locus-tag class description BAE_00080 PF00083 Sugar (and other) transporter BAE_00085 PF11762 L-arabinose isomerase C-terminal domain BAE_00085 PF02610 L-arabinose isomerase BAE_00090 PF00596 Class II Aldolase and Adducin N-terminal domain BAE_00100 PF00392 Bacterial regulatory proteins, gntR family BAE_00110 PF01047 MarR family BAE_00120 PF01380 SIS domain BAE_00125 PF00215 Orotidine 5'-phosphate decarboxylase / HUMPS family BAE_00130 PF01638 HxlR-like helix-turn-helix BAE_00135 PF00135 Carboxylesterase family BAE_00145 PF14176 YxiJ-like protein BAE_00200 PF00905 Penicillin binding protein transpeptidase domain BAE_00205 PF02770 Acyl-CoA dehydrogenase, middle domain BAE_00205 PF08028 Acyl-CoA dehydrogenase, C-terminal domain BAE_00205 PF02771 Acyl-CoA dehydrogenase, N-terminal domain BAE_00210 PF00005 ABC transporter BAE_00215 PF00497 Bacterial extracellular solute-binding proteins, family 3 BAE_00220 PF00528 Binding-protein-dependent transport system inner membrane component BAE_00225 PF00528 Binding-protein-dependent transport system inner membrane component BAE_00230 PF05067 Manganese containing catalase BAE_00235 PF08240 Alcohol dehydrogenase GroES-like domain BAE_00235 PF00107 Zinc-binding dehydrogenase BAE_00250 PF00465 Iron-containing alcohol dehydrogenase BAE_00255 PF01235 Sodium:alanine symporter family BAE_00260 PF03466 LysR substrate binding domain BAE_00260 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family BAE_00275 PF00005 ABC transporter BAE_00280 PF08240 Alcohol dehydrogenase GroES-like domain BAE_00280 PF00107 Zinc-binding dehydrogenase BAE_00285 PF08241 Methyltransferase domain BAE_00295 PF09501 Probable sporulation protein (Bac_small_yrzI) BAE_00300 PF14143 YrhC-like protein BAE_00305 PF01053 Cys/Met metabolism PLP-dependent enzyme BAE_00310 PF00291 Pyridoxal-phosphate dependent enzyme BAE_00315 PF01048 Phosphorylase superfamily BAE_00320 PF13649 Methyltransferase domain BAE_00325 PF10750 Protein of unknown function (DUF2536) BAE_00330 PF07423 Domain of unknown function (DUF1510) BAE_00335 PF00905 Penicillin binding protein transpeptidase domain BAE_00335 PF03717 Penicillin-binding Protein dimerisation domain BAE_00340 PF03449 Transcription elongation factor, N-terminal BAE_00340 PF01272 Transcription elongation factor, GreA/GreB, C-term BAE_00345 PF00485 Phosphoribulokinase / Uridine kinase family BAE_00365 PF02618 YceG-like family BAE_00370 PF02803 Thiolase, C-terminal domain BAE_00370 PF00108 Thiolase, N-terminal domain BAE_00375 PF00501 AMP-binding enzyme BAE_00375 PF13193 AMP-binding enzyme C-terminal domain BAE_00380 PF02632 BioY family BAE_00385 PF06949 Protein of unknown function (DUF1292) BAE_00390 PF03652 Holliday junction resolvase BAE_00395 PF06135 IreB regulatory phosphoprotein BAE_00400 PF01411 tRNA synthetases class II (A) BAE_00400 PF02272 DHHA1 domain BAE_00400 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain BAE_00405 PF01594 AI-2E family transporter BAE_00410 PF00005 ABC transporter BAE_00415 PF00497 Bacterial extracellular solute-binding proteins, family 3 BAE_00420 PF00528 Binding-protein-dependent transport system inner membrane component BAE_00425 PF00528 Binding-protein-dependent transport system inner membrane component BAE_00440 PF05239 PRC-barrel domain BAE_00445 PF18335 ATP-dependent RecD-like DNA helicase SH3 domain BAE_00445 PF13538 UvrD-like helicase C-terminal domain BAE_00445 PF14490 Helix-hairpin-helix containing domain BAE_00450 PF07719 Tetratricopeptide repeat BAE_00450 PF13181 Tetratricopeptide repeat BAE_00460 PF00266 Aminotransferase class-V BAE_00465 PF02082 Transcriptional regulator BAE_00470 PF16193 AAA C-terminal domain BAE_00470 PF12002 MgsA AAA+ ATPase C terminal BAE_00470 PF05496 Holliday junction DNA helicase RuvB P-loop domain BAE_00475 PF00899 ThiF family BAE_00485 PF02938 GAD domain BAE_00485 PF01336 OB-fold nucleic acid binding domain BAE_00485 PF00152 tRNA synthetases class II (D, K and N) BAE_00490 PF03129 Anticodon binding domain BAE_00490 PF13393 Histidyl-tRNA synthetase BAE_00495 PF08239 Bacterial SH3 domain BAE_00495 PF01520 N-acetylmuramoyl-L-alanine amidase BAE_00500 PF02580 D-Tyr-tRNA(Tyr) deacylase BAE_00505 PF02824 TGS domain BAE_00505 PF04607 Region found in RelA / SpoT proteins BAE_00505 PF13291 ACT domain BAE_00510 PF00156 Phosphoribosyl transferase domain BAE_00515 PF17768 RecJ OB domain BAE_00515 PF02272 DHHA1 domain BAE_00515 PF01368 DHH family BAE_00515 PF10141 Single-strand DNA-specific exonuclease, C terminal domain BAE_00520 PF06305 Lipopolysaccharide assembly protein A domain BAE_00525 PF02080 TrkA-C domain BAE_00530 PF07549 SecD/SecF GG Motif BAE_00530 PF02355 Protein export membrane protein BAE_00535 PF13797 Post-transcriptional regulator BAE_00540 PF01943 Polysaccharide biosynthesis protein BAE_00540 PF14667 Polysaccharide biosynthesis C-terminal domain BAE_00545 PF04239 Protein of unknown function (DUF421) BAE_00550 PF12670 Protein of unknown function (DUF3792) BAE_00555 PF02699 Preprotein translocase subunit BAE_00560 PF01702 Queuine tRNA-ribosyltransferase BAE_00565 PF02547 Queuosine biosynthesis protein BAE_00570 PF11146 Protein of unknown function (DUF2905) BAE_00575 PF05496 Holliday junction DNA helicase RuvB P-loop domain BAE_00575 PF05491 RuvB C-terminal winged helix domain BAE_00575 PF17864 RuvB AAA lid domain BAE_00580 PF07499 RuvA, C-terminal domain BAE_00580 PF01330 RuvA N terminal domain BAE_00585 PF08955 BofC C-terminal domain BAE_00585 PF08977 Bypass of Forespore C, N terminal BAE_00600 PF13667 ThiC-associated domain BAE_00600 PF01964 Radical SAM ThiC family BAE_00610 PF09580 Sporulation lipoprotein YhcN/YlaJ (Spore_YhcN_YlaJ) BAE_00615 PF01476 LysM domain BAE_00620 PF02445 Quinolinate synthetase A protein BAE_00625 PF01729 Quinolinate phosphoribosyl transferase, C-terminal domain BAE_00625 PF02749 Quinolinate phosphoribosyl transferase, N-terminal domain BAE_00630 PF00890 FAD binding domain BAE_00630 PF02910 Fumarate reductase flavoprotein C-term BAE_00635 PF00266 Aminotransferase class-V BAE_00640 PF08279 HTH domain BAE_00640 PF02829 3H domain BAE_00645 PF00800 Prephenate dehydratase BAE_00645 PF01842 ACT domain BAE_00650 PF01842 ACT domain BAE_00655 PF01926 50S ribosome-binding GTPase BAE_00655 PF09269 Domain of unknown function (DUF1967) BAE_00655 PF01018 GTP1/OBG BAE_00660 PF14682 Sporulation initiation phospho-transferase B, C-terminal BAE_00660 PF14689 Sensor_kinase_SpoOB-type, alpha-helical domain BAE_00665 PF01016 Ribosomal L27 protein BAE_00670 PF04327 Cysteine protease Prp BAE_00675 PF00829 Ribosomal prokaryotic L21 protein BAE_00680 PF02163 Peptidase family M50 BAE_00685 PF01551 Peptidase family M23 BAE_00690 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain BAE_00695 PF03775 Septum formation inhibitor MinC, C-terminal domain BAE_00700 PF04093 rod shape-determining protein MreD BAE_00705 PF04085 rod shape-determining protein MreC BAE_00715 PF04002 RadC-like JAB domain BAE_00720 PF02545 Maf-like protein BAE_00730 PF01478 Type IV leader peptidase family BAE_00730 PF06750 Bacterial Peptidase A24 N-terminal domain BAE_00735 PF02875 Mur ligase family, glutamate ligase domain BAE_00735 PF08245 Mur ligase middle domain BAE_00740 PF00133 tRNA synthetases class I (I, L, M and V) BAE_00740 PF10458 Valyl tRNA synthetase tRNA binding arm BAE_00740 PF08264 Anticodon-binding domain of tRNA BAE_00755 PF01476 LysM domain BAE_00760 PF00202 Aminotransferase class-III BAE_00765 PF00490 Delta-aminolevulinic acid dehydratase BAE_00770 PF02602 Uroporphyrinogen-III synthase HemD BAE_00775 PF01379 Porphobilinogen deaminase, dipyromethane cofactor binding domain BAE_00775 PF03900 Porphobilinogen deaminase, C-terminal domain BAE_00780 PF01578 Cytochrome C assembly protein BAE_00785 PF00745 Glutamyl-tRNAGlu reductase, dimerisation domain BAE_00785 PF01488 Shikimate / quinate 5-dehydrogenase BAE_00785 PF05201 Glutamyl-tRNAGlu reductase, N-terminal domain BAE_00795 PF01926 50S ribosome-binding GTPase BAE_00800 PF02190 ATP-dependent protease La (LON) substrate-binding domain BAE_00800 PF00004 ATPase family associated with various cellular activities (AAA) BAE_00800 PF05362 Lon protease (S16) C-terminal proteolytic domain BAE_00805 PF05362 Lon protease (S16) C-terminal proteolytic domain BAE_00805 PF00004 ATPase family associated with various cellular activities (AAA) BAE_00810 PF06689 ClpX C4-type zinc finger BAE_00810 PF07724 AAA domain (Cdc48 subfamily) BAE_00810 PF10431 C-terminal, D2-small domain, of ClpB protein BAE_00815 PF05697 Bacterial trigger factor protein (TF) BAE_00815 PF05698 Bacterial trigger factor protein (TF) C-terminus BAE_00815 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase BAE_00825 PF00694 Aconitase C-terminal domain BAE_00830 PF00330 Aconitase family (aconitate hydratase) BAE_00835 PF00180 Isocitrate/isopropylmalate dehydrogenase BAE_00840 PF08502 LeuA allosteric (dimerisation) domain BAE_00840 PF00682 HMGL-like BAE_00845 PF01450 Acetohydroxy acid isomeroreductase, catalytic domain BAE_00845 PF07991 Acetohydroxy acid isomeroreductase, NADPH-binding domain BAE_00850 PF01842 ACT domain BAE_00850 PF10369 Small subunit of acetolactate synthase BAE_00855 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain BAE_00855 PF00205 Thiamine pyrophosphate enzyme, central domain BAE_00855 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain BAE_00860 PF01063 Amino-transferase class IV BAE_00865 PF10282 Lactonase, 7-bladed beta-propeller BAE_00870 PF06803 Protein of unknown function (DUF1232) BAE_00875 PF04914 DltD protein BAE_00880 PF00550 Phosphopantetheine attachment site BAE_00885 PF03062 MBOAT, membrane-bound O-acyltransferase family BAE_00890 PF00501 AMP-binding enzyme BAE_00890 PF13193 AMP-binding enzyme C-terminal domain BAE_00895 PF12459 D-Ala-teichoic acid biosynthesis protein BAE_00930 PF12850 Calcineurin-like phosphoesterase superfamily domain BAE_00935 PF01725 Ham1 family BAE_00940 PF01138 3' exoribonuclease family, domain 1 BAE_00940 PF03725 3' exoribonuclease family, domain 2 BAE_00945 PF10646 Sporulation and spore germination BAE_00950 PF01177 Asp/Glu/Hydantoin racemase BAE_00955 PF01047 MarR family BAE_00960 PF00196 Bacterial regulatory proteins, luxR family BAE_00965 PF03600 Citrate transporter BAE_00970 PF03466 LysR substrate binding domain BAE_00970 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family BAE_00975 PF04303 PrpF protein BAE_00980 PF02237 Biotin protein ligase C terminal domain BAE_00980 PF03099 Biotin/lipoate A/B protein ligase family BAE_00985 PF03061 Thioesterase superfamily BAE_00990 PF13183 4Fe-4S dicluster domain BAE_00990 PF13085 2Fe-2S iron-sulfur cluster binding domain BAE_00995 PF00890 FAD binding domain BAE_00995 PF02910 Fumarate reductase flavoprotein C-term BAE_01000 PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit BAE_01005 PF10702 Protein of unknown function (DUF2507) BAE_01010 PF01842 ACT domain BAE_01010 PF00696 Amino acid kinase family BAE_01010 PF13840 ACT domain BAE_01015 PF08459 UvrC Helix-hairpin-helix N-terminal BAE_01015 PF01541 GIY-YIG catalytic domain BAE_01015 PF02151 UvrB/uvrC motif BAE_01020 PF00085 Thioredoxin BAE_01025 PF06964 Alpha-L-arabinofuranosidase C-terminal domain BAE_01030 PF01012 Electron transfer flavoprotein domain BAE_01030 PF00766 Electron transfer flavoprotein FAD-binding domain BAE_01035 PF01012 Electron transfer flavoprotein domain BAE_01040 PF00378 Enoyl-CoA hydratase/isomerase BAE_01045 PF00440 Bacterial regulatory proteins, tetR family BAE_01045 PF08359 YsiA-like protein, C-terminal region BAE_01050 PF00501 AMP-binding enzyme BAE_01050 PF13193 AMP-binding enzyme C-terminal domain BAE_01060 PF03994 Domain of Unknown Function (DUF350) BAE_01065 PF00488 MutS domain V BAE_01065 PF01713 Smr domain BAE_01070 PF14716 Helix-hairpin-helix domain BAE_01070 PF14791 DNA polymerase beta thumb BAE_01070 PF02811 PHP domain BAE_01075 PF02674 Colicin V production protein BAE_01080 PF05164 Cell division protein ZapA BAE_01085 PF01351 Ribonuclease HII BAE_01085 PF11858 Domain of unknown function (DUF3378) BAE_01090 PF03147 Ferredoxin-fold anticodon binding domain BAE_01090 PF03483 B3/4 domain BAE_01090 PF01588 Putative tRNA binding domain BAE_01090 PF03484 tRNA synthetase B5 domain BAE_01090 PF17759 Phenylalanyl tRNA synthetase beta chain CLM domain BAE_01095 PF01409 tRNA synthetases class II core domain (F) BAE_01095 PF02912 Aminoacyl tRNA synthetase class II, N-terminal domain BAE_01100 PF08032 RNA 2'-O ribose methyltransferase substrate binding BAE_01100 PF00588 SpoU rRNA Methylase family BAE_01105 PF14098 Small, acid-soluble spore protein I BAE_01110 PF13722 5TM C-terminal transporter carbon starvation CstA BAE_01110 PF02554 Carbon starvation protein CstA BAE_01115 PF05343 M42 glutamyl aminopeptidase BAE_01125 PF06961 Protein of unknown function (DUF1294) BAE_01130 PF00453 Ribosomal protein L20 BAE_01135 PF01632 Ribosomal protein L35 BAE_01140 PF00707 Translation initiation factor IF-3, C-terminal domain BAE_01140 PF05198 Translation initiation factor IF-3, N-terminal domain BAE_01155 PF08447 PAS fold BAE_01155 PF13426 PAS domain BAE_01155 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain BAE_01160 PF03129 Anticodon binding domain BAE_01160 PF02824 TGS domain BAE_01160 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) BAE_01160 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain BAE_01170 PF08812 YtxC-like family BAE_01175 PF09335 SNARE associated Golgi protein BAE_01180 PF01695 IstB-like ATP binding protein BAE_01180 PF07319 Primosomal protein DnaI N-terminus BAE_01185 PF07261 Replication initiation and membrane attachment BAE_01190 PF03477 ATP cone domain BAE_01200 PF02675 S-adenosylmethionine decarboxylase BAE_01205 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain BAE_01205 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain BAE_01210 PF01121 Dephospho-CoA kinase BAE_01215 PF02659 Putative manganese efflux pump BAE_01220 PF06827 Zinc finger found in FPG and IleRS BAE_01220 PF06831 Formamidopyrimidine-DNA glycosylase H2TH domain BAE_01220 PF01149 Formamidopyrimidine-DNA glycosylase N-terminal domain BAE_01225 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain BAE_01225 PF01367 5'-3' exonuclease, C-terminal SAM fold BAE_01225 PF00476 DNA polymerase family A BAE_01230 PF16736 Single Cache-like BAE_01230 PF00989 PAS fold BAE_01230 PF00512 His Kinase A (phospho-acceptor) domain BAE_01230 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BAE_01235 PF00486 Transcriptional regulatory protein, C terminal BAE_01235 PF00072 Response regulator receiver domain BAE_01240 PF00056 lactate/malate dehydrogenase, NAD binding domain BAE_01240 PF02866 lactate/malate dehydrogenase, alpha/beta C-terminal domain BAE_01245 PF00180 Isocitrate/isopropylmalate dehydrogenase BAE_01250 PF00285 Citrate synthase, C-terminal domain BAE_01255 PF04284 Protein of unknown function (DUF441) BAE_01260 PF01594 AI-2E family transporter BAE_01265 PF04186 FxsA cytoplasmic membrane protein BAE_01270 PF00391 PEP-utilising enzyme, mobile domain BAE_01270 PF02887 Pyruvate kinase, alpha/beta domain BAE_01270 PF00224 Pyruvate kinase, barrel domain BAE_01275 PF00365 Phosphofructokinase BAE_01280 PF03255 Acetyl co-enzyme A carboxylase carboxyltransferase alpha subunit BAE_01285 PF17848 Acetyl-coA carboxylase zinc finger domain BAE_01285 PF01039 Carboxyl transferase domain BAE_01290 PF03949 Malic enzyme, NAD binding domain BAE_01290 PF00390 Malic enzyme, N-terminal domain BAE_01295 PF07733 Bacterial DNA polymerase III alpha NTPase domain BAE_01295 PF01336 OB-fold nucleic acid binding domain BAE_01295 PF14579 Helix-hairpin-helix motif BAE_01295 PF02811 PHP domain BAE_01295 PF17657 Bacterial DNA polymerase III alpha subunit finger domain BAE_01300 PF14034 Sporulation protein YtrH BAE_01315 PF01368 DHH family BAE_01315 PF02272 DHHA1 domain BAE_01320 PF14007 YtpI-like protein BAE_01330 PF07085 DRTGG domain BAE_01330 PF03061 Thioesterase superfamily BAE_01330 PF00571 CBS domain BAE_01330 PF00392 Bacterial regulatory proteins, gntR family BAE_01350 PF00206 Lyase BAE_01350 PF14698 Argininosuccinate lyase C-terminal BAE_01355 PF00764 Arginosuccinate synthase BAE_01360 PF00994 Probable molybdopterin binding domain BAE_01365 PF00871 Acetokinase family BAE_01370 PF02384 N-6 DNA Methylase BAE_01375 PF08534 Redoxin BAE_01380 PF09579 Sporulation protein YtfJ (Spore_YtfJ) BAE_01385 PF11167 Protein of unknown function (DUF2953) BAE_01390 PF06271 RDD family BAE_01395 PF01343 Peptidase family S49 BAE_01400 PF01513 ATP-NAD kinase BAE_01405 PF03880 DbpA RNA binding domain BAE_01405 PF00270 DEAD/DEAH box helicase BAE_01405 PF00271 Helicase conserved C-terminal domain BAE_01410 PF00487 Fatty acid desaturase BAE_01415 PF07730 Histidine kinase BAE_01420 PF00072 Response regulator receiver domain BAE_01420 PF00196 Bacterial regulatory proteins, luxR family BAE_01425 PF01497 Periplasmic binding protein BAE_01430 PF00486 Transcriptional regulatory protein, C terminal BAE_01430 PF00072 Response regulator receiver domain BAE_01435 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BAE_01440 PF01098 Cell cycle protein BAE_01445 PF03551 Transcriptional regulator PadR-like family BAE_01450 PF00005 ABC transporter BAE_01455 PF02687 FtsX-like permease family BAE_01460 PF01979 Amidohydrolase family BAE_01465 PF02525 Flavodoxin-like fold BAE_01485 PF01810 LysE type translocator BAE_01490 PF13193 AMP-binding enzyme C-terminal domain BAE_01490 PF00501 AMP-binding enzyme BAE_01495 PF00269 Small, acid-soluble spore proteins, alpha/beta type BAE_01500 PF02926 THUMP domain BAE_01500 PF02568 Thiamine biosynthesis protein (ThiI) BAE_01505 PF00266 Aminotransferase class-V BAE_01510 PF05525 Branched-chain amino acid transport protein BAE_01515 PF05525 Branched-chain amino acid transport protein BAE_01520 PF06160 Septation ring formation regulator, EzrA BAE_01525 PF02811 PHP domain BAE_01530 PF00440 Bacterial regulatory proteins, tetR family BAE_01535 PF13185 GAF domain BAE_01540 PF01479 S4 domain BAE_01540 PF00163 Ribosomal protein S4/S9 N-terminal domain BAE_01555 PF00857 Isochorismatase family BAE_01565 PF18766 SWI2/SNF2 ATPase BAE_01565 PF12008 Type I restriction and modification enzyme - subunit R C terminal BAE_01565 PF04313 Type I restriction enzyme R protein N terminus (HSDR_N) BAE_01575 PF12161 HsdM N-terminal domain BAE_01575 PF02384 N-6 DNA Methylase BAE_01585 PF01674 Lipase (class 2) BAE_01590 PF03992 Antibiotic biosynthesis monooxygenase BAE_01595 PF00579 tRNA synthetases class I (W and Y) BAE_01595 PF01479 S4 domain BAE_01600 PF00501 AMP-binding enzyme BAE_01600 PF13193 AMP-binding enzyme C-terminal domain BAE_01605 PF00583 Acetyltransferase (GNAT) family BAE_01610 PF00571 CBS domain BAE_01615 PF00850 Histone deacetylase domain BAE_01620 PF00356 Bacterial regulatory proteins, lacI family BAE_01625 PF01817 Chorismate mutase type II BAE_01625 PF00793 DAHP synthetase I family BAE_01630 PF11009 Protein of unknown function (DUF2847) BAE_01635 PF12732 YtxH-like protein BAE_01640 PF06103 Bacterial protein of unknown function (DUF948) BAE_01645 PF08245 Mur ligase middle domain BAE_01645 PF01225 Mur ligase family, catalytic domain BAE_01645 PF02875 Mur ligase family, glutamate ligase domain BAE_01650 PF01580 FtsK/SpoIIIE family BAE_01650 PF09397 Ftsk gamma domain BAE_01650 PF17854 FtsK alpha domain BAE_01655 PF01588 Putative tRNA binding domain BAE_01655 PF14794 Domain of unknown function (DUF4479) BAE_01660 PF07285 Protein of unknown function (DUF1444) BAE_01665 PF00085 Thioredoxin BAE_01675 PF11071 Nucleoside 2-deoxyribosyltransferase YtoQ BAE_01680 PF05343 M42 glutamyl aminopeptidase BAE_01685 PF03413 Peptidase propeptide and YPEB domain BAE_01690 PF00390 Malic enzyme, N-terminal domain BAE_01690 PF03949 Malic enzyme, NAD binding domain BAE_01695 PF00753 Metallo-beta-lactamase superfamily BAE_01700 PF02390 Putative methyltransferase BAE_01705 PF14165 YtzH-like protein BAE_01710 PF01636 Phosphotransferase enzyme family BAE_01715 PF00781 Diacylglycerol kinase catalytic domain BAE_01730 PF00291 Pyridoxal-phosphate dependent enzyme BAE_01735 PF03575 Peptidase family S51 BAE_01740 PF01546 Peptidase family M20/M25/M40 BAE_01745 PF00860 Permease family BAE_01750 PF08220 DeoR-like helix-turn-helix domain BAE_01755 PF00849 RNA pseudouridylate synthase BAE_01755 PF01479 S4 domain BAE_01760 PF14667 Polysaccharide biosynthesis C-terminal domain BAE_01760 PF01943 Polysaccharide biosynthesis protein BAE_01775 PF02028 BCCT, betaine/carnitine/choline family transporter BAE_01780 PF03691 Uncharacterised protein family (UPF0167) BAE_01785 PF10957 Sporulation protein Cse60 BAE_01790 PF00581 Rhodanese-like domain BAE_01795 PF04854 Protein of unknown function, DUF624 BAE_01800 PF01408 Oxidoreductase family, NAD-binding Rossmann fold BAE_01800 PF02894 Oxidoreductase family, C-terminal alpha/beta domain BAE_01810 PF07470 Glycosyl Hydrolase Family 88 BAE_01815 PF00528 Binding-protein-dependent transport system inner membrane component BAE_01820 PF12833 Helix-turn-helix domain BAE_01820 PF17853 GGDEF-like domain BAE_01825 PF01638 HxlR-like helix-turn-helix BAE_01830 PF07690 Major Facilitator Superfamily BAE_01835 PF00248 Aldo/keto reductase family BAE_01840 PF13416 Bacterial extracellular solute-binding protein BAE_01845 PF00528 Binding-protein-dependent transport system inner membrane component BAE_01850 PF01370 NAD dependent epimerase/dehydratase family BAE_01855 PF01738 Dienelactone hydrolase family BAE_01860 PF00133 tRNA synthetases class I (I, L, M and V) BAE_01860 PF09334 tRNA synthetases class I (M) BAE_01860 PF08264 Anticodon-binding domain of tRNA BAE_01860 PF13603 Leucyl-tRNA synthetase, Domain 2 BAE_01865 PF14074 Protein of unknown function (DUF4257) BAE_01870 PF01740 STAS domain BAE_01870 PF13426 PAS domain BAE_01880 PF04791 LMBR1-like membrane protein BAE_01885 PF02687 FtsX-like permease family BAE_01885 PF12704 MacB-like periplasmic core domain BAE_01890 PF00005 ABC transporter BAE_01900 PF00005 ABC transporter BAE_01905 PF00392 Bacterial regulatory proteins, gntR family BAE_01915 PF10732 Protein of unknown function (DUF2524) BAE_01920 PF04055 Radical SAM superfamily BAE_01920 PF16199 Radical_SAM C-terminal domain BAE_01925 PF06962 Putative rRNA methylase BAE_01930 PF07070 SpoOM protein BAE_01935 PF10776 Protein of unknown function (DUF2600) BAE_01940 PF12146 Serine aminopeptidase, S33 BAE_01945 PF00132 Bacterial transferase hexapeptide (six repeats) BAE_01950 PF00733 Asparagine synthase BAE_01950 PF13537 Glutamine amidotransferase domain BAE_01955 PF00438 S-adenosylmethionine synthetase, N-terminal domain BAE_01955 PF02772 S-adenosylmethionine synthetase, central domain BAE_01955 PF02773 S-adenosylmethionine synthetase, C-terminal domain BAE_01960 PF01293 Phosphoenolpyruvate carboxykinase BAE_01965 PF10763 Protein of unknown function (DUF2584) BAE_01970 PF00326 Prolyl oligopeptidase family BAE_01975 PF01593 Flavin containing amine oxidoreductase BAE_01980 PF00535 Glycosyl transferase family 2 BAE_02000 PF00005 ABC transporter BAE_02005 PF00528 Binding-protein-dependent transport system inner membrane component BAE_02010 PF00293 NUDIX domain BAE_02015 PF02342 TerD domain BAE_02030 PF05105 Bacteriophage holin family BAE_02040 PF00210 Ferritin-like domain BAE_02050 PF13115 YtkA-like BAE_02055 PF02664 S-Ribosylhomocysteinase (LuxS) BAE_02060 PF01809 Putative membrane protein insertion efficiency factor BAE_02065 PF00484 Carbonic anhydrase BAE_02070 PF09223 ZinT (YodA) periplasmic lipocalin-like zinc-recruitment BAE_02070 PF01297 Zinc-uptake complex component A periplasmic BAE_02075 PF01197 Ribosomal protein L31 BAE_02085 PF01654 Cytochrome bd terminal oxidase subunit I BAE_02090 PF02322 Cytochrome bd terminal oxidase subunit II BAE_02095 PF07561 Domain of Unknown Function (DUF1540) BAE_02105 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain BAE_02105 PF13378 Enolase C-terminal domain-like BAE_02110 PF00501 AMP-binding enzyme BAE_02110 PF13193 AMP-binding enzyme C-terminal domain BAE_02115 PF00378 Enoyl-CoA hydratase/isomerase BAE_02120 PF00561 alpha/beta hydrolase fold BAE_02125 PF16582 Middle domain of thiamine pyrophosphate BAE_02125 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain BAE_02125 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain BAE_02130 PF00425 chorismate binding enzyme BAE_02135 PF01040 UbiA prenyltransferase family BAE_02140 PF01258 Prokaryotic dksA/traR C4-type zinc finger BAE_02145 PF03073 TspO/MBR family BAE_02270 PF09515 Thiamine transporter protein (Thia_YuaJ) BAE_02280 PF00583 Acetyltransferase (GNAT) family BAE_02285 PF06803 Protein of unknown function (DUF1232) BAE_02290 PF01098 Cell cycle protein BAE_02295 PF01098 Cell cycle protein BAE_02300 PF15975 Flotillin BAE_02300 PF01145 SPFH domain / Band 7 family BAE_02310 PF12867 DinB superfamily BAE_02315 PF00465 Iron-containing alcohol dehydrogenase BAE_02340 PF01510 N-acetylmuramoyl-L-alanine amidase BAE_02340 PF01471 Putative peptidoglycan binding domain BAE_02345 PF04688 SPP1 phage holin BAE_02350 PF10960 BhlA holin family BAE_02375 PF09693 Phage uncharacterised protein (Phage_XkdX) BAE_02380 PF09636 XkdW protein BAE_02395 PF10076 Uncharacterised protein conserved in bacteria (DUF2313) BAE_02400 PF04865 Baseplate J-like protein BAE_02405 PF10934 Protein of unknown function (DUF2634) BAE_02410 PF10844 Protein of unknown function (DUF2577) BAE_02420 PF01476 LysM domain BAE_02425 PF01464 Transglycosylase SLT domain BAE_02425 PF01464 Transglycosylase SLT domain BAE_02435 PF08890 Phage XkdN-like tail assembly chaperone protein, TAC BAE_02445 PF09393 Phage tail tube protein BAE_02450 PF17481 Phage tail sheath protein beta-sandwich