CFN77_00005 SM00382 ATPases associated with a variety of cellular activities CFN77_00005 SM00760 Bacterial dnaA protein helix-turn-helix domain CFN77_00010 SM00480 DNA polymerase III beta subunit CFN77_00030 SM00387 Histidine kinase-like ATPases CFN77_00030 SM00433 TopoisomeraseII CFN77_00035 SM00434 DNA Topoisomerase IV CFN77_00070 SM00116 Domain in cystathionine beta-synthase and other proteins. CFN77_00070 SM01240 CFN77_00070 CFN77_00075 SM00936 Penicillin-binding protein 5, C-terminal domain CFN77_00080 SM00345 helix_turn_helix gluconate operon transcriptional repressor CFN77_00100 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). CFN77_00120 SM00257 Lysin motif CFN77_00120 SM00636 CFN77_00120 CFN77_00140 SM00382 ATPases associated with a variety of cellular activities CFN77_00150 SM00493 CFN77_00150 CFN77_00245 SM00465 GIY-YIG type nucleases (URI domain) CFN77_00255 SM00966 SpoVT / AbrB like domain CFN77_00275 SM01208 CFN77_00275 CFN77_00280 SM00493 CFN77_00280 CFN77_00285 SM00650 Ribosomal RNA adenine dimethylases CFN77_00330 SM01400 CFN77_00330 CFN77_00350 SM00487 DEAD-like helicases superfamily CFN77_00350 SM00490 helicase superfamily c-terminal domain CFN77_00350 SM00982 CFN77_00350 CFN77_00350 SM01058 CarD-like/TRCF domain CFN77_00355 SM00966 SpoVT / AbrB like domain CFN77_00370 SM00363 S4 RNA-binding domain CFN77_00390 SM00316 Ribosomal protein S1-like RNA-binding domain CFN77_00405 SM00331 Sigma factor PP2C-like phosphatases CFN77_00405 SM00332 Serine/threonine phosphatases, family 2C, catalytic domain CFN77_00415 SM00220 Serine/Threonine protein kinases, catalytic domain CFN77_00420 SM00977 TilS substrate C-terminal domain CFN77_00430 SM00382 ATPases associated with a variety of cellular activities CFN77_00475 SM00905 Dihydroneopterin aldolase CFN77_00485 SM00530 Helix-turn-helix XRE-family like proteins CFN77_00590 SM00382 ATPases associated with a variety of cellular activities CFN77_00590 SM01086 C-terminal, D2-small domain, of ClpB protein CFN77_00595 SM00382 ATPases associated with a variety of cellular activities CFN77_00605 SM00670 Large family of predicted nucleotide-binding domains CFN77_00630 SM00840 CFN77_00630 CFN77_00635 SM00535 Ribonuclease III family CFN77_00640 SM00967 RNA 2'-O ribose methyltransferase substrate binding CFN77_00665 SM00738 In Spt5p, this domain may confer affinity for Spt4p. It possesses a RNP-like fold. CFN77_00665 SM00739 KOW (Kyprides, Ouzounis, Woese) motif. CFN77_00670 SM00649 Ribosomal protein L11/L12 CFN77_00700 SM00663 RNA polymerase I subunit A N-terminus CFN77_00720 SM00838 Elongation factor G C-terminus CFN77_00720 SM00889 Elongation factor G, domain IV CFN77_00735 SM01403 CFN77_00735 CFN77_00755 SM01382 CFN77_00755 CFN77_00755 SM01383 CFN77_00755 CFN77_00770 SM00322 K homology RNA-binding domain CFN77_00790 SM01374 CFN77_00790 CFN77_00795 SM00739 KOW (Kyprides, Ouzounis, Woese) motif. CFN77_00860 SM00316 Ribosomal protein S1-like RNA-binding domain CFN77_00880 SM00662 RNA polymerases D CFN77_00890 SM00382 ATPases associated with a variety of cellular activities CFN77_00895 SM00382 ATPases associated with a variety of cellular activities CFN77_00920 SM00387 Histidine kinase-like ATPases CFN77_00930 SM00507 HNH nucleases CFN77_00965 SM00646 CFN77_00965 CFN77_00980 SM01251 CFN77_00980 CFN77_01125 SM00382 ATPases associated with a variety of cellular activities CFN77_01135 SM00382 ATPases associated with a variety of cellular activities CFN77_01170 SM00345 helix_turn_helix gluconate operon transcriptional repressor CFN77_01175 SM00382 ATPases associated with a variety of cellular activities CFN77_01185 SM00530 Helix-turn-helix XRE-family like proteins CFN77_01255 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor CFN77_01280 SM00450 Rhodanese Homology Domain CFN77_01285 SM00450 Rhodanese Homology Domain CFN77_01290 SM00450 Rhodanese Homology Domain CFN77_01290 SM00849 Metallo-beta-lactamase superfamily CFN77_01325 SM00347 helix_turn_helix multiple antibiotic resistance protein CFN77_01355 SM00450 Rhodanese Homology Domain CFN77_01370 SM01061 CAT RNA binding domain CFN77_01405 SM00872 Alpha mannosidase, middle domain CFN77_01525 SM00347 helix_turn_helix multiple antibiotic resistance protein CFN77_01560 SM00387 Histidine kinase-like ATPases CFN77_01565 SM00448 cheY-homologous receiver domain CFN77_01595 SM00387 Histidine kinase-like ATPases CFN77_01600 SM00448 cheY-homologous receiver domain CFN77_01600 SM00850 LytTr DNA-binding domain CFN77_01605 SM00382 ATPases associated with a variety of cellular activities CFN77_01705 SM00116 Domain in cystathionine beta-synthase and other proteins. CFN77_01705 SM00382 ATPases associated with a variety of cellular activities CFN77_01750 SM00354 helix_turn _helix lactose operon repressor CFN77_01850 SM00346 helix_turn_helix isocitrate lyase regulation CFN77_01860 SM01130 CFN77_01860 CFN77_01865 SM00354 helix_turn _helix lactose operon repressor CFN77_01940 SM00062 Bacterial periplasmic substrate-binding proteins CFN77_01955 SM00344 helix_turn_helix ASNC type CFN77_01970 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). CFN77_01970 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain CFN77_01995 SM00382 ATPases associated with a variety of cellular activities CFN77_02010 SM00823 Phosphopantetheine attachment site CFN77_02015 SM00823 Phosphopantetheine attachment site CFN77_02025 SM00822 CFN77_02025 CFN77_02025 SM00823 Phosphopantetheine attachment site CFN77_02030 SM00822 CFN77_02030 CFN77_02030 SM00823 Phosphopantetheine attachment site CFN77_02035 SM00824 Thioesterase CFN77_02045 SM00345 helix_turn_helix gluconate operon transcriptional repressor CFN77_02055 SM00342 helix_turn_helix, arabinose operon control protein CFN77_02055 SM00871 Bacterial transcription activator, effector binding domain CFN77_02085 SM00382 ATPases associated with a variety of cellular activities CFN77_02095 SM00062 Bacterial periplasmic substrate-binding proteins CFN77_02130 SM00710 Parallel beta-helix repeats CFN77_02145 SM00062 Bacterial periplasmic substrate-binding proteins CFN77_02145 SM00079 Eukaryotic homologues of bacterial periplasmic substrate binding proteins. CFN77_02155 SM00382 ATPases associated with a variety of cellular activities CFN77_02175 SM00448 cheY-homologous receiver domain CFN77_02175 SM00862 Transcriptional regulatory protein, C terminal CFN77_02180 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain CFN77_02180 SM00387 Histidine kinase-like ATPases CFN77_02180 SM00388 His Kinase A (phosphoacceptor) domain CFN77_02185 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. CFN77_02210 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor CFN77_02225 SM00345 helix_turn_helix gluconate operon