A1R12_00005 SM00382 ATPases associated with a variety of cellular activities A1R12_00005 SM00760 Bacterial dnaA protein helix-turn-helix domain A1R12_00010 SM00480 DNA polymerase III beta subunit A1R12_00030 SM00387 Histidine kinase-like ATPases A1R12_00030 SM00433 TopoisomeraseII A1R12_00035 SM00434 DNA Topoisomerase IV A1R12_00060 SM00116 Domain in cystathionine beta-synthase and other proteins. A1R12_00060 SM01240 A1R12_00060 A1R12_00065 SM00936 Penicillin-binding protein 5, C-terminal domain A1R12_00105 SM00257 Lysin motif A1R12_00105 SM00636 A1R12_00105 A1R12_00125 SM00382 ATPases associated with a variety of cellular activities A1R12_00135 SM00493 A1R12_00135 A1R12_00220 SM00465 GIY-YIG type nucleases (URI domain) A1R12_00230 SM00966 SpoVT / AbrB like domain A1R12_00245 SM01208 A1R12_00245 A1R12_00250 SM00493 A1R12_00250 A1R12_00255 SM00650 Ribosomal RNA adenine dimethylases A1R12_00300 SM01400 A1R12_00300 A1R12_00320 SM00487 DEAD-like helicases superfamily A1R12_00320 SM00490 helicase superfamily c-terminal domain A1R12_00320 SM00982 A1R12_00320 A1R12_00320 SM01058 CarD-like/TRCF domain A1R12_00325 SM00966 SpoVT / AbrB like domain A1R12_00340 SM00363 S4 RNA-binding domain A1R12_00360 SM00316 Ribosomal protein S1-like RNA-binding domain A1R12_00375 SM00331 Sigma factor PP2C-like phosphatases A1R12_00375 SM00332 Serine/threonine phosphatases, family 2C, catalytic domain A1R12_00385 SM00220 Serine/Threonine protein kinases, catalytic domain A1R12_00390 SM00977 TilS substrate C-terminal domain A1R12_00400 SM00382 ATPases associated with a variety of cellular activities A1R12_00445 SM00905 Dihydroneopterin aldolase A1R12_00455 SM00530 Helix-turn-helix XRE-family like proteins A1R12_00565 SM00382 ATPases associated with a variety of cellular activities A1R12_00565 SM01086 C-terminal, D2-small domain, of ClpB protein A1R12_00570 SM00382 ATPases associated with a variety of cellular activities A1R12_00580 SM00670 Large family of predicted nucleotide-binding domains A1R12_00605 SM00840 A1R12_00605 A1R12_00610 SM00535 Ribonuclease III family A1R12_00615 SM00967 RNA 2'-O ribose methyltransferase substrate binding A1R12_00640 SM00738 In Spt5p, this domain may confer affinity for Spt4p. It possesses a RNP-like fold. A1R12_00640 SM00739 KOW (Kyprides, Ouzounis, Woese) motif. A1R12_00645 SM00649 Ribosomal protein L11/L12 A1R12_00675 SM00663 RNA polymerase I subunit A N-terminus A1R12_00695 SM00838 Elongation factor G C-terminus A1R12_00695 SM00889 Elongation factor G, domain IV A1R12_00710 SM01403 A1R12_00710 A1R12_00730 SM01382 A1R12_00730 A1R12_00730 SM01383 A1R12_00730 A1R12_00745 SM00322 K homology RNA-binding domain A1R12_00765 SM01374 A1R12_00765 A1R12_00770 SM00739 KOW (Kyprides, Ouzounis, Woese) motif. A1R12_00825 SM00316 Ribosomal protein S1-like RNA-binding domain A1R12_00845 SM00662 RNA polymerases D A1R12_00855 SM00382 ATPases associated with a variety of cellular activities A1R12_00860 SM00382 ATPases associated with a variety of cellular activities A1R12_00900 SM00646 A1R12_00900 A1R12_00915 SM01251 A1R12_00915 A1R12_01035 SM00829 Enoylreductase A1R12_01070 SM00342 helix_turn_helix, arabinose operon control protein A1R12_01180 SM00382 ATPases associated with a variety of cellular activities A1R12_01215 SM00347 helix_turn_helix multiple antibiotic resistance protein A1R12_01235 SM00421 helix_turn_helix, Lux Regulon A1R12_01235 SM00448 cheY-homologous receiver domain A1R12_01240 SM00382 ATPases associated with a variety of cellular activities A1R12_01335 SM00530 Helix-turn-helix XRE-family like proteins A1R12_01370 SM00450 Rhodanese Homology Domain A1R12_01405 SM00387 Histidine kinase-like ATPases A1R12_01410 SM00448 cheY-homologous receiver domain A1R12_01500 SM00870 A1R12_01500 A1R12_01540 SM00028 Tetratricopeptide repeats A1R12_01550 SM00642 Alpha-amylase domain A1R12_01560 SM00382 ATPases associated with a variety of cellular activities A1R12_01610 SM00116 Domain in cystathionine beta-synthase and other proteins. A1R12_01610 SM00382 ATPases associated with a variety of cellular activities A1R12_01640 SM00632 A1R12_01640 A1R12_01640 SM00642 Alpha-amylase domain A1R12_01655 SM00347 helix_turn_helix multiple antibiotic resistance protein A1R12_01765 SM00926 Molybdopterin oxidoreductase Fe4S4 domain A1R12_01780 SM00833 Cobalamin synthesis protein cobW C-terminal domain A1R12_01820 SM00934 Orotidine 5'-phosphate decarboxylase / HUMPS family A1R12_01835 SM00823 Phosphopantetheine attachment site A1R12_01840 SM00823 Phosphopantetheine attachment site A1R12_01845 SM00823 Phosphopantetheine attachment site A1R12_01885 SM00382 ATPases associated with a variety of cellular activities A1R12_01895 SM00062 Bacterial periplasmic substrate-binding proteins A1R12_01930 SM00710 Parallel beta-helix repeats A1R12_01930 SM00722 Domain present in carbohydrate binding proteins and sugar hydrolses A1R12_01965 SM00062 Bacterial periplasmic substrate-binding proteins A1R12_01975 SM00382 ATPases associated with a variety of cellular activities A1R12_01990 SM00382 ATPases associated with a variety of cellular activities A1R12_02000 SM00448 cheY-homologous receiver domain A1R12_02000 SM00862 Transcriptional regulatory protein, C terminal A1R12_02005 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain A1R12_02005 SM00387 Histidine kinase-like ATPases A1R12_02005 SM00388 His Kinase A (phosphoacceptor) domain A1R12_02010 SM00028 Tetratricopeptide repeats A1R12_02035 SM00382 ATPases associated with a variety of cellular activities A1R12_02065 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor A1R12_02070 SM00345 helix_turn_helix gluconate operon transcriptional repressor A1R12_02105 SM00420 helix_turn_helix, Deoxyribose operon repressor A1R12_02155 SM00796 Allophanate hydrolase subunit 1 A1R12_02160 SM00797 Allophanate hydrolase subunit 2 A1R12_02165 SM00346 helix_turn_helix isocitrate lyase regulation A1R12_02235 SM00344 helix_turn_helix ASNC type A1R12_02240 SM00436 Bacterial DNA topoisomeraes I ATP-binding domain A1R12_02240 SM00437 Bacterial DNA topoisomerase I DNA-binding domain A1R12_02240 SM00493 A1R12_02240 A1R12_02250 SM00267 diguanylate cyclase A1R12_02385 SM00091 PAS domain A1R12_02385 SM00387 Histidine kinase-like ATPases A1R12_02390 SM00448 cheY-homologous receiver domain A1R12_02405 SM00382 ATPases associated with a variety of cellular activities A1R12_02450 SM00487 DEAD-like helicases superfamily A1R12_02450 SM00490 helicase superfamily c-terminal domain A1R12_02480 SM01005 Alanine racemase, C-terminal domain A1R12_02505 SM00387 Histidine kinase-like ATPases A1R12_02510 SM00331 Sigma factor PP2C-like phosphatases A1R12_02530 SM00331 Sigma factor PP2C-like phosphatases A1R12_02530 SM00332 Serine/threonine phosphatases, family 2C, catalytic domain A1R12_02535 SM00316 Ribosomal protein S1-like RNA-binding domain A1R12_02535 SM00732 Likely ribonuclease with RNase H fold. A1R12_02540 SM00731 SprT homologues. A1R12_02590 SM00849 Metallo-beta-lactamase superfamily A1R12_02595 SM00344 helix_turn_helix ASNC type A1R12_02645 SM00357 Cold shock protein domain A1R12_02650 SM01058 CarD-like/TRCF domain A1R12_02720 SM01130 A1R12_02720 A1R12_02770 SM00829 Enoylreductase A1R12_02775 SM00422 