locus-tag class description NC3_00010 PF00308 Bacterial dnaA protein NC3_00010 PF08299 Bacterial dnaA protein helix-turn-helix NC3_00010 PF11638 DnaA N-terminal domain NC3_00020 PF00712 DNA polymerase III beta subunit, N-terminal domain NC3_00020 PF02767 DNA polymerase III beta subunit, central domain NC3_00020 PF02768 DNA polymerase III beta subunit, C-terminal domain NC3_00040 PF02463 RecF/RecN/SMC N terminal domain NC3_00050 PF04025 Domain of unknown function (DUF370) NC3_00060 PF01751 Toprim domain NC3_00060 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase NC3_00060 PF00204 DNA gyrase B NC3_00060 PF00986 DNA gyrase B subunit, carboxyl terminus NC3_00070 PF03989 DNA gyrase C-terminal domain, beta-propeller NC3_00070 PF00521 DNA gyrase/topoisomerase IV, subunit A NC3_00080 PF14175 YaaC-like Protein NC3_00090 PF00571 CBS domain NC3_00090 PF00478 IMP dehydrogenase / GMP reductase domain NC3_00100 PF07943 Penicillin-binding protein 5, C-terminal domain NC3_00100 PF00768 D-alanyl-D-alanine carboxypeptidase NC3_00110 PF00392 Bacterial regulatory proteins, gntR family NC3_00110 PF00155 Aminotransferase class I and II NC3_00120 PF01680 SOR/SNZ family NC3_00130 PF01174 SNO glutamine amidotransferase family NC3_00140 PF02403 Seryl-tRNA synthetase N-terminal domain NC3_00140 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) NC3_00150 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain NC3_00160 PF01712 Deoxynucleoside kinase NC3_00170 PF01712 Deoxynucleoside kinase NC3_00180 PF00704 Glycosyl hydrolases family 18 NC3_00180 PF01476 LysM domain NC3_00190 PF00857 Isochorismatase family NC3_00200 PF14437 MafB19-like deaminase NC3_00210 PF12169 DNA polymerase III subunits gamma and tau domain III NC3_00220 PF02575 YbaB/EbfC DNA-binding family NC3_00230 PF02132 RecR protein NC3_00230 PF13662 Toprim domain NC3_00240 PF10704 Protein of unknown function (DUF2508) NC3_00250 PF07441 SigmaK-factor processing regulatory protein BofA NC3_00260 PF10764 Inhibitor of sigma-G Gin NC3_00270 PF10112 5-bromo-4-chloroindolyl phosphate hydrolysis protein NC3_00280 PF05816 Toxic anion resistance protein (TelA) NC3_00290 PF01276 Orn/Lys/Arg decarboxylase, major domain NC3_00290 PF03711 Orn/Lys/Arg decarboxylase, C-terminal domain NC3_00300 PF02223 Thymidylate kinase NC3_00310 PF06153 Cyclic-di-AMP receptor NC3_00320 PF03885 Protein of unknown function (DUF327) NC3_00330 PF09115 DNA polymerase III, delta subunit, C terminal NC3_00340 PF04468 PSP1 C-terminal conserved region NC3_00350 PF06156 Initiation control protein YabA NC3_00360 PF05175 Methyltransferase small domain NC3_00370 PF01541 GIY-YIG catalytic domain NC3_00380 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases NC3_00390 PF18277 AbrB C-terminal domain NC3_00390 PF04014 Antidote-toxin recognition MazE, bacterial antitoxin NC3_00400 PF09334 tRNA synthetases class I (M) NC3_00400 PF08264 Anticodon-binding domain of tRNA NC3_00400 PF01588 Putative tRNA binding domain NC3_00410 PF01026 TatD related DNase NC3_00420 PF06725 3D domain NC3_00420 PF03990 G5-linked-Ubiquitin-like domain NC3_00420 PF07501 G5 domain NC3_00430 PF13331 Domain of unknown function (DUF4093) NC3_00430 PF13662 Toprim domain NC3_00440 PF00398 Ribosomal RNA adenine dimethylase NC3_00450 PF05582 YabG peptidase U57 NC3_00460 PF06257 Biofilm formation stimulator VEG NC3_00470 PF00269 Small, acid-soluble spore proteins, alpha/beta type NC3_00480 PF00288 GHMP kinases N terminal domain NC3_00480 PF08544 GHMP kinases C terminal NC3_00490 PF00156 Phosphoribosyl transferase domain NC3_00490 PF09182 Bacterial purine repressor, N-terminal NC3_00500 PF01042 Endoribonuclease L-PSP NC3_00510 PF04026 SpoVG NC3_00520 PF00132 Bacterial transferase hexapeptide (six repeats) NC3_00520 PF00483 Nucleotidyl transferase NC3_00530 PF14572 Phosphoribosyl synthetase-associated domain NC3_00530 PF13793 N-terminal domain of ribose phosphate pyrophosphokinase NC3_00540 PF01386 Ribosomal L25p family NC3_00540 PF14693 Ribosomal protein TL5, C-terminal domain NC3_00550 PF01195 Peptidyl-tRNA hydrolase NC3_00560 PF10955 Protein of unknown function (DUF2757) NC3_00570 PF02559 CarD-like/TRCF domain NC3_00570 PF00270 DEAD/DEAH box helicase NC3_00570 PF00271 Helicase conserved C-terminal domain NC3_00570 PF03461 TRCF domain NC3_00570 PF17757 UvrB interaction domain NC3_00580 PF04014 Antidote-toxin recognition MazE, bacterial antitoxin NC3_00580 PF15714 Stage V sporulation protein T C-terminal, transcription factor NC3_00590 PF14667 Polysaccharide biosynthesis C-terminal domain NC3_00590 PF01943 Polysaccharide biosynthesis protein NC3_00600 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases NC3_00600 PF03819 MazG nucleotide pyrophosphohydrolase domain NC3_00610 PF01479 S4 domain NC3_00620 PF07873 YabP family NC3_00630 PF09578 Spore cortex protein YabQ (Spore_YabQ) NC3_00640 PF04977 Septum formation initiator NC3_00650 PF00575 S1 RNA binding domain NC3_00660 PF07228 Stage II sporulation protein E (SpoIIE) NC3_00670 PF00092 von Willebrand factor type A domain NC3_00680 PF00069 Protein kinase domain NC3_00690 PF01171 PP-loop family NC3_00690 PF09179 TilS substrate binding domain NC3_00690 PF11734 TilS substrate C-terminal domain NC3_00700 PF00156 Phosphoribosyl transferase domain NC3_00710 PF06480 FtsH Extracellular NC3_00710 PF01434 Peptidase family M41 NC3_00710 PF00004 ATPase family associated with various cellular activities (AAA) NC3_00710 PF17862 AAA+ lid domain NC3_00720 PF03309 Type III pantothenate kinase NC3_00730 PF01430 Hsp33 protein NC3_00740 PF13145 PPIC-type PPIASE domain NC3_00750 PF00291 Pyridoxal-phosphate dependent enzyme NC3_00760 PF00425 chorismate binding enzyme NC3_00760 PF04715 Anthranilate synthase component I, N terminal region NC3_00770 PF00117 Glutamine amidotransferase class-I NC3_00780 PF01063 Amino-transferase class IV NC3_00790 PF00809 Pterin binding enzyme NC3_00800 PF02152 Dihydroneopterin aldolase NC3_00810 PF01288 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK) NC3_00820 PF01381 Helix-turn-helix NC3_00830 PF01207 Dihydrouridine synthase (Dus) NC3_00840 PF00152 tRNA synthetases class II (D, K and N) NC3_00840 PF01336 OB-fold nucleic acid binding domain NC3_00850 PF05848 CtsR N-terminal HTH domain NC3_00850 PF17727 CtsR C-terminal dimerization domain NC3_00860 PF02151 UvrB/uvrC motif NC3_00870 PF00217 ATP:guanido phosphotransferase, C-terminal catalytic domain NC3_00880 PF10431 C-terminal, D2-small domain, of ClpB protein NC3_00880 PF02861 Clp amino terminal domain, pathogenicity island component NC3_00880 PF17871 AAA lid domain NC3_00880 PF00004 ATPase family associated with various cellular activities (AAA) NC3_00880 PF07724 AAA domain (Cdc48 subfamily) NC3_00890 PF18073 Rubredoxin metal binding domain NC3_00900 PF02457 DisA bacterial checkpoint controller nucleotide-binding NC3_00900 PF10635 DisA bacterial checkpoint controller linker region NC3_00920 PF01128 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase NC3_00930 PF02542 YgbB family NC3_00940 PF00749 tRNA synthetases class I (E and Q), catalytic domain NC3_00950 PF00132 Bacterial transferase hexapeptide (six repeats) NC3_00950 PF06426 Serine acetyltransferase, N-terminal NC3_00960 PF01406 tRNA synthetases class I (C) catalytic domain NC3_00960 PF09190 DALR domain NC3_00970 PF00636 Ribonuclease III domain NC3_00980 PF00588 SpoU rRNA Methylase family NC3_00980 PF08032 RNA 2'-O ribose methyltransferase substrate binding NC3_00990 PF05991 YacP-like NYN domain NC3_01000 PF04542 Sigma-70 region 2 NC3_01000 PF08281 Sigma-70, region 4 NC3_01010 PF00584 SecE/Sec61-gamma subunits of protein translocation complex NC3_01020 PF00467 KOW motif NC3_01020 PF02357 Transcription termination factor nusG NC3_01030 PF03946 Ribosomal protein L11, N-terminal domain NC3_01030 PF00298 Ribosomal protein L11, RNA binding domain NC3_01040 PF00687 Ribosomal protein L1p/L10e family NC3_01050 PF00466 Ribosomal protein L10 NC3_01060 PF00542 Ribosomal protein L7/L12 C-terminal domain NC3_01060 PF16320 Ribosomal protein L7/L12 dimerisation domain NC3_01070 PF05175 Methyltransferase small domain NC3_01080 PF04565 RNA polymerase Rpb2, domain 3 NC3_01080 PF04560 RNA polymerase Rpb2, domain 7 NC3_01080 PF04563 RNA polymerase beta subunit NC3_01080 PF04561 RNA polymerase Rpb2, domain 2 NC3_01080 PF00562 RNA polymerase Rpb2, domain 6 NC3_01080 PF10385 RNA polymerase beta subunit external 1 domain NC3_01090 PF04983 RNA polymerase Rpb1, domain 3 NC3_01090 PF04998 RNA polymerase Rpb1, domain 5 NC3_01090 PF05000 RNA polymerase Rpb1, domain 4 NC3_01090 PF04997 RNA polymerase Rpb1, domain 1 NC3_01090 PF00623 RNA polymerase Rpb1, domain 2 NC3_01100 PF01248 Ribosomal protein L7Ae/L30e/S12e/Gadd45 family NC3_01110 PF00164 Ribosomal protein S12/S23 NC3_01120 PF00177 Ribosomal protein S7p/S5e NC3_01130 PF03144 Elongation factor Tu domain 2 NC3_01130 PF00009 Elongation factor Tu GTP binding domain NC3_01130 PF14492 Elongation Factor G, domain II NC3_01130 PF03764 Elongation factor G, domain IV NC3_01130 PF00679 Elongation factor G C-terminus NC3_01140 PF00009 Elongation factor Tu GTP binding domain NC3_01140 PF03144 Elongation factor Tu domain 2 NC3_01140 PF03143 Elongation factor Tu C-terminal domain NC3_01150 PF12146 Serine aminopeptidase, S33 NC3_01160 PF00338 Ribosomal protein S10p/S20e NC3_01170 PF00297 Ribosomal protein L3 NC3_01180 PF00573 Ribosomal protein L4/L1 family NC3_01190 PF00276 Ribosomal protein L23 NC3_01200 PF03947 Ribosomal Proteins L2, C-terminal domain NC3_01200 PF00181 Ribosomal Proteins L2, RNA binding domain NC3_01210 PF00203 Ribosomal protein S19 NC3_01220 PF00237 Ribosomal protein L22p/L17e NC3_01230 PF07650 KH domain NC3_01230 PF00189 Ribosomal protein S3, C-terminal domain NC3_01240 PF00252 Ribosomal protein L16p/L10e NC3_01250 PF00831 Ribosomal L29 protein NC3_01260 PF00366 Ribosomal protein S17 NC3_01270 PF00238 Ribosomal protein L14p/L23e NC3_01280 PF00467 KOW motif NC3_01280 PF17136 Ribosomal proteins 50S L24/mitochondrial 39S L24 NC3_01290 PF00281 Ribosomal protein L5 NC3_01290 PF00673 ribosomal L5P family C-terminus NC3_01300 PF00253 Ribosomal protein S14p/S29e NC3_01310 PF00410 Ribosomal protein S8 NC3_01320 PF00347 Ribosomal protein L6 NC3_01330 PF00861 Ribosomal L18 of archaea, bacteria, mitoch. and chloroplast NC3_01340 PF00333 Ribosomal protein S5, N-terminal domain NC3_01340 PF03719 Ribosomal protein S5, C-terminal domain NC3_01350 PF00327 Ribosomal protein L30p/L7e NC3_01360 PF00828 Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27A NC3_01370 PF00344 SecY translocase NC3_01380 PF05191 Adenylate kinase, active site lid NC3_01390 PF00557 Metallopeptidase family M24 NC3_01400 PF01176 Translation initiation factor 1A / IF-1 NC3_01410 PF00444 Ribosomal protein L36 NC3_01420 PF00416 Ribosomal protein S13/S18 NC3_01430 PF00411 Ribosomal protein S11 NC3_01440 PF01000 RNA polymerase Rpb3/RpoA insert domain NC3_01440 PF03118 Bacterial RNA polymerase, alpha chain C terminal domain NC3_01440 PF01193 RNA polymerase Rpb3/Rpb11 dimerisation domain NC3_01450 PF01196 Ribosomal protein L17 NC3_01460 PF00005 ABC transporter NC3_01470 PF00005 ABC transporter NC3_01480 PF02361 Cobalt transport protein NC3_01490 PF01416 tRNA pseudouridine synthase NC3_01500 PF00572 Ribosomal protein L13 NC3_01510 PF00380 Ribosomal protein S9/S16 NC3_01560 PF13302 Acetyltransferase (GNAT) domain NC3_01610 PF10730 Protein of unknown function (DUF2521) NC3_01620 PF01520 N-acetylmuramoyl-L-alanine amidase NC3_01630 PF10609 NUBPL iron-transfer P-loop NTPase NC3_01640 PF17898 Spore germination GerD central core domain NC3_01650 PF14089 KinB-signalling pathway activation in sporulation NC3_01660 PF01522 Polysaccharide deacetylase NC3_01690 PF00669 Bacterial flagellin N-terminal helical region NC3_01690 PF00700 Bacterial flagellin C-terminal helical region NC3_01700 PF01740 STAS domain NC3_01700 PF00916 Sulfate permease family NC3_01710 PF01758 Sodium Bile acid symporter family NC3_01720 PF07075 Protein of unknown function (DUF1343) NC3_01730 PF00933 Glycosyl hydrolase family 3 N terminal domain NC3_01730 PF01915 Glycosyl hydrolase family 3 C-terminal domain NC3_01740 PF00144 Beta-lactamase NC3_01750 PF02378 Phosphotransferase system, EIIC NC3_01750 PF00367 phosphotransferase system, EIIB NC3_01760 PF01380 SIS domain NC3_01760 PF01418 Helix-turn-helix domain, rpiR family NC3_01770 PF13580 SIS domain NC3_01780 PF00491 Arginase family NC3_01790 PF04542 Sigma-70 region 2 NC3_01790 PF08281 Sigma-70, region 4 NC3_01800 PF13490 Putative zinc-finger NC3_01810 PF02457 DisA bacterial checkpoint controller nucleotide-binding NC3_01820 PF07949 YbbR-like protein NC3_01830 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II NC3_01830 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain NC3_01830 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I NC3_01830 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III NC3_01840 PF01380 SIS domain NC3_01920 PF00005 ABC transporter NC3_01920 PF13732 Domain of unknown function (DUF4162) NC3_01940 PF00005 ABC transporter NC3_01950 PF00005 ABC transporter NC3_01950 PF12704 MacB-like periplasmic core domain NC3_01950 PF02687 FtsX-like permease family NC3_01960 PF03551 Transcriptional regulator PadR-like family NC3_01960 PF10400 Virulence activator alpha C-term NC3_01980 PF00005 ABC transporter NC3_02010 PF13905 Thioredoxin-like NC3_02030 PF04235 Protein of unknown function (DUF418) NC3_02050 PF00005 ABC transporter NC3_02070 PF01381 Helix-turn-helix NC3_02090 PF00561 alpha/beta hydrolase fold NC3_02100 PF12833 Helix-turn-helix domain NC3_02110 PF17922 Tetracyclin repressor-like, C-terminal domain NC3_02110 PF00440 Bacterial regulatory proteins, tetR family NC3_02140 PF00324 Amino acid permease NC3_02150 PF03009 Glycerophosphoryl diester phosphodiesterase family NC3_02160 PF07690 Major Facilitator Superfamily NC3_02180 PF03190 Protein of unknown function, DUF255 NC3_02230 PF02583 Metal-sensitive transcriptional repressor NC3_02240 PF13686 DsrE/DsrF/DrsH-like family NC3_02260 PF00581 Rhodanese-like domain NC3_02260 PF01206 Sulfurtransferase TusA NC3_02270 PF00753 Metallo-beta-lactamase superfamily NC3_02270 PF00581 Rhodanese-like domain NC3_02280 PF01206 Sulfurtransferase TusA NC3_02290 PF01925 Sulfite exporter TauE/SafE NC3_02310 PF09180 Prolyl-tRNA synthetase, C-terminal NC3_02310 PF03129 Anticodon binding domain NC3_02310 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) NC3_02320 PF07690 Major Facilitator Superfamily NC3_02350 PF01047 MarR family NC3_02360 PF04463 Protein of unknown function (DUF523) NC3_02380 PF00248 Aldo/keto reductase family NC3_02390 PF00465 Iron-containing alcohol dehydrogenase NC3_02400 PF00581 Rhodanese-like domain NC3_02400 PF17773 UPF0176 acylphosphatase like domain NC3_02400 PF12368 Rhodanase C-terminal NC3_02410 PF13520 Amino acid permease NC3_02430 PF03123 CAT RNA binding domain NC3_02430 PF00874 PRD domain NC3_02440 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 NC3_02440 PF00367 phosphotransferase system, EIIB NC3_02440 PF02378 Phosphotransferase system, EIIC NC3_02450 PF00232 Glycosyl hydrolase family 1 NC3_02480 PF00874 PRD domain NC3_02480 PF05043 Mga helix-turn-helix domain NC3_02480 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 NC3_02480 PF08279 HTH domain NC3_02490 PF00480 ROK family NC3_02500 PF09261 Alpha mannosidase middle domain NC3_02500 PF07748 Glycosyl hydrolases family 38 C-terminal domain NC3_02500 PF01074 Glycosyl hydrolases family 38 N-terminal domain NC3_02520 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit NC3_02530 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 NC3_02530 PF00381 PTS HPr component phosphorylation site NC3_02540 PF00082 Subtilase family NC3_02540 PF17936 Bacterial Ig domain NC3_02570 PF00324 Amino acid permease NC3_02580 PF02574 Homocysteine S-methyltransferase NC3_02590 PF02588 Uncharacterised 5xTM membrane BCR, YitT family COG1284 NC3_02590 PF10035 Uncharacterized protein conserved in bacteria (DUF2179) NC3_02600 PF03551 Transcriptional regulator PadR-like family NC3_02630 PF07690 Major Facilitator Superfamily NC3_02640 PF00583 Acetyltransferase (GNAT) family NC3_02670 PF00082 Subtilase family NC3_02680 PF01425 Amidase NC3_02690 PF00440 Bacterial regulatory proteins, tetR family NC3_02700 PF07883 Cupin domain NC3_02710 PF08240 Alcohol dehydrogenase GroES-like domain NC3_02710 PF00107 Zinc-binding dehydrogenase NC3_02710 PF13823 Alcohol dehydrogenase GroES-associated NC3_02720 PF01047 MarR family NC3_02730 PF13193 AMP-binding enzyme C-terminal domain NC3_02730 PF00501 AMP-binding enzyme NC3_02740 PF13520 Amino acid permease NC3_02760 PF00561 alpha/beta hydrolase fold NC3_02770 PF01235 Sodium:alanine symporter family NC3_02780 PF04960 Glutaminase NC3_02790 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase NC3_02800 PF08664 YcbB domain NC3_02800 PF00072 Response regulator receiver domain NC3_02810 PF05225 helix-turn-helix, Psq domain NC3_02810 PF02810 SEC-C motif NC3_02820 PF11611 Domain of unknown function (DUF4352) NC3_02820 PF17118 Domain of unknown function (DUF5105) NC3_02830 PF00248 Aldo/keto reductase family NC3_02840 PF14501 GHKL domain NC3_02850 PF00072 Response regulator receiver domain NC3_02850 PF04397 LytTr DNA-binding domain NC3_02860 PF00005 ABC transporter NC3_02870 PF12679 ABC-2 family transporter protein NC3_02910 PF11611 Domain of unknown function (DUF4352) NC3_02910 PF17118 Domain of unknown function (DUF5105) NC3_02920 PF07486 Cell Wall Hydrolase NC3_02950 PF00296 Luciferase-like monooxygenase NC3_02960 PF02342 TerD domain NC3_02970 PF02342 TerD domain NC3_02980 PF02342 TerD domain NC3_02990 PF03741 Integral membrane protein TerC family NC3_03040 PF14266 Putative component of 'biosynthetic module' NC3_03050 PF05816 Toxic anion resistance protein (TelA) NC3_03060 PF00571 CBS domain NC3_03060 PF00005 ABC transporter NC3_03070 PF00528 Binding-protein-dependent transport system inner membrane component NC3_03080 PF04069 Substrate binding domain of ABC-type glycine betaine transport system NC3_03110 PF07687 Peptidase dimerisation domain NC3_03110 PF01546 Peptidase family M20/M25/M40 NC3_03120 PF03606 C4-dicarboxylate anaerobic carrier NC3_03130 PF00056 lactate/malate dehydrogenase, NAD binding domain NC3_03130 PF02866 lactate/malate dehydrogenase, alpha/beta C-terminal domain NC3_03140 PF02652 L-lactate permease NC3_03150 PF00356 Bacterial regulatory proteins, lacI family NC3_03160 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family NC3_03170 PF05116 Sucrose-6F-phosphate phosphohydrolase NC3_03180 PF02894 Oxidoreductase family, C-terminal alpha/beta domain NC3_03180 PF01408 Oxidoreductase family, NAD-binding Rossmann fold NC3_03190 PF07690 Major Facilitator Superfamily NC3_03200 PF01810 LysE type translocator NC3_03220 PF08892 YqcI/YcgG family NC3_03230 PF00324 Amino acid permease NC3_03240 PF09347 Domain of unknown function (DUF1989) NC3_03250 PF02540 NAD synthase NC3_03270 PF00171 Aldehyde dehydrogenase family NC3_03280 PF01487 Type I 3-dehydroquinase NC3_03290 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain NC3_03290 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain NC3_03290 PF00205 Thiamine pyrophosphate enzyme, central domain NC3_03310 PF02515 CoA-transferase family III NC3_03320 PF07690 Major Facilitator Superfamily NC3_03340 PF09339 IclR helix-turn-helix domain NC3_03340 PF01614 Bacterial transcriptional regulator NC3_03350 PF01202 Shikimate kinase NC3_03360 PF08241 Methyltransferase domain NC3_03370 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family NC3_03370 PF03466 LysR substrate binding domain NC3_03380 PF00795 Carbon-nitrogen hydrolase NC3_03390 PF05448 Acetyl xylan esterase (AXE1) NC3_03410 PF10127 RNA repair pathway DNA polymerase beta family NC3_03420 PF01619 Proline dehydrogenase NC3_03430 PF00171 Aldehyde dehydrogenase family NC3_03440 PF13556 PucR C-terminal helix-turn-helix domain NC3_03440 PF17853 GGDEF-like domain NC3_03450 PF02040 Arsenical pump membrane protein NC3_03460 PF00528 Binding-protein-dependent transport system inner membrane component NC3_03470 PF00497 Bacterial extracellular solute-binding proteins, family 3 NC3_03490 PF10925 Protein of unknown function (DUF2680) NC3_03500 PF12706 Beta-lactamase superfamily domain NC3_03510 PF01037 Lrp/AsnC ligand binding domain NC3_03520 PF02522 Aminoglycoside 3-N-acetyltransferase NC3_03530 PF11033 Competence protein J (ComJ) NC3_03540 PF17202 Single cache domain 3 NC3_03540 PF00672 HAMP domain NC3_03540 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain NC3_03550 PF14040 Deoxyribonuclease NucA/NucB NC3_03560 PF05378 Hydantoinase/oxoprolinase N-terminal region NC3_03560 PF01968 Hydantoinase/oxoprolinase NC3_03590 PF00005 ABC transporter NC3_03590 PF08402 TOBE domain NC3_03600 PF00528 Binding-protein-dependent transport system inner membrane component NC3_03610 PF00528 Binding-protein-dependent transport system inner membrane component NC3_03620 PF00501 AMP-binding enzyme NC3_03620 PF13193 AMP-binding enzyme C-terminal domain NC3_03620 PF00550 Phosphopantetheine attachment site NC3_03620 PF00668 Condensation domain NC3_03630 PF00501 AMP-binding enzyme NC3_03630 PF13193 AMP-binding enzyme C-terminal domain NC3_03630 PF00668 Condensation domain NC3_03630 PF00550 Phosphopantetheine attachment site NC3_03640 PF00550 Phosphopantetheine attachment site NC3_03640 PF00975 Thioesterase domain NC3_03640 PF13193 AMP-binding enzyme C-terminal domain NC3_03640 PF00501 AMP-binding enzyme NC3_03640 PF00668 Condensation domain NC3_03650 PF00501 AMP-binding enzyme NC3_03650 PF13193 AMP-binding enzyme C-terminal domain NC3_03650 PF00668 Condensation domain NC3_03650 PF00550 Phosphopantetheine attachment site NC3_03660 PF00501 AMP-binding enzyme NC3_03660 PF13193 AMP-binding enzyme C-terminal domain NC3_03660 PF00668 Condensation domain NC3_03660 PF00550 Phosphopantetheine attachment site NC3_03670 PF00975 Thioesterase domain NC3_03680 PF00005 ABC transporter NC3_03710 PF00892 EamA-like transporter family NC3_03720 PF00392 Bacterial regulatory proteins, gntR family NC3_03720 PF00155 Aminotransferase class I and II NC3_03730 PF01648 4'-phosphopantetheinyl transferase superfamily NC3_03740 PF06445 GyrI-like small molecule binding domain NC3_03740 PF12833 Helix-turn-helix domain NC3_03770 PF00005 ABC transporter NC3_03780 PF00528 Binding-protein-dependent transport system inner membrane component NC3_03790 PF00497 Bacterial extracellular solute-binding proteins, family 3 NC3_03800 PF01738 Dienelactone hydrolase family NC3_03810 PF00324 Amino acid permease NC3_03820 PF00854 POT family NC3_03830 PF12708 Pectate lyase superfamily protein NC3_03830 PF13229 Right handed beta helix region NC3_03840 PF00296 Luciferase-like monooxygenase NC3_03850 PF00583 Acetyltransferase (GNAT) family NC3_03860 PF00497 Bacterial extracellular solute-binding proteins, family 3 NC3_03870 PF00528 Binding-protein-dependent transport system inner membrane component NC3_03880 PF00005 ABC transporter NC3_03890 PF01546 Peptidase family M20/M25/M40 NC3_03890 PF07687 Peptidase dimerisation domain NC3_03900 PF03972 MmgE/PrpD family NC3_03910 PF00072 Response regulator receiver domain NC3_03910 PF00486 Transcriptional regulatory protein, C terminal NC3_03920 PF00672 HAMP domain NC3_03920 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase NC3_03920 PF00512 His Kinase A (phospho-acceptor) domain NC3_03930 PF14361 RsbT co-antagonist protein rsbRD N-terminal domain NC3_03930 PF01740 STAS domain NC3_03940 PF00696 Amino acid kinase family NC3_03940 PF13840 ACT domain NC3_03950 PF07690 Major Facilitator Superfamily NC3_03960 PF00440 Bacterial regulatory proteins, tetR family NC3_03980 PF01022 Bacterial regulatory protein, arsR family NC3_04000 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family NC3_04000 PF03466 LysR substrate binding domain NC3_04010 PF00155 Aminotransferase class I and II NC3_04010 PF00392 Bacterial regulatory proteins, gntR family NC3_04020 PF00202 Aminotransferase class-III NC3_04030 PF13520 Amino acid permease NC3_04040 PF00171 Aldehyde dehydrogenase family NC3_04050 PF02525 Flavodoxin-like fold NC3_04060 PF07987 Domain of unkown function (DUF1775) NC3_04070 PF04234 CopC domain NC3_04070 PF05425 Copper resistance protein D NC3_04070 PF13115 YtkA-like NC3_04080 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit NC3_04080 PF02378 Phosphotransferase system, EIIC NC3_04090 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 NC3_04100 PF01232 Mannitol dehydrogenase Rossmann domain NC3_04100 PF08125 Mannitol dehydrogenase C-terminal domain NC3_04110 PF02743 Cache domain NC3_04110 PF00672 HAMP domain NC3_04110 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain NC3_04180 PF12681 Glyoxalase-like domain NC3_04190 PF05901 Excalibur calcium-binding domain NC3_04210 PF03746 LamB/YcsF family NC3_04220 PF01566 Natural resistance-associated macrophage protein NC3_04230 PF07286 Protein of unknown function (DUF1445) NC3_04240 PF02682 Carboxyltransferase domain, subdomain C and D NC3_04250 PF02626 Carboxyltransferase domain, subdomain A and B NC3_04260 PF01614 Bacterial transcriptional regulator NC3_04260 PF09339 IclR helix-turn-helix domain NC3_04270 PF02525 Flavodoxin-like fold NC3_04280 PF13472 GDSL-like Lipase/Acylhydrolase family NC3_04300 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit NC3_04300 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 NC3_04300 PF00874 PRD domain NC3_04300 PF05043 Mga helix-turn-helix domain NC3_04300 PF08279 HTH domain NC3_04310 PF13649 Methyltransferase domain NC3_04330 PF16242 Pyridoxamine 5'-phosphate oxidase like NC3_04360 PF12823 Domain of unknown function (DUF3817) NC3_04370 PF07729 FCD domain NC3_04370 PF00392 Bacterial regulatory proteins, gntR family NC3_04380 PF02311 AraC-like ligand binding domain NC3_04380 PF12833 Helix-turn-helix domain NC3_04390 PF00892 EamA-like transporter family NC3_04400 PF00180 Isocitrate/isopropylmalate