locus-tag class description BAMF_0001 PF11638 DnaA N-terminal domain BAMF_0001 PF08299 Bacterial dnaA protein helix-turn-helix BAMF_0001 PF00308 Bacterial dnaA protein BAMF_0002 PF02768 DNA polymerase III beta subunit, C-terminal domain BAMF_0002 PF02767 DNA polymerase III beta subunit, central domain BAMF_0002 PF00712 DNA polymerase III beta subunit, N-terminal domain BAMF_0004 PF02463 RecF/RecN/SMC N terminal domain BAMF_0005 PF04025 Domain of unknown function (DUF370) BAMF_0006 PF00204 DNA gyrase B BAMF_0006 PF00986 DNA gyrase B subunit, carboxyl terminus BAMF_0006 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BAMF_0006 PF01751 Toprim domain BAMF_0007 PF00521 DNA gyrase/topoisomerase IV, subunit A BAMF_0007 PF03989 DNA gyrase C-terminal domain, beta-propeller BAMF_0008 PF14175 YaaC-like Protein BAMF_0009 PF00478 IMP dehydrogenase / GMP reductase domain BAMF_0009 PF00571 CBS domain BAMF_0010 PF00768 D-alanyl-D-alanine carboxypeptidase BAMF_0010 PF07943 Penicillin-binding protein 5, C-terminal domain BAMF_0011 PF01680 SOR/SNZ family BAMF_0012 PF01174 SNO glutamine amidotransferase family BAMF_0013 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) BAMF_0013 PF02403 Seryl-tRNA synthetase N-terminal domain BAMF_0014 PF02595 Glycerate kinase family BAMF_0015 PF01712 Deoxynucleoside kinase BAMF_0016 PF01712 Deoxynucleoside kinase BAMF_0017 PF01476 LysM domain BAMF_0017 PF00704 Glycosyl hydrolases family 18 BAMF_0018 PF00857 Isochorismatase family BAMF_0019 PF14437 MafB19-like deaminase BAMF_0020 PF12169 DNA polymerase III subunits gamma and tau domain III BAMF_0021 PF02575 YbaB/EbfC DNA-binding family BAMF_0022 PF13662 Toprim domain BAMF_0022 PF02132 RecR protein BAMF_0023 PF10704 Protein of unknown function (DUF2508) BAMF_0024 PF07441 SigmaK-factor processing regulatory protein BofA BAMF_0025 PF10112 5-bromo-4-chloroindolyl phosphate hydrolysis protein BAMF_0026 PF05816 Toxic anion resistance protein (TelA) BAMF_0027 PF03711 Orn/Lys/Arg decarboxylase, C-terminal domain BAMF_0027 PF01276 Orn/Lys/Arg decarboxylase, major domain BAMF_0028 PF02223 Thymidylate kinase BAMF_0029 PF06153 Cyclic-di-AMP receptor BAMF_0030 PF03885 Protein of unknown function (DUF327) BAMF_0031 PF09115 DNA polymerase III, delta subunit, C terminal BAMF_0032 PF04468 PSP1 C-terminal conserved region BAMF_0033 PF06156 Initiation control protein YabA BAMF_0034 PF05175 Methyltransferase small domain BAMF_0035 PF01541 GIY-YIG catalytic domain BAMF_0036 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases BAMF_0037 PF04014 Antidote-toxin recognition MazE, bacterial antitoxin BAMF_0037 PF18277 AbrB C-terminal domain BAMF_0038 PF08264 Anticodon-binding domain of tRNA BAMF_0038 PF09334 tRNA synthetases class I (M) BAMF_0038 PF01588 Putative tRNA binding domain BAMF_0039 PF01026 TatD related DNase BAMF_0040 PF07501 G5 domain BAMF_0040 PF03990 G5-linked-Ubiquitin-like domain BAMF_0040 PF06725 3D domain BAMF_0041 PF13662 Toprim domain BAMF_0041 PF13331 Domain of unknown function (DUF4093) BAMF_0042 PF00398 Ribosomal RNA adenine dimethylase BAMF_0043 PF05582 YabG peptidase U57 BAMF_0044 PF06257 Biofilm formation stimulator VEG BAMF_0045 PF00269 Small, acid-soluble spore proteins, alpha/beta type BAMF_0046 PF08544 GHMP kinases C terminal BAMF_0046 PF00288 GHMP kinases N terminal domain BAMF_0047 PF09182 Bacterial purine repressor, N-terminal BAMF_0047 PF00156 Phosphoribosyl transferase domain BAMF_0048 PF01042 Endoribonuclease L-PSP BAMF_0049 PF04026 SpoVG BAMF_0050 PF00483 Nucleotidyl transferase BAMF_0050 PF00132 Bacterial transferase hexapeptide (six repeats) BAMF_0051 PF13793 N-terminal domain of ribose phosphate pyrophosphokinase BAMF_0051 PF14572 Phosphoribosyl synthetase-associated domain BAMF_0052 PF14693 Ribosomal protein TL5, C-terminal domain BAMF_0052 PF01386 Ribosomal L25p family BAMF_0053 PF01195 Peptidyl-tRNA hydrolase BAMF_0054 PF10955 Protein of unknown function (DUF2757) BAMF_0055 PF02559 CarD-like/TRCF domain BAMF_0055 PF00271 Helicase conserved C-terminal domain BAMF_0055 PF03461 TRCF domain BAMF_0055 PF00270 DEAD/DEAH box helicase BAMF_0055 PF17757 UvrB interaction domain BAMF_0056 PF15714 Stage V sporulation protein T C-terminal, transcription factor BAMF_0056 PF04014 Antidote-toxin recognition MazE, bacterial antitoxin BAMF_0057 PF01943 Polysaccharide biosynthesis protein BAMF_0057 PF14667 Polysaccharide biosynthesis C-terminal domain BAMF_0058 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases BAMF_0058 PF03819 MazG nucleotide pyrophosphohydrolase domain BAMF_0059 PF01479 S4 domain BAMF_0060 PF07873 YabP family BAMF_0061 PF09578 Spore cortex protein YabQ (Spore_YabQ) BAMF_0062 PF04977 Septum formation initiator BAMF_0063 PF00575 S1 RNA binding domain BAMF_0064 PF07228 Stage II sporulation protein E (SpoIIE) BAMF_0065 PF00092 von Willebrand factor type A domain BAMF_0066 PF00069 Protein kinase domain BAMF_0067 PF09179 TilS substrate binding domain BAMF_0067 PF11734 TilS substrate C-terminal domain BAMF_0067 PF01171 PP-loop family BAMF_0069 PF01434 Peptidase family M41 BAMF_0069 PF06480 FtsH Extracellular BAMF_0069 PF00004 ATPase family associated with various cellular activities (AAA) BAMF_0069 PF17862 AAA+ lid domain BAMF_0070 PF03309 Type III pantothenate kinase BAMF_0071 PF01430 Hsp33 protein BAMF_0072 PF13145 PPIC-type PPIASE domain BAMF_0073 PF00291 Pyridoxal-phosphate dependent enzyme BAMF_0074 PF04715 Anthranilate synthase component I, N terminal region BAMF_0074 PF00425 chorismate binding enzyme BAMF_0075 PF00117 Glutamine amidotransferase class-I BAMF_0076 PF01063 Amino-transferase class IV BAMF_0077 PF00809 Pterin binding enzyme BAMF_0078 PF02152 Dihydroneopterin aldolase BAMF_0079 PF01288 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK) BAMF_0080 PF01207 Dihydrouridine synthase (Dus) BAMF_0081 PF00152 tRNA synthetases class II (D, K and N) BAMF_0081 PF01336 OB-fold nucleic acid binding domain BAMF_0082 PF05848 CtsR N-terminal HTH domain BAMF_0082 PF17727 CtsR C-terminal dimerization domain BAMF_0083 PF02151 UvrB/uvrC motif BAMF_0084 PF00217 ATP:guanido phosphotransferase, C-terminal catalytic domain BAMF_0085 PF17871 AAA lid domain BAMF_0085 PF10431 C-terminal, D2-small domain, of ClpB protein BAMF_0085 PF00004 ATPase family associated with various cellular activities (AAA) BAMF_0085 PF02861 Clp amino terminal domain, pathogenicity island component BAMF_0085 PF07724 AAA domain (Cdc48 subfamily) BAMF_0086 PF18073 Rubredoxin metal binding domain BAMF_0087 PF02457 DisA bacterial checkpoint controller nucleotide-binding BAMF_0087 PF10635 DisA bacterial checkpoint controller linker region BAMF_0089 PF01128 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase BAMF_0090 PF02542 YgbB family BAMF_0091 PF00749 tRNA synthetases class I (E and Q), catalytic domain BAMF_0093 PF00132 Bacterial transferase hexapeptide (six repeats) BAMF_0093 PF06426 Serine acetyltransferase, N-terminal BAMF_0094 PF09190 DALR domain BAMF_0094 PF01406 tRNA synthetases class I (C) catalytic domain BAMF_0095 PF00636 Ribonuclease III domain BAMF_0096 PF00588 SpoU rRNA Methylase family BAMF_0096 PF08032 RNA 2'-O ribose methyltransferase substrate binding BAMF_0097 PF05991 YacP-like NYN domain BAMF_0098 PF08281 Sigma-70, region 4 BAMF_0098 PF04542 Sigma-70 region 2 BAMF_0099 PF00471 Ribosomal protein L33 BAMF_0100 PF00584 SecE/Sec61-gamma subunits of protein translocation complex BAMF_0101 PF00467 KOW motif BAMF_0101 PF02357 Transcription termination factor nusG BAMF_0102 PF00298 Ribosomal protein L11, RNA binding domain BAMF_0102 PF03946 Ribosomal protein L11, N-terminal domain BAMF_0103 PF00687 Ribosomal protein L1p/L10e family BAMF_0104 PF00466 Ribosomal protein L10 BAMF_0105 PF16320 Ribosomal protein L7/L12 dimerisation domain BAMF_0105 PF00542 Ribosomal protein L7/L12 C-terminal domain BAMF_0106 PF05175 Methyltransferase small domain BAMF_0107 PF04563 RNA polymerase beta subunit BAMF_0107 PF04561 RNA polymerase Rpb2, domain 2 BAMF_0107 PF04565 RNA polymerase Rpb2, domain 3 BAMF_0107 PF10385 RNA polymerase beta subunit external 1 domain BAMF_0107 PF00562 RNA polymerase Rpb2, domain 6 BAMF_0107 PF04560 RNA polymerase Rpb2, domain 7 BAMF_0108 PF04997 RNA polymerase Rpb1, domain 1 BAMF_0108 PF00623 RNA polymerase Rpb1, domain 2 BAMF_0108 PF04983 RNA polymerase Rpb1, domain 3 BAMF_0108 PF05000 RNA polymerase Rpb1, domain 4 BAMF_0108 PF04998 RNA polymerase Rpb1, domain 5 BAMF_0109 PF01248 Ribosomal protein L7Ae/L30e/S12e/Gadd45 family BAMF_0110 PF00164 Ribosomal protein S12/S23 BAMF_0111 PF00177 Ribosomal protein S7p/S5e BAMF_0112 PF03144 Elongation factor Tu domain 2 BAMF_0112 PF00009 Elongation factor Tu GTP binding domain BAMF_0112 PF03764 Elongation factor G, domain IV BAMF_0112 PF14492 Elongation Factor G, domain II BAMF_0112 PF00679 Elongation factor G C-terminus BAMF_0113 PF03143 Elongation factor Tu C-terminal domain BAMF_0113 PF03144 Elongation factor Tu domain 2 BAMF_0113 PF00009 Elongation factor Tu GTP binding domain BAMF_0114 PF12146 Serine aminopeptidase, S33 BAMF_0115 PF00338 Ribosomal protein S10p/S20e BAMF_0116 PF00297 Ribosomal protein L3 BAMF_0117 PF00573 Ribosomal protein L4/L1 family BAMF_0118 PF00276 Ribosomal protein L23 BAMF_0119 PF00181 Ribosomal Proteins L2, RNA binding domain BAMF_0119 PF03947 Ribosomal Proteins L2, C-terminal domain BAMF_0120 PF00203 Ribosomal protein S19 BAMF_0121 PF00237 Ribosomal protein L22p/L17e BAMF_0122 PF00189 Ribosomal protein S3, C-terminal domain BAMF_0122 PF07650 KH domain BAMF_0123 PF00252 Ribosomal protein L16p/L10e BAMF_0124 PF00831 Ribosomal L29 protein BAMF_0125 PF00366 Ribosomal protein S17 BAMF_0126 PF00238 Ribosomal protein L14p/L23e BAMF_0127 PF17136 Ribosomal proteins 50S L24/mitochondrial 39S L24 BAMF_0127 PF00467 KOW motif BAMF_0128 PF00673 ribosomal L5P family C-terminus BAMF_0128 PF00281 Ribosomal protein L5 BAMF_0129 PF00253 Ribosomal protein S14p/S29e BAMF_0130 PF00410 Ribosomal protein S8 BAMF_0131 PF00347 Ribosomal protein L6 BAMF_0132 PF00861 Ribosomal L18 of archaea, bacteria, mitoch. and chloroplast BAMF_0133 PF03719 Ribosomal protein S5, C-terminal domain BAMF_0133 PF00333 Ribosomal protein S5, N-terminal domain BAMF_0134 PF00327 Ribosomal protein L30p/L7e BAMF_0135 PF00828 Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27A BAMF_0136 PF00344 SecY translocase BAMF_0137 PF05191 Adenylate kinase, active site lid BAMF_0138 PF00557 Metallopeptidase family M24 BAMF_0139 PF01176 Translation initiation factor 1A / IF-1 BAMF_0140 PF00444 Ribosomal protein L36 BAMF_0141 PF00416 Ribosomal protein S13/S18 BAMF_0142 PF00411 Ribosomal protein S11 BAMF_0143 PF03118 Bacterial RNA polymerase, alpha chain C terminal domain BAMF_0143 PF01000 RNA polymerase Rpb3/RpoA insert domain BAMF_0143 PF01193 RNA polymerase Rpb3/Rpb11 dimerisation domain BAMF_0144 PF01196 Ribosomal protein L17 BAMF_0145 PF00005 ABC transporter BAMF_0146 PF00005 ABC transporter BAMF_0147 PF02361 Cobalt transport protein BAMF_0148 PF01416 tRNA pseudouridine synthase BAMF_0149 PF00572 Ribosomal protein L13 BAMF_0150 PF00380 Ribosomal protein S9/S16 BAMF_0151 PF08241 Methyltransferase domain BAMF_0152 PF10730 Protein of unknown function (DUF2521) BAMF_0153 PF01520 N-acetylmuramoyl-L-alanine amidase BAMF_0154 PF10609 NUBPL iron-transfer P-loop NTPase BAMF_0155 PF17898 Spore germination GerD central core domain BAMF_0156 PF14089 KinB-signalling pathway activation in sporulation BAMF_0157 PF01522 Polysaccharide deacetylase BAMF_0158 PF07690 Major Facilitator Superfamily BAMF_0161 PF00107 Zinc-binding dehydrogenase BAMF_0161 PF08240 Alcohol dehydrogenase GroES-like domain BAMF_0162 PF00916 Sulfate permease family BAMF_0162 PF01740 STAS domain BAMF_0163 PF01758 Sodium Bile acid symporter family BAMF_0164 PF00756 Putative esterase BAMF_0165 PF01032 FecCD transport family BAMF_0166 PF01032 FecCD transport family BAMF_0167 PF01497 Periplasmic binding protein BAMF_0168 PF12833 Helix-turn-helix domain BAMF_0168 PF01497 Periplasmic binding protein BAMF_0169 PF07075 Protein of unknown function (DUF1343) BAMF_0170 PF00933 Glycosyl hydrolase family 3 N terminal domain BAMF_0170 PF01915 Glycosyl hydrolase family 3 C-terminal domain BAMF_0171 PF00144 Beta-lactamase BAMF_0172 PF00367 phosphotransferase system, EIIB BAMF_0172 PF02378 Phosphotransferase system, EIIC BAMF_0173 PF01380 SIS domain BAMF_0175 PF04463 Protein of unknown function (DUF523) BAMF_0176 PF04542 Sigma-70 region 2 BAMF_0176 PF08281 Sigma-70, region 4 BAMF_0177 PF13490 Putative zinc-finger BAMF_0178 PF02457 DisA bacterial checkpoint controller nucleotide-binding BAMF_0179 PF07949 YbbR-like protein BAMF_0180 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I BAMF_0180 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II BAMF_0180 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III BAMF_0180 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain BAMF_0181 PF01380 SIS domain BAMF_0186 PF16226 Domain of unknown function (DUF4885) BAMF_0187 PF00248 Aldo/keto reductase family BAMF_0188 PF04172 LrgB-like family BAMF_0189 PF03788 LrgA family BAMF_0190 PF01047 MarR family BAMF_0191 PF00324 Amino acid permease BAMF_0192 PF13419 Haloacid dehalogenase-like hydrolase BAMF_0193 PF07730 Histidine kinase BAMF_0194 PF00072 Response regulator receiver domain BAMF_0194 PF00196 Bacterial regulatory proteins, luxR family BAMF_0195 PF00005 ABC transporter BAMF_0199 PF16219 Domain of unknown function (DUF4879) BAMF_0200 PF17334 Minor curli fiber component A BAMF_0203 PF13520 Amino acid permease BAMF_0204 PF03009 Glycerophosphoryl diester phosphodiesterase family BAMF_0205 PF07690 Major Facilitator Superfamily BAMF_0206 PF10852 Protein of unknown function (DUF2651) BAMF_0207 PF03241 4-hydroxyphenylacetate 3-hydroxylase C terminal BAMF_0207 PF11794 4-hydroxyphenylacetate 3-hydroxylase N terminal BAMF_0210 PF00465 Iron-containing alcohol dehydrogenase BAMF_0211 PF02222 ATP-grasp domain BAMF_0212 PF01066 CDP-alcohol phosphatidyltransferase BAMF_0213 PF09335 SNARE associated Golgi protein BAMF_0214 PF02666 Phosphatidylserine decarboxylase BAMF_0217 PF00375 Sodium:dicarboxylate symporter family BAMF_0218 PF01063 Amino-transferase class IV BAMF_0219 PF00324 Amino acid permease BAMF_0220 PF02574 Homocysteine S-methyltransferase BAMF_0221 PF01235 Sodium:alanine symporter family BAMF_0222 PF04960 Glutaminase BAMF_0223 PF04960 Glutaminase BAMF_0225 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BAMF_0226 PF08664 YcbB domain BAMF_0226 PF00072 Response regulator receiver domain BAMF_0227 PF01636 Phosphotransferase enzyme family BAMF_0228 PF15777 Tryptophan RNA-binding attenuator protein inhibitory protein BAMF_0230 PF16916 Dimerisation domain of Zinc Transporter BAMF_0230 PF01545 Cation efflux family BAMF_0231 PF00881 Nitroreductase family BAMF_0232 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily BAMF_0233 PF07681 DoxX BAMF_0234 PF00085 Thioredoxin BAMF_0235 PF10710 Protein of unknown function (DUF2512) BAMF_0236 PF07486 Cell Wall Hydrolase BAMF_0237 PF09423 PhoD-like phosphatase BAMF_0237 PF16655 PhoD-like phosphatase, N-terminal domain BAMF_0238 PF02416 mttA/Hcf106 family BAMF_0239 PF00902 Sec-independent protein translocase protein (TatC) BAMF_0240 PF01470 Pyroglutamyl peptidase BAMF_0241 PF00266 Aminotransferase class-V BAMF_0242 PF07690 Major Facilitator Superfamily BAMF_0243 PF00440 Bacterial regulatory proteins, tetR family BAMF_0244 PF01674 Lipase (class 2) BAMF_0245 PF01674 Lipase (class 2) BAMF_0246 PF01674 Lipase (class 2) BAMF_0247 PF05225 helix-turn-helix, Psq domain BAMF_0247 PF02810 SEC-C motif BAMF_0248 PF00248 Aldo/keto reductase family BAMF_0249 PF17118 Domain of unknown function (DUF5105) BAMF_0249 PF11611 Domain of unknown function (DUF4352) BAMF_0250 PF16244 Domain of unknown function (DUF4901) BAMF_0251 PF16244 Domain of unknown function (DUF4901) BAMF_0252 PF13539 D-alanyl-D-alanine carboxypeptidase BAMF_0253 PF18801 response regulator aspartate phosphatase H, N terminal BAMF_0255 PF00128 Alpha amylase, catalytic domain BAMF_0257 PF10400 Virulence activator alpha C-term BAMF_0257 PF03551 Transcriptional regulator PadR-like family BAMF_0258 PF01297 Zinc-uptake complex component A periplasmic BAMF_0259 PF00005 ABC transporter BAMF_0260 PF00950 ABC 3 transport family BAMF_0261 PF00296 Luciferase-like monooxygenase BAMF_0262 PF02342 TerD domain BAMF_0263 PF02342 TerD domain BAMF_0264 PF02342 TerD domain BAMF_0265 PF03741 Integral membrane protein TerC family BAMF_0266 PF14266 Putative component of 'biosynthetic module' BAMF_0267 PF05816 Toxic anion resistance protein (TelA) BAMF_0268 PF07690 Major Facilitator Superfamily BAMF_0269 PF00005 ABC transporter BAMF_0269 PF00571 CBS domain BAMF_0270 PF00528 Binding-protein-dependent transport system inner membrane component BAMF_0271 PF04069 Substrate binding domain of ABC-type glycine betaine transport system BAMF_0272 PF01546 Peptidase family M20/M25/M40 BAMF_0272 PF07687 Peptidase dimerisation domain BAMF_0273 PF03606 C4-dicarboxylate anaerobic carrier BAMF_0274 PF03606 C4-dicarboxylate anaerobic carrier BAMF_0276 PF06271 RDD family BAMF_0277 PF00056 lactate/malate dehydrogenase, NAD binding domain BAMF_0277 PF02866 lactate/malate dehydrogenase, alpha/beta C-terminal domain BAMF_0278 PF07690 Major Facilitator Superfamily BAMF_0279 PF01047 MarR family BAMF_0281 PF01810 LysE type translocator BAMF_0282 PF01810 LysE type translocator BAMF_0283 PF08892 YqcI/YcgG family BAMF_0284 PF00324 Amino acid permease BAMF_0285 PF09347 Domain of unknown function (DUF1989) BAMF_0286 PF02540 NAD synthase BAMF_0287 PF01261 Xylose isomerase-like TIM barrel BAMF_0288 PF07690 Major Facilitator Superfamily BAMF_0289 PF07690 Major Facilitator Superfamily BAMF_0290 PF01202 Shikimate kinase BAMF_0291 PF05448 Acetyl xylan esterase (AXE1) BAMF_0292 PF10127 RNA repair pathway DNA polymerase beta family BAMF_0293 PF01619 Proline dehydrogenase BAMF_0294 PF00171 Aldehyde dehydrogenase family BAMF_0295 PF00474 Sodium:solute symporter family BAMF_0296 PF17853 GGDEF-like domain BAMF_0296 PF13556 PucR C-terminal helix-turn-helix domain BAMF_0297 PF07992 Pyridine nucleotide-disulphide oxidoreductase BAMF_0298 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases BAMF_0299 PF00355 Rieske [2Fe-2S] domain BAMF_0300 PF18267 Rubredoxin NAD+ reductase C-terminal domain BAMF_0300 PF07992 Pyridine nucleotide-disulphide oxidoreductase BAMF_0300 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain BAMF_0300 PF04324 BFD-like [2Fe-2S] binding domain BAMF_0300 PF01077 Nitrite and sulphite reductase 4Fe-4S domain BAMF_0301 PF07690 Major Facilitator Superfamily BAMF_0302 PF07683 Cobalamin synthesis protein cobW C-terminal domain BAMF_0302 PF02492 CobW/HypB/UreG, nucleotide-binding domain BAMF_0303 PF13823 Alcohol dehydrogenase GroES-associated BAMF_0303 PF08240 Alcohol dehydrogenase GroES-like domain BAMF_0303 PF00107 Zinc-binding dehydrogenase BAMF_0304 PF06271 RDD family BAMF_0305 PF10925 Protein of unknown function (DUF2680) BAMF_0306 PF00232 Glycosyl hydrolase family 1 BAMF_0307 PF11033 Competence protein J (ComJ) BAMF_0308 PF14040 Deoxyribonuclease NucA/NucB BAMF_0309 PF01380 SIS domain BAMF_0310 PF00215 Orotidine 5'-phosphate decarboxylase / HUMPS family BAMF_0311 PF01638 HxlR-like helix-turn-helix BAMF_0312 PF00550 Phosphopantetheine attachment site BAMF_0312 PF00668 Condensation domain BAMF_0312 PF00501 AMP-binding enzyme BAMF_0312 PF13193 AMP-binding enzyme C-terminal domain BAMF_0313 PF00550 Phosphopantetheine attachment site BAMF_0313 PF00501 AMP-binding enzyme BAMF_0313 PF13193 AMP-binding enzyme C-terminal domain BAMF_0313 PF00668 Condensation domain BAMF_0314 PF13193 AMP-binding enzyme C-terminal domain BAMF_0314 PF00668 Condensation domain BAMF_0314 PF00550 Phosphopantetheine attachment site BAMF_0314 PF00975 Thioesterase domain BAMF_0314 PF00501 AMP-binding enzyme BAMF_0315 PF00975 Thioesterase domain BAMF_0316 PF07685 CobB/CobQ-like glutamine amidotransferase domain BAMF_0316 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain BAMF_0316 PF00155 Aminotransferase class I and II BAMF_0317 PF01648 4'-phosphopantetheinyl transferase superfamily BAMF_0319 PF00005 ABC transporter BAMF_0320 PF00528 Binding-protein-dependent transport system inner membrane component BAMF_0321 PF00497 Bacterial extracellular solute-binding proteins, family 3 BAMF_0322 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family BAMF_0322 PF03466 LysR substrate binding domain BAMF_0323 PF02441 Flavoprotein BAMF_0324 PF01977 3-octaprenyl-4-hydroxybenzoate carboxy-lyase BAMF_0327 PF00854 POT family BAMF_0328 PF12708 Pectate lyase superfamily protein BAMF_0328 PF13229 Right handed beta helix region BAMF_0330 PF03323 Bacillus/Clostridium GerA spore germination protein BAMF_0331 PF05504 Spore germination B3/ GerAC like, C-terminal BAMF_0332 PF03845 Spore germination protein BAMF_0335 PF00497 Bacterial extracellular solute-binding proteins, family 3 BAMF_0336 PF00528 Binding-protein-dependent transport system inner membrane component BAMF_0337 PF00005 ABC transporter BAMF_0339 PF03972 MmgE/PrpD family BAMF_0340 PF00005 ABC transporter BAMF_0341 PF02687 FtsX-like permease family BAMF_0341 PF12704 MacB-like periplasmic core domain BAMF_0342 PF00486 Transcriptional regulatory protein, C terminal BAMF_0342 PF00072 Response regulator receiver domain BAMF_0343 PF00512 His Kinase A (phospho-acceptor) domain BAMF_0343 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BAMF_0343 PF00672 HAMP domain BAMF_0344 PF18801 response regulator aspartate phosphatase H, N terminal BAMF_0345 PF11131 Rap-phr extracellular signalling BAMF_0346 PF09680 Family of unknown function BAMF_0347 PF00696 Amino acid kinase family BAMF_0347 PF13840 ACT domain BAMF_0348 PF01032 FecCD transport family BAMF_0349 PF01032 FecCD transport family BAMF_0350 PF00005 ABC transporter BAMF_0351 PF01497 Periplasmic binding protein BAMF_0352 PF07690 Major Facilitator Superfamily BAMF_0353 PF00440 Bacterial regulatory proteins, tetR family BAMF_0354 PF00881 Nitroreductase family BAMF_0355 PF03992 Antibiotic biosynthesis monooxygenase BAMF_0356 PF01022 Bacterial regulatory protein, arsR family BAMF_0357 PF00155 Aminotransferase class I and II BAMF_0357 PF00392 Bacterial regulatory proteins, gntR family BAMF_0358 PF00202 Aminotransferase class-III BAMF_0359 PF00171 Aldehyde dehydrogenase family BAMF_0360 PF06800 Sugar transport protein BAMF_0362 PF07987 Domain of unkown function (DUF1775) BAMF_0363 PF13115 YtkA-like BAMF_0363 PF04234 CopC domain BAMF_0363 PF05425 Copper resistance protein D BAMF_0364 PF05573 NosL BAMF_0364 PF08220 DeoR-like helix-turn-helix domain BAMF_0366 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit BAMF_0366 PF02378 Phosphotransferase system, EIIC BAMF_0367 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 BAMF_0368 PF01232 Mannitol dehydrogenase Rossmann domain BAMF_0368 PF08125 Mannitol dehydrogenase C-terminal domain BAMF_0369 PF07977 FabA-like domain BAMF_0372 PF03746 LamB/YcsF family BAMF_0373 PF01566 Natural resistance-associated macrophage protein BAMF_0374 PF07286 Protein of unknown function (DUF1445) BAMF_0375 PF02682 Carboxyltransferase domain, subdomain C and D BAMF_0376 PF02626 Carboxyltransferase domain, subdomain A and B BAMF_0377 PF09339 IclR helix-turn-helix domain BAMF_0377 PF01614 Bacterial transcriptional regulator BAMF_0378 PF13472 GDSL-like Lipase/Acylhydrolase family BAMF_0379 PF13129 Protein of unknown function (DUF3953) BAMF_0380 PF03992 Antibiotic biosynthesis monooxygenase BAMF_0381 PF00905 Penicillin binding protein transpeptidase domain BAMF_0381 PF03717 Penicillin-binding Protein dimerisation domain BAMF_0381 PF05223 NTF2-like N-terminal transpeptidase domain BAMF_0382 PF00248 Aldo/keto reductase family BAMF_0383 PF08279 HTH domain BAMF_0383 PF05043 Mga helix-turn-helix domain BAMF_0383 PF00874 PRD domain BAMF_0383 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit BAMF_0383 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 BAMF_0384 PF00501 AMP-binding enzyme BAMF_0384 PF13193 AMP-binding enzyme C-terminal domain BAMF_0387 PF13302 Acetyltransferase (GNAT) domain BAMF_0388 PF16242 Pyridoxamine 5'-phosphate oxidase like BAMF_0389 PF10997 Alternate to MurJ BAMF_0390 PF12823 Domain of unknown function (DUF3817) BAMF_0391 PF01037 Lrp/AsnC ligand binding domain BAMF_0392 PF01751 Toprim domain BAMF_0392 PF01131 DNA topoisomerase BAMF_0395 PF00990 Diguanylate cyclase, GGDEF domain BAMF_0396 PF10096 Uncharacterized protein conserved in bacteria (DUF2334) BAMF_0398 PF03170 Bacterial cellulose synthase subunit BAMF_0399 PF13520 Amino acid permease BAMF_0400 PF00205 Thiamine pyrophosphate enzyme, central domain BAMF_0400 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain BAMF_0400 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain BAMF_0402 PF05257 CHAP domain BAMF_0402 PF01476 LysM domain BAMF_0407 PF13176 Tetratricopeptide repeat BAMF_0407 PF18801 response regulator aspartate phosphatase H, N terminal BAMF_0408 PF10676 Spore germination protein gerPA/gerPF BAMF_0410 PF01566 Natural resistance-associated macrophage protein BAMF_0412 PF09954 Uncharacterized protein conserved in bacteria (DUF2188) BAMF_0413 PF17314 Family of unknown function (DUF5360) BAMF_0414 PF00893 Small Multidrug Resistance protein BAMF_0415 PF12787 EcsC protein family BAMF_0416 PF10685 Stress-induced bacterial acidophilic repeat motif BAMF_0416 PF00477 Small hydrophilic plant seed protein BAMF_0417 PF07883 Cupin domain BAMF_0418 PF16291 Domain of unknown function (DUF4937 BAMF_0419 PF05067 Manganese containing catalase BAMF_0420 PF03480 Bacterial extracellular solute-binding protein, family 7 BAMF_0421 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BAMF_0421 PF17203 Single cache domain 3 BAMF_0421 PF14689 Sensor_kinase_SpoOB-type, alpha-helical domain BAMF_0422 PF00072 Response regulator receiver domain BAMF_0422 PF08279 HTH domain BAMF_0423 PF00375 Sodium:dicarboxylate symporter family BAMF_0424 PF01594 AI-2E family transporter BAMF_0425 PF00005 ABC transporter BAMF_0428 PF02770 Acyl-CoA dehydrogenase, middle domain BAMF_0428 PF08028 Acyl-CoA dehydrogenase, C-terminal domain BAMF_0428 PF02771 Acyl-CoA dehydrogenase, N-terminal domain BAMF_0429 PF13040 Fur-regulated basic protein B BAMF_0431 PF01545 Cation efflux family BAMF_0431 PF16916 Dimerisation domain of Zinc Transporter BAMF_0432 PF00085 Thioredoxin BAMF_0433 PF01820 D-ala D-ala ligase N-terminus BAMF_0433 PF07478 D-ala D-ala ligase C-terminus BAMF_0434 PF08245 Mur ligase middle domain BAMF_0434 PF02875 Mur ligase family, glutamate ligase domain BAMF_0434 PF01225 Mur ligase family, catalytic domain BAMF_0435 PF00271 Helicase conserved C-terminal domain BAMF_0435 PF00270 DEAD/DEAH box helicase BAMF_0436 PF03703 Bacterial PH domain BAMF_0437 PF03703 Bacterial PH domain BAMF_0438 PF01694 Rhomboid family BAMF_0439 PF01648 4'-phosphopantetheinyl transferase superfamily BAMF_0441 PF00842 Alanine racemase, C-terminal domain BAMF_0441 PF01168 Alanine racemase, N-terminal domain BAMF_0442 PF01402 Ribbon-helix-helix protein, copG family BAMF_0443 PF02452 PemK-like, MazF-like toxin of type II toxin-antitoxin system BAMF_0444 PF01740 STAS domain BAMF_0444 PF08678 Rsbr N terminal BAMF_0445 PF01740 STAS domain BAMF_0446 PF13581 Histidine kinase-like ATPase domain BAMF_0447 PF07228 Stage II sporulation protein E (SpoIIE) BAMF_0447 PF08673 Phosphoserine phosphatase RsbU, N-terminal domain BAMF_0448 PF01740 STAS domain BAMF_0449 PF13581 Histidine kinase-like ATPase domain BAMF_0450 PF04542 Sigma-70 region 2 BAMF_0450 PF04545 Sigma-70, region 4 BAMF_0450 PF04539 Sigma-70 region 3 BAMF_0451 PF07228 Stage II sporulation protein E (SpoIIE) BAMF_0452 PF16921 Tex protein YqgF-like domain BAMF_0452 PF09371 Tex-like protein N-terminal domain BAMF_0452 PF00575 S1 RNA binding domain BAMF_0452 PF17674 HHH domain BAMF_0454 PF10263 SprT-like family BAMF_0456 PF02082 Transcriptional regulator BAMF_0457 PF02525 Flavodoxin-like fold BAMF_0458 PF00313 'Cold-shock' DNA-binding domain BAMF_0460 PF01177 Asp/Glu/Hydantoin racemase BAMF_0463 PF00155 Aminotransferase class I and II BAMF_0463 PF00392 Bacterial regulatory proteins, gntR family BAMF_0464 PF07690 Major Facilitator Superfamily BAMF_0465 PF01734 Patatin-like phospholipase BAMF_0466 PF01734 Patatin-like phospholipase BAMF_0468 PF08031 Berberine and berberine like BAMF_0468 PF01565 FAD binding domain BAMF_0470 PF01545 Cation efflux family BAMF_0470 PF16916 Dimerisation domain of Zinc Transporter BAMF_0472 PF07883 Cupin domain BAMF_0473 PF00583 Acetyltransferase (GNAT) family BAMF_0474 PF06445 GyrI-like small molecule binding domain BAMF_0474 PF12833 Helix-turn-helix domain BAMF_0476 PF04055 Radical SAM superfamily BAMF_0479 PF00107 Zinc-binding dehydrogenase BAMF_0479 PF08240 Alcohol dehydrogenase GroES-like domain BAMF_0480 PF13411 MerR HTH family regulatory protein BAMF_0482 PF00155 Aminotransferase class I and II BAMF_0482 PF00392 Bacterial regulatory proteins, gntR family BAMF_0483 PF04299 Putative FMN-binding domain BAMF_0484 PF07690 Major Facilitator Superfamily BAMF_0485 PF16859 Tetracyclin repressor-like, C-terminal domain BAMF_0485 PF00440 Bacterial regulatory proteins, tetR family BAMF_0486 PF00892 EamA-like transporter family BAMF_0487 PF00155 Aminotransferase class I and II BAMF_0487 PF00392 Bacterial regulatory proteins, gntR family BAMF_0488 PF07875 Coat F domain BAMF_0490 PF00107 Zinc-binding dehydrogenase BAMF_0490 PF08240 Alcohol dehydrogenase GroES-like domain BAMF_0490 PF13823 Alcohol dehydrogenase GroES-associated BAMF_0491 PF07875 Coat F domain BAMF_0493 PF03176 MMPL family BAMF_0494 PF07722 Peptidase C26 BAMF_0496 PF13302 Acetyltransferase (GNAT) domain BAMF_0497 PF02588 Uncharacterised 5xTM membrane BCR, YitT family COG1284 BAMF_0497 PF10035 Uncharacterized protein conserved in bacteria (DUF2179) BAMF_0498 PF00465 Iron-containing alcohol dehydrogenase BAMF_0499 PF07690 Major Facilitator Superfamily BAMF_0500 PF02801 Beta-ketoacyl synthase, C-terminal domain BAMF_0500 PF00109 Beta-ketoacyl synthase, N-terminal domain BAMF_0502 PF01925 Sulfite exporter TauE/SafE BAMF_0503 PF00583 Acetyltransferase (GNAT) family BAMF_0504 PF13411 MerR HTH family regulatory protein BAMF_0504 PF06445 GyrI-like small molecule binding domain BAMF_0505 PF00892 EamA-like transporter family BAMF_0506 PF00293 NUDIX domain BAMF_0507 PF00561 alpha/beta hydrolase fold BAMF_0508 PF00180 Isocitrate/isopropylmalate dehydrogenase BAMF_0509 PF07729 FCD domain BAMF_0509 PF00392 Bacterial regulatory proteins, gntR family BAMF_0510 PF00201 UDP-glucoronosyl and UDP-glucosyl transferase BAMF_0511 PF00201 UDP-glucoronosyl and UDP-glucosyl transferase BAMF_0513 PF11954 Domain of unknown function (DUF3471) BAMF_0513 PF00144 Beta-lactamase BAMF_0514 PF07563 Protein of unknown function (DUF1541) BAMF_0515 PF07690 Major Facilitator Superfamily BAMF_0516 PF00392 Bacterial regulatory proteins, gntR family BAMF_0516 PF07702 UTRA domain BAMF_0517 PF00392 Bacterial regulatory proteins, gntR family BAMF_0517 PF07729 FCD domain BAMF_0518 PF07690 Major Facilitator Superfamily BAMF_0519 PF00893 Small Multidrug Resistance protein BAMF_0520 PF00893 Small Multidrug Resistance protein BAMF_0521 PF17934 Tetracyclin repressor-like, C-terminal domain BAMF_0521 PF00440 Bacterial regulatory proteins, tetR family BAMF_0522 PF13520 Amino acid permease BAMF_0524 PF08327 Activator of Hsp90 ATPase homolog 1-like protein BAMF_0525 PF00107 Zinc-binding dehydrogenase BAMF_0525 PF08240 Alcohol dehydrogenase GroES-like domain BAMF_0526 PF00083 Sugar (and other) transporter BAMF_0527 PF02769 AIR synthase related protein, C-terminal domain BAMF_0527 PF00586 AIR synthase related protein, N-terminal domain BAMF_0528 PF02367 Threonylcarbamoyl adenosine biosynthesis protein TsaE BAMF_0529 PF00814 Glycoprotease family BAMF_0530 PF00583 Acetyltransferase (GNAT) family BAMF_0531 PF00814 Glycoprotease family BAMF_0532 PF12848 ABC transporter BAMF_0532 PF16326 ABC transporter C-terminal domain BAMF_0532 PF00005 ABC transporter BAMF_0533 PF01967 MoaC family BAMF_0534 PF02629 CoA binding domain BAMF_0534 PF06971 Putative DNA-binding protein N-terminus BAMF_0535 PF02416 mttA/Hcf106 family BAMF_0536 PF00902 Sec-independent protein translocase protein (TatC) BAMF_0537 PF14146 Domain of unknown function (DUF4305) BAMF_0538 PF02517 CPBP intramembrane metalloprotease BAMF_0539 PF00166 Chaperonin 10 Kd subunit BAMF_0540 PF00118 TCP-1/cpn60 chaperonin family BAMF_0544 PF01381 Helix-turn-helix BAMF_0546 PF01381 Helix-turn-helix BAMF_0547 PF17448 Uncharacterized YqaH-like BAMF_0548 PF09466 Hypothetical protein Yqai BAMF_0550 PF09588 YqaJ-like viral recombinase domain BAMF_0551 PF09588 YqaJ-like viral recombinase domain BAMF_0552 PF03837 RecT family BAMF_0553 PF07261 Replication initiation and membrane attachment BAMF_0554 PF01695 IstB-like ATP binding protein BAMF_0559 PF17356 Phage-like element PBSX protein XtrA BAMF_0562 PF00145 C-5 cytosine-specific DNA methylase BAMF_0567 PF09643 YopX protein BAMF_0573 PF08281 Sigma-70, region 4 BAMF_0577 PF10668 Phage terminase small subunit BAMF_0578 PF04466 Phage terminase large subunit BAMF_0578 PF17288 Terminase RNAseH like domain BAMF_0590 PF00704 Glycosyl hydrolases family 18 BAMF_0590 PF00041 Fibronectin type III domain BAMF_0599 PF10779 Haemolysin XhlA BAMF_0600 PF04688 SPP1 phage holin BAMF_0601 PF01510 N-acetylmuramoyl-L-alanine amidase BAMF_0601 PF01476 LysM domain BAMF_0601 PF01471 Putative peptidoglycan binding domain BAMF_0603 PF01471 Putative peptidoglycan binding domain BAMF_0603 PF08924 Domain of unknown function (DUF1906) BAMF_0605 PF00931 NB-ARC domain BAMF_0605 PF13176 Tetratricopeptide repeat BAMF_0606 PF08240 Alcohol dehydrogenase GroES-like domain BAMF_0606 PF00107 Zinc-binding dehydrogenase BAMF_0608 PF00294 pfkB family carbohydrate kinase BAMF_0609 PF14154 Domain of unknown function (DUF4306) BAMF_0610 PF04012 PspA/IM30 family BAMF_0611 PF08271 TFIIB zinc-binding BAMF_0612 PF04536 TPM domain BAMF_0613 PF13421 SPFH domain-Band 7 family BAMF_0614 PF01757 Acyltransferase family BAMF_0615 PF11738 Protein of unknown function (DUF3298) BAMF_0615 PF13739 Deacetylase PdaC BAMF_0616 PF04542 Sigma-70 region 2 BAMF_0616 PF08281 Sigma-70, region 4 BAMF_0617 PF08240 Alcohol dehydrogenase GroES-like domain BAMF_0617 PF00107 Zinc-binding dehydrogenase BAMF_0618 PF03330 Lytic transglycolase BAMF_0619 PF07676 WD40-like Beta Propeller Repeat BAMF_0621 PF14169 Cold-inducible protein YdjO BAMF_0622 PF07732 Multicopper oxidase BAMF_0622 PF00394 Multicopper oxidase BAMF_0622 PF07731 Multicopper oxidase BAMF_0623 PF00324 Amino acid permease BAMF_0624 PF16916 Dimerisation domain of Zinc Transporter BAMF_0624 PF01545 Cation efflux family BAMF_0625 PF07726 ATPase family associated with various cellular activities (AAA) BAMF_0625 PF17863 AAA lid domain BAMF_0626 PF01882 Protein of unknown function DUF58 BAMF_0627 PF01841 Transglutaminase-like superfamily BAMF_0627 PF13559 Domain of unknown function (DUF4129) BAMF_0627 PF11992 Domain of unknown function (DUF3488) BAMF_0628 PF00958 GMP synthase C terminal domain BAMF_0628 PF02540 NAD synthase BAMF_0628 PF00117 Glutamine amidotransferase class-I BAMF_0629 PF04545 Sigma-70, region 4 BAMF_0629 PF04542 Sigma-70 region 2 BAMF_0631 PF00860 Permease family BAMF_0633 PF13076 Fur-regulated basic protein A BAMF_0634 PF10035 Uncharacterized protein conserved in bacteria (DUF2179) BAMF_0635 PF14044 NETI protein BAMF_0636 PF00731 AIR carboxylase BAMF_0637 PF17769 Phosphoribosylaminoimidazole carboxylase C-terminal domain BAMF_0637 PF02222 ATP-grasp domain BAMF_0638 PF10397 Adenylosuccinate lyase C-terminus BAMF_0638 PF00206 Lyase BAMF_0639 PF01259 SAICAR synthetase BAMF_0640 PF02700 Phosphoribosylformylglycinamidine (FGAM) synthase BAMF_0642 PF02769 AIR synthase related protein, C-terminal domain BAMF_0642 PF00586 AIR synthase related protein, N-terminal domain BAMF_0642 PF18072 Formylglycinamide ribonucleotide amidotransferase linker domain BAMF_0643 PF00156 Phosphoribosyl transferase domain BAMF_0644 PF00586 AIR synthase related protein, N-terminal domain BAMF_0644 PF02769 AIR synthase related protein, C-terminal domain BAMF_0645 PF00551 Formyl transferase BAMF_0646 PF02142 MGS-like domain BAMF_0646 PF01808 AICARFT/IMPCHase bienzyme BAMF_0647 PF02843 Phosphoribosylglycinamide synthetase, C domain