domain BAE_02450 PF17482 Phage tail sheath C-terminal domain BAE_02450 PF04984 Phage tail sheath protein subtilisin-like domain BAE_02465 PF04883 Bacteriophage HK97-gp10, putative tail-component BAE_02470 PF12206 Domain of unknown function (DUF3599) BAE_02475 PF11436 Protein of unknown function (DUF3199) BAE_02480 PF05065 Phage capsid family BAE_02485 PF14550 Putative phage serine protease XkdF BAE_02490 PF04860 Phage portal protein BAE_02495 PF04466 Phage terminase large subunit BAE_02495 PF17288 Terminase RNAseH like domain BAE_02500 PF10668 Phage terminase small subunit BAE_02505 PF08281 Sigma-70, region 4 BAE_02510 PF17356 Phage-like element PBSX protein XtrA BAE_02515 PF05866 Endodeoxyribonuclease RusA BAE_02530 PF01381 Helix-turn-helix BAE_02540 PF06968 Biotin and Thiamin Synthesis associated domain BAE_02540 PF04055 Radical SAM superfamily BAE_02550 PF02673 Bacitracin resistance protein BacA BAE_02555 PF01594 AI-2E family transporter BAE_02565 PF01408 Oxidoreductase family, NAD-binding Rossmann fold BAE_02565 PF02894 Oxidoreductase family, C-terminal alpha/beta domain BAE_02570 PF01965 DJ-1/PfpI family BAE_02575 PF02743 Cache domain BAE_02575 PF00672 HAMP domain BAE_02575 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain BAE_02580 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain BAE_02580 PF02743 Cache domain BAE_02580 PF00672 HAMP domain BAE_02585 PF00672 HAMP domain BAE_02585 PF02743 Cache domain BAE_02585 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain BAE_02590 PF02743 Cache domain BAE_02590 PF00672 HAMP domain BAE_02590 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain BAE_02605 PF03060 Nitronate monooxygenase BAE_02610 PF01894 Uncharacterised protein family UPF0047 BAE_02615 PF01595 Cyclin M transmembrane N-terminal domain BAE_02615 PF03471 Transporter associated domain BAE_02615 PF00571 CBS domain BAE_02620 PF04298 Putative neutral zinc metallopeptidase BAE_02630 PF02254 TrkA-N domain BAE_02630 PF07885 Ion channel BAE_02635 PF08868 YugN-like family BAE_02645 PF00342 Phosphoglucose isomerase BAE_02650 PF00465 Iron-containing alcohol dehydrogenase BAE_02655 PF00465 Iron-containing alcohol dehydrogenase BAE_02660 PF04070 Domain of unknown function (DUF378) BAE_02665 PF00575 S1 RNA binding domain BAE_02670 PF00155 Aminotransferase class I and II BAE_02675 PF01037 Lrp/AsnC ligand binding domain BAE_02680 PF08386 TAP-like protein BAE_02680 PF00561 alpha/beta hydrolase fold BAE_02685 PF08958 Domain of unknown function (DUF1871) BAE_02690 PF00155 Aminotransferase class I and II BAE_02695 PF00512 His Kinase A (phospho-acceptor) domain BAE_02695 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BAE_02700 PF08810 Kinase associated protein B BAE_02705 PF00929 Exonuclease BAE_02710 PF07690 Major Facilitator Superfamily BAE_02715 PF00905 Penicillin binding protein transpeptidase domain BAE_02715 PF00912 Transglycosylase BAE_02720 PF04134 Protein of unknown function, DUF393 BAE_02725 PF17328 Family of unknown function (DUF5366) BAE_02730 PF00989 PAS fold BAE_02730 PF14689 Sensor_kinase_SpoOB-type, alpha-helical domain BAE_02730 PF17203 Single cache domain 3 BAE_02730 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BAE_02735 PF00072 Response regulator receiver domain BAE_02760 PF03390 2-hydroxycarboxylate transporter family BAE_02770 PF00361 Proton-conducting membrane transporter BAE_02770 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus BAE_02770 PF13244 Domain of unknown function (DUF4040) BAE_02775 PF04039 Domain related to MnhB subunit of Na+/H+ antiporter BAE_02780 PF00420 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L BAE_02785 PF00361 Proton-conducting membrane transporter BAE_02790 PF01899 Na+/H+ ion antiporter subunit BAE_02795 PF04066 Multiple resistance and pH regulation protein F (MrpF / PhaF) BAE_02800 PF03334 Na+/H+ antiporter subunit BAE_02805 PF03061 Thioesterase superfamily BAE_02810 PF00196 Bacterial regulatory proteins, luxR family BAE_02810 PF00072 Response regulator receiver domain BAE_02815 PF07730 Histidine kinase BAE_02815 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BAE_02825 PF00348 Polyprenyl synthetase BAE_02830 PF08181 DegQ (SacQ) family BAE_02840 PF00563 EAL domain BAE_02840 PF08668 HDOD domain BAE_02845 PF17767 Nicotinate phosphoribosyltransferase (NAPRTase) N-terminal domain BAE_02845 PF17956 Nicotinate phosphoribosyltransferase C-terminal domain BAE_02845 PF04095 Nicotinate phosphoribosyltransferase (NAPRTase) family BAE_02850 PF00857 Isochorismatase family BAE_02855 PF07997 Protein of unknown function (DUF1694) BAE_02860 PF14166 YueH-like protein BAE_02865 PF10676 Spore germination protein gerPA/gerPF BAE_02870 PF10676 Spore germination protein gerPA/gerPF BAE_02875 PF01594 AI-2E family transporter BAE_02880 PF10842 Protein of unknown function (DUF2642) BAE_02890 PF01966 HD domain BAE_02895 PF00106 short chain dehydrogenase BAE_02900 PF17355 Family of unknown function (DUF5383) BAE_02910 PF12538 DNA transporter BAE_02910 PF01580 FtsK/SpoIIIE family BAE_02915 PF10140 WXG100 protein secretion system (Wss), protein YukC BAE_02920 PF08817 WXG100 protein secretion system (Wss), protein YukD BAE_02925 PF06013 Proteins of 100 residues with WXG BAE_02930 PF17853 GGDEF-like domain BAE_02930 PF13556 PucR C-terminal helix-turn-helix domain BAE_02930 PF06018 CodY GAF-like domain BAE_02935 PF01262 Alanine dehydrogenase/PNT, C-terminal domain BAE_02935 PF05222 Alanine dehydrogenase/PNT, N-terminal domain BAE_02940 PF02632 BioY family BAE_02945 PF03553 Na+/H+ antiporter family BAE_02945 PF13726 Na+-H+ antiporter family BAE_02950 PF02789 Cytosol aminopeptidase family, N-terminal domain BAE_02950 PF00883 Cytosol aminopeptidase family, catalytic domain BAE_02955 PF02681 Divergent PAP2 family BAE_02960 PF06725 3D domain BAE_02965 PF14068 Putative membrane protein BAE_02970 PF07992 Pyridine nucleotide-disulphide oxidoreductase BAE_02975 PF07992 Pyridine nucleotide-disulphide oxidoreductase BAE_02990 PF01521 Iron-sulphur cluster biosynthesis BAE_02995 PF01678 Diaminopimelate epimerase BAE_03000 PF07293 Protein of unknown function (DUF1450) BAE_03005 PF07992 Pyridine nucleotide-disulphide oxidoreductase BAE_03015 PF07315 Protein of unknown function (DUF1462) BAE_03020 PF01106 NifU-like domain BAE_03025 PF07676 WD40-like Beta Propeller Repeat BAE_03025 PF00326 Prolyl oligopeptidase family BAE_03030 PF00288 GHMP kinases N terminal domain BAE_03030 PF08544 GHMP kinases C terminal BAE_03035 PF00291 Pyridoxal-phosphate dependent enzyme BAE_03040 PF03447 Homoserine dehydrogenase, NAD binding domain BAE_03040 PF00742 Homoserine dehydrogenase BAE_03040 PF01842 ACT domain BAE_03045 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain BAE_03045 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain BAE_03055 PF04608 Phosphatidylglycerophosphatase A BAE_03060 PF13344 Haloacid dehalogenase-like hydrolase BAE_03065 PF01934 Protein of unknown function DUF86 BAE_03070 PF06265 Protein of unknown function (DUF1027) BAE_03075 PF09580 Sporulation lipoprotein YhcN/YlaJ (Spore_YhcN_YlaJ) BAE_03080 PF16881 N-terminal domain of lipoyl synthase of Radical_SAM family BAE_03080 PF04055 Radical SAM superfamily BAE_03085 PF01551 Peptidase family M23 BAE_03095 PF10903 Protein of unknown function (DUF2691) BAE_03100 PF09560 Sporulation protein YunB (Spo_YunB) BAE_03105 PF08827 Domain of unknown function (DUF1805) BAE_03110 PF02872 5'-nucleotidase, C-terminal domain BAE_03115 PF01904 Protein of unknown function DUF72 BAE_03120 PF07905 Purine catabolism regulatory protein-like family BAE_03120 PF13556 PucR C-terminal helix-turn-helix domain BAE_03120 PF17853 GGDEF-like domain BAE_03125 PF00190 Cupin BAE_03130 PF07690 Major Facilitator Superfamily BAE_03135 PF00266 Aminotransferase class-V BAE_03140 PF04231 Endonuclease I BAE_03150 PF01032 FecCD transport family BAE_03155 PF01032 FecCD transport family BAE_03160 PF01497 Periplasmic binding protein BAE_03170 PF07859 alpha/beta hydrolase fold BAE_03175 PF06146 Phosphate-starvation-inducible E BAE_03180 PF00512 His Kinase A (phospho-acceptor) domain BAE_03185 PF00486 Transcriptional regulatory protein, C terminal BAE_03185 PF00072 Response regulator receiver domain BAE_03190 PF04235 Protein of unknown function (DUF418) BAE_03200 PF02525 Flavodoxin-like fold BAE_03205 PF08338 Domain of unknown function (DUF1731) BAE_03205 PF01370 NAD dependent epimerase/dehydratase family BAE_03210 PF00440 Bacterial regulatory proteins, tetR family BAE_03210 PF18665 Tetracyclin repressor-like, C-terminal domain BAE_03215 PF01458 Uncharacterized protein family (UPF0051) BAE_03220 PF01592 NifU-like N terminal domain BAE_03225 PF00266 Aminotransferase class-V BAE_03230 PF01458 Uncharacterized protein family (UPF0051) BAE_03235 PF00005 ABC transporter BAE_03240 PF02627 Carboxymuconolactone decarboxylase family BAE_03245 PF03180 NLPA lipoprotein BAE_03250 PF00528 Binding-protein-dependent transport system inner membrane component BAE_03255 PF09383 NIL domain BAE_03255 PF00005 ABC transporter BAE_03260 PF02036 SCP-2 sterol transfer family BAE_03265 PF00085 Thioredoxin BAE_03270 PF01751 Toprim domain BAE_03275 PF10830 Protein of unknown function (DUF2553) BAE_03280 PF01597 Glycine cleavage H-protein BAE_03285 PF03960 ArsC family BAE_03290 PF00441 Acyl-CoA dehydrogenase, C-terminal domain BAE_03290 PF02771 Acyl-CoA dehydrogenase, N-terminal domain BAE_03290 PF02770 Acyl-CoA dehydrogenase, middle domain BAE_03295 PF02803 Thiolase, C-terminal domain BAE_03295 PF00108 Thiolase, N-terminal domain BAE_03300 PF00378 Enoyl-CoA hydratase/isomerase BAE_03300 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain BAE_03300 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain BAE_03305 PF14115 YuzL-like protein BAE_03315 PF07875 Coat F domain BAE_03320 PF10835 Protein of unknown function (DUF2573) BAE_03325 PF00005 ABC transporter BAE_03335 PF00106 short chain dehydrogenase BAE_03340 PF13180 PDZ domain BAE_03345 PF00486 Transcriptional regulatory protein, C terminal BAE_03345 PF00072 Response regulator receiver domain BAE_03350 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BAE_03350 PF00512 His Kinase A (phospho-acceptor) domain BAE_03350 PF00672 HAMP domain BAE_03355 PF00440 Bacterial regulatory proteins, tetR family BAE_03365 PF00206 Lyase BAE_03365 PF10415 Fumarase C C-terminus BAE_03370 PF13113 Protein of unknown function (DUF3970) BAE_03375 PF03323 Bacillus/Clostridium GerA spore germination protein BAE_03380 PF03845 Spore germination protein BAE_03385 PF05504 Spore germination B3/ GerAC like, C-terminal BAE_03395 PF00072 Response regulator receiver domain BAE_03395 PF00196 Bacterial regulatory proteins, luxR family BAE_03400 PF00672 HAMP domain BAE_03400 PF07730 Histidine kinase BAE_03400 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BAE_03405 PF09922 Cell wall-active antibiotics response 4TMS YvqF BAE_03415 PF04012 PspA/IM30 family BAE_03425 PF01923 Cobalamin adenosyltransferase BAE_03435 PF04166 Pyridoxal phosphate biosynthetic protein PdxA BAE_03440 PF07005 Sugar-binding N-terminal domain BAE_03440 PF17042 Nucleotide-binding C-terminal domain BAE_03445 PF01590 GAF domain BAE_03445 PF00158 Sigma-54 interaction domain BAE_03460 PF00465 Iron-containing alcohol dehydrogenase BAE_03465 PF00701 Dihydrodipicolinate synthetase family BAE_03470 PF00005 ABC transporter BAE_03475 PF01032 FecCD transport family BAE_03480 PF01497 Periplasmic binding protein BAE_03485 PF00295 Glycosyl hydrolases family 28 BAE_03490 PF04295 D-galactarate dehydratase / Altronate hydrolase, C terminus BAE_03490 PF08666 SAF domain BAE_03495 PF08125 Mannitol dehydrogenase C-terminal domain BAE_03495 PF01232 Mannitol dehydrogenase Rossmann domain BAE_03500 PF00356 Bacterial regulatory proteins, lacI family BAE_03505 PF02614 Glucuronate isomerase BAE_03510 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BAE_03510 PF00512 His Kinase A (phospho-acceptor) domain BAE_03515 PF00072 Response regulator receiver domain BAE_03515 PF00486 Transcriptional regulatory protein, C terminal BAE_03520 PF00005 ABC transporter BAE_03525 PF01032 FecCD transport family BAE_03530 PF01032 FecCD transport family BAE_03535 PF01497 Periplasmic binding protein BAE_03540 PF13520 Amino acid permease BAE_03550 PF09575 Small spore protein J (Spore_SspJ) BAE_03560 PF04307 LexA-binding, inner membrane-associated putative hydrolase BAE_03565 PF00884 Sulfatase BAE_03575 PF00528 Binding-protein-dependent transport system inner membrane component BAE_03585 PF00248 Aldo/keto reductase family BAE_03590 PF00480 ROK family BAE_03595 PF00999 Sodium/hydrogen exchanger family BAE_03600 PF03458 UPF0126 domain BAE_03605 PF02600 Disulfide bond formation protein DsbB BAE_03610 PF13462 Thioredoxin BAE_03615 PF00403 Heavy-metal-associated domain BAE_03620 PF00005 ABC transporter BAE_03625 PF00950 ABC 3 transport family BAE_03630 PF01297 Zinc-uptake complex component A periplasmic BAE_03640 PF13977 BetI-type transcriptional repressor, C-terminal BAE_03640 PF00440 Bacterial regulatory proteins, tetR family BAE_03645 PF08664 YcbB domain BAE_03645 PF00072 Response regulator receiver domain BAE_03650 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BAE_03655 PF00206 Lyase BAE_03655 PF10415 Fumarase C C-terminus BAE_03660 PF00375 Sodium:dicarboxylate symporter family BAE_03665 PF00403 Heavy-metal-associated domain BAE_03670 PF00403 Heavy-metal-associated domain BAE_03675 PF02583 Metal-sensitive transcriptional repressor BAE_03685 PF00990 Diguanylate cyclase, GGDEF domain BAE_03685 PF00072 Response regulator receiver domain BAE_03710 PF01668 SmpB protein BAE_03715 PF08206 Ribonuclease B OB domain BAE_03715 PF00773 RNB domain BAE_03715 PF00575 S1 RNA binding domain BAE_03715 PF17876 Cold shock domain BAE_03720 PF12146 Serine aminopeptidase, S33 BAE_03725 PF03840 Preprotein translocase SecG subunit BAE_03730 PF18277 AbrB C-terminal domain BAE_03730 PF04014 Antidote-toxin recognition MazE, bacterial antitoxin BAE_03735 PF01381 Helix-turn-helix BAE_03750 PF01638 HxlR-like helix-turn-helix BAE_03755 PF00528 Binding-protein-dependent transport system inner membrane component BAE_03760 PF04069 Substrate binding domain of ABC-type glycine betaine transport system BAE_03765 PF00528 Binding-protein-dependent transport system inner membrane component BAE_03770 PF00571 CBS domain BAE_03770 PF00005 ABC transporter BAE_03775 PF12802 MarR family BAE_03780 PF01914 MarC family integral membrane protein BAE_03790 PF00583 Acetyltransferase (GNAT) family BAE_03810 PF00005 ABC transporter BAE_03820 PF03952 Enolase, N-terminal domain BAE_03820 PF00113 Enolase, C-terminal TIM barrel domain BAE_03825 PF06415 BPG-independent PGAM N-terminus (iPGM_N) BAE_03825 PF01676 Metalloenzyme superfamily BAE_03830 PF00121 Triosephosphate isomerase BAE_03835 PF00162 Phosphoglycerate kinase BAE_03840 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain BAE_03840 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain BAE_03845 PF04198 Putative sugar-binding domain BAE_03850 PF00324 Amino acid permease BAE_03855 PF00202 Aminotransferase class-III BAE_03860 PF13426 PAS domain BAE_03860 PF00158 Sigma-54 interaction domain BAE_03860 PF02954 Bacterial regulatory protein, Fis family BAE_03865 PF00392 Bacterial regulatory proteins, gntR family BAE_03865 PF07729 FCD domain BAE_03870 PF00309 Sigma-54 factor, Activator interacting domain (AID) BAE_03870 PF04552 Sigma-54, DNA binding domain BAE_03870 PF04963 Sigma-54 factor, core binding domain BAE_03875 PF09628 YvfG protein BAE_03880 PF01554 MatE BAE_03885 PF00005 ABC transporter BAE_03885 PF08352 Oligopeptide/dipeptide transporter, C-terminal region BAE_03890 PF08352 Oligopeptide/dipeptide transporter, C-terminal region BAE_03890 PF00005 ABC transporter BAE_03895 PF00528 Binding-protein-dependent transport system inner membrane component BAE_03900 PF00528 Binding-protein-dependent transport system inner membrane component BAE_03905 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle BAE_03910 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family BAE_03915 PF17836 PglD N-terminal domain BAE_03915 PF00132 Bacterial transferase hexapeptide (six repeats) BAE_03920 PF02397 Bacterial sugar transferase BAE_03925 PF14667 Polysaccharide biosynthesis C-terminal domain BAE_03925 PF01943 Polysaccharide biosynthesis protein BAE_03930 PF04230 Polysaccharide pyruvyl transferase BAE_03935 PF00535 Glycosyl transferase family 2 BAE_03945 PF13439 Glycosyltransferase Family 4 BAE_03945 PF00534 Glycosyl transferases group 1 BAE_03950 PF00535 Glycosyl transferase family 2 BAE_03955 PF13439 Glycosyltransferase Family 4 BAE_03955 PF00534 Glycosyl transferases group 1 BAE_03960 PF02719 Polysaccharide biosynthesis protein BAE_03965 PF13614 AAA domain BAE_03970 PF02706 Chain length determinant protein BAE_03975 PF08671 Anti-repressor SinI BAE_03975 PF01381 Helix-turn-helix BAE_03985 PF01497 Periplasmic binding protein BAE_03990 PF01032 FecCD transport family BAE_03995 PF01032 FecCD transport family BAE_04000 PF11738 Protein of unknown function (DUF3298) BAE_04000 PF01522 Polysaccharide deacetylase BAE_04000 PF13739 Deacetylase PdaC BAE_04010 PF00005 ABC transporter BAE_04015 PF00005 ABC transporter BAE_04020 PF00528 Binding-protein-dependent transport system inner membrane component BAE_04020 PF12911 N-terminal TM domain of oligopeptide transport permease C BAE_04025 PF00528 Binding-protein-dependent transport system inner membrane component BAE_04030 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle BAE_04035 PF00201 UDP-glucoronosyl and UDP-glucosyl transferase BAE_04040 PF01497 Periplasmic binding protein BAE_04060 PF13784 Fic/DOC family N-terminal BAE_04060 PF02661 Fic/DOC family BAE_04080 PF08863 YolD-like protein BAE_04095 PF01510 N-acetylmuramoyl-L-alanine amidase BAE_04095 PF01471 Putative peptidoglycan binding domain BAE_04130 PF01832 Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase BAE_04130 PF13457 GW (Gly-Tryp) dipeptide domain BAE_04210 PF00589 Phage integrase family BAE_04295 PF02511 Thymidylate synthase complementing protein BAE_04310 PF00692 dUTPase BAE_04320 PF00268 Ribonucleotide reductase, small chain BAE_04325 PF08343 Ribonucleotide reductase N-terminal BAE_04325 PF02867 Ribonucleotide reductase, barrel domain BAE_04325 PF00317 Ribonucleotide reductase, all-alpha domain BAE_04330 PF07972 NrdI Flavodoxin like BAE_04350 PF02075 Crossover junction endodeoxyribonuclease RuvC BAE_04485 PF00589 Phage integrase family BAE_04485 PF02899 Phage integrase, N-terminal SAM-like domain BAE_04495 PF00574 Clp protease BAE_04500 PF03641 Possible lysine decarboxylase BAE_04505 PF03819 MazG nucleotide pyrophosphohydrolase domain BAE_04510 PF01740 STAS domain BAE_04510 PF00916 Sulfate permease family BAE_04515 PF00484 Carbonic anhydrase BAE_04520 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain BAE_04520 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain BAE_04525 PF00545 ribonuclease BAE_04535 PF00797 N-acetyltransferase BAE_04540 PF00381 PTS HPr component phosphorylation site BAE_04545 PF10298 WhiA N-terminal LAGLIDADG-like domain BAE_04545 PF14527 WhiA LAGLIDADG-like domain BAE_04545 PF02650 WhiA C-terminal HTH domain BAE_04550 PF01933 Uncharacterised protein family UPF0052 BAE_04555 PF03668 P-loop ATPase protein family BAE_04560 PF00293 NUDIX domain BAE_04565 PF07992 Pyridine nucleotide-disulphide oxidoreductase BAE_04570 PF00877 NlpC/P60 family BAE_04580 PF01503 Phosphoribosyl-ATP pyrophosphohydrolase BAE_04580 PF01502 Phosphoribosyl-AMP cyclohydrolase BAE_04585 PF00977 Histidine biosynthesis protein BAE_04590 PF00977 Histidine biosynthesis protein BAE_04595 PF00117 Glutamine amidotransferase class-I BAE_04600 PF00475 Imidazoleglycerol-phosphate dehydratase BAE_04605 PF00815 Histidinol dehydrogenase BAE_04610 PF01634 ATP phosphoribosyltransferase BAE_04615 PF13393 Histidyl-tRNA synthetase BAE_04620 PF13529 Peptidase_C39 like family BAE_04630 PF13460 NAD(P)H-binding BAE_04635 PF02082 Transcriptional regulator BAE_04640 PF14602 Hexapeptide repeat of succinyl-transferase BAE_04645 PF13419 Haloacid dehalogenase-like hydrolase BAE_04650 PF07670 Nucleoside recognition BAE_04655 PF01790 Prolipoprotein diacylglyceryl transferase BAE_04660 PF02603 HPr Serine kinase N terminus BAE_04660 PF07475 HPr Serine kinase C-terminal domain BAE_04665 PF01979 Amidohydrolase family BAE_04670 PF01182 Glucosamine-6-phosphate isomerases/6-phosphogluconolactonase BAE_04680 PF00149 Calcineurin-like phosphoesterase BAE_04685 PF04020 Mycobacterial 4 TMS phage holin, superfamily IV BAE_04690 PF04024 PspC domain BAE_04695 PF13349 Putative adhesin BAE_04710 PF17760 UvrA interaction domain BAE_04710 PF00005 ABC transporter BAE_04710 PF17755 UvrA DNA-binding domain BAE_04715 PF17757 UvrB interaction domain BAE_04715 PF12344 Ultra-violet resistance protein B BAE_04715 PF02151 UvrB/uvrC motif BAE_04715 PF04851 Type III restriction enzyme, res subunit BAE_04715 PF00271 Helicase conserved C-terminal domain BAE_04720 PF09964 Uncharacterized protein conserved in bacteria (DUF2198) BAE_04725 PF00391 PEP-utilising enzyme, mobile domain BAE_04725 PF01326 Pyruvate phosphate dikinase, PEP/pyruvate binding domain BAE_04730 PF00440 Bacterial regulatory proteins, tetR family BAE_04735 PF07690 Major Facilitator Superfamily BAE_04745 PF00486 Transcriptional regulatory protein, C terminal BAE_04745 PF00072 Response regulator receiver domain BAE_04750 PF16736 Single Cache-like BAE_04750 PF00512 His Kinase A (phospho-acceptor) domain BAE_04750 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BAE_04750 PF00989 PAS fold BAE_04755 PF13231 Dolichyl-phosphate-mannose-protein mannosyltransferase BAE_04760 PF00535 Glycosyl transferase family 2 BAE_04765 PF00324 Amino acid permease BAE_04770 PF00881 Nitroreductase family BAE_04775 PF01638 HxlR-like helix-turn-helix BAE_04780 PF17820 PDZ domain BAE_04785 PF17423 Swarming motility protein BAE_04790 PF01471 Putative peptidoglycan binding domain BAE_04790 PF03572 Peptidase family S41 BAE_04790 PF17820 PDZ domain BAE_04795 PF01925 Sulfite exporter TauE/SafE BAE_04800 PF00877 NlpC/P60 family BAE_04805 PF02687 FtsX-like permease family BAE_04805 PF18075 FtsX extracellular domain BAE_04810 PF00005 ABC transporter BAE_04815 PF13442 Cytochrome C oxidase, cbb3-type, subunit III BAE_04820 PF10035 Uncharacterized protein conserved in bacteria (DUF2179) BAE_04820 PF02588 Uncharacterised 5xTM membrane BCR, YitT family COG1284 BAE_04845 PF02810 SEC-C motif BAE_04845 PF01043 SecA preprotein cross-linking domain BAE_04845 PF07516 SecA Wing and Scaffold domain BAE_04845 PF07517 SecA DEAD-like domain BAE_04850 PF02482 Sigma 54 modulation protein / S30EA ribosomal protein BAE_04850 PF16321 Sigma 54 modulation/S30EA ribosomal protein C terminus BAE_04855 PF02743 Cache domain BAE_04855 PF00672 HAMP domain BAE_04855 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain BAE_04870 PF02561 Flagellar protein FliS BAE_04875 PF07196 Flagellin hook IN motif BAE_04875 PF07195 Flagellar hook-associated protein 2 C-terminus BAE_04875 PF02465 Flagellar hook-associated protein 2 N-terminus BAE_04880 PF03646 FlaG protein BAE_04885 PF02599 Global regulator protein family BAE_04890 PF02623 FliW protein BAE_04900 PF00700 Bacterial flagellin C-terminal helical region BAE_04900 PF00669 Bacterial flagellin N-terminal helical region BAE_04905 PF00460 Flagella basal body rod protein BAE_04905 PF06429 Flagellar basal body rod FlgEFG protein C-terminal BAE_04910 PF05130 FlgN protein BAE_04930 PF10719 Late competence development protein ComFB BAE_04935 PF00271 Helicase conserved C-terminal domain BAE_04935 PF04851 Type III restriction enzyme, res subunit BAE_04940 PF02645 Uncharacterised protein, DegV family COG1307 BAE_04945 PF00072 Response regulator receiver domain BAE_04945 PF00196 Bacterial regulatory proteins, luxR family BAE_04950 PF07730 Histidine kinase BAE_04950 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BAE_04950 PF05384 Sensor protein DegS BAE_04955 PF01205 Uncharacterized protein family UPF0029 BAE_04955 PF09186 Domain of unknown function (DUF1949) BAE_04960 PF03816 Cell envelope-related transcriptional attenuator domain BAE_04965 PF00953 Glycosyl transferase family 4 BAE_04975 PF00535 Glycosyl transferase family 2 BAE_04980 PF02706 Chain length determinant protein BAE_04985 PF04932 O-Antigen ligase BAE_04990 PF16363 GDP-mannose 4,6 dehydratase BAE_04995 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain BAE_04995 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain BAE_04995 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain BAE_05000 PF00534 Glycosyl transferases group 1 BAE_05000 PF13439 Glycosyltransferase Family 4 BAE_05005 PF14667 Polysaccharide biosynthesis C-terminal domain BAE_05005 PF01943 Polysaccharide biosynthesis protein BAE_05010 PF02397 Bacterial sugar transferase BAE_05020 PF01520 N-acetylmuramoyl-L-alanine amidase BAE_05020 PF04122 Putative cell wall binding repeat 2 BAE_05025 PF04122 Putative cell wall binding repeat 2 BAE_05025 PF01520 N-acetylmuramoyl-L-alanine amidase BAE_05030 PF04122 Putative cell wall binding repeat 2 BAE_05030 PF08486 Stage II sporulation protein BAE_05040 PF03816 Cell envelope-related transcriptional attenuator domain BAE_05045 PF02350 UDP-N-acetylglucosamine 2-epimerase BAE_05050 PF00483 Nucleotidyl transferase BAE_05055 PF00005 ABC transporter BAE_05060 PF01061 ABC-2 type transporter BAE_05070 PF04464 CDP-Glycerol:Poly(glycerophosphate) glycerophosphotransferase BAE_05080 PF01467 Cytidylyltransferase-like BAE_05085 PF03808 Glycosyl transferase WecB/TagA/CpsF family BAE_05090 PF04464 CDP-Glycerol:Poly(glycerophosphate) glycerophosphotransferase