dehydrogenase NC3_04410 PF01131 DNA topoisomerase NC3_04410 PF01751 Toprim domain NC3_04430 PF00990 Diguanylate cyclase, GGDEF domain NC3_04440 PF10096 Uncharacterized protein conserved in bacteria (DUF2334) NC3_04460 PF03170 Bacterial cellulose synthase subunit NC3_04480 PF13520 Amino acid permease NC3_04490 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain NC3_04490 PF00205 Thiamine pyrophosphate enzyme, central domain NC3_04490 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain NC3_04500 PF14410 HNH/ENDO VII superfamily nuclease with conserved GHE residues NC3_04500 PF04740 LXG domain of WXG superfamily NC3_04500 PF14449 Pre-toxin TG NC3_04540 PF13302 Acetyltransferase (GNAT) domain NC3_04550 PF01566 Natural resistance-associated macrophage protein NC3_04560 PF04226 Transglycosylase associated protein NC3_04570 PF12787 EcsC protein family NC3_04580 PF03480 Bacterial extracellular solute-binding protein, family 7 NC3_04590 PF14689 Sensor_kinase_SpoOB-type, alpha-helical domain NC3_04590 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase NC3_04590 PF17203 Single cache domain 3 NC3_04600 PF08279 HTH domain NC3_04600 PF00072 Response regulator receiver domain NC3_04620 PF00375 Sodium:dicarboxylate symporter family NC3_04630 PF01594 AI-2E family transporter NC3_04640 PF00375 Sodium:dicarboxylate symporter family NC3_04650 PF00005 ABC transporter NC3_04680 PF13040 Fur-regulated basic protein B NC3_04690 PF00085 Thioredoxin NC3_04700 PF07478 D-ala D-ala ligase C-terminus NC3_04700 PF01820 D-ala D-ala ligase N-terminus NC3_04710 PF02875 Mur ligase family, glutamate ligase domain NC3_04710 PF01225 Mur ligase family, catalytic domain NC3_04710 PF08245 Mur ligase middle domain NC3_04720 PF12146 Serine aminopeptidase, S33 NC3_04740 PF00270 DEAD/DEAH box helicase NC3_04740 PF00271 Helicase conserved C-terminal domain NC3_04750 PF03703 Bacterial PH domain NC3_04760 PF03703 Bacterial PH domain NC3_04770 PF01694 Rhomboid family NC3_04780 PF01648 4'-phosphopantetheinyl transferase superfamily NC3_04800 PF01168 Alanine racemase, N-terminal domain NC3_04800 PF00842 Alanine racemase, C-terminal domain NC3_04810 PF01402 Ribbon-helix-helix protein, copG family NC3_04820 PF02452 PemK-like, MazF-like toxin of type II toxin-antitoxin system NC3_04830 PF08678 Rsbr N terminal NC3_04830 PF01740 STAS domain NC3_04840 PF01740 STAS domain NC3_04850 PF13581 Histidine kinase-like ATPase domain NC3_04860 PF08673 Phosphoserine phosphatase RsbU, N-terminal domain NC3_04860 PF07228 Stage II sporulation protein E (SpoIIE) NC3_04870 PF01740 STAS domain NC3_04880 PF13581 Histidine kinase-like ATPase domain NC3_04890 PF04542 Sigma-70 region 2 NC3_04890 PF04539 Sigma-70 region 3 NC3_04890 PF04545 Sigma-70, region 4 NC3_04900 PF07228 Stage II sporulation protein E (SpoIIE) NC3_04910 PF16921 Tex protein YqgF-like domain NC3_04910 PF17674 HHH domain NC3_04910 PF00575 S1 RNA binding domain NC3_04910 PF09371 Tex-like protein N-terminal domain NC3_04920 PF10263 SprT-like family NC3_04920 PF17283 SprT-like zinc ribbon domain NC3_04930 PF00676 Dehydrogenase E1 component NC3_04940 PF02779 Transketolase, pyrimidine binding domain NC3_04940 PF02780 Transketolase, C-terminal domain NC3_04950 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) NC3_04950 PF00364 Biotin-requiring enzyme NC3_04950 PF02817 e3 binding domain NC3_04960 PF07992 Pyridine nucleotide-disulphide oxidoreductase NC3_04960 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain NC3_04970 PF00158 Sigma-54 interaction domain NC3_04970 PF01590 GAF domain NC3_04970 PF02954 Bacterial regulatory protein, Fis family NC3_05040 PF00313 'Cold-shock' DNA-binding domain NC3_05050 PF02378 Phosphotransferase system, EIIC NC3_05050 PF00367 phosphotransferase system, EIIB NC3_05050 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 NC3_05060 PF04794 YdjC-like protein NC3_05070 PF00874 PRD domain NC3_05070 PF03123 CAT RNA binding domain NC3_05080 PF08240 Alcohol dehydrogenase GroES-like domain NC3_05080 PF00107 Zinc-binding dehydrogenase NC3_05090 PF13411 MerR HTH family regulatory protein NC3_05100 PF00722 Glycosyl hydrolases family 16 NC3_05120 PF00440 Bacterial regulatory proteins, tetR family NC3_05130 PF07690 Major Facilitator Superfamily NC3_05140 PF07859 alpha/beta hydrolase fold NC3_05160 PF00106 short chain dehydrogenase NC3_05170 PF17763 Glutaminase/Asparaginase C-terminal domain NC3_05170 PF00710 Asparaginase, N-terminal NC3_05180 PF12697 Alpha/beta hydrolase family NC3_05210 PF16925 Tetracyclin repressor-like, C-terminal domain NC3_05210 PF00440 Bacterial regulatory proteins, tetR family NC3_05220 PF07690 Major Facilitator Superfamily NC3_05250 PF12746 GNAT acetyltransferase NC3_05270 PF00583 Acetyltransferase (GNAT) family NC3_05280 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily NC3_05300 PF00440 Bacterial regulatory proteins, tetR family NC3_05310 PF01872 RibD C-terminal domain NC3_05320 PF01047 MarR family NC3_05330 PF00881 Nitroreductase family NC3_05360 PF07883 Cupin domain NC3_05360 PF01381 Helix-turn-helix NC3_05370 PF01810 LysE type translocator NC3_05380 PF00583 Acetyltransferase (GNAT) family NC3_05400 PF01596 O-methyltransferase NC3_05420 PF03591 AzlC protein NC3_05430 PF00892 EamA-like transporter family NC3_05450 PF00375 Sodium:dicarboxylate symporter family NC3_05470 PF00586 AIR synthase related protein, N-terminal domain NC3_05470 PF02769 AIR synthase related protein, C-terminal domain NC3_05480 PF02367 Threonylcarbamoyl adenosine biosynthesis protein TsaE NC3_05490 PF00814 Glycoprotease family NC3_05500 PF00583 Acetyltransferase (GNAT) family NC3_05510 PF00814 Glycoprotease family NC3_05520 PF12848 ABC transporter NC3_05520 PF16326 ABC transporter C-terminal domain NC3_05520 PF00005 ABC transporter NC3_05530 PF01967 MoaC family NC3_05540 PF02629 CoA binding domain NC3_05540 PF06971 Putative DNA-binding protein N-terminus NC3_05550 PF02416 mttA/Hcf106 family NC3_05560 PF00902 Sec-independent protein translocase protein (TatC) NC3_05580 PF14146 Domain of unknown function (DUF4305) NC3_05590 PF02517 CPBP intramembrane metalloprotease NC3_05600 PF00166 Chaperonin 10 Kd subunit NC3_05610 PF00118 TCP-1/cpn60 chaperonin family NC3_05620 PF01047 MarR family NC3_05630 PF04299 Putative FMN-binding domain NC3_05640 PF02557 D-alanyl-D-alanine carboxypeptidase NC3_05690 PF03330 Lytic transglycolase NC3_05700 PF07676 WD40-like Beta Propeller Repeat NC3_05720 PF07731 Multicopper oxidase NC3_05720 PF00394 Multicopper oxidase NC3_05720 PF07732 Multicopper oxidase NC3_05730 PF00324 Amino acid permease NC3_05740 PF01545 Cation efflux family NC3_05740 PF16916 Dimerisation domain of Zinc Transporter NC3_05750 PF07726 ATPase family associated with various cellular activities (AAA) NC3_05750 PF17863 AAA lid domain NC3_05760 PF01882 Protein of unknown function DUF58 NC3_05770 PF01841 Transglutaminase-like superfamily NC3_05770 PF11992 Domain of unknown function (DUF3488) NC3_05770 PF13559 Domain of unknown function (DUF4129) NC3_05780 PF00958 GMP synthase C terminal domain NC3_05780 PF02540 NAD synthase NC3_05780 PF00117 Glutamine amidotransferase class-I NC3_05790 PF04073 Aminoacyl-tRNA editing domain NC3_05800 PF12833 Helix-turn-helix domain NC3_05810 PF00682 HMGL-like NC3_05810 PF08502 LeuA allosteric (dimerisation) domain NC3_05830 PF12833 Helix-turn-helix domain NC3_05840 PF02540 NAD synthase NC3_05840 PF00958 GMP synthase C terminal domain NC3_05840 PF00117 Glutamine amidotransferase class-I NC3_05860 PF00183 Hsp90 protein NC3_05880 PF13302 Acetyltransferase (GNAT) domain NC3_05910 PF08281 Sigma-70, region 4 NC3_05910 PF04542 Sigma-70 region 2 NC3_05940 PF07690 Major Facilitator Superfamily NC3_05950 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family NC3_05950 PF03466 LysR substrate binding domain NC3_05960 PF00860 Permease family NC3_05980 PF10055 Uncharacterized small protein (DUF2292) NC3_06000 PF10035 Uncharacterized protein conserved in bacteria (DUF2179) NC3_06010 PF14044 NETI protein NC3_06020 PF00731 AIR carboxylase NC3_06030 PF02222 ATP-grasp domain NC3_06030 PF17769 Phosphoribosylaminoimidazole carboxylase C-terminal domain NC3_06040 PF10397 Adenylosuccinate lyase C-terminus NC3_06040 PF00206 Lyase NC3_06050 PF01259 SAICAR synthetase NC3_06060 PF02700 Phosphoribosylformylglycinamidine (FGAM) synthase NC3_06080 PF18072 Formylglycinamide ribonucleotide amidotransferase linker domain NC3_06080 PF00586 AIR synthase related protein, N-terminal domain NC3_06080 PF02769 AIR synthase related protein, C-terminal domain NC3_06090 PF00156 Phosphoribosyl transferase domain NC3_06100 PF02769 AIR synthase related protein, C-terminal domain NC3_06100 PF00586 AIR synthase related protein, N-terminal domain NC3_06110 PF00551 Formyl transferase NC3_06120 PF02142 MGS-like domain NC3_06120 PF01808 AICARFT/IMPCHase bienzyme NC3_06130 PF01071 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain NC3_06130 PF02843 Phosphoribosylglycinamide synthetase, C domain NC3_06130 PF02844 Phosphoribosylglycinamide synthetase, N domain NC3_06170 PF00202 Aminotransferase class-III NC3_06180 PF01144 Coenzyme A transferase NC3_06190 PF01144 Coenzyme A transferase NC3_06200 PF01546 Peptidase family M20/M25/M40 NC3_06200 PF07687 Peptidase dimerisation domain NC3_06210 PF11127 Protein of unknown function (DUF2892) NC3_06220 PF01979 Amidohydrolase family NC3_06220 PF13382 Adenine deaminase C-terminal domain NC3_06230 PF01371 Trp repressor protein NC3_06260 PF01645 Conserved region in glutamate synthase NC3_06290 PF01884 PcrB family NC3_06300 PF00580 UvrD/REP helicase N-terminal domain NC3_06300 PF13361 UvrD-like helicase C-terminal domain NC3_06310 PF00533 BRCA1 C Terminus (BRCT) domain NC3_06310 PF01653 NAD-dependent DNA ligase adenylation domain NC3_06310 PF03120 NAD-dependent DNA ligase OB-fold domain NC3_06310 PF03119 NAD-dependent DNA ligase C4 zinc finger domain NC3_06310 PF12826 Helix-hairpin-helix motif NC3_06320 PF07537 CamS sex pheromone cAM373 precursor NC3_06330 PF01636 Phosphotransferase enzyme family NC3_06340 PF02308 MgtC family NC3_06350 PF00474 Sodium:solute symporter family NC3_06360 PF02686 Glu-tRNAGln amidotransferase C subunit NC3_06370 PF01425 Amidase NC3_06380 PF02934 GatB/GatE catalytic domain NC3_06380 PF02637 GatB domain NC3_06390 PF00440 Bacterial regulatory proteins, tetR family NC3_06400 PF00873 AcrB/AcrD/AcrF family NC3_06410 PF01156 Inosine-uridine preferring nucleoside hydrolase NC3_06420 PF00781 Diacylglycerol kinase catalytic domain NC3_06430 PF05958 tRNA (Uracil-5-)-methyltransferase NC3_06430 PF01938 TRAM domain NC3_06440 PF01207 Dihydrouridine synthase (Dus) NC3_06470 PF02082 Transcriptional regulator NC3_06480 PF07992 Pyridine nucleotide-disulphide oxidoreductase NC3_06500 PF13021 Domain of unknown function (DUF3885) NC3_06510 PF11975 Family 4 glycosyl hydrolase C-terminal domain NC3_06510 PF02056 Family 4 glycosyl hydrolase NC3_06520 PF01418 Helix-turn-helix domain, rpiR family NC3_06520 PF01380 SIS domain NC3_06530 PF07690 Major Facilitator Superfamily NC3_06550 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family NC3_06550 PF03466 LysR substrate binding domain NC3_06570 PF13037 Domain of unknown function (DUF3898) NC3_06570 PF13039 Protein of unknown function (DUF3900) NC3_06590 PF00483 Nucleotidyl transferase NC3_06600 PF16363 GDP-mannose 4,6 dehydratase NC3_06610 PF03407 Nucleotide-diphospho-sugar transferase NC3_06620 PF00535 Glycosyl transferase family 2 NC3_06630 PF03407 Nucleotide-diphospho-sugar transferase NC3_06640 PF07690 Major Facilitator Superfamily NC3_06650 PF05223 NTF2-like N-terminal transpeptidase domain NC3_06650 PF03717 Penicillin-binding Protein dimerisation domain NC3_06650 PF00905 Penicillin binding protein transpeptidase domain NC3_06660 PF00939 Sodium:sulfate symporter transmembrane region NC3_06690 PF00011 Hsp20/alpha crystallin family NC3_06720 PF13520 Amino acid permease NC3_06730 PF00535 Glycosyl transferase family 2 NC3_06730 PF13181 Tetratricopeptide repeat NC3_06740 PF16326 ABC transporter C-terminal domain NC3_06740 PF00005 ABC transporter NC3_06740 PF12848 ABC transporter NC3_06750 PF02649 Type I GTP cyclohydrolase folE2 NC3_06760 PF13411 MerR HTH family regulatory protein NC3_06770 PF07690 Major Facilitator Superfamily NC3_06780 PF00005 ABC transporter NC3_06780 PF12848 ABC transporter NC3_06790 PF00271 Helicase conserved C-terminal domain NC3_06790 PF00270 DEAD/DEAH box helicase NC3_06800 PF00107 Zinc-binding dehydrogenase NC3_06800 PF16884 N-terminal domain of oxidoreductase NC3_06810 PF11486 Protein of unknown function (DUF3212) NC3_06820 PF11181 Heat induced stress protein YflT NC3_06840 PF00925 GTP cyclohydrolase II NC3_06840 PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase NC3_06850 PF03781 Sulfatase-modifying factor enzyme 1 NC3_06880 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region NC3_06880 PF01872 RibD C-terminal domain NC3_06900 PF14689 Sensor_kinase_SpoOB-type, alpha-helical domain NC3_06900 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase NC3_06910 PF12431 Transcriptional regulator NC3_06910 PF08279 HTH domain NC3_06910 PF00072 Response regulator receiver domain NC3_06920 PF03401 Tripartite tricarboxylate transporter family receptor NC3_06930 PF03600 Citrate transporter NC3_06950 PF05870 Phenolic acid decarboxylase (PAD) NC3_06960 PF03551 Transcriptional regulator PadR-like family NC3_06960 PF10400 Virulence activator alpha C-term NC3_06970 PF02898 Nitric oxide synthase, oxygenase domain NC3_06990 PF00708 Acylphosphatase NC3_07000 PF03475 3-alpha domain NC3_07000 PF03473 MOSC domain NC3_07010 PF11121 Protein of unknown function (DUF2639) NC3_07030 PF00557 Metallopeptidase family M24 NC3_07040 PF02378 Phosphotransferase system, EIIC NC3_07040 PF00367 phosphotransferase system, EIIB NC3_07050 PF05675 Protein of unknown function (DUF817) NC3_07060 PF16302 Domain of unknown function (DUF4944) NC3_07080 PF14172 Domain of unknown function (DUF4309) NC3_07090 PF00884 Sulfatase NC3_07100 PF00282 Pyridoxal-dependent decarboxylase conserved domain NC3_07110 PF00672 HAMP domain NC3_07110 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain NC3_07120 PF09350 Domain of unknown function (DUF1992) NC3_07130 PF02378 Phosphotransferase system, EIIC NC3_07130 PF00367 phosphotransferase system, EIIB NC3_07140 PF16657 Maltogenic Amylase, C-terminal domain NC3_07140 PF00128 Alpha amylase, catalytic domain NC3_07150 PF00392 Bacterial regulatory proteins, gntR family NC3_07150 PF07702 UTRA domain NC3_07170 PF02872 5'-nucleotidase, C-terminal domain NC3_07170 PF00149 Calcineurin-like phosphoesterase NC3_07180 PF01965 DJ-1/PfpI family NC3_07190 PF06569 Protein of unknown function (DUF1128) NC3_07200 PF01235 Sodium:alanine symporter family NC3_07210 PF01451 Low molecular weight phosphotyrosine protein phosphatase NC3_07230 PF03631 Virulence factor BrkB NC3_07250 PF13302 Acetyltransferase (GNAT) domain NC3_07260 PF07690 Major Facilitator Superfamily NC3_07280 PF01699 Sodium/calcium exchanger protein NC3_07290 PF14167 YfkD-like protein NC3_07300 PF01709 Transcriptional regulator NC3_07320 PF00924 Mechanosensitive ion channel NC3_07330 PF08756 YfkB-like domain NC3_07330 PF04055 Radical SAM superfamily NC3_07350 PF01522 Polysaccharide deacetylase NC3_07360 PF10898 Protein of unknown function (DUF2716) NC3_07370 PF01544 CorA-like Mg2+ transporter protein NC3_07390 PF00730 HhH-GPD superfamily base excision DNA repair protein NC3_07400 PF01938 TRAM domain NC3_07400 PF05958 tRNA (Uracil-5-)-methyltransferase NC3_07430 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family NC3_07430 PF03466 LysR substrate binding domain NC3_07440 PF14552 Tautomerase enzyme NC3_07450 PF02627 Carboxymuconolactone decarboxylase family NC3_07460 PF13411 MerR HTH family regulatory protein NC3_07460 PF07739 TipAS antibiotic-recognition domain NC3_07470 PF07690 Major Facilitator Superfamily NC3_07500 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) NC3_07500 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain NC3_07500 PF03129 Anticodon binding domain NC3_07500 PF02824 TGS domain NC3_07600 PF00893 Small Multidrug Resistance protein NC3_07610 PF00893 Small Multidrug Resistance protein NC3_07620 PF17934 Tetracyclin repressor-like, C-terminal domain NC3_07620 PF00440 Bacterial regulatory proteins, tetR family NC3_07650 PF00657 GDSL-like Lipase/Acylhydrolase NC3_07660 PF07992 Pyridine nucleotide-disulphide oxidoreductase NC3_07670 PF02805 Metal binding domain of Ada NC3_07670 PF12833 Helix-turn-helix domain NC3_07680 PF01497 Periplasmic binding protein NC3_07690 PF00664 ABC transporter transmembrane region NC3_07690 PF00005 ABC transporter NC3_07700 PF02694 Uncharacterised BCR, YnfA/UPF0060 family NC3_07710 PF04545 Sigma-70, region 4 NC3_07710 PF04542 Sigma-70 region 2 NC3_07730 PF00107 Zinc-binding dehydrogenase NC3_07730 PF08240 Alcohol dehydrogenase GroES-like domain NC3_07740 PF12867 DinB superfamily NC3_07760 PF01047 MarR family NC3_07770 PF09924 Uncharacterised conserved protein (DUF2156) NC3_07770 PF03706 Lysylphosphatidylglycerol synthase TM region NC3_07800 PF18801 response regulator aspartate phosphatase H, N terminal NC3_07810 PF00881 Nitroreductase family NC3_07830 PF01370 NAD dependent epimerase/dehydratase family NC3_07830 PF08338 Domain of unknown function (DUF1731) NC3_07840 PF02631 RecX family NC3_07850 PF08838 Protein of unknown function (DUF1811) NC3_07870 PF08176 Small acid-soluble spore protein K family NC3_07880 PF14043 WVELL protein NC3_07890 PF00535 Glycosyl transferase family 2 NC3_07900 PF09586 Bacterial membrane protein YfhO NC3_07910 PF01494 FAD binding domain NC3_07930 PF00190 Cupin NC3_07940 PF12841 YvrJ protein family NC3_07950 PF04545 Sigma-70, region 4 NC3_07970 PF04307 LexA-binding, inner membrane-associated putative hydrolase NC3_07980 PF00730 HhH-GPD superfamily base excision DNA repair protein NC3_07980 PF14815 NUDIX domain NC3_08010 PF04259 Small, acid-soluble spore protein, gamma-type NC3_08030 PF04167 Protein of unknown function (DUF402) NC3_08040 PF00664 ABC transporter transmembrane region NC3_08040 PF00005 ABC transporter NC3_08050 PF08352 Oligopeptide/dipeptide transporter, C-terminal region NC3_08050 PF00005 ABC transporter NC3_08060 PF08352 Oligopeptide/dipeptide transporter, C-terminal region NC3_08060 PF00005 ABC transporter NC3_08070 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle NC3_08080 PF00528 Binding-protein-dependent transport system inner membrane component NC3_08090 PF00528 Binding-protein-dependent transport system inner membrane component NC3_08090 PF12911 N-terminal TM domain of oligopeptide transport permease C NC3_08100 PF06081 Aromatic acid exporter family member 1 NC3_08110 PF00202 Aminotransferase class-III NC3_08120 PF00578 AhpC/TSA family NC3_08130 PF01475 Ferric uptake regulator family NC3_08140 PF11023 Zinc-ribbon containing domain NC3_08150 PF14540 Nucleotidyltransferase-like NC3_08150 PF18576 Helix-turn-helix domain NC3_08250 PF00884 Sulfatase NC3_08260 PF10502 Signal peptidase, peptidase S26 NC3_08270 PF01053 Cys/Met metabolism PLP-dependent enzyme NC3_08290 PF00005 ABC transporter NC3_08300 PF09084 NMT1/THI5 like NC3_08310 PF00528 Binding-protein-dependent transport system inner membrane component NC3_08320 PF00296 Luciferase-like monooxygenase NC3_08340 PF00005 ABC transporter NC3_08400 PF08331 Domain of unknown function (DUF1730) NC3_08410 PF12671 Putative amidase domain NC3_08420 PF00588 SpoU rRNA Methylase family NC3_08430 PF08298 PrkA AAA domain NC3_08430 PF06798 PrkA serine protein kinase C-terminal domain NC3_08440 PF04285 Protein of unknown function (DUF444) NC3_08470 PF07690 Major Facilitator Superfamily NC3_08480 PF03358 NADPH-dependent FMN reductase NC3_08500 PF00313 'Cold-shock' DNA-binding domain NC3_08510 PF07694 5TMR of 5TMR-LYT NC3_08510 PF00990 Diguanylate cyclase, GGDEF domain NC3_08540 PF09580 Sporulation lipoprotein YhcN/YlaJ (Spore_YhcN_YlaJ) NC3_08560 PF07875 Coat F domain NC3_08570 PF00989 PAS fold NC3_08570 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase NC3_08570 PF00512 His Kinase A (phospho-acceptor) domain NC3_08570 PF13426 PAS domain NC3_08570 PF13188 PAS domain NC3_08580 PF02872 5'-nucleotidase, C-terminal domain NC3_08580 PF00746 LPXTG cell wall anchor motif NC3_08580 PF00149 Calcineurin-like phosphoesterase NC3_08580 PF00565 Staphylococcal nuclease homologue NC3_08590 PF04203 Sortase domain NC3_08600 PF00849 RNA pseudouridylate synthase NC3_08600 PF01479 S4 domain NC3_08620 PF13419 Haloacid dehalogenase-like hydrolase NC3_08630 PF00583 Acetyltransferase (GNAT) family NC3_08630 PF00795 Carbon-nitrogen hydrolase NC3_08670 PF05651 Putative sugar diacid recognition NC3_08670 PF17853 GGDEF-like domain NC3_08670 PF13556 PucR C-terminal helix-turn-helix domain NC3_08680 PF00202 Aminotransferase class-III NC3_08690 PF04309 Glycerol-3-phosphate responsive antiterminator NC3_08700 PF00230 Major intrinsic protein NC3_08710 PF00370 FGGY family of carbohydrate kinases, N-terminal domain NC3_08710 PF02782 FGGY family of carbohydrate kinases, C-terminal domain NC3_08720 PF01266 FAD dependent oxidoreductase NC3_08720 PF16901 C-terminal domain of alpha-glycerophosphate oxidase NC3_08730 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I NC3_08730 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II NC3_08730 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III NC3_08730 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain NC3_08740 PF07730 Histidine kinase NC3_08740 PF13185 GAF domain NC3_08750 PF00196 Bacterial regulatory proteins, luxR family NC3_08750 PF00072 Response regulator receiver domain NC3_08770 PF14148 YhdB-like protein NC3_08780 PF13028 Protein of unknown function (DUF3889) NC3_08790 PF00199 Catalase NC3_08790 PF06628 Catalase-related immune-responsive NC3_08800 PF02082 Transcriptional regulator NC3_08810 PF00970 Oxidoreductase FAD-binding domain NC3_08810 PF00042 Globin NC3_08810 PF00175 Oxidoreductase NAD-binding domain NC3_08820 PF04293 SpoVR like protein NC3_08830 PF00245 Alkaline phosphatase NC3_08840 PF01476 LysM domain NC3_08840 PF00877 NlpC/P60 family NC3_08850 PF13520 Amino acid permease NC3_08860 PF17453 Sigma-M inhibitor NC3_08870 PF13791 Sigma factor regulator C-terminal NC3_08870 PF13800 Sigma factor regulator N-terminal NC3_08880 PF04542 Sigma-70 region 2 NC3_08880 PF08281 Sigma-70, region 4 NC3_08890 PF01553 Acyltransferase NC3_08900 PF00571 CBS domain NC3_08900 PF03471 Transporter associated domain NC3_08900 PF01595 Cyclin M transmembrane N-terminal domain NC3_08910 PF13411 MerR HTH family regulatory protein NC3_08920 PF00571 CBS domain NC3_08920 PF01595 Cyclin M transmembrane N-terminal domain NC3_08920 PF03471 Transporter associated domain NC3_08940 PF02537 CrcB-like protein, Camphor Resistance (CrcB) NC3_08950 PF02537 CrcB-like protein, Camphor Resistance (CrcB) NC3_08960 PF03009 Glycerophosphoryl diester phosphodiesterase family NC3_08970 PF00924 Mechanosensitive ion channel NC3_08980 PF02146 Sir2 family NC3_08990 PF01522 Polysaccharide deacetylase NC3_09000 PF01063 Amino-transferase class IV NC3_09010 PF00582 Universal stress protein family NC3_09020 PF00664 ABC transporter transmembrane region NC3_09020 PF00005 ABC transporter NC3_09030 PF00664 ABC transporter transmembrane region NC3_09030 PF00005 ABC transporter NC3_09040 PF13460 NAD(P)H-binding NC3_09050 PF00269 Small, acid-soluble spore proteins, alpha/beta type NC3_09060 PF17912 MalK OB fold domain NC3_09060 PF00005 ABC transporter NC3_09060 PF03459 TOBE domain NC3_09070 PF13556 PucR C-terminal helix-turn-helix domain NC3_09080 PF17277 Family of unknown function (DUF5342) NC3_09090 PF14398 YheC/D like ATP-grasp NC3_09100 PF14398 YheC/D like ATP-grasp NC3_09110 PF04286 Protein of unknown function (DUF445) NC3_09120 PF06133 Control of competence regulator ComK, YlbF/YmcA NC3_09140 PF04055 Radical SAM superfamily NC3_09150 PF13434 L-lysine 6-monooxygenase (NADPH-requiring) NC3_09160 PF00999 Sodium/hydrogen exchanger family NC3_09170 PF02080 TrkA-C domain NC3_09190 PF00378 Enoyl-CoA hydratase/isomerase NC3_09200 PF14120 YhzD-like protein NC3_09210 PF00149 Calcineurin-like phosphoesterase NC3_09220 PF13514 AAA domain NC3_09230 PF01966 HD domain NC3_09240 PF14147 Sporulation protein YhaL NC3_09260 PF11667 Putative zincin peptidase NC3_09270 PF08963 Protein of unknown function (DUF1878) NC3_09280 PF01047 MarR family NC3_09290 PF12732 YtxH-like protein NC3_09310 PF17099 Tryptophan transporter TrpP NC3_09320 PF00266 Aminotransferase class-V NC3_09330 PF01230 HIT domain NC3_09340 PF00005 ABC transporter NC3_09350 PF05975 Bacterial ABC transporter protein EcsB NC3_09360 PF12787 EcsC protein family NC3_09370 PF07687 Peptidase dimerisation domain NC3_09370 PF01546 Peptidase family M20/M25/M40 NC3_09390 PF03992 Antibiotic biosynthesis monooxygenase NC3_09400 PF00905 Penicillin binding protein transpeptidase domain NC3_09400 PF00912 Transglycosylase NC3_09410 PF01208 Uroporphyrinogen decarboxylase (URO-D) NC3_09420 PF00762 Ferrochelatase NC3_09430 PF01593 Flavin containing amine oxidoreductase NC3_09440 PF17932 Tetracyclin repressor-like, C-terminal domain NC3_09440 PF00440 Bacterial regulatory proteins, tetR family NC3_09460 PF05343 M42 glutamyl aminopeptidase NC3_09470 PF00375 Sodium:dicarboxylate symporter family NC3_09480 PF14149 YhfH-like protein NC3_09490 PF12706 Beta-lactamase superfamily domain NC3_09500 PF03099 Biotin/lipoate A/B protein ligase family NC3_09500 PF10437 Bacterial lipoate protein ligase C-terminus NC3_09510 PF00501 AMP-binding enzyme NC3_09510 PF13193 AMP-binding enzyme C-terminal domain NC3_09530 PF01435 Peptidase family M48 NC3_09530 PF16491 CAAX prenyl protease N-terminal, five membrane helices NC3_09540 PF05922 Peptidase inhibitor I9 NC3_09540 PF00082 Subtilase family NC3_09550 PF00300 Histidine phosphatase superfamily (branch 1) NC3_09560 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain NC3_09570 PF01266 FAD