BAMF_0647 PF01071 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain BAMF_0647 PF02844 Phosphoribosylglycinamide synthetase, N domain BAMF_0648 PF01037 Lrp/AsnC ligand binding domain BAMF_0649 PF13520 Amino acid permease BAMF_0650 PF11127 Protein of unknown function (DUF2892) BAMF_0651 PF13382 Adenine deaminase C-terminal domain BAMF_0651 PF01979 Amidohydrolase family BAMF_0652 PF11258 Protein of unknown function (DUF3048) N-terminal domain BAMF_0652 PF17479 Protein of unknown function (DUF3048) C-terminal domain BAMF_0653 PF01371 Trp repressor protein BAMF_0654 PF01645 Conserved region in glutamate synthase BAMF_0655 PF01884 PcrB family BAMF_0656 PF13361 UvrD-like helicase C-terminal domain BAMF_0656 PF00580 UvrD/REP helicase N-terminal domain BAMF_0657 PF03119 NAD-dependent DNA ligase C4 zinc finger domain BAMF_0657 PF00533 BRCA1 C Terminus (BRCT) domain BAMF_0657 PF03120 NAD-dependent DNA ligase OB-fold domain BAMF_0657 PF12826 Helix-hairpin-helix motif BAMF_0657 PF01653 NAD-dependent DNA ligase adenylation domain BAMF_0658 PF07537 CamS sex pheromone cAM373 precursor BAMF_0659 PF01636 Phosphotransferase enzyme family BAMF_0660 PF02308 MgtC family BAMF_0661 PF00474 Sodium:solute symporter family BAMF_0662 PF02686 Glu-tRNAGln amidotransferase C subunit BAMF_0663 PF01425 Amidase BAMF_0664 PF02934 GatB/GatE catalytic domain BAMF_0664 PF02637 GatB domain BAMF_0665 PF00440 Bacterial regulatory proteins, tetR family BAMF_0666 PF00873 AcrB/AcrD/AcrF family BAMF_0667 PF00781 Diacylglycerol kinase catalytic domain BAMF_0668 PF01938 TRAM domain BAMF_0668 PF05958 tRNA (Uracil-5-)-methyltransferase BAMF_0670 PF00005 ABC transporter BAMF_0672 PF04634 Protein of unknown function, DUF600 BAMF_0673 PF04634 Protein of unknown function, DUF600 BAMF_0674 PF04634 Protein of unknown function, DUF600 BAMF_0675 PF04740 LXG domain of WXG superfamily BAMF_0676 PF14411 A nuclease of the HNH/ENDO VII superfamily with conserved LHH BAMF_0676 PF04740 LXG domain of WXG superfamily BAMF_0677 PF01709 Transcriptional regulator BAMF_0679 PF04439 Streptomycin adenylyltransferase BAMF_0680 PF11007 Spore coat associated protein JA (CotJA) BAMF_0681 PF12652 CotJB protein BAMF_0682 PF05067 Manganese containing catalase BAMF_0683 PF00583 Acetyltransferase (GNAT) family BAMF_0685 PF04239 Protein of unknown function (DUF421) BAMF_0686 PF03992 Antibiotic biosynthesis monooxygenase BAMF_0687 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily BAMF_0688 PF01740 STAS domain BAMF_0688 PF14361 RsbT co-antagonist protein rsbRD N-terminal domain BAMF_0689 PF10055 Uncharacterized small protein (DUF2292) BAMF_0690 PF01687 Riboflavin kinase BAMF_0691 PF01027 Inhibitor of apoptosis-promoting Bax1 BAMF_0692 PF01047 MarR family BAMF_0693 PF01494 FAD binding domain BAMF_0694 PF13037 Domain of unknown function (DUF3898) BAMF_0694 PF13039 Protein of unknown function (DUF3900) BAMF_0695 PF00258 Flavodoxin BAMF_0695 PF00067 Cytochrome P450 BAMF_0695 PF00175 Oxidoreductase NAD-binding domain BAMF_0695 PF00667 FAD binding domain BAMF_0696 PF00884 Sulfatase BAMF_0697 PF00483 Nucleotidyl transferase BAMF_0698 PF16363 GDP-mannose 4,6 dehydratase BAMF_0699 PF03407 Nucleotide-diphospho-sugar transferase BAMF_0700 PF00535 Glycosyl transferase family 2 BAMF_0701 PF03407 Nucleotide-diphospho-sugar transferase BAMF_0702 PF07690 Major Facilitator Superfamily BAMF_0703 PF13520 Amino acid permease BAMF_0704 PF00171 Aldehyde dehydrogenase family BAMF_0705 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain BAMF_0707 PF00535 Glycosyl transferase family 2 BAMF_0707 PF13181 Tetratricopeptide repeat BAMF_0708 PF00005 ABC transporter BAMF_0708 PF16326 ABC transporter C-terminal domain BAMF_0708 PF12848 ABC transporter BAMF_0709 PF13411 MerR HTH family regulatory protein BAMF_0710 PF07690 Major Facilitator Superfamily BAMF_0711 PF12848 ABC transporter BAMF_0711 PF00005 ABC transporter BAMF_0712 PF00270 DEAD/DEAH box helicase BAMF_0712 PF00271 Helicase conserved C-terminal domain BAMF_0713 PF16884 N-terminal domain of oxidoreductase BAMF_0713 PF00107 Zinc-binding dehydrogenase BAMF_0714 PF16884 N-terminal domain of oxidoreductase BAMF_0714 PF00107 Zinc-binding dehydrogenase BAMF_0715 PF11486 Protein of unknown function (DUF3212) BAMF_0716 PF11181 Heat induced stress protein YflT BAMF_0717 PF00544 Pectate lyase BAMF_0718 PF00939 Sodium:sulfate symporter transmembrane region BAMF_0722 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BAMF_0722 PF06580 Histidine kinase BAMF_0723 PF04397 LytTr DNA-binding domain BAMF_0723 PF00072 Response regulator receiver domain BAMF_0725 PF04203 Sortase domain BAMF_0726 PF14689 Sensor_kinase_SpoOB-type, alpha-helical domain BAMF_0726 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BAMF_0727 PF08279 HTH domain BAMF_0727 PF00072 Response regulator receiver domain BAMF_0727 PF12431 Transcriptional regulator BAMF_0728 PF03401 Tripartite tricarboxylate transporter family receptor BAMF_0729 PF03600 Citrate transporter BAMF_0730 PF00753 Metallo-beta-lactamase superfamily BAMF_0731 PF02898 Nitric oxide synthase, oxygenase domain BAMF_0732 PF00708 Acylphosphatase BAMF_0733 PF03475 3-alpha domain BAMF_0733 PF03473 MOSC domain BAMF_0734 PF11121 Protein of unknown function (DUF2639) BAMF_0736 PF11588 Protein of unknown function (DUF3243) BAMF_0737 PF00557 Metallopeptidase family M24 BAMF_0738 PF00367 phosphotransferase system, EIIB BAMF_0738 PF02378 Phosphotransferase system, EIIC BAMF_0739 PF10787 Uncharacterised protein from bacillus cereus group BAMF_0740 PF00884 Sulfatase BAMF_0741 PF09350 Domain of unknown function (DUF1992) BAMF_0742 PF00011 Hsp20/alpha crystallin family BAMF_0743 PF10676 Spore germination protein gerPA/gerPF BAMF_0744 PF10676 Spore germination protein gerPA/gerPF BAMF_0745 PF00367 phosphotransferase system, EIIB BAMF_0745 PF02378 Phosphotransferase system, EIIC BAMF_0746 PF00367 phosphotransferase system, EIIB BAMF_0746 PF02378 Phosphotransferase system, EIIC BAMF_0747 PF00128 Alpha amylase, catalytic domain BAMF_0747 PF16657 Maltogenic Amylase, C-terminal domain BAMF_0748 PF00392 Bacterial regulatory proteins, gntR family BAMF_0748 PF07702 UTRA domain BAMF_0749 PF00881 Nitroreductase family BAMF_0752 PF02872 5'-nucleotidase, C-terminal domain BAMF_0752 PF00149 Calcineurin-like phosphoesterase BAMF_0753 PF01965 DJ-1/PfpI family BAMF_0754 PF00356 Bacterial regulatory proteins, lacI family BAMF_0755 PF08501 Shikimate dehydrogenase substrate binding domain BAMF_0755 PF18317 Shikimate 5'-dehydrogenase C-terminal domain BAMF_0756 PF01487 Type I 3-dehydroquinase BAMF_0757 PF07690 Major Facilitator Superfamily BAMF_0758 PF06569 Protein of unknown function (DUF1128) BAMF_0759 PF01451 Low molecular weight phosphotyrosine protein phosphatase BAMF_0761 PF03631 Virulence factor BrkB BAMF_0762 PF07690 Major Facilitator Superfamily BAMF_0763 PF01699 Sodium/calcium exchanger protein BAMF_0764 PF14167 YfkD-like protein BAMF_0765 PF00924 Mechanosensitive ion channel BAMF_0766 PF08756 YfkB-like domain BAMF_0766 PF04055 Radical SAM superfamily BAMF_0767 PF04055 Radical SAM superfamily BAMF_0767 PF08756 YfkB-like domain BAMF_0769 PF01522 Polysaccharide deacetylase BAMF_0770 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase BAMF_0770 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase BAMF_0771 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase BAMF_0771 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase BAMF_0773 PF01544 CorA-like Mg2+ transporter protein BAMF_0774 PF00730 HhH-GPD superfamily base excision DNA repair protein BAMF_0775 PF05958 tRNA (Uracil-5-)-methyltransferase BAMF_0775 PF01938 TRAM domain BAMF_0776 PF00082 Subtilase family BAMF_0777 PF00664 ABC transporter transmembrane region BAMF_0777 PF00005 ABC transporter BAMF_0778 PF00069 Protein kinase domain BAMF_0779 PF01207 Dihydrouridine synthase (Dus) BAMF_0781 PF00676 Dehydrogenase E1 component BAMF_0782 PF02779 Transketolase, pyrimidine binding domain BAMF_0782 PF02780 Transketolase, C-terminal domain BAMF_0783 PF00364 Biotin-requiring enzyme BAMF_0783 PF02817 e3 binding domain BAMF_0783 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) BAMF_0784 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain BAMF_0784 PF07992 Pyridine nucleotide-disulphide oxidoreductase BAMF_0785 PF01590 GAF domain BAMF_0785 PF00158 Sigma-54 interaction domain BAMF_0785 PF02954 Bacterial regulatory protein, Fis family BAMF_0786 PF08141 Small acid-soluble spore protein H family BAMF_0787 PF11975 Family 4 glycosyl hydrolase C-terminal domain BAMF_0787 PF02056 Family 4 glycosyl hydrolase BAMF_0788 PF01418 Helix-turn-helix domain, rpiR family BAMF_0788 PF01380 SIS domain BAMF_0789 PF00367 phosphotransferase system, EIIB BAMF_0789 PF02378 Phosphotransferase system, EIIC BAMF_0790 PF11962 Peptidase_G2, IMC autoproteolytic cleavage domain BAMF_0790 PF12708 Pectate lyase superfamily protein BAMF_0791 PF00005 ABC transporter BAMF_0791 PF00664 ABC transporter transmembrane region BAMF_0792 PF00005 ABC transporter BAMF_0792 PF00664 ABC transporter transmembrane region BAMF_0793 PF07681 DoxX BAMF_0794 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily BAMF_0795 PF01040 UbiA prenyltransferase family BAMF_0796 PF01040 UbiA prenyltransferase family BAMF_0797 PF03551 Transcriptional regulator PadR-like family BAMF_0797 PF10400 Virulence activator alpha C-term BAMF_0798 PF02525 Flavodoxin-like fold BAMF_0799 PF01757 Acyltransferase family BAMF_0800 PF01337 Barstar (barnase inhibitor) BAMF_0801 PF12867 DinB superfamily BAMF_0802 PF07690 Major Facilitator Superfamily BAMF_0803 PF01047 MarR family BAMF_0804 PF09924 Uncharacterised conserved protein (DUF2156) BAMF_0804 PF03706 Lysylphosphatidylglycerol synthase TM region BAMF_0805 PF02567 Phenazine biosynthesis-like protein BAMF_0806 PF00881 Nitroreductase family BAMF_0807 PF14151 YfhD-like protein BAMF_0808 PF14152 YfhE-like protein BAMF_0809 PF08338 Domain of unknown function (DUF1731) BAMF_0809 PF01370 NAD dependent epimerase/dehydratase family BAMF_0810 PF02631 RecX family BAMF_0811 PF08838 Protein of unknown function (DUF1811) BAMF_0812 PF07690 Major Facilitator Superfamily BAMF_0813 PF10794 Protein of unknown function (DUF2606) BAMF_0814 PF00089 Trypsin BAMF_0815 PF08176 Small acid-soluble spore protein K family BAMF_0816 PF14043 WVELL protein BAMF_0817 PF08239 Bacterial SH3 domain BAMF_0819 PF00561 alpha/beta hydrolase fold BAMF_0820 PF00561 alpha/beta hydrolase fold BAMF_0821 PF00561 alpha/beta hydrolase fold BAMF_0822 PF00535 Glycosyl transferase family 2 BAMF_0823 PF09586 Bacterial membrane protein YfhO BAMF_0824 PF04307 LexA-binding, inner membrane-associated putative hydrolase BAMF_0825 PF14659 Phage integrase, N-terminal SAM-like domain BAMF_0825 PF00589 Phage integrase family BAMF_0831 PF03374 Phage antirepressor protein KilAC domain BAMF_0831 PF09669 Phage regulatory protein Rha (Phage_pRha) BAMF_0836 PF03796 DnaB-like helicase C terminal domain BAMF_0836 PF00772 DnaB-like helicase N terminal domain BAMF_0840 PF08281 Sigma-70, region 4 BAMF_0848 PF00574 Clp protease BAMF_0864 PF10960 BhlA holin family BAMF_0865 PF04688 SPP1 phage holin BAMF_0866 PF01471 Putative peptidoglycan binding domain BAMF_0866 PF01510 N-acetylmuramoyl-L-alanine amidase BAMF_0869 PF18801 response regulator aspartate phosphatase H, N terminal BAMF_0870 PF18801 response regulator aspartate phosphatase H, N terminal BAMF_0871 PF00730 HhH-GPD superfamily base excision DNA repair protein BAMF_0871 PF14815 NUDIX domain BAMF_0874 PF04259 Small, acid-soluble spore protein, gamma-type BAMF_0875 PF14182 YgaB-like protein BAMF_0876 PF04167 Protein of unknown function (DUF402) BAMF_0877 PF00664 ABC transporter transmembrane region BAMF_0877 PF00005 ABC transporter BAMF_0878 PF06081 Aromatic acid exporter family member 1 BAMF_0879 PF00202 Aminotransferase class-III BAMF_0880 PF00578 AhpC/TSA family BAMF_0881 PF01475 Ferric uptake regulator family BAMF_0882 PF11023 Zinc-ribbon containing domain BAMF_0883 PF14540 Nucleotidyltransferase-like BAMF_0883 PF18576 Helix-turn-helix domain BAMF_0884 PF00589 Phage integrase family BAMF_0884 PF02899 Phage integrase, N-terminal SAM-like domain BAMF_0891 PF07319 Primosomal protein DnaI N-terminus BAMF_0891 PF01695 IstB-like ATP binding protein BAMF_0896 PF13443 Cro/C1-type HTH DNA-binding domain BAMF_0904 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain BAMF_0904 PF01367 5'-3' exonuclease, C-terminal SAM fold BAMF_0904 PF01612 3'-5' exonuclease BAMF_0904 PF00476 DNA polymerase family A BAMF_0911 PF07972 NrdI Flavodoxin like BAMF_0912 PF00317 Ribonucleotide reductase, all-alpha domain BAMF_0912 PF08343 Ribonucleotide reductase N-terminal BAMF_0912 PF02867 Ribonucleotide reductase, barrel domain BAMF_0914 PF08343 Ribonucleotide reductase N-terminal BAMF_0914 PF00317 Ribonucleotide reductase, all-alpha domain BAMF_0914 PF02867 Ribonucleotide reductase, barrel domain BAMF_0915 PF00268 Ribonucleotide reductase, small chain BAMF_0916 PF00692 dUTPase BAMF_0917 PF02511 Thymidylate synthase complementing protein BAMF_0921 PF00145 C-5 cytosine-specific DNA methylase BAMF_0923 PF04545 Sigma-70, region 4 BAMF_0923 PF04542 Sigma-70 region 2 BAMF_0926 PF01068 ATP dependent DNA ligase domain BAMF_0937 PF00589 Phage integrase family BAMF_0954 PF13457 GW (Gly-Tryp) dipeptide domain BAMF_0954 PF01832 Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase BAMF_0956 PF12708 Pectate lyase superfamily protein BAMF_0956 PF11962 Peptidase_G2, IMC autoproteolytic cleavage domain BAMF_0960 PF10960 BhlA holin family BAMF_0961 PF01471 Putative peptidoglycan binding domain BAMF_0961 PF01476 LysM domain BAMF_0961 PF01510 N-acetylmuramoyl-L-alanine amidase BAMF_0964 PF08863 YolD-like protein BAMF_0967 PF03553 Na+/H+ antiporter family BAMF_0968 PF03575 Peptidase family S51 BAMF_0969 PF13667 ThiC-associated domain BAMF_0969 PF01964 Radical SAM ThiC family BAMF_0970 PF01565 FAD binding domain BAMF_0970 PF08031 Berberine and berberine like BAMF_0971 PF13040 Fur-regulated basic protein B BAMF_0972 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle BAMF_0973 PF00528 Binding-protein-dependent transport system inner membrane component BAMF_0974 PF00528 Binding-protein-dependent transport system inner membrane component BAMF_0974 PF12911 N-terminal TM domain of oligopeptide transport permease C BAMF_0975 PF00005 ABC transporter BAMF_0975 PF08352 Oligopeptide/dipeptide transporter, C-terminal region BAMF_0976 PF08352 Oligopeptide/dipeptide transporter, C-terminal region BAMF_0976 PF00005 ABC transporter BAMF_0977 PF06628 Catalase-related immune-responsive BAMF_0977 PF00199 Catalase BAMF_0979 PF00005 ABC transporter BAMF_0980 PF09084 NMT1/THI5 like BAMF_0981 PF00528 Binding-protein-dependent transport system inner membrane component BAMF_0982 PF00296 Luciferase-like monooxygenase BAMF_0984 PF00253 Ribosomal protein S14p/S29e BAMF_0986 PF01381 Helix-turn-helix BAMF_0988 PF08331 Domain of unknown function (DUF1730) BAMF_0989 PF12671 Putative amidase domain BAMF_0990 PF00588 SpoU rRNA Methylase family BAMF_0991 PF13171 Protein of unknown function (DUF4004) BAMF_0992 PF04519 Polymer-forming cytoskeletal BAMF_0994 PF06798 PrkA serine protein kinase C-terminal domain BAMF_0994 PF08298 PrkA AAA domain BAMF_0995 PF04285 Protein of unknown function (DUF444) BAMF_0996 PF01047 MarR family BAMF_0998 PF07690 Major Facilitator Superfamily BAMF_0999 PF03358 NADPH-dependent FMN reductase BAMF_1002 PF00392 Bacterial regulatory proteins, gntR family BAMF_1003 PF00005 ABC transporter BAMF_1004 PF00005 ABC transporter BAMF_1005 PF12679 ABC-2 family transporter protein BAMF_1006 PF00313 'Cold-shock' DNA-binding domain BAMF_1007 PF03180 NLPA lipoprotein BAMF_1008 PF00990 Diguanylate cyclase, GGDEF domain BAMF_1008 PF07694 5TMR of 5TMR-LYT BAMF_1009 PF00375 Sodium:dicarboxylate symporter family BAMF_1010 PF01546 Peptidase family M20/M25/M40 BAMF_1012 PF09580 Sporulation lipoprotein YhcN/YlaJ (Spore_YhcN_YlaJ) BAMF_1014 PF07875 Coat F domain BAMF_1015 PF00149 Calcineurin-like phosphoesterase BAMF_1015 PF00746 LPXTG cell wall anchor motif BAMF_1015 PF00565 Staphylococcal nuclease homologue BAMF_1015 PF02872 5'-nucleotidase, C-terminal domain BAMF_1016 PF04203 Sortase domain BAMF_1017 PF00849 RNA pseudouridylate synthase BAMF_1017 PF01479 S4 domain BAMF_1018 PF17326 Family of unknown function (DUF5365) BAMF_1019 PF00571 CBS domain BAMF_1020 PF13419 Haloacid dehalogenase-like hydrolase BAMF_1021 PF00583 Acetyltransferase (GNAT) family BAMF_1021 PF00795 Carbon-nitrogen hydrolase BAMF_1022 PF00202 Aminotransferase class-III BAMF_1023 PF04309 Glycerol-3-phosphate responsive antiterminator BAMF_1024 PF00230 Major intrinsic protein BAMF_1025 PF02782 FGGY family of carbohydrate kinases, C-terminal domain BAMF_1025 PF00370 FGGY family of carbohydrate kinases, N-terminal domain BAMF_1026 PF01266 FAD dependent oxidoreductase BAMF_1026 PF16901 C-terminal domain of alpha-glycerophosphate oxidase BAMF_1027 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I BAMF_1027 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain BAMF_1027 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II BAMF_1027 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III BAMF_1028 PF07730 Histidine kinase BAMF_1028 PF13185 GAF domain BAMF_1029 PF00072 Response regulator receiver domain BAMF_1029 PF00196 Bacterial regulatory proteins, luxR family BAMF_1030 PF03358 NADPH-dependent FMN reductase BAMF_1031 PF14148 YhdB-like protein BAMF_1032 PF13028 Protein of unknown function (DUF3889) BAMF_1033 PF01476 LysM domain BAMF_1033 PF00877 NlpC/P60 family BAMF_1034 PF02082 Transcriptional regulator BAMF_1035 PF05552 Conserved TM helix BAMF_1036 PF04293 SpoVR like protein BAMF_1037 PF00245 Alkaline phosphatase BAMF_1038 PF00877 NlpC/P60 family BAMF_1038 PF01476 LysM domain BAMF_1039 PF03466 LysR substrate binding domain BAMF_1039 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family BAMF_1040 PF00285 Citrate synthase, C-terminal domain BAMF_1042 PF13520 Amino acid permease BAMF_1043 PF00209 Sodium:neurotransmitter symporter family BAMF_1044 PF17453 Sigma-M inhibitor BAMF_1045 PF13791 Sigma factor regulator C-terminal BAMF_1045 