79949   TTTTCAAAAAAATAA        CCCACAGAAATC AGTTA GAATTCTGCGGG        TCTTTTCGTTTTCTC 100 72
    spoIIIAA NONE
 CX649_10910 NONE
    spoIIIAC NONE
    spoIIIAD NONE
    spoIIIAE NONE
    spoIIIAF 2232661 .. 2232680 -  -2.8  -2.78596   GATTTTTTGAGCATA            TCTCGTCC GGGA AGAAGAGA             GGCTAGTCGCTGCAA  42 54
    spoIIIAG 2232025 .. 2232071 -  -4.6  -4.12267   AGCACAACAACTAAA CTTAACATGGTTAATAACCAAA CAG TTTGCTTTTTTAACATGTCAAG CATCCTCCTTTACTT  62 35
 CX649_10880 2231419 .. 2231438 -  -9.3  -5.21709   CTTCACATGAAAAAA            TCCCCGA TTTTTT TCGGGGA             GTCATGTTACTTTGC 100 32
        accB NONE
        accC NONE
 CX649_10865 2228969 .. 2228986 -  -6.9  -5.64421   ATTTTAAACAAAAAA             GGGGAGG ATAT CCTCCGC              CTTTACATTTCCTCT  93 28
 CX649_10860 NONE
 CX649_10855 NONE
 CX649_10850 NONE
 CX649_10845 NONE
 CX649_10840 2224628 .. 2224660 -  -6.5  -3.51365   TCATATGTCACATAA      GAAACTCTTTCAT TGGCCAT ATGAAAAAGTTCC      TTGTTTCCATAATCC  62 449
 CX649_10835 2223685 .. 2223699 -  -6.4  -3.24924   TTTCGATGGACAATA               GATCCA AAA CGGATC               ACTCACTTTCGCTTT  61 28
 CX649_10830 NONE
 CX649_10825 2220945 .. 2220972 -  -6.4   -4.9792   TATCTCATAGAAAAA        CAGGAATAAC TTGTATTC GTTATCCCTG         TCTCTTTATTTTTAA  83 17
 CX649_10820 NONE
        recN 2218688 .. 2218698 -    -4  -3.53761   TAACTTTTTCTTAAA                 GAAA TTA TTTC                 CGCTAGGAGGATTTC  52 28
      spoIVB 2217287 .. 2217304 -    -7  -5.30348   ATGTAATAAGAAAAA             GCGAGT GTGTTA ACTCGC              TTTTTGCTGCTTTTC  89 17
       spo0A 2216085 .. 2216111 - -10.2  -5.60993   GTTTTCAGAAAAAAA         GTAACCGCCG TTAGGCT CAGCGGTTAC         TTTTTTTTCAGGAGG 100 33
        lpdA NONE
 CX649_10790 NONE
 CX649_10785 NONE
 CX649_10780 2210922 .. 2210934 -  -3.5  -2.71263   AATTTTGCTTAAGCA                TTATT TCT AATAA                CTCAAAGGACTAATA  43 35
 CX649_10775 2210356 .. 2210380 -  -2.8  -5.63517   TTTCGAAATAAAAAA         GGC-GCCACAT CTAA AAATGGCAGCC          TTTTCTTTTTATACT  80 34
 CX649_10770 NONE
 CX649_10765 2207357 .. 2207385 - -10.3  -4.39002   TATCAATAAAAAAGA        TGCTCTTCCAACA CGA CGCTGGAAGAGCG        GAACGGCTGTCAATA 100 181
 CX649_10755 NONE
 CX649_10750 2200092 .. 2200134 - -14.3  -4.35747   TAAAAATAAAGGAAA GGGGGTGTCTAATAAGTCGT TTTT ACGGCTTATT-GACGCCCCC ATTAATGTTTTAGAA 100 124
 CX649_10745 2198753 .. 2198765 -  -2.7   -3.7175   AAAAACTTATTTAAA                GAAAA AAT CTTTC                CCGAAGCTCGAGCCG  51 4
 CX649_10740 2197192 .. 2197211 - -12.2  -4.98531   TGGCGAAATGAAAAA            GCATCGGT TAAA ACCGATGC             TTTTTATCGTTATTT 100 35
 CX649_10735 NONE
 CX649_10730 2194573 .. 2194589 -  -5.1  -3.17723   TGATTCTTAATTGAA              GCTGACT GCA AGCCAAC              GCGACCGCTGTCTTC  54 215
 CX649_10725 2193615 .. 2193633 -  -8.8  -3.10579   TCCCGAAAACAATTA             GGGCTGCA ACG TTCAGCCC             TTTTGAAGCTGTCGA  71 202
         shc 2189805 .. 2189818 -  -3.9  -3.25946   TTAGCTCAAATAAAT               TGTAA CCGT TTACA                GTTAATCCGATTAAA  49 330
 CX649_10705 NONE
 CX649_10700 NONE
 CX649_10695 2186054 .. 2186087 -  -9.7   -5.4477   AAAGTGCTAAAAAAA     GATCACCCCTCCT GCACGTAT AGGAGAAGTGATC      GAATTTATCATTTAT 100 33
        xylF 2184748 .. 2184774 - -10.3  -4.12397   TGATAGAATGAGAAA        GGTCTGACTCTT TTGT AAGAGTCAG-CC         TTTATAACATTTAAT 100 36
 CX649_10685 NONE
 CX649_10680 2181948 .. 2181998 -  -8.7   -3.1994   TACATTATTTACCAA TACAAATAGGACTGAAACTATGAAT GAT ATCCAAAGTT-CAGCCCT-TTTGTA GCAGATTTTTAACTA  73 42
 CX649_10670 2180853 .. 2180863 -  -8.2  -5.69068   TAAAAACAGAAAAAA                 GGGC TGA GCCC                 AAGGTCGATTCAATC  93 82
 CX649_10660 NONE
        scpB 2178602 .. 2178623 - -10.9  -4.72696   GTGAAATAAAAATAA           GTCTCAGAC TGCC GCCTGAGAC            GACTTACAAGTTATT 100 29
 CX649_10650 NONE
 CX649_10645 NONE
 CX649_10640 2176235 .. 2176256 -  -5.9  -5.63517   TTTGCAAATAAAAAA           GCTAAGCTC ATTA AAGCTTAAC            CGAAAAGGAGCGTAA  88 21
 CX649_10635 2175391 .. 2175427 - -11.7  -3.85698   TTTTGTCGGTATAAA    TGCGAAAGCTTAACCGA TTT TAGGCTAAACTCTCGCA    TGCTTGCCGTGCTGG  90 13
 CX649_10630 2174701 .. 2174711 -    -4  -2.64243   TCACATTTCACATGA                 TTCA TGT TGAA                 AACTCCCTAACTATG  45 36
 CX649_10625 NONE
        ccsB NONE
 CX649_10615 NONE
 CX649_10610 NONE
 CX649_10605 2168636 .. 2168655 -    -5  -5.26158   CAAACAAAAAAGAAA            GGGTCT TATAAAAG AGACCC             TCGGTGTCAATTTTT  80 32
 CX649_10600 NONE
 CX649_10595 2166762 .. 2166777 -  -6.8  -4.31412   AAAGACCGATGAAAA              GCCCCA TAAT TAGGGC               AATACCCAGCCTCCG  74 140
 CX649_10580 2163302 .. 2163331 - -12.2  -4.20868   GCTTTAAAAGAACAA       CCCCCACGGAAA AACGAA TTTCTGTGGGGG        TTTTGTGTATCATAA 100 105
 CX649_10570 NONE
 CX649_10565 NONE
 CX649_10560 NONE
 CX649_10555 NONE
 CX649_10550 2158315 .. 2158336 -    -3  -3.01712   CTCCTGCCGTCAATA           CATCATAC GATATT GTATGTTG            ATTCTAAAAGATGGT  45 111
 CX649_10545 2157671 .. 2157708 - -15.8  -5.47821   ATCTACGCAAAAAAA   GCTGATAAAACATCGC TGAAAG GCGATGTTTTGTCAGC    CTCAGGAAAAATAGT 100 27
 CX649_10540 2156172 .. 2156197 -  -6.9  -5.54907   GTGACAAAAGAAAAA         CTTCCCCTACA TTAT CATAGGGGAAA          CTGCAAAACGATGCA  93 45
 CX649_10535 2155103 .. 2155139 - -18.4  -4.85545   ATGAAAGCAACAAAA    TCAAGTAGAGAAAAAC GGATT GTTTTTCTCTACTTGA    TTATTTTCGGGACAT 100 44
 CX649_10525 2153018 .. 2153031 -  -9.5   -5.9218   TATACAACAAAAAAA               CCGGC TCAT GCCGG                TTCAAAAATTTTTTT 100 39
        sleB NONE
        ypeB NONE
 CX649_10510 2149649 .. 2149663 -  -7.1  -5.08878   AATACAGAAAGAAAA               GCAGG GGTTT CCTGC               TCTTTTAGCGGCTGA  88 260
 CX649_10505 NONE
 CX649_10500 2148250 .. 2148262 -  -2.7  -2.60212   TTAGTATGTCACAAG                CTACT CTA AATAG                AATGAAAAATACCTC  41 92
 CX649_10495 2146928 .. 2146972 - -11.6  -3.17598   ACCCTCATAAAACGA CTAAACGGCCTCAGCCCTAT GGAAT ATAGAGATAAAGCCGCTTAG ATCATTTTTTATTCC  87 86
 CX649_10490 NONE
 CX649_10485 NONE
 CX649_10480 2144382 .. 2144392 -  -2.4  -3.69621   ATGTATAATGTTAAA                 GGGG CTA CGCC                 TTCAAGAAATCGCAG  47 145
 CX649_10475 NONE
 CX649_10470 2141907 .. 2141917 -    -4  -3.48276   TTGTTTTCCATATAA                 GAAT CGA ATTC                 AAAAAAAAACTGAAG  51 56
 CX649_10465 NONE
 CX649_10460 2140855 .. 2140893 - -10.6  -5.26119   CTTCCAAAAAGAAAA   GAACCTTTCTCTTAAA TTGTATT CTTAAGAAAAAGGTTC   ATGACTTATTTTATT 100 31
      spoIVA 2139211 .. 2139230 -  -6.4  -5.40072   CCCTTGTGAAAAAAA            CAACGGCC AAAA AACCGTTG             TTTTTGACCTTTTGA  87 45
 CX649_10450 2137418 .. 2137436 - -10.3  -5.97575   AATTTATAAAAAAAA             TGGGGTG AATCG CACCCCA             TTTTTTAACATTATA 100 36
 CX649_10430 2133415 .. 2133427 -  -7.7  -3.54935   CAAATTGGTTGCAAA                GGATG ATT CATCC                TTATGAGAGAAGAAT  71 180
 CX649_10425 2132881 .. 2132895 -  -8.5  -4.49756   GCCTAAATAGGAAAA               GCCCC AAAAA GGGGC               TTATTCTGTGAAGAA  89 96
        folE NONE
 CX649_10415 2131914 .. 2131926 -  -5.5  -4.77757   GTCGAAAAAGTAAAA                GCAGA AAT CCTGC                TTATTTTCTCTCGCC  74 26
 CX649_10410 NONE
 CX649_10405 NONE
        hepT NONE
 CX649_10395 2128779 .. 2128806 - -15.8  -4.47551   ATGTAATGTAGAAAA        CCCTAATCAAAC CATT GTTTGATTAGGG         TCAGATGTTAATAGA 100 33
 CX649_10385 NONE
 CX649_10380 NONE
        aroH 2125077 .. 2125103 - -14.6  -5.21236   AATTGATAATAAAAA         TGCCCAAAAACA TTA CGTTTTTGGGCA         GTCGATCAATCTATC 100 157
 CX649_10370 NONE
        trpD NONE
 CX649_10360 NONE
 CX649_10355 NONE
        trpB NONE
 CX649_10345 NONE
 CX649_10340 2117971 .. 2117988 -  -9.9  -5.40072   TTTTTGGTAAAAAAA             GAGGTGA GCAT TCACCTC              TTTTAGGAAAGTAGT 100 28
 CX649_10335 2116845 .. 2116855 -    -4  -2.89267   CCCAACTACAGTATA                 TATG TTT CATA                 ATTCGTGTAGCGATC  46 5
        aroA 2115510 .. 2115530 -  -9.8  -5.02201   AAAATATGACAAAAA            CCATCTGA CAAAC TCAGATGG            TTTTGGAAAGCAAAT 100 18
 CX649_10325 NONE
 CX649_10320 2113213 .. 2113232 -  -2.9  -4.75174   CATCTAATTCAAAAA            TTCAACA TAGTTG CGTTGAA             TTCCTTCCAATTCCG  63 42
 CX649_10315 2112615 .. 2112633 -  -5.3  -5.85244   AAGCAAAATAAAAAA             GCAATGC TGTGC ACATTGC             CTAACATCCTAAATT  91 26
 CX649_10310 2111993 .. 2112005 -  -7.7  -2.53876   CTCTATCTCAAGCTA                GTCCA TAA TGGAC                ATATACAGAAACATA  63 127
 CX649_10305 NONE
 CX649_10300 NONE
 CX649_10295 2109880 .. 2109914 -   -16  -5.64304   TAAGACAATAAAAAA     GCTTGTAGAGAAAAAA TCT TCCTTTCTCTACAAGC     TATACAGACAAACAC 100 55
 CX649_10290 2107562 .. 2107579 -  -2.6  -3.91858   CACACAGCCTATAAA             GGTGAG CGACTT CTCGCC              AATTTACGTTAAAAA  53 67
 CX649_10285 2106583 .. 2106595 -  -7.7  -2.64298   CTACCAAAAAAGGAG                CACCT TTA AGGTG                AAGTCTACCACACCT  63 325
 CX649_10275 2105658 .. 2105670 -  -2.7  -3.28712   TTGTCCCCCCTATAA                CTACT AGT AATAG                TTATTCAAGAGTGGA  45 60
        ypjB 2104813 .. 2104856 - -11.9  -4.45168   TTTCTAAAACATAAA GGGGGCTGTC-AATAAGCCA AAAAA CGACTTATTAGACAGCCCCG CACTCTAGTTCTCTT 100 30
 CX649_10260 NONE
 CX649_10255 NONE
        mgsA NONE
        bshA NONE
 CX649_10240 NONE
 CX649_10235 2098568 .. 2098590 - -10.7  -5.54894   AACCGATTAAAAAAA           CCTTCTTTC ACTGA GAAAGAAGG           ATTTTTACCATTTCC 100 194
        panB NONE
 CX649_10225 NONE
        panD NONE
 CX649_10215 2096185 .. 2096205 -  -4.1  -5.35224   TTTACAAAAACAAAA            TTTGTAATT CAT ACTTACAAA            GCATCCAGGAAACAA  79 19
 CX649_10210 NONE
 CX649_10205 NONE
 CX649_10200 2094237 .. 2094254 -  -6.9  -4.72386   GAAACCAGCGAAAAA             GCCGGCA GAAC CACCGGC              TATTGACAATCTTTA  83 38
        asnC 2092815 .. 2092842 -  -8.5  -4.58395   TGCATGGCTGAAAAA        CGAAACCTCCT GAAGAT AGGAGGCTTCA         TGCAGTTTACGGATA  89 32
 CX649_10190 NONE
         nth NONE
 CX649_10180 2090822 .. 2090865 - -18.5  -3.65606   TTATAAAAAAAATGA GAGGGC-TCGAAAAATTCAG TTACC CTGAATTTTTCGAAGCCCCC TTTTGTTTTGCTTTT 100 1
 CX649_10165 2086392 .. 2086414 - -13.5  -4.65895   CCCTCTACTTAAAAA           TGGTCAGGC TCATT GCCTGACCA           TTATTGTAAGTATTG 100 26
