locus-tag class description EQK04_00015 PF10764 Inhibitor of sigma-G Gin EQK04_00020 PF10112 5-bromo-4-chloroindolyl phosphate hydrolysis protein EQK04_00025 PF05816 Toxic anion resistance protein (TelA) EQK04_00030 PF03711 Orn/Lys/Arg decarboxylase, C-terminal domain EQK04_00030 PF01276 Orn/Lys/Arg decarboxylase, major domain EQK04_00035 PF02223 Thymidylate kinase EQK04_00040 PF06153 Cyclic-di-AMP receptor EQK04_00045 PF03885 Protein of unknown function (DUF327) EQK04_00050 PF09115 DNA polymerase III, delta subunit, C terminal EQK04_00055 PF04468 PSP1 C-terminal conserved region EQK04_00060 PF06156 Initiation control protein YabA EQK04_00065 PF05175 Methyltransferase small domain EQK04_00070 PF01541 GIY-YIG catalytic domain EQK04_00075 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases EQK04_00080 PF18277 AbrB C-terminal domain EQK04_00080 PF04014 Antidote-toxin recognition MazE, bacterial antitoxin EQK04_00090 PF09334 tRNA synthetases class I (M) EQK04_00090 PF08264 Anticodon-binding domain of tRNA EQK04_00090 PF01588 Putative tRNA binding domain EQK04_00095 PF01026 TatD related DNase EQK04_00100 PF07501 G5 domain EQK04_00100 PF03990 G5-linked-Ubiquitin-like domain EQK04_00100 PF06725 3D domain EQK04_00105 PF13331 Domain of unknown function (DUF4093) EQK04_00105 PF13662 Toprim domain EQK04_00110 PF00398 Ribosomal RNA adenine dimethylase EQK04_00115 PF05582 YabG peptidase U57 EQK04_00120 PF06257 Biofilm formation stimulator VEG EQK04_00125 PF00269 Small, acid-soluble spore proteins, alpha/beta type EQK04_00130 PF00288 GHMP kinases N terminal domain EQK04_00130 PF08544 GHMP kinases C terminal EQK04_00135 PF00156 Phosphoribosyl transferase domain EQK04_00135 PF09182 Bacterial purine repressor, N-terminal EQK04_00140 PF01042 Endoribonuclease L-PSP EQK04_00145 PF04026 SpoVG EQK04_00150 PF00483 Nucleotidyl transferase EQK04_00150 PF00132 Bacterial transferase hexapeptide (six repeats) EQK04_00155 PF14572 Phosphoribosyl synthetase-associated domain EQK04_00155 PF13793 N-terminal domain of ribose phosphate pyrophosphokinase EQK04_00160 PF01386 Ribosomal L25p family EQK04_00160 PF14693 Ribosomal protein TL5, C-terminal domain EQK04_00165 PF01195 Peptidyl-tRNA hydrolase EQK04_00170 PF10955 Protein of unknown function (DUF2757) EQK04_00175 PF00271 Helicase conserved C-terminal domain EQK04_00175 PF03461 TRCF domain EQK04_00175 PF17757 UvrB interaction domain EQK04_00175 PF02559 CarD-like/TRCF domain EQK04_00175 PF00270 DEAD/DEAH box helicase EQK04_00180 PF15714 Stage V sporulation protein T C-terminal, transcription factor EQK04_00180 PF04014 Antidote-toxin recognition MazE, bacterial antitoxin EQK04_00185 PF01943 Polysaccharide biosynthesis protein EQK04_00185 PF14667 Polysaccharide biosynthesis C-terminal domain EQK04_00190 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases EQK04_00190 PF03819 MazG nucleotide pyrophosphohydrolase domain EQK04_00195 PF01479 S4 domain EQK04_00200 PF07873 YabP family EQK04_00205 PF09578 Spore cortex protein YabQ (Spore_YabQ) EQK04_00210 PF04977 Septum formation initiator EQK04_00215 PF00575 S1 RNA binding domain EQK04_00230 PF07228 Stage II sporulation protein E (SpoIIE) EQK04_00235 PF00092 von Willebrand factor type A domain EQK04_00240 PF00069 Protein kinase domain EQK04_00245 PF09179 TilS substrate binding domain EQK04_00245 PF11734 TilS substrate C-terminal domain EQK04_00245 PF01171 PP-loop family EQK04_00255 PF01434 Peptidase family M41 EQK04_00255 PF17862 AAA+ lid domain EQK04_00255 PF00004 ATPase family associated with various cellular activities (AAA) EQK04_00255 PF06480 FtsH Extracellular EQK04_00260 PF03309 Type III pantothenate kinase EQK04_00265 PF01430 Hsp33 protein EQK04_00270 PF13145 PPIC-type PPIASE domain EQK04_00275 PF00291 Pyridoxal-phosphate dependent enzyme EQK04_00280 PF04715 Anthranilate synthase component I, N terminal region EQK04_00280 PF00425 chorismate binding enzyme EQK04_00285 PF00117 Glutamine amidotransferase class-I EQK04_00290 PF01063 Amino-transferase class IV EQK04_00295 PF00809 Pterin binding enzyme EQK04_00300 PF02152 Dihydroneopterin aldolase EQK04_00305 PF01288 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK) EQK04_00310 PF01381 Helix-turn-helix EQK04_00315 PF01207 Dihydrouridine synthase (Dus) EQK04_00320 PF01336 OB-fold nucleic acid binding domain EQK04_00320 PF00152 tRNA synthetases class II (D, K and N) EQK04_00400 PF17727 CtsR C-terminal dimerization domain EQK04_00400 PF05848 CtsR N-terminal HTH domain EQK04_00405 PF02151 UvrB/uvrC motif EQK04_00410 PF00217 ATP:guanido phosphotransferase, C-terminal catalytic domain EQK04_00415 PF02861 Clp amino terminal domain, pathogenicity island component EQK04_00415 PF17871 AAA lid domain EQK04_00415 PF07724 AAA domain (Cdc48 subfamily) EQK04_00415 PF00004 ATPase family associated with various cellular activities (AAA) EQK04_00415 PF10431 C-terminal, D2-small domain, of ClpB protein EQK04_00420 PF18073 Rubredoxin metal binding domain EQK04_00425 PF10635 DisA bacterial checkpoint controller linker region EQK04_00425 PF02457 DisA bacterial checkpoint controller nucleotide-binding EQK04_00435 PF01128 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase EQK04_00440 PF02542 YgbB family EQK04_00445 PF00749 tRNA synthetases class I (E and Q), catalytic domain EQK04_00450 PF06426 Serine acetyltransferase, N-terminal EQK04_00450 PF00132 Bacterial transferase hexapeptide (six repeats) EQK04_00455 PF01406 tRNA synthetases class I (C) catalytic domain EQK04_00455 PF09190 DALR domain EQK04_00460 PF00636 Ribonuclease III domain EQK04_00465 PF08032 RNA 2'-O ribose methyltransferase substrate binding EQK04_00465 PF00588 SpoU rRNA Methylase family EQK04_00470 PF05991 YacP-like NYN domain EQK04_00475 PF04542 Sigma-70 region 2 EQK04_00475 PF08281 Sigma-70, region 4 EQK04_00480 PF00471 Ribosomal protein L33 EQK04_00485 PF00584 SecE/Sec61-gamma subunits of protein translocation complex EQK04_00490 PF02357 Transcription termination factor nusG EQK04_00490 PF00467 KOW motif EQK04_00495 PF03946 Ribosomal protein L11, N-terminal domain EQK04_00495 PF00298 Ribosomal protein L11, RNA binding domain EQK04_00500 PF00687 Ribosomal protein L1p/L10e family EQK04_00505 PF00466 Ribosomal protein L10 EQK04_00510 PF16320 Ribosomal protein L7/L12 dimerisation domain EQK04_00510 PF00542 Ribosomal protein L7/L12 C-terminal domain EQK04_00515 PF05175 Methyltransferase small domain EQK04_00520 PF04565 RNA polymerase Rpb2, domain 3 EQK04_00520 PF10385 RNA polymerase beta subunit external 1 domain EQK04_00520 PF04563 RNA polymerase beta subunit EQK04_00520 PF04560 RNA polymerase Rpb2, domain 7 EQK04_00520 PF04561 RNA polymerase Rpb2, domain 2 EQK04_00520 PF00562 RNA polymerase Rpb2, domain 6 EQK04_00525 PF04983 RNA polymerase Rpb1, domain 3 EQK04_00525 PF04998 RNA polymerase Rpb1, domain 5 EQK04_00525 PF05000 RNA polymerase Rpb1, domain 4 EQK04_00525 PF00623 RNA polymerase Rpb1, domain 2 EQK04_00525 PF04997 RNA polymerase Rpb1, domain 1 EQK04_00530 PF01248 Ribosomal protein L7Ae/L30e/S12e/Gadd45 family EQK04_00535 PF00164 Ribosomal protein S12/S23 EQK04_00540 PF00177 Ribosomal protein S7p/S5e EQK04_00545 PF14492 Elongation Factor G, domain II EQK04_00545 PF00679 Elongation factor G C-terminus EQK04_00545 PF03144 Elongation factor Tu domain 2 EQK04_00545 PF00009 Elongation factor Tu GTP binding domain EQK04_00545 PF03764 Elongation factor G, domain IV EQK04_00550 PF03143 Elongation factor Tu C-terminal domain EQK04_00550 PF03144 Elongation factor Tu domain 2 EQK04_00550 PF00009 Elongation factor Tu GTP binding domain EQK04_00555 PF12146 Serine aminopeptidase, S33 EQK04_00560 PF00338 Ribosomal protein S10p/S20e EQK04_00565 PF00297 Ribosomal protein L3 EQK04_00570 PF00573 Ribosomal protein L4/L1 family EQK04_00575 PF00276 Ribosomal protein L23 EQK04_00580 PF03947 Ribosomal Proteins L2, C-terminal domain EQK04_00580 PF00181 Ribosomal Proteins L2, RNA binding domain EQK04_00585 PF00203 Ribosomal protein S19 EQK04_00590 PF00237 Ribosomal protein L22p/L17e EQK04_00595 PF07650 KH domain EQK04_00595 PF00189 Ribosomal protein S3, C-terminal domain EQK04_00600 PF00252 Ribosomal protein L16p/L10e EQK04_00605 PF00831 Ribosomal L29 protein EQK04_00610 PF00366 Ribosomal protein S17 EQK04_00615 PF00238 Ribosomal protein L14p/L23e EQK04_00620 PF00467 KOW motif EQK04_00620 PF17136 Ribosomal proteins 50S L24/mitochondrial 39S L24 EQK04_00625 PF00673 ribosomal L5P family C-terminus EQK04_00625 PF00281 Ribosomal protein L5 EQK04_00630 PF00253 Ribosomal protein S14p/S29e EQK04_00635 PF00410 Ribosomal protein S8 EQK04_00640 PF00347 Ribosomal protein L6 EQK04_00645 PF00861 Ribosomal L18 of archaea, bacteria, mitoch. and chloroplast EQK04_00650 PF00333 Ribosomal protein S5, N-terminal domain EQK04_00650 PF03719 Ribosomal protein S5, C-terminal domain EQK04_00655 PF00327 Ribosomal protein L30p/L7e EQK04_00660 PF00828 Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27A EQK04_00665 PF00344 SecY translocase EQK04_00670 PF05191 Adenylate kinase, active site lid EQK04_00675 PF00557 Metallopeptidase family M24 EQK04_00685 PF01176 Translation initiation factor 1A / IF-1 EQK04_00690 PF00444 Ribosomal protein L36 EQK04_00695 PF00416 Ribosomal protein S13/S18 EQK04_00700 PF00411 Ribosomal protein S11 EQK04_00705 PF01193 RNA polymerase Rpb3/Rpb11 dimerisation domain EQK04_00705 PF03118 Bacterial RNA polymerase, alpha chain C terminal domain EQK04_00705 PF01000 RNA polymerase Rpb3/RpoA insert domain EQK04_00710 PF01196 Ribosomal protein L17 EQK04_00715 PF00005 ABC transporter EQK04_00720 PF00005 ABC transporter EQK04_00725 PF02361 Cobalt transport protein EQK04_00730 PF01416 tRNA pseudouridine synthase EQK04_00735 PF00572 Ribosomal protein L13 EQK04_00740 PF00380 Ribosomal protein S9/S16 EQK04_00745 PF13302 Acetyltransferase (GNAT) domain EQK04_00770 PF00005 ABC transporter EQK04_00785 PF10730 Protein of unknown function (DUF2521) EQK04_00790 PF01520 N-acetylmuramoyl-L-alanine amidase EQK04_00795 PF10609 NUBPL iron-transfer P-loop NTPase EQK04_00800 PF17898 Spore germination GerD central core domain EQK04_00805 PF14089 KinB-signalling pathway activation in sporulation EQK04_00810 PF01522 Polysaccharide deacetylase EQK04_00840 PF00669 Bacterial flagellin N-terminal helical region EQK04_00840 PF00700 Bacterial flagellin C-terminal helical region EQK04_00845 PF01740 STAS domain EQK04_00845 PF00916 Sulfate permease family EQK04_00850 PF01758 Sodium Bile acid symporter family EQK04_00855 PF07075 Protein of unknown function (DUF1343) EQK04_00860 PF01915 Glycosyl hydrolase family 3 C-terminal domain EQK04_00860 PF00933 Glycosyl hydrolase family 3 N terminal domain EQK04_00865 PF00144 Beta-lactamase EQK04_00870 PF02378 Phosphotransferase system, EIIC EQK04_00870 PF00367 phosphotransferase system, EIIB EQK04_00875 PF01380 SIS domain EQK04_00875 PF01418 Helix-turn-helix domain, rpiR family EQK04_00880 PF13580 SIS domain EQK04_00910 PF00491 Arginase family EQK04_00915 PF04542 Sigma-70 region 2 EQK04_00915 PF08281 Sigma-70, region 4 EQK04_00920 PF13490 Putative zinc-finger EQK04_00925 PF02457 DisA bacterial checkpoint controller nucleotide-binding EQK04_00930 PF07949 YbbR-like protein EQK04_00935 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III EQK04_00935 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II EQK04_00935 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain EQK04_00935 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I EQK04_00940 PF01380 SIS domain EQK04_00960 PF13732 Domain of unknown function (DUF4162) EQK04_00960 PF00005 ABC transporter EQK04_00970 PF00005 ABC transporter EQK04_00975 PF00005 ABC transporter EQK04_00975 PF12704 MacB-like periplasmic core domain EQK04_00975 PF02687 FtsX-like permease family EQK04_00980 PF10400 Virulence activator alpha C-term EQK04_00980 PF03551 Transcriptional regulator PadR-like family EQK04_00995 PF04055 Radical SAM superfamily EQK04_00995 PF13186 Iron-sulfur cluster-binding domain EQK04_01000 PF02517 CPBP intramembrane metalloprotease EQK04_01005 PF00005 ABC transporter EQK04_01020 PF13905 Thioredoxin-like EQK04_01030 PF04235 Protein of unknown function (DUF418) EQK04_01040 PF00005 ABC transporter EQK04_01050 PF01381 Helix-turn-helix EQK04_01060 PF00561 alpha/beta hydrolase fold EQK04_01065 PF12833 Helix-turn-helix domain EQK04_01080 PF00005 ABC transporter EQK04_01095 PF00324 Amino acid permease EQK04_01100 PF03009 Glycerophosphoryl diester phosphodiesterase family EQK04_01105 PF07690 Major Facilitator Superfamily EQK04_01115 PF03190 Protein of unknown function, DUF255 EQK04_01120 PF00109 Beta-ketoacyl synthase, N-terminal domain EQK04_01120 PF02801 Beta-ketoacyl synthase, C-terminal domain EQK04_01150 PF02583 Metal-sensitive transcriptional repressor EQK04_01155 PF13686 DsrE/DsrF/DrsH-like family EQK04_01165 PF01206 Sulfurtransferase TusA EQK04_01165 PF00581 Rhodanese-like domain EQK04_01170 PF00581 Rhodanese-like domain EQK04_01170 PF00753 Metallo-beta-lactamase superfamily EQK04_01175 PF01206 Sulfurtransferase TusA EQK04_01180 PF01925 Sulfite exporter TauE/SafE EQK04_01190 PF03129 Anticodon binding domain EQK04_01190 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) EQK04_01190 PF09180 Prolyl-tRNA synthetase, C-terminal EQK04_01195 PF07690 Major Facilitator Superfamily EQK04_01210 PF01047 MarR family EQK04_01220 PF04463 Protein of unknown function (DUF523) EQK04_01235 PF00248 Aldo/keto reductase family EQK04_01240 PF00465 Iron-containing alcohol dehydrogenase EQK04_01250 PF13520 Amino acid permease EQK04_01260 PF03123 CAT RNA binding domain EQK04_01260 PF00874 PRD domain EQK04_01265 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 EQK04_01265 PF00367 phosphotransferase system, EIIB EQK04_01265 PF02378 Phosphotransferase system, EIIC EQK04_01270 PF00232 Glycosyl hydrolase family 1 EQK04_01285 PF08279 HTH domain EQK04_01285 PF05043 Mga helix-turn-helix domain EQK04_01285 PF00874 PRD domain EQK04_01285 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 EQK04_01290 PF00480 ROK family EQK04_01295 PF01074 Glycosyl hydrolases family 38 N-terminal domain EQK04_01295 PF07748 Glycosyl hydrolases family 38 C-terminal domain EQK04_01295 PF09261 Alpha mannosidase middle domain EQK04_01305 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit EQK04_01315 PF17936 Bacterial Ig domain EQK04_01315 PF00082 Subtilase family EQK04_01330 PF00324 Amino acid permease EQK04_01335 PF02574 Homocysteine S-methyltransferase EQK04_01340 PF02588 Uncharacterised 5xTM membrane BCR, YitT family COG1284 EQK04_01340 PF10035 Uncharacterized protein conserved in bacteria (DUF2179) EQK04_01365 PF07690 Major Facilitator Superfamily EQK04_01370 PF00583 Acetyltransferase (GNAT) family EQK04_01385 PF00082 Subtilase family EQK04_01390 PF01425 Amidase EQK04_01395 PF00440 Bacterial regulatory proteins, tetR family EQK04_01400 PF07883 Cupin domain EQK04_01405 PF01047 MarR family EQK04_01410 PF13193 AMP-binding enzyme C-terminal domain EQK04_01410 PF00501 AMP-binding enzyme EQK04_01415 PF13520 Amino acid permease EQK04_01425 PF00561 alpha/beta hydrolase fold EQK04_01430 PF01235 Sodium:alanine symporter family EQK04_01435 PF04960 Glutaminase EQK04_01440 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase EQK04_01445 PF08664 YcbB domain EQK04_01445 PF00072 Response regulator receiver domain EQK04_01450 PF05225 helix-turn-helix, Psq domain EQK04_01450 PF02810 SEC-C motif EQK04_01455 PF11611 Domain of unknown function (DUF4352) EQK04_01455 PF17118 Domain of unknown function (DUF5105) EQK04_01460 PF00248 Aldo/keto reductase family EQK04_01465 PF14501 GHKL domain EQK04_01470 PF04397 LytTr DNA-binding domain EQK04_01470 PF00072 Response regulator receiver domain EQK04_01475 PF00005 ABC transporter EQK04_01480 PF12679 ABC-2 family transporter protein EQK04_01495 PF17118 Domain of unknown function (DUF5105) EQK04_01495 PF11611 Domain of unknown function (DUF4352) EQK04_01500 PF07486 Cell Wall Hydrolase EQK04_01515 PF00296 Luciferase-like monooxygenase EQK04_01520 PF02342 TerD domain EQK04_01525 PF02342 TerD domain EQK04_01530 PF02342 TerD domain EQK04_01535 PF03741 Integral membrane protein TerC family EQK04_01560 PF14266 Putative component of 'biosynthetic module' EQK04_01565 PF05816 Toxic anion resistance protein (TelA) EQK04_01570 PF00571 CBS domain EQK04_01570 PF00005 ABC transporter EQK04_01575 PF00528 Binding-protein-dependent transport system inner membrane component EQK04_01580 PF04069 Substrate binding domain of ABC-type glycine betaine transport system EQK04_01595 PF07687 Peptidase dimerisation domain EQK04_01595 PF01546 Peptidase family M20/M25/M40 EQK04_01600 PF03606 C4-dicarboxylate anaerobic carrier EQK04_01605 PF00056 lactate/malate dehydrogenase, NAD binding domain EQK04_01605 PF02866 lactate/malate dehydrogenase, alpha/beta C-terminal domain EQK04_01610 PF02652 L-lactate permease EQK04_01615 PF00356 Bacterial regulatory proteins, lacI family EQK04_01620 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family EQK04_01625 PF05116 Sucrose-6F-phosphate phosphohydrolase EQK04_01630 PF02894 Oxidoreductase family, C-terminal alpha/beta domain EQK04_01630 PF01408 Oxidoreductase family, NAD-binding Rossmann fold EQK04_01635 PF07690 Major Facilitator Superfamily EQK04_01640 PF01810 LysE type translocator EQK04_01650 PF10852 Protein of unknown function (DUF2651) EQK04_01655 PF08892 YqcI/YcgG family EQK04_01660 PF00324 Amino acid permease EQK04_01665 PF09347 Domain of unknown function (DUF1989) EQK04_01670 PF02540 NAD synthase EQK04_01680 PF00171 Aldehyde dehydrogenase family EQK04_01685 PF01487 Type I 3-dehydroquinase EQK04_01690 PF00205 Thiamine pyrophosphate enzyme, central domain EQK04_01690 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain EQK04_01690 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain EQK04_01700 PF02515 CoA-transferase family III EQK04_01705 PF07690 Major Facilitator Superfamily EQK04_01715 PF09339 IclR helix-turn-helix domain EQK04_01715 PF01614 Bacterial transcriptional regulator EQK04_01720 PF01202 Shikimate kinase EQK04_01725 PF08241 Methyltransferase domain EQK04_01730 PF03466 LysR substrate binding domain EQK04_01730 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family EQK04_01735 PF00795 Carbon-nitrogen hydrolase EQK04_01740 PF05448 Acetyl xylan esterase (AXE1) EQK04_01750 PF10127 RNA repair pathway DNA polymerase beta family EQK04_01755 PF01619 Proline dehydrogenase EQK04_01760 PF00171 Aldehyde dehydrogenase family EQK04_01765 PF17853 GGDEF-like domain EQK04_01765 PF13556 PucR C-terminal helix-turn-helix domain EQK04_01770 PF02040 Arsenical pump membrane protein EQK04_01775 PF00528 Binding-protein-dependent transport system inner membrane component EQK04_01780 PF00497 Bacterial extracellular solute-binding proteins, family 3 EQK04_01785 PF10925 Protein of unknown function (DUF2680) EQK04_01790 PF12706 Beta-lactamase superfamily domain EQK04_01795 PF01037 Lrp/AsnC ligand binding domain EQK04_01800 PF02522 Aminoglycoside 3-N-acetyltransferase EQK04_01805 PF11033 Competence protein J (ComJ) EQK04_01810 PF17202 Single cache domain 3 EQK04_01810 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain EQK04_01810 PF00672 HAMP domain EQK04_01815 PF14040 Deoxyribonuclease NucA/NucB EQK04_01825 PF01968 Hydantoinase/oxoprolinase EQK04_01825 PF05378 Hydantoinase/oxoprolinase N-terminal region EQK04_01840 PF00005 ABC transporter EQK04_01840 PF08402 TOBE domain EQK04_01845 PF00528 Binding-protein-dependent transport system inner membrane component EQK04_01850 PF00528 Binding-protein-dependent transport system inner membrane component EQK04_01855 PF00668 Condensation domain EQK04_01855 PF00550 Phosphopantetheine attachment site EQK04_01855 PF13193 AMP-binding enzyme C-terminal domain EQK04_01855 PF00501 AMP-binding enzyme EQK04_01860 PF00668 Condensation domain EQK04_01860 PF13193 AMP-binding enzyme C-terminal domain EQK04_01860 PF00501 AMP-binding enzyme EQK04_01860 PF00550 Phosphopantetheine attachment site EQK04_01865 PF00550 Phosphopantetheine attachment site EQK04_01865 PF00668 Condensation domain EQK04_01865 PF13193 AMP-binding enzyme C-terminal domain EQK04_01865 PF00975 Thioesterase domain EQK04_01865 PF00501 AMP-binding enzyme EQK04_01870 PF00668 Condensation domain EQK04_01870 PF00501 AMP-binding enzyme EQK04_01870 PF00550 Phosphopantetheine attachment site EQK04_01870 PF13193 AMP-binding enzyme C-terminal domain EQK04_01875 PF00550 Phosphopantetheine attachment site EQK04_01875 PF00501 AMP-binding enzyme EQK04_01875 PF00668 Condensation domain EQK04_01875 PF13193 AMP-binding enzyme C-terminal domain EQK04_01880 PF00975 Thioesterase domain EQK04_01885 PF00892 EamA-like transporter family EQK04_01890 PF00392 Bacterial regulatory proteins, gntR family EQK04_01890 PF00155 Aminotransferase class I and II EQK04_01895 PF01648 4'-phosphopantetheinyl transferase superfamily EQK04_01900 PF06445 GyrI-like small molecule binding domain EQK04_01900 PF12833 Helix-turn-helix domain EQK04_01915 PF00005 ABC transporter EQK04_01920 PF00528 Binding-protein-dependent transport system inner membrane component EQK04_01925 PF00497 Bacterial extracellular solute-binding proteins, family 3 EQK04_01930 PF01738 Dienelactone hydrolase family EQK04_01935 PF00324 Amino acid permease EQK04_01940 PF00854 POT family EQK04_01945 PF12708 Pectate lyase superfamily protein EQK04_01945 PF13229 Right handed beta helix region EQK04_01950 PF00296 Luciferase-like monooxygenase EQK04_01955 PF00583 Acetyltransferase (GNAT) family EQK04_01960 PF00497 Bacterial extracellular solute-binding proteins, family 3 EQK04_01965 PF00528 Binding-protein-dependent transport system inner membrane component EQK04_01970 PF00005 ABC transporter EQK04_01975 PF07687 Peptidase dimerisation domain EQK04_01975 PF01546 Peptidase family M20/M25/M40 EQK04_01980 PF03972 MmgE/PrpD family EQK04_01990 PF00486 Transcriptional regulatory protein, C terminal EQK04_01990 PF00072 Response regulator receiver domain EQK04_01995 PF00672 HAMP domain EQK04_01995 PF00512 His Kinase A (phospho-acceptor) domain EQK04_01995 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase EQK04_02000 PF01740 STAS domain EQK04_02000 PF14361 RsbT co-antagonist protein rsbRD N-terminal domain EQK04_02005 PF13840 ACT domain EQK04_02005 PF00696 Amino acid kinase family EQK04_02010 PF07690 Major Facilitator Superfamily EQK04_02015 PF00440 Bacterial regulatory proteins, tetR family EQK04_02025 PF01022 Bacterial regulatory protein, arsR family EQK04_02035 PF03466 LysR substrate binding domain EQK04_02035 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family EQK04_02040 PF00392 Bacterial regulatory proteins, gntR family EQK04_02040 PF00155 Aminotransferase class I and II EQK04_02045 PF00202 Aminotransferase class-III EQK04_02050 PF13520 Amino acid permease EQK04_02055 PF00171 Aldehyde dehydrogenase family EQK04_02060 PF02525 Flavodoxin-like fold EQK04_02065 PF07987 Domain of unkown function (DUF1775) EQK04_02070 PF04234 CopC domain EQK04_02070 PF05425 Copper resistance protein D EQK04_02070 PF13115 YtkA-like EQK04_02075 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit EQK04_02075 PF02378 Phosphotransferase system, EIIC EQK04_02080 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 EQK04_02085 PF01232 Mannitol dehydrogenase Rossmann domain EQK04_02085 PF08125 Mannitol dehydrogenase C-terminal domain EQK04_02090 PF02743 Cache domain EQK04_02090 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain EQK04_02090 PF00672 HAMP domain EQK04_02125 PF12681 Glyoxalase-like domain EQK04_02130 PF05901 Excalibur calcium-binding domain EQK04_02140 PF03746 LamB/YcsF family EQK04_02145 PF01566 Natural resistance-associated macrophage protein EQK04_02150 PF07286 Protein of unknown function (DUF1445) EQK04_02155 PF02682 Carboxyltransferase domain, subdomain C and D EQK04_02160 PF02626 Carboxyltransferase domain, subdomain A and B EQK04_02165 PF09339 IclR helix-turn-helix domain EQK04_02165 PF01614 Bacterial transcriptional regulator EQK04_02170 PF02525 Flavodoxin-like fold EQK04_02175 PF13472 GDSL-like Lipase/Acylhydrolase family EQK04_02185 PF00874 PRD domain EQK04_02185 PF08279 HTH domain EQK04_02185 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit EQK04_02185 PF05043 Mga helix-turn-helix domain EQK04_02185 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 EQK04_02190 PF13649 Methyltransferase domain EQK04_02200 PF16242 Pyridoxamine 5'-phosphate oxidase like EQK04_02220 PF12823 Domain of unknown function (DUF3817) EQK04_02225 PF00392 Bacterial regulatory proteins, gntR family EQK04_02225 PF07729 FCD domain EQK04_02230 PF12833 Helix-turn-helix domain EQK04_02230 PF02311 AraC-like ligand binding domain EQK04_02235 PF00892 EamA-like transporter family EQK04_02240 PF00180 Isocitrate/isopropylmalate dehydrogenase EQK04_02245 PF01131 DNA topoisomerase EQK04_02245 PF01751 Toprim domain EQK04_02255 PF00990 Diguanylate cyclase, GGDEF domain EQK04_02260 PF10096 Uncharacterized protein conserved in bacteria (DUF2334) EQK04_02270 PF03170 Bacterial cellulose synthase subunit EQK04_02275 PF13520 Amino acid permease EQK04_02280 PF00205 Thiamine pyrophosphate enzyme, central domain EQK04_02280 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain EQK04_02280 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain EQK04_02285 PF04740 LXG domain of WXG superfamily EQK04_02285 PF14410 HNH/ENDO VII superfamily nuclease with conserved GHE residues EQK04_02285 PF14449 Pre-toxin TG EQK04_02315 PF13302 Acetyltransferase (GNAT) domain EQK04_02320 PF01566 Natural resistance-associated macrophage protein EQK04_02325 PF04226 Transglycosylase associated protein EQK04_02330 PF12787 EcsC protein family EQK04_02335 PF03480 Bacterial extracellular solute-binding protein, family 7 EQK04_02340 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase EQK04_02340 PF17203 Single cache domain 3 EQK04_02340 PF14689 Sensor_kinase_SpoOB-type, alpha-helical domain EQK04_02345 PF08279 HTH domain EQK04_02345 PF00072 Response regulator receiver domain EQK04_02350 PF00375 Sodium:dicarboxylate symporter family EQK04_02355 PF01594 AI-2E family transporter EQK04_02360 PF00375 Sodium:dicarboxylate symporter family EQK04_02365 PF00005 ABC transporter EQK04_02380 PF13040 Fur-regulated basic protein B EQK04_02385 PF00085 Thioredoxin EQK04_02390 PF01820 D-ala D-ala ligase N-terminus EQK04_02390 PF07478 D-ala D-ala ligase C-terminus EQK04_02395 PF02875 Mur ligase family, glutamate ligase domain EQK04_02395 PF08245 Mur ligase middle domain EQK04_02395 PF01225 Mur ligase family, catalytic domain EQK04_02400 PF12146 Serine aminopeptidase, S33 EQK04_02410 PF00271 Helicase conserved C-terminal domain EQK04_02410 PF00270 DEAD/DEAH box helicase EQK04_02415 PF03703 Bacterial PH domain EQK04_02420 PF03703 Bacterial PH domain