locus-tag class description INQ56_00005 PF00308 Bacterial dnaA protein INQ56_00005 PF08299 Bacterial dnaA protein helix-turn-helix INQ56_00005 PF11638 DnaA N-terminal domain INQ56_00010 PF02767 DNA polymerase III beta subunit, central domain INQ56_00010 PF02768 DNA polymerase III beta subunit, C-terminal domain INQ56_00010 PF00712 DNA polymerase III beta subunit, N-terminal domain INQ56_00020 PF02463 RecF/RecN/SMC N terminal domain INQ56_00025 PF04025 Domain of unknown function (DUF370) INQ56_00030 PF00204 DNA gyrase B INQ56_00030 PF00986 DNA gyrase B subunit, carboxyl terminus INQ56_00030 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase INQ56_00030 PF01751 Toprim domain INQ56_00035 PF03989 DNA gyrase C-terminal domain, beta-propeller INQ56_00035 PF00521 DNA gyrase/topoisomerase IV, subunit A INQ56_00065 PF14175 YaaC-like Protein INQ56_00070 PF00478 IMP dehydrogenase / GMP reductase domain INQ56_00070 PF00571 CBS domain INQ56_00075 PF00768 D-alanyl-D-alanine carboxypeptidase INQ56_00075 PF07943 Penicillin-binding protein 5, C-terminal domain INQ56_00080 PF00155 Aminotransferase class I and II INQ56_00080 PF00392 Bacterial regulatory proteins, gntR family INQ56_00085 PF01680 SOR/SNZ family INQ56_00090 PF01174 SNO glutamine amidotransferase family INQ56_00095 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) INQ56_00095 PF02403 Seryl-tRNA synthetase N-terminal domain INQ56_00100 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain INQ56_00110 PF01712 Deoxynucleoside kinase INQ56_00115 PF01712 Deoxynucleoside kinase INQ56_00120 PF01476 LysM domain INQ56_00120 PF00704 Glycosyl hydrolases family 18 INQ56_00125 PF00857 Isochorismatase family INQ56_00130 PF14437 MafB19-like deaminase INQ56_00140 PF12169 DNA polymerase III subunits gamma and tau domain III INQ56_00145 PF02575 YbaB/EbfC DNA-binding family INQ56_00150 PF02132 RecR protein INQ56_00150 PF13662 Toprim domain INQ56_00155 PF10704 Protein of unknown function (DUF2508) INQ56_00160 PF07441 SigmaK-factor processing regulatory protein BofA INQ56_00190 PF10764 Inhibitor of sigma-G Gin INQ56_00195 PF10112 5-bromo-4-chloroindolyl phosphate hydrolysis protein INQ56_00200 PF05816 Toxic anion resistance protein (TelA) INQ56_00205 PF01276 Orn/Lys/Arg decarboxylase, major domain INQ56_00205 PF03711 Orn/Lys/Arg decarboxylase, C-terminal domain INQ56_00210 PF02223 Thymidylate kinase INQ56_00215 PF06153 Cyclic-di-AMP receptor INQ56_00220 PF03885 Protein of unknown function (DUF327) INQ56_00225 PF09115 DNA polymerase III, delta subunit, C terminal INQ56_00230 PF04468 PSP1 C-terminal conserved region INQ56_00235 PF06156 Initiation control protein YabA INQ56_00240 PF05175 Methyltransferase small domain INQ56_00245 PF01541 GIY-YIG catalytic domain INQ56_00250 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases INQ56_00255 PF18277 AbrB C-terminal domain INQ56_00255 PF04014 Antidote-toxin recognition MazE, bacterial antitoxin INQ56_00260 PF08264 Anticodon-binding domain of tRNA INQ56_00260 PF09334 tRNA synthetases class I (M) INQ56_00260 PF01588 Putative tRNA binding domain INQ56_00265 PF01026 TatD related DNase INQ56_00270 PF03990 G5-linked-Ubiquitin-like domain INQ56_00270 PF07501 G5 domain INQ56_00270 PF06725 3D domain INQ56_00275 PF13331 Domain of unknown function (DUF4093) INQ56_00275 PF13662 Toprim domain INQ56_00280 PF00398 Ribosomal RNA adenine dimethylase INQ56_00285 PF05582 YabG peptidase U57 INQ56_00290 PF06257 Biofilm formation stimulator VEG INQ56_00295 PF00269 Small, acid-soluble spore proteins, alpha/beta type INQ56_00300 PF08544 GHMP kinases C terminal INQ56_00300 PF00288 GHMP kinases N terminal domain INQ56_00305 PF00156 Phosphoribosyl transferase domain INQ56_00305 PF09182 Bacterial purine repressor, N-terminal INQ56_00310 PF01042 Endoribonuclease L-PSP INQ56_00315 PF04026 SpoVG INQ56_00320 PF00483 Nucleotidyl transferase INQ56_00320 PF00132 Bacterial transferase hexapeptide (six repeats) INQ56_00325 PF13793 N-terminal domain of ribose phosphate pyrophosphokinase INQ56_00325 PF14572 Phosphoribosyl synthetase-associated domain INQ56_00330 PF01386 Ribosomal L25p family INQ56_00330 PF14693 Ribosomal protein TL5, C-terminal domain INQ56_00335 PF01195 Peptidyl-tRNA hydrolase INQ56_00340 PF10955 Protein of unknown function (DUF2757) INQ56_00345 PF17757 UvrB interaction domain INQ56_00345 PF00271 Helicase conserved C-terminal domain INQ56_00345 PF00270 DEAD/DEAH box helicase INQ56_00345 PF03461 TRCF domain INQ56_00345 PF02559 CarD-like/TRCF domain INQ56_00350 PF04014 Antidote-toxin recognition MazE, bacterial antitoxin INQ56_00350 PF15714 Stage V sporulation protein T C-terminal, transcription factor INQ56_00355 PF14667 Polysaccharide biosynthesis C-terminal domain INQ56_00355 PF01943 Polysaccharide biosynthesis protein INQ56_00360 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases INQ56_00360 PF03819 MazG nucleotide pyrophosphohydrolase domain INQ56_00365 PF01479 S4 domain INQ56_00370 PF07873 YabP family INQ56_00375 PF09578 Spore cortex protein YabQ (Spore_YabQ) INQ56_00380 PF04977 Septum formation initiator INQ56_00385 PF00575 S1 RNA binding domain INQ56_00400 PF07228 Stage II sporulation protein E (SpoIIE) INQ56_00405 PF00092 von Willebrand factor type A domain INQ56_00410 PF00069 Protein kinase domain INQ56_00415 PF01171 PP-loop family INQ56_00415 PF09179 TilS substrate binding domain INQ56_00415 PF11734 TilS substrate C-terminal domain INQ56_00420 PF00156 Phosphoribosyl transferase domain INQ56_00425 PF01434 Peptidase family M41 INQ56_00425 PF00004 ATPase family associated with various cellular activities (AAA) INQ56_00425 PF06480 FtsH Extracellular INQ56_00425 PF17862 AAA+ lid domain INQ56_00430 PF03309 Type III pantothenate kinase INQ56_00435 PF01430 Hsp33 protein INQ56_00440 PF13145 PPIC-type PPIASE domain INQ56_00445 PF00291 Pyridoxal-phosphate dependent enzyme INQ56_00450 PF00425 chorismate binding enzyme INQ56_00450 PF04715 Anthranilate synthase component I, N terminal region INQ56_00455 PF00117 Glutamine amidotransferase class-I INQ56_00460 PF01063 Amino-transferase class IV INQ56_00465 PF00809 Pterin binding enzyme INQ56_00470 PF02152 Dihydroneopterin aldolase INQ56_00475 PF01288 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK) INQ56_00480 PF01381 Helix-turn-helix INQ56_00485 PF01207 Dihydrouridine synthase (Dus) INQ56_00490 PF00152 tRNA synthetases class II (D, K and N) INQ56_00490 PF01336 OB-fold nucleic acid binding domain INQ56_00570 PF05848 CtsR N-terminal HTH domain INQ56_00570 PF17727 CtsR C-terminal dimerization domain INQ56_00575 PF02151 UvrB/uvrC motif INQ56_00580 PF00217 ATP:guanido phosphotransferase, C-terminal catalytic domain INQ56_00585 PF10431 C-terminal, D2-small domain, of ClpB protein INQ56_00585 PF00004 ATPase family associated with various cellular activities (AAA) INQ56_00585 PF07724 AAA domain (Cdc48 subfamily) INQ56_00585 PF17871 AAA lid domain INQ56_00585 PF02861 Clp amino terminal domain, pathogenicity island component INQ56_00590 PF18073 Rubredoxin metal binding domain INQ56_00595 PF10635 DisA bacterial checkpoint controller linker region INQ56_00595 PF02457 DisA bacterial checkpoint controller nucleotide-binding INQ56_00605 PF01128 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase INQ56_00610 PF02542 YgbB family INQ56_00615 PF00749 tRNA synthetases class I (E and Q), catalytic domain INQ56_00620 PF00132 Bacterial transferase hexapeptide (six repeats) INQ56_00620 PF06426 Serine acetyltransferase, N-terminal INQ56_00625 PF01406 tRNA synthetases class I (C) catalytic domain INQ56_00625 PF09190 DALR domain INQ56_00630 PF00636 Ribonuclease III domain INQ56_00635 PF00588 SpoU rRNA Methylase family INQ56_00635 PF08032 RNA 2'-O ribose methyltransferase substrate binding INQ56_00640 PF05991 YacP-like NYN domain INQ56_00645 PF08281 Sigma-70, region 4 INQ56_00645 PF04542 Sigma-70 region 2 INQ56_00650 PF00471 Ribosomal protein L33 INQ56_00655 PF00584 SecE/Sec61-gamma subunits of protein translocation complex INQ56_00660 PF02357 Transcription termination factor nusG INQ56_00660 PF00467 KOW motif INQ56_00665 PF03946 Ribosomal protein L11, N-terminal domain INQ56_00665 PF00298 Ribosomal protein L11, RNA binding domain INQ56_00670 PF00687 Ribosomal protein L1p/L10e family INQ56_00675 PF00466 Ribosomal protein L10 INQ56_00680 PF16320 Ribosomal protein L7/L12 dimerisation domain INQ56_00680 PF00542 Ribosomal protein L7/L12 C-terminal domain INQ56_00685 PF05175 Methyltransferase small domain INQ56_00690 PF04560 RNA polymerase Rpb2, domain 7 INQ56_00690 PF04563 RNA polymerase beta subunit INQ56_00690 PF00562 RNA polymerase Rpb2, domain 6 INQ56_00690 PF04565 RNA polymerase Rpb2, domain 3 INQ56_00690 PF10385 RNA polymerase beta subunit external 1 domain INQ56_00690 PF04561 RNA polymerase Rpb2, domain 2 INQ56_00695 PF04983 RNA polymerase Rpb1, domain 3 INQ56_00695 PF04997 RNA polymerase Rpb1, domain 1 INQ56_00695 PF00623 RNA polymerase Rpb1, domain 2 INQ56_00695 PF04998 RNA polymerase Rpb1, domain 5 INQ56_00695 PF05000 RNA polymerase Rpb1, domain 4 INQ56_00700 PF01248 Ribosomal protein L7Ae/L30e/S12e/Gadd45 family INQ56_00705 PF00164 Ribosomal protein S12/S23 INQ56_00710 PF00177 Ribosomal protein S7p/S5e INQ56_00715 PF00679 Elongation factor G C-terminus INQ56_00715 PF00009 Elongation factor Tu GTP binding domain INQ56_00715 PF03764 Elongation factor G, domain IV INQ56_00715 PF14492 Elongation Factor G, domain II INQ56_00715 PF03144 Elongation factor Tu domain 2 INQ56_00720 PF00009 Elongation factor Tu GTP binding domain INQ56_00720 PF03144 Elongation factor Tu domain 2 INQ56_00720 PF03143 Elongation factor Tu C-terminal domain INQ56_00725 PF12146 Serine aminopeptidase, S33 INQ56_00730 PF00338 Ribosomal protein S10p/S20e INQ56_00735 PF00297 Ribosomal protein L3 INQ56_00740 PF00573 Ribosomal protein L4/L1 family INQ56_00745 PF00276 Ribosomal protein L23 INQ56_00750 PF03947 Ribosomal Proteins L2, C-terminal domain INQ56_00750 PF00181 Ribosomal Proteins L2, RNA binding domain INQ56_00755 PF00203 Ribosomal protein S19 INQ56_00760 PF00237 Ribosomal protein L22p/L17e INQ56_00765 PF07650 KH domain INQ56_00765 PF00189 Ribosomal protein S3, C-terminal domain INQ56_00770 PF00252 Ribosomal protein L16p/L10e INQ56_00775 PF00831 Ribosomal L29 protein INQ56_00780 PF00366 Ribosomal protein S17 INQ56_00785 PF00238 Ribosomal protein L14p/L23e INQ56_00790 PF17136 Ribosomal proteins 50S L24/mitochondrial 39S L24 INQ56_00790 PF00467 KOW motif INQ56_00795 PF00673 ribosomal L5P family C-terminus INQ56_00795 PF00281 Ribosomal protein L5 INQ56_00800 PF00253 Ribosomal protein S14p/S29e INQ56_00805 PF00410 Ribosomal protein S8 INQ56_00810 PF00347 Ribosomal protein L6 INQ56_00815 PF00861 Ribosomal L18 of archaea, bacteria, mitoch. and chloroplast INQ56_00820 PF03719 Ribosomal protein S5, C-terminal domain INQ56_00820 PF00333 Ribosomal protein S5, N-terminal domain INQ56_00825 PF00327 Ribosomal protein L30p/L7e INQ56_00830 PF00828 Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27A INQ56_00835 PF00344 SecY translocase INQ56_00840 PF05191 Adenylate kinase, active site lid INQ56_00845 PF00557 Metallopeptidase family M24 INQ56_00850 PF01176 Translation initiation factor 1A / IF-1 INQ56_00855 PF00444 Ribosomal protein L36 INQ56_00860 PF00416 Ribosomal protein S13/S18 INQ56_00865 PF00411 Ribosomal protein S11 INQ56_00870 PF01193 RNA polymerase Rpb3/Rpb11 dimerisation domain INQ56_00870 PF03118 Bacterial RNA polymerase, alpha chain C terminal domain INQ56_00870 PF01000 RNA polymerase Rpb3/RpoA insert domain INQ56_00875 PF01196 Ribosomal protein L17 INQ56_00880 PF00005 ABC transporter INQ56_00885 PF00005 ABC transporter INQ56_00890 PF02361 Cobalt transport protein INQ56_00895 PF01416 tRNA pseudouridine synthase INQ56_00900 PF00572 Ribosomal protein L13 INQ56_00905 PF00380 Ribosomal protein S9/S16 INQ56_00910 PF13302 Acetyltransferase (GNAT) domain INQ56_00930 PF10730 Protein of unknown function (DUF2521) INQ56_00935 PF01520 N-acetylmuramoyl-L-alanine amidase INQ56_00940 PF10609 NUBPL iron-transfer P-loop NTPase INQ56_00945 PF17898 Spore germination GerD central core domain INQ56_00950 PF14089 KinB-signalling pathway activation in sporulation INQ56_00955 PF01522 Polysaccharide deacetylase INQ56_00985 PF01740 STAS domain INQ56_00985 PF00916 Sulfate permease family INQ56_00990 PF01758 Sodium Bile acid symporter family INQ56_00995 PF07075 Protein of unknown function (DUF1343) INQ56_01000 PF00933 Glycosyl hydrolase family 3 N terminal domain INQ56_01000 PF01915 Glycosyl hydrolase family 3 C-terminal domain INQ56_01005 PF00144 Beta-lactamase INQ56_01010 PF02378 Phosphotransferase system, EIIC INQ56_01010 PF00367 phosphotransferase system, EIIB INQ56_01015 PF01380 SIS domain INQ56_01015 PF01418 Helix-turn-helix domain, rpiR family INQ56_01020 PF13580 SIS domain INQ56_01050 PF00491 Arginase family INQ56_01055 PF04542 Sigma-70 region 2 INQ56_01055 PF08281 Sigma-70, region 4 INQ56_01060 PF13490 Putative zinc-finger INQ56_01065 PF02457 DisA bacterial checkpoint controller nucleotide-binding INQ56_01070 PF07949 YbbR-like protein INQ56_01075 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain INQ56_01075 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II INQ56_01075 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III INQ56_01075 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I INQ56_01080 PF01380 SIS domain INQ56_01090 PF02086 D12 class N6 adenine-specific DNA methyltransferase INQ56_01100 PF00005 ABC transporter INQ56_01100 PF13732 Domain of unknown function (DUF4162) INQ56_01110 PF02687 FtsX-like permease family INQ56_01110 PF12704 MacB-like periplasmic core domain INQ56_01110 PF00005 ABC transporter INQ56_01115 PF12704 MacB-like periplasmic core domain INQ56_01115 PF02687 FtsX-like permease family INQ56_01115 PF00005 ABC transporter INQ56_01120 PF10400 Virulence activator alpha C-term INQ56_01120 PF03551 Transcriptional regulator PadR-like family INQ56_01130 PF00005 ABC transporter INQ56_01145 PF13905 Thioredoxin-like INQ56_01155 PF00668 Condensation domain INQ56_01155 PF13193 AMP-binding enzyme C-terminal domain INQ56_01155 PF07993 Male sterility protein INQ56_01155 PF00501 AMP-binding enzyme INQ56_01155 PF00550 Phosphopantetheine attachment site INQ56_01160 PF04235 Protein of unknown function (DUF418) INQ56_01170 PF00005 ABC transporter INQ56_01180 PF01381 Helix-turn-helix INQ56_01190 PF00561 alpha/beta hydrolase fold INQ56_01195 PF12833 Helix-turn-helix domain INQ56_01200 PF00440 Bacterial regulatory proteins, tetR family INQ56_01200 PF17922 Tetracyclin repressor-like, C-terminal domain INQ56_01215 PF00324 Amino acid permease INQ56_01220 PF03009 Glycerophosphoryl diester phosphodiesterase family INQ56_01225 PF07690 Major Facilitator Superfamily INQ56_01235 PF03190 Protein of unknown function, DUF255 INQ56_01245 PF02801 Beta-ketoacyl synthase, C-terminal domain INQ56_01245 PF00109 Beta-ketoacyl synthase, N-terminal domain INQ56_01280 PF02583 Metal-sensitive transcriptional repressor INQ56_01285 PF13686 DsrE/DsrF/DrsH-like family INQ56_01295 PF01206 Sulfurtransferase TusA INQ56_01295 PF00581 Rhodanese-like domain INQ56_01300 PF00581 Rhodanese-like domain INQ56_01300 PF00753 Metallo-beta-lactamase superfamily INQ56_01305 PF01206 Sulfurtransferase TusA INQ56_01310 PF01925 Sulfite exporter TauE/SafE INQ56_01320 PF03129 Anticodon binding domain INQ56_01320 PF09180 Prolyl-tRNA synthetase, C-terminal INQ56_01320 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) INQ56_01325 PF07690 Major Facilitator Superfamily INQ56_01340 PF01047 MarR family INQ56_01345 PF04463 Protein of unknown function (DUF523) INQ56_01355 PF00248 Aldo/keto reductase family INQ56_01365 PF00465 Iron-containing alcohol dehydrogenase INQ56_01370 PF12368 Rhodanase C-terminal INQ56_01370 PF00581 Rhodanese-like domain INQ56_01370 PF17773 UPF0176 acylphosphatase like domain INQ56_01375 PF13520 Amino acid permease INQ56_01385 PF03123 CAT RNA binding domain INQ56_01385 PF00874 PRD domain INQ56_01390 PF02378 Phosphotransferase system, EIIC INQ56_01390 PF00367 phosphotransferase system, EIIB INQ56_01390 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 INQ56_01395 PF00232 Glycosyl hydrolase family 1 INQ56_01410 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 INQ56_01410 PF00874 PRD domain INQ56_01410 PF08279 HTH domain INQ56_01410 PF05043 Mga helix-turn-helix domain INQ56_01415 PF00480 ROK family INQ56_01420 PF09261 Alpha mannosidase middle domain INQ56_01420 PF01074 Glycosyl hydrolases family 38 N-terminal domain INQ56_01420 PF07748 Glycosyl hydrolases family 38 C-terminal domain INQ56_01430 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit INQ56_01435 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 INQ56_01435 PF00381 PTS HPr component phosphorylation site INQ56_01440 PF17936 Bacterial Ig domain INQ56_01440 PF00082 Subtilase family INQ56_01455 PF00324 Amino acid permease INQ56_01460 PF02574 Homocysteine S-methyltransferase INQ56_01465 PF02588 Uncharacterised 5xTM membrane BCR, YitT family COG1284 INQ56_01465 PF10035 Uncharacterized protein conserved in bacteria (DUF2179) INQ56_01485 PF07690 Major Facilitator Superfamily INQ56_01490 PF00583 Acetyltransferase (GNAT) family INQ56_01505 PF00082 Subtilase family INQ56_01510 PF01425 Amidase INQ56_01515 PF00440 Bacterial regulatory proteins, tetR family INQ56_01520 PF07883 Cupin domain INQ56_01525 PF08240 Alcohol dehydrogenase GroES-like domain INQ56_01525 PF00107 Zinc-binding dehydrogenase INQ56_01525 PF13823 Alcohol dehydrogenase GroES-associated INQ56_01530 PF01047 MarR family INQ56_01535 PF00501 AMP-binding enzyme INQ56_01535 PF13193 AMP-binding enzyme C-terminal domain INQ56_01540 PF13520 Amino acid permease INQ56_01550 PF00561 alpha/beta hydrolase fold INQ56_01555 PF01235 Sodium:alanine symporter family INQ56_01560 PF04960 Glutaminase INQ56_01565 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase INQ56_01570 PF00072 Response regulator receiver domain INQ56_01570 PF08664 YcbB domain INQ56_01575 PF02810 SEC-C motif INQ56_01575 PF05225 helix-turn-helix, Psq domain INQ56_01580 PF11611 Domain of unknown function (DUF4352) INQ56_01580 PF17118 Domain of unknown function (DUF5105) INQ56_01585 PF00248 Aldo/keto reductase family INQ56_01590 PF14501 GHKL domain INQ56_01595 PF04397 LytTr DNA-binding domain INQ56_01595 PF00072 Response regulator receiver domain INQ56_01600 PF00005 ABC transporter INQ56_01605 PF12679 ABC-2 family transporter protein INQ56_01615 PF11611 Domain of unknown function (DUF4352) INQ56_01615 PF17118 Domain of unknown function (DUF5105) INQ56_01620 PF07486 Cell Wall Hydrolase INQ56_01635 PF00296 Luciferase-like monooxygenase INQ56_01640 PF02342 TerD domain INQ56_01645 PF02342 TerD domain INQ56_01650 PF02342 TerD domain INQ56_01655 PF03741 Integral membrane protein TerC family INQ56_01680 PF14266 Putative component of 'biosynthetic module' INQ56_01685 PF05816 Toxic anion resistance protein (TelA) INQ56_01690 PF00571 CBS domain INQ56_01690 PF00005 ABC transporter INQ56_01695 PF00528 Binding-protein-dependent transport system inner membrane component INQ56_01700 PF04069 Substrate binding domain of ABC-type glycine betaine transport system INQ56_01715 PF01546 Peptidase family M20/M25/M40 INQ56_01715 PF07687 Peptidase dimerisation domain INQ56_01720 PF03606 C4-dicarboxylate anaerobic carrier INQ56_01725 PF02866 lactate/malate dehydrogenase, alpha/beta C-terminal domain INQ56_01725 PF00056 lactate/malate dehydrogenase, NAD binding domain INQ56_01730 PF02652 L-lactate permease INQ56_01735 PF00356 Bacterial regulatory proteins, lacI family INQ56_01740 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family INQ56_01745 PF05116 Sucrose-6F-phosphate phosphohydrolase INQ56_01750 PF01408 Oxidoreductase family, NAD-binding Rossmann fold INQ56_01750 PF02894 Oxidoreductase family, C-terminal alpha/beta domain INQ56_01755 PF07690 Major Facilitator Superfamily INQ56_01760 PF01810 LysE type translocator INQ56_01770 PF10852 Protein of unknown function (DUF2651) INQ56_01775 PF08892 YqcI/YcgG family INQ56_01780 PF00324 Amino acid permease INQ56_01785 PF09347 Domain of unknown function (DUF1989) INQ56_01790 PF02540 NAD synthase INQ56_01800 PF00171 Aldehyde dehydrogenase family INQ56_01805 PF01487 Type I 3-dehydroquinase INQ56_01810 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain INQ56_01810 PF00205 Thiamine pyrophosphate enzyme, central domain INQ56_01810 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain INQ56_01820 PF02515 CoA-transferase family III INQ56_01825 PF07690 Major Facilitator Superfamily INQ56_01835 PF09339 IclR helix-turn-helix domain INQ56_01835 PF01614 Bacterial transcriptional regulator INQ56_01840 PF01202 Shikimate kinase INQ56_01845 PF00701 Dihydrodipicolinate synthetase family INQ56_01850 PF00356 Bacterial regulatory proteins, lacI family INQ56_01855 PF07690 Major Facilitator Superfamily INQ56_01860 PF08241 Methyltransferase domain INQ56_01865 PF03466 LysR substrate binding domain INQ56_01865 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family INQ56_01870 PF00795 Carbon-nitrogen hydrolase INQ56_01875 PF05448 Acetyl xylan esterase (AXE1) INQ56_01885 PF10127 RNA repair pathway DNA polymerase beta family INQ56_01890 PF01619 Proline dehydrogenase INQ56_01895 PF00171 Aldehyde dehydrogenase family INQ56_01900 PF17853 GGDEF-like domain INQ56_01900 PF13556 PucR C-terminal helix-turn-helix domain INQ56_01905 PF02040 Arsenical pump membrane protein INQ56_01910 PF00528 Binding-protein-dependent transport system inner membrane component INQ56_01915 PF00497 Bacterial extracellular solute-binding proteins, family 3 INQ56_01920 PF10925 Protein of unknown function (DUF2680) INQ56_01925 PF12706 Beta-lactamase superfamily domain INQ56_01930 PF01037 Lrp/AsnC ligand binding domain INQ56_01935 PF02522 Aminoglycoside 3-N-acetyltransferase INQ56_01940 PF11033 Competence protein J (ComJ) INQ56_01945 PF17202 Single cache domain 3 INQ56_01945 PF00672 HAMP domain INQ56_01945 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain INQ56_01950 PF14040 Deoxyribonuclease NucA/NucB INQ56_01955 PF05378 Hydantoinase/oxoprolinase N-terminal region INQ56_01955 PF01968 Hydantoinase/oxoprolinase INQ56_01970 PF00005 ABC transporter INQ56_01970 PF08402 TOBE domain INQ56_01975 PF00528 Binding-protein-dependent transport system inner membrane component INQ56_01980 PF00528 Binding-protein-dependent transport system inner membrane component INQ56_01985 PF00550 Phosphopantetheine attachment site INQ56_01985 PF00668 Condensation domain INQ56_01985 PF13193 AMP-binding enzyme C-terminal domain INQ56_01985 PF00501 AMP-binding enzyme INQ56_01990 PF00550 Phosphopantetheine attachment site INQ56_01990 PF00668 Condensation domain INQ56_01990 PF00501 AMP-binding enzyme INQ56_01990 PF13193 AMP-binding enzyme C-terminal domain INQ56_01995 PF00668 Condensation domain INQ56_01995 PF00975 Thioesterase domain INQ56_01995 PF00550 Phosphopantetheine attachment site INQ56_01995 PF00501 AMP-binding enzyme INQ56_01995 PF13193 AMP-binding enzyme C-terminal domain INQ56_02000 PF00550 Phosphopantetheine attachment site INQ56_02000 PF00668 Condensation domain INQ56_02000 PF13193 AMP-binding enzyme C-terminal domain INQ56_02000 PF00501 AMP-binding enzyme INQ56_02005 PF00550 Phosphopantetheine attachment site INQ56_02005 PF13193 AMP-binding enzyme C-terminal domain INQ56_02005 PF00501 AMP-binding enzyme INQ56_02005 PF00668 Condensation domain INQ56_02010 PF00975 Thioesterase domain INQ56_02015 PF00892 EamA-like transporter family INQ56_02020 PF00155 Aminotransferase class I and II INQ56_02020 PF00392 Bacterial regulatory proteins, gntR family INQ56_02025 PF01648 4'-phosphopantetheinyl transferase superfamily INQ56_02045 PF04203 Sortase domain INQ56_02050 PF18277 AbrB C-terminal domain INQ56_02050 PF04014 Antidote-toxin recognition MazE, bacterial antitoxin INQ56_02055 PF00005 ABC transporter INQ56_02060 PF00528 Binding-protein-dependent transport system inner membrane component INQ56_02065 PF00497 Bacterial extracellular solute-binding proteins, family 3 INQ56_02070 PF01738 Dienelactone hydrolase family INQ56_02075 PF00324 Amino acid permease INQ56_02080 PF00854 POT family INQ56_02085 PF12708 Pectate lyase superfamily protein INQ56_02085 PF13229 Right handed beta helix region INQ56_02090 PF00296 Luciferase-like monooxygenase INQ56_02095 PF00583 Acetyltransferase (GNAT) family INQ56_02100 PF00497 Bacterial extracellular solute-binding proteins, family 3 INQ56_02105 PF00528 Binding-protein-dependent transport system inner membrane component INQ56_02110 PF00005 ABC transporter INQ56_02115 PF07687 Peptidase dimerisation domain INQ56_02115 PF01546 Peptidase family M20/M25/M40 INQ56_02120 PF03972 MmgE/PrpD family INQ56_02130 PF00072 Response regulator receiver domain INQ56_02130 PF00486 Transcriptional regulatory protein, C terminal INQ56_02135 PF00672 HAMP domain INQ56_02135 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase INQ56_02135 PF00512 His Kinase A (phospho-acceptor) domain INQ56_02140 PF01740 STAS domain INQ56_02140 PF14361 RsbT co-antagonist protein rsbRD N-terminal domain INQ56_02145 PF00696 Amino acid kinase family INQ56_02145 PF13840 ACT domain INQ56_02150 PF07690 Major Facilitator Superfamily INQ56_02155 PF00440 Bacterial regulatory proteins, tetR family INQ56_02165 PF01022 Bacterial regulatory protein, arsR family INQ56_02175 PF03466 LysR substrate binding domain INQ56_02175 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family INQ56_02180 PF00392 Bacterial regulatory proteins, gntR family INQ56_02180 PF00155 Aminotransferase class I and II INQ56_02185 PF00202 Aminotransferase class-III INQ56_02190 PF13520 Amino acid permease INQ56_02195 PF00171 Aldehyde dehydrogenase family INQ56_02200 PF02525 Flavodoxin-like fold INQ56_02205 PF07987 Domain of unkown function (DUF1775) INQ56_02210 PF04234 CopC domain INQ56_02210 PF05425 Copper resistance protein D INQ56_02210 PF13115 YtkA-like INQ56_02215 PF02378 Phosphotransferase system, EIIC INQ56_02215 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit INQ56_02220 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 INQ56_02225 PF08125 Mannitol dehydrogenase C-terminal domain INQ56_02225 PF01232 Mannitol dehydrogenase Rossmann domain INQ56_02230 PF02743 Cache domain INQ56_02230 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain INQ56_02230 PF00672 HAMP domain INQ56_02265 PF12681 Glyoxalase-like domain INQ56_02270 PF05901 Excalibur calcium-binding domain INQ56_02295 PF18801 response regulator aspartate phosphatase H, N terminal INQ56_02300 PF03746 LamB/YcsF family INQ56_02305 PF01566 Natural resistance-associated macrophage protein INQ56_02310 PF07286 Protein of unknown function (DUF1445) INQ56_02315 PF02682 Carboxyltransferase domain, subdomain C and D INQ56_02320 PF02626 Carboxyltransferase domain, subdomain A and B INQ56_02325 PF09339 IclR helix-turn-helix domain INQ56_02325 PF01614 Bacterial transcriptional regulator INQ56_02330 PF02525 Flavodoxin-like fold INQ56_02335 PF13472 GDSL-like Lipase/Acylhydrolase family INQ56_02345 PF08279 HTH domain INQ56_02345 