locus-tag class description L2D31_00005 PF00308 Bacterial dnaA protein L2D31_00005 PF08299 Bacterial dnaA protein helix-turn-helix L2D31_00005 PF11638 DnaA N-terminal domain L2D31_00010 PF00712 DNA polymerase III beta subunit, N-terminal domain L2D31_00010 PF02767 DNA polymerase III beta subunit, central domain L2D31_00010 PF02768 DNA polymerase III beta subunit, C-terminal domain L2D31_00020 PF02463 RecF/RecN/SMC N terminal domain L2D31_00025 PF04025 Domain of unknown function (DUF370) L2D31_00030 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase L2D31_00030 PF01751 Toprim domain L2D31_00030 PF00204 DNA gyrase B L2D31_00030 PF00986 DNA gyrase B subunit, carboxyl terminus L2D31_00035 PF03989 DNA gyrase C-terminal domain, beta-propeller L2D31_00035 PF00521 DNA gyrase/topoisomerase IV, subunit A L2D31_00065 PF14175 YaaC-like Protein L2D31_00070 PF00571 CBS domain L2D31_00070 PF00478 IMP dehydrogenase / GMP reductase domain L2D31_00075 PF07943 Penicillin-binding protein 5, C-terminal domain L2D31_00075 PF00768 D-alanyl-D-alanine carboxypeptidase L2D31_00080 PF00155 Aminotransferase class I and II L2D31_00080 PF00392 Bacterial regulatory proteins, gntR family L2D31_00085 PF01680 SOR/SNZ family L2D31_00090 PF01174 SNO glutamine amidotransferase family L2D31_00095 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) L2D31_00095 PF02403 Seryl-tRNA synthetase N-terminal domain L2D31_00110 PF01712 Deoxynucleoside kinase L2D31_00115 PF01712 Deoxynucleoside kinase L2D31_00120 PF00704 Glycosyl hydrolases family 18 L2D31_00120 PF01476 LysM domain L2D31_00125 PF00857 Isochorismatase family L2D31_00130 PF14437 MafB19-like deaminase L2D31_00140 PF12169 DNA polymerase III subunits gamma and tau domain III L2D31_00145 PF02575 YbaB/EbfC DNA-binding family L2D31_00150 PF02132 RecR protein L2D31_00150 PF13662 Toprim domain L2D31_00155 PF10704 Protein of unknown function (DUF2508) L2D31_00160 PF07441 SigmaK-factor processing regulatory protein BofA L2D31_00190 PF10764 Inhibitor of sigma-G Gin L2D31_00195 PF10112 5-bromo-4-chloroindolyl phosphate hydrolysis protein L2D31_00200 PF05816 Toxic anion resistance protein (TelA) L2D31_00205 PF01276 Orn/Lys/Arg decarboxylase, major domain L2D31_00205 PF03711 Orn/Lys/Arg decarboxylase, C-terminal domain L2D31_00210 PF02223 Thymidylate kinase L2D31_00215 PF06153 Cyclic-di-AMP receptor L2D31_00220 PF03885 Protein of unknown function (DUF327) L2D31_00225 PF09115 DNA polymerase III, delta subunit, C terminal L2D31_00230 PF04468 PSP1 C-terminal conserved region L2D31_00235 PF06156 Initiation control protein YabA L2D31_00240 PF05175 Methyltransferase small domain L2D31_00245 PF01541 GIY-YIG catalytic domain L2D31_00250 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases L2D31_00255 PF18277 AbrB C-terminal domain L2D31_00255 PF04014 Antidote-toxin recognition MazE, bacterial antitoxin L2D31_00260 PF08264 Anticodon-binding domain of tRNA L2D31_00260 PF09334 tRNA synthetases class I (M) L2D31_00260 PF01588 Putative tRNA binding domain L2D31_00265 PF01026 TatD related DNase L2D31_00270 PF06725 3D domain L2D31_00270 PF03990 G5-linked-Ubiquitin-like domain L2D31_00270 PF07501 G5 domain L2D31_00275 PF13331 Domain of unknown function (DUF4093) L2D31_00275 PF13662 Toprim domain L2D31_00280 PF00398 Ribosomal RNA adenine dimethylase L2D31_00285 PF05582 YabG peptidase U57 L2D31_00290 PF06257 Biofilm formation stimulator VEG L2D31_00295 PF00269 Small, acid-soluble spore proteins, alpha/beta type L2D31_00300 PF08544 GHMP kinases C terminal L2D31_00300 PF00288 GHMP kinases N terminal domain L2D31_00305 PF00156 Phosphoribosyl transferase domain L2D31_00305 PF09182 Bacterial purine repressor, N-terminal L2D31_00310 PF01042 Endoribonuclease L-PSP L2D31_00315 PF04026 SpoVG L2D31_00320 PF00132 Bacterial transferase hexapeptide (six repeats) L2D31_00320 PF00483 Nucleotidyl transferase L2D31_00325 PF13793 N-terminal domain of ribose phosphate pyrophosphokinase L2D31_00325 PF14572 Phosphoribosyl synthetase-associated domain L2D31_00330 PF01386 Ribosomal L25p family L2D31_00330 PF14693 Ribosomal protein TL5, C-terminal domain L2D31_00335 PF01195 Peptidyl-tRNA hydrolase L2D31_00340 PF10955 Protein of unknown function (DUF2757) L2D31_00345 PF02559 CarD-like/TRCF domain L2D31_00345 PF00270 DEAD/DEAH box helicase L2D31_00345 PF00271 Helicase conserved C-terminal domain L2D31_00345 PF03461 TRCF domain L2D31_00345 PF17757 UvrB interaction domain L2D31_00350 PF04014 Antidote-toxin recognition MazE, bacterial antitoxin L2D31_00350 PF15714 Stage V sporulation protein T C-terminal, transcription factor L2D31_00355 PF14667 Polysaccharide biosynthesis C-terminal domain L2D31_00355 PF01943 Polysaccharide biosynthesis protein L2D31_00360 PF03819 MazG nucleotide pyrophosphohydrolase domain L2D31_00360 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases L2D31_00365 PF01479 S4 domain L2D31_00370 PF07873 YabP family L2D31_00375 PF09578 Spore cortex protein YabQ (Spore_YabQ) L2D31_00380 PF04977 Septum formation initiator L2D31_00385 PF00575 S1 RNA binding domain L2D31_00400 PF07228 Stage II sporulation protein E (SpoIIE) L2D31_00405 PF00092 von Willebrand factor type A domain L2D31_00410 PF00069 Protein kinase domain L2D31_00415 PF11734 TilS substrate C-terminal domain L2D31_00415 PF01171 PP-loop family L2D31_00415 PF09179 TilS substrate binding domain L2D31_00420 PF00156 Phosphoribosyl transferase domain L2D31_00425 PF00004 ATPase family associated with various cellular activities (AAA) L2D31_00425 PF17862 AAA+ lid domain L2D31_00425 PF06480 FtsH Extracellular L2D31_00425 PF01434 Peptidase family M41 L2D31_00430 PF03309 Type III pantothenate kinase L2D31_00435 PF01430 Hsp33 protein L2D31_00440 PF13145 PPIC-type PPIASE domain L2D31_00445 PF00291 Pyridoxal-phosphate dependent enzyme L2D31_00450 PF00425 chorismate binding enzyme L2D31_00450 PF04715 Anthranilate synthase component I, N terminal region L2D31_00455 PF00117 Glutamine amidotransferase class-I L2D31_00460 PF01063 Amino-transferase class IV L2D31_00465 PF00809 Pterin binding enzyme L2D31_00470 PF02152 Dihydroneopterin aldolase L2D31_00475 PF01288 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK) L2D31_00480 PF01381 Helix-turn-helix L2D31_00485 PF01207 Dihydrouridine synthase (Dus) L2D31_00490 PF01336 OB-fold nucleic acid binding domain L2D31_00490 PF00152 tRNA synthetases class II (D, K and N) L2D31_00570 PF05848 CtsR N-terminal HTH domain L2D31_00570 PF17727 CtsR C-terminal dimerization domain L2D31_00575 PF02151 UvrB/uvrC motif L2D31_00580 PF00217 ATP:guanido phosphotransferase, C-terminal catalytic domain L2D31_00585 PF00004 ATPase family associated with various cellular activities (AAA) L2D31_00585 PF07724 AAA domain (Cdc48 subfamily) L2D31_00585 PF17871 AAA lid domain L2D31_00585 PF02861 Clp amino terminal domain, pathogenicity island component L2D31_00585 PF10431 C-terminal, D2-small domain, of ClpB protein L2D31_00590 PF18073 Rubredoxin metal binding domain L2D31_00595 PF10635 DisA bacterial checkpoint controller linker region L2D31_00595 PF02457 DisA bacterial checkpoint controller nucleotide-binding L2D31_00605 PF01128 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase L2D31_00610 PF02542 YgbB family L2D31_00615 PF00749 tRNA synthetases class I (E and Q), catalytic domain L2D31_00620 PF00132 Bacterial transferase hexapeptide (six repeats) L2D31_00620 PF06426 Serine acetyltransferase, N-terminal L2D31_00625 PF09190 DALR domain L2D31_00625 PF01406 tRNA synthetases class I (C) catalytic domain L2D31_00630 PF00636 Ribonuclease III domain L2D31_00635 PF00588 SpoU rRNA Methylase family L2D31_00635 PF08032 RNA 2'-O ribose methyltransferase substrate binding L2D31_00640 PF05991 YacP-like NYN domain L2D31_00645 PF08281 Sigma-70, region 4 L2D31_00645 PF04542 Sigma-70 region 2 L2D31_00650 PF00471 Ribosomal protein L33 L2D31_00655 PF00584 SecE/Sec61-gamma subunits of protein translocation complex L2D31_00660 PF02357 Transcription termination factor nusG L2D31_00660 PF00467 KOW motif L2D31_00665 PF00298 Ribosomal protein L11, RNA binding domain L2D31_00665 PF03946 Ribosomal protein L11, N-terminal domain L2D31_00670 PF00687 Ribosomal protein L1p/L10e family L2D31_00675 PF00466 Ribosomal protein L10 L2D31_00680 PF00542 Ribosomal protein L7/L12 C-terminal domain L2D31_00680 PF16320 Ribosomal protein L7/L12 dimerisation domain L2D31_00685 PF05175 Methyltransferase small domain L2D31_00690 PF10385 RNA polymerase beta subunit external 1 domain L2D31_00690 PF04560 RNA polymerase Rpb2, domain 7 L2D31_00690 PF00562 RNA polymerase Rpb2, domain 6 L2D31_00690 PF04561 RNA polymerase Rpb2, domain 2 L2D31_00690 PF04563 RNA polymerase beta subunit L2D31_00690 PF04565 RNA polymerase Rpb2, domain 3 L2D31_00695 PF04998 RNA polymerase Rpb1, domain 5 L2D31_00695 PF04997 RNA polymerase Rpb1, domain 1 L2D31_00695 PF00623 RNA polymerase Rpb1, domain 2 L2D31_00695 PF04983 RNA polymerase Rpb1, domain 3 L2D31_00695 PF05000 RNA polymerase Rpb1, domain 4 L2D31_00700 PF01248 Ribosomal protein L7Ae/L30e/S12e/Gadd45 family L2D31_00705 PF00164 Ribosomal protein S12/S23 L2D31_00710 PF00177 Ribosomal protein S7p/S5e L2D31_00715 PF03144 Elongation factor Tu domain 2 L2D31_00715 PF00009 Elongation factor Tu GTP binding domain L2D31_00715 PF03764 Elongation factor G, domain IV L2D31_00715 PF00679 Elongation factor G C-terminus L2D31_00715 PF14492 Elongation Factor G, domain II L2D31_00720 PF00009 Elongation factor Tu GTP binding domain L2D31_00720 PF03144 Elongation factor Tu domain 2 L2D31_00720 PF03143 Elongation factor Tu C-terminal domain L2D31_00725 PF12146 Serine aminopeptidase, S33 L2D31_00730 PF00338 Ribosomal protein S10p/S20e L2D31_00735 PF00297 Ribosomal protein L3 L2D31_00740 PF00573 Ribosomal protein L4/L1 family L2D31_00745 PF00276 Ribosomal protein L23 L2D31_00750 PF00181 Ribosomal Proteins L2, RNA binding domain L2D31_00750 PF03947 Ribosomal Proteins L2, C-terminal domain L2D31_00755 PF00203 Ribosomal protein S19 L2D31_00760 PF00237 Ribosomal protein L22p/L17e L2D31_00765 PF07650 KH domain L2D31_00765 PF00189 Ribosomal protein S3, C-terminal domain L2D31_00770 PF00252 Ribosomal protein L16p/L10e L2D31_00775 PF00831 Ribosomal L29 protein L2D31_00780 PF00366 Ribosomal protein S17 L2D31_00785 PF00238 Ribosomal protein L14p/L23e L2D31_00790 PF17136 Ribosomal proteins 50S L24/mitochondrial 39S L24 L2D31_00790 PF00467 KOW motif L2D31_00795 PF00281 Ribosomal protein L5 L2D31_00795 PF00673 ribosomal L5P family C-terminus L2D31_00800 PF00253 Ribosomal protein S14p/S29e L2D31_00805 PF00410 Ribosomal protein S8 L2D31_00810 PF00347 Ribosomal protein L6 L2D31_00815 PF00861 Ribosomal L18 of archaea, bacteria, mitoch. and chloroplast L2D31_00820 PF00333 Ribosomal protein S5, N-terminal domain L2D31_00820 PF03719 Ribosomal protein S5, C-terminal domain L2D31_00825 PF00327 Ribosomal protein L30p/L7e L2D31_00830 PF00828 Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27A L2D31_00835 PF00344 SecY translocase L2D31_00840 PF05191 Adenylate kinase, active site lid L2D31_00845 PF00557 Metallopeptidase family M24 L2D31_00855 PF01176 Translation initiation factor 1A / IF-1 L2D31_00860 PF00444 Ribosomal protein L36 L2D31_00865 PF00416 Ribosomal protein S13/S18 L2D31_00870 PF00411 Ribosomal protein S11 L2D31_00875 PF03118 Bacterial RNA polymerase, alpha chain C terminal domain L2D31_00875 PF01193 RNA polymerase Rpb3/Rpb11 dimerisation domain L2D31_00875 PF01000 RNA polymerase Rpb3/RpoA insert domain L2D31_00880 PF01196 Ribosomal protein L17 L2D31_00885 PF00005 ABC transporter L2D31_00890 PF00005 ABC transporter L2D31_00895 PF02361 Cobalt transport protein L2D31_00900 PF01416 tRNA pseudouridine synthase L2D31_00905 PF00572 Ribosomal protein L13 L2D31_00910 PF00380 Ribosomal protein S9/S16 L2D31_00915 PF13302 Acetyltransferase (GNAT) domain L2D31_00940 PF10730 Protein of unknown function (DUF2521) L2D31_00945 PF01520 N-acetylmuramoyl-L-alanine amidase L2D31_00950 PF10609 NUBPL iron-transfer P-loop NTPase L2D31_00955 PF17898 Spore germination GerD central core domain L2D31_00960 PF14089 KinB-signalling pathway activation in sporulation L2D31_00965 PF01522 Polysaccharide deacetylase L2D31_00995 PF01740 STAS domain L2D31_00995 PF00916 Sulfate permease family L2D31_01000 PF01758 Sodium Bile acid symporter family L2D31_01005 PF07075 Protein of unknown function (DUF1343) L2D31_01010 PF00933 Glycosyl hydrolase family 3 N terminal domain L2D31_01010 PF01915 Glycosyl hydrolase family 3 C-terminal domain L2D31_01015 PF00144 Beta-lactamase L2D31_01020 PF00367 phosphotransferase system, EIIB L2D31_01020 PF02378 Phosphotransferase system, EIIC L2D31_01025 PF01380 SIS domain L2D31_01025 PF01418 Helix-turn-helix domain, rpiR family L2D31_01030 PF13580 SIS domain L2D31_01060 PF00491 Arginase family L2D31_01065 PF04542 Sigma-70 region 2 L2D31_01065 PF08281 Sigma-70, region 4 L2D31_01070 PF13490 Putative zinc-finger L2D31_01075 PF02457 DisA bacterial checkpoint controller nucleotide-binding L2D31_01080 PF07949 YbbR-like protein L2D31_01085 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I L2D31_01085 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II L2D31_01085 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III L2D31_01085 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain L2D31_01090 PF01380 SIS domain L2D31_01105 PF13732 Domain of unknown function (DUF4162) L2D31_01105 PF00005 ABC transporter L2D31_01115 PF00005 ABC transporter L2D31_01120 PF00005 ABC transporter L2D31_01120 PF02687 FtsX-like permease family L2D31_01120 PF12704 MacB-like periplasmic core domain L2D31_01140 PF04055 Radical SAM superfamily L2D31_01140 PF13186 Iron-sulfur cluster-binding domain L2D31_01145 PF02517 CPBP intramembrane metalloprotease L2D31_01150 PF00005 ABC transporter L2D31_01165 PF13905 Thioredoxin-like L2D31_01175 PF00550 Phosphopantetheine attachment site L2D31_01175 PF00501 AMP-binding enzyme L2D31_01175 PF13193 AMP-binding enzyme C-terminal domain L2D31_01175 PF00668 Condensation domain L2D31_01180 PF04235 Protein of unknown function (DUF418) L2D31_01190 PF00005 ABC transporter L2D31_01200 PF01381 Helix-turn-helix L2D31_01210 PF00561 alpha/beta hydrolase fold L2D31_01215 PF12833 Helix-turn-helix domain L2D31_01220 PF00440 Bacterial regulatory proteins, tetR family L2D31_01220 PF17922 Tetracyclin repressor-like, C-terminal domain L2D31_01235 PF00324 Amino acid permease L2D31_01240 PF03009 Glycerophosphoryl diester phosphodiesterase family L2D31_01245 PF07690 Major Facilitator Superfamily L2D31_01255 PF03190 Protein of unknown function, DUF255 L2D31_01285 PF02583 Metal-sensitive transcriptional repressor L2D31_01290 PF13686 DsrE/DsrF/DrsH-like family L2D31_01300 PF01206 Sulfurtransferase TusA L2D31_01300 PF00581 Rhodanese-like domain L2D31_01305 PF00753 Metallo-beta-lactamase superfamily L2D31_01305 PF00581 Rhodanese-like domain L2D31_01310 PF01206 Sulfurtransferase TusA L2D31_01315 PF01925 Sulfite exporter TauE/SafE L2D31_01325 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) L2D31_01325 PF09180 Prolyl-tRNA synthetase, C-terminal L2D31_01325 PF03129 Anticodon binding domain L2D31_01330 PF07690 Major Facilitator Superfamily L2D31_01345 PF01047 MarR family L2D31_01350 PF04463 Protein of unknown function (DUF523) L2D31_01355 PF00248 Aldo/keto reductase family L2D31_01360 PF00465 Iron-containing alcohol dehydrogenase L2D31_01365 PF12368 Rhodanase C-terminal L2D31_01365 PF17773 UPF0176 acylphosphatase like domain L2D31_01365 PF00581 Rhodanese-like domain L2D31_01370 PF13520 Amino acid permease L2D31_01380 PF00874 PRD domain L2D31_01380 PF03123 CAT RNA binding domain L2D31_01385 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 L2D31_01385 PF00367 phosphotransferase system, EIIB L2D31_01385 PF02378 Phosphotransferase system, EIIC L2D31_01390 PF00232 Glycosyl hydrolase family 1 L2D31_01405 PF08279 HTH domain L2D31_01405 PF05043 Mga helix-turn-helix domain L2D31_01405 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 L2D31_01405 PF00874 PRD domain L2D31_01410 PF00480 ROK family L2D31_01415 PF09261 Alpha mannosidase middle domain L2D31_01415 PF07748 Glycosyl hydrolases family 38 C-terminal domain L2D31_01415 PF01074 Glycosyl hydrolases family 38 N-terminal domain L2D31_01425 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit L2D31_01430 PF00381 PTS HPr component phosphorylation site L2D31_01430 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 L2D31_01435 PF00082 Subtilase family L2D31_01435 PF17936 Bacterial Ig domain L2D31_01450 PF00324 Amino acid permease L2D31_01455 PF02574 Homocysteine S-methyltransferase L2D31_01460 PF10035 Uncharacterized protein conserved in bacteria (DUF2179) L2D31_01460 PF02588 Uncharacterised 5xTM membrane BCR, YitT family COG1284 L2D31_01480 PF07690 Major Facilitator Superfamily L2D31_01500 PF00082 Subtilase family L2D31_01505 PF01425 Amidase L2D31_01510 PF00440 Bacterial regulatory proteins, tetR family L2D31_01515 PF07883 Cupin domain L2D31_01520 PF01047 MarR family L2D31_01525 PF00501 AMP-binding enzyme L2D31_01525 PF13193 AMP-binding enzyme C-terminal domain L2D31_01530 PF13520 Amino acid permease L2D31_01540 PF00561 alpha/beta hydrolase fold L2D31_01545 PF01235 Sodium:alanine symporter family L2D31_01550 PF04960 Glutaminase L2D31_01555 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase L2D31_01560 PF00072 Response regulator receiver domain L2D31_01560 PF08664 YcbB domain L2D31_01565 PF02810 SEC-C motif L2D31_01565 PF05225 helix-turn-helix, Psq domain L2D31_01570 PF17118 Domain of unknown function (DUF5105) L2D31_01570 PF11611 Domain of unknown function (DUF4352) L2D31_01575 PF00248 Aldo/keto reductase family L2D31_01580 PF14501 GHKL domain L2D31_01585 PF04397 LytTr DNA-binding domain L2D31_01585 PF00072 Response regulator receiver domain L2D31_01590 PF00005 ABC transporter L2D31_01595 PF12679 ABC-2 family transporter protein L2D31_01610 PF11611 Domain of unknown function (DUF4352) L2D31_01610 PF17118 Domain of unknown function (DUF5105) L2D31_01615 PF07486 Cell Wall Hydrolase L2D31_01630 PF00296 Luciferase-like monooxygenase L2D31_01635 PF02342 TerD domain L2D31_01640 PF02342 TerD domain L2D31_01645 PF02342 TerD domain L2D31_01650 PF03741 Integral membrane protein TerC family L2D31_01675 PF14266 Putative component of 'biosynthetic module' L2D31_01680 PF05816 Toxic anion resistance protein (TelA) L2D31_01685 PF00571 CBS domain L2D31_01685 PF00005 ABC transporter L2D31_01690 PF00528 Binding-protein-dependent transport system inner membrane component L2D31_01695 PF04069 Substrate binding domain of ABC-type glycine betaine transport system L2D31_01710 PF01546 Peptidase family M20/M25/M40 L2D31_01710 PF07687 Peptidase dimerisation domain L2D31_01715 PF03606 C4-dicarboxylate anaerobic carrier L2D31_01720 PF00056 lactate/malate dehydrogenase, NAD binding domain L2D31_01720 PF02866 lactate/malate dehydrogenase, alpha/beta C-terminal domain L2D31_01725 PF02652 L-lactate permease L2D31_01730 PF00356 Bacterial regulatory proteins, lacI family L2D31_01735 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family L2D31_01740 PF05116 Sucrose-6F-phosphate phosphohydrolase L2D31_01745 PF02894 Oxidoreductase family, C-terminal alpha/beta domain L2D31_01745 PF01408 Oxidoreductase family, NAD-binding Rossmann fold L2D31_01750 PF07690 Major Facilitator Superfamily L2D31_01755 PF01810 LysE type translocator L2D31_01770 PF08892 YqcI/YcgG family L2D31_01775 PF00324 Amino acid permease L2D31_01780 PF09347 Domain of unknown function (DUF1989) L2D31_01785 PF02540 NAD synthase L2D31_01795 PF00171 Aldehyde dehydrogenase family L2D31_01800 PF01487 Type I 3-dehydroquinase L2D31_01805 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain L2D31_01805 PF00205 Thiamine pyrophosphate enzyme, central domain L2D31_01805 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain L2D31_01815 PF02515 CoA-transferase family III L2D31_01820 PF07690 Major Facilitator Superfamily L2D31_01830 PF09339 IclR helix-turn-helix domain L2D31_01830 PF01614 Bacterial transcriptional regulator L2D31_01835 PF01202 Shikimate kinase L2D31_01840 PF00701 Dihydrodipicolinate synthetase family L2D31_01845 PF00356 Bacterial regulatory proteins, lacI family L2D31_01850 PF07690 Major Facilitator Superfamily L2D31_01855 PF08241 Methyltransferase domain L2D31_01860 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family L2D31_01860 PF03466 LysR substrate binding domain L2D31_01865 PF00795 Carbon-nitrogen hydrolase L2D31_01870 PF05448 Acetyl xylan esterase (AXE1) L2D31_01880 PF10127 RNA repair pathway DNA polymerase beta family L2D31_01885 PF01619 Proline dehydrogenase L2D31_01890 PF00171 Aldehyde dehydrogenase family L2D31_01895 PF17853 GGDEF-like domain L2D31_01895 PF13556 PucR C-terminal helix-turn-helix domain L2D31_01900 PF02040 Arsenical pump membrane protein L2D31_01905 PF00528 Binding-protein-dependent transport system inner membrane component L2D31_01910 PF00497 Bacterial extracellular solute-binding proteins, family 3 L2D31_01915 PF10925 Protein of unknown function (DUF2680) L2D31_01920 PF12706 Beta-lactamase superfamily domain L2D31_01925 PF01037 Lrp/AsnC ligand binding domain L2D31_01930 PF02522 Aminoglycoside 3-N-acetyltransferase L2D31_01935 PF11033 Competence protein J (ComJ) L2D31_01940 PF17202 Single cache domain 3 L2D31_01940 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain L2D31_01940 PF00672 HAMP domain L2D31_01945 PF14040 Deoxyribonuclease NucA/NucB L2D31_01950 PF05378 Hydantoinase/oxoprolinase N-terminal region L2D31_01950 PF01968 Hydantoinase/oxoprolinase L2D31_01965 PF00005 ABC transporter L2D31_01965 PF08402 TOBE domain L2D31_01970 PF00528 Binding-protein-dependent transport system inner membrane component L2D31_01975 PF00528 Binding-protein-dependent transport system inner membrane component L2D31_01980 PF00501 AMP-binding enzyme L2D31_01980 PF00668 Condensation domain L2D31_01980 PF00550 Phosphopantetheine attachment site L2D31_01980 PF13193 AMP-binding enzyme C-terminal domain L2D31_01985 PF13193 AMP-binding enzyme C-terminal domain L2D31_01985 PF00501 AMP-binding enzyme L2D31_01985 PF00550 Phosphopantetheine attachment site L2D31_01985 PF00668 Condensation domain L2D31_01990 PF00501 AMP-binding enzyme L2D31_01990 PF13193 AMP-binding enzyme C-terminal domain L2D31_01990 PF00668 Condensation domain L2D31_01990 PF00550 Phosphopantetheine attachment site L2D31_01990 PF00975 Thioesterase domain L2D31_01995 PF13193 AMP-binding enzyme C-terminal domain L2D31_01995 PF00668 Condensation domain L2D31_01995 PF00501 AMP-binding enzyme L2D31_01995 PF00550 Phosphopantetheine attachment site L2D31_02000 PF00501 AMP-binding enzyme L2D31_02000 PF13193 AMP-binding enzyme C-terminal domain L2D31_02000 PF00668 Condensation domain L2D31_02000 PF00550 Phosphopantetheine attachment site L2D31_02005 PF00975 Thioesterase domain L2D31_02010 PF00005 ABC transporter L2D31_02020 PF00892 EamA-like transporter family L2D31_02025 PF00392 Bacterial regulatory proteins, gntR family L2D31_02025 PF00155 Aminotransferase class I and II L2D31_02030 PF01648 4'-phosphopantetheinyl transferase superfamily L2D31_02045 PF04203 Sortase domain L2D31_02050 PF18277 AbrB C-terminal domain L2D31_02050 PF04014 Antidote-toxin recognition MazE, bacterial antitoxin L2D31_02055 PF00005 ABC transporter L2D31_02060 PF00528 Binding-protein-dependent transport system inner membrane component L2D31_02065 PF00497 Bacterial extracellular solute-binding proteins, family 3 L2D31_02070 PF00067 Cytochrome P450 L2D31_02075 PF01738 Dienelactone hydrolase family L2D31_02080 PF12832 MFS_1 like family L2D31_02090 PF00324 Amino acid permease L2D31_02095 PF00854 POT family L2D31_02100 PF13229 Right handed beta helix region L2D31_02100 PF12708 Pectate lyase superfamily protein L2D31_02105 PF00296 Luciferase-like monooxygenase L2D31_02110 PF00583 Acetyltransferase (GNAT) family L2D31_02115 PF00497 Bacterial extracellular solute-binding proteins, family 3 L2D31_02120 PF00528 Binding-protein-dependent transport system inner membrane component L2D31_02125 PF00005 ABC transporter L2D31_02130 PF07687 Peptidase dimerisation domain L2D31_02130 PF01546 Peptidase family M20/M25/M40 L2D31_02135 PF03972 MmgE/PrpD family L2D31_02140 PF00072 Response regulator receiver domain L2D31_02140 PF00486 Transcriptional regulatory protein, C terminal L2D31_02145 PF00672 HAMP domain L2D31_02145 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase L2D31_02145 PF00512 His Kinase A (phospho-acceptor) domain L2D31_02150 PF14361 RsbT co-antagonist protein rsbRD N-terminal domain L2D31_02150 PF01740 STAS domain L2D31_02155 PF00696 Amino acid kinase family L2D31_02155 PF13840 ACT domain L2D31_02160 PF07690 Major Facilitator Superfamily L2D31_02165 PF00440 Bacterial regulatory proteins, tetR family L2D31_02175 PF01022 Bacterial regulatory protein, arsR family L2D31_02185 PF03466 LysR substrate binding domain L2D31_02185 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family L2D31_02190 PF00155 Aminotransferase class I and II L2D31_02190 PF00392 Bacterial regulatory proteins, gntR family L2D31_02195 PF00202 Aminotransferase class-III L2D31_02200 PF13520 Amino acid permease L2D31_02205 PF00171 Aldehyde dehydrogenase family L2D31_02210 PF02525 Flavodoxin-like fold L2D31_02215 PF07987 Domain of unkown function (DUF1775) L2D31_02220 PF04234 CopC domain L2D31_02220 PF13115 YtkA-like L2D31_02220 PF05425 Copper resistance protein D L2D31_02225 PF02378 Phosphotransferase system, EIIC L2D31_02225 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit L2D31_02230 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 L2D31_02235 PF08125 Mannitol dehydrogenase C-terminal domain L2D31_02235 PF01232 Mannitol dehydrogenase Rossmann domain L2D31_02240 PF00672 HAMP domain L2D31_02240 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain L2D31_02240 PF02743 Cache domain L2D31_02275 PF12681 Glyoxalase-like domain L2D31_02280 PF05901 Excalibur calcium-binding domain L2D31_02290 PF03746 LamB/YcsF family L2D31_02295 PF01566 Natural resistance-associated macrophage protein L2D31_02300 PF07286 Protein of unknown function (DUF1445) L2D31_02305 PF02682 Carboxyltransferase domain, subdomain C and D L2D31_02310 PF02626 Carboxyltransferase domain, subdomain A and B L2D31_02315 PF09339 IclR helix-turn-helix domain L2D31_02315 PF01614 Bacterial transcriptional regulator L2D31_02320 PF02525 Flavodoxin-like fold L2D31_02325 PF13472 GDSL-like Lipase/Acylhydrolase family L2D31_02335 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit L2D31_02335 PF05043 Mga helix-turn-helix domain L2D31_02335 PF08279 HTH domain L2D31_02335 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 L2D31_02335 PF00874 PRD domain L2D31_02340 PF13649 Methyltransferase domain L2D31_02350 PF16242 Pyridoxamine 5'-phosphate oxidase like L2D31_02370 PF12823 Domain of unknown function (DUF3817) L2D31_02375 PF07729 FCD domain L2D31_02375 PF00392 Bacterial regulatory