CSE15_00005 SM00382 ATPases associated with a variety of cellular activities CSE15_00005 SM00760 Bacterial dnaA protein helix-turn-helix domain CSE15_00010 SM00480 DNA polymerase III beta subunit CSE15_00030 SM00387 Histidine kinase-like ATPases CSE15_00030 SM00433 TopoisomeraseII CSE15_00035 SM00434 DNA Topoisomerase IV CSE15_00070 SM00116 Domain in cystathionine beta-synthase and other proteins. CSE15_00070 SM01240 CSE15_00070 CSE15_00075 SM00936 Penicillin-binding protein 5, C-terminal domain CSE15_00080 SM00345 helix_turn_helix gluconate operon transcriptional repressor CSE15_00100 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). CSE15_00120 SM00257 Lysin motif CSE15_00120 SM00636 CSE15_00120 CSE15_00140 SM00382 ATPases associated with a variety of cellular activities CSE15_00150 SM00493 CSE15_00150 CSE15_00245 SM00465 GIY-YIG type nucleases (URI domain) CSE15_00255 SM00966 SpoVT / AbrB like domain CSE15_00275 SM01208 CSE15_00275 CSE15_00285 SM00650 Ribosomal RNA adenine dimethylases CSE15_00330 SM01400 CSE15_00330 CSE15_00350 SM00487 DEAD-like helicases superfamily CSE15_00350 SM00490 helicase superfamily c-terminal domain CSE15_00350 SM00982 CSE15_00350 CSE15_00350 SM01058 CarD-like/TRCF domain CSE15_00355 SM00966 SpoVT / AbrB like domain CSE15_00370 SM00363 S4 RNA-binding domain CSE15_00390 SM00316 Ribosomal protein S1-like RNA-binding domain CSE15_00405 SM00331 Sigma factor PP2C-like phosphatases CSE15_00405 SM00332 Serine/threonine phosphatases, family 2C, catalytic domain CSE15_00420 SM00977 TilS substrate C-terminal domain CSE15_00430 SM00382 ATPases associated with a variety of cellular activities CSE15_00475 SM00905 Dihydroneopterin aldolase CSE15_00485 SM00530 Helix-turn-helix XRE-family like proteins CSE15_00590 SM00382 ATPases associated with a variety of cellular activities CSE15_00590 SM01086 C-terminal, D2-small domain, of ClpB protein CSE15_00595 SM00382 ATPases associated with a variety of cellular activities CSE15_00605 SM00670 Large family of predicted nucleotide-binding domains CSE15_00630 SM00840 CSE15_00630 CSE15_00635 SM00535 Ribonuclease III family CSE15_00640 SM00967 RNA 2'-O ribose methyltransferase substrate binding CSE15_00665 SM00738 In Spt5p, this domain may confer affinity for Spt4p. It possesses a RNP-like fold. CSE15_00665 SM00739 KOW (Kyprides, Ouzounis, Woese) motif. CSE15_00670 SM00649 Ribosomal protein L11/L12 CSE15_00700 SM00663 RNA polymerase I subunit A N-terminus CSE15_00720 SM00838 Elongation factor G C-terminus CSE15_00720 SM00889 Elongation factor G, domain IV CSE15_00735 SM01403 CSE15_00735 CSE15_00755 SM01382 CSE15_00755 CSE15_00755 SM01383 CSE15_00755 CSE15_00770 SM00322 K homology RNA-binding domain CSE15_00790 SM01374 CSE15_00790 CSE15_00795 SM00739 KOW (Kyprides, Ouzounis, Woese) motif. CSE15_00860 SM00316 Ribosomal protein S1-like RNA-binding domain CSE15_00880 SM00662 RNA polymerases D CSE15_00890 SM00382 ATPases associated with a variety of cellular activities CSE15_00895 SM00382 ATPases associated with a variety of cellular activities CSE15_00925 SM00530 Helix-turn-helix XRE-family like proteins CSE15_00995 SM00646 CSE15_00995 CSE15_01010 SM01251 CSE15_01010 CSE15_01160 SM00382 ATPases associated with a variety of cellular activities CSE15_01170 SM00382 ATPases associated with a variety of cellular activities CSE15_01190 SM00382 ATPases associated with a variety of cellular activities CSE15_01220 SM00345 helix_turn_helix gluconate operon transcriptional repressor CSE15_01225 SM00382 ATPases associated with a variety of cellular activities CSE15_01235 SM00530 Helix-turn-helix XRE-family like proteins CSE15_01250 SM00342 helix_turn_helix, arabinose operon control protein CSE15_01325 SM00825 Beta-ketoacyl synthase CSE15_01330 SM00530 Helix-turn-helix XRE-family like proteins CSE15_01345 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor CSE15_01370 SM00450 Rhodanese Homology Domain CSE15_01375 SM00450 Rhodanese Homology Domain CSE15_01380 SM00450 Rhodanese Homology Domain CSE15_01380 SM00849 Metallo-beta-lactamase superfamily CSE15_01395 SM00946 Prolyl-tRNA synthetase, C-terminal CSE15_01415 SM00347 helix_turn_helix multiple antibiotic resistance protein CSE15_01450 SM00450 Rhodanese Homology Domain CSE15_01465 SM01061 CAT RNA binding domain CSE15_01500 SM00872 Alpha mannosidase, middle domain CSE15_01605 SM00347 helix_turn_helix multiple antibiotic resistance protein CSE15_01645 SM00387 Histidine kinase-like ATPases CSE15_01650 SM00448 cheY-homologous receiver domain CSE15_01665 SM00421 helix_turn_helix, Lux Regulon CSE15_01665 SM00448 cheY-homologous receiver domain CSE15_01685 SM00387 Histidine kinase-like ATPases CSE15_01690 SM00448 cheY-homologous receiver domain CSE15_01690 SM00850 LytTr DNA-binding domain CSE15_01695 SM00382 ATPases associated with a variety of cellular activities CSE15_01790 SM00116 Domain in cystathionine beta-synthase and other proteins. CSE15_01790 SM00382 ATPases associated with a variety of cellular activities CSE15_01835 SM00354 helix_turn _helix lactose operon repressor CSE15_01935 SM00346 helix_turn_helix isocitrate lyase regulation CSE15_01945 SM01130 CSE15_01945 CSE15_01950 SM00354 helix_turn _helix lactose operon repressor CSE15_02020 SM00062 Bacterial periplasmic substrate-binding proteins CSE15_02035 SM00344 helix_turn_helix ASNC type CSE15_02050 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). CSE15_02050 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain CSE15_02080 SM00382 ATPases associated with a variety of cellular activities CSE15_02095 SM00823 Phosphopantetheine attachment site CSE15_02100 SM00823 Phosphopantetheine attachment site CSE15_02105 SM00823 Phosphopantetheine attachment site CSE15_02110 SM00822 CSE15_02110 CSE15_02110 SM00823 Phosphopantetheine attachment site CSE15_02115 SM00822 CSE15_02115 CSE15_02115 SM00823 Phosphopantetheine attachment site CSE15_02120 SM00824 Thioesterase CSE15_02125 SM00382 ATPases associated with a variety of cellular activities CSE15_02140 SM00345 helix_turn_helix gluconate operon transcriptional repressor CSE15_02150 SM00342 helix_turn_helix, arabinose operon control protein CSE15_02150 SM00871 Bacterial transcription activator, effector binding domain CSE15_02165 SM00382 ATPases associated with a variety of cellular activities CSE15_02175 SM00062 Bacterial periplasmic substrate-binding proteins CSE15_02195 SM00710 Parallel beta-helix repeats CSE15_02210 SM00062 Bacterial periplasmic substrate-binding proteins CSE15_02210 