locus-tag	class	description
J9319_00005	COG0593	it binds specifically double-stranded DNA at a 9 bp consensus (dnaA box) 5'-TTATC CA A CA A-3'. DnaA binds to ATP and to acidic phospholipids
J9319_00010	COG0592	DNA-directed DNA polymerase activity
J9319_00015	COG2501	S4 domain
J9319_00020	COG1195	it is required for DNA replication and normal SOS inducibility. RecF binds preferentially to single-stranded, linear DNA. It also seems to bind ATP
J9319_00030	COG0187	DNA topoisomerase II activity
J9319_00035	COG0188	A type II topoisomerase that negatively supercoils closed circular double-stranded (ds) DNA in an ATP-dependent manner to modulate DNA topology and maintain chromosomes in an underwound state. Negative supercoiling favors strand separation, and DNA replication, transcription, recombination and repair, all of which involve strand separation. Also able to catalyze the interconversion of other topological isomers of dsDNA rings, including catenanes and knotted rings. Type II topoisomerases break and join 2 DNA strands simultaneously in an ATP-dependent manner
J9319_00070	COG0516	GMP reductase activity
J9319_00070	COG0517	IMP dehydrogenase activity
J9319_00075	COG1686	Belongs to the peptidase S11 family
J9319_00080	COG1167	Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain MocR family and their eukaryotic orthologs
J9319_00085	COG0214	Catalyzes the formation of pyridoxal 5'-phosphate from ribose 5-phosphate (RBP), glyceraldehyde 3-phosphate (G3P) and ammonia. The ammonia is provided by the PdxT subunit. Can also use ribulose 5-phosphate and dihydroxyacetone phosphate as substrates, resulting from enzyme-catalyzed isomerization of RBP and G3P, respectively
J9319_00090	COG0311	Catalyzes the hydrolysis of glutamine to glutamate and ammonia as part of the biosynthesis of pyridoxal 5'-phosphate. The resulting ammonia molecule is channeled to the active site of PdxS
J9319_00095	COG0172	Catalyzes the attachment of serine to tRNA(Ser). Is also able to aminoacylate tRNA(Sec) with serine, to form the misacylated tRNA L-seryl-tRNA(Sec), which will be further converted into selenocysteinyl-tRNA(Sec)
J9319_00100	COG0840	transmembrane signaling receptor activity
J9319_00110	COG1428	Deoxynucleoside kinase
J9319_00115	COG1428	Deoxynucleoside kinase
J9319_00120	COG1388	LysM domain
J9319_00120	COG3858	chitin binding
J9319_00125	COG1335	isochorismatase
J9319_00130	COG0590	tRNA wobble adenosine to inosine editing
J9319_00140	COG2812	DNA polymerase III is a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria. This DNA polymerase also exhibits 3' to 5' exonuclease activity
J9319_00145	COG0718	Binds to DNA and alters its conformation. May be involved in regulation of gene expression, nucleoid organization and DNA protection
J9319_00150	COG0353	May play a role in DNA repair. It seems to be involved in an RecBC-independent recombinational process of DNA repair. It may act with RecF and RecO
J9319_00195	COG4915	5-bromo-4-chloroindolyl phosphate hydrolysis protein
J9319_00200	COG3853	Toxic anion resistance protein (TelA)
J9319_00205	COG1982	Orn Lys Arg decarboxylase major
J9319_00210	COG0125	Phosphorylation of dTMP to form dTDP in both de novo and salvage pathways of dTTP synthesis
J9319_00215	COG3870	Protein conserved in bacteria
J9319_00220	COG1728	Protein conserved in bacteria
J9319_00225	COG0470	DNA polymerase III
J9319_00230	COG1774	PSP1 C-terminal conserved region
J9319_00235	COG4467	Involved in initiation control of chromosome replication
J9319_00240	COG4123	Specifically methylates the adenine in position 37 of tRNA(1)(Val) (anticodon cmo5UAC)
J9319_00245	COG2827	Endonuclease containing a URI domain
J9319_00250	COG0313	Catalyzes the 2'-O-methylation of the ribose of cytidine 1402 (C1402) in 16S rRNA
J9319_00255	COG2002	toxin-antitoxin pair type II binding
J9319_00260	COG0073	Is required not only for elongation of protein synthesis but also for the initiation of all mRNA translation through initiator tRNA(fMet) aminoacylation
J9319_00260	COG0143	Is required not only for elongation of protein synthesis but also for the initiation of all mRNA translation through initiator tRNA(fMet) aminoacylation
J9319_00265	COG0084	hydrolase, TatD family'
J9319_00270	COG3583	domain protein
J9319_00270	COG3584	3D domain protein
J9319_00275	COG1658	Required for correct processing of both the 5' and 3' ends of 5S rRNA precursor. Cleaves both sides of a double-stranded region yielding mature 5S rRNA in one step
J9319_00280	COG0030	16S rRNA (adenine(1518)-N(6)/adenine(1519)-N(6))-dimethyltransferase activity
J9319_00290	COG4466	Protein conserved in bacteria
J9319_00300	COG1947	Catalyzes the phosphorylation of the position 2 hydroxy group of 4-diphosphocytidyl-2C-methyl-D-erythritol
J9319_00305	COG0503	Catalyzes a salvage reaction resulting in the formation of AMP, that is energically less costly than de novo synthesis
J9319_00310	COG0251	oxidation-reduction process
J9319_00315	COG2088	sporulation resulting in formation of a cellular spore
J9319_00325	COG0462	Involved in the biosynthesis of the central metabolite phospho-alpha-D-ribosyl-1-pyrophosphate (PRPP) via the transfer of pyrophosphoryl group from ATP to 1-hydroxyl of ribose-5-phosphate (Rib-5-P)
J9319_00330	COG1825	This is one of the proteins that binds to the 5S RNA in the ribosome where it forms part of the central protuberance
J9319_00335	COG0193	aminoacyl-tRNA hydrolase activity
J9319_00345	COG1197	Couples transcription and DNA repair by recognizing RNA polymerase (RNAP) stalled at DNA lesions. Mediates ATP-dependent release of RNAP and its truncated transcript from the DNA, and recruitment of nucleotide excision repair machinery to the damaged site
J9319_00350	COG2002	toxin-antitoxin pair type II binding
J9319_00355	COG2244	polysaccharide biosynthetic process
J9319_00360	COG3956	TIGRFAM MazG family protein
J9319_00365	COG1188	Ribosome-associated heat shock protein implicated in the recycling of the 50S subunit, (S4 paralog))
J9319_00380	COG2919	Essential cell division protein. May link together the upstream cell division proteins, which are predominantly cytoplasmic, with the downstream cell division proteins, which are predominantly periplasmic
J9319_00385	COG1098	S1 RNA binding domain
J9319_00400	COG2208	phosphoserine phosphatase activity
J9319_00405	COG2304	oxidoreductase activity
J9319_00410	COG0515	serine threonine protein kinase
J9319_00415	COG0037	tRNA processing
J9319_00420	COG0634	Belongs to the purine pyrimidine phosphoribosyltransferase family
J9319_00425	COG0465	Acts as a processive, ATP-dependent zinc metallopeptidase for both cytoplasmic and membrane proteins. Plays a role in the quality control of integral membrane proteins
J9319_00430	COG1521	Catalyzes the phosphorylation of pantothenate (Pan), the first step in CoA biosynthesis
J9319_00435	COG1281	Redox regulated molecular chaperone. Protects both thermally unfolding and oxidatively damaged proteins from irreversible aggregation. Plays an important role in the bacterial defense system toward oxidative stress
J9319_00440	COG0760	Chaperone involved in the correct folding and assembly of outer membrane proteins. Recognizes specific patterns of aromatic residues and the orientation of their side chains, which are found more frequently in integral outer membrane proteins. May act in both early periplasmic and late outer membrane-associated steps of protein maturation
J9319_00445	COG0031	Belongs to the cysteine synthase cystathionine beta- synthase family
J9319_00450	COG0147	Part of a heterotetrameric complex that catalyzes the two-step biosynthesis of anthranilate, an intermediate in the biosynthesis of L-tryptophan. In the first step, the glutamine- binding beta subunit (TrpG) of anthranilate synthase (AS) provides the glutamine amidotransferase activity which generates ammonia as a substrate that, along with chorismate, is used in the second step, catalyzed by the large alpha subunit of AS (TrpE) to produce anthranilate. In the absence of TrpG, TrpE can synthesize anthranilate directly from chorismate and high concentrations of ammonia
J9319_00455	COG0512	Glutamine amidotransferase of anthranilate synthase
J9319_00460	COG0115	Belongs to the class-IV pyridoxal-phosphate-dependent aminotransferase family
J9319_00465	COG0294	Catalyzes the condensation of para-aminobenzoate (pABA) with 6-hydroxymethyl-7,8-dihydropterin diphosphate (DHPt-PP) to form 7,8-dihydropteroate (H2Pte), the immediate precursor of folate derivatives
J9319_00470	COG1539	Catalyzes the conversion of 7,8-dihydroneopterin to 6- hydroxymethyl-7,8-dihydropterin
J9319_00475	COG0801	2-amino-4-hydroxy-6-hydroxymethyldihydropteridine pyrophosphokinase
J9319_00480	COG1396	sequence-specific DNA binding
J9319_00485	COG0042	Catalyzes the synthesis of 5,6-dihydrouridine (D), a modified base found in the D-loop of most tRNAs, via the reduction of the C5-C6 double bond in target uridines
J9319_00490	COG1190	Belongs to the class-II aminoacyl-tRNA synthetase family
J9319_00570	COG4463	regulation of RNA biosynthetic process
J9319_00575	COG3880	PFAM UvrB UvrC protein
J9319_00580	COG3869	Catalyzes the specific phosphorylation of arginine residues in
J9319_00585	COG0542	response to heat
J9319_00590	COG1066	DNA-dependent ATPase involved in processing of recombination intermediates, plays a role in repairing DNA breaks. Stimulates the branch migration of RecA-mediated strand transfer reactions, allowing the 3' invading strand to extend heteroduplex DNA faster. Binds ssDNA in the presence of ADP but not other nucleotides, has ATPase activity that is stimulated by ssDNA and various branched DNA structures, but inhibited by SSB. Does not have RecA's homology-searching function
J9319_00595	COG1623	Has also diadenylate cyclase activity, catalyzing the condensation of 2 ATP molecules into cyclic di-AMP (c-di-AMP). c- di-AMP acts as a signaling molecule that couples DNA integrity with progression of sporulation. The rise in c-di-AMP level generated by DisA while scanning the chromosome, operates as a positive signal that advances sporulation
J9319_00600	COG4956	integral membrane protein (PIN domain superfamily)
J9319_00605	COG1211	2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase activity
J9319_00610	COG0245	2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase activity
J9319_00615	COG0008	Catalyzes the attachment of glutamate to tRNA(Glu) in a two-step reaction glutamate is first activated by ATP to form Glu-AMP and then transferred to the acceptor end of tRNA(Glu)
J9319_00620	COG1045	serine acetyltransferase
J9319_00625	COG0215	cysteine-tRNA ligase activity
J9319_00630	COG1939	Involved in correct processing of both the 5' and 3' ends of 23S rRNA precursor. Processes 30S rRNA precursor transcript even in absence of ribonuclease 3 (Rnc)
J9319_00635	COG0566	Belongs to the class IV-like SAM-binding methyltransferase superfamily. RNA methyltransferase TrmH family
J9319_00640	COG3688	RNA-binding protein containing a PIN domain
J9319_00645	COG1595	DNA-templated transcription, initiation
J9319_00650	COG0267	Belongs to the bacterial ribosomal protein bL33 family
J9319_00655	COG0690	P-P-bond-hydrolysis-driven protein transmembrane transporter activity
J9319_00660	COG0250	Participates in transcription elongation, termination and antitermination
J9319_00670	COG0081	regulation of translation
J9319_00675	COG0244	Forms part of the ribosomal stalk, playing a central role in the interaction of the ribosome with GTP-bound translation factors
J9319_00680	COG0222	ribosome binding
J9319_00685	COG2813	Specifically methylates the guanine in position
J9319_00690	COG0085	RNA polymerase activity
J9319_00695	COG0086	DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates
J9319_00700	COG1358	cellular component organization or biogenesis
J9319_00705	COG0048	Interacts with and stabilizes bases of the 16S rRNA that are involved in tRNA selection in the A site and with the mRNA backbone. Located at the interface of the 30S and 50S subunits, it traverses the body of the 30S subunit contacting proteins on the other side and probably holding the rRNA structure together. The combined cluster of proteins S8, S12 and S17 appears to hold together the shoulder and platform of the 30S subunit
J9319_00710	COG0049	tRNA binding
J9319_00715	COG0480	Catalyzes the GTP-dependent ribosomal translocation step during translation elongation. During this step, the ribosome changes from the pre-translocational (PRE) to the post- translocational (POST) state as the newly formed A-site-bound peptidyl-tRNA and P-site-bound deacylated tRNA move to the P and E sites, respectively. Catalyzes the coordinated movement of the two tRNA molecules, the mRNA and conformational changes in the ribosome
J9319_00720	COG0050	This protein promotes the GTP-dependent binding of aminoacyl-tRNA to the A-site of ribosomes during protein biosynthesis
J9319_00725	COG0596	Alpha beta hydrolase
J9319_00735	COG0087	One of the primary rRNA binding proteins, it binds directly near the 3'-end of the 23S rRNA, where it nucleates assembly of the 50S subunit
J9319_00740	COG0088	Forms part of the polypeptide exit tunnel
J9319_00745	COG0089	rRNA binding
J9319_00750	COG0090	One of the primary rRNA binding proteins. Required for association of the 30S and 50S subunits to form the 70S ribosome, for tRNA binding and peptide bond formation. It has been suggested to have peptidyltransferase activity
J9319_00755	COG0185	Protein S19 forms a complex with S13 that binds strongly to the 16S ribosomal RNA
J9319_00760	COG0091	The globular domain of the protein is located near the polypeptide exit tunnel on the outside of the subunit, while an extended beta-hairpin is found that lines the wall of the exit tunnel in the center of the 70S ribosome
J9319_00765	COG0092	Binds the lower part of the 30S subunit head. Binds mRNA in the 70S ribosome, positioning it for translation
J9319_00770	COG0197	Binds 23S rRNA and is also seen to make contacts with the A and possibly P site tRNAs
J9319_00775	COG0255	Belongs to the universal ribosomal protein uL29 family
J9319_00780	COG0186	One of the primary rRNA binding proteins, it binds specifically to the 5'-end of 16S ribosomal RNA
J9319_00785	COG0093	Binds to 23S rRNA. Forms part of two intersubunit bridges in the 70S ribosome
J9319_00790	COG0198	One of the proteins that surrounds the polypeptide exit tunnel on the outside of the subunit
J9319_00795	COG0094	This is 1 of the proteins that binds and probably mediates the attachment of the 5S RNA into the large ribosomal subunit, where it forms part of the central protuberance. In the 70S ribosome it contacts protein S13 of the 30S subunit (bridge B1b), connecting the 2 subunits
J9319_00800	COG0199	Binds 16S rRNA, required for the assembly of 30S particles and may also be responsible for determining the conformation of the 16S rRNA at the A site
J9319_00805	COG0096	One of the primary rRNA binding proteins, it binds directly to 16S rRNA central domain where it helps coordinate assembly of the platform of the 30S subunit
J9319_00810	COG0097	This protein binds to the 23S rRNA, and is important in its secondary structure. It is located near the subunit interface in the base of the L7 L12 stalk, and near the tRNA binding site of the peptidyltransferase center
J9319_00815	COG0256	This is one of the proteins that binds and probably mediates the attachment of the 5S RNA into the large ribosomal subunit, where it forms part of the central protuberance
J9319_00820	COG0098	Located at the back of the 30S subunit body where it stabilizes the conformation of the head with respect to the body
J9319_00825	COG1841	ribosomal large subunit assembly
J9319_00830	COG0200	Binds to the 23S rRNA
J9319_00835	COG0201	protein transport
J9319_00840	COG0563	adenylate kinase activity
J9319_00845	COG0024	Methionine aminopeptidase
J9319_00850	COG0361	One of the essential components for the initiation of protein synthesis. Stabilizes the binding of IF-2 and IF-3 on the 30S subunit to which N-formylmethionyl-tRNA(fMet) subsequently binds. Helps modulate mRNA selection, yielding the 30S pre- initiation complex (PIC). Upon addition of the 50S ribosomal subunit IF-1, IF-2 and IF-3 are released leaving the mature 70S translation initation complex
J9319_00855	COG0257	Belongs to the bacterial ribosomal protein bL36 family
J9319_00860	COG0099	Located at the top of the head of the 30S subunit, it contacts several helices of the 16S rRNA. In the 70S ribosome it contacts the 23S rRNA (bridge B1a) and protein L5 of the 50S subunit (bridge B1b), connecting the 2 subunits
J9319_00865	COG0100	Located on the platform of the 30S subunit, it bridges several disparate RNA helices of the 16S rRNA. Forms part of the Shine-Dalgarno cleft in the 70S ribosome
J9319_00870	COG0202	RNA polymerase activity
J9319_00875	COG0203	ribosomal protein L17
J9319_00880	COG1122	ATPase activity
J9319_00885	COG1122	ATPase activity
J9319_00890	COG0619	Transmembrane (T) component of an energy-coupling factor (ECF) ABC-transporter complex. Unlike classic ABC transporters this ECF transporter provides the energy necessary to transport a number of different substrates
J9319_00895	COG0101	tRNA pseudouridine synthase activity
J9319_00900	COG0102	This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly
J9319_00905	COG0103	maturation of SSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)
J9319_00910	COG1670	COG1670 acetyltransferases, including N-acetylases of ribosomal proteins
J9319_00940	COG0860	N-Acetylmuramoyl-L-alanine amidase
J9319_00945	COG0489	protein tyrosine kinase activity
J9319_00955	COG2194	sulfuric ester hydrolase activity
J9319_00960	COG0726	polysaccharide deacetylase
J9319_00990	COG0659	secondary active sulfate transmembrane transporter activity
J9319_00995	COG0385	Bile acid
J9319_01000	COG3876	Protein conserved in bacteria
J9319_01005	COG1472	Belongs to the glycosyl hydrolase 3 family
J9319_01010	COG1680	COG1680 Beta-lactamase class C and other penicillin binding
J9319_01015	COG1264	protein-N(PI)-phosphohistidine-sugar phosphotransferase activity
J9319_01015	COG1263	PTS System
J9319_01020	COG1737	Transcriptional regulator
J9319_01025	COG2103	Specifically catalyzes the cleavage of the D-lactyl ether substituent of MurNAc 6-phosphate, producing GlcNAc 6- phosphate and D-lactate
J9319_01060	COG1595	DNA-templated transcription, initiation
J9319_01065	COG5662	AntiSigma factor
J9319_01070	COG1624	Catalyzes the condensation of 2 ATP molecules into cyclic di-AMP (c-di-AMP), a second messenger used to regulate differing processes in different bacteria
J9319_01075	COG4856	YbbR-like protein
J9319_01080	COG1109	Catalyzes the conversion of glucosamine-6-phosphate to glucosamine-1-phosphate
J9319_01085	COG0449	glutamine-fructose-6-phosphate transaminase (isomerizing) activity
J9319_01100	COG1131	(ABC) transporter
J9319_01110	COG0577	efflux transmembrane transporter activity
J9319_01110	COG1136	(ABC) transporter
J9319_01120	COG1695	Transcriptional regulator
J9319_01130	COG1131	(ABC) transporter
J9319_01140	COG1413	lyase activity
J9319_01145	COG0526	COG0526, thiol-disulfide isomerase and thioredoxins
J9319_01155	COG2311	Membrane
J9319_01175	COG1476	TRANSCRIPTIONal
J9319_01185	COG2021	Transfers an acetyl group from acetyl-CoA to L- homoserine, forming acetyl-L-homoserine
J9319_01190	COG2207	Transcriptional regulator
J9319_01205	COG1131	(ABC) transporter
J9319_01220	COG1113	amino acid transport
J9319_01225	COG0584	glycerophosphoryl diester phosphodiesterase
J9319_01230	COG2271	Major facilitator Superfamily
J9319_01240	COG1331	Highly conserved protein containing a thioredoxin domain
J9319_01245	COG0304	beta-ketoacyl-acyl-carrier-protein synthase II activity
J9319_01260	COG0640	Transcriptional regulator
J9319_01275	COG1937	Protein conserved in bacteria
J9319_01280	COG2210	Belongs to the sulfur carrier protein TusA family
J9319_01290	COG0425	Belongs to the sulfur carrier protein TusA family
J9319_01290	COG0607	Catalyzes the ATP-dependent transfer of a sulfur to tRNA to produce 4-thiouridine in position 8 of tRNAs, which functions as a near-UV photosensor. Also catalyzes the transfer of sulfur to the sulfur carrier protein ThiS, forming ThiS-thiocarboxylate. This is a step in the synthesis of thiazole, in the thiamine biosynthesis pathway. The sulfur is donated as persulfide by IscS
J9319_01295	COG0491	Thiolesterase that catalyzes the hydrolysis of S-D- lactoyl-glutathione to form glutathione and D-lactic acid
J9319_01295	COG0607	Catalyzes the ATP-dependent transfer of a sulfur to tRNA to produce 4-thiouridine in position 8 of tRNAs, which functions as a near-UV photosensor. Also catalyzes the transfer of sulfur to the sulfur carrier protein ThiS, forming ThiS-thiocarboxylate. This is a step in the synthesis of thiazole, in the thiamine biosynthesis pathway. The sulfur is donated as persulfide by IscS
J9319_01300	COG0425	Belongs to the sulfur carrier protein TusA family
J9319_01305	COG0730	response to heat
J9319_01315	COG0441	Catalyzes the attachment of threonine to tRNA(Thr) in a two-step reaction L-threonine is first activated by ATP to form Thr-AMP and then transferred to the acceptor end of tRNA(Thr)
J9319_01320	COG2814	Major facilitator Superfamily
J9319_01335	COG1846	Transcriptional regulator
J9319_01340	COG1683	Conserved Protein
J9319_01345	COG0656	L-ascorbic acid biosynthetic process
J9319_01350	COG0371	Dehydrogenase
J9319_01355	COG1054	Belongs to the UPF0176 family
J9319_01360	COG0531	amino acid
J9319_01370	COG3711	transcriptional antiterminator
J9319_01375	COG2190	(PTS) system
J9319_01375	COG1264	protein-N(PI)-phosphohistidine-sugar phosphotransferase activity
J9319_01375	COG1263	PTS System
J9319_01380	COG2723	6-phospho-beta-galactosidase activity
J9319_01395	COG1762	phosphoenolpyruvate-dependent sugar phosphotransferase system
J9319_01395	COG3711	transcriptional antiterminator
J9319_01400	COG1940	carbohydrate kinase activity
J9319_01405	COG0383	alpha-mannosidase activity
J9319_01410	COG1299	protein-N(PI)-phosphohistidine-fructose phosphotransferase system transporter activity
J9319_01415	COG1445	protein-N(PI)-phosphohistidine-fructose phosphotransferase system transporter activity
J9319_01420	COG1925	phosphoenolpyruvate-dependent sugar phosphotransferase system
J9319_01420	COG4668	phosphoenolpyruvate-dependent sugar phosphotransferase system
J9319_01425	COG1404	Belongs to the peptidase S8 family
J9319_01440	COG0833	amino acid
J9319_01445	COG2040	homocysteine
J9319_01450	COG1284	Uncharacterised 5xTM membrane BCR, YitT family COG1284
J9319_01455	COG1695	Transcriptional regulator
J9319_01470	COG2814	Major facilitator Superfamily
J9319_01475	COG0456	acetyltransferase
J9319_01490	COG1404	Belongs to the peptidase S8 family
J9319_01500	COG1309	transcriptional regulator
J9319_01505	COG1917	Cupin 2, conserved barrel domain protein
J9319_01510	COG1846	Transcriptional regulator
J9319_01515	COG0318	PFAM AMP-dependent synthetase and ligase
J9319_01520	COG0531	amino acid
J9319_01530	COG0596	Alpha beta hydrolase
J9319_01535	COG1115	amino acid carrier protein
J9319_01540	COG2066	Belongs to the glutaminase family
J9319_01545	COG4191	Histidine kinase
J9319_01550	COG0784	Response regulator, receiver
J9319_01555	COG1405	negative regulation of cell septum assembly
J9319_01555	COG3012	SEC-C Motif Domain Protein
J9319_01565	COG0667	Aldo Keto reductase
J9319_01570	COG3290	protein histidine kinase activity
J9319_01575	COG3279	Response regulator of the LytR AlgR family
J9319_01580	COG4555	ABC transporter
J9319_01585	COG1668	transmembrane transport
J9319_01605	COG3773	Cell wall hydrolase
J9319_01610	COG1028	Short-chain dehydrogenase reductase Sdr
J9319_01620	COG2141	COG2141 Coenzyme F420-dependent N5,N10-methylene tetrahydromethanopterin reductase and related flavin-dependent oxidoreductases
J9319_01625	COG2310	stress, protein
J9319_01630	COG2310	stress, protein
J9319_01635	COG2310	stress, protein
J9319_01640	COG0861	Integral membrane protein TerC family
J9319_01670	COG3853	Toxic anion resistance protein (TelA)
J9319_01675	COG0517	IMP dehydrogenase activity
J9319_01675	COG4175	Glycine betaine
J9319_01680	COG4176	ABC-type proline glycine betaine transport system permease component
J9319_01685	COG2113	Glycine betaine
J9319_01700	COG1473	amidohydrolase
J9319_01705	COG1288	antiporter activity
J9319_01710	COG0039	L-malate dehydrogenase activity
J9319_01715	COG1620	l-lactate permease
J9319_01720	COG1609	Transcriptional regulator
J9319_01725	COG0399	UDP-4-amino-4-deoxy-L-arabinose aminotransferase
J9319_01730	COG0561	phosphatase activity
J9319_01735	COG0673	inositol 2-dehydrogenase activity
J9319_01740	COG0738	Major facilitator superfamily
J9319_01745	COG1280	lysine exporter protein (LysE YggA)
J9319_01760	COG3403	YqcI/YcgG family
J9319_01765	COG1113	amino acid transport
J9319_01770	COG3665	Urea carboxylase-associated protein
J9319_01775	COG0171	NAD+ synthase (glutamine-hydrolyzing) activity
J9319_01785	COG1012	belongs to the aldehyde dehydrogenase family
J9319_01790	COG0710	3-dehydroquinate dehydratase activity
J9319_01795	COG0028	Belongs to the TPP enzyme family
J9319_01805	COG1804	L-carnitine dehydratase bile acid-inducible protein F
J9319_01810	COG2271	Major facilitator Superfamily
J9319_01825	COG0703	Catalyzes the specific phosphorylation of the 3-hydroxyl group of shikimic acid using ATP as a cosubstrate
J9319_01830	COG0329	Catalyzes the condensation of (S)-aspartate-beta- semialdehyde (S)-ASA and pyruvate to 4-hydroxy- tetrahydrodipicolinate (HTPA)
J9319_01840	COG0477	Major facilitator Superfamily
J9319_01845	COG2226	methyltransferase
J9319_01850	COG0583	DNA-binding transcription factor activity
J9319_01855	COG0388	Catalyzes the ATP-dependent amidation of deamido-NAD to form NAD. Uses L-glutamine as a nitrogen source
J9319_01860	COG3458	cephalosporin-C deacetylase activity
J9319_01870	COG3541	Predicted nucleotidyltransferase
J9319_01875	COG0506	proline dehydrogenase activity
J9319_01880	COG1012	belongs to the aldehyde dehydrogenase family
J9319_01885	COG2508	Transcriptional regulator
J9319_01890	COG1055	Involved in arsenical resistance. Thought to form the channel of an arsenite pump
J9319_01895	COG0765	amino acid transport
J9319_01900	COG0834	ABC-type amino acid transport signal transduction systems periplasmic component domain
J9319_01910	COG2220	Zn-dependent hydrolases of the beta-lactamase fold
J9319_01915	COG1522	sequence-specific DNA binding
J9319_01920	COG2746	aminoglycoside 3-N-acetyltransferase activity
J9319_01930	COG0840	transmembrane signaling receptor activity
J9319_01930	COG3290	protein histidine kinase activity
J9319_01935	COG3209	COG3209 Rhs family protein
J9319_01955	COG3842	ATPase activity
J9319_01960	COG1176	ABC-type spermidine putrescine transport system, permease component I
J9319_01970	COG1020	D-alanine [D-alanyl carrier protein] ligase activity
J9319_01975	COG1020	D-alanine [D-alanyl carrier protein] ligase activity
J9319_01980	COG1020	D-alanine [D-alanyl carrier protein] ligase activity
J9319_01995	COG3208	Thioesterase involved in non-ribosomal peptide biosynthesis
J9319_02000	COG0697	spore germination
J9319_02005	COG1167	Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain MocR family and their eukaryotic orthologs
J9319_02015	COG2207	Transcriptional regulator
J9319_02015	COG3708	Transcriptional regulator
J9319_02025	COG2364	Membrane
J9319_02030	COG1126	abc transporter atp-binding protein
J9319_02035	COG0765	amino acid transport
J9319_02040	COG0834	ABC-type amino acid transport signal transduction systems periplasmic component domain
J9319_02045	COG0412	Dienelactone hydrolase
J9319_02050	COG0833	amino acid
J9319_02055	COG3104	oligopeptide transport
J9319_02060	COG5434	Belongs to the glycosyl hydrolase 28 family
J9319_02065	COG2141	COG2141 Coenzyme F420-dependent N5,N10-methylene tetrahydromethanopterin reductase and related flavin-dependent oxidoreductases
J9319_02070	COG0456	acetyltransferase
J9319_02075	COG0834	ABC-type amino acid transport signal transduction systems periplasmic component domain
J9319_02080	COG0765	amino acid transport
J9319_02085	COG1126	abc transporter atp-binding protein
J9319_02090	COG1473	amidohydrolase