helix_turn_helix, mercury resistance A1R12_02785 SM00345 helix_turn_helix gluconate operon transcriptional repressor A1R12_02815 SM00345 helix_turn_helix gluconate operon transcriptional repressor A1R12_02850 SM00387 Histidine kinase-like ATPases A1R12_02855 SM00421 helix_turn_helix, Lux Regulon A1R12_02855 SM00448 cheY-homologous receiver domain A1R12_02870 SM00382 ATPases associated with a variety of cellular activities A1R12_02895 SM00825 Beta-ketoacyl synthase A1R12_02900 SM00530 Helix-turn-helix XRE-family like proteins A1R12_02930 SM01329 A1R12_02930 A1R12_02935 SM00345 helix_turn_helix gluconate operon transcriptional repressor A1R12_02935 SM00895 A1R12_02935 A1R12_02970 SM00345 helix_turn_helix gluconate operon transcriptional repressor A1R12_02970 SM00866 A1R12_02970 A1R12_02975 SM00345 helix_turn_helix gluconate operon transcriptional repressor A1R12_02975 SM00895 A1R12_02975 A1R12_03015 SM00829 Enoylreductase A1R12_03080 SM00382 ATPases associated with a variety of cellular activities A1R12_03090 SM00881 CoA binding domain A1R12_03115 SM00883 Chaperonin 10 Kd subunit A1R12_03130 SM00028 Tetratricopeptide repeats A1R12_03130 SM00382 ATPases associated with a variety of cellular activities A1R12_03135 SM00829 Enoylreductase A1R12_03190 SM00829 Enoylreductase A1R12_03235 SM00460 Transglutaminase/protease-like homologues A1R12_03285 SM01001 AIR carboxylase A1R12_03295 SM00998 Adenylosuccinate lyase C-terminus A1R12_03310 SM01211 A1R12_03310 A1R12_03335 SM00798 AICARFT/IMPCHase bienzyme A1R12_03335 SM00851 MGS-like domain A1R12_03340 SM01209 A1R12_03340 A1R12_03340 SM01210 A1R12_03340 A1R12_03385 SM00278 Helix-hairpin-helix DNA-binding motif class 1 A1R12_03385 SM00292 breast cancer carboxy-terminal domain A1R12_03385 SM00532 Ligase N family A1R12_03420 SM00845 GatB domain A1R12_03435 SM00046 Diacylglycerol kinase catalytic domain (presumed) A1R12_03450 SM00382 ATPases associated with a variety of cellular activities A1R12_03545 SM00347 helix_turn_helix multiple antibiotic resistance protein A1R12_03575 SM00382 ATPases associated with a variety of cellular activities A1R12_03630 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). A1R12_03645 SM00382 ATPases associated with a variety of cellular activities A1R12_03650 SM00422 helix_turn_helix, mercury resistance A1R12_03660 SM00382 ATPases associated with a variety of cellular activities A1R12_03665 SM00487 DEAD-like helicases superfamily A1R12_03665 SM00490 helicase superfamily c-terminal domain A1R12_03675 SM00829 Enoylreductase A1R12_03690 SM00656 A1R12_03690 A1R12_03715 SM00387 Histidine kinase-like ATPases A1R12_03715 SM00388 His Kinase A (phosphoacceptor) domain A1R12_03715 SM00448 cheY-homologous receiver domain A1R12_03720 SM00448 cheY-homologous receiver domain A1R12_03720 SM00862 Transcriptional regulatory protein, C terminal A1R12_03735 SM00091 PAS domain A1R12_03735 SM00387 Histidine kinase-like ATPases A1R12_03740 SM00448 cheY-homologous receiver domain A1R12_03755 SM00849 Metallo-beta-lactamase superfamily A1R12_03825 SM00642 Alpha-amylase domain A1R12_03830 SM00345 helix_turn_helix gluconate operon transcriptional repressor A1R12_03830 SM00866 A1R12_03830 A1R12_03860 SM00354 helix_turn _helix lactose operon repressor A1R12_03885 SM00226 Low molecular weight phosphatase family A1R12_03950 SM00478 endonuclease III A1R12_03980 SM00861 Transketolase, pyrimidine binding domain A1R12_03995 SM00382 ATPases associated with a variety of cellular activities A1R12_04020 SM00382 ATPases associated with a variety of cellular activities A1R12_04025 SM00382 ATPases associated with a variety of cellular activities A1R12_04085 SM00347 helix_turn_helix multiple antibiotic resistance protein A1R12_04150 SM00287 Bacterial SH3 domain homologues A1R12_04180 SM00478 endonuclease III A1R12_04180 SM00525 A1R12_04180 A1R12_04210 SM00382 ATPases associated with a variety of cellular activities A1R12_04375 SM00382 ATPases associated with a variety of cellular activities A1R12_04380 SM00382 ATPases associated with a variety of cellular activities A1R12_04385 SM01060 A1R12_04385 A1R12_04395 SM00382 ATPases associated with a variety of cellular activities A1R12_04400 SM00062 Bacterial periplasmic substrate-binding proteins A1R12_04425 SM00530 Helix-turn-helix XRE-family like proteins A1R12_04440 SM00567 E-Z type HEAT repeats A1R12_04470 SM00763 PrkA AAA domain A1R12_04480 SM00347 helix_turn_helix multiple antibiotic resistance protein A1R12_04510 SM00345 helix_turn_helix gluconate operon transcriptional repressor A1R12_04515 SM00382 ATPases associated with a variety of cellular activities A1R12_04520 SM00382 ATPases associated with a variety of cellular activities A1R12_04530 SM00357 Cold shock protein domain A1R12_04540 SM00267 diguanylate cyclase A1R12_04590 SM00116 Domain in cystathionine beta-synthase and other proteins. A1R12_04640 SM00421 helix_turn_helix, Lux Regulon A1R12_04640 SM00448 cheY-homologous receiver domain A1R12_04660 SM00257 Lysin motif A1R12_04680 SM00098 Alkaline phosphatase homologues A1R12_04685 SM00257 Lysin motif A1R12_04730 SM00563 Phosphate acyltransferases A1R12_04735 SM01091 Transporter associated domain A1R12_04740 SM00422 helix_turn_helix, mercury resistance A1R12_04750 SM00825 Beta-ketoacyl synthase A1R12_04755 SM01091 Transporter associated domain A1R12_04810 SM00382 ATPases associated with a variety of cellular activities A1R12_04815 SM00382 ATPases associated with a variety of cellular activities A1R12_04865 SM00729 Elongator protein 3, MiaB family, Radical SAM A1R12_04900 SM00382 ATPases associated with a variety of cellular activities A1R12_04920 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. A1R12_04955 SM00347 helix_turn_helix multiple antibiotic resistance protein A1R12_04985 SM00382 ATPases associated with a variety of cellular activities A1R12_05065 SM00849 Metallo-beta-lactamase superfamily A1R12_05110 SM00855 Phosphoglycerate mutase family A1R12_05130 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). A1R12_05145 SM00914 A1R12_05145 A1R12_05175 SM00894 Excalibur calcium-binding domain A1R12_05215 SM00347 helix_turn_helix multiple antibiotic resistance protein A1R12_05340 SM00342 helix_turn_helix, arabinose operon control protein A1R12_05355 SM00345 helix_turn_helix gluconate operon transcriptional repressor A1R12_05380 SM00316 Ribosomal protein S1-like RNA-binding domain A1R12_05390 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). A1R12_05390 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain A1R12_05450 SM00859 Semialdehyde dehydrogenase, NAD binding domain A1R12_05470 SM01097 Carbamoyl-phosphate synthase small chain, CPSase domain A1R12_05475 SM01096 Carbamoyl-phosphate synthetase large chain, oligomerisation domain A1R12_05530 SM00825 Beta-ketoacyl synthase A1R12_05540 SM00382 ATPases associated with a variety of cellular activities A1R12_05545 SM00382 ATPases associated with a variety of cellular activities A1R12_05590 SM00382 ATPases associated with a variety of cellular activities A1R12_05595 SM00382 ATPases associated with a variety of cellular activities A1R12_05650 SM01118 A1R12_05650 A1R12_05660 SM00954 Region found in RelA / SpoT proteins A1R12_05785 