locus-tag class description VT48_00005 PF00308 Bacterial dnaA protein VT48_00005 PF08299 Bacterial dnaA protein helix-turn-helix VT48_00005 PF11638 DnaA N-terminal domain VT48_00010 PF00712 DNA polymerase III beta subunit, N-terminal domain VT48_00010 PF02767 DNA polymerase III beta subunit, central domain VT48_00010 PF02768 DNA polymerase III beta subunit, C-terminal domain VT48_00020 PF02463 RecF/RecN/SMC N terminal domain VT48_00025 PF04025 Domain of unknown function (DUF370) VT48_00030 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase VT48_00030 PF00204 DNA gyrase B VT48_00030 PF00986 DNA gyrase B subunit, carboxyl terminus VT48_00030 PF01751 Toprim domain VT48_00035 PF03989 DNA gyrase C-terminal domain, beta-propeller VT48_00035 PF00521 DNA gyrase/topoisomerase IV, subunit A VT48_00055 PF10764 Inhibitor of sigma-G Gin VT48_00060 PF10112 5-bromo-4-chloroindolyl phosphate hydrolysis protein VT48_00065 PF05816 Toxic anion resistance protein (TelA) VT48_00070 PF01276 Orn/Lys/Arg decarboxylase, major domain VT48_00070 PF03711 Orn/Lys/Arg decarboxylase, C-terminal domain VT48_00075 PF02223 Thymidylate kinase VT48_00080 PF06153 Cyclic-di-AMP receptor VT48_00085 PF03885 Protein of unknown function (DUF327) VT48_00090 PF09115 DNA polymerase III, delta subunit, C terminal VT48_00095 PF04468 PSP1 C-terminal conserved region VT48_00100 PF06156 Initiation control protein YabA VT48_00105 PF05175 Methyltransferase small domain VT48_00110 PF01541 GIY-YIG catalytic domain VT48_00115 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases VT48_00120 PF18277 AbrB C-terminal domain VT48_00120 PF04014 Antidote-toxin recognition MazE, bacterial antitoxin VT48_00125 PF01588 Putative tRNA binding domain VT48_00125 PF08264 Anticodon-binding domain of tRNA VT48_00125 PF09334 tRNA synthetases class I (M) VT48_00130 PF01026 TatD related DNase VT48_00135 PF06725 3D domain VT48_00135 PF03990 G5-linked-Ubiquitin-like domain VT48_00135 PF07501 G5 domain VT48_00140 PF13662 Toprim domain VT48_00140 PF13331 Domain of unknown function (DUF4093) VT48_00145 PF00398 Ribosomal RNA adenine dimethylase VT48_00150 PF05582 YabG peptidase U57 VT48_00155 PF06257 Biofilm formation stimulator VEG VT48_00160 PF00269 Small, acid-soluble spore proteins, alpha/beta type VT48_00165 PF08544 GHMP kinases C terminal VT48_00165 PF00288 GHMP kinases N terminal domain VT48_00170 PF09182 Bacterial purine repressor, N-terminal VT48_00170 PF00156 Phosphoribosyl transferase domain VT48_00175 PF01042 Endoribonuclease L-PSP VT48_00180 PF04026 SpoVG VT48_00185 PF00132 Bacterial transferase hexapeptide (six repeats) VT48_00185 PF00483 Nucleotidyl transferase VT48_00190 PF14572 Phosphoribosyl synthetase-associated domain VT48_00190 PF13793 N-terminal domain of ribose phosphate pyrophosphokinase VT48_00195 PF14693 Ribosomal protein TL5, C-terminal domain VT48_00195 PF01386 Ribosomal L25p family VT48_00200 PF01195 Peptidyl-tRNA hydrolase VT48_00205 PF10955 Protein of unknown function (DUF2757) VT48_00210 PF03461 TRCF domain VT48_00210 PF17757 UvrB interaction domain VT48_00210 PF00270 DEAD/DEAH box helicase VT48_00210 PF02559 CarD-like/TRCF domain VT48_00210 PF00271 Helicase conserved C-terminal domain VT48_00215 PF15714 Stage V sporulation protein T C-terminal, transcription factor VT48_00215 PF04014 Antidote-toxin recognition MazE, bacterial antitoxin VT48_00220 PF01943 Polysaccharide biosynthesis protein VT48_00220 PF14667 Polysaccharide biosynthesis C-terminal domain VT48_00225 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases VT48_00225 PF03819 MazG nucleotide pyrophosphohydrolase domain VT48_00230 PF01479 S4 domain VT48_00235 PF07873 YabP family VT48_00240 PF09578 Spore cortex protein YabQ (Spore_YabQ) VT48_00245 PF04977 Septum formation initiator VT48_00250 PF00575 S1 RNA binding domain VT48_00265 PF07228 Stage II sporulation protein E (SpoIIE) VT48_00270 PF00092 von Willebrand factor type A domain VT48_00275 PF00069 Protein kinase domain VT48_00280 PF11734 TilS substrate C-terminal domain VT48_00280 PF09179 TilS substrate binding domain VT48_00280 PF01171 PP-loop family VT48_00290 PF00004 ATPase family associated with various cellular activities (AAA) VT48_00290 PF06480 FtsH Extracellular VT48_00290 PF01434 Peptidase family M41 VT48_00290 PF17862 AAA+ lid domain VT48_00295 PF03309 Type III pantothenate kinase VT48_00300 PF01430 Hsp33 protein VT48_00305 PF13145 PPIC-type PPIASE domain VT48_00310 PF00291 Pyridoxal-phosphate dependent enzyme VT48_00315 PF04715 Anthranilate synthase component I, N terminal region VT48_00315 PF00425 chorismate binding enzyme VT48_00320 PF00117 Glutamine amidotransferase class-I VT48_00325 PF01063 Amino-transferase class IV VT48_00330 PF00809 Pterin binding enzyme VT48_00335 PF02152 Dihydroneopterin aldolase VT48_00340 PF01288 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK) VT48_00345 PF01381 Helix-turn-helix VT48_00350 PF01207 Dihydrouridine synthase (Dus) VT48_00355 PF00152 tRNA synthetases class II (D, K and N) VT48_00355 PF01336 OB-fold nucleic acid binding domain VT48_00375 PF05848 CtsR N-terminal HTH domain VT48_00375 PF17727 CtsR C-terminal dimerization domain VT48_00380 PF02151 UvrB/uvrC motif VT48_00385 PF00217 ATP:guanido phosphotransferase, C-terminal catalytic domain VT48_00390 PF17871 AAA lid domain VT48_00390 PF10431 C-terminal, D2-small domain, of ClpB protein VT48_00390 PF02861 Clp amino terminal domain, pathogenicity island component VT48_00390 PF07724 AAA domain (Cdc48 subfamily) VT48_00390 PF00004 ATPase family associated with various cellular activities (AAA) VT48_00395 PF18073 Rubredoxin metal binding domain VT48_00400 PF02457 DisA bacterial checkpoint controller nucleotide-binding VT48_00400 PF10635 DisA bacterial checkpoint controller linker region VT48_00410 PF01128 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase VT48_00415 PF02542 YgbB family VT48_00420 PF00749 tRNA synthetases class I (E and Q), catalytic domain VT48_00425 PF00132 Bacterial transferase hexapeptide (six repeats) VT48_00425 PF06426 Serine acetyltransferase, N-terminal VT48_00430 PF01406 tRNA synthetases class I (C) catalytic domain VT48_00430 PF09190 DALR domain VT48_00435 PF00636 Ribonuclease III domain VT48_00440 PF08032 RNA 2'-O ribose methyltransferase substrate binding VT48_00440 PF00588 SpoU rRNA Methylase family VT48_00445 PF05991 YacP-like NYN domain VT48_00450 PF04542 Sigma-70 region 2 VT48_00450 PF08281 Sigma-70, region 4 VT48_00455 PF00584 SecE/Sec61-gamma subunits of protein translocation complex VT48_00460 PF00467 KOW motif VT48_00460 PF02357 Transcription termination factor nusG VT48_00465 PF00298 Ribosomal protein L11, RNA binding domain VT48_00465 PF03946 Ribosomal protein L11, N-terminal domain VT48_00470 PF00687 Ribosomal protein L1p/L10e family VT48_00475 PF00466 Ribosomal protein L10 VT48_00480 PF00542 Ribosomal protein L7/L12 C-terminal domain VT48_00480 PF16320 Ribosomal protein L7/L12 dimerisation domain VT48_00485 PF05175 Methyltransferase small domain VT48_00490 PF04565 RNA polymerase Rpb2, domain 3 VT48_00490 PF00562 RNA polymerase Rpb2, domain 6 VT48_00490 PF04560 RNA polymerase Rpb2, domain 7 VT48_00490 PF04561 RNA polymerase Rpb2, domain 2 VT48_00490 PF10385 RNA polymerase beta subunit external 1 domain VT48_00490 PF04563 RNA polymerase beta subunit VT48_00495 PF04998 RNA polymerase Rpb1, domain 5 VT48_00495 PF05000 RNA polymerase Rpb1, domain 4 VT48_00495 PF04983 RNA polymerase Rpb1, domain 3 VT48_00495 PF00623 RNA polymerase Rpb1, domain 2 VT48_00495 PF04997 RNA polymerase Rpb1, domain 1 VT48_00500 PF01248 Ribosomal protein L7Ae/L30e/S12e/Gadd45 family VT48_00505 PF00164 Ribosomal protein S12/S23 VT48_00510 PF00177 Ribosomal protein S7p/S5e VT48_00515 PF00679 Elongation factor G C-terminus VT48_00515 PF14492 Elongation Factor G, domain II VT48_00515 PF03764 Elongation factor G, domain IV VT48_00515 PF03144 Elongation factor Tu domain 2 VT48_00515 PF00009 Elongation factor Tu GTP binding domain VT48_00520 PF03143 Elongation factor Tu C-terminal domain VT48_00520 PF00009 Elongation factor Tu GTP binding domain VT48_00520 PF03144 Elongation factor Tu domain 2 VT48_00525 PF12146 Serine aminopeptidase, S33 VT48_00530 PF00338 Ribosomal protein S10p/S20e VT48_00535 PF00297 Ribosomal protein L3 VT48_00540 PF00573 Ribosomal protein L4/L1 family VT48_00545 PF00276 Ribosomal protein L23 VT48_00550 PF00181 Ribosomal Proteins L2, RNA binding domain VT48_00550 PF03947 Ribosomal Proteins L2, C-terminal domain VT48_00555 PF00203 Ribosomal protein S19 VT48_00560 PF00237 Ribosomal protein L22p/L17e VT48_00565 PF00189 Ribosomal protein S3, C-terminal domain VT48_00565 PF07650 KH domain VT48_00570 PF00252 Ribosomal protein L16p/L10e VT48_00575 PF00831 Ribosomal L29 protein VT48_00580 PF00366 Ribosomal protein S17 VT48_00585 PF00238 Ribosomal protein L14p/L23e VT48_00590 PF17136 Ribosomal proteins 50S L24/mitochondrial 39S L24 VT48_00590 PF00467 KOW motif VT48_00595 PF00281 Ribosomal protein L5 VT48_00595 PF00673 ribosomal L5P family C-terminus VT48_00600 PF00253 Ribosomal protein S14p/S29e VT48_00605 PF00410 Ribosomal protein S8 VT48_00610 PF00347 Ribosomal protein L6 VT48_00615 PF00861 Ribosomal L18 of archaea, bacteria, mitoch. and chloroplast VT48_00620 PF03719 Ribosomal protein S5, C-terminal domain VT48_00620 PF00333 Ribosomal protein S5, N-terminal domain VT48_00625 PF00327 Ribosomal protein L30p/L7e VT48_00630 PF00828 Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27A VT48_00635 PF00344 SecY translocase VT48_00640 PF05191 Adenylate kinase, active site lid VT48_00645 PF00557 Metallopeptidase family M24 VT48_00650 PF01176 Translation initiation factor 1A / IF-1 VT48_00655 PF00444 Ribosomal protein L36 VT48_00660 PF00416 Ribosomal protein S13/S18 VT48_00665 PF00411 Ribosomal protein S11 VT48_00670 PF03118 Bacterial RNA polymerase, alpha chain C terminal domain VT48_00670 PF01000 RNA polymerase Rpb3/RpoA insert domain VT48_00670 PF01193 RNA polymerase Rpb3/Rpb11 dimerisation domain VT48_00675 PF01196 Ribosomal protein L17 VT48_00680 PF00005 ABC transporter VT48_00685 PF00005 ABC transporter VT48_00690 PF02361 Cobalt transport protein VT48_00695 PF01416 tRNA pseudouridine synthase VT48_00700 PF00572 Ribosomal protein L13 VT48_00705 PF00380 Ribosomal protein S9/S16 VT48_00725 PF13302 Acetyltransferase (GNAT) domain VT48_00750 PF10730 Protein of unknown function (DUF2521) VT48_00755 PF01520 N-acetylmuramoyl-L-alanine amidase VT48_00760 PF10609 NUBPL iron-transfer P-loop NTPase VT48_00765 PF17898 Spore germination GerD central core domain VT48_00770 PF14089 KinB-signalling pathway activation in sporulation VT48_00775 PF01522 Polysaccharide deacetylase VT48_00805 PF00669 Bacterial flagellin N-terminal helical region VT48_00805 PF00700 Bacterial flagellin C-terminal helical region VT48_00810 PF01740 STAS domain VT48_00810 PF00916 Sulfate permease family VT48_00815 PF01758 Sodium Bile acid symporter family VT48_00820 PF07075 Protein of unknown function (DUF1343) VT48_00825 PF01915 Glycosyl hydrolase family 3 C-terminal domain VT48_00825 PF00933 Glycosyl hydrolase family 3 N terminal domain VT48_00830 PF00144 Beta-lactamase VT48_00835 PF02378 Phosphotransferase system, EIIC VT48_00835 PF00367 phosphotransferase system, EIIB VT48_00840 PF01380 SIS domain VT48_00840 PF01418 Helix-turn-helix domain, rpiR family VT48_00845 PF13580 SIS domain VT48_00875 PF00491 Arginase family VT48_00880 PF08281 Sigma-70, region 4 VT48_00880 PF04542 Sigma-70 region 2 VT48_00885 PF13490 Putative zinc-finger VT48_00890 PF02457 DisA bacterial checkpoint controller nucleotide-binding VT48_00895 PF07949 YbbR-like protein VT48_00900 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I VT48_00900 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III VT48_00900 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain VT48_00900 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II VT48_00905 PF01380 SIS domain VT48_00920 PF13732 Domain of unknown function (DUF4162) VT48_00920 PF00005 ABC transporter VT48_00930 PF12704 MacB-like periplasmic core domain VT48_00930 PF02687 FtsX-like permease family VT48_00930 PF00005 ABC transporter VT48_00935 PF00005 ABC transporter VT48_00935 PF12704 MacB-like periplasmic core domain VT48_00935 PF02687 FtsX-like permease family VT48_00940 PF10400 Virulence activator alpha C-term VT48_00940 PF03551 Transcriptional regulator PadR-like family VT48_00950 PF00005 ABC transporter VT48_00965 PF13905 Thioredoxin-like VT48_00985 PF00005 ABC transporter VT48_01030 PF04235 Protein of unknown function (DUF418) VT48_01040 PF00005 ABC transporter VT48_01050 PF01381 Helix-turn-helix VT48_01060 PF00561 alpha/beta hydrolase fold VT48_01065 PF12833 Helix-turn-helix domain VT48_01070 PF17922 Tetracyclin repressor-like, C-terminal domain VT48_01070 PF00440 Bacterial regulatory proteins, tetR family VT48_01085 PF00324 Amino acid permease VT48_01090 PF03009 Glycerophosphoryl diester phosphodiesterase family VT48_01095 PF07690 Major Facilitator Superfamily VT48_01105 PF03190 Protein of unknown function, DUF255 VT48_01110 PF02801 Beta-ketoacyl synthase, C-terminal domain VT48_01110 PF00109 Beta-ketoacyl synthase, N-terminal domain VT48_01140 PF02583 Metal-sensitive transcriptional repressor VT48_01145 PF13686 DsrE/DsrF/DrsH-like family VT48_01155 PF01206 Sulfurtransferase TusA VT48_01155 PF00581 Rhodanese-like domain VT48_01160 PF00753 Metallo-beta-lactamase superfamily VT48_01160 PF00581 Rhodanese-like domain VT48_01165 PF01206 Sulfurtransferase TusA VT48_01170 PF01925 Sulfite exporter TauE/SafE VT48_01175 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) VT48_01175 PF03129 Anticodon binding domain VT48_01175 PF09180 Prolyl-tRNA synthetase, C-terminal VT48_01180 PF07690 Major Facilitator Superfamily VT48_01195 PF01047 MarR family VT48_01205 PF04463 Protein of unknown function (DUF523) VT48_01215 PF00248 Aldo/keto reductase family VT48_01220 PF00465 Iron-containing alcohol dehydrogenase VT48_01230 PF13520 Amino acid permease VT48_01240 PF00874 PRD domain VT48_01240 PF03123 CAT RNA binding domain VT48_01245 PF02378 Phosphotransferase system, EIIC VT48_01245 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 VT48_01245 PF00367 phosphotransferase system, EIIB VT48_01250 PF00232 Glycosyl hydrolase family 1 VT48_01265 PF00874 PRD domain VT48_01265 PF05043 Mga helix-turn-helix domain VT48_01265 PF08279 HTH domain VT48_01265 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 VT48_01270 PF00480 ROK family VT48_01275 PF01074 Glycosyl hydrolases family 38 N-terminal domain VT48_01275 PF07748 Glycosyl hydrolases family 38 C-terminal domain VT48_01275 PF09261 Alpha mannosidase middle domain VT48_01285 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit VT48_01290 PF00381 PTS HPr component phosphorylation site VT48_01290 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 VT48_01295 PF17936 Bacterial Ig domain VT48_01295 PF00082 Subtilase family VT48_01310 PF00324 Amino acid permease VT48_01315 PF02574 Homocysteine S-methyltransferase VT48_01320 PF10035 Uncharacterized protein conserved in bacteria (DUF2179) VT48_01320 PF02588 Uncharacterised 5xTM membrane BCR, YitT family COG1284 VT48_01335 PF07690 Major Facilitator Superfamily VT48_01355 PF00082 Subtilase family VT48_01360 PF01425 Amidase VT48_01365 PF00440 Bacterial regulatory proteins, tetR family VT48_01370 PF07883 Cupin domain VT48_01375 PF00107 Zinc-binding dehydrogenase VT48_01375 PF13823 Alcohol dehydrogenase GroES-associated VT48_01375 PF08240 Alcohol dehydrogenase GroES-like domain VT48_01380 PF01047 MarR family VT48_01385 PF00501 AMP-binding enzyme VT48_01385 PF13193 AMP-binding enzyme C-terminal domain VT48_01390 PF13520 Amino acid permease VT48_01400 PF00561 alpha/beta hydrolase fold VT48_01405 PF01235 Sodium:alanine symporter family VT48_01410 PF04960 Glutaminase VT48_01415 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase VT48_01420 PF00072 Response regulator receiver domain VT48_01420 PF08664 YcbB domain VT48_01425 PF05225 helix-turn-helix, Psq domain VT48_01425 PF02810 SEC-C motif VT48_01430 PF17118 Domain of unknown function (DUF5105) VT48_01430 PF11611 Domain of unknown function (DUF4352) VT48_01435 PF00248 Aldo/keto reductase family VT48_01440 PF14501 GHKL domain VT48_01445 PF00072 Response regulator receiver domain VT48_01445 PF04397 LytTr DNA-binding domain VT48_01450 PF00005 ABC transporter VT48_01455 PF12679 ABC-2 family transporter protein VT48_01470 PF05922 Peptidase inhibitor I9 VT48_01470 PF00082 Subtilase family VT48_01475 PF17118 Domain of unknown function (DUF5105) VT48_01475 PF11611 Domain of unknown function (DUF4352) VT48_01480 PF07486 Cell Wall Hydrolase VT48_01495 PF00296 Luciferase-like monooxygenase VT48_01500 PF02342 TerD domain VT48_01505 PF02342 TerD domain VT48_01510 PF02342 TerD domain VT48_01515 PF03741 Integral membrane protein TerC family VT48_01540 PF14266 Putative component of 'biosynthetic module' VT48_01545 PF05816 Toxic anion resistance protein (TelA) VT48_01550 PF00571 CBS domain VT48_01550 PF00005 ABC transporter VT48_01555 PF00528 Binding-protein-dependent transport system inner membrane component VT48_01560 PF04069 Substrate binding domain of ABC-type glycine betaine transport system VT48_01575 PF01546 Peptidase family M20/M25/M40 VT48_01575 PF07687 Peptidase dimerisation domain VT48_01580 PF03606 C4-dicarboxylate anaerobic carrier VT48_01585 PF00056 lactate/malate dehydrogenase, NAD binding domain VT48_01585 PF02866 lactate/malate dehydrogenase, alpha/beta C-terminal domain VT48_01590 PF02652 L-lactate permease VT48_01595 PF00356 Bacterial regulatory proteins, lacI family VT48_01600 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family VT48_01605 PF05116 Sucrose-6F-phosphate phosphohydrolase VT48_01610 PF01408 Oxidoreductase family, NAD-binding Rossmann fold VT48_01610 PF02894 Oxidoreductase family, C-terminal alpha/beta domain VT48_01615 PF07690 Major Facilitator Superfamily VT48_01620 PF01810 LysE type translocator VT48_01635 PF08892 YqcI/YcgG family VT48_01640 PF00324 Amino acid permease VT48_01645 PF09347 Domain of unknown function (DUF1989) VT48_01650 PF02540 NAD synthase VT48_01675 PF00171 Aldehyde dehydrogenase family VT48_01680 PF01487 Type I 3-dehydroquinase VT48_01685 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain VT48_01685 PF00205 Thiamine pyrophosphate enzyme, central domain VT48_01685 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain VT48_01695 PF02515 CoA-transferase family III VT48_01700 PF07690 Major Facilitator Superfamily VT48_01710 PF09339 IclR helix-turn-helix domain VT48_01710 PF01614 Bacterial transcriptional regulator VT48_01715 PF01202 Shikimate kinase VT48_01720 PF08241 Methyltransferase domain VT48_01725 PF03466 LysR substrate binding domain VT48_01725 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family VT48_01730 PF00795 Carbon-nitrogen hydrolase VT48_01735 PF05448 Acetyl xylan esterase (AXE1) VT48_01745 PF10127 RNA repair pathway DNA polymerase beta family VT48_01750 PF01619 Proline dehydrogenase VT48_01755 PF00171 Aldehyde dehydrogenase family VT48_01760 PF17853 GGDEF-like domain VT48_01760 PF13556 PucR C-terminal helix-turn-helix domain VT48_01765 PF02040 Arsenical pump membrane protein VT48_01770 PF00528 Binding-protein-dependent transport system inner membrane component VT48_01775 PF00497 Bacterial extracellular solute-binding proteins, family 3 VT48_01780 PF10925 Protein of unknown function (DUF2680) VT48_01785 PF12706 Beta-lactamase superfamily domain VT48_01790 PF01037 Lrp/AsnC ligand binding domain VT48_01795 PF02522 Aminoglycoside 3-N-acetyltransferase VT48_01800 PF11033 Competence protein J (ComJ) VT48_01805 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain VT48_01805 PF17202 Single cache domain 3 VT48_01805 PF00672 HAMP domain VT48_01810 PF14040 Deoxyribonuclease NucA/NucB VT48_01820 PF05378 Hydantoinase/oxoprolinase N-terminal region VT48_01820 PF01968 Hydantoinase/oxoprolinase VT48_01835 PF08402 TOBE domain VT48_01835 PF00005 ABC transporter VT48_01840 PF00528 Binding-protein-dependent transport system inner membrane component VT48_01845 PF00528 Binding-protein-dependent transport system inner membrane component VT48_01850 PF00501 AMP-binding enzyme VT48_01850 PF13193 AMP-binding enzyme C-terminal domain VT48_01850 PF00668 Condensation domain VT48_01850 PF00550 Phosphopantetheine attachment site VT48_01855 PF00668 Condensation domain VT48_01855 PF13193 AMP-binding enzyme C-terminal domain VT48_01855 PF00501 AMP-binding enzyme VT48_01855 PF00550 Phosphopantetheine attachment site VT48_01860 PF00550 Phosphopantetheine attachment site VT48_01860 PF00668 Condensation domain VT48_01860 PF00501 AMP-binding enzyme VT48_01860 PF13193 AMP-binding enzyme C-terminal domain VT48_01860 PF00975 Thioesterase domain VT48_01865 PF00550 Phosphopantetheine attachment site VT48_01865 PF00501 AMP-binding enzyme VT48_01865 PF00668 Condensation domain VT48_01865 PF13193 AMP-binding enzyme C-terminal domain VT48_01870 PF13193 AMP-binding enzyme C-terminal domain VT48_01870 PF00550 Phosphopantetheine attachment site VT48_01870 PF00501 AMP-binding enzyme VT48_01870 PF00668 Condensation domain VT48_01875 PF00975 Thioesterase domain VT48_01890 PF00005 ABC transporter VT48_01905 PF00892 EamA-like transporter family VT48_01910 PF00155 Aminotransferase class I and II VT48_01910 PF00392 Bacterial regulatory proteins, gntR family VT48_01915 PF01648 4'-phosphopantetheinyl transferase superfamily VT48_01920 PF06445 GyrI-like small molecule binding domain VT48_01920 PF12833 Helix-turn-helix domain VT48_01935 PF00005 ABC transporter VT48_01940 PF00528 Binding-protein-dependent transport system inner membrane component VT48_01945 PF00497 Bacterial extracellular solute-binding proteins, family 3 VT48_01950 PF01738 Dienelactone hydrolase family VT48_01955 PF00324 Amino acid permease VT48_01960 PF00854 POT family VT48_01965 PF12708 Pectate lyase superfamily protein VT48_01965 PF13229 Right handed beta helix region VT48_01980 PF00497 Bacterial extracellular solute-binding proteins, family 3 VT48_01985 PF00528 Binding-protein-dependent transport system inner membrane component VT48_01990 PF00005 ABC transporter VT48_02000 PF03972 MmgE/PrpD family VT48_02015 PF00072 Response regulator receiver domain VT48_02015 PF00486 Transcriptional regulatory protein, C terminal VT48_02020 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase VT48_02020 PF00512 His Kinase A (phospho-acceptor) domain VT48_02020 PF00672 HAMP domain VT48_02025 PF01740 STAS domain VT48_02025 PF14361 RsbT co-antagonist protein rsbRD N-terminal domain VT48_02030 PF13840 ACT domain VT48_02030 PF00696 Amino acid kinase family VT48_02035 PF07690 Major Facilitator Superfamily VT48_02040 PF00440 Bacterial regulatory proteins, tetR family VT48_02050 PF01022 Bacterial regulatory protein, arsR family VT48_02060 PF03466 LysR substrate binding domain VT48_02060 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family VT48_02065 PF00392 Bacterial regulatory proteins, gntR family VT48_02065 PF00155 Aminotransferase class I and II VT48_02070 PF00202 Aminotransferase class-III VT48_02075 PF13520 Amino acid permease VT48_02080 PF00171 Aldehyde dehydrogenase family VT48_02085 PF02525 Flavodoxin-like fold VT48_02090 PF07987 Domain of unkown function (DUF1775) VT48_02095 PF04234 CopC domain VT48_02095 PF13115 YtkA-like VT48_02095 PF05425 Copper resistance protein D VT48_02100 PF02378 Phosphotransferase system, EIIC VT48_02100 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit VT48_02105 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 VT48_02110 PF01232 Mannitol dehydrogenase Rossmann domain VT48_02110 PF08125 Mannitol dehydrogenase C-terminal domain VT48_02115 PF02743 Cache domain VT48_02115 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain VT48_02115 PF00672 HAMP domain VT48_02150 PF12681 Glyoxalase-like domain VT48_02155 PF05901 Excalibur calcium-binding domain VT48_02165 PF03746 LamB/YcsF family VT48_02170 PF01566 Natural resistance-associated macrophage protein VT48_02175 PF07286 Protein of unknown function (DUF1445) VT48_02180 PF02682 Carboxyltransferase domain, subdomain C and D VT48_02185 PF02626 Carboxyltransferase domain, subdomain A and B VT48_02190 PF01614 Bacterial transcriptional regulator VT48_02190 PF09339 IclR helix-turn-helix domain VT48_02195 PF02525 Flavodoxin-like fold VT48_02200 PF13472 GDSL-like Lipase/Acylhydrolase family VT48_02210 PF08279 HTH domain VT48_02210 PF05043 Mga helix-turn-helix domain VT48_02210 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 VT48_02210 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit VT48_02210 PF00874 PRD domain VT48_02215 PF13649 Methyltransferase domain VT48_02225 PF16242 Pyridoxamine 5'-phosphate oxidase like VT48_02245 PF12823 Domain of unknown function (DUF3817) VT48_02250 PF07729 FCD domain VT48_02250 PF00392 Bacterial regulatory proteins, gntR family VT48_02255 PF12833 Helix-turn-helix domain VT48_02255 PF02311 AraC-like ligand binding domain VT48_02260 PF00892 EamA-like transporter family VT48_02265 PF00180 Isocitrate/isopropylmalate dehydrogenase VT48_02270 PF01131 DNA topoisomerase VT48_02270 PF01751 Toprim domain VT48_02280 PF00990 Diguanylate cyclase, GGDEF domain VT48_02285 PF10096 Uncharacterized protein conserved in bacteria (DUF2334) VT48_02295 PF03170 Bacterial cellulose synthase subunit VT48_02300 PF13520 Amino acid permease VT48_02305 PF00205 Thiamine pyrophosphate enzyme, central domain VT48_02305 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain VT48_02305 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain VT48_02310 PF14410 HNH/ENDO VII superfamily nuclease with conserved GHE residues VT48_02310 PF14449 Pre-toxin TG VT48_02310 PF04740 LXG domain of WXG superfamily VT48_02340 PF13302 Acetyltransferase (GNAT) domain VT48_02345 PF01566 Natural resistance-associated macrophage protein VT48_02350 PF04226 Transglycosylase associated protein VT48_02355 PF12787 EcsC protein family VT48_02360 PF03480 Bacterial extracellular solute-binding protein, family 7 VT48_02365 PF14689 Sensor_kinase_SpoOB-type, alpha-helical domain VT48_02365 