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 INQ56_02345 PF00874 PRD domain INQ56_02345 PF05043 Mga helix-turn-helix domain INQ56_02345 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit INQ56_02350 PF13649 Methyltransferase domain INQ56_02360 PF16242 Pyridoxamine 5'-phosphate oxidase like INQ56_02380 PF12823 Domain of unknown function (DUF3817) INQ56_02385 PF07729 FCD domain INQ56_02385 PF00392 Bacterial regulatory proteins, gntR family INQ56_02395 PF00892 EamA-like transporter family INQ56_02400 PF00180 Isocitrate/isopropylmalate dehydrogenase INQ56_02405 PF01131 DNA topoisomerase INQ56_02405 PF01751 Toprim domain INQ56_02415 PF00990 Diguanylate cyclase, GGDEF domain INQ56_02420 PF10096 Uncharacterized protein conserved in bacteria (DUF2334) INQ56_02430 PF03170 Bacterial cellulose synthase subunit INQ56_02435 PF13520 Amino acid permease INQ56_02440 PF00205 Thiamine pyrophosphate enzyme, central domain INQ56_02440 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain INQ56_02440 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain INQ56_02445 PF14431 YwqJ-like deaminase INQ56_02445 PF04740 LXG domain of WXG superfamily INQ56_02445 PF14449 Pre-toxin TG INQ56_02455 PF04493 Endonuclease V INQ56_02470 PF13302 Acetyltransferase (GNAT) domain INQ56_02475 PF01566 Natural resistance-associated macrophage protein INQ56_02480 PF04226 Transglycosylase associated protein INQ56_02485 PF12787 EcsC protein family INQ56_02490 PF03480 Bacterial extracellular solute-binding protein, family 7 INQ56_02495 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase INQ56_02495 PF17203 Single cache domain 3 INQ56_02495 PF14689 Sensor_kinase_SpoOB-type, alpha-helical domain INQ56_02500 PF00072 Response regulator receiver domain INQ56_02500 PF08279 HTH domain INQ56_02505 PF00375 Sodium:dicarboxylate symporter family INQ56_02510 PF01594 AI-2E family transporter INQ56_02515 PF00375 Sodium:dicarboxylate symporter family INQ56_02520 PF00005 ABC transporter INQ56_02535 PF13040 Fur-regulated basic protein B INQ56_02540 PF00085 Thioredoxin INQ56_02545 PF01820 D-ala D-ala ligase N-terminus INQ56_02545 PF07478 D-ala D-ala ligase C-terminus INQ56_02550 PF08245 Mur ligase middle domain INQ56_02550 PF02875 Mur ligase family, glutamate ligase domain INQ56_02550 PF01225 Mur ligase family, catalytic domain INQ56_02555 PF12146 Serine aminopeptidase, S33 INQ56_02565 PF00271 Helicase conserved C-terminal domain INQ56_02565 PF00270 DEAD/DEAH box helicase INQ56_02570 PF03703 Bacterial PH domain INQ56_02575 PF03703 Bacterial PH domain INQ56_02580 PF01694 Rhomboid family INQ56_02585 PF01648 4'-phosphopantetheinyl transferase superfamily INQ56_02595 PF00842 Alanine racemase, C-terminal domain INQ56_02595 PF01168 Alanine racemase, N-terminal domain INQ56_02600 PF01402 Ribbon-helix-helix protein, copG family INQ56_02605 PF02452 PemK-like, MazF-like toxin of type II toxin-antitoxin system INQ56_02610 PF08678 Rsbr N terminal INQ56_02610 PF01740 STAS domain INQ56_02615 PF01740 STAS domain INQ56_02620 PF13581 Histidine kinase-like ATPase domain INQ56_02625 PF08673 Phosphoserine phosphatase RsbU, N-terminal domain INQ56_02625 PF07228 Stage II sporulation protein E (SpoIIE) INQ56_02630 PF01740 STAS domain INQ56_02635 PF13581 Histidine kinase-like ATPase domain INQ56_02640 PF04539 Sigma-70 region 3 INQ56_02640 PF04542 Sigma-70 region 2 INQ56_02640 PF04545 Sigma-70, region 4 INQ56_02645 PF07228 Stage II sporulation protein E (SpoIIE) INQ56_02650 PF00575 S1 RNA binding domain INQ56_02650 PF17674 HHH domain INQ56_02650 PF09371 Tex-like protein N-terminal domain INQ56_02650 PF16921 Tex protein YqgF-like domain INQ56_02660 PF17283 SprT-like zinc ribbon domain INQ56_02660 PF10263 SprT-like family INQ56_02665 PF00676 Dehydrogenase E1 component INQ56_02670 PF02780 Transketolase, C-terminal domain INQ56_02670 PF02779 Transketolase, pyrimidine binding domain INQ56_02675 PF00364 Biotin-requiring enzyme INQ56_02675 PF02817 e3 binding domain INQ56_02675 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) INQ56_02680 PF07992 Pyridine nucleotide-disulphide oxidoreductase INQ56_02680 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain INQ56_02685 PF01590 GAF domain INQ56_02685 PF02954 Bacterial regulatory protein, Fis family INQ56_02685 PF00158 Sigma-54 interaction domain INQ56_02725 PF00440 Bacterial regulatory proteins, tetR family INQ56_02730 PF00364 Biotin-requiring enzyme INQ56_02730 PF00561 alpha/beta hydrolase fold INQ56_02735 PF00724 NADH:flavin oxidoreductase / NADH oxidase family INQ56_02740 PF00106 short chain dehydrogenase INQ56_02745 PF00106 short chain dehydrogenase INQ56_02745 PF00561 alpha/beta hydrolase fold INQ56_02750 PF08240 Alcohol dehydrogenase GroES-like domain INQ56_02750 PF00107 Zinc-binding dehydrogenase INQ56_02755 PF00313 'Cold-shock' DNA-binding domain INQ56_02760 PF02559 CarD-like/TRCF domain INQ56_02765 PF00107 Zinc-binding dehydrogenase INQ56_02765 PF08240 Alcohol dehydrogenase GroES-like domain INQ56_02770 PF13411 MerR HTH family regulatory protein INQ56_02775 PF00722 Glycosyl hydrolases family 16 INQ56_02780 PF00440 Bacterial regulatory proteins, tetR family INQ56_02785 PF07690 Major Facilitator Superfamily INQ56_02790 PF07859 alpha/beta hydrolase fold INQ56_02800 PF00106 short chain dehydrogenase INQ56_02815 PF00710 Asparaginase, N-terminal INQ56_02815 PF17763 Glutaminase/Asparaginase C-terminal domain INQ56_02820 PF12697 Alpha/beta hydrolase family INQ56_02830 PF16925 Tetracyclin repressor-like, C-terminal domain INQ56_02830 PF00440 Bacterial regulatory proteins, tetR family INQ56_02835 PF07690 Major Facilitator Superfamily INQ56_02840 PF01757 Acyltransferase family INQ56_02845 PF03176 MMPL family INQ56_02850 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase INQ56_02850 PF07730 Histidine kinase INQ56_02855 PF00196 Bacterial regulatory proteins, luxR family INQ56_02855 PF00072 Response regulator receiver domain INQ56_02885 PF00583 Acetyltransferase (GNAT) family INQ56_02890 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily INQ56_02900 PF00440 Bacterial regulatory proteins, tetR family INQ56_02905 PF01872 RibD C-terminal domain INQ56_02910 PF01047 MarR family INQ56_02915 PF00881 Nitroreductase family INQ56_02930 PF07883 Cupin domain INQ56_02930 PF01381 Helix-turn-helix INQ56_02935 PF01810 LysE type translocator INQ56_02940 PF00583 Acetyltransferase (GNAT) family INQ56_02945 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family INQ56_02945 PF03466 LysR substrate binding domain INQ56_02950 PF00248 Aldo/keto reductase family INQ56_02960 PF01596 O-methyltransferase INQ56_02970 PF03591 AzlC protein INQ56_02975 PF00892 EamA-like transporter family INQ56_02985 PF00375 Sodium:dicarboxylate symporter family INQ56_03025 PF02769 AIR synthase related protein, C-terminal domain INQ56_03025 PF00586 AIR synthase related protein, N-terminal domain INQ56_03030 PF02367 Threonylcarbamoyl adenosine biosynthesis protein TsaE INQ56_03035 PF00814 Glycoprotease family INQ56_03040 PF00583 Acetyltransferase (GNAT) family INQ56_03045 PF00814 Glycoprotease family INQ56_03050 PF16326 ABC transporter C-terminal domain INQ56_03050 PF00005 ABC transporter INQ56_03050 PF12848 ABC transporter INQ56_03055 PF01967 MoaC family INQ56_03060 PF02629 CoA binding domain INQ56_03060 PF06971 Putative DNA-binding protein N-terminus INQ56_03065 PF02416 mttA/Hcf106 family INQ56_03070 PF00902 Sec-independent protein translocase protein (TatC) INQ56_03080 PF14146 Domain of unknown function (DUF4305) INQ56_03085 PF02517 CPBP intramembrane metalloprotease INQ56_03090 PF00166 Chaperonin 10 Kd subunit INQ56_03095 PF00118 TCP-1/cpn60 chaperonin family INQ56_03100 PF01047 MarR family INQ56_03105 PF00583 Acetyltransferase (GNAT) family INQ56_03110 PF04299 Putative FMN-binding domain INQ56_03140 PF03330 Lytic transglycolase INQ56_03145 PF07676 WD40-like Beta Propeller Repeat INQ56_03155 PF07732 Multicopper oxidase INQ56_03155 PF00394 Multicopper oxidase INQ56_03155 PF07731 Multicopper oxidase INQ56_03160 PF00324 Amino acid permease INQ56_03165 PF01545 Cation efflux family INQ56_03165 PF16916 Dimerisation domain of Zinc Transporter INQ56_03170 PF07726 ATPase family associated with various cellular activities (AAA) INQ56_03170 PF17863 AAA lid domain INQ56_03175 PF01882 Protein of unknown function DUF58 INQ56_03180 PF11992 Domain of unknown function (DUF3488) INQ56_03180 PF01841 Transglutaminase-like superfamily INQ56_03180 PF13559 Domain of unknown function (DUF4129) INQ56_03185 PF00117 Glutamine amidotransferase class-I INQ56_03185 PF00958 GMP synthase C terminal domain INQ56_03185 PF02540 NAD synthase INQ56_03190 PF04073 Aminoacyl-tRNA editing domain INQ56_03195 PF12833 Helix-turn-helix domain INQ56_03200 PF08502 LeuA allosteric (dimerisation) domain INQ56_03200 PF00682 HMGL-like INQ56_03205 PF12833 Helix-turn-helix domain INQ56_03235 PF13302 Acetyltransferase (GNAT) domain INQ56_03250 PF04542 Sigma-70 region 2 INQ56_03250 PF08281 Sigma-70, region 4 INQ56_03260 PF07690 Major Facilitator Superfamily INQ56_03265 PF03466 LysR substrate binding domain INQ56_03265 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family INQ56_03270 PF00860 Permease family INQ56_03280 PF10055 Uncharacterized small protein (DUF2292) INQ56_03290 PF10035 Uncharacterized protein conserved in bacteria (DUF2179) INQ56_03295 PF14044 NETI protein INQ56_03300 PF00731 AIR carboxylase INQ56_03305 PF17769 Phosphoribosylaminoimidazole carboxylase C-terminal domain INQ56_03305 PF02222 ATP-grasp domain INQ56_03310 PF10397 Adenylosuccinate lyase C-terminus INQ56_03310 PF00206 Lyase INQ56_03315 PF01259 SAICAR synthetase INQ56_03320 PF02700 Phosphoribosylformylglycinamidine (FGAM) synthase INQ56_03330 PF18072 Formylglycinamide ribonucleotide amidotransferase linker domain INQ56_03330 PF02769 AIR synthase related protein, C-terminal domain INQ56_03330 PF00586 AIR synthase related protein, N-terminal domain INQ56_03335 PF00156 Phosphoribosyl transferase domain INQ56_03340 PF00586 AIR synthase related protein, N-terminal domain INQ56_03340 PF02769 AIR synthase related protein, C-terminal domain INQ56_03345 PF00551 Formyl transferase INQ56_03350 PF02142 MGS-like domain INQ56_03350 PF01808 AICARFT/IMPCHase bienzyme INQ56_03355 PF01071 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain INQ56_03355 PF02843 Phosphoribosylglycinamide synthetase, C domain INQ56_03355 PF02844 Phosphoribosylglycinamide synthetase, N domain INQ56_03375 PF00202 Aminotransferase class-III INQ56_03380 PF01144 Coenzyme A transferase INQ56_03385 PF01144 Coenzyme A transferase INQ56_03390 PF07687 Peptidase dimerisation domain INQ56_03390 PF01546 Peptidase family M20/M25/M40 INQ56_03395 PF11127 Protein of unknown function (DUF2892) INQ56_03400 PF13382 Adenine deaminase C-terminal domain INQ56_03400 PF01979 Amidohydrolase family INQ56_03405 PF01371 Trp repressor protein INQ56_03415 PF01645 Conserved region in glutamate synthase INQ56_03430 PF01884 PcrB family INQ56_03435 PF13361 UvrD-like helicase C-terminal domain INQ56_03435 PF00580 UvrD/REP helicase N-terminal domain INQ56_03440 PF00533 BRCA1 C Terminus (BRCT) domain INQ56_03440 PF01653 NAD-dependent DNA ligase adenylation domain INQ56_03440 PF03119 NAD-dependent DNA ligase C4 zinc finger domain INQ56_03440 PF12826 Helix-hairpin-helix motif INQ56_03440 PF03120 NAD-dependent DNA ligase OB-fold domain INQ56_03445 PF07537 CamS sex pheromone cAM373 precursor INQ56_03450 PF01636 Phosphotransferase enzyme family INQ56_03455 PF02308 MgtC family INQ56_03460 PF00474 Sodium:solute symporter family INQ56_03465 PF02686 Glu-tRNAGln amidotransferase C subunit INQ56_03470 PF01425 Amidase INQ56_03475 PF02934 GatB/GatE catalytic domain INQ56_03475 PF02637 GatB domain INQ56_03480 PF00440 Bacterial regulatory proteins, tetR family INQ56_03485 PF00873 AcrB/AcrD/AcrF family INQ56_03490 PF01156 Inosine-uridine preferring nucleoside hydrolase INQ56_03495 PF00781 Diacylglycerol kinase catalytic domain INQ56_03500 PF05958 tRNA (Uracil-5-)-methyltransferase INQ56_03500 PF01938 TRAM domain INQ56_03520 PF01207 Dihydrouridine synthase (Dus) INQ56_03535 PF02082 Transcriptional regulator INQ56_03540 PF07992 Pyridine nucleotide-disulphide oxidoreductase INQ56_03550 PF13021 Domain of unknown function (DUF3885) INQ56_03555 PF11975 Family 4 glycosyl hydrolase C-terminal domain INQ56_03555 PF02056 Family 4 glycosyl hydrolase INQ56_03560 PF01380 SIS domain INQ56_03560 PF01418 Helix-turn-helix domain, rpiR family INQ56_03565 PF07690 Major Facilitator Superfamily INQ56_03575 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family INQ56_03575 PF03466 LysR substrate binding domain INQ56_03585 PF13037 Domain of unknown function (DUF3898) INQ56_03585 PF13039 Protein of unknown function (DUF3900) INQ56_03595 PF00483 Nucleotidyl transferase INQ56_03600 PF16363 GDP-mannose 4,6 dehydratase INQ56_03605 PF03407 Nucleotide-diphospho-sugar transferase INQ56_03610 PF00535 Glycosyl transferase family 2 INQ56_03615 PF03407 Nucleotide-diphospho-sugar transferase INQ56_03620 PF07690 Major Facilitator Superfamily INQ56_03625 PF00905 Penicillin binding protein transpeptidase domain INQ56_03625 PF05223 NTF2-like N-terminal transpeptidase domain INQ56_03625 PF03717 Penicillin-binding Protein dimerisation domain INQ56_03630 PF00939 Sodium:sulfate symporter transmembrane region INQ56_03645 PF00011 Hsp20/alpha crystallin family INQ56_03660 PF13520 Amino acid permease INQ56_03665 PF13181 Tetratricopeptide repeat INQ56_03665 PF00535 Glycosyl transferase family 2 INQ56_03670 PF00005 ABC transporter INQ56_03670 PF12848 ABC transporter INQ56_03670 PF16326 ABC transporter C-terminal domain INQ56_03675 PF02649 Type I GTP cyclohydrolase folE2 INQ56_03680 PF13411 MerR HTH family regulatory protein INQ56_03685 PF07690 Major Facilitator Superfamily INQ56_03690 PF12848 ABC transporter INQ56_03690 PF00005 ABC transporter INQ56_03695 PF00271 Helicase conserved C-terminal domain INQ56_03695 PF00270 DEAD/DEAH box helicase INQ56_03700 PF00107 Zinc-binding dehydrogenase INQ56_03700 PF16884 N-terminal domain of oxidoreductase INQ56_03705 PF11486 Protein of unknown function (DUF3212) INQ56_03710 PF11181 Heat induced stress protein YflT INQ56_03720 PF00925 GTP cyclohydrolase II INQ56_03720 PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase INQ56_03735 PF01872 RibD C-terminal domain INQ56_03735 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region INQ56_03745 PF14689 Sensor_kinase_SpoOB-type, alpha-helical domain INQ56_03745 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase INQ56_03750 PF08279 HTH domain INQ56_03750 PF12431 Transcriptional regulator INQ56_03750 PF00072 Response regulator receiver domain INQ56_03755 PF03401 Tripartite tricarboxylate transporter family receptor INQ56_03760 PF03600 Citrate transporter INQ56_03770 PF05870 Phenolic acid decarboxylase (PAD) INQ56_03775 PF10400 Virulence activator alpha C-term INQ56_03775 PF03551 Transcriptional regulator PadR-like family INQ56_03780 PF02898 Nitric oxide synthase, oxygenase domain INQ56_03790 PF00708 Acylphosphatase INQ56_03795 PF03473 MOSC domain INQ56_03795 PF03475 3-alpha domain INQ56_03800 PF11121 Protein of unknown function (DUF2639) INQ56_03810 PF00557 Metallopeptidase family M24 INQ56_03815 PF00367 phosphotransferase system, EIIB INQ56_03815 PF02378 Phosphotransferase system, EIIC INQ56_03820 PF05675 Protein of unknown function (DUF817) INQ56_03830 PF14172 Domain of unknown function (DUF4309) INQ56_03835 PF00884 Sulfatase INQ56_03840 PF00282 Pyridoxal-dependent decarboxylase conserved domain INQ56_03845 PF02743 Cache domain INQ56_03845 PF00672 HAMP domain INQ56_03845 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain INQ56_03850 PF09350 Domain of unknown function (DUF1992) INQ56_03855 PF02378 Phosphotransferase system, EIIC INQ56_03855 PF00367 phosphotransferase system, EIIB INQ56_03860 PF00128 Alpha amylase, catalytic domain INQ56_03860 PF16657 Maltogenic Amylase, C-terminal domain INQ56_03865 PF07702 UTRA domain INQ56_03865 PF00392 Bacterial regulatory proteins, gntR family INQ56_03875 PF00149 Calcineurin-like phosphoesterase INQ56_03875 PF02872 5'-nucleotidase, C-terminal domain INQ56_03880 PF01965 DJ-1/PfpI family INQ56_03885 PF06569 Protein of unknown function (DUF1128) INQ56_03890 PF01235 Sodium:alanine symporter family INQ56_03895 PF01451 Low molecular weight phosphotyrosine protein phosphatase INQ56_03905 PF03631 Virulence factor BrkB INQ56_03915 PF07690 Major Facilitator Superfamily INQ56_03925 PF01699 Sodium/calcium exchanger protein INQ56_03930 PF14167 YfkD-like protein INQ56_03935 PF01709 Transcriptional regulator INQ56_03945 PF00924 Mechanosensitive ion channel INQ56_03950 PF08756 YfkB-like domain INQ56_03950 PF04055 Radical SAM superfamily INQ56_03960 PF01522 Polysaccharide deacetylase INQ56_03965 PF10898 Protein of unknown function (DUF2716) INQ56_03970 PF01544 CorA-like Mg2+ transporter protein INQ56_03980 PF00730 HhH-GPD superfamily base excision DNA repair protein INQ56_03985 PF05958 tRNA (Uracil-5-)-methyltransferase INQ56_03985 PF01938 TRAM domain INQ56_04030 PF13411 MerR HTH family regulatory protein INQ56_04030 PF07739 TipAS antibiotic-recognition domain INQ56_04035 PF07690 Major Facilitator Superfamily INQ56_04085 PF00893 Small Multidrug Resistance protein INQ56_04090 PF00893 Small Multidrug Resistance protein INQ56_04095 PF00440 Bacterial regulatory proteins, tetR family INQ56_04095 PF17934 Tetracyclin repressor-like, C-terminal domain INQ56_04110 PF00657 GDSL-like Lipase/Acylhydrolase INQ56_04115 PF07992 Pyridine nucleotide-disulphide oxidoreductase INQ56_04120 PF12833 Helix-turn-helix domain INQ56_04120 PF02805 Metal binding domain of Ada INQ56_04125 PF01497 Periplasmic binding protein INQ56_04130 PF00005 ABC transporter INQ56_04130 PF00664 ABC transporter transmembrane region INQ56_04135 PF02694 Uncharacterised BCR, YnfA/UPF0060 family INQ56_04140 PF04545 Sigma-70, region 4 INQ56_04140 PF04542 Sigma-70 region 2 INQ56_04155 PF00107 Zinc-binding dehydrogenase INQ56_04155 PF08240 Alcohol dehydrogenase GroES-like domain INQ56_04160 PF12867 DinB superfamily INQ56_04170 PF01047 MarR family INQ56_04175 PF09924 Uncharacterised conserved protein (DUF2156) INQ56_04175 PF03706 Lysylphosphatidylglycerol synthase TM region INQ56_04190 PF18801 response regulator aspartate phosphatase H, N terminal INQ56_04195 PF00881 Nitroreductase family INQ56_04215 PF01370 NAD dependent epimerase/dehydratase family INQ56_04215 PF08338 Domain of unknown function (DUF1731) INQ56_04220 PF02631 RecX family INQ56_04225 PF08838 Protein of unknown function (DUF1811) INQ56_04235 PF08176 Small acid-soluble spore protein K family INQ56_04240 PF14043 WVELL protein INQ56_04245 PF00535 Glycosyl transferase family 2 INQ56_04250 PF09586 Bacterial membrane protein YfhO INQ56_04255 PF01494 FAD binding domain INQ56_04270 PF00190 Cupin INQ56_04275 PF12841 YvrJ protein family INQ56_04280 PF04545 Sigma-70, region 4 INQ56_04290 PF04307 LexA-binding, inner membrane-associated putative hydrolase INQ56_04295 PF14815 NUDIX domain INQ56_04295 PF00730 HhH-GPD superfamily base excision DNA repair protein INQ56_04310 PF04259 Small, acid-soluble spore protein, gamma-type INQ56_04320 PF04167 Protein of unknown function (DUF402) INQ56_04325 PF00664 ABC transporter transmembrane region INQ56_04325 PF00005 ABC transporter INQ56_04330 PF00005 ABC transporter INQ56_04330 PF08352 Oligopeptide/dipeptide transporter, C-terminal region INQ56_04335 PF00005 ABC transporter INQ56_04335 PF08352 Oligopeptide/dipeptide transporter, C-terminal region INQ56_04340 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle INQ56_04345 PF00528 Binding-protein-dependent transport system inner membrane component INQ56_04350 PF00528 Binding-protein-dependent transport system inner membrane component INQ56_04350 PF12911 N-terminal TM domain of oligopeptide transport permease C INQ56_04355 PF06081 Aromatic acid exporter family member 1 INQ56_04360 PF00202 Aminotransferase class-III INQ56_04365 PF00578 AhpC/TSA family INQ56_04370 PF01475 Ferric uptake regulator family INQ56_04375 PF11023 Zinc-ribbon containing domain INQ56_04380 PF14540 Nucleotidyltransferase-like INQ56_04380 PF18576 Helix-turn-helix domain INQ56_04530 PF00884 Sulfatase INQ56_04535 PF10502 Signal peptidase, peptidase S26 INQ56_04545 PF01053 Cys/Met metabolism PLP-dependent enzyme INQ56_04550 PF13040 Fur-regulated basic protein B INQ56_04555 PF00005 ABC transporter INQ56_04560 PF09084 NMT1/THI5 like INQ56_04565 PF00528 Binding-protein-dependent transport system inner membrane component INQ56_04570 PF00296 Luciferase-like monooxygenase INQ56_04580 PF00005 ABC transporter INQ56_04615 PF08331 Domain of unknown function (DUF1730) INQ56_04620 PF12671 Putative amidase domain INQ56_04625 PF00588 SpoU rRNA Methylase family INQ56_04630 PF06798 PrkA serine protein kinase C-terminal domain INQ56_04630 PF08298 PrkA AAA domain INQ56_04635 PF04285 Protein of unknown function (DUF444) INQ56_04645 PF07690 Major Facilitator Superfamily INQ56_04650 PF03358 NADPH-dependent FMN reductase INQ56_04660 PF00313 'Cold-shock' DNA-binding domain INQ56_04665 PF00990 Diguanylate cyclase, GGDEF domain INQ56_04665 PF07694 5TMR of 5TMR-LYT INQ56_04680 PF09580 Sporulation lipoprotein YhcN/YlaJ (Spore_YhcN_YlaJ) INQ56_04690 PF07875 Coat F domain INQ56_04695 PF00989 PAS fold INQ56_04695 PF13188 PAS domain INQ56_04695 PF00512 His Kinase A (phospho-acceptor) domain INQ56_04695 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase INQ56_04695 PF13426 PAS domain INQ56_04700 PF00149 Calcineurin-like phosphoesterase INQ56_04700 PF00565 Staphylococcal nuclease homologue INQ56_04700 PF00746 LPXTG cell wall anchor motif INQ56_04700 PF02872 5'-nucleotidase, C-terminal domain INQ56_04705 PF04203 Sortase domain INQ56_04710 PF00849 RNA pseudouridylate synthase INQ56_04710 PF01479 S4 domain INQ56_04720 PF13419 Haloacid dehalogenase-like hydrolase INQ56_04725 PF00795 Carbon-nitrogen hydrolase INQ56_04725 PF00583 Acetyltransferase (GNAT) family INQ56_04745 PF13556 PucR C-terminal helix-turn-helix domain INQ56_04745 PF17853 GGDEF-like domain INQ56_04745 PF05651 Putative sugar diacid recognition INQ56_04750 PF00202 Aminotransferase class-III INQ56_04755 PF04309 Glycerol-3-phosphate responsive antiterminator INQ56_04760 PF00230 Major intrinsic protein INQ56_04765 PF00370 FGGY family of carbohydrate kinases, N-terminal domain INQ56_04765 PF02782 FGGY family of carbohydrate kinases, C-terminal domain INQ56_04770 PF16901 C-terminal domain of alpha-glycerophosphate oxidase INQ56_04770 PF01266 FAD dependent oxidoreductase INQ56_04775 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III INQ56_04775 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain INQ56_04775 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II INQ56_04775 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I INQ56_04780 PF13185 GAF domain INQ56_04780 PF07730 Histidine kinase INQ56_04785 PF00196 Bacterial regulatory proteins, luxR family INQ56_04785 PF00072 Response regulator receiver domain INQ56_04790 PF14148 YhdB-like protein INQ56_04795 PF13028 Protein of unknown function (DUF3889) INQ56_04800 PF06628 Catalase-related immune-responsive INQ56_04800 PF00199 Catalase INQ56_04805 PF02082 Transcriptional regulator INQ56_04810 PF00175 Oxidoreductase NAD-binding domain INQ56_04810 PF00042 Globin INQ56_04810 PF00970 Oxidoreductase FAD-binding domain INQ56_04815 PF04293 SpoVR like protein INQ56_04825 PF00245 Alkaline phosphatase INQ56_04830 PF00877 NlpC/P60 family INQ56_04830 PF01476 LysM domain INQ56_04835 PF17453 Sigma-M inhibitor INQ56_04840 PF13800 Sigma factor regulator N-terminal INQ56_04840 PF13791 Sigma factor regulator C-terminal INQ56_04845 PF04542 Sigma-70 region 2 INQ56_04845 PF08281 Sigma-70, region 4 INQ56_04850 PF01553 Acyltransferase INQ56_04855 PF03471 Transporter associated domain INQ56_04855 PF01595 Cyclin M transmembrane N-terminal domain INQ56_04855 PF00571 CBS domain INQ56_04860 PF13411 MerR HTH family regulatory protein INQ56_04865 PF00571 CBS domain INQ56_04865 PF03471 Transporter associated domain INQ56_04865 PF01595 Cyclin M transmembrane N-terminal domain INQ56_04875 PF02537 CrcB-like protein, Camphor Resistance (CrcB) INQ56_04880 PF02537 CrcB-like protein, Camphor Resistance (CrcB) INQ56_04885 PF03009 Glycerophosphoryl diester phosphodiesterase family INQ56_04890 PF17444 Uncharacterized YhdX-like INQ56_04895 PF00924 Mechanosensitive ion channel INQ56_04900 PF02146 Sir2 family INQ56_04905 PF01522 Polysaccharide deacetylase INQ56_04910 PF01063 Amino-transferase class IV INQ56_04915 PF00582 Universal stress protein family INQ56_04920 PF00005 ABC transporter INQ56_04920 PF00664 ABC transporter transmembrane region INQ56_04925 PF00005 ABC transporter INQ56_04925 PF00664 ABC transporter transmembrane region INQ56_04930 PF13460 NAD(P)H-binding INQ56_04935 PF00269 Small, acid-soluble spore proteins, alpha/beta type INQ56_04940 PF00005 ABC transporter INQ56_04940 PF17912 MalK OB fold domain INQ56_04940 PF03459 TOBE domain INQ56_04945 PF13556 PucR C-terminal helix-turn-helix domain INQ56_04950 PF17277 Family of unknown function (DUF5342) INQ56_04955 PF14398 YheC/D like ATP-grasp INQ56_04965 PF04286 Protein of unknown function (DUF445) INQ56_04970 PF06133 Control of competence regulator ComK, YlbF/YmcA INQ56_04980 PF04055 Radical SAM superfamily INQ56_04985 PF13434 L-lysine 6-monooxygenase (NADPH-requiring) INQ56_04990 PF00999 Sodium/hydrogen exchanger family INQ56_04995 PF02080 TrkA-C domain INQ56_05005 PF00378 Enoyl-CoA hydratase/isomerase INQ56_05010 PF14120 YhzD-like protein INQ56_05015 PF00149 Calcineurin-like phosphoesterase INQ56_05020 PF13514 AAA domain INQ56_05025 PF01966 HD domain INQ56_05030 PF14147 Sporulation protein YhaL INQ56_05040 PF09680 Family of unknown function INQ56_05045 PF09680 Family of unknown function INQ56_05050 PF11667 Putative zincin peptidase INQ56_05055 PF08963 Protein of unknown function (DUF1878) INQ56_05060 PF01047 MarR family INQ56_05065 PF12732 YtxH-like protein INQ56_05075 PF17099 Tryptophan transporter TrpP INQ56_05080 PF00266 Aminotransferase class-V INQ56_05085 PF01230 HIT domain INQ56_05090 PF00005 ABC transporter INQ56_05095 PF05975 Bacterial ABC transporter protein EcsB INQ56_05100 PF12787 EcsC protein family INQ56_05105 PF01546 Peptidase family M20/M25/M40 INQ56_05105 PF07687 Peptidase dimerisation domain INQ56_05115 PF03992 Antibiotic biosynthesis monooxygenase INQ56_05120 PF00905 Penicillin binding protein transpeptidase domain INQ56_05120 PF00912 Transglycosylase INQ56_05125 PF01208 Uroporphyrinogen decarboxylase (URO-D) INQ56_05130 PF00762 Ferrochelatase INQ56_05135 PF01593 Flavin containing amine oxidoreductase INQ56_05140 PF17932 Tetracyclin repressor-like, C-terminal domain INQ56_05140 PF00440 Bacterial regulatory proteins, tetR family INQ56_05150 PF05343 M42 glutamyl aminopeptidase INQ56_05155 PF00375 Sodium:dicarboxylate symporter family INQ56_05160 PF14149 YhfH-like protein INQ56_05165 PF12706 Beta-lactamase superfamily domain INQ56_05170 PF03099 Biotin/lipoate A/B protein ligase family INQ56_05170 PF10437 Bacterial