U471_00010 SM00382 ATPases associated with a variety of cellular activities U471_00010 SM00760 Bacterial dnaA protein helix-turn-helix domain U471_00020 SM00480 DNA polymerase III beta subunit U471_00060 SM00387 Histidine kinase-like ATPases U471_00060 SM00433 TopoisomeraseII U471_00070 SM00434 DNA Topoisomerase IV U471_00090 SM00116 Domain in cystathionine beta-synthase and other proteins. U471_00090 SM01240 U471_00090 U471_00100 SM00936 Penicillin-binding protein 5, C-terminal domain U471_00180 SM00257 Lysin motif U471_00180 SM00636 U471_00180 U471_00220 SM00382 ATPases associated with a variety of cellular activities U471_00240 SM00493 U471_00240 U471_00380 SM00465 GIY-YIG type nucleases (URI domain) U471_00400 SM00966 SpoVT / AbrB like domain U471_00430 SM01208 U471_00430 U471_00450 SM00493 U471_00450 U471_00460 SM00650 Ribosomal RNA adenine dimethylases U471_00550 SM01400 U471_00550 U471_00590 SM00487 DEAD-like helicases superfamily U471_00590 SM00490 helicase superfamily c-terminal domain U471_00590 SM00982 U471_00590 U471_00590 SM01058 CarD-like/TRCF domain U471_00600 SM00966 SpoVT / AbrB like domain U471_00630 SM00363 S4 RNA-binding domain U471_00670 SM00316 Ribosomal protein S1-like RNA-binding domain U471_00690 SM00331 Sigma factor PP2C-like phosphatases U471_00690 SM00332 Serine/threonine phosphatases, family 2C, catalytic domain U471_00710 SM00220 Serine/Threonine protein kinases, catalytic domain U471_00720 SM00977 TilS substrate C-terminal domain U471_00740 SM00382 ATPases associated with a variety of cellular activities U471_00840 SM00905 Dihydroneopterin aldolase U471_00860 SM00530 Helix-turn-helix XRE-family like proteins U471_00930 SM00382 ATPases associated with a variety of cellular activities U471_00930 SM01086 C-terminal, D2-small domain, of ClpB protein U471_00940 SM00382 ATPases associated with a variety of cellular activities U471_00960 SM00670 Large family of predicted nucleotide-binding domains U471_01020 SM00840 U471_01020 U471_01030 SM00535 Ribonuclease III family U471_01040 SM00967 RNA 2'-O ribose methyltransferase substrate binding U471_01090 SM00738 In Spt5p, this domain may confer affinity for Spt4p. It possesses a RNP-like fold. U471_01090 SM00739 KOW (Kyprides, Ouzounis, Woese) motif. U471_01100 SM00649 Ribosomal protein L11/L12 U471_01160 SM00663 RNA polymerase I subunit A N-terminus U471_01190 SM00838 Elongation factor G C-terminus U471_01190 SM00889 Elongation factor G, domain IV U471_01260 SM01382 U471_01260 U471_01260 SM01383 U471_01260 U471_01300 SM00739 KOW (Kyprides, Ouzounis, Woese) motif. U471_01410 SM00316 Ribosomal protein S1-like RNA-binding domain U471_01440 SM00662 RNA polymerases D U471_01450 SM00382 ATPases associated with a variety of cellular activities U471_01460 SM00382 ATPases associated with a variety of cellular activities U471_01530 SM00646 U471_01530 U471_01560 SM01251 U471_01560 U471_01610 SM00829 Enoylreductase U471_01680 SM00342 helix_turn_helix, arabinose operon control protein U471_01840 SM00382 ATPases associated with a variety of cellular activities U471_01880 SM00448 cheY-homologous receiver domain U471_01880 SM00862 Transcriptional regulatory protein, C terminal U471_01890 SM00387 Histidine kinase-like ATPases U471_01900 SM00382 ATPases associated with a variety of cellular activities U471_01970 SM00347 helix_turn_helix multiple antibiotic resistance protein U471_02010 SM00421 helix_turn_helix, Lux Regulon U471_02010 SM00448 cheY-homologous receiver domain U471_02020 SM00382 ATPases associated with a variety of cellular activities U471_02210 SM00530 Helix-turn-helix XRE-family like proteins U471_02300 SM00450 Rhodanese Homology Domain U471_02370 SM00387 Histidine kinase-like ATPases U471_02380 SM00448 cheY-homologous receiver domain U471_02590 SM00870 U471_02590 U471_02670 SM00028 Tetratricopeptide repeats U471_02690 SM00642 Alpha-amylase domain U471_02710 SM00382 ATPases associated with a variety of cellular activities U471_02810 SM00116 Domain in cystathionine beta-synthase and other proteins. U471_02810 SM00382 ATPases associated with a variety of cellular activities U471_02870 SM00632 U471_02870 U471_02870 SM00642 Alpha-amylase domain U471_02910 SM00347 helix_turn_helix multiple antibiotic resistance protein U471_03120 SM00926 Molybdopterin oxidoreductase Fe4S4 domain U471_03150 SM00833 Cobalamin synthesis protein cobW C-terminal domain U471_03230 SM00934 Orotidine 5'-phosphate decarboxylase / HUMPS family U471_03260 SM00823 Phosphopantetheine attachment site U471_03270 SM00823 Phosphopantetheine attachment site U471_03280 SM00823 Phosphopantetheine attachment site U471_03340 SM00345 helix_turn_helix gluconate operon transcriptional repressor U471_03370 SM00382 ATPases associated with a variety of cellular activities U471_03390 SM00062 Bacterial periplasmic substrate-binding proteins U471_03460 SM00710 Parallel beta-helix repeats U471_03460 SM00722 Domain present in carbohydrate binding proteins and sugar hydrolses U471_03540 SM00062 Bacterial periplasmic substrate-binding proteins U471_03560 SM00382 ATPases associated with a variety of cellular activities U471_03590 SM00382 ATPases associated with a variety of cellular activities U471_03620 SM00448 cheY-homologous receiver domain U471_03620 SM00862 Transcriptional regulatory protein, C terminal U471_03630 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain U471_03630 SM00387 Histidine kinase-like ATPases U471_03630 SM00388 His Kinase A (phosphoacceptor) domain U471_03650 SM00028 Tetratricopeptide repeats U471_03720 SM00382 ATPases associated with a variety of cellular activities U471_03780 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor U471_03790 SM00345 helix_turn_helix gluconate operon transcriptional repressor U471_03870 SM00420 helix_turn_helix, Deoxyribose operon repressor U471_03990 SM00796 Allophanate hydrolase subunit 1 U471_04000 SM00797 Allophanate hydrolase subunit 2 U471_04010 SM00346 helix_turn_helix isocitrate lyase regulation U471_04170 SM00344 helix_turn_helix ASNC type U471_04180 SM00436 Bacterial DNA topoisomeraes I ATP-binding domain U471_04180 SM00437 Bacterial DNA topoisomerase I DNA-binding domain U471_04180 SM00493 U471_04180 U471_04200 SM00267 diguanylate cyclase U471_04310 SM00028 Tetratricopeptide repeats U471_04510 SM00091 PAS domain U471_04510 SM00387 Histidine kinase-like ATPases U471_04520 SM00448 cheY-homologous receiver domain U471_04550 SM00382 ATPases associated with a variety of cellular activities U471_04670 SM00487 DEAD-like helicases superfamily U471_04670 SM00490 helicase superfamily c-terminal domain U471_04730 SM01005 Alanine racemase, C-terminal domain U471_04780 SM00387 Histidine kinase-like ATPases U471_04790 SM00331 Sigma factor PP2C-like phosphatases U471_04830 SM00331 Sigma factor PP2C-like phosphatases U471_04830 SM00332 Serine/threonine phosphatases, family 2C, catalytic domain U471_04840 SM00316 Ribosomal protein S1-like RNA-binding domain U471_04840 