SM00849 Metallo-beta-lactamase superfamily A1R12_05795 SM00382 ATPases associated with a variety of cellular activities A1R12_05800 SM00966 SpoVT / AbrB like domain A1R12_05955 SM00347 helix_turn_helix multiple antibiotic resistance protein A1R12_05995 SM00420 helix_turn_helix, Deoxyribose operon repressor A1R12_05995 SM01134 A1R12_05995 A1R12_06040 SM00926 Molybdopterin oxidoreductase Fe4S4 domain A1R12_06040 SM00929 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region A1R12_06075 SM00382 ATPases associated with a variety of cellular activities A1R12_06110 SM00354 helix_turn _helix lactose operon repressor A1R12_06120 SM00858 A1R12_06120 A1R12_06135 SM00028 Tetratricopeptide repeats A1R12_06140 SM00257 Lysin motif A1R12_06140 SM00644 A1R12_06140 A1R12_06165 SM00530 Helix-turn-helix XRE-family like proteins A1R12_06180 SM00382 ATPases associated with a variety of cellular activities A1R12_06270 SM00257 Lysin motif A1R12_06335 SM00257 Lysin motif A1R12_06335 SM00644 A1R12_06335 A1R12_06380 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. A1R12_06405 SM00382 ATPases associated with a variety of cellular activities A1R12_06420 SM00922 Mandelate racemase / muconate lactonizing enzyme, C-terminal domain A1R12_06430 SM00382 ATPases associated with a variety of cellular activities A1R12_06470 SM00359 Putative RNA-binding Domain in PseudoUridine synthase and Archaeosine transglycosylase A1R12_06485 SM00347 helix_turn_helix multiple antibiotic resistance protein A1R12_06505 SM00028 Tetratricopeptide repeats A1R12_06520 SM00100 Cyclic nucleotide-monophosphate binding domain A1R12_06545 SM00382 ATPases associated with a variety of cellular activities A1R12_06555 SM00257 Lysin motif A1R12_06555 SM00636 A1R12_06555 A1R12_06560 SM00116 Domain in cystathionine beta-synthase and other proteins. A1R12_06560 SM00924 MgtE intracellular N domain A1R12_06565 SM00422 helix_turn_helix, mercury resistance A1R12_06575 SM00347 helix_turn_helix multiple antibiotic resistance protein A1R12_06590 SM00559 Ku70 and Ku80 are 70kDa and 80kDa subunits of the Lupus Ku autoantigen A1R12_06645 SM00091 PAS domain A1R12_06645 SM00387 Histidine kinase-like ATPases A1R12_06645 SM00388 His Kinase A (phosphoacceptor) domain A1R12_06685 SM01007 Class II Aldolase and Adducin N-terminal domain A1R12_06700 SM00387 Histidine kinase-like ATPases A1R12_06700 SM00388 His Kinase A (phosphoacceptor) domain A1R12_06705 SM00347 helix_turn_helix multiple antibiotic resistance protein A1R12_06720 SM00382 ATPases associated with a variety of cellular activities A1R12_06720 SM01086 C-terminal, D2-small domain, of ClpB protein A1R12_06760 SM00822 A1R12_06760 A1R12_06810 SM00354 helix_turn _helix lactose operon repressor A1R12_06815 SM01061 CAT RNA binding domain A1R12_06845 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). A1R12_06845 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain A1R12_06865 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) A1R12_06865 SM00091 PAS domain A1R12_06865 SM00387 Histidine kinase-like ATPases A1R12_06865 SM00388 His Kinase A (phosphoacceptor) domain A1R12_06875 SM00260 Two component signalling adaptor domain A1R12_06875 SM00448 cheY-homologous receiver domain A1R12_06890 SM00257 Lysin motif A1R12_06910 SM00052 Putative diguanylate phosphodiesterase A1R12_07000 SM00852 Probable molybdopterin binding domain A1R12_07030 SM00382 ATPases associated with a variety of cellular activities A1R12_07040 SM00420 helix_turn_helix, Deoxyribose operon repressor A1R12_07040 SM01134 A1R12_07040 A1R12_07065 SM00382 ATPases associated with a variety of cellular activities A1R12_07090 SM00966 SpoVT / AbrB like domain A1R12_07095 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) A1R12_07095 SM00091 PAS domain A1R12_07095 SM00387 Histidine kinase-like ATPases A1R12_07095 SM00388 His Kinase A (phosphoacceptor) domain A1R12_07115 SM00849 Metallo-beta-lactamase superfamily A1R12_07150 SM00827 Acyl transferase domain in polyketide synthase (PKS) enzymes. A1R12_07155 SM00822 A1R12_07155 A1R12_07155 SM00823 Phosphopantetheine attachment site A1R12_07155 SM00825 Beta-ketoacyl synthase A1R12_07155 SM00826 A1R12_07155 A1R12_07155 SM01294 A1R12_07155 A1R12_07160 SM00822 A1R12_07160 A1R12_07160 SM00823 Phosphopantetheine attachment site A1R12_07160 SM00825 Beta-ketoacyl synthase A1R12_07160 SM00826 A1R12_07160 A1R12_07165 SM00822 A1R12_07165 A1R12_07165 SM00823 Phosphopantetheine attachment site A1R12_07165 SM00825 Beta-ketoacyl synthase A1R12_07165 SM01294 A1R12_07165 A1R12_07170 SM00822 A1R12_07170 A1R12_07170 SM00823 Phosphopantetheine attachment site A1R12_07170 SM00825 Beta-ketoacyl synthase A1R12_07170 SM01294 A1R12_07170 A1R12_07175 SM00822 A1R12_07175 A1R12_07175 SM00823 Phosphopantetheine attachment site A1R12_07175 SM00825 Beta-ketoacyl synthase A1R12_07175 SM01294 A1R12_07175 A1R12_07180 SM00822 A1R12_07180 A1R12_07180 SM00823 Phosphopantetheine attachment site A1R12_07180 SM00825 Beta-ketoacyl synthase A1R12_07180 SM01294 A1R12_07180 A1R12_07185 SM00822 A1R12_07185 A1R12_07185 SM00823 Phosphopantetheine attachment site A1R12_07185 SM01294 A1R12_07185 A1R12_07200 SM00861 Transketolase, pyrimidine binding domain A1R12_07290 SM00838 Elongation factor G C-terminus A1R12_07310 SM00670 Large family of predicted nucleotide-binding domains A1R12_07335 SM00878 Biotin carboxylase C-terminal domain A1R12_07380 SM00116 Domain in cystathionine beta-synthase and other proteins. A1R12_07480 SM00740 A1R12_07480 A1R12_07485 SM00740 A1R12_07485 A1R12_07525 SM00842 Cell division protein FtsA A1R12_07530 SM00864 Tubulin/FtsZ family, GTPase domain A1R12_07530 SM00865 Tubulin/FtsZ family, C-terminal domain A1R12_07555 SM00382 ATPases associated with a variety of cellular activities A1R12_07590 SM00363 S4 RNA-binding domain A1R12_07620 SM00363 S4 RNA-binding domain A1R12_07645 SM01097 Carbamoyl-phosphate synthase small chain, CPSase domain A1R12_07650 SM00851 MGS-like domain A1R12_07650 SM01096 Carbamoyl-phosphate synthetase large chain, oligomerisation domain A1R12_07650 SM01209 A1R12_07650 A1R12_07665 SM00934 Orotidine 5'-phosphate decarboxylase / HUMPS family A1R12_07715 SM00831 Cation transporter/ATPase, N-terminus A1R12_07730 SM00072 Guanylate kinase homologues. A1R12_07735 SM01409 A1R12_07735 A1R12_07745 SM00487 DEAD-like helicases superfamily A1R12_07745 SM00490 helicase superfamily c-terminal domain A1R12_07770 SM00331 Sigma factor PP2C-like phosphatases A1R12_07770 SM00332 Serine/threonine phosphatases, family 2C, catalytic domain A1R12_07775 SM00220 Serine/Threonine protein kinases, catalytic domain A1R12_07775 SM00740 A1R12_07775 A1R12_07790 SM00983 Thiamin pyrophosphokinase, vitamin B1 binding domain A1R12_07810 SM01120 A1R12_07810 A1R12_07810 SM01121 A1R12_07810 A1R12_07825 SM00487 DEAD-like helicases superfamily A1R12_07825 SM00490 helicase superfamily c-terminal domain A1R12_07840 SM00827 Acyl transferase domain in polyketide synthase (PKS) enzymes. A1R12_07845 SM00822 A1R12_07845 A1R12_07855 SM00358 Double-stranded RNA binding motif A1R12_07855 SM00535 Ribonuclease III family A1R12_07860 SM00968 SMC proteins Flexible Hinge Domain A1R12_07865 SM00382 ATPases associated with a variety of