EQK04_02425 PF01694 Rhomboid family EQK04_02430 PF01648 4'-phosphopantetheinyl transferase superfamily EQK04_02440 PF00842 Alanine racemase, C-terminal domain EQK04_02440 PF01168 Alanine racemase, N-terminal domain EQK04_02445 PF01402 Ribbon-helix-helix protein, copG family EQK04_02450 PF02452 PemK-like, MazF-like toxin of type II toxin-antitoxin system EQK04_02455 PF08678 Rsbr N terminal EQK04_02455 PF01740 STAS domain EQK04_02460 PF01740 STAS domain EQK04_02465 PF13581 Histidine kinase-like ATPase domain EQK04_02470 PF08673 Phosphoserine phosphatase RsbU, N-terminal domain EQK04_02470 PF07228 Stage II sporulation protein E (SpoIIE) EQK04_02475 PF01740 STAS domain EQK04_02480 PF13581 Histidine kinase-like ATPase domain EQK04_02485 PF04542 Sigma-70 region 2 EQK04_02485 PF04539 Sigma-70 region 3 EQK04_02485 PF04545 Sigma-70, region 4 EQK04_02490 PF07228 Stage II sporulation protein E (SpoIIE) EQK04_02495 PF09371 Tex-like protein N-terminal domain EQK04_02495 PF17674 HHH domain EQK04_02495 PF00575 S1 RNA binding domain EQK04_02495 PF16921 Tex protein YqgF-like domain EQK04_02505 PF17283 SprT-like zinc ribbon domain EQK04_02505 PF10263 SprT-like family EQK04_02510 PF00676 Dehydrogenase E1 component EQK04_02515 PF02779 Transketolase, pyrimidine binding domain EQK04_02515 PF02780 Transketolase, C-terminal domain EQK04_02520 PF00364 Biotin-requiring enzyme EQK04_02520 PF02817 e3 binding domain EQK04_02520 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) EQK04_02525 PF07992 Pyridine nucleotide-disulphide oxidoreductase EQK04_02525 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain EQK04_02530 PF00158 Sigma-54 interaction domain EQK04_02530 PF01590 GAF domain EQK04_02530 PF02954 Bacterial regulatory protein, Fis family EQK04_02575 PF00313 'Cold-shock' DNA-binding domain EQK04_02580 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 EQK04_02580 PF00367 phosphotransferase system, EIIB EQK04_02580 PF02378 Phosphotransferase system, EIIC EQK04_02585 PF04794 YdjC-like protein EQK04_02590 PF03123 CAT RNA binding domain EQK04_02590 PF00874 PRD domain EQK04_02595 PF00107 Zinc-binding dehydrogenase EQK04_02595 PF08240 Alcohol dehydrogenase GroES-like domain EQK04_02600 PF13411 MerR HTH family regulatory protein EQK04_02605 PF00722 Glycosyl hydrolases family 16 EQK04_02615 PF00440 Bacterial regulatory proteins, tetR family EQK04_02620 PF07690 Major Facilitator Superfamily EQK04_02635 PF00106 short chain dehydrogenase EQK04_02645 PF17763 Glutaminase/Asparaginase C-terminal domain EQK04_02645 PF00710 Asparaginase, N-terminal EQK04_02650 PF12697 Alpha/beta hydrolase family EQK04_02660 PF16925 Tetracyclin repressor-like, C-terminal domain EQK04_02660 PF00440 Bacterial regulatory proteins, tetR family EQK04_02665 PF07690 Major Facilitator Superfamily EQK04_02670 PF01757 Acyltransferase family EQK04_02675 PF03176 MMPL family EQK04_02680 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase EQK04_02680 PF07730 Histidine kinase EQK04_02685 PF00072 Response regulator receiver domain EQK04_02685 PF00196 Bacterial regulatory proteins, luxR family EQK04_02715 PF00583 Acetyltransferase (GNAT) family EQK04_02720 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily EQK04_02730 PF00440 Bacterial regulatory proteins, tetR family EQK04_02735 PF01872 RibD C-terminal domain EQK04_02740 PF01047 MarR family EQK04_02745 PF00881 Nitroreductase family EQK04_02760 PF07883 Cupin domain EQK04_02760 PF01381 Helix-turn-helix EQK04_02765 PF01810 LysE type translocator EQK04_02770 PF00583 Acetyltransferase (GNAT) family EQK04_02785 PF01596 O-methyltransferase EQK04_02795 PF03591 AzlC protein EQK04_02800 PF00892 EamA-like transporter family EQK04_02810 PF00375 Sodium:dicarboxylate symporter family EQK04_02850 PF02769 AIR synthase related protein, C-terminal domain EQK04_02850 PF00586 AIR synthase related protein, N-terminal domain EQK04_02855 PF02367 Threonylcarbamoyl adenosine biosynthesis protein TsaE EQK04_02860 PF00814 Glycoprotease family EQK04_02865 PF00583 Acetyltransferase (GNAT) family EQK04_02870 PF00814 Glycoprotease family EQK04_02875 PF12848 ABC transporter EQK04_02875 PF16326 ABC transporter C-terminal domain EQK04_02875 PF00005 ABC transporter EQK04_02880 PF01967 MoaC family EQK04_02885 PF02629 CoA binding domain EQK04_02885 PF06971 Putative DNA-binding protein N-terminus EQK04_02890 PF02416 mttA/Hcf106 family EQK04_02895 PF00902 Sec-independent protein translocase protein (TatC) EQK04_02905 PF14146 Domain of unknown function (DUF4305) EQK04_02910 PF02517 CPBP intramembrane metalloprotease EQK04_02915 PF00166 Chaperonin 10 Kd subunit EQK04_02920 PF00118 TCP-1/cpn60 chaperonin family EQK04_02925 PF01047 MarR family EQK04_02930 PF00583 Acetyltransferase (GNAT) family EQK04_02935 PF04299 Putative FMN-binding domain EQK04_02940 PF02557 D-alanyl-D-alanine carboxypeptidase EQK04_02965 PF03330 Lytic transglycolase EQK04_02970 PF07676 WD40-like Beta Propeller Repeat EQK04_02980 PF07732 Multicopper oxidase EQK04_02980 PF07731 Multicopper oxidase EQK04_02980 PF00394 Multicopper oxidase EQK04_02985 PF00324 Amino acid permease EQK04_02990 PF01545 Cation efflux family EQK04_02990 PF16916 Dimerisation domain of Zinc Transporter EQK04_02995 PF17863 AAA lid domain EQK04_02995 PF07726 ATPase family associated with various cellular activities (AAA) EQK04_03000 PF01882 Protein of unknown function DUF58 EQK04_03005 PF01841 Transglutaminase-like superfamily EQK04_03005 PF11992 Domain of unknown function (DUF3488) EQK04_03005 PF13559 Domain of unknown function (DUF4129) EQK04_03010 PF02540 NAD synthase EQK04_03010 PF00958 GMP synthase C terminal domain EQK04_03010 PF00117 Glutamine amidotransferase class-I EQK04_03035 PF04073 Aminoacyl-tRNA editing domain EQK04_03040 PF12833 Helix-turn-helix domain EQK04_03045 PF08502 LeuA allosteric (dimerisation) domain EQK04_03045 PF00682 HMGL-like EQK04_03055 PF12833 Helix-turn-helix domain EQK04_03080 PF04397 LytTr DNA-binding domain EQK04_03080 PF00072 Response regulator receiver domain EQK04_03085 PF13302 Acetyltransferase (GNAT) domain EQK04_03100 PF08281 Sigma-70, region 4 EQK04_03100 PF04542 Sigma-70 region 2 EQK04_03110 PF07690 Major Facilitator Superfamily EQK04_03115 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family EQK04_03115 PF03466 LysR substrate binding domain EQK04_03120 PF00860 Permease family EQK04_03125 PF10055 Uncharacterized small protein (DUF2292) EQK04_03135 PF10035 Uncharacterized protein conserved in bacteria (DUF2179) EQK04_03140 PF14044 NETI protein EQK04_03145 PF00731 AIR carboxylase EQK04_03150 PF02222 ATP-grasp domain EQK04_03150 PF17769 Phosphoribosylaminoimidazole carboxylase C-terminal domain EQK04_03155 PF00206 Lyase EQK04_03155 PF10397 Adenylosuccinate lyase C-terminus EQK04_03160 PF01259 SAICAR synthetase EQK04_03165 PF02700 Phosphoribosylformylglycinamidine (FGAM) synthase EQK04_03175 PF00586 AIR synthase related protein, N-terminal domain EQK04_03175 PF02769 AIR synthase related protein, C-terminal domain EQK04_03175 PF18072 Formylglycinamide ribonucleotide amidotransferase linker domain EQK04_03180 PF00156 Phosphoribosyl transferase domain EQK04_03185 PF02769 AIR synthase related protein, C-terminal domain EQK04_03185 PF00586 AIR synthase related protein, N-terminal domain EQK04_03190 PF00551 Formyl transferase EQK04_03195 PF02142 MGS-like domain EQK04_03195 PF01808 AICARFT/IMPCHase bienzyme EQK04_03200 PF02844 Phosphoribosylglycinamide synthetase, N domain EQK04_03200 PF02843 Phosphoribosylglycinamide synthetase, C domain EQK04_03200 PF01071 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain EQK04_03220 PF00202 Aminotransferase class-III EQK04_03225 PF01144 Coenzyme A transferase EQK04_03230 PF01144 Coenzyme A transferase EQK04_03235 PF07687 Peptidase dimerisation domain EQK04_03235 PF01546 Peptidase family M20/M25/M40 EQK04_03240 PF11127 Protein of unknown function (DUF2892) EQK04_03245 PF01979 Amidohydrolase family EQK04_03245 PF13382 Adenine deaminase C-terminal domain EQK04_03250 PF01371 Trp repressor protein EQK04_03260 PF01645 Conserved region in glutamate synthase EQK04_03275 PF01884 PcrB family EQK04_03280 PF13361 UvrD-like helicase C-terminal domain EQK04_03280 PF00580 UvrD/REP helicase N-terminal domain EQK04_03285 PF03119 NAD-dependent DNA ligase C4 zinc finger domain EQK04_03285 PF03120 NAD-dependent DNA ligase OB-fold domain EQK04_03285 PF01653 NAD-dependent DNA ligase adenylation domain EQK04_03285 PF12826 Helix-hairpin-helix motif EQK04_03285 PF00533 BRCA1 C Terminus (BRCT) domain EQK04_03290 PF07537 CamS sex pheromone cAM373 precursor EQK04_03295 PF01636 Phosphotransferase enzyme family EQK04_03300 PF02308 MgtC family EQK04_03305 PF00474 Sodium:solute symporter family EQK04_03310 PF02686 Glu-tRNAGln amidotransferase C subunit EQK04_03315 PF01425 Amidase EQK04_03320 PF02934 GatB/GatE catalytic domain EQK04_03320 PF02637 GatB domain EQK04_03325 PF00440 Bacterial regulatory proteins, tetR family EQK04_03330 PF00873 AcrB/AcrD/AcrF family EQK04_03335 PF01156 Inosine-uridine preferring nucleoside hydrolase EQK04_03340 PF00781 Diacylglycerol kinase catalytic domain EQK04_03345 PF01938 TRAM domain EQK04_03345 PF05958 tRNA (Uracil-5-)-methyltransferase EQK04_03365 PF00145 C-5 cytosine-specific DNA methylase EQK04_03370 PF01207 Dihydrouridine synthase (Dus) EQK04_03385 PF02082 Transcriptional regulator EQK04_03390 PF07992 Pyridine nucleotide-disulphide oxidoreductase EQK04_03400 PF13021 Domain of unknown function (DUF3885) EQK04_03405 PF02056 Family 4 glycosyl hydrolase EQK04_03405 PF11975 Family 4 glycosyl hydrolase C-terminal domain EQK04_03410 PF01418 Helix-turn-helix domain, rpiR family EQK04_03410 PF01380 SIS domain EQK04_03415 PF07690 Major Facilitator Superfamily EQK04_03425 PF03466 LysR substrate binding domain EQK04_03425 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family EQK04_03435 PF13037 Domain of unknown function (DUF3898) EQK04_03435 PF13039 Protein of unknown function (DUF3900) EQK04_03445 PF00483 Nucleotidyl transferase EQK04_03450 PF16363 GDP-mannose 4,6 dehydratase EQK04_03455 PF03407 Nucleotide-diphospho-sugar transferase EQK04_03460 PF00535 Glycosyl transferase family 2 EQK04_03465 PF03407 Nucleotide-diphospho-sugar transferase EQK04_03470 PF07690 Major Facilitator Superfamily EQK04_03475 PF05223 NTF2-like N-terminal transpeptidase domain EQK04_03475 PF03717 Penicillin-binding Protein dimerisation domain EQK04_03475 PF00905 Penicillin binding protein transpeptidase domain EQK04_03480 PF00939 Sodium:sulfate symporter transmembrane region EQK04_03495 PF00011 Hsp20/alpha crystallin family EQK04_03510 PF13520 Amino acid permease EQK04_03515 PF13181 Tetratricopeptide repeat EQK04_03515 PF00535 Glycosyl transferase family 2 EQK04_03520 PF16326 ABC transporter C-terminal domain EQK04_03520 PF12848 ABC transporter EQK04_03520 PF00005 ABC transporter EQK04_03525 PF02649 Type I GTP cyclohydrolase folE2 EQK04_03530 PF13411 MerR HTH family regulatory protein EQK04_03535 PF07690 Major Facilitator Superfamily EQK04_03540 PF12848 ABC transporter EQK04_03540 PF00005 ABC transporter EQK04_03545 PF00271 Helicase conserved C-terminal domain EQK04_03545 PF00270 DEAD/DEAH box helicase EQK04_03550 PF16884 N-terminal domain of oxidoreductase EQK04_03550 PF00107 Zinc-binding dehydrogenase EQK04_03555 PF11486 Protein of unknown function (DUF3212) EQK04_03560 PF11181 Heat induced stress protein YflT EQK04_03570 PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase EQK04_03570 PF00925 GTP cyclohydrolase II EQK04_03575 PF03781 Sulfatase-modifying factor enzyme 1 EQK04_03585 PF01872 RibD C-terminal domain EQK04_03585 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region EQK04_03595 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase EQK04_03595 PF14689 Sensor_kinase_SpoOB-type, alpha-helical domain EQK04_03600 PF00072 Response regulator receiver domain EQK04_03600 PF08279 HTH domain EQK04_03600 PF12431 Transcriptional regulator EQK04_03605 PF03401 Tripartite tricarboxylate transporter family receptor EQK04_03610 PF03600 Citrate transporter EQK04_03620 PF05870 Phenolic acid decarboxylase (PAD) EQK04_03625 PF10400 Virulence activator alpha C-term EQK04_03625 PF03551 Transcriptional regulator PadR-like family EQK04_03630 PF02898 Nitric oxide synthase, oxygenase domain EQK04_03640 PF00708 Acylphosphatase EQK04_03645 PF03475 3-alpha domain EQK04_03645 PF03473 MOSC domain EQK04_03650 PF11121 Protein of unknown function (DUF2639) EQK04_03660 PF00557 Metallopeptidase family M24 EQK04_03665 PF02378 Phosphotransferase system, EIIC EQK04_03665 PF00367 phosphotransferase system, EIIB EQK04_03670 PF05675 Protein of unknown function (DUF817) EQK04_03680 PF14172 Domain of unknown function (DUF4309) EQK04_03685 PF00884 Sulfatase EQK04_03690 PF00282 Pyridoxal-dependent decarboxylase conserved domain EQK04_03695 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain EQK04_03695 PF00672 HAMP domain EQK04_03700 PF09350 Domain of unknown function (DUF1992) EQK04_03705 PF02378 Phosphotransferase system, EIIC EQK04_03705 PF00367 phosphotransferase system, EIIB EQK04_03710 PF16657 Maltogenic Amylase, C-terminal domain EQK04_03710 PF00128 Alpha amylase, catalytic domain EQK04_03715 PF07702 UTRA domain EQK04_03715 PF00392 Bacterial regulatory proteins, gntR family EQK04_03725 PF00149 Calcineurin-like phosphoesterase EQK04_03725 PF02872 5'-nucleotidase, C-terminal domain EQK04_03730 PF01965 DJ-1/PfpI family EQK04_03735 PF06569 Protein of unknown function (DUF1128) EQK04_03740 PF01235 Sodium:alanine symporter family EQK04_03750 PF01451 Low molecular weight phosphotyrosine protein phosphatase EQK04_03760 PF03631 Virulence factor BrkB EQK04_03765 PF13302 Acetyltransferase (GNAT) domain EQK04_03770 PF07690 Major Facilitator Superfamily EQK04_03780 PF01699 Sodium/calcium exchanger protein EQK04_03785 PF14167 YfkD-like protein EQK04_03795 PF01709 Transcriptional regulator EQK04_03805 PF00924 Mechanosensitive ion channel EQK04_03810 PF08756 YfkB-like domain EQK04_03810 PF04055 Radical SAM superfamily EQK04_03820 PF01522 Polysaccharide deacetylase EQK04_03825 PF10898 Protein of unknown function (DUF2716) EQK04_03830 PF01544 CorA-like Mg2+ transporter protein EQK04_03840 PF00730 HhH-GPD superfamily base excision DNA repair protein EQK04_03845 PF05958 tRNA (Uracil-5-)-methyltransferase EQK04_03845 PF01938 TRAM domain EQK04_03865 PF07739 TipAS antibiotic-recognition domain EQK04_03865 PF13411 MerR HTH family regulatory protein EQK04_03870 PF07690 Major Facilitator Superfamily EQK04_03925 PF00893 Small Multidrug Resistance protein EQK04_03930 PF00893 Small Multidrug Resistance protein EQK04_03935 PF00440 Bacterial regulatory proteins, tetR family EQK04_03935 PF17934 Tetracyclin repressor-like, C-terminal domain EQK04_03950 PF00657 GDSL-like Lipase/Acylhydrolase EQK04_03955 PF07992 Pyridine nucleotide-disulphide oxidoreductase EQK04_03960 PF02805 Metal binding domain of Ada EQK04_03960 PF12833 Helix-turn-helix domain EQK04_03965 PF01497 Periplasmic binding protein EQK04_03970 PF00005 ABC transporter EQK04_03970 PF00664 ABC transporter transmembrane region EQK04_03975 PF02694 Uncharacterised BCR, YnfA/UPF0060 family EQK04_03980 PF04545 Sigma-70, region 4 EQK04_03980 PF04542 Sigma-70 region 2 EQK04_03995 PF00107 Zinc-binding dehydrogenase EQK04_03995 PF08240 Alcohol dehydrogenase GroES-like domain EQK04_04000 PF12867 DinB superfamily EQK04_04010 PF01047 MarR family EQK04_04015 PF03706 Lysylphosphatidylglycerol synthase TM region EQK04_04015 PF09924 Uncharacterised conserved protein (DUF2156) EQK04_04030 PF18801 response regulator aspartate phosphatase H, N terminal EQK04_04035 PF00881 Nitroreductase family EQK04_04050 PF01370 NAD dependent epimerase/dehydratase family EQK04_04050 PF08338 Domain of unknown function (DUF1731) EQK04_04055 PF02631 RecX family EQK04_04060 PF08838 Protein of unknown function (DUF1811) EQK04_04070 PF08176 Small acid-soluble spore protein K family EQK04_04075 PF14043 WVELL protein EQK04_04080 PF00535 Glycosyl transferase family 2 EQK04_04085 PF09586 Bacterial membrane protein YfhO EQK04_04090 PF01494 FAD binding domain EQK04_04105 PF00190 Cupin EQK04_04110 PF12841 YvrJ protein family EQK04_04115 PF04545 Sigma-70, region 4 EQK04_04125 PF04307 LexA-binding, inner membrane-associated putative hydrolase EQK04_04130 PF14815 NUDIX domain EQK04_04130 PF00730 HhH-GPD superfamily base excision DNA repair protein EQK04_04145 PF04259 Small, acid-soluble spore protein, gamma-type EQK04_04155 PF04167 Protein of unknown function (DUF402) EQK04_04160 PF00005 ABC transporter EQK04_04160 PF00664 ABC transporter transmembrane region EQK04_04165 PF00005 ABC transporter EQK04_04165 PF08352 Oligopeptide/dipeptide transporter, C-terminal region EQK04_04170 PF00005 ABC transporter EQK04_04170 PF08352 Oligopeptide/dipeptide transporter, C-terminal region EQK04_04175 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle EQK04_04190 PF06081 Aromatic acid exporter family member 1 EQK04_04195 PF00202 Aminotransferase class-III EQK04_04200 PF00578 AhpC/TSA family EQK04_04205 PF01475 Ferric uptake regulator family EQK04_04210 PF11023 Zinc-ribbon containing domain EQK04_04215 PF14540 Nucleotidyltransferase-like EQK04_04215 PF18576 Helix-turn-helix domain EQK04_04350 PF00884 Sulfatase EQK04_04355 PF10502 Signal peptidase, peptidase S26 EQK04_04360 PF01053 Cys/Met metabolism PLP-dependent enzyme EQK04_04370 PF00005 ABC transporter EQK04_04375 PF09084 NMT1/THI5 like EQK04_04380 PF00528 Binding-protein-dependent transport system inner membrane component EQK04_04385 PF00296 Luciferase-like monooxygenase EQK04_04395 PF00005 ABC transporter EQK04_04430 PF08331 Domain of unknown function (DUF1730) EQK04_04435 PF12671 Putative amidase domain EQK04_04440 PF00588 SpoU rRNA Methylase family EQK04_04445 PF06798 PrkA serine protein kinase C-terminal domain EQK04_04445 PF08298 PrkA AAA domain EQK04_04450 PF04285 Protein of unknown function (DUF444) EQK04_04460 PF07690 Major Facilitator Superfamily EQK04_04465 PF03358 NADPH-dependent FMN reductase EQK04_04475 PF00313 'Cold-shock' DNA-binding domain EQK04_04485 PF00990 Diguanylate cyclase, GGDEF domain EQK04_04485 PF07694 5TMR of 5TMR-LYT EQK04_04500 PF09580 Sporulation lipoprotein YhcN/YlaJ (Spore_YhcN_YlaJ) EQK04_04510 PF07875 Coat F domain EQK04_04515 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase EQK04_04515 PF00512 His Kinase A (phospho-acceptor) domain EQK04_04515 PF00989 PAS fold EQK04_04515 PF13188 PAS domain EQK04_04515 PF13426 PAS domain EQK04_04520 PF02872 5'-nucleotidase, C-terminal domain EQK04_04520 PF00746 LPXTG cell wall anchor motif EQK04_04520 PF00565 Staphylococcal nuclease homologue EQK04_04520 PF00149 Calcineurin-like phosphoesterase EQK04_04525 PF04203 Sortase domain EQK04_04530 PF01479 S4 domain EQK04_04530 PF00849 RNA pseudouridylate synthase EQK04_04540 PF13419 Haloacid dehalogenase-like hydrolase EQK04_04545 PF00795 Carbon-nitrogen hydrolase EQK04_04545 PF00583 Acetyltransferase (GNAT) family EQK04_04565 PF13556 PucR C-terminal helix-turn-helix domain EQK04_04565 PF17853 GGDEF-like domain EQK04_04565 PF05651 Putative sugar diacid recognition EQK04_04570 PF00202 Aminotransferase class-III EQK04_04575 PF04309 Glycerol-3-phosphate responsive antiterminator EQK04_04580 PF00230 Major intrinsic protein EQK04_04585 PF00370 FGGY family of carbohydrate kinases, N-terminal domain EQK04_04585 PF02782 FGGY family of carbohydrate kinases, C-terminal domain EQK04_04590 PF01266 FAD dependent oxidoreductase EQK04_04590 PF16901 C-terminal domain of alpha-glycerophosphate oxidase EQK04_04595 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II EQK04_04595 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III EQK04_04595 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain EQK04_04595 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I EQK04_04600 PF13185 GAF domain EQK04_04600 PF07730 Histidine kinase EQK04_04605 PF00196 Bacterial regulatory proteins, luxR family EQK04_04605 PF00072 Response regulator receiver domain EQK04_04610 PF14148 YhdB-like protein EQK04_04615 PF13028 Protein of unknown function (DUF3889) EQK04_04620 PF06628 Catalase-related immune-responsive EQK04_04620 PF00199 Catalase EQK04_04625 PF02082 Transcriptional regulator EQK04_04630 PF00042 Globin EQK04_04630 PF00970 Oxidoreductase FAD-binding domain EQK04_04630 PF00175 Oxidoreductase NAD-binding domain EQK04_04635 PF04293 SpoVR like protein EQK04_04640 PF00245 Alkaline phosphatase EQK04_04645 PF00877 NlpC/P60 family EQK04_04645 PF01476 LysM domain EQK04_04650 PF13520 Amino acid permease EQK04_04655 PF17453 Sigma-M inhibitor EQK04_04660 PF13791 Sigma factor regulator C-terminal EQK04_04660 PF13800 Sigma factor regulator N-terminal EQK04_04665 PF08281 Sigma-70, region 4 EQK04_04665 PF04542 Sigma-70 region 2 EQK04_04670 PF01553 Acyltransferase EQK04_04675 PF00571 CBS domain EQK04_04675 PF03471 Transporter associated domain EQK04_04675 PF01595 Cyclin M transmembrane N-terminal domain EQK04_04680 PF13411 MerR HTH family regulatory protein EQK04_04685 PF01595 Cyclin M transmembrane N-terminal domain EQK04_04685 PF03471 Transporter associated domain EQK04_04685 PF00571 CBS domain EQK04_04695 PF02537 CrcB-like protein, Camphor Resistance (CrcB) EQK04_04700 PF02537 CrcB-like protein, Camphor Resistance (CrcB) EQK04_04705 PF03009 Glycerophosphoryl diester phosphodiesterase family EQK04_04710 PF17444 Uncharacterized YhdX-like EQK04_04715 PF00924 Mechanosensitive ion channel EQK04_04720 PF02146 Sir2 family EQK04_04725 PF01522 Polysaccharide deacetylase EQK04_04730 PF01063 Amino-transferase class IV EQK04_04740 PF00582 Universal stress protein family EQK04_04745 PF00664 ABC transporter transmembrane region EQK04_04745 PF00005 ABC transporter EQK04_04750 PF00664 ABC transporter transmembrane region EQK04_04750 PF00005 ABC transporter EQK04_04755 PF13460 NAD(P)H-binding EQK04_04760 PF00269 Small, acid-soluble spore proteins, alpha/beta type EQK04_04765 PF00005 ABC transporter EQK04_04765 PF17912 MalK OB fold domain EQK04_04765 PF03459 TOBE domain EQK04_04770 PF13556 PucR C-terminal helix-turn-helix domain EQK04_04775 PF17277 Family of unknown function (DUF5342) EQK04_04780 PF14398 YheC/D like ATP-grasp EQK04_04785 PF14398 YheC/D like ATP-grasp EQK04_04790 PF04286 Protein of unknown function (DUF445) EQK04_04795 PF06133 Control of competence regulator ComK, YlbF/YmcA EQK04_04805 PF04055 Radical SAM superfamily EQK04_04810 PF13434 L-lysine 6-monooxygenase (NADPH-requiring) EQK04_04815 PF00999 Sodium/hydrogen exchanger family EQK04_04820 PF02080 TrkA-C domain EQK04_04830 PF00378 Enoyl-CoA hydratase/isomerase EQK04_04835 PF14120 YhzD-like protein EQK04_04840 PF00149 Calcineurin-like phosphoesterase EQK04_04845 PF13514 AAA domain EQK04_04850 PF01966 HD domain EQK04_04855 PF14147 Sporulation protein YhaL EQK04_04865 PF09680 Family of unknown function EQK04_04870 PF09680 Family of unknown function EQK04_04880 PF11667 Putative zincin peptidase EQK04_04885 PF08963 Protein of unknown function (DUF1878) EQK04_04890 PF01047 MarR family EQK04_04895 PF12732 YtxH-like protein EQK04_04905 PF17099 Tryptophan transporter TrpP EQK04_04910 PF00266 Aminotransferase class-V EQK04_04915 PF01230 HIT domain EQK04_04920 PF00005 ABC transporter EQK04_04925 PF05975 Bacterial ABC transporter protein EcsB EQK04_04930 PF12787 EcsC protein family EQK04_04935 PF07687 Peptidase dimerisation domain EQK04_04935 PF01546 Peptidase family M20/M25/M40 EQK04_04950 PF03992 Antibiotic biosynthesis monooxygenase EQK04_04955 PF00912 Transglycosylase EQK04_04955 PF00905 Penicillin binding protein transpeptidase domain EQK04_04960 PF01208 Uroporphyrinogen decarboxylase (URO-D) EQK04_04975 PF17932 Tetracyclin repressor-like, C-terminal domain EQK04_04975 PF00440 Bacterial regulatory proteins, tetR family EQK04_04985 PF05343 M42 glutamyl aminopeptidase EQK04_04990 PF00375 Sodium:dicarboxylate symporter family EQK04_04995 PF14149 YhfH-like protein EQK04_05000 PF12706 Beta-lactamase superfamily domain EQK04_05005 PF03099 Biotin/lipoate A/B protein ligase family EQK04_05005 PF10437 Bacterial lipoate protein ligase C-terminus EQK04_05010 PF13193 AMP-binding enzyme C-terminal domain EQK04_05010 PF00501 AMP-binding enzyme EQK04_05020 PF01435 Peptidase family M48 EQK04_05020 PF16491 CAAX prenyl protease N-terminal, five membrane helices EQK04_05025 PF00082 Subtilase family EQK04_05025 PF05922 Peptidase inhibitor I9 EQK04_05030 PF00300 Histidine phosphatase superfamily (branch 1) EQK04_05035 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain EQK04_05040 PF01266 FAD dependent oxidoreductase EQK04_05040 PF00355 Rieske [2Fe-2S] domain EQK04_05050 PF08858 IDEAL domain EQK04_05055 PF06338 ComK protein EQK04_05060 PF14031 Putative serine dehydratase domain EQK04_05060 PF01168 Alanine racemase, N-terminal domain EQK04_05070 PF00155 Aminotransferase class I and II EQK04_05070 PF00392 Bacterial regulatory proteins, gntR family EQK04_05075 PF07690 Major Facilitator Superfamily EQK04_05080 PF01337 Barstar (barnase inhibitor) EQK04_05085 PF01032 FecCD transport family EQK04_05090 PF01032 FecCD transport family EQK04_05095 PF00005 ABC transporter EQK04_05100 PF01497 Periplasmic binding protein EQK04_05105 PF03816 Cell envelope-related transcriptional attenuator domain EQK04_05125 PF09335 SNARE associated Golgi protein EQK04_05130 PF10502 Signal peptidase, peptidase S26 EQK04_05140 PF05145 Transition state regulatory protein AbrB EQK04_05155 PF07681 DoxX EQK04_05160 PF02915 Rubrerythrin EQK04_05165 PF12705 PD-(D/E)XK nuclease superfamily EQK04_05170 PF12705 PD-(D/E)XK nuclease superfamily EQK04_05170 PF00580 UvrD/REP helicase N-terminal domain EQK04_05170 PF13361 UvrD-like helicase C-terminal domain EQK04_05175 PF12320 Type 5 capsule protein repressor C-terminal domain EQK04_05175 PF00149 Calcineurin-like phosphoesterase EQK04_05180 PF13476 AAA domain EQK04_05190 PF10676 Spore germination protein gerPA/gerPF EQK04_05195 PF10970 Spore germination protein GerPE EQK04_05205 PF10737 Spore germination protein GerPC EQK04_05210 PF10803 Spore germination GerPB EQK04_05215 PF10676 Spore germination protein gerPA/gerPF EQK04_05225 PF08757 CotH kinase protein EQK04_05240 PF01557 Fumarylacetoacetate (FAA) hydrolase family EQK04_05245 PF07457 Protein of unknown function (DUF1516) EQK04_05250 PF10949 Protein of unknown function (DUF2777) EQK04_05255 PF13537 Glutamine amidotransferase domain EQK04_05255 PF00733 Asparagine synthase EQK04_05260 PF01593 Flavin containing amine oxidoreductase EQK04_05275 PF01554 MatE EQK04_05280 PF12833 Helix-turn-helix domain EQK04_05280 PF02311 AraC-like ligand binding domain EQK04_05300 PF00202 Aminotransferase class-III EQK04_05305 PF00282 Pyridoxal-dependent decarboxylase conserved domain EQK04_05310 PF04183 IucA / IucC