SM00732 Likely ribonuclease with RNase H fold. U471_04860 SM00731 SprT homologues. U471_05020 SM00829 Enoylreductase U471_05030 SM00829 Enoylreductase U471_05060 SM00357 Cold shock protein domain U471_05070 SM01058 CarD-like/TRCF domain U471_05100 SM00450 Rhodanese Homology Domain U471_05110 SM00450 Rhodanese Homology Domain U471_05120 SM00450 Rhodanese Homology Domain U471_05120 SM00849 Metallo-beta-lactamase superfamily U471_05190 SM00347 helix_turn_helix multiple antibiotic resistance protein U471_05330 SM01130 U471_05330 U471_05450 SM00829 Enoylreductase U471_05460 SM00422 helix_turn_helix, mercury resistance U471_05490 SM00345 helix_turn_helix gluconate operon transcriptional repressor U471_05530 SM00448 cheY-homologous receiver domain U471_05530 SM00862 Transcriptional regulatory protein, C terminal U471_05540 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain U471_05540 SM00387 Histidine kinase-like ATPases U471_05540 SM00388 His Kinase A (phosphoacceptor) domain U471_05600 SM00345 helix_turn_helix gluconate operon transcriptional repressor U471_05670 SM00387 Histidine kinase-like ATPases U471_05680 SM00421 helix_turn_helix, Lux Regulon U471_05680 SM00448 cheY-homologous receiver domain U471_05710 SM00382 ATPases associated with a variety of cellular activities U471_05760 SM00825 Beta-ketoacyl synthase U471_05770 SM00530 Helix-turn-helix XRE-family like proteins U471_05800 SM00422 helix_turn_helix, mercury resistance U471_05860 SM00345 helix_turn_helix gluconate operon transcriptional repressor U471_05860 SM00895 U471_05860 U471_05960 SM00345 helix_turn_helix gluconate operon transcriptional repressor U471_05960 SM00866 U471_05960 U471_05970 SM00345 helix_turn_helix gluconate operon transcriptional repressor U471_05970 SM00895 U471_05970 U471_06050 SM00829 Enoylreductase U471_06120 SM00382 ATPases associated with a variety of cellular activities U471_06140 SM00881 CoA binding domain U471_06190 SM00883 Chaperonin 10 Kd subunit U471_06240 SM00028 Tetratricopeptide repeats U471_06240 SM00382 ATPases associated with a variety of cellular activities U471_06250 SM00829 Enoylreductase U471_06370 SM00829 Enoylreductase U471_06470 SM00460 Transglutaminase/protease-like homologues U471_06560 SM01001 AIR carboxylase U471_06580 SM00998 Adenylosuccinate lyase C-terminus U471_06610 SM01211 U471_06610 U471_06660 SM00798 AICARFT/IMPCHase bienzyme U471_06660 SM00851 MGS-like domain U471_06670 SM01209 U471_06670 U471_06670 SM01210 U471_06670 U471_06760 SM00278 Helix-hairpin-helix DNA-binding motif class 1 U471_06760 SM00292 breast cancer carboxy-terminal domain U471_06760 SM00532 Ligase N family U471_06830 SM00845 GatB domain U471_06860 SM00046 Diacylglycerol kinase catalytic domain (presumed) U471_06910 SM00487 DEAD-like helicases superfamily U471_07130 SM00347 helix_turn_helix multiple antibiotic resistance protein U471_07190 SM00382 ATPases associated with a variety of cellular activities U471_07390 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). U471_07420 SM00382 ATPases associated with a variety of cellular activities U471_07430 SM00422 helix_turn_helix, mercury resistance U471_07450 SM00382 ATPases associated with a variety of cellular activities U471_07460 SM00487 DEAD-like helicases superfamily U471_07460 SM00490 helicase superfamily c-terminal domain U471_07490 SM00829 Enoylreductase U471_07520 SM00656 U471_07520 U471_07610 SM00387 Histidine kinase-like ATPases U471_07620 SM00448 cheY-homologous receiver domain U471_07650 SM00849 Metallo-beta-lactamase superfamily U471_07810 SM00642 Alpha-amylase domain U471_07820 SM00345 helix_turn_helix gluconate operon transcriptional repressor U471_07820 SM00866 U471_07820 U471_07880 SM00354 helix_turn _helix lactose operon repressor U471_07940 SM00226 Low molecular weight phosphatase family U471_08080 SM00478 endonuclease III U471_08150 SM00861 Transketolase, pyrimidine binding domain U471_08180 SM00382 ATPases associated with a variety of cellular activities U471_08260 SM00382 ATPases associated with a variety of cellular activities U471_08270 SM00382 ATPases associated with a variety of cellular activities U471_08400 SM00347 helix_turn_helix multiple antibiotic resistance protein U471_08540 SM00287 Bacterial SH3 domain homologues U471_08620 SM00478 endonuclease III U471_08620 SM00525 U471_08620 U471_08690 SM00382 ATPases associated with a variety of cellular activities U471_08830 SM01060 U471_08830 U471_08860 SM00382 ATPases associated with a variety of cellular activities U471_08880 SM00062 Bacterial periplasmic substrate-binding proteins U471_08940 SM00530 Helix-turn-helix XRE-family like proteins U471_08960 SM00567 E-Z type HEAT repeats U471_09030 SM00763 PrkA AAA domain U471_09070 SM00347 helix_turn_helix multiple antibiotic resistance protein U471_09130 SM00345 helix_turn_helix gluconate operon transcriptional repressor U471_09140 SM00382 ATPases associated with a variety of cellular activities U471_09150 SM00382 ATPases associated with a variety of cellular activities U471_09180 SM00357 Cold shock protein domain U471_09200 SM00267 diguanylate cyclase U471_09310 SM00116 Domain in cystathionine beta-synthase and other proteins. U471_09400 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. U471_09400 SM00387 Histidine kinase-like ATPases U471_09410 SM00421 helix_turn_helix, Lux Regulon U471_09410 SM00448 cheY-homologous receiver domain U471_09450 SM00257 Lysin motif U471_09490 SM00098 Alkaline phosphatase homologues U471_09500 SM00257 Lysin motif U471_09600 SM00563 Phosphate acyltransferases U471_09610 SM01091 Transporter associated domain U471_09640 SM00825 Beta-ketoacyl synthase U471_09660 SM01091 Transporter associated domain U471_09800 SM00382 ATPases associated with a variety of cellular activities U471_09810 SM00382 ATPases associated with a variety of cellular activities U471_09930 SM00729 Elongator protein 3, MiaB family, Radical SAM U471_10020 SM00382 ATPases associated with a variety of cellular activities U471_10060 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. U471_10140 SM00347 helix_turn_helix multiple antibiotic resistance protein U471_10200 SM00382 ATPases associated with a variety of cellular activities U471_10370 SM00849 Metallo-beta-lactamase superfamily U471_10460 SM00855 Phosphoglycerate mutase family U471_10500 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). U471_10530 SM00914 U471_10530 U471_10590 SM00894 Excalibur calcium-binding domain U471_10670 SM00347 helix_turn_helix multiple antibiotic resistance protein U471_10910 SM00342 helix_turn_helix, arabinose operon control protein U471_10980 SM00316 Ribosomal protein S1-like RNA-binding domain U471_11000 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). U471_11000 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain U471_11140 SM00859 Semialdehyde dehydrogenase, NAD binding domain U471_11180 SM01097 Carbamoyl-phosphate synthase small chain, CPSase domain U471_11190 SM01096 