cellular activities A1R12_07865 SM00962 SRP54-type protein, GTPase domain A1R12_07865 SM00963 SRP54-type protein, helical bundle domain A1R12_07880 SM00382 ATPases associated with a variety of cellular activities A1R12_07880 SM00962 SRP54-type protein, GTPase domain A1R12_07880 SM00963 SRP54-type protein, helical bundle domain A1R12_07940 SM00881 CoA binding domain A1R12_07950 SM00436 Bacterial DNA topoisomeraes I ATP-binding domain A1R12_07950 SM00437 Bacterial DNA topoisomerase I DNA-binding domain A1R12_07950 SM00493 A1R12_07950 A1R12_07970 SM00382 ATPases associated with a variety of cellular activities A1R12_07970 SM01086 C-terminal, D2-small domain, of ClpB protein A1R12_08010 SM00382 ATPases associated with a variety of cellular activities A1R12_08060 SM00448 cheY-homologous receiver domain A1R12_08095 SM00962 SRP54-type protein, GTPase domain A1R12_08105 SM00448 cheY-homologous receiver domain A1R12_08110 SM00073 Histidine Phosphotransfer domain A1R12_08110 SM00260 Two component signalling adaptor domain A1R12_08110 SM00387 Histidine kinase-like ATPases A1R12_08110 SM01231 A1R12_08110 A1R12_08115 SM00260 Two component signalling adaptor domain A1R12_08175 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. A1R12_08185 SM00479 A1R12_08185 A1R12_08185 SM00481 DNA polymerase alpha chain like domain A1R12_08195 SM00316 Ribosomal protein S1-like RNA-binding domain A1R12_08195 SM00322 K homology RNA-binding domain A1R12_08230 SM00904 Riboflavin kinase A1R12_08235 SM01387 A1R12_08235 A1R12_08240 SM00316 Ribosomal protein S1-like RNA-binding domain A1R12_08240 SM00322 K homology RNA-binding domain A1R12_08270 SM00859 Semialdehyde dehydrogenase, NAD binding domain A1R12_08280 SM01130 A1R12_08280 A1R12_08285 SM00849 Metallo-beta-lactamase superfamily A1R12_08300 SM00382 ATPases associated with a variety of cellular activities A1R12_08300 SM00843 A1R12_08300 A1R12_08305 SM00345 helix_turn_helix gluconate operon transcriptional repressor A1R12_08305 SM00866 A1R12_08305 A1R12_08315 SM00347 helix_turn_helix multiple antibiotic resistance protein A1R12_08350 SM00530 Helix-turn-helix XRE-family like proteins A1R12_08360 SM00852 Probable molybdopterin binding domain A1R12_08365 SM00382 ATPases associated with a variety of cellular activities A1R12_08375 SM00322 K homology RNA-binding domain A1R12_08375 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. A1R12_08390 SM00829 Enoylreductase A1R12_08400 SM00729 Elongator protein 3, MiaB family, Radical SAM A1R12_08415 SM00533 DNA-binding domain of DNA mismatch repair MUTS family A1R12_08415 SM00534 ATPase domain of DNA mismatch repair MUTS family A1R12_08420 SM00853 MutL C terminal dimerisation domain A1R12_08420 SM01340 A1R12_08420 A1R12_08435 SM00507 HNH nucleases A1R12_08460 SM00849 Metallo-beta-lactamase superfamily A1R12_08465 SM00827 Acyl transferase domain in polyketide synthase (PKS) enzymes. A1R12_08470 SM00827 Acyl transferase domain in polyketide synthase (PKS) enzymes. A1R12_08475 SM00827 Acyl transferase domain in polyketide synthase (PKS) enzymes. A1R12_08500 SM00822 A1R12_08500 A1R12_08500 SM00823 Phosphopantetheine attachment site A1R12_08500 SM00825 Beta-ketoacyl synthase A1R12_08500 SM00826 A1R12_08500 A1R12_08500 SM01294 A1R12_08500 A1R12_08505 SM00822 A1R12_08505 A1R12_08505 SM00823 Phosphopantetheine attachment site A1R12_08505 SM00825 Beta-ketoacyl synthase A1R12_08505 SM00826 A1R12_08505 A1R12_08505 SM01294 A1R12_08505 A1R12_08510 SM00822 A1R12_08510 A1R12_08510 SM00823 Phosphopantetheine attachment site A1R12_08510 SM00825 Beta-ketoacyl synthase A1R12_08510 SM00826 A1R12_08510 A1R12_08510 SM01294 A1R12_08510 A1R12_08515 SM00822 A1R12_08515 A1R12_08515 SM00823 Phosphopantetheine attachment site A1R12_08515 SM00825 Beta-ketoacyl synthase A1R12_08515 SM00826 A1R12_08515 A1R12_08515 SM01294 A1R12_08515 A1R12_08520 SM00823 Phosphopantetheine attachment site A1R12_08520 SM00825 Beta-ketoacyl synthase A1R12_08520 SM01294 A1R12_08520 A1R12_08625 SM00646 A1R12_08625 A1R12_08635 SM00382 ATPases associated with a variety of cellular activities A1R12_08650 SM00422 helix_turn_helix, mercury resistance A1R12_08655 SM01230 A1R12_08655 A1R12_08725 SM00829 Enoylreductase A1R12_08770 SM00710 Parallel beta-helix repeats A1R12_08805 SM00257 Lysin motif A1R12_08810 SM00857 Resolvase, N terminal domain A1R12_08820 SM00861 Transketolase, pyrimidine binding domain A1R12_08845 SM00448 cheY-homologous receiver domain A1R12_08915 SM01207 A1R12_08915 A1R12_08920 SM00881 CoA binding domain A1R12_08925 SM00387 Histidine kinase-like ATPases A1R12_08925 SM00433 TopoisomeraseII A1R12_08930 SM00434 DNA Topoisomerase IV A1R12_08950 SM00829 Enoylreductase A1R12_08970 SM00354 helix_turn _helix lactose operon repressor A1R12_09010 SM00028 Tetratricopeptide repeats A1R12_09035 SM00382 ATPases associated with a variety of cellular activities A1R12_09055 SM01067 Cellulose binding domain A1R12_09065 SM00387 Histidine kinase-like ATPases A1R12_09065 SM00388 His Kinase A (phosphoacceptor) domain A1R12_09070 SM00448 cheY-homologous receiver domain A1R12_09070 SM00862 Transcriptional regulatory protein, C terminal A1R12_09080 SM00606 Cellulose Binding Domain Type IV A1R12_09085 SM00823 Phosphopantetheine attachment site A1R12_09085 SM00824 Thioesterase A1R12_09090 SM00823 Phosphopantetheine attachment site A1R12_09095 SM00823 Phosphopantetheine attachment site A1R12_09095 SM00825 Beta-ketoacyl synthase A1R12_09100 SM00827 Acyl transferase domain in polyketide synthase (PKS) enzymes. A1R12_09110 SM00822 A1R12_09110 A1R12_09115 SM00882 Coenzyme A transferase A1R12_09120 SM00882 Coenzyme A transferase A1R12_09135 SM00729 Elongator protein 3, MiaB family, Radical SAM A1R12_09135 SM00876 Biotin and Thiamin Synthesis associated domain A1R12_09195 SM00878 Biotin carboxylase C-terminal domain A1R12_09225 SM00823 Phosphopantetheine attachment site A1R12_09230 SM00823 Phosphopantetheine attachment site A1R12_09235 SM00823 Phosphopantetheine attachment site A1R12_09235 SM01294 A1R12_09235 A1R12_09240 SM00823 Phosphopantetheine attachment site A1R12_09290 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor A1R12_09305 SM00829 Enoylreductase A1R12_09325 SM00359 Putative RNA-binding Domain in PseudoUridine synthase and Archaeosine transglycosylase A1R12_09340 SM00822 A1R12_09340 A1R12_09370 SM00926 Molybdopterin oxidoreductase Fe4S4 domain A1R12_09385 SM00347 helix_turn_helix multiple antibiotic resistance protein A1R12_09395 SM00860 SMI1 / KNR4 family A1R12_09410 SM00342 helix_turn_helix, arabinose operon control protein A1R12_09420 SM00849 Metallo-beta-lactamase superfamily A1R12_09430 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor A1R12_09465 SM00257 Lysin motif A1R12_09470 SM00341 Helicase and RNase D C-terminal A1R12_09470 SM00487 DEAD-like helicases superfamily A1R12_09470 SM00490 helicase superfamily c-terminal domain A1R12_09470 SM00956 A1R12_09470 A1R12_09550 SM00849 Metallo-beta-lactamase superfamily A1R12_09560 SM00861 Transketolase, pyrimidine binding domain A1R12_09565 SM00327 von Willebrand factor (vWF) type A domain A1R12_09570 SM00382 ATPases associated with a variety of cellular activities A1R12_09580 SM00257 Lysin motif A1R12_09685 