J9319_02095	COG2079	MmgE PrpD family protein
J9319_02100	COG0745	RESPONSE REGULATOR receiver
J9319_02105	COG5002	protein histidine kinase activity
J9319_02105	COG3850	Histidine kinase
J9319_02110	COG1366	Belongs to the anti-sigma-factor antagonist family
J9319_02115	COG0527	aspartate kinase activity
J9319_02120	COG2814	Major facilitator Superfamily
J9319_02125	COG1309	transcriptional regulator
J9319_02130	COG0640	Transcriptional regulator
J9319_02140	COG0583	DNA-binding transcription factor activity
J9319_02145	COG1167	Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain MocR family and their eukaryotic orthologs
J9319_02150	COG0160	Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family
J9319_02155	COG0531	amino acid
J9319_02160	COG1012	belongs to the aldehyde dehydrogenase family
J9319_02165	COG2249	NAD(P)H dehydrogenase (quinone) activity
J9319_02170	COG4549	nuclear export factor GLE1
J9319_02175	COG2372	response to copper ion
J9319_02175	COG1276	copper resistance
J9319_02180	COG2213	PTS system mannitol-specific
J9319_02185	COG4668	phosphoenolpyruvate-dependent sugar phosphotransferase system
J9319_02190	COG0246	Mannitol dehydrogenase
J9319_02195	COG0840	transmembrane signaling receptor activity
J9319_02230	COG0346	lactoylglutathione lyase activity
J9319_02240	COG0561	phosphatase activity
J9319_02245	COG1540	5-oxoprolinase (ATP-hydrolyzing) activity
J9319_02250	COG1914	H( )-stimulated, divalent metal cation uptake system
J9319_02255	COG4336	lyase activity
J9319_02260	COG2049	5-oxoprolinase (ATP-hydrolyzing) activity
J9319_02265	COG1984	allophanate hydrolase subunit 2
J9319_02270	COG1414	Transcriptional regulator
J9319_02275	COG1182	Catalyzes the reductive cleavage of azo bond in aromatic azo compounds to the corresponding amines. Requires NADH, but not NADPH, as an electron donor for its activity
J9319_02280	COG2755	lipolytic protein G-D-S-L family
J9319_02290	COG3711	transcriptional antiterminator
J9319_02295	COG2226	methyltransferase
J9319_02300	COG1028	Short-chain dehydrogenase reductase Sdr
J9319_02305	COG3871	stress protein (general stress protein 26)
J9319_02325	COG2814	Major facilitator Superfamily
J9319_02335	COG0550	Releases the supercoiling and torsional tension of DNA, which is introduced during the DNA replication and transcription, by transiently cleaving and rejoining one strand of the DNA duplex. Introduces a single-strand break via transesterification at a target site in duplex DNA. The scissile phosphodiester is attacked by the catalytic tyrosine of the enzyme, resulting in the formation of a DNA-(5'-phosphotyrosyl)-enzyme intermediate and the expulsion of a 3'-OH DNA strand. The free DNA strand then undergoes passage around the unbroken strand, thus removing DNA supercoils. Finally, in the religation step, the DNA 3'-OH attacks the covalent intermediate to expel the active-site tyrosine and restore the DNA phosphodiester backbone
J9319_02335	COG0551	DNA topoisomerase type I activity
J9319_02340	COG3405	Belongs to the glycosyl hydrolase 8 (cellulase D) family
J9319_02345	COG3706	GGDEF domain
J9319_02350	COG5298	Protein conserved in bacteria
J9319_02355	COG1215	transferase activity, transferring glycosyl groups
J9319_02365	COG0531	amino acid
J9319_02370	COG0028	Belongs to the TPP enzyme family
J9319_02375	COG5444	nuclease activity
J9319_02395	COG1670	COG1670 acetyltransferases, including N-acetylases of ribosomal proteins
J9319_02400	COG1914	H( )-stimulated, divalent metal cation uptake system
J9319_02405	COG2261	transglycosylase associated protein
J9319_02410	COG2217	Heavy metal translocating P-type atpase
J9319_02415	COG1638	TRAP-type C4-dicarboxylate transport system periplasmic component
J9319_02420	COG3290	protein histidine kinase activity
J9319_02425	COG4565	transcriptional regulatory protein
J9319_02430	COG1301	dicarboxylic acid transport
J9319_02435	COG0628	permease
J9319_02440	COG1301	dicarboxylic acid transport
J9319_02445	COG1131	(ABC) transporter
J9319_02450	COG1277	ABC-type transport system involved in multi-copper enzyme maturation permease component
J9319_02465	COG0526	COG0526, thiol-disulfide isomerase and thioredoxins
J9319_02470	COG1181	Belongs to the D-alanine--D-alanine ligase family
J9319_02475	COG0770	UDP-N-acetylmuramoyl-tripeptide-D-alanyl-D-alanine ligase activity
J9319_02490	COG0513	Belongs to the DEAD box helicase family
J9319_02495	COG3402	PFAM membrane-flanked domain
J9319_02500	COG3428	Bacterial PH domain
J9319_02505	COG0705	Rhomboid family
J9319_02510	COG0736	holo-[acyl-carrier-protein] synthase activity
J9319_02515	COG2834	Participates in the translocation of lipoproteins from the inner membrane to the outer membrane. Only forms a complex with a lipoprotein if the residue after the N-terminal Cys is not an aspartate (The Asp acts as a targeting signal to indicate that the lipoprotein should stay in the inner membrane)
J9319_02520	COG0787	Catalyzes the interconversion of L-alanine and D- alanine. May also act on other amino acids
J9319_02525	COG0864	Transcriptional regulator
J9319_02530	COG2337	Toxic component of a toxin-antitoxin (TA) module
J9319_02535	COG1366	Belongs to the anti-sigma-factor antagonist family
J9319_02540	COG1366	Belongs to the anti-sigma-factor antagonist family
J9319_02545	COG2172	sigma factor antagonist activity
J9319_02550	COG2208	phosphoserine phosphatase activity
J9319_02555	COG1366	Belongs to the anti-sigma-factor antagonist family
J9319_02560	COG2172	sigma factor antagonist activity
J9319_02565	COG1191	sigma factor activity
J9319_02570	COG2208	phosphoserine phosphatase activity
J9319_02575	COG2183	response to ionizing radiation
J9319_02585	COG3091	SprT-like family
J9319_02645	COG1278	Cold shock
J9319_02650	COG1329	Transcriptional regulator
J9319_02655	COG1064	alcohol dehydrogenase
J9319_02660	COG0789	Transcriptional regulator
J9319_02680	COG0477	Major facilitator Superfamily
J9319_02685	COG0657	acetylesterase activity
J9319_02695	COG4221	oxidoreductase activity
J9319_02705	COG0252	asparaginase activity
J9319_02725	COG2814	Major facilitator Superfamily
J9319_02730	COG3936	Protein involved in polysaccharide intercellular adhesin (PIA) synthesis biofilm formation
J9319_02735	COG2409	Drug exporters of the RND superfamily
J9319_02740	COG4585	Histidine kinase
J9319_02745	COG2197	response regulator
J9319_02790	COG1309	transcriptional regulator
J9319_02795	COG0262	Key enzyme in folate metabolism. Catalyzes an essential reaction for de novo glycine and purine synthesis, and for DNA precursor synthesis
J9319_02800	COG1846	Transcriptional regulator
J9319_02805	COG0778	Nitroreductase
J9319_02820	COG1396	sequence-specific DNA binding
J9319_02830	COG0456	acetyltransferase
J9319_02840	COG4122	O-methyltransferase activity
J9319_02850	COG1296	Branched-chain amino acid permease (Azaleucine resistance)
J9319_02855	COG0697	spore germination
J9319_02865	COG1301	dicarboxylic acid transport
J9319_02905	COG0611	Catalyzes the ATP-dependent phosphorylation of thiamine- monophosphate (TMP) to form thiamine-pyrophosphate (TPP), the active form of vitamin B1
J9319_02910	COG0802	atpase or kinase
J9319_02915	COG1214	PFAM Peptidase M22, glycoprotease
J9319_02920	COG0456	acetyltransferase
J9319_02925	COG0533	Required for the formation of a threonylcarbamoyl group on adenosine at position 37 (t(6)A37) in tRNAs that read codons beginning with adenine. Is involved in the transfer of the threonylcarbamoyl moiety of threonylcarbamoyl-AMP (TC-AMP) to the N6 group of A37, together with TsaE and TsaB. TsaD likely plays a direct catalytic role in this reaction
J9319_02930	COG0488	(ABC) transporter
J9319_02935	COG0315	cyclic pyranopterin monophosphate synthase activity
J9319_02940	COG2344	Modulates transcription in response to changes in cellular NADH NAD( ) redox state
J9319_02945	COG1826	Part of the twin-arginine translocation (Tat) system that transports large folded proteins containing a characteristic twin-arginine motif in their signal peptide across membranes
J9319_02950	COG0805	protein transport
J9319_02965	COG1266	CAAX protease self-immunity
J9319_02970	COG0234	Binds to Cpn60 in the presence of Mg-ATP and suppresses the ATPase activity of the latter
J9319_02975	COG0459	protein refolding
J9319_02980	COG1846	Transcriptional regulator
J9319_02985	COG2808	Putative FMN-binding domain
J9319_02990	COG1876	peptidase activity
J9319_03015	COG0797	Lytic transglycosylase with a strong preference for naked glycan strands that lack stem peptides
J9319_03020	COG0823	Involved in the tonB-independent uptake of proteins
J9319_03030	COG2132	Multicopper oxidase
J9319_03035	COG1113	amino acid transport
J9319_03040	COG0053	Belongs to the cation diffusion facilitator (CDF) transporter (TC 2.A.4) family
J9319_03045	COG0714	Associated with various cellular activities
J9319_03050	COG1721	protein (some members contain a von Willebrand factor type A (vWA) domain
J9319_03055	COG1305	Transglutaminase-like
J9319_03060	COG0518	GMP synthase (glutamine-hydrolyzing) activity
J9319_03060	COG0519	Catalyzes the synthesis of GMP from XMP
J9319_03070	COG2606	Belongs to the prolyl-tRNA editing family. YbaK EbsC subfamily
J9319_03075	COG2207	Transcriptional regulator
J9319_03075	COG1917	Cupin 2, conserved barrel domain protein
J9319_03080	COG0119	Catalyzes the condensation of the acetyl group of acetyl-CoA with 3-methyl-2-oxobutanoate (2-oxoisovalerate) to form 3-carboxy-3-hydroxy-4-methylpentanoate (2-isopropylmalate)
J9319_03110	COG3279	Response regulator of the LytR AlgR family
J9319_03125	COG1595	DNA-templated transcription, initiation
J9319_03135	COG2814	Major facilitator Superfamily
J9319_03140	COG0583	DNA-binding transcription factor activity
J9319_03145	COG2252	PERMEase
J9319_03155	COG5583	Uncharacterized small protein (DUF2292)
J9319_03160	COG3064	Membrane
J9319_03165	COG4843	Uncharacterized protein conserved in bacteria (DUF2179)
J9319_03175	COG0041	Catalyzes the conversion of N5-carboxyaminoimidazole ribonucleotide (N5-CAIR) to 4-carboxy-5-aminoimidazole ribonucleotide (CAIR)
J9319_03180	COG0026	Catalyzes the ATP-dependent conversion of 5- aminoimidazole ribonucleotide (AIR) and HCO(3)(-) to N5- carboxyaminoimidazole ribonucleotide (N5-CAIR)
J9319_03185	COG0015	Belongs to the lyase 1 family. Adenylosuccinate lyase subfamily
J9319_03190	COG0152	phosphoribosylaminoimidazolesuccinocarboxamide synthase activity
J9319_03195	COG1828	Part of the phosphoribosylformylglycinamidine synthase complex involved in the purines biosynthetic pathway. Catalyzes the ATP-dependent conversion of formylglycinamide ribonucleotide (FGAR) and glutamine to yield formylglycinamidine ribonucleotide (FGAM) and glutamate. The FGAM synthase complex is composed of three subunits. PurQ produces an ammonia molecule by converting glutamine to glutamate. PurL transfers the ammonia molecule to FGAR to form FGAM in an ATP-dependent manner. PurS interacts with PurQ and PurL and is thought to assist in the transfer of the ammonia molecule from PurQ to PurL
J9319_03200	COG0047	phosphoribosylformylglycinamidine synthase activity
J9319_03205	COG0046	Part of the phosphoribosylformylglycinamidine synthase complex involved in the purines biosynthetic pathway. Catalyzes the ATP-dependent conversion of formylglycinamide ribonucleotide (FGAR) and glutamine to yield formylglycinamidine ribonucleotide (FGAM) and glutamate. The FGAM synthase complex is composed of three subunits. PurQ produces an ammonia molecule by converting glutamine to glutamate. PurL transfers the ammonia molecule to FGAR to form FGAM in an ATP-dependent manner. PurS interacts with PurQ and PurL and is thought to assist in the transfer of the ammonia molecule from PurQ to PurL
J9319_03210	COG0034	Catalyzes the formation of phosphoribosylamine from phosphoribosylpyrophosphate (PRPP) and glutamine
J9319_03215	COG0150	phosphoribosylformylglycinamidine cyclo-ligase activity
J9319_03220	COG0299	Catalyzes the transfer of a formyl group from 10- formyltetrahydrofolate to 5-phospho-ribosyl-glycinamide (GAR), producing 5-phospho-ribosyl-N-formylglycinamide (FGAR) and tetrahydrofolate
J9319_03225	COG0138	bifunctional purine biosynthesis protein purh
J9319_03230	COG0151	Belongs to the GarS family
J9319_03250	COG0161	adenosylmethionine-8-amino-7-oxononanoate transaminase activity
J9319_03255	COG1788	Acyl CoA acetate 3-ketoacid CoA transferase, alpha subunit
J9319_03260	COG2057	Acyl CoA acetate 3-ketoacid CoA transferase beta subunit
J9319_03265	COG0624	Catalyzes the hydrolysis of N-succinyl-L,L- diaminopimelic acid (SDAP), forming succinate and LL-2,6- diaminoheptanedioate (DAP), an intermediate involved in the bacterial biosynthesis of lysine and meso-diaminopimelic acid, an essential component of bacterial cell walls
J9319_03275	COG1001	Belongs to the metallo-dependent hydrolases superfamily. Adenine deaminase family
J9319_03280	COG4496	protein, YerC YecD
J9319_03290	COG0069	glutamate synthase activity
J9319_03305	COG1646	35 carbon atoms) to the C3 hydroxyl of sn-glycerol-1-phosphate (G1P), producing heptaprenylglyceryl phosphate (HepGP). This reaction is an ether-bond-formation step in the biosynthesis of archaea-type G1P-based membrane lipids found in Bacillales
J9319_03310	COG0210	DNA helicase
J9319_03315	COG0272	DNA ligase that catalyzes the formation of phosphodiester linkages between 5'-phosphoryl and 3'-hydroxyl groups in double-stranded DNA using NAD as a coenzyme and as the energy source for the reaction. It is essential for DNA replication and repair of damaged DNA
J9319_03320	COG4851	CamS sex pheromone cAM373 precursor
J9319_03325	COG2334	A protein kinase that phosphorylates Ser and Thr residues. Probably acts to suppress the effects of stress linked to accumulation of reactive oxygen species. Probably involved in the extracytoplasmic stress response
J9319_03330	COG1285	pathogenesis
J9319_03335	COG0591	Belongs to the sodium solute symporter (SSF) (TC 2.A.21) family
J9319_03340	COG0721	Allows the formation of correctly charged Asn-tRNA(Asn) or Gln-tRNA(Gln) through the transamidation of misacylated Asp- tRNA(Asn) or Glu-tRNA(Gln) in organisms which lack either or both of asparaginyl-tRNA or glutaminyl-tRNA synthetases. The reaction takes place in the presence of glutamine and ATP through an activated phospho-Asp-tRNA(Asn) or phospho-Glu-tRNA(Gln)
J9319_03345	COG0154	amidase activity
J9319_03350	COG0064	Allows the formation of correctly charged Asn-tRNA(Asn) or Gln-tRNA(Gln) through the transamidation of misacylated Asp- tRNA(Asn) or Glu-tRNA(Gln) in organisms which lack either or both of asparaginyl-tRNA or glutaminyl-tRNA synthetases. The reaction takes place in the presence of glutamine and ATP through an activated phospho-Asp-tRNA(Asn) or phospho-Glu-tRNA(Gln)
J9319_03355	COG1309	transcriptional regulator
J9319_03360	COG0841	Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family
J9319_03370	COG1957	nucleoside hydrolase
J9319_03375	COG1597	lipid kinase activity
J9319_03380	COG2265	Belongs to the class I-like SAM-binding methyltransferase superfamily. RNA M5U methyltransferase family
J9319_03440	COG0042	Catalyzes the synthesis of 5,6-dihydrouridine (D), a modified base found in the D-loop of most tRNAs, via the reduction of the C5-C6 double bond in target uridines
J9319_03455	COG1959	2 iron, 2 sulfur cluster binding
J9319_03460	COG0492	ferredoxin-NADP+ reductase activity
J9319_03475	COG1486	melibiose metabolic process
J9319_03515	COG1208	COG1208 Nucleoside-diphosphate-sugar pyrophosphorylase involved in lipopolysaccharide biosynthesis translation initiation factor 2B, gamma epsilon subunits eIF-2Bgamma eIF-2Bepsilon
J9319_03520	COG0451	ADP-glyceromanno-heptose 6-epimerase activity
J9319_03525	COG1442	glycosyl transferase family 8
J9319_03530	COG1216	Glycosyl transferase, family 2
J9319_03535	COG1442	glycosyl transferase family 8
J9319_03540	COG2223	nitrite transmembrane transporter activity
J9319_03550	COG0471	metal ion transport
J9319_03565	COG0071	Belongs to the small heat shock protein (HSP20) family
J9319_03580	COG0531	amino acid
J9319_03585	COG0457	Tetratricopeptide repeat
J9319_03585	COG0463	Glycosyl transferase, family 2
J9319_03590	COG0488	(ABC) transporter
J9319_03595	COG1469	GTP cyclohydrolase I activity
J9319_03600	COG0789	Transcriptional regulator
J9319_03605	COG2814	Major facilitator Superfamily
J9319_03610	COG0488	(ABC) transporter
J9319_03615	COG0513	Belongs to the DEAD box helicase family
J9319_03620	COG2130	NADP-dependent
J9319_03640	COG0807	Catalyzes the conversion of D-ribulose 5-phosphate to formate and 3,4-dihydroxy-2-butanone 4-phosphate
J9319_03640	COG0108	Catalyzes the conversion of D-ribulose 5-phosphate to formate and 3,4-dihydroxy-2-butanone 4-phosphate
J9319_03645	COG1262	PFAM Formylglycine-generating sulfatase enzyme
J9319_03655	COG0117	Converts 2,5-diamino-6-(ribosylamino)-4(3h)-pyrimidinone 5'-phosphate into 5-amino-6-(ribosylamino)-2,4(1h,3h)- pyrimidinedione 5'-phosphate
J9319_03655	COG1985	Converts 2,5-diamino-6-(ribosylamino)-4(3h)-pyrimidinone 5'-phosphate into 5-amino-6-(ribosylamino)-2,4(1h,3h)- pyrimidinedione 5'-phosphate
J9319_03665	COG3290	protein histidine kinase activity
J9319_03670	COG4565	transcriptional regulatory protein
J9319_03675	COG3181	Tripartite tricarboxylate transporter family receptor
J9319_03680	COG2851	Citrate transporter
J9319_03690	COG3479	Phenolic acid decarboxylase
J9319_03695	COG1695	Transcriptional regulator
J9319_03700	COG4362	Belongs to the NOS family. Bacterial NOS oxygenase subfamily
J9319_03710	COG1254	Belongs to the acylphosphatase family
J9319_03715	COG2258	MOSC domain
J9319_03730	COG0024	Methionine aminopeptidase
J9319_03735	COG1263	PTS System
J9319_03735	COG1264	protein-N(PI)-phosphohistidine-sugar phosphotransferase activity
J9319_03740	COG3739	integral membrane protein
J9319_03755	COG1368	sulfuric ester hydrolase activity
J9319_03760	COG0076	glutamate decarboxylase activity
J9319_03775	COG1264	protein-N(PI)-phosphohistidine-sugar phosphotransferase activity
J9319_03775	COG1263	PTS System
J9319_03780	COG0366	Alpha amylase catalytic
J9319_03785	COG2188	Transcriptional regulator
J9319_03795	COG0737	Belongs to the 5'-nucleotidase family
J9319_03800	COG0693	protein deglycase activity
J9319_03805	COG4840	Belongs to the UPF0435 family
J9319_03810	COG1115	amino acid carrier protein
J9319_03815	COG0394	Belongs to the low molecular weight phosphotyrosine protein phosphatase family
J9319_03820	COG4980	gas vesicle protein
J9319_03825	COG1295	ribonuclease BN
J9319_03835	COG0477	Major facilitator Superfamily
J9319_03845	COG0387	Pfam Sodium calcium exchanger
J9319_03855	COG0217	transcriptional regulatory protein
J9319_03865	COG0668	transmembrane transport
J9319_03870	COG0535	radical SAM domain protein
J9319_03880	COG0726	polysaccharide deacetylase
J9319_03890	COG0598	Magnesium transport protein CorA
J9319_03900	COG0122	3-methyladenine DNA glycosylase 8-oxoguanine DNA glycosylase
J9319_03905	COG2265	Belongs to the class I-like SAM-binding methyltransferase superfamily. RNA M5U methyltransferase family
J9319_03920	COG0583	DNA-binding transcription factor activity
J9319_03925	COG1942	4-Oxalocrotonate Tautomerase
J9319_03930	COG0599	Antioxidant protein with alkyl hydroperoxidase activity. Required for the reduction of the AhpC active site cysteine residues and for the regeneration of the AhpC enzyme activity
J9319_03935	COG0789	Transcriptional regulator
J9319_03940	COG2814	Major facilitator Superfamily
J9319_03955	COG0441	Catalyzes the attachment of threonine to tRNA(Thr) in a two-step reaction L-threonine is first activated by ATP to form Thr-AMP and then transferred to the acceptor end of tRNA(Thr)
J9319_04000	COG2076	Multidrug Resistance protein
J9319_04005	COG2076	Multidrug Resistance protein
J9319_04010	COG1309	transcriptional regulator
J9319_04020	COG4637	Psort location Cytoplasmic, score
J9319_04025	COG2755	lipolytic protein G-D-S-L family
J9319_04030	COG0492	ferredoxin-NADP+ reductase activity
J9319_04035	COG2169	Transcriptional regulator
J9319_04040	COG4594	ABC-type Fe3 -citrate transport system, periplasmic component
J9319_04045	COG1132	(ABC) transporter
J9319_04050	COG1742	UPF0060 membrane protein
J9319_04055	COG1595	DNA-templated transcription, initiation
J9319_04075	COG2318	DinB family
J9319_04085	COG1846	Transcriptional regulator
J9319_04090	COG0392	lysyltransferase activity
J9319_04090	COG2898	Catalyzes the transfer of a lysyl group from L-lysyl- tRNA(Lys) to membrane-bound phosphatidylglycerol (PG), which produces lysylphosphatidylglycerol (LPG), a major component of the bacterial membrane with a positive net charge. LPG synthesis contributes to bacterial virulence as it is involved in the resistance mechanism against cationic antimicrobial peptides (CAMP) produces by the host's immune system (defensins, cathelicidins) and by the competing microorganisms
J9319_04110	COG0778	Nitroreductase
J9319_04125	COG1090	epimerase
J9319_04130	COG2137	regulation of response to DNA damage stimulus
J9319_04155	COG0463	Glycosyl transferase, family 2
J9319_04160	COG4485	Bacterial membrane protein, YfhO
J9319_04165	COG0654	COG0654 2-polyprenyl-6-methoxyphenol hydroxylase and related FAD-dependent oxidoreductases
J9319_04180	COG2140	Oxalate decarboxylase
J9319_04190	COG1191	sigma factor activity
J9319_04200	COG1988	membrane-bound metal-dependent
J9319_04205	COG1194	a g-specific adenine glycosylase
J9319_04215	COG1028	Short-chain dehydrogenase reductase Sdr
J9319_04230	COG3557	Belongs to the UPF0374 family
J9319_04235	COG1132	(ABC) transporter
J9319_04240	COG0444	Belongs to the ABC transporter superfamily
J9319_04245	COG4608	Belongs to the ABC transporter superfamily
J9319_04250	COG0747	negative chemotaxis
J9319_04255	COG0601	transmembrane transport
J9319_04260	COG1173	ABC-type dipeptide oligopeptide nickel transport systems, permease components
J9319_04265	COG4129	membrane
J9319_04270	COG0001	glutamate-1-semialdehyde 2,1-aminomutase activity
J9319_04275	COG1225	Alkyl hydroperoxide reductase Thiol specific antioxidant Mal allergen
J9319_04280	COG0735	belongs to the Fur family
J9319_04430	COG1368	sulfuric ester hydrolase activity
J9319_04435	COG0681	Belongs to the peptidase S26 family
J9319_04440	COG2873	o-acetylhomoserine
J9319_04450	COG1116	anion transmembrane transporter activity
J9319_04455	COG0715	COG0715 ABC-type nitrate sulfonate bicarbonate transport systems periplasmic components
J9319_04460	COG0600	ABC-type nitrate sulfonate bicarbonate transport system permease component
J9319_04465	COG2141	COG2141 Coenzyme F420-dependent N5,N10-methylene tetrahydromethanopterin reductase and related flavin-dependent oxidoreductases
J9319_04480	COG1131	(ABC) transporter
J9319_04510	COG3382	B3 4 domain protein
J9319_04515	COG1600	Catalyzes the conversion of epoxyqueuosine (oQ) to queuosine (Q), which is a hypermodified base found in the wobble positions of tRNA(Asp), tRNA(Asn), tRNA(His) and tRNA(Tyr)
J9319_04525	COG0219	Methylates the ribose at the nucleotide 34 wobble position in the two leucyl isoacceptors tRNA(Leu)(CmAA) and tRNA(Leu)(cmnm5UmAA). Catalyzes the methyl transfer from S- adenosyl-L-methionine to the 2'-OH of the wobble nucleotide
J9319_04530	COG2766	serine protein kinase
J9319_04535	COG2718	Belongs to the UPF0229 family
J9319_04540	COG1566	PFAM secretion protein HlyD family protein
J9319_04545	COG2814	Major facilitator Superfamily
J9319_04550	COG0655	NAD(P)H dehydrogenase (quinone) activity
J9319_04560	COG1278	Cold shock
J9319_04565	COG3706	GGDEF domain
J9319_04590	COG5577	PFAM Coat F domain
J9319_04595	COG5002	protein histidine kinase activity
J9319_04600	COG1525	nuclease
J9319_04600	COG4085	toxin activity
J9319_04600	COG0737	Belongs to the 5'-nucleotidase family
J9319_04605	COG3764	Sortase (surface protein transpeptidase)
J9319_04610	COG0564	pseudouridine synthase activity
J9319_04620	COG0637	HAD-superfamily hydrolase subfamily IA, variant 3
J9319_04625	COG3153	acetyltransferase
J9319_04625	COG0388	Catalyzes the ATP-dependent amidation of deamido-NAD to form NAD. Uses L-glutamine as a nitrogen source
J9319_04645	COG3835	regulator
J9319_04650	COG0161	adenosylmethionine-8-amino-7-oxononanoate transaminase activity
J9319_04655	COG1954	Regulates expression of the glpD operon. In the presence of glycerol 3-phosphate (G3P) causes antitermination of transcription of glpD at the inverted repeat of the leader region to enhance its transcription. Binds and stabilizes glpD leader mRNA
J9319_04660	COG0580	Belongs to the MIP aquaporin (TC 1.A.8) family
J9319_04665	COG0554	Key enzyme in the regulation of glycerol uptake and metabolism. Catalyzes the phosphorylation of glycerol to yield sn- glycerol 3-phosphate
J9319_04670	COG0578	Belongs to the FAD-dependent glycerol-3-phosphate dehydrogenase family
J9319_04675	COG1109	Catalyzes the conversion of glucosamine-6-phosphate to glucosamine-1-phosphate
J9319_04680	COG2203	Gaf domain
J9319_04680	COG4585	Histidine kinase
J9319_04685	COG2197	response regulator
J9319_04700	COG0753	catalase activity
J9319_04705	COG1959	2 iron, 2 sulfur cluster binding
J9319_04710	COG1018	Is involved in NO detoxification in an aerobic process, termed nitric oxide dioxygenase (NOD) reaction that utilizes O(2) and NAD(P)H to convert NO to nitrate, which protects the bacterium from various noxious nitrogen compounds. Therefore, plays a central role in the inducible response to nitrosative stress
J9319_04710	COG1017	nitric oxide dioxygenase activity
J9319_04715	COG2719	SpoVR family
J9319_04720	COG1785	Belongs to the alkaline phosphatase family
J9319_04725	COG0791	NLP P60 protein
J9319_04725	COG1388	LysM domain
J9319_04730	COG0531	amino acid
J9319_04745	COG1595	DNA-templated transcription, initiation
J9319_04750	COG0204	Acyl-transferase
J9319_04755	COG1253	flavin adenine dinucleotide binding
J9319_04760	COG0789	Transcriptional regulator
J9319_04765	COG1253	flavin adenine dinucleotide binding
J9319_04780	COG0239	Important for reducing fluoride concentration in the cell, thus reducing its toxicity
J9319_04785	COG0584	glycerophosphoryl diester phosphodiesterase
J9319_04795	COG0668	transmembrane transport
J9319_04800	COG0846	NAD-dependent lysine deacetylase and desuccinylase that specifically removes acetyl and succinyl groups on target proteins. Modulates the activities of several proteins which are inactive in their acylated form
J9319_04805	COG0726	polysaccharide deacetylase
J9319_04810	COG0115	Belongs to the class-IV pyridoxal-phosphate-dependent aminotransferase family
J9319_04815	COG0589	response to stress
J9319_04820	COG1132	(ABC) transporter
J9319_04825	COG1132	(ABC) transporter
J9319_04835	COG0702	epimerase
J9319_04845	COG3842	ATPase activity
J9319_04850	COG2508	Transcriptional regulator
J9319_04860	COG0189	ligase activity
J9319_04865	COG0189	ligase activity
J9319_04870	COG4399	Belongs to the UPF0754 family
J9319_04875	COG3679	Belongs to the UPF0342 family
J9319_04880	COG0561	phosphatase activity
J9319_04885	COG0635	Involved in the biosynthesis of porphyrin-containing compound
J9319_04895	COG0475	glutathione-regulated potassium exporter activity
J9319_04900	COG0490	domain, Protein
J9319_04910	COG1024	Enoyl-CoA hydratase
J9319_04920	COG0420	3'-5' exonuclease activity
J9319_04925	COG4717	serine-type aminopeptidase activity
J9319_04930	COG3481	metal-dependent phosphohydrolase, HD sub domain
J9319_04940	COG0760	Chaperone involved in the correct folding and assembly of outer membrane proteins. Recognizes specific patterns of aromatic residues and the orientation of their side chains, which are found more frequently in integral outer membrane proteins. May act in both early periplasmic and late outer membrane-associated steps of protein maturation
J9319_04965	COG1846	Transcriptional regulator
J9319_04970	COG4980	gas vesicle protein
J9319_04985	COG1932	Catalyzes the reversible conversion of 3- phosphohydroxypyruvate to phosphoserine and of 3-hydroxy-2-oxo-4- phosphonooxybutanoate to phosphohydroxythreonine
J9319_04990	COG0537	adenosine 5'-monophosphoramidase activity
J9319_04995	COG1131	(ABC) transporter
J9319_05000	COG4473	ABC transporter
J9319_05010	COG1473	amidohydrolase
J9319_05020	COG2329	Antibiotic biosynthesis monooxygenase