family EQK04_05310 PF06276 Ferric iron reductase FhuF-like transporter EQK04_05320 PF13434 L-lysine 6-monooxygenase (NADPH-requiring) EQK04_05325 PF06276 Ferric iron reductase FhuF-like transporter EQK04_05325 PF04183 IucA / IucC family EQK04_05340 PF02574 Homocysteine S-methyltransferase EQK04_05340 PF02310 B12 binding domain EQK04_05340 PF00809 Pterin binding enzyme EQK04_05340 PF02965 Vitamin B12 dependent methionine synthase, activation domain EQK04_05340 PF02607 B12 binding domain EQK04_05345 PF02219 Methylenetetrahydrofolate reductase EQK04_05345 PF02574 Homocysteine S-methyltransferase EQK04_05350 PF04461 Protein of unknown function (DUF520) EQK04_05355 PF17783 CvfB-like winged helix domain EQK04_05355 PF13509 S1 domain EQK04_05365 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain EQK04_05365 PF00672 HAMP domain EQK04_05365 PF02743 Cache domain EQK04_05370 PF02645 Uncharacterised protein, DegV family COG1307 EQK04_05375 PF10035 Uncharacterized protein conserved in bacteria (DUF2179) EQK04_05375 PF02588 Uncharacterised 5xTM membrane BCR, YitT family COG1284 EQK04_05380 PF12690 Intracellular proteinase inhibitor EQK04_05385 PF12758 Protein of unknown function (DUF3813) EQK04_05400 PF00326 Prolyl oligopeptidase family EQK04_05405 PF01883 Iron-sulfur cluster assembly protein EQK04_05410 PF01565 FAD binding domain EQK04_05415 PF07690 Major Facilitator Superfamily EQK04_05420 PF02774 Semialdehyde dehydrogenase, dimerisation domain EQK04_05420 PF01118 Semialdehyde dehydrogenase, NAD binding domain EQK04_05425 PF01960 ArgJ family EQK04_05430 PF00696 Amino acid kinase family EQK04_05435 PF00202 Aminotransferase class-III EQK04_05440 PF00117 Glutamine amidotransferase class-I EQK04_05440 PF00988 Carbamoyl-phosphate synthase small chain, CPSase domain EQK04_05445 PF02787 Carbamoyl-phosphate synthetase large chain, oligomerisation domain EQK04_05445 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain EQK04_05450 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain EQK04_05450 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain EQK04_05455 PF14168 YjzC-like protein EQK04_05460 PF07690 Major Facilitator Superfamily EQK04_05465 PF11151 Protein of unknown function (DUF2929) EQK04_05480 PF02608 ABC transporter substrate-binding protein PnrA-like EQK04_05485 PF10815 ComZ EQK04_05495 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal EQK04_05495 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III EQK04_05500 PF02801 Beta-ketoacyl synthase, C-terminal domain EQK04_05500 PF00109 Beta-ketoacyl synthase, N-terminal domain EQK04_05505 PF10026 Predicted Zn-dependent protease (DUF2268) EQK04_05510 PF08352 Oligopeptide/dipeptide transporter, C-terminal region EQK04_05510 PF00005 ABC transporter EQK04_05515 PF08352 Oligopeptide/dipeptide transporter, C-terminal region EQK04_05515 PF00005 ABC transporter EQK04_05520 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle EQK04_05525 PF00528 Binding-protein-dependent transport system inner membrane component EQK04_05530 PF00528 Binding-protein-dependent transport system inner membrane component EQK04_05530 PF12911 N-terminal TM domain of oligopeptide transport permease C EQK04_05535 PF12227 Protein of unknown function (DUF3603) EQK04_05540 PF00579 tRNA synthetases class I (W and Y) EQK04_05545 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle EQK04_05550 PF00528 Binding-protein-dependent transport system inner membrane component EQK04_05555 PF12911 N-terminal TM domain of oligopeptide transport permease C EQK04_05555 PF00528 Binding-protein-dependent transport system inner membrane component EQK04_05560 PF08352 Oligopeptide/dipeptide transporter, C-terminal region EQK04_05560 PF00005 ABC transporter EQK04_05565 PF08352 Oligopeptide/dipeptide transporter, C-terminal region EQK04_05565 PF00005 ABC transporter EQK04_05575 PF13508 Acetyltransferase (GNAT) domain EQK04_05580 PF03960 ArsC family EQK04_05585 PF03741 Integral membrane protein TerC family EQK04_05590 PF05389 Negative regulator of genetic competence (MecA) EQK04_05595 PF13091 PLD-like domain EQK04_05595 PF13396 Phospholipase_D-nuclease N-terminal EQK04_05605 PF01432 Peptidase family M3 EQK04_05605 PF08439 Oligopeptidase F EQK04_05620 PF01152 Bacterial-like globin EQK04_05625 PF01464 Transglycosylase SLT domain EQK04_05630 PF01928 CYTH domain EQK04_05640 PF04607 Region found in RelA / SpoT proteins EQK04_05645 PF01513 ATP-NAD kinase EQK04_05650 PF00849 RNA pseudouridylate synthase EQK04_05655 PF00149 Calcineurin-like phosphoesterase EQK04_05660 PF02080 TrkA-C domain EQK04_05660 PF00999 Sodium/hydrogen exchanger family EQK04_05660 PF02254 TrkA-N domain EQK04_05665 PF03070 TENA/THI-4/PQQC family EQK04_05670 PF02581 Thiamine monophosphate synthase EQK04_05675 PF01266 FAD dependent oxidoreductase EQK04_05680 PF02597 ThiS family EQK04_05685 PF05690 Thiazole biosynthesis protein ThiG EQK04_05690 PF00899 ThiF family EQK04_05695 PF08543 Phosphomethylpyrimidine kinase EQK04_05705 PF14153 Spore coat protein CotO EQK04_05710 PF10612 Spore coat protein Z EQK04_05715 PF10612 Spore coat protein Z EQK04_05720 PF07552 Spore Coat Protein X and V domain EQK04_05730 PF07552 Spore Coat Protein X and V domain EQK04_05735 PF07098 Protein of unknown function (DUF1360) EQK04_05750 PF14069 Stage VI sporulation protein F EQK04_05755 PF00580 UvrD/REP helicase N-terminal domain EQK04_05755 PF13361 UvrD-like helicase C-terminal domain EQK04_05765 PF13673 Acetyltransferase (GNAT) domain EQK04_05775 PF00756 Putative esterase EQK04_05780 PF01053 Cys/Met metabolism PLP-dependent enzyme EQK04_05785 PF01053 Cys/Met metabolism PLP-dependent enzyme EQK04_05795 PF01381 Helix-turn-helix EQK04_05810 PF03255 Acetyl co-enzyme A carboxylase carboxyltransferase alpha subunit EQK04_05825 PF18801 response regulator aspartate phosphatase H, N terminal EQK04_05825 PF13176 Tetratricopeptide repeat EQK04_05835 PF01810 LysE type translocator EQK04_05850 PF00302 Chloramphenicol acetyltransferase EQK04_05875 PF10852 Protein of unknown function (DUF2651) EQK04_05880 PF01636 Phosphotransferase enzyme family EQK04_05885 PF03466 LysR substrate binding domain EQK04_05885 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family EQK04_05890 PF01177 Asp/Glu/Hydantoin racemase EQK04_05905 PF03466 LysR substrate binding domain EQK04_05905 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family EQK04_05910 PF07690 Major Facilitator Superfamily EQK04_05915 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain EQK04_05915 PF07992 Pyridine nucleotide-disulphide oxidoreductase EQK04_05940 PF01168 Alanine racemase, N-terminal domain EQK04_05940 PF00842 Alanine racemase, C-terminal domain EQK04_05945 PF08240 Alcohol dehydrogenase GroES-like domain EQK04_05945 PF00107 Zinc-binding dehydrogenase EQK04_05950 PF00440 Bacterial regulatory proteins, tetR family EQK04_05960 PF00700 Bacterial flagellin C-terminal helical region EQK04_05960 PF00669 Bacterial flagellin N-terminal helical region EQK04_05965 PF00700 Bacterial flagellin C-terminal helical region EQK04_05965 PF00669 Bacterial flagellin N-terminal helical region EQK04_05970 PF00700 Bacterial flagellin C-terminal helical region EQK04_05970 PF00669 Bacterial flagellin N-terminal helical region EQK04_05975 PF00700 Bacterial flagellin C-terminal helical region EQK04_05975 PF00669 Bacterial flagellin N-terminal helical region EQK04_05980 PF01494 FAD binding domain EQK04_05995 PF05908 Poly-gamma-glutamate hydrolase EQK04_06000 PF06114 IrrE N-terminal-like domain EQK04_06005 PF01510 N-acetylmuramoyl-L-alanine amidase EQK04_06005 PF01476 LysM domain EQK04_06005 PF01471 Putative peptidoglycan binding domain EQK04_06010 PF14185 Antitoxin SpoIISB, type II toxin-antitoxin system EQK04_06015 PF14171 Toxin SpoIISA, type II toxin-antitoxin system EQK04_06025 PF01384 Phosphate transporter family EQK04_06030 PF01865 Protein of unknown function DUF47 EQK04_06050 PF00528 Binding-protein-dependent transport system inner membrane component EQK04_06055 PF00528 Binding-protein-dependent transport system inner membrane component EQK04_06060 PF17850 CysA C-terminal regulatory domain EQK04_06060 PF12857 TOBE-like domain EQK04_06060 PF00005 ABC transporter EQK04_06070 PF03611 PTS system sugar-specific permease component EQK04_06085 PF00107 Zinc-binding dehydrogenase EQK04_06085 PF08240 Alcohol dehydrogenase GroES-like domain EQK04_06090 PF00676 Dehydrogenase E1 component EQK04_06095 PF00364 Biotin-requiring enzyme EQK04_06095 PF02779 Transketolase, pyrimidine binding domain EQK04_06095 PF02780 Transketolase, C-terminal domain EQK04_06100 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) EQK04_06100 PF00364 Biotin-requiring enzyme EQK04_06100 PF02817 e3 binding domain EQK04_06105 PF07992 Pyridine nucleotide-disulphide oxidoreductase EQK04_06105 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain EQK04_06120 PF04198 Putative sugar-binding domain EQK04_06130 PF13520 Amino acid permease EQK04_06135 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily EQK04_06145 PF13180 PDZ domain EQK04_06150 PF14748 Pyrroline-5-carboxylate reductase dimerisation EQK04_06150 PF03807 NADP oxidoreductase coenzyme F420-dependent EQK04_06155 PF04951 D-aminopeptidase EQK04_06160 PF00528 Binding-protein-dependent transport system inner membrane component EQK04_06165 PF00528 Binding-protein-dependent transport system inner membrane component EQK04_06165 PF12911 N-terminal TM domain of oligopeptide transport permease C EQK04_06170 PF08352 Oligopeptide/dipeptide transporter, C-terminal region EQK04_06170 PF00005 ABC transporter EQK04_06175 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle EQK04_06180 PF02016 LD-carboxypeptidase N-terminal domain EQK04_06180 PF17676 LD-carboxypeptidase C-terminal domain EQK04_06185 PF13378 Enolase C-terminal domain-like EQK04_06185 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain EQK04_06190 PF00877 NlpC/P60 family EQK04_06195 PF08352 Oligopeptide/dipeptide transporter, C-terminal region EQK04_06195 PF00005 ABC transporter EQK04_06205 PF03061 Thioesterase superfamily EQK04_06210 PF03551 Transcriptional regulator PadR-like family EQK04_06225 PF13302 Acetyltransferase (GNAT) domain EQK04_06230 PF02805 Metal binding domain of Ada EQK04_06230 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain EQK04_06230 PF12833 Helix-turn-helix domain EQK04_06230 PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain EQK04_06235 PF00893 Small Multidrug Resistance protein EQK04_06240 PF00893 Small Multidrug Resistance protein EQK04_06250 PF00551 Formyl transferase EQK04_06250 PF01842 ACT domain EQK04_06255 PF01472 PUA domain EQK04_06255 PF00696 Amino acid kinase family EQK04_06260 PF00171 Aldehyde dehydrogenase family EQK04_06265 PF18801 response regulator aspartate phosphatase H, N terminal EQK04_06275 PF02566 OsmC-like protein EQK04_06280 PF01047 MarR family EQK04_06285 PF02566 OsmC-like protein EQK04_06290 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region EQK04_06295 PF08267 Cobalamin-independent synthase, N-terminal domain EQK04_06295 PF01717 Cobalamin-independent synthase, Catalytic domain EQK04_06300 PF00082 Subtilase family EQK04_06315 PF00486 Transcriptional regulatory protein, C terminal EQK04_06315 PF00072 Response regulator receiver domain EQK04_06320 PF00512 His Kinase A (phospho-acceptor) domain EQK04_06320 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase EQK04_06320 PF00672 HAMP domain EQK04_06325 PF03413 Peptidase propeptide and YPEB domain EQK04_06330 PF03413 Peptidase propeptide and YPEB domain EQK04_06340 PF03448 MgtE intracellular N domain EQK04_06340 PF00571 CBS domain EQK04_06340 PF01769 Divalent cation transporter EQK04_06350 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family EQK04_06350 PF03466 LysR substrate binding domain EQK04_06360 PF13411 MerR HTH family regulatory protein EQK04_06370 PF01047 MarR family EQK04_06375 PF00990 Diguanylate cyclase, GGDEF domain EQK04_06375 PF03707 Bacterial signalling protein N terminal repeat EQK04_06375 PF00563 EAL domain EQK04_06380 PF09335 SNARE associated Golgi protein EQK04_06385 PF03741 Integral membrane protein TerC family EQK04_06390 PF04542 Sigma-70 region 2 EQK04_06395 PF12791 Anti-sigma factor N-terminus EQK04_06400 PF00269 Small, acid-soluble spore proteins, alpha/beta type EQK04_06405 PF08876 Domain of unknown function (DUF1836) EQK04_06410 PF01435 Peptidase family M48 EQK04_06415 PF02386 Cation transport protein EQK04_06420 PF04239 Protein of unknown function (DUF421) EQK04_06430 PF01757 Acyltransferase family EQK04_06435 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase EQK04_06435 PF00989 PAS fold EQK04_06435 PF13426 PAS domain EQK04_06435 PF00512 His Kinase A (phospho-acceptor) domain EQK04_06435 PF13188 PAS domain EQK04_06440 PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain EQK04_06440 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain EQK04_06445 PF01008 Initiation factor 2 subunit family EQK04_06450 PF01636 Phosphotransferase enzyme family EQK04_06455 PF00155 Aminotransferase class I and II EQK04_06460 PF00016 Ribulose bisphosphate carboxylase large chain, catalytic domain EQK04_06460 PF02788 Ribulose bisphosphate carboxylase large chain, N-terminal domain EQK04_06470 PF00596 Class II Aldolase and Adducin N-terminal domain EQK04_06475 PF03079 ARD/ARD' family EQK04_06480 PF09388 Spo0E like sporulation regulatory protein EQK04_06485 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase EQK04_06485 PF00512 His Kinase A (phospho-acceptor) domain EQK04_06485 PF02743 Cache domain EQK04_06490 PF01047 MarR family EQK04_06495 PF00691 OmpA family EQK04_06495 PF13677 Membrane MotB of proton-channel complex MotA/MotB EQK04_06500 PF01618 MotA/TolQ/ExbB proton channel family EQK04_06505 PF10431 C-terminal, D2-small domain, of ClpB protein EQK04_06505 PF17871 AAA lid domain EQK04_06505 PF07724 AAA domain (Cdc48 subfamily) EQK04_06505 PF00004 ATPase family associated with various cellular activities (AAA) EQK04_06515 PF06508 Queuosine biosynthesis protein QueC EQK04_06520 PF01242 6-pyruvoyl tetrahydropterin synthase EQK04_06525 PF04055 Radical SAM superfamily EQK04_06530 PF14489 QueF-like protein EQK04_06545 PF09953 Uncharacterized protein conserved in bacteria (DUF2187) EQK04_06555 PF07486 Cell Wall Hydrolase EQK04_06560 PF01943 Polysaccharide biosynthesis protein EQK04_06565 PF00578 AhpC/TSA family EQK04_06575 PF00557 Metallopeptidase family M24 EQK04_06575 PF01321 Creatinase/Prolidase N-terminal domain EQK04_06580 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family EQK04_06580 PF00356 Bacterial regulatory proteins, lacI family EQK04_06585 PF00874 PRD domain EQK04_06585 PF03123 CAT RNA binding domain EQK04_06590 PF02378 Phosphotransferase system, EIIC EQK04_06590 PF00367 phosphotransferase system, EIIB EQK04_06590 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 EQK04_06595 PF00381 PTS HPr component phosphorylation site EQK04_06600 PF02896 PEP-utilising enzyme, TIM barrel domain EQK04_06600 PF05524 PEP-utilising enzyme, N-terminal EQK04_06600 PF00391 PEP-utilising enzyme, mobile domain EQK04_06605 PF11132 Transcriptional regulator protein (SplA) EQK04_06615 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain EQK04_06615 PF02743 Cache domain EQK04_06615 PF00672 HAMP domain EQK04_06620 PF00106 short chain dehydrogenase EQK04_06625 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase EQK04_06625 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase EQK04_06630 PF00188 Cysteine-rich secretory protein family EQK04_06635 PF03717 Penicillin-binding Protein dimerisation domain EQK04_06635 PF00905 Penicillin binding protein transpeptidase domain EQK04_06640 PF00989 PAS fold EQK04_06640 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase EQK04_06640 PF00512 His Kinase A (phospho-acceptor) domain EQK04_06640 PF08447 PAS fold EQK04_06645 PF00155 Aminotransferase class I and II EQK04_06650 PF16916 Dimerisation domain of Zinc Transporter EQK04_06650 PF01545 Cation efflux family EQK04_06655 PF06271 RDD family EQK04_06665 PF00072 Response regulator receiver domain EQK04_06665 PF01584 CheW-like domain EQK04_06670 PF14177 YkyB-like protein EQK04_06675 PF02311 AraC-like ligand binding domain EQK04_06675 PF12833 Helix-turn-helix domain EQK04_06680 PF00892 EamA-like transporter family EQK04_06695 PF07690 Major Facilitator Superfamily EQK04_06700 PF01476 LysM domain EQK04_06700 PF03734 L,D-transpeptidase catalytic domain EQK04_06705 PF00149 Calcineurin-like phosphoesterase EQK04_06705 PF10518 TAT (twin-arginine translocation) pathway signal sequence EQK04_06715 PF10388 EAL-domain associated signalling protein domain EQK04_06715 PF00563 EAL domain EQK04_06720 PF05067 Manganese containing catalase EQK04_06725 PF08796 Protein of unknown function (DUF1797) EQK04_06730 PF04308 Ribonuclease H-like EQK04_06735 PF14156 Antirepressor AbbA EQK04_06745 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family EQK04_06745 PF03466 LysR substrate binding domain EQK04_06755 PF00258 Flavodoxin EQK04_06765 PF00258 Flavodoxin EQK04_06770 PF14602 Hexapeptide repeat of succinyl-transferase EQK04_06770 PF00132 Bacterial transferase hexapeptide (six repeats) EQK04_06770 PF08503 Tetrahydrodipicolinate succinyltransferase N-terminal EQK04_06775 PF01546 Peptidase family M20/M25/M40 EQK04_06775 PF07687 Peptidase dimerisation domain EQK04_06780 PF03698 Uncharacterised protein family (UPF0180) EQK04_06785 PF00924 Mechanosensitive ion channel EQK04_06790 PF10417 C-terminal domain of 1-Cys peroxiredoxin EQK04_06790 PF00578 AhpC/TSA family EQK04_06795 PF00578 AhpC/TSA family EQK04_06810 PF12804 MobA-like NTP transferase domain EQK04_06815 PF00899 ThiF family EQK04_06820 PF03453 MoeA N-terminal region (domain I and II) EQK04_06820 PF00994 Probable molybdopterin binding domain EQK04_06820 PF03454 MoeA C-terminal region (domain IV) EQK04_06825 PF03205 Molybdopterin guanine dinucleotide synthesis protein B EQK04_06830 PF02391 MoaE protein EQK04_06835 PF02597 ThiS family EQK04_06850 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion EQK04_06855 PF00005 ABC transporter EQK04_06860 PF12704 MacB-like periplasmic core domain EQK04_06860 PF02687 FtsX-like permease family EQK04_06865 PF00455 DeoR C terminal sensor domain EQK04_06865 PF08220 DeoR-like helix-turn-helix domain EQK04_06870 PF00294 pfkB family carbohydrate kinase EQK04_06875 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 EQK04_06875 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit EQK04_06880 PF10502 Signal peptidase, peptidase S26 EQK04_06890 PF00005 ABC transporter EQK04_06890 PF12848 ABC transporter EQK04_06905 PF02073 Thermophilic metalloprotease (M29) EQK04_06915 PF04014 Antidote-toxin recognition MazE, bacterial antitoxin EQK04_06915 PF18277 AbrB C-terminal domain EQK04_06920 PF00989 PAS fold EQK04_06920 PF00512 His Kinase A (phospho-acceptor) domain EQK04_06920 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase EQK04_06925 PF06094 Gamma-glutamyl cyclotransferase, AIG2-like EQK04_06930 PF02254 TrkA-N domain EQK04_06930 PF02080 TrkA-C domain EQK04_06935 PF01979 Amidohydrolase family EQK04_06935 PF13382 Adenine deaminase C-terminal domain EQK04_06940 PF07521 Zn-dependent metallo-hydrolase RNA specificity domain EQK04_06940 PF00753 Metallo-beta-lactamase superfamily EQK04_06940 PF17770 Ribonuclease J C-terminal domain EQK04_06955 PF01327 Polypeptide deformylase EQK04_06970 PF00676 Dehydrogenase E1 component EQK04_06975 PF02779 Transketolase, pyrimidine binding domain EQK04_06975 PF02780 Transketolase, C-terminal domain EQK04_06980 PF02817 e3 binding domain EQK04_06980 PF00364 Biotin-requiring enzyme EQK04_06980 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) EQK04_06985 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain EQK04_06985 PF07992 Pyridine nucleotide-disulphide oxidoreductase EQK04_06995 PF13790 SR1 protein EQK04_07000 PF01276 Orn/Lys/Arg decarboxylase, major domain EQK04_07000 PF03711 Orn/Lys/Arg decarboxylase, C-terminal domain EQK04_07005 PF05256 Uncharacterised protein family (UPF0223) EQK04_07010 PF06335 Protein of unknown function (DUF1054) EQK04_07020 PF00459 Inositol monophosphatase family EQK04_07035 PF08281 Sigma-70, region 4 EQK04_07035 PF04542 Sigma-70 region 2 EQK04_07040 PF13490 Putative zinc-finger EQK04_07060 PF14036 YlaH-like protein EQK04_07065 PF09963 Uncharacterized protein conserved in bacteria (DUF2197) EQK04_07070 PF09580 Sporulation lipoprotein YhcN/YlaJ (Spore_YhcN_YlaJ) EQK04_07075 PF13638 PIN domain EQK04_07075 PF02562 PhoH-like protein EQK04_07085 PF04960 Glutaminase EQK04_07090 PF07408 Protein of unknown function (DUF1507) EQK04_07095 PF01098 Cell cycle protein EQK04_07100 PF00364 Biotin-requiring enzyme EQK04_07100 PF02785 Biotin carboxylase C-terminal domain EQK04_07100 PF02436 Conserved carboxylase domain EQK04_07100 PF00682 HMGL-like EQK04_07100 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain EQK04_07100 PF00289 Biotin carboxylase, N-terminal domain EQK04_07110 PF02628 Cytochrome oxidase assembly protein EQK04_07115 PF01040 UbiA prenyltransferase family EQK04_07120 PF02790 Cytochrome C oxidase subunit II, transmembrane domain EQK04_07120 PF00116 Cytochrome C oxidase subunit II, periplasmic domain EQK04_07120 PF00034 Cytochrome c EQK04_07125 PF00115 Cytochrome C and Quinol oxidase polypeptide I EQK04_07130 PF00510 Cytochrome c oxidase subunit III EQK04_07135 PF03626 Prokaryotic Cytochrome C oxidase subunit IV EQK04_07140 PF09678 Cytochrome c oxidase caa3 assembly factor (Caa3_CtaG) EQK04_07145 PF08868 YugN-like family EQK04_07150 PF00571 CBS domain EQK04_07155 PF14504 CAP-associated N-terminal EQK04_07155 PF00188 Cysteine-rich secretory protein family EQK04_07160 PF14071 Putative coat protein EQK04_07165 PF14003 YlbE-like protein EQK04_07175 PF06133 Control of competence regulator ComK, YlbF/YmcA EQK04_07180 PF09902 Uncharacterized protein conserved in bacteria (DUF2129) EQK04_07190 PF01467 Cytidylyltransferase-like EQK04_07195 PF07670 Nucleoside recognition EQK04_07200 PF01734 Patatin-like phospholipase EQK04_07205 PF13180 PDZ domain EQK04_07205 PF05362 Lon protease (S16) C-terminal proteolytic domain EQK04_07210 PF05636 HIGH Nucleotidyl Transferase EQK04_07215 PF02620 Large ribosomal RNA subunit accumulation protein YceD EQK04_07220 PF01783 Ribosomal L32p protein family EQK04_07230 PF00583 Acetyltransferase (GNAT) family EQK04_07235 PF02558 Ketopantoate reductase PanE/ApbA EQK04_07235 PF08546 Ketopantoate reductase PanE/ApbA C terminal EQK04_07240 PF10079 Bacillithiol biosynthesis BshC EQK04_07245 PF02381 MraZ protein, putative antitoxin-like EQK04_07250 PF01795 MraW methylase family EQK04_07270 PF03793 PASTA domain EQK04_07270 PF03717 Penicillin-binding Protein dimerisation domain EQK04_07270 PF00905 Penicillin binding protein transpeptidase domain EQK04_07275 PF02875 Mur ligase family, glutamate ligase domain EQK04_07275 PF08245 Mur ligase middle domain EQK04_07275 PF01225 Mur ligase family, catalytic domain EQK04_07280 PF00953 Glycosyl transferase family 4 EQK04_07280 PF10555 Phospho-N-acetylmuramoyl-pentapeptide-transferase signature 1 EQK04_07285 PF08245 Mur ligase middle domain EQK04_07285 PF02875 Mur ligase family, glutamate ligase domain EQK04_07290 PF01098 Cell cycle protein EQK04_07295 PF04101 Glycosyltransferase family 28 C-terminal domain EQK04_07295 PF03033 Glycosyltransferase family 28 N-terminal domain EQK04_07300 PF02873 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain EQK04_07300 PF01565 FAD binding domain EQK04_07305 PF08478 POTRA domain, FtsQ-type EQK04_07310 PF05949 Bacterial protein of unknown function (DUF881) EQK04_07315 PF05949 Bacterial protein of unknown function (DUF881) EQK04_07320 PF06947 Protein of unknown function (DUF1290) EQK04_07325 PF02491 SHS2 domain inserted in FTSA EQK04_07330 PF00091 Tubulin/FtsZ family, GTPase domain EQK04_07330 PF12327 FtsZ family, C-terminal domain EQK04_07335 PF00082 Subtilase family EQK04_07335 PF05922 Peptidase inhibitor I9 EQK04_07340 PF03419 Sporulation factor SpoIIGA EQK04_07345 PF04542 Sigma-70 region 2 EQK04_07345 PF04545 Sigma-70, region 4 EQK04_07350 PF04545 Sigma-70, region 4 EQK04_07350 PF04539 Sigma-70 region 3 EQK04_07350 PF04542 Sigma-70 region 2 EQK04_07355 PF04198 Putative sugar-binding domain EQK04_07370 PF03608 PTS system enzyme II sorbitol-specific factor EQK04_07375 PF03612 Sorbitol phosphotransferase enzyme II N-terminus EQK04_07375 PF07663 Sorbitol phosphotransferase enzyme II C-terminus EQK04_07380 PF03829 PTS system glucitol/sorbitol-specific IIA component EQK04_07385 PF00005 ABC transporter EQK04_07390 PF05239 PRC-barrel domain EQK04_07400 PF01168 Alanine racemase, N-terminal domain EQK04_07405 PF04472 Cell division protein SepF EQK04_07410 PF02325 YGGT family EQK04_07415 PF17774 Putative RNA-binding domain in YlmH EQK04_07415 PF01479 S4 domain EQK04_07420 PF05103 DivIVA protein EQK04_07425 PF00133 tRNA synthetases class I (I, L, M and V) EQK04_07425 PF08264 Anticodon-binding domain of tRNA EQK04_07430 PF01258 Prokaryotic dksA/traR C4-type zinc finger EQK04_07435 PF01252 Signal peptidase (SPase) II EQK04_07440 PF00849 RNA pseudouridylate synthase EQK04_07440 PF01479 S4 domain EQK04_07445 PF00156 Phosphoribosyl transferase domain EQK04_07450 PF00860 Permease family EQK04_07455 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain EQK04_07455 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain EQK04_07460 PF01979 Amidohydrolase family EQK04_07465 PF00117 Glutamine amidotransferase class-I EQK04_07465 PF00988 Carbamoyl-phosphate synthase small chain, CPSase domain EQK04_07470 PF02142 MGS-like domain EQK04_07470 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain EQK04_07470 PF02787 Carbamoyl-phosphate synthetase large chain, oligomerisation domain EQK04_07475 PF10418 Iron-sulfur cluster binding domain of dihydroorotate dehydrogenase B EQK04_07480 PF01180 Dihydroorotate dehydrogenase EQK04_07485 PF00215 Orotidine 5'-phosphate decarboxylase / HUMPS family EQK04_07490 PF00156 Phosphoribosyl transferase domain EQK04_07500 PF01507 Phosphoadenosine phosphosulfate reductase family EQK04_07505 PF01384 Phosphate transporter family EQK04_07510 PF14306 PUA-like domain EQK04_07510 PF01747 ATP-sulfurylase EQK04_07520 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases EQK04_07525 PF01903 CbiX EQK04_07535 PF05670 NFACT protein RNA binding domain EQK04_07540 PF00690 Cation transporter/ATPase, N-terminus EQK04_07540 PF00689 Cation transporting ATPase, C-terminus EQK04_07545 PF03755 YicC-like family, N-terminal region EQK04_07545 PF08340 Domain of unknown function (DUF1732) EQK04_07550 PF04025 Domain of unknown function (DUF370) EQK04_07555 PF00625 Guanylate kinase EQK04_07560 PF01192 RNA