locus-tag class description J4A01_00005 PF00308 Bacterial dnaA protein J4A01_00005 PF08299 Bacterial dnaA protein helix-turn-helix J4A01_00005 PF11638 DnaA N-terminal domain J4A01_00010 PF00712 DNA polymerase III beta subunit, N-terminal domain J4A01_00010 PF02767 DNA polymerase III beta subunit, central domain J4A01_00010 PF02768 DNA polymerase III beta subunit, C-terminal domain J4A01_00020 PF02463 RecF/RecN/SMC N terminal domain J4A01_00025 PF04025 Domain of unknown function (DUF370) J4A01_00030 PF00204 DNA gyrase B J4A01_00030 PF00986 DNA gyrase B subunit, carboxyl terminus J4A01_00030 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase J4A01_00030 PF01751 Toprim domain J4A01_00035 PF00521 DNA gyrase/topoisomerase IV, subunit A J4A01_00035 PF03989 DNA gyrase C-terminal domain, beta-propeller J4A01_00065 PF14175 YaaC-like Protein J4A01_00070 PF00571 CBS domain J4A01_00070 PF00478 IMP dehydrogenase / GMP reductase domain J4A01_00075 PF07943 Penicillin-binding protein 5, C-terminal domain J4A01_00075 PF00768 D-alanyl-D-alanine carboxypeptidase J4A01_00080 PF01680 SOR/SNZ family J4A01_00085 PF01174 SNO glutamine amidotransferase family J4A01_00090 PF02403 Seryl-tRNA synthetase N-terminal domain J4A01_00090 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) J4A01_00095 PF02595 Glycerate kinase family J4A01_00105 PF01712 Deoxynucleoside kinase J4A01_00110 PF01712 Deoxynucleoside kinase J4A01_00115 PF00704 Glycosyl hydrolases family 18 J4A01_00115 PF01476 LysM domain J4A01_00120 PF00857 Isochorismatase family J4A01_00125 PF14437 MafB19-like deaminase J4A01_00135 PF12169 DNA polymerase III subunits gamma and tau domain III J4A01_00140 PF02575 YbaB/EbfC DNA-binding family J4A01_00145 PF02132 RecR protein J4A01_00145 PF13662 Toprim domain J4A01_00150 PF10704 Protein of unknown function (DUF2508) J4A01_00155 PF07441 SigmaK-factor processing regulatory protein BofA J4A01_00185 PF10764 Inhibitor of sigma-G Gin J4A01_00190 PF10112 5-bromo-4-chloroindolyl phosphate hydrolysis protein J4A01_00195 PF05816 Toxic anion resistance protein (TelA) J4A01_00200 PF01276 Orn/Lys/Arg decarboxylase, major domain J4A01_00200 PF03711 Orn/Lys/Arg decarboxylase, C-terminal domain J4A01_00205 PF02223 Thymidylate kinase J4A01_00210 PF06153 Cyclic-di-AMP receptor J4A01_00215 PF03885 Protein of unknown function (DUF327) J4A01_00220 PF09115 DNA polymerase III, delta subunit, C terminal J4A01_00225 PF04468 PSP1 C-terminal conserved region J4A01_00230 PF06156 Initiation control protein YabA J4A01_00235 PF05175 Methyltransferase small domain J4A01_00240 PF01541 GIY-YIG catalytic domain J4A01_00245 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases J4A01_00250 PF18277 AbrB C-terminal domain J4A01_00250 PF04014 Antidote-toxin recognition MazE, bacterial antitoxin J4A01_00255 PF08264 Anticodon-binding domain of tRNA J4A01_00255 PF09334 tRNA synthetases class I (M) J4A01_00255 PF01588 Putative tRNA binding domain J4A01_00260 PF01026 TatD related DNase J4A01_00265 PF03990 G5-linked-Ubiquitin-like domain J4A01_00265 PF07501 G5 domain J4A01_00265 PF06725 3D domain J4A01_00270 PF13331 Domain of unknown function (DUF4093) J4A01_00270 PF13662 Toprim domain J4A01_00275 PF00398 Ribosomal RNA adenine dimethylase J4A01_00280 PF05582 YabG peptidase U57 J4A01_00285 PF06257 Biofilm formation stimulator VEG J4A01_00290 PF00269 Small, acid-soluble spore proteins, alpha/beta type J4A01_00295 PF08544 GHMP kinases C terminal J4A01_00295 PF00288 GHMP kinases N terminal domain J4A01_00300 PF00156 Phosphoribosyl transferase domain J4A01_00300 PF09182 Bacterial purine repressor, N-terminal J4A01_00305 PF01042 Endoribonuclease L-PSP J4A01_00310 PF04026 SpoVG J4A01_00315 PF00483 Nucleotidyl transferase J4A01_00315 PF00132 Bacterial transferase hexapeptide (six repeats) J4A01_00320 PF14572 Phosphoribosyl synthetase-associated domain J4A01_00320 PF13793 N-terminal domain of ribose phosphate pyrophosphokinase J4A01_00325 PF01386 Ribosomal L25p family J4A01_00325 PF14693 Ribosomal protein TL5, C-terminal domain J4A01_00330 PF01195 Peptidyl-tRNA hydrolase J4A01_00335 PF10955 Protein of unknown function (DUF2757) J4A01_00340 PF02559 CarD-like/TRCF domain J4A01_00340 PF00270 DEAD/DEAH box helicase J4A01_00340 PF00271 Helicase conserved C-terminal domain J4A01_00340 PF03461 TRCF domain J4A01_00340 PF17757 UvrB interaction domain J4A01_00345 PF15714 Stage V sporulation protein T C-terminal, transcription factor J4A01_00345 PF04014 Antidote-toxin recognition MazE, bacterial antitoxin J4A01_00350 PF14667 Polysaccharide biosynthesis C-terminal domain J4A01_00350 PF01943 Polysaccharide biosynthesis protein J4A01_00355 PF03819 MazG nucleotide pyrophosphohydrolase domain J4A01_00355 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases J4A01_00360 PF01479 S4 domain J4A01_00365 PF07873 YabP family J4A01_00370 PF09578 Spore cortex protein YabQ (Spore_YabQ) J4A01_00375 PF04977 Septum formation initiator J4A01_00380 PF00575 S1 RNA binding domain J4A01_00395 PF07228 Stage II sporulation protein E (SpoIIE) J4A01_00400 PF00092 von Willebrand factor type A domain J4A01_00405 PF00069 Protein kinase domain J4A01_00410 PF01171 PP-loop family J4A01_00410 PF09179 TilS substrate binding domain J4A01_00410 PF11734 TilS substrate C-terminal domain J4A01_00415 PF00156 Phosphoribosyl transferase domain J4A01_00420 PF00004 ATPase family associated with various cellular activities (AAA) J4A01_00420 PF17862 AAA+ lid domain J4A01_00420 PF06480 FtsH Extracellular J4A01_00420 PF01434 Peptidase family M41 J4A01_00425 PF03309 Type III pantothenate kinase J4A01_00430 PF01430 Hsp33 protein J4A01_00435 PF13145 PPIC-type PPIASE domain J4A01_00440 PF00291 Pyridoxal-phosphate dependent enzyme J4A01_00445 PF04715 Anthranilate synthase component I, N terminal region J4A01_00445 PF00425 chorismate binding enzyme J4A01_00450 PF00117 Glutamine amidotransferase class-I J4A01_00455 PF01063 Amino-transferase class IV J4A01_00460 PF00809 Pterin binding enzyme J4A01_00465 PF02152 Dihydroneopterin aldolase J4A01_00470 PF01288 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK) J4A01_00475 PF01381 Helix-turn-helix J4A01_00480 PF01207 Dihydrouridine synthase (Dus) J4A01_00485 PF00152 tRNA synthetases class II (D, K and N) J4A01_00485 PF01336 OB-fold nucleic acid binding domain J4A01_00565 PF05848 CtsR N-terminal HTH domain J4A01_00565 PF17727 CtsR C-terminal dimerization domain J4A01_00570 PF02151 UvrB/uvrC motif J4A01_00575 PF00217 ATP:guanido phosphotransferase, C-terminal catalytic domain J4A01_00580 PF00004 ATPase family associated with various cellular activities (AAA) J4A01_00580 PF07724 AAA domain (Cdc48 subfamily) J4A01_00580 PF17871 AAA lid domain J4A01_00580 PF02861 Clp amino terminal domain, pathogenicity island component J4A01_00580 PF10431 C-terminal, D2-small domain, of ClpB protein J4A01_00585 PF18073 Rubredoxin metal binding domain J4A01_00590 PF10635 DisA bacterial checkpoint controller linker region J4A01_00590 PF02457 DisA bacterial checkpoint controller nucleotide-binding J4A01_00600 PF01128 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase J4A01_00605 PF02542 YgbB family J4A01_00610 PF00749 tRNA synthetases class I (E and Q), catalytic domain J4A01_00615 PF00132 Bacterial transferase hexapeptide (six repeats) J4A01_00615 PF06426 Serine acetyltransferase, N-terminal J4A01_00620 PF09190 DALR domain J4A01_00620 PF01406 tRNA synthetases class I (C) catalytic domain J4A01_00625 PF00636 Ribonuclease III domain J4A01_00630 PF00588 SpoU rRNA Methylase family J4A01_00630 PF08032 RNA 2'-O ribose methyltransferase substrate binding J4A01_00635 PF05991 YacP-like NYN domain J4A01_00640 PF08281 Sigma-70, region 4 J4A01_00640 PF04542 Sigma-70 region 2 J4A01_00645 PF00471 Ribosomal protein L33 J4A01_00650 PF00584 SecE/Sec61-gamma subunits of protein translocation complex J4A01_00655 PF00467 KOW motif J4A01_00655 PF02357 Transcription termination factor nusG J4A01_00660 PF00298 Ribosomal protein L11, RNA binding domain J4A01_00660 PF03946 Ribosomal protein L11, N-terminal domain J4A01_00665 PF00687 Ribosomal protein L1p/L10e family J4A01_00670 PF00466 Ribosomal protein L10 J4A01_00675 PF00542 Ribosomal protein L7/L12 C-terminal domain J4A01_00675 PF16320 Ribosomal protein L7/L12 dimerisation domain J4A01_00680 PF05175 Methyltransferase small domain J4A01_00685 PF00562 RNA polymerase Rpb2, domain 6 J4A01_00685 PF10385 RNA polymerase beta subunit external 1 domain J4A01_00685 PF04560 RNA polymerase Rpb2, domain 7 J4A01_00685 PF04561 RNA polymerase Rpb2, domain 2 J4A01_00685 PF04563 RNA polymerase beta subunit J4A01_00685 PF04565 RNA polymerase Rpb2, domain 3 J4A01_00690 PF04997 RNA polymerase Rpb1, domain 1 J4A01_00690 PF00623 RNA polymerase Rpb1, domain 2 J4A01_00690 PF04983 RNA polymerase Rpb1, domain 3 J4A01_00690 PF05000 RNA polymerase Rpb1, domain 4 J4A01_00690 PF04998 RNA polymerase Rpb1, domain 5 J4A01_00695 PF01248 Ribosomal protein L7Ae/L30e/S12e/Gadd45 family J4A01_00700 PF00164 Ribosomal protein S12/S23 J4A01_00705 PF00177 Ribosomal protein S7p/S5e J4A01_00710 PF00679 Elongation factor G C-terminus J4A01_00710 PF14492 Elongation Factor G, domain II J4A01_00710 PF03764 Elongation factor G, domain IV J4A01_00710 PF00009 Elongation factor Tu GTP binding domain J4A01_00710 PF03144 Elongation factor Tu domain 2 J4A01_00715 PF03143 Elongation factor Tu C-terminal domain J4A01_00715 PF03144 Elongation factor Tu domain 2 J4A01_00715 PF00009 Elongation factor Tu GTP binding domain J4A01_00720 PF12146 Serine aminopeptidase, S33 J4A01_00725 PF00338 Ribosomal protein S10p/S20e J4A01_00730 PF00297 Ribosomal protein L3 J4A01_00735 PF00573 Ribosomal protein L4/L1 family J4A01_00740 PF00276 Ribosomal protein L23 J4A01_00745 PF00181 Ribosomal Proteins L2, RNA binding domain J4A01_00745 PF03947 Ribosomal Proteins L2, C-terminal domain J4A01_00750 PF00203 Ribosomal protein S19 J4A01_00755 PF00237 Ribosomal protein L22p/L17e J4A01_00760 PF07650 KH domain J4A01_00760 PF00189 Ribosomal protein S3, C-terminal domain J4A01_00765 PF00252 Ribosomal protein L16p/L10e J4A01_00770 PF00831 Ribosomal L29 protein J4A01_00775 PF00366 Ribosomal protein S17 J4A01_00780 PF00238 Ribosomal protein L14p/L23e J4A01_00785 PF00467 KOW motif J4A01_00785 PF17136 Ribosomal proteins 50S L24/mitochondrial 39S L24 J4A01_00790 PF00281 Ribosomal protein L5 J4A01_00790 PF00673 ribosomal L5P family C-terminus J4A01_00795 PF00253 Ribosomal protein S14p/S29e J4A01_00800 PF00410 Ribosomal protein S8 J4A01_00805 PF00347 Ribosomal protein L6 J4A01_00810 PF00861 Ribosomal L18 of archaea, bacteria, mitoch. and chloroplast J4A01_00815 PF00333 Ribosomal protein S5, N-terminal domain J4A01_00815 PF03719 Ribosomal protein S5, C-terminal domain J4A01_00820 PF00327 Ribosomal protein L30p/L7e J4A01_00825 PF00828 Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27A J4A01_00830 PF00344 SecY translocase J4A01_00835 PF05191 Adenylate kinase, active site lid J4A01_00840 PF00557 Metallopeptidase family M24 J4A01_00845 PF01176 Translation initiation factor 1A / IF-1 J4A01_00850 PF00444 Ribosomal protein L36 J4A01_00855 PF00416 Ribosomal protein S13/S18 J4A01_00860 PF00411 Ribosomal protein S11 J4A01_00865 PF01000 RNA polymerase Rpb3/RpoA insert domain J4A01_00865 PF03118 Bacterial RNA polymerase, alpha chain C terminal domain J4A01_00865 PF01193 RNA polymerase Rpb3/Rpb11 dimerisation domain J4A01_00870 PF01196 Ribosomal protein L17 J4A01_00875 PF00005 ABC transporter J4A01_00880 PF00005 ABC transporter J4A01_00885 PF02361 Cobalt transport protein J4A01_00890 PF01416 tRNA pseudouridine synthase J4A01_00895 PF00572 Ribosomal protein L13 J4A01_00900 PF00380 Ribosomal protein S9/S16 J4A01_00905 PF08241 Methyltransferase domain J4A01_00910 PF05163 DinB family J4A01_00915 PF10730 Protein of unknown function (DUF2521) J4A01_00920 PF01520 N-acetylmuramoyl-L-alanine amidase J4A01_00925 PF10609 NUBPL iron-transfer P-loop NTPase J4A01_00930 PF17898 Spore germination GerD central core domain J4A01_00935 PF14089 KinB-signalling pathway activation in sporulation J4A01_00940 PF01522 Polysaccharide deacetylase J4A01_01000 PF07690 Major Facilitator Superfamily J4A01_01005 PF00202 Aminotransferase class-III J4A01_01015 PF08240 Alcohol dehydrogenase GroES-like domain J4A01_01015 PF00107 Zinc-binding dehydrogenase J4A01_01020 PF00916 Sulfate permease family J4A01_01020 PF01740 STAS domain J4A01_01025 PF01758 Sodium Bile acid symporter family J4A01_01030 PF00756 Putative esterase J4A01_01035 PF01032 FecCD transport family J4A01_01040 PF01032 FecCD transport family J4A01_01045 PF01497 Periplasmic binding protein J4A01_01050 PF12833 Helix-turn-helix domain J4A01_01050 PF01497 Periplasmic binding protein J4A01_01055 PF07075 Protein of unknown function (DUF1343) J4A01_01060 PF00933 Glycosyl hydrolase family 3 N terminal domain J4A01_01060 PF01915 Glycosyl hydrolase family 3 C-terminal domain J4A01_01065 PF00144 Beta-lactamase J4A01_01070 PF00367 phosphotransferase system, EIIB J4A01_01070 PF02378 Phosphotransferase system, EIIC J4A01_01075 PF01380 SIS domain J4A01_01085 PF04463 Protein of unknown function (DUF523) J4A01_01115 PF04542 Sigma-70 region 2 J4A01_01115 PF08281 Sigma-70, region 4 J4A01_01120 PF13490 Putative zinc-finger J4A01_01125 PF02457 DisA bacterial checkpoint controller nucleotide-binding J4A01_01130 PF07949 YbbR-like protein J4A01_01135 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I J4A01_01135 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II J4A01_01135 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III J4A01_01135 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain J4A01_01140 PF01380 SIS domain J4A01_01145 PF00005 ABC transporter J4A01_01155 PF00486 Transcriptional regulatory protein, C terminal J4A01_01155 PF00072 Response regulator receiver domain J4A01_01160 PF00512 His Kinase A (phospho-acceptor) domain J4A01_01160 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase J4A01_01160 PF00672 HAMP domain J4A01_01160 PF13426 PAS domain J4A01_01165 PF00005 ABC transporter J4A01_01170 PF02687 FtsX-like permease family J4A01_01175 PF00873 AcrB/AcrD/AcrF family J4A01_01185 PF00248 Aldo/keto reductase family J4A01_01190 PF04172 LrgB-like family J4A01_01195 PF03788 LrgA family J4A01_01200 PF01047 MarR family J4A01_01205 PF00324 Amino acid permease J4A01_01210 PF13419 Haloacid dehalogenase-like hydrolase J4A01_01215 PF07730 Histidine kinase J4A01_01220 PF00196 Bacterial regulatory proteins, luxR family J4A01_01220 PF00072 Response regulator receiver domain J4A01_01225 PF00005 ABC transporter J4A01_01250 PF17334 Minor curli fiber component A J4A01_01265 PF13520 Amino acid permease J4A01_01280 PF10852 Protein of unknown function (DUF2651) J4A01_01285 PF03009 Glycerophosphoryl diester phosphodiesterase family J4A01_01290 PF07690 Major Facilitator Superfamily J4A01_01295 PF10852 Protein of unknown function (DUF2651) J4A01_01300 PF11794 4-hydroxyphenylacetate 3-hydroxylase N terminal J4A01_01300 PF03241 4-hydroxyphenylacetate 3-hydroxylase C terminal J4A01_01310 PF08924 Domain of unknown function (DUF1906) J4A01_01310 PF01471 Putative peptidoglycan binding domain J4A01_01325 PF03747 ADP-ribosylglycohydrolase J4A01_01330 PF14411 A nuclease of the HNH/ENDO VII superfamily with conserved LHH J4A01_01330 PF04740 LXG domain of WXG superfamily J4A01_01340 PF00465 Iron-containing alcohol dehydrogenase J4A01_01345 PF02222 ATP-grasp domain J4A01_01350 PF01066 CDP-alcohol phosphatidyltransferase J4A01_01355 PF09335 SNARE associated Golgi protein J4A01_01360 PF02666 Phosphatidylserine decarboxylase J4A01_01370 PF00581 Rhodanese-like domain J4A01_01370 PF12368 Rhodanase C-terminal J4A01_01370 PF17773 UPF0176 acylphosphatase like domain J4A01_01375 PF00375 Sodium:dicarboxylate symporter family J4A01_01380 PF01063 Amino-transferase class IV J4A01_01385 PF00324 Amino acid permease J4A01_01390 PF02574 Homocysteine S-methyltransferase J4A01_01395 PF01235 Sodium:alanine symporter family J4A01_01400 PF04960 Glutaminase J4A01_01405 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase J4A01_01410 PF08664 YcbB domain J4A01_01410 PF00072 Response regulator receiver domain J4A01_01420 PF15777 Tryptophan RNA-binding attenuator protein inhibitory protein J4A01_01430 PF16916 Dimerisation domain of Zinc Transporter J4A01_01430 PF01545 Cation efflux family J4A01_01435 PF00881 Nitroreductase family J4A01_01440 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily J4A01_01445 PF07681 DoxX J4A01_01450 PF00085 Thioredoxin J4A01_01460 PF10710 Protein of unknown function (DUF2512) J4A01_01465 PF07486 Cell Wall Hydrolase J4A01_01470 PF09423 PhoD-like phosphatase J4A01_01470 PF16655 PhoD-like phosphatase, N-terminal domain J4A01_01475 PF02416 mttA/Hcf106 family J4A01_01480 PF00902 Sec-independent protein translocase protein (TatC) J4A01_01485 PF01470 Pyroglutamyl peptidase J4A01_01490 PF00266 Aminotransferase class-V J4A01_01495 PF07690 Major Facilitator Superfamily J4A01_01500 PF00440 Bacterial regulatory proteins, tetR family J4A01_01505 PF00710 Asparaginase, N-terminal J4A01_01505 PF17763 Glutaminase/Asparaginase C-terminal domain J4A01_01510 PF01674 Lipase (class 2) J4A01_01515 PF05225 helix-turn-helix, Psq domain J4A01_01515 PF02810 SEC-C motif J4A01_01525 PF17118 Domain of unknown function (DUF5105) J4A01_01525 PF11611 Domain of unknown function (DUF4352) J4A01_01530 PF16244 Domain of unknown function (DUF4901) J4A01_01535 PF16244 Domain of unknown function (DUF4901) J4A01_01540 PF13539 D-alanyl-D-alanine carboxypeptidase J4A01_01545 PF18801 response regulator aspartate phosphatase H, N terminal J4A01_01555 PF00128 Alpha amylase, catalytic domain J4A01_01560 PF01297 Zinc-uptake complex component A periplasmic J4A01_01565 PF00005 ABC transporter J4A01_01570 PF00950 ABC 3 transport family J4A01_01575 PF00296 Luciferase-like monooxygenase J4A01_01580 PF02342 TerD domain J4A01_01585 PF02342 TerD domain J4A01_01590 PF02342 TerD domain J4A01_01595 PF03741 Integral membrane protein TerC family J4A01_01600 PF14266 Putative component of 'biosynthetic module' J4A01_01605 PF05816 Toxic anion resistance protein (TelA) J4A01_01610 PF07690 Major Facilitator Superfamily J4A01_01615 PF00005 ABC transporter J4A01_01615 PF00571 CBS domain J4A01_01620 PF00528 Binding-protein-dependent transport system inner membrane component J4A01_01625 PF04069 Substrate binding domain of ABC-type glycine betaine transport system J4A01_01630 PF07687 Peptidase dimerisation domain J4A01_01630 PF01546 Peptidase family M20/M25/M40 J4A01_01635 PF03606 C4-dicarboxylate anaerobic carrier J4A01_01650 PF02866 lactate/malate dehydrogenase, alpha/beta C-terminal domain J4A01_01650 PF00056 lactate/malate dehydrogenase, NAD binding domain J4A01_01655 PF07690 Major Facilitator Superfamily J4A01_01660 PF01047 MarR family J4A01_01665 PF01810 LysE type translocator J4A01_01670 PF08892 YqcI/YcgG family J4A01_01675 PF00324 Amino acid permease J4A01_01680 PF09347 Domain of unknown function (DUF1989) J4A01_01685 PF02540 NAD synthase J4A01_01690 PF12197 Bacillus cereus group antimicrobial protein J4A01_01700 PF01261 Xylose isomerase-like TIM barrel J4A01_01705 PF07690 Major Facilitator Superfamily J4A01_01710 PF01202 Shikimate kinase J4A01_01715 PF05448 Acetyl xylan esterase (AXE1) J4A01_01720 PF10127 RNA repair pathway DNA polymerase beta family J4A01_01725 PF01619 Proline dehydrogenase J4A01_01730 PF00171 Aldehyde dehydrogenase family J4A01_01735 PF00474 Sodium:solute symporter family J4A01_01740 PF17853 GGDEF-like domain J4A01_01740 PF13556 PucR C-terminal helix-turn-helix domain J4A01_01745 PF07992 Pyridine nucleotide-disulphide oxidoreductase J4A01_01750 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases J4A01_01755 PF00355 Rieske [2Fe-2S] domain J4A01_01760 PF04324 BFD-like [2Fe-2S] binding domain J4A01_01760 PF01077 Nitrite and sulphite reductase 4Fe-4S domain J4A01_01760 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain J4A01_01760 PF18267 Rubredoxin NAD+ reductase C-terminal domain J4A01_01760 PF07992 Pyridine nucleotide-disulphide oxidoreductase J4A01_01765 PF04879 Molybdopterin oxidoreductase Fe4S4 domain J4A01_01765 PF00384 Molybdopterin oxidoreductase J4A01_01765 PF01568 Molydopterin dinucleotide binding domain J4A01_01770 PF18267 Rubredoxin NAD+ reductase C-terminal domain J4A01_01770 PF04324 BFD-like [2Fe-2S] binding domain J4A01_01770 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain J4A01_01770 PF07992 Pyridine nucleotide-disulphide oxidoreductase J4A01_01775 PF07690 Major Facilitator Superfamily J4A01_01780 PF07683 Cobalamin synthesis protein cobW C-terminal domain J4A01_01780 PF02492 CobW/HypB/UreG, nucleotide-binding domain J4A01_01785 PF08240 Alcohol dehydrogenase GroES-like domain J4A01_01785 PF13823 Alcohol dehydrogenase GroES-associated J4A01_01785 PF00107 Zinc-binding dehydrogenase J4A01_01790 PF06271 RDD family J4A01_01795 PF10925 Protein of unknown function (DUF2680) J4A01_01800 PF00232 Glycosyl hydrolase family 1 J4A01_01810 PF11033 Competence protein J (ComJ) J4A01_01815 PF14040 Deoxyribonuclease NucA/NucB J4A01_01820 PF01380 SIS domain J4A01_01825 PF00215 Orotidine 5'-phosphate decarboxylase / HUMPS family J4A01_01830 PF01638 HxlR-like helix-turn-helix J4A01_01835 PF13193 AMP-binding enzyme C-terminal domain J4A01_01835 PF00501 AMP-binding enzyme J4A01_01835 PF00668 Condensation domain J4A01_01835 PF00550 Phosphopantetheine attachment site J4A01_01840 PF00501 AMP-binding enzyme J4A01_01840 PF13193 AMP-binding enzyme C-terminal domain J4A01_01840 PF00668 Condensation domain J4A01_01840 PF00550 Phosphopantetheine attachment site J4A01_01845 PF00550 Phosphopantetheine attachment site J4A01_01845 PF00975 Thioesterase domain J4A01_01845 PF00501 AMP-binding enzyme J4A01_01845 PF00668 Condensation domain J4A01_01845 PF13193 AMP-binding enzyme C-terminal domain J4A01_01850 PF00975 Thioesterase domain J4A01_01855 PF07685 CobB/CobQ-like glutamine amidotransferase domain J4A01_01855 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain J4A01_01855 PF00155 Aminotransferase class I and II J4A01_01860 PF01648 4'-phosphopantetheinyl transferase superfamily J4A01_01870 PF00005 ABC transporter J4A01_01875 PF00528 Binding-protein-dependent transport system inner membrane component J4A01_01885 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family J4A01_01885 PF03466 LysR substrate binding domain J4A01_01890 PF02441 Flavoprotein J4A01_01895 PF01977 3-octaprenyl-4-hydroxybenzoate carboxy-lyase J4A01_01910 PF00854 POT family J4A01_01915 PF13229 Right handed beta helix region J4A01_01915 PF12708 Pectate lyase superfamily protein J4A01_01925 PF03323 Bacillus/Clostridium GerA spore germination protein J4A01_01930 PF05504 Spore germination B3/ GerAC like, C-terminal J4A01_01935 PF03845 Spore germination protein J4A01_01940 PF00296 Luciferase-like monooxygenase J4A01_01945 PF00583 Acetyltransferase (GNAT) family J4A01_01950 PF00497 Bacterial extracellular solute-binding proteins, family 3 J4A01_01955 PF00528 Binding-protein-dependent transport system inner membrane component J4A01_01960 PF00005 ABC transporter J4A01_01965 PF07687 Peptidase dimerisation domain J4A01_01965 PF01546 Peptidase family M20/M25/M40 J4A01_01970 PF03972 MmgE/PrpD family J4A01_01975 PF00005 ABC transporter J4A01_01980 PF02687 FtsX-like permease family J4A01_01980 PF12704 MacB-like periplasmic core domain J4A01_01985 PF00072 Response regulator receiver domain J4A01_01985 PF00486 Transcriptional regulatory protein, C terminal J4A01_01990 PF00672 HAMP domain J4A01_01990 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase J4A01_01990 PF00512 His Kinase A (phospho-acceptor) domain J4A01_01995 PF18801 response regulator aspartate phosphatase H, N terminal J4A01_02000 PF11131 Rap-phr extracellular signalling J4A01_02005 PF09680 Family of unknown function J4A01_02010 PF00696 Amino acid kinase family J4A01_02010 PF13840 ACT domain J4A01_02015 PF01032 FecCD transport family J4A01_02020 PF01032 FecCD transport family J4A01_02025 PF00005 ABC transporter J4A01_02030 PF01497 Periplasmic binding protein J4A01_02035 PF07690 Major Facilitator Superfamily J4A01_02040 PF00440 Bacterial regulatory proteins, tetR family J4A01_02045 PF00881 Nitroreductase family J4A01_02050 PF03992 Antibiotic biosynthesis monooxygenase J4A01_02055 PF01022 Bacterial regulatory protein, arsR family J4A01_02060 PF00155 Aminotransferase class I and II J4A01_02060 PF00392 Bacterial regulatory proteins, gntR family J4A01_02065 PF00202 Aminotransferase class-III J4A01_02070 PF00171 Aldehyde dehydrogenase family J4A01_02075 PF06800 Sugar transport protein J4A01_02085 PF07987 Domain of unkown function (DUF1775) J4A01_02090 PF04234 CopC domain J4A01_02090 PF05425 Copper resistance protein D J4A01_02090 PF13115 YtkA-like J4A01_02095 PF05573 NosL J4A01_02095 PF08220 DeoR-like helix-turn-helix domain J4A01_02105 PF02378 Phosphotransferase system, EIIC J4A01_02105 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit J4A01_02110 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 J4A01_02115 PF01232 Mannitol dehydrogenase Rossmann domain J4A01_02115 PF08125 Mannitol dehydrogenase C-terminal domain J4A01_02120 PF07977 FabA-like domain J4A01_02135 PF03746 LamB/YcsF family J4A01_02140 PF01566 Natural resistance-associated macrophage protein J4A01_02145 PF07286 Protein of unknown function (DUF1445) J4A01_02150 PF02682 Carboxyltransferase domain, subdomain C and D J4A01_02155 PF02626 Carboxyltransferase domain, subdomain A and B J4A01_02160 PF01614 Bacterial transcriptional regulator J4A01_02160 PF09339 IclR helix-turn-helix domain J4A01_02165 PF13472 GDSL-like Lipase/Acylhydrolase family J4A01_02170 PF13129 Protein of unknown function (DUF3953) J4A01_02175 PF03992 Antibiotic biosynthesis monooxygenase J4A01_02180 PF05223 NTF2-like N-terminal transpeptidase domain J4A01_02180 PF03717 Penicillin-binding Protein dimerisation domain J4A01_02180 PF00905 Penicillin binding protein transpeptidase domain J4A01_02185 PF00248 Aldo/keto reductase family J4A01_02190 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 J4A01_02190 PF08279 HTH domain J4A01_02190 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit J4A01_02190 PF05043 Mga helix-turn-helix domain J4A01_02190 PF00874 PRD domain J4A01_02195 PF13193 AMP-binding enzyme C-terminal domain J4A01_02195 PF00501 AMP-binding enzyme J4A01_02210 PF13302 Acetyltransferase (GNAT) domain J4A01_02215 PF16242 Pyridoxamine 5'-phosphate oxidase like J4A01_02220 PF10997 Alternate to MurJ J4A01_02225 PF12823 Domain of unknown function (DUF3817) J4A01_02230 PF01037 Lrp/AsnC ligand binding domain J4A01_02235 PF01131 DNA topoisomerase J4A01_02235 PF01751 Toprim domain J4A01_02245 PF00990 Diguanylate cyclase, GGDEF domain J4A01_02250 PF10096 Uncharacterized protein conserved in bacteria (DUF2334) J4A01_02260 PF03170 Bacterial cellulose synthase subunit J4A01_02265 PF13520 Amino acid permease J4A01_02275 PF00205 Thiamine pyrophosphate enzyme, central domain J4A01_02275 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain J4A01_02275 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain J4A01_02300 PF13176 Tetratricopeptide repeat J4A01_02300 PF18801 response regulator aspartate phosphatase H, N terminal J4A01_02320 PF01566 Natural resistance-associated macrophage protein J4A01_02330 PF09954 Uncharacterized protein conserved in bacteria (DUF2188) J4A01_02335 PF17314 Family of unknown function (DUF5360) J4A01_02340 PF00893 Small Multidrug Resistance protein J4A01_02345 PF12787 EcsC protein family J4A01_02350 PF10685 Stress-induced bacterial acidophilic repeat motif J4A01_02350 PF00477 Small hydrophilic plant seed protein J4A01_02355 PF07883 Cupin domain J4A01_02360 PF16291 Domain of unknown function (DUF4937 J4A01_02365 PF05067 Manganese containing catalase J4A01_02370 PF03480 Bacterial extracellular solute-binding protein, family 7 J4A01_02375 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase J4A01_02375 PF17203 Single cache domain 3 J4A01_02375 PF14689 Sensor_kinase_SpoOB-type, alpha-helical domain J4A01_02380 PF08279 HTH domain J4A01_02380 PF00072 Response regulator receiver domain J4A01_02385 PF00375 Sodium:dicarboxylate symporter family J4A01_02390 PF01594 AI-2E family transporter J4A01_02395 PF00005 ABC transporter J4A01_02410 PF02771 Acyl-CoA dehydrogenase, N-terminal domain J4A01_02410 PF08028 Acyl-CoA dehydrogenase, C-terminal domain J4A01_02410 PF02770 Acyl-CoA dehydrogenase, middle domain J4A01_02415 PF13040 Fur-regulated basic protein B J4A01_02425 PF01545 Cation efflux family J4A01_02425 PF16916 Dimerisation domain of Zinc Transporter J4A01_02430 PF00085 Thioredoxin J4A01_02435 PF07478 D-ala D-ala ligase C-terminus J4A01_02435 PF01820 D-ala D-ala ligase N-terminus J4A01_02440 PF01225 Mur ligase family, catalytic domain J4A01_02440 PF02875 Mur ligase family, glutamate ligase domain J4A01_02440 PF08245 Mur ligase middle domain J4A01_02445 PF00270 DEAD/DEAH box helicase J4A01_02445 PF00271 Helicase conserved C-terminal domain J4A01_02450 PF03703 Bacterial PH domain J4A01_02455 PF03703 Bacterial PH domain J4A01_02460 PF01694 Rhomboid family J4A01_02465 PF01648 4'-phosphopantetheinyl transferase superfamily J4A01_02475 PF01168 Alanine racemase, N-terminal domain J4A01_02475 PF00842 Alanine racemase, C-terminal domain J4A01_02480 PF01402 Ribbon-helix-helix protein, copG family J4A01_02485 