locus-tag class description J9319_00005 PF00308 Bacterial dnaA protein J9319_00005 PF08299 Bacterial dnaA protein helix-turn-helix J9319_00005 PF11638 DnaA N-terminal domain J9319_00010 PF00712 DNA polymerase III beta subunit, N-terminal domain J9319_00010 PF02767 DNA polymerase III beta subunit, central domain J9319_00010 PF02768 DNA polymerase III beta subunit, C-terminal domain J9319_00020 PF02463 RecF/RecN/SMC N terminal domain J9319_00025 PF04025 Domain of unknown function (DUF370) J9319_00030 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase J9319_00030 PF01751 Toprim domain J9319_00030 PF00204 DNA gyrase B J9319_00030 PF00986 DNA gyrase B subunit, carboxyl terminus J9319_00035 PF03989 DNA gyrase C-terminal domain, beta-propeller J9319_00035 PF00521 DNA gyrase/topoisomerase IV, subunit A J9319_00065 PF14175 YaaC-like Protein J9319_00070 PF00571 CBS domain J9319_00070 PF00478 IMP dehydrogenase / GMP reductase domain J9319_00075 PF07943 Penicillin-binding protein 5, C-terminal domain J9319_00075 PF00768 D-alanyl-D-alanine carboxypeptidase J9319_00080 PF00155 Aminotransferase class I and II J9319_00080 PF00392 Bacterial regulatory proteins, gntR family J9319_00085 PF01680 SOR/SNZ family J9319_00090 PF01174 SNO glutamine amidotransferase family J9319_00095 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) J9319_00095 PF02403 Seryl-tRNA synthetase N-terminal domain J9319_00100 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain J9319_00110 PF01712 Deoxynucleoside kinase J9319_00115 PF01712 Deoxynucleoside kinase J9319_00120 PF00704 Glycosyl hydrolases family 18 J9319_00120 PF01476 LysM domain J9319_00125 PF00857 Isochorismatase family J9319_00130 PF14437 MafB19-like deaminase J9319_00140 PF12169 DNA polymerase III subunits gamma and tau domain III J9319_00145 PF02575 YbaB/EbfC DNA-binding family J9319_00150 PF13662 Toprim domain J9319_00150 PF02132 RecR protein J9319_00155 PF10704 Protein of unknown function (DUF2508) J9319_00160 PF07441 SigmaK-factor processing regulatory protein BofA J9319_00190 PF10764 Inhibitor of sigma-G Gin J9319_00195 PF10112 5-bromo-4-chloroindolyl phosphate hydrolysis protein J9319_00200 PF05816 Toxic anion resistance protein (TelA) J9319_00205 PF01276 Orn/Lys/Arg decarboxylase, major domain J9319_00205 PF03711 Orn/Lys/Arg decarboxylase, C-terminal domain J9319_00210 PF02223 Thymidylate kinase J9319_00215 PF06153 Cyclic-di-AMP receptor J9319_00220 PF03885 Protein of unknown function (DUF327) J9319_00225 PF09115 DNA polymerase III, delta subunit, C terminal J9319_00230 PF04468 PSP1 C-terminal conserved region J9319_00235 PF06156 Initiation control protein YabA J9319_00240 PF05175 Methyltransferase small domain J9319_00245 PF01541 GIY-YIG catalytic domain J9319_00250 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases J9319_00255 PF18277 AbrB C-terminal domain J9319_00255 PF04014 Antidote-toxin recognition MazE, bacterial antitoxin J9319_00260 PF08264 Anticodon-binding domain of tRNA J9319_00260 PF09334 tRNA synthetases class I (M) J9319_00260 PF01588 Putative tRNA binding domain J9319_00265 PF01026 TatD related DNase J9319_00270 PF07501 G5 domain J9319_00270 PF03990 G5-linked-Ubiquitin-like domain J9319_00270 PF06725 3D domain J9319_00275 PF13331 Domain of unknown function (DUF4093) J9319_00275 PF13662 Toprim domain J9319_00280 PF00398 Ribosomal RNA adenine dimethylase J9319_00285 PF05582 YabG peptidase U57 J9319_00290 PF06257 Biofilm formation stimulator VEG J9319_00295 PF00269 Small, acid-soluble spore proteins, alpha/beta type J9319_00300 PF00288 GHMP kinases N terminal domain J9319_00300 PF08544 GHMP kinases C terminal J9319_00305 PF00156 Phosphoribosyl transferase domain J9319_00305 PF09182 Bacterial purine repressor, N-terminal J9319_00310 PF01042 Endoribonuclease L-PSP J9319_00315 PF04026 SpoVG J9319_00320 PF00132 Bacterial transferase hexapeptide (six repeats) J9319_00320 PF00483 Nucleotidyl transferase J9319_00325 PF14572 Phosphoribosyl synthetase-associated domain J9319_00325 PF13793 N-terminal domain of ribose phosphate pyrophosphokinase J9319_00330 PF01386 Ribosomal L25p family J9319_00330 PF14693 Ribosomal protein TL5, C-terminal domain J9319_00335 PF01195 Peptidyl-tRNA hydrolase J9319_00340 PF10955 Protein of unknown function (DUF2757) J9319_00345 PF17757 UvrB interaction domain J9319_00345 PF03461 TRCF domain J9319_00345 PF00271 Helicase conserved C-terminal domain J9319_00345 PF02559 CarD-like/TRCF domain J9319_00345 PF00270 DEAD/DEAH box helicase J9319_00350 PF04014 Antidote-toxin recognition MazE, bacterial antitoxin J9319_00350 PF15714 Stage V sporulation protein T C-terminal, transcription factor J9319_00355 PF14667 Polysaccharide biosynthesis C-terminal domain J9319_00355 PF01943 Polysaccharide biosynthesis protein J9319_00360 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases J9319_00360 PF03819 MazG nucleotide pyrophosphohydrolase domain J9319_00365 PF01479 S4 domain J9319_00370 PF07873 YabP family J9319_00375 PF09578 Spore cortex protein YabQ (Spore_YabQ) J9319_00380 PF04977 Septum formation initiator J9319_00385 PF00575 S1 RNA binding domain J9319_00400 PF07228 Stage II sporulation protein E (SpoIIE) J9319_00405 PF00092 von Willebrand factor type A domain J9319_00410 PF00069 Protein kinase domain J9319_00415 PF01171 PP-loop family J9319_00415 PF09179 TilS substrate binding domain J9319_00415 PF11734 TilS substrate C-terminal domain J9319_00420 PF00156 Phosphoribosyl transferase domain J9319_00425 PF01434 Peptidase family M41 J9319_00425 PF06480 FtsH Extracellular J9319_00425 PF17862 AAA+ lid domain J9319_00425 PF00004 ATPase family associated with various cellular activities (AAA) J9319_00430 PF03309 Type III pantothenate kinase J9319_00435 PF01430 Hsp33 protein J9319_00440 PF13145 PPIC-type PPIASE domain J9319_00445 PF00291 Pyridoxal-phosphate dependent enzyme J9319_00450 PF04715 Anthranilate synthase component I, N terminal region J9319_00450 PF00425 chorismate binding enzyme J9319_00455 PF00117 Glutamine amidotransferase class-I J9319_00460 PF01063 Amino-transferase class IV J9319_00465 PF00809 Pterin binding enzyme J9319_00470 PF02152 Dihydroneopterin aldolase J9319_00475 PF01288 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK) J9319_00480 PF01381 Helix-turn-helix J9319_00485 PF01207 Dihydrouridine synthase (Dus) J9319_00490 PF00152 tRNA synthetases class II (D, K and N) J9319_00490 PF01336 OB-fold nucleic acid binding domain J9319_00570 PF05848 CtsR N-terminal HTH domain J9319_00570 PF17727 CtsR C-terminal dimerization domain J9319_00575 PF02151 UvrB/uvrC motif J9319_00580 PF00217 ATP:guanido phosphotransferase, C-terminal catalytic domain J9319_00585 PF10431 C-terminal, D2-small domain, of ClpB protein J9319_00585 PF02861 Clp amino terminal domain, pathogenicity island component J9319_00585 PF17871 AAA lid domain J9319_00585 PF07724 AAA domain (Cdc48 subfamily) J9319_00585 PF00004 ATPase family associated with various cellular activities (AAA) J9319_00590 PF18073 Rubredoxin metal binding domain J9319_00595 PF10635 DisA bacterial checkpoint controller linker region J9319_00595 PF02457 DisA bacterial checkpoint controller nucleotide-binding J9319_00605 PF01128 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase J9319_00610 PF02542 YgbB family J9319_00615 PF00749 tRNA synthetases class I (E and Q), catalytic domain J9319_00620 PF06426 Serine acetyltransferase, N-terminal J9319_00620 PF00132 Bacterial transferase hexapeptide (six repeats) J9319_00625 PF01406 tRNA synthetases class I (C) catalytic domain J9319_00625 PF09190 DALR domain J9319_00630 PF00636 Ribonuclease III domain J9319_00635 PF08032 RNA 2'-O ribose methyltransferase substrate binding J9319_00635 PF00588 SpoU rRNA Methylase family J9319_00640 PF05991 YacP-like NYN domain J9319_00645 PF04542 Sigma-70 region 2 J9319_00645 PF08281 Sigma-70, region 4 J9319_00650 PF00471 Ribosomal protein L33 J9319_00655 PF00584 SecE/Sec61-gamma subunits of protein translocation complex J9319_00660 PF00467 KOW motif J9319_00660 PF02357 Transcription termination factor nusG J9319_00665 PF03946 Ribosomal protein L11, N-terminal domain J9319_00665 PF00298 Ribosomal protein L11, RNA binding domain J9319_00670 PF00687 Ribosomal protein L1p/L10e family J9319_00675 PF00466 Ribosomal protein L10 J9319_00680 PF00542 Ribosomal protein L7/L12 C-terminal domain J9319_00680 PF16320 Ribosomal protein L7/L12 dimerisation domain J9319_00685 PF05175 Methyltransferase small domain J9319_00690 PF04565 RNA polymerase Rpb2, domain 3 J9319_00690 PF04560 RNA polymerase Rpb2, domain 7 J9319_00690 PF04563 RNA polymerase beta subunit J9319_00690 PF04561 RNA polymerase Rpb2, domain 2 J9319_00690 PF00562 RNA polymerase Rpb2, domain 6 J9319_00690 PF10385 RNA polymerase beta subunit external 1 domain J9319_00695 PF04983 RNA polymerase Rpb1, domain 3 J9319_00695 PF04998 RNA polymerase Rpb1, domain 5 J9319_00695 PF05000 RNA polymerase Rpb1, domain 4 J9319_00695 PF04997 RNA polymerase Rpb1, domain 1 J9319_00695 PF00623 RNA polymerase Rpb1, domain 2 J9319_00700 PF01248 Ribosomal protein L7Ae/L30e/S12e/Gadd45 family J9319_00705 PF00164 Ribosomal protein S12/S23 J9319_00710 PF00177 Ribosomal protein S7p/S5e J9319_00715 PF03144 Elongation factor Tu domain 2 J9319_00715 PF00009 Elongation factor Tu GTP binding domain J9319_00715 PF14492 Elongation Factor G, domain II J9319_00715 PF03764 Elongation factor G, domain IV J9319_00715 PF00679 Elongation factor G C-terminus J9319_00720 PF00009 Elongation factor Tu GTP binding domain J9319_00720 PF03144 Elongation factor Tu domain 2 J9319_00720 PF03143 Elongation factor Tu C-terminal domain J9319_00725 PF12146 Serine aminopeptidase, S33 J9319_00730 PF00338 Ribosomal protein S10p/S20e J9319_00735 PF00297 Ribosomal protein L3 J9319_00740 PF00573 Ribosomal protein L4/L1 family J9319_00745 PF00276 Ribosomal protein L23 J9319_00750 PF03947 Ribosomal Proteins L2, C-terminal domain J9319_00750 PF00181 Ribosomal Proteins L2, RNA binding domain J9319_00755 PF00203 Ribosomal protein S19 J9319_00760 PF00237 Ribosomal protein L22p/L17e J9319_00765 PF07650 KH domain J9319_00765 PF00189 Ribosomal protein S3, C-terminal domain J9319_00770 PF00252 Ribosomal protein L16p/L10e J9319_00775 PF00831 Ribosomal L29 protein J9319_00780 PF00366 Ribosomal protein S17 J9319_00785 PF00238 Ribosomal protein L14p/L23e J9319_00790 PF00467 KOW motif J9319_00790 PF17136 Ribosomal proteins 50S L24/mitochondrial 39S L24 J9319_00795 PF00281 Ribosomal protein L5 J9319_00795 PF00673 ribosomal L5P family C-terminus J9319_00800 PF00253 Ribosomal protein S14p/S29e J9319_00805 PF00410 Ribosomal protein S8 J9319_00810 PF00347 Ribosomal protein L6 J9319_00815 PF00861 Ribosomal L18 of archaea, bacteria, mitoch. and chloroplast J9319_00820 PF03719 Ribosomal protein S5, C-terminal domain J9319_00820 PF00333 Ribosomal protein S5, N-terminal domain J9319_00825 PF00327 Ribosomal protein L30p/L7e J9319_00830 PF00828 Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27A J9319_00835 PF00344 SecY translocase J9319_00840 PF05191 Adenylate kinase, active site lid J9319_00845 PF00557 Metallopeptidase family M24 J9319_00850 PF01176 Translation initiation factor 1A / IF-1 J9319_00855 PF00444 Ribosomal protein L36 J9319_00860 PF00416 Ribosomal protein S13/S18 J9319_00865 PF00411 Ribosomal protein S11 J9319_00870 PF03118 Bacterial RNA polymerase, alpha chain C terminal domain J9319_00870 PF01000 RNA polymerase Rpb3/RpoA insert domain J9319_00870 PF01193 RNA polymerase Rpb3/Rpb11 dimerisation domain J9319_00875 PF01196 Ribosomal protein L17 J9319_00880 PF00005 ABC transporter J9319_00885 PF00005 ABC transporter J9319_00890 PF02361 Cobalt transport protein J9319_00895 PF01416 tRNA pseudouridine synthase J9319_00900 PF00572 Ribosomal protein L13 J9319_00905 PF00380 Ribosomal protein S9/S16 J9319_00910 PF13302 Acetyltransferase (GNAT) domain J9319_00935 PF10730 Protein of unknown function (DUF2521) J9319_00940 PF01520 N-acetylmuramoyl-L-alanine amidase J9319_00945 PF10609 NUBPL iron-transfer P-loop NTPase J9319_00950 PF17898 Spore germination GerD central core domain J9319_00955 PF14089 KinB-signalling pathway activation in sporulation J9319_00960 PF01522 Polysaccharide deacetylase J9319_00990 PF00916 Sulfate permease family J9319_00990 PF01740 STAS domain J9319_00995 PF01758 Sodium Bile acid symporter family J9319_01000 PF07075 Protein of unknown function (DUF1343) J9319_01005 PF00933 Glycosyl hydrolase family 3 N terminal domain J9319_01005 PF01915 Glycosyl hydrolase family 3 C-terminal domain J9319_01010 PF00144 Beta-lactamase J9319_01015 PF02378 Phosphotransferase system, EIIC J9319_01015 PF00367 phosphotransferase system, EIIB J9319_01020 PF01380 SIS domain J9319_01020 PF01418 Helix-turn-helix domain, rpiR family J9319_01025 PF13580 SIS domain J9319_01055 PF00491 Arginase family J9319_01060 PF04542 Sigma-70 region 2 J9319_01060 PF08281 Sigma-70, region 4 J9319_01065 PF13490 Putative zinc-finger J9319_01070 PF02457 DisA bacterial checkpoint controller nucleotide-binding J9319_01075 PF07949 YbbR-like protein J9319_01080 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain J9319_01080 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I J9319_01080 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II J9319_01080 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III J9319_01085 PF01380 SIS domain J9319_01100 PF00005 ABC transporter J9319_01100 PF13732 Domain of unknown function (DUF4162) J9319_01110 PF00005 ABC transporter J9319_01110 PF02687 FtsX-like permease family J9319_01110 PF12704 MacB-like periplasmic core domain J9319_01115 PF00005 ABC transporter J9319_01115 PF02687 FtsX-like permease family J9319_01115 PF12704 MacB-like periplasmic core domain J9319_01120 PF03551 Transcriptional regulator PadR-like family J9319_01120 PF10400 Virulence activator alpha C-term J9319_01130 PF00005 ABC transporter J9319_01145 PF13905 Thioredoxin-like J9319_01155 PF04235 Protein of unknown function (DUF418) J9319_01165 PF00005 ABC transporter J9319_01175 PF01381 Helix-turn-helix J9319_01185 PF00561 alpha/beta hydrolase fold J9319_01190 PF12833 Helix-turn-helix domain J9319_01205 PF00005 ABC transporter J9319_01220 PF00324 Amino acid permease J9319_01225 PF03009 Glycerophosphoryl diester phosphodiesterase family J9319_01230 PF07690 Major Facilitator Superfamily J9319_01240 PF03190 Protein of unknown function, DUF255 J9319_01245 PF00109 Beta-ketoacyl synthase, N-terminal domain J9319_01245 PF02801 Beta-ketoacyl synthase, C-terminal domain J9319_01275 PF02583 Metal-sensitive transcriptional repressor J9319_01280 PF13686 DsrE/DsrF/DrsH-like family J9319_01290 PF01206 Sulfurtransferase TusA J9319_01290 PF00581 Rhodanese-like domain J9319_01295 PF00753 Metallo-beta-lactamase superfamily J9319_01295 PF00581 Rhodanese-like domain J9319_01300 PF01206 Sulfurtransferase TusA J9319_01305 PF01925 Sulfite exporter TauE/SafE J9319_01315 PF03129 Anticodon binding domain J9319_01315 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) J9319_01315 PF09180 Prolyl-tRNA synthetase, C-terminal J9319_01320 PF07690 Major Facilitator Superfamily J9319_01335 PF01047 MarR family J9319_01340 PF04463 Protein of unknown function (DUF523) J9319_01345 PF00248 Aldo/keto reductase family J9319_01350 PF00465 Iron-containing alcohol dehydrogenase J9319_01355 PF17773 UPF0176 acylphosphatase like domain J9319_01355 PF12368 Rhodanase C-terminal J9319_01355 PF00581 Rhodanese-like domain J9319_01360 PF13520 Amino acid permease J9319_01370 PF00874 PRD domain J9319_01370 PF03123 CAT RNA binding domain J9319_01375 PF00367 phosphotransferase system, EIIB J9319_01375 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 J9319_01375 PF02378 Phosphotransferase system, EIIC J9319_01380 PF00232 Glycosyl hydrolase family 1 J9319_01395 PF05043 Mga helix-turn-helix domain J9319_01395 PF08279 HTH domain J9319_01395 PF00874 PRD domain J9319_01395 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 J9319_01400 PF00480 ROK family J9319_01405 PF01074 Glycosyl hydrolases family 38 N-terminal domain J9319_01405 PF07748 Glycosyl hydrolases family 38 C-terminal domain J9319_01405 PF09261 Alpha mannosidase middle domain J9319_01415 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit J9319_01420 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 J9319_01420 PF00381 PTS HPr component phosphorylation site J9319_01425 PF00082 Subtilase family J9319_01425 PF17936 Bacterial Ig domain J9319_01440 PF00324 Amino acid permease J9319_01445 PF02574 Homocysteine S-methyltransferase J9319_01450 PF10035 Uncharacterized protein conserved in bacteria (DUF2179) J9319_01450 PF02588 Uncharacterised 5xTM membrane BCR, YitT family COG1284 J9319_01455 PF03551 Transcriptional regulator PadR-like family J9319_01470 PF07690 Major Facilitator Superfamily J9319_01475 PF00583 Acetyltransferase (GNAT) family J9319_01490 PF00082 Subtilase family J9319_01495 PF01425 Amidase J9319_01500 PF00440 Bacterial regulatory proteins, tetR family J9319_01505 PF07883 Cupin domain J9319_01510 PF01047 MarR family J9319_01515 PF00501 AMP-binding enzyme J9319_01515 PF13193 AMP-binding enzyme C-terminal domain J9319_01520 PF13520 Amino acid permease J9319_01530 PF00561 alpha/beta hydrolase fold J9319_01535 PF01235 Sodium:alanine symporter family J9319_01540 PF04960 Glutaminase J9319_01545 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase J9319_01550 PF00072 Response regulator receiver domain J9319_01550 PF08664 YcbB domain J9319_01555 PF05225 helix-turn-helix, Psq domain J9319_01555 PF02810 SEC-C motif J9319_01560 PF17118 Domain of unknown function (DUF5105) J9319_01560 PF11611 Domain of unknown function (DUF4352) J9319_01565 PF00248 Aldo/keto reductase family J9319_01570 PF14501 GHKL domain J9319_01575 PF00072 Response regulator receiver domain J9319_01575 PF04397 LytTr DNA-binding domain J9319_01580 PF00005 ABC transporter J9319_01585 PF12679 ABC-2 family transporter protein J9319_01600 PF11611 Domain of unknown function (DUF4352) J9319_01600 PF17118 Domain of unknown function (DUF5105) J9319_01605 PF07486 Cell Wall Hydrolase J9319_01620 PF00296 Luciferase-like monooxygenase J9319_01625 PF02342 TerD domain J9319_01630 PF02342 TerD domain J9319_01635 PF02342 TerD domain J9319_01640 PF03741 Integral membrane protein TerC family J9319_01665 PF14266 Putative component of 'biosynthetic module' J9319_01670 PF05816 Toxic anion resistance protein (TelA) J9319_01675 PF00005 ABC transporter J9319_01675 PF00571 CBS domain J9319_01680 PF00528 Binding-protein-dependent transport system inner membrane component J9319_01685 PF04069 Substrate binding domain of ABC-type glycine betaine transport system J9319_01700 PF01546 Peptidase family M20/M25/M40 J9319_01700 PF07687 Peptidase dimerisation domain J9319_01705 PF03606 C4-dicarboxylate anaerobic carrier J9319_01710 PF02866 lactate/malate dehydrogenase, alpha/beta C-terminal domain J9319_01710 PF00056 lactate/malate dehydrogenase, NAD binding domain J9319_01715 PF02652 L-lactate permease J9319_01720 PF00356 Bacterial regulatory proteins, lacI family J9319_01725 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family J9319_01730 PF05116 Sucrose-6F-phosphate phosphohydrolase J9319_01735 PF02894 Oxidoreductase family, C-terminal alpha/beta domain J9319_01735 PF01408 Oxidoreductase family, NAD-binding Rossmann fold J9319_01740 PF07690 Major Facilitator Superfamily J9319_01745 PF01810 LysE type translocator J9319_01755 PF10852 Protein of unknown function (DUF2651) J9319_01760 PF08892 YqcI/YcgG family J9319_01765 PF00324 Amino acid permease J9319_01770 PF09347 Domain of unknown function (DUF1989) J9319_01775 PF02540 NAD synthase J9319_01785 PF00171 Aldehyde dehydrogenase family J9319_01790 PF01487 Type I 3-dehydroquinase J9319_01795 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain J9319_01795 PF00205 Thiamine pyrophosphate enzyme, central domain J9319_01795 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain J9319_01805 PF02515 CoA-transferase family III J9319_01810 PF07690 Major Facilitator Superfamily J9319_01820 PF09339 IclR helix-turn-helix domain J9319_01820 PF01614 Bacterial transcriptional regulator J9319_01825 PF01202 Shikimate kinase J9319_01830 PF00701 Dihydrodipicolinate synthetase family J9319_01835 PF00356 Bacterial regulatory proteins, lacI family J9319_01840 PF07690 Major Facilitator Superfamily J9319_01845 PF08241 Methyltransferase domain J9319_01850 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family J9319_01850 PF03466 LysR substrate binding domain J9319_01855 PF00795 Carbon-nitrogen hydrolase J9319_01860 PF05448 Acetyl xylan esterase (AXE1) J9319_01870 PF10127 RNA repair pathway DNA polymerase beta family J9319_01875 PF01619 Proline dehydrogenase J9319_01880 PF00171 Aldehyde dehydrogenase family J9319_01885 PF13556 PucR C-terminal helix-turn-helix domain J9319_01885 PF17853 GGDEF-like domain J9319_01890 PF02040 Arsenical pump membrane protein J9319_01895 PF00528 Binding-protein-dependent transport system inner membrane component J9319_01900 PF00497 Bacterial extracellular solute-binding proteins, family 3 J9319_01905 PF10925 Protein of unknown function (DUF2680) J9319_01910 PF12706 Beta-lactamase superfamily domain J9319_01915 PF01037 Lrp/AsnC ligand binding domain J9319_01920 PF02522 Aminoglycoside 3-N-acetyltransferase J9319_01925 PF11033 Competence protein J (ComJ) J9319_01930 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain J9319_01930 PF17202 Single cache domain 3 J9319_01930 PF00672 HAMP domain J9319_01935 PF14040 Deoxyribonuclease NucA/NucB J9319_01940 PF05378 Hydantoinase/oxoprolinase N-terminal region J9319_01940 PF01968 Hydantoinase/oxoprolinase J9319_01955 PF00005 ABC transporter J9319_01955 PF08402 TOBE domain J9319_01960 PF00528 Binding-protein-dependent transport system inner membrane component J9319_01965 PF00528 Binding-protein-dependent transport system inner membrane component J9319_01970 PF00501 AMP-binding enzyme J9319_01970 PF00668 Condensation domain J9319_01970 PF00550 Phosphopantetheine attachment site J9319_01970 PF13193 AMP-binding enzyme C-terminal domain J9319_01975 PF00501 AMP-binding enzyme J9319_01975 PF13193 AMP-binding enzyme C-terminal domain J9319_01975 PF00668 Condensation domain J9319_01975 PF00550 Phosphopantetheine attachment site J9319_01980 PF00550 Phosphopantetheine attachment site J9319_01980 PF00975 Thioesterase domain J9319_01980 PF13193 AMP-binding enzyme C-terminal domain J9319_01980 PF00501 AMP-binding enzyme J9319_01980 PF00668 Condensation domain J9319_01985 PF00501 AMP-binding enzyme J9319_01985 PF13193 AMP-binding enzyme C-terminal domain J9319_01985 PF00668 Condensation domain J9319_01985 PF00550 Phosphopantetheine attachment site J9319_01990 PF00501 AMP-binding enzyme J9319_01990 PF13193 AMP-binding enzyme C-terminal domain J9319_01990 PF00668 Condensation domain J9319_01990 PF00550 Phosphopantetheine attachment site J9319_01995 PF00975 Thioesterase domain J9319_02000 PF00892 EamA-like transporter family J9319_02005 PF00155 Aminotransferase class I and II J9319_02005 PF00392 Bacterial regulatory proteins, gntR family J9319_02010 PF01648 4'-phosphopantetheinyl transferase superfamily J9319_02015 PF06445 GyrI-like small molecule binding domain J9319_02015 PF12833 Helix-turn-helix domain J9319_02030 PF00005 ABC transporter J9319_02035 PF00528 Binding-protein-dependent transport system inner membrane component J9319_02040 PF00497 Bacterial extracellular solute-binding proteins, family 3 J9319_02045 PF01738 Dienelactone hydrolase family J9319_02050 PF00324 Amino acid permease J9319_02055 PF00854 POT family J9319_02060 PF13229 Right handed beta helix region J9319_02060 PF12708 Pectate lyase superfamily protein J9319_02065 PF00296 Luciferase-like monooxygenase J9319_02070 PF00583 Acetyltransferase (GNAT) family J9319_02075 PF00497 Bacterial extracellular solute-binding proteins, family 3 J9319_02080 PF00528 Binding-protein-dependent transport system inner membrane component J9319_02085 PF00005 ABC transporter J9319_02090 PF01546 Peptidase family M20/M25/M40 J9319_02090 PF07687 Peptidase dimerisation domain J9319_02095 PF03972 MmgE/PrpD family J9319_02100 PF00072 Response regulator receiver domain J9319_02100 PF00486 Transcriptional regulatory protein, C terminal J9319_02105 PF00672 HAMP domain J9319_02105 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase J9319_02105 PF00512 His Kinase A (phospho-acceptor) domain J9319_02110 PF14361 RsbT co-antagonist protein rsbRD N-terminal domain J9319_02110 PF01740 STAS domain J9319_02115 PF00696 Amino acid kinase family J9319_02115 PF13840 ACT domain J9319_02120 PF07690 Major Facilitator Superfamily J9319_02125 PF00440 Bacterial regulatory proteins, tetR family J9319_02130 PF01022 Bacterial regulatory protein, arsR family J9319_02140 PF03466 LysR substrate binding domain J9319_02140 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family J9319_02145 PF00155 Aminotransferase class I and II J9319_02145 PF00392 Bacterial regulatory proteins, gntR family J9319_02150 PF00202 Aminotransferase class-III J9319_02155 PF13520 Amino acid permease J9319_02160 PF00171 Aldehyde dehydrogenase family J9319_02165 PF02525 Flavodoxin-like fold J9319_02170 PF07987 Domain of unkown function (DUF1775) J9319_02175 PF04234 CopC domain J9319_02175 PF05425 Copper resistance protein D J9319_02175 PF13115 YtkA-like J9319_02180 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit J9319_02180 PF02378 Phosphotransferase system, EIIC J9319_02185 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 J9319_02190 PF01232 Mannitol dehydrogenase Rossmann domain J9319_02190 PF08125 Mannitol dehydrogenase C-terminal domain J9319_02195 PF02743 Cache domain J9319_02195 PF00672 HAMP domain J9319_02195 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain J9319_02230 PF12681 Glyoxalase-like domain J9319_02235 PF05901 Excalibur calcium-binding domain J9319_02245 PF03746 LamB/YcsF family J9319_02250 PF01566 Natural resistance-associated macrophage protein J9319_02255 PF07286 Protein of unknown function (DUF1445) J9319_02260 PF02682 Carboxyltransferase domain, subdomain C and D J9319_02265 PF02626 Carboxyltransferase domain, subdomain A and B J9319_02270 PF01614 Bacterial transcriptional regulator J9319_02270 PF09339 IclR helix-turn-helix domain J9319_02275 PF02525 Flavodoxin-like fold J9319_02280 PF13472 GDSL-like Lipase/Acylhydrolase family J9319_02290 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 J9319_02290 PF00874 PRD domain J9319_02290 PF05043 Mga helix-turn-helix domain J9319_02290 PF08279 HTH domain J9319_02290 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit J9319_02295 PF13649 Methyltransferase domain J9319_02305 PF16242 Pyridoxamine 5'-phosphate oxidase like J9319_02325 PF12823 Domain of unknown function (DUF3817) J9319_02335 PF01751 Toprim domain J9319_02335 PF01131 DNA topoisomerase J9319_02345 PF00990 Diguanylate cyclase, GGDEF domain J9319_02350 PF10096 Uncharacterized protein conserved in bacteria (DUF2334) J9319_02360 PF03170 Bacterial cellulose synthase subunit J9319_02365 PF13520 Amino acid permease J9319_02370 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain J9319_02370 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain J9319_02370 PF00205 Thiamine pyrophosphate enzyme, central