locus-tag class description TM2_00010 PF00308 Bacterial dnaA protein TM2_00010 PF08299 Bacterial dnaA protein helix-turn-helix TM2_00010 PF11638 DnaA N-terminal domain TM2_00020 PF00712 DNA polymerase III beta subunit, N-terminal domain TM2_00020 PF02767 DNA polymerase III beta subunit, central domain TM2_00020 PF02768 DNA polymerase III beta subunit, C-terminal domain TM2_00040 PF02463 RecF/RecN/SMC N terminal domain TM2_00050 PF04025 Domain of unknown function (DUF370) TM2_00060 PF01751 Toprim domain TM2_00060 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase TM2_00060 PF00986 DNA gyrase B subunit, carboxyl terminus TM2_00060 PF00204 DNA gyrase B TM2_00070 PF03989 DNA gyrase C-terminal domain, beta-propeller TM2_00070 PF00521 DNA gyrase/topoisomerase IV, subunit A TM2_00080 PF14175 YaaC-like Protein TM2_00090 PF00571 CBS domain TM2_00090 PF00478 IMP dehydrogenase / GMP reductase domain TM2_00100 PF07943 Penicillin-binding protein 5, C-terminal domain TM2_00100 PF00768 D-alanyl-D-alanine carboxypeptidase TM2_00110 PF00392 Bacterial regulatory proteins, gntR family TM2_00110 PF00155 Aminotransferase class I and II TM2_00120 PF01680 SOR/SNZ family TM2_00130 PF01174 SNO glutamine amidotransferase family TM2_00140 PF02403 Seryl-tRNA synthetase N-terminal domain TM2_00140 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) TM2_00150 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain TM2_00160 PF01712 Deoxynucleoside kinase TM2_00170 PF01712 Deoxynucleoside kinase TM2_00180 PF01476 LysM domain TM2_00180 PF00704 Glycosyl hydrolases family 18 TM2_00190 PF00857 Isochorismatase family TM2_00200 PF14437 MafB19-like deaminase TM2_00210 PF12169 DNA polymerase III subunits gamma and tau domain III TM2_00220 PF02575 YbaB/EbfC DNA-binding family TM2_00230 PF02132 RecR protein TM2_00230 PF13662 Toprim domain TM2_00240 PF10704 Protein of unknown function (DUF2508) TM2_00250 PF07441 SigmaK-factor processing regulatory protein BofA TM2_00260 PF10764 Inhibitor of sigma-G Gin TM2_00270 PF10112 5-bromo-4-chloroindolyl phosphate hydrolysis protein TM2_00280 PF05816 Toxic anion resistance protein (TelA) TM2_00290 PF01276 Orn/Lys/Arg decarboxylase, major domain TM2_00290 PF03711 Orn/Lys/Arg decarboxylase, C-terminal domain TM2_00300 PF02223 Thymidylate kinase TM2_00310 PF06153 Cyclic-di-AMP receptor TM2_00320 PF03885 Protein of unknown function (DUF327) TM2_00330 PF09115 DNA polymerase III, delta subunit, C terminal TM2_00340 PF04468 PSP1 C-terminal conserved region TM2_00350 PF06156 Initiation control protein YabA TM2_00360 PF05175 Methyltransferase small domain TM2_00370 PF01541 GIY-YIG catalytic domain TM2_00380 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases TM2_00390 PF18277 AbrB C-terminal domain TM2_00390 PF04014 Antidote-toxin recognition MazE, bacterial antitoxin TM2_00400 PF08264 Anticodon-binding domain of tRNA TM2_00400 PF09334 tRNA synthetases class I (M) TM2_00400 PF01588 Putative tRNA binding domain TM2_00410 PF01026 TatD related DNase TM2_00420 PF07501 G5 domain TM2_00420 PF06725 3D domain TM2_00420 PF03990 G5-linked-Ubiquitin-like domain TM2_00430 PF13331 Domain of unknown function (DUF4093) TM2_00430 PF13662 Toprim domain TM2_00440 PF00398 Ribosomal RNA adenine dimethylase TM2_00450 PF05582 YabG peptidase U57 TM2_00460 PF06257 Biofilm formation stimulator VEG TM2_00470 PF00269 Small, acid-soluble spore proteins, alpha/beta type TM2_00480 PF08544 GHMP kinases C terminal TM2_00480 PF00288 GHMP kinases N terminal domain TM2_00490 PF00156 Phosphoribosyl transferase domain TM2_00490 PF09182 Bacterial purine repressor, N-terminal TM2_00500 PF01042 Endoribonuclease L-PSP TM2_00510 PF04026 SpoVG TM2_00520 PF00132 Bacterial transferase hexapeptide (six repeats) TM2_00520 PF00483 Nucleotidyl transferase TM2_00530 PF14572 Phosphoribosyl synthetase-associated domain TM2_00530 PF13793 N-terminal domain of ribose phosphate pyrophosphokinase TM2_00540 PF01386 Ribosomal L25p family TM2_00540 PF14693 Ribosomal protein TL5, C-terminal domain TM2_00550 PF01195 Peptidyl-tRNA hydrolase TM2_00560 PF10955 Protein of unknown function (DUF2757) TM2_00570 PF00271 Helicase conserved C-terminal domain TM2_00570 PF00270 DEAD/DEAH box helicase TM2_00570 PF03461 TRCF domain TM2_00570 PF02559 CarD-like/TRCF domain TM2_00570 PF17757 UvrB interaction domain TM2_00580 PF04014 Antidote-toxin recognition MazE, bacterial antitoxin TM2_00580 PF15714 Stage V sporulation protein T C-terminal, transcription factor TM2_00590 PF01943 Polysaccharide biosynthesis protein TM2_00590 PF14667 Polysaccharide biosynthesis C-terminal domain TM2_00600 PF03819 MazG nucleotide pyrophosphohydrolase domain TM2_00600 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases TM2_00610 PF01479 S4 domain TM2_00620 PF07873 YabP family TM2_00630 PF04977 Septum formation initiator TM2_00640 PF00575 S1 RNA binding domain TM2_00650 PF07228 Stage II sporulation protein E (SpoIIE) TM2_00660 PF00092 von Willebrand factor type A domain TM2_00670 PF00069 Protein kinase domain TM2_00680 PF01171 PP-loop family TM2_00680 PF09179 TilS substrate binding domain TM2_00680 PF11734 TilS substrate C-terminal domain TM2_00690 PF00156 Phosphoribosyl transferase domain TM2_00700 PF00004 ATPase family associated with various cellular activities (AAA) TM2_00700 PF06480 FtsH Extracellular TM2_00700 PF17862 AAA+ lid domain TM2_00700 PF01434 Peptidase family M41 TM2_00710 PF03309 Type III pantothenate kinase TM2_00720 PF01430 Hsp33 protein TM2_00730 PF13145 PPIC-type PPIASE domain TM2_00740 PF00291 Pyridoxal-phosphate dependent enzyme TM2_00750 PF04715 Anthranilate synthase component I, N terminal region TM2_00750 PF00425 chorismate binding enzyme TM2_00760 PF00117 Glutamine amidotransferase class-I TM2_00770 PF01063 Amino-transferase class IV TM2_00780 PF00809 Pterin binding enzyme TM2_00790 PF02152 Dihydroneopterin aldolase TM2_00800 PF01288 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK) TM2_00810 PF01381 Helix-turn-helix TM2_00820 PF01207 Dihydrouridine synthase (Dus) TM2_00830 PF01336 OB-fold nucleic acid binding domain TM2_00830 PF00152 tRNA synthetases class II (D, K and N) TM2_00840 PF17727 CtsR C-terminal dimerization domain TM2_00840 PF05848 CtsR N-terminal HTH domain TM2_00850 PF02151 UvrB/uvrC motif TM2_00860 PF00217 ATP:guanido phosphotransferase, C-terminal catalytic domain TM2_00870 PF10431 C-terminal, D2-small domain, of ClpB protein TM2_00870 PF02861 Clp amino terminal domain, pathogenicity island component TM2_00870 PF07724 AAA domain (Cdc48 subfamily) TM2_00870 PF17871 AAA lid domain TM2_00870 PF00004 ATPase family associated with various cellular activities (AAA) TM2_00880 PF18073 Rubredoxin metal binding domain TM2_00890 PF02457 DisA bacterial checkpoint controller nucleotide-binding TM2_00890 PF10635 DisA bacterial checkpoint controller linker region TM2_00910 PF01128 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase TM2_00920 PF02542 YgbB family TM2_00930 PF00749 tRNA synthetases class I (E and Q), catalytic domain TM2_00940 PF00132 Bacterial transferase hexapeptide (six repeats) TM2_00940 PF06426 Serine acetyltransferase, N-terminal TM2_00950 PF09190 DALR domain TM2_00950 PF01406 tRNA synthetases class I (C) catalytic domain TM2_00960 PF00636 Ribonuclease III domain TM2_00970 PF08032 RNA 2'-O ribose methyltransferase substrate binding TM2_00970 PF00588 SpoU rRNA Methylase family TM2_00980 PF05991 YacP-like NYN domain TM2_00990 PF08281 Sigma-70, region 4 TM2_00990 PF04542 Sigma-70 region 2 TM2_01000 PF00584 SecE/Sec61-gamma subunits of protein translocation complex TM2_01010 PF00467 KOW motif TM2_01010 PF02357 Transcription termination factor nusG TM2_01020 PF00298 Ribosomal protein L11, RNA binding domain TM2_01020 PF03946 Ribosomal protein L11, N-terminal domain TM2_01030 PF00687 Ribosomal protein L1p/L10e family TM2_01040 PF00466 Ribosomal protein L10 TM2_01050 PF00542 Ribosomal protein L7/L12 C-terminal domain TM2_01050 PF16320 Ribosomal protein L7/L12 dimerisation domain TM2_01060 PF05175 Methyltransferase small domain TM2_01070 PF04563 RNA polymerase beta subunit TM2_01070 PF04561 RNA polymerase Rpb2, domain 2 TM2_01070 PF04565 RNA polymerase Rpb2, domain 3 TM2_01070 PF10385 RNA polymerase beta subunit external 1 domain TM2_01070 PF00562 RNA polymerase Rpb2, domain 6 TM2_01070 PF04560 RNA polymerase Rpb2, domain 7 TM2_01080 PF00623 RNA polymerase Rpb1, domain 2 TM2_01080 PF04997 RNA polymerase Rpb1, domain 1 TM2_01080 PF04998 RNA polymerase Rpb1, domain 5 TM2_01080 PF04983 RNA polymerase Rpb1, domain 3 TM2_01080 PF05000 RNA polymerase Rpb1, domain 4 TM2_01090 PF01248 Ribosomal protein L7Ae/L30e/S12e/Gadd45 family TM2_01100 PF00164 Ribosomal protein S12/S23 TM2_01110 PF00177 Ribosomal protein S7p/S5e TM2_01120 PF03764 Elongation factor G, domain IV TM2_01120 PF14492 Elongation Factor G, domain II TM2_01120 PF00009 Elongation factor Tu GTP binding domain TM2_01120 PF00679 Elongation factor G C-terminus TM2_01120 PF03144 Elongation factor Tu domain 2 TM2_01130 PF03144 Elongation factor Tu domain 2 TM2_01130 PF00009 Elongation factor Tu GTP binding domain TM2_01130 PF03143 Elongation factor Tu C-terminal domain TM2_01140 PF12146 Serine aminopeptidase, S33 TM2_01150 PF00338 Ribosomal protein S10p/S20e TM2_01160 PF00297 Ribosomal protein L3 TM2_01170 PF00573 Ribosomal protein L4/L1 family TM2_01180 PF00276 Ribosomal protein L23 TM2_01190 PF03947 Ribosomal Proteins L2, C-terminal domain TM2_01190 PF00181 Ribosomal Proteins L2, RNA binding domain TM2_01200 PF00203 Ribosomal protein S19 TM2_01210 PF00237 Ribosomal protein L22p/L17e TM2_01220 PF07650 KH domain TM2_01220 PF00189 Ribosomal protein S3, C-terminal domain TM2_01230 PF00252 Ribosomal protein L16p/L10e TM2_01240 PF00831 Ribosomal L29 protein TM2_01250 PF00366 Ribosomal protein S17 TM2_01260 PF00238 Ribosomal protein L14p/L23e TM2_01270 PF17136 Ribosomal proteins 50S L24/mitochondrial 39S L24 TM2_01270 PF00467 KOW motif TM2_01280 PF00673 ribosomal L5P family C-terminus TM2_01280 PF00281 Ribosomal protein L5 TM2_01290 PF00253 Ribosomal protein S14p/S29e TM2_01300 PF00410 Ribosomal protein S8 TM2_01310 PF00347 Ribosomal protein L6 TM2_01320 PF00861 Ribosomal L18 of archaea, bacteria, mitoch. and chloroplast TM2_01330 PF00333 Ribosomal protein S5, N-terminal domain TM2_01330 PF03719 Ribosomal protein S5, C-terminal domain TM2_01340 PF00327 Ribosomal protein L30p/L7e TM2_01350 PF00828 Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27A TM2_01360 PF00344 SecY translocase TM2_01370 PF05191 Adenylate kinase, active site lid TM2_01380 PF00557 Metallopeptidase family M24 TM2_01390 PF01176 Translation initiation factor 1A / IF-1 TM2_01400 PF00444 Ribosomal protein L36 TM2_01410 PF00416 Ribosomal protein S13/S18 TM2_01420 PF00411 Ribosomal protein S11 TM2_01430 PF01000 RNA polymerase Rpb3/RpoA insert domain TM2_01430 PF03118 Bacterial RNA polymerase, alpha chain C terminal domain TM2_01430 PF01193 RNA polymerase Rpb3/Rpb11 dimerisation domain TM2_01440 PF01196 Ribosomal protein L17 TM2_01450 PF00005 ABC transporter TM2_01460 PF00005 ABC transporter TM2_01470 PF02361 Cobalt transport protein TM2_01480 PF01416 tRNA pseudouridine synthase TM2_01490 PF00572 Ribosomal protein L13 TM2_01500 PF00380 Ribosomal protein S9/S16 TM2_01510 PF13302 Acetyltransferase (GNAT) domain TM2_01550 PF10730 Protein of unknown function (DUF2521) TM2_01560 PF01520 N-acetylmuramoyl-L-alanine amidase TM2_01570 PF10609 NUBPL iron-transfer P-loop NTPase TM2_01580 PF17898 Spore germination GerD central core domain TM2_01590 PF14089 KinB-signalling pathway activation in sporulation TM2_01600 PF01522 Polysaccharide deacetylase TM2_01630 PF00669 Bacterial flagellin N-terminal helical region TM2_01630 PF00700 Bacterial flagellin C-terminal helical region TM2_01640 PF00916 Sulfate permease family TM2_01640 PF01740 STAS domain TM2_01650 PF01758 Sodium Bile acid symporter family TM2_01660 PF07075 Protein of unknown function (DUF1343) TM2_01670 PF01915 Glycosyl hydrolase family 3 C-terminal domain TM2_01670 PF00933 Glycosyl hydrolase family 3 N terminal domain TM2_01680 PF00144 Beta-lactamase TM2_01690 PF00367 phosphotransferase system, EIIB TM2_01690 PF02378 Phosphotransferase system, EIIC TM2_01700 PF01418 Helix-turn-helix domain, rpiR family TM2_01700 PF01380 SIS domain TM2_01710 PF13580 SIS domain TM2_01720 PF00491 Arginase family TM2_01730 PF08281 Sigma-70, region 4 TM2_01730 PF04542 Sigma-70 region 2 TM2_01740 PF13490 Putative zinc-finger TM2_01750 PF02457 DisA bacterial checkpoint controller nucleotide-binding TM2_01760 PF07949 YbbR-like protein TM2_01770 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I TM2_01770 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II TM2_01770 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III TM2_01770 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain TM2_01780 PF01380 SIS domain TM2_01820 PF13732 Domain of unknown function (DUF4162) TM2_01820 PF00005 ABC transporter TM2_01840 PF02687 FtsX-like permease family TM2_01840 PF12704 MacB-like periplasmic core domain TM2_01840 PF00005 ABC transporter TM2_01850 PF00005 ABC transporter TM2_01850 PF02687 FtsX-like permease family TM2_01850 PF12704 MacB-like periplasmic core domain TM2_01860 PF10400 Virulence activator alpha C-term TM2_01860 PF03551 Transcriptional regulator PadR-like family TM2_01880 PF00005 ABC transporter TM2_01920 PF13905 Thioredoxin-like TM2_01940 PF04235 Protein of unknown function (DUF418) TM2_01960 PF00005 ABC transporter TM2_01980 PF01381 Helix-turn-helix TM2_02000 PF00561 alpha/beta hydrolase fold TM2_02010 PF12833 Helix-turn-helix domain TM2_02040 PF00005 ABC transporter TM2_02080 PF00324 Amino acid permease TM2_02090 PF03009 Glycerophosphoryl diester phosphodiesterase family TM2_02100 PF07690 Major Facilitator Superfamily TM2_02120 PF03190 Protein of unknown function, DUF255 TM2_02130 PF00109 Beta-ketoacyl synthase, N-terminal domain TM2_02130 PF02801 Beta-ketoacyl synthase, C-terminal domain TM2_02160 PF00005 ABC transporter TM2_02220 PF02583 Metal-sensitive transcriptional repressor TM2_02230 PF13686 DsrE/DsrF/DrsH-like family TM2_02250 PF00581 Rhodanese-like domain TM2_02250 PF01206 Sulfurtransferase TusA TM2_02260 PF00753 Metallo-beta-lactamase superfamily TM2_02260 PF00581 Rhodanese-like domain TM2_02270 PF01206 Sulfurtransferase TusA TM2_02280 PF01925 Sulfite exporter TauE/SafE TM2_02290 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) TM2_02290 PF09180 Prolyl-tRNA synthetase, C-terminal TM2_02290 PF03129 Anticodon binding domain TM2_02300 PF07690 Major Facilitator Superfamily TM2_02330 PF01047 MarR family TM2_02340 PF04463 Protein of unknown function (DUF523) TM2_02360 PF00248 Aldo/keto reductase family TM2_02370 PF00465 Iron-containing alcohol dehydrogenase TM2_02380 PF00581 Rhodanese-like domain TM2_02380 PF17773 UPF0176 acylphosphatase like domain TM2_02380 PF12368 Rhodanase C-terminal TM2_02390 PF13520 Amino acid permease TM2_02410 PF00874 PRD domain TM2_02410 PF03123 CAT RNA binding domain TM2_02420 PF02378 Phosphotransferase system, EIIC TM2_02420 PF00367 phosphotransferase system, EIIB TM2_02420 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 TM2_02430 PF00232 Glycosyl hydrolase family 1 TM2_02460 PF00874 PRD domain TM2_02460 PF05043 Mga helix-turn-helix domain TM2_02460 PF08279 HTH domain TM2_02460 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 TM2_02470 PF00480 ROK family TM2_02480 PF09261 Alpha mannosidase middle domain TM2_02480 PF01074 Glycosyl hydrolases family 38 N-terminal domain TM2_02480 PF07748 Glycosyl hydrolases family 38 C-terminal domain TM2_02500 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit TM2_02510 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 TM2_02510 PF00381 PTS HPr component phosphorylation site TM2_02520 PF00082 Subtilase family TM2_02520 PF17936 Bacterial Ig domain TM2_02550 PF00324 Amino acid permease TM2_02560 PF02574 Homocysteine S-methyltransferase TM2_02570 PF10035 Uncharacterized protein conserved in bacteria (DUF2179) TM2_02570 PF02588 Uncharacterised 5xTM membrane BCR, YitT family COG1284 TM2_02580 PF03551 Transcriptional regulator PadR-like family TM2_02610 PF07690 Major Facilitator Superfamily TM2_02620 PF00583 Acetyltransferase (GNAT) family TM2_02650 PF00082 Subtilase family TM2_02660 PF01425 Amidase TM2_02670 PF00440 Bacterial regulatory proteins, tetR family TM2_02680 PF07883 Cupin domain TM2_02690 PF01047 MarR family TM2_02700 PF13193 AMP-binding enzyme C-terminal domain TM2_02700 PF00501 AMP-binding enzyme TM2_02710 PF13520 Amino acid permease TM2_02730 PF00561 alpha/beta hydrolase fold TM2_02740 PF01235 Sodium:alanine symporter family TM2_02750 PF04960 Glutaminase TM2_02760 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase TM2_02770 PF08664 YcbB domain TM2_02770 PF00072 Response regulator receiver domain TM2_02780 PF05225 helix-turn-helix, Psq domain TM2_02780 PF02810 SEC-C motif TM2_02790 PF11611 Domain of unknown function (DUF4352) TM2_02790 PF17118 Domain of unknown function (DUF5105) TM2_02800 PF00248 Aldo/keto reductase family TM2_02810 PF14501 GHKL domain TM2_02820 PF04397 LytTr DNA-binding domain TM2_02820 PF00072 Response regulator receiver domain TM2_02830 PF00005 ABC transporter TM2_02840 PF12679 ABC-2 family transporter protein TM2_02870 PF11611 Domain of unknown function (DUF4352) TM2_02870 PF17118 Domain of unknown function (DUF5105) TM2_02880 PF07486 Cell Wall Hydrolase TM2_02910 PF00296 Luciferase-like monooxygenase TM2_02920 PF02342 TerD domain TM2_02930 PF02342 TerD domain TM2_02940 PF02342 TerD domain TM2_02950 PF03741 Integral membrane protein TerC family TM2_03000 PF14266 Putative component of 'biosynthetic module' TM2_03010 PF05816 Toxic anion resistance protein (TelA) TM2_03020 PF00571 CBS domain TM2_03020 PF00005 ABC transporter TM2_03030 PF00528 Binding-protein-dependent transport system inner membrane component TM2_03040 PF04069 Substrate binding domain of ABC-type glycine betaine transport system TM2_03070 PF01546 Peptidase family M20/M25/M40 TM2_03070 PF07687 Peptidase dimerisation domain TM2_03080 PF03606 C4-dicarboxylate anaerobic carrier TM2_03090 PF02866 lactate/malate dehydrogenase, alpha/beta C-terminal domain TM2_03090 PF00056 lactate/malate dehydrogenase, NAD binding domain TM2_03100 PF02652 L-lactate permease TM2_03110 PF00356 Bacterial regulatory proteins, lacI family TM2_03120 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family TM2_03130 PF05116 Sucrose-6F-phosphate phosphohydrolase TM2_03140 PF01408 Oxidoreductase family, NAD-binding Rossmann fold TM2_03140 PF02894 Oxidoreductase family, C-terminal alpha/beta domain TM2_03150 PF07690 Major Facilitator Superfamily TM2_03160 PF01810 LysE type translocator TM2_03180 PF08892 YqcI/YcgG family TM2_03190 PF00324 Amino acid permease TM2_03200 PF09347 Domain of unknown function (DUF1989) TM2_03210 PF02540 NAD synthase TM2_03230 PF00171 Aldehyde dehydrogenase family TM2_03240 PF01487 Type I 3-dehydroquinase TM2_03250 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain TM2_03250 PF00205 Thiamine pyrophosphate enzyme, central domain TM2_03250 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain TM2_03270 PF02515 CoA-transferase family III TM2_03280 PF07690 Major Facilitator Superfamily TM2_03300 PF09339 IclR helix-turn-helix domain TM2_03300 PF01614 Bacterial transcriptional regulator TM2_03310 PF01202 Shikimate kinase TM2_03320 PF00701 Dihydrodipicolinate synthetase family TM2_03330 PF00356 Bacterial regulatory proteins, lacI family TM2_03340 PF07690 Major Facilitator Superfamily TM2_03350 PF08241 Methyltransferase domain TM2_03360 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family TM2_03360 PF03466 LysR substrate binding domain TM2_03370 PF00795 Carbon-nitrogen hydrolase TM2_03380 PF05448 Acetyl xylan esterase (AXE1) TM2_03400 PF10127 RNA repair pathway DNA polymerase beta family TM2_03410 PF01619 Proline dehydrogenase TM2_03420 PF00171 Aldehyde dehydrogenase family TM2_03430 PF13556 PucR C-terminal helix-turn-helix domain TM2_03430 PF17853 GGDEF-like domain TM2_03440 PF02040 Arsenical pump membrane protein TM2_03450 PF00528 Binding-protein-dependent transport system inner membrane component TM2_03460 PF00497 Bacterial extracellular solute-binding proteins, family 3 TM2_03470 PF10925 Protein of unknown function (DUF2680) TM2_03480 PF12706 Beta-lactamase superfamily domain TM2_03490 PF01037 Lrp/AsnC ligand binding domain TM2_03500 PF02522 Aminoglycoside 3-N-acetyltransferase TM2_03510 PF11033 Competence protein J (ComJ) TM2_03520 PF00672 HAMP domain TM2_03520 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain TM2_03520 PF17202 Single cache domain 3 TM2_03530 PF14040 Deoxyribonuclease NucA/NucB TM2_03540 PF01968 Hydantoinase/oxoprolinase TM2_03540 PF05378 Hydantoinase/oxoprolinase N-terminal region TM2_03570 PF08402 TOBE domain TM2_03570 PF00005 ABC transporter TM2_03580 PF00528 Binding-protein-dependent transport system inner membrane component TM2_03590 PF00528 Binding-protein-dependent transport system inner membrane component TM2_03600 PF00550 Phosphopantetheine attachment site TM2_03600 PF00668 Condensation domain TM2_03600 PF00501 AMP-binding enzyme TM2_03600 PF13193 AMP-binding enzyme C-terminal domain TM2_03610 PF00501 AMP-binding enzyme TM2_03610 PF13193 AMP-binding enzyme C-terminal domain TM2_03610 PF00668 Condensation domain TM2_03610 PF00550 Phosphopantetheine attachment site TM2_03620 PF13193 AMP-binding enzyme C-terminal domain TM2_03620 PF00550 Phosphopantetheine attachment site TM2_03620 PF00975 Thioesterase domain TM2_03620 PF00501 AMP-binding enzyme TM2_03620 PF00668 Condensation domain TM2_03630 PF13193 AMP-binding enzyme C-terminal domain TM2_03630 PF00668 Condensation domain TM2_03630 PF00550 Phosphopantetheine attachment site TM2_03630 PF00501 AMP-binding enzyme TM2_03640 PF00501 AMP-binding enzyme TM2_03640 PF00550 Phosphopantetheine attachment site TM2_03640 PF13193 AMP-binding enzyme C-terminal domain TM2_03640 PF00668 Condensation domain TM2_03650 PF00975 Thioesterase domain TM2_03660 PF00892 EamA-like transporter family TM2_03670 PF00155 Aminotransferase class I and II TM2_03670 PF00392 Bacterial regulatory proteins, gntR family TM2_03680 PF01648 4'-phosphopantetheinyl transferase superfamily TM2_03690 PF06445 GyrI-like small molecule binding domain TM2_03690 PF12833 Helix-turn-helix domain TM2_03720 PF00005 ABC transporter TM2_03730 PF00528 Binding-protein-dependent transport system inner membrane component TM2_03740 PF00497 Bacterial extracellular solute-binding proteins, family 3 TM2_03750 PF01738 Dienelactone hydrolase family TM2_03760 PF00324 Amino acid permease TM2_03770 PF00854 POT family TM2_03780 PF12708 Pectate lyase superfamily protein TM2_03780 PF13229 Right handed beta helix region TM2_03790 PF00296 Luciferase-like monooxygenase TM2_03800 PF00583 Acetyltransferase (GNAT) family TM2_03810 PF00497 Bacterial extracellular solute-binding proteins, family 3 TM2_03820 PF00528 Binding-protein-dependent transport system inner membrane component TM2_03830 PF00005 ABC transporter TM2_03840 PF07687 Peptidase dimerisation domain TM2_03840 PF01546 Peptidase family M20/M25/M40 TM2_03850 PF03972 MmgE/PrpD family TM2_03870 PF00072 Response regulator receiver domain TM2_03870 PF00486 Transcriptional regulatory protein, C terminal TM2_03880 PF00672 HAMP domain TM2_03880 PF00512 His Kinase A (phospho-acceptor) domain TM2_03880 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase TM2_03890 PF01740 STAS domain TM2_03890 PF14361 RsbT co-antagonist protein rsbRD N-terminal domain TM2_03900 PF00696 Amino acid kinase family TM2_03900 PF13840 ACT domain TM2_03910 PF07690 Major Facilitator Superfamily TM2_03920 PF00440 Bacterial regulatory proteins, tetR family TM2_03940 PF01022 Bacterial regulatory protein, arsR family TM2_03960 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family TM2_03960 PF03466 LysR substrate binding domain TM2_03970 PF00155 Aminotransferase class I and II TM2_03970 PF00392 Bacterial regulatory proteins, gntR family TM2_03980 PF00202 Aminotransferase class-III TM2_03990 PF13520 Amino acid permease TM2_04000 PF00171 Aldehyde dehydrogenase family TM2_04010 PF02525 Flavodoxin-like fold TM2_04020 PF07987 Domain of unkown function (DUF1775) TM2_04030 PF04234 CopC domain TM2_04030 PF05425 Copper resistance protein D TM2_04030 PF13115 YtkA-like TM2_04040 PF02378 Phosphotransferase system, EIIC TM2_04040 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit TM2_04050 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 TM2_04060 PF01232 Mannitol dehydrogenase Rossmann domain TM2_04060 PF08125 Mannitol dehydrogenase C-terminal domain TM2_04070 PF02743 Cache domain TM2_04070 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain TM2_04070 PF00672 HAMP domain TM2_04140 PF12681 Glyoxalase-like domain TM2_04150 PF05901 Excalibur calcium-binding domain TM2_04170 PF03746 LamB/YcsF family TM2_04180 PF01566 Natural resistance-associated macrophage protein TM2_04190 PF07286 Protein of unknown function (DUF1445) TM2_04200 PF02682 Carboxyltransferase domain, subdomain C and D TM2_04210 PF02626 Carboxyltransferase domain, subdomain A and B TM2_04220 PF09339 IclR helix-turn-helix domain TM2_04220 PF01614 Bacterial transcriptional regulator TM2_04230 PF02525 Flavodoxin-like fold TM2_04240 PF13472 GDSL-like Lipase/Acylhydrolase family TM2_04260 PF08279 HTH domain TM2_04260 PF00874 PRD domain TM2_04260 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 TM2_04260 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit TM2_04260 PF05043 Mga helix-turn-helix domain TM2_04270 PF13649 Methyltransferase domain TM2_04290 PF16242 Pyridoxamine 5'-phosphate oxidase like TM2_04320 PF12823 Domain of unknown function (DUF3817) TM2_04330 PF07729 FCD domain TM2_04330 PF00392 Bacterial regulatory