transcriptional repressor CFN77_02275 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). CFN77_02275 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain CFN77_02275 SM01049 CFN77_02275 CFN77_02290 SM00900 CFN77_02290 CFN77_02315 SM00894 Excalibur calcium-binding domain CFN77_02340 SM00796 Allophanate hydrolase subunit 1 CFN77_02345 SM00797 Allophanate hydrolase subunit 2 CFN77_02350 SM00346 helix_turn_helix isocitrate lyase regulation CFN77_02410 SM00436 Bacterial DNA topoisomeraes I ATP-binding domain CFN77_02410 SM00437 Bacterial DNA topoisomerase I DNA-binding domain CFN77_02410 SM00493 CFN77_02410 CFN77_02420 SM00267 diguanylate cyclase CFN77_02495 SM00091 PAS domain CFN77_02495 SM00387 Histidine kinase-like ATPases CFN77_02500 SM00448 cheY-homologous receiver domain CFN77_02520 SM00382 ATPases associated with a variety of cellular activities CFN77_02565 SM00487 DEAD-like helicases superfamily CFN77_02565 SM00490 helicase superfamily c-terminal domain CFN77_02595 SM01005 Alanine racemase, C-terminal domain CFN77_02625 SM00331 Sigma factor PP2C-like phosphatases CFN77_02645 SM00331 Sigma factor PP2C-like phosphatases CFN77_02645 SM00332 Serine/threonine phosphatases, family 2C, catalytic domain CFN77_02650 SM00316 Ribosomal protein S1-like RNA-binding domain CFN77_02650 SM00732 Likely ribonuclease with RNase H fold. CFN77_02660 SM00731 SprT homologues. CFN77_02670 SM00861 Transketolase, pyrimidine binding domain CFN77_02685 SM00382 ATPases associated with a variety of cellular activities CFN77_02735 SM00357 Cold shock protein domain CFN77_02740 SM01058 CarD-like/TRCF domain CFN77_02745 SM00829 Enoylreductase CFN77_02750 SM00422 helix_turn_helix, mercury resistance CFN77_02790 SM00870 CFN77_02790 CFN77_02800 SM00347 helix_turn_helix multiple antibiotic resistance protein CFN77_02830 SM00387 Histidine kinase-like ATPases CFN77_02835 SM00421 helix_turn_helix, Lux Regulon CFN77_02835 SM00448 cheY-homologous receiver domain CFN77_02845 SM00850 LytTr DNA-binding domain CFN77_02890 SM00347 helix_turn_helix multiple antibiotic resistance protein CFN77_02910 SM00530 Helix-turn-helix XRE-family like proteins CFN77_03035 SM00382 ATPases associated with a variety of cellular activities CFN77_03045 SM00881 CoA binding domain CFN77_03075 SM00883 Chaperonin 10 Kd subunit CFN77_03085 SM00347 helix_turn_helix multiple antibiotic resistance protein CFN77_03165 SM00460 Transglutaminase/protease-like homologues CFN77_03180 SM00342 helix_turn_helix, arabinose operon control protein CFN77_03185 SM00917 LeuA allosteric (dimerisation) domain CFN77_03270 SM01001 AIR carboxylase CFN77_03280 SM00998 Adenylosuccinate lyase C-terminus CFN77_03295 SM01211 CFN77_03295 CFN77_03320 SM00798 AICARFT/IMPCHase bienzyme CFN77_03320 SM00851 MGS-like domain CFN77_03325 SM01209 CFN77_03325 CFN77_03325 SM01210 CFN77_03325 CFN77_03350 SM00882 Coenzyme A transferase CFN77_03355 SM00882 Coenzyme A transferase CFN77_03410 SM00278 Helix-hairpin-helix DNA-binding motif class 1 CFN77_03410 SM00292 breast cancer carboxy-terminal domain CFN77_03410 SM00532 Ligase N family CFN77_03450 SM00845 GatB domain CFN77_03475 SM00046 Diacylglycerol kinase catalytic domain (presumed) CFN77_03490 SM00860 SMI1 / KNR4 family CFN77_03635 SM00382 ATPases associated with a variety of cellular activities CFN77_03650 SM00422 helix_turn_helix, mercury resistance CFN77_03660 SM00382 ATPases associated with a variety of cellular activities CFN77_03665 SM00487 DEAD-like helicases superfamily CFN77_03665 SM00490 helicase superfamily c-terminal domain CFN77_03670 SM00829 Enoylreductase CFN77_03700 SM00320 WD40 repeats CFN77_03720 SM00387 Histidine kinase-like ATPases CFN77_03725 SM00448 cheY-homologous receiver domain CFN77_03740 SM00631 CFN77_03740 CFN77_03820 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). CFN77_03820 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain CFN77_03835 SM00642 Alpha-amylase domain CFN77_03840 SM00345 helix_turn_helix gluconate operon transcriptional repressor CFN77_03840 SM00866 CFN77_03840 CFN77_03875 SM00226 Low molecular weight phosphatase family CFN77_03965 SM00478 endonuclease III CFN77_03980 SM00422 helix_turn_helix, mercury resistance CFN77_03980 SM00871 Bacterial transcription activator, effector binding domain CFN77_04070 SM00342 helix_turn_helix, arabinose operon control protein CFN77_04080 SM00382 ATPases associated with a variety of cellular activities CFN77_04105 SM00829 Enoylreductase CFN77_04120 SM00347 helix_turn_helix multiple antibiotic resistance protein CFN77_04140 SM00530 Helix-turn-helix XRE-family like proteins CFN77_04215 SM00835 Cupin CFN77_04240 SM00478 endonuclease III CFN77_04270 SM00382 ATPases associated with a variety of cellular activities CFN77_04275 SM00382 ATPases associated with a variety of cellular activities CFN77_04280 SM00382 ATPases associated with a variety of cellular activities CFN77_04450 SM00855 Phosphoglycerate mutase family CFN77_04500 SM00382 ATPases associated with a variety of cellular activities CFN77_04505 SM00062 Bacterial periplasmic substrate-binding proteins CFN77_04525 SM00382 ATPases associated with a variety of cellular activities CFN77_04560 SM00567 E-Z type HEAT repeats CFN77_04575 SM00763 PrkA AAA domain CFN77_04605 SM00357 Cold shock protein domain CFN77_04615 SM00267 diguanylate cyclase CFN77_04645 SM00138 Methyltransferase, chemotaxis proteins CFN77_04645 SM00387 Histidine kinase-like ATPases CFN77_04645 SM00388 His Kinase A (phosphoacceptor) domain CFN77_04650 SM00318 Staphylococcal nuclease homologues CFN77_04735 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. CFN77_04740 SM00421 helix_turn_helix, Lux Regulon CFN77_04740 SM00448 cheY-homologous receiver domain CFN77_04760 SM01060 CFN77_04760 CFN77_04780 SM00098 Alkaline phosphatase homologues CFN77_04785 SM00257 Lysin motif CFN77_04810 SM00563 Phosphate acyltransferases CFN77_04815 SM01091 Transporter associated domain CFN77_04820 SM00422 helix_turn_helix, mercury resistance CFN77_04825 SM01091 Transporter associated domain CFN77_04885 SM00382 ATPases associated with a variety of cellular activities CFN77_04890 SM00382 ATPases associated with a variety of cellular activities CFN77_04905 SM00382 ATPases associated with a variety of cellular activities CFN77_04945 SM00729 Elongator protein 3, MiaB family, Radical SAM CFN77_04990 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. CFN77_05030 SM00347 helix_turn_helix multiple antibiotic resistance protein CFN77_05060 SM00382 ATPases associated with a variety of cellular activities CFN77_05140 SM00849 Metallo-beta-lactamase superfamily CFN77_05170 SM00855 Phosphoglycerate mutase family CFN77_05175 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). CFN77_05190 