proteins, gntR family L2D31_02380 PF12833 Helix-turn-helix domain L2D31_02380 PF02311 AraC-like ligand binding domain L2D31_02385 PF00892 EamA-like transporter family L2D31_02390 PF00180 Isocitrate/isopropylmalate dehydrogenase L2D31_02395 PF01131 DNA topoisomerase L2D31_02395 PF01751 Toprim domain L2D31_02405 PF00990 Diguanylate cyclase, GGDEF domain L2D31_02410 PF10096 Uncharacterized protein conserved in bacteria (DUF2334) L2D31_02420 PF03170 Bacterial cellulose synthase subunit L2D31_02425 PF13520 Amino acid permease L2D31_02430 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain L2D31_02430 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain L2D31_02430 PF00205 Thiamine pyrophosphate enzyme, central domain L2D31_02435 PF04740 LXG domain of WXG superfamily L2D31_02435 PF14449 Pre-toxin TG L2D31_02435 PF14410 HNH/ENDO VII superfamily nuclease with conserved GHE residues L2D31_02440 PF18593 CdiI immunity protein L2D31_02475 PF13302 Acetyltransferase (GNAT) domain L2D31_02480 PF01566 Natural resistance-associated macrophage protein L2D31_02485 PF04226 Transglycosylase associated protein L2D31_02490 PF12787 EcsC protein family L2D31_02495 PF03480 Bacterial extracellular solute-binding protein, family 7 L2D31_02500 PF14689 Sensor_kinase_SpoOB-type, alpha-helical domain L2D31_02500 PF17203 Single cache domain 3 L2D31_02500 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase L2D31_02505 PF08279 HTH domain L2D31_02505 PF00072 Response regulator receiver domain L2D31_02510 PF00375 Sodium:dicarboxylate symporter family L2D31_02515 PF01594 AI-2E family transporter L2D31_02520 PF00375 Sodium:dicarboxylate symporter family L2D31_02525 PF00005 ABC transporter L2D31_02540 PF13040 Fur-regulated basic protein B L2D31_02545 PF00085 Thioredoxin L2D31_02550 PF07478 D-ala D-ala ligase C-terminus L2D31_02550 PF01820 D-ala D-ala ligase N-terminus L2D31_02555 PF01225 Mur ligase family, catalytic domain L2D31_02555 PF02875 Mur ligase family, glutamate ligase domain L2D31_02555 PF08245 Mur ligase middle domain L2D31_02560 PF12146 Serine aminopeptidase, S33 L2D31_02570 PF00270 DEAD/DEAH box helicase L2D31_02570 PF00271 Helicase conserved C-terminal domain L2D31_02575 PF03703 Bacterial PH domain L2D31_02580 PF03703 Bacterial PH domain L2D31_02585 PF01694 Rhomboid family L2D31_02590 PF01648 4'-phosphopantetheinyl transferase superfamily L2D31_02600 PF00842 Alanine racemase, C-terminal domain L2D31_02600 PF01168 Alanine racemase, N-terminal domain L2D31_02605 PF01402 Ribbon-helix-helix protein, copG family L2D31_02610 PF02452 PemK-like, MazF-like toxin of type II toxin-antitoxin system L2D31_02615 PF08678 Rsbr N terminal L2D31_02615 PF01740 STAS domain L2D31_02620 PF01740 STAS domain L2D31_02625 PF13581 Histidine kinase-like ATPase domain L2D31_02630 PF07228 Stage II sporulation protein E (SpoIIE) L2D31_02630 PF08673 Phosphoserine phosphatase RsbU, N-terminal domain L2D31_02635 PF01740 STAS domain L2D31_02640 PF13581 Histidine kinase-like ATPase domain L2D31_02645 PF04545 Sigma-70, region 4 L2D31_02645 PF04539 Sigma-70 region 3 L2D31_02645 PF04542 Sigma-70 region 2 L2D31_02650 PF07228 Stage II sporulation protein E (SpoIIE) L2D31_02655 PF16921 Tex protein YqgF-like domain L2D31_02655 PF09371 Tex-like protein N-terminal domain L2D31_02655 PF00575 S1 RNA binding domain L2D31_02655 PF17674 HHH domain L2D31_02665 PF17283 SprT-like zinc ribbon domain L2D31_02665 PF10263 SprT-like family L2D31_02705 PF00440 Bacterial regulatory proteins, tetR family L2D31_02710 PF00561 alpha/beta hydrolase fold L2D31_02710 PF00364 Biotin-requiring enzyme L2D31_02715 PF00724 NADH:flavin oxidoreductase / NADH oxidase family L2D31_02720 PF00106 short chain dehydrogenase L2D31_02725 PF00561 alpha/beta hydrolase fold L2D31_02725 PF00106 short chain dehydrogenase L2D31_02735 PF00313 'Cold-shock' DNA-binding domain L2D31_02740 PF02559 CarD-like/TRCF domain L2D31_02745 PF08240 Alcohol dehydrogenase GroES-like domain L2D31_02745 PF00107 Zinc-binding dehydrogenase L2D31_02750 PF13411 MerR HTH family regulatory protein L2D31_02755 PF00722 Glycosyl hydrolases family 16 L2D31_02765 PF00440 Bacterial regulatory proteins, tetR family L2D31_02770 PF07690 Major Facilitator Superfamily L2D31_02785 PF00106 short chain dehydrogenase L2D31_02795 PF17763 Glutaminase/Asparaginase C-terminal domain L2D31_02795 PF00710 Asparaginase, N-terminal L2D31_02815 PF16925 Tetracyclin repressor-like, C-terminal domain L2D31_02815 PF00440 Bacterial regulatory proteins, tetR family L2D31_02820 PF07690 Major Facilitator Superfamily L2D31_02850 PF00583 Acetyltransferase (GNAT) family L2D31_02855 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily L2D31_02865 PF00440 Bacterial regulatory proteins, tetR family L2D31_02870 PF01872 RibD C-terminal domain L2D31_02875 PF01047 MarR family L2D31_02880 PF00881 Nitroreductase family L2D31_02895 PF01381 Helix-turn-helix L2D31_02895 PF07883 Cupin domain L2D31_02900 PF01810 LysE type translocator L2D31_02905 PF00583 Acetyltransferase (GNAT) family L2D31_02920 PF01596 O-methyltransferase L2D31_02930 PF03591 AzlC protein L2D31_02935 PF00892 EamA-like transporter family L2D31_02945 PF00375 Sodium:dicarboxylate symporter family L2D31_02985 PF02769 AIR synthase related protein, C-terminal domain L2D31_02985 PF00586 AIR synthase related protein, N-terminal domain L2D31_02990 PF02367 Threonylcarbamoyl adenosine biosynthesis protein TsaE L2D31_02995 PF00814 Glycoprotease family L2D31_03000 PF00583 Acetyltransferase (GNAT) family L2D31_03005 PF00814 Glycoprotease family L2D31_03010 PF00005 ABC transporter L2D31_03010 PF12848 ABC transporter L2D31_03010 PF16326 ABC transporter C-terminal domain L2D31_03015 PF01967 MoaC family L2D31_03020 PF02629 CoA binding domain L2D31_03020 PF06971 Putative DNA-binding protein N-terminus L2D31_03025 PF02416 mttA/Hcf106 family L2D31_03030 PF00902 Sec-independent protein translocase protein (TatC) L2D31_03040 PF14146 Domain of unknown function (DUF4305) L2D31_03045 PF02517 CPBP intramembrane metalloprotease L2D31_03050 PF00166 Chaperonin 10 Kd subunit L2D31_03055 PF00118 TCP-1/cpn60 chaperonin family L2D31_03060 PF01047 MarR family L2D31_03065 PF04299 Putative FMN-binding domain L2D31_03070 PF02557 D-alanyl-D-alanine carboxypeptidase L2D31_03095 PF03330 Lytic transglycolase L2D31_03100 PF07676 WD40-like Beta Propeller Repeat L2D31_03110 PF00394 Multicopper oxidase L2D31_03110 PF07731 Multicopper oxidase L2D31_03110 PF07732 Multicopper oxidase L2D31_03115 PF00324 Amino acid permease L2D31_03120 PF01545 Cation efflux family L2D31_03120 PF16916 Dimerisation domain of Zinc Transporter L2D31_03125 PF07726 ATPase family associated with various cellular activities (AAA) L2D31_03125 PF17863 AAA lid domain L2D31_03130 PF01882 Protein of unknown function DUF58 L2D31_03135 PF13559 Domain of unknown function (DUF4129) L2D31_03135 PF01841 Transglutaminase-like superfamily L2D31_03135 PF11992 Domain of unknown function (DUF3488) L2D31_03140 PF02540 NAD synthase L2D31_03140 PF00117 Glutamine amidotransferase class-I L2D31_03140 PF00958 GMP synthase C terminal domain L2D31_03145 PF04073 Aminoacyl-tRNA editing domain L2D31_03150 PF12833 Helix-turn-helix domain L2D31_03155 PF08502 LeuA allosteric (dimerisation) domain L2D31_03155 PF00682 HMGL-like L2D31_03160 PF12833 Helix-turn-helix domain L2D31_03190 PF13302 Acetyltransferase (GNAT) domain L2D31_03210 PF07690 Major Facilitator Superfamily L2D31_03215 PF03466 LysR substrate binding domain L2D31_03215 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family L2D31_03220 PF00860 Permease family L2D31_03230 PF10055 Uncharacterized small protein (DUF2292) L2D31_03240 PF10035 Uncharacterized protein conserved in bacteria (DUF2179) L2D31_03245 PF14044 NETI protein L2D31_03250 PF00731 AIR carboxylase L2D31_03255 PF02222 ATP-grasp domain L2D31_03255 PF17769 Phosphoribosylaminoimidazole carboxylase C-terminal domain L2D31_03260 PF10397 Adenylosuccinate lyase C-terminus L2D31_03260 PF00206 Lyase L2D31_03265 PF01259 SAICAR synthetase L2D31_03270 PF02700 Phosphoribosylformylglycinamidine (FGAM) synthase L2D31_03280 PF02769 AIR synthase related protein, C-terminal domain L2D31_03280 PF00586 AIR synthase related protein, N-terminal domain L2D31_03280 PF18072 Formylglycinamide ribonucleotide amidotransferase linker domain L2D31_03285 PF00156 Phosphoribosyl transferase domain L2D31_03290 PF02769 AIR synthase related protein, C-terminal domain L2D31_03290 PF00586 AIR synthase related protein, N-terminal domain L2D31_03295 PF00551 Formyl transferase L2D31_03300 PF02142 MGS-like domain L2D31_03300 PF01808 AICARFT/IMPCHase bienzyme L2D31_03305 PF01071 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain L2D31_03305 PF02843 Phosphoribosylglycinamide synthetase, C domain L2D31_03305 PF02844 Phosphoribosylglycinamide synthetase, N domain L2D31_03330 PF00005 ABC transporter L2D31_03345 PF00202 Aminotransferase class-III L2D31_03350 PF01144 Coenzyme A transferase L2D31_03355 PF01144 Coenzyme A transferase L2D31_03360 PF01546 Peptidase family M20/M25/M40 L2D31_03360 PF07687 Peptidase dimerisation domain L2D31_03365 PF11127 Protein of unknown function (DUF2892) L2D31_03370 PF13382 Adenine deaminase C-terminal domain L2D31_03370 PF01979 Amidohydrolase family L2D31_03375 PF01371 Trp repressor protein L2D31_03385 PF01645 Conserved region in glutamate synthase L2D31_03400 PF01884 PcrB family L2D31_03405 PF00580 UvrD/REP helicase N-terminal domain L2D31_03405 PF13361 UvrD-like helicase C-terminal domain L2D31_03410 PF00533 BRCA1 C Terminus (BRCT) domain L2D31_03410 PF01653 NAD-dependent DNA ligase adenylation domain L2D31_03410 PF03120 NAD-dependent DNA ligase OB-fold domain L2D31_03410 PF03119 NAD-dependent DNA ligase C4 zinc finger domain L2D31_03410 PF12826 Helix-hairpin-helix motif L2D31_03415 PF07537 CamS sex pheromone cAM373 precursor L2D31_03420 PF01636 Phosphotransferase enzyme family L2D31_03425 PF02308 MgtC family L2D31_03430 PF00474 Sodium:solute symporter family L2D31_03435 PF02686 Glu-tRNAGln amidotransferase C subunit L2D31_03440 PF01425 Amidase L2D31_03445 PF02637 GatB domain L2D31_03445 PF02934 GatB/GatE catalytic domain L2D31_03450 PF00440 Bacterial regulatory proteins, tetR family L2D31_03455 PF00873 AcrB/AcrD/AcrF family L2D31_03460 PF01156 Inosine-uridine preferring nucleoside hydrolase L2D31_03465 PF00781 Diacylglycerol kinase catalytic domain L2D31_03470 PF01938 TRAM domain L2D31_03470 PF05958 tRNA (Uracil-5-)-methyltransferase L2D31_03475 PF01207 Dihydrouridine synthase (Dus) L2D31_03490 PF02082 Transcriptional regulator L2D31_03495 PF07992 Pyridine nucleotide-disulphide oxidoreductase L2D31_03505 PF13021 Domain of unknown function (DUF3885) L2D31_03510 PF02056 Family 4 glycosyl hydrolase L2D31_03510 PF11975 Family 4 glycosyl hydrolase C-terminal domain L2D31_03515 PF01418 Helix-turn-helix domain, rpiR family L2D31_03515 PF01380 SIS domain L2D31_03530 PF03466 LysR substrate binding domain L2D31_03530 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family L2D31_03540 PF13037 Domain of unknown function (DUF3898) L2D31_03540 PF13039 Protein of unknown function (DUF3900) L2D31_03550 PF00483 Nucleotidyl transferase L2D31_03555 PF16363 GDP-mannose 4,6 dehydratase L2D31_03560 PF03407 Nucleotide-diphospho-sugar transferase L2D31_03565 PF00535 Glycosyl transferase family 2 L2D31_03570 PF03407 Nucleotide-diphospho-sugar transferase L2D31_03575 PF07690 Major Facilitator Superfamily L2D31_03580 PF05223 NTF2-like N-terminal transpeptidase domain L2D31_03580 PF03717 Penicillin-binding Protein dimerisation domain L2D31_03580 PF00905 Penicillin binding protein transpeptidase domain L2D31_03585 PF00939 Sodium:sulfate symporter transmembrane region L2D31_03600 PF00011 Hsp20/alpha crystallin family L2D31_03615 PF13520 Amino acid permease L2D31_03620 PF00535 Glycosyl transferase family 2 L2D31_03620 PF13181 Tetratricopeptide repeat L2D31_03625 PF00005 ABC transporter L2D31_03625 PF16326 ABC transporter C-terminal domain L2D31_03625 PF12848 ABC transporter L2D31_03630 PF02649 Type I GTP cyclohydrolase folE2 L2D31_03635 PF13411 MerR HTH family regulatory protein L2D31_03640 PF07690 Major Facilitator Superfamily L2D31_03645 PF00005 ABC transporter L2D31_03645 PF12848 ABC transporter L2D31_03650 PF00270 DEAD/DEAH box helicase L2D31_03650 PF00271 Helicase conserved C-terminal domain L2D31_03655 PF16884 N-terminal domain of oxidoreductase L2D31_03655 PF00107 Zinc-binding dehydrogenase L2D31_03660 PF11486 Protein of unknown function (DUF3212) L2D31_03665 PF11181 Heat induced stress protein YflT L2D31_03675 PF00925 GTP cyclohydrolase II L2D31_03675 PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase L2D31_03680 PF03781 Sulfatase-modifying factor enzyme 1 L2D31_03690 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region L2D31_03690 PF01872 RibD C-terminal domain L2D31_03700 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase L2D31_03700 PF14689 Sensor_kinase_SpoOB-type, alpha-helical domain L2D31_03705 PF12431 Transcriptional regulator L2D31_03705 PF08279 HTH domain L2D31_03705 PF00072 Response regulator receiver domain L2D31_03710 PF03401 Tripartite tricarboxylate transporter family receptor L2D31_03715 PF03600 Citrate transporter L2D31_03725 PF05870 Phenolic acid decarboxylase (PAD) L2D31_03730 PF03551 Transcriptional regulator PadR-like family L2D31_03730 PF10400 Virulence activator alpha C-term L2D31_03735 PF02898 Nitric oxide synthase, oxygenase domain L2D31_03745 PF00708 Acylphosphatase L2D31_03750 PF03475 3-alpha domain L2D31_03750 PF03473 MOSC domain L2D31_03755 PF11121 Protein of unknown function (DUF2639) L2D31_03765 PF00557 Metallopeptidase family M24 L2D31_03770 PF00367 phosphotransferase system, EIIB L2D31_03770 PF02378 Phosphotransferase system, EIIC L2D31_03780 PF16302 Domain of unknown function (DUF4944) L2D31_03790 PF14172 Domain of unknown function (DUF4309) L2D31_03795 PF00884 Sulfatase L2D31_03800 PF00282 Pyridoxal-dependent decarboxylase conserved domain L2D31_03805 PF00672 HAMP domain L2D31_03805 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain L2D31_03810 PF09350 Domain of unknown function (DUF1992) L2D31_03815 PF02378 Phosphotransferase system, EIIC L2D31_03815 PF00367 phosphotransferase system, EIIB L2D31_03820 PF00128 Alpha amylase, catalytic domain L2D31_03820 PF16657 Maltogenic Amylase, C-terminal domain L2D31_03825 PF07702 UTRA domain L2D31_03825 PF00392 Bacterial regulatory proteins, gntR family L2D31_03835 PF02872 5'-nucleotidase, C-terminal domain L2D31_03835 PF00149 Calcineurin-like phosphoesterase L2D31_03840 PF01965 DJ-1/PfpI family L2D31_03845 PF06569 Protein of unknown function (DUF1128) L2D31_03850 PF01235 Sodium:alanine symporter family L2D31_03855 PF01451 Low molecular weight phosphotyrosine protein phosphatase L2D31_03865 PF03631 Virulence factor BrkB L2D31_03870 PF13302 Acetyltransferase (GNAT) domain L2D31_03875 PF07690 Major Facilitator Superfamily L2D31_03885 PF01699 Sodium/calcium exchanger protein L2D31_03890 PF14167 YfkD-like protein L2D31_03895 PF01709 Transcriptional regulator L2D31_03905 PF00924 Mechanosensitive ion channel L2D31_03910 PF04055 Radical SAM superfamily L2D31_03910 PF08756 YfkB-like domain L2D31_03920 PF01522 Polysaccharide deacetylase L2D31_03925 PF10898 Protein of unknown function (DUF2716) L2D31_03930 PF01544 CorA-like Mg2+ transporter protein L2D31_03940 PF00730 HhH-GPD superfamily base excision DNA repair protein L2D31_03945 PF01938 TRAM domain L2D31_03945 PF05958 tRNA (Uracil-5-)-methyltransferase L2D31_03960 PF13411 MerR HTH family regulatory protein L2D31_03960 PF07739 TipAS antibiotic-recognition domain L2D31_03965 PF07690 Major Facilitator Superfamily L2D31_03980 PF03129 Anticodon binding domain L2D31_03980 PF02824 TGS domain L2D31_03980 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) L2D31_03980 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain L2D31_04025 PF00893 Small Multidrug Resistance protein L2D31_04030 PF00893 Small Multidrug Resistance protein L2D31_04035 PF17934 Tetracyclin repressor-like, C-terminal domain L2D31_04035 PF00440 Bacterial regulatory proteins, tetR family L2D31_04050 PF00657 GDSL-like Lipase/Acylhydrolase L2D31_04055 PF07992 Pyridine nucleotide-disulphide oxidoreductase L2D31_04060 PF12833 Helix-turn-helix domain L2D31_04060 PF02805 Metal binding domain of Ada L2D31_04065 PF01497 Periplasmic binding protein L2D31_04070 PF00005 ABC transporter L2D31_04070 PF00664 ABC transporter transmembrane region L2D31_04075 PF02694 Uncharacterised BCR, YnfA/UPF0060 family L2D31_04080 PF04545 Sigma-70, region 4 L2D31_04080 PF04542 Sigma-70 region 2 L2D31_04095 PF08240 Alcohol dehydrogenase GroES-like domain L2D31_04095 PF00107 Zinc-binding dehydrogenase L2D31_04100 PF12867 DinB superfamily L2D31_04110 PF01047 MarR family L2D31_04115 PF09924 Uncharacterised conserved protein (DUF2156) L2D31_04115 PF03706 Lysylphosphatidylglycerol synthase TM region L2D31_04130 PF18801 response regulator aspartate phosphatase H, N terminal L2D31_04135 PF00881 Nitroreductase family L2D31_04150 PF08338 Domain of unknown function (DUF1731) L2D31_04150 PF01370 NAD dependent epimerase/dehydratase family L2D31_04155 PF02631 RecX family L2D31_04160 PF08838 Protein of unknown function (DUF1811) L2D31_04170 PF08176 Small acid-soluble spore protein K family L2D31_04175 PF14043 WVELL protein L2D31_04180 PF00535 Glycosyl transferase family 2 L2D31_04185 PF09586 Bacterial membrane protein YfhO L2D31_04190 PF01494 FAD binding domain L2D31_04205 PF00190 Cupin L2D31_04210 PF12841 YvrJ protein family L2D31_04215 PF04545 Sigma-70, region 4 L2D31_04260 PF04307 LexA-binding, inner membrane-associated putative hydrolase L2D31_04265 PF14815 NUDIX domain L2D31_04265 PF00730 HhH-GPD superfamily base excision DNA repair protein L2D31_04290 PF04167 Protein of unknown function (DUF402) L2D31_04295 PF00005 ABC transporter L2D31_04295 PF00664 ABC transporter transmembrane region L2D31_04300 PF08352 Oligopeptide/dipeptide transporter, C-terminal region L2D31_04300 PF00005 ABC transporter L2D31_04305 PF08352 Oligopeptide/dipeptide transporter, C-terminal region L2D31_04305 PF00005 ABC transporter L2D31_04310 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle L2D31_04315 PF00528 Binding-protein-dependent transport system inner membrane component L2D31_04320 PF12911 N-terminal TM domain of oligopeptide transport permease C L2D31_04320 PF00528 Binding-protein-dependent transport system inner membrane component L2D31_04325 PF06081 Aromatic acid exporter family member 1 L2D31_04330 PF00202 Aminotransferase class-III L2D31_04335 PF00578 AhpC/TSA family L2D31_04340 PF01475 Ferric uptake regulator family L2D31_04345 PF11023 Zinc-ribbon containing domain L2D31_04350 PF18576 Helix-turn-helix domain L2D31_04350 PF14540 Nucleotidyltransferase-like L2D31_04485 PF00884 Sulfatase L2D31_04490 PF10502 Signal peptidase, peptidase S26 L2D31_04495 PF01053 Cys/Met metabolism PLP-dependent enzyme L2D31_04505 PF00005 ABC transporter L2D31_04510 PF09084 NMT1/THI5 like L2D31_04515 PF00528 Binding-protein-dependent transport system inner membrane component L2D31_04520 PF00296 Luciferase-like monooxygenase L2D31_04530 PF00005 ABC transporter L2D31_04565 PF08331 Domain of unknown function (DUF1730) L2D31_04570 PF12671 Putative amidase domain L2D31_04575 PF00588 SpoU rRNA Methylase family L2D31_04580 PF08298 PrkA AAA domain L2D31_04580 PF06798 PrkA serine protein kinase C-terminal domain L2D31_04585 PF04285 Protein of unknown function (DUF444) L2D31_04595 PF07690 Major Facilitator Superfamily L2D31_04600 PF03358 NADPH-dependent FMN reductase L2D31_04610 PF00313 'Cold-shock' DNA-binding domain L2D31_04615 PF07694 5TMR of 5TMR-LYT L2D31_04615 PF00990 Diguanylate cyclase, GGDEF domain L2D31_04630 PF09580 Sporulation lipoprotein YhcN/YlaJ (Spore_YhcN_YlaJ) L2D31_04640 PF07875 Coat F domain L2D31_04645 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase L2D31_04645 PF00512 His Kinase A (phospho-acceptor) domain L2D31_04645 PF00989 PAS fold L2D31_04645 PF13188 PAS domain L2D31_04645 PF13426 PAS domain L2D31_04650 PF02872 5'-nucleotidase, C-terminal domain L2D31_04650 PF00746 LPXTG cell wall anchor motif L2D31_04650 PF00149 Calcineurin-like phosphoesterase L2D31_04650 PF00565 Staphylococcal nuclease homologue L2D31_04655 PF04203 Sortase domain L2D31_04660 PF00849 RNA pseudouridylate synthase L2D31_04660 PF01479 S4 domain L2D31_04670 PF13419 Haloacid dehalogenase-like hydrolase L2D31_04675 PF00583 Acetyltransferase (GNAT) family L2D31_04675 PF00795 Carbon-nitrogen hydrolase L2D31_04695 PF05651 Putative sugar diacid recognition L2D31_04695 PF17853 GGDEF-like domain L2D31_04695 PF13556 PucR C-terminal helix-turn-helix domain L2D31_04700 PF00202 Aminotransferase class-III L2D31_04705 PF04309 Glycerol-3-phosphate responsive antiterminator L2D31_04710 PF00230 Major intrinsic protein L2D31_04715 PF02782 FGGY family of carbohydrate kinases, C-terminal domain L2D31_04715 PF00370 FGGY family of carbohydrate kinases, N-terminal domain L2D31_04720 PF16901 C-terminal domain of alpha-glycerophosphate oxidase L2D31_04720 PF01266 FAD dependent oxidoreductase L2D31_04725 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III L2D31_04725 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain L2D31_04725 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I L2D31_04725 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II L2D31_04730 PF13185 GAF domain L2D31_04730 PF07730 Histidine kinase L2D31_04735 PF00196 Bacterial regulatory proteins, luxR family L2D31_04735 PF00072 Response regulator receiver domain L2D31_04740 PF14148 YhdB-like protein L2D31_04745 PF13028 Protein of unknown function (DUF3889) L2D31_04750 PF00199 Catalase L2D31_04750 PF06628 Catalase-related immune-responsive L2D31_04755 PF02082 Transcriptional regulator L2D31_04760 PF00970 Oxidoreductase FAD-binding domain L2D31_04760 PF00175 Oxidoreductase NAD-binding domain L2D31_04760 PF00042 Globin L2D31_04765 PF04293 SpoVR like protein L2D31_04770 PF00245 Alkaline phosphatase L2D31_04775 PF01476 LysM domain L2D31_04775 PF00877 NlpC/P60 family L2D31_04780 PF13520 Amino acid permease L2D31_04785 PF17453 Sigma-M inhibitor L2D31_04790 PF13800 Sigma factor regulator N-terminal L2D31_04790 PF13791 Sigma factor regulator C-terminal L2D31_04795 PF08281 Sigma-70, region 4 L2D31_04795 PF04542 Sigma-70 region 2 L2D31_04800 PF01553 Acyltransferase L2D31_04805 PF03471 Transporter associated domain L2D31_04805 PF01595 Cyclin M transmembrane N-terminal domain L2D31_04805 PF00571 CBS domain L2D31_04810 PF13411 MerR HTH family regulatory protein L2D31_04815 PF00571 CBS domain L2D31_04815 PF03471 Transporter associated domain L2D31_04815 PF01595 Cyclin M transmembrane N-terminal domain L2D31_04825 PF02537 CrcB-like protein, Camphor Resistance (CrcB) L2D31_04830 PF02537 CrcB-like protein, Camphor Resistance (CrcB) L2D31_04835 PF03009 Glycerophosphoryl diester phosphodiesterase family L2D31_04840 PF17444 Uncharacterized YhdX-like L2D31_04845 PF00924 Mechanosensitive ion channel L2D31_04850 PF02146 Sir2 family L2D31_04855 PF01522 Polysaccharide deacetylase L2D31_04860 PF01063 Amino-transferase class IV L2D31_04865 PF00582 Universal stress protein family L2D31_04870 PF00664 ABC transporter transmembrane region L2D31_04870 PF00005 ABC transporter L2D31_04875 PF00664 ABC transporter transmembrane region L2D31_04875 PF00005 ABC transporter L2D31_04885 PF13460 NAD(P)H-binding L2D31_04890 PF00269 Small, acid-soluble spore proteins, alpha/beta type L2D31_04895 PF00005 ABC transporter L2D31_04895 PF17912 MalK OB fold domain L2D31_04895 PF03459 TOBE domain L2D31_04900 PF13556 PucR C-terminal helix-turn-helix domain L2D31_04905 PF17277 Family of unknown function (DUF5342) L2D31_04910 PF14398 YheC/D like ATP-grasp L2D31_04915 PF14398 YheC/D like ATP-grasp L2D31_04920 PF04286 Protein of unknown function (DUF445) L2D31_04925 PF06133 Control of competence regulator ComK, YlbF/YmcA L2D31_04935 PF04055 Radical SAM superfamily L2D31_04940 PF13434 L-lysine 6-monooxygenase (NADPH-requiring) L2D31_04945 PF00999 Sodium/hydrogen exchanger family L2D31_04950 PF02080 TrkA-C domain L2D31_04960 PF00378 Enoyl-CoA hydratase/isomerase L2D31_04965 PF14120 YhzD-like protein L2D31_04970 PF00149 Calcineurin-like phosphoesterase L2D31_04975 PF13514 AAA domain L2D31_04980 PF01966 HD domain L2D31_04985 PF14147 Sporulation protein YhaL L2D31_04995 PF09680 Family of unknown function L2D31_05000 PF09680 Family of unknown function L2D31_05010 PF11667 Putative zincin peptidase L2D31_05015 PF08963 Protein of unknown function (DUF1878) L2D31_05020 PF01047 MarR family L2D31_05025 PF12732 YtxH-like protein L2D31_05035 PF17099 Tryptophan transporter TrpP L2D31_05040 PF00266 Aminotransferase class-V L2D31_05045 PF01230 HIT domain L2D31_05050 PF00005 ABC transporter L2D31_05055 PF05975 Bacterial ABC transporter protein EcsB L2D31_05060 PF12787 EcsC protein family L2D31_05065 PF01546 Peptidase family M20/M25/M40 L2D31_05065 PF07687 Peptidase dimerisation domain L2D31_05075 PF03992 Antibiotic biosynthesis monooxygenase L2D31_05080 PF00905 Penicillin binding protein transpeptidase domain L2D31_05080 PF00912 Transglycosylase L2D31_05085 PF01208 Uroporphyrinogen decarboxylase (URO-D) L2D31_05090 PF00762 Ferrochelatase L2D31_05095 PF01593 Flavin containing amine oxidoreductase L2D31_05100 PF17932 Tetracyclin repressor-like, C-terminal domain L2D31_05100 PF00440 Bacterial regulatory proteins, tetR family L2D31_05110 PF05343 M42 glutamyl aminopeptidase L2D31_05115 PF00375 Sodium:dicarboxylate symporter family L2D31_05120 PF14149 YhfH-like protein L2D31_05125 PF12706 Beta-lactamase superfamily domain L2D31_05130 PF03099 Biotin/lipoate A/B protein ligase family L2D31_05130 PF10437 Bacterial lipoate protein ligase C-terminus L2D31_05135 PF00501 AMP-binding enzyme L2D31_05135 PF13193 AMP-binding enzyme C-terminal domain L2D31_05145 PF16491 CAAX prenyl protease N-terminal, five membrane helices L2D31_05145 PF01435 Peptidase family M48 L2D31_05150 PF05922 Peptidase inhibitor I9 L2D31_05150 PF00082 Subtilase family L2D31_05155 PF00300 Histidine phosphatase superfamily (branch 1) L2D31_05160 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain L2D31_05165 PF00355 Rieske [2Fe-2S] domain L2D31_05165 PF01266 FAD dependent oxidoreductase L2D31_05175 PF08858 IDEAL domain L2D31_05180 PF06338 ComK protein L2D31_05185 PF01168 Alanine racemase, N-terminal domain L2D31_05185 PF14031 Putative serine dehydratase domain L2D31_05195 PF00392 Bacterial regulatory proteins, gntR family L2D31_05195 PF00155 Aminotransferase class I and II L2D31_05200 PF07690 Major Facilitator Superfamily L2D31_05205 PF01337 Barstar (barnase inhibitor) L2D31_05210 PF01032 FecCD transport family L2D31_05215 PF01032 FecCD transport family L2D31_05220 PF00005 ABC transporter L2D31_05225 PF01497 Periplasmic binding protein L2D31_05230 PF03816 Cell envelope-related