J9319_05025	COG0744	Peptidoglycan polymerase that catalyzes glycan chain elongation from lipid-linked precursors
J9319_05030	COG0407	Catalyzes the decarboxylation of four acetate groups of uroporphyrinogen-III to yield coproporphyrinogen-III
J9319_05035	COG0276	Catalyzes the ferrous insertion into protoporphyrin IX
J9319_05040	COG1232	Catalyzes the 6-electron oxidation of protoporphyrinogen-IX to form protoporphyrin-IX
J9319_05045	COG1309	transcriptional regulator
J9319_05050	COG1511	domain protein
J9319_05055	COG1363	Peptidase, m42
J9319_05060	COG1301	dicarboxylic acid transport
J9319_05070	COG1234	tRNA 3'-trailer cleavage
J9319_05075	COG0095	Lipoate-protein ligase
J9319_05080	COG0318	PFAM AMP-dependent synthetase and ligase
J9319_05090	COG0501	Belongs to the peptidase M48B family
J9319_05095	COG1404	Belongs to the peptidase S8 family
J9319_05100	COG0406	alpha-ribazole phosphatase activity
J9319_05105	COG0840	transmembrane signaling receptor activity
J9319_05110	COG0723	plastoquinol--plastocyanin reductase activity
J9319_05110	COG0665	tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase activity
J9319_05115	COG1028	Short-chain dehydrogenase reductase Sdr
J9319_05125	COG4903	ComK protein
J9319_05140	COG1167	Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain MocR family and their eukaryotic orthologs
J9319_05145	COG2814	Major facilitator Superfamily
J9319_05150	COG2732	(Barnase) inhibitor
J9319_05155	COG4606	Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily
J9319_05160	COG4605	iron ion homeostasis
J9319_05165	COG4604	ABC transporter, ATP-binding protein
J9319_05170	COG4607	ABC-type enterochelin transport system periplasmic component
J9319_05175	COG1316	TRANSCRIPTIONal
J9319_05190	COG0398	Pfam SNARE associated Golgi protein
J9319_05195	COG0681	Belongs to the peptidase S26 family
J9319_05200	COG3180	Ammonia monooxygenase
J9319_05215	COG2259	Doxx family
J9319_05220	COG1633	Catalyzes the formation of the isocyclic ring in chlorophyll biosynthesis. Mediates the cyclase reaction, which results in the formation of divinylprotochlorophyllide (Pchlide) characteristic of all chlorophylls from magnesium-protoporphyrin IX 13-monomethyl ester (MgPMME)
J9319_05225	COG3857	The heterodimer acts as both an ATP-dependent DNA helicase and an ATP-dependent, dual-direction single-stranded exonuclease. Recognizes the chi site generating a DNA molecule suitable for the initiation of homologous recombination
J9319_05230	COG1074	ATP-dependent DNA helicase activity
J9319_05235	COG0420	3'-5' exonuclease activity
J9319_05240	COG0419	ATPase involved in DNA repair
J9319_05245	COG1403	HNH endonuclease
J9319_05285	COG5337	Spore coat protein CotH
J9319_05295	COG0179	Fumarylacetoacetate (FAA) hydrolase
J9319_05310	COG0367	asparagine synthase
J9319_05325	COG1562	ergosterol biosynthetic process
J9319_05330	COG0534	Mate efflux family protein
J9319_05335	COG1917	Cupin 2, conserved barrel domain protein
J9319_05335	COG2207	Transcriptional regulator
J9319_05360	COG0076	glutamate decarboxylase activity
J9319_05395	COG0646	methionine synthase
J9319_05395	COG1410	methionine synthase
J9319_05400	COG0646	methionine synthase
J9319_05400	COG0685	methylenetetrahydrofolate reductase (NAD(P)H) activity
J9319_05405	COG1666	GTP binding
J9319_05410	COG2996	Protein conserved in bacteria
J9319_05415	COG1744	ABC transporter substrate-binding protein PnrA-like
J9319_05420	COG0840	transmembrane signaling receptor activity
J9319_05425	COG1307	EDD domain protein, DegV family
J9319_05430	COG1284	Uncharacterised 5xTM membrane BCR, YitT family COG1284
J9319_05450	COG0561	phosphatase activity
J9319_05455	COG1073	alpha beta
J9319_05460	COG2151	metal-sulfur cluster biosynthetic enzyme
J9319_05465	COG0277	FAD linked oxidase domain protein
J9319_05470	COG2271	Major facilitator Superfamily
J9319_05475	COG0002	Catalyzes the NADPH-dependent reduction of N-acetyl-5- glutamyl phosphate to yield N-acetyl-L-glutamate 5-semialdehyde
J9319_05480	COG1364	Catalyzes two activities which are involved in the cyclic version of arginine biosynthesis the synthesis of N- acetylglutamate from glutamate and acetyl-CoA as the acetyl donor, and of ornithine by transacetylation between N(2)-acetylornithine and glutamate
J9319_05485	COG0548	Belongs to the acetylglutamate kinase family. ArgB subfamily
J9319_05490	COG4992	N2-acetyl-L-ornithine:2-oxoglutarate 5-aminotransferase activity
J9319_05495	COG0505	Belongs to the CarA family
J9319_05500	COG0458	carbamoyl-phosphate synthase (glutamine-hydrolyzing) activity
J9319_05505	COG0078	Reversibly catalyzes the transfer of the carbamoyl group from carbamoyl phosphate (CP) to the N(epsilon) atom of ornithine (ORN) to produce L-citrulline
J9319_05515	COG2814	Major facilitator Superfamily
J9319_05525	COG2267	carboxylic ester hydrolase activity
J9319_05535	COG1744	ABC transporter substrate-binding protein PnrA-like
J9319_05550	COG0332	Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP. Catalyzes the first condensation reaction which initiates fatty acid synthesis and may therefore play a role in governing the total rate of fatty acid production. Possesses both acetoacetyl-ACP synthase and acetyl transacylase activities. Its substrate specificity determines the biosynthesis of branched- chain and or straight-chain of fatty acids
J9319_05555	COG0304	beta-ketoacyl-acyl-carrier-protein synthase II activity
J9319_05560	COG5504	Zn-dependent protease
J9319_05565	COG0444	Belongs to the ABC transporter superfamily
J9319_05570	COG4608	Belongs to the ABC transporter superfamily
J9319_05580	COG0601	transmembrane transport
J9319_05585	COG1173	ABC-type dipeptide oligopeptide nickel transport systems, permease components
J9319_05595	COG0180	Tryptophanyl-tRNA synthetase
J9319_05605	COG4166	transmembrane transport
J9319_05610	COG0601	transmembrane transport
J9319_05615	COG1173	ABC-type dipeptide oligopeptide nickel transport systems, permease components
J9319_05620	COG0444	Belongs to the ABC transporter superfamily
J9319_05625	COG4608	Belongs to the ABC transporter superfamily
J9319_05635	COG0456	acetyltransferase
J9319_05640	COG1393	Belongs to the ArsC family
J9319_05645	COG0861	Integral membrane protein TerC family
J9319_05650	COG4862	establishment of competence for transformation
J9319_05655	COG1502	Catalyzes the reversible phosphatidyl group transfer from one phosphatidylglycerol molecule to another to form cardiolipin (CL) (diphosphatidylglycerol) and glycerol
J9319_05665	COG1164	Oligoendopeptidase f
J9319_05675	COG2761	dithiol-disulfide isomerase involved in polyketide biosynthesis
J9319_05680	COG2346	COG2346, Truncated hemoglobins
J9319_05685	COG0741	lytic transglycosylase activity
J9319_05690	COG4116	CYTH
J9319_05700	COG2357	RelA SpoT domain protein
J9319_05705	COG0061	Involved in the regulation of the intracellular balance of NAD and NADP, and is a key enzyme in the biosynthesis of NADP. Catalyzes specifically the phosphorylation on 2'-hydroxyl of the adenosine moiety of NAD to yield NADP
J9319_05710	COG0564	pseudouridine synthase activity
J9319_05715	COG0639	Hydrolyzes diadenosine 5',5'''-P1,P4-tetraphosphate to yield ADP
J9319_05720	COG0475	glutathione-regulated potassium exporter activity
J9319_05720	COG0569	domain protein
J9319_05725	COG0819	Catalyzes an amino-pyrimidine hydrolysis reaction at the C5' of the pyrimidine moiety of thiamine compounds, a reaction that is part of a thiamine salvage pathway
J9319_05730	COG0352	thiamine-phosphate diphosphorylase activity
J9319_05740	COG2104	thiamine diphosphate biosynthetic process
J9319_05745	COG2022	thiamine diphosphate biosynthetic process
J9319_05750	COG0476	Involved in molybdopterin and thiamine biosynthesis, family 2
J9319_05755	COG0351	phosphomethylpyrimidine kinase
J9319_05760	COG0623	enoyl-[acyl-carrier-protein] reductase (NADH) activity
J9319_05815	COG0210	DNA helicase
J9319_05825	COG2153	protein acetylation
J9319_05830	COG1514	Hydrolyzes RNA 2',3'-cyclic phosphodiester to an RNA 2'- phosphomonoester
J9319_05835	COG2382	esterase
J9319_05840	COG0626	cystathionine gamma-synthase activity
J9319_05845	COG0626	cystathionine gamma-synthase activity
J9319_05855	COG0582	viral genome integration into host DNA
J9319_05860	COG2856	Zn peptidase
J9319_05870	COG3620	sequence-specific DNA binding
J9319_05875	COG1476	TRANSCRIPTIONal
J9319_05930	COG0305	Participates in initiation and elongation during chromosome replication
J9319_05940	COG4570	Endonuclease that resolves Holliday junction intermediates made during homologous genetic recombination and DNA repair. Exhibits sequence and structure-selective cleavage of four-way DNA junctions, where it introduces symmetrical nicks in two strands of the same polarity at the 5' side of dinucleotides. Corrects the defects in genetic recombination and DNA repair associated with inactivation of ruvAB or ruvC
J9319_05975	COG5444	nuclease activity
J9319_06020	COG1783	phage Terminase large subunit
J9319_06025	COG5518	Phage portal protein
J9319_06030	COG2369	cell adhesion
J9319_06040	COG0338	D12 class N6 adenine-specific DNA methyltransferase
J9319_06045	COG4653	Phage capsid family
J9319_06100	COG3953	SLT domain
J9319_06100	COG5280	Phage tail tape measure protein TP901
J9319_06100	COG3953	SLT domain
J9319_06100	COG5280	Phage tail tape measure protein TP901
J9319_06105	COG1652	LysM domain
J9319_06110	COG4193	domain, Protein
J9319_06120	COG3628	GPW Gp25 family protein
J9319_06125	COG3299	homolog of phage Mu protein gp47
J9319_06130	COG3778	Protein conserved in bacteria
J9319_06165	COG3409	Peptidoglycan-binding domain 1 protein
J9319_06165	COG5632	N-Acetylmuramoyl-L-alanine amidase
J9319_06180	COG1192	Involved in chromosome partitioning
J9319_06275	COG0825	malonyl-CoA metabolic process
J9319_06295	COG0457	Tetratricopeptide repeat
J9319_06310	COG0583	DNA-binding transcription factor activity
J9319_06330	COG0583	DNA-binding transcription factor activity
J9319_06335	COG2807	transmembrane transport
J9319_06355	COG0457	Tetratricopeptide repeat
J9319_06370	COG0787	Catalyzes the interconversion of L-alanine and D- alanine. May also act on other amino acids
J9319_06380	COG1309	transcriptional regulator
J9319_06390	COG1344	Flagellin is the subunit protein which polymerizes to form the filaments of bacterial flagella
J9319_06395	COG1344	Flagellin is the subunit protein which polymerizes to form the filaments of bacterial flagella
J9319_06415	COG4195	phage-related replication protein
J9319_06420	COG2856	Zn peptidase
J9319_06425	COG3409	Peptidoglycan-binding domain 1 protein
J9319_06425	COG5632	N-Acetylmuramoyl-L-alanine amidase
J9319_06440	COG0306	phosphate transporter
J9319_06445	COG1392	Phosphate transport regulator
J9319_06455	COG0405	Gamma-glutamyltransferase
J9319_06460	COG1613	Sulfate ABC transporter periplasmic sulfate-binding protein
J9319_06470	COG4208	sulfate ABC transporter
J9319_06475	COG1118	Part of the ABC transporter complex CysAWTP involved in sulfate thiosulfate import. Responsible for energy coupling to the transport system
J9319_06485	COG3775	system Galactitol-specific IIC component
J9319_06500	COG1063	alcohol dehydrogenase
J9319_06505	COG1071	oxidoreductase activity, acting on the aldehyde or oxo group of donors, disulfide as acceptor
J9319_06510	COG0022	dehydrogenase e1 component
J9319_06510	COG0508	dehydrogenase complex catalyzes the overall conversion of
J9319_06515	COG0508	dehydrogenase complex catalyzes the overall conversion of
J9319_06520	COG1249	Belongs to the class-I pyridine nucleotide-disulfide oxidoreductase family
J9319_06525	COG1028	Short-chain dehydrogenase reductase Sdr
J9319_06530	COG1028	Short-chain dehydrogenase reductase Sdr
J9319_06535	COG2390	Transcriptional regulator
J9319_06545	COG0531	amino acid
J9319_06550	COG0346	lactoylglutathione lyase activity
J9319_06555	COG0265	Trypsin-like serine proteases, typically periplasmic, contain C-terminal PDZ domain
J9319_06560	COG0345	Catalyzes the reduction of 1-pyrroline-5-carboxylate (PCA) to L-proline
J9319_06565	COG2362	D-Aminopeptidase
J9319_06570	COG0601	transmembrane transport
J9319_06575	COG1173	ABC-type dipeptide oligopeptide nickel transport systems, permease components
J9319_06580	COG0444	Belongs to the ABC transporter superfamily
J9319_06585	COG4166	transmembrane transport
J9319_06590	COG1619	proteins homologs of microcin C7 resistance protein MccF
J9319_06595	COG4948	Mandelate Racemase Muconate Lactonizing
J9319_06600	COG0791	NLP P60 protein
J9319_06605	COG4608	Belongs to the ABC transporter superfamily
J9319_06610	COG1834	amidinotransferase
J9319_06615	COG1607	acyl-coa hydrolase
J9319_06620	COG1695	Transcriptional regulator
J9319_06635	COG1670	COG1670 acetyltransferases, including N-acetylases of ribosomal proteins
J9319_06645	COG2076	Multidrug Resistance protein
J9319_06650	COG2076	Multidrug Resistance protein
J9319_06660	COG0788	formyltetrahydrofolate deformylase activity
J9319_06665	COG0263	Catalyzes the transfer of a phosphate group to glutamate to form L-glutamate 5-phosphate
J9319_06670	COG0014	Catalyzes the NADPH-dependent reduction of L-glutamate 5-phosphate into L-glutamate 5-semialdehyde and phosphate. The product spontaneously undergoes cyclization to form 1-pyrroline-5- carboxylate
J9319_06675	COG0457	Tetratricopeptide repeat
J9319_06685	COG1764	response to oxidative stress
J9319_06690	COG1846	Transcriptional regulator
J9319_06695	COG1764	response to oxidative stress
J9319_06700	COG0590	tRNA wobble adenosine to inosine editing
J9319_06705	COG0620	Catalyzes the transfer of a methyl group from 5- methyltetrahydrofolate to homocysteine resulting in methionine formation
J9319_06710	COG1404	Belongs to the peptidase S8 family
J9319_06725	COG0745	RESPONSE REGULATOR receiver
J9319_06730	COG5002	protein histidine kinase activity
J9319_06730	COG3850	Histidine kinase
J9319_06735	COG3212	peptidase
J9319_06740	COG3212	peptidase
J9319_06750	COG2239	Acts as a magnesium transporter
J9319_06760	COG0583	DNA-binding transcription factor activity
J9319_06770	COG0789	Transcriptional regulator
J9319_06785	COG1846	Transcriptional regulator
J9319_06790	COG3300	MHYT domain
J9319_06790	COG5001	Diguanylate cyclase
J9319_06795	COG0586	Pfam SNARE associated Golgi protein
J9319_06800	COG0861	Integral membrane protein TerC family
J9319_06805	COG1191	sigma factor activity
J9319_06825	COG0501	Belongs to the peptidase M48B family
J9319_06830	COG0168	Low-affinity potassium transport system. Interacts with trk system potassium uptake protein TrkA
J9319_06835	COG2323	membrane
J9319_06850	COG3594	Acyltransferase
J9319_06855	COG5002	protein histidine kinase activity
J9319_06860	COG0350	Involved in the cellular defense against the biological effects of O6-methylguanine (O6-MeG) and O4-methylthymine (O4-MeT) in DNA. Repairs the methylated nucleobase in DNA by stoichiometrically transferring the methyl group to a cysteine residue in the enzyme. This is a suicide reaction the enzyme is irreversibly inactivated
J9319_06865	COG0182	Catalyzes the interconversion of methylthioribose-1- phosphate (MTR-1-P) into methylthioribulose-1-phosphate (MTRu-1- P)
J9319_06870	COG4857	Catalyzes the phosphorylation of methylthioribose into methylthioribose-1-phosphate
J9319_06875	COG0436	Aminotransferase
J9319_06880	COG1850	ribulose-bisphosphate carboxylase activity
J9319_06885	COG4359	Dephosphorylates 2-hydroxy-3-keto-5-methylthiopentenyl- 1-phosphate (HK-MTPenyl-1-P) yielding 1,2-dihydroxy-3-keto-5- methylthiopentene (DHK-MTPene)
J9319_06890	COG0235	Class ii aldolase
J9319_06895	COG1791	Catalyzes 2 different reactions between oxygene and the acireductone 1,2-dihydroxy-3-keto-5-methylthiopentene (DHK-MTPene) depending upon the metal bound in the active site. Fe-containing acireductone dioxygenase (Fe-ARD) produces formate and 2-keto-4- methylthiobutyrate (KMTB), the alpha-ketoacid precursor of methionine in the methionine recycle pathway. Ni-containing acireductone dioxygenase (Ni-ARD) produces methylthiopropionate, carbon monoxide and formate, and does not lie on the methionine recycle pathway
J9319_06905	COG3852	Histidine kinase
J9319_06910	COG1846	Transcriptional regulator
J9319_06915	COG1360	Flagellar Motor Protein
J9319_06920	COG1291	archaeal or bacterial-type flagellum-dependent cell motility
J9319_06930	COG0542	response to heat
J9319_06935	COG3949	Membrane
J9319_06940	COG0603	Catalyzes the ATP-dependent conversion of 7-carboxy-7- deazaguanine (CDG) to 7-cyano-7-deazaguanine (preQ(0))
J9319_06945	COG0720	synthase
J9319_06950	COG0602	queuosine metabolic process
J9319_06955	COG0780	Catalyzes the NADPH-dependent reduction of 7-cyano-7- deazaguanine (preQ0) to 7-aminomethyl-7-deazaguanine (preQ1)
J9319_06970	COG4873	Protein conserved in bacteria
J9319_06980	COG3773	Cell wall hydrolase
J9319_06985	COG2244	polysaccharide biosynthetic process
J9319_06990	COG0526	COG0526, thiol-disulfide isomerase and thioredoxins
J9319_06995	COG2217	Heavy metal translocating P-type atpase
J9319_07000	COG0006	proline dipeptidase activity
J9319_07005	COG1609	Transcriptional regulator
J9319_07010	COG3711	transcriptional antiterminator
J9319_07015	COG2190	(PTS) system
J9319_07015	COG1263	PTS System
J9319_07015	COG1264	protein-N(PI)-phosphohistidine-sugar phosphotransferase activity
J9319_07020	COG1925	phosphoenolpyruvate-dependent sugar phosphotransferase system
J9319_07025	COG1080	General (non sugar-specific) component of the phosphoenolpyruvate-dependent sugar phosphotransferase system (sugar PTS). This major carbohydrate active-transport system catalyzes the phosphorylation of incoming sugar substrates concomitantly with their translocation across the cell membrane. Enzyme I transfers the phosphoryl group from phosphoenolpyruvate (PEP) to the phosphoryl carrier protein (HPr)
J9319_07035	COG1533	DNA photolyase activity
J9319_07040	COG0840	transmembrane signaling receptor activity
J9319_07050	COG2084	Dehydrogenase
J9319_07055	COG2340	Cysteine-rich secretory protein family
J9319_07060	COG0768	penicillin binding
J9319_07065	COG4191	Histidine kinase
J9319_07070	COG0436	Aminotransferase
J9319_07075	COG0053	Belongs to the cation diffusion facilitator (CDF) transporter (TC 2.A.4) family
J9319_07085	COG1714	RDD family
J9319_07095	COG0835	chemotaxis
J9319_07095	COG0784	Response regulator, receiver
J9319_07115	COG2814	Major facilitator Superfamily
J9319_07120	COG1376	ErfK ybiS ycfS ynhG family protein
J9319_07125	COG1408	metallophosphoesterase
J9319_07130	COG1028	Short-chain dehydrogenase reductase Sdr
J9319_07135	COG2200	EAL domain
J9319_07140	COG3546	catalase activity
J9319_07145	COG4703	Protein of unknown function (DUF1797)
J9319_07150	COG1978	Selenoprotein B, glycine betaine sarcosine D-proline reductase family
J9319_07160	COG0517	IMP dehydrogenase activity
J9319_07165	COG0583	DNA-binding transcription factor activity
J9319_07175	COG0716	FMN binding
J9319_07185	COG0716	FMN binding
J9319_07190	COG2171	N-acyltransferase activity
J9319_07195	COG1473	amidohydrolase
J9319_07205	COG0668	transmembrane transport
J9319_07210	COG0450	alkyl hydroperoxide reductase
J9319_07215	COG0526	COG0526, thiol-disulfide isomerase and thioredoxins
J9319_07230	COG0746	molybdenum cofactor guanylyltransferase activity
J9319_07235	COG0476	Involved in molybdopterin and thiamine biosynthesis, family 2
J9319_07240	COG0303	'Molybdopterin
J9319_07245	COG1763	Mo-molybdopterin cofactor biosynthetic process
J9319_07250	COG0314	molybdopterin synthase activity
J9319_07255	COG1977	Involved in sulfur transfer in the conversion of molybdopterin precursor Z to molybdopterin
J9319_07270	COG0845	Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family
J9319_07275	COG1136	(ABC) transporter
J9319_07280	COG0577	efflux transmembrane transporter activity
J9319_07285	COG1349	DNA-binding transcription factor activity
J9319_07290	COG1105	Belongs to the carbohydrate kinase PfkB family
J9319_07295	COG1299	protein-N(PI)-phosphohistidine-fructose phosphotransferase system transporter activity
J9319_07295	COG1445	protein-N(PI)-phosphohistidine-fructose phosphotransferase system transporter activity
J9319_07295	COG1762	phosphoenolpyruvate-dependent sugar phosphotransferase system
J9319_07300	COG0681	Belongs to the peptidase S26 family
J9319_07310	COG0488	(ABC) transporter
J9319_07315	COG2309	aminopeptidase activity
J9319_07325	COG1077	Cell shape determining protein MreB Mrl
J9319_07330	COG2002	toxin-antitoxin pair type II binding
J9319_07335	COG3852	Histidine kinase
J9319_07340	COG3703	Catalyzes the cleavage of glutathione into 5-oxo-L- proline and a Cys-Gly dipeptide. Acts specifically on glutathione, but not on other gamma-glutamyl peptides
J9319_07340	COG2105	PFAM AIG2 family protein
J9319_07345	COG0569	domain protein
J9319_07350	COG1001	Belongs to the metallo-dependent hydrolases superfamily. Adenine deaminase family
J9319_07355	COG0595	An RNase that has 5'-3' exonuclease and possibly endonuclease activity. Involved in maturation of rRNA and in some organisms also mRNA maturation and or decay
J9319_07360	COG5503	Protein of unknown function (DUF1447)
J9319_07365	COG0561	phosphatase activity
J9319_07370	COG0242	peptide deformylase activity
J9319_07385	COG1071	oxidoreductase activity, acting on the aldehyde or oxo group of donors, disulfide as acceptor
J9319_07390	COG0022	dehydrogenase e1 component
J9319_07395	COG0508	dehydrogenase complex catalyzes the overall conversion of
J9319_07400	COG1249	Belongs to the class-I pyridine nucleotide-disulfide oxidoreductase family
J9319_07405	COG0526	COG0526, thiol-disulfide isomerase and thioredoxins
J9319_07415	COG1982	Orn Lys Arg decarboxylase major
J9319_07420	COG4476	Belongs to the UPF0223 family
J9319_07425	COG4493	Belongs to the UPF0637 family
J9319_07435	COG0483	inositol monophosphate 1-phosphatase activity
J9319_07465	COG1217	gtp-binding protein TYPA
J9319_07475	COG4896	Protein conserved in bacteria
J9319_07485	COG1875	ATPase related to phosphate starvation-inducible protein PhoH
J9319_07490	COG2041	Part of the MsrPQ system that repairs oxidized periplasmic proteins containing methionine sulfoxide residues (Met-O), using respiratory chain electrons. Thus protects these proteins from oxidative-stress damage caused by reactive species of oxygen and chlorine generated by the host defense mechanisms. MsrPQ is essential for the maintenance of envelope integrity under bleach stress, rescuing a wide series of structurally unrelated periplasmic proteins from methionine oxidation. The catalytic subunit MsrP is non-stereospecific, being able to reduce both (R-) and (S-) diastereoisomers of methionine sulfoxide
J9319_07495	COG2066	Belongs to the glutaminase family
J9319_07500	COG4838	Belongs to the UPF0358 family
J9319_07505	COG0772	Belongs to the SEDS family
J9319_07510	COG1038	Catalyzes a 2-step reaction, involving the ATP-dependent carboxylation of the covalently attached biotin in the first step and the transfer of the carboxyl group to pyruvate in the second
J9319_07515	COG0415	Belongs to the DNA photolyase family
J9319_07520	COG1612	heme a metabolic process
J9319_07525	COG0109	protoheme IX farnesyltransferase activity
J9319_07530	COG2010	Cytochrome c
J9319_07530	COG1622	oxidoreductase activity, acting on a heme group of donors, oxygen as acceptor
J9319_07535	COG0843	Cytochrome c oxidase is the component of the respiratory chain that catalyzes the reduction of oxygen to water. Subunits 1- 3 form the functional core of the enzyme complex. CO I is the catalytic subunit of the enzyme. Electrons originating in cytochrome c are transferred via the copper A center of subunit 2 and heme A of subunit 1 to the bimetallic center formed by heme A3 and copper B
J9319_07540	COG1845	cytochrome c oxidase, subunit III
J9319_07545	COG3125	oxidoreductase activity, acting on diphenols and related substances as donors, oxygen as acceptor
J9319_07550	COG3336	cytochrome c oxidase
J9319_07560	COG2905	signal-transduction protein containing cAMP-binding and CBS domains
J9319_07565	COG2340	Cysteine-rich secretory protein family
J9319_07585	COG3679	Belongs to the UPF0342 family
J9319_07590	COG4471	UPF0298 protein
J9319_07595	COG0742	ribosomal rna small subunit methyltransferase
J9319_07600	COG0669	Reversibly transfers an adenylyl group from ATP to 4'- phosphopantetheine, yielding dephospho-CoA (dPCoA) and pyrophosphate
J9319_07605	COG3314	Sporulation integral membrane protein YlbJ
J9319_07610	COG1752	Esterase of the alpha-beta hydrolase superfamily
J9319_07615	COG3480	Lon protease (S16) C-terminal proteolytic domain
J9319_07625	COG1399	metal-binding, possibly nucleic acid-binding protein
J9319_07630	COG0333	Belongs to the bacterial ribosomal protein bL32 family
J9319_07640	COG0454	-acetyltransferase
J9319_07645	COG1893	Catalyzes the NADPH-dependent reduction of ketopantoate into pantoic acid
J9319_07650	COG4365	Involved in bacillithiol (BSH) biosynthesis. May catalyze the last step of the pathway, the addition of cysteine to glucosamine malate (GlcN-Mal) to generate BSH
J9319_07655	COG2001	Belongs to the MraZ family
J9319_07660	COG0275	rRNA processing
J9319_07665	COG4839	cell division protein FtsL
J9319_07670	COG0768	penicillin binding
J9319_07675	COG0768	penicillin binding
J9319_07680	COG0769	Catalyzes the addition of meso-diaminopimelic acid to the nucleotide precursor UDP-N-acetylmuramoyl-L-alanyl-D-glutamate (UMAG) in the biosynthesis of bacterial cell-wall peptidoglycan
J9319_07685	COG0472	First step of the lipid cycle reactions in the biosynthesis of the cell wall peptidoglycan
J9319_07690	COG0771	Cell wall formation. Catalyzes the addition of glutamate to the nucleotide precursor UDP-N-acetylmuramoyl-L-alanine (UMA)
J9319_07695	COG0772	Belongs to the SEDS family
J9319_07700	COG0707	Cell wall formation. Catalyzes the transfer of a GlcNAc subunit on undecaprenyl-pyrophosphoryl-MurNAc-pentapeptide (lipid intermediate I) to form undecaprenyl-pyrophosphoryl-MurNAc- (pentapeptide)GlcNAc (lipid intermediate II)
J9319_07705	COG0812	UDP-N-acetylmuramate dehydrogenase activity
J9319_07710	COG1589	Essential cell division protein. May link together the upstream cell division proteins, which are predominantly cytoplasmic, with the downstream cell division proteins, which are predominantly periplasmic. May control correct divisome assembly
J9319_07715	COG3879	Bacterial protein of unknown function (DUF881)
J9319_07720	COG3879	Bacterial protein of unknown function (DUF881)
J9319_07725	COG3856	small basic protein
J9319_07730	COG0849	cell division
J9319_07735	COG0206	Essential cell division protein that forms a contractile ring structure (Z ring) at the future cell division site. The regulation of the ring assembly controls the timing and the location of cell division. One of the functions of the FtsZ ring is to recruit other cell division proteins to the septum to produce a new cell wall between the dividing cells. Binds GTP and shows GTPase activity
J9319_07740	COG1404	Belongs to the peptidase S8 family
J9319_07740	COG4412	M6 family metalloprotease domain protein
J9319_07750	COG1191	sigma factor activity
J9319_07755	COG1191	sigma factor activity
J9319_07760	COG2390	Transcriptional regulator
J9319_07775	COG3730	PTS system glucitol sorbitol-specific
J9319_07780	COG3732	PTS system glucitol sorbitol-specific
J9319_07790	COG1119	ATPase activity
J9319_07795	COG1873	PFAM PRC-barrel domain
J9319_07800	COG1496	oxidoreductase activity
J9319_07805	COG0325	Pyridoxal 5'-phosphate (PLP)-binding protein, which is involved in PLP homeostasis
J9319_07810	COG1799	cell septum assembly
J9319_07815	COG0762	integral membrane protein
J9319_07820	COG2302	S4 RNA-binding domain
J9319_07825	COG3599	regulation of cell shape
J9319_07830	COG0060	amino acids such as valine, to avoid such errors it has two additional distinct tRNA(Ile)-dependent editing activities. One activity is designated as 'pretransfer' editing and involves the hydrolysis of activated Val-AMP. The other activity is designated 'posttransfer' editing and involves deacylation of mischarged Val-tRNA(Ile)
J9319_07835	COG1734	Transcription factor that acts by binding directly to the RNA polymerase (RNAP). Required for negative regulation of rRNA expression and positive regulation of several amino acid biosynthesis promoters
J9319_07840	COG0597	This protein specifically catalyzes the removal of signal peptides from prolipoproteins