 CX649_10160 NONE
 CX649_10155 2085427 .. 2085451 - -12.2  -4.42974   TTCACACATAATAAA          GCGGAGAAAC TGCTC GCTTCTCCGC          TTCCCCATTTTTATT 100 36
 CX649_10145 2084265 .. 2084301 - -12.4  -4.98672   TCGAAAAATATAAAA    GCAAGTGGAGAGAAAC GCGTT GTTTCTCTCTGCTTGC    TTCCTTTTAGGGACT 100 283
 CX649_10135 NONE
 CX649_10130 2079563 .. 2079580 -  -2.7   -4.9792   TATTTGACAGAAAAA             GCATC TAATAGGC GATGC              CGTTTTTTCTCGTAT  66 123
        ctaG 2078180 .. 2078200 -    -9  -4.58283   TAACTGTTTGAAAAA            CTGCAGGC AAATA ACCTGCAG            TTTTTTTATTTATTT  89 31
 CX649_10115 NONE
 CX649_10110 2076081 .. 2076103 -  -5.5   -5.1417   TGATAAAATGAAAAA           GCGAGCC TCTTCATTT GGCCCGC           TTTGCAATAAAATTT  79 13
 CX649_10105 NONE
 CX649_10100 2075285 .. 2075298 -  -8.1  -5.93252   CTTAAAAATAAAAAA               GACGC TGAC GCGTC                ATTCAAAAATTCGGA 100 119
 CX649_10095 NONE
 CX649_10090 NONE
 CX649_10085 2073942 .. 2073970 - -12.5  -2.52623   CCTTCTTTACAATAG        TAGGACAGCCTAA ATT CTCGGCTGTCCTA        TTTATAATCCAATTT  86 27
 CX649_10075 NONE
        rsmD 2072599 .. 2072609 -    -4  -2.62613   TCCGACTTCAAACAT                 TTTG ATA CAAA                 GATACACTTGTTATA  45 7
 CX649_10065 2072040 .. 2072066 -   -11  -4.90381   TGGAACATAAGAAAA         GGTTCGGAAA CCAAAAT TTTCCGAACC         TCAAAAAATTATTTT 100 34
 CX649_10055 NONE
 CX649_10050 2068416 .. 2068430 -  -2.2  -3.06073   TATATTGTCCAAAAC               TTTAAC AGA ATTAAA               AGAAATATATGAAAT  42 449
 CX649_10040 NONE
        rpmF 2066698 .. 2066732 - -15.1  -3.41587   TTTCACAAAATGTAA     CGGCCTTTCCCCGAC TGAAT ATCGAGAAAAGGCCG     CAGCTAAATTGTCTA 100 66
 CX649_10025 2065276 .. 2065332 -  -9.6  -4.09739   TCAACGTTTCTAAAA CATTCATGGGGGCGTC-AATAAGCCAT AAAA ACGACTTATTAGACACCCCCTTCAAAG TCAGAAGTCGATAGT  93 95
 CX649_10015 NONE
 CX649_10010 2063241 .. 2063253 -  -4.9   -3.6106   TGTAATATTTTTAAA                CAAAA AAA TTTTG                CTTTTATTTATTCAC  57 37
        bshC 2061509 .. 2061525 -  -5.1  -6.30182   GGACATAAAAAAAAA              CCCTGTA TGA CACAGGA              TTTTTCAAAAAATAG  95 43
 CX649_10000 NONE
 CX649_09995 NONE
        ftsL NONE
 CX649_09985 2057387 .. 2057401 -  -5.7  -3.97043   TTTAATATAGAACAA               GCTTC AAGCG GAAGC               AGGCGCCCGCTTGCC  63 90
 CX649_09980 2055335 .. 2055367 -  -7.9  -3.42124   TAAAATGAGCGACAA      GGGCTTTTCAAAA GCAGTTG TTTCAAAAAGCCC      TTTTTTAGAAAATTA  69 38
 CX649_09975 NONE
 CX649_09970 NONE
 CX649_09965 NONE
 CX649_09960 2050137 .. 2050147 -  -2.6   -2.9665   TGAAATGTTAGAAAC                 TTTT TAT AAAA                 CAGTTAAAAGAGGCT  43 95
        murG NONE
 CX649_09950 2047992 .. 2048007 -  -6.1  -5.12707   TTAAAGGTGAAAAAA              CGGCA ATAGCA TGCCG               TTTTAAAAAAATCTT  83 91
 CX649_09945 NONE
 CX649_09940 NONE
 CX649_09935 NONE
 CX649_09930 2045245 .. 2045255 -    -4  -2.75343   TGTATATGTGTAAAT                 TCAA CAC TTGA                 TCTATTTTCCCTTTT  45 39
        ftsA 2043832 .. 2043846 -  -2.9  -2.52543   ATCCTCCCTAATCCA               TCAAT GCTCT ATTGA               CGAAATTTATTCGAA  41 32
 CX649_09920 2042644 .. 2042672 - -11.1  -5.45652   AGCTTTAAGAAAAAA        GCATGGATGAC GTCTATT GTCACCCATGC        TTTTTTTAGCGGCGC 100 31
     spoIIGA NONE
        sigE 2040172 .. 2040188 -  -4.4  -2.78712   GTCTTAAGTTAAGTA              TCTCCC TGAAG GGGAAA              AATATGCACAAGCTT  48 96
        sigG 2039320 .. 2039345 - -17.7  -4.02022   TTGAATGATGATAAA         GGGCCACATTC AAAA GAATGTGGCCC          AATGATTATTGAATA 100 31
 CX649_09900 NONE
 CX649_09895 NONE
 CX649_09890 NONE
 CX649_09885 NONE
 CX649_09880 2036615 .. 2036652 - -12.1  -3.78877   TATGATATGAAAAGA   GCCGATTGGCATACAAA ACAA TTCGAATGTCAATCGGC    GAATGAATTTTATGA  91 35
 CX649_09875 2035749 .. 2035759 -  -2.6  -2.78032   TTTTTCGCAAAACAC                 TAAT CCA ATTA                 TAAACGATTTTTCGA  42 73
 CX649_09870 2034916 .. 2034940 - -16.5  -6.11229   ACTAAAATAAAAAAA          CTCCTCATCCC TAA GGGACGAGGAG          GAATCTCGCGGTACC 100 287
 CX649_09865 2032070 .. 2032089 - -12.2  -5.37593   TGCTAAATGAAAAAA            CTCCCTGT TTGC ACAGGGAG             CTGATAAAACTAAGC 100 35
 CX649_09860 2031484 .. 2031498 -  -4.3  -5.37865   GGAACAAGCAAAAAA               GTGAA GCTTG TTCAC               TTCACTTCTTAATGA  79 34
 CX649_09855 NONE
 CX649_09850 2029885 .. 2029907 - -16.4  -5.40072   TTTCGGTTAAAAAAA           CCTCTCATCC TGA GGATGAGAGG           TTTTGTGCATAGCTC 100 136
 CX649_09845 2029200 .. 2029227 - -10.7  -5.52384   GGCGCACCAAAAAAA        CCTCTTTG-GCC GATGA GGCACAAAGAGG        TTTTGCCAAAGTGCA 100 107
 CX649_09840 2027338 .. 2027352 -  -7.2  -2.65112   AATTCATGGATATTA               TAGGTA TTT TACCTA               ATAAATGGATGTTTG  61 320
 CX649_09835 2025590 .. 2025614 -  -6.4  -5.81032   GAATTTTAAAAAAAA          TACCCTGCCA AGGCA TGACAGGGTG          TAAGCAAATGGCGAA  95 99
 CX649_09830 NONE
 CX649_09825 NONE
 CX649_09820 NONE
 CX649_09815 NONE
 CX649_09810 2018280 .. 2018302 -    -2  -2.77791   TTTAACTCAAGACCA           GGAAGCTTAA CAG TTAACATTCC           AACATCACCTCCCCG  41 16
 CX649_09805 NONE
 CX649_09800 NONE
 CX649_09795 2015839 .. 2015863 -  -2.8  -4.27686   TAAAAGGATTGAAAA         CCGCC-TCTAG TCGT CTAGTCAGCGG          TTTATTGAGACAGCT  58 209
 CX649_09790 2015000 .. 2015015 - -10.4  -2.78463   AGTTCCTGTACGACA              GGCAGC ACCC GCTGCC               GCCGCACCGCTTCCT  79 72
         sat NONE
        cysC NONE
 CX649_09775 NONE
 CX649_09770 NONE
        cobA NONE
 CX649_09760 2009014 .. 2009038 -  -6.5  -5.05601   CAGTACAGAGAAAAA          GGAAACCAT TCATAAC ACGGTTTCC          TTTTTCAAATATTTA  84 10
 CX649_09750 2004317 .. 2004340 -  -3.9  -5.36181   AAAGAAAAAAAGAAA          GGTCATAGA ATAGCA TCTATCACC           TGAAAAAATTATAAC  76 46
 CX649_09745 NONE
 CX649_09740 NONE
 CX649_09735 2002454 .. 2002472 -  -3.2    -3.406   TTAATAGGGAATCAA             TTGATG GATAAAG CATCAA             GACTCAACCTCCAAA  48 22
 CX649_09730 2002232 .. 2002256 - -10.2  -5.40474   AGCTTTTTAAAAAAA          TAACAACCTA TCAAG TAGGTTGTTA          TGACAGCAGCTATTA 100 38
       coaBC NONE
 CX649_09720 NONE
 CX649_09715 NONE
 CX649_09710 NONE
 CX649_09705 NONE
 CX649_09700 NONE
 CX649_09695 1992395 .. 1992410 -  -3.2   -2.7782   TAACGCTTTAACAAT              TTTGCC TTTT GGCATA               CATGACCTCCTTTTT  44 43
        rsgA NONE
 CX649_09685 1990845 .. 1990879 -  -8.8  -3.53091   ATTTTTTCCTTTAAA    TGTGAAAAGAACCGC ATATAA ACGGTTCTT-TCACA     TTCCTCTTATAGATT  77 21
 CX649_09680 1990554 .. 1990569 -    -9   -4.1021   GTCTACAAGCAGAAA              GCACCT TGAT AGGTGC               TTCTTTAATCTTTCT  85 30
 CX649_09670 NONE
 CX649_09665 1987396 .. 1987413 -  -9.1  -4.27026   CGTGAAATAAAAAGA             GGAAGGC CGAA GCCCTCC              TGCTCTACTCAACTG  89 30
 CX649_09660 NONE
 CX649_09655 NONE
 CX649_09650 NONE
        fabD NONE
 CX649_09640 1981836 .. 1981849 -  -5.3  -2.82516   CCCTCCAGTATTATA               GAAGA TTTG TCTTC                ATATTACTACAACGA  52 49
 CX649_09635 1981539 .. 1981558 -  -7.8  -4.06781   ATGAAAAGGGAGAAA            GCCCCGCA AAGA TACGGGAC             TTTTTAAAAACATGC  76 43
 CX649_09630 1980714 .. 1980735 -  -4.4  -5.54885   AATATCAATAAAAAA           TCCCCC GTTTATTTTT GGGGGA            ATTCGCCTAATTTTT  82 12
         smc NONE
 CX649_09620 1975976 .. 1975990 -  -4.3  -2.54098   TTTTTCAAGCAACAT               CAACA CCCCC TGTTG               TTAAGTGAATTGCCT  47 105
 CX649_09615 1975627 .. 1975637 -  -4.6  -4.11484   GCTAATCCCTCAAAA                 GCCA TGG CGGC                 TCCTCCTAATCCAGT  62 31
 CX649_09610 1974286 .. 1974300 -  -4.4  -3.26921   CTTAACAGAATAAAT               TTTTAT TAC ATAAAA               GGAAATTTAAATCCT  51 16
 CX649_09605 NONE
 CX649_09600 1973655 .. 1973676 - -10.1  -5.00616   TTCTTTTGTAAAAAA           GGCGAGGAG CAAT CCCCTCACC            TTTTAATCATTAATT 100 28
 CX649_09595 NONE
 CX649_09590 NONE
 CX649_09585 NONE
        trmD 1971786 .. 1971807 -  -3.8  -4.57837   ACATCGTTTTAAAAA           GACA-AGAC CGGCT GTCTATGTC           ACAAAACGTATCTTA  65 69
 CX649_09575 1971340 .. 1971362 - -12.8  -4.50976   GCTCACATGACAAAA           GGGCCTGTAT TGA ATACAAGCCC           TTTTTATGTTCGAAT 100 43
        lepB NONE
 CX649_09565 1969729 .. 1969755 -  -7.3  -5.26119   TTGTTAAAAATAAAA         TATAGACACGC GGAAT GCGTGCCTTTA         TTCATTTGGCCGGTC  89 23
 CX649_09560 NONE
 CX649_09555 NONE
 CX649_09550 NONE
 CX649_09545 NONE
 CX649_09540 NONE
        dprA NONE
 CX649_09530 1961527 .. 1961548 -  -7.3  -3.72324   TATCTCCATGAAGAA           GGTGAGC TTTACATT GCTCACC            AAAGAGAAGATATTT  70 42
       trmFO 1960093 .. 1960126 -  -6.1  -3.90318   TTAGCACCTCACAAA     GGGCTACTA-AATCGT ATC ACATTTGCAGTAGCCC     TTTCAATCCATTTTA  67 38
        xerC NONE
 CX649_09515 NONE
 CX649_09510 NONE
 CX649_09505 1956330 .. 1956369 - -13.1  -4.92363   AAACATTTATAAAAA  GCTGCTTCAAAAGGTTTG ATAAA CAAACCTTTAG-AGCAGC  TTTCTTTTAATGGTT 100 32
 CX649_09500 NONE
        flgC NONE
 CX649_09490 NONE
 CX649_09485 NONE
 CX649_09480 NONE
 CX649_09475 NONE
        fliI NONE
        fliJ 1949713 .. 1949723 -    -4  -3.06302   ATCATTTCCACCTAA                 TTTC TAT GAAA                 CGAATATGTAATGAT  47 11
 CX649_09460 NONE
 CX649_09455 NONE
 CX649_09450 NONE
 CX649_09445 NONE
 CX649_09440 NONE
 CX649_09435 NONE
 CX649_09430 NONE
 CX649_09425 NONE
 CX649_09420 1942570 .. 1942582 -  -4.1  -3.19271   CACAAATATGTAATA                CATCG TTT CAATG                CAAATGCTCCTTATC  51 36
 CX649_09415 NONE
        fliP NONE
        fliQ 1940989 .. 1941010 -  -3.7  -3.10894   AGCATCATCATTCAA           CTCATCCAA CAAA TTGATTGAG            ATTGCTGAAAATATT  47 5
 CX649_09400 NONE
        flhB NONE
        flhA NONE
        flhF NONE
 CX649_09380 NONE
 CX649_09375 NONE
 CX649_09370 1931961 .. 1931978 -  -4.2  -3.14132   TTCCCCTTCCATCAA             GCATTA CTGGAT TAATGC              ATTACAATCAACGAT  50 11
 CX649_09365 NONE
 CX649_09360 NONE
 CX649_09355 NONE
 CX649_09350 NONE
 CX649_09345 NONE
        rpsB 1928146 .. 1928178 -  -8.6  -5.03314   CGTATGCTTAAAAAA      GGTGATAAAAGG CTAAAATCC CCTCTTATCACC      TTTTGTCATTTAGGC  95 35