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase VT48_02365 PF17203 Single cache domain 3 VT48_02370 PF08279 HTH domain VT48_02370 PF00072 Response regulator receiver domain VT48_02375 PF00375 Sodium:dicarboxylate symporter family VT48_02380 PF01594 AI-2E family transporter VT48_02385 PF00375 Sodium:dicarboxylate symporter family VT48_02390 PF00005 ABC transporter VT48_02405 PF00085 Thioredoxin VT48_02410 PF01820 D-ala D-ala ligase N-terminus VT48_02410 PF07478 D-ala D-ala ligase C-terminus VT48_02415 PF08245 Mur ligase middle domain VT48_02415 PF02875 Mur ligase family, glutamate ligase domain VT48_02415 PF01225 Mur ligase family, catalytic domain VT48_02420 PF12146 Serine aminopeptidase, S33 VT48_02430 PF00270 DEAD/DEAH box helicase VT48_02430 PF00271 Helicase conserved C-terminal domain VT48_02435 PF03703 Bacterial PH domain VT48_02440 PF03703 Bacterial PH domain VT48_02445 PF01694 Rhomboid family VT48_02450 PF01648 4'-phosphopantetheinyl transferase superfamily VT48_02460 PF01168 Alanine racemase, N-terminal domain VT48_02460 PF00842 Alanine racemase, C-terminal domain VT48_02465 PF01402 Ribbon-helix-helix protein, copG family VT48_02470 PF02452 PemK-like, MazF-like toxin of type II toxin-antitoxin system VT48_02475 PF08678 Rsbr N terminal VT48_02475 PF01740 STAS domain VT48_02480 PF01740 STAS domain VT48_02485 PF13581 Histidine kinase-like ATPase domain VT48_02490 PF07228 Stage II sporulation protein E (SpoIIE) VT48_02490 PF08673 Phosphoserine phosphatase RsbU, N-terminal domain VT48_02495 PF01740 STAS domain VT48_02500 PF13581 Histidine kinase-like ATPase domain VT48_02505 PF04542 Sigma-70 region 2 VT48_02505 PF04539 Sigma-70 region 3 VT48_02505 PF04545 Sigma-70, region 4 VT48_02510 PF07228 Stage II sporulation protein E (SpoIIE) VT48_02515 PF09371 Tex-like protein N-terminal domain VT48_02515 PF16921 Tex protein YqgF-like domain VT48_02515 PF00575 S1 RNA binding domain VT48_02515 PF17674 HHH domain VT48_02520 PF10263 SprT-like family VT48_02520 PF17283 SprT-like zinc ribbon domain VT48_02525 PF00676 Dehydrogenase E1 component VT48_02530 PF02780 Transketolase, C-terminal domain VT48_02530 PF02779 Transketolase, pyrimidine binding domain VT48_02535 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) VT48_02535 PF00364 Biotin-requiring enzyme VT48_02535 PF02817 e3 binding domain VT48_02540 PF07992 Pyridine nucleotide-disulphide oxidoreductase VT48_02540 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain VT48_02545 PF00158 Sigma-54 interaction domain VT48_02545 PF02954 Bacterial regulatory protein, Fis family VT48_02545 PF01590 GAF domain VT48_02590 PF00313 'Cold-shock' DNA-binding domain VT48_02595 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 VT48_02595 PF00367 phosphotransferase system, EIIB VT48_02595 PF02378 Phosphotransferase system, EIIC VT48_02600 PF04794 YdjC-like protein VT48_02605 PF00874 PRD domain VT48_02605 PF03123 CAT RNA binding domain VT48_02610 PF00107 Zinc-binding dehydrogenase VT48_02610 PF08240 Alcohol dehydrogenase GroES-like domain VT48_02615 PF13411 MerR HTH family regulatory protein VT48_02620 PF00722 Glycosyl hydrolases family 16 VT48_02630 PF00440 Bacterial regulatory proteins, tetR family VT48_02635 PF07690 Major Facilitator Superfamily VT48_02650 PF00106 short chain dehydrogenase VT48_02660 PF00710 Asparaginase, N-terminal VT48_02660 PF17763 Glutaminase/Asparaginase C-terminal domain VT48_02675 PF00440 Bacterial regulatory proteins, tetR family VT48_02675 PF16925 Tetracyclin repressor-like, C-terminal domain VT48_02680 PF07690 Major Facilitator Superfamily VT48_02710 PF00583 Acetyltransferase (GNAT) family VT48_02715 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily VT48_02725 PF00440 Bacterial regulatory proteins, tetR family VT48_02730 PF01872 RibD C-terminal domain VT48_02735 PF01047 MarR family VT48_02740 PF00881 Nitroreductase family VT48_02755 PF07883 Cupin domain VT48_02755 PF01381 Helix-turn-helix VT48_02760 PF01810 LysE type translocator VT48_02765 PF00583 Acetyltransferase (GNAT) family VT48_02775 PF01596 O-methyltransferase VT48_02785 PF03591 AzlC protein VT48_02790 PF00892 EamA-like transporter family VT48_02800 PF00375 Sodium:dicarboxylate symporter family VT48_02840 PF14175 YaaC-like Protein VT48_02845 PF00571 CBS domain VT48_02845 PF00478 IMP dehydrogenase / GMP reductase domain VT48_02850 PF00768 D-alanyl-D-alanine carboxypeptidase VT48_02850 PF07943 Penicillin-binding protein 5, C-terminal domain VT48_02855 PF00155 Aminotransferase class I and II VT48_02855 PF00392 Bacterial regulatory proteins, gntR family VT48_02860 PF01680 SOR/SNZ family VT48_02865 PF01174 SNO glutamine amidotransferase family VT48_02870 PF02403 Seryl-tRNA synthetase N-terminal domain VT48_02870 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) VT48_02875 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain VT48_02885 PF01712 Deoxynucleoside kinase VT48_02890 PF01712 Deoxynucleoside kinase VT48_02895 PF01476 LysM domain VT48_02895 PF00704 Glycosyl hydrolases family 18 VT48_02900 PF00857 Isochorismatase family VT48_02905 PF14437 MafB19-like deaminase VT48_02910 PF12169 DNA polymerase III subunits gamma and tau domain III VT48_02915 PF02575 YbaB/EbfC DNA-binding family VT48_02920 PF02132 RecR protein VT48_02920 PF13662 Toprim domain VT48_02925 PF10704 Protein of unknown function (DUF2508) VT48_02930 PF07441 SigmaK-factor processing regulatory protein BofA VT48_02960 PF00586 AIR synthase related protein, N-terminal domain VT48_02960 PF02769 AIR synthase related protein, C-terminal domain VT48_02965 PF02367 Threonylcarbamoyl adenosine biosynthesis protein TsaE VT48_02970 PF00814 Glycoprotease family VT48_02975 PF00583 Acetyltransferase (GNAT) family VT48_02980 PF00814 Glycoprotease family VT48_02985 PF00005 ABC transporter VT48_02985 PF12848 ABC transporter VT48_02985 PF16326 ABC transporter C-terminal domain VT48_02990 PF01967 MoaC family VT48_02995 PF02629 CoA binding domain VT48_02995 PF06971 Putative DNA-binding protein N-terminus VT48_03000 PF02416 mttA/Hcf106 family VT48_03005 PF00902 Sec-independent protein translocase protein (TatC) VT48_03015 PF14146 Domain of unknown function (DUF4305) VT48_03020 PF02517 CPBP intramembrane metalloprotease VT48_03025 PF00166 Chaperonin 10 Kd subunit VT48_03030 PF00118 TCP-1/cpn60 chaperonin family VT48_03035 PF01047 MarR family VT48_03040 PF04299 Putative FMN-binding domain VT48_03045 PF02557 D-alanyl-D-alanine carboxypeptidase VT48_03070 PF03330 Lytic transglycolase VT48_03075 PF07676 WD40-like Beta Propeller Repeat VT48_03085 PF07732 Multicopper oxidase VT48_03085 PF00394 Multicopper oxidase VT48_03085 PF07731 Multicopper oxidase VT48_03090 PF00324 Amino acid permease VT48_03095 PF01545 Cation efflux family VT48_03095 PF16916 Dimerisation domain of Zinc Transporter VT48_03100 PF07726 ATPase family associated with various cellular activities (AAA) VT48_03100 PF17863 AAA lid domain VT48_03105 PF01882 Protein of unknown function DUF58 VT48_03110 PF13559 Domain of unknown function (DUF4129) VT48_03110 PF11992 Domain of unknown function (DUF3488) VT48_03110 PF01841 Transglutaminase-like superfamily VT48_03115 PF00117 Glutamine amidotransferase class-I VT48_03115 PF02540 NAD synthase VT48_03115 PF00958 GMP synthase C terminal domain VT48_03125 PF04073 Aminoacyl-tRNA editing domain VT48_03130 PF12833 Helix-turn-helix domain VT48_03135 PF00682 HMGL-like VT48_03135 PF08502 LeuA allosteric (dimerisation) domain VT48_03155 PF13302 Acetyltransferase (GNAT) domain VT48_03165 PF08281 Sigma-70, region 4 VT48_03165 PF04542 Sigma-70 region 2 VT48_03175 PF07690 Major Facilitator Superfamily VT48_03180 PF03466 LysR substrate binding domain VT48_03180 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family VT48_03185 PF00860 Permease family VT48_03190 PF10055 Uncharacterized small protein (DUF2292) VT48_03200 PF10035 Uncharacterized protein conserved in bacteria (DUF2179) VT48_03205 PF14044 NETI protein VT48_03210 PF00731 AIR carboxylase VT48_03215 PF17769 Phosphoribosylaminoimidazole carboxylase C-terminal domain VT48_03215 PF02222 ATP-grasp domain VT48_03220 PF10397 Adenylosuccinate lyase C-terminus VT48_03220 PF00206 Lyase VT48_03225 PF01259 SAICAR synthetase VT48_03230 PF02700 Phosphoribosylformylglycinamidine (FGAM) synthase VT48_03240 PF00586 AIR synthase related protein, N-terminal domain VT48_03240 PF02769 AIR synthase related protein, C-terminal domain VT48_03240 PF18072 Formylglycinamide ribonucleotide amidotransferase linker domain VT48_03245 PF00156 Phosphoribosyl transferase domain VT48_03250 PF00586 AIR synthase related protein, N-terminal domain VT48_03250 PF02769 AIR synthase related protein, C-terminal domain VT48_03255 PF00551 Formyl transferase VT48_03260 PF01808 AICARFT/IMPCHase bienzyme VT48_03260 PF02142 MGS-like domain VT48_03265 PF01071 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain VT48_03265 PF02843 Phosphoribosylglycinamide synthetase, C domain VT48_03265 PF02844 Phosphoribosylglycinamide synthetase, N domain VT48_03285 PF00202 Aminotransferase class-III VT48_03290 PF01144 Coenzyme A transferase VT48_03295 PF01144 Coenzyme A transferase VT48_03300 PF07687 Peptidase dimerisation domain VT48_03300 PF01546 Peptidase family M20/M25/M40 VT48_03305 PF11127 Protein of unknown function (DUF2892) VT48_03310 PF01979 Amidohydrolase family VT48_03310 PF13382 Adenine deaminase C-terminal domain VT48_03315 PF01371 Trp repressor protein VT48_03325 PF01645 Conserved region in glutamate synthase VT48_03340 PF01884 PcrB family VT48_03345 PF00580 UvrD/REP helicase N-terminal domain VT48_03345 PF13361 UvrD-like helicase C-terminal domain VT48_03350 PF12826 Helix-hairpin-helix motif VT48_03350 PF03119 NAD-dependent DNA ligase C4 zinc finger domain VT48_03350 PF03120 NAD-dependent DNA ligase OB-fold domain VT48_03350 PF01653 NAD-dependent DNA ligase adenylation domain VT48_03350 PF00533 BRCA1 C Terminus (BRCT) domain VT48_03355 PF07537 CamS sex pheromone cAM373 precursor VT48_03365 PF01636 Phosphotransferase enzyme family VT48_03370 PF02308 MgtC family VT48_03375 PF00474 Sodium:solute symporter family VT48_03380 PF02686 Glu-tRNAGln amidotransferase C subunit VT48_03385 PF01425 Amidase VT48_03390 PF02934 GatB/GatE catalytic domain VT48_03390 PF02637 GatB domain VT48_03395 PF00440 Bacterial regulatory proteins, tetR family VT48_03400 PF00873 AcrB/AcrD/AcrF family VT48_03405 PF01156 Inosine-uridine preferring nucleoside hydrolase VT48_03410 PF00781 Diacylglycerol kinase catalytic domain VT48_03415 PF05958 tRNA (Uracil-5-)-methyltransferase VT48_03415 PF01938 TRAM domain VT48_03420 PF01207 Dihydrouridine synthase (Dus) VT48_03435 PF02082 Transcriptional regulator VT48_03440 PF07992 Pyridine nucleotide-disulphide oxidoreductase VT48_03450 PF13021 Domain of unknown function (DUF3885) VT48_03455 PF11975 Family 4 glycosyl hydrolase C-terminal domain VT48_03455 PF02056 Family 4 glycosyl hydrolase VT48_03460 PF01380 SIS domain VT48_03460 PF01418 Helix-turn-helix domain, rpiR family VT48_03465 PF07690 Major Facilitator Superfamily VT48_03475 PF03466 LysR substrate binding domain VT48_03475 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family VT48_03485 PF13037 Domain of unknown function (DUF3898) VT48_03485 PF13039 Protein of unknown function (DUF3900) VT48_03490 PF00483 Nucleotidyl transferase VT48_03495 PF16363 GDP-mannose 4,6 dehydratase VT48_03500 PF03407 Nucleotide-diphospho-sugar transferase VT48_03505 PF00535 Glycosyl transferase family 2 VT48_03510 PF03407 Nucleotide-diphospho-sugar transferase VT48_03515 PF07690 Major Facilitator Superfamily VT48_03520 PF05223 NTF2-like N-terminal transpeptidase domain VT48_03520 PF03717 Penicillin-binding Protein dimerisation domain VT48_03520 PF00905 Penicillin binding protein transpeptidase domain VT48_03525 PF00939 Sodium:sulfate symporter transmembrane region VT48_03540 PF00011 Hsp20/alpha crystallin family VT48_03555 PF13520 Amino acid permease VT48_03560 PF00535 Glycosyl transferase family 2 VT48_03560 PF13181 Tetratricopeptide repeat VT48_03565 PF00005 ABC transporter VT48_03565 PF16326 ABC transporter C-terminal domain VT48_03565 PF12848 ABC transporter VT48_03570 PF02649 Type I GTP cyclohydrolase folE2 VT48_03575 PF13411 MerR HTH family regulatory protein VT48_03580 PF07690 Major Facilitator Superfamily VT48_03585 PF12848 ABC transporter VT48_03585 PF00005 ABC transporter VT48_03590 PF00271 Helicase conserved C-terminal domain VT48_03590 PF00270 DEAD/DEAH box helicase VT48_03595 PF00107 Zinc-binding dehydrogenase VT48_03595 PF16884 N-terminal domain of oxidoreductase VT48_03600 PF11486 Protein of unknown function (DUF3212) VT48_03605 PF11181 Heat induced stress protein YflT VT48_03615 PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase VT48_03615 PF00925 GTP cyclohydrolase II VT48_03620 PF03781 Sulfatase-modifying factor enzyme 1 VT48_03630 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region VT48_03630 PF01872 RibD C-terminal domain VT48_03660 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase VT48_03660 PF14689 Sensor_kinase_SpoOB-type, alpha-helical domain VT48_03665 PF00072 Response regulator receiver domain VT48_03665 PF12431 Transcriptional regulator VT48_03665 PF08279 HTH domain VT48_03670 PF03401 Tripartite tricarboxylate transporter family receptor VT48_03675 PF03600 Citrate transporter VT48_03685 PF05870 Phenolic acid decarboxylase (PAD) VT48_03690 PF10400 Virulence activator alpha C-term VT48_03690 PF03551 Transcriptional regulator PadR-like family VT48_03695 PF02898 Nitric oxide synthase, oxygenase domain VT48_03705 PF00708 Acylphosphatase VT48_03710 PF03475 3-alpha domain VT48_03710 PF03473 MOSC domain VT48_03715 PF00557 Metallopeptidase family M24 VT48_03720 PF00367 phosphotransferase system, EIIB VT48_03720 PF02378 Phosphotransferase system, EIIC VT48_03725 PF05675 Protein of unknown function (DUF817) VT48_03735 PF14172 Domain of unknown function (DUF4309) VT48_03740 PF00884 Sulfatase VT48_03745 PF00282 Pyridoxal-dependent decarboxylase conserved domain VT48_03750 PF00672 HAMP domain VT48_03750 PF02743 Cache domain VT48_03750 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain VT48_03755 PF09350 Domain of unknown function (DUF1992) VT48_03760 PF02378 Phosphotransferase system, EIIC VT48_03760 PF00367 phosphotransferase system, EIIB VT48_03765 PF16657 Maltogenic Amylase, C-terminal domain VT48_03765 PF00128 Alpha amylase, catalytic domain VT48_03770 PF00392 Bacterial regulatory proteins, gntR family VT48_03770 PF07702 UTRA domain VT48_03780 PF02872 5'-nucleotidase, C-terminal domain VT48_03780 PF00149 Calcineurin-like phosphoesterase VT48_03785 PF01965 DJ-1/PfpI family VT48_03790 PF06569 Protein of unknown function (DUF1128) VT48_03795 PF01235 Sodium:alanine symporter family VT48_03805 PF01451 Low molecular weight phosphotyrosine protein phosphatase VT48_03815 PF03631 Virulence factor BrkB VT48_03820 PF07690 Major Facilitator Superfamily VT48_03830 PF01699 Sodium/calcium exchanger protein VT48_03835 PF14167 YfkD-like protein VT48_03840 PF01709 Transcriptional regulator VT48_03850 PF00924 Mechanosensitive ion channel VT48_03855 PF04055 Radical SAM superfamily VT48_03855 PF08756 YfkB-like domain VT48_03865 PF01522 Polysaccharide deacetylase VT48_03870 PF10898 Protein of unknown function (DUF2716) VT48_03875 PF01544 CorA-like Mg2+ transporter protein VT48_03885 PF00730 HhH-GPD superfamily base excision DNA repair protein VT48_03890 PF05958 tRNA (Uracil-5-)-methyltransferase VT48_03890 PF01938 TRAM domain VT48_03910 PF13411 MerR HTH family regulatory protein VT48_03910 PF07739 TipAS antibiotic-recognition domain VT48_03915 PF07690 Major Facilitator Superfamily VT48_03930 PF03129 Anticodon binding domain VT48_03930 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) VT48_03930 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain VT48_03930 PF02824 TGS domain VT48_03980 PF00893 Small Multidrug Resistance protein VT48_03985 PF00893 Small Multidrug Resistance protein VT48_03990 PF17934 Tetracyclin repressor-like, C-terminal domain VT48_03990 PF00440 Bacterial regulatory proteins, tetR family VT48_04005 PF00657 GDSL-like Lipase/Acylhydrolase VT48_04010 PF07992 Pyridine nucleotide-disulphide oxidoreductase VT48_04015 PF12833 Helix-turn-helix domain VT48_04015 PF02805 Metal binding domain of Ada VT48_04020 PF01497 Periplasmic binding protein VT48_04025 PF00664 ABC transporter transmembrane region VT48_04025 PF00005 ABC transporter VT48_04030 PF02694 Uncharacterised BCR, YnfA/UPF0060 family VT48_04035 PF04545 Sigma-70, region 4 VT48_04035 PF04542 Sigma-70 region 2 VT48_04050 PF08240 Alcohol dehydrogenase GroES-like domain VT48_04050 PF00107 Zinc-binding dehydrogenase VT48_04055 PF12867 DinB superfamily VT48_04065 PF01047 MarR family VT48_04070 PF09924 Uncharacterised conserved protein (DUF2156) VT48_04070 PF03706 Lysylphosphatidylglycerol synthase TM region VT48_04085 PF18801 response regulator aspartate phosphatase H, N terminal VT48_04090 PF00881 Nitroreductase family VT48_04100 PF08338 Domain of unknown function (DUF1731) VT48_04100 PF01370 NAD dependent epimerase/dehydratase family VT48_04105 PF02631 RecX family VT48_04110 PF08838 Protein of unknown function (DUF1811) VT48_04115 PF08176 Small acid-soluble spore protein K family VT48_04120 PF14043 WVELL protein VT48_04125 PF00535 Glycosyl transferase family 2 VT48_04130 PF09586 Bacterial membrane protein YfhO VT48_04135 PF01494 FAD binding domain VT48_04150 PF00190 Cupin VT48_04155 PF04545 Sigma-70, region 4 VT48_04165 PF04307 LexA-binding, inner membrane-associated putative hydrolase VT48_04170 PF14815 NUDIX domain VT48_04170 PF00730 HhH-GPD superfamily base excision DNA repair protein VT48_04185 PF04259 Small, acid-soluble spore protein, gamma-type VT48_04195 PF04167 Protein of unknown function (DUF402) VT48_04200 PF00664 ABC transporter transmembrane region VT48_04200 PF00005 ABC transporter VT48_04205 PF00005 ABC transporter VT48_04205 PF08352 Oligopeptide/dipeptide transporter, C-terminal region VT48_04210 PF00005 ABC transporter VT48_04210 PF08352 Oligopeptide/dipeptide transporter, C-terminal region VT48_04215 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle VT48_04230 PF06081 Aromatic acid exporter family member 1 VT48_04235 PF00202 Aminotransferase class-III VT48_04240 PF00578 AhpC/TSA family VT48_04245 PF01475 Ferric uptake regulator family VT48_04250 PF11023 Zinc-ribbon containing domain VT48_04255 PF14540 Nucleotidyltransferase-like VT48_04255 PF18576 Helix-turn-helix domain VT48_04400 PF00884 Sulfatase VT48_04405 PF10502 Signal peptidase, peptidase S26 VT48_04410 PF01053 Cys/Met metabolism PLP-dependent enzyme VT48_04420 PF00005 ABC transporter VT48_04425 PF09084 NMT1/THI5 like VT48_04430 PF00528 Binding-protein-dependent transport system inner membrane component VT48_04435 PF00296 Luciferase-like monooxygenase VT48_04450 PF00005 ABC transporter VT48_04485 PF08331 Domain of unknown function (DUF1730) VT48_04490 PF12671 Putative amidase domain VT48_04495 PF00588 SpoU rRNA Methylase family VT48_04500 PF08298 PrkA AAA domain VT48_04500 PF06798 PrkA serine protein kinase C-terminal domain VT48_04505 PF04285 Protein of unknown function (DUF444) VT48_04515 PF07690 Major Facilitator Superfamily VT48_04520 PF03358 NADPH-dependent FMN reductase VT48_04530 PF00313 'Cold-shock' DNA-binding domain VT48_04535 PF07694 5TMR of 5TMR-LYT VT48_04535 PF00990 Diguanylate cyclase, GGDEF domain VT48_04550 PF09580 Sporulation lipoprotein YhcN/YlaJ (Spore_YhcN_YlaJ) VT48_04560 PF07875 Coat F domain VT48_04565 PF13188 PAS domain VT48_04565 PF00989 PAS fold VT48_04565 PF00512 His Kinase A (phospho-acceptor) domain VT48_04565 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase VT48_04565 PF13426 PAS domain VT48_04570 PF02872 5'-nucleotidase, C-terminal domain VT48_04570 PF00149 Calcineurin-like phosphoesterase VT48_04570 PF00565 Staphylococcal nuclease homologue VT48_04570 PF00746 LPXTG cell wall anchor motif VT48_04575 PF04203 Sortase domain VT48_04580 PF01479 S4 domain VT48_04580 PF00849 RNA pseudouridylate synthase VT48_04590 PF13419 Haloacid dehalogenase-like hydrolase VT48_04595 PF00583 Acetyltransferase (GNAT) family VT48_04595 PF00795 Carbon-nitrogen hydrolase VT48_04615 PF17853 GGDEF-like domain VT48_04615 PF13556 PucR C-terminal helix-turn-helix domain VT48_04615 PF05651 Putative sugar diacid recognition VT48_04620 PF00202 Aminotransferase class-III VT48_04625 PF04309 Glycerol-3-phosphate responsive antiterminator VT48_04630 PF00230 Major intrinsic protein VT48_04635 PF00370 FGGY family of carbohydrate kinases, N-terminal domain VT48_04635 PF02782 FGGY family of carbohydrate kinases, C-terminal domain VT48_04640 PF16901 C-terminal domain of alpha-glycerophosphate oxidase VT48_04640 PF01266 FAD dependent oxidoreductase VT48_04645 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III VT48_04645 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I VT48_04645 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II VT48_04645 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain VT48_04650 PF13185 GAF domain VT48_04650 PF07730 Histidine kinase VT48_04655 PF00072 Response regulator receiver domain VT48_04655 PF00196 Bacterial regulatory proteins, luxR family VT48_04660 PF14148 YhdB-like protein VT48_04665 PF13028 Protein of unknown function (DUF3889) VT48_04670 PF06628 Catalase-related immune-responsive VT48_04670 PF00199 Catalase VT48_04675 PF02082 Transcriptional regulator VT48_04680 PF00175 Oxidoreductase NAD-binding domain VT48_04680 PF00042 Globin VT48_04680 PF00970 Oxidoreductase FAD-binding domain VT48_04685 PF04293 SpoVR like protein VT48_04690 PF00245 Alkaline phosphatase VT48_04695 PF01476 LysM domain VT48_04695 PF00877 NlpC/P60 family VT48_04700 PF13520 Amino acid permease VT48_04705 PF17453 Sigma-M inhibitor VT48_04710 PF13800 Sigma factor regulator N-terminal VT48_04710 PF13791 Sigma factor regulator C-terminal VT48_04715 PF08281 Sigma-70, region 4 VT48_04715 PF04542 Sigma-70 region 2 VT48_04720 PF01553 Acyltransferase VT48_04725 PF01595 Cyclin M transmembrane N-terminal domain VT48_04725 PF00571 CBS domain VT48_04725 PF03471 Transporter associated domain VT48_04730 PF13411 MerR HTH family regulatory protein VT48_04735 PF03471 Transporter associated domain VT48_04735 PF01595 Cyclin M transmembrane N-terminal domain VT48_04735 PF00571 CBS domain VT48_04745 PF02537 CrcB-like protein, Camphor Resistance (CrcB) VT48_04750 PF02537 CrcB-like protein, Camphor Resistance (CrcB) VT48_04755 PF03009 Glycerophosphoryl diester phosphodiesterase family VT48_04760 PF00924 Mechanosensitive ion channel VT48_04765 PF02146 Sir2 family VT48_04770 PF01522 Polysaccharide deacetylase VT48_04775 PF01063 Amino-transferase class IV VT48_04780 PF00582 Universal stress protein family VT48_04785 PF00664 ABC transporter transmembrane region VT48_04785 PF00005 ABC transporter VT48_04790 PF00664 ABC transporter transmembrane region VT48_04790 PF00005 ABC transporter VT48_04795 PF13460 NAD(P)H-binding VT48_04800 PF00269 Small, acid-soluble spore proteins, alpha/beta type VT48_04805 PF03459 TOBE domain VT48_04805 PF00005 ABC transporter VT48_04805 PF17912 MalK OB fold domain VT48_04810 PF13556 PucR C-terminal helix-turn-helix domain VT48_04815 PF17277 Family of unknown function (DUF5342) VT48_04820 PF14398 YheC/D like ATP-grasp VT48_04825 PF14398 YheC/D like ATP-grasp VT48_04830 PF04286 Protein of unknown function (DUF445) VT48_04835 PF06133 Control of competence regulator ComK, YlbF/YmcA VT48_04845 PF04055 Radical SAM superfamily VT48_04850 PF13434 L-lysine 6-monooxygenase (NADPH-requiring) VT48_04855 PF00999 Sodium/hydrogen exchanger family VT48_04860 PF02080 TrkA-C domain VT48_04870 PF00378 Enoyl-CoA hydratase/isomerase VT48_04875 PF14120 YhzD-like protein VT48_04880 PF00149 Calcineurin-like phosphoesterase VT48_04885 PF13514 AAA domain VT48_04890 PF01966 HD domain VT48_04895 PF14147 Sporulation protein YhaL VT48_04905 PF09680 Family of unknown function VT48_04910 PF09680 Family of unknown function VT48_04915 PF11667 Putative zincin peptidase VT48_04920 PF08963 Protein of unknown function (DUF1878) VT48_04925 PF01047 MarR family VT48_04930 PF12732 YtxH-like protein VT48_04940 PF17099 Tryptophan transporter TrpP VT48_04945 PF00266 Aminotransferase class-V VT48_04950 PF01230 HIT domain VT48_04955 PF00005 ABC transporter VT48_04960 PF05975 Bacterial ABC transporter protein EcsB VT48_04965 PF12787 EcsC protein family VT48_04970 PF01546 Peptidase family M20/M25/M40 VT48_04970 PF07687 Peptidase dimerisation domain VT48_04980 PF03992 Antibiotic biosynthesis monooxygenase VT48_04985 PF00905 Penicillin binding protein transpeptidase domain VT48_04985 PF00912 Transglycosylase VT48_04990 PF01208 Uroporphyrinogen decarboxylase (URO-D) VT48_05005 PF17932 Tetracyclin repressor-like, C-terminal domain VT48_05005 PF00440 Bacterial regulatory proteins, tetR family VT48_05015 PF05343 M42 glutamyl aminopeptidase VT48_05020 PF00375 Sodium:dicarboxylate symporter family VT48_05025 PF12706 Beta-lactamase superfamily domain VT48_05030 PF03099 Biotin/lipoate A/B protein ligase family VT48_05030 PF10437 Bacterial lipoate protein ligase C-terminus VT48_05035 PF00501 AMP-binding enzyme VT48_05035 PF13193 AMP-binding enzyme C-terminal domain VT48_05045 PF16491 CAAX prenyl protease N-terminal, five membrane helices VT48_05045 PF01435 Peptidase family M48 VT48_05050 PF05922 Peptidase inhibitor I9 VT48_05050 PF00082 Subtilase family VT48_05055 PF00300 Histidine phosphatase superfamily (branch 1) VT48_05060 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain VT48_05065 PF00355 Rieske [2Fe-2S] domain VT48_05065 PF01266 FAD dependent oxidoreductase VT48_05075 PF08858 IDEAL domain VT48_05080 PF06338 ComK protein VT48_05085 PF01168 Alanine racemase, N-terminal domain VT48_05085 PF14031 Putative serine dehydratase domain VT48_05095 PF00155 Aminotransferase class I and II VT48_05095 PF00392 Bacterial regulatory proteins, gntR family VT48_05100 PF07690 Major Facilitator Superfamily VT48_05105 PF01337 Barstar (barnase inhibitor) VT48_05110 PF01032 FecCD transport family VT48_05115 PF01032 FecCD transport family VT48_05120 PF00005 ABC transporter VT48_05125 PF01497 Periplasmic binding protein