BAE_05095 PF01832 Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase BAE_05095 PF08239 Bacterial SH3 domain BAE_05095 PF05036 Sporulation related domain BAE_05100 PF01238 Phosphomannose isomerase type I BAE_05105 PF00528 Binding-protein-dependent transport system inner membrane component BAE_05110 PF00528 Binding-protein-dependent transport system inner membrane component BAE_05115 PF01547 Bacterial extracellular solute-binding protein BAE_05120 PF00196 Bacterial regulatory proteins, luxR family BAE_05120 PF00072 Response regulator receiver domain BAE_05125 PF02743 Cache domain BAE_05125 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BAE_05125 PF06580 Histidine kinase BAE_05125 PF00672 HAMP domain BAE_05135 PF00583 Acetyltransferase (GNAT) family BAE_05140 PF01081 KDPG and KHG aldolase BAE_05145 PF00294 pfkB family carbohydrate kinase BAE_05150 PF00356 Bacterial regulatory proteins, lacI family BAE_05155 PF04962 KduI/IolB family BAE_05165 PF03323 Bacillus/Clostridium GerA spore germination protein BAE_05170 PF03845 Spore germination protein BAE_05175 PF05504 Spore germination B3/ GerAC like, C-terminal BAE_05185 PF00535 Glycosyl transferase family 2 BAE_05185 PF00534 Glycosyl transferases group 1 BAE_05190 PF00083 Sugar (and other) transporter BAE_05195 PF03816 Cell envelope-related transcriptional attenuator domain BAE_05205 PF00877 NlpC/P60 family BAE_05210 PF09587 Bacterial capsule synthesis protein PGA_cap BAE_05215 PF14102 Capsule biosynthesis CapC BAE_05220 PF08245 Mur ligase middle domain BAE_05225 PF03323 Bacillus/Clostridium GerA spore germination protein BAE_05235 PF05504 Spore germination B3/ GerAC like, C-terminal BAE_05240 PF00356 Bacterial regulatory proteins, lacI family BAE_05245 PF00294 pfkB family carbohydrate kinase BAE_05250 PF05025 RbsD / FucU transport protein family BAE_05255 PF00005 ABC transporter BAE_05260 PF02653 Branched-chain amino acid transport system / permease component BAE_05265 PF13407 Periplasmic binding protein domain BAE_05270 PF01613 Flavin reductase like domain BAE_05275 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family BAE_05275 PF03466 LysR substrate binding domain BAE_05280 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain BAE_05280 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain BAE_05280 PF00205 Thiamine pyrophosphate enzyme, central domain BAE_05285 PF03306 Alpha-acetolactate decarboxylase BAE_05290 PF13404 AsnC-type helix-turn-helix domain BAE_05290 PF01037 Lrp/AsnC ligand binding domain BAE_05295 PF02417 Chromate transporter BAE_05300 PF02417 Chromate transporter BAE_05305 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain BAE_05305 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain BAE_05305 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain BAE_05310 PF04434 SWIM zinc finger BAE_05315 PF00271 Helicase conserved C-terminal domain BAE_05315 PF12419 SNF2 Helicase protein BAE_05315 PF00176 SNF2 family N-terminal domain BAE_05320 PF01740 STAS domain BAE_05320 PF13426 PAS domain BAE_05335 PF14183 YwpF-like protein BAE_05340 PF01741 Large-conductance mechanosensitive channel, MscL BAE_05345 PF07977 FabA-like domain BAE_05350 PF18801 response regulator aspartate phosphatase H, N terminal BAE_05355 PF06429 Flagellar basal body rod FlgEFG protein C-terminal BAE_05355 PF00460 Flagella basal body rod protein BAE_05360 PF06429 Flagellar basal body rod FlgEFG protein C-terminal BAE_05360 PF00460 Flagella basal body rod protein BAE_05370 PF12116 Stage III sporulation protein D BAE_05375 PF01047 MarR family BAE_05380 PF07690 Major Facilitator Superfamily BAE_05385 PF01569 PAP2 superfamily BAE_05390 PF07690 Major Facilitator Superfamily BAE_05395 PF00497 Bacterial extracellular solute-binding proteins, family 3 BAE_05400 PF00528 Binding-protein-dependent transport system inner membrane component BAE_05405 PF00005 ABC transporter BAE_05410 PF00909 Ammonium Transporter Family BAE_05415 PF00543 Nitrogen regulatory protein P-II BAE_05420 PF01551 Peptidase family M23 BAE_05425 PF00583 Acetyltransferase (GNAT) family BAE_05440 PF00005 ABC transporter BAE_05465 PF00471 Ribosomal protein L33 BAE_05470 PF02492 CobW/HypB/UreG, nucleotide-binding domain BAE_05470 PF07683 Cobalamin synthesis protein cobW C-terminal domain BAE_05475 PF00253 Ribosomal protein S14p/S29e BAE_05480 PF06463 Molybdenum Cofactor Synthesis C BAE_05480 PF04055 Radical SAM superfamily BAE_05485 PF02634 FdhD/NarQ family BAE_05490 PF07690 Major Facilitator Superfamily BAE_05495 PF00384 Molybdopterin oxidoreductase BAE_05500 PF00092 von Willebrand factor type A domain BAE_05505 PF00092 von Willebrand factor type A domain BAE_05510 PF08486 Stage II sporulation protein BAE_05515 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) BAE_05520 PF08680 TATA-box binding BAE_05525 PF06612 Protein of unknown function (DUF1146) BAE_05535 PF02823 ATP synthase, Delta/Epsilon chain, beta-sandwich domain BAE_05535 PF00401 ATP synthase, Delta/Epsilon chain, long alpha-helix domain BAE_05540 PF02874 ATP synthase alpha/beta family, beta-barrel domain BAE_05540 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain BAE_05545 PF00231 ATP synthase BAE_05550 PF02874 ATP synthase alpha/beta family, beta-barrel domain BAE_05550 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain BAE_05550 PF00306 ATP synthase alpha/beta chain, C terminal domain BAE_05555 PF00213 ATP synthase delta (OSCP) subunit BAE_05560 PF00430 ATP synthase B/B' CF(0) BAE_05565 PF00137 ATP synthase subunit C BAE_05570 PF00119 ATP synthase A chain BAE_05575 PF03899 ATP synthase I chain BAE_05585 PF00464 Serine hydroxymethyltransferase BAE_05590 PF04260 Protein of unknown function (DUF436) BAE_05595 PF02502 Ribose/Galactose Isomerase BAE_05600 PF01451 Low molecular weight phosphotyrosine protein phosphatase BAE_05605 PF02659 Putative manganese efflux pump BAE_05610 PF01300 Telomere recombination BAE_05610 PF03481 Putative GTP-binding controlling metal-binding BAE_05620 PF09551 Stage II sporulation protein R (spore_II_R) BAE_05630 PF05175 Methyltransferase small domain BAE_05630 PF17827 PrmC N-terminal domain BAE_05635 PF00472 RF-1 domain BAE_05635 PF03462 PCRF domain BAE_05640 PF13411 MerR HTH family regulatory protein BAE_05645 PF03547 Membrane transport protein BAE_05650 PF00390 Malic enzyme, N-terminal domain BAE_05650 PF03949 Malic enzyme, NAD binding domain BAE_05655 PF00265 Thymidine kinase BAE_05660 PF01197 Ribosomal protein L31 BAE_05665 PF07498 Rho termination factor, N-terminal domain BAE_05665 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain BAE_05665 PF07497 Rho termination factor, RNA-binding domain BAE_05670 PF03320 Bacterial fructose-1,6-bisphosphatase, glpX-encoded BAE_05675 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) BAE_05680 PF00923 Transaldolase/Fructose-6-phosphate aldolase BAE_05685 PF01116 Fructose-bisphosphate aldolase class-II BAE_05690 PF00072 Response regulator receiver domain BAE_05695 PF10740 Domain of unknown function (DUF2529) BAE_05700 PF00117 Glutamine amidotransferase class-I BAE_05700 PF06418 CTP synthase N-terminus BAE_05705 PF05066 HB1, ASXL, restriction endonuclease HTH domain BAE_05720 PF00441 Acyl-CoA dehydrogenase, C-terminal domain BAE_05720 PF02770 Acyl-CoA dehydrogenase, middle domain BAE_05720 PF02771 Acyl-CoA dehydrogenase, N-terminal domain BAE_05725 PF00441 Acyl-CoA dehydrogenase, C-terminal domain BAE_05725 PF02770 Acyl-CoA dehydrogenase, middle domain BAE_05725 PF02771 Acyl-CoA dehydrogenase, N-terminal domain BAE_05730 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain BAE_05730 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain BAE_05735 PF02803 Thiolase, C-terminal domain BAE_05735 PF00108 Thiolase, N-terminal domain BAE_05740 PF13183 4Fe-4S dicluster domain BAE_05740 PF02754 Cysteine-rich domain BAE_05745 PF13091 PLD-like domain BAE_05750 PF03851 UV-endonuclease UvdE BAE_05765 PF17676 LD-carboxypeptidase C-terminal domain BAE_05765 PF02016 LD-carboxypeptidase N-terminal domain BAE_05775 PF00664 ABC transporter transmembrane region BAE_05775 PF00005 ABC transporter BAE_05780 PF13091 PLD-like domain BAE_05780 PF13396 Phospholipase_D-nuclease N-terminal BAE_05785 PF17676 LD-carboxypeptidase C-terminal domain BAE_05785 PF02016 LD-carboxypeptidase N-terminal domain BAE_05790 PF03485 Arginyl tRNA synthetase N terminal domain BAE_05790 PF00750 tRNA synthetases class I (R) BAE_05790 PF05746 DALR anticodon binding domain BAE_05795 PF09148 Domain of unknown function (DUF1934) BAE_05805 PF00491 Arginase family BAE_05810 PF17284 Spermidine synthase tetramerisation domain BAE_05815 PF00912 Transglycosylase BAE_05815 PF00905 Penicillin binding protein transpeptidase domain BAE_05820 PF08741 YwhD family BAE_05825 PF02163 Peptidase family M50 BAE_05830 PF01361 Tautomerase enzyme BAE_05845 PF01966 HD domain BAE_05850 PF07293 Protein of unknown function (DUF1450) BAE_05865 PF07238 PilZ domain BAE_05865 PF00535 Glycosyl transferase family 2 BAE_05875 PF03099 Biotin/lipoate A/B protein ligase family BAE_05900 PF04740 LXG domain of WXG superfamily BAE_05900 PF14449 Pre-toxin TG BAE_05930 PF03737 Aldolase/RraA BAE_05940 PF01515 Phosphate acetyl/butaryl transferase BAE_05950 PF07690 Major Facilitator Superfamily BAE_05955 PF01037 Lrp/AsnC ligand binding domain BAE_05960 PF07690 Major Facilitator Superfamily BAE_05970 PF07883 Cupin domain BAE_05985 PF00155 Aminotransferase class I and II BAE_05995 PF00908 dTDP-4-dehydrorhamnose 3,5-epimerase BAE_06000 PF04321 RmlD substrate binding domain BAE_06005 PF16363 GDP-mannose 4,6 dehydratase BAE_06010 PF00483 Nucleotidyl transferase BAE_06015 PF04101 Glycosyltransferase family 28 C-terminal domain BAE_06020 PF02348 Cytidylyltransferase BAE_06025 PF08666 SAF domain BAE_06025 PF03102 NeuB family BAE_06030 PF00583 Acetyltransferase (GNAT) family BAE_06035 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family BAE_06040 PF04464 CDP-Glycerol:Poly(glycerophosphate) glycerophosphotransferase BAE_06045 PF00535 Glycosyl transferase family 2 BAE_06055 PF09671 Spore coat protein (Spore_GerQ) BAE_06065 PF04241 Protein of unknown function (DUF423) BAE_06070 PF00860 Permease family BAE_06075 PF17261 Family of unknown function (DUF5327) BAE_06080 PF00171 Aldehyde dehydrogenase family BAE_06085 PF03167 Uracil DNA glycosylase superfamily BAE_06090 PF00535 Glycosyl transferase family 2 BAE_06100 PF08543 Phosphomethylpyrimidine kinase BAE_06115 PF00251 Glycosyl hydrolases family 32 N-terminal domain BAE_06115 PF08244 Glycosyl hydrolases family 32 C terminal BAE_06120 PF02378 Phosphotransferase system, EIIC BAE_06120 PF00367 phosphotransferase system, EIIB BAE_06125 PF03123 CAT RNA binding domain BAE_06125 PF00874 PRD domain BAE_06135 PF02225 PA domain BAE_06135 PF00082 Subtilase family BAE_06135 PF13860 FlgD Ig-like domain BAE_06135 PF05922 Peptidase inhibitor I9 BAE_06145 PF00296 Luciferase-like monooxygenase BAE_06150 PF00881 Nitroreductase family BAE_06155 PF01098 Cell cycle protein BAE_06160 PF17368 Spore morphogenesis and germination YwcE BAE_06165 PF03626 Prokaryotic Cytochrome C oxidase subunit IV BAE_06170 PF00510 Cytochrome c oxidase subunit III BAE_06175 PF00115 Cytochrome C and Quinol oxidase polypeptide I BAE_06180 PF02790 Cytochrome C oxidase subunit II, transmembrane domain BAE_06180 PF00116 Cytochrome C oxidase subunit II, periplasmic domain BAE_06190 PF01087 Galactose-1-phosphate uridyl transferase, N-terminal domain BAE_06190 PF02744 Galactose-1-phosphate uridyl transferase, C-terminal domain BAE_06195 PF16363 GDP-mannose 4,6 dehydratase BAE_06200 PF10509 Galactokinase galactose-binding signature BAE_06200 PF08544 GHMP kinases C terminal BAE_06200 PF00288 GHMP kinases N terminal domain BAE_06215 PF04138 GtrA-like protein BAE_06235 PF04341 Protein of unknown function, DUF485 BAE_06240 PF00474 Sodium:solute symporter family BAE_06255 PF02581 Thiamine monophosphate synthase BAE_06260 PF02110 Hydroxyethylthiazole kinase family BAE_06265 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family BAE_06265 PF03466 LysR substrate binding domain BAE_06270 PF03788 LrgA family BAE_06275 PF04172 LrgB-like family BAE_06280 PF17785 PUA-like domain BAE_06280 PF10672 S-adenosylmethionine-dependent methyltransferase BAE_06285 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily BAE_06290 PF00005 ABC transporter BAE_06295 PF00528 Binding-protein-dependent transport system inner membrane component BAE_06300 PF00497 Bacterial extracellular solute-binding proteins, family 3 BAE_06305 PF18801 response regulator aspartate phosphatase H, N terminal BAE_06310 PF04607 Region found in RelA / SpoT proteins BAE_06315 PF02653 Branched-chain amino acid transport system / permease component BAE_06320 PF00005 ABC transporter BAE_06325 PF13407 Periplasmic binding protein domain BAE_06330 PF13229 Right handed beta helix region BAE_06335 PF01063 Amino-transferase class IV BAE_06350 PF11975 Family 4 glycosyl hydrolase C-terminal domain BAE_06350 PF02056 Family 4 glycosyl hydrolase BAE_06355 PF02255 PTS system, Lactose/Cellobiose specific IIA subunit BAE_06360 PF02378 Phosphotransferase system, EIIC BAE_06365 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit BAE_06370 PF00874 PRD domain BAE_06370 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 BAE_06370 PF05043 Mga helix-turn-helix domain BAE_06370 PF08279 HTH domain BAE_06385 PF00208 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase BAE_06385 PF02812 Glu/Leu/Phe/Val dehydrogenase, dimerisation domain BAE_06400 PF08281 Sigma-70, region 4 BAE_06400 PF04542 Sigma-70 region 2 BAE_06405 PF00544 Pectate lyase BAE_06410 PF00005 ABC transporter BAE_06410 PF00664 ABC transporter transmembrane region BAE_06415 PF00664 ABC transporter transmembrane region BAE_06415 PF00005 ABC transporter BAE_06420 PF02322 Cytochrome bd terminal oxidase subunit II BAE_06425 PF01654 Cytochrome bd terminal oxidase subunit I BAE_06430 PF00005 ABC transporter BAE_06435 PF01032 FecCD transport family BAE_06440 PF01497 Periplasmic binding protein BAE_06445 PF04203 Sortase domain BAE_06450 PF00005 ABC transporter BAE_06455 PF01032 FecCD transport family BAE_06460 PF01497 Periplasmic binding protein BAE_06470 PF05031 Iron Transport-associated domain BAE_06475 PF05031 Iron Transport-associated domain BAE_06480 PF01638 HxlR-like helix-turn-helix BAE_06485 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily BAE_06490 PF00925 GTP cyclohydrolase II BAE_06490 PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase BAE_06495 PF01872 RibD C-terminal domain BAE_06495 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region BAE_06505 PF01522 Polysaccharide deacetylase BAE_06510 PF02255 PTS system, Lactose/Cellobiose specific IIA subunit BAE_06515 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit BAE_06520 PF00232 Glycosyl hydrolase family 1 BAE_06530 PF02378 Phosphotransferase system, EIIC BAE_06535 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 BAE_06535 PF00874 PRD domain BAE_06535 PF05043 Mga helix-turn-helix domain BAE_06535 PF08279 HTH domain BAE_06560 PF03553 Na+/H+ antiporter family BAE_06565 PF10415 Fumarase C C-terminus BAE_06565 PF00206 Lyase BAE_06570 PF00710 Asparaginase, N-terminal BAE_06570 PF17763 Glutaminase/Asparaginase C-terminal domain BAE_06575 PF01381 Helix-turn-helix BAE_06585 PF17353 Family of unknown function (DUF5381) BAE_06600 PF06013 Proteins of 100 residues with WXG BAE_06605 PF07687 Peptidase dimerisation domain BAE_06605 PF01546 Peptidase family M20/M25/M40 BAE_06620 PF01418 Helix-turn-helix domain, rpiR family BAE_06620 PF01380 SIS domain BAE_06625 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase BAE_06625 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase BAE_06635 PF02447 GntP family permease BAE_06640 PF01717 Cobalamin-independent synthase, Catalytic domain BAE_06645 PF00232 Glycosyl hydrolase family 1 BAE_06650 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 BAE_06650 PF00367 phosphotransferase system, EIIB BAE_06650 PF02378 Phosphotransferase system, EIIC BAE_06655 PF03123 CAT RNA binding domain BAE_06655 PF00874 PRD domain BAE_06660 PF09234 Domain of unknown function (DUF1963) BAE_06670 PF02361 Cobalt transport protein BAE_06675 PF00005 ABC transporter BAE_06680 PF09819 ABC-type cobalt transport system, permease component BAE_06685 PF03070 TENA/THI-4/PQQC family BAE_06710 PF05547 Immune inhibitor A peptidase M6 BAE_06710 PF00801 PKD domain BAE_06715 PF03992 Antibiotic biosynthesis monooxygenase BAE_06720 PF00881 Nitroreductase family BAE_06725 PF01047 MarR family BAE_06735 PF07831 Pyrimidine nucleoside phosphorylase C-terminal domain BAE_06735 PF00591 Glycosyl transferase family, a/b domain BAE_06735 PF02885 Glycosyl transferase family, helical bundle domain BAE_06740 PF01773 Na+ dependent nucleoside transporter N-terminus BAE_06740 PF07662 Na+ dependent nucleoside transporter C-terminus BAE_06745 PF01791 DeoC/LacD family aldolase BAE_06750 PF04198 Putative sugar-binding domain BAE_06760 PF01757 Acyltransferase family BAE_06765 PF07690 Major Facilitator Superfamily BAE_06770 PF01488 Shikimate / quinate 5-dehydrogenase BAE_06770 PF05201 Glutamyl-tRNAGlu reductase, N-terminal domain BAE_06770 PF00745 Glutamyl-tRNAGlu reductase, dimerisation domain BAE_06775 PF13649 Methyltransferase domain BAE_06780 PF00072 Response regulator receiver domain BAE_06780 PF00196 Bacterial regulatory proteins, luxR family BAE_06790 PF13411 MerR HTH family regulatory protein BAE_06795 PF01408 Oxidoreductase family, NAD-binding Rossmann fold BAE_06805 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain BAE_06810 PF00324 Amino acid permease BAE_06815 PF08713 DNA alkylation repair enzyme BAE_06820 PF02447 GntP family permease BAE_06825 PF02782 FGGY family of carbohydrate kinases, C-terminal domain BAE_06825 PF00370 FGGY family of carbohydrate kinases, N-terminal domain BAE_06830 PF01418 Helix-turn-helix domain, rpiR family BAE_06830 PF01380 SIS domain BAE_06835 PF01156 Inosine-uridine preferring nucleoside hydrolase BAE_06870 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family BAE_06870 PF03466 LysR substrate binding domain BAE_06875 PF00356 Bacterial regulatory proteins, lacI family BAE_06880 PF13416 Bacterial extracellular solute-binding protein BAE_06885 PF00528 Binding-protein-dependent transport system inner membrane component BAE_06890 PF00528 Binding-protein-dependent transport system inner membrane component BAE_06895 PF07745 Glycosyl hydrolase family 53 BAE_06900 PF08532 Beta-galactosidase trimerisation domain BAE_06900 PF08533 Beta-galactosidase C-terminal domain BAE_06900 PF02449 Beta-galactosidase BAE_06905 PF03600 Citrate transporter BAE_06915 PF12679 ABC-2 family transporter protein BAE_06920 PF00005 ABC transporter BAE_06925 PF08274 PhnA Zinc-Ribbon BAE_06925 PF03831 PhnA domain BAE_06930 PF02595 Glycerate kinase family BAE_06935 PF02447 GntP family permease BAE_06940 PF05651 Putative sugar diacid recognition BAE_06940 PF13556 PucR C-terminal helix-turn-helix domain BAE_06940 PF17853 GGDEF-like domain BAE_06945 PF17922 Tetracyclin repressor-like, C-terminal domain BAE_06945 PF00440 Bacterial regulatory proteins, tetR family BAE_06950 PF07690 Major Facilitator Superfamily BAE_06960 PF00005 ABC transporter BAE_06970 PF18801 response regulator aspartate phosphatase H, N terminal BAE_06975 PF00874 PRD domain BAE_06975 PF03123 CAT RNA binding domain BAE_06980 PF00232 Glycosyl hydrolase family 1 BAE_06985 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 BAE_06985 PF00367 phosphotransferase system, EIIB BAE_06985 PF02378 Phosphotransferase system, EIIC BAE_07010 PF00293 NUDIX domain BAE_07025 PF00324 Amino acid permease BAE_07035 PF07690 Major Facilitator Superfamily BAE_07040 PF18317 Shikimate 5'-dehydrogenase C-terminal domain BAE_07040 PF08501 Shikimate dehydrogenase substrate binding domain BAE_07045 PF07690 Major Facilitator Superfamily BAE_07050 PF00232 Glycosyl hydrolase family 1 BAE_07055 PF03123 CAT RNA binding domain BAE_07055 PF00874 PRD domain BAE_07060 PF00367 phosphotransferase system, EIIB BAE_07060 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 BAE_07060 PF02378 Phosphotransferase system, EIIC BAE_07080 PF14449 Pre-toxin TG BAE_07080 PF04740 LXG domain of WXG superfamily BAE_07080 PF14410 HNH/ENDO VII superfamily nuclease with conserved GHE residues BAE_07095 PF00232 Glycosyl hydrolase family 1 BAE_07100 PF02378 Phosphotransferase system, EIIC BAE_07100 PF00367 phosphotransferase system, EIIB BAE_07100 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 BAE_07105 PF00392 Bacterial regulatory proteins, gntR family BAE_07105 PF07702 UTRA domain BAE_07120 PF02567 Phenazine biosynthesis-like protein BAE_07125 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family BAE_07125 PF03466 LysR substrate binding domain BAE_07145 PF00027 Cyclic nucleotide-binding domain BAE_07145 PF13545 Crp-like helix-turn-helix domain BAE_07190 PF02590 Predicted SPOUT methyltransferase BAE_07195 PF14116 YyzF-like protein BAE_07200 PF02361 Cobalt transport protein BAE_07205 PF00005 ABC transporter BAE_07205 PF12558 ATP-binding cassette cobalt transporter BAE_07210 PF07155 ECF-type riboflavin transporter, S component BAE_07225 PF00005 ABC transporter BAE_07230 PF00583 Acetyltransferase (GNAT) family BAE_07235 PF13180 PDZ domain BAE_07240 PF00753 Metallo-beta-lactamase superfamily BAE_07245 PF09648 YycH protein BAE_07250 PF07435 YycH protein BAE_07255 PF13426 PAS domain BAE_07255 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BAE_07255 PF00672 HAMP domain BAE_07255 PF00512 His Kinase A (phospho-acceptor) domain BAE_07260 PF00072 Response regulator receiver domain BAE_07260 PF00486 Transcriptional regulatory protein, C terminal BAE_07285 PF00578 AhpC/TSA family BAE_07300 PF04235 Protein of unknown function (DUF418) BAE_07305 PF00709 Adenylosuccinate synthetase BAE_07310 PF00440 Bacterial regulatory proteins, tetR family BAE_07315 PF00067 Cytochrome P450 BAE_07320 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily BAE_07325 PF00772 DnaB-like helicase N terminal domain BAE_07325 PF03796 DnaB-like helicase C terminal domain BAE_07330 PF16226 Domain of unknown function (DUF4885) BAE_07340 PF00756 Putative esterase BAE_07345 PF12833 Helix-turn-helix domain BAE_07345 PF01497 Periplasmic binding protein BAE_07350 PF01497 Periplasmic binding protein BAE_07355 PF00756 Putative esterase BAE_07360 PF14174 YycC-like protein BAE_07365 PF07690 Major Facilitator Superfamily BAE_07370 PF01281 Ribosomal protein L9, N-terminal domain BAE_07370 PF03948 Ribosomal protein L9, C-terminal domain BAE_07375 PF02272 DHHA1 domain BAE_07375 PF01368 DHH family BAE_07380 PF09991 Predicted membrane protein (DUF2232) BAE_07385 PF02833 DHHA2 domain BAE_07385 PF01368 DHH family BAE_07390 PF13739 Deacetylase PdaC BAE_07390 PF11738 Protein of unknown function (DUF3298) BAE_07395 PF04542 Sigma-70 region 2 BAE_07395 PF08281 Sigma-70, region 4 BAE_07405 PF06628 Catalase-related immune-responsive BAE_07405 PF00199 Catalase BAE_07410 PF03358 NADPH-dependent FMN reductase BAE_07415 PF01738 Dienelactone hydrolase family BAE_07420 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily BAE_07425 PF00528 Binding-protein-dependent transport system inner membrane component BAE_07430 PF00005 ABC transporter BAE_07430 PF00571 CBS domain BAE_07435 PF01084 Ribosomal protein S18 BAE_07440 PF00436 Single-strand binding protein family BAE_07445 PF01250 Ribosomal protein S6 BAE_07450 PF06071 Protein of unknown function (DUF933) BAE_07450 PF01926 50S ribosome-binding GTPase BAE_07455 PF06107 Bacterial protein of unknown function (DUF951) BAE_07475 PF06866 Protein of unknown function (DUF1256) BAE_07480 PF02195 ParB-like nuclease domain BAE_07480 PF17762 HTH domain found in ParB protein BAE_07485 PF13614 AAA domain BAE_07495 PF02195 ParB-like nuclease domain BAE_07495 PF17762 HTH domain found in ParB protein BAE_07500 PF02527 rRNA small subunit methyltransferase G BAE_07505 PF13932 GidA associated domain BAE_07505 PF01134 Glucose inhibited division protein A BAE_07510 PF12631 MnmE helical domain BAE_07510 PF01926 50S ribosome-binding GTPase BAE_07510 PF10396 GTP-binding protein TrmE N-terminus BAE_07515 PF01424 R3H domain BAE_07515 PF14804 Jag N-terminus BAE_07520 PF02096 60Kd inner membrane protein BAE_07525 PF00825 Ribonuclease P BAE_07530 PF00468 Ribosomal protein L34 BAE_07535 PF11638 DnaA N-terminal domain BAE_07535 PF08299 Bacterial dnaA protein helix-turn-helix BAE_07535 PF00308 Bacterial dnaA protein BAE_07540 PF02767 DNA polymerase III beta subunit, central domain BAE_07540 PF02768 DNA polymerase III beta subunit, C-terminal domain BAE_07540 PF00712 DNA polymerase III beta subunit, N-terminal domain BAE_07550 PF02463 RecF/RecN/SMC N terminal domain BAE_07555 PF04025 Domain of unknown function (DUF370) BAE_07560 PF00986 DNA gyrase B subunit, carboxyl terminus BAE_07560 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BAE_07560 PF00204 DNA gyrase B BAE_07560 PF01751 Toprim domain BAE_07565 PF03989 DNA gyrase C-terminal domain, beta-propeller BAE_07565 PF00521 DNA gyrase/topoisomerase IV, subunit A BAE_07595 PF14175 YaaC-like Protein BAE_07600 PF00478 IMP dehydrogenase / GMP reductase domain BAE_07600 PF00571 CBS domain BAE_07605 PF07943 Penicillin-binding protein 5, C-terminal domain BAE_07605 PF00768 D-alanyl-D-alanine carboxypeptidase BAE_07610 PF00392 Bacterial regulatory proteins, gntR family BAE_07610 PF00155 Aminotransferase class I and II BAE_07615 PF01680 SOR/SNZ family BAE_07620 PF01174 SNO glutamine amidotransferase family BAE_07625 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) BAE_07625 