transcriptional attenuator domain L2D31_05245 PF09335 SNARE associated Golgi protein L2D31_05250 PF10502 Signal peptidase, peptidase S26 L2D31_05255 PF05145 Transition state regulatory protein AbrB L2D31_05270 PF07681 DoxX L2D31_05275 PF02915 Rubrerythrin L2D31_05280 PF12705 PD-(D/E)XK nuclease superfamily L2D31_05285 PF12705 PD-(D/E)XK nuclease superfamily L2D31_05285 PF13361 UvrD-like helicase C-terminal domain L2D31_05285 PF00580 UvrD/REP helicase N-terminal domain L2D31_05290 PF12320 Type 5 capsule protein repressor C-terminal domain L2D31_05290 PF00149 Calcineurin-like phosphoesterase L2D31_05295 PF13476 AAA domain L2D31_05305 PF10676 Spore germination protein gerPA/gerPF L2D31_05310 PF10970 Spore germination protein GerPE L2D31_05320 PF10737 Spore germination protein GerPC L2D31_05325 PF10803 Spore germination GerPB L2D31_05330 PF10676 Spore germination protein gerPA/gerPF L2D31_05340 PF08757 CotH kinase protein L2D31_05345 PF01557 Fumarylacetoacetate (FAA) hydrolase family L2D31_05350 PF07457 Protein of unknown function (DUF1516) L2D31_05355 PF10949 Protein of unknown function (DUF2777) L2D31_05360 PF00733 Asparagine synthase L2D31_05360 PF13537 Glutamine amidotransferase domain L2D31_05365 PF01593 Flavin containing amine oxidoreductase L2D31_05370 PF01593 Flavin containing amine oxidoreductase L2D31_05380 PF01554 MatE L2D31_05385 PF12833 Helix-turn-helix domain L2D31_05385 PF02311 AraC-like ligand binding domain L2D31_05405 PF00202 Aminotransferase class-III L2D31_05410 PF00282 Pyridoxal-dependent decarboxylase conserved domain L2D31_05415 PF04183 IucA / IucC family L2D31_05415 PF06276 Ferric iron reductase FhuF-like transporter L2D31_05425 PF13434 L-lysine 6-monooxygenase (NADPH-requiring) L2D31_05445 PF02607 B12 binding domain L2D31_05445 PF02965 Vitamin B12 dependent methionine synthase, activation domain L2D31_05445 PF00809 Pterin binding enzyme L2D31_05445 PF02310 B12 binding domain L2D31_05445 PF02574 Homocysteine S-methyltransferase L2D31_05450 PF02219 Methylenetetrahydrofolate reductase L2D31_05450 PF02574 Homocysteine S-methyltransferase L2D31_05455 PF04461 Protein of unknown function (DUF520) L2D31_05460 PF17783 CvfB-like winged helix domain L2D31_05460 PF13509 S1 domain L2D31_05465 PF02608 ABC transporter substrate-binding protein PnrA-like L2D31_05470 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain L2D31_05470 PF00672 HAMP domain L2D31_05470 PF02743 Cache domain L2D31_05475 PF02645 Uncharacterised protein, DegV family COG1307 L2D31_05480 PF10035 Uncharacterized protein conserved in bacteria (DUF2179) L2D31_05480 PF02588 Uncharacterised 5xTM membrane BCR, YitT family COG1284 L2D31_05485 PF12690 Intracellular proteinase inhibitor L2D31_05490 PF12758 Protein of unknown function (DUF3813) L2D31_05505 PF00326 Prolyl oligopeptidase family L2D31_05510 PF01883 Iron-sulfur cluster assembly protein L2D31_05515 PF01565 FAD binding domain L2D31_05520 PF07690 Major Facilitator Superfamily L2D31_05525 PF02774 Semialdehyde dehydrogenase, dimerisation domain L2D31_05525 PF01118 Semialdehyde dehydrogenase, NAD binding domain L2D31_05530 PF01960 ArgJ family L2D31_05535 PF00696 Amino acid kinase family L2D31_05540 PF00202 Aminotransferase class-III L2D31_05545 PF00988 Carbamoyl-phosphate synthase small chain, CPSase domain L2D31_05545 PF00117 Glutamine amidotransferase class-I L2D31_05550 PF02787 Carbamoyl-phosphate synthetase large chain, oligomerisation domain L2D31_05550 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain L2D31_05555 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain L2D31_05555 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain L2D31_05560 PF14168 YjzC-like protein L2D31_05565 PF07690 Major Facilitator Superfamily L2D31_05570 PF11151 Protein of unknown function (DUF2929) L2D31_05585 PF02608 ABC transporter substrate-binding protein PnrA-like L2D31_05590 PF10815 ComZ L2D31_05600 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III L2D31_05600 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal L2D31_05605 PF00109 Beta-ketoacyl synthase, N-terminal domain L2D31_05605 PF02801 Beta-ketoacyl synthase, C-terminal domain L2D31_05610 PF10026 Predicted Zn-dependent protease (DUF2268) L2D31_05615 PF00005 ABC transporter L2D31_05615 PF08352 Oligopeptide/dipeptide transporter, C-terminal region L2D31_05620 PF08352 Oligopeptide/dipeptide transporter, C-terminal region L2D31_05620 PF00005 ABC transporter L2D31_05625 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle L2D31_05630 PF00528 Binding-protein-dependent transport system inner membrane component L2D31_05635 PF00528 Binding-protein-dependent transport system inner membrane component L2D31_05635 PF12911 N-terminal TM domain of oligopeptide transport permease C L2D31_05640 PF12227 Protein of unknown function (DUF3603) L2D31_05645 PF00579 tRNA synthetases class I (W and Y) L2D31_05655 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle L2D31_05660 PF00528 Binding-protein-dependent transport system inner membrane component L2D31_05665 PF00528 Binding-protein-dependent transport system inner membrane component L2D31_05665 PF12911 N-terminal TM domain of oligopeptide transport permease C L2D31_05670 PF00005 ABC transporter L2D31_05670 PF08352 Oligopeptide/dipeptide transporter, C-terminal region L2D31_05675 PF08352 Oligopeptide/dipeptide transporter, C-terminal region L2D31_05675 PF00005 ABC transporter L2D31_05685 PF13508 Acetyltransferase (GNAT) domain L2D31_05690 PF03960 ArsC family L2D31_05695 PF03741 Integral membrane protein TerC family L2D31_05700 PF05389 Negative regulator of genetic competence (MecA) L2D31_05705 PF13396 Phospholipase_D-nuclease N-terminal L2D31_05705 PF13091 PLD-like domain L2D31_05710 PF06054 Competence protein CoiA-like family L2D31_05715 PF01432 Peptidase family M3 L2D31_05715 PF08439 Oligopeptidase F L2D31_05730 PF01152 Bacterial-like globin L2D31_05735 PF01464 Transglycosylase SLT domain L2D31_05740 PF01928 CYTH domain L2D31_05750 PF04607 Region found in RelA / SpoT proteins L2D31_05755 PF01513 ATP-NAD kinase L2D31_05760 PF00849 RNA pseudouridylate synthase L2D31_05765 PF00149 Calcineurin-like phosphoesterase L2D31_05770 PF02080 TrkA-C domain L2D31_05770 PF02254 TrkA-N domain L2D31_05770 PF00999 Sodium/hydrogen exchanger family L2D31_05775 PF03070 TENA/THI-4/PQQC family L2D31_05780 PF02581 Thiamine monophosphate synthase L2D31_05785 PF01266 FAD dependent oxidoreductase L2D31_05790 PF02597 ThiS family L2D31_05795 PF05690 Thiazole biosynthesis protein ThiG L2D31_05800 PF00899 ThiF family L2D31_05805 PF08543 Phosphomethylpyrimidine kinase L2D31_05815 PF14153 Spore coat protein CotO L2D31_05820 PF10612 Spore coat protein Z L2D31_05825 PF10612 Spore coat protein Z L2D31_05830 PF07552 Spore Coat Protein X and V domain L2D31_05840 PF07552 Spore Coat Protein X and V domain L2D31_05845 PF07098 Protein of unknown function (DUF1360) L2D31_05860 PF14069 Stage VI sporulation protein F L2D31_05865 PF00580 UvrD/REP helicase N-terminal domain L2D31_05865 PF13361 UvrD-like helicase C-terminal domain L2D31_05875 PF13673 Acetyltransferase (GNAT) domain L2D31_05885 PF00756 Putative esterase L2D31_05890 PF01053 Cys/Met metabolism PLP-dependent enzyme L2D31_05895 PF01053 Cys/Met metabolism PLP-dependent enzyme L2D31_05920 PF03255 Acetyl co-enzyme A carboxylase carboxyltransferase alpha subunit L2D31_05940 PF07690 Major Facilitator Superfamily L2D31_05945 PF00701 Dihydrodipicolinate synthetase family L2D31_05950 PF03466 LysR substrate binding domain L2D31_05950 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family L2D31_05960 PF06713 Bacterial PH domain L2D31_05965 PF00302 Chloramphenicol acetyltransferase L2D31_05970 PF18801 response regulator aspartate phosphatase H, N terminal L2D31_05970 PF13176 Tetratricopeptide repeat L2D31_05985 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family L2D31_05985 PF03466 LysR substrate binding domain L2D31_05990 PF01177 Asp/Glu/Hydantoin racemase L2D31_06005 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family L2D31_06005 PF03466 LysR substrate binding domain L2D31_06010 PF07690 Major Facilitator Superfamily L2D31_06015 PF07992 Pyridine nucleotide-disulphide oxidoreductase L2D31_06015 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain L2D31_06040 PF00842 Alanine racemase, C-terminal domain L2D31_06040 PF01168 Alanine racemase, N-terminal domain L2D31_06045 PF08240 Alcohol dehydrogenase GroES-like domain L2D31_06045 PF00107 Zinc-binding dehydrogenase L2D31_06050 PF00440 Bacterial regulatory proteins, tetR family L2D31_06065 PF00700 Bacterial flagellin C-terminal helical region L2D31_06065 PF00669 Bacterial flagellin N-terminal helical region L2D31_06070 PF00700 Bacterial flagellin C-terminal helical region L2D31_06070 PF00669 Bacterial flagellin N-terminal helical region L2D31_06075 PF01494 FAD binding domain L2D31_06090 PF05908 Poly-gamma-glutamate hydrolase L2D31_06095 PF06114 IrrE N-terminal-like domain L2D31_06100 PF01471 Putative peptidoglycan binding domain L2D31_06100 PF01510 N-acetylmuramoyl-L-alanine amidase L2D31_06100 PF01476 LysM domain L2D31_06105 PF14185 Antitoxin SpoIISB, type II toxin-antitoxin system L2D31_06110 PF14171 Toxin SpoIISA, type II toxin-antitoxin system L2D31_06115 PF01384 Phosphate transporter family L2D31_06120 PF01865 Protein of unknown function DUF47 L2D31_06140 PF00528 Binding-protein-dependent transport system inner membrane component L2D31_06145 PF00528 Binding-protein-dependent transport system inner membrane component L2D31_06160 PF03611 PTS system sugar-specific permease component L2D31_06175 PF00107 Zinc-binding dehydrogenase L2D31_06175 PF08240 Alcohol dehydrogenase GroES-like domain L2D31_06180 PF00676 Dehydrogenase E1 component L2D31_06185 PF00364 Biotin-requiring enzyme L2D31_06185 PF02779 Transketolase, pyrimidine binding domain L2D31_06185 PF02780 Transketolase, C-terminal domain L2D31_06190 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) L2D31_06190 PF00364 Biotin-requiring enzyme L2D31_06190 PF02817 e3 binding domain L2D31_06195 PF07992 Pyridine nucleotide-disulphide oxidoreductase L2D31_06195 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain L2D31_06210 PF04198 Putative sugar-binding domain L2D31_06220 PF13520 Amino acid permease L2D31_06225 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily L2D31_06230 PF13180 PDZ domain L2D31_06235 PF03807 NADP oxidoreductase coenzyme F420-dependent L2D31_06235 PF14748 Pyrroline-5-carboxylate reductase dimerisation L2D31_06240 PF04951 D-aminopeptidase L2D31_06245 PF00528 Binding-protein-dependent transport system inner membrane component L2D31_06250 PF00528 Binding-protein-dependent transport system inner membrane component L2D31_06250 PF12911 N-terminal TM domain of oligopeptide transport permease C L2D31_06255 PF08352 Oligopeptide/dipeptide transporter, C-terminal region L2D31_06255 PF00005 ABC transporter L2D31_06260 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle L2D31_06265 PF02016 LD-carboxypeptidase N-terminal domain L2D31_06265 PF17676 LD-carboxypeptidase C-terminal domain L2D31_06270 PF13378 Enolase C-terminal domain-like L2D31_06270 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain L2D31_06275 PF00877 NlpC/P60 family L2D31_06280 PF08352 Oligopeptide/dipeptide transporter, C-terminal region L2D31_06280 PF00005 ABC transporter L2D31_06290 PF03061 Thioesterase superfamily L2D31_06295 PF03551 Transcriptional regulator PadR-like family L2D31_06310 PF13302 Acetyltransferase (GNAT) domain L2D31_06315 PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain L2D31_06315 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain L2D31_06315 PF12833 Helix-turn-helix domain L2D31_06315 PF02805 Metal binding domain of Ada L2D31_06320 PF00893 Small Multidrug Resistance protein L2D31_06325 PF00893 Small Multidrug Resistance protein L2D31_06335 PF01842 ACT domain L2D31_06335 PF00551 Formyl transferase L2D31_06340 PF00696 Amino acid kinase family L2D31_06340 PF01472 PUA domain L2D31_06345 PF00171 Aldehyde dehydrogenase family L2D31_06350 PF18801 response regulator aspartate phosphatase H, N terminal L2D31_06360 PF02566 OsmC-like protein L2D31_06365 PF01047 MarR family L2D31_06370 PF02566 OsmC-like protein L2D31_06375 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region L2D31_06380 PF08267 Cobalamin-independent synthase, N-terminal domain L2D31_06380 PF01717 Cobalamin-independent synthase, Catalytic domain L2D31_06385 PF00082 Subtilase family L2D31_06400 PF00486 Transcriptional regulatory protein, C terminal L2D31_06400 PF00072 Response regulator receiver domain L2D31_06405 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase L2D31_06405 PF00512 His Kinase A (phospho-acceptor) domain L2D31_06405 PF00672 HAMP domain L2D31_06410 PF03413 Peptidase propeptide and YPEB domain L2D31_06415 PF03413 Peptidase propeptide and YPEB domain L2D31_06425 PF00571 CBS domain L2D31_06425 PF01769 Divalent cation transporter L2D31_06425 PF03448 MgtE intracellular N domain L2D31_06435 PF03466 LysR substrate binding domain L2D31_06435 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family L2D31_06445 PF13411 MerR HTH family regulatory protein L2D31_06460 PF01047 MarR family L2D31_06465 PF00990 Diguanylate cyclase, GGDEF domain L2D31_06465 PF00563 EAL domain L2D31_06465 PF03707 Bacterial signalling protein N terminal repeat L2D31_06470 PF09335 SNARE associated Golgi protein L2D31_06475 PF03741 Integral membrane protein TerC family L2D31_06480 PF04542 Sigma-70 region 2 L2D31_06485 PF12791 Anti-sigma factor N-terminus L2D31_06490 PF00269 Small, acid-soluble spore proteins, alpha/beta type L2D31_06495 PF08876 Domain of unknown function (DUF1836) L2D31_06500 PF01435 Peptidase family M48 L2D31_06505 PF02386 Cation transport protein L2D31_06510 PF04239 Protein of unknown function (DUF421) L2D31_06525 PF01757 Acyltransferase family L2D31_06530 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase L2D31_06530 PF00989 PAS fold L2D31_06530 PF00512 His Kinase A (phospho-acceptor) domain L2D31_06530 PF13188 PAS domain L2D31_06530 PF13426 PAS domain L2D31_06535 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain L2D31_06535 PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain L2D31_06540 PF01008 Initiation factor 2 subunit family L2D31_06545 PF01636 Phosphotransferase enzyme family L2D31_06550 PF00155 Aminotransferase class I and II L2D31_06555 PF02788 Ribulose bisphosphate carboxylase large chain, N-terminal domain L2D31_06555 PF00016 Ribulose bisphosphate carboxylase large chain, catalytic domain L2D31_06565 PF00596 Class II Aldolase and Adducin N-terminal domain L2D31_06570 PF03079 ARD/ARD' family L2D31_06575 PF09388 Spo0E like sporulation regulatory protein L2D31_06580 PF02743 Cache domain L2D31_06580 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase L2D31_06580 PF00512 His Kinase A (phospho-acceptor) domain L2D31_06585 PF01047 MarR family L2D31_06590 PF13677 Membrane MotB of proton-channel complex MotA/MotB L2D31_06590 PF00691 OmpA family L2D31_06595 PF01618 MotA/TolQ/ExbB proton channel family L2D31_06600 PF07724 AAA domain (Cdc48 subfamily) L2D31_06600 PF17871 AAA lid domain L2D31_06600 PF10431 C-terminal, D2-small domain, of ClpB protein L2D31_06600 PF00004 ATPase family associated with various cellular activities (AAA) L2D31_06610 PF06508 Queuosine biosynthesis protein QueC L2D31_06615 PF01242 6-pyruvoyl tetrahydropterin synthase L2D31_06620 PF04055 Radical SAM superfamily L2D31_06625 PF14489 QueF-like protein L2D31_06635 PF13302 Acetyltransferase (GNAT) domain L2D31_06640 PF09953 Uncharacterized protein conserved in bacteria (DUF2187) L2D31_06650 PF07486 Cell Wall Hydrolase L2D31_06655 PF01943 Polysaccharide biosynthesis protein L2D31_06660 PF00578 AhpC/TSA family L2D31_06670 PF01321 Creatinase/Prolidase N-terminal domain L2D31_06670 PF00557 Metallopeptidase family M24 L2D31_06675 PF00356 Bacterial regulatory proteins, lacI family L2D31_06675 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family L2D31_06680 PF03123 CAT RNA binding domain L2D31_06680 PF00874 PRD domain L2D31_06685 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 L2D31_06685 PF00367 phosphotransferase system, EIIB L2D31_06685 PF02378 Phosphotransferase system, EIIC L2D31_06690 PF00381 PTS HPr component phosphorylation site L2D31_06695 PF05524 PEP-utilising enzyme, N-terminal L2D31_06695 PF00391 PEP-utilising enzyme, mobile domain L2D31_06695 PF02896 PEP-utilising enzyme, TIM barrel domain L2D31_06700 PF11132 Transcriptional regulator protein (SplA) L2D31_06710 PF02743 Cache domain L2D31_06710 PF00672 HAMP domain L2D31_06710 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain L2D31_06715 PF00106 short chain dehydrogenase L2D31_06720 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase L2D31_06720 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase L2D31_06725 PF00188 Cysteine-rich secretory protein family L2D31_06730 PF03717 Penicillin-binding Protein dimerisation domain L2D31_06730 PF00905 Penicillin binding protein transpeptidase domain L2D31_06735 PF00512 His Kinase A (phospho-acceptor) domain L2D31_06735 PF00989 PAS fold L2D31_06735 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase L2D31_06735 PF08447 PAS fold L2D31_06740 PF00155 Aminotransferase class I and II L2D31_06745 PF01545 Cation efflux family L2D31_06745 PF16916 Dimerisation domain of Zinc Transporter L2D31_06755 PF06271 RDD family L2D31_06765 PF01584 CheW-like domain L2D31_06765 PF00072 Response regulator receiver domain L2D31_06770 PF14177 YkyB-like protein L2D31_06790 PF07690 Major Facilitator Superfamily L2D31_06795 PF01476 LysM domain L2D31_06795 PF03734 L,D-transpeptidase catalytic domain L2D31_06800 PF10518 TAT (twin-arginine translocation) pathway signal sequence L2D31_06800 PF00149 Calcineurin-like phosphoesterase L2D31_06810 PF00563 EAL domain L2D31_06810 PF10388 EAL-domain associated signalling protein domain L2D31_06815 PF05067 Manganese containing catalase L2D31_06820 PF08796 Protein of unknown function (DUF1797) L2D31_06825 PF04308 Ribonuclease H-like L2D31_06830 PF14156 Antirepressor AbbA L2D31_06840 PF03466 LysR substrate binding domain L2D31_06840 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family L2D31_06850 PF00258 Flavodoxin L2D31_06860 PF00258 Flavodoxin L2D31_06865 PF08503 Tetrahydrodipicolinate succinyltransferase N-terminal L2D31_06865 PF00132 Bacterial transferase hexapeptide (six repeats) L2D31_06865 PF14602 Hexapeptide repeat of succinyl-transferase L2D31_06870 PF07687 Peptidase dimerisation domain L2D31_06870 PF01546 Peptidase family M20/M25/M40 L2D31_06875 PF03698 Uncharacterised protein family (UPF0180) L2D31_06880 PF00924 Mechanosensitive ion channel L2D31_06885 PF10417 C-terminal domain of 1-Cys peroxiredoxin L2D31_06885 PF00578 AhpC/TSA family L2D31_06890 PF00578 AhpC/TSA family L2D31_06905 PF12804 MobA-like NTP transferase domain L2D31_06910 PF00899 ThiF family L2D31_06915 PF00994 Probable molybdopterin binding domain L2D31_06915 PF03454 MoeA C-terminal region (domain IV) L2D31_06915 PF03453 MoeA N-terminal region (domain I and II) L2D31_06920 PF03205 Molybdopterin guanine dinucleotide synthesis protein B L2D31_06925 PF02391 MoaE protein L2D31_06930 PF02597 ThiS family L2D31_06945 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion L2D31_06950 PF00005 ABC transporter L2D31_06955 PF12704 MacB-like periplasmic core domain L2D31_06955 PF02687 FtsX-like permease family L2D31_06960 PF00455 DeoR C terminal sensor domain L2D31_06960 PF08220 DeoR-like helix-turn-helix domain L2D31_06965 PF00294 pfkB family carbohydrate kinase L2D31_06970 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 L2D31_06970 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit L2D31_06975 PF10502 Signal peptidase, peptidase S26 L2D31_06985 PF00005 ABC transporter L2D31_06985 PF12848 ABC transporter L2D31_06990 PF02073 Thermophilic metalloprotease (M29) L2D31_06995 PF17447 Uncharacterized YkpC-like L2D31_07005 PF04014 Antidote-toxin recognition MazE, bacterial antitoxin L2D31_07005 PF18277 AbrB C-terminal domain L2D31_07010 PF00989 PAS fold L2D31_07010 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase L2D31_07010 PF00512 His Kinase A (phospho-acceptor) domain L2D31_07015 PF06094 Gamma-glutamyl cyclotransferase, AIG2-like L2D31_07020 PF02254 TrkA-N domain L2D31_07020 PF02080 TrkA-C domain L2D31_07025 PF13382 Adenine deaminase C-terminal domain L2D31_07025 PF01979 Amidohydrolase family L2D31_07030 PF07521 Zn-dependent metallo-hydrolase RNA specificity domain L2D31_07030 PF17770 Ribonuclease J C-terminal domain L2D31_07030 PF00753 Metallo-beta-lactamase superfamily L2D31_07035 PF07288 Protein of unknown function (DUF1447) L2D31_07045 PF01327 Polypeptide deformylase L2D31_07060 PF00676 Dehydrogenase E1 component L2D31_07065 PF02779 Transketolase, pyrimidine binding domain L2D31_07065 PF02780 Transketolase, C-terminal domain L2D31_07070 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) L2D31_07070 PF00364 Biotin-requiring enzyme L2D31_07070 PF02817 e3 binding domain L2D31_07075 PF07992 Pyridine nucleotide-disulphide oxidoreductase L2D31_07075 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain L2D31_07085 PF13790 SR1 protein L2D31_07090 PF01276 Orn/Lys/Arg decarboxylase, major domain L2D31_07090 PF03711 Orn/Lys/Arg decarboxylase, C-terminal domain L2D31_07095 PF05256 Uncharacterised protein family (UPF0223) L2D31_07100 PF06335 Protein of unknown function (DUF1054) L2D31_07110 PF00459 Inositol monophosphatase family L2D31_07125 PF04542 Sigma-70 region 2 L2D31_07125 PF08281 Sigma-70, region 4 L2D31_07130 PF13490 Putative zinc-finger L2D31_07145 PF00679 Elongation factor G C-terminus L2D31_07145 PF14492 Elongation Factor G, domain II L2D31_07145 PF00009 Elongation factor Tu GTP binding domain L2D31_07145 PF03144 Elongation factor Tu domain 2 L2D31_07150 PF14036 YlaH-like protein L2D31_07155 PF09963 Uncharacterized protein conserved in bacteria (DUF2197) L2D31_07160 PF09580 Sporulation lipoprotein YhcN/YlaJ (Spore_YhcN_YlaJ) L2D31_07165 PF02562 PhoH-like protein L2D31_07165 PF13638 PIN domain L2D31_07175 PF04960 Glutaminase L2D31_07180 PF07408 Protein of unknown function (DUF1507) L2D31_07185 PF01098 Cell cycle protein L2D31_07190 PF00289 Biotin carboxylase, N-terminal domain L2D31_07190 PF00364 Biotin-requiring enzyme L2D31_07190 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain L2D31_07190 PF00682 HMGL-like L2D31_07190 PF02436 Conserved carboxylase domain L2D31_07190 PF02785 Biotin carboxylase C-terminal domain L2D31_07195 PF00875 DNA photolyase L2D31_07195 PF03441 FAD binding domain of DNA photolyase L2D31_07200 PF02628 Cytochrome oxidase assembly protein L2D31_07205 PF01040 UbiA prenyltransferase family L2D31_07210 PF02790 Cytochrome C oxidase subunit II, transmembrane domain L2D31_07210 PF00034 Cytochrome c L2D31_07210 PF00116 Cytochrome C oxidase subunit II, periplasmic domain L2D31_07215 PF00115 Cytochrome C and Quinol oxidase polypeptide I L2D31_07220 PF00510 Cytochrome c oxidase subunit III L2D31_07225 PF03626 Prokaryotic Cytochrome C oxidase subunit IV L2D31_07230 PF09678 Cytochrome c oxidase caa3 assembly factor (Caa3_CtaG) L2D31_07235 PF08868 YugN-like family L2D31_07240 PF00571 CBS domain L2D31_07245 PF00188 Cysteine-rich secretory protein family L2D31_07245 PF14504 CAP-associated N-terminal L2D31_07250 PF14071 Putative coat protein L2D31_07255 PF14003 YlbE-like protein L2D31_07265 PF06133 Control of competence regulator ComK, YlbF/YmcA L2D31_07270 PF09902 Uncharacterized protein conserved in bacteria (DUF2129) L2D31_07280 PF01467 Cytidylyltransferase-like L2D31_07285 PF07670 Nucleoside recognition L2D31_07290 PF01734 Patatin-like phospholipase L2D31_07295 PF05362 Lon protease (S16) C-terminal proteolytic domain L2D31_07295 PF13180 PDZ domain L2D31_07300 PF05636 HIGH Nucleotidyl Transferase L2D31_07305 PF02620 Large ribosomal RNA subunit accumulation protein YceD L2D31_07310 PF01783 Ribosomal L32p protein family L2D31_07320 PF00583 Acetyltransferase (GNAT) family L2D31_07325 PF08546 Ketopantoate reductase PanE/ApbA C terminal L2D31_07325 PF02558 Ketopantoate reductase PanE/ApbA L2D31_07330 PF10079 Bacillithiol biosynthesis BshC L2D31_07335 PF02381 MraZ protein, putative antitoxin-like L2D31_07340 PF01795 MraW methylase family L2D31_07350 PF03793 PASTA domain L2D31_07350 PF03717 Penicillin-binding Protein dimerisation domain L2D31_07350 PF00905 Penicillin binding protein transpeptidase domain L2D31_07355 PF03793 PASTA domain L2D31_07355 PF03717 Penicillin-binding Protein dimerisation domain L2D31_07355 PF00905 Penicillin binding protein transpeptidase domain L2D31_07360 PF08245 Mur ligase middle domain L2D31_07360 PF01225 Mur ligase family, catalytic domain L2D31_07360 PF02875 Mur ligase family, glutamate ligase domain L2D31_07365 PF00953 Glycosyl transferase family 4 L2D31_07365 PF10555 Phospho-N-acetylmuramoyl-pentapeptide-transferase signature 1 L2D31_07370 PF02875 Mur ligase family, glutamate ligase domain L2D31_07370 PF08245 Mur ligase middle domain L2D31_07375 PF01098 Cell cycle protein L2D31_07380 PF04101 Glycosyltransferase family 28 C-terminal domain L2D31_07380 PF03033 Glycosyltransferase family 28 N-terminal domain L2D31_07385 PF02873 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain L2D31_07385 PF01565 FAD binding domain L2D31_07390 PF08478 POTRA domain, FtsQ-type L2D31_07395 PF05949 Bacterial protein of unknown function (DUF881) L2D31_07400 PF05949 Bacterial protein of unknown function (DUF881) L2D31_07405 PF06947 Protein of unknown function (DUF1290) L2D31_07410 PF02491 SHS2 domain inserted in FTSA L2D31_07415 PF12327 FtsZ family, C-terminal domain L2D31_07415 PF00091 Tubulin/FtsZ family, GTPase domain L2D31_07420 PF05922 Peptidase inhibitor I9 L2D31_07420 PF00082 Subtilase family L2D31_07425 PF03419 Sporulation factor SpoIIGA L2D31_07430 PF04542 Sigma-70 region 2 L2D31_07430 PF04545 Sigma-70, region 4 L2D31_07435 PF04542 Sigma-70 region 2 L2D31_07435 PF04539 Sigma-70 region 3 L2D31_07435 PF04545 Sigma-70, region 4 L2D31_07440 PF04198 Putative sugar-binding domain L2D31_07455 PF03608 PTS system enzyme II sorbitol-specific factor L2D31_07460 PF07663 Sorbitol phosphotransferase enzyme II C-terminus L2D31_07460 PF03612 Sorbitol phosphotransferase enzyme II N-terminus L2D31_07465 PF03829 PTS system glucitol/sorbitol-specific IIA component L2D31_07470 PF00005 ABC transporter L2D31_07475 PF05239 PRC-barrel domain L2D31_07480 PF02578 Multi-copper polyphenol oxidoreductase laccase L2D31_07485 PF01168 Alanine racemase, N-terminal domain L2D31_07490 PF04472 Cell division protein SepF L2D31_07495 PF02325 YGGT family L2D31_07500 PF01479 S4 domain L2D31_07500 PF17774 Putative RNA-binding domain in YlmH L2D31_07505 PF05103 DivIVA protein L2D31_07510 PF08264 Anticodon-binding domain of tRNA L2D31_07510 PF00133 tRNA synthetases class I (I, L, M and V) L2D31_07515 