dependent oxidoreductase NC3_09570 PF00355 Rieske [2Fe-2S] domain NC3_09590 PF08858 IDEAL domain NC3_09600 PF06338 ComK protein NC3_09610 PF01168 Alanine racemase, N-terminal domain NC3_09610 PF14031 Putative serine dehydratase domain NC3_09630 PF00155 Aminotransferase class I and II NC3_09630 PF00392 Bacterial regulatory proteins, gntR family NC3_09640 PF07690 Major Facilitator Superfamily NC3_09650 PF01337 Barstar (barnase inhibitor) NC3_09660 PF01032 FecCD transport family NC3_09670 PF01032 FecCD transport family NC3_09680 PF00005 ABC transporter NC3_09690 PF01497 Periplasmic binding protein NC3_09700 PF03816 Cell envelope-related transcriptional attenuator domain NC3_09730 PF09335 SNARE associated Golgi protein NC3_09740 PF10502 Signal peptidase, peptidase S26 NC3_09750 PF05145 Transition state regulatory protein AbrB NC3_09790 PF07681 DoxX NC3_09800 PF02915 Rubrerythrin NC3_09810 PF12705 PD-(D/E)XK nuclease superfamily NC3_09820 PF13361 UvrD-like helicase C-terminal domain NC3_09820 PF00580 UvrD/REP helicase N-terminal domain NC3_09820 PF12705 PD-(D/E)XK nuclease superfamily NC3_09830 PF00149 Calcineurin-like phosphoesterase NC3_09830 PF12320 Type 5 capsule protein repressor C-terminal domain NC3_09840 PF13476 AAA domain NC3_09860 PF10676 Spore germination protein gerPA/gerPF NC3_09870 PF10970 Spore germination protein GerPE NC3_09890 PF10737 Spore germination protein GerPC NC3_09900 PF10803 Spore germination GerPB NC3_09910 PF10676 Spore germination protein gerPA/gerPF NC3_09930 PF08757 CotH kinase protein NC3_09940 PF01557 Fumarylacetoacetate (FAA) hydrolase family NC3_09950 PF07457 Protein of unknown function (DUF1516) NC3_09960 PF10949 Protein of unknown function (DUF2777) NC3_09970 PF13537 Glutamine amidotransferase domain NC3_09970 PF00733 Asparagine synthase NC3_09980 PF01593 Flavin containing amine oxidoreductase NC3_09990 PF01593 Flavin containing amine oxidoreductase NC3_10010 PF01554 MatE NC3_10020 PF02311 AraC-like ligand binding domain NC3_10020 PF12833 Helix-turn-helix domain NC3_10060 PF00202 Aminotransferase class-III NC3_10070 PF00282 Pyridoxal-dependent decarboxylase conserved domain NC3_10080 PF06276 Ferric iron reductase FhuF-like transporter NC3_10080 PF04183 IucA / IucC family NC3_10100 PF13434 L-lysine 6-monooxygenase (NADPH-requiring) NC3_10110 PF04183 IucA / IucC family NC3_10110 PF06276 Ferric iron reductase FhuF-like transporter NC3_10140 PF02310 B12 binding domain NC3_10140 PF02607 B12 binding domain NC3_10140 PF02965 Vitamin B12 dependent methionine synthase, activation domain NC3_10140 PF00809 Pterin binding enzyme NC3_10140 PF02574 Homocysteine S-methyltransferase NC3_10150 PF02219 Methylenetetrahydrofolate reductase NC3_10150 PF02574 Homocysteine S-methyltransferase NC3_10160 PF04461 Protein of unknown function (DUF520) NC3_10170 PF17783 CvfB-like winged helix domain NC3_10170 PF13509 S1 domain NC3_10180 PF02608 ABC transporter substrate-binding protein PnrA-like NC3_10190 PF00672 HAMP domain NC3_10190 PF02743 Cache domain NC3_10190 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain NC3_10200 PF02645 Uncharacterised protein, DegV family COG1307 NC3_10210 PF10035 Uncharacterized protein conserved in bacteria (DUF2179) NC3_10210 PF02588 Uncharacterised 5xTM membrane BCR, YitT family COG1284 NC3_10220 PF12690 Intracellular proteinase inhibitor NC3_10230 PF12758 Protein of unknown function (DUF3813) NC3_10260 PF00326 Prolyl oligopeptidase family NC3_10270 PF01883 Iron-sulfur cluster assembly protein NC3_10280 PF01565 FAD binding domain NC3_10290 PF07690 Major Facilitator Superfamily NC3_10300 PF01118 Semialdehyde dehydrogenase, NAD binding domain NC3_10300 PF02774 Semialdehyde dehydrogenase, dimerisation domain NC3_10310 PF01960 ArgJ family NC3_10320 PF00696 Amino acid kinase family NC3_10330 PF00202 Aminotransferase class-III NC3_10340 PF00988 Carbamoyl-phosphate synthase small chain, CPSase domain NC3_10340 PF00117 Glutamine amidotransferase class-I NC3_10350 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain NC3_10350 PF02787 Carbamoyl-phosphate synthetase large chain, oligomerisation domain NC3_10360 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain NC3_10360 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain NC3_10370 PF14168 YjzC-like protein NC3_10380 PF07690 Major Facilitator Superfamily NC3_10390 PF11151 Protein of unknown function (DUF2929) NC3_10420 PF02608 ABC transporter substrate-binding protein PnrA-like NC3_10430 PF10815 ComZ NC3_10460 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal NC3_10460 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III NC3_10470 PF02801 Beta-ketoacyl synthase, C-terminal domain NC3_10470 PF00109 Beta-ketoacyl synthase, N-terminal domain NC3_10480 PF10026 Predicted Zn-dependent protease (DUF2268) NC3_10490 PF00005 ABC transporter NC3_10490 PF08352 Oligopeptide/dipeptide transporter, C-terminal region NC3_10500 PF08352 Oligopeptide/dipeptide transporter, C-terminal region NC3_10500 PF00005 ABC transporter NC3_10510 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle NC3_10520 PF00528 Binding-protein-dependent transport system inner membrane component NC3_10530 PF00528 Binding-protein-dependent transport system inner membrane component NC3_10530 PF12911 N-terminal TM domain of oligopeptide transport permease C NC3_10540 PF12227 Protein of unknown function (DUF3603) NC3_10550 PF00579 tRNA synthetases class I (W and Y) NC3_10560 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle NC3_10570 PF00528 Binding-protein-dependent transport system inner membrane component NC3_10580 PF00528 Binding-protein-dependent transport system inner membrane component NC3_10580 PF12911 N-terminal TM domain of oligopeptide transport permease C NC3_10590 PF00005 ABC transporter NC3_10590 PF08352 Oligopeptide/dipeptide transporter, C-terminal region NC3_10600 PF00005 ABC transporter NC3_10600 PF08352 Oligopeptide/dipeptide transporter, C-terminal region NC3_10620 PF13508 Acetyltransferase (GNAT) domain NC3_10630 PF03960 ArsC family NC3_10640 PF03741 Integral membrane protein TerC family NC3_10650 PF05389 Negative regulator of genetic competence (MecA) NC3_10660 PF13396 Phospholipase_D-nuclease N-terminal NC3_10660 PF13091 PLD-like domain NC3_10680 PF08439 Oligopeptidase F NC3_10680 PF01432 Peptidase family M3 NC3_10710 PF01152 Bacterial-like globin NC3_10720 PF01464 Transglycosylase SLT domain NC3_10730 PF01928 CYTH domain NC3_10750 PF04607 Region found in RelA / SpoT proteins NC3_10760 PF01513 ATP-NAD kinase NC3_10770 PF00849 RNA pseudouridylate synthase NC3_10780 PF00149 Calcineurin-like phosphoesterase NC3_10790 PF02080 TrkA-C domain NC3_10790 PF02254 TrkA-N domain NC3_10790 PF00999 Sodium/hydrogen exchanger family NC3_10800 PF03070 TENA/THI-4/PQQC family NC3_10810 PF02581 Thiamine monophosphate synthase NC3_10820 PF01266 FAD dependent oxidoreductase NC3_10830 PF02597 ThiS family NC3_10840 PF05690 Thiazole biosynthesis protein ThiG NC3_10850 PF00899 ThiF family NC3_10860 PF08543 Phosphomethylpyrimidine kinase NC3_10880 PF14153 Spore coat protein CotO NC3_10890 PF10612 Spore coat protein Z NC3_10900 PF10612 Spore coat protein Z NC3_10910 PF07552 Spore Coat Protein X and V domain NC3_10930 PF07552 Spore Coat Protein X and V domain NC3_10940 PF07098 Protein of unknown function (DUF1360) NC3_10970 PF14069 Stage VI sporulation protein F NC3_10980 PF13361 UvrD-like helicase C-terminal domain NC3_10980 PF00580 UvrD/REP helicase N-terminal domain NC3_11000 PF13673 Acetyltransferase (GNAT) domain NC3_11020 PF00756 Putative esterase NC3_11030 PF01053 Cys/Met metabolism PLP-dependent enzyme NC3_11040 PF01053 Cys/Met metabolism PLP-dependent enzyme NC3_11050 PF02899 Phage integrase, N-terminal SAM-like domain NC3_11050 PF00589 Phage integrase family NC3_11060 PF01510 N-acetylmuramoyl-L-alanine amidase NC3_11060 PF01471 Putative peptidoglycan binding domain NC3_11170 PF03255 Acetyl co-enzyme A carboxylase carboxyltransferase alpha subunit NC3_11200 PF13176 Tetratricopeptide repeat NC3_11200 PF18801 response regulator aspartate phosphatase H, N terminal NC3_11220 PF13673 Acetyltransferase (GNAT) domain NC3_11240 PF00302 Chloramphenicol acetyltransferase NC3_11260 PF00106 short chain dehydrogenase NC3_11280 PF01636 Phosphotransferase enzyme family NC3_11290 PF03466 LysR substrate binding domain NC3_11290 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family NC3_11300 PF01177 Asp/Glu/Hydantoin racemase NC3_11330 PF03466 LysR substrate binding domain NC3_11330 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family NC3_11340 PF07690 Major Facilitator Superfamily NC3_11350 PF07992 Pyridine nucleotide-disulphide oxidoreductase NC3_11350 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain NC3_11410 PF00842 Alanine racemase, C-terminal domain NC3_11410 PF01168 Alanine racemase, N-terminal domain NC3_11420 PF08240 Alcohol dehydrogenase GroES-like domain NC3_11420 PF00107 Zinc-binding dehydrogenase NC3_11430 PF08240 Alcohol dehydrogenase GroES-like domain NC3_11430 PF00107 Zinc-binding dehydrogenase NC3_11440 PF00440 Bacterial regulatory proteins, tetR family NC3_11460 PF00700 Bacterial flagellin C-terminal helical region NC3_11460 PF00669 Bacterial flagellin N-terminal helical region NC3_11470 PF00669 Bacterial flagellin N-terminal helical region NC3_11470 PF00700 Bacterial flagellin C-terminal helical region NC3_11480 PF01494 FAD binding domain NC3_11510 PF05908 Poly-gamma-glutamate hydrolase NC3_11520 PF06114 IrrE N-terminal-like domain NC3_11530 PF01510 N-acetylmuramoyl-L-alanine amidase NC3_11530 PF01476 LysM domain NC3_11530 PF01471 Putative peptidoglycan binding domain NC3_11550 PF14185 Antitoxin SpoIISB, type II toxin-antitoxin system NC3_11560 PF14171 Toxin SpoIISA, type II toxin-antitoxin system NC3_11570 PF01384 Phosphate transporter family NC3_11580 PF01865 Protein of unknown function DUF47 NC3_11620 PF00528 Binding-protein-dependent transport system inner membrane component NC3_11630 PF00528 Binding-protein-dependent transport system inner membrane component NC3_11640 PF00005 ABC transporter NC3_11640 PF17850 CysA C-terminal regulatory domain NC3_11640 PF12857 TOBE-like domain NC3_11660 PF03611 PTS system sugar-specific permease component NC3_11690 PF00107 Zinc-binding dehydrogenase NC3_11690 PF08240 Alcohol dehydrogenase GroES-like domain NC3_11700 PF00676 Dehydrogenase E1 component NC3_11710 PF02779 Transketolase, pyrimidine binding domain NC3_11710 PF02780 Transketolase, C-terminal domain NC3_11710 PF00364 Biotin-requiring enzyme NC3_11720 PF02817 e3 binding domain NC3_11720 PF00364 Biotin-requiring enzyme NC3_11720 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) NC3_11730 PF07992 Pyridine nucleotide-disulphide oxidoreductase NC3_11730 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain NC3_11760 PF04198 Putative sugar-binding domain NC3_11780 PF13520 Amino acid permease NC3_11790 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily NC3_11800 PF13180 PDZ domain NC3_11810 PF14748 Pyrroline-5-carboxylate reductase dimerisation NC3_11810 PF03807 NADP oxidoreductase coenzyme F420-dependent NC3_11820 PF04951 D-aminopeptidase NC3_11830 PF00528 Binding-protein-dependent transport system inner membrane component NC3_11840 PF00528 Binding-protein-dependent transport system inner membrane component NC3_11840 PF12911 N-terminal TM domain of oligopeptide transport permease C NC3_11850 PF00005 ABC transporter NC3_11850 PF08352 Oligopeptide/dipeptide transporter, C-terminal region NC3_11860 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle NC3_11880 PF02016 LD-carboxypeptidase N-terminal domain NC3_11880 PF17676 LD-carboxypeptidase C-terminal domain NC3_11890 PF13378 Enolase C-terminal domain-like NC3_11890 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain NC3_11900 PF00877 NlpC/P60 family NC3_11910 PF08352 Oligopeptide/dipeptide transporter, C-terminal region NC3_11910 PF00005 ABC transporter NC3_11930 PF03061 Thioesterase superfamily NC3_11940 PF03551 Transcriptional regulator PadR-like family NC3_11970 PF13302 Acetyltransferase (GNAT) domain NC3_11980 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain NC3_11980 PF02805 Metal binding domain of Ada NC3_11980 PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain NC3_11980 PF12833 Helix-turn-helix domain NC3_11990 PF00893 Small Multidrug Resistance protein NC3_12000 PF00893 Small Multidrug Resistance protein NC3_12020 PF01842 ACT domain NC3_12020 PF00551 Formyl transferase NC3_12030 PF00696 Amino acid kinase family NC3_12030 PF01472 PUA domain NC3_12040 PF00171 Aldehyde dehydrogenase family NC3_12050 PF18801 response regulator aspartate phosphatase H, N terminal NC3_12070 PF02566 OsmC-like protein NC3_12080 PF01047 MarR family NC3_12090 PF02566 OsmC-like protein NC3_12100 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region NC3_12110 PF08267 Cobalamin-independent synthase, N-terminal domain NC3_12110 PF01717 Cobalamin-independent synthase, Catalytic domain NC3_12120 PF00082 Subtilase family NC3_12150 PF00072 Response regulator receiver domain NC3_12150 PF00486 Transcriptional regulatory protein, C terminal NC3_12160 PF00672 HAMP domain NC3_12160 PF00512 His Kinase A (phospho-acceptor) domain NC3_12160 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase NC3_12170 PF03413 Peptidase propeptide and YPEB domain NC3_12180 PF03413 Peptidase propeptide and YPEB domain NC3_12210 PF00571 CBS domain NC3_12210 PF01769 Divalent cation transporter NC3_12210 PF03448 MgtE intracellular N domain NC3_12230 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family NC3_12230 PF03466 LysR substrate binding domain NC3_12250 PF13411 MerR HTH family regulatory protein NC3_12280 PF01047 MarR family NC3_12290 PF03707 Bacterial signalling protein N terminal repeat NC3_12290 PF00563 EAL domain NC3_12290 PF00990 Diguanylate cyclase, GGDEF domain NC3_12300 PF09335 SNARE associated Golgi protein NC3_12310 PF03741 Integral membrane protein TerC family NC3_12320 PF04542 Sigma-70 region 2 NC3_12330 PF12791 Anti-sigma factor N-terminus NC3_12340 PF00269 Small, acid-soluble spore proteins, alpha/beta type NC3_12350 PF08876 Domain of unknown function (DUF1836) NC3_12360 PF01435 Peptidase family M48 NC3_12370 PF02386 Cation transport protein NC3_12380 PF04239 Protein of unknown function (DUF421) NC3_12410 PF01757 Acyltransferase family NC3_12420 PF13188 PAS domain NC3_12420 PF00989 PAS fold NC3_12420 PF13426 PAS domain NC3_12420 PF00512 His Kinase A (phospho-acceptor) domain NC3_12420 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase NC3_12430 PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain NC3_12430 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain NC3_12450 PF01008 Initiation factor 2 subunit family NC3_12460 PF01636 Phosphotransferase enzyme family NC3_12470 PF00155 Aminotransferase class I and II NC3_12480 PF00016 Ribulose bisphosphate carboxylase large chain, catalytic domain NC3_12480 PF02788 Ribulose bisphosphate carboxylase large chain, N-terminal domain NC3_12500 PF00596 Class II Aldolase and Adducin N-terminal domain NC3_12510 PF03079 ARD/ARD' family NC3_12520 PF09388 Spo0E like sporulation regulatory protein NC3_12530 PF02743 Cache domain NC3_12530 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase NC3_12530 PF00512 His Kinase A (phospho-acceptor) domain NC3_12540 PF01047 MarR family NC3_12550 PF00691 OmpA family NC3_12550 PF13677 Membrane MotB of proton-channel complex MotA/MotB NC3_12560 PF01618 MotA/TolQ/ExbB proton channel family NC3_12570 PF00004 ATPase family associated with various cellular activities (AAA) NC3_12570 PF07724 AAA domain (Cdc48 subfamily) NC3_12570 PF17871 AAA lid domain NC3_12570 PF10431 C-terminal, D2-small domain, of ClpB protein NC3_12590 PF06508 Queuosine biosynthesis protein QueC NC3_12600 PF01242 6-pyruvoyl tetrahydropterin synthase NC3_12610 PF04055 Radical SAM superfamily NC3_12620 PF14489 QueF-like protein NC3_12630 PF01638 HxlR-like helix-turn-helix NC3_12660 PF09953 Uncharacterized protein conserved in bacteria (DUF2187) NC3_12680 PF07486 Cell Wall Hydrolase NC3_12690 PF01943 Polysaccharide biosynthesis protein NC3_12700 PF00578 AhpC/TSA family NC3_12720 PF01321 Creatinase/Prolidase N-terminal domain NC3_12720 PF00557 Metallopeptidase family M24 NC3_12740 PF00356 Bacterial regulatory proteins, lacI family NC3_12740 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family NC3_12750 PF03123 CAT RNA binding domain NC3_12750 PF00874 PRD domain NC3_12760 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 NC3_12760 PF00367 phosphotransferase system, EIIB NC3_12760 PF02378 Phosphotransferase system, EIIC NC3_12770 PF00381 PTS HPr component phosphorylation site NC3_12780 PF00391 PEP-utilising enzyme, mobile domain NC3_12780 PF02896 PEP-utilising enzyme, TIM barrel domain NC3_12780 PF05524 PEP-utilising enzyme, N-terminal NC3_12790 PF11132 Transcriptional regulator protein (SplA) NC3_12810 PF02743 Cache domain NC3_12810 PF00672 HAMP domain NC3_12810 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain NC3_12820 PF00106 short chain dehydrogenase NC3_12830 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase NC3_12830 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase NC3_12840 PF00188 Cysteine-rich secretory protein family NC3_12850 PF03717 Penicillin-binding Protein dimerisation domain NC3_12850 PF00905 Penicillin binding protein transpeptidase domain NC3_12860 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase NC3_12860 PF08447 PAS fold NC3_12860 PF00989 PAS fold NC3_12860 PF00512 His Kinase A (phospho-acceptor) domain NC3_12870 PF00155 Aminotransferase class I and II NC3_12880 PF01545 Cation efflux family NC3_12880 PF16916 Dimerisation domain of Zinc Transporter NC3_12900 PF06271 RDD family NC3_12920 PF01584 CheW-like domain NC3_12920 PF00072 Response regulator receiver domain NC3_12930 PF14177 YkyB-like protein NC3_12940 PF00892 EamA-like transporter family NC3_12950 PF00892 EamA-like transporter family NC3_12980 PF07690 Major Facilitator Superfamily NC3_12990 PF03734 L,D-transpeptidase catalytic domain NC3_12990 PF01476 LysM domain NC3_13000 PF00149 Calcineurin-like phosphoesterase NC3_13000 PF10518 TAT (twin-arginine translocation) pathway signal sequence NC3_13020 PF00563 EAL domain NC3_13020 PF10388 EAL-domain associated signalling protein domain NC3_13030 PF05067 Manganese containing catalase NC3_13040 PF08796 Protein of unknown function (DUF1797) NC3_13050 PF04308 Ribonuclease H-like NC3_13060 PF14156 Antirepressor AbbA NC3_13080 PF03466 LysR substrate binding domain NC3_13080 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family NC3_13100 PF00258 Flavodoxin NC3_13120 PF00258 Flavodoxin NC3_13130 PF08503 Tetrahydrodipicolinate succinyltransferase N-terminal NC3_13130 PF00132 Bacterial transferase hexapeptide (six repeats) NC3_13130 PF14602 Hexapeptide repeat of succinyl-transferase NC3_13140 PF07687 Peptidase dimerisation domain NC3_13140 PF01546 Peptidase family M20/M25/M40 NC3_13150 PF03698 Uncharacterised protein family (UPF0180) NC3_13160 PF00924 Mechanosensitive ion channel NC3_13170 PF10417 C-terminal domain of 1-Cys peroxiredoxin NC3_13170 PF00578 AhpC/TSA family NC3_13180 PF00578 AhpC/TSA family NC3_13210 PF12804 MobA-like NTP transferase domain NC3_13220 PF00899 ThiF family NC3_13230 PF03454 MoeA C-terminal region (domain IV) NC3_13230 PF00994 Probable molybdopterin binding domain NC3_13230 PF03453 MoeA N-terminal region (domain I and II) NC3_13240 PF03205 Molybdopterin guanine dinucleotide synthesis protein B NC3_13250 PF02391 MoaE protein NC3_13260 PF02597 ThiS family NC3_13290 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion NC3_13300 PF00005 ABC transporter NC3_13310 PF02687 FtsX-like permease family NC3_13310 PF12704 MacB-like periplasmic core domain NC3_13320 PF00455 DeoR C terminal sensor domain NC3_13320 PF08220 DeoR-like helix-turn-helix domain NC3_13330 PF00294 pfkB family carbohydrate kinase NC3_13340 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 NC3_13340 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit NC3_13350 PF10502 Signal peptidase, peptidase S26 NC3_13370 PF00005 ABC transporter NC3_13370 PF12848 ABC transporter NC3_13380 PF02073 Thermophilic metalloprotease (M29) NC3_13390 PF17447 Uncharacterized YkpC-like NC3_13410 PF18277 AbrB C-terminal domain NC3_13410 PF04014 Antidote-toxin recognition MazE, bacterial antitoxin NC3_13420 PF00512 His Kinase A (phospho-acceptor) domain NC3_13420 PF00989 PAS fold NC3_13420 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase NC3_13430 PF06094 Gamma-glutamyl cyclotransferase, AIG2-like NC3_13440 PF02254 TrkA-N domain NC3_13440 PF02080 TrkA-C domain NC3_13450 PF13382 Adenine deaminase C-terminal domain NC3_13450 PF01979 Amidohydrolase family NC3_13460 PF00753 Metallo-beta-lactamase superfamily NC3_13460 PF07521 Zn-dependent metallo-hydrolase RNA specificity domain NC3_13460 PF17770 Ribonuclease J C-terminal domain NC3_13470 PF07288 Protein of unknown function (DUF1447) NC3_13490 PF01327 Polypeptide deformylase NC3_13520 PF00676 Dehydrogenase E1 component NC3_13530 PF02780 Transketolase, C-terminal domain NC3_13530 PF02779 Transketolase, pyrimidine binding domain NC3_13540 PF00364 Biotin-requiring enzyme NC3_13540 PF02817 e3 binding domain NC3_13540 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) NC3_13550 PF07992 Pyridine nucleotide-disulphide oxidoreductase NC3_13550 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain NC3_13570 PF13790 SR1 protein NC3_13580 PF01276 Orn/Lys/Arg decarboxylase, major domain NC3_13580 PF03711 Orn/Lys/Arg decarboxylase, C-terminal domain NC3_13590 PF05256 Uncharacterised protein family (UPF0223) NC3_13600 PF06335 Protein of unknown function (DUF1054) NC3_13620 PF00459 Inositol monophosphatase family NC3_13650 PF04542 Sigma-70 region 2 NC3_13650 PF08281 Sigma-70, region 4 NC3_13660 PF13490 Putative zinc-finger NC3_13690 PF03144 Elongation factor Tu domain 2 NC3_13690 PF00009 Elongation factor Tu GTP binding domain NC3_13690 PF00679 Elongation factor G C-terminus NC3_13690 PF14492 Elongation Factor G, domain II NC3_13700 PF14036 YlaH-like protein NC3_13710 PF09963 Uncharacterized protein conserved in bacteria (DUF2197) NC3_13720 PF09580 Sporulation lipoprotein YhcN/YlaJ (Spore_YhcN_YlaJ) NC3_13730 PF02562 PhoH-like protein NC3_13730 PF13638 PIN domain NC3_13750 PF04960 Glutaminase NC3_13760 PF07408 Protein of unknown function (DUF1507) NC3_13770 PF01098 Cell cycle protein NC3_13780 PF02785 Biotin carboxylase C-terminal domain NC3_13780 PF00289 Biotin carboxylase, N-terminal domain NC3_13780 PF00364 Biotin-requiring enzyme NC3_13780 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain NC3_13780 PF00682 HMGL-like NC3_13780 PF02436 Conserved carboxylase domain NC3_13790 PF03441 FAD binding domain of DNA photolyase NC3_13790 PF00875 DNA photolyase NC3_13800 PF02628 Cytochrome oxidase assembly protein NC3_13810 PF01040 UbiA prenyltransferase family NC3_13820 PF00116 Cytochrome C oxidase subunit II, periplasmic domain NC3_13820 PF02790 Cytochrome C oxidase subunit II, transmembrane domain NC3_13820 PF00034 Cytochrome c NC3_13830 PF00115 Cytochrome C and Quinol oxidase polypeptide I NC3_13840 PF00510 Cytochrome c oxidase subunit III NC3_13850 PF03626 Prokaryotic Cytochrome C oxidase subunit IV NC3_13860 PF09678 Cytochrome c oxidase caa3 assembly factor (Caa3_CtaG) NC3_13870 PF08868 YugN-like family NC3_13880 PF00571 CBS domain NC3_13890 PF00188 Cysteine-rich secretory protein family NC3_13890 PF14504 CAP-associated N-terminal NC3_13900 PF14071 Putative coat protein NC3_13910 PF14003 YlbE-like protein NC3_13930 PF06133 Control of competence regulator ComK, YlbF/YmcA NC3_13940 PF09902 Uncharacterized protein conserved in bacteria (DUF2129) NC3_13960 PF01467 Cytidylyltransferase-like NC3_13970 PF07670 Nucleoside recognition NC3_13980 PF01734 Patatin-like phospholipase NC3_13990 PF05362 Lon protease (S16) C-terminal proteolytic domain NC3_13990 PF13180 PDZ domain NC3_14000 PF05636 HIGH Nucleotidyl Transferase NC3_14020 PF02620 Large ribosomal RNA subunit accumulation protein YceD NC3_14030 PF01783 Ribosomal L32p protein family NC3_14050 PF00583 Acetyltransferase (GNAT) family NC3_14060 PF02558 Ketopantoate reductase PanE/ApbA NC3_14060 PF08546 Ketopantoate reductase PanE/ApbA C terminal NC3_14070 PF10079 Bacillithiol biosynthesis BshC NC3_14080 PF02381 MraZ protein, putative antitoxin-like NC3_14090 PF01795 MraW methylase family NC3_14110 PF03793 PASTA domain NC3_14110 PF03717 Penicillin-binding Protein dimerisation domain NC3_14110 PF00905 Penicillin binding protein transpeptidase domain NC3_14120 PF03793 PASTA domain NC3_14120 PF03717 Penicillin-binding Protein dimerisation domain NC3_14120 PF00905 Penicillin binding protein transpeptidase domain NC3_14130 PF01225 Mur ligase family, catalytic domain NC3_14130 PF02875 Mur ligase family, glutamate ligase domain NC3_14130 PF08245 Mur ligase middle domain NC3_14140 PF00953 Glycosyl transferase family 4 NC3_14140 PF10555 Phospho-N-acetylmuramoyl-pentapeptide-transferase signature 1 NC3_14150 PF02875 Mur ligase family, glutamate ligase domain NC3_14150 PF08245 Mur ligase middle domain NC3_14160 PF01098 Cell cycle protein NC3_14170 PF04101 Glycosyltransferase family 28 C-terminal domain NC3_14170 PF03033 Glycosyltransferase family 28 N-terminal domain NC3_14180 PF01565 FAD binding domain NC3_14180 PF02873 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain NC3_14190 PF08478 POTRA domain, FtsQ-type NC3_14200 PF05949 Bacterial protein of unknown function (DUF881) NC3_14210 PF05949 Bacterial protein of unknown function (DUF881) NC3_14220 PF06947 Protein of unknown function (DUF1290) NC3_14230 PF02491 SHS2 domain inserted in FTSA NC3_14240 PF12327 FtsZ family, C-terminal domain NC3_14240 PF00091 Tubulin/FtsZ family, GTPase domain NC3_14250 PF05922 Peptidase inhibitor I9 NC3_14250 PF00082 Subtilase family NC3_14260 PF03419 Sporulation