J9319_07845	COG0564	pseudouridine synthase activity
J9319_07850	COG2065	Also displays a weak uracil phosphoribosyltransferase activity which is not physiologically significant
J9319_07855	COG2233	PERMEase
J9319_07860	COG0540	Belongs to the ATCase OTCase family
J9319_07865	COG0044	hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in cyclic amides
J9319_07870	COG0505	Belongs to the CarA family
J9319_07875	COG0458	carbamoyl-phosphate synthase (glutamine-hydrolyzing) activity
J9319_07880	COG0543	2 iron, 2 sulfur cluster binding
J9319_07885	COG0167	dihydroorotate dehydrogenase activity
J9319_07890	COG0284	orotidine-5'-phosphate decarboxylase activity
J9319_07895	COG0461	Catalyzes the transfer of a ribosyl phosphate group from 5-phosphoribose 1-diphosphate to orotate, leading to the formation of orotidine monophosphate (OMP)
J9319_07905	COG0175	sulfate reduction
J9319_07910	COG0306	phosphate transporter
J9319_07915	COG2046	Belongs to the sulfate adenylyltransferase family
J9319_07920	COG0529	Catalyzes the synthesis of activated sulfate
J9319_07925	COG0007	Multifunctional enzyme that catalyzes the SAM-dependent methylations of uroporphyrinogen III at position C-2 and C-7 to form precorrin-2 via precorrin-1. Then it catalyzes the NAD- dependent ring dehydrogenation of precorrin-2 to yield sirohydrochlorin. Finally, it catalyzes the ferrochelation of sirohydrochlorin to yield siroheme
J9319_07930	COG2138	Cobalamin (vitamin B12) biosynthesis CbiX protein
J9319_07935	COG1648	precorrin-2 dehydrogenase activity
J9319_07945	COG0474	ATPase, P-type transporting, HAD superfamily, subfamily IC
J9319_07950	COG1561	YicC-like family, N-terminal region
J9319_07955	COG2052	Domain of unknown function (DUF370)
J9319_07960	COG0194	GDP metabolic process
J9319_07965	COG1758	RNA polymerase activity
J9319_07970	COG0452	Catalyzes two steps in the biosynthesis of coenzyme A. In the first step cysteine is conjugated to 4'-phosphopantothenate to form 4-phosphopantothenoylcysteine, in the latter compound is decarboxylated to form 4'-phosphopantotheine
J9319_07975	COG1198	Involved in the restart of stalled replication forks. Recognizes and binds the arrested nascent DNA chain at stalled replication forks. It can open the DNA duplex, via its helicase activity, and promote assembly of the primosome and loading of the major replicative helicase DnaB onto DNA
J9319_07980	COG0242	peptide deformylase activity
J9319_07985	COG0223	Attaches a formyl group to the free amino group of methionyl-tRNA(fMet). The formyl group appears to play a dual role in the initiator identity of N-formylmethionyl-tRNA by promoting its recognition by IF2 and preventing the misappropriation of this tRNA by the elongation apparatus
J9319_07990	COG0781	Involved in transcription antitermination. Required for transcription of ribosomal RNA (rRNA) genes. Binds specifically to the boxA antiterminator sequence of the ribosomal RNA (rrn) operons
J9319_07990	COG0144	Specifically methylates the cytosine at position 967 (m5C967) of 16S rRNA
J9319_07995	COG0820	rRNA (adenine-C2-)-methyltransferase activity
J9319_08000	COG0631	protein serine/threonine phosphatase activity
J9319_08005	COG0515	serine threonine protein kinase
J9319_08005	COG2815	serine threonine protein kinase
J9319_08010	COG1162	GTPase activity
J9319_08015	COG0036	Belongs to the ribulose-phosphate 3-epimerase family
J9319_08020	COG1564	THIamine pyrophosphokinase
J9319_08030	COG0227	Belongs to the bacterial ribosomal protein bL28 family
J9319_08035	COG1302	Protein conserved in bacteria
J9319_08040	COG1461	Dihydroxyacetone kinase
J9319_08045	COG1760	l-serine dehydratase
J9319_08050	COG1760	l-serine dehydratase
J9319_08055	COG1200	Critical role in recombination and DNA repair. Helps process Holliday junction intermediates to mature products by catalyzing branch migration. Has a DNA unwinding activity characteristic of a DNA helicase with a 3'- to 5'- polarity. Unwinds branched duplex DNA (Y-DNA)
J9319_08060	COG1349	DNA-binding transcription factor activity
J9319_08065	COG0416	fatty acid biosynthetic process
J9319_08070	COG0331	[acyl-carrier-protein] S-malonyltransferase activity
J9319_08075	COG1028	Short-chain dehydrogenase reductase Sdr
J9319_08080	COG0236	Carrier of the growing fatty acid chain in fatty acid biosynthesis
J9319_08090	COG1196	nuclear chromosome segregation
J9319_08095	COG0552	protein localization to endoplasmic reticulum
J9319_08105	COG2739	Might take part in the signal recognition particle (SRP) pathway. This is inferred from the conservation of its genetic proximity to ftsY ffh. May be a regulatory protein
J9319_08110	COG0541	Involved in targeting and insertion of nascent membrane proteins into the cytoplasmic membrane. Binds to the hydrophobic signal sequence of the ribosome-nascent chain (RNC) as it emerges from the ribosomes. The SRP-RNC complex is then targeted to the cytoplasmic membrane where it interacts with the SRP receptor FtsY
J9319_08115	COG0228	four-way junction DNA binding
J9319_08120	COG1837	Belongs to the UPF0109 family
J9319_08130	COG0806	An accessory protein needed during the final step in the assembly of 30S ribosomal subunit, possibly for assembly of the head region. Probably interacts with S19. Essential for efficient processing of 16S rRNA. May be needed both before and after RbfA during the maturation of 16S rRNA. It has affinity for free ribosomal 30S subunits but not for 70S ribosomes
J9319_08135	COG0336	Belongs to the RNA methyltransferase TrmD family
J9319_08140	COG0335	large ribosomal subunit rRNA binding
J9319_08145	COG1161	Required for a late step of 50S ribosomal subunit assembly. Has GTPase activity
J9319_08150	COG0164	Endonuclease that specifically degrades the RNA of RNA- DNA hybrids
J9319_08160	COG2257	FlhB HrpN YscU SpaS Family
J9319_08165	COG0045	succinate-CoA ligase (ADP-forming) activity
J9319_08170	COG0074	Succinyl-CoA synthetase functions in the citric acid cycle (TCA), coupling the hydrolysis of succinyl-CoA to the synthesis of either ATP or GTP and thus represents the only step of substrate-level phosphorylation in the TCA. The alpha subunit of the enzyme binds the substrates coenzyme A and phosphate, while succinate binding and nucleotide specificity is provided by the beta subunit
J9319_08175	COG0758	DNA mediated transformation
J9319_08180	COG0550	Releases the supercoiling and torsional tension of DNA, which is introduced during the DNA replication and transcription, by transiently cleaving and rejoining one strand of the DNA duplex. Introduces a single-strand break via transesterification at a target site in duplex DNA. The scissile phosphodiester is attacked by the catalytic tyrosine of the enzyme, resulting in the formation of a DNA-(5'-phosphotyrosyl)-enzyme intermediate and the expulsion of a 3'-OH DNA strand. The free DNA strand then undergoes passage around the unbroken strand, thus removing DNA supercoils. Finally, in the religation step, the DNA 3'-OH attacks the covalent intermediate to expel the active-site tyrosine and restore the DNA phosphodiester backbone
J9319_08185	COG1206	Catalyzes the folate-dependent formation of 5-methyl- uridine at position 54 (M-5-U54) in all tRNAs
J9319_08190	COG4974	Belongs to the 'phage' integrase family
J9319_08195	COG5405	Protease subunit of a proteasome-like degradation complex believed to be a general protein degrading machinery
J9319_08200	COG1220	this subunit has chaperone activity. The binding of ATP and its subsequent hydrolysis by HslU are essential for unfolding of protein substrates subsequently hydrolyzed by HslV. HslU recognizes the N-terminal part of its protein substrates and unfolds these before they are guided to HslV for hydrolysis
J9319_08205	COG4465	DNA-binding protein that represses the expression of many genes that are induced as cells make the transition from rapid exponential growth to stationary phase. It is a GTP-binding protein that senses the intracellular GTP concentration as an indicator of nutritional limitations. At low GTP concentration it no longer binds GTP and stop to act as a transcriptional repressor
J9319_08210	COG1815	bacterial-type flagellum-dependent cell motility
J9319_08215	COG1558	bacterial-type flagellum-dependent cell motility
J9319_08220	COG1677	Flagellar hook-basal body complex protein FliE
J9319_08225	COG1766	The M ring may be actively involved in energy transduction
J9319_08230	COG1536	FliG is one of three proteins (FliG, FliN, FliM) that forms the rotor-mounted switch complex (C ring), located at the base of the basal body. This complex interacts with the CheY and CheZ chemotaxis proteins, in addition to contacting components of the motor that determine the direction of flagellar rotation
J9319_08235	COG1317	bacterial-type flagellum organization
J9319_08240	COG1157	protein secretion by the type III secretion system
J9319_08245	COG2882	bacterial-type flagellum organization
J9319_08250	COG3334	PFAM MgtE intracellular
J9319_08255	COG3144	bacterial-type flagellum assembly
J9319_08260	COG1843	Required for flagellar hook formation. May act as a scaffolding protein
J9319_08265	COG4786	Flagellar basal body rod
J9319_08270	COG1582	Flagellar protein (FlbD)
J9319_08275	COG1580	Controls the rotational direction of flagella during chemotaxis
J9319_08280	COG1868	FliM is one of three proteins (FliG, FliN, FliM) that forms the rotor-mounted switch complex (C ring), located at the base of the basal body. This complex interacts with the CheY and CheZ chemotaxis proteins, in addition to contacting components of the motor that determine the direction of flagellar rotation
J9319_08285	COG1776	CheC inhibitor of MCP methylation
J9319_08285	COG1886	FliN is one of three proteins (FliG, FliN, FliM) that form the rotor-mounted switch complex (C ring), located at the base of the basal body. This complex interacts with the CheY and CheZ chemotaxis proteins, in addition to contacting components of the motor that determine the direction of flagellar rotation
J9319_08290	COG2201	protein-glutamate methylesterase activity
J9319_08295	COG3190	flagellar
J9319_08300	COG1338	Plays a role in the flagellum-specific transport system
J9319_08305	COG1987	bacterial-type flagellum assembly
J9319_08310	COG1684	flagellar biosynthetic protein fliR
J9319_08315	COG1377	Required for formation of the rod structure in the basal body of the flagellar apparatus. Together with FliI and FliH, may constitute the export apparatus of flagellin
J9319_08320	COG1298	Required for formation of the rod structure of the flagellar apparatus. Together with FliI and FliH, may constitute the export apparatus of flagellin
J9319_08325	COG1419	protein localization to endoplasmic reticulum
J9319_08330	COG0455	bacterial-type flagellum organization
J9319_08335	COG2201	protein-glutamate methylesterase activity
J9319_08340	COG0643	Histidine kinase
J9319_08340	COG2198	Histidine kinase
J9319_08345	COG0835	chemotaxis
J9319_08350	COG1776	CheC inhibitor of MCP methylation
J9319_08360	COG1191	sigma factor activity
J9319_08375	COG0264	Associates with the EF-Tu.GDP complex and induces the exchange of GDP to GTP. It remains bound to the aminoacyl-tRNA.EF- Tu.GTP complex up to the GTP hydrolysis stage on the ribosome
J9319_08380	COG0528	UMP kinase activity
J9319_08385	COG0233	cytoplasmic translational termination
J9319_08390	COG0020	Catalyzes the condensation of isopentenyl diphosphate (IPP) with allylic pyrophosphates generating different type of terpenoids
J9319_08395	COG4589	Belongs to the CDS family
J9319_08400	COG0743	1-deoxy-D-xylulose-5-phosphate reductoisomerase activity
J9319_08405	COG0750	zinc metalloprotease
J9319_08410	COG0442	prolyl-tRNA aminoacylation
J9319_08415	COG2176	DNA-directed DNA polymerase activity
J9319_08430	COG3693	PFAM glycoside hydrolase, family 10
J9319_08440	COG0779	Required for maturation of 30S ribosomal subunits
J9319_08445	COG0195	Participates in both transcription termination and antitermination
J9319_08450	COG2740	Nucleic-acid-binding protein implicated in transcription termination
J9319_08455	COG1358	cellular component organization or biogenesis
J9319_08460	COG0532	One of the essential components for the initiation of protein synthesis. Protects formylmethionyl-tRNA from spontaneous hydrolysis and promotes its binding to the 30S ribosomal subunits. Also involved in the hydrolysis of GTP during the formation of the 70S ribosomal complex
J9319_08465	COG1550	Protein conserved in bacteria
J9319_08470	COG0858	One of several proteins that assist in the late maturation steps of the functional core of the 30S ribosomal subunit. Associates with free 30S ribosomal subunits (but not with 30S subunits that are part of 70S ribosomes or polysomes). Required for efficient processing of 16S rRNA. May interact with the 5'-terminal helix region of 16S rRNA
J9319_08475	COG0130	Responsible for synthesis of pseudouridine from uracil- 55 in the psi GC loop of transfer RNAs
J9319_08480	COG0196	riboflavin kinase activity
J9319_08485	COG0184	Forms an intersubunit bridge (bridge B4) with the 23S rRNA of the 50S subunit in the ribosome
J9319_08490	COG1185	polyribonucleotide nucleotidyltransferase activity
J9319_08495	COG0726	polysaccharide deacetylase
J9319_08500	COG0612	Peptidase, M16
J9319_08510	COG1873	PFAM PRC-barrel domain
J9319_08515	COG1052	Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family
J9319_08520	COG0452	Catalyzes two steps in the biosynthesis of coenzyme A. In the first step cysteine is conjugated to 4'-phosphopantothenate to form 4-phosphopantothenoylcysteine, in the latter compound is decarboxylated to form 4'-phosphopantotheine
J9319_08525	COG0136	Catalyzes the NADPH-dependent formation of L-aspartate- semialdehyde (L-ASA) by the reductive dephosphorylation of L- aspartyl-4-phosphate
J9319_08530	COG0527	aspartate kinase activity
J9319_08540	COG0595	An RNase that has 5'-3' exonuclease and possibly endonuclease activity. Involved in maturation of rRNA and in some organisms also mRNA maturation and or decay
J9319_08545	COG0740	serine-type endopeptidase activity
J9319_08555	COG1674	ftsk spoiiie
J9319_08555	COG4980	gas vesicle protein
J9319_08560	COG2188	Transcriptional regulator
J9319_08565	COG2814	Major facilitator Superfamily
J9319_08570	COG2409	Drug exporters of the RND superfamily
J9319_08570	COG1033	growth of symbiont in host cell
J9319_08575	COG0612	Peptidase, M16
J9319_08580	COG0612	Peptidase, M16
J9319_08590	COG1033	growth of symbiont in host cell
J9319_08590	COG2409	Drug exporters of the RND superfamily
J9319_08595	COG0300	oxidoreductase activity
J9319_08610	COG1426	Protein conserved in bacteria
J9319_08615	COG0558	Belongs to the CDP-alcohol phosphatidyltransferase class-I family
J9319_08620	COG1546	Belongs to the CinA family
J9319_08620	COG1058	Belongs to the CinA family
J9319_08625	COG0468	Can catalyze the hydrolysis of ATP in the presence of single-stranded DNA, the ATP-dependent uptake of single-stranded DNA by duplex DNA, and the ATP-dependent hybridization of homologous single-stranded DNAs. It interacts with LexA causing its activation and leading to its autocatalytic cleavage
J9319_08630	COG1418	mRNA catabolic process
J9319_08635	COG1692	metallophosphoesterase
J9319_08640	COG2359	stage V sporulation protein S
J9319_08645	COG0841	Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family
J9319_08650	COG1063	alcohol dehydrogenase
J9319_08655	COG0156	8-amino-7-oxononanoate synthase activity
J9319_08665	COG0621	Catalyzes the methylthiolation of N6- (dimethylallyl)adenosine (i(6)A), leading to the formation of 2- methylthio-N6-(dimethylallyl)adenosine (ms(2)i(6)A) at position 37 in tRNAs that read codons beginning with uridine
J9319_08670	COG4550	Control of competence regulator ComK, YlbF/YmcA
J9319_08680	COG0249	that it carries out the mismatch recognition step. This protein has a weak ATPase activity
J9319_08685	COG0323	This protein is involved in the repair of mismatches in DNA. It is required for dam-dependent methyl-directed DNA mismatch repair. May act as a molecular matchmaker , a protein that promotes the formation of a stable complex between two or more DNA-binding proteins in an ATP-dependent manner without itself being part of a final effector complex
J9319_08705	COG1329	Transcriptional regulator
J9319_08710	COG4195	phage-related replication protein
J9319_08715	COG0457	Tetratricopeptide repeat
J9319_08720	COG1404	Belongs to the peptidase S8 family
J9319_08725	COG4195	phage-related replication protein
J9319_08730	COG1764	response to oxidative stress
J9319_08760	COG0324	Catalyzes the transfer of a dimethylallyl group onto the adenine at position 37 in tRNAs that read codons beginning with uridine, leading to the formation of N6-(dimethylallyl)adenosine (i(6)A)
J9319_08765	COG1923	regulation of RNA biosynthetic process
J9319_08780	COG1780	Probably involved in ribonucleotide reductase function
J9319_08785	COG0209	Provides the precursors necessary for DNA synthesis. Catalyzes the biosynthesis of deoxyribonucleotides from the corresponding ribonucleotides
J9319_08790	COG0208	Provides the precursors necessary for DNA synthesis. Catalyzes the biosynthesis of deoxyribonucleotides from the corresponding ribonucleotides
J9319_08795	COG4112	unkown
J9319_08805	COG0464	growth
J9319_08810	COG2262	GTPase that associates with the 50S ribosomal subunit and may have a role during protein synthesis or ribosome biogenesis
J9319_08815	COG4100	CystaTHIonine beta-lyase family protein involved in aluminum resistance
J9319_08820	COG0789	Transcriptional regulator
J9319_08825	COG0174	glutamine synthetase
J9319_08845	COG0494	nUDIX hydrolase
J9319_08850	COG0457	Tetratricopeptide repeat
J9319_08870	COG5444	nuclease activity
J9319_08895	COG5646	InterPro IPR014922
J9319_08915	COG0457	Tetratricopeptide repeat
J9319_08925	COG3619	membrane
J9319_08930	COG1793	dna ligase
J9319_08930	COG3285	dna ligase
J9319_08935	COG1273	With LigD forms a non-homologous end joining (NHEJ) DNA repair enzyme, which repairs dsDNA breaks with reduced fidelity. Binds linear dsDNA with 5'- and 3'- overhangs but not closed circular dsDNA nor ssDNA. Recruits and stimulates the ligase activity of LigD
J9319_08940	COG4876	unkown
J9319_08950	COG1959	2 iron, 2 sulfur cluster binding
J9319_08955	COG0702	epimerase
J9319_08965	COG0247	lactate metabolic process
J9319_08970	COG1139	Iron-sulfur cluster binding protein
J9319_08975	COG1556	Lactate utilization protein
J9319_08995	COG2323	membrane
J9319_09000	COG1309	transcriptional regulator
J9319_09005	COG2124	cytochrome p450
J9319_09005	COG0369	Component of the sulfite reductase complex that catalyzes the 6-electron reduction of sulfite to sulfide. This is one of several activities required for the biosynthesis of L- cysteine from sulfate. The flavoprotein component catalyzes the electron flow from NADPH - FAD - FMN to the hemoprotein component
J9319_09010	COG3591	Belongs to the peptidase S1B family
J9319_09020	COG3209	COG3209 Rhs family protein
J9319_09025	COG1366	Belongs to the anti-sigma-factor antagonist family
J9319_09040	COG1974	Represses a number of genes involved in the response to DNA damage (SOS response), including recA and lexA. In the presence of single-stranded DNA, RecA interacts with LexA causing an autocatalytic cleavage which disrupts the DNA-binding part of LexA, leading to derepression of the SOS regulon and eventually DNA repair
J9319_09045	COG1388	LysM domain
J9319_09050	COG1961	COG1961 Site-specific recombinases, DNA invertase Pin homologs
J9319_09055	COG4224	UPF0291 protein
J9319_09060	COG0021	Catalyzes the transfer of a two-carbon ketol group from a ketose donor to an aldose acceptor, via a covalent intermediate with the cofactor thiamine pyrophosphate
J9319_09070	COG3763	UPF0154 protein
J9319_09080	COG0785	Cytochrome C biogenesis protein
J9319_09085	COG4846	Membrane protein involved in cytochrome C biogenesis
J9319_09095	COG0071	Belongs to the small heat shock protein (HSP20) family
J9319_09110	COG1048	Catalyzes the isomerization of citrate to isocitrate via cis-aconitate
J9319_09115	COG0526	COG0526, thiol-disulfide isomerase and thioredoxins
J9319_09135	COG0824	Thioesterase
J9319_09145	COG4841	protein insertion into membrane
J9319_09150	COG0344	acyl-phosphate glycerol-3-phosphate acyltransferase activity
J9319_09155	COG1832	CoA-binding protein
J9319_09160	COG0187	DNA topoisomerase II activity
J9319_09165	COG0188	A type II topoisomerase that negatively supercoils closed circular double-stranded (ds) DNA in an ATP-dependent manner to modulate DNA topology and maintain chromosomes in an underwound state. Negative supercoiling favors strand separation, and DNA replication, transcription, recombination and repair, all of which involve strand separation. Also able to catalyze the interconversion of other topological isomers of dsDNA rings, including catenanes and knotted rings. Type II topoisomerases break and join 2 DNA strands simultaneously in an ATP-dependent manner
J9319_09175	COG0738	Major facilitator superfamily
J9319_09180	COG0473	3-isopropylmalate dehydrogenase activity
J9319_09190	COG0394	Belongs to the low molecular weight phosphotyrosine protein phosphatase family
J9319_09195	COG1055	Involved in arsenical resistance. Thought to form the channel of an arsenite pump
J9319_09200	COG0640	Transcriptional regulator
J9319_09215	COG2761	dithiol-disulfide isomerase involved in polyketide biosynthesis
J9319_09220	COG1182	Catalyzes the reductive cleavage of azo bond in aromatic azo compounds to the corresponding amines. Requires NADH, but not NADPH, as an electron donor for its activity
J9319_09230	COG1309	transcriptional regulator
J9319_09235	COG2249	NAD(P)H dehydrogenase (quinone) activity
J9319_09240	COG1733	regulation of RNA biosynthetic process
J9319_09245	COG0031	Belongs to the cysteine synthase cystathionine beta- synthase family
J9319_09250	COG0251	oxidation-reduction process
J9319_09290	COG2761	dithiol-disulfide isomerase involved in polyketide biosynthesis
J9319_09310	COG0657	acetylesterase activity
J9319_09320	COG2723	6-phospho-beta-galactosidase activity
J9319_09325	COG1264	protein-N(PI)-phosphohistidine-sugar phosphotransferase activity
J9319_09325	COG1263	PTS System
J9319_09325	COG2190	(PTS) system
J9319_09340	COG2205	protein histidine kinase activity
J9319_09345	COG0745	RESPONSE REGULATOR receiver
J9319_09355	COG3507	Belongs to the glycosyl hydrolase 43 family
J9319_09360	COG1012	belongs to the aldehyde dehydrogenase family
J9319_09365	COG1486	melibiose metabolic process
J9319_09370	COG0395	ABC-type sugar transport system, permease component
J9319_09375	COG1175	transmembrane transport
J9319_09380	COG1653	transport
J9319_09385	COG1609	Transcriptional regulator
J9319_09390	COG0036	Belongs to the ribulose-phosphate 3-epimerase family
J9319_09405	COG1762	phosphoenolpyruvate-dependent sugar phosphotransferase system
J9319_09415	COG0456	acetyltransferase
J9319_09420	COG1167	Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain MocR family and their eukaryotic orthologs
J9319_09435	COG5444	nuclease activity
J9319_09445	COG1846	Transcriptional regulator
J9319_09450	COG2814	Major facilitator Superfamily
J9319_09460	COG1445	protein-N(PI)-phosphohistidine-fructose phosphotransferase system transporter activity
J9319_09460	COG1762	phosphoenolpyruvate-dependent sugar phosphotransferase system
J9319_09460	COG1299	protein-N(PI)-phosphohistidine-fructose phosphotransferase system transporter activity
J9319_09465	COG1299	protein-N(PI)-phosphohistidine-fructose phosphotransferase system transporter activity
J9319_09465	COG1445	protein-N(PI)-phosphohistidine-fructose phosphotransferase system transporter activity
J9319_09465	COG1762	phosphoenolpyruvate-dependent sugar phosphotransferase system
J9319_09470	COG1105	Belongs to the carbohydrate kinase PfkB family
J9319_09480	COG1502	Catalyzes the reversible phosphatidyl group transfer from one phosphatidylglycerol molecule to another to form cardiolipin (CL) (diphosphatidylglycerol) and glycerol
J9319_09500	COG1012	belongs to the aldehyde dehydrogenase family
J9319_09505	COG0369	Component of the sulfite reductase complex that catalyzes the 6-electron reduction of sulfite to sulfide. This is one of several activities required for the biosynthesis of L- cysteine from sulfate. The flavoprotein component catalyzes the electron flow from NADPH - FAD - FMN to the hemoprotein component
J9319_09510	COG0155	Belongs to the nitrite and sulfite reductase 4Fe-4S domain family
J9319_09515	COG0365	Catalyzes the conversion of acetate into acetyl-CoA (AcCoA), an essential intermediate at the junction of anabolic and catabolic pathways. AcsA undergoes a two-step reaction. In the first half reaction, AcsA combines acetate with ATP to form acetyl-adenylate (AcAMP) intermediate. In the second half reaction, it can then transfer the acetyl group from AcAMP to the sulfhydryl group of CoA, forming the product AcCoA
J9319_09520	COG4799	Acetyl-CoA carboxylase, carboxyltransferase component subunits alpha and beta
J9319_09525	COG1024	Enoyl-CoA hydratase
J9319_09530	COG0119	Catalyzes the condensation of the acetyl group of acetyl-CoA with 3-methyl-2-oxobutanoate (2-oxoisovalerate) to form 3-carboxy-3-hydroxy-4-methylpentanoate (2-isopropylmalate)
J9319_09535	COG0511	ligase activity, forming carbon-carbon bonds
J9319_09540	COG0439	Biotin carboxylase
J9319_09545	COG0318	PFAM AMP-dependent synthetase and ligase
J9319_09550	COG1960	acyl-CoA dehydrogenase activity
J9319_09555	COG1649	PFAM Uncharacterised BCR, COG1649
J9319_09560	COG2365	Tyrosine phosphatase family
J9319_09565	COG1349	DNA-binding transcription factor activity
J9319_09570	COG1942	4-Oxalocrotonate Tautomerase
J9319_09580	COG3835	regulator
J9319_09585	COG0277	FAD linked oxidase domain protein
J9319_09590	COG0247	lactate metabolic process
J9319_09610	COG0166	Belongs to the GPI family
J9319_09615	COG2246	polysaccharide biosynthetic process
J9319_09620	COG1210	Utp--glucose-1-phosphate uridylyltransferase
J9319_09625	COG0586	Pfam SNARE associated Golgi protein
J9319_09630	COG1587	Uroporphyrinogen-III synthase
J9319_09640	COG2141	COG2141 Coenzyme F420-dependent N5,N10-methylene tetrahydromethanopterin reductase and related flavin-dependent oxidoreductases
J9319_09655	COG0534	Mate efflux family protein
J9319_09660	COG2027	D-alanyl-D-alanine carboxypeptidase
J9319_09665	COG4677	pectinesterase activity
J9319_09670	COG2323	membrane
J9319_09675	COG2146	nitrite reductase [NAD(P)H] activity
J9319_09680	COG1251	Belongs to the nitrite and sulfite reductase 4Fe-4S domain family
J9319_09685	COG0243	molybdopterin cofactor binding
J9319_09690	COG1251	Belongs to the nitrite and sulfite reductase 4Fe-4S domain family
J9319_09695	COG2223	nitrite transmembrane transporter activity
J9319_09700	COG0493	'glutamate synthase
J9319_09705	COG0067	glutamate synthase
J9319_09705	COG0069	glutamate synthase activity
J9319_09705	COG0070	glutamate synthase
J9319_09710	COG0583	DNA-binding transcription factor activity
J9319_09720	COG1132	(ABC) transporter
J9319_09725	COG0789	Transcriptional regulator
J9319_09725	COG4978	Transcriptional regulator
J9319_09730	COG0454	-acetyltransferase
J9319_09735	COG0014	Catalyzes the NADPH-dependent reduction of L-glutamate 5-phosphate into L-glutamate 5-semialdehyde and phosphate. The product spontaneously undergoes cyclization to form 1-pyrroline-5- carboxylate
J9319_09740	COG0263	Catalyzes the transfer of a phosphate group to glutamate to form L-glutamate 5-phosphate
J9319_09745	COG0345	Catalyzes the reduction of 1-pyrroline-5-carboxylate (PCA) to L-proline
J9319_09755	COG0243	molybdopterin cofactor binding
J9319_09765	COG1070	Carbohydrate kinase
J9319_09770	COG2115	Belongs to the xylose isomerase family
J9319_09775	COG1940	carbohydrate kinase activity
J9319_09785	COG2211	Major facilitator Superfamily
J9319_09790	COG0073	Is required not only for elongation of protein synthesis but also for the initiation of all mRNA translation through initiator tRNA(fMet) aminoacylation
J9319_09795	COG1994	Peptidase M50
J9319_09815	COG1309	transcriptional regulator
J9319_09820	COG0491	Thiolesterase that catalyzes the hydrolysis of S-D- lactoyl-glutathione to form glutathione and D-lactic acid