domain J9319_02375 PF14449 Pre-toxin TG J9319_02375 PF14410 HNH/ENDO VII superfamily nuclease with conserved GHE residues J9319_02375 PF04740 LXG domain of WXG superfamily J9319_02395 PF13302 Acetyltransferase (GNAT) domain J9319_02400 PF01566 Natural resistance-associated macrophage protein J9319_02405 PF04226 Transglycosylase associated protein J9319_02410 PF12787 EcsC protein family J9319_02415 PF03480 Bacterial extracellular solute-binding protein, family 7 J9319_02420 PF14689 Sensor_kinase_SpoOB-type, alpha-helical domain J9319_02420 PF17203 Single cache domain 3 J9319_02420 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase J9319_02425 PF08279 HTH domain J9319_02425 PF00072 Response regulator receiver domain J9319_02430 PF00375 Sodium:dicarboxylate symporter family J9319_02435 PF01594 AI-2E family transporter J9319_02440 PF00375 Sodium:dicarboxylate symporter family J9319_02445 PF00005 ABC transporter J9319_02460 PF13040 Fur-regulated basic protein B J9319_02465 PF00085 Thioredoxin J9319_02470 PF07478 D-ala D-ala ligase C-terminus J9319_02470 PF01820 D-ala D-ala ligase N-terminus J9319_02475 PF01225 Mur ligase family, catalytic domain J9319_02475 PF02875 Mur ligase family, glutamate ligase domain J9319_02475 PF08245 Mur ligase middle domain J9319_02480 PF12146 Serine aminopeptidase, S33 J9319_02490 PF00270 DEAD/DEAH box helicase J9319_02490 PF00271 Helicase conserved C-terminal domain J9319_02495 PF03703 Bacterial PH domain J9319_02500 PF03703 Bacterial PH domain J9319_02505 PF01694 Rhomboid family J9319_02510 PF01648 4'-phosphopantetheinyl transferase superfamily J9319_02520 PF01168 Alanine racemase, N-terminal domain J9319_02520 PF00842 Alanine racemase, C-terminal domain J9319_02525 PF01402 Ribbon-helix-helix protein, copG family J9319_02530 PF02452 PemK-like, MazF-like toxin of type II toxin-antitoxin system J9319_02535 PF08678 Rsbr N terminal J9319_02535 PF01740 STAS domain J9319_02540 PF01740 STAS domain J9319_02545 PF13581 Histidine kinase-like ATPase domain J9319_02550 PF08673 Phosphoserine phosphatase RsbU, N-terminal domain J9319_02550 PF07228 Stage II sporulation protein E (SpoIIE) J9319_02555 PF01740 STAS domain J9319_02560 PF13581 Histidine kinase-like ATPase domain J9319_02565 PF04542 Sigma-70 region 2 J9319_02565 PF04539 Sigma-70 region 3 J9319_02565 PF04545 Sigma-70, region 4 J9319_02570 PF07228 Stage II sporulation protein E (SpoIIE) J9319_02575 PF16921 Tex protein YqgF-like domain J9319_02575 PF17674 HHH domain J9319_02575 PF00575 S1 RNA binding domain J9319_02575 PF09371 Tex-like protein N-terminal domain J9319_02585 PF10263 SprT-like family J9319_02585 PF17283 SprT-like zinc ribbon domain J9319_02645 PF00313 'Cold-shock' DNA-binding domain J9319_02650 PF02559 CarD-like/TRCF domain J9319_02655 PF08240 Alcohol dehydrogenase GroES-like domain J9319_02655 PF00107 Zinc-binding dehydrogenase J9319_02660 PF13411 MerR HTH family regulatory protein J9319_02665 PF00722 Glycosyl hydrolases family 16 J9319_02675 PF00440 Bacterial regulatory proteins, tetR family J9319_02680 PF07690 Major Facilitator Superfamily J9319_02685 PF07859 alpha/beta hydrolase fold J9319_02695 PF00106 short chain dehydrogenase J9319_02705 PF17763 Glutaminase/Asparaginase C-terminal domain J9319_02705 PF00710 Asparaginase, N-terminal J9319_02720 PF00440 Bacterial regulatory proteins, tetR family J9319_02720 PF16925 Tetracyclin repressor-like, C-terminal domain J9319_02725 PF07690 Major Facilitator Superfamily J9319_02730 PF01757 Acyltransferase family J9319_02735 PF03176 MMPL family J9319_02740 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase J9319_02740 PF07730 Histidine kinase J9319_02745 PF00196 Bacterial regulatory proteins, luxR family J9319_02745 PF00072 Response regulator receiver domain J9319_02775 PF00583 Acetyltransferase (GNAT) family J9319_02780 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily J9319_02790 PF00440 Bacterial regulatory proteins, tetR family J9319_02795 PF01872 RibD C-terminal domain J9319_02800 PF01047 MarR family J9319_02805 PF00881 Nitroreductase family J9319_02820 PF01381 Helix-turn-helix J9319_02820 PF07883 Cupin domain J9319_02825 PF01810 LysE type translocator J9319_02830 PF00583 Acetyltransferase (GNAT) family J9319_02840 PF01596 O-methyltransferase J9319_02850 PF03591 AzlC protein J9319_02855 PF00892 EamA-like transporter family J9319_02865 PF00375 Sodium:dicarboxylate symporter family J9319_02905 PF00586 AIR synthase related protein, N-terminal domain J9319_02905 PF02769 AIR synthase related protein, C-terminal domain J9319_02910 PF02367 Threonylcarbamoyl adenosine biosynthesis protein TsaE J9319_02915 PF00814 Glycoprotease family J9319_02920 PF00583 Acetyltransferase (GNAT) family J9319_02925 PF00814 Glycoprotease family J9319_02930 PF16326 ABC transporter C-terminal domain J9319_02930 PF12848 ABC transporter J9319_02930 PF00005 ABC transporter J9319_02935 PF01967 MoaC family J9319_02940 PF02629 CoA binding domain J9319_02940 PF06971 Putative DNA-binding protein N-terminus J9319_02945 PF02416 mttA/Hcf106 family J9319_02950 PF00902 Sec-independent protein translocase protein (TatC) J9319_02960 PF14146 Domain of unknown function (DUF4305) J9319_02965 PF02517 CPBP intramembrane metalloprotease J9319_02970 PF00166 Chaperonin 10 Kd subunit J9319_02975 PF00118 TCP-1/cpn60 chaperonin family J9319_02980 PF01047 MarR family J9319_02985 PF04299 Putative FMN-binding domain J9319_02990 PF02557 D-alanyl-D-alanine carboxypeptidase J9319_03015 PF03330 Lytic transglycolase J9319_03020 PF07676 WD40-like Beta Propeller Repeat J9319_03030 PF00394 Multicopper oxidase J9319_03030 PF07731 Multicopper oxidase J9319_03030 PF07732 Multicopper oxidase J9319_03035 PF00324 Amino acid permease J9319_03040 PF16916 Dimerisation domain of Zinc Transporter J9319_03040 PF01545 Cation efflux family J9319_03045 PF17863 AAA lid domain J9319_03045 PF07726 ATPase family associated with various cellular activities (AAA) J9319_03050 PF01882 Protein of unknown function DUF58 J9319_03055 PF11992 Domain of unknown function (DUF3488) J9319_03055 PF13559 Domain of unknown function (DUF4129) J9319_03055 PF01841 Transglutaminase-like superfamily J9319_03060 PF00117 Glutamine amidotransferase class-I J9319_03060 PF00958 GMP synthase C terminal domain J9319_03060 PF02540 NAD synthase J9319_03070 PF04073 Aminoacyl-tRNA editing domain J9319_03075 PF02311 AraC-like ligand binding domain J9319_03075 PF12833 Helix-turn-helix domain J9319_03080 PF00682 HMGL-like J9319_03080 PF08502 LeuA allosteric (dimerisation) domain J9319_03085 PF12833 Helix-turn-helix domain J9319_03110 PF00072 Response regulator receiver domain J9319_03110 PF04397 LytTr DNA-binding domain J9319_03115 PF13302 Acetyltransferase (GNAT) domain J9319_03125 PF08281 Sigma-70, region 4 J9319_03125 PF04542 Sigma-70 region 2 J9319_03135 PF07690 Major Facilitator Superfamily J9319_03140 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family J9319_03140 PF03466 LysR substrate binding domain J9319_03145 PF00860 Permease family J9319_03155 PF10055 Uncharacterized small protein (DUF2292) J9319_03165 PF10035 Uncharacterized protein conserved in bacteria (DUF2179) J9319_03170 PF14044 NETI protein J9319_03175 PF00731 AIR carboxylase J9319_03180 PF17769 Phosphoribosylaminoimidazole carboxylase C-terminal domain J9319_03180 PF02222 ATP-grasp domain J9319_03185 PF00206 Lyase J9319_03185 PF10397 Adenylosuccinate lyase C-terminus J9319_03190 PF01259 SAICAR synthetase J9319_03195 PF02700 Phosphoribosylformylglycinamidine (FGAM) synthase J9319_03205 PF18072 Formylglycinamide ribonucleotide amidotransferase linker domain J9319_03205 PF00586 AIR synthase related protein, N-terminal domain J9319_03205 PF02769 AIR synthase related protein, C-terminal domain J9319_03210 PF00156 Phosphoribosyl transferase domain J9319_03215 PF00586 AIR synthase related protein, N-terminal domain J9319_03215 PF02769 AIR synthase related protein, C-terminal domain J9319_03220 PF00551 Formyl transferase J9319_03225 PF01808 AICARFT/IMPCHase bienzyme J9319_03225 PF02142 MGS-like domain J9319_03230 PF01071 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain J9319_03230 PF02843 Phosphoribosylglycinamide synthetase, C domain J9319_03230 PF02844 Phosphoribosylglycinamide synthetase, N domain J9319_03250 PF00202 Aminotransferase class-III J9319_03255 PF01144 Coenzyme A transferase J9319_03260 PF01144 Coenzyme A transferase J9319_03265 PF07687 Peptidase dimerisation domain J9319_03265 PF01546 Peptidase family M20/M25/M40 J9319_03270 PF11127 Protein of unknown function (DUF2892) J9319_03275 PF13382 Adenine deaminase C-terminal domain J9319_03275 PF01979 Amidohydrolase family J9319_03280 PF01371 Trp repressor protein J9319_03290 PF01645 Conserved region in glutamate synthase J9319_03305 PF01884 PcrB family J9319_03310 PF00580 UvrD/REP helicase N-terminal domain J9319_03310 PF13361 UvrD-like helicase C-terminal domain J9319_03315 PF00533 BRCA1 C Terminus (BRCT) domain J9319_03315 PF01653 NAD-dependent DNA ligase adenylation domain J9319_03315 PF12826 Helix-hairpin-helix motif J9319_03315 PF03119 NAD-dependent DNA ligase C4 zinc finger domain J9319_03315 PF03120 NAD-dependent DNA ligase OB-fold domain J9319_03320 PF07537 CamS sex pheromone cAM373 precursor J9319_03325 PF01636 Phosphotransferase enzyme family J9319_03330 PF02308 MgtC family J9319_03335 PF00474 Sodium:solute symporter family J9319_03340 PF02686 Glu-tRNAGln amidotransferase C subunit J9319_03345 PF01425 Amidase J9319_03350 PF02934 GatB/GatE catalytic domain J9319_03350 PF02637 GatB domain J9319_03355 PF00440 Bacterial regulatory proteins, tetR family J9319_03360 PF00873 AcrB/AcrD/AcrF family J9319_03370 PF01156 Inosine-uridine preferring nucleoside hydrolase J9319_03375 PF00781 Diacylglycerol kinase catalytic domain J9319_03380 PF01938 TRAM domain J9319_03380 PF05958 tRNA (Uracil-5-)-methyltransferase J9319_03440 PF01207 Dihydrouridine synthase (Dus) J9319_03455 PF02082 Transcriptional regulator J9319_03460 PF07992 Pyridine nucleotide-disulphide oxidoreductase J9319_03470 PF13021 Domain of unknown function (DUF3885) J9319_03475 PF11975 Family 4 glycosyl hydrolase C-terminal domain J9319_03475 PF02056 Family 4 glycosyl hydrolase J9319_03480 PF01418 Helix-turn-helix domain, rpiR family J9319_03480 PF01380 SIS domain J9319_03495 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family J9319_03495 PF03466 LysR substrate binding domain J9319_03505 PF13037 Domain of unknown function (DUF3898) J9319_03505 PF13039 Protein of unknown function (DUF3900) J9319_03515 PF00483 Nucleotidyl transferase J9319_03520 PF16363 GDP-mannose 4,6 dehydratase J9319_03525 PF03407 Nucleotide-diphospho-sugar transferase J9319_03530 PF00535 Glycosyl transferase family 2 J9319_03535 PF03407 Nucleotide-diphospho-sugar transferase J9319_03540 PF07690 Major Facilitator Superfamily J9319_03545 PF03717 Penicillin-binding Protein dimerisation domain J9319_03545 PF00905 Penicillin binding protein transpeptidase domain J9319_03545 PF05223 NTF2-like N-terminal transpeptidase domain J9319_03550 PF00939 Sodium:sulfate symporter transmembrane region J9319_03565 PF00011 Hsp20/alpha crystallin family J9319_03580 PF13520 Amino acid permease J9319_03585 PF13181 Tetratricopeptide repeat J9319_03585 PF00535 Glycosyl transferase family 2 J9319_03590 PF12848 ABC transporter J9319_03590 PF00005 ABC transporter J9319_03590 PF16326 ABC transporter C-terminal domain J9319_03595 PF02649 Type I GTP cyclohydrolase folE2 J9319_03600 PF13411 MerR HTH family regulatory protein J9319_03605 PF07690 Major Facilitator Superfamily J9319_03610 PF12848 ABC transporter J9319_03610 PF00005 ABC transporter J9319_03615 PF00271 Helicase conserved C-terminal domain J9319_03615 PF00270 DEAD/DEAH box helicase J9319_03620 PF16884 N-terminal domain of oxidoreductase J9319_03620 PF00107 Zinc-binding dehydrogenase J9319_03625 PF11486 Protein of unknown function (DUF3212) J9319_03630 PF11181 Heat induced stress protein YflT J9319_03640 PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase J9319_03640 PF00925 GTP cyclohydrolase II J9319_03645 PF03781 Sulfatase-modifying factor enzyme 1 J9319_03655 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region J9319_03655 PF01872 RibD C-terminal domain J9319_03665 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase J9319_03665 PF14689 Sensor_kinase_SpoOB-type, alpha-helical domain J9319_03670 PF00072 Response regulator receiver domain J9319_03670 PF12431 Transcriptional regulator J9319_03670 PF08279 HTH domain J9319_03675 PF03401 Tripartite tricarboxylate transporter family receptor J9319_03680 PF03600 Citrate transporter J9319_03690 PF05870 Phenolic acid decarboxylase (PAD) J9319_03695 PF03551 Transcriptional regulator PadR-like family J9319_03695 PF10400 Virulence activator alpha C-term J9319_03700 PF02898 Nitric oxide synthase, oxygenase domain J9319_03710 PF00708 Acylphosphatase J9319_03715 PF03475 3-alpha domain J9319_03715 PF03473 MOSC domain J9319_03720 PF11121 Protein of unknown function (DUF2639) J9319_03730 PF00557 Metallopeptidase family M24 J9319_03735 PF02378 Phosphotransferase system, EIIC J9319_03735 PF00367 phosphotransferase system, EIIB J9319_03740 PF05675 Protein of unknown function (DUF817) J9319_03750 PF14172 Domain of unknown function (DUF4309) J9319_03755 PF00884 Sulfatase J9319_03760 PF00282 Pyridoxal-dependent decarboxylase conserved domain J9319_03765 PF00672 HAMP domain J9319_03765 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain J9319_03770 PF09350 Domain of unknown function (DUF1992) J9319_03775 PF00367 phosphotransferase system, EIIB J9319_03775 PF02378 Phosphotransferase system, EIIC J9319_03780 PF16657 Maltogenic Amylase, C-terminal domain J9319_03780 PF00128 Alpha amylase, catalytic domain J9319_03785 PF07702 UTRA domain J9319_03785 PF00392 Bacterial regulatory proteins, gntR family J9319_03795 PF00149 Calcineurin-like phosphoesterase J9319_03795 PF02872 5'-nucleotidase, C-terminal domain J9319_03800 PF01965 DJ-1/PfpI family J9319_03805 PF06569 Protein of unknown function (DUF1128) J9319_03810 PF01235 Sodium:alanine symporter family J9319_03815 PF01451 Low molecular weight phosphotyrosine protein phosphatase J9319_03825 PF03631 Virulence factor BrkB J9319_03835 PF07690 Major Facilitator Superfamily J9319_03845 PF01699 Sodium/calcium exchanger protein J9319_03850 PF14167 YfkD-like protein J9319_03855 PF01709 Transcriptional regulator J9319_03865 PF00924 Mechanosensitive ion channel J9319_03870 PF04055 Radical SAM superfamily J9319_03870 PF08756 YfkB-like domain J9319_03880 PF01522 Polysaccharide deacetylase J9319_03885 PF10898 Protein of unknown function (DUF2716) J9319_03890 PF01544 CorA-like Mg2+ transporter protein J9319_03900 PF00730 HhH-GPD superfamily base excision DNA repair protein J9319_03905 PF01938 TRAM domain J9319_03905 PF05958 tRNA (Uracil-5-)-methyltransferase J9319_03920 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family J9319_03920 PF03466 LysR substrate binding domain J9319_03925 PF14552 Tautomerase enzyme J9319_03930 PF02627 Carboxymuconolactone decarboxylase family J9319_03935 PF13411 MerR HTH family regulatory protein J9319_03935 PF07739 TipAS antibiotic-recognition domain J9319_03940 PF07690 Major Facilitator Superfamily J9319_03955 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) J9319_03955 PF02824 TGS domain J9319_03955 PF03129 Anticodon binding domain J9319_03955 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain J9319_04000 PF00893 Small Multidrug Resistance protein J9319_04005 PF00893 Small Multidrug Resistance protein J9319_04010 PF17934 Tetracyclin repressor-like, C-terminal domain J9319_04010 PF00440 Bacterial regulatory proteins, tetR family J9319_04025 PF00657 GDSL-like Lipase/Acylhydrolase J9319_04030 PF07992 Pyridine nucleotide-disulphide oxidoreductase J9319_04035 PF02805 Metal binding domain of Ada J9319_04035 PF12833 Helix-turn-helix domain J9319_04040 PF01497 Periplasmic binding protein J9319_04045 PF00005 ABC transporter J9319_04045 PF00664 ABC transporter transmembrane region J9319_04050 PF02694 Uncharacterised BCR, YnfA/UPF0060 family J9319_04055 PF04542 Sigma-70 region 2 J9319_04055 PF04545 Sigma-70, region 4 J9319_04070 PF08240 Alcohol dehydrogenase GroES-like domain J9319_04070 PF00107 Zinc-binding dehydrogenase J9319_04075 PF12867 DinB superfamily J9319_04085 PF01047 MarR family J9319_04090 PF09924 Uncharacterised conserved protein (DUF2156) J9319_04090 PF03706 Lysylphosphatidylglycerol synthase TM region J9319_04105 PF18801 response regulator aspartate phosphatase H, N terminal J9319_04110 PF00881 Nitroreductase family J9319_04125 PF01370 NAD dependent epimerase/dehydratase family J9319_04125 PF08338 Domain of unknown function (DUF1731) J9319_04130 PF02631 RecX family J9319_04135 PF08838 Protein of unknown function (DUF1811) J9319_04145 PF08176 Small acid-soluble spore protein K family J9319_04150 PF14043 WVELL protein J9319_04155 PF00535 Glycosyl transferase family 2 J9319_04160 PF09586 Bacterial membrane protein YfhO J9319_04165 PF01494 FAD binding domain J9319_04180 PF00190 Cupin J9319_04185 PF12841 YvrJ protein family J9319_04190 PF04545 Sigma-70, region 4 J9319_04200 PF04307 LexA-binding, inner membrane-associated putative hydrolase J9319_04205 PF14815 NUDIX domain J9319_04205 PF00730 HhH-GPD superfamily base excision DNA repair protein J9319_04220 PF04259 Small, acid-soluble spore protein, gamma-type J9319_04230 PF04167 Protein of unknown function (DUF402) J9319_04235 PF00664 ABC transporter transmembrane region J9319_04235 PF00005 ABC transporter J9319_04240 PF08352 Oligopeptide/dipeptide transporter, C-terminal region J9319_04240 PF00005 ABC transporter J9319_04245 PF08352 Oligopeptide/dipeptide transporter, C-terminal region J9319_04245 PF00005 ABC transporter J9319_04250 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle J9319_04255 PF00528 Binding-protein-dependent transport system inner membrane component J9319_04260 PF00528 Binding-protein-dependent transport system inner membrane component J9319_04260 PF12911 N-terminal TM domain of oligopeptide transport permease C J9319_04265 PF06081 Aromatic acid exporter family member 1 J9319_04270 PF00202 Aminotransferase class-III J9319_04275 PF00578 AhpC/TSA family J9319_04280 PF01475 Ferric uptake regulator family J9319_04285 PF11023 Zinc-ribbon containing domain J9319_04290 PF18576 Helix-turn-helix domain J9319_04290 PF14540 Nucleotidyltransferase-like J9319_04430 PF00884 Sulfatase J9319_04435 PF10502 Signal peptidase, peptidase S26 J9319_04440 PF01053 Cys/Met metabolism PLP-dependent enzyme J9319_04450 PF00005 ABC transporter J9319_04455 PF09084 NMT1/THI5 like J9319_04460 PF00528 Binding-protein-dependent transport system inner membrane component J9319_04465 PF00296 Luciferase-like monooxygenase J9319_04480 PF00005 ABC transporter J9319_04515 PF08331 Domain of unknown function (DUF1730) J9319_04520 PF12671 Putative amidase domain J9319_04525 PF00588 SpoU rRNA Methylase family J9319_04530 PF08298 PrkA AAA domain J9319_04530 PF06798 PrkA serine protein kinase C-terminal domain J9319_04535 PF04285 Protein of unknown function (DUF444) J9319_04545 PF07690 Major Facilitator Superfamily J9319_04550 PF03358 NADPH-dependent FMN reductase J9319_04560 PF00313 'Cold-shock' DNA-binding domain J9319_04565 PF00990 Diguanylate cyclase, GGDEF domain J9319_04565 PF07694 5TMR of 5TMR-LYT J9319_04580 PF09580 Sporulation lipoprotein YhcN/YlaJ (Spore_YhcN_YlaJ) J9319_04590 PF07875 Coat F domain J9319_04595 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase J9319_04595 PF00512 His Kinase A (phospho-acceptor) domain J9319_04595 PF00989 PAS fold J9319_04595 PF13188 PAS domain J9319_04595 PF13426 PAS domain J9319_04600 PF02872 5'-nucleotidase, C-terminal domain J9319_04600 PF00746 LPXTG cell wall anchor motif J9319_04600 PF00149 Calcineurin-like phosphoesterase J9319_04600 PF00565 Staphylococcal nuclease homologue J9319_04605 PF04203 Sortase domain J9319_04610 PF01479 S4 domain J9319_04610 PF00849 RNA pseudouridylate synthase J9319_04620 PF13419 Haloacid dehalogenase-like hydrolase J9319_04625 PF00583 Acetyltransferase (GNAT) family J9319_04625 PF00795 Carbon-nitrogen hydrolase J9319_04645 PF17853 GGDEF-like domain J9319_04645 PF05651 Putative sugar diacid recognition J9319_04645 PF13556 PucR C-terminal helix-turn-helix domain J9319_04650 PF00202 Aminotransferase class-III J9319_04655 PF04309 Glycerol-3-phosphate responsive antiterminator J9319_04660 PF00230 Major intrinsic protein J9319_04665 PF02782 FGGY family of carbohydrate kinases, C-terminal domain J9319_04665 PF00370 FGGY family of carbohydrate kinases, N-terminal domain J9319_04670 PF01266 FAD dependent oxidoreductase J9319_04670 PF16901 C-terminal domain of alpha-glycerophosphate oxidase J9319_04675 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain J9319_04675 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III J9319_04675 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I J9319_04675 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II J9319_04680 PF13185 GAF domain J9319_04680 PF07730 Histidine kinase J9319_04685 PF00196 Bacterial regulatory proteins, luxR family J9319_04685 PF00072 Response regulator receiver domain J9319_04690 PF14148 YhdB-like protein J9319_04695 PF13028 Protein of unknown function (DUF3889) J9319_04700 PF00199 Catalase J9319_04700 PF06628 Catalase-related immune-responsive J9319_04705 PF02082 Transcriptional regulator J9319_04710 PF00970 Oxidoreductase FAD-binding domain J9319_04710 PF00042 Globin J9319_04710 PF00175 Oxidoreductase NAD-binding domain J9319_04715 PF04293 SpoVR like protein J9319_04720 PF00245 Alkaline phosphatase J9319_04725 PF01476 LysM domain J9319_04725 PF00877 NlpC/P60 family J9319_04730 PF13520 Amino acid permease J9319_04735 PF17453 Sigma-M inhibitor J9319_04740 PF13791 Sigma factor regulator C-terminal J9319_04740 PF13800 Sigma factor regulator N-terminal J9319_04745 PF08281 Sigma-70, region 4 J9319_04745 PF04542 Sigma-70 region 2 J9319_04750 PF01553 Acyltransferase J9319_04755 PF00571 CBS domain J9319_04755 PF03471 Transporter associated domain J9319_04755 PF01595 Cyclin M transmembrane N-terminal domain J9319_04760 PF13411 MerR HTH family regulatory protein J9319_04765 PF00571 CBS domain J9319_04765 PF03471 Transporter associated domain J9319_04765 PF01595 Cyclin M transmembrane N-terminal domain J9319_04775 PF02537 CrcB-like protein, Camphor Resistance (CrcB) J9319_04780 PF02537 CrcB-like protein, Camphor Resistance (CrcB) J9319_04785 PF03009 Glycerophosphoryl diester phosphodiesterase family J9319_04790 PF17444 Uncharacterized YhdX-like J9319_04795 PF00924 Mechanosensitive ion channel J9319_04800 PF02146 Sir2 family J9319_04805 PF01522 Polysaccharide deacetylase J9319_04810 PF01063 Amino-transferase class IV J9319_04815 PF00582 Universal stress protein family J9319_04820 PF00664 ABC transporter transmembrane region J9319_04820 PF00005 ABC transporter J9319_04825 PF00664 ABC transporter transmembrane region J9319_04825 PF00005 ABC transporter J9319_04835 PF13460 NAD(P)H-binding J9319_04840 PF00269 Small, acid-soluble spore proteins, alpha/beta type J9319_04845 PF17912 MalK OB fold domain J9319_04845 PF03459 TOBE domain J9319_04845 PF00005 ABC transporter J9319_04850 PF13556 PucR C-terminal helix-turn-helix domain J9319_04855 PF17277 Family of unknown function (DUF5342) J9319_04860 PF14398 YheC/D like ATP-grasp J9319_04865 PF14398 YheC/D like ATP-grasp J9319_04870 PF04286 Protein of unknown function (DUF445) J9319_04875 PF06133 Control of competence regulator ComK, YlbF/YmcA J9319_04885 PF04055 Radical SAM superfamily J9319_04890 PF13434 L-lysine 6-monooxygenase (NADPH-requiring) J9319_04895 PF00999 Sodium/hydrogen exchanger family J9319_04900 PF02080 TrkA-C domain J9319_04910 PF00378 Enoyl-CoA hydratase/isomerase J9319_04915 PF14120 YhzD-like protein J9319_04920 PF00149 Calcineurin-like phosphoesterase J9319_04925 PF13514 AAA domain J9319_04930 PF01966 HD domain J9319_04935 PF14147 Sporulation protein YhaL J9319_04945 PF09680 Family of unknown function J9319_04950 PF09680 Family of unknown function J9319_04955 PF11667 Putative zincin peptidase J9319_04960 PF08963 Protein of unknown function (DUF1878) J9319_04965 PF01047 MarR family J9319_04970 PF12732 YtxH-like protein J9319_04980 PF17099 Tryptophan transporter TrpP J9319_04985 PF00266 Aminotransferase class-V J9319_04990 PF01230 HIT domain J9319_04995 PF00005 ABC transporter J9319_05000 PF05975 Bacterial ABC transporter protein EcsB J9319_05005 PF12787 EcsC protein family J9319_05010 PF07687 Peptidase dimerisation domain J9319_05010 PF01546 Peptidase family M20/M25/M40 J9319_05020 PF03992 Antibiotic biosynthesis monooxygenase J9319_05025 PF00912 Transglycosylase J9319_05025 PF00905 Penicillin binding protein transpeptidase domain J9319_05030 PF01208 Uroporphyrinogen decarboxylase (URO-D) J9319_05035 PF00762 Ferrochelatase J9319_05040 PF01593 Flavin containing amine oxidoreductase J9319_05045 PF17932 Tetracyclin repressor-like, C-terminal domain J9319_05045 PF00440 Bacterial regulatory proteins, tetR family J9319_05055 PF05343 M42 glutamyl aminopeptidase J9319_05060 PF00375 Sodium:dicarboxylate symporter family J9319_05065 PF14149 YhfH-like protein J9319_05070 PF12706 Beta-lactamase superfamily domain J9319_05075 PF10437 Bacterial lipoate protein ligase C-terminus J9319_05075 PF03099 Biotin/lipoate A/B protein ligase family J9319_05080 PF00501 AMP-binding enzyme J9319_05080 PF13193 AMP-binding enzyme C-terminal domain J9319_05090 PF16491 CAAX prenyl protease N-terminal, five membrane helices J9319_05090 PF01435 Peptidase family M48 J9319_05095 PF00082 Subtilase family J9319_05095 PF05922 Peptidase inhibitor I9 J9319_05100 PF00300 Histidine phosphatase superfamily (branch 1) J9319_05105 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain J9319_05110 PF01266 FAD dependent oxidoreductase J9319_05110 PF00355 Rieske [2Fe-2S] domain J9319_05120 PF08858 IDEAL domain J9319_05125 PF06338 ComK protein J9319_05130 PF01168 Alanine racemase, N-terminal domain J9319_05130 PF14031 Putative serine dehydratase domain J9319_05140 PF00155 Aminotransferase class I and II J9319_05140 PF00392 Bacterial regulatory proteins, gntR family J9319_05145 PF07690 Major Facilitator Superfamily J9319_05150 PF01337 Barstar (barnase inhibitor) J9319_05155 PF01032 FecCD transport family J9319_05160 PF01032 FecCD transport family J9319_05165 PF00005 ABC transporter J9319_05170 PF01497 Periplasmic binding protein J9319_05175 PF03816 Cell envelope-related transcriptional attenuator domain J9319_05190 PF09335 SNARE associated Golgi protein J9319_05195 PF10502 Signal peptidase, peptidase S26 J9319_05200 PF05145 Transition state regulatory protein AbrB J9319_05215 PF07681 DoxX J9319_05220 PF02915 Rubrerythrin J9319_05225 PF12705 PD-(D/E)XK nuclease superfamily J9319_05230 PF13361 UvrD-like helicase C-terminal domain J9319_05230 PF12705 PD-(D/E)XK nuclease superfamily J9319_05230 PF00580 UvrD/REP helicase N-terminal domain J9319_05235 PF12320 Type 5 capsule protein repressor C-terminal domain J9319_05235 PF00149 Calcineurin-like phosphoesterase J9319_05240 PF13476 AAA domain J9319_05250 PF10676 Spore germination protein gerPA/gerPF J9319_05255 PF10970 Spore germination protein GerPE J9319_05265 PF10737 Spore