PF02403 Seryl-tRNA synthetase N-terminal domain BAE_07630 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain BAE_07640 PF01712 Deoxynucleoside kinase BAE_07645 PF01712 Deoxynucleoside kinase BAE_07650 PF01476 LysM domain BAE_07650 PF00704 Glycosyl hydrolases family 18 BAE_07655 PF00857 Isochorismatase family BAE_07660 PF14437 MafB19-like deaminase BAE_07670 PF12169 DNA polymerase III subunits gamma and tau domain III BAE_07675 PF02575 YbaB/EbfC DNA-binding family BAE_07680 PF02132 RecR protein BAE_07680 PF13662 Toprim domain BAE_07685 PF10704 Protein of unknown function (DUF2508) BAE_07690 PF07441 SigmaK-factor processing regulatory protein BofA BAE_07720 PF10764 Inhibitor of sigma-G Gin BAE_07725 PF10112 5-bromo-4-chloroindolyl phosphate hydrolysis protein BAE_07730 PF05816 Toxic anion resistance protein (TelA) BAE_07735 PF03711 Orn/Lys/Arg decarboxylase, C-terminal domain BAE_07735 PF01276 Orn/Lys/Arg decarboxylase, major domain BAE_07740 PF02223 Thymidylate kinase BAE_07745 PF06153 Cyclic-di-AMP receptor BAE_07750 PF03885 Protein of unknown function (DUF327) BAE_07755 PF09115 DNA polymerase III, delta subunit, C terminal BAE_07760 PF04468 PSP1 C-terminal conserved region BAE_07765 PF06156 Initiation control protein YabA BAE_07770 PF05175 Methyltransferase small domain BAE_07775 PF01541 GIY-YIG catalytic domain BAE_07780 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases BAE_07785 PF04014 Antidote-toxin recognition MazE, bacterial antitoxin BAE_07785 PF18277 AbrB C-terminal domain BAE_07795 PF01588 Putative tRNA binding domain BAE_07795 PF09334 tRNA synthetases class I (M) BAE_07795 PF08264 Anticodon-binding domain of tRNA BAE_07800 PF01026 TatD related DNase BAE_07805 PF06725 3D domain BAE_07805 PF07501 G5 domain BAE_07805 PF03990 G5-linked-Ubiquitin-like domain BAE_07810 PF13662 Toprim domain BAE_07810 PF13331 Domain of unknown function (DUF4093) BAE_07815 PF00398 Ribosomal RNA adenine dimethylase BAE_07820 PF05582 YabG peptidase U57 BAE_07825 PF06257 Biofilm formation stimulator VEG BAE_07830 PF00269 Small, acid-soluble spore proteins, alpha/beta type BAE_07835 PF08544 GHMP kinases C terminal BAE_07835 PF00288 GHMP kinases N terminal domain BAE_07840 PF00156 Phosphoribosyl transferase domain BAE_07840 PF09182 Bacterial purine repressor, N-terminal BAE_07845 PF01042 Endoribonuclease L-PSP BAE_07850 PF04026 SpoVG BAE_07855 PF00132 Bacterial transferase hexapeptide (six repeats) BAE_07855 PF00483 Nucleotidyl transferase BAE_07860 PF13793 N-terminal domain of ribose phosphate pyrophosphokinase BAE_07860 PF14572 Phosphoribosyl synthetase-associated domain BAE_07865 PF14693 Ribosomal protein TL5, C-terminal domain BAE_07865 PF01386 Ribosomal L25p family BAE_07870 PF01195 Peptidyl-tRNA hydrolase BAE_07875 PF10955 Protein of unknown function (DUF2757) BAE_07880 PF03461 TRCF domain BAE_07880 PF02559 CarD-like/TRCF domain BAE_07880 PF00270 DEAD/DEAH box helicase BAE_07880 PF17757 UvrB interaction domain BAE_07880 PF00271 Helicase conserved C-terminal domain BAE_07885 PF15714 Stage V sporulation protein T C-terminal, transcription factor BAE_07885 PF04014 Antidote-toxin recognition MazE, bacterial antitoxin BAE_07890 PF01943 Polysaccharide biosynthesis protein BAE_07890 PF14667 Polysaccharide biosynthesis C-terminal domain BAE_07895 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases BAE_07895 PF03819 MazG nucleotide pyrophosphohydrolase domain BAE_07900 PF01479 S4 domain BAE_07905 PF07873 YabP family BAE_07910 PF09578 Spore cortex protein YabQ (Spore_YabQ) BAE_07915 PF04977 Septum formation initiator BAE_07920 PF00575 S1 RNA binding domain BAE_07935 PF07228 Stage II sporulation protein E (SpoIIE) BAE_07940 PF00092 von Willebrand factor type A domain BAE_07945 PF00069 Protein kinase domain BAE_07950 PF01171 PP-loop family BAE_07950 PF09179 TilS substrate binding domain BAE_07950 PF11734 TilS substrate C-terminal domain BAE_07960 PF00004 ATPase family associated with various cellular activities (AAA) BAE_07960 PF17862 AAA+ lid domain BAE_07960 PF01434 Peptidase family M41 BAE_07960 PF06480 FtsH Extracellular BAE_07965 PF03309 Type III pantothenate kinase BAE_07970 PF01430 Hsp33 protein BAE_07975 PF13145 PPIC-type PPIASE domain BAE_07980 PF00291 Pyridoxal-phosphate dependent enzyme BAE_07985 PF04715 Anthranilate synthase component I, N terminal region BAE_07985 PF00425 chorismate binding enzyme BAE_07990 PF00117 Glutamine amidotransferase class-I BAE_07995 PF01063 Amino-transferase class IV BAE_08000 PF00809 Pterin binding enzyme BAE_08005 PF02152 Dihydroneopterin aldolase BAE_08010 PF01288 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK) BAE_08015 PF01381 Helix-turn-helix BAE_08020 PF01207 Dihydrouridine synthase (Dus) BAE_08025 PF00152 tRNA synthetases class II (D, K and N) BAE_08025 PF01336 OB-fold nucleic acid binding domain BAE_08105 PF05848 CtsR N-terminal HTH domain BAE_08105 PF17727 CtsR C-terminal dimerization domain BAE_08110 PF02151 UvrB/uvrC motif BAE_08115 PF00217 ATP:guanido phosphotransferase, C-terminal catalytic domain BAE_08120 PF07724 AAA domain (Cdc48 subfamily) BAE_08120 PF17871 AAA lid domain BAE_08120 PF10431 C-terminal, D2-small domain, of ClpB protein BAE_08120 PF00004 ATPase family associated with various cellular activities (AAA) BAE_08120 PF02861 Clp amino terminal domain, pathogenicity island component BAE_08125 PF18073 Rubredoxin metal binding domain BAE_08130 PF10635 DisA bacterial checkpoint controller linker region BAE_08130 PF02457 DisA bacterial checkpoint controller nucleotide-binding BAE_08140 PF01128 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase BAE_08145 PF02542 YgbB family BAE_08150 PF00749 tRNA synthetases class I (E and Q), catalytic domain BAE_08155 PF06426 Serine acetyltransferase, N-terminal BAE_08155 PF00132 Bacterial transferase hexapeptide (six repeats) BAE_08160 PF09190 DALR domain BAE_08160 PF01406 tRNA synthetases class I (C) catalytic domain BAE_08165 PF00636 Ribonuclease III domain BAE_08170 PF00588 SpoU rRNA Methylase family BAE_08170 PF08032 RNA 2'-O ribose methyltransferase substrate binding BAE_08175 PF05991 YacP-like NYN domain BAE_08180 PF08281 Sigma-70, region 4 BAE_08180 PF04542 Sigma-70 region 2 BAE_08185 PF00471 Ribosomal protein L33 BAE_08190 PF00584 SecE/Sec61-gamma subunits of protein translocation complex BAE_08195 PF00467 KOW motif BAE_08195 PF02357 Transcription termination factor nusG BAE_08200 PF00298 Ribosomal protein L11, RNA binding domain BAE_08200 PF03946 Ribosomal protein L11, N-terminal domain BAE_08205 PF00687 Ribosomal protein L1p/L10e family BAE_08210 PF00466 Ribosomal protein L10 BAE_08215 PF00542 Ribosomal protein L7/L12 C-terminal domain BAE_08215 PF16320 Ribosomal protein L7/L12 dimerisation domain BAE_08220 PF05175 Methyltransferase small domain BAE_08225 PF04565 RNA polymerase Rpb2, domain 3 BAE_08225 PF04563 RNA polymerase beta subunit BAE_08225 PF04561 RNA polymerase Rpb2, domain 2 BAE_08225 PF10385 RNA polymerase beta subunit external 1 domain BAE_08225 PF00562 RNA polymerase Rpb2, domain 6 BAE_08225 PF04560 RNA polymerase Rpb2, domain 7 BAE_08230 PF04983 RNA polymerase Rpb1, domain 3 BAE_08230 PF04998 RNA polymerase Rpb1, domain 5 BAE_08230 PF00623 RNA polymerase Rpb1, domain 2 BAE_08230 PF04997 RNA polymerase Rpb1, domain 1 BAE_08230 PF05000 RNA polymerase Rpb1, domain 4 BAE_08235 PF01248 Ribosomal protein L7Ae/L30e/S12e/Gadd45 family BAE_08240 PF00164 Ribosomal protein S12/S23 BAE_08245 PF00177 Ribosomal protein S7p/S5e BAE_08250 PF00679 Elongation factor G C-terminus BAE_08250 PF03144 Elongation factor Tu domain 2 BAE_08250 PF14492 Elongation Factor G, domain II BAE_08250 PF00009 Elongation factor Tu GTP binding domain BAE_08250 PF03764 Elongation factor G, domain IV BAE_08255 PF03144 Elongation factor Tu domain 2 BAE_08255 PF03143 Elongation factor Tu C-terminal domain BAE_08255 PF00009 Elongation factor Tu GTP binding domain BAE_08260 PF12146 Serine aminopeptidase, S33 BAE_08265 PF00338 Ribosomal protein S10p/S20e BAE_08270 PF00297 Ribosomal protein L3 BAE_08275 PF00573 Ribosomal protein L4/L1 family BAE_08280 PF00276 Ribosomal protein L23 BAE_08285 PF00181 Ribosomal Proteins L2, RNA binding domain BAE_08285 PF03947 Ribosomal Proteins L2, C-terminal domain BAE_08290 PF00203 Ribosomal protein S19 BAE_08295 PF00237 Ribosomal protein L22p/L17e BAE_08300 PF07650 KH domain BAE_08300 PF00189 Ribosomal protein S3, C-terminal domain BAE_08305 PF00252 Ribosomal protein L16p/L10e BAE_08310 PF00831 Ribosomal L29 protein BAE_08315 PF00366 Ribosomal protein S17 BAE_08320 PF00238 Ribosomal protein L14p/L23e BAE_08325 PF00467 KOW motif BAE_08325 PF17136 Ribosomal proteins 50S L24/mitochondrial 39S L24 BAE_08330 PF00673 ribosomal L5P family C-terminus BAE_08330 PF00281 Ribosomal protein L5 BAE_08335 PF00253 Ribosomal protein S14p/S29e BAE_08340 PF00410 Ribosomal protein S8 BAE_08345 PF00347 Ribosomal protein L6 BAE_08350 PF00861 Ribosomal L18 of archaea, bacteria, mitoch. and chloroplast BAE_08355 PF00333 Ribosomal protein S5, N-terminal domain BAE_08355 PF03719 Ribosomal protein S5, C-terminal domain BAE_08360 PF00327 Ribosomal protein L30p/L7e BAE_08365 PF00828 Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27A BAE_08370 PF00344 SecY translocase BAE_08375 PF05191 Adenylate kinase, active site lid BAE_08380 PF00557 Metallopeptidase family M24 BAE_08390 PF01176 Translation initiation factor 1A / IF-1 BAE_08395 PF00444 Ribosomal protein L36 BAE_08400 PF00416 Ribosomal protein S13/S18 BAE_08405 PF00411 Ribosomal protein S11 BAE_08410 PF01193 RNA polymerase Rpb3/Rpb11 dimerisation domain BAE_08410 PF03118 Bacterial RNA polymerase, alpha chain C terminal domain BAE_08410 PF01000 RNA polymerase Rpb3/RpoA insert domain BAE_08415 PF01196 Ribosomal protein L17 BAE_08420 PF00005 ABC transporter BAE_08425 PF00005 ABC transporter BAE_08430 PF02361 Cobalt transport protein BAE_08435 PF01416 tRNA pseudouridine synthase BAE_08440 PF00572 Ribosomal protein L13 BAE_08445 PF00380 Ribosomal protein S9/S16 BAE_08450 PF13302 Acetyltransferase (GNAT) domain BAE_08475 PF10730 Protein of unknown function (DUF2521) BAE_08480 PF01520 N-acetylmuramoyl-L-alanine amidase BAE_08485 PF10609 NUBPL iron-transfer P-loop NTPase BAE_08490 PF17898 Spore germination GerD central core domain BAE_08495 PF14089 KinB-signalling pathway activation in sporulation BAE_08500 PF01522 Polysaccharide deacetylase BAE_08535 PF00700 Bacterial flagellin C-terminal helical region BAE_08535 PF00669 Bacterial flagellin N-terminal helical region BAE_08540 PF01740 STAS domain BAE_08540 PF00916 Sulfate permease family BAE_08545 PF01758 Sodium Bile acid symporter family BAE_08550 PF07075 Protein of unknown function (DUF1343) BAE_08555 PF00933 Glycosyl hydrolase family 3 N terminal domain BAE_08555 PF01915 Glycosyl hydrolase family 3 C-terminal domain BAE_08560 PF00144 Beta-lactamase BAE_08565 PF00367 phosphotransferase system, EIIB BAE_08565 PF02378 Phosphotransferase system, EIIC BAE_08570 PF01380 SIS domain BAE_08570 PF01418 Helix-turn-helix domain, rpiR family BAE_08575 PF13580 SIS domain BAE_08605 PF00491 Arginase family BAE_08610 PF08281 Sigma-70, region 4 BAE_08610 PF04542 Sigma-70 region 2 BAE_08615 PF13490 Putative zinc-finger BAE_08620 PF02457 DisA bacterial checkpoint controller nucleotide-binding BAE_08625 PF07949 YbbR-like protein BAE_08630 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III BAE_08630 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II BAE_08630 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I BAE_08630 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain BAE_08635 PF01380 SIS domain BAE_08655 PF13732 Domain of unknown function (DUF4162) BAE_08655 PF00005 ABC transporter BAE_08665 PF00005 ABC transporter BAE_08665 PF12704 MacB-like periplasmic core domain BAE_08665 PF02687 FtsX-like permease family BAE_08670 PF00005 ABC transporter BAE_08670 PF12704 MacB-like periplasmic core domain BAE_08670 PF02687 FtsX-like permease family BAE_08675 PF10400 Virulence activator alpha C-term BAE_08675 PF03551 Transcriptional regulator PadR-like family BAE_08685 PF00005 ABC transporter BAE_08700 PF13905 Thioredoxin-like BAE_08710 PF04235 Protein of unknown function (DUF418) BAE_08720 PF00005 ABC transporter BAE_08730 PF01381 Helix-turn-helix BAE_08740 PF00561 alpha/beta hydrolase fold BAE_08745 PF12833 Helix-turn-helix domain BAE_08750 PF00440 Bacterial regulatory proteins, tetR family BAE_08750 PF17922 Tetracyclin repressor-like, C-terminal domain BAE_08765 PF00324 Amino acid permease BAE_08770 PF03009 Glycerophosphoryl diester phosphodiesterase family BAE_08775 PF07690 Major Facilitator Superfamily BAE_08790 PF03190 Protein of unknown function, DUF255 BAE_08800 PF00109 Beta-ketoacyl synthase, N-terminal domain BAE_08800 PF02801 Beta-ketoacyl synthase, C-terminal domain BAE_08815 PF00005 ABC transporter BAE_08845 PF02583 Metal-sensitive transcriptional repressor BAE_08850 PF13686 DsrE/DsrF/DrsH-like family BAE_08860 PF00581 Rhodanese-like domain BAE_08860 PF01206 Sulfurtransferase TusA BAE_08865 PF00753 Metallo-beta-lactamase superfamily BAE_08865 PF00581 Rhodanese-like domain BAE_08870 PF01206 Sulfurtransferase TusA BAE_08875 PF01925 Sulfite exporter TauE/SafE BAE_08880 PF03129 Anticodon binding domain BAE_08880 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) BAE_08880 PF09180 Prolyl-tRNA synthetase, C-terminal BAE_08885 PF07690 Major Facilitator Superfamily BAE_08900 PF01047 MarR family BAE_08910 PF04463 Protein of unknown function (DUF523) BAE_08915 PF00248 Aldo/keto reductase family BAE_08920 PF00465 Iron-containing alcohol dehydrogenase BAE_08930 PF13520 Amino acid permease BAE_08940 PF03123 CAT RNA binding domain BAE_08940 PF00874 PRD domain BAE_08945 PF02378 Phosphotransferase system, EIIC BAE_08945 PF00367 phosphotransferase system, EIIB BAE_08945 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 BAE_08950 PF00232 Glycosyl hydrolase family 1 BAE_08965 PF08279 HTH domain BAE_08965 PF05043 Mga helix-turn-helix domain BAE_08965 PF00874 PRD domain BAE_08965 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 BAE_08970 PF00480 ROK family BAE_08975 PF09261 Alpha mannosidase middle domain BAE_08975 PF07748 Glycosyl hydrolases family 38 C-terminal domain BAE_08975 PF01074 Glycosyl hydrolases family 38 N-terminal domain BAE_08985 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit BAE_08995 PF00082 Subtilase family BAE_08995 PF17936 Bacterial Ig domain BAE_09010 PF00324 Amino acid permease BAE_09015 PF02574 Homocysteine S-methyltransferase BAE_09020 PF02588 Uncharacterised 5xTM membrane BCR, YitT family COG1284 BAE_09020 PF10035 Uncharacterized protein conserved in bacteria (DUF2179) BAE_09035 PF07690 Major Facilitator Superfamily BAE_09055 PF00082 Subtilase family BAE_09060 PF01425 Amidase BAE_09065 PF00440 Bacterial regulatory proteins, tetR family BAE_09070 PF07883 Cupin domain BAE_09075 PF00107 Zinc-binding dehydrogenase BAE_09075 PF08240 Alcohol dehydrogenase GroES-like domain BAE_09075 PF13823 Alcohol dehydrogenase GroES-associated BAE_09080 PF01047 MarR family BAE_09085 PF00501 AMP-binding enzyme BAE_09085 PF13193 AMP-binding enzyme C-terminal domain BAE_09090 PF13520 Amino acid permease BAE_09105 PF00561 alpha/beta hydrolase fold BAE_09110 PF01235 Sodium:alanine symporter family BAE_09115 PF04960 Glutaminase BAE_09120 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BAE_09125 PF08664 YcbB domain BAE_09125 PF00072 Response regulator receiver domain BAE_09130 PF05225 helix-turn-helix, Psq domain BAE_09130 PF02810 SEC-C motif BAE_09135 PF11611 Domain of unknown function (DUF4352) BAE_09135 PF17118 Domain of unknown function (DUF5105) BAE_09140 PF00248 Aldo/keto reductase family BAE_09145 PF14501 GHKL domain BAE_09150 PF00072 Response regulator receiver domain BAE_09150 PF04397 LytTr DNA-binding domain BAE_09155 PF00005 ABC transporter BAE_09160 PF12679 ABC-2 family transporter protein BAE_09170 PF17118 Domain of unknown function (DUF5105) BAE_09170 PF11611 Domain of unknown function (DUF4352) BAE_09175 PF07486 Cell Wall Hydrolase BAE_09190 PF00296 Luciferase-like monooxygenase BAE_09195 PF02342 TerD domain BAE_09200 PF02342 TerD domain BAE_09205 PF02342 TerD domain BAE_09210 PF03741 Integral membrane protein TerC family BAE_09235 PF14266 Putative component of 'biosynthetic module' BAE_09240 PF05816 Toxic anion resistance protein (TelA) BAE_09245 PF00005 ABC transporter BAE_09245 PF00571 CBS domain BAE_09250 PF00528 Binding-protein-dependent transport system inner membrane component BAE_09255 PF04069 Substrate binding domain of ABC-type glycine betaine transport system BAE_09270 PF07687 Peptidase dimerisation domain BAE_09270 PF01546 Peptidase family M20/M25/M40 BAE_09275 PF03606 C4-dicarboxylate anaerobic carrier BAE_09280 PF02866 lactate/malate dehydrogenase, alpha/beta C-terminal domain BAE_09280 PF00056 lactate/malate dehydrogenase, NAD binding domain BAE_09285 PF02652 L-lactate permease BAE_09290 PF00356 Bacterial regulatory proteins, lacI family BAE_09295 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family BAE_09300 PF05116 Sucrose-6F-phosphate phosphohydrolase BAE_09305 PF01408 Oxidoreductase family, NAD-binding Rossmann fold BAE_09305 PF02894 Oxidoreductase family, C-terminal alpha/beta domain BAE_09310 PF07690 Major Facilitator Superfamily BAE_09315 PF01810 LysE type translocator BAE_09325 PF10852 Protein of unknown function (DUF2651) BAE_09330 PF08892 YqcI/YcgG family BAE_09335 PF00324 Amino acid permease BAE_09340 PF09347 Domain of unknown function (DUF1989) BAE_09345 PF02540 NAD synthase BAE_09355 PF00171 Aldehyde dehydrogenase family BAE_09360 PF01487 Type I 3-dehydroquinase BAE_09365 PF00205 Thiamine pyrophosphate enzyme, central domain BAE_09365 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain BAE_09365 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain BAE_09375 PF02515 CoA-transferase family III BAE_09380 PF07690 Major Facilitator Superfamily BAE_09390 PF01614 Bacterial transcriptional regulator BAE_09390 PF09339 IclR helix-turn-helix domain BAE_09395 PF01202 Shikimate kinase BAE_09400 PF08241 Methyltransferase domain BAE_09405 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family BAE_09405 PF03466 LysR substrate binding domain BAE_09410 PF00795 Carbon-nitrogen hydrolase BAE_09415 PF05448 Acetyl xylan esterase (AXE1) BAE_09425 PF10127 RNA repair pathway DNA polymerase beta family BAE_09430 PF01619 Proline dehydrogenase BAE_09435 PF00171 Aldehyde dehydrogenase family BAE_09440 PF13556 PucR C-terminal helix-turn-helix domain BAE_09440 PF17853 GGDEF-like domain BAE_09445 PF02040 Arsenical pump membrane protein BAE_09450 PF00528 Binding-protein-dependent transport system inner membrane component BAE_09455 PF00497 Bacterial extracellular solute-binding proteins, family 3 BAE_09460 PF10925 Protein of unknown function (DUF2680) BAE_09465 PF12706 Beta-lactamase superfamily domain BAE_09470 PF01037 Lrp/AsnC ligand binding domain BAE_09475 PF02522 Aminoglycoside 3-N-acetyltransferase BAE_09480 PF11033 Competence protein J (ComJ) BAE_09485 PF17202 Single cache domain 3 BAE_09485 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain BAE_09485 PF00672 HAMP domain BAE_09490 PF14040 Deoxyribonuclease NucA/NucB BAE_09500 PF05378 Hydantoinase/oxoprolinase N-terminal region BAE_09500 PF01968 Hydantoinase/oxoprolinase BAE_09515 PF00005 ABC transporter BAE_09515 PF08402 TOBE domain BAE_09520 PF00528 Binding-protein-dependent transport system inner membrane component BAE_09525 PF00528 Binding-protein-dependent transport system inner membrane component BAE_09530 PF00550 Phosphopantetheine attachment site BAE_09530 PF00668 Condensation domain BAE_09530 PF13193 AMP-binding enzyme C-terminal domain BAE_09530 PF00501 AMP-binding enzyme BAE_09535 PF00668 Condensation domain BAE_09535 PF13193 AMP-binding enzyme C-terminal domain BAE_09535 PF00550 Phosphopantetheine attachment site BAE_09535 PF00501 AMP-binding enzyme BAE_09540 PF00975 Thioesterase domain BAE_09540 PF00550 Phosphopantetheine attachment site BAE_09540 PF00501 AMP-binding enzyme BAE_09540 PF13193 AMP-binding enzyme C-terminal domain BAE_09540 PF00668 Condensation domain BAE_09545 PF00501 AMP-binding enzyme BAE_09545 PF13193 AMP-binding enzyme C-terminal domain BAE_09545 PF00550 Phosphopantetheine attachment site BAE_09545 PF00668 Condensation domain BAE_09550 PF00501 AMP-binding enzyme BAE_09550 PF13193 AMP-binding enzyme C-terminal domain BAE_09550 PF00668 Condensation domain BAE_09550 PF00550 Phosphopantetheine attachment site BAE_09555 PF00975 Thioesterase domain BAE_09560 PF00005 ABC transporter BAE_09570 PF00892 EamA-like transporter family BAE_09575 PF00155 Aminotransferase class I and II BAE_09575 PF00392 Bacterial regulatory proteins, gntR family BAE_09580 PF01648 4'-phosphopantetheinyl transferase superfamily BAE_09585 PF12833 Helix-turn-helix domain BAE_09585 PF06445 GyrI-like small molecule binding domain BAE_09600 PF00005 ABC transporter BAE_09605 PF00528 Binding-protein-dependent transport system inner membrane component BAE_09610 PF00497 Bacterial extracellular solute-binding proteins, family 3 BAE_09615 PF01738 Dienelactone hydrolase family BAE_09620 PF00324 Amino acid permease BAE_09630 PF00005 ABC transporter BAE_09650 PF00854 POT family BAE_09655 PF13229 Right handed beta helix region BAE_09655 PF12708 Pectate lyase superfamily protein BAE_09670 PF00497 Bacterial extracellular solute-binding proteins, family 3 BAE_09675 PF00528 Binding-protein-dependent transport system inner membrane component BAE_09680 PF00005 ABC transporter BAE_09690 PF03972 MmgE/PrpD family BAE_09695 PF00486 Transcriptional regulatory protein, C terminal BAE_09695 PF00072 Response regulator receiver domain BAE_09700 PF00512 His Kinase A (phospho-acceptor) domain BAE_09700 PF00672 HAMP domain BAE_09700 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BAE_09705 PF01740 STAS domain BAE_09705 PF14361 RsbT co-antagonist protein rsbRD N-terminal domain BAE_09710 PF00696 Amino acid kinase family BAE_09710 PF13840 ACT domain BAE_09715 PF07690 Major Facilitator Superfamily BAE_09720 PF00440 Bacterial regulatory proteins, tetR family BAE_09730 PF01022 Bacterial regulatory protein, arsR family BAE_09740 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family BAE_09740 PF03466 LysR substrate binding domain BAE_09745 PF00392 Bacterial regulatory proteins, gntR family BAE_09745 PF00155 Aminotransferase class I and II BAE_09750 PF00202 Aminotransferase class-III BAE_09755 PF13520 Amino acid permease BAE_09760 PF00171 Aldehyde dehydrogenase family BAE_09765 PF02525 Flavodoxin-like fold BAE_09770 PF07987 Domain of unkown function (DUF1775) BAE_09775 PF05425 Copper resistance protein D BAE_09775 PF04234 CopC domain BAE_09775 PF13115 YtkA-like BAE_09780 PF02378 Phosphotransferase system, EIIC BAE_09780 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit BAE_09785 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 BAE_09790 PF01232 Mannitol dehydrogenase Rossmann domain BAE_09790 PF08125 Mannitol dehydrogenase C-terminal domain BAE_09795 PF00672 HAMP domain BAE_09795 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain BAE_09795 PF02743 Cache domain BAE_09830 PF12681 Glyoxalase-like domain BAE_09835 PF05901 Excalibur calcium-binding domain BAE_09845 PF03746 LamB/YcsF family BAE_09850 PF01566 Natural resistance-associated macrophage protein BAE_09855 PF07286 Protein of unknown function (DUF1445) BAE_09860 PF02682 Carboxyltransferase domain, subdomain C and D BAE_09865 PF02626 Carboxyltransferase domain, subdomain A and B BAE_09870 PF01614 Bacterial transcriptional regulator BAE_09870 PF09339 IclR helix-turn-helix domain BAE_09875 PF02525 Flavodoxin-like fold BAE_09880 PF13472 GDSL-like Lipase/Acylhydrolase family BAE_09890 PF08279 HTH domain BAE_09890 PF05043 Mga helix-turn-helix domain BAE_09890 PF00874 PRD domain BAE_09890 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 BAE_09890 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit BAE_09895 PF13649 Methyltransferase domain BAE_09905 PF16242 Pyridoxamine 5'-phosphate oxidase like BAE_09925 PF12823 Domain of unknown function (DUF3817) BAE_09930 PF00392 Bacterial regulatory proteins, gntR family BAE_09930 PF07729 FCD domain BAE_09935 PF02311 AraC-like ligand binding domain BAE_09935 PF12833 Helix-turn-helix domain BAE_09940 PF00892 EamA-like transporter family BAE_09945 PF00180 Isocitrate/isopropylmalate dehydrogenase BAE_09950 PF01751 Toprim domain BAE_09950 PF01131 DNA topoisomerase BAE_09960 PF00990 Diguanylate cyclase, GGDEF domain BAE_09965 PF10096 Uncharacterized protein conserved in bacteria (DUF2334) BAE_09975 PF03170 Bacterial cellulose synthase subunit BAE_09980 PF13520 Amino acid permease BAE_09985 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain BAE_09985 PF00205 Thiamine pyrophosphate enzyme, central domain BAE_09985 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain BAE_09990 PF14410 HNH/ENDO VII superfamily nuclease with conserved GHE residues BAE_09990 PF14449 Pre-toxin TG BAE_09990 PF04740 LXG domain of WXG superfamily BAE_09995 PF18593 CdiI immunity protein BAE_10010 PF14449 Pre-toxin TG BAE_10010 PF14410 HNH/ENDO VII superfamily nuclease with conserved GHE residues BAE_10010 PF04740 LXG domain of WXG superfamily BAE_10030 PF13302 Acetyltransferase (GNAT) domain BAE_10035 PF01566 Natural resistance-associated macrophage protein BAE_10040 PF04226 Transglycosylase associated protein BAE_10045 PF12787 EcsC protein family BAE_10050 PF03480 Bacterial extracellular solute-binding protein, family 7 BAE_10055 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BAE_10055 PF14689 Sensor_kinase_SpoOB-type, alpha-helical