SM00079 Eukaryotic homologues of bacterial periplasmic substrate binding proteins. CSE15_02220 SM00382 ATPases associated with a variety of cellular activities CSE15_02240 SM00857 Resolvase, N terminal domain CSE15_02260 SM00448 cheY-homologous receiver domain CSE15_02260 SM00862 Transcriptional regulatory protein, C terminal CSE15_02265 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain CSE15_02265 SM00387 Histidine kinase-like ATPases CSE15_02265 SM00388 His Kinase A (phosphoacceptor) domain CSE15_02270 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. CSE15_02295 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor CSE15_02310 SM00345 helix_turn_helix gluconate operon transcriptional repressor CSE15_02360 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). CSE15_02360 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain CSE15_02360 SM01049 CSE15_02360 CSE15_02375 SM00900 CSE15_02375 CSE15_02400 SM00894 Excalibur calcium-binding domain CSE15_02425 SM00796 Allophanate hydrolase subunit 1 CSE15_02430 SM00797 Allophanate hydrolase subunit 2 CSE15_02435 SM00346 helix_turn_helix isocitrate lyase regulation CSE15_02500 SM00345 helix_turn_helix gluconate operon transcriptional repressor CSE15_02500 SM00895 CSE15_02500 CSE15_02505 SM00342 helix_turn_helix, arabinose operon control protein CSE15_02515 SM01329 CSE15_02515 CSE15_02520 SM00436 Bacterial DNA topoisomeraes I ATP-binding domain CSE15_02520 SM00437 Bacterial DNA topoisomerase I DNA-binding domain CSE15_02520 SM00493 CSE15_02520 CSE15_02530 SM00267 diguanylate cyclase CSE15_02605 SM00091 PAS domain CSE15_02605 SM00387 Histidine kinase-like ATPases CSE15_02610 SM00448 cheY-homologous receiver domain CSE15_02630 SM00382 ATPases associated with a variety of cellular activities CSE15_02675 SM00487 DEAD-like helicases superfamily CSE15_02675 SM00490 helicase superfamily c-terminal domain CSE15_02705 SM01005 Alanine racemase, C-terminal domain CSE15_02735 SM00331 Sigma factor PP2C-like phosphatases CSE15_02755 SM00331 Sigma factor PP2C-like phosphatases CSE15_02755 SM00332 Serine/threonine phosphatases, family 2C, catalytic domain CSE15_02760 SM00316 Ribosomal protein S1-like RNA-binding domain CSE15_02760 SM00732 Likely ribonuclease with RNase H fold. CSE15_02770 SM00731 SprT homologues. CSE15_02780 SM00861 Transketolase, pyrimidine binding domain CSE15_02795 SM00382 ATPases associated with a variety of cellular activities CSE15_02865 SM00357 Cold shock protein domain CSE15_02880 SM00829 Enoylreductase CSE15_02885 SM00422 helix_turn_helix, mercury resistance CSE15_02905 SM00028 Tetratricopeptide repeats CSE15_02905 SM00530 Helix-turn-helix XRE-family like proteins CSE15_02945 SM00870 CSE15_02945 CSE15_02955 SM00347 helix_turn_helix multiple antibiotic resistance protein CSE15_02980 SM00850 LytTr DNA-binding domain CSE15_03025 SM00347 helix_turn_helix multiple antibiotic resistance protein CSE15_03045 SM00530 Helix-turn-helix XRE-family like proteins CSE15_03160 SM00382 ATPases associated with a variety of cellular activities CSE15_03170 SM00881 CoA binding domain CSE15_03200 SM00883 Chaperonin 10 Kd subunit CSE15_03210 SM00347 helix_turn_helix multiple antibiotic resistance protein CSE15_03220 SM00287 Bacterial SH3 domain homologues CSE15_03285 SM00460 Transglutaminase/protease-like homologues CSE15_03300 SM00342 helix_turn_helix, arabinose operon control protein CSE15_03305 SM00917 LeuA allosteric (dimerisation) domain CSE15_03310 SM00342 helix_turn_helix, arabinose operon control protein CSE15_03385 SM01001 AIR carboxylase CSE15_03395 SM00998 Adenylosuccinate lyase C-terminus CSE15_03410 SM01211 CSE15_03410 CSE15_03435 SM00798 AICARFT/IMPCHase bienzyme CSE15_03435 SM00851 MGS-like domain CSE15_03440 SM01209 CSE15_03440 CSE15_03440 SM01210 CSE15_03440 CSE15_03465 SM00882 Coenzyme A transferase CSE15_03470 SM00882 Coenzyme A transferase CSE15_03525 SM00278 Helix-hairpin-helix DNA-binding motif class 1 CSE15_03525 SM00292 breast cancer carboxy-terminal domain CSE15_03525 SM00532 Ligase N family CSE15_03565 SM00845 GatB domain CSE15_03585 SM00046 Diacylglycerol kinase catalytic domain (presumed) CSE15_03600 SM00860 SMI1 / KNR4 family CSE15_03745 SM00382 ATPases associated with a variety of cellular activities CSE15_03755 SM00422 helix_turn_helix, mercury resistance CSE15_03765 SM00382 ATPases associated with a variety of cellular activities CSE15_03770 SM00487 DEAD-like helicases superfamily CSE15_03770 SM00490 helicase superfamily c-terminal domain CSE15_03775 SM00829 Enoylreductase CSE15_03805 SM00320 WD40 repeats CSE15_03825 SM00448 cheY-homologous receiver domain CSE15_03840 SM00631 CSE15_03840 CSE15_03920 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). CSE15_03920 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain CSE15_03935 SM00642 Alpha-amylase domain CSE15_03940 SM00345 helix_turn_helix gluconate operon transcriptional repressor CSE15_03940 SM00866 CSE15_03940 CSE15_03975 SM00226 Low molecular weight phosphatase family CSE15_04065 SM00478 endonuclease III CSE15_04100 SM00422 helix_turn_helix, mercury resistance CSE15_04100 SM00871 Bacterial transcription activator, effector binding domain CSE15_04120 SM00863 Threonyl and Alanyl tRNA synthetase second additional domain CSE15_04205 SM00342 helix_turn_helix, arabinose operon control protein CSE15_04215 SM00382 ATPases associated with a variety of cellular activities CSE15_04240 SM00829 Enoylreductase CSE15_04255 SM00347 helix_turn_helix multiple antibiotic resistance protein CSE15_04275 SM00530 Helix-turn-helix XRE-family like proteins CSE15_04350 SM00835 Cupin CSE15_04375 SM00478 endonuclease III CSE15_04410 SM00382 ATPases associated with a variety of cellular activities CSE15_04415 SM00382 ATPases associated with a variety of cellular activities CSE15_04575 SM00855 Phosphoglycerate mutase family CSE15_04620 SM00382 ATPases associated with a variety of cellular activities CSE15_04625 SM00062 Bacterial periplasmic substrate-binding proteins CSE15_04645 SM00382 ATPases associated with a variety of cellular activities CSE15_04680 SM00567 E-Z type HEAT repeats CSE15_04695 SM00763 PrkA AAA domain CSE15_04725 SM00357 Cold shock protein domain CSE15_04735 SM00267 diguanylate cyclase CSE15_04765 SM00138 Methyltransferase, chemotaxis proteins CSE15_04765 SM00387 Histidine kinase-like ATPases CSE15_04765 SM00388 His Kinase A (phosphoacceptor) domain CSE15_04770 SM00318 Staphylococcal nuclease homologues CSE15_04850 