PF01258 Prokaryotic dksA/traR C4-type zinc finger L2D31_07520 PF01252 Signal peptidase (SPase) II L2D31_07525 PF00849 RNA pseudouridylate synthase L2D31_07525 PF01479 S4 domain L2D31_07530 PF00156 Phosphoribosyl transferase domain L2D31_07535 PF00860 Permease family L2D31_07540 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain L2D31_07540 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain L2D31_07545 PF01979 Amidohydrolase family L2D31_07550 PF00988 Carbamoyl-phosphate synthase small chain, CPSase domain L2D31_07550 PF00117 Glutamine amidotransferase class-I L2D31_07555 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain L2D31_07555 PF02787 Carbamoyl-phosphate synthetase large chain, oligomerisation domain L2D31_07555 PF02142 MGS-like domain L2D31_07560 PF10418 Iron-sulfur cluster binding domain of dihydroorotate dehydrogenase B L2D31_07565 PF01180 Dihydroorotate dehydrogenase L2D31_07570 PF00215 Orotidine 5'-phosphate decarboxylase / HUMPS family L2D31_07575 PF00156 Phosphoribosyl transferase domain L2D31_07585 PF01507 Phosphoadenosine phosphosulfate reductase family L2D31_07590 PF01384 Phosphate transporter family L2D31_07595 PF01747 ATP-sulfurylase L2D31_07595 PF14306 PUA-like domain L2D31_07605 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases L2D31_07610 PF01903 CbiX L2D31_07620 PF05670 NFACT protein RNA binding domain L2D31_07625 PF00689 Cation transporting ATPase, C-terminus L2D31_07625 PF00690 Cation transporter/ATPase, N-terminus L2D31_07630 PF08340 Domain of unknown function (DUF1732) L2D31_07630 PF03755 YicC-like family, N-terminal region L2D31_07635 PF04025 Domain of unknown function (DUF370) L2D31_07640 PF00625 Guanylate kinase L2D31_07645 PF01192 RNA polymerase Rpb6 L2D31_07650 PF04127 DNA / pantothenate metabolism flavoprotein L2D31_07650 PF02441 Flavoprotein L2D31_07655 PF17764 3′ DNA-binding domain (3′BD) L2D31_07655 PF18074 Primosomal protein N C-terminal domain L2D31_07655 PF18319 PriA DNA helicase Cys-rich region (CRR) domain L2D31_07655 PF04851 Type III restriction enzyme, res subunit L2D31_07655 PF00271 Helicase conserved C-terminal domain L2D31_07660 PF01327 Polypeptide deformylase L2D31_07665 PF00551 Formyl transferase L2D31_07665 PF02911 Formyl transferase, C-terminal domain L2D31_07670 PF01029 NusB family L2D31_07670 PF01189 16S rRNA methyltransferase RsmB/F L2D31_07675 PF04055 Radical SAM superfamily L2D31_07685 PF03793 PASTA domain L2D31_07685 PF00069 Protein kinase domain L2D31_07690 PF03193 RsgA GTPase L2D31_07690 PF16745 RsgA N-terminal domain L2D31_07695 PF00834 Ribulose-phosphate 3 epimerase family L2D31_07700 PF04265 Thiamin pyrophosphokinase, vitamin B1 binding domain L2D31_07700 PF04263 Thiamin pyrophosphokinase, catalytic domain L2D31_07705 PF08183 Stage V sporulation protein family L2D31_07710 PF00830 Ribosomal L28 family L2D31_07715 PF03780 Asp23 family, cell envelope-related function L2D31_07720 PF02734 DAK2 domain L2D31_07720 PF13684 Dihydroxyacetone kinase family L2D31_07725 PF01842 ACT domain L2D31_07725 PF03315 Serine dehydratase beta chain L2D31_07730 PF03313 Serine dehydratase alpha chain L2D31_07735 PF00270 DEAD/DEAH box helicase L2D31_07735 PF17191 RecG wedge domain L2D31_07735 PF00271 Helicase conserved C-terminal domain L2D31_07745 PF02504 Fatty acid synthesis protein L2D31_07750 PF00698 Acyl transferase domain L2D31_07760 PF00550 Phosphopantetheine attachment site L2D31_07765 PF00035 Double-stranded RNA binding motif L2D31_07765 PF14622 Ribonuclease-III-like L2D31_07770 PF06470 SMC proteins Flexible Hinge Domain L2D31_07770 PF02463 RecF/RecN/SMC N terminal domain L2D31_07775 PF00448 SRP54-type protein, GTPase domain L2D31_07775 PF02881 SRP54-type protein, helical bundle domain L2D31_07780 PF04297 Putative helix-turn-helix protein, YlxM / p13 like L2D31_07785 PF00448 SRP54-type protein, GTPase domain L2D31_07785 PF02978 Signal peptide binding domain L2D31_07785 PF02881 SRP54-type protein, helical bundle domain L2D31_07790 PF00886 Ribosomal protein S16 L2D31_07800 PF11068 YlqD protein L2D31_07805 PF05239 PRC-barrel domain L2D31_07805 PF01782 RimM N-terminal domain L2D31_07810 PF01746 tRNA (Guanine-1)-methyltransferase L2D31_07815 PF01245 Ribosomal protein L19 L2D31_07820 PF01926 50S ribosome-binding GTPase L2D31_07825 PF01351 Ribonuclease HII L2D31_07835 PF01312 FlhB HrpN YscU SpaS Family L2D31_07840 PF08442 ATP-grasp domain L2D31_07840 PF00549 CoA-ligase L2D31_07845 PF02629 CoA binding domain L2D31_07845 PF00549 CoA-ligase L2D31_07850 PF02481 DNA recombination-mediator protein A L2D31_07855 PF01751 Toprim domain L2D31_07855 PF01131 DNA topoisomerase L2D31_07855 PF01396 Topoisomerase DNA binding C4 zinc finger L2D31_07860 PF01134 Glucose inhibited division protein A L2D31_07865 PF00589 Phage integrase family L2D31_07865 PF02899 Phage integrase, N-terminal SAM-like domain L2D31_07870 PF00227 Proteasome subunit L2D31_07875 PF00004 ATPase family associated with various cellular activities (AAA) L2D31_07875 PF07724 AAA domain (Cdc48 subfamily) L2D31_07875 PF10431 C-terminal, D2-small domain, of ClpB protein L2D31_07880 PF08222 CodY helix-turn-helix domain L2D31_07880 PF06018 CodY GAF-like domain L2D31_07885 PF00460 Flagella basal body rod protein L2D31_07890 PF00460 Flagella basal body rod protein L2D31_07890 PF06429 Flagellar basal body rod FlgEFG protein C-terminal L2D31_07895 PF02049 Flagellar hook-basal body complex protein FliE L2D31_07900 PF01514 Secretory protein of YscJ/FliF family L2D31_07900 PF08345 Flagellar M-ring protein C-terminal L2D31_07905 PF14842 FliG N-terminal domain L2D31_07905 PF14841 FliG middle domain L2D31_07905 PF01706 FliG C-terminal domain L2D31_07910 PF02108 Flagellar assembly protein FliH L2D31_07915 PF18269 T3SS EscN ATPase C-terminal domain L2D31_07915 PF02874 ATP synthase alpha/beta family, beta-barrel domain L2D31_07915 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain L2D31_07920 PF02050 Flagellar FliJ protein L2D31_07925 PF03448 MgtE intracellular N domain L2D31_07930 PF02120 Flagellar hook-length control protein FliK L2D31_07935 PF03963 Flagellar hook capping protein - N-terminal region L2D31_07940 PF06429 Flagellar basal body rod FlgEFG protein C-terminal L2D31_07940 PF00460 Flagella basal body rod protein L2D31_07945 PF06289 Flagellar and Swarming motility proteins L2D31_07950 PF03748 Flagellar basal body-associated protein FliL L2D31_07955 PF02154 Flagellar motor switch protein FliM L2D31_07955 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term L2D31_07960 PF04509 CheC-like family L2D31_07960 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term L2D31_07965 PF00072 Response regulator receiver domain L2D31_07970 PF04347 Flagellar biosynthesis protein, FliO L2D31_07975 PF00813 FliP family L2D31_07980 PF01313 Bacterial export proteins, family 3 L2D31_07985 PF01311 Bacterial export proteins, family 1 L2D31_07990 PF01312 FlhB HrpN YscU SpaS Family L2D31_07995 PF00771 FHIPEP family L2D31_08000 PF00448 SRP54-type protein, GTPase domain L2D31_08005 PF10609 NUBPL iron-transfer P-loop NTPase L2D31_08010 PF00072 Response regulator receiver domain L2D31_08010 PF01339 CheB methylesterase L2D31_08015 PF07194 P2 response regulator binding domain L2D31_08015 PF01584 CheW-like domain L2D31_08015 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase L2D31_08015 PF02895 Signal transducing histidine kinase, homodimeric domain L2D31_08015 PF01627 Hpt domain L2D31_08020 PF01584 CheW-like domain L2D31_08025 PF04509 CheC-like family L2D31_08030 PF03975 CheD chemotactic sensory transduction L2D31_08035 PF04539 Sigma-70 region 3 L2D31_08035 PF04545 Sigma-70, region 4 L2D31_08035 PF04542 Sigma-70 region 2 L2D31_08045 PF00318 Ribosomal protein S2 L2D31_08050 PF00889 Elongation factor TS L2D31_08055 PF00696 Amino acid kinase family L2D31_08060 PF01765 Ribosome recycling factor L2D31_08065 PF01255 Putative undecaprenyl diphosphate synthase L2D31_08075 PF13288 DXP reductoisomerase C-terminal domain L2D31_08075 PF08436 1-deoxy-D-xylulose 5-phosphate reductoisomerase C-terminal domain L2D31_08075 PF02670 1-deoxy-D-xylulose 5-phosphate reductoisomerase L2D31_08080 PF17820 PDZ domain L2D31_08080 PF02163 Peptidase family M50 L2D31_08085 PF03129 Anticodon binding domain L2D31_08085 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) L2D31_08085 PF04073 Aminoacyl-tRNA editing domain L2D31_08090 PF14480 DNA polymerase III polC-type N-terminus I L2D31_08090 PF11490 DNA polymerase III polC-type N-terminus II L2D31_08090 PF17657 Bacterial DNA polymerase III alpha subunit finger domain L2D31_08090 PF14579 Helix-hairpin-helix motif L2D31_08090 PF02811 PHP domain L2D31_08090 PF00929 Exonuclease L2D31_08090 PF07733 Bacterial DNA polymerase III alpha NTPase domain L2D31_08095 PF00942 Cellulose binding domain L2D31_08095 PF00759 Glycosyl hydrolase family 9 L2D31_08100 PF00759 Glycosyl hydrolase family 9 L2D31_08100 PF00942 Cellulose binding domain L2D31_08100 PF02011 Glycosyl hydrolase family 48 L2D31_08105 PF00331 Glycosyl hydrolase family 10 L2D31_08105 PF12791 Anti-sigma factor N-terminus L2D31_08115 PF02576 RimP N-terminal domain L2D31_08115 PF17384 RimP C-terminal SH3 domain L2D31_08120 PF08529 NusA N-terminal domain L2D31_08120 PF13184 NusA-like KH domain L2D31_08120 PF00575 S1 RNA binding domain L2D31_08125 PF04296 Protein of unknown function (DUF448) L2D31_08130 PF01248 Ribosomal protein L7Ae/L30e/S12e/Gadd45 family L2D31_08135 PF11987 Translation-initiation factor 2 L2D31_08135 PF04760 Translation initiation factor IF-2, N-terminal region L2D31_08135 PF00009 Elongation factor Tu GTP binding domain L2D31_08140 PF04456 Protein of unknown function (DUF503) L2D31_08145 PF02033 Ribosome-binding factor A L2D31_08150 PF16198 tRNA pseudouridylate synthase B C-terminal domain L2D31_08150 PF01509 TruB family pseudouridylate synthase (N terminal domain) L2D31_08155 PF01687 Riboflavin kinase L2D31_08155 PF06574 FAD synthetase L2D31_08160 PF00312 Ribosomal protein S15 L2D31_08165 PF00575 S1 RNA binding domain L2D31_08165 PF03725 3' exoribonuclease family, domain 2 L2D31_08165 PF01138 3' exoribonuclease family, domain 1 L2D31_08165 PF03726 Polyribonucleotide nucleotidyltransferase, RNA binding domain L2D31_08165 PF00013 KH domain L2D31_08175 PF00675 Insulinase (Peptidase family M16) L2D31_08175 PF05193 Peptidase M16 inactive domain L2D31_08180 PF00550 Phosphopantetheine attachment site L2D31_08190 PF00664 ABC transporter transmembrane region L2D31_08190 PF00005 ABC transporter L2D31_08195 PF00664 ABC transporter transmembrane region L2D31_08195 PF00005 ABC transporter L2D31_08225 PF00144 Beta-lactamase L2D31_08230 PF01941 S-adenosylmethionine synthetase (AdoMet synthetase) L2D31_08235 PF00334 Nucleoside diphosphate kinase L2D31_08265 PF01658 Myo-inositol-1-phosphate synthase L2D31_08285 PF02655 ATP-grasp domain L2D31_08290 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain L2D31_08290 PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain L2D31_08310 PF00733 Asparagine synthase L2D31_08310 PF13537 Glutamine amidotransferase domain L2D31_08315 PF05239 PRC-barrel domain L2D31_08320 PF01262 Alanine dehydrogenase/PNT, C-terminal domain L2D31_08320 PF16924 Dipicolinate synthase subunit A N-terminal domain L2D31_08325 PF02441 Flavoprotein L2D31_08330 PF01118 Semialdehyde dehydrogenase, NAD binding domain L2D31_08330 PF02774 Semialdehyde dehydrogenase, dimerisation domain L2D31_08335 PF13840 ACT domain L2D31_08335 PF00696 Amino acid kinase family L2D31_08340 PF00701 Dihydrodipicolinate synthetase family L2D31_08345 PF00753 Metallo-beta-lactamase superfamily L2D31_08345 PF07521 Zn-dependent metallo-hydrolase RNA specificity domain L2D31_08345 PF17770 Ribonuclease J C-terminal domain L2D31_08350 PF00574 Clp protease L2D31_08355 PF14035 YlzJ-like protein L2D31_08360 PF17854 FtsK alpha domain L2D31_08360 PF09397 Ftsk gamma domain L2D31_08360 PF01580 FtsK/SpoIIIE family L2D31_08365 PF00392 Bacterial regulatory proteins, gntR family L2D31_08365 PF07702 UTRA domain L2D31_08370 PF07690 Major Facilitator Superfamily L2D31_08375 PF03176 MMPL family L2D31_08380 PF05193 Peptidase M16 inactive domain L2D31_08385 PF00675 Insulinase (Peptidase family M16) L2D31_08385 PF05193 Peptidase M16 inactive domain L2D31_08395 PF03176 MMPL family L2D31_08405 PF11588 Protein of unknown function (DUF3243) L2D31_08410 PF11868 Protein of unknown function (DUF3388) L2D31_08415 PF13464 Domain of unknown function (DUF4115) L2D31_08420 PF01066 CDP-alcohol phosphatidyltransferase L2D31_08425 PF18146 Damage-inducible protein CinA KH domain L2D31_08425 PF02464 Competence-damaged protein L2D31_08425 PF00994 Probable molybdopterin binding domain L2D31_08430 PF00154 recA bacterial DNA recombination protein L2D31_08435 PF01966 HD domain L2D31_08435 PF00013 KH domain L2D31_08435 PF12072 Domain of unknown function (DUF3552) L2D31_08440 PF13277 YmdB-like protein L2D31_08445 PF04232 Stage V sporulation protein S (SpoVS) L2D31_08450 PF00873 AcrB/AcrD/AcrF family L2D31_08455 PF08240 Alcohol dehydrogenase GroES-like domain L2D31_08455 PF00107 Zinc-binding dehydrogenase L2D31_08460 PF00155 Aminotransferase class I and II L2D31_08465 PF04055 Radical SAM superfamily L2D31_08465 PF00919 Uncharacterized protein family UPF0004 L2D31_08465 PF01938 TRAM domain L2D31_08470 PF06133 Control of competence regulator ComK, YlbF/YmcA L2D31_08475 PF10628 Outer spore coat protein E (CotE) L2D31_08485 PF08676 MutL C terminal dimerisation domain L2D31_08485 PF01119 DNA mismatch repair protein, C-terminal domain L2D31_08495 PF17735 Biofilm surface layer A L2D31_08505 PF02559 CarD-like/TRCF domain L2D31_08510 PF05908 Poly-gamma-glutamate hydrolase L2D31_08515 PF17874 MalT-like TPR region L2D31_08515 PF18801 response regulator aspartate phosphatase H, N terminal L2D31_08520 PF00082 Subtilase family L2D31_08525 PF05908 Poly-gamma-glutamate hydrolase L2D31_08530 PF02566 OsmC-like protein L2D31_08535 PF00893 Small Multidrug Resistance protein L2D31_08540 PF00893 Small Multidrug Resistance protein L2D31_08555 PF12788 YmaF family L2D31_08565 PF17209 Hfq protein L2D31_08580 PF07972 NrdI Flavodoxin like L2D31_08585 PF08343 Ribonucleotide reductase N-terminal L2D31_08585 PF00317 Ribonucleotide reductase, all-alpha domain L2D31_08585 PF02867 Ribonucleotide reductase, barrel domain L2D31_08590 PF00268 Ribonucleotide reductase, small chain L2D31_08600 PF05036 Sporulation related domain L2D31_08600 PF01520 N-acetylmuramoyl-L-alanine amidase L2D31_08605 PF00004 ATPase family associated with various cellular activities (AAA) L2D31_08605 PF17866 AAA lid domain L2D31_08610 PF01926 50S ribosome-binding GTPase L2D31_08610 PF13167 GTP-binding GTPase N-terminal L2D31_08610 PF16360 GTP-binding GTPase Middle Region L2D31_08615 PF06838 Methionine gamma-lyase L2D31_08620 PF13411 MerR HTH family regulatory protein L2D31_08625 PF03951 Glutamine synthetase, beta-Grasp domain L2D31_08625 PF00120 Glutamine synthetase, catalytic domain L2D31_08645 PF18801 response regulator aspartate phosphatase H, N terminal L2D31_08645 PF17874 MalT-like TPR region L2D31_08655 PF08240 Alcohol dehydrogenase GroES-like domain L2D31_08655 PF00107 Zinc-binding dehydrogenase L2D31_08665 PF04740 LXG domain of WXG superfamily L2D31_08685 PF08818 Domain of unknown function (DU1801) L2D31_08705 PF18801 response regulator aspartate phosphatase H, N terminal L2D31_08715 PF06912 Protein of unknown function (DUF1275) L2D31_08720 PF01068 ATP dependent DNA ligase domain L2D31_08725 PF02735 Ku70/Ku80 beta-barrel domain L2D31_08730 PF09954 Uncharacterized protein conserved in bacteria (DUF2188) L2D31_08740 PF02082 Transcriptional regulator L2D31_08745 PF05368 NmrA-like family L2D31_08755 PF02754 Cysteine-rich domain L2D31_08760 PF11870 Domain of unknown function (DUF3390) L2D31_08760 PF13183 4Fe-4S dicluster domain L2D31_08760 PF02589 LUD domain L2D31_08765 PF02589 LUD domain L2D31_08780 PF04239 Protein of unknown function (DUF421) L2D31_08785 PF16295 Tetracyclin repressor-like, C-terminal domain L2D31_08785 PF00440 Bacterial regulatory proteins, tetR family L2D31_08790 PF00258 Flavodoxin L2D31_08790 PF00067 Cytochrome P450 L2D31_08790 PF00175 Oxidoreductase NAD-binding domain L2D31_08790 PF00667 FAD binding domain L2D31_08795 PF00089 Trypsin L2D31_08800 PF13231 Dolichyl-phosphate-mannose-protein mannosyltransferase L2D31_08805 PF14040 Deoxyribonuclease NucA/NucB L2D31_08810 PF01740 STAS domain L2D31_08815 PF16800 IseA DL-endopeptidase inhibitor L2D31_08825 PF01726 LexA DNA binding domain L2D31_08825 PF00717 Peptidase S24-like L2D31_08830 PF01476 LysM domain L2D31_08835 PF00239 Resolvase, N terminal domain L2D31_08840 PF05979 Bacterial protein of unknown function (DUF896) L2D31_08845 PF02780 Transketolase, C-terminal domain L2D31_08845 PF00456 Transketolase, thiamine diphosphate binding domain L2D31_08845 PF02779 Transketolase, pyrimidine binding domain L2D31_08850 PF10747 Sporulation inhibitor of replication protein SirA L2D31_08855 PF03672 Uncharacterised protein family (UPF0154) L2D31_08860 PF09388 Spo0E like sporulation regulatory protein L2D31_08865 PF02683 Cytochrome C biogenesis protein transmembrane region L2D31_08870 PF07301 Protein of unknown function (DUF1453) L2D31_08875 PF11084 Protein of unknown function (DUF2621) L2D31_08885 PF08179 Small acid-soluble spore protein P family L2D31_08895 PF00694 Aconitase C-terminal domain L2D31_08895 PF00330 Aconitase family (aconitate hydratase) L2D31_08900 PF00578 AhpC/TSA family L2D31_08905 PF13040 Fur-regulated basic protein B L2D31_08910 PF08177 Small acid-soluble spore protein N family L2D31_08920 PF03061 Thioesterase superfamily L2D31_08930 PF01521 Iron-sulphur cluster biosynthesis L2D31_08935 PF02660 Glycerol-3-phosphate acyltransferase L2D31_08940 PF13380 CoA binding domain L2D31_08945 PF00204 DNA gyrase B L2D31_08945 PF00986 DNA gyrase B subunit, carboxyl terminus L2D31_08945 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase L2D31_08945 PF01751 Toprim domain L2D31_08950 PF03989 DNA gyrase C-terminal domain, beta-propeller L2D31_08950 PF00521 DNA gyrase/topoisomerase IV, subunit A L2D31_08960 PF07690 Major Facilitator Superfamily L2D31_08965 PF00180 Isocitrate/isopropylmalate dehydrogenase L2D31_08970 PF14602 Hexapeptide repeat of succinyl-transferase L2D31_08970 PF12464 Maltose acetyltransferase L2D31_08975 PF01451 Low molecular weight phosphotyrosine protein phosphatase L2D31_08980 PF02040 Arsenical pump membrane protein L2D31_08985 PF01022 Bacterial regulatory protein, arsR family L2D31_08995 PF01323 DSBA-like thioredoxin domain L2D31_09000 PF02525 Flavodoxin-like fold L2D31_09010 PF00440 Bacterial regulatory proteins, tetR family L2D31_09015 PF02525 Flavodoxin-like fold L2D31_09020 PF01638 HxlR-like helix-turn-helix L2D31_09030 PF00291 Pyridoxal-phosphate dependent enzyme L2D31_09035 PF01042 Endoribonuclease L-PSP L2D31_09050 PF01494 FAD binding domain L2D31_09065 PF12802 MarR family L2D31_09080 PF08803 Putative mono-oxygenase ydhR L2D31_09100 PF07859 alpha/beta hydrolase fold L2D31_09100 PF00934 PE family L2D31_09105 PF13411 MerR HTH family regulatory protein L2D31_09110 PF00232 Glycosyl hydrolase family 1 L2D31_09115 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 L2D31_09115 PF00367 phosphotransferase system, EIIB L2D31_09115 PF02378 Phosphotransferase system, EIIC L2D31_09120 PF00874 PRD domain L2D31_09120 PF03123 CAT RNA binding domain L2D31_09130 PF00512 His Kinase A (phospho-acceptor) domain L2D31_09130 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase L2D31_09135 PF00072 Response regulator receiver domain L2D31_09135 PF00486 Transcriptional regulatory protein, C terminal L2D31_09140 PF02055 Glycosyl hydrolase family 30 TIM-barrel domain L2D31_09140 PF17189 Glycosyl hydrolase family 30 beta sandwich domain L2D31_09145 PF03422 Carbohydrate binding module (family 6) L2D31_09145 PF04616 Glycosyl hydrolases family 43 L2D31_09150 PF00171 Aldehyde dehydrogenase family L2D31_09155 PF02056 Family 4 glycosyl hydrolase L2D31_09155 PF11975 Family 4 glycosyl hydrolase C-terminal domain L2D31_09160 PF00528 Binding-protein-dependent transport system inner membrane component L2D31_09165 PF00528 Binding-protein-dependent transport system inner membrane component L2D31_09170 PF01547 Bacterial extracellular solute-binding protein L2D31_09175 PF00356 Bacterial regulatory proteins, lacI family L2D31_09180 PF00834 Ribulose-phosphate 3 epimerase family L2D31_09195 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 L2D31_09205 PF00583 Acetyltransferase (GNAT) family L2D31_09210 PF00155 Aminotransferase class I and II L2D31_09210 PF00392 Bacterial regulatory proteins, gntR family L2D31_09220 PF01047 MarR family L2D31_09225 PF07690 Major Facilitator Superfamily L2D31_09230 PF01116 Fructose-bisphosphate aldolase class-II L2D31_09235 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit L2D31_09235 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 L2D31_09235 PF02378 Phosphotransferase system, EIIC L2D31_09240 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit L2D31_09240 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 L2D31_09245 PF00294 pfkB family carbohydrate kinase L2D31_09250 PF01380 SIS domain L2D31_09250 PF01418 Helix-turn-helix domain, rpiR family L2D31_09255 PF13091 PLD-like domain L2D31_09275 PF00171 Aldehyde dehydrogenase family L2D31_09280 PF00175 Oxidoreductase NAD-binding domain L2D31_09280 PF00258 Flavodoxin L2D31_09280 PF00667 FAD binding domain L2D31_09285 PF01077 Nitrite and sulphite reductase 4Fe-4S domain L2D31_09285 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain L2D31_09290 PF13193 AMP-binding enzyme C-terminal domain L2D31_09290 PF00501 AMP-binding enzyme L2D31_09290 PF16177 Acetyl-coenzyme A synthetase N-terminus L2D31_09295 PF01039 Carboxyl transferase domain L2D31_09300 PF00378 Enoyl-CoA hydratase/isomerase L2D31_09305 PF00682 HMGL-like L2D31_09310 PF00364 Biotin-requiring enzyme L2D31_09315 PF02785 Biotin carboxylase C-terminal domain L2D31_09315 PF00289 Biotin carboxylase, N-terminal domain L2D31_09315 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain L2D31_09320 PF00501 AMP-binding enzyme L2D31_09320 PF13193 AMP-binding enzyme C-terminal domain L2D31_09325 PF02770 Acyl-CoA dehydrogenase, middle domain L2D31_09325 PF00441 Acyl-CoA dehydrogenase, C-terminal domain L2D31_09325 PF02771 Acyl-CoA dehydrogenase, N-terminal domain L2D31_09330 PF02638 Glycosyl hydrolase-like 10 L2D31_09335 PF13350 Tyrosine phosphatase family L2D31_09340 PF08220 DeoR-like helix-turn-helix domain L2D31_09340 PF00455 DeoR C terminal sensor domain L2D31_09345 PF14552 Tautomerase enzyme L2D31_09355 PF05651 Putative sugar diacid recognition L2D31_09355 PF17853 GGDEF-like domain L2D31_09355 PF13556 PucR C-terminal helix-turn-helix domain L2D31_09360 PF01565 FAD binding domain L2D31_09360 PF02913 FAD linked oxidases, C-terminal domain L2D31_09365 PF02754 Cysteine-rich domain L2D31_09365 PF13183 4Fe-4S dicluster domain L2D31_09370 PF03323 Bacillus/Clostridium GerA spore germination protein L2D31_09375 PF03845 Spore germination protein L2D31_09385 PF12728 Helix-turn-helix domain L2D31_09390 PF04138 GtrA-like protein L2D31_09395 PF00483 Nucleotidyl transferase L2D31_09400 PF09335 SNARE associated Golgi protein L2D31_09405 PF02602 Uroporphyrinogen-III synthase HemD L2D31_09415 PF00296 Luciferase-like monooxygenase L2D31_09430 PF01554 MatE L2D31_09435 PF02113 D-Ala-D-Ala carboxypeptidase 3 (S13) family L2D31_09440 PF01095 Pectinesterase L2D31_09445 PF04239 Protein of unknown function (DUF421) L2D31_09450 PF07992 Pyridine nucleotide-disulphide oxidoreductase L2D31_09450 PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster L2D31_09455 PF01493 GXGXG motif L2D31_09455 PF01645 Conserved region in glutamate synthase L2D31_09455 PF04898 Glutamate synthase central domain L2D31_09455 PF00310 Glutamine amidotransferases class-II L2D31_09460 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family L2D31_09460 PF03466 LysR substrate binding domain L2D31_09465 PF00005 ABC transporter L2D31_09465 PF00664 ABC transporter transmembrane region L2D31_09470 PF00664 ABC transporter transmembrane region L2D31_09470 PF00005 ABC transporter L2D31_09475 PF06445 GyrI-like small molecule binding domain L2D31_09475 PF13411 MerR HTH family regulatory protein L2D31_09480 PF00583 Acetyltransferase (GNAT) family L2D31_09485 PF00171 Aldehyde dehydrogenase family L2D31_09490 PF01472 PUA domain L2D31_09490 PF00696 Amino acid kinase family L2D31_09495 PF14748 Pyrroline-5-carboxylate reductase dimerisation L2D31_09495 PF03807 NADP oxidoreductase coenzyme F420-dependent L2D31_09500 PF00067 Cytochrome P450 L2D31_09505 PF04879 Molybdopterin oxidoreductase Fe4S4 domain L2D31_09505 PF00384 Molybdopterin oxidoreductase L2D31_09505 PF01568 Molydopterin dinucleotide binding domain L2D31_09510 PF00457 Glycosyl hydrolases family 11 L2D31_09515 PF00370 FGGY family of carbohydrate kinases, N-terminal domain L2D31_09515 PF02782 FGGY family of carbohydrate kinases, C-terminal domain L2D31_09520 PF01261 Xylose isomerase-like TIM barrel L2D31_09525 PF00480 ROK family L2D31_09530 PF17851 Beta xylosidase C-terminal Concanavalin A-like domain L2D31_09530 PF04616 Glycosyl hydrolases family 43 L2D31_09540 PF01588 Putative tRNA binding domain L2D31_09550 PF14158 YndJ-like protein L2D31_09555 PF13761 Domain of unknown function (DUF4166) L2D31_09565 PF13305 Tetracyclin repressor-like, C-terminal domain L2D31_09565 PF00440 Bacterial regulatory proteins, tetR family L2D31_09570 PF00753 Metallo-beta-lactamase superfamily L2D31_09575 PF06445 GyrI-like small molecule binding domain L2D31_09580 PF08279 HTH domain L2D31_09580 PF13280 WYL domain L2D31_09590 PF01022 Bacterial regulatory protein, arsR family L2D31_09595 PF00324 Amino acid permease L2D31_09610 PF03972 MmgE/PrpD family L2D31_09615 PF00285 Citrate synthase, C-terminal domain L2D31_09620 PF04238 Protein of unknown function (DUF420) L2D31_09630 PF06725 3D domain L2D31_09630 PF01476 LysM domain L2D31_09635 PF00270 DEAD/DEAH box helicase L2D31_09635 PF00271 Helicase conserved C-terminal domain L2D31_09635 PF00570 HRDC domain L2D31_09635 PF16124 RecQ zinc-binding L2D31_09635 PF09382 RQC domain L2D31_09645 PF01258 Prokaryotic dksA/traR C4-type zinc finger L2D31_09655 PF08000 Bacterial PH domain L2D31_09670 PF00171 Aldehyde dehydrogenase family L2D31_09675 PF13249 Squalene-hopene cyclase N-terminal domain L2D31_09675 PF13243 Squalene-hopene cyclase C-terminal domain L2D31_09680 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain L2D31_09680 PF02777 Iron/manganese superoxide dismutases, C-terminal domain L2D31_09685 PF01758 Sodium Bile acid symporter family L2D31_09690 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) L2D31_09690 PF00364 Biotin-requiring enzyme L2D31_09690 PF02817 e3 binding domain L2D31_09695 PF16078 2-oxoglutarate dehydrogenase N-terminus L2D31_09695 PF00676 Dehydrogenase E1 