J9319_09825	COG3708	Transcriptional regulator
J9319_09830	COG2378	regulation of single-species biofilm formation
J9319_09840	COG0640	Transcriptional regulator
J9319_09845	COG0531	amino acid
J9319_09850	COG0741	lytic transglycosylase activity
J9319_09855	COG2513	Catalyzes the thermodynamically favored C-C bond cleavage of (2R,3S)-2-methylisocitrate to yield pyruvate and succinate
J9319_09860	COG2079	MmgE PrpD family protein
J9319_09865	COG0372	Belongs to the citrate synthase family
J9319_09870	COG2322	membrane
J9319_09880	COG1388	LysM domain
J9319_09880	COG3584	3D domain protein
J9319_09885	COG0514	ATP-dependent DNA helicase (RecQ)
J9319_09895	COG1734	Transcription factor that acts by binding directly to the RNA polymerase (RNAP). Required for negative regulation of rRNA expression and positive regulation of several amino acid biosynthesis promoters
J9319_09920	COG1012	belongs to the aldehyde dehydrogenase family
J9319_09925	COG1657	PFAM Prenyltransferase squalene oxidase
J9319_09930	COG0605	Destroys radicals which are normally produced within the cells and which are toxic to biological systems
J9319_09935	COG0385	Bile acid
J9319_09940	COG0508	dehydrogenase complex catalyzes the overall conversion of
J9319_09945	COG0567	Dehydrogenase, E1 component
J9319_09950	COG4548	von Willebrand factor, type A
J9319_09955	COG0714	Associated with various cellular activities
J9319_09960	COG2032	superoxide dismutase activity
J9319_09965	COG0791	NLP P60 protein
J9319_09965	COG1388	LysM domain
J9319_09970	COG1624	Catalyzes the condensation of 2 ATP molecules into cyclic di-AMP (c-di-AMP), a second messenger used to regulate differing processes in different bacteria
J9319_09975	COG0534	Mate efflux family protein
J9319_09980	COG2120	A mycothiol (MSH, N-acetylcysteinyl-glucosaminyl- inositol) S-conjugate amidase, it recycles conjugated MSH to the N-acetyl cysteine conjugate (AcCys S-conjugate, a mercapturic acid) and the MSH precursor. Involved in MSH-dependent detoxification of a number of alkylating agents and antibiotics
J9319_09985	COG2120	A mycothiol (MSH, N-acetylcysteinyl-glucosaminyl- inositol) S-conjugate amidase, it recycles conjugated MSH to the N-acetyl cysteine conjugate (AcCys S-conjugate, a mercapturic acid) and the MSH precursor. Involved in MSH-dependent detoxification of a number of alkylating agents and antibiotics
J9319_09995	COG2962	Rard protein
J9319_10010	COG1733	regulation of RNA biosynthetic process
J9319_10015	COG0778	Nitroreductase
J9319_10025	COG0591	Belongs to the sodium solute symporter (SSF) (TC 2.A.21) family
J9319_10030	COG0793	Belongs to the peptidase S41A family
J9319_10030	COG3409	Peptidoglycan-binding domain 1 protein
J9319_10035	COG2226	methyltransferase
J9319_10045	COG1876	peptidase activity
J9319_10050	COG0813	purine-nucleoside phosphorylase activity
J9319_10060	COG0671	phosphoesterase, PA-phosphatase related
J9319_10080	COG4479	Belongs to the UPF0346 family
J9319_10090	COG1509	lysine 2,3-aminomutase activity
J9319_10095	COG3829	transcription factor binding
J9319_10100	COG0463	Glycosyl transferase, family 2
J9319_10115	COG4641	Protein conserved in bacteria
J9319_10125	COG1086	Polysaccharide biosynthesis protein
J9319_10130	COG0229	Has an important function as a repair enzyme for proteins that have been inactivated by oxidation. Catalyzes the reversible oxidation-reduction of methionine sulfoxide in proteins to methionine
J9319_10135	COG0225	Has an important function as a repair enzyme for proteins that have been inactivated by oxidation. Catalyzes the reversible oxidation-reduction of methionine sulfoxide in proteins to methionine
J9319_10140	COG1846	Transcriptional regulator
J9319_10160	COG4698	Protein conserved in bacteria
J9319_10165	COG2755	lipolytic protein G-D-S-L family
J9319_10170	COG1999	signal sequence binding
J9319_10185	COG1171	Catalyzes the anaerobic formation of alpha-ketobutyrate and ammonia from threonine in a two-step reaction. The first step involved a dehydration of threonine and a production of enamine intermediates (aminocrotonate), which tautomerizes to its imine form (iminobutyrate). Both intermediates are unstable and short- lived. The second step is the nonenzymatic hydrolysis of the enamine imine intermediates to form 2-ketobutyrate and free ammonia. In the low water environment of the cell, the second step is accelerated by RidA
J9319_10190	COG1221	Transcriptional regulators containing an AAA-type ATPase domain and a DNA-binding domain
J9319_10195	COG1272	protein, Hemolysin III
J9319_10200	COG0204	Acyl-transferase
J9319_10205	COG0262	Key enzyme in folate metabolism. Catalyzes an essential reaction for de novo glycine and purine synthesis, and for DNA precursor synthesis
J9319_10210	COG0207	Catalyzes the reductive methylation of 2'-deoxyuridine- 5'-monophosphate (dUMP) to 2'-deoxythymidine-5'-monophosphate (dTMP) while utilizing 5,10-methylenetetrahydrofolate (mTHF) as the methyl donor and reductant in the reaction, yielding dihydrofolate (DHF) as a by-product. This enzymatic reaction provides an intracellular de novo source of dTMP, an essential precursor for DNA biosynthesis
J9319_10215	COG1267	Lipid phosphatase which dephosphorylates phosphatidylglycerophosphate (PGP) to phosphatidylglycerol (PG)
J9319_10225	COG2521	methyltransferase
J9319_10225	COG2136	Putative SAM-dependent methyltransferase
J9319_10235	COG0129	dihydroxy-acid dehydratase activity
J9319_10240	COG1413	lyase activity
J9319_10245	COG1418	mRNA catabolic process
J9319_10250	COG0386	Belongs to the glutathione peroxidase family
J9319_10255	COG2759	Belongs to the formate--tetrahydrofolate ligase family
J9319_10260	COG1897	L-methionine biosynthetic process from homoserine via O-succinyl-L-homoserine and cystathionine
J9319_10265	COG0707	Cell wall formation. Catalyzes the transfer of a GlcNAc subunit on undecaprenyl-pyrophosphoryl-MurNAc-pentapeptide (lipid intermediate I) to form undecaprenyl-pyrophosphoryl-MurNAc- (pentapeptide)GlcNAc (lipid intermediate II)
J9319_10275	COG1278	Cold shock
J9319_10290	COG0328	RNA-DNA hybrid ribonuclease activity
J9319_10295	COG1738	Involved in the import of queuosine (Q) precursors, required for Q precursor salvage
J9319_10300	COG0328	RNA-DNA hybrid ribonuclease activity
J9319_10310	COG0258	In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity
J9319_10320	COG0699	ATPase. Has a role at an early stage in the morphogenesis of the spore coat
J9319_10330	COG1755	Isoprenylcysteine carboxyl methyltransferase
J9319_10335	COG3424	synthase
J9319_10340	COG0726	polysaccharide deacetylase
J9319_10345	COG2233	PERMEase
J9319_10350	COG0503	Catalyzes a salvage reaction resulting in the formation of AMP, that is energically less costly than de novo synthesis
J9319_10355	COG2317	Broad specificity carboxypetidase that releases amino acids sequentially from the C-terminus, including neutral, aromatic, polar and basic residues
J9319_10360	COG1199	ATP-dependent helicase activity
J9319_10370	COG0116	Belongs to the methyltransferase superfamily
J9319_10380	COG3599	regulation of cell shape
J9319_10385	COG4474	Belongs to the UPF0398 family
J9319_10395	COG3359	exonuclease
J9319_10400	COG1111	helicase
J9319_10400	COG1205	dead DEAH box helicase
J9319_10405	COG1902	pentaerythritol trinitrate reductase activity
J9319_10410	COG2190	(PTS) system
J9319_10415	COG0071	Belongs to the small heat shock protein (HSP20) family
J9319_10445	COG3331	DNA recombination
J9319_10450	COG0744	Peptidoglycan polymerase that catalyzes glycan chain elongation from lipid-linked precursors
J9319_10450	COG4499	WXG100 protein secretion system (Wss), protein YukC
J9319_10460	COG0177	DNA repair enzyme that has both DNA N-glycosylase activity and AP-lyase activity. The DNA N-glycosylase activity releases various damaged pyrimidines from DNA by cleaving the N- glycosidic bond, leaving an AP (apurinic apyrimidinic) site. The AP-lyase activity cleaves the phosphodiester bond 3' to the AP site by a beta-elimination, leaving a 3'-terminal unsaturated sugar and a product with a terminal 5'-phosphate
J9319_10465	COG3935	DnaD domain protein
J9319_10475	COG5353	protein conserved in bacteria
J9319_10485	COG1199	ATP-dependent helicase activity
J9319_10485	COG0847	DNA polymerase III is a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria. The epsilon subunit contain the editing function and is a proofreading 3'-5' exonuclease
J9319_10490	COG0853	Catalyzes the pyruvoyl-dependent decarboxylation of aspartate to produce beta-alanine
J9319_10495	COG0414	Catalyzes the condensation of pantoate with beta-alanine in an ATP-dependent reaction via a pantoyl-adenylate intermediate
J9319_10500	COG0413	3-methyl-2-oxobutanoate hydroxymethyltransferase activity
J9319_10510	COG0617	tRNA 3'-terminal CCA addition
J9319_10515	COG0438	transferase activity, transferring glycosyl groups
J9319_10520	COG2120	A mycothiol (MSH, N-acetylcysteinyl-glucosaminyl- inositol) S-conjugate amidase, it recycles conjugated MSH to the N-acetyl cysteine conjugate (AcCys S-conjugate, a mercapturic acid) and the MSH precursor. Involved in MSH-dependent detoxification of a number of alkylating agents and antibiotics
J9319_10525	COG1803	Methylglyoxal synthase
J9319_10530	COG0289	4-hydroxy-tetrahydrodipicolinate reductase
J9319_10535	COG1694	Mazg nucleotide pyrophosphohydrolase
J9319_10540	COG1284	Uncharacterised 5xTM membrane BCR, YitT family COG1284
J9319_10550	COG4347	Protein of unknown function (DUF1405)
J9319_10555	COG1290	Component of the ubiquinol-cytochrome c reductase complex (complex III or cytochrome b-c1 complex), which is a respiratory chain that generates an electrochemical potential coupled to ATP synthesis
J9319_10555	COG2010	Cytochrome c
J9319_10560	COG1290	Component of the ubiquinol-cytochrome c reductase complex (complex III or cytochrome b-c1 complex), which is a respiratory chain that generates an electrochemical potential coupled to ATP synthesis
J9319_10565	COG0723	plastoquinol--plastocyanin reductase activity
J9319_10575	COG5582	Belongs to the UPF0302 family
J9319_10580	COG0457	Tetratricopeptide repeat
J9319_10585	COG0128	3-phosphoshikimate 1-carboxyvinyltransferase activity
J9319_10590	COG0287	Prephenate dehydrogenase
J9319_10595	COG0079	Belongs to the class-II pyridoxal-phosphate-dependent aminotransferase family. Histidinol-phosphate aminotransferase subfamily
J9319_10600	COG0159	tryptophan synthase activity
J9319_10605	COG0133	tryptophan synthase activity
J9319_10610	COG0135	phosphoribosylanthranilate isomerase activity
J9319_10615	COG0134	indole-3-glycerol-phosphate synthase activity
J9319_10620	COG0547	Catalyzes the transfer of the phosphoribosyl group of 5- phosphorylribose-1-pyrophosphate (PRPP) to anthranilate to yield N-(5'-phosphoribosyl)-anthranilate (PRA)
J9319_10630	COG4401	Chorismate mutase type I
J9319_10635	COG0337	Catalyzes the conversion of 3-deoxy-D-arabino- heptulosonate 7-phosphate (DAHP) to dehydroquinate (DHQ)
J9319_10640	COG0082	Catalyzes the anti-1,4-elimination of the C-3 phosphate and the C-6 proR hydrogen from 5-enolpyruvylshikimate-3-phosphate (EPSP) to yield chorismate, which is the branch point compound that serves as the starting substrate for the three terminal pathways of aromatic amino acid biosynthesis. This reaction introduces a second double bond into the aromatic ring system
J9319_10645	COG1352	Methylation of the membrane-bound methyl-accepting chemotaxis proteins (MCP) to form gamma-glutamyl methyl ester residues in MCP
J9319_10650	COG0105	UTP biosynthetic process
J9319_10655	COG0142	geranyltranstransferase activity
J9319_10660	COG2226	methyltransferase
J9319_10665	COG0142	geranyltranstransferase activity
J9319_10675	COG0302	gtp cyclohydrolase
J9319_10680	COG0776	regulation of translation
J9319_10685	COG0699	ATPase. Has a role at an early stage in the morphogenesis of the spore coat
J9319_10700	COG0240	glycerol-3-phosphate dehydrogenase [NAD(P)+] activity
J9319_10705	COG1160	GTP binding
J9319_10730	COG1304	FMN binding
J9319_10735	COG0539	negative regulation of cytoplasmic translation
J9319_10740	COG0283	belongs to the cytidylate kinase family. Type 1 subfamily
J9319_10750	COG5581	Acts as a flagellar brake, regulating swimming and swarming in a bis-(3'-5') cyclic diguanylic acid (c-di-GMP)- dependent manner. Binds 1 c-di-GMP dimer per subunit. Increasing levels of c-di-GMP lead to decreased motility
J9319_10755	COG2959	enzyme of heme biosynthesis
J9319_10760	COG3773	Cell wall hydrolase
J9319_10760	COG3409	Peptidoglycan-binding domain 1 protein
J9319_10765	COG2339	peptidase activity
J9319_10770	COG0492	ferredoxin-NADP+ reductase activity
J9319_10775	COG0334	Belongs to the Glu Leu Phe Val dehydrogenases family
J9319_10780	COG4862	establishment of competence for transformation
J9319_10785	COG1408	metallophosphoesterase
J9319_10795	COG1388	LysM domain
J9319_10800	COG1266	CAAX protease self-immunity
J9319_10805	COG0514	ATP-dependent DNA helicase (RecQ)
J9319_10810	COG4955	Helix-turn-helix domain
J9319_10815	COG1141	Ferredoxin
J9319_10820	COG3601	Mediates riboflavin uptake, may also transport FMN and roseoflavin. Probably a riboflavin-binding protein that interacts with the energy-coupling factor (ECF) ABC-transporter complex. Unlike classic ABC transporters this ECF transporter provides the energy necessary to transport a number of different substrates. The substrates themselves are bound by transmembrane, not extracytoplasmic soluble proteins
J9319_10825	COG0111	D-isomer specific 2-hydroxyacid dehydrogenase
J9319_10840	COG1595	DNA-templated transcription, initiation
J9319_10845	COG5002	protein histidine kinase activity
J9319_10850	COG0745	RESPONSE REGULATOR receiver
J9319_10855	COG0755	Required for the export of heme to the periplasm for the biogenesis of c-type cytochromes
J9319_10860	COG1333	cytochrome c biogenesis protein
J9319_10865	COG0526	COG0526, thiol-disulfide isomerase and thioredoxins
J9319_10870	COG1187	pseudouridine synthase activity
J9319_10875	COG0700	Nucleoside recognition
J9319_10880	COG2715	membrane protein required for spore maturation
J9319_10885	COG1686	Belongs to the peptidase S11 family
J9319_10895	COG1386	Participates in chromosomal partition during cell division. May act via the formation of a condensin-like complex containing Smc and ScpA that pull DNA away from mid-cell into both cell halves
J9319_10900	COG1354	Participates in chromosomal partition during cell division. May act via the formation of a condensin-like complex containing Smc and ScpB that pull DNA away from mid-cell into both cell halves
J9319_10910	COG1547	Domain of unknown function (DUF309)
J9319_10915	COG0456	acetyltransferase
J9319_10920	COG0054	6,7-dimethyl-8-ribityllumazine synthase activity
J9319_10925	COG0108	Catalyzes the conversion of D-ribulose 5-phosphate to formate and 3,4-dihydroxy-2-butanone 4-phosphate
J9319_10925	COG0807	Catalyzes the conversion of D-ribulose 5-phosphate to formate and 3,4-dihydroxy-2-butanone 4-phosphate
J9319_10930	COG0307	riboflavin synthase, alpha
J9319_10950	COG2814	Major facilitator Superfamily
J9319_10955	COG0652	PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides
J9319_10960	COG4086	secreted protein
J9319_10965	COG0019	diaminopimelate decarboxylase activity
J9319_10970	COG0697	spore germination
J9319_10985	COG0332	Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP. Catalyzes the first condensation reaction which initiates fatty acid synthesis and may therefore play a role in governing the total rate of fatty acid production. Possesses both acetoacetyl-ACP synthase and acetyl transacylase activities. Its substrate specificity determines the biosynthesis of branched- chain and or straight-chain of fatty acids
J9319_11005	COG1191	sigma factor activity
J9319_11010	COG2172	sigma factor antagonist activity
J9319_11020	COG1686	Belongs to the peptidase S11 family
J9319_11025	COG0005	The purine nucleoside phosphorylases catalyze the phosphorolytic breakdown of the N-glycosidic bond in the beta- (deoxy)ribonucleoside molecules, with the formation of the corresponding free purine bases and pentose-1-phosphate
J9319_11030	COG1015	Phosphotransfer between the C1 and C5 carbon atoms of pentose
J9319_11035	COG4974	Belongs to the 'phage' integrase family
J9319_11045	COG0735	belongs to the Fur family
J9319_11050	COG1300	Membrane
J9319_11055	COG1404	Belongs to the peptidase S8 family
J9319_11065	COG2153	protein acetylation
J9319_11070	COG1379	DNA repair
J9319_11075	COG0494	nUDIX hydrolase
J9319_11080	COG0667	Aldo Keto reductase
J9319_11095	COG1073	alpha beta
J9319_11100	COG0457	Tetratricopeptide repeat
J9319_11110	COG4918	Iron-sulphur cluster biosynthesis
J9319_11115	COG4305	rare lipoprotein A
J9319_11120	COG2320	Catalyzes the phosphorylation of the 3'-hydroxyl group of dephosphocoenzyme A to form coenzyme A
J9319_11120	COG0456	acetyltransferase
J9319_11125	COG0456	acetyltransferase
J9319_11135	COG0389	Poorly processive, error-prone DNA polymerase involved in untargeted mutagenesis. Copies undamaged DNA at stalled replication forks, which arise in vivo from mismatched or misaligned primer ends. These misaligned primers can be extended by PolIV. Exhibits no 3'-5' exonuclease (proofreading) activity. May be involved in translesional synthesis, in conjunction with the beta clamp from PolIII
J9319_11145	COG2211	Major facilitator Superfamily
J9319_11150	COG1072	(Pantothenic acid kinase))
J9319_11155	COG0446	pyridine nucleotide-disulphide oxidoreductase
J9319_11165	COG0300	oxidoreductase activity
J9319_11170	COG0491	Thiolesterase that catalyzes the hydrolysis of S-D- lactoyl-glutathione to form glutathione and D-lactic acid
J9319_11175	COG0345	Catalyzes the reduction of 1-pyrroline-5-carboxylate (PCA) to L-proline
J9319_11185	COG4187	Peptidase family M20/M25/M40
J9319_11190	COG1902	pentaerythritol trinitrate reductase activity
J9319_11195	COG0596	Alpha beta hydrolase
J9319_11200	COG1167	Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain MocR family and their eukaryotic orthologs
J9319_11210	COG0364	Catalyzes the oxidation of glucose 6-phosphate to 6- phosphogluconolactone
J9319_11215	COG2188	Transcriptional regulator
J9319_11220	COG2723	6-phospho-beta-galactosidase activity
J9319_11225	COG1455	protein-N(PI)-phosphohistidine-lactose phosphotransferase system transporter activity
J9319_11230	COG1447	Phosphotransferase system cellobiose-specific component IIA
J9319_11235	COG1440	protein-N(PI)-phosphohistidine-lactose phosphotransferase system transporter activity
J9319_11245	COG1028	Short-chain dehydrogenase reductase Sdr
J9319_11255	COG0362	Catalyzes the oxidative decarboxylation of 6- phosphogluconate to ribulose 5-phosphate and CO(2), with concomitant reduction of NADP to NADPH
J9319_11260	COG0389	Poorly processive, error-prone DNA polymerase involved in untargeted mutagenesis. Copies undamaged DNA at stalled replication forks, which arise in vivo from mismatched or misaligned primer ends. These misaligned primers can be extended by PolIV. Exhibits no 3'-5' exonuclease (proofreading) activity. May be involved in translesional synthesis, in conjunction with the beta clamp from PolIII
J9319_11270	COG0706	membrane insertase activity
J9319_11275	COG0835	chemotaxis
J9319_11280	COG2195	Cleaves the N-terminal amino acid of tripeptides
J9319_11285	COG4799	Acetyl-CoA carboxylase, carboxyltransferase component subunits alpha and beta
J9319_11290	COG0346	lactoylglutathione lyase activity
J9319_11300	COG1376	ErfK ybiS ycfS ynhG family protein
J9319_11305	COG4129	membrane
J9319_11310	COG1126	abc transporter atp-binding protein
J9319_11315	COG0765	amino acid transport
J9319_11320	COG0834	ABC-type amino acid transport signal transduction systems periplasmic component domain
J9319_11330	COG1597	lipid kinase activity
J9319_11340	COG0508	dehydrogenase complex catalyzes the overall conversion of
J9319_11345	COG0022	dehydrogenase e1 component
J9319_11350	COG1071	oxidoreductase activity, acting on the aldehyde or oxo group of donors, disulfide as acceptor
J9319_11355	COG1249	Belongs to the class-I pyridine nucleotide-disulfide oxidoreductase family
J9319_11360	COG3426	butyrate kinase activity
J9319_11365	COG0334	Belongs to the Glu Leu Phe Val dehydrogenases family
J9319_11370	COG0280	phosphate acetyltransferase
J9319_11375	COG3290	protein histidine kinase activity
J9319_11375	COG3829	transcription factor binding
J9319_11385	COG0584	glycerophosphoryl diester phosphodiesterase
J9319_11390	COG0457	Tetratricopeptide repeat
J9319_11395	COG0745	RESPONSE REGULATOR receiver
J9319_11400	COG0750	zinc metalloprotease
J9319_11405	COG0497	DNA recombination
J9319_11410	COG1438	arginine binding
J9319_11415	COG1189	Ribosomal RNA methyltransferase RrmJ FtsJ
J9319_11420	COG1154	Catalyzes the acyloin condensation reaction between C atoms 2 and 3 of pyruvate and glyceraldehyde 3-phosphate to yield 1-deoxy-D-xylulose-5-phosphate (DXP)
J9319_11425	COG0142	geranyltranstransferase activity
J9319_11430	COG1722	exodeoxyribonuclease VII activity
J9319_11435	COG1570	exodeoxyribonuclease VII activity
J9319_11440	COG0190	Catalyzes the oxidation of 5,10- methylenetetrahydrofolate to 5,10-methenyltetrahydrofolate and then the hydrolysis of 5,10-methenyltetrahydrofolate to 10- formyltetrahydrofolate
J9319_11445	COG0781	Involved in transcription antitermination. Required for transcription of ribosomal RNA (rRNA) genes. Binds specifically to the boxA antiterminator sequence of the ribosomal RNA (rrn) operons
J9319_11450	COG1302	Protein conserved in bacteria
J9319_11455	COG0439	Biotin carboxylase
J9319_11460	COG0511	ligase activity, forming carbon-carbon bonds
J9319_11500	COG3854	ATPases associated with a variety of cellular activities
J9319_11510	COG0231	Involved in peptide bond synthesis. Stimulates efficient translation and peptide-bond synthesis on native or reconstituted 70S ribosomes in vitro. Probably functions indirectly by altering the affinity of the ribosome for aminoacyl-tRNA, thus increasing their reactivity as acceptors for peptidyl transferase
J9319_11515	COG0006	proline dipeptidase activity
J9319_11520	COG0757	Catalyzes a trans-dehydration via an enolate intermediate
J9319_11530	COG3872	metal-dependent enzyme
J9319_11540	COG1752	Esterase of the alpha-beta hydrolase superfamily
J9319_11545	COG1321	iron dependent repressor
J9319_11550	COG0095	Lipoate-protein ligase
J9319_11555	COG0607	Catalyzes the ATP-dependent transfer of a sulfur to tRNA to produce 4-thiouridine in position 8 of tRNAs, which functions as a near-UV photosensor. Also catalyzes the transfer of sulfur to the sulfur carrier protein ThiS, forming ThiS-thiocarboxylate. This is a step in the synthesis of thiazole, in the thiamine biosynthesis pathway. The sulfur is donated as persulfide by IscS
J9319_11560	COG1003	The glycine cleavage system catalyzes the degradation of glycine. The P protein binds the alpha-amino group of glycine through its pyridoxal phosphate cofactor
J9319_11565	COG0403	The glycine cleavage system catalyzes the degradation of glycine. The P protein binds the alpha-amino group of glycine through its pyridoxal phosphate cofactor
J9319_11570	COG0404	The glycine cleavage system catalyzes the degradation of glycine
J9319_11575	COG0553	Transcription regulator that activates transcription by stimulating RNA polymerase (RNAP) recycling in case of stress conditions such as supercoiled DNA or high salt concentrations. Probably acts by releasing the RNAP, when it is trapped or immobilized on tightly supercoiled DNA. Does not activate transcription on linear DNA. Probably not involved in DNA repair
J9319_11600	COG0681	Belongs to the peptidase S26 family
J9319_11635	COG4970	Tfp pilus assembly protein FimT
J9319_11640	COG4537	Required for transformation and DNA binding
J9319_11645	COG1459	type II secretion system
J9319_11650	COG2804	Type II secretory pathway, ATPase PulE Tfp pilus assembly pathway, ATPase PilB
J9319_11655	COG1366	Belongs to the anti-sigma-factor antagonist family
J9319_11665	COG1393	Belongs to the ArsC family
J9319_11675	COG0491	Thiolesterase that catalyzes the hydrolysis of S-D- lactoyl-glutathione to form glutathione and D-lactic acid
J9319_11685	COG0011	TIGRFAM Protein of
J9319_11690	COG2814	Major facilitator Superfamily
J9319_11695	COG2866	Carboxypeptidase
J9319_11700	COG1368	sulfuric ester hydrolase activity
J9319_11705	COG1940	carbohydrate kinase activity
J9319_11710	COG4483	Protein conserved in bacteria
J9319_11715	COG0705	Rhomboid family
J9319_11715	COG0457	Tetratricopeptide repeat
J9319_11730	COG0212	Belongs to the 5-formyltetrahydrofolate cyclo-ligase family
J9319_11735	COG0267	Belongs to the bacterial ribosomal protein bL33 family
J9319_11745	COG1559	Functions as a peptidoglycan terminase that cleaves nascent peptidoglycan strands endolytically to terminate their elongation
J9319_11750	COG1117	ATPase-coupled phosphate ion transmembrane transporter activity
J9319_11755	COG1117	ATPase-coupled phosphate ion transmembrane transporter activity
J9319_11760	COG0581	inorganic phosphate transmembrane transporter activity
J9319_11765	COG0573	inorganic phosphate transmembrane transporter activity
J9319_11770	COG0226	Part of the ABC transporter complex PstSACB involved in phosphate import
J9319_11775	COG0768	penicillin binding
J9319_11780	COG0477	Major facilitator Superfamily
J9319_11785	COG0605	Destroys radicals which are normally produced within the cells and which are toxic to biological systems
J9319_11790	COG2839	Protein conserved in bacteria
J9319_11795	COG5521	maltodextrose utilization protein MalA
J9319_11800	COG1670	COG1670 acetyltransferases, including N-acetylases of ribosomal proteins
J9319_11805	COG1388	LysM domain
J9319_11810	COG0821	Converts 2C-methyl-D-erythritol 2,4-cyclodiphosphate (ME-2,4cPP) into 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate
J9319_11815	COG4709	membrane
J9319_11820	COG5663	Belongs to the 5'(3')-deoxyribonucleotidase family
J9319_11825	COG1940	carbohydrate kinase activity
J9319_11830	COG0735	belongs to the Fur family
J9319_11835	COG1108	ABC-type Mn2 Zn2 transport systems permease components
J9319_11840	COG1121	(ABC) transporter
J9319_11845	COG1284	Uncharacterised 5xTM membrane BCR, YitT family COG1284
J9319_11860	COG0513	Belongs to the DEAD box helicase family
J9319_11870	COG0761	Catalyzes the conversion of 1-hydroxy-2-methyl-2-(E)- butenyl 4-diphosphate (HMBPP) into a mixture of isopentenyl diphosphate (IPP) and dimethylallyl diphosphate (DMAPP). Acts in the terminal step of the DOXP MEP pathway for isoprenoid precursor biosynthesis
J9319_11875	COG0327	Belongs to the GTP cyclohydrolase I type 2 NIF3 family
J9319_11880	COG2384	SAM-dependent methyltransferase
J9319_11885	COG2010	Cytochrome c
J9319_11890	COG0568	sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released
J9319_11895	COG0358	DNA primase activity
J9319_11900	COG1671	Belongs to the UPF0178 family
J9319_11905	COG1806	Bifunctional serine threonine kinase and phosphorylase involved in the regulation of the
J9319_11910	COG0517	IMP dehydrogenase activity
J9319_11915	COG0751	glycine-tRNA ligase activity
J9319_11920	COG0752	glycyl-tRNA synthetase alpha subunit
J9319_11925	COG1381	Involved in DNA repair and RecF pathway recombination
J9319_11935	COG1159	An essential GTPase that binds both GDP and GTP, with rapid nucleotide exchange. Plays a role in 16S rRNA processing and 30S ribosomal subunit biogenesis and possibly also in cell cycle regulation and energy metabolism
J9319_11940	COG0295	cytidine deaminase activity
J9319_11945	COG0818	Recycling of diacylglycerol produced during the turnover of membrane phospholipid
J9319_11950	COG0319	Single strand-specific metallo-endoribonuclease involved in late-stage 70S ribosome quality control and in maturation of the 3' terminus of the 16S rRNA
J9319_11955	COG1480	7TM receptor with intracellular HD hydrolase
J9319_11960	COG1702	phosphate starvation-inducible protein PhoH
J9319_11965	COG0561	phosphatase activity
J9319_11980	COG4864	UPF0365 protein
J9319_11985	COG1030	water channel activity
J9319_11990	COG1610	YqeY-like protein
J9319_12000	COG1283	sodium-dependent phosphate transmembrane transporter activity