polymerase Rpb6 EQK04_07565 PF02441 Flavoprotein EQK04_07565 PF04127 DNA / pantothenate metabolism flavoprotein EQK04_07570 PF04851 Type III restriction enzyme, res subunit EQK04_07570 PF18319 PriA DNA helicase Cys-rich region (CRR) domain EQK04_07570 PF18074 Primosomal protein N C-terminal domain EQK04_07570 PF17764 3′ DNA-binding domain (3′BD) EQK04_07570 PF00271 Helicase conserved C-terminal domain EQK04_07575 PF01327 Polypeptide deformylase EQK04_07580 PF00551 Formyl transferase EQK04_07580 PF02911 Formyl transferase, C-terminal domain EQK04_07585 PF01189 16S rRNA methyltransferase RsmB/F EQK04_07585 PF01029 NusB family EQK04_07590 PF04055 Radical SAM superfamily EQK04_07600 PF03793 PASTA domain EQK04_07600 PF00069 Protein kinase domain EQK04_07605 PF03193 RsgA GTPase EQK04_07605 PF16745 RsgA N-terminal domain EQK04_07610 PF00834 Ribulose-phosphate 3 epimerase family EQK04_07615 PF04265 Thiamin pyrophosphokinase, vitamin B1 binding domain EQK04_07615 PF04263 Thiamin pyrophosphokinase, catalytic domain EQK04_07620 PF08183 Stage V sporulation protein family EQK04_07625 PF00830 Ribosomal L28 family EQK04_07630 PF03780 Asp23 family, cell envelope-related function EQK04_07635 PF13684 Dihydroxyacetone kinase family EQK04_07635 PF02734 DAK2 domain EQK04_07640 PF03315 Serine dehydratase beta chain EQK04_07640 PF01842 ACT domain EQK04_07645 PF03313 Serine dehydratase alpha chain EQK04_07650 PF00271 Helicase conserved C-terminal domain EQK04_07650 PF17191 RecG wedge domain EQK04_07650 PF00270 DEAD/DEAH box helicase EQK04_07660 PF02504 Fatty acid synthesis protein EQK04_07665 PF00698 Acyl transferase domain EQK04_07675 PF00550 Phosphopantetheine attachment site EQK04_07680 PF00035 Double-stranded RNA binding motif EQK04_07680 PF14622 Ribonuclease-III-like EQK04_07685 PF02463 RecF/RecN/SMC N terminal domain EQK04_07685 PF06470 SMC proteins Flexible Hinge Domain EQK04_07690 PF00448 SRP54-type protein, GTPase domain EQK04_07690 PF02881 SRP54-type protein, helical bundle domain EQK04_07695 PF04297 Putative helix-turn-helix protein, YlxM / p13 like EQK04_07700 PF02978 Signal peptide binding domain EQK04_07700 PF02881 SRP54-type protein, helical bundle domain EQK04_07700 PF00448 SRP54-type protein, GTPase domain EQK04_07705 PF00886 Ribosomal protein S16 EQK04_07715 PF11068 YlqD protein EQK04_07720 PF05239 PRC-barrel domain EQK04_07720 PF01782 RimM N-terminal domain EQK04_07725 PF01746 tRNA (Guanine-1)-methyltransferase EQK04_07730 PF01245 Ribosomal protein L19 EQK04_07735 PF01926 50S ribosome-binding GTPase EQK04_07740 PF01351 Ribonuclease HII EQK04_07750 PF01312 FlhB HrpN YscU SpaS Family EQK04_07755 PF08442 ATP-grasp domain EQK04_07755 PF00549 CoA-ligase EQK04_07760 PF00549 CoA-ligase EQK04_07760 PF02629 CoA binding domain EQK04_07765 PF02481 DNA recombination-mediator protein A EQK04_07770 PF01131 DNA topoisomerase EQK04_07770 PF01396 Topoisomerase DNA binding C4 zinc finger EQK04_07770 PF01751 Toprim domain EQK04_07775 PF01134 Glucose inhibited division protein A EQK04_07780 PF02899 Phage integrase, N-terminal SAM-like domain EQK04_07780 PF00589 Phage integrase family EQK04_07785 PF00227 Proteasome subunit EQK04_07790 PF07724 AAA domain (Cdc48 subfamily) EQK04_07790 PF10431 C-terminal, D2-small domain, of ClpB protein EQK04_07790 PF00004 ATPase family associated with various cellular activities (AAA) EQK04_07795 PF08222 CodY helix-turn-helix domain EQK04_07795 PF06018 CodY GAF-like domain EQK04_07800 PF00460 Flagella basal body rod protein EQK04_07805 PF00460 Flagella basal body rod protein EQK04_07805 PF06429 Flagellar basal body rod FlgEFG protein C-terminal EQK04_07810 PF02049 Flagellar hook-basal body complex protein FliE EQK04_07815 PF01514 Secretory protein of YscJ/FliF family EQK04_07815 PF08345 Flagellar M-ring protein C-terminal EQK04_07820 PF14841 FliG middle domain EQK04_07820 PF01706 FliG C-terminal domain EQK04_07820 PF14842 FliG N-terminal domain EQK04_07825 PF02108 Flagellar assembly protein FliH EQK04_07830 PF18269 T3SS EscN ATPase C-terminal domain EQK04_07830 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain EQK04_07830 PF02874 ATP synthase alpha/beta family, beta-barrel domain EQK04_07835 PF02050 Flagellar FliJ protein EQK04_07840 PF03448 MgtE intracellular N domain EQK04_07845 PF02120 Flagellar hook-length control protein FliK EQK04_07850 PF03963 Flagellar hook capping protein - N-terminal region EQK04_07855 PF06429 Flagellar basal body rod FlgEFG protein C-terminal EQK04_07855 PF00460 Flagella basal body rod protein EQK04_07860 PF06289 Flagellar and Swarming motility proteins EQK04_07865 PF03748 Flagellar basal body-associated protein FliL EQK04_07870 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term EQK04_07870 PF02154 Flagellar motor switch protein FliM EQK04_07875 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term EQK04_07875 PF04509 CheC-like family EQK04_07880 PF00072 Response regulator receiver domain EQK04_07885 PF04347 Flagellar biosynthesis protein, FliO EQK04_07890 PF00813 FliP family EQK04_07895 PF01313 Bacterial export proteins, family 3 EQK04_07900 PF01311 Bacterial export proteins, family 1 EQK04_07905 PF01312 FlhB HrpN YscU SpaS Family EQK04_07910 PF00771 FHIPEP family EQK04_07915 PF00448 SRP54-type protein, GTPase domain EQK04_07920 PF10609 NUBPL iron-transfer P-loop NTPase EQK04_07925 PF01339 CheB methylesterase EQK04_07925 PF00072 Response regulator receiver domain EQK04_07930 PF01627 Hpt domain EQK04_07930 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase EQK04_07930 PF02895 Signal transducing histidine kinase, homodimeric domain EQK04_07930 PF07194 P2 response regulator binding domain EQK04_07930 PF01584 CheW-like domain EQK04_07935 PF01584 CheW-like domain EQK04_07940 PF04509 CheC-like family EQK04_07945 PF03975 CheD chemotactic sensory transduction EQK04_07950 PF04545 Sigma-70, region 4 EQK04_07950 PF04539 Sigma-70 region 3 EQK04_07950 PF04542 Sigma-70 region 2 EQK04_07960 PF00318 Ribosomal protein S2 EQK04_07965 PF00889 Elongation factor TS EQK04_07970 PF00696 Amino acid kinase family EQK04_07975 PF01765 Ribosome recycling factor EQK04_07980 PF01255 Putative undecaprenyl diphosphate synthase EQK04_07990 PF02670 1-deoxy-D-xylulose 5-phosphate reductoisomerase EQK04_07990 PF13288 DXP reductoisomerase C-terminal domain EQK04_07990 PF08436 1-deoxy-D-xylulose 5-phosphate reductoisomerase C-terminal domain EQK04_07995 PF02163 Peptidase family M50 EQK04_07995 PF17820 PDZ domain EQK04_08000 PF03129 Anticodon binding domain EQK04_08000 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) EQK04_08000 PF04073 Aminoacyl-tRNA editing domain EQK04_08005 PF17657 Bacterial DNA polymerase III alpha subunit finger domain EQK04_08005 PF14579 Helix-hairpin-helix motif EQK04_08005 PF00929 Exonuclease EQK04_08005 PF02811 PHP domain EQK04_08005 PF14480 DNA polymerase III polC-type N-terminus I EQK04_08005 PF11490 DNA polymerase III polC-type N-terminus II EQK04_08005 PF07733 Bacterial DNA polymerase III alpha NTPase domain EQK04_08010 PF00942 Cellulose binding domain EQK04_08010 PF00759 Glycosyl hydrolase family 9 EQK04_08015 PF00759 Glycosyl hydrolase family 9 EQK04_08015 PF02011 Glycosyl hydrolase family 48 EQK04_08015 PF00942 Cellulose binding domain EQK04_08020 PF12791 Anti-sigma factor N-terminus EQK04_08020 PF00331 Glycosyl hydrolase family 10 EQK04_08035 PF02576 RimP N-terminal domain EQK04_08035 PF17384 RimP C-terminal SH3 domain EQK04_08040 PF00575 S1 RNA binding domain EQK04_08040 PF08529 NusA N-terminal domain EQK04_08040 PF13184 NusA-like KH domain EQK04_08045 PF04296 Protein of unknown function (DUF448) EQK04_08050 PF01248 Ribosomal protein L7Ae/L30e/S12e/Gadd45 family EQK04_08055 PF00009 Elongation factor Tu GTP binding domain EQK04_08055 PF11987 Translation-initiation factor 2 EQK04_08055 PF04760 Translation initiation factor IF-2, N-terminal region EQK04_08060 PF04456 Protein of unknown function (DUF503) EQK04_08065 PF02033 Ribosome-binding factor A EQK04_08070 PF16198 tRNA pseudouridylate synthase B C-terminal domain EQK04_08070 PF01509 TruB family pseudouridylate synthase (N terminal domain) EQK04_08075 PF06574 FAD synthetase EQK04_08075 PF01687 Riboflavin kinase EQK04_08080 PF00312 Ribosomal protein S15 EQK04_08085 PF01138 3' exoribonuclease family, domain 1 EQK04_08085 PF03725 3' exoribonuclease family, domain 2 EQK04_08085 PF00575 S1 RNA binding domain EQK04_08085 PF00013 KH domain EQK04_08085 PF03726 Polyribonucleotide nucleotidyltransferase, RNA binding domain EQK04_08090 PF01522 Polysaccharide deacetylase EQK04_08095 PF05193 Peptidase M16 inactive domain EQK04_08095 PF00675 Insulinase (Peptidase family M16) EQK04_08105 PF05239 PRC-barrel domain EQK04_08110 PF01262 Alanine dehydrogenase/PNT, C-terminal domain EQK04_08110 PF16924 Dipicolinate synthase subunit A N-terminal domain EQK04_08115 PF02441 Flavoprotein EQK04_08120 PF02774 Semialdehyde dehydrogenase, dimerisation domain EQK04_08120 PF01118 Semialdehyde dehydrogenase, NAD binding domain EQK04_08125 PF00696 Amino acid kinase family EQK04_08125 PF13840 ACT domain EQK04_08130 PF00701 Dihydrodipicolinate synthetase family EQK04_08135 PF07521 Zn-dependent metallo-hydrolase RNA specificity domain EQK04_08135 PF00753 Metallo-beta-lactamase superfamily EQK04_08135 PF17770 Ribonuclease J C-terminal domain EQK04_08140 PF00574 Clp protease EQK04_08145 PF14035 YlzJ-like protein EQK04_08150 PF17854 FtsK alpha domain EQK04_08150 PF01580 FtsK/SpoIIIE family EQK04_08150 PF09397 Ftsk gamma domain EQK04_08155 PF00392 Bacterial regulatory proteins, gntR family EQK04_08155 PF07702 UTRA domain EQK04_08160 PF07690 Major Facilitator Superfamily EQK04_08165 PF03176 MMPL family EQK04_08170 PF05193 Peptidase M16 inactive domain EQK04_08175 PF00675 Insulinase (Peptidase family M16) EQK04_08175 PF05193 Peptidase M16 inactive domain EQK04_08185 PF03176 MMPL family EQK04_08195 PF11588 Protein of unknown function (DUF3243) EQK04_08200 PF11868 Protein of unknown function (DUF3388) EQK04_08205 PF13464 Domain of unknown function (DUF4115) EQK04_08210 PF01066 CDP-alcohol phosphatidyltransferase EQK04_08215 PF18146 Damage-inducible protein CinA KH domain EQK04_08215 PF00994 Probable molybdopterin binding domain EQK04_08215 PF02464 Competence-damaged protein EQK04_08220 PF00154 recA bacterial DNA recombination protein EQK04_08225 PF00013 KH domain EQK04_08225 PF12072 Domain of unknown function (DUF3552) EQK04_08225 PF01966 HD domain EQK04_08230 PF13277 YmdB-like protein EQK04_08235 PF04232 Stage V sporulation protein S (SpoVS) EQK04_08240 PF00873 AcrB/AcrD/AcrF family EQK04_08245 PF08240 Alcohol dehydrogenase GroES-like domain EQK04_08245 PF00107 Zinc-binding dehydrogenase EQK04_08250 PF00155 Aminotransferase class I and II EQK04_08255 PF00919 Uncharacterized protein family UPF0004 EQK04_08255 PF04055 Radical SAM superfamily EQK04_08255 PF01938 TRAM domain EQK04_08260 PF06133 Control of competence regulator ComK, YlbF/YmcA EQK04_08265 PF10628 Outer spore coat protein E (CotE) EQK04_08270 PF01624 MutS domain I EQK04_08270 PF05188 MutS domain II EQK04_08270 PF05192 MutS domain III EQK04_08270 PF05190 MutS family domain IV EQK04_08270 PF00488 MutS domain V EQK04_08275 PF08676 MutL C terminal dimerisation domain EQK04_08275 PF01119 DNA mismatch repair protein, C-terminal domain EQK04_08280 PF17735 Biofilm surface layer A EQK04_08295 PF02559 CarD-like/TRCF domain EQK04_08300 PF05908 Poly-gamma-glutamate hydrolase EQK04_08305 PF18801 response regulator aspartate phosphatase H, N terminal EQK04_08310 PF00082 Subtilase family EQK04_08315 PF05908 Poly-gamma-glutamate hydrolase EQK04_08320 PF02566 OsmC-like protein EQK04_08325 PF00893 Small Multidrug Resistance protein EQK04_08330 PF00893 Small Multidrug Resistance protein EQK04_08345 PF12788 YmaF family EQK04_08355 PF17209 Hfq protein EQK04_08370 PF07972 NrdI Flavodoxin like EQK04_08375 PF08343 Ribonucleotide reductase N-terminal EQK04_08375 PF02867 Ribonucleotide reductase, barrel domain EQK04_08375 PF00317 Ribonucleotide reductase, all-alpha domain EQK04_08380 PF00268 Ribonucleotide reductase, small chain EQK04_08390 PF05036 Sporulation related domain EQK04_08390 PF01520 N-acetylmuramoyl-L-alanine amidase EQK04_08395 PF00004 ATPase family associated with various cellular activities (AAA) EQK04_08395 PF17866 AAA lid domain EQK04_08400 PF01926 50S ribosome-binding GTPase EQK04_08400 PF13167 GTP-binding GTPase N-terminal EQK04_08400 PF16360 GTP-binding GTPase Middle Region EQK04_08405 PF06838 Methionine gamma-lyase EQK04_08410 PF13411 MerR HTH family regulatory protein EQK04_08415 PF03951 Glutamine synthetase, beta-Grasp domain EQK04_08415 PF00120 Glutamine synthetase, catalytic domain EQK04_08435 PF18801 response regulator aspartate phosphatase H, N terminal EQK04_08435 PF17874 MalT-like TPR region EQK04_08455 PF04740 LXG domain of WXG superfamily EQK04_08460 PF04634 Protein of unknown function, DUF600 EQK04_08475 PF01569 PAP2 superfamily EQK04_08480 PF08818 Domain of unknown function (DU1801) EQK04_08500 PF18801 response regulator aspartate phosphatase H, N terminal EQK04_08510 PF06912 Protein of unknown function (DUF1275) EQK04_08515 PF01068 ATP dependent DNA ligase domain EQK04_08520 PF02735 Ku70/Ku80 beta-barrel domain EQK04_08525 PF09954 Uncharacterized protein conserved in bacteria (DUF2188) EQK04_08535 PF02082 Transcriptional regulator EQK04_08540 PF05368 NmrA-like family EQK04_08550 PF02754 Cysteine-rich domain EQK04_08555 PF02589 LUD domain EQK04_08555 PF13183 4Fe-4S dicluster domain EQK04_08555 PF11870 Domain of unknown function (DUF3390) EQK04_08560 PF02589 LUD domain EQK04_08575 PF04239 Protein of unknown function (DUF421) EQK04_08580 PF16295 Tetracyclin repressor-like, C-terminal domain EQK04_08580 PF00440 Bacterial regulatory proteins, tetR family EQK04_08585 PF00067 Cytochrome P450 EQK04_08585 PF00667 FAD binding domain EQK04_08585 PF00258 Flavodoxin EQK04_08585 PF00175 Oxidoreductase NAD-binding domain EQK04_08590 PF00089 Trypsin EQK04_08595 PF13231 Dolichyl-phosphate-mannose-protein mannosyltransferase EQK04_08600 PF14040 Deoxyribonuclease NucA/NucB EQK04_08605 PF01740 STAS domain EQK04_08610 PF16800 IseA DL-endopeptidase inhibitor EQK04_08620 PF01726 LexA DNA binding domain EQK04_08620 PF00717 Peptidase S24-like EQK04_08625 PF01476 LysM domain EQK04_08630 PF00239 Resolvase, N terminal domain EQK04_08635 PF05979 Bacterial protein of unknown function (DUF896) EQK04_08640 PF00456 Transketolase, thiamine diphosphate binding domain EQK04_08640 PF02780 Transketolase, C-terminal domain EQK04_08640 PF02779 Transketolase, pyrimidine binding domain EQK04_08645 PF10747 Sporulation inhibitor of replication protein SirA EQK04_08650 PF03672 Uncharacterised protein family (UPF0154) EQK04_08655 PF09388 Spo0E like sporulation regulatory protein EQK04_08660 PF02683 Cytochrome C biogenesis protein transmembrane region EQK04_08665 PF07301 Protein of unknown function (DUF1453) EQK04_08670 PF11084 Protein of unknown function (DUF2621) EQK04_08680 PF08179 Small acid-soluble spore protein P family EQK04_08690 PF00330 Aconitase family (aconitate hydratase) EQK04_08690 PF00694 Aconitase C-terminal domain EQK04_08695 PF00578 AhpC/TSA family EQK04_08700 PF13040 Fur-regulated basic protein B EQK04_08705 PF08177 Small acid-soluble spore protein N family EQK04_08715 PF03061 Thioesterase superfamily EQK04_08725 PF01521 Iron-sulphur cluster biosynthesis EQK04_08730 PF02660 Glycerol-3-phosphate acyltransferase EQK04_08735 PF13380 CoA binding domain EQK04_08740 PF00204 DNA gyrase B EQK04_08740 PF01751 Toprim domain EQK04_08740 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase EQK04_08740 PF00986 DNA gyrase B subunit, carboxyl terminus EQK04_08745 PF00521 DNA gyrase/topoisomerase IV, subunit A EQK04_08745 PF03989 DNA gyrase C-terminal domain, beta-propeller EQK04_08755 PF07690 Major Facilitator Superfamily EQK04_08760 PF00180 Isocitrate/isopropylmalate dehydrogenase EQK04_08770 PF01451 Low molecular weight phosphotyrosine protein phosphatase EQK04_08775 PF02040 Arsenical pump membrane protein EQK04_08780 PF01022 Bacterial regulatory protein, arsR family EQK04_08790 PF01323 DSBA-like thioredoxin domain EQK04_08805 PF00440 Bacterial regulatory proteins, tetR family EQK04_08810 PF02525 Flavodoxin-like fold EQK04_08815 PF01638 HxlR-like helix-turn-helix EQK04_08820 PF00291 Pyridoxal-phosphate dependent enzyme EQK04_08825 PF01042 Endoribonuclease L-PSP EQK04_08840 PF01494 FAD binding domain EQK04_08860 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region EQK04_08865 PF00934 PE family EQK04_08865 PF07859 alpha/beta hydrolase fold EQK04_08870 PF13411 MerR HTH family regulatory protein EQK04_08875 PF00232 Glycosyl hydrolase family 1 EQK04_08880 PF02378 Phosphotransferase system, EIIC EQK04_08880 PF00367 phosphotransferase system, EIIB EQK04_08880 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 EQK04_08885 PF00874 PRD domain EQK04_08885 PF03123 CAT RNA binding domain EQK04_08895 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase EQK04_08895 PF00512 His Kinase A (phospho-acceptor) domain EQK04_08900 PF00486 Transcriptional regulatory protein, C terminal EQK04_08900 PF00072 Response regulator receiver domain EQK04_08905 PF02055 Glycosyl hydrolase family 30 TIM-barrel domain EQK04_08905 PF17189 Glycosyl hydrolase family 30 beta sandwich domain EQK04_08910 PF03422 Carbohydrate binding module (family 6) EQK04_08910 PF04616 Glycosyl hydrolases family 43 EQK04_08915 PF00171 Aldehyde dehydrogenase family EQK04_08920 PF02056 Family 4 glycosyl hydrolase EQK04_08920 PF11975 Family 4 glycosyl hydrolase C-terminal domain EQK04_08925 PF00528 Binding-protein-dependent transport system inner membrane component EQK04_08930 PF00528 Binding-protein-dependent transport system inner membrane component EQK04_08935 PF01547 Bacterial extracellular solute-binding protein EQK04_08940 PF00356 Bacterial regulatory proteins, lacI family EQK04_08945 PF00834 Ribulose-phosphate 3 epimerase family EQK04_08960 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 EQK04_08995 PF14449 Pre-toxin TG EQK04_08995 PF04740 LXG domain of WXG superfamily EQK04_08995 PF14410 HNH/ENDO VII superfamily nuclease with conserved GHE residues EQK04_09000 PF01047 MarR family EQK04_09005 PF07690 Major Facilitator Superfamily EQK04_09010 PF01116 Fructose-bisphosphate aldolase class-II EQK04_09015 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 EQK04_09015 PF02378 Phosphotransferase system, EIIC EQK04_09015 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit EQK04_09020 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit EQK04_09020 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 EQK04_09025 PF00294 pfkB family carbohydrate kinase EQK04_09030 PF01380 SIS domain EQK04_09030 PF01418 Helix-turn-helix domain, rpiR family EQK04_09035 PF13091 PLD-like domain EQK04_09055 PF00171 Aldehyde dehydrogenase family EQK04_09060 PF00175 Oxidoreductase NAD-binding domain EQK04_09060 PF00258 Flavodoxin EQK04_09060 PF00667 FAD binding domain EQK04_09065 PF01077 Nitrite and sulphite reductase 4Fe-4S domain EQK04_09065 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain EQK04_09070 PF00501 AMP-binding enzyme EQK04_09070 PF16177 Acetyl-coenzyme A synthetase N-terminus EQK04_09070 PF13193 AMP-binding enzyme C-terminal domain EQK04_09075 PF01039 Carboxyl transferase domain EQK04_09080 PF00378 Enoyl-CoA hydratase/isomerase EQK04_09085 PF00682 HMGL-like EQK04_09090 PF00364 Biotin-requiring enzyme EQK04_09095 PF02785 Biotin carboxylase C-terminal domain EQK04_09095 PF00289 Biotin carboxylase, N-terminal domain EQK04_09095 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain EQK04_09100 PF00501 AMP-binding enzyme EQK04_09100 PF13193 AMP-binding enzyme C-terminal domain EQK04_09105 PF00441 Acyl-CoA dehydrogenase, C-terminal domain EQK04_09105 PF02770 Acyl-CoA dehydrogenase, middle domain EQK04_09105 PF02771 Acyl-CoA dehydrogenase, N-terminal domain EQK04_09110 PF02638 Glycosyl hydrolase-like 10 EQK04_09120 PF08220 DeoR-like helix-turn-helix domain EQK04_09120 PF00455 DeoR C terminal sensor domain EQK04_09125 PF14552 Tautomerase enzyme EQK04_09135 PF17853 GGDEF-like domain EQK04_09135 PF05651 Putative sugar diacid recognition EQK04_09135 PF13556 PucR C-terminal helix-turn-helix domain EQK04_09140 PF01565 FAD binding domain EQK04_09140 PF02913 FAD linked oxidases, C-terminal domain EQK04_09145 PF13183 4Fe-4S dicluster domain EQK04_09145 PF02754 Cysteine-rich domain EQK04_09150 PF03323 Bacillus/Clostridium GerA spore germination protein EQK04_09155 PF03845 Spore germination protein EQK04_09165 PF12728 Helix-turn-helix domain EQK04_09170 PF04138 GtrA-like protein EQK04_09175 PF00483 Nucleotidyl transferase EQK04_09180 PF09335 SNARE associated Golgi protein EQK04_09185 PF02602 Uroporphyrinogen-III synthase HemD EQK04_09195 PF00296 Luciferase-like monooxygenase EQK04_09210 PF01554 MatE EQK04_09215 PF02113 D-Ala-D-Ala carboxypeptidase 3 (S13) family EQK04_09220 PF01095 Pectinesterase EQK04_09225 PF04239 Protein of unknown function (DUF421) EQK04_09230 PF00355 Rieske [2Fe-2S] domain EQK04_09235 PF18267 Rubredoxin NAD+ reductase C-terminal domain EQK04_09235 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain EQK04_09235 PF07992 Pyridine nucleotide-disulphide oxidoreductase EQK04_09235 PF01077 Nitrite and sulphite reductase 4Fe-4S domain EQK04_09235 PF04324 BFD-like [2Fe-2S] binding domain EQK04_09240 PF00384 Molybdopterin oxidoreductase EQK04_09240 PF01568 Molydopterin dinucleotide binding domain EQK04_09240 PF04879 Molybdopterin oxidoreductase Fe4S4 domain EQK04_09245 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain EQK04_09245 PF07992 Pyridine nucleotide-disulphide oxidoreductase EQK04_09245 PF18267 Rubredoxin NAD+ reductase C-terminal domain EQK04_09245 PF04324 BFD-like [2Fe-2S] binding domain EQK04_09250 PF07690 Major Facilitator Superfamily EQK04_09255 PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster EQK04_09255 PF07992 Pyridine nucleotide-disulphide oxidoreductase EQK04_09260 PF00310 Glutamine amidotransferases class-II EQK04_09260 PF01493 GXGXG motif EQK04_09260 PF01645 Conserved region in glutamate synthase EQK04_09260 PF04898 Glutamate synthase central domain EQK04_09265 PF03466 LysR substrate binding domain EQK04_09265 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family EQK04_09270 PF00005 ABC transporter EQK04_09270 PF00664 ABC transporter transmembrane region EQK04_09275 PF00005 ABC transporter EQK04_09275 PF00664 ABC transporter transmembrane region EQK04_09280 PF13411 MerR HTH family regulatory protein EQK04_09280 PF06445 GyrI-like small molecule binding domain EQK04_09285 PF00583 Acetyltransferase (GNAT) family EQK04_09290 PF00171 Aldehyde dehydrogenase family EQK04_09295 PF01472 PUA domain EQK04_09295 PF00696 Amino acid kinase family EQK04_09300 PF14748 Pyrroline-5-carboxylate reductase dimerisation EQK04_09300 PF03807 NADP oxidoreductase coenzyme F420-dependent EQK04_09305 PF00067 Cytochrome P450 EQK04_09310 PF00384 Molybdopterin oxidoreductase EQK04_09310 PF04879 Molybdopterin oxidoreductase Fe4S4 domain EQK04_09310 PF01568 Molydopterin dinucleotide binding domain EQK04_09315 PF00457 Glycosyl hydrolases family 11 EQK04_09320 PF00370 FGGY family of carbohydrate kinases, N-terminal domain EQK04_09320 PF02782 FGGY family of carbohydrate kinases, C-terminal domain EQK04_09325 PF01261 Xylose isomerase-like TIM barrel EQK04_09330 PF00480 ROK family EQK04_09335 PF17851 Beta xylosidase C-terminal Concanavalin A-like domain EQK04_09335 PF04616 Glycosyl hydrolases family 43 EQK04_09345 PF01588 Putative tRNA binding domain EQK04_09355 PF14158 YndJ-like protein EQK04_09360 PF13761 Domain of unknown function (DUF4166) EQK04_09370 PF00440 Bacterial regulatory proteins, tetR family EQK04_09370 PF13305 Tetracyclin repressor-like, C-terminal domain EQK04_09375 PF00753 Metallo-beta-lactamase superfamily EQK04_09380 PF06445 GyrI-like small molecule binding domain EQK04_09385 PF08279 HTH domain EQK04_09385 PF13280 WYL domain EQK04_09395 PF01022 Bacterial regulatory protein, arsR family EQK04_09400 PF00324 Amino acid permease EQK04_09415 PF03972 MmgE/PrpD family EQK04_09420 PF00285 Citrate synthase, C-terminal domain EQK04_09425 PF04238 Protein of unknown function (DUF420) EQK04_09435 PF06725 3D domain EQK04_09435 PF01476 LysM domain EQK04_09440 PF00271 Helicase conserved C-terminal domain EQK04_09440 PF16124 RecQ zinc-binding EQK04_09440 PF00270 DEAD/DEAH box helicase EQK04_09440 PF09382 RQC domain EQK04_09440 PF00570 HRDC domain EQK04_09450 PF01258 Prokaryotic dksA/traR C4-type zinc finger EQK04_09460 PF08000 Bacterial PH domain EQK04_09475 PF00171 Aldehyde dehydrogenase family EQK04_09480 PF13249 Squalene-hopene cyclase N-terminal domain EQK04_09480 PF13243 Squalene-hopene cyclase C-terminal domain EQK04_09485 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain EQK04_09485 PF02777 Iron/manganese superoxide dismutases, C-terminal domain EQK04_09490 PF01758 Sodium Bile acid symporter family EQK04_09495 PF00364 Biotin-requiring enzyme EQK04_09495 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) EQK04_09495 PF02817 e3 binding domain EQK04_09500 PF16870 2-oxoglutarate dehydrogenase C-terminal EQK04_09500 PF02779 Transketolase, pyrimidine binding domain EQK04_09500 PF00676 Dehydrogenase E1 component EQK04_09500 PF16078 2-oxoglutarate dehydrogenase N-terminus EQK04_09505 PF00092 von Willebrand factor type A domain EQK04_09510 PF07728 AAA domain (dynein-related subfamily) EQK04_09515 PF00080 Copper/zinc superoxide dismutase (SODC) EQK04_09515 PF13627 Prokaryotic lipoprotein-attachment site EQK04_09520 PF00877 NlpC/P60 family EQK04_09520 PF01476 LysM domain EQK04_09525 PF10372 Bacterial membrane-spanning protein N-terminus EQK04_09525 PF02457 DisA bacterial checkpoint controller nucleotide-binding EQK04_09530 PF01554 MatE EQK04_09535 PF02585 GlcNAc-PI de-N-acetylase EQK04_09540 PF08830 Protein of unknown function (DUF1806) EQK04_09550 PF00892 EamA-like transporter family EQK04_09565 PF01638 HxlR-like helix-turn-helix EQK04_09570 PF00881 Nitroreductase family EQK04_09575 PF11755 Protein of unknown function (DUF3311) EQK04_09580 PF00474 Sodium:solute symporter family EQK04_09585 PF01471 Putative peptidoglycan binding domain EQK04_09585 PF03572 Peptidase family S41 EQK04_09585 PF17820 PDZ domain EQK04_09590 PF08241 Methyltransferase domain EQK04_09605 PF02557 D-alanyl-D-alanine carboxypeptidase EQK04_09610 PF01048 Phosphorylase superfamily EQK04_09615 PF14191 YodL-like EQK04_09620 PF01569 PAP2 superfamily EQK04_09625 PF14162 YozD-like protein EQK04_09635 PF06855 YozE SAM-like fold EQK04_09640 PF14122 YokU-like protein, putative antitoxin EQK04_09645 PF12544 Lysine-2,3-aminomutase EQK04_09650 PF00158 Sigma-54 interaction domain EQK04_09650 