Carbamoyl-phosphate synthetase large chain, oligomerisation domain U471_11300 SM00825 Beta-ketoacyl synthase U471_11320 SM00382 ATPases associated with a variety of cellular activities U471_11330 SM00382 ATPases associated with a variety of cellular activities U471_11430 SM00382 ATPases associated with a variety of cellular activities U471_11440 SM00382 ATPases associated with a variety of cellular activities U471_11560 SM01118 U471_11560 U471_11580 SM00954 Region found in RelA / SpoT proteins U471_11840 SM00849 Metallo-beta-lactamase superfamily U471_11860 SM00382 ATPases associated with a variety of cellular activities U471_11870 SM00966 SpoVT / AbrB like domain U471_12120 SM00347 helix_turn_helix multiple antibiotic resistance protein U471_12200 SM00420 helix_turn_helix, Deoxyribose operon repressor U471_12200 SM01134 U471_12200 U471_12220 SM00612 U471_12220 U471_12280 SM00926 Molybdopterin oxidoreductase Fe4S4 domain U471_12280 SM00929 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region U471_12350 SM00382 ATPases associated with a variety of cellular activities U471_12440 SM00354 helix_turn _helix lactose operon repressor U471_12460 SM00858 U471_12460 U471_12490 SM00028 Tetratricopeptide repeats U471_12510 SM00257 Lysin motif U471_12510 SM00644 U471_12510 U471_12560 SM00530 Helix-turn-helix XRE-family like proteins U471_12600 SM00382 ATPases associated with a variety of cellular activities U471_12730 SM00257 Lysin motif U471_12730 SM00644 U471_12730 U471_12870 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. U471_12940 SM00382 ATPases associated with a variety of cellular activities U471_12970 SM00922 Mandelate racemase / muconate lactonizing enzyme, C-terminal domain U471_12990 SM00382 ATPases associated with a variety of cellular activities U471_13080 SM00359 Putative RNA-binding Domain in PseudoUridine synthase and Archaeosine transglycosylase U471_13110 SM00347 helix_turn_helix multiple antibiotic resistance protein U471_13160 SM00028 Tetratricopeptide repeats U471_13190 SM00100 Cyclic nucleotide-monophosphate binding domain U471_13250 SM00382 ATPases associated with a variety of cellular activities U471_13290 SM00257 Lysin motif U471_13290 SM00636 U471_13290 U471_13310 SM00116 Domain in cystathionine beta-synthase and other proteins. U471_13310 SM00924 MgtE intracellular N domain U471_13320 SM00422 helix_turn_helix, mercury resistance U471_13350 SM00347 helix_turn_helix multiple antibiotic resistance protein U471_13380 SM00559 Ku70 and Ku80 are 70kDa and 80kDa subunits of the Lupus Ku autoantigen U471_13530 SM00091 PAS domain U471_13530 SM00387 Histidine kinase-like ATPases U471_13530 SM00388 His Kinase A (phosphoacceptor) domain U471_13620 SM01007 Class II Aldolase and Adducin N-terminal domain U471_13650 SM00387 Histidine kinase-like ATPases U471_13650 SM00388 His Kinase A (phosphoacceptor) domain U471_13660 SM00347 helix_turn_helix multiple antibiotic resistance protein U471_13700 SM00382 ATPases associated with a variety of cellular activities U471_13700 SM01086 C-terminal, D2-small domain, of ClpB protein U471_13800 SM00822 U471_13800 U471_13920 SM00354 helix_turn _helix lactose operon repressor U471_13930 SM01061 CAT RNA binding domain U471_14000 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). U471_14000 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain U471_14040 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) U471_14040 SM00091 PAS domain U471_14040 SM00387 Histidine kinase-like ATPases U471_14040 SM00388 His Kinase A (phosphoacceptor) domain U471_14070 SM00260 Two component signalling adaptor domain U471_14070 SM00448 cheY-homologous receiver domain U471_14100 SM00257 Lysin motif U471_14140 SM00052 Putative diguanylate phosphodiesterase U471_14330 SM00852 Probable molybdopterin binding domain U471_14400 SM00382 ATPases associated with a variety of cellular activities U471_14420 SM00420 helix_turn_helix, Deoxyribose operon repressor U471_14420 SM01134 U471_14420 U471_14470 SM00382 ATPases associated with a variety of cellular activities U471_14530 SM00966 SpoVT / AbrB like domain U471_14540 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) U471_14540 SM00091 PAS domain U471_14540 SM00387 Histidine kinase-like ATPases U471_14540 SM00388 His Kinase A (phosphoacceptor) domain U471_14580 SM00849 Metallo-beta-lactamase superfamily U471_14660 SM00827 Acyl transferase domain in polyketide synthase (PKS) enzymes. U471_14670 SM00822 U471_14670 U471_14670 SM00823 Phosphopantetheine attachment site U471_14670 SM00825 Beta-ketoacyl synthase U471_14670 SM00826 U471_14670 U471_14670 SM01294 U471_14670 U471_14680 SM00822 U471_14680 U471_14680 SM00823 Phosphopantetheine attachment site U471_14680 SM00825 Beta-ketoacyl synthase U471_14680 SM00826 U471_14680 U471_14690 SM00822 U471_14690 U471_14690 SM00823 Phosphopantetheine attachment site U471_14690 SM00825 Beta-ketoacyl synthase U471_14690 SM01294 U471_14690 U471_14700 SM00822 U471_14700 U471_14700 SM00823 Phosphopantetheine attachment site U471_14700 SM00825 Beta-ketoacyl synthase U471_14700 SM01294 U471_14700 U471_14710 SM00822 U471_14710 U471_14710 SM00823 Phosphopantetheine attachment site U471_14710 SM00825 Beta-ketoacyl synthase U471_14710 SM01294 U471_14710 U471_14720 SM00822 U471_14720 U471_14720 SM00823 Phosphopantetheine attachment site U471_14720 SM00825 Beta-ketoacyl synthase U471_14720 SM01294 U471_14720 U471_14730 SM00822 U471_14730 U471_14730 SM00823 Phosphopantetheine attachment site U471_14730 SM01294 U471_14730 U471_14760 SM00861 Transketolase, pyrimidine binding domain U471_14970 SM00838 Elongation factor G C-terminus U471_15010 SM00670 Large family of predicted nucleotide-binding domains U471_15060 SM00878 Biotin carboxylase C-terminal domain U471_15160 SM00116 Domain in cystathionine beta-synthase and other proteins. U471_15380 SM00740 U471_15380 U471_15390 SM00740 U471_15390 U471_15480 SM00842 Cell division protein FtsA U471_15490 SM00864 Tubulin/FtsZ family, GTPase domain U471_15490 SM00865 Tubulin/FtsZ family, C-terminal domain U471_15540 SM00382 ATPases associated with a variety of cellular activities U471_15620 SM00363 S4 RNA-binding domain U471_15670 SM00363 S4 RNA-binding domain U471_15720 SM01097 Carbamoyl-phosphate synthase small chain, CPSase domain U471_15730 SM00851 MGS-like domain U471_15730 SM01096 Carbamoyl-phosphate synthetase large chain, oligomerisation domain U471_15730 SM01209 U471_15730 U471_15760 SM00934 Orotidine 5'-phosphate decarboxylase / HUMPS family U471_15880 SM00831 Cation transporter/ATPase, N-terminus U471_15910 SM00072 Guanylate kinase homologues. U471_15920 SM01409 U471_15920 U471_15940 SM00487 DEAD-like helicases superfamily U471_15940 SM00490 helicase superfamily c-terminal domain U471_15990 SM00331 Sigma factor PP2C-like phosphatases U471_15990 SM00332 Serine/threonine phosphatases, family 2C, catalytic domain U471_16000 SM00220 Serine/Threonine protein kinases, catalytic domain U471_16000 