VT48_05130 PF03816 Cell envelope-related transcriptional attenuator domain VT48_05145 PF09335 SNARE associated Golgi protein VT48_05150 PF10502 Signal peptidase, peptidase S26 VT48_05155 PF05145 Transition state regulatory protein AbrB VT48_05170 PF07681 DoxX VT48_05175 PF02915 Rubrerythrin VT48_05180 PF12705 PD-(D/E)XK nuclease superfamily VT48_05185 PF00580 UvrD/REP helicase N-terminal domain VT48_05185 PF12705 PD-(D/E)XK nuclease superfamily VT48_05185 PF13361 UvrD-like helicase C-terminal domain VT48_05190 PF12320 Type 5 capsule protein repressor C-terminal domain VT48_05190 PF00149 Calcineurin-like phosphoesterase VT48_05195 PF13476 AAA domain VT48_05205 PF10676 Spore germination protein gerPA/gerPF VT48_05210 PF10970 Spore germination protein GerPE VT48_05220 PF10737 Spore germination protein GerPC VT48_05225 PF10803 Spore germination GerPB VT48_05230 PF10676 Spore germination protein gerPA/gerPF VT48_05240 PF08757 CotH kinase protein VT48_05255 PF01557 Fumarylacetoacetate (FAA) hydrolase family VT48_05260 PF07457 Protein of unknown function (DUF1516) VT48_05265 PF10949 Protein of unknown function (DUF2777) VT48_05270 PF00733 Asparagine synthase VT48_05270 PF13537 Glutamine amidotransferase domain VT48_05275 PF01593 Flavin containing amine oxidoreductase VT48_05290 PF01554 MatE VT48_05295 PF02311 AraC-like ligand binding domain VT48_05295 PF12833 Helix-turn-helix domain VT48_05315 PF00202 Aminotransferase class-III VT48_05320 PF00282 Pyridoxal-dependent decarboxylase conserved domain VT48_05325 PF04183 IucA / IucC family VT48_05325 PF06276 Ferric iron reductase FhuF-like transporter VT48_05335 PF13434 L-lysine 6-monooxygenase (NADPH-requiring) VT48_05340 PF04183 IucA / IucC family VT48_05340 PF06276 Ferric iron reductase FhuF-like transporter VT48_05355 PF02607 B12 binding domain VT48_05355 PF02574 Homocysteine S-methyltransferase VT48_05355 PF02965 Vitamin B12 dependent methionine synthase, activation domain VT48_05355 PF02310 B12 binding domain VT48_05355 PF00809 Pterin binding enzyme VT48_05360 PF02219 Methylenetetrahydrofolate reductase VT48_05360 PF02574 Homocysteine S-methyltransferase VT48_05365 PF04461 Protein of unknown function (DUF520) VT48_05370 PF17783 CvfB-like winged helix domain VT48_05370 PF13509 S1 domain VT48_05380 PF02743 Cache domain VT48_05380 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain VT48_05380 PF00672 HAMP domain VT48_05385 PF02645 Uncharacterised protein, DegV family COG1307 VT48_05390 PF02588 Uncharacterised 5xTM membrane BCR, YitT family COG1284 VT48_05390 PF10035 Uncharacterized protein conserved in bacteria (DUF2179) VT48_05395 PF12690 Intracellular proteinase inhibitor VT48_05400 PF12758 Protein of unknown function (DUF3813) VT48_05415 PF00326 Prolyl oligopeptidase family VT48_05420 PF01883 Iron-sulfur cluster assembly protein VT48_05425 PF01565 FAD binding domain VT48_05430 PF07690 Major Facilitator Superfamily VT48_05435 PF01118 Semialdehyde dehydrogenase, NAD binding domain VT48_05435 PF02774 Semialdehyde dehydrogenase, dimerisation domain VT48_05440 PF01960 ArgJ family VT48_05445 PF00696 Amino acid kinase family VT48_05450 PF00202 Aminotransferase class-III VT48_05455 PF00988 Carbamoyl-phosphate synthase small chain, CPSase domain VT48_05455 PF00117 Glutamine amidotransferase class-I VT48_05460 PF02787 Carbamoyl-phosphate synthetase large chain, oligomerisation domain VT48_05460 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain VT48_05465 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain VT48_05465 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain VT48_05470 PF14168 YjzC-like protein VT48_05475 PF07690 Major Facilitator Superfamily VT48_05480 PF11151 Protein of unknown function (DUF2929) VT48_05495 PF02608 ABC transporter substrate-binding protein PnrA-like VT48_05500 PF10815 ComZ VT48_05510 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal VT48_05510 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III VT48_05515 PF00109 Beta-ketoacyl synthase, N-terminal domain VT48_05515 PF02801 Beta-ketoacyl synthase, C-terminal domain VT48_05520 PF10026 Predicted Zn-dependent protease (DUF2268) VT48_05525 PF08352 Oligopeptide/dipeptide transporter, C-terminal region VT48_05525 PF00005 ABC transporter VT48_05530 PF00005 ABC transporter VT48_05530 PF08352 Oligopeptide/dipeptide transporter, C-terminal region VT48_05535 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle VT48_05540 PF00528 Binding-protein-dependent transport system inner membrane component VT48_05545 PF00528 Binding-protein-dependent transport system inner membrane component VT48_05545 PF12911 N-terminal TM domain of oligopeptide transport permease C VT48_05550 PF12227 Protein of unknown function (DUF3603) VT48_05555 PF00579 tRNA synthetases class I (W and Y) VT48_05560 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle VT48_05565 PF00528 Binding-protein-dependent transport system inner membrane component VT48_05570 PF12911 N-terminal TM domain of oligopeptide transport permease C VT48_05570 PF00528 Binding-protein-dependent transport system inner membrane component VT48_05575 PF00005 ABC transporter VT48_05575 PF08352 Oligopeptide/dipeptide transporter, C-terminal region VT48_05580 PF08352 Oligopeptide/dipeptide transporter, C-terminal region VT48_05580 PF00005 ABC transporter VT48_05590 PF13508 Acetyltransferase (GNAT) domain VT48_05595 PF03960 ArsC family VT48_05600 PF03741 Integral membrane protein TerC family VT48_05605 PF05389 Negative regulator of genetic competence (MecA) VT48_05610 PF13396 Phospholipase_D-nuclease N-terminal VT48_05610 PF13091 PLD-like domain VT48_05620 PF01432 Peptidase family M3 VT48_05620 PF08439 Oligopeptidase F VT48_05635 PF01152 Bacterial-like globin VT48_05640 PF01464 Transglycosylase SLT domain VT48_05645 PF01928 CYTH domain VT48_05655 PF04607 Region found in RelA / SpoT proteins VT48_05660 PF01513 ATP-NAD kinase VT48_05665 PF00849 RNA pseudouridylate synthase VT48_05670 PF00149 Calcineurin-like phosphoesterase VT48_05675 PF00999 Sodium/hydrogen exchanger family VT48_05675 PF02080 TrkA-C domain VT48_05675 PF02254 TrkA-N domain VT48_05680 PF03070 TENA/THI-4/PQQC family VT48_05685 PF02581 Thiamine monophosphate synthase VT48_05690 PF01266 FAD dependent oxidoreductase VT48_05695 PF02597 ThiS family VT48_05700 PF05690 Thiazole biosynthesis protein ThiG VT48_05705 PF00899 ThiF family VT48_05710 PF08543 Phosphomethylpyrimidine kinase VT48_05720 PF14153 Spore coat protein CotO VT48_05725 PF10612 Spore coat protein Z VT48_05730 PF10612 Spore coat protein Z VT48_05735 PF07552 Spore Coat Protein X and V domain VT48_05745 PF07552 Spore Coat Protein X and V domain VT48_05750 PF07098 Protein of unknown function (DUF1360) VT48_05765 PF14069 Stage VI sporulation protein F VT48_05770 PF00580 UvrD/REP helicase N-terminal domain VT48_05770 PF13361 UvrD-like helicase C-terminal domain VT48_05780 PF13673 Acetyltransferase (GNAT) domain VT48_05790 PF00756 Putative esterase VT48_05795 PF01053 Cys/Met metabolism PLP-dependent enzyme VT48_05800 PF01053 Cys/Met metabolism PLP-dependent enzyme VT48_05810 PF00589 Phage integrase family VT48_05810 PF14659 Phage integrase, N-terminal SAM-like domain VT48_05815 PF06114 IrrE N-terminal-like domain VT48_05825 PF01381 Helix-turn-helix VT48_05855 PF09466 Hypothetical protein Yqai VT48_05885 PF03796 DnaB-like helicase C terminal domain VT48_05885 PF00772 DnaB-like helicase N terminal domain VT48_05895 PF05866 Endodeoxyribonuclease RusA VT48_05960 PF10668 Phage terminase small subunit VT48_05965 PF04466 Phage terminase large subunit VT48_05965 PF17288 Terminase RNAseH like domain VT48_05970 PF04860 Phage portal protein VT48_05975 PF04233 Phage Mu protein F like protein VT48_05985 PF14550 Putative phage serine protease XkdF VT48_05990 PF05065 Phage capsid family VT48_05995 PF14553 YqbF, hypothetical protein domain VT48_06000 PF11436 Protein of unknown function (DUF3199) VT48_06005 PF12206 Domain of unknown function (DUF3599) VT48_06010 PF04883 Bacteriophage HK97-gp10, putative tail-component VT48_06025 PF04984 Phage tail sheath protein subtilisin-like domain VT48_06025 PF17481 Phage tail sheath protein beta-sandwich domain VT48_06025 PF17482 Phage tail sheath C-terminal domain VT48_06030 PF09393 Phage tail tube protein VT48_06035 PF08890 Phage XkdN-like tail assembly chaperone protein, TAC VT48_06040 PF01464 Transglycosylase SLT domain VT48_06040 PF01464 Transglycosylase SLT domain VT48_06045 PF01476 LysM domain VT48_06055 PF10844 Protein of unknown function (DUF2577) VT48_06060 PF10934 Protein of unknown function (DUF2634) VT48_06065 PF04865 Baseplate J-like protein VT48_06070 PF10076 Uncharacterised protein conserved in bacteria (DUF2313) VT48_06095 PF10960 BhlA holin family VT48_06100 PF04688 SPP1 phage holin VT48_06105 PF01471 Putative peptidoglycan binding domain VT48_06105 PF01510 N-acetylmuramoyl-L-alanine amidase VT48_06120 PF13614 AAA domain VT48_06155 PF03255 Acetyl co-enzyme A carboxylase carboxyltransferase alpha subunit VT48_06170 PF13176 Tetratricopeptide repeat VT48_06170 PF18801 response regulator aspartate phosphatase H, N terminal VT48_06175 PF13673 Acetyltransferase (GNAT) domain VT48_06185 PF00302 Chloramphenicol acetyltransferase VT48_06190 PF18801 response regulator aspartate phosphatase H, N terminal VT48_06190 PF13176 Tetratricopeptide repeat VT48_06205 PF10852 Protein of unknown function (DUF2651) VT48_06210 PF01636 Phosphotransferase enzyme family VT48_06215 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family VT48_06215 PF03466 LysR substrate binding domain VT48_06220 PF01177 Asp/Glu/Hydantoin racemase VT48_06235 PF03466 LysR substrate binding domain VT48_06235 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family VT48_06240 PF07690 Major Facilitator Superfamily VT48_06245 PF07992 Pyridine nucleotide-disulphide oxidoreductase VT48_06245 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain VT48_06265 PF00842 Alanine racemase, C-terminal domain VT48_06265 PF01168 Alanine racemase, N-terminal domain VT48_06270 PF00107 Zinc-binding dehydrogenase VT48_06270 PF08240 Alcohol dehydrogenase GroES-like domain VT48_06285 PF00669 Bacterial flagellin N-terminal helical region VT48_06285 PF00700 Bacterial flagellin C-terminal helical region VT48_06290 PF00669 Bacterial flagellin N-terminal helical region VT48_06290 PF00700 Bacterial flagellin C-terminal helical region VT48_06295 PF00669 Bacterial flagellin N-terminal helical region VT48_06295 PF00700 Bacterial flagellin C-terminal helical region VT48_06300 PF00700 Bacterial flagellin C-terminal helical region VT48_06300 PF00669 Bacterial flagellin N-terminal helical region VT48_06305 PF01494 FAD binding domain VT48_06320 PF05908 Poly-gamma-glutamate hydrolase VT48_06325 PF06114 IrrE N-terminal-like domain VT48_06330 PF01510 N-acetylmuramoyl-L-alanine amidase VT48_06330 PF01476 LysM domain VT48_06330 PF01471 Putative peptidoglycan binding domain VT48_06335 PF14185 Antitoxin SpoIISB, type II toxin-antitoxin system VT48_06340 PF14171 Toxin SpoIISA, type II toxin-antitoxin system VT48_06345 PF01384 Phosphate transporter family VT48_06350 PF01865 Protein of unknown function DUF47 VT48_06370 PF00528 Binding-protein-dependent transport system inner membrane component VT48_06375 PF00528 Binding-protein-dependent transport system inner membrane component VT48_06390 PF03611 PTS system sugar-specific permease component VT48_06405 PF08240 Alcohol dehydrogenase GroES-like domain VT48_06405 PF00107 Zinc-binding dehydrogenase VT48_06410 PF00676 Dehydrogenase E1 component VT48_06415 PF00364 Biotin-requiring enzyme VT48_06415 PF02780 Transketolase, C-terminal domain VT48_06415 PF02779 Transketolase, pyrimidine binding domain VT48_06420 PF02817 e3 binding domain VT48_06420 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) VT48_06420 PF00364 Biotin-requiring enzyme VT48_06425 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain VT48_06425 PF07992 Pyridine nucleotide-disulphide oxidoreductase VT48_06440 PF04198 Putative sugar-binding domain VT48_06450 PF13520 Amino acid permease VT48_06455 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily VT48_06460 PF13180 PDZ domain VT48_06465 PF03807 NADP oxidoreductase coenzyme F420-dependent VT48_06465 PF14748 Pyrroline-5-carboxylate reductase dimerisation VT48_06470 PF04951 D-aminopeptidase VT48_06475 PF00528 Binding-protein-dependent transport system inner membrane component VT48_06480 PF12911 N-terminal TM domain of oligopeptide transport permease C VT48_06480 PF00528 Binding-protein-dependent transport system inner membrane component VT48_06485 PF08352 Oligopeptide/dipeptide transporter, C-terminal region VT48_06485 PF00005 ABC transporter VT48_06490 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle VT48_06500 PF17676 LD-carboxypeptidase C-terminal domain VT48_06500 PF02016 LD-carboxypeptidase N-terminal domain VT48_06505 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain VT48_06505 PF13378 Enolase C-terminal domain-like VT48_06510 PF00877 NlpC/P60 family VT48_06515 PF08352 Oligopeptide/dipeptide transporter, C-terminal region VT48_06515 PF00005 ABC transporter VT48_06525 PF03061 Thioesterase superfamily VT48_06530 PF03551 Transcriptional regulator PadR-like family VT48_06545 PF13302 Acetyltransferase (GNAT) domain VT48_06550 PF12833 Helix-turn-helix domain VT48_06550 PF02805 Metal binding domain of Ada VT48_06550 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain VT48_06550 PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain VT48_06555 PF00893 Small Multidrug Resistance protein VT48_06560 PF00893 Small Multidrug Resistance protein VT48_06570 PF00551 Formyl transferase VT48_06570 PF01842 ACT domain VT48_06575 PF00696 Amino acid kinase family VT48_06575 PF01472 PUA domain VT48_06580 PF00171 Aldehyde dehydrogenase family VT48_06585 PF18801 response regulator aspartate phosphatase H, N terminal VT48_06595 PF02566 OsmC-like protein VT48_06600 PF01047 MarR family VT48_06605 PF02566 OsmC-like protein VT48_06610 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region VT48_06615 PF08267 Cobalamin-independent synthase, N-terminal domain VT48_06615 PF01717 Cobalamin-independent synthase, Catalytic domain VT48_06620 PF00082 Subtilase family VT48_06635 PF00486 Transcriptional regulatory protein, C terminal VT48_06635 PF00072 Response regulator receiver domain VT48_06640 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase VT48_06640 PF00672 HAMP domain VT48_06640 PF00512 His Kinase A (phospho-acceptor) domain VT48_06645 PF03413 Peptidase propeptide and YPEB domain VT48_06650 PF03413 Peptidase propeptide and YPEB domain VT48_06660 PF01769 Divalent cation transporter VT48_06660 PF00571 CBS domain VT48_06660 PF03448 MgtE intracellular N domain VT48_06670 PF03466 LysR substrate binding domain VT48_06670 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family VT48_06680 PF13411 MerR HTH family regulatory protein VT48_06695 PF01047 MarR family VT48_06700 PF03707 Bacterial signalling protein N terminal repeat VT48_06700 PF00990 Diguanylate cyclase, GGDEF domain VT48_06700 PF00563 EAL domain VT48_06705 PF09335 SNARE associated Golgi protein VT48_06710 PF03741 Integral membrane protein TerC family VT48_06715 PF04542 Sigma-70 region 2 VT48_06720 PF12791 Anti-sigma factor N-terminus VT48_06725 PF00269 Small, acid-soluble spore proteins, alpha/beta type VT48_06730 PF08876 Domain of unknown function (DUF1836) VT48_06735 PF01435 Peptidase family M48 VT48_06740 PF02386 Cation transport protein VT48_06745 PF04239 Protein of unknown function (DUF421) VT48_06755 PF01757 Acyltransferase family VT48_06760 PF00512 His Kinase A (phospho-acceptor) domain VT48_06760 PF00989 PAS fold VT48_06760 PF13188 PAS domain VT48_06760 PF13426 PAS domain VT48_06760 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase VT48_06765 PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain VT48_06765 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain VT48_06770 PF01008 Initiation factor 2 subunit family VT48_06775 PF01636 Phosphotransferase enzyme family VT48_06780 PF00155 Aminotransferase class I and II VT48_06785 PF00016 Ribulose bisphosphate carboxylase large chain, catalytic domain VT48_06785 PF02788 Ribulose bisphosphate carboxylase large chain, N-terminal domain VT48_06795 PF00596 Class II Aldolase and Adducin N-terminal domain VT48_06800 PF03079 ARD/ARD' family VT48_06805 PF09388 Spo0E like sporulation regulatory protein VT48_06810 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase VT48_06810 PF02743 Cache domain VT48_06810 PF00512 His Kinase A (phospho-acceptor) domain VT48_06815 PF01047 MarR family VT48_06820 PF00691 OmpA family VT48_06820 PF13677 Membrane MotB of proton-channel complex MotA/MotB VT48_06825 PF01618 MotA/TolQ/ExbB proton channel family VT48_06830 PF17871 AAA lid domain VT48_06830 PF00004 ATPase family associated with various cellular activities (AAA) VT48_06830 PF10431 C-terminal, D2-small domain, of ClpB protein VT48_06830 PF07724 AAA domain (Cdc48 subfamily) VT48_06840 PF06508 Queuosine biosynthesis protein QueC VT48_06845 PF01242 6-pyruvoyl tetrahydropterin synthase VT48_06850 PF04055 Radical SAM superfamily VT48_06855 PF14489 QueF-like protein VT48_06865 PF13302 Acetyltransferase (GNAT) domain VT48_06870 PF09953 Uncharacterized protein conserved in bacteria (DUF2187) VT48_06880 PF07486 Cell Wall Hydrolase VT48_06885 PF01943 Polysaccharide biosynthesis protein VT48_06890 PF00578 AhpC/TSA family VT48_06900 PF00557 Metallopeptidase family M24 VT48_06900 PF01321 Creatinase/Prolidase N-terminal domain VT48_06905 PF00356 Bacterial regulatory proteins, lacI family VT48_06905 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family VT48_06910 PF03123 CAT RNA binding domain VT48_06910 PF00874 PRD domain VT48_06915 PF02378 Phosphotransferase system, EIIC VT48_06915 PF00367 phosphotransferase system, EIIB VT48_06915 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 VT48_06920 PF00381 PTS HPr component phosphorylation site VT48_06925 PF05524 PEP-utilising enzyme, N-terminal VT48_06925 PF00391 PEP-utilising enzyme, mobile domain VT48_06925 PF02896 PEP-utilising enzyme, TIM barrel domain VT48_06930 PF11132 Transcriptional regulator protein (SplA) VT48_06940 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain VT48_06940 PF00672 HAMP domain VT48_06940 PF02743 Cache domain VT48_06945 PF00106 short chain dehydrogenase VT48_06950 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase VT48_06950 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase VT48_06955 PF00188 Cysteine-rich secretory protein family VT48_06960 PF03717 Penicillin-binding Protein dimerisation domain VT48_06960 PF00905 Penicillin binding protein transpeptidase domain VT48_06965 PF08447 PAS fold VT48_06965 PF00989 PAS fold VT48_06965 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase VT48_06965 PF00512 His Kinase A (phospho-acceptor) domain VT48_06970 PF00155 Aminotransferase class I and II VT48_06975 PF01545 Cation efflux family VT48_06975 PF16916 Dimerisation domain of Zinc Transporter VT48_06980 PF06271 RDD family VT48_06990 PF00072 Response regulator receiver domain VT48_06990 PF01584 CheW-like domain VT48_06995 PF14177 YkyB-like protein VT48_07000 PF02311 AraC-like ligand binding domain VT48_07000 PF12833 Helix-turn-helix domain VT48_07005 PF00892 EamA-like transporter family VT48_07015 PF07690 Major Facilitator Superfamily VT48_07020 PF01476 LysM domain VT48_07020 PF03734 L,D-transpeptidase catalytic domain VT48_07025 PF10518 TAT (twin-arginine translocation) pathway signal sequence VT48_07025 PF00149 Calcineurin-like phosphoesterase VT48_07035 PF10388 EAL-domain associated signalling protein domain VT48_07035 PF00563 EAL domain VT48_07040 PF05067 Manganese containing catalase VT48_07045 PF08796 Protein of unknown function (DUF1797) VT48_07050 PF04308 Ribonuclease H-like VT48_07055 PF14156 Antirepressor AbbA VT48_07065 PF03466 LysR substrate binding domain VT48_07065 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family VT48_07075 PF00258 Flavodoxin VT48_07085 PF00258 Flavodoxin VT48_07090 PF14602 Hexapeptide repeat of succinyl-transferase VT48_07090 PF08503 Tetrahydrodipicolinate succinyltransferase N-terminal VT48_07090 PF00132 Bacterial transferase hexapeptide (six repeats) VT48_07095 PF01546 Peptidase family M20/M25/M40 VT48_07095 PF07687 Peptidase dimerisation domain VT48_07100 PF03698 Uncharacterised protein family (UPF0180) VT48_07105 PF00924 Mechanosensitive ion channel VT48_07110 PF00578 AhpC/TSA family VT48_07110 PF10417 C-terminal domain of 1-Cys peroxiredoxin VT48_07115 PF00578 AhpC/TSA family VT48_07130 PF12804 MobA-like NTP transferase domain VT48_07135 PF00899 ThiF family VT48_07140 PF03453 MoeA N-terminal region (domain I and II) VT48_07140 PF03454 MoeA C-terminal region (domain IV) VT48_07140 PF00994 Probable molybdopterin binding domain VT48_07145 PF03205 Molybdopterin guanine dinucleotide synthesis protein B VT48_07150 PF02391 MoaE protein VT48_07155 PF02597 ThiS family VT48_07170 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion VT48_07175 PF00005 ABC transporter VT48_07180 PF12704 MacB-like periplasmic core domain VT48_07180 PF02687 FtsX-like permease family VT48_07185 PF00455 DeoR C terminal sensor domain VT48_07185 PF08220 DeoR-like helix-turn-helix domain VT48_07190 PF00294 pfkB family carbohydrate kinase VT48_07195 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 VT48_07195 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit VT48_07200 PF10502 Signal peptidase, peptidase S26 VT48_07210 PF00005 ABC transporter VT48_07210 PF12848 ABC transporter VT48_07215 PF02073 Thermophilic metalloprotease (M29) VT48_07225 PF18277 AbrB C-terminal domain VT48_07225 PF04014 Antidote-toxin recognition MazE, bacterial antitoxin VT48_07230 PF00989 PAS fold VT48_07230 PF00512 His Kinase A (phospho-acceptor) domain VT48_07230 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase VT48_07235 PF06094 Gamma-glutamyl cyclotransferase, AIG2-like VT48_07240 PF02080 TrkA-C domain VT48_07240 PF02254 TrkA-N domain VT48_07245 PF01979 Amidohydrolase family VT48_07245 PF13382 Adenine deaminase C-terminal domain VT48_07250 PF07521 Zn-dependent metallo-hydrolase RNA specificity domain VT48_07250 PF17770 Ribonuclease J C-terminal domain VT48_07250 PF00753 Metallo-beta-lactamase superfamily VT48_07265 PF01327 Polypeptide deformylase VT48_07280 PF00676 Dehydrogenase E1 component VT48_07285 PF02780 Transketolase, C-terminal domain VT48_07285 PF02779 Transketolase, pyrimidine binding domain VT48_07290 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) VT48_07290 PF00364 Biotin-requiring enzyme VT48_07290 PF02817 e3 binding domain VT48_07295 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain VT48_07295 PF07992 Pyridine nucleotide-disulphide oxidoreductase VT48_07305 PF01276 Orn/Lys/Arg decarboxylase, major domain VT48_07305 PF03711 Orn/Lys/Arg decarboxylase, C-terminal domain VT48_07310 PF05256 Uncharacterised protein family (UPF0223) VT48_07315 PF06335 Protein of unknown function (DUF1054) VT48_07325 PF00459 Inositol monophosphatase family VT48_07340 PF08281 Sigma-70, region 4 VT48_07340 PF04542 Sigma-70 region 2 VT48_07345 PF13490 Putative zinc-finger VT48_07365 PF14036 YlaH-like protein VT48_07370 PF09963 Uncharacterized protein conserved in bacteria (DUF2197) VT48_07375 PF09580 Sporulation lipoprotein YhcN/YlaJ (Spore_YhcN_YlaJ) VT48_07380 PF02562 PhoH-like protein VT48_07380 PF13638 PIN domain VT48_07390 PF04960 Glutaminase VT48_07395 PF07408 Protein of unknown function (DUF1507) VT48_07400 PF01098 Cell cycle protein VT48_07405 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain VT48_07405 PF00364 Biotin-requiring enzyme VT48_07405 PF02785 Biotin carboxylase C-terminal domain VT48_07405 PF00682 HMGL-like VT48_07405 PF00289 Biotin carboxylase, N-terminal domain VT48_07405 PF02436 Conserved carboxylase domain VT48_07415 PF02628 Cytochrome oxidase assembly protein VT48_07420 PF01040 UbiA prenyltransferase family VT48_07425 PF00116 Cytochrome C oxidase subunit II, periplasmic domain VT48_07425 PF00034 Cytochrome c VT48_07425 PF02790 Cytochrome C oxidase subunit II, transmembrane domain VT48_07430 PF00115 Cytochrome C and Quinol oxidase polypeptide I VT48_07435 PF00510 Cytochrome c oxidase subunit III VT48_07440 PF03626 Prokaryotic Cytochrome C oxidase subunit IV VT48_07445 PF09678 Cytochrome c oxidase caa3 assembly factor (Caa3_CtaG) VT48_07450 PF08868 YugN-like family VT48_07455 PF00571 CBS domain VT48_07460 PF00188 Cysteine-rich secretory protein family VT48_07460 PF14504 CAP-associated N-terminal VT48_07465 PF14071 Putative coat protein VT48_07470 PF14003 YlbE-like protein VT48_07480 PF06133 Control of competence regulator ComK, YlbF/YmcA VT48_07485 PF09902 Uncharacterized protein conserved in bacteria (DUF2129) VT48_07495 PF01467 Cytidylyltransferase-like VT48_07500 PF07670 Nucleoside recognition VT48_07505 PF01734 Patatin-like phospholipase VT48_07510 PF13180 PDZ domain VT48_07510 PF05362 Lon protease (S16) C-terminal proteolytic domain VT48_07515 PF05636 HIGH Nucleotidyl Transferase VT48_07520 PF02620 Large ribosomal RNA subunit accumulation protein YceD VT48_07525 PF01783 Ribosomal L32p protein family VT48_07535 PF00583 Acetyltransferase (GNAT) family VT48_07540 PF02558 Ketopantoate reductase PanE/ApbA VT48_07540 PF08546 Ketopantoate reductase PanE/ApbA C terminal VT48_07545 PF10079 Bacillithiol biosynthesis BshC VT48_07550 PF02381 MraZ protein, putative antitoxin-like VT48_07555 PF01795 MraW methylase family VT48_07570 PF03793 PASTA domain VT48_07570 PF00905 Penicillin binding protein transpeptidase domain VT48_07570 PF03717 Penicillin-binding Protein dimerisation domain VT48_07575 PF02875 Mur ligase family, glutamate ligase domain VT48_07575 PF01225 Mur ligase family, catalytic domain VT48_07575 PF08245 Mur ligase middle domain VT48_07580 PF00953 Glycosyl transferase family 4 VT48_07580 PF10555 Phospho-N-acetylmuramoyl-pentapeptide-transferase signature 1 VT48_07585 PF02875 Mur ligase family, glutamate ligase domain VT48_07585 PF08245 Mur ligase middle domain VT48_07590 PF01098 Cell cycle protein VT48_07595 PF04101 