PF13426 PAS domain EQK04_09650 PF02954 Bacterial regulatory protein, Fis family EQK04_09655 PF00535 Glycosyl transferase family 2 EQK04_09670 PF12996 DUF based on E. rectale Gene description (DUF3880) EQK04_09680 PF02719 Polysaccharide biosynthesis protein EQK04_09685 PF01641 SelR domain EQK04_09690 PF01625 Peptide methionine sulfoxide reductase EQK04_09695 PF01047 MarR family EQK04_09715 PF17431 Uncharacterized YmpT-like EQK04_09720 PF09911 Uncharacterized protein conserved in bacteria (DUF2140) EQK04_09725 PF13472 GDSL-like Lipase/Acylhydrolase family EQK04_09730 PF02630 SCO1/SenC EQK04_09735 PF02645 Uncharacterised protein, DegV family COG1307 EQK04_09740 PF10751 Protein of unknown function (DUF2535) EQK04_09745 PF00291 Pyridoxal-phosphate dependent enzyme EQK04_09745 PF00585 C-terminal regulatory domain of Threonine dehydratase EQK04_09750 PF00158 Sigma-54 interaction domain EQK04_09750 PF08461 Ribonuclease R winged-helix domain EQK04_09755 PF03006 Haemolysin-III related EQK04_09765 PF00186 Dihydrofolate reductase EQK04_09770 PF00303 Thymidylate synthase EQK04_09775 PF04608 Phosphatidylglycerophosphatase A EQK04_09780 PF14005 YpjP-like protein EQK04_09785 PF04445 Putative SAM-dependent methyltransferase EQK04_09790 PF06491 Disulphide isomerase EQK04_09795 PF00920 Dehydratase family EQK04_09800 PF08712 Scaffold protein Nfu/NifU N terminal EQK04_09800 PF13769 Virulence factor EQK04_09805 PF01966 HD domain EQK04_09810 PF00255 Glutathione peroxidase EQK04_09815 PF01268 Formate--tetrahydrofolate ligase EQK04_09820 PF04204 Homoserine O-succinyltransferase EQK04_09825 PF06925 Monogalactosyldiacylglycerol (MGDG) synthase EQK04_09825 PF00534 Glycosyl transferases group 1 EQK04_09835 PF00313 'Cold-shock' DNA-binding domain EQK04_09845 PF10782 Zinc-finger EQK04_09850 PF13456 Reverse transcriptase-like EQK04_09855 PF02592 Putative vitamin uptake transporter EQK04_09860 PF13456 Reverse transcriptase-like EQK04_09870 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain EQK04_09870 PF01367 5'-3' exonuclease, C-terminal SAM fold EQK04_09880 PF00350 Dynamin family EQK04_09890 PF04140 Isoprenylcysteine carboxyl methyltransferase (ICMT) family EQK04_09895 PF00195 Chalcone and stilbene synthases, N-terminal domain EQK04_09895 PF02797 Chalcone and stilbene synthases, C-terminal domain EQK04_09900 PF13673 Acetyltransferase (GNAT) domain EQK04_09900 PF04229 GrpB protein EQK04_09905 PF01522 Polysaccharide deacetylase EQK04_09910 PF00860 Permease family EQK04_09920 PF02074 Carboxypeptidase Taq (M32) metallopeptidase EQK04_09925 PF13307 Helicase C-terminal domain EQK04_09935 PF02926 THUMP domain EQK04_09935 PF01170 Putative RNA methylase family UPF0020 EQK04_09945 PF05103 DivIVA protein EQK04_09950 PF06908 YspA SLOG family EQK04_09955 PF11122 Inner spore coat protein D EQK04_09960 PF13482 RNase_H superfamily EQK04_09965 PF09369 Domain of unknown function (DUF1998) EQK04_09965 PF00270 DEAD/DEAH box helicase EQK04_09965 PF00271 Helicase conserved C-terminal domain EQK04_09970 PF00724 NADH:flavin oxidoreductase / NADH oxidase family EQK04_09975 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 EQK04_09985 PF14179 YppG-like protein EQK04_10005 PF10720 Protein of unknown function (DUF2515) EQK04_10010 PF03838 Recombination protein U EQK04_10015 PF00912 Transglycosylase EQK04_10015 PF00905 Penicillin binding protein transpeptidase domain EQK04_10025 PF10576 Iron-sulfur binding domain of endonuclease III EQK04_10025 PF00730 HhH-GPD superfamily base excision DNA repair protein EQK04_10025 PF00633 Helix-hairpin-helix motif EQK04_10030 PF07261 Replication initiation and membrane attachment EQK04_10035 PF01336 OB-fold nucleic acid binding domain EQK04_10035 PF00152 tRNA synthetases class II (D, K and N) EQK04_10040 PF03413 Peptidase propeptide and YPEB domain EQK04_10040 PF17881 Domain of unknown function (DUF5590) EQK04_10045 PF14084 Protein of unknown function (DUF4264) EQK04_10050 PF00929 Exonuclease EQK04_10050 PF13307 Helicase C-terminal domain EQK04_10050 PF04851 Type III restriction enzyme, res subunit EQK04_10055 PF02261 Aspartate decarboxylase EQK04_10060 PF02569 Pantoate-beta-alanine ligase EQK04_10065 PF02548 Ketopantoate hydroxymethyltransferase EQK04_10070 PF08279 HTH domain EQK04_10070 PF03099 Biotin/lipoate A/B protein ligase family EQK04_10070 PF02237 Biotin protein ligase C terminal domain EQK04_10075 PF13735 tRNA nucleotidyltransferase domain 2 putative EQK04_10075 PF12627 Probable RNA and SrmB- binding site of polymerase A EQK04_10075 PF01743 Poly A polymerase head domain EQK04_10080 PF13439 Glycosyltransferase Family 4 EQK04_10080 PF00534 Glycosyl transferases group 1 EQK04_10085 PF02585 GlcNAc-PI de-N-acetylase EQK04_10090 PF02142 MGS-like domain EQK04_10095 PF05173 Dihydrodipicolinate reductase, C-terminus EQK04_10095 PF01113 Dihydrodipicolinate reductase, N-terminus EQK04_10100 PF03819 MazG nucleotide pyrophosphohydrolase domain EQK04_10105 PF10035 Uncharacterized protein conserved in bacteria (DUF2179) EQK04_10105 PF02588 Uncharacterised 5xTM membrane BCR, YitT family COG1284 EQK04_10110 PF09577 Sporulation protein YpjB (SpoYpjB) EQK04_10115 PF07187 Protein of unknown function (DUF1405) EQK04_10120 PF13442 Cytochrome C oxidase, cbb3-type, subunit III EQK04_10120 PF00032 Cytochrome b(C-terminal)/b6/petD EQK04_10125 PF00033 Cytochrome b/b6/petB EQK04_10130 PF00355 Rieske [2Fe-2S] domain EQK04_10135 PF10673 Protein of unknown function (DUF2487) EQK04_10140 PF08858 IDEAL domain EQK04_10140 PF08864 UPF0302 domain EQK04_10150 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) EQK04_10155 PF01842 ACT domain EQK04_10155 PF02153 Prephenate dehydrogenase EQK04_10160 PF00155 Aminotransferase class I and II EQK04_10165 PF00290 Tryptophan synthase alpha chain EQK04_10170 PF00291 Pyridoxal-phosphate dependent enzyme EQK04_10175 PF00697 N-(5'phosphoribosyl)anthranilate (PRA) isomerase EQK04_10180 PF00218 Indole-3-glycerol phosphate synthase EQK04_10185 PF00591 Glycosyl transferase family, a/b domain EQK04_10185 PF02885 Glycosyl transferase family, helical bundle domain EQK04_10190 PF00425 chorismate binding enzyme EQK04_10190 PF04715 Anthranilate synthase component I, N terminal region EQK04_10195 PF07736 Chorismate mutase type I EQK04_10200 PF01761 3-dehydroquinate synthase EQK04_10205 PF01264 Chorismate synthase EQK04_10210 PF03705 CheR methyltransferase, all-alpha domain EQK04_10210 PF01739 CheR methyltransferase, SAM binding domain EQK04_10215 PF00334 Nucleoside diphosphate kinase EQK04_10220 PF00348 Polyprenyl synthetase EQK04_10225 PF01209 ubiE/COQ5 methyltransferase family EQK04_10230 PF07307 Heptaprenyl diphosphate synthase (HEPPP synthase) subunit 1 EQK04_10235 PF02081 Tryptophan RNA-binding attenuator protein EQK04_10240 PF01227 GTP cyclohydrolase I EQK04_10245 PF00216 Bacterial DNA-binding protein EQK04_10250 PF09547 Stage IV sporulation protein A (spore_IV_A) EQK04_10260 PF10966 Protein of unknown function (DUF2768) EQK04_10265 PF01210 NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus EQK04_10265 PF07479 NAD-dependent glycerol-3-phosphate dehydrogenase C-terminus EQK04_10270 PF14714 KH-domain-like of EngA bacterial GTPase enzymes, C-terminal EQK04_10270 PF01926 50S ribosome-binding GTPase EQK04_10280 PF14045 YIEGIA protein EQK04_10290 PF14140 YpzI-like protein EQK04_10300 PF01070 FMN-dependent dehydrogenase EQK04_10305 PF00575 S1 RNA binding domain EQK04_10310 PF02224 Cytidylate kinase EQK04_10315 PF17313 Family of unknown function (DUF5359) EQK04_10320 PF12945 Flagellar protein YcgR EQK04_10320 PF07238 PilZ domain EQK04_10325 PF14620 YpeB sporulation EQK04_10325 PF03413 Peptidase propeptide and YPEB domain EQK04_10330 PF01471 Putative peptidoglycan binding domain EQK04_10330 PF07486 Cell Wall Hydrolase EQK04_10335 PF13367 PrsW family intramembrane metalloprotease EQK04_10345 PF00208 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase EQK04_10345 PF02812 Glu/Leu/Phe/Val dehydrogenase, dimerisation domain EQK04_10350 PF05389 Negative regulator of genetic competence (MecA) EQK04_10355 PF00149 Calcineurin-like phosphoesterase EQK04_10360 PF10864 Protein of unknown function (DUF2663) EQK04_10365 PF01476 LysM domain EQK04_10370 PF02517 CPBP intramembrane metalloprotease EQK04_10375 PF00270 DEAD/DEAH box helicase EQK04_10375 PF00271 Helicase conserved C-terminal domain EQK04_10380 PF14493 Helix-turn-helix domain EQK04_10390 PF12822 ECF transporter, substrate-specific component EQK04_10395 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain EQK04_10395 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain EQK04_10395 PF01842 ACT domain EQK04_10400 PF01551 Peptidase family M23 EQK04_10400 PF01476 LysM domain EQK04_10410 PF08281 Sigma-70, region 4 EQK04_10410 PF04542 Sigma-70 region 2 EQK04_10415 PF00989 PAS fold EQK04_10415 PF00512 His Kinase A (phospho-acceptor) domain EQK04_10415 PF00672 HAMP domain EQK04_10415 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase EQK04_10415 PF18698 Histidine kinase sensor domain EQK04_10420 PF00072 Response regulator receiver domain EQK04_10420 PF00486 Transcriptional regulatory protein, C terminal EQK04_10425 PF01578 Cytochrome C assembly protein EQK04_10430 PF05140 ResB-like family EQK04_10435 PF00578 AhpC/TSA family EQK04_10440 PF00849 RNA pseudouridylate synthase EQK04_10440 PF01479 S4 domain EQK04_10445 PF07670 Nucleoside recognition EQK04_10450 PF07670 Nucleoside recognition EQK04_10455 PF07943 Penicillin-binding protein 5, C-terminal domain EQK04_10455 PF00768 D-alanyl-D-alanine carboxypeptidase EQK04_10460 PF13047 Protein of unknown function (DUF3907) EQK04_10465 PF04079 Segregation and condensation complex subunit ScpB EQK04_10470 PF02616 Segregation and condensation protein ScpA EQK04_10480 PF03745 Domain of unknown function (DUF309) EQK04_10490 PF00583 Acetyltransferase (GNAT) family EQK04_10495 PF00885 6,7-dimethyl-8-ribityllumazine synthase EQK04_10500 PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase EQK04_10500 PF00925 GTP cyclohydrolase II EQK04_10505 PF00677 Lumazine binding domain EQK04_10530 PF07690 Major Facilitator Superfamily EQK04_10535 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD EQK04_10540 PF06207 Protein of unknown function (DUF1002) EQK04_10545 PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain EQK04_10545 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain EQK04_10550 PF03323 Bacillus/Clostridium GerA spore germination protein EQK04_10555 PF14097 Stage V sporulation protein AE1 EQK04_10560 PF03862 SpoVAC/SpoVAEB sporulation membrane protein EQK04_10565 PF07451 Stage V sporulation protein AD (SpoVAD) EQK04_10570 PF03862 SpoVAC/SpoVAEB sporulation membrane protein EQK04_10575 PF13782 Stage V sporulation protein AB EQK04_10580 PF12164 Stage V sporulation protein AA EQK04_10585 PF04545 Sigma-70, region 4 EQK04_10585 PF04539 Sigma-70 region 3 EQK04_10585 PF04542 Sigma-70 region 2 EQK04_10590 PF13581 Histidine kinase-like ATPase domain EQK04_10595 PF01740 STAS domain EQK04_10600 PF07943 Penicillin-binding protein 5, C-terminal domain EQK04_10600 PF00768 D-alanyl-D-alanine carboxypeptidase EQK04_10605 PF01048 Phosphorylase superfamily EQK04_10610 PF01676 Metalloenzyme superfamily EQK04_10615 PF00589 Phage integrase family EQK04_10615 PF02899 Phage integrase, N-terminal SAM-like domain EQK04_10620 PF14004 Protein of unknown function (DUF4227) EQK04_10625 PF01475 Ferric uptake regulator family EQK04_10630 PF01944 Stage II sporulation protein M EQK04_10635 PF05922 Peptidase inhibitor I9 EQK04_10635 PF00082 Subtilase family EQK04_10650 PF13673 Acetyltransferase (GNAT) domain EQK04_10660 PF00293 NUDIX domain EQK04_10665 PF00248 Aldo/keto reductase family EQK04_10675 PF12146 Serine aminopeptidase, S33 EQK04_10680 PF18801 response regulator aspartate phosphatase H, N terminal EQK04_10685 PF10827 Protein of unknown function (DUF2552) EQK04_10690 PF01521 Iron-sulphur cluster biosynthesis EQK04_10695 PF03330 Lytic transglycolase EQK04_10700 PF13673 Acetyltransferase (GNAT) domain EQK04_10700 PF04229 GrpB protein EQK04_10705 PF00583 Acetyltransferase (GNAT) family EQK04_10710 PF10787 Uncharacterised protein from bacillus cereus group EQK04_10715 PF00817 impB/mucB/samB family EQK04_10715 PF11799 impB/mucB/samB family C-terminal domain EQK04_10720 PF08863 YolD-like protein EQK04_10725 PF07690 Major Facilitator Superfamily EQK04_10730 PF00485 Phosphoribulokinase / Uridine kinase family EQK04_10735 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain EQK04_10735 PF07992 Pyridine nucleotide-disulphide oxidoreductase EQK04_10745 PF00106 short chain dehydrogenase EQK04_10750 PF00753 Metallo-beta-lactamase superfamily EQK04_10755 PF03807 NADP oxidoreductase coenzyme F420-dependent EQK04_10755 PF14748 Pyrroline-5-carboxylate reductase dimerisation EQK04_10770 PF04055 Radical SAM superfamily EQK04_10775 PF01546 Peptidase family M20/M25/M40 EQK04_10780 PF00724 NADH:flavin oxidoreductase / NADH oxidase family EQK04_10785 PF12146 Serine aminopeptidase, S33 EQK04_10790 PF12897 Alanine-glyoxylate amino-transferase EQK04_10795 PF12706 Beta-lactamase superfamily domain EQK04_10800 PF00479 Glucose-6-phosphate dehydrogenase, NAD binding domain EQK04_10800 PF02781 Glucose-6-phosphate dehydrogenase, C-terminal domain EQK04_10805 PF00392 Bacterial regulatory proteins, gntR family EQK04_10805 PF07702 UTRA domain EQK04_10810 PF00232 Glycosyl hydrolase family 1 EQK04_10815 PF02378 Phosphotransferase system, EIIC EQK04_10820 PF02255 PTS system, Lactose/Cellobiose specific IIA subunit EQK04_10825 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit EQK04_10840 PF06800 Sugar transport protein EQK04_10845 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase EQK04_10845 PF00393 6-phosphogluconate dehydrogenase, C-terminal domain EQK04_10850 PF11798 IMS family HHH motif EQK04_10850 PF11799 impB/mucB/samB family C-terminal domain EQK04_10850 PF00817 impB/mucB/samB family EQK04_10860 PF02096 60Kd inner membrane protein EQK04_10865 PF01584 CheW-like domain EQK04_10870 PF01546 Peptidase family M20/M25/M40 EQK04_10870 PF07687 Peptidase dimerisation domain EQK04_10875 PF01039 Carboxyl transferase domain EQK04_10885 PF03734 L,D-transpeptidase catalytic domain EQK04_10890 PF11728 Putative aromatic acid exporter C-terminal domain EQK04_10890 PF06081 Aromatic acid exporter family member 1 EQK04_10895 PF00005 ABC transporter EQK04_10900 PF00528 Binding-protein-dependent transport system inner membrane component EQK04_10905 PF00497 Bacterial extracellular solute-binding proteins, family 3 EQK04_10910 PF06491 Disulphide isomerase EQK04_10915 PF00781 Diacylglycerol kinase catalytic domain EQK04_10925 PF02817 e3 binding domain EQK04_10925 PF00364 Biotin-requiring enzyme EQK04_10925 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) EQK04_10930 PF02780 Transketolase, C-terminal domain EQK04_10930 PF02779 Transketolase, pyrimidine binding domain EQK04_10935 PF00676 Dehydrogenase E1 component EQK04_10940 PF07992 Pyridine nucleotide-disulphide oxidoreductase EQK04_10940 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain EQK04_10945 PF00871 Acetokinase family EQK04_10950 PF02812 Glu/Leu/Phe/Val dehydrogenase, dimerisation domain EQK04_10950 PF00208 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase EQK04_10955 PF01515 Phosphate acetyl/butaryl transferase EQK04_10960 PF00989 PAS fold EQK04_10960 PF00158 Sigma-54 interaction domain EQK04_10960 PF02954 Bacterial regulatory protein, Fis family EQK04_10965 PF11118 Protein of unknown function (DUF2627) EQK04_10970 PF03009 Glycerophosphoryl diester phosphodiesterase family EQK04_10975 PF18801 response regulator aspartate phosphatase H, N terminal EQK04_10980 PF08769 Sporulation initiation factor Spo0A C terminal EQK04_10980 PF00072 Response regulator receiver domain EQK04_10985 PF05580 SpoIVB peptidase S55 EQK04_10985 PF17820 PDZ domain EQK04_10990 PF13476 AAA domain EQK04_10995 PF02863 Arginine repressor, C-terminal domain EQK04_10995 PF01316 Arginine repressor, DNA binding domain EQK04_11000 PF01479 S4 domain EQK04_11000 PF01728 FtsJ-like methyltransferase EQK04_11005 PF02780 Transketolase, C-terminal domain EQK04_11005 PF02779 Transketolase, pyrimidine binding domain EQK04_11005 PF13292 1-deoxy-D-xylulose-5-phosphate synthase EQK04_11010 PF00348 Polyprenyl synthetase EQK04_11015 PF02609 Exonuclease VII small subunit EQK04_11020 PF02601 Exonuclease VII, large subunit EQK04_11020 PF13742 OB-fold nucleic acid binding domain EQK04_11025 PF02882 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain EQK04_11025 PF00763 Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain EQK04_11030 PF01029 NusB family EQK04_11035 PF03780 Asp23 family, cell envelope-related function EQK04_11040 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain EQK04_11040 PF02785 Biotin carboxylase C-terminal domain EQK04_11040 PF00289 Biotin carboxylase, N-terminal domain EQK04_11045 PF00364 Biotin-requiring enzyme EQK04_11050 PF12685 SpoIIIAH-like protein EQK04_11060 PF09581 Stage III sporulation protein AF (Spore_III_AF) EQK04_11065 PF09546 Stage III sporulation protein AE (spore_III_AE) EQK04_11070 PF06686 Stage III sporulation protein AC/AD protein family EQK04_11075 PF06686 Stage III sporulation protein AC/AD protein family EQK04_11080 PF09548 Stage III sporulation protein AB (spore_III_AB) EQK04_11090 PF10942 Protein of unknown function (DUF2619) EQK04_11095 PF08207 Elongation factor P (EF-P) KOW-like domain EQK04_11095 PF01132 Elongation factor P (EF-P) OB domain EQK04_11095 PF09285 Elongation factor P, C-terminal EQK04_11100 PF01321 Creatinase/Prolidase N-terminal domain EQK04_11100 PF00557 Metallopeptidase family M24 EQK04_11105 PF01220 Dehydroquinase class II EQK04_11110 PF11085 Conserved membrane protein YqhR EQK04_11115 PF07136 Protein of unknown function (DUF1385) EQK04_11125 PF01734 Patatin-like phospholipase EQK04_11130 PF01325 Iron dependent repressor, N-terminal DNA binding domain EQK04_11130 PF02742 Iron dependent repressor, metal binding and dimerisation domain EQK04_11135 PF03099 Biotin/lipoate A/B protein ligase family EQK04_11140 PF00581 Rhodanese-like domain EQK04_11145 PF02347 Glycine cleavage system P-protein EQK04_11150 PF02347 Glycine cleavage system P-protein EQK04_11155 PF01571 Aminomethyltransferase folate-binding domain EQK04_11155 PF08669 Glycine cleavage T-protein C-terminal barrel domain EQK04_11160 PF00176 SNF2 family N-terminal domain EQK04_11160 PF00271 Helicase conserved C-terminal domain EQK04_11165 PF11079 Bacterial protein YqhG of unknown function EQK04_11175 PF08671 Anti-repressor SinI EQK04_11175 PF01381 Helix-turn-helix EQK04_11180 PF12389 Camelysin metallo-endopeptidase EQK04_11195 PF13028 Protein of unknown function (DUF3889) EQK04_11200 PF14038 YqzE-like protein EQK04_11220 PF07963 Prokaryotic N-terminal methylation motif EQK04_11225 PF07963 Prokaryotic N-terminal methylation motif EQK04_11230 PF00482 Type II secretion system (T2SS), protein F EQK04_11235 PF00437 Type II/IV secretion system protein EQK04_11240 PF14361 RsbT co-antagonist protein rsbRD N-terminal domain EQK04_11240 PF01740 STAS domain EQK04_11250 PF03960 ArsC family EQK04_11255 PF11117 Protein of unknown function (DUF2626) EQK04_11260 PF00753 Metallo-beta-lactamase superfamily EQK04_11265 PF10958 Protein of unknown function (DUF2759) EQK04_11270 PF01910 Thiamine-binding protein EQK04_11275 PF07690 Major Facilitator Superfamily EQK04_11285 PF00246 Zinc carboxypeptidase EQK04_11290 PF00884 Sulfatase EQK04_11295 PF00480 ROK family EQK04_11300 PF06014 Bacterial protein of unknown function (DUF910) EQK04_11305 PF01694 Rhomboid family EQK04_11315 PF01812 5-formyltetrahydrofolate cyclo-ligase family EQK04_11320 PF00471 Ribosomal protein L33 EQK04_11340 PF00005 ABC transporter EQK04_11345 PF00005 ABC transporter EQK04_11350 PF00528 Binding-protein-dependent transport system inner membrane component EQK04_11355 PF00528 Binding-protein-dependent transport system inner membrane component EQK04_11360 PF12849 PBP superfamily domain EQK04_11370 PF07690 Major Facilitator Superfamily EQK04_11375 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain EQK04_11375 PF02777 Iron/manganese superoxide dismutases, C-terminal domain EQK04_11380 PF04306 Protein of unknown function (DUF456) EQK04_11385 PF06691 Protein of unknown function (DUF1189) EQK04_11390 PF13302 Acetyltransferase (GNAT) domain EQK04_11400 PF04551 GcpE protein EQK04_11415 PF00480 ROK family EQK04_11420 PF01475 Ferric uptake regulator family EQK04_11425 PF00950 ABC 3 transport family EQK04_11430 PF00005 ABC transporter EQK04_11435 PF10035 Uncharacterized protein conserved in bacteria (DUF2179) EQK04_11435 PF02588 Uncharacterised 5xTM membrane BCR, YitT family COG1284 EQK04_11440 PF11116 Protein of unknown function (DUF2624) EQK04_11445 PF01261 Xylose isomerase-like TIM barrel EQK04_11450 PF00270 DEAD/DEAH box helicase EQK04_11450 PF00271 Helicase conserved C-terminal domain EQK04_11460 PF02401 LytB protein EQK04_11465 PF01784 NIF3 (NGG1p interacting factor 3) EQK04_11470 PF04816 tRNA (adenine(22)-N(1))-methyltransferase EQK04_11475 PF13442 Cytochrome C oxidase, cbb3-type, subunit III EQK04_11480 PF04545 Sigma-70, region 4 EQK04_11480 PF04539 Sigma-70 region 3 EQK04_11480 PF04542 Sigma-70 region 2 EQK04_11480 PF00140 Sigma-70 factor, region 1.2 EQK04_11480 PF03979 Sigma-70 factor, region 1.1 EQK04_11485 PF08275 DNA primase catalytic core, N-terminal domain EQK04_11485 PF01807 CHC2 zinc finger EQK04_11485 PF10410 DnaB-helicase binding domain of primase EQK04_11490 PF02639 Uncharacterized BCR, YaiI/YqxD family COG1671 EQK04_11495 PF03618 Kinase/pyrophosphorylase EQK04_11500 PF00571 CBS domain EQK04_11500 PF08279 HTH domain EQK04_11505 PF02092 Glycyl-tRNA synthetase beta subunit EQK04_11510 PF02091 Glycyl-tRNA synthetase alpha subunit EQK04_11515 PF02565 Recombination protein O C terminal EQK04_11515 PF11967 Recombination protein O N terminal EQK04_11520 PF14006 YqzL-like protein EQK04_11525 PF01926 50S ribosome-binding GTPase EQK04_11525 PF07650 KH domain EQK04_11530 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region EQK04_11535 PF01219 Prokaryotic diacylglycerol kinase EQK04_11540 PF02130 Uncharacterized protein family UPF0054 EQK04_11545 PF07698 7TM receptor with intracellular HD hydrolase EQK04_11545 PF01966 HD domain EQK04_11545 PF07697 7TM-HD extracellular EQK04_11550 PF02562 PhoH-like protein EQK04_11555 PF06898 Putative stage IV sporulation protein YqfD EQK04_11560 PF07873 YabP family EQK04_11570 PF12127 SigmaW regulon antibacterial EQK04_11575 PF01957 NfeD-like C-terminal, partner-binding EQK04_11575 PF01972 Serine dehydrogenase proteinase EQK04_11580 PF09424 Yqey-like protein EQK04_11585 PF01165 Ribosomal protein S21 EQK04_11590 PF02690 Na+/Pi-cotransporter EQK04_11595 PF00919 Uncharacterized protein family UPF0004 EQK04_11595 PF01938 TRAM domain EQK04_11595 PF04055 Radical SAM superfamily EQK04_11600 PF04452 RNA methyltransferase EQK04_11610 PF00684 DnaJ central domain EQK04_11610 PF00226 DnaJ domain EQK04_11610 PF01556 DnaJ C terminal domain EQK04_11615 PF00012 Hsp70 protein EQK04_11620 PF01025 GrpE EQK04_11625 PF01628 HrcA protein C terminal domain EQK04_11630 PF06969 HemN C-terminal domain EQK04_11630 PF04055 Radical SAM superfamily EQK04_11635 PF03144 Elongation factor Tu domain 2 EQK04_11635 PF00679 Elongation factor G C-terminus EQK04_11635 PF00009 Elongation factor Tu GTP binding domain EQK04_11635 PF06421 GTP-binding protein LepA C-terminus EQK04_11640 PF12438 Protein of unknown function (DUF3679) EQK04_11645 PF07454 Stage II sporulation protein P (SpoIIP) EQK04_11650 PF03418 Germination protease EQK04_11655 PF01649 Ribosomal protein S20 EQK04_11660 PF06144 DNA polymerase III, delta subunit EQK04_11665 PF14141 YqzM-like protein EQK04_11670 PF00753 Metallo-beta-lactamase superfamily EQK04_11670 PF03772 Competence protein EQK04_11670 PF13567 Domain of unknown function (DUF4131) EQK04_11675 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region EQK04_11680 PF10531 SLBB domain EQK04_11685 PF03807 NADP oxidoreductase coenzyme F420-dependent EQK04_11685 PF14748 Pyrroline-5-carboxylate reductase dimerisation EQK04_11690 PF13649 Methyltransferase domain EQK04_11700 PF01966 HD domain EQK04_11705 PF01467 Cytidylyltransferase-like EQK04_11710 PF01985 CRS1 / YhbY (CRM) domain EQK04_11715 PF08501 Shikimate dehydrogenase substrate binding domain EQK04_11715 PF01488 Shikimate / quinate 5-dehydrogenase EQK04_11715 PF18317 Shikimate 5'-dehydrogenase C-terminal domain EQK04_11720 PF01926 50S ribosome-binding GTPase EQK04_11730 PF08970 Sporulation inhibitor A EQK04_11735 PF00657 GDSL-like Lipase/Acylhydrolase EQK04_11740 PF01522 Polysaccharide deacetylase EQK04_11745 PF13176 Tetratricopeptide repeat EQK04_11745 PF18801 response regulator aspartate phosphatase H, N terminal EQK04_11750 PF04545 Sigma-70, region 4 EQK04_11750 PF04542 Sigma-70 region 2 EQK04_11775 PF01522 Polysaccharide deacetylase EQK04_11775 PF13739 Deacetylase PdaC EQK04_11775 PF11738 Protein of unknown function (DUF3298) EQK04_11810 PF00005 ABC transporter EQK04_11835 PF00083 Sugar (and other) transporter EQK04_11840 PF02610 L-arabinose isomerase EQK04_11840 PF11762 L-arabinose isomerase C-terminal domain EQK04_11845 PF00596 Class II Aldolase and Adducin N-terminal domain EQK04_11855 PF00392 Bacterial regulatory proteins, gntR family EQK04_11865 PF01047 MarR family EQK04_11875 PF01380 SIS domain EQK04_11880 PF00215 Orotidine 5'-phosphate decarboxylase / HUMPS family EQK04_11885 PF01638 HxlR-like helix-turn-helix EQK04_11890 PF00135 Carboxylesterase family EQK04_11900 PF14176 YxiJ-like protein EQK04_11955 PF00905 Penicillin binding protein transpeptidase domain EQK04_11960 PF08028 Acyl-CoA dehydrogenase, C-terminal domain EQK04_11960 PF02770 Acyl-CoA dehydrogenase, middle domain EQK04_11960 PF02771 Acyl-CoA dehydrogenase, N-terminal domain EQK04_11965 PF00005 ABC transporter EQK04_11970 PF00497 Bacterial extracellular solute-binding proteins, family 3 EQK04_11975 PF00528 Binding-protein-dependent transport system inner membrane component EQK04_11980 PF00528 Binding-protein-dependent transport system inner membrane component EQK04_11985 PF05067 Manganese containing catalase EQK04_11990 PF00107 Zinc-binding dehydrogenase EQK04_11990 PF08240 Alcohol dehydrogenase GroES-like domain EQK04_12005 PF00465 Iron-containing alcohol dehydrogenase EQK04_12010 PF01235 Sodium:alanine symporter family EQK04_12015 PF03466 LysR substrate binding domain EQK04_12015 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family EQK04_12030 PF00005 ABC transporter EQK04_12035 PF08240 Alcohol dehydrogenase GroES-like domain EQK04_12035 PF00107 Zinc-binding dehydrogenase EQK04_12040 PF08241 Methyltransferase domain EQK04_12050 