lipoate protein ligase C-terminus INQ56_05175 PF13193 AMP-binding enzyme C-terminal domain INQ56_05175 PF00501 AMP-binding enzyme INQ56_05185 PF01435 Peptidase family M48 INQ56_05185 PF16491 CAAX prenyl protease N-terminal, five membrane helices INQ56_05190 PF00082 Subtilase family INQ56_05190 PF05922 Peptidase inhibitor I9 INQ56_05195 PF00300 Histidine phosphatase superfamily (branch 1) INQ56_05200 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain INQ56_05205 PF00355 Rieske [2Fe-2S] domain INQ56_05205 PF01266 FAD dependent oxidoreductase INQ56_05215 PF08858 IDEAL domain INQ56_05220 PF06338 ComK protein INQ56_05225 PF14031 Putative serine dehydratase domain INQ56_05225 PF01168 Alanine racemase, N-terminal domain INQ56_05235 PF00392 Bacterial regulatory proteins, gntR family INQ56_05235 PF00155 Aminotransferase class I and II INQ56_05240 PF07690 Major Facilitator Superfamily INQ56_05245 PF01337 Barstar (barnase inhibitor) INQ56_05250 PF01032 FecCD transport family INQ56_05255 PF01032 FecCD transport family INQ56_05260 PF00005 ABC transporter INQ56_05265 PF01497 Periplasmic binding protein INQ56_05270 PF03816 Cell envelope-related transcriptional attenuator domain INQ56_05285 PF09335 SNARE associated Golgi protein INQ56_05290 PF10502 Signal peptidase, peptidase S26 INQ56_05295 PF05145 Transition state regulatory protein AbrB INQ56_05310 PF07681 DoxX INQ56_05315 PF02915 Rubrerythrin INQ56_05320 PF12705 PD-(D/E)XK nuclease superfamily INQ56_05325 PF13361 UvrD-like helicase C-terminal domain INQ56_05325 PF00580 UvrD/REP helicase N-terminal domain INQ56_05325 PF12705 PD-(D/E)XK nuclease superfamily INQ56_05330 PF00149 Calcineurin-like phosphoesterase INQ56_05330 PF12320 Type 5 capsule protein repressor C-terminal domain INQ56_05335 PF13476 AAA domain INQ56_05345 PF10676 Spore germination protein gerPA/gerPF INQ56_05350 PF10970 Spore germination protein GerPE INQ56_05360 PF10737 Spore germination protein GerPC INQ56_05365 PF10803 Spore germination GerPB INQ56_05370 PF10676 Spore germination protein gerPA/gerPF INQ56_05380 PF08757 CotH kinase protein INQ56_05390 PF01557 Fumarylacetoacetate (FAA) hydrolase family INQ56_05395 PF07457 Protein of unknown function (DUF1516) INQ56_05405 PF13537 Glutamine amidotransferase domain INQ56_05405 PF00733 Asparagine synthase INQ56_05410 PF01593 Flavin containing amine oxidoreductase INQ56_05415 PF01593 Flavin containing amine oxidoreductase INQ56_05425 PF01554 MatE INQ56_05430 PF12833 Helix-turn-helix domain INQ56_05430 PF02311 AraC-like ligand binding domain INQ56_05450 PF00202 Aminotransferase class-III INQ56_05455 PF00282 Pyridoxal-dependent decarboxylase conserved domain INQ56_05460 PF04183 IucA / IucC family INQ56_05460 PF06276 Ferric iron reductase FhuF-like transporter INQ56_05470 PF13434 L-lysine 6-monooxygenase (NADPH-requiring) INQ56_05475 PF04183 IucA / IucC family INQ56_05475 PF06276 Ferric iron reductase FhuF-like transporter INQ56_05490 PF02965 Vitamin B12 dependent methionine synthase, activation domain INQ56_05490 PF02574 Homocysteine S-methyltransferase INQ56_05490 PF02310 B12 binding domain INQ56_05490 PF00809 Pterin binding enzyme INQ56_05490 PF02607 B12 binding domain INQ56_05495 PF02574 Homocysteine S-methyltransferase INQ56_05495 PF02219 Methylenetetrahydrofolate reductase INQ56_05500 PF04461 Protein of unknown function (DUF520) INQ56_05505 PF17783 CvfB-like winged helix domain INQ56_05505 PF13509 S1 domain INQ56_05510 PF02608 ABC transporter substrate-binding protein PnrA-like INQ56_05515 PF00672 HAMP domain INQ56_05515 PF02743 Cache domain INQ56_05515 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain INQ56_05520 PF02645 Uncharacterised protein, DegV family COG1307 INQ56_05525 PF02588 Uncharacterised 5xTM membrane BCR, YitT family COG1284 INQ56_05525 PF10035 Uncharacterized protein conserved in bacteria (DUF2179) INQ56_05530 PF12690 Intracellular proteinase inhibitor INQ56_05535 PF12758 Protein of unknown function (DUF3813) INQ56_05550 PF00326 Prolyl oligopeptidase family INQ56_05555 PF01883 Iron-sulfur cluster assembly protein INQ56_05560 PF01565 FAD binding domain INQ56_05565 PF07690 Major Facilitator Superfamily INQ56_05570 PF02774 Semialdehyde dehydrogenase, dimerisation domain INQ56_05570 PF01118 Semialdehyde dehydrogenase, NAD binding domain INQ56_05575 PF01960 ArgJ family INQ56_05580 PF00696 Amino acid kinase family INQ56_05585 PF00202 Aminotransferase class-III INQ56_05590 PF00117 Glutamine amidotransferase class-I INQ56_05590 PF00988 Carbamoyl-phosphate synthase small chain, CPSase domain INQ56_05595 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain INQ56_05595 PF02787 Carbamoyl-phosphate synthetase large chain, oligomerisation domain INQ56_05600 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain INQ56_05600 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain INQ56_05605 PF14168 YjzC-like protein INQ56_05610 PF07690 Major Facilitator Superfamily INQ56_05615 PF11151 Protein of unknown function (DUF2929) INQ56_05630 PF02608 ABC transporter substrate-binding protein PnrA-like INQ56_05635 PF10815 ComZ INQ56_05645 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal INQ56_05645 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III INQ56_05650 PF02801 Beta-ketoacyl synthase, C-terminal domain INQ56_05650 PF00109 Beta-ketoacyl synthase, N-terminal domain INQ56_05655 PF10026 Predicted Zn-dependent protease (DUF2268) INQ56_05660 PF08352 Oligopeptide/dipeptide transporter, C-terminal region INQ56_05660 PF00005 ABC transporter INQ56_05665 PF08352 Oligopeptide/dipeptide transporter, C-terminal region INQ56_05665 PF00005 ABC transporter INQ56_05670 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle INQ56_05675 PF00528 Binding-protein-dependent transport system inner membrane component INQ56_05680 PF00528 Binding-protein-dependent transport system inner membrane component INQ56_05680 PF12911 N-terminal TM domain of oligopeptide transport permease C INQ56_05685 PF12227 Protein of unknown function (DUF3603) INQ56_05690 PF00579 tRNA synthetases class I (W and Y) INQ56_05695 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle INQ56_05700 PF00528 Binding-protein-dependent transport system inner membrane component INQ56_05705 PF12911 N-terminal TM domain of oligopeptide transport permease C INQ56_05705 PF00528 Binding-protein-dependent transport system inner membrane component INQ56_05710 PF08352 Oligopeptide/dipeptide transporter, C-terminal region INQ56_05710 PF00005 ABC transporter INQ56_05715 PF08352 Oligopeptide/dipeptide transporter, C-terminal region INQ56_05715 PF00005 ABC transporter INQ56_05735 PF13508 Acetyltransferase (GNAT) domain INQ56_05740 PF03960 ArsC family INQ56_05745 PF03741 Integral membrane protein TerC family INQ56_05750 PF05389 Negative regulator of genetic competence (MecA) INQ56_05755 PF13091 PLD-like domain INQ56_05755 PF13396 Phospholipase_D-nuclease N-terminal INQ56_05765 PF08439 Oligopeptidase F INQ56_05765 PF01432 Peptidase family M3 INQ56_05780 PF01152 Bacterial-like globin INQ56_05785 PF01464 Transglycosylase SLT domain INQ56_05790 PF01928 CYTH domain INQ56_05800 PF04607 Region found in RelA / SpoT proteins INQ56_05805 PF01513 ATP-NAD kinase INQ56_05810 PF00849 RNA pseudouridylate synthase INQ56_05815 PF00149 Calcineurin-like phosphoesterase INQ56_05820 PF00999 Sodium/hydrogen exchanger family INQ56_05820 PF02080 TrkA-C domain INQ56_05820 PF02254 TrkA-N domain INQ56_05825 PF03070 TENA/THI-4/PQQC family INQ56_05830 PF02581 Thiamine monophosphate synthase INQ56_05835 PF01266 FAD dependent oxidoreductase INQ56_05840 PF02597 ThiS family INQ56_05845 PF05690 Thiazole biosynthesis protein ThiG INQ56_05850 PF00899 ThiF family INQ56_05855 PF08543 Phosphomethylpyrimidine kinase INQ56_05865 PF14153 Spore coat protein CotO INQ56_05870 PF10612 Spore coat protein Z INQ56_05875 PF10612 Spore coat protein Z INQ56_05880 PF07552 Spore Coat Protein X and V domain INQ56_05890 PF07552 Spore Coat Protein X and V domain INQ56_05895 PF07098 Protein of unknown function (DUF1360) INQ56_05910 PF14069 Stage VI sporulation protein F INQ56_05915 PF00580 UvrD/REP helicase N-terminal domain INQ56_05915 PF13361 UvrD-like helicase C-terminal domain INQ56_05925 PF13673 Acetyltransferase (GNAT) domain INQ56_05935 PF00756 Putative esterase INQ56_05940 PF01053 Cys/Met metabolism PLP-dependent enzyme INQ56_05945 PF01053 Cys/Met metabolism PLP-dependent enzyme INQ56_05955 PF00589 Phage integrase family INQ56_05955 PF02899 Phage integrase, N-terminal SAM-like domain INQ56_06035 PF03255 Acetyl co-enzyme A carboxylase carboxyltransferase alpha subunit INQ56_06060 PF00302 Chloramphenicol acetyltransferase INQ56_06085 PF10852 Protein of unknown function (DUF2651) INQ56_06100 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family INQ56_06100 PF03466 LysR substrate binding domain INQ56_06105 PF01177 Asp/Glu/Hydantoin racemase INQ56_06120 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family INQ56_06120 PF03466 LysR substrate binding domain INQ56_06125 PF07690 Major Facilitator Superfamily INQ56_06145 PF00842 Alanine racemase, C-terminal domain INQ56_06145 PF01168 Alanine racemase, N-terminal domain INQ56_06150 PF00107 Zinc-binding dehydrogenase INQ56_06150 PF08240 Alcohol dehydrogenase GroES-like domain INQ56_06165 PF00700 Bacterial flagellin C-terminal helical region INQ56_06165 PF00669 Bacterial flagellin N-terminal helical region INQ56_06170 PF00669 Bacterial flagellin N-terminal helical region INQ56_06170 PF00700 Bacterial flagellin C-terminal helical region INQ56_06175 PF01494 FAD binding domain INQ56_06190 PF05908 Poly-gamma-glutamate hydrolase INQ56_06195 PF06114 IrrE N-terminal-like domain INQ56_06200 PF01476 LysM domain INQ56_06200 PF01471 Putative peptidoglycan binding domain INQ56_06200 PF01510 N-acetylmuramoyl-L-alanine amidase INQ56_06205 PF14185 Antitoxin SpoIISB, type II toxin-antitoxin system INQ56_06210 PF14171 Toxin SpoIISA, type II toxin-antitoxin system INQ56_06215 PF01384 Phosphate transporter family INQ56_06220 PF01865 Protein of unknown function DUF47 INQ56_06240 PF00528 Binding-protein-dependent transport system inner membrane component INQ56_06245 PF00528 Binding-protein-dependent transport system inner membrane component INQ56_06250 PF12857 TOBE-like domain INQ56_06250 PF17850 CysA C-terminal regulatory domain INQ56_06250 PF00005 ABC transporter INQ56_06260 PF03611 PTS system sugar-specific permease component INQ56_06275 PF08240 Alcohol dehydrogenase GroES-like domain INQ56_06275 PF00107 Zinc-binding dehydrogenase INQ56_06280 PF00676 Dehydrogenase E1 component INQ56_06285 PF00364 Biotin-requiring enzyme INQ56_06285 PF02779 Transketolase, pyrimidine binding domain INQ56_06285 PF02780 Transketolase, C-terminal domain INQ56_06290 PF00364 Biotin-requiring enzyme INQ56_06290 PF02817 e3 binding domain INQ56_06290 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) INQ56_06295 PF07992 Pyridine nucleotide-disulphide oxidoreductase INQ56_06295 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain INQ56_06310 PF04198 Putative sugar-binding domain INQ56_06320 PF13520 Amino acid permease INQ56_06325 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily INQ56_06330 PF13180 PDZ domain INQ56_06335 PF03807 NADP oxidoreductase coenzyme F420-dependent INQ56_06335 PF14748 Pyrroline-5-carboxylate reductase dimerisation INQ56_06340 PF04951 D-aminopeptidase INQ56_06345 PF00528 Binding-protein-dependent transport system inner membrane component INQ56_06350 PF00528 Binding-protein-dependent transport system inner membrane component INQ56_06350 PF12911 N-terminal TM domain of oligopeptide transport permease C INQ56_06355 PF08352 Oligopeptide/dipeptide transporter, C-terminal region INQ56_06355 PF00005 ABC transporter INQ56_06360 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle INQ56_06365 PF02016 LD-carboxypeptidase N-terminal domain INQ56_06365 PF17676 LD-carboxypeptidase C-terminal domain INQ56_06370 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain INQ56_06370 PF13378 Enolase C-terminal domain-like INQ56_06375 PF00877 NlpC/P60 family INQ56_06380 PF08352 Oligopeptide/dipeptide transporter, C-terminal region INQ56_06380 PF00005 ABC transporter INQ56_06390 PF03061 Thioesterase superfamily INQ56_06395 PF03551 Transcriptional regulator PadR-like family INQ56_06410 PF13302 Acetyltransferase (GNAT) domain INQ56_06415 PF02805 Metal binding domain of Ada INQ56_06415 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain INQ56_06415 PF12833 Helix-turn-helix domain INQ56_06415 PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain INQ56_06420 PF00893 Small Multidrug Resistance protein INQ56_06425 PF00893 Small Multidrug Resistance protein INQ56_06435 PF00551 Formyl transferase INQ56_06435 PF01842 ACT domain INQ56_06440 PF01472 PUA domain INQ56_06440 PF00696 Amino acid kinase family INQ56_06445 PF00171 Aldehyde dehydrogenase family INQ56_06450 PF18801 response regulator aspartate phosphatase H, N terminal INQ56_06460 PF02566 OsmC-like protein INQ56_06465 PF01047 MarR family INQ56_06470 PF02566 OsmC-like protein INQ56_06475 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region INQ56_06480 PF01717 Cobalamin-independent synthase, Catalytic domain INQ56_06480 PF08267 Cobalamin-independent synthase, N-terminal domain INQ56_06485 PF00082 Subtilase family INQ56_06500 PF00072 Response regulator receiver domain INQ56_06500 PF00486 Transcriptional regulatory protein, C terminal INQ56_06505 PF00512 His Kinase A (phospho-acceptor) domain INQ56_06505 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase INQ56_06505 PF00672 HAMP domain INQ56_06510 PF03413 Peptidase propeptide and YPEB domain INQ56_06515 PF03413 Peptidase propeptide and YPEB domain INQ56_06525 PF01769 Divalent cation transporter INQ56_06525 PF03448 MgtE intracellular N domain INQ56_06525 PF00571 CBS domain INQ56_06535 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family INQ56_06535 PF03466 LysR substrate binding domain INQ56_06545 PF13411 MerR HTH family regulatory protein INQ56_06560 PF01047 MarR family INQ56_06565 PF03707 Bacterial signalling protein N terminal repeat INQ56_06565 PF00563 EAL domain INQ56_06565 PF00990 Diguanylate cyclase, GGDEF domain INQ56_06570 PF09335 SNARE associated Golgi protein INQ56_06575 PF03741 Integral membrane protein TerC family INQ56_06580 PF04542 Sigma-70 region 2 INQ56_06585 PF12791 Anti-sigma factor N-terminus INQ56_06590 PF00269 Small, acid-soluble spore proteins, alpha/beta type INQ56_06595 PF08876 Domain of unknown function (DUF1836) INQ56_06600 PF01435 Peptidase family M48 INQ56_06605 PF02386 Cation transport protein INQ56_06610 PF04239 Protein of unknown function (DUF421) INQ56_06625 PF01757 Acyltransferase family INQ56_06630 PF13426 PAS domain INQ56_06630 PF00989 PAS fold INQ56_06630 PF00512 His Kinase A (phospho-acceptor) domain INQ56_06630 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase INQ56_06630 PF13188 PAS domain INQ56_06635 PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain INQ56_06635 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain INQ56_06640 PF01008 Initiation factor 2 subunit family INQ56_06645 PF01636 Phosphotransferase enzyme family INQ56_06650 PF00155 Aminotransferase class I and II INQ56_06655 PF00016 Ribulose bisphosphate carboxylase large chain, catalytic domain INQ56_06655 PF02788 Ribulose bisphosphate carboxylase large chain, N-terminal domain INQ56_06665 PF00596 Class II Aldolase and Adducin N-terminal domain INQ56_06670 PF03079 ARD/ARD' family INQ56_06675 PF09388 Spo0E like sporulation regulatory protein INQ56_06680 PF00512 His Kinase A (phospho-acceptor) domain INQ56_06680 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase INQ56_06680 PF02743 Cache domain INQ56_06685 PF01047 MarR family INQ56_06690 PF13677 Membrane MotB of proton-channel complex MotA/MotB INQ56_06690 PF00691 OmpA family INQ56_06695 PF01618 MotA/TolQ/ExbB proton channel family INQ56_06705 PF17871 AAA lid domain INQ56_06705 PF07724 AAA domain (Cdc48 subfamily) INQ56_06705 PF00004 ATPase family associated with various cellular activities (AAA) INQ56_06705 PF10431 C-terminal, D2-small domain, of ClpB protein INQ56_06715 PF06508 Queuosine biosynthesis protein QueC INQ56_06720 PF01242 6-pyruvoyl tetrahydropterin synthase INQ56_06725 PF04055 Radical SAM superfamily INQ56_06730 PF14489 QueF-like protein INQ56_06740 PF09953 Uncharacterized protein conserved in bacteria (DUF2187) INQ56_06750 PF07486 Cell Wall Hydrolase INQ56_06755 PF01943 Polysaccharide biosynthesis protein INQ56_06760 PF00578 AhpC/TSA family INQ56_06770 PF00557 Metallopeptidase family M24 INQ56_06770 PF01321 Creatinase/Prolidase N-terminal domain INQ56_06775 PF00356 Bacterial regulatory proteins, lacI family INQ56_06775 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family INQ56_06780 PF00874 PRD domain INQ56_06780 PF03123 CAT RNA binding domain INQ56_06785 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 INQ56_06785 PF00367 phosphotransferase system, EIIB INQ56_06785 PF02378 Phosphotransferase system, EIIC INQ56_06790 PF00381 PTS HPr component phosphorylation site INQ56_06795 PF05524 PEP-utilising enzyme, N-terminal INQ56_06795 PF00391 PEP-utilising enzyme, mobile domain INQ56_06795 PF02896 PEP-utilising enzyme, TIM barrel domain INQ56_06800 PF11132 Transcriptional regulator protein (SplA) INQ56_06810 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain INQ56_06810 PF02743 Cache domain INQ56_06810 PF00672 HAMP domain INQ56_06815 PF00106 short chain dehydrogenase INQ56_06820 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase INQ56_06820 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase INQ56_06825 PF00188 Cysteine-rich secretory protein family INQ56_06830 PF03717 Penicillin-binding Protein dimerisation domain INQ56_06830 PF00905 Penicillin binding protein transpeptidase domain INQ56_06840 PF00155 Aminotransferase class I and II INQ56_06845 PF01545 Cation efflux family INQ56_06845 PF16916 Dimerisation domain of Zinc Transporter INQ56_06855 PF06271 RDD family INQ56_06865 PF00072 Response regulator receiver domain INQ56_06865 PF01584 CheW-like domain INQ56_06870 PF14177 YkyB-like protein INQ56_06890 PF07690 Major Facilitator Superfamily INQ56_06895 PF03734 L,D-transpeptidase catalytic domain INQ56_06895 PF01476 LysM domain INQ56_06900 PF10518 TAT (twin-arginine translocation) pathway signal sequence INQ56_06900 PF00149 Calcineurin-like phosphoesterase INQ56_06910 PF10388 EAL-domain associated signalling protein domain INQ56_06910 PF00563 EAL domain INQ56_06915 PF05067 Manganese containing catalase INQ56_06920 PF08796 Protein of unknown function (DUF1797) INQ56_06925 PF04308 Ribonuclease H-like INQ56_06930 PF14156 Antirepressor AbbA INQ56_06940 PF03466 LysR substrate binding domain INQ56_06940 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family INQ56_06950 PF00258 Flavodoxin INQ56_06960 PF00258 Flavodoxin INQ56_06965 PF14602 Hexapeptide repeat of succinyl-transferase INQ56_06965 PF00132 Bacterial transferase hexapeptide (six repeats) INQ56_06965 PF08503 Tetrahydrodipicolinate succinyltransferase N-terminal INQ56_06970 PF07687 Peptidase dimerisation domain INQ56_06970 PF01546 Peptidase family M20/M25/M40 INQ56_06975 PF03698 Uncharacterised protein family (UPF0180) INQ56_06980 PF00924 Mechanosensitive ion channel INQ56_06985 PF00578 AhpC/TSA family INQ56_06985 PF10417 C-terminal domain of 1-Cys peroxiredoxin INQ56_06990 PF00578 AhpC/TSA family INQ56_07005 PF12804 MobA-like NTP transferase domain INQ56_07010 PF00899 ThiF family INQ56_07015 PF03454 MoeA C-terminal region (domain IV) INQ56_07015 PF03453 MoeA N-terminal region (domain I and II) INQ56_07015 PF00994 Probable molybdopterin binding domain INQ56_07020 PF03205 Molybdopterin guanine dinucleotide synthesis protein B INQ56_07025 PF02391 MoaE protein INQ56_07030 PF02597 ThiS family INQ56_07045 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion INQ56_07050 PF00005 ABC transporter INQ56_07055 PF02687 FtsX-like permease family INQ56_07055 PF12704 MacB-like periplasmic core domain INQ56_07060 PF00455 DeoR C terminal sensor domain INQ56_07060 PF08220 DeoR-like helix-turn-helix domain INQ56_07065 PF00294 pfkB family carbohydrate kinase INQ56_07070 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit INQ56_07070 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 INQ56_07075 PF10502 Signal peptidase, peptidase S26 INQ56_07085 PF00005 ABC transporter INQ56_07085 PF12848 ABC transporter INQ56_07090 PF02073 Thermophilic metalloprotease (M29) INQ56_07095 PF17447 Uncharacterized YkpC-like INQ56_07105 PF18277 AbrB C-terminal domain INQ56_07105 PF04014 Antidote-toxin recognition MazE, bacterial antitoxin INQ56_07110 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase INQ56_07110 PF00512 His Kinase A (phospho-acceptor) domain INQ56_07110 PF00989 PAS fold INQ56_07115 PF06094 Gamma-glutamyl cyclotransferase, AIG2-like INQ56_07120 PF02080 TrkA-C domain INQ56_07120 PF02254 TrkA-N domain INQ56_07125 PF13382 Adenine deaminase C-terminal domain INQ56_07125 PF01979 Amidohydrolase family INQ56_07130 PF17770 Ribonuclease J C-terminal domain INQ56_07130 PF07521 Zn-dependent metallo-hydrolase RNA specificity domain INQ56_07130 PF00753 Metallo-beta-lactamase superfamily INQ56_07135 PF07288 Protein of unknown function (DUF1447) INQ56_07145 PF01327 Polypeptide deformylase INQ56_07160 PF00676 Dehydrogenase E1 component INQ56_07165 PF02780 Transketolase, C-terminal domain INQ56_07165 PF02779 Transketolase, pyrimidine binding domain INQ56_07170 PF00364 Biotin-requiring enzyme INQ56_07170 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) INQ56_07170 PF02817 e3 binding domain INQ56_07175 PF07992 Pyridine nucleotide-disulphide oxidoreductase INQ56_07175 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain INQ56_07185 PF13790 SR1 protein INQ56_07190 PF03711 Orn/Lys/Arg decarboxylase, C-terminal domain INQ56_07190 PF01276 Orn/Lys/Arg decarboxylase, major domain INQ56_07195 PF05256 Uncharacterised protein family (UPF0223) INQ56_07200 PF06335 Protein of unknown function (DUF1054) INQ56_07210 PF00459 Inositol monophosphatase family INQ56_07225 PF04542 Sigma-70 region 2 INQ56_07225 PF08281 Sigma-70, region 4 INQ56_07230 PF13490 Putative zinc-finger INQ56_07245 PF00679 Elongation factor G C-terminus INQ56_07245 PF03144 Elongation factor Tu domain 2 INQ56_07245 PF14492 Elongation Factor G, domain II INQ56_07245 PF00009 Elongation factor Tu GTP binding domain INQ56_07250 PF14036 YlaH-like protein INQ56_07255 PF09963 Uncharacterized protein conserved in bacteria (DUF2197) INQ56_07260 PF09580 Sporulation lipoprotein YhcN/YlaJ (Spore_YhcN_YlaJ) INQ56_07265 PF02562 PhoH-like protein INQ56_07265 PF13638 PIN domain INQ56_07275 PF04960 Glutaminase INQ56_07280 PF07408 Protein of unknown function (DUF1507) INQ56_07285 PF01098 Cell cycle protein INQ56_07290 PF02785 Biotin carboxylase C-terminal domain INQ56_07290 PF00289 Biotin carboxylase, N-terminal domain INQ56_07290 PF00364 Biotin-requiring enzyme INQ56_07290 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain INQ56_07290 PF00682 HMGL-like INQ56_07290 PF02436 Conserved carboxylase domain INQ56_07295 PF03441 FAD binding domain of DNA photolyase INQ56_07295 PF00875 DNA photolyase INQ56_07300 PF02628 Cytochrome oxidase assembly protein INQ56_07305 PF01040 UbiA prenyltransferase family INQ56_07310 PF02790 Cytochrome C oxidase subunit II, transmembrane domain INQ56_07310 PF00116 Cytochrome C oxidase subunit II, periplasmic domain INQ56_07310 PF00034 Cytochrome c INQ56_07315 PF00115 Cytochrome C and Quinol oxidase polypeptide I INQ56_07320 PF00510 Cytochrome c oxidase subunit III INQ56_07325 PF03626 Prokaryotic Cytochrome C oxidase subunit IV INQ56_07330 PF09678 Cytochrome c oxidase caa3 assembly factor (Caa3_CtaG) INQ56_07335 PF08868 YugN-like family INQ56_07340 PF00571 CBS domain INQ56_07345 PF14504 CAP-associated N-terminal INQ56_07345 PF00188 Cysteine-rich secretory protein family INQ56_07350 PF14071 Putative coat protein INQ56_07355 PF14003 YlbE-like protein INQ56_07365 PF06133 Control of competence regulator ComK, YlbF/YmcA INQ56_07370 PF09902 Uncharacterized protein conserved in bacteria (DUF2129) INQ56_07380 PF01467 Cytidylyltransferase-like INQ56_07385 PF07670 Nucleoside recognition INQ56_07390 PF01734 Patatin-like phospholipase INQ56_07395 PF13180 PDZ domain INQ56_07395 PF05362 Lon protease (S16) C-terminal proteolytic domain INQ56_07400 PF05636 HIGH Nucleotidyl Transferase INQ56_07405 PF02620 Large ribosomal RNA subunit accumulation protein YceD INQ56_07410 PF01783 Ribosomal L32p protein family INQ56_07420 PF00583 Acetyltransferase (GNAT) family INQ56_07425 PF08546 Ketopantoate reductase PanE/ApbA C terminal INQ56_07425 PF02558 Ketopantoate reductase PanE/ApbA INQ56_07430 PF10079 Bacillithiol biosynthesis BshC INQ56_07435 PF02381 MraZ protein, putative antitoxin-like INQ56_07440 PF01795 MraW methylase family INQ56_07450 PF03793 PASTA domain INQ56_07450 PF00905 Penicillin binding protein transpeptidase domain INQ56_07450 PF03717 Penicillin-binding Protein dimerisation domain INQ56_07455 PF03717 Penicillin-binding Protein dimerisation domain INQ56_07455 PF00905 Penicillin binding protein transpeptidase domain INQ56_07455 PF03793 PASTA domain INQ56_07460 PF01225 Mur ligase family, catalytic domain INQ56_07460 PF02875 Mur ligase family, glutamate ligase domain INQ56_07460 PF08245 Mur ligase middle domain INQ56_07465 PF10555 Phospho-N-acetylmuramoyl-pentapeptide-transferase signature 1 INQ56_07465 PF00953 Glycosyl transferase family 4 INQ56_07470 PF08245 Mur ligase middle domain INQ56_07470 PF02875 Mur ligase family, glutamate ligase domain INQ56_07475 PF01098 Cell cycle protein INQ56_07480 PF04101 Glycosyltransferase family 28 C-terminal domain INQ56_07480 PF03033 Glycosyltransferase family 28 N-terminal domain INQ56_07485 PF01565 FAD binding domain INQ56_07485 PF02873 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain INQ56_07490 PF08478 POTRA domain, FtsQ-type INQ56_07495 PF05949 Bacterial protein of unknown function (DUF881) INQ56_07500 PF05949 Bacterial protein of unknown function (DUF881) INQ56_07505 PF06947 Protein of unknown function (DUF1290) INQ56_07510 PF02491 SHS2 domain inserted in FTSA INQ56_07515 PF00091 Tubulin/FtsZ family, GTPase domain INQ56_07515 PF12327 FtsZ family, C-terminal domain INQ56_07520 PF05922 Peptidase inhibitor I9 INQ56_07520 PF00082 Subtilase family INQ56_07525 PF03419 Sporulation factor SpoIIGA INQ56_07530 PF04545 Sigma-70, region 4 INQ56_07530 PF04542 Sigma-70 region 2 INQ56_07535 PF04545 Sigma-70, region 4 INQ56_07535 PF04542 Sigma-70 region 2 INQ56_07535 PF04539 Sigma-70 region 3 INQ56_07540 PF04198 Putative sugar-binding domain INQ56_07555 PF03608 PTS system enzyme II sorbitol-specific factor INQ56_07560 PF03612 Sorbitol phosphotransferase enzyme II N-terminus INQ56_07560 PF07663 Sorbitol phosphotransferase enzyme II C-terminus INQ56_07565 PF03829 PTS system glucitol/sorbitol-specific IIA component INQ56_07570 PF00005 ABC transporter INQ56_07575 PF05239 PRC-barrel domain INQ56_07580 PF02578 Multi-copper