germination protein GerPC J9319_05270 PF10803 Spore germination GerPB J9319_05275 PF10676 Spore germination protein gerPA/gerPF J9319_05285 PF08757 CotH kinase protein J9319_05295 PF01557 Fumarylacetoacetate (FAA) hydrolase family J9319_05300 PF07457 Protein of unknown function (DUF1516) J9319_05305 PF10949 Protein of unknown function (DUF2777) J9319_05310 PF00733 Asparagine synthase J9319_05310 PF13537 Glutamine amidotransferase domain J9319_05315 PF01593 Flavin containing amine oxidoreductase J9319_05320 PF01593 Flavin containing amine oxidoreductase J9319_05330 PF01554 MatE J9319_05335 PF02311 AraC-like ligand binding domain J9319_05335 PF12833 Helix-turn-helix domain J9319_05355 PF00202 Aminotransferase class-III J9319_05360 PF00282 Pyridoxal-dependent decarboxylase conserved domain J9319_05365 PF04183 IucA / IucC family J9319_05365 PF06276 Ferric iron reductase FhuF-like transporter J9319_05375 PF13434 L-lysine 6-monooxygenase (NADPH-requiring) J9319_05380 PF06276 Ferric iron reductase FhuF-like transporter J9319_05380 PF04183 IucA / IucC family J9319_05395 PF02310 B12 binding domain J9319_05395 PF02607 B12 binding domain J9319_05395 PF02965 Vitamin B12 dependent methionine synthase, activation domain J9319_05395 PF00809 Pterin binding enzyme J9319_05395 PF02574 Homocysteine S-methyltransferase J9319_05400 PF02219 Methylenetetrahydrofolate reductase J9319_05400 PF02574 Homocysteine S-methyltransferase J9319_05405 PF04461 Protein of unknown function (DUF520) J9319_05410 PF17783 CvfB-like winged helix domain J9319_05410 PF13509 S1 domain J9319_05415 PF02608 ABC transporter substrate-binding protein PnrA-like J9319_05420 PF02743 Cache domain J9319_05420 PF00672 HAMP domain J9319_05420 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain J9319_05425 PF02645 Uncharacterised protein, DegV family COG1307 J9319_05430 PF02588 Uncharacterised 5xTM membrane BCR, YitT family COG1284 J9319_05430 PF10035 Uncharacterized protein conserved in bacteria (DUF2179) J9319_05435 PF12690 Intracellular proteinase inhibitor J9319_05440 PF12758 Protein of unknown function (DUF3813) J9319_05455 PF00326 Prolyl oligopeptidase family J9319_05460 PF01883 Iron-sulfur cluster assembly protein J9319_05465 PF01565 FAD binding domain J9319_05470 PF07690 Major Facilitator Superfamily J9319_05475 PF02774 Semialdehyde dehydrogenase, dimerisation domain J9319_05475 PF01118 Semialdehyde dehydrogenase, NAD binding domain J9319_05480 PF01960 ArgJ family J9319_05485 PF00696 Amino acid kinase family J9319_05490 PF00202 Aminotransferase class-III J9319_05495 PF00988 Carbamoyl-phosphate synthase small chain, CPSase domain J9319_05495 PF00117 Glutamine amidotransferase class-I J9319_05500 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain J9319_05500 PF02787 Carbamoyl-phosphate synthetase large chain, oligomerisation domain J9319_05505 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain J9319_05505 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain J9319_05510 PF14168 YjzC-like protein J9319_05515 PF07690 Major Facilitator Superfamily J9319_05520 PF11151 Protein of unknown function (DUF2929) J9319_05535 PF02608 ABC transporter substrate-binding protein PnrA-like J9319_05540 PF10815 ComZ J9319_05550 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III J9319_05550 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal J9319_05555 PF00109 Beta-ketoacyl synthase, N-terminal domain J9319_05555 PF02801 Beta-ketoacyl synthase, C-terminal domain J9319_05560 PF10026 Predicted Zn-dependent protease (DUF2268) J9319_05565 PF08352 Oligopeptide/dipeptide transporter, C-terminal region J9319_05565 PF00005 ABC transporter J9319_05570 PF00005 ABC transporter J9319_05570 PF08352 Oligopeptide/dipeptide transporter, C-terminal region J9319_05575 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle J9319_05580 PF00528 Binding-protein-dependent transport system inner membrane component J9319_05585 PF12911 N-terminal TM domain of oligopeptide transport permease C J9319_05585 PF00528 Binding-protein-dependent transport system inner membrane component J9319_05590 PF12227 Protein of unknown function (DUF3603) J9319_05595 PF00579 tRNA synthetases class I (W and Y) J9319_05605 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle J9319_05610 PF00528 Binding-protein-dependent transport system inner membrane component J9319_05615 PF00528 Binding-protein-dependent transport system inner membrane component J9319_05615 PF12911 N-terminal TM domain of oligopeptide transport permease C J9319_05620 PF00005 ABC transporter J9319_05620 PF08352 Oligopeptide/dipeptide transporter, C-terminal region J9319_05625 PF00005 ABC transporter J9319_05625 PF08352 Oligopeptide/dipeptide transporter, C-terminal region J9319_05635 PF13508 Acetyltransferase (GNAT) domain J9319_05640 PF03960 ArsC family J9319_05645 PF03741 Integral membrane protein TerC family J9319_05650 PF05389 Negative regulator of genetic competence (MecA) J9319_05655 PF13091 PLD-like domain J9319_05655 PF13396 Phospholipase_D-nuclease N-terminal J9319_05665 PF01432 Peptidase family M3 J9319_05665 PF08439 Oligopeptidase F J9319_05680 PF01152 Bacterial-like globin J9319_05685 PF01464 Transglycosylase SLT domain J9319_05690 PF01928 CYTH domain J9319_05700 PF04607 Region found in RelA / SpoT proteins J9319_05705 PF01513 ATP-NAD kinase J9319_05710 PF00849 RNA pseudouridylate synthase J9319_05715 PF00149 Calcineurin-like phosphoesterase J9319_05720 PF00999 Sodium/hydrogen exchanger family J9319_05720 PF02080 TrkA-C domain J9319_05720 PF02254 TrkA-N domain J9319_05725 PF03070 TENA/THI-4/PQQC family J9319_05730 PF02581 Thiamine monophosphate synthase J9319_05735 PF01266 FAD dependent oxidoreductase J9319_05740 PF02597 ThiS family J9319_05745 PF05690 Thiazole biosynthesis protein ThiG J9319_05750 PF00899 ThiF family J9319_05755 PF08543 Phosphomethylpyrimidine kinase J9319_05765 PF14153 Spore coat protein CotO J9319_05770 PF10612 Spore coat protein Z J9319_05775 PF10612 Spore coat protein Z J9319_05780 PF07552 Spore Coat Protein X and V domain J9319_05790 PF07552 Spore Coat Protein X and V domain J9319_05795 PF07098 Protein of unknown function (DUF1360) J9319_05810 PF14069 Stage VI sporulation protein F J9319_05815 PF13361 UvrD-like helicase C-terminal domain J9319_05815 PF00580 UvrD/REP helicase N-terminal domain J9319_05825 PF13673 Acetyltransferase (GNAT) domain J9319_05835 PF00756 Putative esterase J9319_05840 PF01053 Cys/Met metabolism PLP-dependent enzyme J9319_05845 PF01053 Cys/Met metabolism PLP-dependent enzyme J9319_05855 PF14659 Phage integrase, N-terminal SAM-like domain J9319_05855 PF00589 Phage integrase family J9319_05860 PF06114 IrrE N-terminal-like domain J9319_05870 PF01381 Helix-turn-helix J9319_05875 PF01381 Helix-turn-helix J9319_05905 PF09466 Hypothetical protein Yqai J9319_05930 PF03796 DnaB-like helicase C terminal domain J9319_05930 PF00772 DnaB-like helicase N terminal domain J9319_05940 PF05866 Endodeoxyribonuclease RusA J9319_05975 PF14410 HNH/ENDO VII superfamily nuclease with conserved GHE residues J9319_05975 PF04740 LXG domain of WXG superfamily J9319_05975 PF14449 Pre-toxin TG J9319_06020 PF17288 Terminase RNAseH like domain J9319_06020 PF04466 Phage terminase large subunit J9319_06025 PF04860 Phage portal protein J9319_06030 PF04233 Phage Mu protein F like protein J9319_06040 PF14550 Putative phage serine protease XkdF J9319_06045 PF05065 Phage capsid family J9319_06050 PF14553 YqbF, hypothetical protein domain J9319_06055 PF11436 Protein of unknown function (DUF3199) J9319_06060 PF12206 Domain of unknown function (DUF3599) J9319_06065 PF04883 Bacteriophage HK97-gp10, putative tail-component J9319_06080 PF17481 Phage tail sheath protein beta-sandwich domain J9319_06080 PF17482 Phage tail sheath C-terminal domain J9319_06080 PF04984 Phage tail sheath protein subtilisin-like domain J9319_06085 PF09393 Phage tail tube protein J9319_06095 PF08890 Phage XkdN-like tail assembly chaperone protein, TAC J9319_06100 PF01464 Transglycosylase SLT domain J9319_06100 PF01464 Transglycosylase SLT domain J9319_06105 PF01476 LysM domain J9319_06115 PF10844 Protein of unknown function (DUF2577) J9319_06120 PF10934 Protein of unknown function (DUF2634) J9319_06125 PF04865 Baseplate J-like protein J9319_06130 PF10076 Uncharacterised protein conserved in bacteria (DUF2313) J9319_06155 PF10960 BhlA holin family J9319_06160 PF04688 SPP1 phage holin J9319_06165 PF01510 N-acetylmuramoyl-L-alanine amidase J9319_06165 PF01471 Putative peptidoglycan binding domain J9319_06180 PF13614 AAA domain J9319_06215 PF02899 Phage integrase, N-terminal SAM-like domain J9319_06215 PF00589 Phage integrase family J9319_06265 PF14163 Super-infection exclusion protein B J9319_06275 PF03255 Acetyl co-enzyme A carboxylase carboxyltransferase alpha subunit J9319_06290 PF00302 Chloramphenicol acetyltransferase J9319_06295 PF13176 Tetratricopeptide repeat J9319_06295 PF18801 response regulator aspartate phosphatase H, N terminal J9319_06310 PF03466 LysR substrate binding domain J9319_06310 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family J9319_06315 PF01177 Asp/Glu/Hydantoin racemase J9319_06330 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family J9319_06330 PF03466 LysR substrate binding domain J9319_06335 PF07690 Major Facilitator Superfamily J9319_06340 PF07992 Pyridine nucleotide-disulphide oxidoreductase J9319_06340 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain J9319_06355 PF18801 response regulator aspartate phosphatase H, N terminal J9319_06370 PF00842 Alanine racemase, C-terminal domain J9319_06370 PF01168 Alanine racemase, N-terminal domain J9319_06375 PF08240 Alcohol dehydrogenase GroES-like domain J9319_06375 PF00107 Zinc-binding dehydrogenase J9319_06380 PF00440 Bacterial regulatory proteins, tetR family J9319_06390 PF00700 Bacterial flagellin C-terminal helical region J9319_06390 PF00669 Bacterial flagellin N-terminal helical region J9319_06395 PF00669 Bacterial flagellin N-terminal helical region J9319_06395 PF00700 Bacterial flagellin C-terminal helical region J9319_06400 PF01494 FAD binding domain J9319_06415 PF05908 Poly-gamma-glutamate hydrolase J9319_06420 PF06114 IrrE N-terminal-like domain J9319_06425 PF01510 N-acetylmuramoyl-L-alanine amidase J9319_06425 PF01476 LysM domain J9319_06425 PF01471 Putative peptidoglycan binding domain J9319_06430 PF14185 Antitoxin SpoIISB, type II toxin-antitoxin system J9319_06435 PF14171 Toxin SpoIISA, type II toxin-antitoxin system J9319_06440 PF01384 Phosphate transporter family J9319_06445 PF01865 Protein of unknown function DUF47 J9319_06465 PF00528 Binding-protein-dependent transport system inner membrane component J9319_06470 PF00528 Binding-protein-dependent transport system inner membrane component J9319_06475 PF00005 ABC transporter J9319_06475 PF17850 CysA C-terminal regulatory domain J9319_06475 PF12857 TOBE-like domain J9319_06485 PF03611 PTS system sugar-specific permease component J9319_06500 PF08240 Alcohol dehydrogenase GroES-like domain J9319_06500 PF00107 Zinc-binding dehydrogenase J9319_06505 PF00676 Dehydrogenase E1 component J9319_06510 PF02780 Transketolase, C-terminal domain J9319_06510 PF00364 Biotin-requiring enzyme J9319_06510 PF02779 Transketolase, pyrimidine binding domain J9319_06515 PF02817 e3 binding domain J9319_06515 PF00364 Biotin-requiring enzyme J9319_06515 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) J9319_06520 PF07992 Pyridine nucleotide-disulphide oxidoreductase J9319_06520 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain J9319_06535 PF04198 Putative sugar-binding domain J9319_06545 PF13520 Amino acid permease J9319_06550 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily J9319_06555 PF13180 PDZ domain J9319_06560 PF14748 Pyrroline-5-carboxylate reductase dimerisation J9319_06560 PF03807 NADP oxidoreductase coenzyme F420-dependent J9319_06565 PF04951 D-aminopeptidase J9319_06570 PF00528 Binding-protein-dependent transport system inner membrane component J9319_06575 PF12911 N-terminal TM domain of oligopeptide transport permease C J9319_06575 PF00528 Binding-protein-dependent transport system inner membrane component J9319_06580 PF08352 Oligopeptide/dipeptide transporter, C-terminal region J9319_06580 PF00005 ABC transporter J9319_06585 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle J9319_06590 PF02016 LD-carboxypeptidase N-terminal domain J9319_06590 PF17676 LD-carboxypeptidase C-terminal domain J9319_06595 PF13378 Enolase C-terminal domain-like J9319_06595 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain J9319_06600 PF00877 NlpC/P60 family J9319_06605 PF08352 Oligopeptide/dipeptide transporter, C-terminal region J9319_06605 PF00005 ABC transporter J9319_06615 PF03061 Thioesterase superfamily J9319_06620 PF03551 Transcriptional regulator PadR-like family J9319_06635 PF13302 Acetyltransferase (GNAT) domain J9319_06640 PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain J9319_06640 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain J9319_06640 PF02805 Metal binding domain of Ada J9319_06640 PF12833 Helix-turn-helix domain J9319_06645 PF00893 Small Multidrug Resistance protein J9319_06650 PF00893 Small Multidrug Resistance protein J9319_06660 PF01842 ACT domain J9319_06660 PF00551 Formyl transferase J9319_06665 PF00696 Amino acid kinase family J9319_06665 PF01472 PUA domain J9319_06670 PF00171 Aldehyde dehydrogenase family J9319_06675 PF18801 response regulator aspartate phosphatase H, N terminal J9319_06685 PF02566 OsmC-like protein J9319_06690 PF01047 MarR family J9319_06695 PF02566 OsmC-like protein J9319_06700 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region J9319_06705 PF08267 Cobalamin-independent synthase, N-terminal domain J9319_06705 PF01717 Cobalamin-independent synthase, Catalytic domain J9319_06710 PF00082 Subtilase family J9319_06725 PF00072 Response regulator receiver domain J9319_06725 PF00486 Transcriptional regulatory protein, C terminal J9319_06730 PF00672 HAMP domain J9319_06730 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase J9319_06730 PF00512 His Kinase A (phospho-acceptor) domain J9319_06735 PF03413 Peptidase propeptide and YPEB domain J9319_06740 PF03413 Peptidase propeptide and YPEB domain J9319_06750 PF03448 MgtE intracellular N domain J9319_06750 PF01769 Divalent cation transporter J9319_06750 PF00571 CBS domain J9319_06760 PF03466 LysR substrate binding domain J9319_06760 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family J9319_06770 PF13411 MerR HTH family regulatory protein J9319_06785 PF01047 MarR family J9319_06790 PF00563 EAL domain J9319_06790 PF00990 Diguanylate cyclase, GGDEF domain J9319_06790 PF03707 Bacterial signalling protein N terminal repeat J9319_06795 PF09335 SNARE associated Golgi protein J9319_06800 PF03741 Integral membrane protein TerC family J9319_06805 PF04542 Sigma-70 region 2 J9319_06810 PF12791 Anti-sigma factor N-terminus J9319_06815 PF00269 Small, acid-soluble spore proteins, alpha/beta type J9319_06820 PF08876 Domain of unknown function (DUF1836) J9319_06825 PF01435 Peptidase family M48 J9319_06830 PF02386 Cation transport protein J9319_06835 PF04239 Protein of unknown function (DUF421) J9319_06850 PF01757 Acyltransferase family J9319_06855 PF13426 PAS domain J9319_06855 PF13188 PAS domain J9319_06855 PF00989 PAS fold J9319_06855 PF00512 His Kinase A (phospho-acceptor) domain J9319_06855 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase J9319_06860 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain J9319_06860 PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain J9319_06865 PF01008 Initiation factor 2 subunit family J9319_06870 PF01636 Phosphotransferase enzyme family J9319_06875 PF00155 Aminotransferase class I and II J9319_06880 PF00016 Ribulose bisphosphate carboxylase large chain, catalytic domain J9319_06880 PF02788 Ribulose bisphosphate carboxylase large chain, N-terminal domain J9319_06890 PF00596 Class II Aldolase and Adducin N-terminal domain J9319_06895 PF03079 ARD/ARD' family J9319_06900 PF09388 Spo0E like sporulation regulatory protein J9319_06905 PF02743 Cache domain J9319_06905 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase J9319_06905 PF00512 His Kinase A (phospho-acceptor) domain J9319_06910 PF01047 MarR family J9319_06915 PF13677 Membrane MotB of proton-channel complex MotA/MotB J9319_06915 PF00691 OmpA family J9319_06920 PF01618 MotA/TolQ/ExbB proton channel family J9319_06930 PF07724 AAA domain (Cdc48 subfamily) J9319_06930 PF17871 AAA lid domain J9319_06930 PF10431 C-terminal, D2-small domain, of ClpB protein J9319_06930 PF00004 ATPase family associated with various cellular activities (AAA) J9319_06940 PF06508 Queuosine biosynthesis protein QueC J9319_06945 PF01242 6-pyruvoyl tetrahydropterin synthase J9319_06950 PF04055 Radical SAM superfamily J9319_06955 PF14489 QueF-like protein J9319_06965 PF13302 Acetyltransferase (GNAT) domain J9319_06970 PF09953 Uncharacterized protein conserved in bacteria (DUF2187) J9319_06980 PF07486 Cell Wall Hydrolase J9319_06985 PF01943 Polysaccharide biosynthesis protein J9319_06990 PF00578 AhpC/TSA family J9319_07000 PF00557 Metallopeptidase family M24 J9319_07000 PF01321 Creatinase/Prolidase N-terminal domain J9319_07005 PF00356 Bacterial regulatory proteins, lacI family J9319_07005 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family J9319_07010 PF03123 CAT RNA binding domain J9319_07010 PF00874 PRD domain J9319_07015 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 J9319_07015 PF00367 phosphotransferase system, EIIB J9319_07015 PF02378 Phosphotransferase system, EIIC J9319_07020 PF00381 PTS HPr component phosphorylation site J9319_07025 PF05524 PEP-utilising enzyme, N-terminal J9319_07025 PF00391 PEP-utilising enzyme, mobile domain J9319_07025 PF02896 PEP-utilising enzyme, TIM barrel domain J9319_07030 PF11132 Transcriptional regulator protein (SplA) J9319_07040 PF02743 Cache domain J9319_07040 PF00672 HAMP domain J9319_07040 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain J9319_07045 PF00106 short chain dehydrogenase J9319_07050 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase J9319_07050 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase J9319_07055 PF00188 Cysteine-rich secretory protein family J9319_07060 PF03717 Penicillin-binding Protein dimerisation domain J9319_07060 PF00905 Penicillin binding protein transpeptidase domain J9319_07065 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase J9319_07065 PF00512 His Kinase A (phospho-acceptor) domain J9319_07065 PF00989 PAS fold J9319_07065 PF08447 PAS fold J9319_07070 PF00155 Aminotransferase class I and II J9319_07075 PF01545 Cation efflux family J9319_07075 PF16916 Dimerisation domain of Zinc Transporter J9319_07085 PF06271 RDD family J9319_07095 PF01584 CheW-like domain J9319_07095 PF00072 Response regulator receiver domain J9319_07100 PF14177 YkyB-like protein J9319_07115 PF07690 Major Facilitator Superfamily J9319_07120 PF01476 LysM domain J9319_07120 PF03734 L,D-transpeptidase catalytic domain J9319_07125 PF00149 Calcineurin-like phosphoesterase J9319_07125 PF10518 TAT (twin-arginine translocation) pathway signal sequence J9319_07135 PF00563 EAL domain J9319_07135 PF10388 EAL-domain associated signalling protein domain J9319_07140 PF05067 Manganese containing catalase J9319_07145 PF08796 Protein of unknown function (DUF1797) J9319_07150 PF04308 Ribonuclease H-like J9319_07155 PF14156 Antirepressor AbbA J9319_07165 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family J9319_07165 PF03466 LysR substrate binding domain J9319_07175 PF00258 Flavodoxin J9319_07185 PF00258 Flavodoxin J9319_07190 PF08503 Tetrahydrodipicolinate succinyltransferase N-terminal J9319_07190 PF00132 Bacterial transferase hexapeptide (six repeats) J9319_07190 PF14602 Hexapeptide repeat of succinyl-transferase J9319_07195 PF07687 Peptidase dimerisation domain J9319_07195 PF01546 Peptidase family M20/M25/M40 J9319_07200 PF03698 Uncharacterised protein family (UPF0180) J9319_07205 PF00924 Mechanosensitive ion channel J9319_07210 PF10417 C-terminal domain of 1-Cys peroxiredoxin J9319_07210 PF00578 AhpC/TSA family J9319_07215 PF00578 AhpC/TSA family J9319_07230 PF12804 MobA-like NTP transferase domain J9319_07235 PF00899 ThiF family J9319_07240 PF03454 MoeA C-terminal region (domain IV) J9319_07240 PF00994 Probable molybdopterin binding domain J9319_07240 PF03453 MoeA N-terminal region (domain I and II) J9319_07245 PF03205 Molybdopterin guanine dinucleotide synthesis protein B J9319_07250 PF02391 MoaE protein J9319_07255 PF02597 ThiS family J9319_07270 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion J9319_07275 PF00005 ABC transporter J9319_07280 PF12704 MacB-like periplasmic core domain J9319_07280 PF02687 FtsX-like permease family J9319_07285 PF00455 DeoR C terminal sensor domain J9319_07285 PF08220 DeoR-like helix-turn-helix domain J9319_07290 PF00294 pfkB family carbohydrate kinase J9319_07295 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit J9319_07295 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 J9319_07300 PF10502 Signal peptidase, peptidase S26 J9319_07310 PF00005 ABC transporter J9319_07310 PF12848 ABC transporter J9319_07315 PF02073 Thermophilic metalloprotease (M29) J9319_07320 PF17447 Uncharacterized YkpC-like J9319_07330 PF18277 AbrB C-terminal domain J9319_07330 PF04014 Antidote-toxin recognition MazE, bacterial antitoxin J9319_07335 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase J9319_07335 PF00512 His Kinase A (phospho-acceptor) domain J9319_07335 PF00989 PAS fold J9319_07340 PF06094 Gamma-glutamyl cyclotransferase, AIG2-like J9319_07345 PF02080 TrkA-C domain J9319_07345 PF02254 TrkA-N domain J9319_07350 PF13382 Adenine deaminase C-terminal domain J9319_07350 PF01979 Amidohydrolase family J9319_07355 PF00753 Metallo-beta-lactamase superfamily J9319_07355 PF17770 Ribonuclease J C-terminal domain J9319_07355 PF07521 Zn-dependent metallo-hydrolase RNA specificity domain J9319_07360 PF07288 Protein of unknown function (DUF1447) J9319_07370 PF01327 Polypeptide deformylase J9319_07385 PF00676 Dehydrogenase E1 component J9319_07390 PF02779 Transketolase, pyrimidine binding domain J9319_07390 PF02780 Transketolase, C-terminal domain J9319_07395 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) J9319_07395 PF00364 Biotin-requiring enzyme J9319_07395 PF02817 e3 binding domain J9319_07400 PF07992 Pyridine nucleotide-disulphide oxidoreductase J9319_07400 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain J9319_07410 PF13790 SR1 protein J9319_07415 PF01276 Orn/Lys/Arg decarboxylase, major domain J9319_07415 PF03711 Orn/Lys/Arg decarboxylase, C-terminal domain J9319_07420 PF05256 Uncharacterised protein family (UPF0223) J9319_07425 PF06335 Protein of unknown function (DUF1054) J9319_07435 PF00459 Inositol monophosphatase family J9319_07450 PF13490 Putative zinc-finger J9319_07465 PF03144 Elongation factor Tu domain 2 J9319_07465 PF00009 Elongation factor Tu GTP binding domain J9319_07465 PF14492 Elongation Factor G, domain II J9319_07465 PF00679 Elongation factor G C-terminus J9319_07470 PF14036 YlaH-like protein J9319_07475 PF09963 Uncharacterized protein conserved in bacteria (DUF2197) J9319_07480 PF09580 Sporulation lipoprotein YhcN/YlaJ (Spore_YhcN_YlaJ) J9319_07485 PF02562 PhoH-like protein J9319_07485 PF13638 PIN domain J9319_07495 PF04960 Glutaminase J9319_07500 PF07408 Protein of unknown function (DUF1507) J9319_07505 PF01098 Cell cycle protein J9319_07510 PF00364 Biotin-requiring enzyme J9319_07510 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain J9319_07510 PF02436 Conserved carboxylase domain J9319_07510 PF00682 HMGL-like J9319_07510 PF00289 Biotin carboxylase, N-terminal domain J9319_07510 PF02785 Biotin carboxylase C-terminal domain J9319_07515 PF03441 FAD binding domain of DNA photolyase J9319_07515 PF00875 DNA photolyase J9319_07520 PF02628 Cytochrome oxidase assembly protein J9319_07525 PF01040 UbiA prenyltransferase family J9319_07530 PF00116 Cytochrome C oxidase subunit II, periplasmic domain J9319_07530 PF00034 Cytochrome c J9319_07530 PF02790 Cytochrome C oxidase subunit II, transmembrane domain J9319_07535 PF00115 Cytochrome C and Quinol oxidase polypeptide I J9319_07540 PF00510 Cytochrome c oxidase subunit III J9319_07545 PF03626 Prokaryotic Cytochrome C oxidase subunit IV J9319_07550 PF09678 Cytochrome c oxidase caa3 assembly factor (Caa3_CtaG) J9319_07555 PF08868 YugN-like family J9319_07560 PF00571 CBS domain J9319_07565 PF00188 Cysteine-rich secretory protein family J9319_07565 PF14504 CAP-associated N-terminal J9319_07570 PF14071 Putative coat protein J9319_07575 PF14003 YlbE-like protein J9319_07585 PF06133 Control of competence regulator ComK, YlbF/YmcA J9319_07590 PF09902 Uncharacterized protein conserved in bacteria (DUF2129) J9319_07600 PF01467 Cytidylyltransferase-like J9319_07605 PF07670 Nucleoside recognition J9319_07610 PF01734 Patatin-like phospholipase J9319_07615 PF05362 Lon protease (S16) C-terminal proteolytic domain J9319_07615 PF13180 PDZ domain J9319_07620 PF05636 HIGH Nucleotidyl Transferase J9319_07625 PF02620 Large ribosomal RNA subunit accumulation protein YceD J9319_07630 PF01783 Ribosomal L32p protein family J9319_07640 PF00583 Acetyltransferase (GNAT) family J9319_07645 PF02558 Ketopantoate reductase PanE/ApbA J9319_07645 PF08546 Ketopantoate reductase PanE/ApbA C terminal J9319_07650 PF10079 Bacillithiol biosynthesis BshC J9319_07655 PF02381 MraZ protein, putative antitoxin-like J9319_07660 PF01795 MraW methylase family J9319_07670 PF00905 Penicillin binding protein transpeptidase domain J9319_07670 PF03717 Penicillin-binding Protein dimerisation domain J9319_07670 PF03793 PASTA domain J9319_07675 PF00905 Penicillin binding protein transpeptidase domain J9319_07675 PF03717 Penicillin-binding Protein dimerisation domain J9319_07675 PF03793 PASTA domain J9319_07680 PF08245 Mur ligase middle domain J9319_07680 PF02875 Mur ligase family, glutamate ligase domain J9319_07680 PF01225 Mur ligase family, catalytic domain J9319_07685 PF00953 Glycosyl transferase family 4 J9319_07685 PF10555 Phospho-N-acetylmuramoyl-pentapeptide-transferase signature 1 J9319_07690 PF02875 Mur ligase family, glutamate ligase domain J9319_07690 PF08245 Mur ligase middle domain J9319_07695 PF01098 Cell cycle protein J9319_07700 PF04101 Glycosyltransferase family 28 C-terminal domain J9319_07700 PF03033 Glycosyltransferase family 28 N-terminal domain J9319_07705 PF02873 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain J9319_07705 PF01565 FAD binding domain J9319_07710 PF08478 POTRA domain, FtsQ-type J9319_07715 PF05949 Bacterial protein of unknown function (DUF881) J9319_07720 PF05949 Bacterial protein of unknown function (DUF881) J9319_07725 PF06947 Protein of unknown function (DUF1290) J9319_07730 PF02491 SHS2 domain inserted in FTSA J9319_07735 PF00091 Tubulin/FtsZ family, GTPase domain J9319_07735 PF12327 FtsZ family, C-terminal domain J9319_07740 PF05922 Peptidase inhibitor I9 J9319_07740 PF00082 Subtilase family J9319_07745 PF03419 Sporulation factor SpoIIGA J9319_07750 PF04542 Sigma-70 region 2 J9319_07750 PF04545 Sigma-70, region 4 J9319_07755 PF04539 Sigma-70 region 3 J9319_07755 