factor SpoIIGA NC3_14270 PF04542 Sigma-70 region 2 NC3_14270 PF04545 Sigma-70, region 4 NC3_14280 PF04542 Sigma-70 region 2 NC3_14280 PF04539 Sigma-70 region 3 NC3_14280 PF04545 Sigma-70, region 4 NC3_14290 PF04198 Putative sugar-binding domain NC3_14320 PF03608 PTS system enzyme II sorbitol-specific factor NC3_14330 PF07663 Sorbitol phosphotransferase enzyme II C-terminus NC3_14330 PF03612 Sorbitol phosphotransferase enzyme II N-terminus NC3_14340 PF03829 PTS system glucitol/sorbitol-specific IIA component NC3_14350 PF00005 ABC transporter NC3_14360 PF05239 PRC-barrel domain NC3_14370 PF02578 Multi-copper polyphenol oxidoreductase laccase NC3_14380 PF01168 Alanine racemase, N-terminal domain NC3_14390 PF04472 Cell division protein SepF NC3_14400 PF02325 YGGT family NC3_14410 PF17774 Putative RNA-binding domain in YlmH NC3_14410 PF01479 S4 domain NC3_14420 PF05103 DivIVA protein NC3_14430 PF00133 tRNA synthetases class I (I, L, M and V) NC3_14430 PF08264 Anticodon-binding domain of tRNA NC3_14440 PF01258 Prokaryotic dksA/traR C4-type zinc finger NC3_14450 PF01252 Signal peptidase (SPase) II NC3_14460 PF00849 RNA pseudouridylate synthase NC3_14460 PF01479 S4 domain NC3_14470 PF00156 Phosphoribosyl transferase domain NC3_14480 PF00860 Permease family NC3_14490 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain NC3_14490 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain NC3_14500 PF01979 Amidohydrolase family NC3_14510 PF00988 Carbamoyl-phosphate synthase small chain, CPSase domain NC3_14510 PF00117 Glutamine amidotransferase class-I NC3_14520 PF02787 Carbamoyl-phosphate synthetase large chain, oligomerisation domain NC3_14520 PF02142 MGS-like domain NC3_14520 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain NC3_14530 PF10418 Iron-sulfur cluster binding domain of dihydroorotate dehydrogenase B NC3_14540 PF01180 Dihydroorotate dehydrogenase NC3_14550 PF00215 Orotidine 5'-phosphate decarboxylase / HUMPS family NC3_14560 PF00156 Phosphoribosyl transferase domain NC3_14580 PF01507 Phosphoadenosine phosphosulfate reductase family NC3_14590 PF01384 Phosphate transporter family NC3_14600 PF01747 ATP-sulfurylase NC3_14600 PF14306 PUA-like domain NC3_14620 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases NC3_14630 PF01903 CbiX NC3_14650 PF05670 NFACT protein RNA binding domain NC3_14660 PF00689 Cation transporting ATPase, C-terminus NC3_14660 PF00690 Cation transporter/ATPase, N-terminus NC3_14670 PF08340 Domain of unknown function (DUF1732) NC3_14670 PF03755 YicC-like family, N-terminal region NC3_14680 PF04025 Domain of unknown function (DUF370) NC3_14690 PF00625 Guanylate kinase NC3_14700 PF01192 RNA polymerase Rpb6 NC3_14710 PF02441 Flavoprotein NC3_14710 PF04127 DNA / pantothenate metabolism flavoprotein NC3_14720 PF18319 PriA DNA helicase Cys-rich region (CRR) domain NC3_14720 PF18074 Primosomal protein N C-terminal domain NC3_14720 PF00271 Helicase conserved C-terminal domain NC3_14720 PF17764 3′ DNA-binding domain (3′BD) NC3_14720 PF04851 Type III restriction enzyme, res subunit NC3_14730 PF01327 Polypeptide deformylase NC3_14740 PF00551 Formyl transferase NC3_14740 PF02911 Formyl transferase, C-terminal domain NC3_14750 PF01029 NusB family NC3_14750 PF01189 16S rRNA methyltransferase RsmB/F NC3_14760 PF04055 Radical SAM superfamily NC3_14780 PF00069 Protein kinase domain NC3_14780 PF03793 PASTA domain NC3_14790 PF03193 RsgA GTPase NC3_14790 PF16745 RsgA N-terminal domain NC3_14800 PF00834 Ribulose-phosphate 3 epimerase family NC3_14810 PF04265 Thiamin pyrophosphokinase, vitamin B1 binding domain NC3_14810 PF04263 Thiamin pyrophosphokinase, catalytic domain NC3_14820 PF00830 Ribosomal L28 family NC3_14830 PF03780 Asp23 family, cell envelope-related function NC3_14840 PF13684 Dihydroxyacetone kinase family NC3_14840 PF02734 DAK2 domain NC3_14850 PF03315 Serine dehydratase beta chain NC3_14850 PF01842 ACT domain NC3_14860 PF03313 Serine dehydratase alpha chain NC3_14870 PF00270 DEAD/DEAH box helicase NC3_14870 PF00271 Helicase conserved C-terminal domain NC3_14870 PF17191 RecG wedge domain NC3_14890 PF02504 Fatty acid synthesis protein NC3_14900 PF00698 Acyl transferase domain NC3_14920 PF00550 Phosphopantetheine attachment site NC3_14930 PF00035 Double-stranded RNA binding motif NC3_14930 PF14622 Ribonuclease-III-like NC3_14940 PF06470 SMC proteins Flexible Hinge Domain NC3_14940 PF02463 RecF/RecN/SMC N terminal domain NC3_14950 PF02881 SRP54-type protein, helical bundle domain NC3_14950 PF00448 SRP54-type protein, GTPase domain NC3_14960 PF04297 Putative helix-turn-helix protein, YlxM / p13 like NC3_14970 PF00448 SRP54-type protein, GTPase domain NC3_14970 PF02881 SRP54-type protein, helical bundle domain NC3_14970 PF02978 Signal peptide binding domain NC3_14980 PF00886 Ribosomal protein S16 NC3_15000 PF11068 YlqD protein NC3_15010 PF05239 PRC-barrel domain NC3_15010 PF01782 RimM N-terminal domain NC3_15020 PF01746 tRNA (Guanine-1)-methyltransferase NC3_15030 PF01245 Ribosomal protein L19 NC3_15040 PF01926 50S ribosome-binding GTPase NC3_15050 PF01351 Ribonuclease HII NC3_15070 PF01312 FlhB HrpN YscU SpaS Family NC3_15080 PF08442 ATP-grasp domain NC3_15080 PF00549 CoA-ligase NC3_15090 PF02629 CoA binding domain NC3_15090 PF00549 CoA-ligase NC3_15100 PF02481 DNA recombination-mediator protein A NC3_15110 PF01131 DNA topoisomerase NC3_15110 PF01396 Topoisomerase DNA binding C4 zinc finger NC3_15110 PF01751 Toprim domain NC3_15120 PF01134 Glucose inhibited division protein A NC3_15130 PF00589 Phage integrase family NC3_15130 PF02899 Phage integrase, N-terminal SAM-like domain NC3_15140 PF00227 Proteasome subunit NC3_15150 PF00004 ATPase family associated with various cellular activities (AAA) NC3_15150 PF10431 C-terminal, D2-small domain, of ClpB protein NC3_15150 PF07724 AAA domain (Cdc48 subfamily) NC3_15160 PF08222 CodY helix-turn-helix domain NC3_15160 PF06018 CodY GAF-like domain NC3_15170 PF00460 Flagella basal body rod protein NC3_15180 PF00460 Flagella basal body rod protein NC3_15180 PF06429 Flagellar basal body rod FlgEFG protein C-terminal NC3_15190 PF02049 Flagellar hook-basal body complex protein FliE NC3_15200 PF01514 Secretory protein of YscJ/FliF family NC3_15200 PF08345 Flagellar M-ring protein C-terminal NC3_15210 PF14842 FliG N-terminal domain NC3_15210 PF14841 FliG middle domain NC3_15210 PF01706 FliG C-terminal domain NC3_15220 PF02108 Flagellar assembly protein FliH NC3_15230 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain NC3_15230 PF18269 T3SS EscN ATPase C-terminal domain NC3_15230 PF02874 ATP synthase alpha/beta family, beta-barrel domain NC3_15240 PF02050 Flagellar FliJ protein NC3_15250 PF03448 MgtE intracellular N domain NC3_15260 PF02120 Flagellar hook-length control protein FliK NC3_15270 PF03963 Flagellar hook capping protein - N-terminal region NC3_15280 PF06429 Flagellar basal body rod FlgEFG protein C-terminal NC3_15280 PF00460 Flagella basal body rod protein NC3_15290 PF06289 Flagellar and Swarming motility proteins NC3_15300 PF03748 Flagellar basal body-associated protein FliL NC3_15310 PF02154 Flagellar motor switch protein FliM NC3_15310 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term NC3_15320 PF04509 CheC-like family NC3_15320 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term NC3_15330 PF00072 Response regulator receiver domain NC3_15340 PF04347 Flagellar biosynthesis protein, FliO NC3_15350 PF00813 FliP family NC3_15360 PF01313 Bacterial export proteins, family 3 NC3_15370 PF01311 Bacterial export proteins, family 1 NC3_15380 PF01312 FlhB HrpN YscU SpaS Family NC3_15390 PF00771 FHIPEP family NC3_15400 PF00448 SRP54-type protein, GTPase domain NC3_15410 PF10609 NUBPL iron-transfer P-loop NTPase NC3_15420 PF00072 Response regulator receiver domain NC3_15420 PF01339 CheB methylesterase NC3_15430 PF01627 Hpt domain NC3_15430 PF07194 P2 response regulator binding domain NC3_15430 PF02895 Signal transducing histidine kinase, homodimeric domain NC3_15430 PF01584 CheW-like domain NC3_15430 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase NC3_15440 PF01584 CheW-like domain NC3_15450 PF04509 CheC-like family NC3_15460 PF03975 CheD chemotactic sensory transduction NC3_15470 PF04539 Sigma-70 region 3 NC3_15470 PF04542 Sigma-70 region 2 NC3_15470 PF04545 Sigma-70, region 4 NC3_15490 PF00318 Ribosomal protein S2 NC3_15500 PF00889 Elongation factor TS NC3_15510 PF00696 Amino acid kinase family NC3_15520 PF01765 Ribosome recycling factor NC3_15530 PF01255 Putative undecaprenyl diphosphate synthase NC3_15550 PF08436 1-deoxy-D-xylulose 5-phosphate reductoisomerase C-terminal domain NC3_15550 PF02670 1-deoxy-D-xylulose 5-phosphate reductoisomerase NC3_15550 PF13288 DXP reductoisomerase C-terminal domain NC3_15560 PF17820 PDZ domain NC3_15560 PF02163 Peptidase family M50 NC3_15570 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) NC3_15570 PF03129 Anticodon binding domain NC3_15570 PF04073 Aminoacyl-tRNA editing domain NC3_15580 PF14480 DNA polymerase III polC-type N-terminus I NC3_15580 PF00929 Exonuclease NC3_15580 PF17657 Bacterial DNA polymerase III alpha subunit finger domain NC3_15580 PF07733 Bacterial DNA polymerase III alpha NTPase domain NC3_15580 PF11490 DNA polymerase III polC-type N-terminus II NC3_15580 PF02811 PHP domain NC3_15580 PF14579 Helix-hairpin-helix motif NC3_15590 PF00942 Cellulose binding domain NC3_15590 PF00759 Glycosyl hydrolase family 9 NC3_15600 PF00942 Cellulose binding domain NC3_15600 PF02011 Glycosyl hydrolase family 48 NC3_15600 PF00759 Glycosyl hydrolase family 9 NC3_15610 PF12791 Anti-sigma factor N-terminus NC3_15610 PF00331 Glycosyl hydrolase family 10 NC3_15630 PF02576 RimP N-terminal domain NC3_15630 PF17384 RimP C-terminal SH3 domain NC3_15640 PF00575 S1 RNA binding domain NC3_15640 PF08529 NusA N-terminal domain NC3_15640 PF13184 NusA-like KH domain NC3_15650 PF04296 Protein of unknown function (DUF448) NC3_15660 PF01248 Ribosomal protein L7Ae/L30e/S12e/Gadd45 family NC3_15670 PF00009 Elongation factor Tu GTP binding domain NC3_15670 PF11987 Translation-initiation factor 2 NC3_15670 PF04760 Translation initiation factor IF-2, N-terminal region NC3_15680 PF04456 Protein of unknown function (DUF503) NC3_15690 PF02033 Ribosome-binding factor A NC3_15700 PF16198 tRNA pseudouridylate synthase B C-terminal domain NC3_15700 PF01509 TruB family pseudouridylate synthase (N terminal domain) NC3_15710 PF01687 Riboflavin kinase NC3_15710 PF06574 FAD synthetase NC3_15720 PF00312 Ribosomal protein S15 NC3_15730 PF00575 S1 RNA binding domain NC3_15730 PF03726 Polyribonucleotide nucleotidyltransferase, RNA binding domain NC3_15730 PF01138 3' exoribonuclease family, domain 1 NC3_15730 PF00013 KH domain NC3_15730 PF03725 3' exoribonuclease family, domain 2 NC3_15740 PF01522 Polysaccharide deacetylase NC3_15750 PF00675 Insulinase (Peptidase family M16) NC3_15750 PF05193 Peptidase M16 inactive domain NC3_15770 PF05239 PRC-barrel domain NC3_15780 PF01262 Alanine dehydrogenase/PNT, C-terminal domain NC3_15780 PF16924 Dipicolinate synthase subunit A N-terminal domain NC3_15790 PF02441 Flavoprotein NC3_15800 PF01118 Semialdehyde dehydrogenase, NAD binding domain NC3_15800 PF02774 Semialdehyde dehydrogenase, dimerisation domain NC3_15810 PF00696 Amino acid kinase family NC3_15810 PF13840 ACT domain NC3_15820 PF00701 Dihydrodipicolinate synthetase family NC3_15830 PF00753 Metallo-beta-lactamase superfamily NC3_15830 PF07521 Zn-dependent metallo-hydrolase RNA specificity domain NC3_15830 PF17770 Ribonuclease J C-terminal domain NC3_15840 PF00574 Clp protease NC3_15850 PF14035 YlzJ-like protein NC3_15860 PF17854 FtsK alpha domain NC3_15860 PF09397 Ftsk gamma domain NC3_15860 PF01580 FtsK/SpoIIIE family NC3_15870 PF00392 Bacterial regulatory proteins, gntR family NC3_15870 PF07702 UTRA domain NC3_15880 PF07690 Major Facilitator Superfamily NC3_15890 PF03176 MMPL family NC3_15900 PF05193 Peptidase M16 inactive domain NC3_15910 PF00675 Insulinase (Peptidase family M16) NC3_15910 PF05193 Peptidase M16 inactive domain NC3_15930 PF03176 MMPL family NC3_15950 PF11588 Protein of unknown function (DUF3243) NC3_15960 PF11868 Protein of unknown function (DUF3388) NC3_15970 PF13464 Domain of unknown function (DUF4115) NC3_15980 PF01066 CDP-alcohol phosphatidyltransferase NC3_15990 PF00994 Probable molybdopterin binding domain NC3_15990 PF02464 Competence-damaged protein NC3_15990 PF18146 Damage-inducible protein CinA KH domain NC3_16000 PF00154 recA bacterial DNA recombination protein NC3_16010 PF01966 HD domain NC3_16010 PF12072 Domain of unknown function (DUF3552) NC3_16010 PF00013 KH domain NC3_16020 PF13277 YmdB-like protein NC3_16030 PF04232 Stage V sporulation protein S (SpoVS) NC3_16040 PF00873 AcrB/AcrD/AcrF family NC3_16050 PF00107 Zinc-binding dehydrogenase NC3_16050 PF08240 Alcohol dehydrogenase GroES-like domain NC3_16060 PF00155 Aminotransferase class I and II NC3_16070 PF00919 Uncharacterized protein family UPF0004 NC3_16070 PF01938 TRAM domain NC3_16070 PF04055 Radical SAM superfamily NC3_16080 PF06133 Control of competence regulator ComK, YlbF/YmcA NC3_16090 PF10628 Outer spore coat protein E (CotE) NC3_16100 PF01624 MutS domain I NC3_16100 PF00488 MutS domain V NC3_16100 PF05190 MutS family domain IV NC3_16100 PF05188 MutS domain II NC3_16100 PF05192 MutS domain III NC3_16110 PF08676 MutL C terminal dimerisation domain NC3_16110 PF01119 DNA mismatch repair protein, C-terminal domain NC3_16130 PF17735 Biofilm surface layer A NC3_16150 PF02559 CarD-like/TRCF domain NC3_16160 PF05908 Poly-gamma-glutamate hydrolase NC3_16170 PF17874 MalT-like TPR region NC3_16170 PF18801 response regulator aspartate phosphatase H, N terminal NC3_16180 PF00082 Subtilase family NC3_16190 PF05908 Poly-gamma-glutamate hydrolase NC3_16200 PF02566 OsmC-like protein NC3_16210 PF00893 Small Multidrug Resistance protein NC3_16220 PF00893 Small Multidrug Resistance protein NC3_16250 PF12788 YmaF family NC3_16270 PF17209 Hfq protein NC3_16300 PF07972 NrdI Flavodoxin like NC3_16310 PF02867 Ribonucleotide reductase, barrel domain NC3_16310 PF00317 Ribonucleotide reductase, all-alpha domain NC3_16310 PF08343 Ribonucleotide reductase N-terminal NC3_16320 PF00268 Ribonucleotide reductase, small chain NC3_16340 PF01520 N-acetylmuramoyl-L-alanine amidase NC3_16340 PF05036 Sporulation related domain NC3_16350 PF00004 ATPase family associated with various cellular activities (AAA) NC3_16350 PF17866 AAA lid domain NC3_16360 PF01926 50S ribosome-binding GTPase NC3_16360 PF16360 GTP-binding GTPase Middle Region NC3_16360 PF13167 GTP-binding GTPase N-terminal NC3_16370 PF06838 Methionine gamma-lyase NC3_16380 PF13411 MerR HTH family regulatory protein NC3_16390 PF00120 Glutamine synthetase, catalytic domain NC3_16390 PF03951 Glutamine synthetase, beta-Grasp domain NC3_16400 PF00082 Subtilase family NC3_16420 PF04740 LXG domain of WXG superfamily NC3_16450 PF00293 NUDIX domain NC3_16470 PF18801 response regulator aspartate phosphatase H, N terminal NC3_16530 PF04740 LXG domain of WXG superfamily NC3_16540 PF04634 Protein of unknown function, DUF600 NC3_16570 PF01569 PAP2 superfamily NC3_16580 PF08818 Domain of unknown function (DU1801) NC3_16630 PF18801 response regulator aspartate phosphatase H, N terminal NC3_16650 PF06912 Protein of unknown function (DUF1275) NC3_16660 PF01068 ATP dependent DNA ligase domain NC3_16670 PF02735 Ku70/Ku80 beta-barrel domain NC3_16680 PF09954 Uncharacterized protein conserved in bacteria (DUF2188) NC3_16700 PF02082 Transcriptional regulator NC3_16710 PF05368 NmrA-like family NC3_16730 PF02754 Cysteine-rich domain NC3_16740 PF02589 LUD domain NC3_16740 PF13183 4Fe-4S dicluster domain NC3_16740 PF11870 Domain of unknown function (DUF3390) NC3_16750 PF02589 LUD domain NC3_16790 PF04239 Protein of unknown function (DUF421) NC3_16800 PF00440 Bacterial regulatory proteins, tetR family NC3_16800 PF16295 Tetracyclin repressor-like, C-terminal domain NC3_16810 PF00667 FAD binding domain NC3_16810 PF00258 Flavodoxin NC3_16810 PF00175 Oxidoreductase NAD-binding domain NC3_16810 PF00067 Cytochrome P450 NC3_16820 PF00089 Trypsin NC3_16830 PF13231 Dolichyl-phosphate-mannose-protein mannosyltransferase NC3_16840 PF14040 Deoxyribonuclease NucA/NucB NC3_16850 PF01740 STAS domain NC3_16860 PF16800 IseA DL-endopeptidase inhibitor NC3_16880 PF01726 LexA DNA binding domain NC3_16880 PF00717 Peptidase S24-like NC3_16890 PF01476 LysM domain NC3_16900 PF00239 Resolvase, N terminal domain NC3_16910 PF05979 Bacterial protein of unknown function (DUF896) NC3_16920 PF02779 Transketolase, pyrimidine binding domain NC3_16920 PF02780 Transketolase, C-terminal domain NC3_16920 PF00456 Transketolase, thiamine diphosphate binding domain NC3_16930 PF10747 Sporulation inhibitor of replication protein SirA NC3_16940 PF03672 Uncharacterised protein family (UPF0154) NC3_16950 PF09388 Spo0E like sporulation regulatory protein NC3_16960 PF02683 Cytochrome C biogenesis protein transmembrane region NC3_16970 PF07301 Protein of unknown function (DUF1453) NC3_16980 PF11084 Protein of unknown function (DUF2621) NC3_17000 PF08179 Small acid-soluble spore protein P family NC3_17020 PF00694 Aconitase C-terminal domain NC3_17020 PF00330 Aconitase family (aconitate hydratase) NC3_17030 PF00578 AhpC/TSA family NC3_17040 PF13040 Fur-regulated basic protein B NC3_17050 PF08177 Small acid-soluble spore protein N family NC3_17070 PF03061 Thioesterase superfamily NC3_17090 PF01521 Iron-sulphur cluster biosynthesis NC3_17100 PF02660 Glycerol-3-phosphate acyltransferase NC3_17110 PF13380 CoA binding domain NC3_17120 PF01751 Toprim domain NC3_17120 PF00986 DNA gyrase B subunit, carboxyl terminus NC3_17120 PF00204 DNA gyrase B NC3_17120 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase NC3_17130 PF03989 DNA gyrase C-terminal domain, beta-propeller NC3_17130 PF00521 DNA gyrase/topoisomerase IV, subunit A NC3_17160 PF07690 Major Facilitator Superfamily NC3_17170 PF00180 Isocitrate/isopropylmalate dehydrogenase NC3_17180 PF14602 Hexapeptide repeat of succinyl-transferase NC3_17180 PF12464 Maltose acetyltransferase NC3_17190 PF01451 Low molecular weight phosphotyrosine protein phosphatase NC3_17200 PF02040 Arsenical pump membrane protein NC3_17210 PF01022 Bacterial regulatory protein, arsR family NC3_17250 PF01323 DSBA-like thioredoxin domain NC3_17260 PF02525 Flavodoxin-like fold NC3_17280 PF00440 Bacterial regulatory proteins, tetR family NC3_17290 PF02525 Flavodoxin-like fold NC3_17300 PF01638 HxlR-like helix-turn-helix NC3_17320 PF00291 Pyridoxal-phosphate dependent enzyme NC3_17330 PF01042 Endoribonuclease L-PSP NC3_17360 PF01494 FAD binding domain NC3_17390 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region NC3_17400 PF00934 PE family NC3_17400 PF07859 alpha/beta hydrolase fold NC3_17410 PF13411 MerR HTH family regulatory protein NC3_17420 PF00232 Glycosyl hydrolase family 1 NC3_17430 PF00367 phosphotransferase system, EIIB NC3_17430 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 NC3_17430 PF02378 Phosphotransferase system, EIIC NC3_17440 PF00874 PRD domain NC3_17440 PF03123 CAT RNA binding domain NC3_17460 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase NC3_17460 PF00512 His Kinase A (phospho-acceptor) domain NC3_17470 PF00486 Transcriptional regulatory protein, C terminal NC3_17470 PF00072 Response regulator receiver domain NC3_17480 PF17189 Glycosyl hydrolase family 30 beta sandwich domain NC3_17480 PF02055 Glycosyl hydrolase family 30 TIM-barrel domain NC3_17490 PF04616 Glycosyl hydrolases family 43 NC3_17490 PF03422 Carbohydrate binding module (family 6) NC3_17500 PF00171 Aldehyde dehydrogenase family NC3_17510 PF02056 Family 4 glycosyl hydrolase NC3_17510 PF11975 Family 4 glycosyl hydrolase C-terminal domain NC3_17520 PF00528 Binding-protein-dependent transport system inner membrane component NC3_17530 PF00528 Binding-protein-dependent transport system inner membrane component NC3_17540 PF01547 Bacterial extracellular solute-binding protein NC3_17550 PF00356 Bacterial regulatory proteins, lacI family NC3_17560 PF00834 Ribulose-phosphate 3 epimerase family NC3_17590 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 NC3_17610 PF00583 Acetyltransferase (GNAT) family NC3_17620 PF00155 Aminotransferase class I and II NC3_17620 PF00392 Bacterial regulatory proteins, gntR family NC3_17630 PF18593 CdiI immunity protein NC3_17650 PF14449 Pre-toxin TG NC3_17650 PF04740 LXG domain of WXG superfamily NC3_17650 PF14410 HNH/ENDO VII superfamily nuclease with conserved GHE residues NC3_17670 PF01047 MarR family NC3_17680 PF07690 Major Facilitator Superfamily NC3_17690 PF01116 Fructose-bisphosphate aldolase class-II NC3_17700 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 NC3_17700 PF02378 Phosphotransferase system, EIIC NC3_17700 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit NC3_17710 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 NC3_17710 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit NC3_17720 PF00294 pfkB family carbohydrate kinase NC3_17730 PF01380 SIS domain NC3_17730 PF01418 Helix-turn-helix domain, rpiR family NC3_17740 PF13091 PLD-like domain NC3_17780 PF00171 Aldehyde dehydrogenase family NC3_17790 PF00175 Oxidoreductase NAD-binding domain NC3_17790 PF00258 Flavodoxin NC3_17790 PF00667 FAD binding domain NC3_17800 PF01077 Nitrite and sulphite reductase 4Fe-4S domain NC3_17800 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain NC3_17810 PF16177 Acetyl-coenzyme A synthetase N-terminus NC3_17810 PF00501 AMP-binding enzyme NC3_17810 PF13193 AMP-binding enzyme C-terminal domain NC3_17820 PF01039 Carboxyl transferase domain NC3_17830 PF00378 Enoyl-CoA hydratase/isomerase NC3_17840 PF00682 HMGL-like NC3_17850 PF00364 Biotin-requiring enzyme NC3_17860 PF02785 Biotin carboxylase C-terminal domain NC3_17860 PF00289 Biotin carboxylase, N-terminal domain NC3_17860 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain NC3_17870 PF00501 AMP-binding enzyme NC3_17870 PF13193 AMP-binding enzyme C-terminal domain NC3_17880 PF00441 Acyl-CoA dehydrogenase, C-terminal domain NC3_17880 PF02770 Acyl-CoA dehydrogenase, middle domain NC3_17880 PF02771 Acyl-CoA dehydrogenase, N-terminal domain NC3_17890 PF02638 Glycosyl hydrolase-like 10 NC3_17900 PF13350 Tyrosine phosphatase family NC3_17910 PF08220 DeoR-like helix-turn-helix domain NC3_17910 PF00455 DeoR C terminal sensor domain NC3_17920 PF14552 Tautomerase enzyme NC3_17940 PF13556 PucR C-terminal helix-turn-helix domain NC3_17940 PF17853 GGDEF-like domain NC3_17940 PF05651 Putative sugar diacid recognition NC3_17950 PF02913 FAD linked oxidases, C-terminal domain NC3_17950 PF01565 FAD binding domain NC3_17960 PF02754 Cysteine-rich domain NC3_17960 PF13183 4Fe-4S dicluster domain NC3_17970 PF03323 Bacillus/Clostridium GerA spore germination protein NC3_17980 PF03845 Spore germination protein NC3_18000 PF12728 Helix-turn-helix domain NC3_18010 PF04138 GtrA-like protein NC3_18020 PF00483 Nucleotidyl transferase NC3_18030 PF09335 SNARE associated Golgi protein NC3_18040 PF02602 Uroporphyrinogen-III synthase HemD NC3_18060 PF00296 Luciferase-like monooxygenase NC3_18100 PF01554 MatE NC3_18110 PF02113 D-Ala-D-Ala carboxypeptidase 3 (S13) family NC3_18120 PF01095 Pectinesterase NC3_18130 PF04239 Protein of unknown function (DUF421) NC3_18140 PF00355 Rieske [2Fe-2S] domain NC3_18150 PF18267 Rubredoxin NAD+ reductase C-terminal domain NC3_18150 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain NC3_18150 PF01077 Nitrite and sulphite reductase 4Fe-4S domain NC3_18150 PF07992 Pyridine nucleotide-disulphide oxidoreductase NC3_18150 PF04324 BFD-like [2Fe-2S] binding domain NC3_18160 PF01568 Molydopterin dinucleotide binding domain NC3_18160 PF04879 Molybdopterin oxidoreductase Fe4S4 domain NC3_18160 PF00384 Molybdopterin oxidoreductase NC3_18170 PF04324 BFD-like [2Fe-2S] binding domain NC3_18170 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain NC3_18170 PF07992 Pyridine nucleotide-disulphide oxidoreductase NC3_18170 PF18267 Rubredoxin NAD+ reductase C-terminal domain NC3_18180 PF07690 Major Facilitator Superfamily NC3_18190 PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster NC3_18190 PF07992 Pyridine nucleotide-disulphide oxidoreductase NC3_18200 PF00310 Glutamine amidotransferases class-II NC3_18200 PF04898 Glutamate synthase central domain NC3_18200 PF01645 Conserved region in glutamate synthase NC3_18200 PF01493 GXGXG motif NC3_18210 PF03466 LysR substrate binding domain NC3_18210 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family NC3_18220 PF00005 ABC transporter NC3_18220 PF00664 ABC transporter transmembrane region NC3_18230 PF00664 ABC transporter transmembrane region NC3_18230 PF00005 ABC transporter NC3_18240 PF06445 GyrI-like small molecule binding domain NC3_18240 PF13411 MerR HTH family regulatory protein NC3_18250 PF00583 Acetyltransferase (GNAT) family NC3_18260 PF00171 Aldehyde dehydrogenase family NC3_18270 PF00696 Amino acid kinase family NC3_18270 PF01472 PUA domain NC3_18280 PF03807 NADP oxidoreductase coenzyme F420-dependent NC3_18280 PF14748 Pyrroline-5-carboxylate reductase dimerisation NC3_18290 PF00067 Cytochrome P450 NC3_18300 PF01568 Molydopterin dinucleotide binding domain NC3_18300 PF04879 Molybdopterin oxidoreductase Fe4S4 domain NC3_18300 PF00384 Molybdopterin oxidoreductase NC3_18310 PF00457 Glycosyl hydrolases family 11 NC3_18320 PF02782 FGGY family of carbohydrate kinases, C-terminal domain NC3_18320 PF00370 FGGY family of carbohydrate kinases, N-terminal domain NC3_18330 PF01261 Xylose isomerase-like TIM barrel NC3_18340 PF00480 ROK family NC3_18350 PF17851 Beta xylosidase C-terminal Concanavalin A-like domain NC3_18350 PF04616 Glycosyl hydrolases family 43 NC3_18370 PF01588 Putative tRNA binding domain NC3_18390 PF14158 YndJ-like protein NC3_18400 PF13761 Domain of unknown function (DUF4166) NC3_18420 PF13305 Tetracyclin repressor-like, C-terminal domain