SM00914 CFN77_05190 CFN77_05200 SM01119 CFN77_05200 CFN77_05210 SM00345 helix_turn_helix gluconate operon transcriptional repressor CFN77_05235 SM00382 ATPases associated with a variety of cellular activities CFN77_05420 SM00342 helix_turn_helix, arabinose operon control protein CFN77_05455 SM01006 Siderophore biosynthesis protein domain CFN77_05480 SM01018 B12 binding domain CFN77_05495 SM00316 Ribosomal protein S1-like RNA-binding domain CFN77_05505 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). CFN77_05505 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain CFN77_05560 SM00859 Semialdehyde dehydrogenase, NAD binding domain CFN77_05580 SM01097 Carbamoyl-phosphate synthase small chain, CPSase domain CFN77_05585 SM01096 Carbamoyl-phosphate synthetase large chain, oligomerisation domain CFN77_05640 SM00825 Beta-ketoacyl synthase CFN77_05650 SM00382 ATPases associated with a variety of cellular activities CFN77_05655 SM00382 ATPases associated with a variety of cellular activities CFN77_05700 SM00382 ATPases associated with a variety of cellular activities CFN77_05705 SM00382 ATPases associated with a variety of cellular activities CFN77_05735 SM00155 Phospholipase D. Active site motifs. CFN77_05775 SM01118 CFN77_05775 CFN77_05785 SM00954 Region found in RelA / SpoT proteins CFN77_05955 SM00530 Helix-turn-helix XRE-family like proteins CFN77_05970 SM00530 Helix-turn-helix XRE-family like proteins CFN77_06085 SM00470 ParB-like nuclease domain CFN77_06195 SM00257 Lysin motif CFN77_06255 SM00644 CFN77_06255 CFN77_06290 SM00860 SMI1 / KNR4 family CFN77_06325 SM01059 Chloramphenicol acetyltransferase CFN77_06330 SM00028 Tetratricopeptide repeats CFN77_06385 SM00028 Tetratricopeptide repeats CFN77_06405 SM01005 Alanine racemase, C-terminal domain CFN77_06410 SM00829 Enoylreductase CFN77_06420 SM00612 CFN77_06420 CFN77_06445 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). CFN77_06470 SM00257 Lysin motif CFN77_06470 SM00644 CFN77_06470 CFN77_06495 SM01022 CFN77_06495 CFN77_06520 SM00382 ATPases associated with a variety of cellular activities CFN77_06545 SM00829 Enoylreductase CFN77_06555 SM00861 Transketolase, pyrimidine binding domain CFN77_06560 SM01059 Chloramphenicol acetyltransferase CFN77_06600 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. CFN77_06625 SM00382 ATPases associated with a variety of cellular activities CFN77_06640 SM00922 Mandelate racemase / muconate lactonizing enzyme, C-terminal domain CFN77_06650 SM00382 ATPases associated with a variety of cellular activities CFN77_06685 SM00342 helix_turn_helix, arabinose operon control protein CFN77_06710 SM00359 Putative RNA-binding Domain in PseudoUridine synthase and Archaeosine transglycosylase CFN77_06720 SM00028 Tetratricopeptide repeats CFN77_06735 SM00347 helix_turn_helix multiple antibiotic resistance protein CFN77_06765 SM00530 Helix-turn-helix XRE-family like proteins CFN77_06770 SM00448 cheY-homologous receiver domain CFN77_06770 SM00862 Transcriptional regulatory protein, C terminal CFN77_06775 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain CFN77_06775 SM00387 Histidine kinase-like ATPases CFN77_06775 SM00388 His Kinase A (phosphoacceptor) domain CFN77_06800 SM00116 Domain in cystathionine beta-synthase and other proteins. CFN77_06800 SM00924 MgtE intracellular N domain CFN77_06820 SM00422 helix_turn_helix, mercury resistance CFN77_06835 SM00347 helix_turn_helix multiple antibiotic resistance protein CFN77_06845 SM00052 Putative diguanylate phosphodiesterase CFN77_06845 SM00267 diguanylate cyclase CFN77_06910 SM00091 PAS domain CFN77_06910 SM00387 Histidine kinase-like ATPases CFN77_06910 SM00388 His Kinase A (phosphoacceptor) domain CFN77_06945 SM01007 Class II Aldolase and Adducin N-terminal domain CFN77_06960 SM00387 Histidine kinase-like ATPases CFN77_06960 SM00388 His Kinase A (phosphoacceptor) domain CFN77_06965 SM00347 helix_turn_helix multiple antibiotic resistance protein CFN77_06985 SM00382 ATPases associated with a variety of cellular activities CFN77_06985 SM01086 C-terminal, D2-small domain, of ClpB protein CFN77_07055 SM00354 helix_turn _helix lactose operon repressor CFN77_07060 SM01061 CAT RNA binding domain CFN77_07090 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). CFN77_07090 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain CFN77_07115 SM00091 PAS domain CFN77_07115 SM00387 Histidine kinase-like ATPases CFN77_07115 SM00388 His Kinase A (phosphoacceptor) domain CFN77_07140 SM00260 Two component signalling adaptor domain CFN77_07140 SM00448 cheY-homologous receiver domain CFN77_07160 SM00257 Lysin motif CFN77_07175 SM00052 Putative diguanylate phosphodiesterase CFN77_07280 SM00852 Probable molybdopterin binding domain CFN77_07315 SM00382 ATPases associated with a variety of cellular activities CFN77_07325 SM00420 helix_turn_helix, Deoxyribose operon repressor CFN77_07325 SM01134 CFN77_07325 CFN77_07350 SM00382 ATPases associated with a variety of cellular activities CFN77_07370 SM00966 SpoVT / AbrB like domain CFN77_07375 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) CFN77_07375 SM00091 PAS domain CFN77_07375 SM00387 Histidine kinase-like ATPases CFN77_07375 SM00388 His Kinase A (phosphoacceptor) domain CFN77_07395 SM00849 Metallo-beta-lactamase superfamily CFN77_07430 SM00861 Transketolase, pyrimidine binding domain CFN77_07515 SM00838 Elongation factor G C-terminus CFN77_07540 SM00670 Large family of predicted nucleotide-binding domains CFN77_07565 SM00878 Biotin carboxylase C-terminal domain CFN77_07615 SM00116 Domain in cystathionine beta-synthase and other proteins. CFN77_07670 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. CFN77_07690 SM00717 SANT SWI3, ADA2, N-CoR and TFIIIB'' DNA-binding domains CFN77_07725 SM00740 CFN77_07725 CFN77_07735 SM00740 CFN77_07735 CFN77_07790 SM00842 Cell division protein FtsA CFN77_07795 SM00864 Tubulin/FtsZ family, GTPase domain CFN77_07795 SM00865 Tubulin/FtsZ family, C-terminal domain CFN77_07825 SM00858 CFN77_07825 CFN77_07850 SM00382 ATPases associated with a variety of cellular activities CFN77_07880 SM00363 S4 RNA-binding domain CFN77_07905 SM00363 S4 RNA-binding domain CFN77_07930 SM01097 Carbamoyl-phosphate synthase small chain, CPSase domain CFN77_07935 SM00851 MGS-like domain CFN77_07935 SM01096 Carbamoyl-phosphate synthetase large chain, oligomerisation domain CFN77_07935 SM01209 CFN77_07935 CFN77_07950 SM00934 Orotidine 5'-phosphate decarboxylase / HUMPS family CFN77_08005 SM00831 Cation transporter/ATPase, N-terminus CFN77_08020 SM00072 Guanylate kinase homologues. CFN77_08025 SM01409 CFN77_08025 CFN77_08035 SM00487 DEAD-like helicases superfamily CFN77_08035 SM00490 helicase superfamily c-terminal domain