proteins, gntR family TM2_04340 PF02311 AraC-like ligand binding domain TM2_04340 PF12833 Helix-turn-helix domain TM2_04350 PF00892 EamA-like transporter family TM2_04360 PF00180 Isocitrate/isopropylmalate dehydrogenase TM2_04370 PF01751 Toprim domain TM2_04370 PF01131 DNA topoisomerase TM2_04390 PF00990 Diguanylate cyclase, GGDEF domain TM2_04400 PF10096 Uncharacterized protein conserved in bacteria (DUF2334) TM2_04420 PF03170 Bacterial cellulose synthase subunit TM2_04440 PF13520 Amino acid permease TM2_04450 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain TM2_04450 PF00205 Thiamine pyrophosphate enzyme, central domain TM2_04450 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain TM2_04460 PF14410 HNH/ENDO VII superfamily nuclease with conserved GHE residues TM2_04460 PF04740 LXG domain of WXG superfamily TM2_04460 PF14449 Pre-toxin TG TM2_04500 PF13302 Acetyltransferase (GNAT) domain TM2_04510 PF01566 Natural resistance-associated macrophage protein TM2_04520 PF04226 Transglycosylase associated protein TM2_04530 PF12787 EcsC protein family TM2_04540 PF03480 Bacterial extracellular solute-binding protein, family 7 TM2_04550 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase TM2_04550 PF17203 Single cache domain 3 TM2_04550 PF14689 Sensor_kinase_SpoOB-type, alpha-helical domain TM2_04560 PF08279 HTH domain TM2_04560 PF00072 Response regulator receiver domain TM2_04570 PF00375 Sodium:dicarboxylate symporter family TM2_04580 PF01594 AI-2E family transporter TM2_04590 PF00375 Sodium:dicarboxylate symporter family TM2_04600 PF00005 ABC transporter TM2_04630 PF13040 Fur-regulated basic protein B TM2_04640 PF00085 Thioredoxin TM2_04650 PF07478 D-ala D-ala ligase C-terminus TM2_04650 PF01820 D-ala D-ala ligase N-terminus TM2_04660 PF08245 Mur ligase middle domain TM2_04660 PF01225 Mur ligase family, catalytic domain TM2_04660 PF02875 Mur ligase family, glutamate ligase domain TM2_04670 PF12146 Serine aminopeptidase, S33 TM2_04690 PF00270 DEAD/DEAH box helicase TM2_04690 PF00271 Helicase conserved C-terminal domain TM2_04700 PF03703 Bacterial PH domain TM2_04710 PF03703 Bacterial PH domain TM2_04720 PF01694 Rhomboid family TM2_04730 PF01648 4'-phosphopantetheinyl transferase superfamily TM2_04750 PF00842 Alanine racemase, C-terminal domain TM2_04750 PF01168 Alanine racemase, N-terminal domain TM2_04760 PF01402 Ribbon-helix-helix protein, copG family TM2_04770 PF02452 PemK-like, MazF-like toxin of type II toxin-antitoxin system TM2_04780 PF01740 STAS domain TM2_04780 PF08678 Rsbr N terminal TM2_04790 PF01740 STAS domain TM2_04800 PF13581 Histidine kinase-like ATPase domain TM2_04810 PF08673 Phosphoserine phosphatase RsbU, N-terminal domain TM2_04810 PF07228 Stage II sporulation protein E (SpoIIE) TM2_04820 PF01740 STAS domain TM2_04830 PF13581 Histidine kinase-like ATPase domain TM2_04840 PF04542 Sigma-70 region 2 TM2_04840 PF04539 Sigma-70 region 3 TM2_04840 PF04545 Sigma-70, region 4 TM2_04850 PF07228 Stage II sporulation protein E (SpoIIE) TM2_04860 PF00575 S1 RNA binding domain TM2_04860 PF17674 HHH domain TM2_04860 PF09371 Tex-like protein N-terminal domain TM2_04860 PF16921 Tex protein YqgF-like domain TM2_04870 PF17283 SprT-like zinc ribbon domain TM2_04870 PF10263 SprT-like family TM2_04880 PF00676 Dehydrogenase E1 component TM2_04890 PF02779 Transketolase, pyrimidine binding domain TM2_04890 PF02780 Transketolase, C-terminal domain TM2_04900 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) TM2_04900 PF02817 e3 binding domain TM2_04900 PF00364 Biotin-requiring enzyme TM2_04910 PF07992 Pyridine nucleotide-disulphide oxidoreductase TM2_04910 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain TM2_04920 PF00158 Sigma-54 interaction domain TM2_04920 PF01590 GAF domain TM2_04920 PF02954 Bacterial regulatory protein, Fis family TM2_04940 PF00313 'Cold-shock' DNA-binding domain TM2_04970 PF02378 Phosphotransferase system, EIIC TM2_04970 PF00367 phosphotransferase system, EIIB TM2_04970 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 TM2_04980 PF04794 YdjC-like protein TM2_04990 PF03123 CAT RNA binding domain TM2_04990 PF00874 PRD domain TM2_05000 PF08240 Alcohol dehydrogenase GroES-like domain TM2_05000 PF00107 Zinc-binding dehydrogenase TM2_05010 PF13411 MerR HTH family regulatory protein TM2_05020 PF00722 Glycosyl hydrolases family 16 TM2_05040 PF00440 Bacterial regulatory proteins, tetR family TM2_05050 PF07690 Major Facilitator Superfamily TM2_05060 PF07859 alpha/beta hydrolase fold TM2_05080 PF00106 short chain dehydrogenase TM2_05090 PF00710 Asparaginase, N-terminal TM2_05090 PF17763 Glutaminase/Asparaginase C-terminal domain TM2_05100 PF12697 Alpha/beta hydrolase family TM2_05120 PF16925 Tetracyclin repressor-like, C-terminal domain TM2_05120 PF00440 Bacterial regulatory proteins, tetR family TM2_05130 PF07690 Major Facilitator Superfamily TM2_05210 PF00583 Acetyltransferase (GNAT) family TM2_05220 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily TM2_05240 PF00440 Bacterial regulatory proteins, tetR family TM2_05250 PF01872 RibD C-terminal domain TM2_05260 PF01047 MarR family TM2_05270 PF00881 Nitroreductase family TM2_05300 PF07883 Cupin domain TM2_05300 PF01381 Helix-turn-helix TM2_05310 PF01810 LysE type translocator TM2_05320 PF00583 Acetyltransferase (GNAT) family TM2_05340 PF01596 O-methyltransferase TM2_05360 PF03591 AzlC protein TM2_05370 PF00892 EamA-like transporter family TM2_05390 PF00375 Sodium:dicarboxylate symporter family TM2_05410 PF02769 AIR synthase related protein, C-terminal domain TM2_05410 PF00586 AIR synthase related protein, N-terminal domain TM2_05420 PF02367 Threonylcarbamoyl adenosine biosynthesis protein TsaE TM2_05430 PF00814 Glycoprotease family TM2_05440 PF00583 Acetyltransferase (GNAT) family TM2_05450 PF00814 Glycoprotease family TM2_05460 PF16326 ABC transporter C-terminal domain TM2_05460 PF00005 ABC transporter TM2_05460 PF12848 ABC transporter TM2_05470 PF01967 MoaC family TM2_05480 PF02629 CoA binding domain TM2_05480 PF06971 Putative DNA-binding protein N-terminus TM2_05490 PF02416 mttA/Hcf106 family TM2_05500 PF00902 Sec-independent protein translocase protein (TatC) TM2_05520 PF14146 Domain of unknown function (DUF4305) TM2_05530 PF02517 CPBP intramembrane metalloprotease TM2_05540 PF00166 Chaperonin 10 Kd subunit TM2_05550 PF00118 TCP-1/cpn60 chaperonin family TM2_05560 PF01047 MarR family TM2_05570 PF04299 Putative FMN-binding domain TM2_05580 PF02557 D-alanyl-D-alanine carboxypeptidase TM2_05630 PF03330 Lytic transglycolase TM2_05640 PF07676 WD40-like Beta Propeller Repeat TM2_05660 PF07731 Multicopper oxidase TM2_05660 PF00394 Multicopper oxidase TM2_05660 PF07732 Multicopper oxidase TM2_05670 PF00324 Amino acid permease TM2_05680 PF16916 Dimerisation domain of Zinc Transporter TM2_05680 PF01545 Cation efflux family TM2_05690 PF17863 AAA lid domain TM2_05690 PF07726 ATPase family associated with various cellular activities (AAA) TM2_05700 PF01882 Protein of unknown function DUF58 TM2_05710 PF11992 Domain of unknown function (DUF3488) TM2_05710 PF13559 Domain of unknown function (DUF4129) TM2_05710 PF01841 Transglutaminase-like superfamily TM2_05720 PF00958 GMP synthase C terminal domain TM2_05720 PF02540 NAD synthase TM2_05720 PF00117 Glutamine amidotransferase class-I TM2_05790 PF02486 Replication initiation factor TM2_05830 PF04073 Aminoacyl-tRNA editing domain TM2_05840 PF12833 Helix-turn-helix domain TM2_05850 PF08502 LeuA allosteric (dimerisation) domain TM2_05850 PF00682 HMGL-like TM2_05860 PF12833 Helix-turn-helix domain TM2_05890 PF13302 Acetyltransferase (GNAT) domain TM2_05920 PF08281 Sigma-70, region 4 TM2_05920 PF04542 Sigma-70 region 2 TM2_05940 PF07690 Major Facilitator Superfamily TM2_05950 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family TM2_05950 PF03466 LysR substrate binding domain TM2_05960 PF00860 Permease family TM2_05980 PF10055 Uncharacterized small protein (DUF2292) TM2_06000 PF10035 Uncharacterized protein conserved in bacteria (DUF2179) TM2_06010 PF14044 NETI protein TM2_06020 PF00731 AIR carboxylase TM2_06030 PF17769 Phosphoribosylaminoimidazole carboxylase C-terminal domain TM2_06030 PF02222 ATP-grasp domain TM2_06040 PF00206 Lyase TM2_06040 PF10397 Adenylosuccinate lyase C-terminus TM2_06050 PF01259 SAICAR synthetase TM2_06060 PF02700 Phosphoribosylformylglycinamidine (FGAM) synthase TM2_06080 PF18072 Formylglycinamide ribonucleotide amidotransferase linker domain TM2_06080 PF02769 AIR synthase related protein, C-terminal domain TM2_06080 PF00586 AIR synthase related protein, N-terminal domain TM2_06090 PF00156 Phosphoribosyl transferase domain TM2_06100 PF02769 AIR synthase related protein, C-terminal domain TM2_06100 PF00586 AIR synthase related protein, N-terminal domain TM2_06110 PF00551 Formyl transferase TM2_06120 PF02142 MGS-like domain TM2_06120 PF01808 AICARFT/IMPCHase bienzyme TM2_06130 PF02844 Phosphoribosylglycinamide synthetase, N domain TM2_06130 PF02843 Phosphoribosylglycinamide synthetase, C domain TM2_06130 PF01071 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain TM2_06180 PF00202 Aminotransferase class-III TM2_06190 PF01144 Coenzyme A transferase TM2_06200 PF01144 Coenzyme A transferase TM2_06210 PF01546 Peptidase family M20/M25/M40 TM2_06210 PF07687 Peptidase dimerisation domain TM2_06220 PF11127 Protein of unknown function (DUF2892) TM2_06230 PF13382 Adenine deaminase C-terminal domain TM2_06230 PF01979 Amidohydrolase family TM2_06240 PF01371 Trp repressor protein TM2_06260 PF01645 Conserved region in glutamate synthase TM2_06290 PF01884 PcrB family TM2_06300 PF00580 UvrD/REP helicase N-terminal domain TM2_06300 PF13361 UvrD-like helicase C-terminal domain TM2_06310 PF12826 Helix-hairpin-helix motif TM2_06310 PF03120 NAD-dependent DNA ligase OB-fold domain TM2_06310 PF01653 NAD-dependent DNA ligase adenylation domain TM2_06310 PF00533 BRCA1 C Terminus (BRCT) domain TM2_06310 PF03119 NAD-dependent DNA ligase C4 zinc finger domain TM2_06320 PF07537 CamS sex pheromone cAM373 precursor TM2_06330 PF01636 Phosphotransferase enzyme family TM2_06340 PF02308 MgtC family TM2_06350 PF00474 Sodium:solute symporter family TM2_06360 PF02686 Glu-tRNAGln amidotransferase C subunit TM2_06370 PF01425 Amidase TM2_06380 PF02637 GatB domain TM2_06380 PF02934 GatB/GatE catalytic domain TM2_06390 PF00440 Bacterial regulatory proteins, tetR family TM2_06400 PF00873 AcrB/AcrD/AcrF family TM2_06410 PF01156 Inosine-uridine preferring nucleoside hydrolase TM2_06420 PF00781 Diacylglycerol kinase catalytic domain TM2_06430 PF05958 tRNA (Uracil-5-)-methyltransferase TM2_06430 PF01938 TRAM domain TM2_06440 PF01207 Dihydrouridine synthase (Dus) TM2_06470 PF02082 Transcriptional regulator TM2_06480 PF07992 Pyridine nucleotide-disulphide oxidoreductase TM2_06510 PF13021 Domain of unknown function (DUF3885) TM2_06520 PF02056 Family 4 glycosyl hydrolase TM2_06520 PF11975 Family 4 glycosyl hydrolase C-terminal domain TM2_06530 PF01418 Helix-turn-helix domain, rpiR family TM2_06530 PF01380 SIS domain TM2_06540 PF07690 Major Facilitator Superfamily TM2_06560 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family TM2_06560 PF03466 LysR substrate binding domain TM2_06580 PF13037 Domain of unknown function (DUF3898) TM2_06580 PF13039 Protein of unknown function (DUF3900) TM2_06600 PF00483 Nucleotidyl transferase TM2_06610 PF16363 GDP-mannose 4,6 dehydratase TM2_06620 PF03407 Nucleotide-diphospho-sugar transferase TM2_06630 PF00535 Glycosyl transferase family 2 TM2_06640 PF03407 Nucleotide-diphospho-sugar transferase TM2_06650 PF07690 Major Facilitator Superfamily TM2_06660 PF05223 NTF2-like N-terminal transpeptidase domain TM2_06660 PF03717 Penicillin-binding Protein dimerisation domain TM2_06660 PF00905 Penicillin binding protein transpeptidase domain TM2_06670 PF00939 Sodium:sulfate symporter transmembrane region TM2_06700 PF00011 Hsp20/alpha crystallin family TM2_06730 PF13520 Amino acid permease TM2_06740 PF13181 Tetratricopeptide repeat TM2_06740 PF00535 Glycosyl transferase family 2 TM2_06750 PF12848 ABC transporter TM2_06750 PF16326 ABC transporter C-terminal domain TM2_06750 PF00005 ABC transporter TM2_06760 PF02649 Type I GTP cyclohydrolase folE2 TM2_06770 PF13411 MerR HTH family regulatory protein TM2_06780 PF07690 Major Facilitator Superfamily TM2_06790 PF00005 ABC transporter TM2_06790 PF12848 ABC transporter TM2_06800 PF00270 DEAD/DEAH box helicase TM2_06800 PF00271 Helicase conserved C-terminal domain TM2_06850 PF13333 Integrase core domain TM2_06850 PF00665 Integrase core domain TM2_06850 PF13276 HTH-like domain TM2_06860 PF00107 Zinc-binding dehydrogenase TM2_06860 PF16884 N-terminal domain of oxidoreductase TM2_06870 PF11486 Protein of unknown function (DUF3212) TM2_06880 PF11181 Heat induced stress protein YflT TM2_06900 PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase TM2_06900 PF00925 GTP cyclohydrolase II TM2_06910 PF03781 Sulfatase-modifying factor enzyme 1 TM2_06940 PF01872 RibD C-terminal domain TM2_06940 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region TM2_06960 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase TM2_06960 PF14689 Sensor_kinase_SpoOB-type, alpha-helical domain TM2_06970 PF12431 Transcriptional regulator TM2_06970 PF08279 HTH domain TM2_06970 PF00072 Response regulator receiver domain TM2_06980 PF03401 Tripartite tricarboxylate transporter family receptor TM2_06990 PF03600 Citrate transporter TM2_07010 PF05870 Phenolic acid decarboxylase (PAD) TM2_07020 PF10400 Virulence activator alpha C-term TM2_07020 PF03551 Transcriptional regulator PadR-like family TM2_07030 PF02898 Nitric oxide synthase, oxygenase domain TM2_07050 PF00708 Acylphosphatase TM2_07060 PF03475 3-alpha domain TM2_07060 PF03473 MOSC domain TM2_07070 PF11121 Protein of unknown function (DUF2639) TM2_07090 PF00557 Metallopeptidase family M24 TM2_07100 PF00367 phosphotransferase system, EIIB TM2_07100 PF02378 Phosphotransferase system, EIIC TM2_07110 PF05675 Protein of unknown function (DUF817) TM2_07120 PF16302 Domain of unknown function (DUF4944) TM2_07140 PF14172 Domain of unknown function (DUF4309) TM2_07150 PF00884 Sulfatase TM2_07160 PF00282 Pyridoxal-dependent decarboxylase conserved domain TM2_07170 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain TM2_07170 PF00672 HAMP domain TM2_07170 PF02743 Cache domain TM2_07180 PF09350 Domain of unknown function (DUF1992) TM2_07190 PF00367 phosphotransferase system, EIIB TM2_07190 PF02378 Phosphotransferase system, EIIC TM2_07200 PF00128 Alpha amylase, catalytic domain TM2_07200 PF16657 Maltogenic Amylase, C-terminal domain TM2_07210 PF07702 UTRA domain TM2_07210 PF00392 Bacterial regulatory proteins, gntR family TM2_07230 PF00149 Calcineurin-like phosphoesterase TM2_07230 PF02872 5'-nucleotidase, C-terminal domain TM2_07240 PF01965 DJ-1/PfpI family TM2_07250 PF06569 Protein of unknown function (DUF1128) TM2_07260 PF01235 Sodium:alanine symporter family TM2_07270 PF01451 Low molecular weight phosphotyrosine protein phosphatase TM2_07290 PF03631 Virulence factor BrkB TM2_07310 PF07690 Major Facilitator Superfamily TM2_07330 PF01699 Sodium/calcium exchanger protein TM2_07340 PF14167 YfkD-like protein TM2_07350 PF01709 Transcriptional regulator TM2_07370 PF00924 Mechanosensitive ion channel TM2_07380 PF08756 YfkB-like domain TM2_07380 PF04055 Radical SAM superfamily TM2_07400 PF01522 Polysaccharide deacetylase TM2_07430 PF01544 CorA-like Mg2+ transporter protein TM2_07450 PF00730 HhH-GPD superfamily base excision DNA repair protein TM2_07460 PF05958 tRNA (Uracil-5-)-methyltransferase TM2_07460 PF01938 TRAM domain TM2_07480 PF01555 DNA methylase TM2_07490 PF00145 C-5 cytosine-specific DNA methylase TM2_07500 PF07728 AAA domain (dynein-related subfamily) TM2_07540 PF07739 TipAS antibiotic-recognition domain TM2_07540 PF13411 MerR HTH family regulatory protein TM2_07550 PF07690 Major Facilitator Superfamily TM2_07580 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) TM2_07580 PF03129 Anticodon binding domain TM2_07580 PF02824 TGS domain TM2_07580 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain TM2_07670 PF00893 Small Multidrug Resistance protein TM2_07680 PF00893 Small Multidrug Resistance protein TM2_07690 PF17934 Tetracyclin repressor-like, C-terminal domain TM2_07690 PF00440 Bacterial regulatory proteins, tetR family TM2_07710 PF00657 GDSL-like Lipase/Acylhydrolase TM2_07720 PF07992 Pyridine nucleotide-disulphide oxidoreductase TM2_07730 PF02805 Metal binding domain of Ada TM2_07730 PF12833 Helix-turn-helix domain TM2_07740 PF01497 Periplasmic binding protein TM2_07750 PF00664 ABC transporter transmembrane region TM2_07750 PF00005 ABC transporter TM2_07760 PF02694 Uncharacterised BCR, YnfA/UPF0060 family TM2_07770 PF04545 Sigma-70, region 4 TM2_07770 PF04542 Sigma-70 region 2 TM2_07790 PF08240 Alcohol dehydrogenase GroES-like domain TM2_07790 PF00107 Zinc-binding dehydrogenase TM2_07800 PF12867 DinB superfamily TM2_07820 PF01047 MarR family TM2_07830 PF09924 Uncharacterised conserved protein (DUF2156) TM2_07830 PF03706 Lysylphosphatidylglycerol synthase TM region TM2_07860 PF18801 response regulator aspartate phosphatase H, N terminal TM2_07870 PF00881 Nitroreductase family TM2_07890 PF01370 NAD dependent epimerase/dehydratase family TM2_07890 PF08338 Domain of unknown function (DUF1731) TM2_07900 PF02631 RecX family TM2_07910 PF08838 Protein of unknown function (DUF1811) TM2_07930 PF08176 Small acid-soluble spore protein K family TM2_07940 PF14043 WVELL protein TM2_07950 PF00535 Glycosyl transferase family 2 TM2_07960 PF09586 Bacterial membrane protein YfhO TM2_07970 PF01494 FAD binding domain TM2_07990 PF00190 Cupin TM2_08000 PF12841 YvrJ protein family TM2_08010 PF04545 Sigma-70, region 4 TM2_08030 PF04307 LexA-binding, inner membrane-associated putative hydrolase TM2_08040 PF00730 HhH-GPD superfamily base excision DNA repair protein TM2_08040 PF14815 NUDIX domain TM2_08070 PF04259 Small, acid-soluble spore protein, gamma-type TM2_08090 PF04167 Protein of unknown function (DUF402) TM2_08100 PF00664 ABC transporter transmembrane region TM2_08100 PF00005 ABC transporter TM2_08110 PF00005 ABC transporter TM2_08110 PF08352 Oligopeptide/dipeptide transporter, C-terminal region TM2_08120 PF08352 Oligopeptide/dipeptide transporter, C-terminal region TM2_08120 PF00005 ABC transporter TM2_08130 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle TM2_08140 PF00528 Binding-protein-dependent transport system inner membrane component TM2_08150 PF12911 N-terminal TM domain of oligopeptide transport permease C TM2_08150 PF00528 Binding-protein-dependent transport system inner membrane component TM2_08160 PF06081 Aromatic acid exporter family member 1 TM2_08170 PF00202 Aminotransferase class-III TM2_08180 PF00578 AhpC/TSA family TM2_08190 PF01475 Ferric uptake regulator family TM2_08200 PF11023 Zinc-ribbon containing domain TM2_08210 PF14540 Nucleotidyltransferase-like TM2_08210 PF18576 Helix-turn-helix domain TM2_08310 PF00884 Sulfatase TM2_08320 PF10502 Signal peptidase, peptidase S26 TM2_08330 PF01053 Cys/Met metabolism PLP-dependent enzyme TM2_08350 PF00005 ABC transporter TM2_08360 PF09084 NMT1/THI5 like TM2_08370 PF00528 Binding-protein-dependent transport system inner membrane component TM2_08380 PF00296 Luciferase-like monooxygenase TM2_08410 PF00005 ABC transporter TM2_08470 PF08331 Domain of unknown function (DUF1730) TM2_08480 PF12671 Putative amidase domain TM2_08490 PF00588 SpoU rRNA Methylase family TM2_08500 PF06798 PrkA serine protein kinase C-terminal domain TM2_08500 PF08298 PrkA AAA domain TM2_08510 PF04285 Protein of unknown function (DUF444) TM2_08540 PF07690 Major Facilitator Superfamily TM2_08550 PF03358 NADPH-dependent FMN reductase TM2_08570 PF00313 'Cold-shock' DNA-binding domain TM2_08580 PF07694 5TMR of 5TMR-LYT TM2_08580 PF00990 Diguanylate cyclase, GGDEF domain TM2_08610 PF09580 Sporulation lipoprotein YhcN/YlaJ (Spore_YhcN_YlaJ) TM2_08630 PF07875 Coat F domain TM2_08640 PF00512 His Kinase A (phospho-acceptor) domain TM2_08640 PF00989 PAS fold TM2_08640 PF13188 PAS domain TM2_08640 PF13426 PAS domain TM2_08640 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase TM2_08650 PF00565 Staphylococcal nuclease homologue TM2_08650 PF02872 5'-nucleotidase, C-terminal domain TM2_08650 PF00746 LPXTG cell wall anchor motif TM2_08650 PF00149 Calcineurin-like phosphoesterase TM2_08660 PF04203 Sortase domain TM2_08670 PF01479 S4 domain TM2_08670 PF00849 RNA pseudouridylate synthase TM2_08690 PF13419 Haloacid dehalogenase-like hydrolase TM2_08700 PF00583 Acetyltransferase (GNAT) family TM2_08700 PF00795 Carbon-nitrogen hydrolase TM2_08740 PF05651 Putative sugar diacid recognition TM2_08740 PF17853 GGDEF-like domain TM2_08740 PF13556 PucR C-terminal helix-turn-helix domain TM2_08750 PF00202 Aminotransferase class-III TM2_08760 PF04309 Glycerol-3-phosphate responsive antiterminator TM2_08770 PF00230 Major intrinsic protein TM2_08780 PF02782 FGGY family of carbohydrate kinases, C-terminal domain TM2_08780 PF00370 FGGY family of carbohydrate kinases, N-terminal domain TM2_08790 PF01266 FAD dependent oxidoreductase TM2_08790 PF16901 C-terminal domain of alpha-glycerophosphate oxidase TM2_08800 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain TM2_08800 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I TM2_08800 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III TM2_08800 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II TM2_08810 PF13185 GAF domain TM2_08810 PF07730 Histidine kinase TM2_08820 PF00072 Response regulator receiver domain TM2_08820 PF00196 Bacterial regulatory proteins, luxR family TM2_08830 PF14148 YhdB-like protein TM2_08840 PF13028 Protein of unknown function (DUF3889) TM2_08850 PF00199 Catalase TM2_08850 PF06628 Catalase-related immune-responsive TM2_08860 PF02082 Transcriptional regulator TM2_08870 PF00042 Globin TM2_08870 PF00970 Oxidoreductase FAD-binding domain TM2_08870 PF00175 Oxidoreductase NAD-binding domain TM2_08880 PF04293 SpoVR like protein TM2_08890 PF00245 Alkaline phosphatase TM2_08900 PF01476 LysM domain TM2_08900 PF00877 NlpC/P60 family TM2_08910 PF13520 Amino acid permease TM2_08920 PF17453 Sigma-M inhibitor TM2_08930 PF13791 Sigma factor regulator C-terminal TM2_08930 PF13800 Sigma factor regulator N-terminal TM2_08940 PF04542 Sigma-70 region 2 TM2_08940 PF08281 Sigma-70, region 4 TM2_08950 PF01553 Acyltransferase TM2_08960 PF00571 CBS domain TM2_08960 PF03471 Transporter associated domain TM2_08960 PF01595 Cyclin M transmembrane N-terminal domain TM2_08970 PF13411 MerR HTH family regulatory protein TM2_08980 PF00571 CBS domain TM2_08980 PF03471 Transporter associated domain TM2_08980 PF01595 Cyclin M transmembrane N-terminal domain TM2_09000 PF02537 CrcB-like protein, Camphor Resistance (CrcB) TM2_09010 PF02537 CrcB-like protein, Camphor Resistance (CrcB) TM2_09020 PF03009 Glycerophosphoryl diester phosphodiesterase family TM2_09030 PF00924 Mechanosensitive ion channel TM2_09040 PF02146 Sir2 family TM2_09050 PF01522 Polysaccharide deacetylase TM2_09060 PF01063 Amino-transferase class IV TM2_09070 PF00582 Universal stress protein family TM2_09080 PF00664 ABC transporter transmembrane region TM2_09080 PF00005 ABC transporter TM2_09090 PF00664 ABC transporter transmembrane region TM2_09090 PF00005 ABC transporter TM2_09100 PF13460 NAD(P)H-binding TM2_09110 PF00269 Small, acid-soluble spore proteins, alpha/beta type TM2_09120 PF00005 ABC transporter TM2_09120 PF17912 MalK OB fold domain TM2_09120 PF03459 TOBE domain TM2_09130 PF13556 PucR C-terminal helix-turn-helix domain TM2_09140 PF17277 Family of unknown function (DUF5342) TM2_09150 PF14398 YheC/D like ATP-grasp TM2_09160 PF14398 YheC/D like ATP-grasp TM2_09170 PF04286 Protein of unknown function (DUF445) TM2_09180 PF06133 Control of competence regulator ComK, YlbF/YmcA TM2_09200 PF04055 Radical SAM superfamily TM2_09210 PF13434 L-lysine 6-monooxygenase (NADPH-requiring) TM2_09220 PF00999 Sodium/hydrogen exchanger family TM2_09230 PF02080 TrkA-C domain TM2_09240 PF00378 Enoyl-CoA hydratase/isomerase TM2_09250 PF14120 YhzD-like protein TM2_09260 PF00149 Calcineurin-like phosphoesterase TM2_09270 PF13514 AAA domain TM2_09280 PF01966 HD domain TM2_09290 PF14147 Sporulation protein YhaL TM2_09310 PF11667 Putative zincin peptidase TM2_09320 PF08963 Protein of unknown function (DUF1878) TM2_09330 PF01047 MarR family TM2_09340 PF12732 YtxH-like protein TM2_09360 PF17099 Tryptophan transporter TrpP TM2_09370 PF00266 Aminotransferase class-V TM2_09380 PF01230 HIT domain TM2_09390 PF00005 ABC transporter TM2_09400 PF05975 Bacterial ABC transporter protein EcsB TM2_09410 PF12787 EcsC protein family TM2_09420 PF01546 Peptidase family M20/M25/M40 TM2_09420 PF07687 Peptidase dimerisation domain TM2_09440 PF03992 Antibiotic biosynthesis monooxygenase TM2_09450 PF00905 Penicillin binding protein transpeptidase domain TM2_09450 PF00912 Transglycosylase TM2_09460 PF01208 Uroporphyrinogen decarboxylase (URO-D) TM2_09470 PF00762 Ferrochelatase TM2_09480 PF01593 Flavin containing amine oxidoreductase TM2_09490 PF17932 Tetracyclin repressor-like, C-terminal domain TM2_09490 PF00440 Bacterial regulatory proteins, tetR family TM2_09510 PF05343 M42 glutamyl aminopeptidase TM2_09520 PF00375 Sodium:dicarboxylate symporter family TM2_09530 PF14149 YhfH-like protein TM2_09540 PF12706 Beta-lactamase superfamily domain TM2_09550 PF03099 Biotin/lipoate A/B protein ligase family TM2_09550 PF10437 Bacterial lipoate protein ligase C-terminus TM2_09560 PF00501 AMP-binding enzyme TM2_09560 PF13193 AMP-binding enzyme C-terminal domain TM2_09580 PF01435 Peptidase family M48 TM2_09580 PF16491 CAAX prenyl protease N-terminal, five membrane helices TM2_09590 PF00082 Subtilase family TM2_09590 PF05922 Peptidase inhibitor I9 TM2_09600 PF00300 