J9319_12005	COG0621	Catalyzes the methylthiolation of N6- (dimethylallyl)adenosine (i(6)A), leading to the formation of 2- methylthio-N6-(dimethylallyl)adenosine (ms(2)i(6)A) at position 37 in tRNAs that read codons beginning with uridine
J9319_12010	COG1385	rRNA (uridine-N3-)-methyltransferase activity
J9319_12015	COG2264	protein methyltransferase activity
J9319_12020	COG0484	heat shock protein binding
J9319_12025	COG0443	Heat shock 70 kDa protein
J9319_12030	COG0576	Participates actively in the response to hyperosmotic and heat shock by preventing the aggregation of stress-denatured proteins, in association with DnaK and GrpE. It is the nucleotide exchange factor for DnaK and may function as a thermosensor. Unfolded proteins bind initially to DnaJ
J9319_12035	COG1420	regulation of RNA biosynthetic process
J9319_12040	COG0635	Involved in the biosynthesis of porphyrin-containing compound
J9319_12045	COG0481	GTPase activity
J9319_12055	COG0860	N-Acetylmuramoyl-L-alanine amidase
J9319_12060	COG0680	Initiates the rapid degradation of small, acid-soluble proteins during spore germination
J9319_12065	COG0268	Binds directly to 16S ribosomal RNA
J9319_12070	COG1466	dna polymerase III delta subunit
J9319_12080	COG0658	competence protein
J9319_12080	COG2333	competence protein COMEC
J9319_12085	COG2131	deaminase
J9319_12090	COG1555	photosystem II stabilization
J9319_12090	COG1596	polysaccharide export
J9319_12095	COG0345	Catalyzes the reduction of 1-pyrroline-5-carboxylate (PCA) to L-proline
J9319_12100	COG2226	methyltransferase
J9319_12105	COG0799	negative regulation of ribosome biogenesis
J9319_12110	COG1713	HD superfamily hydrolase involved in NAD metabolism
J9319_12115	COG1057	Catalyzes the reversible adenylation of nicotinate mononucleotide (NaMN) to nicotinic acid adenine dinucleotide (NaAD)
J9319_12120	COG1534	Rna-binding protein
J9319_12125	COG0169	Involved in the biosynthesis of the chorismate, which leads to the biosynthesis of aromatic amino acids. Catalyzes the reversible NADPH linked reduction of 3-dehydroshikimate (DHSA) to yield shikimate (SA)
J9319_12130	COG1161	Required for a late step of 50S ribosomal subunit assembly. Has GTPase activity
J9319_12135	COG2179	HAD superfamily (subfamily IIIA) phosphatase, TIGR01668
J9319_12150	COG2755	lipolytic protein G-D-S-L family
J9319_12160	COG0457	Tetratricopeptide repeat
J9319_12200	COG1396	sequence-specific DNA binding
J9319_12210	COG2856	Zn peptidase
J9319_12230	COG2186	Transcriptional regulator
J9319_12245	COG1028	Short-chain dehydrogenase reductase Sdr
J9319_12250	COG3958	Transketolase
J9319_12255	COG3959	Transketolase, thiamine diphosphate binding domain
J9319_12275	COG0726	polysaccharide deacetylase
J9319_12310	COG1122	ATPase activity
J9319_12335	COG2160	L-arabinose isomerase activity
J9319_12350	COG1609	Transcriptional regulator
J9319_12370	COG0794	Belongs to the SIS family. GutQ KpsF subfamily
J9319_12375	COG0269	3-dehydro-L-gulonate-6-phosphate decarboxylase activity
J9319_12380	COG1733	regulation of RNA biosynthetic process
J9319_12385	COG0657	acetylesterase activity
J9319_12445	COG2602	Beta-lactamase
J9319_12450	COG1960	acyl-CoA dehydrogenase activity
J9319_12455	COG1126	abc transporter atp-binding protein
J9319_12460	COG0834	ABC-type amino acid transport signal transduction systems periplasmic component domain
J9319_12465	COG0765	amino acid transport
J9319_12475	COG3546	catalase activity
J9319_12480	COG1063	alcohol dehydrogenase
J9319_12490	COG1028	Short-chain dehydrogenase reductase Sdr
J9319_12500	COG1115	amino acid carrier protein
J9319_12505	COG0583	DNA-binding transcription factor activity
J9319_12510	COG0842	Transport permease protein
J9319_12520	COG1131	(ABC) transporter
J9319_12525	COG1063	alcohol dehydrogenase
J9319_12530	COG2226	methyltransferase
J9319_12555	COG0626	cystathionine gamma-synthase activity
J9319_12560	COG0031	Belongs to the cysteine synthase cystathionine beta- synthase family
J9319_12565	COG0775	Catalyzes the irreversible cleavage of the glycosidic bond in both 5'-methylthioadenosine (MTA) and S- adenosylhomocysteine (SAH AdoHcy) to adenine and the corresponding thioribose, 5'-methylthioribose and S-ribosylhomocysteine, respectively
J9319_12570	COG2226	methyltransferase
J9319_12585	COG0768	penicillin binding
J9319_12590	COG0782	Necessary for efficient RNA polymerase transcription elongation past template-encoded arresting sites. The arresting sites in DNA have the property of trapping a certain fraction of elongating RNA polymerases that pass through, resulting in locked ternary complexes. Cleavage of the nascent transcript by cleavage factors such as GreA or GreB allows the resumption of elongation from the new 3'terminus
J9319_12595	COG0572	uridine kinase
J9319_12600	COG0826	peptidase U32
J9319_12605	COG0826	peptidase U32
J9319_12610	COG4122	O-methyltransferase activity
J9319_12615	COG1559	Functions as a peptidoglycan terminase that cleaves nascent peptidoglycan strands endolytically to terminate their elongation
J9319_12620	COG0183	Belongs to the thiolase family
J9319_12625	COG0318	PFAM AMP-dependent synthetase and ligase
J9319_12630	COG1268	BioY protein
J9319_12640	COG3906	Belongs to the UPF0473 family
J9319_12645	COG0816	Could be a nuclease involved in processing of the 5'-end of pre-16S rRNA
J9319_12650	COG4472	Bacterial protein of unknown function (DUF965)
J9319_12655	COG0013	Catalyzes the attachment of alanine to tRNA(Ala) in a two-step reaction alanine is first activated by ATP to form Ala- AMP and then transferred to the acceptor end of tRNA(Ala). Also edits incorrectly charged Ser-tRNA(Ala) and Gly-tRNA(Ala) via its editing domain
J9319_12660	COG0628	permease
J9319_12665	COG1126	abc transporter atp-binding protein
J9319_12670	COG0834	ABC-type amino acid transport signal transduction systems periplasmic component domain
J9319_12675	COG0765	amino acid transport
J9319_12680	COG0765	amino acid transport
J9319_12695	COG3881	PFAM PRC-barrel domain
J9319_12700	COG0507	A helicase nuclease that prepares dsDNA breaks (DSB) for recombinational DNA repair. Binds to DSBs and unwinds DNA via a highly rapid and processive ATP-dependent bidirectional helicase activity. Unwinds dsDNA until it encounters a Chi (crossover hotspot instigator) sequence from the 3' direction. Cuts ssDNA a few nucleotides 3' to the Chi site. The properties and activities of the enzyme are changed at Chi. The Chi-altered holoenzyme produces a long 3'-ssDNA overhang and facilitates RecA-binding to the ssDNA for homologous DNA recombination and repair. Holoenzyme degrades any linearized DNA that is unable to undergo homologous recombination. In the holoenzyme this subunit has ssDNA-dependent ATPase and 5'-3' helicase activity. When added to pre-assembled RecBC greatly stimulates nuclease activity and augments holoenzyme processivity. Negatively regulates the RecA-loading ability of RecBCD
J9319_12705	COG0457	Tetratricopeptide repeat
J9319_12710	COG0482	sulfurtransferase activity
J9319_12715	COG1104	cysteine desulfurase activity
J9319_12720	COG1959	2 iron, 2 sulfur cluster binding
J9319_12725	COG2256	atpase related to the helicase subunit of the holliday junction resolvase
J9319_12730	COG1179	involved in molybdopterin and THIamine biosynthesis family 1
J9319_12745	COG0124	histidyl-tRNA synthetase
J9319_12755	COG4991	sh3 domain protein
J9319_12755	COG3103	Sh3 type 3 domain protein
J9319_12755	COG0860	N-Acetylmuramoyl-L-alanine amidase
J9319_12760	COG1490	D-aminoacyl-tRNA deacylase activity
J9319_12765	COG0317	In eubacteria ppGpp (guanosine 3'-diphosphate 5-' diphosphate) is a mediator of the stringent response that coordinates a variety of cellular activities in response to changes in nutritional abundance
J9319_12770	COG0503	Catalyzes a salvage reaction resulting in the formation of AMP, that is energically less costly than de novo synthesis
J9319_12775	COG4199	Single-strand DNA-specific exonuclease, C terminal domain
J9319_12775	COG0608	single-stranded DNA 5'-3' exodeoxyribonuclease activity
J9319_12780	COG5416	Lipopolysaccharide assembly protein A domain
J9319_12785	COG0490	domain, Protein
J9319_12790	COG0341	Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. SecDF uses the proton motive force (PMF) to complete protein translocation after the ATP-dependent function of SecA
J9319_12790	COG0342	Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. SecDF uses the proton motive force (PMF) to complete protein translocation after the ATP-dependent function of SecA
J9319_12800	COG2244	polysaccharide biosynthetic process
J9319_12805	COG2323	membrane
J9319_12815	COG1862	Preprotein translocase
J9319_12820	COG0343	queuine tRNA-ribosyltransferase activity
J9319_12825	COG0809	Transfers and isomerizes the ribose moiety from AdoMet to the 7-aminomethyl group of 7-deazaguanine (preQ1-tRNA) to give epoxyqueuosine (oQ-tRNA)
J9319_12835	COG2255	four-way junction helicase activity
J9319_12840	COG0632	four-way junction helicase activity
J9319_12850	COG2112	serine threonine protein kinase
J9319_12865	COG0422	Catalyzes the synthesis of the hydroxymethylpyrimidine phosphate (HMP-P) moiety of thiamine from aminoimidazole ribotide (AIR) in a radical S-adenosyl-L-methionine (SAM)-dependent reaction
J9319_12880	COG1388	LysM domain
J9319_12885	COG0379	Catalyzes the condensation of iminoaspartate with dihydroxyacetone phosphate to form quinolinate
J9319_12890	COG0157	Belongs to the NadC ModD family
J9319_12895	COG0029	Catalyzes the oxidation of L-aspartate to iminoaspartate
J9319_12900	COG1104	cysteine desulfurase activity
J9319_12905	COG1827	regulation of RNA biosynthetic process
J9319_12910	COG0077	Prephenate dehydratase
J9319_12915	COG4492	Belongs to the UPF0735 family
J9319_12920	COG0536	An essential GTPase which binds GTP, GDP and possibly (p)ppGpp with moderate affinity, with high nucleotide exchange rates and a fairly low GTP hydrolysis rate. Plays a role in control of the cell cycle, stress response, ribosome biogenesis and in those bacteria that undergo differentiation, in morphogenesis control
J9319_12925	COG3290	protein histidine kinase activity
J9319_12930	COG0211	Belongs to the bacterial ribosomal protein bL27 family
J9319_12935	COG2868	ribosomal protein
J9319_12940	COG0261	This protein binds to 23S rRNA in the presence of protein L20
J9319_12945	COG1994	Peptidase M50
J9319_12950	COG0739	heme binding
J9319_12955	COG2894	cell division
J9319_12960	COG0850	regulation of cytokinetic process
J9319_12965	COG2891	Involved in formation of the rod shape of the cell. May also contribute to regulation of formation of penicillin-binding proteins
J9319_12975	COG1077	Cell shape determining protein MreB Mrl
J9319_12980	COG2003	Belongs to the UPF0758 family
J9319_12985	COG0424	maF-like protein
J9319_13000	COG0285	dihydrofolate synthase activity
J9319_13005	COG0525	valine-tRNA ligase activity
J9319_13015	COG2334	A protein kinase that phosphorylates Ser and Thr residues. Probably acts to suppress the effects of stress linked to accumulation of reactive oxygen species. Probably involved in the extracytoplasmic stress response
J9319_13020	COG1388	LysM domain
J9319_13025	COG0001	glutamate-1-semialdehyde 2,1-aminomutase activity
J9319_13030	COG0113	porphobilinogen synthase activity
J9319_13035	COG1587	Uroporphyrinogen-III synthase
J9319_13040	COG0181	hydroxymethylbilane synthase activity
J9319_13045	COG0755	Required for the export of heme to the periplasm for the biogenesis of c-type cytochromes
J9319_13050	COG0373	Catalyzes the NADPH-dependent reduction of glutamyl- tRNA(Glu) to glutamate 1-semialdehyde (GSA)
J9319_13060	COG0218	Necessary for normal cell division and for the maintenance of normal septation
J9319_13065	COG0466	ATP-dependent serine protease that mediates the selective degradation of mutant and abnormal proteins as well as certain short-lived regulatory proteins. Required for cellular homeostasis and for survival from DNA damage and developmental changes induced by stress. Degrades polypeptides processively to yield small peptide fragments that are 5 to 10 amino acids long. Binds to DNA in a double-stranded, site-specific manner
J9319_13070	COG1067	ATP-dependent peptidase activity
J9319_13070	COG0470	DNA polymerase III
J9319_13075	COG1219	ATP-dependent specificity component of the Clp protease. It directs the protease to specific substrates. Can perform chaperone functions in the absence of ClpP
J9319_13080	COG0544	peptidyl-prolyl cis-trans isomerase activity
J9319_13085	COG0457	Tetratricopeptide repeat
J9319_13085	COG1477	protein flavinylation
J9319_13090	COG0066	3-isopropylmalate dehydratase activity
J9319_13095	COG0065	Catalyzes the isomerization between 2-isopropylmalate and 3-isopropylmalate, via the formation of 2-isopropylmaleate
J9319_13100	COG0473	3-isopropylmalate dehydrogenase activity
J9319_13105	COG0119	Catalyzes the condensation of the acetyl group of acetyl-CoA with 3-methyl-2-oxobutanoate (2-oxoisovalerate) to form 3-carboxy-3-hydroxy-4-methylpentanoate (2-isopropylmalate)
J9319_13110	COG0059	Involved in the biosynthesis of branched-chain amino acids (BCAA). Catalyzes an alkyl-migration followed by a ketol- acid reduction of (S)-2-acetolactate (S2AL) to yield (R)-2,3- dihydroxy-isovalerate. In the isomerase reaction, S2AL is rearranged via a Mg-dependent methyl migration to produce 3- hydroxy-3-methyl-2-ketobutyrate (HMKB). In the reductase reaction, this 2-ketoacid undergoes a metal-dependent reduction by NADPH to yield (R)-2,3-dihydroxy-isovalerate
J9319_13115	COG0440	acetolactate synthase activity
J9319_13120	COG0028	Belongs to the TPP enzyme family
J9319_13125	COG0115	Belongs to the class-IV pyridoxal-phosphate-dependent aminotransferase family
J9319_13130	COG2706	6-phosphogluconolactonase activity
J9319_13135	COG3339	Conserved Protein
J9319_13140	COG3966	Protein involved in D-alanine esterification of lipoteichoic acid and wall teichoic acid (D-alanine transfer protein)
J9319_13145	COG0236	Carrier of the growing fatty acid chain in fatty acid biosynthesis
J9319_13150	COG1696	Membrane protein involved in D-alanine export
J9319_13155	COG1020	D-alanine [D-alanyl carrier protein] ligase activity
J9319_13205	COG1876	peptidase activity
J9319_13270	COG5280	Phage tail tape measure protein TP901
J9319_13270	COG3953	SLT domain
J9319_13340	COG1783	phage Terminase large subunit
J9319_13345	COG5484	DNA packaging
J9319_13365	COG3677	Transposase
J9319_13430	COG1484	DNA-dependent DNA replication
J9319_13435	COG3935	DnaD domain protein
J9319_13440	COG3723	Recombinational DNA repair protein, rece pathway
J9319_13445	COG5377	YqaJ viral recombinase family
J9319_13480	COG1396	sequence-specific DNA binding
J9319_13490	COG2856	Zn peptidase
J9319_13505	COG0622	Phosphoesterase
J9319_13510	COG0127	Pyrophosphatase that catalyzes the hydrolysis of nucleoside triphosphates to their monophosphate derivatives, with a high preference for the non-canonical purine nucleotides XTP (xanthosine triphosphate), dITP (deoxyinosine triphosphate) and ITP. Seems to function as a house-cleaning enzyme that removes non-canonical purine nucleotides from the nucleotide pool, thus preventing their incorporation into DNA RNA and avoiding chromosomal lesions
J9319_13515	COG0689	Phosphorolytic exoribonuclease that removes nucleotide residues following the -CCA terminus of tRNA and adds nucleotides to the ends of RNA molecules by using nucleoside diphosphates as substrates
J9319_13520	COG5401	PFAM Sporulation and spore germination
J9319_13525	COG0796	Provides the (R)-glutamate required for cell wall biosynthesis
J9319_13530	COG1846	Transcriptional regulator
J9319_13535	COG2197	response regulator
J9319_13540	COG2851	Citrate transporter
J9319_13545	COG0583	DNA-binding transcription factor activity
J9319_13550	COG2828	Protein conserved in bacteria
J9319_13560	COG0824	Thioesterase
J9319_13565	COG0479	Belongs to the succinate dehydrogenase fumarate reductase iron-sulfur protein family
J9319_13570	COG1053	succinate dehydrogenase
J9319_13575	COG2009	succinate dehydrogenase
J9319_13580	COG1719	4-vinyl reductase, 4VR
J9319_13585	COG0527	aspartate kinase activity
J9319_13590	COG0322	excinuclease ABC activity
J9319_13595	COG3118	belongs to the thioredoxin family
J9319_13600	COG3534	alpha-L-arabinofuranosidase
J9319_13605	COG2025	fatty acid beta-oxidation using acyl-CoA dehydrogenase
J9319_13610	COG2086	electron transfer activity
J9319_13615	COG1024	Enoyl-CoA hydratase
J9319_13620	COG1309	transcriptional regulator
J9319_13625	COG0318	PFAM AMP-dependent synthetase and ligase
J9319_13635	COG3766	membrane
J9319_13645	COG1796	DNA polymerase
J9319_13645	COG1387	Histidinol phosphatase and related hydrolases of the PHP family
J9319_13650	COG1286	toxin biosynthetic process
J9319_13655	COG3027	Activator of cell division through the inhibition of FtsZ GTPase activity, therefore promoting FtsZ assembly into bundles of protofilaments necessary for the formation of the division Z ring. It is recruited early at mid-cell but it is not essential for cell division
J9319_13660	COG1039	Endonuclease that specifically degrades the RNA of RNA- DNA hybrids
J9319_13665	COG0072	phenylalanine-tRNA ligase activity
J9319_13665	COG0073	Is required not only for elongation of protein synthesis but also for the initiation of all mRNA translation through initiator tRNA(fMet) aminoacylation
J9319_13670	COG0016	Belongs to the class-II aminoacyl-tRNA synthetase family. Phe-tRNA synthetase alpha subunit type 1 subfamily
J9319_13675	COG0566	Belongs to the class IV-like SAM-binding methyltransferase superfamily. RNA methyltransferase TrmH family
J9319_13685	COG1966	Carbon starvation protein
J9319_13690	COG1363	Peptidase, m42
J9319_13700	COG3326	Membrane
J9319_13705	COG0292	Binds directly to 23S ribosomal RNA and is necessary for the in vitro assembly process of the 50S ribosomal subunit. It is not involved in the protein synthesizing functions of that subunit
J9319_13710	COG0291	Belongs to the bacterial ribosomal protein bL35 family
J9319_13715	COG0290	IF-3 binds to the 30S ribosomal subunit and shifts the equilibrum between 70S ribosomes and their 50S and 30S subunits in favor of the free subunits, thus enhancing the availability of 30S subunits on which protein synthesis initiation begins
J9319_13725	COG1011	Hydrolase
J9319_13735	COG0441	Catalyzes the attachment of threonine to tRNA(Thr) in a two-step reaction L-threonine is first activated by ATP to form Thr-AMP and then transferred to the acceptor end of tRNA(Thr)
J9319_13745	COG0398	Pfam SNARE associated Golgi protein
J9319_13750	COG1484	DNA-dependent DNA replication
J9319_13755	COG3611	Membrane attachment protein
J9319_13760	COG1327	Negatively regulates transcription of bacterial ribonucleotide reductase nrd genes and operons by binding to NrdR- boxes
J9319_13770	COG1586	Catalyzes the decarboxylation of S-adenosylmethionine to S-adenosylmethioninamine (dcAdoMet), the propylamine donor required for the synthesis of the polyamines spermine and spermidine from the diamine putrescine
J9319_13775	COG0057	glyceraldehyde-3-phosphate dehydrogenase (NAD+) (phosphorylating) activity
J9319_13780	COG0237	dephospho-CoA kinase activity
J9319_13785	COG1971	Probably functions as a manganese efflux pump
J9319_13790	COG0266	class I DNA-(apurinic or apyrimidinic site) endonuclease activity
J9319_13795	COG0258	In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity
J9319_13795	COG0749	In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity
J9319_13800	COG5002	protein histidine kinase activity
J9319_13805	COG0745	RESPONSE REGULATOR receiver
J9319_13810	COG0039	L-malate dehydrogenase activity
J9319_13815	COG0538	isocitrate dehydrogenase activity
J9319_13820	COG0372	Belongs to the citrate synthase family
J9319_13825	COG2707	UPF0756 membrane protein
J9319_13830	COG0628	permease
J9319_13835	COG3030	protein affecting phage T7 exclusion by the F plasmid
J9319_13845	COG0205	6-phosphofructokinase activity
J9319_13850	COG0825	malonyl-CoA metabolic process
J9319_13855	COG0777	Component of the acetyl coenzyme A carboxylase (ACC) complex. Biotin carboxylase (BC) catalyzes the carboxylation of biotin on its carrier protein (BCCP) and then the CO(2) group is transferred by the transcarboxylase to acetyl-CoA to form malonyl- CoA
J9319_13860	COG0281	malic enzyme
J9319_13865	COG0587	DNA-directed DNA polymerase activity
J9319_13885	COG0618	3'(2'),5'-bisphosphate nucleotidase activity
J9319_13895	COG4109	DRTGG domain
J9319_13900	COG2220	Zn-dependent hydrolases of the beta-lactamase fold
J9319_13905	COG1028	Short-chain dehydrogenase reductase Sdr
J9319_13915	COG0165	Argininosuccinate lyase
J9319_13920	COG0137	argininosuccinate synthase activity
J9319_13925	COG0521	Mo-molybdopterin cofactor biosynthetic process
J9319_13930	COG0282	Catalyzes the formation of acetyl phosphate from acetate and ATP. Can also catalyze the reverse reaction
J9319_13935	COG0827	DNA restriction-modification system
J9319_13940	COG2077	Thiol-specific peroxidase that catalyzes the reduction of hydrogen peroxide and organic hydroperoxides to water and alcohols, respectively. Plays a role in cell protection against oxidative stress by detoxifying peroxides
J9319_13945	COG3874	Sporulation protein YtfJ
J9319_13955	COG1714	RDD family
J9319_13960	COG0616	signal peptide processing
J9319_13965	COG0061	Involved in the regulation of the intracellular balance of NAD and NADP, and is a key enzyme in the biosynthesis of NADP. Catalyzes specifically the phosphorylation on 2'-hydroxyl of the adenosine moiety of NAD to yield NADP
J9319_13975	COG3239	Fatty acid desaturase
J9319_13980	COG4585	Histidine kinase
J9319_13985	COG2197	response regulator
J9319_13990	COG0614	abc-type fe3 -hydroxamate transport system, periplasmic component
J9319_13995	COG0745	RESPONSE REGULATOR receiver
J9319_14000	COG2205	protein histidine kinase activity
J9319_14005	COG1136	(ABC) transporter
J9319_14010	COG0577	efflux transmembrane transporter activity
J9319_14015	COG0402	S-adenosylhomocysteine deaminase activity
J9319_14020	COG2249	NAD(P)H dehydrogenase (quinone) activity
J9319_14035	COG1279	arginine transmembrane transporter activity
J9319_14055	COG0365	Catalyzes the conversion of acetate into acetyl-CoA (AcCoA), an essential intermediate at the junction of anabolic and catabolic pathways. AcsA undergoes a two-step reaction. In the first half reaction, AcsA combines acetate with ATP to form acetyl-adenylate (AcAMP) intermediate. In the second half reaction, it can then transfer the acetyl group from AcAMP to the sulfhydryl group of CoA, forming the product AcCoA
J9319_14065	COG0301	tRNA thio-modification
J9319_14070	COG1104	cysteine desulfurase activity
J9319_14075	COG1114	Component of the transport system for branched-chain amino acids
J9319_14080	COG1114	Component of the transport system for branched-chain amino acids
J9319_14085	COG4477	modulates the frequency and position of FtsZ ring formation. Inhibits FtsZ ring formation at polar sites. Interacts either with FtsZ or with one of its binding partners to promote depolymerization
J9319_14090	COG1387	Histidinol phosphatase and related hydrolases of the PHP family
J9319_14095	COG1309	transcriptional regulator
J9319_14100	COG1956	GAF domain-containing protein
J9319_14105	COG0522	One of the primary rRNA binding proteins, it binds directly to 16S rRNA where it nucleates assembly of the body of the 30S subunit
J9319_14115	COG1335	isochorismatase
J9319_14125	COG1075	acetyltransferases and hydrolases with the alpha beta hydrolase fold
J9319_14130	COG2329	Antibiotic biosynthesis monooxygenase
J9319_14135	COG0162	Catalyzes the attachment of tyrosine to tRNA(Tyr) in a two-step reaction tyrosine is first activated by ATP to form Tyr- AMP and then transferred to the acceptor end of tRNA(Tyr)
J9319_14140	COG0365	Catalyzes the conversion of acetate into acetyl-CoA (AcCoA), an essential intermediate at the junction of anabolic and catabolic pathways. AcsA undergoes a two-step reaction. In the first half reaction, AcsA combines acetate with ATP to form acetyl-adenylate (AcAMP) intermediate. In the second half reaction, it can then transfer the acetyl group from AcAMP to the sulfhydryl group of CoA, forming the product AcCoA
J9319_14145	COG0454	-acetyltransferase
J9319_14150	COG0517	IMP dehydrogenase activity
J9319_14155	COG0123	including yeast histone deacetylase and acetoin utilization protein
J9319_14160	COG1609	Transcriptional regulator
J9319_14165	COG2876	3-deoxy-7-phosphoheptulonate synthase activity
J9319_14165	COG1605	Chorismate mutase
J9319_14170	COG3118	belongs to the thioredoxin family
J9319_14175	COG4980	gas vesicle protein
J9319_14180	COG4768	protein containing a divergent version of the methyl-accepting chemotaxis-like domain
J9319_14185	COG0773	UDP-N-acetylmuramate-L-alanine ligase activity
J9319_14190	COG1674	ftsk spoiiie
J9319_14195	COG0073	Is required not only for elongation of protein synthesis but also for the initiation of all mRNA translation through initiator tRNA(fMet) aminoacylation
J9319_14200	COG4848	Belongs to the UPF0354 family
J9319_14205	COG0526	COG0526, thiol-disulfide isomerase and thioredoxins
J9319_14220	COG1363	Peptidase, m42
J9319_14225	COG5584	Small secreted protein
J9319_14230	COG0281	malic enzyme
J9319_14235	COG0491	Thiolesterase that catalyzes the hydrolysis of S-D- lactoyl-glutathione to form glutathione and D-lactic acid
J9319_14240	COG0220	tRNA (guanine-N7-)-methyltransferase activity
J9319_14250	COG0510	thiamine kinase activity
J9319_14255	COG1597	lipid kinase activity
J9319_14265	COG1514	Hydrolyzes RNA 2',3'-cyclic phosphodiester to an RNA 2'- phosphomonoester
J9319_14270	COG0031	Belongs to the cysteine synthase cystathionine beta- synthase family
J9319_14275	COG3340	Belongs to the peptidase S51 family
J9319_14280	COG0624	Catalyzes the hydrolysis of N-succinyl-L,L- diaminopimelic acid (SDAP), forming succinate and LL-2,6- diaminoheptanedioate (DAP), an intermediate involved in the bacterial biosynthesis of lysine and meso-diaminopimelic acid, an essential component of bacterial cell walls
J9319_14285	COG2252	PERMEase
J9319_14290	COG1349	DNA-binding transcription factor activity
J9319_14295	COG1187	pseudouridine synthase activity
J9319_14300	COG2244	polysaccharide biosynthetic process
J9319_14305	COG2081	HI0933 family
J9319_14315	COG1292	Belongs to the BCCT transporter (TC 2.A.15) family
J9319_14320	COG3196	Protein conserved in bacteria
J9319_14330	COG0607	Catalyzes the ATP-dependent transfer of a sulfur to tRNA to produce 4-thiouridine in position 8 of tRNAs, which functions as a near-UV photosensor. Also catalyzes the transfer of sulfur to the sulfur carrier protein ThiS, forming ThiS-thiocarboxylate. This is a step in the synthesis of thiazole, in the thiamine biosynthesis pathway. The sulfur is donated as persulfide by IscS
J9319_14335	COG5578	integral membrane protein
J9319_14340	COG0673	inositol 2-dehydrogenase activity
J9319_14345	COG1653	transport
J9319_14350	COG4225	unsaturated rhamnogalacturonyl hydrolase activity
J9319_14355	COG4209	transmembrane transport
J9319_14360	COG2207	Transcriptional regulator
J9319_14365	COG1733	regulation of RNA biosynthetic process
J9319_14370	COG2814	Major facilitator Superfamily
J9319_14375	COG0656	L-ascorbic acid biosynthetic process
J9319_14380	COG1653	transport
J9319_14385	COG0395	ABC-type sugar transport system, permease component
J9319_14390	COG0451	ADP-glyceromanno-heptose 6-epimerase activity
J9319_14395	COG1073	alpha beta
J9319_14400	COG0495	leucyl-tRNA aminoacylation
J9319_14410	COG1366	Belongs to the anti-sigma-factor antagonist family
J9319_14410	COG2202	Pas domain
J9319_14415	COG2433	Pfam Transposase IS66
J9319_14420	COG0577	efflux transmembrane transporter activity
J9319_14425	COG1136	(ABC) transporter
J9319_14435	COG1131	(ABC) transporter
J9319_14440	COG1725	Transcriptional regulator
J9319_14460	COG1242	4 iron, 4 sulfur cluster binding
J9319_14465	COG2519	Catalyzes the S-adenosyl-L-methionine-dependent formation of N(1)-methyladenine at position 58 (m1A58) in tRNA
J9319_14470	COG4326	sporulation control protein
J9319_14480	COG2267	carboxylic ester hydrolase activity
J9319_14485	COG0663	COG0663 Carbonic anhydrases acetyltransferases, isoleucine patch superfamily
J9319_14490	COG0367	asparagine synthase