Glycosyltransferase family 28 C-terminal domain VT48_07595 PF03033 Glycosyltransferase family 28 N-terminal domain VT48_07600 PF02873 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain VT48_07600 PF01565 FAD binding domain VT48_07605 PF08478 POTRA domain, FtsQ-type VT48_07610 PF05949 Bacterial protein of unknown function (DUF881) VT48_07615 PF05949 Bacterial protein of unknown function (DUF881) VT48_07620 PF06947 Protein of unknown function (DUF1290) VT48_07625 PF02491 SHS2 domain inserted in FTSA VT48_07630 PF12327 FtsZ family, C-terminal domain VT48_07630 PF00091 Tubulin/FtsZ family, GTPase domain VT48_07635 PF00082 Subtilase family VT48_07635 PF05922 Peptidase inhibitor I9 VT48_07640 PF03419 Sporulation factor SpoIIGA VT48_07645 PF04542 Sigma-70 region 2 VT48_07645 PF04545 Sigma-70, region 4 VT48_07650 PF04539 Sigma-70 region 3 VT48_07650 PF04545 Sigma-70, region 4 VT48_07650 PF04542 Sigma-70 region 2 VT48_07655 PF04198 Putative sugar-binding domain VT48_07670 PF03608 PTS system enzyme II sorbitol-specific factor VT48_07675 PF03612 Sorbitol phosphotransferase enzyme II N-terminus VT48_07675 PF07663 Sorbitol phosphotransferase enzyme II C-terminus VT48_07680 PF03829 PTS system glucitol/sorbitol-specific IIA component VT48_07685 PF00005 ABC transporter VT48_07690 PF05239 PRC-barrel domain VT48_07700 PF01168 Alanine racemase, N-terminal domain VT48_07705 PF04472 Cell division protein SepF VT48_07710 PF02325 YGGT family VT48_07715 PF17774 Putative RNA-binding domain in YlmH VT48_07715 PF01479 S4 domain VT48_07720 PF05103 DivIVA protein VT48_07725 PF08264 Anticodon-binding domain of tRNA VT48_07725 PF00133 tRNA synthetases class I (I, L, M and V) VT48_07730 PF01258 Prokaryotic dksA/traR C4-type zinc finger VT48_07735 PF01252 Signal peptidase (SPase) II VT48_07740 PF00849 RNA pseudouridylate synthase VT48_07740 PF01479 S4 domain VT48_07745 PF00156 Phosphoribosyl transferase domain VT48_07750 PF00860 Permease family VT48_07755 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain VT48_07755 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain VT48_07760 PF01979 Amidohydrolase family VT48_07765 PF00988 Carbamoyl-phosphate synthase small chain, CPSase domain VT48_07765 PF00117 Glutamine amidotransferase class-I VT48_07770 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain VT48_07770 PF02787 Carbamoyl-phosphate synthetase large chain, oligomerisation domain VT48_07770 PF02142 MGS-like domain VT48_07775 PF10418 Iron-sulfur cluster binding domain of dihydroorotate dehydrogenase B VT48_07780 PF01180 Dihydroorotate dehydrogenase VT48_07785 PF00215 Orotidine 5'-phosphate decarboxylase / HUMPS family VT48_07790 PF00156 Phosphoribosyl transferase domain VT48_07795 PF01507 Phosphoadenosine phosphosulfate reductase family VT48_07800 PF01384 Phosphate transporter family VT48_07805 PF14306 PUA-like domain VT48_07805 PF01747 ATP-sulfurylase VT48_07815 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases VT48_07820 PF01903 CbiX VT48_07835 PF00690 Cation transporter/ATPase, N-terminus VT48_07835 PF00689 Cation transporting ATPase, C-terminus VT48_07840 PF08340 Domain of unknown function (DUF1732) VT48_07840 PF03755 YicC-like family, N-terminal region VT48_07845 PF04025 Domain of unknown function (DUF370) VT48_07850 PF00625 Guanylate kinase VT48_07855 PF01192 RNA polymerase Rpb6 VT48_07860 PF04127 DNA / pantothenate metabolism flavoprotein VT48_07860 PF02441 Flavoprotein VT48_07865 PF04851 Type III restriction enzyme, res subunit VT48_07865 PF18319 PriA DNA helicase Cys-rich region (CRR) domain VT48_07865 PF18074 Primosomal protein N C-terminal domain VT48_07865 PF17764 3′ DNA-binding domain (3′BD) VT48_07865 PF00271 Helicase conserved C-terminal domain VT48_07870 PF01327 Polypeptide deformylase VT48_07875 PF02911 Formyl transferase, C-terminal domain VT48_07875 PF00551 Formyl transferase VT48_07880 PF01029 NusB family VT48_07880 PF01189 16S rRNA methyltransferase RsmB/F VT48_07885 PF04055 Radical SAM superfamily VT48_07895 PF03793 PASTA domain VT48_07895 PF00069 Protein kinase domain VT48_07900 PF03193 RsgA GTPase VT48_07900 PF16745 RsgA N-terminal domain VT48_07905 PF00834 Ribulose-phosphate 3 epimerase family VT48_07910 PF04265 Thiamin pyrophosphokinase, vitamin B1 binding domain VT48_07910 PF04263 Thiamin pyrophosphokinase, catalytic domain VT48_07915 PF08183 Stage V sporulation protein family VT48_07920 PF00830 Ribosomal L28 family VT48_07925 PF03780 Asp23 family, cell envelope-related function VT48_07930 PF13684 Dihydroxyacetone kinase family VT48_07930 PF02734 DAK2 domain VT48_07935 PF03315 Serine dehydratase beta chain VT48_07935 PF01842 ACT domain VT48_07940 PF03313 Serine dehydratase alpha chain VT48_07945 PF00271 Helicase conserved C-terminal domain VT48_07945 PF17191 RecG wedge domain VT48_07945 PF00270 DEAD/DEAH box helicase VT48_07955 PF02504 Fatty acid synthesis protein VT48_07960 PF00698 Acyl transferase domain VT48_07970 PF00550 Phosphopantetheine attachment site VT48_07975 PF14622 Ribonuclease-III-like VT48_07975 PF00035 Double-stranded RNA binding motif VT48_07980 PF02463 RecF/RecN/SMC N terminal domain VT48_07980 PF06470 SMC proteins Flexible Hinge Domain VT48_07985 PF02881 SRP54-type protein, helical bundle domain VT48_07985 PF00448 SRP54-type protein, GTPase domain VT48_07990 PF04297 Putative helix-turn-helix protein, YlxM / p13 like VT48_07995 PF02881 SRP54-type protein, helical bundle domain VT48_07995 PF00448 SRP54-type protein, GTPase domain VT48_07995 PF02978 Signal peptide binding domain VT48_08000 PF00886 Ribosomal protein S16 VT48_08010 PF11068 YlqD protein VT48_08015 PF01782 RimM N-terminal domain VT48_08015 PF05239 PRC-barrel domain VT48_08020 PF01746 tRNA (Guanine-1)-methyltransferase VT48_08025 PF01245 Ribosomal protein L19 VT48_08030 PF01926 50S ribosome-binding GTPase VT48_08035 PF01351 Ribonuclease HII VT48_08045 PF01312 FlhB HrpN YscU SpaS Family VT48_08050 PF00549 CoA-ligase VT48_08050 PF08442 ATP-grasp domain VT48_08055 PF02629 CoA binding domain VT48_08055 PF00549 CoA-ligase VT48_08060 PF02481 DNA recombination-mediator protein A VT48_08065 PF01131 DNA topoisomerase VT48_08065 PF01396 Topoisomerase DNA binding C4 zinc finger VT48_08065 PF01751 Toprim domain VT48_08070 PF01134 Glucose inhibited division protein A VT48_08075 PF02899 Phage integrase, N-terminal SAM-like domain VT48_08075 PF00589 Phage integrase family VT48_08080 PF00227 Proteasome subunit VT48_08085 PF07724 AAA domain (Cdc48 subfamily) VT48_08085 PF00004 ATPase family associated with various cellular activities (AAA) VT48_08085 PF10431 C-terminal, D2-small domain, of ClpB protein VT48_08090 PF08222 CodY helix-turn-helix domain VT48_08090 PF06018 CodY GAF-like domain VT48_08095 PF00460 Flagella basal body rod protein VT48_08100 PF00460 Flagella basal body rod protein VT48_08100 PF06429 Flagellar basal body rod FlgEFG protein C-terminal VT48_08105 PF02049 Flagellar hook-basal body complex protein FliE VT48_08110 PF08345 Flagellar M-ring protein C-terminal VT48_08110 PF01514 Secretory protein of YscJ/FliF family VT48_08115 PF14841 FliG middle domain VT48_08115 PF01706 FliG C-terminal domain VT48_08115 PF14842 FliG N-terminal domain VT48_08120 PF02108 Flagellar assembly protein FliH VT48_08125 PF02874 ATP synthase alpha/beta family, beta-barrel domain VT48_08125 PF18269 T3SS EscN ATPase C-terminal domain VT48_08125 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain VT48_08130 PF02050 Flagellar FliJ protein VT48_08135 PF03448 MgtE intracellular N domain VT48_08140 PF02120 Flagellar hook-length control protein FliK VT48_08145 PF03963 Flagellar hook capping protein - N-terminal region VT48_08150 PF00460 Flagella basal body rod protein VT48_08150 PF06429 Flagellar basal body rod FlgEFG protein C-terminal VT48_08155 PF06289 Flagellar and Swarming motility proteins VT48_08160 PF03748 Flagellar basal body-associated protein FliL VT48_08165 PF02154 Flagellar motor switch protein FliM VT48_08165 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term VT48_08170 PF04509 CheC-like family VT48_08170 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term VT48_08175 PF00072 Response regulator receiver domain VT48_08180 PF04347 Flagellar biosynthesis protein, FliO VT48_08185 PF00813 FliP family VT48_08190 PF01313 Bacterial export proteins, family 3 VT48_08195 PF01311 Bacterial export proteins, family 1 VT48_08200 PF01312 FlhB HrpN YscU SpaS Family VT48_08205 PF00771 FHIPEP family VT48_08210 PF00448 SRP54-type protein, GTPase domain VT48_08215 PF10609 NUBPL iron-transfer P-loop NTPase VT48_08220 PF01339 CheB methylesterase VT48_08220 PF00072 Response regulator receiver domain VT48_08225 PF07194 P2 response regulator binding domain VT48_08225 PF01584 CheW-like domain VT48_08225 PF01627 Hpt domain VT48_08225 PF02895 Signal transducing histidine kinase, homodimeric domain VT48_08225 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase VT48_08230 PF01584 CheW-like domain VT48_08235 PF04509 CheC-like family VT48_08240 PF03975 CheD chemotactic sensory transduction VT48_08245 PF04542 Sigma-70 region 2 VT48_08245 PF04545 Sigma-70, region 4 VT48_08245 PF04539 Sigma-70 region 3 VT48_08255 PF00318 Ribosomal protein S2 VT48_08260 PF00889 Elongation factor TS VT48_08265 PF00696 Amino acid kinase family VT48_08270 PF01765 Ribosome recycling factor VT48_08275 PF01255 Putative undecaprenyl diphosphate synthase VT48_08285 PF02670 1-deoxy-D-xylulose 5-phosphate reductoisomerase VT48_08285 PF08436 1-deoxy-D-xylulose 5-phosphate reductoisomerase C-terminal domain VT48_08285 PF13288 DXP reductoisomerase C-terminal domain VT48_08290 PF17820 PDZ domain VT48_08290 PF02163 Peptidase family M50 VT48_08295 PF03129 Anticodon binding domain VT48_08295 PF04073 Aminoacyl-tRNA editing domain VT48_08295 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) VT48_08300 PF11490 DNA polymerase III polC-type N-terminus II VT48_08300 PF17657 Bacterial DNA polymerase III alpha subunit finger domain VT48_08300 PF00929 Exonuclease VT48_08300 PF07733 Bacterial DNA polymerase III alpha NTPase domain VT48_08300 PF14579 Helix-hairpin-helix motif VT48_08300 PF02811 PHP domain VT48_08300 PF14480 DNA polymerase III polC-type N-terminus I VT48_08305 PF00942 Cellulose binding domain VT48_08305 PF00759 Glycosyl hydrolase family 9 VT48_08310 PF02011 Glycosyl hydrolase family 48 VT48_08310 PF00759 Glycosyl hydrolase family 9 VT48_08310 PF00942 Cellulose binding domain VT48_08325 PF17384 RimP C-terminal SH3 domain VT48_08325 PF02576 RimP N-terminal domain VT48_08330 PF00575 S1 RNA binding domain VT48_08330 PF13184 NusA-like KH domain VT48_08330 PF08529 NusA N-terminal domain VT48_08335 PF04296 Protein of unknown function (DUF448) VT48_08340 PF01248 Ribosomal protein L7Ae/L30e/S12e/Gadd45 family VT48_08345 PF11987 Translation-initiation factor 2 VT48_08345 PF00009 Elongation factor Tu GTP binding domain VT48_08345 PF04760 Translation initiation factor IF-2, N-terminal region VT48_08350 PF04456 Protein of unknown function (DUF503) VT48_08355 PF02033 Ribosome-binding factor A VT48_08360 PF16198 tRNA pseudouridylate synthase B C-terminal domain VT48_08360 PF01509 TruB family pseudouridylate synthase (N terminal domain) VT48_08365 PF01687 Riboflavin kinase VT48_08365 PF06574 FAD synthetase VT48_08370 PF00312 Ribosomal protein S15 VT48_08375 PF03725 3' exoribonuclease family, domain 2 VT48_08375 PF01138 3' exoribonuclease family, domain 1 VT48_08375 PF03726 Polyribonucleotide nucleotidyltransferase, RNA binding domain VT48_08375 PF00575 S1 RNA binding domain VT48_08375 PF00013 KH domain VT48_08380 PF01522 Polysaccharide deacetylase VT48_08385 PF00675 Insulinase (Peptidase family M16) VT48_08385 PF05193 Peptidase M16 inactive domain VT48_08395 PF05239 PRC-barrel domain VT48_08400 PF01262 Alanine dehydrogenase/PNT, C-terminal domain VT48_08400 PF16924 Dipicolinate synthase subunit A N-terminal domain VT48_08405 PF02441 Flavoprotein VT48_08410 PF01118 Semialdehyde dehydrogenase, NAD binding domain VT48_08410 PF02774 Semialdehyde dehydrogenase, dimerisation domain VT48_08415 PF00696 Amino acid kinase family VT48_08415 PF13840 ACT domain VT48_08420 PF00701 Dihydrodipicolinate synthetase family VT48_08425 PF17770 Ribonuclease J C-terminal domain VT48_08425 PF00753 Metallo-beta-lactamase superfamily VT48_08425 PF07521 Zn-dependent metallo-hydrolase RNA specificity domain VT48_08430 PF00574 Clp protease VT48_08435 PF14035 YlzJ-like protein VT48_08440 PF09397 Ftsk gamma domain VT48_08440 PF17854 FtsK alpha domain VT48_08440 PF01580 FtsK/SpoIIIE family VT48_08445 PF00392 Bacterial regulatory proteins, gntR family VT48_08445 PF07702 UTRA domain VT48_08450 PF07690 Major Facilitator Superfamily VT48_08455 PF03176 MMPL family VT48_08460 PF05193 Peptidase M16 inactive domain VT48_08465 PF05193 Peptidase M16 inactive domain VT48_08465 PF00675 Insulinase (Peptidase family M16) VT48_08475 PF03176 MMPL family VT48_08485 PF11588 Protein of unknown function (DUF3243) VT48_08490 PF11868 Protein of unknown function (DUF3388) VT48_08495 PF13464 Domain of unknown function (DUF4115) VT48_08500 PF01066 CDP-alcohol phosphatidyltransferase VT48_08505 PF02464 Competence-damaged protein VT48_08505 PF00994 Probable molybdopterin binding domain VT48_08505 PF18146 Damage-inducible protein CinA KH domain VT48_08510 PF00154 recA bacterial DNA recombination protein VT48_08515 PF00013 KH domain VT48_08515 PF01966 HD domain VT48_08515 PF12072 Domain of unknown function (DUF3552) VT48_08520 PF13277 YmdB-like protein VT48_08525 PF04232 Stage V sporulation protein S (SpoVS) VT48_08530 PF00873 AcrB/AcrD/AcrF family VT48_08535 PF08240 Alcohol dehydrogenase GroES-like domain VT48_08535 PF00107 Zinc-binding dehydrogenase VT48_08540 PF00155 Aminotransferase class I and II VT48_08545 PF04055 Radical SAM superfamily VT48_08545 PF00919 Uncharacterized protein family UPF0004 VT48_08545 PF01938 TRAM domain VT48_08550 PF06133 Control of competence regulator ComK, YlbF/YmcA VT48_08555 PF10628 Outer spore coat protein E (CotE) VT48_08560 PF01624 MutS domain I VT48_08560 PF05188 MutS domain II VT48_08560 PF05192 MutS domain III VT48_08560 PF05190 MutS family domain IV VT48_08560 PF00488 MutS domain V VT48_08565 PF01119 DNA mismatch repair protein, C-terminal domain VT48_08565 PF08676 MutL C terminal dimerisation domain VT48_08570 PF17735 Biofilm surface layer A VT48_08585 PF02559 CarD-like/TRCF domain VT48_08590 PF05908 Poly-gamma-glutamate hydrolase VT48_08595 PF18801 response regulator aspartate phosphatase H, N terminal VT48_08600 PF00082 Subtilase family VT48_08605 PF05908 Poly-gamma-glutamate hydrolase VT48_08610 PF02566 OsmC-like protein VT48_08615 PF00893 Small Multidrug Resistance protein VT48_08620 PF00893 Small Multidrug Resistance protein VT48_08635 PF12788 YmaF family VT48_08645 PF17209 Hfq protein VT48_08660 PF07972 NrdI Flavodoxin like VT48_08665 PF00317 Ribonucleotide reductase, all-alpha domain VT48_08665 PF02867 Ribonucleotide reductase, barrel domain VT48_08665 PF08343 Ribonucleotide reductase N-terminal VT48_08670 PF00268 Ribonucleotide reductase, small chain VT48_08680 PF01520 N-acetylmuramoyl-L-alanine amidase VT48_08680 PF05036 Sporulation related domain VT48_08685 PF17866 AAA lid domain VT48_08685 PF00004 ATPase family associated with various cellular activities (AAA) VT48_08690 PF01926 50S ribosome-binding GTPase VT48_08690 PF13167 GTP-binding GTPase N-terminal VT48_08690 PF16360 GTP-binding GTPase Middle Region VT48_08695 PF06838 Methionine gamma-lyase VT48_08700 PF13411 MerR HTH family regulatory protein VT48_08705 PF00120 Glutamine synthetase, catalytic domain VT48_08705 PF03951 Glutamine synthetase, beta-Grasp domain VT48_08710 PF00082 Subtilase family VT48_08730 PF18801 response regulator aspartate phosphatase H, N terminal VT48_08745 PF08240 Alcohol dehydrogenase GroES-like domain VT48_08745 PF00107 Zinc-binding dehydrogenase VT48_08760 PF04740 LXG domain of WXG superfamily VT48_08765 PF04634 Protein of unknown function, DUF600 VT48_08780 PF01569 PAP2 superfamily VT48_08785 PF08818 Domain of unknown function (DU1801) VT48_08810 PF18801 response regulator aspartate phosphatase H, N terminal VT48_08820 PF06912 Protein of unknown function (DUF1275) VT48_08825 PF01068 ATP dependent DNA ligase domain VT48_08830 PF02735 Ku70/Ku80 beta-barrel domain VT48_08835 PF09954 Uncharacterized protein conserved in bacteria (DUF2188) VT48_08845 PF02082 Transcriptional regulator VT48_08850 PF05368 NmrA-like family VT48_08860 PF02754 Cysteine-rich domain VT48_08865 PF02589 LUD domain VT48_08865 PF11870 Domain of unknown function (DUF3390) VT48_08865 PF13183 4Fe-4S dicluster domain VT48_08870 PF02589 LUD domain VT48_08885 PF04239 Protein of unknown function (DUF421) VT48_08890 PF00440 Bacterial regulatory proteins, tetR family VT48_08890 PF16295 Tetracyclin repressor-like, C-terminal domain VT48_08895 PF00667 FAD binding domain VT48_08895 PF00175 Oxidoreductase NAD-binding domain VT48_08895 PF00067 Cytochrome P450 VT48_08895 PF00258 Flavodoxin VT48_08900 PF00089 Trypsin VT48_08905 PF13231 Dolichyl-phosphate-mannose-protein mannosyltransferase VT48_08910 PF14040 Deoxyribonuclease NucA/NucB VT48_08915 PF01740 STAS domain VT48_08920 PF16800 IseA DL-endopeptidase inhibitor VT48_08930 PF00717 Peptidase S24-like VT48_08930 PF01726 LexA DNA binding domain VT48_08935 PF01476 LysM domain VT48_08940 PF00239 Resolvase, N terminal domain VT48_08945 PF05979 Bacterial protein of unknown function (DUF896) VT48_08950 PF02780 Transketolase, C-terminal domain VT48_08950 PF02779 Transketolase, pyrimidine binding domain VT48_08950 PF00456 Transketolase, thiamine diphosphate binding domain VT48_08955 PF10747 Sporulation inhibitor of replication protein SirA VT48_08960 PF03672 Uncharacterised protein family (UPF0154) VT48_08965 PF09388 Spo0E like sporulation regulatory protein VT48_08970 PF02683 Cytochrome C biogenesis protein transmembrane region VT48_08975 PF07301 Protein of unknown function (DUF1453) VT48_08980 PF11084 Protein of unknown function (DUF2621) VT48_08990 PF08179 Small acid-soluble spore protein P family VT48_09000 PF00694 Aconitase C-terminal domain VT48_09000 PF00330 Aconitase family (aconitate hydratase) VT48_09005 PF00578 AhpC/TSA family VT48_09010 PF08177 Small acid-soluble spore protein N family VT48_09020 PF03061 Thioesterase superfamily VT48_09030 PF01521 Iron-sulphur cluster biosynthesis VT48_09035 PF02660 Glycerol-3-phosphate acyltransferase VT48_09040 PF13380 CoA binding domain VT48_09045 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase VT48_09045 PF01751 Toprim domain VT48_09045 PF00204 DNA gyrase B VT48_09045 PF00986 DNA gyrase B subunit, carboxyl terminus VT48_09050 PF00521 DNA gyrase/topoisomerase IV, subunit A VT48_09050 PF03989 DNA gyrase C-terminal domain, beta-propeller VT48_09060 PF07690 Major Facilitator Superfamily VT48_09065 PF00180 Isocitrate/isopropylmalate dehydrogenase VT48_09070 PF14602 Hexapeptide repeat of succinyl-transferase VT48_09070 PF12464 Maltose acetyltransferase VT48_09075 PF01451 Low molecular weight phosphotyrosine protein phosphatase VT48_09080 PF02040 Arsenical pump membrane protein VT48_09085 PF01022 Bacterial regulatory protein, arsR family VT48_09095 PF01323 DSBA-like thioredoxin domain VT48_09100 PF02525 Flavodoxin-like fold VT48_09110 PF00440 Bacterial regulatory proteins, tetR family VT48_09115 PF02525 Flavodoxin-like fold VT48_09120 PF01638 HxlR-like helix-turn-helix VT48_09130 PF00291 Pyridoxal-phosphate dependent enzyme VT48_09135 PF01042 Endoribonuclease L-PSP VT48_09150 PF01494 FAD binding domain VT48_09165 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region VT48_09170 PF00934 PE family VT48_09170 PF07859 alpha/beta hydrolase fold VT48_09175 PF13411 MerR HTH family regulatory protein VT48_09180 PF00232 Glycosyl hydrolase family 1 VT48_09185 PF02378 Phosphotransferase system, EIIC VT48_09185 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 VT48_09185 PF00367 phosphotransferase system, EIIB VT48_09190 PF03123 CAT RNA binding domain VT48_09190 PF00874 PRD domain VT48_09200 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase VT48_09200 PF00512 His Kinase A (phospho-acceptor) domain VT48_09205 PF00486 Transcriptional regulatory protein, C terminal VT48_09205 PF00072 Response regulator receiver domain VT48_09210 PF17189 Glycosyl hydrolase family 30 beta sandwich domain VT48_09210 PF02055 Glycosyl hydrolase family 30 TIM-barrel domain VT48_09215 PF03422 Carbohydrate binding module (family 6) VT48_09215 PF04616 Glycosyl hydrolases family 43 VT48_09220 PF00171 Aldehyde dehydrogenase family VT48_09225 PF11975 Family 4 glycosyl hydrolase C-terminal domain VT48_09225 PF02056 Family 4 glycosyl hydrolase VT48_09250 PF00834 Ribulose-phosphate 3 epimerase family VT48_09265 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 VT48_09275 PF00583 Acetyltransferase (GNAT) family VT48_09280 PF00392 Bacterial regulatory proteins, gntR family VT48_09280 PF00155 Aminotransferase class I and II VT48_09290 PF01047 MarR family VT48_09295 PF07690 Major Facilitator Superfamily VT48_09300 PF01116 Fructose-bisphosphate aldolase class-II VT48_09305 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit VT48_09305 PF02378 Phosphotransferase system, EIIC VT48_09305 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 VT48_09310 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 VT48_09310 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit VT48_09315 PF00294 pfkB family carbohydrate kinase VT48_09320 PF01418 Helix-turn-helix domain, rpiR family VT48_09320 PF01380 SIS domain VT48_09325 PF13091 PLD-like domain VT48_09345 PF00171 Aldehyde dehydrogenase family VT48_09350 PF00667 FAD binding domain VT48_09350 PF00258 Flavodoxin VT48_09350 PF00175 Oxidoreductase NAD-binding domain VT48_09355 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain VT48_09355 PF01077 Nitrite and sulphite reductase 4Fe-4S domain VT48_09360 PF13193 AMP-binding enzyme C-terminal domain VT48_09360 PF00501 AMP-binding enzyme VT48_09360 PF16177 Acetyl-coenzyme A synthetase N-terminus VT48_09365 PF01039 Carboxyl transferase domain VT48_09370 PF00378 Enoyl-CoA hydratase/isomerase VT48_09375 PF00682 HMGL-like VT48_09380 PF00364 Biotin-requiring enzyme VT48_09385 PF00289 Biotin carboxylase, N-terminal domain VT48_09385 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain VT48_09385 PF02785 Biotin carboxylase C-terminal domain VT48_09390 PF00501 AMP-binding enzyme VT48_09390 PF13193 AMP-binding enzyme C-terminal domain VT48_09395 PF00441 Acyl-CoA dehydrogenase, C-terminal domain VT48_09395 PF02770 Acyl-CoA dehydrogenase, middle domain VT48_09395 PF02771 Acyl-CoA dehydrogenase, N-terminal domain VT48_09400 PF02638 Glycosyl hydrolase-like 10 VT48_09410 PF00455 DeoR C terminal sensor domain VT48_09410 PF08220 DeoR-like helix-turn-helix domain VT48_09415 PF14552 Tautomerase enzyme VT48_09425 PF17853 GGDEF-like domain VT48_09425 PF13556 PucR C-terminal helix-turn-helix domain VT48_09425 PF05651 Putative sugar diacid recognition VT48_09430 PF02913 FAD linked oxidases, C-terminal domain VT48_09430 PF01565 FAD binding domain VT48_09435 PF13183 4Fe-4S dicluster domain VT48_09435 PF02754 Cysteine-rich domain VT48_09440 PF03323 Bacillus/Clostridium GerA spore germination protein VT48_09445 PF03845 Spore germination protein VT48_09455 PF12728 Helix-turn-helix domain VT48_09460 PF04138 GtrA-like protein VT48_09465 PF00483 Nucleotidyl transferase VT48_09470 PF09335 SNARE associated Golgi protein VT48_09475 PF02602 Uroporphyrinogen-III synthase HemD VT48_09485 PF00296 Luciferase-like monooxygenase VT48_09500 PF01554 MatE VT48_09505 PF02113 D-Ala-D-Ala carboxypeptidase 3 (S13) family VT48_09510 PF01095 Pectinesterase VT48_09515 PF04239 Protein of unknown function (DUF421) VT48_09520 PF00355 Rieske [2Fe-2S] domain VT48_09525 PF04324 BFD-like [2Fe-2S] binding domain VT48_09525 PF01077 Nitrite and sulphite reductase 4Fe-4S domain VT48_09525 PF07992 Pyridine nucleotide-disulphide oxidoreductase VT48_09525 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain VT48_09525 PF18267 Rubredoxin NAD+ reductase C-terminal domain VT48_09530 PF00384 Molybdopterin oxidoreductase VT48_09530 PF01568 Molydopterin dinucleotide binding domain VT48_09530 PF04879 Molybdopterin oxidoreductase Fe4S4 domain VT48_09535 PF04324 BFD-like [2Fe-2S] binding domain VT48_09535 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain VT48_09535 PF07992 Pyridine nucleotide-disulphide oxidoreductase VT48_09535 PF18267 Rubredoxin NAD+ reductase C-terminal domain VT48_09540 PF07690 Major Facilitator Superfamily VT48_09545 PF07992 Pyridine nucleotide-disulphide oxidoreductase VT48_09545 PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster VT48_09550 PF00310 Glutamine amidotransferases class-II VT48_09550 PF01493 GXGXG motif VT48_09550 PF01645 Conserved region in glutamate synthase VT48_09550 PF04898 Glutamate synthase central domain VT48_09555 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family VT48_09555 PF03466 LysR substrate binding domain VT48_09560 PF00005 ABC transporter VT48_09560 PF00664 ABC transporter transmembrane region VT48_09565 PF00005 ABC transporter VT48_09565 PF00664 ABC transporter transmembrane region VT48_09570 PF06445 GyrI-like small molecule binding domain VT48_09570 PF13411 MerR HTH family regulatory protein VT48_09575 PF00583 Acetyltransferase (GNAT) family VT48_09580 PF00171 Aldehyde dehydrogenase family VT48_09585 PF01472 PUA domain VT48_09585 PF00696 Amino acid kinase family VT48_09590 PF14748 Pyrroline-5-carboxylate reductase dimerisation VT48_09590 PF03807 NADP oxidoreductase coenzyme F420-dependent VT48_09595 PF00067 Cytochrome P450 VT48_09600 PF01568 Molydopterin dinucleotide binding domain VT48_09600 PF00384 Molybdopterin oxidoreductase VT48_09600 PF04879 Molybdopterin oxidoreductase Fe4S4 domain VT48_09605 PF00457 Glycosyl hydrolases family 11 VT48_09610 PF00370 FGGY family of carbohydrate kinases, N-terminal domain VT48_09610 PF02782 FGGY family of carbohydrate kinases, C-terminal domain VT48_09615 PF01261 Xylose isomerase-like TIM barrel VT48_09620 PF00480 ROK family VT48_09625 PF04616 Glycosyl hydrolases family 43 VT48_09625 PF17851 Beta xylosidase