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. CSE15_04855 SM00421 helix_turn_helix, Lux Regulon CSE15_04855 SM00448 cheY-homologous receiver domain CSE15_04870 SM01060 CSE15_04870 CSE15_04890 SM00098 Alkaline phosphatase homologues CSE15_04895 SM00257 Lysin motif CSE15_04920 SM00563 Phosphate acyltransferases CSE15_04925 SM01091 Transporter associated domain CSE15_04930 SM00422 helix_turn_helix, mercury resistance CSE15_04935 SM01091 Transporter associated domain CSE15_04990 SM00382 ATPases associated with a variety of cellular activities CSE15_04995 SM00382 ATPases associated with a variety of cellular activities CSE15_05010 SM00382 ATPases associated with a variety of cellular activities CSE15_05050 SM00729 Elongator protein 3, MiaB family, Radical SAM CSE15_05095 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. CSE15_05135 SM00347 helix_turn_helix multiple antibiotic resistance protein CSE15_05165 SM00382 ATPases associated with a variety of cellular activities CSE15_05245 SM00849 Metallo-beta-lactamase superfamily CSE15_05280 SM00855 Phosphoglycerate mutase family CSE15_05285 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). CSE15_05300 SM00914 CSE15_05300 CSE15_05310 SM01119 CSE15_05310 CSE15_05345 SM00382 ATPases associated with a variety of cellular activities CSE15_05525 SM00342 helix_turn_helix, arabinose operon control protein CSE15_05560 SM01006 Siderophore biosynthesis protein domain CSE15_05585 SM01018 B12 binding domain CSE15_05600 SM00316 Ribosomal protein S1-like RNA-binding domain CSE15_05615 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). CSE15_05615 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain CSE15_05670 SM00859 Semialdehyde dehydrogenase, NAD binding domain CSE15_05690 SM01097 Carbamoyl-phosphate synthase small chain, CPSase domain CSE15_05750 SM00825 Beta-ketoacyl synthase CSE15_05760 SM00382 ATPases associated with a variety of cellular activities CSE15_05765 SM00382 ATPases associated with a variety of cellular activities CSE15_05810 SM00382 ATPases associated with a variety of cellular activities CSE15_05815 SM00382 ATPases associated with a variety of cellular activities CSE15_05845 SM00155 Phospholipase D. Active site motifs. CSE15_05880 SM01118 CSE15_05880 CSE15_05890 SM00954 Region found in RelA / SpoT proteins CSE15_06100 SM00347 helix_turn_helix multiple antibiotic resistance protein CSE15_06120 SM01130 CSE15_06120 CSE15_06135 SM01059 Chloramphenicol acetyltransferase CSE15_06140 SM00028 Tetratricopeptide repeats CSE15_06210 SM00871 Bacterial transcription activator, effector binding domain CSE15_06225 SM01005 Alanine racemase, C-terminal domain CSE15_06230 SM00829 Enoylreductase CSE15_06240 SM00612 CSE15_06240 CSE15_06260 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). CSE15_06280 SM00257 Lysin motif CSE15_06280 SM00644 CSE15_06280 CSE15_06305 SM01022 CSE15_06305 CSE15_06330 SM00382 ATPases associated with a variety of cellular activities CSE15_06355 SM00829 Enoylreductase CSE15_06365 SM00861 Transketolase, pyrimidine binding domain CSE15_06370 SM01059 Chloramphenicol acetyltransferase CSE15_06410 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. CSE15_06435 SM00382 ATPases associated with a variety of cellular activities CSE15_06455 SM00922 Mandelate racemase / muconate lactonizing enzyme, C-terminal domain CSE15_06465 SM00382 ATPases associated with a variety of cellular activities CSE15_06500 SM00342 helix_turn_helix, arabinose operon control protein CSE15_06525 SM00359 Putative RNA-binding Domain in PseudoUridine synthase and Archaeosine transglycosylase CSE15_06535 SM00028 Tetratricopeptide repeats CSE15_06550 SM00347 helix_turn_helix multiple antibiotic resistance protein CSE15_06580 SM00530 Helix-turn-helix XRE-family like proteins CSE15_06585 SM00448 cheY-homologous receiver domain CSE15_06585 SM00862 Transcriptional regulatory protein, C terminal CSE15_06590 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain CSE15_06590 SM00387 Histidine kinase-like ATPases CSE15_06590 SM00388 His Kinase A (phosphoacceptor) domain CSE15_06610 SM00116 Domain in cystathionine beta-synthase and other proteins. CSE15_06610 SM00924 MgtE intracellular N domain CSE15_06630 SM00422 helix_turn_helix, mercury resistance CSE15_06645 SM00347 helix_turn_helix multiple antibiotic resistance protein CSE15_06655 SM00052 Putative diguanylate phosphodiesterase CSE15_06655 SM00267 diguanylate cyclase CSE15_06720 SM00091 PAS domain CSE15_06720 SM00387 Histidine kinase-like ATPases CSE15_06720 SM00388 His Kinase A (phosphoacceptor) domain CSE15_06755 SM01007 Class II Aldolase and Adducin N-terminal domain CSE15_06775 SM00347 helix_turn_helix multiple antibiotic resistance protein CSE15_06790 SM00382 ATPases associated with a variety of cellular activities CSE15_06790 SM01086 C-terminal, D2-small domain, of ClpB protein CSE15_06865 SM00354 helix_turn _helix lactose operon repressor CSE15_06870 SM01061 CAT RNA binding domain CSE15_06900 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). CSE15_06900 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain CSE15_06925 SM00091 PAS domain CSE15_06925 SM00387 Histidine kinase-like ATPases CSE15_06925 SM00388 His Kinase A (phosphoacceptor) domain CSE15_06950 SM00260 Two component signalling adaptor domain CSE15_06950 SM00448 cheY-homologous receiver domain CSE15_06960 SM00342 helix_turn_helix, arabinose operon control protein CSE15_06985 SM00257 Lysin motif CSE15_07000 SM00052 Putative diguanylate phosphodiesterase CSE15_07105 SM00852 Probable molybdopterin binding domain CSE15_07140 SM00382 ATPases associated with a variety of cellular activities CSE15_07150 SM00420 helix_turn_helix, Deoxyribose operon repressor CSE15_07150 SM01134 CSE15_07150 CSE15_07175 SM00382 ATPases associated with a variety of cellular activities CSE15_07195 SM00966 SpoVT / AbrB like domain CSE15_07200 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) CSE15_07200 SM00091 PAS domain CSE15_07200 SM00387 Histidine kinase-like ATPases CSE15_07200 SM00388 His Kinase A (phosphoacceptor) domain CSE15_07220 SM00849 Metallo-beta-lactamase superfamily CSE15_07255 SM00861 Transketolase, pyrimidine binding domain CSE15_07335 SM00838 Elongation factor G C-terminus CSE15_07355 SM00670 Large family of predicted nucleotide-binding domains CSE15_07380 SM00878 Biotin carboxylase C-terminal domain CSE15_07430 SM00116 Domain in cystathionine beta-synthase and other proteins. CSE15_07505 SM00717 SANT SWI3, ADA2, N-CoR and TFIIIB'' DNA-binding