Histidine phosphatase superfamily (branch 1) TM2_09610 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain TM2_09620 PF00355 Rieske [2Fe-2S] domain TM2_09620 PF01266 FAD dependent oxidoreductase TM2_09640 PF08858 IDEAL domain TM2_09650 PF06338 ComK protein TM2_09660 PF01168 Alanine racemase, N-terminal domain TM2_09660 PF14031 Putative serine dehydratase domain TM2_09680 PF00155 Aminotransferase class I and II TM2_09680 PF00392 Bacterial regulatory proteins, gntR family TM2_09690 PF07690 Major Facilitator Superfamily TM2_09700 PF01337 Barstar (barnase inhibitor) TM2_09710 PF01032 FecCD transport family TM2_09720 PF01032 FecCD transport family TM2_09730 PF00005 ABC transporter TM2_09740 PF01497 Periplasmic binding protein TM2_09750 PF03816 Cell envelope-related transcriptional attenuator domain TM2_09780 PF09335 SNARE associated Golgi protein TM2_09790 PF10502 Signal peptidase, peptidase S26 TM2_09800 PF05145 Transition state regulatory protein AbrB TM2_09830 PF07681 DoxX TM2_09840 PF02915 Rubrerythrin TM2_09850 PF12705 PD-(D/E)XK nuclease superfamily TM2_09860 PF12705 PD-(D/E)XK nuclease superfamily TM2_09860 PF00580 UvrD/REP helicase N-terminal domain TM2_09860 PF13361 UvrD-like helicase C-terminal domain TM2_09870 PF00149 Calcineurin-like phosphoesterase TM2_09870 PF12320 Type 5 capsule protein repressor C-terminal domain TM2_09880 PF13476 AAA domain TM2_09900 PF10676 Spore germination protein gerPA/gerPF TM2_09910 PF10970 Spore germination protein GerPE TM2_09930 PF10737 Spore germination protein GerPC TM2_09940 PF10803 Spore germination GerPB TM2_09950 PF10676 Spore germination protein gerPA/gerPF TM2_09970 PF08757 CotH kinase protein TM2_09980 PF01557 Fumarylacetoacetate (FAA) hydrolase family TM2_09990 PF07457 Protein of unknown function (DUF1516) TM2_10000 PF10949 Protein of unknown function (DUF2777) TM2_10010 PF13537 Glutamine amidotransferase domain TM2_10010 PF00733 Asparagine synthase TM2_10020 PF01593 Flavin containing amine oxidoreductase TM2_10030 PF01593 Flavin containing amine oxidoreductase TM2_10050 PF01554 MatE TM2_10060 PF02311 AraC-like ligand binding domain TM2_10060 PF12833 Helix-turn-helix domain TM2_10100 PF00202 Aminotransferase class-III TM2_10110 PF00282 Pyridoxal-dependent decarboxylase conserved domain TM2_10120 PF04183 IucA / IucC family TM2_10120 PF06276 Ferric iron reductase FhuF-like transporter TM2_10140 PF13434 L-lysine 6-monooxygenase (NADPH-requiring) TM2_10150 PF06276 Ferric iron reductase FhuF-like transporter TM2_10150 PF04183 IucA / IucC family TM2_10180 PF02607 B12 binding domain TM2_10180 PF02965 Vitamin B12 dependent methionine synthase, activation domain TM2_10180 PF00809 Pterin binding enzyme TM2_10180 PF02574 Homocysteine S-methyltransferase TM2_10180 PF02310 B12 binding domain TM2_10190 PF02219 Methylenetetrahydrofolate reductase TM2_10190 PF02574 Homocysteine S-methyltransferase TM2_10200 PF04461 Protein of unknown function (DUF520) TM2_10210 PF13509 S1 domain TM2_10210 PF17783 CvfB-like winged helix domain TM2_10220 PF02608 ABC transporter substrate-binding protein PnrA-like TM2_10230 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain TM2_10230 PF02743 Cache domain TM2_10230 PF00672 HAMP domain TM2_10240 PF02645 Uncharacterised protein, DegV family COG1307 TM2_10250 PF10035 Uncharacterized protein conserved in bacteria (DUF2179) TM2_10250 PF02588 Uncharacterised 5xTM membrane BCR, YitT family COG1284 TM2_10260 PF12690 Intracellular proteinase inhibitor TM2_10270 PF12758 Protein of unknown function (DUF3813) TM2_10300 PF00326 Prolyl oligopeptidase family TM2_10310 PF01883 Iron-sulfur cluster assembly protein TM2_10320 PF01565 FAD binding domain TM2_10330 PF07690 Major Facilitator Superfamily TM2_10340 PF01118 Semialdehyde dehydrogenase, NAD binding domain TM2_10340 PF02774 Semialdehyde dehydrogenase, dimerisation domain TM2_10350 PF01960 ArgJ family TM2_10360 PF00696 Amino acid kinase family TM2_10370 PF00202 Aminotransferase class-III TM2_10380 PF00117 Glutamine amidotransferase class-I TM2_10380 PF00988 Carbamoyl-phosphate synthase small chain, CPSase domain TM2_10390 PF02787 Carbamoyl-phosphate synthetase large chain, oligomerisation domain TM2_10390 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain TM2_10400 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain TM2_10400 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain TM2_10410 PF14168 YjzC-like protein TM2_10430 PF07690 Major Facilitator Superfamily TM2_10440 PF11151 Protein of unknown function (DUF2929) TM2_10470 PF02608 ABC transporter substrate-binding protein PnrA-like TM2_10480 PF10815 ComZ TM2_10500 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal TM2_10500 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III TM2_10510 PF02801 Beta-ketoacyl synthase, C-terminal domain TM2_10510 PF00109 Beta-ketoacyl synthase, N-terminal domain TM2_10520 PF10026 Predicted Zn-dependent protease (DUF2268) TM2_10530 PF00005 ABC transporter TM2_10530 PF08352 Oligopeptide/dipeptide transporter, C-terminal region TM2_10540 PF08352 Oligopeptide/dipeptide transporter, C-terminal region TM2_10540 PF00005 ABC transporter TM2_10550 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle TM2_10560 PF00528 Binding-protein-dependent transport system inner membrane component TM2_10570 PF00528 Binding-protein-dependent transport system inner membrane component TM2_10570 PF12911 N-terminal TM domain of oligopeptide transport permease C TM2_10580 PF12227 Protein of unknown function (DUF3603) TM2_10590 PF00579 tRNA synthetases class I (W and Y) TM2_10600 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle TM2_10610 PF00528 Binding-protein-dependent transport system inner membrane component TM2_10620 PF12911 N-terminal TM domain of oligopeptide transport permease C TM2_10620 PF00528 Binding-protein-dependent transport system inner membrane component TM2_10630 PF00005 ABC transporter TM2_10630 PF08352 Oligopeptide/dipeptide transporter, C-terminal region TM2_10640 PF00005 ABC transporter TM2_10640 PF08352 Oligopeptide/dipeptide transporter, C-terminal region TM2_10660 PF13508 Acetyltransferase (GNAT) domain TM2_10670 PF03960 ArsC family TM2_10680 PF03741 Integral membrane protein TerC family TM2_10690 PF05389 Negative regulator of genetic competence (MecA) TM2_10700 PF13396 Phospholipase_D-nuclease N-terminal TM2_10700 PF13091 PLD-like domain TM2_10720 PF01432 Peptidase family M3 TM2_10720 PF08439 Oligopeptidase F TM2_10750 PF01152 Bacterial-like globin TM2_10760 PF01464 Transglycosylase SLT domain TM2_10770 PF01928 CYTH domain TM2_10790 PF04607 Region found in RelA / SpoT proteins TM2_10800 PF01513 ATP-NAD kinase TM2_10810 PF00849 RNA pseudouridylate synthase TM2_10820 PF00149 Calcineurin-like phosphoesterase TM2_10830 PF02254 TrkA-N domain TM2_10830 PF02080 TrkA-C domain TM2_10830 PF00999 Sodium/hydrogen exchanger family TM2_10840 PF03070 TENA/THI-4/PQQC family TM2_10850 PF02581 Thiamine monophosphate synthase TM2_10860 PF01266 FAD dependent oxidoreductase TM2_10870 PF02597 ThiS family TM2_10880 PF05690 Thiazole biosynthesis protein ThiG TM2_10890 PF00899 ThiF family TM2_10900 PF08543 Phosphomethylpyrimidine kinase TM2_10920 PF14153 Spore coat protein CotO TM2_10930 PF10612 Spore coat protein Z TM2_10940 PF10612 Spore coat protein Z TM2_10950 PF07552 Spore Coat Protein X and V domain TM2_10970 PF07552 Spore Coat Protein X and V domain TM2_10980 PF07098 Protein of unknown function (DUF1360) TM2_11010 PF14069 Stage VI sporulation protein F TM2_11020 PF13361 UvrD-like helicase C-terminal domain TM2_11020 PF00580 UvrD/REP helicase N-terminal domain TM2_11040 PF13673 Acetyltransferase (GNAT) domain TM2_11060 PF00756 Putative esterase TM2_11070 PF01053 Cys/Met metabolism PLP-dependent enzyme TM2_11080 PF01053 Cys/Met metabolism PLP-dependent enzyme TM2_11090 PF02899 Phage integrase, N-terminal SAM-like domain TM2_11090 PF00589 Phage integrase family TM2_11180 PF14163 Super-infection exclusion protein B TM2_11200 PF03255 Acetyl co-enzyme A carboxylase carboxyltransferase alpha subunit TM2_11230 PF00302 Chloramphenicol acetyltransferase TM2_11240 PF18801 response regulator aspartate phosphatase H, N terminal TM2_11240 PF13176 Tetratricopeptide repeat TM2_11310 PF01636 Phosphotransferase enzyme family TM2_11320 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family TM2_11320 PF03466 LysR substrate binding domain TM2_11330 PF01177 Asp/Glu/Hydantoin racemase TM2_11360 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family TM2_11360 PF03466 LysR substrate binding domain TM2_11370 PF07690 Major Facilitator Superfamily TM2_11380 PF07992 Pyridine nucleotide-disulphide oxidoreductase TM2_11380 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain TM2_11420 PF01168 Alanine racemase, N-terminal domain TM2_11420 PF00842 Alanine racemase, C-terminal domain TM2_11430 PF08240 Alcohol dehydrogenase GroES-like domain TM2_11430 PF00107 Zinc-binding dehydrogenase TM2_11440 PF00440 Bacterial regulatory proteins, tetR family TM2_11460 PF00669 Bacterial flagellin N-terminal helical region TM2_11460 PF00700 Bacterial flagellin C-terminal helical region TM2_11470 PF00669 Bacterial flagellin N-terminal helical region TM2_11470 PF00700 Bacterial flagellin C-terminal helical region TM2_11480 PF01494 FAD binding domain TM2_11510 PF05908 Poly-gamma-glutamate hydrolase TM2_11520 PF06114 IrrE N-terminal-like domain TM2_11530 PF01476 LysM domain TM2_11530 PF01510 N-acetylmuramoyl-L-alanine amidase TM2_11530 PF01471 Putative peptidoglycan binding domain TM2_11540 PF14185 Antitoxin SpoIISB, type II toxin-antitoxin system TM2_11550 PF14171 Toxin SpoIISA, type II toxin-antitoxin system TM2_11560 PF01384 Phosphate transporter family TM2_11570 PF01865 Protein of unknown function DUF47 TM2_11610 PF00528 Binding-protein-dependent transport system inner membrane component TM2_11620 PF00528 Binding-protein-dependent transport system inner membrane component TM2_11630 PF00005 ABC transporter TM2_11630 PF12857 TOBE-like domain TM2_11630 PF17850 CysA C-terminal regulatory domain TM2_11650 PF03611 PTS system sugar-specific permease component TM2_11680 PF00107 Zinc-binding dehydrogenase TM2_11680 PF08240 Alcohol dehydrogenase GroES-like domain TM2_11690 PF00676 Dehydrogenase E1 component TM2_11700 PF02779 Transketolase, pyrimidine binding domain TM2_11700 PF00364 Biotin-requiring enzyme TM2_11700 PF02780 Transketolase, C-terminal domain TM2_11710 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) TM2_11710 PF00364 Biotin-requiring enzyme TM2_11710 PF02817 e3 binding domain TM2_11720 PF07992 Pyridine nucleotide-disulphide oxidoreductase TM2_11720 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain TM2_11750 PF04198 Putative sugar-binding domain TM2_11770 PF13520 Amino acid permease TM2_11780 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily TM2_11790 PF13180 PDZ domain TM2_11800 PF14748 Pyrroline-5-carboxylate reductase dimerisation TM2_11800 PF03807 NADP oxidoreductase coenzyme F420-dependent TM2_11810 PF04951 D-aminopeptidase TM2_11820 PF00528 Binding-protein-dependent transport system inner membrane component TM2_11830 PF12911 N-terminal TM domain of oligopeptide transport permease C TM2_11830 PF00528 Binding-protein-dependent transport system inner membrane component TM2_11840 PF00005 ABC transporter TM2_11840 PF08352 Oligopeptide/dipeptide transporter, C-terminal region TM2_11850 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle TM2_11860 PF02016 LD-carboxypeptidase N-terminal domain TM2_11860 PF17676 LD-carboxypeptidase C-terminal domain TM2_11870 PF13378 Enolase C-terminal domain-like TM2_11870 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain TM2_11880 PF00877 NlpC/P60 family TM2_11890 PF00005 ABC transporter TM2_11890 PF08352 Oligopeptide/dipeptide transporter, C-terminal region TM2_11910 PF03061 Thioesterase superfamily TM2_11920 PF03551 Transcriptional regulator PadR-like family TM2_11950 PF13302 Acetyltransferase (GNAT) domain TM2_11960 PF02805 Metal binding domain of Ada TM2_11960 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain TM2_11960 PF12833 Helix-turn-helix domain TM2_11960 PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain TM2_11970 PF00893 Small Multidrug Resistance protein TM2_11980 PF00893 Small Multidrug Resistance protein TM2_12000 PF01842 ACT domain TM2_12000 PF00551 Formyl transferase TM2_12010 PF00696 Amino acid kinase family TM2_12010 PF01472 PUA domain TM2_12020 PF00171 Aldehyde dehydrogenase family TM2_12030 PF18801 response regulator aspartate phosphatase H, N terminal TM2_12050 PF02566 OsmC-like protein TM2_12060 PF01047 MarR family TM2_12070 PF02566 OsmC-like protein TM2_12080 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region TM2_12090 PF01717 Cobalamin-independent synthase, Catalytic domain TM2_12090 PF08267 Cobalamin-independent synthase, N-terminal domain TM2_12100 PF00082 Subtilase family TM2_12130 PF00486 Transcriptional regulatory protein, C terminal TM2_12130 PF00072 Response regulator receiver domain TM2_12140 PF00512 His Kinase A (phospho-acceptor) domain TM2_12140 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase TM2_12140 PF00672 HAMP domain TM2_12150 PF03413 Peptidase propeptide and YPEB domain TM2_12160 PF03413 Peptidase propeptide and YPEB domain TM2_12190 PF03448 MgtE intracellular N domain TM2_12190 PF01769 Divalent cation transporter TM2_12190 PF00571 CBS domain TM2_12210 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family TM2_12210 PF03466 LysR substrate binding domain TM2_12240 PF13411 MerR HTH family regulatory protein TM2_12270 PF01047 MarR family TM2_12280 PF00563 EAL domain TM2_12280 PF00990 Diguanylate cyclase, GGDEF domain TM2_12280 PF03707 Bacterial signalling protein N terminal repeat TM2_12290 PF09335 SNARE associated Golgi protein TM2_12300 PF03741 Integral membrane protein TerC family TM2_12310 PF04542 Sigma-70 region 2 TM2_12320 PF12791 Anti-sigma factor N-terminus TM2_12330 PF00269 Small, acid-soluble spore proteins, alpha/beta type TM2_12340 PF08876 Domain of unknown function (DUF1836) TM2_12350 PF01435 Peptidase family M48 TM2_12360 PF02386 Cation transport protein TM2_12370 PF04239 Protein of unknown function (DUF421) TM2_12400 PF01757 Acyltransferase family TM2_12410 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase TM2_12410 PF00512 His Kinase A (phospho-acceptor) domain TM2_12410 PF00989 PAS fold TM2_12410 PF13188 PAS domain TM2_12410 PF13426 PAS domain TM2_12420 PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain TM2_12420 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain TM2_12440 PF01008 Initiation factor 2 subunit family TM2_12450 PF01636 Phosphotransferase enzyme family TM2_12460 PF00155 Aminotransferase class I and II TM2_12470 PF02788 Ribulose bisphosphate carboxylase large chain, N-terminal domain TM2_12470 PF00016 Ribulose bisphosphate carboxylase large chain, catalytic domain TM2_12490 PF00596 Class II Aldolase and Adducin N-terminal domain TM2_12500 PF03079 ARD/ARD' family TM2_12510 PF09388 Spo0E like sporulation regulatory protein TM2_12520 PF02743 Cache domain TM2_12520 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase TM2_12520 PF00512 His Kinase A (phospho-acceptor) domain TM2_12530 PF01047 MarR family TM2_12540 PF13677 Membrane MotB of proton-channel complex MotA/MotB TM2_12540 PF00691 OmpA family TM2_12550 PF01618 MotA/TolQ/ExbB proton channel family TM2_12560 PF00004 ATPase family associated with various cellular activities (AAA) TM2_12560 PF07724 AAA domain (Cdc48 subfamily) TM2_12560 PF10431 C-terminal, D2-small domain, of ClpB protein TM2_12560 PF17871 AAA lid domain TM2_12580 PF06508 Queuosine biosynthesis protein QueC TM2_12590 PF01242 6-pyruvoyl tetrahydropterin synthase TM2_12600 PF04055 Radical SAM superfamily TM2_12610 PF14489 QueF-like protein TM2_12630 PF09953 Uncharacterized protein conserved in bacteria (DUF2187) TM2_12650 PF07486 Cell Wall Hydrolase TM2_12660 PF01943 Polysaccharide biosynthesis protein TM2_12670 PF00578 AhpC/TSA family TM2_12690 PF00557 Metallopeptidase family M24 TM2_12690 PF01321 Creatinase/Prolidase N-terminal domain TM2_12710 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family TM2_12710 PF00356 Bacterial regulatory proteins, lacI family TM2_12720 PF00874 PRD domain TM2_12720 PF03123 CAT RNA binding domain TM2_12730 PF00367 phosphotransferase system, EIIB TM2_12730 PF02378 Phosphotransferase system, EIIC TM2_12730 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 TM2_12740 PF00381 PTS HPr component phosphorylation site TM2_12750 PF05524 PEP-utilising enzyme, N-terminal TM2_12750 PF00391 PEP-utilising enzyme, mobile domain TM2_12750 PF02896 PEP-utilising enzyme, TIM barrel domain TM2_12760 PF11132 Transcriptional regulator protein (SplA) TM2_12780 PF00672 HAMP domain TM2_12780 PF02743 Cache domain TM2_12780 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain TM2_12790 PF00106 short chain dehydrogenase TM2_12800 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase TM2_12800 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase TM2_12810 PF00188 Cysteine-rich secretory protein family TM2_12820 PF03717 Penicillin-binding Protein dimerisation domain TM2_12820 PF00905 Penicillin binding protein transpeptidase domain TM2_12830 PF00512 His Kinase A (phospho-acceptor) domain TM2_12830 PF00989 PAS fold TM2_12830 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase TM2_12830 PF08447 PAS fold TM2_12840 PF00155 Aminotransferase class I and II TM2_12850 PF01545 Cation efflux family TM2_12850 PF16916 Dimerisation domain of Zinc Transporter TM2_12870 PF06271 RDD family TM2_12890 PF01584 CheW-like domain TM2_12890 PF00072 Response regulator receiver domain TM2_12900 PF14177 YkyB-like protein TM2_12910 PF02311 AraC-like ligand binding domain TM2_12910 PF12833 Helix-turn-helix domain TM2_12920 PF00892 EamA-like transporter family TM2_12950 PF07690 Major Facilitator Superfamily TM2_12960 PF03734 L,D-transpeptidase catalytic domain TM2_12960 PF01476 LysM domain TM2_12970 PF00149 Calcineurin-like phosphoesterase TM2_12970 PF10518 TAT (twin-arginine translocation) pathway signal sequence TM2_12990 PF00563 EAL domain TM2_12990 PF10388 EAL-domain associated signalling protein domain TM2_13000 PF05067 Manganese containing catalase TM2_13010 PF08796 Protein of unknown function (DUF1797) TM2_13020 PF04308 Ribonuclease H-like TM2_13030 PF14156 Antirepressor AbbA TM2_13050 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family TM2_13050 PF03466 LysR substrate binding domain TM2_13070 PF00258 Flavodoxin TM2_13090 PF00258 Flavodoxin TM2_13100 PF08503 Tetrahydrodipicolinate succinyltransferase N-terminal TM2_13100 PF00132 Bacterial transferase hexapeptide (six repeats) TM2_13100 PF14602 Hexapeptide repeat of succinyl-transferase TM2_13110 PF07687 Peptidase dimerisation domain TM2_13110 PF01546 Peptidase family M20/M25/M40 TM2_13120 PF03698 Uncharacterised protein family (UPF0180) TM2_13130 PF00924 Mechanosensitive ion channel TM2_13140 PF10417 C-terminal domain of 1-Cys peroxiredoxin TM2_13140 PF00578 AhpC/TSA family TM2_13150 PF00578 AhpC/TSA family TM2_13180 PF12804 MobA-like NTP transferase domain TM2_13190 PF00899 ThiF family TM2_13200 PF03454 MoeA C-terminal region (domain IV) TM2_13200 PF03453 MoeA N-terminal region (domain I and II) TM2_13200 PF00994 Probable molybdopterin binding domain TM2_13210 PF03205 Molybdopterin guanine dinucleotide synthesis protein B TM2_13220 PF02391 MoaE protein TM2_13230 PF02597 ThiS family TM2_13260 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion TM2_13270 PF00005 ABC transporter TM2_13280 PF02687 FtsX-like permease family TM2_13280 PF12704 MacB-like periplasmic core domain TM2_13290 PF00455 DeoR C terminal sensor domain TM2_13290 PF08220 DeoR-like helix-turn-helix domain TM2_13300 PF00294 pfkB family carbohydrate kinase TM2_13310 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit TM2_13310 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 TM2_13320 PF10502 Signal peptidase, peptidase S26 TM2_13340 PF00005 ABC transporter TM2_13340 PF12848 ABC transporter TM2_13350 PF02073 Thermophilic metalloprotease (M29) TM2_13360 PF17447 Uncharacterized YkpC-like TM2_13380 PF18277 AbrB C-terminal domain TM2_13380 PF04014 Antidote-toxin recognition MazE, bacterial antitoxin TM2_13390 PF00989 PAS fold TM2_13390 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase TM2_13390 PF00512 His Kinase A (phospho-acceptor) domain TM2_13400 PF06094 Gamma-glutamyl cyclotransferase, AIG2-like TM2_13410 PF02080 TrkA-C domain TM2_13410 PF02254 TrkA-N domain TM2_13420 PF13382 Adenine deaminase C-terminal domain TM2_13420 PF01979 Amidohydrolase family TM2_13430 PF00753 Metallo-beta-lactamase superfamily TM2_13430 PF07521 Zn-dependent metallo-hydrolase RNA specificity domain TM2_13430 PF17770 Ribonuclease J C-terminal domain TM2_13440 PF07288 Protein of unknown function (DUF1447) TM2_13460 PF01327 Polypeptide deformylase TM2_13490 PF00676 Dehydrogenase E1 component TM2_13500 PF02779 Transketolase, pyrimidine binding domain TM2_13500 PF02780 Transketolase, C-terminal domain TM2_13510 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) TM2_13510 PF00364 Biotin-requiring enzyme TM2_13510 PF02817 e3 binding domain TM2_13520 PF07992 Pyridine nucleotide-disulphide oxidoreductase TM2_13520 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain TM2_13540 PF13790 SR1 protein TM2_13550 PF01276 Orn/Lys/Arg decarboxylase, major domain TM2_13550 PF03711 Orn/Lys/Arg decarboxylase, C-terminal domain TM2_13560 PF05256 Uncharacterised protein family (UPF0223) TM2_13570 PF06335 Protein of unknown function (DUF1054) TM2_13590 PF00459 Inositol monophosphatase family TM2_13620 PF04542 Sigma-70 region 2 TM2_13620 PF08281 Sigma-70, region 4 TM2_13630 PF13490 Putative zinc-finger TM2_13660 PF00679 Elongation factor G C-terminus TM2_13660 PF14492 Elongation Factor G, domain II TM2_13660 PF00009 Elongation factor Tu GTP binding domain TM2_13660 PF03144 Elongation factor Tu domain 2 TM2_13670 PF14036 YlaH-like protein TM2_13680 PF09963 Uncharacterized protein conserved in bacteria (DUF2197) TM2_13690 PF09580 Sporulation lipoprotein YhcN/YlaJ (Spore_YhcN_YlaJ) TM2_13700 PF02562 PhoH-like protein TM2_13700 PF13638 PIN domain TM2_13720 PF04960 Glutaminase TM2_13730 PF07408 Protein of unknown function (DUF1507) TM2_13740 PF01098 Cell cycle protein TM2_13750 PF02785 Biotin carboxylase C-terminal domain TM2_13750 PF00289 Biotin carboxylase, N-terminal domain TM2_13750 PF00364 Biotin-requiring enzyme TM2_13750 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain TM2_13750 PF00682 HMGL-like TM2_13750 PF02436 Conserved carboxylase domain TM2_13760 PF00875 DNA photolyase TM2_13760 PF03441 FAD binding domain of DNA photolyase TM2_13770 PF02628 Cytochrome oxidase assembly protein TM2_13780 PF01040 UbiA prenyltransferase family TM2_13790 PF00034 Cytochrome c TM2_13790 PF00116 Cytochrome C oxidase subunit II, periplasmic domain TM2_13790 PF02790 Cytochrome C oxidase subunit II, transmembrane domain TM2_13800 PF00115 Cytochrome C and Quinol oxidase polypeptide I TM2_13810 PF00510 Cytochrome c oxidase subunit III TM2_13820 PF03626 Prokaryotic Cytochrome C oxidase subunit IV TM2_13830 PF09678 Cytochrome c oxidase caa3 assembly factor (Caa3_CtaG) TM2_13840 PF08868 YugN-like family TM2_13850 PF00571 CBS domain TM2_13860 PF00188 Cysteine-rich secretory protein family TM2_13860 PF14504 CAP-associated N-terminal TM2_13870 PF14071 Putative coat protein TM2_13880 PF14003 YlbE-like protein TM2_13900 PF06133 Control of competence regulator ComK, YlbF/YmcA TM2_13910 PF09902 Uncharacterized protein conserved in bacteria (DUF2129) TM2_13930 PF01467 Cytidylyltransferase-like TM2_13940 PF07670 Nucleoside recognition TM2_13950 PF01734 Patatin-like phospholipase TM2_13960 PF05362 Lon protease (S16) C-terminal proteolytic domain TM2_13960 PF13180 PDZ domain TM2_13970 PF05636 HIGH Nucleotidyl Transferase TM2_13990 PF02620 Large ribosomal RNA subunit accumulation protein YceD TM2_14000 PF01783 Ribosomal L32p protein family TM2_14020 PF00583 Acetyltransferase (GNAT) family TM2_14030 PF02558 Ketopantoate reductase PanE/ApbA TM2_14030 PF08546 Ketopantoate reductase PanE/ApbA C terminal TM2_14040 PF10079 Bacillithiol biosynthesis BshC TM2_14050 PF02381 MraZ protein, putative antitoxin-like TM2_14060 PF01795 MraW methylase family TM2_14080 PF03793 PASTA domain TM2_14080 PF03717 Penicillin-binding Protein dimerisation domain TM2_14080 PF00905 Penicillin binding protein transpeptidase domain TM2_14090 PF03793 PASTA domain TM2_14090 PF03717 Penicillin-binding Protein dimerisation domain TM2_14090 PF00905 Penicillin binding protein transpeptidase domain TM2_14100 PF01225 Mur ligase family, catalytic domain TM2_14100 PF02875 Mur ligase family, glutamate ligase domain TM2_14100 PF08245 Mur ligase middle domain TM2_14110 PF10555 Phospho-N-acetylmuramoyl-pentapeptide-transferase signature 1 TM2_14110 PF00953 Glycosyl transferase family 4 TM2_14120 PF02875 Mur ligase family, glutamate ligase domain TM2_14120 PF08245 Mur ligase middle domain TM2_14130 PF01098 Cell cycle protein TM2_14140 PF04101 Glycosyltransferase family 28 C-terminal domain TM2_14140 PF03033 Glycosyltransferase family 28 N-terminal domain TM2_14150 PF01565 FAD binding domain TM2_14150 PF02873 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain TM2_14160 PF08478 POTRA domain, FtsQ-type TM2_14170 PF05949 Bacterial protein of unknown function (DUF881) TM2_14180 PF05949 Bacterial protein of unknown function (DUF881) TM2_14190 PF06947 Protein of unknown function (DUF1290) TM2_14200 PF02491 SHS2 domain inserted in FTSA TM2_14210 PF00091 Tubulin/FtsZ family, GTPase domain TM2_14210 PF12327 FtsZ family, C-terminal domain TM2_14220 PF05922 Peptidase inhibitor I9 TM2_14220 PF00082 Subtilase family TM2_14230 PF03419 