NC3_18420 PF00440 Bacterial regulatory proteins, tetR family NC3_18430 PF00753 Metallo-beta-lactamase superfamily NC3_18440 PF06445 GyrI-like small molecule binding domain NC3_18450 PF08279 HTH domain NC3_18450 PF13280 WYL domain NC3_18470 PF01022 Bacterial regulatory protein, arsR family NC3_18480 PF00324 Amino acid permease NC3_18510 PF03972 MmgE/PrpD family NC3_18520 PF00285 Citrate synthase, C-terminal domain NC3_18530 PF04238 Protein of unknown function (DUF420) NC3_18550 PF06725 3D domain NC3_18550 PF01476 LysM domain NC3_18560 PF09382 RQC domain NC3_18560 PF16124 RecQ zinc-binding NC3_18560 PF00271 Helicase conserved C-terminal domain NC3_18560 PF00270 DEAD/DEAH box helicase NC3_18560 PF00570 HRDC domain NC3_18580 PF01258 Prokaryotic dksA/traR C4-type zinc finger NC3_18600 PF08000 Bacterial PH domain NC3_18630 PF00171 Aldehyde dehydrogenase family NC3_18640 PF13243 Squalene-hopene cyclase C-terminal domain NC3_18640 PF13249 Squalene-hopene cyclase N-terminal domain NC3_18650 PF02777 Iron/manganese superoxide dismutases, C-terminal domain NC3_18650 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain NC3_18660 PF01758 Sodium Bile acid symporter family NC3_18670 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) NC3_18670 PF02817 e3 binding domain NC3_18670 PF00364 Biotin-requiring enzyme NC3_18680 PF16078 2-oxoglutarate dehydrogenase N-terminus NC3_18680 PF00676 Dehydrogenase E1 component NC3_18680 PF16870 2-oxoglutarate dehydrogenase C-terminal NC3_18680 PF02779 Transketolase, pyrimidine binding domain NC3_18690 PF00092 von Willebrand factor type A domain NC3_18700 PF07728 AAA domain (dynein-related subfamily) NC3_18710 PF13627 Prokaryotic lipoprotein-attachment site NC3_18710 PF00080 Copper/zinc superoxide dismutase (SODC) NC3_18720 PF00877 NlpC/P60 family NC3_18720 PF01476 LysM domain NC3_18730 PF02457 DisA bacterial checkpoint controller nucleotide-binding NC3_18730 PF10372 Bacterial membrane-spanning protein N-terminus NC3_18750 PF01554 MatE NC3_18760 PF02585 GlcNAc-PI de-N-acetylase NC3_18770 PF08830 Protein of unknown function (DUF1806) NC3_18790 PF00892 EamA-like transporter family NC3_18820 PF01638 HxlR-like helix-turn-helix NC3_18830 PF00881 Nitroreductase family NC3_18840 PF11755 Protein of unknown function (DUF3311) NC3_18850 PF00474 Sodium:solute symporter family NC3_18860 PF03572 Peptidase family S41 NC3_18860 PF17820 PDZ domain NC3_18860 PF01471 Putative peptidoglycan binding domain NC3_18870 PF08241 Methyltransferase domain NC3_18890 PF02557 D-alanyl-D-alanine carboxypeptidase NC3_18900 PF01048 Phosphorylase superfamily NC3_18910 PF14191 YodL-like NC3_18920 PF01569 PAP2 superfamily NC3_18930 PF14162 YozD-like protein NC3_18960 PF06855 YozE SAM-like fold NC3_18970 PF14122 YokU-like protein, putative antitoxin NC3_18980 PF12544 Lysine-2,3-aminomutase NC3_18990 PF13426 PAS domain NC3_18990 PF00158 Sigma-54 interaction domain NC3_18990 PF02954 Bacterial regulatory protein, Fis family NC3_19000 PF00535 Glycosyl transferase family 2 NC3_19030 PF12996 DUF based on E. rectale Gene description (DUF3880) NC3_19050 PF02719 Polysaccharide biosynthesis protein NC3_19060 PF01641 SelR domain NC3_19070 PF01625 Peptide methionine sulfoxide reductase NC3_19080 PF01047 MarR family NC3_19110 PF17431 Uncharacterized YmpT-like NC3_19120 PF09911 Uncharacterized protein conserved in bacteria (DUF2140) NC3_19130 PF13472 GDSL-like Lipase/Acylhydrolase family NC3_19140 PF02630 SCO1/SenC NC3_19150 PF02645 Uncharacterised protein, DegV family COG1307 NC3_19160 PF10751 Protein of unknown function (DUF2535) NC3_19170 PF00291 Pyridoxal-phosphate dependent enzyme NC3_19170 PF00585 C-terminal regulatory domain of Threonine dehydratase NC3_19180 PF08461 Ribonuclease R winged-helix domain NC3_19180 PF00158 Sigma-54 interaction domain NC3_19190 PF03006 Haemolysin-III related NC3_19210 PF00186 Dihydrofolate reductase NC3_19220 PF00303 Thymidylate synthase NC3_19230 PF04608 Phosphatidylglycerophosphatase A NC3_19240 PF14005 YpjP-like protein NC3_19250 PF04445 Putative SAM-dependent methyltransferase NC3_19260 PF06491 Disulphide isomerase NC3_19270 PF00920 Dehydratase family NC3_19280 PF08712 Scaffold protein Nfu/NifU N terminal NC3_19280 PF13769 Virulence factor NC3_19290 PF01966 HD domain NC3_19300 PF00255 Glutathione peroxidase NC3_19310 PF01268 Formate--tetrahydrofolate ligase NC3_19320 PF04204 Homoserine O-succinyltransferase NC3_19330 PF00534 Glycosyl transferases group 1 NC3_19330 PF06925 Monogalactosyldiacylglycerol (MGDG) synthase NC3_19350 PF00313 'Cold-shock' DNA-binding domain NC3_19370 PF10782 Zinc-finger NC3_19380 PF13456 Reverse transcriptase-like NC3_19390 PF02592 Putative vitamin uptake transporter NC3_19400 PF13456 Reverse transcriptase-like NC3_19410 PF01367 5'-3' exonuclease, C-terminal SAM fold NC3_19410 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain NC3_19440 PF00350 Dynamin family NC3_19450 PF04140 Isoprenylcysteine carboxyl methyltransferase (ICMT) family NC3_19460 PF00195 Chalcone and stilbene synthases, N-terminal domain NC3_19460 PF02797 Chalcone and stilbene synthases, C-terminal domain NC3_19470 PF13673 Acetyltransferase (GNAT) domain NC3_19470 PF04229 GrpB protein NC3_19490 PF01522 Polysaccharide deacetylase NC3_19500 PF00860 Permease family NC3_19520 PF02074 Carboxypeptidase Taq (M32) metallopeptidase NC3_19530 PF13307 Helicase C-terminal domain NC3_19550 PF02926 THUMP domain NC3_19550 PF01170 Putative RNA methylase family UPF0020 NC3_19560 PF05103 DivIVA protein NC3_19570 PF06908 YspA SLOG family NC3_19580 PF13482 RNase_H superfamily NC3_19590 PF00270 DEAD/DEAH box helicase NC3_19590 PF09369 Domain of unknown function (DUF1998) NC3_19590 PF00271 Helicase conserved C-terminal domain NC3_19600 PF00724 NADH:flavin oxidoreductase / NADH oxidase family NC3_19610 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 NC3_19630 PF14179 YppG-like protein NC3_19660 PF10720 Protein of unknown function (DUF2515) NC3_19670 PF03838 Recombination protein U NC3_19680 PF00905 Penicillin binding protein transpeptidase domain NC3_19680 PF00912 Transglycosylase NC3_19700 PF00633 Helix-hairpin-helix motif NC3_19700 PF00730 HhH-GPD superfamily base excision DNA repair protein NC3_19700 PF10576 Iron-sulfur binding domain of endonuclease III NC3_19710 PF07261 Replication initiation and membrane attachment NC3_19720 PF00152 tRNA synthetases class II (D, K and N) NC3_19720 PF01336 OB-fold nucleic acid binding domain NC3_19730 PF17881 Domain of unknown function (DUF5590) NC3_19730 PF03413 Peptidase propeptide and YPEB domain NC3_19740 PF14084 Protein of unknown function (DUF4264) NC3_19750 PF00929 Exonuclease NC3_19750 PF13307 Helicase C-terminal domain NC3_19750 PF04851 Type III restriction enzyme, res subunit NC3_19760 PF02261 Aspartate decarboxylase NC3_19770 PF02569 Pantoate-beta-alanine ligase NC3_19780 PF02548 Ketopantoate hydroxymethyltransferase NC3_19790 PF02237 Biotin protein ligase C terminal domain NC3_19790 PF03099 Biotin/lipoate A/B protein ligase family NC3_19790 PF08279 HTH domain NC3_19800 PF01743 Poly A polymerase head domain NC3_19800 PF12627 Probable RNA and SrmB- binding site of polymerase A NC3_19800 PF13735 tRNA nucleotidyltransferase domain 2 putative NC3_19810 PF13439 Glycosyltransferase Family 4 NC3_19810 PF00534 Glycosyl transferases group 1 NC3_19820 PF02585 GlcNAc-PI de-N-acetylase NC3_19830 PF02142 MGS-like domain NC3_19840 PF05173 Dihydrodipicolinate reductase, C-terminus NC3_19840 PF01113 Dihydrodipicolinate reductase, N-terminus NC3_19850 PF03819 MazG nucleotide pyrophosphohydrolase domain NC3_19860 PF10035 Uncharacterized protein conserved in bacteria (DUF2179) NC3_19860 PF02588 Uncharacterised 5xTM membrane BCR, YitT family COG1284 NC3_19870 PF09577 Sporulation protein YpjB (SpoYpjB) NC3_19880 PF07187 Protein of unknown function (DUF1405) NC3_19890 PF00032 Cytochrome b(C-terminal)/b6/petD NC3_19890 PF13442 Cytochrome C oxidase, cbb3-type, subunit III NC3_19900 PF00033 Cytochrome b/b6/petB NC3_19910 PF00355 Rieske [2Fe-2S] domain NC3_19920 PF10673 Protein of unknown function (DUF2487) NC3_19930 PF08858 IDEAL domain NC3_19930 PF08864 UPF0302 domain NC3_19950 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) NC3_19960 PF02153 Prephenate dehydrogenase NC3_19960 PF01842 ACT domain NC3_19970 PF00155 Aminotransferase class I and II NC3_19980 PF00290 Tryptophan synthase alpha chain NC3_19990 PF00291 Pyridoxal-phosphate dependent enzyme NC3_20000 PF00697 N-(5'phosphoribosyl)anthranilate (PRA) isomerase NC3_20010 PF00218 Indole-3-glycerol phosphate synthase NC3_20020 PF00591 Glycosyl transferase family, a/b domain NC3_20020 PF02885 Glycosyl transferase family, helical bundle domain NC3_20030 PF00425 chorismate binding enzyme NC3_20030 PF04715 Anthranilate synthase component I, N terminal region NC3_20040 PF07736 Chorismate mutase type I NC3_20050 PF01761 3-dehydroquinate synthase NC3_20060 PF01264 Chorismate synthase NC3_20070 PF01739 CheR methyltransferase, SAM binding domain NC3_20070 PF03705 CheR methyltransferase, all-alpha domain NC3_20080 PF00334 Nucleoside diphosphate kinase NC3_20090 PF00348 Polyprenyl synthetase NC3_20100 PF01209 ubiE/COQ5 methyltransferase family NC3_20110 PF07307 Heptaprenyl diphosphate synthase (HEPPP synthase) subunit 1 NC3_20120 PF02081 Tryptophan RNA-binding attenuator protein NC3_20130 PF01227 GTP cyclohydrolase I NC3_20140 PF00216 Bacterial DNA-binding protein NC3_20150 PF09547 Stage IV sporulation protein A (spore_IV_A) NC3_20170 PF10966 Protein of unknown function (DUF2768) NC3_20180 PF07479 NAD-dependent glycerol-3-phosphate dehydrogenase C-terminus NC3_20180 PF01210 NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus NC3_20190 PF01926 50S ribosome-binding GTPase NC3_20190 PF14714 KH-domain-like of EngA bacterial GTPase enzymes, C-terminal NC3_20210 PF14045 YIEGIA protein NC3_20230 PF14140 YpzI-like protein NC3_20240 PF01070 FMN-dependent dehydrogenase NC3_20250 PF00575 S1 RNA binding domain NC3_20260 PF02224 Cytidylate kinase NC3_20270 PF17313 Family of unknown function (DUF5359) NC3_20280 PF07238 PilZ domain NC3_20280 PF12945 Flagellar protein YcgR NC3_20290 PF03413 Peptidase propeptide and YPEB domain NC3_20290 PF14620 YpeB sporulation NC3_20300 PF01471 Putative peptidoglycan binding domain NC3_20300 PF07486 Cell Wall Hydrolase NC3_20310 PF13367 PrsW family intramembrane metalloprotease NC3_20330 PF02812 Glu/Leu/Phe/Val dehydrogenase, dimerisation domain NC3_20330 PF00208 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase NC3_20340 PF05389 Negative regulator of genetic competence (MecA) NC3_20350 PF00149 Calcineurin-like phosphoesterase NC3_20360 PF10864 Protein of unknown function (DUF2663) NC3_20370 PF01476 LysM domain NC3_20380 PF02517 CPBP intramembrane metalloprotease NC3_20390 PF00271 Helicase conserved C-terminal domain NC3_20390 PF00270 DEAD/DEAH box helicase NC3_20400 PF14493 Helix-turn-helix domain NC3_20420 PF12822 ECF transporter, substrate-specific component NC3_20430 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain NC3_20430 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain NC3_20430 PF01842 ACT domain NC3_20440 PF01476 LysM domain NC3_20440 PF01551 Peptidase family M23 NC3_20460 PF04542 Sigma-70 region 2 NC3_20460 PF08281 Sigma-70, region 4 NC3_20470 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase NC3_20470 PF00989 PAS fold NC3_20470 PF00672 HAMP domain NC3_20470 PF18698 Histidine kinase sensor domain NC3_20470 PF00512 His Kinase A (phospho-acceptor) domain NC3_20480 PF00072 Response regulator receiver domain NC3_20480 PF00486 Transcriptional regulatory protein, C terminal NC3_20490 PF01578 Cytochrome C assembly protein NC3_20500 PF05140 ResB-like family NC3_20510 PF00578 AhpC/TSA family NC3_20520 PF01479 S4 domain NC3_20520 PF00849 RNA pseudouridylate synthase NC3_20530 PF07670 Nucleoside recognition NC3_20540 PF07670 Nucleoside recognition NC3_20550 PF07943 Penicillin-binding protein 5, C-terminal domain NC3_20550 PF00768 D-alanyl-D-alanine carboxypeptidase NC3_20560 PF13047 Protein of unknown function (DUF3907) NC3_20570 PF04079 Segregation and condensation complex subunit ScpB NC3_20580 PF02616 Segregation and condensation protein ScpA NC3_20600 PF03745 Domain of unknown function (DUF309) NC3_20610 PF00583 Acetyltransferase (GNAT) family NC3_20620 PF00885 6,7-dimethyl-8-ribityllumazine synthase NC3_20630 PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase NC3_20630 PF00925 GTP cyclohydrolase II NC3_20640 PF00677 Lumazine binding domain NC3_20680 PF07690 Major Facilitator Superfamily NC3_20690 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD NC3_20700 PF06207 Protein of unknown function (DUF1002) NC3_20710 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain NC3_20710 PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain NC3_20720 PF03323 Bacillus/Clostridium GerA spore germination protein NC3_20730 PF14097 Stage V sporulation protein AE1 NC3_20740 PF03862 SpoVAC/SpoVAEB sporulation membrane protein NC3_20750 PF07451 Stage V sporulation protein AD (SpoVAD) NC3_20760 PF03862 SpoVAC/SpoVAEB sporulation membrane protein NC3_20770 PF13782 Stage V sporulation protein AB NC3_20780 PF12164 Stage V sporulation protein AA NC3_20790 PF04542 Sigma-70 region 2 NC3_20790 PF04539 Sigma-70 region 3 NC3_20790 PF04545 Sigma-70, region 4 NC3_20800 PF13581 Histidine kinase-like ATPase domain NC3_20810 PF01740 STAS domain NC3_20820 PF07943 Penicillin-binding protein 5, C-terminal domain NC3_20820 PF00768 D-alanyl-D-alanine carboxypeptidase NC3_20830 PF01048 Phosphorylase superfamily NC3_20840 PF01676 Metalloenzyme superfamily NC3_20850 PF02899 Phage integrase, N-terminal SAM-like domain NC3_20850 PF00589 Phage integrase family NC3_20860 PF14004 Protein of unknown function (DUF4227) NC3_20870 PF01475 Ferric uptake regulator family NC3_20880 PF01944 Stage II sporulation protein M NC3_20890 PF05922 Peptidase inhibitor I9 NC3_20890 PF00082 Subtilase family NC3_20910 PF13673 Acetyltransferase (GNAT) domain NC3_20930 PF00293 NUDIX domain NC3_20940 PF00248 Aldo/keto reductase family NC3_20960 PF12146 Serine aminopeptidase, S33 NC3_20970 PF18801 response regulator aspartate phosphatase H, N terminal NC3_20980 PF10827 Protein of unknown function (DUF2552) NC3_20990 PF01521 Iron-sulphur cluster biosynthesis NC3_21000 PF03330 Lytic transglycolase NC3_21010 PF04229 GrpB protein NC3_21010 PF13673 Acetyltransferase (GNAT) domain NC3_21020 PF00583 Acetyltransferase (GNAT) family NC3_21030 PF10787 Uncharacterised protein from bacillus cereus group NC3_21040 PF00817 impB/mucB/samB family NC3_21040 PF11799 impB/mucB/samB family C-terminal domain NC3_21050 PF08863 YolD-like protein NC3_21060 PF07690 Major Facilitator Superfamily NC3_21070 PF00485 Phosphoribulokinase / Uridine kinase family NC3_21080 PF07992 Pyridine nucleotide-disulphide oxidoreductase NC3_21080 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain NC3_21100 PF00106 short chain dehydrogenase NC3_21110 PF00753 Metallo-beta-lactamase superfamily NC3_21120 PF03807 NADP oxidoreductase coenzyme F420-dependent NC3_21120 PF14748 Pyrroline-5-carboxylate reductase dimerisation NC3_21140 PF01546 Peptidase family M20/M25/M40 NC3_21150 PF00724 NADH:flavin oxidoreductase / NADH oxidase family NC3_21160 PF12146 Serine aminopeptidase, S33 NC3_21170 PF12897 Alanine-glyoxylate amino-transferase NC3_21180 PF12706 Beta-lactamase superfamily domain NC3_21190 PF02781 Glucose-6-phosphate dehydrogenase, C-terminal domain NC3_21190 PF00479 Glucose-6-phosphate dehydrogenase, NAD binding domain NC3_21200 PF00392 Bacterial regulatory proteins, gntR family NC3_21200 PF07702 UTRA domain NC3_21210 PF00232 Glycosyl hydrolase family 1 NC3_21220 PF02378 Phosphotransferase system, EIIC NC3_21230 PF02255 PTS system, Lactose/Cellobiose specific IIA subunit NC3_21240 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit NC3_21270 PF06800 Sugar transport protein NC3_21280 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase NC3_21280 PF00393 6-phosphogluconate dehydrogenase, C-terminal domain NC3_21290 PF00817 impB/mucB/samB family NC3_21290 PF11798 IMS family HHH motif NC3_21290 PF11799 impB/mucB/samB family C-terminal domain NC3_21310 PF02096 60Kd inner membrane protein NC3_21320 PF01584 CheW-like domain NC3_21330 PF07687 Peptidase dimerisation domain NC3_21330 PF01546 Peptidase family M20/M25/M40 NC3_21340 PF01039 Carboxyl transferase domain NC3_21360 PF03734 L,D-transpeptidase catalytic domain NC3_21370 PF06081 Aromatic acid exporter family member 1 NC3_21370 PF11728 Putative aromatic acid exporter C-terminal domain NC3_21380 PF00005 ABC transporter NC3_21390 PF00528 Binding-protein-dependent transport system inner membrane component NC3_21400 PF00497 Bacterial extracellular solute-binding proteins, family 3 NC3_21410 PF06491 Disulphide isomerase NC3_21420 PF00781 Diacylglycerol kinase catalytic domain NC3_21440 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) NC3_21440 PF00364 Biotin-requiring enzyme NC3_21440 PF02817 e3 binding domain NC3_21450 PF02779 Transketolase, pyrimidine binding domain NC3_21450 PF02780 Transketolase, C-terminal domain NC3_21460 PF00676 Dehydrogenase E1 component NC3_21470 PF07992 Pyridine nucleotide-disulphide oxidoreductase NC3_21470 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain NC3_21480 PF00871 Acetokinase family NC3_21490 PF00208 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase NC3_21490 PF02812 Glu/Leu/Phe/Val dehydrogenase, dimerisation domain NC3_21500 PF01515 Phosphate acetyl/butaryl transferase NC3_21510 PF02954 Bacterial regulatory protein, Fis family NC3_21510 PF00989 PAS fold NC3_21510 PF00158 Sigma-54 interaction domain NC3_21520 PF11118 Protein of unknown function (DUF2627) NC3_21530 PF03009 Glycerophosphoryl diester phosphodiesterase family NC3_21540 PF18801 response regulator aspartate phosphatase H, N terminal NC3_21550 PF08769 Sporulation initiation factor Spo0A C terminal NC3_21550 PF00072 Response regulator receiver domain NC3_21560 PF17820 PDZ domain NC3_21560 PF05580 SpoIVB peptidase S55 NC3_21570 PF13476 AAA domain NC3_21580 PF01316 Arginine repressor, DNA binding domain NC3_21580 PF02863 Arginine repressor, C-terminal domain NC3_21590 PF01728 FtsJ-like methyltransferase NC3_21590 PF01479 S4 domain NC3_21600 PF02780 Transketolase, C-terminal domain NC3_21600 PF02779 Transketolase, pyrimidine binding domain NC3_21600 PF13292 1-deoxy-D-xylulose-5-phosphate synthase NC3_21610 PF00348 Polyprenyl synthetase NC3_21620 PF02609 Exonuclease VII small subunit NC3_21630 PF02601 Exonuclease VII, large subunit NC3_21630 PF13742 OB-fold nucleic acid binding domain NC3_21640 PF00763 Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain NC3_21640 PF02882 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain NC3_21650 PF01029 NusB family NC3_21660 PF03780 Asp23 family, cell envelope-related function NC3_21670 PF02785 Biotin carboxylase C-terminal domain NC3_21670 PF00289 Biotin carboxylase, N-terminal domain NC3_21670 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain NC3_21680 PF00364 Biotin-requiring enzyme NC3_21690 PF12685 SpoIIIAH-like protein NC3_21710 PF09581 Stage III sporulation protein AF (Spore_III_AF) NC3_21720 PF09546 Stage III sporulation protein AE (spore_III_AE) NC3_21730 PF06686 Stage III sporulation protein AC/AD protein family NC3_21740 PF06686 Stage III sporulation protein AC/AD protein family NC3_21750 PF09548 Stage III sporulation protein AB (spore_III_AB) NC3_21770 PF10942 Protein of unknown function (DUF2619) NC3_21780 PF01132 Elongation factor P (EF-P) OB domain NC3_21780 PF08207 Elongation factor P (EF-P) KOW-like domain NC3_21780 PF09285 Elongation factor P, C-terminal NC3_21790 PF00557 Metallopeptidase family M24 NC3_21790 PF01321 Creatinase/Prolidase N-terminal domain NC3_21800 PF01220 Dehydroquinase class II NC3_21810 PF11085 Conserved membrane protein YqhR NC3_21820 PF07136 Protein of unknown function (DUF1385) NC3_21840 PF01734 Patatin-like phospholipase NC3_21850 PF02742 Iron dependent repressor, metal binding and dimerisation domain NC3_21850 PF01325 Iron dependent repressor, N-terminal DNA binding domain NC3_21860 PF03099 Biotin/lipoate A/B protein ligase family NC3_21870 PF00581 Rhodanese-like domain NC3_21880 PF02347 Glycine cleavage system P-protein NC3_21890 PF02347 Glycine cleavage system P-protein NC3_21900 PF01571 Aminomethyltransferase folate-binding domain NC3_21900 PF08669 Glycine cleavage T-protein C-terminal barrel domain NC3_21910 PF00271 Helicase conserved C-terminal domain NC3_21910 PF00176 SNF2 family N-terminal domain NC3_21920 PF11079 Bacterial protein YqhG of unknown function NC3_21940 PF01381 Helix-turn-helix NC3_21940 PF08671 Anti-repressor SinI NC3_21950 PF12389 Camelysin metallo-endopeptidase NC3_21980 PF13028 Protein of unknown function (DUF3889) NC3_21990 PF14038 YqzE-like protein NC3_22030 PF07963 Prokaryotic N-terminal methylation motif NC3_22040 PF07963 Prokaryotic N-terminal methylation motif NC3_22050 PF00482 Type II secretion system (T2SS), protein F NC3_22060 PF00437 Type II/IV secretion system protein NC3_22070 PF14361 RsbT co-antagonist protein rsbRD N-terminal domain NC3_22070 PF01740 STAS domain NC3_22080 PF03960 ArsC family NC3_22090 PF11117 Protein of unknown function (DUF2626) NC3_22100 PF00753 Metallo-beta-lactamase superfamily NC3_22110 PF10958 Protein of unknown function (DUF2759) NC3_22120 PF01910 Thiamine-binding protein NC3_22130 PF07690 Major Facilitator Superfamily NC3_22140 PF00246 Zinc carboxypeptidase NC3_22150 PF00884 Sulfatase NC3_22160 PF00480 ROK family NC3_22170 PF06014 Bacterial protein of unknown function (DUF910) NC3_22180 PF01694 Rhomboid family NC3_22210 PF01812 5-formyltetrahydrofolate cyclo-ligase family NC3_22220 PF00471 Ribosomal protein L33 NC3_22260 PF00005 ABC transporter NC3_22270 PF00005 ABC transporter NC3_22280 PF00528 Binding-protein-dependent transport system inner membrane component NC3_22290 PF00528 Binding-protein-dependent transport system inner membrane component NC3_22300 PF12849 PBP superfamily domain NC3_22310 PF00905 Penicillin binding protein transpeptidase domain NC3_22310 PF03717 Penicillin-binding Protein dimerisation domain NC3_22320 PF07690 Major Facilitator Superfamily NC3_22330 PF02777 Iron/manganese superoxide dismutases, C-terminal domain NC3_22330 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain NC3_22340 PF04306 Protein of unknown function (DUF456) NC3_22350 PF06691 Protein of unknown function (DUF1189) NC3_22360 PF13302 Acetyltransferase (GNAT) domain NC3_22380 PF04551 GcpE protein NC3_22410 PF00480 ROK family NC3_22420 PF01475 Ferric uptake regulator family NC3_22430 PF00950 ABC 3 transport family NC3_22440 PF00005 ABC transporter NC3_22450 PF10035 Uncharacterized protein conserved in bacteria (DUF2179) NC3_22450 PF02588 Uncharacterised 5xTM membrane BCR, YitT family COG1284 NC3_22460 PF11116 Protein of unknown function (DUF2624) NC3_22470 PF01261 Xylose isomerase-like TIM barrel NC3_22480 PF00270 DEAD/DEAH box helicase NC3_22480 PF00271 Helicase conserved C-terminal domain NC3_22500 PF02401 LytB protein NC3_22510 PF01784 NIF3 (NGG1p interacting factor 3) NC3_22520 PF04816 tRNA (adenine(22)-N(1))-methyltransferase NC3_22530 PF13442 Cytochrome C oxidase, cbb3-type, subunit III NC3_22540 PF03979 Sigma-70 factor, region 1.1 NC3_22540 PF00140 Sigma-70 factor, region 1.2 NC3_22540 PF04542 Sigma-70 region 2 NC3_22540 PF04545 Sigma-70, region 4 NC3_22540 PF04539 Sigma-70 region 3 NC3_22550 PF10410 DnaB-helicase binding domain of primase NC3_22550 PF08275 DNA primase catalytic core, N-terminal domain NC3_22550 PF01807 CHC2 zinc finger NC3_22560 PF02639 Uncharacterized BCR, YaiI/YqxD family COG1671 NC3_22570 PF03618 Kinase/pyrophosphorylase NC3_22580 PF00571 CBS domain NC3_22580 PF08279 HTH domain NC3_22590 PF02092 Glycyl-tRNA synthetase beta subunit NC3_22600 PF02091 Glycyl-tRNA synthetase alpha subunit NC3_22610 PF02565 Recombination protein O C terminal NC3_22610 PF11967 Recombination protein O N terminal NC3_22620 PF14006 YqzL-like protein NC3_22630 PF07650 KH domain NC3_22630 PF01926 50S ribosome-binding GTPase NC3_22640 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region NC3_22650 PF01219 Prokaryotic diacylglycerol kinase NC3_22660 PF02130 Uncharacterized protein family UPF0054 NC3_22670 PF07698 7TM receptor with intracellular HD hydrolase NC3_22670 PF07697 7TM-HD extracellular NC3_22670 PF01966 HD domain NC3_22680 PF02562 PhoH-like protein NC3_22690 PF06898 Putative stage IV sporulation protein YqfD NC3_22700 PF07873 YabP family NC3_22720 PF12127 SigmaW regulon antibacterial NC3_22730 PF01957 NfeD-like C-terminal, partner-binding NC3_22730 PF01972 Serine dehydrogenase proteinase NC3_22740 PF09424 Yqey-like protein NC3_22750 PF01165 Ribosomal protein S21 NC3_22760 PF02690 Na+/Pi-cotransporter NC3_22770 PF04055 Radical SAM superfamily NC3_22770 PF01938 TRAM domain NC3_22770 PF00919 Uncharacterized protein family UPF0004 NC3_22780 PF04452 RNA methyltransferase NC3_22800 PF00226 DnaJ domain NC3_22800 PF00684 DnaJ central domain NC3_22800 PF01556 DnaJ C terminal domain NC3_22810 PF00012 Hsp70 protein NC3_22820 PF01025 GrpE NC3_22830 PF01628 HrcA protein C terminal domain NC3_22840 PF04055 Radical SAM superfamily NC3_22840 PF06969 HemN C-terminal domain NC3_22850 PF06421 GTP-binding protein LepA C-terminus NC3_22850 PF03144 Elongation factor Tu domain 2 NC3_22850 PF00009 Elongation factor Tu GTP binding domain NC3_22850 PF00679 Elongation factor G C-terminus NC3_22860 PF12438 Protein of unknown function (DUF3679) NC3_22870 PF07454 Stage II sporulation protein P (SpoIIP) NC3_22880 PF03418 Germination protease NC3_22890 PF01649 Ribosomal protein S20 NC3_22900 PF06144 DNA polymerase III, delta subunit NC3_22910 PF14141 YqzM-like protein NC3_22920 PF03772 Competence protein NC3_22920 PF13567 Domain of unknown function (DUF4131) NC3_22920 PF00753 Metallo-beta-lactamase superfamily NC3_22930 