J9319_14495	COG0192	Catalyzes the formation of S-adenosylmethionine (AdoMet) from methionine and ATP. The overall synthetic reaction is composed of two sequential steps, AdoMet formation and the subsequent tripolyphosphate hydrolysis which occurs prior to release of AdoMet from the enzyme
J9319_14500	COG1866	Involved in the gluconeogenesis. Catalyzes the conversion of oxaloacetate (OAA) to phosphoenolpyruvate (PEP) through direct phosphoryl transfer between the nucleoside triphosphate and OAA
J9319_14510	COG1506	peptidase
J9319_14515	COG1233	COG1233 Phytoene dehydrogenase and related
J9319_14535	COG0715	COG0715 ABC-type nitrate sulfonate bicarbonate transport systems periplasmic components
J9319_14540	COG1116	anion transmembrane transporter activity
J9319_14545	COG0600	ABC-type nitrate sulfonate bicarbonate transport system permease component
J9319_14550	COG0494	nUDIX hydrolase
J9319_14555	COG2310	stress, protein
J9319_14570	COG4824	toxin secretion phage lysis holin
J9319_14580	COG0783	Belongs to the Dps family
J9319_14595	COG1854	S-ribosylhomocysteine lyase activity
J9319_14600	COG0759	Could be involved in insertion of integral membrane proteins into the membrane
J9319_14605	COG0288	reversible hydration of carbon dioxide
J9319_14610	COG3443	Belongs to the bacterial solute-binding protein 9 family
J9319_14610	COG0803	Belongs to the bacterial solute-binding protein 9 family
J9319_14620	COG1271	oxidase subunit
J9319_14625	COG1294	oxidase, subunit
J9319_14640	COG4948	Mandelate Racemase Muconate Lactonizing
J9319_14645	COG0318	PFAM AMP-dependent synthetase and ligase
J9319_14650	COG0447	Converts o-succinylbenzoyl-CoA (OSB-CoA) to 1,4- dihydroxy-2-naphthoyl-CoA (DHNA-CoA)
J9319_14655	COG0596	Alpha beta hydrolase
J9319_14660	COG1165	Catalyzes the thiamine diphosphate-dependent decarboxylation of 2-oxoglutarate and the subsequent addition of the resulting succinic semialdehyde-thiamine pyrophosphate anion to isochorismate to yield 2-succinyl-5-enolpyruvyl-6-hydroxy-3- cyclohexene-1-carboxylate (SEPHCHC)
J9319_14665	COG1169	isochorismate synthase
J9319_14670	COG1575	Belongs to the MenA family. Type 1 subfamily
J9319_14675	COG1734	Transcription factor that acts by binding directly to the RNA polymerase (RNAP). Required for negative regulation of rRNA expression and positive regulation of several amino acid biosynthesis promoters
J9319_14805	COG3859	Proton-coupled thiamine transporter YuaJ
J9319_14810	COG1247	-acetyltransferase
J9319_14815	COG3339	Conserved Protein
J9319_14820	COG0772	Belongs to the SEDS family
J9319_14825	COG0772	Belongs to the SEDS family
J9319_14830	COG2268	Band 7 protein
J9319_14835	COG1585	Membrane protein implicated in regulation of membrane protease activity
J9319_14840	COG2318	DinB family
J9319_14845	COG1454	alcohol dehydrogenase
J9319_14850	COG1012	belongs to the aldehyde dehydrogenase family
J9319_14855	COG1510	regulation of RNA biosynthetic process
J9319_14870	COG3409	Peptidoglycan-binding domain 1 protein
J9319_14870	COG5632	N-Acetylmuramoyl-L-alanine amidase
J9319_14925	COG3778	Protein conserved in bacteria
J9319_14930	COG3299	homolog of phage Mu protein gp47
J9319_14935	COG3628	GPW Gp25 family protein
J9319_14945	COG4193	domain, Protein
J9319_14950	COG1652	LysM domain
J9319_14955	COG5280	Phage tail tape measure protein TP901
J9319_14955	COG3953	SLT domain
J9319_14955	COG5280	Phage tail tape measure protein TP901
J9319_14955	COG3953	SLT domain
J9319_15010	COG4653	Phage capsid family
J9319_15015	COG0338	D12 class N6 adenine-specific DNA methyltransferase
J9319_15020	COG5518	Phage portal protein
J9319_15025	COG1783	phage Terminase large subunit
J9319_15030	COG5484	DNA packaging
J9319_15035	COG1595	DNA-templated transcription, initiation
J9319_15045	COG4570	Endonuclease that resolves Holliday junction intermediates made during homologous genetic recombination and DNA repair. Exhibits sequence and structure-selective cleavage of four-way DNA junctions, where it introduces symmetrical nicks in two strands of the same polarity at the 5' side of dinucleotides. Corrects the defects in genetic recombination and DNA repair associated with inactivation of ruvAB or ruvC
J9319_15065	COG1396	sequence-specific DNA binding
J9319_15075	COG0502	Catalyzes the conversion of dethiobiotin (DTB) to biotin by the insertion of a sulfur atom into dethiobiotin via a radical- based mechanism
J9319_15090	COG0628	permease
J9319_15100	COG0673	inositol 2-dehydrogenase activity
J9319_15105	COG0693	protein deglycase activity
J9319_15110	COG0840	transmembrane signaling receptor activity
J9319_15115	COG0840	transmembrane signaling receptor activity
J9319_15120	COG0840	transmembrane signaling receptor activity
J9319_15125	COG0840	transmembrane signaling receptor activity
J9319_15140	COG2070	2-Nitropropane dioxygenase
J9319_15145	COG0432	Pfam Uncharacterised protein family UPF0047
J9319_15150	COG1253	flavin adenine dinucleotide binding
J9319_15155	COG2738	Putative neutral zinc metallopeptidase
J9319_15165	COG1226	(belongs to the monovalent cation proton antiporter 2 (CPA2) transporter (TC 2.A.37) family)
J9319_15180	COG0166	Belongs to the GPI family
J9319_15185	COG1979	alcohol dehydrogenase
J9319_15190	COG1979	alcohol dehydrogenase
J9319_15195	COG2155	Conserved Protein
J9319_15200	COG1098	S1 RNA binding domain
J9319_15205	COG0436	Aminotransferase
J9319_15210	COG1522	sequence-specific DNA binding
J9319_15215	COG2267	carboxylic ester hydrolase activity
J9319_15225	COG1168	Bifunctional PLP-dependent enzyme with beta-cystaTHIonase and maltose regulon repressor activities
J9319_15230	COG2205	protein histidine kinase activity
J9319_15245	COG5018	Exonuclease
J9319_15250	COG2814	Major facilitator Superfamily
J9319_15255	COG0744	Peptidoglycan polymerase that catalyzes glycan chain elongation from lipid-linked precursors
J9319_15260	COG3011	Protein conserved in bacteria
J9319_15270	COG3290	protein histidine kinase activity
J9319_15275	COG4565	transcriptional regulatory protein
J9319_15280	COG1744	ABC transporter substrate-binding protein PnrA-like
J9319_15285	COG3845	ABC transporter
J9319_15290	COG4603	Belongs to the binding-protein-dependent transport system permease family
J9319_15295	COG1079	Belongs to the binding-protein-dependent transport system permease family
J9319_15300	COG3493	citrate carrier protein
J9319_15310	COG1009	NADH ubiquinone oxidoreductase subunit 5 chain L Multisubunit Na H antiporter, MnhA subunit
J9319_15310	COG2111	Na H antiporter
J9319_15315	COG2111	Na H antiporter
J9319_15320	COG1006	Multisubunit Na H antiporter MnhC subunit
J9319_15325	COG0651	ATP synthesis coupled electron transport
J9319_15330	COG1863	multisubunit Na H antiporter MnhE subunit
J9319_15335	COG2212	antiporter activity
J9319_15340	COG1320	monovalent cation:proton antiporter activity
J9319_15345	COG2050	protein possibly involved in aromatic compounds catabolism
J9319_15350	COG2197	response regulator
J9319_15355	COG4585	Histidine kinase
J9319_15365	COG0142	geranyltranstransferase activity
J9319_15380	COG3434	signal transduction protein containing EAL and modified HD-GYP domains
J9319_15385	COG1488	Catalyzes the synthesis of beta-nicotinate D- ribonucleotide from nicotinate and 5-phospho-D-ribose 1-phosphate at the expense of ATP
J9319_15390	COG1335	isochorismatase
J9319_15395	COG5506	Protein of unknown function (DUF1694)
J9319_15415	COG0628	permease
J9319_15430	COG1418	mRNA catabolic process
J9319_15435	COG1028	Short-chain dehydrogenase reductase Sdr
J9319_15445	COG1511	domain protein
J9319_15450	COG0433	COG0433 Predicted ATPase
J9319_15450	COG1674	ftsk spoiiie
J9319_15455	COG4499	WXG100 protein secretion system (Wss), protein YukC
J9319_15460	COG5417	Belongs to the EsaB family
J9319_15465	COG4842	Belongs to the WXG100 family
J9319_15470	COG2508	Transcriptional regulator
J9319_15470	COG4465	DNA-binding protein that represses the expression of many genes that are induced as cells make the transition from rapid exponential growth to stationary phase. It is a GTP-binding protein that senses the intracellular GTP concentration as an indicator of nutritional limitations. At low GTP concentration it no longer binds GTP and stop to act as a transcriptional repressor
J9319_15475	COG0686	Belongs to the AlaDH PNT family
J9319_15480	COG1268	BioY protein
J9319_15485	COG2056	Na+-H+ antiporter family
J9319_15490	COG0260	Presumably involved in the processing and regular turnover of intracellular proteins. Catalyzes the removal of unsubstituted N-terminal amino acids from various peptides
J9319_15495	COG1963	PFAM Acid phosphatase vanadium-dependent haloperoxidase related
J9319_15500	COG3584	3D domain protein
J9319_15515	COG1252	NADH dehydrogenase
J9319_15520	COG0492	ferredoxin-NADP+ reductase activity
J9319_15535	COG0316	Belongs to the HesB IscA family
J9319_15540	COG0253	Catalyzes the stereoinversion of LL-2,6- diaminoheptanedioate (L,L-DAP) to meso-diaminoheptanedioate (meso- DAP), a precursor of L-lysine and an essential component of the bacterial peptidoglycan
J9319_15545	COG4844	belongs to the
J9319_15550	COG1252	NADH dehydrogenase
J9319_15560	COG4837	Protein of unknown function (DUF1462)
J9319_15565	COG0694	Involved in iron-sulfur cluster biogenesis. Binds a 4Fe- 4S cluster, can transfer this cluster to apoproteins, and thereby intervenes in the maturation of Fe S proteins. Could also act as a scaffold chaperone for damaged Fe S proteins
J9319_15570	COG1506	peptidase
J9319_15570	COG4946	Tricorn protease homolog
J9319_15570	COG0823	Involved in the tonB-independent uptake of proteins
J9319_15575	COG0083	homoserine kinase activity
J9319_15580	COG0498	Catalyzes the gamma-elimination of phosphate from L- phosphohomoserine and the beta-addition of water to produce L- threonine
J9319_15585	COG0460	homoserine dehydrogenase
J9319_15590	COG1052	Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family
J9319_15595	COG2334	A protein kinase that phosphorylates Ser and Thr residues. Probably acts to suppress the effects of stress linked to accumulation of reactive oxygen species. Probably involved in the extracytoplasmic stress response
J9319_15600	COG1267	Lipid phosphatase which dephosphorylates phosphatidylglycerophosphate (PGP) to phosphatidylglycerol (PG)
J9319_15605	COG0647	UMP catabolic process
J9319_15610	COG2445	Protein of unknown function DUF86
J9319_15615	COG4470	Protein conserved in bacteria
J9319_15625	COG0320	Catalyzes the radical-mediated insertion of two sulfur atoms into the C-6 and C-8 positions of the octanoyl moiety bound to the lipoyl domains of lipoate-dependent enzymes, thereby converting the octanoylated domains into lipoylated derivatives
J9319_15630	COG0739	heme binding
J9319_15650	COG3377	Domain of unknown function (DUF1805)
J9319_15655	COG0737	Belongs to the 5'-nucleotidase family
J9319_15660	COG1801	Protein of unknown function DUF72
J9319_15665	COG2508	Transcriptional regulator
J9319_15670	COG2140	Oxalate decarboxylase
J9319_15675	COG2814	Major facilitator Superfamily
J9319_15680	COG0075	2-aminoethylphosphonate-pyruvate transaminase activity
J9319_15685	COG2356	endonuclease I
J9319_15700	COG0609	Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily
J9319_15705	COG0609	Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily
J9319_15710	COG0614	abc-type fe3 -hydroxamate transport system, periplasmic component
J9319_15730	COG5002	protein histidine kinase activity
J9319_15730	COG0642	Histidine kinase
J9319_15735	COG0745	RESPONSE REGULATOR receiver
J9319_15740	COG2311	Membrane
J9319_15755	COG1182	Catalyzes the reductive cleavage of azo bond in aromatic azo compounds to the corresponding amines. Requires NADH, but not NADPH, as an electron donor for its activity
J9319_15760	COG1090	epimerase
J9319_15765	COG1309	transcriptional regulator
J9319_15775	COG0719	Fe-S assembly protein
J9319_15780	COG0822	iron-sulfur transferase activity
J9319_15785	COG0520	Catalyzes the removal of elemental sulfur and selenium atoms from L-cysteine, L-cystine, L-selenocysteine, and L- selenocystine to produce L-alanine
J9319_15790	COG0719	Fe-S assembly protein
J9319_15795	COG0396	ATPase activity
J9319_15805	COG0599	Antioxidant protein with alkyl hydroperoxidase activity. Required for the reduction of the AhpC active site cysteine residues and for the regeneration of the AhpC enzyme activity
J9319_15810	COG1464	Belongs to the NlpA lipoprotein family
J9319_15815	COG2011	ABC-type metal ion transport system permease component
J9319_15820	COG1135	Part of the ABC transporter complex MetNIQ involved in methionine import. Responsible for energy coupling to the transport system
J9319_15830	COG0526	COG0526, thiol-disulfide isomerase and thioredoxins
J9319_15835	COG1658	Required for correct processing of both the 5' and 3' ends of 5S rRNA precursor. Cleaves both sides of a double-stranded region yielding mature 5S rRNA in one step
J9319_15845	COG0509	glycine decarboxylation via glycine cleavage system
J9319_15850	COG1393	Belongs to the ArsC family
J9319_15855	COG1960	acyl-CoA dehydrogenase activity
J9319_15860	COG0183	Belongs to the thiolase family
J9319_15865	COG1024	Enoyl-CoA hydratase
J9319_15865	COG1250	3-hydroxyacyl-CoA dehydrogenase
J9319_15880	COG5577	PFAM Coat F domain
J9319_15890	COG1120	ATPase activity
J9319_15900	COG1028	Short-chain dehydrogenase reductase Sdr
J9319_15905	COG0265	Trypsin-like serine proteases, typically periplasmic, contain C-terminal PDZ domain
J9319_15910	COG0745	RESPONSE REGULATOR receiver
J9319_15915	COG2205	protein histidine kinase activity
J9319_15915	COG2770	Histidine kinase
J9319_15925	COG1309	transcriptional regulator
J9319_15930	COG0114	fumarate hydratase activity
J9319_15940	COG0697	spore germination
J9319_15945	COG0814	amino acid
J9319_15960	COG2197	response regulator
J9319_15965	COG4585	Histidine kinase
J9319_15970	COG4758	membrane
J9319_15980	COG1842	Phage shock protein A
J9319_15985	COG4758	membrane
J9319_15990	COG2096	Adenosyltransferase
J9319_15995	COG1028	Short-chain dehydrogenase reductase Sdr
J9319_16000	COG1995	Catalyzes the NAD(P)-dependent oxidation of 4- (phosphohydroxy)-L-threonine (HTP) into 2-amino-3-oxo-4- (phosphohydroxy)butyric acid which spontaneously decarboxylates to form 3-amino-2-oxopropyl phosphate (AHAP)
J9319_16010	COG3604	Transcriptional regulator
J9319_16025	COG1454	alcohol dehydrogenase
J9319_16030	COG0329	Catalyzes the condensation of (S)-aspartate-beta- semialdehyde (S)-ASA and pyruvate to 4-hydroxy- tetrahydrodipicolinate (HTPA)
J9319_16035	COG1120	ATPase activity
J9319_16040	COG0609	Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily
J9319_16045	COG0614	abc-type fe3 -hydroxamate transport system, periplasmic component
J9319_16055	COG2721	sulfolactate sulfo-lyase activity
J9319_16060	COG0246	Mannitol dehydrogenase
J9319_16065	COG1609	Transcriptional regulator
J9319_16070	COG1904	glucuronate isomerase
J9319_16075	COG2205	protein histidine kinase activity
J9319_16080	COG0745	RESPONSE REGULATOR receiver
J9319_16085	COG1120	ATPase activity
J9319_16090	COG0609	Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily
J9319_16095	COG0609	Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily
J9319_16100	COG0614	abc-type fe3 -hydroxamate transport system, periplasmic component
J9319_16105	COG0531	amino acid
J9319_16120	COG1988	membrane-bound metal-dependent
J9319_16125	COG1368	sulfuric ester hydrolase activity
J9319_16130	COG0725	ABC transporter, periplasmic molybdate-binding protein
J9319_16135	COG4149	molybdate abc transporter
J9319_16140	COG0656	L-ascorbic acid biosynthetic process
J9319_16145	COG1940	carbohydrate kinase activity
J9319_16150	COG0025	NhaP-type Na H and K H
J9319_16155	COG2860	membrane
J9319_16160	COG1495	Required for disulfide bond formation in some periplasmic proteins. Acts by oxidizing the DsbA protein
J9319_16165	COG1651	Required for disulfide bond formation in some periplasmic proteins. Acts by transferring its disulfide bond to other proteins and is reduced in the process
J9319_16170	COG2217	Heavy metal translocating P-type atpase
J9319_16175	COG1121	(ABC) transporter
J9319_16180	COG1108	ABC-type Mn2 Zn2 transport systems permease components
J9319_16185	COG0803	Belongs to the bacterial solute-binding protein 9 family
J9319_16195	COG3226	Transcriptional regulator
J9319_16200	COG0784	Response regulator, receiver
J9319_16205	COG4191	Histidine kinase
J9319_16210	COG1027	Aspartate ammonia-lyase
J9319_16225	COG2217	Heavy metal translocating P-type atpase
J9319_16230	COG2608	mercury ion transmembrane transporter activity
J9319_16235	COG1937	Protein conserved in bacteria
J9319_16275	COG0691	Required for rescue of stalled ribosomes mediated by trans-translation. Binds to transfer-messenger RNA (tmRNA), required for stable association of tmRNA with ribosomes. tmRNA and SmpB together mimic tRNA shape, replacing the anticodon stem-loop with SmpB. tmRNA is encoded by the ssrA gene
J9319_16280	COG0557	exoribonuclease II activity
J9319_16285	COG1647	Serine aminopeptidase, S33
J9319_16290	COG1314	P-P-bond-hydrolysis-driven protein transmembrane transporter activity
J9319_16295	COG2002	toxin-antitoxin pair type II binding
J9319_16300	COG1476	TRANSCRIPTIONal
J9319_16305	COG1396	sequence-specific DNA binding
J9319_16310	COG1396	sequence-specific DNA binding
J9319_16315	COG1733	regulation of RNA biosynthetic process
J9319_16320	COG1174	glycine betaine transport
J9319_16325	COG1732	Glycine betaine
J9319_16330	COG1174	glycine betaine transport
J9319_16335	COG1125	glycine betaine transport
J9319_16335	COG0517	IMP dehydrogenase activity
J9319_16340	COG1510	regulation of RNA biosynthetic process
J9319_16345	COG2095	MarC family integral membrane protein
J9319_16355	COG0456	acetyltransferase
J9319_16375	COG1131	(ABC) transporter
J9319_16385	COG0148	phosphopyruvate hydratase activity
J9319_16390	COG0696	Catalyzes the interconversion of 2-phosphoglycerate and 3-phosphoglycerate
J9319_16395	COG0149	triose-phosphate isomerase activity
J9319_16400	COG0126	phosphoglycerate kinase activity
J9319_16405	COG0057	glyceraldehyde-3-phosphate dehydrogenase (NAD+) (phosphorylating) activity
J9319_16410	COG2390	Transcriptional regulator
J9319_16415	COG0833	amino acid
J9319_16420	COG4992	N2-acetyl-L-ornithine:2-oxoglutarate 5-aminotransferase activity
J9319_16425	COG3829	transcription factor binding
J9319_16430	COG2186	Transcriptional regulator
J9319_16435	COG1508	bacterial-type RNA polymerase transcriptional activator activity, sequence-specific DNA binding
J9319_16445	COG0534	Mate efflux family protein
J9319_16450	COG4608	Belongs to the ABC transporter superfamily
J9319_16455	COG0444	Belongs to the ABC transporter superfamily
J9319_16460	COG1173	ABC-type dipeptide oligopeptide nickel transport systems, permease components
J9319_16465	COG0601	transmembrane transport
J9319_16470	COG0747	negative chemotaxis
J9319_16475	COG0399	UDP-4-amino-4-deoxy-L-arabinose aminotransferase
J9319_16480	COG0110	maltose O-acetyltransferase activity
J9319_16485	COG2148	undecaprenyl-phosphate glucose phosphotransferase activity
J9319_16490	COG2244	polysaccharide biosynthetic process
J9319_16495	COG5039	Polysaccharide pyruvyl transferase
J9319_16500	COG1216	Glycosyl transferase, family 2
J9319_16510	COG0438	transferase activity, transferring glycosyl groups
J9319_16515	COG1215	transferase activity, transferring glycosyl groups
J9319_16520	COG0438	transferase activity, transferring glycosyl groups
J9319_16525	COG1086	Polysaccharide biosynthesis protein
J9319_16530	COG0489	protein tyrosine kinase activity
J9319_16535	COG3944	biosynthesis protein
J9319_16540	COG1396	sequence-specific DNA binding
J9319_16550	COG0614	abc-type fe3 -hydroxamate transport system, periplasmic component
J9319_16555	COG0609	Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily
J9319_16560	COG0609	Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily
J9319_16565	COG0726	polysaccharide deacetylase
J9319_16570	COG0488	(ABC) transporter
J9319_16590	COG0601	transmembrane transport
J9319_16595	COG0747	negative chemotaxis
J9319_16600	COG1819	glycosyl
J9319_16605	COG0614	abc-type fe3 -hydroxamate transport system, periplasmic component
J9319_16620	COG0740	serine-type endopeptidase activity
J9319_16625	COG1611	Belongs to the LOG family
J9319_16630	COG1694	Mazg nucleotide pyrophosphohydrolase
J9319_16635	COG0659	secondary active sulfate transmembrane transporter activity
J9319_16640	COG0288	reversible hydration of carbon dioxide
J9319_16645	COG1052	Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family
J9319_16655	COG2162	N-hydroxyarylamine O-acetyltransferase activity
J9319_16660	COG1925	phosphoenolpyruvate-dependent sugar phosphotransferase system
J9319_16665	COG1481	regulation of sporulation
J9319_16670	COG0391	Required for morphogenesis under gluconeogenic growth conditions
J9319_16675	COG1660	Displays ATPase and GTPase activities
J9319_16680	COG1051	belongs to the nudix hydrolase family
J9319_16685	COG0492	ferredoxin-NADP+ reductase activity
J9319_16690	COG0791	NLP P60 protein
J9319_16690	COG3883	PFAM NLP P60 protein
J9319_16695	COG0457	Tetratricopeptide repeat
J9319_16700	COG0140	phosphoribosyl-ATP diphosphatase activity
J9319_16700	COG0139	Catalyzes the hydrolysis of the adenine ring of phosphoribosyl-AMP
J9319_16705	COG0107	imidazoleglycerol-phosphate synthase activity
J9319_16710	COG0106	1-(5-phosphoribosyl)-5- 5-phosphoribosylamino)methylideneamino imidazole-4-carboxamide isomerase
J9319_16715	COG0118	IGPS catalyzes the conversion of PRFAR and glutamine to IGP, AICAR and glutamate. The HisH subunit provides the glutamine amidotransferase activity that produces the ammonia necessary to HisF for the synthesis of IGP and AICAR
J9319_16720	COG0131	Imidazoleglycerol-phosphate dehydratase
J9319_16725	COG0141	Catalyzes the sequential NAD-dependent oxidations of L- histidinol to L-histidinaldehyde and then to L-histidine
J9319_16730	COG0040	Catalyzes the condensation of ATP and 5-phosphoribose 1- diphosphate to form N'-(5'-phosphoribosyl)-ATP (PR-ATP). Has a crucial role in the pathway because the rate of histidine biosynthesis seems to be controlled primarily by regulation of hisG enzymatic activity
J9319_16735	COG3705	Required for the first step of histidine biosynthesis. May allow the feedback regulation of ATP phosphoribosyltransferase activity by histidine
J9319_16740	COG4990	cell redox homeostasis
J9319_16745	COG2910	NAD(P)H-binding
J9319_16750	COG1959	2 iron, 2 sulfur cluster binding
J9319_16755	COG0110	maltose O-acetyltransferase activity
J9319_16760	COG0546	phosphoglycolate phosphatase activity
J9319_16765	COG0370	Transporter of a GTP-driven Fe(2 ) uptake system
J9319_16775	COG1493	Catalyzes the ATP- as well as the pyrophosphate- dependent phosphorylation of a specific serine residue in HPr, a phosphocarrier protein of the phosphoenolpyruvate-dependent sugar phosphotransferase system (PTS). HprK P also catalyzes the pyrophosphate-producing, inorganic phosphate-dependent dephosphorylation (phosphorolysis) of seryl-phosphorylated HPr (P- Ser-HPr). The two antagonistic activities of HprK P are regulated by several intracellular metabolites, which change their concentration in response to the absence or presence of rapidly metabolisable carbon sources (glucose, fructose, etc.) in the growth medium. Therefore, by controlling the phosphorylation state of HPr, HPrK P is a sensor enzyme that plays a major role in the regulation of carbon metabolism and sugar transport it mediates carbon catabolite repression (CCR), and regulates PTS-catalyzed carbohydrate uptake and inducer exclusion
J9319_16780	COG1820	Belongs to the metallo-dependent hydrolases superfamily. NagA family
J9319_16785	COG0363	glucosamine-6-phosphate deaminase activity
J9319_16790	COG2188	Transcriptional regulator
J9319_16795	COG1409	Hydrolyzes cAMP to 5'-AMP. Plays an important regulatory role in modulating the intracellular concentration of cAMP, thereby influencing cAMP-dependent processes
J9319_16800	COG1950	PFAM Membrane protein of
J9319_16805	COG1983	PspC domain protein
J9319_16810	COG3595	metallopeptidase activity
J9319_16825	COG0178	The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrA is an ATPase and a DNA-binding protein. A damage recognition complex composed of 2 uvrA and 2 uvrB subunits scans DNA for abnormalities. When the presence of a lesion has been verified by uvrB, the uvrA molecules dissociate
J9319_16835	COG4897	Protein conserved in bacteria
J9319_16840	COG3848	Pyruvate phosphate dikinase
J9319_16840	COG0574	Belongs to the PEP-utilizing enzyme family
J9319_16845	COG1309	transcriptional regulator
J9319_16850	COG2814	Major facilitator Superfamily
J9319_16860	COG0745	RESPONSE REGULATOR receiver
J9319_16865	COG5002	protein histidine kinase activity
J9319_16870	COG1807	4-amino-4-deoxy-L-arabinose transferase and related glycosyltransferases of PMT family
J9319_16875	COG0463	Glycosyl transferase, family 2
J9319_16880	COG1113	amino acid transport
J9319_16885	COG0778	Nitroreductase
J9319_16890	COG1733	regulation of RNA biosynthetic process
J9319_16895	COG0265	Trypsin-like serine proteases, typically periplasmic, contain C-terminal PDZ domain
J9319_16905	COG3409	Peptidoglycan-binding domain 1 protein
J9319_16905	COG0793	Belongs to the peptidase S41A family
J9319_16910	COG0730	response to heat
J9319_16915	COG3883	PFAM NLP P60 protein
J9319_16915	COG0791	NLP P60 protein
J9319_16920	COG2177	Part of the ABC transporter FtsEX involved in
J9319_16925	COG2884	Cell division ATP-binding protein ftsE
J9319_16930	COG2010	Cytochrome c
J9319_16935	COG1284	Uncharacterised 5xTM membrane BCR, YitT family COG1284
J9319_16955	COG0653	protein targeting
J9319_16960	COG1544	Required for dimerization of active 70S ribosomes into 100S ribosomes in stationary phase
J9319_16965	COG0840	transmembrane signaling receptor activity
J9319_16980	COG1516	flagellar protein fliS
J9319_16985	COG1345	Required for morphogenesis and for the elongation of the flagellar filament by facilitating polymerization of the flagellin monomers at the tip of growing filament. Forms a capping structure, which prevents flagellin subunits (transported through the central channel of the flagellum) from leaking out without polymerization at the distal end
J9319_16990	COG1334	flagellar protein FlaG
J9319_16995	COG1551	Could accelerate the degradation of some genes transcripts potentially through selective RNA binding
J9319_17000	COG1699	Binds to the C-terminal region of flagellin, which is implicated in polymerization, and participates in the assembly of the flagellum
J9319_17010	COG1344	Flagellin is the subunit protein which polymerizes to form the filaments of bacterial flagella
J9319_17015	COG4786	Flagellar basal body rod
J9319_17015	COG1256	bacterial-type flagellum assembly
J9319_17020	COG3418	PFAM FlgN family protein
J9319_17035	COG1040	competence protein
J9319_17045	COG4098	Superfamily II DNA RNA helicase required for DNA uptake (late competence protein)
J9319_17050	COG1307	EDD domain protein, DegV family
J9319_17055	COG2197	response regulator
J9319_17060	COG4585	Histidine kinase
J9319_17065	COG1739	Uncharacterized protein family UPF0029
J9319_17070	COG1316	TRANSCRIPTIONal
J9319_17075	COG0472	First step of the lipid cycle reactions in the biosynthesis of the cell wall peptidoglycan
J9319_17080	COG0438	transferase activity, transferring glycosyl groups
J9319_17085	COG1215	transferase activity, transferring glycosyl groups
J9319_17090	COG3206	protein involved in exopolysaccharide biosynthesis
J9319_17095	COG3307	-O-antigen
J9319_17100	COG0451	ADP-glyceromanno-heptose 6-epimerase activity
J9319_17105	COG1004	Belongs to the UDP-glucose GDP-mannose dehydrogenase family
J9319_17110	COG0297	glycogen (starch) synthase activity
J9319_17110	COG0438	transferase activity, transferring glycosyl groups
J9319_17115	COG2244	polysaccharide biosynthetic process
J9319_17130	COG0860	N-Acetylmuramoyl-L-alanine amidase
J9319_17130	COG2247	cell wall binding repeat
J9319_17135	COG0860	N-Acetylmuramoyl-L-alanine amidase
J9319_17135	COG2247	cell wall binding repeat
J9319_17140	COG2247	cell wall binding repeat
J9319_17140	COG2385	sporulation resulting in formation of a cellular spore
J9319_17150	COG1316	TRANSCRIPTIONal
J9319_17155	COG0381	UDP-N-acetylglucosamine 2-epimerase activity