domain BAE_10055 PF17203 Single cache domain 3 BAE_10060 PF00072 Response regulator receiver domain BAE_10060 PF08279 HTH domain BAE_10065 PF00375 Sodium:dicarboxylate symporter family BAE_10070 PF01594 AI-2E family transporter BAE_10075 PF00375 Sodium:dicarboxylate symporter family BAE_10080 PF00005 ABC transporter BAE_10095 PF13040 Fur-regulated basic protein B BAE_10100 PF00085 Thioredoxin BAE_10105 PF07478 D-ala D-ala ligase C-terminus BAE_10105 PF01820 D-ala D-ala ligase N-terminus BAE_10110 PF08245 Mur ligase middle domain BAE_10110 PF02875 Mur ligase family, glutamate ligase domain BAE_10110 PF01225 Mur ligase family, catalytic domain BAE_10115 PF12146 Serine aminopeptidase, S33 BAE_10125 PF00271 Helicase conserved C-terminal domain BAE_10125 PF00270 DEAD/DEAH box helicase BAE_10130 PF03703 Bacterial PH domain BAE_10135 PF03703 Bacterial PH domain BAE_10140 PF01694 Rhomboid family BAE_10145 PF01648 4'-phosphopantetheinyl transferase superfamily BAE_10155 PF00842 Alanine racemase, C-terminal domain BAE_10155 PF01168 Alanine racemase, N-terminal domain BAE_10160 PF01402 Ribbon-helix-helix protein, copG family BAE_10165 PF02452 PemK-like, MazF-like toxin of type II toxin-antitoxin system BAE_10170 PF01740 STAS domain BAE_10170 PF08678 Rsbr N terminal BAE_10175 PF01740 STAS domain BAE_10180 PF13581 Histidine kinase-like ATPase domain BAE_10185 PF08673 Phosphoserine phosphatase RsbU, N-terminal domain BAE_10185 PF07228 Stage II sporulation protein E (SpoIIE) BAE_10190 PF01740 STAS domain BAE_10195 PF13581 Histidine kinase-like ATPase domain BAE_10200 PF04542 Sigma-70 region 2 BAE_10200 PF04539 Sigma-70 region 3 BAE_10200 PF04545 Sigma-70, region 4 BAE_10205 PF07228 Stage II sporulation protein E (SpoIIE) BAE_10210 PF17674 HHH domain BAE_10210 PF00575 S1 RNA binding domain BAE_10210 PF09371 Tex-like protein N-terminal domain BAE_10210 PF16921 Tex protein YqgF-like domain BAE_10220 PF10263 SprT-like family BAE_10220 PF17283 SprT-like zinc ribbon domain BAE_10270 PF00082 Subtilase family BAE_10275 PF00313 'Cold-shock' DNA-binding domain BAE_10280 PF02559 CarD-like/TRCF domain BAE_10285 PF08240 Alcohol dehydrogenase GroES-like domain BAE_10285 PF00107 Zinc-binding dehydrogenase BAE_10290 PF13411 MerR HTH family regulatory protein BAE_10295 PF00722 Glycosyl hydrolases family 16 BAE_10305 PF00440 Bacterial regulatory proteins, tetR family BAE_10310 PF07690 Major Facilitator Superfamily BAE_10325 PF00106 short chain dehydrogenase BAE_10335 PF00710 Asparaginase, N-terminal BAE_10335 PF17763 Glutaminase/Asparaginase C-terminal domain BAE_10350 PF00440 Bacterial regulatory proteins, tetR family BAE_10350 PF16925 Tetracyclin repressor-like, C-terminal domain BAE_10355 PF07690 Major Facilitator Superfamily BAE_10380 PF12746 GNAT acetyltransferase BAE_10395 PF00583 Acetyltransferase (GNAT) family BAE_10400 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily BAE_10410 PF00440 Bacterial regulatory proteins, tetR family BAE_10415 PF01872 RibD C-terminal domain BAE_10420 PF01047 MarR family BAE_10425 PF00881 Nitroreductase family BAE_10440 PF01381 Helix-turn-helix BAE_10440 PF07883 Cupin domain BAE_10445 PF01810 LysE type translocator BAE_10450 PF00583 Acetyltransferase (GNAT) family BAE_10460 PF01596 O-methyltransferase BAE_10470 PF03591 AzlC protein BAE_10475 PF00892 EamA-like transporter family BAE_10485 PF00375 Sodium:dicarboxylate symporter family BAE_10525 PF02769 AIR synthase related protein, C-terminal domain BAE_10525 PF00586 AIR synthase related protein, N-terminal domain BAE_10530 PF02367 Threonylcarbamoyl adenosine biosynthesis protein TsaE BAE_10535 PF00814 Glycoprotease family BAE_10540 PF00583 Acetyltransferase (GNAT) family BAE_10545 PF00814 Glycoprotease family BAE_10555 PF00005 ABC transporter BAE_10555 PF16326 ABC transporter C-terminal domain BAE_10555 PF12848 ABC transporter BAE_10560 PF01967 MoaC family BAE_10565 PF02629 CoA binding domain BAE_10565 PF06971 Putative DNA-binding protein N-terminus BAE_10570 PF02416 mttA/Hcf106 family BAE_10575 PF00902 Sec-independent protein translocase protein (TatC) BAE_10585 PF14146 Domain of unknown function (DUF4305) BAE_10590 PF02517 CPBP intramembrane metalloprotease BAE_10595 PF00166 Chaperonin 10 Kd subunit BAE_10600 PF00118 TCP-1/cpn60 chaperonin family BAE_10605 PF01047 MarR family BAE_10610 PF00583 Acetyltransferase (GNAT) family BAE_10615 PF04299 Putative FMN-binding domain BAE_10620 PF02557 D-alanyl-D-alanine carboxypeptidase BAE_10645 PF03330 Lytic transglycolase BAE_10650 PF07676 WD40-like Beta Propeller Repeat BAE_10660 PF07732 Multicopper oxidase BAE_10660 PF07731 Multicopper oxidase BAE_10660 PF00394 Multicopper oxidase BAE_10665 PF00324 Amino acid permease BAE_10670 PF01545 Cation efflux family BAE_10670 PF16916 Dimerisation domain of Zinc Transporter BAE_10675 PF17863 AAA lid domain BAE_10675 PF07726 ATPase family associated with various cellular activities (AAA) BAE_10680 PF01882 Protein of unknown function DUF58 BAE_10685 PF11992 Domain of unknown function (DUF3488) BAE_10685 PF01841 Transglutaminase-like superfamily BAE_10685 PF13559 Domain of unknown function (DUF4129) BAE_10690 PF00117 Glutamine amidotransferase class-I BAE_10690 PF00958 GMP synthase C terminal domain BAE_10690 PF02540 NAD synthase BAE_10725 PF04073 Aminoacyl-tRNA editing domain BAE_10730 PF12833 Helix-turn-helix domain BAE_10735 PF08502 LeuA allosteric (dimerisation) domain BAE_10735 PF00682 HMGL-like BAE_10760 PF13302 Acetyltransferase (GNAT) domain BAE_10770 PF08281 Sigma-70, region 4 BAE_10770 PF04542 Sigma-70 region 2 BAE_10780 PF07690 Major Facilitator Superfamily BAE_10785 PF03466 LysR substrate binding domain BAE_10785 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family BAE_10790 PF00860 Permease family BAE_10795 PF10055 Uncharacterized small protein (DUF2292) BAE_10805 PF10035 Uncharacterized protein conserved in bacteria (DUF2179) BAE_10810 PF14044 NETI protein BAE_10815 PF00731 AIR carboxylase BAE_10820 PF17769 Phosphoribosylaminoimidazole carboxylase C-terminal domain BAE_10820 PF02222 ATP-grasp domain BAE_10825 PF10397 Adenylosuccinate lyase C-terminus BAE_10825 PF00206 Lyase BAE_10830 PF01259 SAICAR synthetase BAE_10835 PF02700 Phosphoribosylformylglycinamidine (FGAM) synthase BAE_10845 PF00586 AIR synthase related protein, N-terminal domain BAE_10845 PF18072 Formylglycinamide ribonucleotide amidotransferase linker domain BAE_10845 PF02769 AIR synthase related protein, C-terminal domain BAE_10850 PF00156 Phosphoribosyl transferase domain BAE_10855 PF02769 AIR synthase related protein, C-terminal domain BAE_10855 PF00586 AIR synthase related protein, N-terminal domain BAE_10860 PF00551 Formyl transferase BAE_10865 PF02142 MGS-like domain BAE_10865 PF01808 AICARFT/IMPCHase bienzyme BAE_10870 PF02843 Phosphoribosylglycinamide synthetase, C domain BAE_10870 PF01071 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain BAE_10870 PF02844 Phosphoribosylglycinamide synthetase, N domain BAE_10890 PF00202 Aminotransferase class-III BAE_10895 PF01144 Coenzyme A transferase BAE_10900 PF01144 Coenzyme A transferase BAE_10905 PF01546 Peptidase family M20/M25/M40 BAE_10905 PF07687 Peptidase dimerisation domain BAE_10910 PF11127 Protein of unknown function (DUF2892) BAE_10915 PF01979 Amidohydrolase family BAE_10915 PF13382 Adenine deaminase C-terminal domain BAE_10920 PF01371 Trp repressor protein BAE_10930 PF01645 Conserved region in glutamate synthase BAE_10945 PF01884 PcrB family BAE_10950 PF00580 UvrD/REP helicase N-terminal domain BAE_10950 PF13361 UvrD-like helicase C-terminal domain BAE_10955 PF00533 BRCA1 C Terminus (BRCT) domain BAE_10955 PF03119 NAD-dependent DNA ligase C4 zinc finger domain BAE_10955 PF12826 Helix-hairpin-helix motif BAE_10955 PF03120 NAD-dependent DNA ligase OB-fold domain BAE_10955 PF01653 NAD-dependent DNA ligase adenylation domain BAE_10960 PF07537 CamS sex pheromone cAM373 precursor BAE_10965 PF01636 Phosphotransferase enzyme family BAE_10970 PF02308 MgtC family BAE_10975 PF00474 Sodium:solute symporter family BAE_10980 PF02686 Glu-tRNAGln amidotransferase C subunit BAE_10985 PF01425 Amidase BAE_10990 PF02934 GatB/GatE catalytic domain BAE_10990 PF02637 GatB domain BAE_10995 PF00440 Bacterial regulatory proteins, tetR family BAE_11000 PF00873 AcrB/AcrD/AcrF family BAE_11005 PF01156 Inosine-uridine preferring nucleoside hydrolase BAE_11010 PF00781 Diacylglycerol kinase catalytic domain BAE_11015 PF05958 tRNA (Uracil-5-)-methyltransferase BAE_11015 PF01938 TRAM domain BAE_11035 PF13176 Tetratricopeptide repeat BAE_11035 PF18801 response regulator aspartate phosphatase H, N terminal BAE_11040 PF01207 Dihydrouridine synthase (Dus) BAE_11055 PF02082 Transcriptional regulator BAE_11060 PF07992 Pyridine nucleotide-disulphide oxidoreductase BAE_11070 PF13021 Domain of unknown function (DUF3885) BAE_11075 PF02056 Family 4 glycosyl hydrolase BAE_11075 PF11975 Family 4 glycosyl hydrolase C-terminal domain BAE_11080 PF01418 Helix-turn-helix domain, rpiR family BAE_11080 PF01380 SIS domain BAE_11085 PF07690 Major Facilitator Superfamily BAE_11095 PF03466 LysR substrate binding domain BAE_11095 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family BAE_11105 PF13037 Domain of unknown function (DUF3898) BAE_11105 PF13039 Protein of unknown function (DUF3900) BAE_11115 PF00483 Nucleotidyl transferase BAE_11120 PF16363 GDP-mannose 4,6 dehydratase BAE_11125 PF03407 Nucleotide-diphospho-sugar transferase BAE_11130 PF00535 Glycosyl transferase family 2 BAE_11135 PF03407 Nucleotide-diphospho-sugar transferase BAE_11140 PF07690 Major Facilitator Superfamily BAE_11145 PF00905 Penicillin binding protein transpeptidase domain BAE_11145 PF03717 Penicillin-binding Protein dimerisation domain BAE_11145 PF05223 NTF2-like N-terminal transpeptidase domain BAE_11150 PF00939 Sodium:sulfate symporter transmembrane region BAE_11165 PF00011 Hsp20/alpha crystallin family BAE_11180 PF13520 Amino acid permease BAE_11185 PF13181 Tetratricopeptide repeat BAE_11185 PF00535 Glycosyl transferase family 2 BAE_11190 PF00005 ABC transporter BAE_11190 PF16326 ABC transporter C-terminal domain BAE_11190 PF12848 ABC transporter BAE_11195 PF02649 Type I GTP cyclohydrolase folE2 BAE_11200 PF13411 MerR HTH family regulatory protein BAE_11205 PF07690 Major Facilitator Superfamily BAE_11210 PF00005 ABC transporter BAE_11210 PF12848 ABC transporter BAE_11215 PF00270 DEAD/DEAH box helicase BAE_11215 PF00271 Helicase conserved C-terminal domain BAE_11220 PF16884 N-terminal domain of oxidoreductase BAE_11220 PF00107 Zinc-binding dehydrogenase BAE_11225 PF11486 Protein of unknown function (DUF3212) BAE_11230 PF11181 Heat induced stress protein YflT BAE_11240 PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase BAE_11240 PF00925 GTP cyclohydrolase II BAE_11245 PF03781 Sulfatase-modifying factor enzyme 1 BAE_11255 PF01872 RibD C-terminal domain BAE_11255 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region BAE_11265 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BAE_11265 PF14689 Sensor_kinase_SpoOB-type, alpha-helical domain BAE_11270 PF12431 Transcriptional regulator BAE_11270 PF00072 Response regulator receiver domain BAE_11270 PF08279 HTH domain BAE_11275 PF03401 Tripartite tricarboxylate transporter family receptor BAE_11280 PF03600 Citrate transporter BAE_11290 PF05870 Phenolic acid decarboxylase (PAD) BAE_11295 PF03551 Transcriptional regulator PadR-like family BAE_11295 PF10400 Virulence activator alpha C-term BAE_11300 PF02898 Nitric oxide synthase, oxygenase domain BAE_11310 PF00708 Acylphosphatase BAE_11315 PF03473 MOSC domain BAE_11315 PF03475 3-alpha domain BAE_11320 PF11121 Protein of unknown function (DUF2639) BAE_11325 PF00557 Metallopeptidase family M24 BAE_11330 PF02378 Phosphotransferase system, EIIC BAE_11330 PF00367 phosphotransferase system, EIIB BAE_11335 PF05675 Protein of unknown function (DUF817) BAE_11345 PF14172 Domain of unknown function (DUF4309) BAE_11350 PF00884 Sulfatase BAE_11355 PF00282 Pyridoxal-dependent decarboxylase conserved domain BAE_11360 PF00672 HAMP domain BAE_11360 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain BAE_11365 PF09350 Domain of unknown function (DUF1992) BAE_11370 PF02378 Phosphotransferase system, EIIC BAE_11370 PF00367 phosphotransferase system, EIIB BAE_11375 PF00128 Alpha amylase, catalytic domain BAE_11375 PF16657 Maltogenic Amylase, C-terminal domain BAE_11380 PF00392 Bacterial regulatory proteins, gntR family BAE_11380 PF07702 UTRA domain BAE_11390 PF00149 Calcineurin-like phosphoesterase BAE_11390 PF02872 5'-nucleotidase, C-terminal domain BAE_11395 PF01965 DJ-1/PfpI family BAE_11400 PF06569 Protein of unknown function (DUF1128) BAE_11405 PF01235 Sodium:alanine symporter family BAE_11415 PF01451 Low molecular weight phosphotyrosine protein phosphatase BAE_11425 PF03631 Virulence factor BrkB BAE_11430 PF13302 Acetyltransferase (GNAT) domain BAE_11435 PF07690 Major Facilitator Superfamily BAE_11445 PF01699 Sodium/calcium exchanger protein BAE_11450 PF14167 YfkD-like protein BAE_11460 PF01709 Transcriptional regulator BAE_11470 PF00924 Mechanosensitive ion channel BAE_11475 PF08756 YfkB-like domain BAE_11475 PF04055 Radical SAM superfamily BAE_11485 PF01522 Polysaccharide deacetylase BAE_11495 PF10898 Protein of unknown function (DUF2716) BAE_11500 PF01544 CorA-like Mg2+ transporter protein BAE_11510 PF00730 HhH-GPD superfamily base excision DNA repair protein BAE_11515 PF05958 tRNA (Uracil-5-)-methyltransferase BAE_11515 PF01938 TRAM domain BAE_11530 PF13411 MerR HTH family regulatory protein BAE_11530 PF07739 TipAS antibiotic-recognition domain BAE_11535 PF07690 Major Facilitator Superfamily BAE_11550 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain BAE_11550 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) BAE_11550 PF02824 TGS domain BAE_11550 PF03129 Anticodon binding domain BAE_11600 PF00893 Small Multidrug Resistance protein BAE_11605 PF00893 Small Multidrug Resistance protein BAE_11610 PF17934 Tetracyclin repressor-like, C-terminal domain BAE_11610 PF00440 Bacterial regulatory proteins, tetR family BAE_11625 PF00657 GDSL-like Lipase/Acylhydrolase BAE_11630 PF07992 Pyridine nucleotide-disulphide oxidoreductase BAE_11635 PF02805 Metal binding domain of Ada BAE_11635 PF12833 Helix-turn-helix domain BAE_11640 PF01497 Periplasmic binding protein BAE_11645 PF00664 ABC transporter transmembrane region BAE_11645 PF00005 ABC transporter BAE_11650 PF02694 Uncharacterised BCR, YnfA/UPF0060 family BAE_11655 PF04545 Sigma-70, region 4 BAE_11655 PF04542 Sigma-70 region 2 BAE_11670 PF00107 Zinc-binding dehydrogenase BAE_11670 PF08240 Alcohol dehydrogenase GroES-like domain BAE_11675 PF12867 DinB superfamily BAE_11685 PF01047 MarR family BAE_11690 PF03706 Lysylphosphatidylglycerol synthase TM region BAE_11690 PF09924 Uncharacterised conserved protein (DUF2156) BAE_11705 PF18801 response regulator aspartate phosphatase H, N terminal BAE_11710 PF00881 Nitroreductase family BAE_11725 PF01370 NAD dependent epimerase/dehydratase family BAE_11725 PF08338 Domain of unknown function (DUF1731) BAE_11730 PF02631 RecX family BAE_11735 PF08838 Protein of unknown function (DUF1811) BAE_11745 PF08176 Small acid-soluble spore protein K family BAE_11750 PF14043 WVELL protein BAE_11755 PF00535 Glycosyl transferase family 2 BAE_11760 PF09586 Bacterial membrane protein YfhO BAE_11765 PF01494 FAD binding domain BAE_11780 PF00190 Cupin BAE_11785 PF12841 YvrJ protein family BAE_11790 PF04545 Sigma-70, region 4 BAE_11800 PF04307 LexA-binding, inner membrane-associated putative hydrolase BAE_11805 PF14815 NUDIX domain BAE_11805 PF00730 HhH-GPD superfamily base excision DNA repair protein BAE_11820 PF04259 Small, acid-soluble spore protein, gamma-type BAE_11830 PF04167 Protein of unknown function (DUF402) BAE_11835 PF00664 ABC transporter transmembrane region BAE_11835 PF00005 ABC transporter BAE_11840 PF08352 Oligopeptide/dipeptide transporter, C-terminal region BAE_11840 PF00005 ABC transporter BAE_11845 PF00005 ABC transporter BAE_11845 PF08352 Oligopeptide/dipeptide transporter, C-terminal region BAE_11850 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle BAE_11865 PF06081 Aromatic acid exporter family member 1 BAE_11870 PF00202 Aminotransferase class-III BAE_11875 PF00578 AhpC/TSA family BAE_11880 PF01475 Ferric uptake regulator family BAE_11885 PF11023 Zinc-ribbon containing domain BAE_11890 PF14540 Nucleotidyltransferase-like BAE_11890 PF18576 Helix-turn-helix domain BAE_12040 PF00884 Sulfatase BAE_12045 PF10502 Signal peptidase, peptidase S26 BAE_12050 PF01053 Cys/Met metabolism PLP-dependent enzyme BAE_12060 PF00005 ABC transporter BAE_12065 PF09084 NMT1/THI5 like BAE_12070 PF00528 Binding-protein-dependent transport system inner membrane component BAE_12075 PF00296 Luciferase-like monooxygenase BAE_12090 PF00005 ABC transporter BAE_12125 PF08331 Domain of unknown function (DUF1730) BAE_12130 PF12671 Putative amidase domain BAE_12135 PF00588 SpoU rRNA Methylase family BAE_12140 PF06798 PrkA serine protein kinase C-terminal domain BAE_12140 PF08298 PrkA AAA domain BAE_12145 PF04285 Protein of unknown function (DUF444) BAE_12155 PF07690 Major Facilitator Superfamily BAE_12160 PF03358 NADPH-dependent FMN reductase BAE_12170 PF00313 'Cold-shock' DNA-binding domain BAE_12180 PF00990 Diguanylate cyclase, GGDEF domain BAE_12180 PF07694 5TMR of 5TMR-LYT BAE_12195 PF09580 Sporulation lipoprotein YhcN/YlaJ (Spore_YhcN_YlaJ) BAE_12205 PF07875 Coat F domain BAE_12210 PF13188 PAS domain BAE_12210 PF13426 PAS domain BAE_12210 PF00512 His Kinase A (phospho-acceptor) domain BAE_12210 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BAE_12210 PF00989 PAS fold BAE_12215 PF00565 Staphylococcal nuclease homologue BAE_12215 PF00149 Calcineurin-like phosphoesterase BAE_12215 PF00746 LPXTG cell wall anchor motif BAE_12215 PF02872 5'-nucleotidase, C-terminal domain BAE_12220 PF04203 Sortase domain BAE_12225 PF01479 S4 domain BAE_12225 PF00849 RNA pseudouridylate synthase BAE_12235 PF13419 Haloacid dehalogenase-like hydrolase BAE_12240 PF00795 Carbon-nitrogen hydrolase BAE_12240 PF00583 Acetyltransferase (GNAT) family BAE_12260 PF13556 PucR C-terminal helix-turn-helix domain BAE_12260 PF05651 Putative sugar diacid recognition BAE_12260 PF17853 GGDEF-like domain BAE_12265 PF00202 Aminotransferase class-III BAE_12270 PF04309 Glycerol-3-phosphate responsive antiterminator BAE_12275 PF00230 Major intrinsic protein BAE_12280 PF00370 FGGY family of carbohydrate kinases, N-terminal domain BAE_12280 PF02782 FGGY family of carbohydrate kinases, C-terminal domain BAE_12285 PF16901 C-terminal domain of alpha-glycerophosphate oxidase BAE_12285 PF01266 FAD dependent oxidoreductase BAE_12290 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I BAE_12290 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II BAE_12290 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III BAE_12290 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain BAE_12295 PF07730 Histidine kinase BAE_12295 PF13185 GAF domain BAE_12300 PF00196 Bacterial regulatory proteins, luxR family BAE_12300 PF00072 Response regulator receiver domain BAE_12305 PF14148 YhdB-like protein BAE_12310 PF13028 Protein of unknown function (DUF3889) BAE_12315 PF00199 Catalase BAE_12315 PF06628 Catalase-related immune-responsive BAE_12320 PF02082 Transcriptional regulator BAE_12325 PF00970 Oxidoreductase FAD-binding domain BAE_12325 PF00175 Oxidoreductase NAD-binding domain BAE_12325 PF00042 Globin BAE_12330 PF04293 SpoVR like protein BAE_12335 PF00245 Alkaline phosphatase BAE_12340 PF01476 LysM domain BAE_12340 PF00877 NlpC/P60 family BAE_12345 PF13520 Amino acid permease BAE_12350 PF17453 Sigma-M inhibitor BAE_12355 PF13800 Sigma factor regulator N-terminal BAE_12355 PF13791 Sigma factor regulator C-terminal BAE_12360 PF04542 Sigma-70 region 2 BAE_12360 PF08281 Sigma-70, region 4 BAE_12365 PF01553 Acyltransferase BAE_12370 PF00571 CBS domain BAE_12370 PF01595 Cyclin M transmembrane N-terminal domain BAE_12370 PF03471 Transporter associated domain BAE_12375 PF13411 MerR HTH family regulatory protein BAE_12380 PF00571 CBS domain BAE_12380 PF01595 Cyclin M transmembrane N-terminal domain BAE_12380 PF03471 Transporter associated domain BAE_12390 PF02537 CrcB-like protein, Camphor Resistance (CrcB) BAE_12395 PF02537 CrcB-like protein, Camphor Resistance (CrcB) BAE_12400 PF03009 Glycerophosphoryl diester phosphodiesterase family BAE_12405 PF17444 Uncharacterized YhdX-like BAE_12410 PF00924 Mechanosensitive ion channel BAE_12415 PF02146 Sir2 family BAE_12420 PF01522 Polysaccharide deacetylase BAE_12425 PF01063 Amino-transferase class IV BAE_12430 PF00582 Universal stress protein family BAE_12435 PF00005 ABC transporter BAE_12435 PF00664 ABC transporter transmembrane region BAE_12440 PF00005 ABC transporter BAE_12440 PF00664 ABC transporter transmembrane region BAE_12455 PF13460 NAD(P)H-binding BAE_12460 PF00269 Small, acid-soluble spore proteins, alpha/beta type BAE_12465 PF03459 TOBE domain BAE_12465 PF17912 MalK OB fold domain BAE_12465 PF00005 ABC transporter BAE_12470 PF13556 PucR C-terminal helix-turn-helix domain BAE_12475 PF17277 Family of unknown function (DUF5342) BAE_12480 PF14398 YheC/D like ATP-grasp BAE_12485 PF14398 YheC/D like ATP-grasp BAE_12490 PF04286 Protein of unknown function (DUF445) BAE_12495 PF06133 Control of competence regulator ComK, YlbF/YmcA BAE_12505 PF04055 Radical SAM superfamily BAE_12510 PF13434 L-lysine 6-monooxygenase (NADPH-requiring) BAE_12515 PF00999 Sodium/hydrogen exchanger family BAE_12520 PF02080 TrkA-C domain BAE_12530 PF00378 Enoyl-CoA hydratase/isomerase BAE_12535 PF14120 YhzD-like protein BAE_12540 PF00149 Calcineurin-like phosphoesterase BAE_12545 PF13514 AAA domain BAE_12550 PF01966 HD domain BAE_12555 PF14147 Sporulation protein YhaL BAE_12565 PF09680 Family of unknown function BAE_12570 PF09680 Family of unknown function BAE_12580 PF11667 Putative zincin peptidase BAE_12585 PF08963 Protein of unknown function (DUF1878) BAE_12590 PF01047 MarR family BAE_12595 PF12732 YtxH-like protein BAE_12610 PF17099 Tryptophan transporter TrpP BAE_12615 PF00266 Aminotransferase class-V BAE_12620 PF01230 HIT domain BAE_12625 PF00005 ABC transporter BAE_12630 PF05975 Bacterial ABC transporter protein EcsB BAE_12635 PF12787 EcsC protein family BAE_12640 PF01546 Peptidase family M20/M25/M40 BAE_12640 PF07687 Peptidase dimerisation domain BAE_12650 PF03992 Antibiotic biosynthesis monooxygenase BAE_12655 PF00912 Transglycosylase BAE_12655 PF00905 Penicillin binding protein transpeptidase domain BAE_12660 PF01208 Uroporphyrinogen decarboxylase (URO-D) BAE_12675 PF00440 Bacterial regulatory proteins, tetR family BAE_12675 PF17932 Tetracyclin repressor-like, C-terminal domain BAE_12685 PF05343 M42 glutamyl aminopeptidase BAE_12690 PF00375 Sodium:dicarboxylate symporter family BAE_12695 PF14149 YhfH-like protein BAE_12700 PF12706 Beta-lactamase superfamily domain BAE_12705 PF10437 Bacterial lipoate protein ligase C-terminus BAE_12705 PF03099 Biotin/lipoate A/B protein ligase family BAE_12710 PF00501 AMP-binding enzyme BAE_12710 PF13193 AMP-binding enzyme C-terminal domain BAE_12725 PF01435 Peptidase family M48 BAE_12725 PF16491 CAAX prenyl protease N-terminal, five membrane helices BAE_12730 PF00082 Subtilase family BAE_12730 PF05922 Peptidase inhibitor I9 BAE_12735 PF00300 Histidine phosphatase superfamily (branch 1) BAE_12740 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain BAE_12745 PF00355 Rieske [2Fe-2S] domain BAE_12745 PF01266 FAD dependent oxidoreductase BAE_12755 PF08858 IDEAL domain BAE_12760 PF06338 ComK protein BAE_12765 PF14031 Putative serine dehydratase domain BAE_12765 PF01168 Alanine racemase, N-terminal domain BAE_12775 PF00392 Bacterial regulatory proteins, gntR family BAE_12775 PF00155 Aminotransferase class I and II BAE_12780 PF07690 Major Facilitator Superfamily BAE_12785 PF01337 Barstar (barnase inhibitor) BAE_12790 PF01032 FecCD transport family BAE_12795 PF01032 FecCD transport family BAE_12800 PF00005 ABC transporter BAE_12805 PF01497 Periplasmic binding protein BAE_12815 PF03816 Cell envelope-related transcriptional attenuator domain BAE_12830 PF09335 SNARE associated Golgi protein BAE_12835 PF10502 Signal peptidase, peptidase S26 BAE_12840 PF05145 Transition state regulatory protein AbrB BAE_12855 PF07681 DoxX BAE_12860 PF02915 Rubrerythrin BAE_12865 PF12705 PD-(D/E)XK nuclease superfamily BAE_12870 PF13361 UvrD-like helicase C-terminal domain BAE_12870 PF00580 UvrD/REP helicase N-terminal domain BAE_12870 PF12705 PD-(D/E)XK nuclease superfamily BAE_12875 PF00149 Calcineurin-like phosphoesterase BAE_12875 PF12320 Type 5 capsule protein repressor C-terminal domain BAE_12880 PF13476 AAA domain BAE_12890 PF10676 Spore germination protein gerPA/gerPF BAE_12895 PF10970 Spore germination protein GerPE BAE_12905 PF10737 Spore germination protein GerPC BAE_12910 PF10803 Spore germination GerPB BAE_12915 PF10676 Spore germination protein gerPA/gerPF BAE_12925 PF08757 CotH kinase protein BAE_12940 PF01557 Fumarylacetoacetate (FAA) hydrolase family BAE_12945 PF07457 Protein of unknown function (DUF1516) BAE_12950 PF10949 Protein of unknown function (DUF2777) BAE_12955 PF13537 Glutamine amidotransferase domain BAE_12955 PF00733 Asparagine synthase BAE_12960 PF01593 Flavin containing amine oxidoreductase BAE_12975 PF01554 MatE BAE_12980 PF12833 Helix-turn-helix domain BAE_12980 PF02311 AraC-like ligand binding domain BAE_13000 PF00202 Aminotransferase class-III BAE_13005 PF00282 Pyridoxal-dependent decarboxylase conserved domain BAE_13010 PF04183 IucA / IucC family BAE_13010 PF06276 Ferric iron reductase