Sporulation factor SpoIIGA TM2_14240 PF04542 Sigma-70 region 2 TM2_14240 PF04545 Sigma-70, region 4 TM2_14250 PF04542 Sigma-70 region 2 TM2_14250 PF04539 Sigma-70 region 3 TM2_14250 PF04545 Sigma-70, region 4 TM2_14260 PF04198 Putative sugar-binding domain TM2_14290 PF03608 PTS system enzyme II sorbitol-specific factor TM2_14300 PF03612 Sorbitol phosphotransferase enzyme II N-terminus TM2_14300 PF07663 Sorbitol phosphotransferase enzyme II C-terminus TM2_14310 PF03829 PTS system glucitol/sorbitol-specific IIA component TM2_14330 PF00005 ABC transporter TM2_14340 PF05239 PRC-barrel domain TM2_14350 PF02578 Multi-copper polyphenol oxidoreductase laccase TM2_14360 PF01168 Alanine racemase, N-terminal domain TM2_14370 PF04472 Cell division protein SepF TM2_14380 PF02325 YGGT family TM2_14390 PF01479 S4 domain TM2_14390 PF17774 Putative RNA-binding domain in YlmH TM2_14400 PF05103 DivIVA protein TM2_14410 PF08264 Anticodon-binding domain of tRNA TM2_14410 PF00133 tRNA synthetases class I (I, L, M and V) TM2_14420 PF01258 Prokaryotic dksA/traR C4-type zinc finger TM2_14430 PF01252 Signal peptidase (SPase) II TM2_14440 PF00849 RNA pseudouridylate synthase TM2_14440 PF01479 S4 domain TM2_14450 PF00156 Phosphoribosyl transferase domain TM2_14460 PF00860 Permease family TM2_14470 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain TM2_14470 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain TM2_14480 PF01979 Amidohydrolase family TM2_14490 PF00988 Carbamoyl-phosphate synthase small chain, CPSase domain TM2_14490 PF00117 Glutamine amidotransferase class-I TM2_14500 PF02142 MGS-like domain TM2_14500 PF02787 Carbamoyl-phosphate synthetase large chain, oligomerisation domain TM2_14500 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain TM2_14510 PF10418 Iron-sulfur cluster binding domain of dihydroorotate dehydrogenase B TM2_14520 PF01180 Dihydroorotate dehydrogenase TM2_14530 PF00215 Orotidine 5'-phosphate decarboxylase / HUMPS family TM2_14540 PF00156 Phosphoribosyl transferase domain TM2_14560 PF01507 Phosphoadenosine phosphosulfate reductase family TM2_14570 PF01384 Phosphate transporter family TM2_14580 PF14306 PUA-like domain TM2_14580 PF01747 ATP-sulfurylase TM2_14600 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases TM2_14610 PF01903 CbiX TM2_14630 PF05670 NFACT protein RNA binding domain TM2_14640 PF00689 Cation transporting ATPase, C-terminus TM2_14640 PF00690 Cation transporter/ATPase, N-terminus TM2_14650 PF08340 Domain of unknown function (DUF1732) TM2_14650 PF03755 YicC-like family, N-terminal region TM2_14660 PF04025 Domain of unknown function (DUF370) TM2_14670 PF00625 Guanylate kinase TM2_14680 PF01192 RNA polymerase Rpb6 TM2_14690 PF04127 DNA / pantothenate metabolism flavoprotein TM2_14690 PF02441 Flavoprotein TM2_14700 PF00271 Helicase conserved C-terminal domain TM2_14700 PF17764 3′ DNA-binding domain (3′BD) TM2_14700 PF18074 Primosomal protein N C-terminal domain TM2_14700 PF18319 PriA DNA helicase Cys-rich region (CRR) domain TM2_14700 PF04851 Type III restriction enzyme, res subunit TM2_14710 PF01327 Polypeptide deformylase TM2_14720 PF02911 Formyl transferase, C-terminal domain TM2_14720 PF00551 Formyl transferase TM2_14730 PF01029 NusB family TM2_14730 PF01189 16S rRNA methyltransferase RsmB/F TM2_14740 PF04055 Radical SAM superfamily TM2_14760 PF00069 Protein kinase domain TM2_14760 PF03793 PASTA domain TM2_14770 PF03193 RsgA GTPase TM2_14770 PF16745 RsgA N-terminal domain TM2_14780 PF00834 Ribulose-phosphate 3 epimerase family TM2_14790 PF04265 Thiamin pyrophosphokinase, vitamin B1 binding domain TM2_14790 PF04263 Thiamin pyrophosphokinase, catalytic domain TM2_14800 PF00830 Ribosomal L28 family TM2_14810 PF03780 Asp23 family, cell envelope-related function TM2_14820 PF13684 Dihydroxyacetone kinase family TM2_14820 PF02734 DAK2 domain TM2_14830 PF03315 Serine dehydratase beta chain TM2_14830 PF01842 ACT domain TM2_14840 PF03313 Serine dehydratase alpha chain TM2_14850 PF00270 DEAD/DEAH box helicase TM2_14850 PF00271 Helicase conserved C-terminal domain TM2_14850 PF17191 RecG wedge domain TM2_14870 PF02504 Fatty acid synthesis protein TM2_14880 PF00698 Acyl transferase domain TM2_14900 PF00550 Phosphopantetheine attachment site TM2_14910 PF14622 Ribonuclease-III-like TM2_14910 PF00035 Double-stranded RNA binding motif TM2_14920 PF02463 RecF/RecN/SMC N terminal domain TM2_14920 PF06470 SMC proteins Flexible Hinge Domain TM2_14930 PF00448 SRP54-type protein, GTPase domain TM2_14930 PF02881 SRP54-type protein, helical bundle domain TM2_14940 PF04297 Putative helix-turn-helix protein, YlxM / p13 like TM2_14950 PF02978 Signal peptide binding domain TM2_14950 PF02881 SRP54-type protein, helical bundle domain TM2_14950 PF00448 SRP54-type protein, GTPase domain TM2_14960 PF00886 Ribosomal protein S16 TM2_14980 PF11068 YlqD protein TM2_14990 PF01782 RimM N-terminal domain TM2_14990 PF05239 PRC-barrel domain TM2_15000 PF01746 tRNA (Guanine-1)-methyltransferase TM2_15010 PF01245 Ribosomal protein L19 TM2_15020 PF01926 50S ribosome-binding GTPase TM2_15030 PF01351 Ribonuclease HII TM2_15050 PF01312 FlhB HrpN YscU SpaS Family TM2_15060 PF08442 ATP-grasp domain TM2_15060 PF00549 CoA-ligase TM2_15070 PF02629 CoA binding domain TM2_15070 PF00549 CoA-ligase TM2_15080 PF02481 DNA recombination-mediator protein A TM2_15090 PF01131 DNA topoisomerase TM2_15090 PF01751 Toprim domain TM2_15090 PF01396 Topoisomerase DNA binding C4 zinc finger TM2_15100 PF01134 Glucose inhibited division protein A TM2_15110 PF02899 Phage integrase, N-terminal SAM-like domain TM2_15110 PF00589 Phage integrase family TM2_15120 PF00227 Proteasome subunit TM2_15130 PF07724 AAA domain (Cdc48 subfamily) TM2_15130 PF10431 C-terminal, D2-small domain, of ClpB protein TM2_15130 PF00004 ATPase family associated with various cellular activities (AAA) TM2_15140 PF08222 CodY helix-turn-helix domain TM2_15140 PF06018 CodY GAF-like domain TM2_15150 PF00460 Flagella basal body rod protein TM2_15160 PF00460 Flagella basal body rod protein TM2_15160 PF06429 Flagellar basal body rod FlgEFG protein C-terminal TM2_15170 PF02049 Flagellar hook-basal body complex protein FliE TM2_15180 PF01514 Secretory protein of YscJ/FliF family TM2_15180 PF08345 Flagellar M-ring protein C-terminal TM2_15190 PF01706 FliG C-terminal domain TM2_15190 PF14841 FliG middle domain TM2_15190 PF14842 FliG N-terminal domain TM2_15200 PF02108 Flagellar assembly protein FliH TM2_15210 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain TM2_15210 PF02874 ATP synthase alpha/beta family, beta-barrel domain TM2_15210 PF18269 T3SS EscN ATPase C-terminal domain TM2_15220 PF02050 Flagellar FliJ protein TM2_15230 PF03448 MgtE intracellular N domain TM2_15240 PF02120 Flagellar hook-length control protein FliK TM2_15250 PF03963 Flagellar hook capping protein - N-terminal region TM2_15260 PF06429 Flagellar basal body rod FlgEFG protein C-terminal TM2_15260 PF00460 Flagella basal body rod protein TM2_15270 PF06289 Flagellar and Swarming motility proteins TM2_15280 PF03748 Flagellar basal body-associated protein FliL TM2_15290 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term TM2_15290 PF02154 Flagellar motor switch protein FliM TM2_15300 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term TM2_15300 PF04509 CheC-like family TM2_15310 PF00072 Response regulator receiver domain TM2_15320 PF04347 Flagellar biosynthesis protein, FliO TM2_15330 PF00813 FliP family TM2_15340 PF01313 Bacterial export proteins, family 3 TM2_15350 PF01311 Bacterial export proteins, family 1 TM2_15360 PF01312 FlhB HrpN YscU SpaS Family TM2_15370 PF00771 FHIPEP family TM2_15380 PF00448 SRP54-type protein, GTPase domain TM2_15390 PF10609 NUBPL iron-transfer P-loop NTPase TM2_15400 PF01339 CheB methylesterase TM2_15400 PF00072 Response regulator receiver domain TM2_15410 PF01627 Hpt domain TM2_15410 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase TM2_15410 PF02895 Signal transducing histidine kinase, homodimeric domain TM2_15410 PF01584 CheW-like domain TM2_15410 PF07194 P2 response regulator binding domain TM2_15420 PF01584 CheW-like domain TM2_15430 PF04509 CheC-like family TM2_15440 PF03975 CheD chemotactic sensory transduction TM2_15450 PF04545 Sigma-70, region 4 TM2_15450 PF04539 Sigma-70 region 3 TM2_15450 PF04542 Sigma-70 region 2 TM2_15470 PF00318 Ribosomal protein S2 TM2_15480 PF00889 Elongation factor TS TM2_15490 PF00696 Amino acid kinase family TM2_15500 PF01765 Ribosome recycling factor TM2_15510 PF01255 Putative undecaprenyl diphosphate synthase TM2_15530 PF08436 1-deoxy-D-xylulose 5-phosphate reductoisomerase C-terminal domain TM2_15530 PF02670 1-deoxy-D-xylulose 5-phosphate reductoisomerase TM2_15530 PF13288 DXP reductoisomerase C-terminal domain TM2_15540 PF02163 Peptidase family M50 TM2_15540 PF17820 PDZ domain TM2_15550 PF04073 Aminoacyl-tRNA editing domain TM2_15550 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) TM2_15550 PF03129 Anticodon binding domain TM2_15560 PF14480 DNA polymerase III polC-type N-terminus I TM2_15560 PF11490 DNA polymerase III polC-type N-terminus II TM2_15560 PF07733 Bacterial DNA polymerase III alpha NTPase domain TM2_15560 PF17657 Bacterial DNA polymerase III alpha subunit finger domain TM2_15560 PF14579 Helix-hairpin-helix motif TM2_15560 PF02811 PHP domain TM2_15560 PF00929 Exonuclease TM2_15570 PF00942 Cellulose binding domain TM2_15570 PF00759 Glycosyl hydrolase family 9 TM2_15580 PF00759 Glycosyl hydrolase family 9 TM2_15580 PF02011 Glycosyl hydrolase family 48 TM2_15580 PF00942 Cellulose binding domain TM2_15590 PF00331 Glycosyl hydrolase family 10 TM2_15590 PF12791 Anti-sigma factor N-terminus TM2_15610 PF02576 RimP N-terminal domain TM2_15610 PF17384 RimP C-terminal SH3 domain TM2_15620 PF13184 NusA-like KH domain TM2_15620 PF08529 NusA N-terminal domain TM2_15620 PF00575 S1 RNA binding domain TM2_15630 PF04296 Protein of unknown function (DUF448) TM2_15640 PF01248 Ribosomal protein L7Ae/L30e/S12e/Gadd45 family TM2_15650 PF04760 Translation initiation factor IF-2, N-terminal region TM2_15650 PF11987 Translation-initiation factor 2 TM2_15650 PF00009 Elongation factor Tu GTP binding domain TM2_15660 PF04456 Protein of unknown function (DUF503) TM2_15670 PF02033 Ribosome-binding factor A TM2_15680 PF01509 TruB family pseudouridylate synthase (N terminal domain) TM2_15680 PF16198 tRNA pseudouridylate synthase B C-terminal domain TM2_15690 PF01687 Riboflavin kinase TM2_15690 PF06574 FAD synthetase TM2_15700 PF00312 Ribosomal protein S15 TM2_15710 PF01138 3' exoribonuclease family, domain 1 TM2_15710 PF03725 3' exoribonuclease family, domain 2 TM2_15710 PF00575 S1 RNA binding domain TM2_15710 PF03726 Polyribonucleotide nucleotidyltransferase, RNA binding domain TM2_15710 PF00013 KH domain TM2_15720 PF01522 Polysaccharide deacetylase TM2_15730 PF00675 Insulinase (Peptidase family M16) TM2_15730 PF05193 Peptidase M16 inactive domain TM2_15750 PF05239 PRC-barrel domain TM2_15760 PF01262 Alanine dehydrogenase/PNT, C-terminal domain TM2_15760 PF16924 Dipicolinate synthase subunit A N-terminal domain TM2_15770 PF02441 Flavoprotein TM2_15780 PF01118 Semialdehyde dehydrogenase, NAD binding domain TM2_15780 PF02774 Semialdehyde dehydrogenase, dimerisation domain TM2_15790 PF00696 Amino acid kinase family TM2_15790 PF13840 ACT domain TM2_15800 PF00701 Dihydrodipicolinate synthetase family TM2_15810 PF17770 Ribonuclease J C-terminal domain TM2_15810 PF07521 Zn-dependent metallo-hydrolase RNA specificity domain TM2_15810 PF00753 Metallo-beta-lactamase superfamily TM2_15820 PF00574 Clp protease TM2_15830 PF14035 YlzJ-like protein TM2_15840 PF01580 FtsK/SpoIIIE family TM2_15840 PF09397 Ftsk gamma domain TM2_15840 PF17854 FtsK alpha domain TM2_15850 PF00392 Bacterial regulatory proteins, gntR family TM2_15850 PF07702 UTRA domain TM2_15860 PF07690 Major Facilitator Superfamily TM2_15870 PF03176 MMPL family TM2_15880 PF05193 Peptidase M16 inactive domain TM2_15890 PF05193 Peptidase M16 inactive domain TM2_15890 PF00675 Insulinase (Peptidase family M16) TM2_15910 PF03176 MMPL family TM2_15930 PF11588 Protein of unknown function (DUF3243) TM2_15940 PF11868 Protein of unknown function (DUF3388) TM2_15950 PF13464 Domain of unknown function (DUF4115) TM2_15960 PF01066 CDP-alcohol phosphatidyltransferase TM2_15970 PF00994 Probable molybdopterin binding domain TM2_15970 PF18146 Damage-inducible protein CinA KH domain TM2_15970 PF02464 Competence-damaged protein TM2_15980 PF00154 recA bacterial DNA recombination protein TM2_15990 PF00013 KH domain TM2_15990 PF01966 HD domain TM2_15990 PF12072 Domain of unknown function (DUF3552) TM2_16000 PF13277 YmdB-like protein TM2_16010 PF04232 Stage V sporulation protein S (SpoVS) TM2_16020 PF00873 AcrB/AcrD/AcrF family TM2_16030 PF08240 Alcohol dehydrogenase GroES-like domain TM2_16030 PF00107 Zinc-binding dehydrogenase TM2_16040 PF00155 Aminotransferase class I and II TM2_16050 PF00919 Uncharacterized protein family UPF0004 TM2_16050 PF04055 Radical SAM superfamily TM2_16050 PF01938 TRAM domain TM2_16060 PF06133 Control of competence regulator ComK, YlbF/YmcA TM2_16080 PF10628 Outer spore coat protein E (CotE) TM2_16090 PF00488 MutS domain V TM2_16090 PF01624 MutS domain I TM2_16090 PF05188 MutS domain II TM2_16090 PF05192 MutS domain III TM2_16090 PF05190 MutS family domain IV TM2_16100 PF08676 MutL C terminal dimerisation domain TM2_16100 PF01119 DNA mismatch repair protein, C-terminal domain TM2_16120 PF17735 Biofilm surface layer A TM2_16140 PF02559 CarD-like/TRCF domain TM2_16150 PF05908 Poly-gamma-glutamate hydrolase TM2_16160 PF17874 MalT-like TPR region TM2_16160 PF18801 response regulator aspartate phosphatase H, N terminal TM2_16170 PF00082 Subtilase family TM2_16180 PF05908 Poly-gamma-glutamate hydrolase TM2_16190 PF02566 OsmC-like protein TM2_16200 PF00893 Small Multidrug Resistance protein TM2_16210 PF00893 Small Multidrug Resistance protein TM2_16240 PF12788 YmaF family TM2_16260 PF17209 Hfq protein TM2_16290 PF07972 NrdI Flavodoxin like TM2_16300 PF02867 Ribonucleotide reductase, barrel domain TM2_16300 PF00317 Ribonucleotide reductase, all-alpha domain TM2_16300 PF08343 Ribonucleotide reductase N-terminal TM2_16310 PF00268 Ribonucleotide reductase, small chain TM2_16330 PF05036 Sporulation related domain TM2_16330 PF01520 N-acetylmuramoyl-L-alanine amidase TM2_16340 PF17866 AAA lid domain TM2_16340 PF00004 ATPase family associated with various cellular activities (AAA) TM2_16350 PF13167 GTP-binding GTPase N-terminal TM2_16350 PF16360 GTP-binding GTPase Middle Region TM2_16350 PF01926 50S ribosome-binding GTPase TM2_16360 PF06838 Methionine gamma-lyase TM2_16370 PF13411 MerR HTH family regulatory protein TM2_16380 PF00120 Glutamine synthetase, catalytic domain TM2_16380 PF03951 Glutamine synthetase, beta-Grasp domain TM2_16420 PF18801 response regulator aspartate phosphatase H, N terminal TM2_16460 PF08240 Alcohol dehydrogenase GroES-like domain TM2_16460 PF00107 Zinc-binding dehydrogenase TM2_16480 PF04740 LXG domain of WXG superfamily TM2_16490 PF04634 Protein of unknown function, DUF600 TM2_16520 PF08818 Domain of unknown function (DU1801) TM2_16570 PF18801 response regulator aspartate phosphatase H, N terminal TM2_16590 PF06912 Protein of unknown function (DUF1275) TM2_16600 PF01068 ATP dependent DNA ligase domain TM2_16610 PF02735 Ku70/Ku80 beta-barrel domain TM2_16620 PF09954 Uncharacterized protein conserved in bacteria (DUF2188) TM2_16640 PF02082 Transcriptional regulator TM2_16650 PF05368 NmrA-like family TM2_16660 PF02754 Cysteine-rich domain TM2_16670 PF11870 Domain of unknown function (DUF3390) TM2_16670 PF13183 4Fe-4S dicluster domain TM2_16670 PF02589 LUD domain TM2_16680 PF02589 LUD domain TM2_16720 PF04239 Protein of unknown function (DUF421) TM2_16730 PF16295 Tetracyclin repressor-like, C-terminal domain TM2_16730 PF00440 Bacterial regulatory proteins, tetR family TM2_16740 PF00667 FAD binding domain TM2_16740 PF00258 Flavodoxin TM2_16740 PF00175 Oxidoreductase NAD-binding domain TM2_16740 PF00067 Cytochrome P450 TM2_16750 PF00089 Trypsin TM2_16760 PF13231 Dolichyl-phosphate-mannose-protein mannosyltransferase TM2_16770 PF14040 Deoxyribonuclease NucA/NucB TM2_16780 PF01740 STAS domain TM2_16790 PF16800 IseA DL-endopeptidase inhibitor TM2_16810 PF00717 Peptidase S24-like TM2_16810 PF01726 LexA DNA binding domain TM2_16820 PF01476 LysM domain TM2_16830 PF00239 Resolvase, N terminal domain TM2_16840 PF05979 Bacterial protein of unknown function (DUF896) TM2_16850 PF02779 Transketolase, pyrimidine binding domain TM2_16850 PF02780 Transketolase, C-terminal domain TM2_16850 PF00456 Transketolase, thiamine diphosphate binding domain TM2_16860 PF10747 Sporulation inhibitor of replication protein SirA TM2_16870 PF03672 Uncharacterised protein family (UPF0154) TM2_16880 PF02683 Cytochrome C biogenesis protein transmembrane region TM2_16890 PF07301 Protein of unknown function (DUF1453) TM2_16900 PF11084 Protein of unknown function (DUF2621) TM2_16920 PF08179 Small acid-soluble spore protein P family TM2_16940 PF00694 Aconitase C-terminal domain TM2_16940 PF00330 Aconitase family (aconitate hydratase) TM2_16950 PF00578 AhpC/TSA family TM2_16960 PF13040 Fur-regulated basic protein B TM2_16970 PF08177 Small acid-soluble spore protein N family TM2_16990 PF03061 Thioesterase superfamily TM2_17010 PF01521 Iron-sulphur cluster biosynthesis TM2_17020 PF02660 Glycerol-3-phosphate acyltransferase TM2_17030 PF13380 CoA binding domain TM2_17040 PF00204 DNA gyrase B TM2_17040 PF00986 DNA gyrase B subunit, carboxyl terminus TM2_17040 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase TM2_17040 PF01751 Toprim domain TM2_17050 PF03989 DNA gyrase C-terminal domain, beta-propeller TM2_17050 PF00521 DNA gyrase/topoisomerase IV, subunit A TM2_17080 PF07690 Major Facilitator Superfamily TM2_17090 PF00180 Isocitrate/isopropylmalate dehydrogenase TM2_17100 PF14602 Hexapeptide repeat of succinyl-transferase TM2_17100 PF12464 Maltose acetyltransferase TM2_17110 PF01451 Low molecular weight phosphotyrosine protein phosphatase TM2_17120 PF02040 Arsenical pump membrane protein TM2_17130 PF01022 Bacterial regulatory protein, arsR family TM2_17160 PF01323 DSBA-like thioredoxin domain TM2_17170 PF02525 Flavodoxin-like fold TM2_17190 PF00440 Bacterial regulatory proteins, tetR family TM2_17200 PF02525 Flavodoxin-like fold TM2_17210 PF01638 HxlR-like helix-turn-helix TM2_17230 PF00291 Pyridoxal-phosphate dependent enzyme TM2_17240 PF01042 Endoribonuclease L-PSP TM2_17270 PF01494 FAD binding domain TM2_17300 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region TM2_17310 PF07859 alpha/beta hydrolase fold TM2_17310 PF00934 PE family TM2_17320 PF13411 MerR HTH family regulatory protein TM2_17340 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase TM2_17340 PF00512 His Kinase A (phospho-acceptor) domain TM2_17350 PF00072 Response regulator receiver domain TM2_17350 PF00486 Transcriptional regulatory protein, C terminal TM2_17360 PF02055 Glycosyl hydrolase family 30 TIM-barrel domain TM2_17360 PF17189 Glycosyl hydrolase family 30 beta sandwich domain TM2_17370 PF03422 Carbohydrate binding module (family 6) TM2_17370 PF04616 Glycosyl hydrolases family 43 TM2_17380 PF00171 Aldehyde dehydrogenase family TM2_17390 PF02056 Family 4 glycosyl hydrolase TM2_17390 PF11975 Family 4 glycosyl hydrolase C-terminal domain TM2_17400 PF00528 Binding-protein-dependent transport system inner membrane component TM2_17410 PF00528 Binding-protein-dependent transport system inner membrane component TM2_17420 PF01547 Bacterial extracellular solute-binding protein TM2_17430 PF00356 Bacterial regulatory proteins, lacI family TM2_17440 PF00834 Ribulose-phosphate 3 epimerase family TM2_17470 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 TM2_17490 PF00583 Acetyltransferase (GNAT) family TM2_17500 PF00155 Aminotransferase class I and II TM2_17500 PF00392 Bacterial regulatory proteins, gntR family TM2_17520 PF01047 MarR family TM2_17530 PF07690 Major Facilitator Superfamily TM2_17540 PF01116 Fructose-bisphosphate aldolase class-II TM2_17550 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 TM2_17550 PF02378 Phosphotransferase system, EIIC TM2_17550 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit TM2_17560 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 TM2_17560 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit TM2_17570 PF00294 pfkB family carbohydrate kinase TM2_17580 PF01380 SIS domain TM2_17580 PF01418 Helix-turn-helix domain, rpiR family TM2_17590 PF13091 PLD-like domain TM2_17630 PF00171 Aldehyde dehydrogenase family TM2_17640 PF00667 FAD binding domain TM2_17640 PF00258 Flavodoxin TM2_17640 PF00175 Oxidoreductase NAD-binding domain TM2_17650 PF01077 Nitrite and sulphite reductase 4Fe-4S domain TM2_17650 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain TM2_17660 PF16177 Acetyl-coenzyme A synthetase N-terminus TM2_17660 PF00501 AMP-binding enzyme TM2_17660 PF13193 AMP-binding enzyme C-terminal domain TM2_17670 PF01039 Carboxyl transferase domain TM2_17680 PF00378 Enoyl-CoA hydratase/isomerase TM2_17690 PF00682 HMGL-like TM2_17700 PF00364 Biotin-requiring enzyme TM2_17710 PF02785 Biotin carboxylase C-terminal domain TM2_17710 PF00289 Biotin carboxylase, N-terminal domain TM2_17710 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain TM2_17720 PF00501 AMP-binding enzyme TM2_17720 PF13193 AMP-binding enzyme C-terminal domain TM2_17730 PF00441 Acyl-CoA dehydrogenase, C-terminal domain TM2_17730 PF02770 Acyl-CoA dehydrogenase, middle domain TM2_17730 PF02771 Acyl-CoA dehydrogenase, N-terminal domain TM2_17740 PF02638 Glycosyl hydrolase-like 10 TM2_17750 PF13350 Tyrosine phosphatase family TM2_17760 PF00455 DeoR C terminal sensor domain TM2_17760 PF08220 DeoR-like helix-turn-helix domain TM2_17770 PF14552 Tautomerase enzyme TM2_17790 PF05651 Putative sugar diacid recognition TM2_17790 PF17853 GGDEF-like domain TM2_17790 PF13556 PucR C-terminal helix-turn-helix domain TM2_17800 PF01565 FAD binding domain TM2_17800 PF02913 FAD linked oxidases, C-terminal domain TM2_17810 PF02754 Cysteine-rich domain TM2_17810 PF13183 4Fe-4S dicluster domain TM2_17820 PF03323 Bacillus/Clostridium GerA spore germination protein TM2_17830 PF03845 Spore germination protein TM2_17850 PF12728 Helix-turn-helix domain TM2_17860 PF04138 GtrA-like protein TM2_17870 PF00483 Nucleotidyl transferase TM2_17880 PF09335 SNARE associated Golgi protein TM2_17890 PF02602 Uroporphyrinogen-III synthase HemD TM2_17910 PF00296 Luciferase-like monooxygenase TM2_17950 PF01554 MatE TM2_17960 PF02113 D-Ala-D-Ala carboxypeptidase 3 (S13) family TM2_17970 PF01095 Pectinesterase TM2_17980 PF04239 Protein of unknown function (DUF421) TM2_17990 PF00355 Rieske [2Fe-2S] domain TM2_18000 PF04324 BFD-like [2Fe-2S] binding domain TM2_18000 PF01077 Nitrite and sulphite reductase 4Fe-4S domain TM2_18000 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain TM2_18000 PF07992 Pyridine nucleotide-disulphide oxidoreductase TM2_18000 PF18267 Rubredoxin NAD+ reductase C-terminal domain TM2_18010 PF04879 Molybdopterin oxidoreductase Fe4S4 domain TM2_18010 PF00384 Molybdopterin oxidoreductase TM2_18010 PF01568 Molydopterin dinucleotide binding domain TM2_18020 PF04324 BFD-like [2Fe-2S] binding domain TM2_18020 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain TM2_18020 PF07992 Pyridine nucleotide-disulphide oxidoreductase TM2_18020 PF18267 Rubredoxin NAD+ reductase C-terminal domain TM2_18030 PF07690 Major Facilitator Superfamily TM2_18040 PF07992 Pyridine nucleotide-disulphide oxidoreductase TM2_18040 PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster TM2_18050 PF00310 Glutamine amidotransferases class-II TM2_18050 PF01493 GXGXG motif TM2_18050 PF01645 Conserved region in glutamate synthase TM2_18050 PF04898 Glutamate synthase central domain TM2_18060 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family TM2_18060 PF03466 LysR substrate binding domain TM2_18070 PF00664 ABC transporter transmembrane region TM2_18070 PF00005 ABC transporter TM2_18080 PF00664 ABC transporter transmembrane region TM2_18080 PF00005 ABC transporter TM2_18090 PF06445 GyrI-like small molecule binding domain TM2_18090 PF13411 MerR HTH family regulatory protein TM2_18100 PF00583 Acetyltransferase (GNAT) family TM2_18110 PF00171 Aldehyde dehydrogenase family TM2_18120 PF01472 PUA domain TM2_18120 PF00696 Amino acid kinase family TM2_18130 PF03807 NADP oxidoreductase coenzyme F420-dependent TM2_18130 PF14748 Pyrroline-5-carboxylate reductase dimerisation TM2_18140 PF00067 Cytochrome P450 TM2_18150 PF04879 Molybdopterin oxidoreductase Fe4S4 domain TM2_18150 PF00384 Molybdopterin oxidoreductase TM2_18150 PF01568 Molydopterin dinucleotide binding domain TM2_18160 PF00457 Glycosyl hydrolases family 11 TM2_18170 PF00370 FGGY family of carbohydrate kinases, N-terminal domain TM2_18170 PF02782 FGGY family of carbohydrate kinases, C-terminal domain TM2_18180 PF01261 Xylose isomerase-like TIM barrel TM2_18190 PF00480 ROK family TM2_18200 PF17851 Beta xylosidase C-terminal Concanavalin A-like domain TM2_18200 PF04616 Glycosyl hydrolases family 43 TM2_18220 PF01588 Putative tRNA binding domain TM2_18240 PF14158 YndJ-like protein TM2_18250 PF13761 Domain of unknown function (DUF4166) TM2_18270 PF13305 Tetracyclin repressor-like, C-terminal domain TM2_18270 PF00440 Bacterial regulatory proteins, tetR family TM2_18280 PF00753 Metallo-beta-lactamase superfamily TM2_18290 PF06445 GyrI-like small molecule binding domain TM2_18300 PF13280 WYL domain TM2_18300 PF08279 HTH domain TM2_18320 PF01022 Bacterial regulatory protein, arsR family TM2_18330 PF00324 Amino acid permease TM2_18360 PF03972 MmgE/PrpD family TM2_18370 PF00285 Citrate synthase, C-terminal domain TM2_18380 PF04238 Protein of