PF04542 Sigma-70 region 2 J9319_07755 PF04545 Sigma-70, region 4 J9319_07760 PF04198 Putative sugar-binding domain J9319_07775 PF03608 PTS system enzyme II sorbitol-specific factor J9319_07780 PF03612 Sorbitol phosphotransferase enzyme II N-terminus J9319_07780 PF07663 Sorbitol phosphotransferase enzyme II C-terminus J9319_07785 PF03829 PTS system glucitol/sorbitol-specific IIA component J9319_07790 PF00005 ABC transporter J9319_07795 PF05239 PRC-barrel domain J9319_07800 PF02578 Multi-copper polyphenol oxidoreductase laccase J9319_07805 PF01168 Alanine racemase, N-terminal domain J9319_07810 PF04472 Cell division protein SepF J9319_07815 PF02325 YGGT family J9319_07820 PF17774 Putative RNA-binding domain in YlmH J9319_07820 PF01479 S4 domain J9319_07825 PF05103 DivIVA protein J9319_07830 PF00133 tRNA synthetases class I (I, L, M and V) J9319_07830 PF08264 Anticodon-binding domain of tRNA J9319_07835 PF01258 Prokaryotic dksA/traR C4-type zinc finger J9319_07840 PF01252 Signal peptidase (SPase) II J9319_07845 PF01479 S4 domain J9319_07845 PF00849 RNA pseudouridylate synthase J9319_07850 PF00156 Phosphoribosyl transferase domain J9319_07855 PF00860 Permease family J9319_07860 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain J9319_07860 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain J9319_07865 PF01979 Amidohydrolase family J9319_07870 PF00988 Carbamoyl-phosphate synthase small chain, CPSase domain J9319_07870 PF00117 Glutamine amidotransferase class-I J9319_07875 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain J9319_07875 PF02142 MGS-like domain J9319_07875 PF02787 Carbamoyl-phosphate synthetase large chain, oligomerisation domain J9319_07880 PF10418 Iron-sulfur cluster binding domain of dihydroorotate dehydrogenase B J9319_07885 PF01180 Dihydroorotate dehydrogenase J9319_07890 PF00215 Orotidine 5'-phosphate decarboxylase / HUMPS family J9319_07895 PF00156 Phosphoribosyl transferase domain J9319_07905 PF01507 Phosphoadenosine phosphosulfate reductase family J9319_07910 PF01384 Phosphate transporter family J9319_07915 PF01747 ATP-sulfurylase J9319_07915 PF14306 PUA-like domain J9319_07925 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases J9319_07930 PF01903 CbiX J9319_07940 PF05670 NFACT protein RNA binding domain J9319_07945 PF00689 Cation transporting ATPase, C-terminus J9319_07945 PF00690 Cation transporter/ATPase, N-terminus J9319_07950 PF03755 YicC-like family, N-terminal region J9319_07950 PF08340 Domain of unknown function (DUF1732) J9319_07955 PF04025 Domain of unknown function (DUF370) J9319_07960 PF00625 Guanylate kinase J9319_07965 PF01192 RNA polymerase Rpb6 J9319_07970 PF02441 Flavoprotein J9319_07970 PF04127 DNA / pantothenate metabolism flavoprotein J9319_07975 PF17764 3′ DNA-binding domain (3′BD) J9319_07975 PF04851 Type III restriction enzyme, res subunit J9319_07975 PF18319 PriA DNA helicase Cys-rich region (CRR) domain J9319_07975 PF18074 Primosomal protein N C-terminal domain J9319_07975 PF00271 Helicase conserved C-terminal domain J9319_07980 PF01327 Polypeptide deformylase J9319_07985 PF00551 Formyl transferase J9319_07985 PF02911 Formyl transferase, C-terminal domain J9319_07990 PF01189 16S rRNA methyltransferase RsmB/F J9319_07990 PF01029 NusB family J9319_07995 PF04055 Radical SAM superfamily J9319_08005 PF03793 PASTA domain J9319_08005 PF00069 Protein kinase domain J9319_08010 PF16745 RsgA N-terminal domain J9319_08010 PF03193 RsgA GTPase J9319_08015 PF00834 Ribulose-phosphate 3 epimerase family J9319_08020 PF04265 Thiamin pyrophosphokinase, vitamin B1 binding domain J9319_08020 PF04263 Thiamin pyrophosphokinase, catalytic domain J9319_08025 PF08183 Stage V sporulation protein family J9319_08030 PF00830 Ribosomal L28 family J9319_08035 PF03780 Asp23 family, cell envelope-related function J9319_08040 PF13684 Dihydroxyacetone kinase family J9319_08040 PF02734 DAK2 domain J9319_08045 PF01842 ACT domain J9319_08045 PF03315 Serine dehydratase beta chain J9319_08050 PF03313 Serine dehydratase alpha chain J9319_08055 PF00270 DEAD/DEAH box helicase J9319_08055 PF00271 Helicase conserved C-terminal domain J9319_08055 PF17191 RecG wedge domain J9319_08065 PF02504 Fatty acid synthesis protein J9319_08070 PF00698 Acyl transferase domain J9319_08080 PF00550 Phosphopantetheine attachment site J9319_08085 PF00035 Double-stranded RNA binding motif J9319_08085 PF14622 Ribonuclease-III-like J9319_08090 PF02463 RecF/RecN/SMC N terminal domain J9319_08090 PF06470 SMC proteins Flexible Hinge Domain J9319_08095 PF00448 SRP54-type protein, GTPase domain J9319_08095 PF02881 SRP54-type protein, helical bundle domain J9319_08105 PF04297 Putative helix-turn-helix protein, YlxM / p13 like J9319_08110 PF00448 SRP54-type protein, GTPase domain J9319_08110 PF02881 SRP54-type protein, helical bundle domain J9319_08110 PF02978 Signal peptide binding domain J9319_08115 PF00886 Ribosomal protein S16 J9319_08125 PF11068 YlqD protein J9319_08130 PF05239 PRC-barrel domain J9319_08130 PF01782 RimM N-terminal domain J9319_08135 PF01746 tRNA (Guanine-1)-methyltransferase J9319_08140 PF01245 Ribosomal protein L19 J9319_08145 PF01926 50S ribosome-binding GTPase J9319_08150 PF01351 Ribonuclease HII J9319_08160 PF01312 FlhB HrpN YscU SpaS Family J9319_08165 PF00549 CoA-ligase J9319_08165 PF08442 ATP-grasp domain J9319_08170 PF00549 CoA-ligase J9319_08170 PF02629 CoA binding domain J9319_08175 PF02481 DNA recombination-mediator protein A J9319_08180 PF01751 Toprim domain J9319_08180 PF01131 DNA topoisomerase J9319_08180 PF01396 Topoisomerase DNA binding C4 zinc finger J9319_08185 PF01134 Glucose inhibited division protein A J9319_08190 PF02899 Phage integrase, N-terminal SAM-like domain J9319_08190 PF00589 Phage integrase family J9319_08195 PF00227 Proteasome subunit J9319_08200 PF00004 ATPase family associated with various cellular activities (AAA) J9319_08200 PF07724 AAA domain (Cdc48 subfamily) J9319_08200 PF10431 C-terminal, D2-small domain, of ClpB protein J9319_08205 PF06018 CodY GAF-like domain J9319_08205 PF08222 CodY helix-turn-helix domain J9319_08210 PF00460 Flagella basal body rod protein J9319_08215 PF00460 Flagella basal body rod protein J9319_08215 PF06429 Flagellar basal body rod FlgEFG protein C-terminal J9319_08220 PF02049 Flagellar hook-basal body complex protein FliE J9319_08225 PF01514 Secretory protein of YscJ/FliF family J9319_08225 PF08345 Flagellar M-ring protein C-terminal J9319_08230 PF01706 FliG C-terminal domain J9319_08230 PF14841 FliG middle domain J9319_08230 PF14842 FliG N-terminal domain J9319_08235 PF02108 Flagellar assembly protein FliH J9319_08240 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain J9319_08240 PF02874 ATP synthase alpha/beta family, beta-barrel domain J9319_08240 PF18269 T3SS EscN ATPase C-terminal domain J9319_08245 PF02050 Flagellar FliJ protein J9319_08250 PF03448 MgtE intracellular N domain J9319_08255 PF02120 Flagellar hook-length control protein FliK J9319_08260 PF03963 Flagellar hook capping protein - N-terminal region J9319_08265 PF06429 Flagellar basal body rod FlgEFG protein C-terminal J9319_08265 PF00460 Flagella basal body rod protein J9319_08270 PF06289 Flagellar and Swarming motility proteins J9319_08275 PF03748 Flagellar basal body-associated protein FliL J9319_08280 PF02154 Flagellar motor switch protein FliM J9319_08280 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term J9319_08285 PF04509 CheC-like family J9319_08285 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term J9319_08290 PF00072 Response regulator receiver domain J9319_08295 PF04347 Flagellar biosynthesis protein, FliO J9319_08300 PF00813 FliP family J9319_08305 PF01313 Bacterial export proteins, family 3 J9319_08310 PF01311 Bacterial export proteins, family 1 J9319_08315 PF01312 FlhB HrpN YscU SpaS Family J9319_08320 PF00771 FHIPEP family J9319_08325 PF00448 SRP54-type protein, GTPase domain J9319_08330 PF10609 NUBPL iron-transfer P-loop NTPase J9319_08335 PF01339 CheB methylesterase J9319_08335 PF00072 Response regulator receiver domain J9319_08340 PF02895 Signal transducing histidine kinase, homodimeric domain J9319_08340 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase J9319_08340 PF01627 Hpt domain J9319_08340 PF07194 P2 response regulator binding domain J9319_08340 PF01584 CheW-like domain J9319_08345 PF01584 CheW-like domain J9319_08350 PF04509 CheC-like family J9319_08355 PF03975 CheD chemotactic sensory transduction J9319_08360 PF04542 Sigma-70 region 2 J9319_08360 PF04539 Sigma-70 region 3 J9319_08360 PF04545 Sigma-70, region 4 J9319_08370 PF00318 Ribosomal protein S2 J9319_08375 PF00889 Elongation factor TS J9319_08380 PF00696 Amino acid kinase family J9319_08385 PF01765 Ribosome recycling factor J9319_08390 PF01255 Putative undecaprenyl diphosphate synthase J9319_08400 PF02670 1-deoxy-D-xylulose 5-phosphate reductoisomerase J9319_08400 PF13288 DXP reductoisomerase C-terminal domain J9319_08400 PF08436 1-deoxy-D-xylulose 5-phosphate reductoisomerase C-terminal domain J9319_08405 PF17820 PDZ domain J9319_08405 PF02163 Peptidase family M50 J9319_08410 PF04073 Aminoacyl-tRNA editing domain J9319_08410 PF03129 Anticodon binding domain J9319_08410 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) J9319_08415 PF14480 DNA polymerase III polC-type N-terminus I J9319_08415 PF11490 DNA polymerase III polC-type N-terminus II J9319_08415 PF07733 Bacterial DNA polymerase III alpha NTPase domain J9319_08415 PF17657 Bacterial DNA polymerase III alpha subunit finger domain J9319_08415 PF14579 Helix-hairpin-helix motif J9319_08415 PF02811 PHP domain J9319_08415 PF00929 Exonuclease J9319_08420 PF00942 Cellulose binding domain J9319_08420 PF00759 Glycosyl hydrolase family 9 J9319_08425 PF02011 Glycosyl hydrolase family 48 J9319_08425 PF00942 Cellulose binding domain J9319_08425 PF00759 Glycosyl hydrolase family 9 J9319_08430 PF00331 Glycosyl hydrolase family 10 J9319_08430 PF12791 Anti-sigma factor N-terminus J9319_08440 PF02576 RimP N-terminal domain J9319_08440 PF17384 RimP C-terminal SH3 domain J9319_08445 PF13184 NusA-like KH domain J9319_08445 PF08529 NusA N-terminal domain J9319_08445 PF00575 S1 RNA binding domain J9319_08450 PF04296 Protein of unknown function (DUF448) J9319_08455 PF01248 Ribosomal protein L7Ae/L30e/S12e/Gadd45 family J9319_08460 PF11987 Translation-initiation factor 2 J9319_08460 PF04760 Translation initiation factor IF-2, N-terminal region J9319_08460 PF00009 Elongation factor Tu GTP binding domain J9319_08465 PF04456 Protein of unknown function (DUF503) J9319_08470 PF02033 Ribosome-binding factor A J9319_08475 PF01509 TruB family pseudouridylate synthase (N terminal domain) J9319_08475 PF16198 tRNA pseudouridylate synthase B C-terminal domain J9319_08480 PF06574 FAD synthetase J9319_08480 PF01687 Riboflavin kinase J9319_08485 PF00312 Ribosomal protein S15 J9319_08490 PF00013 KH domain J9319_08490 PF03726 Polyribonucleotide nucleotidyltransferase, RNA binding domain J9319_08490 PF01138 3' exoribonuclease family, domain 1 J9319_08490 PF03725 3' exoribonuclease family, domain 2 J9319_08490 PF00575 S1 RNA binding domain J9319_08495 PF01522 Polysaccharide deacetylase J9319_08500 PF00675 Insulinase (Peptidase family M16) J9319_08500 PF05193 Peptidase M16 inactive domain J9319_08510 PF05239 PRC-barrel domain J9319_08515 PF01262 Alanine dehydrogenase/PNT, C-terminal domain J9319_08515 PF16924 Dipicolinate synthase subunit A N-terminal domain J9319_08520 PF02441 Flavoprotein J9319_08525 PF01118 Semialdehyde dehydrogenase, NAD binding domain J9319_08525 PF02774 Semialdehyde dehydrogenase, dimerisation domain J9319_08530 PF00696 Amino acid kinase family J9319_08530 PF13840 ACT domain J9319_08535 PF00701 Dihydrodipicolinate synthetase family J9319_08540 PF00753 Metallo-beta-lactamase superfamily J9319_08540 PF07521 Zn-dependent metallo-hydrolase RNA specificity domain J9319_08540 PF17770 Ribonuclease J C-terminal domain J9319_08545 PF00574 Clp protease J9319_08550 PF14035 YlzJ-like protein J9319_08555 PF17854 FtsK alpha domain J9319_08555 PF01580 FtsK/SpoIIIE family J9319_08555 PF09397 Ftsk gamma domain J9319_08560 PF00392 Bacterial regulatory proteins, gntR family J9319_08560 PF07702 UTRA domain J9319_08565 PF07690 Major Facilitator Superfamily J9319_08570 PF03176 MMPL family J9319_08575 PF05193 Peptidase M16 inactive domain J9319_08580 PF00675 Insulinase (Peptidase family M16) J9319_08580 PF05193 Peptidase M16 inactive domain J9319_08590 PF03176 MMPL family J9319_08600 PF11588 Protein of unknown function (DUF3243) J9319_08605 PF11868 Protein of unknown function (DUF3388) J9319_08610 PF13464 Domain of unknown function (DUF4115) J9319_08615 PF01066 CDP-alcohol phosphatidyltransferase J9319_08620 PF18146 Damage-inducible protein CinA KH domain J9319_08620 PF00994 Probable molybdopterin binding domain J9319_08620 PF02464 Competence-damaged protein J9319_08625 PF00154 recA bacterial DNA recombination protein J9319_08630 PF01966 HD domain J9319_08630 PF00013 KH domain J9319_08630 PF12072 Domain of unknown function (DUF3552) J9319_08635 PF13277 YmdB-like protein J9319_08640 PF04232 Stage V sporulation protein S (SpoVS) J9319_08645 PF00873 AcrB/AcrD/AcrF family J9319_08650 PF00107 Zinc-binding dehydrogenase J9319_08650 PF08240 Alcohol dehydrogenase GroES-like domain J9319_08655 PF00155 Aminotransferase class I and II J9319_08665 PF00919 Uncharacterized protein family UPF0004 J9319_08665 PF01938 TRAM domain J9319_08665 PF04055 Radical SAM superfamily J9319_08670 PF06133 Control of competence regulator ComK, YlbF/YmcA J9319_08675 PF10628 Outer spore coat protein E (CotE) J9319_08680 PF01624 MutS domain I J9319_08680 PF05190 MutS family domain IV J9319_08680 PF00488 MutS domain V J9319_08680 PF05192 MutS domain III J9319_08680 PF05188 MutS domain II J9319_08685 PF01119 DNA mismatch repair protein, C-terminal domain J9319_08685 PF08676 MutL C terminal dimerisation domain J9319_08695 PF17735 Biofilm surface layer A J9319_08705 PF02559 CarD-like/TRCF domain J9319_08710 PF05908 Poly-gamma-glutamate hydrolase J9319_08715 PF18801 response regulator aspartate phosphatase H, N terminal J9319_08720 PF00082 Subtilase family J9319_08725 PF05908 Poly-gamma-glutamate hydrolase J9319_08730 PF02566 OsmC-like protein J9319_08735 PF00893 Small Multidrug Resistance protein J9319_08740 PF00893 Small Multidrug Resistance protein J9319_08755 PF12788 YmaF family J9319_08765 PF17209 Hfq protein J9319_08780 PF07972 NrdI Flavodoxin like J9319_08785 PF02867 Ribonucleotide reductase, barrel domain J9319_08785 PF00317 Ribonucleotide reductase, all-alpha domain J9319_08785 PF08343 Ribonucleotide reductase N-terminal J9319_08790 PF00268 Ribonucleotide reductase, small chain J9319_08800 PF01520 N-acetylmuramoyl-L-alanine amidase J9319_08800 PF05036 Sporulation related domain J9319_08805 PF00004 ATPase family associated with various cellular activities (AAA) J9319_08805 PF17866 AAA lid domain J9319_08810 PF13167 GTP-binding GTPase N-terminal J9319_08810 PF01926 50S ribosome-binding GTPase J9319_08810 PF16360 GTP-binding GTPase Middle Region J9319_08815 PF06838 Methionine gamma-lyase J9319_08820 PF13411 MerR HTH family regulatory protein J9319_08825 PF00120 Glutamine synthetase, catalytic domain J9319_08825 PF03951 Glutamine synthetase, beta-Grasp domain J9319_08845 PF00293 NUDIX domain J9319_08850 PF18801 response regulator aspartate phosphatase H, N terminal J9319_08870 PF04740 LXG domain of WXG superfamily J9319_08875 PF04634 Protein of unknown function, DUF600 J9319_08890 PF01569 PAP2 superfamily J9319_08895 PF08818 Domain of unknown function (DU1801) J9319_08915 PF18801 response regulator aspartate phosphatase H, N terminal J9319_08925 PF06912 Protein of unknown function (DUF1275) J9319_08930 PF01068 ATP dependent DNA ligase domain J9319_08935 PF02735 Ku70/Ku80 beta-barrel domain J9319_08940 PF09954 Uncharacterized protein conserved in bacteria (DUF2188) J9319_08950 PF02082 Transcriptional regulator J9319_08955 PF05368 NmrA-like family J9319_08965 PF02754 Cysteine-rich domain J9319_08970 PF02589 LUD domain J9319_08970 PF11870 Domain of unknown function (DUF3390) J9319_08970 PF13183 4Fe-4S dicluster domain J9319_08975 PF02589 LUD domain J9319_08995 PF04239 Protein of unknown function (DUF421) J9319_09000 PF00440 Bacterial regulatory proteins, tetR family J9319_09000 PF16295 Tetracyclin repressor-like, C-terminal domain J9319_09005 PF00667 FAD binding domain J9319_09005 PF00258 Flavodoxin J9319_09005 PF00175 Oxidoreductase NAD-binding domain J9319_09005 PF00067 Cytochrome P450 J9319_09010 PF00089 Trypsin J9319_09020 PF14040 Deoxyribonuclease NucA/NucB J9319_09025 PF01740 STAS domain J9319_09030 PF16800 IseA DL-endopeptidase inhibitor J9319_09040 PF01726 LexA DNA binding domain J9319_09040 PF00717 Peptidase S24-like J9319_09045 PF01476 LysM domain J9319_09050 PF00239 Resolvase, N terminal domain J9319_09055 PF05979 Bacterial protein of unknown function (DUF896) J9319_09060 PF02780 Transketolase, C-terminal domain J9319_09060 PF02779 Transketolase, pyrimidine binding domain J9319_09060 PF00456 Transketolase, thiamine diphosphate binding domain J9319_09065 PF10747 Sporulation inhibitor of replication protein SirA J9319_09070 PF03672 Uncharacterised protein family (UPF0154) J9319_09075 PF09388 Spo0E like sporulation regulatory protein J9319_09080 PF02683 Cytochrome C biogenesis protein transmembrane region J9319_09085 PF07301 Protein of unknown function (DUF1453) J9319_09090 PF11084 Protein of unknown function (DUF2621) J9319_09100 PF08179 Small acid-soluble spore protein P family J9319_09110 PF00330 Aconitase family (aconitate hydratase) J9319_09110 PF00694 Aconitase C-terminal domain J9319_09115 PF00578 AhpC/TSA family J9319_09120 PF13040 Fur-regulated basic protein B J9319_09125 PF08177 Small acid-soluble spore protein N family J9319_09135 PF03061 Thioesterase superfamily J9319_09145 PF01521 Iron-sulphur cluster biosynthesis J9319_09150 PF02660 Glycerol-3-phosphate acyltransferase J9319_09155 PF13380 CoA binding domain J9319_09160 PF00204 DNA gyrase B J9319_09160 PF00986 DNA gyrase B subunit, carboxyl terminus J9319_09160 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase J9319_09160 PF01751 Toprim domain J9319_09165 PF00521 DNA gyrase/topoisomerase IV, subunit A J9319_09165 PF03989 DNA gyrase C-terminal domain, beta-propeller J9319_09175 PF07690 Major Facilitator Superfamily J9319_09180 PF00180 Isocitrate/isopropylmalate dehydrogenase J9319_09190 PF01451 Low molecular weight phosphotyrosine protein phosphatase J9319_09195 PF02040 Arsenical pump membrane protein J9319_09200 PF01022 Bacterial regulatory protein, arsR family J9319_09215 PF01323 DSBA-like thioredoxin domain J9319_09220 PF02525 Flavodoxin-like fold J9319_09230 PF00440 Bacterial regulatory proteins, tetR family J9319_09235 PF02525 Flavodoxin-like fold J9319_09240 PF01638 HxlR-like helix-turn-helix J9319_09245 PF00291 Pyridoxal-phosphate dependent enzyme J9319_09250 PF01042 Endoribonuclease L-PSP J9319_09265 PF01494 FAD binding domain J9319_09280 PF12802 MarR family J9319_09295 PF08803 Putative mono-oxygenase ydhR J9319_09305 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region J9319_09310 PF00934 PE family J9319_09310 PF07859 alpha/beta hydrolase fold J9319_09315 PF13411 MerR HTH family regulatory protein J9319_09320 PF00232 Glycosyl hydrolase family 1 J9319_09325 PF00367 phosphotransferase system, EIIB J9319_09325 PF02378 Phosphotransferase system, EIIC J9319_09325 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 J9319_09330 PF03123 CAT RNA binding domain J9319_09330 PF00874 PRD domain J9319_09340 PF00512 His Kinase A (phospho-acceptor) domain J9319_09340 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase J9319_09345 PF00486 Transcriptional regulatory protein, C terminal J9319_09345 PF00072 Response regulator receiver domain J9319_09350 PF17189 Glycosyl hydrolase family 30 beta sandwich domain J9319_09350 PF02055 Glycosyl hydrolase family 30 TIM-barrel domain J9319_09355 PF03422 Carbohydrate binding module (family 6) J9319_09355 PF04616 Glycosyl hydrolases family 43 J9319_09360 PF00171 Aldehyde dehydrogenase family J9319_09365 PF02056 Family 4 glycosyl hydrolase J9319_09365 PF11975 Family 4 glycosyl hydrolase C-terminal domain J9319_09370 PF00528 Binding-protein-dependent transport system inner membrane component J9319_09375 PF00528 Binding-protein-dependent transport system inner membrane component J9319_09380 PF01547 Bacterial extracellular solute-binding protein J9319_09385 PF00356 Bacterial regulatory proteins, lacI family J9319_09390 PF00834 Ribulose-phosphate 3 epimerase family J9319_09405 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 J9319_09415 PF00583 Acetyltransferase (GNAT) family J9319_09420 PF00392 Bacterial regulatory proteins, gntR family J9319_09420 PF00155 Aminotransferase class I and II J9319_09425 PF18593 CdiI immunity protein J9319_09435 PF14410 HNH/ENDO VII superfamily nuclease with conserved GHE residues J9319_09435 PF14449 Pre-toxin TG J9319_09435 PF04740 LXG domain of WXG superfamily J9319_09445 PF01047 MarR family J9319_09450 PF07690 Major Facilitator Superfamily J9319_09455 PF01116 Fructose-bisphosphate aldolase class-II J9319_09460 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit J9319_09460 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 J9319_09460 PF02378 Phosphotransferase system, EIIC J9319_09465 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 J9319_09465 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit J9319_09470 PF00294 pfkB family carbohydrate kinase J9319_09475 PF01418 Helix-turn-helix domain, rpiR family J9319_09475 PF01380 SIS domain J9319_09480 PF13091 PLD-like domain J9319_09500 PF00171 Aldehyde dehydrogenase family J9319_09505 PF00667 FAD binding domain J9319_09505 PF00258 Flavodoxin J9319_09505 PF00175 Oxidoreductase NAD-binding domain J9319_09510 PF01077 Nitrite and sulphite reductase 4Fe-4S domain J9319_09510 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain J9319_09515 PF13193 AMP-binding enzyme C-terminal domain J9319_09515 PF16177 Acetyl-coenzyme A synthetase N-terminus J9319_09515 PF00501 AMP-binding enzyme J9319_09520 PF01039 Carboxyl transferase domain J9319_09525 PF00378 Enoyl-CoA hydratase/isomerase J9319_09530 PF00682 HMGL-like J9319_09535 PF00364 Biotin-requiring enzyme J9319_09540 PF02785 Biotin carboxylase C-terminal domain J9319_09540 PF00289 Biotin carboxylase, N-terminal domain J9319_09540 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain J9319_09545 PF00501 AMP-binding enzyme J9319_09545 PF13193 AMP-binding enzyme C-terminal domain J9319_09550 PF02771 Acyl-CoA dehydrogenase, N-terminal domain J9319_09550 PF00441 Acyl-CoA dehydrogenase, C-terminal domain J9319_09550 PF02770 Acyl-CoA dehydrogenase, middle domain J9319_09555 PF02638 Glycosyl hydrolase-like 10 J9319_09560 PF13350 Tyrosine phosphatase family J9319_09565 PF08220 DeoR-like helix-turn-helix domain J9319_09565 PF00455 DeoR C terminal sensor domain J9319_09570 PF14552 Tautomerase enzyme J9319_09580 PF13556 PucR C-terminal helix-turn-helix domain J9319_09580 PF17853 GGDEF-like domain J9319_09580 PF05651 Putative sugar diacid recognition J9319_09585 PF02913 FAD linked oxidases, C-terminal domain J9319_09585 PF01565 FAD binding domain J9319_09590 PF13183 4Fe-4S dicluster domain J9319_09590 PF02754 Cysteine-rich domain J9319_09595 PF03323 Bacillus/Clostridium GerA spore germination protein J9319_09600 PF03845 Spore germination protein J9319_09610 PF12728 Helix-turn-helix domain J9319_09615 PF04138 GtrA-like protein J9319_09620 PF00483 Nucleotidyl transferase J9319_09625 PF09335 SNARE associated Golgi protein J9319_09630 PF02602 Uroporphyrinogen-III synthase HemD J9319_09640 PF00296 Luciferase-like monooxygenase J9319_09655 PF01554 MatE J9319_09660 PF02113 D-Ala-D-Ala carboxypeptidase 3 (S13) family J9319_09665 PF01095 Pectinesterase J9319_09670 PF04239 Protein of unknown function (DUF421) J9319_09675 PF00355 Rieske [2Fe-2S] domain J9319_09680 PF04324 BFD-like [2Fe-2S] binding domain J9319_09680 PF01077 Nitrite and sulphite reductase 4Fe-4S domain J9319_09680 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain J9319_09680 PF07992 Pyridine nucleotide-disulphide oxidoreductase J9319_09680 PF18267 Rubredoxin NAD+ reductase C-terminal domain J9319_09685 PF01568 Molydopterin dinucleotide binding domain J9319_09685 PF04879 Molybdopterin oxidoreductase Fe4S4 domain J9319_09685 PF00384 Molybdopterin oxidoreductase J9319_09690 PF18267 Rubredoxin NAD+ reductase C-terminal domain J9319_09690 PF04324 BFD-like [2Fe-2S] binding domain J9319_09690 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain J9319_09690 PF07992 Pyridine nucleotide-disulphide oxidoreductase J9319_09695 PF07690 Major Facilitator Superfamily J9319_09700 PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster J9319_09700 PF07992 Pyridine nucleotide-disulphide oxidoreductase J9319_09705 PF00310 Glutamine amidotransferases class-II J9319_09705 PF04898 Glutamate synthase central domain J9319_09705 PF01493 GXGXG motif J9319_09705 PF01645 Conserved region in glutamate synthase J9319_09710 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family J9319_09710 PF03466 LysR substrate binding domain J9319_09715 PF00664 ABC transporter transmembrane region J9319_09715 PF00005 ABC transporter J9319_09720 PF00664 ABC transporter transmembrane region J9319_09720 PF00005 ABC transporter J9319_09725 PF13411 MerR HTH family regulatory protein J9319_09725 PF06445 GyrI-like small molecule binding domain J9319_09730 PF00583 Acetyltransferase (GNAT) family J9319_09735 PF00171 Aldehyde dehydrogenase family J9319_09740 PF00696 Amino acid kinase family J9319_09740 PF01472 PUA domain J9319_09745 PF03807 NADP oxidoreductase coenzyme F420-dependent J9319_09745 PF14748 Pyrroline-5-carboxylate reductase dimerisation J9319_09750 PF00067 Cytochrome P450 J9319_09755 PF04879 Molybdopterin oxidoreductase Fe4S4 domain J9319_09755 PF00384 Molybdopterin oxidoreductase J9319_09755 PF01568 Molydopterin dinucleotide binding domain J9319_09760 PF00457 Glycosyl hydrolases family 11 J9319_09765 PF02782 FGGY family of carbohydrate kinases, C-terminal domain J9319_09765 PF00370 FGGY family of carbohydrate kinases, N-terminal domain J9319_09770 PF01261 Xylose isomerase-like TIM barrel J9319_09775 PF00480 ROK family J9319_09780 PF17851 Beta xylosidase C-terminal Concanavalin A-like domain J9319_09780 PF04616 Glycosyl hydrolases family 43 J9319_09790 PF01588 Putative tRNA binding domain J9319_09800 PF14158 YndJ-like protein J9319_09805 PF13761 Domain of unknown function (DUF4166) J9319_09815 PF13305 Tetracyclin repressor-like, C-terminal domain J9319_09815 PF00440 Bacterial regulatory proteins, tetR family J9319_09820 PF00753 Metallo-beta-lactamase superfamily J9319_09825 PF06445 GyrI-like small molecule binding domain J9319_09830 PF08279 HTH domain J9319_09830 PF13280 WYL domain J9319_09840 PF01022 Bacterial regulatory protein, arsR family J9319_09845 PF00324 Amino acid permease J9319_09860 PF03972 MmgE/PrpD family J9319_09865 PF00285 Citrate synthase, C-terminal domain J9319_09870 PF04238 Protein of unknown function (DUF420) J9319_09880 PF06725 3D domain J9319_09880 PF01476 LysM domain J9319_09885 PF16124 RecQ zinc-binding J9319_09885 