FhuF-like transporter BAE_13020 PF13434 L-lysine 6-monooxygenase (NADPH-requiring) BAE_13025 PF06276 Ferric iron reductase FhuF-like transporter BAE_13025 PF04183 IucA / IucC family BAE_13040 PF00809 Pterin binding enzyme BAE_13040 PF02965 Vitamin B12 dependent methionine synthase, activation domain BAE_13040 PF02607 B12 binding domain BAE_13040 PF02310 B12 binding domain BAE_13040 PF02574 Homocysteine S-methyltransferase BAE_13045 PF02219 Methylenetetrahydrofolate reductase BAE_13045 PF02574 Homocysteine S-methyltransferase BAE_13050 PF04461 Protein of unknown function (DUF520) BAE_13055 PF13509 S1 domain BAE_13055 PF17783 CvfB-like winged helix domain BAE_13065 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain BAE_13065 PF00672 HAMP domain BAE_13065 PF02743 Cache domain BAE_13070 PF02645 Uncharacterised protein, DegV family COG1307 BAE_13075 PF10035 Uncharacterized protein conserved in bacteria (DUF2179) BAE_13075 PF02588 Uncharacterised 5xTM membrane BCR, YitT family COG1284 BAE_13080 PF12690 Intracellular proteinase inhibitor BAE_13085 PF12758 Protein of unknown function (DUF3813) BAE_13100 PF00326 Prolyl oligopeptidase family BAE_13105 PF01883 Iron-sulfur cluster assembly protein BAE_13110 PF01565 FAD binding domain BAE_13115 PF07690 Major Facilitator Superfamily BAE_13120 PF02774 Semialdehyde dehydrogenase, dimerisation domain BAE_13120 PF01118 Semialdehyde dehydrogenase, NAD binding domain BAE_13125 PF01960 ArgJ family BAE_13130 PF00696 Amino acid kinase family BAE_13135 PF00202 Aminotransferase class-III BAE_13140 PF00117 Glutamine amidotransferase class-I BAE_13140 PF00988 Carbamoyl-phosphate synthase small chain, CPSase domain BAE_13145 PF02787 Carbamoyl-phosphate synthetase large chain, oligomerisation domain BAE_13145 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain BAE_13150 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain BAE_13150 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain BAE_13155 PF14168 YjzC-like protein BAE_13160 PF07690 Major Facilitator Superfamily BAE_13165 PF11151 Protein of unknown function (DUF2929) BAE_13180 PF02608 ABC transporter substrate-binding protein PnrA-like BAE_13185 PF10815 ComZ BAE_13195 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III BAE_13195 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal BAE_13200 PF00109 Beta-ketoacyl synthase, N-terminal domain BAE_13200 PF02801 Beta-ketoacyl synthase, C-terminal domain BAE_13205 PF10026 Predicted Zn-dependent protease (DUF2268) BAE_13210 PF00005 ABC transporter BAE_13210 PF08352 Oligopeptide/dipeptide transporter, C-terminal region BAE_13215 PF00005 ABC transporter BAE_13215 PF08352 Oligopeptide/dipeptide transporter, C-terminal region BAE_13220 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle BAE_13225 PF00528 Binding-protein-dependent transport system inner membrane component BAE_13230 PF00528 Binding-protein-dependent transport system inner membrane component BAE_13230 PF12911 N-terminal TM domain of oligopeptide transport permease C BAE_13235 PF03781 Sulfatase-modifying factor enzyme 1 BAE_13240 PF00925 GTP cyclohydrolase II BAE_13265 PF12227 Protein of unknown function (DUF3603) BAE_13270 PF00579 tRNA synthetases class I (W and Y) BAE_13280 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle BAE_13285 PF00528 Binding-protein-dependent transport system inner membrane component BAE_13290 PF12911 N-terminal TM domain of oligopeptide transport permease C BAE_13290 PF00528 Binding-protein-dependent transport system inner membrane component BAE_13295 PF00005 ABC transporter BAE_13295 PF08352 Oligopeptide/dipeptide transporter, C-terminal region BAE_13300 PF00005 ABC transporter BAE_13300 PF08352 Oligopeptide/dipeptide transporter, C-terminal region BAE_13310 PF13508 Acetyltransferase (GNAT) domain BAE_13315 PF03960 ArsC family BAE_13320 PF03741 Integral membrane protein TerC family BAE_13325 PF05389 Negative regulator of genetic competence (MecA) BAE_13330 PF13396 Phospholipase_D-nuclease N-terminal BAE_13330 PF13091 PLD-like domain BAE_13340 PF01432 Peptidase family M3 BAE_13340 PF08439 Oligopeptidase F BAE_13355 PF01152 Bacterial-like globin BAE_13360 PF01464 Transglycosylase SLT domain BAE_13365 PF01928 CYTH domain BAE_13375 PF04607 Region found in RelA / SpoT proteins BAE_13380 PF01513 ATP-NAD kinase BAE_13385 PF00849 RNA pseudouridylate synthase BAE_13390 PF00149 Calcineurin-like phosphoesterase BAE_13395 PF02254 TrkA-N domain BAE_13395 PF02080 TrkA-C domain BAE_13395 PF00999 Sodium/hydrogen exchanger family BAE_13400 PF03070 TENA/THI-4/PQQC family BAE_13405 PF02581 Thiamine monophosphate synthase BAE_13410 PF01266 FAD dependent oxidoreductase BAE_13415 PF02597 ThiS family BAE_13420 PF05690 Thiazole biosynthesis protein ThiG BAE_13425 PF00899 ThiF family BAE_13430 PF08543 Phosphomethylpyrimidine kinase BAE_13440 PF14153 Spore coat protein CotO BAE_13445 PF10612 Spore coat protein Z BAE_13450 PF10612 Spore coat protein Z BAE_13455 PF07552 Spore Coat Protein X and V domain BAE_13465 PF07552 Spore Coat Protein X and V domain BAE_13470 PF07098 Protein of unknown function (DUF1360) BAE_13485 PF14069 Stage VI sporulation protein F BAE_13490 PF13361 UvrD-like helicase C-terminal domain BAE_13490 PF00580 UvrD/REP helicase N-terminal domain BAE_13500 PF13673 Acetyltransferase (GNAT) domain BAE_13510 PF00756 Putative esterase BAE_13515 PF01053 Cys/Met metabolism PLP-dependent enzyme BAE_13520 PF01053 Cys/Met metabolism PLP-dependent enzyme BAE_13530 PF03255 Acetyl co-enzyme A carboxylase carboxyltransferase alpha subunit BAE_13545 PF18801 response regulator aspartate phosphatase H, N terminal BAE_13545 PF13176 Tetratricopeptide repeat BAE_13555 PF13673 Acetyltransferase (GNAT) domain BAE_13565 PF00302 Chloramphenicol acetyltransferase BAE_13575 PF00106 short chain dehydrogenase BAE_13585 PF10852 Protein of unknown function (DUF2651) BAE_13590 PF01636 Phosphotransferase enzyme family BAE_13595 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family BAE_13595 PF03466 LysR substrate binding domain BAE_13600 PF01177 Asp/Glu/Hydantoin racemase BAE_13615 PF03466 LysR substrate binding domain BAE_13615 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family BAE_13620 PF07690 Major Facilitator Superfamily BAE_13625 PF07992 Pyridine nucleotide-disulphide oxidoreductase BAE_13625 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain BAE_13635 PF13673 Acetyltransferase (GNAT) domain BAE_13650 PF01168 Alanine racemase, N-terminal domain BAE_13650 PF00842 Alanine racemase, C-terminal domain BAE_13655 PF00107 Zinc-binding dehydrogenase BAE_13655 PF08240 Alcohol dehydrogenase GroES-like domain BAE_13660 PF00440 Bacterial regulatory proteins, tetR family BAE_13670 PF00700 Bacterial flagellin C-terminal helical region BAE_13670 PF00669 Bacterial flagellin N-terminal helical region BAE_13675 PF00669 Bacterial flagellin N-terminal helical region BAE_13675 PF00700 Bacterial flagellin C-terminal helical region BAE_13680 PF01494 FAD binding domain BAE_13695 PF05908 Poly-gamma-glutamate hydrolase BAE_13700 PF06114 IrrE N-terminal-like domain BAE_13705 PF01476 LysM domain BAE_13705 PF01510 N-acetylmuramoyl-L-alanine amidase BAE_13705 PF01471 Putative peptidoglycan binding domain BAE_13710 PF14185 Antitoxin SpoIISB, type II toxin-antitoxin system BAE_13715 PF14171 Toxin SpoIISA, type II toxin-antitoxin system BAE_13720 PF01384 Phosphate transporter family BAE_13725 PF01865 Protein of unknown function DUF47 BAE_13745 PF00528 Binding-protein-dependent transport system inner membrane component BAE_13750 PF00528 Binding-protein-dependent transport system inner membrane component BAE_13755 PF00005 ABC transporter BAE_13755 PF17850 CysA C-terminal regulatory domain BAE_13755 PF12857 TOBE-like domain BAE_13765 PF03611 PTS system sugar-specific permease component BAE_13780 PF08240 Alcohol dehydrogenase GroES-like domain BAE_13780 PF00107 Zinc-binding dehydrogenase BAE_13785 PF00676 Dehydrogenase E1 component BAE_13790 PF00364 Biotin-requiring enzyme BAE_13790 PF02779 Transketolase, pyrimidine binding domain BAE_13790 PF02780 Transketolase, C-terminal domain BAE_13795 PF00364 Biotin-requiring enzyme BAE_13795 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) BAE_13795 PF02817 e3 binding domain BAE_13800 PF07992 Pyridine nucleotide-disulphide oxidoreductase BAE_13800 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain BAE_13815 PF04198 Putative sugar-binding domain BAE_13825 PF13520 Amino acid permease BAE_13830 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily BAE_13835 PF13180 PDZ domain BAE_13840 PF14748 Pyrroline-5-carboxylate reductase dimerisation BAE_13840 PF03807 NADP oxidoreductase coenzyme F420-dependent BAE_13845 PF04951 D-aminopeptidase BAE_13850 PF00528 Binding-protein-dependent transport system inner membrane component BAE_13855 PF12911 N-terminal TM domain of oligopeptide transport permease C BAE_13855 PF00528 Binding-protein-dependent transport system inner membrane component BAE_13860 PF00005 ABC transporter BAE_13860 PF08352 Oligopeptide/dipeptide transporter, C-terminal region BAE_13865 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle BAE_13870 PF02016 LD-carboxypeptidase N-terminal domain BAE_13870 PF17676 LD-carboxypeptidase C-terminal domain BAE_13875 PF13378 Enolase C-terminal domain-like BAE_13875 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain BAE_13880 PF00877 NlpC/P60 family BAE_13885 PF08352 Oligopeptide/dipeptide transporter, C-terminal region BAE_13885 PF00005 ABC transporter BAE_13895 PF03061 Thioesterase superfamily BAE_13900 PF03551 Transcriptional regulator PadR-like family BAE_13915 PF13302 Acetyltransferase (GNAT) domain BAE_13920 PF12833 Helix-turn-helix domain BAE_13920 PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain BAE_13920 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain BAE_13920 PF02805 Metal binding domain of Ada BAE_13925 PF00893 Small Multidrug Resistance protein BAE_13930 PF00893 Small Multidrug Resistance protein BAE_13940 PF01842 ACT domain BAE_13940 PF00551 Formyl transferase BAE_13945 PF00696 Amino acid kinase family BAE_13945 PF01472 PUA domain BAE_13950 PF00171 Aldehyde dehydrogenase family BAE_13955 PF18801 response regulator aspartate phosphatase H, N terminal BAE_13965 PF02566 OsmC-like protein BAE_13970 PF01047 MarR family BAE_13975 PF02566 OsmC-like protein BAE_13980 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region BAE_13985 PF08267 Cobalamin-independent synthase, N-terminal domain BAE_13985 PF01717 Cobalamin-independent synthase, Catalytic domain BAE_13990 PF00082 Subtilase family BAE_14005 PF00072 Response regulator receiver domain BAE_14005 PF00486 Transcriptional regulatory protein, C terminal BAE_14010 PF00512 His Kinase A (phospho-acceptor) domain BAE_14010 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BAE_14010 PF00672 HAMP domain BAE_14015 PF03413 Peptidase propeptide and YPEB domain BAE_14020 PF03413 Peptidase propeptide and YPEB domain BAE_14030 PF00571 CBS domain BAE_14030 PF01769 Divalent cation transporter BAE_14030 PF03448 MgtE intracellular N domain BAE_14040 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family BAE_14040 PF03466 LysR substrate binding domain BAE_14050 PF13411 MerR HTH family regulatory protein BAE_14060 PF01047 MarR family BAE_14065 PF03707 Bacterial signalling protein N terminal repeat BAE_14065 PF00563 EAL domain BAE_14065 PF00990 Diguanylate cyclase, GGDEF domain BAE_14070 PF09335 SNARE associated Golgi protein BAE_14075 PF03741 Integral membrane protein TerC family BAE_14080 PF04542 Sigma-70 region 2 BAE_14085 PF12791 Anti-sigma factor N-terminus BAE_14090 PF00269 Small, acid-soluble spore proteins, alpha/beta type BAE_14095 PF08876 Domain of unknown function (DUF1836) BAE_14100 PF01435 Peptidase family M48 BAE_14105 PF02386 Cation transport protein BAE_14110 PF04239 Protein of unknown function (DUF421) BAE_14120 PF01757 Acyltransferase family BAE_14125 PF13188 PAS domain BAE_14125 PF00512 His Kinase A (phospho-acceptor) domain BAE_14125 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BAE_14125 PF13426 PAS domain BAE_14125 PF00989 PAS fold BAE_14130 PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain BAE_14130 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain BAE_14135 PF01008 Initiation factor 2 subunit family BAE_14140 PF01636 Phosphotransferase enzyme family BAE_14145 PF00155 Aminotransferase class I and II BAE_14150 PF00016 Ribulose bisphosphate carboxylase large chain, catalytic domain BAE_14150 PF02788 Ribulose bisphosphate carboxylase large chain, N-terminal domain BAE_14160 PF00596 Class II Aldolase and Adducin N-terminal domain BAE_14165 PF03079 ARD/ARD' family BAE_14170 PF09388 Spo0E like sporulation regulatory protein BAE_14175 PF00512 His Kinase A (phospho-acceptor) domain BAE_14175 PF02743 Cache domain BAE_14175 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BAE_14180 PF01047 MarR family BAE_14185 PF13677 Membrane MotB of proton-channel complex MotA/MotB BAE_14185 PF00691 OmpA family BAE_14190 PF01618 MotA/TolQ/ExbB proton channel family BAE_14195 PF00004 ATPase family associated with various cellular activities (AAA) BAE_14195 PF07724 AAA domain (Cdc48 subfamily) BAE_14195 PF17871 AAA lid domain BAE_14195 PF10431 C-terminal, D2-small domain, of ClpB protein BAE_14205 PF06508 Queuosine biosynthesis protein QueC BAE_14210 PF01242 6-pyruvoyl tetrahydropterin synthase BAE_14215 PF04055 Radical SAM superfamily BAE_14220 PF14489 QueF-like protein BAE_14235 PF13302 Acetyltransferase (GNAT) domain BAE_14240 PF09953 Uncharacterized protein conserved in bacteria (DUF2187) BAE_14250 PF07486 Cell Wall Hydrolase BAE_14255 PF01943 Polysaccharide biosynthesis protein BAE_14260 PF00578 AhpC/TSA family BAE_14270 PF00557 Metallopeptidase family M24 BAE_14270 PF01321 Creatinase/Prolidase N-terminal domain BAE_14275 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family BAE_14275 PF00356 Bacterial regulatory proteins, lacI family BAE_14280 PF03123 CAT RNA binding domain BAE_14280 PF00874 PRD domain BAE_14285 PF02378 Phosphotransferase system, EIIC BAE_14285 PF00367 phosphotransferase system, EIIB BAE_14285 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 BAE_14290 PF00381 PTS HPr component phosphorylation site BAE_14295 PF02896 PEP-utilising enzyme, TIM barrel domain BAE_14295 PF00391 PEP-utilising enzyme, mobile domain BAE_14295 PF05524 PEP-utilising enzyme, N-terminal BAE_14300 PF11132 Transcriptional regulator protein (SplA) BAE_14310 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain BAE_14310 PF00672 HAMP domain BAE_14310 PF02743 Cache domain BAE_14315 PF00106 short chain dehydrogenase BAE_14320 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase BAE_14320 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase BAE_14325 PF00188 Cysteine-rich secretory protein family BAE_14330 PF03717 Penicillin-binding Protein dimerisation domain BAE_14330 PF00905 Penicillin binding protein transpeptidase domain BAE_14335 PF00512 His Kinase A (phospho-acceptor) domain BAE_14335 PF08447 PAS fold BAE_14335 PF00989 PAS fold BAE_14335 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BAE_14340 PF00155 Aminotransferase class I and II BAE_14345 PF01545 Cation efflux family BAE_14345 PF16916 Dimerisation domain of Zinc Transporter BAE_14350 PF06271 RDD family BAE_14360 PF01584 CheW-like domain BAE_14360 PF00072 Response regulator receiver domain BAE_14365 PF14177 YkyB-like protein BAE_14380 PF07690 Major Facilitator Superfamily BAE_14385 PF03734 L,D-transpeptidase catalytic domain BAE_14385 PF01476 LysM domain BAE_14390 PF00149 Calcineurin-like phosphoesterase BAE_14390 PF10518 TAT (twin-arginine translocation) pathway signal sequence BAE_14400 PF10388 EAL-domain associated signalling protein domain BAE_14400 PF00563 EAL domain BAE_14405 PF05067 Manganese containing catalase BAE_14410 PF08796 Protein of unknown function (DUF1797) BAE_14415 PF04308 Ribonuclease H-like BAE_14420 PF14156 Antirepressor AbbA BAE_14430 PF03466 LysR substrate binding domain BAE_14430 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family BAE_14440 PF00258 Flavodoxin BAE_14450 PF00258 Flavodoxin BAE_14455 PF00132 Bacterial transferase hexapeptide (six repeats) BAE_14455 PF08503 Tetrahydrodipicolinate succinyltransferase N-terminal BAE_14455 PF14602 Hexapeptide repeat of succinyl-transferase BAE_14460 PF01546 Peptidase family M20/M25/M40 BAE_14460 PF07687 Peptidase dimerisation domain BAE_14465 PF03698 Uncharacterised protein family (UPF0180) BAE_14470 PF00924 Mechanosensitive ion channel BAE_14475 PF10417 C-terminal domain of 1-Cys peroxiredoxin BAE_14475 PF00578 AhpC/TSA family BAE_14480 PF00578 AhpC/TSA family BAE_14495 PF12804 MobA-like NTP transferase domain BAE_14500 PF00899 ThiF family BAE_14505 PF00994 Probable molybdopterin binding domain BAE_14505 PF03454 MoeA C-terminal region (domain IV) BAE_14505 PF03453 MoeA N-terminal region (domain I and II) BAE_14510 PF03205 Molybdopterin guanine dinucleotide synthesis protein B BAE_14515 PF02391 MoaE protein BAE_14520 PF02597 ThiS family BAE_14535 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion BAE_14540 PF00005 ABC transporter BAE_14545 PF12704 MacB-like periplasmic core domain BAE_14545 PF02687 FtsX-like permease family BAE_14550 PF08220 DeoR-like helix-turn-helix domain BAE_14550 PF00455 DeoR C terminal sensor domain BAE_14555 PF00294 pfkB family carbohydrate kinase BAE_14560 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 BAE_14560 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit BAE_14565 PF10502 Signal peptidase, peptidase S26 BAE_14575 PF00005 ABC transporter BAE_14575 PF12848 ABC transporter BAE_14585 PF02073 Thermophilic metalloprotease (M29) BAE_14595 PF04014 Antidote-toxin recognition MazE, bacterial antitoxin BAE_14595 PF18277 AbrB C-terminal domain BAE_14600 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BAE_14600 PF00512 His Kinase A (phospho-acceptor) domain BAE_14600 PF00989 PAS fold BAE_14605 PF06094 Gamma-glutamyl cyclotransferase, AIG2-like BAE_14610 PF02254 TrkA-N domain BAE_14610 PF02080 TrkA-C domain BAE_14615 PF01979 Amidohydrolase family BAE_14615 PF13382 Adenine deaminase C-terminal domain BAE_14620 PF17770 Ribonuclease J C-terminal domain BAE_14620 PF00753 Metallo-beta-lactamase superfamily BAE_14620 PF07521 Zn-dependent metallo-hydrolase RNA specificity domain BAE_14635 PF01327 Polypeptide deformylase BAE_14650 PF00676 Dehydrogenase E1 component BAE_14655 PF02780 Transketolase, C-terminal domain BAE_14655 PF02779 Transketolase, pyrimidine binding domain BAE_14660 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) BAE_14660 PF02817 e3 binding domain BAE_14660 PF00364 Biotin-requiring enzyme BAE_14665 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain BAE_14665 PF07992 Pyridine nucleotide-disulphide oxidoreductase BAE_14675 PF13790 SR1 protein BAE_14680 PF01276 Orn/Lys/Arg decarboxylase, major domain BAE_14680 PF03711 Orn/Lys/Arg decarboxylase, C-terminal domain BAE_14685 PF05256 Uncharacterised protein family (UPF0223) BAE_14690 PF06335 Protein of unknown function (DUF1054) BAE_14700 PF00459 Inositol monophosphatase family BAE_14740 PF14036 YlaH-like protein BAE_14745 PF09963 Uncharacterized protein conserved in bacteria (DUF2197) BAE_14750 PF09580 Sporulation lipoprotein YhcN/YlaJ (Spore_YhcN_YlaJ) BAE_14755 PF13638 PIN domain BAE_14755 PF02562 PhoH-like protein BAE_14765 PF04960 Glutaminase BAE_14770 PF07408 Protein of unknown function (DUF1507) BAE_14775 PF01098 Cell cycle protein BAE_14780 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain BAE_14780 PF02436 Conserved carboxylase domain BAE_14780 PF02785 Biotin carboxylase C-terminal domain BAE_14780 PF00289 Biotin carboxylase, N-terminal domain BAE_14780 PF00682 HMGL-like BAE_14780 PF00364 Biotin-requiring enzyme BAE_14790 PF02628 Cytochrome oxidase assembly protein BAE_14795 PF01040 UbiA prenyltransferase family BAE_14800 PF02790 Cytochrome C oxidase subunit II, transmembrane domain BAE_14800 PF00116 Cytochrome C oxidase subunit II, periplasmic domain BAE_14800 PF00034 Cytochrome c BAE_14805 PF00115 Cytochrome C and Quinol oxidase polypeptide I BAE_14810 PF00510 Cytochrome c oxidase subunit III BAE_14815 PF03626 Prokaryotic Cytochrome C oxidase subunit IV BAE_14820 PF09678 Cytochrome c oxidase caa3 assembly factor (Caa3_CtaG) BAE_14825 PF08868 YugN-like family BAE_14830 PF00571 CBS domain BAE_14835 PF14504 CAP-associated N-terminal BAE_14835 PF00188 Cysteine-rich secretory protein family BAE_14840 PF14071 Putative coat protein BAE_14845 PF14003 YlbE-like protein BAE_14855 PF06133 Control of competence regulator ComK, YlbF/YmcA BAE_14860 PF09902 Uncharacterized protein conserved in bacteria (DUF2129) BAE_14870 PF01467 Cytidylyltransferase-like BAE_14875 PF07670 Nucleoside recognition BAE_14880 PF01734 Patatin-like phospholipase BAE_14885 PF13180 PDZ domain BAE_14885 PF05362 Lon protease (S16) C-terminal proteolytic domain BAE_14890 PF05636 HIGH Nucleotidyl Transferase BAE_14895 PF02620 Large ribosomal RNA subunit accumulation protein YceD BAE_14900 PF01783 Ribosomal L32p protein family BAE_14910 PF00583 Acetyltransferase (GNAT) family BAE_14915 PF02558 Ketopantoate reductase PanE/ApbA BAE_14915 PF08546 Ketopantoate reductase PanE/ApbA C terminal BAE_14920 PF10079 Bacillithiol biosynthesis BshC BAE_14925 PF02381 MraZ protein, putative antitoxin-like BAE_14930 PF01795 MraW methylase family BAE_14945 PF00905 Penicillin binding protein transpeptidase domain BAE_14945 PF03717 Penicillin-binding Protein dimerisation domain BAE_14945 PF03793 PASTA domain BAE_14950 PF01225 Mur ligase family, catalytic domain BAE_14950 PF02875 Mur ligase family, glutamate ligase domain BAE_14950 PF08245 Mur ligase middle domain BAE_14955 PF00953 Glycosyl transferase family 4 BAE_14955 PF10555 Phospho-N-acetylmuramoyl-pentapeptide-transferase signature 1 BAE_14960 PF08245 Mur ligase middle domain BAE_14960 PF02875 Mur ligase family, glutamate ligase domain BAE_14965 PF01098 Cell cycle protein BAE_14970 PF04101 Glycosyltransferase family 28 C-terminal domain BAE_14970 PF03033 Glycosyltransferase family 28 N-terminal domain BAE_14975 PF01565 FAD binding domain BAE_14975 PF02873 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain BAE_14980 PF08478 POTRA domain, FtsQ-type BAE_14985 PF05949 Bacterial protein of unknown function (DUF881) BAE_14990 PF05949 Bacterial protein of unknown function (DUF881) BAE_14995 PF06947 Protein of unknown function (DUF1290) BAE_15000 PF02491 SHS2 domain inserted in FTSA BAE_15005 PF00091 Tubulin/FtsZ family, GTPase domain BAE_15005 PF12327 FtsZ family, C-terminal domain BAE_15010 PF00082 Subtilase family BAE_15010 PF05922 Peptidase inhibitor I9 BAE_15015 PF03419 Sporulation factor SpoIIGA BAE_15020 PF04545 Sigma-70, region 4 BAE_15020 PF04542 Sigma-70 region 2 BAE_15025 PF04545 Sigma-70, region 4 BAE_15025 PF04542 Sigma-70 region 2 BAE_15025 PF04539 Sigma-70 region 3 BAE_15030 PF04198 Putative sugar-binding domain BAE_15045 PF03608 PTS system enzyme II sorbitol-specific factor BAE_15050 PF07663 Sorbitol phosphotransferase enzyme II C-terminus BAE_15050 PF03612 Sorbitol phosphotransferase enzyme II N-terminus BAE_15055 PF03829 PTS system glucitol/sorbitol-specific IIA component BAE_15060 PF00005 ABC transporter BAE_15065 PF05239 PRC-barrel domain BAE_15075 PF01168 Alanine racemase, N-terminal domain BAE_15080 PF04472 Cell division protein SepF BAE_15085 PF02325 YGGT family BAE_15090 PF01479 S4 domain BAE_15090 PF17774 Putative RNA-binding domain in YlmH BAE_15095 PF05103 DivIVA protein BAE_15100 PF08264 Anticodon-binding domain of tRNA BAE_15100 PF00133 tRNA synthetases class I (I, L, M and V) BAE_15105 PF01258 Prokaryotic dksA/traR C4-type zinc finger BAE_15110 PF01252 Signal peptidase (SPase) II BAE_15115 PF01479 S4 domain BAE_15115 PF00849 RNA pseudouridylate synthase BAE_15120 PF00156 Phosphoribosyl transferase domain BAE_15125 PF00860 Permease family BAE_15130 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain BAE_15130 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain BAE_15135 PF01979 Amidohydrolase family BAE_15140 PF00988 Carbamoyl-phosphate synthase small chain, CPSase domain BAE_15140 PF00117 Glutamine amidotransferase class-I BAE_15145 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain BAE_15145 PF02787 Carbamoyl-phosphate synthetase large chain, oligomerisation domain BAE_15145 PF02142 MGS-like domain BAE_15150 PF10418 Iron-sulfur cluster binding domain of dihydroorotate dehydrogenase B BAE_15155 PF01180 Dihydroorotate dehydrogenase BAE_15160 PF00215 Orotidine 5'-phosphate decarboxylase / HUMPS family BAE_15165 PF00156 Phosphoribosyl transferase domain BAE_15175 PF01507 Phosphoadenosine phosphosulfate reductase family BAE_15180 PF01384 Phosphate transporter family BAE_15185 PF01747 ATP-sulfurylase BAE_15185 PF14306 PUA-like domain BAE_15195 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases BAE_15200 PF01903 CbiX BAE_15215 PF00690 Cation transporter/ATPase, N-terminus BAE_15215 PF00689 Cation transporting ATPase, C-terminus BAE_15220 PF03755 YicC-like family, N-terminal region BAE_15220 PF08340 Domain of unknown function (DUF1732) BAE_15225 PF04025 Domain of unknown function (DUF370) BAE_15230 PF00625 Guanylate kinase BAE_15235 PF01192 RNA polymerase Rpb6 BAE_15240 PF02441 Flavoprotein BAE_15240 PF04127 DNA / pantothenate metabolism flavoprotein BAE_15245 PF18074 Primosomal protein N C-terminal domain BAE_15245 PF00271 Helicase conserved C-terminal domain BAE_15245 PF18319 PriA DNA helicase Cys-rich region (CRR) domain BAE_15245 PF04851 Type III restriction enzyme, res