domains CSE15_07540 SM00740 CSE15_07540 CSE15_07550 SM00740 CSE15_07550 CSE15_07605 SM00842 Cell division protein FtsA CSE15_07610 SM00864 Tubulin/FtsZ family, GTPase domain CSE15_07610 SM00865 Tubulin/FtsZ family, C-terminal domain CSE15_07640 SM00858 CSE15_07640 CSE15_07665 SM00382 ATPases associated with a variety of cellular activities CSE15_07695 SM00363 S4 RNA-binding domain CSE15_07720 SM00363 S4 RNA-binding domain CSE15_07745 SM01097 Carbamoyl-phosphate synthase small chain, CPSase domain CSE15_07750 SM00851 MGS-like domain CSE15_07750 SM01096 Carbamoyl-phosphate synthetase large chain, oligomerisation domain CSE15_07750 SM01209 CSE15_07750 CSE15_07765 SM00934 Orotidine 5'-phosphate decarboxylase / HUMPS family CSE15_07820 SM00831 Cation transporter/ATPase, N-terminus CSE15_07835 SM00072 Guanylate kinase homologues. CSE15_07840 SM01409 CSE15_07840 CSE15_07850 SM00487 DEAD-like helicases superfamily CSE15_07850 SM00490 helicase superfamily c-terminal domain CSE15_07875 SM00331 Sigma factor PP2C-like phosphatases CSE15_07875 SM00332 Serine/threonine phosphatases, family 2C, catalytic domain CSE15_07880 SM00220 Serine/Threonine protein kinases, catalytic domain CSE15_07880 SM00740 CSE15_07880 CSE15_07895 SM00983 Thiamin pyrophosphokinase, vitamin B1 binding domain CSE15_07915 SM01120 CSE15_07915 CSE15_07915 SM01121 CSE15_07915 CSE15_07930 SM00487 DEAD-like helicases superfamily CSE15_07930 SM00490 helicase superfamily c-terminal domain CSE15_07945 SM00827 Acyl transferase domain in polyketide synthase (PKS) enzymes. CSE15_07950 SM00822 CSE15_07950 CSE15_07960 SM00358 Double-stranded RNA binding motif CSE15_07960 SM00535 Ribonuclease III family CSE15_07965 SM00968 SMC proteins Flexible Hinge Domain CSE15_07970 SM00382 ATPases associated with a variety of cellular activities CSE15_07970 SM00962 SRP54-type protein, GTPase domain CSE15_07970 SM00963 SRP54-type protein, helical bundle domain CSE15_07985 SM00382 ATPases associated with a variety of cellular activities CSE15_07985 SM00962 SRP54-type protein, GTPase domain CSE15_07985 SM00963 SRP54-type protein, helical bundle domain CSE15_08045 SM00881 CoA binding domain CSE15_08055 SM00436 Bacterial DNA topoisomeraes I ATP-binding domain CSE15_08055 SM00437 Bacterial DNA topoisomerase I DNA-binding domain CSE15_08055 SM00493 CSE15_08055 CSE15_08075 SM00382 ATPases associated with a variety of cellular activities CSE15_08075 SM01086 C-terminal, D2-small domain, of ClpB protein CSE15_08115 SM00382 ATPases associated with a variety of cellular activities CSE15_08165 SM00448 cheY-homologous receiver domain CSE15_08210 SM00448 cheY-homologous receiver domain CSE15_08215 SM00073 Histidine Phosphotransfer domain CSE15_08215 SM00260 Two component signalling adaptor domain CSE15_08215 SM00387 Histidine kinase-like ATPases CSE15_08215 SM01231 CSE15_08215 CSE15_08220 SM00260 Two component signalling adaptor domain CSE15_08280 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. CSE15_08295 SM01067 Cellulose binding domain CSE15_08305 SM00633 Glycosyl hydrolase family 10 CSE15_08325 SM00316 Ribosomal protein S1-like RNA-binding domain CSE15_08325 SM00322 K homology RNA-binding domain CSE15_08360 SM00904 Riboflavin kinase CSE15_08365 SM01387 CSE15_08365 CSE15_08370 SM00316 Ribosomal protein S1-like RNA-binding domain CSE15_08370 SM00322 K homology RNA-binding domain CSE15_08405 SM00859 Semialdehyde dehydrogenase, NAD binding domain CSE15_08415 SM01130 CSE15_08415 CSE15_08420 SM00849 Metallo-beta-lactamase superfamily CSE15_08435 SM00382 ATPases associated with a variety of cellular activities CSE15_08435 SM00843 CSE15_08435 CSE15_08440 SM00345 helix_turn_helix gluconate operon transcriptional repressor CSE15_08440 SM00866 CSE15_08440 CSE15_08465 SM00347 helix_turn_helix multiple antibiotic resistance protein CSE15_08500 SM00852 Probable molybdopterin binding domain CSE15_08505 SM00382 ATPases associated with a variety of cellular activities CSE15_08510 SM00322 K homology RNA-binding domain CSE15_08510 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. CSE15_08530 SM00829 Enoylreductase CSE15_08540 SM00729 Elongator protein 3, MiaB family, Radical SAM CSE15_08555 SM00533 DNA-binding domain of DNA mismatch repair MUTS family CSE15_08555 SM00534 ATPase domain of DNA mismatch repair MUTS family CSE15_08580 SM01058 CarD-like/TRCF domain CSE15_08590 SM00028 Tetratricopeptide repeats CSE15_08675 SM00646 CSE15_08675 CSE15_08680 SM00382 ATPases associated with a variety of cellular activities CSE15_08695 SM00422 helix_turn_helix, mercury resistance CSE15_08700 SM01230 CSE15_08700 CSE15_08715 SM00860 SMI1 / KNR4 family CSE15_08765 SM00014 Acid phosphatase homologues CSE15_08810 SM00559 Ku70 and Ku80 are 70kDa and 80kDa subunits of the Lupus Ku autoantigen CSE15_08890 SM00020 Trypsin-like serine protease CSE15_08925 SM00257 Lysin motif CSE15_08930 SM00857 Resolvase, N terminal domain CSE15_08940 SM00861 Transketolase, pyrimidine binding domain CSE15_09030 SM01207 CSE15_09030 CSE15_09035 SM00881 CoA binding domain CSE15_09040 SM00387 Histidine kinase-like ATPases CSE15_09040 SM00433 TopoisomeraseII CSE15_09045 SM00434 DNA Topoisomerase IV CSE15_09060 SM01329 CSE15_09060 CSE15_09065 SM01266 CSE15_09065 CSE15_09070 SM00226 Low molecular weight phosphatase family CSE15_09080 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor CSE15_09175 SM00422 helix_turn_helix, mercury resistance CSE15_09190 SM01061 CAT RNA binding domain CSE15_09200 SM00387 Histidine kinase-like ATPases CSE15_09200 SM00388 His Kinase A (phosphoacceptor) domain CSE15_09205 SM00448 cheY-homologous receiver domain CSE15_09205 SM00862 Transcriptional regulatory protein, C terminal CSE15_09215 SM00606 Cellulose Binding Domain Type IV CSE15_09280 SM00345 helix_turn_helix gluconate operon transcriptional repressor CSE15_09310 SM00347 helix_turn_helix multiple antibiotic resistance protein CSE15_09345 SM00155 Phospholipase D. Active site motifs. CSE15_09355 SM00100 Cyclic nucleotide-monophosphate binding domain CSE15_09410 SM00878 Biotin carboxylase C-terminal domain CSE15_09435 SM00420 helix_turn_helix, Deoxyribose operon repressor CSE15_09435 SM01134 CSE15_09435 CSE15_09555 SM00926 Molybdopterin oxidoreductase Fe4S4 domain CSE15_09595 SM00422 helix_turn_helix, mercury resistance CSE15_09610 SM00359 Putative RNA-binding Domain in PseudoUridine synthase and Archaeosine transglycosylase CSE15_09625 SM00926 Molybdopterin oxidoreductase Fe4S4 domain CSE15_09690 SM00849 Metallo-beta-lactamase