PF02452 PemK-like, MazF-like toxin of type II toxin-antitoxin system J4A01_02490 PF08678 Rsbr N terminal J4A01_02490 PF01740 STAS domain J4A01_02495 PF01740 STAS domain J4A01_02500 PF13581 Histidine kinase-like ATPase domain J4A01_02505 PF07228 Stage II sporulation protein E (SpoIIE) J4A01_02505 PF08673 Phosphoserine phosphatase RsbU, N-terminal domain J4A01_02510 PF01740 STAS domain J4A01_02515 PF13581 Histidine kinase-like ATPase domain J4A01_02520 PF04545 Sigma-70, region 4 J4A01_02520 PF04539 Sigma-70 region 3 J4A01_02520 PF04542 Sigma-70 region 2 J4A01_02525 PF07228 Stage II sporulation protein E (SpoIIE) J4A01_02530 PF00575 S1 RNA binding domain J4A01_02530 PF17674 HHH domain J4A01_02530 PF16921 Tex protein YqgF-like domain J4A01_02530 PF09371 Tex-like protein N-terminal domain J4A01_02540 PF10263 SprT-like family J4A01_02595 PF04740 LXG domain of WXG superfamily J4A01_02600 PF18801 response regulator aspartate phosphatase H, N terminal J4A01_02615 PF07690 Major Facilitator Superfamily J4A01_02620 PF01047 MarR family J4A01_02630 PF01575 MaoC like domain J4A01_02645 PF02082 Transcriptional regulator J4A01_02650 PF13460 NAD(P)H-binding J4A01_02655 PF00487 Fatty acid desaturase J4A01_02665 PF00313 'Cold-shock' DNA-binding domain J4A01_02670 PF02559 CarD-like/TRCF domain J4A01_02675 PF02583 Metal-sensitive transcriptional repressor J4A01_02680 PF13686 DsrE/DsrF/DrsH-like family J4A01_02685 PF00581 Rhodanese-like domain J4A01_02685 PF12368 Rhodanase C-terminal J4A01_02685 PF17773 UPF0176 acylphosphatase like domain J4A01_02690 PF00581 Rhodanese-like domain J4A01_02690 PF01206 Sulfurtransferase TusA J4A01_02695 PF00753 Metallo-beta-lactamase superfamily J4A01_02695 PF00581 Rhodanese-like domain J4A01_02700 PF01206 Sulfurtransferase TusA J4A01_02705 PF01925 Sulfite exporter TauE/SafE J4A01_02710 PF01177 Asp/Glu/Hydantoin racemase J4A01_02725 PF01734 Patatin-like phospholipase J4A01_02735 PF07883 Cupin domain J4A01_02750 PF08031 Berberine and berberine like J4A01_02750 PF01565 FAD binding domain J4A01_02755 PF01545 Cation efflux family J4A01_02755 PF16916 Dimerisation domain of Zinc Transporter J4A01_02770 PF07883 Cupin domain J4A01_02775 PF12867 DinB superfamily J4A01_02795 PF04055 Radical SAM superfamily J4A01_02810 PF08240 Alcohol dehydrogenase GroES-like domain J4A01_02810 PF00107 Zinc-binding dehydrogenase J4A01_02815 PF13411 MerR HTH family regulatory protein J4A01_02825 PF00155 Aminotransferase class I and II J4A01_02825 PF00392 Bacterial regulatory proteins, gntR family J4A01_02835 PF07690 Major Facilitator Superfamily J4A01_02840 PF16859 Tetracyclin repressor-like, C-terminal domain J4A01_02840 PF00440 Bacterial regulatory proteins, tetR family J4A01_02845 PF00892 EamA-like transporter family J4A01_02850 PF00155 Aminotransferase class I and II J4A01_02850 PF00392 Bacterial regulatory proteins, gntR family J4A01_02855 PF07875 Coat F domain J4A01_02865 PF00107 Zinc-binding dehydrogenase J4A01_02865 PF13823 Alcohol dehydrogenase GroES-associated J4A01_02865 PF08240 Alcohol dehydrogenase GroES-like domain J4A01_02870 PF07875 Coat F domain J4A01_02880 PF07730 Histidine kinase J4A01_02880 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase J4A01_02885 PF00196 Bacterial regulatory proteins, luxR family J4A01_02885 PF00072 Response regulator receiver domain J4A01_02890 PF03176 MMPL family J4A01_02895 PF07722 Peptidase C26 J4A01_02900 PF00005 ABC transporter J4A01_02900 PF12848 ABC transporter J4A01_02905 PF13302 Acetyltransferase (GNAT) domain J4A01_02910 PF10035 Uncharacterized protein conserved in bacteria (DUF2179) J4A01_02910 PF02588 Uncharacterised 5xTM membrane BCR, YitT family COG1284 J4A01_02915 PF00465 Iron-containing alcohol dehydrogenase J4A01_02920 PF07690 Major Facilitator Superfamily J4A01_02925 PF00109 Beta-ketoacyl synthase, N-terminal domain J4A01_02925 PF02801 Beta-ketoacyl synthase, C-terminal domain J4A01_02935 PF01925 Sulfite exporter TauE/SafE J4A01_02940 PF00583 Acetyltransferase (GNAT) family J4A01_02945 PF06445 GyrI-like small molecule binding domain J4A01_02945 PF13411 MerR HTH family regulatory protein J4A01_02950 PF00892 EamA-like transporter family J4A01_02955 PF00293 NUDIX domain J4A01_02960 PF08241 Methyltransferase domain J4A01_02965 PF00180 Isocitrate/isopropylmalate dehydrogenase J4A01_02970 PF07729 FCD domain J4A01_02970 PF00392 Bacterial regulatory proteins, gntR family J4A01_02975 PF00201 UDP-glucoronosyl and UDP-glucosyl transferase J4A01_02990 PF00144 Beta-lactamase J4A01_02990 PF11954 Domain of unknown function (DUF3471) J4A01_03000 PF07563 Protein of unknown function (DUF1541) J4A01_03005 PF07690 Major Facilitator Superfamily J4A01_03010 PF07702 UTRA domain J4A01_03010 PF00392 Bacterial regulatory proteins, gntR family J4A01_03015 PF00392 Bacterial regulatory proteins, gntR family J4A01_03015 PF07729 FCD domain J4A01_03020 PF07690 Major Facilitator Superfamily J4A01_03025 PF00893 Small Multidrug Resistance protein J4A01_03030 PF00893 Small Multidrug Resistance protein J4A01_03035 PF17934 Tetracyclin repressor-like, C-terminal domain J4A01_03035 PF00440 Bacterial regulatory proteins, tetR family J4A01_03040 PF13520 Amino acid permease J4A01_03050 PF08327 Activator of Hsp90 ATPase homolog 1-like protein J4A01_03055 PF00107 Zinc-binding dehydrogenase J4A01_03055 PF08240 Alcohol dehydrogenase GroES-like domain J4A01_03060 PF00083 Sugar (and other) transporter J4A01_03100 PF00586 AIR synthase related protein, N-terminal domain J4A01_03100 PF02769 AIR synthase related protein, C-terminal domain J4A01_03105 PF02367 Threonylcarbamoyl adenosine biosynthesis protein TsaE J4A01_03110 PF00814 Glycoprotease family J4A01_03115 PF00583 Acetyltransferase (GNAT) family J4A01_03120 PF00814 Glycoprotease family J4A01_03125 PF16326 ABC transporter C-terminal domain J4A01_03125 PF00005 ABC transporter J4A01_03125 PF12848 ABC transporter J4A01_03130 PF01967 MoaC family J4A01_03135 PF06971 Putative DNA-binding protein N-terminus J4A01_03135 PF02629 CoA binding domain J4A01_03140 PF02416 mttA/Hcf106 family J4A01_03145 PF00902 Sec-independent protein translocase protein (TatC) J4A01_03150 PF14146 Domain of unknown function (DUF4305) J4A01_03155 PF02517 CPBP intramembrane metalloprotease J4A01_03160 PF00166 Chaperonin 10 Kd subunit J4A01_03165 PF00118 TCP-1/cpn60 chaperonin family J4A01_03175 PF00072 Response regulator receiver domain J4A01_03175 PF00196 Bacterial regulatory proteins, luxR family J4A01_03185 PF00144 Beta-lactamase J4A01_03195 PF00931 NB-ARC domain J4A01_03195 PF13176 Tetratricopeptide repeat J4A01_03200 PF08240 Alcohol dehydrogenase GroES-like domain J4A01_03200 PF00107 Zinc-binding dehydrogenase J4A01_03210 PF00294 pfkB family carbohydrate kinase J4A01_03215 PF14154 Domain of unknown function (DUF4306) J4A01_03220 PF04012 PspA/IM30 family J4A01_03225 PF08271 TFIIB zinc-binding J4A01_03230 PF04536 TPM domain J4A01_03235 PF13421 SPFH domain-Band 7 family J4A01_03240 PF01757 Acyltransferase family J4A01_03245 PF11738 Protein of unknown function (DUF3298) J4A01_03245 PF13739 Deacetylase PdaC J4A01_03250 PF04542 Sigma-70 region 2 J4A01_03250 PF08281 Sigma-70, region 4 J4A01_03255 PF08240 Alcohol dehydrogenase GroES-like domain J4A01_03255 PF00107 Zinc-binding dehydrogenase J4A01_03260 PF03330 Lytic transglycolase J4A01_03265 PF07676 WD40-like Beta Propeller Repeat J4A01_03270 PF14169 Cold-inducible protein YdjO J4A01_03275 PF07732 Multicopper oxidase J4A01_03275 PF00394 Multicopper oxidase J4A01_03275 PF07731 Multicopper oxidase J4A01_03280 PF00324 Amino acid permease J4A01_03285 PF07726 ATPase family associated with various cellular activities (AAA) J4A01_03285 PF17863 AAA lid domain J4A01_03290 PF01882 Protein of unknown function DUF58 J4A01_03295 PF11992 Domain of unknown function (DUF3488) J4A01_03295 PF13559 Domain of unknown function (DUF4129) J4A01_03295 PF01841 Transglutaminase-like superfamily J4A01_03300 PF00117 Glutamine amidotransferase class-I J4A01_03300 PF00958 GMP synthase C terminal domain J4A01_03300 PF02540 NAD synthase J4A01_03310 PF04542 Sigma-70 region 2 J4A01_03310 PF04545 Sigma-70, region 4 J4A01_03320 PF00860 Permease family J4A01_03330 PF13076 Fur-regulated basic protein A J4A01_03335 PF10035 Uncharacterized protein conserved in bacteria (DUF2179) J4A01_03340 PF14044 NETI protein J4A01_03345 PF00731 AIR carboxylase J4A01_03350 PF02222 ATP-grasp domain J4A01_03350 PF17769 Phosphoribosylaminoimidazole carboxylase C-terminal domain J4A01_03355 PF00206 Lyase J4A01_03355 PF10397 Adenylosuccinate lyase C-terminus J4A01_03360 PF01259 SAICAR synthetase J4A01_03365 PF02700 Phosphoribosylformylglycinamidine (FGAM) synthase J4A01_03375 PF00586 AIR synthase related protein, N-terminal domain J4A01_03375 PF02769 AIR synthase related protein, C-terminal domain J4A01_03375 PF18072 Formylglycinamide ribonucleotide amidotransferase linker domain J4A01_03380 PF00156 Phosphoribosyl transferase domain J4A01_03385 PF00586 AIR synthase related protein, N-terminal domain J4A01_03385 PF02769 AIR synthase related protein, C-terminal domain J4A01_03390 PF00551 Formyl transferase J4A01_03395 PF01808 AICARFT/IMPCHase bienzyme J4A01_03395 PF02142 MGS-like domain J4A01_03400 PF01071 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain J4A01_03400 PF02843 Phosphoribosylglycinamide synthetase, C domain J4A01_03400 PF02844 Phosphoribosylglycinamide synthetase, N domain J4A01_03405 PF11127 Protein of unknown function (DUF2892) J4A01_03410 PF13382 Adenine deaminase C-terminal domain J4A01_03410 PF01979 Amidohydrolase family J4A01_03415 PF11258 Protein of unknown function (DUF3048) N-terminal domain J4A01_03415 PF17479 Protein of unknown function (DUF3048) C-terminal domain J4A01_03420 PF01371 Trp repressor protein J4A01_03425 PF01645 Conserved region in glutamate synthase J4A01_03430 PF01884 PcrB family J4A01_03435 PF00580 UvrD/REP helicase N-terminal domain J4A01_03435 PF13361 UvrD-like helicase C-terminal domain J4A01_03440 PF12826 Helix-hairpin-helix motif J4A01_03440 PF03119 NAD-dependent DNA ligase C4 zinc finger domain J4A01_03440 PF01653 NAD-dependent DNA ligase adenylation domain J4A01_03440 PF00533 BRCA1 C Terminus (BRCT) domain J4A01_03440 PF03120 NAD-dependent DNA ligase OB-fold domain J4A01_03445 PF07537 CamS sex pheromone cAM373 precursor J4A01_03450 PF01636 Phosphotransferase enzyme family J4A01_03455 PF02308 MgtC family J4A01_03460 PF00474 Sodium:solute symporter family J4A01_03465 PF02686 Glu-tRNAGln amidotransferase C subunit J4A01_03470 PF01425 Amidase J4A01_03475 PF02934 GatB/GatE catalytic domain J4A01_03475 PF02637 GatB domain J4A01_03480 PF00440 Bacterial regulatory proteins, tetR family J4A01_03485 PF00873 AcrB/AcrD/AcrF family J4A01_03490 PF00781 Diacylglycerol kinase catalytic domain J4A01_03495 PF01938 TRAM domain J4A01_03495 PF05958 tRNA (Uracil-5-)-methyltransferase J4A01_03505 PF00005 ABC transporter J4A01_03520 PF04634 Protein of unknown function, DUF600 J4A01_03525 PF04634 Protein of unknown function, DUF600 J4A01_03530 PF04634 Protein of unknown function, DUF600 J4A01_03535 PF04634 Protein of unknown function, DUF600 J4A01_03540 PF04634 Protein of unknown function, DUF600 J4A01_03545 PF04740 LXG domain of WXG superfamily J4A01_03550 PF01709 Transcriptional regulator J4A01_03560 PF04439 Streptomycin adenylyltransferase J4A01_03565 PF11007 Spore coat associated protein JA (CotJA) J4A01_03570 PF12652 CotJB protein J4A01_03575 PF05067 Manganese containing catalase J4A01_03580 PF00583 Acetyltransferase (GNAT) family J4A01_03590 PF04239 Protein of unknown function (DUF421) J4A01_03595 PF03992 Antibiotic biosynthesis monooxygenase J4A01_03600 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily J4A01_03605 PF14361 RsbT co-antagonist protein rsbRD N-terminal domain J4A01_03605 PF01740 STAS domain J4A01_03610 PF10055 Uncharacterized small protein (DUF2292) J4A01_03615 PF01687 Riboflavin kinase J4A01_03620 PF01027 Inhibitor of apoptosis-promoting Bax1 J4A01_03625 PF01047 MarR family J4A01_03630 PF01494 FAD binding domain J4A01_03635 PF13039 Protein of unknown function (DUF3900) J4A01_03635 PF13037 Domain of unknown function (DUF3898) J4A01_03640 PF00067 Cytochrome P450 J4A01_03640 PF00258 Flavodoxin J4A01_03640 PF00175 Oxidoreductase NAD-binding domain J4A01_03640 PF00667 FAD binding domain J4A01_03645 PF00884 Sulfatase J4A01_03650 PF00483 Nucleotidyl transferase J4A01_03655 PF16363 GDP-mannose 4,6 dehydratase J4A01_03660 PF03407 Nucleotide-diphospho-sugar transferase J4A01_03665 PF00535 Glycosyl transferase family 2 J4A01_03670 PF03407 Nucleotide-diphospho-sugar transferase J4A01_03675 PF07690 Major Facilitator Superfamily J4A01_03680 PF13520 Amino acid permease J4A01_03685 PF00171 Aldehyde dehydrogenase family J4A01_03690 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain J4A01_03700 PF00535 Glycosyl transferase family 2 J4A01_03700 PF13181 Tetratricopeptide repeat J4A01_03705 PF12848 ABC transporter J4A01_03705 PF00005 ABC transporter J4A01_03705 PF16326 ABC transporter C-terminal domain J4A01_03710 PF13411 MerR HTH family regulatory protein J4A01_03715 PF07690 Major Facilitator Superfamily J4A01_03720 PF12848 ABC transporter J4A01_03720 PF00005 ABC transporter J4A01_03725 PF00270 DEAD/DEAH box helicase J4A01_03725 PF00271 Helicase conserved C-terminal domain J4A01_03730 PF00583 Acetyltransferase (GNAT) family J4A01_03735 PF00107 Zinc-binding dehydrogenase J4A01_03735 PF16884 N-terminal domain of oxidoreductase J4A01_03740 PF11486 Protein of unknown function (DUF3212) J4A01_03745 PF11181 Heat induced stress protein YflT J4A01_03750 PF00544 Pectate lyase J4A01_03755 PF00939 Sodium:sulfate symporter transmembrane region J4A01_03775 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase J4A01_03775 PF14689 Sensor_kinase_SpoOB-type, alpha-helical domain J4A01_03780 PF08279 HTH domain J4A01_03780 PF12431 Transcriptional regulator J4A01_03780 PF00072 Response regulator receiver domain J4A01_03785 PF03401 Tripartite tricarboxylate transporter family receptor J4A01_03790 PF03600 Citrate transporter J4A01_03795 PF00753 Metallo-beta-lactamase superfamily J4A01_03800 PF02898 Nitric oxide synthase, oxygenase domain J4A01_03805 PF00708 Acylphosphatase J4A01_03810 PF03475 3-alpha domain J4A01_03810 PF03473 MOSC domain J4A01_03815 PF11121 Protein of unknown function (DUF2639) J4A01_03825 PF11588 Protein of unknown function (DUF3243) J4A01_03830 PF00557 Metallopeptidase family M24 J4A01_03835 PF00367 phosphotransferase system, EIIB J4A01_03835 PF02378 Phosphotransferase system, EIIC J4A01_03840 PF10787 Uncharacterised protein from bacillus cereus group J4A01_03845 PF00884 Sulfatase J4A01_03850 PF09350 Domain of unknown function (DUF1992) J4A01_03855 PF00011 Hsp20/alpha crystallin family J4A01_03860 PF10676 Spore germination protein gerPA/gerPF J4A01_03865 PF10676 Spore germination protein gerPA/gerPF J4A01_03870 PF00367 phosphotransferase system, EIIB J4A01_03870 PF02378 Phosphotransferase system, EIIC J4A01_03875 PF16657 Maltogenic Amylase, C-terminal domain J4A01_03875 PF00128 Alpha amylase, catalytic domain J4A01_03880 PF07702 UTRA domain J4A01_03880 PF00392 Bacterial regulatory proteins, gntR family J4A01_03885 PF00881 Nitroreductase family J4A01_03900 PF00149 Calcineurin-like phosphoesterase J4A01_03900 PF02872 5'-nucleotidase, C-terminal domain J4A01_03905 PF01965 DJ-1/PfpI family J4A01_03910 PF00356 Bacterial regulatory proteins, lacI family J4A01_03915 PF18317 Shikimate 5'-dehydrogenase C-terminal domain J4A01_03915 PF08501 Shikimate dehydrogenase substrate binding domain J4A01_03920 PF01487 Type I 3-dehydroquinase J4A01_03925 PF07690 Major Facilitator Superfamily J4A01_03930 PF06569 Protein of unknown function (DUF1128) J4A01_03935 PF01451 Low molecular weight phosphotyrosine protein phosphatase J4A01_03945 PF03631 Virulence factor BrkB J4A01_03950 PF07690 Major Facilitator Superfamily J4A01_03955 PF01699 Sodium/calcium exchanger protein J4A01_03960 PF14167 YfkD-like protein J4A01_03965 PF00924 Mechanosensitive ion channel J4A01_03970 PF04055 Radical SAM superfamily J4A01_03970 PF08756 YfkB-like domain J4A01_03980 PF01522 Polysaccharide deacetylase J4A01_03985 PF00005 ABC transporter J4A01_03995 PF01569 PAP2 superfamily J4A01_04000 PF00486 Transcriptional regulatory protein, C terminal J4A01_04000 PF00072 Response regulator receiver domain J4A01_04005 PF00512 His Kinase A (phospho-acceptor) domain J4A01_04005 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase J4A01_04010 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase J4A01_04010 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase J4A01_04020 PF01544 CorA-like Mg2+ transporter protein J4A01_04025 PF00730 HhH-GPD superfamily base excision DNA repair protein J4A01_04030 PF01938 TRAM domain J4A01_04030 PF05958 tRNA (Uracil-5-)-methyltransferase J4A01_04035 PF14118 YfzA-like protein J4A01_04040 PF01207 Dihydrouridine synthase (Dus) J4A01_04050 PF00676 Dehydrogenase E1 component J4A01_04055 PF02779 Transketolase, pyrimidine binding domain J4A01_04055 PF02780 Transketolase, C-terminal domain J4A01_04060 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) J4A01_04060 PF00364 Biotin-requiring enzyme J4A01_04060 PF02817 e3 binding domain J4A01_04065 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain J4A01_04065 PF07992 Pyridine nucleotide-disulphide oxidoreductase J4A01_04070 PF02954 Bacterial regulatory protein, Fis family J4A01_04070 PF01590 GAF domain J4A01_04070 PF00158 Sigma-54 interaction domain J4A01_04075 PF08141 Small acid-soluble spore protein H family J4A01_04080 PF02056 Family 4 glycosyl hydrolase J4A01_04080 PF11975 Family 4 glycosyl hydrolase C-terminal domain J4A01_04085 PF01418 Helix-turn-helix domain, rpiR family J4A01_04085 PF01380 SIS domain J4A01_04090 PF00367 phosphotransferase system, EIIB J4A01_04090 PF02378 Phosphotransferase system, EIIC J4A01_04100 PF00005 ABC transporter J4A01_04100 PF00664 ABC transporter transmembrane region J4A01_04105 PF00664 ABC transporter transmembrane region J4A01_04105 PF00005 ABC transporter J4A01_04110 PF07681 DoxX J4A01_04115 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily J4A01_04120 PF01040 UbiA prenyltransferase family J4A01_04125 PF10400 Virulence activator alpha C-term J4A01_04125 PF03551 Transcriptional regulator PadR-like family J4A01_04130 PF02525 Flavodoxin-like fold J4A01_04135 PF01757 Acyltransferase family J4A01_04140 PF01326 Pyruvate phosphate dikinase, PEP/pyruvate binding domain J4A01_04140 PF00391 PEP-utilising enzyme, mobile domain J4A01_04145 PF01337 Barstar (barnase inhibitor) J4A01_04150 PF12867 DinB superfamily J4A01_04155 PF07690 Major Facilitator Superfamily J4A01_04160 PF01047 MarR family J4A01_04165 PF09924 Uncharacterised conserved protein (DUF2156) J4A01_04165 PF03706 Lysylphosphatidylglycerol synthase TM region J4A01_04170 PF02567 Phenazine biosynthesis-like protein J4A01_04175 PF00881 Nitroreductase family J4A01_04180 PF14151 YfhD-like protein J4A01_04185 PF14152 YfhE-like protein J4A01_04190 PF08338 Domain of unknown function (DUF1731) J4A01_04190 PF01370 NAD dependent epimerase/dehydratase family J4A01_04195 PF02631 RecX family J4A01_04200 PF08838 Protein of unknown function (DUF1811) J4A01_04205 PF07690 Major Facilitator Superfamily J4A01_04210 PF10794 Protein of unknown function (DUF2606) J4A01_04215 PF00089 Trypsin J4A01_04220 PF08176 Small acid-soluble spore protein K family J4A01_04225 PF14043 WVELL protein J4A01_04230 PF08239 Bacterial SH3 domain J4A01_04235 PF13630 SdpI/YhfL protein family J4A01_04240 PF00561 alpha/beta hydrolase fold J4A01_04245 PF00535 Glycosyl transferase family 2 J4A01_04250 PF09586 Bacterial membrane protein YfhO J4A01_04255 PF04307 LexA-binding, inner membrane-associated putative hydrolase J4A01_04260 PF00730 HhH-GPD superfamily base excision DNA repair protein J4A01_04260 PF14815 NUDIX domain J4A01_04275 PF04259 Small, acid-soluble spore protein, gamma-type J4A01_04280 PF14182 YgaB-like protein J4A01_04285 PF04167 Protein of unknown function (DUF402) J4A01_04290 PF00005 ABC transporter J4A01_04290 PF00664 ABC transporter transmembrane region J4A01_04295 PF06081 Aromatic acid exporter family member 1 J4A01_04300 PF00202 Aminotransferase class-III J4A01_04305 PF00578 AhpC/TSA family J4A01_04310 PF01475 Ferric uptake regulator family J4A01_04315 PF11023 Zinc-ribbon containing domain J4A01_04320 PF14540 Nucleotidyltransferase-like J4A01_04320 PF18576 Helix-turn-helix domain J4A01_04425 PF03575 Peptidase family S51 J4A01_04430 PF13667 ThiC-associated domain J4A01_04430 PF01964 Radical SAM ThiC family J4A01_04435 PF08031 Berberine and berberine like J4A01_04435 PF01565 FAD binding domain J4A01_04440 PF13040 Fur-regulated basic protein B J4A01_04445 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle J4A01_04450 PF00528 Binding-protein-dependent transport system inner membrane component J4A01_04455 PF00528 Binding-protein-dependent transport system inner membrane component J4A01_04455 PF12911 N-terminal TM domain of oligopeptide transport permease C J4A01_04460 PF08352 Oligopeptide/dipeptide transporter, C-terminal region J4A01_04460 PF00005 ABC transporter J4A01_04465 PF00005 ABC transporter J4A01_04465 PF08352 Oligopeptide/dipeptide transporter, C-terminal region J4A01_04470 PF00199 Catalase J4A01_04470 PF06628 Catalase-related immune-responsive J4A01_04480 PF00005 ABC transporter J4A01_04485 PF09084 NMT1/THI5 like J4A01_04490 PF00528 Binding-protein-dependent transport system inner membrane component J4A01_04495 PF00296 Luciferase-like monooxygenase J4A01_04500 PF00253 Ribosomal protein S14p/S29e J4A01_04510 PF01381 Helix-turn-helix J4A01_04525 PF08331 Domain of unknown function (DUF1730) J4A01_04530 PF12671 Putative amidase domain J4A01_04535 PF00588 SpoU rRNA Methylase family J4A01_04540 PF13171 Protein of unknown function (DUF4004) J4A01_04545 PF04519 Polymer-forming cytoskeletal J4A01_04555 PF08298 PrkA AAA domain J4A01_04555 PF06798 PrkA serine protein kinase C-terminal domain J4A01_04560 PF04285 Protein of unknown function (DUF444) J4A01_04565 PF01047 MarR family J4A01_04575 PF07690 Major Facilitator Superfamily J4A01_04580 PF03358 NADPH-dependent FMN reductase J4A01_04595 PF12679 ABC-2 family transporter protein J4A01_04600 PF00313 'Cold-shock' DNA-binding domain J4A01_04605 PF03180 NLPA lipoprotein J4A01_04610 PF07694 5TMR of 5TMR-LYT J4A01_04610 PF00990 Diguanylate cyclase, GGDEF domain J4A01_04615 PF00375 Sodium:dicarboxylate symporter family J4A01_04625 PF09580 Sporulation lipoprotein YhcN/YlaJ (Spore_YhcN_YlaJ) J4A01_04635 PF07875 Coat F domain J4A01_04640 PF02872 5'-nucleotidase, C-terminal domain J4A01_04640 PF00565 Staphylococcal nuclease homologue J4A01_04640 PF00746 LPXTG cell wall anchor motif J4A01_04640 PF00149 Calcineurin-like phosphoesterase J4A01_04645 PF04203 Sortase domain J4A01_04650 PF01479 S4 domain J4A01_04650 PF00849 RNA pseudouridylate synthase J4A01_04655 PF17326 Family of unknown function (DUF5365) J4A01_04660 PF00571 CBS domain J4A01_04665 PF13419 Haloacid dehalogenase-like hydrolase J4A01_04670 PF00583 Acetyltransferase (GNAT) family J4A01_04670 PF00795 Carbon-nitrogen hydrolase J4A01_04675 PF00202 Aminotransferase class-III J4A01_04680 PF04309 Glycerol-3-phosphate responsive antiterminator J4A01_04685 PF00230 Major intrinsic protein J4A01_04690 PF02782 FGGY family of carbohydrate kinases, C-terminal domain J4A01_04690 PF00370 FGGY family of carbohydrate kinases, N-terminal domain J4A01_04695 PF01266 FAD dependent oxidoreductase J4A01_04695 PF16901 C-terminal domain of alpha-glycerophosphate oxidase J4A01_04700 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I J4A01_04700 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II J4A01_04700 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III J4A01_04700 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain J4A01_04705 PF07730 Histidine kinase J4A01_04705 PF13185 GAF domain J4A01_04710 PF00196 Bacterial regulatory proteins, luxR family J4A01_04710 PF00072 Response regulator receiver domain J4A01_04715 PF03358 NADPH-dependent FMN reductase J4A01_04720 PF14148 YhdB-like protein J4A01_04725 PF13028 Protein of unknown function (DUF3889) J4A01_04730 PF00877 NlpC/P60 family J4A01_04730 PF01476 LysM domain J4A01_04735 PF02082 Transcriptional regulator J4A01_04740 PF05552 Conserved TM helix J4A01_04745 PF04293 SpoVR like protein J4A01_04750 PF00245 Alkaline phosphatase J4A01_04755 PF01476 LysM domain J4A01_04755 PF00877 NlpC/P60 family J4A01_04760 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family J4A01_04760 PF03466 LysR substrate binding domain J4A01_04765 PF00285 Citrate synthase, C-terminal domain J4A01_04775 PF13520 Amino acid permease J4A01_04780 PF00209 Sodium:neurotransmitter symporter family J4A01_04785 PF17453 Sigma-M inhibitor J4A01_04790 PF13791 Sigma factor regulator C-terminal J4A01_04790 PF13800 Sigma factor regulator N-terminal J4A01_04795 PF04542 Sigma-70 region 2 J4A01_04795 PF08281 Sigma-70, region 4 J4A01_04800 PF01553 Acyltransferase J4A01_04805 PF00571 CBS domain J4A01_04805 PF03471 Transporter associated domain J4A01_04805 PF01595 Cyclin M transmembrane N-terminal domain J4A01_04810 PF13411 MerR HTH family regulatory protein J4A01_04815 PF00155 Aminotransferase class I and II J4A01_04820 PF00109 Beta-ketoacyl synthase, N-terminal domain J4A01_04820 PF02801 Beta-ketoacyl synthase, C-terminal domain J4A01_04825 PF01595 Cyclin M transmembrane N-terminal domain J4A01_04825 PF00571 CBS domain J4A01_04825 PF03471 Transporter associated domain J4A01_04830 PF02537 CrcB-like protein, Camphor Resistance (CrcB) J4A01_04835 PF02537 CrcB-like protein, Camphor Resistance (CrcB) J4A01_04840 PF03009 Glycerophosphoryl diester phosphodiesterase family J4A01_04845 PF17444 Uncharacterized YhdX-like J4A01_04850 PF00924 Mechanosensitive ion channel J4A01_04855 PF02146 Sir2 family J4A01_04860 PF01522 Polysaccharide deacetylase J4A01_04865 PF01063 Amino-transferase class IV J4A01_04870 PF13977 BetI-type transcriptional repressor, C-terminal J4A01_04870 PF00440 Bacterial regulatory proteins, tetR family J4A01_04880 PF00582 Universal stress protein family J4A01_04885 PF00664 ABC transporter transmembrane region J4A01_04885 PF00005 ABC transporter J4A01_04890 PF00664 ABC transporter transmembrane region J4A01_04890 PF00005 ABC transporter J4A01_04895 PF13460 NAD(P)H-binding J4A01_04900 PF00269 Small, acid-soluble spore proteins, alpha/beta type J4A01_04905 PF17277 Family of unknown function (DUF5342) J4A01_04910 PF14398 YheC/D like ATP-grasp J4A01_04915 PF14398 YheC/D like ATP-grasp J4A01_04920 PF04286 Protein of unknown function (DUF445) J4A01_04925 PF06133 Control of competence regulator ComK, YlbF/YmcA J4A01_04930 PF08713 DNA alkylation repair enzyme J4A01_04940 PF04055 Radical SAM superfamily J4A01_04945 PF13434 L-lysine 6-monooxygenase (NADPH-requiring) J4A01_04950 PF00999 Sodium/hydrogen exchanger family J4A01_04955 PF02080 TrkA-C domain J4A01_04965 PF00378 Enoyl-CoA hydratase/isomerase J4A01_04970 PF14120 YhzD-like protein J4A01_04975 PF13732 Domain of unknown function (DUF4162) J4A01_04975 PF00005 ABC transporter J4A01_04985 PF00149 Calcineurin-like phosphoesterase J4A01_04990 PF13514 AAA domain J4A01_04995 PF01966 HD domain J4A01_05000 PF14147 Sporulation protein YhaL J4A01_05010 PF09680 Family of unknown function J4A01_05015 PF09680 Family of unknown function J4A01_05025 PF11667 Putative zincin peptidase J4A01_05030 PF08963 Protein of unknown function (DUF1878) J4A01_05035 PF01047 MarR family J4A01_05040 PF12732 YtxH-like protein J4A01_05050 PF17099 Tryptophan transporter TrpP J4A01_05055 PF00266 Aminotransferase class-V J4A01_05060 PF01230 HIT domain J4A01_05065 PF00005 ABC transporter J4A01_05070 PF05975 Bacterial ABC transporter protein EcsB J4A01_05075 PF12787 EcsC protein family J4A01_05080 PF07687 Peptidase dimerisation domain J4A01_05080 PF01546 Peptidase family M20/M25/M40 J4A01_05090 PF03992 Antibiotic biosynthesis monooxygenase J4A01_05095 PF00905 Penicillin binding protein transpeptidase domain J4A01_05095 PF00912 Transglycosylase J4A01_05100 PF01208 Uroporphyrinogen decarboxylase (URO-D) J4A01_05105 PF00762 Ferrochelatase J4A01_05110 PF01593 Flavin containing amine oxidoreductase J4A01_05115 PF17932 Tetracyclin repressor-like, C-terminal domain J4A01_05115 PF00440 Bacterial regulatory proteins, tetR family J4A01_05125 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal J4A01_05125 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III J4A01_05135 PF05343 M42 glutamyl aminopeptidase J4A01_05140 PF00375 Sodium:dicarboxylate symporter family J4A01_05145 PF14149 YhfH-like protein J4A01_05150 PF12706 Beta-lactamase superfamily domain J4A01_05155 PF03099 Biotin/lipoate A/B protein ligase family J4A01_05155 PF10437 Bacterial lipoate protein ligase C-terminus J4A01_05160 PF13460 NAD(P)H-binding J4A01_05165 PF00501 AMP-binding enzyme J4A01_05165 PF13193 AMP-binding enzyme C-terminal domain J4A01_05175 PF01435 Peptidase family M48 J4A01_05175 PF16491 CAAX prenyl protease N-terminal, five membrane helices J4A01_05180 PF05922 Peptidase inhibitor I9 J4A01_05180 PF00082 Subtilase family J4A01_05185 PF01497 Periplasmic binding protein J4A01_05190 PF00300 Histidine phosphatase superfamily (branch 1) J4A01_05195 PF02803 Thiolase, C-terminal domain J4A01_05195 PF00108 Thiolase, N-terminal domain J4A01_05200 PF00501 AMP-binding enzyme