PF09501 Probable sporulation protein (Bac_small_yrzI) EQK04_12055 PF14143 YrhC-like protein EQK04_12060 PF01053 Cys/Met metabolism PLP-dependent enzyme EQK04_12065 PF00291 Pyridoxal-phosphate dependent enzyme EQK04_12070 PF01048 Phosphorylase superfamily EQK04_12075 PF13649 Methyltransferase domain EQK04_12080 PF10750 Protein of unknown function (DUF2536) EQK04_12085 PF07423 Domain of unknown function (DUF1510) EQK04_12090 PF03717 Penicillin-binding Protein dimerisation domain EQK04_12090 PF00905 Penicillin binding protein transpeptidase domain EQK04_12095 PF01272 Transcription elongation factor, GreA/GreB, C-term EQK04_12095 PF03449 Transcription elongation factor, N-terminal EQK04_12100 PF00485 Phosphoribulokinase / Uridine kinase family EQK04_12115 PF01596 O-methyltransferase EQK04_12120 PF02618 YceG-like family EQK04_12125 PF00108 Thiolase, N-terminal domain EQK04_12125 PF02803 Thiolase, C-terminal domain EQK04_12130 PF13193 AMP-binding enzyme C-terminal domain EQK04_12130 PF00501 AMP-binding enzyme EQK04_12135 PF02632 BioY family EQK04_12140 PF06949 Protein of unknown function (DUF1292) EQK04_12145 PF03652 Holliday junction resolvase EQK04_12150 PF06135 IreB regulatory phosphoprotein EQK04_12155 PF02272 DHHA1 domain EQK04_12155 PF01411 tRNA synthetases class II (A) EQK04_12155 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain EQK04_12160 PF01594 AI-2E family transporter EQK04_12165 PF00005 ABC transporter EQK04_12170 PF00497 Bacterial extracellular solute-binding proteins, family 3 EQK04_12175 PF00528 Binding-protein-dependent transport system inner membrane component EQK04_12180 PF00528 Binding-protein-dependent transport system inner membrane component EQK04_12195 PF05239 PRC-barrel domain EQK04_12200 PF14490 Helix-hairpin-helix containing domain EQK04_12200 PF18335 ATP-dependent RecD-like DNA helicase SH3 domain EQK04_12200 PF13538 UvrD-like helicase C-terminal domain EQK04_12205 PF07719 Tetratricopeptide repeat EQK04_12205 PF13181 Tetratricopeptide repeat EQK04_12215 PF00266 Aminotransferase class-V EQK04_12220 PF02082 Transcriptional regulator EQK04_12225 PF05496 Holliday junction DNA helicase RuvB P-loop domain EQK04_12225 PF12002 MgsA AAA+ ATPase C terminal EQK04_12225 PF16193 AAA C-terminal domain EQK04_12230 PF00899 ThiF family EQK04_12240 PF02938 GAD domain EQK04_12240 PF00152 tRNA synthetases class II (D, K and N) EQK04_12240 PF01336 OB-fold nucleic acid binding domain EQK04_12245 PF03129 Anticodon binding domain EQK04_12245 PF13393 Histidyl-tRNA synthetase EQK04_12250 PF08239 Bacterial SH3 domain EQK04_12250 PF01520 N-acetylmuramoyl-L-alanine amidase EQK04_12255 PF02580 D-Tyr-tRNA(Tyr) deacylase EQK04_12260 PF04607 Region found in RelA / SpoT proteins EQK04_12260 PF13291 ACT domain EQK04_12260 PF02824 TGS domain EQK04_12265 PF00156 Phosphoribosyl transferase domain EQK04_12270 PF10141 Single-strand DNA-specific exonuclease, C terminal domain EQK04_12270 PF17768 RecJ OB domain EQK04_12270 PF02272 DHHA1 domain EQK04_12270 PF01368 DHH family EQK04_12275 PF06305 Lipopolysaccharide assembly protein A domain EQK04_12280 PF02080 TrkA-C domain EQK04_12285 PF07549 SecD/SecF GG Motif EQK04_12285 PF02355 Protein export membrane protein EQK04_12290 PF13797 Post-transcriptional regulator EQK04_12295 PF14667 Polysaccharide biosynthesis C-terminal domain EQK04_12295 PF01943 Polysaccharide biosynthesis protein EQK04_12300 PF04239 Protein of unknown function (DUF421) EQK04_12305 PF12670 Protein of unknown function (DUF3792) EQK04_12310 PF02699 Preprotein translocase subunit EQK04_12315 PF01702 Queuine tRNA-ribosyltransferase EQK04_12320 PF02547 Queuosine biosynthesis protein EQK04_12325 PF11146 Protein of unknown function (DUF2905) EQK04_12330 PF05496 Holliday junction DNA helicase RuvB P-loop domain EQK04_12330 PF05491 RuvB C-terminal winged helix domain EQK04_12330 PF17864 RuvB AAA lid domain EQK04_12335 PF07499 RuvA, C-terminal domain EQK04_12335 PF01330 RuvA N terminal domain EQK04_12340 PF08955 BofC C-terminal domain EQK04_12340 PF08977 Bypass of Forespore C, N terminal EQK04_12355 PF01964 Radical SAM ThiC family EQK04_12355 PF13667 ThiC-associated domain EQK04_12365 PF09580 Sporulation lipoprotein YhcN/YlaJ (Spore_YhcN_YlaJ) EQK04_12370 PF01476 LysM domain EQK04_12375 PF02445 Quinolinate synthetase A protein EQK04_12380 PF01729 Quinolinate phosphoribosyl transferase, C-terminal domain EQK04_12380 PF02749 Quinolinate phosphoribosyl transferase, N-terminal domain EQK04_12385 PF02910 Fumarate reductase flavoprotein C-term EQK04_12385 PF00890 FAD binding domain EQK04_12390 PF00266 Aminotransferase class-V EQK04_12395 PF08279 HTH domain EQK04_12395 PF02829 3H domain EQK04_12400 PF01842 ACT domain EQK04_12400 PF00800 Prephenate dehydratase EQK04_12405 PF01842 ACT domain EQK04_12410 PF01926 50S ribosome-binding GTPase EQK04_12410 PF01018 GTP1/OBG EQK04_12410 PF09269 Domain of unknown function (DUF1967) EQK04_12415 PF14682 Sporulation initiation phospho-transferase B, C-terminal EQK04_12415 PF14689 Sensor_kinase_SpoOB-type, alpha-helical domain EQK04_12420 PF01016 Ribosomal L27 protein EQK04_12425 PF04327 Cysteine protease Prp EQK04_12430 PF00829 Ribosomal prokaryotic L21 protein EQK04_12435 PF02163 Peptidase family M50 EQK04_12440 PF01551 Peptidase family M23 EQK04_12445 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain EQK04_12450 PF03775 Septum formation inhibitor MinC, C-terminal domain EQK04_12455 PF04093 rod shape-determining protein MreD EQK04_12460 PF04085 rod shape-determining protein MreC EQK04_12470 PF04002 RadC-like JAB domain EQK04_12475 PF02545 Maf-like protein EQK04_12485 PF01478 Type IV leader peptidase family EQK04_12485 PF06750 Bacterial Peptidase A24 N-terminal domain EQK04_12490 PF02875 Mur ligase family, glutamate ligase domain EQK04_12490 PF08245 Mur ligase middle domain EQK04_12495 PF00133 tRNA synthetases class I (I, L, M and V) EQK04_12495 PF08264 Anticodon-binding domain of tRNA EQK04_12495 PF10458 Valyl tRNA synthetase tRNA binding arm EQK04_12510 PF01476 LysM domain EQK04_12515 PF00202 Aminotransferase class-III EQK04_12520 PF00490 Delta-aminolevulinic acid dehydratase EQK04_12525 PF02602 Uroporphyrinogen-III synthase HemD EQK04_12530 PF03900 Porphobilinogen deaminase, C-terminal domain EQK04_12530 PF01379 Porphobilinogen deaminase, dipyromethane cofactor binding domain EQK04_12535 PF01578 Cytochrome C assembly protein EQK04_12540 PF00745 Glutamyl-tRNAGlu reductase, dimerisation domain EQK04_12540 PF01488 Shikimate / quinate 5-dehydrogenase EQK04_12540 PF05201 Glutamyl-tRNAGlu reductase, N-terminal domain EQK04_12560 PF01926 50S ribosome-binding GTPase EQK04_12565 PF05362 Lon protease (S16) C-terminal proteolytic domain EQK04_12565 PF02190 ATP-dependent protease La (LON) substrate-binding domain EQK04_12565 PF00004 ATPase family associated with various cellular activities (AAA) EQK04_12570 PF05362 Lon protease (S16) C-terminal proteolytic domain EQK04_12570 PF00004 ATPase family associated with various cellular activities (AAA) EQK04_12575 PF06689 ClpX C4-type zinc finger EQK04_12575 PF10431 C-terminal, D2-small domain, of ClpB protein EQK04_12575 PF07724 AAA domain (Cdc48 subfamily) EQK04_12580 PF05697 Bacterial trigger factor protein (TF) EQK04_12580 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase EQK04_12580 PF05698 Bacterial trigger factor protein (TF) C-terminus EQK04_12590 PF00694 Aconitase C-terminal domain EQK04_12595 PF00330 Aconitase family (aconitate hydratase) EQK04_12600 PF00180 Isocitrate/isopropylmalate dehydrogenase EQK04_12605 PF00682 HMGL-like EQK04_12605 PF08502 LeuA allosteric (dimerisation) domain EQK04_12610 PF07991 Acetohydroxy acid isomeroreductase, NADPH-binding domain EQK04_12610 PF01450 Acetohydroxy acid isomeroreductase, catalytic domain EQK04_12615 PF01842 ACT domain EQK04_12615 PF10369 Small subunit of acetolactate synthase EQK04_12620 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain EQK04_12620 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain EQK04_12620 PF00205 Thiamine pyrophosphate enzyme, central domain EQK04_12625 PF01063 Amino-transferase class IV EQK04_12630 PF10282 Lactonase, 7-bladed beta-propeller EQK04_12635 PF06803 Protein of unknown function (DUF1232) EQK04_12640 PF04914 DltD protein EQK04_12645 PF00550 Phosphopantetheine attachment site EQK04_12650 PF03062 MBOAT, membrane-bound O-acyltransferase family EQK04_12655 PF13193 AMP-binding enzyme C-terminal domain EQK04_12655 PF00501 AMP-binding enzyme EQK04_12660 PF12459 D-Ala-teichoic acid biosynthesis protein EQK04_12685 PF02384 N-6 DNA Methylase EQK04_12690 PF08463 EcoEI R protein C-terminal EQK04_12690 PF00271 Helicase conserved C-terminal domain EQK04_12690 PF04851 Type III restriction enzyme, res subunit EQK04_12690 PF04313 Type I restriction enzyme R protein N terminus (HSDR_N) EQK04_12695 PF04740 LXG domain of WXG superfamily EQK04_12695 PF14449 Pre-toxin TG EQK04_12710 PF12850 Calcineurin-like phosphoesterase superfamily domain EQK04_12715 PF01725 Ham1 family EQK04_12720 PF03725 3' exoribonuclease family, domain 2 EQK04_12720 PF01138 3' exoribonuclease family, domain 1 EQK04_12725 PF10646 Sporulation and spore germination EQK04_12730 PF01177 Asp/Glu/Hydantoin racemase EQK04_12735 PF01047 MarR family EQK04_12740 PF00196 Bacterial regulatory proteins, luxR family EQK04_12765 PF01510 N-acetylmuramoyl-L-alanine amidase EQK04_12765 PF01471 Putative peptidoglycan binding domain EQK04_12770 PF05105 Bacteriophage holin family EQK04_12800 PF01832 Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase EQK04_12800 PF13457 GW (Gly-Tryp) dipeptide domain EQK04_12880 PF03354 Phage Terminase EQK04_12920 PF00589 Phage integrase family EQK04_12965 PF17356 Phage-like element PBSX protein XtrA EQK04_13005 PF00196 Bacterial regulatory proteins, luxR family EQK04_13010 PF03600 Citrate transporter EQK04_13015 PF03466 LysR substrate binding domain EQK04_13015 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family EQK04_13020 PF04303 PrpF protein EQK04_13025 PF03099 Biotin/lipoate A/B protein ligase family EQK04_13025 PF02237 Biotin protein ligase C terminal domain EQK04_13030 PF03061 Thioesterase superfamily EQK04_13035 PF13085 2Fe-2S iron-sulfur cluster binding domain EQK04_13035 PF13183 4Fe-4S dicluster domain EQK04_13040 PF00890 FAD binding domain EQK04_13040 PF02910 Fumarate reductase flavoprotein C-term EQK04_13045 PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit EQK04_13050 PF10702 Protein of unknown function (DUF2507) EQK04_13060 PF13840 ACT domain EQK04_13060 PF01842 ACT domain EQK04_13060 PF00696 Amino acid kinase family EQK04_13065 PF08459 UvrC Helix-hairpin-helix N-terminal EQK04_13065 PF01541 GIY-YIG catalytic domain EQK04_13065 PF02151 UvrB/uvrC motif EQK04_13070 PF00085 Thioredoxin EQK04_13075 PF06964 Alpha-L-arabinofuranosidase C-terminal domain EQK04_13080 PF01012 Electron transfer flavoprotein domain EQK04_13080 PF00766 Electron transfer flavoprotein FAD-binding domain EQK04_13085 PF01012 Electron transfer flavoprotein domain EQK04_13090 PF00378 Enoyl-CoA hydratase/isomerase EQK04_13095 PF08359 YsiA-like protein, C-terminal region EQK04_13095 PF00440 Bacterial regulatory proteins, tetR family EQK04_13100 PF13193 AMP-binding enzyme C-terminal domain EQK04_13100 PF00501 AMP-binding enzyme EQK04_13110 PF03994 Domain of Unknown Function (DUF350) EQK04_13115 PF01713 Smr domain EQK04_13115 PF00488 MutS domain V EQK04_13120 PF02811 PHP domain EQK04_13120 PF14716 Helix-hairpin-helix domain EQK04_13120 PF14791 DNA polymerase beta thumb EQK04_13125 PF02674 Colicin V production protein EQK04_13130 PF05164 Cell division protein ZapA EQK04_13135 PF11858 Domain of unknown function (DUF3378) EQK04_13135 PF01351 Ribonuclease HII EQK04_13140 PF01588 Putative tRNA binding domain EQK04_13140 PF17759 Phenylalanyl tRNA synthetase beta chain CLM domain EQK04_13140 PF03484 tRNA synthetase B5 domain EQK04_13140 PF03147 Ferredoxin-fold anticodon binding domain EQK04_13140 PF03483 B3/4 domain EQK04_13145 PF01409 tRNA synthetases class II core domain (F) EQK04_13145 PF02912 Aminoacyl tRNA synthetase class II, N-terminal domain EQK04_13150 PF08032 RNA 2'-O ribose methyltransferase substrate binding EQK04_13150 PF00588 SpoU rRNA Methylase family EQK04_13155 PF14098 Small, acid-soluble spore protein I EQK04_13160 PF02554 Carbon starvation protein CstA EQK04_13160 PF13722 5TM C-terminal transporter carbon starvation CstA EQK04_13165 PF05343 M42 glutamyl aminopeptidase EQK04_13175 PF06961 Protein of unknown function (DUF1294) EQK04_13180 PF00453 Ribosomal protein L20 EQK04_13185 PF01632 Ribosomal protein L35 EQK04_13190 PF00707 Translation initiation factor IF-3, C-terminal domain EQK04_13190 PF05198 Translation initiation factor IF-3, N-terminal domain EQK04_13200 PF13419 Haloacid dehalogenase-like hydrolase EQK04_13205 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain EQK04_13205 PF13426 PAS domain EQK04_13205 PF08447 PAS fold EQK04_13210 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) EQK04_13210 PF03129 Anticodon binding domain EQK04_13210 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain EQK04_13210 PF02824 TGS domain EQK04_13220 PF08812 YtxC-like family EQK04_13225 PF09335 SNARE associated Golgi protein EQK04_13230 PF07319 Primosomal protein DnaI N-terminus EQK04_13230 PF01695 IstB-like ATP binding protein EQK04_13235 PF07261 Replication initiation and membrane attachment EQK04_13240 PF03477 ATP cone domain EQK04_13250 PF02675 S-adenosylmethionine decarboxylase EQK04_13255 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain EQK04_13255 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain EQK04_13260 PF01121 Dephospho-CoA kinase EQK04_13265 PF02659 Putative manganese efflux pump EQK04_13270 PF01149 Formamidopyrimidine-DNA glycosylase N-terminal domain EQK04_13270 PF06831 Formamidopyrimidine-DNA glycosylase H2TH domain EQK04_13270 PF06827 Zinc finger found in FPG and IleRS EQK04_13275 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain EQK04_13275 PF00476 DNA polymerase family A EQK04_13275 PF01367 5'-3' exonuclease, C-terminal SAM fold EQK04_13280 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase EQK04_13280 PF00512 His Kinase A (phospho-acceptor) domain EQK04_13280 PF00989 PAS fold EQK04_13280 PF16736 Single Cache-like EQK04_13285 PF00486 Transcriptional regulatory protein, C terminal EQK04_13285 PF00072 Response regulator receiver domain EQK04_13290 PF02866 lactate/malate dehydrogenase, alpha/beta C-terminal domain EQK04_13290 PF00056 lactate/malate dehydrogenase, NAD binding domain EQK04_13295 PF00180 Isocitrate/isopropylmalate dehydrogenase EQK04_13300 PF00285 Citrate synthase, C-terminal domain EQK04_13305 PF04284 Protein of unknown function (DUF441) EQK04_13310 PF01594 AI-2E family transporter EQK04_13315 PF04186 FxsA cytoplasmic membrane protein EQK04_13320 PF00391 PEP-utilising enzyme, mobile domain EQK04_13320 PF00224 Pyruvate kinase, barrel domain EQK04_13320 PF02887 Pyruvate kinase, alpha/beta domain EQK04_13325 PF00365 Phosphofructokinase EQK04_13330 PF03255 Acetyl co-enzyme A carboxylase carboxyltransferase alpha subunit EQK04_13335 PF01039 Carboxyl transferase domain EQK04_13335 PF17848 Acetyl-coA carboxylase zinc finger domain EQK04_13340 PF00390 Malic enzyme, N-terminal domain EQK04_13340 PF03949 Malic enzyme, NAD binding domain EQK04_13345 PF17657 Bacterial DNA polymerase III alpha subunit finger domain EQK04_13345 PF02811 PHP domain EQK04_13345 PF07733 Bacterial DNA polymerase III alpha NTPase domain EQK04_13345 PF01336 OB-fold nucleic acid binding domain EQK04_13345 PF14579 Helix-hairpin-helix motif EQK04_13350 PF14034 Sporulation protein YtrH EQK04_13365 PF02272 DHHA1 domain EQK04_13365 PF01368 DHH family EQK04_13370 PF14007 YtpI-like protein EQK04_13380 PF00392 Bacterial regulatory proteins, gntR family EQK04_13380 PF03061 Thioesterase superfamily EQK04_13380 PF00571 CBS domain EQK04_13380 PF07085 DRTGG domain EQK04_13400 PF14698 Argininosuccinate lyase C-terminal EQK04_13400 PF00206 Lyase EQK04_13405 PF00764 Arginosuccinate synthase EQK04_13410 PF00994 Probable molybdopterin binding domain EQK04_13415 PF00871 Acetokinase family EQK04_13420 PF02384 N-6 DNA Methylase EQK04_13425 PF08534 Redoxin EQK04_13430 PF09579 Sporulation protein YtfJ (Spore_YtfJ) EQK04_13435 PF11167 Protein of unknown function (DUF2953) EQK04_13440 PF06271 RDD family EQK04_13445 PF01343 Peptidase family S49 EQK04_13450 PF01513 ATP-NAD kinase EQK04_13455 PF00270 DEAD/DEAH box helicase EQK04_13455 PF03880 DbpA RNA binding domain EQK04_13455 PF00271 Helicase conserved C-terminal domain EQK04_13460 PF00487 Fatty acid desaturase EQK04_13465 PF07730 Histidine kinase EQK04_13470 PF00196 Bacterial regulatory proteins, luxR family EQK04_13470 PF00072 Response regulator receiver domain EQK04_13475 PF01497 Periplasmic binding protein EQK04_13480 PF00072 Response regulator receiver domain EQK04_13480 PF00486 Transcriptional regulatory protein, C terminal EQK04_13485 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase EQK04_13490 PF00005 ABC transporter EQK04_13495 PF02687 FtsX-like permease family EQK04_13500 PF01979 Amidohydrolase family EQK04_13505 PF02525 Flavodoxin-like fold EQK04_13520 PF01810 LysE type translocator EQK04_13525 PF13193 AMP-binding enzyme C-terminal domain EQK04_13525 PF00501 AMP-binding enzyme EQK04_13530 PF00269 Small, acid-soluble spore proteins, alpha/beta type EQK04_13535 PF02926 THUMP domain EQK04_13535 PF02568 Thiamine biosynthesis protein (ThiI) EQK04_13540 PF00266 Aminotransferase class-V EQK04_13545 PF05525 Branched-chain amino acid transport protein EQK04_13550 PF05525 Branched-chain amino acid transport protein EQK04_13555 PF06160 Septation ring formation regulator, EzrA EQK04_13560 PF02811 PHP domain EQK04_13565 PF00440 Bacterial regulatory proteins, tetR family EQK04_13570 PF13185 GAF domain EQK04_13575 PF01479 S4 domain EQK04_13575 PF00163 Ribosomal protein S4/S9 N-terminal domain EQK04_13585 PF00857 Isochorismatase family EQK04_13595 PF01674 Lipase (class 2) EQK04_13600 PF03992 Antibiotic biosynthesis monooxygenase EQK04_13605 PF00579 tRNA synthetases class I (W and Y) EQK04_13605 PF01479 S4 domain EQK04_13610 PF00501 AMP-binding enzyme EQK04_13610 PF13193 AMP-binding enzyme C-terminal domain EQK04_13615 PF00583 Acetyltransferase (GNAT) family EQK04_13620 PF00571 CBS domain EQK04_13625 PF00850 Histone deacetylase domain EQK04_13630 PF00356 Bacterial regulatory proteins, lacI family EQK04_13635 PF00793 DAHP synthetase I family EQK04_13635 PF01817 Chorismate mutase type II EQK04_13640 PF11009 Protein of unknown function (DUF2847) EQK04_13645 PF12732 YtxH-like protein EQK04_13650 PF06103 Bacterial protein of unknown function (DUF948) EQK04_13655 PF02875 Mur ligase family, glutamate ligase domain EQK04_13655 PF08245 Mur ligase middle domain EQK04_13655 PF01225 Mur ligase family, catalytic domain EQK04_13660 PF09397 Ftsk gamma domain EQK04_13660 PF17854 FtsK alpha domain EQK04_13660 PF01580 FtsK/SpoIIIE family EQK04_13665 PF01588 Putative tRNA binding domain EQK04_13665 PF14794 Domain of unknown function (DUF4479) EQK04_13670 PF07285 Protein of unknown function (DUF1444) EQK04_13675 PF00085 Thioredoxin EQK04_13685 PF11071 Nucleoside 2-deoxyribosyltransferase YtoQ EQK04_13690 PF05343 M42 glutamyl aminopeptidase EQK04_13695 PF03413 Peptidase propeptide and YPEB domain EQK04_13700 PF00390 Malic enzyme, N-terminal domain EQK04_13700 PF03949 Malic enzyme, NAD binding domain EQK04_13705 PF00753 Metallo-beta-lactamase superfamily EQK04_13710 PF02390 Putative methyltransferase EQK04_13715 PF14165 YtzH-like protein EQK04_13720 PF01636 Phosphotransferase enzyme family EQK04_13725 PF00781 Diacylglycerol kinase catalytic domain EQK04_13740 PF00291 Pyridoxal-phosphate dependent enzyme EQK04_13745 PF03575 Peptidase family S51 EQK04_13750 PF01546 Peptidase family M20/M25/M40 EQK04_13755 PF00860 Permease family EQK04_13760 PF08220 DeoR-like helix-turn-helix domain EQK04_13765 PF00849 RNA pseudouridylate synthase EQK04_13765 PF01479 S4 domain EQK04_13770 PF14667 Polysaccharide biosynthesis C-terminal domain EQK04_13770 PF01943 Polysaccharide biosynthesis protein EQK04_13785 PF02028 BCCT, betaine/carnitine/choline family transporter EQK04_13790 PF03691 Uncharacterised protein family (UPF0167) EQK04_13795 PF10957 Sporulation protein Cse60 EQK04_13800 PF00581 Rhodanese-like domain EQK04_13805 PF04854 Protein of unknown function, DUF624 EQK04_13810 PF02894 Oxidoreductase family, C-terminal alpha/beta domain EQK04_13810 PF01408 Oxidoreductase family, NAD-binding Rossmann fold EQK04_13820 PF07470 Glycosyl Hydrolase Family 88 EQK04_13825 PF00528 Binding-protein-dependent transport system inner membrane component EQK04_13830 PF17853 GGDEF-like domain EQK04_13830 PF12833 Helix-turn-helix domain EQK04_13835 PF01638 HxlR-like helix-turn-helix EQK04_13840 PF07690 Major Facilitator Superfamily EQK04_13845 PF00248 Aldo/keto reductase family EQK04_13850 PF13416 Bacterial extracellular solute-binding protein EQK04_13855 PF00528 Binding-protein-dependent transport system inner membrane component EQK04_13860 PF01370 NAD dependent epimerase/dehydratase family EQK04_13865 PF01738 Dienelactone hydrolase family EQK04_13870 PF08264 Anticodon-binding domain of tRNA EQK04_13870 PF00133 tRNA synthetases class I (I, L, M and V) EQK04_13870 PF09334 tRNA synthetases class I (M) EQK04_13870 PF13603 Leucyl-tRNA synthetase, Domain 2 EQK04_13875 PF14074 Protein of unknown function (DUF4257) EQK04_13880 PF13426 PAS domain EQK04_13880 PF01740 STAS domain EQK04_13885 PF04791 LMBR1-like membrane protein EQK04_13890 PF12704 MacB-like periplasmic core domain EQK04_13890 PF02687 FtsX-like permease family EQK04_13895 PF00005 ABC transporter EQK04_13905 PF00005 ABC transporter EQK04_13910 PF00392 Bacterial regulatory proteins, gntR family EQK04_13925 PF10732 Protein of unknown function (DUF2524) EQK04_13930 PF04055 Radical SAM superfamily EQK04_13930 PF16199 Radical_SAM C-terminal domain EQK04_13935 PF06962 Putative rRNA methylase EQK04_13940 PF07070 SpoOM protein EQK04_13945 PF10776 Protein of unknown function (DUF2600) EQK04_13950 PF12146 Serine aminopeptidase, S33 EQK04_13955 PF00132 Bacterial transferase hexapeptide (six repeats) EQK04_13960 PF00733 Asparagine synthase EQK04_13960 PF13537 Glutamine amidotransferase domain EQK04_13965 PF02773 S-adenosylmethionine synthetase, C-terminal domain EQK04_13965 PF02772 S-adenosylmethionine synthetase, central domain EQK04_13965 PF00438 S-adenosylmethionine synthetase, N-terminal domain EQK04_13970 PF01293 Phosphoenolpyruvate carboxykinase EQK04_13975 PF10763 Protein of unknown function (DUF2584) EQK04_13980 PF00326 Prolyl oligopeptidase family EQK04_13985 PF01593 Flavin containing amine oxidoreductase EQK04_13990 PF00535 Glycosyl transferase family 2 EQK04_14010 PF00005 ABC transporter EQK04_14015 PF00528 Binding-protein-dependent transport system inner membrane component EQK04_14020 PF00293 NUDIX domain EQK04_14025 PF02342 TerD domain EQK04_14040 PF05105 Bacteriophage holin family EQK04_14050 PF00210 Ferritin-like domain EQK04_14060 PF13115 YtkA-like EQK04_14065 PF02664 S-Ribosylhomocysteinase (LuxS) EQK04_14070 PF01809 Putative membrane protein insertion efficiency factor EQK04_14075 PF00484 Carbonic anhydrase EQK04_14080 PF09223 ZinT (YodA) periplasmic lipocalin-like zinc-recruitment EQK04_14080 PF01297 Zinc-uptake complex component A periplasmic EQK04_14085 PF01197 Ribosomal protein L31 EQK04_14095 PF01654 Cytochrome bd terminal oxidase subunit I EQK04_14100 PF02322 Cytochrome bd terminal oxidase subunit II EQK04_14105 PF07561 Domain of Unknown Function (DUF1540) EQK04_14115 PF13378 Enolase C-terminal domain-like EQK04_14115 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain EQK04_14120 PF13193 AMP-binding enzyme C-terminal domain EQK04_14120 PF00501 AMP-binding enzyme EQK04_14125 PF00378 Enoyl-CoA hydratase/isomerase EQK04_14130 PF00561 alpha/beta hydrolase fold EQK04_14135 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain EQK04_14135 PF16582 Middle domain of thiamine pyrophosphate EQK04_14135 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain EQK04_14140 PF00425 chorismate binding enzyme EQK04_14145 PF01040 UbiA prenyltransferase family EQK04_14150 PF01258 Prokaryotic dksA/traR C4-type zinc finger EQK04_14155 PF03073 TspO/MBR family EQK04_14280 PF09515 Thiamine transporter protein (Thia_YuaJ) EQK04_14290 PF00583 Acetyltransferase (GNAT) family EQK04_14295 PF06803 Protein of unknown function (DUF1232) EQK04_14300 PF01098 Cell cycle protein EQK04_14305 PF01098 Cell cycle protein EQK04_14310 PF15975 Flotillin EQK04_14310 PF01145 SPFH domain / Band 7 family EQK04_14320 PF12867 DinB superfamily EQK04_14325 PF00465 Iron-containing alcohol dehydrogenase EQK04_14330 PF00171 Aldehyde dehydrogenase family EQK04_14350 PF01471 Putative peptidoglycan binding domain EQK04_14350 PF01510 N-acetylmuramoyl-L-alanine amidase EQK04_14355 PF04688 SPP1 phage holin EQK04_14360 PF10960 BhlA holin family EQK04_14385 PF09693 Phage uncharacterised protein (Phage_XkdX) EQK04_14390 PF09636 XkdW protein EQK04_14405 PF10076 Uncharacterised protein conserved in bacteria (DUF2313) EQK04_14410 PF04865 Baseplate J-like protein EQK04_14415 PF10934 Protein of unknown function (DUF2634) EQK04_14420 PF10844 Protein of unknown function (DUF2577) EQK04_14430 PF01476 LysM domain EQK04_14435 PF01464 Transglycosylase SLT domain EQK04_14435 PF01464 Transglycosylase SLT domain EQK04_14445 PF08890 Phage XkdN-like tail assembly chaperone protein, TAC EQK04_14455 PF09393 Phage tail tube protein EQK04_14460 PF04984 Phage tail sheath protein subtilisin-like domain EQK04_14460 PF17482 Phage tail sheath C-terminal domain EQK04_14460 PF17481 Phage tail sheath protein beta-sandwich domain EQK04_14475 PF04883 Bacteriophage HK97-gp10, putative tail-component EQK04_14480 PF12206 Domain of unknown function (DUF3599) EQK04_14485 PF11436 Protein of unknown function (DUF3199) EQK04_14490 PF05065 Phage capsid family EQK04_14495 PF14550 Putative phage serine protease XkdF EQK04_14500 PF04860 Phage portal protein EQK04_14505 PF17288 Terminase RNAseH like domain EQK04_14505 PF04466 Phage terminase large subunit EQK04_14510 PF10668 Phage terminase small subunit EQK04_14515 PF08281 Sigma-70, region 4 EQK04_14520 PF17356 Phage-like element PBSX protein XtrA EQK04_14525 PF05866 Endodeoxyribonuclease RusA EQK04_14540 PF01381 Helix-turn-helix EQK04_14550 PF06968 Biotin and Thiamin Synthesis associated domain EQK04_14550 PF04055 Radical SAM superfamily EQK04_14560 PF02673 Bacitracin resistance protein BacA EQK04_14565 PF01594 AI-2E family transporter EQK04_14575 PF02894 Oxidoreductase family, C-terminal alpha/beta domain EQK04_14575 PF01408 Oxidoreductase family, NAD-binding