superfamily CSE15_09695 SM00871 Bacterial transcription activator, effector binding domain CSE15_09710 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor CSE15_09750 SM00257 Lysin motif CSE15_09755 SM00341 Helicase and RNase D C-terminal CSE15_09755 SM00487 DEAD-like helicases superfamily CSE15_09755 SM00490 helicase superfamily c-terminal domain CSE15_09755 SM00956 CSE15_09755 CSE15_09820 SM00861 Transketolase, pyrimidine binding domain CSE15_09825 SM00327 von Willebrand factor (vWF) type A domain CSE15_09830 SM00382 ATPases associated with a variety of cellular activities CSE15_09840 SM00257 Lysin motif CSE15_09910 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. CSE15_09910 SM00245 tail specific protease CSE15_09940 SM00014 Acid phosphatase homologues CSE15_09970 SM00091 PAS domain CSE15_09970 SM00382 ATPases associated with a variety of cellular activities CSE15_10015 SM00347 helix_turn_helix multiple antibiotic resistance protein CSE15_10120 SM00567 E-Z type HEAT repeats CSE15_10120 SM00932 Scaffold protein Nfu/NifU N terminal CSE15_10125 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. CSE15_10155 SM00357 Cold shock protein domain CSE15_10190 SM00279 Helix-hairpin-helix class 2 (Pol1 family) motifs CSE15_10190 SM00475 5'-3' exonuclease CSE15_10245 SM00491 CSE15_10245 CSE15_10255 SM00981 CSE15_10255 CSE15_10285 SM00487 DEAD-like helicases superfamily CSE15_10285 SM00490 helicase superfamily c-terminal domain CSE15_10345 SM00478 endonuclease III CSE15_10345 SM00525 CSE15_10345 CSE15_10375 SM00479 CSE15_10375 CSE15_10375 SM00491 CSE15_10375 CSE15_10415 SM00851 MGS-like domain CSE15_10465 SM00914 CSE15_10465 CSE15_10470 SM00028 Tetratricopeptide repeats CSE15_10535 SM00138 Methyltransferase, chemotaxis proteins CSE15_10540 SM00562 CSE15_10540 CSE15_10570 SM00411 bacterial (prokaryotic) histone like domain CSE15_10630 SM01240 CSE15_10630 CSE15_10635 SM00316 Ribosomal protein S1-like RNA-binding domain CSE15_10675 SM00839 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase CSE15_10695 SM00257 Lysin motif CSE15_10705 SM00487 DEAD-like helicases superfamily CSE15_10705 SM00490 helicase superfamily c-terminal domain CSE15_10730 SM00257 Lysin motif CSE15_10745 SM00091 PAS domain CSE15_10745 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain CSE15_10745 SM00387 Histidine kinase-like ATPases CSE15_10745 SM00388 His Kinase A (phosphoacceptor) domain CSE15_10750 SM00448 cheY-homologous receiver domain CSE15_10750 SM00862 Transcriptional regulatory protein, C terminal CSE15_10770 SM00363 S4 RNA-binding domain CSE15_10915 SM00387 Histidine kinase-like ATPases CSE15_10925 SM00936 Penicillin-binding protein 5, C-terminal domain CSE15_11000 SM00028 Tetratricopeptide repeats CSE15_11070 SM00849 Metallo-beta-lactamase superfamily CSE15_11115 SM00345 helix_turn_helix gluconate operon transcriptional repressor CSE15_11115 SM00866 CSE15_11115 CSE15_11155 SM01350 CSE15_11155 CSE15_11175 SM00260 Two component signalling adaptor domain CSE15_11205 SM00382 ATPases associated with a variety of cellular activities CSE15_11215 SM00062 Bacterial periplasmic substrate-binding proteins CSE15_11215 SM00079 Eukaryotic homologues of bacterial periplasmic substrate binding proteins. CSE15_11225 SM00046 Diacylglycerol kinase catalytic domain (presumed) CSE15_11240 SM00861 Transketolase, pyrimidine binding domain CSE15_11260 SM00839 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase CSE15_11270 SM00091 PAS domain CSE15_11270 SM00382 ATPases associated with a variety of cellular activities CSE15_11290 SM00448 cheY-homologous receiver domain CSE15_11295 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. CSE15_11315 SM00363 S4 RNA-binding domain CSE15_11320 SM00861 Transketolase, pyrimidine binding domain CSE15_11355 SM00878 Biotin carboxylase C-terminal domain CSE15_11400 SM00382 ATPases associated with a variety of cellular activities CSE15_11410 SM00841 Elongation factor P, C-terminal CSE15_11410 SM01185 CSE15_11410 CSE15_11450 SM00529 Helix-turn-helix diphteria tox regulatory element CSE15_11460 SM00450 Rhodanese Homology Domain CSE15_11480 SM00487 DEAD-like helicases superfamily CSE15_11480 SM00490 helicase superfamily c-terminal domain CSE15_11495 SM00530 Helix-turn-helix XRE-family like proteins CSE15_11555 SM00382 ATPases associated with a variety of cellular activities CSE15_11580 SM00849 Metallo-beta-lactamase superfamily CSE15_11605 SM00631 CSE15_11605 CSE15_11625 SM00028 Tetratricopeptide repeats CSE15_11670 SM00382 ATPases associated with a variety of cellular activities CSE15_11760 SM00382 ATPases associated with a variety of cellular activities CSE15_11775 SM00518 AP endonuclease family 2 CSE15_11780 SM00487 DEAD-like helicases superfamily CSE15_11780 SM00490 helicase superfamily c-terminal domain CSE15_11815 SM00400 zinc finger CSE15_11815 SM00493 CSE15_11815 CSE15_11830 SM00116 Domain in cystathionine beta-synthase and other proteins. CSE15_11875 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. CSE15_11925 SM00729 Elongator protein 3, MiaB family, Radical SAM CSE15_11940 SM00271 DnaJ molecular chaperone homology domain CSE15_11960 SM00729 Elongator protein 3, MiaB family, Radical SAM CSE15_11965 SM00838 Elongation factor G C-terminus CSE15_12000 SM00849 Metallo-beta-lactamase superfamily CSE15_12030 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. CSE15_12040 SM01103 CSE15_12040 CSE15_12075 SM00028 Tetratricopeptide repeats CSE15_12095 SM00345 helix_turn_helix gluconate operon transcriptional repressor CSE15_12095 SM00895 CSE15_12095 CSE15_12110 SM00861 Transketolase, pyrimidine binding domain CSE15_12175 SM00382 ATPases associated with a variety of cellular activities CSE15_12210 SM01007 Class II Aldolase and Adducin N-terminal domain CSE15_12220 SM00345 helix_turn_helix gluconate operon transcriptional repressor CSE15_12230 SM00347 helix_turn_helix multiple antibiotic resistance protein CSE15_12245 SM00934 Orotidine 5'-phosphate decarboxylase / HUMPS family CSE15_12295 SM00382 ATPases associated with a variety of cellular activities CSE15_12300 SM00062 Bacterial periplasmic substrate-binding proteins CSE15_12320 SM00829 Enoylreductase CSE15_12360 SM00382 ATPases associated with a variety of cellular activities CSE15_12480 SM00732 Likely ribonuclease with RNase H fold. CSE15_12490 SM00863 Threonyl and Alanyl tRNA synthetase second additional domain CSE15_12500 SM00382 ATPases associated with a variety of cellular activities CSE15_12505 SM00062 