 CX649_09335 1927187 .. 1927208 - -10.2  -3.90048   GGGTTTTCAAAAAGA           GGGAACAC TCGCTT GTGTTCCC            TTCTTAACATTTTCA  93 47
 CX649_09330 NONE
 CX649_09325 1925784 .. 1925803 -  -4.2   -5.7946   TCTTGAACAAAAAAA            CCCCCTGT GAGA AAAGAGGG             TTTTTAGCACATTTC  91 60
 CX649_09320 NONE
 CX649_09315 NONE
 CX649_09310 NONE
        rseP NONE
 CX649_09300 1919873 .. 1919921 -  -7.6  -3.45031   TTCCCAAAAAGTTAA TAGGGGG-CTTGACCCGTTTGACA AAT TATCATAAAGG-CAAGACCCCCTA CTCTTTACCTATGCC  69 67
        polC 1915422 .. 1915442 -  -8.3  -3.92592   AGTTCCAATAGGAAA            GAGTGGG TTTTTTC CCCACTC            TTTCGTTAGGCTTTT  79 102
 CX649_09290 NONE
        nusA NONE
 CX649_09280 NONE
 CX649_09275 1913142 .. 1913155 -  -3.1  -2.75712   GTAGTTATTCAAGTA               GAAGC TTCA ACTTC                TTGGCAAAACCTTCT  43 1
 CX649_09270 NONE
 CX649_09265 NONE
 CX649_09260 1910266 .. 1910289 -   -11  -4.68456   ATCATGAAAAAAGAA          CCCGTTACAC AATT GTGAAACGGG           ATGCCTCAGCTTTCA 100 31
 CX649_09255 NONE
 CX649_09250 1908274 .. 1908289 -  -4.8  -2.91032   AGAATAAGAATACTA              TTTTTC CCAA GAAAAA               GCAAGGAGGTTCCAT  51 40
 CX649_09245 1907879 .. 1907894 - -10.4  -5.27399   GAATACAGTAAAAAA              GCGGGA AATC TCCCGC               TTCCATACAACTTAA 100 37
         pnp 1905607 .. 1905629 -  -7.7   -4.4874   CGCAAAAATGGAAAA          GAAGCC-GGG TTTT CCCTGGCTCC           GGTCAAGACTTTTGC  82 28
 CX649_09235 NONE
 CX649_09230 1903279 .. 1903304 -  -4.7  -5.63517   TTGGCAAATAAAAAA         TGCCCGCCA ATCCATCA TAGCAGGCA          TTTTAATTCTGGAAT  86 14
 CX649_09225 1902875 .. 1902893 - -11.7  -5.20328   TGCCAAAAAAATAAA             GCCGGCT TCTTT AGCCGGC             GGATCTTCATTAGTC 100 35
        dpaA NONE
 CX649_09215 NONE
         asd 1900050 .. 1900078 - -12.6  -3.68647   TAAAATAACTAAACA        GAAGAGAGCTGA TGGCT TCAACTCTCTTC        TTTTCACCTTATACT  95 34
 CX649_09205 NONE
 CX649_09200 1897893 .. 1897913 - -10.5  -6.09196   TTTAAAATAAAAAAA            GGCTAATCA CGA TGATCAGCC            TAATTCATGGATCAC 100 20
 CX649_09195 1896039 .. 1896057 -  -7.4  -5.16472   AAAAATGTGAAAAAA             GCAGGC TTCGTCG GCCTGC             TTTTTGTCTAAACCT  88 33
 CX649_09190 1895218 .. 1895230 -  -3.3  -3.20109   TATAAAATCATTGAA                GGATG TCC CCTCC                TTTTCCATTCTTTCT  47 5
 CX649_09185 1894894 .. 1894914 - -12.6  -4.22475   TATGTAAAACAAGAA            CGCAGCCA CTATT TGGCTGCG            AACGACTGTTTGTGT 100 106
 CX649_09180 NONE
 CX649_09175 1892263 .. 1892276 -  -3.1  -2.88427   AAGAGGGTGTAGACA               GTTGC TTTC ACAAC                ATGTCCTATCCATTA  44 84
 CX649_09170 1891983 .. 1892008 - -10.6  -4.72846   CCATATACTTAAAAA         GACAACAGAA AATGAA TTCTGTTGTC          TTTCATCATTATTTT 100 66
 CX649_09165 NONE
 CX649_09160 NONE
        fabG NONE
 CX649_09150 1887939 .. 1887967 -  -9.7  -5.12785   CAAGGAAAAAATAAA       GGGCATCTTGGT CATTTC ACCAAG-TGCCC        TAACTTGACAGTAAT 100 55
 CX649_09145 NONE
 CX649_09140 1886129 .. 1886158 - -10.2  -4.42976   GCATAAAGTAAGAAA       GAATAAGCCATC TCGTAC GATGACTTATTC        ATCCTTGTTATTTAA 100 20
        pgsA NONE
 CX649_09130 1884127 .. 1884139 -    -2  -5.00616   TTCCTCCTTAAAAAA                TTGA TAGCT TCAA                AATAAATATACCGTG  65 128
        recA 1883021 .. 1883046 -  -7.6  -5.52384   TTTTGATCAAAAAAA         TAAGACCGGC TACTTC GCCAGCCTTA          CGCTAAGATGTGCGT  93 44
         rny 1881230 .. 1881259 - -10.9  -6.17292   AAATTGAAAAAAAAA       TAAAGCGGCACAT TTTC ATGTACCACTTTA        TTTGGCATATTCAAC 100 23
 CX649_09115 1880071 .. 1880091 -  -7.5  -3.21551   AAAATCATCCAGTAA            CGCATCATC GGC GATGGCGCG            CAGTTGAAGTTGAGC  67 314
 CX649_09105 1879029 .. 1879058 -  -8.6  -5.27477   ATTTTAAGCAAAAAA       CAGTCTGCAACC GAAAAG GAGTGCAGACTG        TTTAGCTAATTTATT  95 49
 CX649_09100 NONE
 CX649_09095 1875990 .. 1876021 - -12.5  -4.67552   GCCATCAAAAAATAA      TCCTTTCCAACGA TGATTT TCGTTAGAAAGGA       TACCATGTTTTTGGC 100 92
 CX649_09090 1874496 .. 1874506 -  -3.2  -4.71186   AGGATGAAGAGAAAA                 CCAA ATG CTGG                 GCATGGGGGTGTCTA  65 170
 CX649_09070 1871894 .. 1871908 -  -2.8  -5.06414   TTGTCGTAATAAAAA               GTCCAT ATC ATGGAG               ATTATATACAGTGAC  69 153
 CX649_09065 NONE
 CX649_09060 NONE
 CX649_09055 1863336 .. 1863365 - -12.3  -4.17048   GTTGTTCGAAAAGAA       GGCATCTAGATAC GTGA GTATCTAGATGCT        ACATTTTCTGCTCAA 100 24
 CX649_09050 NONE
 CX649_09045 NONE
 CX649_09040 1858104 .. 1858141 -   -15  -4.87893   AACTGTAAGCAAAAA   CAGCCATCCCCATGAA TATTTC TTTACGGGGATGGCTG    TGAAGTTTCAAGCAA 100 56
 CX649_09030 NONE
 CX649_09025 1855067 .. 1855077 -  -6.8  -3.39432   AAACGAGTGAACGAA                 CGGT TTA ACCG                 GCTGGAAACAAAATA  62 252
 CX649_09020 NONE
 CX649_09015 1852357 .. 1852383 -  -5.6   -3.9243   TAATCGGGCAAACAA         GCCCGCATCCCG AAG CGGCGCGCGCGC         GTCTTTATACGCCCT  63 450
 CX649_08995 NONE
 CX649_08990 1848901 .. 1848914 -  -8.1  -5.54079   CCAAAAATTAAAAAA               GACGC TGAC GCGTC                TTTAAACAAAATGAG  93 132
 CX649_08985 1848197 .. 1848216 -  -8.6  -5.36441   CTTTGACATAAAAAA            CTAGGAAG CAGC CCTCCTAG             TTTTTCATTATTCTT  95 33
        mutS 1845007 .. 1845025 -  -3.2  -2.62642   ACTAGCATCCATAAG             GATGAT TTTTCCC ATCATC             ATCACCTATTTCAAT  43 31
 CX649_08975 NONE
 CX649_08970 NONE
 CX649_08965 1841657 .. 1841673 - -12.3  -5.14563   CTTCTCATGAAAAAA              CCGGAGA TCA TCTCCGG              TTTTTTCGTCATGCT 100 34
       spoVK 1840333 .. 1840348 - -10.4  -4.04141   CAATAATCAAGCAAA              GCAGCC TAGG GGCTGC               TTATACGTTTAATAT  93 26
        hflX NONE
 CX649_08950 NONE
 CX649_08940 NONE
        glnA 1835140 .. 1835166 -  -7.3  -4.84918   CCCACAAATATAAAA        CCCCTCCAACGC TTGA GCGTCA-AGGGG         TTTCGGGATTAATAT  88 34
 CX649_08930 1834405 .. 1834417 -  -4.8  -2.79501   GAGACGGGCATGATA                GGCT GTTTT AGCC                ATGCGATGTTATCTG  51 382
 CX649_08905 1830500 .. 1830522 -  -7.8   -3.0127   TGATGGAATGATAGA           GGATGTTG ACGGCAA CAACATCC           CGTTGAAGACTGAAA  66 241
 CX649_08890 1827842 .. 1827857 -  -5.4  -4.57474   CTAACGGAGATAAAA              TTCGCC ATAC GGCAAA               TGCAAATGTCATGGC  71 266
 CX649_08860 1824779 .. 1824798 -  -2.9  -2.89202   AAATAGATGAACAAC            TTCTCAA TCGTTT TCGAGAA             TGGCATTAACTTGGT  42 9
 CX649_08855 1824131 .. 1824145 -  -5.7   -3.1531   ACAACGAAAATTACA               TCGGT CTGTC ACCGA               AATGCGCAAATTCAA  55 88
 CX649_08845 NONE
 CX649_08840 NONE
 CX649_08835 NONE
        mobB NONE
 CX649_08825 NONE
        moaD NONE
        moaC 1818789 .. 1818812 -  -3.2  -2.74019   CACAACGCTTAAGCA          GCC-CTTCATC GAT AATGAAGAAGC          TCTTATATGCCGAAT  43 263
 CX649_08810 1818388 .. 1818400 -  -4.9  -4.19238   TTGCGAAGCGGAAAA                TCAAT GTT ATTGA                AAGGAAAACGCCTTT  65 153
 CX649_08800 NONE
 CX649_08795 1816259 .. 1816269 -  -2.6  -3.50393   TTTTAGTTTACATAA                 TATA TAT TATA                 GGAAGTTATAAATGG  47 411
 CX649_08755 1806620 .. 1806647 -  -9.9  -2.67209   TACCAATCGATAGCA        GGATCGGATTC CATTTT GCATCCGATCC         CCTTATTGCTTATTA  75 38
 CX649_08715 1796760 .. 1796784 -    -5  -5.31855   TATCAATAACAAAAA         GAGCCTGGAGA ACTT TCTCG-GGCTC          TTCGTGTTTTTTAGG  80 436
 CX649_08690 1792507 .. 1792546 -    -6  -2.82112   AAAAATATTTAATTA  TTAAAAATCGCCAAGTA TAATAAT TACC-GGCGATTTCTAA  CTTCTATCATAGCTC  56 22
 CX649_08685 1791135 .. 1791159 -   -10  -3.05384   TCCCTCCTTACTCAA          GGGGAATGTG TCATC CTCATTCCCC          TTGAGTAAGCAGTCT  77 285
        modB 1786587 .. 1786611 -  -5.1  -3.99898   TAAGTAAGCGACAAA          TAAGCTCTAAA AAT TTTTGAACTTA          CTATTTTTGTACATG  62 26
 CX649_08655 1785786 .. 1785798 -  -3.5   -5.2015   TGAACAATATAAAAA                TAAAT TTA ATTTA                CTGTTTTTAAGGAAG  71 136
 CX649_08620 NONE
 CX649_08615 1775777 .. 1775826 -   -16  -2.77861   TGAAGGGAAAATGGA GATCCACGTCAAAATCCCAG TATTTTACCT CTGGGACTTTGACGTGGATT TTTTATTTCGGGTGC 100 429
 CX649_08600 1772921 .. 1772953 - -10.8  -4.88405   AAGCTGTAAATAAAA      CTTGTAGAGAAAAA TATTG TCCTTCTCTACAAG      CTCTGTAGCGCTAAT 100 76
 CX649_08580 1768678 .. 1768704 - -13.1  -4.20106   AAATGCTATTTAAAA         CCGCTAACCAA TTTAT TCGGTTAGCGG         CTGCTCCGTTTTATT 100 11
 CX649_08555 1760540 .. 1760576 -  -6.7  -2.91061   TTTCAATAAAAAAGG    GGAGAAAGGATTGTT TTTGCTC AACAAGTCTTTCTCC    TTTTTATTTTTCATT  58 64
 CX649_08535 NONE
        prpD 1752533 .. 1752545 -  -6.3  -3.33151   TGCGCCAAAGTAACA                TGCAT CTG ATGCA                AAACAACGTGTGATC  61 51
        prpB 1751230 .. 1751265 - -10.4  -2.60496   TTTTCCGGTAAATAC    TTTTTCATCCACGGGG CAAA CCCCGTGGATGGTTAA     TCTTCAGGCAATACT  78 22
 CX649_08440 NONE
 CX649_08435 1733969 .. 1733987 -  -4.6  -5.41941   GAAATGAAAGAAAAA             GTGATGAA TCT TTTATCAC             AATTTCCACTGTATG  86 459
 CX649_08415 NONE
 CX649_08410 1730540 .. 1730555 - -10.4   -5.7946   CCGGCAATAAAAAAA              CGCGCT TTTT AGCGCG               TTTTTTAAACGGAGA 100 35
 CX649_08400 1726214 .. 1726242 -   -14  -3.57901   TGGAGTAAAAATACA        GCCTCTAAAGGA ATTAA CCCTTTAGAGGC        TCATTTAATTTGAAA 100 26
 CX649_08390 1723757 .. 1723786 - -10.2  -3.82628   CAGCTTAAATAAACA       GCCATCCCATAAA GCTAT TTTA-GGGATGGC       TCGCTCTTTAGCATA  87 10
 CX649_08375 NONE
        msrA 1720032 .. 1720059 - -10.1  -5.47218   GGCCATTCAAAAAAA        CAGTAAAATCT ATTGTA AGATTTTACTG         TTTCAATCATTTTTA 100 38
 CX649_08365 NONE
 CX649_08360 1717841 .. 1717883 - -16.5  -2.71785   TTCTAAAACATTAAT GGGGGCGTC-AATAAGCCGT AAAA ACGACTTATCAGACACCCCC TTCATCTATTTTTCA 100 46
 CX649_08295 1707757 .. 1707792 -   -15  -6.00086   ATATTACAAAAAAAA    GCCGATTTTCTTTC AAACATGA GAAAGAAAATCGGC     CGTTTTCTTTTATCG 100 35
 CX649_08290 1706122 .. 1706133 -    -3  -3.35088   AAATTCGGGAATGAA                GAAA AGAC TTTC                 TTCCATAAAAAATTT  48 198
 CX649_08275 NONE
 CX649_08270 NONE
 CX649_08265 1699971 .. 1699981 -  -5.4  -4.47328   AAGGCCATTATAAAA                 CTGA TCC TCAG                 TCCTTTTTCTCCTTT  71 507
 CX649_08210 1689739 .. 1689756 -  -8.4  -3.61652   CTCTCAAATAAGTAA             GCGGGT ATCAAA ACCCGC              TTTTGTTTTGTCAAA  73 36