polyphenol oxidoreductase laccase INQ56_07585 PF01168 Alanine racemase, N-terminal domain INQ56_07590 PF04472 Cell division protein SepF INQ56_07595 PF02325 YGGT family INQ56_07600 PF01479 S4 domain INQ56_07600 PF17774 Putative RNA-binding domain in YlmH INQ56_07605 PF05103 DivIVA protein INQ56_07610 PF00133 tRNA synthetases class I (I, L, M and V) INQ56_07610 PF08264 Anticodon-binding domain of tRNA INQ56_07615 PF01258 Prokaryotic dksA/traR C4-type zinc finger INQ56_07620 PF01252 Signal peptidase (SPase) II INQ56_07625 PF01479 S4 domain INQ56_07625 PF00849 RNA pseudouridylate synthase INQ56_07630 PF00156 Phosphoribosyl transferase domain INQ56_07635 PF00860 Permease family INQ56_07640 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain INQ56_07640 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain INQ56_07645 PF01979 Amidohydrolase family INQ56_07650 PF00988 Carbamoyl-phosphate synthase small chain, CPSase domain INQ56_07650 PF00117 Glutamine amidotransferase class-I INQ56_07655 PF02787 Carbamoyl-phosphate synthetase large chain, oligomerisation domain INQ56_07655 PF02142 MGS-like domain INQ56_07655 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain INQ56_07660 PF10418 Iron-sulfur cluster binding domain of dihydroorotate dehydrogenase B INQ56_07665 PF01180 Dihydroorotate dehydrogenase INQ56_07670 PF00215 Orotidine 5'-phosphate decarboxylase / HUMPS family INQ56_07675 PF00156 Phosphoribosyl transferase domain INQ56_07685 PF01507 Phosphoadenosine phosphosulfate reductase family INQ56_07690 PF01384 Phosphate transporter family INQ56_07695 PF01747 ATP-sulfurylase INQ56_07695 PF14306 PUA-like domain INQ56_07705 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases INQ56_07710 PF01903 CbiX INQ56_07720 PF05670 NFACT protein RNA binding domain INQ56_07725 PF00689 Cation transporting ATPase, C-terminus INQ56_07725 PF00690 Cation transporter/ATPase, N-terminus INQ56_07730 PF03755 YicC-like family, N-terminal region INQ56_07730 PF08340 Domain of unknown function (DUF1732) INQ56_07735 PF04025 Domain of unknown function (DUF370) INQ56_07740 PF00625 Guanylate kinase INQ56_07745 PF01192 RNA polymerase Rpb6 INQ56_07750 PF02441 Flavoprotein INQ56_07750 PF04127 DNA / pantothenate metabolism flavoprotein INQ56_07755 PF04851 Type III restriction enzyme, res subunit INQ56_07755 PF18319 PriA DNA helicase Cys-rich region (CRR) domain INQ56_07755 PF00271 Helicase conserved C-terminal domain INQ56_07755 PF17764 3′ DNA-binding domain (3′BD) INQ56_07755 PF18074 Primosomal protein N C-terminal domain INQ56_07760 PF01327 Polypeptide deformylase INQ56_07765 PF00551 Formyl transferase INQ56_07765 PF02911 Formyl transferase, C-terminal domain INQ56_07770 PF01029 NusB family INQ56_07770 PF01189 16S rRNA methyltransferase RsmB/F INQ56_07775 PF04055 Radical SAM superfamily INQ56_07785 PF03793 PASTA domain INQ56_07785 PF00069 Protein kinase domain INQ56_07790 PF16745 RsgA N-terminal domain INQ56_07790 PF03193 RsgA GTPase INQ56_07795 PF00834 Ribulose-phosphate 3 epimerase family INQ56_07800 PF04265 Thiamin pyrophosphokinase, vitamin B1 binding domain INQ56_07800 PF04263 Thiamin pyrophosphokinase, catalytic domain INQ56_07805 PF08183 Stage V sporulation protein family INQ56_07810 PF00830 Ribosomal L28 family INQ56_07815 PF03780 Asp23 family, cell envelope-related function INQ56_07820 PF13684 Dihydroxyacetone kinase family INQ56_07820 PF02734 DAK2 domain INQ56_07825 PF03315 Serine dehydratase beta chain INQ56_07825 PF01842 ACT domain INQ56_07830 PF03313 Serine dehydratase alpha chain INQ56_07835 PF00271 Helicase conserved C-terminal domain INQ56_07835 PF00270 DEAD/DEAH box helicase INQ56_07835 PF17191 RecG wedge domain INQ56_07845 PF02504 Fatty acid synthesis protein INQ56_07850 PF00698 Acyl transferase domain INQ56_07860 PF00550 Phosphopantetheine attachment site INQ56_07865 PF14622 Ribonuclease-III-like INQ56_07865 PF00035 Double-stranded RNA binding motif INQ56_07870 PF02463 RecF/RecN/SMC N terminal domain INQ56_07870 PF06470 SMC proteins Flexible Hinge Domain INQ56_07875 PF02881 SRP54-type protein, helical bundle domain INQ56_07875 PF00448 SRP54-type protein, GTPase domain INQ56_07880 PF04297 Putative helix-turn-helix protein, YlxM / p13 like INQ56_07885 PF02881 SRP54-type protein, helical bundle domain INQ56_07885 PF00448 SRP54-type protein, GTPase domain INQ56_07885 PF02978 Signal peptide binding domain INQ56_07890 PF00886 Ribosomal protein S16 INQ56_07900 PF11068 YlqD protein INQ56_07905 PF05239 PRC-barrel domain INQ56_07905 PF01782 RimM N-terminal domain INQ56_07910 PF01746 tRNA (Guanine-1)-methyltransferase INQ56_07915 PF01245 Ribosomal protein L19 INQ56_07920 PF01926 50S ribosome-binding GTPase INQ56_07925 PF01351 Ribonuclease HII INQ56_07935 PF01312 FlhB HrpN YscU SpaS Family INQ56_07940 PF00549 CoA-ligase INQ56_07940 PF08442 ATP-grasp domain INQ56_07945 PF00549 CoA-ligase INQ56_07945 PF02629 CoA binding domain INQ56_07950 PF02481 DNA recombination-mediator protein A INQ56_07955 PF01396 Topoisomerase DNA binding C4 zinc finger INQ56_07955 PF01751 Toprim domain INQ56_07955 PF01131 DNA topoisomerase INQ56_07960 PF01134 Glucose inhibited division protein A INQ56_07965 PF00589 Phage integrase family INQ56_07965 PF02899 Phage integrase, N-terminal SAM-like domain INQ56_07970 PF00227 Proteasome subunit INQ56_07975 PF07724 AAA domain (Cdc48 subfamily) INQ56_07975 PF00004 ATPase family associated with various cellular activities (AAA) INQ56_07975 PF10431 C-terminal, D2-small domain, of ClpB protein INQ56_07980 PF06018 CodY GAF-like domain INQ56_07980 PF08222 CodY helix-turn-helix domain INQ56_07985 PF00460 Flagella basal body rod protein INQ56_07990 PF06429 Flagellar basal body rod FlgEFG protein C-terminal INQ56_07990 PF00460 Flagella basal body rod protein INQ56_07995 PF02049 Flagellar hook-basal body complex protein FliE INQ56_08000 PF01514 Secretory protein of YscJ/FliF family INQ56_08000 PF08345 Flagellar M-ring protein C-terminal INQ56_08005 PF14841 FliG middle domain INQ56_08005 PF14842 FliG N-terminal domain INQ56_08005 PF01706 FliG C-terminal domain INQ56_08010 PF02108 Flagellar assembly protein FliH INQ56_08015 PF18269 T3SS EscN ATPase C-terminal domain INQ56_08015 PF02874 ATP synthase alpha/beta family, beta-barrel domain INQ56_08015 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain INQ56_08020 PF02050 Flagellar FliJ protein INQ56_08025 PF03448 MgtE intracellular N domain INQ56_08030 PF02120 Flagellar hook-length control protein FliK INQ56_08035 PF03963 Flagellar hook capping protein - N-terminal region INQ56_08040 PF00460 Flagella basal body rod protein INQ56_08040 PF06429 Flagellar basal body rod FlgEFG protein C-terminal INQ56_08045 PF06289 Flagellar and Swarming motility proteins INQ56_08050 PF03748 Flagellar basal body-associated protein FliL INQ56_08055 PF02154 Flagellar motor switch protein FliM INQ56_08055 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term INQ56_08060 PF04509 CheC-like family INQ56_08060 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term INQ56_08065 PF00072 Response regulator receiver domain INQ56_08070 PF04347 Flagellar biosynthesis protein, FliO INQ56_08075 PF00813 FliP family INQ56_08080 PF01313 Bacterial export proteins, family 3 INQ56_08085 PF01311 Bacterial export proteins, family 1 INQ56_08090 PF01312 FlhB HrpN YscU SpaS Family INQ56_08095 PF00771 FHIPEP family INQ56_08100 PF00448 SRP54-type protein, GTPase domain INQ56_08105 PF10609 NUBPL iron-transfer P-loop NTPase INQ56_08110 PF01339 CheB methylesterase INQ56_08110 PF00072 Response regulator receiver domain INQ56_08115 PF02895 Signal transducing histidine kinase, homodimeric domain INQ56_08115 PF01584 CheW-like domain INQ56_08115 PF07194 P2 response regulator binding domain INQ56_08115 PF01627 Hpt domain INQ56_08115 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase INQ56_08120 PF01584 CheW-like domain INQ56_08125 PF04509 CheC-like family INQ56_08130 PF03975 CheD chemotactic sensory transduction INQ56_08135 PF04542 Sigma-70 region 2 INQ56_08135 PF04539 Sigma-70 region 3 INQ56_08135 PF04545 Sigma-70, region 4 INQ56_08145 PF00318 Ribosomal protein S2 INQ56_08150 PF00889 Elongation factor TS INQ56_08155 PF00696 Amino acid kinase family INQ56_08160 PF01765 Ribosome recycling factor INQ56_08165 PF01255 Putative undecaprenyl diphosphate synthase INQ56_08175 PF08436 1-deoxy-D-xylulose 5-phosphate reductoisomerase C-terminal domain INQ56_08175 PF02670 1-deoxy-D-xylulose 5-phosphate reductoisomerase INQ56_08175 PF13288 DXP reductoisomerase C-terminal domain INQ56_08180 PF17820 PDZ domain INQ56_08180 PF02163 Peptidase family M50 INQ56_08185 PF04073 Aminoacyl-tRNA editing domain INQ56_08185 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) INQ56_08185 PF03129 Anticodon binding domain INQ56_08190 PF02811 PHP domain INQ56_08190 PF00929 Exonuclease INQ56_08190 PF14579 Helix-hairpin-helix motif INQ56_08190 PF07733 Bacterial DNA polymerase III alpha NTPase domain INQ56_08190 PF14480 DNA polymerase III polC-type N-terminus I INQ56_08190 PF17657 Bacterial DNA polymerase III alpha subunit finger domain INQ56_08190 PF11490 DNA polymerase III polC-type N-terminus II INQ56_08195 PF00759 Glycosyl hydrolase family 9 INQ56_08195 PF00942 Cellulose binding domain INQ56_08200 PF02011 Glycosyl hydrolase family 48 INQ56_08200 PF00942 Cellulose binding domain INQ56_08200 PF00759 Glycosyl hydrolase family 9 INQ56_08205 PF12791 Anti-sigma factor N-terminus INQ56_08205 PF00331 Glycosyl hydrolase family 10 INQ56_08215 PF02576 RimP N-terminal domain INQ56_08215 PF17384 RimP C-terminal SH3 domain INQ56_08220 PF08529 NusA N-terminal domain INQ56_08220 PF00575 S1 RNA binding domain INQ56_08220 PF13184 NusA-like KH domain INQ56_08225 PF04296 Protein of unknown function (DUF448) INQ56_08230 PF01248 Ribosomal protein L7Ae/L30e/S12e/Gadd45 family INQ56_08235 PF00009 Elongation factor Tu GTP binding domain INQ56_08235 PF04760 Translation initiation factor IF-2, N-terminal region INQ56_08235 PF11987 Translation-initiation factor 2 INQ56_08240 PF04456 Protein of unknown function (DUF503) INQ56_08245 PF02033 Ribosome-binding factor A INQ56_08250 PF01509 TruB family pseudouridylate synthase (N terminal domain) INQ56_08250 PF16198 tRNA pseudouridylate synthase B C-terminal domain INQ56_08255 PF06574 FAD synthetase INQ56_08255 PF01687 Riboflavin kinase INQ56_08260 PF00312 Ribosomal protein S15 INQ56_08265 PF01138 3' exoribonuclease family, domain 1 INQ56_08265 PF03726 Polyribonucleotide nucleotidyltransferase, RNA binding domain INQ56_08265 PF00575 S1 RNA binding domain INQ56_08265 PF00013 KH domain INQ56_08265 PF03725 3' exoribonuclease family, domain 2 INQ56_08270 PF01522 Polysaccharide deacetylase INQ56_08275 PF05193 Peptidase M16 inactive domain INQ56_08275 PF00675 Insulinase (Peptidase family M16) INQ56_08285 PF00550 Phosphopantetheine attachment site INQ56_08295 PF00005 ABC transporter INQ56_08295 PF00664 ABC transporter transmembrane region INQ56_08300 PF00005 ABC transporter INQ56_08300 PF00664 ABC transporter transmembrane region INQ56_08330 PF00144 Beta-lactamase INQ56_08335 PF01941 S-adenosylmethionine synthetase (AdoMet synthetase) INQ56_08340 PF00334 Nucleoside diphosphate kinase INQ56_08370 PF01658 Myo-inositol-1-phosphate synthase INQ56_08390 PF02655 ATP-grasp domain INQ56_08395 PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain INQ56_08395 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain INQ56_08415 PF00733 Asparagine synthase INQ56_08415 PF13537 Glutamine amidotransferase domain INQ56_08420 PF05239 PRC-barrel domain INQ56_08425 PF16924 Dipicolinate synthase subunit A N-terminal domain INQ56_08425 PF01262 Alanine dehydrogenase/PNT, C-terminal domain INQ56_08430 PF02441 Flavoprotein INQ56_08435 PF01118 Semialdehyde dehydrogenase, NAD binding domain INQ56_08435 PF02774 Semialdehyde dehydrogenase, dimerisation domain INQ56_08440 PF13840 ACT domain INQ56_08440 PF00696 Amino acid kinase family INQ56_08445 PF00701 Dihydrodipicolinate synthetase family INQ56_08450 PF00753 Metallo-beta-lactamase superfamily INQ56_08450 PF17770 Ribonuclease J C-terminal domain INQ56_08450 PF07521 Zn-dependent metallo-hydrolase RNA specificity domain INQ56_08455 PF00574 Clp protease INQ56_08460 PF14035 YlzJ-like protein INQ56_08465 PF01580 FtsK/SpoIIIE family INQ56_08465 PF09397 Ftsk gamma domain INQ56_08465 PF17854 FtsK alpha domain INQ56_08470 PF07702 UTRA domain INQ56_08470 PF00392 Bacterial regulatory proteins, gntR family INQ56_08475 PF07690 Major Facilitator Superfamily INQ56_08480 PF03176 MMPL family INQ56_08485 PF05193 Peptidase M16 inactive domain INQ56_08490 PF05193 Peptidase M16 inactive domain INQ56_08490 PF00675 Insulinase (Peptidase family M16) INQ56_08500 PF03176 MMPL family INQ56_08510 PF11588 Protein of unknown function (DUF3243) INQ56_08515 PF11868 Protein of unknown function (DUF3388) INQ56_08520 PF13464 Domain of unknown function (DUF4115) INQ56_08525 PF01066 CDP-alcohol phosphatidyltransferase INQ56_08530 PF02464 Competence-damaged protein INQ56_08530 PF18146 Damage-inducible protein CinA KH domain INQ56_08530 PF00994 Probable molybdopterin binding domain INQ56_08535 PF00154 recA bacterial DNA recombination protein INQ56_08540 PF01966 HD domain INQ56_08540 PF00013 KH domain INQ56_08540 PF12072 Domain of unknown function (DUF3552) INQ56_08545 PF13277 YmdB-like protein INQ56_08550 PF04232 Stage V sporulation protein S (SpoVS) INQ56_08555 PF00873 AcrB/AcrD/AcrF family INQ56_08560 PF00107 Zinc-binding dehydrogenase INQ56_08560 PF08240 Alcohol dehydrogenase GroES-like domain INQ56_08565 PF00155 Aminotransferase class I and II INQ56_08575 PF04055 Radical SAM superfamily INQ56_08575 PF01938 TRAM domain INQ56_08575 PF00919 Uncharacterized protein family UPF0004 INQ56_08580 PF06133 Control of competence regulator ComK, YlbF/YmcA INQ56_08585 PF10628 Outer spore coat protein E (CotE) INQ56_08590 PF05190 MutS family domain IV INQ56_08590 PF01624 MutS domain I INQ56_08590 PF05188 MutS domain II INQ56_08590 PF00488 MutS domain V INQ56_08590 PF05192 MutS domain III INQ56_08595 PF08676 MutL C terminal dimerisation domain INQ56_08595 PF01119 DNA mismatch repair protein, C-terminal domain INQ56_08610 PF17735 Biofilm surface layer A INQ56_08620 PF02559 CarD-like/TRCF domain INQ56_08625 PF05908 Poly-gamma-glutamate hydrolase INQ56_08630 PF18801 response regulator aspartate phosphatase H, N terminal INQ56_08635 PF00082 Subtilase family INQ56_08640 PF05908 Poly-gamma-glutamate hydrolase INQ56_08645 PF02566 OsmC-like protein INQ56_08650 PF00893 Small Multidrug Resistance protein INQ56_08655 PF00893 Small Multidrug Resistance protein INQ56_08670 PF12788 YmaF family INQ56_08680 PF17209 Hfq protein INQ56_08695 PF07972 NrdI Flavodoxin like INQ56_08700 PF08343 Ribonucleotide reductase N-terminal INQ56_08700 PF00317 Ribonucleotide reductase, all-alpha domain INQ56_08700 PF02867 Ribonucleotide reductase, barrel domain INQ56_08705 PF00268 Ribonucleotide reductase, small chain INQ56_08715 PF01520 N-acetylmuramoyl-L-alanine amidase INQ56_08715 PF05036 Sporulation related domain INQ56_08720 PF00004 ATPase family associated with various cellular activities (AAA) INQ56_08720 PF17866 AAA lid domain INQ56_08725 PF16360 GTP-binding GTPase Middle Region INQ56_08725 PF13167 GTP-binding GTPase N-terminal INQ56_08725 PF01926 50S ribosome-binding GTPase INQ56_08730 PF06838 Methionine gamma-lyase INQ56_08735 PF13411 MerR HTH family regulatory protein INQ56_08740 PF00120 Glutamine synthetase, catalytic domain INQ56_08740 PF03951 Glutamine synthetase, beta-Grasp domain INQ56_08750 PF04740 LXG domain of WXG superfamily INQ56_08750 PF14410 HNH/ENDO VII superfamily nuclease with conserved GHE residues INQ56_08750 PF14449 Pre-toxin TG INQ56_08790 PF00293 NUDIX domain INQ56_08820 PF18801 response regulator aspartate phosphatase H, N terminal INQ56_08830 PF04740 LXG domain of WXG superfamily INQ56_08835 PF04634 Protein of unknown function, DUF600 INQ56_08850 PF01569 PAP2 superfamily INQ56_08855 PF08818 Domain of unknown function (DU1801) INQ56_08875 PF18801 response regulator aspartate phosphatase H, N terminal INQ56_08885 PF06912 Protein of unknown function (DUF1275) INQ56_08890 PF01068 ATP dependent DNA ligase domain INQ56_08895 PF02735 Ku70/Ku80 beta-barrel domain INQ56_08900 PF09954 Uncharacterized protein conserved in bacteria (DUF2188) INQ56_08910 PF02082 Transcriptional regulator INQ56_08915 PF05368 NmrA-like family INQ56_08920 PF02754 Cysteine-rich domain INQ56_08925 PF11870 Domain of unknown function (DUF3390) INQ56_08925 PF13183 4Fe-4S dicluster domain INQ56_08925 PF02589 LUD domain INQ56_08930 PF02589 LUD domain INQ56_08950 PF04239 Protein of unknown function (DUF421) INQ56_08955 PF16295 Tetracyclin repressor-like, C-terminal domain INQ56_08955 PF00440 Bacterial regulatory proteins, tetR family INQ56_08960 PF00067 Cytochrome P450 INQ56_08960 PF00667 FAD binding domain INQ56_08960 PF00258 Flavodoxin INQ56_08960 PF00175 Oxidoreductase NAD-binding domain INQ56_08965 PF00089 Trypsin INQ56_08970 PF13231 Dolichyl-phosphate-mannose-protein mannosyltransferase INQ56_08975 PF14040 Deoxyribonuclease NucA/NucB INQ56_08980 PF01740 STAS domain INQ56_08985 PF16800 IseA DL-endopeptidase inhibitor INQ56_08995 PF01726 LexA DNA binding domain INQ56_08995 PF00717 Peptidase S24-like INQ56_09000 PF01476 LysM domain INQ56_09005 PF00239 Resolvase, N terminal domain INQ56_09010 PF05979 Bacterial protein of unknown function (DUF896) INQ56_09015 PF02780 Transketolase, C-terminal domain INQ56_09015 PF00456 Transketolase, thiamine diphosphate binding domain INQ56_09015 PF02779 Transketolase, pyrimidine binding domain INQ56_09020 PF10747 Sporulation inhibitor of replication protein SirA INQ56_09025 PF03672 Uncharacterised protein family (UPF0154) INQ56_09030 PF09388 Spo0E like sporulation regulatory protein INQ56_09035 PF02683 Cytochrome C biogenesis protein transmembrane region INQ56_09040 PF07301 Protein of unknown function (DUF1453) INQ56_09045 PF11084 Protein of unknown function (DUF2621) INQ56_09055 PF08179 Small acid-soluble spore protein P family INQ56_09065 PF00694 Aconitase C-terminal domain INQ56_09065 PF00330 Aconitase family (aconitate hydratase) INQ56_09070 PF00578 AhpC/TSA family INQ56_09075 PF13040 Fur-regulated basic protein B INQ56_09080 PF08177 Small acid-soluble spore protein N family INQ56_09090 PF03061 Thioesterase superfamily INQ56_09100 PF01521 Iron-sulphur cluster biosynthesis INQ56_09105 PF02660 Glycerol-3-phosphate acyltransferase INQ56_09110 PF13380 CoA binding domain INQ56_09115 PF00204 DNA gyrase B INQ56_09115 PF00986 DNA gyrase B subunit, carboxyl terminus INQ56_09115 PF01751 Toprim domain INQ56_09115 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase INQ56_09120 PF00521 DNA gyrase/topoisomerase IV, subunit A INQ56_09120 PF03989 DNA gyrase C-terminal domain, beta-propeller INQ56_09130 PF07690 Major Facilitator Superfamily INQ56_09135 PF00180 Isocitrate/isopropylmalate dehydrogenase INQ56_09145 PF02525 Flavodoxin-like fold INQ56_09150 PF01638 HxlR-like helix-turn-helix INQ56_09165 PF02080 TrkA-C domain INQ56_09165 PF02254 TrkA-N domain INQ56_09170 PF02386 Cation transport protein INQ56_09175 PF02669 K+-transporting ATPase, c chain INQ56_09185 PF03814 Potassium-transporting ATPase A subunit INQ56_09195 PF10057 Uncharacterized conserved protein (DUF2294) INQ56_09200 PF00291 Pyridoxal-phosphate dependent enzyme INQ56_09205 PF01042 Endoribonuclease L-PSP INQ56_09215 PF00440 Bacterial regulatory proteins, tetR family INQ56_09220 PF01494 FAD binding domain INQ56_09240 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region INQ56_09245 PF07859 alpha/beta hydrolase fold INQ56_09245 PF00934 PE family INQ56_09250 PF13411 MerR HTH family regulatory protein INQ56_09260 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase INQ56_09260 PF00512 His Kinase A (phospho-acceptor) domain INQ56_09265 PF00072 Response regulator receiver domain INQ56_09265 PF00486 Transcriptional regulatory protein, C terminal INQ56_09270 PF17189 Glycosyl hydrolase family 30 beta sandwich domain INQ56_09270 PF02055 Glycosyl hydrolase family 30 TIM-barrel domain INQ56_09275 PF03422 Carbohydrate binding module (family 6) INQ56_09275 PF04616 Glycosyl hydrolases family 43 INQ56_09280 PF00171 Aldehyde dehydrogenase family INQ56_09285 PF11975 Family 4 glycosyl hydrolase C-terminal domain INQ56_09285 PF02056 Family 4 glycosyl hydrolase INQ56_09290 PF00528 Binding-protein-dependent transport system inner membrane component INQ56_09295 PF00528 Binding-protein-dependent transport system inner membrane component INQ56_09300 PF01547 Bacterial extracellular solute-binding protein INQ56_09305 PF00356 Bacterial regulatory proteins, lacI family INQ56_09310 PF00834 Ribulose-phosphate 3 epimerase family INQ56_09325 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 INQ56_09330 PF00583 Acetyltransferase (GNAT) family INQ56_09335 PF00155 Aminotransferase class I and II INQ56_09335 PF00392 Bacterial regulatory proteins, gntR family INQ56_09340 PF18593 CdiI immunity protein INQ56_09350 PF14410 HNH/ENDO VII superfamily nuclease with conserved GHE residues INQ56_09350 PF04740 LXG domain of WXG superfamily INQ56_09350 PF14449 Pre-toxin TG INQ56_09355 PF01047 MarR family INQ56_09360 PF07690 Major Facilitator Superfamily INQ56_09365 PF01116 Fructose-bisphosphate aldolase class-II INQ56_09370 PF02378 Phosphotransferase system, EIIC INQ56_09370 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 INQ56_09370 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit INQ56_09375 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 INQ56_09375 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit INQ56_09380 PF00294 pfkB family carbohydrate kinase INQ56_09385 PF01418 Helix-turn-helix domain, rpiR family INQ56_09385 PF01380 SIS domain INQ56_09390 PF13091 PLD-like domain INQ56_09410 PF00171 Aldehyde dehydrogenase family INQ56_09415 PF00667 FAD binding domain INQ56_09415 PF00175 Oxidoreductase NAD-binding domain INQ56_09415 PF00258 Flavodoxin INQ56_09420 PF01077 Nitrite and sulphite reductase 4Fe-4S domain INQ56_09420 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain INQ56_09425 PF13193 AMP-binding enzyme C-terminal domain INQ56_09425 PF00501 AMP-binding enzyme INQ56_09425 PF16177 Acetyl-coenzyme A synthetase N-terminus INQ56_09430 PF01039 Carboxyl transferase domain INQ56_09435 PF00378 Enoyl-CoA hydratase/isomerase INQ56_09440 PF00682 HMGL-like INQ56_09445 PF00364 Biotin-requiring enzyme INQ56_09450 PF02785 Biotin carboxylase C-terminal domain INQ56_09450 PF00289 Biotin carboxylase, N-terminal domain INQ56_09450 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain INQ56_09455 PF13193 AMP-binding enzyme C-terminal domain INQ56_09455 PF00501 AMP-binding enzyme INQ56_09460 PF00441 Acyl-CoA dehydrogenase, C-terminal domain INQ56_09460 PF02770 Acyl-CoA dehydrogenase, middle domain INQ56_09460 PF02771 Acyl-CoA dehydrogenase, N-terminal domain INQ56_09465 PF02638 Glycosyl hydrolase-like 10 INQ56_09470 PF13350 Tyrosine phosphatase family INQ56_09475 PF00455 DeoR C terminal sensor domain INQ56_09475 PF08220 DeoR-like helix-turn-helix domain INQ56_09480 PF14552 Tautomerase enzyme INQ56_09490 PF05651 Putative sugar diacid recognition INQ56_09490 PF17853 GGDEF-like domain INQ56_09490 PF13556 PucR C-terminal helix-turn-helix domain INQ56_09495 PF01565 FAD binding domain INQ56_09495 PF02913 FAD linked oxidases, C-terminal domain INQ56_09500 PF02754 Cysteine-rich domain INQ56_09500 PF13183 4Fe-4S dicluster domain INQ56_09505 PF03323 Bacillus/Clostridium GerA spore germination protein INQ56_09510 PF03845 Spore germination protein INQ56_09520 PF12728 Helix-turn-helix domain INQ56_09525 PF04138 GtrA-like protein INQ56_09530 PF00483 Nucleotidyl transferase INQ56_09535 PF09335 SNARE associated Golgi protein INQ56_09540 PF02602 Uroporphyrinogen-III synthase HemD INQ56_09550 PF00296 Luciferase-like monooxygenase INQ56_09570 PF01554 MatE INQ56_09575 PF02113 D-Ala-D-Ala carboxypeptidase 3 (S13) family INQ56_09580 PF01095 Pectinesterase INQ56_09585 PF04239 Protein of unknown function (DUF421) INQ56_09590 PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster INQ56_09590 PF07992 Pyridine nucleotide-disulphide oxidoreductase INQ56_09595 PF04898 Glutamate synthase central domain INQ56_09595 PF01493 GXGXG motif INQ56_09595 PF00310 Glutamine amidotransferases class-II INQ56_09595 PF01645 Conserved region in glutamate synthase INQ56_09600 PF03466 LysR substrate binding domain INQ56_09600 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family INQ56_09605 PF00005 ABC transporter INQ56_09605 PF00664 ABC transporter transmembrane region INQ56_09610 PF00664 ABC transporter transmembrane region INQ56_09610 PF00005 ABC transporter INQ56_09615 PF13411 MerR HTH family regulatory protein INQ56_09615 PF06445 GyrI-like small molecule binding domain INQ56_09620 PF00583 Acetyltransferase (GNAT) family INQ56_09625 PF00171 Aldehyde dehydrogenase family INQ56_09630 PF00696 Amino acid kinase family INQ56_09630 PF01472 PUA domain INQ56_09635 PF14748 Pyrroline-5-carboxylate reductase dimerisation INQ56_09635 PF03807 NADP oxidoreductase coenzyme F420-dependent INQ56_09640 PF00067 Cytochrome P450 INQ56_09645 PF01568 Molydopterin dinucleotide binding domain INQ56_09645 PF00384 Molybdopterin oxidoreductase INQ56_09645 PF04879 Molybdopterin oxidoreductase Fe4S4 domain INQ56_09650 PF00457 Glycosyl hydrolases family 11 INQ56_09655 PF02782 FGGY family of carbohydrate kinases, C-terminal domain INQ56_09655 PF00370 FGGY family of carbohydrate kinases, N-terminal domain INQ56_09660 PF01261 Xylose isomerase-like TIM barrel INQ56_09665 PF00480 ROK family INQ56_09670 PF04616 Glycosyl hydrolases family 43 INQ56_09670 PF17851 Beta xylosidase C-terminal Concanavalin A-like domain INQ56_09680 PF01588 Putative tRNA binding domain INQ56_09690 PF14158 YndJ-like protein INQ56_09695 PF13761 Domain of unknown function (DUF4166) INQ56_09705 PF00440 Bacterial regulatory proteins, tetR family INQ56_09705 PF13305 Tetracyclin repressor-like, C-terminal domain INQ56_09710 PF00753 Metallo-beta-lactamase superfamily INQ56_09715 PF06445 GyrI-like small molecule binding domain INQ56_09720 PF08279 HTH domain INQ56_09720 PF13280 WYL domain INQ56_09730 PF01022 Bacterial regulatory protein, arsR family INQ56_09735 PF00324 Amino acid permease INQ56_09750 PF03972 MmgE/PrpD family INQ56_09755 PF00285 Citrate synthase, C-terminal domain INQ56_09760 PF04238 Protein of unknown function (DUF420) INQ56_09770 PF01476 LysM domain INQ56_09770 PF06725 3D domain INQ56_09775 PF00570 HRDC domain INQ56_09775 PF09382 RQC domain INQ56_09775 PF00271 Helicase conserved C-terminal domain INQ56_09775 PF00270 DEAD/DEAH box helicase INQ56_09775 PF16124 RecQ zinc-binding INQ56_09785 PF01258 Prokaryotic dksA/traR C4-type zinc finger INQ56_09795 PF08000 Bacterial PH domain INQ56_09810 PF00171 Aldehyde dehydrogenase family INQ56_09820 PF13243 Squalene-hopene cyclase C-terminal domain INQ56_09820 PF13249 Squalene-hopene cyclase N-terminal domain INQ56_09825 PF02777 Iron/manganese superoxide dismutases, C-terminal domain INQ56_09825 