SM00740 U471_16000 U471_16030 SM00983 Thiamin pyrophosphokinase, vitamin B1 binding domain U471_16070 SM01120 U471_16070 U471_16070 SM01121 U471_16070 U471_16100 SM00487 DEAD-like helicases superfamily U471_16100 SM00490 helicase superfamily c-terminal domain U471_16130 SM00827 Acyl transferase domain in polyketide synthase (PKS) enzymes. U471_16140 SM00822 U471_16140 U471_16160 SM00358 Double-stranded RNA binding motif U471_16160 SM00535 Ribonuclease III family U471_16170 SM00968 SMC proteins Flexible Hinge Domain U471_16180 SM00382 ATPases associated with a variety of cellular activities U471_16180 SM00962 SRP54-type protein, GTPase domain U471_16180 SM00963 SRP54-type protein, helical bundle domain U471_16210 SM00382 ATPases associated with a variety of cellular activities U471_16210 SM00962 SRP54-type protein, GTPase domain U471_16210 SM00963 SRP54-type protein, helical bundle domain U471_16330 SM00881 CoA binding domain U471_16360 SM00436 Bacterial DNA topoisomeraes I ATP-binding domain U471_16360 SM00437 Bacterial DNA topoisomerase I DNA-binding domain U471_16360 SM00493 U471_16360 U471_16400 SM00382 ATPases associated with a variety of cellular activities U471_16400 SM01086 C-terminal, D2-small domain, of ClpB protein U471_16480 SM00382 ATPases associated with a variety of cellular activities U471_16580 SM00448 cheY-homologous receiver domain U471_16650 SM00962 SRP54-type protein, GTPase domain U471_16670 SM00448 cheY-homologous receiver domain U471_16680 SM00073 Histidine Phosphotransfer domain U471_16680 SM00260 Two component signalling adaptor domain U471_16680 SM00387 Histidine kinase-like ATPases U471_16680 SM01231 U471_16680 U471_16690 SM00260 Two component signalling adaptor domain U471_16810 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. U471_16830 SM00479 U471_16830 U471_16830 SM00481 DNA polymerase alpha chain like domain U471_16850 SM00316 Ribosomal protein S1-like RNA-binding domain U471_16850 SM00322 K homology RNA-binding domain U471_16920 SM00904 Riboflavin kinase U471_16930 SM00316 Ribosomal protein S1-like RNA-binding domain U471_16930 SM00322 K homology RNA-binding domain U471_16990 SM00859 Semialdehyde dehydrogenase, NAD binding domain U471_17010 SM01130 U471_17010 U471_17020 SM00849 Metallo-beta-lactamase superfamily U471_17050 SM00382 ATPases associated with a variety of cellular activities U471_17050 SM00843 U471_17050 U471_17060 SM00345 helix_turn_helix gluconate operon transcriptional repressor U471_17060 SM00866 U471_17060 U471_17080 SM00347 helix_turn_helix multiple antibiotic resistance protein U471_17150 SM00530 Helix-turn-helix XRE-family like proteins U471_17170 SM00852 Probable molybdopterin binding domain U471_17180 SM00382 ATPases associated with a variety of cellular activities U471_17210 SM00322 K homology RNA-binding domain U471_17210 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. U471_17240 SM00829 Enoylreductase U471_17260 SM00729 Elongator protein 3, MiaB family, Radical SAM U471_17290 SM00533 DNA-binding domain of DNA mismatch repair MUTS family U471_17290 SM00534 ATPase domain of DNA mismatch repair MUTS family U471_17300 SM00853 MutL C terminal dimerisation domain U471_17300 SM01340 U471_17300 U471_17320 SM00849 Metallo-beta-lactamase superfamily U471_17330 SM00827 Acyl transferase domain in polyketide synthase (PKS) enzymes. U471_17340 SM00827 Acyl transferase domain in polyketide synthase (PKS) enzymes. U471_17350 SM00827 Acyl transferase domain in polyketide synthase (PKS) enzymes. U471_17400 SM00822 U471_17400 U471_17400 SM00823 Phosphopantetheine attachment site U471_17400 SM00825 Beta-ketoacyl synthase U471_17400 SM00826 U471_17400 U471_17400 SM01294 U471_17400 U471_17410 SM00822 U471_17410 U471_17410 SM00823 Phosphopantetheine attachment site U471_17410 SM00825 Beta-ketoacyl synthase U471_17410 SM00826 U471_17410 U471_17410 SM01294 U471_17410 U471_17420 SM00822 U471_17420 U471_17420 SM00823 Phosphopantetheine attachment site U471_17420 SM00825 Beta-ketoacyl synthase U471_17420 SM00826 U471_17420 U471_17420 SM01294 U471_17420 U471_17430 SM00822 U471_17430 U471_17430 SM00823 Phosphopantetheine attachment site U471_17430 SM00825 Beta-ketoacyl synthase U471_17430 SM00826 U471_17430 U471_17430 SM01294 U471_17430 U471_17440 SM00823 Phosphopantetheine attachment site U471_17440 SM00825 Beta-ketoacyl synthase U471_17440 SM01294 U471_17440 U471_17680 SM00646 U471_17680 U471_17700 SM00382 ATPases associated with a variety of cellular activities U471_17730 SM00422 helix_turn_helix, mercury resistance U471_17740 SM01230 U471_17740 U471_17890 SM00829 Enoylreductase U471_18070 SM00710 Parallel beta-helix repeats U471_18160 SM00257 Lysin motif U471_18170 SM00857 Resolvase, N terminal domain U471_18200 SM00861 Transketolase, pyrimidine binding domain U471_18250 SM00448 cheY-homologous receiver domain U471_18410 SM01207 U471_18410 U471_18420 SM00881 CoA binding domain U471_18430 SM00387 Histidine kinase-like ATPases U471_18430 SM00433 TopoisomeraseII U471_18440 SM00434 DNA Topoisomerase IV U471_18490 SM00829 Enoylreductase U471_18530 SM00354 helix_turn _helix lactose operon repressor U471_18630 SM01067 Cellulose binding domain U471_18650 SM00387 Histidine kinase-like ATPases U471_18650 SM00388 His Kinase A (phosphoacceptor) domain U471_18660 SM00448 cheY-homologous receiver domain U471_18660 SM00862 Transcriptional regulatory protein, C terminal U471_18680 SM00606 Cellulose Binding Domain Type IV U471_18690 SM00823 Phosphopantetheine attachment site U471_18690 SM00824 Thioesterase U471_18700 SM00823 Phosphopantetheine attachment site U471_18710 SM00823 Phosphopantetheine attachment site U471_18710 SM00825 Beta-ketoacyl synthase U471_18720 SM00827 Acyl transferase domain in polyketide synthase (PKS) enzymes. U471_18750 SM00822 U471_18750 U471_18760 SM00882 Coenzyme A transferase U471_18770 SM00882 Coenzyme A transferase U471_18800 SM00729 Elongator protein 3, MiaB family, Radical SAM U471_18800 SM00876 Biotin and Thiamin Synthesis associated domain U471_18920 SM00878 Biotin carboxylase C-terminal domain U471_18970 SM00824 Thioesterase U471_18980 SM00823 Phosphopantetheine attachment site U471_18990 SM00823 Phosphopantetheine attachment site U471_19000 SM00823 Phosphopantetheine attachment site U471_19000 SM01294 U471_19000 U471_19010 SM00823 Phosphopantetheine attachment site U471_19100 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor U471_19130 SM00829 Enoylreductase U471_19180 SM00359 Putative RNA-binding Domain in PseudoUridine synthase and Archaeosine transglycosylase U471_19220 SM00342 helix_turn_helix, arabinose operon control protein U471_19230 SM00822 U471_19230 U471_19290 SM00926 Molybdopterin oxidoreductase Fe4S4 domain U471_19340 SM00860 SMI1 / KNR4 family U471_19380 SM00342 helix_turn_helix, arabinose operon control protein U471_19400 SM00849 Metallo-beta-lactamase superfamily U471_19420 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor U471_19510 SM00257 