Bacterial periplasmic substrate-binding proteins CSE15_12505 SM00079 Eukaryotic homologues of bacterial periplasmic substrate binding proteins. CSE15_12540 SM00028 Tetratricopeptide repeats CSE15_12560 SM00382 ATPases associated with a variety of cellular activities CSE15_12585 SM00287 Bacterial SH3 domain homologues CSE15_12585 SM00646 CSE15_12585 CSE15_12595 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. CSE15_12595 SM00954 Region found in RelA / SpoT proteins CSE15_12645 SM01323 CSE15_12645 CSE15_12665 SM00382 ATPases associated with a variety of cellular activities CSE15_12670 SM00278 Helix-hairpin-helix DNA-binding motif class 1 CSE15_12705 SM00257 Lysin motif CSE15_12750 SM01317 CSE15_12750 CSE15_12845 SM00257 Lysin motif CSE15_12860 SM01004 Delta-aminolevulinic acid dehydratase CSE15_12895 SM00382 ATPases associated with a variety of cellular activities CSE15_12895 SM00464 Found in ATP-dependent protease La (LON) CSE15_12900 SM00382 ATPases associated with a variety of cellular activities CSE15_12905 SM00382 ATPases associated with a variety of cellular activities CSE15_12905 SM00994 ClpX C4-type zinc finger CSE15_12905 SM01086 C-terminal, D2-small domain, of ClpB protein CSE15_12930 SM01329 CSE15_12930 CSE15_12935 SM00917 LeuA allosteric (dimerisation) domain CSE15_13000 SM00612 CSE15_13000 CSE15_13045 SM00909 Sporulation and spore germination CSE15_13055 SM00347 helix_turn_helix multiple antibiotic resistance protein CSE15_13060 SM00421 helix_turn_helix, Lux Regulon CSE15_13115 SM00465 GIY-YIG type nucleases (URI domain) CSE15_13125 SM00813 Alpha-L-arabinofuranosidase C-terminus CSE15_13130 SM00893 Electron transfer flavoprotein domain CSE15_13135 SM00893 Electron transfer flavoprotein domain CSE15_13165 SM00463 Small MutS-related domain CSE15_13165 SM00533 DNA-binding domain of DNA mismatch repair MUTS family CSE15_13165 SM00534 ATPase domain of DNA mismatch repair MUTS family CSE15_13170 SM00278 Helix-hairpin-helix DNA-binding motif class 1 CSE15_13170 SM00481 DNA polymerase alpha chain like domain CSE15_13170 SM00483 DNA polymerase X family CSE15_13190 SM00873 B3/4 domain CSE15_13190 SM00874 tRNA synthetase B5 domain CSE15_13190 SM00896 Ferredoxin-fold anticodon binding domain CSE15_13200 SM00967 RNA 2'-O ribose methyltransferase substrate binding CSE15_13255 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) CSE15_13255 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). CSE15_13260 SM00863 Threonyl and Alanyl tRNA synthetase second additional domain CSE15_13275 SM00382 ATPases associated with a variety of cellular activities CSE15_13300 SM00846 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain CSE15_13315 SM00898 Formamidopyrimidine-DNA glycosylase N-terminal domain CSE15_13315 SM01232 CSE15_13315 CSE15_13320 SM00279 Helix-hairpin-helix class 2 (Pol1 family) motifs CSE15_13320 SM00474 3'-5' exonuclease CSE15_13320 SM00475 5'-3' exonuclease CSE15_13320 SM00482 DNA polymerase A domain CSE15_13325 SM00387 Histidine kinase-like ATPases CSE15_13325 SM00388 His Kinase A (phosphoacceptor) domain CSE15_13330 SM00448 cheY-homologous receiver domain CSE15_13330 SM00862 Transcriptional regulatory protein, C terminal CSE15_13345 SM01329 CSE15_13345 CSE15_13390 SM00919 Malic enzyme, NAD binding domain CSE15_13390 SM01274 CSE15_13390 CSE15_13395 SM00481 DNA polymerase alpha chain like domain CSE15_13425 SM00116 Domain in cystathionine beta-synthase and other proteins. CSE15_13430 SM00849 Metallo-beta-lactamase superfamily CSE15_13455 SM00852 Probable molybdopterin binding domain CSE15_13500 SM00487 DEAD-like helicases superfamily CSE15_13500 SM00490 helicase superfamily c-terminal domain CSE15_13515 SM00421 helix_turn_helix, Lux Regulon CSE15_13515 SM00448 cheY-homologous receiver domain CSE15_13525 SM00448 cheY-homologous receiver domain CSE15_13525 SM00862 Transcriptional regulatory protein, C terminal CSE15_13530 SM00387 Histidine kinase-like ATPases CSE15_13545 SM00382 ATPases associated with a variety of cellular activities CSE15_13565 SM00347 helix_turn_helix multiple antibiotic resistance protein CSE15_13595 SM00981 CSE15_13595 CSE15_13630 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. CSE15_13635 SM00363 S4 RNA-binding domain CSE15_13635 SM01390 CSE15_13635 CSE15_13665 SM00363 S4 RNA-binding domain CSE15_13680 SM00116 Domain in cystathionine beta-synthase and other proteins. CSE15_13690 SM00354 helix_turn _helix lactose operon repressor CSE15_13695 SM00830 Chorismate mutase type II CSE15_13720 SM00382 ATPases associated with a variety of cellular activities CSE15_13720 SM00843 CSE15_13720 CSE15_13760 SM00919 Malic enzyme, NAD binding domain CSE15_13760 SM01274 CSE15_13760 CSE15_13765 SM00849 Metallo-beta-lactamase superfamily CSE15_13785 SM00046 Diacylglycerol kinase catalytic domain (presumed) CSE15_13820 SM00420 helix_turn_helix, Deoxyribose operon repressor CSE15_13825 SM00363 S4 RNA-binding domain CSE15_13860 SM00450 Rhodanese Homology Domain CSE15_13890 SM00342 helix_turn_helix, arabinose operon control protein CSE15_13940 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) CSE15_13940 SM00091 PAS domain CSE15_13955 SM00382 ATPases associated with a variety of cellular activities CSE15_13965 SM00382 ATPases associated with a variety of cellular activities CSE15_13970 SM00345 helix_turn_helix gluconate operon transcriptional repressor CSE15_14050 SM00563 Phosphate acyltransferases CSE15_14065 SM00382 ATPases associated with a variety of cellular activities CSE15_14125 SM01234 CSE15_14125 CSE15_14130 SM00947 Carbonic anhydrase CSE15_14170 SM00922 Mandelate racemase / muconate lactonizing enzyme, C-terminal domain CSE15_14350 SM00530 Helix-turn-helix XRE-family like proteins CSE15_14365 SM00244 prohibitin homologues CSE15_14470 SM00257 Lysin motif CSE15_14555 SM00421 helix_turn_helix, Lux Regulon CSE15_14575 SM00530 Helix-turn-helix XRE-family like proteins CSE15_14580 SM00530 Helix-turn-helix XRE-family like proteins CSE15_14590 SM00729 Elongator protein 3, MiaB family, Radical SAM CSE15_14590 SM00876 Biotin and Thiamin Synthesis associated domain CSE15_14625 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). CSE15_14625 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain CSE15_14625 SM00319 Homologues of the ligand binding domain of Tar CSE15_14630 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). CSE15_14630 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain CSE15_14635 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). CSE15_14635 