CFN77_08060 SM00331 Sigma factor PP2C-like phosphatases CFN77_08060 SM00332 Serine/threonine phosphatases, family 2C, catalytic domain CFN77_08065 SM00220 Serine/Threonine protein kinases, catalytic domain CFN77_08065 SM00740 CFN77_08065 CFN77_08080 SM00983 Thiamin pyrophosphokinase, vitamin B1 binding domain CFN77_08100 SM01120 CFN77_08100 CFN77_08100 SM01121 CFN77_08100 CFN77_08115 SM00487 DEAD-like helicases superfamily CFN77_08115 SM00490 helicase superfamily c-terminal domain CFN77_08130 SM00827 Acyl transferase domain in polyketide synthase (PKS) enzymes. CFN77_08135 SM00822 CFN77_08135 CFN77_08145 SM00358 Double-stranded RNA binding motif CFN77_08145 SM00535 Ribonuclease III family CFN77_08150 SM00968 SMC proteins Flexible Hinge Domain CFN77_08155 SM00382 ATPases associated with a variety of cellular activities CFN77_08155 SM00962 SRP54-type protein, GTPase domain CFN77_08155 SM00963 SRP54-type protein, helical bundle domain CFN77_08165 SM00382 ATPases associated with a variety of cellular activities CFN77_08165 SM00962 SRP54-type protein, GTPase domain CFN77_08165 SM00963 SRP54-type protein, helical bundle domain CFN77_08225 SM00881 CoA binding domain CFN77_08235 SM00436 Bacterial DNA topoisomeraes I ATP-binding domain CFN77_08235 SM00437 Bacterial DNA topoisomerase I DNA-binding domain CFN77_08235 SM00493 CFN77_08235 CFN77_08255 SM00382 ATPases associated with a variety of cellular activities CFN77_08255 SM01086 C-terminal, D2-small domain, of ClpB protein CFN77_08295 SM00382 ATPases associated with a variety of cellular activities CFN77_08345 SM00448 cheY-homologous receiver domain CFN77_08380 SM00962 SRP54-type protein, GTPase domain CFN77_08390 SM00448 cheY-homologous receiver domain CFN77_08395 SM00073 Histidine Phosphotransfer domain CFN77_08395 SM00260 Two component signalling adaptor domain CFN77_08395 SM00387 Histidine kinase-like ATPases CFN77_08395 SM01231 CFN77_08395 CFN77_08400 SM00260 Two component signalling adaptor domain CFN77_08460 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. CFN77_08470 SM00479 CFN77_08470 CFN77_08470 SM00481 DNA polymerase alpha chain like domain CFN77_08475 SM01067 Cellulose binding domain CFN77_08485 SM00633 Glycosyl hydrolase family 10 CFN77_08505 SM00316 Ribosomal protein S1-like RNA-binding domain CFN77_08505 SM00322 K homology RNA-binding domain CFN77_08540 SM00904 Riboflavin kinase CFN77_08545 SM01387 CFN77_08545 CFN77_08550 SM00316 Ribosomal protein S1-like RNA-binding domain CFN77_08550 SM00322 K homology RNA-binding domain CFN77_08580 SM00382 ATPases associated with a variety of cellular activities CFN77_08585 SM00382 ATPases associated with a variety of cellular activities CFN77_08600 SM01118 CFN77_08600 CFN77_08650 SM00481 DNA polymerase alpha chain like domain CFN77_08725 SM00859 Semialdehyde dehydrogenase, NAD binding domain CFN77_08735 SM01130 CFN77_08735 CFN77_08740 SM00849 Metallo-beta-lactamase superfamily CFN77_08755 SM00382 ATPases associated with a variety of cellular activities CFN77_08755 SM00843 CFN77_08755 CFN77_08760 SM00345 helix_turn_helix gluconate operon transcriptional repressor CFN77_08760 SM00866 CFN77_08760 CFN77_08785 SM00347 helix_turn_helix multiple antibiotic resistance protein CFN77_08820 SM00852 Probable molybdopterin binding domain CFN77_08825 SM00382 ATPases associated with a variety of cellular activities CFN77_08830 SM00322 K homology RNA-binding domain CFN77_08830 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. CFN77_08850 SM00829 Enoylreductase CFN77_08865 SM00729 Elongator protein 3, MiaB family, Radical SAM CFN77_08880 SM00533 DNA-binding domain of DNA mismatch repair MUTS family CFN77_08880 SM00534 ATPase domain of DNA mismatch repair MUTS family CFN77_08885 SM00853 MutL C terminal dimerisation domain CFN77_08885 SM01340 CFN77_08885 CFN77_08905 SM01058 CarD-like/TRCF domain CFN77_08915 SM00028 Tetratricopeptide repeats CFN77_09000 SM00646 CFN77_09000 CFN77_09005 SM00382 ATPases associated with a variety of cellular activities CFN77_09020 SM00422 helix_turn_helix, mercury resistance CFN77_09025 SM01230 CFN77_09025 CFN77_09040 SM00860 SMI1 / KNR4 family CFN77_09080 SM00506 Appr-1"-p processing enzyme CFN77_09090 SM00014 Acid phosphatase homologues CFN77_09135 SM00559 Ku70 and Ku80 are 70kDa and 80kDa subunits of the Lupus Ku autoantigen CFN77_09205 SM00020 Trypsin-like serine protease CFN77_09240 SM00257 Lysin motif CFN77_09245 SM00857 Resolvase, N terminal domain CFN77_09255 SM00861 Transketolase, pyrimidine binding domain CFN77_09345 SM01207 CFN77_09345 CFN77_09350 SM00881 CoA binding domain CFN77_09355 SM00387 Histidine kinase-like ATPases CFN77_09355 SM00433 TopoisomeraseII CFN77_09360 SM00434 DNA Topoisomerase IV CFN77_09375 SM01329 CFN77_09375 CFN77_09380 SM01266 CFN77_09380 CFN77_09435 SM00422 helix_turn_helix, mercury resistance CFN77_09445 SM00387 Histidine kinase-like ATPases CFN77_09445 SM00388 His Kinase A (phosphoacceptor) domain CFN77_09450 SM00448 cheY-homologous receiver domain CFN77_09450 SM00862 Transcriptional regulatory protein, C terminal CFN77_09460 SM00606 Cellulose Binding Domain Type IV CFN77_09490 SM00354 helix_turn _helix lactose operon repressor CFN77_09535 SM00347 helix_turn_helix multiple antibiotic resistance protein CFN77_09570 SM00155 Phospholipase D. Active site motifs. CFN77_09585 SM00100 Cyclic nucleotide-monophosphate binding domain CFN77_09640 SM00878 Biotin carboxylase C-terminal domain CFN77_09665 SM00420 helix_turn_helix, Deoxyribose operon repressor CFN77_09665 SM01134 CFN77_09665 CFN77_09790 SM00926 Molybdopterin oxidoreductase Fe4S4 domain CFN77_09820 SM00382 ATPases associated with a variety of cellular activities CFN77_09825 SM00382 ATPases associated with a variety of cellular activities CFN77_09830 SM00422 helix_turn_helix, mercury resistance CFN77_09845 SM00359 Putative RNA-binding Domain in PseudoUridine synthase and Archaeosine transglycosylase CFN77_09860 SM00926 Molybdopterin oxidoreductase Fe4S4 domain CFN77_09925 SM00849 Metallo-beta-lactamase superfamily CFN77_09930 SM00871 Bacterial transcription activator, effector binding domain CFN77_09945 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor CFN77_09985 SM00257 Lysin motif CFN77_09990 SM00341 Helicase and RNase D C-terminal CFN77_09990 SM00487 DEAD-like helicases superfamily CFN77_09990 SM00490 helicase superfamily c-terminal domain CFN77_09990 SM00956 CFN77_09990 CFN77_10050 SM00861 Transketolase, pyrimidine binding domain CFN77_10055 SM00327 von Willebrand factor (vWF) type A domain CFN77_10060 SM00382 ATPases associated with a variety of cellular activities CFN77_10070 SM00257 Lysin motif CFN77_10135 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. CFN77_10135 SM00245 tail specific protease