PF13800 Sigma factor regulator N-terminal BAMF_1046 PF08281 Sigma-70, region 4 BAMF_1046 PF04542 Sigma-70 region 2 BAMF_1047 PF01553 Acyltransferase BAMF_1048 PF03471 Transporter associated domain BAMF_1048 PF00571 CBS domain BAMF_1048 PF01595 Cyclin M transmembrane N-terminal domain BAMF_1049 PF13411 MerR HTH family regulatory protein BAMF_1050 PF00155 Aminotransferase class I and II BAMF_1051 PF02801 Beta-ketoacyl synthase, C-terminal domain BAMF_1051 PF00109 Beta-ketoacyl synthase, N-terminal domain BAMF_1052 PF03471 Transporter associated domain BAMF_1052 PF01595 Cyclin M transmembrane N-terminal domain BAMF_1052 PF00571 CBS domain BAMF_1053 PF02537 CrcB-like protein, Camphor Resistance (CrcB) BAMF_1054 PF02537 CrcB-like protein, Camphor Resistance (CrcB) BAMF_1055 PF03009 Glycerophosphoryl diester phosphodiesterase family BAMF_1056 PF17444 Uncharacterized YhdX-like BAMF_1057 PF00924 Mechanosensitive ion channel BAMF_1058 PF02146 Sir2 family BAMF_1059 PF01522 Polysaccharide deacetylase BAMF_1060 PF01063 Amino-transferase class IV BAMF_1061 PF00440 Bacterial regulatory proteins, tetR family BAMF_1061 PF13977 BetI-type transcriptional repressor, C-terminal BAMF_1063 PF00582 Universal stress protein family BAMF_1064 PF00664 ABC transporter transmembrane region BAMF_1064 PF00005 ABC transporter BAMF_1065 PF00005 ABC transporter BAMF_1065 PF00664 ABC transporter transmembrane region BAMF_1066 PF13460 NAD(P)H-binding BAMF_1067 PF00269 Small, acid-soluble spore proteins, alpha/beta type BAMF_1068 PF17277 Family of unknown function (DUF5342) BAMF_1069 PF14398 YheC/D like ATP-grasp BAMF_1070 PF14398 YheC/D like ATP-grasp BAMF_1071 PF04286 Protein of unknown function (DUF445) BAMF_1072 PF06133 Control of competence regulator ComK, YlbF/YmcA BAMF_1074 PF04055 Radical SAM superfamily BAMF_1075 PF13434 L-lysine 6-monooxygenase (NADPH-requiring) BAMF_1076 PF00999 Sodium/hydrogen exchanger family BAMF_1077 PF02080 TrkA-C domain BAMF_1079 PF00378 Enoyl-CoA hydratase/isomerase BAMF_1080 PF14120 YhzD-like protein BAMF_1081 PF00005 ABC transporter BAMF_1081 PF13732 Domain of unknown function (DUF4162) BAMF_1083 PF00149 Calcineurin-like phosphoesterase BAMF_1084 PF13514 AAA domain BAMF_1085 PF01966 HD domain BAMF_1086 PF14147 Sporulation protein YhaL BAMF_1088 PF09680 Family of unknown function BAMF_1090 PF11667 Putative zincin peptidase BAMF_1091 PF08963 Protein of unknown function (DUF1878) BAMF_1092 PF01047 MarR family BAMF_1093 PF12732 YtxH-like protein BAMF_1095 PF17099 Tryptophan transporter TrpP BAMF_1096 PF00266 Aminotransferase class-V BAMF_1097 PF01230 HIT domain BAMF_1098 PF00005 ABC transporter BAMF_1099 PF05975 Bacterial ABC transporter protein EcsB BAMF_1100 PF12787 EcsC protein family BAMF_1101 PF07687 Peptidase dimerisation domain BAMF_1101 PF01546 Peptidase family M20/M25/M40 BAMF_1103 PF03992 Antibiotic biosynthesis monooxygenase BAMF_1104 PF00912 Transglycosylase BAMF_1104 PF00905 Penicillin binding protein transpeptidase domain BAMF_1105 PF01208 Uroporphyrinogen decarboxylase (URO-D) BAMF_1108 PF17932 Tetracyclin repressor-like, C-terminal domain BAMF_1108 PF00440 Bacterial regulatory proteins, tetR family BAMF_1110 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III BAMF_1110 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal BAMF_1111 PF05343 M42 glutamyl aminopeptidase BAMF_1112 PF00375 Sodium:dicarboxylate symporter family BAMF_1113 PF12706 Beta-lactamase superfamily domain BAMF_1114 PF03099 Biotin/lipoate A/B protein ligase family BAMF_1114 PF10437 Bacterial lipoate protein ligase C-terminus BAMF_1115 PF13460 NAD(P)H-binding BAMF_1116 PF13193 AMP-binding enzyme C-terminal domain BAMF_1116 PF00501 AMP-binding enzyme BAMF_1118 PF16491 CAAX prenyl protease N-terminal, five membrane helices BAMF_1118 PF01435 Peptidase family M48 BAMF_1119 PF00082 Subtilase family BAMF_1119 PF05922 Peptidase inhibitor I9 BAMF_1120 PF01497 Periplasmic binding protein BAMF_1121 PF00300 Histidine phosphatase superfamily (branch 1) BAMF_1122 PF02803 Thiolase, C-terminal domain BAMF_1122 PF00108 Thiolase, N-terminal domain BAMF_1123 PF13193 AMP-binding enzyme C-terminal domain BAMF_1123 PF00501 AMP-binding enzyme BAMF_1124 PF02632 BioY family BAMF_1125 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain BAMF_1126 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain BAMF_1127 PF01266 FAD dependent oxidoreductase BAMF_1127 PF00355 Rieske [2Fe-2S] domain BAMF_1129 PF08858 IDEAL domain BAMF_1130 PF06338 ComK protein BAMF_1131 PF08818 Domain of unknown function (DU1801) BAMF_1133 PF15493 Domain of unknown function, YrpD BAMF_1134 PF05901 Excalibur calcium-binding domain BAMF_1135 PF01906 Putative heavy-metal-binding BAMF_1136 PF00474 Sodium:solute symporter family BAMF_1137 PF11755 Protein of unknown function (DUF3311) BAMF_1139 PF09335 SNARE associated Golgi protein BAMF_1140 PF10502 Signal peptidase, peptidase S26 BAMF_1141 PF01494 FAD binding domain BAMF_1142 PF01047 MarR family BAMF_1143 PF05145 Transition state regulatory protein AbrB BAMF_1144 PF07690 Major Facilitator Superfamily BAMF_1145 PF08361 MAATS-type transcriptional repressor, C-terminal region BAMF_1145 PF00440 Bacterial regulatory proteins, tetR family BAMF_1146 PF02915 Rubrerythrin BAMF_1147 PF04239 Protein of unknown function (DUF421) BAMF_1148 PF13361 UvrD-like helicase C-terminal domain BAMF_1148 PF12705 PD-(D/E)XK nuclease superfamily BAMF_1149 PF13361 UvrD-like helicase C-terminal domain BAMF_1149 PF00580 UvrD/REP helicase N-terminal domain BAMF_1149 PF12705 PD-(D/E)XK nuclease superfamily BAMF_1150 PF00149 Calcineurin-like phosphoesterase BAMF_1150 PF12320 Type 5 capsule protein repressor C-terminal domain BAMF_1151 PF13476 AAA domain BAMF_1153 PF10676 Spore germination protein gerPA/gerPF BAMF_1154 PF10970 Spore germination protein GerPE BAMF_1156 PF10737 Spore germination protein GerPC BAMF_1157 PF10803 Spore germination GerPB BAMF_1158 PF10676 Spore germination protein gerPA/gerPF BAMF_1159 PF09388 Spo0E like sporulation regulatory protein BAMF_1160 PF01557 Fumarylacetoacetate (FAA) hydrolase family BAMF_1161 PF07457 Protein of unknown function (DUF1516) BAMF_1162 PF17936 Bacterial Ig domain BAMF_1162 PF00082 Subtilase family BAMF_1163 PF10949 Protein of unknown function (DUF2777) BAMF_1164 PF13537 Glutamine amidotransferase domain BAMF_1164 PF00733 Asparagine synthase BAMF_1166 PF01554 MatE BAMF_1167 PF02311 AraC-like ligand binding domain BAMF_1167 PF12833 Helix-turn-helix domain BAMF_1168 PF00356 Bacterial regulatory proteins, lacI family BAMF_1169 PF02894 Oxidoreductase family, C-terminal alpha/beta domain BAMF_1169 PF01408 Oxidoreductase family, NAD-binding Rossmann fold BAMF_1170 PF05163 DinB family BAMF_1171 PF01810 LysE type translocator BAMF_1172 PF00155 Aminotransferase class I and II BAMF_1172 PF00392 Bacterial regulatory proteins, gntR family BAMF_1173 PF13599 Pentapeptide repeats (9 copies) BAMF_1174 PF13673 Acetyltransferase (GNAT) domain BAMF_1175 PF02574 Homocysteine S-methyltransferase BAMF_1175 PF02219 Methylenetetrahydrofolate reductase BAMF_1176 PF04461 Protein of unknown function (DUF520) BAMF_1177 PF17783 CvfB-like winged helix domain BAMF_1177 PF13509 S1 domain BAMF_1179 PF00672 HAMP domain BAMF_1179 PF12729 Four helix bundle sensory module for signal transduction BAMF_1179 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain BAMF_1180 PF00067 Cytochrome P450 BAMF_1181 PF02645 Uncharacterised protein, DegV family COG1307 BAMF_1182 PF10035 Uncharacterized protein conserved in bacteria (DUF2179) BAMF_1182 PF02588 Uncharacterised 5xTM membrane BCR, YitT family COG1284 BAMF_1183 PF12690 Intracellular proteinase inhibitor BAMF_1184 PF12758 Protein of unknown function (DUF3813) BAMF_1187 PF00326 Prolyl oligopeptidase family BAMF_1188 PF01883 Iron-sulfur cluster assembly protein BAMF_1189 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily BAMF_1190 PF01565 FAD binding domain BAMF_1191 PF07690 Major Facilitator Superfamily BAMF_1192 PF01118 Semialdehyde dehydrogenase, NAD binding domain BAMF_1192 PF02774 Semialdehyde dehydrogenase, dimerisation domain BAMF_1193 PF01960 ArgJ family BAMF_1194 PF00696 Amino acid kinase family BAMF_1195 PF00202 Aminotransferase class-III BAMF_1196 PF00117 Glutamine amidotransferase class-I BAMF_1196 PF00988 Carbamoyl-phosphate synthase small chain, CPSase domain BAMF_1197 PF02787 Carbamoyl-phosphate synthetase large chain, oligomerisation domain BAMF_1197 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain BAMF_1198 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain BAMF_1198 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain BAMF_1199 PF14168 YjzC-like protein BAMF_1200 PF11151 Protein of unknown function (DUF2929) BAMF_1203 PF02608 ABC transporter substrate-binding protein PnrA-like BAMF_1204 PF10815 ComZ BAMF_1206 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III BAMF_1206 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal BAMF_1207 PF00109 Beta-ketoacyl synthase, N-terminal domain BAMF_1207 PF02801 Beta-ketoacyl synthase, C-terminal domain BAMF_1208 PF10026 Predicted Zn-dependent protease (DUF2268) BAMF_1209 PF08352 Oligopeptide/dipeptide transporter, C-terminal region BAMF_1209 PF00005 ABC transporter BAMF_1210 PF08352 Oligopeptide/dipeptide transporter, C-terminal region BAMF_1210 PF00005 ABC transporter BAMF_1211 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle BAMF_1212 PF00528 Binding-protein-dependent transport system inner membrane component BAMF_1213 PF00528 Binding-protein-dependent transport system inner membrane component BAMF_1213 PF12911 N-terminal TM domain of oligopeptide transport permease C BAMF_1214 PF12227 Protein of unknown function (DUF3603) BAMF_1215 PF00579 tRNA synthetases class I (W and Y) BAMF_1216 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle BAMF_1217 PF00528 Binding-protein-dependent transport system inner membrane component BAMF_1218 PF12911 N-terminal TM domain of oligopeptide transport permease C BAMF_1218 PF00528 Binding-protein-dependent transport system inner membrane component BAMF_1219 PF08352 Oligopeptide/dipeptide transporter, C-terminal region BAMF_1219 PF00005 ABC transporter BAMF_1220 PF00005 ABC transporter BAMF_1220 PF08352 Oligopeptide/dipeptide transporter, C-terminal region BAMF_1222 PF13508 Acetyltransferase (GNAT) domain BAMF_1223 PF03960 ArsC family BAMF_1224 PF03741 Integral membrane protein TerC family BAMF_1225 PF05389 Negative regulator of genetic competence (MecA) BAMF_1226 PF06054 Competence protein CoiA-like family BAMF_1227 PF08439 Oligopeptidase F BAMF_1227 PF01432 Peptidase family M3 BAMF_1230 PF01152 Bacterial-like globin BAMF_1231 PF01464 Transglycosylase SLT domain BAMF_1232 PF01928 CYTH domain BAMF_1234 PF04607 Region found in RelA / SpoT proteins BAMF_1235 PF01513 ATP-NAD kinase BAMF_1236 PF00849 RNA pseudouridylate synthase BAMF_1237 PF00149 Calcineurin-like phosphoesterase BAMF_1238 PF00999 Sodium/hydrogen exchanger family BAMF_1238 PF02080 TrkA-C domain BAMF_1238 PF02254 TrkA-N domain BAMF_1239 PF03070 TENA/THI-4/PQQC family BAMF_1240 PF02581 Thiamine monophosphate synthase BAMF_1241 PF01266 FAD dependent oxidoreductase BAMF_1242 PF02597 ThiS family BAMF_1243 PF05690 Thiazole biosynthesis protein ThiG BAMF_1244 PF00899 ThiF family BAMF_1245 PF08543 Phosphomethylpyrimidine kinase BAMF_1247 PF14153 Spore coat protein CotO BAMF_1248 PF10612 Spore coat protein Z BAMF_1249 PF10612 Spore coat protein Z BAMF_1250 PF07552 Spore Coat Protein X and V domain BAMF_1252 PF07552 Spore Coat Protein X and V domain BAMF_1253 PF07098 Protein of unknown function (DUF1360) BAMF_1256 PF14069 Stage VI sporulation protein F BAMF_1257 PF00580 UvrD/REP helicase N-terminal domain BAMF_1257 PF13361 UvrD-like helicase C-terminal domain BAMF_1259 PF00753 Metallo-beta-lactamase superfamily BAMF_1261 PF00005 ABC transporter BAMF_1263 PF13673 Acetyltransferase (GNAT) domain BAMF_1265 PF00756 Putative esterase BAMF_1266 PF01053 Cys/Met metabolism PLP-dependent enzyme BAMF_1267 PF01053 Cys/Met metabolism PLP-dependent enzyme BAMF_1270 PF09346 SMI1 / KNR4 family (SUKH-1) BAMF_1275 PF07693 KAP family P-loop domain BAMF_1276 PF07693 KAP family P-loop domain BAMF_1277 PF07693 KAP family P-loop domain BAMF_1279 PF08863 YolD-like protein BAMF_1280 PF11799 impB/mucB/samB family C-terminal domain BAMF_1280 PF11798 IMS family HHH motif BAMF_1280 PF00817 impB/mucB/samB family BAMF_1282 PF14037 YoqO-like protein BAMF_1285 PF18593 CdiI immunity protein BAMF_1289 PF03992 Antibiotic biosynthesis monooxygenase BAMF_1290 PF07690 Major Facilitator Superfamily BAMF_1291 PF01047 MarR family BAMF_1292 PF07745 Glycosyl hydrolase family 53 BAMF_1294 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit BAMF_1294 PF02378 Phosphotransferase system, EIIC BAMF_1295 PF02255 PTS system, Lactose/Cellobiose specific IIA subunit BAMF_1296 PF00232 Glycosyl hydrolase family 1 BAMF_1297 PF08220 DeoR-like helix-turn-helix domain BAMF_1297 PF00455 DeoR C terminal sensor domain BAMF_1301 PF02308 MgtC family BAMF_1302 PF14070 Putative motility protein BAMF_1303 PF10990 Protein of unknown function (DUF2809) BAMF_1304 PF14172 Domain of unknown function (DUF4309) BAMF_1305 PF00384 Molybdopterin oxidoreductase BAMF_1305 PF01568 Molydopterin dinucleotide binding domain BAMF_1305 PF10588 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region BAMF_1305 PF12838 4Fe-4S dicluster domain BAMF_1305 PF04879 Molybdopterin oxidoreductase Fe4S4 domain BAMF_1306 PF03649 Uncharacterised protein family (UPF0014) BAMF_1307 PF02602 Uroporphyrinogen-III synthase HemD BAMF_1309 PF04101 Glycosyltransferase family 28 C-terminal domain BAMF_1310 PF00067 Cytochrome P450 BAMF_1311 PF07849 Protein of unknown function (DUF1641) BAMF_1312 PF04879 Molybdopterin oxidoreductase Fe4S4 domain BAMF_1312 PF10588 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region BAMF_1312 PF01568 Molydopterin dinucleotide binding domain BAMF_1312 PF12838 4Fe-4S dicluster domain BAMF_1312 PF00384 Molybdopterin oxidoreductase BAMF_1313 PF00384 Molybdopterin oxidoreductase BAMF_1313 PF01568 Molydopterin dinucleotide binding domain BAMF_1313 PF04879 Molybdopterin oxidoreductase Fe4S4 domain BAMF_1313 PF10588 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region BAMF_1313 PF12838 4Fe-4S dicluster domain BAMF_1314 PF00005 ABC transporter BAMF_1315 PF13536 Putative multidrug resistance efflux transporter BAMF_1317 PF07849 Protein of unknown function (DUF1641) BAMF_1318 PF07992 Pyridine nucleotide-disulphide oxidoreductase BAMF_1319 PF02614 Glucuronate isomerase BAMF_1320 PF00356 Bacterial regulatory proteins, lacI family BAMF_1322 PF08666 SAF domain BAMF_1322 PF04295 D-galactarate dehydratase / Altronate hydrolase, C terminus BAMF_1323 PF00486 Transcriptional regulatory protein, C terminal BAMF_1323 PF00072 Response regulator receiver domain BAMF_1324 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BAMF_1324 PF00989 PAS fold BAMF_1324 PF00512 His Kinase A (phospho-acceptor) domain BAMF_1324 PF18698 Histidine kinase sensor domain BAMF_1324 PF00672 HAMP domain BAMF_1325 PF01925 Sulfite exporter TauE/SafE BAMF_1326 PF05163 DinB family BAMF_1327 PF18801 response regulator aspartate phosphatase H, N terminal BAMF_1329 PF01476 LysM domain BAMF_1329 PF01510 N-acetylmuramoyl-L-alanine amidase BAMF_1329 PF01471 Putative peptidoglycan binding domain BAMF_1330 PF08000 Bacterial PH domain BAMF_1331 PF05908 Poly-gamma-glutamate hydrolase BAMF_1332 PF06114 IrrE N-terminal-like domain BAMF_1333 PF01381 Helix-turn-helix BAMF_1336 PF01695 IstB-like ATP binding protein BAMF_1339 PF17356 Phage-like element PBSX protein XtrA BAMF_1340 PF08281 Sigma-70, region 4 BAMF_1341 PF03592 Terminase small subunit BAMF_1341 PF10668 Phage terminase small subunit BAMF_1342 PF04466 Phage terminase large subunit BAMF_1342 PF17288 Terminase RNAseH like domain BAMF_1343 PF04860 Phage portal protein BAMF_1344 PF14550 Putative phage serine protease XkdF BAMF_1345 PF05065 Phage capsid family BAMF_1346 PF12206 Domain of unknown function (DUF3599) BAMF_1347 PF04883 Bacteriophage HK97-gp10, putative tail-component BAMF_1350 PF17482 Phage tail sheath C-terminal domain BAMF_1350 PF04984 Phage tail sheath protein subtilisin-like domain BAMF_1350 PF17481 Phage tail sheath protein beta-sandwich domain BAMF_1351 PF09393 Phage tail tube protein BAMF_1352 PF08890 Phage XkdN-like tail assembly chaperone protein, TAC BAMF_1354 PF01464 Transglycosylase SLT domain BAMF_1355 PF01464 Transglycosylase SLT domain BAMF_1355 PF01464 Transglycosylase SLT domain BAMF_1356 PF01476 LysM domain BAMF_1358 PF10844 Protein of unknown function (DUF2577) BAMF_1359 PF10934 Protein of unknown function (DUF2634) BAMF_1360 PF04865 Baseplate J-like protein BAMF_1361 PF10076 Uncharacterised protein conserved in bacteria (DUF2313) BAMF_1365 PF09693 Phage uncharacterised protein (Phage_XkdX) BAMF_1367 PF10779 Haemolysin XhlA BAMF_1368 PF04688 SPP1 phage holin BAMF_1369 PF01471 Putative peptidoglycan binding domain BAMF_1369 PF01476 LysM domain BAMF_1369 PF01510 N-acetylmuramoyl-L-alanine amidase BAMF_1370 PF14185 Antitoxin SpoIISB, type II toxin-antitoxin system BAMF_1371 PF14171 Toxin SpoIISA, type II toxin-antitoxin system BAMF_1372 PF01384 Phosphate transporter family BAMF_1373 PF01865 Protein of unknown function DUF47 BAMF_1374 PF13520 Amino acid permease BAMF_1375 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily BAMF_1376 PF13231 Dolichyl-phosphate-mannose-protein mannosyltransferase BAMF_1377 PF00535 Glycosyl transferase family 2 BAMF_1378 PF13180 PDZ domain BAMF_1379 PF07690 Major Facilitator Superfamily BAMF_1380 PF04951 D-aminopeptidase BAMF_1381 PF00528 Binding-protein-dependent transport system inner membrane component BAMF_1382 PF00528 Binding-protein-dependent transport system inner membrane component BAMF_1382 PF12911 N-terminal TM domain of oligopeptide transport permease C BAMF_1383 PF00005 ABC transporter BAMF_1383 PF08352 Oligopeptide/dipeptide transporter, C-terminal region BAMF_1384 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle BAMF_1385 PF17676 LD-carboxypeptidase C-terminal domain BAMF_1385 PF02016 LD-carboxypeptidase N-terminal