component L2D31_09695 PF16870 2-oxoglutarate dehydrogenase C-terminal L2D31_09695 PF02779 Transketolase, pyrimidine binding domain L2D31_09700 PF00092 von Willebrand factor type A domain L2D31_09705 PF07728 AAA domain (dynein-related subfamily) L2D31_09710 PF13627 Prokaryotic lipoprotein-attachment site L2D31_09710 PF00080 Copper/zinc superoxide dismutase (SODC) L2D31_09715 PF01476 LysM domain L2D31_09715 PF00877 NlpC/P60 family L2D31_09720 PF02457 DisA bacterial checkpoint controller nucleotide-binding L2D31_09720 PF10372 Bacterial membrane-spanning protein N-terminus L2D31_09725 PF01554 MatE L2D31_09730 PF02585 GlcNAc-PI de-N-acetylase L2D31_09735 PF08830 Protein of unknown function (DUF1806) L2D31_09745 PF00892 EamA-like transporter family L2D31_09760 PF01638 HxlR-like helix-turn-helix L2D31_09765 PF00881 Nitroreductase family L2D31_09770 PF11755 Protein of unknown function (DUF3311) L2D31_09775 PF00474 Sodium:solute symporter family L2D31_09780 PF17820 PDZ domain L2D31_09780 PF03572 Peptidase family S41 L2D31_09780 PF01471 Putative peptidoglycan binding domain L2D31_09785 PF08241 Methyltransferase domain L2D31_09795 PF02557 D-alanyl-D-alanine carboxypeptidase L2D31_09800 PF01048 Phosphorylase superfamily L2D31_09805 PF14191 YodL-like L2D31_09810 PF01569 PAP2 superfamily L2D31_09815 PF14162 YozD-like protein L2D31_09825 PF06855 YozE SAM-like fold L2D31_09830 PF14122 YokU-like protein, putative antitoxin L2D31_09835 PF12544 Lysine-2,3-aminomutase L2D31_09840 PF02954 Bacterial regulatory protein, Fis family L2D31_09840 PF13426 PAS domain L2D31_09840 PF00158 Sigma-54 interaction domain L2D31_09845 PF00535 Glycosyl transferase family 2 L2D31_09860 PF12996 DUF based on E. rectale Gene description (DUF3880) L2D31_09870 PF02719 Polysaccharide biosynthesis protein L2D31_09875 PF01641 SelR domain L2D31_09880 PF01625 Peptide methionine sulfoxide reductase L2D31_09885 PF01047 MarR family L2D31_09900 PF17431 Uncharacterized YmpT-like L2D31_09905 PF09911 Uncharacterized protein conserved in bacteria (DUF2140) L2D31_09910 PF13472 GDSL-like Lipase/Acylhydrolase family L2D31_09915 PF02630 SCO1/SenC L2D31_09920 PF02645 Uncharacterised protein, DegV family COG1307 L2D31_09925 PF10751 Protein of unknown function (DUF2535) L2D31_09930 PF00291 Pyridoxal-phosphate dependent enzyme L2D31_09930 PF00585 C-terminal regulatory domain of Threonine dehydratase L2D31_09935 PF08461 Ribonuclease R winged-helix domain L2D31_09935 PF00158 Sigma-54 interaction domain L2D31_09940 PF03006 Haemolysin-III related L2D31_09950 PF00186 Dihydrofolate reductase L2D31_09955 PF00303 Thymidylate synthase L2D31_09960 PF04608 Phosphatidylglycerophosphatase A L2D31_09965 PF14005 YpjP-like protein L2D31_09970 PF04445 Putative SAM-dependent methyltransferase L2D31_09975 PF06491 Disulphide isomerase L2D31_09980 PF00920 Dehydratase family L2D31_09985 PF08712 Scaffold protein Nfu/NifU N terminal L2D31_09985 PF13769 Virulence factor L2D31_09990 PF01966 HD domain L2D31_09995 PF00255 Glutathione peroxidase L2D31_10000 PF01268 Formate--tetrahydrofolate ligase L2D31_10005 PF04204 Homoserine O-succinyltransferase L2D31_10010 PF00534 Glycosyl transferases group 1 L2D31_10010 PF06925 Monogalactosyldiacylglycerol (MGDG) synthase L2D31_10020 PF00313 'Cold-shock' DNA-binding domain L2D31_10030 PF10782 Zinc-finger L2D31_10035 PF13456 Reverse transcriptase-like L2D31_10040 PF02592 Putative vitamin uptake transporter L2D31_10045 PF13456 Reverse transcriptase-like L2D31_10055 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain L2D31_10055 PF01367 5'-3' exonuclease, C-terminal SAM fold L2D31_10065 PF00350 Dynamin family L2D31_10070 PF04140 Isoprenylcysteine carboxyl methyltransferase (ICMT) family L2D31_10075 PF00195 Chalcone and stilbene synthases, N-terminal domain L2D31_10075 PF02797 Chalcone and stilbene synthases, C-terminal domain L2D31_10080 PF04229 GrpB protein L2D31_10080 PF13673 Acetyltransferase (GNAT) domain L2D31_10085 PF01522 Polysaccharide deacetylase L2D31_10090 PF00860 Permease family L2D31_10100 PF02074 Carboxypeptidase Taq (M32) metallopeptidase L2D31_10105 PF13307 Helicase C-terminal domain L2D31_10115 PF01170 Putative RNA methylase family UPF0020 L2D31_10115 PF02926 THUMP domain L2D31_10125 PF05103 DivIVA protein L2D31_10130 PF06908 YspA SLOG family L2D31_10135 PF11122 Inner spore coat protein D L2D31_10140 PF13482 RNase_H superfamily L2D31_10145 PF09369 Domain of unknown function (DUF1998) L2D31_10145 PF00271 Helicase conserved C-terminal domain L2D31_10145 PF00270 DEAD/DEAH box helicase L2D31_10150 PF00724 NADH:flavin oxidoreductase / NADH oxidase family L2D31_10155 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 L2D31_10165 PF14179 YppG-like protein L2D31_10185 PF10720 Protein of unknown function (DUF2515) L2D31_10190 PF03838 Recombination protein U L2D31_10195 PF00912 Transglycosylase L2D31_10195 PF00905 Penicillin binding protein transpeptidase domain L2D31_10205 PF00730 HhH-GPD superfamily base excision DNA repair protein L2D31_10205 PF10576 Iron-sulfur binding domain of endonuclease III L2D31_10205 PF00633 Helix-hairpin-helix motif L2D31_10210 PF07261 Replication initiation and membrane attachment L2D31_10215 PF01336 OB-fold nucleic acid binding domain L2D31_10215 PF00152 tRNA synthetases class II (D, K and N) L2D31_10220 PF17881 Domain of unknown function (DUF5590) L2D31_10220 PF03413 Peptidase propeptide and YPEB domain L2D31_10225 PF14084 Protein of unknown function (DUF4264) L2D31_10230 PF13307 Helicase C-terminal domain L2D31_10230 PF04851 Type III restriction enzyme, res subunit L2D31_10230 PF00929 Exonuclease L2D31_10235 PF02261 Aspartate decarboxylase L2D31_10240 PF02569 Pantoate-beta-alanine ligase L2D31_10245 PF02548 Ketopantoate hydroxymethyltransferase L2D31_10250 PF08279 HTH domain L2D31_10250 PF02237 Biotin protein ligase C terminal domain L2D31_10250 PF03099 Biotin/lipoate A/B protein ligase family L2D31_10255 PF01743 Poly A polymerase head domain L2D31_10255 PF12627 Probable RNA and SrmB- binding site of polymerase A L2D31_10255 PF13735 tRNA nucleotidyltransferase domain 2 putative L2D31_10260 PF13439 Glycosyltransferase Family 4 L2D31_10260 PF00534 Glycosyl transferases group 1 L2D31_10265 PF02585 GlcNAc-PI de-N-acetylase L2D31_10270 PF02142 MGS-like domain L2D31_10275 PF05173 Dihydrodipicolinate reductase, C-terminus L2D31_10275 PF01113 Dihydrodipicolinate reductase, N-terminus L2D31_10280 PF03819 MazG nucleotide pyrophosphohydrolase domain L2D31_10285 PF10035 Uncharacterized protein conserved in bacteria (DUF2179) L2D31_10285 PF02588 Uncharacterised 5xTM membrane BCR, YitT family COG1284 L2D31_10290 PF09577 Sporulation protein YpjB (SpoYpjB) L2D31_10295 PF07187 Protein of unknown function (DUF1405) L2D31_10300 PF00032 Cytochrome b(C-terminal)/b6/petD L2D31_10300 PF13442 Cytochrome C oxidase, cbb3-type, subunit III L2D31_10305 PF00033 Cytochrome b/b6/petB L2D31_10310 PF00355 Rieske [2Fe-2S] domain L2D31_10315 PF10673 Protein of unknown function (DUF2487) L2D31_10320 PF08864 UPF0302 domain L2D31_10320 PF08858 IDEAL domain L2D31_10330 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) L2D31_10335 PF02153 Prephenate dehydrogenase L2D31_10335 PF01842 ACT domain L2D31_10340 PF00155 Aminotransferase class I and II L2D31_10345 PF00290 Tryptophan synthase alpha chain L2D31_10350 PF00291 Pyridoxal-phosphate dependent enzyme L2D31_10355 PF00697 N-(5'phosphoribosyl)anthranilate (PRA) isomerase L2D31_10360 PF00218 Indole-3-glycerol phosphate synthase L2D31_10365 PF02885 Glycosyl transferase family, helical bundle domain L2D31_10365 PF00591 Glycosyl transferase family, a/b domain L2D31_10370 PF00425 chorismate binding enzyme L2D31_10370 PF04715 Anthranilate synthase component I, N terminal region L2D31_10375 PF07736 Chorismate mutase type I L2D31_10380 PF01761 3-dehydroquinate synthase L2D31_10385 PF01264 Chorismate synthase L2D31_10390 PF01739 CheR methyltransferase, SAM binding domain L2D31_10390 PF03705 CheR methyltransferase, all-alpha domain L2D31_10395 PF00334 Nucleoside diphosphate kinase L2D31_10400 PF00348 Polyprenyl synthetase L2D31_10405 PF01209 ubiE/COQ5 methyltransferase family L2D31_10410 PF07307 Heptaprenyl diphosphate synthase (HEPPP synthase) subunit 1 L2D31_10415 PF02081 Tryptophan RNA-binding attenuator protein L2D31_10420 PF01227 GTP cyclohydrolase I L2D31_10425 PF00216 Bacterial DNA-binding protein L2D31_10430 PF09547 Stage IV sporulation protein A (spore_IV_A) L2D31_10440 PF10966 Protein of unknown function (DUF2768) L2D31_10445 PF07479 NAD-dependent glycerol-3-phosphate dehydrogenase C-terminus L2D31_10445 PF01210 NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus L2D31_10450 PF14714 KH-domain-like of EngA bacterial GTPase enzymes, C-terminal L2D31_10450 PF01926 50S ribosome-binding GTPase L2D31_10460 PF14045 YIEGIA protein L2D31_10470 PF14140 YpzI-like protein L2D31_10475 PF01070 FMN-dependent dehydrogenase L2D31_10480 PF00575 S1 RNA binding domain L2D31_10485 PF02224 Cytidylate kinase L2D31_10490 PF17313 Family of unknown function (DUF5359) L2D31_10495 PF07238 PilZ domain L2D31_10495 PF12945 Flagellar protein YcgR L2D31_10500 PF03413 Peptidase propeptide and YPEB domain L2D31_10500 PF14620 YpeB sporulation L2D31_10505 PF01471 Putative peptidoglycan binding domain L2D31_10505 PF07486 Cell Wall Hydrolase L2D31_10510 PF13367 PrsW family intramembrane metalloprotease L2D31_10520 PF00208 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase L2D31_10520 PF02812 Glu/Leu/Phe/Val dehydrogenase, dimerisation domain L2D31_10525 PF05389 Negative regulator of genetic competence (MecA) L2D31_10530 PF00149 Calcineurin-like phosphoesterase L2D31_10535 PF10864 Protein of unknown function (DUF2663) L2D31_10540 PF01476 LysM domain L2D31_10545 PF02517 CPBP intramembrane metalloprotease L2D31_10550 PF00271 Helicase conserved C-terminal domain L2D31_10550 PF00270 DEAD/DEAH box helicase L2D31_10555 PF14493 Helix-turn-helix domain L2D31_10565 PF12822 ECF transporter, substrate-specific component L2D31_10570 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain L2D31_10570 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain L2D31_10570 PF01842 ACT domain L2D31_10575 PF01551 Peptidase family M23 L2D31_10575 PF01476 LysM domain L2D31_10585 PF08281 Sigma-70, region 4 L2D31_10585 PF04542 Sigma-70 region 2 L2D31_10590 PF00672 HAMP domain L2D31_10590 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase L2D31_10590 PF18698 Histidine kinase sensor domain L2D31_10590 PF00512 His Kinase A (phospho-acceptor) domain L2D31_10590 PF00989 PAS fold L2D31_10595 PF00072 Response regulator receiver domain L2D31_10595 PF00486 Transcriptional regulatory protein, C terminal L2D31_10600 PF01578 Cytochrome C assembly protein L2D31_10605 PF05140 ResB-like family L2D31_10610 PF00578 AhpC/TSA family L2D31_10615 PF01479 S4 domain L2D31_10615 PF00849 RNA pseudouridylate synthase L2D31_10620 PF07670 Nucleoside recognition L2D31_10625 PF07670 Nucleoside recognition L2D31_10630 PF07943 Penicillin-binding protein 5, C-terminal domain L2D31_10630 PF00768 D-alanyl-D-alanine carboxypeptidase L2D31_10635 PF13047 Protein of unknown function (DUF3907) L2D31_10640 PF04079 Segregation and condensation complex subunit ScpB L2D31_10645 PF02616 Segregation and condensation protein ScpA L2D31_10655 PF03745 Domain of unknown function (DUF309) L2D31_10660 PF00583 Acetyltransferase (GNAT) family L2D31_10665 PF00885 6,7-dimethyl-8-ribityllumazine synthase L2D31_10675 PF00677 Lumazine binding domain L2D31_10695 PF07690 Major Facilitator Superfamily L2D31_10700 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD L2D31_10705 PF06207 Protein of unknown function (DUF1002) L2D31_10710 PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain L2D31_10710 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain L2D31_10715 PF03323 Bacillus/Clostridium GerA spore germination protein L2D31_10720 PF14097 Stage V sporulation protein AE1 L2D31_10725 PF03862 SpoVAC/SpoVAEB sporulation membrane protein L2D31_10730 PF07451 Stage V sporulation protein AD (SpoVAD) L2D31_10735 PF03862 SpoVAC/SpoVAEB sporulation membrane protein L2D31_10740 PF13782 Stage V sporulation protein AB L2D31_10745 PF12164 Stage V sporulation protein AA L2D31_10750 PF04542 Sigma-70 region 2 L2D31_10750 PF04539 Sigma-70 region 3 L2D31_10750 PF04545 Sigma-70, region 4 L2D31_10755 PF13581 Histidine kinase-like ATPase domain L2D31_10760 PF01740 STAS domain L2D31_10765 PF07943 Penicillin-binding protein 5, C-terminal domain L2D31_10765 PF00768 D-alanyl-D-alanine carboxypeptidase L2D31_10770 PF01048 Phosphorylase superfamily L2D31_10775 PF01676 Metalloenzyme superfamily L2D31_10780 PF02899 Phage integrase, N-terminal SAM-like domain L2D31_10780 PF00589 Phage integrase family L2D31_10785 PF14004 Protein of unknown function (DUF4227) L2D31_10790 PF01475 Ferric uptake regulator family L2D31_10795 PF01944 Stage II sporulation protein M L2D31_10800 PF05922 Peptidase inhibitor I9 L2D31_10800 PF00082 Subtilase family L2D31_10810 PF13673 Acetyltransferase (GNAT) domain L2D31_10820 PF00293 NUDIX domain L2D31_10825 PF00248 Aldo/keto reductase family L2D31_10840 PF12146 Serine aminopeptidase, S33 L2D31_10845 PF18801 response regulator aspartate phosphatase H, N terminal L2D31_10850 PF10827 Protein of unknown function (DUF2552) L2D31_10855 PF01521 Iron-sulphur cluster biosynthesis L2D31_10860 PF03330 Lytic transglycolase L2D31_10865 PF13673 Acetyltransferase (GNAT) domain L2D31_10865 PF04229 GrpB protein L2D31_10870 PF00583 Acetyltransferase (GNAT) family L2D31_10875 PF10787 Uncharacterised protein from bacillus cereus group L2D31_10880 PF11799 impB/mucB/samB family C-terminal domain L2D31_10880 PF00817 impB/mucB/samB family L2D31_10885 PF08863 YolD-like protein L2D31_10890 PF07690 Major Facilitator Superfamily L2D31_10895 PF00485 Phosphoribulokinase / Uridine kinase family L2D31_10900 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain L2D31_10900 PF07992 Pyridine nucleotide-disulphide oxidoreductase L2D31_10910 PF00106 short chain dehydrogenase L2D31_10915 PF00753 Metallo-beta-lactamase superfamily L2D31_10920 PF03807 NADP oxidoreductase coenzyme F420-dependent L2D31_10920 PF14748 Pyrroline-5-carboxylate reductase dimerisation L2D31_10930 PF01546 Peptidase family M20/M25/M40 L2D31_10935 PF00724 NADH:flavin oxidoreductase / NADH oxidase family L2D31_10940 PF12146 Serine aminopeptidase, S33 L2D31_10945 PF12897 Alanine-glyoxylate amino-transferase L2D31_10950 PF12706 Beta-lactamase superfamily domain L2D31_10955 PF00479 Glucose-6-phosphate dehydrogenase, NAD binding domain L2D31_10955 PF02781 Glucose-6-phosphate dehydrogenase, C-terminal domain L2D31_10960 PF00392 Bacterial regulatory proteins, gntR family L2D31_10960 PF07702 UTRA domain L2D31_10965 PF00232 Glycosyl hydrolase family 1 L2D31_10970 PF02378 Phosphotransferase system, EIIC L2D31_10975 PF02255 PTS system, Lactose/Cellobiose specific IIA subunit L2D31_10980 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit L2D31_10995 PF06800 Sugar transport protein L2D31_11000 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase L2D31_11000 PF00393 6-phosphogluconate dehydrogenase, C-terminal domain L2D31_11005 PF00817 impB/mucB/samB family L2D31_11005 PF11799 impB/mucB/samB family C-terminal domain L2D31_11005 PF11798 IMS family HHH motif L2D31_11010 PF00795 Carbon-nitrogen hydrolase L2D31_11020 PF02096 60Kd inner membrane protein L2D31_11025 PF01584 CheW-like domain L2D31_11030 PF07687 Peptidase dimerisation domain L2D31_11030 PF01546 Peptidase family M20/M25/M40 L2D31_11035 PF01039 Carboxyl transferase domain L2D31_11050 PF03734 L,D-transpeptidase catalytic domain L2D31_11055 PF06081 Aromatic acid exporter family member 1 L2D31_11055 PF11728 Putative aromatic acid exporter C-terminal domain L2D31_11060 PF00005 ABC transporter L2D31_11065 PF00528 Binding-protein-dependent transport system inner membrane component L2D31_11070 PF00497 Bacterial extracellular solute-binding proteins, family 3 L2D31_11075 PF06491 Disulphide isomerase L2D31_11080 PF00781 Diacylglycerol kinase catalytic domain L2D31_11090 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) L2D31_11090 PF00364 Biotin-requiring enzyme L2D31_11090 PF02817 e3 binding domain L2D31_11095 PF02780 Transketolase, C-terminal domain L2D31_11095 PF02779 Transketolase, pyrimidine binding domain L2D31_11100 PF00676 Dehydrogenase E1 component L2D31_11105 PF07992 Pyridine nucleotide-disulphide oxidoreductase L2D31_11105 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain L2D31_11110 PF00871 Acetokinase family L2D31_11115 PF00208 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase L2D31_11115 PF02812 Glu/Leu/Phe/Val dehydrogenase, dimerisation domain L2D31_11120 PF01515 Phosphate acetyl/butaryl transferase L2D31_11125 PF02954 Bacterial regulatory protein, Fis family L2D31_11125 PF00989 PAS fold L2D31_11125 PF00158 Sigma-54 interaction domain L2D31_11130 PF11118 Protein of unknown function (DUF2627) L2D31_11135 PF03009 Glycerophosphoryl diester phosphodiesterase family L2D31_11140 PF18801 response regulator aspartate phosphatase H, N terminal L2D31_11145 PF08769 Sporulation initiation factor Spo0A C terminal L2D31_11145 PF00072 Response regulator receiver domain L2D31_11150 PF17820 PDZ domain L2D31_11150 PF05580 SpoIVB peptidase S55 L2D31_11155 PF13476 AAA domain L2D31_11160 PF01316 Arginine repressor, DNA binding domain L2D31_11160 PF02863 Arginine repressor, C-terminal domain L2D31_11165 PF01728 FtsJ-like methyltransferase L2D31_11165 PF01479 S4 domain L2D31_11170 PF13292 1-deoxy-D-xylulose-5-phosphate synthase L2D31_11170 PF02779 Transketolase, pyrimidine binding domain L2D31_11170 PF02780 Transketolase, C-terminal domain L2D31_11175 PF00348 Polyprenyl synthetase L2D31_11180 PF02609 Exonuclease VII small subunit L2D31_11185 PF02601 Exonuclease VII, large subunit L2D31_11185 PF13742 OB-fold nucleic acid binding domain L2D31_11190 PF00763 Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain L2D31_11190 PF02882 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain L2D31_11195 PF01029 NusB family L2D31_11200 PF03780 Asp23 family, cell envelope-related function L2D31_11205 PF02785 Biotin carboxylase C-terminal domain L2D31_11205 PF00289 Biotin carboxylase, N-terminal domain L2D31_11205 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain L2D31_11210 PF00364 Biotin-requiring enzyme L2D31_11215 PF12685 SpoIIIAH-like protein L2D31_11225 PF09581 Stage III sporulation protein AF (Spore_III_AF) L2D31_11230 PF09546 Stage III sporulation protein AE (spore_III_AE) L2D31_11235 PF06686 Stage III sporulation protein AC/AD protein family L2D31_11240 PF06686 Stage III sporulation protein AC/AD protein family L2D31_11245 PF09548 Stage III sporulation protein AB (spore_III_AB) L2D31_11255 PF10942 Protein of unknown function (DUF2619) L2D31_11260 PF01132 Elongation factor P (EF-P) OB domain L2D31_11260 PF08207 Elongation factor P (EF-P) KOW-like domain L2D31_11260 PF09285 Elongation factor P, C-terminal L2D31_11265 PF01321 Creatinase/Prolidase N-terminal domain L2D31_11265 PF00557 Metallopeptidase family M24 L2D31_11270 PF01220 Dehydroquinase class II L2D31_11275 PF11085 Conserved membrane protein YqhR L2D31_11280 PF07136 Protein of unknown function (DUF1385) L2D31_11290 PF01734 Patatin-like phospholipase L2D31_11295 PF02742 Iron dependent repressor, metal binding and dimerisation domain L2D31_11295 PF01325 Iron dependent repressor, N-terminal DNA binding domain L2D31_11300 PF03099 Biotin/lipoate A/B protein ligase family L2D31_11305 PF00581 Rhodanese-like domain L2D31_11310 PF02347 Glycine cleavage system P-protein L2D31_11315 PF02347 Glycine cleavage system P-protein L2D31_11320 PF01571 Aminomethyltransferase folate-binding domain L2D31_11320 PF08669 Glycine cleavage T-protein C-terminal barrel domain L2D31_11325 PF00271 Helicase conserved C-terminal domain L2D31_11325 PF00176 SNF2 family N-terminal domain L2D31_11330 PF11079 Bacterial protein YqhG of unknown function L2D31_11340 PF01381 Helix-turn-helix L2D31_11340 PF08671 Anti-repressor SinI L2D31_11345 PF12389 Camelysin metallo-endopeptidase L2D31_11360 PF13028 Protein of unknown function (DUF3889) L2D31_11365 PF14038 YqzE-like protein L2D31_11385 PF07963 Prokaryotic N-terminal methylation motif L2D31_11390 PF07963 Prokaryotic N-terminal methylation motif L2D31_11395 PF00482 Type II secretion system (T2SS), protein F L2D31_11400 PF00437 Type II/IV secretion system protein L2D31_11405 PF01740 STAS domain L2D31_11405 PF14361 RsbT co-antagonist protein rsbRD N-terminal domain L2D31_11415 PF03960 ArsC family L2D31_11420 PF11117 Protein of unknown function (DUF2626) L2D31_11425 PF00753 Metallo-beta-lactamase superfamily L2D31_11430 PF10958 Protein of unknown function (DUF2759) L2D31_11435 PF01910 Thiamine-binding protein L2D31_11440 PF07690 Major Facilitator Superfamily L2D31_11445 PF00246 Zinc carboxypeptidase L2D31_11450 PF00884 Sulfatase L2D31_11455 PF00480 ROK family L2D31_11460 PF06014 Bacterial protein of unknown function (DUF910) L2D31_11465 PF01694 Rhomboid family L2D31_11480 PF01812 5-formyltetrahydrofolate cyclo-ligase family L2D31_11485 PF00471 Ribosomal protein L33 L2D31_11500 PF00005 ABC transporter L2D31_11505 PF00005 ABC transporter L2D31_11510 PF00528 Binding-protein-dependent transport system inner membrane component L2D31_11515 PF00528 Binding-protein-dependent transport system inner membrane component L2D31_11520 PF12849 PBP superfamily domain L2D31_11525 PF03717 Penicillin-binding Protein dimerisation domain L2D31_11525 PF00905 Penicillin binding protein transpeptidase domain L2D31_11530 PF07690 Major Facilitator Superfamily L2D31_11535 PF02777 Iron/manganese superoxide dismutases, C-terminal domain L2D31_11535 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain L2D31_11540 PF04306 Protein of unknown function (DUF456) L2D31_11545 PF06691 Protein of unknown function (DUF1189) L2D31_11550 PF13302 Acetyltransferase (GNAT) domain L2D31_11560 PF04551 GcpE protein L2D31_11575 PF00480 ROK family L2D31_11580 PF01475 Ferric uptake regulator family L2D31_11585 PF00950 ABC 3 transport family L2D31_11590 PF00005 ABC transporter L2D31_11595 PF10035 Uncharacterized protein conserved in bacteria (DUF2179) L2D31_11595 PF02588 Uncharacterised 5xTM membrane BCR, YitT family COG1284 L2D31_11600 PF11116 Protein of unknown function (DUF2624) L2D31_11605 PF01261 Xylose isomerase-like TIM barrel L2D31_11610 PF00270 DEAD/DEAH box helicase L2D31_11610 PF00271 Helicase conserved C-terminal domain L2D31_11620 PF02401 LytB protein L2D31_11625 PF01784 NIF3 (NGG1p interacting factor 3) L2D31_11630 PF04816 tRNA (adenine(22)-N(1))-methyltransferase L2D31_11635 PF13442 Cytochrome C oxidase, cbb3-type, subunit III L2D31_11640 PF04542 Sigma-70 region 2 L2D31_11640 PF04539 Sigma-70 region 3 L2D31_11640 PF04545 Sigma-70, region 4 L2D31_11640 PF03979 Sigma-70 factor, region 1.1 L2D31_11640 PF00140 Sigma-70 factor, region 1.2 L2D31_11645 PF10410 DnaB-helicase binding domain of primase L2D31_11645 PF08275 DNA primase catalytic core, N-terminal domain L2D31_11645 PF01807 CHC2 zinc finger L2D31_11650 PF02639 Uncharacterized BCR, YaiI/YqxD family COG1671 L2D31_11655 PF03618 Kinase/pyrophosphorylase L2D31_11660 PF00571 CBS domain L2D31_11660 PF08279 HTH domain L2D31_11665 PF02092 Glycyl-tRNA synthetase beta subunit L2D31_11670 PF02091 Glycyl-tRNA synthetase alpha subunit L2D31_11675 PF11967 Recombination protein O N terminal L2D31_11675 PF02565 Recombination protein O C terminal L2D31_11680 PF14006 YqzL-like protein L2D31_11685 PF07650 KH domain L2D31_11685 PF01926 50S ribosome-binding GTPase L2D31_11690 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region L2D31_11695 PF01219 Prokaryotic diacylglycerol kinase L2D31_11700 PF02130 Uncharacterized protein family UPF0054 L2D31_11705 PF07698 7TM receptor with intracellular HD hydrolase L2D31_11705 PF07697 7TM-HD extracellular L2D31_11705 PF01966 HD domain L2D31_11710 PF02562 PhoH-like protein L2D31_11715 PF06898 Putative stage IV sporulation protein YqfD L2D31_11720 PF07873 YabP family L2D31_11730 PF12127 SigmaW regulon antibacterial L2D31_11735 PF01972 Serine dehydrogenase proteinase L2D31_11735 PF01957 NfeD-like C-terminal, partner-binding L2D31_11740 PF09424 Yqey-like protein L2D31_11745 PF01165 Ribosomal protein S21 L2D31_11750 PF02690 Na+/Pi-cotransporter L2D31_11755 PF00919 Uncharacterized protein family UPF0004 L2D31_11755 PF04055 Radical SAM superfamily L2D31_11755 PF01938 TRAM domain L2D31_11760 PF04452 RNA methyltransferase L2D31_11770 PF00226 DnaJ domain L2D31_11770 PF01556 DnaJ C terminal domain L2D31_11770 PF00684 DnaJ central domain L2D31_11775 PF00012 Hsp70 protein L2D31_11780 PF01025 GrpE L2D31_11785 PF01628 HrcA protein C terminal domain L2D31_11790 PF04055 Radical SAM superfamily L2D31_11790 PF06969 HemN C-terminal domain L2D31_11795 PF00679 Elongation factor G C-terminus L2D31_11795 PF00009 Elongation factor Tu GTP binding domain L2D31_11795 PF03144 Elongation factor Tu domain 2 L2D31_11795 PF06421 GTP-binding protein LepA C-terminus L2D31_11800 PF12438 Protein of unknown function (DUF3679) L2D31_11805 PF07454 Stage II sporulation protein P (SpoIIP) L2D31_11810 PF03418 Germination protease L2D31_11815 PF01649 Ribosomal protein S20 L2D31_11820 PF06144 DNA polymerase III, delta subunit L2D31_11825 PF14141 YqzM-like protein L2D31_11830 PF03772 Competence protein L2D31_11830 PF00753 Metallo-beta-lactamase superfamily L2D31_11830 PF13567 Domain of unknown function (DUF4131) L2D31_11835 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region L2D31_11840 PF10531 SLBB domain L2D31_11845 PF03807 NADP oxidoreductase coenzyme F420-dependent L2D31_11845 PF14748 Pyrroline-5-carboxylate reductase dimerisation L2D31_11850 PF13649 Methyltransferase domain L2D31_11860 PF01966 HD domain L2D31_11865 PF01467 Cytidylyltransferase-like L2D31_11870 PF01985 CRS1 / YhbY (CRM) domain L2D31_11875 PF08501 Shikimate dehydrogenase substrate binding domain L2D31_11875 PF18317 Shikimate 5'-dehydrogenase C-terminal domain L2D31_11875 PF01488 Shikimate / quinate 5-dehydrogenase L2D31_11880 PF01926 50S ribosome-binding GTPase L2D31_11890 PF08970 Sporulation inhibitor A L2D31_11900 PF00657 GDSL-like Lipase/Acylhydrolase L2D31_11905 PF01522 Polysaccharide deacetylase L2D31_11910 PF18801 response regulator aspartate phosphatase H, N terminal L2D31_11910 PF13176 Tetratricopeptide repeat L2D31_11915 PF04542 Sigma-70 region 2 L2D31_11915 PF04545 Sigma-70, region 4 L2D31_11920 PF07508 Recombinase L2D31_11920 PF00239 Resolvase, N terminal domain L2D31_11920 PF13408 Recombinase zinc beta ribbon domain L2D31_11990 PF11738 Protein of unknown function (DUF3298) L2D31_11990 PF13739 Deacetylase PdaC L2D31_11990 PF01522 Polysaccharide deacetylase L2D31_12020 PF00083 Sugar (and other) transporter L2D31_12025 PF02610 L-arabinose isomerase L2D31_12025 PF11762 L-arabinose isomerase C-terminal