C-terminal Concanavalin A-like domain VT48_09635 PF01588 Putative tRNA binding domain VT48_09645 PF14158 YndJ-like protein VT48_09650 PF13761 Domain of unknown function (DUF4166) VT48_09660 PF13305 Tetracyclin repressor-like, C-terminal domain VT48_09660 PF00440 Bacterial regulatory proteins, tetR family VT48_09665 PF00753 Metallo-beta-lactamase superfamily VT48_09670 PF06445 GyrI-like small molecule binding domain VT48_09675 PF08279 HTH domain VT48_09675 PF13280 WYL domain VT48_09685 PF01022 Bacterial regulatory protein, arsR family VT48_09690 PF00324 Amino acid permease VT48_09705 PF03972 MmgE/PrpD family VT48_09710 PF00285 Citrate synthase, C-terminal domain VT48_09715 PF04238 Protein of unknown function (DUF420) VT48_09725 PF06725 3D domain VT48_09725 PF01476 LysM domain VT48_09730 PF00270 DEAD/DEAH box helicase VT48_09730 PF00271 Helicase conserved C-terminal domain VT48_09730 PF16124 RecQ zinc-binding VT48_09730 PF09382 RQC domain VT48_09730 PF00570 HRDC domain VT48_09735 PF01258 Prokaryotic dksA/traR C4-type zinc finger VT48_09745 PF08000 Bacterial PH domain VT48_09755 PF00171 Aldehyde dehydrogenase family VT48_09765 PF13243 Squalene-hopene cyclase C-terminal domain VT48_09765 PF13249 Squalene-hopene cyclase N-terminal domain VT48_09770 PF02777 Iron/manganese superoxide dismutases, C-terminal domain VT48_09770 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain VT48_09775 PF01758 Sodium Bile acid symporter family VT48_09780 PF02817 e3 binding domain VT48_09780 PF00364 Biotin-requiring enzyme VT48_09780 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) VT48_09785 PF16078 2-oxoglutarate dehydrogenase N-terminus VT48_09785 PF16870 2-oxoglutarate dehydrogenase C-terminal VT48_09785 PF00676 Dehydrogenase E1 component VT48_09785 PF02779 Transketolase, pyrimidine binding domain VT48_09790 PF00092 von Willebrand factor type A domain VT48_09795 PF07728 AAA domain (dynein-related subfamily) VT48_09800 PF13627 Prokaryotic lipoprotein-attachment site VT48_09800 PF00080 Copper/zinc superoxide dismutase (SODC) VT48_09805 PF00877 NlpC/P60 family VT48_09805 PF01476 LysM domain VT48_09810 PF10372 Bacterial membrane-spanning protein N-terminus VT48_09810 PF02457 DisA bacterial checkpoint controller nucleotide-binding VT48_09815 PF01554 MatE VT48_09820 PF02585 GlcNAc-PI de-N-acetylase VT48_09825 PF08830 Protein of unknown function (DUF1806) VT48_09835 PF00892 EamA-like transporter family VT48_09850 PF01638 HxlR-like helix-turn-helix VT48_09855 PF00881 Nitroreductase family VT48_09860 PF11755 Protein of unknown function (DUF3311) VT48_09865 PF00474 Sodium:solute symporter family VT48_09870 PF01471 Putative peptidoglycan binding domain VT48_09870 PF17820 PDZ domain VT48_09870 PF03572 Peptidase family S41 VT48_09875 PF08241 Methyltransferase domain VT48_09885 PF02557 D-alanyl-D-alanine carboxypeptidase VT48_09890 PF01048 Phosphorylase superfamily VT48_09895 PF14191 YodL-like VT48_09900 PF01569 PAP2 superfamily VT48_09910 PF06855 YozE SAM-like fold VT48_09915 PF14122 YokU-like protein, putative antitoxin VT48_09920 PF12544 Lysine-2,3-aminomutase VT48_09925 PF13426 PAS domain VT48_09925 PF00158 Sigma-54 interaction domain VT48_09925 PF02954 Bacterial regulatory protein, Fis family VT48_09930 PF00535 Glycosyl transferase family 2 VT48_09945 PF12996 DUF based on E. rectale Gene description (DUF3880) VT48_09955 PF02719 Polysaccharide biosynthesis protein VT48_09960 PF01641 SelR domain VT48_09965 PF01625 Peptide methionine sulfoxide reductase VT48_09970 PF01047 MarR family VT48_09985 PF17431 Uncharacterized YmpT-like VT48_09990 PF09911 Uncharacterized protein conserved in bacteria (DUF2140) VT48_09995 PF13472 GDSL-like Lipase/Acylhydrolase family VT48_10000 PF02630 SCO1/SenC VT48_10005 PF02645 Uncharacterised protein, DegV family COG1307 VT48_10010 PF10751 Protein of unknown function (DUF2535) VT48_10015 PF00585 C-terminal regulatory domain of Threonine dehydratase VT48_10015 PF00291 Pyridoxal-phosphate dependent enzyme VT48_10020 PF08461 Ribonuclease R winged-helix domain VT48_10020 PF00158 Sigma-54 interaction domain VT48_10025 PF03006 Haemolysin-III related VT48_10035 PF00186 Dihydrofolate reductase VT48_10040 PF00303 Thymidylate synthase VT48_10045 PF04608 Phosphatidylglycerophosphatase A VT48_10050 PF14005 YpjP-like protein VT48_10055 PF04445 Putative SAM-dependent methyltransferase VT48_10060 PF06491 Disulphide isomerase VT48_10065 PF00920 Dehydratase family VT48_10070 PF08712 Scaffold protein Nfu/NifU N terminal VT48_10070 PF13769 Virulence factor VT48_10075 PF01966 HD domain VT48_10080 PF00255 Glutathione peroxidase VT48_10085 PF01268 Formate--tetrahydrofolate ligase VT48_10090 PF04204 Homoserine O-succinyltransferase VT48_10095 PF00534 Glycosyl transferases group 1 VT48_10095 PF06925 Monogalactosyldiacylglycerol (MGDG) synthase VT48_10105 PF00313 'Cold-shock' DNA-binding domain VT48_10115 PF10782 Zinc-finger VT48_10120 PF13456 Reverse transcriptase-like VT48_10125 PF02592 Putative vitamin uptake transporter VT48_10130 PF13456 Reverse transcriptase-like VT48_10140 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain VT48_10140 PF01367 5'-3' exonuclease, C-terminal SAM fold VT48_10150 PF00350 Dynamin family VT48_10155 PF04140 Isoprenylcysteine carboxyl methyltransferase (ICMT) family VT48_10160 PF02797 Chalcone and stilbene synthases, C-terminal domain VT48_10160 PF00195 Chalcone and stilbene synthases, N-terminal domain VT48_10170 PF01522 Polysaccharide deacetylase VT48_10175 PF00860 Permease family VT48_10185 PF02074 Carboxypeptidase Taq (M32) metallopeptidase VT48_10190 PF13307 Helicase C-terminal domain VT48_10200 PF02926 THUMP domain VT48_10200 PF01170 Putative RNA methylase family UPF0020 VT48_10205 PF05103 DivIVA protein VT48_10210 PF06908 YspA SLOG family VT48_10215 PF13482 RNase_H superfamily VT48_10220 PF00271 Helicase conserved C-terminal domain VT48_10220 PF09369 Domain of unknown function (DUF1998) VT48_10220 PF00270 DEAD/DEAH box helicase VT48_10225 PF00724 NADH:flavin oxidoreductase / NADH oxidase family VT48_10230 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 VT48_10240 PF14179 YppG-like protein VT48_10260 PF10720 Protein of unknown function (DUF2515) VT48_10265 PF03838 Recombination protein U VT48_10270 PF00905 Penicillin binding protein transpeptidase domain VT48_10270 PF00912 Transglycosylase VT48_10280 PF10576 Iron-sulfur binding domain of endonuclease III VT48_10280 PF00633 Helix-hairpin-helix motif VT48_10280 PF00730 HhH-GPD superfamily base excision DNA repair protein VT48_10285 PF07261 Replication initiation and membrane attachment VT48_10290 PF00152 tRNA synthetases class II (D, K and N) VT48_10290 PF01336 OB-fold nucleic acid binding domain VT48_10295 PF03413 Peptidase propeptide and YPEB domain VT48_10295 PF17881 Domain of unknown function (DUF5590) VT48_10300 PF00929 Exonuclease VT48_10300 PF04851 Type III restriction enzyme, res subunit VT48_10300 PF13307 Helicase C-terminal domain VT48_10305 PF02261 Aspartate decarboxylase VT48_10310 PF02569 Pantoate-beta-alanine ligase VT48_10315 PF02548 Ketopantoate hydroxymethyltransferase VT48_10320 PF02237 Biotin protein ligase C terminal domain VT48_10320 PF08279 HTH domain VT48_10320 PF03099 Biotin/lipoate A/B protein ligase family VT48_10325 PF13735 tRNA nucleotidyltransferase domain 2 putative VT48_10325 PF12627 Probable RNA and SrmB- binding site of polymerase A VT48_10325 PF01743 Poly A polymerase head domain VT48_10330 PF13439 Glycosyltransferase Family 4 VT48_10330 PF00534 Glycosyl transferases group 1 VT48_10335 PF02585 GlcNAc-PI de-N-acetylase VT48_10340 PF02142 MGS-like domain VT48_10345 PF01113 Dihydrodipicolinate reductase, N-terminus VT48_10345 PF05173 Dihydrodipicolinate reductase, C-terminus VT48_10350 PF03819 MazG nucleotide pyrophosphohydrolase domain VT48_10355 PF02588 Uncharacterised 5xTM membrane BCR, YitT family COG1284 VT48_10355 PF10035 Uncharacterized protein conserved in bacteria (DUF2179) VT48_10360 PF09577 Sporulation protein YpjB (SpoYpjB) VT48_10365 PF07187 Protein of unknown function (DUF1405) VT48_10370 PF13442 Cytochrome C oxidase, cbb3-type, subunit III VT48_10370 PF00032 Cytochrome b(C-terminal)/b6/petD VT48_10375 PF00033 Cytochrome b/b6/petB VT48_10380 PF00355 Rieske [2Fe-2S] domain VT48_10385 PF10673 Protein of unknown function (DUF2487) VT48_10390 PF08864 UPF0302 domain VT48_10390 PF08858 IDEAL domain VT48_10400 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) VT48_10405 PF01842 ACT domain VT48_10405 PF02153 Prephenate dehydrogenase VT48_10410 PF00155 Aminotransferase class I and II VT48_10415 PF00290 Tryptophan synthase alpha chain VT48_10420 PF00291 Pyridoxal-phosphate dependent enzyme VT48_10425 PF00697 N-(5'phosphoribosyl)anthranilate (PRA) isomerase VT48_10430 PF00218 Indole-3-glycerol phosphate synthase VT48_10435 PF00591 Glycosyl transferase family, a/b domain VT48_10435 PF02885 Glycosyl transferase family, helical bundle domain VT48_10440 PF00425 chorismate binding enzyme VT48_10440 PF04715 Anthranilate synthase component I, N terminal region VT48_10445 PF07736 Chorismate mutase type I VT48_10450 PF01761 3-dehydroquinate synthase VT48_10455 PF01264 Chorismate synthase VT48_10460 PF03705 CheR methyltransferase, all-alpha domain VT48_10460 PF01739 CheR methyltransferase, SAM binding domain VT48_10465 PF00334 Nucleoside diphosphate kinase VT48_10470 PF00348 Polyprenyl synthetase VT48_10475 PF01209 ubiE/COQ5 methyltransferase family VT48_10480 PF07307 Heptaprenyl diphosphate synthase (HEPPP synthase) subunit 1 VT48_10485 PF02081 Tryptophan RNA-binding attenuator protein VT48_10490 PF01227 GTP cyclohydrolase I VT48_10495 PF00216 Bacterial DNA-binding protein VT48_10500 PF09547 Stage IV sporulation protein A (spore_IV_A) VT48_10510 PF10966 Protein of unknown function (DUF2768) VT48_10515 PF07479 NAD-dependent glycerol-3-phosphate dehydrogenase C-terminus VT48_10515 PF01210 NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus VT48_10520 PF14714 KH-domain-like of EngA bacterial GTPase enzymes, C-terminal VT48_10520 PF01926 50S ribosome-binding GTPase VT48_10530 PF14045 YIEGIA protein VT48_10540 PF01070 FMN-dependent dehydrogenase VT48_10545 PF00575 S1 RNA binding domain VT48_10550 PF02224 Cytidylate kinase VT48_10555 PF17313 Family of unknown function (DUF5359) VT48_10560 PF07238 PilZ domain VT48_10560 PF12945 Flagellar protein YcgR VT48_10565 PF03413 Peptidase propeptide and YPEB domain VT48_10565 PF14620 YpeB sporulation VT48_10570 PF01471 Putative peptidoglycan binding domain VT48_10570 PF07486 Cell Wall Hydrolase VT48_10575 PF13367 PrsW family intramembrane metalloprotease VT48_10585 PF00208 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase VT48_10585 PF02812 Glu/Leu/Phe/Val dehydrogenase, dimerisation domain VT48_10590 PF05389 Negative regulator of genetic competence (MecA) VT48_10595 PF00149 Calcineurin-like phosphoesterase VT48_10600 PF10864 Protein of unknown function (DUF2663) VT48_10605 PF01476 LysM domain VT48_10610 PF02517 CPBP intramembrane metalloprotease VT48_10615 PF00270 DEAD/DEAH box helicase VT48_10615 PF00271 Helicase conserved C-terminal domain VT48_10620 PF14493 Helix-turn-helix domain VT48_10630 PF12822 ECF transporter, substrate-specific component VT48_10635 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain VT48_10635 PF01842 ACT domain VT48_10635 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain VT48_10640 PF01551 Peptidase family M23 VT48_10640 PF01476 LysM domain VT48_10650 PF04542 Sigma-70 region 2 VT48_10650 PF08281 Sigma-70, region 4 VT48_10655 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase VT48_10655 PF18698 Histidine kinase sensor domain VT48_10655 PF00672 HAMP domain VT48_10655 PF00989 PAS fold VT48_10655 PF00512 His Kinase A (phospho-acceptor) domain VT48_10660 PF00486 Transcriptional regulatory protein, C terminal VT48_10660 PF00072 Response regulator receiver domain VT48_10665 PF01578 Cytochrome C assembly protein VT48_10670 PF05140 ResB-like family VT48_10675 PF00578 AhpC/TSA family VT48_10680 PF00849 RNA pseudouridylate synthase VT48_10680 PF01479 S4 domain VT48_10685 PF07670 Nucleoside recognition VT48_10690 PF07670 Nucleoside recognition VT48_10695 PF00768 D-alanyl-D-alanine carboxypeptidase VT48_10695 PF07943 Penicillin-binding protein 5, C-terminal domain VT48_10700 PF13047 Protein of unknown function (DUF3907) VT48_10705 PF04079 Segregation and condensation complex subunit ScpB VT48_10710 PF02616 Segregation and condensation protein ScpA VT48_10715 PF03745 Domain of unknown function (DUF309) VT48_10720 PF00583 Acetyltransferase (GNAT) family VT48_10725 PF00885 6,7-dimethyl-8-ribityllumazine synthase VT48_10735 PF00677 Lumazine binding domain VT48_10755 PF07690 Major Facilitator Superfamily VT48_10760 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD VT48_10765 PF06207 Protein of unknown function (DUF1002) VT48_10770 PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain VT48_10770 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain VT48_10775 PF03323 Bacillus/Clostridium GerA spore germination protein VT48_10780 PF14097 Stage V sporulation protein AE1 VT48_10785 PF03862 SpoVAC/SpoVAEB sporulation membrane protein VT48_10790 PF07451 Stage V sporulation protein AD (SpoVAD) VT48_10795 PF03862 SpoVAC/SpoVAEB sporulation membrane protein VT48_10800 PF13782 Stage V sporulation protein AB VT48_10805 PF12164 Stage V sporulation protein AA VT48_10810 PF04545 Sigma-70, region 4 VT48_10810 PF04542 Sigma-70 region 2 VT48_10810 PF04539 Sigma-70 region 3 VT48_10815 PF13581 Histidine kinase-like ATPase domain VT48_10820 PF01740 STAS domain VT48_10825 PF07943 Penicillin-binding protein 5, C-terminal domain VT48_10825 PF00768 D-alanyl-D-alanine carboxypeptidase VT48_10830 PF01048 Phosphorylase superfamily VT48_10835 PF01676 Metalloenzyme superfamily VT48_10840 PF00589 Phage integrase family VT48_10840 PF02899 Phage integrase, N-terminal SAM-like domain VT48_10845 PF14004 Protein of unknown function (DUF4227) VT48_10850 PF01475 Ferric uptake regulator family VT48_10855 PF01944 Stage II sporulation protein M VT48_10860 PF00082 Subtilase family VT48_10860 PF05922 Peptidase inhibitor I9 VT48_10870 PF13673 Acetyltransferase (GNAT) domain VT48_10880 PF00293 NUDIX domain VT48_10885 PF00248 Aldo/keto reductase family VT48_10895 PF12146 Serine aminopeptidase, S33 VT48_10900 PF18801 response regulator aspartate phosphatase H, N terminal VT48_10905 PF10827 Protein of unknown function (DUF2552) VT48_10910 PF01521 Iron-sulphur cluster biosynthesis VT48_10915 PF03330 Lytic transglycolase VT48_10920 PF04229 GrpB protein VT48_10920 PF13673 Acetyltransferase (GNAT) domain VT48_10925 PF00583 Acetyltransferase (GNAT) family VT48_10930 PF10787 Uncharacterised protein from bacillus cereus group VT48_10935 PF11799 impB/mucB/samB family C-terminal domain VT48_10935 PF00817 impB/mucB/samB family VT48_10940 PF08863 YolD-like protein VT48_10945 PF07690 Major Facilitator Superfamily VT48_10950 PF00485 Phosphoribulokinase / Uridine kinase family VT48_10955 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain VT48_10955 PF07992 Pyridine nucleotide-disulphide oxidoreductase VT48_10965 PF00106 short chain dehydrogenase VT48_10970 PF00753 Metallo-beta-lactamase superfamily VT48_10975 PF03807 NADP oxidoreductase coenzyme F420-dependent VT48_10975 PF14748 Pyrroline-5-carboxylate reductase dimerisation VT48_10985 PF01546 Peptidase family M20/M25/M40 VT48_10990 PF00724 NADH:flavin oxidoreductase / NADH oxidase family VT48_10995 PF12146 Serine aminopeptidase, S33 VT48_11000 PF12897 Alanine-glyoxylate amino-transferase VT48_11005 PF12706 Beta-lactamase superfamily domain VT48_11010 PF02781 Glucose-6-phosphate dehydrogenase, C-terminal domain VT48_11010 PF00479 Glucose-6-phosphate dehydrogenase, NAD binding domain VT48_11015 PF00392 Bacterial regulatory proteins, gntR family VT48_11015 PF07702 UTRA domain VT48_11020 PF00232 Glycosyl hydrolase family 1 VT48_11025 PF02378 Phosphotransferase system, EIIC VT48_11030 PF02255 PTS system, Lactose/Cellobiose specific IIA subunit VT48_11035 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit VT48_11050 PF06800 Sugar transport protein VT48_11055 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase VT48_11055 PF00393 6-phosphogluconate dehydrogenase, C-terminal domain VT48_11060 PF00817 impB/mucB/samB family VT48_11060 PF11799 impB/mucB/samB family C-terminal domain VT48_11060 PF11798 IMS family HHH motif VT48_11070 PF02096 60Kd inner membrane protein VT48_11075 PF01584 CheW-like domain VT48_11080 PF07687 Peptidase dimerisation domain VT48_11080 PF01546 Peptidase family M20/M25/M40 VT48_11085 PF01039 Carboxyl transferase domain VT48_11095 PF03734 L,D-transpeptidase catalytic domain VT48_11100 PF11728 Putative aromatic acid exporter C-terminal domain VT48_11100 PF06081 Aromatic acid exporter family member 1 VT48_11105 PF00005 ABC transporter VT48_11110 PF00528 Binding-protein-dependent transport system inner membrane component VT48_11115 PF00497 Bacterial extracellular solute-binding proteins, family 3 VT48_11120 PF06491 Disulphide isomerase VT48_11125 PF00781 Diacylglycerol kinase catalytic domain VT48_11135 PF00364 Biotin-requiring enzyme VT48_11135 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) VT48_11135 PF02817 e3 binding domain VT48_11140 PF02779 Transketolase, pyrimidine binding domain VT48_11140 PF02780 Transketolase, C-terminal domain VT48_11145 PF00676 Dehydrogenase E1 component VT48_11150 PF07992 Pyridine nucleotide-disulphide oxidoreductase VT48_11150 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain VT48_11155 PF00871 Acetokinase family VT48_11160 PF00208 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase VT48_11160 PF02812 Glu/Leu/Phe/Val dehydrogenase, dimerisation domain VT48_11165 PF01515 Phosphate acetyl/butaryl transferase VT48_11170 PF00989 PAS fold VT48_11170 PF02954 Bacterial regulatory protein, Fis family VT48_11170 PF00158 Sigma-54 interaction domain VT48_11175 PF11118 Protein of unknown function (DUF2627) VT48_11180 PF03009 Glycerophosphoryl diester phosphodiesterase family VT48_11185 PF18801 response regulator aspartate phosphatase H, N terminal VT48_11190 PF00072 Response regulator receiver domain VT48_11190 PF08769 Sporulation initiation factor Spo0A C terminal VT48_11195 PF17820 PDZ domain VT48_11195 PF05580 SpoIVB peptidase S55 VT48_11200 PF13476 AAA domain VT48_11205 PF02863 Arginine repressor, C-terminal domain VT48_11205 PF01316 Arginine repressor, DNA binding domain VT48_11210 PF01479 S4 domain VT48_11210 PF01728 FtsJ-like methyltransferase VT48_11215 PF13292 1-deoxy-D-xylulose-5-phosphate synthase VT48_11215 PF02780 Transketolase, C-terminal domain VT48_11215 PF02779 Transketolase, pyrimidine binding domain VT48_11220 PF00348 Polyprenyl synthetase VT48_11225 PF02609 Exonuclease VII small subunit VT48_11230 PF13742 OB-fold nucleic acid binding domain VT48_11230 PF02601 Exonuclease VII, large subunit VT48_11235 PF00763 Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain VT48_11235 PF02882 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain VT48_11240 PF01029 NusB family VT48_11245 PF03780 Asp23 family, cell envelope-related function VT48_11250 PF00289 Biotin carboxylase, N-terminal domain VT48_11250 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain VT48_11250 PF02785 Biotin carboxylase C-terminal domain VT48_11255 PF00364 Biotin-requiring enzyme VT48_11260 PF12685 SpoIIIAH-like protein VT48_11270 PF09581 Stage III sporulation protein AF (Spore_III_AF) VT48_11275 PF09546 Stage III sporulation protein AE (spore_III_AE) VT48_11280 PF06686 Stage III sporulation protein AC/AD protein family VT48_11285 PF06686 Stage III sporulation protein AC/AD protein family VT48_11290 PF09548 Stage III sporulation protein AB (spore_III_AB) VT48_11300 PF10942 Protein of unknown function (DUF2619) VT48_11305 PF09285 Elongation factor P, C-terminal VT48_11305 PF01132 Elongation factor P (EF-P) OB domain VT48_11305 PF08207 Elongation factor P (EF-P) KOW-like domain VT48_11310 PF00557 Metallopeptidase family M24 VT48_11310 PF01321 Creatinase/Prolidase N-terminal domain VT48_11315 PF01220 Dehydroquinase class II VT48_11320 PF11085 Conserved membrane protein YqhR VT48_11325 PF07136 Protein of unknown function (DUF1385) VT48_11335 PF01734 Patatin-like phospholipase VT48_11340 PF02742 Iron dependent repressor, metal binding and dimerisation domain VT48_11340 PF01325 Iron dependent repressor, N-terminal DNA binding domain VT48_11345 PF03099 Biotin/lipoate A/B protein ligase family VT48_11350 PF00581 Rhodanese-like domain VT48_11355 PF02347 Glycine cleavage system P-protein VT48_11360 PF02347 Glycine cleavage system P-protein VT48_11365 PF01571 Aminomethyltransferase folate-binding domain VT48_11365 PF08669 Glycine cleavage T-protein C-terminal barrel domain VT48_11370 PF00271 Helicase conserved C-terminal domain VT48_11370 PF00176 SNF2 family N-terminal domain VT48_11375 PF11079 Bacterial protein YqhG of unknown function VT48_11380 PF01381 Helix-turn-helix VT48_11380 PF08671 Anti-repressor SinI VT48_11385 PF12389 Camelysin metallo-endopeptidase VT48_11400 PF13028 Protein of unknown function (DUF3889) VT48_11405 PF14038 YqzE-like protein VT48_11425 PF07963 Prokaryotic N-terminal methylation motif VT48_11430 PF07963 Prokaryotic N-terminal methylation motif VT48_11435 PF00482 Type II secretion system (T2SS), protein F VT48_11440 PF00437 Type II/IV secretion system protein VT48_11445 PF01740 STAS domain VT48_11445 PF14361 RsbT co-antagonist protein rsbRD N-terminal domain VT48_11455 PF03960 ArsC family VT48_11460 PF11117 Protein of unknown function (DUF2626) VT48_11465 PF00753 Metallo-beta-lactamase superfamily VT48_11470 PF10958 Protein of unknown function (DUF2759) VT48_11475 PF01910 Thiamine-binding protein VT48_11480 PF07690 Major Facilitator Superfamily VT48_11485 PF00246 Zinc carboxypeptidase VT48_11490 PF00884 Sulfatase VT48_11495 PF00480 ROK family VT48_11500 PF06014 Bacterial protein of unknown function (DUF910) VT48_11505 PF01694 Rhomboid family VT48_11515 PF01812 5-formyltetrahydrofolate cyclo-ligase family VT48_11520 PF00471 Ribosomal protein L33 VT48_11540 PF00005 ABC transporter VT48_11545 PF00005 ABC transporter VT48_11550 PF00528 Binding-protein-dependent transport system inner membrane component VT48_11555 PF00528 Binding-protein-dependent transport system inner membrane component VT48_11560 PF12849 PBP superfamily domain VT48_11570 PF07690 Major Facilitator Superfamily VT48_11575 PF02777 Iron/manganese superoxide dismutases, C-terminal domain VT48_11575 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain VT48_11580 PF04306 Protein of unknown function (DUF456) VT48_11585 PF06691 Protein of unknown function (DUF1189) VT48_11590 PF13302 Acetyltransferase (GNAT) domain VT48_11600 PF04551 GcpE protein VT48_11615 PF00480 ROK family VT48_11620 PF01475 Ferric uptake regulator family VT48_11625 PF00950 ABC 3 transport family VT48_11630 PF00005 ABC transporter VT48_11635 PF02588 Uncharacterised 5xTM membrane BCR, YitT family COG1284 VT48_11635 PF10035 Uncharacterized protein conserved in bacteria (DUF2179) VT48_11640 PF11116 Protein of unknown function (DUF2624) VT48_11645 PF01261 Xylose isomerase-like TIM barrel VT48_11650 PF00271 Helicase conserved C-terminal domain VT48_11650 PF00270 DEAD/DEAH box helicase VT48_11660 PF02401 LytB protein VT48_11665 PF01784 NIF3 (NGG1p interacting factor 3) VT48_11670 PF04816 tRNA (adenine(22)-N(1))-methyltransferase VT48_11675 PF13442 Cytochrome C oxidase, cbb3-type, subunit III VT48_11680 PF04545 Sigma-70, region 4 VT48_11680 PF04539 Sigma-70 region 3 VT48_11680 PF04542 Sigma-70 region 2 VT48_11680 PF03979 Sigma-70 factor, region 1.1 VT48_11680 PF00140 Sigma-70 factor, region 1.2 VT48_11685 PF01807 CHC2 zinc finger VT48_11685 PF10410 DnaB-helicase binding domain of primase VT48_11685 PF08275 DNA primase catalytic core, N-terminal domain VT48_11690 PF02639 Uncharacterized BCR, YaiI/YqxD family COG1671 VT48_11695 PF03618 Kinase/pyrophosphorylase VT48_11700 PF08279 HTH domain VT48_11700 PF00571 CBS domain VT48_11705 PF02092 Glycyl-tRNA synthetase beta subunit VT48_11710 PF02091 Glycyl-tRNA synthetase alpha subunit VT48_11715 PF11967 Recombination protein O N terminal VT48_11715 PF02565 Recombination protein O C terminal VT48_11720 PF07650 KH domain VT48_11720 PF01926 50S ribosome-binding GTPase VT48_11725 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region VT48_11730 PF01219 Prokaryotic diacylglycerol kinase VT48_11735 PF02130 Uncharacterized protein family UPF0054 VT48_11740 PF07697 7TM-HD extracellular VT48_11740 PF01966 HD domain VT48_11740 PF07698 7TM receptor with intracellular HD hydrolase VT48_11745 PF02562 PhoH-like protein VT48_11750 PF06898 Putative stage IV sporulation protein YqfD VT48_11755 PF07873 YabP family VT48_11765 PF12127 SigmaW regulon antibacterial VT48_11770 PF01972 Serine dehydrogenase proteinase VT48_11770 PF01957 NfeD-like C-terminal, partner-binding VT48_11775 PF09424 Yqey-like protein VT48_11780 PF01165 Ribosomal protein S21 VT48_11785 PF02690 Na+/Pi-cotransporter VT48_11790 PF00919 Uncharacterized protein family UPF0004 VT48_11790 PF01938 TRAM domain VT48_11790 PF04055 Radical SAM superfamily VT48_11795 PF04452 RNA methyltransferase VT48_11805 PF00226 DnaJ domain VT48_11805 PF00684 DnaJ central domain VT48_11805 PF01556 DnaJ C terminal domain VT48_11810 PF00012 Hsp70 protein VT48_11815 PF01025 GrpE VT48_11820 PF01628 HrcA protein C terminal domain VT48_11825 PF06969 HemN C-terminal domain VT48_11825 PF04055 Radical SAM superfamily VT48_11830 PF00679 Elongation factor G C-terminus VT48_11830 PF06421 GTP-binding protein LepA C-terminus VT48_11830 PF03144 Elongation factor Tu domain 2 VT48_11830 PF00009 Elongation factor Tu GTP binding domain VT48_11835 PF12438 Protein of unknown function (DUF3679) VT48_11840 PF07454 Stage II sporulation protein P (SpoIIP) VT48_11845 PF03418 Germination protease VT48_11850 PF01649 Ribosomal protein S20 VT48_11855 PF06144 DNA polymerase III, delta subunit VT48_11860 PF14141 YqzM-like protein VT48_11865 PF00753 Metallo-beta-lactamase superfamily VT48_11865 PF13567 Domain of unknown function (DUF4131) VT48_11865 