unknown function (DUF420) TM2_18400 PF06725 3D domain TM2_18400 PF01476 LysM domain TM2_18410 PF00270 DEAD/DEAH box helicase TM2_18410 PF00271 Helicase conserved C-terminal domain TM2_18410 PF00570 HRDC domain TM2_18410 PF16124 RecQ zinc-binding TM2_18410 PF09382 RQC domain TM2_18430 PF01258 Prokaryotic dksA/traR C4-type zinc finger TM2_18450 PF08000 Bacterial PH domain TM2_18480 PF00171 Aldehyde dehydrogenase family TM2_18490 PF13249 Squalene-hopene cyclase N-terminal domain TM2_18490 PF13243 Squalene-hopene cyclase C-terminal domain TM2_18500 PF02777 Iron/manganese superoxide dismutases, C-terminal domain TM2_18500 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain TM2_18510 PF01758 Sodium Bile acid symporter family TM2_18520 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) TM2_18520 PF00364 Biotin-requiring enzyme TM2_18520 PF02817 e3 binding domain TM2_18530 PF16078 2-oxoglutarate dehydrogenase N-terminus TM2_18530 PF00676 Dehydrogenase E1 component TM2_18530 PF16870 2-oxoglutarate dehydrogenase C-terminal TM2_18530 PF02779 Transketolase, pyrimidine binding domain TM2_18540 PF00092 von Willebrand factor type A domain TM2_18550 PF07728 AAA domain (dynein-related subfamily) TM2_18560 PF13627 Prokaryotic lipoprotein-attachment site TM2_18560 PF00080 Copper/zinc superoxide dismutase (SODC) TM2_18570 PF01476 LysM domain TM2_18570 PF00877 NlpC/P60 family TM2_18580 PF10372 Bacterial membrane-spanning protein N-terminus TM2_18580 PF02457 DisA bacterial checkpoint controller nucleotide-binding TM2_18600 PF01554 MatE TM2_18610 PF02585 GlcNAc-PI de-N-acetylase TM2_18620 PF08830 Protein of unknown function (DUF1806) TM2_18640 PF00892 EamA-like transporter family TM2_18670 PF01638 HxlR-like helix-turn-helix TM2_18680 PF00881 Nitroreductase family TM2_18690 PF11755 Protein of unknown function (DUF3311) TM2_18700 PF00474 Sodium:solute symporter family TM2_18710 PF01471 Putative peptidoglycan binding domain TM2_18710 PF17820 PDZ domain TM2_18710 PF03572 Peptidase family S41 TM2_18720 PF08241 Methyltransferase domain TM2_18740 PF02557 D-alanyl-D-alanine carboxypeptidase TM2_18750 PF01048 Phosphorylase superfamily TM2_18760 PF14191 YodL-like TM2_18770 PF01569 PAP2 superfamily TM2_18780 PF14162 YozD-like protein TM2_18810 PF06855 YozE SAM-like fold TM2_18820 PF14122 YokU-like protein, putative antitoxin TM2_18830 PF12544 Lysine-2,3-aminomutase TM2_18840 PF02954 Bacterial regulatory protein, Fis family TM2_18840 PF13426 PAS domain TM2_18840 PF00158 Sigma-54 interaction domain TM2_18850 PF00535 Glycosyl transferase family 2 TM2_18880 PF12996 DUF based on E. rectale Gene description (DUF3880) TM2_18900 PF02719 Polysaccharide biosynthesis protein TM2_18910 PF01641 SelR domain TM2_18920 PF01625 Peptide methionine sulfoxide reductase TM2_18930 PF01047 MarR family TM2_18960 PF17431 Uncharacterized YmpT-like TM2_18970 PF09911 Uncharacterized protein conserved in bacteria (DUF2140) TM2_18980 PF13472 GDSL-like Lipase/Acylhydrolase family TM2_18990 PF02630 SCO1/SenC TM2_19000 PF02645 Uncharacterised protein, DegV family COG1307 TM2_19010 PF10751 Protein of unknown function (DUF2535) TM2_19020 PF00291 Pyridoxal-phosphate dependent enzyme TM2_19020 PF00585 C-terminal regulatory domain of Threonine dehydratase TM2_19030 PF08461 Ribonuclease R winged-helix domain TM2_19030 PF00158 Sigma-54 interaction domain TM2_19040 PF03006 Haemolysin-III related TM2_19060 PF00186 Dihydrofolate reductase TM2_19070 PF00303 Thymidylate synthase TM2_19080 PF04608 Phosphatidylglycerophosphatase A TM2_19090 PF14005 YpjP-like protein TM2_19100 PF04445 Putative SAM-dependent methyltransferase TM2_19110 PF06491 Disulphide isomerase TM2_19120 PF00920 Dehydratase family TM2_19130 PF13769 Virulence factor TM2_19130 PF08712 Scaffold protein Nfu/NifU N terminal TM2_19140 PF01966 HD domain TM2_19150 PF00255 Glutathione peroxidase TM2_19160 PF01268 Formate--tetrahydrofolate ligase TM2_19170 PF04204 Homoserine O-succinyltransferase TM2_19180 PF00534 Glycosyl transferases group 1 TM2_19180 PF06925 Monogalactosyldiacylglycerol (MGDG) synthase TM2_19200 PF00313 'Cold-shock' DNA-binding domain TM2_19220 PF10782 Zinc-finger TM2_19230 PF13456 Reverse transcriptase-like TM2_19240 PF02592 Putative vitamin uptake transporter TM2_19250 PF13456 Reverse transcriptase-like TM2_19260 PF01367 5'-3' exonuclease, C-terminal SAM fold TM2_19260 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain TM2_19290 PF00350 Dynamin family TM2_19300 PF04140 Isoprenylcysteine carboxyl methyltransferase (ICMT) family TM2_19310 PF02797 Chalcone and stilbene synthases, C-terminal domain TM2_19310 PF00195 Chalcone and stilbene synthases, N-terminal domain TM2_19320 PF13673 Acetyltransferase (GNAT) domain TM2_19320 PF04229 GrpB protein TM2_19330 PF01522 Polysaccharide deacetylase TM2_19340 PF00860 Permease family TM2_19360 PF02074 Carboxypeptidase Taq (M32) metallopeptidase TM2_19370 PF13307 Helicase C-terminal domain TM2_19390 PF02926 THUMP domain TM2_19390 PF01170 Putative RNA methylase family UPF0020 TM2_19400 PF05103 DivIVA protein TM2_19410 PF06908 YspA SLOG family TM2_19420 PF13482 RNase_H superfamily TM2_19430 PF00271 Helicase conserved C-terminal domain TM2_19430 PF09369 Domain of unknown function (DUF1998) TM2_19430 PF00270 DEAD/DEAH box helicase TM2_19440 PF00724 NADH:flavin oxidoreductase / NADH oxidase family TM2_19450 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 TM2_19470 PF14179 YppG-like protein TM2_19500 PF10720 Protein of unknown function (DUF2515) TM2_19510 PF03838 Recombination protein U TM2_19520 PF00912 Transglycosylase TM2_19520 PF00905 Penicillin binding protein transpeptidase domain TM2_19540 PF00730 HhH-GPD superfamily base excision DNA repair protein TM2_19540 PF10576 Iron-sulfur binding domain of endonuclease III TM2_19540 PF00633 Helix-hairpin-helix motif TM2_19550 PF07261 Replication initiation and membrane attachment TM2_19560 PF00152 tRNA synthetases class II (D, K and N) TM2_19560 PF01336 OB-fold nucleic acid binding domain TM2_19570 PF03413 Peptidase propeptide and YPEB domain TM2_19570 PF17881 Domain of unknown function (DUF5590) TM2_19580 PF14084 Protein of unknown function (DUF4264) TM2_19590 PF13307 Helicase C-terminal domain TM2_19590 PF04851 Type III restriction enzyme, res subunit TM2_19590 PF00929 Exonuclease TM2_19600 PF02261 Aspartate decarboxylase TM2_19610 PF02569 Pantoate-beta-alanine ligase TM2_19620 PF02548 Ketopantoate hydroxymethyltransferase TM2_19630 PF02237 Biotin protein ligase C terminal domain TM2_19630 PF03099 Biotin/lipoate A/B protein ligase family TM2_19630 PF08279 HTH domain TM2_19640 PF01743 Poly A polymerase head domain TM2_19640 PF12627 Probable RNA and SrmB- binding site of polymerase A TM2_19640 PF13735 tRNA nucleotidyltransferase domain 2 putative TM2_19650 PF00534 Glycosyl transferases group 1 TM2_19650 PF13439 Glycosyltransferase Family 4 TM2_19660 PF02585 GlcNAc-PI de-N-acetylase TM2_19670 PF02142 MGS-like domain TM2_19680 PF05173 Dihydrodipicolinate reductase, C-terminus TM2_19680 PF01113 Dihydrodipicolinate reductase, N-terminus TM2_19690 PF03819 MazG nucleotide pyrophosphohydrolase domain TM2_19700 PF10035 Uncharacterized protein conserved in bacteria (DUF2179) TM2_19700 PF02588 Uncharacterised 5xTM membrane BCR, YitT family COG1284 TM2_19710 PF09577 Sporulation protein YpjB (SpoYpjB) TM2_19720 PF07187 Protein of unknown function (DUF1405) TM2_19730 PF00032 Cytochrome b(C-terminal)/b6/petD TM2_19730 PF13442 Cytochrome C oxidase, cbb3-type, subunit III TM2_19740 PF00033 Cytochrome b/b6/petB TM2_19750 PF00355 Rieske [2Fe-2S] domain TM2_19760 PF10673 Protein of unknown function (DUF2487) TM2_19770 PF08864 UPF0302 domain TM2_19770 PF08858 IDEAL domain TM2_19790 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) TM2_19800 PF02153 Prephenate dehydrogenase TM2_19800 PF01842 ACT domain TM2_19810 PF00155 Aminotransferase class I and II TM2_19820 PF00290 Tryptophan synthase alpha chain TM2_19830 PF00291 Pyridoxal-phosphate dependent enzyme TM2_19840 PF00697 N-(5'phosphoribosyl)anthranilate (PRA) isomerase TM2_19850 PF00218 Indole-3-glycerol phosphate synthase TM2_19860 PF00591 Glycosyl transferase family, a/b domain TM2_19860 PF02885 Glycosyl transferase family, helical bundle domain TM2_19870 PF04715 Anthranilate synthase component I, N terminal region TM2_19870 PF00425 chorismate binding enzyme TM2_19880 PF07736 Chorismate mutase type I TM2_19890 PF01761 3-dehydroquinate synthase TM2_19900 PF01264 Chorismate synthase TM2_19910 PF03705 CheR methyltransferase, all-alpha domain TM2_19910 PF01739 CheR methyltransferase, SAM binding domain TM2_19930 PF00334 Nucleoside diphosphate kinase TM2_19940 PF00348 Polyprenyl synthetase TM2_19950 PF01209 ubiE/COQ5 methyltransferase family TM2_19960 PF07307 Heptaprenyl diphosphate synthase (HEPPP synthase) subunit 1 TM2_19970 PF02081 Tryptophan RNA-binding attenuator protein TM2_19980 PF01227 GTP cyclohydrolase I TM2_19990 PF00216 Bacterial DNA-binding protein TM2_20000 PF09547 Stage IV sporulation protein A (spore_IV_A) TM2_20020 PF10966 Protein of unknown function (DUF2768) TM2_20030 PF07479 NAD-dependent glycerol-3-phosphate dehydrogenase C-terminus TM2_20030 PF01210 NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus TM2_20040 PF14714 KH-domain-like of EngA bacterial GTPase enzymes, C-terminal TM2_20040 PF01926 50S ribosome-binding GTPase TM2_20060 PF14045 YIEGIA protein TM2_20080 PF14140 YpzI-like protein TM2_20090 PF01070 FMN-dependent dehydrogenase TM2_20100 PF00575 S1 RNA binding domain TM2_20110 PF02224 Cytidylate kinase TM2_20120 PF17313 Family of unknown function (DUF5359) TM2_20130 PF12945 Flagellar protein YcgR TM2_20130 PF07238 PilZ domain TM2_20140 PF03413 Peptidase propeptide and YPEB domain TM2_20140 PF14620 YpeB sporulation TM2_20150 PF07486 Cell Wall Hydrolase TM2_20150 PF01471 Putative peptidoglycan binding domain TM2_20160 PF13367 PrsW family intramembrane metalloprotease TM2_20180 PF00208 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase TM2_20180 PF02812 Glu/Leu/Phe/Val dehydrogenase, dimerisation domain TM2_20190 PF05389 Negative regulator of genetic competence (MecA) TM2_20200 PF00149 Calcineurin-like phosphoesterase TM2_20210 PF10864 Protein of unknown function (DUF2663) TM2_20220 PF01476 LysM domain TM2_20230 PF02517 CPBP intramembrane metalloprotease TM2_20240 PF00271 Helicase conserved C-terminal domain TM2_20240 PF00270 DEAD/DEAH box helicase TM2_20250 PF14493 Helix-turn-helix domain TM2_20270 PF12822 ECF transporter, substrate-specific component TM2_20280 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain TM2_20280 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain TM2_20280 PF01842 ACT domain TM2_20290 PF01476 LysM domain TM2_20290 PF01551 Peptidase family M23 TM2_20310 PF04542 Sigma-70 region 2 TM2_20310 PF08281 Sigma-70, region 4 TM2_20320 PF00989 PAS fold TM2_20320 PF00672 HAMP domain TM2_20320 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase TM2_20320 PF18698 Histidine kinase sensor domain TM2_20320 PF00512 His Kinase A (phospho-acceptor) domain TM2_20330 PF00486 Transcriptional regulatory protein, C terminal TM2_20330 PF00072 Response regulator receiver domain TM2_20340 PF01578 Cytochrome C assembly protein TM2_20350 PF05140 ResB-like family TM2_20360 PF00578 AhpC/TSA family TM2_20370 PF01479 S4 domain TM2_20370 PF00849 RNA pseudouridylate synthase TM2_20380 PF07670 Nucleoside recognition TM2_20390 PF07670 Nucleoside recognition TM2_20400 PF00768 D-alanyl-D-alanine carboxypeptidase TM2_20400 PF07943 Penicillin-binding protein 5, C-terminal domain TM2_20410 PF13047 Protein of unknown function (DUF3907) TM2_20420 PF04079 Segregation and condensation complex subunit ScpB TM2_20430 PF02616 Segregation and condensation protein ScpA TM2_20440 PF03745 Domain of unknown function (DUF309) TM2_20450 PF00583 Acetyltransferase (GNAT) family TM2_20460 PF00885 6,7-dimethyl-8-ribityllumazine synthase TM2_20470 PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase TM2_20470 PF00925 GTP cyclohydrolase II TM2_20480 PF00677 Lumazine binding domain TM2_20520 PF07690 Major Facilitator Superfamily TM2_20530 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD TM2_20540 PF06207 Protein of unknown function (DUF1002) TM2_20550 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain TM2_20550 PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain TM2_20560 PF03323 Bacillus/Clostridium GerA spore germination protein TM2_20570 PF14097 Stage V sporulation protein AE1 TM2_20580 PF03862 SpoVAC/SpoVAEB sporulation membrane protein TM2_20590 PF07451 Stage V sporulation protein AD (SpoVAD) TM2_20600 PF03862 SpoVAC/SpoVAEB sporulation membrane protein TM2_20610 PF13782 Stage V sporulation protein AB TM2_20620 PF12164 Stage V sporulation protein AA TM2_20630 PF04542 Sigma-70 region 2 TM2_20630 PF04545 Sigma-70, region 4 TM2_20630 PF04539 Sigma-70 region 3 TM2_20640 PF13581 Histidine kinase-like ATPase domain TM2_20650 PF01740 STAS domain TM2_20660 PF07943 Penicillin-binding protein 5, C-terminal domain TM2_20660 PF00768 D-alanyl-D-alanine carboxypeptidase TM2_20670 PF01048 Phosphorylase superfamily TM2_20680 PF01676 Metalloenzyme superfamily TM2_20690 PF02899 Phage integrase, N-terminal SAM-like domain TM2_20690 PF00589 Phage integrase family TM2_20700 PF14004 Protein of unknown function (DUF4227) TM2_20710 PF01475 Ferric uptake regulator family TM2_20720 PF01944 Stage II sporulation protein M TM2_20730 PF05922 Peptidase inhibitor I9 TM2_20730 PF00082 Subtilase family TM2_20750 PF13673 Acetyltransferase (GNAT) domain TM2_20770 PF00293 NUDIX domain TM2_20780 PF00248 Aldo/keto reductase family TM2_20820 PF12146 Serine aminopeptidase, S33 TM2_20830 PF18801 response regulator aspartate phosphatase H, N terminal TM2_20840 PF10827 Protein of unknown function (DUF2552) TM2_20850 PF01521 Iron-sulphur cluster biosynthesis TM2_20860 PF03330 Lytic transglycolase TM2_20870 PF04229 GrpB protein TM2_20870 PF13673 Acetyltransferase (GNAT) domain TM2_20880 PF00583 Acetyltransferase (GNAT) family TM2_20890 PF10787 Uncharacterised protein from bacillus cereus group TM2_20900 PF11799 impB/mucB/samB family C-terminal domain TM2_20900 PF00817 impB/mucB/samB family TM2_20910 PF08863 YolD-like protein TM2_20920 PF07690 Major Facilitator Superfamily TM2_20930 PF00485 Phosphoribulokinase / Uridine kinase family TM2_20940 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain TM2_20940 PF07992 Pyridine nucleotide-disulphide oxidoreductase TM2_20960 PF00106 short chain dehydrogenase TM2_20970 PF00753 Metallo-beta-lactamase superfamily TM2_20980 PF14748 Pyrroline-5-carboxylate reductase dimerisation TM2_20980 PF03807 NADP oxidoreductase coenzyme F420-dependent TM2_21000 PF01546 Peptidase family M20/M25/M40 TM2_21010 PF00724 NADH:flavin oxidoreductase / NADH oxidase family TM2_21020 PF12146 Serine aminopeptidase, S33 TM2_21030 PF12897 Alanine-glyoxylate amino-transferase TM2_21040 PF12706 Beta-lactamase superfamily domain TM2_21050 PF02781 Glucose-6-phosphate dehydrogenase, C-terminal domain TM2_21050 PF00479 Glucose-6-phosphate dehydrogenase, NAD binding domain TM2_21060 PF00392 Bacterial regulatory proteins, gntR family TM2_21060 PF07702 UTRA domain TM2_21070 PF00232 Glycosyl hydrolase family 1 TM2_21080 PF02378 Phosphotransferase system, EIIC TM2_21090 PF02255 PTS system, Lactose/Cellobiose specific IIA subunit TM2_21100 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit TM2_21120 PF06800 Sugar transport protein TM2_21130 PF00393 6-phosphogluconate dehydrogenase, C-terminal domain TM2_21130 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase TM2_21140 PF11798 IMS family HHH motif TM2_21140 PF00817 impB/mucB/samB family TM2_21140 PF11799 impB/mucB/samB family C-terminal domain TM2_21160 PF02096 60Kd inner membrane protein TM2_21170 PF01584 CheW-like domain TM2_21180 PF07687 Peptidase dimerisation domain TM2_21180 PF01546 Peptidase family M20/M25/M40 TM2_21190 PF01039 Carboxyl transferase domain TM2_21210 PF03734 L,D-transpeptidase catalytic domain TM2_21220 PF11728 Putative aromatic acid exporter C-terminal domain TM2_21220 PF06081 Aromatic acid exporter family member 1 TM2_21230 PF00005 ABC transporter TM2_21240 PF00528 Binding-protein-dependent transport system inner membrane component TM2_21250 PF00497 Bacterial extracellular solute-binding proteins, family 3 TM2_21260 PF06491 Disulphide isomerase TM2_21270 PF00781 Diacylglycerol kinase catalytic domain TM2_21290 PF02817 e3 binding domain TM2_21290 PF00364 Biotin-requiring enzyme TM2_21290 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) TM2_21300 PF02780 Transketolase, C-terminal domain TM2_21300 PF02779 Transketolase, pyrimidine binding domain TM2_21310 PF00676 Dehydrogenase E1 component TM2_21320 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain TM2_21320 PF07992 Pyridine nucleotide-disulphide oxidoreductase TM2_21330 PF00871 Acetokinase family TM2_21340 PF02812 Glu/Leu/Phe/Val dehydrogenase, dimerisation domain TM2_21340 PF00208 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase TM2_21350 PF01515 Phosphate acetyl/butaryl transferase TM2_21360 PF00989 PAS fold TM2_21360 PF02954 Bacterial regulatory protein, Fis family TM2_21360 PF00158 Sigma-54 interaction domain TM2_21370 PF11118 Protein of unknown function (DUF2627) TM2_21380 PF03009 Glycerophosphoryl diester phosphodiesterase family TM2_21390 PF18801 response regulator aspartate phosphatase H, N terminal TM2_21400 PF00072 Response regulator receiver domain TM2_21400 PF08769 Sporulation initiation factor Spo0A C terminal TM2_21410 PF17820 PDZ domain TM2_21410 PF05580 SpoIVB peptidase S55 TM2_21420 PF13476 AAA domain TM2_21430 PF01316 Arginine repressor, DNA binding domain TM2_21430 PF02863 Arginine repressor, C-terminal domain TM2_21440 PF01728 FtsJ-like methyltransferase TM2_21440 PF01479 S4 domain TM2_21450 PF13292 1-deoxy-D-xylulose-5-phosphate synthase TM2_21450 PF02779 Transketolase, pyrimidine binding domain TM2_21450 PF02780 Transketolase, C-terminal domain TM2_21460 PF00348 Polyprenyl synthetase TM2_21470 PF02609 Exonuclease VII small subunit TM2_21480 PF02601 Exonuclease VII, large subunit TM2_21480 PF13742 OB-fold nucleic acid binding domain TM2_21490 PF00763 Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain TM2_21490 PF02882 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain TM2_21500 PF01029 NusB family TM2_21510 PF03780 Asp23 family, cell envelope-related function TM2_21520 PF02785 Biotin carboxylase C-terminal domain TM2_21520 PF00289 Biotin carboxylase, N-terminal domain TM2_21520 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain TM2_21530 PF00364 Biotin-requiring enzyme TM2_21540 PF12685 SpoIIIAH-like protein TM2_21560 PF09581 Stage III sporulation protein AF (Spore_III_AF) TM2_21570 PF09546 Stage III sporulation protein AE (spore_III_AE) TM2_21580 PF06686 Stage III sporulation protein AC/AD protein family TM2_21590 PF06686 Stage III sporulation protein AC/AD protein family TM2_21600 PF09548 Stage III sporulation protein AB (spore_III_AB) TM2_21620 PF10942 Protein of unknown function (DUF2619) TM2_21630 PF01132 Elongation factor P (EF-P) OB domain TM2_21630 PF08207 Elongation factor P (EF-P) KOW-like domain TM2_21630 PF09285 Elongation factor P, C-terminal TM2_21640 PF01321 Creatinase/Prolidase N-terminal domain TM2_21640 PF00557 Metallopeptidase family M24 TM2_21650 PF01220 Dehydroquinase class II TM2_21660 PF11085 Conserved membrane protein YqhR TM2_21670 PF07136 Protein of unknown function (DUF1385) TM2_21690 PF01734 Patatin-like phospholipase TM2_21700 PF02742 Iron dependent repressor, metal binding and dimerisation domain TM2_21700 PF01325 Iron dependent repressor, N-terminal DNA binding domain TM2_21710 PF03099 Biotin/lipoate A/B protein ligase family TM2_21720 PF00581 Rhodanese-like domain TM2_21730 PF02347 Glycine cleavage system P-protein TM2_21740 PF02347 Glycine cleavage system P-protein TM2_21750 PF01571 Aminomethyltransferase folate-binding domain TM2_21750 PF08669 Glycine cleavage T-protein C-terminal barrel domain TM2_21760 PF00271 Helicase conserved C-terminal domain TM2_21760 PF00176 SNF2 family N-terminal domain TM2_21770 PF11079 Bacterial protein YqhG of unknown function TM2_21790 PF01381 Helix-turn-helix TM2_21790 PF08671 Anti-repressor SinI TM2_21800 PF12389 Camelysin metallo-endopeptidase TM2_21830 PF13028 Protein of unknown function (DUF3889) TM2_21840 PF14038 YqzE-like protein TM2_21880 PF07963 Prokaryotic N-terminal methylation motif TM2_21890 PF07963 Prokaryotic N-terminal methylation motif TM2_21900 PF00482 Type II secretion system (T2SS), protein F TM2_21910 PF00437 Type II/IV secretion system protein TM2_21930 PF01740 STAS domain TM2_21930 PF14361 RsbT co-antagonist protein rsbRD N-terminal domain TM2_21940 PF03960 ArsC family TM2_21950 PF11117 Protein of unknown function (DUF2626) TM2_21960 PF00753 Metallo-beta-lactamase superfamily TM2_21970 PF10958 Protein of unknown function (DUF2759) TM2_21980 PF01910 Thiamine-binding protein TM2_21990 PF07690 Major Facilitator Superfamily TM2_22000 PF00246 Zinc carboxypeptidase TM2_22010 PF00884 Sulfatase TM2_22020 PF00480 ROK family TM2_22030 PF06014 Bacterial protein of unknown function (DUF910) TM2_22040 PF01694 Rhomboid family TM2_22070 PF01812 5-formyltetrahydrofolate cyclo-ligase family TM2_22080 PF00471 Ribosomal protein L33 TM2_22120 PF00005 ABC transporter TM2_22130 PF00005 ABC transporter TM2_22140 PF00528 Binding-protein-dependent transport system inner membrane component TM2_22150 PF00528 Binding-protein-dependent transport system inner membrane component TM2_22160 PF12849 PBP superfamily domain TM2_22170 PF03717 Penicillin-binding Protein dimerisation domain TM2_22170 PF00905 Penicillin binding protein transpeptidase domain TM2_22180 PF07690 Major Facilitator Superfamily TM2_22190 PF02777 Iron/manganese superoxide dismutases, C-terminal domain TM2_22190 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain TM2_22200 PF04306 Protein of unknown function (DUF456) TM2_22210 PF06691 Protein of unknown function (DUF1189) TM2_22220 PF13302 Acetyltransferase (GNAT) domain TM2_22240 PF04551 GcpE protein TM2_22270 PF00480 ROK family TM2_22280 PF01475 Ferric uptake regulator family TM2_22290 PF00950 ABC 3 transport family TM2_22300 PF00005 ABC transporter TM2_22310 PF10035 Uncharacterized protein conserved in bacteria (DUF2179) TM2_22310 PF02588 Uncharacterised 5xTM membrane BCR, YitT family COG1284 TM2_22320 PF11116 Protein of unknown function (DUF2624) TM2_22330 PF01261 Xylose isomerase-like TIM barrel TM2_22340 PF00270 DEAD/DEAH box helicase TM2_22340 PF00271 Helicase conserved C-terminal domain TM2_22360 PF02401 LytB protein TM2_22370 PF01784 NIF3 (NGG1p interacting factor 3) TM2_22380 PF04816 tRNA (adenine(22)-N(1))-methyltransferase TM2_22390 PF13442 Cytochrome C oxidase, cbb3-type, subunit III TM2_22400 PF04545 Sigma-70, region 4 TM2_22400 PF04539 Sigma-70 region 3 TM2_22400 PF00140 Sigma-70 factor, region 1.2 TM2_22400 PF03979 Sigma-70 factor, region 1.1 TM2_22400 PF04542 Sigma-70 region 2 TM2_22410 PF10410 DnaB-helicase binding domain of primase TM2_22410 PF08275 DNA primase catalytic core, N-terminal domain TM2_22410 PF01807 CHC2 zinc finger TM2_22420 PF02639 Uncharacterized BCR, YaiI/YqxD family COG1671 TM2_22430 PF03618 Kinase/pyrophosphorylase TM2_22440 PF00571 CBS domain TM2_22440 PF08279 HTH domain TM2_22450 PF02092 Glycyl-tRNA synthetase beta subunit TM2_22460 PF02091 Glycyl-tRNA synthetase alpha subunit TM2_22470 PF02565 Recombination protein O C terminal TM2_22470 PF11967 Recombination protein O N terminal TM2_22480 PF14006 YqzL-like protein TM2_22490 PF07650 KH domain TM2_22490 PF01926 50S ribosome-binding GTPase TM2_22500 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region TM2_22510 PF01219 Prokaryotic diacylglycerol kinase TM2_22520 PF02130 Uncharacterized protein family UPF0054 TM2_22530 PF07698 7TM receptor with intracellular HD hydrolase TM2_22530 PF07697 7TM-HD extracellular TM2_22530 PF01966 HD domain TM2_22540 PF02562 PhoH-like protein TM2_22550 PF06898 Putative stage IV sporulation protein YqfD TM2_22560 PF07873 YabP family TM2_22580 PF12127 SigmaW regulon antibacterial TM2_22590 PF01972 Serine dehydrogenase proteinase TM2_22590 PF01957 NfeD-like C-terminal, partner-binding TM2_22600 PF09424 Yqey-like protein TM2_22610 PF01165 Ribosomal protein S21 TM2_22620 PF02690 Na+/Pi-cotransporter TM2_22630 PF04055 Radical SAM superfamily TM2_22630 PF01938 TRAM domain TM2_22630 PF00919 Uncharacterized protein family UPF0004 TM2_22640 PF04452 RNA methyltransferase TM2_22660 PF00226 DnaJ domain TM2_22660 PF01556 DnaJ C terminal domain TM2_22660 PF00684 DnaJ central domain TM2_22670 PF00012 Hsp70 protein TM2_22680 PF01025 GrpE TM2_22690 PF01628 HrcA protein C terminal domain TM2_22700 PF04055 Radical SAM superfamily TM2_22700 PF06969 HemN C-terminal domain TM2_22710 PF00679 Elongation factor G C-terminus TM2_22710 PF03144 Elongation factor Tu domain 2 TM2_22710 PF00009 Elongation factor Tu GTP binding domain TM2_22710 PF06421 GTP-binding protein LepA C-terminus TM2_22720 PF12438 Protein of unknown function (DUF3679) TM2_22730 PF07454 Stage II sporulation protein P (SpoIIP) TM2_22740 PF03418 Germination protease TM2_22750 PF01649 Ribosomal protein S20 TM2_22760 PF06144 DNA polymerase III, delta subunit TM2_22770 PF14141 YqzM-like protein TM2_22780 PF00753 Metallo-beta-lactamase superfamily TM2_22780 PF13567 Domain of unknown function (DUF4131) TM2_22780 PF03772 Competence protein TM2_22790 PF03772 Competence protein TM2_22790 PF13567 Domain of unknown function (DUF4131) TM2_22790 PF00753 Metallo-beta-lactamase superfamily TM2_22800 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region TM2_22810 PF10531 SLBB domain TM2_22820 PF03807 NADP oxidoreductase coenzyme F420-dependent TM2_22820 PF14748 Pyrroline-5-carboxylate