CFN77_10165 SM00014 Acid phosphatase homologues CFN77_10195 SM00091 PAS domain CFN77_10195 SM00382 ATPases associated with a variety of cellular activities CFN77_10240 SM00347 helix_turn_helix multiple antibiotic resistance protein CFN77_10340 SM00567 E-Z type HEAT repeats CFN77_10340 SM00932 Scaffold protein Nfu/NifU N terminal CFN77_10345 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. CFN77_10375 SM00357 Cold shock protein domain CFN77_10410 SM00279 Helix-hairpin-helix class 2 (Pol1 family) motifs CFN77_10410 SM00475 5'-3' exonuclease CFN77_10465 SM00491 CFN77_10465 CFN77_10475 SM00981 CFN77_10475 CFN77_10505 SM00487 DEAD-like helicases superfamily CFN77_10505 SM00490 helicase superfamily c-terminal domain CFN77_10565 SM00478 endonuclease III CFN77_10565 SM00525 CFN77_10565 CFN77_10590 SM00479 CFN77_10590 CFN77_10590 SM00487 DEAD-like helicases superfamily CFN77_10590 SM00491 CFN77_10590 CFN77_10630 SM00851 MGS-like domain CFN77_10680 SM00914 CFN77_10680 CFN77_10685 SM00028 Tetratricopeptide repeats CFN77_10750 SM00138 Methyltransferase, chemotaxis proteins CFN77_10755 SM00562 CFN77_10755 CFN77_10785 SM00411 bacterial (prokaryotic) histone like domain CFN77_10845 SM01240 CFN77_10845 CFN77_10850 SM00316 Ribosomal protein S1-like RNA-binding domain CFN77_10890 SM00839 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase CFN77_10910 SM00257 Lysin motif CFN77_10920 SM00487 DEAD-like helicases superfamily CFN77_10920 SM00490 helicase superfamily c-terminal domain CFN77_10945 SM00257 Lysin motif CFN77_10960 SM00091 PAS domain CFN77_10960 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain CFN77_10960 SM00387 Histidine kinase-like ATPases CFN77_10960 SM00388 His Kinase A (phosphoacceptor) domain CFN77_10965 SM00448 cheY-homologous receiver domain CFN77_10965 SM00862 Transcriptional regulatory protein, C terminal CFN77_10985 SM00363 S4 RNA-binding domain CFN77_11140 SM00387 Histidine kinase-like ATPases CFN77_11150 SM00936 Penicillin-binding protein 5, C-terminal domain CFN77_11230 SM00028 Tetratricopeptide repeats CFN77_11300 SM00849 Metallo-beta-lactamase superfamily CFN77_11320 SM00729 Elongator protein 3, MiaB family, Radical SAM CFN77_11355 SM00345 helix_turn_helix gluconate operon transcriptional repressor CFN77_11355 SM00866 CFN77_11355 CFN77_11390 SM01350 CFN77_11390 CFN77_11410 SM00260 Two component signalling adaptor domain CFN77_11440 SM00382 ATPases associated with a variety of cellular activities CFN77_11450 SM00062 Bacterial periplasmic substrate-binding proteins CFN77_11450 SM00079 Eukaryotic homologues of bacterial periplasmic substrate binding proteins. CFN77_11460 SM00046 Diacylglycerol kinase catalytic domain (presumed) CFN77_11480 SM00861 Transketolase, pyrimidine binding domain CFN77_11500 SM00839 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase CFN77_11510 SM00091 PAS domain CFN77_11510 SM00382 ATPases associated with a variety of cellular activities CFN77_11530 SM00448 cheY-homologous receiver domain CFN77_11535 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. CFN77_11550 SM00363 S4 RNA-binding domain CFN77_11555 SM00861 Transketolase, pyrimidine binding domain CFN77_11590 SM00878 Biotin carboxylase C-terminal domain CFN77_11635 SM00382 ATPases associated with a variety of cellular activities CFN77_11645 SM00841 Elongation factor P, C-terminal CFN77_11645 SM01185 CFN77_11645 CFN77_11685 SM00529 Helix-turn-helix diphteria tox regulatory element CFN77_11695 SM00450 Rhodanese Homology Domain CFN77_11715 SM00487 DEAD-like helicases superfamily CFN77_11715 SM00490 helicase superfamily c-terminal domain CFN77_11730 SM00530 Helix-turn-helix XRE-family like proteins CFN77_11790 SM00382 ATPases associated with a variety of cellular activities CFN77_11815 SM00849 Metallo-beta-lactamase superfamily CFN77_11840 SM00631 CFN77_11840 CFN77_11860 SM00028 Tetratricopeptide repeats CFN77_11900 SM00382 ATPases associated with a variety of cellular activities CFN77_11905 SM00382 ATPases associated with a variety of cellular activities CFN77_11990 SM00382 ATPases associated with a variety of cellular activities CFN77_12005 SM00518 AP endonuclease family 2 CFN77_12010 SM00487 DEAD-like helicases superfamily CFN77_12010 SM00490 helicase superfamily c-terminal domain CFN77_12050 SM00400 zinc finger CFN77_12050 SM00493 CFN77_12050 CFN77_12065 SM00116 Domain in cystathionine beta-synthase and other proteins. CFN77_12110 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. CFN77_12160 SM00729 Elongator protein 3, MiaB family, Radical SAM CFN77_12175 SM00271 DnaJ molecular chaperone homology domain CFN77_12195 SM00729 Elongator protein 3, MiaB family, Radical SAM CFN77_12200 SM00838 Elongation factor G C-terminus CFN77_12235 SM00849 Metallo-beta-lactamase superfamily CFN77_12245 SM00278 Helix-hairpin-helix DNA-binding motif class 1 CFN77_12265 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. CFN77_12275 SM01103 CFN77_12275 CFN77_12310 SM00028 Tetratricopeptide repeats CFN77_12380 SM00382 ATPases associated with a variety of cellular activities CFN77_12415 SM01007 Class II Aldolase and Adducin N-terminal domain CFN77_12425 SM00345 helix_turn_helix gluconate operon transcriptional repressor CFN77_12435 SM00347 helix_turn_helix multiple antibiotic resistance protein CFN77_12450 SM00934 Orotidine 5'-phosphate decarboxylase / HUMPS family CFN77_12520 SM00382 ATPases associated with a variety of cellular activities CFN77_12525 SM00062 Bacterial periplasmic substrate-binding proteins CFN77_12540 SM00829 Enoylreductase CFN77_12580 SM00382 ATPases associated with a variety of cellular activities CFN77_12700 SM00732 Likely ribonuclease with RNase H fold. CFN77_12710 SM00863 Threonyl and Alanyl tRNA synthetase second additional domain CFN77_12720 SM00382 ATPases associated with a variety of cellular activities CFN77_12725 SM00062 Bacterial periplasmic substrate-binding proteins CFN77_12725 SM00079 Eukaryotic homologues of bacterial periplasmic substrate binding proteins. CFN77_12760 SM00028 Tetratricopeptide repeats CFN77_12780 SM00382 ATPases associated with a variety of cellular activities CFN77_12805 SM00287 Bacterial SH3 domain homologues CFN77_12805 SM00646 CFN77_12805 CFN77_12815 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. CFN77_12815 SM00954 Region found in RelA / SpoT proteins CFN77_12865 SM01323 CFN77_12865 CFN77_12885 SM00382 ATPases associated with a variety of cellular activities CFN77_12890 SM00278 Helix-hairpin-helix DNA-binding motif class 1 CFN77_12930 SM00257 Lysin motif CFN77_12975 SM01317 CFN77_12975 CFN77_13070 SM00257 Lysin motif CFN77_13085 SM01004 Delta-aminolevulinic acid dehydratase CFN77_13120 SM00382 ATPases associated with a variety of cellular activities