SM00345 helix_turn_helix gluconate operon transcriptional repressor A1R12_09685 SM00866 A1R12_09685 A1R12_09690 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. A1R12_09690 SM00245 tail specific protease A1R12_09720 SM00014 Acid phosphatase homologues A1R12_09760 SM00882 Coenzyme A transferase A1R12_09765 SM00882 Coenzyme A transferase A1R12_09775 SM00871 Bacterial transcription activator, effector binding domain A1R12_09860 SM00860 SMI1 / KNR4 family A1R12_09870 SM00860 SMI1 / KNR4 family A1R12_09875 SM00318 Staphylococcal nuclease homologues A1R12_09875 SM00894 Excalibur calcium-binding domain A1R12_09880 SM00857 Resolvase, N terminal domain A1R12_09900 SM00347 helix_turn_helix multiple antibiotic resistance protein A1R12_09930 SM00382 ATPases associated with a variety of cellular activities A1R12_09975 SM00567 E-Z type HEAT repeats A1R12_09975 SM00932 Scaffold protein Nfu/NifU N terminal A1R12_09980 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. A1R12_10000 SM00357 Cold shock protein domain A1R12_10040 SM00279 Helix-hairpin-helix class 2 (Pol1 family) motifs A1R12_10040 SM00475 5'-3' exonuclease A1R12_10120 SM00644 A1R12_10120 A1R12_10145 SM00710 Parallel beta-helix repeats A1R12_10150 SM00047 Lysozyme subfamily 2 A1R12_10225 SM00507 HNH nucleases A1R12_10275 SM00382 ATPases associated with a variety of cellular activities A1R12_10330 SM00530 Helix-turn-helix XRE-family like proteins A1R12_10355 SM00491 A1R12_10355 A1R12_10365 SM00981 A1R12_10365 A1R12_10390 SM00487 DEAD-like helicases superfamily A1R12_10390 SM00490 helicase superfamily c-terminal domain A1R12_10440 SM00060 Fibronectin type 3 domain A1R12_10460 SM00478 endonuclease III A1R12_10460 SM00525 A1R12_10460 A1R12_10485 SM00479 A1R12_10485 A1R12_10485 SM00487 DEAD-like helicases superfamily A1R12_10485 SM00491 A1R12_10485 A1R12_10525 SM00851 MGS-like domain A1R12_10545 SM00835 Cupin A1R12_10580 SM00914 A1R12_10580 A1R12_10585 SM00028 Tetratricopeptide repeats A1R12_10650 SM00138 Methyltransferase, chemotaxis proteins A1R12_10655 SM00562 A1R12_10655 A1R12_10685 SM00411 bacterial (prokaryotic) histone like domain A1R12_10725 SM00316 Ribosomal protein S1-like RNA-binding domain A1R12_10760 SM00839 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase A1R12_10780 SM00257 Lysin motif A1R12_10790 SM00487 DEAD-like helicases superfamily A1R12_10790 SM00490 helicase superfamily c-terminal domain A1R12_10825 SM00091 PAS domain A1R12_10825 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain A1R12_10825 SM00387 Histidine kinase-like ATPases A1R12_10825 SM00388 His Kinase A (phosphoacceptor) domain A1R12_10830 SM00448 cheY-homologous receiver domain A1R12_10830 SM00862 Transcriptional regulatory protein, C terminal A1R12_10850 SM00363 S4 RNA-binding domain A1R12_10865 SM00936 Penicillin-binding protein 5, C-terminal domain A1R12_10985 SM00387 Histidine kinase-like ATPases A1R12_10995 SM00936 Penicillin-binding protein 5, C-terminal domain A1R12_11040 SM00919 Malic enzyme, NAD binding domain A1R12_11040 SM01274 A1R12_11040 A1R12_11055 SM00870 A1R12_11055 A1R12_11060 SM00530 Helix-turn-helix XRE-family like proteins A1R12_11160 SM00849 Metallo-beta-lactamase superfamily A1R12_11185 SM00823 Phosphopantetheine attachment site A1R12_11185 SM00825 Beta-ketoacyl synthase A1R12_11185 SM00829 Enoylreductase A1R12_11185 SM01294 A1R12_11185 A1R12_11190 SM00822 A1R12_11190 A1R12_11190 SM00823 Phosphopantetheine attachment site A1R12_11190 SM00825 Beta-ketoacyl synthase A1R12_11190 SM00826 A1R12_11190 A1R12_11195 SM00822 A1R12_11195 A1R12_11195 SM00823 Phosphopantetheine attachment site A1R12_11195 SM00825 Beta-ketoacyl synthase A1R12_11195 SM01294 A1R12_11195 A1R12_11200 SM00822 A1R12_11200 A1R12_11200 SM00823 Phosphopantetheine attachment site A1R12_11200 SM00825 Beta-ketoacyl synthase A1R12_11200 SM01294 A1R12_11200 A1R12_11210 SM00822 A1R12_11210 A1R12_11210 SM00823 Phosphopantetheine attachment site A1R12_11210 SM00825 Beta-ketoacyl synthase A1R12_11210 SM00826 A1R12_11210 A1R12_11210 SM01294 A1R12_11210 A1R12_11215 SM00822 A1R12_11215 A1R12_11215 SM00823 Phosphopantetheine attachment site A1R12_11215 SM00825 Beta-ketoacyl synthase A1R12_11215 SM01294 A1R12_11215 A1R12_11245 SM00827 Acyl transferase domain in polyketide synthase (PKS) enzymes. A1R12_11250 SM00738 In Spt5p, this domain may confer affinity for Spt4p. It possesses a RNP-like fold. A1R12_11285 SM01350 A1R12_11285 A1R12_11330 SM00382 ATPases associated with a variety of cellular activities A1R12_11340 SM00062 Bacterial periplasmic substrate-binding proteins A1R12_11340 SM00079 Eukaryotic homologues of bacterial periplasmic substrate binding proteins. A1R12_11350 SM00046 Diacylglycerol kinase catalytic domain (presumed) A1R12_11360 SM00861 Transketolase, pyrimidine binding domain A1R12_11380 SM00839 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase A1R12_11390 SM00091 PAS domain A1R12_11390 SM00382 ATPases associated with a variety of cellular activities A1R12_11435 SM00646 A1R12_11435 A1R12_11450 SM00530 Helix-turn-helix XRE-family like proteins A1R12_11475 SM01005 Alanine racemase, C-terminal domain A1R12_11480 SM00448 cheY-homologous receiver domain A1R12_11485 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. A1R12_11500 SM00363 S4 RNA-binding domain A1R12_11505 SM00861 Transketolase, pyrimidine binding domain A1R12_11540 SM00878 Biotin carboxylase C-terminal domain A1R12_11585 SM00382 ATPases associated with a variety of cellular activities A1R12_11595 SM00841 Elongation factor P, C-terminal A1R12_11595 SM01185 A1R12_11595 A1R12_11625 SM00529 Helix-turn-helix diphteria tox regulatory element A1R12_11635 SM00450 Rhodanese Homology Domain A1R12_11655 SM00487 DEAD-like helicases superfamily A1R12_11655 SM00490 helicase superfamily c-terminal domain A1R12_11670 SM00530 Helix-turn-helix XRE-family like proteins A1R12_11730 SM00382 ATPases associated with a variety of cellular activities A1R12_11740 SM01091 Transporter associated domain A1R12_11765 SM00849 Metallo-beta-lactamase superfamily A1R12_11780 SM00631 A1R12_11780 A1R12_11815 SM00382 ATPases associated with a variety of cellular activities A1R12_11820 SM00382 ATPases associated with a variety of cellular activities A1R12_11870 SM00257 Lysin motif A1R12_11905 SM00518 AP endonuclease family 2 A1R12_11910 SM00487 DEAD-like helicases superfamily A1R12_11910 SM00490 helicase superfamily c-terminal domain A1R12_11945 SM00400 zinc finger A1R12_11945 SM00493 A1R12_11945 A1R12_11960 SM00116 Domain in cystathionine beta-synthase and other proteins. A1R12_12000 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. A1R12_12050 SM00729 Elongator protein 3, MiaB family, Radical SAM A1R12_12065 SM00271 DnaJ molecular chaperone homology domain A1R12_12085 SM00729 Elongator protein 3, MiaB family, Radical SAM A1R12_12090 SM00838 Elongation factor G C-terminus A1R12_12120 SM00849 Metallo-beta-lactamase superfamily A1R12_12130 SM00278 Helix-hairpin-helix DNA-binding motif class 1 A1R12_12150 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. A1R12_12160 SM01103 A1R12_12160 A1R12_12235 SM00422 helix_turn_helix, mercury resistance A1R12_12260 SM00388 His Kinase A (phosphoacceptor) domain A1R12_12265 