J4A01_05200 PF13193 AMP-binding enzyme C-terminal domain J4A01_05205 PF02632 BioY family J4A01_05210 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain J4A01_05215 PF01266 FAD dependent oxidoreductase J4A01_05215 PF00355 Rieske [2Fe-2S] domain J4A01_05225 PF08858 IDEAL domain J4A01_05230 PF06338 ComK protein J4A01_05240 PF08818 Domain of unknown function (DU1801) J4A01_05245 PF15493 Domain of unknown function, YrpD J4A01_05250 PF05901 Excalibur calcium-binding domain J4A01_05255 PF01906 Putative heavy-metal-binding J4A01_05260 PF00474 Sodium:solute symporter family J4A01_05265 PF11755 Protein of unknown function (DUF3311) J4A01_05275 PF09335 SNARE associated Golgi protein J4A01_05280 PF10502 Signal peptidase, peptidase S26 J4A01_05285 PF01494 FAD binding domain J4A01_05290 PF01047 MarR family J4A01_05295 PF05145 Transition state regulatory protein AbrB J4A01_05300 PF07690 Major Facilitator Superfamily J4A01_05305 PF00440 Bacterial regulatory proteins, tetR family J4A01_05305 PF08361 MAATS-type transcriptional repressor, C-terminal region J4A01_05310 PF02915 Rubrerythrin J4A01_05315 PF04239 Protein of unknown function (DUF421) J4A01_05320 PF12705 PD-(D/E)XK nuclease superfamily J4A01_05320 PF13361 UvrD-like helicase C-terminal domain J4A01_05325 PF12705 PD-(D/E)XK nuclease superfamily J4A01_05325 PF00580 UvrD/REP helicase N-terminal domain J4A01_05325 PF13361 UvrD-like helicase C-terminal domain J4A01_05330 PF00149 Calcineurin-like phosphoesterase J4A01_05330 PF12320 Type 5 capsule protein repressor C-terminal domain J4A01_05335 PF13476 AAA domain J4A01_05345 PF10676 Spore germination protein gerPA/gerPF J4A01_05350 PF10970 Spore germination protein GerPE J4A01_05360 PF10737 Spore germination protein GerPC J4A01_05365 PF10803 Spore germination GerPB J4A01_05370 PF10676 Spore germination protein gerPA/gerPF J4A01_05375 PF09388 Spo0E like sporulation regulatory protein J4A01_05380 PF01557 Fumarylacetoacetate (FAA) hydrolase family J4A01_05385 PF07457 Protein of unknown function (DUF1516) J4A01_05390 PF10949 Protein of unknown function (DUF2777) J4A01_05395 PF00733 Asparagine synthase J4A01_05395 PF13537 Glutamine amidotransferase domain J4A01_05405 PF01554 MatE J4A01_05410 PF02311 AraC-like ligand binding domain J4A01_05410 PF12833 Helix-turn-helix domain J4A01_05420 PF05163 DinB family J4A01_05425 PF01810 LysE type translocator J4A01_05430 PF00155 Aminotransferase class I and II J4A01_05430 PF00392 Bacterial regulatory proteins, gntR family J4A01_05435 PF13599 Pentapeptide repeats (9 copies) J4A01_05440 PF13673 Acetyltransferase (GNAT) domain J4A01_05445 PF02219 Methylenetetrahydrofolate reductase J4A01_05445 PF02574 Homocysteine S-methyltransferase J4A01_05450 PF04461 Protein of unknown function (DUF520) J4A01_05455 PF17783 CvfB-like winged helix domain J4A01_05455 PF13509 S1 domain J4A01_05460 PF02608 ABC transporter substrate-binding protein PnrA-like J4A01_05465 PF12729 Four helix bundle sensory module for signal transduction J4A01_05465 PF00672 HAMP domain J4A01_05465 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain J4A01_05470 PF00067 Cytochrome P450 J4A01_05480 PF02645 Uncharacterised protein, DegV family COG1307 J4A01_05485 PF02588 Uncharacterised 5xTM membrane BCR, YitT family COG1284 J4A01_05485 PF10035 Uncharacterized protein conserved in bacteria (DUF2179) J4A01_05490 PF12690 Intracellular proteinase inhibitor J4A01_05495 PF12758 Protein of unknown function (DUF3813) J4A01_05510 PF00326 Prolyl oligopeptidase family J4A01_05515 PF01883 Iron-sulfur cluster assembly protein J4A01_05520 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily J4A01_05525 PF01565 FAD binding domain J4A01_05530 PF07690 Major Facilitator Superfamily J4A01_05535 PF02774 Semialdehyde dehydrogenase, dimerisation domain J4A01_05535 PF01118 Semialdehyde dehydrogenase, NAD binding domain J4A01_05540 PF01960 ArgJ family J4A01_05545 PF00696 Amino acid kinase family J4A01_05550 PF00202 Aminotransferase class-III J4A01_05555 PF00117 Glutamine amidotransferase class-I J4A01_05555 PF00988 Carbamoyl-phosphate synthase small chain, CPSase domain J4A01_05560 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain J4A01_05560 PF02787 Carbamoyl-phosphate synthetase large chain, oligomerisation domain J4A01_05565 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain J4A01_05565 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain J4A01_05570 PF14168 YjzC-like protein J4A01_05575 PF11151 Protein of unknown function (DUF2929) J4A01_05590 PF02608 ABC transporter substrate-binding protein PnrA-like J4A01_05595 PF10815 ComZ J4A01_05605 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III J4A01_05605 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal J4A01_05610 PF02801 Beta-ketoacyl synthase, C-terminal domain J4A01_05610 PF00109 Beta-ketoacyl synthase, N-terminal domain J4A01_05615 PF10026 Predicted Zn-dependent protease (DUF2268) J4A01_05620 PF08352 Oligopeptide/dipeptide transporter, C-terminal region J4A01_05620 PF00005 ABC transporter J4A01_05625 PF08352 Oligopeptide/dipeptide transporter, C-terminal region J4A01_05625 PF00005 ABC transporter J4A01_05630 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle J4A01_05635 PF00528 Binding-protein-dependent transport system inner membrane component J4A01_05640 PF00528 Binding-protein-dependent transport system inner membrane component J4A01_05640 PF12911 N-terminal TM domain of oligopeptide transport permease C J4A01_05645 PF12227 Protein of unknown function (DUF3603) J4A01_05650 PF00579 tRNA synthetases class I (W and Y) J4A01_05655 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle J4A01_05660 PF00528 Binding-protein-dependent transport system inner membrane component J4A01_05665 PF12911 N-terminal TM domain of oligopeptide transport permease C J4A01_05665 PF00528 Binding-protein-dependent transport system inner membrane component J4A01_05670 PF08352 Oligopeptide/dipeptide transporter, C-terminal region J4A01_05670 PF00005 ABC transporter J4A01_05675 PF00005 ABC transporter J4A01_05675 PF08352 Oligopeptide/dipeptide transporter, C-terminal region J4A01_05685 PF13508 Acetyltransferase (GNAT) domain J4A01_05690 PF03960 ArsC family J4A01_05695 PF03741 Integral membrane protein TerC family J4A01_05705 PF05389 Negative regulator of genetic competence (MecA) J4A01_05710 PF06054 Competence protein CoiA-like family J4A01_05715 PF08439 Oligopeptidase F J4A01_05715 PF01432 Peptidase family M3 J4A01_05730 PF01152 Bacterial-like globin J4A01_05735 PF01464 Transglycosylase SLT domain J4A01_05740 PF01928 CYTH domain J4A01_05750 PF04607 Region found in RelA / SpoT proteins J4A01_05755 PF01513 ATP-NAD kinase J4A01_05760 PF00849 RNA pseudouridylate synthase J4A01_05765 PF00149 Calcineurin-like phosphoesterase J4A01_05770 PF00999 Sodium/hydrogen exchanger family J4A01_05770 PF02080 TrkA-C domain J4A01_05770 PF02254 TrkA-N domain J4A01_05775 PF03070 TENA/THI-4/PQQC family J4A01_05780 PF02581 Thiamine monophosphate synthase J4A01_05785 PF01266 FAD dependent oxidoreductase J4A01_05790 PF02597 ThiS family J4A01_05795 PF05690 Thiazole biosynthesis protein ThiG J4A01_05800 PF00899 ThiF family J4A01_05805 PF08543 Phosphomethylpyrimidine kinase J4A01_05815 PF14153 Spore coat protein CotO J4A01_05820 PF10612 Spore coat protein Z J4A01_05825 PF10612 Spore coat protein Z J4A01_05830 PF07552 Spore Coat Protein X and V domain J4A01_05840 PF07552 Spore Coat Protein X and V domain J4A01_05845 PF07098 Protein of unknown function (DUF1360) J4A01_05860 PF14069 Stage VI sporulation protein F J4A01_05865 PF00580 UvrD/REP helicase N-terminal domain J4A01_05865 PF13361 UvrD-like helicase C-terminal domain J4A01_05875 PF00753 Metallo-beta-lactamase superfamily J4A01_05885 PF00005 ABC transporter J4A01_05895 PF13673 Acetyltransferase (GNAT) domain J4A01_05905 PF00756 Putative esterase J4A01_05910 PF01053 Cys/Met metabolism PLP-dependent enzyme J4A01_05915 PF01053 Cys/Met metabolism PLP-dependent enzyme J4A01_05930 PF18593 CdiI immunity protein J4A01_05945 PF14411 A nuclease of the HNH/ENDO VII superfamily with conserved LHH J4A01_05945 PF04740 LXG domain of WXG superfamily J4A01_05955 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily J4A01_05965 PF03992 Antibiotic biosynthesis monooxygenase J4A01_05970 PF07690 Major Facilitator Superfamily J4A01_05975 PF01047 MarR family J4A01_05980 PF07745 Glycosyl hydrolase family 53 J4A01_05985 PF02744 Galactose-1-phosphate uridyl transferase, C-terminal domain J4A01_05985 PF01087 Galactose-1-phosphate uridyl transferase, N-terminal domain J4A01_05990 PF16363 GDP-mannose 4,6 dehydratase J4A01_05995 PF10509 Galactokinase galactose-binding signature J4A01_05995 PF08544 GHMP kinases C terminal J4A01_05995 PF00288 GHMP kinases N terminal domain J4A01_06000 PF02378 Phosphotransferase system, EIIC J4A01_06000 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit J4A01_06005 PF02255 PTS system, Lactose/Cellobiose specific IIA subunit J4A01_06010 PF00232 Glycosyl hydrolase family 1 J4A01_06015 PF00455 DeoR C terminal sensor domain J4A01_06015 PF08220 DeoR-like helix-turn-helix domain J4A01_06035 PF02308 MgtC family J4A01_06045 PF14070 Putative motility protein J4A01_06050 PF10990 Protein of unknown function (DUF2809) J4A01_06055 PF14172 Domain of unknown function (DUF4309) J4A01_06060 PF12838 4Fe-4S dicluster domain J4A01_06060 PF04879 Molybdopterin oxidoreductase Fe4S4 domain J4A01_06060 PF01568 Molydopterin dinucleotide binding domain J4A01_06060 PF10588 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region J4A01_06060 PF00384 Molybdopterin oxidoreductase J4A01_06065 PF07849 Protein of unknown function (DUF1641) J4A01_06070 PF00067 Cytochrome P450 J4A01_06075 PF04101 Glycosyltransferase family 28 C-terminal domain J4A01_06085 PF02602 Uroporphyrinogen-III synthase HemD J4A01_06090 PF03649 Uncharacterised protein family (UPF0014) J4A01_06095 PF00005 ABC transporter J4A01_06100 PF13536 Putative multidrug resistance efflux transporter J4A01_06110 PF07849 Protein of unknown function (DUF1641) J4A01_06115 PF07992 Pyridine nucleotide-disulphide oxidoreductase J4A01_06120 PF02614 Glucuronate isomerase J4A01_06130 PF00356 Bacterial regulatory proteins, lacI family J4A01_06135 PF08125 Mannitol dehydrogenase C-terminal domain J4A01_06135 PF01232 Mannitol dehydrogenase Rossmann domain J4A01_06140 PF08666 SAF domain J4A01_06140 PF04295 D-galactarate dehydratase / Altronate hydrolase, C terminus J4A01_06145 PF00486 Transcriptional regulatory protein, C terminal J4A01_06145 PF00072 Response regulator receiver domain J4A01_06150 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase J4A01_06150 PF00672 HAMP domain J4A01_06150 PF00512 His Kinase A (phospho-acceptor) domain J4A01_06155 PF00005 ABC transporter J4A01_06170 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase J4A01_06170 PF07730 Histidine kinase J4A01_06175 PF00196 Bacterial regulatory proteins, luxR family J4A01_06175 PF00072 Response regulator receiver domain J4A01_06185 PF13575 Domain of unknown function (DUF4135) J4A01_06185 PF05147 Lanthionine synthetase C-like protein J4A01_06190 PF00664 ABC transporter transmembrane region J4A01_06190 PF03412 Peptidase C39 family J4A01_06190 PF00005 ABC transporter J4A01_06205 PF05147 Lanthionine synthetase C-like protein J4A01_06205 PF13575 Domain of unknown function (DUF4135) J4A01_06210 PF01925 Sulfite exporter TauE/SafE J4A01_06215 PF05163 DinB family J4A01_06220 PF18801 response regulator aspartate phosphatase H, N terminal J4A01_06230 PF01471 Putative peptidoglycan binding domain J4A01_06230 PF01476 LysM domain J4A01_06230 PF01510 N-acetylmuramoyl-L-alanine amidase J4A01_06235 PF08000 Bacterial PH domain J4A01_06240 PF05908 Poly-gamma-glutamate hydrolase J4A01_06245 PF06114 IrrE N-terminal-like domain J4A01_06250 PF01381 Helix-turn-helix J4A01_06260 PF01695 IstB-like ATP binding protein J4A01_06275 PF17356 Phage-like element PBSX protein XtrA J4A01_06280 PF08281 Sigma-70, region 4 J4A01_06285 PF03592 Terminase small subunit J4A01_06285 PF10668 Phage terminase small subunit J4A01_06290 PF17288 Terminase RNAseH like domain J4A01_06290 PF04466 Phage terminase large subunit J4A01_06295 PF04860 Phage portal protein J4A01_06300 PF14550 Putative phage serine protease XkdF J4A01_06305 PF05065 Phage capsid family J4A01_06310 PF11436 Protein of unknown function (DUF3199) J4A01_06315 PF12206 Domain of unknown function (DUF3599) J4A01_06320 PF04883 Bacteriophage HK97-gp10, putative tail-component J4A01_06335 PF17482 Phage tail sheath C-terminal domain J4A01_06335 PF17481 Phage tail sheath protein beta-sandwich domain J4A01_06335 PF04984 Phage tail sheath protein subtilisin-like domain J4A01_06340 PF09393 Phage tail tube protein J4A01_06345 PF08890 Phage XkdN-like tail assembly chaperone protein, TAC J4A01_06355 PF01464 Transglycosylase SLT domain J4A01_06355 PF01464 Transglycosylase SLT domain J4A01_06355 PF01464 Transglycosylase SLT domain J4A01_06360 PF01476 LysM domain J4A01_06370 PF10844 Protein of unknown function (DUF2577) J4A01_06375 PF10934 Protein of unknown function (DUF2634) J4A01_06380 PF04865 Baseplate J-like protein J4A01_06385 PF10076 Uncharacterised protein conserved in bacteria (DUF2313) J4A01_06405 PF09693 Phage uncharacterised protein (Phage_XkdX) J4A01_06415 PF10779 Haemolysin XhlA J4A01_06420 PF04688 SPP1 phage holin J4A01_06425 PF01510 N-acetylmuramoyl-L-alanine amidase J4A01_06425 PF01476 LysM domain J4A01_06425 PF01471 Putative peptidoglycan binding domain J4A01_06430 PF14185 Antitoxin SpoIISB, type II toxin-antitoxin system J4A01_06435 PF14171 Toxin SpoIISA, type II toxin-antitoxin system J4A01_06440 PF01384 Phosphate transporter family J4A01_06445 PF01865 Protein of unknown function DUF47 J4A01_06450 PF13520 Amino acid permease J4A01_06455 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily J4A01_06460 PF13231 Dolichyl-phosphate-mannose-protein mannosyltransferase J4A01_06465 PF00535 Glycosyl transferase family 2 J4A01_06475 PF13180 PDZ domain J4A01_06480 PF07690 Major Facilitator Superfamily J4A01_06485 PF04951 D-aminopeptidase J4A01_06490 PF00528 Binding-protein-dependent transport system inner membrane component J4A01_06495 PF00528 Binding-protein-dependent transport system inner membrane component J4A01_06495 PF12911 N-terminal TM domain of oligopeptide transport permease C J4A01_06500 PF08352 Oligopeptide/dipeptide transporter, C-terminal region J4A01_06500 PF00005 ABC transporter J4A01_06505 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle J4A01_06510 PF02016 LD-carboxypeptidase N-terminal domain J4A01_06510 PF17676 LD-carboxypeptidase C-terminal domain J4A01_06515 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain J4A01_06515 PF13378 Enolase C-terminal domain-like J4A01_06520 PF00877 NlpC/P60 family J4A01_06525 PF00005 ABC transporter J4A01_06525 PF08352 Oligopeptide/dipeptide transporter, C-terminal region J4A01_06530 PF10282 Lactonase, 7-bladed beta-propeller J4A01_06540 PF03061 Thioesterase superfamily J4A01_06545 PF13302 Acetyltransferase (GNAT) domain J4A01_06550 PF00893 Small Multidrug Resistance protein J4A01_06555 PF00893 Small Multidrug Resistance protein J4A01_06560 PF01842 ACT domain J4A01_06560 PF00551 Formyl transferase J4A01_06565 PF01472 PUA domain J4A01_06565 PF00696 Amino acid kinase family J4A01_06570 PF00171 Aldehyde dehydrogenase family J4A01_06575 PF02566 OsmC-like protein J4A01_06580 PF01047 MarR family J4A01_06585 PF02566 OsmC-like protein J4A01_06600 PF13181 Tetratricopeptide repeat J4A01_06600 PF00535 Glycosyl transferase family 2 J4A01_06615 PF08267 Cobalamin-independent synthase, N-terminal domain J4A01_06615 PF01717 Cobalamin-independent synthase, Catalytic domain J4A01_06620 PF00082 Subtilase family J4A01_06625 PF01740 STAS domain J4A01_06630 PF02361 Cobalt transport protein J4A01_06635 PF00005 ABC transporter J4A01_06640 PF09819 ABC-type cobalt transport system, permease component J4A01_06645 PF00704 Glycosyl hydrolases family 18 J4A01_06645 PF01476 LysM domain J4A01_06650 PF11132 Transcriptional regulator protein (SplA) J4A01_06655 PF03448 MgtE intracellular N domain J4A01_06655 PF00571 CBS domain J4A01_06655 PF01769 Divalent cation transporter J4A01_06660 PF13411 MerR HTH family regulatory protein J4A01_06675 PF01047 MarR family J4A01_06685 PF01068 ATP dependent DNA ligase domain J4A01_06690 PF02735 Ku70/Ku80 beta-barrel domain J4A01_06695 PF09335 SNARE associated Golgi protein J4A01_06700 PF03741 Integral membrane protein TerC family J4A01_06705 PF04542 Sigma-70 region 2 J4A01_06710 PF12791 Anti-sigma factor N-terminus J4A01_06715 PF00269 Small, acid-soluble spore proteins, alpha/beta type J4A01_06720 PF08876 Domain of unknown function (DUF1836) J4A01_06725 PF01435 Peptidase family M48 J4A01_06730 PF02386 Cation transport protein J4A01_06735 PF04239 Protein of unknown function (DUF421) J4A01_06745 PF01757 Acyltransferase family J4A01_06750 PF13188 PAS domain J4A01_06750 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase J4A01_06750 PF00512 His Kinase A (phospho-acceptor) domain J4A01_06750 PF13426 PAS domain J4A01_06750 PF00989 PAS fold J4A01_06755 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain J4A01_06755 PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain J4A01_06760 PF01008 Initiation factor 2 subunit family J4A01_06765 PF01636 Phosphotransferase enzyme family J4A01_06770 PF00795 Carbon-nitrogen hydrolase J4A01_06775 PF00155 Aminotransferase class I and II J4A01_06780 PF00016 Ribulose bisphosphate carboxylase large chain, catalytic domain J4A01_06780 PF02788 Ribulose bisphosphate carboxylase large chain, N-terminal domain J4A01_06790 PF00596 Class II Aldolase and Adducin N-terminal domain J4A01_06795 PF03079 ARD/ARD' family J4A01_06800 PF09388 Spo0E like sporulation regulatory protein J4A01_06805 PF02743 Cache domain J4A01_06805 PF00512 His Kinase A (phospho-acceptor) domain J4A01_06805 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase J4A01_06810 PF01047 MarR family J4A01_06815 PF13677 Membrane MotB of proton-channel complex MotA/MotB J4A01_06815 PF00691 OmpA family J4A01_06820 PF01618 MotA/TolQ/ExbB proton channel family J4A01_06825 PF10431 C-terminal, D2-small domain, of ClpB protein J4A01_06825 PF07724 AAA domain (Cdc48 subfamily) J4A01_06825 PF00004 ATPase family associated with various cellular activities (AAA) J4A01_06825 PF17871 AAA lid domain J4A01_06840 PF06508 Queuosine biosynthesis protein QueC J4A01_06845 PF01242 6-pyruvoyl tetrahydropterin synthase J4A01_06850 PF04055 Radical SAM superfamily J4A01_06855 PF14489 QueF-like protein J4A01_06865 PF01638 HxlR-like helix-turn-helix J4A01_06880 PF11514 Protein of unknown function (DUF3219) J4A01_06885 PF09953 Uncharacterized protein conserved in bacteria (DUF2187) J4A01_06895 PF07486 Cell Wall Hydrolase J4A01_06900 PF01943 Polysaccharide biosynthesis protein J4A01_06905 PF00578 AhpC/TSA family J4A01_06915 PF01321 Creatinase/Prolidase N-terminal domain J4A01_06915 PF00557 Metallopeptidase family M24 J4A01_06920 PF00356 Bacterial regulatory proteins, lacI family J4A01_06920 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family J4A01_06925 PF00874 PRD domain J4A01_06925 PF03123 CAT RNA binding domain J4A01_06930 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 J4A01_06930 PF00367 phosphotransferase system, EIIB J4A01_06930 PF02378 Phosphotransferase system, EIIC J4A01_06935 PF00381 PTS HPr component phosphorylation site J4A01_06940 PF05524 PEP-utilising enzyme, N-terminal J4A01_06940 PF00391 PEP-utilising enzyme, mobile domain J4A01_06940 PF02896 PEP-utilising enzyme, TIM barrel domain J4A01_06945 PF11132 Transcriptional regulator protein (SplA) J4A01_06955 PF00672 HAMP domain J4A01_06955 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain J4A01_06955 PF02743 Cache domain J4A01_06960 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase J4A01_06960 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase J4A01_06965 PF00188 Cysteine-rich secretory protein family J4A01_06970 PF03717 Penicillin-binding Protein dimerisation domain J4A01_06970 PF00905 Penicillin binding protein transpeptidase domain J4A01_06975 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase J4A01_06975 PF00989 PAS fold J4A01_06975 PF08447 PAS fold J4A01_06975 PF00512 His Kinase A (phospho-acceptor) domain J4A01_06980 PF00155 Aminotransferase class I and II J4A01_06990 PF00072 Response regulator receiver domain J4A01_06990 PF01584 CheW-like domain J4A01_06995 PF14177 YkyB-like protein J4A01_07000 PF07690 Major Facilitator Superfamily J4A01_07005 PF01476 LysM domain J4A01_07005 PF03734 L,D-transpeptidase catalytic domain J4A01_07010 PF00149 Calcineurin-like phosphoesterase J4A01_07010 PF10518 TAT (twin-arginine translocation) pathway signal sequence J4A01_07025 PF00563 EAL domain J4A01_07025 PF10388 EAL-domain associated signalling protein domain J4A01_07030 PF08796 Protein of unknown function (DUF1797) J4A01_07035 PF04308 Ribonuclease H-like J4A01_07040 PF14156 Antirepressor AbbA J4A01_07050 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family J4A01_07050 PF03466 LysR substrate binding domain J4A01_07055 PF00258 Flavodoxin J4A01_07065 PF00258 Flavodoxin J4A01_07070 PF08503 Tetrahydrodipicolinate succinyltransferase N-terminal J4A01_07070 PF00132 Bacterial transferase hexapeptide (six repeats) J4A01_07070 PF14602 Hexapeptide repeat of succinyl-transferase J4A01_07075 PF07687 Peptidase dimerisation domain J4A01_07075 PF01546 Peptidase family M20/M25/M40 J4A01_07080 PF03698 Uncharacterised protein family (UPF0180) J4A01_07085 PF00924 Mechanosensitive ion channel J4A01_07090 PF00578 AhpC/TSA family J4A01_07105 PF12804 MobA-like NTP transferase domain J4A01_07110 PF00899 ThiF family J4A01_07115 PF03454 MoeA C-terminal region (domain IV) J4A01_07115 PF03453 MoeA N-terminal region (domain I and II) J4A01_07115 PF00994 Probable molybdopterin binding domain J4A01_07120 PF03205 Molybdopterin guanine dinucleotide synthesis protein B J4A01_07125 PF02391 MoaE protein J4A01_07130 PF02597 ThiS family J4A01_07135 PF04893 Yip1 domain J4A01_07140 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion J4A01_07145 PF00005 ABC transporter J4A01_07150 PF02687 FtsX-like permease family J4A01_07150 PF12704 MacB-like periplasmic core domain J4A01_07155 PF00455 DeoR C terminal sensor domain J4A01_07155 PF08220 DeoR-like helix-turn-helix domain J4A01_07160 PF00294 pfkB family carbohydrate kinase J4A01_07165 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit J4A01_07165 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 J4A01_07170 PF10502 Signal peptidase, peptidase S26 J4A01_07180 PF00005 ABC transporter J4A01_07180 PF12848 ABC transporter J4A01_07185 PF02558 Ketopantoate reductase PanE/ApbA J4A01_07185 PF08546 Ketopantoate reductase PanE/ApbA C terminal J4A01_07190 PF02073 Thermophilic metalloprotease (M29) J4A01_07195 PF17447 Uncharacterized YkpC-like J4A01_07205 PF04014 Antidote-toxin recognition MazE, bacterial antitoxin J4A01_07205 PF18277 AbrB C-terminal domain J4A01_07210 PF00512 His Kinase A (phospho-acceptor) domain J4A01_07210 PF00989 PAS fold J4A01_07210 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase J4A01_07215 PF06094 Gamma-glutamyl cyclotransferase, AIG2-like J4A01_07220 PF02254 TrkA-N domain J4A01_07220 PF02080 TrkA-C domain J4A01_07225 PF01979 Amidohydrolase family J4A01_07225 PF13382 Adenine deaminase C-terminal domain J4A01_07230 PF07521 Zn-dependent metallo-hydrolase RNA specificity domain J4A01_07230 PF00753 Metallo-beta-lactamase superfamily J4A01_07230 PF17770 Ribonuclease J C-terminal domain J4A01_07235 PF07288 Protein of unknown function (DUF1447) J4A01_07245 PF01327 Polypeptide deformylase J4A01_07255 PF10368 Putative cell-wall binding lipoprotein J4A01_07260 PF00698 Acyl transferase domain J4A01_07260 PF03060 Nitronate monooxygenase J4A01_07265 PF13193 AMP-binding enzyme C-terminal domain J4A01_07265 PF00668 Condensation domain J4A01_07265 PF16197 Ketoacyl-synthetase C-terminal extension J4A01_07265 PF00109 Beta-ketoacyl synthase, N-terminal domain J4A01_07265 PF02801 Beta-ketoacyl synthase, C-terminal domain J4A01_07265 PF08659 KR domain J4A01_07265 PF00550 Phosphopantetheine attachment site J4A01_07265 PF14765 Polyketide synthase dehydratase J4A01_07265 PF00501 AMP-binding enzyme J4A01_07270 PF16197 Ketoacyl-synthetase C-terminal extension J4A01_07270 PF00109 Beta-ketoacyl synthase, N-terminal domain J4A01_07270 PF02801 Beta-ketoacyl synthase, C-terminal domain J4A01_07270 PF08659 KR domain J4A01_07270 PF00550 Phosphopantetheine attachment site J4A01_07270 PF14765 Polyketide synthase dehydratase J4A01_07275 PF00668 Condensation domain J4A01_07275 PF13193 AMP-binding enzyme C-terminal domain J4A01_07275 PF00501 AMP-binding enzyme J4A01_07275 PF00109 Beta-ketoacyl synthase, N-terminal domain J4A01_07275 PF02801 Beta-ketoacyl synthase, C-terminal domain J4A01_07275 PF08659 KR domain J4A01_07275 PF00550 Phosphopantetheine attachment site J4A01_07275 PF14765 Polyketide synthase dehydratase J4A01_07275 PF16197 Ketoacyl-synthetase C-terminal extension J4A01_07280 PF00550 Phosphopantetheine attachment site J4A01_07280 PF16197 Ketoacyl-synthetase C-terminal extension J4A01_07280 PF00109 Beta-ketoacyl synthase, N-terminal domain J4A01_07280 PF14765 Polyketide synthase dehydratase J4A01_07280 PF08659 KR domain J4A01_07280 PF02801 Beta-ketoacyl synthase, C-terminal domain J4A01_07285 PF00109 Beta-ketoacyl synthase, N-terminal domain J4A01_07285 PF02801 Beta-ketoacyl synthase, C-terminal domain J4A01_07285 PF08659 KR domain J4A01_07285 PF00550 Phosphopantetheine attachment site J4A01_07285 PF14765 Polyketide synthase dehydratase J4A01_07285 PF16197 Ketoacyl-synthetase C-terminal extension J4A01_07290 PF14765 Polyketide synthase dehydratase J4A01_07290 PF16197 Ketoacyl-synthetase C-terminal extension J4A01_07290 PF00109 Beta-ketoacyl synthase, N-terminal domain J4A01_07290 PF02801 Beta-ketoacyl synthase, C-terminal domain J4A01_07290 PF08659 KR domain J4A01_07290 PF00550 Phosphopantetheine attachment site J4A01_07295 PF00501 AMP-binding enzyme J4A01_07295 PF00668 Condensation domain J4A01_07295 PF16197 Ketoacyl-synthetase C-terminal extension J4A01_07295 PF00109 Beta-ketoacyl synthase, N-terminal domain J4A01_07295 PF02801 Beta-ketoacyl synthase, C-terminal domain J4A01_07295 PF08659 KR domain J4A01_07295 PF14765 Polyketide synthase dehydratase J4A01_07295 PF13193 AMP-binding enzyme C-terminal domain J4A01_07295 PF00550 Phosphopantetheine attachment site J4A01_07300 PF00144 Beta-lactamase J4A01_07300 PF11954 Domain of unknown function (DUF3471) J4A01_07305 PF00676 Dehydrogenase E1 component J4A01_07310 PF02780 Transketolase, C-terminal domain J4A01_07310 PF02779 Transketolase, pyrimidine binding domain J4A01_07315 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) J4A01_07315 PF00364 Biotin-requiring enzyme J4A01_07315 PF02817 e3 binding domain J4A01_07320 PF07992 Pyridine nucleotide-disulphide oxidoreductase J4A01_07320 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain J4A01_07335 PF13790 SR1 protein J4A01_07340 PF03711 Orn/Lys/Arg decarboxylase, C-terminal domain J4A01_07340 PF01276 Orn/Lys/Arg decarboxylase, major domain J4A01_07345 PF05256 Uncharacterised protein family (UPF0223) J4A01_07350 PF06335 Protein of unknown function (DUF1054) J4A01_07360 PF00459 Inositol monophosphatase family J4A01_07365 PF00583 Acetyltransferase (GNAT) family J4A01_07370 PF03413 Peptidase propeptide and YPEB domain J4A01_07370 PF07504 Fungalysin/Thermolysin Propeptide Motif J4A01_07370 PF01447 Thermolysin metallopeptidase, catalytic domain J4A01_07370 PF02868 Thermolysin metallopeptidase, alpha-helical domain J4A01_07380 PF13490 Putative zinc-finger J4A01_07390 PF17259 Family of unknown function (DUF5325) J4A01_07395 PF03144 Elongation factor Tu domain 2 J4A01_07395 PF00009 Elongation factor Tu GTP binding domain J4A01_07395 PF14492 Elongation Factor G, domain II J4A01_07395 PF00679 Elongation factor G C-terminus J4A01_07400 PF14036 YlaH-like protein J4A01_07405 PF09963 Uncharacterized protein conserved in bacteria (DUF2197) J4A01_07410 PF09580 Sporulation lipoprotein YhcN/YlaJ (Spore_YhcN_YlaJ) J4A01_07415 PF13638 PIN domain J4A01_07415 PF02562 PhoH-like protein J4A01_07425 PF04960 Glutaminase J4A01_07430 PF07408 Protein of unknown function (DUF1507) J4A01_07435 PF01098 Cell cycle protein J4A01_07440 PF02785 Biotin carboxylase C-terminal domain J4A01_07440 PF02436 Conserved carboxylase domain J4A01_07440 PF00289 Biotin carboxylase, N-terminal domain J4A01_07440 PF00364 Biotin-requiring enzyme J4A01_07440 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain J4A01_07440 PF00682 HMGL-like J4A01_07445 PF02628 Cytochrome oxidase assembly protein J4A01_07450 PF01040 UbiA prenyltransferase family J4A01_07455 PF00034 Cytochrome c J4A01_07455 PF02790 Cytochrome C oxidase subunit II, transmembrane domain J4A01_07455 PF00116 Cytochrome C oxidase subunit II, periplasmic domain J4A01_07460 PF00115 Cytochrome C and Quinol oxidase polypeptide I J4A01_07465 PF00510 Cytochrome c oxidase subunit III J4A01_07470 PF03626 Prokaryotic Cytochrome C oxidase subunit IV J4A01_07475 PF09678 Cytochrome c oxidase caa3 assembly factor (Caa3_CtaG) J4A01_07480 PF08868 YugN-like family J4A01_07485 PF00571 CBS domain J4A01_07490 PF00188 Cysteine-rich secretory protein family J4A01_07490 PF14504 