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region NC3_22940 PF10531 SLBB domain NC3_22950 PF03807 NADP oxidoreductase coenzyme F420-dependent NC3_22950 PF14748 Pyrroline-5-carboxylate reductase dimerisation NC3_22960 PF13649 Methyltransferase domain NC3_22980 PF01966 HD domain NC3_22990 PF01467 Cytidylyltransferase-like NC3_23000 PF01985 CRS1 / YhbY (CRM) domain NC3_23010 PF18317 Shikimate 5'-dehydrogenase C-terminal domain NC3_23010 PF01488 Shikimate / quinate 5-dehydrogenase NC3_23010 PF08501 Shikimate dehydrogenase substrate binding domain NC3_23020 PF01926 50S ribosome-binding GTPase NC3_23050 PF00657 GDSL-like Lipase/Acylhydrolase NC3_23060 PF01522 Polysaccharide deacetylase NC3_23070 PF13176 Tetratricopeptide repeat NC3_23070 PF18801 response regulator aspartate phosphatase H, N terminal NC3_23080 PF04542 Sigma-70 region 2 NC3_23080 PF04545 Sigma-70, region 4 NC3_23100 PF00392 Bacterial regulatory proteins, gntR family NC3_23100 PF07729 FCD domain NC3_23120 PF07690 Major Facilitator Superfamily NC3_23140 PF02779 Transketolase, pyrimidine binding domain NC3_23140 PF02780 Transketolase, C-terminal domain NC3_23150 PF00456 Transketolase, thiamine diphosphate binding domain NC3_23180 PF13344 Haloacid dehalogenase-like hydrolase NC3_23180 PF00293 NUDIX domain NC3_23190 PF11738 Protein of unknown function (DUF3298) NC3_23190 PF13739 Deacetylase PdaC NC3_23190 PF01522 Polysaccharide deacetylase NC3_23220 PF09221 Bacteriocin class IId cyclical uberolysin-like NC3_23260 PF00005 ABC transporter NC3_23300 PF00083 Sugar (and other) transporter NC3_23310 PF02610 L-arabinose isomerase NC3_23310 PF11762 L-arabinose isomerase C-terminal domain NC3_23320 PF00596 Class II Aldolase and Adducin N-terminal domain NC3_23340 PF00392 Bacterial regulatory proteins, gntR family NC3_23360 PF01047 MarR family NC3_23380 PF01380 SIS domain NC3_23390 PF00215 Orotidine 5'-phosphate decarboxylase / HUMPS family NC3_23400 PF01638 HxlR-like helix-turn-helix NC3_23410 PF07859 alpha/beta hydrolase fold NC3_23430 PF14176 YxiJ-like protein NC3_23460 PF05593 RHS Repeat NC3_23470 PF00905 Penicillin binding protein transpeptidase domain NC3_23480 PF02771 Acyl-CoA dehydrogenase, N-terminal domain NC3_23480 PF02770 Acyl-CoA dehydrogenase, middle domain NC3_23480 PF08028 Acyl-CoA dehydrogenase, C-terminal domain NC3_23490 PF00005 ABC transporter NC3_23500 PF00497 Bacterial extracellular solute-binding proteins, family 3 NC3_23510 PF00528 Binding-protein-dependent transport system inner membrane component NC3_23520 PF00528 Binding-protein-dependent transport system inner membrane component NC3_23530 PF05067 Manganese containing catalase NC3_23540 PF08240 Alcohol dehydrogenase GroES-like domain NC3_23540 PF00107 Zinc-binding dehydrogenase NC3_23570 PF00465 Iron-containing alcohol dehydrogenase NC3_23580 PF01235 Sodium:alanine symporter family NC3_23590 PF03466 LysR substrate binding domain NC3_23590 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family NC3_23620 PF00005 ABC transporter NC3_23630 PF08240 Alcohol dehydrogenase GroES-like domain NC3_23630 PF00107 Zinc-binding dehydrogenase NC3_23640 PF08241 Methyltransferase domain NC3_23670 PF09501 Probable sporulation protein (Bac_small_yrzI) NC3_23680 PF14143 YrhC-like protein NC3_23690 PF01053 Cys/Met metabolism PLP-dependent enzyme NC3_23700 PF00291 Pyridoxal-phosphate dependent enzyme NC3_23710 PF01048 Phosphorylase superfamily NC3_23720 PF13649 Methyltransferase domain NC3_23730 PF10750 Protein of unknown function (DUF2536) NC3_23740 PF07423 Domain of unknown function (DUF1510) NC3_23750 PF03717 Penicillin-binding Protein dimerisation domain NC3_23750 PF00905 Penicillin binding protein transpeptidase domain NC3_23760 PF01272 Transcription elongation factor, GreA/GreB, C-term NC3_23760 PF03449 Transcription elongation factor, N-terminal NC3_23770 PF00485 Phosphoribulokinase / Uridine kinase family NC3_23780 PF16325 Peptidase family U32 C-terminal domain NC3_23780 PF01136 Peptidase family U32 NC3_23790 PF01136 Peptidase family U32 NC3_23800 PF01596 O-methyltransferase NC3_23810 PF02618 YceG-like family NC3_23820 PF02803 Thiolase, C-terminal domain NC3_23820 PF00108 Thiolase, N-terminal domain NC3_23830 PF00501 AMP-binding enzyme NC3_23830 PF13193 AMP-binding enzyme C-terminal domain NC3_23840 PF02632 BioY family NC3_23860 PF06949 Protein of unknown function (DUF1292) NC3_23870 PF03652 Holliday junction resolvase NC3_23880 PF06135 IreB regulatory phosphoprotein NC3_23890 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain NC3_23890 PF02272 DHHA1 domain NC3_23890 PF01411 tRNA synthetases class II (A) NC3_23900 PF01594 AI-2E family transporter NC3_23910 PF00005 ABC transporter NC3_23920 PF00497 Bacterial extracellular solute-binding proteins, family 3 NC3_23930 PF00528 Binding-protein-dependent transport system inner membrane component NC3_23940 PF00528 Binding-protein-dependent transport system inner membrane component NC3_23950 PF13056 Protein of unknown function (DUF3918) NC3_23970 PF05239 PRC-barrel domain NC3_23980 PF18335 ATP-dependent RecD-like DNA helicase SH3 domain NC3_23980 PF13538 UvrD-like helicase C-terminal domain NC3_23980 PF14490 Helix-hairpin-helix containing domain NC3_23990 PF07719 Tetratricopeptide repeat NC3_23990 PF13181 Tetratricopeptide repeat NC3_24010 PF00266 Aminotransferase class-V NC3_24020 PF02082 Transcriptional regulator NC3_24030 PF16193 AAA C-terminal domain NC3_24030 PF12002 MgsA AAA+ ATPase C terminal NC3_24030 PF05496 Holliday junction DNA helicase RuvB P-loop domain NC3_24040 PF00899 ThiF family NC3_24050 PF00152 tRNA synthetases class II (D, K and N) NC3_24050 PF01336 OB-fold nucleic acid binding domain NC3_24050 PF02938 GAD domain NC3_24060 PF03129 Anticodon binding domain NC3_24060 PF13393 Histidyl-tRNA synthetase NC3_24080 PF01520 N-acetylmuramoyl-L-alanine amidase NC3_24080 PF08239 Bacterial SH3 domain NC3_24090 PF02580 D-Tyr-tRNA(Tyr) deacylase NC3_24100 PF13291 ACT domain NC3_24100 PF02824 TGS domain NC3_24100 PF04607 Region found in RelA / SpoT proteins NC3_24110 PF00156 Phosphoribosyl transferase domain NC3_24120 PF01368 DHH family NC3_24120 PF02272 DHHA1 domain NC3_24120 PF17768 RecJ OB domain NC3_24120 PF10141 Single-strand DNA-specific exonuclease, C terminal domain NC3_24130 PF06305 Lipopolysaccharide assembly protein A domain NC3_24140 PF02080 TrkA-C domain NC3_24150 PF07549 SecD/SecF GG Motif NC3_24150 PF02355 Protein export membrane protein NC3_24160 PF13797 Post-transcriptional regulator NC3_24170 PF14667 Polysaccharide biosynthesis C-terminal domain NC3_24170 PF01943 Polysaccharide biosynthesis protein NC3_24180 PF04239 Protein of unknown function (DUF421) NC3_24190 PF12670 Protein of unknown function (DUF3792) NC3_24200 PF02699 Preprotein translocase subunit NC3_24210 PF01702 Queuine tRNA-ribosyltransferase NC3_24220 PF02547 Queuosine biosynthesis protein NC3_24230 PF11146 Protein of unknown function (DUF2905) NC3_24240 PF05491 RuvB C-terminal winged helix domain NC3_24240 PF05496 Holliday junction DNA helicase RuvB P-loop domain NC3_24240 PF17864 RuvB AAA lid domain NC3_24250 PF07499 RuvA, C-terminal domain NC3_24250 PF01330 RuvA N terminal domain NC3_24260 PF08955 BofC C-terminal domain NC3_24260 PF08977 Bypass of Forespore C, N terminal NC3_24300 PF13667 ThiC-associated domain NC3_24300 PF01964 Radical SAM ThiC family NC3_24320 PF09580 Sporulation lipoprotein YhcN/YlaJ (Spore_YhcN_YlaJ) NC3_24330 PF01476 LysM domain NC3_24340 PF02445 Quinolinate synthetase A protein NC3_24350 PF01729 Quinolinate phosphoribosyl transferase, C-terminal domain NC3_24350 PF02749 Quinolinate phosphoribosyl transferase, N-terminal domain NC3_24360 PF00890 FAD binding domain NC3_24360 PF02910 Fumarate reductase flavoprotein C-term NC3_24370 PF00266 Aminotransferase class-V NC3_24380 PF02829 3H domain NC3_24380 PF08279 HTH domain NC3_24390 PF01842 ACT domain NC3_24390 PF00800 Prephenate dehydratase NC3_24400 PF01842 ACT domain NC3_24410 PF09269 Domain of unknown function (DUF1967) NC3_24410 PF01018 GTP1/OBG NC3_24410 PF01926 50S ribosome-binding GTPase NC3_24420 PF14682 Sporulation initiation phospho-transferase B, C-terminal NC3_24420 PF14689 Sensor_kinase_SpoOB-type, alpha-helical domain NC3_24430 PF01016 Ribosomal L27 protein NC3_24440 PF04327 Cysteine protease Prp NC3_24450 PF00829 Ribosomal prokaryotic L21 protein NC3_24460 PF02163 Peptidase family M50 NC3_24470 PF01551 Peptidase family M23 NC3_24480 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain NC3_24490 PF03775 Septum formation inhibitor MinC, C-terminal domain NC3_24500 PF04093 rod shape-determining protein MreD NC3_24510 PF04085 rod shape-determining protein MreC NC3_24530 PF04002 RadC-like JAB domain NC3_24540 PF02545 Maf-like protein NC3_24560 PF08245 Mur ligase middle domain NC3_24560 PF02875 Mur ligase family, glutamate ligase domain NC3_24570 PF00133 tRNA synthetases class I (I, L, M and V) NC3_24570 PF08264 Anticodon-binding domain of tRNA NC3_24570 PF10458 Valyl tRNA synthetase tRNA binding arm NC3_24600 PF01476 LysM domain NC3_24610 PF00202 Aminotransferase class-III NC3_24620 PF00490 Delta-aminolevulinic acid dehydratase NC3_24630 PF02602 Uroporphyrinogen-III synthase HemD NC3_24640 PF03900 Porphobilinogen deaminase, C-terminal domain NC3_24640 PF01379 Porphobilinogen deaminase, dipyromethane cofactor binding domain NC3_24650 PF01578 Cytochrome C assembly protein NC3_24660 PF05201 Glutamyl-tRNAGlu reductase, N-terminal domain NC3_24660 PF00745 Glutamyl-tRNAGlu reductase, dimerisation domain NC3_24660 PF01488 Shikimate / quinate 5-dehydrogenase NC3_24680 PF01926 50S ribosome-binding GTPase NC3_24690 PF00004 ATPase family associated with various cellular activities (AAA) NC3_24690 PF05362 Lon protease (S16) C-terminal proteolytic domain NC3_24690 PF02190 ATP-dependent protease La (LON) substrate-binding domain NC3_24700 PF05362 Lon protease (S16) C-terminal proteolytic domain NC3_24700 PF00004 ATPase family associated with various cellular activities (AAA) NC3_24710 PF06689 ClpX C4-type zinc finger NC3_24710 PF10431 C-terminal, D2-small domain, of ClpB protein NC3_24710 PF07724 AAA domain (Cdc48 subfamily) NC3_24720 PF05697 Bacterial trigger factor protein (TF) NC3_24720 PF05698 Bacterial trigger factor protein (TF) C-terminus NC3_24720 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase NC3_24740 PF00694 Aconitase C-terminal domain NC3_24750 PF00330 Aconitase family (aconitate hydratase) NC3_24760 PF00180 Isocitrate/isopropylmalate dehydrogenase NC3_24770 PF00682 HMGL-like NC3_24770 PF08502 LeuA allosteric (dimerisation) domain NC3_24780 PF01450 Acetohydroxy acid isomeroreductase, catalytic domain NC3_24780 PF07991 Acetohydroxy acid isomeroreductase, NADPH-binding domain NC3_24790 PF01842 ACT domain NC3_24790 PF10369 Small subunit of acetolactate synthase NC3_24800 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain NC3_24800 PF00205 Thiamine pyrophosphate enzyme, central domain NC3_24800 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain NC3_24810 PF01063 Amino-transferase class IV NC3_24820 PF10282 Lactonase, 7-bladed beta-propeller NC3_24830 PF06803 Protein of unknown function (DUF1232) NC3_24840 PF04914 DltD protein NC3_24850 PF00550 Phosphopantetheine attachment site NC3_24860 PF03062 MBOAT, membrane-bound O-acyltransferase family NC3_24870 PF13193 AMP-binding enzyme C-terminal domain NC3_24870 PF00501 AMP-binding enzyme NC3_24880 PF12459 D-Ala-teichoic acid biosynthesis protein NC3_24980 PF00589 Phage integrase family NC3_24990 PF12850 Calcineurin-like phosphoesterase superfamily domain NC3_25000 PF01725 Ham1 family NC3_25010 PF03725 3' exoribonuclease family, domain 2 NC3_25010 PF01138 3' exoribonuclease family, domain 1 NC3_25020 PF10646 Sporulation and spore germination NC3_25030 PF01177 Asp/Glu/Hydantoin racemase NC3_25040 PF01047 MarR family NC3_25050 PF00196 Bacterial regulatory proteins, luxR family NC3_25060 PF03600 Citrate transporter NC3_25070 PF03466 LysR substrate binding domain NC3_25070 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family NC3_25080 PF04303 PrpF protein NC3_25090 PF02237 Biotin protein ligase C terminal domain NC3_25090 PF03099 Biotin/lipoate A/B protein ligase family NC3_25100 PF03061 Thioesterase superfamily NC3_25110 PF13183 4Fe-4S dicluster domain NC3_25110 PF13085 2Fe-2S iron-sulfur cluster binding domain NC3_25120 PF00890 FAD binding domain NC3_25120 PF02910 Fumarate reductase flavoprotein C-term NC3_25130 PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit NC3_25140 PF10702 Protein of unknown function (DUF2507) NC3_25150 PF00696 Amino acid kinase family NC3_25150 PF01842 ACT domain NC3_25150 PF13840 ACT domain NC3_25160 PF01541 GIY-YIG catalytic domain NC3_25160 PF02151 UvrB/uvrC motif NC3_25160 PF08459 UvrC Helix-hairpin-helix N-terminal NC3_25170 PF00085 Thioredoxin NC3_25180 PF06964 Alpha-L-arabinofuranosidase C-terminal domain NC3_25190 PF00766 Electron transfer flavoprotein FAD-binding domain NC3_25190 PF01012 Electron transfer flavoprotein domain NC3_25200 PF01012 Electron transfer flavoprotein domain NC3_25210 PF00378 Enoyl-CoA hydratase/isomerase NC3_25220 PF00440 Bacterial regulatory proteins, tetR family NC3_25220 PF08359 YsiA-like protein, C-terminal region NC3_25230 PF00501 AMP-binding enzyme NC3_25230 PF13193 AMP-binding enzyme C-terminal domain NC3_25250 PF03994 Domain of Unknown Function (DUF350) NC3_25260 PF00488 MutS domain V NC3_25260 PF01713 Smr domain NC3_25270 PF14791 DNA polymerase beta thumb NC3_25270 PF14716 Helix-hairpin-helix domain NC3_25270 PF02811 PHP domain NC3_25280 PF02674 Colicin V production protein NC3_25290 PF05164 Cell division protein ZapA NC3_25300 PF01351 Ribonuclease HII NC3_25300 PF11858 Domain of unknown function (DUF3378) NC3_25310 PF03147 Ferredoxin-fold anticodon binding domain NC3_25310 PF03483 B3/4 domain NC3_25310 PF03484 tRNA synthetase B5 domain NC3_25310 PF01588 Putative tRNA binding domain NC3_25310 PF17759 Phenylalanyl tRNA synthetase beta chain CLM domain NC3_25320 PF01409 tRNA synthetases class II core domain (F) NC3_25320 PF02912 Aminoacyl tRNA synthetase class II, N-terminal domain NC3_25330 PF00588 SpoU rRNA Methylase family NC3_25330 PF08032 RNA 2'-O ribose methyltransferase substrate binding NC3_25340 PF14098 Small, acid-soluble spore protein I NC3_25350 PF02554 Carbon starvation protein CstA NC3_25350 PF13722 5TM C-terminal transporter carbon starvation CstA NC3_25360 PF05343 M42 glutamyl aminopeptidase NC3_25380 PF06961 Protein of unknown function (DUF1294) NC3_25390 PF00453 Ribosomal protein L20 NC3_25400 PF01632 Ribosomal protein L35 NC3_25410 PF00707 Translation initiation factor IF-3, C-terminal domain NC3_25410 PF05198 Translation initiation factor IF-3, N-terminal domain NC3_25430 PF13419 Haloacid dehalogenase-like hydrolase NC3_25440 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain NC3_25440 PF08447 PAS fold NC3_25440 PF13426 PAS domain NC3_25450 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain NC3_25450 PF02824 TGS domain NC3_25450 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) NC3_25450 PF03129 Anticodon binding domain NC3_25460 PF08812 YtxC-like family NC3_25470 PF09335 SNARE associated Golgi protein NC3_25480 PF07319 Primosomal protein DnaI N-terminus NC3_25480 PF01695 IstB-like ATP binding protein NC3_25490 PF07261 Replication initiation and membrane attachment NC3_25500 PF03477 ATP cone domain NC3_25520 PF02675 S-adenosylmethionine decarboxylase NC3_25530 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain NC3_25530 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain NC3_25540 PF01121 Dephospho-CoA kinase NC3_25550 PF02659 Putative manganese efflux pump NC3_25560 PF01149 Formamidopyrimidine-DNA glycosylase N-terminal domain NC3_25560 PF06831 Formamidopyrimidine-DNA glycosylase H2TH domain NC3_25560 PF06827 Zinc finger found in FPG and IleRS NC3_25570 PF01367 5'-3' exonuclease, C-terminal SAM fold NC3_25570 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain NC3_25570 PF00476 DNA polymerase family A NC3_25580 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase NC3_25580 PF00512 His Kinase A (phospho-acceptor) domain NC3_25580 PF00989 PAS fold NC3_25580 PF16736 Single Cache-like NC3_25590 PF00072 Response regulator receiver domain NC3_25590 PF00486 Transcriptional regulatory protein, C terminal NC3_25600 PF00056 lactate/malate dehydrogenase, NAD binding domain NC3_25600 PF02866 lactate/malate dehydrogenase, alpha/beta C-terminal domain NC3_25610 PF00180 Isocitrate/isopropylmalate dehydrogenase NC3_25620 PF00285 Citrate synthase, C-terminal domain NC3_25630 PF04284 Protein of unknown function (DUF441) NC3_25640 PF01594 AI-2E family transporter NC3_25650 PF04186 FxsA cytoplasmic membrane protein NC3_25660 PF00391 PEP-utilising enzyme, mobile domain NC3_25660 PF00224 Pyruvate kinase, barrel domain NC3_25660 PF02887 Pyruvate kinase, alpha/beta domain NC3_25670 PF00365 Phosphofructokinase NC3_25680 PF03255 Acetyl co-enzyme A carboxylase carboxyltransferase alpha subunit NC3_25690 PF01039 Carboxyl transferase domain NC3_25690 PF17848 Acetyl-coA carboxylase zinc finger domain NC3_25700 PF03949 Malic enzyme, NAD binding domain NC3_25700 PF00390 Malic enzyme, N-terminal domain NC3_25710 PF07733 Bacterial DNA polymerase III alpha NTPase domain NC3_25710 PF17657 Bacterial DNA polymerase III alpha subunit finger domain NC3_25710 PF14579 Helix-hairpin-helix motif NC3_25710 PF02811 PHP domain NC3_25710 PF01336 OB-fold nucleic acid binding domain NC3_25720 PF14034 Sporulation protein YtrH NC3_25750 PF01368 DHH family NC3_25750 PF02272 DHHA1 domain NC3_25760 PF14007 YtpI-like protein NC3_25770 PF00392 Bacterial regulatory proteins, gntR family NC3_25770 PF07085 DRTGG domain NC3_25770 PF03061 Thioesterase superfamily NC3_25770 PF00571 CBS domain NC3_25810 PF14698 Argininosuccinate lyase C-terminal NC3_25810 PF00206 Lyase NC3_25820 PF00764 Arginosuccinate synthase NC3_25830 PF00994 Probable molybdopterin binding domain NC3_25840 PF00871 Acetokinase family NC3_25850 PF02384 N-6 DNA Methylase NC3_25860 PF08534 Redoxin NC3_25870 PF09579 Sporulation protein YtfJ (Spore_YtfJ) NC3_25880 PF11167 Protein of unknown function (DUF2953) NC3_25890 PF06271 RDD family NC3_25900 PF01343 Peptidase family S49 NC3_25910 PF01513 ATP-NAD kinase NC3_25920 PF03880 DbpA RNA binding domain NC3_25920 PF00270 DEAD/DEAH box helicase NC3_25920 PF00271 Helicase conserved C-terminal domain NC3_25930 PF00487 Fatty acid desaturase NC3_25940 PF07730 Histidine kinase NC3_25950 PF00196 Bacterial regulatory proteins, luxR family NC3_25950 PF00072 Response regulator receiver domain NC3_25960 PF01497 Periplasmic binding protein NC3_25970 PF00072 Response regulator receiver domain NC3_25970 PF00486 Transcriptional regulatory protein, C terminal NC3_25980 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase NC3_25990 PF01098 Cell cycle protein NC3_26000 PF03551 Transcriptional regulator PadR-like family NC3_26010 PF00005 ABC transporter NC3_26020 PF02687 FtsX-like permease family NC3_26030 PF01979 Amidohydrolase family NC3_26040 PF02525 Flavodoxin-like fold NC3_26070 PF01810 LysE type translocator NC3_26080 PF00501 AMP-binding enzyme NC3_26080 PF13193 AMP-binding enzyme C-terminal domain NC3_26090 PF00269 Small, acid-soluble spore proteins, alpha/beta type NC3_26100 PF02568 Thiamine biosynthesis protein (ThiI) NC3_26100 PF02926 THUMP domain NC3_26110 PF00266 Aminotransferase class-V NC3_26120 PF05525 Branched-chain amino acid transport protein NC3_26130 PF05525 Branched-chain amino acid transport protein NC3_26140 PF06160 Septation ring formation regulator, EzrA NC3_26150 PF02811 PHP domain NC3_26160 PF00440 Bacterial regulatory proteins, tetR family NC3_26170 PF13185 GAF domain NC3_26180 PF00163 Ribosomal protein S4/S9 N-terminal domain NC3_26180 PF01479 S4 domain NC3_26190 PF00857 Isochorismatase family NC3_26210 PF01674 Lipase (class 2) NC3_26220 PF03992 Antibiotic biosynthesis monooxygenase NC3_26230 PF01479 S4 domain NC3_26230 PF00579 tRNA synthetases class I (W and Y) NC3_26240 PF00501 AMP-binding enzyme NC3_26240 PF13193 AMP-binding enzyme C-terminal domain NC3_26250 PF00583 Acetyltransferase (GNAT) family NC3_26260 PF00571 CBS domain NC3_26270 PF00850 Histone deacetylase domain NC3_26280 PF00356 Bacterial regulatory proteins, lacI family NC3_26290 PF00793 DAHP synthetase I family NC3_26290 PF01817 Chorismate mutase type II NC3_26300 PF11009 Protein of unknown function (DUF2847) NC3_26310 PF12732 YtxH-like protein NC3_26320 PF06103 Bacterial protein of unknown function (DUF948) NC3_26330 PF01225 Mur ligase family, catalytic domain NC3_26330 PF02875 Mur ligase family, glutamate ligase domain NC3_26330 PF08245 Mur ligase middle domain NC3_26340 PF17854 FtsK alpha domain NC3_26340 PF09397 Ftsk gamma domain NC3_26340 PF01580 FtsK/SpoIIIE family NC3_26350 PF14794 Domain of unknown function (DUF4479) NC3_26350 PF01588 Putative tRNA binding domain NC3_26360 PF07285 Protein of unknown function (DUF1444) NC3_26370 PF00085 Thioredoxin NC3_26390 PF11071 Nucleoside 2-deoxyribosyltransferase YtoQ NC3_26400 PF05343 M42 glutamyl aminopeptidase NC3_26410 PF03413 Peptidase propeptide and YPEB domain NC3_26420 PF00390 Malic enzyme, N-terminal domain NC3_26420 PF03949 Malic enzyme, NAD binding domain NC3_26430 PF00753 Metallo-beta-lactamase superfamily NC3_26440 PF02390 Putative methyltransferase NC3_26450 PF14165 YtzH-like protein NC3_26460 PF01636 Phosphotransferase enzyme family NC3_26470 PF00781 Diacylglycerol kinase catalytic domain NC3_26500 PF00291 Pyridoxal-phosphate dependent enzyme NC3_26510 PF03575 Peptidase family S51 NC3_26520 PF01546 Peptidase family M20/M25/M40 NC3_26530 PF00860 Permease family NC3_26540 PF08220 DeoR-like helix-turn-helix domain NC3_26550 PF01479 S4 domain NC3_26550 PF00849 RNA pseudouridylate synthase NC3_26560 PF14667 Polysaccharide biosynthesis C-terminal domain NC3_26560 PF01943 Polysaccharide biosynthesis protein NC3_26590 PF02028 BCCT, betaine/carnitine/choline family transporter NC3_26600 PF03691 Uncharacterised protein family (UPF0167) NC3_26610 PF10957 Sporulation protein Cse60 NC3_26620 PF00581 Rhodanese-like domain NC3_26630 PF04854 Protein of unknown function, DUF624 NC3_26640 PF01408 Oxidoreductase family, NAD-binding Rossmann fold NC3_26640 PF02894 Oxidoreductase family, C-terminal alpha/beta domain NC3_26660 PF07470 Glycosyl Hydrolase Family 88 NC3_26670 PF00528 Binding-protein-dependent transport system inner membrane component NC3_26680 PF17853 GGDEF-like domain NC3_26680 PF12833 Helix-turn-helix domain NC3_26690 PF01638 HxlR-like helix-turn-helix NC3_26700 PF07690 Major Facilitator Superfamily NC3_26710 PF00248 Aldo/keto reductase family NC3_26720 PF13416 Bacterial extracellular solute-binding protein NC3_26730 PF00528 Binding-protein-dependent transport system inner membrane component NC3_26740 PF01370 NAD dependent epimerase/dehydratase family NC3_26750 PF01738 Dienelactone hydrolase family NC3_26760 PF08264 Anticodon-binding domain of tRNA NC3_26760 PF00133 tRNA synthetases class I (I, L, M and V) NC3_26760 PF13603 Leucyl-tRNA synthetase, Domain 2 NC3_26760 PF09334 tRNA synthetases class I (M) NC3_26770 PF14074 Protein of unknown function (DUF4257) NC3_26780 PF13426 PAS domain NC3_26780 PF01740 STAS domain NC3_26790 PF04791 LMBR1-like membrane protein NC3_26800 PF02687 FtsX-like permease family NC3_26800 PF12704 MacB-like periplasmic core domain NC3_26810 PF00005 ABC transporter NC3_26830 PF00005 ABC transporter NC3_26840 PF00392 Bacterial regulatory proteins, gntR family NC3_26870 PF10732 Protein of unknown function (DUF2524) NC3_26880 PF04055 Radical SAM superfamily NC3_26880 PF16199 Radical_SAM C-terminal domain NC3_26890 PF06962 Putative rRNA methylase NC3_26900 PF07070 SpoOM protein NC3_26910 PF10776 Protein of unknown function (DUF2600) NC3_26920 PF12146 Serine aminopeptidase, S33 NC3_26930 PF00132 Bacterial transferase hexapeptide (six repeats) NC3_26940 PF00733 Asparagine synthase NC3_26940 PF13537 Glutamine amidotransferase domain NC3_26950 PF00438 S-adenosylmethionine synthetase, N-terminal domain NC3_26950 PF02773 S-adenosylmethionine synthetase, C-terminal domain NC3_26950 PF02772 S-adenosylmethionine synthetase, central domain NC3_26960 PF01293 Phosphoenolpyruvate carboxykinase NC3_26970 PF10763 Protein of unknown function (DUF2584) NC3_26980 PF00326 Prolyl oligopeptidase family NC3_26990 PF01593 Flavin containing amine oxidoreductase NC3_27000 PF00535 Glycosyl transferase family 2 NC3_27040 PF00005 ABC transporter NC3_27050 PF00528 Binding-protein-dependent transport system inner membrane component NC3_27060 PF00293 NUDIX domain NC3_27070 PF02342 TerD domain NC3_27100 PF05105 Bacteriophage holin family NC3_27120 PF00210 Ferritin-like domain NC3_27140 PF13115 YtkA-like NC3_27150 PF02664 S-Ribosylhomocysteinase (LuxS) NC3_27160 PF01809 Putative membrane protein insertion efficiency factor NC3_27170 PF00484 Carbonic anhydrase NC3_27180 PF01297 Zinc-uptake complex component A periplasmic NC3_27180 PF09223 ZinT (YodA) periplasmic lipocalin-like zinc-recruitment NC3_27190 PF01197 Ribosomal protein L31 NC3_27200 PF01654 Cytochrome bd terminal oxidase subunit I NC3_27210 PF02322 Cytochrome bd terminal oxidase subunit II NC3_27220 PF07561 Domain of Unknown Function (DUF1540) NC3_27240 PF13378 Enolase C-terminal domain-like NC3_27240 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain NC3_27250 PF00501 AMP-binding enzyme NC3_27250 PF13193 AMP-binding enzyme C-terminal domain NC3_27260 PF00378 Enoyl-CoA hydratase/isomerase NC3_27270 PF00561 alpha/beta hydrolase fold NC3_27280 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain NC3_27280 PF16582 Middle domain of thiamine pyrophosphate NC3_27280 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain NC3_27290 PF00425 chorismate binding enzyme NC3_27300 PF01040 UbiA prenyltransferase family NC3_27310 PF01258 Prokaryotic dksA/traR C4-type zinc finger NC3_27320 PF03073 TspO/MBR family