 CX649_08140 1678286 .. 1678303 -  -4.1  -2.61681   CCTCAATTTCAGAAC             GTCGTAT TTTA ATCCGAC              CAGGTTGCTATTATT  47 39
 CX649_08135 1677095 .. 1677115 -  -7.6    -5.626   CATTTTATAAAAAAA            CGAATGTC TTATT GACACTCG            TTTATGAAATATGTT  93 27
 CX649_08130 1676482 .. 1676507 - -13.5  -6.09196   CCGAAAATAAAAAAA         TAAAAAGAGGC AAAA GCCTCTTTTTA          TATTTGAAGATCAAA 100 51
        rnhA 1675000 .. 1675030 -  -3.4  -3.53343   AATGGTTTGTGGAAA      TGTTTTTTGCCGG GAGAAG CCG-CAAAAACCA       AGCTCATCCCTCTGA  50 465
 CX649_08090 1664488 .. 1664540 - -10.8  -3.64488   AACGTTTCTAAAACA TTCATGGGGGCGTC-AATAAGCCGT AAAA ACGACTTATTAGACACCCCAAAAAA TTATTTTACGATTAT  89 26
 CX649_08080 1662024 .. 1662046 -  -8.5  -4.95957   GAAAGCAATGAAAAA           CGCTTAAGC TTCGG ACTTAAGCG           TTTTAATGTCTTTAT  95 37
 CX649_08075 1661235 .. 1661273 -  -4.6  -5.67711   TAAAGAAAATAAAAA  CAGATGTCGGTATGTGC CAGTGC GCAC-CACCTTCATCTG   TTTAACTTTTTTCTG  85 56
 CX649_08060 1658616 .. 1658637 -  -8.7  -4.20783   ATGCCATGTAATAAA           GCCCCTCTA TCAG TAGAGGGGA            CGATCTATGTATCAT  85 87
 CX649_08050 1656609 .. 1656642 - -11.9  -4.64861   TGTTTTCAAAAGAAA     TAATGGTCAGCGATGC AGC GCATC-CTGACCATTT     TTAAACAGTGCTTTT 100 26
 CX649_08040 1653829 .. 1653856 - -10.7  -4.16182   TTATTATAAATTAAA        TACGGTAATGG TTTTAG CCATTACCGCA         GCAAAATTATTTTAT 100 126
 CX649_08035 1652812 .. 1652837 -  -6.9  -3.90112   GTTTTTTTAATGAAA         GACCTTCCCCAC GAA GTAG-GAAGGCC         GTCGTCCATATTTTA  73 42
 CX649_08020 1650840 .. 1650882 - -15.8   -3.6215   GTAATGCAGCCCAAA GGGGCAGTCTAATAAGTCG TTTTTT CGGCTTATT-GACTGCCCC TTTTAATGTTTAATA 100 256
 CX649_07995 1645253 .. 1645276 -  -6.8  -6.11392   AAAGAAACAAAAAAA          GAATTGCCCGA AAA TCGGACAA-TC          ATCAATTAATAGTTT 100 31
 CX649_07990 1644538 .. 1644558 -  -6.9   -5.5112   TTTATGAACAAAAAA            TCCCGAA AGAACTA TTCGGGA            TTTTTTGCATGGATT  93 96
 CX649_07980 1643112 .. 1643122 -    -4  -3.09289   CATTACTCCAATACA                 GAAA AAT TTTC                 GCTTTGTTTTTCAAA  47 2
 CX649_07975 1641358 .. 1641403 - -12.2  -4.64861   TTTTTCCAAAATAAA TCCCTCTTATGTTAAACAGTA TGTTC CACTGTC-AACACAAGAGGGA TCGATCACAAGTTAT 100 44
 CX649_07945 1635743 .. 1635784 -  -5.3   -3.8901   TTCTAAAGCATGAAA GGGGGC-AT-CAATAAGCC AAAAAA GACTCATTGGACAGCCCCC TAAAAGCGTGCAAAT  61 46
 CX649_07940 1634103 .. 1634147 -  -3.1  -4.88288   TAAAAGAACACAAAA GGCGTTTTCTCAGGCTG AAAAGTTGATGGA CAGCC-GA-AAAACGCC TTTTATTATTTCTGC  68 200
 CX649_07930 1631467 .. 1631477 -    -4  -2.78395   AACAAACGTTAAGGA                 TGTA CGA TACA                 GTTTCAGCTAAGTGT  46 92
 CX649_07925 1630573 .. 1630598 - -11.9  -4.55209   CAGAGAGTAAATAAA         CTGGAGCGAAA AAAA TTTCGCTCCTG          ACGTTTCCCCTCATT 100 48
 CX649_07850 1613491 .. 1613535 - -15.2  -3.37493   TTTCTAACACATTAA TGGGGGCGTC-AATAAGCCGT AAAA ACGACTTATTAGACACCCCCT TTTTCGGATTTCAGT 100 36
 CX649_07840 1611503 .. 1611526 -  -8.1  -3.38281   TGATTGAAAATTTAA          GAGGCTTCC TGAATG GGGAGCCTC           TAAATACATGTTCCA  72 142
 CX649_07720 1587066 .. 1587089 -  -4.6  -4.42238   TCATTCTAAGCAAAA          CAGCCTTTTT TAAG AAAATGACTG           TCTTTTGCCTAAAAA  64 276
 CX649_07715 NONE
 CX649_07710 1582518 .. 1582543 - -11.9  -3.69434   CTAACTAACGGTAAA         GGCTGTCGG GAAACAGT CCGACAGCC          TGATTTTCACTTCAC  91 335
 CX649_07635 1567598 .. 1567618 -  -8.3  -3.94438   CATTTTAATAAAATA            GAGAGCC GGAAGTT GGCTCTC            TTTGTATTTTTGATA  79 80
 CX649_07620 1565498 .. 1565513 -  -4.7  -4.79756   GAGACAATTGAAAAA              CAAGC GGAAGA GCTTG               TATTCAAGACGGAAA  72 423
        splB NONE
 CX649_07605 1563440 .. 1563472 - -15.8  -4.65916   GTCAGCTTAACAAAA      TCAGGATCCGAAAA GTCTT CTTTCGGATCCTGA      TTTTTTTCTCCCATG 100 62
 CX649_07580 1558414 .. 1558424 -  -5.4  -2.70404   ACACTATAAGAATAG                 GCAT TGT ATGC                 ATTTAATATTTCGGT  51 65
 CX649_07575 1558091 .. 1558103 -  -3.4  -4.48987   TTTCTACAAGGAAAA                GCAA ATCAA TTGC                TCTATTGTGTACATC  62 39
 CX649_07565 1556155 .. 1556178 -  -6.8  -3.26164   ATAGTACCGACAAGA          TGATAGCAGA ATTT TCTGTTATCA           ATAAAAGAGCATTCC  61 462
 CX649_07525 1548216 .. 1548247 - -12.5  -4.45083   TGTATACGCATAAAA      GAATCCTCAC-CTG ATAAA CAGTGTGAGGATTC      ATGTTTGTTTTGATG 100 355
 CX649_07485 1539382 .. 1539398 -  -5.2  -4.16943   TTTTATATTCCAAAA              TGGTAA GTATG TTACCA              TTTTTAAAAATTGAG  66 513
 CX649_07470 NONE
 CX649_07465 1536472 .. 1536499 -  -9.2  -3.20435   TTAAGCATGTATCAA        GGCAGACAAC GAACAAAG GCTGTCTGCC         TGTTTTAAACGACAT  77 215
 CX649_07410 1525760 .. 1525803 -  -6.9  -3.17763   TGCACATGGTATGAA GAAAGCGGTG-AAA-CGAAGG CTAT CCATTGTTTTTCACCGCTTTC TATTAAAATATTTTT  65 82
 CX649_07405 1524413 .. 1524434 - -10.1  -4.11938   TAAAGCAATGATAAA           GCCCCCATT GCTT AAAGGGGGC            TATTGTTGAAGAGAA  93 25
 CX649_07345 1511660 .. 1511672 -  -3.4  -3.06991   TACCATCTGCAAAAT                CTGA AAAAA TCAG                CATTGCTCAACATAA  45 164
 CX649_07340 NONE
 CX649_07335 1508750 .. 1508789 -  -6.5  -2.80113   CACCATTTCACTACA  TGTGGATAACTAAAGGT GATTAT ACCAATAGTTATCCACT   TTTTTTATCGAAAAT  58 311
 CX649_07295 1499506 .. 1499534 - -17.6  -3.68936   GACTAATTGTAAGAA        GGGGATGTCTCA AAACA TGAGACATCCCC        TTGCAGCGATACAGT 100 99
 CX649_07165 1471353 .. 1471372 -  -7.8  -5.45802   TTTGGAAAATAAAAA            CCCTTCTC AGGT GAGGAGGG             TTATGTAAAATGAGA  93 171
 CX649_07160 NONE
 CX649_07155 1470780 .. 1470798 -  -4.4  -5.27923   TAATTTCACAAAAAA             GCACGGTC CTA GGTCGTGC             TTTGTCAAAAAATAC  79 43
 CX649_07150 NONE
 CX649_07145 1468976 .. 1469000 -  -7.1  -5.27023   ATTTGAAAAATAAAA          TCCCCCTTTCC TTA AAAAAGGGGGT          GATCAATTTGATTTA  89 28
 CX649_07140 1467420 .. 1467464 - -11.6  -4.75954   AAAATTCAAAAGAAA TTAGGCAACCTCAGCCCAAT TAAGT ATCGAGCAAAAGTTGCCTAA GAAATCCATTATGAT 100 383
 CX649_07085 NONE
 CX649_07080 NONE
 CX649_07075 1454421 .. 1454437 -  -7.9  -4.19735   CCCTTCAAAATGAAA              GACCGCA ATT CGCGGCC              TCGTTTGTTTTTCAG  78 43
 CX649_07070 1453526 .. 1453551 -  -6.3   -4.2679   CAATTTCCAGCAAAA         GCACATACATGA GTT TCATG-ATATGC         TTCGAAACAAGCTAA  71 37
 CX649_07065 1452476 .. 1452510 -  -9.3  -5.68489   GACAATAAGAAAAAA    TAGCGCGTCAGCGGGA GTAC TCCCGCTGACG-GTTT     TATAGCAGCATTGGT 100 326
 CX649_07040 1449872 .. 1449886 -  -7.1  -5.65496   GAGGAAAAATAAAAA               GGGGA GGACA TCCCC               TTTTCCAGTTGATTT  93 39
 CX649_07035 1449687 .. 1449704 -  -2.7  -3.54741   GATCATTGGTTTAAA             TCCCATA TGTA TACGGAA              TTTGGCGCATAAGCG  48 3
 CX649_07030 NONE
 CX649_07025 NONE
 CX649_07020 1446600 .. 1446642 -  -9.3  -3.93262   TTCTAATACATTAAA GGGGGCATC-AATAAGCCGT AAAA ATGACTTATTAGACACCCCC TCAAGTTTGTTTCTT  85 26
 CX649_07000 1442809 .. 1442823 -  -6.4  -4.03234   TCCCTTCTATATAAA               TATGCC ATT GGCACA               GTTGTTCCAACGCTT  69 373
 CX649_06950 NONE
 CX649_06945 1430875 .. 1430887 -  -4.1  -4.74132   ACAGGTTATGAAAAA                GCTGA TCT TCAAC                AGTTTGACAAAATCC  69 426
 CX649_06930 1427739 .. 1427770 -  -3.1  -4.42386   CTCCTATTTATAAAA      TTAGGAAGTGC TGCTCAGATG GAACTTCCTAA       TACTATACGTATATT  60 95
 CX649_06925 1426979 .. 1427020 - -24.9  -4.13767   TTTGTCATGCGAAAA TTTATTTTGGAAGGAAGGG GTAC CCCTTCCTTCCAAAATAAA  ATCTATATTAACCAA 100 330
 CX649_06905 1422383 .. 1422402 -  -2.3  -4.16814   CTAGTAGATAAAGAA            TTTAAAA ATAAAG TTTTAAA             ATATGTGGAAGAATA  56 127
 CX649_06885 1419137 .. 1419159 - -11.4  -5.27335   CGTTTTAAATAAAAA           GAAATTGGCA ATT CGCCAATTTC           GACAAATTCTTAATG 100 35
 CX649_06825 1403635 .. 1403658 -  -3.2  -3.35046   GGACTTTTGCAAAGA          TTAAAGGGAC AGCA ATTCCTTTAA           AAATTTTGCAACTCC  48 2
 CX649_06820 1403160 .. 1403190 - -14.9  -6.12458   CAAAAAAAGAAAAAA       TGGACGAAACAAG AGGAG CTCGTTTCGTCCA       TTTCATATTTATTCC 100 198
 CX649_06815 NONE
 CX649_06810 1401990 .. 1402004 -  -8.5  -5.86609   TCAAAAAAAGAAAAA               GCCCG ACAGG CGGGC               ATTATAAATGATCCG 100 27
 CX649_06805 1401336 .. 1401354 -  -9.6  -5.41359   AATTAAATGAAAAAA             CCGTTACT TAA AGCAACGG             CAAGGAAATTAATAG 100 55
 CX649_06800 1400483 .. 1400500 -  -6.3  -5.51612   ATATAAAAAAGAAAA             GCCTTCT AAGA AGAAGAC              TTTTTCTTGAACATT  87 273
 CX649_06795 NONE
        metH 1395062 .. 1395098 - -15.4   -5.4833   CGATTTAATAAAAAA    TGGATAACGAATTGCT AAACG AGCACTTCGTTATCCA    TATGCATCCGAAAAT 100 69
 CX649_06775 NONE
 CX649_06770 1391274 .. 1391314 - -10.6    -4.564   AAGCTCAAAGCAAAA GAATGATAGAAACCGGGGC GCCT GCCTCGGTTT-TTTCATTC  GAGCCTCAAATACTT 100 158
 CX649_06760 1389570 .. 1389594 -  -8.6  -4.84918   TTTACAAATAGAAAA          GCCCCAAAGT ATTGG ATTTTGGGGC          CTTTTTGCAGATTAA  95 37
 CX649_06735 1378841 .. 1378870 - -19.5  -3.82067   TATAAAAATTTGAAA       GGCTCGTCTTGTT TTAA AACAAGACGAGCC        TTCTTGTGCGCCCGG 100 314
 CX649_06715 1372079 .. 1372101 -  -3.4  -4.78077   TCCAAGCAAAATAAA           TGGAATAGCT AAT AACCACCCCA           AATTATGAAACTCCC  65 494
 CX649_06635 NONE
 CX649_06630 NONE
 CX649_06625 NONE
 CX649_06620 1357066 .. 1357078 -  -4.9   -3.6761   TCTTTTTAACAAATA                CATTA ATC TAATG                ACAAAGGAACAAATG  57 15
 CX649_06615 1356634 .. 1356652 -  -4.6  -2.58418   TGCGTAGAGAAAATC             TATTGTTC AGG GATCAATA             TGTTTGTCCTGTTGA  47 43
 CX649_06610 1356355 .. 1356381 -  -7.9  -3.33815   AGTCTTTTTAACGAA         CCAGGCGGCTA TGCAT TTGCCGTCTGG         TTTTGATCATTTACG  69 7
 CX649_06575 1341603 .. 1341618 -  -3.3  -3.71284   GCCGCATGAACACAA              TCCTT TTTCCG AAGGA               GCAGCATGCATATAT  52 265
 CX649_06565 1340614 .. 1340626 -  -6.3  -2.88861   CATTACCTTCACATA                GATTG AGC CAATC                CTCTGGGATTGGCTT  58 52
 CX649_06550 1335760 .. 1335788 - -16.1  -5.51165   AAAATTTCAAAAAAA        CACGCGGAAAACA TTT TGTTTGCCGCGTG        TTTTTTATATGATGA 100 74
 CX649_06495 1326359 .. 1326403 - -14.7  -4.86001   AGTACTTGACAAAAA GGCTGTCTC--AAAAGGTCAT AAAAA ATGACCTTTTACGAGACAGCC TTTATTCTTTCCAAT 100 210
 CX649_06475 NONE
 CX649_06470 1322171 .. 1322185 -  -2.8  -3.55622   CCCAAGCTGTGTAAA               TTCGCC TTC AGCAAA               AGATACATTTGAATG  48 281