domain BAMF_1386 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain BAMF_1386 PF13378 Enolase C-terminal domain-like BAMF_1387 PF00877 NlpC/P60 family BAMF_1388 PF00005 ABC transporter BAMF_1388 PF08352 Oligopeptide/dipeptide transporter, C-terminal region BAMF_1389 PF10282 Lactonase, 7-bladed beta-propeller BAMF_1391 PF03061 Thioesterase superfamily BAMF_1392 PF13302 Acetyltransferase (GNAT) domain BAMF_1393 PF00893 Small Multidrug Resistance protein BAMF_1394 PF00893 Small Multidrug Resistance protein BAMF_1395 PF00551 Formyl transferase BAMF_1395 PF01842 ACT domain BAMF_1396 PF00696 Amino acid kinase family BAMF_1396 PF01472 PUA domain BAMF_1397 PF00171 Aldehyde dehydrogenase family BAMF_1398 PF02566 OsmC-like protein BAMF_1399 PF01047 MarR family BAMF_1400 PF02566 OsmC-like protein BAMF_1403 PF13181 Tetratricopeptide repeat BAMF_1403 PF00535 Glycosyl transferase family 2 BAMF_1405 PF12832 MFS_1 like family BAMF_1406 PF00027 Cyclic nucleotide-binding domain BAMF_1407 PF08267 Cobalamin-independent synthase, N-terminal domain BAMF_1407 PF01717 Cobalamin-independent synthase, Catalytic domain BAMF_1408 PF00082 Subtilase family BAMF_1409 PF01740 STAS domain BAMF_1410 PF02361 Cobalt transport protein BAMF_1411 PF00005 ABC transporter BAMF_1412 PF09819 ABC-type cobalt transport system, permease component BAMF_1413 PF01476 LysM domain BAMF_1413 PF00704 Glycosyl hydrolases family 18 BAMF_1414 PF11132 Transcriptional regulator protein (SplA) BAMF_1415 PF01769 Divalent cation transporter BAMF_1415 PF03448 MgtE intracellular N domain BAMF_1415 PF00571 CBS domain BAMF_1416 PF13411 MerR HTH family regulatory protein BAMF_1419 PF01047 MarR family BAMF_1421 PF01068 ATP dependent DNA ligase domain BAMF_1422 PF02735 Ku70/Ku80 beta-barrel domain BAMF_1423 PF00563 EAL domain BAMF_1423 PF00990 Diguanylate cyclase, GGDEF domain BAMF_1423 PF03707 Bacterial signalling protein N terminal repeat BAMF_1424 PF09335 SNARE associated Golgi protein BAMF_1425 PF03741 Integral membrane protein TerC family BAMF_1426 PF04542 Sigma-70 region 2 BAMF_1427 PF12791 Anti-sigma factor N-terminus BAMF_1428 PF00269 Small, acid-soluble spore proteins, alpha/beta type BAMF_1429 PF08876 Domain of unknown function (DUF1836) BAMF_1430 PF01435 Peptidase family M48 BAMF_1431 PF02386 Cation transport protein BAMF_1432 PF04239 Protein of unknown function (DUF421) BAMF_1434 PF01757 Acyltransferase family BAMF_1435 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BAMF_1435 PF00512 His Kinase A (phospho-acceptor) domain BAMF_1435 PF00989 PAS fold BAMF_1435 PF13188 PAS domain BAMF_1435 PF13426 PAS domain BAMF_1436 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain BAMF_1436 PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain BAMF_1437 PF01008 Initiation factor 2 subunit family BAMF_1438 PF01636 Phosphotransferase enzyme family BAMF_1439 PF00795 Carbon-nitrogen hydrolase BAMF_1440 PF00155 Aminotransferase class I and II BAMF_1441 PF02788 Ribulose bisphosphate carboxylase large chain, N-terminal domain BAMF_1441 PF00016 Ribulose bisphosphate carboxylase large chain, catalytic domain BAMF_1442 PF00596 Class II Aldolase and Adducin N-terminal domain BAMF_1443 PF03079 ARD/ARD' family BAMF_1444 PF09388 Spo0E like sporulation regulatory protein BAMF_1445 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BAMF_1445 PF00512 His Kinase A (phospho-acceptor) domain BAMF_1445 PF02743 Cache domain BAMF_1446 PF01047 MarR family BAMF_1447 PF00691 OmpA family BAMF_1447 PF13677 Membrane MotB of proton-channel complex MotA/MotB BAMF_1448 PF01618 MotA/TolQ/ExbB proton channel family BAMF_1449 PF10431 C-terminal, D2-small domain, of ClpB protein BAMF_1449 PF00004 ATPase family associated with various cellular activities (AAA) BAMF_1449 PF07724 AAA domain (Cdc48 subfamily) BAMF_1449 PF17871 AAA lid domain BAMF_1452 PF06508 Queuosine biosynthesis protein QueC BAMF_1453 PF01242 6-pyruvoyl tetrahydropterin synthase BAMF_1454 PF04055 Radical SAM superfamily BAMF_1455 PF14489 QueF-like protein BAMF_1456 PF11514 Protein of unknown function (DUF3219) BAMF_1457 PF09953 Uncharacterized protein conserved in bacteria (DUF2187) BAMF_1459 PF07486 Cell Wall Hydrolase BAMF_1460 PF01943 Polysaccharide biosynthesis protein BAMF_1461 PF00578 AhpC/TSA family BAMF_1463 PF01321 Creatinase/Prolidase N-terminal domain BAMF_1463 PF00557 Metallopeptidase family M24 BAMF_1464 PF00356 Bacterial regulatory proteins, lacI family BAMF_1464 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family BAMF_1465 PF00874 PRD domain BAMF_1465 PF03123 CAT RNA binding domain BAMF_1466 PF00367 phosphotransferase system, EIIB BAMF_1466 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 BAMF_1466 PF02378 Phosphotransferase system, EIIC BAMF_1467 PF00381 PTS HPr component phosphorylation site BAMF_1468 PF02896 PEP-utilising enzyme, TIM barrel domain BAMF_1468 PF05524 PEP-utilising enzyme, N-terminal BAMF_1468 PF00391 PEP-utilising enzyme, mobile domain BAMF_1469 PF11132 Transcriptional regulator protein (SplA) BAMF_1471 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain BAMF_1471 PF02743 Cache domain BAMF_1471 PF00672 HAMP domain BAMF_1472 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase BAMF_1472 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase BAMF_1473 PF00188 Cysteine-rich secretory protein family BAMF_1474 PF03717 Penicillin-binding Protein dimerisation domain BAMF_1474 PF00905 Penicillin binding protein transpeptidase domain BAMF_1475 PF00512 His Kinase A (phospho-acceptor) domain BAMF_1475 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BAMF_1475 PF08447 PAS fold BAMF_1475 PF00989 PAS fold BAMF_1476 PF00155 Aminotransferase class I and II BAMF_1478 PF01584 CheW-like domain BAMF_1478 PF00072 Response regulator receiver domain BAMF_1479 PF14177 YkyB-like protein BAMF_1480 PF07690 Major Facilitator Superfamily BAMF_1481 PF01476 LysM domain BAMF_1481 PF03734 L,D-transpeptidase catalytic domain BAMF_1482 PF10518 TAT (twin-arginine translocation) pathway signal sequence BAMF_1482 PF00149 Calcineurin-like phosphoesterase BAMF_1485 PF00563 EAL domain BAMF_1485 PF10388 EAL-domain associated signalling protein domain BAMF_1486 PF08796 Protein of unknown function (DUF1797) BAMF_1487 PF04308 Ribonuclease H-like BAMF_1488 PF14156 Antirepressor AbbA BAMF_1490 PF03466 LysR substrate binding domain BAMF_1490 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family BAMF_1491 PF00258 Flavodoxin BAMF_1493 PF00258 Flavodoxin BAMF_1494 PF08503 Tetrahydrodipicolinate succinyltransferase N-terminal BAMF_1494 PF00132 Bacterial transferase hexapeptide (six repeats) BAMF_1494 PF14602 Hexapeptide repeat of succinyl-transferase BAMF_1495 PF01546 Peptidase family M20/M25/M40 BAMF_1495 PF07687 Peptidase dimerisation domain BAMF_1496 PF03698 Uncharacterised protein family (UPF0180) BAMF_1497 PF00924 Mechanosensitive ion channel BAMF_1498 PF00578 AhpC/TSA family BAMF_1499 PF00578 AhpC/TSA family BAMF_1502 PF12804 MobA-like NTP transferase domain BAMF_1503 PF00899 ThiF family BAMF_1504 PF03453 MoeA N-terminal region (domain I and II) BAMF_1504 PF03454 MoeA C-terminal region (domain IV) BAMF_1504 PF00994 Probable molybdopterin binding domain BAMF_1505 PF03205 Molybdopterin guanine dinucleotide synthesis protein B BAMF_1506 PF02391 MoaE protein BAMF_1507 PF02597 ThiS family BAMF_1508 PF04893 Yip1 domain BAMF_1509 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion BAMF_1510 PF00005 ABC transporter BAMF_1511 PF02687 FtsX-like permease family BAMF_1511 PF12704 MacB-like periplasmic core domain BAMF_1512 PF08220 DeoR-like helix-turn-helix domain BAMF_1512 PF00455 DeoR C terminal sensor domain BAMF_1513 PF00294 pfkB family carbohydrate kinase BAMF_1514 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit BAMF_1514 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 BAMF_1515 PF10502 Signal peptidase, peptidase S26 BAMF_1517 PF00005 ABC transporter BAMF_1517 PF12848 ABC transporter BAMF_1518 PF08546 Ketopantoate reductase PanE/ApbA C terminal BAMF_1518 PF02558 Ketopantoate reductase PanE/ApbA BAMF_1519 PF02073 Thermophilic metalloprotease (M29) BAMF_1520 PF17447 Uncharacterized YkpC-like BAMF_1522 PF18277 AbrB C-terminal domain BAMF_1522 PF04014 Antidote-toxin recognition MazE, bacterial antitoxin BAMF_1523 PF00989 PAS fold BAMF_1523 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BAMF_1523 PF00512 His Kinase A (phospho-acceptor) domain BAMF_1524 PF06094 Gamma-glutamyl cyclotransferase, AIG2-like BAMF_1525 PF02254 TrkA-N domain BAMF_1525 PF02080 TrkA-C domain BAMF_1526 PF01979 Amidohydrolase family BAMF_1526 PF13382 Adenine deaminase C-terminal domain BAMF_1527 PF00753 Metallo-beta-lactamase superfamily BAMF_1527 PF17770 Ribonuclease J C-terminal domain BAMF_1527 PF07521 Zn-dependent metallo-hydrolase RNA specificity domain BAMF_1530 PF01327 Polypeptide deformylase BAMF_1532 PF10368 Putative cell-wall binding lipoprotein BAMF_1533 PF00676 Dehydrogenase E1 component BAMF_1534 PF02780 Transketolase, C-terminal domain BAMF_1534 PF02779 Transketolase, pyrimidine binding domain BAMF_1535 PF02817 e3 binding domain BAMF_1535 PF00364 Biotin-requiring enzyme BAMF_1535 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) BAMF_1536 PF07992 Pyridine nucleotide-disulphide oxidoreductase BAMF_1536 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain BAMF_1538 PF01522 Polysaccharide deacetylase BAMF_1538 PF03422 Carbohydrate binding module (family 6) BAMF_1538 PF00457 Glycosyl hydrolases family 11 BAMF_1539 PF13790 SR1 protein BAMF_1540 PF01276 Orn/Lys/Arg decarboxylase, major domain BAMF_1540 PF03711 Orn/Lys/Arg decarboxylase, C-terminal domain BAMF_1541 PF05256 Uncharacterised protein family (UPF0223) BAMF_1542 PF06335 Protein of unknown function (DUF1054) BAMF_1544 PF00459 Inositol monophosphatase family BAMF_1545 PF00583 Acetyltransferase (GNAT) family BAMF_1546 PF01447 Thermolysin metallopeptidase, catalytic domain BAMF_1546 PF07504 Fungalysin/Thermolysin Propeptide Motif BAMF_1546 PF02868 Thermolysin metallopeptidase, alpha-helical domain BAMF_1546 PF03413 Peptidase propeptide and YPEB domain BAMF_1548 PF13490 Putative zinc-finger BAMF_1550 PF17259 Family of unknown function (DUF5325) BAMF_1552 PF14036 YlaH-like protein BAMF_1553 PF09963 Uncharacterized protein conserved in bacteria (DUF2197) BAMF_1554 PF09580 Sporulation lipoprotein YhcN/YlaJ (Spore_YhcN_YlaJ) BAMF_1555 PF13638 PIN domain BAMF_1555 PF02562 PhoH-like protein BAMF_1557 PF04960 Glutaminase BAMF_1558 PF07408 Protein of unknown function (DUF1507) BAMF_1559 PF01098 Cell cycle protein BAMF_1560 PF00289 Biotin carboxylase, N-terminal domain BAMF_1560 PF00364 Biotin-requiring enzyme BAMF_1560 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain BAMF_1560 PF00682 HMGL-like BAMF_1560 PF02436 Conserved carboxylase domain BAMF_1560 PF02785 Biotin carboxylase C-terminal domain BAMF_1561 PF02628 Cytochrome oxidase assembly protein BAMF_1562 PF01040 UbiA prenyltransferase family BAMF_1563 PF00034 Cytochrome c BAMF_1563 PF00116 Cytochrome C oxidase subunit II, periplasmic domain BAMF_1563 PF02790 Cytochrome C oxidase subunit II, transmembrane domain BAMF_1564 PF00115 Cytochrome C and Quinol oxidase polypeptide I BAMF_1565 PF00510 Cytochrome c oxidase subunit III BAMF_1566 PF03626 Prokaryotic Cytochrome C oxidase subunit IV BAMF_1567 PF09678 Cytochrome c oxidase caa3 assembly factor (Caa3_CtaG) BAMF_1568 PF08868 YugN-like family BAMF_1569 PF00571 CBS domain BAMF_1570 PF00188 Cysteine-rich secretory protein family BAMF_1570 PF14504 CAP-associated N-terminal BAMF_1571 PF14071 Putative coat protein BAMF_1572 PF14003 YlbE-like protein BAMF_1573 PF06133 Control of competence regulator ComK, YlbF/YmcA BAMF_1574 PF09902 Uncharacterized protein conserved in bacteria (DUF2129) BAMF_1576 PF01467 Cytidylyltransferase-like BAMF_1577 PF07670 Nucleoside recognition BAMF_1578 PF01734 Patatin-like phospholipase BAMF_1579 PF05362 Lon protease (S16) C-terminal proteolytic domain BAMF_1579 PF13180 PDZ domain BAMF_1580 PF05636 HIGH Nucleotidyl Transferase BAMF_1581 PF02620 Large ribosomal RNA subunit accumulation protein YceD BAMF_1582 PF01783 Ribosomal L32p protein family BAMF_1584 PF00583 Acetyltransferase (GNAT) family BAMF_1585 PF02558 Ketopantoate reductase PanE/ApbA BAMF_1585 PF08546 Ketopantoate reductase PanE/ApbA C terminal BAMF_1586 PF10079 Bacillithiol biosynthesis BshC BAMF_1587 PF02381 MraZ protein, putative antitoxin-like BAMF_1588 PF01795 MraW methylase family BAMF_1591 PF03793 PASTA domain BAMF_1591 PF00905 Penicillin binding protein transpeptidase domain BAMF_1591 PF03717 Penicillin-binding Protein dimerisation domain BAMF_1592 PF01225 Mur ligase family, catalytic domain BAMF_1592 PF02875 Mur ligase family, glutamate ligase domain BAMF_1592 PF08245 Mur ligase middle domain BAMF_1593 PF00953 Glycosyl transferase family 4 BAMF_1593 PF10555 Phospho-N-acetylmuramoyl-pentapeptide-transferase signature 1 BAMF_1594 PF02875 Mur ligase family, glutamate ligase domain BAMF_1594 PF08245 Mur ligase middle domain BAMF_1595 PF01098 Cell cycle protein BAMF_1596 PF04101 Glycosyltransferase family 28 C-terminal domain BAMF_1596 PF03033 Glycosyltransferase family 28 N-terminal domain BAMF_1597 PF01565 FAD binding domain BAMF_1597 PF02873 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain BAMF_1598 PF08478 POTRA domain, FtsQ-type BAMF_1599 PF02491 SHS2 domain inserted in FTSA BAMF_1600 PF12327 FtsZ family, C-terminal domain BAMF_1600 PF00091 Tubulin/FtsZ family, GTPase domain BAMF_1601 PF00082 Subtilase family BAMF_1601 PF05922 Peptidase inhibitor I9 BAMF_1602 PF03419 Sporulation factor SpoIIGA BAMF_1603 PF04542 Sigma-70 region 2 BAMF_1603 PF04545 Sigma-70, region 4 BAMF_1604 PF04542 Sigma-70 region 2 BAMF_1604 PF04539 Sigma-70 region 3 BAMF_1604 PF04545 Sigma-70, region 4 BAMF_1605 PF00005 ABC transporter BAMF_1606 PF01546 Peptidase family M20/M25/M40 BAMF_1606 PF07687 Peptidase dimerisation domain BAMF_1607 PF05239 PRC-barrel domain BAMF_1609 PF01168 Alanine racemase, N-terminal domain BAMF_1610 PF04472 Cell division protein SepF BAMF_1611 PF02325 YGGT family BAMF_1612 PF01479 S4 domain BAMF_1612 PF17774 Putative RNA-binding domain in YlmH BAMF_1613 PF05103 DivIVA protein BAMF_1614 PF00133 tRNA synthetases class I (I, L, M and V) BAMF_1614 PF08264 Anticodon-binding domain of tRNA BAMF_1615 PF01258 Prokaryotic dksA/traR C4-type zinc finger BAMF_1616 PF01252 Signal peptidase (SPase) II BAMF_1617 PF01479 S4 domain BAMF_1617 PF00849 RNA pseudouridylate synthase BAMF_1618 PF00156 Phosphoribosyl transferase domain BAMF_1619 PF00860 Permease family BAMF_1620 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain BAMF_1620 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain BAMF_1621 PF01979 Amidohydrolase family BAMF_1622 PF00988 Carbamoyl-phosphate synthase small chain, CPSase domain BAMF_1622 PF00117 Glutamine amidotransferase class-I BAMF_1623 PF02142 MGS-like domain BAMF_1623 PF02787 Carbamoyl-phosphate synthetase large chain, oligomerisation domain BAMF_1623 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain BAMF_1624 PF00175 Oxidoreductase NAD-binding domain BAMF_1624 PF10418 Iron-sulfur cluster binding domain of dihydroorotate dehydrogenase B BAMF_1625 PF01180 Dihydroorotate dehydrogenase BAMF_1626 PF00215 Orotidine 5'-phosphate decarboxylase / HUMPS family BAMF_1627 PF00156 Phosphoribosyl transferase domain BAMF_1628 PF01507 Phosphoadenosine phosphosulfate reductase family BAMF_1629 PF01384 Phosphate transporter family BAMF_1630 PF14306 PUA-like domain BAMF_1630 PF01747 ATP-sulfurylase BAMF_1632 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases BAMF_1633 PF01903 CbiX BAMF_1635 PF09154 Domain of unknown function (DUF1939) BAMF_1635 PF00128 Alpha amylase, catalytic domain BAMF_1637 PF00689 Cation transporting ATPase, C-terminus BAMF_1637 PF00690 Cation transporter/ATPase, N-terminus BAMF_1638 PF03755 YicC-like family, N-terminal region BAMF_1638 PF08340 Domain of unknown function (DUF1732) BAMF_1639 PF04025 Domain of unknown function (DUF370) BAMF_1640 PF00625 Guanylate kinase BAMF_1641 PF01192 RNA polymerase Rpb6 BAMF_1642 PF02441 Flavoprotein BAMF_1642 PF04127 DNA / pantothenate metabolism flavoprotein BAMF_1643 PF04851 Type III restriction enzyme, res subunit BAMF_1643 PF17764 3′ DNA-binding domain (3′BD) BAMF_1643 PF00271 Helicase conserved C-terminal domain BAMF_1643 PF18319 PriA DNA helicase Cys-rich region (CRR) domain BAMF_1643 PF18074 Primosomal protein N C-terminal domain BAMF_1644 PF01327 Polypeptide deformylase BAMF_1645 PF02911 Formyl transferase, C-terminal domain BAMF_1645 PF00551 Formyl transferase BAMF_1646 PF01029 NusB family BAMF_1646 PF01189 16S rRNA methyltransferase RsmB/F BAMF_1647 PF04055 Radical SAM superfamily BAMF_1649 PF00069 Protein kinase domain BAMF_1649 PF03793 PASTA domain BAMF_1650 PF16745 RsgA N-terminal domain BAMF_1650 PF03193 RsgA GTPase BAMF_1651 PF00834 Ribulose-phosphate 3 epimerase family BAMF_1652 PF04265 Thiamin pyrophosphokinase, vitamin B1 binding domain BAMF_1652 PF04263 Thiamin pyrophosphokinase, catalytic domain BAMF_1653 PF08183 Stage V sporulation protein family BAMF_1654 PF00830 Ribosomal L28 family BAMF_1655 PF03780 Asp23 family, cell envelope-related function BAMF_1656 PF13684 Dihydroxyacetone kinase family BAMF_1656 PF02734 DAK2 domain BAMF_1657 PF01842 ACT domain BAMF_1657 PF03315 Serine dehydratase beta chain BAMF_1658 PF03313 Serine dehydratase alpha chain BAMF_1659 PF17191 RecG wedge domain BAMF_1659 PF00270 DEAD/DEAH box helicase BAMF_1659 PF00271 Helicase conserved C-terminal domain BAMF_1660 PF03061 Thioesterase superfamily BAMF_1661 PF02504 Fatty acid synthesis protein BAMF_1662 PF00698 Acyl transferase domain BAMF_1664 PF00550 Phosphopantetheine attachment site BAMF_1665 PF00035 Double-stranded RNA binding motif BAMF_1665 PF14622 Ribonuclease-III-like BAMF_1666 PF02463 RecF/RecN/SMC N terminal domain BAMF_1666 PF06470 SMC proteins Flexible Hinge Domain BAMF_1667 PF00448 SRP54-type protein, GTPase domain BAMF_1667 PF02881 SRP54-type protein, helical bundle domain BAMF_1668 PF04297 Putative helix-turn-helix protein, YlxM / p13 like BAMF_1669 PF00448 SRP54-type protein, GTPase domain