reductase dimerisation TM2_22830 PF13649 Methyltransferase domain TM2_22850 PF01966 HD domain TM2_22860 PF01467 Cytidylyltransferase-like TM2_22870 PF01985 CRS1 / YhbY (CRM) domain TM2_22880 PF18317 Shikimate 5'-dehydrogenase C-terminal domain TM2_22880 PF01488 Shikimate / quinate 5-dehydrogenase TM2_22880 PF08501 Shikimate dehydrogenase substrate binding domain TM2_22890 PF01926 50S ribosome-binding GTPase TM2_22920 PF00657 GDSL-like Lipase/Acylhydrolase TM2_22930 PF01522 Polysaccharide deacetylase TM2_22940 PF13176 Tetratricopeptide repeat TM2_22940 PF18801 response regulator aspartate phosphatase H, N terminal TM2_22950 PF04545 Sigma-70, region 4 TM2_22950 PF04542 Sigma-70 region 2 TM2_22980 PF13344 Haloacid dehalogenase-like hydrolase TM2_22980 PF00293 NUDIX domain TM2_22990 PF01522 Polysaccharide deacetylase TM2_22990 PF13739 Deacetylase PdaC TM2_22990 PF11738 Protein of unknown function (DUF3298) TM2_23020 PF09221 Bacteriocin class IId cyclical uberolysin-like TM2_23060 PF00005 ABC transporter TM2_23100 PF00083 Sugar (and other) transporter TM2_23110 PF11762 L-arabinose isomerase C-terminal domain TM2_23110 PF02610 L-arabinose isomerase TM2_23120 PF00596 Class II Aldolase and Adducin N-terminal domain TM2_23150 PF00392 Bacterial regulatory proteins, gntR family TM2_23170 PF01047 MarR family TM2_23190 PF01380 SIS domain TM2_23200 PF00215 Orotidine 5'-phosphate decarboxylase / HUMPS family TM2_23210 PF01638 HxlR-like helix-turn-helix TM2_23220 PF07859 alpha/beta hydrolase fold TM2_23240 PF14176 YxiJ-like protein TM2_23340 PF00905 Penicillin binding protein transpeptidase domain TM2_23350 PF02770 Acyl-CoA dehydrogenase, middle domain TM2_23350 PF02771 Acyl-CoA dehydrogenase, N-terminal domain TM2_23350 PF08028 Acyl-CoA dehydrogenase, C-terminal domain TM2_23360 PF00005 ABC transporter TM2_23370 PF00497 Bacterial extracellular solute-binding proteins, family 3 TM2_23380 PF00528 Binding-protein-dependent transport system inner membrane component TM2_23390 PF00528 Binding-protein-dependent transport system inner membrane component TM2_23400 PF05067 Manganese containing catalase TM2_23410 PF08240 Alcohol dehydrogenase GroES-like domain TM2_23410 PF00107 Zinc-binding dehydrogenase TM2_23440 PF00465 Iron-containing alcohol dehydrogenase TM2_23450 PF01235 Sodium:alanine symporter family TM2_23460 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family TM2_23460 PF03466 LysR substrate binding domain TM2_23500 PF00005 ABC transporter TM2_23510 PF00107 Zinc-binding dehydrogenase TM2_23510 PF08240 Alcohol dehydrogenase GroES-like domain TM2_23520 PF08241 Methyltransferase domain TM2_23550 PF09501 Probable sporulation protein (Bac_small_yrzI) TM2_23560 PF14143 YrhC-like protein TM2_23570 PF01053 Cys/Met metabolism PLP-dependent enzyme TM2_23580 PF00291 Pyridoxal-phosphate dependent enzyme TM2_23590 PF01048 Phosphorylase superfamily TM2_23600 PF13649 Methyltransferase domain TM2_23610 PF10750 Protein of unknown function (DUF2536) TM2_23620 PF07423 Domain of unknown function (DUF1510) TM2_23630 PF03717 Penicillin-binding Protein dimerisation domain TM2_23630 PF00905 Penicillin binding protein transpeptidase domain TM2_23640 PF01272 Transcription elongation factor, GreA/GreB, C-term TM2_23640 PF03449 Transcription elongation factor, N-terminal TM2_23650 PF00485 Phosphoribulokinase / Uridine kinase family TM2_23660 PF01136 Peptidase family U32 TM2_23660 PF16325 Peptidase family U32 C-terminal domain TM2_23670 PF01136 Peptidase family U32 TM2_23680 PF01596 O-methyltransferase TM2_23690 PF02618 YceG-like family TM2_23700 PF02803 Thiolase, C-terminal domain TM2_23700 PF00108 Thiolase, N-terminal domain TM2_23710 PF00501 AMP-binding enzyme TM2_23710 PF13193 AMP-binding enzyme C-terminal domain TM2_23720 PF02632 BioY family TM2_23730 PF06949 Protein of unknown function (DUF1292) TM2_23740 PF03652 Holliday junction resolvase TM2_23750 PF06135 IreB regulatory phosphoprotein TM2_23760 PF02272 DHHA1 domain TM2_23760 PF01411 tRNA synthetases class II (A) TM2_23760 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain TM2_23770 PF01594 AI-2E family transporter TM2_23780 PF00005 ABC transporter TM2_23790 PF00497 Bacterial extracellular solute-binding proteins, family 3 TM2_23800 PF00528 Binding-protein-dependent transport system inner membrane component TM2_23810 PF00528 Binding-protein-dependent transport system inner membrane component TM2_23840 PF05239 PRC-barrel domain TM2_23850 PF13538 UvrD-like helicase C-terminal domain TM2_23850 PF18335 ATP-dependent RecD-like DNA helicase SH3 domain TM2_23850 PF14490 Helix-hairpin-helix containing domain TM2_23860 PF13181 Tetratricopeptide repeat TM2_23860 PF07719 Tetratricopeptide repeat TM2_23880 PF00266 Aminotransferase class-V TM2_23890 PF02082 Transcriptional regulator TM2_23900 PF12002 MgsA AAA+ ATPase C terminal TM2_23900 PF05496 Holliday junction DNA helicase RuvB P-loop domain TM2_23900 PF16193 AAA C-terminal domain TM2_23910 PF00899 ThiF family TM2_23920 PF02938 GAD domain TM2_23920 PF00152 tRNA synthetases class II (D, K and N) TM2_23920 PF01336 OB-fold nucleic acid binding domain TM2_23930 PF03129 Anticodon binding domain TM2_23930 PF13393 Histidyl-tRNA synthetase TM2_23950 PF08239 Bacterial SH3 domain TM2_23950 PF01520 N-acetylmuramoyl-L-alanine amidase TM2_23960 PF02580 D-Tyr-tRNA(Tyr) deacylase TM2_23970 PF02824 TGS domain TM2_23970 PF04607 Region found in RelA / SpoT proteins TM2_23970 PF13291 ACT domain TM2_23980 PF00156 Phosphoribosyl transferase domain TM2_23990 PF17768 RecJ OB domain TM2_23990 PF02272 DHHA1 domain TM2_23990 PF10141 Single-strand DNA-specific exonuclease, C terminal domain TM2_23990 PF01368 DHH family TM2_24000 PF06305 Lipopolysaccharide assembly protein A domain TM2_24010 PF02080 TrkA-C domain TM2_24020 PF07549 SecD/SecF GG Motif TM2_24020 PF02355 Protein export membrane protein TM2_24030 PF13797 Post-transcriptional regulator TM2_24040 PF14667 Polysaccharide biosynthesis C-terminal domain TM2_24040 PF01943 Polysaccharide biosynthesis protein TM2_24050 PF04239 Protein of unknown function (DUF421) TM2_24060 PF12670 Protein of unknown function (DUF3792) TM2_24070 PF02699 Preprotein translocase subunit TM2_24080 PF01702 Queuine tRNA-ribosyltransferase TM2_24090 PF02547 Queuosine biosynthesis protein TM2_24100 PF11146 Protein of unknown function (DUF2905) TM2_24110 PF17864 RuvB AAA lid domain TM2_24110 PF05491 RuvB C-terminal winged helix domain TM2_24110 PF05496 Holliday junction DNA helicase RuvB P-loop domain TM2_24120 PF07499 RuvA, C-terminal domain TM2_24120 PF01330 RuvA N terminal domain TM2_24130 PF08955 BofC C-terminal domain TM2_24130 PF08977 Bypass of Forespore C, N terminal TM2_24170 PF01964 Radical SAM ThiC family TM2_24170 PF13667 ThiC-associated domain TM2_24190 PF09580 Sporulation lipoprotein YhcN/YlaJ (Spore_YhcN_YlaJ) TM2_24200 PF01476 LysM domain TM2_24210 PF02445 Quinolinate synthetase A protein TM2_24220 PF01729 Quinolinate phosphoribosyl transferase, C-terminal domain TM2_24220 PF02749 Quinolinate phosphoribosyl transferase, N-terminal domain TM2_24230 PF00890 FAD binding domain TM2_24230 PF02910 Fumarate reductase flavoprotein C-term TM2_24240 PF00266 Aminotransferase class-V TM2_24250 PF02829 3H domain TM2_24250 PF08279 HTH domain TM2_24260 PF01842 ACT domain TM2_24260 PF00800 Prephenate dehydratase TM2_24270 PF01842 ACT domain TM2_24280 PF09269 Domain of unknown function (DUF1967) TM2_24280 PF01018 GTP1/OBG TM2_24280 PF01926 50S ribosome-binding GTPase TM2_24290 PF14682 Sporulation initiation phospho-transferase B, C-terminal TM2_24290 PF14689 Sensor_kinase_SpoOB-type, alpha-helical domain TM2_24300 PF01016 Ribosomal L27 protein TM2_24310 PF04327 Cysteine protease Prp TM2_24320 PF00829 Ribosomal prokaryotic L21 protein TM2_24330 PF02163 Peptidase family M50 TM2_24340 PF01551 Peptidase family M23 TM2_24350 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain TM2_24360 PF03775 Septum formation inhibitor MinC, C-terminal domain TM2_24370 PF04093 rod shape-determining protein MreD TM2_24380 PF04085 rod shape-determining protein MreC TM2_24400 PF04002 RadC-like JAB domain TM2_24410 PF02545 Maf-like protein TM2_24440 PF02875 Mur ligase family, glutamate ligase domain TM2_24440 PF08245 Mur ligase middle domain TM2_24450 PF10458 Valyl tRNA synthetase tRNA binding arm TM2_24450 PF08264 Anticodon-binding domain of tRNA TM2_24450 PF00133 tRNA synthetases class I (I, L, M and V) TM2_24480 PF01476 LysM domain TM2_24490 PF00202 Aminotransferase class-III TM2_24500 PF00490 Delta-aminolevulinic acid dehydratase TM2_24510 PF02602 Uroporphyrinogen-III synthase HemD TM2_24520 PF01379 Porphobilinogen deaminase, dipyromethane cofactor binding domain TM2_24520 PF03900 Porphobilinogen deaminase, C-terminal domain TM2_24530 PF01578 Cytochrome C assembly protein TM2_24540 PF00745 Glutamyl-tRNAGlu reductase, dimerisation domain TM2_24540 PF01488 Shikimate / quinate 5-dehydrogenase TM2_24540 PF05201 Glutamyl-tRNAGlu reductase, N-terminal domain TM2_24590 PF01926 50S ribosome-binding GTPase TM2_24600 PF00004 ATPase family associated with various cellular activities (AAA) TM2_24600 PF05362 Lon protease (S16) C-terminal proteolytic domain TM2_24600 PF02190 ATP-dependent protease La (LON) substrate-binding domain TM2_24610 PF00004 ATPase family associated with various cellular activities (AAA) TM2_24610 PF05362 Lon protease (S16) C-terminal proteolytic domain TM2_24620 PF10431 C-terminal, D2-small domain, of ClpB protein TM2_24620 PF07724 AAA domain (Cdc48 subfamily) TM2_24620 PF06689 ClpX C4-type zinc finger TM2_24630 PF05698 Bacterial trigger factor protein (TF) C-terminus TM2_24630 PF05697 Bacterial trigger factor protein (TF) TM2_24630 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase TM2_24650 PF00694 Aconitase C-terminal domain TM2_24660 PF00330 Aconitase family (aconitate hydratase) TM2_24670 PF00180 Isocitrate/isopropylmalate dehydrogenase TM2_24680 PF00682 HMGL-like TM2_24680 PF08502 LeuA allosteric (dimerisation) domain TM2_24690 PF01450 Acetohydroxy acid isomeroreductase, catalytic domain TM2_24690 PF07991 Acetohydroxy acid isomeroreductase, NADPH-binding domain TM2_24700 PF01842 ACT domain TM2_24700 PF10369 Small subunit of acetolactate synthase TM2_24710 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain TM2_24710 PF00205 Thiamine pyrophosphate enzyme, central domain TM2_24710 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain TM2_24720 PF01063 Amino-transferase class IV TM2_24730 PF10282 Lactonase, 7-bladed beta-propeller TM2_24740 PF06803 Protein of unknown function (DUF1232) TM2_24750 PF04914 DltD protein TM2_24760 PF00550 Phosphopantetheine attachment site TM2_24770 PF03062 MBOAT, membrane-bound O-acyltransferase family TM2_24780 PF00501 AMP-binding enzyme TM2_24780 PF13193 AMP-binding enzyme C-terminal domain TM2_24790 PF12459 D-Ala-teichoic acid biosynthesis protein TM2_24880 PF00589 Phage integrase family TM2_24910 PF12850 Calcineurin-like phosphoesterase superfamily domain TM2_24920 PF01725 Ham1 family TM2_24930 PF03725 3' exoribonuclease family, domain 2 TM2_24930 PF01138 3' exoribonuclease family, domain 1 TM2_24940 PF10646 Sporulation and spore germination TM2_24950 PF01177 Asp/Glu/Hydantoin racemase TM2_24960 PF01047 MarR family TM2_24970 PF00196 Bacterial regulatory proteins, luxR family TM2_24980 PF03600 Citrate transporter TM2_24990 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family TM2_24990 PF03466 LysR substrate binding domain TM2_25000 PF04303 PrpF protein TM2_25010 PF02237 Biotin protein ligase C terminal domain TM2_25010 PF03099 Biotin/lipoate A/B protein ligase family TM2_25020 PF03061 Thioesterase superfamily TM2_25030 PF13085 2Fe-2S iron-sulfur cluster binding domain TM2_25030 PF13183 4Fe-4S dicluster domain TM2_25040 PF00890 FAD binding domain TM2_25040 PF02910 Fumarate reductase flavoprotein C-term TM2_25050 PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit TM2_25060 PF10702 Protein of unknown function (DUF2507) TM2_25070 PF13840 ACT domain TM2_25070 PF00696 Amino acid kinase family TM2_25070 PF01842 ACT domain TM2_25080 PF01541 GIY-YIG catalytic domain TM2_25080 PF02151 UvrB/uvrC motif TM2_25080 PF08459 UvrC Helix-hairpin-helix N-terminal TM2_25090 PF00085 Thioredoxin TM2_25100 PF06964 Alpha-L-arabinofuranosidase C-terminal domain TM2_25110 PF01012 Electron transfer flavoprotein domain TM2_25110 PF00766 Electron transfer flavoprotein FAD-binding domain TM2_25120 PF01012 Electron transfer flavoprotein domain TM2_25130 PF00378 Enoyl-CoA hydratase/isomerase TM2_25140 PF00440 Bacterial regulatory proteins, tetR family TM2_25140 PF08359 YsiA-like protein, C-terminal region TM2_25150 PF00501 AMP-binding enzyme TM2_25150 PF13193 AMP-binding enzyme C-terminal domain TM2_25170 PF03994 Domain of Unknown Function (DUF350) TM2_25180 PF00488 MutS domain V TM2_25180 PF01713 Smr domain TM2_25190 PF14791 DNA polymerase beta thumb TM2_25190 PF14716 Helix-hairpin-helix domain TM2_25190 PF02811 PHP domain TM2_25200 PF02674 Colicin V production protein TM2_25210 PF05164 Cell division protein ZapA TM2_25220 PF01351 Ribonuclease HII TM2_25220 PF11858 Domain of unknown function (DUF3378) TM2_25230 PF03147 Ferredoxin-fold anticodon binding domain TM2_25230 PF03484 tRNA synthetase B5 domain TM2_25230 PF01588 Putative tRNA binding domain TM2_25230 PF17759 Phenylalanyl tRNA synthetase beta chain CLM domain TM2_25230 PF03483 B3/4 domain TM2_25240 PF01409 tRNA synthetases class II core domain (F) TM2_25240 PF02912 Aminoacyl tRNA synthetase class II, N-terminal domain TM2_25250 PF08032 RNA 2'-O ribose methyltransferase substrate binding TM2_25250 PF00588 SpoU rRNA Methylase family TM2_25260 PF14098 Small, acid-soluble spore protein I TM2_25270 PF13722 5TM C-terminal transporter carbon starvation CstA TM2_25270 PF02554 Carbon starvation protein CstA TM2_25280 PF05343 M42 glutamyl aminopeptidase TM2_25300 PF06961 Protein of unknown function (DUF1294) TM2_25310 PF00453 Ribosomal protein L20 TM2_25320 PF01632 Ribosomal protein L35 TM2_25330 PF05198 Translation initiation factor IF-3, N-terminal domain TM2_25330 PF00707 Translation initiation factor IF-3, C-terminal domain TM2_25350 PF13419 Haloacid dehalogenase-like hydrolase TM2_25360 PF08447 PAS fold TM2_25360 PF13426 PAS domain TM2_25360 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain TM2_25370 PF03129 Anticodon binding domain TM2_25370 PF02824 TGS domain TM2_25370 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) TM2_25370 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain TM2_25380 PF08812 YtxC-like family TM2_25390 PF09335 SNARE associated Golgi protein TM2_25400 PF07319 Primosomal protein DnaI N-terminus TM2_25400 PF01695 IstB-like ATP binding protein TM2_25410 PF07261 Replication initiation and membrane attachment TM2_25420 PF03477 ATP cone domain TM2_25440 PF02675 S-adenosylmethionine decarboxylase TM2_25450 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain TM2_25450 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain TM2_25460 PF01121 Dephospho-CoA kinase TM2_25470 PF02659 Putative manganese efflux pump TM2_25480 PF01149 Formamidopyrimidine-DNA glycosylase N-terminal domain TM2_25480 PF06831 Formamidopyrimidine-DNA glycosylase H2TH domain TM2_25480 PF06827 Zinc finger found in FPG and IleRS TM2_25490 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain TM2_25490 PF00476 DNA polymerase family A TM2_25490 PF01367 5'-3' exonuclease, C-terminal SAM fold TM2_25500 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase TM2_25500 PF00512 His Kinase A (phospho-acceptor) domain TM2_25500 PF00989 PAS fold TM2_25500 PF16736 Single Cache-like TM2_25510 PF00072 Response regulator receiver domain TM2_25510 PF00486 Transcriptional regulatory protein, C terminal TM2_25520 PF02866 lactate/malate dehydrogenase, alpha/beta C-terminal domain TM2_25520 PF00056 lactate/malate dehydrogenase, NAD binding domain TM2_25530 PF00180 Isocitrate/isopropylmalate dehydrogenase TM2_25540 PF00285 Citrate synthase, C-terminal domain TM2_25550 PF04284 Protein of unknown function (DUF441) TM2_25560 PF01594 AI-2E family transporter TM2_25570 PF04186 FxsA cytoplasmic membrane protein TM2_25580 PF02887 Pyruvate kinase, alpha/beta domain TM2_25580 PF00224 Pyruvate kinase, barrel domain TM2_25580 PF00391 PEP-utilising enzyme, mobile domain TM2_25590 PF00365 Phosphofructokinase TM2_25600 PF03255 Acetyl co-enzyme A carboxylase carboxyltransferase alpha subunit TM2_25610 PF17848 Acetyl-coA carboxylase zinc finger domain TM2_25610 PF01039 Carboxyl transferase domain TM2_25620 PF03949 Malic enzyme, NAD binding domain TM2_25620 PF00390 Malic enzyme, N-terminal domain TM2_25630 PF17657 Bacterial DNA polymerase III alpha subunit finger domain TM2_25630 PF14579 Helix-hairpin-helix motif TM2_25630 PF02811 PHP domain TM2_25630 PF01336 OB-fold nucleic acid binding domain TM2_25630 PF07733 Bacterial DNA polymerase III alpha NTPase domain TM2_25640 PF14034 Sporulation protein YtrH TM2_25670 PF01368 DHH family TM2_25670 PF02272 DHHA1 domain TM2_25680 PF14007 YtpI-like protein TM2_25690 PF00392 Bacterial regulatory proteins, gntR family TM2_25690 PF03061 Thioesterase superfamily TM2_25690 PF00571 CBS domain TM2_25690 PF07085 DRTGG domain TM2_25730 PF00206 Lyase TM2_25730 PF14698 Argininosuccinate lyase C-terminal TM2_25740 PF00764 Arginosuccinate synthase TM2_25750 PF00994 Probable molybdopterin binding domain TM2_25760 PF00871 Acetokinase family TM2_25770 PF02384 N-6 DNA Methylase TM2_25780 PF08534 Redoxin TM2_25790 PF09579 Sporulation protein YtfJ (Spore_YtfJ) TM2_25800 PF11167 Protein of unknown function (DUF2953) TM2_25810 PF06271 RDD family TM2_25820 PF01343 Peptidase family S49 TM2_25830 PF01513 ATP-NAD kinase TM2_25840 PF00271 Helicase conserved C-terminal domain TM2_25840 PF03880 DbpA RNA binding domain TM2_25840 PF00270 DEAD/DEAH box helicase TM2_25850 PF00487 Fatty acid desaturase TM2_25860 PF07730 Histidine kinase TM2_25870 PF00196 Bacterial regulatory proteins, luxR family TM2_25870 PF00072 Response regulator receiver domain TM2_25880 PF01497 Periplasmic binding protein TM2_25890 PF00072 Response regulator receiver domain TM2_25890 PF00486 Transcriptional regulatory protein, C terminal TM2_25900 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase TM2_25910 PF00005 ABC transporter TM2_25920 PF02687 FtsX-like permease family TM2_25930 PF01979 Amidohydrolase family TM2_25940 PF02525 Flavodoxin-like fold TM2_25990 PF01810 LysE type translocator TM2_26000 PF13193 AMP-binding enzyme C-terminal domain TM2_26000 PF00501 AMP-binding enzyme TM2_26010 PF00269 Small, acid-soluble spore proteins, alpha/beta type TM2_26020 PF02926 THUMP domain TM2_26020 PF02568 Thiamine biosynthesis protein (ThiI) TM2_26030 PF00266 Aminotransferase class-V TM2_26040 PF05525 Branched-chain amino acid transport protein TM2_26050 PF05525 Branched-chain amino acid transport protein TM2_26060 PF06160 Septation ring formation regulator, EzrA TM2_26070 PF02811 PHP domain TM2_26080 PF00440 Bacterial regulatory proteins, tetR family TM2_26090 PF13185 GAF domain TM2_26100 PF00163 Ribosomal protein S4/S9 N-terminal domain TM2_26100 PF01479 S4 domain TM2_26120 PF00857 Isochorismatase family TM2_26140 PF01674 Lipase (class 2) TM2_26150 PF03992 Antibiotic biosynthesis monooxygenase TM2_26160 PF01479 S4 domain TM2_26160 PF00579 tRNA synthetases class I (W and Y) TM2_26170 PF00501 AMP-binding enzyme TM2_26170 PF13193 AMP-binding enzyme C-terminal domain TM2_26180 PF00583 Acetyltransferase (GNAT) family TM2_26190 PF00571 CBS domain TM2_26200 PF00850 Histone deacetylase domain TM2_26210 PF00356 Bacterial regulatory proteins, lacI family TM2_26220 PF00793 DAHP synthetase I family TM2_26220 PF01817 Chorismate mutase type II TM2_26230 PF11009 Protein of unknown function (DUF2847) TM2_26240 PF12732 YtxH-like protein TM2_26250 PF06103 Bacterial protein of unknown function (DUF948) TM2_26260 PF01225 Mur ligase family, catalytic domain TM2_26260 PF02875 Mur ligase family, glutamate ligase domain TM2_26260 PF08245 Mur ligase middle domain TM2_26270 PF01580 FtsK/SpoIIIE family TM2_26270 PF17854 FtsK alpha domain TM2_26270 PF09397 Ftsk gamma domain TM2_26280 PF14794 Domain of unknown function (DUF4479) TM2_26280 PF01588 Putative tRNA binding domain TM2_26290 PF07285 Protein of unknown function (DUF1444) TM2_26300 PF00085 Thioredoxin TM2_26320 PF11071 Nucleoside 2-deoxyribosyltransferase YtoQ TM2_26330 PF05343 M42 glutamyl aminopeptidase TM2_26340 PF03413 Peptidase propeptide and YPEB domain TM2_26350 PF03949 Malic enzyme, NAD binding domain TM2_26350 PF00390 Malic enzyme, N-terminal domain TM2_26360 PF00753 Metallo-beta-lactamase superfamily TM2_26370 PF02390 Putative methyltransferase TM2_26380 PF14165 YtzH-like protein TM2_26390 PF01636 Phosphotransferase enzyme family TM2_26400 PF00781 Diacylglycerol kinase catalytic domain TM2_26430 PF00291 Pyridoxal-phosphate dependent enzyme TM2_26440 PF03575 Peptidase family S51 TM2_26450 PF01546 Peptidase family M20/M25/M40 TM2_26460 PF00860 Permease family TM2_26470 PF08220 DeoR-like helix-turn-helix domain TM2_26480 PF01479 S4 domain TM2_26480 PF00849 RNA pseudouridylate synthase TM2_26490 PF14667 Polysaccharide biosynthesis C-terminal domain TM2_26490 PF01943 Polysaccharide biosynthesis protein TM2_26520 PF02028 BCCT, betaine/carnitine/choline family transporter TM2_26530 PF03691 Uncharacterised protein family (UPF0167) TM2_26540 PF10957 Sporulation protein Cse60 TM2_26550 PF00581 Rhodanese-like domain TM2_26560 PF04854 Protein of unknown function, DUF624 TM2_26570 PF01408 Oxidoreductase family, NAD-binding Rossmann fold TM2_26570 PF02894 Oxidoreductase family, C-terminal alpha/beta domain TM2_26590 PF07470 Glycosyl Hydrolase Family 88 TM2_26600 PF00528 Binding-protein-dependent transport system inner membrane component TM2_26610 PF12833 Helix-turn-helix domain TM2_26610 PF17853 GGDEF-like domain TM2_26620 PF01638 HxlR-like helix-turn-helix TM2_26630 PF07690 Major Facilitator Superfamily TM2_26640 PF00248 Aldo/keto reductase family TM2_26650 PF13416 Bacterial extracellular solute-binding protein TM2_26660 PF00528 Binding-protein-dependent transport system inner membrane component TM2_26670 PF01370 NAD dependent epimerase/dehydratase family TM2_26680 PF01738 Dienelactone hydrolase family TM2_26690 PF13603 Leucyl-tRNA synthetase, Domain 2 TM2_26690 PF09334 tRNA synthetases class I (M) TM2_26690 PF08264 Anticodon-binding domain of tRNA TM2_26690 PF00133 tRNA synthetases class I (I, L, M and V) TM2_26700 PF14074 Protein of unknown function (DUF4257) TM2_26710 PF13426 PAS domain TM2_26710 PF01740 STAS domain TM2_26720 PF04791 LMBR1-like membrane protein TM2_26730 PF12704 MacB-like periplasmic core domain TM2_26730 PF02687 FtsX-like permease family TM2_26740 PF00005 ABC transporter TM2_26760 PF00005 ABC transporter TM2_26770 PF00392 Bacterial regulatory proteins, gntR family TM2_26800 PF10732 Protein of unknown function (DUF2524) TM2_26810 PF04055 Radical SAM superfamily TM2_26810 PF16199 Radical_SAM C-terminal domain TM2_26820 PF06962 Putative rRNA methylase TM2_26830 PF07070 SpoOM protein TM2_26840 PF10776 Protein of unknown function (DUF2600) TM2_26850 PF12146 Serine aminopeptidase, S33 TM2_26860 PF00132 Bacterial transferase hexapeptide (six repeats) TM2_26870 PF00733 Asparagine synthase TM2_26870 PF13537 Glutamine amidotransferase domain TM2_26880 PF02773 S-adenosylmethionine synthetase, C-terminal domain TM2_26880 PF02772 S-adenosylmethionine synthetase, central domain TM2_26880 PF00438 S-adenosylmethionine synthetase, N-terminal domain TM2_26890 PF01293 Phosphoenolpyruvate carboxykinase TM2_26900 PF10763 Protein of unknown function (DUF2584) TM2_26910 PF00326 Prolyl oligopeptidase family TM2_26920 PF01593 Flavin containing amine oxidoreductase TM2_26930 PF00535 Glycosyl transferase family 2 TM2_26970 PF00005 ABC transporter TM2_26980 PF00528 Binding-protein-dependent transport system inner membrane component TM2_26990 PF00293 NUDIX domain TM2_27000 PF02342 TerD domain TM2_27030 PF05105 Bacteriophage holin family TM2_27050 PF00210 Ferritin-like domain TM2_27070 PF13115 YtkA-like TM2_27080 PF02664 S-Ribosylhomocysteinase (LuxS) TM2_27090 PF01809 Putative membrane protein insertion efficiency factor TM2_27100 PF00484 Carbonic anhydrase TM2_27110 PF01297 Zinc-uptake complex component A periplasmic TM2_27110 PF09223 ZinT (YodA) periplasmic lipocalin-like zinc-recruitment TM2_27120 PF01197 Ribosomal protein L31 TM2_27130 PF01654 Cytochrome bd terminal oxidase subunit I TM2_27140 PF02322 Cytochrome bd terminal oxidase subunit II TM2_27150 PF07561 Domain of Unknown Function (DUF1540) TM2_27170 PF13378 Enolase C-terminal domain-like TM2_27170 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain TM2_27180 PF00501 AMP-binding enzyme TM2_27180 PF13193 AMP-binding enzyme C-terminal domain TM2_27190 PF00378 Enoyl-CoA hydratase/isomerase TM2_27200 PF00561 alpha/beta hydrolase fold TM2_27210 PF16582 Middle domain of thiamine pyrophosphate TM2_27210 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain TM2_27210 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain TM2_27220 PF00425 chorismate binding enzyme TM2_27230 PF01040 UbiA prenyltransferase family TM2_27240 PF01258 Prokaryotic dksA/traR C4-type zinc finger TM2_27250 PF03073 TspO/MBR family TM2_27260 PF09515 Thiamine transporter protein (Thia_YuaJ) TM2_27280 PF00583 Acetyltransferase (GNAT) family TM2_27290 PF06803 Protein of unknown function (DUF1232) TM2_27300 PF01098 Cell cycle protein TM2_27310 PF01098 Cell cycle protein TM2_27320 PF15975 Flotillin TM2_27320 PF01145 SPFH domain / Band 7 family TM2_27340 PF12867 DinB superfamily TM2_27350 PF00465 Iron-containing alcohol dehydrogenase TM2_27360 PF00171 Aldehyde dehydrogenase family TM2_27390 PF01510 N-acetylmuramoyl-L-alanine amidase TM2_27390 PF01471 Putative peptidoglycan binding