CAP-associated N-terminal J4A01_07495 PF14071 Putative coat protein J4A01_07500 PF14003 YlbE-like protein J4A01_07505 PF06133 Control of competence regulator ComK, YlbF/YmcA J4A01_07510 PF09902 Uncharacterized protein conserved in bacteria (DUF2129) J4A01_07520 PF01467 Cytidylyltransferase-like J4A01_07525 PF07670 Nucleoside recognition J4A01_07530 PF01734 Patatin-like phospholipase J4A01_07535 PF13180 PDZ domain J4A01_07535 PF05362 Lon protease (S16) C-terminal proteolytic domain J4A01_07540 PF05636 HIGH Nucleotidyl Transferase J4A01_07545 PF02620 Large ribosomal RNA subunit accumulation protein YceD J4A01_07550 PF01783 Ribosomal L32p protein family J4A01_07560 PF00583 Acetyltransferase (GNAT) family J4A01_07565 PF02558 Ketopantoate reductase PanE/ApbA J4A01_07565 PF08546 Ketopantoate reductase PanE/ApbA C terminal J4A01_07570 PF10079 Bacillithiol biosynthesis BshC J4A01_07575 PF02381 MraZ protein, putative antitoxin-like J4A01_07580 PF01795 MraW methylase family J4A01_07590 PF03793 PASTA domain J4A01_07590 PF03717 Penicillin-binding Protein dimerisation domain J4A01_07590 PF00905 Penicillin binding protein transpeptidase domain J4A01_07595 PF03793 PASTA domain J4A01_07595 PF03717 Penicillin-binding Protein dimerisation domain J4A01_07595 PF00905 Penicillin binding protein transpeptidase domain J4A01_07600 PF01225 Mur ligase family, catalytic domain J4A01_07600 PF02875 Mur ligase family, glutamate ligase domain J4A01_07600 PF08245 Mur ligase middle domain J4A01_07605 PF00953 Glycosyl transferase family 4 J4A01_07605 PF10555 Phospho-N-acetylmuramoyl-pentapeptide-transferase signature 1 J4A01_07610 PF08245 Mur ligase middle domain J4A01_07610 PF02875 Mur ligase family, glutamate ligase domain J4A01_07615 PF01098 Cell cycle protein J4A01_07620 PF04101 Glycosyltransferase family 28 C-terminal domain J4A01_07620 PF03033 Glycosyltransferase family 28 N-terminal domain J4A01_07625 PF01565 FAD binding domain J4A01_07625 PF02873 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain J4A01_07630 PF08478 POTRA domain, FtsQ-type J4A01_07635 PF02491 SHS2 domain inserted in FTSA J4A01_07640 PF12327 FtsZ family, C-terminal domain J4A01_07640 PF00091 Tubulin/FtsZ family, GTPase domain J4A01_07645 PF00082 Subtilase family J4A01_07645 PF05922 Peptidase inhibitor I9 J4A01_07650 PF03419 Sporulation factor SpoIIGA J4A01_07655 PF04545 Sigma-70, region 4 J4A01_07655 PF04542 Sigma-70 region 2 J4A01_07660 PF04545 Sigma-70, region 4 J4A01_07660 PF04539 Sigma-70 region 3 J4A01_07660 PF04542 Sigma-70 region 2 J4A01_07665 PF00005 ABC transporter J4A01_07670 PF01546 Peptidase family M20/M25/M40 J4A01_07670 PF07687 Peptidase dimerisation domain J4A01_07675 PF05239 PRC-barrel domain J4A01_07680 PF02578 Multi-copper polyphenol oxidoreductase laccase J4A01_07685 PF01168 Alanine racemase, N-terminal domain J4A01_07690 PF04472 Cell division protein SepF J4A01_07695 PF02325 YGGT family J4A01_07700 PF01479 S4 domain J4A01_07700 PF17774 Putative RNA-binding domain in YlmH J4A01_07705 PF05103 DivIVA protein J4A01_07710 PF00133 tRNA synthetases class I (I, L, M and V) J4A01_07710 PF08264 Anticodon-binding domain of tRNA J4A01_07715 PF01258 Prokaryotic dksA/traR C4-type zinc finger J4A01_07720 PF01252 Signal peptidase (SPase) II J4A01_07725 PF00849 RNA pseudouridylate synthase J4A01_07725 PF01479 S4 domain J4A01_07730 PF00156 Phosphoribosyl transferase domain J4A01_07735 PF00860 Permease family J4A01_07740 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain J4A01_07740 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain J4A01_07745 PF01979 Amidohydrolase family J4A01_07750 PF00988 Carbamoyl-phosphate synthase small chain, CPSase domain J4A01_07750 PF00117 Glutamine amidotransferase class-I J4A01_07755 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain J4A01_07755 PF02787 Carbamoyl-phosphate synthetase large chain, oligomerisation domain J4A01_07755 PF02142 MGS-like domain J4A01_07760 PF10418 Iron-sulfur cluster binding domain of dihydroorotate dehydrogenase B J4A01_07760 PF00175 Oxidoreductase NAD-binding domain J4A01_07765 PF01180 Dihydroorotate dehydrogenase J4A01_07770 PF00215 Orotidine 5'-phosphate decarboxylase / HUMPS family J4A01_07775 PF00156 Phosphoribosyl transferase domain J4A01_07780 PF01507 Phosphoadenosine phosphosulfate reductase family J4A01_07785 PF01384 Phosphate transporter family J4A01_07790 PF01747 ATP-sulfurylase J4A01_07790 PF14306 PUA-like domain J4A01_07800 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases J4A01_07805 PF01903 CbiX J4A01_07815 PF05670 NFACT protein RNA binding domain J4A01_07820 PF00690 Cation transporter/ATPase, N-terminus J4A01_07820 PF00689 Cation transporting ATPase, C-terminus J4A01_07825 PF08340 Domain of unknown function (DUF1732) J4A01_07825 PF03755 YicC-like family, N-terminal region J4A01_07830 PF04025 Domain of unknown function (DUF370) J4A01_07835 PF00625 Guanylate kinase J4A01_07840 PF01192 RNA polymerase Rpb6 J4A01_07845 PF04127 DNA / pantothenate metabolism flavoprotein J4A01_07845 PF02441 Flavoprotein J4A01_07850 PF04851 Type III restriction enzyme, res subunit J4A01_07850 PF18074 Primosomal protein N C-terminal domain J4A01_07850 PF00271 Helicase conserved C-terminal domain J4A01_07850 PF17764 3′ DNA-binding domain (3′BD) J4A01_07850 PF18319 PriA DNA helicase Cys-rich region (CRR) domain J4A01_07855 PF01327 Polypeptide deformylase J4A01_07860 PF02911 Formyl transferase, C-terminal domain J4A01_07860 PF00551 Formyl transferase J4A01_07865 PF01189 16S rRNA methyltransferase RsmB/F J4A01_07865 PF01029 NusB family J4A01_07870 PF04055 Radical SAM superfamily J4A01_07880 PF03793 PASTA domain J4A01_07880 PF00069 Protein kinase domain J4A01_07885 PF16745 RsgA N-terminal domain J4A01_07885 PF03193 RsgA GTPase J4A01_07890 PF00834 Ribulose-phosphate 3 epimerase family J4A01_07895 PF04265 Thiamin pyrophosphokinase, vitamin B1 binding domain J4A01_07895 PF04263 Thiamin pyrophosphokinase, catalytic domain J4A01_07900 PF08183 Stage V sporulation protein family J4A01_07905 PF00830 Ribosomal L28 family J4A01_07910 PF03780 Asp23 family, cell envelope-related function J4A01_07915 PF13684 Dihydroxyacetone kinase family J4A01_07915 PF02734 DAK2 domain J4A01_07920 PF01842 ACT domain J4A01_07920 PF03315 Serine dehydratase beta chain J4A01_07925 PF03313 Serine dehydratase alpha chain J4A01_07930 PF00270 DEAD/DEAH box helicase J4A01_07930 PF00271 Helicase conserved C-terminal domain J4A01_07930 PF17191 RecG wedge domain J4A01_07935 PF03061 Thioesterase superfamily J4A01_07940 PF02504 Fatty acid synthesis protein J4A01_07945 PF00698 Acyl transferase domain J4A01_07955 PF00550 Phosphopantetheine attachment site J4A01_07960 PF00035 Double-stranded RNA binding motif J4A01_07960 PF14622 Ribonuclease-III-like J4A01_07965 PF06470 SMC proteins Flexible Hinge Domain J4A01_07965 PF02463 RecF/RecN/SMC N terminal domain J4A01_07970 PF00448 SRP54-type protein, GTPase domain J4A01_07970 PF02881 SRP54-type protein, helical bundle domain J4A01_07980 PF04297 Putative helix-turn-helix protein, YlxM / p13 like J4A01_07985 PF00448 SRP54-type protein, GTPase domain J4A01_07985 PF02881 SRP54-type protein, helical bundle domain J4A01_07985 PF02978 Signal peptide binding domain J4A01_07990 PF00886 Ribosomal protein S16 J4A01_08000 PF11068 YlqD protein J4A01_08005 PF05239 PRC-barrel domain J4A01_08005 PF01782 RimM N-terminal domain J4A01_08010 PF01746 tRNA (Guanine-1)-methyltransferase J4A01_08015 PF01245 Ribosomal protein L19 J4A01_08020 PF01926 50S ribosome-binding GTPase J4A01_08025 PF01351 Ribonuclease HII J4A01_08035 PF01312 FlhB HrpN YscU SpaS Family J4A01_08040 PF08442 ATP-grasp domain J4A01_08040 PF00549 CoA-ligase J4A01_08045 PF00549 CoA-ligase J4A01_08045 PF02629 CoA binding domain J4A01_08050 PF02481 DNA recombination-mediator protein A J4A01_08055 PF01751 Toprim domain J4A01_08055 PF01396 Topoisomerase DNA binding C4 zinc finger J4A01_08055 PF01131 DNA topoisomerase J4A01_08060 PF01134 Glucose inhibited division protein A J4A01_08065 PF02899 Phage integrase, N-terminal SAM-like domain J4A01_08065 PF00589 Phage integrase family J4A01_08070 PF00227 Proteasome subunit J4A01_08075 PF07724 AAA domain (Cdc48 subfamily) J4A01_08075 PF00004 ATPase family associated with various cellular activities (AAA) J4A01_08075 PF10431 C-terminal, D2-small domain, of ClpB protein J4A01_08080 PF06018 CodY GAF-like domain J4A01_08080 PF08222 CodY helix-turn-helix domain J4A01_08085 PF00460 Flagella basal body rod protein J4A01_08090 PF00460 Flagella basal body rod protein J4A01_08090 PF06429 Flagellar basal body rod FlgEFG protein C-terminal J4A01_08095 PF02049 Flagellar hook-basal body complex protein FliE J4A01_08100 PF01514 Secretory protein of YscJ/FliF family J4A01_08100 PF08345 Flagellar M-ring protein C-terminal J4A01_08105 PF14842 FliG N-terminal domain J4A01_08105 PF01706 FliG C-terminal domain J4A01_08105 PF14841 FliG middle domain J4A01_08110 PF02108 Flagellar assembly protein FliH J4A01_08115 PF02874 ATP synthase alpha/beta family, beta-barrel domain J4A01_08115 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain J4A01_08115 PF18269 T3SS EscN ATPase C-terminal domain J4A01_08120 PF02050 Flagellar FliJ protein J4A01_08125 PF03448 MgtE intracellular N domain J4A01_08130 PF02120 Flagellar hook-length control protein FliK J4A01_08135 PF03963 Flagellar hook capping protein - N-terminal region J4A01_08140 PF00460 Flagella basal body rod protein J4A01_08140 PF06429 Flagellar basal body rod FlgEFG protein C-terminal J4A01_08145 PF06289 Flagellar and Swarming motility proteins J4A01_08150 PF03748 Flagellar basal body-associated protein FliL J4A01_08155 PF02154 Flagellar motor switch protein FliM J4A01_08155 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term J4A01_08160 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term J4A01_08160 PF04509 CheC-like family J4A01_08165 PF00072 Response regulator receiver domain J4A01_08170 PF04347 Flagellar biosynthesis protein, FliO J4A01_08175 PF00813 FliP family J4A01_08180 PF01313 Bacterial export proteins, family 3 J4A01_08185 PF01311 Bacterial export proteins, family 1 J4A01_08190 PF01312 FlhB HrpN YscU SpaS Family J4A01_08195 PF00771 FHIPEP family J4A01_08200 PF00448 SRP54-type protein, GTPase domain J4A01_08205 PF10609 NUBPL iron-transfer P-loop NTPase J4A01_08210 PF01339 CheB methylesterase J4A01_08210 PF00072 Response regulator receiver domain J4A01_08215 PF01584 CheW-like domain J4A01_08215 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase J4A01_08215 PF02895 Signal transducing histidine kinase, homodimeric domain J4A01_08215 PF07194 P2 response regulator binding domain J4A01_08215 PF01627 Hpt domain J4A01_08220 PF01584 CheW-like domain J4A01_08225 PF04509 CheC-like family J4A01_08230 PF03975 CheD chemotactic sensory transduction J4A01_08235 PF04539 Sigma-70 region 3 J4A01_08235 PF04545 Sigma-70, region 4 J4A01_08235 PF04542 Sigma-70 region 2 J4A01_08245 PF00318 Ribosomal protein S2 J4A01_08250 PF00889 Elongation factor TS J4A01_08255 PF00696 Amino acid kinase family J4A01_08260 PF01765 Ribosome recycling factor J4A01_08265 PF01255 Putative undecaprenyl diphosphate synthase J4A01_08275 PF13288 DXP reductoisomerase C-terminal domain J4A01_08275 PF08436 1-deoxy-D-xylulose 5-phosphate reductoisomerase C-terminal domain J4A01_08275 PF02670 1-deoxy-D-xylulose 5-phosphate reductoisomerase J4A01_08280 PF17820 PDZ domain J4A01_08280 PF02163 Peptidase family M50 J4A01_08285 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) J4A01_08285 PF04073 Aminoacyl-tRNA editing domain J4A01_08285 PF03129 Anticodon binding domain J4A01_08290 PF14579 Helix-hairpin-helix motif J4A01_08290 PF00929 Exonuclease J4A01_08290 PF02811 PHP domain J4A01_08290 PF17657 Bacterial DNA polymerase III alpha subunit finger domain J4A01_08290 PF14480 DNA polymerase III polC-type N-terminus I J4A01_08290 PF11490 DNA polymerase III polC-type N-terminus II J4A01_08290 PF07733 Bacterial DNA polymerase III alpha NTPase domain J4A01_08295 PF02576 RimP N-terminal domain J4A01_08295 PF17384 RimP C-terminal SH3 domain J4A01_08300 PF00575 S1 RNA binding domain J4A01_08300 PF13184 NusA-like KH domain J4A01_08300 PF08529 NusA N-terminal domain J4A01_08305 PF04296 Protein of unknown function (DUF448) J4A01_08310 PF01248 Ribosomal protein L7Ae/L30e/S12e/Gadd45 family J4A01_08315 PF11987 Translation-initiation factor 2 J4A01_08315 PF00009 Elongation factor Tu GTP binding domain J4A01_08315 PF04760 Translation initiation factor IF-2, N-terminal region J4A01_08320 PF04456 Protein of unknown function (DUF503) J4A01_08325 PF02033 Ribosome-binding factor A J4A01_08330 PF16198 tRNA pseudouridylate synthase B C-terminal domain J4A01_08330 PF01509 TruB family pseudouridylate synthase (N terminal domain) J4A01_08335 PF06574 FAD synthetase J4A01_08335 PF01687 Riboflavin kinase J4A01_08340 PF00312 Ribosomal protein S15 J4A01_08345 PF00013 KH domain J4A01_08345 PF03726 Polyribonucleotide nucleotidyltransferase, RNA binding domain J4A01_08345 PF01138 3' exoribonuclease family, domain 1 J4A01_08345 PF03725 3' exoribonuclease family, domain 2 J4A01_08345 PF00575 S1 RNA binding domain J4A01_08350 PF01522 Polysaccharide deacetylase J4A01_08355 PF05193 Peptidase M16 inactive domain J4A01_08355 PF00675 Insulinase (Peptidase family M16) J4A01_08360 PF05239 PRC-barrel domain J4A01_08365 PF01262 Alanine dehydrogenase/PNT, C-terminal domain J4A01_08365 PF16924 Dipicolinate synthase subunit A N-terminal domain J4A01_08370 PF02441 Flavoprotein J4A01_08375 PF01118 Semialdehyde dehydrogenase, NAD binding domain J4A01_08375 PF02774 Semialdehyde dehydrogenase, dimerisation domain J4A01_08380 PF00696 Amino acid kinase family J4A01_08380 PF13840 ACT domain J4A01_08385 PF00701 Dihydrodipicolinate synthetase family J4A01_08390 PF17770 Ribonuclease J C-terminal domain J4A01_08390 PF00753 Metallo-beta-lactamase superfamily J4A01_08390 PF07521 Zn-dependent metallo-hydrolase RNA specificity domain J4A01_08395 PF00574 Clp protease J4A01_08400 PF14035 YlzJ-like protein J4A01_08405 PF01580 FtsK/SpoIIIE family J4A01_08405 PF09397 Ftsk gamma domain J4A01_08405 PF17854 FtsK alpha domain J4A01_08410 PF07702 UTRA domain J4A01_08410 PF00392 Bacterial regulatory proteins, gntR family J4A01_08415 PF07690 Major Facilitator Superfamily J4A01_08420 PF01047 MarR family J4A01_08425 PF03176 MMPL family J4A01_08430 PF05193 Peptidase M16 inactive domain J4A01_08435 PF00675 Insulinase (Peptidase family M16) J4A01_08435 PF05193 Peptidase M16 inactive domain J4A01_08445 PF11588 Protein of unknown function (DUF3243) J4A01_08450 PF11868 Protein of unknown function (DUF3388) J4A01_08455 PF13464 Domain of unknown function (DUF4115) J4A01_08460 PF01066 CDP-alcohol phosphatidyltransferase J4A01_08465 PF00994 Probable molybdopterin binding domain J4A01_08465 PF18146 Damage-inducible protein CinA KH domain J4A01_08465 PF02464 Competence-damaged protein J4A01_08470 PF00154 recA bacterial DNA recombination protein J4A01_08475 PF00144 Beta-lactamase J4A01_08480 PF00013 KH domain J4A01_08480 PF12072 Domain of unknown function (DUF3552) J4A01_08480 PF01966 HD domain J4A01_08485 PF13277 YmdB-like protein J4A01_08490 PF04232 Stage V sporulation protein S (SpoVS) J4A01_08495 PF08240 Alcohol dehydrogenase GroES-like domain J4A01_08495 PF00107 Zinc-binding dehydrogenase J4A01_08500 PF00155 Aminotransferase class I and II J4A01_08505 PF04055 Radical SAM superfamily J4A01_08505 PF01938 TRAM domain J4A01_08505 PF00919 Uncharacterized protein family UPF0004 J4A01_08510 PF06133 Control of competence regulator ComK, YlbF/YmcA J4A01_08515 PF10628 Outer spore coat protein E (CotE) J4A01_08520 PF00488 MutS domain V J4A01_08520 PF05190 MutS family domain IV J4A01_08520 PF05192 MutS domain III J4A01_08520 PF05188 MutS domain II J4A01_08520 PF01624 MutS domain I J4A01_08525 PF01119 DNA mismatch repair protein, C-terminal domain J4A01_08525 PF08676 MutL C terminal dimerisation domain J4A01_08535 PF00753 Metallo-beta-lactamase superfamily J4A01_08540 PF00698 Acyl transferase domain J4A01_08545 PF00698 Acyl transferase domain J4A01_08550 PF00698 Acyl transferase domain J4A01_08555 PF00550 Phosphopantetheine attachment site J4A01_08560 PF08540 Hydroxymethylglutaryl-coenzyme A synthase C terminal J4A01_08560 PF01154 Hydroxymethylglutaryl-coenzyme A synthase N terminal J4A01_08565 PF00378 Enoyl-CoA hydratase/isomerase J4A01_08570 PF00378 Enoyl-CoA hydratase/isomerase J4A01_08575 PF02801 Beta-ketoacyl synthase, C-terminal domain J4A01_08575 PF00501 AMP-binding enzyme J4A01_08575 PF13193 AMP-binding enzyme C-terminal domain J4A01_08575 PF00668 Condensation domain J4A01_08575 PF16197 Ketoacyl-synthetase C-terminal extension J4A01_08575 PF00109 Beta-ketoacyl synthase, N-terminal domain J4A01_08575 PF08659 KR domain J4A01_08575 PF00550 Phosphopantetheine attachment site J4A01_08575 PF14765 Polyketide synthase dehydratase J4A01_08580 PF14765 Polyketide synthase dehydratase J4A01_08580 PF00550 Phosphopantetheine attachment site J4A01_08580 PF02801 Beta-ketoacyl synthase, C-terminal domain J4A01_08580 PF16197 Ketoacyl-synthetase C-terminal extension J4A01_08580 PF00109 Beta-ketoacyl synthase, N-terminal domain J4A01_08580 PF08659 KR domain J4A01_08585 PF02801 Beta-ketoacyl synthase, C-terminal domain J4A01_08585 PF08659 KR domain J4A01_08585 PF08242 Methyltransferase domain J4A01_08585 PF00550 Phosphopantetheine attachment site J4A01_08585 PF14765 Polyketide synthase dehydratase J4A01_08585 PF16197 Ketoacyl-synthetase C-terminal extension J4A01_08585 PF00550 Phosphopantetheine attachment site J4A01_08585 PF00109 Beta-ketoacyl synthase, N-terminal domain J4A01_08585 PF02801 Beta-ketoacyl synthase, C-terminal domain J4A01_08585 PF14765 Polyketide synthase dehydratase J4A01_08585 PF16197 Ketoacyl-synthetase C-terminal extension J4A01_08585 PF00109 Beta-ketoacyl synthase, N-terminal domain J4A01_08585 PF08242 Methyltransferase domain J4A01_08585 PF08659 KR domain J4A01_08590 PF14765 Polyketide synthase dehydratase J4A01_08590 PF00550 Phosphopantetheine attachment site J4A01_08590 PF08659 KR domain J4A01_08590 PF02801 Beta-ketoacyl synthase, C-terminal domain J4A01_08590 PF00109 Beta-ketoacyl synthase, N-terminal domain J4A01_08590 PF16197 Ketoacyl-synthetase C-terminal extension J4A01_08590 PF00668 Condensation domain J4A01_08590 PF13193 AMP-binding enzyme C-terminal domain J4A01_08590 PF00501 AMP-binding enzyme J4A01_08595 PF00109 Beta-ketoacyl synthase, N-terminal domain J4A01_08595 PF00550 Phosphopantetheine attachment site J4A01_08595 PF08242 Methyltransferase domain J4A01_08595 PF02801 Beta-ketoacyl synthase, C-terminal domain J4A01_08595 PF16197 Ketoacyl-synthetase C-terminal extension J4A01_08595 PF14765 Polyketide synthase dehydratase J4A01_08595 PF00975 Thioesterase domain J4A01_08600 PF00067 Cytochrome P450 J4A01_08605 PF14040 Deoxyribonuclease NucA/NucB J4A01_08610 PF06912 Protein of unknown function (DUF1275) J4A01_08620 PF00082 Subtilase family J4A01_08630 PF05908 Poly-gamma-glutamate hydrolase J4A01_08635 PF02566 OsmC-like protein J4A01_08640 PF00893 Small Multidrug Resistance protein J4A01_08645 PF00893 Small Multidrug Resistance protein J4A01_08655 PF12788 YmaF family J4A01_08665 PF17209 Hfq protein J4A01_08670 PF14157 YmzC-like protein J4A01_08680 PF07972 NrdI Flavodoxin like J4A01_08685 PF02867 Ribonucleotide reductase, barrel domain J4A01_08685 PF00317 Ribonucleotide reductase, all-alpha domain J4A01_08685 PF08343 Ribonucleotide reductase N-terminal J4A01_08690 PF00268 Ribonucleotide reductase, small chain J4A01_08700 PF05036 Sporulation related domain J4A01_08700 PF01520 N-acetylmuramoyl-L-alanine amidase J4A01_08705 PF17866 AAA lid domain J4A01_08705 PF00004 ATPase family associated with various cellular activities (AAA) J4A01_08710 PF13167 GTP-binding GTPase N-terminal J4A01_08710 PF16360 GTP-binding GTPase Middle Region J4A01_08710 PF01926 50S ribosome-binding GTPase J4A01_08715 PF06838 Methionine gamma-lyase J4A01_08720 PF13411 MerR HTH family regulatory protein J4A01_08725 PF00120 Glutamine synthetase, catalytic domain J4A01_08725 PF03951 Glutamine synthetase, beta-Grasp domain J4A01_08750 PF10823 Protein of unknown function (DUF2568) J4A01_08770 PF17851 Beta xylosidase C-terminal Concanavalin A-like domain J4A01_08770 PF04616 Glycosyl hydrolases family 43 J4A01_08775 PF00480 ROK family J4A01_08780 PF01261 Xylose isomerase-like TIM barrel J4A01_08785 PF02782 FGGY family of carbohydrate kinases, C-terminal domain J4A01_08785 PF00370 FGGY family of carbohydrate kinases, N-terminal domain J4A01_08790 PF00391 PEP-utilising enzyme, mobile domain J4A01_08790 PF01326 Pyruvate phosphate dikinase, PEP/pyruvate binding domain J4A01_08815 PF00107 Zinc-binding dehydrogenase J4A01_08815 PF08240 Alcohol dehydrogenase GroES-like domain J4A01_08820 PF00101 Ribulose bisphosphate carboxylase, small chain J4A01_08820 PF00132 Bacterial transferase hexapeptide (six repeats) J4A01_08835 PF17094 Uncharacterised protein family (UPF0715) J4A01_08860 PF03067 Lytic polysaccharide mono-oxygenase, cellulose-degrading J4A01_08860 PF18416 N-acetylglucosamine binding protein domain 2 J4A01_08865 PF09680 Family of unknown function J4A01_08880 PF11962 Peptidase_G2, IMC autoproteolytic cleavage domain J4A01_08880 PF12708 Pectate lyase superfamily protein J4A01_08885 PF00692 dUTPase J4A01_08890 PF05908 Poly-gamma-glutamate hydrolase J4A01_08905 PF10710 Protein of unknown function (DUF2512) J4A01_08915 PF01726 LexA DNA binding domain J4A01_08915 PF00717 Peptidase S24-like J4A01_08920 PF01476 LysM domain J4A01_08925 PF00239 Resolvase, N terminal domain J4A01_08930 PF05979 Bacterial protein of unknown function (DUF896) J4A01_08935 PF00456 Transketolase, thiamine diphosphate binding domain J4A01_08935 PF02780 Transketolase, C-terminal domain J4A01_08935 PF02779 Transketolase, pyrimidine binding domain J4A01_08940 PF10747 Sporulation inhibitor of replication protein SirA J4A01_08945 PF03672 Uncharacterised protein family (UPF0154) J4A01_08950 PF09388 Spo0E like sporulation regulatory protein J4A01_08955 PF02683 Cytochrome C biogenesis protein transmembrane region J4A01_08960 PF00072 Response regulator receiver domain J4A01_08965 PF07301 Protein of unknown function (DUF1453) J4A01_08970 PF11084 Protein of unknown function (DUF2621) J4A01_08980 PF08179 Small acid-soluble spore protein P family J4A01_08990 PF00330 Aconitase family (aconitate hydratase) J4A01_08990 PF00694 Aconitase C-terminal domain J4A01_08995 PF00578 AhpC/TSA family J4A01_09000 PF13040 Fur-regulated basic protein B J4A01_09005 PF08177 Small acid-soluble spore protein N family J4A01_09015 PF03061 Thioesterase superfamily J4A01_09025 PF01521 Iron-sulphur cluster biosynthesis J4A01_09030 PF02660 Glycerol-3-phosphate acyltransferase J4A01_09035 PF13380 CoA binding domain J4A01_09040 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase J4A01_09040 PF00986 DNA gyrase B subunit, carboxyl terminus J4A01_09040 PF01751 Toprim domain J4A01_09040 PF00204 DNA gyrase B J4A01_09045 PF03989 DNA gyrase C-terminal domain, beta-propeller J4A01_09045 PF00521 DNA gyrase/topoisomerase IV, subunit A J4A01_09055 PF01235 Sodium:alanine symporter family J4A01_09060 PF00294 pfkB family carbohydrate kinase J4A01_09065 PF08240 Alcohol dehydrogenase GroES-like domain J4A01_09065 PF00107 Zinc-binding dehydrogenase J4A01_09070 PF01081 KDPG and KHG aldolase J4A01_09075 PF03786 D-mannonate dehydratase (UxuA) J4A01_09080 PF00106 short chain dehydrogenase J4A01_09085 PF00356 Bacterial regulatory proteins, lacI family J4A01_09090 PF07690 Major Facilitator Superfamily J4A01_09100 PF13761 Domain of unknown function (DUF4166) J4A01_09105 PF14158 YndJ-like protein J4A01_09125 PF00942 Cellulose binding domain J4A01_09125 PF00150 Cellulase (glycosyl hydrolase family 5) J4A01_09135 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase J4A01_09135 PF00512 His Kinase A (phospho-acceptor) domain J4A01_09140 PF00072 Response regulator receiver domain J4A01_09140 PF00486 Transcriptional regulatory protein, C terminal J4A01_09145 PF02055 Glycosyl hydrolase family 30 TIM-barrel domain J4A01_09145 PF17189 Glycosyl hydrolase family 30 beta sandwich domain J4A01_09150 PF03422 Carbohydrate binding module (family 6) J4A01_09150 PF04616 Glycosyl hydrolases family 43 J4A01_09155 PF00550 Phosphopantetheine attachment site J4A01_09155 PF00975 Thioesterase domain J4A01_09155 PF13193 AMP-binding enzyme C-terminal domain J4A01_09155 PF00501 AMP-binding enzyme J4A01_09155 PF00668 Condensation domain J4A01_09160 PF00501 AMP-binding enzyme J4A01_09160 PF13193 AMP-binding enzyme C-terminal domain J4A01_09160 PF00668 Condensation domain J4A01_09160 PF00550 Phosphopantetheine attachment site J4A01_09165 PF02801 Beta-ketoacyl synthase, C-terminal domain J4A01_09165 PF00550 Phosphopantetheine attachment site J4A01_09165 PF00109 Beta-ketoacyl synthase, N-terminal domain J4A01_09165 PF00202 Aminotransferase class-III J4A01_09165 PF00668 Condensation domain J4A01_09165 PF13193 AMP-binding enzyme C-terminal domain J4A01_09165 PF00501 AMP-binding enzyme J4A01_09165 PF16197 Ketoacyl-synthetase C-terminal extension J4A01_09170 PF00698 Acyl transferase domain J4A01_09180 PF01144 Coenzyme A transferase J4A01_09185 PF01144 Coenzyme A transferase J4A01_09195 PF00067 Cytochrome P450 J4A01_09200 PF06968 Biotin and Thiamin Synthesis associated domain J4A01_09200 PF04055 Radical SAM superfamily J4A01_09210 PF00155 Aminotransferase class I and II J4A01_09215 PF00202 Aminotransferase class-III J4A01_09220 PF03744 6-carboxyhexanoate--CoA ligase J4A01_09225 PF04138 GtrA-like protein J4A01_09235 PF09335 SNARE associated Golgi protein J4A01_09240 PF01039 Carboxyl transferase domain J4A01_09245 PF00378 Enoyl-CoA hydratase/isomerase J4A01_09250 PF00682 HMGL-like J4A01_09255 PF00364 Biotin-requiring enzyme J4A01_09260 PF02785 Biotin carboxylase C-terminal domain J4A01_09260 PF00289 Biotin carboxylase, N-terminal domain J4A01_09260 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain J4A01_09265 PF00501 AMP-binding enzyme J4A01_09265 PF13193 AMP-binding enzyme C-terminal domain J4A01_09270 PF00441 Acyl-CoA dehydrogenase, C-terminal domain J4A01_09270 PF02770 Acyl-CoA dehydrogenase, middle domain J4A01_09270 PF02771 Acyl-CoA dehydrogenase, N-terminal domain J4A01_09275 PF02638 Glycosyl hydrolase-like 10 J4A01_09280 PF07098 Protein of unknown function (DUF1360) J4A01_09285 PF13193 AMP-binding enzyme C-terminal domain J4A01_09285 PF00668 Condensation domain J4A01_09285 PF00550 Phosphopantetheine attachment site J4A01_09285 PF00975 Thioesterase domain J4A01_09285 PF00501 AMP-binding enzyme J4A01_09290 PF00550 Phosphopantetheine attachment site J4A01_09290 PF00501 AMP-binding enzyme J4A01_09290 PF13193 AMP-binding enzyme C-terminal domain J4A01_09290 PF00668 Condensation domain J4A01_09295 PF00550 Phosphopantetheine attachment site J4A01_09295 PF00501 AMP-binding enzyme J4A01_09295 PF13193 AMP-binding enzyme C-terminal domain J4A01_09295 PF00668 Condensation domain J4A01_09300 PF00501 AMP-binding enzyme J4A01_09300 PF13193 AMP-binding enzyme C-terminal domain J4A01_09300 PF00668 Condensation domain J4A01_09300 PF00550 Phosphopantetheine attachment site J4A01_09305 PF00501 AMP-binding enzyme J4A01_09305 PF13193 AMP-binding enzyme C-terminal domain J4A01_09305 PF00668 Condensation domain J4A01_09305 PF00550 Phosphopantetheine attachment site J4A01_09310 PF02113 D-Ala-D-Ala carboxypeptidase 3 (S13) family J4A01_09315 PF01263 Aldose 1-epimerase J4A01_09320 PF01554 MatE J4A01_09325 PF16800 IseA DL-endopeptidase inhibitor J4A01_09335 PF00589 Phage integrase family J4A01_09340 PF12728 Helix-turn-helix domain J4A01_09350 PF07690 Major Facilitator Superfamily J4A01_09360 PF03129 Anticodon binding domain J4A01_09360 PF02824 TGS domain J4A01_09360 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) J4A01_09360 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain J4A01_09365 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family J4A01_09365 PF03466 LysR substrate binding domain J4A01_09370 PF00107 Zinc-binding dehydrogenase J4A01_09370 PF08240 Alcohol dehydrogenase GroES-like domain J4A01_09375 PF07992 Pyridine nucleotide-disulphide oxidoreductase J4A01_09375 PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster J4A01_09380 PF00310 Glutamine amidotransferases class-II J4A01_09380 PF04898 Glutamate synthase central domain J4A01_09380 PF01645 Conserved region in glutamate synthase J4A01_09380 PF01493 GXGXG motif J4A01_09385 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family J4A01_09385 PF03466 LysR substrate binding domain J4A01_09390 PF00696 Amino acid kinase family J4A01_09390 PF01472 PUA domain J4A01_09395 PF03807 NADP oxidoreductase coenzyme F420-dependent J4A01_09395 PF14748 Pyrroline-5-carboxylate reductase dimerisation J4A01_09400 PF02334 Replication terminator protein J4A01_09405 PF00106 short chain dehydrogenase J4A01_09410 PF06103 Bacterial protein of unknown function (DUF948) J4A01_09420 PF07690 Major Facilitator Superfamily J4A01_09425 PF02782 FGGY family of carbohydrate kinases, C-terminal domain J4A01_09425 PF00370 FGGY family of carbohydrate kinases, N-terminal domain J4A01_09430 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain J4A01_09430 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain J4A01_09435 PF04879 Molybdopterin oxidoreductase Fe4S4 domain J4A01_09435 PF00384 Molybdopterin