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain CSE15_14635 SM00319 Homologues of the ligand binding domain of Tar CSE15_14640 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). CSE15_14640 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain CSE15_14640 SM00319 Homologues of the ligand binding domain of Tar CSE15_14665 SM01091 Transporter associated domain CSE15_14715 SM00316 Ribosomal protein S1-like RNA-binding domain CSE15_14725 SM00344 helix_turn_helix ASNC type CSE15_14745 SM00387 Histidine kinase-like ATPases CSE15_14745 SM00388 His Kinase A (phosphoacceptor) domain CSE15_14750 SM01298 CSE15_14750 CSE15_14755 SM00479 CSE15_14755 CSE15_14780 SM00387 Histidine kinase-like ATPases CSE15_14785 SM00448 cheY-homologous receiver domain CSE15_14795 SM00382 ATPases associated with a variety of cellular activities CSE15_14860 SM00421 helix_turn_helix, Lux Regulon CSE15_14860 SM00448 cheY-homologous receiver domain CSE15_14865 SM00387 Histidine kinase-like ATPases CSE15_14890 SM00052 Putative diguanylate phosphodiesterase CSE15_14940 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. CSE15_14985 SM01002 Alanine dehydrogenase/PNT, C-terminal domain CSE15_14985 SM01003 Alanine dehydrogenase/PNT, N-terminal domain CSE15_15140 SM00729 Elongator protein 3, MiaB family, Radical SAM CSE15_15185 SM00835 Cupin CSE15_15245 SM00388 His Kinase A (phosphoacceptor) domain CSE15_15250 SM00448 cheY-homologous receiver domain CSE15_15250 SM00862 Transcriptional regulatory protein, C terminal CSE15_15300 SM00382 ATPases associated with a variety of cellular activities CSE15_15320 SM00382 ATPases associated with a variety of cellular activities CSE15_15320 SM00930 CSE15_15320 CSE15_15335 SM00493 CSE15_15335 CSE15_15390 SM00382 ATPases associated with a variety of cellular activities CSE15_15405 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. CSE15_15415 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain CSE15_15415 SM00387 Histidine kinase-like ATPases CSE15_15415 SM00388 His Kinase A (phosphoacceptor) domain CSE15_15460 SM00421 helix_turn_helix, Lux Regulon CSE15_15460 SM00448 cheY-homologous receiver domain CSE15_15465 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain CSE15_15465 SM00387 Histidine kinase-like ATPases CSE15_15530 SM01130 CSE15_15530 CSE15_15535 SM00382 ATPases associated with a variety of cellular activities CSE15_15550 SM00710 Parallel beta-helix repeats CSE15_15565 SM00354 helix_turn _helix lactose operon repressor CSE15_15575 SM00387 Histidine kinase-like ATPases CSE15_15575 SM00388 His Kinase A (phosphoacceptor) domain CSE15_15580 SM00448 cheY-homologous receiver domain CSE15_15580 SM00862 Transcriptional regulatory protein, C terminal CSE15_15585 SM00382 ATPases associated with a variety of cellular activities CSE15_15620 SM00347 helix_turn_helix multiple antibiotic resistance protein CSE15_15680 SM00382 ATPases associated with a variety of cellular activities CSE15_15710 SM00448 cheY-homologous receiver domain CSE15_15755 SM00267 diguanylate cyclase CSE15_15780 SM00316 Ribosomal protein S1-like RNA-binding domain CSE15_15780 SM00357 Cold shock protein domain CSE15_15780 SM00955 CSE15_15780 CSE15_15795 SM00966 SpoVT / AbrB like domain CSE15_15800 SM00530 Helix-turn-helix XRE-family like proteins CSE15_15805 SM00530 Helix-turn-helix XRE-family like proteins CSE15_15810 SM00530 Helix-turn-helix XRE-family like proteins CSE15_15835 SM00116 Domain in cystathionine beta-synthase and other proteins. CSE15_15835 SM00382 ATPases associated with a variety of cellular activities CSE15_15875 SM00382 ATPases associated with a variety of cellular activities CSE15_15885 SM01192 CSE15_15885 CSE15_15885 SM01193 CSE15_15885 CSE15_15905 SM00846 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain CSE15_15925 SM00382 ATPases associated with a variety of cellular activities CSE15_15930 SM00345 helix_turn_helix gluconate operon transcriptional repressor CSE15_15930 SM00895 CSE15_15930 CSE15_15950 SM00382 ATPases associated with a variety of cellular activities CSE15_16040 SM00530 Helix-turn-helix XRE-family like proteins CSE15_16070 SM00382 ATPases associated with a variety of cellular activities CSE15_16080 SM00382 ATPases associated with a variety of cellular activities CSE15_16120 SM00530 Helix-turn-helix XRE-family like proteins CSE15_16145 SM00644 CSE15_16145 CSE15_16175 SM00710 Parallel beta-helix repeats CSE15_16185 SM00047 Lysozyme subfamily 2 CSE15_16430 SM00479 CSE15_16430 CSE15_16435 SM00474 3'-5' exonuclease CSE15_16435 SM00482 DNA polymerase A domain CSE15_16480 SM00530 Helix-turn-helix XRE-family like proteins CSE15_16590 SM00947 Carbonic anhydrase CSE15_16645 SM00028 Tetratricopeptide repeats CSE15_16755 SM00345 helix_turn_helix gluconate operon transcriptional repressor CSE15_16755 SM00866 CSE15_16755 CSE15_16790 SM00382 ATPases associated with a variety of cellular activities CSE15_16795 SM00487 DEAD-like helicases superfamily CSE15_16795 SM00490 helicase superfamily c-terminal domain CSE15_16830 SM00448 cheY-homologous receiver domain CSE15_16830 SM00862 Transcriptional regulatory protein, C terminal CSE15_16835 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain CSE15_16835 SM00387 Histidine kinase-like ATPases CSE15_16835 SM00388 His Kinase A (phosphoacceptor) domain CSE15_16865 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. CSE15_16875 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. CSE15_16875 SM00245 tail specific protease CSE15_16895 SM00382 ATPases associated with a variety of cellular activities CSE15_16940 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). CSE15_16940 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain CSE15_17020 SM00487 DEAD-like helicases superfamily CSE15_17020 SM00490 helicase superfamily c-terminal domain CSE15_17030 SM00421 helix_turn_helix, Lux Regulon CSE15_17030 SM00448 cheY-homologous receiver domain CSE15_17035 SM00387 Histidine kinase-like ATPases CSE15_17080 SM00984 UDP binding domain CSE15_17105 SM00646 CSE15_17105 CSE15_17110 SM00646 CSE15_17110 CSE15_17160 SM00382 ATPases associated with a variety of cellular activities CSE15_17195 SM00047 Lysozyme subfamily 2 CSE15_17195 SM00287 Bacterial SH3 domain homologues CSE15_17220 SM00342 helix_turn_helix, arabinose operon control protein CSE15_17220 SM00448 cheY-homologous receiver domain CSE15_17250 SM00354 helix_turn _helix lactose operon repressor CSE15_17315 SM00854 Bacterial capsule synthesis