domain TM2_27400 PF04688 SPP1 phage holin TM2_27410 PF10960 BhlA holin family TM2_27460 PF09693 Phage uncharacterised protein (Phage_XkdX) TM2_27470 PF09636 XkdW protein TM2_27500 PF10076 Uncharacterised protein conserved in bacteria (DUF2313) TM2_27510 PF04865 Baseplate J-like protein TM2_27520 PF10934 Protein of unknown function (DUF2634) TM2_27530 PF10844 Protein of unknown function (DUF2577) TM2_27550 PF01476 LysM domain TM2_27560 PF01464 Transglycosylase SLT domain TM2_27560 PF01464 Transglycosylase SLT domain TM2_27580 PF08890 Phage XkdN-like tail assembly chaperone protein, TAC TM2_27590 PF09393 Phage tail tube protein TM2_27600 PF17482 Phage tail sheath C-terminal domain TM2_27600 PF17481 Phage tail sheath protein beta-sandwich domain TM2_27600 PF04984 Phage tail sheath protein subtilisin-like domain TM2_27630 PF04883 Bacteriophage HK97-gp10, putative tail-component TM2_27640 PF12206 Domain of unknown function (DUF3599) TM2_27650 PF11436 Protein of unknown function (DUF3199) TM2_27660 PF05065 Phage capsid family TM2_27670 PF14550 Putative phage serine protease XkdF TM2_27680 PF04860 Phage portal protein TM2_27690 PF04466 Phage terminase large subunit TM2_27690 PF17288 Terminase RNAseH like domain TM2_27700 PF10668 Phage terminase small subunit TM2_27710 PF08281 Sigma-70, region 4 TM2_27720 PF17356 Phage-like element PBSX protein XtrA TM2_27730 PF05866 Endodeoxyribonuclease RusA TM2_27770 PF01381 Helix-turn-helix TM2_27800 PF06968 Biotin and Thiamin Synthesis associated domain TM2_27800 PF04055 Radical SAM superfamily TM2_27820 PF02673 Bacitracin resistance protein BacA TM2_27830 PF01594 AI-2E family transporter TM2_27850 PF02894 Oxidoreductase family, C-terminal alpha/beta domain TM2_27850 PF01408 Oxidoreductase family, NAD-binding Rossmann fold TM2_27860 PF01965 DJ-1/PfpI family TM2_27870 PF02743 Cache domain TM2_27870 PF00672 HAMP domain TM2_27870 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain TM2_27880 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain TM2_27880 PF02743 Cache domain TM2_27880 PF00672 HAMP domain TM2_27890 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain TM2_27890 PF02743 Cache domain TM2_27890 PF00672 HAMP domain TM2_27900 PF02743 Cache domain TM2_27900 PF00672 HAMP domain TM2_27900 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain TM2_27930 PF03060 Nitronate monooxygenase TM2_27940 PF01894 Uncharacterised protein family UPF0047 TM2_27950 PF00571 CBS domain TM2_27950 PF01595 Cyclin M transmembrane N-terminal domain TM2_27950 PF03471 Transporter associated domain TM2_27960 PF04298 Putative neutral zinc metallopeptidase TM2_27980 PF07885 Ion channel TM2_27980 PF02254 TrkA-N domain TM2_27990 PF08868 YugN-like family TM2_28010 PF00342 Phosphoglucose isomerase TM2_28020 PF00465 Iron-containing alcohol dehydrogenase TM2_28030 PF00465 Iron-containing alcohol dehydrogenase TM2_28040 PF04070 Domain of unknown function (DUF378) TM2_28050 PF00575 S1 RNA binding domain TM2_28060 PF00155 Aminotransferase class I and II TM2_28070 PF01037 Lrp/AsnC ligand binding domain TM2_28080 PF00561 alpha/beta hydrolase fold TM2_28080 PF08386 TAP-like protein TM2_28090 PF08958 Domain of unknown function (DUF1871) TM2_28100 PF00155 Aminotransferase class I and II TM2_28110 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase TM2_28110 PF00512 His Kinase A (phospho-acceptor) domain TM2_28130 PF08810 Kinase associated protein B TM2_28140 PF00929 Exonuclease TM2_28150 PF07690 Major Facilitator Superfamily TM2_28160 PF00905 Penicillin binding protein transpeptidase domain TM2_28160 PF00912 Transglycosylase TM2_28170 PF04134 Protein of unknown function, DUF393 TM2_28180 PF17328 Family of unknown function (DUF5366) TM2_28190 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase TM2_28190 PF17203 Single cache domain 3 TM2_28190 PF14689 Sensor_kinase_SpoOB-type, alpha-helical domain TM2_28190 PF00989 PAS fold TM2_28200 PF00072 Response regulator receiver domain TM2_28210 PF02608 ABC transporter substrate-binding protein PnrA-like TM2_28220 PF00005 ABC transporter TM2_28230 PF02653 Branched-chain amino acid transport system / permease component TM2_28240 PF02653 Branched-chain amino acid transport system / permease component TM2_28250 PF03390 2-hydroxycarboxylate transporter family TM2_28270 PF00361 Proton-conducting membrane transporter TM2_28270 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus TM2_28270 PF13244 Domain of unknown function (DUF4040) TM2_28280 PF04039 Domain related to MnhB subunit of Na+/H+ antiporter TM2_28290 PF00420 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L TM2_28300 PF00361 Proton-conducting membrane transporter TM2_28310 PF01899 Na+/H+ ion antiporter subunit TM2_28320 PF04066 Multiple resistance and pH regulation protein F (MrpF / PhaF) TM2_28330 PF03334 Na+/H+ antiporter subunit TM2_28340 PF03061 Thioesterase superfamily TM2_28350 PF00196 Bacterial regulatory proteins, luxR family TM2_28350 PF00072 Response regulator receiver domain TM2_28360 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase TM2_28360 PF07730 Histidine kinase TM2_28380 PF00348 Polyprenyl synthetase TM2_28390 PF08181 DegQ (SacQ) family TM2_28410 PF00563 EAL domain TM2_28410 PF08668 HDOD domain TM2_28420 PF04095 Nicotinate phosphoribosyltransferase (NAPRTase) family TM2_28420 PF17956 Nicotinate phosphoribosyltransferase C-terminal domain TM2_28420 PF17767 Nicotinate phosphoribosyltransferase (NAPRTase) N-terminal domain TM2_28430 PF00857 Isochorismatase family TM2_28440 PF07997 Protein of unknown function (DUF1694) TM2_28450 PF14166 YueH-like protein TM2_28460 PF10676 Spore germination protein gerPA/gerPF TM2_28470 PF10676 Spore germination protein gerPA/gerPF TM2_28480 PF01594 AI-2E family transporter TM2_28490 PF10842 Protein of unknown function (DUF2642) TM2_28510 PF01966 HD domain TM2_28520 PF00106 short chain dehydrogenase TM2_28530 PF17355 Family of unknown function (DUF5383) TM2_28550 PF12538 DNA transporter TM2_28550 PF01580 FtsK/SpoIIIE family TM2_28560 PF10140 WXG100 protein secretion system (Wss), protein YukC TM2_28570 PF08817 WXG100 protein secretion system (Wss), protein YukD TM2_28580 PF06013 Proteins of 100 residues with WXG TM2_28590 PF17853 GGDEF-like domain TM2_28590 PF13556 PucR C-terminal helix-turn-helix domain TM2_28590 PF06018 CodY GAF-like domain TM2_28600 PF05222 Alanine dehydrogenase/PNT, N-terminal domain TM2_28600 PF01262 Alanine dehydrogenase/PNT, C-terminal domain TM2_28610 PF02632 BioY family TM2_28620 PF03553 Na+/H+ antiporter family TM2_28620 PF13726 Na+-H+ antiporter family TM2_28630 PF02789 Cytosol aminopeptidase family, N-terminal domain TM2_28630 PF00883 Cytosol aminopeptidase family, catalytic domain TM2_28650 PF02681 Divergent PAP2 family TM2_28660 PF06725 3D domain TM2_28670 PF14068 Putative membrane protein TM2_28680 PF17302 Family of unknown function (DUF5351) TM2_28690 PF07992 Pyridine nucleotide-disulphide oxidoreductase TM2_28700 PF07992 Pyridine nucleotide-disulphide oxidoreductase TM2_28730 PF01521 Iron-sulphur cluster biosynthesis TM2_28740 PF01678 Diaminopimelate epimerase TM2_28750 PF07293 Protein of unknown function (DUF1450) TM2_28760 PF07992 Pyridine nucleotide-disulphide oxidoreductase TM2_28780 PF07315 Protein of unknown function (DUF1462) TM2_28790 PF01106 NifU-like domain TM2_28800 PF00326 Prolyl oligopeptidase family TM2_28800 PF07676 WD40-like Beta Propeller Repeat TM2_28810 PF00288 GHMP kinases N terminal domain TM2_28810 PF08544 GHMP kinases C terminal TM2_28820 PF00291 Pyridoxal-phosphate dependent enzyme TM2_28830 PF00742 Homoserine dehydrogenase TM2_28830 PF03447 Homoserine dehydrogenase, NAD binding domain TM2_28830 PF01842 ACT domain TM2_28840 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain TM2_28840 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain TM2_28860 PF04608 Phosphatidylglycerophosphatase A TM2_28870 PF13344 Haloacid dehalogenase-like hydrolase TM2_28880 PF01934 Protein of unknown function DUF86 TM2_28890 PF06265 Protein of unknown function (DUF1027) TM2_28900 PF09580 Sporulation lipoprotein YhcN/YlaJ (Spore_YhcN_YlaJ) TM2_28910 PF04055 Radical SAM superfamily TM2_28910 PF16881 N-terminal domain of lipoyl synthase of Radical_SAM family TM2_28920 PF01551 Peptidase family M23 TM2_28940 PF10903 Protein of unknown function (DUF2691) TM2_28950 PF09560 Sporulation protein YunB (Spo_YunB) TM2_28960 PF08827 Domain of unknown function (DUF1805) TM2_28970 PF02872 5'-nucleotidase, C-terminal domain TM2_28980 PF01904 Protein of unknown function DUF72 TM2_28990 PF17853 GGDEF-like domain TM2_28990 PF13556 PucR C-terminal helix-turn-helix domain TM2_28990 PF07905 Purine catabolism regulatory protein-like family TM2_29000 PF00190 Cupin TM2_29010 PF07690 Major Facilitator Superfamily TM2_29020 PF00266 Aminotransferase class-V TM2_29030 PF04231 Endonuclease I TM2_29050 PF01032 FecCD transport family TM2_29060 PF01032 FecCD transport family TM2_29070 PF01497 Periplasmic binding protein TM2_29090 PF07859 alpha/beta hydrolase fold TM2_29100 PF06146 Phosphate-starvation-inducible E TM2_29110 PF00512 His Kinase A (phospho-acceptor) domain TM2_29120 PF00486 Transcriptional regulatory protein, C terminal TM2_29120 PF00072 Response regulator receiver domain TM2_29130 PF04235 Protein of unknown function (DUF418) TM2_29150 PF02525 Flavodoxin-like fold TM2_29160 PF01370 NAD dependent epimerase/dehydratase family TM2_29160 PF08338 Domain of unknown function (DUF1731) TM2_29170 PF18665 Tetracyclin repressor-like, C-terminal domain TM2_29170 PF00440 Bacterial regulatory proteins, tetR family TM2_29190 PF13021 Domain of unknown function (DUF3885) TM2_29210 PF01458 Uncharacterized protein family (UPF0051) TM2_29220 PF01592 NifU-like N terminal domain TM2_29230 PF00266 Aminotransferase class-V TM2_29240 PF01458 Uncharacterized protein family (UPF0051) TM2_29250 PF00005 ABC transporter TM2_29270 PF02627 Carboxymuconolactone decarboxylase family TM2_29280 PF03180 NLPA lipoprotein TM2_29290 PF00528 Binding-protein-dependent transport system inner membrane component TM2_29300 PF00005 ABC transporter TM2_29300 PF09383 NIL domain TM2_29310 PF02036 SCP-2 sterol transfer family TM2_29320 PF00085 Thioredoxin TM2_29330 PF01751 Toprim domain TM2_29340 PF10830 Protein of unknown function (DUF2553) TM2_29350 PF01597 Glycine cleavage H-protein TM2_29360 PF03960 ArsC family TM2_29370 PF00441 Acyl-CoA dehydrogenase, C-terminal domain TM2_29370 PF02770 Acyl-CoA dehydrogenase, middle domain TM2_29370 PF02771 Acyl-CoA dehydrogenase, N-terminal domain TM2_29380 PF00108 Thiolase, N-terminal domain TM2_29380 PF02803 Thiolase, C-terminal domain TM2_29390 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain TM2_29390 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain TM2_29390 PF00378 Enoyl-CoA hydratase/isomerase TM2_29400 PF14115 YuzL-like protein TM2_29420 PF07875 Coat F domain TM2_29430 PF10835 Protein of unknown function (DUF2573) TM2_29440 PF00005 ABC transporter TM2_29460 PF00106 short chain dehydrogenase TM2_29470 PF13180 PDZ domain TM2_29480 PF00072 Response regulator receiver domain TM2_29480 PF00486 Transcriptional regulatory protein, C terminal TM2_29490 PF00512 His Kinase A (phospho-acceptor) domain TM2_29490 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase TM2_29490 PF00672 HAMP domain TM2_29510 PF00440 Bacterial regulatory proteins, tetR family TM2_29520 PF10415 Fumarase C C-terminus TM2_29520 PF00206 Lyase TM2_29530 PF13113 Protein of unknown function (DUF3970) TM2_29540 PF03323 Bacillus/Clostridium GerA spore germination protein TM2_29550 PF03845 Spore germination protein TM2_29560 PF05504 Spore germination B3/ GerAC like, C-terminal TM2_29580 PF00196 Bacterial regulatory proteins, luxR family TM2_29580 PF00072 Response regulator receiver domain TM2_29590 PF00672 HAMP domain TM2_29590 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase TM2_29590 PF07730 Histidine kinase TM2_29600 PF09922 Cell wall-active antibiotics response 4TMS YvqF TM2_29620 PF04012 PspA/IM30 family TM2_29640 PF01923 Cobalamin adenosyltransferase TM2_29660 PF04166 Pyridoxal phosphate biosynthetic protein PdxA TM2_29670 PF07005 Sugar-binding N-terminal domain TM2_29670 PF17042 Nucleotide-binding C-terminal domain TM2_29680 PF01590 GAF domain TM2_29680 PF00158 Sigma-54 interaction domain TM2_29710 PF00465 Iron-containing alcohol dehydrogenase TM2_29720 PF00701 Dihydrodipicolinate synthetase family TM2_29730 PF00005 ABC transporter TM2_29740 PF01032 FecCD transport family TM2_29750 PF01497 Periplasmic binding protein TM2_29760 PF00295 Glycosyl hydrolases family 28 TM2_29770 PF04295 D-galactarate dehydratase / Altronate hydrolase, C terminus TM2_29770 PF08666 SAF domain TM2_29780 PF08125 Mannitol dehydrogenase C-terminal domain TM2_29780 PF01232 Mannitol dehydrogenase Rossmann domain TM2_29790 PF00356 Bacterial regulatory proteins, lacI family TM2_29800 PF02614 Glucuronate isomerase TM2_29810 PF00512 His Kinase A (phospho-acceptor) domain TM2_29810 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase TM2_29820 PF00486 Transcriptional regulatory protein, C terminal TM2_29820 PF00072 Response regulator receiver domain TM2_29830 PF00005 ABC transporter TM2_29840 PF01032 FecCD transport family TM2_29850 PF01032 FecCD transport family TM2_29860 PF01497 Periplasmic binding protein TM2_29870 PF13520 Amino acid permease TM2_29880 PF09575 Small spore protein J (Spore_SspJ) TM2_29900 PF04307 LexA-binding, inner membrane-associated putative hydrolase TM2_29910 PF00884 Sulfatase TM2_29930 PF00528 Binding-protein-dependent transport system inner membrane component TM2_29940 PF00248 Aldo/keto reductase family TM2_29950 PF00480 ROK family TM2_29960 PF00999 Sodium/hydrogen exchanger family TM2_29970 PF03458 UPF0126 domain TM2_29980 PF02600 Disulfide bond formation protein DsbB TM2_29990 PF13462 Thioredoxin TM2_30000 PF00403 Heavy-metal-associated domain TM2_30010 PF00005 ABC transporter TM2_30020 PF00950 ABC 3 transport family TM2_30030 PF01297 Zinc-uptake complex component A periplasmic TM2_30050 PF13977 BetI-type transcriptional repressor, C-terminal TM2_30050 PF00440 Bacterial regulatory proteins, tetR family TM2_30060 PF08664 YcbB domain TM2_30060 PF00072 Response regulator receiver domain TM2_30070 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase TM2_30080 PF00206 Lyase TM2_30080 PF10415 Fumarase C C-terminus TM2_30090 PF00375 Sodium:dicarboxylate symporter family TM2_30110 PF00403 Heavy-metal-associated domain TM2_30120 PF00403 Heavy-metal-associated domain TM2_30130 PF02583 Metal-sensitive transcriptional repressor TM2_30150 PF00990 Diguanylate cyclase, GGDEF domain TM2_30150 PF00072 Response regulator receiver domain TM2_30190 PF01668 SmpB protein TM2_30200 PF00773 RNB domain TM2_30200 PF00575 S1 RNA binding domain TM2_30200 PF17876 Cold shock domain TM2_30200 PF08206 Ribonuclease B OB domain TM2_30210 PF12146 Serine aminopeptidase, S33 TM2_30220 PF03840 Preprotein translocase SecG subunit TM2_30230 PF18277 AbrB C-terminal domain TM2_30230 PF04014 Antidote-toxin recognition MazE, bacterial antitoxin TM2_30240 PF01381 Helix-turn-helix TM2_30280 PF01638 HxlR-like helix-turn-helix TM2_30290 PF00528 Binding-protein-dependent transport system inner membrane component TM2_30300 PF04069 Substrate binding domain of ABC-type glycine betaine transport system TM2_30310 PF00528 Binding-protein-dependent transport system inner membrane component TM2_30320 PF00005 ABC transporter TM2_30320 PF00571 CBS domain TM2_30330 PF12802 MarR family TM2_30340 PF01914 MarC family integral membrane protein TM2_30360 PF00583 Acetyltransferase (GNAT) family TM2_30400 PF00005 ABC transporter TM2_30420 PF00113 Enolase, C-terminal TIM barrel domain TM2_30420 PF03952 Enolase, N-terminal domain TM2_30430 PF06415 BPG-independent PGAM N-terminus (iPGM_N) TM2_30430 PF01676 Metalloenzyme superfamily TM2_30440 PF00121 Triosephosphate isomerase TM2_30450 PF00162 Phosphoglycerate kinase TM2_30460 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain TM2_30460 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain TM2_30470 PF04198 Putative sugar-binding domain TM2_30480 PF00324 Amino acid permease TM2_30490 PF00202 Aminotransferase class-III TM2_30500 PF13426 PAS domain TM2_30500 PF00158 Sigma-54 interaction domain TM2_30500 PF02954 Bacterial regulatory protein, Fis family TM2_30510 PF07729 FCD domain TM2_30510 PF00392 Bacterial regulatory proteins, gntR family TM2_30520 PF00309 Sigma-54 factor, Activator interacting domain (AID) TM2_30520 PF04963 Sigma-54 factor, core binding domain TM2_30520 PF04552 Sigma-54, DNA binding domain TM2_30530 PF09628 YvfG protein TM2_30540 PF01554 MatE TM2_30550 PF00005 ABC transporter TM2_30550 PF08352 Oligopeptide/dipeptide transporter, C-terminal region TM2_30560 PF08352 Oligopeptide/dipeptide transporter, C-terminal region TM2_30560 PF00005 ABC transporter TM2_30570 PF00528 Binding-protein-dependent transport system inner membrane component TM2_30580 PF00528 Binding-protein-dependent transport system inner membrane component TM2_30590 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle TM2_30600 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family TM2_30610 PF00132 Bacterial transferase hexapeptide (six repeats) TM2_30610 PF17836 PglD N-terminal domain TM2_30620 PF02397 Bacterial sugar transferase TM2_30630 PF14667 Polysaccharide biosynthesis C-terminal domain TM2_30630 PF01943 Polysaccharide biosynthesis protein TM2_30640 PF04230 Polysaccharide pyruvyl transferase TM2_30650 PF00535 Glycosyl transferase family 2 TM2_30670 PF13439 Glycosyltransferase Family 4 TM2_30670 PF00534 Glycosyl transferases group 1 TM2_30680 PF00535 Glycosyl transferase family 2 TM2_30690 PF13439 Glycosyltransferase Family 4 TM2_30690 PF00534 Glycosyl transferases group 1 TM2_30700 PF02719 Polysaccharide biosynthesis protein TM2_30710 PF13614 AAA domain TM2_30720 PF02706 Chain length determinant protein TM2_30730 PF08671 Anti-repressor SinI TM2_30730 PF01381 Helix-turn-helix TM2_30750 PF01497 Periplasmic binding protein TM2_30760 PF01032 FecCD transport family TM2_30770 PF01032 FecCD transport family TM2_30790 PF11738 Protein of unknown function (DUF3298) TM2_30790 PF13739 Deacetylase PdaC TM2_30790 PF01522 Polysaccharide deacetylase TM2_30800 PF00005 ABC transporter TM2_30800 PF12848 ABC transporter TM2_30810 PF00005 ABC transporter TM2_30810 PF08352 Oligopeptide/dipeptide transporter, C-terminal region TM2_30820 PF00005 ABC transporter TM2_30830 PF00528 Binding-protein-dependent transport system inner membrane component TM2_30830 PF12911 N-terminal TM domain of oligopeptide transport permease C TM2_30840 PF00528 Binding-protein-dependent transport system inner membrane component TM2_30850 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle TM2_30860 PF00201 UDP-glucoronosyl and UDP-glucosyl transferase TM2_30890 PF00574 Clp protease TM2_30900 PF03641 Possible lysine decarboxylase TM2_30910 PF03819 MazG nucleotide pyrophosphohydrolase domain TM2_30920 PF01740 STAS domain TM2_30920 PF00916 Sulfate permease family TM2_30930 PF00484 Carbonic anhydrase TM2_30940 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain TM2_30940 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain TM2_30950 PF00545 ribonuclease TM2_30960 PF00797 N-acetyltransferase TM2_30970 PF00381 PTS HPr component phosphorylation site TM2_30980 PF10298 WhiA N-terminal LAGLIDADG-like domain TM2_30980 PF02650 WhiA C-terminal HTH domain TM2_30980 PF14527 WhiA LAGLIDADG-like domain TM2_30990 PF01933 Uncharacterised protein family UPF0052 TM2_31000 PF03668 P-loop ATPase protein family TM2_31010 PF00293 NUDIX domain TM2_31020 PF07992 Pyridine nucleotide-disulphide oxidoreductase TM2_31030 PF00877 NlpC/P60 family TM2_31060 PF01502 Phosphoribosyl-AMP cyclohydrolase TM2_31060 PF01503 Phosphoribosyl-ATP pyrophosphohydrolase TM2_31070 PF00977 Histidine biosynthesis protein TM2_31080 PF00977 Histidine biosynthesis protein TM2_31090 PF00117 Glutamine amidotransferase class-I TM2_31100 PF00475 Imidazoleglycerol-phosphate dehydratase TM2_31110 PF00815 Histidinol dehydrogenase TM2_31120 PF01634 ATP phosphoribosyltransferase TM2_31130 PF13393 Histidyl-tRNA synthetase TM2_31140 PF13529 Peptidase_C39 like family TM2_31150 PF13460 NAD(P)H-binding TM2_31160 PF02082 Transcriptional regulator TM2_31170 PF14602 Hexapeptide repeat of succinyl-transferase TM2_31180 PF13419 Haloacid dehalogenase-like hydrolase TM2_31190 PF07670 Nucleoside recognition TM2_31200 PF01790 Prolipoprotein diacylglyceryl transferase TM2_31210 PF07475 HPr Serine kinase C-terminal domain TM2_31210 PF02603 HPr Serine kinase N terminus TM2_31220 PF01979 Amidohydrolase family TM2_31230 PF01182 Glucosamine-6-phosphate isomerases/6-phosphogluconolactonase TM2_31240 PF00392 Bacterial regulatory proteins, gntR family TM2_31240 PF07702 UTRA domain TM2_31250 PF00149 Calcineurin-like phosphoesterase TM2_31260 PF04020 Mycobacterial 4 TMS phage holin, superfamily IV TM2_31270 PF04024 PspC domain TM2_31280 PF13349 Putative adhesin TM2_31310 PF17755 UvrA DNA-binding domain TM2_31310 PF00005 ABC transporter TM2_31310 PF17760 UvrA interaction domain TM2_31320 PF00271 Helicase conserved C-terminal domain TM2_31320 PF04851 Type III restriction enzyme, res subunit TM2_31320 PF02151 UvrB/uvrC motif TM2_31320 PF12344 Ultra-violet resistance protein B TM2_31320 PF17757 UvrB interaction domain TM2_31330 PF09964 Uncharacterized protein conserved in bacteria (DUF2198) TM2_31340 PF01326 Pyruvate phosphate dikinase, PEP/pyruvate binding domain TM2_31340 PF00391 PEP-utilising enzyme, mobile domain TM2_31350 PF00440 Bacterial regulatory proteins, tetR family TM2_31360 PF07690 Major Facilitator Superfamily TM2_31380 PF00072 Response regulator receiver domain TM2_31380 PF00486 Transcriptional regulatory protein, C terminal TM2_31390 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase TM2_31390 PF00989 PAS fold TM2_31390 PF00512 His Kinase A (phospho-acceptor) domain TM2_31390 PF18698 Histidine kinase sensor domain TM2_31390 PF00672 HAMP domain TM2_31400 PF13231 Dolichyl-phosphate-mannose-protein mannosyltransferase TM2_31410 PF00535 Glycosyl transferase family 2 TM2_31420 PF00324 Amino acid permease TM2_31430 PF00881 Nitroreductase family TM2_31440 PF01638 HxlR-like helix-turn-helix TM2_31450 PF17820 PDZ domain TM2_31460 PF17423 Swarming motility protein TM2_31470 PF01471 Putative peptidoglycan binding domain TM2_31470 PF03572 Peptidase family S41 TM2_31470 PF17820 PDZ domain TM2_31480 PF01925 Sulfite exporter TauE/SafE TM2_31490 PF00877 NlpC/P60 family TM2_31500 PF18075 FtsX extracellular domain TM2_31500 PF02687 FtsX-like permease family TM2_31510 PF00005 ABC transporter TM2_31520 PF13442 Cytochrome C oxidase, cbb3-type, subunit III TM2_31530 PF02588 Uncharacterised 5xTM membrane BCR, YitT family COG1284 TM2_31530 PF10035 Uncharacterized protein conserved in bacteria (DUF2179) TM2_31560 PF03462 PCRF domain TM2_31560 PF00472 RF-1 domain TM2_31570 PF07516 SecA Wing and Scaffold domain TM2_31570 PF07517 SecA DEAD-like domain TM2_31570 PF02810 SEC-C motif TM2_31570 PF01043 SecA preprotein cross-linking domain TM2_31580 PF16321 Sigma 54 modulation/S30EA ribosomal protein C terminus TM2_31580 PF02482 Sigma 54 modulation protein / S30EA ribosomal protein TM2_31590 PF00672 HAMP domain TM2_31590 PF02743 Cache domain TM2_31590 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain TM2_31620 PF02561 Flagellar protein FliS TM2_31630 PF02465 Flagellar hook-associated protein 2 N-terminus TM2_31630 PF07195 Flagellar hook-associated protein 2 C-terminus TM2_31630 PF07196 Flagellin hook IN motif TM2_31640 PF03646 FlaG protein TM2_31650 PF02599 Global regulator protein family TM2_31660 PF02623 FliW protein TM2_31680 PF00700 Bacterial flagellin C-terminal helical region TM2_31680 PF00669 Bacterial flagellin N-terminal helical region TM2_31690 PF00460 Flagella basal body rod protein TM2_31690 PF06429 Flagellar basal body rod FlgEFG protein C-terminal TM2_31700 PF05130 FlgN protein TM2_31740 PF10719 Late competence development protein ComFB TM2_31750 PF00271 Helicase conserved C-terminal domain TM2_31750 PF04851 Type III restriction enzyme, res subunit TM2_31760 PF02645 Uncharacterised protein, DegV family COG1307 TM2_31770 PF00072 Response regulator receiver domain TM2_31770 PF00196 Bacterial regulatory proteins, luxR family TM2_31780 PF05384 Sensor protein DegS TM2_31780 PF07730 Histidine kinase TM2_31780 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase TM2_31790 PF09186 Domain of unknown function (DUF1949) TM2_31790 PF01205 Uncharacterized protein family UPF0029 TM2_31800 PF03816 Cell envelope-related transcriptional attenuator domain TM2_31810 PF00953 Glycosyl transferase family 4 TM2_31830 PF00535 Glycosyl transferase family 2 TM2_31840 PF02706 Chain length determinant protein TM2_31850 PF04932 O-Antigen ligase TM2_31860 PF16363 GDP-mannose 4,6 dehydratase TM2_31870 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain TM2_31870 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain TM2_31870 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain TM2_31880 PF13439 Glycosyltransferase Family 4 TM2_31880 PF00534 Glycosyl transferases group 1 TM2_31890 PF14667 Polysaccharide biosynthesis C-terminal domain TM2_31890 PF01943 Polysaccharide biosynthesis protein TM2_31900 PF02397 Bacterial sugar transferase TM2_31920 PF01520 N-acetylmuramoyl-L-alanine amidase TM2_31920 PF04122 Putative cell wall binding repeat 2 TM2_31930 PF01520 N-acetylmuramoyl-L-alanine amidase TM2_31930 PF04122 Putative cell wall binding repeat 2 TM2_31940 PF04122 Putative cell wall binding repeat 2 TM2_31940 PF08486 Stage II sporulation protein TM2_31960 PF03816 Cell envelope-related transcriptional attenuator domain TM2_31970 PF02350 UDP-N-acetylglucosamine 2-epimerase TM2_31980 PF00483 