Lysin motif U471_19530 SM00341 Helicase and RNase D C-terminal U471_19530 SM00487 DEAD-like helicases superfamily U471_19530 SM00490 helicase superfamily c-terminal domain U471_19530 SM00956 U471_19530 U471_19700 SM00849 Metallo-beta-lactamase superfamily U471_19720 SM00861 Transketolase, pyrimidine binding domain U471_19730 SM00327 von Willebrand factor (vWF) type A domain U471_19740 SM00382 ATPases associated with a variety of cellular activities U471_19760 SM00257 Lysin motif U471_19990 SM00345 helix_turn_helix gluconate operon transcriptional repressor U471_19990 SM00866 U471_19990 U471_20000 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. U471_20000 SM00245 tail specific protease U471_20070 SM00014 Acid phosphatase homologues U471_20180 SM00882 Coenzyme A transferase U471_20190 SM00882 Coenzyme A transferase U471_20340 SM00028 Tetratricopeptide repeats U471_20360 SM00450 Rhodanese Homology Domain U471_20360 SM00849 Metallo-beta-lactamase superfamily U471_20380 SM00421 helix_turn_helix, Lux Regulon U471_20380 SM00448 cheY-homologous receiver domain U471_20390 SM00387 Histidine kinase-like ATPases U471_20420 SM00860 SMI1 / KNR4 family U471_20440 SM00857 Resolvase, N terminal domain U471_20480 SM00347 helix_turn_helix multiple antibiotic resistance protein U471_20630 SM00567 E-Z type HEAT repeats U471_20630 SM00932 Scaffold protein Nfu/NifU N terminal U471_20640 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. U471_20690 SM00357 Cold shock protein domain U471_20770 SM00279 Helix-hairpin-helix class 2 (Pol1 family) motifs U471_20770 SM00475 5'-3' exonuclease U471_20930 SM00491 U471_20930 U471_20970 SM00981 U471_20970 U471_21010 SM00487 DEAD-like helicases superfamily U471_21010 SM00490 helicase superfamily c-terminal domain U471_21110 SM00060 Fibronectin type 3 domain U471_21130 SM00478 endonuclease III U471_21130 SM00525 U471_21130 U471_21200 SM00479 U471_21200 U471_21200 SM00487 DEAD-like helicases superfamily U471_21200 SM00491 U471_21200 U471_21280 SM00851 MGS-like domain U471_21320 SM00835 Cupin U471_21390 SM00914 U471_21390 U471_21400 SM00028 Tetratricopeptide repeats U471_21540 SM00138 Methyltransferase, chemotaxis proteins U471_21550 SM00562 U471_21550 U471_21610 SM00411 bacterial (prokaryotic) histone like domain U471_21720 SM00316 Ribosomal protein S1-like RNA-binding domain U471_21810 SM00839 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase U471_21850 SM00257 Lysin motif U471_21870 SM00487 DEAD-like helicases superfamily U471_21870 SM00490 helicase superfamily c-terminal domain U471_21950 SM00091 PAS domain U471_21950 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain U471_21950 SM00387 Histidine kinase-like ATPases U471_21950 SM00388 His Kinase A (phosphoacceptor) domain U471_21960 SM00448 cheY-homologous receiver domain U471_21960 SM00862 Transcriptional regulatory protein, C terminal U471_22000 SM00363 S4 RNA-binding domain U471_22290 SM00387 Histidine kinase-like ATPases U471_22310 SM00936 Penicillin-binding protein 5, C-terminal domain U471_22400 SM00919 Malic enzyme, NAD binding domain U471_22400 SM01274 U471_22400 U471_22430 SM00870 U471_22430 U471_22440 SM00530 Helix-turn-helix XRE-family like proteins U471_22650 SM00849 Metallo-beta-lactamase superfamily U471_22700 SM00823 Phosphopantetheine attachment site U471_22700 SM00825 Beta-ketoacyl synthase U471_22700 SM00829 Enoylreductase U471_22700 SM01294 U471_22700 U471_22710 SM00822 U471_22710 U471_22710 SM00823 Phosphopantetheine attachment site U471_22710 SM00825 Beta-ketoacyl synthase U471_22710 SM00826 U471_22710 U471_22720 SM00822 U471_22720 U471_22720 SM00823 Phosphopantetheine attachment site U471_22720 SM00825 Beta-ketoacyl synthase U471_22720 SM01294 U471_22720 U471_22730 SM00822 U471_22730 U471_22730 SM00823 Phosphopantetheine attachment site U471_22730 SM00825 Beta-ketoacyl synthase U471_22730 SM00826 U471_22730 U471_22730 SM01294 U471_22730 U471_22740 SM00822 U471_22740 U471_22740 SM00823 Phosphopantetheine attachment site U471_22740 SM00825 Beta-ketoacyl synthase U471_22740 SM00826 U471_22740 U471_22740 SM01294 U471_22740 U471_22750 SM00822 U471_22750 U471_22750 SM00823 Phosphopantetheine attachment site U471_22750 SM00825 Beta-ketoacyl synthase U471_22750 SM01294 U471_22750 U471_22760 SM00822 U471_22760 U471_22760 SM00823 Phosphopantetheine attachment site U471_22760 SM00825 Beta-ketoacyl synthase U471_22760 SM00826 U471_22760 U471_22760 SM01294 U471_22760 U471_22770 SM00822 U471_22770 U471_22810 SM00827 Acyl transferase domain in polyketide synthase (PKS) enzymes. U471_22820 SM00738 In Spt5p, this domain may confer affinity for Spt4p. It possesses a RNP-like fold. U471_22920 SM01350 U471_22920 U471_23010 SM00382 ATPases associated with a variety of cellular activities U471_23030 SM00062 Bacterial periplasmic substrate-binding proteins U471_23030 SM00079 Eukaryotic homologues of bacterial periplasmic substrate binding proteins. U471_23050 SM00046 Diacylglycerol kinase catalytic domain (presumed) U471_23070 SM00861 Transketolase, pyrimidine binding domain U471_23110 SM00839 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase U471_23130 SM00091 PAS domain U471_23130 SM00382 ATPases associated with a variety of cellular activities U471_23220 SM00646 U471_23220 U471_23260 SM00530 Helix-turn-helix XRE-family like proteins U471_23310 SM01005 Alanine racemase, C-terminal domain U471_23330 SM00448 cheY-homologous receiver domain U471_23340 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. U471_23370 SM00363 S4 RNA-binding domain U471_23380 SM00861 Transketolase, pyrimidine binding domain U471_23460 SM00878 Biotin carboxylase C-terminal domain U471_23550 SM00382 ATPases associated with a variety of cellular activities U471_23570 SM00841 Elongation factor P, C-terminal U471_23570 SM01185 U471_23570 U471_23630 SM00529 Helix-turn-helix diphteria tox regulatory element U471_23650 SM00450 Rhodanese Homology Domain U471_23690 SM00487 DEAD-like helicases superfamily U471_23690 SM00490 helicase superfamily c-terminal domain U471_23720 SM00530 Helix-turn-helix XRE-family like proteins U471_23860 SM00382 ATPases associated with a variety of cellular activities U471_23880 SM01091 Transporter associated domain U471_23920 SM00849 Metallo-beta-lactamase superfamily U471_23960 SM00631 U471_23960 U471_24070 SM00382 ATPases associated with a variety of cellular activities U471_24080 SM00382 ATPases associated with a variety of cellular activities U471_24180 SM00257 Lysin motif U471_24250 SM00518 AP endonuclease family 2 U471_24260 SM00487 DEAD-like helicases superfamily U471_24260 SM00490 helicase superfamily c-terminal domain U471_24340 SM00400 zinc finger U471_24340 SM00493 U471_24340 U471_24370 SM00116 Domain in cystathionine beta-synthase and other proteins. U471_24460 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. U471_24550 SM00729 Elongator protein 3, MiaB family, Radical SAM U471_24580 SM00271 DnaJ molecular chaperone homology