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain INQ56_09830 PF01758 Sodium Bile acid symporter family INQ56_09835 PF02817 e3 binding domain INQ56_09835 PF00364 Biotin-requiring enzyme INQ56_09835 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) INQ56_09840 PF16870 2-oxoglutarate dehydrogenase C-terminal INQ56_09840 PF00676 Dehydrogenase E1 component INQ56_09840 PF16078 2-oxoglutarate dehydrogenase N-terminus INQ56_09840 PF02779 Transketolase, pyrimidine binding domain INQ56_09845 PF00092 von Willebrand factor type A domain INQ56_09850 PF07728 AAA domain (dynein-related subfamily) INQ56_09855 PF13627 Prokaryotic lipoprotein-attachment site INQ56_09855 PF00080 Copper/zinc superoxide dismutase (SODC) INQ56_09860 PF00877 NlpC/P60 family INQ56_09860 PF01476 LysM domain INQ56_09865 PF10372 Bacterial membrane-spanning protein N-terminus INQ56_09865 PF02457 DisA bacterial checkpoint controller nucleotide-binding INQ56_09870 PF01554 MatE INQ56_09875 PF02585 GlcNAc-PI de-N-acetylase INQ56_09880 PF08830 Protein of unknown function (DUF1806) INQ56_09890 PF00892 EamA-like transporter family INQ56_09905 PF01638 HxlR-like helix-turn-helix INQ56_09910 PF00881 Nitroreductase family INQ56_09915 PF11755 Protein of unknown function (DUF3311) INQ56_09920 PF00474 Sodium:solute symporter family INQ56_09925 PF17820 PDZ domain INQ56_09925 PF03572 Peptidase family S41 INQ56_09925 PF01471 Putative peptidoglycan binding domain INQ56_09930 PF08241 Methyltransferase domain INQ56_09940 PF02557 D-alanyl-D-alanine carboxypeptidase INQ56_09945 PF01048 Phosphorylase superfamily INQ56_09950 PF14191 YodL-like INQ56_09955 PF01569 PAP2 superfamily INQ56_09960 PF14162 YozD-like protein INQ56_09975 PF06855 YozE SAM-like fold INQ56_09980 PF14122 YokU-like protein, putative antitoxin INQ56_09985 PF12544 Lysine-2,3-aminomutase INQ56_09990 PF13426 PAS domain INQ56_09990 PF02954 Bacterial regulatory protein, Fis family INQ56_09990 PF00158 Sigma-54 interaction domain INQ56_09995 PF00535 Glycosyl transferase family 2 INQ56_10010 PF12996 DUF based on E. rectale Gene description (DUF3880) INQ56_10020 PF02719 Polysaccharide biosynthesis protein INQ56_10025 PF01641 SelR domain INQ56_10030 PF01625 Peptide methionine sulfoxide reductase INQ56_10035 PF01047 MarR family INQ56_10050 PF17431 Uncharacterized YmpT-like INQ56_10055 PF09911 Uncharacterized protein conserved in bacteria (DUF2140) INQ56_10060 PF13472 GDSL-like Lipase/Acylhydrolase family INQ56_10065 PF02630 SCO1/SenC INQ56_10070 PF02645 Uncharacterised protein, DegV family COG1307 INQ56_10075 PF10751 Protein of unknown function (DUF2535) INQ56_10080 PF00291 Pyridoxal-phosphate dependent enzyme INQ56_10080 PF00585 C-terminal regulatory domain of Threonine dehydratase INQ56_10085 PF00158 Sigma-54 interaction domain INQ56_10085 PF08461 Ribonuclease R winged-helix domain INQ56_10090 PF03006 Haemolysin-III related INQ56_10100 PF00186 Dihydrofolate reductase INQ56_10105 PF00303 Thymidylate synthase INQ56_10110 PF04608 Phosphatidylglycerophosphatase A INQ56_10115 PF14005 YpjP-like protein INQ56_10120 PF04445 Putative SAM-dependent methyltransferase INQ56_10125 PF06491 Disulphide isomerase INQ56_10130 PF00920 Dehydratase family INQ56_10135 PF13769 Virulence factor INQ56_10135 PF08712 Scaffold protein Nfu/NifU N terminal INQ56_10140 PF01966 HD domain INQ56_10145 PF00255 Glutathione peroxidase INQ56_10150 PF01268 Formate--tetrahydrofolate ligase INQ56_10155 PF04204 Homoserine O-succinyltransferase INQ56_10160 PF00534 Glycosyl transferases group 1 INQ56_10160 PF06925 Monogalactosyldiacylglycerol (MGDG) synthase INQ56_10170 PF00313 'Cold-shock' DNA-binding domain INQ56_10180 PF10782 Zinc-finger INQ56_10185 PF13456 Reverse transcriptase-like INQ56_10190 PF02592 Putative vitamin uptake transporter INQ56_10195 PF13456 Reverse transcriptase-like INQ56_10205 PF01367 5'-3' exonuclease, C-terminal SAM fold INQ56_10205 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain INQ56_10215 PF00350 Dynamin family INQ56_10225 PF04140 Isoprenylcysteine carboxyl methyltransferase (ICMT) family INQ56_10230 PF02797 Chalcone and stilbene synthases, C-terminal domain INQ56_10230 PF00195 Chalcone and stilbene synthases, N-terminal domain INQ56_10235 PF04229 GrpB protein INQ56_10240 PF01522 Polysaccharide deacetylase INQ56_10245 PF00860 Permease family INQ56_10255 PF02074 Carboxypeptidase Taq (M32) metallopeptidase INQ56_10260 PF13307 Helicase C-terminal domain INQ56_10270 PF01170 Putative RNA methylase family UPF0020 INQ56_10270 PF02926 THUMP domain INQ56_10280 PF05103 DivIVA protein INQ56_10285 PF06908 YspA SLOG family INQ56_10290 PF11122 Inner spore coat protein D INQ56_10295 PF13482 RNase_H superfamily INQ56_10300 PF00270 DEAD/DEAH box helicase INQ56_10300 PF09369 Domain of unknown function (DUF1998) INQ56_10300 PF00271 Helicase conserved C-terminal domain INQ56_10305 PF00724 NADH:flavin oxidoreductase / NADH oxidase family INQ56_10310 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 INQ56_10320 PF14179 YppG-like protein INQ56_10340 PF10720 Protein of unknown function (DUF2515) INQ56_10345 PF03838 Recombination protein U INQ56_10350 PF00912 Transglycosylase INQ56_10350 PF00905 Penicillin binding protein transpeptidase domain INQ56_10360 PF10576 Iron-sulfur binding domain of endonuclease III INQ56_10360 PF00633 Helix-hairpin-helix motif INQ56_10360 PF00730 HhH-GPD superfamily base excision DNA repair protein INQ56_10365 PF07261 Replication initiation and membrane attachment INQ56_10370 PF01336 OB-fold nucleic acid binding domain INQ56_10370 PF00152 tRNA synthetases class II (D, K and N) INQ56_10375 PF17881 Domain of unknown function (DUF5590) INQ56_10375 PF03413 Peptidase propeptide and YPEB domain INQ56_10380 PF14084 Protein of unknown function (DUF4264) INQ56_10385 PF13307 Helicase C-terminal domain INQ56_10385 PF04851 Type III restriction enzyme, res subunit INQ56_10385 PF00929 Exonuclease INQ56_10390 PF02261 Aspartate decarboxylase INQ56_10395 PF02569 Pantoate-beta-alanine ligase INQ56_10400 PF02548 Ketopantoate hydroxymethyltransferase INQ56_10405 PF03099 Biotin/lipoate A/B protein ligase family INQ56_10405 PF08279 HTH domain INQ56_10405 PF02237 Biotin protein ligase C terminal domain INQ56_10410 PF13735 tRNA nucleotidyltransferase domain 2 putative INQ56_10410 PF01743 Poly A polymerase head domain INQ56_10410 PF12627 Probable RNA and SrmB- binding site of polymerase A INQ56_10415 PF00534 Glycosyl transferases group 1 INQ56_10415 PF13439 Glycosyltransferase Family 4 INQ56_10420 PF02585 GlcNAc-PI de-N-acetylase INQ56_10425 PF02142 MGS-like domain INQ56_10430 PF05173 Dihydrodipicolinate reductase, C-terminus INQ56_10430 PF01113 Dihydrodipicolinate reductase, N-terminus INQ56_10435 PF03819 MazG nucleotide pyrophosphohydrolase domain INQ56_10440 PF02588 Uncharacterised 5xTM membrane BCR, YitT family COG1284 INQ56_10440 PF10035 Uncharacterized protein conserved in bacteria (DUF2179) INQ56_10445 PF09577 Sporulation protein YpjB (SpoYpjB) INQ56_10450 PF07187 Protein of unknown function (DUF1405) INQ56_10455 PF00032 Cytochrome b(C-terminal)/b6/petD INQ56_10455 PF13442 Cytochrome C oxidase, cbb3-type, subunit III INQ56_10460 PF00033 Cytochrome b/b6/petB INQ56_10465 PF00355 Rieske [2Fe-2S] domain INQ56_10470 PF10673 Protein of unknown function (DUF2487) INQ56_10475 PF08864 UPF0302 domain INQ56_10475 PF08858 IDEAL domain INQ56_10485 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) INQ56_10490 PF02153 Prephenate dehydrogenase INQ56_10490 PF01842 ACT domain INQ56_10495 PF00155 Aminotransferase class I and II INQ56_10500 PF00290 Tryptophan synthase alpha chain INQ56_10505 PF00291 Pyridoxal-phosphate dependent enzyme INQ56_10510 PF00697 N-(5'phosphoribosyl)anthranilate (PRA) isomerase INQ56_10515 PF00218 Indole-3-glycerol phosphate synthase INQ56_10520 PF02885 Glycosyl transferase family, helical bundle domain INQ56_10520 PF00591 Glycosyl transferase family, a/b domain INQ56_10525 PF00425 chorismate binding enzyme INQ56_10525 PF04715 Anthranilate synthase component I, N terminal region INQ56_10530 PF07736 Chorismate mutase type I INQ56_10535 PF01761 3-dehydroquinate synthase INQ56_10540 PF01264 Chorismate synthase INQ56_10545 PF03705 CheR methyltransferase, all-alpha domain INQ56_10545 PF01739 CheR methyltransferase, SAM binding domain INQ56_10550 PF00334 Nucleoside diphosphate kinase INQ56_10555 PF00348 Polyprenyl synthetase INQ56_10560 PF01209 ubiE/COQ5 methyltransferase family INQ56_10565 PF07307 Heptaprenyl diphosphate synthase (HEPPP synthase) subunit 1 INQ56_10570 PF02081 Tryptophan RNA-binding attenuator protein INQ56_10575 PF01227 GTP cyclohydrolase I INQ56_10580 PF00216 Bacterial DNA-binding protein INQ56_10585 PF09547 Stage IV sporulation protein A (spore_IV_A) INQ56_10595 PF10966 Protein of unknown function (DUF2768) INQ56_10600 PF01210 NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus INQ56_10600 PF07479 NAD-dependent glycerol-3-phosphate dehydrogenase C-terminus INQ56_10605 PF01926 50S ribosome-binding GTPase INQ56_10605 PF14714 KH-domain-like of EngA bacterial GTPase enzymes, C-terminal INQ56_10615 PF14045 YIEGIA protein INQ56_10625 PF14140 YpzI-like protein INQ56_10630 PF01070 FMN-dependent dehydrogenase INQ56_10635 PF00575 S1 RNA binding domain INQ56_10640 PF02224 Cytidylate kinase INQ56_10645 PF17313 Family of unknown function (DUF5359) INQ56_10650 PF12945 Flagellar protein YcgR INQ56_10650 PF07238 PilZ domain INQ56_10655 PF14620 YpeB sporulation INQ56_10655 PF03413 Peptidase propeptide and YPEB domain INQ56_10660 PF07486 Cell Wall Hydrolase INQ56_10660 PF01471 Putative peptidoglycan binding domain INQ56_10665 PF13367 PrsW family intramembrane metalloprotease INQ56_10675 PF00208 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase INQ56_10675 PF02812 Glu/Leu/Phe/Val dehydrogenase, dimerisation domain INQ56_10680 PF05389 Negative regulator of genetic competence (MecA) INQ56_10685 PF00149 Calcineurin-like phosphoesterase INQ56_10690 PF10864 Protein of unknown function (DUF2663) INQ56_10695 PF01476 LysM domain INQ56_10700 PF02517 CPBP intramembrane metalloprotease INQ56_10705 PF00270 DEAD/DEAH box helicase INQ56_10705 PF00271 Helicase conserved C-terminal domain INQ56_10710 PF14493 Helix-turn-helix domain INQ56_10720 PF12822 ECF transporter, substrate-specific component INQ56_10725 PF01842 ACT domain INQ56_10725 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain INQ56_10725 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain INQ56_10730 PF01476 LysM domain INQ56_10730 PF01551 Peptidase family M23 INQ56_10740 PF08281 Sigma-70, region 4 INQ56_10740 PF04542 Sigma-70 region 2 INQ56_10745 PF00672 HAMP domain INQ56_10745 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase INQ56_10745 PF18698 Histidine kinase sensor domain INQ56_10745 PF00512 His Kinase A (phospho-acceptor) domain INQ56_10745 PF00989 PAS fold INQ56_10750 PF00486 Transcriptional regulatory protein, C terminal INQ56_10750 PF00072 Response regulator receiver domain INQ56_10755 PF01578 Cytochrome C assembly protein INQ56_10760 PF05140 ResB-like family INQ56_10765 PF00578 AhpC/TSA family INQ56_10770 PF00849 RNA pseudouridylate synthase INQ56_10770 PF01479 S4 domain INQ56_10775 PF07670 Nucleoside recognition INQ56_10780 PF07670 Nucleoside recognition INQ56_10785 PF00768 D-alanyl-D-alanine carboxypeptidase INQ56_10785 PF07943 Penicillin-binding protein 5, C-terminal domain INQ56_10790 PF13047 Protein of unknown function (DUF3907) INQ56_10795 PF04079 Segregation and condensation complex subunit ScpB INQ56_10800 PF02616 Segregation and condensation protein ScpA INQ56_10810 PF03745 Domain of unknown function (DUF309) INQ56_10815 PF00583 Acetyltransferase (GNAT) family INQ56_10820 PF00885 6,7-dimethyl-8-ribityllumazine synthase INQ56_10825 PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase INQ56_10825 PF00925 GTP cyclohydrolase II INQ56_10830 PF00677 Lumazine binding domain INQ56_10850 PF07690 Major Facilitator Superfamily INQ56_10855 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD INQ56_10860 PF06207 Protein of unknown function (DUF1002) INQ56_10865 PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain INQ56_10865 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain INQ56_10870 PF03323 Bacillus/Clostridium GerA spore germination protein INQ56_10875 PF14097 Stage V sporulation protein AE1 INQ56_10880 PF03862 SpoVAC/SpoVAEB sporulation membrane protein INQ56_10885 PF07451 Stage V sporulation protein AD (SpoVAD) INQ56_10890 PF03862 SpoVAC/SpoVAEB sporulation membrane protein INQ56_10895 PF13782 Stage V sporulation protein AB INQ56_10900 PF12164 Stage V sporulation protein AA INQ56_10905 PF04542 Sigma-70 region 2 INQ56_10905 PF04539 Sigma-70 region 3 INQ56_10905 PF04545 Sigma-70, region 4 INQ56_10910 PF13581 Histidine kinase-like ATPase domain INQ56_10915 PF01740 STAS domain INQ56_10920 PF07943 Penicillin-binding protein 5, C-terminal domain INQ56_10920 PF00768 D-alanyl-D-alanine carboxypeptidase INQ56_10925 PF01048 Phosphorylase superfamily INQ56_10930 PF01676 Metalloenzyme superfamily INQ56_10935 PF00589 Phage integrase family INQ56_10935 PF02899 Phage integrase, N-terminal SAM-like domain INQ56_10940 PF14004 Protein of unknown function (DUF4227) INQ56_10945 PF01475 Ferric uptake regulator family INQ56_10950 PF01944 Stage II sporulation protein M INQ56_10955 PF00082 Subtilase family INQ56_10955 PF05922 Peptidase inhibitor I9 INQ56_10965 PF13673 Acetyltransferase (GNAT) domain INQ56_10975 PF00293 NUDIX domain INQ56_10980 PF00248 Aldo/keto reductase family INQ56_10990 PF12146 Serine aminopeptidase, S33 INQ56_10995 PF18801 response regulator aspartate phosphatase H, N terminal INQ56_11000 PF10827 Protein of unknown function (DUF2552) INQ56_11005 PF01521 Iron-sulphur cluster biosynthesis INQ56_11010 PF03330 Lytic transglycolase INQ56_11015 PF04229 GrpB protein INQ56_11015 PF13673 Acetyltransferase (GNAT) domain INQ56_11020 PF00583 Acetyltransferase (GNAT) family INQ56_11025 PF10787 Uncharacterised protein from bacillus cereus group INQ56_11030 PF00817 impB/mucB/samB family INQ56_11030 PF11799 impB/mucB/samB family C-terminal domain INQ56_11035 PF08863 YolD-like protein INQ56_11040 PF07690 Major Facilitator Superfamily INQ56_11045 PF00485 Phosphoribulokinase / Uridine kinase family INQ56_11050 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain INQ56_11050 PF07992 Pyridine nucleotide-disulphide oxidoreductase INQ56_11060 PF00106 short chain dehydrogenase INQ56_11065 PF00753 Metallo-beta-lactamase superfamily INQ56_11070 PF14748 Pyrroline-5-carboxylate reductase dimerisation INQ56_11070 PF03807 NADP oxidoreductase coenzyme F420-dependent INQ56_11090 PF04055 Radical SAM superfamily INQ56_11095 PF01546 Peptidase family M20/M25/M40 INQ56_11100 PF00724 NADH:flavin oxidoreductase / NADH oxidase family INQ56_11105 PF12146 Serine aminopeptidase, S33 INQ56_11110 PF12897 Alanine-glyoxylate amino-transferase INQ56_11115 PF12706 Beta-lactamase superfamily domain INQ56_11120 PF02781 Glucose-6-phosphate dehydrogenase, C-terminal domain INQ56_11120 PF00479 Glucose-6-phosphate dehydrogenase, NAD binding domain INQ56_11125 PF07702 UTRA domain INQ56_11125 PF00392 Bacterial regulatory proteins, gntR family INQ56_11130 PF00232 Glycosyl hydrolase family 1 INQ56_11135 PF02378 Phosphotransferase system, EIIC INQ56_11140 PF02255 PTS system, Lactose/Cellobiose specific IIA subunit INQ56_11145 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit INQ56_11160 PF06800 Sugar transport protein INQ56_11165 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase INQ56_11165 PF00393 6-phosphogluconate dehydrogenase, C-terminal domain INQ56_11170 PF11798 IMS family HHH motif INQ56_11170 PF11799 impB/mucB/samB family C-terminal domain INQ56_11170 PF00817 impB/mucB/samB family INQ56_11180 PF02096 60Kd inner membrane protein INQ56_11185 PF01584 CheW-like domain INQ56_11190 PF07687 Peptidase dimerisation domain INQ56_11190 PF01546 Peptidase family M20/M25/M40 INQ56_11195 PF01039 Carboxyl transferase domain INQ56_11210 PF03734 L,D-transpeptidase catalytic domain INQ56_11215 PF11728 Putative aromatic acid exporter C-terminal domain INQ56_11215 PF06081 Aromatic acid exporter family member 1 INQ56_11220 PF00005 ABC transporter INQ56_11225 PF00528 Binding-protein-dependent transport system inner membrane component INQ56_11230 PF00497 Bacterial extracellular solute-binding proteins, family 3 INQ56_11235 PF06491 Disulphide isomerase INQ56_11240 PF00781 Diacylglycerol kinase catalytic domain INQ56_11250 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) INQ56_11250 PF02817 e3 binding domain INQ56_11250 PF00364 Biotin-requiring enzyme INQ56_11255 PF02779 Transketolase, pyrimidine binding domain INQ56_11255 PF02780 Transketolase, C-terminal domain INQ56_11260 PF00676 Dehydrogenase E1 component INQ56_11265 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain INQ56_11265 PF07992 Pyridine nucleotide-disulphide oxidoreductase INQ56_11270 PF00871 Acetokinase family INQ56_11275 PF02812 Glu/Leu/Phe/Val dehydrogenase, dimerisation domain INQ56_11275 PF00208 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase INQ56_11280 PF01515 Phosphate acetyl/butaryl transferase INQ56_11285 PF00158 Sigma-54 interaction domain INQ56_11285 PF02954 Bacterial regulatory protein, Fis family INQ56_11285 PF00989 PAS fold INQ56_11290 PF11118 Protein of unknown function (DUF2627) INQ56_11295 PF03009 Glycerophosphoryl diester phosphodiesterase family INQ56_11300 PF18801 response regulator aspartate phosphatase H, N terminal INQ56_11305 PF00072 Response regulator receiver domain INQ56_11305 PF08769 Sporulation initiation factor Spo0A C terminal INQ56_11310 PF05580 SpoIVB peptidase S55 INQ56_11310 PF17820 PDZ domain INQ56_11315 PF13476 AAA domain INQ56_11320 PF01316 Arginine repressor, DNA binding domain INQ56_11320 PF02863 Arginine repressor, C-terminal domain INQ56_11325 PF01728 FtsJ-like methyltransferase INQ56_11325 PF01479 S4 domain INQ56_11330 PF02780 Transketolase, C-terminal domain INQ56_11330 PF02779 Transketolase, pyrimidine binding domain INQ56_11330 PF13292 1-deoxy-D-xylulose-5-phosphate synthase INQ56_11335 PF00348 Polyprenyl synthetase INQ56_11340 PF02609 Exonuclease VII small subunit INQ56_11345 PF13742 OB-fold nucleic acid binding domain INQ56_11345 PF02601 Exonuclease VII, large subunit INQ56_11350 PF02882 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain INQ56_11350 PF00763 Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain INQ56_11355 PF01029 NusB family INQ56_11360 PF03780 Asp23 family, cell envelope-related function INQ56_11365 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain INQ56_11365 PF00289 Biotin carboxylase, N-terminal domain INQ56_11365 PF02785 Biotin carboxylase C-terminal domain INQ56_11370 PF00364 Biotin-requiring enzyme INQ56_11375 PF12685 SpoIIIAH-like protein INQ56_11385 PF09581 Stage III sporulation protein AF (Spore_III_AF) INQ56_11390 PF09546 Stage III sporulation protein AE (spore_III_AE) INQ56_11395 PF06686 Stage III sporulation protein AC/AD protein family INQ56_11400 PF06686 Stage III sporulation protein AC/AD protein family INQ56_11405 PF09548 Stage III sporulation protein AB (spore_III_AB) INQ56_11415 PF10942 Protein of unknown function (DUF2619) INQ56_11420 PF01132 Elongation factor P (EF-P) OB domain INQ56_11420 PF09285 Elongation factor P, C-terminal INQ56_11420 PF08207 Elongation factor P (EF-P) KOW-like domain INQ56_11425 PF00557 Metallopeptidase family M24 INQ56_11425 PF01321 Creatinase/Prolidase N-terminal domain INQ56_11430 PF01220 Dehydroquinase class II INQ56_11435 PF11085 Conserved membrane protein YqhR INQ56_11440 PF07136 Protein of unknown function (DUF1385) INQ56_11450 PF01734 Patatin-like phospholipase INQ56_11455 PF02742 Iron dependent repressor, metal binding and dimerisation domain INQ56_11455 PF01325 Iron dependent repressor, N-terminal DNA binding domain INQ56_11460 PF03099 Biotin/lipoate A/B protein ligase family INQ56_11465 PF00581 Rhodanese-like domain INQ56_11470 PF02347 Glycine cleavage system P-protein INQ56_11475 PF02347 Glycine cleavage system P-protein INQ56_11480 PF08669 Glycine cleavage T-protein C-terminal barrel domain INQ56_11480 PF01571 Aminomethyltransferase folate-binding domain INQ56_11485 PF00271 Helicase conserved C-terminal domain INQ56_11485 PF00176 SNF2 family N-terminal domain INQ56_11490 PF11079 Bacterial protein YqhG of unknown function INQ56_11500 PF01381 Helix-turn-helix INQ56_11500 PF08671 Anti-repressor SinI INQ56_11505 PF12389 Camelysin metallo-endopeptidase INQ56_11520 PF13028 Protein of unknown function (DUF3889) INQ56_11525 PF14038 YqzE-like protein INQ56_11540 PF07963 Prokaryotic N-terminal methylation motif INQ56_11545 PF07963 Prokaryotic N-terminal methylation motif INQ56_11550 PF00482 Type II secretion system (T2SS), protein F INQ56_11555 PF00437 Type II/IV secretion system protein INQ56_11560 PF14361 RsbT co-antagonist protein rsbRD N-terminal domain INQ56_11560 PF01740 STAS domain INQ56_11570 PF03960 ArsC family INQ56_11575 PF11117 Protein of unknown function (DUF2626) INQ56_11580 PF00753 Metallo-beta-lactamase superfamily INQ56_11585 PF10958 Protein of unknown function (DUF2759) INQ56_11590 PF01910 Thiamine-binding protein INQ56_11595 PF07690 Major Facilitator Superfamily INQ56_11600 PF00246 Zinc carboxypeptidase INQ56_11605 PF00884 Sulfatase INQ56_11610 PF00480 ROK family INQ56_11615 PF06014 Bacterial protein of unknown function (DUF910) INQ56_11620 PF01694 Rhomboid family INQ56_11635 PF01812 5-formyltetrahydrofolate cyclo-ligase family INQ56_11640 PF00471 Ribosomal protein L33 INQ56_11655 PF00005 ABC transporter INQ56_11660 PF00005 ABC transporter INQ56_11665 PF00528 Binding-protein-dependent transport system inner membrane component INQ56_11670 PF00528 Binding-protein-dependent transport system inner membrane component INQ56_11675 PF12849 PBP superfamily domain INQ56_11680 PF00905 Penicillin binding protein transpeptidase domain INQ56_11680 PF03717 Penicillin-binding Protein dimerisation domain INQ56_11685 PF07690 Major Facilitator Superfamily INQ56_11690 PF02777 Iron/manganese superoxide dismutases, C-terminal domain INQ56_11690 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain INQ56_11695 PF04306 Protein of unknown function (DUF456) INQ56_11700 PF06691 Protein of unknown function (DUF1189) INQ56_11705 PF13302 Acetyltransferase (GNAT) domain INQ56_11715 PF04551 GcpE protein INQ56_11730 PF00480 ROK family INQ56_11735 PF01475 Ferric uptake regulator family INQ56_11740 PF00950 ABC 3 transport family INQ56_11745 PF00005 ABC transporter INQ56_11750 PF02588 Uncharacterised 5xTM membrane BCR, YitT family COG1284 INQ56_11750 PF10035 Uncharacterized protein conserved in bacteria (DUF2179) INQ56_11755 PF11116 Protein of unknown function (DUF2624) INQ56_11760 PF01261 Xylose isomerase-like TIM barrel INQ56_11765 PF00270 DEAD/DEAH box helicase INQ56_11765 PF00271 Helicase conserved C-terminal domain INQ56_11775 PF02401 LytB protein INQ56_11780 PF01784 NIF3 (NGG1p interacting factor 3) INQ56_11785 PF04816 tRNA (adenine(22)-N(1))-methyltransferase INQ56_11790 PF13442 Cytochrome C oxidase, cbb3-type, subunit III INQ56_11795 PF04539 Sigma-70 region 3 INQ56_11795 PF03979 Sigma-70 factor, region 1.1 INQ56_11795 PF04545 Sigma-70, region 4 INQ56_11795 PF00140 Sigma-70 factor, region 1.2 INQ56_11795 PF04542 Sigma-70 region 2 INQ56_11800 PF10410 DnaB-helicase binding domain of primase INQ56_11800 PF08275 DNA primase catalytic core, N-terminal domain INQ56_11800 PF01807 CHC2 zinc finger INQ56_11805 PF02639 Uncharacterized BCR, YaiI/YqxD family COG1671 INQ56_11810 PF03618 Kinase/pyrophosphorylase INQ56_11815 PF08279 HTH domain INQ56_11815 PF00571 CBS domain INQ56_11820 PF02092 Glycyl-tRNA synthetase beta subunit INQ56_11825 PF02091 Glycyl-tRNA synthetase alpha subunit INQ56_11830 PF11967 Recombination protein O N terminal INQ56_11830 PF02565 Recombination protein O C terminal INQ56_11835 PF14006 YqzL-like protein INQ56_11840 PF01926 50S ribosome-binding GTPase INQ56_11840 PF07650 KH domain INQ56_11845 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region INQ56_11850 PF01219 Prokaryotic diacylglycerol kinase INQ56_11855 PF02130 Uncharacterized protein family UPF0054 INQ56_11860 PF07698 7TM receptor with intracellular HD hydrolase INQ56_11860 PF07697 7TM-HD extracellular INQ56_11860 PF01966 HD domain INQ56_11865 PF02562 PhoH-like protein INQ56_11870 PF06898 Putative stage IV sporulation protein YqfD INQ56_11875 PF07873 YabP family INQ56_11885 PF12127 SigmaW regulon antibacterial INQ56_11890 PF01957 NfeD-like C-terminal, partner-binding INQ56_11890 PF01972 Serine dehydrogenase proteinase INQ56_11895 PF09424 Yqey-like protein INQ56_11900 PF01165 Ribosomal protein S21 INQ56_11905 PF02690 Na+/Pi-cotransporter INQ56_11910 PF00919 Uncharacterized protein family UPF0004 INQ56_11910 PF01938 TRAM domain INQ56_11910 PF04055 Radical SAM superfamily INQ56_11915 PF04452 RNA methyltransferase INQ56_11925 PF01556 DnaJ C terminal domain INQ56_11925 PF00684 DnaJ central domain INQ56_11925 PF00226 DnaJ domain INQ56_11930 PF00012 Hsp70 protein INQ56_11935 PF01025 GrpE INQ56_11940 PF01628 HrcA protein C terminal domain INQ56_11945 PF04055 Radical SAM superfamily INQ56_11945 PF06969 HemN C-terminal domain INQ56_11950 PF03144 Elongation factor Tu domain 2 INQ56_11950 PF00679 Elongation factor G C-terminus INQ56_11950 PF06421 GTP-binding protein LepA C-terminus INQ56_11950 PF00009 Elongation factor Tu GTP binding domain INQ56_11955 PF12438 Protein of unknown function (DUF3679) INQ56_11960 PF07454 Stage II sporulation protein P (SpoIIP) INQ56_11965 PF03418 Germination protease INQ56_11970 PF01649 Ribosomal protein S20 INQ56_11975 PF06144 DNA polymerase III, delta subunit INQ56_11980 PF14141 YqzM-like protein INQ56_11985 PF03772 Competence protein INQ56_11985 PF00753 Metallo-beta-lactamase superfamily INQ56_11985 PF13567 Domain of unknown function (DUF4131) INQ56_11990 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region INQ56_11995 PF10531 SLBB domain INQ56_12000 PF14748 Pyrroline-5-carboxylate reductase dimerisation INQ56_12000 PF03807 NADP oxidoreductase coenzyme F420-dependent INQ56_12005 PF13649 Methyltransferase domain INQ56_12015 PF01966 HD domain INQ56_12020 PF01467 Cytidylyltransferase-like INQ56_12025 PF01985 CRS1 / YhbY (CRM) domain INQ56_12030 PF18317 Shikimate 5'-dehydrogenase C-terminal domain INQ56_12030 PF01488 Shikimate / quinate 5-dehydrogenase INQ56_12030 PF08501 Shikimate dehydrogenase substrate binding domain INQ56_12035 PF01926 50S ribosome-binding GTPase INQ56_12045 PF08970 Sporulation inhibitor A INQ56_12055 PF00657 GDSL-like Lipase/Acylhydrolase INQ56_12060 PF01522 Polysaccharide deacetylase INQ56_12065 PF13176 Tetratricopeptide repeat INQ56_12065 PF18801 response regulator aspartate phosphatase H, N terminal INQ56_12070 PF04542 Sigma-70 region 2 INQ56_12070 PF04545 Sigma-70, region 4 INQ56_12085 PF00293 NUDIX domain INQ56_12085 PF13344 Haloacid dehalogenase-like hydrolase INQ56_12105 PF09221 Bacteriocin class IId cyclical uberolysin-like INQ56_12125 PF00005 ABC transporter INQ56_12145 PF00083 