domain L2D31_12030 PF00596 Class II Aldolase and Adducin N-terminal domain L2D31_12040 PF00392 Bacterial regulatory proteins, gntR family L2D31_12050 PF01047 MarR family L2D31_12060 PF01380 SIS domain L2D31_12065 PF00215 Orotidine 5'-phosphate decarboxylase / HUMPS family L2D31_12070 PF01638 HxlR-like helix-turn-helix L2D31_12075 PF07859 alpha/beta hydrolase fold L2D31_12080 PF14176 YxiJ-like protein L2D31_12095 PF05593 RHS Repeat L2D31_12100 PF00905 Penicillin binding protein transpeptidase domain L2D31_12105 PF02770 Acyl-CoA dehydrogenase, middle domain L2D31_12105 PF02771 Acyl-CoA dehydrogenase, N-terminal domain L2D31_12105 PF08028 Acyl-CoA dehydrogenase, C-terminal domain L2D31_12110 PF00005 ABC transporter L2D31_12115 PF00497 Bacterial extracellular solute-binding proteins, family 3 L2D31_12120 PF00528 Binding-protein-dependent transport system inner membrane component L2D31_12125 PF00528 Binding-protein-dependent transport system inner membrane component L2D31_12130 PF08240 Alcohol dehydrogenase GroES-like domain L2D31_12130 PF00107 Zinc-binding dehydrogenase L2D31_12145 PF00465 Iron-containing alcohol dehydrogenase L2D31_12150 PF01235 Sodium:alanine symporter family L2D31_12155 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family L2D31_12155 PF03466 LysR substrate binding domain L2D31_12160 PF00107 Zinc-binding dehydrogenase L2D31_12160 PF08240 Alcohol dehydrogenase GroES-like domain L2D31_12165 PF08241 Methyltransferase domain L2D31_12180 PF09501 Probable sporulation protein (Bac_small_yrzI) L2D31_12185 PF14143 YrhC-like protein L2D31_12190 PF01053 Cys/Met metabolism PLP-dependent enzyme L2D31_12195 PF00291 Pyridoxal-phosphate dependent enzyme L2D31_12200 PF01048 Phosphorylase superfamily L2D31_12205 PF13649 Methyltransferase domain L2D31_12210 PF10750 Protein of unknown function (DUF2536) L2D31_12215 PF07423 Domain of unknown function (DUF1510) L2D31_12220 PF03717 Penicillin-binding Protein dimerisation domain L2D31_12220 PF00905 Penicillin binding protein transpeptidase domain L2D31_12225 PF01272 Transcription elongation factor, GreA/GreB, C-term L2D31_12225 PF03449 Transcription elongation factor, N-terminal L2D31_12230 PF00485 Phosphoribulokinase / Uridine kinase family L2D31_12235 PF01136 Peptidase family U32 L2D31_12235 PF16325 Peptidase family U32 C-terminal domain L2D31_12240 PF01136 Peptidase family U32 L2D31_12245 PF01596 O-methyltransferase L2D31_12250 PF02618 YceG-like family L2D31_12255 PF02803 Thiolase, C-terminal domain L2D31_12255 PF00108 Thiolase, N-terminal domain L2D31_12260 PF13193 AMP-binding enzyme C-terminal domain L2D31_12260 PF00501 AMP-binding enzyme L2D31_12265 PF02632 BioY family L2D31_12270 PF06949 Protein of unknown function (DUF1292) L2D31_12275 PF03652 Holliday junction resolvase L2D31_12280 PF06135 IreB regulatory phosphoprotein L2D31_12285 PF02272 DHHA1 domain L2D31_12285 PF01411 tRNA synthetases class II (A) L2D31_12285 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain L2D31_12290 PF01594 AI-2E family transporter L2D31_12295 PF00005 ABC transporter L2D31_12300 PF00497 Bacterial extracellular solute-binding proteins, family 3 L2D31_12305 PF00528 Binding-protein-dependent transport system inner membrane component L2D31_12310 PF00528 Binding-protein-dependent transport system inner membrane component L2D31_12315 PF13056 Protein of unknown function (DUF3918) L2D31_12325 PF05239 PRC-barrel domain L2D31_12330 PF14490 Helix-hairpin-helix containing domain L2D31_12330 PF18335 ATP-dependent RecD-like DNA helicase SH3 domain L2D31_12330 PF13538 UvrD-like helicase C-terminal domain L2D31_12335 PF13181 Tetratricopeptide repeat L2D31_12335 PF07719 Tetratricopeptide repeat L2D31_12345 PF00266 Aminotransferase class-V L2D31_12350 PF02082 Transcriptional regulator L2D31_12355 PF16193 AAA C-terminal domain L2D31_12355 PF12002 MgsA AAA+ ATPase C terminal L2D31_12355 PF05496 Holliday junction DNA helicase RuvB P-loop domain L2D31_12360 PF00899 ThiF family L2D31_12370 PF00152 tRNA synthetases class II (D, K and N) L2D31_12370 PF02938 GAD domain L2D31_12370 PF01336 OB-fold nucleic acid binding domain L2D31_12375 PF13393 Histidyl-tRNA synthetase L2D31_12375 PF03129 Anticodon binding domain L2D31_12385 PF01520 N-acetylmuramoyl-L-alanine amidase L2D31_12385 PF08239 Bacterial SH3 domain L2D31_12390 PF02580 D-Tyr-tRNA(Tyr) deacylase L2D31_12395 PF13291 ACT domain L2D31_12395 PF04607 Region found in RelA / SpoT proteins L2D31_12395 PF02824 TGS domain L2D31_12400 PF00156 Phosphoribosyl transferase domain L2D31_12405 PF17768 RecJ OB domain L2D31_12405 PF10141 Single-strand DNA-specific exonuclease, C terminal domain L2D31_12405 PF01368 DHH family L2D31_12405 PF02272 DHHA1 domain L2D31_12410 PF06305 Lipopolysaccharide assembly protein A domain L2D31_12415 PF02080 TrkA-C domain L2D31_12420 PF02355 Protein export membrane protein L2D31_12420 PF07549 SecD/SecF GG Motif L2D31_12425 PF13797 Post-transcriptional regulator L2D31_12430 PF01943 Polysaccharide biosynthesis protein L2D31_12430 PF14667 Polysaccharide biosynthesis C-terminal domain L2D31_12435 PF04239 Protein of unknown function (DUF421) L2D31_12440 PF12670 Protein of unknown function (DUF3792) L2D31_12445 PF02699 Preprotein translocase subunit L2D31_12450 PF01702 Queuine tRNA-ribosyltransferase L2D31_12455 PF02547 Queuosine biosynthesis protein L2D31_12460 PF11146 Protein of unknown function (DUF2905) L2D31_12465 PF17864 RuvB AAA lid domain L2D31_12465 PF05491 RuvB C-terminal winged helix domain L2D31_12465 PF05496 Holliday junction DNA helicase RuvB P-loop domain L2D31_12470 PF07499 RuvA, C-terminal domain L2D31_12470 PF01330 RuvA N terminal domain L2D31_12475 PF08955 BofC C-terminal domain L2D31_12475 PF08977 Bypass of Forespore C, N terminal L2D31_12495 PF13667 ThiC-associated domain L2D31_12495 PF01964 Radical SAM ThiC family L2D31_12505 PF09580 Sporulation lipoprotein YhcN/YlaJ (Spore_YhcN_YlaJ) L2D31_12515 PF02445 Quinolinate synthetase A protein L2D31_12520 PF02749 Quinolinate phosphoribosyl transferase, N-terminal domain L2D31_12520 PF01729 Quinolinate phosphoribosyl transferase, C-terminal domain L2D31_12525 PF02910 Fumarate reductase flavoprotein C-term L2D31_12525 PF00890 FAD binding domain L2D31_12530 PF00266 Aminotransferase class-V L2D31_12535 PF02829 3H domain L2D31_12535 PF08279 HTH domain L2D31_12540 PF01842 ACT domain L2D31_12540 PF00800 Prephenate dehydratase L2D31_12545 PF01842 ACT domain L2D31_12550 PF01018 GTP1/OBG L2D31_12550 PF09269 Domain of unknown function (DUF1967) L2D31_12550 PF01926 50S ribosome-binding GTPase L2D31_12555 PF14689 Sensor_kinase_SpoOB-type, alpha-helical domain L2D31_12555 PF14682 Sporulation initiation phospho-transferase B, C-terminal L2D31_12560 PF01016 Ribosomal L27 protein L2D31_12565 PF04327 Cysteine protease Prp L2D31_12570 PF00829 Ribosomal prokaryotic L21 protein L2D31_12575 PF02163 Peptidase family M50 L2D31_12580 PF01551 Peptidase family M23 L2D31_12585 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain L2D31_12590 PF03775 Septum formation inhibitor MinC, C-terminal domain L2D31_12595 PF04093 rod shape-determining protein MreD L2D31_12600 PF04085 rod shape-determining protein MreC L2D31_12610 PF04002 RadC-like JAB domain L2D31_12615 PF02545 Maf-like protein L2D31_12625 PF01478 Type IV leader peptidase family L2D31_12625 PF06750 Bacterial Peptidase A24 N-terminal domain L2D31_12630 PF02875 Mur ligase family, glutamate ligase domain L2D31_12630 PF08245 Mur ligase middle domain L2D31_12635 PF00133 tRNA synthetases class I (I, L, M and V) L2D31_12635 PF10458 Valyl tRNA synthetase tRNA binding arm L2D31_12635 PF08264 Anticodon-binding domain of tRNA L2D31_12650 PF01476 LysM domain L2D31_12655 PF00202 Aminotransferase class-III L2D31_12660 PF00490 Delta-aminolevulinic acid dehydratase L2D31_12665 PF02602 Uroporphyrinogen-III synthase HemD L2D31_12670 PF01379 Porphobilinogen deaminase, dipyromethane cofactor binding domain L2D31_12670 PF03900 Porphobilinogen deaminase, C-terminal domain L2D31_12675 PF01578 Cytochrome C assembly protein L2D31_12680 PF00745 Glutamyl-tRNAGlu reductase, dimerisation domain L2D31_12680 PF05201 Glutamyl-tRNAGlu reductase, N-terminal domain L2D31_12680 PF01488 Shikimate / quinate 5-dehydrogenase L2D31_12690 PF01926 50S ribosome-binding GTPase L2D31_12695 PF00004 ATPase family associated with various cellular activities (AAA) L2D31_12695 PF05362 Lon protease (S16) C-terminal proteolytic domain L2D31_12695 PF02190 ATP-dependent protease La (LON) substrate-binding domain L2D31_12700 PF00004 ATPase family associated with various cellular activities (AAA) L2D31_12700 PF05362 Lon protease (S16) C-terminal proteolytic domain L2D31_12705 PF07724 AAA domain (Cdc48 subfamily) L2D31_12705 PF10431 C-terminal, D2-small domain, of ClpB protein L2D31_12705 PF06689 ClpX C4-type zinc finger L2D31_12710 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase L2D31_12710 PF05698 Bacterial trigger factor protein (TF) C-terminus L2D31_12710 PF05697 Bacterial trigger factor protein (TF) L2D31_12720 PF00694 Aconitase C-terminal domain L2D31_12725 PF00330 Aconitase family (aconitate hydratase) L2D31_12730 PF00180 Isocitrate/isopropylmalate dehydrogenase L2D31_12735 PF00682 HMGL-like L2D31_12735 PF08502 LeuA allosteric (dimerisation) domain L2D31_12740 PF01450 Acetohydroxy acid isomeroreductase, catalytic domain L2D31_12740 PF07991 Acetohydroxy acid isomeroreductase, NADPH-binding domain L2D31_12745 PF01842 ACT domain L2D31_12745 PF10369 Small subunit of acetolactate synthase L2D31_12750 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain L2D31_12750 PF00205 Thiamine pyrophosphate enzyme, central domain L2D31_12750 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain L2D31_12755 PF01063 Amino-transferase class IV L2D31_12760 PF10282 Lactonase, 7-bladed beta-propeller L2D31_12765 PF06803 Protein of unknown function (DUF1232) L2D31_12770 PF04914 DltD protein L2D31_12775 PF00550 Phosphopantetheine attachment site L2D31_12780 PF03062 MBOAT, membrane-bound O-acyltransferase family L2D31_12785 PF13193 AMP-binding enzyme C-terminal domain L2D31_12785 PF00501 AMP-binding enzyme L2D31_12790 PF12459 D-Ala-teichoic acid biosynthesis protein L2D31_12805 PF00145 C-5 cytosine-specific DNA methylase L2D31_12825 PF12850 Calcineurin-like phosphoesterase superfamily domain L2D31_12830 PF01725 Ham1 family L2D31_12835 PF03725 3' exoribonuclease family, domain 2 L2D31_12835 PF01138 3' exoribonuclease family, domain 1 L2D31_12840 PF10646 Sporulation and spore germination L2D31_12845 PF01177 Asp/Glu/Hydantoin racemase L2D31_12850 PF01047 MarR family L2D31_12855 PF00196 Bacterial regulatory proteins, luxR family L2D31_12860 PF03600 Citrate transporter L2D31_12865 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family L2D31_12865 PF03466 LysR substrate binding domain L2D31_12870 PF04303 PrpF protein L2D31_12875 PF02237 Biotin protein ligase C terminal domain L2D31_12875 PF03099 Biotin/lipoate A/B protein ligase family L2D31_12880 PF03061 Thioesterase superfamily L2D31_12885 PF13085 2Fe-2S iron-sulfur cluster binding domain L2D31_12885 PF13183 4Fe-4S dicluster domain L2D31_12890 PF00890 FAD binding domain L2D31_12890 PF02910 Fumarate reductase flavoprotein C-term L2D31_12895 PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit L2D31_12900 PF10702 Protein of unknown function (DUF2507) L2D31_12905 PF13840 ACT domain L2D31_12905 PF01842 ACT domain L2D31_12905 PF00696 Amino acid kinase family L2D31_12910 PF02151 UvrB/uvrC motif L2D31_12910 PF08459 UvrC Helix-hairpin-helix N-terminal L2D31_12910 PF01541 GIY-YIG catalytic domain L2D31_12915 PF00085 Thioredoxin L2D31_12920 PF06964 Alpha-L-arabinofuranosidase C-terminal domain L2D31_12925 PF01012 Electron transfer flavoprotein domain L2D31_12925 PF00766 Electron transfer flavoprotein FAD-binding domain L2D31_12930 PF01012 Electron transfer flavoprotein domain L2D31_12935 PF00378 Enoyl-CoA hydratase/isomerase L2D31_12940 PF08359 YsiA-like protein, C-terminal region L2D31_12940 PF00440 Bacterial regulatory proteins, tetR family L2D31_12945 PF13193 AMP-binding enzyme C-terminal domain L2D31_12945 PF00501 AMP-binding enzyme L2D31_12955 PF03994 Domain of Unknown Function (DUF350) L2D31_12960 PF01713 Smr domain L2D31_12960 PF00488 MutS domain V L2D31_12965 PF14791 DNA polymerase beta thumb L2D31_12965 PF14716 Helix-hairpin-helix domain L2D31_12965 PF02811 PHP domain L2D31_12970 PF02674 Colicin V production protein L2D31_12975 PF05164 Cell division protein ZapA L2D31_12980 PF11858 Domain of unknown function (DUF3378) L2D31_12980 PF01351 Ribonuclease HII L2D31_12985 PF03483 B3/4 domain L2D31_12985 PF03484 tRNA synthetase B5 domain L2D31_12985 PF17759 Phenylalanyl tRNA synthetase beta chain CLM domain L2D31_12985 PF01588 Putative tRNA binding domain L2D31_12985 PF03147 Ferredoxin-fold anticodon binding domain L2D31_12990 PF01409 tRNA synthetases class II core domain (F) L2D31_12990 PF02912 Aminoacyl tRNA synthetase class II, N-terminal domain L2D31_12995 PF08032 RNA 2'-O ribose methyltransferase substrate binding L2D31_12995 PF00588 SpoU rRNA Methylase family L2D31_13000 PF14098 Small, acid-soluble spore protein I L2D31_13005 PF02554 Carbon starvation protein CstA L2D31_13005 PF13722 5TM C-terminal transporter carbon starvation CstA L2D31_13010 PF05343 M42 glutamyl aminopeptidase L2D31_13020 PF06961 Protein of unknown function (DUF1294) L2D31_13025 PF00453 Ribosomal protein L20 L2D31_13030 PF01632 Ribosomal protein L35 L2D31_13035 PF05198 Translation initiation factor IF-3, N-terminal domain L2D31_13035 PF00707 Translation initiation factor IF-3, C-terminal domain L2D31_13040 PF04172 LrgB-like family L2D31_13045 PF03788 LrgA family L2D31_13050 PF00072 Response regulator receiver domain L2D31_13050 PF04397 LytTr DNA-binding domain L2D31_13055 PF07694 5TMR of 5TMR-LYT L2D31_13055 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase L2D31_13055 PF06580 Histidine kinase L2D31_13060 PF13419 Haloacid dehalogenase-like hydrolase L2D31_13065 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain L2D31_13065 PF08447 PAS fold L2D31_13065 PF13426 PAS domain L2D31_13070 PF02824 TGS domain L2D31_13070 PF03129 Anticodon binding domain L2D31_13070 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) L2D31_13070 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain L2D31_13075 PF08812 YtxC-like family L2D31_13080 PF09335 SNARE associated Golgi protein L2D31_13085 PF07319 Primosomal protein DnaI N-terminus L2D31_13085 PF01695 IstB-like ATP binding protein L2D31_13090 PF07261 Replication initiation and membrane attachment L2D31_13095 PF03477 ATP cone domain L2D31_13105 PF02675 S-adenosylmethionine decarboxylase L2D31_13110 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain L2D31_13110 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain L2D31_13115 PF01121 Dephospho-CoA kinase L2D31_13120 PF02659 Putative manganese efflux pump L2D31_13125 PF01149 Formamidopyrimidine-DNA glycosylase N-terminal domain L2D31_13125 PF06831 Formamidopyrimidine-DNA glycosylase H2TH domain L2D31_13125 PF06827 Zinc finger found in FPG and IleRS L2D31_13130 PF01367 5'-3' exonuclease, C-terminal SAM fold L2D31_13130 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain L2D31_13130 PF00476 DNA polymerase family A L2D31_13135 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase L2D31_13135 PF00512 His Kinase A (phospho-acceptor) domain L2D31_13135 PF00989 PAS fold L2D31_13135 PF16736 Single Cache-like L2D31_13140 PF00072 Response regulator receiver domain L2D31_13140 PF00486 Transcriptional regulatory protein, C terminal L2D31_13145 PF02866 lactate/malate dehydrogenase, alpha/beta C-terminal domain L2D31_13145 PF00056 lactate/malate dehydrogenase, NAD binding domain L2D31_13150 PF00180 Isocitrate/isopropylmalate dehydrogenase L2D31_13155 PF00285 Citrate synthase, C-terminal domain L2D31_13160 PF04284 Protein of unknown function (DUF441) L2D31_13165 PF01594 AI-2E family transporter L2D31_13170 PF04186 FxsA cytoplasmic membrane protein L2D31_13175 PF02887 Pyruvate kinase, alpha/beta domain L2D31_13175 PF00224 Pyruvate kinase, barrel domain L2D31_13175 PF00391 PEP-utilising enzyme, mobile domain L2D31_13180 PF00365 Phosphofructokinase L2D31_13185 PF03255 Acetyl co-enzyme A carboxylase carboxyltransferase alpha subunit L2D31_13190 PF01039 Carboxyl transferase domain L2D31_13190 PF17848 Acetyl-coA carboxylase zinc finger domain L2D31_13195 PF00390 Malic enzyme, N-terminal domain L2D31_13195 PF03949 Malic enzyme, NAD binding domain L2D31_13200 PF01336 OB-fold nucleic acid binding domain L2D31_13200 PF02811 PHP domain L2D31_13200 PF14579 Helix-hairpin-helix motif L2D31_13200 PF17657 Bacterial DNA polymerase III alpha subunit finger domain L2D31_13200 PF07733 Bacterial DNA polymerase III alpha NTPase domain L2D31_13205 PF14034 Sporulation protein YtrH L2D31_13220 PF01368 DHH family L2D31_13220 PF02272 DHHA1 domain L2D31_13225 PF14007 YtpI-like protein L2D31_13230 PF03061 Thioesterase superfamily L2D31_13230 PF00571 CBS domain L2D31_13230 PF07085 DRTGG domain L2D31_13230 PF00392 Bacterial regulatory proteins, gntR family L2D31_13250 PF00206 Lyase L2D31_13250 PF14698 Argininosuccinate lyase C-terminal L2D31_13255 PF00764 Arginosuccinate synthase L2D31_13260 PF00994 Probable molybdopterin binding domain L2D31_13265 PF00871 Acetokinase family L2D31_13270 PF02384 N-6 DNA Methylase L2D31_13275 PF08534 Redoxin L2D31_13280 PF09579 Sporulation protein YtfJ (Spore_YtfJ) L2D31_13285 PF11167 Protein of unknown function (DUF2953) L2D31_13290 PF06271 RDD family L2D31_13295 PF01343 Peptidase family S49 L2D31_13300 PF01513 ATP-NAD kinase L2D31_13305 PF03880 DbpA RNA binding domain L2D31_13305 PF00271 Helicase conserved C-terminal domain L2D31_13305 PF00270 DEAD/DEAH box helicase L2D31_13310 PF00487 Fatty acid desaturase L2D31_13315 PF07730 Histidine kinase L2D31_13320 PF00072 Response regulator receiver domain L2D31_13320 PF00196 Bacterial regulatory proteins, luxR family L2D31_13325 PF01497 Periplasmic binding protein L2D31_13330 PF00072 Response regulator receiver domain L2D31_13330 PF00486 Transcriptional regulatory protein, C terminal L2D31_13335 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase L2D31_13340 PF01098 Cell cycle protein L2D31_13345 PF03551 Transcriptional regulator PadR-like family L2D31_13350 PF00005 ABC transporter L2D31_13355 PF02687 FtsX-like permease family L2D31_13360 PF01979 Amidohydrolase family L2D31_13365 PF02525 Flavodoxin-like fold L2D31_13380 PF01810 LysE type translocator L2D31_13385 PF13193 AMP-binding enzyme C-terminal domain L2D31_13385 PF00501 AMP-binding enzyme L2D31_13390 PF00269 Small, acid-soluble spore proteins, alpha/beta type L2D31_13395 PF02568 Thiamine biosynthesis protein (ThiI) L2D31_13395 PF02926 THUMP domain L2D31_13400 PF00266 Aminotransferase class-V L2D31_13405 PF05525 Branched-chain amino acid transport protein L2D31_13410 PF05525 Branched-chain amino acid transport protein L2D31_13415 PF06160 Septation ring formation regulator, EzrA L2D31_13420 PF02811 PHP domain L2D31_13425 PF00440 Bacterial regulatory proteins, tetR family L2D31_13430 PF13185 GAF domain L2D31_13435 PF00163 Ribosomal protein S4/S9 N-terminal domain L2D31_13435 PF01479 S4 domain L2D31_13450 PF00857 Isochorismatase family L2D31_13460 PF01674 Lipase (class 2) L2D31_13470 PF00579 tRNA synthetases class I (W and Y) L2D31_13470 PF01479 S4 domain L2D31_13475 PF00501 AMP-binding enzyme L2D31_13475 PF13193 AMP-binding enzyme C-terminal domain L2D31_13480 PF00583 Acetyltransferase (GNAT) family L2D31_13485 PF00571 CBS domain L2D31_13490 PF00850 Histone deacetylase domain L2D31_13495 PF00356 Bacterial regulatory proteins, lacI family L2D31_13500 PF00793 DAHP synthetase I family L2D31_13500 PF01817 Chorismate mutase type II L2D31_13505 PF11009 Protein of unknown function (DUF2847) L2D31_13510 PF12732 YtxH-like protein L2D31_13515 PF06103 Bacterial protein of unknown function (DUF948) L2D31_13520 PF02875 Mur ligase family, glutamate ligase domain L2D31_13520 PF08245 Mur ligase middle domain L2D31_13520 PF01225 Mur ligase family, catalytic domain L2D31_13525 PF17854 FtsK alpha domain L2D31_13525 PF09397 Ftsk gamma domain L2D31_13525 PF01580 FtsK/SpoIIIE family L2D31_13530 PF14794 Domain of unknown function (DUF4479) L2D31_13530 PF01588 Putative tRNA binding domain L2D31_13535 PF07285 Protein of unknown function (DUF1444) L2D31_13540 PF00085 Thioredoxin L2D31_13550 PF11071 Nucleoside 2-deoxyribosyltransferase YtoQ L2D31_13555 PF05343 M42 glutamyl aminopeptidase L2D31_13560 PF03413 Peptidase propeptide and YPEB domain L2D31_13565 PF00390 Malic enzyme, N-terminal domain L2D31_13565 PF03949 Malic enzyme, NAD binding domain L2D31_13570 PF00753 Metallo-beta-lactamase superfamily L2D31_13575 PF02390 Putative methyltransferase L2D31_13580 PF14165 YtzH-like protein L2D31_13585 PF01636 Phosphotransferase enzyme family L2D31_13590 PF00781 Diacylglycerol kinase catalytic domain L2D31_13605 PF00291 Pyridoxal-phosphate dependent enzyme L2D31_13610 PF03575 Peptidase family S51 L2D31_13615 PF01546 Peptidase family M20/M25/M40 L2D31_13620 PF00860 Permease family L2D31_13625 PF08220 DeoR-like helix-turn-helix domain L2D31_13630 PF00849 RNA pseudouridylate synthase L2D31_13630 PF01479 S4 domain L2D31_13635 PF14667 Polysaccharide biosynthesis C-terminal domain L2D31_13635 PF01943 Polysaccharide biosynthesis protein L2D31_13650 PF02028 BCCT, betaine/carnitine/choline family transporter L2D31_13655 PF03691 Uncharacterised protein family (UPF0167) L2D31_13660 PF10957 Sporulation protein Cse60 L2D31_13665 PF00581 Rhodanese-like domain L2D31_13670 PF04854 Protein of unknown function, DUF624 L2D31_13675 PF01408 Oxidoreductase family, NAD-binding Rossmann fold L2D31_13675 PF02894 Oxidoreductase family, C-terminal alpha/beta domain L2D31_13685 PF07470 Glycosyl Hydrolase Family 88 L2D31_13690 PF00528 Binding-protein-dependent transport system inner membrane component L2D31_13695 PF12833 Helix-turn-helix domain L2D31_13695 PF17853 GGDEF-like domain L2D31_13700 PF01638 HxlR-like helix-turn-helix L2D31_13705 PF07690 Major Facilitator Superfamily L2D31_13710 PF00248 Aldo/keto reductase family L2D31_13715 PF13416 Bacterial extracellular solute-binding protein L2D31_13720 PF00528 Binding-protein-dependent transport system inner membrane component L2D31_13725 PF01370 NAD dependent epimerase/dehydratase family L2D31_13730 PF01738 Dienelactone hydrolase family L2D31_13735 PF13603 Leucyl-tRNA synthetase, Domain 2 L2D31_13735 PF00133 tRNA synthetases class I (I, L, M and V) L2D31_13735 PF08264 Anticodon-binding domain of tRNA L2D31_13735 PF09334 tRNA synthetases class I (M) L2D31_13740 PF14074 Protein of unknown function (DUF4257) L2D31_13745 PF13426 PAS domain L2D31_13745 PF01740 STAS domain L2D31_13750 PF04791 LMBR1-like membrane protein L2D31_13755 PF02687 FtsX-like permease family L2D31_13755 PF12704 MacB-like periplasmic core domain L2D31_13760 PF00005 ABC transporter L2D31_13770 PF00005 ABC transporter L2D31_13775 PF00392 Bacterial regulatory proteins, gntR family L2D31_13795 PF10732 Protein of unknown function (DUF2524) L2D31_13800 PF16199 Radical_SAM C-terminal domain L2D31_13800 PF04055 Radical SAM superfamily L2D31_13805 PF06962 Putative rRNA methylase L2D31_13810 PF07070 SpoOM protein L2D31_13815 PF10776 Protein of unknown function (DUF2600) L2D31_13820 PF12146 Serine aminopeptidase, S33 L2D31_13825 PF00132 Bacterial transferase hexapeptide (six repeats) L2D31_13830 PF13537 Glutamine amidotransferase domain L2D31_13830 PF00733 Asparagine synthase L2D31_13835 PF02773 S-adenosylmethionine synthetase, C-terminal domain L2D31_13835 PF02772 S-adenosylmethionine synthetase, central domain L2D31_13835 PF00438 S-adenosylmethionine synthetase, N-terminal domain L2D31_13840 PF01293 Phosphoenolpyruvate carboxykinase L2D31_13845 PF10763 Protein of unknown function (DUF2584) L2D31_13850 PF00326 Prolyl oligopeptidase family L2D31_13855 PF01593 Flavin containing amine oxidoreductase L2D31_13860 PF00535 Glycosyl transferase family 2 L2D31_13880 PF00005 ABC transporter L2D31_13885 PF00528 Binding-protein-dependent transport system inner membrane component L2D31_13890 PF00293 NUDIX domain L2D31_13895 PF02342 TerD domain L2D31_13910 PF05105 Bacteriophage holin family L2D31_13920 PF00210 Ferritin-like domain L2D31_13930 PF13115 YtkA-like L2D31_13935 PF02664 S-Ribosylhomocysteinase (LuxS) L2D31_13940 PF01809 Putative membrane protein insertion efficiency factor L2D31_13945 PF00484 Carbonic anhydrase L2D31_13950 PF09223 ZinT (YodA) periplasmic lipocalin-like zinc-recruitment L2D31_13950 PF01297 Zinc-uptake complex component A periplasmic L2D31_13955 PF01197 Ribosomal protein L31 L2D31_13960 PF01654 Cytochrome bd terminal oxidase subunit I L2D31_13965 PF02322 Cytochrome bd terminal oxidase subunit II L2D31_13970 PF07561 Domain of Unknown Function (DUF1540) L2D31_13980 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain L2D31_13980 PF13378 Enolase C-terminal domain-like L2D31_13985 PF13193 AMP-binding enzyme C-terminal domain L2D31_13985 PF00501 AMP-binding enzyme L2D31_13990 PF00378 Enoyl-CoA hydratase/isomerase L2D31_13995 PF00561 alpha/beta hydrolase fold L2D31_14000 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain L2D31_14000 PF16582 Middle domain of thiamine pyrophosphate L2D31_14000 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain L2D31_14005 PF00425 chorismate binding enzyme L2D31_14010 PF01040 UbiA prenyltransferase family L2D31_14015 PF01258 Prokaryotic dksA/traR C4-type zinc finger L2D31_14020 PF03073 TspO/MBR family L2D31_14145 PF09515 Thiamine transporter protein (Thia_YuaJ) L2D31_14150 PF00583 Acetyltransferase (GNAT) family L2D31_14155 PF06803 Protein of unknown function (DUF1232) L2D31_14160 PF01098 Cell cycle protein L2D31_14165 PF01098 Cell cycle protein L2D31_14170 PF01145 SPFH domain / Band 7 family L2D31_14170 PF15975 Flotillin L2D31_14180 PF12867 DinB superfamily L2D31_14185 PF00465 Iron-containing alcohol dehydrogenase L2D31_14190 PF00171 Aldehyde dehydrogenase family L2D31_14210 PF01510 N-acetylmuramoyl-L-alanine amidase L2D31_14210 PF01471 Putative peptidoglycan binding domain L2D31_14215 PF04688 SPP1 phage holin L2D31_14220 PF10960 BhlA holin family L2D31_14245 PF09693 Phage uncharacterised protein (Phage_XkdX) L2D31_14250 PF09636 XkdW protein L2D31_14265 PF10076 Uncharacterised protein conserved in bacteria (DUF2313) L2D31_14270 PF04865 Baseplate J-like protein L2D31_14275 PF10934 Protein of unknown function (DUF2634) L2D31_14280 PF10844 Protein of unknown function (DUF2577) L2D31_14290 PF01476 LysM domain L2D31_14295 PF01464 Transglycosylase SLT domain L2D31_14295 PF01464 Transglycosylase SLT domain L2D31_14305 PF08890 Phage XkdN-like tail assembly chaperone protein, TAC L2D31_14315 PF09393 Phage tail tube protein L2D31_14320 PF04984 Phage tail sheath protein subtilisin-like domain L2D31_14320 PF17482 Phage tail sheath