 CX649_06460 1321692 .. 1321722 - -18.5  -4.05322   AAAGCTTGATATAAA       GAAACAAACCGGC TTTTC GCCGGTTTGTTTC       ATTAAAATACTTGTT 100 27
 CX649_06430 1315268 .. 1315280 -  -3.4  -5.46698   CTGAAAACGAAAAAA                GAAG AAACG CTTC                TTGTCGGAGATAATT  79 237
 CX649_06415 NONE
 CX649_06410 1312990 .. 1313022 - -20.8  -4.56597   TCTGGGTGTGAAAAA      GTAATCAGGACGGC ATACA GCCGTCCTGATTAC      TTTATTTCATACGGG 100 22
 CX649_06400 1311850 .. 1311872 - -16.4  -2.98088   GCTTAAAGCCACAGA           GCCGTCAAGA ATT TCTTGACGGC           CCGTTTTAATAAAAA 100 87
 CX649_06390 1309741 .. 1309768 -  -8.3  -3.93984   AAATTGATTCATAAA        GAGCCCGTTCC TGAGTT GGTGCGGGCTC         TTTATTTTTTTTCTT  79 27
 CX649_06370 1305471 .. 1305483 -  -3.4  -3.21276   CTCTCCTCTAGAACA                CCAT AAATG ATGG                CTTACGTTTTTCTAT  47 415
 CX649_06270 NONE
 CX649_06265 1287337 .. 1287365 -  -8.2  -5.18866   CGTAAAGAAATAAAA        CCTTACTCCGCT TGTTT ACCGGAATAAGG        CTGCTTTAACTCTTT  90 86
 CX649_06235 1281911 .. 1281938 -  -9.3  -3.73709   ATAAAAGCTGAACAA        CCTTACTCCAA TGAATT TTGAAGTAAGG         TTGCTTTGGCTTTAT  81 95
        purU 1277140 .. 1277167 - -11.3  -5.47218   TCTTATTGAAAAAAA        GCGCACATGCT GTGAAA AGCAAGTGCGC         TTTTTGATTAAAAGA 100 33
 CX649_06210 1276715 .. 1276748 -  -8.3  -4.12315   AAATTAACAATGAAA     TAAAAGAAATCGGCA AACA TGCTGGTTTCTTTTA      TTTACATGCTTTGCT  81 84
 CX649_06140 1261261 .. 1261298 - -12.9   -4.4648   ACCTTCATTACAAAA   GAGGCATCTTAGATGTT GAAC AAGATCTTAGATGCCTC    TCTAATGTGGAATTT 100 174
        clpP 1254923 .. 1254976 - -15.5  -4.57073   GATTCCTGCCAAAAA GTTGAATGAGGAGCTTTTGTCAAGA TCAT TCTTGACATTTGCTCCTCATTCAAA TGCGTGAAGGTATGA 100 113
 CX649_05995 1235230 .. 1235269 -  -8.1  -3.23711   GTCATAACGTATGAA GGGCTGTC-CATAAGTCAG TTTT CTG-CTTATGTAACAACCC  CTTTCAGAAAAAATT  70 135
 CX649_05905 NONE
 CX649_05900 NONE
 CX649_05895 1214096 .. 1214107 -  -5.8  -3.12351   CCGCCGTATACGGAA                CCGT ACAT ACGG                 TGGTGTGAGAGGACG  57 138
 CX649_05810 NONE
 CX649_05805 NONE
 CX649_05800 1193339 .. 1193350 -  -5.8  -3.12351   CCGCCGTATACGGAA                CCGT ACAT ACGG                 TGGTGTGAGAGGACG  57 138
 CX649_05715 NONE
 CX649_05710 NONE
 CX649_05705 1172616 .. 1172627 -  -5.8  -3.12351   CCGCCGTATACGGAA                CCGT ACAT ACGG                 TGGTGTGAGAGGACG  57 138
 CX649_05620 NONE
 CX649_05615 NONE
 CX649_05610 1151666 .. 1151692 -  -2.9  -5.17576   TATGAAGCCAAAAAA        GCCGC-TGCTCC ATAG GGAGGAAGCGGT         GAATCCCGTGGGAGA  69 267
 CX649_05525 NONE
 CX649_05520 NONE
 CX649_05515 1131087 .. 1131098 -  -5.8  -3.12351   CCGCCGTATACGGAA                CCGT ACAT ACGG                 TGGTGTGAGAGGACG  57 138
 CX649_05430 NONE
 CX649_05425 NONE
 CX649_05420 1110330 .. 1110341 -  -5.8  -3.12351   CCGCCGTATACGGAA                CCGT ACAT ACGG                 TGGTGTGAGAGGACG  57 138
 CX649_05335 NONE
 CX649_05330 NONE
 CX649_05325 1089607 .. 1089618 -  -5.8  -3.12351   CCGCCGTATACGGAA                CCGT ACAT ACGG                 TGGTGTGAGAGGACG  57 138
 CX649_05240 NONE
 CX649_05235 NONE
 CX649_05230 1068516 .. 1068533 -  -7.1   -2.5805   AGTACGCTTCATAAC             CTACTTA GTGA TAAGTAG              CTGAACCGTCAGAAG  60 417
 CX649_05200 1062721 .. 1062733 -  -5.5   -3.6654   TAAAGCTGAAAAAAG                GCGCA GCT TGCAC                AGAGGAAGAATTAAA  60 464
 CX649_05175 1056065 .. 1056105 -  -4.1  -4.29929   ACTAAATGTAAGAAA GGGGTGTC-AATAAGCCG AAAAAA CGACTTATTAGACAAGCC  CCTTTTATTAACGCG  64 73
 CX649_05145 1050597 .. 1050652 - -11.8  -4.68506   AACCAATTTCAAAAA TAAGGAAACAGAGCGAATGGA-AAAAC TCATT GTTTTCTCCATTCGCTCTGTTT--TTA TGGACTTTTTAGACA 100 178
 CX649_05105 NONE
 CX649_05100 NONE
 CX649_05095 1035913 .. 1035928 -  -2.6  -4.55128   ATGGCCAAATTAAAA              GACAAA GTTT TTTATC               CGAAACAGGATCACG  62 426
 CX649_05030 1017891 .. 1017925 -  -7.1  -3.27617   TAATAAACGTAGCAA     GCAGCCCGATTCCTA TATAC TAGGAGTTTGGCTGC     TTAATTTTTTGGAAG  65 204
 CX649_04925  991658 ..  991684 -  -5.2  -5.40072   TTTTTCTTAAAAAAA        CGCTCAGCTCT TCCGAC AG-GCTAAGCG         TTTTTTTCTGCACTA  84 62
 CX649_04900  985541 ..  985567 -  -3.7    -4.371   TTGATTACAGCAAAA        TTCAGCTGCACG TAAC CGT-CAGCCGTA         CAGGGCAAACGCGTT  62 286
 CX649_04895  984942 ..  984969 -  -5.5   -2.6248   ATAACTAGATAATAC        GGGTGCCGAAA GCTTCT TTTTGGCGCCC         TTTTTTATTTTTTGA  51 138
 CX649_04870  979771 ..  979786 -  -2.5  -4.41494   TATTTTCAATCAAAA              CCCAG AAAGTG CTGAG               AGTATTATGAGAGCT  58 30
 CX649_04865  979079 ..  979094 -  -3.3  -4.67982   GGTTAGTGAAGAAAA              TACTC GGCTAA GAGTA               GAGATGGATGGTGCA  65 412
 CX649_04845  975108 ..  975120 -  -4.9  -3.10236   AACGTAATCCTAATA                CTATT ATT AATAG                CCATCAATTTGAGTA  53 430
 CX649_04780  960781 ..  960793 -  -3.4  -3.69395   GTCATCAGCCAATAA                TGGA CAAAT TCCA                GCTACAGTCCGGCGC  52 238
 CX649_04765 NONE
 CX649_04760  957080 ..  957090 -    -4  -3.64703   TGTTTTTTATTGAAA                 TTCT CGG AGAA                 ATACTTGAACTACAT  54 229
 CX649_04740  952706 ..  952728 -  -2.1  -4.73108   TCTATAAAATGAAAA           TCAAAAGAA TACTT TTCTTTTTA           TCAATAAAACGATAT  62 128
 CX649_04680  936498 ..  936525 -    -7  -2.84732   CTTAAAGGCATCATA        GACGCAGCTAAGA AAA TCCT-GCCGCGCC        AGCGCATGCTTCCTG  57 443
 CX649_04670  935158 ..  935208 - -12.6  -2.88788   TCATGTATAAAACAT TTATCCCGACTCTTCTTTCTCCTT TTA AAGGAGGGAGAAGAGTCGGGGTTT TTTATTTGAAAAAGG  86 71
 CX649_04650 NONE
 CX649_04645  928263 ..  928276 -  -5.3  -4.68593   GGGAGGAGGGAAAAA               GTTGA AAAT TCAAC                GCATTGAAAGGCAAA  74 299
 CX649_04570  913830 ..  913840 -    -4  -3.61601   GAAAATGGAGAAAGA                 TTTC GTT GAAA                 TTGCCGTATTGCTTT  52 142
 CX649_04565  913096 ..  913107 -  -3.6  -2.58861   TATGACGCTGATAAC                GCCC TAAA AGGC                 ATATAATTCAAAGAA  45 17
 CX649_04560 NONE
 CX649_04555 NONE
 CX649_04550  911561 ..  911579 -  -3.9  -4.71307   CAAAAACGAAATAAA             CATAAAG ATCAG CTTCATG             AGTTATGAAGCGCTT  67 263
 CX649_04520  903849 ..  903883 - -17.3  -4.95806   AAACTATCATAAAAA     CGGCTTTAGCCCTGT GTTCT AAAGGGCTAAAGCCG     TTTATAATCGACTGT 100 144
 CX649_04430  883164 ..  883205 - -11.1  -4.07678   TTCTAAAACATTAAA GGGGC-GTCT-ATAAGCCG GAAAAT CGACTTATTAGACAGCCCC TTAAAAATTTGTTTC  93 294
 CX649_04330 NONE
        hypA NONE
        hypB  864344 ..  864357 -  -5.3  -2.93853   TTTGCGCAACGAAAG               TCAGA AGGT TCTGA                TATTTTAAAATACAT  52 179
 CX649_04315  862870 ..  862888 -  -4.6    -3.889   CCGAATCACAGTAAA             TGGAAATC GCC GATTTCAA             ACATACAAAATAACT  57 445
 CX649_04310  861032 ..  861045 -  -2.3  -2.58418   CGTTCATACAAAATT               CCTCC TTCT GCAGG                CGTACCGTTCCCATT  39 154
 CX649_04305 NONE
 CX649_04300  860004 ..  860017 -  -3.8  -5.55769   TGGTAGAAGAAAAAA               CCTG CCGCTC CAGG                AAAAACACCGATTGG  79 269
 CX649_04290 NONE
 CX649_04285 NONE
 CX649_04280  856432 ..  856443 -  -4.4  -3.78096   TAAAGAAAACTAGAA                GTTC ATTC GAAC                 ACTAAAACACTGAAA  57 67
        hypC NONE
 CX649_04270 NONE
        hypE  853623 ..  853635 -  -3.3  -3.15996   CATGATTGATTAACA                GATGC GAG GCAAC                GGATCGCCAATCAGC  47 7
 CX649_04260  852989 ..  853003 -  -3.4  -4.82128   TTACGAAAGACAAAA               GGACGA AAA CCGACC               CCTTGCACAACACCA  65 332
 CX649_04245 NONE
 CX649_04240 NONE
 CX649_04235  846879 ..  846918 - -10.9  -5.08011   AAAACTTTTAAAAAA  CGCACCTGAAAAAAAGA TGGAAG TTTTCCTTTCAGGTGCG   GAATGTCATTTTTAA 100 94
 CX649_04160  828521 ..  828532 -  -5.8  -5.54907   TTGACAAAAGAAAAA                GCTG CTAG CAGC                 TTGTCAACGATGTTT  86 46
 CX649_04115  818291 ..  818309 -    -9  -3.56644   ATACTTAAAAATACA             GAAATTTG AAT CAAATTTC             AAAACGTATTGATTT  77 442
 CX649_04095  815209 ..  815242 -    -4  -4.32607   CGAAAATGGAACAAA     TCTCTTTTTTAGGT ATACGA ACCAAAAAAATAGA      CAAAAAAGCACAGGG  62 77
 CX649_04090  814895 ..  814910 -    -9  -5.60993   CTCTCCACAAAAAAA              CGTTCG ATTC CGAACG               CTTTTAAAATGTTCT  95 39
 CX649_04085  814011 ..  814042 -  -3.7   -2.7314   TGCTAAATGACATTA      CAATGCGCCCTCTT TTATT AAGGGGG-GCGTTG      TTTTGTTTAAATTCC  45 129
 CX649_04075  812103 ..  812148 - -12.1  -3.44218   AAAATGAAAAGCTAA GAGGCTCTTAAATCAAGAT TTCCTCCT ATCTCGAATCAAGAGCCTC AAATAATTCAGCTGG  90 335
 CX649_04070  811352 ..  811372 -  -7.5  -5.10004   AAAAATAATGAAAAA            GGGTATCCA TCA CGGATGCCC            TTTTTTGTTGGAAAT  88 521
 CX649_04060 NONE
 CX649_04055  808035 ..  808088 - -11.3  -4.37092   ATCTTTTGGATAAAA CAAACACCTCCATTCATCGAATTTAT TTG ATGCATTCGAC-ACTGGAGGTGTTTG TCCCTTTCCTCATTT 100 118
 CX649_04040  805114 ..  805155 -  -5.3  -6.20267   TGAAAAATAAAAAAA GGAGCTTATATGAA-AAGGG CTT CACTCCTTCATATGAACTCC CTAAAATCATGTATA  95 92
 CX649_04035 NONE
 CX649_04030  802601 ..  802617 -  -3.7  -4.56597   CCCCTTTCTTAAAAA              TCTTTCA ACC TGAAGGA              AAATGCCCGTAAAAC  65 292
 CX649_04020  801492 ..  801508 -  -9.5  -2.56018   CTATTAAAAAGAAGC              TTCAGGA GCA TCCTGAA              TTCAAAATGATGCTA  72 247
 CX649_04005 NONE
 CX649_04000  797126 ..  797146 -  -8.3  -5.63645   CCAAAACATAAAAAA            GAGCCAG ACATAAG CTGGCTC            TCATCTGCCTATTAA  93 106
 CX649_03995  795401 ..  795423 -  -5.6  -5.84432   CACAACATAAAAAAA           CTTTCCCA AAAATCG CGGGAAAG           AGTTTGGAAACGTCA  91 140
 CX649_03990  794368 ..  794382 -  -4.2  -4.51812   TGTTATAAGAATAAA               CTCCCT GGA AGGCAG               ATTGTTCCCAGAAGG  67 443
 CX649_03975 NONE
 CX649_03970  791262 ..  791297 - -17.9  -4.74013   CGTAAACATACAAAA    GCCCTTAGAGAAAAA CAGCTC TTTTTCTCTAAGGGC     TTTATTTTAGAGACT 100 99
 CX649_03965 NONE
 CX649_03960  789248 ..  789299 -  -5.3  -2.76737   CATTAATTTTGAAAC TTTATGGGGCAGTCTAATAAGTCGA TTTT CCGGCTTAT-AGAC-GCCCCTTTAA TGTTTTAGAAACGTT  51 243
 CX649_03955  787929 ..  787944 - -10.4  -4.63527   GCAGTATTCCAAAAA              GGGGGA ACAA TCCCCC               TCTTTTGGAACTTAT 100 49
 CX649_03945 NONE