Rossmann fold EQK04_14580 PF01965 DJ-1/PfpI family EQK04_14585 PF02743 Cache domain EQK04_14585 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain EQK04_14585 PF00672 HAMP domain EQK04_14590 PF00672 HAMP domain EQK04_14590 PF02743 Cache domain EQK04_14590 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain EQK04_14595 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain EQK04_14595 PF00672 HAMP domain EQK04_14595 PF02743 Cache domain EQK04_14600 PF00672 HAMP domain EQK04_14600 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain EQK04_14600 PF02743 Cache domain EQK04_14615 PF03060 Nitronate monooxygenase EQK04_14620 PF01894 Uncharacterised protein family UPF0047 EQK04_14625 PF03471 Transporter associated domain EQK04_14625 PF01595 Cyclin M transmembrane N-terminal domain EQK04_14625 PF00571 CBS domain EQK04_14630 PF04298 Putative neutral zinc metallopeptidase EQK04_14640 PF07885 Ion channel EQK04_14640 PF02254 TrkA-N domain EQK04_14645 PF08868 YugN-like family EQK04_14655 PF00342 Phosphoglucose isomerase EQK04_14660 PF00465 Iron-containing alcohol dehydrogenase EQK04_14665 PF00465 Iron-containing alcohol dehydrogenase EQK04_14670 PF04070 Domain of unknown function (DUF378) EQK04_14675 PF00575 S1 RNA binding domain EQK04_14680 PF00155 Aminotransferase class I and II EQK04_14685 PF01037 Lrp/AsnC ligand binding domain EQK04_14690 PF08386 TAP-like protein EQK04_14690 PF00561 alpha/beta hydrolase fold EQK04_14695 PF08958 Domain of unknown function (DUF1871) EQK04_14700 PF00155 Aminotransferase class I and II EQK04_14705 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase EQK04_14705 PF00512 His Kinase A (phospho-acceptor) domain EQK04_14710 PF08810 Kinase associated protein B EQK04_14715 PF00929 Exonuclease EQK04_14720 PF07690 Major Facilitator Superfamily EQK04_14725 PF00912 Transglycosylase EQK04_14725 PF00905 Penicillin binding protein transpeptidase domain EQK04_14730 PF04134 Protein of unknown function, DUF393 EQK04_14735 PF17328 Family of unknown function (DUF5366) EQK04_14740 PF17203 Single cache domain 3 EQK04_14740 PF00989 PAS fold EQK04_14740 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase EQK04_14740 PF14689 Sensor_kinase_SpoOB-type, alpha-helical domain EQK04_14745 PF00072 Response regulator receiver domain EQK04_14770 PF03390 2-hydroxycarboxylate transporter family EQK04_14780 PF00361 Proton-conducting membrane transporter EQK04_14780 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus EQK04_14780 PF13244 Domain of unknown function (DUF4040) EQK04_14785 PF04039 Domain related to MnhB subunit of Na+/H+ antiporter EQK04_14790 PF00420 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L EQK04_14795 PF00361 Proton-conducting membrane transporter EQK04_14800 PF01899 Na+/H+ ion antiporter subunit EQK04_14805 PF04066 Multiple resistance and pH regulation protein F (MrpF / PhaF) EQK04_14810 PF03334 Na+/H+ antiporter subunit EQK04_14815 PF03061 Thioesterase superfamily EQK04_14820 PF00196 Bacterial regulatory proteins, luxR family EQK04_14820 PF00072 Response regulator receiver domain EQK04_14825 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase EQK04_14825 PF07730 Histidine kinase EQK04_14835 PF00348 Polyprenyl synthetase EQK04_14840 PF08181 DegQ (SacQ) family EQK04_14850 PF00563 EAL domain EQK04_14850 PF08668 HDOD domain EQK04_14855 PF17956 Nicotinate phosphoribosyltransferase C-terminal domain EQK04_14855 PF17767 Nicotinate phosphoribosyltransferase (NAPRTase) N-terminal domain EQK04_14855 PF04095 Nicotinate phosphoribosyltransferase (NAPRTase) family EQK04_14860 PF00857 Isochorismatase family EQK04_14865 PF07997 Protein of unknown function (DUF1694) EQK04_14870 PF14166 YueH-like protein EQK04_14875 PF10676 Spore germination protein gerPA/gerPF EQK04_14880 PF10676 Spore germination protein gerPA/gerPF EQK04_14885 PF01594 AI-2E family transporter EQK04_14890 PF10842 Protein of unknown function (DUF2642) EQK04_14900 PF01966 HD domain EQK04_14905 PF00106 short chain dehydrogenase EQK04_14910 PF17355 Family of unknown function (DUF5383) EQK04_14920 PF12538 DNA transporter EQK04_14920 PF01580 FtsK/SpoIIIE family EQK04_14925 PF10140 WXG100 protein secretion system (Wss), protein YukC EQK04_14930 PF08817 WXG100 protein secretion system (Wss), protein YukD EQK04_14935 PF06013 Proteins of 100 residues with WXG EQK04_14940 PF17853 GGDEF-like domain EQK04_14940 PF13556 PucR C-terminal helix-turn-helix domain EQK04_14940 PF06018 CodY GAF-like domain EQK04_14945 PF05222 Alanine dehydrogenase/PNT, N-terminal domain EQK04_14945 PF01262 Alanine dehydrogenase/PNT, C-terminal domain EQK04_14950 PF02632 BioY family EQK04_14955 PF13726 Na+-H+ antiporter family EQK04_14955 PF03553 Na+/H+ antiporter family EQK04_14960 PF02789 Cytosol aminopeptidase family, N-terminal domain EQK04_14960 PF00883 Cytosol aminopeptidase family, catalytic domain EQK04_14965 PF02681 Divergent PAP2 family EQK04_14970 PF06725 3D domain EQK04_14975 PF14068 Putative membrane protein EQK04_14980 PF07992 Pyridine nucleotide-disulphide oxidoreductase EQK04_14985 PF07992 Pyridine nucleotide-disulphide oxidoreductase EQK04_15000 PF13411 MerR HTH family regulatory protein EQK04_15000 PF07739 TipAS antibiotic-recognition domain EQK04_15005 PF10026 Predicted Zn-dependent protease (DUF2268) EQK04_15010 PF01521 Iron-sulphur cluster biosynthesis EQK04_15015 PF01678 Diaminopimelate epimerase EQK04_15020 PF07293 Protein of unknown function (DUF1450) EQK04_15025 PF07992 Pyridine nucleotide-disulphide oxidoreductase EQK04_15035 PF07315 Protein of unknown function (DUF1462) EQK04_15040 PF01106 NifU-like domain EQK04_15045 PF00326 Prolyl oligopeptidase family EQK04_15045 PF07676 WD40-like Beta Propeller Repeat EQK04_15050 PF08544 GHMP kinases C terminal EQK04_15050 PF00288 GHMP kinases N terminal domain EQK04_15055 PF00291 Pyridoxal-phosphate dependent enzyme EQK04_15060 PF03447 Homoserine dehydrogenase, NAD binding domain EQK04_15060 PF00742 Homoserine dehydrogenase EQK04_15060 PF01842 ACT domain EQK04_15065 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain EQK04_15065 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain EQK04_15075 PF04608 Phosphatidylglycerophosphatase A EQK04_15095 PF13344 Haloacid dehalogenase-like hydrolase EQK04_15100 PF01934 Protein of unknown function DUF86 EQK04_15105 PF06265 Protein of unknown function (DUF1027) EQK04_15110 PF09580 Sporulation lipoprotein YhcN/YlaJ (Spore_YhcN_YlaJ) EQK04_15115 PF04055 Radical SAM superfamily EQK04_15115 PF16881 N-terminal domain of lipoyl synthase of Radical_SAM family EQK04_15120 PF01551 Peptidase family M23 EQK04_15130 PF10903 Protein of unknown function (DUF2691) EQK04_15135 PF09560 Sporulation protein YunB (Spo_YunB) EQK04_15140 PF08827 Domain of unknown function (DUF1805) EQK04_15145 PF02872 5'-nucleotidase, C-terminal domain EQK04_15150 PF01904 Protein of unknown function DUF72 EQK04_15155 PF07905 Purine catabolism regulatory protein-like family EQK04_15155 PF13556 PucR C-terminal helix-turn-helix domain EQK04_15155 PF17853 GGDEF-like domain EQK04_15160 PF00190 Cupin EQK04_15165 PF07690 Major Facilitator Superfamily EQK04_15170 PF00266 Aminotransferase class-V EQK04_15175 PF04231 Endonuclease I EQK04_15185 PF01032 FecCD transport family EQK04_15190 PF01032 FecCD transport family EQK04_15195 PF01497 Periplasmic binding protein EQK04_15205 PF07859 alpha/beta hydrolase fold EQK04_15210 PF06146 Phosphate-starvation-inducible E EQK04_15215 PF00512 His Kinase A (phospho-acceptor) domain EQK04_15220 PF00486 Transcriptional regulatory protein, C terminal EQK04_15220 PF00072 Response regulator receiver domain EQK04_15225 PF04235 Protein of unknown function (DUF418) EQK04_15235 PF02525 Flavodoxin-like fold EQK04_15240 PF01370 NAD dependent epimerase/dehydratase family EQK04_15240 PF08338 Domain of unknown function (DUF1731) EQK04_15245 PF00440 Bacterial regulatory proteins, tetR family EQK04_15245 PF18665 Tetracyclin repressor-like, C-terminal domain EQK04_15260 PF01458 Uncharacterized protein family (UPF0051) EQK04_15265 PF01592 NifU-like N terminal domain EQK04_15270 PF00266 Aminotransferase class-V EQK04_15275 PF01458 Uncharacterized protein family (UPF0051) EQK04_15280 PF00005 ABC transporter EQK04_15285 PF02627 Carboxymuconolactone decarboxylase family EQK04_15290 PF03180 NLPA lipoprotein EQK04_15295 PF00528 Binding-protein-dependent transport system inner membrane component EQK04_15300 PF09383 NIL domain EQK04_15300 PF00005 ABC transporter EQK04_15305 PF02036 SCP-2 sterol transfer family EQK04_15310 PF00085 Thioredoxin EQK04_15315 PF01751 Toprim domain EQK04_15320 PF10830 Protein of unknown function (DUF2553) EQK04_15325 PF01597 Glycine cleavage H-protein EQK04_15330 PF03960 ArsC family EQK04_15335 PF02770 Acyl-CoA dehydrogenase, middle domain EQK04_15335 PF00441 Acyl-CoA dehydrogenase, C-terminal domain EQK04_15335 PF02771 Acyl-CoA dehydrogenase, N-terminal domain EQK04_15340 PF00108 Thiolase, N-terminal domain EQK04_15340 PF02803 Thiolase, C-terminal domain EQK04_15345 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain EQK04_15345 PF00378 Enoyl-CoA hydratase/isomerase EQK04_15345 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain EQK04_15350 PF14115 YuzL-like protein EQK04_15360 PF07875 Coat F domain EQK04_15365 PF10835 Protein of unknown function (DUF2573) EQK04_15370 PF00005 ABC transporter EQK04_15380 PF00106 short chain dehydrogenase EQK04_15390 PF13180 PDZ domain EQK04_15395 PF00072 Response regulator receiver domain EQK04_15395 PF00486 Transcriptional regulatory protein, C terminal EQK04_15400 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase EQK04_15400 PF00672 HAMP domain EQK04_15400 PF00512 His Kinase A (phospho-acceptor) domain EQK04_15405 PF00440 Bacterial regulatory proteins, tetR family EQK04_15410 PF00206 Lyase EQK04_15410 PF10415 Fumarase C C-terminus EQK04_15415 PF13113 Protein of unknown function (DUF3970) EQK04_15420 PF03323 Bacillus/Clostridium GerA spore germination protein EQK04_15425 PF03845 Spore germination protein EQK04_15430 PF05504 Spore germination B3/ GerAC like, C-terminal EQK04_15440 PF00196 Bacterial regulatory proteins, luxR family EQK04_15440 PF00072 Response regulator receiver domain EQK04_15445 PF00672 HAMP domain EQK04_15445 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase EQK04_15445 PF07730 Histidine kinase EQK04_15450 PF09922 Cell wall-active antibiotics response 4TMS YvqF EQK04_15460 PF04012 PspA/IM30 family EQK04_15470 PF01923 Cobalamin adenosyltransferase EQK04_15480 PF04166 Pyridoxal phosphate biosynthetic protein PdxA EQK04_15485 PF17042 Nucleotide-binding C-terminal domain EQK04_15485 PF07005 Sugar-binding N-terminal domain EQK04_15490 PF02954 Bacterial regulatory protein, Fis family EQK04_15490 PF00072 Response regulator receiver domain EQK04_15490 PF00158 Sigma-54 interaction domain EQK04_15505 PF00465 Iron-containing alcohol dehydrogenase EQK04_15510 PF00701 Dihydrodipicolinate synthetase family EQK04_15515 PF00005 ABC transporter EQK04_15520 PF01032 FecCD transport family EQK04_15525 PF01497 Periplasmic binding protein EQK04_15530 PF00295 Glycosyl hydrolases family 28 EQK04_15535 PF04295 D-galactarate dehydratase / Altronate hydrolase, C terminus EQK04_15535 PF08666 SAF domain EQK04_15540 PF08125 Mannitol dehydrogenase C-terminal domain EQK04_15540 PF01232 Mannitol dehydrogenase Rossmann domain EQK04_15545 PF00356 Bacterial regulatory proteins, lacI family EQK04_15550 PF02614 Glucuronate isomerase EQK04_15555 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase EQK04_15555 PF00512 His Kinase A (phospho-acceptor) domain EQK04_15560 PF00072 Response regulator receiver domain EQK04_15560 PF00486 Transcriptional regulatory protein, C terminal EQK04_15565 PF00005 ABC transporter EQK04_15570 PF01032 FecCD transport family EQK04_15575 PF01032 FecCD transport family EQK04_15580 PF01497 Periplasmic binding protein EQK04_15585 PF13520 Amino acid permease EQK04_15595 PF09575 Small spore protein J (Spore_SspJ) EQK04_15605 PF04307 LexA-binding, inner membrane-associated putative hydrolase EQK04_15610 PF00884 Sulfatase EQK04_15620 PF00528 Binding-protein-dependent transport system inner membrane component EQK04_15625 PF00248 Aldo/keto reductase family EQK04_15630 PF00480 ROK family EQK04_15635 PF00999 Sodium/hydrogen exchanger family EQK04_15640 PF03458 UPF0126 domain EQK04_15645 PF02600 Disulfide bond formation protein DsbB EQK04_15650 PF13462 Thioredoxin EQK04_15655 PF00403 Heavy-metal-associated domain EQK04_15660 PF00005 ABC transporter EQK04_15665 PF00950 ABC 3 transport family EQK04_15670 PF01297 Zinc-uptake complex component A periplasmic EQK04_15680 PF13977 BetI-type transcriptional repressor, C-terminal EQK04_15680 PF00440 Bacterial regulatory proteins, tetR family EQK04_15685 PF00072 Response regulator receiver domain EQK04_15685 PF08664 YcbB domain EQK04_15690 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase EQK04_15695 PF00206 Lyase EQK04_15695 PF10415 Fumarase C C-terminus EQK04_15700 PF00375 Sodium:dicarboxylate symporter family EQK04_15710 PF00403 Heavy-metal-associated domain EQK04_15715 PF00403 Heavy-metal-associated domain EQK04_15720 PF02583 Metal-sensitive transcriptional repressor EQK04_15730 PF00072 Response regulator receiver domain EQK04_15730 PF00990 Diguanylate cyclase, GGDEF domain EQK04_15755 PF01668 SmpB protein EQK04_15760 PF08206 Ribonuclease B OB domain EQK04_15760 PF00575 S1 RNA binding domain EQK04_15760 PF17876 Cold shock domain EQK04_15760 PF00773 RNB domain EQK04_15765 PF12146 Serine aminopeptidase, S33 EQK04_15770 PF03840 Preprotein translocase SecG subunit EQK04_15775 PF04014 Antidote-toxin recognition MazE, bacterial antitoxin EQK04_15775 PF18277 AbrB C-terminal domain EQK04_15780 PF01381 Helix-turn-helix EQK04_15795 PF01638 HxlR-like helix-turn-helix EQK04_15800 PF00528 Binding-protein-dependent transport system inner membrane component EQK04_15805 PF04069 Substrate binding domain of ABC-type glycine betaine transport system EQK04_15810 PF00528 Binding-protein-dependent transport system inner membrane component EQK04_15815 PF00005 ABC transporter EQK04_15815 PF00571 CBS domain EQK04_15820 PF12802 MarR family EQK04_15825 PF01914 MarC family integral membrane protein EQK04_15835 PF00583 Acetyltransferase (GNAT) family EQK04_15855 PF00005 ABC transporter EQK04_15865 PF00113 Enolase, C-terminal TIM barrel domain EQK04_15865 PF03952 Enolase, N-terminal domain EQK04_15870 PF06415 BPG-independent PGAM N-terminus (iPGM_N) EQK04_15870 PF01676 Metalloenzyme superfamily EQK04_15875 PF00121 Triosephosphate isomerase EQK04_15880 PF00162 Phosphoglycerate kinase EQK04_15885 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain EQK04_15885 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain EQK04_15890 PF04198 Putative sugar-binding domain EQK04_15895 PF00324 Amino acid permease EQK04_15900 PF00202 Aminotransferase class-III EQK04_15905 PF02954 Bacterial regulatory protein, Fis family EQK04_15905 PF13426 PAS domain EQK04_15905 PF00158 Sigma-54 interaction domain EQK04_15910 PF07729 FCD domain EQK04_15910 PF00392 Bacterial regulatory proteins, gntR family EQK04_15915 PF04552 Sigma-54, DNA binding domain EQK04_15915 PF04963 Sigma-54 factor, core binding domain EQK04_15915 PF00309 Sigma-54 factor, Activator interacting domain (AID) EQK04_15920 PF09628 YvfG protein EQK04_15925 PF01554 MatE EQK04_15930 PF00005 ABC transporter EQK04_15930 PF08352 Oligopeptide/dipeptide transporter, C-terminal region EQK04_15935 PF00005 ABC transporter EQK04_15935 PF08352 Oligopeptide/dipeptide transporter, C-terminal region EQK04_15940 PF00528 Binding-protein-dependent transport system inner membrane component EQK04_15945 PF00528 Binding-protein-dependent transport system inner membrane component EQK04_15950 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle EQK04_15955 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family EQK04_15960 PF17836 PglD N-terminal domain EQK04_15960 PF00132 Bacterial transferase hexapeptide (six repeats) EQK04_15965 PF02397 Bacterial sugar transferase EQK04_15970 PF14667 Polysaccharide biosynthesis C-terminal domain EQK04_15970 PF01943 Polysaccharide biosynthesis protein EQK04_15975 PF04230 Polysaccharide pyruvyl transferase EQK04_15980 PF00535 Glycosyl transferase family 2 EQK04_15990 PF00534 Glycosyl transferases group 1 EQK04_15990 PF13439 Glycosyltransferase Family 4 EQK04_15995 PF00535 Glycosyl transferase family 2 EQK04_16000 PF13439 Glycosyltransferase Family 4 EQK04_16000 PF00534 Glycosyl transferases group 1 EQK04_16005 PF02719 Polysaccharide biosynthesis protein EQK04_16010 PF13614 AAA domain EQK04_16015 PF02706 Chain length determinant protein EQK04_16020 PF08671 Anti-repressor SinI EQK04_16020 PF01381 Helix-turn-helix EQK04_16030 PF01497 Periplasmic binding protein EQK04_16035 PF01032 FecCD transport family EQK04_16040 PF01032 FecCD transport family EQK04_16045 PF01522 Polysaccharide deacetylase EQK04_16045 PF13739 Deacetylase PdaC EQK04_16045 PF11738 Protein of unknown function (DUF3298) EQK04_16055 PF00005 ABC transporter EQK04_16055 PF08352 Oligopeptide/dipeptide transporter, C-terminal region EQK04_16060 PF00005 ABC transporter EQK04_16065 PF12911 N-terminal TM domain of oligopeptide transport permease C EQK04_16065 PF00528 Binding-protein-dependent transport system inner membrane component EQK04_16070 PF00528 Binding-protein-dependent transport system inner membrane component EQK04_16075 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle EQK04_16085 PF00201 UDP-glucoronosyl and UDP-glucosyl transferase EQK04_16105 PF00574 Clp protease EQK04_16110 PF03641 Possible lysine decarboxylase EQK04_16115 PF03819 MazG nucleotide pyrophosphohydrolase domain EQK04_16120 PF00916 Sulfate permease family EQK04_16120 PF01740 STAS domain EQK04_16125 PF00484 Carbonic anhydrase EQK04_16130 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain EQK04_16130 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain EQK04_16135 PF00545 ribonuclease EQK04_16145 PF00797 N-acetyltransferase EQK04_16150 PF00381 PTS HPr component phosphorylation site EQK04_16155 PF10298 WhiA N-terminal LAGLIDADG-like domain EQK04_16155 PF14527 WhiA LAGLIDADG-like domain EQK04_16155 PF02650 WhiA C-terminal HTH domain EQK04_16160 PF01933 Uncharacterised protein family UPF0052 EQK04_16165 PF03668 P-loop ATPase protein family EQK04_16170 PF00293 NUDIX domain EQK04_16175 PF07992 Pyridine nucleotide-disulphide oxidoreductase EQK04_16180 PF00877 NlpC/P60 family EQK04_16190 PF01503 Phosphoribosyl-ATP pyrophosphohydrolase EQK04_16190 PF01502 Phosphoribosyl-AMP cyclohydrolase EQK04_16195 PF00977 Histidine biosynthesis protein EQK04_16200 PF00977 Histidine biosynthesis protein EQK04_16205 PF00117 Glutamine amidotransferase class-I EQK04_16210 PF00475 Imidazoleglycerol-phosphate dehydratase EQK04_16215 PF00815 Histidinol dehydrogenase EQK04_16220 PF01634 ATP phosphoribosyltransferase EQK04_16225 PF13393 Histidyl-tRNA synthetase EQK04_16230 PF13529 Peptidase_C39 like family EQK04_16240 PF13460 NAD(P)H-binding EQK04_16245 PF02082 Transcriptional regulator EQK04_16250 PF14602 Hexapeptide repeat of succinyl-transferase EQK04_16255 PF13419 Haloacid dehalogenase-like hydrolase EQK04_16260 PF07670 Nucleoside recognition EQK04_16265 PF01790 Prolipoprotein diacylglyceryl transferase EQK04_16270 PF02603 HPr Serine kinase N terminus EQK04_16270 PF07475 HPr Serine kinase C-terminal domain EQK04_16275 PF01979 Amidohydrolase family EQK04_16280 PF01182 Glucosamine-6-phosphate isomerases/6-phosphogluconolactonase EQK04_16285 PF00392 Bacterial regulatory proteins, gntR family EQK04_16285 PF07702 UTRA domain EQK04_16290 PF00149 Calcineurin-like phosphoesterase EQK04_16295 PF04020 Mycobacterial 4 TMS phage holin, superfamily IV EQK04_16300 PF04024 PspC domain EQK04_16305 PF13349 Putative adhesin EQK04_16320 PF00005 ABC transporter EQK04_16320 PF17755 UvrA DNA-binding domain EQK04_16320 PF17760 UvrA interaction domain EQK04_16325 PF17757 UvrB interaction domain EQK04_16325 PF02151 UvrB/uvrC motif EQK04_16325 PF00271 Helicase conserved C-terminal domain EQK04_16325 PF12344 Ultra-violet resistance protein B EQK04_16325 PF04851 Type III restriction enzyme, res subunit EQK04_16330 PF09964 Uncharacterized protein conserved in bacteria (DUF2198) EQK04_16335 PF00391 PEP-utilising enzyme, mobile domain EQK04_16335 PF01326 Pyruvate phosphate dikinase, PEP/pyruvate binding domain EQK04_16340 PF00440 Bacterial regulatory proteins, tetR family EQK04_16345 PF07690 Major Facilitator Superfamily EQK04_16355 PF00486 Transcriptional regulatory protein, C terminal EQK04_16355 PF00072 Response regulator receiver domain EQK04_16360 PF00512 His Kinase A (phospho-acceptor) domain EQK04_16360 PF18698 Histidine kinase sensor domain EQK04_16360 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase EQK04_16360 PF00672 HAMP domain EQK04_16360 PF00989 PAS fold EQK04_16365 PF13231 Dolichyl-phosphate-mannose-protein mannosyltransferase EQK04_16370 PF00535 Glycosyl transferase family 2 EQK04_16375 PF00324 Amino acid permease EQK04_16380 PF00881 Nitroreductase family EQK04_16385 PF01638 HxlR-like helix-turn-helix EQK04_16390 PF17820 PDZ domain EQK04_16395 PF17423 Swarming motility protein EQK04_16400 PF17820 PDZ domain EQK04_16400 PF01471 Putative peptidoglycan binding domain EQK04_16400 PF03572 Peptidase family S41 EQK04_16405 PF01925 Sulfite exporter TauE/SafE EQK04_16410 PF00877 NlpC/P60 family EQK04_16415 PF18075 FtsX extracellular domain EQK04_16415 PF02687 FtsX-like permease family EQK04_16420 PF00005 ABC transporter EQK04_16425 PF13442 Cytochrome C oxidase, cbb3-type, subunit III EQK04_16430 PF10035 Uncharacterized protein conserved in bacteria (DUF2179) EQK04_16430 PF02588 Uncharacterised 5xTM membrane BCR, YitT family COG1284 EQK04_16450 PF02810 SEC-C motif EQK04_16450 PF07517 SecA DEAD-like domain EQK04_16450 PF01043 SecA preprotein cross-linking domain EQK04_16450 PF07516 SecA Wing and Scaffold domain EQK04_16455 PF02482 Sigma 54 modulation protein / S30EA ribosomal protein EQK04_16455 PF16321 Sigma 54 modulation/S30EA ribosomal protein C terminus EQK04_16460 PF00672 HAMP domain EQK04_16460 PF02743 Cache domain EQK04_16460 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain EQK04_16475 PF02561 Flagellar protein FliS EQK04_16480 PF07196 Flagellin hook IN motif EQK04_16480 PF02465 Flagellar hook-associated protein 2 N-terminus EQK04_16480 PF07195 Flagellar hook-associated protein 2 C-terminus EQK04_16485 PF03646 FlaG protein EQK04_16490 PF02599 Global regulator protein family EQK04_16495 PF02623 FliW protein EQK04_16505 PF00700 Bacterial flagellin C-terminal helical region EQK04_16505 PF00669 Bacterial flagellin N-terminal helical region EQK04_16510 PF06429 Flagellar basal body rod FlgEFG protein C-terminal EQK04_16510 PF00460 Flagella basal body rod protein EQK04_16515 PF05130 FlgN protein EQK04_16535 PF10719 Late competence development protein ComFB EQK04_16540 PF00271 Helicase conserved C-terminal domain EQK04_16540 PF04851 Type III restriction enzyme, res subunit EQK04_16545 PF02645 Uncharacterised protein, DegV family COG1307 EQK04_16550 PF00196 Bacterial regulatory proteins, luxR family EQK04_16550 PF00072 Response regulator receiver domain EQK04_16555 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase EQK04_16555 PF05384 Sensor protein DegS EQK04_16555 PF07730 Histidine kinase EQK04_16560 PF09186 Domain of unknown function (DUF1949) EQK04_16560 PF01205 Uncharacterized protein family UPF0029 EQK04_16565 PF03816 Cell envelope-related transcriptional attenuator domain EQK04_16570 PF00953 Glycosyl transferase family 4 EQK04_16580 PF00535 Glycosyl transferase family 2 EQK04_16585 PF02706 Chain length determinant protein EQK04_16590 PF04932 O-Antigen ligase EQK04_16595 PF16363 GDP-mannose 4,6 dehydratase EQK04_16600 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain EQK04_16600 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain EQK04_16600 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain EQK04_16605 PF00534 Glycosyl transferases group 1 EQK04_16605 PF13439 Glycosyltransferase Family 4 EQK04_16610 PF14667 Polysaccharide biosynthesis C-terminal domain EQK04_16610 PF01943 Polysaccharide biosynthesis protein EQK04_16615 PF02397 Bacterial sugar transferase EQK04_16625 PF04122 Putative cell wall binding repeat 2 EQK04_16625 PF01520 N-acetylmuramoyl-L-alanine amidase EQK04_16630 PF01520 N-acetylmuramoyl-L-alanine amidase EQK04_16630 PF04122 Putative cell wall binding repeat 2 EQK04_16635 PF04122 Putative cell wall binding repeat 2 EQK04_16635 PF08486 Stage II sporulation protein EQK04_16645 PF03816 Cell envelope-related transcriptional attenuator domain EQK04_16650 PF02350 UDP-N-acetylglucosamine 2-epimerase EQK04_16655 PF00483 Nucleotidyl transferase EQK04_16660 PF00005 ABC transporter EQK04_16665 PF01061 ABC-2 type transporter EQK04_16670 PF04464 CDP-Glycerol:Poly(glycerophosphate) glycerophosphotransferase EQK04_16670 PF00535 Glycosyl transferase family 2 EQK04_16675 PF04464 CDP-Glycerol:Poly(glycerophosphate) glycerophosphotransferase EQK04_16685 PF01467 Cytidylyltransferase-like EQK04_16690 PF03808 Glycosyl transferase WecB/TagA/CpsF family EQK04_16695 PF04464 CDP-Glycerol:Poly(glycerophosphate) glycerophosphotransferase EQK04_16700 PF05036 Sporulation related domain EQK04_16700 PF01832 Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase EQK04_16700 PF08239 Bacterial SH3 domain EQK04_16705 PF01238 Phosphomannose isomerase type I EQK04_16710 PF00528 Binding-protein-dependent transport system inner membrane component EQK04_16715 PF00528 Binding-protein-dependent transport system inner membrane component EQK04_16720 PF01547 Bacterial extracellular solute-binding protein EQK04_16725 PF00072 Response regulator receiver domain EQK04_16725 PF00196 Bacterial regulatory proteins, luxR family EQK04_16730 PF02743 Cache domain EQK04_16730 PF06580 Histidine kinase EQK04_16730 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase EQK04_16730 PF00672 HAMP domain EQK04_16740 PF00583 Acetyltransferase (GNAT) family EQK04_16745 PF01081 KDPG and KHG aldolase EQK04_16750 PF00294 pfkB family carbohydrate kinase EQK04_16755 PF00356 Bacterial regulatory proteins, lacI family EQK04_16760 PF04962 KduI/IolB family EQK04_16770 PF03323 Bacillus/Clostridium GerA spore germination protein EQK04_16775 PF03845 Spore germination protein EQK04_16780 PF05504 Spore germination B3/ GerAC like, C-terminal EQK04_16785 PF00535 Glycosyl transferase family 2 EQK04_16785 PF00534 Glycosyl transferases group 1 EQK04_16790 PF00083 Sugar (and other) transporter EQK04_16795 PF03816 Cell envelope-related transcriptional attenuator domain EQK04_16805 PF00877 NlpC/P60 family EQK04_16810 PF09587 Bacterial capsule synthesis protein