subunit BAE_15245 PF17764 3′ DNA-binding domain (3′BD) BAE_15250 PF01327 Polypeptide deformylase BAE_15255 PF00551 Formyl transferase BAE_15255 PF02911 Formyl transferase, C-terminal domain BAE_15260 PF01189 16S rRNA methyltransferase RsmB/F BAE_15260 PF01029 NusB family BAE_15265 PF04055 Radical SAM superfamily BAE_15275 PF03793 PASTA domain BAE_15275 PF00069 Protein kinase domain BAE_15280 PF03193 RsgA GTPase BAE_15280 PF16745 RsgA N-terminal domain BAE_15285 PF00834 Ribulose-phosphate 3 epimerase family BAE_15290 PF04265 Thiamin pyrophosphokinase, vitamin B1 binding domain BAE_15290 PF04263 Thiamin pyrophosphokinase, catalytic domain BAE_15295 PF08183 Stage V sporulation protein family BAE_15300 PF00830 Ribosomal L28 family BAE_15305 PF03780 Asp23 family, cell envelope-related function BAE_15310 PF13684 Dihydroxyacetone kinase family BAE_15310 PF02734 DAK2 domain BAE_15315 PF03315 Serine dehydratase beta chain BAE_15315 PF01842 ACT domain BAE_15320 PF03313 Serine dehydratase alpha chain BAE_15325 PF00271 Helicase conserved C-terminal domain BAE_15325 PF17191 RecG wedge domain BAE_15325 PF00270 DEAD/DEAH box helicase BAE_15335 PF02504 Fatty acid synthesis protein BAE_15340 PF00698 Acyl transferase domain BAE_15350 PF00550 Phosphopantetheine attachment site BAE_15355 PF14622 Ribonuclease-III-like BAE_15355 PF00035 Double-stranded RNA binding motif BAE_15360 PF02463 RecF/RecN/SMC N terminal domain BAE_15360 PF06470 SMC proteins Flexible Hinge Domain BAE_15365 PF02881 SRP54-type protein, helical bundle domain BAE_15365 PF00448 SRP54-type protein, GTPase domain BAE_15370 PF04297 Putative helix-turn-helix protein, YlxM / p13 like BAE_15375 PF02881 SRP54-type protein, helical bundle domain BAE_15375 PF02978 Signal peptide binding domain BAE_15375 PF00448 SRP54-type protein, GTPase domain BAE_15380 PF00886 Ribosomal protein S16 BAE_15390 PF11068 YlqD protein BAE_15395 PF01782 RimM N-terminal domain BAE_15395 PF05239 PRC-barrel domain BAE_15400 PF01746 tRNA (Guanine-1)-methyltransferase BAE_15405 PF01245 Ribosomal protein L19 BAE_15410 PF01926 50S ribosome-binding GTPase BAE_15415 PF01351 Ribonuclease HII BAE_15425 PF01312 FlhB HrpN YscU SpaS Family BAE_15430 PF00549 CoA-ligase BAE_15430 PF08442 ATP-grasp domain BAE_15435 PF00549 CoA-ligase BAE_15435 PF02629 CoA binding domain BAE_15445 PF01131 DNA topoisomerase BAE_15445 PF01751 Toprim domain BAE_15445 PF01396 Topoisomerase DNA binding C4 zinc finger BAE_15450 PF01134 Glucose inhibited division protein A BAE_15455 PF02899 Phage integrase, N-terminal SAM-like domain BAE_15455 PF00589 Phage integrase family BAE_15460 PF00227 Proteasome subunit BAE_15465 PF00004 ATPase family associated with various cellular activities (AAA) BAE_15465 PF07724 AAA domain (Cdc48 subfamily) BAE_15465 PF10431 C-terminal, D2-small domain, of ClpB protein BAE_15470 PF08222 CodY helix-turn-helix domain BAE_15470 PF06018 CodY GAF-like domain BAE_15475 PF00460 Flagella basal body rod protein BAE_15480 PF06429 Flagellar basal body rod FlgEFG protein C-terminal BAE_15480 PF00460 Flagella basal body rod protein BAE_15485 PF02049 Flagellar hook-basal body complex protein FliE BAE_15490 PF08345 Flagellar M-ring protein C-terminal BAE_15490 PF01514 Secretory protein of YscJ/FliF family BAE_15495 PF14842 FliG N-terminal domain BAE_15495 PF14841 FliG middle domain BAE_15495 PF01706 FliG C-terminal domain BAE_15500 PF02108 Flagellar assembly protein FliH BAE_15505 PF02874 ATP synthase alpha/beta family, beta-barrel domain BAE_15505 PF18269 T3SS EscN ATPase C-terminal domain BAE_15505 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain BAE_15510 PF02050 Flagellar FliJ protein BAE_15515 PF03448 MgtE intracellular N domain BAE_15520 PF02120 Flagellar hook-length control protein FliK BAE_15525 PF03963 Flagellar hook capping protein - N-terminal region BAE_15530 PF06429 Flagellar basal body rod FlgEFG protein C-terminal BAE_15530 PF00460 Flagella basal body rod protein BAE_15535 PF06289 Flagellar and Swarming motility proteins BAE_15540 PF03748 Flagellar basal body-associated protein FliL BAE_15545 PF02154 Flagellar motor switch protein FliM BAE_15545 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term BAE_15550 PF04509 CheC-like family BAE_15550 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term BAE_15555 PF00072 Response regulator receiver domain BAE_15560 PF04347 Flagellar biosynthesis protein, FliO BAE_15565 PF00813 FliP family BAE_15570 PF01313 Bacterial export proteins, family 3 BAE_15575 PF01311 Bacterial export proteins, family 1 BAE_15580 PF01312 FlhB HrpN YscU SpaS Family BAE_15585 PF00771 FHIPEP family BAE_15590 PF00448 SRP54-type protein, GTPase domain BAE_15595 PF10609 NUBPL iron-transfer P-loop NTPase BAE_15600 PF01339 CheB methylesterase BAE_15600 PF00072 Response regulator receiver domain BAE_15605 PF02895 Signal transducing histidine kinase, homodimeric domain BAE_15605 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BAE_15605 PF01627 Hpt domain BAE_15605 PF01584 CheW-like domain BAE_15605 PF07194 P2 response regulator binding domain BAE_15610 PF01584 CheW-like domain BAE_15615 PF04509 CheC-like family BAE_15620 PF03975 CheD chemotactic sensory transduction BAE_15625 PF04539 Sigma-70 region 3 BAE_15625 PF04545 Sigma-70, region 4 BAE_15625 PF04542 Sigma-70 region 2 BAE_15635 PF00318 Ribosomal protein S2 BAE_15640 PF00889 Elongation factor TS BAE_15645 PF00696 Amino acid kinase family BAE_15650 PF01765 Ribosome recycling factor BAE_15655 PF01255 Putative undecaprenyl diphosphate synthase BAE_15665 PF02670 1-deoxy-D-xylulose 5-phosphate reductoisomerase BAE_15665 PF08436 1-deoxy-D-xylulose 5-phosphate reductoisomerase C-terminal domain BAE_15665 PF13288 DXP reductoisomerase C-terminal domain BAE_15670 PF17820 PDZ domain BAE_15670 PF02163 Peptidase family M50 BAE_15675 PF03129 Anticodon binding domain BAE_15675 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) BAE_15675 PF04073 Aminoacyl-tRNA editing domain BAE_15680 PF17657 Bacterial DNA polymerase III alpha subunit finger domain BAE_15680 PF14579 Helix-hairpin-helix motif BAE_15680 PF02811 PHP domain BAE_15680 PF00929 Exonuclease BAE_15680 PF07733 Bacterial DNA polymerase III alpha NTPase domain BAE_15680 PF11490 DNA polymerase III polC-type N-terminus II BAE_15680 PF14480 DNA polymerase III polC-type N-terminus I BAE_15685 PF00759 Glycosyl hydrolase family 9 BAE_15685 PF00942 Cellulose binding domain BAE_15690 PF02011 Glycosyl hydrolase family 48 BAE_15690 PF00759 Glycosyl hydrolase family 9 BAE_15690 PF00942 Cellulose binding domain BAE_15710 PF02576 RimP N-terminal domain BAE_15710 PF17384 RimP C-terminal SH3 domain BAE_15715 PF00575 S1 RNA binding domain BAE_15715 PF13184 NusA-like KH domain BAE_15715 PF08529 NusA N-terminal domain BAE_15720 PF04296 Protein of unknown function (DUF448) BAE_15725 PF01248 Ribosomal protein L7Ae/L30e/S12e/Gadd45 family BAE_15730 PF00009 Elongation factor Tu GTP binding domain BAE_15730 PF11987 Translation-initiation factor 2 BAE_15730 PF04760 Translation initiation factor IF-2, N-terminal region BAE_15735 PF04456 Protein of unknown function (DUF503) BAE_15740 PF02033 Ribosome-binding factor A BAE_15745 PF16198 tRNA pseudouridylate synthase B C-terminal domain BAE_15745 PF01509 TruB family pseudouridylate synthase (N terminal domain) BAE_15750 PF06574 FAD synthetase BAE_15750 PF01687 Riboflavin kinase BAE_15755 PF00312 Ribosomal protein S15 BAE_15760 PF03726 Polyribonucleotide nucleotidyltransferase, RNA binding domain BAE_15760 PF01138 3' exoribonuclease family, domain 1 BAE_15760 PF00013 KH domain BAE_15760 PF00575 S1 RNA binding domain BAE_15760 PF03725 3' exoribonuclease family, domain 2 BAE_15765 PF01522 Polysaccharide deacetylase BAE_15770 PF00675 Insulinase (Peptidase family M16) BAE_15770 PF05193 Peptidase M16 inactive domain BAE_15780 PF05239 PRC-barrel domain BAE_15785 PF16924 Dipicolinate synthase subunit A N-terminal domain BAE_15785 PF01262 Alanine dehydrogenase/PNT, C-terminal domain BAE_15790 PF02441 Flavoprotein BAE_15795 PF02774 Semialdehyde dehydrogenase, dimerisation domain BAE_15795 PF01118 Semialdehyde dehydrogenase, NAD binding domain BAE_15800 PF00696 Amino acid kinase family BAE_15800 PF13840 ACT domain BAE_15805 PF00701 Dihydrodipicolinate synthetase family BAE_15810 PF07521 Zn-dependent metallo-hydrolase RNA specificity domain BAE_15810 PF17770 Ribonuclease J C-terminal domain BAE_15810 PF00753 Metallo-beta-lactamase superfamily BAE_15815 PF00574 Clp protease BAE_15820 PF14035 YlzJ-like protein BAE_15825 PF09397 Ftsk gamma domain BAE_15825 PF17854 FtsK alpha domain BAE_15825 PF01580 FtsK/SpoIIIE family BAE_15830 PF00392 Bacterial regulatory proteins, gntR family BAE_15830 PF07702 UTRA domain BAE_15835 PF07690 Major Facilitator Superfamily BAE_15840 PF03176 MMPL family BAE_15845 PF05193 Peptidase M16 inactive domain BAE_15850 PF05193 Peptidase M16 inactive domain BAE_15850 PF00675 Insulinase (Peptidase family M16) BAE_15860 PF03176 MMPL family BAE_15870 PF11588 Protein of unknown function (DUF3243) BAE_15875 PF11868 Protein of unknown function (DUF3388) BAE_15880 PF13464 Domain of unknown function (DUF4115) BAE_15885 PF01066 CDP-alcohol phosphatidyltransferase BAE_15890 PF02464 Competence-damaged protein BAE_15890 PF18146 Damage-inducible protein CinA KH domain BAE_15890 PF00994 Probable molybdopterin binding domain BAE_15895 PF00154 recA bacterial DNA recombination protein BAE_15900 PF12072 Domain of unknown function (DUF3552) BAE_15900 PF01966 HD domain BAE_15900 PF00013 KH domain BAE_15905 PF13277 YmdB-like protein BAE_15910 PF04232 Stage V sporulation protein S (SpoVS) BAE_15915 PF00873 AcrB/AcrD/AcrF family BAE_15920 PF00107 Zinc-binding dehydrogenase BAE_15920 PF08240 Alcohol dehydrogenase GroES-like domain BAE_15925 PF00155 Aminotransferase class I and II BAE_15930 PF00919 Uncharacterized protein family UPF0004 BAE_15930 PF01938 TRAM domain BAE_15930 PF04055 Radical SAM superfamily BAE_15935 PF06133 Control of competence regulator ComK, YlbF/YmcA BAE_15940 PF10628 Outer spore coat protein E (CotE) BAE_15945 PF00488 MutS domain V BAE_15945 PF01624 MutS domain I BAE_15945 PF05188 MutS domain II BAE_15945 PF05192 MutS domain III BAE_15945 PF05190 MutS family domain IV BAE_15950 PF01119 DNA mismatch repair protein, C-terminal domain BAE_15950 PF08676 MutL C terminal dimerisation domain BAE_15955 PF17735 Biofilm surface layer A BAE_15970 PF02559 CarD-like/TRCF domain BAE_15975 PF05908 Poly-gamma-glutamate hydrolase BAE_15980 PF18801 response regulator aspartate phosphatase H, N terminal BAE_15985 PF00082 Subtilase family BAE_15990 PF05908 Poly-gamma-glutamate hydrolase BAE_15995 PF02566 OsmC-like protein BAE_16000 PF00893 Small Multidrug Resistance protein BAE_16005 PF00893 Small Multidrug Resistance protein BAE_16020 PF12788 YmaF family BAE_16030 PF17209 Hfq protein BAE_16045 PF07972 NrdI Flavodoxin like BAE_16050 PF02867 Ribonucleotide reductase, barrel domain BAE_16050 PF08343 Ribonucleotide reductase N-terminal BAE_16050 PF00317 Ribonucleotide reductase, all-alpha domain BAE_16055 PF00268 Ribonucleotide reductase, small chain BAE_16065 PF05036 Sporulation related domain BAE_16065 PF01520 N-acetylmuramoyl-L-alanine amidase BAE_16070 PF00004 ATPase family associated with various cellular activities (AAA) BAE_16070 PF17866 AAA lid domain BAE_16075 PF13167 GTP-binding GTPase N-terminal BAE_16075 PF01926 50S ribosome-binding GTPase BAE_16075 PF16360 GTP-binding GTPase Middle Region BAE_16080 PF06838 Methionine gamma-lyase BAE_16085 PF13411 MerR HTH family regulatory protein BAE_16090 PF03951 Glutamine synthetase, beta-Grasp domain BAE_16090 PF00120 Glutamine synthetase, catalytic domain BAE_16095 PF00082 Subtilase family BAE_16130 PF17874 MalT-like TPR region BAE_16130 PF18801 response regulator aspartate phosphatase H, N terminal BAE_16145 PF04740 LXG domain of WXG superfamily BAE_16150 PF04634 Protein of unknown function, DUF600 BAE_16165 PF01569 PAP2 superfamily BAE_16170 PF08818 Domain of unknown function (DU1801) BAE_16190 PF18801 response regulator aspartate phosphatase H, N terminal BAE_16200 PF06912 Protein of unknown function (DUF1275) BAE_16205 PF01068 ATP dependent DNA ligase domain BAE_16210 PF02735 Ku70/Ku80 beta-barrel domain BAE_16215 PF09954 Uncharacterized protein conserved in bacteria (DUF2188) BAE_16225 PF02082 Transcriptional regulator BAE_16230 PF05368 NmrA-like family BAE_16245 PF02754 Cysteine-rich domain BAE_16250 PF11870 Domain of unknown function (DUF3390) BAE_16250 PF13183 4Fe-4S dicluster domain BAE_16250 PF02589 LUD domain BAE_16255 PF02589 LUD domain BAE_16275 PF04239 Protein of unknown function (DUF421) BAE_16280 PF16295 Tetracyclin repressor-like, C-terminal domain BAE_16280 PF00440 Bacterial regulatory proteins, tetR family BAE_16285 PF00667 FAD binding domain BAE_16285 PF00258 Flavodoxin BAE_16285 PF00067 Cytochrome P450 BAE_16285 PF00175 Oxidoreductase NAD-binding domain BAE_16290 PF00089 Trypsin BAE_16295 PF13231 Dolichyl-phosphate-mannose-protein mannosyltransferase BAE_16300 PF14040 Deoxyribonuclease NucA/NucB BAE_16305 PF01740 STAS domain BAE_16310 PF16800 IseA DL-endopeptidase inhibitor BAE_16320 PF00717 Peptidase S24-like BAE_16320 PF01726 LexA DNA binding domain BAE_16325 PF01476 LysM domain BAE_16330 PF00239 Resolvase, N terminal domain BAE_16335 PF05979 Bacterial protein of unknown function (DUF896) BAE_16340 PF02779 Transketolase, pyrimidine binding domain BAE_16340 PF02780 Transketolase, C-terminal domain BAE_16340 PF00456 Transketolase, thiamine diphosphate binding domain BAE_16345 PF10747 Sporulation inhibitor of replication protein SirA BAE_16350 PF03672 Uncharacterised protein family (UPF0154) BAE_16355 PF09388 Spo0E like sporulation regulatory protein BAE_16360 PF02683 Cytochrome C biogenesis protein transmembrane region BAE_16365 PF07301 Protein of unknown function (DUF1453) BAE_16370 PF11084 Protein of unknown function (DUF2621) BAE_16380 PF08179 Small acid-soluble spore protein P family BAE_16390 PF00330 Aconitase family (aconitate hydratase) BAE_16390 PF00694 Aconitase C-terminal domain BAE_16395 PF00578 AhpC/TSA family BAE_16400 PF13040 Fur-regulated basic protein B BAE_16405 PF08177 Small acid-soluble spore protein N family BAE_16415 PF03061 Thioesterase superfamily BAE_16425 PF01521 Iron-sulphur cluster biosynthesis BAE_16430 PF02660 Glycerol-3-phosphate acyltransferase BAE_16435 PF13380 CoA binding domain BAE_16440 PF00204 DNA gyrase B BAE_16440 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BAE_16440 PF01751 Toprim domain BAE_16440 PF00986 DNA gyrase B subunit, carboxyl terminus BAE_16445 PF00521 DNA gyrase/topoisomerase IV, subunit A BAE_16445 PF03989 DNA gyrase C-terminal domain, beta-propeller BAE_16455 PF07690 Major Facilitator Superfamily BAE_16460 PF00180 Isocitrate/isopropylmalate dehydrogenase BAE_16465 PF12464 Maltose acetyltransferase BAE_16465 PF14602 Hexapeptide repeat of succinyl-transferase BAE_16470 PF01451 Low molecular weight phosphotyrosine protein phosphatase BAE_16475 PF02040 Arsenical pump membrane protein BAE_16480 PF01022 Bacterial regulatory protein, arsR family BAE_16495 PF01323 DSBA-like thioredoxin domain BAE_16500 PF02525 Flavodoxin-like fold BAE_16510 PF00440 Bacterial regulatory proteins, tetR family BAE_16515 PF02525 Flavodoxin-like fold BAE_16520 PF01638 HxlR-like helix-turn-helix BAE_16525 PF00291 Pyridoxal-phosphate dependent enzyme BAE_16530 PF01042 Endoribonuclease L-PSP BAE_16545 PF01494 FAD binding domain BAE_16565 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region BAE_16570 PF07859 alpha/beta hydrolase fold BAE_16570 PF00934 PE family BAE_16575 PF13411 MerR HTH family regulatory protein BAE_16580 PF00232 Glycosyl hydrolase family 1 BAE_16585 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 BAE_16585 PF02378 Phosphotransferase system, EIIC BAE_16585 PF00367 phosphotransferase system, EIIB BAE_16590 PF00874 PRD domain BAE_16590 PF03123 CAT RNA binding domain BAE_16600 PF00512 His Kinase A (phospho-acceptor) domain BAE_16600 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BAE_16605 PF00486 Transcriptional regulatory protein, C terminal BAE_16605 PF00072 Response regulator receiver domain BAE_16610 PF02055 Glycosyl hydrolase family 30 TIM-barrel domain BAE_16610 PF17189 Glycosyl hydrolase family 30 beta sandwich domain BAE_16615 PF03422 Carbohydrate binding module (family 6) BAE_16615 PF04616 Glycosyl hydrolases family 43 BAE_16620 PF00171 Aldehyde dehydrogenase family BAE_16625 PF02056 Family 4 glycosyl hydrolase BAE_16625 PF11975 Family 4 glycosyl hydrolase C-terminal domain BAE_16650 PF00834 Ribulose-phosphate 3 epimerase family BAE_16665 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 BAE_16675 PF00583 Acetyltransferase (GNAT) family BAE_16680 PF00155 Aminotransferase class I and II BAE_16680 PF00392 Bacterial regulatory proteins, gntR family BAE_16695 PF01047 MarR family BAE_16700 PF07690 Major Facilitator Superfamily BAE_16705 PF01116 Fructose-bisphosphate aldolase class-II BAE_16710 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit BAE_16710 PF02378 Phosphotransferase system, EIIC BAE_16710 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 BAE_16715 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 BAE_16715 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit BAE_16720 PF00294 pfkB family carbohydrate kinase BAE_16725 PF01380 SIS domain BAE_16725 PF01418 Helix-turn-helix domain, rpiR family BAE_16730 PF13091 PLD-like domain BAE_16750 PF00171 Aldehyde dehydrogenase family BAE_16755 PF00258 Flavodoxin BAE_16755 PF00175 Oxidoreductase NAD-binding domain BAE_16755 PF00667 FAD binding domain BAE_16760 PF01077 Nitrite and sulphite reductase 4Fe-4S domain BAE_16760 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain BAE_16765 PF16177 Acetyl-coenzyme A synthetase N-terminus BAE_16765 PF00501 AMP-binding enzyme BAE_16765 PF13193 AMP-binding enzyme C-terminal domain BAE_16770 PF01039 Carboxyl transferase domain BAE_16775 PF00378 Enoyl-CoA hydratase/isomerase BAE_16780 PF00682 HMGL-like BAE_16785 PF00364 Biotin-requiring enzyme BAE_16790 PF02785 Biotin carboxylase C-terminal domain BAE_16790 PF00289 Biotin carboxylase, N-terminal domain BAE_16790 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain BAE_16795 PF00501 AMP-binding enzyme BAE_16795 PF13193 AMP-binding enzyme C-terminal domain BAE_16800 PF02770 Acyl-CoA dehydrogenase, middle domain BAE_16800 PF00441 Acyl-CoA dehydrogenase, C-terminal domain BAE_16800 PF02771 Acyl-CoA dehydrogenase, N-terminal domain BAE_16805 PF02638 Glycosyl hydrolase-like 10 BAE_16815 PF00455 DeoR C terminal sensor domain BAE_16815 PF08220 DeoR-like helix-turn-helix domain BAE_16820 PF14552 Tautomerase enzyme BAE_16830 PF05651 Putative sugar diacid recognition BAE_16830 PF13556 PucR C-terminal helix-turn-helix domain BAE_16830 PF17853 GGDEF-like domain BAE_16835 PF01565 FAD binding domain BAE_16835 PF02913 FAD linked oxidases, C-terminal domain BAE_16840 PF02754 Cysteine-rich domain BAE_16840 PF13183 4Fe-4S dicluster domain BAE_16845 PF03323 Bacillus/Clostridium GerA spore germination protein BAE_16850 PF03845 Spore germination protein BAE_16860 PF12728 Helix-turn-helix domain BAE_16865 PF04138 GtrA-like protein BAE_16870 PF00483 Nucleotidyl transferase BAE_16875 PF09335 SNARE associated Golgi protein BAE_16880 PF02602 Uroporphyrinogen-III synthase HemD BAE_16890 PF00296 Luciferase-like monooxygenase BAE_16915 PF01554 MatE BAE_16920 PF02113 D-Ala-D-Ala carboxypeptidase 3 (S13) family BAE_16925 PF01095 Pectinesterase BAE_16930 PF04239 Protein of unknown function (DUF421) BAE_16935 PF00355 Rieske [2Fe-2S] domain BAE_16940 PF18267 Rubredoxin NAD+ reductase C-terminal domain BAE_16940 PF04324 BFD-like [2Fe-2S] binding domain BAE_16940 PF01077 Nitrite and sulphite reductase 4Fe-4S domain BAE_16940 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain BAE_16940 PF07992 Pyridine nucleotide-disulphide oxidoreductase BAE_16945 PF00384 Molybdopterin oxidoreductase BAE_16945 PF01568 Molydopterin dinucleotide binding domain BAE_16945 PF04879 Molybdopterin oxidoreductase Fe4S4 domain BAE_16950 PF07992 Pyridine nucleotide-disulphide oxidoreductase BAE_16950 PF18267 Rubredoxin NAD+ reductase C-terminal domain BAE_16950 PF04324 BFD-like [2Fe-2S] binding domain BAE_16950 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain BAE_16955 PF07690 Major Facilitator Superfamily BAE_16960 PF07992 Pyridine nucleotide-disulphide oxidoreductase BAE_16960 PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster BAE_16965 PF01493 GXGXG motif BAE_16965 PF00310 Glutamine amidotransferases class-II BAE_16965 PF01645 Conserved region in glutamate synthase BAE_16965 PF04898 Glutamate synthase central domain BAE_16970 PF03466 LysR substrate binding domain BAE_16970 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family BAE_16975 PF00664 ABC transporter transmembrane region BAE_16975 PF00005 ABC transporter BAE_16980 PF00005 ABC transporter BAE_16980 PF00664 ABC transporter transmembrane region BAE_16985 PF06445 GyrI-like small molecule binding domain BAE_16985 PF13411 MerR HTH family regulatory protein BAE_16990 PF00583 Acetyltransferase (GNAT) family BAE_16995 PF00171 Aldehyde dehydrogenase family BAE_17000 PF01472 PUA domain BAE_17000 PF00696 Amino acid kinase family BAE_17005 PF14748 Pyrroline-5-carboxylate reductase dimerisation BAE_17005 PF03807 NADP oxidoreductase coenzyme F420-dependent BAE_17010 PF00067 Cytochrome P450 BAE_17015 PF01568 Molydopterin dinucleotide binding domain BAE_17015 PF00384 Molybdopterin oxidoreductase BAE_17015 PF04879 Molybdopterin oxidoreductase Fe4S4 domain BAE_17020 PF00457 Glycosyl hydrolases family 11 BAE_17025 PF00370 FGGY family of carbohydrate kinases, N-terminal domain BAE_17025 PF02782 FGGY family of carbohydrate kinases, C-terminal domain BAE_17030 PF01261 Xylose isomerase-like TIM barrel BAE_17035 PF00480 ROK family BAE_17040 PF04616 Glycosyl hydrolases family 43 BAE_17040 PF17851 Beta xylosidase C-terminal Concanavalin A-like domain BAE_17050 PF01588 Putative tRNA binding domain BAE_17060 PF14158 YndJ-like protein BAE_17065 PF13761 Domain of unknown function (DUF4166) BAE_17075 PF00440 Bacterial regulatory proteins, tetR family BAE_17075 PF13305 Tetracyclin repressor-like, C-terminal domain BAE_17080 PF00753 Metallo-beta-lactamase superfamily BAE_17085 PF06445 GyrI-like small molecule binding domain BAE_17090 PF13280 WYL domain BAE_17090 PF08279 HTH domain BAE_17100 PF01022 Bacterial regulatory protein, arsR family BAE_17105 PF00324 Amino acid permease BAE_17120 PF03972 MmgE/PrpD family BAE_17125 PF00285 Citrate synthase, C-terminal domain BAE_17130 PF04238 Protein of unknown function (DUF420) BAE_17140 PF01476 LysM domain BAE_17140 PF06725 3D domain BAE_17145 PF00270 DEAD/DEAH box helicase BAE_17145 PF00570 HRDC domain BAE_17145 PF00271 Helicase conserved C-terminal domain BAE_17145 PF16124 RecQ zinc-binding BAE_17145 PF09382 RQC domain BAE_17155 PF01258 Prokaryotic dksA/traR C4-type zinc finger BAE_17165 PF08000 Bacterial PH domain BAE_17180 PF00171 Aldehyde dehydrogenase family BAE_17185 PF13249 Squalene-hopene cyclase N-terminal domain BAE_17185 PF13243 Squalene-hopene cyclase C-terminal domain BAE_17190 PF02777 Iron/manganese superoxide dismutases, C-terminal domain BAE_17190 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain BAE_17195 PF01758 Sodium Bile acid symporter family BAE_17200 PF02817 e3 binding domain BAE_17200 PF00364 Biotin-requiring enzyme BAE_17200 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) BAE_17205 PF02779 Transketolase, pyrimidine binding domain BAE_17205 PF16870 2-oxoglutarate dehydrogenase C-terminal BAE_17205 PF00676 Dehydrogenase E1 component BAE_17205 PF16078 2-oxoglutarate dehydrogenase N-terminus BAE_17210 PF00092 von Willebrand factor type A domain BAE_17215 PF07728 AAA domain (dynein-related subfamily) BAE_17220 PF00080 Copper/zinc superoxide dismutase (SODC) BAE_17220 PF13627 Prokaryotic lipoprotein-attachment site BAE_17225 PF01476 LysM domain BAE_17225 PF00877 NlpC/P60 family BAE_17230 PF10372 Bacterial membrane-spanning protein N-terminus BAE_17230 PF02457 DisA bacterial checkpoint controller nucleotide-binding BAE_17235 PF01554 MatE BAE_17240 PF02585 GlcNAc-PI de-N-acetylase BAE_17245 PF08830 Protein of unknown function (DUF1806) BAE_17255 PF00892 EamA-like transporter family BAE_17270 PF01638 HxlR-like helix-turn-helix BAE_17275 PF00881 Nitroreductase family BAE_17280 PF11755 Protein of unknown function (DUF3311) BAE_17285 PF00474 Sodium:solute symporter family BAE_17290 PF01471 Putative peptidoglycan binding domain BAE_17290 PF03572 Peptidase family S41 BAE_17290 PF17820 PDZ domain BAE_17295 PF08241 Methyltransferase domain BAE_17305 PF02557 D-alanyl-D-alanine carboxypeptidase BAE_17310 PF01048 Phosphorylase superfamily BAE_17315 PF14191 YodL-like BAE_17320 PF01569 PAP2 superfamily BAE_17325 PF14162 YozD-like protein BAE_17335 PF06855 YozE SAM-like fold BAE_17340 PF14122 YokU-like protein, putative antitoxin BAE_17345 PF12544 Lysine-2,3-aminomutase BAE_17350 PF13426 PAS domain BAE_17350 PF02954 Bacterial regulatory protein, Fis family BAE_17350 PF00158 Sigma-54 interaction domain BAE_17355 PF00535 Glycosyl transferase family 2 BAE_17370 PF12996 DUF based on E. rectale Gene description (DUF3880) BAE_17380 PF02719 Polysaccharide biosynthesis protein BAE_17385 PF01641 SelR domain BAE_17390 PF01625 Peptide methionine sulfoxide reductase BAE_17395 PF01047 MarR family BAE_17415 PF17431 Uncharacterized YmpT-like BAE_17420 PF09911 Uncharacterized protein conserved in bacteria (DUF2140) BAE_17425 PF13472 GDSL-like Lipase/Acylhydrolase family BAE_17430 PF02630 SCO1/SenC BAE_17435 