BAMF_1669 PF02881 SRP54-type protein, helical bundle domain BAMF_1669 PF02978 Signal peptide binding domain BAMF_1670 PF00886 Ribosomal protein S16 BAMF_1672 PF11068 YlqD protein BAMF_1673 PF01782 RimM N-terminal domain BAMF_1673 PF05239 PRC-barrel domain BAMF_1674 PF01746 tRNA (Guanine-1)-methyltransferase BAMF_1675 PF01245 Ribosomal protein L19 BAMF_1676 PF01926 50S ribosome-binding GTPase BAMF_1677 PF01351 Ribonuclease HII BAMF_1679 PF01312 FlhB HrpN YscU SpaS Family BAMF_1680 PF00549 CoA-ligase BAMF_1680 PF08442 ATP-grasp domain BAMF_1681 PF00549 CoA-ligase BAMF_1681 PF02629 CoA binding domain BAMF_1682 PF02481 DNA recombination-mediator protein A BAMF_1683 PF01751 Toprim domain BAMF_1683 PF01396 Topoisomerase DNA binding C4 zinc finger BAMF_1683 PF01131 DNA topoisomerase BAMF_1684 PF01134 Glucose inhibited division protein A BAMF_1685 PF02899 Phage integrase, N-terminal SAM-like domain BAMF_1685 PF00589 Phage integrase family BAMF_1686 PF00227 Proteasome subunit BAMF_1687 PF00004 ATPase family associated with various cellular activities (AAA) BAMF_1687 PF10431 C-terminal, D2-small domain, of ClpB protein BAMF_1687 PF07724 AAA domain (Cdc48 subfamily) BAMF_1688 PF06018 CodY GAF-like domain BAMF_1688 PF08222 CodY helix-turn-helix domain BAMF_1689 PF00460 Flagella basal body rod protein BAMF_1690 PF00460 Flagella basal body rod protein BAMF_1690 PF06429 Flagellar basal body rod FlgEFG protein C-terminal BAMF_1691 PF02049 Flagellar hook-basal body complex protein FliE BAMF_1692 PF08345 Flagellar M-ring protein C-terminal BAMF_1692 PF01514 Secretory protein of YscJ/FliF family BAMF_1693 PF14842 FliG N-terminal domain BAMF_1693 PF14841 FliG middle domain BAMF_1693 PF01706 FliG C-terminal domain BAMF_1694 PF02108 Flagellar assembly protein FliH BAMF_1695 PF18269 T3SS EscN ATPase C-terminal domain BAMF_1695 PF02874 ATP synthase alpha/beta family, beta-barrel domain BAMF_1695 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain BAMF_1696 PF02050 Flagellar FliJ protein BAMF_1697 PF03448 MgtE intracellular N domain BAMF_1698 PF02120 Flagellar hook-length control protein FliK BAMF_1699 PF03963 Flagellar hook capping protein - N-terminal region BAMF_1700 PF06429 Flagellar basal body rod FlgEFG protein C-terminal BAMF_1700 PF00460 Flagella basal body rod protein BAMF_1701 PF06289 Flagellar and Swarming motility proteins BAMF_1702 PF03748 Flagellar basal body-associated protein FliL BAMF_1703 PF02154 Flagellar motor switch protein FliM BAMF_1703 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term BAMF_1704 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term BAMF_1704 PF04509 CheC-like family BAMF_1705 PF00072 Response regulator receiver domain BAMF_1706 PF04347 Flagellar biosynthesis protein, FliO BAMF_1707 PF00813 FliP family BAMF_1708 PF01313 Bacterial export proteins, family 3 BAMF_1709 PF01311 Bacterial export proteins, family 1 BAMF_1710 PF01312 FlhB HrpN YscU SpaS Family BAMF_1711 PF00771 FHIPEP family BAMF_1712 PF00448 SRP54-type protein, GTPase domain BAMF_1713 PF10609 NUBPL iron-transfer P-loop NTPase BAMF_1714 PF00072 Response regulator receiver domain BAMF_1714 PF01339 CheB methylesterase BAMF_1715 PF01627 Hpt domain BAMF_1715 PF01584 CheW-like domain BAMF_1715 PF02895 Signal transducing histidine kinase, homodimeric domain BAMF_1715 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BAMF_1715 PF07194 P2 response regulator binding domain BAMF_1716 PF01584 CheW-like domain BAMF_1717 PF04509 CheC-like family BAMF_1718 PF03975 CheD chemotactic sensory transduction BAMF_1719 PF04545 Sigma-70, region 4 BAMF_1719 PF04539 Sigma-70 region 3 BAMF_1719 PF04542 Sigma-70 region 2 BAMF_1721 PF00318 Ribosomal protein S2 BAMF_1722 PF00889 Elongation factor TS BAMF_1723 PF00696 Amino acid kinase family BAMF_1724 PF01765 Ribosome recycling factor BAMF_1725 PF01255 Putative undecaprenyl diphosphate synthase BAMF_1727 PF13288 DXP reductoisomerase C-terminal domain BAMF_1727 PF08436 1-deoxy-D-xylulose 5-phosphate reductoisomerase C-terminal domain BAMF_1727 PF02670 1-deoxy-D-xylulose 5-phosphate reductoisomerase BAMF_1728 PF02163 Peptidase family M50 BAMF_1728 PF17820 PDZ domain BAMF_1729 PF04073 Aminoacyl-tRNA editing domain BAMF_1729 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) BAMF_1729 PF03129 Anticodon binding domain BAMF_1730 PF14480 DNA polymerase III polC-type N-terminus I BAMF_1730 PF02811 PHP domain BAMF_1730 PF07733 Bacterial DNA polymerase III alpha NTPase domain BAMF_1730 PF00929 Exonuclease BAMF_1730 PF17657 Bacterial DNA polymerase III alpha subunit finger domain BAMF_1730 PF14579 Helix-hairpin-helix motif BAMF_1730 PF11490 DNA polymerase III polC-type N-terminus II BAMF_1731 PF02576 RimP N-terminal domain BAMF_1731 PF17384 RimP C-terminal SH3 domain BAMF_1732 PF08529 NusA N-terminal domain BAMF_1732 PF00575 S1 RNA binding domain BAMF_1732 PF13184 NusA-like KH domain BAMF_1733 PF04296 Protein of unknown function (DUF448) BAMF_1734 PF01248 Ribosomal protein L7Ae/L30e/S12e/Gadd45 family BAMF_1735 PF04760 Translation initiation factor IF-2, N-terminal region BAMF_1735 PF11987 Translation-initiation factor 2 BAMF_1735 PF00009 Elongation factor Tu GTP binding domain BAMF_1736 PF04456 Protein of unknown function (DUF503) BAMF_1737 PF02033 Ribosome-binding factor A BAMF_1738 PF01509 TruB family pseudouridylate synthase (N terminal domain) BAMF_1738 PF16198 tRNA pseudouridylate synthase B C-terminal domain BAMF_1739 PF01687 Riboflavin kinase BAMF_1739 PF06574 FAD synthetase BAMF_1740 PF00312 Ribosomal protein S15 BAMF_1741 PF00013 KH domain BAMF_1741 PF03726 Polyribonucleotide nucleotidyltransferase, RNA binding domain BAMF_1741 PF01138 3' exoribonuclease family, domain 1 BAMF_1741 PF03725 3' exoribonuclease family, domain 2 BAMF_1741 PF00575 S1 RNA binding domain BAMF_1742 PF01522 Polysaccharide deacetylase BAMF_1743 PF00675 Insulinase (Peptidase family M16) BAMF_1743 PF05193 Peptidase M16 inactive domain BAMF_1744 PF05239 PRC-barrel domain BAMF_1745 PF16924 Dipicolinate synthase subunit A N-terminal domain BAMF_1745 PF01262 Alanine dehydrogenase/PNT, C-terminal domain BAMF_1746 PF02441 Flavoprotein BAMF_1747 PF01118 Semialdehyde dehydrogenase, NAD binding domain BAMF_1747 PF02774 Semialdehyde dehydrogenase, dimerisation domain BAMF_1748 PF13840 ACT domain BAMF_1748 PF00696 Amino acid kinase family BAMF_1749 PF00701 Dihydrodipicolinate synthetase family BAMF_1750 PF17770 Ribonuclease J C-terminal domain BAMF_1750 PF00753 Metallo-beta-lactamase superfamily BAMF_1750 PF07521 Zn-dependent metallo-hydrolase RNA specificity domain BAMF_1751 PF00574 Clp protease BAMF_1752 PF14035 YlzJ-like protein BAMF_1753 PF01580 FtsK/SpoIIIE family BAMF_1753 PF09397 Ftsk gamma domain BAMF_1753 PF17854 FtsK alpha domain BAMF_1754 PF07702 UTRA domain BAMF_1754 PF00392 Bacterial regulatory proteins, gntR family BAMF_1755 PF07690 Major Facilitator Superfamily BAMF_1756 PF01047 MarR family BAMF_1757 PF03176 MMPL family BAMF_1758 PF05193 Peptidase M16 inactive domain BAMF_1759 PF05193 Peptidase M16 inactive domain BAMF_1759 PF00675 Insulinase (Peptidase family M16) BAMF_1761 PF11588 Protein of unknown function (DUF3243) BAMF_1762 PF11868 Protein of unknown function (DUF3388) BAMF_1763 PF13464 Domain of unknown function (DUF4115) BAMF_1764 PF01066 CDP-alcohol phosphatidyltransferase BAMF_1765 PF00994 Probable molybdopterin binding domain BAMF_1765 PF18146 Damage-inducible protein CinA KH domain BAMF_1765 PF02464 Competence-damaged protein BAMF_1766 PF00154 recA bacterial DNA recombination protein BAMF_1767 PF00144 Beta-lactamase BAMF_1768 PF12072 Domain of unknown function (DUF3552) BAMF_1768 PF00013 KH domain BAMF_1768 PF01966 HD domain BAMF_1769 PF13277 YmdB-like protein BAMF_1770 PF04232 Stage V sporulation protein S (SpoVS) BAMF_1771 PF08240 Alcohol dehydrogenase GroES-like domain BAMF_1771 PF00107 Zinc-binding dehydrogenase BAMF_1772 PF00155 Aminotransferase class I and II BAMF_1773 PF00919 Uncharacterized protein family UPF0004 BAMF_1773 PF01938 TRAM domain BAMF_1773 PF04055 Radical SAM superfamily BAMF_1774 PF06133 Control of competence regulator ComK, YlbF/YmcA BAMF_1775 PF10628 Outer spore coat protein E (CotE) BAMF_1776 PF05188 MutS domain II BAMF_1776 PF05192 MutS domain III BAMF_1776 PF01624 MutS domain I BAMF_1776 PF05190 MutS family domain IV BAMF_1776 PF00488 MutS domain V BAMF_1777 PF08676 MutL C terminal dimerisation domain BAMF_1777 PF01119 DNA mismatch repair protein, C-terminal domain BAMF_1778 PF00753 Metallo-beta-lactamase superfamily BAMF_1779 PF00698 Acyl transferase domain BAMF_1780 PF00698 Acyl transferase domain BAMF_1781 PF00698 Acyl transferase domain BAMF_1782 PF00550 Phosphopantetheine attachment site BAMF_1783 PF01154 Hydroxymethylglutaryl-coenzyme A synthase N terminal BAMF_1783 PF08540 Hydroxymethylglutaryl-coenzyme A synthase C terminal BAMF_1784 PF00378 Enoyl-CoA hydratase/isomerase BAMF_1785 PF00378 Enoyl-CoA hydratase/isomerase BAMF_1786 PF00668 Condensation domain BAMF_1786 PF08659 KR domain BAMF_1786 PF02801 Beta-ketoacyl synthase, C-terminal domain BAMF_1786 PF00109 Beta-ketoacyl synthase, N-terminal domain BAMF_1786 PF16197 Ketoacyl-synthetase C-terminal extension BAMF_1786 PF00501 AMP-binding enzyme BAMF_1786 PF13193 AMP-binding enzyme C-terminal domain BAMF_1786 PF14765 Polyketide synthase dehydratase BAMF_1786 PF00550 Phosphopantetheine attachment site BAMF_1787 PF14765 Polyketide synthase dehydratase BAMF_1787 PF16197 Ketoacyl-synthetase C-terminal extension BAMF_1787 PF00550 Phosphopantetheine attachment site BAMF_1787 PF00109 Beta-ketoacyl synthase, N-terminal domain BAMF_1787 PF02801 Beta-ketoacyl synthase, C-terminal domain BAMF_1787 PF08659 KR domain BAMF_1788 PF00109 Beta-ketoacyl synthase, N-terminal domain BAMF_1788 PF00550 Phosphopantetheine attachment site BAMF_1788 PF14765 Polyketide synthase dehydratase BAMF_1788 PF16197 Ketoacyl-synthetase C-terminal extension BAMF_1788 PF08242 Methyltransferase domain BAMF_1788 PF00109 Beta-ketoacyl synthase, N-terminal domain BAMF_1788 PF16197 Ketoacyl-synthetase C-terminal extension BAMF_1788 PF08659 KR domain BAMF_1788 PF02801 Beta-ketoacyl synthase, C-terminal domain BAMF_1788 PF08659 KR domain BAMF_1788 PF08242 Methyltransferase domain BAMF_1788 PF00550 Phosphopantetheine attachment site BAMF_1788 PF14765 Polyketide synthase dehydratase BAMF_1788 PF02801 Beta-ketoacyl synthase, C-terminal domain BAMF_1789 PF00501 AMP-binding enzyme BAMF_1789 PF16197 Ketoacyl-synthetase C-terminal extension BAMF_1789 PF00109 Beta-ketoacyl synthase, N-terminal domain BAMF_1789 PF02801 Beta-ketoacyl synthase, C-terminal domain BAMF_1789 PF08659 KR domain BAMF_1789 PF00550 Phosphopantetheine attachment site BAMF_1789 PF14765 Polyketide synthase dehydratase BAMF_1789 PF13193 AMP-binding enzyme C-terminal domain BAMF_1789 PF00668 Condensation domain BAMF_1790 PF16197 Ketoacyl-synthetase C-terminal extension BAMF_1790 PF00975 Thioesterase domain BAMF_1790 PF00109 Beta-ketoacyl synthase, N-terminal domain BAMF_1790 PF02801 Beta-ketoacyl synthase, C-terminal domain BAMF_1790 PF14765 Polyketide synthase dehydratase BAMF_1790 PF00550 Phosphopantetheine attachment site BAMF_1790 PF08242 Methyltransferase domain BAMF_1791 PF00067 Cytochrome P450 BAMF_1792 PF14040 Deoxyribonuclease NucA/NucB BAMF_1793 PF06912 Protein of unknown function (DUF1275) BAMF_1795 PF00082 Subtilase family BAMF_1796 PF05908 Poly-gamma-glutamate hydrolase BAMF_1797 PF02566 OsmC-like protein BAMF_1798 PF00893 Small Multidrug Resistance protein BAMF_1799 PF00893 Small Multidrug Resistance protein BAMF_1801 PF12788 YmaF family BAMF_1803 PF17209 Hfq protein BAMF_1804 PF14157 YmzC-like protein BAMF_1806 PF07972 NrdI Flavodoxin like BAMF_1807 PF00317 Ribonucleotide reductase, all-alpha domain BAMF_1807 PF02867 Ribonucleotide reductase, barrel domain BAMF_1807 PF08343 Ribonucleotide reductase N-terminal BAMF_1808 PF00268 Ribonucleotide reductase, small chain BAMF_1810 PF05036 Sporulation related domain BAMF_1810 PF01520 N-acetylmuramoyl-L-alanine amidase BAMF_1811 PF00004 ATPase family associated with various cellular activities (AAA) BAMF_1811 PF17866 AAA lid domain BAMF_1812 PF13167 GTP-binding GTPase N-terminal BAMF_1812 PF16360 GTP-binding GTPase Middle Region BAMF_1812 PF01926 50S ribosome-binding GTPase BAMF_1813 PF06838 Methionine gamma-lyase BAMF_1814 PF13411 MerR HTH family regulatory protein BAMF_1815 PF03951 Glutamine synthetase, beta-Grasp domain BAMF_1815 PF00120 Glutamine synthetase, catalytic domain BAMF_1816 PF00589 Phage integrase family BAMF_1816 PF14659 Phage integrase, N-terminal SAM-like domain BAMF_1818 PF00565 Staphylococcal nuclease homologue BAMF_1818 PF05901 Excalibur calcium-binding domain BAMF_1821 PF04740 LXG domain of WXG superfamily BAMF_1821 PF14411 A nuclease of the HNH/ENDO VII superfamily with conserved LHH BAMF_1823 PF09560 Sporulation protein YunB (Spo_YunB) BAMF_1824 PF08863 YolD-like protein BAMF_1825 PF11799 impB/mucB/samB family C-terminal domain BAMF_1825 PF00817 impB/mucB/samB family BAMF_1825 PF11798 IMS family HHH motif BAMF_1827 PF13847 Methyltransferase domain BAMF_1829 PF02782 FGGY family of carbohydrate kinases, C-terminal domain BAMF_1829 PF00370 FGGY family of carbohydrate kinases, N-terminal domain BAMF_1830 PF00457 Glycosyl hydrolases family 11 BAMF_1831 PF00391 PEP-utilising enzyme, mobile domain BAMF_1831 PF01326 Pyruvate phosphate dikinase, PEP/pyruvate binding domain BAMF_1833 PF00107 Zinc-binding dehydrogenase BAMF_1833 PF08240 Alcohol dehydrogenase GroES-like domain BAMF_1834 PF18801 response regulator aspartate phosphatase H, N terminal BAMF_1835 PF01526 Tn3 transposase DDE domain BAMF_1835 PF13700 Domain of unknown function (DUF4158) BAMF_1836 PF00239 Resolvase, N terminal domain BAMF_1836 PF02796 Helix-turn-helix domain of resolvase BAMF_1840 PF03862 SpoVAC/SpoVAEB sporulation membrane protein BAMF_1841 PF07451 Stage V sporulation protein AD (SpoVAD) BAMF_1842 PF03862 SpoVAC/SpoVAEB sporulation membrane protein BAMF_1843 PF04239 Protein of unknown function (DUF421) BAMF_1845 PF13396 Phospholipase_D-nuclease N-terminal BAMF_1845 PF13091 PLD-like domain BAMF_1847 PF05163 DinB family BAMF_1848 PF08240 Alcohol dehydrogenase GroES-like domain BAMF_1848 PF00107 Zinc-binding dehydrogenase BAMF_1851 PF13217 Protein of unknown function (DUF4025) BAMF_1852 PF17094 Uncharacterised protein family (UPF0715) BAMF_1853 PF14268 YoaP-like BAMF_1853 PF00583 Acetyltransferase (GNAT) family BAMF_1856 PF16302 Domain of unknown function (DUF4944) BAMF_1857 PF13021 Domain of unknown function (DUF3885) BAMF_1859 PF03067 Lytic polysaccharide mono-oxygenase, cellulose-degrading BAMF_1859 PF18416 N-acetylglucosamine binding protein domain 2 BAMF_1862 PF11962 Peptidase_G2, IMC autoproteolytic cleavage domain BAMF_1862 PF12708 Pectate lyase superfamily protein BAMF_1863 PF05154 TM2 domain BAMF_1864 PF00692 dUTPase BAMF_1865 PF13783 Domain of unknown function (DUF4177) BAMF_1866 PF05908 Poly-gamma-glutamate hydrolase BAMF_1869 PF10710 Protein of unknown function (DUF2512) BAMF_1871 PF00717 Peptidase S24-like BAMF_1871 PF01726 LexA DNA binding domain BAMF_1872 PF01476 LysM domain BAMF_1873 PF00239 Resolvase, N terminal domain BAMF_1874 PF05979 Bacterial protein of unknown function (DUF896) BAMF_1875 PF00456 Transketolase, thiamine diphosphate binding domain BAMF_1875 PF02780 Transketolase, C-terminal domain BAMF_1875 PF02779 Transketolase, pyrimidine binding domain BAMF_1876 PF10747 Sporulation inhibitor of replication protein SirA BAMF_1877 PF03672 Uncharacterised protein family (UPF0154) BAMF_1878 PF09388 Spo0E like sporulation regulatory protein BAMF_1879 PF02683 Cytochrome C biogenesis protein transmembrane region BAMF_1880 PF00072 Response regulator receiver domain BAMF_1881 PF07301 Protein of unknown function (DUF1453) BAMF_1882 PF11084 Protein of unknown function (DUF2621) BAMF_1884 PF08179 Small acid-soluble spore protein P family BAMF_1886 PF00330 Aconitase family (aconitate hydratase) BAMF_1886 PF00694 Aconitase C-terminal domain BAMF_1887 PF00578 AhpC/TSA family BAMF_1888 PF13040 Fur-regulated basic protein B BAMF_1889 PF08177 Small acid-soluble spore protein N family BAMF_1891 PF03061 Thioesterase superfamily BAMF_1893 PF01521 Iron-sulphur cluster biosynthesis BAMF_1894 PF02660 Glycerol-3-phosphate acyltransferase BAMF_1895 PF13380 CoA binding domain BAMF_1896 PF00986 DNA gyrase B subunit, carboxyl terminus BAMF_1896 PF00204 DNA gyrase B BAMF_1896 PF01751 Toprim domain BAMF_1896 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BAMF_1897 PF00521 DNA gyrase/topoisomerase IV, subunit A BAMF_1897 PF03989 DNA gyrase C-terminal domain, beta-propeller BAMF_1900 PF01235 Sodium:alanine symporter family BAMF_1904 PF13761 Domain of unknown function (DUF4166) BAMF_1905 PF14158 YndJ-like protein BAMF_1907 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BAMF_1907 PF00512 His Kinase A (phospho-acceptor) domain BAMF_1908 PF00072 Response regulator receiver domain BAMF_1908 PF00486 Transcriptional regulatory protein, C terminal BAMF_1909 PF17189 Glycosyl hydrolase family 30 beta sandwich domain BAMF_1909 PF02055 Glycosyl hydrolase family 30 TIM-barrel domain BAMF_1910 PF03422 Carbohydrate binding module (family 6) BAMF_1910 PF04616 Glycosyl hydrolases family 43 BAMF_1911 PF00550 Phosphopantetheine attachment site BAMF_1911 PF00668 Condensation domain BAMF_1911 PF00975 Thioesterase domain BAMF_1911 PF13193 AMP-binding enzyme C-terminal domain BAMF_1911 PF00501 AMP-binding enzyme BAMF_1912 PF13193 AMP-binding enzyme C-terminal domain BAMF_1912 PF00668 Condensation domain BAMF_1912 PF00501 AMP-binding enzyme BAMF_1912 PF00550 Phosphopantetheine attachment site BAMF_1913 PF00109 Beta-ketoacyl synthase, N-terminal domain BAMF_1913 PF13193 AMP-binding enzyme C-terminal domain BAMF_1913 PF00550 Phosphopantetheine attachment site BAMF_1913 PF00501 AMP-binding enzyme BAMF_1913 PF00202 Aminotransferase class-III BAMF_1913 PF02801 Beta-ketoacyl synthase, C-terminal domain BAMF_1913 PF16197 Ketoacyl-synthetase C-terminal extension BAMF_1913 PF00668 Condensation domain BAMF_1914 PF00698 Acyl transferase domain BAMF_1915 PF04295 D-galactarate dehydratase / Altronate hydrolase, C