 CX649_03940  784276 ..  784292 -  -6.6  -2.93708   TTTTTTCAAAAAGAC              TGTGCA ATTCG TGCACA              CTAAGAACTAATCTC  58 275
 CX649_03935  782130 ..  782141 -    -3  -3.98915   CACAAATACAGGAAA                TTTC ATTC GAAA                 TTTATTTATCATTTT  55 491
 CX649_03905  777630 ..  777643 -  -3.1  -4.35958   GGAGCAAACAAATAA               GAAGA TGAC TCTCC                CCTTTCGGTTAATTG  62 406
 CX649_03895 NONE
 CX649_03890  774169 ..  774180 -    -3   -4.1021   CTTGAGAATTACAAA                CATT TACA AATG                 AAAGAGCACGCCCAA  57 143
 CX649_03885  772164 ..  772191 -  -7.8  -4.27192   AAAGTCCTATTAAAA        GCTGTGAATGGGA TAT TTCCA-TCACAGC        TTTTTTACAAAATTA  78 38
 CX649_03880  771443 ..  771498 -  -8.6  -3.91197   GCATAAACGACTAAA CATTGACGTTTCTGATCAGCTTGTC ATTTTTA GACAAACTGATCAGAAA-GCTAAAG GCGAAGTAAAGTTCT  82 52
 CX649_03860 NONE
 CX649_03855 NONE
 CX649_03850 NONE
         tkt NONE
 CX649_03840 NONE
 CX649_03835  763243 ..  763278 - -11.4  -5.32944   CTTACAACGAAAAAA    GAATTAATCTTACCTT GAGA AAGGAAAGACTAATTC     TTACTTCACAATTCC 100 159
 CX649_03830  762305 ..  762321 -  -2.3  -2.68434   TTTGATATTATACTA              CTTTCTG TCA CAAAAAA              GTACCGAGAGGTTTA  40 84
 CX649_03825 NONE
 CX649_03820  761271 ..  761307 - -13.9  -5.27335   TCTTTTAAACAAAAA    CATAAGCCTTTCGGG GATTTGT CCCGAAAGGCTTATT    TATATGGAATAAACG 100 79
 CX649_03800  759352 ..  759368 - -10.1  -4.81752   AAAAATAGTGAAAAA              CGACGGA AGC TCCGCCG              CTTTCAAGTCTCATC 100 29
        acnA  756365 ..  756386 - -10.9  -4.64763   TTAGCCAAAAAATAA           CGGGAACTA TGAA CAGTTCCCG            CTTTTTTTCAATTAT 100 40
 CX649_03790  755681 ..  755697 -  -5.1  -5.93252   TGTAAAAAGAAAAAA              TCGGC AAAGTCA GCCGA              TTCTTTTTGATTCCC  91 61
 CX649_03785  755324 ..  755363 -  -4.5  -2.99704   TTGTCATCAAATAAT  CGCCTCCTGCTTTTATTG TTTAC CAATAAA-GCAGAAAACA  TGCTGTCAAACACGA  50 51
 CX649_03780  755155 ..  755180 -  -6.2  -4.56914   TTATGTAAATTAAAA        GGCG-GT-GGAC ATAT GTCCTACTCGCC         TTTTGTCTGAATCAC  74 17
 CX649_03775  754557 ..  754583 -  -8.8  -4.69027   AAATCGATCGAAAAA         GCCTGCATCA GCGTCTG TGATACAGGC         TTTCTATTTTAGGCC  93 230
 CX649_03770 NONE
 CX649_03765  753681 ..  753718 - -15.9  -3.78022   GCTATAGTCAGTAAA   GAAACCCAACC-GCAAAT TTA ATTTGCCGATTGGGTTTC   TTGTTTCATCTCATC 100 86
 CX649_03750  750549 ..  750576 - -11.4  -4.06419   CTTTTTTATAAATAA        GCGTACAGATGA TACA TCATCCATACGC         TCTTGCGGTTAGCTT  93 34
 CX649_03745 NONE
 CX649_03740  748790 ..  748815 -    -9  -4.45168   GCTGTAAAATAGAAA         GGAGCGGGAA CTCATC TTCTCGCTCC          TTGTTTTAATTGTGA  89 11
 CX649_03730  747594 ..  747610 - -10.9  -4.79949   TCTTCAAAAAAAGAA              CCCATCA AGA TGATGGG              GGAAACATTTGTTAT 100 37
        parE NONE
        parC  743561 ..  743576 -    -9  -5.60993   CTCTCCACAAAAAAA              CGTTCG ATTC CGAACG               CTTTTAAAATGTTCT  95 39
 CX649_03715  742677 ..  742708 -  -3.7   -2.7314   TGCTAAATGACATTA      CAATGCGCCCTCTT TTATT AAGGGGG-GCGTTG      TTTTGTTTAAATTCC  45 129
 CX649_03705  740769 ..  740814 - -12.1  -3.44218   AAAATGAAAAGCTAA GAGGCTCTTAAATCAAGAT TTCCTCCT ATCTCGAATCAAGAGCCTC AAATAATTCAGCTGG  90 335
 CX649_03700  740018 ..  740038 -  -7.5  -5.10004   AAAAATAATGAAAAA            GGGTATCCA TCA CGGATGCCC            TTTTTTGTTGGAAAT  88 521
 CX649_03690 NONE
 CX649_03685  736701 ..  736754 - -11.3  -4.37092   ATCTTTTGGATAAAA CAAACACCTCCATTCATCGAATTTAT TTG ATGCATTCGAC-ACTGGAGGTGTTTG TCCCTTTCCTCATTT 100 118
 CX649_03670  733780 ..  733821 -  -5.3  -6.20267   TGAAAAATAAAAAAA GGAGCTTATATGAA-AAGGG CTT CACTCCTTCATATGAACTCC CTAAAATCATGTATA  95 92
 CX649_03665 NONE
 CX649_03660  731267 ..  731283 -  -3.7  -4.56597   CCCCTTTCTTAAAAA              TCTTTCA ACC TGAAGGA              AAATGCCCGTAAAAC  65 292
 CX649_03650  730158 ..  730174 -  -9.5  -2.56018   CTATTAAAAAGAAGC              TTCAGGA GCA TCCTGAA              TTCAAAATGATGCTA  72 247
 CX649_03635 NONE
 CX649_03630  725792 ..  725812 -  -8.3  -5.63645   CCAAAACATAAAAAA            GAGCCAG ACATAAG CTGGCTC            TCATCTGCCTATTAA  93 106
 CX649_03625  724067 ..  724089 -  -5.6  -5.84432   CACAACATAAAAAAA           CTTTCCCA AAAATCG CGGGAAAG           AGTTTGGAAACGTCA  91 140
 CX649_03620  723034 ..  723048 -  -4.2  -4.51812   TGTTATAAGAATAAA               CTCCCT GGA AGGCAG               ATTGTTCCCAGAAGG  67 443
 CX649_03605 NONE
 CX649_03600  719928 ..  719963 - -17.9  -4.74013   CGTAAACATACAAAA    GCCCTTAGAGAAAAA CAGCTC TTTTTCTCTAAGGGC     TTTATTTTAGAGACT 100 99
 CX649_03595 NONE
 CX649_03590  717914 ..  717965 -  -5.3  -2.76737   CATTAATTTTGAAAC TTTATGGGGCAGTCTAATAAGTCGA TTTT CCGGCTTAT-AGAC-GCCCCTTTAA TGTTTTAGAAACGTT  51 243
 CX649_03585  716595 ..  716610 - -10.4  -4.63527   GCAGTATTCCAAAAA              GGGGGA ACAA TCCCCC               TCTTTTGGAACTTAT 100 49
 CX649_03575 NONE
 CX649_03570  712942 ..  712958 -  -6.6  -2.93708   TTTTTTCAAAAAGAC              TGTGCA ATTCG TGCACA              CTAAGAACTAATCTC  58 275
 CX649_03565  710796 ..  710807 -    -3  -3.98915   CACAAATACAGGAAA                TTTC ATTC GAAA                 TTTATTTATCATTTT  55 491
 CX649_03535  706296 ..  706309 -  -3.1  -4.35958   GGAGCAAACAAATAA               GAAGA TGAC TCTCC                CCTTTCGGTTAATTG  62 406
 CX649_03525 NONE
 CX649_03520  702835 ..  702846 -    -3   -4.1021   CTTGAGAATTACAAA                CATT TACA AATG                 AAAGAGCACGCCCAA  57 143
 CX649_03515  700830 ..  700857 -  -7.8  -4.27192   AAAGTCCTATTAAAA        GCTGTGAATGGGA TAT TTCCA-TCACAGC        TTTTTTACAAAATTA  78 38
 CX649_03510  700109 ..  700164 -  -8.6  -3.91197   GCATAAACGACTAAA CATTGACGTTTCTGATCAGCTTGTC ATTTTTA GACAAACTGATCAGAAA-GCTAAAG GCGAAGTAAAGTTCT  82 52
 CX649_03490 NONE
 CX649_03485 NONE
 CX649_03480 NONE
         tkt NONE
 CX649_03470 NONE
 CX649_03465  691909 ..  691944 - -11.4  -5.32944   CTTACAACGAAAAAA    GAATTAATCTTACCTT GAGA AAGGAAAGACTAATTC     TTACTTCACAATTCC 100 159
 CX649_03460  690971 ..  690987 -  -2.3  -2.68434   TTTGATATTATACTA              CTTTCTG TCA CAAAAAA              GTACCGAGAGGTTTA  40 84
 CX649_03455 NONE
 CX649_03450  689937 ..  689973 - -13.9  -5.27335   TCTTTTAAACAAAAA    CATAAGCCTTTCGGG GATTTGT CCCGAAAGGCTTATT    TATATGGAATAAACG 100 79
 CX649_03430  688018 ..  688034 - -10.1  -4.81752   AAAAATAGTGAAAAA              CGACGGA AGC TCCGCCG              CTTTCAAGTCTCATC 100 29
        acnA  685031 ..  685052 - -10.9  -4.64763   TTAGCCAAAAAATAA           CGGGAACTA TGAA CAGTTCCCG            CTTTTTTTCAATTAT 100 40
 CX649_03420  684347 ..  684363 -  -5.1  -5.93252   TGTAAAAAGAAAAAA              TCGGC AAAGTCA GCCGA              TTCTTTTTGATTCCC  91 61
 CX649_03415  683990 ..  684029 -  -4.5  -2.99704   TTGTCATCAAATAAT  CGCCTCCTGCTTTTATTG TTTAC CAATAAA-GCAGAAAACA  TGCTGTCAAACACGA  50 51
 CX649_03410  683821 ..  683846 -  -6.2  -4.56914   TTATGTAAATTAAAA        GGCG-GT-GGAC ATAT GTCCTACTCGCC         TTTTGTCTGAATCAC  74 17
 CX649_03405  683223 ..  683249 -  -8.8  -4.69027   AAATCGATCGAAAAA         GCCTGCATCA GCGTCTG TGATACAGGC         TTTCTATTTTAGGCC  93 230
 CX649_03400 NONE
 CX649_03395  682347 ..  682384 - -15.9  -3.78022   GCTATAGTCAGTAAA   GAAACCCAACC-GCAAAT TTA ATTTGCCGATTGGGTTTC   TTGTTTCATCTCATC 100 86
 CX649_03380  679215 ..  679242 - -11.4  -4.06419   CTTTTTTATAAATAA        GCGTACAGATGA TACA TCATCCATACGC         TCTTGCGGTTAGCTT  93 34
 CX649_03375 NONE
 CX649_03370  677456 ..  677481 -    -9  -4.45168   GCTGTAAAATAGAAA         GGAGCGGGAA CTCATC TTCTCGCTCC          TTGTTTTAATTGTGA  89 11
 CX649_03360  676260 ..  676276 - -10.9  -4.79949   TCTTCAAAAAAAGAA              CCCATCA AGA TGATGGG              GGAAACATTTGTTAT 100 37
        parE NONE
 CX649_03350  671677 ..  671705 -  -8.1  -4.75356   AAATAGAGTGAAAAA        CCCCTATCCTCAC TAA ATCCGGATAGGGG        TGATCATTTTTTATG  86 36
 CX649_03340  669484 ..  669504 -  -6.1  -4.11394   AGTTTAGTGGTAAAA            CCTCAGCCT TCC AAGCTGATG            TCGTGGGTTCGATTC  69 392
        cmpA  667173 ..  667197 -  -9.9  -3.14976   TAACAACAGAAATCA          CGGCTGTCGGC AAA GTCGACAGCTG          ATTTTTTATCAACCT  79 127
 CX649_03205  655087 ..  655109 -  -5.7  -3.83318   TGTTGAATAAGACAA          CCGTCTTTTT CGAA AAAAAG-CGG           ATTCAATCATTGGAA  63 243
 CX649_03185  650127 ..  650140 -  -6.7  -3.35996   GATTCTTAGGTAGAA               GGTTC TAAC GAACC                TTAATTTACTAAGCT  62 34
 CX649_03170  647026 ..  647075 - -12.4  -2.78211   ACGTTTCTAAAACAT TCATGGGGGCGTC-AATAAGCCGT AAAA ACGACTTATTAGACACCCCCA-GC GGCTTTTTCTTTATT  86 36
 CX649_03155  643319 ..  643335 -  -5.2  -4.68908   TTTAGGGAAAACAAA              TGTTCA TGATG TGAACA              AAAGTGATCTTGTCG  74 136
 CX649_03120 NONE
 CX649_03115  633910 ..  633928 -  -5.3   -3.9461   TTGGTTTAAGAACAA             GAAGCTC CGAGC AAGCTTC             CGCTTTATCGGGAAT  61 354
 CX649_03105 NONE
 CX649_03100  630929 ..  630942 -  -2.5  -4.51799   ATTAAAGGTATAAAA               TTATA TATA TATAA                TATTTAAAACAGTTG  60 165
 CX649_03075  626057 ..  626067 -  -2.6  -3.69068   TGATCGCAACAAACA                 TAAA TGC TTTA                 TCAATAATATGAAAC  48 486
 CX649_03065 NONE
 CX649_03060  623071 ..  623098 -  -9.3  -4.24342   CCTTTCAGGAAGAAA        CAGATGAG-GGT GAAAA ACCGCTCATCTG        TTTATCAAATTATTT  89 35
 CX649_03055  622348 ..  622361 -  -3.9  -4.05033   GTTAGTGGATACAAA               TTGAA TTTA TTCAA                TATATTTACATGGTA  57 55
 CX649_03050  621581 ..  621591 -  -2.6  -2.91997   CCTCATAGACAATTA                 TAAT ACC ATTA                 TGGCCAGAAACCTAC  42 52
 CX649_03045  620253 ..  620267 -  -4.2  -3.30203   TTAGGAAGAAGCGAA               GGTACA TCA TGTTCC               CCCCTTTCTTTATTA  51 49
 CX649_03040  618905 ..  618924 -  -5.6  -2.73875   TGTCCGGGAAGACGA            CCGACAGG AAGA CTTGCCGG             ATTTACCTGCCACGT  51 425
 CX649_03015  614586 ..  614623 -   -13  -4.46926   TATGGCAGCAGAAAA   GCATAAAAGCAGTC TAGACTTGCG GACTGCTTTTATGC    CGTTGTGTGCTGAAC 100 20
 CX649_03000 NONE
 CX649_02995 NONE
 CX649_02990  609249 ..  609263 -  -3.6  -2.60496   TCCTTCCTTAAACAT               TCACTT TAG AAGTAA               TATTTTTCGCCCATT  45 3
        dmpG NONE
 CX649_02980  607382 ..  607392 -    -4  -3.09516   CCTCCTATCAGGTAA                 GAAA TTT TTTC                 TTTCGCTATTTAAAC  47 35