PF02645 Uncharacterised protein, DegV family COG1307 BAE_17440 PF10751 Protein of unknown function (DUF2535) BAE_17445 PF00585 C-terminal regulatory domain of Threonine dehydratase BAE_17445 PF00291 Pyridoxal-phosphate dependent enzyme BAE_17450 PF00158 Sigma-54 interaction domain BAE_17450 PF08461 Ribonuclease R winged-helix domain BAE_17455 PF03006 Haemolysin-III related BAE_17465 PF00186 Dihydrofolate reductase BAE_17470 PF00303 Thymidylate synthase BAE_17475 PF04608 Phosphatidylglycerophosphatase A BAE_17480 PF14005 YpjP-like protein BAE_17485 PF04445 Putative SAM-dependent methyltransferase BAE_17490 PF06491 Disulphide isomerase BAE_17495 PF00920 Dehydratase family BAE_17500 PF13769 Virulence factor BAE_17500 PF08712 Scaffold protein Nfu/NifU N terminal BAE_17505 PF01966 HD domain BAE_17510 PF00255 Glutathione peroxidase BAE_17515 PF01268 Formate--tetrahydrofolate ligase BAE_17520 PF04204 Homoserine O-succinyltransferase BAE_17525 PF00534 Glycosyl transferases group 1 BAE_17525 PF06925 Monogalactosyldiacylglycerol (MGDG) synthase BAE_17535 PF00313 'Cold-shock' DNA-binding domain BAE_17545 PF10782 Zinc-finger BAE_17550 PF13456 Reverse transcriptase-like BAE_17555 PF02592 Putative vitamin uptake transporter BAE_17560 PF13456 Reverse transcriptase-like BAE_17570 PF01367 5'-3' exonuclease, C-terminal SAM fold BAE_17570 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain BAE_17580 PF00350 Dynamin family BAE_17590 PF04140 Isoprenylcysteine carboxyl methyltransferase (ICMT) family BAE_17595 PF02797 Chalcone and stilbene synthases, C-terminal domain BAE_17595 PF00195 Chalcone and stilbene synthases, N-terminal domain BAE_17605 PF01522 Polysaccharide deacetylase BAE_17610 PF00860 Permease family BAE_17625 PF02074 Carboxypeptidase Taq (M32) metallopeptidase BAE_17630 PF13307 Helicase C-terminal domain BAE_17640 PF01170 Putative RNA methylase family UPF0020 BAE_17640 PF02926 THUMP domain BAE_17650 PF05103 DivIVA protein BAE_17655 PF06908 YspA SLOG family BAE_17660 PF11122 Inner spore coat protein D BAE_17665 PF13482 RNase_H superfamily BAE_17670 PF09369 Domain of unknown function (DUF1998) BAE_17670 PF00271 Helicase conserved C-terminal domain BAE_17670 PF00270 DEAD/DEAH box helicase BAE_17675 PF00724 NADH:flavin oxidoreductase / NADH oxidase family BAE_17680 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 BAE_17690 PF14179 YppG-like protein BAE_17710 PF10720 Protein of unknown function (DUF2515) BAE_17715 PF03838 Recombination protein U BAE_17720 PF00912 Transglycosylase BAE_17720 PF00905 Penicillin binding protein transpeptidase domain BAE_17730 PF00633 Helix-hairpin-helix motif BAE_17730 PF10576 Iron-sulfur binding domain of endonuclease III BAE_17730 PF00730 HhH-GPD superfamily base excision DNA repair protein BAE_17735 PF07261 Replication initiation and membrane attachment BAE_17740 PF01336 OB-fold nucleic acid binding domain BAE_17740 PF00152 tRNA synthetases class II (D, K and N) BAE_17745 PF17881 Domain of unknown function (DUF5590) BAE_17745 PF03413 Peptidase propeptide and YPEB domain BAE_17750 PF14084 Protein of unknown function (DUF4264) BAE_17755 PF04851 Type III restriction enzyme, res subunit BAE_17755 PF00929 Exonuclease BAE_17755 PF13307 Helicase C-terminal domain BAE_17760 PF02261 Aspartate decarboxylase BAE_17765 PF02569 Pantoate-beta-alanine ligase BAE_17770 PF02548 Ketopantoate hydroxymethyltransferase BAE_17775 PF03099 Biotin/lipoate A/B protein ligase family BAE_17775 PF08279 HTH domain BAE_17775 PF02237 Biotin protein ligase C terminal domain BAE_17780 PF13735 tRNA nucleotidyltransferase domain 2 putative BAE_17780 PF01743 Poly A polymerase head domain BAE_17780 PF12627 Probable RNA and SrmB- binding site of polymerase A BAE_17785 PF00534 Glycosyl transferases group 1 BAE_17785 PF13439 Glycosyltransferase Family 4 BAE_17790 PF02585 GlcNAc-PI de-N-acetylase BAE_17795 PF02142 MGS-like domain BAE_17800 PF05173 Dihydrodipicolinate reductase, C-terminus BAE_17800 PF01113 Dihydrodipicolinate reductase, N-terminus BAE_17805 PF03819 MazG nucleotide pyrophosphohydrolase domain BAE_17810 PF10035 Uncharacterized protein conserved in bacteria (DUF2179) BAE_17810 PF02588 Uncharacterised 5xTM membrane BCR, YitT family COG1284 BAE_17815 PF09577 Sporulation protein YpjB (SpoYpjB) BAE_17820 PF07187 Protein of unknown function (DUF1405) BAE_17825 PF00032 Cytochrome b(C-terminal)/b6/petD BAE_17825 PF13442 Cytochrome C oxidase, cbb3-type, subunit III BAE_17830 PF00033 Cytochrome b/b6/petB BAE_17835 PF00355 Rieske [2Fe-2S] domain BAE_17840 PF10673 Protein of unknown function (DUF2487) BAE_17845 PF08858 IDEAL domain BAE_17845 PF08864 UPF0302 domain BAE_17855 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) BAE_17860 PF02153 Prephenate dehydrogenase BAE_17860 PF01842 ACT domain BAE_17865 PF00155 Aminotransferase class I and II BAE_17870 PF00290 Tryptophan synthase alpha chain BAE_17875 PF00291 Pyridoxal-phosphate dependent enzyme BAE_17880 PF00697 N-(5'phosphoribosyl)anthranilate (PRA) isomerase BAE_17885 PF00218 Indole-3-glycerol phosphate synthase BAE_17890 PF02885 Glycosyl transferase family, helical bundle domain BAE_17890 PF00591 Glycosyl transferase family, a/b domain BAE_17895 PF00425 chorismate binding enzyme BAE_17895 PF04715 Anthranilate synthase component I, N terminal region BAE_17900 PF07736 Chorismate mutase type I BAE_17905 PF01761 3-dehydroquinate synthase BAE_17910 PF01264 Chorismate synthase BAE_17915 PF01739 CheR methyltransferase, SAM binding domain BAE_17915 PF03705 CheR methyltransferase, all-alpha domain BAE_17920 PF00334 Nucleoside diphosphate kinase BAE_17925 PF00348 Polyprenyl synthetase BAE_17930 PF01209 ubiE/COQ5 methyltransferase family BAE_17935 PF07307 Heptaprenyl diphosphate synthase (HEPPP synthase) subunit 1 BAE_17940 PF02081 Tryptophan RNA-binding attenuator protein BAE_17945 PF01227 GTP cyclohydrolase I BAE_17950 PF00216 Bacterial DNA-binding protein BAE_17960 PF09547 Stage IV sporulation protein A (spore_IV_A) BAE_17970 PF10966 Protein of unknown function (DUF2768) BAE_17975 PF07479 NAD-dependent glycerol-3-phosphate dehydrogenase C-terminus BAE_17975 PF01210 NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus BAE_17980 PF01926 50S ribosome-binding GTPase BAE_17980 PF14714 KH-domain-like of EngA bacterial GTPase enzymes, C-terminal BAE_17990 PF14045 YIEGIA protein BAE_18000 PF14140 YpzI-like protein BAE_18005 PF01070 FMN-dependent dehydrogenase BAE_18010 PF00575 S1 RNA binding domain BAE_18015 PF02224 Cytidylate kinase BAE_18020 PF17313 Family of unknown function (DUF5359) BAE_18025 PF12945 Flagellar protein YcgR BAE_18025 PF07238 PilZ domain BAE_18030 PF14620 YpeB sporulation BAE_18030 PF03413 Peptidase propeptide and YPEB domain BAE_18035 PF07486 Cell Wall Hydrolase BAE_18035 PF01471 Putative peptidoglycan binding domain BAE_18040 PF13367 PrsW family intramembrane metalloprotease BAE_18050 PF00208 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase BAE_18050 PF02812 Glu/Leu/Phe/Val dehydrogenase, dimerisation domain BAE_18055 PF05389 Negative regulator of genetic competence (MecA) BAE_18060 PF00149 Calcineurin-like phosphoesterase BAE_18065 PF10864 Protein of unknown function (DUF2663) BAE_18070 PF01476 LysM domain BAE_18075 PF02517 CPBP intramembrane metalloprotease BAE_18080 PF00271 Helicase conserved C-terminal domain BAE_18080 PF00270 DEAD/DEAH box helicase BAE_18085 PF14493 Helix-turn-helix domain BAE_18095 PF12822 ECF transporter, substrate-specific component BAE_18100 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain BAE_18100 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain BAE_18100 PF01842 ACT domain BAE_18105 PF01476 LysM domain BAE_18105 PF01551 Peptidase family M23 BAE_18120 PF04542 Sigma-70 region 2 BAE_18120 PF08281 Sigma-70, region 4 BAE_18125 PF00512 His Kinase A (phospho-acceptor) domain BAE_18125 PF18698 Histidine kinase sensor domain BAE_18125 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BAE_18125 PF00672 HAMP domain BAE_18125 PF00989 PAS fold BAE_18130 PF00486 Transcriptional regulatory protein, C terminal BAE_18130 PF00072 Response regulator receiver domain BAE_18135 PF01578 Cytochrome C assembly protein BAE_18140 PF05140 ResB-like family BAE_18145 PF00578 AhpC/TSA family BAE_18150 PF00849 RNA pseudouridylate synthase BAE_18150 PF01479 S4 domain BAE_18155 PF07670 Nucleoside recognition BAE_18160 PF07670 Nucleoside recognition BAE_18165 PF00768 D-alanyl-D-alanine carboxypeptidase BAE_18165 PF07943 Penicillin-binding protein 5, C-terminal domain BAE_18170 PF13047 Protein of unknown function (DUF3907) BAE_18175 PF04079 Segregation and condensation complex subunit ScpB BAE_18180 PF02616 Segregation and condensation protein ScpA BAE_18190 PF03745 Domain of unknown function (DUF309) BAE_18200 PF00583 Acetyltransferase (GNAT) family BAE_18205 PF00885 6,7-dimethyl-8-ribityllumazine synthase BAE_18210 PF00925 GTP cyclohydrolase II BAE_18210 PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase BAE_18215 PF00677 Lumazine binding domain BAE_18240 PF07690 Major Facilitator Superfamily BAE_18245 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD BAE_18250 PF06207 Protein of unknown function (DUF1002) BAE_18255 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain BAE_18255 PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain BAE_18260 PF03323 Bacillus/Clostridium GerA spore germination protein BAE_18265 PF14097 Stage V sporulation protein AE1 BAE_18270 PF03862 SpoVAC/SpoVAEB sporulation membrane protein BAE_18275 PF07451 Stage V sporulation protein AD (SpoVAD) BAE_18280 PF03862 SpoVAC/SpoVAEB sporulation membrane protein BAE_18285 PF13782 Stage V sporulation protein AB BAE_18290 PF12164 Stage V sporulation protein AA BAE_18295 PF04539 Sigma-70 region 3 BAE_18295 PF04542 Sigma-70 region 2 BAE_18295 PF04545 Sigma-70, region 4 BAE_18300 PF13581 Histidine kinase-like ATPase domain BAE_18305 PF01740 STAS domain BAE_18310 PF07943 Penicillin-binding protein 5, C-terminal domain BAE_18310 PF00768 D-alanyl-D-alanine carboxypeptidase BAE_18315 PF01048 Phosphorylase superfamily BAE_18320 PF01676 Metalloenzyme superfamily BAE_18325 PF02899 Phage integrase, N-terminal SAM-like domain BAE_18325 PF00589 Phage integrase family BAE_18330 PF14004 Protein of unknown function (DUF4227) BAE_18335 PF01475 Ferric uptake regulator family BAE_18340 PF01944 Stage II sporulation protein M BAE_18345 PF05922 Peptidase inhibitor I9 BAE_18345 PF00082 Subtilase family BAE_18355 PF13673 Acetyltransferase (GNAT) domain BAE_18365 PF00293 NUDIX domain BAE_18370 PF00248 Aldo/keto reductase family BAE_18380 PF12146 Serine aminopeptidase, S33 BAE_18385 PF18801 response regulator aspartate phosphatase H, N terminal BAE_18390 PF10827 Protein of unknown function (DUF2552) BAE_18395 PF01521 Iron-sulphur cluster biosynthesis BAE_18400 PF03330 Lytic transglycolase BAE_18405 PF13673 Acetyltransferase (GNAT) domain BAE_18405 PF04229 GrpB protein BAE_18410 PF00583 Acetyltransferase (GNAT) family BAE_18415 PF10787 Uncharacterised protein from bacillus cereus group BAE_18420 PF11799 impB/mucB/samB family C-terminal domain BAE_18420 PF00817 impB/mucB/samB family BAE_18425 PF08863 YolD-like protein BAE_18430 PF07690 Major Facilitator Superfamily BAE_18435 PF00485 Phosphoribulokinase / Uridine kinase family BAE_18440 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain BAE_18440 PF07992 Pyridine nucleotide-disulphide oxidoreductase BAE_18450 PF00106 short chain dehydrogenase BAE_18455 PF00753 Metallo-beta-lactamase superfamily BAE_18460 PF14748 Pyrroline-5-carboxylate reductase dimerisation BAE_18460 PF03807 NADP oxidoreductase coenzyme F420-dependent BAE_18470 PF01546 Peptidase family M20/M25/M40 BAE_18475 PF00724 NADH:flavin oxidoreductase / NADH oxidase family BAE_18480 PF12146 Serine aminopeptidase, S33 BAE_18485 PF12897 Alanine-glyoxylate amino-transferase BAE_18490 PF12706 Beta-lactamase superfamily domain BAE_18495 PF00479 Glucose-6-phosphate dehydrogenase, NAD binding domain BAE_18495 PF02781 Glucose-6-phosphate dehydrogenase, C-terminal domain BAE_18500 PF07702 UTRA domain BAE_18500 PF00392 Bacterial regulatory proteins, gntR family BAE_18505 PF00232 Glycosyl hydrolase family 1 BAE_18510 PF02378 Phosphotransferase system, EIIC BAE_18515 PF02255 PTS system, Lactose/Cellobiose specific IIA subunit BAE_18520 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit BAE_18535 PF06800 Sugar transport protein BAE_18540 PF00393 6-phosphogluconate dehydrogenase, C-terminal domain BAE_18540 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase BAE_18545 PF11798 IMS family HHH motif BAE_18545 PF11799 impB/mucB/samB family C-terminal domain BAE_18545 PF00817 impB/mucB/samB family BAE_18555 PF02096 60Kd inner membrane protein BAE_18560 PF01584 CheW-like domain BAE_18565 PF07687 Peptidase dimerisation domain BAE_18565 PF01546 Peptidase family M20/M25/M40 BAE_18570 PF01039 Carboxyl transferase domain BAE_18580 PF03734 L,D-transpeptidase catalytic domain BAE_18585 PF11728 Putative aromatic acid exporter C-terminal domain BAE_18585 PF06081 Aromatic acid exporter family member 1 BAE_18590 PF00005 ABC transporter BAE_18595 PF00528 Binding-protein-dependent transport system inner membrane component BAE_18600 PF00497 Bacterial extracellular solute-binding proteins, family 3 BAE_18605 PF06491 Disulphide isomerase BAE_18610 PF00781 Diacylglycerol kinase catalytic domain BAE_18620 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) BAE_18620 PF02817 e3 binding domain BAE_18620 PF00364 Biotin-requiring enzyme BAE_18625 PF02780 Transketolase, C-terminal domain BAE_18625 PF02779 Transketolase, pyrimidine binding domain BAE_18630 PF00676 Dehydrogenase E1 component BAE_18635 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain BAE_18635 PF07992 Pyridine nucleotide-disulphide oxidoreductase BAE_18640 PF00871 Acetokinase family BAE_18645 PF02812 Glu/Leu/Phe/Val dehydrogenase, dimerisation domain BAE_18645 PF00208 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase BAE_18650 PF01515 Phosphate acetyl/butaryl transferase BAE_18655 PF00989 PAS fold BAE_18655 PF02954 Bacterial regulatory protein, Fis family BAE_18655 PF00158 Sigma-54 interaction domain BAE_18660 PF11118 Protein of unknown function (DUF2627) BAE_18665 PF03009 Glycerophosphoryl diester phosphodiesterase family BAE_18670 PF18801 response regulator aspartate phosphatase H, N terminal BAE_18675 PF00072 Response regulator receiver domain BAE_18675 PF08769 Sporulation initiation factor Spo0A C terminal BAE_18680 PF17820 PDZ domain BAE_18680 PF05580 SpoIVB peptidase S55 BAE_18685 PF13476 AAA domain BAE_18690 PF02863 Arginine repressor, C-terminal domain BAE_18690 PF01316 Arginine repressor, DNA binding domain BAE_18695 PF01479 S4 domain BAE_18695 PF01728 FtsJ-like methyltransferase BAE_18700 PF13292 1-deoxy-D-xylulose-5-phosphate synthase BAE_18700 PF02780 Transketolase, C-terminal domain BAE_18700 PF02779 Transketolase, pyrimidine binding domain BAE_18705 PF00348 Polyprenyl synthetase BAE_18710 PF02609 Exonuclease VII small subunit BAE_18715 PF13742 OB-fold nucleic acid binding domain BAE_18715 PF02601 Exonuclease VII, large subunit BAE_18720 PF00763 Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain BAE_18720 PF02882 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain BAE_18725 PF01029 NusB family BAE_18730 PF03780 Asp23 family, cell envelope-related function BAE_18735 PF00289 Biotin carboxylase, N-terminal domain BAE_18735 PF02785 Biotin carboxylase C-terminal domain BAE_18735 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain BAE_18740 PF00364 Biotin-requiring enzyme BAE_18745 PF12685 SpoIIIAH-like protein BAE_18755 PF09581 Stage III sporulation protein AF (Spore_III_AF) BAE_18760 PF09546 Stage III sporulation protein AE (spore_III_AE) BAE_18765 PF06686 Stage III sporulation protein AC/AD protein family BAE_18770 PF06686 Stage III sporulation protein AC/AD protein family BAE_18775 PF09548 Stage III sporulation protein AB (spore_III_AB) BAE_18785 PF10942 Protein of unknown function (DUF2619) BAE_18790 PF08207 Elongation factor P (EF-P) KOW-like domain BAE_18790 PF09285 Elongation factor P, C-terminal BAE_18790 PF01132 Elongation factor P (EF-P) OB domain BAE_18795 PF01321 Creatinase/Prolidase N-terminal domain BAE_18795 PF00557 Metallopeptidase family M24 BAE_18800 PF01220 Dehydroquinase class II BAE_18805 PF11085 Conserved membrane protein YqhR BAE_18810 PF07136 Protein of unknown function (DUF1385) BAE_18820 PF01734 Patatin-like phospholipase BAE_18825 PF02742 Iron dependent repressor, metal binding and dimerisation domain BAE_18825 PF01325 Iron dependent repressor, N-terminal DNA binding domain BAE_18830 PF03099 Biotin/lipoate A/B protein ligase family BAE_18835 PF00581 Rhodanese-like domain BAE_18840 PF02347 Glycine cleavage system P-protein BAE_18845 PF02347 Glycine cleavage system P-protein BAE_18850 PF08669 Glycine cleavage T-protein C-terminal barrel domain BAE_18850 PF01571 Aminomethyltransferase folate-binding domain BAE_18855 PF00271 Helicase conserved C-terminal domain BAE_18855 PF00176 SNF2 family N-terminal domain BAE_18860 PF11079 Bacterial protein YqhG of unknown function BAE_18870 PF08671 Anti-repressor SinI BAE_18870 PF01381 Helix-turn-helix BAE_18875 PF12389 Camelysin metallo-endopeptidase BAE_18890 PF13028 Protein of unknown function (DUF3889) BAE_18895 PF14038 YqzE-like protein BAE_18915 PF07963 Prokaryotic N-terminal methylation motif BAE_18920 PF07963 Prokaryotic N-terminal methylation motif BAE_18925 PF00482 Type II secretion system (T2SS), protein F BAE_18930 PF00437 Type II/IV secretion system protein BAE_18935 PF14361 RsbT co-antagonist protein rsbRD N-terminal domain BAE_18935 PF01740 STAS domain BAE_18945 PF03960 ArsC family BAE_18950 PF11117 Protein of unknown function (DUF2626) BAE_18955 PF00753 Metallo-beta-lactamase superfamily BAE_18960 PF10958 Protein of unknown function (DUF2759) BAE_18965 PF01910 Thiamine-binding protein BAE_18970 PF07690 Major Facilitator Superfamily BAE_18980 PF00246 Zinc carboxypeptidase BAE_18985 PF00884 Sulfatase BAE_18990 PF00480 ROK family BAE_18995 PF06014 Bacterial protein of unknown function (DUF910) BAE_19000 PF01694 Rhomboid family BAE_19010 PF01812 5-formyltetrahydrofolate cyclo-ligase family BAE_19015 PF00471 Ribosomal protein L33 BAE_19035 PF00005 ABC transporter BAE_19040 PF00005 ABC transporter BAE_19045 PF00528 Binding-protein-dependent transport system inner membrane component BAE_19050 PF00528 Binding-protein-dependent transport system inner membrane component BAE_19055 PF12849 PBP superfamily domain BAE_19065 PF07690 Major Facilitator Superfamily BAE_19070 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain BAE_19070 PF02777 Iron/manganese superoxide dismutases, C-terminal domain BAE_19075 PF04306 Protein of unknown function (DUF456) BAE_19080 PF06691 Protein of unknown function (DUF1189) BAE_19085 PF13302 Acetyltransferase (GNAT) domain BAE_19095 PF04551 GcpE protein BAE_19110 PF00480 ROK family BAE_19115 PF01475 Ferric uptake regulator family BAE_19120 PF00950 ABC 3 transport family BAE_19125 PF00005 ABC transporter BAE_19130 PF02588 Uncharacterised 5xTM membrane BCR, YitT family COG1284 BAE_19130 PF10035 Uncharacterized protein conserved in bacteria (DUF2179) BAE_19135 PF11116 Protein of unknown function (DUF2624) BAE_19140 PF01261 Xylose isomerase-like TIM barrel BAE_19145 PF00270 DEAD/DEAH box helicase BAE_19145 PF00271 Helicase conserved C-terminal domain BAE_19155 PF02401 LytB protein BAE_19160 PF01784 NIF3 (NGG1p interacting factor 3) BAE_19165 PF04816 tRNA (adenine(22)-N(1))-methyltransferase BAE_19170 PF13442 Cytochrome C oxidase, cbb3-type, subunit III BAE_19175 PF04545 Sigma-70, region 4 BAE_19175 PF04539 Sigma-70 region 3 BAE_19175 PF04542 Sigma-70 region 2 BAE_19175 PF00140 Sigma-70 factor, region 1.2 BAE_19175 PF03979 Sigma-70 factor, region 1.1 BAE_19180 PF01807 CHC2 zinc finger BAE_19180 PF08275 DNA primase catalytic core, N-terminal domain BAE_19180 PF10410 DnaB-helicase binding domain of primase BAE_19185 PF02639 Uncharacterized BCR, YaiI/YqxD family COG1671 BAE_19190 PF03618 Kinase/pyrophosphorylase BAE_19195 PF08279 HTH domain BAE_19195 PF00571 CBS domain BAE_19200 PF02092 Glycyl-tRNA synthetase beta subunit BAE_19205 PF02091 Glycyl-tRNA synthetase alpha subunit BAE_19210 PF11967 Recombination protein O N terminal BAE_19210 PF02565 Recombination protein O C terminal BAE_19215 PF14006 YqzL-like protein BAE_19220 PF01926 50S ribosome-binding GTPase BAE_19220 PF07650 KH domain BAE_19225 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region BAE_19230 PF01219 Prokaryotic diacylglycerol kinase BAE_19235 PF02130 Uncharacterized protein family UPF0054 BAE_19240 PF01966 HD domain BAE_19240 PF07697 7TM-HD extracellular BAE_19240 PF07698 7TM receptor with intracellular HD hydrolase BAE_19245 PF02562 PhoH-like protein BAE_19250 PF06898 Putative stage IV sporulation protein YqfD BAE_19255 PF07873 YabP family BAE_19265 PF12127 SigmaW regulon antibacterial BAE_19270 PF01972 Serine dehydrogenase proteinase BAE_19270 PF01957 NfeD-like C-terminal, partner-binding BAE_19275 PF09424 Yqey-like protein BAE_19280 PF01165 Ribosomal protein S21 BAE_19285 PF02690 Na+/Pi-cotransporter BAE_19290 PF00919 Uncharacterized protein family UPF0004 BAE_19290 PF04055 Radical SAM superfamily BAE_19290 PF01938 TRAM domain BAE_19295 PF04452 RNA methyltransferase BAE_19305 PF00684 DnaJ central domain BAE_19305 PF00226 DnaJ domain BAE_19305 PF01556 DnaJ C terminal domain BAE_19310 PF00012 Hsp70 protein BAE_19315 PF01025 GrpE BAE_19320 PF01628 HrcA protein C terminal domain BAE_19325 PF04055 Radical SAM superfamily BAE_19325 PF06969 HemN C-terminal domain BAE_19330 PF06421 GTP-binding protein LepA C-terminus BAE_19330 PF00009 Elongation factor Tu GTP binding domain BAE_19330 PF00679 Elongation factor G C-terminus BAE_19330 PF03144 Elongation factor Tu domain 2 BAE_19335 PF12438 Protein of unknown function (DUF3679) BAE_19340 PF07454 Stage II sporulation protein P (SpoIIP) BAE_19345 PF03418 Germination protease BAE_19350 PF01649 Ribosomal protein S20 BAE_19355 PF06144 DNA polymerase III, delta subunit BAE_19360 PF14141 YqzM-like protein BAE_19365 PF03772 Competence protein BAE_19365 PF00753 Metallo-beta-lactamase superfamily BAE_19365 PF13567 Domain of unknown function (DUF4131) BAE_19370 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region BAE_19375 PF10531 SLBB domain BAE_19380 PF03807 NADP oxidoreductase coenzyme F420-dependent BAE_19380 PF14748 Pyrroline-5-carboxylate reductase dimerisation BAE_19385 PF13649 Methyltransferase domain BAE_19395 PF01966 HD domain BAE_19400 PF01467 Cytidylyltransferase-like BAE_19405 PF01985 CRS1 / YhbY (CRM) domain BAE_19410 PF01488 Shikimate / quinate 5-dehydrogenase BAE_19410 PF08501 Shikimate dehydrogenase substrate binding domain BAE_19410 PF18317 Shikimate 5'-dehydrogenase C-terminal domain BAE_19415 PF01926 50S ribosome-binding GTPase BAE_19425 PF08970 Sporulation inhibitor A BAE_19430 PF00657 GDSL-like Lipase/Acylhydrolase BAE_19435 PF01522 Polysaccharide deacetylase BAE_19440 PF18801 response regulator aspartate phosphatase H, N terminal BAE_19440 PF13176 Tetratricopeptide repeat BAE_19445 PF04545 Sigma-70, region 4 BAE_19445 PF04542 Sigma-70 region 2 BAE_19450 PF07508 Recombinase BAE_19450 PF13408 Recombinase zinc beta ribbon domain BAE_19450 PF00239 Resolvase, N terminal domain BAE_19475 PF01510 N-acetylmuramoyl-L-alanine amidase BAE_19475 PF01471 Putative peptidoglycan binding domain BAE_19480 PF04688 SPP1 phage holin BAE_19485 PF10960 BhlA holin family BAE_19510 PF10076 Uncharacterised protein conserved in bacteria (DUF2313) BAE_19515 PF04865 Baseplate J-like protein BAE_19520 PF10934 Protein of unknown function (DUF2634) BAE_19525 PF10844 Protein of unknown function (DUF2577) BAE_19535 PF01476 LysM domain BAE_19540 PF01464 Transglycosylase SLT domain BAE_19540 PF01464 Transglycosylase SLT domain BAE_19545 PF08890 Phage XkdN-like tail assembly chaperone protein, TAC BAE_19555 PF09393 Phage tail tube protein BAE_19560 PF17481 Phage tail sheath protein beta-sandwich domain BAE_19560 PF04984 Phage tail sheath protein subtilisin-like domain BAE_19560 PF17482 Phage tail sheath C-terminal domain BAE_19575 PF04883 Bacteriophage HK97-gp10, putative tail-component BAE_19580 PF12206 Domain of unknown function (DUF3599) BAE_19585 PF11436 Protein of unknown function (DUF3199) BAE_19590 PF14553 YqbF, hypothetical protein domain BAE_19595 PF05065 Phage capsid family BAE_19600 PF14550 Putative phage serine protease XkdF BAE_19610 PF04233 Phage Mu protein F like protein BAE_19615 PF04860 Phage portal protein BAE_19620 PF17288 Terminase RNAseH like domain BAE_19620 PF04466 Phage terminase large subunit BAE_19660 PF04740 LXG domain of WXG superfamily BAE_19660 PF14449 Pre-toxin TG BAE_19660 PF14410 HNH/ENDO VII superfamily nuclease with conserved GHE residues BAE_19675 PF16872 Putative phage abortive infection protein BAE_19700 PF05866 Endodeoxyribonuclease RusA BAE_19710 PF00772 DnaB-like helicase N terminal domain BAE_19710 PF03796 DnaB-like helicase C terminal domain BAE_19740 PF09466 Hypothetical protein Yqai BAE_19765 PF01381 Helix-turn-helix BAE_19770 PF06114 IrrE N-terminal-like domain BAE_19810 PF01522 Polysaccharide deacetylase BAE_19810 PF13739 Deacetylase PdaC BAE_19810 PF11738 Protein of unknown function (DUF3298) BAE_19845 PF00005 ABC transporter BAE_19865 PF00083 Sugar (and other) transporter BAE_19870 PF02610 L-arabinose isomerase BAE_19870 PF11762 L-arabinose isomerase C-terminal domain BAE_19875 PF00596 Class II Aldolase and Adducin N-terminal domain BAE_19885 PF00392 Bacterial regulatory proteins, gntR family BAE_19895 PF01047 MarR family