oxidoreductase J4A01_09435 PF01568 Molydopterin dinucleotide binding domain J4A01_09465 PF04740 LXG domain of WXG superfamily J4A01_09465 PF14411 A nuclease of the HNH/ENDO VII superfamily with conserved LHH J4A01_09470 PF01588 Putative tRNA binding domain J4A01_09475 PF07883 Cupin domain J4A01_09475 PF12833 Helix-turn-helix domain J4A01_09480 PF13305 Tetracyclin repressor-like, C-terminal domain J4A01_09480 PF00440 Bacterial regulatory proteins, tetR family J4A01_09485 PF00753 Metallo-beta-lactamase superfamily J4A01_09495 PF01022 Bacterial regulatory protein, arsR family J4A01_09505 PF04238 Protein of unknown function (DUF420) J4A01_09510 PF18846 Bacterial archaeo-eukaryotic release factor family 5 J4A01_09520 PF02016 LD-carboxypeptidase N-terminal domain J4A01_09520 PF17676 LD-carboxypeptidase C-terminal domain J4A01_09530 PF06725 3D domain J4A01_09530 PF01476 LysM domain J4A01_09535 PF00270 DEAD/DEAH box helicase J4A01_09535 PF00271 Helicase conserved C-terminal domain J4A01_09535 PF16124 RecQ zinc-binding J4A01_09535 PF09382 RQC domain J4A01_09535 PF00570 HRDC domain J4A01_09545 PF02525 Flavodoxin-like fold J4A01_09550 PF01258 Prokaryotic dksA/traR C4-type zinc finger J4A01_09565 PF00011 Hsp20/alpha crystallin family J4A01_09580 PF08000 Bacterial PH domain J4A01_09595 PF00171 Aldehyde dehydrogenase family J4A01_09600 PF13249 Squalene-hopene cyclase N-terminal domain J4A01_09600 PF13243 Squalene-hopene cyclase C-terminal domain J4A01_09605 PF02777 Iron/manganese superoxide dismutases, C-terminal domain J4A01_09605 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain J4A01_09610 PF00209 Sodium:neurotransmitter symporter family J4A01_09615 PF01758 Sodium Bile acid symporter family J4A01_09620 PF00753 Metallo-beta-lactamase superfamily J4A01_09625 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) J4A01_09625 PF00364 Biotin-requiring enzyme J4A01_09625 PF02817 e3 binding domain J4A01_09630 PF00676 Dehydrogenase E1 component J4A01_09630 PF16870 2-oxoglutarate dehydrogenase C-terminal J4A01_09630 PF02779 Transketolase, pyrimidine binding domain J4A01_09635 PF00092 von Willebrand factor type A domain J4A01_09640 PF07728 AAA domain (dynein-related subfamily) J4A01_09645 PF13627 Prokaryotic lipoprotein-attachment site J4A01_09645 PF00080 Copper/zinc superoxide dismutase (SODC) J4A01_09650 PF01476 LysM domain J4A01_09650 PF00877 NlpC/P60 family J4A01_09655 PF00201 UDP-glucoronosyl and UDP-glucosyl transferase J4A01_09660 PF02457 DisA bacterial checkpoint controller nucleotide-binding J4A01_09660 PF10372 Bacterial membrane-spanning protein N-terminus J4A01_09665 PF01554 MatE J4A01_09670 PF01740 STAS domain J4A01_09675 PF02585 GlcNAc-PI de-N-acetylase J4A01_09680 PF08830 Protein of unknown function (DUF1806) J4A01_09690 PF00892 EamA-like transporter family J4A01_09705 PF14552 Tautomerase enzyme J4A01_09715 PF01638 HxlR-like helix-turn-helix J4A01_09720 PF00881 Nitroreductase family J4A01_09725 PF01738 Dienelactone hydrolase family J4A01_09730 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily J4A01_09735 PF11755 Protein of unknown function (DUF3311) J4A01_09740 PF00474 Sodium:solute symporter family J4A01_09750 PF00232 Glycosyl hydrolase family 1 J4A01_09755 PF00392 Bacterial regulatory proteins, gntR family J4A01_09755 PF07702 UTRA domain J4A01_09760 PF17820 PDZ domain J4A01_09760 PF03572 Peptidase family S41 J4A01_09760 PF01471 Putative peptidoglycan binding domain J4A01_09765 PF08241 Methyltransferase domain J4A01_09775 PF02557 D-alanyl-D-alanine carboxypeptidase J4A01_09780 PF01048 Phosphorylase superfamily J4A01_09790 PF14191 YodL-like J4A01_09795 PF01569 PAP2 superfamily J4A01_09800 PF14162 YozD-like protein J4A01_09815 PF06855 YozE SAM-like fold J4A01_09820 PF14122 YokU-like protein, putative antitoxin J4A01_09825 PF12544 Lysine-2,3-aminomutase J4A01_09830 PF00583 Acetyltransferase (GNAT) family J4A01_09835 PF07687 Peptidase dimerisation domain J4A01_09835 PF01546 Peptidase family M20/M25/M40 J4A01_09840 PF01144 Coenzyme A transferase J4A01_09845 PF01144 Coenzyme A transferase J4A01_09850 PF00202 Aminotransferase class-III J4A01_09855 PF06445 GyrI-like small molecule binding domain J4A01_09865 PF00583 Acetyltransferase (GNAT) family J4A01_09870 PF00535 Glycosyl transferase family 2 J4A01_09885 PF12996 DUF based on E. rectale Gene description (DUF3880) J4A01_09890 PF02333 Phytase J4A01_09895 PF08485 Polysaccharide biosynthesis protein C-terminal J4A01_09895 PF02719 Polysaccharide biosynthesis protein J4A01_09910 PF11518 Protein of unknown function (DUF3221) J4A01_09920 PF14037 YoqO-like protein J4A01_09930 PF18801 response regulator aspartate phosphatase H, N terminal J4A01_09960 PF14411 A nuclease of the HNH/ENDO VII superfamily with conserved LHH J4A01_09960 PF04740 LXG domain of WXG superfamily J4A01_09970 PF05901 Excalibur calcium-binding domain J4A01_09970 PF00565 Staphylococcal nuclease homologue J4A01_09975 PF00239 Resolvase, N terminal domain J4A01_09975 PF07508 Recombinase J4A01_09980 PF02719 Polysaccharide biosynthesis protein J4A01_09985 PF01641 SelR domain J4A01_09990 PF01625 Peptide methionine sulfoxide reductase J4A01_09995 PF01047 MarR family J4A01_10000 PF09911 Uncharacterized protein conserved in bacteria (DUF2140) J4A01_10005 PF13472 GDSL-like Lipase/Acylhydrolase family J4A01_10010 PF02630 SCO1/SenC J4A01_10015 PF10751 Protein of unknown function (DUF2535) J4A01_10020 PF00291 Pyridoxal-phosphate dependent enzyme J4A01_10020 PF00585 C-terminal regulatory domain of Threonine dehydratase J4A01_10025 PF08461 Ribonuclease R winged-helix domain J4A01_10025 PF00158 Sigma-54 interaction domain J4A01_10030 PF03006 Haemolysin-III related J4A01_10040 PF00186 Dihydrofolate reductase J4A01_10045 PF00303 Thymidylate synthase J4A01_10050 PF14005 YpjP-like protein J4A01_10055 PF04445 Putative SAM-dependent methyltransferase J4A01_10060 PF06491 Disulphide isomerase J4A01_10065 PF00920 Dehydratase family J4A01_10070 PF08712 Scaffold protein Nfu/NifU N terminal J4A01_10070 PF13769 Virulence factor J4A01_10075 PF01966 HD domain J4A01_10080 PF00255 Glutathione peroxidase J4A01_10085 PF04204 Homoserine O-succinyltransferase J4A01_10090 PF00534 Glycosyl transferases group 1 J4A01_10090 PF06925 Monogalactosyldiacylglycerol (MGDG) synthase J4A01_10100 PF00313 'Cold-shock' DNA-binding domain J4A01_10110 PF10819 Protein of unknown function (DUF2564) J4A01_10115 PF10782 Zinc-finger J4A01_10120 PF13456 Reverse transcriptase-like J4A01_10125 PF02592 Putative vitamin uptake transporter J4A01_10130 PF13456 Reverse transcriptase-like J4A01_10140 PF01367 5'-3' exonuclease, C-terminal SAM fold J4A01_10140 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain J4A01_10150 PF10752 Protein of unknown function (DUF2533) J4A01_10155 PF00350 Dynamin family J4A01_10165 PF04140 Isoprenylcysteine carboxyl methyltransferase (ICMT) family J4A01_10170 PF02797 Chalcone and stilbene synthases, C-terminal domain J4A01_10170 PF00195 Chalcone and stilbene synthases, N-terminal domain J4A01_10190 PF00857 Isochorismatase family J4A01_10200 PF00860 Permease family J4A01_10205 PF00156 Phosphoribosyl transferase domain J4A01_10210 PF02074 Carboxypeptidase Taq (M32) metallopeptidase J4A01_10215 PF13307 Helicase C-terminal domain J4A01_10225 PF14139 YpzG-like protein J4A01_10230 PF02926 THUMP domain J4A01_10230 PF01170 Putative RNA methylase family UPF0020 J4A01_10240 PF05103 DivIVA protein J4A01_10245 PF06908 YspA SLOG family J4A01_10250 PF11122 Inner spore coat protein D J4A01_10260 PF13482 RNase_H superfamily J4A01_10265 PF00270 DEAD/DEAH box helicase J4A01_10265 PF00271 Helicase conserved C-terminal domain J4A01_10265 PF09369 Domain of unknown function (DUF1998) J4A01_10270 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 J4A01_10280 PF14179 YppG-like protein J4A01_10285 PF14178 YppF-like protein J4A01_10290 PF08807 Bacterial domain of unknown function (DUF1798) J4A01_10295 PF17522 Family of unknown function (DUF5446) J4A01_10305 PF10720 Protein of unknown function (DUF2515) J4A01_10310 PF03838 Recombination protein U J4A01_10315 PF00912 Transglycosylase J4A01_10315 PF00905 Penicillin binding protein transpeptidase domain J4A01_10325 PF10576 Iron-sulfur binding domain of endonuclease III J4A01_10325 PF00633 Helix-hairpin-helix motif J4A01_10325 PF00730 HhH-GPD superfamily base excision DNA repair protein J4A01_10330 PF07261 Replication initiation and membrane attachment J4A01_10335 PF00152 tRNA synthetases class II (D, K and N) J4A01_10335 PF01336 OB-fold nucleic acid binding domain J4A01_10340 PF00155 Aminotransferase class I and II J4A01_10345 PF03413 Peptidase propeptide and YPEB domain J4A01_10345 PF17881 Domain of unknown function (DUF5590) J4A01_10350 PF14084 Protein of unknown function (DUF4264) J4A01_10355 PF13307 Helicase C-terminal domain J4A01_10355 PF04851 Type III restriction enzyme, res subunit J4A01_10355 PF00929 Exonuclease J4A01_10360 PF02261 Aspartate decarboxylase J4A01_10365 PF02569 Pantoate-beta-alanine ligase J4A01_10370 PF02548 Ketopantoate hydroxymethyltransferase J4A01_10375 PF02237 Biotin protein ligase C terminal domain J4A01_10375 PF03099 Biotin/lipoate A/B protein ligase family J4A01_10375 PF08279 HTH domain J4A01_10380 PF13735 tRNA nucleotidyltransferase domain 2 putative J4A01_10380 PF12627 Probable RNA and SrmB- binding site of polymerase A J4A01_10380 PF01743 Poly A polymerase head domain J4A01_10385 PF13439 Glycosyltransferase Family 4 J4A01_10385 PF00534 Glycosyl transferases group 1 J4A01_10390 PF02585 GlcNAc-PI de-N-acetylase J4A01_10395 PF02142 MGS-like domain J4A01_10400 PF05173 Dihydrodipicolinate reductase, C-terminus J4A01_10400 PF01113 Dihydrodipicolinate reductase, N-terminus J4A01_10405 PF03819 MazG nucleotide pyrophosphohydrolase domain J4A01_10410 PF10035 Uncharacterized protein conserved in bacteria (DUF2179) J4A01_10410 PF02588 Uncharacterised 5xTM membrane BCR, YitT family COG1284 J4A01_10420 PF09577 Sporulation protein YpjB (SpoYpjB) J4A01_10425 PF07187 Protein of unknown function (DUF1405) J4A01_10430 PF13442 Cytochrome C oxidase, cbb3-type, subunit III J4A01_10430 PF00032 Cytochrome b(C-terminal)/b6/petD J4A01_10435 PF00033 Cytochrome b/b6/petB J4A01_10440 PF00355 Rieske [2Fe-2S] domain J4A01_10445 PF10673 Protein of unknown function (DUF2487) J4A01_10450 PF08858 IDEAL domain J4A01_10450 PF08864 UPF0302 domain J4A01_10460 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) J4A01_10465 PF01842 ACT domain J4A01_10465 PF02153 Prephenate dehydrogenase J4A01_10470 PF00155 Aminotransferase class I and II J4A01_10475 PF00290 Tryptophan synthase alpha chain J4A01_10480 PF00291 Pyridoxal-phosphate dependent enzyme J4A01_10485 PF00697 N-(5'phosphoribosyl)anthranilate (PRA) isomerase J4A01_10490 PF00218 Indole-3-glycerol phosphate synthase J4A01_10495 PF02885 Glycosyl transferase family, helical bundle domain J4A01_10495 PF00591 Glycosyl transferase family, a/b domain J4A01_10500 PF04715 Anthranilate synthase component I, N terminal region J4A01_10500 PF00425 chorismate binding enzyme J4A01_10505 PF07736 Chorismate mutase type I J4A01_10510 PF01761 3-dehydroquinate synthase J4A01_10515 PF01264 Chorismate synthase J4A01_10520 PF01739 CheR methyltransferase, SAM binding domain J4A01_10520 PF03705 CheR methyltransferase, all-alpha domain J4A01_10525 PF00334 Nucleoside diphosphate kinase J4A01_10530 PF00348 Polyprenyl synthetase J4A01_10535 PF01209 ubiE/COQ5 methyltransferase family J4A01_10540 PF07307 Heptaprenyl diphosphate synthase (HEPPP synthase) subunit 1 J4A01_10545 PF02081 Tryptophan RNA-binding attenuator protein J4A01_10550 PF01227 GTP cyclohydrolase I J4A01_10555 PF00216 Bacterial DNA-binding protein J4A01_10560 PF09547 Stage IV sporulation protein A (spore_IV_A) J4A01_10570 PF10966 Protein of unknown function (DUF2768) J4A01_10575 PF07479 NAD-dependent glycerol-3-phosphate dehydrogenase C-terminus J4A01_10575 PF01210 NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus J4A01_10580 PF14714 KH-domain-like of EngA bacterial GTPase enzymes, C-terminal J4A01_10580 PF01926 50S ribosome-binding GTPase J4A01_10590 PF14140 YpzI-like protein J4A01_10595 PF01070 FMN-dependent dehydrogenase J4A01_10600 PF00575 S1 RNA binding domain J4A01_10605 PF02224 Cytidylate kinase J4A01_10610 PF17313 Family of unknown function (DUF5359) J4A01_10615 PF07238 PilZ domain J4A01_10615 PF12945 Flagellar protein YcgR J4A01_10620 PF03413 Peptidase propeptide and YPEB domain J4A01_10620 PF14620 YpeB sporulation J4A01_10625 PF07486 Cell Wall Hydrolase J4A01_10625 PF01471 Putative peptidoglycan binding domain J4A01_10630 PF13367 PrsW family intramembrane metalloprotease J4A01_10640 PF00208 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase J4A01_10640 PF02812 Glu/Leu/Phe/Val dehydrogenase, dimerisation domain J4A01_10645 PF05389 Negative regulator of genetic competence (MecA) J4A01_10650 PF00149 Calcineurin-like phosphoesterase J4A01_10655 PF10864 Protein of unknown function (DUF2663) J4A01_10660 PF01476 LysM domain J4A01_10665 PF02517 CPBP intramembrane metalloprotease J4A01_10670 PF00270 DEAD/DEAH box helicase J4A01_10670 PF00271 Helicase conserved C-terminal domain J4A01_10675 PF14493 Helix-turn-helix domain J4A01_10685 PF12822 ECF transporter, substrate-specific component J4A01_10690 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain J4A01_10690 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain J4A01_10690 PF01842 ACT domain J4A01_10700 PF08281 Sigma-70, region 4 J4A01_10700 PF04542 Sigma-70 region 2 J4A01_10705 PF00672 HAMP domain J4A01_10705 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase J4A01_10705 PF18698 Histidine kinase sensor domain J4A01_10705 PF00512 His Kinase A (phospho-acceptor) domain J4A01_10705 PF00989 PAS fold J4A01_10710 PF00072 Response regulator receiver domain J4A01_10710 PF00486 Transcriptional regulatory protein, C terminal J4A01_10715 PF01578 Cytochrome C assembly protein J4A01_10720 PF05140 ResB-like family J4A01_10725 PF00578 AhpC/TSA family J4A01_10730 PF00849 RNA pseudouridylate synthase J4A01_10730 PF01479 S4 domain J4A01_10735 PF07670 Nucleoside recognition J4A01_10740 PF07670 Nucleoside recognition J4A01_10745 PF07943 Penicillin-binding protein 5, C-terminal domain J4A01_10745 PF00768 D-alanyl-D-alanine carboxypeptidase J4A01_10750 PF13047 Protein of unknown function (DUF3907) J4A01_10755 PF04079 Segregation and condensation complex subunit ScpB J4A01_10760 PF02616 Segregation and condensation protein ScpA J4A01_10770 PF03745 Domain of unknown function (DUF309) J4A01_10775 PF00583 Acetyltransferase (GNAT) family J4A01_10780 PF00885 6,7-dimethyl-8-ribityllumazine synthase J4A01_10785 PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase J4A01_10785 PF00925 GTP cyclohydrolase II J4A01_10790 PF00677 Lumazine binding domain J4A01_10795 PF01872 RibD C-terminal domain J4A01_10795 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region J4A01_10805 PF10502 Signal peptidase, peptidase S26 J4A01_10815 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD J4A01_10820 PF06207 Protein of unknown function (DUF1002) J4A01_10825 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain J4A01_10825 PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain J4A01_10830 PF03323 Bacillus/Clostridium GerA spore germination protein J4A01_10835 PF14097 Stage V sporulation protein AE1 J4A01_10840 PF03862 SpoVAC/SpoVAEB sporulation membrane protein J4A01_10845 PF07451 Stage V sporulation protein AD (SpoVAD) J4A01_10850 PF03862 SpoVAC/SpoVAEB sporulation membrane protein J4A01_10860 PF12164 Stage V sporulation protein AA J4A01_10865 PF04542 Sigma-70 region 2 J4A01_10865 PF04539 Sigma-70 region 3 J4A01_10865 PF04545 Sigma-70, region 4 J4A01_10870 PF13581 Histidine kinase-like ATPase domain J4A01_10875 PF01740 STAS domain J4A01_10880 PF00768 D-alanyl-D-alanine carboxypeptidase J4A01_10880 PF07943 Penicillin-binding protein 5, C-terminal domain J4A01_10885 PF01048 Phosphorylase superfamily J4A01_10890 PF01676 Metalloenzyme superfamily J4A01_10895 PF02899 Phage integrase, N-terminal SAM-like domain J4A01_10895 PF00589 Phage integrase family J4A01_10900 PF14004 Protein of unknown function (DUF4227) J4A01_10905 PF01475 Ferric uptake regulator family J4A01_10910 PF01944 Stage II sporulation protein M J4A01_10925 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain J4A01_10925 PF00390 Malic enzyme, N-terminal domain J4A01_10925 PF03949 Malic enzyme, NAD binding domain J4A01_10930 PF03553 Na+/H+ antiporter family J4A01_10935 PF10415 Fumarase C C-terminus J4A01_10935 PF00206 Lyase J4A01_10940 PF00710 Asparaginase, N-terminal J4A01_10940 PF17763 Glutaminase/Asparaginase C-terminal domain J4A01_10945 PF01381 Helix-turn-helix J4A01_10955 PF00293 NUDIX domain J4A01_10960 PF13072 Mother cell inhibitor of FtsZ J4A01_10965 PF00248 Aldo/keto reductase family J4A01_10975 PF12146 Serine aminopeptidase, S33 J4A01_10980 PF10827 Protein of unknown function (DUF2552) J4A01_10985 PF01521 Iron-sulphur cluster biosynthesis J4A01_10990 PF13673 Acetyltransferase (GNAT) domain J4A01_10990 PF04229 GrpB protein J4A01_10995 PF03992 Antibiotic biosynthesis monooxygenase J4A01_11000 PF00583 Acetyltransferase (GNAT) family J4A01_11005 PF11799 impB/mucB/samB family C-terminal domain J4A01_11005 PF00817 impB/mucB/samB family J4A01_11010 PF08863 YolD-like protein J4A01_11015 PF14164 YqzH-like protein J4A01_11020 PF01594 AI-2E family transporter J4A01_11035 PF00485 Phosphoribulokinase / Uridine kinase family J4A01_11040 PF00291 Pyridoxal-phosphate dependent enzyme J4A01_11045 PF00106 short chain dehydrogenase J4A01_11050 PF00753 Metallo-beta-lactamase superfamily J4A01_11055 PF14748 Pyrroline-5-carboxylate reductase dimerisation J4A01_11055 PF03807 NADP oxidoreductase coenzyme F420-dependent J4A01_11060 PF00378 Enoyl-CoA hydratase/isomerase J4A01_11065 PF08540 Hydroxymethylglutaryl-coenzyme A synthase C terminal J4A01_11065 PF01154 Hydroxymethylglutaryl-coenzyme A synthase N terminal J4A01_11070 PF00067 Cytochrome P450 J4A01_11075 PF16197 Ketoacyl-synthetase C-terminal extension J4A01_11075 PF00109 Beta-ketoacyl synthase, N-terminal domain J4A01_11075 PF02801 Beta-ketoacyl synthase, C-terminal domain J4A01_11075 PF08659 KR domain J4A01_11075 PF08242 Methyltransferase domain J4A01_11075 PF00550 Phosphopantetheine attachment site J4A01_11075 PF14765 Polyketide synthase dehydratase J4A01_11080 PF14765 Polyketide synthase dehydratase J4A01_11080 PF08242 Methyltransferase domain J4A01_11080 PF08659 KR domain J4A01_11080 PF02801 Beta-ketoacyl synthase, C-terminal domain J4A01_11080 PF00550 Phosphopantetheine attachment site J4A01_11080 PF00109 Beta-ketoacyl synthase, N-terminal domain J4A01_11080 PF16197 Ketoacyl-synthetase C-terminal extension J4A01_11085 PF00668 Condensation domain J4A01_11085 PF13193 AMP-binding enzyme C-terminal domain J4A01_11085 PF00109 Beta-ketoacyl synthase, N-terminal domain J4A01_11085 PF02801 Beta-ketoacyl synthase, C-terminal domain J4A01_11085 PF08659 KR domain J4A01_11085 PF00550 Phosphopantetheine attachment site J4A01_11085 PF14765 Polyketide synthase dehydratase J4A01_11085 PF16197 Ketoacyl-synthetase C-terminal extension J4A01_11085 PF00501 AMP-binding enzyme J4A01_11090 PF00550 Phosphopantetheine attachment site J4A01_11090 PF08659 KR domain J4A01_11090 PF00501 AMP-binding enzyme J4A01_11090 PF13193 AMP-binding enzyme C-terminal domain J4A01_11090 PF00668 Condensation domain J4A01_11090 PF16197 Ketoacyl-synthetase C-terminal extension J4A01_11090 PF00109 Beta-ketoacyl synthase, N-terminal domain J4A01_11090 PF02801 Beta-ketoacyl synthase, C-terminal domain J4A01_11090 PF14765 Polyketide synthase dehydratase J4A01_11095 PF00109 Beta-ketoacyl synthase, N-terminal domain J4A01_11095 PF02801 Beta-ketoacyl synthase, C-terminal domain J4A01_11095 PF08242 Methyltransferase domain J4A01_11095 PF00550 Phosphopantetheine attachment site J4A01_11095 PF14765 Polyketide synthase dehydratase J4A01_11095 PF16197 Ketoacyl-synthetase C-terminal extension J4A01_11095 PF08659 KR domain J4A01_11100 PF00550 Phosphopantetheine attachment site J4A01_11100 PF08659 KR domain J4A01_11100 PF14765 Polyketide synthase dehydratase J4A01_11100 PF00501 AMP-binding enzyme J4A01_11100 PF13193 AMP-binding enzyme C-terminal domain J4A01_11100 PF00668 Condensation domain J4A01_11100 PF16197 Ketoacyl-synthetase C-terminal extension J4A01_11100 PF00109 Beta-ketoacyl synthase, N-terminal domain J4A01_11100 PF02801 Beta-ketoacyl synthase, C-terminal domain J4A01_11105 PF02801 Beta-ketoacyl synthase, C-terminal domain J4A01_11105 PF08659 KR domain J4A01_11105 PF08242 Methyltransferase domain J4A01_11105 PF00109 Beta-ketoacyl synthase, N-terminal domain J4A01_11105 PF14765 Polyketide synthase dehydratase J4A01_11105 PF16197 Ketoacyl-synthetase C-terminal extension J4A01_11105 PF00550 Phosphopantetheine attachment site J4A01_11115 PF13193 AMP-binding enzyme C-terminal domain J4A01_11115 PF00501 AMP-binding enzyme J4A01_11130 PF00698 Acyl transferase domain J4A01_11130 PF03060 Nitronate monooxygenase J4A01_11135 PF00467 KOW motif J4A01_11135 PF02357 Transcription termination factor nusG J4A01_11140 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family J4A01_11140 PF03466 LysR substrate binding domain J4A01_11150 PF00724 NADH:flavin oxidoreductase / NADH oxidase family J4A01_11155 PF12146 Serine aminopeptidase, S33 J4A01_11160 PF00471 Ribosomal protein L33 J4A01_11165 PF12706 Beta-lactamase superfamily domain J4A01_11170 PF02781 Glucose-6-phosphate dehydrogenase, C-terminal domain J4A01_11170 PF00479 Glucose-6-phosphate dehydrogenase, NAD binding domain J4A01_11175 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase J4A01_11175 PF00393 6-phosphogluconate dehydrogenase, C-terminal domain J4A01_11180 PF11798 IMS family HHH motif J4A01_11180 PF11799 impB/mucB/samB family C-terminal domain J4A01_11180 PF00817 impB/mucB/samB family J4A01_11190 PF02096 60Kd inner membrane protein J4A01_11195 PF01546 Peptidase family M20/M25/M40 J4A01_11195 PF07687 Peptidase dimerisation domain J4A01_11200 PF01039 Carboxyl transferase domain J4A01_11220 PF06081 Aromatic acid exporter family member 1 J4A01_11220 PF11728 Putative aromatic acid exporter C-terminal domain J4A01_11225 PF00005 ABC transporter J4A01_11230 PF00528 Binding-protein-dependent transport system inner membrane component J4A01_11235 PF00497 Bacterial extracellular solute-binding proteins, family 3 J4A01_11240 PF06491 Disulphide isomerase J4A01_11245 PF00781 Diacylglycerol kinase catalytic domain J4A01_11250 PF02817 e3 binding domain J4A01_11250 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) J4A01_11250 PF00364 Biotin-requiring enzyme J4A01_11255 PF02780 Transketolase, C-terminal domain J4A01_11255 PF02779 Transketolase, pyrimidine binding domain J4A01_11260 PF00676 Dehydrogenase E1 component J4A01_11265 PF07992 Pyridine nucleotide-disulphide oxidoreductase J4A01_11265 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain J4A01_11270 PF00871 Acetokinase family J4A01_11275 PF00208 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase J4A01_11275 PF02812 Glu/Leu/Phe/Val dehydrogenase, dimerisation domain J4A01_11280 PF01515 Phosphate acetyl/butaryl transferase J4A01_11285 PF02954 Bacterial regulatory protein, Fis family J4A01_11285 PF00989 PAS fold J4A01_11285 PF00158 Sigma-54 interaction domain J4A01_11290 PF11118 Protein of unknown function (DUF2627) J4A01_11300 PF03972 MmgE/PrpD family J4A01_11305 PF00285 Citrate synthase, C-terminal domain J4A01_11310 PF02770 Acyl-CoA dehydrogenase, middle domain J4A01_11310 PF02771 Acyl-CoA dehydrogenase, N-terminal domain J4A01_11310 PF00441 Acyl-CoA dehydrogenase, C-terminal domain J4A01_11315 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain J4A01_11315 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain J4A01_11320 PF02803 Thiolase, C-terminal domain J4A01_11320 PF00108 Thiolase, N-terminal domain J4A01_11325 PF03009 Glycerophosphoryl diester phosphodiesterase family J4A01_11330 PF01520 N-acetylmuramoyl-L-alanine amidase J4A01_11355 PF00724 NADH:flavin oxidoreductase / NADH oxidase family J4A01_11360 PF10676 Spore germination protein gerPA/gerPF J4A01_11365 PF10676 Spore germination protein gerPA/gerPF J4A01_11370 PF01168 Alanine racemase, N-terminal domain J4A01_11370 PF00842 Alanine racemase, C-terminal domain J4A01_11375 PF08769 Sporulation initiation factor Spo0A C terminal J4A01_11375 PF00072 Response regulator receiver domain J4A01_11380 PF17820 PDZ domain J4A01_11380 PF05580 SpoIVB peptidase S55 J4A01_11385 PF13476 AAA domain J4A01_11390 PF01316 Arginine repressor, DNA binding domain J4A01_11390 PF02863 Arginine repressor, C-terminal domain J4A01_11395 PF01728 FtsJ-like methyltransferase J4A01_11395 PF01479 S4 domain J4A01_11400 PF13292 1-deoxy-D-xylulose-5-phosphate synthase J4A01_11400 PF02779 Transketolase, pyrimidine binding domain J4A01_11400 PF02780 Transketolase, C-terminal domain J4A01_11405 PF00348 Polyprenyl synthetase J4A01_11410 PF02609 Exonuclease VII small subunit J4A01_11415 PF02601 Exonuclease VII, large subunit J4A01_11415 PF13742 OB-fold nucleic acid binding domain J4A01_11420 PF00763 Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain J4A01_11420 PF02882 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain J4A01_11425 PF01029 NusB family J4A01_11430 PF03780 Asp23 family, cell envelope-related function J4A01_11435 PF02785 Biotin carboxylase C-terminal domain J4A01_11435 PF00289 Biotin carboxylase, N-terminal domain J4A01_11435 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain J4A01_11440 PF00364 Biotin-requiring enzyme J4A01_11445 PF12685 SpoIIIAH-like protein J4A01_11455 PF09581 Stage III sporulation protein AF (Spore_III_AF) J4A01_11460 PF09546 Stage III sporulation protein AE (spore_III_AE) J4A01_11465 PF06686 Stage III sporulation protein AC/AD protein family J4A01_11470 PF06686 Stage III sporulation protein AC/AD protein family J4A01_11475 PF09548 Stage III sporulation protein AB (spore_III_AB) J4A01_11485 PF10942 Protein of unknown function (DUF2619) J4A01_11490 PF01132 Elongation factor P (EF-P) OB domain J4A01_11490 PF08207 Elongation factor P (EF-P) KOW-like domain J4A01_11490 PF09285 Elongation factor P, C-terminal J4A01_11495 PF01321 Creatinase/Prolidase N-terminal domain J4A01_11495 PF00557 Metallopeptidase family M24 J4A01_11500 PF11085 Conserved membrane protein YqhR J4A01_11505 PF07136 Protein of unknown function (DUF1385) J4A01_11515 PF01734 Patatin-like phospholipase J4A01_11520 PF02742 Iron dependent repressor, metal binding and dimerisation domain J4A01_11520 PF01325 Iron dependent repressor, N-terminal DNA binding domain J4A01_11525 PF03099 Biotin/lipoate A/B protein ligase family J4A01_11530 PF00581 Rhodanese-like domain J4A01_11535 PF02347 Glycine cleavage system P-protein J4A01_11540 PF02347 Glycine cleavage system P-protein J4A01_11545 PF08669 Glycine cleavage T-protein C-terminal barrel domain J4A01_11545 PF01571 Aminomethyltransferase folate-binding domain J4A01_11550 PF00176 SNF2 family N-terminal domain J4A01_11550 PF00271 Helicase conserved C-terminal domain J4A01_11555 PF11079 Bacterial protein YqhG of unknown function J4A01_11560 PF08671 Anti-repressor SinI J4A01_11565 PF08671 Anti-repressor SinI J4A01_11565 PF01381 Helix-turn-helix J4A01_11570 PF12389 Camelysin metallo-endopeptidase J4A01_11585 PF13028 Protein of unknown function (DUF3889) J4A01_11590 PF14038 YqzE-like protein J4A01_11595 PF14173 ComG operon protein 7 J4A01_11600 PF15980 Putative Competence protein ComGF J4A01_11610 PF07963 Prokaryotic N-terminal methylation motif J4A01_11615 PF07963 Prokaryotic N-terminal methylation motif J4A01_11620 PF00482 Type II secretion system (T2SS), protein F J4A01_11625 PF00437 Type II/IV secretion system protein J4A01_11630 PF01544 CorA-like Mg2+ transporter protein J4A01_11635 PF03471 Transporter associated domain J4A01_11635 PF01595 Cyclin M transmembrane N-terminal domain J4A01_11635 PF00571 CBS domain J4A01_11640 PF01740 STAS domain J4A01_11640 PF14361 RsbT co-antagonist protein rsbRD N-terminal domain J4A01_11650 PF03960 ArsC family J4A01_11655 PF11117 Protein of unknown function (DUF2626) J4A01_11660 PF00753 Metallo-beta-lactamase superfamily J4A01_11665 PF10958 Protein of unknown function (DUF2759) J4A01_11670 PF01910 Thiamine-binding protein J4A01_11680 PF00246 Zinc carboxypeptidase J4A01_11685 PF00480 ROK family J4A01_11690 PF06014 Bacterial protein of unknown function (DUF910) J4A01_11695 PF03553 Na+/H+ antiporter family J4A01_11705 PF01812 5-formyltetrahydrofolate cyclo-ligase family J4A01_11710 PF00471 Ribosomal protein L33 J4A01_11725 PF00005 ABC transporter J4A01_11730 PF00005 ABC transporter J4A01_11735 PF00528 Binding-protein-dependent transport system inner membrane component J4A01_11740 PF00528 Binding-protein-dependent transport system inner membrane component J4A01_11745 PF12849 PBP superfamily domain J4A01_11750 PF03717 Penicillin-binding Protein dimerisation domain J4A01_11750 PF00905 Penicillin binding protein transpeptidase domain J4A01_11755 PF07690 Major Facilitator Superfamily J4A01_11760 PF02777 Iron/manganese superoxide dismutases, C-terminal domain J4A01_11760 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain J4A01_11765 PF04306 Protein of unknown function (DUF456) J4A01_11770 PF06691 Protein of unknown function (DUF1189) J4A01_11780 PF04551 GcpE protein J4A01_11795 