PF03772 Competence protein VT48_11870 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region VT48_11875 PF10531 SLBB domain VT48_11880 PF14748 Pyrroline-5-carboxylate reductase dimerisation VT48_11880 PF03807 NADP oxidoreductase coenzyme F420-dependent VT48_11885 PF13649 Methyltransferase domain VT48_11895 PF01966 HD domain VT48_11900 PF01467 Cytidylyltransferase-like VT48_11905 PF01985 CRS1 / YhbY (CRM) domain VT48_11910 PF18317 Shikimate 5'-dehydrogenase C-terminal domain VT48_11910 PF08501 Shikimate dehydrogenase substrate binding domain VT48_11910 PF01488 Shikimate / quinate 5-dehydrogenase VT48_11915 PF01926 50S ribosome-binding GTPase VT48_11925 PF08970 Sporulation inhibitor A VT48_11930 PF00657 GDSL-like Lipase/Acylhydrolase VT48_11935 PF01522 Polysaccharide deacetylase VT48_11940 PF13176 Tetratricopeptide repeat VT48_11940 PF18801 response regulator aspartate phosphatase H, N terminal VT48_11945 PF04545 Sigma-70, region 4 VT48_11945 PF04542 Sigma-70 region 2 VT48_11955 PF07729 FCD domain VT48_11955 PF00392 Bacterial regulatory proteins, gntR family VT48_11960 PF07690 Major Facilitator Superfamily VT48_11970 PF02780 Transketolase, C-terminal domain VT48_11970 PF02779 Transketolase, pyrimidine binding domain VT48_11975 PF00456 Transketolase, thiamine diphosphate binding domain VT48_11990 PF00293 NUDIX domain VT48_11990 PF13344 Haloacid dehalogenase-like hydrolase VT48_12000 PF13739 Deacetylase PdaC VT48_12000 PF01522 Polysaccharide deacetylase VT48_12000 PF11738 Protein of unknown function (DUF3298) VT48_12035 PF00005 ABC transporter VT48_12055 PF00083 Sugar (and other) transporter VT48_12060 PF02610 L-arabinose isomerase VT48_12060 PF11762 L-arabinose isomerase C-terminal domain VT48_12065 PF00596 Class II Aldolase and Adducin N-terminal domain VT48_12075 PF00392 Bacterial regulatory proteins, gntR family VT48_12085 PF01047 MarR family VT48_12095 PF01380 SIS domain VT48_12100 PF00215 Orotidine 5'-phosphate decarboxylase / HUMPS family VT48_12105 PF01638 HxlR-like helix-turn-helix VT48_12110 PF00135 Carboxylesterase family VT48_12120 PF14176 YxiJ-like protein VT48_12175 PF00905 Penicillin binding protein transpeptidase domain VT48_12180 PF02770 Acyl-CoA dehydrogenase, middle domain VT48_12180 PF02771 Acyl-CoA dehydrogenase, N-terminal domain VT48_12180 PF08028 Acyl-CoA dehydrogenase, C-terminal domain VT48_12185 PF00005 ABC transporter VT48_12190 PF00497 Bacterial extracellular solute-binding proteins, family 3 VT48_12195 PF00528 Binding-protein-dependent transport system inner membrane component VT48_12200 PF00528 Binding-protein-dependent transport system inner membrane component VT48_12205 PF05067 Manganese containing catalase VT48_12210 PF08240 Alcohol dehydrogenase GroES-like domain VT48_12210 PF00107 Zinc-binding dehydrogenase VT48_12225 PF00465 Iron-containing alcohol dehydrogenase VT48_12230 PF01235 Sodium:alanine symporter family VT48_12235 PF03466 LysR substrate binding domain VT48_12235 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family VT48_12250 PF00005 ABC transporter VT48_12255 PF00107 Zinc-binding dehydrogenase VT48_12255 PF08240 Alcohol dehydrogenase GroES-like domain VT48_12260 PF08241 Methyltransferase domain VT48_12265 PF14143 YrhC-like protein VT48_12270 PF01053 Cys/Met metabolism PLP-dependent enzyme VT48_12275 PF00291 Pyridoxal-phosphate dependent enzyme VT48_12280 PF01048 Phosphorylase superfamily VT48_12285 PF13649 Methyltransferase domain VT48_12290 PF10750 Protein of unknown function (DUF2536) VT48_12295 PF07423 Domain of unknown function (DUF1510) VT48_12300 PF03717 Penicillin-binding Protein dimerisation domain VT48_12300 PF00905 Penicillin binding protein transpeptidase domain VT48_12305 PF01272 Transcription elongation factor, GreA/GreB, C-term VT48_12305 PF03449 Transcription elongation factor, N-terminal VT48_12310 PF00485 Phosphoribulokinase / Uridine kinase family VT48_12330 PF02618 YceG-like family VT48_12335 PF02803 Thiolase, C-terminal domain VT48_12335 PF00108 Thiolase, N-terminal domain VT48_12340 PF13193 AMP-binding enzyme C-terminal domain VT48_12340 PF00501 AMP-binding enzyme VT48_12345 PF02632 BioY family VT48_12350 PF06949 Protein of unknown function (DUF1292) VT48_12355 PF03652 Holliday junction resolvase VT48_12360 PF06135 IreB regulatory phosphoprotein VT48_12365 PF02272 DHHA1 domain VT48_12365 PF01411 tRNA synthetases class II (A) VT48_12365 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain VT48_12370 PF01594 AI-2E family transporter VT48_12375 PF00005 ABC transporter VT48_12380 PF00497 Bacterial extracellular solute-binding proteins, family 3 VT48_12385 PF00528 Binding-protein-dependent transport system inner membrane component VT48_12390 PF00528 Binding-protein-dependent transport system inner membrane component VT48_12400 PF05239 PRC-barrel domain VT48_12405 PF14490 Helix-hairpin-helix containing domain VT48_12405 PF18335 ATP-dependent RecD-like DNA helicase SH3 domain VT48_12405 PF13538 UvrD-like helicase C-terminal domain VT48_12410 PF07719 Tetratricopeptide repeat VT48_12410 PF13181 Tetratricopeptide repeat VT48_12420 PF00266 Aminotransferase class-V VT48_12425 PF02082 Transcriptional regulator VT48_12430 PF16193 AAA C-terminal domain VT48_12430 PF12002 MgsA AAA+ ATPase C terminal VT48_12430 PF05496 Holliday junction DNA helicase RuvB P-loop domain VT48_12435 PF00899 ThiF family VT48_12440 PF01336 OB-fold nucleic acid binding domain VT48_12440 PF00152 tRNA synthetases class II (D, K and N) VT48_12440 PF02938 GAD domain VT48_12445 PF13393 Histidyl-tRNA synthetase VT48_12445 PF03129 Anticodon binding domain VT48_12450 PF01520 N-acetylmuramoyl-L-alanine amidase VT48_12450 PF08239 Bacterial SH3 domain VT48_12455 PF02580 D-Tyr-tRNA(Tyr) deacylase VT48_12460 PF04607 Region found in RelA / SpoT proteins VT48_12460 PF02824 TGS domain VT48_12460 PF13291 ACT domain VT48_12465 PF00156 Phosphoribosyl transferase domain VT48_12470 PF02272 DHHA1 domain VT48_12470 PF01368 DHH family VT48_12470 PF17768 RecJ OB domain VT48_12470 PF10141 Single-strand DNA-specific exonuclease, C terminal domain VT48_12475 PF06305 Lipopolysaccharide assembly protein A domain VT48_12480 PF02080 TrkA-C domain VT48_12485 PF02355 Protein export membrane protein VT48_12485 PF07549 SecD/SecF GG Motif VT48_12490 PF13797 Post-transcriptional regulator VT48_12495 PF14667 Polysaccharide biosynthesis C-terminal domain VT48_12495 PF01943 Polysaccharide biosynthesis protein VT48_12500 PF04239 Protein of unknown function (DUF421) VT48_12505 PF12670 Protein of unknown function (DUF3792) VT48_12510 PF02699 Preprotein translocase subunit VT48_12515 PF01702 Queuine tRNA-ribosyltransferase VT48_12520 PF02547 Queuosine biosynthesis protein VT48_12525 PF11146 Protein of unknown function (DUF2905) VT48_12530 PF17864 RuvB AAA lid domain VT48_12530 PF05491 RuvB C-terminal winged helix domain VT48_12530 PF05496 Holliday junction DNA helicase RuvB P-loop domain VT48_12535 PF07499 RuvA, C-terminal domain VT48_12535 PF01330 RuvA N terminal domain VT48_12540 PF08955 BofC C-terminal domain VT48_12540 PF08977 Bypass of Forespore C, N terminal VT48_12555 PF13667 ThiC-associated domain VT48_12555 PF01964 Radical SAM ThiC family VT48_12565 PF09580 Sporulation lipoprotein YhcN/YlaJ (Spore_YhcN_YlaJ) VT48_12570 PF01476 LysM domain VT48_12575 PF02445 Quinolinate synthetase A protein VT48_12580 PF01729 Quinolinate phosphoribosyl transferase, C-terminal domain VT48_12580 PF02749 Quinolinate phosphoribosyl transferase, N-terminal domain VT48_12585 PF00890 FAD binding domain VT48_12585 PF02910 Fumarate reductase flavoprotein C-term VT48_12590 PF00266 Aminotransferase class-V VT48_12595 PF02829 3H domain VT48_12595 PF08279 HTH domain VT48_12600 PF00800 Prephenate dehydratase VT48_12600 PF01842 ACT domain VT48_12605 PF01842 ACT domain VT48_12610 PF09269 Domain of unknown function (DUF1967) VT48_12610 PF01018 GTP1/OBG VT48_12610 PF01926 50S ribosome-binding GTPase VT48_12615 PF14682 Sporulation initiation phospho-transferase B, C-terminal VT48_12615 PF14689 Sensor_kinase_SpoOB-type, alpha-helical domain VT48_12620 PF01016 Ribosomal L27 protein VT48_12625 PF04327 Cysteine protease Prp VT48_12630 PF00829 Ribosomal prokaryotic L21 protein VT48_12635 PF02163 Peptidase family M50 VT48_12640 PF01551 Peptidase family M23 VT48_12645 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain VT48_12650 PF03775 Septum formation inhibitor MinC, C-terminal domain VT48_12655 PF04093 rod shape-determining protein MreD VT48_12660 PF04085 rod shape-determining protein MreC VT48_12670 PF04002 RadC-like JAB domain VT48_12675 PF02545 Maf-like protein VT48_12685 PF01478 Type IV leader peptidase family VT48_12685 PF06750 Bacterial Peptidase A24 N-terminal domain VT48_12690 PF08245 Mur ligase middle domain VT48_12690 PF02875 Mur ligase family, glutamate ligase domain VT48_12695 PF00133 tRNA synthetases class I (I, L, M and V) VT48_12695 PF08264 Anticodon-binding domain of tRNA VT48_12695 PF10458 Valyl tRNA synthetase tRNA binding arm VT48_12710 PF01476 LysM domain VT48_12715 PF00202 Aminotransferase class-III VT48_12720 PF00490 Delta-aminolevulinic acid dehydratase VT48_12725 PF02602 Uroporphyrinogen-III synthase HemD VT48_12730 PF03900 Porphobilinogen deaminase, C-terminal domain VT48_12730 PF01379 Porphobilinogen deaminase, dipyromethane cofactor binding domain VT48_12735 PF01578 Cytochrome C assembly protein VT48_12740 PF00745 Glutamyl-tRNAGlu reductase, dimerisation domain VT48_12740 PF05201 Glutamyl-tRNAGlu reductase, N-terminal domain VT48_12740 PF01488 Shikimate / quinate 5-dehydrogenase VT48_12750 PF01926 50S ribosome-binding GTPase VT48_12755 PF00004 ATPase family associated with various cellular activities (AAA) VT48_12755 PF05362 Lon protease (S16) C-terminal proteolytic domain VT48_12755 PF02190 ATP-dependent protease La (LON) substrate-binding domain VT48_12760 PF05362 Lon protease (S16) C-terminal proteolytic domain VT48_12760 PF00004 ATPase family associated with various cellular activities (AAA) VT48_12765 PF07724 AAA domain (Cdc48 subfamily) VT48_12765 PF06689 ClpX C4-type zinc finger VT48_12765 PF10431 C-terminal, D2-small domain, of ClpB protein VT48_12770 PF05697 Bacterial trigger factor protein (TF) VT48_12770 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase VT48_12770 PF05698 Bacterial trigger factor protein (TF) C-terminus VT48_12780 PF00694 Aconitase C-terminal domain VT48_12785 PF00330 Aconitase family (aconitate hydratase) VT48_12790 PF00180 Isocitrate/isopropylmalate dehydrogenase VT48_12795 PF00682 HMGL-like VT48_12795 PF08502 LeuA allosteric (dimerisation) domain VT48_12800 PF01450 Acetohydroxy acid isomeroreductase, catalytic domain VT48_12800 PF07991 Acetohydroxy acid isomeroreductase, NADPH-binding domain VT48_12805 PF10369 Small subunit of acetolactate synthase VT48_12805 PF01842 ACT domain VT48_12810 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain VT48_12810 PF00205 Thiamine pyrophosphate enzyme, central domain VT48_12810 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain VT48_12815 PF01063 Amino-transferase class IV VT48_12820 PF10282 Lactonase, 7-bladed beta-propeller VT48_12825 PF06803 Protein of unknown function (DUF1232) VT48_12830 PF04914 DltD protein VT48_12835 PF00550 Phosphopantetheine attachment site VT48_12840 PF03062 MBOAT, membrane-bound O-acyltransferase family VT48_12845 PF00501 AMP-binding enzyme VT48_12845 PF13193 AMP-binding enzyme C-terminal domain VT48_12875 PF00589 Phage integrase family VT48_12890 PF12850 Calcineurin-like phosphoesterase superfamily domain VT48_12895 PF01725 Ham1 family VT48_12900 PF01138 3' exoribonuclease family, domain 1 VT48_12900 PF03725 3' exoribonuclease family, domain 2 VT48_12905 PF10646 Sporulation and spore germination VT48_12910 PF01177 Asp/Glu/Hydantoin racemase VT48_12915 PF01047 MarR family VT48_12920 PF00196 Bacterial regulatory proteins, luxR family VT48_12925 PF03600 Citrate transporter VT48_12930 PF03466 LysR substrate binding domain VT48_12930 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family VT48_12935 PF04303 PrpF protein VT48_12940 PF03099 Biotin/lipoate A/B protein ligase family VT48_12940 PF02237 Biotin protein ligase C terminal domain VT48_12945 PF03061 Thioesterase superfamily VT48_12950 PF13183 4Fe-4S dicluster domain VT48_12950 PF13085 2Fe-2S iron-sulfur cluster binding domain VT48_12955 PF00890 FAD binding domain VT48_12955 PF02910 Fumarate reductase flavoprotein C-term VT48_12960 PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit VT48_12965 PF10702 Protein of unknown function (DUF2507) VT48_12970 PF01842 ACT domain VT48_12970 PF13840 ACT domain VT48_12970 PF00696 Amino acid kinase family VT48_12975 PF01541 GIY-YIG catalytic domain VT48_12975 PF02151 UvrB/uvrC motif VT48_12975 PF08459 UvrC Helix-hairpin-helix N-terminal VT48_12980 PF00085 Thioredoxin VT48_12985 PF06964 Alpha-L-arabinofuranosidase C-terminal domain VT48_12990 PF01012 Electron transfer flavoprotein domain VT48_12990 PF00766 Electron transfer flavoprotein FAD-binding domain VT48_12995 PF01012 Electron transfer flavoprotein domain VT48_13000 PF00378 Enoyl-CoA hydratase/isomerase VT48_13005 PF00440 Bacterial regulatory proteins, tetR family VT48_13005 PF08359 YsiA-like protein, C-terminal region VT48_13010 PF00501 AMP-binding enzyme VT48_13010 PF13193 AMP-binding enzyme C-terminal domain VT48_13020 PF03994 Domain of Unknown Function (DUF350) VT48_13025 PF01713 Smr domain VT48_13025 PF00488 MutS domain V VT48_13030 PF02811 PHP domain VT48_13030 PF14716 Helix-hairpin-helix domain VT48_13030 PF14791 DNA polymerase beta thumb VT48_13035 PF02674 Colicin V production protein VT48_13040 PF05164 Cell division protein ZapA VT48_13045 PF01351 Ribonuclease HII VT48_13045 PF11858 Domain of unknown function (DUF3378) VT48_13050 PF03147 Ferredoxin-fold anticodon binding domain VT48_13050 PF03484 tRNA synthetase B5 domain VT48_13050 PF01588 Putative tRNA binding domain VT48_13050 PF17759 Phenylalanyl tRNA synthetase beta chain CLM domain VT48_13050 PF03483 B3/4 domain VT48_13055 PF02912 Aminoacyl tRNA synthetase class II, N-terminal domain VT48_13055 PF01409 tRNA synthetases class II core domain (F) VT48_13060 PF08032 RNA 2'-O ribose methyltransferase substrate binding VT48_13060 PF00588 SpoU rRNA Methylase family VT48_13065 PF14098 Small, acid-soluble spore protein I VT48_13070 PF13722 5TM C-terminal transporter carbon starvation CstA VT48_13070 PF02554 Carbon starvation protein CstA VT48_13075 PF05343 M42 glutamyl aminopeptidase VT48_13085 PF06961 Protein of unknown function (DUF1294) VT48_13090 PF00453 Ribosomal protein L20 VT48_13095 PF01632 Ribosomal protein L35 VT48_13100 PF05198 Translation initiation factor IF-3, N-terminal domain VT48_13100 PF00707 Translation initiation factor IF-3, C-terminal domain VT48_13115 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain VT48_13115 PF08447 PAS fold VT48_13115 PF13426 PAS domain VT48_13120 PF02824 TGS domain VT48_13120 PF03129 Anticodon binding domain VT48_13120 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain VT48_13120 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) VT48_13125 PF08812 YtxC-like family VT48_13130 PF09335 SNARE associated Golgi protein VT48_13135 PF07319 Primosomal protein DnaI N-terminus VT48_13135 PF01695 IstB-like ATP binding protein VT48_13140 PF07261 Replication initiation and membrane attachment VT48_13145 PF03477 ATP cone domain VT48_13155 PF02675 S-adenosylmethionine decarboxylase VT48_13160 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain VT48_13160 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain VT48_13165 PF01121 Dephospho-CoA kinase VT48_13170 PF02659 Putative manganese efflux pump VT48_13175 PF06831 Formamidopyrimidine-DNA glycosylase H2TH domain VT48_13175 PF01149 Formamidopyrimidine-DNA glycosylase N-terminal domain VT48_13175 PF06827 Zinc finger found in FPG and IleRS VT48_13180 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain VT48_13180 PF00476 DNA polymerase family A VT48_13180 PF01367 5'-3' exonuclease, C-terminal SAM fold VT48_13185 PF00512 His Kinase A (phospho-acceptor) domain VT48_13185 PF00989 PAS fold VT48_13185 PF16736 Single Cache-like VT48_13185 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase VT48_13190 PF00072 Response regulator receiver domain VT48_13190 PF00486 Transcriptional regulatory protein, C terminal VT48_13195 PF02866 lactate/malate dehydrogenase, alpha/beta C-terminal domain VT48_13195 PF00056 lactate/malate dehydrogenase, NAD binding domain VT48_13200 PF00180 Isocitrate/isopropylmalate dehydrogenase VT48_13205 PF00285 Citrate synthase, C-terminal domain VT48_13210 PF04284 Protein of unknown function (DUF441) VT48_13215 PF01594 AI-2E family transporter VT48_13220 PF04186 FxsA cytoplasmic membrane protein VT48_13225 PF00391 PEP-utilising enzyme, mobile domain VT48_13225 PF00224 Pyruvate kinase, barrel domain VT48_13225 PF02887 Pyruvate kinase, alpha/beta domain VT48_13230 PF00365 Phosphofructokinase VT48_13235 PF03255 Acetyl co-enzyme A carboxylase carboxyltransferase alpha subunit VT48_13240 PF01039 Carboxyl transferase domain VT48_13240 PF17848 Acetyl-coA carboxylase zinc finger domain VT48_13245 PF00390 Malic enzyme, N-terminal domain VT48_13245 PF03949 Malic enzyme, NAD binding domain VT48_13250 PF01336 OB-fold nucleic acid binding domain VT48_13250 PF14579 Helix-hairpin-helix motif VT48_13250 PF02811 PHP domain VT48_13250 PF17657 Bacterial DNA polymerase III alpha subunit finger domain VT48_13250 PF07733 Bacterial DNA polymerase III alpha NTPase domain VT48_13255 PF14034 Sporulation protein YtrH VT48_13270 PF02272 DHHA1 domain VT48_13270 PF01368 DHH family VT48_13275 PF14007 YtpI-like protein VT48_13280 PF07085 DRTGG domain VT48_13280 PF00571 CBS domain VT48_13280 PF00392 Bacterial regulatory proteins, gntR family VT48_13280 PF03061 Thioesterase superfamily VT48_13300 PF14698 Argininosuccinate lyase C-terminal VT48_13300 PF00206 Lyase VT48_13305 PF00764 Arginosuccinate synthase VT48_13310 PF00994 Probable molybdopterin binding domain VT48_13315 PF00871 Acetokinase family VT48_13320 PF02384 N-6 DNA Methylase VT48_13325 PF08534 Redoxin VT48_13330 PF09579 Sporulation protein YtfJ (Spore_YtfJ) VT48_13335 PF11167 Protein of unknown function (DUF2953) VT48_13340 PF06271 RDD family VT48_13345 PF01343 Peptidase family S49 VT48_13350 PF01513 ATP-NAD kinase VT48_13355 PF03880 DbpA RNA binding domain VT48_13355 PF00270 DEAD/DEAH box helicase VT48_13355 PF00271 Helicase conserved C-terminal domain VT48_13360 PF00487 Fatty acid desaturase VT48_13365 PF07730 Histidine kinase VT48_13370 PF00196 Bacterial regulatory proteins, luxR family VT48_13370 PF00072 Response regulator receiver domain VT48_13375 PF01497 Periplasmic binding protein VT48_13380 PF00486 Transcriptional regulatory protein, C terminal VT48_13380 PF00072 Response regulator receiver domain VT48_13385 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase VT48_13390 PF01098 Cell cycle protein VT48_13395 PF03551 Transcriptional regulator PadR-like family VT48_13400 PF00005 ABC transporter VT48_13405 PF02687 FtsX-like permease family VT48_13410 PF01979 Amidohydrolase family VT48_13415 PF02525 Flavodoxin-like fold VT48_13430 PF01810 LysE type translocator VT48_13435 PF00501 AMP-binding enzyme VT48_13435 PF13193 AMP-binding enzyme C-terminal domain VT48_13440 PF00269 Small, acid-soluble spore proteins, alpha/beta type VT48_13445 PF02568 Thiamine biosynthesis protein (ThiI) VT48_13445 PF02926 THUMP domain VT48_13450 PF00266 Aminotransferase class-V VT48_13455 PF05525 Branched-chain amino acid transport protein VT48_13460 PF05525 Branched-chain amino acid transport protein VT48_13465 PF06160 Septation ring formation regulator, EzrA VT48_13470 PF02811 PHP domain VT48_13475 PF00440 Bacterial regulatory proteins, tetR family VT48_13480 PF13185 GAF domain VT48_13485 PF01479 S4 domain VT48_13485 PF00163 Ribosomal protein S4/S9 N-terminal domain VT48_13495 PF00857 Isochorismatase family VT48_13505 PF04313 Type I restriction enzyme R protein N terminus (HSDR_N) VT48_13505 PF12008 Type I restriction and modification enzyme - subunit R C terminal VT48_13505 PF18766 SWI2/SNF2 ATPase VT48_13510 PF01420 Type I restriction modification DNA specificity domain VT48_13515 PF12161 HsdM N-terminal domain VT48_13515 PF02384 N-6 DNA Methylase VT48_13525 PF01674 Lipase (class 2) VT48_13530 PF03992 Antibiotic biosynthesis monooxygenase VT48_13535 PF00579 tRNA synthetases class I (W and Y) VT48_13535 PF01479 S4 domain VT48_13540 PF13193 AMP-binding enzyme C-terminal domain VT48_13540 PF00501 AMP-binding enzyme VT48_13545 PF00583 Acetyltransferase (GNAT) family VT48_13550 PF00571 CBS domain VT48_13555 PF00850 Histone deacetylase domain VT48_13560 PF00356 Bacterial regulatory proteins, lacI family VT48_13565 PF00793 DAHP synthetase I family VT48_13565 PF01817 Chorismate mutase type II VT48_13570 PF11009 Protein of unknown function (DUF2847) VT48_13575 PF12732 YtxH-like protein VT48_13580 PF06103 Bacterial protein of unknown function (DUF948) VT48_13585 PF01225 Mur ligase family, catalytic domain VT48_13585 PF02875 Mur ligase family, glutamate ligase domain VT48_13585 PF08245 Mur ligase middle domain VT48_13590 PF01580 FtsK/SpoIIIE family VT48_13590 PF09397 Ftsk gamma domain VT48_13590 PF17854 FtsK alpha domain VT48_13595 PF14794 Domain of unknown function (DUF4479) VT48_13595 PF01588 Putative tRNA binding domain VT48_13600 PF07285 Protein of unknown function (DUF1444) VT48_13605 PF00085 Thioredoxin VT48_13615 PF11071 Nucleoside 2-deoxyribosyltransferase YtoQ VT48_13620 PF05343 M42 glutamyl aminopeptidase VT48_13625 PF03413 Peptidase propeptide and YPEB domain VT48_13630 PF00390 Malic enzyme, N-terminal domain VT48_13630 PF03949 Malic enzyme, NAD binding domain VT48_13635 PF00753 Metallo-beta-lactamase superfamily VT48_13640 PF02390 Putative methyltransferase VT48_13645 PF14165 YtzH-like protein VT48_13650 PF01636 Phosphotransferase enzyme family VT48_13655 PF00781 Diacylglycerol kinase catalytic domain VT48_13670 PF00291 Pyridoxal-phosphate dependent enzyme VT48_13675 PF03575 Peptidase family S51 VT48_13680 PF01546 Peptidase family M20/M25/M40 VT48_13685 PF00860 Permease family VT48_13690 PF08220 DeoR-like helix-turn-helix domain VT48_13695 PF01479 S4 domain VT48_13695 PF00849 RNA pseudouridylate synthase VT48_13700 PF01943 Polysaccharide biosynthesis protein VT48_13700 PF14667 Polysaccharide biosynthesis C-terminal domain VT48_13715 PF02028 BCCT, betaine/carnitine/choline family transporter VT48_13720 PF03691 Uncharacterised protein family (UPF0167) VT48_13725 PF10957 Sporulation protein Cse60 VT48_13730 PF00581 Rhodanese-like domain VT48_13735 PF04854 Protein of unknown function, DUF624 VT48_13740 PF01408 Oxidoreductase family, NAD-binding Rossmann fold VT48_13740 PF02894 Oxidoreductase family, C-terminal alpha/beta domain VT48_13750 PF07470 Glycosyl Hydrolase Family 88 VT48_13755 PF00528 Binding-protein-dependent transport system inner membrane component VT48_13760 PF17853 GGDEF-like domain VT48_13760 PF12833 Helix-turn-helix domain VT48_13765 PF01638 HxlR-like helix-turn-helix VT48_13770 PF07690 Major Facilitator Superfamily VT48_13775 PF00248 Aldo/keto reductase family VT48_13780 PF13416 Bacterial extracellular solute-binding protein VT48_13785 PF00528 Binding-protein-dependent transport system inner membrane component VT48_13790 PF01370 NAD dependent epimerase/dehydratase family VT48_13795 PF01738 Dienelactone hydrolase family VT48_13800 PF13603 Leucyl-tRNA synthetase, Domain 2 VT48_13800 PF00133 tRNA synthetases class I (I, L, M and V) VT48_13800 PF09334 tRNA synthetases class I (M) VT48_13800 PF08264 Anticodon-binding domain of tRNA VT48_13805 PF14074 Protein of unknown function (DUF4257) VT48_13810 PF01740 STAS domain VT48_13810 PF13426 PAS domain VT48_13815 PF04791 LMBR1-like membrane protein VT48_13820 PF12704 MacB-like periplasmic core domain VT48_13820 PF02687 FtsX-like permease family VT48_13825 PF00005 ABC transporter VT48_13835 PF00005 ABC transporter VT48_13840 PF00392 Bacterial regulatory proteins, gntR family VT48_13855 PF10732 Protein of unknown function (DUF2524) VT48_13860 PF04055 Radical SAM superfamily VT48_13860 PF16199 Radical_SAM C-terminal domain VT48_13865 PF06962 Putative rRNA methylase VT48_13870 PF07070 SpoOM protein VT48_13875 PF10776 Protein of unknown function (DUF2600) VT48_13880 PF12146 Serine aminopeptidase, S33 VT48_13885 PF00132 Bacterial transferase hexapeptide (six repeats) VT48_13890 PF13537 Glutamine amidotransferase domain VT48_13890 PF00733 Asparagine synthase VT48_13895 PF02773 S-adenosylmethionine synthetase, C-terminal domain VT48_13895 PF02772 S-adenosylmethionine synthetase, central domain VT48_13895 PF00438 S-adenosylmethionine synthetase, N-terminal domain VT48_13900 PF01293 Phosphoenolpyruvate carboxykinase VT48_13905 PF10763 Protein of unknown function (DUF2584) VT48_13910 PF00326 Prolyl oligopeptidase family VT48_13915 PF01593 Flavin containing amine oxidoreductase VT48_13920 PF00535 Glycosyl transferase family 2 VT48_13940 PF00005 ABC transporter VT48_13945 PF00528 Binding-protein-dependent transport system inner membrane component VT48_13950 PF00293 NUDIX domain VT48_13955 PF02342 TerD domain VT48_13970 PF05105 Bacteriophage holin family VT48_13980 PF00210 Ferritin-like domain VT48_13990 PF13115 YtkA-like VT48_13995 PF02664 S-Ribosylhomocysteinase (LuxS) VT48_14000 PF01809 Putative membrane protein insertion efficiency factor VT48_14005 PF00484 Carbonic anhydrase VT48_14010 PF09223 ZinT (YodA) periplasmic lipocalin-like zinc-recruitment VT48_14010 PF01297 Zinc-uptake complex component A periplasmic VT48_14015 PF01197 Ribosomal protein L31 VT48_14020 PF01654 Cytochrome bd terminal oxidase subunit I VT48_14025 PF02322 Cytochrome bd terminal oxidase subunit II VT48_14035 PF13378 Enolase C-terminal domain-like VT48_14035 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain VT48_14040 PF00501 AMP-binding enzyme VT48_14040 PF13193 AMP-binding enzyme C-terminal domain VT48_14045 PF00378 Enoyl-CoA hydratase/isomerase VT48_14050 PF00561 alpha/beta hydrolase fold VT48_14055 PF16582 Middle domain of thiamine pyrophosphate VT48_14055 