 CX649_02975 NONE
 CX649_02970  606070 ..  606113 - -14.2  -3.67175   AGTTCCTAAAATGAA GGGGCT--CCAAAAAGTCAG TTAATC CTGACTTTTTGGACAGCCCC GCAACATTTTTTATA 100 225
 CX649_02925  595231 ..  595246 -  -3.4   -3.4071   AATAAGGATGGAGAA              TTAAAA ATAA TTTTAA               AAAGGTATTGACGAA  48 191
        pdaB  594294 ..  594320 -  -4.5  -5.46698   GCCAAAAGCAAAAAA        GAGCT-GAAGGA GTTT TCCTTATAGCTC         TTTAAAATGCTTATT  82 93
 CX649_02910  592920 ..  592949 - -11.3  -3.69699   AGAAAAGTAAAGGAA       GGGAGAGGAGGTC TATT GGCCTCCGCCCCC        GCCTTCGTTTCCGGA  90 8
 CX649_02505  526659 ..  526683 - -10.1  -5.00884   ATTTTGTGTAAAAAA          GACCACTGA CTTTTTT TCAGTGGTC          TACGCTGATAATACT 100 25
 CX649_02500 NONE
 CX649_02495 NONE
 CX649_02490  524673 ..  524698 - -13.5  -5.78622   GGAGGCTAAAAAAAA         TGATGAATTGG CTTT CCAATTCATCA          AAAAACTTATTTTGG 100 32
 CX649_02485 NONE
 CX649_02480 NONE
 CX649_02475 NONE
         noc  519234 ..  519257 -  -6.8  -5.55769   TTTTATAATAAAAAA          CTCTTCAC GAAAAAGT GTGAAGAG           TTATTTTGGAATTTT  87 26
 CX649_02465 NONE
 CX649_02460 NONE
 CX649_02450  516272 ..  516295 -    -6  -5.93809   GCTCTATAAAAAAAA          GACTGCCG ATTTAAGG CAGCAGTC           TTTCATTGCTTCTCA  93 28
 CX649_02445  514996 ..  515009 -  -3.9  -2.71681   CAATTCGGGCAAGGA               GTAAT TATC ATTAC                TCACAAACCAAAATT  45 69
 CX649_02440 NONE
 CX649_02435 NONE
        rpsR  513782 ..  513805 -  -8.9  -5.56673   ACGGACAAGAAAAAA          GCAACAAGG GATTCA CCTTGCTGC           CTTTGAAATTTCTTA  95 38
 CX649_02425 NONE
 CX649_02420 NONE
 CX649_02415  510248 ..  510301 -    -4   -4.2687   TCCAAAAAGTATAAA GAGAAATGTGGCATTACTTCAAGA TCAACT TCTTTCCATAATACCACATTGCTC CTTGCCATTATTCTT  59 33
 CX649_02410  508816 ..  508834 -  -6.7  -4.73105   ACTTACAAAAAACAA             CTGCCTC ATCAA GAGACAG             CAGGAGGAATATGAT  80 15
 CX649_02405  507349 ..  507368 -  -7.8  -5.94713   ATTTCACAAAAAAAA            GAGGGAAC AGCC GATCCCTC             CAAGTTTATTATATT 100 34
 CX649_02400 NONE
 CX649_02395  506094 ..  506113 -   -10  -4.65512   AAAACAAGCAGAAAA            CCCCTAGC TATT GCTAGAGG             TCTTAAATTCAATAG 100 217
 CX649_02390 NONE
        walK NONE
 CX649_02380 NONE
 CX649_02375 NONE
 CX649_02370  500478 ..  500489 -  -5.8   -3.1984   GACAACATTAACATA                CCCA ACGA TGGG                 GAAATTCAAACATTT  59 39
 CX649_02365  499130 ..  499154 - -10.7  -4.49389   ACCCCATAATGAAAA          CAGGAAAGCTG ATT CCGCCTTCCTG          TTCTTTAAAAAGATT 100 30
 CX649_02360  498947 ..  498959 -  -2.7  -3.04398   TTCGTGTCCGAAAAT                CAGTT CCC AACTA                TATATACTGCGGTTT  43 12
 CX649_02355  498263 ..  498281 -  -3.2  -2.72344   TTGTATCGTGAAGCA             GATAATGA AAC TGATTATC             CACAGCCAATACCCG  43 85
 CX649_02350  497309 ..  497331 - -12.8  -4.74219   ATAAACAAATTAAAA           GACCATTCCA AAA TGGAATGGCC           TTAAACCCCAATCTT 100 302
 CX649_02340 NONE
 CX649_02335 NONE
 CX649_02330 NONE
 CX649_02325 NONE
 CX649_02320  489123 ..  489134 -    -3  -3.16079   AATAGAATTAGTTAA                GAAA AGAT TTTC                 TTATACTTCATATTC  47 26
 CX649_02315 NONE
 CX649_02310  487622 ..  487650 - -13.3   -5.1615   TTAAGAGGCAAAAAA        GCATTGGGAGTTA GTT TAACTCTCAATGC        TTTTTTATATAAATT 100 124
 CX649_02295 NONE
 CX649_02290  483713 ..  483736 -  -9.7  -3.68827   TATTCATTAGTTAAA          GGAACAATG AACTGG CATTGTTCC           TTTTTCAATTTCATT  82 36
 CX649_02275 NONE
 CX649_02270  480670 ..  480680 -  -2.6  -4.16251   AGATAATCTTTAAAA                 TTTA ATA TAAA                 AATATAATAATTAAC  55 284
 CX649_02260 NONE
 CX649_02255  478427 ..  478439 -  -7.7  -2.60813   GATGGGCGCAAAGAT                TGCCA CAA TGGCA                GCAGCCCCGATGAGA  63 317
 CX649_02225  472789 ..  472803 -  -2.8  -2.98823   CTGCGCCTAGAGATA               CTCTAT GAA ATTGAG               TTTTTCTCTTGCGGC  43 461
         pta  470510 ..  470539 - -13.8  -4.33739   CAAAAAATGTGAAAA       GCAGGGAATTTT TGATGG AAAATTCCCTGC        TTTTTGTTTATGCAA 100 33
 CX649_02180  465871 ..  465905 -  -8.1  -5.04249   TGCCTAAAAAATAAA     TCAAGCAGAGAAA AACAAACCG TTTCTCTACTTGA     TTTTGTATGTTTGAT  90 193
 CX649_02160  460934 ..  460955 - -10.2  -4.56597   CTCCTGTCTGAAAAA           GCAAGAGG CTGATC CCTCTTGC            TTAAACTGTATCATG 100 72
        speB  459993 ..  460014 -  -7.3  -5.29445   TTTGAATAATAAAAA           GCCATAGCA GAAG CACTATGGC            AGAAAAATGACTTTA  89 38
 CX649_02150 NONE
 CX649_02145  457614 ..  457648 - -10.3  -5.27769   ACAAAAAAGCAAAAA    GCCCTTTTTCACACAA TAAC TTGT-TGAAAAAAGGC     TTTTTCTGCTCTCTT 100 137
 CX649_02135  454323 ..  454351 -  -5.2  -4.09685   TTCTATTTTTTAAAA        TCTTAAGGCGCC CTTGT GGCGCCTTTTAA        AATTGCTTTCTATCT  66 51
        rpoE  453407 ..  453446 - -18.9  -5.84381   GCATCAACAAAAAAA  TATGAAAGCTCCCTTCC TTTTCG GAAAGGGAGCTTTCATA   TTGTAATTTGTTTTC 100 110
 CX649_02125  451681 ..  451708 -    -7  -5.55664   TTACGAGCAAAAAAA        GGCTGTCTAACC AATC GTTCAGACAACC         TTTTCTTTCATTTTT  93 40
 CX649_02120  451321 ..  451335 -  -6.4  -4.22591   AAGAATGCGAAGAAA               TTGGCA AAT CGCCAA               TTTCTTTTTTTATGA  71 199
 CX649_02110  450097 ..  450120 -  -5.3  -4.21194   TGCGATTAGCGAAAA          GCTCAAATC TAGCAT GACCTGAGC           AAGAAAAATGTATGT  66 131
         fba  449124 ..  449150 -  -7.2  -4.28187   AAACAAGAAACGAAA         CCGCCATACTTC ATA AAAGAAAGGCGG         CCGTTAATTGCATAA  78 63
         fsa  448408 ..  448423 - -11.8  -3.58731   AAAAGATTTTTCAAA              CGGGGG AAAT CCCCCG               TTTTATCATTTATCG  91 35
 CX649_02095 NONE
        glpX  445816 ..  445842 -  -3.1  -4.60487   TATTATTTTTAAAAA        GCAGAGGAGA TCTATTCG TCTCCTCT-C         ACTAAGATCGAATAA  62 27
         rho  444214 ..  444230 -  -5.1  -3.57792   TTATCTATTCGGAAA              CGTGCAA TTA TTTCACG              CTTCAACATTCTTAA  57 88
 CX649_02080  443921 ..  443944 -  -5.3  -5.23016   AAATAAGTGAAAAAA          CAGGCAG AATGAAAAGA CTGCCTG           TTTTACATAATTATT  82 36
 CX649_02075  443168 ..  443189 -  -3.7  -4.84761   ATATTCGCATAAAAA           GCACCTC CTGTTCTT AAGGTGC            CCAAAAGGATCAGCT  70 133
 CX649_02070  442708 ..  442728 -  -7.6  -4.37658   AAGTTCTTTATAAAA            CTCGCTCA ATCGG TGAACGAG            TTTTATTTTTTATTG  81 28
        prfA NONE
        prmC NONE
      spoIIR NONE
 CX649_02045  438309 ..  438335 - -16.8  -3.94877   ATTTTTCAAGAACAA         GCTTTATCCACA AAT TGTGGATAAAGC         TGTTGATTGCAGTGG 100 86
 CX649_02040  436820 ..  436871 - -10.3   -3.0094   CTGCAGCCATATAGA TAACCTCCCCCGGACACGCATAT TGAACG ATATGCACGTCAGAGGGACATTA TGACAAAGAATGGCG  80 332
 CX649_02035  436220 ..  436238 -  -5.3  -6.15536   AATTAACAAAAAAAA            GCAC-GTC CAAT GACTGTGC             TCAAATGACTGGTTT  95 56
 CX649_02030 NONE
 CX649_02025 NONE
        rpiB NONE
 CX649_02015  433099 ..  433119 -  -9.1  -4.93877   TTTCACTAAACAAAA            TCGCATCAA AGT TTGATACGA            CTTTTGCTTACAATT 100 171
 CX649_02010  431482 ..  431508 - -10.9  -6.34616   TTAAAATAAAAAAAA         GCGTCCGAAGC ATGTG GCTTCGAACAC         TCAATATTTCCTCAA 100 37
 CX649_02005  430674 ..  430699 -  -8.3  -5.16969   TATACAAAAAAGAAA         GAGAGGGCA CTTCACTT CGCCCTCTC          CTGTTATTTTGTACC  90 29
 CX649_02000  428154 ..  428165 -    -3  -3.56958   TTAATAATATCACAA                TTTG TTCA CAAA                 TATTTTTGGTGTTTC  50 40
 CX649_01995 NONE
 CX649_01990 NONE
 CX649_01985  426600 ..  426614 -  -2.9  -3.27617   TAATAAATTCATGAA               TAAAG TCCTC CTTTA               TTTGTTTAAAGATAA  45 77
 CX649_01980  426234 ..  426269 -  -6.2  -4.28188   CATTCACAACATAAA    GGAATGGCGAAGAT GCTTAAAA AACTTCGCCATTTC     CTCTTTTTCACTTGC  72 140
        atpF NONE
 CX649_01970 NONE
        atpA  423535 ..  423567 -  -9.3  -3.05046   TCATGTTTTGAAAAC      GGCTGTGAAAAGA ATCCCCG TATTTTCACAGCC      TTATCGTTCTTTATT  74 36
 CX649_01960 NONE
        atpD NONE
 CX649_01950  420692 ..  420720 -  -5.2  -5.00884   AGTTTTTTCAAAAAA        GACGGCCCGA ACGGAAATG CCGGGACGTC        TTAAATGAGAAATTA  77 38
 CX649_01945  420067 ..  420085 -  -3.8  -4.61231   GCATACGTGGAAAAA             GTCGTCAA GAT TAGACAAC             AGCCTTTATGTATTC  65 58
 CX649_01940 NONE
        murA  417883 ..  417914 - -12.4  -4.87626   GGGTAATACGAAAAA      GAAGCTAGCATCTC CTAA AAGAGGCTAGCTTC       TTTTGTGAAATTATA 100 36
      spoIID  416667 ..  416697 - -14.2  -4.78326   CCCTAAAGAAACAAA       TGTGAGAAAACCGA TTA CCGATTTTCTCACA       AAACGCACCGATTTT 100 41
 CX649_01920  414994 ..  415011 -  -9.9  -6.53504   TAGACAAAAAAAAAA             CCTACTC GTTT GAGTAGG              ATTGTATTGGTTAAG 100 36
 CX649_01915  414077 ..  414091 -  -7.2  -3.82604   TCATGCAATGAACAA               TTTTCC GCA GGAAAA               TTCAACACCAGTCTA  70 183
 CX649_01910 NONE
 CX649_01905 NONE
 CX649_01900  411014 ..  411038 - -10.8  -5.55855   GTGAAAAAAAGAAAA          CATCTGCTCC TTTTT GGAACAGATG          TCGAGAAATGGAGAA 100 251
     spoIIID  410243 ..  410254 -    -3  -4.09243   TACATCTTTTGAAAA                CATA TTAC TATG                 ATCCTCCCTTGCCAA  57 161
 CX649_01885  409199 ..  409214 -  -6.1  -5.68023   GCACAAGTAAAAAAA              TCGGC GTAAAA GCCGA               TTTCTAAAAAACTTA  88 55
 CX649_01825  390821 ..  390848 - -12.2    -3.745   CTAGCCAGTAAAAGA        TAAAAAGGACCA CGTG CGGTCCTTTTTA         AATATTTATTGGGTG  91 115
 CX649_01810  387744 ..  387761 -  -2.8  -3.15861   TAGCATGGCGATTAA             TACAAA AATCTG TTTGTA              AACCTTAATTGGTCG  45 4
 CX649_01805  387034 ..  387072 -  -4.9  -4.91473   TAATTTAAAAATAAA  GGGGAATAA-AT-AAACAC GCT GTCTTTCATGTTATTCCCC  CATCATATGAGGCCA  75 17
 CX649_01800  385853 ..  385881 - -14.7   -5.4756   AAGCTGAAGAAAAAA        CGGCCAAGCTTTT TTA AAAAGTTTGGCCG        TTAACATTTTTTTTT 100 10
 CX649_01775  380755 ..  380791 - -19.8  -4.07568   GCTGTGTGTTTAAAA    CAAAACGACTGTAACA AAAAA TGTTACAGTCGTTTTG    TTTTTATAGCGAAGA 100 46
 CX649_01720  369495 ..  369528 - -18.5  -5.53436   AGAGAAGAGAAAAAA     TATTCAGGCAATTCT TTTT AGAATTGCCTGAATA      AATTTATTTTACATG 100 29
 CX649_01690 NONE
 CX649_01685 NONE
 CX649_01680  359454 ..  359466 -  -9.1  -4.53036   TGATAAATATGAAAA                GGCGT TTA ACGCC                TCGGGAAGCTCTCAG  93 353