domain U471_24620 SM00729 Elongator protein 3, MiaB family, Radical SAM U471_24630 SM00838 Elongation factor G C-terminus U471_24700 SM00849 Metallo-beta-lactamase superfamily U471_24720 SM00278 Helix-hairpin-helix DNA-binding motif class 1 U471_24760 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. U471_24780 SM01103 U471_24780 U471_24940 SM00388 His Kinase A (phosphoacceptor) domain U471_24950 SM00448 cheY-homologous receiver domain U471_24950 SM00862 Transcriptional regulatory protein, C terminal U471_25110 SM00849 Metallo-beta-lactamase superfamily U471_25240 SM00926 Molybdopterin oxidoreductase Fe4S4 domain U471_25240 SM00929 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region U471_25410 SM00732 Likely ribonuclease with RNase H fold. U471_25430 SM00863 Threonyl and Alanyl tRNA synthetase second additional domain U471_25450 SM00382 ATPases associated with a variety of cellular activities U471_25460 SM00062 Bacterial periplasmic substrate-binding proteins U471_25460 SM00079 Eukaryotic homologues of bacterial periplasmic substrate binding proteins. U471_25520 SM00382 ATPases associated with a variety of cellular activities U471_25530 SM00028 Tetratricopeptide repeats U471_25570 SM00382 ATPases associated with a variety of cellular activities U471_25640 SM00287 Bacterial SH3 domain homologues U471_25640 SM00646 U471_25640 U471_25660 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. U471_25660 SM00954 Region found in RelA / SpoT proteins U471_25760 SM01323 U471_25760 U471_25800 SM00382 ATPases associated with a variety of cellular activities U471_25810 SM00278 Helix-hairpin-helix DNA-binding motif class 1 U471_25850 SM00257 Lysin motif U471_25940 SM01317 U471_25940 U471_26130 SM00257 Lysin motif U471_26150 SM01004 Delta-aminolevulinic acid dehydratase U471_26220 SM00382 ATPases associated with a variety of cellular activities U471_26220 SM00464 Found in ATP-dependent protease La (LON) U471_26230 SM00382 ATPases associated with a variety of cellular activities U471_26240 SM00382 ATPases associated with a variety of cellular activities U471_26240 SM00994 ClpX C4-type zinc finger U471_26240 SM01086 C-terminal, D2-small domain, of ClpB protein U471_26300 SM01329 U471_26300 U471_26310 SM00917 LeuA allosteric (dimerisation) domain U471_26420 SM00909 Sporulation and spore germination U471_26440 SM00347 helix_turn_helix multiple antibiotic resistance protein U471_26450 SM00421 helix_turn_helix, Lux Regulon U471_26520 SM00465 GIY-YIG type nucleases (URI domain) U471_26550 SM00813 Alpha-L-arabinofuranosidase C-terminus U471_26560 SM00893 Electron transfer flavoprotein domain U471_26570 SM00893 Electron transfer flavoprotein domain U471_26630 SM00463 Small MutS-related domain U471_26630 SM00533 DNA-binding domain of DNA mismatch repair MUTS family U471_26630 SM00534 ATPase domain of DNA mismatch repair MUTS family U471_26640 SM00278 Helix-hairpin-helix DNA-binding motif class 1 U471_26640 SM00481 DNA polymerase alpha chain like domain U471_26640 SM00483 DNA polymerase X family U471_26680 SM00873 B3/4 domain U471_26680 SM00874 tRNA synthetase B5 domain U471_26680 SM00896 Ferredoxin-fold anticodon binding domain U471_26710 SM00967 RNA 2'-O ribose methyltransferase substrate binding U471_26780 SM00813 Alpha-L-arabinofuranosidase C-terminus U471_26840 SM01007 Class II Aldolase and Adducin N-terminal domain U471_26960 SM00448 cheY-homologous receiver domain U471_26960 SM00850 LytTr DNA-binding domain U471_26980 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. U471_26980 SM00387 Histidine kinase-like ATPases U471_27000 SM00863 Threonyl and Alanyl tRNA synthetase second additional domain U471_27030 SM00382 ATPases associated with a variety of cellular activities U471_27080 SM00846 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain U471_27150 SM00898 Formamidopyrimidine-DNA glycosylase N-terminal domain U471_27150 SM01232 U471_27150 U471_27160 SM00279 Helix-hairpin-helix class 2 (Pol1 family) motifs U471_27160 SM00474 3'-5' exonuclease U471_27160 SM00475 5'-3' exonuclease U471_27160 SM00482 DNA polymerase A domain U471_27180 SM00091 PAS domain U471_27180 SM00387 Histidine kinase-like ATPases U471_27180 SM00388 His Kinase A (phosphoacceptor) domain U471_27190 SM00448 cheY-homologous receiver domain U471_27190 SM00862 Transcriptional regulatory protein, C terminal U471_27210 SM01329 U471_27210 U471_27320 SM00919 Malic enzyme, NAD binding domain U471_27320 SM01274 U471_27320 U471_27330 SM00481 DNA polymerase alpha chain like domain U471_27390 SM00116 Domain in cystathionine beta-synthase and other proteins. U471_27400 SM00849 Metallo-beta-lactamase superfamily U471_27450 SM00852 Probable molybdopterin binding domain U471_27570 SM00981 U471_27570 U471_27650 SM00267 diguanylate cyclase U471_27670 SM00363 S4 RNA-binding domain U471_27670 SM01390 U471_27670 U471_27690 SM00860 SMI1 / KNR4 family U471_27900 SM00363 S4 RNA-binding domain U471_27940 SM00116 Domain in cystathionine beta-synthase and other proteins. U471_27980 SM00354 helix_turn _helix lactose operon repressor U471_27990 SM00830 Chorismate mutase type II U471_28050 SM00382 ATPases associated with a variety of cellular activities U471_28050 SM00843 U471_28050 U471_28120 SM00919 Malic enzyme, NAD binding domain U471_28120 SM01274 U471_28120 U471_28130 SM00849 Metallo-beta-lactamase superfamily U471_28170 SM00046 Diacylglycerol kinase catalytic domain (presumed) U471_28240 SM00382 ATPases associated with a variety of cellular activities U471_28260 SM00363 S4 RNA-binding domain U471_28340 SM00354 helix_turn _helix lactose operon repressor U471_28410 SM00450 Rhodanese Homology Domain U471_28450 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) U471_28450 SM00091 PAS domain U471_28500 SM00382 ATPases associated with a variety of cellular activities U471_28510 SM00387 Histidine kinase-like ATPases U471_28520 SM00448 cheY-homologous receiver domain U471_28520 SM00862 Transcriptional regulatory protein, C terminal U471_28540 SM00382 ATPases associated with a variety of cellular activities U471_28580 SM00382 ATPases associated with a variety of cellular activities U471_28590 SM00345 helix_turn_helix gluconate operon transcriptional repressor U471_28630 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor U471_28640 SM00825 Beta-ketoacyl synthase U471_28640 SM00849 Metallo-beta-lactamase superfamily U471_28690 SM00729 Elongator protein 3, MiaB family, Radical SAM U471_28830 SM00382 ATPases associated with a variety of cellular activities U471_28910 SM01234 U471_28910 U471_28920 SM00947 Carbonic anhydrase U471_28980 SM00922 Mandelate racemase / muconate lactonizing enzyme, C-terminal domain U471_29080 SM00244 prohibitin homologues U471_29180 SM00047 Lysozyme subfamily 2 U471_29200 SM00835 Cupin U471_29260 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). U471_29260 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain U471_29260 SM00319 Homologues of the ligand