PF01475 Ferric uptake regulator family J4A01_11800 PF10035 Uncharacterized protein conserved in bacteria (DUF2179) J4A01_11800 PF02588 Uncharacterised 5xTM membrane BCR, YitT family COG1284 J4A01_11805 PF11116 Protein of unknown function (DUF2624) J4A01_11810 PF01261 Xylose isomerase-like TIM barrel J4A01_11815 PF00270 DEAD/DEAH box helicase J4A01_11815 PF00271 Helicase conserved C-terminal domain J4A01_11820 PF14181 YqfQ-like protein J4A01_11825 PF02401 LytB protein J4A01_11830 PF01784 NIF3 (NGG1p interacting factor 3) J4A01_11835 PF04816 tRNA (adenine(22)-N(1))-methyltransferase J4A01_11840 PF13442 Cytochrome C oxidase, cbb3-type, subunit III J4A01_11845 PF03979 Sigma-70 factor, region 1.1 J4A01_11845 PF00140 Sigma-70 factor, region 1.2 J4A01_11845 PF04542 Sigma-70 region 2 J4A01_11845 PF04539 Sigma-70 region 3 J4A01_11845 PF04545 Sigma-70, region 4 J4A01_11850 PF08275 DNA primase catalytic core, N-terminal domain J4A01_11850 PF01807 CHC2 zinc finger J4A01_11850 PF10410 DnaB-helicase binding domain of primase J4A01_11855 PF02639 Uncharacterized BCR, YaiI/YqxD family COG1671 J4A01_11860 PF03618 Kinase/pyrophosphorylase J4A01_11865 PF00571 CBS domain J4A01_11865 PF08279 HTH domain J4A01_11870 PF02092 Glycyl-tRNA synthetase beta subunit J4A01_11875 PF02091 Glycyl-tRNA synthetase alpha subunit J4A01_11880 PF02565 Recombination protein O C terminal J4A01_11880 PF11967 Recombination protein O N terminal J4A01_11885 PF14006 YqzL-like protein J4A01_11890 PF07650 KH domain J4A01_11890 PF01926 50S ribosome-binding GTPase J4A01_11895 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region J4A01_11900 PF01219 Prokaryotic diacylglycerol kinase J4A01_11905 PF02130 Uncharacterized protein family UPF0054 J4A01_11910 PF07698 7TM receptor with intracellular HD hydrolase J4A01_11910 PF07697 7TM-HD extracellular J4A01_11910 PF01966 HD domain J4A01_11915 PF02562 PhoH-like protein J4A01_11920 PF06898 Putative stage IV sporulation protein YqfD J4A01_11925 PF07873 YabP family J4A01_11935 PF12127 SigmaW regulon antibacterial J4A01_11940 PF01957 NfeD-like C-terminal, partner-binding J4A01_11940 PF01972 Serine dehydrogenase proteinase J4A01_11945 PF09424 Yqey-like protein J4A01_11950 PF01165 Ribosomal protein S21 J4A01_11955 PF02690 Na+/Pi-cotransporter J4A01_11960 PF04055 Radical SAM superfamily J4A01_11960 PF01938 TRAM domain J4A01_11960 PF00919 Uncharacterized protein family UPF0004 J4A01_11965 PF04452 RNA methyltransferase J4A01_11975 PF00684 DnaJ central domain J4A01_11975 PF00226 DnaJ domain J4A01_11975 PF01556 DnaJ C terminal domain J4A01_11980 PF00012 Hsp70 protein J4A01_11985 PF01025 GrpE J4A01_11990 PF01628 HrcA protein C terminal domain J4A01_11995 PF06969 HemN C-terminal domain J4A01_11995 PF04055 Radical SAM superfamily J4A01_12000 PF00679 Elongation factor G C-terminus J4A01_12000 PF00009 Elongation factor Tu GTP binding domain J4A01_12000 PF03144 Elongation factor Tu domain 2 J4A01_12000 PF06421 GTP-binding protein LepA C-terminus J4A01_12005 PF12438 Protein of unknown function (DUF3679) J4A01_12010 PF07454 Stage II sporulation protein P (SpoIIP) J4A01_12015 PF03418 Germination protease J4A01_12020 PF01649 Ribosomal protein S20 J4A01_12025 PF06144 DNA polymerase III, delta subunit J4A01_12035 PF14141 YqzM-like protein J4A01_12040 PF03772 Competence protein J4A01_12040 PF13567 Domain of unknown function (DUF4131) J4A01_12040 PF00753 Metallo-beta-lactamase superfamily J4A01_12045 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region J4A01_12050 PF10531 SLBB domain J4A01_12055 PF03807 NADP oxidoreductase coenzyme F420-dependent J4A01_12055 PF14748 Pyrroline-5-carboxylate reductase dimerisation J4A01_12060 PF13649 Methyltransferase domain J4A01_12070 PF01966 HD domain J4A01_12075 PF01467 Cytidylyltransferase-like J4A01_12080 PF01985 CRS1 / YhbY (CRM) domain J4A01_12085 PF18317 Shikimate 5'-dehydrogenase C-terminal domain J4A01_12085 PF08501 Shikimate dehydrogenase substrate binding domain J4A01_12085 PF01488 Shikimate / quinate 5-dehydrogenase J4A01_12090 PF01926 50S ribosome-binding GTPase J4A01_12100 PF08970 Sporulation inhibitor A J4A01_12105 PF00657 GDSL-like Lipase/Acylhydrolase J4A01_12110 PF01522 Polysaccharide deacetylase J4A01_12115 PF09335 SNARE associated Golgi protein J4A01_12130 PF04545 Sigma-70, region 4 J4A01_12130 PF04542 Sigma-70 region 2 J4A01_12140 PF01177 Asp/Glu/Hydantoin racemase J4A01_12145 PF10844 Protein of unknown function (DUF2577) J4A01_12155 PF01638 HxlR-like helix-turn-helix J4A01_12160 PF00248 Aldo/keto reductase family J4A01_12180 PF09639 YjcQ protein J4A01_12225 PF06146 Phosphate-starvation-inducible E J4A01_12230 PF00512 His Kinase A (phospho-acceptor) domain J4A01_12235 PF00072 Response regulator receiver domain J4A01_12235 PF00486 Transcriptional regulatory protein, C terminal J4A01_12240 PF04235 Protein of unknown function (DUF418) J4A01_12250 PF00583 Acetyltransferase (GNAT) family J4A01_12260 PF07690 Major Facilitator Superfamily J4A01_12265 PF08050 Tetracycline resistance leader peptide J4A01_12270 PF00583 Acetyltransferase (GNAT) family J4A01_12275 PF05163 DinB family J4A01_12295 PF01418 Helix-turn-helix domain, rpiR family J4A01_12295 PF01380 SIS domain J4A01_12300 PF01238 Phosphomannose isomerase type I J4A01_12305 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit J4A01_12305 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 J4A01_12305 PF02378 Phosphotransferase system, EIIC J4A01_12310 PF05043 Mga helix-turn-helix domain J4A01_12310 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 J4A01_12310 PF08279 HTH domain J4A01_12310 PF00874 PRD domain J4A01_12315 PF12706 Beta-lactamase superfamily domain J4A01_12320 PF04073 Aminoacyl-tRNA editing domain J4A01_12325 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family J4A01_12325 PF03466 LysR substrate binding domain J4A01_12330 PF07690 Major Facilitator Superfamily J4A01_12335 PF00667 FAD binding domain J4A01_12335 PF00258 Flavodoxin J4A01_12335 PF00175 Oxidoreductase NAD-binding domain J4A01_12335 PF00067 Cytochrome P450 J4A01_12340 PF00440 Bacterial regulatory proteins, tetR family J4A01_12340 PF16295 Tetracyclin repressor-like, C-terminal domain J4A01_12345 PF08241 Methyltransferase domain J4A01_12355 PF09501 Probable sporulation protein (Bac_small_yrzI) J4A01_12360 PF01226 Formate/nitrite transporter J4A01_12365 PF10057 Uncharacterized conserved protein (DUF2294) J4A01_12370 PF00037 4Fe-4S binding domain J4A01_12370 PF04879 Molybdopterin oxidoreductase Fe4S4 domain J4A01_12370 PF00384 Molybdopterin oxidoreductase J4A01_12370 PF01568 Molydopterin dinucleotide binding domain J4A01_12370 PF10588 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region J4A01_12375 PF07849 Protein of unknown function (DUF1641) J4A01_12380 PF14143 YrhC-like protein J4A01_12385 PF01053 Cys/Met metabolism PLP-dependent enzyme J4A01_12390 PF00291 Pyridoxal-phosphate dependent enzyme J4A01_12395 PF01048 Phosphorylase superfamily J4A01_12400 PF13649 Methyltransferase domain J4A01_12405 PF10750 Protein of unknown function (DUF2536) J4A01_12410 PF07423 Domain of unknown function (DUF1510) J4A01_12415 PF00905 Penicillin binding protein transpeptidase domain J4A01_12415 PF03717 Penicillin-binding Protein dimerisation domain J4A01_12420 PF01272 Transcription elongation factor, GreA/GreB, C-term J4A01_12420 PF03449 Transcription elongation factor, N-terminal J4A01_12425 PF00485 Phosphoribulokinase / Uridine kinase family J4A01_12430 PF01136 Peptidase family U32 J4A01_12430 PF16325 Peptidase family U32 C-terminal domain J4A01_12435 PF01136 Peptidase family U32 J4A01_12440 PF01596 O-methyltransferase J4A01_12445 PF02618 YceG-like family J4A01_12450 PF06949 Protein of unknown function (DUF1292) J4A01_12455 PF03652 Holliday junction resolvase J4A01_12460 PF06135 IreB regulatory phosphoprotein J4A01_12465 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain J4A01_12465 PF02272 DHHA1 domain J4A01_12465 PF01411 tRNA synthetases class II (A) J4A01_12470 PF01594 AI-2E family transporter J4A01_12475 PF00005 ABC transporter J4A01_12480 PF00497 Bacterial extracellular solute-binding proteins, family 3 J4A01_12485 PF00528 Binding-protein-dependent transport system inner membrane component J4A01_12490 PF00528 Binding-protein-dependent transport system inner membrane component J4A01_12495 PF13056 Protein of unknown function (DUF3918) J4A01_12505 PF05239 PRC-barrel domain J4A01_12510 PF14490 Helix-hairpin-helix containing domain J4A01_12510 PF18335 ATP-dependent RecD-like DNA helicase SH3 domain J4A01_12510 PF13538 UvrD-like helicase C-terminal domain J4A01_12515 PF07719 Tetratricopeptide repeat J4A01_12515 PF13181 Tetratricopeptide repeat J4A01_12525 PF00266 Aminotransferase class-V J4A01_12530 PF02082 Transcriptional regulator J4A01_12535 PF16193 AAA C-terminal domain J4A01_12535 PF12002 MgsA AAA+ ATPase C terminal J4A01_12535 PF05496 Holliday junction DNA helicase RuvB P-loop domain J4A01_12540 PF00899 ThiF family J4A01_12550 PF02938 GAD domain J4A01_12550 PF00152 tRNA synthetases class II (D, K and N) J4A01_12550 PF01336 OB-fold nucleic acid binding domain J4A01_12555 PF03129 Anticodon binding domain J4A01_12555 PF13393 Histidyl-tRNA synthetase J4A01_12560 PF17449 Uncharacterized YrzK-like J4A01_12565 PF01520 N-acetylmuramoyl-L-alanine amidase J4A01_12565 PF08239 Bacterial SH3 domain J4A01_12570 PF02580 D-Tyr-tRNA(Tyr) deacylase J4A01_12575 PF04607 Region found in RelA / SpoT proteins J4A01_12575 PF13291 ACT domain J4A01_12575 PF02824 TGS domain J4A01_12580 PF00156 Phosphoribosyl transferase domain J4A01_12585 PF01368 DHH family J4A01_12585 PF02272 DHHA1 domain J4A01_12585 PF17768 RecJ OB domain J4A01_12585 PF10141 Single-strand DNA-specific exonuclease, C terminal domain J4A01_12590 PF06305 Lipopolysaccharide assembly protein A domain J4A01_12595 PF02080 TrkA-C domain J4A01_12600 PF07549 SecD/SecF GG Motif J4A01_12600 PF02355 Protein export membrane protein J4A01_12605 PF13797 Post-transcriptional regulator J4A01_12610 PF01943 Polysaccharide biosynthesis protein J4A01_12610 PF14667 Polysaccharide biosynthesis C-terminal domain J4A01_12615 PF04239 Protein of unknown function (DUF421) J4A01_12620 PF12670 Protein of unknown function (DUF3792) J4A01_12625 PF02699 Preprotein translocase subunit J4A01_12630 PF01702 Queuine tRNA-ribosyltransferase J4A01_12635 PF02547 Queuosine biosynthesis protein J4A01_12640 PF11146 Protein of unknown function (DUF2905) J4A01_12645 PF17864 RuvB AAA lid domain J4A01_12645 PF05491 RuvB C-terminal winged helix domain J4A01_12645 PF05496 Holliday junction DNA helicase RuvB P-loop domain J4A01_12650 PF07499 RuvA, C-terminal domain J4A01_12650 PF01330 RuvA N terminal domain J4A01_12655 PF08955 BofC C-terminal domain J4A01_12655 PF08977 Bypass of Forespore C, N terminal J4A01_12660 PF09580 Sporulation lipoprotein YhcN/YlaJ (Spore_YhcN_YlaJ) J4A01_12665 PF01476 LysM domain J4A01_12670 PF02445 Quinolinate synthetase A protein J4A01_12675 PF01729 Quinolinate phosphoribosyl transferase, C-terminal domain J4A01_12675 PF02749 Quinolinate phosphoribosyl transferase, N-terminal domain J4A01_12680 PF00890 FAD binding domain J4A01_12680 PF02910 Fumarate reductase flavoprotein C-term J4A01_12685 PF00266 Aminotransferase class-V J4A01_12690 PF02829 3H domain J4A01_12690 PF08279 HTH domain J4A01_12695 PF01842 ACT domain J4A01_12695 PF00800 Prephenate dehydratase J4A01_12700 PF01842 ACT domain J4A01_12705 PF09269 Domain of unknown function (DUF1967) J4A01_12705 PF01926 50S ribosome-binding GTPase J4A01_12705 PF01018 GTP1/OBG J4A01_12710 PF14682 Sporulation initiation phospho-transferase B, C-terminal J4A01_12710 PF14689 Sensor_kinase_SpoOB-type, alpha-helical domain J4A01_12715 PF01016 Ribosomal L27 protein J4A01_12720 PF04327 Cysteine protease Prp J4A01_12725 PF00829 Ribosomal prokaryotic L21 protein J4A01_12730 PF02163 Peptidase family M50 J4A01_12735 PF01551 Peptidase family M23 J4A01_12740 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain J4A01_12745 PF03775 Septum formation inhibitor MinC, C-terminal domain J4A01_12750 PF04093 rod shape-determining protein MreD J4A01_12755 PF04085 rod shape-determining protein MreC J4A01_12765 PF04002 RadC-like JAB domain J4A01_12770 PF02545 Maf-like protein J4A01_12775 PF05036 Sporulation related domain J4A01_12780 PF06750 Bacterial Peptidase A24 N-terminal domain J4A01_12780 PF01478 Type IV leader peptidase family J4A01_12785 PF02875 Mur ligase family, glutamate ligase domain J4A01_12785 PF08245 Mur ligase middle domain J4A01_12790 PF10458 Valyl tRNA synthetase tRNA binding arm J4A01_12790 PF00133 tRNA synthetases class I (I, L, M and V) J4A01_12790 PF08264 Anticodon-binding domain of tRNA J4A01_12805 PF01476 LysM domain J4A01_12810 PF00202 Aminotransferase class-III J4A01_12815 PF00490 Delta-aminolevulinic acid dehydratase J4A01_12820 PF02602 Uroporphyrinogen-III synthase HemD J4A01_12825 PF01379 Porphobilinogen deaminase, dipyromethane cofactor binding domain J4A01_12825 PF03900 Porphobilinogen deaminase, C-terminal domain J4A01_12830 PF01578 Cytochrome C assembly protein J4A01_12835 PF00745 Glutamyl-tRNAGlu reductase, dimerisation domain J4A01_12835 PF05201 Glutamyl-tRNAGlu reductase, N-terminal domain J4A01_12835 PF01488 Shikimate / quinate 5-dehydrogenase J4A01_12845 PF01926 50S ribosome-binding GTPase J4A01_12850 PF00004 ATPase family associated with various cellular activities (AAA) J4A01_12850 PF05362 Lon protease (S16) C-terminal proteolytic domain J4A01_12850 PF02190 ATP-dependent protease La (LON) substrate-binding domain J4A01_12855 PF05362 Lon protease (S16) C-terminal proteolytic domain J4A01_12855 PF00004 ATPase family associated with various cellular activities (AAA) J4A01_12860 PF07724 AAA domain (Cdc48 subfamily) J4A01_12860 PF10431 C-terminal, D2-small domain, of ClpB protein J4A01_12860 PF06689 ClpX C4-type zinc finger J4A01_12865 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase J4A01_12865 PF05698 Bacterial trigger factor protein (TF) C-terminus J4A01_12865 PF05697 Bacterial trigger factor protein (TF) J4A01_12875 PF00694 Aconitase C-terminal domain J4A01_12880 PF00330 Aconitase family (aconitate hydratase) J4A01_12885 PF00180 Isocitrate/isopropylmalate dehydrogenase J4A01_12890 PF08502 LeuA allosteric (dimerisation) domain J4A01_12890 PF00682 HMGL-like J4A01_12895 PF07991 Acetohydroxy acid isomeroreductase, NADPH-binding domain J4A01_12895 PF01450 Acetohydroxy acid isomeroreductase, catalytic domain J4A01_12900 PF01842 ACT domain J4A01_12900 PF10369 Small subunit of acetolactate synthase J4A01_12905 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain J4A01_12905 PF00205 Thiamine pyrophosphate enzyme, central domain J4A01_12905 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain J4A01_12930 PF12850 Calcineurin-like phosphoesterase superfamily domain J4A01_12935 PF01725 Ham1 family J4A01_12940 PF03725 3' exoribonuclease family, domain 2 J4A01_12940 PF01138 3' exoribonuclease family, domain 1 J4A01_12945 PF10646 Sporulation and spore germination J4A01_12950 PF01177 Asp/Glu/Hydantoin racemase J4A01_12955 PF01047 MarR family J4A01_12960 PF00196 Bacterial regulatory proteins, luxR family J4A01_12965 PF03061 Thioesterase superfamily J4A01_12970 PF13085 2Fe-2S iron-sulfur cluster binding domain J4A01_12970 PF13183 4Fe-4S dicluster domain J4A01_12975 PF00890 FAD binding domain J4A01_12975 PF02910 Fumarate reductase flavoprotein C-term J4A01_12980 PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit J4A01_12985 PF10702 Protein of unknown function (DUF2507) J4A01_12990 PF00696 Amino acid kinase family J4A01_12990 PF01842 ACT domain J4A01_12990 PF13840 ACT domain J4A01_12995 PF08459 UvrC Helix-hairpin-helix N-terminal J4A01_12995 PF02151 UvrB/uvrC motif J4A01_12995 PF01541 GIY-YIG catalytic domain J4A01_13000 PF00085 Thioredoxin J4A01_13005 PF06964 Alpha-L-arabinofuranosidase C-terminal domain J4A01_13010 PF01012 Electron transfer flavoprotein domain J4A01_13010 PF00766 Electron transfer flavoprotein FAD-binding domain J4A01_13015 PF01012 Electron transfer flavoprotein domain J4A01_13020 PF00378 Enoyl-CoA hydratase/isomerase J4A01_13025 PF08359 YsiA-like protein, C-terminal region J4A01_13025 PF00440 Bacterial regulatory proteins, tetR family J4A01_13030 PF13193 AMP-binding enzyme C-terminal domain J4A01_13030 PF00501 AMP-binding enzyme J4A01_13040 PF03994 Domain of Unknown Function (DUF350) J4A01_13045 PF01713 Smr domain J4A01_13045 PF00488 MutS domain V J4A01_13050 PF02811 PHP domain J4A01_13050 PF14716 Helix-hairpin-helix domain J4A01_13050 PF14791 DNA polymerase beta thumb J4A01_13055 PF02674 Colicin V production protein J4A01_13060 PF05164 Cell division protein ZapA J4A01_13065 PF11858 Domain of unknown function (DUF3378) J4A01_13065 PF01351 Ribonuclease HII J4A01_13070 PF03484 tRNA synthetase B5 domain J4A01_13070 PF03147 Ferredoxin-fold anticodon binding domain J4A01_13070 PF01588 Putative tRNA binding domain J4A01_13070 PF17759 Phenylalanyl tRNA synthetase beta chain CLM domain J4A01_13070 PF03483 B3/4 domain J4A01_13075 PF02912 Aminoacyl tRNA synthetase class II, N-terminal domain J4A01_13075 PF01409 tRNA synthetases class II core domain (F) J4A01_13080 PF00588 SpoU rRNA Methylase family J4A01_13080 PF08032 RNA 2'-O ribose methyltransferase substrate binding J4A01_13085 PF14098 Small, acid-soluble spore protein I J4A01_13090 PF05651 Putative sugar diacid recognition J4A01_13090 PF17853 GGDEF-like domain J4A01_13090 PF13556 PucR C-terminal helix-turn-helix domain J4A01_13095 PF02913 FAD linked oxidases, C-terminal domain J4A01_13095 PF01565 FAD binding domain J4A01_13100 PF13183 4Fe-4S dicluster domain J4A01_13100 PF02754 Cysteine-rich domain J4A01_13105 PF02554 Carbon starvation protein CstA J4A01_13105 PF13722 5TM C-terminal transporter carbon starvation CstA J4A01_13110 PF06964 Alpha-L-arabinofuranosidase C-terminal domain J4A01_13115 PF00528 Binding-protein-dependent transport system inner membrane component J4A01_13120 PF00528 Binding-protein-dependent transport system inner membrane component J4A01_13125 PF01547 Bacterial extracellular solute-binding protein J4A01_13130 PF13685 Iron-containing alcohol dehydrogenase J4A01_13135 PF13344 Haloacid dehalogenase-like hydrolase J4A01_13140 PF00596 Class II Aldolase and Adducin N-terminal domain J4A01_13145 PF02782 FGGY family of carbohydrate kinases, C-terminal domain J4A01_13145 PF00370 FGGY family of carbohydrate kinases, N-terminal domain J4A01_13150 PF11762 L-arabinose isomerase C-terminal domain J4A01_13150 PF02610 L-arabinose isomerase J4A01_13155 PF04616 Glycosyl hydrolases family 43 J4A01_13160 PF05343 M42 glutamyl aminopeptidase J4A01_13170 PF06961 Protein of unknown function (DUF1294) J4A01_13175 PF00453 Ribosomal protein L20 J4A01_13180 PF01632 Ribosomal protein L35 J4A01_13185 PF00707 Translation initiation factor IF-3, C-terminal domain J4A01_13185 PF05198 Translation initiation factor IF-3, N-terminal domain J4A01_13190 PF04172 LrgB-like family J4A01_13195 PF03788 LrgA family J4A01_13200 PF04397 LytTr DNA-binding domain J4A01_13200 PF00072 Response regulator receiver domain J4A01_13205 PF06580 Histidine kinase J4A01_13205 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase J4A01_13205 PF07694 5TMR of 5TMR-LYT J4A01_13210 PF13419 Haloacid dehalogenase-like hydrolase J4A01_13215 PF03129 Anticodon binding domain J4A01_13215 PF02824 TGS domain J4A01_13215 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) J4A01_13215 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain J4A01_13220 PF08812 YtxC-like family J4A01_13225 PF09335 SNARE associated Golgi protein J4A01_13230 PF01695 IstB-like ATP binding protein J4A01_13230 PF07319 Primosomal protein DnaI N-terminus J4A01_13235 PF07261 Replication initiation and membrane attachment J4A01_13240 PF03477 ATP cone domain J4A01_13245 PF02675 S-adenosylmethionine decarboxylase J4A01_13250 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain J4A01_13250 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain J4A01_13255 PF01638 HxlR-like helix-turn-helix J4A01_13260 PF07690 Major Facilitator Superfamily J4A01_13265 PF00248 Aldo/keto reductase family J4A01_13270 PF01121 Dephospho-CoA kinase J4A01_13275 PF02659 Putative manganese efflux pump J4A01_13280 PF06831 Formamidopyrimidine-DNA glycosylase H2TH domain J4A01_13280 PF06827 Zinc finger found in FPG and IleRS J4A01_13280 PF01149 Formamidopyrimidine-DNA glycosylase N-terminal domain J4A01_13285 PF01367 5'-3' exonuclease, C-terminal SAM fold J4A01_13285 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain J4A01_13285 PF00476 DNA polymerase family A J4A01_13290 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase J4A01_13290 PF00512 His Kinase A (phospho-acceptor) domain J4A01_13290 PF00989 PAS fold J4A01_13290 PF16736 Single Cache-like J4A01_13295 PF00486 Transcriptional regulatory protein, C terminal J4A01_13295 PF00072 Response regulator receiver domain J4A01_13300 PF02866 lactate/malate dehydrogenase, alpha/beta C-terminal domain J4A01_13300 PF00056 lactate/malate dehydrogenase, NAD binding domain J4A01_13305 PF00180 Isocitrate/isopropylmalate dehydrogenase J4A01_13310 PF00285 Citrate synthase, C-terminal domain J4A01_13325 PF11208 Protein of unknown function (DUF2992) J4A01_13335 PF04284 Protein of unknown function (DUF441) J4A01_13340 PF01594 AI-2E family transporter J4A01_13345 PF04186 FxsA cytoplasmic membrane protein J4A01_13350 PF02887 Pyruvate kinase, alpha/beta domain J4A01_13350 PF00391 PEP-utilising enzyme, mobile domain J4A01_13350 PF00224 Pyruvate kinase, barrel domain J4A01_13355 PF00365 Phosphofructokinase J4A01_13360 PF03255 Acetyl co-enzyme A carboxylase carboxyltransferase alpha subunit J4A01_13365 PF01039 Carboxyl transferase domain J4A01_13365 PF17848 Acetyl-coA carboxylase zinc finger domain J4A01_13370 PF03949 Malic enzyme, NAD binding domain J4A01_13370 PF00390 Malic enzyme, N-terminal domain J4A01_13375 PF07733 Bacterial DNA polymerase III alpha NTPase domain J4A01_13375 PF17657 Bacterial DNA polymerase III alpha subunit finger domain J4A01_13375 PF14579 Helix-hairpin-helix motif J4A01_13375 PF02811 PHP domain J4A01_13375 PF01336 OB-fold nucleic acid binding domain J4A01_13380 PF14034 Sporulation protein YtrH J4A01_13395 PF01368 DHH family J4A01_13395 PF02272 DHHA1 domain J4A01_13400 PF14007 YtpI-like protein J4A01_13405 PF03061 Thioesterase superfamily J4A01_13405 PF00392 Bacterial regulatory proteins, gntR family J4A01_13405 PF00571 CBS domain J4A01_13405 PF07085 DRTGG domain J4A01_13420 PF14698 Argininosuccinate lyase C-terminal J4A01_13420 PF00206 Lyase J4A01_13425 PF00764 Arginosuccinate synthase J4A01_13430 PF00994 Probable molybdopterin binding domain J4A01_13435 PF00871 Acetokinase family J4A01_13440 PF02384 N-6 DNA Methylase J4A01_13445 PF08534 Redoxin J4A01_13450 PF09579 Sporulation protein YtfJ (Spore_YtfJ) J4A01_13455 PF11167 Protein of unknown function (DUF2953) J4A01_13460 PF06271 RDD family J4A01_13465 PF01343 Peptidase family S49 J4A01_13470 PF01513 ATP-NAD kinase J4A01_13475 PF07969 Amidohydrolase family J4A01_13480 PF00501 AMP-binding enzyme J4A01_13480 PF13193 AMP-binding enzyme C-terminal domain J4A01_13485 PF00269 Small, acid-soluble spore proteins, alpha/beta type J4A01_13490 PF02568 Thiamine biosynthesis protein (ThiI) J4A01_13490 PF02926 THUMP domain J4A01_13495 PF00266 Aminotransferase class-V J4A01_13500 PF05525 Branched-chain amino acid transport protein J4A01_13505 PF06160 Septation ring formation regulator, EzrA J4A01_13510 PF02811 PHP domain J4A01_13515 PF00440 Bacterial regulatory proteins, tetR family J4A01_13520 PF13185 GAF domain J4A01_13525 PF00990 Diguanylate cyclase, GGDEF domain J4A01_13530 PF01479 S4 domain J4A01_13530 PF00163 Ribosomal protein S4/S9 N-terminal domain J4A01_13535 PF00171 Aldehyde dehydrogenase family J4A01_13540 PF09346 SMI1 / KNR4 family (SUKH-1) J4A01_13570 PF16302 Domain of unknown function (DUF4944) J4A01_13585 PF00970 Oxidoreductase FAD-binding domain J4A01_13585 PF00042 Globin J4A01_13585 PF00175 Oxidoreductase NAD-binding domain J4A01_13600 PF01965 DJ-1/PfpI family J4A01_13615 PF01545 Cation efflux family J4A01_13615 PF16916 Dimerisation domain of Zinc Transporter J4A01_13620 PF11495 Archaeal transcriptional regulator TrmB J4A01_13620 PF01978 Sugar-specific transcriptional regulator TrmB J4A01_13635 PF00579 tRNA synthetases class I (W and Y) J4A01_13635 PF01479 S4 domain J4A01_13640 PF13193 AMP-binding enzyme C-terminal domain J4A01_13640 PF00501 AMP-binding enzyme J4A01_13645 PF00583 Acetyltransferase (GNAT) family J4A01_13650 PF00571 CBS domain J4A01_13655 PF00850 Histone deacetylase domain J4A01_13660 PF00691 OmpA family J4A01_13660 PF13677 Membrane MotB of proton-channel complex MotA/MotB J4A01_13665 PF01618 MotA/TolQ/ExbB proton channel family J4A01_13670 PF00356 Bacterial regulatory proteins, lacI family J4A01_13675 PF01817 Chorismate mutase type II J4A01_13675 PF00793 DAHP synthetase I family J4A01_13680 PF11009 Protein of unknown function (DUF2847) J4A01_13685 PF12732 YtxH-like protein J4A01_13690 PF06103 Bacterial protein of unknown function (DUF948) J4A01_13695 PF01225 Mur ligase family, catalytic domain J4A01_13695 PF02875 Mur ligase family, glutamate ligase domain J4A01_13695 PF08245 Mur ligase middle domain J4A01_13700 PF17854 FtsK alpha domain J4A01_13700 PF09397 Ftsk gamma domain J4A01_13700 PF01580 FtsK/SpoIIIE family J4A01_13705 PF14794 Domain of unknown function (DUF4479) J4A01_13705 PF01588 Putative tRNA binding domain J4A01_13710 PF07285 Protein of unknown function (DUF1444) J4A01_13715 PF00085 Thioredoxin J4A01_13720 PF11071 Nucleoside 2-deoxyribosyltransferase YtoQ J4A01_13725 PF05343 M42 glutamyl aminopeptidase J4A01_13730 PF03413 Peptidase propeptide and YPEB domain J4A01_13735 PF00390 Malic enzyme, N-terminal domain J4A01_13735 PF03949 Malic enzyme, NAD binding domain J4A01_13740 PF00753 Metallo-beta-lactamase superfamily J4A01_13745 PF02390 Putative methyltransferase J4A01_13750 PF14165 YtzH-like protein J4A01_13755 PF01636 Phosphotransferase enzyme family J4A01_13760 PF00781 Diacylglycerol kinase catalytic domain J4A01_13775 PF00291 Pyridoxal-phosphate dependent enzyme J4A01_13780 PF01546 Peptidase family M20/M25/M40 J4A01_13785 PF00860 Permease family J4A01_13790 PF05975 Bacterial ABC transporter protein EcsB J4A01_13795 PF00005 ABC transporter J4A01_13800 PF08220 DeoR-like helix-turn-helix domain J4A01_13805 PF00849 RNA pseudouridylate synthase J4A01_13805 PF01479 S4 domain J4A01_13810 PF01943 Polysaccharide biosynthesis protein J4A01_13810 PF14667 Polysaccharide biosynthesis C-terminal domain J4A01_13820 PF02028 BCCT, betaine/carnitine/choline family transporter J4A01_13825 PF10957 Sporulation protein Cse60 J4A01_13830 PF00356 Bacterial regulatory proteins, lacI family J4A01_13835 PF01547 Bacterial extracellular solute-binding protein J4A01_13840 PF00528 Binding-protein-dependent transport system inner membrane component J4A01_13845 PF00528 Binding-protein-dependent transport system inner membrane component J4A01_13850 PF11975 Family 4 glycosyl hydrolase C-terminal domain J4A01_13850 PF02056 Family 4 glycosyl hydrolase J4A01_13860 PF00581 Rhodanese-like domain J4A01_13865 PF08264 Anticodon-binding domain of tRNA J4A01_13865 PF00133 tRNA synthetases class I (I, L, M and V) J4A01_13865 PF13603 Leucyl-tRNA synthetase, Domain 2 J4A01_13865 PF09334 tRNA synthetases class I (M) J4A01_13870 PF14074 Protein of unknown function (DUF4257) J4A01_13875 PF01740 STAS domain J4A01_13875 PF13426 PAS domain J4A01_13880 PF07690 Major Facilitator Superfamily J4A01_13885 PF09529 Integral membrane protein (intg_mem_TP0381) J4A01_13890 PF02687 FtsX-like permease family J4A01_13895 PF00005 ABC transporter J4A01_13900 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase J4A01_13905 PF00486 Transcriptional regulatory protein, C terminal J4A01_13905 PF00072 Response regulator receiver domain J4A01_13910 PF02687 FtsX-like permease family J4A01_13910 PF12704 MacB-like periplasmic core domain J4A01_13915 PF00005 ABC transporter J4A01_13935 PF00005 ABC transporter J4A01_13940 PF00392 Bacterial regulatory proteins, gntR family J4A01_13945 PF10732 Protein of unknown function (DUF2524) J4A01_13950 PF04055 Radical SAM superfamily J4A01_13950 PF16199 Radical_SAM C-terminal domain J4A01_13955 PF06962 Putative rRNA methylase J4A01_13965 PF03009 Glycerophosphoryl diester phosphodiesterase family J4A01_13970 PF10776 Protein of unknown function (DUF2600) J4A01_13975 PF12146 Serine aminopeptidase, S33 J4A01_13980 PF00132 Bacterial transferase hexapeptide (six repeats) J4A01_13985 PF00324 Amino acid permease J4A01_13990 PF00733 Asparagine synthase J4A01_13990 PF13537 Glutamine amidotransferase domain J4A01_13995 PF00438 S-adenosylmethionine synthetase, N-terminal domain J4A01_13995 PF02773 S-adenosylmethionine synthetase, C-terminal domain J4A01_13995 PF02772 S-adenosylmethionine synthetase, central domain J4A01_14000 PF01293 Phosphoenolpyruvate carboxykinase J4A01_14005 PF10763 Protein of unknown function (DUF2584) J4A01_14010 PF00326 Prolyl oligopeptidase family J4A01_14020 PF00005 ABC transporter J4A01_14025 PF00528 Binding-protein-dependent transport system inner membrane component J4A01_14030 PF00293 NUDIX domain J4A01_14035 PF05105 Bacteriophage holin family J4A01_14040 PF00210 Ferritin-like domain J4A01_14050 PF13115 YtkA-like J4A01_14055 PF02664 S-Ribosylhomocysteinase (LuxS) J4A01_14060 PF01809 Putative membrane protein insertion efficiency factor J4A01_14065 PF00484 Carbonic anhydrase J4A01_14070 PF01197 Ribosomal protein L31 J4A01_14075 PF01654 Cytochrome bd terminal oxidase subunit I J4A01_14080 PF02322 Cytochrome bd terminal oxidase subunit II J4A01_14085 PF07561 Domain of Unknown Function (DUF1540) J4A01_14095 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain J4A01_14095 PF13378 Enolase C-terminal domain-like J4A01_14100 PF00501 AMP-binding enzyme J4A01_14100 PF13193 AMP-binding enzyme C-terminal domain J4A01_14105 PF00378 Enoyl-CoA hydratase/isomerase J4A01_14110 PF00561 alpha/beta hydrolase fold J4A01_14115 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain J4A01_14115 PF16582 Middle domain of thiamine pyrophosphate J4A01_14115 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain J4A01_14120 PF00425 chorismate binding enzyme J4A01_14125 PF01258 Prokaryotic dksA/traR C4-type zinc finger J4A01_14130 PF03073 TspO/MBR family J4A01_14255 PF09515 Thiamine transporter protein (Thia_YuaJ) J4A01_14260 PF01145 SPFH domain / Band 7 family J4A01_14260 PF15975 Flotillin J4A01_14270 PF12867 DinB superfamily J4A01_14280 PF00465 Iron-containing alcohol dehydrogenase J4A01_14285 PF00171 Aldehyde dehydrogenase family J4A01_14295 PF17735 Biofilm surface layer A J4A01_14300 PF02254 TrkA-N domain J4A01_14300 PF02080 TrkA-C domain J4A01_14305 PF01832 Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase J4A01_14305 PF13457 GW (Gly-Tryp) dipeptide domain J4A01_14310 PF00175 Oxidoreductase NAD-binding domain J4A01_14310 PF00042 Globin J4A01_14310 PF00970 Oxidoreductase FAD-binding domain J4A01_14330 PF02673 Bacitracin resistance protein BacA J4A01_14335 PF01594 AI-2E family transporter J4A01_14340 PF02894 Oxidoreductase family, C-terminal alpha/beta domain J4A01_14340 PF01408 Oxidoreductase family, NAD-binding Rossmann fold J4A01_14345 PF01965 DJ-1/PfpI family J4A01_14350 PF00672 HAMP domain J4A01_14350 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain J4A01_14350 PF02743 Cache domain J4A01_14355 PF02743 Cache domain J4A01_14355 PF00672 HAMP domain J4A01_14355 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain J4A01_14360 PF02743 Cache domain J4A01_14360 PF00672 HAMP domain J4A01_14360 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain J4A01_14365 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain J4A01_14365 PF02743 Cache domain J4A01_14365 PF00672 HAMP domain J4A01_14380 PF03060 Nitronate monooxygenase J4A01_14385 PF01894 Uncharacterised protein family UPF0047 J4A01_14390 PF16657 Maltogenic Amylase, C-terminal domain J4A01_14390 PF00128 Alpha amylase, catalytic domain J4A01_14395 PF03471 Transporter associated domain J4A01_14395 PF01595 Cyclin M transmembrane N-terminal domain J4A01_14395 PF00571 CBS domain J4A01_14400 PF04298 Putative neutral zinc metallopeptidase J4A01_14410 PF11458 Membrane-integrating protein Mistic J4A01_14415 PF07885 Ion channel J4A01_14415 PF02254 TrkA-N domain J4A01_14420 PF08868 YugN-like family J4A01_14430 PF00342 Phosphoglucose isomerase J4A01_14435 PF03358 NADPH-dependent FMN reductase J4A01_14440 PF00857 Isochorismatase family J4A01_14445 PF00465 Iron-containing alcohol dehydrogenase J4A01_14450 PF00465 Iron-containing alcohol dehydrogenase J4A01_14455 PF04070 Domain of unknown function (DUF378) J4A01_14460 PF00575 S1 RNA binding domain J4A01_14465 PF00155 Aminotransferase class I and II J4A01_14470 PF01037 Lrp/AsnC ligand binding domain J4A01_14475 PF00561 alpha/beta hydrolase fold J4A01_14475 PF08386 TAP-like protein J4A01_14480 PF08958 Domain of unknown function (DUF1871) J4A01_14485 PF00155 Aminotransferase class I and II J4A01_14490 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase J4A01_14490 PF00512 His Kinase A (phospho-acceptor) domain J4A01_14495 PF08810 Kinase associated protein B J4A01_14500 PF00929 Exonuclease J4A01_14505 PF07690 Major Facilitator Superfamily J4A01_14510 PF00905 Penicillin binding protein transpeptidase domain J4A01_14510 PF00912 Transglycosylase J4A01_14515 PF04134 Protein of unknown function, DUF393 J4A01_14520 PF17328 Family of unknown function (DUF5366) J4A01_14525 PF14689 Sensor_kinase_SpoOB-type, alpha-helical domain J4A01_14525 PF17203 Single cache domain 3 J4A01_14525 PF00989 PAS fold J4A01_14525 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase J4A01_14530 PF00072 Response regulator receiver domain J4A01_14535 PF02608 ABC transporter substrate-binding protein PnrA-like J4A01_14540 PF00005 ABC transporter J4A01_14545 PF02653 Branched-chain amino acid transport system / permease component J4A01_14550 PF02653 Branched-chain amino acid transport system / permease component J4A01_14560 PF13244 Domain of unknown function (DUF4040) J4A01_14560 PF00361 Proton-conducting membrane transporter J4A01_14560 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus J4A01_14565 PF04039 Domain related to MnhB subunit of Na+/H+ antiporter J4A01_14570 PF00420 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L J4A01_14575 PF00361 Proton-conducting membrane transporter J4A01_14580 PF01899 Na+/H+ ion antiporter subunit J4A01_14585 PF04066 Multiple resistance and pH regulation protein F (MrpF / PhaF) J4A01_14590 PF03334 Na+/H+ antiporter subunit J4A01_14595 PF03061 Thioesterase superfamily J4A01_14600 PF00072 Response regulator receiver domain J4A01_14600 PF00196 Bacterial regulatory proteins, luxR family J4A01_14605 PF07730 Histidine kinase J4A01_14605 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase J4A01_14610 PF05952 Bacillus competence pheromone ComX J4A01_14620 PF08181 DegQ (SacQ) family J4A01_14635 PF00563 EAL domain J4A01_14635 PF08668 HDOD domain J4A01_14640 PF04095 Nicotinate phosphoribosyltransferase (NAPRTase) family J4A01_14640 PF17956 Nicotinate phosphoribosyltransferase C-terminal domain J4A01_14640 PF17767 Nicotinate phosphoribosyltransferase (NAPRTase) N-terminal domain J4A01_14645 PF00857 Isochorismatase family J4A01_14650 PF07997 Protein of unknown function (DUF1694) J4A01_14655 PF14166 YueH-like protein J4A01_14660 PF10676 Spore germination protein gerPA/gerPF J4A01_14665 PF01594 AI-2E family transporter J4A01_14670 PF10842 Protein of unknown function (DUF2642) J4A01_14675 PF01966 HD domain J4A01_14680 PF00106 short chain dehydrogenase J4A01_14685 PF17355 Family of unknown function (DUF5383) J4A01_14695 PF12538 DNA transporter J4A01_14695 PF01580 FtsK/SpoIIIE family J4A01_14700 PF10140 WXG100 protein secretion system (Wss), protein YukC J4A01_14705 PF08817 WXG100 protein secretion system (Wss), protein YukD J4A01_14710 PF06013 Proteins of 100 residues with WXG J4A01_14715 PF06018 CodY GAF-like domain J4A01_14715 PF17853 GGDEF-like domain J4A01_14715 PF13556 PucR C-terminal helix-turn-helix domain J4A01_14720 PF05222 Alanine dehydrogenase/PNT, N-terminal domain J4A01_14720 PF01262 Alanine dehydrogenase/PNT, C-terminal domain J4A01_14725 PF10042 Uncharacterized conserved protein (DUF2278) J4A01_14730 PF03621 MbtH-like protein J4A01_14735 PF00501 AMP-binding enzyme J4A01_14735 PF13193 AMP-binding enzyme C-terminal domain J4A01_14735 PF00550 Phosphopantetheine attachment site J4A01_14735 PF00975 Thioesterase domain J4A01_14735 PF00668 Condensation domain J4A01_14740 PF00857 Isochorismatase family J4A01_14740 PF00550 Phosphopantetheine attachment site J4A01_14745 PF00501 AMP-binding enzyme J4A01_14745 PF13193 AMP-binding enzyme C-terminal domain J4A01_14750 PF00425 chorismate binding enzyme J4A01_14755 PF00106 short chain dehydrogenase J4A01_14760 PF00756 Putative esterase J4A01_14765 PF00174 Oxidoreductase molybdopterin binding domain J4A01_14770 PF02632 BioY family J4A01_14775 PF13726 Na+-H+ antiporter family J4A01_14775 PF03553 Na+/H+ antiporter family J4A01_14780 PF00883 Cytosol aminopeptidase family, catalytic domain J4A01_14780 PF02789 Cytosol aminopeptidase family, N-terminal domain J4A01_14785 PF02681 Divergent PAP2 family J4A01_14790 PF06725 3D domain J4A01_14795 PF14068 Putative membrane protein J4A01_14800 PF17302 Family of unknown function (DUF5351) J4A01_14805 PF07992 Pyridine nucleotide-disulphide oxidoreductase J4A01_14810 PF07992 Pyridine nucleotide-disulphide oxidoreductase J4A01_14820 PF00478 IMP dehydrogenase / GMP reductase domain J4A01_14835 PF00005 ABC transporter J4A01_14845 PF09221 Bacteriocin class IId cyclical uberolysin-like J4A01_14855 PF13302 Acetyltransferase (GNAT) domain J4A01_14860 PF00106 short chain dehydrogenase J4A01_14865 PF01521 Iron-sulphur cluster biosynthesis J4A01_14870 PF01678 Diaminopimelate epimerase J4A01_14875 PF07662 Na+ dependent nucleoside transporter C-terminus J4A01_14875 PF01773 Na+ dependent nucleoside transporter N-terminus J4A01_14880 PF07293 Protein of unknown function (DUF1450) J4A01_14885 PF07992 Pyridine nucleotide-disulphide oxidoreductase J4A01_14890 PF07315 Protein of unknown function (DUF1462) J4A01_14895 PF01106 NifU-like domain J4A01_14900 PF07676 WD40-like Beta Propeller Repeat J4A01_14900 PF00326 Prolyl oligopeptidase family J4A01_14905 PF08544 GHMP kinases C terminal J4A01_14905 PF00288 GHMP kinases N terminal domain J4A01_14910 PF00291 Pyridoxal-phosphate dependent enzyme J4A01_14915 PF00742 Homoserine dehydrogenase J4A01_14915 PF03447 Homoserine dehydrogenase, NAD binding domain J4A01_14915 PF01842 ACT domain J4A01_14925 PF04608 Phosphatidylglycerophosphatase A J4A01_14930 PF13344 Haloacid dehalogenase-like hydrolase J4A01_14935 PF01934 Protein of unknown function DUF86 J4A01_14940 PF06265 Protein of unknown function (DUF1027) J4A01_14945 PF04055 Radical SAM superfamily J4A01_14945 PF16881 N-terminal domain of lipoyl synthase of Radical_SAM family J4A01_14950 PF01551 Peptidase family M23 J4A01_14955 PF09560 Sporulation protein YunB (Spo_YunB) J4A01_14960 PF02872 5'-nucleotidase, C-terminal domain J4A01_14965 PF01925 Sulfite exporter TauE/SafE J4A01_14970 PF01904 Protein of unknown function DUF72 J4A01_14980 PF01979 Amidohydrolase family J4A01_14985 PF13556 PucR C-terminal helix-turn-helix domain J4A01_14985 PF07905 Purine catabolism regulatory protein-like family J4A01_14985 PF17853 GGDEF-like domain J4A01_15005 PF07690 Major Facilitator Superfamily J4A01_15010 PF00266 Aminotransferase class-V J4A01_15015 PF01546 Peptidase family M20/M25/M40 J4A01_15020 PF04231 Endonuclease I J4A01_15025 PF00005 ABC transporter J4A01_15025 PF17912 MalK OB fold domain J4A01_15025 PF03459 TOBE domain J4A01_15030 PF00392 Bacterial regulatory proteins, gntR family J4A01_15030 PF07702 UTRA domain J4A01_15035 PF00294 pfkB family carbohydrate kinase J4A01_15040 PF00528 Binding-protein-dependent transport system inner membrane component J4A01_15045 PF00528 Binding-protein-dependent transport system inner membrane component J4A01_15050 PF01547 Bacterial extracellular solute-binding protein J4A01_15055 PF01380 SIS domain J4A01_15060 PF13411 MerR HTH family regulatory protein J4A01_15075 PF17418 Sporulation delaying protein SdpA J4A01_15080 PF07853 Protein of unknown function (DUF1648) J4A01_15085 PF01541 GIY-YIG catalytic domain J4A01_15090 PF01266 FAD dependent oxidoreductase J4A01_15105 PF10903 Protein of unknown function (DUF2691) J4A01_15110 PF01374 Glycosyl hydrolase family 46 J4A01_15115 PF01458 Uncharacterized protein family (UPF0051) J4A01_15120 PF01592 NifU-like N terminal domain J4A01_15125 PF00266 Aminotransferase class-V J4A01_15130 PF01458 Uncharacterized protein family (UPF0051) J4A01_15135 PF00005 ABC transporter J4A01_15145 PF02627 Carboxymuconolactone decarboxylase family J4A01_15150 PF03180 NLPA lipoprotein J4A01_15155 PF00528 Binding-protein-dependent transport system inner membrane component J4A01_15160 PF09383 NIL domain J4A01_15160 PF00005 ABC transporter J4A01_15165 PF02036 SCP-2 sterol transfer family J4A01_15170 PF00085 Thioredoxin J4A01_15175 PF01751 Toprim domain J4A01_15180 PF10830 Protein of unknown function (DUF2553) J4A01_15185 PF01597 Glycine cleavage H-protein J4A01_15190 PF03960 ArsC family J4A01_15195 PF00441 Acyl-CoA dehydrogenase, C-terminal domain J4A01_15195 PF02770 Acyl-CoA dehydrogenase, middle domain J4A01_15195 PF02771 Acyl-CoA dehydrogenase, N-terminal domain J4A01_15200 PF02803 Thiolase, C-terminal domain J4A01_15200 PF00108 Thiolase, N-terminal domain J4A01_15205 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain J4A01_15205 PF00378 Enoyl-CoA hydratase/isomerase J4A01_15205 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain J4A01_15210 PF14115 YuzL-like protein J4A01_15215 PF01619 Proline dehydrogenase J4A01_15225 PF07875 Coat F domain J4A01_15230 PF01047 MarR family J4A01_15235 PF07690 Major Facilitator Superfamily J4A01_15240 PF14552 Tautomerase enzyme J4A01_15250 PF03466 LysR substrate binding domain J4A01_15250 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family J4A01_15260 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family J4A01_15260 PF03466 LysR substrate binding domain J4A01_15265 PF06314 Acetoacetate decarboxylase (ADC) J4A01_15275 PF10835 Protein of unknown function (DUF2573) J4A01_15280 PF00005 ABC transporter J4A01_15285 PF14039 YusW-like protein J4A01_15295 PF00106 short chain dehydrogenase J4A01_15300 PF00210 Ferritin-like domain J4A01_15305 PF13180 PDZ domain J4A01_15310 PF00072 Response regulator receiver domain J4A01_15310 PF00486 Transcriptional regulatory protein, C terminal J4A01_15315 PF00512 His Kinase A (phospho-acceptor) domain J4A01_15315 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase J4A01_15315 PF00672 HAMP domain J4A01_15325 PF00440 Bacterial regulatory proteins, tetR family J4A01_15330 PF10415 Fumarase C C-terminus J4A01_15330 PF00206 Lyase J4A01_15335 PF13113 Protein of unknown function (DUF3970) J4A01_15340 PF03323 Bacillus/Clostridium GerA spore germination protein J4A01_15345 PF03845 Spore germination protein J4A01_15350 PF05504 Spore germination B3/ GerAC like, C-terminal J4A01_15355 PF00196 Bacterial regulatory proteins, luxR family J4A01_15355 PF00072 Response regulator receiver domain J4A01_15360 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase J4A01_15360 PF07730 Histidine kinase J4A01_15360 PF00672 HAMP domain J4A01_15365 PF09922 Cell wall-active antibiotics response 4TMS YvqF J4A01_15370 PF13349 Putative adhesin J4A01_15375 PF04012 PspA/IM30 family J4A01_15385 PF07690 Major Facilitator Superfamily J4A01_15390 PF01923 Cobalamin adenosyltransferase J4A01_15395 PF00005 ABC transporter J4A01_15400 PF01032 FecCD transport family J4A01_15405 PF01497 Periplasmic binding protein J4A01_15410 PF00106 short chain dehydrogenase J4A01_15415 PF08450 SMP-30/Gluconolactonase/LRE-like region J4A01_15420 PF00512 His Kinase A (phospho-acceptor) domain J4A01_15420 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase J4A01_15425 PF00486 Transcriptional regulatory protein, C terminal J4A01_15425 PF00072 Response regulator receiver domain J4A01_15435 PF04545 Sigma-70, region 4 J4A01_15440 PF12841 YvrJ protein family J4A01_15445 PF00190 Cupin J4A01_15450 PF14184 Regulatory protein YrvL J4A01_15455 PF00005 ABC transporter J4A01_15460 PF01032 FecCD transport family J4A01_15465 PF01032 FecCD transport family J4A01_15470 PF01497 Periplasmic binding protein J4A01_15475 PF13520 Amino acid permease J4A01_15480 PF09575 Small spore protein J (Spore_SspJ) J4A01_15485 PF04307 LexA-binding, inner membrane-associated putative hydrolase J4A01_15490 PF00884 Sulfatase J4A01_15495 PF12727 PBP superfamily domain J4A01_15495 PF12728 Helix-turn-helix domain J4A01_15505 PF00528 Binding-protein-dependent transport system inner membrane component J4A01_15510 PF00196 Bacterial regulatory proteins, luxR family J4A01_15510 PF00072 Response regulator receiver domain J4A01_15515 PF00672 HAMP domain J4A01_15515 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase J4A01_15515 PF07730 Histidine kinase J4A01_15515 PF13675 Type IV pili methyl-accepting chemotaxis transducer N-term J4A01_15520 PF00005 ABC transporter J4A01_15535 PF00248 Aldo/keto reductase family J4A01_15545 PF00999 Sodium/hydrogen exchanger family J4A01_15550 PF01077 Nitrite and sulphite reductase 4Fe-4S domain J4A01_15550 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain J4A01_15555 PF00667 FAD binding domain J4A01_15555 PF00258 Flavodoxin J4A01_15555 PF00175 Oxidoreductase NAD-binding domain J4A01_15560 PF13538 UvrD-like helicase C-terminal domain J4A01_15565 PF03458 UPF0126 domain J4A01_15575 PF02600 Disulfide bond formation protein DsbB J4A01_15580 PF13462 Thioredoxin J4A01_15585 PF00403 Heavy-metal-associated domain J4A01_15590 PF00403 Heavy-metal-associated domain J4A01_15595 PF00403 Heavy-metal-associated domain J4A01_15600 PF02583 Metal-sensitive transcriptional repressor J4A01_15605 PF01408 Oxidoreductase family, NAD-binding Rossmann fold J4A01_15605 PF02894 Oxidoreductase family, C-terminal alpha/beta domain J4A01_15610 PF02525 Flavodoxin-like fold J4A01_15615 PF00296 Luciferase-like monooxygenase J4A01_15620 PF00462 Glutaredoxin J4A01_15625 PF00296 Luciferase-like monooxygenase J4A01_15630 PF00005 ABC transporter J4A01_15635 PF00528 Binding-protein-dependent transport system inner membrane component J4A01_15640 PF00528 Binding-protein-dependent transport system inner membrane component J4A01_15645 PF00497 Bacterial extracellular solute-binding proteins, family 3 J4A01_15650 PF00497 Bacterial extracellular solute-binding proteins, family 3 J4A01_15655 PF00583 Acetyltransferase (GNAT) family J4A01_15660 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family J4A01_15660 PF03466 LysR substrate binding domain J4A01_15665 PF00106 short chain dehydrogenase J4A01_15700 PF01668 SmpB protein J4A01_15705 PF17876 Cold shock domain J4A01_15705 PF08206 Ribonuclease B OB domain J4A01_15705 PF00773 RNB domain J4A01_15705 PF00575 S1 RNA binding domain J4A01_15710 PF12146 Serine aminopeptidase, S33 J4A01_15715 PF03840 Preprotein translocase SecG subunit J4A01_15720 PF01381 Helix-turn-helix J4A01_15735 PF01638 HxlR-like helix-turn-helix J4A01_15740 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase J4A01_15740 PF00512 His Kinase A (phospho-acceptor) domain J4A01_15745 PF00072 Response regulator receiver domain J4A01_15745 PF00486 Transcriptional regulatory protein, C terminal J4A01_15760 PF00005 ABC transporter J4A01_15765 PF00528 Binding-protein-dependent transport system inner membrane component J4A01_15770 PF04069 Substrate binding domain of ABC-type glycine betaine transport system J4A01_15775 PF00528 Binding-protein-dependent transport system inner membrane component J4A01_15780 PF00005 ABC transporter J4A01_15780 PF00571 CBS domain J4A01_15785 PF12802 MarR family J4A01_15790 PF00528 Binding-protein-dependent transport system inner membrane component J4A01_15795 PF04069 Substrate binding domain of ABC-type glycine betaine transport system J4A01_15800 PF00528 Binding-protein-dependent transport system inner membrane component J4A01_15805 PF00005 ABC transporter J4A01_15805 PF00571 CBS domain J4A01_15810 PF12802 MarR family J4A01_15815 PF01914 MarC family integral membrane protein J4A01_15825 PF13240 zinc-ribbon domain J4A01_15830 PF00583 Acetyltransferase (GNAT) family J4A01_15845 PF02585 GlcNAc-PI de-N-acetylase J4A01_15860 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family J4A01_15860 PF06988 NifT/FixU protein J4A01_15865 PF01370 NAD dependent epimerase/dehydratase family J4A01_15870 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family J4A01_15875 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain J4A01_15875 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain J4A01_15875 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain J4A01_15880 PF04389 Peptidase family M28 J4A01_15880 PF02225 PA domain J4A01_15885 PF03952 Enolase, N-terminal domain J4A01_15885 PF00113 Enolase, C-terminal TIM barrel domain J4A01_15890 PF06415 BPG-independent PGAM N-terminus (iPGM_N) J4A01_15890 PF01676 Metalloenzyme superfamily J4A01_15895 PF00121 Triosephosphate isomerase J4A01_15900 PF00162 Phosphoglycerate kinase J4A01_15905 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain J4A01_15905 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain J4A01_15910 PF04198 Putative sugar-binding domain J4A01_15915 PF00083 Sugar (and other) transporter J4A01_15920 PF00392 Bacterial regulatory proteins, gntR family J4A01_15925 PF00296 Luciferase-like monooxygenase J4A01_15935 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family J4A01_15935 PF03466 LysR substrate binding domain J4A01_15940 PF00892 EamA-like transporter family J4A01_15945 PF00324 Amino acid permease J4A01_15950 PF00356 Bacterial regulatory proteins, lacI family J4A01_15965 PF01380 SIS domain J4A01_15965 PF01418 Helix-turn-helix domain, rpiR family J4A01_15970 PF00370 FGGY family of carbohydrate kinases, N-terminal domain J4A01_15970 PF02782 FGGY family of carbohydrate kinases, C-terminal domain J4A01_15975 PF02447 GntP family permease J4A01_15995 PF02589 LUD domain J4A01_16000 PF11870 Domain of unknown function (DUF3390) J4A01_16000 PF13183 4Fe-4S dicluster domain J4A01_16000 PF02589 LUD domain J4A01_16005 PF02754 Cysteine-rich domain J4A01_16010 PF00155 Aminotransferase class I and II J4A01_16015 PF00392 Bacterial regulatory proteins, gntR family J4A01_16015 PF07729 FCD domain J4A01_16020 PF02652 L-lactate permease J4A01_16025 PF00309 Sigma-54 factor, Activator interacting domain (AID) J4A01_16025 PF04963 Sigma-54 factor, core binding domain J4A01_16025 PF04552 Sigma-54, DNA binding domain J4A01_16030 PF09628 YvfG protein J4A01_16035 PF04230 Polysaccharide pyruvyl transferase J4A01_16040 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family J4A01_16045 PF17836 PglD N-terminal domain J4A01_16045 PF00132 Bacterial transferase hexapeptide (six repeats) J4A01_16050 PF02397 Bacterial sugar transferase J4A01_16055 PF01943 Polysaccharide biosynthesis protein J4A01_16055 PF14667 Polysaccharide biosynthesis C-terminal domain J4A01_16060 PF00535 Glycosyl transferase family 2 J4A01_16065 PF04230 Polysaccharide pyruvyl transferase J4A01_16070 PF00535 Glycosyl transferase family 2 J4A01_16080 PF13439 Glycosyltransferase Family 4 J4A01_16080 PF00534 Glycosyl transferases group 1 J4A01_16085 PF00535 Glycosyl transferase family 2 J4A01_16090 PF00534 Glycosyl transferases group 1 J4A01_16090 PF13439 Glycosyltransferase Family 4 J4A01_16095 PF02719 Polysaccharide biosynthesis protein J4A01_16100 PF13614 AAA domain J4A01_16105 PF02706 Chain length determinant protein J4A01_16110 PF01381 Helix-turn-helix J4A01_16110 PF08671 Anti-repressor SinI J4A01_16115 PF00135 Carboxylesterase family J4A01_16120 PF01872 RibD C-terminal domain J4A01_16130 PF00583 Acetyltransferase (GNAT) family J4A01_16135 PF05870 Phenolic acid decarboxylase (PAD) J4A01_16180 PF08244 Glycosyl hydrolases family 32 C terminal J4A01_16180 PF00251 Glycosyl hydrolases family 32 N-terminal domain J4A01_16185 PF01306 LacY proton/sugar symporter J4A01_16190 PF00356 Bacterial regulatory proteins, lacI family J4A01_16195 PF00574 Clp protease J4A01_16200 PF13419 Haloacid dehalogenase-like hydrolase J4A01_16205 PF00128 Alpha amylase, catalytic domain J4A01_16205 PF16657 Maltogenic Amylase, C-terminal domain J4A01_16215 PF06691 Protein of unknown function (DUF1189) J4A01_16220 PF00528 Binding-protein-dependent transport system inner membrane component J4A01_16225 PF00528 Binding-protein-dependent transport system inner membrane component J4A01_16230 PF13416 Bacterial extracellular solute-binding protein J4A01_16235 PF00128 Alpha amylase, catalytic domain J4A01_16235 PF02903 Alpha amylase, N-terminal ig-like domain J4A01_16240 PF00356 Bacterial regulatory proteins, lacI family J4A01_16245 PF03641 Possible lysine decarboxylase J4A01_16250 PF03819 MazG nucleotide pyrophosphohydrolase domain J4A01_16255 PF01740 STAS domain J4A01_16255 PF00916 Sulfate permease family J4A01_16260 PF00484 Carbonic anhydrase J4A01_16265 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain J4A01_16265 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain J4A01_16270 PF00545 ribonuclease J4A01_16275 PF00797 N-acetyltransferase J4A01_16280 PF00381 PTS HPr component phosphorylation site J4A01_16285 PF02650 WhiA C-terminal HTH domain J4A01_16285 PF14527 WhiA LAGLIDADG-like domain J4A01_16285 PF10298 WhiA N-terminal LAGLIDADG-like domain J4A01_16290 PF01933 Uncharacterised protein family UPF0052 J4A01_16295 PF03668 P-loop ATPase protein family J4A01_16300 PF00293 NUDIX domain J4A01_16305 PF07992 Pyridine nucleotide-disulphide oxidoreductase J4A01_16310 PF00877 NlpC/P60 family J4A01_16320 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase J4A01_16320 PF18698 Histidine kinase sensor domain J4A01_16320 PF00512 His Kinase A (phospho-acceptor) domain J4A01_16320 PF00672 HAMP domain J4A01_16320 PF00989 PAS fold J4A01_16325 PF00072 Response regulator receiver domain J4A01_16325 PF00486 Transcriptional regulatory protein, C terminal J4A01_16330 PF00664 ABC transporter transmembrane region J4A01_16330 PF00005 ABC transporter J4A01_16335 PF01503 Phosphoribosyl-ATP pyrophosphohydrolase J4A01_16335 PF01502 Phosphoribosyl-AMP cyclohydrolase J4A01_16340 PF00977 Histidine biosynthesis protein J4A01_16345 PF00977 Histidine biosynthesis protein J4A01_16350 PF00117 Glutamine amidotransferase class-I J4A01_16355 PF00475 Imidazoleglycerol-phosphate dehydratase J4A01_16360 PF00815 Histidinol dehydrogenase J4A01_16365 PF01634 ATP phosphoribosyltransferase J4A01_16370 PF13393 Histidyl-tRNA synthetase J4A01_16375 PF13529 Peptidase_C39 like family J4A01_16380 PF14602 Hexapeptide repeat of succinyl-transferase J4A01_16385 PF13419 Haloacid dehalogenase-like hydrolase J4A01_16390 PF01790 Prolipoprotein diacylglyceryl transferase J4A01_16395 PF07475 HPr Serine kinase C-terminal domain J4A01_16395 PF02603 HPr Serine kinase N terminus J4A01_16400 PF01979 Amidohydrolase family J4A01_16405 PF01182 Glucosamine-6-phosphate isomerases/6-phosphogluconolactonase J4A01_16410 PF00392 Bacterial regulatory proteins, gntR family J4A01_16410 PF07702 UTRA domain J4A01_16415 PF00440 Bacterial regulatory proteins, tetR family J4A01_16420 PF00149 Calcineurin-like phosphoesterase J4A01_16425 PF04020 Mycobacterial 4 TMS phage holin, superfamily IV J4A01_16430 PF04024 PspC domain J4A01_16435 PF13349 Putative adhesin J4A01_16450 PF00005 ABC transporter J4A01_16450 PF17755 UvrA DNA-binding domain J4A01_16450 PF17760 UvrA interaction domain J4A01_16455 PF17757 UvrB interaction domain J4A01_16455 PF02151 UvrB/uvrC motif J4A01_16455 PF04851 Type III restriction enzyme, res subunit J4A01_16455 PF00271 Helicase conserved C-terminal domain J4A01_16455 PF12344 Ultra-violet resistance protein B J4A01_16460 PF09964 Uncharacterized protein conserved in bacteria (DUF2198) J4A01_16465 PF00391 PEP-utilising enzyme, mobile domain J4A01_16465 PF01326 Pyruvate phosphate dikinase, PEP/pyruvate binding domain J4A01_16470 PF00440 Bacterial regulatory proteins, tetR family J4A01_16475 PF07690 Major Facilitator Superfamily J4A01_16480 PF00975 Thioesterase domain J4A01_16490 PF17820 PDZ domain J4A01_16495 PF17423 Swarming motility protein J4A01_16500 PF03572 Peptidase family S41 J4A01_16500 PF01471 Putative peptidoglycan binding domain J4A01_16500 PF17820 PDZ domain J4A01_16505 PF13229 Right handed beta helix region J4A01_16510 PF02687 FtsX-like permease family J4A01_16510 PF18075 FtsX extracellular domain J4A01_16515 PF00005 ABC transporter J4A01_16520 PF13442 Cytochrome C oxidase, cbb3-type, subunit III J4A01_16525 PF10035 Uncharacterized protein conserved in bacteria (DUF2179) J4A01_16525 PF02588 Uncharacterised 5xTM membrane BCR, YitT family COG1284 J4A01_16535 PF02810 SEC-C motif J4A01_16535 PF07517 SecA DEAD-like domain J4A01_16535 PF01043 SecA preprotein cross-linking domain J4A01_16535 PF07516 SecA Wing and Scaffold domain J4A01_16540 PF02482 Sigma 54 modulation protein / S30EA ribosomal protein J4A01_16540 PF16321 Sigma 54 modulation/S30EA ribosomal protein C terminus J4A01_16555 PF02561 Flagellar protein FliS J4A01_16560 PF07196 Flagellin hook IN motif J4A01_16560 PF07195 Flagellar hook-associated protein 2 C-terminus J4A01_16560 PF02465 Flagellar hook-associated protein 2 N-terminus J4A01_16565 PF00700 Bacterial flagellin C-terminal helical region J4A01_16565 PF00669 Bacterial flagellin N-terminal helical region J4A01_16570 PF02599 Global regulator protein family J4A01_16575 PF02623 FliW protein J4A01_16585 PF00700 Bacterial flagellin C-terminal helical region J4A01_16585 PF00669 Bacterial flagellin N-terminal helical region J4A01_16590 PF00460 Flagella basal body rod protein J4A01_16590 PF06429 Flagellar basal body rod FlgEFG protein C-terminal J4A01_16595 PF05130 FlgN protein J4A01_16600 PF04316 Anti-sigma-28 factor, FlgM J4A01_16615 PF10719 Late competence development protein ComFB J4A01_16620 PF04851 Type III restriction enzyme, res subunit J4A01_16620 PF00271 Helicase conserved C-terminal domain J4A01_16625 PF02645 Uncharacterised protein, DegV family COG1307 J4A01_16630 PF00072 Response regulator receiver domain J4A01_16630 PF00196 Bacterial regulatory proteins, luxR family J4A01_16635 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase J4A01_16635 PF05384 Sensor protein DegS J4A01_16635 PF07730 Histidine kinase J4A01_16640 PF01205 Uncharacterized protein family UPF0029 J4A01_16640 PF09186 Domain of unknown function (DUF1949) J4A01_16645 PF03816 Cell envelope-related