NC3_27330 PF09515 Thiamine transporter protein (Thia_YuaJ) NC3_27350 PF00583 Acetyltransferase (GNAT) family NC3_27360 PF06803 Protein of unknown function (DUF1232) NC3_27370 PF01098 Cell cycle protein NC3_27380 PF01098 Cell cycle protein NC3_27390 PF01145 SPFH domain / Band 7 family NC3_27390 PF15975 Flotillin NC3_27410 PF12867 DinB superfamily NC3_27420 PF00465 Iron-containing alcohol dehydrogenase NC3_27430 PF00171 Aldehyde dehydrogenase family NC3_27460 PF01471 Putative peptidoglycan binding domain NC3_27460 PF01510 N-acetylmuramoyl-L-alanine amidase NC3_27470 PF04688 SPP1 phage holin NC3_27480 PF10960 BhlA holin family NC3_27530 PF10076 Uncharacterised protein conserved in bacteria (DUF2313) NC3_27540 PF04865 Baseplate J-like protein NC3_27550 PF10934 Protein of unknown function (DUF2634) NC3_27560 PF10844 Protein of unknown function (DUF2577) NC3_27580 PF01476 LysM domain NC3_27590 PF01464 Transglycosylase SLT domain NC3_27610 PF08890 Phage XkdN-like tail assembly chaperone protein, TAC NC3_27620 PF09393 Phage tail tube protein NC3_27630 PF17481 Phage tail sheath protein beta-sandwich domain NC3_27630 PF04984 Phage tail sheath protein subtilisin-like domain NC3_27630 PF17482 Phage tail sheath C-terminal domain NC3_27660 PF04883 Bacteriophage HK97-gp10, putative tail-component NC3_27670 PF12206 Domain of unknown function (DUF3599) NC3_27680 PF11436 Protein of unknown function (DUF3199) NC3_27690 PF05065 Phage capsid family NC3_27700 PF14550 Putative phage serine protease XkdF NC3_27710 PF04860 Phage portal protein NC3_27720 PF04466 Phage terminase large subunit NC3_27720 PF17288 Terminase RNAseH like domain NC3_27730 PF10668 Phage terminase small subunit NC3_27740 PF08281 Sigma-70, region 4 NC3_27750 PF17356 Phage-like element PBSX protein XtrA NC3_27760 PF05866 Endodeoxyribonuclease RusA NC3_27800 PF01381 Helix-turn-helix NC3_27830 PF06968 Biotin and Thiamin Synthesis associated domain NC3_27830 PF04055 Radical SAM superfamily NC3_27850 PF02673 Bacitracin resistance protein BacA NC3_27860 PF01594 AI-2E family transporter NC3_27880 PF02894 Oxidoreductase family, C-terminal alpha/beta domain NC3_27880 PF01408 Oxidoreductase family, NAD-binding Rossmann fold NC3_27890 PF01965 DJ-1/PfpI family NC3_27900 PF02743 Cache domain NC3_27900 PF00672 HAMP domain NC3_27900 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain NC3_27910 PF02743 Cache domain NC3_27910 PF00672 HAMP domain NC3_27910 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain NC3_27920 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain NC3_27920 PF00672 HAMP domain NC3_27920 PF02743 Cache domain NC3_27930 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain NC3_27930 PF00672 HAMP domain NC3_27930 PF02743 Cache domain NC3_27960 PF03060 Nitronate monooxygenase NC3_27970 PF01894 Uncharacterised protein family UPF0047 NC3_27980 PF00571 CBS domain NC3_27980 PF03471 Transporter associated domain NC3_27980 PF01595 Cyclin M transmembrane N-terminal domain NC3_27990 PF04298 Putative neutral zinc metallopeptidase NC3_28010 PF07885 Ion channel NC3_28010 PF02254 TrkA-N domain NC3_28020 PF08868 YugN-like family NC3_28040 PF00342 Phosphoglucose isomerase NC3_28050 PF00465 Iron-containing alcohol dehydrogenase NC3_28060 PF00465 Iron-containing alcohol dehydrogenase NC3_28070 PF04070 Domain of unknown function (DUF378) NC3_28080 PF00575 S1 RNA binding domain NC3_28090 PF00155 Aminotransferase class I and II NC3_28100 PF01037 Lrp/AsnC ligand binding domain NC3_28110 PF08386 TAP-like protein NC3_28110 PF00561 alpha/beta hydrolase fold NC3_28120 PF08958 Domain of unknown function (DUF1871) NC3_28130 PF00155 Aminotransferase class I and II NC3_28140 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase NC3_28140 PF00512 His Kinase A (phospho-acceptor) domain NC3_28160 PF08810 Kinase associated protein B NC3_28170 PF00929 Exonuclease NC3_28180 PF07690 Major Facilitator Superfamily NC3_28190 PF00905 Penicillin binding protein transpeptidase domain NC3_28190 PF00912 Transglycosylase NC3_28200 PF04134 Protein of unknown function, DUF393 NC3_28210 PF17328 Family of unknown function (DUF5366) NC3_28220 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase NC3_28220 PF00989 PAS fold NC3_28220 PF17203 Single cache domain 3 NC3_28220 PF14689 Sensor_kinase_SpoOB-type, alpha-helical domain NC3_28230 PF00072 Response regulator receiver domain NC3_28240 PF02608 ABC transporter substrate-binding protein PnrA-like NC3_28250 PF00005 ABC transporter NC3_28260 PF02653 Branched-chain amino acid transport system / permease component NC3_28270 PF02653 Branched-chain amino acid transport system / permease component NC3_28280 PF03390 2-hydroxycarboxylate transporter family NC3_28300 PF00361 Proton-conducting membrane transporter NC3_28300 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus NC3_28300 PF13244 Domain of unknown function (DUF4040) NC3_28310 PF04039 Domain related to MnhB subunit of Na+/H+ antiporter NC3_28320 PF00420 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L NC3_28330 PF00361 Proton-conducting membrane transporter NC3_28340 PF01899 Na+/H+ ion antiporter subunit NC3_28350 PF04066 Multiple resistance and pH regulation protein F (MrpF / PhaF) NC3_28360 PF03334 Na+/H+ antiporter subunit NC3_28370 PF03061 Thioesterase superfamily NC3_28380 PF00072 Response regulator receiver domain NC3_28380 PF00196 Bacterial regulatory proteins, luxR family NC3_28390 PF07730 Histidine kinase NC3_28390 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase NC3_28410 PF00348 Polyprenyl synthetase NC3_28420 PF08181 DegQ (SacQ) family NC3_28440 PF00563 EAL domain NC3_28440 PF08668 HDOD domain NC3_28450 PF17956 Nicotinate phosphoribosyltransferase C-terminal domain NC3_28450 PF04095 Nicotinate phosphoribosyltransferase (NAPRTase) family NC3_28450 PF17767 Nicotinate phosphoribosyltransferase (NAPRTase) N-terminal domain NC3_28460 PF00857 Isochorismatase family NC3_28470 PF07997 Protein of unknown function (DUF1694) NC3_28480 PF14166 YueH-like protein NC3_28490 PF10676 Spore germination protein gerPA/gerPF NC3_28500 PF10676 Spore germination protein gerPA/gerPF NC3_28510 PF01594 AI-2E family transporter NC3_28520 PF10842 Protein of unknown function (DUF2642) NC3_28540 PF01966 HD domain NC3_28550 PF00106 short chain dehydrogenase NC3_28560 PF17355 Family of unknown function (DUF5383) NC3_28580 PF01580 FtsK/SpoIIIE family NC3_28580 PF12538 DNA transporter NC3_28590 PF10140 WXG100 protein secretion system (Wss), protein YukC NC3_28600 PF08817 WXG100 protein secretion system (Wss), protein YukD NC3_28610 PF06013 Proteins of 100 residues with WXG NC3_28620 PF06018 CodY GAF-like domain NC3_28620 PF13556 PucR C-terminal helix-turn-helix domain NC3_28620 PF17853 GGDEF-like domain NC3_28630 PF01262 Alanine dehydrogenase/PNT, C-terminal domain NC3_28630 PF05222 Alanine dehydrogenase/PNT, N-terminal domain NC3_28640 PF02632 BioY family NC3_28650 PF13726 Na+-H+ antiporter family NC3_28650 PF03553 Na+/H+ antiporter family NC3_28660 PF00883 Cytosol aminopeptidase family, catalytic domain NC3_28660 PF02789 Cytosol aminopeptidase family, N-terminal domain NC3_28670 PF02681 Divergent PAP2 family NC3_28680 PF06725 3D domain NC3_28690 PF14068 Putative membrane protein NC3_28700 PF17302 Family of unknown function (DUF5351) NC3_28710 PF07992 Pyridine nucleotide-disulphide oxidoreductase NC3_28720 PF07992 Pyridine nucleotide-disulphide oxidoreductase NC3_28750 PF01521 Iron-sulphur cluster biosynthesis NC3_28760 PF01678 Diaminopimelate epimerase NC3_28770 PF07293 Protein of unknown function (DUF1450) NC3_28780 PF07992 Pyridine nucleotide-disulphide oxidoreductase NC3_28800 PF07315 Protein of unknown function (DUF1462) NC3_28810 PF01106 NifU-like domain NC3_28820 PF07676 WD40-like Beta Propeller Repeat NC3_28820 PF00326 Prolyl oligopeptidase family NC3_28830 PF08544 GHMP kinases C terminal NC3_28830 PF00288 GHMP kinases N terminal domain NC3_28840 PF00291 Pyridoxal-phosphate dependent enzyme NC3_28850 PF01842 ACT domain NC3_28850 PF00742 Homoserine dehydrogenase NC3_28850 PF03447 Homoserine dehydrogenase, NAD binding domain NC3_28860 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain NC3_28860 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain NC3_28880 PF04608 Phosphatidylglycerophosphatase A NC3_28890 PF13344 Haloacid dehalogenase-like hydrolase NC3_28900 PF01934 Protein of unknown function DUF86 NC3_28910 PF06265 Protein of unknown function (DUF1027) NC3_28920 PF09580 Sporulation lipoprotein YhcN/YlaJ (Spore_YhcN_YlaJ) NC3_28930 PF16881 N-terminal domain of lipoyl synthase of Radical_SAM family NC3_28930 PF04055 Radical SAM superfamily NC3_28940 PF01551 Peptidase family M23 NC3_28960 PF10903 Protein of unknown function (DUF2691) NC3_28970 PF09560 Sporulation protein YunB (Spo_YunB) NC3_28980 PF08827 Domain of unknown function (DUF1805) NC3_28990 PF02872 5'-nucleotidase, C-terminal domain NC3_29000 PF01904 Protein of unknown function DUF72 NC3_29010 PF13556 PucR C-terminal helix-turn-helix domain NC3_29010 PF07905 Purine catabolism regulatory protein-like family NC3_29010 PF17853 GGDEF-like domain NC3_29020 PF00190 Cupin NC3_29030 PF07690 Major Facilitator Superfamily NC3_29040 PF00266 Aminotransferase class-V NC3_29050 PF04231 Endonuclease I NC3_29070 PF01032 FecCD transport family NC3_29080 PF01032 FecCD transport family NC3_29090 PF01497 Periplasmic binding protein NC3_29110 PF07859 alpha/beta hydrolase fold NC3_29130 PF06146 Phosphate-starvation-inducible E NC3_29140 PF00512 His Kinase A (phospho-acceptor) domain NC3_29150 PF00072 Response regulator receiver domain NC3_29150 PF00486 Transcriptional regulatory protein, C terminal NC3_29160 PF04235 Protein of unknown function (DUF418) NC3_29180 PF02525 Flavodoxin-like fold NC3_29200 PF18665 Tetracyclin repressor-like, C-terminal domain NC3_29200 PF00440 Bacterial regulatory proteins, tetR family NC3_29240 PF01458 Uncharacterized protein family (UPF0051) NC3_29250 PF01592 NifU-like N terminal domain NC3_29260 PF00266 Aminotransferase class-V NC3_29270 PF01458 Uncharacterized protein family (UPF0051) NC3_29280 PF00005 ABC transporter NC3_29300 PF02627 Carboxymuconolactone decarboxylase family NC3_29310 PF03180 NLPA lipoprotein NC3_29320 PF00528 Binding-protein-dependent transport system inner membrane component NC3_29330 PF00005 ABC transporter NC3_29330 PF09383 NIL domain NC3_29340 PF02036 SCP-2 sterol transfer family NC3_29350 PF00085 Thioredoxin NC3_29360 PF01751 Toprim domain NC3_29370 PF10830 Protein of unknown function (DUF2553) NC3_29380 PF01597 Glycine cleavage H-protein NC3_29390 PF03960 ArsC family NC3_29400 PF02771 Acyl-CoA dehydrogenase, N-terminal domain NC3_29400 PF00441 Acyl-CoA dehydrogenase, C-terminal domain NC3_29400 PF02770 Acyl-CoA dehydrogenase, middle domain NC3_29410 PF02803 Thiolase, C-terminal domain NC3_29410 PF00108 Thiolase, N-terminal domain NC3_29420 PF00378 Enoyl-CoA hydratase/isomerase NC3_29420 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain NC3_29420 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain NC3_29430 PF14115 YuzL-like protein NC3_29450 PF07875 Coat F domain NC3_29460 PF10835 Protein of unknown function (DUF2573) NC3_29470 PF00005 ABC transporter NC3_29490 PF00106 short chain dehydrogenase NC3_29500 PF13180 PDZ domain NC3_29510 PF00486 Transcriptional regulatory protein, C terminal NC3_29510 PF00072 Response regulator receiver domain NC3_29520 PF00512 His Kinase A (phospho-acceptor) domain NC3_29520 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase NC3_29520 PF00672 HAMP domain NC3_29540 PF00440 Bacterial regulatory proteins, tetR family NC3_29550 PF10415 Fumarase C C-terminus NC3_29550 PF00206 Lyase NC3_29560 PF13113 Protein of unknown function (DUF3970) NC3_29570 PF03323 Bacillus/Clostridium GerA spore germination protein NC3_29580 PF03845 Spore germination protein NC3_29590 PF05504 Spore germination B3/ GerAC like, C-terminal NC3_29610 PF00196 Bacterial regulatory proteins, luxR family NC3_29610 PF00072 Response regulator receiver domain NC3_29620 PF00672 HAMP domain NC3_29620 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase NC3_29620 PF07730 Histidine kinase NC3_29630 PF09922 Cell wall-active antibiotics response 4TMS YvqF NC3_29650 PF04012 PspA/IM30 family NC3_29670 PF01923 Cobalamin adenosyltransferase NC3_29690 PF04166 Pyridoxal phosphate biosynthetic protein PdxA NC3_29700 PF07005 Sugar-binding N-terminal domain NC3_29700 PF17042 Nucleotide-binding C-terminal domain NC3_29710 PF01590 GAF domain NC3_29710 PF00158 Sigma-54 interaction domain NC3_29740 PF00465 Iron-containing alcohol dehydrogenase NC3_29750 PF00701 Dihydrodipicolinate synthetase family NC3_29760 PF00005 ABC transporter NC3_29770 PF01032 FecCD transport family NC3_29780 PF01497 Periplasmic binding protein NC3_29790 PF00295 Glycosyl hydrolases family 28 NC3_29800 PF08666 SAF domain NC3_29800 PF04295 D-galactarate dehydratase / Altronate hydrolase, C terminus NC3_29810 PF08125 Mannitol dehydrogenase C-terminal domain NC3_29810 PF01232 Mannitol dehydrogenase Rossmann domain NC3_29820 PF00356 Bacterial regulatory proteins, lacI family NC3_29830 PF02614 Glucuronate isomerase NC3_29840 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase NC3_29840 PF00512 His Kinase A (phospho-acceptor) domain NC3_29850 PF00486 Transcriptional regulatory protein, C terminal NC3_29850 PF00072 Response regulator receiver domain NC3_29860 PF00005 ABC transporter NC3_29870 PF01032 FecCD transport family NC3_29880 PF01032 FecCD transport family NC3_29890 PF01497 Periplasmic binding protein NC3_29900 PF13520 Amino acid permease NC3_29930 PF04307 LexA-binding, inner membrane-associated putative hydrolase NC3_29940 PF00884 Sulfatase NC3_29960 PF00528 Binding-protein-dependent transport system inner membrane component NC3_29970 PF00248 Aldo/keto reductase family NC3_29980 PF00480 ROK family NC3_29990 PF00999 Sodium/hydrogen exchanger family NC3_30000 PF03458 UPF0126 domain NC3_30010 PF02600 Disulfide bond formation protein DsbB NC3_30020 PF13462 Thioredoxin NC3_30030 PF00403 Heavy-metal-associated domain NC3_30040 PF00005 ABC transporter NC3_30050 PF00950 ABC 3 transport family NC3_30060 PF01297 Zinc-uptake complex component A periplasmic NC3_30080 PF13977 BetI-type transcriptional repressor, C-terminal NC3_30080 PF00440 Bacterial regulatory proteins, tetR family NC3_30090 PF00072 Response regulator receiver domain NC3_30090 PF08664 YcbB domain NC3_30100 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase NC3_30110 PF10415 Fumarase C C-terminus NC3_30110 PF00206 Lyase NC3_30120 PF00375 Sodium:dicarboxylate symporter family NC3_30140 PF00403 Heavy-metal-associated domain NC3_30150 PF00403 Heavy-metal-associated domain NC3_30160 PF02583 Metal-sensitive transcriptional repressor NC3_30180 PF00072 Response regulator receiver domain NC3_30180 PF00990 Diguanylate cyclase, GGDEF domain NC3_30210 PF00535 Glycosyl transferase family 2 NC3_30210 PF04464 CDP-Glycerol:Poly(glycerophosphate) glycerophosphotransferase NC3_30220 PF01668 SmpB protein NC3_30230 PF00773 RNB domain NC3_30230 PF00575 S1 RNA binding domain NC3_30230 PF08206 Ribonuclease B OB domain NC3_30230 PF17876 Cold shock domain NC3_30240 PF12146 Serine aminopeptidase, S33 NC3_30250 PF03840 Preprotein translocase SecG subunit NC3_30260 PF04014 Antidote-toxin recognition MazE, bacterial antitoxin NC3_30260 PF18277 AbrB C-terminal domain NC3_30270 PF01381 Helix-turn-helix NC3_30310 PF01638 HxlR-like helix-turn-helix NC3_30320 PF00528 Binding-protein-dependent transport system inner membrane component NC3_30330 PF04069 Substrate binding domain of ABC-type glycine betaine transport system NC3_30340 PF00528 Binding-protein-dependent transport system inner membrane component NC3_30350 PF00571 CBS domain NC3_30350 PF00005 ABC transporter NC3_30360 PF12802 MarR family NC3_30370 PF01914 MarC family integral membrane protein NC3_30390 PF00583 Acetyltransferase (GNAT) family NC3_30430 PF00005 ABC transporter NC3_30450 PF00113 Enolase, C-terminal TIM barrel domain NC3_30450 PF03952 Enolase, N-terminal domain NC3_30460 PF06415 BPG-independent PGAM N-terminus (iPGM_N) NC3_30460 PF01676 Metalloenzyme superfamily NC3_30470 PF00121 Triosephosphate isomerase NC3_30480 PF00162 Phosphoglycerate kinase NC3_30490 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain NC3_30490 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain NC3_30500 PF04198 Putative sugar-binding domain NC3_30510 PF00324 Amino acid permease NC3_30520 PF00202 Aminotransferase class-III NC3_30530 PF00158 Sigma-54 interaction domain NC3_30530 PF02954 Bacterial regulatory protein, Fis family NC3_30530 PF13426 PAS domain NC3_30540 PF07729 FCD domain NC3_30540 PF00392 Bacterial regulatory proteins, gntR family NC3_30550 PF04963 Sigma-54 factor, core binding domain NC3_30550 PF04552 Sigma-54, DNA binding domain NC3_30550 PF00309 Sigma-54 factor, Activator interacting domain (AID) NC3_30560 PF09628 YvfG protein NC3_30570 PF01554 MatE NC3_30580 PF00005 ABC transporter NC3_30580 PF08352 Oligopeptide/dipeptide transporter, C-terminal region NC3_30590 PF08352 Oligopeptide/dipeptide transporter, C-terminal region NC3_30590 PF00005 ABC transporter NC3_30600 PF00528 Binding-protein-dependent transport system inner membrane component NC3_30610 PF00528 Binding-protein-dependent transport system inner membrane component NC3_30620 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle NC3_30630 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family NC3_30640 PF00132 Bacterial transferase hexapeptide (six repeats) NC3_30640 PF17836 PglD N-terminal domain NC3_30650 PF02397 Bacterial sugar transferase NC3_30660 PF01943 Polysaccharide biosynthesis protein NC3_30660 PF14667 Polysaccharide biosynthesis C-terminal domain NC3_30670 PF04230 Polysaccharide pyruvyl transferase NC3_30680 PF00535 Glycosyl transferase family 2 NC3_30700 PF13439 Glycosyltransferase Family 4 NC3_30700 PF00534 Glycosyl transferases group 1 NC3_30710 PF00535 Glycosyl transferase family 2 NC3_30720 PF00534 Glycosyl transferases group 1 NC3_30720 PF13439 Glycosyltransferase Family 4 NC3_30730 PF02719 Polysaccharide biosynthesis protein NC3_30740 PF13614 AAA domain NC3_30750 PF02706 Chain length determinant protein NC3_30760 PF08671 Anti-repressor SinI NC3_30760 PF01381 Helix-turn-helix NC3_30780 PF01497 Periplasmic binding protein NC3_30790 PF01032 FecCD transport family NC3_30800 PF01032 FecCD transport family NC3_30810 PF11738 Protein of unknown function (DUF3298) NC3_30810 PF13739 Deacetylase PdaC NC3_30810 PF01522 Polysaccharide deacetylase NC3_30820 PF12848 ABC transporter NC3_30820 PF00005 ABC transporter NC3_30830 PF00005 ABC transporter NC3_30840 PF00005 ABC transporter NC3_30850 PF12911 N-terminal TM domain of oligopeptide transport permease C NC3_30850 PF00528 Binding-protein-dependent transport system inner membrane component NC3_30860 PF00528 Binding-protein-dependent transport system inner membrane component NC3_30870 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle NC3_30880 PF00201 UDP-glucoronosyl and UDP-glucosyl transferase NC3_30910 PF00574 Clp protease NC3_30920 PF03641 Possible lysine decarboxylase NC3_30930 PF03819 MazG nucleotide pyrophosphohydrolase domain NC3_30940 PF01740 STAS domain NC3_30940 PF00916 Sulfate permease family NC3_30950 PF00484 Carbonic anhydrase NC3_30960 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain NC3_30960 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain NC3_30970 PF00545 ribonuclease NC3_30980 PF00797 N-acetyltransferase NC3_30990 PF00381 PTS HPr component phosphorylation site NC3_31000 PF10298 WhiA N-terminal LAGLIDADG-like domain NC3_31000 PF02650 WhiA C-terminal HTH domain NC3_31000 PF14527 WhiA LAGLIDADG-like domain NC3_31010 PF01933 Uncharacterised protein family UPF0052 NC3_31020 PF03668 P-loop ATPase protein family NC3_31030 PF00293 NUDIX domain NC3_31040 PF07992 Pyridine nucleotide-disulphide oxidoreductase NC3_31050 PF00877 NlpC/P60 family NC3_31070 PF01503 Phosphoribosyl-ATP pyrophosphohydrolase NC3_31070 PF01502 Phosphoribosyl-AMP cyclohydrolase NC3_31080 PF00977 Histidine biosynthesis protein NC3_31090 PF00977 Histidine biosynthesis protein NC3_31100 PF00117 Glutamine amidotransferase class-I NC3_31110 PF00475 Imidazoleglycerol-phosphate dehydratase NC3_31120 PF00815 Histidinol dehydrogenase NC3_31130 PF01634 ATP phosphoribosyltransferase NC3_31140 PF13393 Histidyl-tRNA synthetase NC3_31150 PF13529 Peptidase_C39 like family NC3_31180 PF13460 NAD(P)H-binding NC3_31190 PF02082 Transcriptional regulator NC3_31200 PF14602 Hexapeptide repeat of succinyl-transferase NC3_31210 PF13419 Haloacid dehalogenase-like hydrolase NC3_31220 PF07670 Nucleoside recognition NC3_31230 PF01790 Prolipoprotein diacylglyceryl transferase NC3_31240 PF07475 HPr Serine kinase C-terminal domain NC3_31240 PF02603 HPr Serine kinase N terminus NC3_31250 PF01979 Amidohydrolase family NC3_31260 PF01182 Glucosamine-6-phosphate isomerases/6-phosphogluconolactonase NC3_31270 PF00392 Bacterial regulatory proteins, gntR family NC3_31270 PF07702 UTRA domain NC3_31280 PF00149 Calcineurin-like phosphoesterase NC3_31290 PF04020 Mycobacterial 4 TMS phage holin, superfamily IV NC3_31300 PF04024 PspC domain NC3_31310 PF13349 Putative adhesin NC3_31340 PF17760 UvrA interaction domain NC3_31340 PF17755 UvrA DNA-binding domain NC3_31340 PF00005 ABC transporter NC3_31350 PF17757 UvrB interaction domain NC3_31350 PF12344 Ultra-violet resistance protein B NC3_31350 PF02151 UvrB/uvrC motif NC3_31350 PF04851 Type III restriction enzyme, res subunit NC3_31350 PF00271 Helicase conserved C-terminal domain NC3_31360 PF09964 Uncharacterized protein conserved in bacteria (DUF2198) NC3_31370 PF01326 Pyruvate phosphate dikinase, PEP/pyruvate binding domain NC3_31370 PF00391 PEP-utilising enzyme, mobile domain NC3_31380 PF00440 Bacterial regulatory proteins, tetR family NC3_31390 PF07690 Major Facilitator Superfamily NC3_31410 PF00072 Response regulator receiver domain NC3_31410 PF00486 Transcriptional regulatory protein, C terminal NC3_31420 PF00512 His Kinase A (phospho-acceptor) domain NC3_31420 PF18698 Histidine kinase sensor domain NC3_31420 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase NC3_31420 PF00672 HAMP domain NC3_31420 PF00989 PAS fold NC3_31430 PF13231 Dolichyl-phosphate-mannose-protein mannosyltransferase NC3_31440 PF00535 Glycosyl transferase family 2 NC3_31450 PF00324 Amino acid permease NC3_31460 PF00881 Nitroreductase family NC3_31470 PF01638 HxlR-like helix-turn-helix NC3_31480 PF17820 PDZ domain NC3_31490 PF17423 Swarming motility protein NC3_31500 PF01471 Putative peptidoglycan binding domain NC3_31500 PF03572 Peptidase family S41 NC3_31500 PF17820 PDZ domain NC3_31510 PF01925 Sulfite exporter TauE/SafE NC3_31520 PF00877 NlpC/P60 family NC3_31530 PF02687 FtsX-like permease family NC3_31530 PF18075 FtsX extracellular domain NC3_31540 PF00005 ABC transporter NC3_31550 PF13442 Cytochrome C oxidase, cbb3-type, subunit III NC3_31560 PF10035 Uncharacterized protein conserved in bacteria (DUF2179) NC3_31560 PF02588 Uncharacterised 5xTM membrane BCR, YitT family COG1284 NC3_31590 PF00472 RF-1 domain NC3_31590 PF03462 PCRF domain NC3_31600 PF02810 SEC-C motif NC3_31600 PF01043 SecA preprotein cross-linking domain NC3_31600 PF07516 SecA Wing and Scaffold domain NC3_31600 PF07517 SecA DEAD-like domain NC3_31610 PF16321 Sigma 54 modulation/S30EA ribosomal protein C terminus NC3_31610 PF02482 Sigma 54 modulation protein / S30EA ribosomal protein NC3_31620 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain NC3_31620 PF00672 HAMP domain NC3_31620 PF02743 Cache domain NC3_31650 PF02561 Flagellar protein FliS NC3_31660 PF07196 Flagellin hook IN motif NC3_31660 PF07195 Flagellar hook-associated protein 2 C-terminus NC3_31660 PF02465 Flagellar hook-associated protein 2 N-terminus NC3_31670 PF03646 FlaG protein NC3_31680 PF02599 Global regulator protein family NC3_31690 PF02623 FliW protein NC3_31710 PF00700 Bacterial flagellin C-terminal helical region NC3_31710 PF00669 Bacterial flagellin N-terminal helical region NC3_31720 PF06429 Flagellar basal body rod FlgEFG protein C-terminal NC3_31720 PF00460 Flagella basal body rod protein NC3_31730 PF05130 FlgN protein NC3_31770 PF10719 Late competence development protein ComFB NC3_31780 PF00271 Helicase conserved C-terminal domain NC3_31780 PF04851 Type III restriction enzyme, res subunit NC3_31790 PF02645 Uncharacterised protein, DegV family COG1307 NC3_31800 PF00196 Bacterial regulatory proteins, luxR family NC3_31800 PF00072 Response regulator receiver domain NC3_31810 PF05384 Sensor protein DegS NC3_31810 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase NC3_31810 PF07730 Histidine kinase NC3_31820 PF09186 Domain of unknown function (DUF1949) NC3_31820 PF01205 Uncharacterized protein family UPF0029 NC3_31830 PF03816 Cell envelope-related transcriptional attenuator domain NC3_31840 PF00953 Glycosyl transferase family 4 NC3_31860 PF00535 Glycosyl transferase family 2 NC3_31870 PF02706 Chain length determinant protein NC3_31880 PF04932 O-Antigen ligase NC3_31890 PF16363 GDP-mannose 4,6 dehydratase NC3_31900 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain NC3_31900 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain NC3_31900 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain NC3_31910 PF00534 Glycosyl transferases group 1 NC3_31910 PF13439 Glycosyltransferase Family 4 NC3_31920 PF14667 Polysaccharide biosynthesis C-terminal domain NC3_31920 PF01943 Polysaccharide biosynthesis protein NC3_31930 PF02397 Bacterial sugar transferase NC3_31950 PF04122 Putative cell wall binding repeat 2 NC3_31950 PF01520 N-acetylmuramoyl-L-alanine amidase NC3_31960 PF01520 N-acetylmuramoyl-L-alanine amidase NC3_31960 PF04122 Putative cell wall binding repeat 2 NC3_31970 PF04122 Putative cell wall binding repeat 2 NC3_31970 PF08486 Stage II sporulation protein NC3_31990 PF03816 Cell envelope-related