C-terminal domain L2D31_14320 PF17481 Phage tail sheath protein beta-sandwich domain L2D31_14335 PF04883 Bacteriophage HK97-gp10, putative tail-component L2D31_14340 PF12206 Domain of unknown function (DUF3599) L2D31_14345 PF11436 Protein of unknown function (DUF3199) L2D31_14350 PF05065 Phage capsid family L2D31_14355 PF14550 Putative phage serine protease XkdF L2D31_14360 PF04860 Phage portal protein L2D31_14365 PF04466 Phage terminase large subunit L2D31_14365 PF17288 Terminase RNAseH like domain L2D31_14370 PF10668 Phage terminase small subunit L2D31_14375 PF08281 Sigma-70, region 4 L2D31_14380 PF17356 Phage-like element PBSX protein XtrA L2D31_14385 PF05866 Endodeoxyribonuclease RusA L2D31_14405 PF01381 Helix-turn-helix L2D31_14415 PF06968 Biotin and Thiamin Synthesis associated domain L2D31_14415 PF04055 Radical SAM superfamily L2D31_14425 PF02673 Bacitracin resistance protein BacA L2D31_14430 PF01594 AI-2E family transporter L2D31_14440 PF01408 Oxidoreductase family, NAD-binding Rossmann fold L2D31_14440 PF02894 Oxidoreductase family, C-terminal alpha/beta domain L2D31_14445 PF01965 DJ-1/PfpI family L2D31_14450 PF02743 Cache domain L2D31_14450 PF00672 HAMP domain L2D31_14450 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain L2D31_14455 PF02743 Cache domain L2D31_14455 PF00672 HAMP domain L2D31_14455 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain L2D31_14460 PF02743 Cache domain L2D31_14460 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain L2D31_14460 PF00672 HAMP domain L2D31_14465 PF02743 Cache domain L2D31_14465 PF00672 HAMP domain L2D31_14465 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain L2D31_14480 PF03060 Nitronate monooxygenase L2D31_14485 PF01894 Uncharacterised protein family UPF0047 L2D31_14490 PF03471 Transporter associated domain L2D31_14490 PF00571 CBS domain L2D31_14490 PF01595 Cyclin M transmembrane N-terminal domain L2D31_14495 PF04298 Putative neutral zinc metallopeptidase L2D31_14505 PF07885 Ion channel L2D31_14505 PF02254 TrkA-N domain L2D31_14510 PF08868 YugN-like family L2D31_14520 PF00342 Phosphoglucose isomerase L2D31_14525 PF00465 Iron-containing alcohol dehydrogenase L2D31_14530 PF00465 Iron-containing alcohol dehydrogenase L2D31_14535 PF04070 Domain of unknown function (DUF378) L2D31_14540 PF00575 S1 RNA binding domain L2D31_14545 PF00155 Aminotransferase class I and II L2D31_14550 PF01037 Lrp/AsnC ligand binding domain L2D31_14555 PF00561 alpha/beta hydrolase fold L2D31_14555 PF08386 TAP-like protein L2D31_14560 PF08958 Domain of unknown function (DUF1871) L2D31_14570 PF00512 His Kinase A (phospho-acceptor) domain L2D31_14570 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase L2D31_14580 PF08810 Kinase associated protein B L2D31_14585 PF00929 Exonuclease L2D31_14590 PF07690 Major Facilitator Superfamily L2D31_14595 PF00912 Transglycosylase L2D31_14595 PF00905 Penicillin binding protein transpeptidase domain L2D31_14600 PF04134 Protein of unknown function, DUF393 L2D31_14605 PF17328 Family of unknown function (DUF5366) L2D31_14610 PF17203 Single cache domain 3 L2D31_14610 PF14689 Sensor_kinase_SpoOB-type, alpha-helical domain L2D31_14610 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase L2D31_14610 PF00989 PAS fold L2D31_14615 PF00072 Response regulator receiver domain L2D31_14620 PF02608 ABC transporter substrate-binding protein PnrA-like L2D31_14625 PF00005 ABC transporter L2D31_14630 PF02653 Branched-chain amino acid transport system / permease component L2D31_14635 PF02653 Branched-chain amino acid transport system / permease component L2D31_14640 PF03390 2-hydroxycarboxylate transporter family L2D31_14650 PF13244 Domain of unknown function (DUF4040) L2D31_14650 PF00361 Proton-conducting membrane transporter L2D31_14650 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus L2D31_14655 PF04039 Domain related to MnhB subunit of Na+/H+ antiporter L2D31_14660 PF00420 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L L2D31_14665 PF00361 Proton-conducting membrane transporter L2D31_14670 PF01899 Na+/H+ ion antiporter subunit L2D31_14675 PF04066 Multiple resistance and pH regulation protein F (MrpF / PhaF) L2D31_14680 PF03334 Na+/H+ antiporter subunit L2D31_14685 PF03061 Thioesterase superfamily L2D31_14690 PF00072 Response regulator receiver domain L2D31_14690 PF00196 Bacterial regulatory proteins, luxR family L2D31_14695 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase L2D31_14695 PF07730 Histidine kinase L2D31_14705 PF00348 Polyprenyl synthetase L2D31_14710 PF08181 DegQ (SacQ) family L2D31_14720 PF00563 EAL domain L2D31_14720 PF08668 HDOD domain L2D31_14725 PF17956 Nicotinate phosphoribosyltransferase C-terminal domain L2D31_14725 PF17767 Nicotinate phosphoribosyltransferase (NAPRTase) N-terminal domain L2D31_14725 PF04095 Nicotinate phosphoribosyltransferase (NAPRTase) family L2D31_14730 PF00857 Isochorismatase family L2D31_14735 PF07997 Protein of unknown function (DUF1694) L2D31_14740 PF14166 YueH-like protein L2D31_14745 PF10676 Spore germination protein gerPA/gerPF L2D31_14750 PF10676 Spore germination protein gerPA/gerPF L2D31_14755 PF01594 AI-2E family transporter L2D31_14760 PF10842 Protein of unknown function (DUF2642) L2D31_14770 PF01966 HD domain L2D31_14775 PF00106 short chain dehydrogenase L2D31_14780 PF17355 Family of unknown function (DUF5383) L2D31_14790 PF01580 FtsK/SpoIIIE family L2D31_14790 PF12538 DNA transporter L2D31_14795 PF10140 WXG100 protein secretion system (Wss), protein YukC L2D31_14800 PF08817 WXG100 protein secretion system (Wss), protein YukD L2D31_14805 PF06013 Proteins of 100 residues with WXG L2D31_14810 PF13556 PucR C-terminal helix-turn-helix domain L2D31_14810 PF17853 GGDEF-like domain L2D31_14810 PF06018 CodY GAF-like domain L2D31_14815 PF01262 Alanine dehydrogenase/PNT, C-terminal domain L2D31_14815 PF05222 Alanine dehydrogenase/PNT, N-terminal domain L2D31_14820 PF02632 BioY family L2D31_14825 PF13726 Na+-H+ antiporter family L2D31_14825 PF03553 Na+/H+ antiporter family L2D31_14830 PF00883 Cytosol aminopeptidase family, catalytic domain L2D31_14830 PF02789 Cytosol aminopeptidase family, N-terminal domain L2D31_14840 PF02681 Divergent PAP2 family L2D31_14845 PF06725 3D domain L2D31_14850 PF14068 Putative membrane protein L2D31_14855 PF17302 Family of unknown function (DUF5351) L2D31_14860 PF07992 Pyridine nucleotide-disulphide oxidoreductase L2D31_14865 PF07992 Pyridine nucleotide-disulphide oxidoreductase L2D31_14885 PF01521 Iron-sulphur cluster biosynthesis L2D31_14890 PF01678 Diaminopimelate epimerase L2D31_14895 PF07293 Protein of unknown function (DUF1450) L2D31_14900 PF07992 Pyridine nucleotide-disulphide oxidoreductase L2D31_14910 PF07315 Protein of unknown function (DUF1462) L2D31_14920 PF00326 Prolyl oligopeptidase family L2D31_14920 PF07676 WD40-like Beta Propeller Repeat L2D31_14925 PF00288 GHMP kinases N terminal domain L2D31_14925 PF08544 GHMP kinases C terminal L2D31_14930 PF00291 Pyridoxal-phosphate dependent enzyme L2D31_14935 PF03447 Homoserine dehydrogenase, NAD binding domain L2D31_14935 PF00742 Homoserine dehydrogenase L2D31_14935 PF01842 ACT domain L2D31_14940 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain L2D31_14940 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain L2D31_14950 PF04608 Phosphatidylglycerophosphatase A L2D31_14955 PF13344 Haloacid dehalogenase-like hydrolase L2D31_14960 PF01934 Protein of unknown function DUF86 L2D31_14965 PF06265 Protein of unknown function (DUF1027) L2D31_14970 PF09580 Sporulation lipoprotein YhcN/YlaJ (Spore_YhcN_YlaJ) L2D31_14975 PF16881 N-terminal domain of lipoyl synthase of Radical_SAM family L2D31_14975 PF04055 Radical SAM superfamily L2D31_14980 PF01551 Peptidase family M23 L2D31_14995 PF09560 Sporulation protein YunB (Spo_YunB) L2D31_15000 PF08827 Domain of unknown function (DUF1805) L2D31_15005 PF02872 5'-nucleotidase, C-terminal domain L2D31_15010 PF01904 Protein of unknown function DUF72 L2D31_15015 PF17853 GGDEF-like domain L2D31_15015 PF13556 PucR C-terminal helix-turn-helix domain L2D31_15015 PF07905 Purine catabolism regulatory protein-like family L2D31_15020 PF00190 Cupin L2D31_15025 PF07690 Major Facilitator Superfamily L2D31_15030 PF00266 Aminotransferase class-V L2D31_15035 PF04231 Endonuclease I L2D31_15045 PF01032 FecCD transport family L2D31_15050 PF01032 FecCD transport family L2D31_15055 PF01497 Periplasmic binding protein L2D31_15075 PF06146 Phosphate-starvation-inducible E L2D31_15080 PF00512 His Kinase A (phospho-acceptor) domain L2D31_15085 PF00072 Response regulator receiver domain L2D31_15085 PF00486 Transcriptional regulatory protein, C terminal L2D31_15090 PF04235 Protein of unknown function (DUF418) L2D31_15105 PF02525 Flavodoxin-like fold L2D31_15110 PF01370 NAD dependent epimerase/dehydratase family L2D31_15110 PF08338 Domain of unknown function (DUF1731) L2D31_15115 PF18665 Tetracyclin repressor-like, C-terminal domain L2D31_15115 PF00440 Bacterial regulatory proteins, tetR family L2D31_15120 PF13021 Domain of unknown function (DUF3885) L2D31_15125 PF01458 Uncharacterized protein family (UPF0051) L2D31_15130 PF01592 NifU-like N terminal domain L2D31_15135 PF00266 Aminotransferase class-V L2D31_15140 PF01458 Uncharacterized protein family (UPF0051) L2D31_15145 PF00005 ABC transporter L2D31_15155 PF02627 Carboxymuconolactone decarboxylase family L2D31_15160 PF03180 NLPA lipoprotein L2D31_15165 PF00528 Binding-protein-dependent transport system inner membrane component L2D31_15170 PF09383 NIL domain L2D31_15170 PF00005 ABC transporter L2D31_15175 PF02036 SCP-2 sterol transfer family L2D31_15180 PF00085 Thioredoxin L2D31_15185 PF01751 Toprim domain L2D31_15190 PF10830 Protein of unknown function (DUF2553) L2D31_15195 PF01597 Glycine cleavage H-protein L2D31_15200 PF03960 ArsC family L2D31_15205 PF00441 Acyl-CoA dehydrogenase, C-terminal domain L2D31_15205 PF02770 Acyl-CoA dehydrogenase, middle domain L2D31_15205 PF02771 Acyl-CoA dehydrogenase, N-terminal domain L2D31_15210 PF00108 Thiolase, N-terminal domain L2D31_15210 PF02803 Thiolase, C-terminal domain L2D31_15215 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain L2D31_15215 PF00378 Enoyl-CoA hydratase/isomerase L2D31_15215 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain L2D31_15220 PF14115 YuzL-like protein L2D31_15230 PF07875 Coat F domain L2D31_15235 PF10835 Protein of unknown function (DUF2573) L2D31_15240 PF00005 ABC transporter L2D31_15250 PF00106 short chain dehydrogenase L2D31_15255 PF13180 PDZ domain L2D31_15260 PF00486 Transcriptional regulatory protein, C terminal L2D31_15260 PF00072 Response regulator receiver domain L2D31_15265 PF00672 HAMP domain L2D31_15265 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase L2D31_15265 PF00512 His Kinase A (phospho-acceptor) domain L2D31_15275 PF00440 Bacterial regulatory proteins, tetR family L2D31_15285 PF00206 Lyase L2D31_15285 PF10415 Fumarase C C-terminus L2D31_15290 PF13113 Protein of unknown function (DUF3970) L2D31_15295 PF03323 Bacillus/Clostridium GerA spore germination protein L2D31_15300 PF03845 Spore germination protein L2D31_15305 PF05504 Spore germination B3/ GerAC like, C-terminal L2D31_15315 PF00072 Response regulator receiver domain L2D31_15315 PF00196 Bacterial regulatory proteins, luxR family L2D31_15320 PF00672 HAMP domain L2D31_15320 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase L2D31_15320 PF07730 Histidine kinase L2D31_15325 PF09922 Cell wall-active antibiotics response 4TMS YvqF L2D31_15335 PF04012 PspA/IM30 family L2D31_15345 PF12833 Helix-turn-helix domain L2D31_15350 PF00296 Luciferase-like monooxygenase L2D31_15355 PF01497 Periplasmic binding protein L2D31_15360 PF07992 Pyridine nucleotide-disulphide oxidoreductase L2D31_15365 PF01923 Cobalamin adenosyltransferase L2D31_15375 PF04166 Pyridoxal phosphate biosynthetic protein PdxA L2D31_15380 PF17042 Nucleotide-binding C-terminal domain L2D31_15380 PF07005 Sugar-binding N-terminal domain L2D31_15385 PF02954 Bacterial regulatory protein, Fis family L2D31_15385 PF00072 Response regulator receiver domain L2D31_15385 PF00158 Sigma-54 interaction domain L2D31_15400 PF00465 Iron-containing alcohol dehydrogenase L2D31_15405 PF00701 Dihydrodipicolinate synthetase family L2D31_15410 PF00005 ABC transporter L2D31_15415 PF01032 FecCD transport family L2D31_15420 PF01497 Periplasmic binding protein L2D31_15425 PF00295 Glycosyl hydrolases family 28 L2D31_15430 PF04295 D-galactarate dehydratase / Altronate hydrolase, C terminus L2D31_15430 PF08666 SAF domain L2D31_15435 PF01232 Mannitol dehydrogenase Rossmann domain L2D31_15435 PF08125 Mannitol dehydrogenase C-terminal domain L2D31_15440 PF00356 Bacterial regulatory proteins, lacI family L2D31_15445 PF02614 Glucuronate isomerase L2D31_15450 PF00512 His Kinase A (phospho-acceptor) domain L2D31_15450 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase L2D31_15455 PF00072 Response regulator receiver domain L2D31_15455 PF00486 Transcriptional regulatory protein, C terminal L2D31_15460 PF00005 ABC transporter L2D31_15465 PF01032 FecCD transport family L2D31_15470 PF01032 FecCD transport family L2D31_15475 PF01497 Periplasmic binding protein L2D31_15480 PF13520 Amino acid permease L2D31_15485 PF09575 Small spore protein J (Spore_SspJ) L2D31_15495 PF04307 LexA-binding, inner membrane-associated putative hydrolase L2D31_15500 PF00884 Sulfatase L2D31_15510 PF00528 Binding-protein-dependent transport system inner membrane component L2D31_15515 PF00248 Aldo/keto reductase family L2D31_15520 PF00480 ROK family L2D31_15525 PF00999 Sodium/hydrogen exchanger family L2D31_15530 PF03458 UPF0126 domain L2D31_15535 PF02600 Disulfide bond formation protein DsbB L2D31_15540 PF13462 Thioredoxin L2D31_15545 PF00403 Heavy-metal-associated domain L2D31_15550 PF00005 ABC transporter L2D31_15555 PF00950 ABC 3 transport family L2D31_15560 PF01297 Zinc-uptake complex component A periplasmic L2D31_15570 PF13977 BetI-type transcriptional repressor, C-terminal L2D31_15570 PF00440 Bacterial regulatory proteins, tetR family L2D31_15575 PF00072 Response regulator receiver domain L2D31_15575 PF08664 YcbB domain L2D31_15580 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase L2D31_15585 PF00206 Lyase L2D31_15585 PF10415 Fumarase C C-terminus L2D31_15590 PF00375 Sodium:dicarboxylate symporter family L2D31_15595 PF00403 Heavy-metal-associated domain L2D31_15600 PF00403 Heavy-metal-associated domain L2D31_15605 PF02583 Metal-sensitive transcriptional repressor L2D31_15615 PF00990 Diguanylate cyclase, GGDEF domain L2D31_15615 PF00072 Response regulator receiver domain L2D31_15635 PF01668 SmpB protein L2D31_15640 PF17876 Cold shock domain L2D31_15640 PF08206 Ribonuclease B OB domain L2D31_15640 PF00773 RNB domain L2D31_15640 PF00575 S1 RNA binding domain L2D31_15645 PF12146 Serine aminopeptidase, S33 L2D31_15650 PF03840 Preprotein translocase SecG subunit L2D31_15655 PF18277 AbrB C-terminal domain L2D31_15655 PF04014 Antidote-toxin recognition MazE, bacterial antitoxin L2D31_15660 PF01381 Helix-turn-helix L2D31_15675 PF01638 HxlR-like helix-turn-helix L2D31_15680 PF00528 Binding-protein-dependent transport system inner membrane component L2D31_15685 PF04069 Substrate binding domain of ABC-type glycine betaine transport system L2D31_15690 PF00528 Binding-protein-dependent transport system inner membrane component L2D31_15695 PF00571 CBS domain L2D31_15695 PF00005 ABC transporter L2D31_15700 PF12802 MarR family L2D31_15705 PF01914 MarC family integral membrane protein L2D31_15715 PF00583 Acetyltransferase (GNAT) family L2D31_15735 PF00005 ABC transporter L2D31_15745 PF00113 Enolase, C-terminal TIM barrel domain L2D31_15745 PF03952 Enolase, N-terminal domain L2D31_15750 PF06415 BPG-independent PGAM N-terminus (iPGM_N) L2D31_15750 PF01676 Metalloenzyme superfamily L2D31_15755 PF00121 Triosephosphate isomerase L2D31_15760 PF00162 Phosphoglycerate kinase L2D31_15765 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain L2D31_15765 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain L2D31_15770 PF04198 Putative sugar-binding domain L2D31_15775 PF00324 Amino acid permease L2D31_15780 PF00202 Aminotransferase class-III L2D31_15785 PF02954 Bacterial regulatory protein, Fis family L2D31_15785 PF13426 PAS domain L2D31_15785 PF00158 Sigma-54 interaction domain L2D31_15790 PF07729 FCD domain L2D31_15790 PF00392 Bacterial regulatory proteins, gntR family L2D31_15795 PF00309 Sigma-54 factor, Activator interacting domain (AID) L2D31_15795 PF04963 Sigma-54 factor, core binding domain L2D31_15795 PF04552 Sigma-54, DNA binding domain L2D31_15800 PF09628 YvfG protein L2D31_15805 PF01554 MatE L2D31_15810 PF08352 Oligopeptide/dipeptide transporter, C-terminal region L2D31_15810 PF00005 ABC transporter L2D31_15815 PF08352 Oligopeptide/dipeptide transporter, C-terminal region L2D31_15815 PF00005 ABC transporter L2D31_15820 PF00528 Binding-protein-dependent transport system inner membrane component L2D31_15825 PF00528 Binding-protein-dependent transport system inner membrane component L2D31_15830 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle L2D31_15835 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family L2D31_15840 PF17836 PglD N-terminal domain L2D31_15840 PF00132 Bacterial transferase hexapeptide (six repeats) L2D31_15845 PF02397 Bacterial sugar transferase L2D31_15850 PF14667 Polysaccharide biosynthesis C-terminal domain L2D31_15850 PF01943 Polysaccharide biosynthesis protein L2D31_15855 PF04230 Polysaccharide pyruvyl transferase L2D31_15860 PF00535 Glycosyl transferase family 2 L2D31_15870 PF13439 Glycosyltransferase Family 4 L2D31_15870 PF00534 Glycosyl transferases group 1 L2D31_15875 PF00535 Glycosyl transferase family 2 L2D31_15880 PF13439 Glycosyltransferase Family 4 L2D31_15880 PF00534 Glycosyl transferases group 1 L2D31_15885 PF02719 Polysaccharide biosynthesis protein L2D31_15890 PF13614 AAA domain L2D31_15895 PF02706 Chain length determinant protein L2D31_15900 PF01381 Helix-turn-helix L2D31_15900 PF08671 Anti-repressor SinI L2D31_15910 PF01497 Periplasmic binding protein L2D31_15915 PF01032 FecCD transport family L2D31_15920 PF01032 FecCD transport family L2D31_15925 PF01522 Polysaccharide deacetylase L2D31_15925 PF13739 Deacetylase PdaC L2D31_15925 PF11738 Protein of unknown function (DUF3298) L2D31_15930 PF12848 ABC transporter L2D31_15930 PF00005 ABC transporter L2D31_15935 PF00005 ABC transporter L2D31_15940 PF00005 ABC transporter L2D31_15945 PF12911 N-terminal TM domain of oligopeptide transport permease C L2D31_15945 PF00528 Binding-protein-dependent transport system inner membrane component L2D31_15950 PF00528 Binding-protein-dependent transport system inner membrane component L2D31_15955 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle L2D31_15960 PF00201 UDP-glucoronosyl and UDP-glucosyl transferase L2D31_15965 PF01497 Periplasmic binding protein L2D31_15980 PF00574 Clp protease L2D31_15985 PF03641 Possible lysine decarboxylase L2D31_15990 PF03819 MazG nucleotide pyrophosphohydrolase domain L2D31_15995 PF01740 STAS domain L2D31_15995 PF00916 Sulfate permease family L2D31_16000 PF00484 Carbonic anhydrase L2D31_16005 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain L2D31_16005 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain L2D31_16010 PF00545 ribonuclease L2D31_16015 PF00375 Sodium:dicarboxylate symporter family L2D31_16020 PF00266 Aminotransferase class-V L2D31_16030 PF00797 N-acetyltransferase L2D31_16035 PF00381 PTS HPr component phosphorylation site L2D31_16040 PF14527 WhiA LAGLIDADG-like domain L2D31_16040 PF02650 WhiA C-terminal HTH domain L2D31_16040 PF10298 WhiA N-terminal LAGLIDADG-like domain L2D31_16045 PF01933 Uncharacterised protein family UPF0052 L2D31_16050 PF03668 P-loop ATPase protein family L2D31_16055 PF00293 NUDIX domain L2D31_16060 PF07992 Pyridine nucleotide-disulphide oxidoreductase L2D31_16065 PF00877 NlpC/P60 family L2D31_16075 PF01502 Phosphoribosyl-AMP cyclohydrolase L2D31_16075 PF01503 Phosphoribosyl-ATP pyrophosphohydrolase L2D31_16080 PF00977 Histidine biosynthesis protein L2D31_16085 PF00977 Histidine biosynthesis protein L2D31_16090 PF00117 Glutamine amidotransferase class-I L2D31_16095 PF00475 Imidazoleglycerol-phosphate dehydratase L2D31_16100 PF00815 Histidinol dehydrogenase L2D31_16105 PF01634 ATP phosphoribosyltransferase L2D31_16110 PF13393 Histidyl-tRNA synthetase L2D31_16115 PF13529 Peptidase_C39 like family L2D31_16125 PF13460 NAD(P)H-binding L2D31_16130 PF02082 Transcriptional regulator L2D31_16135 PF14602 Hexapeptide repeat of succinyl-transferase L2D31_16140 PF13419 Haloacid dehalogenase-like hydrolase L2D31_16145 PF07670 Nucleoside recognition L2D31_16150 PF01790 Prolipoprotein diacylglyceryl transferase L2D31_16155 PF07475 HPr Serine kinase C-terminal domain L2D31_16155 PF02603 HPr Serine kinase N terminus L2D31_16160 PF01979 Amidohydrolase family L2D31_16165 PF01182 Glucosamine-6-phosphate isomerases/6-phosphogluconolactonase L2D31_16170 PF07702 UTRA domain L2D31_16170 PF00392 Bacterial regulatory proteins, gntR family L2D31_16175 PF00149 Calcineurin-like phosphoesterase L2D31_16180 PF04020 Mycobacterial 4 TMS phage holin, superfamily IV L2D31_16185 PF04024 PspC domain L2D31_16190 PF13349 Putative adhesin L2D31_16205 PF17760 UvrA interaction domain L2D31_16205 PF00005 ABC transporter L2D31_16205 PF17755 UvrA DNA-binding domain L2D31_16210 PF02151 UvrB/uvrC motif L2D31_16210 PF04851 Type III restriction enzyme, res subunit L2D31_16210 PF17757 UvrB interaction domain L2D31_16210 PF00271 Helicase conserved C-terminal domain L2D31_16210 PF12344 Ultra-violet resistance protein B L2D31_16215 PF09964 Uncharacterized protein conserved in bacteria (DUF2198) L2D31_16220 PF00391 PEP-utilising enzyme, mobile domain L2D31_16220 PF01326 Pyruvate phosphate dikinase, PEP/pyruvate binding domain L2D31_16225 PF00440 Bacterial regulatory proteins, tetR family L2D31_16230 PF07690 Major Facilitator Superfamily L2D31_16240 PF00072 Response regulator receiver domain L2D31_16240 PF00486 Transcriptional regulatory protein, C terminal L2D31_16245 PF00989 PAS fold L2D31_16245 PF00512 His Kinase A (phospho-acceptor) domain L2D31_16245 PF18698 Histidine kinase sensor domain L2D31_16245 PF00672 HAMP domain L2D31_16245 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase L2D31_16250 PF13231 Dolichyl-phosphate-mannose-protein mannosyltransferase L2D31_16255 PF00535 Glycosyl transferase family 2 L2D31_16260 PF00324 Amino acid permease L2D31_16265 PF00881 Nitroreductase family L2D31_16270 PF01638 HxlR-like helix-turn-helix L2D31_16275 PF17820 PDZ domain L2D31_16280 PF17423 Swarming motility protein L2D31_16285 PF17820 PDZ domain L2D31_16285 PF03572 Peptidase family S41 L2D31_16285 PF01471 Putative peptidoglycan binding domain L2D31_16290 PF01925 Sulfite exporter TauE/SafE L2D31_16295 PF00877 NlpC/P60 family L2D31_16300 PF18075 FtsX extracellular domain L2D31_16300 PF02687 FtsX-like permease family L2D31_16305 PF00005 ABC transporter L2D31_16310 PF13442 Cytochrome C oxidase, cbb3-type, subunit III L2D31_16315 PF10035 Uncharacterized protein conserved in bacteria (DUF2179) L2D31_16315 PF02588 Uncharacterised 5xTM membrane BCR, YitT family COG1284 L2D31_16335 PF02810 SEC-C motif L2D31_16335 PF07517 SecA DEAD-like domain L2D31_16335 PF07516 SecA Wing and Scaffold domain L2D31_16335 PF01043 SecA preprotein cross-linking domain L2D31_16340 PF02482 Sigma 54 modulation protein / S30EA ribosomal protein L2D31_16340 PF16321 Sigma 54 modulation/S30EA ribosomal protein C terminus L2D31_16345 PF00672 HAMP domain L2D31_16345 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain L2D31_16345 PF02743 Cache domain L2D31_16360 PF02561 Flagellar protein FliS L2D31_16365 PF07196 Flagellin hook IN motif L2D31_16365 PF02465 Flagellar hook-associated protein 2 N-terminus L2D31_16365 PF07195 Flagellar hook-associated protein 2 C-terminus L2D31_16370 PF03646 FlaG protein L2D31_16375 PF02599 Global regulator protein family L2D31_16380 PF02623 FliW protein L2D31_16390 PF00700 Bacterial flagellin C-terminal helical region L2D31_16390 PF00669 Bacterial flagellin N-terminal helical region L2D31_16395 PF00460 Flagella basal body rod protein L2D31_16395 PF06429 Flagellar basal body rod FlgEFG protein C-terminal L2D31_16400 PF05130 FlgN protein L2D31_16420 PF10719 Late competence development protein ComFB L2D31_16425 PF00271 Helicase conserved C-terminal domain L2D31_16425 PF04851 Type III restriction enzyme, res subunit L2D31_16430 PF02645 Uncharacterised protein, DegV family COG1307 L2D31_16435 PF00196 Bacterial regulatory proteins, luxR family L2D31_16435 PF00072 Response regulator receiver domain L2D31_16440 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase L2D31_16440 PF07730 Histidine kinase L2D31_16440 PF05384 Sensor protein DegS L2D31_16445 PF09186 Domain of unknown function (DUF1949) L2D31_16445 PF01205 Uncharacterized protein family UPF0029 L2D31_16450 PF03816 Cell envelope-related transcriptional attenuator domain L2D31_16455 PF00953 Glycosyl transferase family 4 L2D31_16465 PF00535 Glycosyl transferase family 2 L2D31_16470 PF02706 Chain length determinant protein L2D31_16475 PF04932 O-Antigen ligase L2D31_16480 PF16363 GDP-mannose 4,6 dehydratase L2D31_16485 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain L2D31_16485 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain L2D31_16485 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain L2D31_16490 PF00534 Glycosyl transferases group 1 L2D31_16490 PF13439 Glycosyltransferase Family 4 L2D31_16495 PF01943 Polysaccharide biosynthesis protein L2D31_16495 PF14667 Polysaccharide biosynthesis C-terminal domain L2D31_16500 PF02397 Bacterial sugar transferase L2D31_16510 PF01520 N-acetylmuramoyl-L-alanine amidase L2D31_16510 PF04122 Putative cell wall binding repeat 2 L2D31_16515 PF01520 N-acetylmuramoyl-L-alanine amidase L2D31_16515 PF04122 Putative cell wall binding repeat 2 L2D31_16520 PF08486 Stage II sporulation protein L2D31_16520 PF04122 Putative cell wall binding repeat 2 L2D31_16530 PF03816 Cell envelope-related transcriptional attenuator domain L2D31_16535 PF02350 UDP-N-acetylglucosamine 2-epimerase L2D31_16540 PF00483 Nucleotidyl transferase L2D31_16545 PF00005 ABC transporter L2D31_16550 PF01061 ABC-2 type transporter L2D31_16555 PF00535 Glycosyl transferase family 2 L2D31_16560 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family L2D31_16565 PF07478 D-ala D-ala ligase C-terminus L2D31_16565 PF01820 D-ala D-ala ligase N-terminus L2D31_16570 PF04464 CDP-Glycerol:Poly(glycerophosphate) glycerophosphotransferase L2D31_16575 PF16363 GDP-mannose 4,6 dehydratase L2D31_16580 PF00483 Nucleotidyl transferase L2D31_16585 PF04464 CDP-Glycerol:Poly(glycerophosphate) glycerophosphotransferase L2D31_16595 PF01467 Cytidylyltransferase-like L2D31_16600 PF03808 Glycosyl transferase