terminus BAMF_1915 PF08666 SAF domain BAMF_1917 PF01144 Coenzyme A transferase BAMF_1918 PF01144 Coenzyme A transferase BAMF_1919 PF00067 Cytochrome P450 BAMF_1920 PF04055 Radical SAM superfamily BAMF_1920 PF06968 Biotin and Thiamin Synthesis associated domain BAMF_1922 PF00155 Aminotransferase class I and II BAMF_1923 PF00202 Aminotransferase class-III BAMF_1924 PF03744 6-carboxyhexanoate--CoA ligase BAMF_1925 PF04138 GtrA-like protein BAMF_1926 PF00483 Nucleotidyl transferase BAMF_1927 PF09335 SNARE associated Golgi protein BAMF_1928 PF01039 Carboxyl transferase domain BAMF_1929 PF00378 Enoyl-CoA hydratase/isomerase BAMF_1930 PF00682 HMGL-like BAMF_1931 PF00364 Biotin-requiring enzyme BAMF_1932 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain BAMF_1932 PF00289 Biotin carboxylase, N-terminal domain BAMF_1932 PF02785 Biotin carboxylase C-terminal domain BAMF_1933 PF00501 AMP-binding enzyme BAMF_1933 PF13193 AMP-binding enzyme C-terminal domain BAMF_1934 PF00501 AMP-binding enzyme BAMF_1934 PF13193 AMP-binding enzyme C-terminal domain BAMF_1935 PF00441 Acyl-CoA dehydrogenase, C-terminal domain BAMF_1935 PF02771 Acyl-CoA dehydrogenase, N-terminal domain BAMF_1935 PF02770 Acyl-CoA dehydrogenase, middle domain BAMF_1936 PF02638 Glycosyl hydrolase-like 10 BAMF_1937 PF07098 Protein of unknown function (DUF1360) BAMF_1938 PF00550 Phosphopantetheine attachment site BAMF_1938 PF00501 AMP-binding enzyme BAMF_1938 PF13193 AMP-binding enzyme C-terminal domain BAMF_1938 PF00668 Condensation domain BAMF_1938 PF00975 Thioesterase domain BAMF_1939 PF13193 AMP-binding enzyme C-terminal domain BAMF_1939 PF00550 Phosphopantetheine attachment site BAMF_1939 PF00668 Condensation domain BAMF_1939 PF00501 AMP-binding enzyme BAMF_1940 PF02113 D-Ala-D-Ala carboxypeptidase 3 (S13) family BAMF_1941 PF01263 Aldose 1-epimerase BAMF_1942 PF01554 MatE BAMF_1943 PF16800 IseA DL-endopeptidase inhibitor BAMF_1944 PF00589 Phage integrase family BAMF_1945 PF12728 Helix-turn-helix domain BAMF_1947 PF07690 Major Facilitator Superfamily BAMF_1949 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain BAMF_1949 PF03129 Anticodon binding domain BAMF_1949 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) BAMF_1949 PF02824 TGS domain BAMF_1950 PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster BAMF_1950 PF07992 Pyridine nucleotide-disulphide oxidoreductase BAMF_1951 PF01493 GXGXG motif BAMF_1951 PF00310 Glutamine amidotransferases class-II BAMF_1951 PF01645 Conserved region in glutamate synthase BAMF_1951 PF04898 Glutamate synthase central domain BAMF_1952 PF03466 LysR substrate binding domain BAMF_1952 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family BAMF_1953 PF01472 PUA domain BAMF_1953 PF00696 Amino acid kinase family BAMF_1954 PF03807 NADP oxidoreductase coenzyme F420-dependent BAMF_1954 PF14748 Pyrroline-5-carboxylate reductase dimerisation BAMF_1955 PF02334 Replication terminator protein BAMF_1956 PF00106 short chain dehydrogenase BAMF_1957 PF06103 Bacterial protein of unknown function (DUF948) BAMF_1959 PF13091 PLD-like domain BAMF_1959 PF13396 Phospholipase_D-nuclease N-terminal BAMF_1961 PF04239 Protein of unknown function (DUF421) BAMF_1962 PF03862 SpoVAC/SpoVAEB sporulation membrane protein BAMF_1963 PF07451 Stage V sporulation protein AD (SpoVAD) BAMF_1964 PF03862 SpoVAC/SpoVAEB sporulation membrane protein BAMF_1967 PF00239 Resolvase, N terminal domain BAMF_1967 PF02796 Helix-turn-helix domain of resolvase BAMF_1968 PF01526 Tn3 transposase DDE domain BAMF_1968 PF13700 Domain of unknown function (DUF4158) BAMF_1969 PF07690 Major Facilitator Superfamily BAMF_1970 PF00370 FGGY family of carbohydrate kinases, N-terminal domain BAMF_1970 PF02782 FGGY family of carbohydrate kinases, C-terminal domain BAMF_1971 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain BAMF_1971 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain BAMF_1972 PF00384 Molybdopterin oxidoreductase BAMF_1972 PF01568 Molydopterin dinucleotide binding domain BAMF_1972 PF04879 Molybdopterin oxidoreductase Fe4S4 domain BAMF_1978 PF01588 Putative tRNA binding domain BAMF_1979 PF12833 Helix-turn-helix domain BAMF_1979 PF07883 Cupin domain BAMF_1980 PF13305 Tetracyclin repressor-like, C-terminal domain BAMF_1980 PF00440 Bacterial regulatory proteins, tetR family BAMF_1981 PF00753 Metallo-beta-lactamase superfamily BAMF_1983 PF01022 Bacterial regulatory protein, arsR family BAMF_1985 PF04238 Protein of unknown function (DUF420) BAMF_1986 PF18846 Bacterial archaeo-eukaryotic release factor family 5 BAMF_1988 PF02016 LD-carboxypeptidase N-terminal domain BAMF_1988 PF17676 LD-carboxypeptidase C-terminal domain BAMF_1990 PF06725 3D domain BAMF_1990 PF01476 LysM domain BAMF_1991 PF00570 HRDC domain BAMF_1991 PF16124 RecQ zinc-binding BAMF_1991 PF09382 RQC domain BAMF_1991 PF00270 DEAD/DEAH box helicase BAMF_1991 PF00271 Helicase conserved C-terminal domain BAMF_1992 PF02525 Flavodoxin-like fold BAMF_1993 PF01258 Prokaryotic dksA/traR C4-type zinc finger BAMF_1996 PF00011 Hsp20/alpha crystallin family BAMF_1999 PF08000 Bacterial PH domain BAMF_2002 PF00171 Aldehyde dehydrogenase family BAMF_2003 PF13249 Squalene-hopene cyclase N-terminal domain BAMF_2003 PF13243 Squalene-hopene cyclase C-terminal domain BAMF_2004 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain BAMF_2004 PF02777 Iron/manganese superoxide dismutases, C-terminal domain BAMF_2005 PF00209 Sodium:neurotransmitter symporter family BAMF_2006 PF01758 Sodium Bile acid symporter family BAMF_2007 PF00753 Metallo-beta-lactamase superfamily BAMF_2008 PF00364 Biotin-requiring enzyme BAMF_2008 PF02817 e3 binding domain BAMF_2008 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) BAMF_2009 PF02779 Transketolase, pyrimidine binding domain BAMF_2009 PF16870 2-oxoglutarate dehydrogenase C-terminal BAMF_2009 PF00676 Dehydrogenase E1 component BAMF_2010 PF00092 von Willebrand factor type A domain BAMF_2011 PF07728 AAA domain (dynein-related subfamily) BAMF_2012 PF13627 Prokaryotic lipoprotein-attachment site BAMF_2012 PF00080 Copper/zinc superoxide dismutase (SODC) BAMF_2013 PF00877 NlpC/P60 family BAMF_2013 PF01476 LysM domain BAMF_2014 PF00201 UDP-glucoronosyl and UDP-glucosyl transferase BAMF_2015 PF02457 DisA bacterial checkpoint controller nucleotide-binding BAMF_2015 PF10372 Bacterial membrane-spanning protein N-terminus BAMF_2016 PF01554 MatE BAMF_2017 PF01740 STAS domain BAMF_2018 PF02585 GlcNAc-PI de-N-acetylase BAMF_2019 PF08830 Protein of unknown function (DUF1806) BAMF_2021 PF00892 EamA-like transporter family BAMF_2024 PF14552 Tautomerase enzyme BAMF_2025 PF01638 HxlR-like helix-turn-helix BAMF_2026 PF00881 Nitroreductase family BAMF_2027 PF01738 Dienelactone hydrolase family BAMF_2028 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily BAMF_2029 PF11755 Protein of unknown function (DUF3311) BAMF_2030 PF00474 Sodium:solute symporter family BAMF_2032 PF00232 Glycosyl hydrolase family 1 BAMF_2033 PF07702 UTRA domain BAMF_2033 PF00392 Bacterial regulatory proteins, gntR family BAMF_2034 PF17820 PDZ domain BAMF_2034 PF03572 Peptidase family S41 BAMF_2034 PF01471 Putative peptidoglycan binding domain BAMF_2035 PF08241 Methyltransferase domain BAMF_2037 PF02557 D-alanyl-D-alanine carboxypeptidase BAMF_2038 PF01048 Phosphorylase superfamily BAMF_2040 PF14191 YodL-like BAMF_2041 PF01569 PAP2 superfamily BAMF_2042 PF14162 YozD-like protein BAMF_2045 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily BAMF_2046 PF06855 YozE SAM-like fold BAMF_2047 PF14122 YokU-like protein, putative antitoxin BAMF_2048 PF12544 Lysine-2,3-aminomutase BAMF_2049 PF00583 Acetyltransferase (GNAT) family BAMF_2050 PF07687 Peptidase dimerisation domain BAMF_2050 PF01546 Peptidase family M20/M25/M40 BAMF_2051 PF01144 Coenzyme A transferase BAMF_2052 PF01144 Coenzyme A transferase BAMF_2053 PF00202 Aminotransferase class-III BAMF_2055 PF06445 GyrI-like small molecule binding domain BAMF_2057 PF00583 Acetyltransferase (GNAT) family BAMF_2058 PF00535 Glycosyl transferase family 2 BAMF_2061 PF12996 DUF based on E. rectale Gene description (DUF3880) BAMF_2062 PF02333 Phytase BAMF_2063 PF08485 Polysaccharide biosynthesis protein C-terminal BAMF_2063 PF02719 Polysaccharide biosynthesis protein BAMF_2066 PF01070 FMN-dependent dehydrogenase BAMF_2069 PF00239 Resolvase, N terminal domain BAMF_2069 PF07508 Recombinase BAMF_2070 PF02719 Polysaccharide biosynthesis protein BAMF_2071 PF01641 SelR domain BAMF_2072 PF01625 Peptide methionine sulfoxide reductase BAMF_2073 PF01047 MarR family BAMF_2074 PF09911 Uncharacterized protein conserved in bacteria (DUF2140) BAMF_2075 PF13472 GDSL-like Lipase/Acylhydrolase family BAMF_2076 PF02630 SCO1/SenC BAMF_2077 PF10751 Protein of unknown function (DUF2535) BAMF_2078 PF00585 C-terminal regulatory domain of Threonine dehydratase BAMF_2078 PF00291 Pyridoxal-phosphate dependent enzyme BAMF_2079 PF00158 Sigma-54 interaction domain BAMF_2079 PF08461 Ribonuclease R winged-helix domain BAMF_2080 PF03006 Haemolysin-III related BAMF_2082 PF00186 Dihydrofolate reductase BAMF_2083 PF00303 Thymidylate synthase BAMF_2084 PF14005 YpjP-like protein BAMF_2085 PF04445 Putative SAM-dependent methyltransferase BAMF_2086 PF06491 Disulphide isomerase BAMF_2087 PF00920 Dehydratase family BAMF_2088 PF13769 Virulence factor BAMF_2088 PF08712 Scaffold protein Nfu/NifU N terminal BAMF_2089 PF01966 HD domain BAMF_2090 PF00255 Glutathione peroxidase BAMF_2091 PF04204 Homoserine O-succinyltransferase BAMF_2092 PF00534 Glycosyl transferases group 1 BAMF_2092 PF06925 Monogalactosyldiacylglycerol (MGDG) synthase BAMF_2093 PF00313 'Cold-shock' DNA-binding domain BAMF_2095 PF10819 Protein of unknown function (DUF2564) BAMF_2096 PF10782 Zinc-finger BAMF_2097 PF13456 Reverse transcriptase-like BAMF_2098 PF02592 Putative vitamin uptake transporter BAMF_2099 PF13456 Reverse transcriptase-like BAMF_2101 PF01367 5'-3' exonuclease, C-terminal SAM fold BAMF_2101 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain BAMF_2103 PF10752 Protein of unknown function (DUF2533) BAMF_2104 PF00350 Dynamin family BAMF_2105 PF04140 Isoprenylcysteine carboxyl methyltransferase (ICMT) family BAMF_2106 PF02797 Chalcone and stilbene synthases, C-terminal domain BAMF_2106 PF00195 Chalcone and stilbene synthases, N-terminal domain BAMF_2110 PF00860 Permease family BAMF_2111 PF00156 Phosphoribosyl transferase domain BAMF_2112 PF02074 Carboxypeptidase Taq (M32) metallopeptidase BAMF_2113 PF13307 Helicase C-terminal domain BAMF_2115 PF14139 YpzG-like protein BAMF_2117 PF01170 Putative RNA methylase family UPF0020 BAMF_2117 PF02926 THUMP domain BAMF_2118 PF05103 DivIVA protein BAMF_2119 PF06908 YspA SLOG family BAMF_2120 PF11122 Inner spore coat protein D BAMF_2121 PF13482 RNase_H superfamily BAMF_2122 PF00271 Helicase conserved C-terminal domain BAMF_2122 PF09369 Domain of unknown function (DUF1998) BAMF_2122 PF00270 DEAD/DEAH box helicase BAMF_2123 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 BAMF_2125 PF14179 YppG-like protein BAMF_2126 PF14178 YppF-like protein BAMF_2127 PF08807 Bacterial domain of unknown function (DUF1798) BAMF_2130 PF10720 Protein of unknown function (DUF2515) BAMF_2131 PF03838 Recombination protein U BAMF_2132 PF00912 Transglycosylase BAMF_2132 PF00905 Penicillin binding protein transpeptidase domain BAMF_2134 PF00633 Helix-hairpin-helix motif BAMF_2134 PF00730 HhH-GPD superfamily base excision DNA repair protein BAMF_2134 PF10576 Iron-sulfur binding domain of endonuclease III BAMF_2135 PF07261 Replication initiation and membrane attachment BAMF_2136 PF01336 OB-fold nucleic acid binding domain BAMF_2136 PF00152 tRNA synthetases class II (D, K and N) BAMF_2137 PF00155 Aminotransferase class I and II BAMF_2138 PF17881 Domain of unknown function (DUF5590) BAMF_2138 PF03413 Peptidase propeptide and YPEB domain BAMF_2139 PF14084 Protein of unknown function (DUF4264) BAMF_2140 PF13307 Helicase C-terminal domain BAMF_2140 PF04851 Type III restriction enzyme, res subunit BAMF_2140 PF00929 Exonuclease BAMF_2141 PF02261 Aspartate decarboxylase BAMF_2142 PF02569 Pantoate-beta-alanine ligase BAMF_2143 PF02548 Ketopantoate hydroxymethyltransferase BAMF_2144 PF08279 HTH domain BAMF_2144 PF02237 Biotin protein ligase C terminal domain BAMF_2144 PF03099 Biotin/lipoate A/B protein ligase family BAMF_2145 PF01743 Poly A polymerase head domain BAMF_2145 PF12627 Probable RNA and SrmB- binding site of polymerase A BAMF_2145 PF13735 tRNA nucleotidyltransferase domain 2 putative BAMF_2146 PF00534 Glycosyl transferases group 1 BAMF_2146 PF13439 Glycosyltransferase Family 4 BAMF_2147 PF02585 GlcNAc-PI de-N-acetylase BAMF_2148 PF02142 MGS-like domain BAMF_2149 PF05173 Dihydrodipicolinate reductase, C-terminus BAMF_2149 PF01113 Dihydrodipicolinate reductase, N-terminus BAMF_2150 PF03819 MazG nucleotide pyrophosphohydrolase domain BAMF_2151 PF10035 Uncharacterized protein conserved in bacteria (DUF2179) BAMF_2151 PF02588 Uncharacterised 5xTM membrane BCR, YitT family COG1284 BAMF_2152 PF00190 Cupin BAMF_2153 PF09577 Sporulation protein YpjB (SpoYpjB) BAMF_2154 PF07187 Protein of unknown function (DUF1405) BAMF_2155 PF00032 Cytochrome b(C-terminal)/b6/petD BAMF_2155 PF13442 Cytochrome C oxidase, cbb3-type, subunit III BAMF_2156 PF00033 Cytochrome b/b6/petB BAMF_2157 PF00355 Rieske [2Fe-2S] domain BAMF_2158 PF10673 Protein of unknown function (DUF2487) BAMF_2159 PF08864 UPF0302 domain BAMF_2159 PF08858 IDEAL domain BAMF_2161 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) BAMF_2162 PF01842 ACT domain BAMF_2162 PF02153 Prephenate dehydrogenase BAMF_2163 PF00155 Aminotransferase class I and II BAMF_2164 PF00290 Tryptophan synthase alpha chain BAMF_2165 PF00291 Pyridoxal-phosphate dependent enzyme BAMF_2166 PF00697 N-(5'phosphoribosyl)anthranilate (PRA) isomerase BAMF_2167 PF00218 Indole-3-glycerol phosphate synthase BAMF_2168 PF00591 Glycosyl transferase family, a/b domain BAMF_2168 PF02885 Glycosyl transferase family, helical bundle domain BAMF_2169 PF00425 chorismate binding enzyme BAMF_2169 PF04715 Anthranilate synthase component I, N terminal region BAMF_2170 PF07736 Chorismate mutase type I BAMF_2171 PF01761 3-dehydroquinate synthase BAMF_2172 PF01264 Chorismate synthase BAMF_2173 PF01739 CheR methyltransferase, SAM binding domain BAMF_2173 PF03705 CheR methyltransferase, all-alpha domain BAMF_2174 PF00334 Nucleoside diphosphate kinase BAMF_2175 PF00348 Polyprenyl synthetase BAMF_2176 PF01209 ubiE/COQ5 methyltransferase family BAMF_2177 PF07307 Heptaprenyl diphosphate synthase (HEPPP synthase) subunit 1 BAMF_2178 PF02081 Tryptophan RNA-binding attenuator protein BAMF_2179 PF01227 GTP cyclohydrolase I BAMF_2180 PF00216 Bacterial DNA-binding protein BAMF_2181 PF09547 Stage IV sporulation protein A (spore_IV_A) BAMF_2183 PF10966 Protein of unknown function (DUF2768) BAMF_2184 PF01210 NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus BAMF_2184 PF07479 NAD-dependent glycerol-3-phosphate dehydrogenase C-terminus BAMF_2185 PF01926 50S ribosome-binding GTPase BAMF_2185 PF14714 KH-domain-like of EngA bacterial GTPase enzymes, C-terminal BAMF_2187 PF14140 YpzI-like protein BAMF_2188 PF01070 FMN-dependent dehydrogenase BAMF_2189 PF00575 S1 RNA binding domain BAMF_2190 PF02224 Cytidylate kinase BAMF_2191 PF17313 Family of unknown function (DUF5359) BAMF_2192 PF07238 PilZ domain BAMF_2192 PF12945 Flagellar protein YcgR BAMF_2193 PF14620 YpeB sporulation BAMF_2193 PF03413 Peptidase propeptide and YPEB domain BAMF_2194 PF07486 Cell Wall Hydrolase BAMF_2194 PF01471 Putative peptidoglycan binding domain BAMF_2195 PF13367 PrsW family intramembrane metalloprotease BAMF_2197 PF02812 Glu/Leu/Phe/Val dehydrogenase, dimerisation domain BAMF_2197 PF00208 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase BAMF_2198 PF05389 Negative regulator of genetic competence (MecA) BAMF_2199 PF00149 Calcineurin-like phosphoesterase BAMF_2200 PF10864 Protein of unknown function (DUF2663) BAMF_2201 PF01476 LysM domain BAMF_2202 PF02517 CPBP intramembrane metalloprotease BAMF_2203 PF00271 Helicase conserved C-terminal domain BAMF_2203 PF00270 DEAD/DEAH box helicase BAMF_2204 PF14493 Helix-turn-helix domain BAMF_2206 PF12822 ECF transporter, substrate-specific component BAMF_2207 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain BAMF_2207 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain BAMF_2207 PF01842 ACT domain BAMF_2209 PF08281 Sigma-70, region 4 BAMF_2209 PF04542 Sigma-70 region 2 BAMF_2210 PF00672 HAMP domain BAMF_2210 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BAMF_2210 PF18698 Histidine kinase sensor domain BAMF_2210 PF00512 His Kinase A (phospho-acceptor) domain BAMF_2210 PF00989 PAS fold BAMF_2211 PF00486 Transcriptional regulatory protein, C terminal BAMF_2211 PF00072 Response regulator receiver domain BAMF_2212 PF01578 Cytochrome C assembly protein BAMF_2213 PF05140 ResB-like family BAMF_2214 PF00578 AhpC/TSA family BAMF_2215 PF01479 S4 domain BAMF_2215 PF00849 RNA pseudouridylate synthase BAMF_2216 PF07670 Nucleoside recognition BAMF_2217 PF07670 Nucleoside recognition BAMF_2218 PF07943 Penicillin-binding protein 5, C-terminal domain BAMF_2218 PF00768 D-alanyl-D-alanine carboxypeptidase BAMF_2219 PF13047 Protein of unknown function (DUF3907) BAMF_2220 PF04079 Segregation and condensation complex subunit ScpB BAMF_2221 PF02616 Segregation and condensation protein ScpA BAMF_2222 PF03745 Domain of unknown function (DUF309) BAMF_2223 PF00583 Acetyltransferase (GNAT) family BAMF_2224 PF00885 6,7-dimethyl-8-ribityllumazine synthase BAMF_2225 PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase BAMF_2225 PF00925 GTP cyclohydrolase II BAMF_2226 PF00677 Lumazine binding domain BAMF_2227 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region BAMF_2227 PF01872 RibD C-terminal domain BAMF_2229 PF10502 Signal peptidase, peptidase S26 BAMF_2231 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD BAMF_2232 PF06207 Protein of unknown function (DUF1002) BAMF_2233 PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain BAMF_2233 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain BAMF_2234 PF03323 Bacillus/Clostridium