protein PGA_cap CSE15_17345 SM00354 helix_turn _helix lactose operon repressor CSE15_17360 SM00382 ATPases associated with a variety of cellular activities CSE15_17375 SM00903 Flavin reductase like domain CSE15_17395 SM00344 helix_turn_helix ASNC type CSE15_17410 SM00984 UDP binding domain CSE15_17425 SM00487 DEAD-like helicases superfamily CSE15_17425 SM00490 helicase superfamily c-terminal domain CSE15_17430 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) CSE15_17430 SM00091 PAS domain CSE15_17460 SM00028 Tetratricopeptide repeats CSE15_17485 SM00347 helix_turn_helix multiple antibiotic resistance protein CSE15_17495 SM00014 Acid phosphatase homologues CSE15_17505 SM00062 Bacterial periplasmic substrate-binding proteins CSE15_17505 SM00079 Eukaryotic homologues of bacterial periplasmic substrate binding proteins. CSE15_17515 SM00382 ATPases associated with a variety of cellular activities CSE15_17530 SM00938 Nitrogen regulatory protein P-II CSE15_17555 SM00382 ATPases associated with a variety of cellular activities CSE15_17585 SM00833 Cobalamin synthesis protein cobW C-terminal domain CSE15_17595 SM00729 Elongator protein 3, MiaB family, Radical SAM CSE15_17615 SM00327 von Willebrand factor (vWF) type A domain CSE15_17620 SM00327 von Willebrand factor (vWF) type A domain CSE15_17655 SM00382 ATPases associated with a variety of cellular activities CSE15_17715 SM00226 Low molecular weight phosphatase family CSE15_17750 SM00937 CSE15_17750 CSE15_17765 SM00919 Malic enzyme, NAD binding domain CSE15_17765 SM01274 CSE15_17765 CSE15_17780 SM00357 Cold shock protein domain CSE15_17780 SM00382 ATPases associated with a variety of cellular activities CSE15_17780 SM00959 Rho termination factor, N-terminal domain CSE15_17805 SM00448 cheY-homologous receiver domain CSE15_17860 SM00155 Phospholipase D. Active site motifs. CSE15_17885 SM00382 ATPases associated with a variety of cellular activities CSE15_17890 SM00155 Phospholipase D. Active site motifs. CSE15_17905 SM00836 DALR anticodon binding domain CSE15_17905 SM01016 Arginyl tRNA synthetase N terminal dom CSE15_17990 SM00062 Bacterial periplasmic substrate-binding proteins CSE15_18000 SM00382 ATPases associated with a variety of cellular activities CSE15_18010 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. CSE15_18035 SM00028 Tetratricopeptide repeats CSE15_18130 SM00344 helix_turn_helix ASNC type CSE15_18200 SM00858 CSE15_18200 CSE15_18260 SM00986 Uracil DNA glycosylase superfamily CSE15_18260 SM00987 UreE urease accessory protein, C-terminal domain CSE15_18280 SM00530 Helix-turn-helix XRE-family like proteins CSE15_18290 SM00640 Glycosyl hydrolases family 32 CSE15_18300 SM01061 CAT RNA binding domain CSE15_18380 SM00342 helix_turn_helix, arabinose operon control protein CSE15_18455 SM00359 Putative RNA-binding Domain in PseudoUridine synthase and Archaeosine transglycosylase CSE15_18465 SM00382 ATPases associated with a variety of cellular activities CSE15_18475 SM00062 Bacterial periplasmic substrate-binding proteins CSE15_18475 SM00079 Eukaryotic homologues of bacterial periplasmic substrate binding proteins. CSE15_18485 SM00954 Region found in RelA / SpoT proteins CSE15_18495 SM00382 ATPases associated with a variety of cellular activities CSE15_18505 SM00710 Parallel beta-helix repeats CSE15_18560 SM00839 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase CSE15_18580 SM00656 CSE15_18580 CSE15_18585 SM00382 ATPases associated with a variety of cellular activities CSE15_18590 SM00382 ATPases associated with a variety of cellular activities CSE15_18605 SM00382 ATPases associated with a variety of cellular activities CSE15_18625 SM00382 ATPases associated with a variety of cellular activities CSE15_18640 SM00725 NEAr Transporter domain CSE15_18645 SM00725 NEAr Transporter domain CSE15_18650 SM00725 NEAr Transporter domain CSE15_18745 SM00870 CSE15_18745 CSE15_18750 SM00530 Helix-turn-helix XRE-family like proteins CSE15_18755 SM00530 Helix-turn-helix XRE-family like proteins CSE15_18830 SM01061 CAT RNA binding domain CSE15_18840 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). CSE15_18850 SM00382 ATPases associated with a variety of cellular activities CSE15_18900 SM00347 helix_turn_helix multiple antibiotic resistance protein CSE15_18900 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor CSE15_18905 SM00941 Pyrimidine nucleoside phosphorylase C-terminal domain CSE15_18915 SM01133 CSE15_18915 CSE15_18950 SM00421 helix_turn_helix, Lux Regulon CSE15_18960 SM00422 helix_turn_helix, mercury resistance CSE15_18970 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) CSE15_18970 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). CSE15_19040 SM00354 helix_turn _helix lactose operon repressor CSE15_19085 SM00382 ATPases associated with a variety of cellular activities CSE15_19135 SM00382 ATPases associated with a variety of cellular activities CSE15_19145 SM00028 Tetratricopeptide repeats CSE15_19150 SM01061 CAT RNA binding domain CSE15_19190 SM00530 Helix-turn-helix XRE-family like proteins CSE15_19205 SM00354 helix_turn _helix lactose operon repressor CSE15_19275 SM00345 helix_turn_helix gluconate operon transcriptional repressor CSE15_19275 SM00866 CSE15_19275 CSE15_19320 SM00849 Metallo-beta-lactamase superfamily CSE15_19365 SM00382 ATPases associated with a variety of cellular activities CSE15_19385 SM00382 ATPases associated with a variety of cellular activities CSE15_19395 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. CSE15_19400 SM00849 Metallo-beta-lactamase superfamily CSE15_19415 SM00091 PAS domain CSE15_19415 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain CSE15_19415 SM00387 Histidine kinase-like ATPases CSE15_19415 SM00388 His Kinase A (phosphoacceptor) domain CSE15_19420 SM00448 cheY-homologous receiver domain CSE15_19420 SM00862 Transcriptional regulatory protein, C terminal CSE15_19460 SM00788 Adenylosuccinate synthetase CSE15_19480 SM00382 ATPases associated with a variety of cellular activities CSE15_19505 SM00342 helix_turn_helix, arabinose operon control protein CSE15_19535 SM00267 diguanylate cyclase CSE15_19545 SM01131 CSE15_19545 CSE15_19565 SM01060 CSE15_19565 CSE15_19590 SM00382 ATPases associated with a variety of cellular activities CSE15_19640 SM00470 ParB-like nuclease domain CSE15_19655 SM00470 ParB-like nuclease domain CSE15_19665 SM01228 CSE15_19665 CSE15_19675 SM00393 Putative single-stranded nucleic acids-binding domain CSE15_19675 SM01245 CSE15_19675