SM00448 cheY-homologous receiver domain A1R12_12265 SM00862 Transcriptional regulatory protein, C terminal A1R12_12350 SM00849 Metallo-beta-lactamase superfamily A1R12_12400 SM00926 Molybdopterin oxidoreductase Fe4S4 domain A1R12_12400 SM00929 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region A1R12_12485 SM00732 Likely ribonuclease with RNase H fold. A1R12_12495 SM00863 Threonyl and Alanyl tRNA synthetase second additional domain A1R12_12505 SM00382 ATPases associated with a variety of cellular activities A1R12_12510 SM00062 Bacterial periplasmic substrate-binding proteins A1R12_12510 SM00079 Eukaryotic homologues of bacterial periplasmic substrate binding proteins. A1R12_12535 SM00382 ATPases associated with a variety of cellular activities A1R12_12540 SM00028 Tetratricopeptide repeats A1R12_12560 SM00382 ATPases associated with a variety of cellular activities A1R12_12585 SM00287 Bacterial SH3 domain homologues A1R12_12585 SM00646 A1R12_12585 A1R12_12595 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. A1R12_12595 SM00954 Region found in RelA / SpoT proteins A1R12_12645 SM01323 A1R12_12645 A1R12_12665 SM00382 ATPases associated with a variety of cellular activities A1R12_12670 SM00278 Helix-hairpin-helix DNA-binding motif class 1 A1R12_12690 SM00257 Lysin motif A1R12_12735 SM01317 A1R12_12735 A1R12_12830 SM00257 Lysin motif A1R12_12840 SM01004 Delta-aminolevulinic acid dehydratase A1R12_12875 SM00382 ATPases associated with a variety of cellular activities A1R12_12875 SM00464 Found in ATP-dependent protease La (LON) A1R12_12880 SM00382 ATPases associated with a variety of cellular activities A1R12_12885 SM00382 ATPases associated with a variety of cellular activities A1R12_12885 SM00994 ClpX C4-type zinc finger A1R12_12885 SM01086 C-terminal, D2-small domain, of ClpB protein A1R12_12910 SM01329 A1R12_12910 A1R12_12915 SM00917 LeuA allosteric (dimerisation) domain A1R12_12960 SM00487 DEAD-like helicases superfamily A1R12_12960 SM00490 helicase superfamily c-terminal domain A1R12_12995 SM00909 Sporulation and spore germination A1R12_13005 SM00347 helix_turn_helix multiple antibiotic resistance protein A1R12_13010 SM00421 helix_turn_helix, Lux Regulon A1R12_13045 SM00465 GIY-YIG type nucleases (URI domain) A1R12_13055 SM00813 Alpha-L-arabinofuranosidase C-terminus A1R12_13060 SM00893 Electron transfer flavoprotein domain A1R12_13065 SM00893 Electron transfer flavoprotein domain A1R12_13095 SM00463 Small MutS-related domain A1R12_13095 SM00533 DNA-binding domain of DNA mismatch repair MUTS family A1R12_13095 SM00534 ATPase domain of DNA mismatch repair MUTS family A1R12_13100 SM00278 Helix-hairpin-helix DNA-binding motif class 1 A1R12_13100 SM00481 DNA polymerase alpha chain like domain A1R12_13100 SM00483 DNA polymerase X family A1R12_13120 SM00873 B3/4 domain A1R12_13120 SM00874 tRNA synthetase B5 domain A1R12_13120 SM00896 Ferredoxin-fold anticodon binding domain A1R12_13130 SM00967 RNA 2'-O ribose methyltransferase substrate binding A1R12_13160 SM00813 Alpha-L-arabinofuranosidase C-terminus A1R12_13190 SM01007 Class II Aldolase and Adducin N-terminal domain A1R12_13250 SM00448 cheY-homologous receiver domain A1R12_13250 SM00850 LytTr DNA-binding domain A1R12_13255 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. A1R12_13255 SM00387 Histidine kinase-like ATPases A1R12_13265 SM00863 Threonyl and Alanyl tRNA synthetase second additional domain A1R12_13280 SM00382 ATPases associated with a variety of cellular activities A1R12_13300 SM00846 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain A1R12_13330 SM00898 Formamidopyrimidine-DNA glycosylase N-terminal domain A1R12_13330 SM01232 A1R12_13330 A1R12_13335 SM00279 Helix-hairpin-helix class 2 (Pol1 family) motifs A1R12_13335 SM00474 3'-5' exonuclease A1R12_13335 SM00475 5'-3' exonuclease A1R12_13335 SM00482 DNA polymerase A domain A1R12_13340 SM00091 PAS domain A1R12_13340 SM00387 Histidine kinase-like ATPases A1R12_13340 SM00388 His Kinase A (phosphoacceptor) domain A1R12_13345 SM00448 cheY-homologous receiver domain A1R12_13345 SM00862 Transcriptional regulatory protein, C terminal A1R12_13355 SM01329 A1R12_13355 A1R12_13410 SM00919 Malic enzyme, NAD binding domain A1R12_13410 SM01274 A1R12_13410 A1R12_13415 SM00481 DNA polymerase alpha chain like domain A1R12_13445 SM00116 Domain in cystathionine beta-synthase and other proteins. A1R12_13450 SM00849 Metallo-beta-lactamase superfamily A1R12_13470 SM00852 Probable molybdopterin binding domain A1R12_13530 SM00981 A1R12_13530 A1R12_13565 SM00267 diguanylate cyclase A1R12_13570 SM00363 S4 RNA-binding domain A1R12_13570 SM01390 A1R12_13570 A1R12_13580 SM00860 SMI1 / KNR4 family A1R12_13630 SM00363 S4 RNA-binding domain A1R12_13645 SM00116 Domain in cystathionine beta-synthase and other proteins. A1R12_13665 SM00354 helix_turn _helix lactose operon repressor A1R12_13670 SM00830 Chorismate mutase type II A1R12_13695 SM00382 ATPases associated with a variety of cellular activities A1R12_13695 SM00843 A1R12_13695 A1R12_13730 SM00919 Malic enzyme, NAD binding domain A1R12_13730 SM01274 A1R12_13730 A1R12_13735 SM00849 Metallo-beta-lactamase superfamily A1R12_13755 SM00046 Diacylglycerol kinase catalytic domain (presumed) A1R12_13790 SM00382 ATPases associated with a variety of cellular activities A1R12_13795 SM00420 helix_turn_helix, Deoxyribose operon repressor A1R12_13800 SM00363 S4 RNA-binding domain A1R12_13825 SM00354 helix_turn _helix lactose operon repressor A1R12_13855 SM00450 Rhodanese Homology Domain A1R12_13870 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) A1R12_13870 SM00091 PAS domain A1R12_13890 SM00382 ATPases associated with a variety of cellular activities A1R12_13895 SM00387 Histidine kinase-like ATPases A1R12_13900 SM00448 cheY-homologous receiver domain A1R12_13900 SM00862 Transcriptional regulatory protein, C terminal A1R12_13910 SM00382 ATPases associated with a variety of cellular activities A1R12_13930 SM00382 ATPases associated with a variety of cellular activities A1R12_13935 SM00345 helix_turn_helix gluconate operon transcriptional repressor A1R12_13945 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor A1R12_13955 SM00729 Elongator protein 3, MiaB family, Radical SAM A1R12_14025 SM00382 ATPases associated with a variety of cellular activities A1R12_14065 SM01234 A1R12_14065 A1R12_14070 SM00947 Carbonic anhydrase A1R12_14100 SM00922 Mandelate racemase / muconate lactonizing enzyme, C-terminal domain A1R12_14275 SM00244 prohibitin homologues A1R12_14320 SM00047 Lysozyme subfamily 2 A1R12_14330 SM00835 Cupin A1R12_14365 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). A1R12_14365 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain A1R12_14365 SM00319 Homologues of the ligand binding domain of Tar A1R12_14370 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). A1R12_14370 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain A1R12_14370 SM00319 Homologues of the ligand binding domain of Tar A1R12_14375 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). A1R12_14375 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain A1R12_14375 SM00319 Homologues of the ligand binding domain of Tar A1R12_14380 