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain VT48_14055 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain VT48_14060 PF00425 chorismate binding enzyme VT48_14065 PF01040 UbiA prenyltransferase family VT48_14070 PF01258 Prokaryotic dksA/traR C4-type zinc finger VT48_14075 PF03073 TspO/MBR family VT48_14200 PF09515 Thiamine transporter protein (Thia_YuaJ) VT48_14205 PF00583 Acetyltransferase (GNAT) family VT48_14210 PF06803 Protein of unknown function (DUF1232) VT48_14215 PF01098 Cell cycle protein VT48_14220 PF01098 Cell cycle protein VT48_14225 PF15975 Flotillin VT48_14225 PF01145 SPFH domain / Band 7 family VT48_14235 PF12867 DinB superfamily VT48_14240 PF00465 Iron-containing alcohol dehydrogenase VT48_14265 PF01471 Putative peptidoglycan binding domain VT48_14265 PF01510 N-acetylmuramoyl-L-alanine amidase VT48_14270 PF04688 SPP1 phage holin VT48_14275 PF10960 BhlA holin family VT48_14295 PF09693 Phage uncharacterised protein (Phage_XkdX) VT48_14300 PF09636 XkdW protein VT48_14315 PF10076 Uncharacterised protein conserved in bacteria (DUF2313) VT48_14320 PF04865 Baseplate J-like protein VT48_14325 PF10934 Protein of unknown function (DUF2634) VT48_14330 PF10844 Protein of unknown function (DUF2577) VT48_14340 PF01476 LysM domain VT48_14345 PF01464 Transglycosylase SLT domain VT48_14345 PF01464 Transglycosylase SLT domain VT48_14350 PF08890 Phage XkdN-like tail assembly chaperone protein, TAC VT48_14355 PF09393 Phage tail tube protein VT48_14360 PF17481 Phage tail sheath protein beta-sandwich domain VT48_14360 PF17482 Phage tail sheath C-terminal domain VT48_14360 PF04984 Phage tail sheath protein subtilisin-like domain VT48_14375 PF04883 Bacteriophage HK97-gp10, putative tail-component VT48_14380 PF12206 Domain of unknown function (DUF3599) VT48_14385 PF11436 Protein of unknown function (DUF3199) VT48_14390 PF05065 Phage capsid family VT48_14395 PF14550 Putative phage serine protease XkdF VT48_14400 PF04860 Phage portal protein VT48_14405 PF04466 Phage terminase large subunit VT48_14405 PF17288 Terminase RNAseH like domain VT48_14410 PF10668 Phage terminase small subunit VT48_14415 PF08281 Sigma-70, region 4 VT48_14420 PF17356 Phage-like element PBSX protein XtrA VT48_14425 PF05866 Endodeoxyribonuclease RusA VT48_14440 PF01381 Helix-turn-helix VT48_14450 PF06968 Biotin and Thiamin Synthesis associated domain VT48_14450 PF04055 Radical SAM superfamily VT48_14460 PF02673 Bacitracin resistance protein BacA VT48_14465 PF01594 AI-2E family transporter VT48_14475 PF01408 Oxidoreductase family, NAD-binding Rossmann fold VT48_14475 PF02894 Oxidoreductase family, C-terminal alpha/beta domain VT48_14480 PF01965 DJ-1/PfpI family VT48_14485 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain VT48_14485 PF02743 Cache domain VT48_14485 PF00672 HAMP domain VT48_14490 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain VT48_14490 PF00672 HAMP domain VT48_14490 PF02743 Cache domain VT48_14495 PF00672 HAMP domain VT48_14495 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain VT48_14495 PF02743 Cache domain VT48_14500 PF02743 Cache domain VT48_14500 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain VT48_14500 PF00672 HAMP domain VT48_14515 PF03060 Nitronate monooxygenase VT48_14520 PF01894 Uncharacterised protein family UPF0047 VT48_14525 PF01595 Cyclin M transmembrane N-terminal domain VT48_14525 PF03471 Transporter associated domain VT48_14525 PF00571 CBS domain VT48_14530 PF04298 Putative neutral zinc metallopeptidase VT48_14540 PF02254 TrkA-N domain VT48_14540 PF07885 Ion channel VT48_14545 PF08868 YugN-like family VT48_14555 PF00342 Phosphoglucose isomerase VT48_14560 PF00465 Iron-containing alcohol dehydrogenase VT48_14565 PF00465 Iron-containing alcohol dehydrogenase VT48_14570 PF04070 Domain of unknown function (DUF378) VT48_14575 PF00575 S1 RNA binding domain VT48_14580 PF00155 Aminotransferase class I and II VT48_14585 PF01037 Lrp/AsnC ligand binding domain VT48_14590 PF00561 alpha/beta hydrolase fold VT48_14590 PF08386 TAP-like protein VT48_14595 PF08958 Domain of unknown function (DUF1871) VT48_14600 PF00155 Aminotransferase class I and II VT48_14605 PF00512 His Kinase A (phospho-acceptor) domain VT48_14605 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase VT48_14610 PF08810 Kinase associated protein B VT48_14615 PF00929 Exonuclease VT48_14620 PF07690 Major Facilitator Superfamily VT48_14625 PF00905 Penicillin binding protein transpeptidase domain VT48_14625 PF00912 Transglycosylase VT48_14630 PF04134 Protein of unknown function, DUF393 VT48_14635 PF17328 Family of unknown function (DUF5366) VT48_14640 PF14689 Sensor_kinase_SpoOB-type, alpha-helical domain VT48_14640 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase VT48_14640 PF00989 PAS fold VT48_14640 PF17203 Single cache domain 3 VT48_14645 PF00072 Response regulator receiver domain VT48_14670 PF03390 2-hydroxycarboxylate transporter family VT48_14685 PF13244 Domain of unknown function (DUF4040) VT48_14685 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus VT48_14685 PF00361 Proton-conducting membrane transporter VT48_14690 PF04039 Domain related to MnhB subunit of Na+/H+ antiporter VT48_14695 PF00420 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L VT48_14700 PF00361 Proton-conducting membrane transporter VT48_14705 PF01899 Na+/H+ ion antiporter subunit VT48_14710 PF04066 Multiple resistance and pH regulation protein F (MrpF / PhaF) VT48_14715 PF03334 Na+/H+ antiporter subunit VT48_14720 PF03061 Thioesterase superfamily VT48_14725 PF00072 Response regulator receiver domain VT48_14725 PF00196 Bacterial regulatory proteins, luxR family VT48_14730 PF07730 Histidine kinase VT48_14730 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase VT48_14740 PF00348 Polyprenyl synthetase VT48_14745 PF08181 DegQ (SacQ) family VT48_14755 PF08668 HDOD domain VT48_14755 PF00563 EAL domain VT48_14760 PF17767 Nicotinate phosphoribosyltransferase (NAPRTase) N-terminal domain VT48_14760 PF04095 Nicotinate phosphoribosyltransferase (NAPRTase) family VT48_14760 PF17956 Nicotinate phosphoribosyltransferase C-terminal domain VT48_14765 PF00857 Isochorismatase family VT48_14770 PF07997 Protein of unknown function (DUF1694) VT48_14775 PF14166 YueH-like protein VT48_14780 PF10676 Spore germination protein gerPA/gerPF VT48_14785 PF10676 Spore germination protein gerPA/gerPF VT48_14790 PF01594 AI-2E family transporter VT48_14795 PF10842 Protein of unknown function (DUF2642) VT48_14805 PF01966 HD domain VT48_14810 PF00106 short chain dehydrogenase VT48_14815 PF17355 Family of unknown function (DUF5383) VT48_14825 PF01580 FtsK/SpoIIIE family VT48_14825 PF12538 DNA transporter VT48_14830 PF10140 WXG100 protein secretion system (Wss), protein YukC VT48_14835 PF08817 WXG100 protein secretion system (Wss), protein YukD VT48_14840 PF06013 Proteins of 100 residues with WXG VT48_14845 PF13556 PucR C-terminal helix-turn-helix domain VT48_14845 PF17853 GGDEF-like domain VT48_14845 PF06018 CodY GAF-like domain VT48_14850 PF05222 Alanine dehydrogenase/PNT, N-terminal domain VT48_14850 PF01262 Alanine dehydrogenase/PNT, C-terminal domain VT48_14855 PF02632 BioY family VT48_14860 PF03553 Na+/H+ antiporter family VT48_14860 PF13726 Na+-H+ antiporter family VT48_14865 PF00883 Cytosol aminopeptidase family, catalytic domain VT48_14865 PF02789 Cytosol aminopeptidase family, N-terminal domain VT48_14870 PF02681 Divergent PAP2 family VT48_14875 PF06725 3D domain VT48_14880 PF14068 Putative membrane protein VT48_14885 PF07992 Pyridine nucleotide-disulphide oxidoreductase VT48_14890 PF07992 Pyridine nucleotide-disulphide oxidoreductase VT48_14905 PF01521 Iron-sulphur cluster biosynthesis VT48_14910 PF01678 Diaminopimelate epimerase VT48_14915 PF07293 Protein of unknown function (DUF1450) VT48_14920 PF07992 Pyridine nucleotide-disulphide oxidoreductase VT48_14930 PF07315 Protein of unknown function (DUF1462) VT48_14935 PF01106 NifU-like domain VT48_14940 PF00326 Prolyl oligopeptidase family VT48_14940 PF07676 WD40-like Beta Propeller Repeat VT48_14945 PF08544 GHMP kinases C terminal VT48_14945 PF00288 GHMP kinases N terminal domain VT48_14950 PF00291 Pyridoxal-phosphate dependent enzyme VT48_14955 PF01842 ACT domain VT48_14955 PF00742 Homoserine dehydrogenase VT48_14955 PF03447 Homoserine dehydrogenase, NAD binding domain VT48_14960 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain VT48_14960 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain VT48_14970 PF04608 Phosphatidylglycerophosphatase A VT48_14975 PF13344 Haloacid dehalogenase-like hydrolase VT48_14980 PF01934 Protein of unknown function DUF86 VT48_14985 PF06265 Protein of unknown function (DUF1027) VT48_14990 PF09580 Sporulation lipoprotein YhcN/YlaJ (Spore_YhcN_YlaJ) VT48_14995 PF04055 Radical SAM superfamily VT48_14995 PF16881 N-terminal domain of lipoyl synthase of Radical_SAM family VT48_15000 PF01551 Peptidase family M23 VT48_15010 PF10903 Protein of unknown function (DUF2691) VT48_15015 PF09560 Sporulation protein YunB (Spo_YunB) VT48_15020 PF08827 Domain of unknown function (DUF1805) VT48_15025 PF02872 5'-nucleotidase, C-terminal domain VT48_15030 PF01904 Protein of unknown function DUF72 VT48_15035 PF13556 PucR C-terminal helix-turn-helix domain VT48_15035 PF17853 GGDEF-like domain VT48_15035 PF07905 Purine catabolism regulatory protein-like family VT48_15040 PF00190 Cupin VT48_15045 PF07690 Major Facilitator Superfamily VT48_15050 PF00266 Aminotransferase class-V VT48_15055 PF04231 Endonuclease I VT48_15070 PF01032 FecCD transport family VT48_15075 PF01032 FecCD transport family VT48_15080 PF01497 Periplasmic binding protein VT48_15090 PF07859 alpha/beta hydrolase fold VT48_15095 PF06146 Phosphate-starvation-inducible E VT48_15100 PF00512 His Kinase A (phospho-acceptor) domain VT48_15105 PF00072 Response regulator receiver domain VT48_15105 PF00486 Transcriptional regulatory protein, C terminal VT48_15110 PF04235 Protein of unknown function (DUF418) VT48_15120 PF02525 Flavodoxin-like fold VT48_15125 PF01370 NAD dependent epimerase/dehydratase family VT48_15125 PF08338 Domain of unknown function (DUF1731) VT48_15130 PF00440 Bacterial regulatory proteins, tetR family VT48_15130 PF18665 Tetracyclin repressor-like, C-terminal domain VT48_15145 PF01458 Uncharacterized protein family (UPF0051) VT48_15150 PF01592 NifU-like N terminal domain VT48_15155 PF00266 Aminotransferase class-V VT48_15160 PF01458 Uncharacterized protein family (UPF0051) VT48_15165 PF00005 ABC transporter VT48_15175 PF02627 Carboxymuconolactone decarboxylase family VT48_15180 PF03180 NLPA lipoprotein VT48_15185 PF00528 Binding-protein-dependent transport system inner membrane component VT48_15190 PF00005 ABC transporter VT48_15190 PF09383 NIL domain VT48_15195 PF02036 SCP-2 sterol transfer family VT48_15200 PF00085 Thioredoxin VT48_15205 PF01751 Toprim domain VT48_15210 PF10830 Protein of unknown function (DUF2553) VT48_15215 PF01597 Glycine cleavage H-protein VT48_15220 PF03960 ArsC family VT48_15225 PF02771 Acyl-CoA dehydrogenase, N-terminal domain VT48_15225 PF02770 Acyl-CoA dehydrogenase, middle domain VT48_15225 PF00441 Acyl-CoA dehydrogenase, C-terminal domain VT48_15230 PF02803 Thiolase, C-terminal domain VT48_15230 PF00108 Thiolase, N-terminal domain VT48_15235 PF00378 Enoyl-CoA hydratase/isomerase VT48_15235 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain VT48_15235 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain VT48_15245 PF07875 Coat F domain VT48_15250 PF10835 Protein of unknown function (DUF2573) VT48_15255 PF00005 ABC transporter VT48_15265 PF00106 short chain dehydrogenase VT48_15270 PF13180 PDZ domain VT48_15275 PF00072 Response regulator receiver domain VT48_15275 PF00486 Transcriptional regulatory protein, C terminal VT48_15280 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase VT48_15280 PF00672 HAMP domain VT48_15280 PF00512 His Kinase A (phospho-acceptor) domain VT48_15285 PF00440 Bacterial regulatory proteins, tetR family VT48_15290 PF00206 Lyase VT48_15290 PF10415 Fumarase C C-terminus VT48_15295 PF03323 Bacillus/Clostridium GerA spore germination protein VT48_15300 PF03845 Spore germination protein VT48_15305 PF05504 Spore germination B3/ GerAC like, C-terminal VT48_15315 PF00196 Bacterial regulatory proteins, luxR family VT48_15315 PF00072 Response regulator receiver domain VT48_15320 PF00672 HAMP domain VT48_15320 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase VT48_15320 PF07730 Histidine kinase VT48_15325 PF09922 Cell wall-active antibiotics response 4TMS YvqF VT48_15335 PF04012 PspA/IM30 family VT48_15345 PF01923 Cobalamin adenosyltransferase VT48_15355 PF04166 Pyridoxal phosphate biosynthetic protein PdxA VT48_15360 PF07005 Sugar-binding N-terminal domain VT48_15360 PF17042 Nucleotide-binding C-terminal domain VT48_15365 PF00158 Sigma-54 interaction domain VT48_15365 PF01590 GAF domain VT48_15380 PF00465 Iron-containing alcohol dehydrogenase VT48_15385 PF00701 Dihydrodipicolinate synthetase family VT48_15390 PF00005 ABC transporter VT48_15395 PF01032 FecCD transport family VT48_15400 PF01497 Periplasmic binding protein VT48_15405 PF00295 Glycosyl hydrolases family 28 VT48_15410 PF08666 SAF domain VT48_15410 PF04295 D-galactarate dehydratase / Altronate hydrolase, C terminus VT48_15415 PF08125 Mannitol dehydrogenase C-terminal domain VT48_15415 PF01232 Mannitol dehydrogenase Rossmann domain VT48_15420 PF00356 Bacterial regulatory proteins, lacI family VT48_15425 PF02614 Glucuronate isomerase VT48_15430 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase VT48_15430 PF00512 His Kinase A (phospho-acceptor) domain VT48_15435 PF00072 Response regulator receiver domain VT48_15435 PF00486 Transcriptional regulatory protein, C terminal VT48_15440 PF00005 ABC transporter VT48_15445 PF01032 FecCD transport family VT48_15450 PF01032 FecCD transport family VT48_15455 PF01497 Periplasmic binding protein VT48_15460 PF13520 Amino acid permease VT48_15465 PF09575 Small spore protein J (Spore_SspJ) VT48_15475 PF04307 LexA-binding, inner membrane-associated putative hydrolase VT48_15480 PF00884 Sulfatase VT48_15490 PF00528 Binding-protein-dependent transport system inner membrane component VT48_15495 PF00248 Aldo/keto reductase family VT48_15500 PF00480 ROK family VT48_15505 PF00999 Sodium/hydrogen exchanger family VT48_15510 PF03458 UPF0126 domain VT48_15515 PF02600 Disulfide bond formation protein DsbB VT48_15520 PF13462 Thioredoxin VT48_15525 PF00403 Heavy-metal-associated domain VT48_15530 PF00005 ABC transporter VT48_15535 PF00950 ABC 3 transport family VT48_15540 PF01297 Zinc-uptake complex component A periplasmic VT48_15550 PF13977 BetI-type transcriptional repressor, C-terminal VT48_15550 PF00440 Bacterial regulatory proteins, tetR family VT48_15555 PF08664 YcbB domain VT48_15555 PF00072 Response regulator receiver domain VT48_15560 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase VT48_15565 PF10415 Fumarase C C-terminus VT48_15565 PF00206 Lyase VT48_15570 PF00375 Sodium:dicarboxylate symporter family VT48_15580 PF00403 Heavy-metal-associated domain VT48_15585 PF00403 Heavy-metal-associated domain VT48_15590 PF02583 Metal-sensitive transcriptional repressor VT48_15600 PF00990 Diguanylate cyclase, GGDEF domain VT48_15600 PF00072 Response regulator receiver domain VT48_15620 PF01668 SmpB protein VT48_15625 PF08206 Ribonuclease B OB domain VT48_15625 PF17876 Cold shock domain VT48_15625 PF00575 S1 RNA binding domain VT48_15625 PF00773 RNB domain VT48_15630 PF12146 Serine aminopeptidase, S33 VT48_15635 PF03840 Preprotein translocase SecG subunit VT48_15640 PF18277 AbrB C-terminal domain VT48_15640 PF04014 Antidote-toxin recognition MazE, bacterial antitoxin VT48_15645 PF01381 Helix-turn-helix VT48_15660 PF01638 HxlR-like helix-turn-helix VT48_15665 PF00528 Binding-protein-dependent transport system inner membrane component VT48_15670 PF04069 Substrate binding domain of ABC-type glycine betaine transport system VT48_15675 PF00528 Binding-protein-dependent transport system inner membrane component VT48_15680 PF00005 ABC transporter VT48_15680 PF00571 CBS domain VT48_15685 PF12802 MarR family VT48_15690 PF01914 MarC family integral membrane protein VT48_15700 PF00583 Acetyltransferase (GNAT) family VT48_15720 PF00005 ABC transporter VT48_15730 PF00113 Enolase, C-terminal TIM barrel domain VT48_15730 PF03952 Enolase, N-terminal domain VT48_15735 PF01676 Metalloenzyme superfamily VT48_15735 PF06415 BPG-independent PGAM N-terminus (iPGM_N) VT48_15740 PF00121 Triosephosphate isomerase VT48_15745 PF00162 Phosphoglycerate kinase VT48_15750 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain VT48_15750 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain VT48_15755 PF04198 Putative sugar-binding domain VT48_15760 PF00324 Amino acid permease VT48_15765 PF00202 Aminotransferase class-III VT48_15770 PF02954 Bacterial regulatory protein, Fis family VT48_15770 PF00158 Sigma-54 interaction domain VT48_15770 PF13426 PAS domain VT48_15775 PF00392 Bacterial regulatory proteins, gntR family VT48_15775 PF07729 FCD domain VT48_15780 PF04552 Sigma-54, DNA binding domain VT48_15780 PF00309 Sigma-54 factor, Activator interacting domain (AID) VT48_15780 PF04963 Sigma-54 factor, core binding domain VT48_15785 PF09628 YvfG protein VT48_15790 PF01554 MatE VT48_15795 PF08352 Oligopeptide/dipeptide transporter, C-terminal region VT48_15795 PF00005 ABC transporter VT48_15800 PF08352 Oligopeptide/dipeptide transporter, C-terminal region VT48_15800 PF00005 ABC transporter VT48_15805 PF00528 Binding-protein-dependent transport system inner membrane component VT48_15810 PF00528 Binding-protein-dependent transport system inner membrane component VT48_15815 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle VT48_15820 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family VT48_15825 PF17836 PglD N-terminal domain VT48_15825 PF00132 Bacterial transferase hexapeptide (six repeats) VT48_15830 PF02397 Bacterial sugar transferase VT48_15835 PF14667 Polysaccharide biosynthesis C-terminal domain VT48_15835 PF01943 Polysaccharide biosynthesis protein VT48_15840 PF04230 Polysaccharide pyruvyl transferase VT48_15845 PF00535 Glycosyl transferase family 2 VT48_15855 PF13439 Glycosyltransferase Family 4 VT48_15855 PF00534 Glycosyl transferases group 1 VT48_15860 PF00535 Glycosyl transferase family 2 VT48_15865 PF00534 Glycosyl transferases group 1 VT48_15865 PF13439 Glycosyltransferase Family 4 VT48_15870 PF02719 Polysaccharide biosynthesis protein VT48_15875 PF13614 AAA domain VT48_15880 PF02706 Chain length determinant protein VT48_15885 PF08671 Anti-repressor SinI VT48_15885 PF01381 Helix-turn-helix VT48_15895 PF01497 Periplasmic binding protein VT48_15900 PF01032 FecCD transport family VT48_15905 PF01032 FecCD transport family VT48_15910 PF11738 Protein of unknown function (DUF3298) VT48_15910 PF13739 Deacetylase PdaC VT48_15910 PF01522 Polysaccharide deacetylase VT48_15920 PF00201 UDP-glucoronosyl and UDP-glucosyl transferase VT48_15925 PF01497 Periplasmic binding protein VT48_15940 PF00574 Clp protease VT48_15945 PF03641 Possible lysine decarboxylase VT48_15950 PF03819 MazG nucleotide pyrophosphohydrolase domain VT48_15955 PF00916 Sulfate permease family VT48_15955 PF01740 STAS domain VT48_15960 PF00484 Carbonic anhydrase VT48_15965 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain VT48_15965 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain VT48_15970 PF00545 ribonuclease VT48_15975 PF00797 N-acetyltransferase VT48_15980 PF00381 PTS HPr component phosphorylation site VT48_15985 PF14527 WhiA LAGLIDADG-like domain VT48_15985 PF10298 WhiA N-terminal LAGLIDADG-like domain VT48_15985 PF02650 WhiA C-terminal HTH domain VT48_15990 PF01933 Uncharacterised protein family UPF0052 VT48_15995 PF03668 P-loop ATPase protein family VT48_16000 PF00293 NUDIX domain VT48_16005 PF07992 Pyridine nucleotide-disulphide oxidoreductase VT48_16010 PF00877 NlpC/P60 family VT48_16020 PF01503 Phosphoribosyl-ATP pyrophosphohydrolase VT48_16020 PF01502 Phosphoribosyl-AMP cyclohydrolase VT48_16025 PF00977 Histidine biosynthesis protein VT48_16030 PF00977 Histidine biosynthesis protein VT48_16035 PF00117 Glutamine amidotransferase class-I VT48_16040 PF00475 Imidazoleglycerol-phosphate dehydratase VT48_16045 PF00815 Histidinol dehydrogenase VT48_16050 PF01634 ATP phosphoribosyltransferase VT48_16055 PF13393 Histidyl-tRNA synthetase VT48_16060 PF13529 Peptidase_C39 like family VT48_16070 PF13460 NAD(P)H-binding VT48_16075 PF02082 Transcriptional regulator VT48_16080 PF14602 Hexapeptide repeat of succinyl-transferase VT48_16085 PF13419 Haloacid dehalogenase-like hydrolase VT48_16090 PF07670 Nucleoside recognition VT48_16095 PF01790 Prolipoprotein diacylglyceryl transferase VT48_16100 PF02603 HPr Serine kinase N terminus VT48_16100 PF07475 HPr Serine kinase C-terminal domain VT48_16105 PF01979 Amidohydrolase family VT48_16110 PF01182 Glucosamine-6-phosphate isomerases/6-phosphogluconolactonase VT48_16120 PF00149 Calcineurin-like phosphoesterase VT48_16125 PF04020 Mycobacterial 4 TMS phage holin, superfamily IV VT48_16130 PF04024 PspC domain VT48_16135 PF13349 Putative adhesin VT48_16150 PF00005 ABC transporter VT48_16150 PF17755 UvrA DNA-binding domain VT48_16150 PF17760 UvrA interaction domain VT48_16155 PF02151 UvrB/uvrC motif VT48_16155 PF12344 Ultra-violet resistance protein B VT48_16155 PF00271 Helicase conserved C-terminal domain VT48_16155 PF04851 Type III restriction enzyme, res subunit VT48_16155 PF17757 UvrB interaction domain VT48_16160 PF09964 Uncharacterized protein conserved in bacteria (DUF2198) VT48_16165 PF01326 Pyruvate phosphate dikinase, PEP/pyruvate binding domain VT48_16165 PF00391 PEP-utilising enzyme, mobile domain VT48_16170 PF00440 Bacterial regulatory proteins, tetR family VT48_16175 PF07690 Major Facilitator Superfamily VT48_16185 PF00486 Transcriptional regulatory protein, C terminal VT48_16185 PF00072 Response regulator receiver domain VT48_16190 PF00512 His Kinase A (phospho-acceptor) domain VT48_16190 PF18698 Histidine kinase sensor domain VT48_16190 PF00672 HAMP domain VT48_16190 PF00989 PAS fold VT48_16190 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase VT48_16195 PF13231 Dolichyl-phosphate-mannose-protein mannosyltransferase VT48_16200 PF00535 Glycosyl transferase family 2 VT48_16205 PF00324 Amino acid permease VT48_16210 PF00881 Nitroreductase family VT48_16215 PF01638 HxlR-like helix-turn-helix VT48_16220 PF17820 PDZ domain VT48_16225 PF17423 Swarming motility protein VT48_16230 PF17820 PDZ domain VT48_16230 PF03572 Peptidase family S41 VT48_16230 PF01471 Putative peptidoglycan binding domain VT48_16235 PF01925 Sulfite exporter TauE/SafE VT48_16240 PF00877 NlpC/P60 family VT48_16245 PF02687 FtsX-like permease family VT48_16245 PF18075 FtsX extracellular domain VT48_16250 PF00005 ABC transporter VT48_16255 PF13442 Cytochrome C oxidase, cbb3-type, subunit III VT48_16260 PF02588 Uncharacterised 5xTM membrane BCR, YitT family COG1284 VT48_16260 PF10035 Uncharacterized protein conserved in bacteria (DUF2179) VT48_16275 PF03462 PCRF domain VT48_16275 PF00472 RF-1 domain VT48_16280 PF07517 SecA DEAD-like domain VT48_16280 PF02810 SEC-C motif VT48_16280 PF01043 SecA preprotein cross-linking domain VT48_16280 PF07516 SecA Wing and Scaffold domain VT48_16285 PF02482 Sigma 54 modulation protein / S30EA ribosomal protein VT48_16285 PF16321 Sigma 54 modulation/S30EA ribosomal protein C terminus VT48_16290 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain VT48_16290 PF00672 HAMP domain VT48_16290 PF02743 Cache domain VT48_16305 PF02561 Flagellar protein FliS VT48_16310 PF02465 Flagellar hook-associated protein 2 N-terminus VT48_16310 PF07196 Flagellin hook IN motif VT48_16310 PF07195 Flagellar hook-associated protein 2 C-terminus VT48_16315 PF03646 FlaG protein VT48_16320 PF02599 Global regulator protein family VT48_16325 PF02623 FliW protein VT48_16335 PF00669 Bacterial flagellin N-terminal helical region VT48_16335 PF00700 Bacterial flagellin C-terminal helical region VT48_16340 PF06429 Flagellar basal body rod FlgEFG protein C-terminal VT48_16340 PF00460 Flagella basal body rod protein VT48_16345 PF05130 FlgN protein VT48_16365 PF10719 Late competence development protein ComFB VT48_16370 PF04851 Type III restriction enzyme, res subunit VT48_16370 PF00271 Helicase conserved C-terminal domain VT48_16375 PF02645 Uncharacterised protein, DegV family COG1307 VT48_16380 PF00196 Bacterial regulatory proteins, luxR family VT48_16380 PF00072 Response regulator receiver domain VT48_16385 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase VT48_16385 PF07730 Histidine kinase VT48_16385 PF05384 Sensor protein DegS VT48_16390 PF09186 Domain of unknown function (DUF1949) VT48_16390 PF01205 Uncharacterized protein family UPF0029 VT48_16395 PF03816 Cell envelope-related transcriptional attenuator domain VT48_16400 PF00953 Glycosyl transferase family 4 VT48_16410 PF00535 Glycosyl transferase family 2 VT48_16415 PF02706 Chain length determinant protein VT48_16420 PF04932 O-Antigen ligase VT48_16425 PF16363 GDP-mannose 4,6 dehydratase VT48_16430 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain VT48_16430 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain VT48_16430 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain VT48_16435 PF13439 Glycosyltransferase Family 4 VT48_16435 PF00534 Glycosyl transferases group 1 VT48_16440 PF01943 Polysaccharide biosynthesis protein VT48_16440 PF14667 Polysaccharide biosynthesis C-terminal domain VT48_16445 PF02397 Bacterial sugar transferase VT48_16455 PF04122 Putative cell wall binding repeat 2 VT48_16455 PF01520 N-acetylmuramoyl-L-alanine amidase VT48_16460 PF01520 N-acetylmuramoyl-L-alanine amidase VT48_16460 PF04122 Putative cell wall binding repeat 2 VT48_16465 PF04122 Putative cell wall binding repeat 2 VT48_16465 PF08486 Stage II sporulation protein VT48_16475 PF03816 Cell envelope-related transcriptional attenuator domain VT48_16480 PF02350 UDP-N-acetylglucosamine 2-epimerase VT48_16485 PF00483 Nucleotidyl transferase VT48_16490 PF00005 ABC transporter VT48_16495 PF01061 ABC-2 