transcriptional attenuator domain J4A01_16650 PF00953 Glycosyl transferase family 4 J4A01_16660 PF00535 Glycosyl transferase family 2 J4A01_16665 PF02706 Chain length determinant protein J4A01_16670 PF04932 O-Antigen ligase J4A01_16675 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain J4A01_16675 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain J4A01_16675 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain J4A01_16680 PF13439 Glycosyltransferase Family 4 J4A01_16680 PF00534 Glycosyl transferases group 1 J4A01_16685 PF01943 Polysaccharide biosynthesis protein J4A01_16685 PF14667 Polysaccharide biosynthesis C-terminal domain J4A01_16690 PF02397 Bacterial sugar transferase J4A01_16695 PF04122 Putative cell wall binding repeat 2 J4A01_16695 PF01520 N-acetylmuramoyl-L-alanine amidase J4A01_16700 PF04122 Putative cell wall binding repeat 2 J4A01_16700 PF08486 Stage II sporulation protein J4A01_16710 PF03816 Cell envelope-related transcriptional attenuator domain J4A01_16715 PF02350 UDP-N-acetylglucosamine 2-epimerase J4A01_16720 PF00483 Nucleotidyl transferase J4A01_16725 PF00005 ABC transporter J4A01_16730 PF01061 ABC-2 type transporter J4A01_16735 PF04464 CDP-Glycerol:Poly(glycerophosphate) glycerophosphotransferase J4A01_16740 PF18674 TarS beta-glycosyltransferase C-terminal domain 1 J4A01_16740 PF00535 Glycosyl transferase family 2 J4A01_16745 PF01467 Cytidylyltransferase-like J4A01_16750 PF03808 Glycosyl transferase WecB/TagA/CpsF family J4A01_16755 PF04464 CDP-Glycerol:Poly(glycerophosphate) glycerophosphotransferase J4A01_16760 PF01832 Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase J4A01_16760 PF08239 Bacterial SH3 domain J4A01_16760 PF05036 Sporulation related domain J4A01_16765 PF01238 Phosphomannose isomerase type I J4A01_16770 PF03323 Bacillus/Clostridium GerA spore germination protein J4A01_16775 PF03845 Spore germination protein J4A01_16780 PF05504 Spore germination B3/ GerAC like, C-terminal J4A01_16790 PF00083 Sugar (and other) transporter J4A01_16795 PF03816 Cell envelope-related transcriptional attenuator domain J4A01_16805 PF04791 LMBR1-like membrane protein J4A01_16810 PF00877 NlpC/P60 family J4A01_16820 PF09587 Bacterial capsule synthesis protein PGA_cap J4A01_16825 PF14102 Capsule biosynthesis CapC J4A01_16830 PF08245 Mur ligase middle domain J4A01_16835 PF03323 Bacillus/Clostridium GerA spore germination protein J4A01_16840 PF03845 Spore germination protein J4A01_16850 PF00356 Bacterial regulatory proteins, lacI family J4A01_16855 PF00294 pfkB family carbohydrate kinase J4A01_16860 PF05025 RbsD / FucU transport protein family J4A01_16865 PF00005 ABC transporter J4A01_16870 PF02653 Branched-chain amino acid transport system / permease component J4A01_16875 PF13407 Periplasmic binding protein domain J4A01_16880 PF08239 Bacterial SH3 domain J4A01_16885 PF02525 Flavodoxin-like fold J4A01_16890 PF03306 Alpha-acetolactate decarboxylase J4A01_16895 PF00205 Thiamine pyrophosphate enzyme, central domain J4A01_16895 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain J4A01_16895 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain J4A01_16900 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family J4A01_16900 PF03466 LysR substrate binding domain J4A01_16905 PF02040 Arsenical pump membrane protein J4A01_16920 PF08757 CotH kinase protein J4A01_16930 PF01613 Flavin reductase like domain J4A01_16945 PF01037 Lrp/AsnC ligand binding domain J4A01_16945 PF13404 AsnC-type helix-turn-helix domain J4A01_16950 PF02417 Chromate transporter J4A01_16955 PF02417 Chromate transporter J4A01_16965 PF03358 NADPH-dependent FMN reductase J4A01_16970 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family J4A01_16970 PF03466 LysR substrate binding domain J4A01_16975 PF04493 Endonuclease V J4A01_16995 PF14431 YwqJ-like deaminase J4A01_16995 PF14449 Pre-toxin TG J4A01_16995 PF04740 LXG domain of WXG superfamily J4A01_17005 PF16888 Domain of unknown function (DUF5082) J4A01_17010 PF09234 Domain of unknown function (DUF1963) J4A01_17015 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain J4A01_17015 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain J4A01_17015 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain J4A01_17025 PF13614 AAA domain J4A01_17030 PF13807 G-rich domain on putative tyrosine kinase J4A01_17030 PF02706 Chain length determinant protein J4A01_17040 PF04434 SWIM zinc finger J4A01_17045 PF12419 SNF2 Helicase protein J4A01_17045 PF00271 Helicase conserved C-terminal domain J4A01_17045 PF00176 SNF2 family N-terminal domain J4A01_17055 PF00455 DeoR C terminal sensor domain J4A01_17055 PF08220 DeoR-like helix-turn-helix domain J4A01_17060 PF00436 Single-strand binding protein family J4A01_17070 PF14183 YwpF-like protein J4A01_17075 PF01741 Large-conductance mechanosensitive channel, MscL J4A01_17080 PF07977 FabA-like domain J4A01_17085 PF18801 response regulator aspartate phosphatase H, N terminal J4A01_17090 PF00460 Flagella basal body rod protein J4A01_17090 PF06429 Flagellar basal body rod FlgEFG protein C-terminal J4A01_17095 PF00460 Flagella basal body rod protein J4A01_17095 PF06429 Flagellar basal body rod FlgEFG protein C-terminal J4A01_17105 PF12116 Stage III sporulation protein D J4A01_17110 PF01047 MarR family J4A01_17115 PF07690 Major Facilitator Superfamily J4A01_17120 PF02133 Permease for cytosine/purines, uracil, thiamine, allantoin J4A01_17125 PF07690 Major Facilitator Superfamily J4A01_17130 PF00857 Isochorismatase family J4A01_17135 PF00909 Ammonium Transporter Family J4A01_17140 PF00543 Nitrogen regulatory protein P-II J4A01_17145 PF01098 Cell cycle protein J4A01_17150 PF01569 PAP2 superfamily J4A01_17155 PF04892 VanZ like family J4A01_17160 PF01551 Peptidase family M23 J4A01_17165 PF00583 Acetyltransferase (GNAT) family J4A01_17170 PF17319 Family of unknown function (DUF5362) J4A01_17175 PF17370 Family of unknown function (DUF5392) J4A01_17180 PF13396 Phospholipase_D-nuclease N-terminal J4A01_17180 PF13091 PLD-like domain J4A01_17185 PF17319 Family of unknown function (DUF5362) J4A01_17190 PF00457 Glycosyl hydrolases family 11 J4A01_17200 PF02082 Transcriptional regulator J4A01_17205 PF00449 Urease alpha-subunit, N-terminal domain J4A01_17205 PF01979 Amidohydrolase family J4A01_17210 PF00699 Urease beta subunit J4A01_17215 PF00547 Urease, gamma subunit J4A01_17220 PF05532 CsbD-like J4A01_17230 PF17874 MalT-like TPR region J4A01_17230 PF18801 response regulator aspartate phosphatase H, N terminal J4A01_17235 PF06463 Molybdenum Cofactor Synthesis C J4A01_17235 PF04055 Radical SAM superfamily J4A01_17240 PF02634 FdhD/NarQ family J4A01_17250 PF00092 von Willebrand factor type A domain J4A01_17255 PF00092 von Willebrand factor type A domain J4A01_17260 PF08486 Stage II sporulation protein J4A01_17265 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) J4A01_17270 PF08680 TATA-box binding J4A01_17275 PF06612 Protein of unknown function (DUF1146) J4A01_17285 PF00401 ATP synthase, Delta/Epsilon chain, long alpha-helix domain J4A01_17285 PF02823 ATP synthase, Delta/Epsilon chain, beta-sandwich domain J4A01_17290 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain J4A01_17290 PF02874 ATP synthase alpha/beta family, beta-barrel domain J4A01_17295 PF00231 ATP synthase J4A01_17300 PF02874 ATP synthase alpha/beta family, beta-barrel domain J4A01_17300 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain J4A01_17300 PF00306 ATP synthase alpha/beta chain, C terminal domain J4A01_17305 PF00213 ATP synthase delta (OSCP) subunit J4A01_17310 PF00430 ATP synthase B/B' CF(0) J4A01_17315 PF00137 ATP synthase subunit C J4A01_17320 PF00119 ATP synthase A chain J4A01_17325 PF03899 ATP synthase I chain J4A01_17335 PF00464 Serine hydroxymethyltransferase J4A01_17340 PF04260 Protein of unknown function (DUF436) J4A01_17345 PF02502 Ribose/Galactose Isomerase J4A01_17350 PF01451 Low molecular weight phosphotyrosine protein phosphatase J4A01_17355 PF02659 Putative manganese efflux pump J4A01_17360 PF03481 Putative GTP-binding controlling metal-binding J4A01_17360 PF01300 Telomere recombination J4A01_17370 PF09551 Stage II sporulation protein R (spore_II_R) J4A01_17375 PF17094 Uncharacterised protein family (UPF0715) J4A01_17385 PF05175 Methyltransferase small domain J4A01_17385 PF17827 PrmC N-terminal domain J4A01_17390 PF03462 PCRF domain J4A01_17390 PF00472 RF-1 domain J4A01_17395 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily J4A01_17400 PF13411 MerR HTH family regulatory protein J4A01_17405 PF03547 Membrane transport protein J4A01_17410 PF00390 Malic enzyme, N-terminal domain J4A01_17410 PF03949 Malic enzyme, NAD binding domain J4A01_17415 PF00265 Thymidine kinase J4A01_17420 PF01197 Ribosomal protein L31 J4A01_17425 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain J4A01_17425 PF07498 Rho termination factor, N-terminal domain J4A01_17425 PF07497 Rho termination factor, RNA-binding domain J4A01_17430 PF03320 Bacterial fructose-1,6-bisphosphatase, glpX-encoded J4A01_17435 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) J4A01_17440 PF00923 Transaldolase/Fructose-6-phosphate aldolase J4A01_17445 PF01116 Fructose-bisphosphate aldolase class-II J4A01_17450 PF00072 Response regulator receiver domain J4A01_17455 PF10740 Domain of unknown function (DUF2529) J4A01_17460 PF06418 CTP synthase N-terminus J4A01_17460 PF00117 Glutamine amidotransferase class-I J4A01_17465 PF05066 HB1, ASXL, restriction endonuclease HTH domain J4A01_17470 PF02754 Cysteine-rich domain J4A01_17470 PF13183 4Fe-4S dicluster domain J4A01_17475 PF13091 PLD-like domain J4A01_17480 PF03851 UV-endonuclease UvdE J4A01_17490 PF00664 ABC transporter transmembrane region J4A01_17490 PF00005 ABC transporter J4A01_17495 PF13091 PLD-like domain J4A01_17495 PF13396 Phospholipase_D-nuclease N-terminal J4A01_17505 PF02665 Nitrate reductase gamma subunit J4A01_17510 PF02613 Nitrate reductase delta subunit J4A01_17515 PF13247 4Fe-4S dicluster domain J4A01_17515 PF14711 Respiratory nitrate reductase beta C-terminal J4A01_17520 PF01568 Molydopterin dinucleotide binding domain J4A01_17520 PF14710 Respiratory nitrate reductase alpha N-terminal J4A01_17520 PF00384 Molybdopterin oxidoreductase J4A01_17535 PF00027 Cyclic nucleotide-binding domain J4A01_17535 PF00325 Bacterial regulatory proteins, crp family J4A01_17540 PF07690 Major Facilitator Superfamily J4A01_17545 PF03485 Arginyl tRNA synthetase N terminal domain J4A01_17545 PF05746 DALR anticodon binding domain J4A01_17545 PF00750 tRNA synthetases class I (R) J4A01_17550 PF09148 Domain of unknown function (DUF1934) J4A01_17570 PF18801 response regulator aspartate phosphatase H, N terminal J4A01_17580 PF00491 Arginase family J4A01_17585 PF17284 Spermidine synthase tetramerisation domain J4A01_17590 PF00905 Penicillin binding protein transpeptidase domain J4A01_17590 PF00912 Transglycosylase J4A01_17600 PF08741 YwhD family J4A01_17605 PF02163 Peptidase family M50 J4A01_17610 PF01361 Tautomerase enzyme J4A01_17615 PF01047 MarR family J4A01_17620 PF13520 Amino acid permease J4A01_17630 PF01966 HD domain J4A01_17635 PF07293 Protein of unknown function (DUF1450) J4A01_17645 PF03551 Transcriptional regulator PadR-like family J4A01_17655 PF00005 ABC transporter J4A01_17660 PF12679 ABC-2 family transporter protein J4A01_17685 PF03099 Biotin/lipoate A/B protein ligase family J4A01_17690 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family J4A01_17690 PF03466 LysR substrate binding domain J4A01_17695 PF03601 Conserved hypothetical protein 698 J4A01_17700 PF01515 Phosphate acetyl/butaryl transferase J4A01_17705 PF06778 Chlorite dismutase J4A01_17715 PF00155 Aminotransferase class I and II J4A01_17720 PF07690 Major Facilitator Superfamily J4A01_17735 PF07883 Cupin domain J4A01_17745 PF07690 Major Facilitator Superfamily J4A01_17750 PF07690 Major Facilitator Superfamily J4A01_17755 PF00324 Amino acid permease J4A01_17760 PF01546 Peptidase family M20/M25/M40 J4A01_17765 PF00171 Aldehyde dehydrogenase family J4A01_17770 PF00208 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase J4A01_17770 PF02812 Glu/Leu/Phe/Val dehydrogenase, dimerisation domain J4A01_17775 PF00512 His Kinase A (phospho-acceptor) domain J4A01_17775 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase J4A01_17780 PF00486 Transcriptional regulatory protein, C terminal J4A01_17780 PF00072 Response regulator receiver domain J4A01_17795 PF00005 ABC transporter J4A01_17800 PF00908 dTDP-4-dehydrorhamnose 3,5-epimerase J4A01_17805 PF04321 RmlD substrate binding domain J4A01_17810 PF16363 GDP-mannose 4,6 dehydratase J4A01_17815 PF00483 Nucleotidyl transferase J4A01_17820 PF04101 Glycosyltransferase family 28 C-terminal domain J4A01_17825 PF02348 Cytidylyltransferase J4A01_17830 PF03102 NeuB family J4A01_17830 PF08666 SAF domain J4A01_17835 PF00583 Acetyltransferase (GNAT) family J4A01_17840 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family J4A01_17845 PF04464 CDP-Glycerol:Poly(glycerophosphate) glycerophosphotransferase J4A01_17850 PF00535 Glycosyl transferase family 2 J4A01_17855 PF09671 Spore coat protein (Spore_GerQ) J4A01_17860 PF04241 Protein of unknown function (DUF423) J4A01_17865 PF00860 Permease family J4A01_17870 PF17261 Family of unknown function (DUF5327) J4A01_17875 PF03167 Uracil DNA glycosylase superfamily J4A01_17880 PF00535 Glycosyl transferase family 2 J4A01_17895 PF03551 Transcriptional regulator PadR-like family J4A01_17900 PF08543 Phosphomethylpyrimidine kinase J4A01_17910 PF08244 Glycosyl hydrolases family 32 C terminal J4A01_17910 PF00251 Glycosyl hydrolases family 32 N-terminal domain J4A01_17915 PF00367 phosphotransferase system, EIIB J4A01_17915 PF02378 Phosphotransferase system, EIIC J4A01_17920 PF03123 CAT RNA binding domain J4A01_17920 PF00874 PRD domain J4A01_17930 PF13860 FlgD Ig-like domain J4A01_17930 PF05922 Peptidase inhibitor I9 J4A01_17930 PF02225 PA domain J4A01_17930 PF00082 Subtilase family J4A01_17935 PF00296 Luciferase-like monooxygenase J4A01_17940 PF00881 Nitroreductase family J4A01_17945 PF01098 Cell cycle protein J4A01_17950 PF00583 Acetyltransferase (GNAT) family J4A01_17955 PF17368 Spore morphogenesis and germination YwcE J4A01_17960 PF03626 Prokaryotic Cytochrome C oxidase subunit IV J4A01_17965 PF00510 Cytochrome c oxidase subunit III J4A01_17970 PF00115 Cytochrome C and Quinol oxidase polypeptide I J4A01_17975 PF00116 Cytochrome C oxidase subunit II, periplasmic domain J4A01_17975 PF02790 Cytochrome C oxidase subunit II, transmembrane domain J4A01_17980 PF04226 Transglycosylase associated protein J4A01_17985 PF02744 Galactose-1-phosphate uridyl transferase, C-terminal domain J4A01_17985 PF01087 Galactose-1-phosphate uridyl transferase, N-terminal domain J4A01_17990 PF10509 Galactokinase galactose-binding signature J4A01_17990 PF00288 GHMP kinases N terminal domain J4A01_17990 PF08544 GHMP kinases C terminal J4A01_17995 PF04138 GtrA-like protein J4A01_18000 PF00440 Bacterial regulatory proteins, tetR family J4A01_18005 PF08671 Anti-repressor SinI J4A01_18020 PF01323 DSBA-like thioredoxin domain J4A01_18025 PF04261 Dyp-type peroxidase family J4A01_18025 PF10518 TAT (twin-arginine translocation) pathway signal sequence J4A01_18035 PF02581 Thiamine monophosphate synthase J4A01_18040 PF02110 Hydroxyethylthiazole kinase family J4A01_18045 PF03466 LysR substrate binding domain J4A01_18045 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family J4A01_18050 PF03788 LrgA family J4A01_18055 PF04172 LrgB-like family J4A01_18060 PF09962 Uncharacterized conserved protein (DUF2196) J4A01_18065 PF13411 MerR HTH family regulatory protein J4A01_18065 PF07739 TipAS antibiotic-recognition domain J4A01_18070 PF10026 Predicted Zn-dependent protease (DUF2268) J4A01_18075 PF10672 S-adenosylmethionine-dependent methyltransferase J4A01_18075 PF17785 PUA-like domain J4A01_18080 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily J4A01_18085 PF02378 Phosphotransferase system, EIIC J4A01_18090 PF00082 Subtilase family J4A01_18095 PF01501 Glycosyl transferase family 8 J4A01_18100 PF04607 Region found in RelA / SpoT proteins J4A01_18105 PF01040 UbiA prenyltransferase family J4A01_18110 PF12459 D-Ala-teichoic acid biosynthesis protein J4A01_18115 PF00501 AMP-binding enzyme J4A01_18115 PF13193 AMP-binding enzyme C-terminal domain J4A01_18120 PF03062 MBOAT, membrane-bound O-acyltransferase family J4A01_18125 PF00550 Phosphopantetheine attachment site J4A01_18130 PF04914 DltD protein J4A01_18135 PF01063 Amino-transferase class IV J4A01_18140 PF02056 Family 4 glycosyl hydrolase J4A01_18140 PF11975 Family 4 glycosyl hydrolase C-terminal domain J4A01_18145 PF02255 PTS system, Lactose/Cellobiose specific IIA subunit J4A01_18150 PF02378 Phosphotransferase system, EIIC J4A01_18155 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit J4A01_18160 PF08279 HTH domain J4A01_18160 PF05043 Mga helix-turn-helix domain J4A01_18160 PF00874 PRD domain J4A01_18160 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 J4A01_18165 PF02245 Methylpurine-DNA glycosylase (MPG) J4A01_18170 PF01032 FecCD transport family J4A01_18175 PF01032 FecCD transport family J4A01_18185 PF01022 Bacterial regulatory protein, arsR family J4A01_18190 PF02040 Arsenical pump membrane protein J4A01_18195 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit J4A01_18200 PF02255 PTS system, Lactose/Cellobiose specific IIA subunit J4A01_18205 PF02378 Phosphotransferase system, EIIC J4A01_18210 PF00232 Glycosyl hydrolase family 1 J4A01_18220 PF01238 Phosphomannose isomerase type I J4A01_18225 PF02156 Glycosyl hydrolase family 26 J4A01_18230 PF00199 Catalase J4A01_18230 PF06628 Catalase-related immune-responsive J4A01_18235 PF02275 Linear amide C-N hydrolases, choloylglycine hydrolase family J4A01_18240 PF02133 Permease for cytosine/purines, uracil, thiamine, allantoin J4A01_18250 PF00005 ABC transporter J4A01_18260 PF04397 LytTr DNA-binding domain J4A01_18260 PF00072 Response regulator receiver domain J4A01_18270 PF00005 ABC transporter J4A01_18280 PF01256 Carbohydrate kinase J4A01_18285 PF00664 ABC transporter transmembrane region J4A01_18285 PF00005 ABC transporter J4A01_18290 PF00005 ABC transporter J4A01_18290 PF00664 ABC transporter transmembrane region J4A01_18295 PF02322 Cytochrome bd terminal oxidase subunit II J4A01_18300 PF01654 Cytochrome bd terminal oxidase subunit I J4A01_18305 PF03390 2-hydroxycarboxylate transporter family J4A01_18310 PF01522 Polysaccharide deacetylase J4A01_18315 PF00005 ABC transporter J4A01_18315 PF17912 MalK OB fold domain J4A01_18315 PF03459 TOBE domain J4A01_18320 PF13556 PucR C-terminal helix-turn-helix domain J4A01_18325 PF02588 Uncharacterised 5xTM membrane BCR, YitT family COG1284 J4A01_18325 PF10035 Uncharacterized protein conserved in bacteria (DUF2179) J4A01_18330 PF11611 Domain of unknown function (DUF4352) J4A01_18335 PF16363 GDP-mannose 4,6 dehydratase J4A01_18340 PF07687 Peptidase dimerisation domain J4A01_18340 PF01546 Peptidase family M20/M25/M40 J4A01_18350 PF04525 LURP-one-related J4A01_18355 PF01717 Cobalamin-independent synthase, Catalytic domain J4A01_18360 PF08241 Methyltransferase domain J4A01_18365 PF07662 Na+ dependent nucleoside transporter C-terminus J4A01_18365 PF01773 Na+ dependent nucleoside transporter N-terminus J4A01_18380 PF00199 Catalase J4A01_18380 PF06628 Catalase-related immune-responsive J4A01_18380 PF18011 C-terminal domain found in long catalases J4A01_18385 PF03600 Citrate transporter J4A01_18390 PF00722 Glycosyl hydrolases family 16 J4A01_18400 PF11700 Vacuole effluxer Atg22 like J4A01_18405 PF00271 Helicase conserved C-terminal domain J4A01_18405 PF00270 DEAD/DEAH box helicase J4A01_18405 PF03880 DbpA RNA binding domain J4A01_18410 PF00544 Pectate lyase J4A01_18415 PF00892 EamA-like transporter family J4A01_18420 PF00582 Universal stress protein family J4A01_18465 PF00145 C-5 cytosine-specific DNA methylase J4A01_18480 PF16369 C-terminal lipocalin-like domain J4A01_18480 PF04616 Glycosyl hydrolases family 43 J4A01_18485 PF09021 HutP J4A01_18490 PF00221 Aromatic amino acid lyase J4A01_18495 PF17391 Urocanase N-terminal domain J4A01_18495 PF17392 Urocanase C-terminal domain J4A01_18495 PF01175 Urocanase Rossmann-like domain J4A01_18500 PF01979 Amidohydrolase family J4A01_18505 PF00491 Arginase family J4A01_18510 PF00324 Amino acid permease J4A01_18515 PF02885 Glycosyl transferase family, helical bundle domain J4A01_18515 PF07831 Pyrimidine nucleoside phosphorylase C-terminal domain J4A01_18515 PF00591 Glycosyl transferase family, a/b domain J4A01_18520 PF07662 Na+ dependent nucleoside transporter C-terminus J4A01_18520 PF01773 Na+ dependent nucleoside transporter N-terminus J4A01_18525 PF01791 DeoC/LacD family aldolase J4A01_18530 PF04198 Putative sugar-binding domain J4A01_18545 PF11631 Protein of unknown function (DUF3255) J4A01_18565 PF01497 Periplasmic binding protein J4A01_18570 PF06486 Protein of unknown function (DUF1093) J4A01_18575 PF02687 FtsX-like permease family J4A01_18580 PF00005 ABC transporter J4A01_18585 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase J4A01_18590 PF00486 Transcriptional regulatory protein, C terminal J4A01_18590 PF00072 Response regulator receiver domain J4A01_18595 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase J4A01_18595 PF00512 His Kinase A (phospho-acceptor) domain J4A01_18600 PF00072 Response regulator receiver domain J4A01_18600 PF00486 Transcriptional regulatory protein, C terminal J4A01_18605 PF00005 ABC transporter J4A01_18620 PF01116 Fructose-bisphosphate aldolase class-II J4A01_18625 PF01261 Xylose isomerase-like TIM barrel J4A01_18630 PF01261 Xylose isomerase-like TIM barrel J4A01_18635 PF02894 Oxidoreductase family, C-terminal alpha/beta domain J4A01_18635 PF01408 Oxidoreductase family, NAD-binding Rossmann fold J4A01_18640 PF07690 Major Facilitator Superfamily J4A01_18645 PF01261 Xylose isomerase-like TIM barrel J4A01_18650 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain J4A01_18650 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain J4A01_18650 PF00205 Thiamine pyrophosphate enzyme, central domain J4A01_18655 PF00294 pfkB family carbohydrate kinase J4A01_18660 PF04962 KduI/IolB family J4A01_18665 PF00171 Aldehyde dehydrogenase family J4A01_18670 PF00455 DeoR C terminal sensor domain J4A01_18670 PF08220 DeoR-like helix-turn-helix domain J4A01_18675 PF00248 Aldo/keto reductase family J4A01_18680 PF00083 Sugar (and other) transporter J4A01_18685 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase J4A01_18685 PF00183 Hsp90 protein J4A01_18695 PF00072 Response regulator receiver domain J4A01_18695 PF00196 Bacterial regulatory proteins, luxR family J4A01_18700 PF07730 Histidine kinase J4A01_18705 PF00487 Fatty acid desaturase J4A01_18710 PF00440 Bacterial regulatory proteins, tetR family J4A01_18715 PF00171 Aldehyde dehydrogenase family J4A01_18720 PF13570 PQQ-like domain J4A01_18720 PF01011 PQQ enzyme repeat J4A01_18720 PF13360 PQQ-like domain J4A01_18725 PF17369 Family of unknown function (DUF5391) J4A01_18735 PF07690 Major Facilitator Superfamily J4A01_18740 PF06271 RDD family J4A01_18750 PF00578 AhpC/TSA family J4A01_18755 PF13192 Thioredoxin domain J4A01_18755 PF07992 Pyridine nucleotide-disulphide oxidoreductase J4A01_18760 PF13784 Fic/DOC family N-terminal J4A01_18760 PF02661 Fic/DOC family J4A01_18765 PF00324 Amino acid permease J4A01_18770 PF06874 Firmicute fructose-1,6-bisphosphatase J4A01_18775 PF01799 [2Fe-2S] binding domain J4A01_18775 PF00111 2Fe-2S iron-sulfur cluster binding domain J4A01_18790 PF12804 MobA-like NTP transferase domain J4A01_18795 PF13478 XdhC Rossmann domain J4A01_18795 PF02625 XdhC and CoxI family J4A01_18830 PF02590 Predicted SPOUT methyltransferase J4A01_18835 PF14116 YyzF-like protein J4A01_18855 PF00248 Aldo/keto reductase family J4A01_18860 PF00583 Acetyltransferase (GNAT) family J4A01_18865 PF18801 response regulator aspartate phosphatase H, N terminal J4A01_18870 PF00491 Arginase family J4A01_18875 PF00324 Amino acid permease J4A01_18880 PF00202 Aminotransferase class-III J4A01_18885 PF07853 Protein of unknown function (DUF1648) J4A01_18885 PF13630 SdpI/YhfL protein family J4A01_18890 PF01022 Bacterial regulatory protein, arsR family J4A01_18895 PF02954 Bacterial regulatory protein, Fis family J4A01_18895 PF13426 PAS domain J4A01_18895 PF00158 Sigma-54 interaction domain J4A01_18905 PF12848 ABC transporter J4A01_18905 PF16326 ABC transporter C-terminal domain J4A01_18905 PF00005 ABC transporter J4A01_18920 PF00899 ThiF family J4A01_18925 PF00672 HAMP domain J4A01_18925 PF00512 His Kinase A (phospho-acceptor) domain J4A01_18925 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase J4A01_18930 PF00072 Response regulator receiver domain J4A01_18930 PF00486 Transcriptional regulatory protein, C terminal J4A01_18935 PF13180 PDZ domain J4A01_18940 PF00753 Metallo-beta-lactamase superfamily J4A01_18945 PF09648 YycH protein J4A01_18950 PF07435 YycH protein J4A01_18955 PF13426 PAS domain J4A01_18955 PF00672 HAMP domain J4A01_18955 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase J4A01_18955 PF00512 His Kinase A (phospho-acceptor) domain J4A01_18960 PF00486 Transcriptional regulatory protein, C terminal J4A01_18960 PF00072 Response regulator receiver domain J4A01_18985 PF00709 Adenylosuccinate synthetase J4A01_18990 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily J4A01_18995 PF03796 DnaB-like helicase C terminal domain J4A01_18995 PF00772 DnaB-like helicase N terminal domain J4A01_19000 PF09954 Uncharacterized protein conserved in bacteria (DUF2188) J4A01_19010 PF14174 YycC-like protein J4A01_19015 PF13231 Dolichyl-phosphate-mannose-protein mannosyltransferase J4A01_19020 PF13439 Glycosyltransferase Family 4 J4A01_19020 PF00534 Glycosyl transferases group 1 J4A01_19030 PF02222 ATP-grasp domain J4A01_19035 PF13439 Glycosyltransferase Family 4 J4A01_19035 PF00534 Glycosyl transferases group 1 J4A01_19050 PF03948 Ribosomal protein L9, C-terminal domain J4A01_19050 PF01281 Ribosomal protein L9, N-terminal domain J4A01_19055 PF02272 DHHA1 domain J4A01_19055 PF01368 DHH family J4A01_19060 PF09991 Predicted membrane protein (DUF2232) J4A01_19070 PF07875 Coat F domain J4A01_19075 PF01638 HxlR-like helix-turn-helix J4A01_19080 PF01368 DHH family J4A01_19080 PF02833 DHHA2 domain J4A01_19085 PF00892 EamA-like transporter family J4A01_19090 PF02435 Levansucrase/Invertase J4A01_19095 PF08244 Glycosyl hydrolases family 32 C terminal J4A01_19095 PF00251 Glycosyl hydrolases family 32 N-terminal domain J4A01_19100 PF07729 FCD domain J4A01_19100 PF00392 Bacterial regulatory proteins, gntR family J4A01_19105 PF05163 DinB family J4A01_19110 PF07690 Major Facilitator Superfamily J4A01_19120 PF00881 Nitroreductase family J4A01_19125 PF01047 MarR family J4A01_19130 PF10035 Uncharacterized protein conserved in bacteria (DUF2179) J4A01_19130 PF02588 Uncharacterised 5xTM membrane BCR, YitT family COG1284 J4A01_19135 PF01047 MarR family J4A01_19140 PF13673 Acetyltransferase (GNAT) domain J4A01_19150 PF02627 Carboxymuconolactone decarboxylase family J4A01_19155 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family J4A01_19155 PF03466 LysR substrate binding domain J4A01_19165 PF00155 Aminotransferase class I and II J4A01_19165 PF00392 Bacterial regulatory proteins, gntR family J4A01_19170 PF00892 EamA-like transporter family J4A01_19175 PF03190 Protein of unknown function, DUF255 J4A01_19200 PF03190 Protein of unknown function, DUF255 J4A01_19205 PF02517 CPBP intramembrane metalloprotease J4A01_19210 PF00083 Sugar (and other) transporter J4A01_19215 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily J4A01_19220 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family J4A01_19220 PF00356 Bacterial regulatory proteins, lacI family J4A01_19225 PF03372 Endonuclease/Exonuclease/phosphatase family J4A01_19230 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain J4A01_19230 PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain J4A01_19235 PF02805 Metal binding domain of Ada J4A01_19235 PF12833 Helix-turn-helix domain J4A01_19240 PF01084 Ribosomal protein S18 J4A01_19245 PF00436 Single-strand binding protein family J4A01_19250 PF01250 Ribosomal protein S6 J4A01_19255 PF06071 Protein of unknown function (DUF933) J4A01_19255 PF01926 50S ribosome-binding GTPase J4A01_19260 PF04879 Molybdopterin oxidoreductase Fe4S4 domain J4A01_19260 PF00384 Molybdopterin oxidoreductase J4A01_19260 PF01568 Molydopterin dinucleotide binding domain J4A01_19265 PF06107 Bacterial protein of unknown function (DUF951) J4A01_19280 PF06866 Protein of unknown function (DUF1256) J4A01_19285 PF17762 HTH domain found in ParB protein J4A01_19285 PF02195 ParB-like nuclease domain J4A01_19290 PF13614 AAA domain J4A01_19295 PF02195 ParB-like nuclease domain J4A01_19295 PF17762 HTH domain found in ParB protein J4A01_19300 PF02527 rRNA small subunit methyltransferase G J4A01_19305 PF01134 Glucose inhibited division protein A J4A01_19305 PF13932 GidA associated domain J4A01_19310 PF01926 50S ribosome-binding GTPase J4A01_19310 PF12631 MnmE helical domain J4A01_19310 PF10396 GTP-binding protein TrmE N-terminus J4A01_19315 PF01424 R3H domain J4A01_19315 PF14804 Jag N-terminus J4A01_19320 PF02096 60Kd inner membrane protein J4A01_19325 PF00825 Ribonuclease P J4A01_19330 PF00468 Ribosomal protein L34