CFN77_13120 SM00464 Found in ATP-dependent protease La (LON) CFN77_13125 SM00382 ATPases associated with a variety of cellular activities CFN77_13130 SM00382 ATPases associated with a variety of cellular activities CFN77_13130 SM00994 ClpX C4-type zinc finger CFN77_13130 SM01086 C-terminal, D2-small domain, of ClpB protein CFN77_13155 SM01329 CFN77_13155 CFN77_13160 SM00917 LeuA allosteric (dimerisation) domain CFN77_13225 SM00612 CFN77_13225 CFN77_13315 SM00530 Helix-turn-helix XRE-family like proteins CFN77_13325 SM00530 Helix-turn-helix XRE-family like proteins CFN77_13340 SM00530 Helix-turn-helix XRE-family like proteins CFN77_13410 SM00909 Sporulation and spore germination CFN77_13420 SM00347 helix_turn_helix multiple antibiotic resistance protein CFN77_13425 SM00421 helix_turn_helix, Lux Regulon CFN77_13490 SM00382 ATPases associated with a variety of cellular activities CFN77_13500 SM00465 GIY-YIG type nucleases (URI domain) CFN77_13510 SM00813 Alpha-L-arabinofuranosidase C-terminus CFN77_13515 SM00893 Electron transfer flavoprotein domain CFN77_13520 SM00893 Electron transfer flavoprotein domain CFN77_13550 SM00463 Small MutS-related domain CFN77_13550 SM00533 DNA-binding domain of DNA mismatch repair MUTS family CFN77_13550 SM00534 ATPase domain of DNA mismatch repair MUTS family CFN77_13555 SM00278 Helix-hairpin-helix DNA-binding motif class 1 CFN77_13555 SM00481 DNA polymerase alpha chain like domain CFN77_13555 SM00483 DNA polymerase X family CFN77_13575 SM00873 B3/4 domain CFN77_13575 SM00874 tRNA synthetase B5 domain CFN77_13575 SM00896 Ferredoxin-fold anticodon binding domain CFN77_13585 SM00967 RNA 2'-O ribose methyltransferase substrate binding CFN77_13640 SM00448 cheY-homologous receiver domain CFN77_13640 SM00850 LytTr DNA-binding domain CFN77_13645 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. CFN77_13645 SM00387 Histidine kinase-like ATPases CFN77_13655 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) CFN77_13655 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). CFN77_13660 SM00863 Threonyl and Alanyl tRNA synthetase second additional domain CFN77_13675 SM00382 ATPases associated with a variety of cellular activities CFN77_13700 SM00846 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain CFN77_13715 SM00898 Formamidopyrimidine-DNA glycosylase N-terminal domain CFN77_13715 SM01232 CFN77_13715 CFN77_13720 SM00279 Helix-hairpin-helix class 2 (Pol1 family) motifs CFN77_13720 SM00474 3'-5' exonuclease CFN77_13720 SM00475 5'-3' exonuclease CFN77_13720 SM00482 DNA polymerase A domain CFN77_13725 SM00387 Histidine kinase-like ATPases CFN77_13725 SM00388 His Kinase A (phosphoacceptor) domain CFN77_13730 SM00448 cheY-homologous receiver domain CFN77_13730 SM00862 Transcriptional regulatory protein, C terminal CFN77_13740 SM01329 CFN77_13740 CFN77_13785 SM00919 Malic enzyme, NAD binding domain CFN77_13785 SM01274 CFN77_13785 CFN77_13790 SM00481 DNA polymerase alpha chain like domain CFN77_13825 SM00116 Domain in cystathionine beta-synthase and other proteins. CFN77_13830 SM00849 Metallo-beta-lactamase superfamily CFN77_13855 SM00852 Probable molybdopterin binding domain CFN77_13900 SM00487 DEAD-like helicases superfamily CFN77_13900 SM00490 helicase superfamily c-terminal domain CFN77_13915 SM00421 helix_turn_helix, Lux Regulon CFN77_13915 SM00448 cheY-homologous receiver domain CFN77_13925 SM00448 cheY-homologous receiver domain CFN77_13925 SM00862 Transcriptional regulatory protein, C terminal CFN77_13930 SM00387 Histidine kinase-like ATPases CFN77_13935 SM00382 ATPases associated with a variety of cellular activities CFN77_13955 SM00347 helix_turn_helix multiple antibiotic resistance protein CFN77_13985 SM00981 CFN77_13985 CFN77_14020 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. CFN77_14025 SM00363 S4 RNA-binding domain CFN77_14025 SM01390 CFN77_14025 CFN77_14060 SM00363 S4 RNA-binding domain CFN77_14075 SM00116 Domain in cystathionine beta-synthase and other proteins. CFN77_14085 SM00354 helix_turn _helix lactose operon repressor CFN77_14090 SM00830 Chorismate mutase type II CFN77_14115 SM00382 ATPases associated with a variety of cellular activities CFN77_14115 SM00843 CFN77_14115 CFN77_14155 SM00919 Malic enzyme, NAD binding domain CFN77_14155 SM01274 CFN77_14155 CFN77_14160 SM00849 Metallo-beta-lactamase superfamily CFN77_14180 SM00046 Diacylglycerol kinase catalytic domain (presumed) CFN77_14220 SM00420 helix_turn_helix, Deoxyribose operon repressor CFN77_14225 SM00363 S4 RNA-binding domain CFN77_14260 SM00450 Rhodanese Homology Domain CFN77_14290 SM00342 helix_turn_helix, arabinose operon control protein CFN77_14340 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) CFN77_14340 SM00091 PAS domain CFN77_14355 SM00382 ATPases associated with a variety of cellular activities CFN77_14365 SM00382 ATPases associated with a variety of cellular activities CFN77_14370 SM00345 helix_turn_helix gluconate operon transcriptional repressor CFN77_14390 SM00729 Elongator protein 3, MiaB family, Radical SAM CFN77_14455 SM00563 Phosphate acyltransferases CFN77_14470 SM00382 ATPases associated with a variety of cellular activities CFN77_14535 SM01234 CFN77_14535 CFN77_14540 SM00947 Carbonic anhydrase CFN77_14580 SM00922 Mandelate racemase / muconate lactonizing enzyme, C-terminal domain CFN77_14760 SM00530 Helix-turn-helix XRE-family like proteins CFN77_14775 SM00244 prohibitin homologues CFN77_14815 SM00644 CFN77_14815 CFN77_14895 SM00257 Lysin motif CFN77_14980 SM00421 helix_turn_helix, Lux Regulon CFN77_15000 SM00530 Helix-turn-helix XRE-family like proteins CFN77_15005 SM00530 Helix-turn-helix XRE-family like proteins CFN77_15015 SM00729 Elongator protein 3, MiaB family, Radical SAM CFN77_15015 SM00876 Biotin and Thiamin Synthesis associated domain CFN77_15050 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). CFN77_15050 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain CFN77_15050 SM00319 Homologues of the ligand binding domain of Tar CFN77_15055 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). CFN77_15055 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain CFN77_15060 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). CFN77_15060 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain CFN77_15060 SM00319 Homologues of the ligand binding domain of Tar CFN77_15065 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). CFN77_15065 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain CFN77_15065 SM00319 Homologues of the ligand binding domain of Tar CFN77_15090 SM01091 Transporter associated domain CFN77_15140 SM00316 Ribosomal protein S1-like RNA-binding domain CFN77_15150 SM00344 helix_turn_helix ASNC type CFN77_15170 SM00387 Histidine