binding domain of Tar U471_29270 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). U471_29270 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain U471_29270 SM00319 Homologues of the ligand binding domain of Tar U471_29280 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). U471_29280 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain U471_29280 SM00319 Homologues of the ligand binding domain of Tar U471_29290 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). U471_29290 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain U471_29290 SM00319 Homologues of the ligand binding domain of Tar U471_29340 SM00642 Alpha-amylase domain U471_29350 SM01091 Transporter associated domain U471_29490 SM00316 Ribosomal protein S1-like RNA-binding domain U471_29510 SM00344 helix_turn_helix ASNC type U471_29550 SM00387 Histidine kinase-like ATPases U471_29550 SM00388 His Kinase A (phosphoacceptor) domain U471_29560 SM01298 U471_29560 U471_29570 SM00479 U471_29570 U471_29620 SM00091 PAS domain U471_29620 SM00387 Histidine kinase-like ATPases U471_29630 SM00448 cheY-homologous receiver domain U471_29670 SM00382 ATPases associated with a variety of cellular activities U471_29790 SM00421 helix_turn_helix, Lux Regulon U471_29790 SM00448 cheY-homologous receiver domain U471_29800 SM00387 Histidine kinase-like ATPases U471_29860 SM00052 Putative diguanylate phosphodiesterase U471_29940 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. U471_30040 SM01002 Alanine dehydrogenase/PNT, C-terminal domain U471_30040 SM01003 Alanine dehydrogenase/PNT, N-terminal domain U471_30060 SM00923 MbtH-like protein U471_30070 SM00823 Phosphopantetheine attachment site U471_30070 SM00824 Thioesterase U471_30110 SM00822 U471_30110 U471_30260 SM01240 U471_30260 U471_30290 SM00382 ATPases associated with a variety of cellular activities U471_30520 SM00729 Elongator protein 3, MiaB family, Radical SAM U471_30680 SM00382 ATPases associated with a variety of cellular activities U471_30690 SM00345 helix_turn_helix gluconate operon transcriptional repressor U471_30690 SM00866 U471_30690 U471_30750 SM00422 helix_turn_helix, mercury resistance U471_30780 SM00465 GIY-YIG type nucleases (URI domain) U471_30870 SM00382 ATPases associated with a variety of cellular activities U471_30930 SM00382 ATPases associated with a variety of cellular activities U471_30930 SM00930 U471_30930 U471_30960 SM00493 U471_30960 U471_31070 SM00347 helix_turn_helix multiple antibiotic resistance protein U471_31100 SM00822 U471_31100 U471_31170 SM00382 ATPases associated with a variety of cellular activities U471_31200 SM00822 U471_31200 U471_31220 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. U471_31240 SM00448 cheY-homologous receiver domain U471_31240 SM00862 Transcriptional regulatory protein, C terminal U471_31250 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain U471_31250 SM00387 Histidine kinase-like ATPases U471_31250 SM00388 His Kinase A (phosphoacceptor) domain U471_31330 SM00421 helix_turn_helix, Lux Regulon U471_31330 SM00448 cheY-homologous receiver domain U471_31340 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain U471_31340 SM00387 Histidine kinase-like ATPases U471_31410 SM00382 ATPases associated with a variety of cellular activities U471_31460 SM00387 Histidine kinase-like ATPases U471_31460 SM00388 His Kinase A (phosphoacceptor) domain U471_31470 SM00448 cheY-homologous receiver domain U471_31470 SM00862 Transcriptional regulatory protein, C terminal U471_31530 SM00835 Cupin U471_31550 SM00382 ATPases associated with a variety of cellular activities U471_31670 SM00421 helix_turn_helix, Lux Regulon U471_31670 SM00448 cheY-homologous receiver domain U471_31690 SM00382 ATPases associated with a variety of cellular activities U471_31880 SM00530 Helix-turn-helix XRE-family like proteins U471_31950 SM00382 ATPases associated with a variety of cellular activities U471_31980 SM00062 Bacterial periplasmic substrate-binding proteins U471_31990 SM00062 Bacterial periplasmic substrate-binding proteins U471_32050 SM00316 Ribosomal protein S1-like RNA-binding domain U471_32050 SM00357 Cold shock protein domain U471_32050 SM00955 U471_32050 U471_32080 SM00530 Helix-turn-helix XRE-family like proteins U471_32090 SM00530 Helix-turn-helix XRE-family like proteins U471_32100 SM00530 Helix-turn-helix XRE-family like proteins U471_32120 SM00387 Histidine kinase-like ATPases U471_32120 SM00388 His Kinase A (phosphoacceptor) domain U471_32130 SM00448 cheY-homologous receiver domain U471_32130 SM00862 Transcriptional regulatory protein, C terminal U471_32160 SM00382 ATPases associated with a variety of cellular activities U471_32200 SM00116 Domain in cystathionine beta-synthase and other proteins. U471_32200 SM00382 ATPases associated with a variety of cellular activities U471_32250 SM00116 Domain in cystathionine beta-synthase and other proteins. U471_32250 SM00382 ATPases associated with a variety of cellular activities U471_32410 SM00984 UDP binding domain U471_32430 SM01192 U471_32430 U471_32430 SM01193 U471_32430 U471_32480 SM00846 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain U471_32520 SM00345 helix_turn_helix gluconate operon transcriptional repressor U471_32590 SM00354 helix_turn _helix lactose operon repressor U471_32690 SM00345 helix_turn_helix gluconate operon transcriptional repressor U471_32690 SM00895 U471_32690 U471_32880 SM00530 Helix-turn-helix XRE-family like proteins U471_33030 SM00640 Glycosyl hydrolases family 32 U471_33050 SM00354 helix_turn _helix lactose operon repressor U471_33150 SM00947 Carbonic anhydrase U471_33290 SM00028 Tetratricopeptide repeats U471_33300 SM00387 Histidine kinase-like ATPases U471_33300 SM00388 His Kinase A (phosphoacceptor) domain U471_33310 SM00448 cheY-homologous receiver domain U471_33310 SM00862 Transcriptional regulatory protein, C terminal U471_33320 SM00382 ATPases associated with a variety of cellular activities U471_33490 SM00345 helix_turn_helix gluconate operon transcriptional repressor U471_33490 SM00866 U471_33490 U471_33570 SM00382 ATPases associated with a variety of cellular activities U471_33580 SM00487 DEAD-like helicases superfamily U471_33580 SM00490 helicase superfamily c-terminal domain U471_33630 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. U471_33650 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. U471_33650 SM00245 tail specific protease U471_33660 SM00710 Parallel beta-helix repeats U471_33680 SM00382 ATPases associated with a variety of cellular activities U471_33710 SM00937 U471_33710 U471_33720 SM00957 SecA DEAD-like domain U471_33720 SM00958 SecA preprotein cross-linking domain U471_33890 SM00487 DEAD-like helicases superfamily U471_33890 SM00490 helicase superfamily c-terminal domain U471_33910 SM00421 helix_turn_helix, Lux Regulon U471_33910 SM00448 cheY-homologous receiver domain U471_33920 SM00387 Histidine kinase-like ATPases U471_34000 SM00984 