type transporter VT48_16505 PF04464 CDP-Glycerol:Poly(glycerophosphate) glycerophosphotransferase VT48_16515 PF01467 Cytidylyltransferase-like VT48_16520 PF03808 Glycosyl transferase WecB/TagA/CpsF family VT48_16525 PF04464 CDP-Glycerol:Poly(glycerophosphate) glycerophosphotransferase VT48_16530 PF05036 Sporulation related domain VT48_16530 PF01832 Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase VT48_16530 PF08239 Bacterial SH3 domain VT48_16535 PF01238 Phosphomannose isomerase type I VT48_16540 PF00528 Binding-protein-dependent transport system inner membrane component VT48_16545 PF00528 Binding-protein-dependent transport system inner membrane component VT48_16550 PF01547 Bacterial extracellular solute-binding protein VT48_16555 PF00196 Bacterial regulatory proteins, luxR family VT48_16555 PF00072 Response regulator receiver domain VT48_16560 PF00672 HAMP domain VT48_16560 PF06580 Histidine kinase VT48_16560 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase VT48_16560 PF02743 Cache domain VT48_16570 PF00583 Acetyltransferase (GNAT) family VT48_16575 PF01081 KDPG and KHG aldolase VT48_16580 PF00294 pfkB family carbohydrate kinase VT48_16585 PF00356 Bacterial regulatory proteins, lacI family VT48_16590 PF04962 KduI/IolB family VT48_16600 PF03323 Bacillus/Clostridium GerA spore germination protein VT48_16605 PF03845 Spore germination protein VT48_16610 PF05504 Spore germination B3/ GerAC like, C-terminal VT48_16615 PF00535 Glycosyl transferase family 2 VT48_16615 PF00534 Glycosyl transferases group 1 VT48_16620 PF00083 Sugar (and other) transporter VT48_16625 PF03816 Cell envelope-related transcriptional attenuator domain VT48_16635 PF00877 NlpC/P60 family VT48_16640 PF09587 Bacterial capsule synthesis protein PGA_cap VT48_16645 PF14102 Capsule biosynthesis CapC VT48_16650 PF08245 Mur ligase middle domain VT48_16655 PF03323 Bacillus/Clostridium GerA spore germination protein VT48_16665 PF05504 Spore germination B3/ GerAC like, C-terminal VT48_16670 PF00356 Bacterial regulatory proteins, lacI family VT48_16675 PF00294 pfkB family carbohydrate kinase VT48_16680 PF05025 RbsD / FucU transport protein family VT48_16685 PF00005 ABC transporter VT48_16690 PF02653 Branched-chain amino acid transport system / permease component VT48_16695 PF13407 Periplasmic binding protein domain VT48_16700 PF01613 Flavin reductase like domain VT48_16705 PF03466 LysR substrate binding domain VT48_16705 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family VT48_16710 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain VT48_16710 PF00205 Thiamine pyrophosphate enzyme, central domain VT48_16710 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain VT48_16715 PF03306 Alpha-acetolactate decarboxylase VT48_16720 PF13404 AsnC-type helix-turn-helix domain VT48_16720 PF01037 Lrp/AsnC ligand binding domain VT48_16725 PF02417 Chromate transporter VT48_16730 PF02417 Chromate transporter VT48_16735 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain VT48_16735 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain VT48_16735 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain VT48_16740 PF04434 SWIM zinc finger VT48_16745 PF00176 SNF2 family N-terminal domain VT48_16745 PF12419 SNF2 Helicase protein VT48_16745 PF00271 Helicase conserved C-terminal domain VT48_16750 PF01740 STAS domain VT48_16750 PF13426 PAS domain VT48_16765 PF14183 YwpF-like protein VT48_16770 PF01741 Large-conductance mechanosensitive channel, MscL VT48_16775 PF07977 FabA-like domain VT48_16780 PF18801 response regulator aspartate phosphatase H, N terminal VT48_16785 PF00460 Flagella basal body rod protein VT48_16785 PF06429 Flagellar basal body rod FlgEFG protein C-terminal VT48_16790 PF06429 Flagellar basal body rod FlgEFG protein C-terminal VT48_16790 PF00460 Flagella basal body rod protein VT48_16800 PF12116 Stage III sporulation protein D VT48_16805 PF01047 MarR family VT48_16810 PF07690 Major Facilitator Superfamily VT48_16815 PF01569 PAP2 superfamily VT48_16820 PF07690 Major Facilitator Superfamily VT48_16825 PF00497 Bacterial extracellular solute-binding proteins, family 3 VT48_16830 PF00528 Binding-protein-dependent transport system inner membrane component VT48_16835 PF00005 ABC transporter VT48_16840 PF00909 Ammonium Transporter Family VT48_16845 PF00543 Nitrogen regulatory protein P-II VT48_16850 PF01551 Peptidase family M23 VT48_16855 PF00583 Acetyltransferase (GNAT) family VT48_16870 PF00005 ABC transporter VT48_16890 PF00471 Ribosomal protein L33 VT48_16895 PF02492 CobW/HypB/UreG, nucleotide-binding domain VT48_16895 PF07683 Cobalamin synthesis protein cobW C-terminal domain VT48_16900 PF00253 Ribosomal protein S14p/S29e VT48_16905 PF04055 Radical SAM superfamily VT48_16905 PF06463 Molybdenum Cofactor Synthesis C VT48_16910 PF02634 FdhD/NarQ family VT48_16915 PF07690 Major Facilitator Superfamily VT48_16920 PF01568 Molydopterin dinucleotide binding domain VT48_16920 PF00384 Molybdopterin oxidoreductase VT48_16920 PF18364 Molybdopterin oxidoreductase N-terminal domain VT48_16925 PF00092 von Willebrand factor type A domain VT48_16930 PF00092 von Willebrand factor type A domain VT48_16935 PF08486 Stage II sporulation protein VT48_16940 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) VT48_16945 PF08680 TATA-box binding VT48_16950 PF06612 Protein of unknown function (DUF1146) VT48_16960 PF00401 ATP synthase, Delta/Epsilon chain, long alpha-helix domain VT48_16960 PF02823 ATP synthase, Delta/Epsilon chain, beta-sandwich domain VT48_16965 PF02874 ATP synthase alpha/beta family, beta-barrel domain VT48_16965 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain VT48_16970 PF00231 ATP synthase VT48_16975 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain VT48_16975 PF02874 ATP synthase alpha/beta family, beta-barrel domain VT48_16975 PF00306 ATP synthase alpha/beta chain, C terminal domain VT48_16980 PF00213 ATP synthase delta (OSCP) subunit VT48_16985 PF00430 ATP synthase B/B' CF(0) VT48_16990 PF00137 ATP synthase subunit C VT48_16995 PF00119 ATP synthase A chain VT48_17000 PF03899 ATP synthase I chain VT48_17010 PF00464 Serine hydroxymethyltransferase VT48_17015 PF04260 Protein of unknown function (DUF436) VT48_17020 PF02502 Ribose/Galactose Isomerase VT48_17025 PF01451 Low molecular weight phosphotyrosine protein phosphatase VT48_17030 PF02659 Putative manganese efflux pump VT48_17035 PF01300 Telomere recombination VT48_17035 PF03481 Putative GTP-binding controlling metal-binding VT48_17045 PF09551 Stage II sporulation protein R (spore_II_R) VT48_17055 PF05175 Methyltransferase small domain VT48_17055 PF17827 PrmC N-terminal domain VT48_17060 PF00472 RF-1 domain VT48_17060 PF03462 PCRF domain VT48_17065 PF13411 MerR HTH family regulatory protein VT48_17070 PF03547 Membrane transport protein VT48_17075 PF00390 Malic enzyme, N-terminal domain VT48_17075 PF03949 Malic enzyme, NAD binding domain VT48_17080 PF00265 Thymidine kinase VT48_17085 PF01197 Ribosomal protein L31 VT48_17090 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain VT48_17090 PF07498 Rho termination factor, N-terminal domain VT48_17090 PF07497 Rho termination factor, RNA-binding domain VT48_17095 PF03320 Bacterial fructose-1,6-bisphosphatase, glpX-encoded VT48_17100 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) VT48_17105 PF00923 Transaldolase/Fructose-6-phosphate aldolase VT48_17110 PF01116 Fructose-bisphosphate aldolase class-II VT48_17115 PF00072 Response regulator receiver domain VT48_17120 PF10740 Domain of unknown function (DUF2529) VT48_17125 PF06418 CTP synthase N-terminus VT48_17125 PF00117 Glutamine amidotransferase class-I VT48_17130 PF05066 HB1, ASXL, restriction endonuclease HTH domain VT48_17145 PF02770 Acyl-CoA dehydrogenase, middle domain VT48_17145 PF02771 Acyl-CoA dehydrogenase, N-terminal domain VT48_17145 PF00441 Acyl-CoA dehydrogenase, C-terminal domain VT48_17150 PF02771 Acyl-CoA dehydrogenase, N-terminal domain VT48_17150 PF00441 Acyl-CoA dehydrogenase, C-terminal domain VT48_17150 PF02770 Acyl-CoA dehydrogenase, middle domain VT48_17155 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain VT48_17155 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain VT48_17160 PF00108 Thiolase, N-terminal domain VT48_17160 PF02803 Thiolase, C-terminal domain VT48_17165 PF13183 4Fe-4S dicluster domain VT48_17165 PF02754 Cysteine-rich domain VT48_17170 PF13091 PLD-like domain VT48_17175 PF03851 UV-endonuclease UvdE VT48_17185 PF02016 LD-carboxypeptidase N-terminal domain VT48_17185 PF17676 LD-carboxypeptidase C-terminal domain VT48_17195 PF00664 ABC transporter transmembrane region VT48_17195 PF00005 ABC transporter VT48_17200 PF13396 Phospholipase_D-nuclease N-terminal VT48_17200 PF13091 PLD-like domain VT48_17205 PF02016 LD-carboxypeptidase N-terminal domain VT48_17205 PF17676 LD-carboxypeptidase C-terminal domain VT48_17215 PF03485 Arginyl tRNA synthetase N terminal domain VT48_17215 PF05746 DALR anticodon binding domain VT48_17215 PF00750 tRNA synthetases class I (R) VT48_17220 PF09148 Domain of unknown function (DUF1934) VT48_17230 PF00491 Arginase family VT48_17235 PF17284 Spermidine synthase tetramerisation domain VT48_17240 PF00905 Penicillin binding protein transpeptidase domain VT48_17240 PF00912 Transglycosylase VT48_17245 PF08741 YwhD family VT48_17250 PF02163 Peptidase family M50 VT48_17255 PF01361 Tautomerase enzyme VT48_17265 PF00296 Luciferase-like monooxygenase VT48_17270 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family VT48_17270 PF03466 LysR substrate binding domain VT48_17275 PF03358 NADPH-dependent FMN reductase VT48_17280 PF00296 Luciferase-like monooxygenase VT48_17285 PF00462 Glutaredoxin VT48_17290 PF00583 Acetyltransferase (GNAT) family VT48_17295 PF00528 Binding-protein-dependent transport system inner membrane component VT48_17305 PF00528 Binding-protein-dependent transport system inner membrane component VT48_17310 PF00005 ABC transporter VT48_17320 PF01966 HD domain VT48_17325 PF07293 Protein of unknown function (DUF1450) VT48_17340 PF00535 Glycosyl transferase family 2 VT48_17340 PF07238 PilZ domain VT48_17350 PF03099 Biotin/lipoate A/B protein ligase family VT48_17375 PF14449 Pre-toxin TG VT48_17375 PF04740 LXG domain of WXG superfamily VT48_17405 PF03737 Aldolase/RraA VT48_17415 PF01515 Phosphate acetyl/butaryl transferase VT48_17425 PF07690 Major Facilitator Superfamily VT48_17430 PF01037 Lrp/AsnC ligand binding domain VT48_17435 PF07690 Major Facilitator Superfamily VT48_17445 PF07883 Cupin domain VT48_17460 PF00155 Aminotransferase class I and II VT48_17470 PF00908 dTDP-4-dehydrorhamnose 3,5-epimerase VT48_17475 PF04321 RmlD substrate binding domain VT48_17480 PF16363 GDP-mannose 4,6 dehydratase VT48_17485 PF00483 Nucleotidyl transferase VT48_17490 PF04101 Glycosyltransferase family 28 C-terminal domain VT48_17495 PF02348 Cytidylyltransferase VT48_17500 PF03102 NeuB family VT48_17500 PF08666 SAF domain VT48_17505 PF00583 Acetyltransferase (GNAT) family VT48_17510 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family VT48_17515 PF04464 CDP-Glycerol:Poly(glycerophosphate) glycerophosphotransferase VT48_17520 PF00535 Glycosyl transferase family 2 VT48_17530 PF09671 Spore coat protein (Spore_GerQ) VT48_17540 PF04241 Protein of unknown function (DUF423) VT48_17545 PF00860 Permease family VT48_17550 PF17261 Family of unknown function (DUF5327) VT48_17555 PF00171 Aldehyde dehydrogenase family VT48_17560 PF03167 Uracil DNA glycosylase superfamily VT48_17565 PF00535 Glycosyl transferase family 2 VT48_17575 PF08543 Phosphomethylpyrimidine kinase VT48_17590 PF08244 Glycosyl hydrolases family 32 C terminal VT48_17590 PF00251 Glycosyl hydrolases family 32 N-terminal domain VT48_17595 PF02378 Phosphotransferase system, EIIC VT48_17595 PF00367 phosphotransferase system, EIIB VT48_17600 PF00874 PRD domain VT48_17600 PF03123 CAT RNA binding domain VT48_17610 PF02225 PA domain VT48_17610 PF05922 Peptidase inhibitor I9 VT48_17610 PF13860 FlgD Ig-like domain VT48_17610 PF00082 Subtilase family VT48_17620 PF00296 Luciferase-like monooxygenase VT48_17625 PF00881 Nitroreductase family VT48_17630 PF01098 Cell cycle protein VT48_17635 PF17368 Spore morphogenesis and germination YwcE VT48_17640 PF03626 Prokaryotic Cytochrome C oxidase subunit IV VT48_17645 PF00510 Cytochrome c oxidase subunit III VT48_17650 PF00115 Cytochrome C and Quinol oxidase polypeptide I VT48_17655 PF00116 Cytochrome C oxidase subunit II, periplasmic domain VT48_17655 PF02790 Cytochrome C oxidase subunit II, transmembrane domain VT48_17665 PF01087 Galactose-1-phosphate uridyl transferase, N-terminal domain VT48_17665 PF02744 Galactose-1-phosphate uridyl transferase, C-terminal domain VT48_17670 PF16363 GDP-mannose 4,6 dehydratase VT48_17675 PF00288 GHMP kinases N terminal domain VT48_17675 PF08544 GHMP kinases C terminal VT48_17675 PF10509 Galactokinase galactose-binding signature VT48_17690 PF04138 GtrA-like protein VT48_17720 PF18801 response regulator aspartate phosphatase H, N terminal VT48_17720 PF13181 Tetratricopeptide repeat VT48_17735 PF04341 Protein of unknown function, DUF485 VT48_17740 PF00474 Sodium:solute symporter family VT48_17755 PF02581 Thiamine monophosphate synthase VT48_17760 PF02110 Hydroxyethylthiazole kinase family VT48_17765 PF03466 LysR substrate binding domain VT48_17765 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family VT48_17770 PF03788 LrgA family VT48_17775 PF04172 LrgB-like family VT48_17780 PF17785 PUA-like domain VT48_17780 PF10672 S-adenosylmethionine-dependent methyltransferase VT48_17785 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily VT48_17790 PF00005 ABC transporter VT48_17795 PF00528 Binding-protein-dependent transport system inner membrane component VT48_17800 PF00497 Bacterial extracellular solute-binding proteins, family 3 VT48_17805 PF18801 response regulator aspartate phosphatase H, N terminal VT48_17810 PF04607 Region found in RelA / SpoT proteins VT48_17815 PF02653 Branched-chain amino acid transport system / permease component VT48_17820 PF00005 ABC transporter VT48_17825 PF13407 Periplasmic binding protein domain VT48_17830 PF13229 Right handed beta helix region VT48_17835 PF01063 Amino-transferase class IV VT48_17850 PF11975 Family 4 glycosyl hydrolase C-terminal domain VT48_17850 PF02056 Family 4 glycosyl hydrolase VT48_17855 PF02255 PTS system, Lactose/Cellobiose specific IIA subunit VT48_17860 PF02378 Phosphotransferase system, EIIC VT48_17865 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit VT48_17870 PF05043 Mga helix-turn-helix domain VT48_17870 PF00874 PRD domain VT48_17870 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 VT48_17870 PF08279 HTH domain VT48_17885 PF00208 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase VT48_17885 PF02812 Glu/Leu/Phe/Val dehydrogenase, dimerisation domain VT48_17900 PF04542 Sigma-70 region 2 VT48_17900 PF08281 Sigma-70, region 4 VT48_17905 PF00544 Pectate lyase VT48_17910 PF00005 ABC transporter VT48_17910 PF00664 ABC transporter transmembrane region VT48_17915 PF00005 ABC transporter VT48_17915 PF00664 ABC transporter transmembrane region VT48_17920 PF02322 Cytochrome bd terminal oxidase subunit II VT48_17925 PF01654 Cytochrome bd terminal oxidase subunit I VT48_17930 PF00005 ABC transporter VT48_17935 PF01032 FecCD transport family VT48_17940 PF01497 Periplasmic binding protein VT48_17945 PF04203 Sortase domain VT48_17950 PF00005 ABC transporter VT48_17955 PF01032 FecCD transport family VT48_17960 PF01497 Periplasmic binding protein VT48_17970 PF05031 Iron Transport-associated domain VT48_17975 PF05031 Iron Transport-associated domain VT48_17980 PF01638 HxlR-like helix-turn-helix VT48_17985 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily VT48_17990 PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase VT48_17990 PF00925 GTP cyclohydrolase II VT48_17995 PF01872 RibD C-terminal domain VT48_17995 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region VT48_18000 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily VT48_18005 PF01522 Polysaccharide deacetylase VT48_18010 PF02255 PTS system, Lactose/Cellobiose specific IIA subunit VT48_18015 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit VT48_18020 PF00232 Glycosyl hydrolase family 1 VT48_18025 PF03786 D-mannonate dehydratase (UxuA) VT48_18030 PF02378 Phosphotransferase system, EIIC VT48_18035 PF05043 Mga helix-turn-helix domain VT48_18035 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 VT48_18035 PF08279 HTH domain VT48_18035 PF00874 PRD domain VT48_18060 PF03553 Na+/H+ antiporter family VT48_18065 PF00206 Lyase VT48_18065 PF10415 Fumarase C C-terminus VT48_18070 PF00710 Asparaginase, N-terminal VT48_18070 PF17763 Glutaminase/Asparaginase C-terminal domain VT48_18075 PF01381 Helix-turn-helix VT48_18085 PF17353 Family of unknown function (DUF5381) VT48_18100 PF06013 Proteins of 100 residues with WXG VT48_18105 PF01546 Peptidase family M20/M25/M40 VT48_18105 PF07687 Peptidase dimerisation domain VT48_18120 PF01418 Helix-turn-helix domain, rpiR family VT48_18120 PF01380 SIS domain VT48_18125 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase VT48_18125 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase VT48_18135 PF02447 GntP family permease VT48_18140 PF01717 Cobalamin-independent synthase, Catalytic domain VT48_18145 PF00232 Glycosyl hydrolase family 1 VT48_18150 PF00367 phosphotransferase system, EIIB VT48_18150 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 VT48_18150 PF02378 Phosphotransferase system, EIIC VT48_18155 PF03123 CAT RNA binding domain VT48_18155 PF00874 PRD domain VT48_18160 PF09234 Domain of unknown function (DUF1963) VT48_18170 PF02361 Cobalt transport protein VT48_18175 PF00005 ABC transporter VT48_18180 PF09819 ABC-type cobalt transport system, permease component VT48_18185 PF03070 TENA/THI-4/PQQC family VT48_18210 PF05547 Immune inhibitor A peptidase M6 VT48_18210 PF00801 PKD domain VT48_18215 PF03992 Antibiotic biosynthesis monooxygenase VT48_18220 PF00881 Nitroreductase family VT48_18225 PF01047 MarR family VT48_18230 PF07831 Pyrimidine nucleoside phosphorylase C-terminal domain VT48_18230 PF00591 Glycosyl transferase family, a/b domain VT48_18230 PF02885 Glycosyl transferase family, helical bundle domain VT48_18235 PF01773 Na+ dependent nucleoside transporter N-terminus VT48_18235 PF07662 Na+ dependent nucleoside transporter C-terminus VT48_18240 PF01791 DeoC/LacD family aldolase VT48_18245 PF04198 Putative sugar-binding domain VT48_18255 PF01757 Acyltransferase family VT48_18260 PF07690 Major Facilitator Superfamily VT48_18265 PF01488 Shikimate / quinate 5-dehydrogenase VT48_18265 PF00745 Glutamyl-tRNAGlu reductase, dimerisation domain VT48_18265 PF05201 Glutamyl-tRNAGlu reductase, N-terminal domain VT48_18270 PF13649 Methyltransferase domain VT48_18275 PF00072 Response regulator receiver domain VT48_18275 PF00196 Bacterial regulatory proteins, luxR family VT48_18285 PF13411 MerR HTH family regulatory protein VT48_18290 PF01408 Oxidoreductase family, NAD-binding Rossmann fold VT48_18295 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain VT48_18300 PF00324 Amino acid permease VT48_18305 PF08713 DNA alkylation repair enzyme VT48_18310 PF02447 GntP family permease VT48_18315 PF02782 FGGY family of carbohydrate kinases, C-terminal domain VT48_18315 PF00370 FGGY family of carbohydrate kinases, N-terminal domain VT48_18320 PF01380 SIS domain VT48_18320 PF01418 Helix-turn-helix domain, rpiR family VT48_18325 PF01156 Inosine-uridine preferring nucleoside hydrolase VT48_18360 PF03466 LysR substrate binding domain VT48_18360 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family VT48_18365 PF00356 Bacterial regulatory proteins, lacI family VT48_18370 PF13416 Bacterial extracellular solute-binding protein VT48_18375 PF00528 Binding-protein-dependent transport system inner membrane component VT48_18380 PF00528 Binding-protein-dependent transport system inner membrane component VT48_18385 PF07745 Glycosyl hydrolase family 53 VT48_18390 PF08533 Beta-galactosidase C-terminal domain VT48_18390 PF08532 Beta-galactosidase trimerisation domain VT48_18390 PF02449 Beta-galactosidase VT48_18395 PF03600 Citrate transporter VT48_18405 PF12679 ABC-2 family transporter protein VT48_18410 PF00005 ABC transporter VT48_18415 PF08274 PhnA Zinc-Ribbon VT48_18415 PF03831 PhnA domain VT48_18420 PF02595 Glycerate kinase family VT48_18425 PF02447 GntP family permease VT48_18430 PF05651 Putative sugar diacid recognition VT48_18430 PF17853 GGDEF-like domain VT48_18430 PF13556 PucR C-terminal helix-turn-helix domain VT48_18435 PF17922 Tetracyclin repressor-like, C-terminal domain VT48_18435 PF00440 Bacterial regulatory proteins, tetR family VT48_18440 PF07690 Major Facilitator Superfamily VT48_18450 PF00005 ABC transporter VT48_18460 PF18801 response regulator aspartate phosphatase H, N terminal VT48_18465 PF03123 CAT RNA binding domain VT48_18465 PF00874 PRD domain VT48_18470 PF00232 Glycosyl hydrolase family 1 VT48_18475 PF02378 Phosphotransferase system, EIIC VT48_18475 PF00367 phosphotransferase system, EIIB VT48_18475 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 VT48_18500 PF00293 NUDIX domain VT48_18515 PF00324 Amino acid permease VT48_18525 PF07690 Major Facilitator Superfamily VT48_18530 PF08501 Shikimate dehydrogenase substrate binding domain VT48_18530 PF18317 Shikimate 5'-dehydrogenase C-terminal domain VT48_18535 PF07690 Major Facilitator Superfamily VT48_18540 PF00232 Glycosyl hydrolase family 1 VT48_18545 PF00874 PRD domain VT48_18545 PF03123 CAT RNA binding domain VT48_18550 PF02378 Phosphotransferase system, EIIC VT48_18550 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 VT48_18550 PF00367 phosphotransferase system, EIIB VT48_18595 PF00232 Glycosyl hydrolase family 1 VT48_18600 PF02378 Phosphotransferase system, EIIC VT48_18600 PF00367 phosphotransferase system, EIIB VT48_18600 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 VT48_18605 PF07702 UTRA domain VT48_18605 PF00392 Bacterial regulatory proteins, gntR family VT48_18620 PF02567 Phenazine biosynthesis-like protein VT48_18625 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family VT48_18625 PF03466 LysR substrate binding domain VT48_18645 PF00027 Cyclic nucleotide-binding domain VT48_18645 PF13545 Crp-like helix-turn-helix domain VT48_18660 PF16123 Hydroxyacylglutathione hydrolase C-terminus VT48_18660 PF00753 Metallo-beta-lactamase superfamily VT48_18670 PF07728 AAA domain (dynein-related subfamily) VT48_18675 PF09563 LlaJI restriction endonuclease VT48_18680 PF00145 C-5 cytosine-specific DNA methylase VT48_18700 PF13186 Iron-sulfur cluster-binding domain VT48_18700 PF04055 Radical SAM superfamily VT48_18705 PF02590 Predicted SPOUT methyltransferase VT48_18710 PF02361 Cobalt transport protein VT48_18715 PF00005 ABC transporter VT48_18715 PF12558 ATP-binding cassette cobalt transporter VT48_18720 PF07155 ECF-type riboflavin transporter, S component VT48_18735 PF00005 ABC transporter VT48_18740 PF00583 Acetyltransferase (GNAT) family VT48_18745 PF13180 PDZ domain VT48_18750 PF00753 Metallo-beta-lactamase superfamily VT48_18755 PF09648 YycH protein VT48_18760 PF07435 YycH protein VT48_18765 PF00512 His Kinase A (phospho-acceptor) domain VT48_18765 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase VT48_18765 PF00672 HAMP domain VT48_18765 PF13426 PAS domain VT48_18770 PF00072 Response regulator receiver domain VT48_18770 PF00486 Transcriptional regulatory protein, C terminal VT48_18795 PF00578 AhpC/TSA family VT48_18805 PF04235 Protein of unknown function (DUF418) VT48_18810 PF00709 Adenylosuccinate synthetase VT48_18815 PF00440 Bacterial regulatory proteins, tetR family VT48_18820 PF00067 Cytochrome P450 VT48_18825 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily VT48_18830 PF00772 DnaB-like helicase N terminal domain VT48_18830 PF03796 DnaB-like helicase C terminal domain VT48_18835 PF16226 Domain of unknown function (DUF4885) VT48_18845 PF00756 Putative esterase VT48_18850 PF01497 Periplasmic binding protein VT48_18850 PF12833 Helix-turn-helix domain VT48_18855 PF01497 Periplasmic binding protein VT48_18860 PF00756 Putative esterase VT48_18865 PF07690 Major Facilitator Superfamily VT48_18870 PF03948 Ribosomal protein L9, C-terminal domain VT48_18870 PF01281 Ribosomal protein L9, N-terminal domain VT48_18875 PF02272 DHHA1 domain VT48_18875 PF01368 DHH family VT48_18880 PF09991 Predicted membrane protein (DUF2232) VT48_18885 PF01368 DHH family VT48_18885 PF02833 DHHA2 domain VT48_18890 PF11738 Protein of unknown function (DUF3298) VT48_18890 PF13739 Deacetylase PdaC VT48_18895 PF08281 Sigma-70, region 4 VT48_18895 PF04542 Sigma-70 region 2 VT48_18905 PF00199 Catalase VT48_18905 PF06628 Catalase-related immune-responsive VT48_18910 PF03358 NADPH-dependent FMN reductase VT48_18915 PF01738 Dienelactone hydrolase family VT48_18920 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily VT48_18925 PF00528 Binding-protein-dependent transport system inner membrane component VT48_18930 PF00005 ABC transporter VT48_18930 PF00571 CBS domain VT48_18935 PF01084 Ribosomal protein S18 VT48_18940 PF00436 Single-strand binding protein family VT48_18945 PF01250 Ribosomal protein S6 VT48_18950 PF01926 50S ribosome-binding GTPase VT48_18950 PF06071 Protein of unknown function (DUF933) VT48_18955 PF06107 Bacterial protein of unknown function (DUF951) VT48_18975 PF06866 Protein of unknown function (DUF1256) VT48_18980 PF02195 ParB-like nuclease domain VT48_18980 PF17762 HTH domain found in ParB protein VT48_18985 PF13614 AAA domain VT48_18995 PF17762 HTH domain found in ParB protein VT48_18995 PF02195 ParB-like nuclease domain VT48_19000 PF02527 rRNA small subunit methyltransferase G VT48_19005 PF01134 Glucose inhibited division protein A VT48_19005 PF13932 GidA associated domain VT48_19010 PF12631 MnmE helical domain VT48_19010 PF10396 GTP-binding protein TrmE N-terminus VT48_19010 PF01926 50S ribosome-binding GTPase VT48_19015 PF14804 Jag N-terminus VT48_19015 PF01424 R3H domain VT48_19020 PF02096 60Kd inner membrane protein VT48_19025 PF00825 Ribonuclease P