kinase-like ATPases CFN77_15170 SM00388 His Kinase A (phosphoacceptor) domain CFN77_15175 SM01298 CFN77_15175 CFN77_15180 SM00479 CFN77_15180 CFN77_15205 SM00387 Histidine kinase-like ATPases CFN77_15210 SM00448 cheY-homologous receiver domain CFN77_15220 SM00382 ATPases associated with a variety of cellular activities CFN77_15290 SM00421 helix_turn_helix, Lux Regulon CFN77_15290 SM00448 cheY-homologous receiver domain CFN77_15295 SM00387 Histidine kinase-like ATPases CFN77_15320 SM00052 Putative diguanylate phosphodiesterase CFN77_15370 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. CFN77_15415 SM01002 Alanine dehydrogenase/PNT, C-terminal domain CFN77_15415 SM01003 Alanine dehydrogenase/PNT, N-terminal domain CFN77_15560 SM00729 Elongator protein 3, MiaB family, Radical SAM CFN77_15605 SM00835 Cupin CFN77_15660 SM00388 His Kinase A (phosphoacceptor) domain CFN77_15665 SM00448 cheY-homologous receiver domain CFN77_15665 SM00862 Transcriptional regulatory protein, C terminal CFN77_15730 SM00382 ATPases associated with a variety of cellular activities CFN77_15750 SM00382 ATPases associated with a variety of cellular activities CFN77_15750 SM00930 CFN77_15750 CFN77_15765 SM00493 CFN77_15765 CFN77_15830 SM00382 ATPases associated with a variety of cellular activities CFN77_15845 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. CFN77_15850 SM00448 cheY-homologous receiver domain CFN77_15850 SM00862 Transcriptional regulatory protein, C terminal CFN77_15855 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain CFN77_15855 SM00387 Histidine kinase-like ATPases CFN77_15855 SM00388 His Kinase A (phosphoacceptor) domain CFN77_15900 SM00421 helix_turn_helix, Lux Regulon CFN77_15900 SM00448 cheY-homologous receiver domain CFN77_15905 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain CFN77_15905 SM00387 Histidine kinase-like ATPases CFN77_15970 SM01130 CFN77_15970 CFN77_15975 SM00382 ATPases associated with a variety of cellular activities CFN77_15990 SM00710 Parallel beta-helix repeats CFN77_15995 SM00858 CFN77_15995 CFN77_16005 SM00354 helix_turn _helix lactose operon repressor CFN77_16015 SM00387 Histidine kinase-like ATPases CFN77_16015 SM00388 His Kinase A (phosphoacceptor) domain CFN77_16020 SM00448 cheY-homologous receiver domain CFN77_16020 SM00862 Transcriptional regulatory protein, C terminal CFN77_16025 SM00382 ATPases associated with a variety of cellular activities CFN77_16060 SM00347 helix_turn_helix multiple antibiotic resistance protein CFN77_16120 SM00382 ATPases associated with a variety of cellular activities CFN77_16145 SM00448 cheY-homologous receiver domain CFN77_16150 SM00387 Histidine kinase-like ATPases CFN77_16185 SM00267 diguanylate cyclase CFN77_16200 SM00487 DEAD-like helicases superfamily CFN77_16225 SM00316 Ribosomal protein S1-like RNA-binding domain CFN77_16225 SM00357 Cold shock protein domain CFN77_16225 SM00955 CFN77_16225 CFN77_16240 SM00966 SpoVT / AbrB like domain CFN77_16245 SM00530 Helix-turn-helix XRE-family like proteins CFN77_16250 SM00530 Helix-turn-helix XRE-family like proteins CFN77_16255 SM00530 Helix-turn-helix XRE-family like proteins CFN77_16280 SM00116 Domain in cystathionine beta-synthase and other proteins. CFN77_16280 SM00382 ATPases associated with a variety of cellular activities CFN77_16320 SM00382 ATPases associated with a variety of cellular activities CFN77_16330 SM01192 CFN77_16330 CFN77_16330 SM01193 CFN77_16330 CFN77_16350 SM00846 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain CFN77_16370 SM00382 ATPases associated with a variety of cellular activities CFN77_16375 SM00345 helix_turn_helix gluconate operon transcriptional repressor CFN77_16375 SM00895 CFN77_16375 CFN77_16395 SM00382 ATPases associated with a variety of cellular activities CFN77_16400 SM00382 ATPases associated with a variety of cellular activities CFN77_16485 SM00530 Helix-turn-helix XRE-family like proteins CFN77_16515 SM00382 ATPases associated with a variety of cellular activities CFN77_16520 SM00382 ATPases associated with a variety of cellular activities CFN77_16525 SM00382 ATPases associated with a variety of cellular activities CFN77_16585 SM00947 Carbonic anhydrase CFN77_16640 SM00028 Tetratricopeptide repeats CFN77_16740 SM00345 helix_turn_helix gluconate operon transcriptional repressor CFN77_16740 SM00866 CFN77_16740 CFN77_16780 SM00382 ATPases associated with a variety of cellular activities CFN77_16785 SM00487 DEAD-like helicases superfamily CFN77_16785 SM00490 helicase superfamily c-terminal domain CFN77_16815 SM00448 cheY-homologous receiver domain CFN77_16815 SM00862 Transcriptional regulatory protein, C terminal CFN77_16820 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain CFN77_16820 SM00387 Histidine kinase-like ATPases CFN77_16820 SM00388 His Kinase A (phosphoacceptor) domain CFN77_16850 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. CFN77_16860 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. CFN77_16860 SM00245 tail specific protease CFN77_16880 SM00382 ATPases associated with a variety of cellular activities CFN77_16915 SM00957 SecA DEAD-like domain CFN77_16915 SM00958 SecA preprotein cross-linking domain CFN77_16925 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). CFN77_16925 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain CFN77_17005 SM00487 DEAD-like helicases superfamily CFN77_17005 SM00490 helicase superfamily c-terminal domain CFN77_17015 SM00421 helix_turn_helix, Lux Regulon CFN77_17015 SM00448 cheY-homologous receiver domain CFN77_17020 SM00387 Histidine kinase-like ATPases CFN77_17065 SM00984 UDP binding domain CFN77_17090 SM00646 CFN77_17090 CFN77_17095 SM00646 CFN77_17095 CFN77_17125 SM00382 ATPases associated with a variety of cellular activities CFN77_17165 SM00047 Lysozyme subfamily 2 CFN77_17165 SM00287 Bacterial SH3 domain homologues CFN77_17190 SM00342 helix_turn_helix, arabinose operon control protein CFN77_17190 SM00448 cheY-homologous receiver domain CFN77_17195 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain CFN77_17195 SM00387 Histidine kinase-like ATPases CFN77_17220 SM00354 helix_turn _helix lactose operon repressor CFN77_17285 SM00854 Bacterial capsule synthesis protein PGA_cap CFN77_17315 SM00354 helix_turn _helix lactose operon repressor CFN77_17330 SM00382 ATPases associated with a variety of cellular activities CFN77_17345 SM00903 Flavin reductase like domain CFN77_17365 SM00344 helix_turn_helix ASNC type CFN77_17380 SM00984 UDP binding domain CFN77_17395 SM00487 DEAD-like helicases superfamily CFN77_17395 SM00490 helicase superfamily c-terminal domain CFN77_17400 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) CFN77_17400 SM00091 PAS domain CFN77_17455 