PGA_cap EQK04_16815 PF14102 Capsule biosynthesis CapC EQK04_16820 PF08245 Mur ligase middle domain EQK04_16825 PF03323 Bacillus/Clostridium GerA spore germination protein EQK04_16835 PF05504 Spore germination B3/ GerAC like, C-terminal EQK04_16840 PF00356 Bacterial regulatory proteins, lacI family EQK04_16845 PF00294 pfkB family carbohydrate kinase EQK04_16850 PF05025 RbsD / FucU transport protein family EQK04_16855 PF00005 ABC transporter EQK04_16860 PF02653 Branched-chain amino acid transport system / permease component EQK04_16865 PF13407 Periplasmic binding protein domain EQK04_16870 PF01613 Flavin reductase like domain EQK04_16875 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family EQK04_16875 PF03466 LysR substrate binding domain EQK04_16880 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain EQK04_16880 PF00205 Thiamine pyrophosphate enzyme, central domain EQK04_16880 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain EQK04_16885 PF03306 Alpha-acetolactate decarboxylase EQK04_16890 PF01037 Lrp/AsnC ligand binding domain EQK04_16890 PF13404 AsnC-type helix-turn-helix domain EQK04_16895 PF02417 Chromate transporter EQK04_16900 PF02417 Chromate transporter EQK04_16905 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain EQK04_16905 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain EQK04_16905 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain EQK04_16910 PF04434 SWIM zinc finger EQK04_16915 PF00176 SNF2 family N-terminal domain EQK04_16915 PF00271 Helicase conserved C-terminal domain EQK04_16915 PF12419 SNF2 Helicase protein EQK04_16920 PF13426 PAS domain EQK04_16920 PF01740 STAS domain EQK04_16935 PF14183 YwpF-like protein EQK04_16940 PF01741 Large-conductance mechanosensitive channel, MscL EQK04_16945 PF07977 FabA-like domain EQK04_16950 PF18801 response regulator aspartate phosphatase H, N terminal EQK04_16955 PF00460 Flagella basal body rod protein EQK04_16955 PF06429 Flagellar basal body rod FlgEFG protein C-terminal EQK04_16960 PF00460 Flagella basal body rod protein EQK04_16960 PF06429 Flagellar basal body rod FlgEFG protein C-terminal EQK04_16970 PF12116 Stage III sporulation protein D EQK04_16975 PF01047 MarR family EQK04_16980 PF07690 Major Facilitator Superfamily EQK04_16985 PF01569 PAP2 superfamily EQK04_16990 PF07690 Major Facilitator Superfamily EQK04_16995 PF00497 Bacterial extracellular solute-binding proteins, family 3 EQK04_17000 PF00528 Binding-protein-dependent transport system inner membrane component EQK04_17005 PF00005 ABC transporter EQK04_17010 PF00909 Ammonium Transporter Family EQK04_17015 PF00543 Nitrogen regulatory protein P-II EQK04_17020 PF01551 Peptidase family M23 EQK04_17025 PF00583 Acetyltransferase (GNAT) family EQK04_17045 PF00005 ABC transporter EQK04_17070 PF00471 Ribosomal protein L33 EQK04_17075 PF07683 Cobalamin synthesis protein cobW C-terminal domain EQK04_17075 PF02492 CobW/HypB/UreG, nucleotide-binding domain EQK04_17080 PF00253 Ribosomal protein S14p/S29e EQK04_17085 PF06463 Molybdenum Cofactor Synthesis C EQK04_17085 PF04055 Radical SAM superfamily EQK04_17090 PF02634 FdhD/NarQ family EQK04_17095 PF07690 Major Facilitator Superfamily EQK04_17100 PF01568 Molydopterin dinucleotide binding domain EQK04_17100 PF00384 Molybdopterin oxidoreductase EQK04_17100 PF18364 Molybdopterin oxidoreductase N-terminal domain EQK04_17105 PF00092 von Willebrand factor type A domain EQK04_17110 PF00092 von Willebrand factor type A domain EQK04_17115 PF08486 Stage II sporulation protein EQK04_17120 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) EQK04_17125 PF08680 TATA-box binding EQK04_17130 PF06612 Protein of unknown function (DUF1146) EQK04_17140 PF02823 ATP synthase, Delta/Epsilon chain, beta-sandwich domain EQK04_17140 PF00401 ATP synthase, Delta/Epsilon chain, long alpha-helix domain EQK04_17145 PF02874 ATP synthase alpha/beta family, beta-barrel domain EQK04_17145 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain EQK04_17150 PF00231 ATP synthase EQK04_17155 PF00306 ATP synthase alpha/beta chain, C terminal domain EQK04_17155 PF02874 ATP synthase alpha/beta family, beta-barrel domain EQK04_17155 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain EQK04_17160 PF00213 ATP synthase delta (OSCP) subunit EQK04_17165 PF00430 ATP synthase B/B' CF(0) EQK04_17170 PF00137 ATP synthase subunit C EQK04_17175 PF00119 ATP synthase A chain EQK04_17180 PF03899 ATP synthase I chain EQK04_17190 PF00464 Serine hydroxymethyltransferase EQK04_17195 PF04260 Protein of unknown function (DUF436) EQK04_17200 PF02502 Ribose/Galactose Isomerase EQK04_17205 PF01451 Low molecular weight phosphotyrosine protein phosphatase EQK04_17210 PF02659 Putative manganese efflux pump EQK04_17215 PF03481 Putative GTP-binding controlling metal-binding EQK04_17215 PF01300 Telomere recombination EQK04_17225 PF09551 Stage II sporulation protein R (spore_II_R) EQK04_17235 PF05175 Methyltransferase small domain EQK04_17235 PF17827 PrmC N-terminal domain EQK04_17240 PF00472 RF-1 domain EQK04_17240 PF03462 PCRF domain EQK04_17245 PF13411 MerR HTH family regulatory protein EQK04_17250 PF03547 Membrane transport protein EQK04_17255 PF00390 Malic enzyme, N-terminal domain EQK04_17255 PF03949 Malic enzyme, NAD binding domain EQK04_17260 PF00265 Thymidine kinase EQK04_17265 PF01197 Ribosomal protein L31 EQK04_17270 PF07498 Rho termination factor, N-terminal domain EQK04_17270 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain EQK04_17270 PF07497 Rho termination factor, RNA-binding domain EQK04_17275 PF03320 Bacterial fructose-1,6-bisphosphatase, glpX-encoded EQK04_17280 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) EQK04_17285 PF00923 Transaldolase/Fructose-6-phosphate aldolase EQK04_17290 PF01116 Fructose-bisphosphate aldolase class-II EQK04_17295 PF00072 Response regulator receiver domain EQK04_17300 PF10740 Domain of unknown function (DUF2529) EQK04_17305 PF00117 Glutamine amidotransferase class-I EQK04_17305 PF06418 CTP synthase N-terminus EQK04_17310 PF05066 HB1, ASXL, restriction endonuclease HTH domain EQK04_17325 PF02771 Acyl-CoA dehydrogenase, N-terminal domain EQK04_17325 PF02770 Acyl-CoA dehydrogenase, middle domain EQK04_17325 PF00441 Acyl-CoA dehydrogenase, C-terminal domain EQK04_17330 PF02770 Acyl-CoA dehydrogenase, middle domain EQK04_17330 PF00441 Acyl-CoA dehydrogenase, C-terminal domain EQK04_17330 PF02771 Acyl-CoA dehydrogenase, N-terminal domain EQK04_17335 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain EQK04_17335 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain EQK04_17340 PF00108 Thiolase, N-terminal domain EQK04_17340 PF02803 Thiolase, C-terminal domain EQK04_17345 PF13183 4Fe-4S dicluster domain EQK04_17345 PF02754 Cysteine-rich domain EQK04_17350 PF13091 PLD-like domain EQK04_17355 PF03851 UV-endonuclease UvdE EQK04_17365 PF17676 LD-carboxypeptidase C-terminal domain EQK04_17365 PF02016 LD-carboxypeptidase N-terminal domain EQK04_17375 PF00005 ABC transporter EQK04_17375 PF00664 ABC transporter transmembrane region EQK04_17380 PF13396 Phospholipase_D-nuclease N-terminal EQK04_17380 PF13091 PLD-like domain EQK04_17385 PF17676 LD-carboxypeptidase C-terminal domain EQK04_17385 PF02016 LD-carboxypeptidase N-terminal domain EQK04_17390 PF00750 tRNA synthetases class I (R) EQK04_17390 PF03485 Arginyl tRNA synthetase N terminal domain EQK04_17390 PF05746 DALR anticodon binding domain EQK04_17395 PF09148 Domain of unknown function (DUF1934) EQK04_17405 PF00491 Arginase family EQK04_17410 PF17284 Spermidine synthase tetramerisation domain EQK04_17415 PF00912 Transglycosylase EQK04_17415 PF00905 Penicillin binding protein transpeptidase domain EQK04_17420 PF08741 YwhD family EQK04_17425 PF02163 Peptidase family M50 EQK04_17430 PF01361 Tautomerase enzyme EQK04_17440 PF00296 Luciferase-like monooxygenase EQK04_17445 PF03466 LysR substrate binding domain EQK04_17445 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family EQK04_17450 PF03358 NADPH-dependent FMN reductase EQK04_17455 PF00296 Luciferase-like monooxygenase EQK04_17460 PF00462 Glutaredoxin EQK04_17465 PF00583 Acetyltransferase (GNAT) family EQK04_17470 PF00528 Binding-protein-dependent transport system inner membrane component EQK04_17480 PF00528 Binding-protein-dependent transport system inner membrane component EQK04_17485 PF00005 ABC transporter EQK04_17495 PF01966 HD domain EQK04_17500 PF07293 Protein of unknown function (DUF1450) EQK04_17515 PF00535 Glycosyl transferase family 2 EQK04_17515 PF07238 PilZ domain EQK04_17525 PF03099 Biotin/lipoate A/B protein ligase family EQK04_17550 PF14449 Pre-toxin TG EQK04_17550 PF04740 LXG domain of WXG superfamily EQK04_17580 PF03737 Aldolase/RraA EQK04_17590 PF01515 Phosphate acetyl/butaryl transferase EQK04_17600 PF07690 Major Facilitator Superfamily EQK04_17605 PF01037 Lrp/AsnC ligand binding domain EQK04_17610 PF07690 Major Facilitator Superfamily EQK04_17620 PF07883 Cupin domain EQK04_17635 PF00155 Aminotransferase class I and II EQK04_17645 PF00908 dTDP-4-dehydrorhamnose 3,5-epimerase EQK04_17650 PF04321 RmlD substrate binding domain EQK04_17655 PF16363 GDP-mannose 4,6 dehydratase EQK04_17660 PF00483 Nucleotidyl transferase EQK04_17665 PF04101 Glycosyltransferase family 28 C-terminal domain EQK04_17670 PF02348 Cytidylyltransferase EQK04_17675 PF08666 SAF domain EQK04_17675 PF03102 NeuB family EQK04_17680 PF00583 Acetyltransferase (GNAT) family EQK04_17685 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family EQK04_17690 PF04464 CDP-Glycerol:Poly(glycerophosphate) glycerophosphotransferase EQK04_17695 PF00535 Glycosyl transferase family 2 EQK04_17705 PF09671 Spore coat protein (Spore_GerQ) EQK04_17715 PF04241 Protein of unknown function (DUF423) EQK04_17720 PF00860 Permease family EQK04_17725 PF17261 Family of unknown function (DUF5327) EQK04_17730 PF00171 Aldehyde dehydrogenase family EQK04_17735 PF03167 Uracil DNA glycosylase superfamily EQK04_17740 PF00535 Glycosyl transferase family 2 EQK04_17750 PF08543 Phosphomethylpyrimidine kinase EQK04_17765 PF00251 Glycosyl hydrolases family 32 N-terminal domain EQK04_17765 PF08244 Glycosyl hydrolases family 32 C terminal EQK04_17770 PF00367 phosphotransferase system, EIIB EQK04_17770 PF02378 Phosphotransferase system, EIIC EQK04_17775 PF00874 PRD domain EQK04_17775 PF03123 CAT RNA binding domain EQK04_17785 PF00082 Subtilase family EQK04_17785 PF13860 FlgD Ig-like domain EQK04_17785 PF05922 Peptidase inhibitor I9 EQK04_17785 PF02225 PA domain EQK04_17795 PF00296 Luciferase-like monooxygenase EQK04_17800 PF00881 Nitroreductase family EQK04_17805 PF01098 Cell cycle protein EQK04_17810 PF17368 Spore morphogenesis and germination YwcE EQK04_17815 PF03626 Prokaryotic Cytochrome C oxidase subunit IV EQK04_17820 PF00510 Cytochrome c oxidase subunit III EQK04_17825 PF00115 Cytochrome C and Quinol oxidase polypeptide I EQK04_17830 PF02790 Cytochrome C oxidase subunit II, transmembrane domain EQK04_17830 PF00116 Cytochrome C oxidase subunit II, periplasmic domain EQK04_17840 PF02744 Galactose-1-phosphate uridyl transferase, C-terminal domain EQK04_17840 PF01087 Galactose-1-phosphate uridyl transferase, N-terminal domain EQK04_17845 PF16363 GDP-mannose 4,6 dehydratase EQK04_17850 PF10509 Galactokinase galactose-binding signature EQK04_17850 PF08544 GHMP kinases C terminal EQK04_17850 PF00288 GHMP kinases N terminal domain EQK04_17865 PF04138 GtrA-like protein EQK04_17895 PF13181 Tetratricopeptide repeat EQK04_17895 PF18801 response regulator aspartate phosphatase H, N terminal EQK04_17910 PF04341 Protein of unknown function, DUF485 EQK04_17915 PF00474 Sodium:solute symporter family EQK04_17935 PF02581 Thiamine monophosphate synthase EQK04_17940 PF02110 Hydroxyethylthiazole kinase family EQK04_17945 PF03466 LysR substrate binding domain EQK04_17945 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family EQK04_17950 PF03788 LrgA family EQK04_17955 PF04172 LrgB-like family EQK04_17960 PF17785 PUA-like domain EQK04_17960 PF10672 S-adenosylmethionine-dependent methyltransferase EQK04_17965 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily EQK04_17970 PF00005 ABC transporter EQK04_17975 PF00528 Binding-protein-dependent transport system inner membrane component EQK04_17980 PF00497 Bacterial extracellular solute-binding proteins, family 3 EQK04_17985 PF18801 response regulator aspartate phosphatase H, N terminal EQK04_17990 PF04607 Region found in RelA / SpoT proteins EQK04_17995 PF02653 Branched-chain amino acid transport system / permease component EQK04_18000 PF00005 ABC transporter EQK04_18005 PF13407 Periplasmic binding protein domain EQK04_18010 PF13229 Right handed beta helix region EQK04_18015 PF01063 Amino-transferase class IV EQK04_18030 PF11975 Family 4 glycosyl hydrolase C-terminal domain EQK04_18030 PF02056 Family 4 glycosyl hydrolase EQK04_18035 PF02255 PTS system, Lactose/Cellobiose specific IIA subunit EQK04_18040 PF02378 Phosphotransferase system, EIIC EQK04_18045 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit EQK04_18050 PF05043 Mga helix-turn-helix domain EQK04_18050 PF00874 PRD domain EQK04_18050 PF08279 HTH domain EQK04_18050 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 EQK04_18065 PF00208 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase EQK04_18065 PF02812 Glu/Leu/Phe/Val dehydrogenase, dimerisation domain EQK04_18080 PF08281 Sigma-70, region 4 EQK04_18080 PF04542 Sigma-70 region 2 EQK04_18085 PF00544 Pectate lyase EQK04_18090 PF00005 ABC transporter EQK04_18090 PF00664 ABC transporter transmembrane region EQK04_18095 PF00005 ABC transporter EQK04_18095 PF00664 ABC transporter transmembrane region EQK04_18100 PF02322 Cytochrome bd terminal oxidase subunit II EQK04_18105 PF01654 Cytochrome bd terminal oxidase subunit I EQK04_18110 PF00005 ABC transporter EQK04_18115 PF01032 FecCD transport family EQK04_18120 PF01497 Periplasmic binding protein EQK04_18125 PF04203 Sortase domain EQK04_18130 PF00005 ABC transporter EQK04_18135 PF01032 FecCD transport family EQK04_18140 PF01497 Periplasmic binding protein EQK04_18150 PF05031 Iron Transport-associated domain EQK04_18155 PF05031 Iron Transport-associated domain EQK04_18160 PF01638 HxlR-like helix-turn-helix EQK04_18165 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily EQK04_18170 PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase EQK04_18170 PF00925 GTP cyclohydrolase II EQK04_18175 PF01872 RibD C-terminal domain EQK04_18175 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region EQK04_18185 PF01522 Polysaccharide deacetylase EQK04_18190 PF02255 PTS system, Lactose/Cellobiose specific IIA subunit EQK04_18195 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit EQK04_18200 PF00232 Glycosyl hydrolase family 1 EQK04_18210 PF02378 Phosphotransferase system, EIIC EQK04_18215 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 EQK04_18215 PF00874 PRD domain EQK04_18215 PF08279 HTH domain EQK04_18215 PF05043 Mga helix-turn-helix domain EQK04_18240 PF03553 Na+/H+ antiporter family EQK04_18245 PF10415 Fumarase C C-terminus EQK04_18245 PF00206 Lyase EQK04_18250 PF00710 Asparaginase, N-terminal EQK04_18250 PF17763 Glutaminase/Asparaginase C-terminal domain EQK04_18255 PF01381 Helix-turn-helix EQK04_18265 PF17353 Family of unknown function (DUF5381) EQK04_18280 PF06013 Proteins of 100 residues with WXG EQK04_18285 PF01546 Peptidase family M20/M25/M40 EQK04_18285 PF07687 Peptidase dimerisation domain EQK04_18300 PF01380 SIS domain EQK04_18300 PF01418 Helix-turn-helix domain, rpiR family EQK04_18305 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase EQK04_18305 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase EQK04_18315 PF02447 GntP family permease EQK04_18320 PF01717 Cobalamin-independent synthase, Catalytic domain EQK04_18345 PF00232 Glycosyl hydrolase family 1 EQK04_18350 PF02378 Phosphotransferase system, EIIC EQK04_18350 PF00367 phosphotransferase system, EIIB EQK04_18350 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 EQK04_18355 PF00874 PRD domain EQK04_18355 PF03123 CAT RNA binding domain EQK04_18360 PF09234 Domain of unknown function (DUF1963) EQK04_18370 PF02361 Cobalt transport protein EQK04_18375 PF00005 ABC transporter EQK04_18380 PF09819 ABC-type cobalt transport system, permease component EQK04_18385 PF03070 TENA/THI-4/PQQC family EQK04_18415 PF05547 Immune inhibitor A peptidase M6 EQK04_18415 PF00801 PKD domain EQK04_18420 PF03992 Antibiotic biosynthesis monooxygenase EQK04_18425 PF00881 Nitroreductase family EQK04_18430 PF01047 MarR family EQK04_18435 PF00591 Glycosyl transferase family, a/b domain EQK04_18435 PF07831 Pyrimidine nucleoside phosphorylase C-terminal domain EQK04_18435 PF02885 Glycosyl transferase family, helical bundle domain EQK04_18440 PF07662 Na+ dependent nucleoside transporter C-terminus EQK04_18440 PF01773 Na+ dependent nucleoside transporter N-terminus EQK04_18445 PF01791 DeoC/LacD family aldolase EQK04_18450 PF04198 Putative sugar-binding domain EQK04_18460 PF01757 Acyltransferase family EQK04_18465 PF07690 Major Facilitator Superfamily EQK04_18470 PF01488 Shikimate / quinate 5-dehydrogenase EQK04_18470 PF05201 Glutamyl-tRNAGlu reductase, N-terminal domain EQK04_18470 PF00745 Glutamyl-tRNAGlu reductase, dimerisation domain EQK04_18475 PF13649 Methyltransferase domain EQK04_18480 PF00196 Bacterial regulatory proteins, luxR family EQK04_18480 PF00072 Response regulator receiver domain EQK04_18490 PF13411 MerR HTH family regulatory protein EQK04_18495 PF01408 Oxidoreductase family, NAD-binding Rossmann fold EQK04_18500 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain EQK04_18505 PF00324 Amino acid permease EQK04_18510 PF08713 DNA alkylation repair enzyme EQK04_18515 PF02447 GntP family permease EQK04_18520 PF02782 FGGY family of carbohydrate kinases, C-terminal domain EQK04_18520 PF00370 FGGY family of carbohydrate kinases, N-terminal domain EQK04_18525 PF01418 Helix-turn-helix domain, rpiR family EQK04_18525 PF01380 SIS domain EQK04_18530 PF01156 Inosine-uridine preferring nucleoside hydrolase EQK04_18565 PF03466 LysR substrate binding domain EQK04_18565 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family EQK04_18570 PF00356 Bacterial regulatory proteins, lacI family EQK04_18575 PF13416 Bacterial extracellular solute-binding protein EQK04_18580 PF00528 Binding-protein-dependent transport system inner membrane component EQK04_18585 PF00528 Binding-protein-dependent transport system inner membrane component EQK04_18590 PF07745 Glycosyl hydrolase family 53 EQK04_18595 PF02449 Beta-galactosidase EQK04_18595 PF08532 Beta-galactosidase trimerisation domain EQK04_18595 PF08533 Beta-galactosidase C-terminal domain EQK04_18600 PF03600 Citrate transporter EQK04_18610 PF12679 ABC-2 family transporter protein EQK04_18615 PF00005 ABC transporter EQK04_18620 PF08274 PhnA Zinc-Ribbon EQK04_18620 PF03831 PhnA domain EQK04_18625 PF02595 Glycerate kinase family EQK04_18630 PF02447 GntP family permease EQK04_18635 PF13556 PucR C-terminal helix-turn-helix domain EQK04_18635 PF05651 Putative sugar diacid recognition EQK04_18635 PF17853 GGDEF-like domain EQK04_18640 PF17922 Tetracyclin repressor-like, C-terminal domain EQK04_18640 PF00440 Bacterial regulatory proteins, tetR family EQK04_18655 PF00005 ABC transporter EQK04_18665 PF18801 response regulator aspartate phosphatase H, N terminal EQK04_18670 PF03123 CAT RNA binding domain EQK04_18670 PF00874 PRD domain EQK04_18675 PF00232 Glycosyl hydrolase family 1 EQK04_18680 PF02378 Phosphotransferase system, EIIC EQK04_18680 PF00367 phosphotransferase system, EIIB EQK04_18680 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 EQK04_18705 PF00293 NUDIX domain EQK04_18720 PF00324 Amino acid permease EQK04_18735 PF07690 Major Facilitator Superfamily EQK04_18740 PF18317 Shikimate 5'-dehydrogenase C-terminal domain EQK04_18740 PF08501 Shikimate dehydrogenase substrate binding domain EQK04_18745 PF07690 Major Facilitator Superfamily EQK04_18770 PF14410 HNH/ENDO VII superfamily nuclease with conserved GHE residues EQK04_18770 PF14449 Pre-toxin TG EQK04_18770 PF04740 LXG domain of WXG superfamily EQK04_18785 PF00232 Glycosyl hydrolase family 1 EQK04_18790 PF00367 phosphotransferase system, EIIB EQK04_18790 PF02378 Phosphotransferase system, EIIC EQK04_18790 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 EQK04_18795 PF00392 Bacterial regulatory proteins, gntR family EQK04_18795 PF07702 UTRA domain EQK04_18810 PF02567 Phenazine biosynthesis-like protein EQK04_18815 PF03466 LysR substrate binding domain EQK04_18815 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family EQK04_18835 PF13545 Crp-like helix-turn-helix domain EQK04_18835 PF00027 Cyclic nucleotide-binding domain EQK04_18840 PF00753 Metallo-beta-lactamase superfamily EQK04_18840 PF16123 Hydroxyacylglutathione hydrolase C-terminus EQK04_18865 PF13361 UvrD-like helicase C-terminal domain EQK04_18865 PF00580 UvrD/REP helicase N-terminal domain EQK04_18870 PF12462 DNA helicase IV / RNA helicase N terminal EQK04_18870 PF13361 UvrD-like helicase C-terminal domain EQK04_18870 PF00580 UvrD/REP helicase N-terminal domain EQK04_18880 PF02590 Predicted SPOUT methyltransferase EQK04_18885 PF14116 YyzF-like protein EQK04_18890 PF02361 Cobalt transport protein EQK04_18895 PF12558 ATP-binding cassette cobalt transporter EQK04_18895 PF00005 ABC transporter EQK04_18900 PF07155 ECF-type riboflavin transporter, S component EQK04_18915 PF00005 ABC transporter EQK04_18920 PF00583 Acetyltransferase (GNAT) family EQK04_18925 PF13180 PDZ domain EQK04_18930 PF00753 Metallo-beta-lactamase superfamily EQK04_18935 PF09648 YycH protein EQK04_18940 PF07435 YycH protein EQK04_18945 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase EQK04_18945 PF00672 HAMP domain EQK04_18945 PF00512 His Kinase A (phospho-acceptor) domain EQK04_18945 PF13426 PAS domain EQK04_18950 PF00486 Transcriptional regulatory protein, C terminal EQK04_18950 PF00072 Response regulator receiver domain EQK04_18975 PF00578 AhpC/TSA family EQK04_18985 PF04235 Protein of unknown function (DUF418) EQK04_18990 PF00709 Adenylosuccinate synthetase EQK04_18995 PF00440 Bacterial regulatory proteins, tetR family EQK04_19000 PF00067 Cytochrome P450 EQK04_19005 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily EQK04_19010 PF00772 DnaB-like helicase N terminal domain EQK04_19010 PF03796 DnaB-like helicase C terminal domain EQK04_19015 PF16226 Domain of unknown function (DUF4885) EQK04_19025 PF00756 Putative esterase EQK04_19030 PF12833 Helix-turn-helix domain EQK04_19030 PF01497 Periplasmic binding protein EQK04_19035 PF01497 Periplasmic binding protein EQK04_19040 PF00756 Putative esterase EQK04_19045 PF14174 YycC-like protein EQK04_19050 PF07690 Major Facilitator Superfamily EQK04_19055 PF01281 Ribosomal protein L9, N-terminal domain EQK04_19055 PF03948 Ribosomal protein L9, C-terminal domain EQK04_19060 PF02272 DHHA1 domain EQK04_19060 PF01368 DHH family EQK04_19065 PF09991 Predicted membrane protein (DUF2232) EQK04_19070 PF01368 DHH family EQK04_19070 PF02833 DHHA2 domain EQK04_19075 PF11738 Protein of unknown function (DUF3298) EQK04_19075 PF13739 Deacetylase PdaC EQK04_19080 PF04542 Sigma-70 region 2 EQK04_19080 PF08281 Sigma-70, region 4 EQK04_19090 PF00199 Catalase EQK04_19090 PF06628 Catalase-related immune-responsive EQK04_19095 PF03358 NADPH-dependent FMN reductase EQK04_19100 PF01738 Dienelactone hydrolase family EQK04_19105 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily EQK04_19110 PF00528 Binding-protein-dependent transport system inner membrane component EQK04_19115 PF00005 ABC transporter EQK04_19115 PF00571 CBS domain EQK04_19120 PF01084 Ribosomal protein S18 EQK04_19125 PF00436 Single-strand binding protein family EQK04_19130 PF01250 Ribosomal protein S6 EQK04_19135 PF01926 50S ribosome-binding GTPase EQK04_19135 PF06071 Protein of unknown function (DUF933) EQK04_19140 PF06107 Bacterial protein of unknown function (DUF951) EQK04_19160 PF06866 Protein of unknown function (DUF1256) EQK04_19165 PF02195 ParB-like nuclease domain EQK04_19165 PF17762 HTH domain found in ParB protein EQK04_19170 PF13614 AAA domain EQK04_19180 PF17762 HTH domain found in ParB protein EQK04_19180 PF02195 ParB-like nuclease domain EQK04_19185 PF02527 rRNA small subunit methyltransferase G EQK04_19190 PF13932 GidA associated domain EQK04_19190 PF01134 Glucose inhibited division protein A EQK04_19195 PF12631 MnmE helical domain EQK04_19195 PF10396 GTP-binding protein TrmE N-terminus EQK04_19195 PF01926 50S ribosome-binding GTPase EQK04_19200 PF14804 Jag N-terminus EQK04_19200 PF01424 R3H domain EQK04_19205 PF02096 60Kd inner membrane protein EQK04_19210 PF00825 Ribonuclease P EQK04_19215 PF00468 Ribosomal protein L34 EQK04_19220 PF00308 Bacterial dnaA protein EQK04_19220 PF08299 Bacterial dnaA protein helix-turn-helix EQK04_19220 PF11638 DnaA N-terminal domain EQK04_19225 PF02767 DNA polymerase III beta subunit, central domain EQK04_19225 PF00712 DNA polymerase III beta subunit, N-terminal domain EQK04_19225 PF02768 DNA polymerase III beta subunit, C-terminal domain EQK04_19235 PF02463 RecF/RecN/SMC N terminal domain EQK04_19240 PF04025 Domain of unknown function (DUF370) EQK04_19245 PF01751 Toprim domain EQK04_19245 PF00204 DNA gyrase B EQK04_19245 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase EQK04_19245 PF00986 DNA gyrase B subunit, carboxyl terminus EQK04_19250 PF00521 DNA gyrase/topoisomerase IV, subunit A EQK04_19250 PF03989 DNA gyrase C-terminal domain, beta-propeller EQK04_19280 PF14175 YaaC-like Protein EQK04_19285 PF00571 CBS domain EQK04_19285 PF00478 IMP dehydrogenase / GMP reductase domain EQK04_19290 PF07943 Penicillin-binding protein 5, C-terminal domain EQK04_19290 PF00768 D-alanyl-D-alanine carboxypeptidase EQK04_19295 PF00392 Bacterial regulatory proteins, gntR family EQK04_19295 PF00155 Aminotransferase class I and II EQK04_19300 PF01680 SOR/SNZ family EQK04_19305 PF01174 SNO glutamine amidotransferase family EQK04_19310 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) EQK04_19310 PF02403 Seryl-tRNA synthetase N-terminal domain EQK04_19315 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain EQK04_19325 PF01712 Deoxynucleoside kinase EQK04_19330 PF01712 Deoxynucleoside kinase EQK04_19335 PF01476 LysM domain EQK04_19335 PF00704 Glycosyl hydrolases family 18 EQK04_19340 PF00857 Isochorismatase family EQK04_19345 PF14437 MafB19-like deaminase EQK04_19355 PF12169 DNA polymerase III subunits gamma and tau domain III EQK04_19360 PF02575 YbaB/EbfC DNA-binding family EQK04_19365 PF02132 RecR protein EQK04_19365 PF13662 Toprim domain EQK04_19370 PF10704 Protein of unknown function (DUF2508) EQK04_19375 PF07441 SigmaK-factor processing regulatory protein BofA