PF09382 RQC domain J9319_09885 PF00271 Helicase conserved C-terminal domain J9319_09885 PF00270 DEAD/DEAH box helicase J9319_09885 PF00570 HRDC domain J9319_09895 PF01258 Prokaryotic dksA/traR C4-type zinc finger J9319_09905 PF08000 Bacterial PH domain J9319_09920 PF00171 Aldehyde dehydrogenase family J9319_09925 PF13243 Squalene-hopene cyclase C-terminal domain J9319_09925 PF13249 Squalene-hopene cyclase N-terminal domain J9319_09930 PF02777 Iron/manganese superoxide dismutases, C-terminal domain J9319_09930 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain J9319_09935 PF01758 Sodium Bile acid symporter family J9319_09940 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) J9319_09940 PF02817 e3 binding domain J9319_09940 PF00364 Biotin-requiring enzyme J9319_09945 PF16870 2-oxoglutarate dehydrogenase C-terminal J9319_09945 PF00676 Dehydrogenase E1 component J9319_09945 PF16078 2-oxoglutarate dehydrogenase N-terminus J9319_09945 PF02779 Transketolase, pyrimidine binding domain J9319_09950 PF00092 von Willebrand factor type A domain J9319_09955 PF07728 AAA domain (dynein-related subfamily) J9319_09960 PF13627 Prokaryotic lipoprotein-attachment site J9319_09960 PF00080 Copper/zinc superoxide dismutase (SODC) J9319_09965 PF01476 LysM domain J9319_09965 PF00877 NlpC/P60 family J9319_09970 PF10372 Bacterial membrane-spanning protein N-terminus J9319_09970 PF02457 DisA bacterial checkpoint controller nucleotide-binding J9319_09975 PF01554 MatE J9319_09980 PF02585 GlcNAc-PI de-N-acetylase J9319_09985 PF08830 Protein of unknown function (DUF1806) J9319_09995 PF00892 EamA-like transporter family J9319_10010 PF01638 HxlR-like helix-turn-helix J9319_10015 PF00881 Nitroreductase family J9319_10020 PF11755 Protein of unknown function (DUF3311) J9319_10025 PF00474 Sodium:solute symporter family J9319_10030 PF03572 Peptidase family S41 J9319_10030 PF01471 Putative peptidoglycan binding domain J9319_10030 PF17820 PDZ domain J9319_10035 PF08241 Methyltransferase domain J9319_10045 PF02557 D-alanyl-D-alanine carboxypeptidase J9319_10050 PF01048 Phosphorylase superfamily J9319_10055 PF14191 YodL-like J9319_10060 PF01569 PAP2 superfamily J9319_10065 PF14162 YozD-like protein J9319_10080 PF06855 YozE SAM-like fold J9319_10085 PF14122 YokU-like protein, putative antitoxin J9319_10090 PF12544 Lysine-2,3-aminomutase J9319_10095 PF00158 Sigma-54 interaction domain J9319_10095 PF02954 Bacterial regulatory protein, Fis family J9319_10095 PF13426 PAS domain J9319_10100 PF00535 Glycosyl transferase family 2 J9319_10115 PF12996 DUF based on E. rectale Gene description (DUF3880) J9319_10125 PF02719 Polysaccharide biosynthesis protein J9319_10130 PF01641 SelR domain J9319_10135 PF01625 Peptide methionine sulfoxide reductase J9319_10140 PF01047 MarR family J9319_10155 PF17431 Uncharacterized YmpT-like J9319_10160 PF09911 Uncharacterized protein conserved in bacteria (DUF2140) J9319_10165 PF13472 GDSL-like Lipase/Acylhydrolase family J9319_10170 PF02630 SCO1/SenC J9319_10175 PF02645 Uncharacterised protein, DegV family COG1307 J9319_10180 PF10751 Protein of unknown function (DUF2535) J9319_10185 PF00291 Pyridoxal-phosphate dependent enzyme J9319_10185 PF00585 C-terminal regulatory domain of Threonine dehydratase J9319_10190 PF00158 Sigma-54 interaction domain J9319_10190 PF08461 Ribonuclease R winged-helix domain J9319_10195 PF03006 Haemolysin-III related J9319_10205 PF00186 Dihydrofolate reductase J9319_10210 PF00303 Thymidylate synthase J9319_10215 PF04608 Phosphatidylglycerophosphatase A J9319_10220 PF14005 YpjP-like protein J9319_10225 PF04445 Putative SAM-dependent methyltransferase J9319_10230 PF06491 Disulphide isomerase J9319_10235 PF00920 Dehydratase family J9319_10240 PF13769 Virulence factor J9319_10240 PF08712 Scaffold protein Nfu/NifU N terminal J9319_10245 PF01966 HD domain J9319_10250 PF00255 Glutathione peroxidase J9319_10255 PF01268 Formate--tetrahydrofolate ligase J9319_10260 PF04204 Homoserine O-succinyltransferase J9319_10265 PF00534 Glycosyl transferases group 1 J9319_10265 PF06925 Monogalactosyldiacylglycerol (MGDG) synthase J9319_10275 PF00313 'Cold-shock' DNA-binding domain J9319_10285 PF10782 Zinc-finger J9319_10290 PF13456 Reverse transcriptase-like J9319_10295 PF02592 Putative vitamin uptake transporter J9319_10300 PF13456 Reverse transcriptase-like J9319_10310 PF01367 5'-3' exonuclease, C-terminal SAM fold J9319_10310 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain J9319_10320 PF00350 Dynamin family J9319_10330 PF04140 Isoprenylcysteine carboxyl methyltransferase (ICMT) family J9319_10335 PF02797 Chalcone and stilbene synthases, C-terminal domain J9319_10335 PF00195 Chalcone and stilbene synthases, N-terminal domain J9319_10340 PF01522 Polysaccharide deacetylase J9319_10345 PF00860 Permease family J9319_10355 PF02074 Carboxypeptidase Taq (M32) metallopeptidase J9319_10360 PF13307 Helicase C-terminal domain J9319_10370 PF01170 Putative RNA methylase family UPF0020 J9319_10370 PF02926 THUMP domain J9319_10380 PF05103 DivIVA protein J9319_10385 PF06908 YspA SLOG family J9319_10390 PF11122 Inner spore coat protein D J9319_10395 PF13482 RNase_H superfamily J9319_10400 PF00270 DEAD/DEAH box helicase J9319_10400 PF09369 Domain of unknown function (DUF1998) J9319_10400 PF00271 Helicase conserved C-terminal domain J9319_10405 PF00724 NADH:flavin oxidoreductase / NADH oxidase family J9319_10410 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 J9319_10420 PF14179 YppG-like protein J9319_10440 PF10720 Protein of unknown function (DUF2515) J9319_10445 PF03838 Recombination protein U J9319_10450 PF00912 Transglycosylase J9319_10450 PF00905 Penicillin binding protein transpeptidase domain J9319_10460 PF10576 Iron-sulfur binding domain of endonuclease III J9319_10460 PF00633 Helix-hairpin-helix motif J9319_10460 PF00730 HhH-GPD superfamily base excision DNA repair protein J9319_10465 PF07261 Replication initiation and membrane attachment J9319_10470 PF00152 tRNA synthetases class II (D, K and N) J9319_10470 PF01336 OB-fold nucleic acid binding domain J9319_10475 PF17881 Domain of unknown function (DUF5590) J9319_10475 PF03413 Peptidase propeptide and YPEB domain J9319_10480 PF14084 Protein of unknown function (DUF4264) J9319_10485 PF13307 Helicase C-terminal domain J9319_10485 PF00929 Exonuclease J9319_10485 PF04851 Type III restriction enzyme, res subunit J9319_10490 PF02261 Aspartate decarboxylase J9319_10495 PF02569 Pantoate-beta-alanine ligase J9319_10500 PF02548 Ketopantoate hydroxymethyltransferase J9319_10505 PF02237 Biotin protein ligase C terminal domain J9319_10505 PF03099 Biotin/lipoate A/B protein ligase family J9319_10505 PF08279 HTH domain J9319_10510 PF01743 Poly A polymerase head domain J9319_10510 PF12627 Probable RNA and SrmB- binding site of polymerase A J9319_10510 PF13735 tRNA nucleotidyltransferase domain 2 putative J9319_10515 PF13439 Glycosyltransferase Family 4 J9319_10515 PF00534 Glycosyl transferases group 1 J9319_10520 PF02585 GlcNAc-PI de-N-acetylase J9319_10525 PF02142 MGS-like domain J9319_10530 PF01113 Dihydrodipicolinate reductase, N-terminus J9319_10530 PF05173 Dihydrodipicolinate reductase, C-terminus J9319_10535 PF03819 MazG nucleotide pyrophosphohydrolase domain J9319_10540 PF10035 Uncharacterized protein conserved in bacteria (DUF2179) J9319_10540 PF02588 Uncharacterised 5xTM membrane BCR, YitT family COG1284 J9319_10545 PF09577 Sporulation protein YpjB (SpoYpjB) J9319_10550 PF07187 Protein of unknown function (DUF1405) J9319_10555 PF00032 Cytochrome b(C-terminal)/b6/petD J9319_10555 PF13442 Cytochrome C oxidase, cbb3-type, subunit III J9319_10560 PF00033 Cytochrome b/b6/petB J9319_10565 PF00355 Rieske [2Fe-2S] domain J9319_10570 PF10673 Protein of unknown function (DUF2487) J9319_10575 PF08864 UPF0302 domain J9319_10575 PF08858 IDEAL domain J9319_10585 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) J9319_10590 PF02153 Prephenate dehydrogenase J9319_10590 PF01842 ACT domain J9319_10595 PF00155 Aminotransferase class I and II J9319_10600 PF00290 Tryptophan synthase alpha chain J9319_10605 PF00291 Pyridoxal-phosphate dependent enzyme J9319_10610 PF00697 N-(5'phosphoribosyl)anthranilate (PRA) isomerase J9319_10615 PF00218 Indole-3-glycerol phosphate synthase J9319_10620 PF00591 Glycosyl transferase family, a/b domain J9319_10620 PF02885 Glycosyl transferase family, helical bundle domain J9319_10625 PF04715 Anthranilate synthase component I, N terminal region J9319_10625 PF00425 chorismate binding enzyme J9319_10630 PF07736 Chorismate mutase type I J9319_10635 PF01761 3-dehydroquinate synthase J9319_10640 PF01264 Chorismate synthase J9319_10645 PF03705 CheR methyltransferase, all-alpha domain J9319_10645 PF01739 CheR methyltransferase, SAM binding domain J9319_10650 PF00334 Nucleoside diphosphate kinase J9319_10655 PF00348 Polyprenyl synthetase J9319_10660 PF01209 ubiE/COQ5 methyltransferase family J9319_10665 PF07307 Heptaprenyl diphosphate synthase (HEPPP synthase) subunit 1 J9319_10670 PF02081 Tryptophan RNA-binding attenuator protein J9319_10675 PF01227 GTP cyclohydrolase I J9319_10680 PF00216 Bacterial DNA-binding protein J9319_10685 PF09547 Stage IV sporulation protein A (spore_IV_A) J9319_10695 PF10966 Protein of unknown function (DUF2768) J9319_10700 PF07479 NAD-dependent glycerol-3-phosphate dehydrogenase C-terminus J9319_10700 PF01210 NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus J9319_10705 PF01926 50S ribosome-binding GTPase J9319_10705 PF14714 KH-domain-like of EngA bacterial GTPase enzymes, C-terminal J9319_10715 PF14045 YIEGIA protein J9319_10725 PF14140 YpzI-like protein J9319_10730 PF01070 FMN-dependent dehydrogenase J9319_10735 PF00575 S1 RNA binding domain J9319_10740 PF02224 Cytidylate kinase J9319_10745 PF17313 Family of unknown function (DUF5359) J9319_10750 PF07238 PilZ domain J9319_10750 PF12945 Flagellar protein YcgR J9319_10755 PF03413 Peptidase propeptide and YPEB domain J9319_10755 PF14620 YpeB sporulation J9319_10760 PF07486 Cell Wall Hydrolase J9319_10760 PF01471 Putative peptidoglycan binding domain J9319_10765 PF13367 PrsW family intramembrane metalloprotease J9319_10775 PF02812 Glu/Leu/Phe/Val dehydrogenase, dimerisation domain J9319_10775 PF00208 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase J9319_10780 PF05389 Negative regulator of genetic competence (MecA) J9319_10785 PF00149 Calcineurin-like phosphoesterase J9319_10790 PF10864 Protein of unknown function (DUF2663) J9319_10795 PF01476 LysM domain J9319_10800 PF02517 CPBP intramembrane metalloprotease J9319_10805 PF00270 DEAD/DEAH box helicase J9319_10805 PF00271 Helicase conserved C-terminal domain J9319_10810 PF14493 Helix-turn-helix domain J9319_10820 PF12822 ECF transporter, substrate-specific component J9319_10825 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain J9319_10825 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain J9319_10825 PF01842 ACT domain J9319_10830 PF01551 Peptidase family M23 J9319_10830 PF01476 LysM domain J9319_10840 PF04542 Sigma-70 region 2 J9319_10840 PF08281 Sigma-70, region 4 J9319_10845 PF00672 HAMP domain J9319_10845 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase J9319_10845 PF18698 Histidine kinase sensor domain J9319_10845 PF00512 His Kinase A (phospho-acceptor) domain J9319_10845 PF00989 PAS fold J9319_10850 PF00072 Response regulator receiver domain J9319_10850 PF00486 Transcriptional regulatory protein, C terminal J9319_10855 PF01578 Cytochrome C assembly protein J9319_10860 PF05140 ResB-like family J9319_10865 PF00578 AhpC/TSA family J9319_10870 PF00849 RNA pseudouridylate synthase J9319_10870 PF01479 S4 domain J9319_10875 PF07670 Nucleoside recognition J9319_10880 PF07670 Nucleoside recognition J9319_10885 PF07943 Penicillin-binding protein 5, C-terminal domain J9319_10885 PF00768 D-alanyl-D-alanine carboxypeptidase J9319_10890 PF13047 Protein of unknown function (DUF3907) J9319_10895 PF04079 Segregation and condensation complex subunit ScpB J9319_10900 PF02616 Segregation and condensation protein ScpA J9319_10910 PF03745 Domain of unknown function (DUF309) J9319_10915 PF00583 Acetyltransferase (GNAT) family J9319_10920 PF00885 6,7-dimethyl-8-ribityllumazine synthase J9319_10925 PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase J9319_10925 PF00925 GTP cyclohydrolase II J9319_10930 PF00677 Lumazine binding domain J9319_10950 PF07690 Major Facilitator Superfamily J9319_10955 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD J9319_10960 PF06207 Protein of unknown function (DUF1002) J9319_10965 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain J9319_10965 PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain J9319_10970 PF03323 Bacillus/Clostridium GerA spore germination protein J9319_10975 PF14097 Stage V sporulation protein AE1 J9319_10980 PF03862 SpoVAC/SpoVAEB sporulation membrane protein J9319_10985 PF07451 Stage V sporulation protein AD (SpoVAD) J9319_10990 PF03862 SpoVAC/SpoVAEB sporulation membrane protein J9319_10995 PF13782 Stage V sporulation protein AB J9319_11000 PF12164 Stage V sporulation protein AA J9319_11005 PF04542 Sigma-70 region 2 J9319_11005 PF04539 Sigma-70 region 3 J9319_11005 PF04545 Sigma-70, region 4 J9319_11010 PF13581 Histidine kinase-like ATPase domain J9319_11015 PF01740 STAS domain J9319_11020 PF00768 D-alanyl-D-alanine carboxypeptidase J9319_11020 PF07943 Penicillin-binding protein 5, C-terminal domain J9319_11025 PF01048 Phosphorylase superfamily J9319_11030 PF01676 Metalloenzyme superfamily J9319_11035 PF02899 Phage integrase, N-terminal SAM-like domain J9319_11035 PF00589 Phage integrase family J9319_11040 PF14004 Protein of unknown function (DUF4227) J9319_11045 PF01475 Ferric uptake regulator family J9319_11050 PF01944 Stage II sporulation protein M J9319_11055 PF05922 Peptidase inhibitor I9 J9319_11055 PF00082 Subtilase family J9319_11065 PF13673 Acetyltransferase (GNAT) domain J9319_11075 PF00293 NUDIX domain J9319_11080 PF00248 Aldo/keto reductase family J9319_11095 PF12146 Serine aminopeptidase, S33 J9319_11100 PF18801 response regulator aspartate phosphatase H, N terminal J9319_11105 PF10827 Protein of unknown function (DUF2552) J9319_11110 PF01521 Iron-sulphur cluster biosynthesis J9319_11115 PF03330 Lytic transglycolase J9319_11120 PF13673 Acetyltransferase (GNAT) domain J9319_11120 PF04229 GrpB protein J9319_11125 PF00583 Acetyltransferase (GNAT) family J9319_11130 PF10787 Uncharacterised protein from bacillus cereus group J9319_11135 PF00817 impB/mucB/samB family J9319_11135 PF11799 impB/mucB/samB family C-terminal domain J9319_11140 PF08863 YolD-like protein J9319_11145 PF07690 Major Facilitator Superfamily J9319_11150 PF00485 Phosphoribulokinase / Uridine kinase family J9319_11155 PF07992 Pyridine nucleotide-disulphide oxidoreductase J9319_11155 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain J9319_11165 PF00106 short chain dehydrogenase J9319_11170 PF00753 Metallo-beta-lactamase superfamily J9319_11175 PF03807 NADP oxidoreductase coenzyme F420-dependent J9319_11175 PF14748 Pyrroline-5-carboxylate reductase dimerisation J9319_11185 PF01546 Peptidase family M20/M25/M40 J9319_11190 PF00724 NADH:flavin oxidoreductase / NADH oxidase family J9319_11195 PF12146 Serine aminopeptidase, S33 J9319_11200 PF12897 Alanine-glyoxylate amino-transferase J9319_11205 PF12706 Beta-lactamase superfamily domain J9319_11210 PF02781 Glucose-6-phosphate dehydrogenase, C-terminal domain J9319_11210 PF00479 Glucose-6-phosphate dehydrogenase, NAD binding domain J9319_11215 PF07702 UTRA domain J9319_11215 PF00392 Bacterial regulatory proteins, gntR family J9319_11220 PF00232 Glycosyl hydrolase family 1 J9319_11225 PF02378 Phosphotransferase system, EIIC J9319_11230 PF02255 PTS system, Lactose/Cellobiose specific IIA subunit J9319_11235 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit J9319_11250 PF06800 Sugar transport protein J9319_11255 PF00393 6-phosphogluconate dehydrogenase, C-terminal domain J9319_11255 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase J9319_11260 PF00817 impB/mucB/samB family J9319_11260 PF11799 impB/mucB/samB family C-terminal domain J9319_11260 PF11798 IMS family HHH motif J9319_11270 PF02096 60Kd inner membrane protein J9319_11275 PF01584 CheW-like domain J9319_11280 PF07687 Peptidase dimerisation domain J9319_11280 PF01546 Peptidase family M20/M25/M40 J9319_11285 PF01039 Carboxyl transferase domain J9319_11300 PF03734 L,D-transpeptidase catalytic domain J9319_11305 PF06081 Aromatic acid exporter family member 1 J9319_11305 PF11728 Putative aromatic acid exporter C-terminal domain J9319_11310 PF00005 ABC transporter J9319_11315 PF00528 Binding-protein-dependent transport system inner membrane component J9319_11320 PF00497 Bacterial extracellular solute-binding proteins, family 3 J9319_11325 PF06491 Disulphide isomerase J9319_11330 PF00781 Diacylglycerol kinase catalytic domain J9319_11340 PF02817 e3 binding domain J9319_11340 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) J9319_11340 PF00364 Biotin-requiring enzyme J9319_11345 PF02780 Transketolase, C-terminal domain J9319_11345 PF02779 Transketolase, pyrimidine binding domain J9319_11350 PF00676 Dehydrogenase E1 component J9319_11355 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain J9319_11355 PF07992 Pyridine nucleotide-disulphide oxidoreductase J9319_11360 PF00871 Acetokinase family J9319_11365 PF00208 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase J9319_11365 PF02812 Glu/Leu/Phe/Val dehydrogenase, dimerisation domain J9319_11370 PF01515 Phosphate acetyl/butaryl transferase J9319_11375 PF02954 Bacterial regulatory protein, Fis family J9319_11375 PF00989 PAS fold J9319_11375 PF00158 Sigma-54 interaction domain J9319_11380 PF11118 Protein of unknown function (DUF2627) J9319_11385 PF03009 Glycerophosphoryl diester phosphodiesterase family J9319_11390 PF18801 response regulator aspartate phosphatase H, N terminal J9319_11395 PF00072 Response regulator receiver domain J9319_11395 PF08769 Sporulation initiation factor Spo0A C terminal J9319_11400 PF05580 SpoIVB peptidase S55 J9319_11400 PF17820 PDZ domain J9319_11405 PF13476 AAA domain J9319_11410 PF02863 Arginine repressor, C-terminal domain J9319_11410 PF01316 Arginine repressor, DNA binding domain J9319_11415 PF01728 FtsJ-like methyltransferase J9319_11415 PF01479 S4 domain J9319_11420 PF02779 Transketolase, pyrimidine binding domain J9319_11420 PF02780 Transketolase, C-terminal domain J9319_11420 PF13292 1-deoxy-D-xylulose-5-phosphate synthase J9319_11425 PF00348 Polyprenyl synthetase J9319_11430 PF02609 Exonuclease VII small subunit J9319_11435 PF02601 Exonuclease VII, large subunit J9319_11435 PF13742 OB-fold nucleic acid binding domain J9319_11440 PF00763 Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain J9319_11440 PF02882 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain J9319_11445 PF01029 NusB family J9319_11450 PF03780 Asp23 family, cell envelope-related function J9319_11455 PF00289 Biotin carboxylase, N-terminal domain J9319_11455 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain J9319_11455 PF02785 Biotin carboxylase C-terminal domain J9319_11460 PF00364 Biotin-requiring enzyme J9319_11465 PF12685 SpoIIIAH-like protein J9319_11475 PF09581 Stage III sporulation protein AF (Spore_III_AF) J9319_11480 PF09546 Stage III sporulation protein AE (spore_III_AE) J9319_11485 PF06686 Stage III sporulation protein AC/AD protein family J9319_11490 PF06686 Stage III sporulation protein AC/AD protein family J9319_11495 PF09548 Stage III sporulation protein AB (spore_III_AB) J9319_11505 PF10942 Protein of unknown function (DUF2619) J9319_11510 PF01132 Elongation factor P (EF-P) OB domain J9319_11510 PF08207 Elongation factor P (EF-P) KOW-like domain J9319_11510 PF09285 Elongation factor P, C-terminal J9319_11515 PF01321 Creatinase/Prolidase N-terminal domain J9319_11515 PF00557 Metallopeptidase family M24 J9319_11520 PF01220 Dehydroquinase class II J9319_11525 PF11085 Conserved membrane protein YqhR J9319_11530 PF07136 Protein of unknown function (DUF1385) J9319_11540 PF01734 Patatin-like phospholipase J9319_11545 PF02742 Iron dependent repressor, metal binding and dimerisation domain J9319_11545 PF01325 Iron dependent repressor, N-terminal DNA binding domain J9319_11550 PF03099 Biotin/lipoate A/B protein ligase family J9319_11555 PF00581 Rhodanese-like domain J9319_11560 PF02347 Glycine cleavage system P-protein J9319_11565 PF02347 Glycine cleavage system P-protein J9319_11570 PF01571 Aminomethyltransferase folate-binding domain J9319_11570 PF08669 Glycine cleavage T-protein C-terminal barrel domain J9319_11575 PF00271 Helicase conserved C-terminal domain J9319_11575 PF00176 SNF2 family N-terminal domain J9319_11580 PF11079 Bacterial protein YqhG of unknown function J9319_11590 PF01381 Helix-turn-helix J9319_11590 PF08671 Anti-repressor SinI J9319_11595 PF12389 Camelysin metallo-endopeptidase J9319_11610 PF13028 Protein of unknown function (DUF3889) J9319_11615 PF14038 YqzE-like protein J9319_11635 PF07963 Prokaryotic N-terminal methylation motif J9319_11640 PF07963 Prokaryotic N-terminal methylation motif J9319_11645 PF00482 Type II secretion system (T2SS), protein F J9319_11650 PF00437 Type II/IV secretion system protein J9319_11655 PF01740 STAS domain J9319_11655 PF14361 RsbT co-antagonist protein rsbRD N-terminal domain J9319_11665 PF03960 ArsC family J9319_11670 PF11117 Protein of unknown function (DUF2626) J9319_11675 PF00753 Metallo-beta-lactamase superfamily J9319_11680 PF10958 Protein of unknown function (DUF2759) J9319_11685 PF01910 Thiamine-binding protein J9319_11690 PF07690 Major Facilitator Superfamily J9319_11695 PF00246 Zinc carboxypeptidase J9319_11700 PF00884 Sulfatase J9319_11705 PF00480 ROK family J9319_11710 PF06014 Bacterial protein of unknown function (DUF910) J9319_11715 PF01694 Rhomboid family J9319_11730 PF01812 5-formyltetrahydrofolate cyclo-ligase family J9319_11735 PF00471 Ribosomal protein L33 J9319_11750 PF00005 ABC transporter J9319_11755 PF00005 ABC transporter J9319_11760 PF00528 Binding-protein-dependent transport system inner membrane component J9319_11765 PF00528 Binding-protein-dependent transport system inner membrane component J9319_11770 PF12849 PBP superfamily domain J9319_11775 PF03717 Penicillin-binding Protein dimerisation domain J9319_11775 PF00905 Penicillin binding protein transpeptidase domain J9319_11780 PF07690 Major Facilitator Superfamily J9319_11785 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain J9319_11785 PF02777 Iron/manganese superoxide dismutases, C-terminal domain J9319_11790 PF04306 Protein of unknown function (DUF456) J9319_11795 PF06691 Protein of unknown function (DUF1189) J9319_11800 PF13302 Acetyltransferase (GNAT) domain J9319_11810 PF04551 GcpE protein J9319_11825 PF00480 ROK family J9319_11830 PF01475 Ferric uptake regulator family J9319_11835 PF00950 ABC 3 transport family J9319_11840 PF00005 ABC transporter J9319_11845 PF10035 Uncharacterized protein conserved in bacteria (DUF2179) J9319_11845 PF02588 Uncharacterised 5xTM membrane BCR, YitT family COG1284 J9319_11850 PF11116 Protein of unknown function (DUF2624) J9319_11855 PF01261 Xylose isomerase-like TIM barrel J9319_11860 PF00270 DEAD/DEAH box helicase J9319_11860 PF00271 Helicase conserved C-terminal domain J9319_11870 PF02401 LytB protein J9319_11875 PF01784 NIF3 (NGG1p interacting factor 3) J9319_11880 PF04816 tRNA (adenine(22)-N(1))-methyltransferase J9319_11885 PF13442 Cytochrome C oxidase, cbb3-type, subunit III J9319_11890 PF04545 Sigma-70, region 4 J9319_11890 PF04539 Sigma-70 region 3 J9319_11890 PF04542 Sigma-70 region 2 J9319_11890 PF00140 Sigma-70 factor, region 1.2 J9319_11890 PF03979 Sigma-70 factor, region 1.1 J9319_11895 PF10410 DnaB-helicase binding domain of primase J9319_11895 PF01807 CHC2 zinc finger J9319_11895 PF08275 DNA primase catalytic core, N-terminal domain J9319_11900 PF02639 Uncharacterized BCR, YaiI/YqxD family COG1671 J9319_11905 PF03618 Kinase/pyrophosphorylase J9319_11910 PF08279 HTH domain J9319_11910 PF00571 CBS domain J9319_11915 PF02092 Glycyl-tRNA synthetase beta subunit J9319_11920 PF02091 Glycyl-tRNA synthetase alpha subunit J9319_11925 PF02565 Recombination protein O C terminal J9319_11925 PF11967 Recombination protein O N terminal J9319_11930 PF14006 YqzL-like protein J9319_11935 PF07650 KH domain J9319_11935 PF01926 50S ribosome-binding GTPase J9319_11940 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region J9319_11945 PF01219 Prokaryotic diacylglycerol kinase J9319_11950 PF02130 Uncharacterized protein family UPF0054 J9319_11955 PF07697 7TM-HD extracellular J9319_11955 PF01966 HD domain J9319_11955 PF07698 7TM receptor with intracellular HD hydrolase J9319_11960 PF02562 PhoH-like protein J9319_11965 PF06898 Putative stage IV sporulation protein YqfD J9319_11970 PF07873 YabP family J9319_11980 PF12127 SigmaW regulon antibacterial J9319_11985 PF01957 NfeD-like C-terminal, partner-binding J9319_11985 PF01972 Serine dehydrogenase proteinase J9319_11990 PF09424 Yqey-like protein J9319_11995 PF01165 Ribosomal protein S21 J9319_12000 PF02690 Na+/Pi-cotransporter J9319_12005 PF00919 Uncharacterized protein family UPF0004 J9319_12005 PF04055 Radical SAM superfamily J9319_12005 PF01938 TRAM domain J9319_12010 PF04452 RNA methyltransferase J9319_12020 PF00684 DnaJ central domain J9319_12020 PF00226 DnaJ domain J9319_12020 PF01556 DnaJ C terminal domain J9319_12025 PF00012 Hsp70 protein J9319_12030 PF01025 GrpE J9319_12035 PF01628 HrcA protein C terminal domain J9319_12040 PF04055 Radical SAM superfamily J9319_12040 PF06969 HemN C-terminal domain J9319_12045 PF06421 GTP-binding protein LepA C-terminus J9319_12045 PF03144 Elongation factor Tu domain 2 J9319_12045 PF00009 Elongation factor Tu GTP binding domain J9319_12045 PF00679 Elongation factor G C-terminus J9319_12050 PF12438 Protein of unknown function (DUF3679) J9319_12055 PF07454 Stage II sporulation protein P (SpoIIP) J9319_12060 PF03418 Germination protease J9319_12065 PF01649 Ribosomal protein S20 J9319_12070 PF06144 DNA polymerase III, delta subunit J9319_12075 PF14141 YqzM-like protein J9319_12080 PF03772 Competence protein J9319_12080 PF13567 Domain of unknown function (DUF4131) J9319_12080 PF00753 Metallo-beta-lactamase superfamily J9319_12085 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region J9319_12090 PF10531 SLBB domain J9319_12095 PF14748 Pyrroline-5-carboxylate reductase dimerisation J9319_12095 PF03807 NADP oxidoreductase coenzyme F420-dependent J9319_12100 PF13649 Methyltransferase domain J9319_12110 PF01966 HD domain J9319_12115 PF01467 Cytidylyltransferase-like J9319_12120 PF01985 CRS1 / YhbY (CRM) domain J9319_12125 PF01488 Shikimate / quinate 5-dehydrogenase J9319_12125 PF08501 Shikimate dehydrogenase substrate binding domain J9319_12125 PF18317 Shikimate 5'-dehydrogenase C-terminal domain J9319_12130 PF01926 50S ribosome-binding GTPase J9319_12140 PF08970 Sporulation inhibitor A J9319_12150 PF00657 GDSL-like Lipase/Acylhydrolase J9319_12155 PF01522 Polysaccharide deacetylase J9319_12160 PF13176 Tetratricopeptide repeat J9319_12160 PF18801 response regulator aspartate phosphatase H, N terminal J9319_12165 PF04542 Sigma-70 region 2 J9319_12165 PF04545 