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). A1R12_14380 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain A1R12_14380 SM00319 Homologues of the ligand binding domain of Tar A1R12_14405 SM00642 Alpha-amylase domain A1R12_14410 SM01091 Transporter associated domain A1R12_14480 SM00316 Ribosomal protein S1-like RNA-binding domain A1R12_14490 SM00344 helix_turn_helix ASNC type A1R12_14510 SM00387 Histidine kinase-like ATPases A1R12_14510 SM00388 His Kinase A (phosphoacceptor) domain A1R12_14515 SM01298 A1R12_14515 A1R12_14520 SM00479 A1R12_14520 A1R12_14545 SM00091 PAS domain A1R12_14545 SM00387 Histidine kinase-like ATPases A1R12_14550 SM00448 cheY-homologous receiver domain A1R12_14560 SM00382 ATPases associated with a variety of cellular activities A1R12_14620 SM00421 helix_turn_helix, Lux Regulon A1R12_14620 SM00448 cheY-homologous receiver domain A1R12_14625 SM00387 Histidine kinase-like ATPases A1R12_14650 SM00052 Putative diguanylate phosphodiesterase A1R12_14690 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. A1R12_14735 SM01002 Alanine dehydrogenase/PNT, C-terminal domain A1R12_14735 SM01003 Alanine dehydrogenase/PNT, N-terminal domain A1R12_14745 SM00923 MbtH-like protein A1R12_14750 SM00823 Phosphopantetheine attachment site A1R12_14750 SM00824 Thioesterase A1R12_14770 SM00822 A1R12_14770 A1R12_14830 SM01240 A1R12_14830 A1R12_14845 SM00382 ATPases associated with a variety of cellular activities A1R12_14955 SM00729 Elongator protein 3, MiaB family, Radical SAM A1R12_15000 SM00028 Tetratricopeptide repeats A1R12_15035 SM00382 ATPases associated with a variety of cellular activities A1R12_15040 SM00345 helix_turn_helix gluconate operon transcriptional repressor A1R12_15040 SM00866 A1R12_15040 A1R12_15070 SM00422 helix_turn_helix, mercury resistance A1R12_15085 SM00465 GIY-YIG type nucleases (URI domain) A1R12_15130 SM00382 ATPases associated with a variety of cellular activities A1R12_15150 SM00382 ATPases associated with a variety of cellular activities A1R12_15150 SM00930 A1R12_15150 A1R12_15165 SM00493 A1R12_15165 A1R12_15220 SM00347 helix_turn_helix multiple antibiotic resistance protein A1R12_15265 SM00382 ATPases associated with a variety of cellular activities A1R12_15290 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. A1R12_15295 SM00448 cheY-homologous receiver domain A1R12_15295 SM00862 Transcriptional regulatory protein, C terminal A1R12_15300 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain A1R12_15300 SM00387 Histidine kinase-like ATPases A1R12_15300 SM00388 His Kinase A (phosphoacceptor) domain A1R12_15335 SM00421 helix_turn_helix, Lux Regulon A1R12_15335 SM00448 cheY-homologous receiver domain A1R12_15340 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain A1R12_15340 SM00387 Histidine kinase-like ATPases A1R12_15375 SM00382 ATPases associated with a variety of cellular activities A1R12_15400 SM00387 Histidine kinase-like ATPases A1R12_15400 SM00388 His Kinase A (phosphoacceptor) domain A1R12_15405 SM00448 cheY-homologous receiver domain A1R12_15405 SM00862 Transcriptional regulatory protein, C terminal A1R12_15420 SM00835 Cupin A1R12_15430 SM00382 ATPases associated with a variety of cellular activities A1R12_15490 SM00421 helix_turn_helix, Lux Regulon A1R12_15490 SM00448 cheY-homologous receiver domain A1R12_15500 SM00382 ATPases associated with a variety of cellular activities A1R12_15615 SM00382 ATPases associated with a variety of cellular activities A1R12_15630 SM00062 Bacterial periplasmic substrate-binding proteins A1R12_15635 SM00062 Bacterial periplasmic substrate-binding proteins A1R12_15670 SM00316 Ribosomal protein S1-like RNA-binding domain A1R12_15670 SM00357 Cold shock protein domain A1R12_15670 SM00955 A1R12_15670 A1R12_15685 SM00530 Helix-turn-helix XRE-family like proteins A1R12_15690 SM00530 Helix-turn-helix XRE-family like proteins A1R12_15695 SM00530 Helix-turn-helix XRE-family like proteins A1R12_15705 SM00387 Histidine kinase-like ATPases A1R12_15705 SM00388 His Kinase A (phosphoacceptor) domain A1R12_15710 SM00448 cheY-homologous receiver domain A1R12_15710 SM00862 Transcriptional regulatory protein, C terminal A1R12_15725 SM00382 ATPases associated with a variety of cellular activities A1R12_15745 SM00116 Domain in cystathionine beta-synthase and other proteins. A1R12_15745 SM00382 ATPases associated with a variety of cellular activities A1R12_15770 SM00116 Domain in cystathionine beta-synthase and other proteins. A1R12_15770 SM00382 ATPases associated with a variety of cellular activities A1R12_15845 SM00984 UDP binding domain A1R12_15855 SM01192 A1R12_15855 A1R12_15855 SM01193 A1R12_15855 A1R12_15880 SM00846 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain A1R12_15895 SM00345 helix_turn_helix gluconate operon transcriptional repressor A1R12_15930 SM00354 helix_turn _helix lactose operon repressor A1R12_15980 SM00345 helix_turn_helix gluconate operon transcriptional repressor A1R12_15980 SM00895 A1R12_15980 A1R12_16075 SM00530 Helix-turn-helix XRE-family like proteins A1R12_16155 SM00640 Glycosyl hydrolases family 32 A1R12_16165 SM00354 helix_turn _helix lactose operon repressor A1R12_16205 SM00947 Carbonic anhydrase A1R12_16265 SM00028 Tetratricopeptide repeats A1R12_16270 SM00387 Histidine kinase-like ATPases A1R12_16270 SM00388 His Kinase A (phosphoacceptor) domain A1R12_16275 SM00448 cheY-homologous receiver domain A1R12_16275 SM00862 Transcriptional regulatory protein, C terminal A1R12_16285 SM00382 ATPases associated with a variety of cellular activities A1R12_16365 SM00345 helix_turn_helix gluconate operon transcriptional repressor A1R12_16365 SM00866 A1R12_16365 A1R12_16405 SM00382 ATPases associated with a variety of cellular activities A1R12_16410 SM00487 DEAD-like helicases superfamily A1R12_16410 SM00490 helicase superfamily c-terminal domain A1R12_16450 SM00382 ATPases associated with a variety of cellular activities A1R12_16460 SM00823 Phosphopantetheine attachment site A1R12_16465 SM00823 Phosphopantetheine attachment site A1R12_16480 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. A1R12_16490 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. A1R12_16490 SM00245 tail specific protease A1R12_16495 SM00710 Parallel beta-helix repeats A1R12_16495 SM00722 Domain present in carbohydrate binding proteins and sugar hydrolses A1R12_16505 SM00382 ATPases associated with a variety of cellular activities A1R12_16520 SM00937 A1R12_16520 A1R12_16525 SM00957 SecA DEAD-like domain A1R12_16525 SM00958 SecA preprotein cross-linking domain A1R12_16610 SM00487 DEAD-like helicases superfamily A1R12_16610 SM00490 helicase superfamily c-terminal domain A1R12_16620 SM00421 helix_turn_helix, Lux Regulon A1R12_16620 SM00448 cheY-homologous receiver domain A1R12_16625 SM00387 Histidine kinase-like ATPases A1R12_16665 SM00984 UDP binding domain A1R12_16685 SM00646 A1R12_16685 A1R12_16715 SM00382 ATPases associated with a variety of cellular activities A1R12_16750 SM00047 Lysozyme subfamily 2 A1R12_16750 SM00287 Bacterial SH3 domain homologues A1R12_16805 SM00854 Bacterial capsule synthesis protein PGA_cap A1R12_16835 SM00354 helix_turn _helix lactose operon repressor