Sugar (and other) transporter INQ56_12150 PF02610 L-arabinose isomerase INQ56_12150 PF11762 L-arabinose isomerase C-terminal domain INQ56_12155 PF00596 Class II Aldolase and Adducin N-terminal domain INQ56_12165 PF00392 Bacterial regulatory proteins, gntR family INQ56_12175 PF01047 MarR family INQ56_12185 PF01380 SIS domain INQ56_12190 PF00215 Orotidine 5'-phosphate decarboxylase / HUMPS family INQ56_12195 PF01638 HxlR-like helix-turn-helix INQ56_12200 PF07859 alpha/beta hydrolase fold INQ56_12210 PF14176 YxiJ-like protein INQ56_12230 PF00905 Penicillin binding protein transpeptidase domain INQ56_12235 PF02771 Acyl-CoA dehydrogenase, N-terminal domain INQ56_12235 PF02770 Acyl-CoA dehydrogenase, middle domain INQ56_12235 PF08028 Acyl-CoA dehydrogenase, C-terminal domain INQ56_12240 PF00005 ABC transporter INQ56_12245 PF00497 Bacterial extracellular solute-binding proteins, family 3 INQ56_12250 PF00528 Binding-protein-dependent transport system inner membrane component INQ56_12255 PF00528 Binding-protein-dependent transport system inner membrane component INQ56_12260 PF05067 Manganese containing catalase INQ56_12265 PF00107 Zinc-binding dehydrogenase INQ56_12265 PF08240 Alcohol dehydrogenase GroES-like domain INQ56_12280 PF00465 Iron-containing alcohol dehydrogenase INQ56_12285 PF01235 Sodium:alanine symporter family INQ56_12290 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family INQ56_12290 PF03466 LysR substrate binding domain INQ56_12295 PF08240 Alcohol dehydrogenase GroES-like domain INQ56_12295 PF00107 Zinc-binding dehydrogenase INQ56_12300 PF08241 Methyltransferase domain INQ56_12310 PF09501 Probable sporulation protein (Bac_small_yrzI) INQ56_12315 PF14143 YrhC-like protein INQ56_12320 PF01053 Cys/Met metabolism PLP-dependent enzyme INQ56_12325 PF00291 Pyridoxal-phosphate dependent enzyme INQ56_12330 PF01048 Phosphorylase superfamily INQ56_12335 PF13649 Methyltransferase domain INQ56_12340 PF10750 Protein of unknown function (DUF2536) INQ56_12345 PF07423 Domain of unknown function (DUF1510) INQ56_12350 PF00905 Penicillin binding protein transpeptidase domain INQ56_12350 PF03717 Penicillin-binding Protein dimerisation domain INQ56_12355 PF03449 Transcription elongation factor, N-terminal INQ56_12355 PF01272 Transcription elongation factor, GreA/GreB, C-term INQ56_12360 PF00485 Phosphoribulokinase / Uridine kinase family INQ56_12365 PF16325 Peptidase family U32 C-terminal domain INQ56_12365 PF01136 Peptidase family U32 INQ56_12370 PF01136 Peptidase family U32 INQ56_12375 PF01596 O-methyltransferase INQ56_12380 PF02618 YceG-like family INQ56_12385 PF00108 Thiolase, N-terminal domain INQ56_12385 PF02803 Thiolase, C-terminal domain INQ56_12390 PF13193 AMP-binding enzyme C-terminal domain INQ56_12390 PF00501 AMP-binding enzyme INQ56_12395 PF02632 BioY family INQ56_12405 PF06949 Protein of unknown function (DUF1292) INQ56_12410 PF03652 Holliday junction resolvase INQ56_12415 PF06135 IreB regulatory phosphoprotein INQ56_12420 PF01411 tRNA synthetases class II (A) INQ56_12420 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain INQ56_12420 PF02272 DHHA1 domain INQ56_12425 PF01594 AI-2E family transporter INQ56_12435 PF00497 Bacterial extracellular solute-binding proteins, family 3 INQ56_12440 PF00528 Binding-protein-dependent transport system inner membrane component INQ56_12445 PF00528 Binding-protein-dependent transport system inner membrane component INQ56_12460 PF05239 PRC-barrel domain INQ56_12465 PF18335 ATP-dependent RecD-like DNA helicase SH3 domain INQ56_12465 PF13538 UvrD-like helicase C-terminal domain INQ56_12465 PF14490 Helix-hairpin-helix containing domain INQ56_12470 PF07719 Tetratricopeptide repeat INQ56_12470 PF13181 Tetratricopeptide repeat INQ56_12480 PF00266 Aminotransferase class-V INQ56_12485 PF02082 Transcriptional regulator INQ56_12490 PF16193 AAA C-terminal domain INQ56_12490 PF12002 MgsA AAA+ ATPase C terminal INQ56_12490 PF05496 Holliday junction DNA helicase RuvB P-loop domain INQ56_12495 PF00899 ThiF family INQ56_12505 PF02938 GAD domain INQ56_12505 PF00152 tRNA synthetases class II (D, K and N) INQ56_12505 PF01336 OB-fold nucleic acid binding domain INQ56_12510 PF13393 Histidyl-tRNA synthetase INQ56_12510 PF03129 Anticodon binding domain INQ56_12520 PF08239 Bacterial SH3 domain INQ56_12520 PF01520 N-acetylmuramoyl-L-alanine amidase INQ56_12525 PF02580 D-Tyr-tRNA(Tyr) deacylase INQ56_12530 PF02824 TGS domain INQ56_12530 PF13291 ACT domain INQ56_12530 PF04607 Region found in RelA / SpoT proteins INQ56_12535 PF00156 Phosphoribosyl transferase domain INQ56_12540 PF10141 Single-strand DNA-specific exonuclease, C terminal domain INQ56_12540 PF17768 RecJ OB domain INQ56_12540 PF02272 DHHA1 domain INQ56_12540 PF01368 DHH family INQ56_12545 PF06305 Lipopolysaccharide assembly protein A domain INQ56_12550 PF02080 TrkA-C domain INQ56_12555 PF07549 SecD/SecF GG Motif INQ56_12555 PF02355 Protein export membrane protein INQ56_12560 PF13797 Post-transcriptional regulator INQ56_12565 PF01943 Polysaccharide biosynthesis protein INQ56_12565 PF14667 Polysaccharide biosynthesis C-terminal domain INQ56_12570 PF04239 Protein of unknown function (DUF421) INQ56_12575 PF12670 Protein of unknown function (DUF3792) INQ56_12580 PF02699 Preprotein translocase subunit INQ56_12585 PF01702 Queuine tRNA-ribosyltransferase INQ56_12590 PF02547 Queuosine biosynthesis protein INQ56_12595 PF11146 Protein of unknown function (DUF2905) INQ56_12600 PF17864 RuvB AAA lid domain INQ56_12600 PF05491 RuvB C-terminal winged helix domain INQ56_12600 PF05496 Holliday junction DNA helicase RuvB P-loop domain INQ56_12605 PF07499 RuvA, C-terminal domain INQ56_12605 PF01330 RuvA N terminal domain INQ56_12610 PF08955 BofC C-terminal domain INQ56_12610 PF08977 Bypass of Forespore C, N terminal INQ56_12630 PF01964 Radical SAM ThiC family INQ56_12630 PF13667 ThiC-associated domain INQ56_12640 PF09580 Sporulation lipoprotein YhcN/YlaJ (Spore_YhcN_YlaJ) INQ56_12645 PF01476 LysM domain INQ56_12650 PF02445 Quinolinate synthetase A protein INQ56_12655 PF01729 Quinolinate phosphoribosyl transferase, C-terminal domain INQ56_12655 PF02749 Quinolinate phosphoribosyl transferase, N-terminal domain INQ56_12660 PF00890 FAD binding domain INQ56_12660 PF02910 Fumarate reductase flavoprotein C-term INQ56_12665 PF00266 Aminotransferase class-V INQ56_12670 PF08279 HTH domain INQ56_12670 PF02829 3H domain INQ56_12675 PF01842 ACT domain INQ56_12675 PF00800 Prephenate dehydratase INQ56_12680 PF01842 ACT domain INQ56_12685 PF01926 50S ribosome-binding GTPase INQ56_12685 PF09269 Domain of unknown function (DUF1967) INQ56_12685 PF01018 GTP1/OBG INQ56_12690 PF14689 Sensor_kinase_SpoOB-type, alpha-helical domain INQ56_12690 PF14682 Sporulation initiation phospho-transferase B, C-terminal INQ56_12695 PF01016 Ribosomal L27 protein INQ56_12700 PF04327 Cysteine protease Prp INQ56_12705 PF00829 Ribosomal prokaryotic L21 protein INQ56_12710 PF02163 Peptidase family M50 INQ56_12715 PF01551 Peptidase family M23 INQ56_12720 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain INQ56_12725 PF03775 Septum formation inhibitor MinC, C-terminal domain INQ56_12730 PF04093 rod shape-determining protein MreD INQ56_12735 PF04085 rod shape-determining protein MreC INQ56_12745 PF04002 RadC-like JAB domain INQ56_12750 PF02545 Maf-like protein INQ56_12760 PF01478 Type IV leader peptidase family INQ56_12760 PF06750 Bacterial Peptidase A24 N-terminal domain INQ56_12765 PF08245 Mur ligase middle domain INQ56_12765 PF02875 Mur ligase family, glutamate ligase domain INQ56_12770 PF10458 Valyl tRNA synthetase tRNA binding arm INQ56_12770 PF08264 Anticodon-binding domain of tRNA INQ56_12770 PF00133 tRNA synthetases class I (I, L, M and V) INQ56_12785 PF01476 LysM domain INQ56_12790 PF00202 Aminotransferase class-III INQ56_12795 PF00490 Delta-aminolevulinic acid dehydratase INQ56_12800 PF02602 Uroporphyrinogen-III synthase HemD INQ56_12805 PF01379 Porphobilinogen deaminase, dipyromethane cofactor binding domain INQ56_12805 PF03900 Porphobilinogen deaminase, C-terminal domain INQ56_12810 PF01578 Cytochrome C assembly protein INQ56_12815 PF01488 Shikimate / quinate 5-dehydrogenase INQ56_12815 PF00745 Glutamyl-tRNAGlu reductase, dimerisation domain INQ56_12815 PF05201 Glutamyl-tRNAGlu reductase, N-terminal domain INQ56_12840 PF01926 50S ribosome-binding GTPase INQ56_12845 PF00004 ATPase family associated with various cellular activities (AAA) INQ56_12845 PF05362 Lon protease (S16) C-terminal proteolytic domain INQ56_12845 PF02190 ATP-dependent protease La (LON) substrate-binding domain INQ56_12850 PF05362 Lon protease (S16) C-terminal proteolytic domain INQ56_12850 PF00004 ATPase family associated with various cellular activities (AAA) INQ56_12855 PF06689 ClpX C4-type zinc finger INQ56_12855 PF10431 C-terminal, D2-small domain, of ClpB protein INQ56_12855 PF07724 AAA domain (Cdc48 subfamily) INQ56_12860 PF05698 Bacterial trigger factor protein (TF) C-terminus INQ56_12860 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase INQ56_12860 PF05697 Bacterial trigger factor protein (TF) INQ56_12870 PF00694 Aconitase C-terminal domain INQ56_12875 PF00330 Aconitase family (aconitate hydratase) INQ56_12880 PF00180 Isocitrate/isopropylmalate dehydrogenase INQ56_12885 PF08502 LeuA allosteric (dimerisation) domain INQ56_12885 PF00682 HMGL-like INQ56_12890 PF07991 Acetohydroxy acid isomeroreductase, NADPH-binding domain INQ56_12890 PF01450 Acetohydroxy acid isomeroreductase, catalytic domain INQ56_12895 PF10369 Small subunit of acetolactate synthase INQ56_12895 PF01842 ACT domain INQ56_12900 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain INQ56_12900 PF00205 Thiamine pyrophosphate enzyme, central domain INQ56_12900 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain INQ56_12905 PF01063 Amino-transferase class IV INQ56_12910 PF10282 Lactonase, 7-bladed beta-propeller INQ56_12915 PF06803 Protein of unknown function (DUF1232) INQ56_12920 PF04914 DltD protein INQ56_12925 PF00550 Phosphopantetheine attachment site INQ56_12930 PF03062 MBOAT, membrane-bound O-acyltransferase family INQ56_12935 PF00501 AMP-binding enzyme INQ56_12935 PF13193 AMP-binding enzyme C-terminal domain INQ56_12940 PF12459 D-Ala-teichoic acid biosynthesis protein INQ56_12960 PF01420 Type I restriction modification DNA specificity domain INQ56_12965 PF02384 N-6 DNA Methylase INQ56_12970 PF04851 Type III restriction enzyme, res subunit INQ56_12970 PF08463 EcoEI R protein C-terminal INQ56_12970 PF00271 Helicase conserved C-terminal domain INQ56_12970 PF04313 Type I restriction enzyme R protein N terminus (HSDR_N) INQ56_12990 PF12850 Calcineurin-like phosphoesterase superfamily domain INQ56_12995 PF01725 Ham1 family INQ56_13000 PF01138 3' exoribonuclease family, domain 1 INQ56_13000 PF03725 3' exoribonuclease family, domain 2 INQ56_13005 PF10646 Sporulation and spore germination INQ56_13010 PF01177 Asp/Glu/Hydantoin racemase INQ56_13015 PF01047 MarR family INQ56_13020 PF00196 Bacterial regulatory proteins, luxR family INQ56_13025 PF03600 Citrate transporter INQ56_13030 PF03466 LysR substrate binding domain INQ56_13030 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family INQ56_13035 PF04303 PrpF protein INQ56_13040 PF02237 Biotin protein ligase C terminal domain INQ56_13040 PF03099 Biotin/lipoate A/B protein ligase family INQ56_13045 PF03061 Thioesterase superfamily INQ56_13050 PF13183 4Fe-4S dicluster domain INQ56_13050 PF13085 2Fe-2S iron-sulfur cluster binding domain INQ56_13055 PF00890 FAD binding domain INQ56_13055 PF02910 Fumarate reductase flavoprotein C-term INQ56_13060 PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit INQ56_13065 PF10702 Protein of unknown function (DUF2507) INQ56_13070 PF01842 ACT domain INQ56_13070 PF13840 ACT domain INQ56_13070 PF00696 Amino acid kinase family INQ56_13075 PF02151 UvrB/uvrC motif INQ56_13075 PF08459 UvrC Helix-hairpin-helix N-terminal INQ56_13075 PF01541 GIY-YIG catalytic domain INQ56_13080 PF00085 Thioredoxin INQ56_13085 PF06964 Alpha-L-arabinofuranosidase C-terminal domain INQ56_13090 PF00766 Electron transfer flavoprotein FAD-binding domain INQ56_13090 PF01012 Electron transfer flavoprotein domain INQ56_13095 PF01012 Electron transfer flavoprotein domain INQ56_13100 PF00378 Enoyl-CoA hydratase/isomerase INQ56_13105 PF08359 YsiA-like protein, C-terminal region INQ56_13105 PF00440 Bacterial regulatory proteins, tetR family INQ56_13110 PF13193 AMP-binding enzyme C-terminal domain INQ56_13110 PF00501 AMP-binding enzyme INQ56_13120 PF03994 Domain of Unknown Function (DUF350) INQ56_13125 PF01713 Smr domain INQ56_13125 PF00488 MutS domain V INQ56_13130 PF14791 DNA polymerase beta thumb INQ56_13130 PF14716 Helix-hairpin-helix domain INQ56_13130 PF02811 PHP domain INQ56_13135 PF02674 Colicin V production protein INQ56_13140 PF05164 Cell division protein ZapA INQ56_13145 PF01351 Ribonuclease HII INQ56_13145 PF11858 Domain of unknown function (DUF3378) INQ56_13150 PF03147 Ferredoxin-fold anticodon binding domain INQ56_13150 PF03484 tRNA synthetase B5 domain INQ56_13150 PF03483 B3/4 domain INQ56_13150 PF01588 Putative tRNA binding domain INQ56_13150 PF17759 Phenylalanyl tRNA synthetase beta chain CLM domain INQ56_13155 PF02912 Aminoacyl tRNA synthetase class II, N-terminal domain INQ56_13155 PF01409 tRNA synthetases class II core domain (F) INQ56_13160 PF00588 SpoU rRNA Methylase family INQ56_13160 PF08032 RNA 2'-O ribose methyltransferase substrate binding INQ56_13165 PF14098 Small, acid-soluble spore protein I INQ56_13170 PF02554 Carbon starvation protein CstA INQ56_13170 PF13722 5TM C-terminal transporter carbon starvation CstA INQ56_13175 PF05343 M42 glutamyl aminopeptidase INQ56_13185 PF06961 Protein of unknown function (DUF1294) INQ56_13190 PF00453 Ribosomal protein L20 INQ56_13195 PF01632 Ribosomal protein L35 INQ56_13200 PF00707 Translation initiation factor IF-3, C-terminal domain INQ56_13200 PF05198 Translation initiation factor IF-3, N-terminal domain INQ56_13205 PF04172 LrgB-like family INQ56_13210 PF03788 LrgA family INQ56_13215 PF04397 LytTr DNA-binding domain INQ56_13215 PF00072 Response regulator receiver domain INQ56_13220 PF06580 Histidine kinase INQ56_13220 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase INQ56_13220 PF07694 5TMR of 5TMR-LYT INQ56_13225 PF13419 Haloacid dehalogenase-like hydrolase INQ56_13230 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain INQ56_13230 PF13426 PAS domain INQ56_13230 PF08447 PAS fold INQ56_13235 PF02824 TGS domain INQ56_13235 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) INQ56_13235 PF03129 Anticodon binding domain INQ56_13235 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain INQ56_13240 PF08812 YtxC-like family INQ56_13245 PF09335 SNARE associated Golgi protein INQ56_13250 PF01695 IstB-like ATP binding protein INQ56_13250 PF07319 Primosomal protein DnaI N-terminus INQ56_13255 PF07261 Replication initiation and membrane attachment INQ56_13260 PF03477 ATP cone domain INQ56_13270 PF02675 S-adenosylmethionine decarboxylase INQ56_13275 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain INQ56_13275 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain INQ56_13280 PF01121 Dephospho-CoA kinase INQ56_13285 PF02659 Putative manganese efflux pump INQ56_13290 PF06827 Zinc finger found in FPG and IleRS INQ56_13290 PF01149 Formamidopyrimidine-DNA glycosylase N-terminal domain INQ56_13290 PF06831 Formamidopyrimidine-DNA glycosylase H2TH domain INQ56_13295 PF00476 DNA polymerase family A INQ56_13295 PF01367 5'-3' exonuclease, C-terminal SAM fold INQ56_13295 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain INQ56_13300 PF16736 Single Cache-like INQ56_13300 PF00989 PAS fold INQ56_13300 PF00512 His Kinase A (phospho-acceptor) domain INQ56_13300 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase INQ56_13305 PF00072 Response regulator receiver domain INQ56_13305 PF00486 Transcriptional regulatory protein, C terminal INQ56_13310 PF00056 lactate/malate dehydrogenase, NAD binding domain INQ56_13310 PF02866 lactate/malate dehydrogenase, alpha/beta C-terminal domain INQ56_13315 PF00180 Isocitrate/isopropylmalate dehydrogenase INQ56_13320 PF00285 Citrate synthase, C-terminal domain INQ56_13325 PF04284 Protein of unknown function (DUF441) INQ56_13330 PF01594 AI-2E family transporter INQ56_13335 PF04186 FxsA cytoplasmic membrane protein INQ56_13340 PF02887 Pyruvate kinase, alpha/beta domain INQ56_13340 PF00224 Pyruvate kinase, barrel domain INQ56_13340 PF00391 PEP-utilising enzyme, mobile domain INQ56_13345 PF00365 Phosphofructokinase INQ56_13350 PF03255 Acetyl co-enzyme A carboxylase carboxyltransferase alpha subunit INQ56_13355 PF17848 Acetyl-coA carboxylase zinc finger domain INQ56_13355 PF01039 Carboxyl transferase domain INQ56_13360 PF03949 Malic enzyme, NAD binding domain INQ56_13360 PF00390 Malic enzyme, N-terminal domain INQ56_13365 PF01336 OB-fold nucleic acid binding domain INQ56_13365 PF02811 PHP domain INQ56_13365 PF14579 Helix-hairpin-helix motif INQ56_13365 PF17657 Bacterial DNA polymerase III alpha subunit finger domain INQ56_13365 PF07733 Bacterial DNA polymerase III alpha NTPase domain INQ56_13370 PF14034 Sporulation protein YtrH INQ56_13385 PF02272 DHHA1 domain INQ56_13385 PF01368 DHH family INQ56_13390 PF14007 YtpI-like protein INQ56_13395 PF00392 Bacterial regulatory proteins, gntR family INQ56_13395 PF07085 DRTGG domain INQ56_13395 PF00571 CBS domain INQ56_13395 PF03061 Thioesterase superfamily INQ56_13415 PF14698 Argininosuccinate lyase C-terminal INQ56_13415 PF00206 Lyase INQ56_13420 PF00764 Arginosuccinate synthase INQ56_13425 PF00994 Probable molybdopterin binding domain INQ56_13430 PF00871 Acetokinase family INQ56_13435 PF02384 N-6 DNA Methylase INQ56_13440 PF08534 Redoxin INQ56_13445 PF09579 Sporulation protein YtfJ (Spore_YtfJ) INQ56_13450 PF11167 Protein of unknown function (DUF2953) INQ56_13455 PF06271 RDD family INQ56_13460 PF01343 Peptidase family S49 INQ56_13465 PF01513 ATP-NAD kinase INQ56_13470 PF00271 Helicase conserved C-terminal domain INQ56_13470 PF00270 DEAD/DEAH box helicase INQ56_13470 PF03880 DbpA RNA binding domain INQ56_13475 PF00487 Fatty acid desaturase INQ56_13480 PF07730 Histidine kinase INQ56_13485 PF00196 Bacterial regulatory proteins, luxR family INQ56_13485 PF00072 Response regulator receiver domain INQ56_13490 PF01497 Periplasmic binding protein INQ56_13495 PF00072 Response regulator receiver domain INQ56_13495 PF00486 Transcriptional regulatory protein, C terminal INQ56_13500 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase INQ56_13505 PF01098 Cell cycle protein INQ56_13510 PF03551 Transcriptional regulator PadR-like family INQ56_13515 PF00005 ABC transporter INQ56_13520 PF02687 FtsX-like permease family INQ56_13525 PF01979 Amidohydrolase family INQ56_13530 PF02525 Flavodoxin-like fold INQ56_13545 PF01810 LysE type translocator INQ56_13550 PF13193 AMP-binding enzyme C-terminal domain INQ56_13550 PF00501 AMP-binding enzyme INQ56_13555 PF00269 Small, acid-soluble spore proteins, alpha/beta type INQ56_13560 PF02568 Thiamine biosynthesis protein (ThiI) INQ56_13560 PF02926 THUMP domain INQ56_13565 PF00266 Aminotransferase class-V INQ56_13570 PF05525 Branched-chain amino acid transport protein INQ56_13575 PF05525 Branched-chain amino acid transport protein INQ56_13580 PF06160 Septation ring formation regulator, EzrA INQ56_13585 PF02811 PHP domain INQ56_13590 PF00440 Bacterial regulatory proteins, tetR family INQ56_13595 PF13185 GAF domain INQ56_13600 PF00163 Ribosomal protein S4/S9 N-terminal domain INQ56_13600 PF01479 S4 domain INQ56_13610 PF00857 Isochorismatase family INQ56_13620 PF01674 Lipase (class 2) INQ56_13625 PF03992 Antibiotic biosynthesis monooxygenase INQ56_13630 PF01479 S4 domain INQ56_13630 PF00579 tRNA synthetases class I (W and Y) INQ56_13635 PF13193 AMP-binding enzyme C-terminal domain INQ56_13635 PF00501 AMP-binding enzyme INQ56_13640 PF00583 Acetyltransferase (GNAT) family INQ56_13645 PF00571 CBS domain INQ56_13650 PF00850 Histone deacetylase domain INQ56_13655 PF00356 Bacterial regulatory proteins, lacI family INQ56_13660 PF01817 Chorismate mutase type II INQ56_13660 PF00793 DAHP synthetase I family INQ56_13665 PF11009 Protein of unknown function (DUF2847) INQ56_13670 PF12732 YtxH-like protein INQ56_13675 PF06103 Bacterial protein of unknown function (DUF948) INQ56_13680 PF01225 Mur ligase family, catalytic domain INQ56_13680 PF02875 Mur ligase family, glutamate ligase domain INQ56_13680 PF08245 Mur ligase middle domain INQ56_13685 PF09397 Ftsk gamma domain INQ56_13685 PF17854 FtsK alpha domain INQ56_13685 PF01580 FtsK/SpoIIIE family INQ56_13690 PF01588 Putative tRNA binding domain INQ56_13690 PF14794 Domain of unknown function (DUF4479) INQ56_13695 PF07285 Protein of unknown function (DUF1444) INQ56_13700 PF00085 Thioredoxin INQ56_13710 PF11071 Nucleoside 2-deoxyribosyltransferase YtoQ INQ56_13715 PF05343 M42 glutamyl aminopeptidase INQ56_13720 PF03413 Peptidase propeptide and YPEB domain INQ56_13725 PF00390 Malic enzyme, N-terminal domain INQ56_13725 PF03949 Malic enzyme, NAD binding domain INQ56_13730 PF00753 Metallo-beta-lactamase superfamily INQ56_13735 PF02390 Putative methyltransferase INQ56_13740 PF14165 YtzH-like protein INQ56_13745 PF01636 Phosphotransferase enzyme family INQ56_13750 PF00781 Diacylglycerol kinase catalytic domain INQ56_13765 PF00291 Pyridoxal-phosphate dependent enzyme INQ56_13770 PF03575 Peptidase family S51 INQ56_13775 PF01546 Peptidase family M20/M25/M40 INQ56_13780 PF00860 Permease family INQ56_13785 PF08220 DeoR-like helix-turn-helix domain INQ56_13790 PF00849 RNA pseudouridylate synthase INQ56_13790 PF01479 S4 domain INQ56_13795 PF14667 Polysaccharide biosynthesis C-terminal domain INQ56_13795 PF01943 Polysaccharide biosynthesis protein INQ56_13810 PF02028 BCCT, betaine/carnitine/choline family transporter INQ56_13820 PF10957 Sporulation protein Cse60 INQ56_13825 PF00581 Rhodanese-like domain INQ56_13830 PF04854 Protein of unknown function, DUF624 INQ56_13835 PF01408 Oxidoreductase family, NAD-binding Rossmann fold INQ56_13835 PF02894 Oxidoreductase family, C-terminal alpha/beta domain INQ56_13845 PF07470 Glycosyl Hydrolase Family 88 INQ56_13850 PF00528 Binding-protein-dependent transport system inner membrane component INQ56_13855 PF17853 GGDEF-like domain INQ56_13855 PF12833 Helix-turn-helix domain INQ56_13860 PF01638 HxlR-like helix-turn-helix INQ56_13865 PF07690 Major Facilitator Superfamily INQ56_13870 PF00248 Aldo/keto reductase family INQ56_13875 PF13416 Bacterial extracellular solute-binding protein INQ56_13880 PF00528 Binding-protein-dependent transport system inner membrane component INQ56_13885 PF01370 NAD dependent epimerase/dehydratase family INQ56_13890 PF01738 Dienelactone hydrolase family INQ56_13895 PF13603 Leucyl-tRNA synthetase, Domain 2 INQ56_13895 PF08264 Anticodon-binding domain of tRNA INQ56_13895 PF09334 tRNA synthetases class I (M) INQ56_13895 PF00133 tRNA synthetases class I (I, L, M and V) INQ56_13900 PF14074 Protein of unknown function (DUF4257) INQ56_13905 PF01740 STAS domain INQ56_13905 PF13426 PAS domain INQ56_13915 PF04791 LMBR1-like membrane protein INQ56_13920 PF12704 MacB-like periplasmic core domain INQ56_13920 PF02687 FtsX-like permease family INQ56_13925 PF00005 ABC transporter INQ56_13935 PF00005 ABC transporter INQ56_13940 PF00392 Bacterial regulatory proteins, gntR family INQ56_13955 PF10732 Protein of unknown function (DUF2524) INQ56_13960 PF16199 Radical_SAM C-terminal domain INQ56_13960 PF04055 Radical SAM superfamily INQ56_13965 PF06962 Putative rRNA methylase INQ56_13970 PF07070 SpoOM protein INQ56_13975 PF10776 Protein of unknown function (DUF2600) INQ56_13980 PF12146 Serine aminopeptidase, S33 INQ56_13985 PF00132 Bacterial transferase hexapeptide (six repeats) INQ56_13990 PF00733 Asparagine synthase INQ56_13990 PF13537 Glutamine amidotransferase domain INQ56_13995 PF02772 S-adenosylmethionine synthetase, central domain INQ56_13995 PF00438 S-adenosylmethionine synthetase, N-terminal domain INQ56_13995 PF02773 S-adenosylmethionine synthetase, C-terminal domain INQ56_14000 PF01293 Phosphoenolpyruvate carboxykinase INQ56_14005 PF10763 Protein of unknown function (DUF2584) INQ56_14010 PF00326 Prolyl oligopeptidase family INQ56_14015 PF01593 Flavin containing amine oxidoreductase INQ56_14020 PF00535 Glycosyl transferase family 2 INQ56_14040 PF00005 ABC transporter INQ56_14045 PF00528 Binding-protein-dependent transport system inner membrane component INQ56_14055 PF00293 NUDIX domain INQ56_14060 PF02342 TerD domain INQ56_14075 PF05105 Bacteriophage holin family INQ56_14085 PF00210 Ferritin-like domain INQ56_14095 PF13115 YtkA-like INQ56_14100 PF02664 S-Ribosylhomocysteinase (LuxS) INQ56_14105 PF01809 Putative membrane protein insertion efficiency factor INQ56_14110 PF00484 Carbonic anhydrase INQ56_14115 PF09223 ZinT (YodA) periplasmic lipocalin-like zinc-recruitment INQ56_14115 PF01297 Zinc-uptake complex component A periplasmic INQ56_14120 PF01197 Ribosomal protein L31 INQ56_14125 PF01654 Cytochrome bd terminal oxidase subunit I INQ56_14130 PF02322 Cytochrome bd terminal oxidase subunit II INQ56_14135 PF07561 Domain of Unknown Function (DUF1540) INQ56_14145 PF13378 Enolase C-terminal domain-like INQ56_14145 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain INQ56_14150 PF00501 AMP-binding enzyme INQ56_14150 PF13193 AMP-binding enzyme C-terminal domain INQ56_14155 PF00378 Enoyl-CoA hydratase/isomerase INQ56_14160 PF00561 alpha/beta hydrolase fold INQ56_14165 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain INQ56_14165 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain INQ56_14165 PF16582 Middle domain of thiamine pyrophosphate INQ56_14170 PF00425 chorismate binding enzyme INQ56_14175 PF01040 UbiA prenyltransferase family INQ56_14180 PF01258 Prokaryotic dksA/traR C4-type zinc finger INQ56_14185 PF03073 TspO/MBR family INQ56_14310 PF09515 Thiamine transporter protein (Thia_YuaJ) INQ56_14315 PF00583 Acetyltransferase (GNAT) family INQ56_14320 PF06803 Protein of unknown function (DUF1232) INQ56_14325 PF01098 Cell cycle protein INQ56_14330 PF01098 Cell cycle protein INQ56_14335 PF01145 SPFH domain / Band 7 family INQ56_14335 PF15975 Flotillin INQ56_14345 PF12867 DinB superfamily INQ56_14350 PF00465 Iron-containing alcohol dehydrogenase INQ56_14355 PF00171 Aldehyde dehydrogenase family INQ56_14375 PF01510 N-acetylmuramoyl-L-alanine amidase INQ56_14375 PF01471 Putative peptidoglycan binding domain INQ56_14380 PF04688 SPP1 phage holin INQ56_14385 PF10960 BhlA holin family INQ56_14410 PF09693 Phage uncharacterised protein (Phage_XkdX) INQ56_14415 PF09636 XkdW protein INQ56_14430 PF10076 Uncharacterised protein conserved in bacteria (DUF2313) INQ56_14435 PF04865 Baseplate J-like protein INQ56_14440 PF10934 Protein of unknown function (DUF2634) INQ56_14445 PF10844 Protein of unknown function (DUF2577) INQ56_14455 PF01476 LysM domain INQ56_14460 PF01464 Transglycosylase SLT domain INQ56_14460 PF01464 Transglycosylase SLT domain INQ56_14470 PF08890 Phage XkdN-like tail