Sigma-70, region 4 J9319_12200 PF01381 Helix-turn-helix J9319_12210 PF06114 IrrE N-terminal-like domain J9319_12230 PF07729 FCD domain J9319_12230 PF00392 Bacterial regulatory proteins, gntR family J9319_12240 PF07690 Major Facilitator Superfamily J9319_12250 PF02779 Transketolase, pyrimidine binding domain J9319_12250 PF02780 Transketolase, C-terminal domain J9319_12255 PF00456 Transketolase, thiamine diphosphate binding domain J9319_12275 PF11738 Protein of unknown function (DUF3298) J9319_12275 PF13739 Deacetylase PdaC J9319_12275 PF01522 Polysaccharide deacetylase J9319_12290 PF09221 Bacteriocin class IId cyclical uberolysin-like J9319_12310 PF00005 ABC transporter J9319_12330 PF00083 Sugar (and other) transporter J9319_12335 PF11762 L-arabinose isomerase C-terminal domain J9319_12335 PF02610 L-arabinose isomerase J9319_12340 PF00596 Class II Aldolase and Adducin N-terminal domain J9319_12350 PF00392 Bacterial regulatory proteins, gntR family J9319_12370 PF01380 SIS domain J9319_12375 PF00215 Orotidine 5'-phosphate decarboxylase / HUMPS family J9319_12380 PF01638 HxlR-like helix-turn-helix J9319_12385 PF07859 alpha/beta hydrolase fold J9319_12395 PF14176 YxiJ-like protein J9319_12445 PF00905 Penicillin binding protein transpeptidase domain J9319_12450 PF02771 Acyl-CoA dehydrogenase, N-terminal domain J9319_12450 PF08028 Acyl-CoA dehydrogenase, C-terminal domain J9319_12450 PF02770 Acyl-CoA dehydrogenase, middle domain J9319_12455 PF00005 ABC transporter J9319_12460 PF00497 Bacterial extracellular solute-binding proteins, family 3 J9319_12465 PF00528 Binding-protein-dependent transport system inner membrane component J9319_12470 PF00528 Binding-protein-dependent transport system inner membrane component J9319_12475 PF05067 Manganese containing catalase J9319_12480 PF08240 Alcohol dehydrogenase GroES-like domain J9319_12480 PF00107 Zinc-binding dehydrogenase J9319_12495 PF00465 Iron-containing alcohol dehydrogenase J9319_12500 PF01235 Sodium:alanine symporter family J9319_12505 PF03466 LysR substrate binding domain J9319_12505 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family J9319_12520 PF00005 ABC transporter J9319_12525 PF08240 Alcohol dehydrogenase GroES-like domain J9319_12525 PF00107 Zinc-binding dehydrogenase J9319_12530 PF08241 Methyltransferase domain J9319_12545 PF09501 Probable sporulation protein (Bac_small_yrzI) J9319_12550 PF14143 YrhC-like protein J9319_12555 PF01053 Cys/Met metabolism PLP-dependent enzyme J9319_12560 PF00291 Pyridoxal-phosphate dependent enzyme J9319_12565 PF01048 Phosphorylase superfamily J9319_12570 PF13649 Methyltransferase domain J9319_12575 PF10750 Protein of unknown function (DUF2536) J9319_12580 PF07423 Domain of unknown function (DUF1510) J9319_12585 PF03717 Penicillin-binding Protein dimerisation domain J9319_12585 PF00905 Penicillin binding protein transpeptidase domain J9319_12590 PF01272 Transcription elongation factor, GreA/GreB, C-term J9319_12590 PF03449 Transcription elongation factor, N-terminal J9319_12595 PF00485 Phosphoribulokinase / Uridine kinase family J9319_12600 PF01136 Peptidase family U32 J9319_12600 PF16325 Peptidase family U32 C-terminal domain J9319_12605 PF01136 Peptidase family U32 J9319_12610 PF01596 O-methyltransferase J9319_12615 PF02618 YceG-like family J9319_12620 PF02803 Thiolase, C-terminal domain J9319_12620 PF00108 Thiolase, N-terminal domain J9319_12625 PF00501 AMP-binding enzyme J9319_12625 PF13193 AMP-binding enzyme C-terminal domain J9319_12630 PF02632 BioY family J9319_12640 PF06949 Protein of unknown function (DUF1292) J9319_12645 PF03652 Holliday junction resolvase J9319_12650 PF06135 IreB regulatory phosphoprotein J9319_12655 PF02272 DHHA1 domain J9319_12655 PF01411 tRNA synthetases class II (A) J9319_12655 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain J9319_12660 PF01594 AI-2E family transporter J9319_12665 PF00005 ABC transporter J9319_12670 PF00497 Bacterial extracellular solute-binding proteins, family 3 J9319_12675 PF00528 Binding-protein-dependent transport system inner membrane component J9319_12680 PF00528 Binding-protein-dependent transport system inner membrane component J9319_12695 PF05239 PRC-barrel domain J9319_12700 PF14490 Helix-hairpin-helix containing domain J9319_12700 PF18335 ATP-dependent RecD-like DNA helicase SH3 domain J9319_12700 PF13538 UvrD-like helicase C-terminal domain J9319_12705 PF07719 Tetratricopeptide repeat J9319_12705 PF13181 Tetratricopeptide repeat J9319_12715 PF00266 Aminotransferase class-V J9319_12720 PF02082 Transcriptional regulator J9319_12725 PF12002 MgsA AAA+ ATPase C terminal J9319_12725 PF16193 AAA C-terminal domain J9319_12725 PF05496 Holliday junction DNA helicase RuvB P-loop domain J9319_12730 PF00899 ThiF family J9319_12740 PF00152 tRNA synthetases class II (D, K and N) J9319_12740 PF01336 OB-fold nucleic acid binding domain J9319_12740 PF02938 GAD domain J9319_12745 PF03129 Anticodon binding domain J9319_12745 PF13393 Histidyl-tRNA synthetase J9319_12755 PF01520 N-acetylmuramoyl-L-alanine amidase J9319_12755 PF08239 Bacterial SH3 domain J9319_12760 PF02580 D-Tyr-tRNA(Tyr) deacylase J9319_12765 PF13291 ACT domain J9319_12765 PF04607 Region found in RelA / SpoT proteins J9319_12765 PF02824 TGS domain J9319_12770 PF00156 Phosphoribosyl transferase domain J9319_12775 PF10141 Single-strand DNA-specific exonuclease, C terminal domain J9319_12775 PF01368 DHH family J9319_12775 PF02272 DHHA1 domain J9319_12775 PF17768 RecJ OB domain J9319_12780 PF06305 Lipopolysaccharide assembly protein A domain J9319_12785 PF02080 TrkA-C domain J9319_12790 PF07549 SecD/SecF GG Motif J9319_12790 PF02355 Protein export membrane protein J9319_12795 PF13797 Post-transcriptional regulator J9319_12800 PF01943 Polysaccharide biosynthesis protein J9319_12800 PF14667 Polysaccharide biosynthesis C-terminal domain J9319_12805 PF04239 Protein of unknown function (DUF421) J9319_12810 PF12670 Protein of unknown function (DUF3792) J9319_12815 PF02699 Preprotein translocase subunit J9319_12820 PF01702 Queuine tRNA-ribosyltransferase J9319_12825 PF02547 Queuosine biosynthesis protein J9319_12830 PF11146 Protein of unknown function (DUF2905) J9319_12835 PF05496 Holliday junction DNA helicase RuvB P-loop domain J9319_12835 PF05491 RuvB C-terminal winged helix domain J9319_12835 PF17864 RuvB AAA lid domain J9319_12840 PF07499 RuvA, C-terminal domain J9319_12840 PF01330 RuvA N terminal domain J9319_12845 PF08955 BofC C-terminal domain J9319_12845 PF08977 Bypass of Forespore C, N terminal J9319_12865 PF01964 Radical SAM ThiC family J9319_12865 PF13667 ThiC-associated domain J9319_12875 PF09580 Sporulation lipoprotein YhcN/YlaJ (Spore_YhcN_YlaJ) J9319_12880 PF01476 LysM domain J9319_12885 PF02445 Quinolinate synthetase A protein J9319_12890 PF02749 Quinolinate phosphoribosyl transferase, N-terminal domain J9319_12890 PF01729 Quinolinate phosphoribosyl transferase, C-terminal domain J9319_12895 PF02910 Fumarate reductase flavoprotein C-term J9319_12895 PF00890 FAD binding domain J9319_12900 PF00266 Aminotransferase class-V J9319_12905 PF02829 3H domain J9319_12905 PF08279 HTH domain J9319_12910 PF01842 ACT domain J9319_12910 PF00800 Prephenate dehydratase J9319_12915 PF01842 ACT domain J9319_12920 PF09269 Domain of unknown function (DUF1967) J9319_12920 PF01018 GTP1/OBG J9319_12920 PF01926 50S ribosome-binding GTPase J9319_12925 PF14682 Sporulation initiation phospho-transferase B, C-terminal J9319_12925 PF14689 Sensor_kinase_SpoOB-type, alpha-helical domain J9319_12930 PF01016 Ribosomal L27 protein J9319_12935 PF04327 Cysteine protease Prp J9319_12940 PF00829 Ribosomal prokaryotic L21 protein J9319_12945 PF02163 Peptidase family M50 J9319_12950 PF01551 Peptidase family M23 J9319_12955 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain J9319_12960 PF03775 Septum formation inhibitor MinC, C-terminal domain J9319_12965 PF04093 rod shape-determining protein MreD J9319_12970 PF04085 rod shape-determining protein MreC J9319_12980 PF04002 RadC-like JAB domain J9319_12985 PF02545 Maf-like protein J9319_12995 PF01478 Type IV leader peptidase family J9319_12995 PF06750 Bacterial Peptidase A24 N-terminal domain J9319_13000 PF02875 Mur ligase family, glutamate ligase domain J9319_13000 PF08245 Mur ligase middle domain J9319_13005 PF10458 Valyl tRNA synthetase tRNA binding arm J9319_13005 PF00133 tRNA synthetases class I (I, L, M and V) J9319_13005 PF08264 Anticodon-binding domain of tRNA J9319_13020 PF01476 LysM domain J9319_13025 PF00202 Aminotransferase class-III J9319_13030 PF00490 Delta-aminolevulinic acid dehydratase J9319_13035 PF02602 Uroporphyrinogen-III synthase HemD J9319_13040 PF01379 Porphobilinogen deaminase, dipyromethane cofactor binding domain J9319_13040 PF03900 Porphobilinogen deaminase, C-terminal domain J9319_13045 PF01578 Cytochrome C assembly protein J9319_13050 PF01488 Shikimate / quinate 5-dehydrogenase J9319_13050 PF05201 Glutamyl-tRNAGlu reductase, N-terminal domain J9319_13050 PF00745 Glutamyl-tRNAGlu reductase, dimerisation domain J9319_13060 PF01926 50S ribosome-binding GTPase J9319_13065 PF00004 ATPase family associated with various cellular activities (AAA) J9319_13065 PF05362 Lon protease (S16) C-terminal proteolytic domain J9319_13065 PF02190 ATP-dependent protease La (LON) substrate-binding domain J9319_13070 PF00004 ATPase family associated with various cellular activities (AAA) J9319_13070 PF05362 Lon protease (S16) C-terminal proteolytic domain J9319_13075 PF06689 ClpX C4-type zinc finger J9319_13075 PF07724 AAA domain (Cdc48 subfamily) J9319_13075 PF10431 C-terminal, D2-small domain, of ClpB protein J9319_13080 PF05697 Bacterial trigger factor protein (TF) J9319_13080 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase J9319_13080 PF05698 Bacterial trigger factor protein (TF) C-terminus J9319_13090 PF00694 Aconitase C-terminal domain J9319_13095 PF00330 Aconitase family (aconitate hydratase) J9319_13100 PF00180 Isocitrate/isopropylmalate dehydrogenase J9319_13105 PF08502 LeuA allosteric (dimerisation) domain J9319_13105 PF00682 HMGL-like J9319_13110 PF07991 Acetohydroxy acid isomeroreductase, NADPH-binding domain J9319_13110 PF01450 Acetohydroxy acid isomeroreductase, catalytic domain J9319_13115 PF01842 ACT domain J9319_13115 PF10369 Small subunit of acetolactate synthase J9319_13120 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain J9319_13120 PF00205 Thiamine pyrophosphate enzyme, central domain J9319_13120 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain J9319_13125 PF01063 Amino-transferase class IV J9319_13130 PF10282 Lactonase, 7-bladed beta-propeller J9319_13135 PF06803 Protein of unknown function (DUF1232) J9319_13140 PF04914 DltD protein J9319_13145 PF00550 Phosphopantetheine attachment site J9319_13150 PF03062 MBOAT, membrane-bound O-acyltransferase family J9319_13155 PF13193 AMP-binding enzyme C-terminal domain J9319_13155 PF00501 AMP-binding enzyme J9319_13160 PF12459 D-Ala-teichoic acid biosynthesis protein J9319_13185 PF00145 C-5 cytosine-specific DNA methylase J9319_13190 PF08863 YolD-like protein J9319_13205 PF13539 D-alanyl-D-alanine carboxypeptidase J9319_13210 PF04688 SPP1 phage holin J9319_13215 PF10779 Haemolysin XhlA J9319_13220 PF09693 Phage uncharacterised protein (Phage_XkdX) J9319_13225 PF09636 XkdW protein J9319_13270 PF01464 Transglycosylase SLT domain J9319_13340 PF17288 Terminase RNAseH like domain J9319_13340 PF04466 Phage terminase large subunit J9319_13345 PF10668 Phage terminase small subunit J9319_13410 PF17356 Phage-like element PBSX protein XtrA J9319_13430 PF01695 IstB-like ATP binding protein J9319_13435 PF07261 Replication initiation and membrane attachment J9319_13440 PF03837 RecT family J9319_13445 PF09588 YqaJ-like viral recombinase domain J9319_13455 PF17448 Uncharacterized YqaH-like J9319_13460 PF01381 Helix-turn-helix J9319_13480 PF01381 Helix-turn-helix J9319_13490 PF06114 IrrE N-terminal-like domain J9319_13495 PF02899 Phage integrase, N-terminal SAM-like domain J9319_13495 PF00589 Phage integrase family J9319_13505 PF12850 Calcineurin-like phosphoesterase superfamily domain J9319_13510 PF01725 Ham1 family J9319_13515 PF01138 3' exoribonuclease family, domain 1 J9319_13515 PF03725 3' exoribonuclease family, domain 2 J9319_13520 PF10646 Sporulation and spore germination J9319_13525 PF01177 Asp/Glu/Hydantoin racemase J9319_13530 PF01047 MarR family J9319_13535 PF00196 Bacterial regulatory proteins, luxR family J9319_13540 PF03600 Citrate transporter J9319_13545 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family J9319_13545 PF03466 LysR substrate binding domain J9319_13550 PF04303 PrpF protein J9319_13555 PF02237 Biotin protein ligase C terminal domain J9319_13555 PF03099 Biotin/lipoate A/B protein ligase family J9319_13560 PF03061 Thioesterase superfamily J9319_13565 PF13085 2Fe-2S iron-sulfur cluster binding domain J9319_13565 PF13183 4Fe-4S dicluster domain J9319_13570 PF00890 FAD binding domain J9319_13570 PF02910 Fumarate reductase flavoprotein C-term J9319_13575 PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit J9319_13580 PF10702 Protein of unknown function (DUF2507) J9319_13585 PF00696 Amino acid kinase family J9319_13585 PF01842 ACT domain J9319_13585 PF13840 ACT domain J9319_13590 PF08459 UvrC Helix-hairpin-helix N-terminal J9319_13590 PF02151 UvrB/uvrC motif J9319_13590 PF01541 GIY-YIG catalytic domain J9319_13595 PF00085 Thioredoxin J9319_13600 PF06964 Alpha-L-arabinofuranosidase C-terminal domain J9319_13605 PF00766 Electron transfer flavoprotein FAD-binding domain J9319_13605 PF01012 Electron transfer flavoprotein domain J9319_13610 PF01012 Electron transfer flavoprotein domain J9319_13615 PF00378 Enoyl-CoA hydratase/isomerase J9319_13620 PF00440 Bacterial regulatory proteins, tetR family J9319_13620 PF08359 YsiA-like protein, C-terminal region J9319_13625 PF00501 AMP-binding enzyme J9319_13625 PF13193 AMP-binding enzyme C-terminal domain J9319_13635 PF03994 Domain of Unknown Function (DUF350) J9319_13640 PF00488 MutS domain V J9319_13640 PF01713 Smr domain J9319_13645 PF14791 DNA polymerase beta thumb J9319_13645 PF14716 Helix-hairpin-helix domain J9319_13645 PF02811 PHP domain J9319_13650 PF02674 Colicin V production protein J9319_13655 PF05164 Cell division protein ZapA J9319_13660 PF11858 Domain of unknown function (DUF3378) J9319_13660 PF01351 Ribonuclease HII J9319_13665 PF03147 Ferredoxin-fold anticodon binding domain J9319_13665 PF17759 Phenylalanyl tRNA synthetase beta chain CLM domain J9319_13665 PF01588 Putative tRNA binding domain J9319_13665 PF03483 B3/4 domain J9319_13665 PF03484 tRNA synthetase B5 domain J9319_13670 PF02912 Aminoacyl tRNA synthetase class II, N-terminal domain J9319_13670 PF01409 tRNA synthetases class II core domain (F) J9319_13675 PF00588 SpoU rRNA Methylase family J9319_13675 PF08032 RNA 2'-O ribose methyltransferase substrate binding J9319_13680 PF14098 Small, acid-soluble spore protein I J9319_13685 PF13722 5TM C-terminal transporter carbon starvation CstA J9319_13685 PF02554 Carbon starvation protein CstA J9319_13690 PF05343 M42 glutamyl aminopeptidase J9319_13700 PF06961 Protein of unknown function (DUF1294) J9319_13705 PF00453 Ribosomal protein L20 J9319_13710 PF01632 Ribosomal protein L35 J9319_13715 PF05198 Translation initiation factor IF-3, N-terminal domain J9319_13715 PF00707 Translation initiation factor IF-3, C-terminal domain J9319_13725 PF13419 Haloacid dehalogenase-like hydrolase J9319_13730 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain J9319_13730 PF08447 PAS fold J9319_13730 PF13426 PAS domain J9319_13735 PF03129 Anticodon binding domain J9319_13735 PF02824 TGS domain J9319_13735 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) J9319_13735 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain J9319_13740 PF08812 YtxC-like family J9319_13745 PF09335 SNARE associated Golgi protein J9319_13750 PF01695 IstB-like ATP binding protein J9319_13750 PF07319 Primosomal protein DnaI N-terminus J9319_13755 PF07261 Replication initiation and membrane attachment J9319_13760 PF03477 ATP cone domain J9319_13770 PF02675 S-adenosylmethionine decarboxylase J9319_13775 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain J9319_13775 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain J9319_13780 PF01121 Dephospho-CoA kinase J9319_13785 PF02659 Putative manganese efflux pump J9319_13790 PF01149 Formamidopyrimidine-DNA glycosylase N-terminal domain J9319_13790 PF06831 Formamidopyrimidine-DNA glycosylase H2TH domain J9319_13790 PF06827 Zinc finger found in FPG and IleRS J9319_13795 PF00476 DNA polymerase family A J9319_13795 PF01367 5'-3' exonuclease, C-terminal SAM fold J9319_13795 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain J9319_13800 PF00512 His Kinase A (phospho-acceptor) domain J9319_13800 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase J9319_13800 PF00989 PAS fold J9319_13800 PF16736 Single Cache-like J9319_13805 PF00072 Response regulator receiver domain J9319_13805 PF00486 Transcriptional regulatory protein, C terminal J9319_13810 PF02866 lactate/malate dehydrogenase, alpha/beta C-terminal domain J9319_13810 PF00056 lactate/malate dehydrogenase, NAD binding domain J9319_13815 PF00180 Isocitrate/isopropylmalate dehydrogenase J9319_13820 PF00285 Citrate synthase, C-terminal domain J9319_13825 PF04284 Protein of unknown function (DUF441) J9319_13830 PF01594 AI-2E family transporter J9319_13835 PF04186 FxsA cytoplasmic membrane protein J9319_13840 PF00391 PEP-utilising enzyme, mobile domain J9319_13840 PF00224 Pyruvate kinase, barrel domain J9319_13840 PF02887 Pyruvate kinase, alpha/beta domain J9319_13845 PF00365 Phosphofructokinase J9319_13850 PF03255 Acetyl co-enzyme A carboxylase carboxyltransferase alpha subunit J9319_13855 PF17848 Acetyl-coA carboxylase zinc finger domain J9319_13855 PF01039 Carboxyl transferase domain J9319_13860 PF03949 Malic enzyme, NAD binding domain J9319_13860 PF00390 Malic enzyme, N-terminal domain J9319_13865 PF07733 Bacterial DNA polymerase III alpha NTPase domain J9319_13865 PF17657 Bacterial DNA polymerase III alpha subunit finger domain J9319_13865 PF14579 Helix-hairpin-helix motif J9319_13865 PF02811 PHP domain J9319_13865 PF01336 OB-fold nucleic acid binding domain J9319_13870 PF14034 Sporulation protein YtrH J9319_13885 PF01368 DHH family J9319_13885 PF02272 DHHA1 domain J9319_13890 PF14007 YtpI-like protein J9319_13895 PF03061 Thioesterase superfamily J9319_13895 PF00571 CBS domain J9319_13895 PF07085 DRTGG domain J9319_13895 PF00392 Bacterial regulatory proteins, gntR family J9319_13915 PF14698 Argininosuccinate lyase C-terminal J9319_13915 PF00206 Lyase J9319_13920 PF00764 Arginosuccinate synthase J9319_13925 PF00994 Probable molybdopterin binding domain J9319_13930 PF00871 Acetokinase family J9319_13935 PF02384 N-6 DNA Methylase J9319_13940 PF08534 Redoxin J9319_13945 PF09579 Sporulation protein YtfJ (Spore_YtfJ) J9319_13950 PF11167 Protein of unknown function (DUF2953) J9319_13955 PF06271 RDD family J9319_13960 PF01343 Peptidase family S49 J9319_13965 PF01513 ATP-NAD kinase J9319_13970 PF03880 DbpA RNA binding domain J9319_13970 PF00270 DEAD/DEAH box helicase J9319_13970 PF00271 Helicase conserved C-terminal domain J9319_13975 PF00487 Fatty acid desaturase J9319_13980 PF07730 Histidine kinase J9319_13985 PF00072 Response regulator receiver domain J9319_13985 PF00196 Bacterial regulatory proteins, luxR family J9319_13990 PF01497 Periplasmic binding protein J9319_13995 PF00072 Response regulator receiver domain J9319_13995 PF00486 Transcriptional regulatory protein, C terminal J9319_14000 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase J9319_14005 PF00005 ABC transporter J9319_14010 PF02687 FtsX-like permease family J9319_14015 PF01979 Amidohydrolase family J9319_14020 PF02525 Flavodoxin-like fold J9319_14035 PF01810 LysE type translocator J9319_14055 PF13193 AMP-binding enzyme C-terminal domain J9319_14055 PF00501 AMP-binding enzyme J9319_14060 PF00269 Small, acid-soluble spore proteins, alpha/beta type J9319_14065 PF02568 Thiamine biosynthesis protein (ThiI) J9319_14065 PF02926 THUMP domain J9319_14070 PF00266 Aminotransferase class-V J9319_14075 PF05525 Branched-chain amino acid transport protein J9319_14080 PF05525 Branched-chain amino acid transport protein J9319_14085 PF06160 Septation ring formation regulator, EzrA J9319_14090 PF02811 PHP domain J9319_14095 PF00440 Bacterial regulatory proteins, tetR family J9319_14100 PF13185 GAF domain J9319_14105 PF00163 Ribosomal protein S4/S9 N-terminal domain J9319_14105 PF01479 S4 domain J9319_14115 PF00857 Isochorismatase family J9319_14125 PF01674 Lipase (class 2) J9319_14130 PF03992 Antibiotic biosynthesis monooxygenase J9319_14135 PF00579 tRNA synthetases class I (W and Y) J9319_14135 PF01479 S4 domain J9319_14140 PF00501 AMP-binding enzyme J9319_14140 PF13193 AMP-binding enzyme C-terminal domain J9319_14145 PF00583 Acetyltransferase (GNAT) family J9319_14150 PF00571 CBS domain J9319_14155 PF00850 Histone deacetylase domain J9319_14160 PF00356 Bacterial regulatory proteins, lacI family J9319_14165 PF01817 Chorismate mutase type II J9319_14165 PF00793 DAHP synthetase I family J9319_14170 PF11009 Protein of unknown function (DUF2847) J9319_14175 PF12732 YtxH-like protein J9319_14180 PF06103 Bacterial protein of unknown function (DUF948) J9319_14185 PF01225 Mur ligase family, catalytic domain J9319_14185 PF02875 Mur ligase family, glutamate ligase domain J9319_14185 PF08245 Mur ligase middle domain J9319_14190 PF17854 FtsK alpha domain J9319_14190 PF09397 Ftsk gamma domain J9319_14190 PF01580 FtsK/SpoIIIE family J9319_14195 PF14794 Domain of unknown function (DUF4479) J9319_14195 PF01588 Putative tRNA binding domain J9319_14200 PF07285 Protein of unknown function (DUF1444) J9319_14205 PF00085 Thioredoxin J9319_14215 PF11071 Nucleoside 2-deoxyribosyltransferase YtoQ J9319_14220 PF05343 M42 glutamyl aminopeptidase J9319_14225 PF03413 Peptidase propeptide and YPEB domain J9319_14230 PF03949 Malic enzyme, NAD binding domain J9319_14230 PF00390 Malic enzyme, N-terminal domain J9319_14235 PF00753 Metallo-beta-lactamase superfamily J9319_14240 PF02390 Putative methyltransferase J9319_14245 PF14165 YtzH-like protein J9319_14250 PF01636 Phosphotransferase enzyme family J9319_14255 PF00781 Diacylglycerol kinase catalytic domain J9319_14270 PF00291 Pyridoxal-phosphate dependent enzyme J9319_14275 PF03575 Peptidase family S51 J9319_14280 PF01546 Peptidase family M20/M25/M40 J9319_14285 PF00860 Permease family J9319_14290 PF08220 DeoR-like helix-turn-helix domain J9319_14295 PF01479 S4 domain J9319_14295 PF00849 RNA pseudouridylate synthase J9319_14300 PF14667 Polysaccharide biosynthesis C-terminal domain J9319_14300 PF01943 Polysaccharide biosynthesis protein J9319_14315 PF02028 BCCT, betaine/carnitine/choline family transporter J9319_14320 PF03691 Uncharacterised protein family (UPF0167) J9319_14325 PF10957 Sporulation protein Cse60 J9319_14330 PF00581 Rhodanese-like domain J9319_14335 PF04854 Protein of unknown function, DUF624 J9319_14340 PF02894 Oxidoreductase family, C-terminal alpha/beta domain J9319_14340 PF01408 Oxidoreductase family, NAD-binding Rossmann fold J9319_14350 PF07470 Glycosyl Hydrolase Family 88 J9319_14355 PF00528 Binding-protein-dependent transport system inner membrane component J9319_14360 PF17853 GGDEF-like domain J9319_14360 PF12833 Helix-turn-helix domain J9319_14365 PF01638 HxlR-like helix-turn-helix J9319_14370 PF07690 Major Facilitator Superfamily J9319_14375 PF00248 Aldo/keto reductase family J9319_14380 PF13416 Bacterial extracellular solute-binding protein J9319_14385 PF00528 Binding-protein-dependent transport system inner membrane component J9319_14390 PF01370 NAD dependent epimerase/dehydratase family J9319_14395 PF01738 Dienelactone hydrolase family J9319_14400 PF08264 Anticodon-binding domain of tRNA J9319_14400 PF09334 tRNA synthetases class I (M) J9319_14400 PF13603 Leucyl-tRNA synthetase, Domain 2 J9319_14400 PF00133 tRNA synthetases class I (I, L, M and V) J9319_14405 PF14074 Protein of unknown function (DUF4257) J9319_14410 PF13426 PAS domain J9319_14410 PF01740 STAS domain J9319_14415 PF04791 LMBR1-like membrane protein J9319_14420 PF02687 FtsX-like permease family J9319_14420 PF12704 MacB-like periplasmic core domain J9319_14425 PF00005 ABC transporter J9319_14435 PF00005 ABC transporter J9319_14440 PF00392 Bacterial regulatory proteins, gntR family J9319_14455 PF10732 Protein of unknown function (DUF2524) J9319_14460 PF04055 Radical SAM superfamily J9319_14460 PF16199 Radical_SAM C-terminal domain J9319_14465 PF06962 Putative rRNA methylase J9319_14470 PF07070 SpoOM protein J9319_14475 PF10776 Protein of unknown function (DUF2600) J9319_14480 PF12146 Serine aminopeptidase, S33 J9319_14485 PF00132 Bacterial transferase hexapeptide (six repeats) J9319_14490 PF00733 Asparagine synthase J9319_14490 PF13537 Glutamine amidotransferase domain J9319_14495 PF02773 S-adenosylmethionine synthetase, C-terminal domain J9319_14495 PF02772 S-adenosylmethionine synthetase, central domain J9319_14495 PF00438 S-adenosylmethionine synthetase, N-terminal domain J9319_14500 PF01293 Phosphoenolpyruvate carboxykinase J9319_14505 PF10763 Protein of unknown function (DUF2584) J9319_14510 PF00326 Prolyl oligopeptidase family J9319_14515 PF01593 Flavin containing amine oxidoreductase J9319_14520 PF00535 Glycosyl transferase family 2 J9319_14540 PF00005 ABC transporter J9319_14545 PF00528 Binding-protein-dependent transport system inner membrane component J9319_14550 PF00293 NUDIX domain J9319_14555 PF02342 TerD domain J9319_14570 PF05105 Bacteriophage holin family J9319_14580 PF00210 Ferritin-like domain J9319_14590 PF13115 YtkA-like J9319_14595 PF02664 S-Ribosylhomocysteinase (LuxS) J9319_14600 PF01809 Putative membrane protein insertion efficiency factor J9319_14605 PF00484 Carbonic anhydrase J9319_14610 PF09223 ZinT (YodA) periplasmic lipocalin-like zinc-recruitment J9319_14610 PF01297 Zinc-uptake complex component A periplasmic J9319_14615 PF01197 Ribosomal protein L31 J9319_14620 PF01654 Cytochrome bd terminal oxidase subunit I J9319_14625 PF02322 Cytochrome bd terminal oxidase subunit II J9319_14630 PF07561 Domain of Unknown Function (DUF1540) J9319_14640 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain J9319_14640 PF13378 Enolase C-terminal domain-like J9319_14645 PF00501 AMP-binding enzyme J9319_14645 PF13193 AMP-binding enzyme C-terminal domain J9319_14650 PF00378 Enoyl-CoA hydratase/isomerase J9319_14655 PF00561 alpha/beta hydrolase fold J9319_14660 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain J9319_14660 PF16582 Middle domain of thiamine pyrophosphate J9319_14660 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain J9319_14665 PF00425 chorismate binding enzyme J9319_14670 PF01040 UbiA prenyltransferase family J9319_14675 PF01258 Prokaryotic dksA/traR C4-type zinc finger J9319_14680 PF03073 TspO/MBR family J9319_14805 PF09515 Thiamine transporter protein (Thia_YuaJ) J9319_14810 PF00583 Acetyltransferase (GNAT) family J9319_14815 PF06803 Protein of unknown function (DUF1232) J9319_14820 PF01098 Cell cycle protein J9319_14825 PF01098 Cell cycle protein J9319_14830 PF15975 Flotillin J9319_14830 