WecB/TagA/CpsF family L2D31_16605 PF04464 CDP-Glycerol:Poly(glycerophosphate) glycerophosphotransferase L2D31_16610 PF01832 Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase L2D31_16610 PF08239 Bacterial SH3 domain L2D31_16610 PF05036 Sporulation related domain L2D31_16615 PF04464 CDP-Glycerol:Poly(glycerophosphate) glycerophosphotransferase L2D31_16620 PF01238 Phosphomannose isomerase type I L2D31_16625 PF00528 Binding-protein-dependent transport system inner membrane component L2D31_16630 PF00528 Binding-protein-dependent transport system inner membrane component L2D31_16635 PF01547 Bacterial extracellular solute-binding protein L2D31_16640 PF00072 Response regulator receiver domain L2D31_16640 PF00196 Bacterial regulatory proteins, luxR family L2D31_16645 PF00672 HAMP domain L2D31_16645 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase L2D31_16645 PF06580 Histidine kinase L2D31_16645 PF02743 Cache domain L2D31_16655 PF00583 Acetyltransferase (GNAT) family L2D31_16660 PF01081 KDPG and KHG aldolase L2D31_16665 PF00294 pfkB family carbohydrate kinase L2D31_16670 PF00356 Bacterial regulatory proteins, lacI family L2D31_16675 PF04962 KduI/IolB family L2D31_16685 PF03323 Bacillus/Clostridium GerA spore germination protein L2D31_16690 PF03845 Spore germination protein L2D31_16695 PF05504 Spore germination B3/ GerAC like, C-terminal L2D31_16700 PF00534 Glycosyl transferases group 1 L2D31_16700 PF00535 Glycosyl transferase family 2 L2D31_16705 PF00083 Sugar (and other) transporter L2D31_16710 PF03816 Cell envelope-related transcriptional attenuator domain L2D31_16720 PF00877 NlpC/P60 family L2D31_16730 PF09587 Bacterial capsule synthesis protein PGA_cap L2D31_16735 PF14102 Capsule biosynthesis CapC L2D31_16740 PF08245 Mur ligase middle domain L2D31_16745 PF03323 Bacillus/Clostridium GerA spore germination protein L2D31_16755 PF05504 Spore germination B3/ GerAC like, C-terminal L2D31_16760 PF00356 Bacterial regulatory proteins, lacI family L2D31_16765 PF00294 pfkB family carbohydrate kinase L2D31_16770 PF05025 RbsD / FucU transport protein family L2D31_16775 PF00005 ABC transporter L2D31_16780 PF02653 Branched-chain amino acid transport system / permease component L2D31_16785 PF13407 Periplasmic binding protein domain L2D31_16790 PF01613 Flavin reductase like domain L2D31_16795 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family L2D31_16795 PF03466 LysR substrate binding domain L2D31_16800 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain L2D31_16800 PF00205 Thiamine pyrophosphate enzyme, central domain L2D31_16800 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain L2D31_16805 PF03306 Alpha-acetolactate decarboxylase L2D31_16810 PF01037 Lrp/AsnC ligand binding domain L2D31_16810 PF13404 AsnC-type helix-turn-helix domain L2D31_16815 PF02417 Chromate transporter L2D31_16820 PF02417 Chromate transporter L2D31_16825 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain L2D31_16825 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain L2D31_16825 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain L2D31_16835 PF04434 SWIM zinc finger L2D31_16840 PF12419 SNF2 Helicase protein L2D31_16840 PF00271 Helicase conserved C-terminal domain L2D31_16840 PF00176 SNF2 family N-terminal domain L2D31_16845 PF01740 STAS domain L2D31_16845 PF13426 PAS domain L2D31_16860 PF14183 YwpF-like protein L2D31_16865 PF01741 Large-conductance mechanosensitive channel, MscL L2D31_16870 PF07977 FabA-like domain L2D31_16875 PF18801 response regulator aspartate phosphatase H, N terminal L2D31_16880 PF06429 Flagellar basal body rod FlgEFG protein C-terminal L2D31_16880 PF00460 Flagella basal body rod protein L2D31_16885 PF00460 Flagella basal body rod protein L2D31_16885 PF06429 Flagellar basal body rod FlgEFG protein C-terminal L2D31_16895 PF12116 Stage III sporulation protein D L2D31_16900 PF01047 MarR family L2D31_16905 PF07690 Major Facilitator Superfamily L2D31_16910 PF01569 PAP2 superfamily L2D31_16915 PF07690 Major Facilitator Superfamily L2D31_16920 PF00497 Bacterial extracellular solute-binding proteins, family 3 L2D31_16925 PF00528 Binding-protein-dependent transport system inner membrane component L2D31_16930 PF00005 ABC transporter L2D31_16935 PF00909 Ammonium Transporter Family L2D31_16940 PF00543 Nitrogen regulatory protein P-II L2D31_16945 PF01551 Peptidase family M23 L2D31_16950 PF00583 Acetyltransferase (GNAT) family L2D31_16965 PF00005 ABC transporter L2D31_16985 PF00471 Ribosomal protein L33 L2D31_16990 PF02492 CobW/HypB/UreG, nucleotide-binding domain L2D31_16990 PF07683 Cobalamin synthesis protein cobW C-terminal domain L2D31_16995 PF00253 Ribosomal protein S14p/S29e L2D31_17000 PF06463 Molybdenum Cofactor Synthesis C L2D31_17000 PF04055 Radical SAM superfamily L2D31_17005 PF02634 FdhD/NarQ family L2D31_17010 PF07690 Major Facilitator Superfamily L2D31_17015 PF01568 Molydopterin dinucleotide binding domain L2D31_17015 PF18364 Molybdopterin oxidoreductase N-terminal domain L2D31_17015 PF00384 Molybdopterin oxidoreductase L2D31_17020 PF00092 von Willebrand factor type A domain L2D31_17025 PF00092 von Willebrand factor type A domain L2D31_17030 PF08486 Stage II sporulation protein L2D31_17035 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) L2D31_17040 PF08680 TATA-box binding L2D31_17045 PF06612 Protein of unknown function (DUF1146) L2D31_17055 PF00401 ATP synthase, Delta/Epsilon chain, long alpha-helix domain L2D31_17055 PF02823 ATP synthase, Delta/Epsilon chain, beta-sandwich domain L2D31_17060 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain L2D31_17060 PF02874 ATP synthase alpha/beta family, beta-barrel domain L2D31_17065 PF00231 ATP synthase L2D31_17070 PF00306 ATP synthase alpha/beta chain, C terminal domain L2D31_17070 PF02874 ATP synthase alpha/beta family, beta-barrel domain L2D31_17070 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain L2D31_17075 PF00213 ATP synthase delta (OSCP) subunit L2D31_17080 PF00430 ATP synthase B/B' CF(0) L2D31_17085 PF00137 ATP synthase subunit C L2D31_17090 PF00119 ATP synthase A chain L2D31_17095 PF03899 ATP synthase I chain L2D31_17105 PF00464 Serine hydroxymethyltransferase L2D31_17110 PF04260 Protein of unknown function (DUF436) L2D31_17115 PF02502 Ribose/Galactose Isomerase L2D31_17120 PF01451 Low molecular weight phosphotyrosine protein phosphatase L2D31_17125 PF02659 Putative manganese efflux pump L2D31_17130 PF03481 Putative GTP-binding controlling metal-binding L2D31_17130 PF01300 Telomere recombination L2D31_17140 PF09551 Stage II sporulation protein R (spore_II_R) L2D31_17150 PF17827 PrmC N-terminal domain L2D31_17150 PF05175 Methyltransferase small domain L2D31_17155 PF03462 PCRF domain L2D31_17155 PF00472 RF-1 domain L2D31_17160 PF13411 MerR HTH family regulatory protein L2D31_17165 PF03547 Membrane transport protein L2D31_17170 PF00390 Malic enzyme, N-terminal domain L2D31_17170 PF03949 Malic enzyme, NAD binding domain L2D31_17175 PF00265 Thymidine kinase L2D31_17180 PF01197 Ribosomal protein L31 L2D31_17185 PF07497 Rho termination factor, RNA-binding domain L2D31_17185 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain L2D31_17185 PF07498 Rho termination factor, N-terminal domain L2D31_17190 PF03320 Bacterial fructose-1,6-bisphosphatase, glpX-encoded L2D31_17195 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) L2D31_17200 PF00923 Transaldolase/Fructose-6-phosphate aldolase L2D31_17205 PF01116 Fructose-bisphosphate aldolase class-II L2D31_17210 PF00072 Response regulator receiver domain L2D31_17215 PF10740 Domain of unknown function (DUF2529) L2D31_17220 PF06418 CTP synthase N-terminus L2D31_17220 PF00117 Glutamine amidotransferase class-I L2D31_17225 PF05066 HB1, ASXL, restriction endonuclease HTH domain L2D31_17240 PF02771 Acyl-CoA dehydrogenase, N-terminal domain L2D31_17240 PF00441 Acyl-CoA dehydrogenase, C-terminal domain L2D31_17240 PF02770 Acyl-CoA dehydrogenase, middle domain L2D31_17245 PF02770 Acyl-CoA dehydrogenase, middle domain L2D31_17245 PF02771 Acyl-CoA dehydrogenase, N-terminal domain L2D31_17245 PF00441 Acyl-CoA dehydrogenase, C-terminal domain L2D31_17250 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain L2D31_17250 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain L2D31_17255 PF02803 Thiolase, C-terminal domain L2D31_17255 PF00108 Thiolase, N-terminal domain L2D31_17260 PF02754 Cysteine-rich domain L2D31_17260 PF13183 4Fe-4S dicluster domain L2D31_17265 PF13091 PLD-like domain L2D31_17270 PF03851 UV-endonuclease UvdE L2D31_17280 PF02016 LD-carboxypeptidase N-terminal domain L2D31_17280 PF17676 LD-carboxypeptidase C-terminal domain L2D31_17285 PF00664 ABC transporter transmembrane region L2D31_17285 PF00005 ABC transporter L2D31_17290 PF13091 PLD-like domain L2D31_17290 PF13396 Phospholipase_D-nuclease N-terminal L2D31_17295 PF02016 LD-carboxypeptidase N-terminal domain L2D31_17295 PF17676 LD-carboxypeptidase C-terminal domain L2D31_17305 PF03485 Arginyl tRNA synthetase N terminal domain L2D31_17305 PF05746 DALR anticodon binding domain L2D31_17305 PF00750 tRNA synthetases class I (R) L2D31_17310 PF09148 Domain of unknown function (DUF1934) L2D31_17320 PF00491 Arginase family L2D31_17325 PF17284 Spermidine synthase tetramerisation domain L2D31_17330 PF00912 Transglycosylase L2D31_17330 PF00905 Penicillin binding protein transpeptidase domain L2D31_17335 PF08741 YwhD family L2D31_17340 PF02163 Peptidase family M50 L2D31_17345 PF01361 Tautomerase enzyme L2D31_17355 PF00296 Luciferase-like monooxygenase L2D31_17360 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family L2D31_17360 PF03466 LysR substrate binding domain L2D31_17365 PF03358 NADPH-dependent FMN reductase L2D31_17370 PF00296 Luciferase-like monooxygenase L2D31_17375 PF00462 Glutaredoxin L2D31_17380 PF00583 Acetyltransferase (GNAT) family L2D31_17385 PF00528 Binding-protein-dependent transport system inner membrane component L2D31_17395 PF00528 Binding-protein-dependent transport system inner membrane component L2D31_17400 PF00005 ABC transporter L2D31_17410 PF01966 HD domain L2D31_17415 PF07293 Protein of unknown function (DUF1450) L2D31_17430 PF00535 Glycosyl transferase family 2 L2D31_17430 PF07238 PilZ domain L2D31_17440 PF03099 Biotin/lipoate A/B protein ligase family L2D31_17495 PF03737 Aldolase/RraA L2D31_17505 PF01515 Phosphate acetyl/butaryl transferase L2D31_17510 PF06778 Chlorite dismutase L2D31_17515 PF07690 Major Facilitator Superfamily L2D31_17520 PF01037 Lrp/AsnC ligand binding domain L2D31_17525 PF07690 Major Facilitator Superfamily L2D31_17535 PF07883 Cupin domain L2D31_17550 PF00155 Aminotransferase class I and II L2D31_17560 PF00908 dTDP-4-dehydrorhamnose 3,5-epimerase L2D31_17565 PF04321 RmlD substrate binding domain L2D31_17570 PF16363 GDP-mannose 4,6 dehydratase L2D31_17575 PF00483 Nucleotidyl transferase L2D31_17580 PF04101 Glycosyltransferase family 28 C-terminal domain L2D31_17585 PF02348 Cytidylyltransferase L2D31_17590 PF08666 SAF domain L2D31_17590 PF03102 NeuB family L2D31_17595 PF00583 Acetyltransferase (GNAT) family L2D31_17600 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family L2D31_17605 PF04464 CDP-Glycerol:Poly(glycerophosphate) glycerophosphotransferase L2D31_17610 PF00535 Glycosyl transferase family 2 L2D31_17620 PF09671 Spore coat protein (Spore_GerQ) L2D31_17630 PF04241 Protein of unknown function (DUF423) L2D31_17635 PF00860 Permease family L2D31_17640 PF17261 Family of unknown function (DUF5327) L2D31_17645 PF00171 Aldehyde dehydrogenase family L2D31_17650 PF03167 Uracil DNA glycosylase superfamily L2D31_17655 PF00535 Glycosyl transferase family 2 L2D31_17665 PF08543 Phosphomethylpyrimidine kinase L2D31_17695 PF08244 Glycosyl hydrolases family 32 C terminal L2D31_17695 PF00251 Glycosyl hydrolases family 32 N-terminal domain L2D31_17700 PF00367 phosphotransferase system, EIIB L2D31_17700 PF02378 Phosphotransferase system, EIIC L2D31_17705 PF03123 CAT RNA binding domain L2D31_17705 PF00874 PRD domain L2D31_17715 PF13860 FlgD Ig-like domain L2D31_17715 PF05922 Peptidase inhibitor I9 L2D31_17715 PF02225 PA domain L2D31_17715 PF00082 Subtilase family L2D31_17725 PF00296 Luciferase-like monooxygenase L2D31_17730 PF00881 Nitroreductase family L2D31_17735 PF01098 Cell cycle protein L2D31_17740 PF17368 Spore morphogenesis and germination YwcE L2D31_17745 PF03626 Prokaryotic Cytochrome C oxidase subunit IV L2D31_17750 PF00510 Cytochrome c oxidase subunit III L2D31_17755 PF00115 Cytochrome C and Quinol oxidase polypeptide I L2D31_17760 PF00116 Cytochrome C oxidase subunit II, periplasmic domain L2D31_17760 PF02790 Cytochrome C oxidase subunit II, transmembrane domain L2D31_17770 PF02744 Galactose-1-phosphate uridyl transferase, C-terminal domain L2D31_17770 PF01087 Galactose-1-phosphate uridyl transferase, N-terminal domain L2D31_17775 PF16363 GDP-mannose 4,6 dehydratase L2D31_17780 PF10509 Galactokinase galactose-binding signature L2D31_17780 PF08544 GHMP kinases C terminal L2D31_17780 PF00288 GHMP kinases N terminal domain L2D31_17795 PF04138 GtrA-like protein L2D31_17815 PF04341 Protein of unknown function, DUF485 L2D31_17820 PF00474 Sodium:solute symporter family L2D31_17835 PF02581 Thiamine monophosphate synthase L2D31_17840 PF02110 Hydroxyethylthiazole kinase family L2D31_17845 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family L2D31_17845 PF03466 LysR substrate binding domain L2D31_17850 PF03788 LrgA family L2D31_17855 PF04172 LrgB-like family L2D31_17860 PF10672 S-adenosylmethionine-dependent methyltransferase L2D31_17860 PF17785 PUA-like domain L2D31_17865 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily L2D31_17870 PF00005 ABC transporter L2D31_17875 PF00528 Binding-protein-dependent transport system inner membrane component L2D31_17880 PF00497 Bacterial extracellular solute-binding proteins, family 3 L2D31_17885 PF18801 response regulator aspartate phosphatase H, N terminal L2D31_17895 PF04607 Region found in RelA / SpoT proteins L2D31_17900 PF02653 Branched-chain amino acid transport system / permease component L2D31_17905 PF00005 ABC transporter L2D31_17910 PF13407 Periplasmic binding protein domain L2D31_17915 PF13229 Right handed beta helix region L2D31_17920 PF01063 Amino-transferase class IV L2D31_17930 PF11975 Family 4 glycosyl hydrolase C-terminal domain L2D31_17930 PF02056 Family 4 glycosyl hydrolase L2D31_17935 PF02255 PTS system, Lactose/Cellobiose specific IIA subunit L2D31_17940 PF02378 Phosphotransferase system, EIIC L2D31_17945 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit L2D31_17950 PF05043 Mga helix-turn-helix domain L2D31_17950 PF00874 PRD domain L2D31_17950 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 L2D31_17950 PF08279 HTH domain L2D31_17970 PF00208 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase L2D31_17970 PF02812 Glu/Leu/Phe/Val dehydrogenase, dimerisation domain L2D31_17985 PF04542 Sigma-70 region 2 L2D31_17985 PF08281 Sigma-70, region 4 L2D31_17990 PF00544 Pectate lyase L2D31_17995 PF00664 ABC transporter transmembrane region L2D31_17995 PF00005 ABC transporter L2D31_18000 PF00664 ABC transporter transmembrane region L2D31_18000 PF00005 ABC transporter L2D31_18005 PF02322 Cytochrome bd terminal oxidase subunit II L2D31_18010 PF01654 Cytochrome bd terminal oxidase subunit I L2D31_18015 PF03992 Antibiotic biosynthesis monooxygenase L2D31_18025 PF01032 FecCD transport family L2D31_18030 PF01497 Periplasmic binding protein L2D31_18035 PF04203 Sortase domain L2D31_18040 PF00005 ABC transporter L2D31_18045 PF01032 FecCD transport family L2D31_18050 PF01497 Periplasmic binding protein L2D31_18060 PF05031 Iron Transport-associated domain L2D31_18065 PF05031 Iron Transport-associated domain L2D31_18070 PF01638 HxlR-like helix-turn-helix L2D31_18075 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily L2D31_18080 PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase L2D31_18080 PF00925 GTP cyclohydrolase II L2D31_18085 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region L2D31_18085 PF01872 RibD C-terminal domain L2D31_18090 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily L2D31_18095 PF01522 Polysaccharide deacetylase L2D31_18100 PF02255 PTS system, Lactose/Cellobiose specific IIA subunit L2D31_18105 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit L2D31_18110 PF00232 Glycosyl hydrolase family 1 L2D31_18115 PF03786 D-mannonate dehydratase (UxuA) L2D31_18120 PF02378 Phosphotransferase system, EIIC L2D31_18125 PF08279 HTH domain L2D31_18125 PF00874 PRD domain L2D31_18125 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 L2D31_18125 PF05043 Mga helix-turn-helix domain L2D31_18150 PF03553 Na+/H+ antiporter family L2D31_18155 PF00206 Lyase L2D31_18155 PF10415 Fumarase C C-terminus L2D31_18160 PF00710 Asparaginase, N-terminal L2D31_18160 PF17763 Glutaminase/Asparaginase C-terminal domain L2D31_18165 PF01381 Helix-turn-helix L2D31_18175 PF17353 Family of unknown function (DUF5381) L2D31_18190 PF06013 Proteins of 100 residues with WXG L2D31_18195 PF07687 Peptidase dimerisation domain L2D31_18195 PF01546 Peptidase family M20/M25/M40 L2D31_18210 PF01418 Helix-turn-helix domain, rpiR family L2D31_18210 PF01380 SIS domain L2D31_18215 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase L2D31_18215 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase L2D31_18225 PF02447 GntP family permease L2D31_18230 PF01717 Cobalamin-independent synthase, Catalytic domain L2D31_18235 PF00232 Glycosyl hydrolase family 1 L2D31_18240 PF02378 Phosphotransferase system, EIIC L2D31_18240 PF00367 phosphotransferase system, EIIB L2D31_18240 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 L2D31_18245 PF03123 CAT RNA binding domain L2D31_18245 PF00874 PRD domain L2D31_18250 PF09234 Domain of unknown function (DUF1963) L2D31_18260 PF02361 Cobalt transport protein L2D31_18265 PF00005 ABC transporter L2D31_18270 PF09819 ABC-type cobalt transport system, permease component L2D31_18275 PF03070 TENA/THI-4/PQQC family L2D31_18305 PF05547 Immune inhibitor A peptidase M6 L2D31_18305 PF00801 PKD domain L2D31_18310 PF03992 Antibiotic biosynthesis monooxygenase L2D31_18315 PF00881 Nitroreductase family L2D31_18320 PF01047 MarR family L2D31_18325 PF00591 Glycosyl transferase family, a/b domain L2D31_18325 PF02885 Glycosyl transferase family, helical bundle domain L2D31_18325 PF07831 Pyrimidine nucleoside phosphorylase C-terminal domain L2D31_18330 PF01773 Na+ dependent nucleoside transporter N-terminus L2D31_18330 PF07662 Na+ dependent nucleoside transporter C-terminus L2D31_18335 PF01791 DeoC/LacD family aldolase L2D31_18340 PF04198 Putative sugar-binding domain L2D31_18350 PF01757 Acyltransferase family L2D31_18355 PF07690 Major Facilitator Superfamily L2D31_18365 PF13649 Methyltransferase domain L2D31_18370 PF00072 Response regulator receiver domain L2D31_18370 PF00196 Bacterial regulatory proteins, luxR family L2D31_18380 PF13411 MerR HTH family regulatory protein L2D31_18385 PF01408 Oxidoreductase family, NAD-binding Rossmann fold L2D31_18390 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain L2D31_18395 PF00324 Amino acid permease L2D31_18400 PF08713 DNA alkylation repair enzyme L2D31_18405 PF02447 GntP family permease L2D31_18410 PF00370 FGGY family of carbohydrate kinases, N-terminal domain L2D31_18410 PF02782 FGGY family of carbohydrate kinases, C-terminal domain L2D31_18415 PF01418 Helix-turn-helix domain, rpiR family L2D31_18415 PF01380 SIS domain L2D31_18420 PF01156 Inosine-uridine preferring nucleoside hydrolase L2D31_18455 PF03466 LysR substrate binding domain L2D31_18455 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family L2D31_18460 PF00356 Bacterial regulatory proteins, lacI family L2D31_18465 PF13416 Bacterial extracellular solute-binding protein L2D31_18470 PF00528 Binding-protein-dependent transport system inner membrane component L2D31_18475 PF00528 Binding-protein-dependent transport system inner membrane component L2D31_18480 PF07745 Glycosyl hydrolase family 53 L2D31_18485 PF02449 Beta-galactosidase L2D31_18485 PF08533 Beta-galactosidase C-terminal domain L2D31_18485 PF08532 Beta-galactosidase trimerisation domain L2D31_18505 PF00005 ABC transporter L2D31_18520 PF03600 Citrate transporter L2D31_18530 PF12679 ABC-2 family transporter protein L2D31_18535 PF00005 ABC transporter L2D31_18545 PF03831 PhnA domain L2D31_18545 PF08274 PhnA Zinc-Ribbon L2D31_18550 PF02595 Glycerate kinase family L2D31_18555 PF02447 GntP family permease L2D31_18560 PF17853 GGDEF-like domain L2D31_18560 PF13556 PucR C-terminal helix-turn-helix domain L2D31_18560 PF05651 Putative sugar diacid recognition L2D31_18565 PF00440 Bacterial regulatory proteins, tetR family L2D31_18565 PF17922 Tetracyclin repressor-like, C-terminal domain L2D31_18570 PF07690 Major Facilitator Superfamily L2D31_18580 PF00005 ABC transporter L2D31_18585 PF18801 response regulator aspartate phosphatase H, N terminal L2D31_18590 PF03123 CAT RNA binding domain L2D31_18590 PF00874 PRD domain L2D31_18595 PF00232 Glycosyl hydrolase family 1 L2D31_18600 PF02378 Phosphotransferase system, EIIC L2D31_18600 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 L2D31_18600 PF00367 phosphotransferase system, EIIB L2D31_18625 PF00293 NUDIX domain L2D31_18640 PF00324 Amino acid permease L2D31_18645 PF00356 Bacterial regulatory proteins, lacI family L2D31_18650 PF07690 Major Facilitator Superfamily L2D31_18655 PF08501 Shikimate dehydrogenase substrate binding domain L2D31_18655 PF18317 Shikimate 5'-dehydrogenase C-terminal domain L2D31_18660 PF07690 Major Facilitator Superfamily L2D31_18675 PF14410 HNH/ENDO VII superfamily nuclease with conserved GHE residues L2D31_18675 PF04740 LXG domain of WXG superfamily L2D31_18675 PF14449 Pre-toxin TG L2D31_18695 PF00232 Glycosyl hydrolase family 1 L2D31_18700 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 L2D31_18700 PF00367 phosphotransferase system, EIIB L2D31_18700 PF02378 Phosphotransferase system, EIIC L2D31_18705 PF00392 Bacterial regulatory proteins, gntR family L2D31_18705 PF07702 UTRA domain L2D31_18720 PF02567 Phenazine biosynthesis-like protein L2D31_18725 PF03466 LysR substrate binding domain L2D31_18725 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family L2D31_18745 PF13545 Crp-like helix-turn-helix domain L2D31_18745 PF00027 Cyclic nucleotide-binding domain L2D31_18750 PF00672 HAMP domain L2D31_18750 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase L2D31_18750 PF00512 His Kinase A (phospho-acceptor) domain L2D31_18755 PF00072 Response regulator receiver domain L2D31_18755 PF00486 Transcriptional regulatory protein, C terminal L2D31_18760 PF12823 Domain of unknown function (DUF3817) L2D31_18760 PF03176 MMPL family L2D31_18780 PF02590 Predicted SPOUT methyltransferase L2D31_18785 PF14116 YyzF-like protein L2D31_18790 PF02361 Cobalt transport protein L2D31_18795 PF00005 ABC transporter L2D31_18795 PF12558 ATP-binding cassette cobalt transporter L2D31_18800 PF07155 ECF-type riboflavin transporter, S component L2D31_18815 PF00005 ABC transporter L2D31_18820 PF00583 Acetyltransferase (GNAT) family L2D31_18825 PF13180 PDZ domain L2D31_18830 PF00753 Metallo-beta-lactamase superfamily L2D31_18835 PF09648 YycH protein L2D31_18840 PF07435 YycH protein L2D31_18845 PF00512 His Kinase A (phospho-acceptor) domain L2D31_18845 PF13426 PAS domain L2D31_18845 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase L2D31_18845 PF00672 HAMP domain L2D31_18850 PF00486 Transcriptional regulatory protein, C terminal L2D31_18850 PF00072 Response regulator receiver domain L2D31_18875 PF00578 AhpC/TSA family L2D31_18885 PF04235 Protein of unknown function (DUF418) L2D31_18890 PF00709 Adenylosuccinate synthetase L2D31_18895 PF00440 Bacterial regulatory proteins, tetR family L2D31_18900 PF00067 Cytochrome P450 L2D31_18905 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily L2D31_18910 PF00772 DnaB-like helicase N terminal domain L2D31_18910 PF03796 DnaB-like helicase C terminal domain L2D31_18915 PF16226 Domain of unknown function (DUF4885) L2D31_18925 PF00756 Putative esterase L2D31_18930 PF00106 short chain dehydrogenase L2D31_18935 PF00425 chorismate binding enzyme L2D31_18940 PF00501 AMP-binding enzyme L2D31_18940 PF13193 AMP-binding enzyme C-terminal domain L2D31_18945 PF00550 Phosphopantetheine attachment site L2D31_18945 PF00857 Isochorismatase family L2D31_18950 PF13193 AMP-binding enzyme C-terminal domain L2D31_18950 PF00501 AMP-binding enzyme L2D31_18950 PF00550 Phosphopantetheine attachment site L2D31_18950 PF00668 Condensation domain L2D31_18950 PF00975 Thioesterase domain L2D31_18955 PF03621 MbtH-like protein L2D31_18960 PF12833 Helix-turn-helix domain L2D31_18960 PF01497 Periplasmic binding protein L2D31_18965 PF01497 Periplasmic binding protein L2D31_18970 PF00756 Putative esterase L2D31_18975 PF14174 YycC-like protein L2D31_18980 PF07690 Major Facilitator Superfamily L2D31_18985 PF03948 Ribosomal protein L9, C-terminal domain L2D31_18985 PF01281 Ribosomal protein L9, N-terminal domain L2D31_18990 PF01368 DHH family L2D31_18990 PF02272 DHHA1 domain L2D31_18995 PF09991 Predicted membrane protein (DUF2232) L2D31_19000 PF01368 DHH family L2D31_19000 PF02833 DHHA2 domain L2D31_19005 PF11738 Protein of unknown function (DUF3298) L2D31_19005 PF13739 Deacetylase PdaC L2D31_19010 PF04542 Sigma-70 region 2 L2D31_19010 PF08281 Sigma-70, region 4 L2D31_19020 PF06628 Catalase-related immune-responsive L2D31_19020 PF00199 Catalase L2D31_19025 PF03358 NADPH-dependent FMN reductase L2D31_19030 PF01738 Dienelactone hydrolase family L2D31_19035 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily L2D31_19040 PF00528 Binding-protein-dependent transport system inner membrane component L2D31_19045 PF00005 ABC transporter L2D31_19045 PF00571 CBS domain L2D31_19050 PF01084 Ribosomal protein S18 L2D31_19055 PF00436 Single-strand binding protein family L2D31_19060 PF01250 Ribosomal protein S6 L2D31_19065 PF01926 50S ribosome-binding GTPase L2D31_19065 PF06071 Protein of unknown function (DUF933) L2D31_19070 PF06107 Bacterial protein of unknown function (DUF951) L2D31_19090 PF06866 Protein of unknown function (DUF1256) L2D31_19095 PF17762 HTH domain found in ParB protein L2D31_19095 PF02195 ParB-like nuclease domain L2D31_19100 PF13614 AAA domain L2D31_19110 PF02195 ParB-like nuclease domain L2D31_19110 PF17762 HTH domain found in ParB protein L2D31_19115 PF02527 rRNA small subunit methyltransferase G L2D31_19120 PF01134 Glucose inhibited division protein A L2D31_19120 PF13932 GidA associated domain L2D31_19125 PF01926 50S ribosome-binding GTPase L2D31_19125 PF12631 MnmE helical domain L2D31_19125 PF10396 GTP-binding protein TrmE N-terminus L2D31_19130 PF14804 Jag N-terminus L2D31_19130 PF01424 R3H domain L2D31_19135 PF02096 60Kd inner membrane protein L2D31_19140 PF00825 Ribonuclease P L2D31_19145 PF00468 Ribosomal protein L34