assembly chaperone protein, TAC INQ56_14480 PF09393 Phage tail tube protein INQ56_14485 PF04984 Phage tail sheath protein subtilisin-like domain INQ56_14485 PF17482 Phage tail sheath C-terminal domain INQ56_14485 PF17481 Phage tail sheath protein beta-sandwich domain INQ56_14500 PF04883 Bacteriophage HK97-gp10, putative tail-component INQ56_14505 PF12206 Domain of unknown function (DUF3599) INQ56_14510 PF11436 Protein of unknown function (DUF3199) INQ56_14515 PF05065 Phage capsid family INQ56_14520 PF14550 Putative phage serine protease XkdF INQ56_14525 PF04860 Phage portal protein INQ56_14530 PF04466 Phage terminase large subunit INQ56_14530 PF17288 Terminase RNAseH like domain INQ56_14535 PF10668 Phage terminase small subunit INQ56_14540 PF08281 Sigma-70, region 4 INQ56_14545 PF17356 Phage-like element PBSX protein XtrA INQ56_14550 PF05866 Endodeoxyribonuclease RusA INQ56_14570 PF01381 Helix-turn-helix INQ56_14580 PF06968 Biotin and Thiamin Synthesis associated domain INQ56_14580 PF04055 Radical SAM superfamily INQ56_14590 PF02673 Bacitracin resistance protein BacA INQ56_14595 PF01594 AI-2E family transporter INQ56_14605 PF02894 Oxidoreductase family, C-terminal alpha/beta domain INQ56_14605 PF01408 Oxidoreductase family, NAD-binding Rossmann fold INQ56_14610 PF01965 DJ-1/PfpI family INQ56_14615 PF02743 Cache domain INQ56_14615 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain INQ56_14615 PF00672 HAMP domain INQ56_14620 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain INQ56_14620 PF02743 Cache domain INQ56_14620 PF00672 HAMP domain INQ56_14625 PF00672 HAMP domain INQ56_14625 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain INQ56_14625 PF02743 Cache domain INQ56_14630 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain INQ56_14630 PF02743 Cache domain INQ56_14630 PF00672 HAMP domain INQ56_14645 PF03060 Nitronate monooxygenase INQ56_14650 PF01894 Uncharacterised protein family UPF0047 INQ56_14655 PF01595 Cyclin M transmembrane N-terminal domain INQ56_14655 PF00571 CBS domain INQ56_14655 PF03471 Transporter associated domain INQ56_14660 PF04298 Putative neutral zinc metallopeptidase INQ56_14670 PF07885 Ion channel INQ56_14670 PF02254 TrkA-N domain INQ56_14675 PF08868 YugN-like family INQ56_14685 PF00342 Phosphoglucose isomerase INQ56_14690 PF00465 Iron-containing alcohol dehydrogenase INQ56_14695 PF00465 Iron-containing alcohol dehydrogenase INQ56_14700 PF04070 Domain of unknown function (DUF378) INQ56_14705 PF00575 S1 RNA binding domain INQ56_14710 PF00155 Aminotransferase class I and II INQ56_14715 PF01037 Lrp/AsnC ligand binding domain INQ56_14720 PF00561 alpha/beta hydrolase fold INQ56_14720 PF08386 TAP-like protein INQ56_14725 PF08958 Domain of unknown function (DUF1871) INQ56_14730 PF00155 Aminotransferase class I and II INQ56_14735 PF00512 His Kinase A (phospho-acceptor) domain INQ56_14735 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase INQ56_14745 PF08810 Kinase associated protein B INQ56_14750 PF00929 Exonuclease INQ56_14755 PF07690 Major Facilitator Superfamily INQ56_14760 PF00912 Transglycosylase INQ56_14760 PF00905 Penicillin binding protein transpeptidase domain INQ56_14765 PF04134 Protein of unknown function, DUF393 INQ56_14770 PF17328 Family of unknown function (DUF5366) INQ56_14775 PF00989 PAS fold INQ56_14775 PF17203 Single cache domain 3 INQ56_14775 PF14689 Sensor_kinase_SpoOB-type, alpha-helical domain INQ56_14775 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase INQ56_14780 PF00072 Response regulator receiver domain INQ56_14785 PF02608 ABC transporter substrate-binding protein PnrA-like INQ56_14790 PF00005 ABC transporter INQ56_14795 PF02653 Branched-chain amino acid transport system / permease component INQ56_14800 PF02653 Branched-chain amino acid transport system / permease component INQ56_14805 PF03390 2-hydroxycarboxylate transporter family INQ56_14815 PF13244 Domain of unknown function (DUF4040) INQ56_14815 PF00361 Proton-conducting membrane transporter INQ56_14815 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus INQ56_14820 PF04039 Domain related to MnhB subunit of Na+/H+ antiporter INQ56_14825 PF00420 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L INQ56_14830 PF00361 Proton-conducting membrane transporter INQ56_14835 PF01899 Na+/H+ ion antiporter subunit INQ56_14840 PF04066 Multiple resistance and pH regulation protein F (MrpF / PhaF) INQ56_14845 PF03334 Na+/H+ antiporter subunit INQ56_14850 PF03061 Thioesterase superfamily INQ56_14855 PF00196 Bacterial regulatory proteins, luxR family INQ56_14855 PF00072 Response regulator receiver domain INQ56_14860 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase INQ56_14860 PF07730 Histidine kinase INQ56_14870 PF00348 Polyprenyl synthetase INQ56_14875 PF08181 DegQ (SacQ) family INQ56_14885 PF00563 EAL domain INQ56_14885 PF08668 HDOD domain INQ56_14890 PF04095 Nicotinate phosphoribosyltransferase (NAPRTase) family INQ56_14890 PF17767 Nicotinate phosphoribosyltransferase (NAPRTase) N-terminal domain INQ56_14890 PF17956 Nicotinate phosphoribosyltransferase C-terminal domain INQ56_14895 PF00857 Isochorismatase family INQ56_14900 PF07997 Protein of unknown function (DUF1694) INQ56_14905 PF14166 YueH-like protein INQ56_14910 PF10676 Spore germination protein gerPA/gerPF INQ56_14915 PF10676 Spore germination protein gerPA/gerPF INQ56_14920 PF01594 AI-2E family transporter INQ56_14925 PF10842 Protein of unknown function (DUF2642) INQ56_14935 PF01966 HD domain INQ56_14940 PF00106 short chain dehydrogenase INQ56_14945 PF17355 Family of unknown function (DUF5383) INQ56_14955 PF12538 DNA transporter INQ56_14955 PF01580 FtsK/SpoIIIE family INQ56_14960 PF10140 WXG100 protein secretion system (Wss), protein YukC INQ56_14965 PF08817 WXG100 protein secretion system (Wss), protein YukD INQ56_14970 PF06013 Proteins of 100 residues with WXG INQ56_14975 PF06018 CodY GAF-like domain INQ56_14975 PF13556 PucR C-terminal helix-turn-helix domain INQ56_14975 PF17853 GGDEF-like domain INQ56_14980 PF01262 Alanine dehydrogenase/PNT, C-terminal domain INQ56_14980 PF05222 Alanine dehydrogenase/PNT, N-terminal domain INQ56_14985 PF02632 BioY family INQ56_14990 PF13726 Na+-H+ antiporter family INQ56_14990 PF03553 Na+/H+ antiporter family INQ56_14995 PF02789 Cytosol aminopeptidase family, N-terminal domain INQ56_14995 PF00883 Cytosol aminopeptidase family, catalytic domain INQ56_15000 PF02681 Divergent PAP2 family INQ56_15005 PF06725 3D domain INQ56_15010 PF14068 Putative membrane protein INQ56_15015 PF17302 Family of unknown function (DUF5351) INQ56_15020 PF07992 Pyridine nucleotide-disulphide oxidoreductase INQ56_15025 PF07992 Pyridine nucleotide-disulphide oxidoreductase INQ56_15040 PF13411 MerR HTH family regulatory protein INQ56_15040 PF07739 TipAS antibiotic-recognition domain INQ56_15045 PF10026 Predicted Zn-dependent protease (DUF2268) INQ56_15050 PF01521 Iron-sulphur cluster biosynthesis INQ56_15055 PF01678 Diaminopimelate epimerase INQ56_15060 PF07293 Protein of unknown function (DUF1450) INQ56_15065 PF07992 Pyridine nucleotide-disulphide oxidoreductase INQ56_15075 PF07315 Protein of unknown function (DUF1462) INQ56_15080 PF01106 NifU-like domain INQ56_15085 PF07676 WD40-like Beta Propeller Repeat INQ56_15085 PF00326 Prolyl oligopeptidase family INQ56_15090 PF00288 GHMP kinases N terminal domain INQ56_15090 PF08544 GHMP kinases C terminal INQ56_15095 PF00291 Pyridoxal-phosphate dependent enzyme INQ56_15100 PF01842 ACT domain INQ56_15100 PF03447 Homoserine dehydrogenase, NAD binding domain INQ56_15100 PF00742 Homoserine dehydrogenase INQ56_15105 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain INQ56_15105 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain INQ56_15115 PF04608 Phosphatidylglycerophosphatase A INQ56_15120 PF13344 Haloacid dehalogenase-like hydrolase INQ56_15125 PF01934 Protein of unknown function DUF86 INQ56_15130 PF06265 Protein of unknown function (DUF1027) INQ56_15135 PF09580 Sporulation lipoprotein YhcN/YlaJ (Spore_YhcN_YlaJ) INQ56_15140 PF04055 Radical SAM superfamily INQ56_15140 PF16881 N-terminal domain of lipoyl synthase of Radical_SAM family INQ56_15145 PF01551 Peptidase family M23 INQ56_15155 PF10903 Protein of unknown function (DUF2691) INQ56_15160 PF09560 Sporulation protein YunB (Spo_YunB) INQ56_15165 PF08827 Domain of unknown function (DUF1805) INQ56_15170 PF02872 5'-nucleotidase, C-terminal domain INQ56_15175 PF01904 Protein of unknown function DUF72 INQ56_15180 PF17853 GGDEF-like domain INQ56_15180 PF07905 Purine catabolism regulatory protein-like family INQ56_15180 PF13556 PucR C-terminal helix-turn-helix domain INQ56_15185 PF00190 Cupin INQ56_15190 PF07690 Major Facilitator Superfamily INQ56_15195 PF00266 Aminotransferase class-V INQ56_15200 PF04231 Endonuclease I INQ56_15210 PF01032 FecCD transport family INQ56_15215 PF01032 FecCD transport family INQ56_15220 PF01497 Periplasmic binding protein INQ56_15230 PF07859 alpha/beta hydrolase fold INQ56_15235 PF06146 Phosphate-starvation-inducible E INQ56_15240 PF00512 His Kinase A (phospho-acceptor) domain INQ56_15245 PF00072 Response regulator receiver domain INQ56_15245 PF00486 Transcriptional regulatory protein, C terminal INQ56_15250 PF04235 Protein of unknown function (DUF418) INQ56_15260 PF02525 Flavodoxin-like fold INQ56_15265 PF01370 NAD dependent epimerase/dehydratase family INQ56_15270 PF00440 Bacterial regulatory proteins, tetR family INQ56_15270 PF18665 Tetracyclin repressor-like, C-terminal domain INQ56_15280 PF13021 Domain of unknown function (DUF3885) INQ56_15285 PF01458 Uncharacterized protein family (UPF0051) INQ56_15290 PF01592 NifU-like N terminal domain INQ56_15295 PF00266 Aminotransferase class-V INQ56_15300 PF01458 Uncharacterized protein family (UPF0051) INQ56_15305 PF00005 ABC transporter INQ56_15315 PF02627 Carboxymuconolactone decarboxylase family INQ56_15320 PF03180 NLPA lipoprotein INQ56_15325 PF00528 Binding-protein-dependent transport system inner membrane component INQ56_15330 PF00005 ABC transporter INQ56_15330 PF09383 NIL domain INQ56_15335 PF02036 SCP-2 sterol transfer family INQ56_15340 PF00085 Thioredoxin INQ56_15345 PF01751 Toprim domain INQ56_15350 PF10830 Protein of unknown function (DUF2553) INQ56_15355 PF01597 Glycine cleavage H-protein INQ56_15360 PF03960 ArsC family INQ56_15365 PF02771 Acyl-CoA dehydrogenase, N-terminal domain INQ56_15365 PF02770 Acyl-CoA dehydrogenase, middle domain INQ56_15365 PF00441 Acyl-CoA dehydrogenase, C-terminal domain INQ56_15370 PF02803 Thiolase, C-terminal domain INQ56_15370 PF00108 Thiolase, N-terminal domain INQ56_15375 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain INQ56_15375 PF00378 Enoyl-CoA hydratase/isomerase INQ56_15375 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain INQ56_15380 PF14115 YuzL-like protein INQ56_15390 PF07875 Coat F domain INQ56_15395 PF10835 Protein of unknown function (DUF2573) INQ56_15400 PF00005 ABC transporter INQ56_15410 PF00106 short chain dehydrogenase INQ56_15415 PF13180 PDZ domain INQ56_15420 PF00072 Response regulator receiver domain INQ56_15420 PF00486 Transcriptional regulatory protein, C terminal INQ56_15425 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase INQ56_15425 PF00512 His Kinase A (phospho-acceptor) domain INQ56_15425 PF00672 HAMP domain INQ56_15435 PF00440 Bacterial regulatory proteins, tetR family INQ56_15440 PF00206 Lyase INQ56_15440 PF10415 Fumarase C C-terminus INQ56_15445 PF13113 Protein of unknown function (DUF3970) INQ56_15450 PF03323 Bacillus/Clostridium GerA spore germination protein INQ56_15455 PF03845 Spore germination protein INQ56_15460 PF05504 Spore germination B3/ GerAC like, C-terminal INQ56_15470 PF00072 Response regulator receiver domain INQ56_15470 PF00196 Bacterial regulatory proteins, luxR family INQ56_15475 PF07730 Histidine kinase INQ56_15475 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase INQ56_15475 PF00672 HAMP domain INQ56_15480 PF09922 Cell wall-active antibiotics response 4TMS YvqF INQ56_15490 PF04012 PspA/IM30 family INQ56_15500 PF01923 Cobalamin adenosyltransferase INQ56_15505 PF00005 ABC transporter INQ56_15510 PF01032 FecCD transport family INQ56_15515 PF01497 Periplasmic binding protein INQ56_15520 PF00295 Glycosyl hydrolases family 28 INQ56_15525 PF04295 D-galactarate dehydratase / Altronate hydrolase, C terminus INQ56_15525 PF08666 SAF domain INQ56_15530 PF01232 Mannitol dehydrogenase Rossmann domain INQ56_15530 PF08125 Mannitol dehydrogenase C-terminal domain INQ56_15535 PF00356 Bacterial regulatory proteins, lacI family INQ56_15540 PF02614 Glucuronate isomerase INQ56_15545 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase INQ56_15545 PF00512 His Kinase A (phospho-acceptor) domain INQ56_15550 PF00486 Transcriptional regulatory protein, C terminal INQ56_15550 PF00072 Response regulator receiver domain INQ56_15555 PF00005 ABC transporter INQ56_15560 PF01032 FecCD transport family INQ56_15565 PF01032 FecCD transport family INQ56_15570 PF01497 Periplasmic binding protein INQ56_15575 PF13520 Amino acid permease INQ56_15580 PF09575 Small spore protein J (Spore_SspJ) INQ56_15590 PF04307 LexA-binding, inner membrane-associated putative hydrolase INQ56_15595 PF00884 Sulfatase INQ56_15605 PF00528 Binding-protein-dependent transport system inner membrane component INQ56_15610 PF00248 Aldo/keto reductase family INQ56_15615 PF00480 ROK family INQ56_15620 PF00999 Sodium/hydrogen exchanger family INQ56_15625 PF03458 UPF0126 domain INQ56_15630 PF02600 Disulfide bond formation protein DsbB INQ56_15635 PF13462 Thioredoxin INQ56_15640 PF00403 Heavy-metal-associated domain INQ56_15645 PF00005 ABC transporter INQ56_15650 PF00950 ABC 3 transport family INQ56_15655 PF01297 Zinc-uptake complex component A periplasmic INQ56_15665 PF00440 Bacterial regulatory proteins, tetR family INQ56_15665 PF13977 BetI-type transcriptional repressor, C-terminal INQ56_15670 PF00072 Response regulator receiver domain INQ56_15670 PF08664 YcbB domain INQ56_15675 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase INQ56_15680 PF00206 Lyase INQ56_15680 PF10415 Fumarase C C-terminus INQ56_15685 PF00375 Sodium:dicarboxylate symporter family INQ56_15695 PF00403 Heavy-metal-associated domain INQ56_15700 PF00403 Heavy-metal-associated domain INQ56_15705 PF02583 Metal-sensitive transcriptional repressor INQ56_15715 PF00990 Diguanylate cyclase, GGDEF domain INQ56_15715 PF00072 Response regulator receiver domain INQ56_15725 PF00535 Glycosyl transferase family 2 INQ56_15725 PF04464 CDP-Glycerol:Poly(glycerophosphate) glycerophosphotransferase INQ56_15735 PF11867 Domain of unknown function (DUF3387) INQ56_15735 PF18766 SWI2/SNF2 ATPase INQ56_15735 PF04313 Type I restriction enzyme R protein N terminus (HSDR_N) INQ56_15745 PF02384 N-6 DNA Methylase INQ56_15755 PF01668 SmpB protein INQ56_15760 PF17876 Cold shock domain INQ56_15760 PF08206 Ribonuclease B OB domain INQ56_15760 PF00575 S1 RNA binding domain INQ56_15760 PF00773 RNB domain INQ56_15765 PF12146 Serine aminopeptidase, S33 INQ56_15770 PF03840 Preprotein translocase SecG subunit INQ56_15775 PF18277 AbrB C-terminal domain INQ56_15775 PF04014 Antidote-toxin recognition MazE, bacterial antitoxin INQ56_15780 PF01381 Helix-turn-helix INQ56_15795 PF01638 HxlR-like helix-turn-helix INQ56_15805 PF00528 Binding-protein-dependent transport system inner membrane component INQ56_15810 PF04069 Substrate binding domain of ABC-type glycine betaine transport system INQ56_15815 PF00528 Binding-protein-dependent transport system inner membrane component INQ56_15820 PF00005 ABC transporter INQ56_15820 PF00571 CBS domain INQ56_15825 PF12802 MarR family INQ56_15830 PF01914 MarC family integral membrane protein INQ56_15840 PF00583 Acetyltransferase (GNAT) family INQ56_15860 PF00005 ABC transporter INQ56_15870 PF00113 Enolase, C-terminal TIM barrel domain INQ56_15870 PF03952 Enolase, N-terminal domain INQ56_15875 PF01676 Metalloenzyme superfamily INQ56_15875 PF06415 BPG-independent PGAM N-terminus (iPGM_N) INQ56_15880 PF00121 Triosephosphate isomerase INQ56_15885 PF00162 Phosphoglycerate kinase INQ56_15890 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain INQ56_15890 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain INQ56_15895 PF04198 Putative sugar-binding domain INQ56_15900 PF00324 Amino acid permease INQ56_15905 PF00202 Aminotransferase class-III INQ56_15910 PF13426 PAS domain INQ56_15910 PF00158 Sigma-54 interaction domain INQ56_15910 PF02954 Bacterial regulatory protein, Fis family INQ56_15915 PF07729 FCD domain INQ56_15915 PF00392 Bacterial regulatory proteins, gntR family INQ56_15920 PF04552 Sigma-54, DNA binding domain INQ56_15920 PF00309 Sigma-54 factor, Activator interacting domain (AID) INQ56_15920 PF04963 Sigma-54 factor, core binding domain INQ56_15925 PF09628 YvfG protein INQ56_15930 PF01554 MatE INQ56_15935 PF08352 Oligopeptide/dipeptide transporter, C-terminal region INQ56_15935 PF00005 ABC transporter INQ56_15940 PF00005 ABC transporter INQ56_15940 PF08352 Oligopeptide/dipeptide transporter, C-terminal region INQ56_15945 PF00528 Binding-protein-dependent transport system inner membrane component INQ56_15950 PF00528 Binding-protein-dependent transport system inner membrane component INQ56_15955 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle INQ56_15960 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family INQ56_15965 PF17836 PglD N-terminal domain INQ56_15965 PF00132 Bacterial transferase hexapeptide (six repeats) INQ56_15970 PF02397 Bacterial sugar transferase INQ56_15975 PF14667 Polysaccharide biosynthesis C-terminal domain INQ56_15975 PF01943 Polysaccharide biosynthesis protein INQ56_15980 PF04230 Polysaccharide pyruvyl transferase INQ56_15985 PF00535 Glycosyl transferase family 2 INQ56_15995 PF13439 Glycosyltransferase Family 4 INQ56_15995 PF00534 Glycosyl transferases group 1 INQ56_16000 PF00535 Glycosyl transferase family 2 INQ56_16005 PF00534 Glycosyl transferases group 1 INQ56_16005 PF13439 Glycosyltransferase Family 4 INQ56_16010 PF02719 Polysaccharide biosynthesis protein INQ56_16015 PF13614 AAA domain INQ56_16020 PF02706 Chain length determinant protein INQ56_16025 PF01381 Helix-turn-helix INQ56_16025 PF08671 Anti-repressor SinI INQ56_16035 PF01497 Periplasmic binding protein INQ56_16040 PF01032 FecCD transport family INQ56_16045 PF01032 FecCD transport family INQ56_16050 PF11738 Protein of unknown function (DUF3298) INQ56_16050 PF13739 Deacetylase PdaC INQ56_16050 PF01522 Polysaccharide deacetylase INQ56_16055 PF12848 ABC transporter INQ56_16055 PF00005 ABC transporter INQ56_16060 PF00005 ABC transporter INQ56_16065 PF00005 ABC transporter INQ56_16070 PF00528 Binding-protein-dependent transport system inner membrane component INQ56_16070 PF12911 N-terminal TM domain of oligopeptide transport permease C INQ56_16075 PF00528 Binding-protein-dependent transport system inner membrane component INQ56_16080 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle INQ56_16085 PF00201 UDP-glucoronosyl and UDP-glucosyl transferase INQ56_16090 PF01497 Periplasmic binding protein INQ56_16110 PF02556 Preprotein translocase subunit SecB INQ56_16135 PF00574 Clp protease INQ56_16140 PF03641 Possible lysine decarboxylase INQ56_16145 PF03819 MazG nucleotide pyrophosphohydrolase domain INQ56_16150 PF00916 Sulfate permease family INQ56_16150 PF01740 STAS domain INQ56_16155 PF00484 Carbonic anhydrase INQ56_16160 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain INQ56_16160 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain INQ56_16165 PF00545 ribonuclease INQ56_16170 PF00375 Sodium:dicarboxylate symporter family INQ56_16175 PF00266 Aminotransferase class-V INQ56_16180 PF01380 SIS domain INQ56_16180 PF01418 Helix-turn-helix domain, rpiR family INQ56_16185 PF00797 N-acetyltransferase INQ56_16190 PF00381 PTS HPr component phosphorylation site INQ56_16195 PF14527 WhiA LAGLIDADG-like domain INQ56_16195 PF10298 WhiA N-terminal LAGLIDADG-like domain INQ56_16195 PF02650 WhiA C-terminal HTH domain INQ56_16200 PF01933 Uncharacterised protein family UPF0052 INQ56_16205 PF03668 P-loop ATPase protein family INQ56_16210 PF00293 NUDIX domain INQ56_16215 PF07992 Pyridine nucleotide-disulphide oxidoreductase INQ56_16220 PF00877 NlpC/P60 family INQ56_16230 PF01502 Phosphoribosyl-AMP cyclohydrolase INQ56_16230 PF01503 Phosphoribosyl-ATP pyrophosphohydrolase INQ56_16235 PF00977 Histidine biosynthesis protein INQ56_16240 PF00977 Histidine biosynthesis protein INQ56_16245 PF00117 Glutamine amidotransferase class-I INQ56_16250 PF00475 Imidazoleglycerol-phosphate dehydratase INQ56_16255 PF00815 Histidinol dehydrogenase INQ56_16260 PF01634 ATP phosphoribosyltransferase INQ56_16265 PF13393 Histidyl-tRNA synthetase INQ56_16270 PF13529 Peptidase_C39 like family INQ56_16275 PF13460 NAD(P)H-binding INQ56_16280 PF02082 Transcriptional regulator INQ56_16285 PF14602 Hexapeptide repeat of succinyl-transferase INQ56_16290 PF13419 Haloacid dehalogenase-like hydrolase INQ56_16295 PF07670 Nucleoside recognition INQ56_16300 PF01790 Prolipoprotein diacylglyceryl transferase INQ56_16305 PF07475 HPr Serine kinase C-terminal domain INQ56_16305 PF02603 HPr Serine kinase N terminus INQ56_16310 PF01979 Amidohydrolase family INQ56_16315 PF01182 Glucosamine-6-phosphate isomerases/6-phosphogluconolactonase INQ56_16320 PF07702 UTRA domain INQ56_16320 PF00392 Bacterial regulatory proteins, gntR family INQ56_16325 PF00149 Calcineurin-like phosphoesterase INQ56_16330 PF04020 Mycobacterial 4 TMS phage holin, superfamily IV INQ56_16335 PF04024 PspC domain INQ56_16340 PF13349 Putative adhesin INQ56_16355 PF17760 UvrA interaction domain INQ56_16355 PF17755 UvrA DNA-binding domain INQ56_16355 PF00005 ABC transporter INQ56_16360 PF00271 Helicase conserved C-terminal domain INQ56_16360 PF04851 Type III restriction enzyme, res subunit INQ56_16360 PF02151 UvrB/uvrC motif INQ56_16360 PF12344 Ultra-violet resistance protein B INQ56_16360 PF17757 UvrB interaction domain INQ56_16365 PF09964 Uncharacterized protein conserved in bacteria (DUF2198) INQ56_16370 PF01326 Pyruvate phosphate dikinase, PEP/pyruvate binding domain INQ56_16370 PF00391 PEP-utilising enzyme, mobile domain INQ56_16375 PF00440 Bacterial regulatory proteins, tetR family INQ56_16380 PF07690 Major Facilitator Superfamily INQ56_16390 PF00072 Response regulator receiver domain INQ56_16390 PF00486 Transcriptional regulatory protein, C terminal INQ56_16395 PF00512 His Kinase A (phospho-acceptor) domain INQ56_16395 PF18698 Histidine kinase sensor domain INQ56_16395 PF00989 PAS fold INQ56_16395 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase INQ56_16395 PF00672 HAMP domain INQ56_16400 PF13231 Dolichyl-phosphate-mannose-protein mannosyltransferase INQ56_16405 PF00535 Glycosyl transferase family 2 INQ56_16410 PF00324 Amino acid permease INQ56_16415 PF00881 Nitroreductase family INQ56_16420 PF01638 HxlR-like helix-turn-helix INQ56_16425 PF17820 PDZ domain INQ56_16430 PF17423 Swarming motility protein INQ56_16435 PF03572 Peptidase family S41 INQ56_16435 PF01471 Putative peptidoglycan binding domain INQ56_16435 PF17820 PDZ domain INQ56_16440 PF01925 Sulfite exporter TauE/SafE INQ56_16445 PF00877 NlpC/P60 family INQ56_16450 PF02687 FtsX-like permease family INQ56_16450 PF18075 FtsX extracellular domain INQ56_16455 PF00005 ABC transporter INQ56_16460 PF13442 Cytochrome C oxidase, cbb3-type, subunit III INQ56_16465 PF10035 Uncharacterized protein conserved in bacteria (DUF2179) INQ56_16465 PF02588 Uncharacterised 5xTM membrane BCR, YitT family COG1284 INQ56_16485 PF02810 SEC-C motif INQ56_16485 PF01043 SecA preprotein cross-linking domain INQ56_16485 PF07517 SecA DEAD-like domain INQ56_16485 PF07516 SecA Wing and Scaffold domain INQ56_16490 PF16321 Sigma 54 modulation/S30EA ribosomal protein C terminus INQ56_16490 PF02482 Sigma 54 modulation protein / S30EA ribosomal protein INQ56_16495 PF00672 HAMP domain INQ56_16495 PF02743 Cache domain INQ56_16495 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain INQ56_16510 PF02561 Flagellar protein FliS INQ56_16515 PF07196 Flagellin hook IN motif INQ56_16515 PF02465 Flagellar hook-associated protein 2 N-terminus INQ56_16515 PF07195 Flagellar hook-associated protein 2 C-terminus INQ56_16520 PF03646 FlaG protein INQ56_16525 PF02599 Global regulator protein family INQ56_16530 PF02623 FliW protein INQ56_16540 PF00700 Bacterial flagellin C-terminal helical region INQ56_16540 PF00669 Bacterial flagellin N-terminal helical region INQ56_16545 PF06429 Flagellar basal body rod FlgEFG protein C-terminal INQ56_16545 PF00460 Flagella basal body rod protein INQ56_16550 PF05130 FlgN protein INQ56_16570 PF10719 Late competence development protein ComFB INQ56_16575 PF00271 Helicase conserved C-terminal domain INQ56_16575 PF04851 Type III restriction enzyme, res subunit INQ56_16580 PF02645 Uncharacterised protein, DegV family COG1307 INQ56_16585 PF00072 Response regulator receiver domain INQ56_16585 PF00196 Bacterial regulatory proteins, luxR family INQ56_16590 PF05384 Sensor protein DegS INQ56_16590 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase INQ56_16590 PF07730 Histidine kinase INQ56_16595 PF09186 Domain of unknown function (DUF1949) INQ56_16595 PF01205 Uncharacterized protein family UPF0029 INQ56_16600 PF03816 Cell envelope-related transcriptional attenuator domain INQ56_16605 PF00953 Glycosyl transferase family 4 INQ56_16615 PF00535 Glycosyl transferase family 2 INQ56_16620 PF02706 Chain length determinant protein INQ56_16625 PF04932 O-Antigen ligase INQ56_16630 PF16363 GDP-mannose 4,6 dehydratase INQ56_16635 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain INQ56_16635 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain INQ56_16635 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain INQ56_16640 PF13439 Glycosyltransferase Family 4 INQ56_16640 PF00534 Glycosyl transferases group 1 INQ56_16645 PF01943 Polysaccharide biosynthesis protein INQ56_16645 PF14667 Polysaccharide biosynthesis C-terminal domain INQ56_16650 PF02397 Bacterial sugar transferase INQ56_16660 PF01520 N-acetylmuramoyl-L-alanine amidase INQ56_16660 PF04122 Putative cell wall binding repeat 2 INQ56_16665 PF01520 N-acetylmuramoyl-L-alanine amidase INQ56_16665 PF04122 Putative cell wall binding repeat 2 INQ56_16670 PF08486 Stage II sporulation protein INQ56_16670 PF04122 Putative cell wall binding repeat 2 INQ56_16680 PF03816 Cell envelope-related transcriptional attenuator domain INQ56_16685 PF02350 UDP-N-acetylglucosamine 2-epimerase INQ56_16690 PF00483 Nucleotidyl transferase INQ56_16700 PF00005 ABC transporter INQ56_16705 PF01061 ABC-2 type transporter INQ56_16710 PF00535 Glycosyl transferase family 2 INQ56_16720 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain INQ56_16720 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain INQ56_16720 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain INQ56_16745 PF01467 Cytidylyltransferase-like INQ56_16750 PF03808 Glycosyl transferase WecB/TagA/CpsF family INQ56_16755 PF04464 CDP-Glycerol:Poly(glycerophosphate) glycerophosphotransferase INQ56_16760 