PF01145 SPFH domain / Band 7 family J9319_14840 PF12867 DinB superfamily J9319_14845 PF00465 Iron-containing alcohol dehydrogenase J9319_14850 PF00171 Aldehyde dehydrogenase family J9319_14870 PF01471 Putative peptidoglycan binding domain J9319_14870 PF01510 N-acetylmuramoyl-L-alanine amidase J9319_14875 PF04688 SPP1 phage holin J9319_14880 PF10960 BhlA holin family J9319_14905 PF09693 Phage uncharacterised protein (Phage_XkdX) J9319_14910 PF09636 XkdW protein J9319_14925 PF10076 Uncharacterised protein conserved in bacteria (DUF2313) J9319_14930 PF04865 Baseplate J-like protein J9319_14935 PF10934 Protein of unknown function (DUF2634) J9319_14940 PF10844 Protein of unknown function (DUF2577) J9319_14950 PF01476 LysM domain J9319_14955 PF01464 Transglycosylase SLT domain J9319_14955 PF01464 Transglycosylase SLT domain J9319_14965 PF08890 Phage XkdN-like tail assembly chaperone protein, TAC J9319_14975 PF09393 Phage tail tube protein J9319_14980 PF04984 Phage tail sheath protein subtilisin-like domain J9319_14980 PF17481 Phage tail sheath protein beta-sandwich domain J9319_14980 PF17482 Phage tail sheath C-terminal domain J9319_14995 PF04883 Bacteriophage HK97-gp10, putative tail-component J9319_15000 PF12206 Domain of unknown function (DUF3599) J9319_15005 PF11436 Protein of unknown function (DUF3199) J9319_15010 PF05065 Phage capsid family J9319_15015 PF14550 Putative phage serine protease XkdF J9319_15020 PF04860 Phage portal protein J9319_15025 PF17288 Terminase RNAseH like domain J9319_15025 PF04466 Phage terminase large subunit J9319_15030 PF10668 Phage terminase small subunit J9319_15035 PF08281 Sigma-70, region 4 J9319_15040 PF17356 Phage-like element PBSX protein XtrA J9319_15045 PF05866 Endodeoxyribonuclease RusA J9319_15065 PF01381 Helix-turn-helix J9319_15075 PF04055 Radical SAM superfamily J9319_15075 PF06968 Biotin and Thiamin Synthesis associated domain J9319_15085 PF02673 Bacitracin resistance protein BacA J9319_15090 PF01594 AI-2E family transporter J9319_15100 PF01408 Oxidoreductase family, NAD-binding Rossmann fold J9319_15100 PF02894 Oxidoreductase family, C-terminal alpha/beta domain J9319_15105 PF01965 DJ-1/PfpI family J9319_15110 PF00672 HAMP domain J9319_15110 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain J9319_15110 PF02743 Cache domain J9319_15115 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain J9319_15115 PF00672 HAMP domain J9319_15115 PF02743 Cache domain J9319_15120 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain J9319_15120 PF00672 HAMP domain J9319_15120 PF02743 Cache domain J9319_15125 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain J9319_15125 PF00672 HAMP domain J9319_15125 PF02743 Cache domain J9319_15140 PF03060 Nitronate monooxygenase J9319_15145 PF01894 Uncharacterised protein family UPF0047 J9319_15150 PF03471 Transporter associated domain J9319_15150 PF00571 CBS domain J9319_15150 PF01595 Cyclin M transmembrane N-terminal domain J9319_15155 PF04298 Putative neutral zinc metallopeptidase J9319_15165 PF07885 Ion channel J9319_15165 PF02254 TrkA-N domain J9319_15170 PF08868 YugN-like family J9319_15180 PF00342 Phosphoglucose isomerase J9319_15185 PF00465 Iron-containing alcohol dehydrogenase J9319_15190 PF00465 Iron-containing alcohol dehydrogenase J9319_15195 PF04070 Domain of unknown function (DUF378) J9319_15200 PF00575 S1 RNA binding domain J9319_15205 PF00155 Aminotransferase class I and II J9319_15210 PF01037 Lrp/AsnC ligand binding domain J9319_15215 PF00561 alpha/beta hydrolase fold J9319_15215 PF08386 TAP-like protein J9319_15220 PF08958 Domain of unknown function (DUF1871) J9319_15225 PF00155 Aminotransferase class I and II J9319_15230 PF00512 His Kinase A (phospho-acceptor) domain J9319_15230 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase J9319_15240 PF08810 Kinase associated protein B J9319_15245 PF00929 Exonuclease J9319_15250 PF07690 Major Facilitator Superfamily J9319_15255 PF00912 Transglycosylase J9319_15255 PF00905 Penicillin binding protein transpeptidase domain J9319_15260 PF04134 Protein of unknown function, DUF393 J9319_15265 PF17328 Family of unknown function (DUF5366) J9319_15270 PF00989 PAS fold J9319_15270 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase J9319_15270 PF14689 Sensor_kinase_SpoOB-type, alpha-helical domain J9319_15270 PF17203 Single cache domain 3 J9319_15275 PF00072 Response regulator receiver domain J9319_15280 PF02608 ABC transporter substrate-binding protein PnrA-like J9319_15285 PF00005 ABC transporter J9319_15290 PF02653 Branched-chain amino acid transport system / permease component J9319_15295 PF02653 Branched-chain amino acid transport system / permease component J9319_15300 PF03390 2-hydroxycarboxylate transporter family J9319_15310 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus J9319_15310 PF00361 Proton-conducting membrane transporter J9319_15310 PF13244 Domain of unknown function (DUF4040) J9319_15315 PF04039 Domain related to MnhB subunit of Na+/H+ antiporter J9319_15320 PF00420 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L J9319_15325 PF00361 Proton-conducting membrane transporter J9319_15330 PF01899 Na+/H+ ion antiporter subunit J9319_15335 PF04066 Multiple resistance and pH regulation protein F (MrpF / PhaF) J9319_15340 PF03334 Na+/H+ antiporter subunit J9319_15345 PF03061 Thioesterase superfamily J9319_15350 PF00196 Bacterial regulatory proteins, luxR family J9319_15350 PF00072 Response regulator receiver domain J9319_15355 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase J9319_15355 PF07730 Histidine kinase J9319_15365 PF00348 Polyprenyl synthetase J9319_15370 PF08181 DegQ (SacQ) family J9319_15380 PF08668 HDOD domain J9319_15380 PF00563 EAL domain J9319_15385 PF17767 Nicotinate phosphoribosyltransferase (NAPRTase) N-terminal domain J9319_15385 PF17956 Nicotinate phosphoribosyltransferase C-terminal domain J9319_15385 PF04095 Nicotinate phosphoribosyltransferase (NAPRTase) family J9319_15390 PF00857 Isochorismatase family J9319_15395 PF07997 Protein of unknown function (DUF1694) J9319_15400 PF14166 YueH-like protein J9319_15405 PF10676 Spore germination protein gerPA/gerPF J9319_15410 PF10676 Spore germination protein gerPA/gerPF J9319_15415 PF01594 AI-2E family transporter J9319_15420 PF10842 Protein of unknown function (DUF2642) J9319_15430 PF01966 HD domain J9319_15435 PF00106 short chain dehydrogenase J9319_15440 PF17355 Family of unknown function (DUF5383) J9319_15450 PF01580 FtsK/SpoIIIE family J9319_15450 PF12538 DNA transporter J9319_15455 PF10140 WXG100 protein secretion system (Wss), protein YukC J9319_15460 PF08817 WXG100 protein secretion system (Wss), protein YukD J9319_15465 PF06013 Proteins of 100 residues with WXG J9319_15470 PF06018 CodY GAF-like domain J9319_15470 PF13556 PucR C-terminal helix-turn-helix domain J9319_15470 PF17853 GGDEF-like domain J9319_15475 PF01262 Alanine dehydrogenase/PNT, C-terminal domain J9319_15475 PF05222 Alanine dehydrogenase/PNT, N-terminal domain J9319_15480 PF02632 BioY family J9319_15485 PF13726 Na+-H+ antiporter family J9319_15485 PF03553 Na+/H+ antiporter family J9319_15490 PF00883 Cytosol aminopeptidase family, catalytic domain J9319_15490 PF02789 Cytosol aminopeptidase family, N-terminal domain J9319_15495 PF02681 Divergent PAP2 family J9319_15500 PF06725 3D domain J9319_15505 PF14068 Putative membrane protein J9319_15510 PF17302 Family of unknown function (DUF5351) J9319_15515 PF07992 Pyridine nucleotide-disulphide oxidoreductase J9319_15520 PF07992 Pyridine nucleotide-disulphide oxidoreductase J9319_15535 PF01521 Iron-sulphur cluster biosynthesis J9319_15540 PF01678 Diaminopimelate epimerase J9319_15545 PF07293 Protein of unknown function (DUF1450) J9319_15550 PF07992 Pyridine nucleotide-disulphide oxidoreductase J9319_15560 PF07315 Protein of unknown function (DUF1462) J9319_15565 PF01106 NifU-like domain J9319_15570 PF07676 WD40-like Beta Propeller Repeat J9319_15570 PF00326 Prolyl oligopeptidase family J9319_15575 PF08544 GHMP kinases C terminal J9319_15575 PF00288 GHMP kinases N terminal domain J9319_15580 PF00291 Pyridoxal-phosphate dependent enzyme J9319_15585 PF01842 ACT domain J9319_15585 PF03447 Homoserine dehydrogenase, NAD binding domain J9319_15585 PF00742 Homoserine dehydrogenase J9319_15590 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain J9319_15590 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain J9319_15600 PF04608 Phosphatidylglycerophosphatase A J9319_15605 PF13344 Haloacid dehalogenase-like hydrolase J9319_15610 PF01934 Protein of unknown function DUF86 J9319_15615 PF06265 Protein of unknown function (DUF1027) J9319_15620 PF09580 Sporulation lipoprotein YhcN/YlaJ (Spore_YhcN_YlaJ) J9319_15625 PF16881 N-terminal domain of lipoyl synthase of Radical_SAM family J9319_15625 PF04055 Radical SAM superfamily J9319_15630 PF01551 Peptidase family M23 J9319_15640 PF10903 Protein of unknown function (DUF2691) J9319_15645 PF09560 Sporulation protein YunB (Spo_YunB) J9319_15650 PF08827 Domain of unknown function (DUF1805) J9319_15655 PF02872 5'-nucleotidase, C-terminal domain J9319_15660 PF01904 Protein of unknown function DUF72 J9319_15665 PF17853 GGDEF-like domain J9319_15665 PF13556 PucR C-terminal helix-turn-helix domain J9319_15665 PF07905 Purine catabolism regulatory protein-like family J9319_15670 PF00190 Cupin J9319_15675 PF07690 Major Facilitator Superfamily J9319_15680 PF00266 Aminotransferase class-V J9319_15685 PF04231 Endonuclease I J9319_15700 PF01032 FecCD transport family J9319_15705 PF01032 FecCD transport family J9319_15710 PF01497 Periplasmic binding protein J9319_15720 PF07859 alpha/beta hydrolase fold J9319_15725 PF06146 Phosphate-starvation-inducible E J9319_15730 PF00512 His Kinase A (phospho-acceptor) domain J9319_15735 PF00072 Response regulator receiver domain J9319_15735 PF00486 Transcriptional regulatory protein, C terminal J9319_15740 PF04235 Protein of unknown function (DUF418) J9319_15755 PF02525 Flavodoxin-like fold J9319_15760 PF08338 Domain of unknown function (DUF1731) J9319_15760 PF01370 NAD dependent epimerase/dehydratase family J9319_15765 PF18665 Tetracyclin repressor-like, C-terminal domain J9319_15765 PF00440 Bacterial regulatory proteins, tetR family J9319_15770 PF13021 Domain of unknown function (DUF3885) J9319_15775 PF01458 Uncharacterized protein family (UPF0051) J9319_15780 PF01592 NifU-like N terminal domain J9319_15785 PF00266 Aminotransferase class-V J9319_15790 PF01458 Uncharacterized protein family (UPF0051) J9319_15795 PF00005 ABC transporter J9319_15805 PF02627 Carboxymuconolactone decarboxylase family J9319_15810 PF03180 NLPA lipoprotein J9319_15815 PF00528 Binding-protein-dependent transport system inner membrane component J9319_15820 PF00005 ABC transporter J9319_15820 PF09383 NIL domain J9319_15825 PF02036 SCP-2 sterol transfer family J9319_15830 PF00085 Thioredoxin J9319_15835 PF01751 Toprim domain J9319_15840 PF10830 Protein of unknown function (DUF2553) J9319_15845 PF01597 Glycine cleavage H-protein J9319_15850 PF03960 ArsC family J9319_15855 PF02771 Acyl-CoA dehydrogenase, N-terminal domain J9319_15855 PF02770 Acyl-CoA dehydrogenase, middle domain J9319_15855 PF00441 Acyl-CoA dehydrogenase, C-terminal domain J9319_15860 PF00108 Thiolase, N-terminal domain J9319_15860 PF02803 Thiolase, C-terminal domain J9319_15865 PF00378 Enoyl-CoA hydratase/isomerase J9319_15865 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain J9319_15865 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain J9319_15870 PF14115 YuzL-like protein J9319_15880 PF07875 Coat F domain J9319_15885 PF10835 Protein of unknown function (DUF2573) J9319_15890 PF00005 ABC transporter J9319_15900 PF00106 short chain dehydrogenase J9319_15905 PF13180 PDZ domain J9319_15910 PF00072 Response regulator receiver domain J9319_15910 PF00486 Transcriptional regulatory protein, C terminal J9319_15915 PF00672 HAMP domain J9319_15915 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase J9319_15915 PF00512 His Kinase A (phospho-acceptor) domain J9319_15925 PF00440 Bacterial regulatory proteins, tetR family J9319_15930 PF10415 Fumarase C C-terminus J9319_15930 PF00206 Lyase J9319_15935 PF13113 Protein of unknown function (DUF3970) J9319_15940 PF03323 Bacillus/Clostridium GerA spore germination protein J9319_15945 PF03845 Spore germination protein J9319_15950 PF05504 Spore germination B3/ GerAC like, C-terminal J9319_15960 PF00196 Bacterial regulatory proteins, luxR family J9319_15960 PF00072 Response regulator receiver domain J9319_15965 PF00672 HAMP domain J9319_15965 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase J9319_15965 PF07730 Histidine kinase J9319_15970 PF09922 Cell wall-active antibiotics response 4TMS YvqF J9319_15980 PF04012 PspA/IM30 family J9319_15990 PF01923 Cobalamin adenosyltransferase J9319_16000 PF04166 Pyridoxal phosphate biosynthetic protein PdxA J9319_16005 PF07005 Sugar-binding N-terminal domain J9319_16005 PF17042 Nucleotide-binding C-terminal domain J9319_16010 PF01590 GAF domain J9319_16010 PF00158 Sigma-54 interaction domain J9319_16025 PF00465 Iron-containing alcohol dehydrogenase J9319_16030 PF00701 Dihydrodipicolinate synthetase family J9319_16035 PF00005 ABC transporter J9319_16040 PF01032 FecCD transport family J9319_16045 PF01497 Periplasmic binding protein J9319_16050 PF00295 Glycosyl hydrolases family 28 J9319_16055 PF04295 D-galactarate dehydratase / Altronate hydrolase, C terminus J9319_16055 PF08666 SAF domain J9319_16060 PF08125 Mannitol dehydrogenase C-terminal domain J9319_16060 PF01232 Mannitol dehydrogenase Rossmann domain J9319_16065 PF00356 Bacterial regulatory proteins, lacI family J9319_16070 PF02614 Glucuronate isomerase J9319_16075 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase J9319_16075 PF00512 His Kinase A (phospho-acceptor) domain J9319_16080 PF00072 Response regulator receiver domain J9319_16080 PF00486 Transcriptional regulatory protein, C terminal J9319_16085 PF00005 ABC transporter J9319_16090 PF01032 FecCD transport family J9319_16095 PF01032 FecCD transport family J9319_16100 PF01497 Periplasmic binding protein J9319_16105 PF13520 Amino acid permease J9319_16110 PF09575 Small spore protein J (Spore_SspJ) J9319_16120 PF04307 LexA-binding, inner membrane-associated putative hydrolase J9319_16125 PF00884 Sulfatase J9319_16135 PF00528 Binding-protein-dependent transport system inner membrane component J9319_16140 PF00248 Aldo/keto reductase family J9319_16145 PF00480 ROK family J9319_16150 PF00999 Sodium/hydrogen exchanger family J9319_16155 PF03458 UPF0126 domain J9319_16160 PF02600 Disulfide bond formation protein DsbB J9319_16165 PF13462 Thioredoxin J9319_16170 PF00403 Heavy-metal-associated domain J9319_16175 PF00005 ABC transporter J9319_16180 PF00950 ABC 3 transport family J9319_16185 PF01297 Zinc-uptake complex component A periplasmic J9319_16195 PF13977 BetI-type transcriptional repressor, C-terminal J9319_16195 PF00440 Bacterial regulatory proteins, tetR family J9319_16200 PF08664 YcbB domain J9319_16200 PF00072 Response regulator receiver domain J9319_16205 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase J9319_16210 PF00206 Lyase J9319_16210 PF10415 Fumarase C C-terminus J9319_16215 PF00375 Sodium:dicarboxylate symporter family J9319_16225 PF00403 Heavy-metal-associated domain J9319_16230 PF00403 Heavy-metal-associated domain J9319_16235 PF02583 Metal-sensitive transcriptional repressor J9319_16245 PF00072 Response regulator receiver domain J9319_16245 PF00990 Diguanylate cyclase, GGDEF domain J9319_16275 PF01668 SmpB protein J9319_16280 PF08206 Ribonuclease B OB domain J9319_16280 PF00773 RNB domain J9319_16280 PF00575 S1 RNA binding domain J9319_16280 PF17876 Cold shock domain J9319_16285 PF12146 Serine aminopeptidase, S33 J9319_16290 PF03840 Preprotein translocase SecG subunit J9319_16295 PF18277 AbrB C-terminal domain J9319_16295 PF04014 Antidote-toxin recognition MazE, bacterial antitoxin J9319_16300 PF01381 Helix-turn-helix J9319_16315 PF01638 HxlR-like helix-turn-helix J9319_16320 PF00528 Binding-protein-dependent transport system inner membrane component J9319_16325 PF04069 Substrate binding domain of ABC-type glycine betaine transport system J9319_16330 PF00528 Binding-protein-dependent transport system inner membrane component J9319_16335 PF00005 ABC transporter J9319_16335 PF00571 CBS domain J9319_16340 PF12802 MarR family J9319_16345 PF01914 MarC family integral membrane protein J9319_16355 PF00583 Acetyltransferase (GNAT) family J9319_16375 PF00005 ABC transporter J9319_16385 PF03952 Enolase, N-terminal domain J9319_16385 PF00113 Enolase, C-terminal TIM barrel domain J9319_16390 PF06415 BPG-independent PGAM N-terminus (iPGM_N) J9319_16390 PF01676 Metalloenzyme superfamily J9319_16395 PF00121 Triosephosphate isomerase J9319_16400 PF00162 Phosphoglycerate kinase J9319_16405 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain J9319_16405 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain J9319_16410 PF04198 Putative sugar-binding domain J9319_16415 PF00324 Amino acid permease J9319_16420 PF00202 Aminotransferase class-III J9319_16425 PF00158 Sigma-54 interaction domain J9319_16425 PF13426 PAS domain J9319_16425 PF02954 Bacterial regulatory protein, Fis family J9319_16430 PF00392 Bacterial regulatory proteins, gntR family J9319_16430 PF07729 FCD domain J9319_16435 PF00309 Sigma-54 factor, Activator interacting domain (AID) J9319_16435 PF04963 Sigma-54 factor, core binding domain J9319_16435 PF04552 Sigma-54, DNA binding domain J9319_16440 PF09628 YvfG protein J9319_16445 PF01554 MatE J9319_16450 PF08352 Oligopeptide/dipeptide transporter, C-terminal region J9319_16450 PF00005 ABC transporter J9319_16455 PF08352 Oligopeptide/dipeptide transporter, C-terminal region J9319_16455 PF00005 ABC transporter J9319_16460 PF00528 Binding-protein-dependent transport system inner membrane component J9319_16465 PF00528 Binding-protein-dependent transport system inner membrane component J9319_16470 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle J9319_16475 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family J9319_16480 PF17836 PglD N-terminal domain J9319_16480 PF00132 Bacterial transferase hexapeptide (six repeats) J9319_16485 PF02397 Bacterial sugar transferase J9319_16490 PF14667 Polysaccharide biosynthesis C-terminal domain J9319_16490 PF01943 Polysaccharide biosynthesis protein J9319_16495 PF04230 Polysaccharide pyruvyl transferase J9319_16500 PF00535 Glycosyl transferase family 2 J9319_16510 PF13439 Glycosyltransferase Family 4 J9319_16510 PF00534 Glycosyl transferases group 1 J9319_16515 PF00535 Glycosyl transferase family 2 J9319_16520 PF00534 Glycosyl transferases group 1 J9319_16520 PF13439 Glycosyltransferase Family 4 J9319_16525 PF02719 Polysaccharide biosynthesis protein J9319_16530 PF13614 AAA domain J9319_16535 PF02706 Chain length determinant protein J9319_16540 PF01381 Helix-turn-helix J9319_16540 PF08671 Anti-repressor SinI J9319_16550 PF01497 Periplasmic binding protein J9319_16555 PF01032 FecCD transport family J9319_16560 PF01032 FecCD transport family J9319_16565 PF11738 Protein of unknown function (DUF3298) J9319_16565 PF13739 Deacetylase PdaC J9319_16565 PF01522 Polysaccharide deacetylase J9319_16570 PF12848 ABC transporter J9319_16570 PF00005 ABC transporter J9319_16575 PF00005 ABC transporter J9319_16580 PF00005 ABC transporter J9319_16585 PF00528 Binding-protein-dependent transport system inner membrane component J9319_16585 PF12911 N-terminal TM domain of oligopeptide transport permease C J9319_16590 PF00528 Binding-protein-dependent transport system inner membrane component J9319_16595 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle J9319_16600 PF00201 UDP-glucoronosyl and UDP-glucosyl transferase J9319_16605 PF01497 Periplasmic binding protein J9319_16620 PF00574 Clp protease J9319_16625 PF03641 Possible lysine decarboxylase J9319_16630 PF03819 MazG nucleotide pyrophosphohydrolase domain J9319_16635 PF00916 Sulfate permease family J9319_16635 PF01740 STAS domain J9319_16640 PF00484 Carbonic anhydrase J9319_16645 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain J9319_16645 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain J9319_16650 PF00545 ribonuclease J9319_16655 PF00797 N-acetyltransferase J9319_16660 PF00381 PTS HPr component phosphorylation site J9319_16665 PF02650 WhiA C-terminal HTH domain J9319_16665 PF14527 WhiA LAGLIDADG-like domain J9319_16665 PF10298 WhiA N-terminal LAGLIDADG-like domain J9319_16670 PF01933 Uncharacterised protein family UPF0052 J9319_16675 PF03668 P-loop ATPase protein family J9319_16680 PF00293 NUDIX domain J9319_16685 PF07992 Pyridine nucleotide-disulphide oxidoreductase J9319_16690 PF00877 NlpC/P60 family J9319_16700 PF01503 Phosphoribosyl-ATP pyrophosphohydrolase J9319_16700 PF01502 Phosphoribosyl-AMP cyclohydrolase J9319_16705 PF00977 Histidine biosynthesis protein J9319_16710 PF00977 Histidine biosynthesis protein J9319_16715 PF00117 Glutamine amidotransferase class-I J9319_16720 PF00475 Imidazoleglycerol-phosphate dehydratase J9319_16725 PF00815 Histidinol dehydrogenase J9319_16730 PF01634 ATP phosphoribosyltransferase J9319_16735 PF13393 Histidyl-tRNA synthetase J9319_16740 PF13529 Peptidase_C39 like family J9319_16745 PF13460 NAD(P)H-binding J9319_16750 PF02082 Transcriptional regulator J9319_16755 PF14602 Hexapeptide repeat of succinyl-transferase J9319_16760 PF13419 Haloacid dehalogenase-like hydrolase J9319_16765 PF07670 Nucleoside recognition J9319_16770 PF01790 Prolipoprotein diacylglyceryl transferase J9319_16775 PF07475 HPr Serine kinase C-terminal domain J9319_16775 PF02603 HPr Serine kinase N terminus J9319_16780 PF01979 Amidohydrolase family J9319_16785 PF01182 Glucosamine-6-phosphate isomerases/6-phosphogluconolactonase J9319_16790 PF00392 Bacterial regulatory proteins, gntR family J9319_16790 PF07702 UTRA domain J9319_16795 PF00149 Calcineurin-like phosphoesterase J9319_16800 PF04020 Mycobacterial 4 TMS phage holin, superfamily IV J9319_16805 PF04024 PspC domain J9319_16810 PF13349 Putative adhesin J9319_16825 PF17760 UvrA interaction domain J9319_16825 PF17755 UvrA DNA-binding domain J9319_16825 PF00005 ABC transporter J9319_16830 PF02151 UvrB/uvrC motif J9319_16830 PF12344 Ultra-violet resistance protein B J9319_16830 PF17757 UvrB interaction domain J9319_16830 PF00271 Helicase conserved C-terminal domain J9319_16830 PF04851 Type III restriction enzyme, res subunit J9319_16835 PF09964 Uncharacterized protein conserved in bacteria (DUF2198) J9319_16840 PF00391 PEP-utilising enzyme, mobile domain J9319_16840 PF01326 Pyruvate phosphate dikinase, PEP/pyruvate binding domain J9319_16845 PF00440 Bacterial regulatory proteins, tetR family J9319_16850 PF07690 Major Facilitator Superfamily J9319_16860 PF00072 Response regulator receiver domain J9319_16860 PF00486 Transcriptional regulatory protein, C terminal J9319_16865 PF16736 Single Cache-like J9319_16865 PF00512 His Kinase A (phospho-acceptor) domain J9319_16865 PF00989 PAS fold J9319_16865 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase J9319_16870 PF13231 Dolichyl-phosphate-mannose-protein mannosyltransferase J9319_16875 PF00535 Glycosyl transferase family 2 J9319_16880 PF00324 Amino acid permease J9319_16885 PF00881 Nitroreductase family J9319_16890 PF01638 HxlR-like helix-turn-helix J9319_16895 PF17820 PDZ domain J9319_16900 PF17423 Swarming motility protein J9319_16905 PF17820 PDZ domain J9319_16905 PF03572 Peptidase family S41 J9319_16905 PF01471 Putative peptidoglycan binding domain J9319_16910 PF01925 Sulfite exporter TauE/SafE J9319_16915 PF00877 NlpC/P60 family J9319_16920 PF02687 FtsX-like permease family J9319_16920 PF18075 FtsX extracellular domain J9319_16925 PF00005 ABC transporter J9319_16930 PF13442 Cytochrome C oxidase, cbb3-type, subunit III J9319_16935 PF10035 Uncharacterized protein conserved in bacteria (DUF2179) J9319_16935 PF02588 Uncharacterised 5xTM membrane BCR, YitT family COG1284 J9319_16955 PF01043 SecA preprotein cross-linking domain J9319_16955 PF07516 SecA Wing and Scaffold domain J9319_16955 PF02810 SEC-C motif J9319_16955 PF07517 SecA DEAD-like domain J9319_16960 PF02482 Sigma 54 modulation protein / S30EA ribosomal protein J9319_16960 PF16321 Sigma 54 modulation/S30EA ribosomal protein C terminus J9319_16965 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain J9319_16965 PF00672 HAMP domain J9319_16965 PF02743 Cache domain J9319_16980 PF02561 Flagellar protein FliS J9319_16985 PF07195 Flagellar hook-associated protein 2 C-terminus J9319_16985 PF02465 Flagellar hook-associated protein 2 N-terminus J9319_16985 PF07196 Flagellin hook IN motif J9319_16990 PF03646 FlaG protein J9319_16995 PF02599 Global regulator protein family J9319_17000 PF02623 FliW protein J9319_17010 PF00700 Bacterial flagellin C-terminal helical region J9319_17010 PF00669 Bacterial flagellin N-terminal helical region J9319_17015 PF00460 Flagella basal body rod protein J9319_17015 PF06429 Flagellar basal body rod FlgEFG protein C-terminal J9319_17020 PF05130 FlgN protein J9319_17040 PF10719 Late competence development protein ComFB J9319_17045 PF00271 Helicase conserved C-terminal domain J9319_17045 PF04851 Type III restriction enzyme, res subunit J9319_17050 PF02645 Uncharacterised protein, DegV family COG1307 J9319_17055 PF00196 Bacterial regulatory proteins, luxR family J9319_17055 PF00072 Response regulator receiver domain J9319_17060 PF05384 Sensor protein DegS J9319_17060 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase J9319_17060 PF07730 Histidine kinase J9319_17065 PF09186 Domain of unknown function (DUF1949) J9319_17065 PF01205 Uncharacterized protein family UPF0029 J9319_17070 PF03816 Cell envelope-related transcriptional attenuator domain J9319_17075 PF00953 Glycosyl transferase family 4 J9319_17085 PF00535 Glycosyl transferase family 2 J9319_17090 PF02706 Chain length determinant protein J9319_17095 PF04932 O-Antigen ligase J9319_17100 PF16363 GDP-mannose 4,6 dehydratase J9319_17105 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain J9319_17105 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain J9319_17105 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain J9319_17110 PF00534 Glycosyl transferases group 1 J9319_17110 PF13439 Glycosyltransferase Family 4 J9319_17115 PF01943 Polysaccharide biosynthesis protein J9319_17115 PF14667 Polysaccharide biosynthesis C-terminal domain J9319_17120 PF02397 Bacterial sugar transferase J9319_17130 PF04122 Putative cell wall binding repeat 2 J9319_17130 PF01520 N-acetylmuramoyl-L-alanine amidase J9319_17135 PF01520 N-acetylmuramoyl-L-alanine amidase J9319_17135 PF04122 Putative cell wall binding repeat 2 J9319_17140 PF04122 Putative cell wall binding repeat 2 J9319_17140 PF08486 Stage II sporulation protein J9319_17150 PF03816 Cell envelope-related transcriptional attenuator domain J9319_17155 PF02350 UDP-N-acetylglucosamine 2-epimerase J9319_17160 PF00483 Nucleotidyl transferase J9319_17165 PF00005 ABC transporter J9319_17170 PF01061 ABC-2 type transporter J9319_17175 PF00535 Glycosyl transferase family 2 J9319_17180 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family J9319_17185 PF07478 D-ala D-ala ligase C-terminus