transcriptional attenuator domain NC3_32000 PF04464 CDP-Glycerol:Poly(glycerophosphate) glycerophosphotransferase NC3_32020 PF04464 CDP-Glycerol:Poly(glycerophosphate) glycerophosphotransferase NC3_32030 PF08240 Alcohol dehydrogenase GroES-like domain NC3_32030 PF16912 Glucose dehydrogenase C-terminus NC3_32040 PF01128 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase NC3_32050 PF02350 UDP-N-acetylglucosamine 2-epimerase NC3_32060 PF00483 Nucleotidyl transferase NC3_32070 PF00005 ABC transporter NC3_32080 PF01061 ABC-2 type transporter NC3_32090 PF04464 CDP-Glycerol:Poly(glycerophosphate) glycerophosphotransferase NC3_32110 PF01467 Cytidylyltransferase-like NC3_32120 PF03808 Glycosyl transferase WecB/TagA/CpsF family NC3_32130 PF04464 CDP-Glycerol:Poly(glycerophosphate) glycerophosphotransferase NC3_32140 PF01832 Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase NC3_32140 PF08239 Bacterial SH3 domain NC3_32140 PF05036 Sporulation related domain NC3_32150 PF01238 Phosphomannose isomerase type I NC3_32160 PF00528 Binding-protein-dependent transport system inner membrane component NC3_32170 PF00528 Binding-protein-dependent transport system inner membrane component NC3_32180 PF01547 Bacterial extracellular solute-binding protein NC3_32190 PF00072 Response regulator receiver domain NC3_32190 PF00196 Bacterial regulatory proteins, luxR family NC3_32200 PF02743 Cache domain NC3_32200 PF00672 HAMP domain NC3_32200 PF06580 Histidine kinase NC3_32200 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase NC3_32220 PF00583 Acetyltransferase (GNAT) family NC3_32230 PF01081 KDPG and KHG aldolase NC3_32240 PF00294 pfkB family carbohydrate kinase NC3_32250 PF00356 Bacterial regulatory proteins, lacI family NC3_32260 PF04962 KduI/IolB family NC3_32280 PF03323 Bacillus/Clostridium GerA spore germination protein NC3_32290 PF03845 Spore germination protein NC3_32300 PF05504 Spore germination B3/ GerAC like, C-terminal NC3_32310 PF00535 Glycosyl transferase family 2 NC3_32310 PF00534 Glycosyl transferases group 1 NC3_32320 PF00083 Sugar (and other) transporter NC3_32330 PF03816 Cell envelope-related transcriptional attenuator domain NC3_32350 PF00877 NlpC/P60 family NC3_32370 PF09587 Bacterial capsule synthesis protein PGA_cap NC3_32380 PF14102 Capsule biosynthesis CapC NC3_32390 PF08245 Mur ligase middle domain NC3_32400 PF03323 Bacillus/Clostridium GerA spore germination protein NC3_32420 PF05504 Spore germination B3/ GerAC like, C-terminal NC3_32430 PF00356 Bacterial regulatory proteins, lacI family NC3_32440 PF00294 pfkB family carbohydrate kinase NC3_32450 PF05025 RbsD / FucU transport protein family NC3_32460 PF00005 ABC transporter NC3_32470 PF02653 Branched-chain amino acid transport system / permease component NC3_32480 PF13407 Periplasmic binding protein domain NC3_32490 PF01613 Flavin reductase like domain NC3_32500 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family NC3_32500 PF03466 LysR substrate binding domain NC3_32510 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain NC3_32510 PF00205 Thiamine pyrophosphate enzyme, central domain NC3_32510 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain NC3_32520 PF03306 Alpha-acetolactate decarboxylase NC3_32530 PF13404 AsnC-type helix-turn-helix domain NC3_32530 PF01037 Lrp/AsnC ligand binding domain NC3_32540 PF02417 Chromate transporter NC3_32550 PF02417 Chromate transporter NC3_32560 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain NC3_32560 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain NC3_32560 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain NC3_32580 PF04434 SWIM zinc finger NC3_32590 PF00176 SNF2 family N-terminal domain NC3_32590 PF12419 SNF2 Helicase protein NC3_32590 PF00271 Helicase conserved C-terminal domain NC3_32600 PF13426 PAS domain NC3_32600 PF01740 STAS domain NC3_32630 PF14183 YwpF-like protein NC3_32640 PF01741 Large-conductance mechanosensitive channel, MscL NC3_32650 PF07977 FabA-like domain NC3_32660 PF18801 response regulator aspartate phosphatase H, N terminal NC3_32670 PF00460 Flagella basal body rod protein NC3_32670 PF06429 Flagellar basal body rod FlgEFG protein C-terminal NC3_32680 PF00460 Flagella basal body rod protein NC3_32680 PF06429 Flagellar basal body rod FlgEFG protein C-terminal NC3_32700 PF12116 Stage III sporulation protein D NC3_32720 PF01047 MarR family NC3_32730 PF07690 Major Facilitator Superfamily NC3_32740 PF01569 PAP2 superfamily NC3_32750 PF07690 Major Facilitator Superfamily NC3_32760 PF00497 Bacterial extracellular solute-binding proteins, family 3 NC3_32770 PF00528 Binding-protein-dependent transport system inner membrane component NC3_32780 PF00005 ABC transporter NC3_32790 PF00909 Ammonium Transporter Family NC3_32800 PF00543 Nitrogen regulatory protein P-II NC3_32810 PF01551 Peptidase family M23 NC3_32820 PF00583 Acetyltransferase (GNAT) family NC3_32850 PF00005 ABC transporter NC3_32900 PF00471 Ribosomal protein L33 NC3_32910 PF02492 CobW/HypB/UreG, nucleotide-binding domain NC3_32910 PF07683 Cobalamin synthesis protein cobW C-terminal domain NC3_32920 PF00253 Ribosomal protein S14p/S29e NC3_32930 PF06463 Molybdenum Cofactor Synthesis C NC3_32930 PF04055 Radical SAM superfamily NC3_32940 PF02634 FdhD/NarQ family NC3_32950 PF07690 Major Facilitator Superfamily NC3_32960 PF00384 Molybdopterin oxidoreductase NC3_32960 PF18364 Molybdopterin oxidoreductase N-terminal domain NC3_32960 PF01568 Molydopterin dinucleotide binding domain NC3_32970 PF00092 von Willebrand factor type A domain NC3_32980 PF00092 von Willebrand factor type A domain NC3_32990 PF08486 Stage II sporulation protein NC3_33000 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) NC3_33010 PF08680 TATA-box binding NC3_33020 PF06612 Protein of unknown function (DUF1146) NC3_33040 PF00401 ATP synthase, Delta/Epsilon chain, long alpha-helix domain NC3_33040 PF02823 ATP synthase, Delta/Epsilon chain, beta-sandwich domain NC3_33050 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain NC3_33050 PF02874 ATP synthase alpha/beta family, beta-barrel domain NC3_33060 PF00231 ATP synthase NC3_33070 PF00306 ATP synthase alpha/beta chain, C terminal domain NC3_33070 PF02874 ATP synthase alpha/beta family, beta-barrel domain NC3_33070 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain NC3_33080 PF00213 ATP synthase delta (OSCP) subunit NC3_33090 PF00430 ATP synthase B/B' CF(0) NC3_33100 PF00137 ATP synthase subunit C NC3_33110 PF00119 ATP synthase A chain NC3_33120 PF03899 ATP synthase I chain NC3_33140 PF00464 Serine hydroxymethyltransferase NC3_33150 PF04260 Protein of unknown function (DUF436) NC3_33160 PF02502 Ribose/Galactose Isomerase NC3_33170 PF01451 Low molecular weight phosphotyrosine protein phosphatase NC3_33180 PF02659 Putative manganese efflux pump NC3_33190 PF03481 Putative GTP-binding controlling metal-binding NC3_33190 PF01300 Telomere recombination NC3_33210 PF09551 Stage II sporulation protein R (spore_II_R) NC3_33230 PF05175 Methyltransferase small domain NC3_33230 PF17827 PrmC N-terminal domain NC3_33240 PF03462 PCRF domain NC3_33240 PF00472 RF-1 domain NC3_33250 PF13411 MerR HTH family regulatory protein NC3_33260 PF03547 Membrane transport protein NC3_33270 PF00390 Malic enzyme, N-terminal domain NC3_33270 PF03949 Malic enzyme, NAD binding domain NC3_33280 PF00265 Thymidine kinase NC3_33290 PF01197 Ribosomal protein L31 NC3_33300 PF07498 Rho termination factor, N-terminal domain NC3_33300 PF07497 Rho termination factor, RNA-binding domain NC3_33300 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain NC3_33310 PF03320 Bacterial fructose-1,6-bisphosphatase, glpX-encoded NC3_33320 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) NC3_33330 PF00923 Transaldolase/Fructose-6-phosphate aldolase NC3_33340 PF01116 Fructose-bisphosphate aldolase class-II NC3_33350 PF00072 Response regulator receiver domain NC3_33360 PF10740 Domain of unknown function (DUF2529) NC3_33370 PF06418 CTP synthase N-terminus NC3_33370 PF00117 Glutamine amidotransferase class-I NC3_33380 PF05066 HB1, ASXL, restriction endonuclease HTH domain NC3_33410 PF00441 Acyl-CoA dehydrogenase, C-terminal domain NC3_33410 PF02770 Acyl-CoA dehydrogenase, middle domain NC3_33410 PF02771 Acyl-CoA dehydrogenase, N-terminal domain NC3_33420 PF02771 Acyl-CoA dehydrogenase, N-terminal domain NC3_33420 PF00441 Acyl-CoA dehydrogenase, C-terminal domain NC3_33420 PF02770 Acyl-CoA dehydrogenase, middle domain NC3_33430 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain NC3_33430 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain NC3_33440 PF02803 Thiolase, C-terminal domain NC3_33440 PF00108 Thiolase, N-terminal domain NC3_33450 PF02754 Cysteine-rich domain NC3_33450 PF13183 4Fe-4S dicluster domain NC3_33460 PF13091 PLD-like domain NC3_33470 PF03851 UV-endonuclease UvdE NC3_33490 PF02016 LD-carboxypeptidase N-terminal domain NC3_33490 PF17676 LD-carboxypeptidase C-terminal domain NC3_33510 PF00664 ABC transporter transmembrane region NC3_33510 PF00005 ABC transporter NC3_33520 PF13091 PLD-like domain NC3_33520 PF13396 Phospholipase_D-nuclease N-terminal NC3_33530 PF02016 LD-carboxypeptidase N-terminal domain NC3_33530 PF17676 LD-carboxypeptidase C-terminal domain NC3_33540 PF03485 Arginyl tRNA synthetase N terminal domain NC3_33540 PF05746 DALR anticodon binding domain NC3_33540 PF00750 tRNA synthetases class I (R) NC3_33550 PF09148 Domain of unknown function (DUF1934) NC3_33570 PF00491 Arginase family NC3_33580 PF17284 Spermidine synthase tetramerisation domain NC3_33590 PF00912 Transglycosylase NC3_33590 PF00905 Penicillin binding protein transpeptidase domain NC3_33600 PF08741 YwhD family NC3_33610 PF02163 Peptidase family M50 NC3_33620 PF01361 Tautomerase enzyme NC3_33640 PF00296 Luciferase-like monooxygenase NC3_33650 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family NC3_33650 PF03466 LysR substrate binding domain NC3_33660 PF03358 NADPH-dependent FMN reductase NC3_33670 PF00296 Luciferase-like monooxygenase NC3_33680 PF00462 Glutaredoxin NC3_33690 PF00583 Acetyltransferase (GNAT) family NC3_33700 PF00528 Binding-protein-dependent transport system inner membrane component NC3_33720 PF00528 Binding-protein-dependent transport system inner membrane component NC3_33730 PF00005 ABC transporter NC3_33750 PF01966 HD domain NC3_33760 PF07293 Protein of unknown function (DUF1450) NC3_33790 PF07238 PilZ domain NC3_33790 PF00535 Glycosyl transferase family 2 NC3_33810 PF03099 Biotin/lipoate A/B protein ligase family NC3_33880 PF04740 LXG domain of WXG superfamily NC3_33880 PF14449 Pre-toxin TG NC3_33940 PF03737 Aldolase/RraA NC3_33960 PF01515 Phosphate acetyl/butaryl transferase NC3_33970 PF06778 Chlorite dismutase NC3_33980 PF07690 Major Facilitator Superfamily NC3_33990 PF01037 Lrp/AsnC ligand binding domain NC3_34000 PF07690 Major Facilitator Superfamily NC3_34020 PF07883 Cupin domain NC3_34050 PF00155 Aminotransferase class I and II NC3_34080 PF00908 dTDP-4-dehydrorhamnose 3,5-epimerase NC3_34090 PF04321 RmlD substrate binding domain NC3_34100 PF16363 GDP-mannose 4,6 dehydratase NC3_34110 PF00483 Nucleotidyl transferase NC3_34120 PF04101 Glycosyltransferase family 28 C-terminal domain NC3_34130 PF02348 Cytidylyltransferase NC3_34140 PF03102 NeuB family NC3_34140 PF08666 SAF domain NC3_34150 PF00583 Acetyltransferase (GNAT) family NC3_34160 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family NC3_34170 PF04464 CDP-Glycerol:Poly(glycerophosphate) glycerophosphotransferase NC3_34180 PF00535 Glycosyl transferase family 2 NC3_34200 PF09671 Spore coat protein (Spore_GerQ) NC3_34220 PF04241 Protein of unknown function (DUF423) NC3_34230 PF00860 Permease family NC3_34240 PF17261 Family of unknown function (DUF5327) NC3_34250 PF00171 Aldehyde dehydrogenase family NC3_34260 PF03167 Uracil DNA glycosylase superfamily NC3_34270 PF00535 Glycosyl transferase family 2 NC3_34290 PF08543 Phosphomethylpyrimidine kinase NC3_34360 PF08244 Glycosyl hydrolases family 32 C terminal NC3_34360 PF00251 Glycosyl hydrolases family 32 N-terminal domain NC3_34370 PF00367 phosphotransferase system, EIIB NC3_34370 PF02378 Phosphotransferase system, EIIC NC3_34380 PF03123 CAT RNA binding domain NC3_34380 PF00874 PRD domain NC3_34400 PF00082 Subtilase family NC3_34400 PF05922 Peptidase inhibitor I9 NC3_34400 PF02225 PA domain NC3_34400 PF13860 FlgD Ig-like domain NC3_34410 PF00296 Luciferase-like monooxygenase NC3_34420 PF00881 Nitroreductase family NC3_34430 PF01098 Cell cycle protein NC3_34440 PF17368 Spore morphogenesis and germination YwcE NC3_34450 PF03626 Prokaryotic Cytochrome C oxidase subunit IV NC3_34460 PF00510 Cytochrome c oxidase subunit III NC3_34470 PF00115 Cytochrome C and Quinol oxidase polypeptide I NC3_34480 PF00116 Cytochrome C oxidase subunit II, periplasmic domain NC3_34480 PF02790 Cytochrome C oxidase subunit II, transmembrane domain NC3_34500 PF02744 Galactose-1-phosphate uridyl transferase, C-terminal domain NC3_34500 PF01087 Galactose-1-phosphate uridyl transferase, N-terminal domain NC3_34510 PF16363 GDP-mannose 4,6 dehydratase NC3_34520 PF10509 Galactokinase galactose-binding signature NC3_34520 PF00288 GHMP kinases N terminal domain NC3_34520 PF08544 GHMP kinases C terminal NC3_34550 PF04138 GtrA-like protein NC3_34590 PF04341 Protein of unknown function, DUF485 NC3_34600 PF00474 Sodium:solute symporter family NC3_34640 PF02581 Thiamine monophosphate synthase NC3_34650 PF02110 Hydroxyethylthiazole kinase family NC3_34660 PF03466 LysR substrate binding domain NC3_34660 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family NC3_34670 PF03788 LrgA family NC3_34680 PF04172 LrgB-like family NC3_34690 PF10672 S-adenosylmethionine-dependent methyltransferase NC3_34690 PF17785 PUA-like domain NC3_34700 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily NC3_34710 PF00005 ABC transporter NC3_34720 PF00528 Binding-protein-dependent transport system inner membrane component NC3_34730 PF00497 Bacterial extracellular solute-binding proteins, family 3 NC3_34740 PF18801 response regulator aspartate phosphatase H, N terminal NC3_34760 PF04607 Region found in RelA / SpoT proteins NC3_34770 PF02653 Branched-chain amino acid transport system / permease component NC3_34780 PF00005 ABC transporter NC3_34790 PF13407 Periplasmic binding protein domain NC3_34800 PF13229 Right handed beta helix region NC3_34810 PF01063 Amino-transferase class IV NC3_34830 PF11975 Family 4 glycosyl hydrolase C-terminal domain NC3_34830 PF02056 Family 4 glycosyl hydrolase NC3_34840 PF02255 PTS system, Lactose/Cellobiose specific IIA subunit NC3_34850 PF02378 Phosphotransferase system, EIIC NC3_34860 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit NC3_34870 PF05043 Mga helix-turn-helix domain NC3_34870 PF08279 HTH domain NC3_34870 PF00874 PRD domain NC3_34870 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 NC3_34900 PF00208 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase NC3_34900 PF02812 Glu/Leu/Phe/Val dehydrogenase, dimerisation domain NC3_34940 PF08281 Sigma-70, region 4 NC3_34940 PF04542 Sigma-70 region 2 NC3_34950 PF00544 Pectate lyase NC3_34960 PF00005 ABC transporter NC3_34960 PF00664 ABC transporter transmembrane region NC3_34970 PF00005 ABC transporter NC3_34970 PF00664 ABC transporter transmembrane region NC3_34980 PF02322 Cytochrome bd terminal oxidase subunit II NC3_34990 PF01654 Cytochrome bd terminal oxidase subunit I NC3_35000 PF00005 ABC transporter NC3_35010 PF01032 FecCD transport family NC3_35020 PF01497 Periplasmic binding protein NC3_35030 PF04203 Sortase domain NC3_35040 PF00005 ABC transporter NC3_35050 PF01032 FecCD transport family NC3_35060 PF01497 Periplasmic binding protein NC3_35080 PF05031 Iron Transport-associated domain NC3_35090 PF05031 Iron Transport-associated domain NC3_35100 PF01638 HxlR-like helix-turn-helix NC3_35110 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily NC3_35120 PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase NC3_35120 PF00925 GTP cyclohydrolase II NC3_35130 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region NC3_35130 PF01872 RibD C-terminal domain NC3_35150 PF01522 Polysaccharide deacetylase NC3_35160 PF02255 PTS system, Lactose/Cellobiose specific IIA subunit NC3_35170 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit NC3_35180 PF00232 Glycosyl hydrolase family 1 NC3_35190 PF03786 D-mannonate dehydratase (UxuA) NC3_35200 PF02378 Phosphotransferase system, EIIC NC3_35210 PF05043 Mga helix-turn-helix domain NC3_35210 PF00874 PRD domain NC3_35210 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 NC3_35210 PF08279 HTH domain NC3_35260 PF03553 Na+/H+ antiporter family NC3_35270 PF00206 Lyase NC3_35270 PF10415 Fumarase C C-terminus NC3_35280 PF17763 Glutaminase/Asparaginase C-terminal domain NC3_35280 PF00710 Asparaginase, N-terminal NC3_35290 PF01381 Helix-turn-helix NC3_35310 PF17353 Family of unknown function (DUF5381) NC3_35340 PF06013 Proteins of 100 residues with WXG NC3_35350 PF07687 Peptidase dimerisation domain NC3_35350 PF01546 Peptidase family M20/M25/M40 NC3_35380 PF01380 SIS domain NC3_35380 PF01418 Helix-turn-helix domain, rpiR family NC3_35390 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase NC3_35390 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase NC3_35410 PF02447 GntP family permease NC3_35420 PF01717 Cobalamin-independent synthase, Catalytic domain NC3_35440 PF00005 ABC transporter NC3_35450 PF00232 Glycosyl hydrolase family 1 NC3_35460 PF02378 Phosphotransferase system, EIIC NC3_35460 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 NC3_35460 PF00367 phosphotransferase system, EIIB NC3_35470 PF00874 PRD domain NC3_35470 PF03123 CAT RNA binding domain NC3_35490 PF09234 Domain of unknown function (DUF1963) NC3_35510 PF02361 Cobalt transport protein NC3_35520 PF00005 ABC transporter NC3_35530 PF09819 ABC-type cobalt transport system, permease component NC3_35540 PF03070 TENA/THI-4/PQQC family NC3_35600 PF05547 Immune inhibitor A peptidase M6 NC3_35600 PF00801 PKD domain NC3_35610 PF03992 Antibiotic biosynthesis monooxygenase NC3_35620 PF00881 Nitroreductase family NC3_35630 PF01047 MarR family NC3_35640 PF07831 Pyrimidine nucleoside phosphorylase C-terminal domain NC3_35640 PF02885 Glycosyl transferase family, helical bundle domain NC3_35640 PF00591 Glycosyl transferase family, a/b domain NC3_35650 PF07662 Na+ dependent nucleoside transporter C-terminus NC3_35650 PF01773 Na+ dependent nucleoside transporter N-terminus NC3_35660 PF01791 DeoC/LacD family aldolase NC3_35670 PF04198 Putative sugar-binding domain NC3_35690 PF01757 Acyltransferase family NC3_35700 PF07690 Major Facilitator Superfamily NC3_35710 PF00745 Glutamyl-tRNAGlu reductase, dimerisation domain NC3_35710 PF05201 Glutamyl-tRNAGlu reductase, N-terminal domain NC3_35710 PF01488 Shikimate / quinate 5-dehydrogenase NC3_35720 PF13649 Methyltransferase domain NC3_35730 PF00196 Bacterial regulatory proteins, luxR family NC3_35730 PF00072 Response regulator receiver domain NC3_35750 PF13411 MerR HTH family regulatory protein NC3_35760 PF01408 Oxidoreductase family, NAD-binding Rossmann fold NC3_35770 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain NC3_35780 PF00324 Amino acid permease NC3_35790 PF08713 DNA alkylation repair enzyme NC3_35800 PF02447 GntP family permease NC3_35810 PF00370 FGGY family of carbohydrate kinases, N-terminal domain NC3_35810 PF02782 FGGY family of carbohydrate kinases, C-terminal domain NC3_35820 PF01418 Helix-turn-helix domain, rpiR family NC3_35820 PF01380 SIS domain NC3_35830 PF01156 Inosine-uridine preferring nucleoside hydrolase NC3_35900 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family NC3_35900 PF03466 LysR substrate binding domain NC3_35910 PF00356 Bacterial regulatory proteins, lacI family NC3_35920 PF13416 Bacterial extracellular solute-binding protein NC3_35930 PF00528 Binding-protein-dependent transport system inner membrane component NC3_35940 PF00528 Binding-protein-dependent transport system inner membrane component NC3_35950 PF07745 Glycosyl hydrolase family 53 NC3_35960 PF08533 Beta-galactosidase C-terminal domain NC3_35960 PF08532 Beta-galactosidase trimerisation domain NC3_35960 PF02449 Beta-galactosidase NC3_35970 PF03600 Citrate transporter NC3_35990 PF12679 ABC-2 family transporter protein NC3_36000 PF00005 ABC transporter NC3_36010 PF03831 PhnA domain NC3_36010 PF08274 PhnA Zinc-Ribbon NC3_36030 PF02595 Glycerate kinase family NC3_36040 PF02447 GntP family permease NC3_36050 PF13556 PucR C-terminal helix-turn-helix domain NC3_36050 PF17853 GGDEF-like domain NC3_36050 PF05651 Putative sugar diacid recognition NC3_36060 PF17922 Tetracyclin repressor-like, C-terminal domain NC3_36060 PF00440 Bacterial regulatory proteins, tetR family NC3_36070 PF07690 Major Facilitator Superfamily NC3_36090 PF00005 ABC transporter NC3_36110 PF18801 response regulator aspartate phosphatase H, N terminal NC3_36120 PF03123 CAT RNA binding domain NC3_36120 PF00874 PRD domain NC3_36130 PF00232 Glycosyl hydrolase family 1 NC3_36140 PF00367 phosphotransferase system, EIIB NC3_36140 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 NC3_36140 PF02378 Phosphotransferase system, EIIC NC3_36190 PF00293 NUDIX domain NC3_36220 PF00324 Amino acid permease NC3_36230 PF00356 Bacterial regulatory proteins, lacI family NC3_36240 PF07690 Major Facilitator Superfamily NC3_36250 PF08501 Shikimate dehydrogenase substrate binding domain NC3_36250 PF18317 Shikimate 5'-dehydrogenase C-terminal domain NC3_36260 PF07690 Major Facilitator Superfamily NC3_36360 PF18593 CdiI immunity protein NC3_36370 PF14449 Pre-toxin TG NC3_36370 PF04740 LXG domain of WXG superfamily NC3_36370 PF14410 HNH/ENDO VII superfamily nuclease with conserved GHE residues NC3_36390 PF00232 Glycosyl hydrolase family 1 NC3_36400 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 NC3_36400 PF00367 phosphotransferase system, EIIB NC3_36400 PF02378 Phosphotransferase system, EIIC NC3_36410 PF07702 UTRA domain NC3_36410 PF00392 Bacterial regulatory proteins, gntR family NC3_36430 PF02567 Phenazine biosynthesis-like protein NC3_36440 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family NC3_36440 PF03466 LysR substrate binding domain NC3_36480 PF13545 Crp-like helix-turn-helix domain NC3_36480 PF00027 Cyclic nucleotide-binding domain NC3_36510 PF00753 Metallo-beta-lactamase superfamily NC3_36510 PF16123 Hydroxyacylglutathione hydrolase C-terminus NC3_36520 PF09019 EcoRII C terminal NC3_36530 PF00145 C-5 cytosine-specific DNA methylase NC3_36530 PF01381 Helix-turn-helix NC3_36550 PF02590 Predicted SPOUT methyltransferase NC3_36560 PF14116 YyzF-like protein NC3_36570 PF02361 Cobalt transport protein NC3_36580 PF12558 ATP-binding cassette cobalt transporter NC3_36580 PF00005 ABC transporter NC3_36590 PF07155 ECF-type riboflavin transporter, S component NC3_36620 PF00005 ABC transporter NC3_36630 PF00583 Acetyltransferase (GNAT) family NC3_36640 PF13180 PDZ domain NC3_36650 PF00753 Metallo-beta-lactamase superfamily NC3_36660 PF09648 YycH protein NC3_36670 PF07435 YycH protein NC3_36680 PF00672 HAMP domain NC3_36680 PF00512 His Kinase A (phospho-acceptor) domain NC3_36680 PF13426 PAS domain NC3_36680 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase NC3_36690 PF00072 Response regulator receiver domain NC3_36690 PF00486 Transcriptional regulatory protein, C terminal NC3_36700 PF00578 AhpC/TSA family NC3_36720 PF04235 Protein of unknown function (DUF418) NC3_36730 PF00709 Adenylosuccinate synthetase NC3_36750 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily NC3_36760 PF00772 DnaB-like helicase N terminal domain NC3_36760 PF03796 DnaB-like helicase C terminal domain NC3_36770 PF16226 Domain of unknown function (DUF4885) NC3_36790 PF00756 Putative esterase NC3_36800 PF01497 Periplasmic binding protein NC3_36800 PF12833 Helix-turn-helix domain NC3_36810 PF01497 Periplasmic binding protein NC3_36820 PF00756 Putative esterase NC3_36830 PF14174 YycC-like protein NC3_36840 PF07690 Major Facilitator Superfamily NC3_36850 PF01281 Ribosomal protein L9, N-terminal domain NC3_36850 PF03948 Ribosomal protein L9, C-terminal domain NC3_36860 PF02272 DHHA1 domain NC3_36860 PF01368 DHH family NC3_36870 PF09991 Predicted membrane protein (DUF2232) NC3_36880 PF02833 DHHA2 domain NC3_36880 PF01368 DHH family NC3_36890 PF11738 Protein of unknown function (DUF3298) NC3_36890 PF13739 Deacetylase PdaC NC3_36900 PF08281 Sigma-70, region 4 NC3_36900 PF04542 Sigma-70 region 2 NC3_36920 PF06628 Catalase-related immune-responsive NC3_36920 PF00199 Catalase NC3_36930 PF03358 NADPH-dependent FMN reductase NC3_36940 PF01738 Dienelactone hydrolase family NC3_36950 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily NC3_36960 PF00528 Binding-protein-dependent transport system inner membrane component NC3_36970 PF00571 CBS domain NC3_36970 PF00005 ABC transporter NC3_36980 PF01084 Ribosomal protein S18 NC3_36990 PF00436 Single-strand binding protein family NC3_37000 PF01250 Ribosomal protein S6 NC3_37010 PF01926 50S ribosome-binding GTPase NC3_37010 PF06071 Protein of unknown function (DUF933) NC3_37020 PF06107 Bacterial protein of unknown function (DUF951) NC3_37060 PF06866 Protein of unknown function (DUF1256) NC3_37070 PF17762 HTH domain found in ParB protein NC3_37070 PF02195 ParB-like nuclease domain NC3_37080 PF13614 AAA domain NC3_37100 PF02195 ParB-like nuclease domain NC3_37100 PF17762 HTH domain found in ParB protein NC3_37110 PF02527 rRNA small subunit methyltransferase G NC3_37120 PF01134 Glucose inhibited division protein A NC3_37120 PF13932 GidA associated domain NC3_37130 PF01926 50S ribosome-binding GTPase NC3_37130 PF12631 MnmE helical domain NC3_37130 PF10396 GTP-binding protein TrmE N-terminus NC3_37140 PF14804 Jag N-terminus NC3_37140 PF01424 R3H domain NC3_37150 PF02096 60Kd inner membrane protein NC3_37160 PF00825 Ribonuclease P NC3_37170 PF00468 Ribosomal protein L34