SM00347 helix_turn_helix multiple antibiotic resistance protein CFN77_17465 SM00014 Acid phosphatase homologues CFN77_17475 SM00062 Bacterial periplasmic substrate-binding proteins CFN77_17475 SM00079 Eukaryotic homologues of bacterial periplasmic substrate binding proteins. CFN77_17485 SM00382 ATPases associated with a variety of cellular activities CFN77_17495 SM00938 Nitrogen regulatory protein P-II CFN77_17525 SM00382 ATPases associated with a variety of cellular activities CFN77_17555 SM00833 Cobalamin synthesis protein cobW C-terminal domain CFN77_17565 SM00729 Elongator protein 3, MiaB family, Radical SAM CFN77_17585 SM00327 von Willebrand factor (vWF) type A domain CFN77_17590 SM00327 von Willebrand factor (vWF) type A domain CFN77_17625 SM00382 ATPases associated with a variety of cellular activities CFN77_17685 SM00226 Low molecular weight phosphatase family CFN77_17720 SM00937 CFN77_17720 CFN77_17735 SM00919 Malic enzyme, NAD binding domain CFN77_17735 SM01274 CFN77_17735 CFN77_17750 SM00357 Cold shock protein domain CFN77_17750 SM00382 ATPases associated with a variety of cellular activities CFN77_17750 SM00959 Rho termination factor, N-terminal domain CFN77_17775 SM00448 cheY-homologous receiver domain CFN77_17830 SM00155 Phospholipase D. Active site motifs. CFN77_17855 SM00382 ATPases associated with a variety of cellular activities CFN77_17860 SM00155 Phospholipase D. Active site motifs. CFN77_17875 SM00836 DALR anticodon binding domain CFN77_17875 SM01016 Arginyl tRNA synthetase N terminal dom CFN77_17960 SM00062 Bacterial periplasmic substrate-binding proteins CFN77_17970 SM00382 ATPases associated with a variety of cellular activities CFN77_17980 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. CFN77_18005 SM00028 Tetratricopeptide repeats CFN77_18015 SM00860 SMI1 / KNR4 family CFN77_18020 SM00860 SMI1 / KNR4 family CFN77_18055 SM00344 helix_turn_helix ASNC type CFN77_18125 SM00858 CFN77_18125 CFN77_18165 SM00835 Cupin CFN77_18190 SM00986 Uracil DNA glycosylase superfamily CFN77_18190 SM00987 UreE urease accessory protein, C-terminal domain CFN77_18235 SM00640 Glycosyl hydrolases family 32 CFN77_18245 SM01061 CAT RNA binding domain CFN77_18330 SM00342 helix_turn_helix, arabinose operon control protein CFN77_18370 SM00028 Tetratricopeptide repeats CFN77_18425 SM00359 Putative RNA-binding Domain in PseudoUridine synthase and Archaeosine transglycosylase CFN77_18435 SM00382 ATPases associated with a variety of cellular activities CFN77_18445 SM00062 Bacterial periplasmic substrate-binding proteins CFN77_18445 SM00079 Eukaryotic homologues of bacterial periplasmic substrate binding proteins. CFN77_18460 SM00954 Region found in RelA / SpoT proteins CFN77_18470 SM00382 ATPases associated with a variety of cellular activities CFN77_18480 SM00710 Parallel beta-helix repeats CFN77_18535 SM00839 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase CFN77_18555 SM00656 CFN77_18555 CFN77_18560 SM00382 ATPases associated with a variety of cellular activities CFN77_18565 SM00382 ATPases associated with a variety of cellular activities CFN77_18580 SM00382 ATPases associated with a variety of cellular activities CFN77_18600 SM00382 ATPases associated with a variety of cellular activities CFN77_18615 SM00725 NEAr Transporter domain CFN77_18620 SM00725 NEAr Transporter domain CFN77_18625 SM00725 NEAr Transporter domain CFN77_18720 SM00870 CFN77_18720 CFN77_18725 SM00530 Helix-turn-helix XRE-family like proteins CFN77_18730 SM00530 Helix-turn-helix XRE-family like proteins CFN77_18810 SM00382 ATPases associated with a variety of cellular activities CFN77_18840 SM01061 CAT RNA binding domain CFN77_18850 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). CFN77_18860 SM00382 ATPases associated with a variety of cellular activities CFN77_18910 SM00347 helix_turn_helix multiple antibiotic resistance protein CFN77_18910 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor CFN77_18920 SM00941 Pyrimidine nucleoside phosphorylase C-terminal domain CFN77_18930 SM01133 CFN77_18930 CFN77_18965 SM00421 helix_turn_helix, Lux Regulon CFN77_18975 SM00422 helix_turn_helix, mercury resistance CFN77_18990 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) CFN77_18990 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). CFN77_19060 SM00354 helix_turn _helix lactose operon repressor CFN77_19105 SM00382 ATPases associated with a variety of cellular activities CFN77_19145 SM00382 ATPases associated with a variety of cellular activities CFN77_19155 SM00028 Tetratricopeptide repeats CFN77_19160 SM01061 CAT RNA binding domain CFN77_19200 SM00530 Helix-turn-helix XRE-family like proteins CFN77_19220 SM00354 helix_turn _helix lactose operon repressor CFN77_19285 SM00345 helix_turn_helix gluconate operon transcriptional repressor CFN77_19285 SM00866 CFN77_19285 CFN77_19340 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain CFN77_19340 SM00387 Histidine kinase-like ATPases CFN77_19340 SM00388 His Kinase A (phosphoacceptor) domain CFN77_19345 SM00448 cheY-homologous receiver domain CFN77_19345 SM00862 Transcriptional regulatory protein, C terminal CFN77_19355 SM00849 Metallo-beta-lactamase superfamily CFN77_19395 SM00382 ATPases associated with a variety of cellular activities CFN77_19415 SM00382 ATPases associated with a variety of cellular activities CFN77_19425 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. CFN77_19430 SM00849 Metallo-beta-lactamase superfamily CFN77_19445 SM00091 PAS domain CFN77_19445 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain CFN77_19445 SM00387 Histidine kinase-like ATPases CFN77_19445 SM00388 His Kinase A (phosphoacceptor) domain CFN77_19450 SM00448 cheY-homologous receiver domain CFN77_19450 SM00862 Transcriptional regulatory protein, C terminal CFN77_19490 SM00788 Adenylosuccinate synthetase CFN77_19510 SM00382 ATPases associated with a variety of cellular activities CFN77_19530 SM00822 CFN77_19530 CFN77_19550 SM00823 Phosphopantetheine attachment site CFN77_19555 SM00923 MbtH-like protein CFN77_19560 SM00342 helix_turn_helix, arabinose operon control protein CFN77_19590 SM00267 diguanylate cyclase CFN77_19600 SM01131 CFN77_19600 CFN77_19620 SM01060 CFN77_19620 CFN77_19645 SM00382 ATPases associated with a variety of cellular activities CFN77_19695 SM00470 ParB-like nuclease domain CFN77_19710 SM00470 ParB-like nuclease domain CFN77_19720 SM01228 CFN77_19720 CFN77_19730 SM00393 Putative single-stranded nucleic acids-binding domain CFN77_19730 SM01245 CFN77_19730 CFN77_19810 SM00966 SpoVT / AbrB like domain CFN77_19820 SM00347 helix_turn_helix multiple antibiotic resistance protein CFN77_19835 SM00028 Tetratricopeptide repeats CFN77_19890 SM00966 SpoVT / AbrB like domain