J9319_17185 PF01820 D-ala D-ala ligase N-terminus J9319_17190 PF04464 CDP-Glycerol:Poly(glycerophosphate) glycerophosphotransferase J9319_17195 PF16363 GDP-mannose 4,6 dehydratase J9319_17200 PF00483 Nucleotidyl transferase J9319_17205 PF04464 CDP-Glycerol:Poly(glycerophosphate) glycerophosphotransferase J9319_17215 PF01467 Cytidylyltransferase-like J9319_17220 PF03808 Glycosyl transferase WecB/TagA/CpsF family J9319_17225 PF04464 CDP-Glycerol:Poly(glycerophosphate) glycerophosphotransferase J9319_17230 PF08239 Bacterial SH3 domain J9319_17230 PF05036 Sporulation related domain J9319_17230 PF01832 Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase J9319_17235 PF04464 CDP-Glycerol:Poly(glycerophosphate) glycerophosphotransferase J9319_17240 PF01238 Phosphomannose isomerase type I J9319_17245 PF00528 Binding-protein-dependent transport system inner membrane component J9319_17250 PF00528 Binding-protein-dependent transport system inner membrane component J9319_17255 PF01547 Bacterial extracellular solute-binding protein J9319_17260 PF00196 Bacterial regulatory proteins, luxR family J9319_17260 PF00072 Response regulator receiver domain J9319_17265 PF02743 Cache domain J9319_17265 PF00672 HAMP domain J9319_17265 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase J9319_17265 PF06580 Histidine kinase J9319_17275 PF00583 Acetyltransferase (GNAT) family J9319_17280 PF01081 KDPG and KHG aldolase J9319_17285 PF00294 pfkB family carbohydrate kinase J9319_17290 PF00356 Bacterial regulatory proteins, lacI family J9319_17295 PF04962 KduI/IolB family J9319_17305 PF03323 Bacillus/Clostridium GerA spore germination protein J9319_17310 PF03845 Spore germination protein J9319_17315 PF05504 Spore germination B3/ GerAC like, C-terminal J9319_17320 PF00534 Glycosyl transferases group 1 J9319_17320 PF00535 Glycosyl transferase family 2 J9319_17325 PF00083 Sugar (and other) transporter J9319_17330 PF03816 Cell envelope-related transcriptional attenuator domain J9319_17340 PF00877 NlpC/P60 family J9319_17350 PF09587 Bacterial capsule synthesis protein PGA_cap J9319_17355 PF14102 Capsule biosynthesis CapC J9319_17360 PF08245 Mur ligase middle domain J9319_17365 PF03323 Bacillus/Clostridium GerA spore germination protein J9319_17375 PF05504 Spore germination B3/ GerAC like, C-terminal J9319_17380 PF00356 Bacterial regulatory proteins, lacI family J9319_17385 PF00294 pfkB family carbohydrate kinase J9319_17390 PF05025 RbsD / FucU transport protein family J9319_17395 PF00005 ABC transporter J9319_17400 PF02653 Branched-chain amino acid transport system / permease component J9319_17405 PF13407 Periplasmic binding protein domain J9319_17410 PF01613 Flavin reductase like domain J9319_17415 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family J9319_17415 PF03466 LysR substrate binding domain J9319_17420 PF00205 Thiamine pyrophosphate enzyme, central domain J9319_17420 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain J9319_17420 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain J9319_17425 PF03306 Alpha-acetolactate decarboxylase J9319_17430 PF01037 Lrp/AsnC ligand binding domain J9319_17430 PF13404 AsnC-type helix-turn-helix domain J9319_17435 PF02417 Chromate transporter J9319_17440 PF02417 Chromate transporter J9319_17445 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain J9319_17445 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain J9319_17445 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain J9319_17455 PF04434 SWIM zinc finger J9319_17460 PF12419 SNF2 Helicase protein J9319_17460 PF00271 Helicase conserved C-terminal domain J9319_17460 PF00176 SNF2 family N-terminal domain J9319_17465 PF01740 STAS domain J9319_17465 PF13426 PAS domain J9319_17480 PF14183 YwpF-like protein J9319_17485 PF01741 Large-conductance mechanosensitive channel, MscL J9319_17490 PF07977 FabA-like domain J9319_17495 PF18801 response regulator aspartate phosphatase H, N terminal J9319_17500 PF00460 Flagella basal body rod protein J9319_17500 PF06429 Flagellar basal body rod FlgEFG protein C-terminal J9319_17505 PF00460 Flagella basal body rod protein J9319_17505 PF06429 Flagellar basal body rod FlgEFG protein C-terminal J9319_17515 PF12116 Stage III sporulation protein D J9319_17520 PF01047 MarR family J9319_17525 PF07690 Major Facilitator Superfamily J9319_17530 PF01569 PAP2 superfamily J9319_17535 PF07690 Major Facilitator Superfamily J9319_17540 PF00497 Bacterial extracellular solute-binding proteins, family 3 J9319_17545 PF00528 Binding-protein-dependent transport system inner membrane component J9319_17550 PF00005 ABC transporter J9319_17555 PF00909 Ammonium Transporter Family J9319_17560 PF00543 Nitrogen regulatory protein P-II J9319_17565 PF01551 Peptidase family M23 J9319_17570 PF00583 Acetyltransferase (GNAT) family J9319_17585 PF00005 ABC transporter J9319_17610 PF00471 Ribosomal protein L33 J9319_17615 PF02492 CobW/HypB/UreG, nucleotide-binding domain J9319_17615 PF07683 Cobalamin synthesis protein cobW C-terminal domain J9319_17620 PF00253 Ribosomal protein S14p/S29e J9319_17625 PF06463 Molybdenum Cofactor Synthesis C J9319_17625 PF04055 Radical SAM superfamily J9319_17630 PF02634 FdhD/NarQ family J9319_17635 PF07690 Major Facilitator Superfamily J9319_17640 PF18364 Molybdopterin oxidoreductase N-terminal domain J9319_17640 PF01568 Molydopterin dinucleotide binding domain J9319_17640 PF00384 Molybdopterin oxidoreductase J9319_17645 PF00092 von Willebrand factor type A domain J9319_17650 PF00092 von Willebrand factor type A domain J9319_17655 PF08486 Stage II sporulation protein J9319_17660 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) J9319_17665 PF08680 TATA-box binding J9319_17670 PF06612 Protein of unknown function (DUF1146) J9319_17680 PF00401 ATP synthase, Delta/Epsilon chain, long alpha-helix domain J9319_17680 PF02823 ATP synthase, Delta/Epsilon chain, beta-sandwich domain J9319_17685 PF02874 ATP synthase alpha/beta family, beta-barrel domain J9319_17685 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain J9319_17690 PF00231 ATP synthase J9319_17695 PF02874 ATP synthase alpha/beta family, beta-barrel domain J9319_17695 PF00306 ATP synthase alpha/beta chain, C terminal domain J9319_17695 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain J9319_17700 PF00213 ATP synthase delta (OSCP) subunit J9319_17705 PF00430 ATP synthase B/B' CF(0) J9319_17710 PF00137 ATP synthase subunit C J9319_17715 PF00119 ATP synthase A chain J9319_17720 PF03899 ATP synthase I chain J9319_17730 PF00464 Serine hydroxymethyltransferase J9319_17735 PF04260 Protein of unknown function (DUF436) J9319_17740 PF02502 Ribose/Galactose Isomerase J9319_17745 PF01451 Low molecular weight phosphotyrosine protein phosphatase J9319_17750 PF02659 Putative manganese efflux pump J9319_17755 PF01300 Telomere recombination J9319_17755 PF03481 Putative GTP-binding controlling metal-binding J9319_17765 PF09551 Stage II sporulation protein R (spore_II_R) J9319_17775 PF17827 PrmC N-terminal domain J9319_17775 PF05175 Methyltransferase small domain J9319_17780 PF03462 PCRF domain J9319_17780 PF00472 RF-1 domain J9319_17785 PF13411 MerR HTH family regulatory protein J9319_17790 PF03547 Membrane transport protein J9319_17795 PF00390 Malic enzyme, N-terminal domain J9319_17795 PF03949 Malic enzyme, NAD binding domain J9319_17800 PF00265 Thymidine kinase J9319_17805 PF01197 Ribosomal protein L31 J9319_17810 PF07497 Rho termination factor, RNA-binding domain J9319_17810 PF07498 Rho termination factor, N-terminal domain J9319_17810 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain J9319_17815 PF03320 Bacterial fructose-1,6-bisphosphatase, glpX-encoded J9319_17820 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) J9319_17825 PF00923 Transaldolase/Fructose-6-phosphate aldolase J9319_17830 PF01116 Fructose-bisphosphate aldolase class-II J9319_17835 PF00072 Response regulator receiver domain J9319_17840 PF10740 Domain of unknown function (DUF2529) J9319_17845 PF00117 Glutamine amidotransferase class-I J9319_17845 PF06418 CTP synthase N-terminus J9319_17850 PF05066 HB1, ASXL, restriction endonuclease HTH domain J9319_17865 PF02771 Acyl-CoA dehydrogenase, N-terminal domain J9319_17865 PF00441 Acyl-CoA dehydrogenase, C-terminal domain J9319_17865 PF02770 Acyl-CoA dehydrogenase, middle domain J9319_17870 PF00441 Acyl-CoA dehydrogenase, C-terminal domain J9319_17870 PF02770 Acyl-CoA dehydrogenase, middle domain J9319_17870 PF02771 Acyl-CoA dehydrogenase, N-terminal domain J9319_17875 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain J9319_17875 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain J9319_17880 PF02803 Thiolase, C-terminal domain J9319_17880 PF00108 Thiolase, N-terminal domain J9319_17885 PF13183 4Fe-4S dicluster domain J9319_17885 PF02754 Cysteine-rich domain J9319_17890 PF13091 PLD-like domain J9319_17895 PF03851 UV-endonuclease UvdE J9319_17905 PF02016 LD-carboxypeptidase N-terminal domain J9319_17905 PF17676 LD-carboxypeptidase C-terminal domain J9319_17910 PF00005 ABC transporter J9319_17910 PF00664 ABC transporter transmembrane region J9319_17915 PF13396 Phospholipase_D-nuclease N-terminal J9319_17915 PF13091 PLD-like domain J9319_17920 PF02016 LD-carboxypeptidase N-terminal domain J9319_17920 PF17676 LD-carboxypeptidase C-terminal domain J9319_17925 PF03485 Arginyl tRNA synthetase N terminal domain J9319_17925 PF05746 DALR anticodon binding domain J9319_17925 PF00750 tRNA synthetases class I (R) J9319_17930 PF09148 Domain of unknown function (DUF1934) J9319_17940 PF00491 Arginase family J9319_17945 PF17284 Spermidine synthase tetramerisation domain J9319_17950 PF00912 Transglycosylase J9319_17950 PF00905 Penicillin binding protein transpeptidase domain J9319_17955 PF08741 YwhD family J9319_17960 PF02163 Peptidase family M50 J9319_17965 PF01361 Tautomerase enzyme J9319_17975 PF00296 Luciferase-like monooxygenase J9319_17980 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family J9319_17980 PF03466 LysR substrate binding domain J9319_17985 PF03358 NADPH-dependent FMN reductase J9319_17990 PF00296 Luciferase-like monooxygenase J9319_17995 PF00462 Glutaredoxin J9319_18000 PF00583 Acetyltransferase (GNAT) family J9319_18005 PF00528 Binding-protein-dependent transport system inner membrane component J9319_18015 PF00528 Binding-protein-dependent transport system inner membrane component J9319_18020 PF00005 ABC transporter J9319_18030 PF01966 HD domain J9319_18035 PF07293 Protein of unknown function (DUF1450) J9319_18050 PF00535 Glycosyl transferase family 2 J9319_18050 PF07238 PilZ domain J9319_18060 PF03099 Biotin/lipoate A/B protein ligase family J9319_18075 PF04740 LXG domain of WXG superfamily J9319_18075 PF14449 Pre-toxin TG J9319_18105 PF03737 Aldolase/RraA J9319_18115 PF01515 Phosphate acetyl/butaryl transferase J9319_18120 PF06778 Chlorite dismutase J9319_18125 PF07690 Major Facilitator Superfamily J9319_18130 PF01037 Lrp/AsnC ligand binding domain J9319_18135 PF07690 Major Facilitator Superfamily J9319_18145 PF07883 Cupin domain J9319_18160 PF00155 Aminotransferase class I and II J9319_18170 PF00908 dTDP-4-dehydrorhamnose 3,5-epimerase J9319_18175 PF04321 RmlD substrate binding domain J9319_18180 PF16363 GDP-mannose 4,6 dehydratase J9319_18185 PF00483 Nucleotidyl transferase J9319_18190 PF04101 Glycosyltransferase family 28 C-terminal domain J9319_18195 PF02348 Cytidylyltransferase J9319_18200 PF03102 NeuB family J9319_18200 PF08666 SAF domain J9319_18205 PF00583 Acetyltransferase (GNAT) family J9319_18210 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family J9319_18215 PF04464 CDP-Glycerol:Poly(glycerophosphate) glycerophosphotransferase J9319_18220 PF00535 Glycosyl transferase family 2 J9319_18230 PF09671 Spore coat protein (Spore_GerQ) J9319_18240 PF04241 Protein of unknown function (DUF423) J9319_18245 PF00860 Permease family J9319_18250 PF17261 Family of unknown function (DUF5327) J9319_18255 PF00171 Aldehyde dehydrogenase family J9319_18260 PF03167 Uracil DNA glycosylase superfamily J9319_18265 PF00535 Glycosyl transferase family 2 J9319_18275 PF08543 Phosphomethylpyrimidine kinase J9319_18310 PF08244 Glycosyl hydrolases family 32 C terminal J9319_18310 PF00251 Glycosyl hydrolases family 32 N-terminal domain J9319_18315 PF02378 Phosphotransferase system, EIIC J9319_18315 PF00367 phosphotransferase system, EIIB J9319_18320 PF03123 CAT RNA binding domain J9319_18320 PF00874 PRD domain J9319_18330 PF13860 FlgD Ig-like domain J9319_18330 PF05922 Peptidase inhibitor I9 J9319_18330 PF02225 PA domain J9319_18330 PF00082 Subtilase family J9319_18340 PF00296 Luciferase-like monooxygenase J9319_18345 PF00881 Nitroreductase family J9319_18350 PF01098 Cell cycle protein J9319_18355 PF17368 Spore morphogenesis and germination YwcE J9319_18360 PF03626 Prokaryotic Cytochrome C oxidase subunit IV J9319_18365 PF00510 Cytochrome c oxidase subunit III J9319_18370 PF00115 Cytochrome C and Quinol oxidase polypeptide I J9319_18375 PF00116 Cytochrome C oxidase subunit II, periplasmic domain J9319_18375 PF02790 Cytochrome C oxidase subunit II, transmembrane domain J9319_18385 PF01087 Galactose-1-phosphate uridyl transferase, N-terminal domain J9319_18385 PF02744 Galactose-1-phosphate uridyl transferase, C-terminal domain J9319_18390 PF16363 GDP-mannose 4,6 dehydratase J9319_18395 PF00288 GHMP kinases N terminal domain J9319_18395 PF08544 GHMP kinases C terminal J9319_18395 PF10509 Galactokinase galactose-binding signature J9319_18410 PF04138 GtrA-like protein J9319_18430 PF04341 Protein of unknown function, DUF485 J9319_18435 PF00474 Sodium:solute symporter family J9319_18450 PF02581 Thiamine monophosphate synthase J9319_18455 PF02110 Hydroxyethylthiazole kinase family J9319_18460 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family J9319_18460 PF03466 LysR substrate binding domain J9319_18465 PF03788 LrgA family J9319_18470 PF04172 LrgB-like family J9319_18475 PF10672 S-adenosylmethionine-dependent methyltransferase J9319_18475 PF17785 PUA-like domain J9319_18480 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily J9319_18485 PF00005 ABC transporter J9319_18490 PF00528 Binding-protein-dependent transport system inner membrane component J9319_18495 PF00497 Bacterial extracellular solute-binding proteins, family 3 J9319_18500 PF18801 response regulator aspartate phosphatase H, N terminal J9319_18510 PF04607 Region found in RelA / SpoT proteins J9319_18515 PF02653 Branched-chain amino acid transport system / permease component J9319_18520 PF00005 ABC transporter J9319_18525 PF13407 Periplasmic binding protein domain J9319_18530 PF13229 Right handed beta helix region J9319_18535 PF01063 Amino-transferase class IV J9319_18545 PF11975 Family 4 glycosyl hydrolase C-terminal domain J9319_18545 PF02056 Family 4 glycosyl hydrolase J9319_18550 PF02255 PTS system, Lactose/Cellobiose specific IIA subunit J9319_18555 PF02378 Phosphotransferase system, EIIC J9319_18560 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit J9319_18565 PF00874 PRD domain J9319_18565 PF08279 HTH domain J9319_18565 PF05043 Mga helix-turn-helix domain J9319_18565 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 J9319_18580 PF02812 Glu/Leu/Phe/Val dehydrogenase, dimerisation domain J9319_18580 PF00208 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase J9319_18595 PF08281 Sigma-70, region 4 J9319_18595 PF04542 Sigma-70 region 2 J9319_18600 PF00544 Pectate lyase J9319_18605 PF00664 ABC transporter transmembrane region J9319_18605 PF00005 ABC transporter J9319_18610 PF00664 ABC transporter transmembrane region J9319_18610 PF00005 ABC transporter J9319_18615 PF02322 Cytochrome bd terminal oxidase subunit II J9319_18620 PF01654 Cytochrome bd terminal oxidase subunit I J9319_18625 PF00005 ABC transporter J9319_18630 PF01032 FecCD transport family J9319_18635 PF01497 Periplasmic binding protein J9319_18640 PF04203 Sortase domain J9319_18645 PF00005 ABC transporter J9319_18650 PF01032 FecCD transport family J9319_18655 PF01497 Periplasmic binding protein J9319_18665 PF05031 Iron Transport-associated domain J9319_18670 PF05031 Iron Transport-associated domain J9319_18675 PF01638 HxlR-like helix-turn-helix J9319_18680 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily J9319_18685 PF00925 GTP cyclohydrolase II J9319_18685 PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase J9319_18690 PF01872 RibD C-terminal domain J9319_18690 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region J9319_18700 PF01522 Polysaccharide deacetylase J9319_18705 PF02255 PTS system, Lactose/Cellobiose specific IIA subunit J9319_18710 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit J9319_18715 PF00232 Glycosyl hydrolase family 1 J9319_18725 PF02378 Phosphotransferase system, EIIC J9319_18730 PF08279 HTH domain J9319_18730 PF05043 Mga helix-turn-helix domain J9319_18730 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 J9319_18730 PF00874 PRD domain J9319_18755 PF03553 Na+/H+ antiporter family J9319_18760 PF10415 Fumarase C C-terminus J9319_18760 PF00206 Lyase J9319_18765 PF17763 Glutaminase/Asparaginase C-terminal domain J9319_18765 PF00710 Asparaginase, N-terminal J9319_18770 PF01381 Helix-turn-helix J9319_18780 PF17353 Family of unknown function (DUF5381) J9319_18795 PF06013 Proteins of 100 residues with WXG J9319_18800 PF07687 Peptidase dimerisation domain J9319_18800 PF01546 Peptidase family M20/M25/M40 J9319_18815 PF01418 Helix-turn-helix domain, rpiR family J9319_18815 PF01380 SIS domain J9319_18820 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase J9319_18820 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase J9319_18830 PF02447 GntP family permease J9319_18835 PF01717 Cobalamin-independent synthase, Catalytic domain J9319_18845 PF00005 ABC transporter J9319_18865 PF00232 Glycosyl hydrolase family 1 J9319_18870 PF02378 Phosphotransferase system, EIIC J9319_18870 PF00367 phosphotransferase system, EIIB J9319_18870 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 J9319_18875 PF03123 CAT RNA binding domain J9319_18875 PF00874 PRD domain J9319_18880 PF09234 Domain of unknown function (DUF1963) J9319_18890 PF02361 Cobalt transport protein J9319_18895 PF00005 ABC transporter J9319_18900 PF09819 ABC-type cobalt transport system, permease component J9319_18905 PF03070 TENA/THI-4/PQQC family J9319_18935 PF00801 PKD domain J9319_18935 PF05547 Immune inhibitor A peptidase M6 J9319_18940 PF03992 Antibiotic biosynthesis monooxygenase J9319_18945 PF00881 Nitroreductase family J9319_18950 PF01047 MarR family J9319_18955 PF02885 Glycosyl transferase family, helical bundle domain J9319_18955 PF00591 Glycosyl transferase family, a/b domain J9319_18955 PF07831 Pyrimidine nucleoside phosphorylase C-terminal domain J9319_18960 PF07662 Na+ dependent nucleoside transporter C-terminus J9319_18960 PF01773 Na+ dependent nucleoside transporter N-terminus J9319_18965 PF01791 DeoC/LacD family aldolase J9319_18970 PF04198 Putative sugar-binding domain J9319_18980 PF01757 Acyltransferase family J9319_18985 PF07690 Major Facilitator Superfamily J9319_18990 PF00745 Glutamyl-tRNAGlu reductase, dimerisation domain J9319_18990 PF01488 Shikimate / quinate 5-dehydrogenase J9319_18990 PF05201 Glutamyl-tRNAGlu reductase, N-terminal domain J9319_18995 PF13649 Methyltransferase domain J9319_19000 PF00196 Bacterial regulatory proteins, luxR family J9319_19000 PF00072 Response regulator receiver domain J9319_19010 PF13411 MerR HTH family regulatory protein J9319_19015 PF01408 Oxidoreductase family, NAD-binding Rossmann fold J9319_19020 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain J9319_19025 PF00324 Amino acid permease J9319_19030 PF08713 DNA alkylation repair enzyme J9319_19035 PF02447 GntP family permease J9319_19040 PF02782 FGGY family of carbohydrate kinases, C-terminal domain J9319_19040 PF00370 FGGY family of carbohydrate kinases, N-terminal domain J9319_19045 PF01418 Helix-turn-helix domain, rpiR family J9319_19045 PF01380 SIS domain J9319_19050 PF01156 Inosine-uridine preferring nucleoside hydrolase J9319_19075 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family J9319_19075 PF03466 LysR substrate binding domain J9319_19080 PF00356 Bacterial regulatory proteins, lacI family J9319_19085 PF13416 Bacterial extracellular solute-binding protein J9319_19090 PF00528 Binding-protein-dependent transport system inner membrane component J9319_19095 PF00528 Binding-protein-dependent transport system inner membrane component J9319_19100 PF07745 Glycosyl hydrolase family 53 J9319_19105 PF02449 Beta-galactosidase J9319_19105 PF08533 Beta-galactosidase C-terminal domain J9319_19105 PF08532 Beta-galactosidase trimerisation domain J9319_19110 PF03600 Citrate transporter J9319_19120 PF12679 ABC-2 family transporter protein J9319_19125 PF00005 ABC transporter J9319_19130 PF03831 PhnA domain J9319_19130 PF08274 PhnA Zinc-Ribbon J9319_19135 PF02595 Glycerate kinase family J9319_19140 PF02447 GntP family permease J9319_19145 PF05651 Putative sugar diacid recognition J9319_19145 PF17853 GGDEF-like domain J9319_19145 PF13556 PucR C-terminal helix-turn-helix domain J9319_19150 PF17922 Tetracyclin repressor-like, C-terminal domain J9319_19150 PF00440 Bacterial regulatory proteins, tetR family J9319_19155 PF07690 Major Facilitator Superfamily J9319_19165 PF00005 ABC transporter J9319_19175 PF18801 response regulator aspartate phosphatase H, N terminal J9319_19180 PF00874 PRD domain J9319_19180 PF03123 CAT RNA binding domain J9319_19185 PF00232 Glycosyl hydrolase family 1 J9319_19190 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 J9319_19190 PF00367 phosphotransferase system, EIIB J9319_19190 PF02378 Phosphotransferase system, EIIC J9319_19215 PF00293 NUDIX domain J9319_19230 PF00324 Amino acid permease J9319_19235 PF00356 Bacterial regulatory proteins, lacI family J9319_19240 PF07690 Major Facilitator Superfamily J9319_19245 PF18317 Shikimate 5'-dehydrogenase C-terminal domain J9319_19245 PF08501 Shikimate dehydrogenase substrate binding domain J9319_19250 PF07690 Major Facilitator Superfamily J9319_19255 PF00232 Glycosyl hydrolase family 1 J9319_19260 PF00874 PRD domain J9319_19260 PF03123 CAT RNA binding domain J9319_19265 PF00367 phosphotransferase system, EIIB J9319_19265 PF02378 Phosphotransferase system, EIIC J9319_19265 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 J9319_19280 PF04740 LXG domain of WXG superfamily J9319_19280 PF14410 HNH/ENDO VII superfamily nuclease with conserved GHE residues J9319_19280 PF14449 Pre-toxin TG J9319_19290 PF00232 Glycosyl hydrolase family 1 J9319_19295 PF00367 phosphotransferase system, EIIB J9319_19295 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 J9319_19295 PF02378 Phosphotransferase system, EIIC J9319_19300 PF07702 UTRA domain J9319_19300 PF00392 Bacterial regulatory proteins, gntR family J9319_19315 PF02567 Phenazine biosynthesis-like protein J9319_19320 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family J9319_19320 PF03466 LysR substrate binding domain J9319_19340 PF00027 Cyclic nucleotide-binding domain J9319_19340 PF13545 Crp-like helix-turn-helix domain J9319_19355 PF00512 His Kinase A (phospho-acceptor) domain J9319_19355 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase J9319_19355 PF00672 HAMP domain J9319_19360 PF00486 Transcriptional regulatory protein, C terminal J9319_19360 PF00072 Response regulator receiver domain J9319_19365 PF12823 Domain of unknown function (DUF3817) J9319_19365 PF03176 MMPL family J9319_19370 PF16123 Hydroxyacylglutathione hydrolase C-terminus J9319_19370 PF00753 Metallo-beta-lactamase superfamily J9319_19380 PF01966 HD domain J9319_19385 PF02590 Predicted SPOUT methyltransferase J9319_19390 PF14116 YyzF-like protein J9319_19395 PF02361 Cobalt transport protein J9319_19400 PF12558 ATP-binding cassette cobalt transporter J9319_19400 PF00005 ABC transporter J9319_19405 PF07155 ECF-type riboflavin transporter, S component J9319_19420 PF00005 ABC transporter J9319_19425 PF00583 Acetyltransferase (GNAT) family J9319_19430 PF13180 PDZ domain J9319_19435 PF00753 Metallo-beta-lactamase superfamily J9319_19440 PF09648 YycH protein J9319_19445 PF07435 YycH protein J9319_19450 PF00672 HAMP domain J9319_19450 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase J9319_19450 PF13426 PAS domain J9319_19450 PF00512 His Kinase A (phospho-acceptor) domain J9319_19455 PF00486 Transcriptional regulatory protein, C terminal J9319_19455 PF00072 Response regulator receiver domain J9319_19480 PF00578 AhpC/TSA family J9319_19490 PF04235 Protein of unknown function (DUF418) J9319_19495 PF00709 Adenylosuccinate synthetase J9319_19500 PF00440 Bacterial regulatory proteins, tetR family J9319_19505 PF00067 Cytochrome P450 J9319_19510 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily J9319_19515 PF00772 DnaB-like helicase N terminal domain J9319_19515 PF03796 DnaB-like helicase C terminal domain J9319_19520 PF16226 Domain of unknown function (DUF4885) J9319_19530 PF00756 Putative esterase J9319_19535 PF01497 Periplasmic binding protein J9319_19535 PF12833 Helix-turn-helix domain J9319_19540 PF01497 Periplasmic binding protein J9319_19545 PF00756 Putative esterase J9319_19550 PF14174 YycC-like protein J9319_19555 PF07690 Major Facilitator Superfamily J9319_19560 PF01281 Ribosomal protein L9, N-terminal domain J9319_19560 PF03948 Ribosomal protein L9, C-terminal domain J9319_19565 PF01368 DHH family J9319_19565 PF02272 DHHA1 domain J9319_19570 PF09991 Predicted membrane protein (DUF2232) J9319_19575 PF02833 DHHA2 domain J9319_19575 PF01368 DHH family J9319_19580 PF13739 Deacetylase PdaC J9319_19580 PF11738 Protein of unknown function (DUF3298) J9319_19585 PF04542 Sigma-70 region 2 J9319_19585 PF08281 Sigma-70, region 4 J9319_19595 PF00199 Catalase J9319_19595 PF06628 Catalase-related immune-responsive J9319_19600 PF03358 NADPH-dependent FMN reductase J9319_19605 PF01738 Dienelactone hydrolase family J9319_19610 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily J9319_19615 PF00528 Binding-protein-dependent transport system inner membrane component J9319_19620 PF00571 CBS domain J9319_19620 PF00005 ABC transporter J9319_19625 PF01084 Ribosomal protein S18 J9319_19630 PF00436 Single-strand binding protein family J9319_19635 PF01250 Ribosomal protein S6 J9319_19640 PF01926 50S ribosome-binding GTPase J9319_19640 PF06071 Protein of unknown function (DUF933) J9319_19645 PF06107 Bacterial protein of unknown function (DUF951) J9319_19665 PF06866 Protein of unknown function (DUF1256) J9319_19670 PF02195 ParB-like nuclease domain J9319_19670 PF17762 HTH domain found in ParB protein J9319_19675 PF13614 AAA domain J9319_19685 PF02195 ParB-like nuclease domain J9319_19685 PF17762 HTH domain found in ParB protein J9319_19690 PF02527 rRNA small subunit methyltransferase G J9319_19695 PF01134 Glucose inhibited division protein A J9319_19695 PF13932 GidA associated domain J9319_19700 PF01926 50S ribosome-binding GTPase J9319_19700 PF12631 MnmE helical domain J9319_19700 PF10396 GTP-binding protein TrmE N-terminus J9319_19705 PF14804 Jag N-terminus J9319_19705 PF01424 R3H domain J9319_19710 PF02096 60Kd inner membrane protein J9319_19715 PF00825 Ribonuclease P J9319_19720 PF00468 Ribosomal protein L34