PF01832 Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase INQ56_16760 PF08239 Bacterial SH3 domain INQ56_16760 PF05036 Sporulation related domain INQ56_16770 PF01238 Phosphomannose isomerase type I INQ56_16775 PF00528 Binding-protein-dependent transport system inner membrane component INQ56_16780 PF00528 Binding-protein-dependent transport system inner membrane component INQ56_16785 PF01547 Bacterial extracellular solute-binding protein INQ56_16790 PF00196 Bacterial regulatory proteins, luxR family INQ56_16790 PF00072 Response regulator receiver domain INQ56_16795 PF02743 Cache domain INQ56_16795 PF00672 HAMP domain INQ56_16795 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase INQ56_16795 PF06580 Histidine kinase INQ56_16805 PF00583 Acetyltransferase (GNAT) family INQ56_16810 PF01081 KDPG and KHG aldolase INQ56_16815 PF00294 pfkB family carbohydrate kinase INQ56_16820 PF00356 Bacterial regulatory proteins, lacI family INQ56_16825 PF04962 KduI/IolB family INQ56_16835 PF03323 Bacillus/Clostridium GerA spore germination protein INQ56_16840 PF03845 Spore germination protein INQ56_16845 PF05504 Spore germination B3/ GerAC like, C-terminal INQ56_16850 PF00535 Glycosyl transferase family 2 INQ56_16850 PF00534 Glycosyl transferases group 1 INQ56_16855 PF00083 Sugar (and other) transporter INQ56_16860 PF03816 Cell envelope-related transcriptional attenuator domain INQ56_16870 PF00877 NlpC/P60 family INQ56_16880 PF09587 Bacterial capsule synthesis protein PGA_cap INQ56_16885 PF14102 Capsule biosynthesis CapC INQ56_16890 PF08245 Mur ligase middle domain INQ56_16895 PF03323 Bacillus/Clostridium GerA spore germination protein INQ56_16905 PF05504 Spore germination B3/ GerAC like, C-terminal INQ56_16910 PF00356 Bacterial regulatory proteins, lacI family INQ56_16915 PF00294 pfkB family carbohydrate kinase INQ56_16920 PF05025 RbsD / FucU transport protein family INQ56_16925 PF00005 ABC transporter INQ56_16930 PF02653 Branched-chain amino acid transport system / permease component INQ56_16935 PF13407 Periplasmic binding protein domain INQ56_16940 PF01613 Flavin reductase like domain INQ56_16945 PF03466 LysR substrate binding domain INQ56_16945 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family INQ56_16950 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain INQ56_16950 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain INQ56_16950 PF00205 Thiamine pyrophosphate enzyme, central domain INQ56_16955 PF03306 Alpha-acetolactate decarboxylase INQ56_16965 PF13404 AsnC-type helix-turn-helix domain INQ56_16965 PF01037 Lrp/AsnC ligand binding domain INQ56_16970 PF02417 Chromate transporter INQ56_16975 PF02417 Chromate transporter INQ56_16980 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain INQ56_16980 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain INQ56_16980 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain INQ56_16990 PF04434 SWIM zinc finger INQ56_16995 PF00176 SNF2 family N-terminal domain INQ56_16995 PF00271 Helicase conserved C-terminal domain INQ56_16995 PF12419 SNF2 Helicase protein INQ56_17000 PF01740 STAS domain INQ56_17000 PF13426 PAS domain INQ56_17015 PF14183 YwpF-like protein INQ56_17020 PF01741 Large-conductance mechanosensitive channel, MscL INQ56_17025 PF07977 FabA-like domain INQ56_17030 PF18801 response regulator aspartate phosphatase H, N terminal INQ56_17035 PF06429 Flagellar basal body rod FlgEFG protein C-terminal INQ56_17035 PF00460 Flagella basal body rod protein INQ56_17040 PF06429 Flagellar basal body rod FlgEFG protein C-terminal INQ56_17040 PF00460 Flagella basal body rod protein INQ56_17050 PF12116 Stage III sporulation protein D INQ56_17055 PF01047 MarR family INQ56_17060 PF07690 Major Facilitator Superfamily INQ56_17065 PF01569 PAP2 superfamily INQ56_17070 PF07690 Major Facilitator Superfamily INQ56_17075 PF00497 Bacterial extracellular solute-binding proteins, family 3 INQ56_17080 PF00528 Binding-protein-dependent transport system inner membrane component INQ56_17085 PF00005 ABC transporter INQ56_17090 PF00909 Ammonium Transporter Family INQ56_17095 PF00543 Nitrogen regulatory protein P-II INQ56_17100 PF01551 Peptidase family M23 INQ56_17105 PF00583 Acetyltransferase (GNAT) family INQ56_17115 PF00471 Ribosomal protein L33 INQ56_17120 PF07683 Cobalamin synthesis protein cobW C-terminal domain INQ56_17120 PF02492 CobW/HypB/UreG, nucleotide-binding domain INQ56_17125 PF00253 Ribosomal protein S14p/S29e INQ56_17130 PF04055 Radical SAM superfamily INQ56_17130 PF06463 Molybdenum Cofactor Synthesis C INQ56_17135 PF02634 FdhD/NarQ family INQ56_17140 PF07690 Major Facilitator Superfamily INQ56_17145 PF18364 Molybdopterin oxidoreductase N-terminal domain INQ56_17145 PF00384 Molybdopterin oxidoreductase INQ56_17145 PF01568 Molydopterin dinucleotide binding domain INQ56_17150 PF00092 von Willebrand factor type A domain INQ56_17155 PF00092 von Willebrand factor type A domain INQ56_17160 PF08486 Stage II sporulation protein INQ56_17165 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) INQ56_17170 PF08680 TATA-box binding INQ56_17175 PF06612 Protein of unknown function (DUF1146) INQ56_17185 PF02823 ATP synthase, Delta/Epsilon chain, beta-sandwich domain INQ56_17185 PF00401 ATP synthase, Delta/Epsilon chain, long alpha-helix domain INQ56_17190 PF02874 ATP synthase alpha/beta family, beta-barrel domain INQ56_17190 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain INQ56_17195 PF00231 ATP synthase INQ56_17200 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain INQ56_17200 PF00306 ATP synthase alpha/beta chain, C terminal domain INQ56_17200 PF02874 ATP synthase alpha/beta family, beta-barrel domain INQ56_17205 PF00213 ATP synthase delta (OSCP) subunit INQ56_17210 PF00430 ATP synthase B/B' CF(0) INQ56_17215 PF00137 ATP synthase subunit C INQ56_17220 PF00119 ATP synthase A chain INQ56_17225 PF03899 ATP synthase I chain INQ56_17235 PF00464 Serine hydroxymethyltransferase INQ56_17240 PF04260 Protein of unknown function (DUF436) INQ56_17245 PF02502 Ribose/Galactose Isomerase INQ56_17250 PF01451 Low molecular weight phosphotyrosine protein phosphatase INQ56_17255 PF02659 Putative manganese efflux pump INQ56_17260 PF03481 Putative GTP-binding controlling metal-binding INQ56_17260 PF01300 Telomere recombination INQ56_17270 PF09551 Stage II sporulation protein R (spore_II_R) INQ56_17280 PF05175 Methyltransferase small domain INQ56_17280 PF17827 PrmC N-terminal domain INQ56_17285 PF00472 RF-1 domain INQ56_17285 PF03462 PCRF domain INQ56_17290 PF13411 MerR HTH family regulatory protein INQ56_17295 PF03547 Membrane transport protein INQ56_17300 PF00390 Malic enzyme, N-terminal domain INQ56_17300 PF03949 Malic enzyme, NAD binding domain INQ56_17305 PF00265 Thymidine kinase INQ56_17310 PF01197 Ribosomal protein L31 INQ56_17315 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain INQ56_17315 PF07497 Rho termination factor, RNA-binding domain INQ56_17315 PF07498 Rho termination factor, N-terminal domain INQ56_17320 PF03320 Bacterial fructose-1,6-bisphosphatase, glpX-encoded INQ56_17325 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) INQ56_17330 PF00923 Transaldolase/Fructose-6-phosphate aldolase INQ56_17335 PF01116 Fructose-bisphosphate aldolase class-II INQ56_17340 PF00072 Response regulator receiver domain INQ56_17345 PF10740 Domain of unknown function (DUF2529) INQ56_17350 PF06418 CTP synthase N-terminus INQ56_17350 PF00117 Glutamine amidotransferase class-I INQ56_17355 PF05066 HB1, ASXL, restriction endonuclease HTH domain INQ56_17370 PF02770 Acyl-CoA dehydrogenase, middle domain INQ56_17370 PF00441 Acyl-CoA dehydrogenase, C-terminal domain INQ56_17370 PF02771 Acyl-CoA dehydrogenase, N-terminal domain INQ56_17375 PF02771 Acyl-CoA dehydrogenase, N-terminal domain INQ56_17375 PF02770 Acyl-CoA dehydrogenase, middle domain INQ56_17375 PF00441 Acyl-CoA dehydrogenase, C-terminal domain INQ56_17380 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain INQ56_17380 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain INQ56_17385 PF02803 Thiolase, C-terminal domain INQ56_17385 PF00108 Thiolase, N-terminal domain INQ56_17390 PF02754 Cysteine-rich domain INQ56_17390 PF13183 4Fe-4S dicluster domain INQ56_17395 PF13091 PLD-like domain INQ56_17400 PF03851 UV-endonuclease UvdE INQ56_17410 PF02016 LD-carboxypeptidase N-terminal domain INQ56_17410 PF17676 LD-carboxypeptidase C-terminal domain INQ56_17415 PF00664 ABC transporter transmembrane region INQ56_17415 PF00005 ABC transporter INQ56_17420 PF13396 Phospholipase_D-nuclease N-terminal INQ56_17420 PF13091 PLD-like domain INQ56_17425 PF02016 LD-carboxypeptidase N-terminal domain INQ56_17425 PF17676 LD-carboxypeptidase C-terminal domain INQ56_17440 PF00750 tRNA synthetases class I (R) INQ56_17440 PF05746 DALR anticodon binding domain INQ56_17440 PF03485 Arginyl tRNA synthetase N terminal domain INQ56_17445 PF09148 Domain of unknown function (DUF1934) INQ56_17455 PF00491 Arginase family INQ56_17460 PF17284 Spermidine synthase tetramerisation domain INQ56_17465 PF00912 Transglycosylase INQ56_17465 PF00905 Penicillin binding protein transpeptidase domain INQ56_17470 PF08741 YwhD family INQ56_17475 PF02163 Peptidase family M50 INQ56_17480 PF01361 Tautomerase enzyme INQ56_17490 PF00296 Luciferase-like monooxygenase INQ56_17495 PF03466 LysR substrate binding domain INQ56_17495 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family INQ56_17500 PF03358 NADPH-dependent FMN reductase INQ56_17505 PF00296 Luciferase-like monooxygenase INQ56_17510 PF00462 Glutaredoxin INQ56_17515 PF00583 Acetyltransferase (GNAT) family INQ56_17520 PF00528 Binding-protein-dependent transport system inner membrane component INQ56_17530 PF00528 Binding-protein-dependent transport system inner membrane component INQ56_17535 PF00005 ABC transporter INQ56_17545 PF01966 HD domain INQ56_17550 PF07293 Protein of unknown function (DUF1450) INQ56_17565 PF07238 PilZ domain INQ56_17565 PF00535 Glycosyl transferase family 2 INQ56_17575 PF03099 Biotin/lipoate A/B protein ligase family INQ56_17595 PF14449 Pre-toxin TG INQ56_17595 PF04740 LXG domain of WXG superfamily INQ56_17625 PF03737 Aldolase/RraA INQ56_17635 PF01515 Phosphate acetyl/butaryl transferase INQ56_17640 PF06778 Chlorite dismutase INQ56_17650 PF01037 Lrp/AsnC ligand binding domain INQ56_17655 PF07690 Major Facilitator Superfamily INQ56_17665 PF07883 Cupin domain INQ56_17680 PF00155 Aminotransferase class I and II INQ56_17690 PF00908 dTDP-4-dehydrorhamnose 3,5-epimerase INQ56_17695 PF04321 RmlD substrate binding domain INQ56_17700 PF16363 GDP-mannose 4,6 dehydratase INQ56_17705 PF00483 Nucleotidyl transferase INQ56_17710 PF04101 Glycosyltransferase family 28 C-terminal domain INQ56_17715 PF02348 Cytidylyltransferase INQ56_17720 PF08666 SAF domain INQ56_17720 PF03102 NeuB family INQ56_17725 PF00583 Acetyltransferase (GNAT) family INQ56_17730 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family INQ56_17735 PF04464 CDP-Glycerol:Poly(glycerophosphate) glycerophosphotransferase INQ56_17740 PF00535 Glycosyl transferase family 2 INQ56_17750 PF09671 Spore coat protein (Spore_GerQ) INQ56_17760 PF04241 Protein of unknown function (DUF423) INQ56_17765 PF00860 Permease family INQ56_17770 PF17261 Family of unknown function (DUF5327) INQ56_17775 PF00171 Aldehyde dehydrogenase family INQ56_17780 PF03167 Uracil DNA glycosylase superfamily INQ56_17785 PF00535 Glycosyl transferase family 2 INQ56_17795 PF08543 Phosphomethylpyrimidine kinase INQ56_17825 PF00251 Glycosyl hydrolases family 32 N-terminal domain INQ56_17825 PF08244 Glycosyl hydrolases family 32 C terminal INQ56_17830 PF02378 Phosphotransferase system, EIIC INQ56_17830 PF00367 phosphotransferase system, EIIB INQ56_17835 PF00874 PRD domain INQ56_17835 PF03123 CAT RNA binding domain INQ56_17845 PF05922 Peptidase inhibitor I9 INQ56_17845 PF02225 PA domain INQ56_17845 PF13860 FlgD Ig-like domain INQ56_17845 PF00082 Subtilase family INQ56_17855 PF00296 Luciferase-like monooxygenase INQ56_17860 PF00881 Nitroreductase family INQ56_17865 PF01098 Cell cycle protein INQ56_17870 PF17368 Spore morphogenesis and germination YwcE INQ56_17875 PF03626 Prokaryotic Cytochrome C oxidase subunit IV INQ56_17880 PF00510 Cytochrome c oxidase subunit III INQ56_17885 PF00115 Cytochrome C and Quinol oxidase polypeptide I INQ56_17890 PF02790 Cytochrome C oxidase subunit II, transmembrane domain INQ56_17890 PF00116 Cytochrome C oxidase subunit II, periplasmic domain INQ56_17900 PF01087 Galactose-1-phosphate uridyl transferase, N-terminal domain INQ56_17900 PF02744 Galactose-1-phosphate uridyl transferase, C-terminal domain INQ56_17905 PF16363 GDP-mannose 4,6 dehydratase INQ56_17910 PF10509 Galactokinase galactose-binding signature INQ56_17910 PF00288 GHMP kinases N terminal domain INQ56_17910 PF08544 GHMP kinases C terminal INQ56_17925 PF04138 GtrA-like protein INQ56_17950 PF13181 Tetratricopeptide repeat INQ56_17950 PF18801 response regulator aspartate phosphatase H, N terminal INQ56_17960 PF04341 Protein of unknown function, DUF485 INQ56_17965 PF00474 Sodium:solute symporter family INQ56_17980 PF02581 Thiamine monophosphate synthase INQ56_17985 PF02110 Hydroxyethylthiazole kinase family INQ56_17990 PF03466 LysR substrate binding domain INQ56_17990 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family INQ56_17995 PF03788 LrgA family INQ56_18000 PF04172 LrgB-like family INQ56_18005 PF10672 S-adenosylmethionine-dependent methyltransferase INQ56_18005 PF17785 PUA-like domain INQ56_18010 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily INQ56_18025 PF00005 ABC transporter INQ56_18030 PF00528 Binding-protein-dependent transport system inner membrane component INQ56_18035 PF00497 Bacterial extracellular solute-binding proteins, family 3 INQ56_18040 PF18801 response regulator aspartate phosphatase H, N terminal INQ56_18050 PF04607 Region found in RelA / SpoT proteins INQ56_18055 PF02653 Branched-chain amino acid transport system / permease component INQ56_18060 PF00005 ABC transporter INQ56_18065 PF13407 Periplasmic binding protein domain INQ56_18070 PF13229 Right handed beta helix region INQ56_18075 PF01063 Amino-transferase class IV INQ56_18085 PF11975 Family 4 glycosyl hydrolase C-terminal domain INQ56_18085 PF02056 Family 4 glycosyl hydrolase INQ56_18090 PF02255 PTS system, Lactose/Cellobiose specific IIA subunit INQ56_18095 PF02378 Phosphotransferase system, EIIC INQ56_18100 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit INQ56_18105 PF08279 HTH domain INQ56_18105 PF05043 Mga helix-turn-helix domain INQ56_18105 PF00874 PRD domain INQ56_18105 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 INQ56_18120 PF02812 Glu/Leu/Phe/Val dehydrogenase, dimerisation domain INQ56_18120 PF00208 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase INQ56_18135 PF04542 Sigma-70 region 2 INQ56_18135 PF08281 Sigma-70, region 4 INQ56_18140 PF00544 Pectate lyase INQ56_18145 PF00664 ABC transporter transmembrane region INQ56_18145 PF00005 ABC transporter INQ56_18150 PF00005 ABC transporter INQ56_18150 PF00664 ABC transporter transmembrane region INQ56_18155 PF02322 Cytochrome bd terminal oxidase subunit II INQ56_18160 PF01654 Cytochrome bd terminal oxidase subunit I INQ56_18165 PF00005 ABC transporter INQ56_18170 PF01032 FecCD transport family INQ56_18175 PF01497 Periplasmic binding protein INQ56_18180 PF04203 Sortase domain INQ56_18185 PF00005 ABC transporter INQ56_18190 PF01032 FecCD transport family INQ56_18195 PF01497 Periplasmic binding protein INQ56_18200 PF05031 Iron Transport-associated domain INQ56_18205 PF05031 Iron Transport-associated domain INQ56_18210 PF05031 Iron Transport-associated domain INQ56_18215 PF01638 HxlR-like helix-turn-helix INQ56_18220 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily INQ56_18225 PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase INQ56_18225 PF00925 GTP cyclohydrolase II INQ56_18230 PF01872 RibD C-terminal domain INQ56_18230 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region INQ56_18240 PF01522 Polysaccharide deacetylase INQ56_18245 PF02255 PTS system, Lactose/Cellobiose specific IIA subunit INQ56_18250 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit INQ56_18255 PF00232 Glycosyl hydrolase family 1 INQ56_18260 PF03786 D-mannonate dehydratase (UxuA) INQ56_18265 PF02378 Phosphotransferase system, EIIC INQ56_18270 PF00874 PRD domain INQ56_18270 PF05043 Mga helix-turn-helix domain INQ56_18270 PF08279 HTH domain INQ56_18270 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 INQ56_18295 PF03553 Na+/H+ antiporter family INQ56_18300 PF10415 Fumarase C C-terminus INQ56_18300 PF00206 Lyase INQ56_18305 PF17763 Glutaminase/Asparaginase C-terminal domain INQ56_18305 PF00710 Asparaginase, N-terminal INQ56_18310 PF01381 Helix-turn-helix INQ56_18320 PF17353 Family of unknown function (DUF5381) INQ56_18335 PF06013 Proteins of 100 residues with WXG INQ56_18340 PF01546 Peptidase family M20/M25/M40 INQ56_18340 PF07687 Peptidase dimerisation domain INQ56_18355 PF01418 Helix-turn-helix domain, rpiR family INQ56_18355 PF01380 SIS domain INQ56_18360 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase INQ56_18360 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase INQ56_18370 PF02447 GntP family permease INQ56_18375 PF01717 Cobalamin-independent synthase, Catalytic domain INQ56_18395 PF00232 Glycosyl hydrolase family 1 INQ56_18400 PF00367 phosphotransferase system, EIIB INQ56_18400 PF02378 Phosphotransferase system, EIIC INQ56_18400 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 INQ56_18405 PF00874 PRD domain INQ56_18405 PF03123 CAT RNA binding domain INQ56_18410 PF09234 Domain of unknown function (DUF1963) INQ56_18420 PF02361 Cobalt transport protein INQ56_18425 PF00005 ABC transporter INQ56_18430 PF09819 ABC-type cobalt transport system, permease component INQ56_18435 PF03070 TENA/THI-4/PQQC family INQ56_18465 PF05547 Immune inhibitor A peptidase M6 INQ56_18465 PF00801 PKD domain INQ56_18470 PF03992 Antibiotic biosynthesis monooxygenase INQ56_18475 PF00881 Nitroreductase family INQ56_18480 PF01047 MarR family INQ56_18485 PF07831 Pyrimidine nucleoside phosphorylase C-terminal domain INQ56_18485 PF02885 Glycosyl transferase family, helical bundle domain INQ56_18485 PF00591 Glycosyl transferase family, a/b domain INQ56_18490 PF01773 Na+ dependent nucleoside transporter N-terminus INQ56_18490 PF07662 Na+ dependent nucleoside transporter C-terminus INQ56_18495 PF01791 DeoC/LacD family aldolase INQ56_18500 PF04198 Putative sugar-binding domain INQ56_18510 PF01757 Acyltransferase family INQ56_18515 PF07690 Major Facilitator Superfamily INQ56_18520 PF05201 Glutamyl-tRNAGlu reductase, N-terminal domain INQ56_18520 PF00745 Glutamyl-tRNAGlu reductase, dimerisation domain INQ56_18520 PF01488 Shikimate / quinate 5-dehydrogenase INQ56_18525 PF13649 Methyltransferase domain INQ56_18530 PF00196 Bacterial regulatory proteins, luxR family INQ56_18530 PF00072 Response regulator receiver domain INQ56_18540 PF13411 MerR HTH family regulatory protein INQ56_18545 PF01408 Oxidoreductase family, NAD-binding Rossmann fold INQ56_18550 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain INQ56_18555 PF00324 Amino acid permease INQ56_18560 PF08713 DNA alkylation repair enzyme INQ56_18565 PF02447 GntP family permease INQ56_18570 PF00370 FGGY family of carbohydrate kinases, N-terminal domain INQ56_18570 PF02782 FGGY family of carbohydrate kinases, C-terminal domain INQ56_18575 PF01380 SIS domain INQ56_18575 PF01418 Helix-turn-helix domain, rpiR family INQ56_18580 PF01156 Inosine-uridine preferring nucleoside hydrolase INQ56_18615 PF03466 LysR substrate binding domain INQ56_18615 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family INQ56_18620 PF00356 Bacterial regulatory proteins, lacI family INQ56_18625 PF13416 Bacterial extracellular solute-binding protein INQ56_18630 PF00528 Binding-protein-dependent transport system inner membrane component INQ56_18635 PF00528 Binding-protein-dependent transport system inner membrane component INQ56_18640 PF07745 Glycosyl hydrolase family 53 INQ56_18645 PF08532 Beta-galactosidase trimerisation domain INQ56_18645 PF08533 Beta-galactosidase C-terminal domain INQ56_18645 PF02449 Beta-galactosidase INQ56_18665 PF00005 ABC transporter INQ56_18680 PF03600 Citrate transporter INQ56_18690 PF12679 ABC-2 family transporter protein INQ56_18695 PF00005 ABC transporter INQ56_18700 PF03831 PhnA domain INQ56_18700 PF08274 PhnA Zinc-Ribbon INQ56_18705 PF02595 Glycerate kinase family INQ56_18710 PF02447 GntP family permease INQ56_18715 PF13556 PucR C-terminal helix-turn-helix domain INQ56_18715 PF05651 Putative sugar diacid recognition INQ56_18715 PF17853 GGDEF-like domain INQ56_18720 PF17922 Tetracyclin repressor-like, C-terminal domain INQ56_18720 PF00440 Bacterial regulatory proteins, tetR family INQ56_18725 PF07690 Major Facilitator Superfamily INQ56_18735 PF00005 ABC transporter INQ56_18740 PF18801 response regulator aspartate phosphatase H, N terminal INQ56_18745 PF00874 PRD domain INQ56_18745 PF03123 CAT RNA binding domain INQ56_18750 PF00232 Glycosyl hydrolase family 1 INQ56_18755 PF02378 Phosphotransferase system, EIIC INQ56_18755 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 INQ56_18755 PF00367 phosphotransferase system, EIIB INQ56_18780 PF00293 NUDIX domain INQ56_18795 PF00324 Amino acid permease INQ56_18800 PF00356 Bacterial regulatory proteins, lacI family INQ56_18805 PF07690 Major Facilitator Superfamily INQ56_18810 PF18317 Shikimate 5'-dehydrogenase C-terminal domain INQ56_18810 PF08501 Shikimate dehydrogenase substrate binding domain INQ56_18815 PF07690 Major Facilitator Superfamily INQ56_18830 PF14410 HNH/ENDO VII superfamily nuclease with conserved GHE residues INQ56_18830 PF04740 LXG domain of WXG superfamily INQ56_18830 PF14449 Pre-toxin TG INQ56_18845 PF00232 Glycosyl hydrolase family 1 INQ56_18850 PF02378 Phosphotransferase system, EIIC INQ56_18850 PF00367 phosphotransferase system, EIIB INQ56_18850 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 INQ56_18855 PF07702 UTRA domain INQ56_18855 PF00392 Bacterial regulatory proteins, gntR family INQ56_18865 PF02567 Phenazine biosynthesis-like protein INQ56_18870 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family INQ56_18870 PF03466 LysR substrate binding domain INQ56_18890 PF00027 Cyclic nucleotide-binding domain INQ56_18890 PF13545 Crp-like helix-turn-helix domain INQ56_18895 PF00672 HAMP domain INQ56_18895 PF00512 His Kinase A (phospho-acceptor) domain INQ56_18895 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase INQ56_18900 PF00486 Transcriptional regulatory protein, C terminal INQ56_18900 PF00072 Response regulator receiver domain INQ56_18905 PF12823 Domain of unknown function (DUF3817) INQ56_18905 PF03176 MMPL family INQ56_18910 PF16123 Hydroxyacylglutathione hydrolase C-terminus INQ56_18910 PF00753 Metallo-beta-lactamase superfamily INQ56_18930 PF02590 Predicted SPOUT methyltransferase INQ56_18935 PF14116 YyzF-like protein INQ56_18940 PF02361 Cobalt transport protein INQ56_18945 PF12558 ATP-binding cassette cobalt transporter INQ56_18945 PF00005 ABC transporter INQ56_18950 PF07155 ECF-type riboflavin transporter, S component INQ56_18965 PF00005 ABC transporter INQ56_18970 PF00583 Acetyltransferase (GNAT) family INQ56_18975 PF13180 PDZ domain INQ56_18980 PF00753 Metallo-beta-lactamase superfamily INQ56_18985 PF09648 YycH protein INQ56_18990 PF07435 YycH protein INQ56_18995 PF13426 PAS domain INQ56_18995 PF00512 His Kinase A (phospho-acceptor) domain INQ56_18995 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase INQ56_18995 PF00672 HAMP domain INQ56_19000 PF00072 Response regulator receiver domain INQ56_19000 PF00486 Transcriptional regulatory protein, C terminal INQ56_19025 PF00578 AhpC/TSA family INQ56_19035 PF04235 Protein of unknown function (DUF418) INQ56_19040 PF00709 Adenylosuccinate synthetase INQ56_19045 PF00440 Bacterial regulatory proteins, tetR family INQ56_19050 PF00067 Cytochrome P450 INQ56_19055 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily INQ56_19060 PF00772 DnaB-like helicase N terminal domain INQ56_19060 PF03796 DnaB-like helicase C terminal domain INQ56_19065 PF16226 Domain of unknown function (DUF4885) INQ56_19075 PF00756 Putative esterase INQ56_19080 PF00106 short chain dehydrogenase INQ56_19085 PF00425 chorismate binding enzyme INQ56_19090 PF00501 AMP-binding enzyme INQ56_19090 PF13193 AMP-binding enzyme C-terminal domain INQ56_19095 PF00857 Isochorismatase family INQ56_19095 PF00550 Phosphopantetheine attachment site INQ56_19100 PF00550 Phosphopantetheine attachment site INQ56_19100 PF13193 AMP-binding enzyme C-terminal domain INQ56_19100 PF00975 Thioesterase domain INQ56_19100 PF00501 AMP-binding enzyme INQ56_19100 PF00668 Condensation domain INQ56_19105 PF03621 MbtH-like protein INQ56_19110 PF12833 Helix-turn-helix domain INQ56_19110 PF01497 Periplasmic binding protein INQ56_19115 PF01497 Periplasmic binding protein INQ56_19120 PF00756 Putative esterase INQ56_19125 PF14174 YycC-like protein INQ56_19130 PF07690 Major Facilitator Superfamily INQ56_19135 PF01281 Ribosomal protein L9, N-terminal domain INQ56_19135 PF03948 Ribosomal protein L9, C-terminal domain INQ56_19140 PF01368 DHH family INQ56_19140 PF02272 DHHA1 domain INQ56_19145 PF09991 Predicted membrane protein (DUF2232) INQ56_19150 PF01368 DHH family INQ56_19150 PF02833 DHHA2 domain INQ56_19155 PF13739 Deacetylase PdaC INQ56_19155 PF11738 Protein of unknown function (DUF3298) INQ56_19160 PF04542 Sigma-70 region 2 INQ56_19160 PF08281 Sigma-70, region 4 INQ56_19170 PF00199 Catalase INQ56_19170 PF06628 Catalase-related immune-responsive INQ56_19175 PF03358 NADPH-dependent FMN reductase INQ56_19180 PF01738 Dienelactone hydrolase family INQ56_19185 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily INQ56_19190 PF00528 Binding-protein-dependent transport system inner membrane component INQ56_19195 PF00005 ABC transporter INQ56_19195 PF00571 CBS domain INQ56_19200 PF01084 Ribosomal protein S18 INQ56_19205 PF00436 Single-strand binding protein family INQ56_19210 PF01250 Ribosomal protein S6 INQ56_19215 PF06071 Protein of unknown function (DUF933) INQ56_19215 PF01926 50S ribosome-binding GTPase INQ56_19220 PF06107 Bacterial protein of unknown function (DUF951) INQ56_19240 PF06866 Protein of unknown function (DUF1256) INQ56_19245 PF02195 ParB-like nuclease domain INQ56_19245 PF17762 HTH domain found in ParB protein INQ56_19250 PF13614 AAA domain INQ56_19260 PF02195 ParB-like nuclease domain INQ56_19260 PF17762 HTH domain found in ParB protein INQ56_19265 PF02527 rRNA small subunit methyltransferase G INQ56_19270 PF01134 Glucose inhibited division protein A INQ56_19270 PF13932 GidA associated domain INQ56_19275 PF10396 GTP-binding protein TrmE N-terminus INQ56_19275 PF01926 50S ribosome-binding GTPase INQ56_19275 PF12631 MnmE helical domain INQ56_19280 PF14804 Jag N-terminus INQ56_19280 PF01424 R3H domain INQ56_19285 PF02096 60Kd inner membrane protein INQ56_19290 PF00825 Ribonuclease P INQ56_19295 PF00468 Ribosomal protein L34