Nucleotidyl transferase TM2_31990 PF00005 ABC transporter TM2_32000 PF01061 ABC-2 type transporter TM2_32020 PF04464 CDP-Glycerol:Poly(glycerophosphate) glycerophosphotransferase TM2_32040 PF01467 Cytidylyltransferase-like TM2_32050 PF03808 Glycosyl transferase WecB/TagA/CpsF family TM2_32060 PF04464 CDP-Glycerol:Poly(glycerophosphate) glycerophosphotransferase TM2_32070 PF08239 Bacterial SH3 domain TM2_32070 PF05036 Sporulation related domain TM2_32070 PF01832 Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase TM2_32080 PF01238 Phosphomannose isomerase type I TM2_32090 PF00528 Binding-protein-dependent transport system inner membrane component TM2_32100 PF00528 Binding-protein-dependent transport system inner membrane component TM2_32110 PF01547 Bacterial extracellular solute-binding protein TM2_32120 PF00196 Bacterial regulatory proteins, luxR family TM2_32120 PF00072 Response regulator receiver domain TM2_32130 PF02743 Cache domain TM2_32130 PF00672 HAMP domain TM2_32130 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase TM2_32130 PF06580 Histidine kinase TM2_32150 PF00583 Acetyltransferase (GNAT) family TM2_32160 PF01081 KDPG and KHG aldolase TM2_32170 PF00294 pfkB family carbohydrate kinase TM2_32180 PF00356 Bacterial regulatory proteins, lacI family TM2_32190 PF04962 KduI/IolB family TM2_32210 PF03323 Bacillus/Clostridium GerA spore germination protein TM2_32220 PF03845 Spore germination protein TM2_32230 PF05504 Spore germination B3/ GerAC like, C-terminal TM2_32240 PF00534 Glycosyl transferases group 1 TM2_32240 PF00535 Glycosyl transferase family 2 TM2_32250 PF00083 Sugar (and other) transporter TM2_32260 PF03816 Cell envelope-related transcriptional attenuator domain TM2_32280 PF00877 NlpC/P60 family TM2_32300 PF09587 Bacterial capsule synthesis protein PGA_cap TM2_32310 PF14102 Capsule biosynthesis CapC TM2_32320 PF08245 Mur ligase middle domain TM2_32330 PF03323 Bacillus/Clostridium GerA spore germination protein TM2_32350 PF05504 Spore germination B3/ GerAC like, C-terminal TM2_32360 PF00356 Bacterial regulatory proteins, lacI family TM2_32370 PF00294 pfkB family carbohydrate kinase TM2_32380 PF05025 RbsD / FucU transport protein family TM2_32390 PF00005 ABC transporter TM2_32400 PF02653 Branched-chain amino acid transport system / permease component TM2_32410 PF13407 Periplasmic binding protein domain TM2_32420 PF01613 Flavin reductase like domain TM2_32430 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family TM2_32430 PF03466 LysR substrate binding domain TM2_32440 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain TM2_32440 PF00205 Thiamine pyrophosphate enzyme, central domain TM2_32440 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain TM2_32450 PF03306 Alpha-acetolactate decarboxylase TM2_32460 PF01037 Lrp/AsnC ligand binding domain TM2_32460 PF13404 AsnC-type helix-turn-helix domain TM2_32470 PF02417 Chromate transporter TM2_32480 PF02417 Chromate transporter TM2_32490 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain TM2_32490 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain TM2_32490 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain TM2_32510 PF04434 SWIM zinc finger TM2_32520 PF00176 SNF2 family N-terminal domain TM2_32520 PF12419 SNF2 Helicase protein TM2_32520 PF00271 Helicase conserved C-terminal domain TM2_32530 PF13426 PAS domain TM2_32530 PF01740 STAS domain TM2_32560 PF14183 YwpF-like protein TM2_32570 PF01741 Large-conductance mechanosensitive channel, MscL TM2_32580 PF07977 FabA-like domain TM2_32590 PF18801 response regulator aspartate phosphatase H, N terminal TM2_32600 PF00460 Flagella basal body rod protein TM2_32600 PF06429 Flagellar basal body rod FlgEFG protein C-terminal TM2_32610 PF06429 Flagellar basal body rod FlgEFG protein C-terminal TM2_32610 PF00460 Flagella basal body rod protein TM2_32630 PF12116 Stage III sporulation protein D TM2_32650 PF01047 MarR family TM2_32660 PF07690 Major Facilitator Superfamily TM2_32670 PF01569 PAP2 superfamily TM2_32680 PF07690 Major Facilitator Superfamily TM2_32690 PF00497 Bacterial extracellular solute-binding proteins, family 3 TM2_32700 PF00528 Binding-protein-dependent transport system inner membrane component TM2_32710 PF00005 ABC transporter TM2_32720 PF00909 Ammonium Transporter Family TM2_32730 PF00543 Nitrogen regulatory protein P-II TM2_32740 PF01551 Peptidase family M23 TM2_32750 PF00583 Acetyltransferase (GNAT) family TM2_32780 PF00005 ABC transporter TM2_32830 PF00471 Ribosomal protein L33 TM2_32840 PF02492 CobW/HypB/UreG, nucleotide-binding domain TM2_32840 PF07683 Cobalamin synthesis protein cobW C-terminal domain TM2_32850 PF00253 Ribosomal protein S14p/S29e TM2_32860 PF04055 Radical SAM superfamily TM2_32860 PF06463 Molybdenum Cofactor Synthesis C TM2_32870 PF02634 FdhD/NarQ family TM2_32880 PF07690 Major Facilitator Superfamily TM2_32890 PF00384 Molybdopterin oxidoreductase TM2_32890 PF18364 Molybdopterin oxidoreductase N-terminal domain TM2_32890 PF01568 Molydopterin dinucleotide binding domain TM2_32900 PF00092 von Willebrand factor type A domain TM2_32910 PF00092 von Willebrand factor type A domain TM2_32920 PF08486 Stage II sporulation protein TM2_32930 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) TM2_32940 PF08680 TATA-box binding TM2_32950 PF06612 Protein of unknown function (DUF1146) TM2_32970 PF00401 ATP synthase, Delta/Epsilon chain, long alpha-helix domain TM2_32970 PF02823 ATP synthase, Delta/Epsilon chain, beta-sandwich domain TM2_32980 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain TM2_32980 PF02874 ATP synthase alpha/beta family, beta-barrel domain TM2_32990 PF00231 ATP synthase TM2_33000 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain TM2_33000 PF00306 ATP synthase alpha/beta chain, C terminal domain TM2_33000 PF02874 ATP synthase alpha/beta family, beta-barrel domain TM2_33010 PF00213 ATP synthase delta (OSCP) subunit TM2_33020 PF00430 ATP synthase B/B' CF(0) TM2_33030 PF00137 ATP synthase subunit C TM2_33040 PF00119 ATP synthase A chain TM2_33050 PF03899 ATP synthase I chain TM2_33070 PF00464 Serine hydroxymethyltransferase TM2_33080 PF04260 Protein of unknown function (DUF436) TM2_33090 PF02502 Ribose/Galactose Isomerase TM2_33100 PF01451 Low molecular weight phosphotyrosine protein phosphatase TM2_33110 PF02659 Putative manganese efflux pump TM2_33120 PF03481 Putative GTP-binding controlling metal-binding TM2_33120 PF01300 Telomere recombination TM2_33140 PF09551 Stage II sporulation protein R (spore_II_R) TM2_33160 PF17827 PrmC N-terminal domain TM2_33160 PF05175 Methyltransferase small domain TM2_33170 PF00472 RF-1 domain TM2_33170 PF03462 PCRF domain TM2_33180 PF13411 MerR HTH family regulatory protein TM2_33190 PF03547 Membrane transport protein TM2_33200 PF00390 Malic enzyme, N-terminal domain TM2_33200 PF03949 Malic enzyme, NAD binding domain TM2_33210 PF00265 Thymidine kinase TM2_33220 PF01197 Ribosomal protein L31 TM2_33230 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain TM2_33230 PF07498 Rho termination factor, N-terminal domain TM2_33230 PF07497 Rho termination factor, RNA-binding domain TM2_33240 PF03320 Bacterial fructose-1,6-bisphosphatase, glpX-encoded TM2_33250 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) TM2_33260 PF00923 Transaldolase/Fructose-6-phosphate aldolase TM2_33270 PF01116 Fructose-bisphosphate aldolase class-II TM2_33280 PF00072 Response regulator receiver domain TM2_33290 PF10740 Domain of unknown function (DUF2529) TM2_33300 PF06418 CTP synthase N-terminus TM2_33300 PF00117 Glutamine amidotransferase class-I TM2_33310 PF05066 HB1, ASXL, restriction endonuclease HTH domain TM2_33340 PF00441 Acyl-CoA dehydrogenase, C-terminal domain TM2_33340 PF02770 Acyl-CoA dehydrogenase, middle domain TM2_33340 PF02771 Acyl-CoA dehydrogenase, N-terminal domain TM2_33350 PF02771 Acyl-CoA dehydrogenase, N-terminal domain TM2_33350 PF00441 Acyl-CoA dehydrogenase, C-terminal domain TM2_33350 PF02770 Acyl-CoA dehydrogenase, middle domain TM2_33360 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain TM2_33360 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain TM2_33370 PF02803 Thiolase, C-terminal domain TM2_33370 PF00108 Thiolase, N-terminal domain TM2_33380 PF02754 Cysteine-rich domain TM2_33380 PF13183 4Fe-4S dicluster domain TM2_33390 PF13091 PLD-like domain TM2_33400 PF03851 UV-endonuclease UvdE TM2_33420 PF17676 LD-carboxypeptidase C-terminal domain TM2_33420 PF02016 LD-carboxypeptidase N-terminal domain TM2_33440 PF00005 ABC transporter TM2_33440 PF00664 ABC transporter transmembrane region TM2_33450 PF13396 Phospholipase_D-nuclease N-terminal TM2_33450 PF13091 PLD-like domain TM2_33460 PF17676 LD-carboxypeptidase C-terminal domain TM2_33460 PF02016 LD-carboxypeptidase N-terminal domain TM2_33470 PF03485 Arginyl tRNA synthetase N terminal domain TM2_33470 PF05746 DALR anticodon binding domain TM2_33470 PF00750 tRNA synthetases class I (R) TM2_33480 PF09148 Domain of unknown function (DUF1934) TM2_33500 PF00491 Arginase family TM2_33510 PF17284 Spermidine synthase tetramerisation domain TM2_33520 PF00912 Transglycosylase TM2_33520 PF00905 Penicillin binding protein transpeptidase domain TM2_33530 PF08741 YwhD family TM2_33540 PF02163 Peptidase family M50 TM2_33550 PF01361 Tautomerase enzyme TM2_33570 PF00296 Luciferase-like monooxygenase TM2_33580 PF03466 LysR substrate binding domain TM2_33580 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family TM2_33590 PF03358 NADPH-dependent FMN reductase TM2_33600 PF00296 Luciferase-like monooxygenase TM2_33610 PF00462 Glutaredoxin TM2_33620 PF00583 Acetyltransferase (GNAT) family TM2_33630 PF00528 Binding-protein-dependent transport system inner membrane component TM2_33650 PF00528 Binding-protein-dependent transport system inner membrane component TM2_33660 PF00005 ABC transporter TM2_33680 PF01966 HD domain TM2_33690 PF07293 Protein of unknown function (DUF1450) TM2_33720 PF00535 Glycosyl transferase family 2 TM2_33720 PF07238 PilZ domain TM2_33740 PF03099 Biotin/lipoate A/B protein ligase family TM2_33770 PF04740 LXG domain of WXG superfamily TM2_33770 PF14449 Pre-toxin TG TM2_33830 PF03737 Aldolase/RraA TM2_33850 PF01515 Phosphate acetyl/butaryl transferase TM2_33860 PF06778 Chlorite dismutase TM2_33870 PF07690 Major Facilitator Superfamily TM2_33880 PF01037 Lrp/AsnC ligand binding domain TM2_33890 PF07690 Major Facilitator Superfamily TM2_33910 PF07883 Cupin domain TM2_33940 PF00155 Aminotransferase class I and II TM2_33960 PF00908 dTDP-4-dehydrorhamnose 3,5-epimerase TM2_33970 PF04321 RmlD substrate binding domain TM2_33980 PF16363 GDP-mannose 4,6 dehydratase TM2_33990 PF00483 Nucleotidyl transferase TM2_34000 PF04101 Glycosyltransferase family 28 C-terminal domain TM2_34010 PF02348 Cytidylyltransferase TM2_34020 PF08666 SAF domain TM2_34020 PF03102 NeuB family TM2_34030 PF00583 Acetyltransferase (GNAT) family TM2_34040 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family TM2_34050 PF04464 CDP-Glycerol:Poly(glycerophosphate) glycerophosphotransferase TM2_34060 PF00535 Glycosyl transferase family 2 TM2_34080 PF09671 Spore coat protein (Spore_GerQ) TM2_34100 PF04241 Protein of unknown function (DUF423) TM2_34110 PF00860 Permease family TM2_34120 PF17261 Family of unknown function (DUF5327) TM2_34130 PF00171 Aldehyde dehydrogenase family TM2_34140 PF03167 Uracil DNA glycosylase superfamily TM2_34150 PF00535 Glycosyl transferase family 2 TM2_34170 PF08543 Phosphomethylpyrimidine kinase TM2_34200 PF08244 Glycosyl hydrolases family 32 C terminal TM2_34200 PF00251 Glycosyl hydrolases family 32 N-terminal domain TM2_34210 PF00367 phosphotransferase system, EIIB TM2_34210 PF02378 Phosphotransferase system, EIIC TM2_34220 PF03123 CAT RNA binding domain TM2_34220 PF00874 PRD domain TM2_34240 PF13860 FlgD Ig-like domain TM2_34240 PF05922 Peptidase inhibitor I9 TM2_34240 PF02225 PA domain TM2_34240 PF00082 Subtilase family TM2_34250 PF00296 Luciferase-like monooxygenase TM2_34260 PF00881 Nitroreductase family TM2_34270 PF01098 Cell cycle protein TM2_34280 PF17368 Spore morphogenesis and germination YwcE TM2_34290 PF03626 Prokaryotic Cytochrome C oxidase subunit IV TM2_34300 PF00510 Cytochrome c oxidase subunit III TM2_34310 PF00115 Cytochrome C and Quinol oxidase polypeptide I TM2_34320 PF00116 Cytochrome C oxidase subunit II, periplasmic domain TM2_34320 PF02790 Cytochrome C oxidase subunit II, transmembrane domain TM2_34340 PF02744 Galactose-1-phosphate uridyl transferase, C-terminal domain TM2_34340 PF01087 Galactose-1-phosphate uridyl transferase, N-terminal domain TM2_34350 PF16363 GDP-mannose 4,6 dehydratase TM2_34360 PF10509 Galactokinase galactose-binding signature TM2_34360 PF08544 GHMP kinases C terminal TM2_34360 PF00288 GHMP kinases N terminal domain TM2_34390 PF04138 GtrA-like protein TM2_34430 PF04341 Protein of unknown function, DUF485 TM2_34440 PF00474 Sodium:solute symporter family TM2_34490 PF02581 Thiamine monophosphate synthase TM2_34500 PF02110 Hydroxyethylthiazole kinase family TM2_34510 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family TM2_34510 PF03466 LysR substrate binding domain TM2_34520 PF03788 LrgA family TM2_34530 PF04172 LrgB-like family TM2_34540 PF10672 S-adenosylmethionine-dependent methyltransferase TM2_34540 PF17785 PUA-like domain TM2_34550 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily TM2_34560 PF00005 ABC transporter TM2_34570 PF00528 Binding-protein-dependent transport system inner membrane component TM2_34580 PF00497 Bacterial extracellular solute-binding proteins, family 3 TM2_34590 PF18801 response regulator aspartate phosphatase H, N terminal TM2_34610 PF04607 Region found in RelA / SpoT proteins TM2_34620 PF02653 Branched-chain amino acid transport system / permease component TM2_34630 PF00005 ABC transporter TM2_34640 PF13407 Periplasmic binding protein domain TM2_34650 PF13229 Right handed beta helix region TM2_34660 PF01063 Amino-transferase class IV TM2_34690 PF11975 Family 4 glycosyl hydrolase C-terminal domain TM2_34690 PF02056 Family 4 glycosyl hydrolase TM2_34700 PF02255 PTS system, Lactose/Cellobiose specific IIA subunit TM2_34710 PF02378 Phosphotransferase system, EIIC TM2_34720 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit TM2_34730 PF08279 HTH domain TM2_34730 PF00874 PRD domain TM2_34730 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 TM2_34730 PF05043 Mga helix-turn-helix domain TM2_34760 PF00208 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase TM2_34760 PF02812 Glu/Leu/Phe/Val dehydrogenase, dimerisation domain TM2_34790 PF04542 Sigma-70 region 2 TM2_34790 PF08281 Sigma-70, region 4 TM2_34800 PF00544 Pectate lyase TM2_34810 PF00664 ABC transporter transmembrane region TM2_34810 PF00005 ABC transporter TM2_34820 PF00664 ABC transporter transmembrane region TM2_34820 PF00005 ABC transporter TM2_34830 PF02322 Cytochrome bd terminal oxidase subunit II TM2_34840 PF01654 Cytochrome bd terminal oxidase subunit I TM2_34850 PF00005 ABC transporter TM2_34860 PF01032 FecCD transport family TM2_34870 PF01497 Periplasmic binding protein TM2_34880 PF04203 Sortase domain TM2_34890 PF00005 ABC transporter TM2_34900 PF01032 FecCD transport family TM2_34910 PF01497 Periplasmic binding protein TM2_34930 PF05031 Iron Transport-associated domain TM2_34940 PF05031 Iron Transport-associated domain TM2_34950 PF01638 HxlR-like helix-turn-helix TM2_34960 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily TM2_34970 PF00925 GTP cyclohydrolase II TM2_34970 PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase TM2_34980 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region TM2_34980 PF01872 RibD C-terminal domain TM2_35000 PF01522 Polysaccharide deacetylase TM2_35010 PF02255 PTS system, Lactose/Cellobiose specific IIA subunit TM2_35020 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit TM2_35030 PF00232 Glycosyl hydrolase family 1 TM2_35040 PF03786 D-mannonate dehydratase (UxuA) TM2_35050 PF02378 Phosphotransferase system, EIIC TM2_35060 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 TM2_35060 PF00874 PRD domain TM2_35060 PF05043 Mga helix-turn-helix domain TM2_35060 PF08279 HTH domain TM2_35110 PF03553 Na+/H+ antiporter family TM2_35120 PF00206 Lyase TM2_35120 PF10415 Fumarase C C-terminus TM2_35130 PF00710 Asparaginase, N-terminal TM2_35130 PF17763 Glutaminase/Asparaginase C-terminal domain TM2_35140 PF01381 Helix-turn-helix TM2_35160 PF17353 Family of unknown function (DUF5381) TM2_35190 PF06013 Proteins of 100 residues with WXG TM2_35200 PF07687 Peptidase dimerisation domain TM2_35200 PF01546 Peptidase family M20/M25/M40 TM2_35230 PF01418 Helix-turn-helix domain, rpiR family TM2_35230 PF01380 SIS domain TM2_35240 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase TM2_35240 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase TM2_35260 PF02447 GntP family permease TM2_35270 PF01717 Cobalamin-independent synthase, Catalytic domain TM2_35290 PF00005 ABC transporter TM2_35300 PF00232 Glycosyl hydrolase family 1 TM2_35310 PF02378 Phosphotransferase system, EIIC TM2_35310 PF00367 phosphotransferase system, EIIB TM2_35310 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 TM2_35320 PF00874 PRD domain TM2_35320 PF03123 CAT RNA binding domain TM2_35340 PF09234 Domain of unknown function (DUF1963) TM2_35360 PF02361 Cobalt transport protein TM2_35370 PF00005 ABC transporter TM2_35380 PF09819 ABC-type cobalt transport system, permease component TM2_35390 PF03070 TENA/THI-4/PQQC family TM2_35450 PF00801 PKD domain TM2_35450 PF05547 Immune inhibitor A peptidase M6 TM2_35460 PF03992 Antibiotic biosynthesis monooxygenase TM2_35470 PF00881 Nitroreductase family TM2_35480 PF01047 MarR family TM2_35490 PF07831 Pyrimidine nucleoside phosphorylase C-terminal domain TM2_35490 PF00591 Glycosyl transferase family, a/b domain TM2_35490 PF02885 Glycosyl transferase family, helical bundle domain TM2_35500 PF01773 Na+ dependent nucleoside transporter N-terminus TM2_35500 PF07662 Na+ dependent nucleoside transporter C-terminus TM2_35510 PF01791 DeoC/LacD family aldolase TM2_35520 PF04198 Putative sugar-binding domain TM2_35540 PF01757 Acyltransferase family TM2_35550 PF07690 Major Facilitator Superfamily TM2_35560 PF01488 Shikimate / quinate 5-dehydrogenase TM2_35560 PF05201 Glutamyl-tRNAGlu reductase, N-terminal domain TM2_35560 PF00745 Glutamyl-tRNAGlu reductase, dimerisation domain TM2_35570 PF13649 Methyltransferase domain TM2_35580 PF00072 Response regulator receiver domain TM2_35580 PF00196 Bacterial regulatory proteins, luxR family TM2_35600 PF13411 MerR HTH family regulatory protein TM2_35610 PF01408 Oxidoreductase family, NAD-binding Rossmann fold TM2_35620 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain TM2_35630 PF00324 Amino acid permease TM2_35640 PF08713 DNA alkylation repair enzyme TM2_35650 PF02447 GntP family permease TM2_35660 PF02782 FGGY family of carbohydrate kinases, C-terminal domain TM2_35660 PF00370 FGGY family of carbohydrate kinases, N-terminal domain TM2_35670 PF01380 SIS domain TM2_35670 PF01418 Helix-turn-helix domain, rpiR family TM2_35680 PF01156 Inosine-uridine preferring nucleoside hydrolase TM2_35750 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family TM2_35750 PF03466 LysR substrate binding domain TM2_35760 PF00356 Bacterial regulatory proteins, lacI family TM2_35770 PF13416 Bacterial extracellular solute-binding protein TM2_35780 PF00528 Binding-protein-dependent transport system inner membrane component TM2_35790 PF00528 Binding-protein-dependent transport system inner membrane component TM2_35800 PF07745 Glycosyl hydrolase family 53 TM2_35810 PF02449 Beta-galactosidase TM2_35810 PF08533 Beta-galactosidase C-terminal domain TM2_35810 PF08532 Beta-galactosidase trimerisation domain TM2_35820 PF03600 Citrate transporter TM2_35840 PF12679 ABC-2 family transporter protein TM2_35850 PF00005 ABC transporter TM2_35860 PF08274 PhnA Zinc-Ribbon TM2_35860 PF03831 PhnA domain TM2_35870 PF02595 Glycerate kinase family TM2_35880 PF02447 GntP family permease TM2_35890 PF05651 Putative sugar diacid recognition TM2_35890 PF17853 GGDEF-like domain TM2_35890 PF13556 PucR C-terminal helix-turn-helix domain TM2_35900 PF00440 Bacterial regulatory proteins, tetR family TM2_35900 PF17922 Tetracyclin repressor-like, C-terminal domain TM2_35910 PF07690 Major Facilitator Superfamily TM2_35930 PF00005 ABC transporter TM2_35950 PF18801 response regulator aspartate phosphatase H, N terminal TM2_35960 PF03123 CAT RNA binding domain TM2_35960 PF00874 PRD domain TM2_35970 PF00232 Glycosyl hydrolase family 1 TM2_35980 PF02378 Phosphotransferase system, EIIC TM2_35980 PF00367 phosphotransferase system, EIIB TM2_35980 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 TM2_36030 PF00293 NUDIX domain TM2_36060 PF00324 Amino acid permease TM2_36070 PF00356 Bacterial regulatory proteins, lacI family TM2_36080 PF07690 Major Facilitator Superfamily TM2_36090 PF18317 Shikimate 5'-dehydrogenase C-terminal domain TM2_36090 PF08501 Shikimate dehydrogenase substrate binding domain TM2_36100 PF07690 Major Facilitator Superfamily TM2_36160 PF14449 Pre-toxin TG TM2_36160 PF04740 LXG domain of WXG superfamily TM2_36160 PF14410 HNH/ENDO VII superfamily nuclease with conserved GHE residues TM2_36190 PF00232 Glycosyl hydrolase family 1 TM2_36200 PF00367 phosphotransferase system, EIIB TM2_36200 PF02378 Phosphotransferase system, EIIC TM2_36200 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 TM2_36210 PF00392 Bacterial regulatory proteins, gntR family TM2_36210 PF07702 UTRA domain TM2_36240 PF02567 Phenazine biosynthesis-like protein TM2_36250 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family TM2_36250 PF03466 LysR substrate binding domain TM2_36290 PF13545 Crp-like helix-turn-helix domain TM2_36290 PF00027 Cyclic nucleotide-binding domain TM2_36320 PF00753 Metallo-beta-lactamase superfamily TM2_36320 PF16123 Hydroxyacylglutathione hydrolase C-terminus TM2_36340 PF13361 UvrD-like helicase C-terminal domain TM2_36340 PF00580 UvrD/REP helicase N-terminal domain TM2_36380 PF02590 Predicted SPOUT methyltransferase TM2_36390 PF14116 YyzF-like protein TM2_36400 PF02361 Cobalt transport protein TM2_36410 PF12558 ATP-binding cassette cobalt transporter TM2_36410 PF00005 ABC transporter TM2_36420 PF07155 ECF-type riboflavin transporter, S component TM2_36450 PF00005 ABC transporter TM2_36460 PF00583 Acetyltransferase (GNAT) family TM2_36470 PF13180 PDZ domain TM2_36480 PF00753 Metallo-beta-lactamase superfamily TM2_36490 PF09648 YycH protein TM2_36500 PF07435 YycH protein TM2_36510 PF13426 PAS domain TM2_36510 PF00512 His Kinase A (phospho-acceptor) domain TM2_36510 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase TM2_36510 PF00672 HAMP domain TM2_36520 PF00486 Transcriptional regulatory protein, C terminal TM2_36520 PF00072 Response regulator receiver domain TM2_36530 PF00578 AhpC/TSA family TM2_36550 PF04235 Protein of unknown function (DUF418) TM2_36560 PF00709 Adenylosuccinate synthetase TM2_36570 PF00440 Bacterial regulatory proteins, tetR family TM2_36580 PF00067 Cytochrome P450 TM2_36590 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily TM2_36600 PF00772 DnaB-like helicase N terminal domain TM2_36600 PF03796 DnaB-like helicase C terminal domain TM2_36610 PF16226 Domain of unknown function (DUF4885) TM2_36630 PF00756 Putative esterase TM2_36640 PF01497 Periplasmic binding protein TM2_36640 PF12833 Helix-turn-helix domain TM2_36650 PF01497 Periplasmic binding protein TM2_36660 PF00756 Putative esterase TM2_36670 PF14174 YycC-like protein TM2_36680 PF07690 Major Facilitator Superfamily TM2_36690 PF03948 Ribosomal protein L9, C-terminal domain TM2_36690 PF01281 Ribosomal protein L9, N-terminal domain TM2_36700 PF01368 DHH family TM2_36700 PF02272 DHHA1 domain TM2_36710 PF09991 Predicted membrane protein (DUF2232) TM2_36720 PF01368 DHH family TM2_36720 PF02833 DHHA2 domain TM2_36730 PF13739 Deacetylase PdaC TM2_36730 PF11738 Protein of unknown function (DUF3298) TM2_36740 PF04542 Sigma-70 region 2 TM2_36740 PF08281 Sigma-70, region 4 TM2_36760 PF06628 Catalase-related immune-responsive TM2_36760 PF00199 Catalase TM2_36770 PF03358 NADPH-dependent FMN reductase TM2_36780 PF01738 Dienelactone hydrolase family TM2_36790 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily TM2_36800 PF00528 Binding-protein-dependent transport system inner membrane component TM2_36810 PF00005 ABC transporter TM2_36810 PF00571 CBS domain TM2_36820 PF01084 Ribosomal protein S18 TM2_36830 PF00436 Single-strand binding protein family TM2_36840 PF01250 Ribosomal protein S6 TM2_36850 PF01926 50S ribosome-binding GTPase TM2_36850 PF06071 Protein of unknown function (DUF933) TM2_36860 PF06107 Bacterial protein of unknown function (DUF951) TM2_36900 PF06866 Protein of unknown function (DUF1256) TM2_36910 PF17762 HTH domain found in ParB protein TM2_36910 PF02195 ParB-like nuclease domain TM2_36920 PF13614 AAA domain TM2_36940 PF17762 HTH domain found in ParB protein TM2_36940 PF02195 ParB-like nuclease domain TM2_36950 PF02527 rRNA small subunit methyltransferase G TM2_36960 PF13932 GidA associated domain TM2_36960 PF01134 Glucose inhibited division protein A TM2_36970 PF01926 50S ribosome-binding GTPase TM2_36970 PF12631 MnmE helical domain TM2_36970 PF10396 GTP-binding protein TrmE N-terminus TM2_36980 PF14804 Jag N-terminus TM2_36980 PF01424 R3H domain TM2_36990 PF02096 60Kd inner membrane protein TM2_37000 PF00825 Ribonuclease P TM2_37010 PF00468 Ribosomal protein L34 TM2_37020 PF13152 Protein of unknown function (DUF3967) TM2_37020 PF13411 MerR HTH family regulatory protein TM2_37030 PF12671 Putative amidase domain TM2_37050 PF01446 Replication protein TM2_37060 PF09504 Bsp6I restriction endonuclease TM2_37070 PF00145 C-5 cytosine-specific DNA methylase