 CX649_01675  358649 ..  358668 -  -7.9  -3.57825   GTTAGAAAACAGTAA            GGATCCT GTTGTT AGGATCC             TTTAGCCGTTTATTT  71 42
 CX649_01670 NONE
 CX649_01665  356838 ..  356854 - -12.3  -4.97957   TATACAATAATAAAA              CCCGATC ATA GATCGGG              TCAATCTGTTTTATT 100 36
 CX649_01655  356107 ..  356127 -  -9.1   -5.2422   AATTATAGCAAAAAA            GAATTGACA CCC TGCCAATTC            TTTGACATGTTTAAT 100 78
 CX649_01650  355136 ..  355186 -  -3.7  -2.88358   AAAGGAGCATAAGGA GCAAAAAGCGCAAG--GATTT GTATATTTTGA AAATCTTCTTACGCTTTTTGC CGGACAGCTGACGCC  46 121
 CX649_01640  354607 ..  354632 -    -9  -5.01732   AATGGTTTCAAAAAA         GTCGGCAGAA GAGGTT TTCTGCCGGC          TTTTTTAATGAAGTA  95 50
        prsA  353413 ..  353439 -  -3.7  -3.94933   TGAATGCTAAAAAGA         GGGGACGAA GCTTTGCTT TTAGTCCCC         CTTTCTTCTATATGT  57 47
 CX649_01605  346781 ..  346818 - -10.7  -5.60993   TTTTCGATAAAAAAA   GTGGATAACTATTGGTA TAAT CACCTTTAGTTATCCAC    ATGTAGTGAAATGGT 100 510
 CX649_01580  343117 ..  343156 -  -7.3  -5.75599   GAAATGATAAAAAAA  TGGAAGCAGACATCTTGA TTCGT TC-GGATGTCTTCTTCCA  ATTTTTTATGCTTCC  93 31
 CX649_01550  335687 ..  335699 -  -3.5   -3.3692   GAGATGAAAGGAATA                TAAAA CTT TTTTA                GCCTACATTCTTGAT  48 141
 CX649_01545  333897 ..  333938 -  -8.9  -4.92756   AGTATTAAAAAGAAA GGGCCC-GCAAAAAGTCAGT TCA ATTAACTTTTTGCAAAGCCC TTTTTTCAATGGTTT  95 144
 CX649_01505  325882 ..  325925 -   -17  -4.13748   TTCAAAAAGATGAAA GGGGGC-GTC-AATAAGCCG ATAAAA CGGCTTATTAGACAGCCCCC GCCATTGTCCGCACA 100 49
 CX649_01500 NONE
 CX649_01495  324664 ..  324689 -  -2.5  -4.16016   TTATCGGTCAATAAA         CATGGCTGATC TGCG AATGAGCCTTG          ATCAGTTATTTTTGA  55 194
 CX649_01490  323727 ..  323781 -  -8.3  -4.64844   CTTATACATAGAAAA CTCCCC-TAAGGTAAAACAGATT TTTTATATTTT AATCTGTCT-ACCTTAAGGGGAG CATATCATGAAAGAT  86 60
 CX649_01485 NONE
 CX649_01480  322933 ..  322943 -    -4  -2.72379   CGAACGTTTTAACCA                 CTTA TAG TAAG                 CAGCTCGTGAAATAC  45 137
 CX649_01475  322061 ..  322083 -    -4  -4.14472   GGAACACCGCGAAAA           GCTTCTTGCA AAA CGCAGGCAGC           TAGATTCATTAATCG  61 469
 CX649_01465  320839 ..  320854 -  -6.2  -2.87132   TTTTTTCTCCACAGA              GAAAAC CTCC GTTTTC               CATTATCGATGTTTT  56 94
 CX649_01460  319835 ..  319859 - -12.9  -4.10007   ATAATTTTTGTAAAA          TCCCGAGGAGA TGG TCTCTTCGGGA          TTCTTATATAAAGGG 100 513
 CX649_01420  312036 ..  312052 -  -3.7   -5.2291   AGATCAGAATAAAAA              TTGTTGC TTT GGAACAA              GCCGCAAAACTTAAC  76 186
 CX649_01405  309463 ..  309473 -  -4.6  -4.75063   AGAAAAGCGGAAAAA                 CGGC TCT ACCG                 GCCGGGTCTGAAGGA  70 125
 CX649_01390  308066 ..  308078 -  -6.3  -4.64598   TAAGTAGTCGAAAAA                TGCAA TAA TTGCA                AGTCTTTGTTTTAAT  76 140
 CX649_01360  300679 ..  300716 -  -6.6  -4.96848   CTTTTCATACAAAAA  CCCCTTAAAAGGGAATGC TTTC ACATTC--TTTTAAGGGG   TGTAAAATTTTATTC  83 35
       yfkAB  292966 ..  292977 -    -3  -4.57341   AATTGTTGTCAAAAA                TGTT ACGC AACA                 AGGCATTGGAGCATG  62 156
 CX649_01305  290095 ..  290116 -    -3  -4.27842   ATGATAAAAGAAGAA           GGACTATC TATTTC GACAATCC            TTTTAAAAAATACTG  60 11
 CX649_01300  287492 ..  287520 - -10.5   -5.7946   GTTTCAACAAAAAAA        TAGAAGCAGAT GATAGAG ATCTGCTTCTA        TTTCATTTTTATGAA 100 154
 CX649_01285  285628 ..  285638 -  -2.6  -3.22521   GGGAGATCAATGCAA                 TTTT ATC AAAA                 AATTCCAATAATTAA  45 464
 CX649_01265  283221 ..  283248 -  -3.6  -5.00895   GTTATTATACAAAAA        GCAGCTT-ATA CTGAATT TATAAAGCTGC        TTTAAAGTAAAAACG  70 379
 CX649_01260  282566 ..  282583 -    -7  -3.95378   GGAGAGTTTAAAGAA             CTTCCC GGGATG GGGAAG              CCTCTCCCGCATGAC  69 352
        thiT  279645 ..  279683 - -16.3  -3.89822   TATTTACCCTATAAA   CAAAATTATCCTCTGCA TGTTT TGCAGAGGATGATTTTG   TTTATTTTACAACCA 100 27
 CX649_01225 NONE
 CX649_01220  274574 ..  274626 -  -4.4  -5.85244   AACCAAAATAAAAAA CCTCAACTAACAACCATGCTAAACG TCATTT CGTT-AGCAAGG--GCTAGTCGAGG ATTTAGGTTTAAATA  91 84
 CX649_01215 NONE
 CX649_01210  273244 ..  273267 - -11.8  -5.28176   TTCACTCATAAAAAA          TCCCTCATGG TTAT CCATAAGGGA           TTTTTTGTATGTGCT 100 167
 CX649_01195  270631 ..  270649 -  -5.2  -3.36823   CTCCTGAAAAGGCAA             TTGCCGGA GCT TCCAGCAC             GCCTATCCTTAAACT  57 66
 CX649_01190 NONE
 CX649_01185  268215 ..  268228 -  -4.5  -2.64062   GAGAGGAATAGGAAT               CCTCC TTAT GGAAG                CTTTGCATTGTCTAT  47 17
 CX649_01180  267124 ..  267159 -  -9.2  -5.61596   ATGTGTATAAAAAAA    GAGGAT-GTATGCTCTT ATC ATGAACATACTATCCTC    TGAAAAATTAATATA 100 128
 CX649_01175  266014 ..  266068 - -10.4  -5.88565   TGCATAACAAAAAAA GAGACTCCAAATATAATGTATATA TCTATTT CATATACATTAAATTTGAGGTCTC TCTATTTGCACCAGT 100 112
 CX649_01170  264320 ..  264332 -  -3.5  -2.73701   GGTGACTAAAGGAAG                TTTTT TTG AAAAA                TTGTTATAAATGTTA  43 65
 CX649_01165 NONE
 CX649_01160 NONE
 CX649_01155 NONE
 CX649_01150 NONE
 CX649_01145  259678 ..  259720 -  -7.1  -5.24129   TGTGTGTATAAAAAA CAGGTGGAGCGTGACAGCTTC GAG GATGA-ATCACG-TCCACCTG GGTTTGAACTTTTTA  89 72
 CX649_01135  257780 ..  257796 -  -2.3  -2.73124   GTTCATTTGTTAAAC              TCCTTTA GTA TAAATGA              TATACGTGTGAGAAG  40 3
 CX649_01130  256671 ..  256697 -  -8.1  -4.92783   AAGGCATTACAAAAA         GCCAATACTTT TCTAC ATAGTATTGGC         TTTTAATCATTGATG  90 28
 CX649_01105  251448 ..  251463 -  -3.2  -3.87869   TTAATGTTTTATAAA              CGTTGA TATA TCGACG               TTTATGATTTTTTGT  52 147
 CX649_01075  242102 ..  242132 - -11.3  -4.37871   CGAAATAAAAGGAAA      CCATCGCCATCCTCA ATT TG-GGA-GGCGATGG      TTTTTTAATGATTTT 100 279
 CX649_01045  235194 ..  235226 - -12.9  -4.22948   AAAATTTATTGAAAA      TGCAGGTTTTCTCCT TAA AACAGAAAACCTGCA      TTTCCTTGTAAACTA 100 368
 CX649_01020  231663 ..  231702 -  -8.1  -2.62513   ATTTTAAAAAATGAG  GGCCATTTCAAACTT TGATAAATGT AAGTTTGAAATGGCT   TTTTGTAATGCGTTT  66 54
 CX649_00970 NONE
 CX649_00965 NONE
 CX649_00960 NONE
 CX649_00955 NONE
 CX649_00950  208338 ..  208373 - -11.4  -5.61596   ATTTGTATAAAAAAA    TGATTGCAAAAGATTT TTCA ATATCCTTTGCAATCA     AAACTTTACTTCGTT 100 44
 CX649_00895  195489 ..  195520 - -12.5  -4.10657   CGATATTCGGCAAAA      GCCCTAAACAATT GTATGG AATCGTTTAGGGC       TAGGAATTTTAGGAG 100 99
 CX649_00890  194229 ..  194240 -    -3  -2.78807   ATTATTGAAAAAATT                CTAA ACAA TTAG                 GAGAGTCTAAACAAT  44 326
 CX649_00885  192851 ..  192876 -  -6.3  -4.29656   CAGAAAACCGCAAAA         GTAATTTGTGT AAAT ATACAAATTAC          TCGACATTCATGCTT  74 22
         ald  191589 ..  191616 - -11.4   -4.7153   AAAGAATCCTAAAAA        CACCCTTCACAGC TAA GC-ATGAAGGGTG        TTTCATCACCGTTTT 100 39
 CX649_00860 NONE
 CX649_00855 NONE
 CX649_00850  183097 ..  183111 -  -4.3  -3.15544   TTCCATTTCGAGTAA               CATTG TATTT CAATG               AATAAATAAACCGTT  51 146
 CX649_00840  180557 ..  180601 - -11.6  -5.59564   ATAAACTTAAAAAAA CCCATCCCAAGAATGCTG GCGTCATAA CAGCATTCTTGGGATTTG TTTGTAAAACATAGA 100 78
 CX649_00715 NONE
 CX649_00710  155965 ..  155989 -  -8.6  -4.24948   CCAGTATACGCAAAA          GAATCCGGCT TGACC AGTCGGATTC          TCAAGTTTTTTAATT  85 41
 CX649_00705  154328 ..  154357 - -14.5  -4.19506   ATGGTAAGCGTAAAA       TAGTCCACACCTA CCTT TAGATGTGGACTA        TTGTTATGATTTATT 100 36
 CX649_00670 NONE
 CX649_00665 NONE
 CX649_00660  143843 ..  143860 -  -4.1  -3.57792   TGAGGGAGCTGGAAA             TCCGTAA AGAT TTTCGGA              GCTCCATCTGCTTTT  55 99
 CX649_00650 NONE
 CX649_00645 NONE
 CX649_00640  140693 ..  140721 -  -7.5  -4.20354   AACGTAAGCGTAAAA        TAATCCCCACCTT TTA ATGATAGGGATTA        AATACTATTATTGTG  78 33
 CX649_00585  125175 ..  125194 -  -9.3  -4.27316   CGCGCCAATTGAAAA            GAGCAGC GAATAG GCTGCTC             TTTACCGTTTTTGAA  93 215
 CX649_00560  120270 ..  120307 -  -8.7  -6.09888   TTTCAATAAAAAAAA   CAGGTGATTTCAAAA AGGGGGGA TTTTGAAATCACCTT    TATAATGATCGTTTT 100 67
 CX649_00400   85054 ..   85082 - -13.9  -4.45083   TTTAGATGCATAAAA        CGCGAGAGAGTTA TAT TAGCTCCCTCGCG        TCGGGCATTCATTCA 100 100
 CX649_00305   65743 ..   65768 -  -9.1  -3.70511   AACAGGATCTAAGAA         GTGATGAGGAA ATAT TTCTTCATCAC          TTTTTAGTTGATGAA  80 206
 CX649_00295   63166 ..   63184 -  -7.4  -4.24786   CTGACAACAGATAAA             CGGGTCAT CTG ATGACCGG             AAAATAGAAATATCT  78 482
 CX649_00290   61686 ..   61729 - -10.6  -4.99043   TCGTGAGAAATAAAA TAAAACCCAGATTATCCACAC GGA ATG-GAATAATCTGGGTTTTG TAATTTTCTTAAGCC 100 34
 CX649_00270   56546 ..   56558 -  -4.8  -3.37513   ATACGGGAAGAGGAA                CGTG GGCAG CACG                GTAACCGTCTTTGTG  55 366
 CX649_00260 NONE
 CX649_00255   53912 ..   53950 - -10.4   -4.2558   TATTTTGGACTAAAA   TCGGAAATACCTCGCAAA ATG TTTGCGAATTCTCTCCGA   TTTTGCACGCTTTTT 100 107
 CX649_00250 NONE
 CX649_00245   52666 ..   52679 -  -6.7  -4.98531   TTTGCAAAGGAAAAA               TGCAG AGTC CTGCA                CTAAATTTTTGTGCA  83 345
 CX649_00205 NONE
 CX649_00200   42480 ..   42507 -  -9.2   -4.0641   TGTCATTCAGACAAA        CTCCCTAGTTTC GAGG AAAACAAGGGAG         TTTTTGTGTGCATAT  85 213
 CX649_00150   31066 ..   31079 -  -2.4  -3.63868   TTTGCAAAATAAAAG               TGCA GAGAAT TGCA                AAATCCTTATGCAGT  47 514
 CX649_00135 NONE
 CX649_00130   26543 ..   26562 -  -2.1  -5.40072   CCCGCTGTAAAAAAA            GGGCA CTTATAAATT TGCCC             TTCATTCATGTGAAT  74 27
 CX649_00125 NONE
 CX649_00120 NONE
 CX649_00115   23382 ..   23399 -  -4.7  -3.15503   TGCCAACATTGAAGA             CGCCTGC CAGT GCGGACG              AACTTGAAAACTTTC  54 187
        nagA   14517 ..   14529 -  -3.4  -3.73953   ACTATTTTTATTAAA                TGGA TGCAG TCCA                CATCTTCATCTAGAT  52 208
 CX649_00065   13231 ..   13248 -  -5.7  -2.99545   TGGATAGATCACATA             TATGTAT ATTT ATACATA              ATTTTGATATAGGTA  54 17
 CX649_00060   11944 ..   11954 -  -2.4  -4.58308   GAGGAATGAAAGAAA                 GCGG AAT CGGC                 CGTGAAGGTGGAGTG  61 132
 CX649_00015     971 ..     991 -  -2.4  -2.64356   GGTAAAATAATATAT            CTGCCGGA TATGG TCCGGTTG            CATTGTTCCTTCCAC   0 464