J9319_17160	COG1210	Utp--glucose-1-phosphate uridylyltransferase
J9319_17165	COG1134	teichoic acid transport
J9319_17170	COG1682	transport, permease protein
J9319_17175	COG1216	Glycosyl transferase, family 2
J9319_17185	COG1181	Belongs to the D-alanine--D-alanine ligase family
J9319_17190	COG1887	Glycosyl glycerophosphate transferases involved in teichoic acid biosynthesis TagF TagB EpsJ RodC
J9319_17200	COG1209	Catalyzes the formation of dTDP-glucose, from dTTP and glucose 1-phosphate, as well as its pyrophosphorolysis
J9319_17205	COG1887	Glycosyl glycerophosphate transferases involved in teichoic acid biosynthesis TagF TagB EpsJ RodC
J9319_17215	COG0615	ADP-L-glycero-beta-D-manno-heptose biosynthetic process
J9319_17220	COG1922	lipopolysaccharide N-acetylmannosaminouronosyltransferase activity
J9319_17225	COG1887	Glycosyl glycerophosphate transferases involved in teichoic acid biosynthesis TagF TagB EpsJ RodC
J9319_17230	COG4193	domain, Protein
J9319_17235	COG1887	Glycosyl glycerophosphate transferases involved in teichoic acid biosynthesis TagF TagB EpsJ RodC
J9319_17240	COG1482	cell wall glycoprotein biosynthetic process
J9319_17250	COG1175	transmembrane transport
J9319_17255	COG1653	transport
J9319_17260	COG2197	response regulator
J9319_17265	COG2972	Histidine kinase
J9319_17275	COG0454	-acetyltransferase
J9319_17280	COG0800	Aldolase
J9319_17285	COG0524	Catalyzes the phosphorylation of ribose at O-5 in a reaction requiring ATP and magnesium. The resulting D-ribose-5- phosphate can then be used either for sythesis of nucleotides, histidine, and tryptophan, or as a component of the pentose phosphate pathway
J9319_17290	COG1609	Transcriptional regulator
J9319_17295	COG3717	Catalyzes the isomerization of 5-dehydro-4-deoxy-D- glucuronate to 3-deoxy-D-glycero-2,5-hexodiulosonate
J9319_17300	COG1028	Short-chain dehydrogenase reductase Sdr
J9319_17305	COG0697	spore germination
J9319_17310	COG0814	amino acid
J9319_17325	COG2814	Major facilitator Superfamily
J9319_17330	COG1316	TRANSCRIPTIONal
J9319_17335	COG0561	phosphatase activity
J9319_17340	COG0791	NLP P60 protein
J9319_17350	COG2843	Capsule synthesis protein
J9319_17360	COG0771	Cell wall formation. Catalyzes the addition of glutamate to the nucleotide precursor UDP-N-acetylmuramoyl-L-alanine (UMA)
J9319_17365	COG0697	spore germination
J9319_17380	COG1609	Transcriptional regulator
J9319_17385	COG0524	Catalyzes the phosphorylation of ribose at O-5 in a reaction requiring ATP and magnesium. The resulting D-ribose-5- phosphate can then be used either for sythesis of nucleotides, histidine, and tryptophan, or as a component of the pentose phosphate pathway
J9319_17390	COG1869	D-ribose catabolic process
J9319_17395	COG1129	ABC transporter
J9319_17400	COG1172	Belongs to the binding-protein-dependent transport system permease family
J9319_17405	COG1879	ABC-type sugar transport system periplasmic component
J9319_17410	COG1853	conserved protein domain typically associated with flavoprotein oxygenases, DIM6 NTAB family
J9319_17415	COG0583	DNA-binding transcription factor activity
J9319_17420	COG0028	Belongs to the TPP enzyme family
J9319_17425	COG3527	Alpha-acetolactate decarboxylase
J9319_17430	COG1522	sequence-specific DNA binding
J9319_17435	COG2059	Chromate
J9319_17440	COG2059	Chromate
J9319_17445	COG1004	Belongs to the UDP-glucose GDP-mannose dehydrogenase family
J9319_17455	COG4715	Zinc finger, swim domain protein
J9319_17460	COG0553	Transcription regulator that activates transcription by stimulating RNA polymerase (RNAP) recycling in case of stress conditions such as supercoiled DNA or high salt concentrations. Probably acts by releasing the RNAP, when it is trapped or immobilized on tightly supercoiled DNA. Does not activate transcription on linear DNA. Probably not involved in DNA repair
J9319_17465	COG1366	Belongs to the anti-sigma-factor antagonist family
J9319_17465	COG2202	Pas domain
J9319_17470	COG0561	phosphatase activity
J9319_17485	COG1970	mechanosensitive ion channel activity
J9319_17490	COG0764	3-hydroxyoctanoyl-[acyl-carrier-protein] dehydratase activity
J9319_17495	COG0457	Tetratricopeptide repeat
J9319_17500	COG4786	Flagellar basal body rod
J9319_17505	COG4786	Flagellar basal body rod
J9319_17510	COG1077	Cell shape determining protein MreB Mrl
J9319_17515	COG1609	Transcriptional regulator
J9319_17520	COG1846	Transcriptional regulator
J9319_17525	COG2814	Major facilitator Superfamily
J9319_17530	COG0671	phosphoesterase, PA-phosphatase related
J9319_17535	COG0477	Major facilitator Superfamily
J9319_17540	COG0834	ABC-type amino acid transport signal transduction systems periplasmic component domain
J9319_17545	COG0765	amino acid transport
J9319_17550	COG1126	abc transporter atp-binding protein
J9319_17555	COG0004	ammonium transporteR
J9319_17560	COG0347	Belongs to the P(II) protein family
J9319_17565	COG0739	heme binding
J9319_17570	COG1247	-acetyltransferase
J9319_17610	COG0267	Belongs to the bacterial ribosomal protein bL33 family
J9319_17615	COG0523	cobalamin synthesis protein
J9319_17620	COG0199	Binds 16S rRNA, required for the assembly of 30S particles and may also be responsible for determining the conformation of the 16S rRNA at the A site
J9319_17625	COG2896	Catalyzes the cyclization of GTP to (8S)-3',8-cyclo-7,8- dihydroguanosine 5'-triphosphate
J9319_17630	COG1526	Required for formate dehydrogenase (FDH) activity. Acts as a sulfur carrier protein that transfers sulfur from IscS to the molybdenum cofactor prior to its insertion into FDH
J9319_17635	COG2223	nitrite transmembrane transporter activity
J9319_17645	COG2304	oxidoreductase activity
J9319_17650	COG2304	oxidoreductase activity
J9319_17655	COG2385	sporulation resulting in formation of a cellular spore
J9319_17660	COG0766	Cell wall formation. Adds enolpyruvyl to UDP-N- acetylglucosamine
J9319_17670	COG4836	Membrane
J9319_17680	COG0355	proton-transporting ATP synthase activity, rotational mechanism
J9319_17685	COG0055	Produces ATP from ADP in the presence of a proton gradient across the membrane. The catalytic sites are hosted primarily by the beta subunits
J9319_17690	COG0224	Produces ATP from ADP in the presence of a proton gradient across the membrane. The gamma chain is believed to be important in regulating ATPase activity and the flow of protons through the CF(0) complex
J9319_17695	COG0056	Produces ATP from ADP in the presence of a proton gradient across the membrane. The alpha chain is a regulatory subunit
J9319_17700	COG0712	F(1)F(0) ATP synthase produces ATP from ADP in the presence of a proton or sodium gradient. F-type ATPases consist of two structural domains, F(1) containing the extramembraneous catalytic core and F(0) containing the membrane proton channel, linked together by a central stalk and a peripheral stalk. During catalysis, ATP synthesis in the catalytic domain of F(1) is coupled via a rotary mechanism of the central stalk subunits to proton translocation
J9319_17705	COG0711	Component of the F(0) channel, it forms part of the peripheral stalk, linking F(1) to F(0)
J9319_17710	COG0636	F(1)F(0) ATP synthase produces ATP from ADP in the presence of a proton or sodium gradient. F-type ATPases consist of two structural domains, F(1) containing the extramembraneous catalytic core and F(0) containing the membrane proton channel, linked together by a central stalk and a peripheral stalk. During catalysis, ATP synthesis in the catalytic domain of F(1) is coupled via a rotary mechanism of the central stalk subunits to proton translocation
J9319_17715	COG0356	it plays a direct role in the translocation of protons across the membrane
J9319_17725	COG0035	Catalyzes the conversion of uracil and 5-phospho-alpha- D-ribose 1-diphosphate (PRPP) to UMP and diphosphate
J9319_17730	COG0112	Catalyzes the reversible interconversion of serine and glycine with tetrahydrofolate (THF) serving as the one-carbon carrier. This reaction serves as the major source of one-carbon groups required for the biosynthesis of purines, thymidylate, methionine, and other important biomolecules. Also exhibits THF- independent aldolase activity toward beta-hydroxyamino acids, producing glycine and aldehydes, via a retro-aldol mechanism
J9319_17735	COG4475	Protein of unknown function (DUF436)
J9319_17740	COG0698	ribose 5-phosphate isomerase
J9319_17745	COG0394	Belongs to the low molecular weight phosphotyrosine protein phosphatase family
J9319_17750	COG1971	Probably functions as a manganese efflux pump
J9319_17755	COG0009	L-threonylcarbamoyladenylate synthase
J9319_17760	COG1246	Belongs to the acetyltransferase family. ArgA subfamily
J9319_17775	COG2890	protein-(glutamine-N5) methyltransferase activity
J9319_17780	COG0216	Peptide chain release factor 1 directs the termination of translation in response to the peptide chain termination codons UAG and UAA
J9319_17785	COG0789	Transcriptional regulator
J9319_17790	COG0679	Auxin Efflux Carrier
J9319_17795	COG0281	malic enzyme
J9319_17800	COG1435	thymidine kinase activity
J9319_17805	COG0254	rRNA binding
J9319_17810	COG1158	Facilitates transcription termination by a mechanism that involves Rho binding to the nascent RNA, activation of Rho's RNA-dependent ATPase activity, and release of the mRNA from the DNA template
J9319_17815	COG1494	fructose-1,6-bisphosphatase
J9319_17820	COG0766	Cell wall formation. Adds enolpyruvyl to UDP-N- acetylglucosamine
J9319_17825	COG0176	Transaldolase is important for the balance of metabolites in the pentose-phosphate pathway
J9319_17830	COG0191	fructose-bisphosphate aldolase activity
J9319_17835	COG2204	response regulator
J9319_17840	COG4821	SIS domain
J9319_17845	COG0504	CTP synthase activity
J9319_17850	COG3343	RNA polymerase activity
J9319_17865	COG1960	acyl-CoA dehydrogenase activity
J9319_17870	COG1960	acyl-CoA dehydrogenase activity
J9319_17875	COG1250	3-hydroxyacyl-CoA dehydrogenase
J9319_17880	COG0183	Belongs to the thiolase family
J9319_17885	COG0247	lactate metabolic process
J9319_17885	COG2181	nitrate reductase activity
J9319_17890	COG1502	Catalyzes the reversible phosphatidyl group transfer from one phosphatidylglycerol molecule to another to form cardiolipin (CL) (diphosphatidylglycerol) and glycerol
J9319_17895	COG4294	response to UV
J9319_17905	COG1619	proteins homologs of microcin C7 resistance protein MccF
J9319_17910	COG1132	(ABC) transporter
J9319_17915	COG1502	Catalyzes the reversible phosphatidyl group transfer from one phosphatidylglycerol molecule to another to form cardiolipin (CL) (diphosphatidylglycerol) and glycerol
J9319_17920	COG1619	proteins homologs of microcin C7 resistance protein MccF
J9319_17925	COG0018	arginyl-trna synthetase
J9319_17930	COG4506	Protein conserved in bacteria
J9319_17940	COG0010	Belongs to the arginase family
J9319_17945	COG0421	Catalyzes the irreversible transfer of a propylamine group from the amino donor S-adenosylmethioninamine (decarboxy- AdoMet) to putrescine (1,4-diaminobutane) to yield spermidine
J9319_17950	COG0744	Peptidoglycan polymerase that catalyzes glycan chain elongation from lipid-linked precursors
J9319_17960	COG1994	Peptidase M50
J9319_17965	COG1942	4-Oxalocrotonate Tautomerase
J9319_17975	COG2141	COG2141 Coenzyme F420-dependent N5,N10-methylene tetrahydromethanopterin reductase and related flavin-dependent oxidoreductases
J9319_17980	COG0583	DNA-binding transcription factor activity
J9319_17985	COG0431	NADPH-dependent FMN reductase
J9319_17990	COG2141	COG2141 Coenzyme F420-dependent N5,N10-methylene tetrahydromethanopterin reductase and related flavin-dependent oxidoreductases
J9319_17995	COG0695	Has a glutathione-disulfide oxidoreductase activity in the presence of NADPH and glutathione reductase. Reduces low molecular weight disulfides and proteins
J9319_18000	COG0454	-acetyltransferase
J9319_18005	COG0765	amino acid transport
J9319_18015	COG0765	amino acid transport
J9319_18020	COG1126	abc transporter atp-binding protein
J9319_18025	COG3465	dGTPase activity
J9319_18030	COG1078	dGTPase activity
J9319_18035	COG4844	belongs to the
J9319_18075	COG5444	nuclease activity
J9319_18105	COG0684	Catalyzes the aldol cleavage of 4-hydroxy-4-methyl-2- oxoglutarate (HMG) into 2 molecules of pyruvate. Also contains a secondary oxaloacetate (OAA) decarboxylase activity due to the common pyruvate enolate transition state formed following C-C bond cleavage in the retro-aldol and decarboxylation reactions
J9319_18115	COG0280	phosphate acetyltransferase
J9319_18125	COG2814	Major facilitator Superfamily
J9319_18130	COG1522	sequence-specific DNA binding
J9319_18135	COG2814	Major facilitator Superfamily
J9319_18140	COG0077	Prephenate dehydratase
J9319_18145	COG1917	Cupin 2, conserved barrel domain protein
J9319_18150	COG1028	Short-chain dehydrogenase reductase Sdr
J9319_18155	COG0151	Belongs to the GarS family
J9319_18160	COG0436	Aminotransferase
J9319_18165	COG1028	Short-chain dehydrogenase reductase Sdr
J9319_18170	COG1898	dTDP-4-dehydrorhamnose 3,5-epimerase activity
J9319_18175	COG1091	dTDP-4-dehydrorhamnose reductase activity
J9319_18180	COG1088	dTDP-glucose 4,6-dehydratase activity
J9319_18185	COG1209	Catalyzes the formation of dTDP-glucose, from dTTP and glucose 1-phosphate, as well as its pyrophosphorolysis
J9319_18190	COG3980	spore coat polysaccharide biosynthesis protein
J9319_18195	COG1861	Spore coat polysaccharide biosynthesis protein F CMP-KDO synthetase
J9319_18200	COG2089	acid synthase
J9319_18205	COG0456	acetyltransferase
J9319_18210	COG0399	UDP-4-amino-4-deoxy-L-arabinose aminotransferase
J9319_18215	COG1887	Glycosyl glycerophosphate transferases involved in teichoic acid biosynthesis TagF TagB EpsJ RodC
J9319_18220	COG0463	Glycosyl transferase, family 2
J9319_18240	COG2363	Small membrane protein
J9319_18245	COG2233	PERMEase
J9319_18255	COG1012	belongs to the aldehyde dehydrogenase family
J9319_18260	COG0692	Excises uracil residues from the DNA which can arise as a result of misincorporation of dUMP residues by DNA polymerase or due to deamination of cytosine
J9319_18265	COG1216	Glycosyl transferase, family 2
J9319_18275	COG0351	phosphomethylpyrimidine kinase
J9319_18310	COG1621	beta-fructofuranosidase activity
J9319_18315	COG1263	PTS System
J9319_18315	COG1264	protein-N(PI)-phosphohistidine-sugar phosphotransferase activity
J9319_18320	COG3711	transcriptional antiterminator
J9319_18330	COG1404	Belongs to the peptidase S8 family
J9319_18340	COG2141	COG2141 Coenzyme F420-dependent N5,N10-methylene tetrahydromethanopterin reductase and related flavin-dependent oxidoreductases
J9319_18345	COG0778	Nitroreductase
J9319_18350	COG0772	Belongs to the SEDS family
J9319_18360	COG3125	oxidoreductase activity, acting on diphenols and related substances as donors, oxygen as acceptor
J9319_18365	COG1845	cytochrome c oxidase, subunit III
J9319_18370	COG0843	Cytochrome c oxidase is the component of the respiratory chain that catalyzes the reduction of oxygen to water. Subunits 1- 3 form the functional core of the enzyme complex. CO I is the catalytic subunit of the enzyme. Electrons originating in cytochrome c are transferred via the copper A center of subunit 2 and heme A of subunit 1 to the bimetallic center formed by heme A3 and copper B
J9319_18375	COG1622	oxidoreductase activity, acting on a heme group of donors, oxygen as acceptor
J9319_18385	COG4468	UDPglucose--hexose-1-phosphate uridylyltransferase
J9319_18390	COG1087	Belongs to the NAD(P)-dependent epimerase dehydratase family
J9319_18395	COG0153	Catalyzes the transfer of the gamma-phosphate of ATP to D-galactose to form alpha-D-galactose-1-phosphate (Gal-1-P)
J9319_18410	COG2246	polysaccharide biosynthetic process
J9319_18430	COG3162	membrane
J9319_18435	COG4147	Belongs to the sodium solute symporter (SSF) (TC 2.A.21) family
J9319_18450	COG0352	thiamine-phosphate diphosphorylase activity
J9319_18455	COG2145	Catalyzes the phosphorylation of the hydroxyl group of 4-methyl-5-beta-hydroxyethylthiazole (THZ)
J9319_18460	COG0583	DNA-binding transcription factor activity
J9319_18465	COG1380	Effector of murein hydrolase LrgA
J9319_18470	COG1346	cytolysis
J9319_18475	COG1092	Specifically methylates the guanine in position 2445 (m2G2445) and the guanine in position 2069 (m7G2069) of 23S rRNA
J9319_18480	COG0346	lactoylglutathione lyase activity
J9319_18490	COG0765	amino acid transport
J9319_18495	COG0834	ABC-type amino acid transport signal transduction systems periplasmic component domain
J9319_18500	COG0457	Tetratricopeptide repeat
J9319_18510	COG2357	RelA SpoT domain protein
J9319_18515	COG1172	Belongs to the binding-protein-dependent transport system permease family
J9319_18520	COG1129	ABC transporter
J9319_18530	COG3420	alginic acid biosynthetic process
J9319_18535	COG0115	Belongs to the class-IV pyridoxal-phosphate-dependent aminotransferase family
J9319_18545	COG1486	melibiose metabolic process
J9319_18550	COG1447	Phosphotransferase system cellobiose-specific component IIA
J9319_18555	COG1455	protein-N(PI)-phosphohistidine-lactose phosphotransferase system transporter activity
J9319_18560	COG1440	protein-N(PI)-phosphohistidine-lactose phosphotransferase system transporter activity
J9319_18565	COG1762	phosphoenolpyruvate-dependent sugar phosphotransferase system
J9319_18565	COG3711	transcriptional antiterminator
J9319_18580	COG0334	Belongs to the Glu Leu Phe Val dehydrogenases family
J9319_18595	COG1595	DNA-templated transcription, initiation
J9319_18605	COG4987	ABC transporter, CydDC cysteine exporter (CydDC-E) family, permease ATP-binding protein CydC
J9319_18610	COG4988	ABC transporter
J9319_18615	COG1294	oxidase, subunit
J9319_18620	COG1271	oxidase subunit
J9319_18625	COG1120	ATPase activity
J9319_18630	COG0609	Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily
J9319_18635	COG4594	ABC-type Fe3 -citrate transport system, periplasmic component
J9319_18640	COG4509	Sortase family
J9319_18665	COG5386	Cell surface protein
J9319_18670	COG5386	Cell surface protein
J9319_18675	COG1733	regulation of RNA biosynthetic process
J9319_18680	COG2514	catechol 2,3-dioxygenase activity
J9319_18685	COG0807	Catalyzes the conversion of D-ribulose 5-phosphate to formate and 3,4-dihydroxy-2-butanone 4-phosphate
J9319_18685	COG0108	Catalyzes the conversion of D-ribulose 5-phosphate to formate and 3,4-dihydroxy-2-butanone 4-phosphate
J9319_18690	COG0117	Converts 2,5-diamino-6-(ribosylamino)-4(3h)-pyrimidinone 5'-phosphate into 5-amino-6-(ribosylamino)-2,4(1h,3h)- pyrimidinedione 5'-phosphate
J9319_18690	COG1985	Converts 2,5-diamino-6-(ribosylamino)-4(3h)-pyrimidinone 5'-phosphate into 5-amino-6-(ribosylamino)-2,4(1h,3h)- pyrimidinedione 5'-phosphate
J9319_18700	COG0726	polysaccharide deacetylase
J9319_18705	COG1447	Phosphotransferase system cellobiose-specific component IIA
J9319_18710	COG1440	protein-N(PI)-phosphohistidine-lactose phosphotransferase system transporter activity
J9319_18715	COG2723	6-phospho-beta-galactosidase activity
J9319_18725	COG1455	protein-N(PI)-phosphohistidine-lactose phosphotransferase system transporter activity
J9319_18730	COG3711	transcriptional antiterminator
J9319_18730	COG1762	phosphoenolpyruvate-dependent sugar phosphotransferase system
J9319_18755	COG1757	Na H antiporter
J9319_18760	COG1027	Aspartate ammonia-lyase
J9319_18765	COG0252	asparaginase activity
J9319_18770	COG1396	sequence-specific DNA binding
J9319_18795	COG4842	Belongs to the WXG100 family
J9319_18800	COG2195	Cleaves the N-terminal amino acid of tripeptides
J9319_18815	COG1737	Transcriptional regulator
J9319_18820	COG2084	Dehydrogenase
J9319_18830	COG2610	gluconate transmembrane transporter activity
J9319_18835	COG0620	Catalyzes the transfer of a methyl group from 5- methyltetrahydrofolate to homocysteine resulting in methionine formation
J9319_18845	COG1136	(ABC) transporter
J9319_18865	COG2723	6-phospho-beta-galactosidase activity
J9319_18870	COG2190	(PTS) system
J9319_18870	COG1263	PTS System
J9319_18870	COG1264	protein-N(PI)-phosphohistidine-sugar phosphotransferase activity
J9319_18875	COG3711	transcriptional antiterminator
J9319_18880	COG3878	Protein conserved in bacteria
J9319_18890	COG0619	Transmembrane (T) component of an energy-coupling factor (ECF) ABC-transporter complex. Unlike classic ABC transporters this ECF transporter provides the energy necessary to transport a number of different substrates
J9319_18895	COG1122	ATPase activity
J9319_18900	COG4721	ABC-type cobalt transport system, permease component
J9319_18905	COG0819	Catalyzes an amino-pyrimidine hydrolysis reaction at the C5' of the pyrimidine moiety of thiamine compounds, a reaction that is part of a thiamine salvage pathway
J9319_18940	COG1359	(4S)-4-hydroxy-5-phosphonooxypentane-2,3-dione isomerase activity
J9319_18945	COG0778	Nitroreductase
J9319_18950	COG1846	Transcriptional regulator
J9319_18955	COG0213	The enzymes which catalyze the reversible phosphorolysis of pyrimidine nucleosides are involved in the degradation of these compounds and in their utilization as carbon and energy sources, or in the rescue of pyrimidine bases for nucleotide synthesis
J9319_18960	COG1972	Belongs to the concentrative nucleoside transporter (CNT) (TC 2.A.41) family
J9319_18965	COG0274	Catalyzes a reversible aldol reaction between acetaldehyde and D-glyceraldehyde 3-phosphate to generate 2-deoxy- D-ribose 5-phosphate
J9319_18970	COG2390	Transcriptional regulator
J9319_18980	COG1835	transferase activity, transferring acyl groups other than amino-acyl groups
J9319_18980	COG2755	lipolytic protein G-D-S-L family
J9319_18985	COG0477	Major facilitator Superfamily
J9319_18990	COG0373	Catalyzes the NADPH-dependent reduction of glutamyl- tRNA(Glu) to glutamate 1-semialdehyde (GSA)
J9319_18995	COG2226	methyltransferase
J9319_19005	COG0561	phosphatase activity
J9319_19010	COG0789	Transcriptional regulator
J9319_19015	COG0673	inositol 2-dehydrogenase activity
J9319_19020	COG0840	transmembrane signaling receptor activity
J9319_19025	COG1113	amino acid transport
J9319_19030	COG4335	DNA alkylation repair
J9319_19040	COG1070	Carbohydrate kinase
J9319_19045	COG1737	Transcriptional regulator
J9319_19075	COG0583	DNA-binding transcription factor activity
J9319_19080	COG1609	Transcriptional regulator
J9319_19085	COG2182	Extracellular solute-binding protein
J9319_19090	COG1175	transmembrane transport
J9319_19095	COG3833	ABC-type maltose transport systems, permease component
J9319_19105	COG1874	Beta-galactosidase
J9319_19110	COG2851	Citrate transporter
J9319_19120	COG1277	ABC-type transport system involved in multi-copper enzyme maturation permease component
J9319_19125	COG1131	(ABC) transporter
J9319_19130	COG2824	Alkylphosphonate utilization operon protein PhnA
J9319_19135	COG1929	Belongs to the glycerate kinase type-1 family
J9319_19140	COG2610	gluconate transmembrane transporter activity
J9319_19145	COG3835	regulator
J9319_19150	COG1309	transcriptional regulator
J9319_19155	COG2814	Major facilitator Superfamily
J9319_19165	COG1136	(ABC) transporter
J9319_19175	COG0457	Tetratricopeptide repeat
J9319_19180	COG3711	transcriptional antiterminator
J9319_19185	COG2723	6-phospho-beta-galactosidase activity
J9319_19190	COG1263	PTS System
J9319_19190	COG1264	protein-N(PI)-phosphohistidine-sugar phosphotransferase activity
J9319_19190	COG2190	(PTS) system
J9319_19215	COG0494	nUDIX hydrolase
J9319_19230	COG1113	amino acid transport
J9319_19235	COG1609	Transcriptional regulator
J9319_19240	COG2814	Major facilitator Superfamily
J9319_19245	COG0169	Involved in the biosynthesis of the chorismate, which leads to the biosynthesis of aromatic amino acids. Catalyzes the reversible NADPH linked reduction of 3-dehydroshikimate (DHSA) to yield shikimate (SA)
J9319_19250	COG2814	Major facilitator Superfamily
J9319_19255	COG2723	6-phospho-beta-galactosidase activity
J9319_19265	COG1264	protein-N(PI)-phosphohistidine-sugar phosphotransferase activity
J9319_19265	COG1263	PTS System
J9319_19265	COG2190	(PTS) system
J9319_19280	COG5444	nuclease activity
J9319_19290	COG2723	6-phospho-beta-galactosidase activity
J9319_19295	COG2190	(PTS) system
J9319_19295	COG1263	PTS System
J9319_19295	COG1264	protein-N(PI)-phosphohistidine-sugar phosphotransferase activity
J9319_19300	COG2188	Transcriptional regulator
J9319_19315	COG0384	phenazine biosynthesis protein PhzF
J9319_19320	COG0583	DNA-binding transcription factor activity
J9319_19340	COG0664	- Catabolite gene activator and regulatory subunit of cAMP-dependent protein
J9319_19355	COG5002	protein histidine kinase activity
J9319_19355	COG3850	Histidine kinase
J9319_19365	COG2409	Drug exporters of the RND superfamily
J9319_19370	COG0491	Thiolesterase that catalyzes the hydrolysis of S-D- lactoyl-glutathione to form glutathione and D-lactic acid
J9319_19380	COG1078	dGTPase activity
J9319_19385	COG1576	Specifically methylates the pseudouridine at position 1915 (m3Psi1915) in 23S rRNA
J9319_19395	COG0619	Transmembrane (T) component of an energy-coupling factor (ECF) ABC-transporter complex. Unlike classic ABC transporters this ECF transporter provides the energy necessary to transport a number of different substrates
J9319_19405	COG4720	Psort location CytoplasmicMembrane, score
J9319_19425	COG0456	acetyltransferase
J9319_19430	COG0265	Trypsin-like serine proteases, typically periplasmic, contain C-terminal PDZ domain
J9319_19435	COG1235	May be involved in the transport of PQQ or its precursor to the periplasm
J9319_19440	COG4853	Protein conserved in bacteria
J9319_19445	COG4863	YycH protein
J9319_19450	COG5002	protein histidine kinase activity
J9319_19455	COG0745	RESPONSE REGULATOR receiver
J9319_19480	COG1225	Alkyl hydroperoxide reductase Thiol specific antioxidant Mal allergen
J9319_19490	COG2311	Membrane
J9319_19495	COG0104	Plays an important role in the de novo pathway of purine nucleotide biosynthesis. Catalyzes the first committed step in the biosynthesis of AMP from IMP
J9319_19500	COG1309	transcriptional regulator
J9319_19505	COG2124	cytochrome p450
J9319_19510	COG0346	lactoylglutathione lyase activity
J9319_19515	COG0305	Participates in initiation and elongation during chromosome replication
J9319_19530	COG2819	hydrolase of the alpha beta superfamily
J9319_19535	COG2207	Transcriptional regulator
J9319_19535	COG0614	abc-type fe3 -hydroxamate transport system, periplasmic component
J9319_19540	COG0614	abc-type fe3 -hydroxamate transport system, periplasmic component
J9319_19545	COG2819	hydrolase of the alpha beta superfamily
J9319_19550	COG3093	addiction module antidote protein HigA
J9319_19555	COG2807	transmembrane transport
J9319_19560	COG0359	binds to the 23S rRNA
J9319_19565	COG3887	signaling protein consisting of a modified GGDEF domain and a DHH domain
J9319_19570	COG4241	membrane
J9319_19575	COG1227	inorganic diphosphatase activity
J9319_19585	COG1595	DNA-templated transcription, initiation
J9319_19595	COG0753	catalase activity
J9319_19600	COG0655	NAD(P)H dehydrogenase (quinone) activity
J9319_19605	COG0400	carboxylic ester hydrolase activity
J9319_19610	COG0346	lactoylglutathione lyase activity
J9319_19615	COG1174	glycine betaine transport
J9319_19620	COG0517	IMP dehydrogenase activity
J9319_19620	COG1125	glycine betaine transport
J9319_19625	COG0238	Binds as a heterodimer with protein S6 to the central domain of the 16S rRNA, where it helps stabilize the platform of the 30S subunit
J9319_19630	COG0629	single-stranded DNA binding
J9319_19635	COG0360	Binds together with S18 to 16S ribosomal RNA
J9319_19640	COG0012	GTP binding
J9319_19645	COG4481	Protein conserved in bacteria
J9319_19660	COG3949	Membrane
J9319_19670	COG1475	DNA binding
J9319_19675	COG1192	Involved in chromosome partitioning
J9319_19685	COG1475	DNA binding
J9319_19690	COG0357	Ribosomal RNA small subunit methyltransferase G
J9319_19695	COG0445	tRNA wobble uridine modification
J9319_19700	COG0486	Exhibits a very high intrinsic GTPase hydrolysis rate. Involved in the addition of a carboxymethylaminomethyl (cmnm) group at the wobble position (U34) of certain tRNAs, forming tRNA- cmnm(5)s(2)U34
J9319_19705	COG1847	R3H domain protein
J9319_19710	COG0706	membrane insertase activity
J9319_19715	COG0594	ribonuclease P activity
J9319_19720	COG0230	Belongs to the bacterial ribosomal protein bL34 family