UDP binding domain U471_34040 SM00646 U471_34040 U471_34100 SM00382 ATPases associated with a variety of cellular activities U471_34170 SM00047 Lysozyme subfamily 2 U471_34170 SM00287 Bacterial SH3 domain homologues U471_34330 SM00854 Bacterial capsule synthesis protein PGA_cap U471_34420 SM00354 helix_turn _helix lactose operon repressor U471_34450 SM00382 ATPases associated with a variety of cellular activities U471_34480 SM00287 Bacterial SH3 domain homologues U471_34590 SM00903 Flavin reductase like domain U471_34620 SM00344 helix_turn_helix ASNC type U471_34790 SM00984 UDP binding domain U471_34870 SM00487 DEAD-like helicases superfamily U471_34870 SM00490 helicase superfamily c-terminal domain U471_34890 SM00420 helix_turn_helix, Deoxyribose operon repressor U471_34890 SM01134 U471_34890 U471_34950 SM00028 Tetratricopeptide repeats U471_35010 SM00347 helix_turn_helix multiple antibiotic resistance protein U471_35080 SM00938 Nitrogen regulatory protein P-II U471_35100 SM00014 Acid phosphatase homologues U471_35170 SM00155 Phospholipase D. Active site motifs. U471_35250 SM00028 Tetratricopeptide repeats U471_35260 SM00729 Elongator protein 3, MiaB family, Radical SAM U471_35290 SM00327 von Willebrand factor (vWF) type A domain U471_35320 SM00327 von Willebrand factor (vWF) type A domain U471_35400 SM00382 ATPases associated with a variety of cellular activities U471_35530 SM00226 Low molecular weight phosphatase family U471_35620 SM00937 U471_35620 U471_35660 SM00919 Malic enzyme, NAD binding domain U471_35660 SM01274 U471_35660 U471_35680 SM00357 Cold shock protein domain U471_35680 SM00382 ATPases associated with a variety of cellular activities U471_35680 SM00959 Rho termination factor, N-terminal domain U471_35740 SM00448 cheY-homologous receiver domain U471_35790 SM00155 Phospholipase D. Active site motifs. U471_35820 SM00382 ATPases associated with a variety of cellular activities U471_35830 SM00155 Phospholipase D. Active site motifs. U471_35880 SM00926 Molybdopterin oxidoreductase Fe4S4 domain U471_35910 SM00100 Cyclic nucleotide-monophosphate binding domain U471_35910 SM00419 helix_turn_helix, cAMP Regulatory protein U471_35930 SM00836 DALR anticodon binding domain U471_35930 SM01016 Arginyl tRNA synthetase N terminal dom U471_35970 SM00028 Tetratricopeptide repeats U471_35990 SM00530 Helix-turn-helix XRE-family like proteins U471_36110 SM00347 helix_turn_helix multiple antibiotic resistance protein U471_36150 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. U471_36210 SM00382 ATPases associated with a variety of cellular activities U471_36450 SM00839 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase U471_36470 SM00387 Histidine kinase-like ATPases U471_36470 SM00388 His Kinase A (phosphoacceptor) domain U471_36480 SM00448 cheY-homologous receiver domain U471_36480 SM00862 Transcriptional regulatory protein, C terminal U471_36510 SM00382 ATPases associated with a variety of cellular activities U471_36580 SM00858 U471_36580 U471_36670 SM00986 Uracil DNA glycosylase superfamily U471_36670 SM00987 UreE urease accessory protein, C-terminal domain U471_36740 SM00640 Glycosyl hydrolases family 32 U471_36760 SM01061 CAT RNA binding domain U471_37060 SM00422 helix_turn_helix, mercury resistance U471_37080 SM00359 Putative RNA-binding Domain in PseudoUridine synthase and Archaeosine transglycosylase U471_37150 SM00954 Region found in RelA / SpoT proteins U471_37340 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor U471_37430 SM01060 U471_37430 U471_37480 SM00382 ATPases associated with a variety of cellular activities U471_37490 SM00382 ATPases associated with a variety of cellular activities U471_37560 SM00382 ATPases associated with a variety of cellular activities U471_37760 SM01060 U471_37760 U471_37790 SM01061 CAT RNA binding domain U471_37810 SM00487 DEAD-like helicases superfamily U471_37810 SM00490 helicase superfamily c-terminal domain U471_37900 SM00656 U471_37900 U471_37960 SM00487 DEAD-like helicases superfamily U471_37960 SM00490 helicase superfamily c-terminal domain U471_38050 SM00941 Pyrimidine nucleoside phosphorylase C-terminal domain U471_38070 SM01133 U471_38070 U471_38200 SM00382 ATPases associated with a variety of cellular activities U471_38210 SM00387 Histidine kinase-like ATPases U471_38220 SM00448 cheY-homologous receiver domain U471_38220 SM00862 Transcriptional regulatory protein, C terminal U471_38230 SM00387 Histidine kinase-like ATPases U471_38230 SM00388 His Kinase A (phosphoacceptor) domain U471_38240 SM00448 cheY-homologous receiver domain U471_38240 SM00862 Transcriptional regulatory protein, C terminal U471_38250 SM00382 ATPases associated with a variety of cellular activities U471_38380 SM00420 helix_turn_helix, Deoxyribose operon repressor U471_38380 SM01134 U471_38380 U471_38410 SM00387 Histidine kinase-like ATPases U471_38440 SM00421 helix_turn_helix, Lux Regulon U471_38440 SM00448 cheY-homologous receiver domain U471_38500 SM00564 beta-propeller repeat U471_38620 SM01092 CO dehydrogenase flavoprotein C-terminal domain U471_38630 SM01008 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain U471_38810 SM00028 Tetratricopeptide repeats U471_38850 SM00382 ATPases associated with a variety of cellular activities U471_38860 SM00558 A domain family that is part of the cupin metalloenzyme superfamily. U471_38870 SM00382 ATPases associated with a variety of cellular activities U471_38910 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain U471_38910 SM00387 Histidine kinase-like ATPases U471_38910 SM00388 His Kinase A (phosphoacceptor) domain U471_38940 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. U471_38950 SM00849 Metallo-beta-lactamase superfamily U471_38980 SM00091 PAS domain U471_38980 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain U471_38980 SM00387 Histidine kinase-like ATPases U471_38980 SM00388 His Kinase A (phosphoacceptor) domain U471_38990 SM00448 cheY-homologous receiver domain U471_38990 SM00862 Transcriptional regulatory protein, C terminal U471_39010 SM00788 Adenylosuccinate synthetase U471_39030 SM00382 ATPases associated with a variety of cellular activities U471_39150 SM00267 diguanylate cyclase U471_39200 SM01131 U471_39200 U471_39230 SM00640 Glycosyl hydrolases family 32 U471_39240 SM00345 helix_turn_helix gluconate operon transcriptional repressor U471_39240 SM00895 U471_39240 U471_39350 SM00347 helix_turn_helix multiple antibiotic resistance protein U471_39370 SM00347 helix_turn_helix multiple antibiotic resistance protein U471_39520 SM00354 helix_turn _helix lactose operon repressor U471_39550 SM00342 helix_turn_helix, arabinose operon control protein U471_39590 SM00926 Molybdopterin oxidoreductase Fe4S4 domain U471_39640 SM00470 ParB-like nuclease domain U471_39660 SM00470 ParB-like nuclease domain U471_39680 SM01228 U471_39680 U471_39700 SM00393 Putative single-stranded nucleic acids-binding domain U471_39700 SM01245 U471_39700