A1R12_16850 SM00382 ATPases associated with a variety of cellular activities A1R12_16865 SM00287 Bacterial SH3 domain homologues A1R12_16915 SM00903 Flavin reductase like domain A1R12_16930 SM00344 helix_turn_helix ASNC type A1R12_16955 SM00860 SMI1 / KNR4 family A1R12_16960 SM00860 SMI1 / KNR4 family A1R12_16985 SM00984 UDP binding domain A1R12_17010 SM00487 DEAD-like helicases superfamily A1R12_17010 SM00490 helicase superfamily c-terminal domain A1R12_17020 SM00420 helix_turn_helix, Deoxyribose operon repressor A1R12_17020 SM01134 A1R12_17020 A1R12_17050 SM00028 Tetratricopeptide repeats A1R12_17075 SM00347 helix_turn_helix multiple antibiotic resistance protein A1R12_17105 SM00938 Nitrogen regulatory protein P-II A1R12_17115 SM00014 Acid phosphatase homologues A1R12_17145 SM00155 Phospholipase D. Active site motifs. A1R12_17195 SM00028 Tetratricopeptide repeats A1R12_17200 SM00729 Elongator protein 3, MiaB family, Radical SAM A1R12_17210 SM00327 von Willebrand factor (vWF) type A domain A1R12_17215 SM00327 von Willebrand factor (vWF) type A domain A1R12_17250 SM00382 ATPases associated with a variety of cellular activities A1R12_17310 SM00226 Low molecular weight phosphatase family A1R12_17350 SM00937 A1R12_17350 A1R12_17370 SM00919 Malic enzyme, NAD binding domain A1R12_17370 SM01274 A1R12_17370 A1R12_17385 SM00357 Cold shock protein domain A1R12_17385 SM00382 ATPases associated with a variety of cellular activities A1R12_17385 SM00959 Rho termination factor, N-terminal domain A1R12_17410 SM00448 cheY-homologous receiver domain A1R12_17435 SM00155 Phospholipase D. Active site motifs. A1R12_17450 SM00382 ATPases associated with a variety of cellular activities A1R12_17455 SM00155 Phospholipase D. Active site motifs. A1R12_17480 SM00926 Molybdopterin oxidoreductase Fe4S4 domain A1R12_17495 SM00100 Cyclic nucleotide-monophosphate binding domain A1R12_17495 SM00419 helix_turn_helix, cAMP Regulatory protein A1R12_17505 SM00836 DALR anticodon binding domain A1R12_17505 SM01016 Arginyl tRNA synthetase N terminal dom A1R12_17530 SM00028 Tetratricopeptide repeats A1R12_17540 SM00530 Helix-turn-helix XRE-family like proteins A1R12_17570 SM00421 helix_turn_helix, Lux Regulon A1R12_17610 SM00347 helix_turn_helix multiple antibiotic resistance protein A1R12_17625 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. A1R12_17650 SM00382 ATPases associated with a variety of cellular activities A1R12_17765 SM00839 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase A1R12_17805 SM00858 A1R12_17805 A1R12_17850 SM00986 Uracil DNA glycosylase superfamily A1R12_17850 SM00987 UreE urease accessory protein, C-terminal domain A1R12_17870 SM00640 Glycosyl hydrolases family 32 A1R12_17880 SM01061 CAT RNA binding domain A1R12_18025 SM00422 helix_turn_helix, mercury resistance A1R12_18035 SM00359 Putative RNA-binding Domain in PseudoUridine synthase and Archaeosine transglycosylase A1R12_18065 SM00954 Region found in RelA / SpoT proteins A1R12_18150 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor A1R12_18195 SM01060 A1R12_18195 A1R12_18215 SM00382 ATPases associated with a variety of cellular activities A1R12_18220 SM00382 ATPases associated with a variety of cellular activities A1R12_18245 SM00382 ATPases associated with a variety of cellular activities A1R12_18310 SM01060 A1R12_18310 A1R12_18325 SM01061 CAT RNA binding domain A1R12_18335 SM00487 DEAD-like helicases superfamily A1R12_18335 SM00490 helicase superfamily c-terminal domain A1R12_18405 SM00656 A1R12_18405 A1R12_18495 SM00941 Pyrimidine nucleoside phosphorylase C-terminal domain A1R12_18505 SM01133 A1R12_18505 A1R12_18560 SM00382 ATPases associated with a variety of cellular activities A1R12_18565 SM00387 Histidine kinase-like ATPases A1R12_18570 SM00448 cheY-homologous receiver domain A1R12_18570 SM00862 Transcriptional regulatory protein, C terminal A1R12_18575 SM00387 Histidine kinase-like ATPases A1R12_18575 SM00388 His Kinase A (phosphoacceptor) domain A1R12_18580 SM00448 cheY-homologous receiver domain A1R12_18580 SM00862 Transcriptional regulatory protein, C terminal A1R12_18585 SM00382 ATPases associated with a variety of cellular activities A1R12_18650 SM00420 helix_turn_helix, Deoxyribose operon repressor A1R12_18650 SM01134 A1R12_18650 A1R12_18665 SM00387 Histidine kinase-like ATPases A1R12_18680 SM00421 helix_turn_helix, Lux Regulon A1R12_18680 SM00448 cheY-homologous receiver domain A1R12_18710 SM00564 beta-propeller repeat A1R12_18720 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor A1R12_18770 SM01092 CO dehydrogenase flavoprotein C-terminal domain A1R12_18775 SM01008 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain A1R12_18855 SM00028 Tetratricopeptide repeats A1R12_18880 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor A1R12_18885 SM00382 ATPases associated with a variety of cellular activities A1R12_18890 SM00558 A domain family that is part of the cupin metalloenzyme superfamily. A1R12_18895 SM00382 ATPases associated with a variety of cellular activities A1R12_18915 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain A1R12_18915 SM00387 Histidine kinase-like ATPases A1R12_18915 SM00388 His Kinase A (phosphoacceptor) domain A1R12_18925 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. A1R12_18930 SM00849 Metallo-beta-lactamase superfamily A1R12_18945 SM00091 PAS domain A1R12_18945 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain A1R12_18945 SM00387 Histidine kinase-like ATPases A1R12_18945 SM00388 His Kinase A (phosphoacceptor) domain A1R12_18950 SM00448 cheY-homologous receiver domain A1R12_18950 SM00862 Transcriptional regulatory protein, C terminal A1R12_18980 SM00788 Adenylosuccinate synthetase A1R12_18990 SM00382 ATPases associated with a variety of cellular activities A1R12_19055 SM00267 diguanylate cyclase A1R12_19075 SM01131 A1R12_19075 A1R12_19090 SM00640 Glycosyl hydrolases family 32 A1R12_19095 SM00345 helix_turn_helix gluconate operon transcriptional repressor A1R12_19095 SM00895 A1R12_19095 A1R12_19125 SM00347 helix_turn_helix multiple antibiotic resistance protein A1R12_19135 SM00347 helix_turn_helix multiple antibiotic resistance protein A1R12_19185 SM00345 helix_turn_helix gluconate operon transcriptional repressor A1R12_19195 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. A1R12_19205 SM00422 helix_turn_helix, mercury resistance A1R12_19205 SM00871 Bacterial transcription activator, effector binding domain A1R12_19235 SM00354 helix_turn _helix lactose operon repressor A1R12_19250 SM00342 helix_turn_helix, arabinose operon control protein A1R12_19275 SM00926 Molybdopterin oxidoreductase Fe4S4 domain A1R12_19300 SM00470 ParB-like nuclease domain A1R12_19310 SM00470 ParB-like nuclease domain A1R12_19320 SM01228 A1R12_19320 A1R12_19330 SM00393 Putative single-stranded nucleic acids-binding domain A1R12_19330 SM01245 A1R12_19330 A1R12_19345 SM00382 ATPases associated with a variety of cellular activities A1R12_19345 SM00760 Bacterial dnaA protein helix-turn-helix domain A1R12_19350 SM00480 DNA polymerase III beta subunit A1R12_19370 SM00387 Histidine kinase-like ATPases A1R12_19370 SM00433 TopoisomeraseII A1R12_19375 SM00434 DNA Topoisomerase IV