GerA spore germination protein BAMF_2235 PF14097 Stage V sporulation protein AE1 BAMF_2236 PF03862 SpoVAC/SpoVAEB sporulation membrane protein BAMF_2237 PF07451 Stage V sporulation protein AD (SpoVAD) BAMF_2238 PF03862 SpoVAC/SpoVAEB sporulation membrane protein BAMF_2239 PF12164 Stage V sporulation protein AA BAMF_2240 PF04539 Sigma-70 region 3 BAMF_2240 PF04542 Sigma-70 region 2 BAMF_2240 PF04545 Sigma-70, region 4 BAMF_2241 PF13581 Histidine kinase-like ATPase domain BAMF_2242 PF01740 STAS domain BAMF_2243 PF07943 Penicillin-binding protein 5, C-terminal domain BAMF_2243 PF00768 D-alanyl-D-alanine carboxypeptidase BAMF_2244 PF01048 Phosphorylase superfamily BAMF_2245 PF01676 Metalloenzyme superfamily BAMF_2246 PF02899 Phage integrase, N-terminal SAM-like domain BAMF_2246 PF00589 Phage integrase family BAMF_2247 PF14004 Protein of unknown function (DUF4227) BAMF_2248 PF01475 Ferric uptake regulator family BAMF_2249 PF01944 Stage II sporulation protein M BAMF_2252 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain BAMF_2252 PF00390 Malic enzyme, N-terminal domain BAMF_2252 PF03949 Malic enzyme, NAD binding domain BAMF_2253 PF03553 Na+/H+ antiporter family BAMF_2254 PF10415 Fumarase C C-terminus BAMF_2254 PF00206 Lyase BAMF_2255 PF17763 Glutaminase/Asparaginase C-terminal domain BAMF_2255 PF00710 Asparaginase, N-terminal BAMF_2256 PF01381 Helix-turn-helix BAMF_2258 PF00293 NUDIX domain BAMF_2259 PF13072 Mother cell inhibitor of FtsZ BAMF_2260 PF00248 Aldo/keto reductase family BAMF_2262 PF12146 Serine aminopeptidase, S33 BAMF_2263 PF10827 Protein of unknown function (DUF2552) BAMF_2264 PF01521 Iron-sulphur cluster biosynthesis BAMF_2265 PF04229 GrpB protein BAMF_2265 PF13673 Acetyltransferase (GNAT) domain BAMF_2267 PF00583 Acetyltransferase (GNAT) family BAMF_2268 PF00817 impB/mucB/samB family BAMF_2268 PF11799 impB/mucB/samB family C-terminal domain BAMF_2269 PF08863 YolD-like protein BAMF_2270 PF14164 YqzH-like protein BAMF_2271 PF01594 AI-2E family transporter BAMF_2273 PF00485 Phosphoribulokinase / Uridine kinase family BAMF_2274 PF00291 Pyridoxal-phosphate dependent enzyme BAMF_2275 PF00106 short chain dehydrogenase BAMF_2276 PF00753 Metallo-beta-lactamase superfamily BAMF_2277 PF03807 NADP oxidoreductase coenzyme F420-dependent BAMF_2277 PF14748 Pyrroline-5-carboxylate reductase dimerisation BAMF_2278 PF03466 LysR substrate binding domain BAMF_2278 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family BAMF_2280 PF00724 NADH:flavin oxidoreductase / NADH oxidase family BAMF_2281 PF00724 NADH:flavin oxidoreductase / NADH oxidase family BAMF_2282 PF12146 Serine aminopeptidase, S33 BAMF_2283 PF00471 Ribosomal protein L33 BAMF_2284 PF12706 Beta-lactamase superfamily domain BAMF_2285 PF02781 Glucose-6-phosphate dehydrogenase, C-terminal domain BAMF_2285 PF00479 Glucose-6-phosphate dehydrogenase, NAD binding domain BAMF_2286 PF00393 6-phosphogluconate dehydrogenase, C-terminal domain BAMF_2286 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase BAMF_2287 PF11798 IMS family HHH motif BAMF_2287 PF00817 impB/mucB/samB family BAMF_2287 PF11799 impB/mucB/samB family C-terminal domain BAMF_2289 PF02096 60Kd inner membrane protein BAMF_2290 PF07687 Peptidase dimerisation domain BAMF_2290 PF01546 Peptidase family M20/M25/M40 BAMF_2291 PF01039 Carboxyl transferase domain BAMF_2293 PF03734 L,D-transpeptidase catalytic domain BAMF_2294 PF11728 Putative aromatic acid exporter C-terminal domain BAMF_2294 PF06081 Aromatic acid exporter family member 1 BAMF_2295 PF00005 ABC transporter BAMF_2296 PF00528 Binding-protein-dependent transport system inner membrane component BAMF_2297 PF00497 Bacterial extracellular solute-binding proteins, family 3 BAMF_2298 PF06491 Disulphide isomerase BAMF_2299 PF00781 Diacylglycerol kinase catalytic domain BAMF_2300 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) BAMF_2300 PF02817 e3 binding domain BAMF_2300 PF00364 Biotin-requiring enzyme BAMF_2301 PF02779 Transketolase, pyrimidine binding domain BAMF_2301 PF02780 Transketolase, C-terminal domain BAMF_2302 PF00676 Dehydrogenase E1 component BAMF_2303 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain BAMF_2303 PF07992 Pyridine nucleotide-disulphide oxidoreductase BAMF_2304 PF00871 Acetokinase family BAMF_2305 PF00208 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase BAMF_2305 PF02812 Glu/Leu/Phe/Val dehydrogenase, dimerisation domain BAMF_2306 PF01515 Phosphate acetyl/butaryl transferase BAMF_2307 PF00158 Sigma-54 interaction domain BAMF_2307 PF00989 PAS fold BAMF_2307 PF02954 Bacterial regulatory protein, Fis family BAMF_2308 PF11118 Protein of unknown function (DUF2627) BAMF_2310 PF03972 MmgE/PrpD family BAMF_2311 PF00285 Citrate synthase, C-terminal domain BAMF_2312 PF00441 Acyl-CoA dehydrogenase, C-terminal domain BAMF_2312 PF02770 Acyl-CoA dehydrogenase, middle domain BAMF_2312 PF02771 Acyl-CoA dehydrogenase, N-terminal domain BAMF_2313 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain BAMF_2313 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain BAMF_2314 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain BAMF_2314 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain BAMF_2315 PF00108 Thiolase, N-terminal domain BAMF_2315 PF02803 Thiolase, C-terminal domain BAMF_2316 PF03009 Glycerophosphoryl diester phosphodiesterase family BAMF_2317 PF01520 N-acetylmuramoyl-L-alanine amidase BAMF_2322 PF00724 NADH:flavin oxidoreductase / NADH oxidase family BAMF_2323 PF10676 Spore germination protein gerPA/gerPF BAMF_2324 PF10676 Spore germination protein gerPA/gerPF BAMF_2325 PF01168 Alanine racemase, N-terminal domain BAMF_2325 PF00842 Alanine racemase, C-terminal domain BAMF_2326 PF08769 Sporulation initiation factor Spo0A C terminal BAMF_2326 PF00072 Response regulator receiver domain BAMF_2327 PF05580 SpoIVB peptidase S55 BAMF_2327 PF17820 PDZ domain BAMF_2328 PF13476 AAA domain BAMF_2329 PF01316 Arginine repressor, DNA binding domain BAMF_2329 PF02863 Arginine repressor, C-terminal domain BAMF_2330 PF01479 S4 domain BAMF_2330 PF01728 FtsJ-like methyltransferase BAMF_2331 PF02779 Transketolase, pyrimidine binding domain BAMF_2331 PF13292 1-deoxy-D-xylulose-5-phosphate synthase BAMF_2331 PF02780 Transketolase, C-terminal domain BAMF_2332 PF00348 Polyprenyl synthetase BAMF_2333 PF02609 Exonuclease VII small subunit BAMF_2334 PF13742 OB-fold nucleic acid binding domain BAMF_2334 PF02601 Exonuclease VII, large subunit BAMF_2335 PF02882 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain BAMF_2335 PF00763 Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain BAMF_2336 PF01029 NusB family BAMF_2337 PF03780 Asp23 family, cell envelope-related function BAMF_2338 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain BAMF_2338 PF00289 Biotin carboxylase, N-terminal domain BAMF_2338 PF02785 Biotin carboxylase C-terminal domain BAMF_2339 PF00364 Biotin-requiring enzyme BAMF_2340 PF12685 SpoIIIAH-like protein BAMF_2342 PF09581 Stage III sporulation protein AF (Spore_III_AF) BAMF_2343 PF09546 Stage III sporulation protein AE (spore_III_AE) BAMF_2344 PF06686 Stage III sporulation protein AC/AD protein family BAMF_2345 PF06686 Stage III sporulation protein AC/AD protein family BAMF_2346 PF09548 Stage III sporulation protein AB (spore_III_AB) BAMF_2348 PF10942 Protein of unknown function (DUF2619) BAMF_2349 PF09285 Elongation factor P, C-terminal BAMF_2349 PF08207 Elongation factor P (EF-P) KOW-like domain BAMF_2349 PF01132 Elongation factor P (EF-P) OB domain BAMF_2350 PF00557 Metallopeptidase family M24 BAMF_2350 PF01321 Creatinase/Prolidase N-terminal domain BAMF_2351 PF11085 Conserved membrane protein YqhR BAMF_2352 PF07136 Protein of unknown function (DUF1385) BAMF_2354 PF01734 Patatin-like phospholipase BAMF_2355 PF01325 Iron dependent repressor, N-terminal DNA binding domain BAMF_2355 PF02742 Iron dependent repressor, metal binding and dimerisation domain BAMF_2356 PF03099 Biotin/lipoate A/B protein ligase family BAMF_2357 PF00581 Rhodanese-like domain BAMF_2358 PF02347 Glycine cleavage system P-protein BAMF_2359 PF02347 Glycine cleavage system P-protein BAMF_2360 PF01571 Aminomethyltransferase folate-binding domain BAMF_2360 PF08669 Glycine cleavage T-protein C-terminal barrel domain BAMF_2361 PF00271 Helicase conserved C-terminal domain BAMF_2361 PF00176 SNF2 family N-terminal domain BAMF_2362 PF11079 Bacterial protein YqhG of unknown function BAMF_2363 PF08671 Anti-repressor SinI BAMF_2364 PF01381 Helix-turn-helix BAMF_2364 PF08671 Anti-repressor SinI BAMF_2365 PF12389 Camelysin metallo-endopeptidase BAMF_2368 PF13028 Protein of unknown function (DUF3889) BAMF_2369 PF14038 YqzE-like protein BAMF_2370 PF14173 ComG operon protein 7 BAMF_2371 PF15980 Putative Competence protein ComGF BAMF_2372 PF07963 Prokaryotic N-terminal methylation motif BAMF_2373 PF07963 Prokaryotic N-terminal methylation motif BAMF_2374 PF00482 Type II secretion system (T2SS), protein F BAMF_2375 PF00437 Type II/IV secretion system protein BAMF_2376 PF01544 CorA-like Mg2+ transporter protein BAMF_2377 PF03471 Transporter associated domain BAMF_2377 PF01595 Cyclin M transmembrane N-terminal domain BAMF_2377 PF00571 CBS domain BAMF_2378 PF01740 STAS domain BAMF_2378 PF14361 RsbT co-antagonist protein rsbRD N-terminal domain BAMF_2379 PF03960 ArsC family BAMF_2380 PF11117 Protein of unknown function (DUF2626) BAMF_2381 PF00753 Metallo-beta-lactamase superfamily BAMF_2382 PF10958 Protein of unknown function (DUF2759) BAMF_2383 PF01910 Thiamine-binding protein BAMF_2385 PF00246 Zinc carboxypeptidase BAMF_2386 PF00480 ROK family BAMF_2387 PF06014 Bacterial protein of unknown function (DUF910) BAMF_2388 PF03553 Na+/H+ antiporter family BAMF_2390 PF01812 5-formyltetrahydrofolate cyclo-ligase family BAMF_2391 PF00471 Ribosomal protein L33 BAMF_2394 PF00005 ABC transporter BAMF_2395 PF00005 ABC transporter BAMF_2396 PF00528 Binding-protein-dependent transport system inner membrane component BAMF_2397 PF00528 Binding-protein-dependent transport system inner membrane component BAMF_2398 PF12849 PBP superfamily domain BAMF_2400 PF07690 Major Facilitator Superfamily BAMF_2401 PF02777 Iron/manganese superoxide dismutases, C-terminal domain BAMF_2401 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain BAMF_2402 PF04306 Protein of unknown function (DUF456) BAMF_2403 PF06691 Protein of unknown function (DUF1189) BAMF_2405 PF04551 GcpE protein BAMF_2408 PF01475 Ferric uptake regulator family BAMF_2409 PF02588 Uncharacterised 5xTM membrane BCR, YitT family COG1284 BAMF_2409 PF10035 Uncharacterized protein conserved in bacteria (DUF2179) BAMF_2410 PF11116 Protein of unknown function (DUF2624) BAMF_2411 PF01261 Xylose isomerase-like TIM barrel BAMF_2412 PF00270 DEAD/DEAH box helicase BAMF_2412 PF00271 Helicase conserved C-terminal domain BAMF_2413 PF14181 YqfQ-like protein BAMF_2414 PF02401 LytB protein BAMF_2415 PF01784 NIF3 (NGG1p interacting factor 3) BAMF_2416 PF04816 tRNA (adenine(22)-N(1))-methyltransferase BAMF_2417 PF13442 Cytochrome C oxidase, cbb3-type, subunit III BAMF_2418 PF04545 Sigma-70, region 4 BAMF_2418 PF04539 Sigma-70 region 3 BAMF_2418 PF03979 Sigma-70 factor, region 1.1 BAMF_2418 PF04542 Sigma-70 region 2 BAMF_2418 PF00140 Sigma-70 factor, region 1.2 BAMF_2419 PF01807 CHC2 zinc finger BAMF_2419 PF08275 DNA primase catalytic core, N-terminal domain BAMF_2419 PF10410 DnaB-helicase binding domain of primase BAMF_2420 PF02639 Uncharacterized BCR, YaiI/YqxD family COG1671 BAMF_2421 PF03618 Kinase/pyrophosphorylase BAMF_2422 PF00571 CBS domain BAMF_2422 PF08279 HTH domain BAMF_2423 PF02092 Glycyl-tRNA synthetase beta subunit BAMF_2424 PF02091 Glycyl-tRNA synthetase alpha subunit BAMF_2425 PF11967 Recombination protein O N terminal BAMF_2425 PF02565 Recombination protein O C terminal BAMF_2426 PF07650 KH domain BAMF_2426 PF01926 50S ribosome-binding GTPase BAMF_2427 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region BAMF_2428 PF01219 Prokaryotic diacylglycerol kinase BAMF_2429 PF02130 Uncharacterized protein family UPF0054 BAMF_2430 PF01966 HD domain BAMF_2430 PF07698 7TM receptor with intracellular HD hydrolase BAMF_2430 PF07697 7TM-HD extracellular BAMF_2431 PF02562 PhoH-like protein BAMF_2432 PF06898 Putative stage IV sporulation protein YqfD BAMF_2433 PF07873 YabP family BAMF_2435 PF12127 SigmaW regulon antibacterial BAMF_2436 PF01957 NfeD-like C-terminal, partner-binding BAMF_2436 PF01972 Serine dehydrogenase proteinase BAMF_2437 PF09424 Yqey-like protein BAMF_2438 PF01165 Ribosomal protein S21 BAMF_2439 PF02690 Na+/Pi-cotransporter BAMF_2440 PF04055 Radical SAM superfamily BAMF_2440 PF00919 Uncharacterized protein family UPF0004 BAMF_2440 PF01938 TRAM domain BAMF_2441 PF04452 RNA methyltransferase BAMF_2443 PF00226 DnaJ domain BAMF_2443 PF01556 DnaJ C terminal domain BAMF_2443 PF00684 DnaJ central domain BAMF_2444 PF00012 Hsp70 protein BAMF_2445 PF01025 GrpE BAMF_2446 PF01628 HrcA protein C terminal domain BAMF_2447 PF04055 Radical SAM superfamily BAMF_2447 PF06969 HemN C-terminal domain BAMF_2448 PF00679 Elongation factor G C-terminus BAMF_2448 PF00009 Elongation factor Tu GTP binding domain BAMF_2448 PF03144 Elongation factor Tu domain 2 BAMF_2448 PF06421 GTP-binding protein LepA C-terminus BAMF_2449 PF12438 Protein of unknown function (DUF3679) BAMF_2450 PF07454 Stage II sporulation protein P (SpoIIP) BAMF_2451 PF03418 Germination protease BAMF_2452 PF01649 Ribosomal protein S20 BAMF_2453 PF06144 DNA polymerase III, delta subunit BAMF_2454 PF14141 YqzM-like protein BAMF_2455 PF13567 Domain of unknown function (DUF4131) BAMF_2455 PF03772 Competence protein BAMF_2455 PF00753 Metallo-beta-lactamase superfamily BAMF_2456 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region BAMF_2457 PF10531 SLBB domain BAMF_2458 PF14748 Pyrroline-5-carboxylate reductase dimerisation BAMF_2458 PF03807 NADP oxidoreductase coenzyme F420-dependent BAMF_2459 PF13649 Methyltransferase domain BAMF_2461 PF01966 HD domain BAMF_2462 PF01467 Cytidylyltransferase-like BAMF_2463 PF01985 CRS1 / YhbY (CRM) domain BAMF_2464 PF18317 Shikimate 5'-dehydrogenase C-terminal domain BAMF_2464 PF08501 Shikimate dehydrogenase substrate binding domain BAMF_2464 PF01488 Shikimate / quinate 5-dehydrogenase BAMF_2465 PF01926 50S ribosome-binding GTPase BAMF_2467 PF08970 Sporulation inhibitor A BAMF_2468 PF00657 GDSL-like Lipase/Acylhydrolase BAMF_2469 PF01522 Polysaccharide deacetylase BAMF_2470 PF09335 SNARE associated Golgi protein BAMF_2472 PF04545 Sigma-70, region 4 BAMF_2472 PF04542 Sigma-70 region 2 BAMF_2473 PF07508 Recombinase BAMF_2473 PF00239 Resolvase, N terminal domain BAMF_2473 PF13408 Recombinase zinc beta ribbon domain BAMF_2477 PF07690 Major Facilitator Superfamily BAMF_2478 PF00117 Glutamine amidotransferase class-I BAMF_2479 PF04715 Anthranilate synthase component I, N terminal region BAMF_2479 PF00425 chorismate binding enzyme BAMF_2481 PF00550 Phosphopantetheine attachment site BAMF_2481 PF00668 Condensation domain BAMF_2481 PF13193 AMP-binding enzyme C-terminal domain BAMF_2481 PF00501 AMP-binding enzyme BAMF_2483 PF00464 Serine hydroxymethyltransferase BAMF_2486 PF08279 HTH domain BAMF_2486 PF13280 WYL domain BAMF_2487 PF01965 DJ-1/PfpI family BAMF_2492 PF04542 Sigma-70 region 2 BAMF_2492 PF04545 Sigma-70, region 4 BAMF_2493 PF10934 Protein of unknown function (DUF2634) BAMF_2494 PF01177 Asp/Glu/Hydantoin racemase BAMF_2495 PF10844 Protein of unknown function (DUF2577) BAMF_2496 PF00248 Aldo/keto reductase family BAMF_2498 PF05065 Phage capsid family BAMF_2499 PF03837 RecT family BAMF_2503 PF12833 Helix-turn-helix domain BAMF_2503 PF06445 GyrI-like small molecule binding domain BAMF_2507 PF07690 Major Facilitator Superfamily BAMF_2508 PF00583 Acetyltransferase (GNAT) family BAMF_2509 PF05163 DinB family BAMF_2514 PF01418 Helix-turn-helix domain, rpiR family BAMF_2514 PF01380 SIS domain BAMF_2515 PF01238 Phosphomannose isomerase type I BAMF_2516 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 BAMF_2516 PF02378 Phosphotransferase system, EIIC BAMF_2516 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit BAMF_2517 PF08279 HTH domain BAMF_2517 PF00874 PRD domain BAMF_2517 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 BAMF_2517 PF05043 Mga helix-turn-helix domain BAMF_2518 PF12706 Beta-lactamase superfamily domain BAMF_2519 PF04073 Aminoacyl-tRNA editing domain BAMF_2520 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family BAMF_2520 PF03466 LysR substrate binding domain BAMF_2521 PF07690 Major Facilitator Superfamily BAMF_2522 PF00067 Cytochrome P450 BAMF_2522 PF00175 Oxidoreductase NAD-binding domain BAMF_2522 PF00258 Flavodoxin BAMF_2522 PF00667 FAD binding domain BAMF_2523 PF16295 Tetracyclin repressor-like, C-terminal domain BAMF_2523 PF00440 Bacterial regulatory proteins, tetR family BAMF_2524 PF08241 Methyltransferase domain BAMF_2526 PF09501 Probable sporulation protein (Bac_small_yrzI) BAMF_2528 PF01226 Formate/nitrite transporter BAMF_2529 PF10057 Uncharacterized conserved protein (DUF2294) BAMF_2530 PF01568 Molydopterin dinucleotide binding domain BAMF_2530 PF00384 Molybdopterin oxidoreductase BAMF_2530 PF10588 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region BAMF_2530 PF04879 Molybdopterin oxidoreductase Fe4S4 domain BAMF_2530 PF00037 4Fe-4S binding domain BAMF_2531 PF07849 Protein of unknown function (DUF1641) BAMF_2532 PF14143 YrhC-like protein BAMF_2533 PF01053 Cys/Met metabolism PLP-dependent enzyme BAMF_2534 PF00291 Pyridoxal-phosphate dependent enzyme BAMF_2535 PF01048 Phosphorylase superfamily BAMF_2536 PF13649 Methyltransferase domain BAMF_2537 PF10750 Protein of unknown function (DUF2536) BAMF_2538 PF07423 Domain of unknown function (DUF1510) BAMF_2539 PF00905 Penicillin binding protein transpeptidase domain BAMF_2539 PF03717 Penicillin-binding Protein dimerisation domain BAMF_2540 PF01272 Transcription elongation factor, GreA/GreB, C-term BAMF_2540 PF03449 Transcription elongation factor, N-terminal BAMF_2541 PF00485 Phosphoribulokinase / Uridine kinase family BAMF_2545 PF02618 YceG-like family BAMF_2546 PF06949 Protein of unknown function (DUF1292) BAMF_2547 PF03652 Holliday junction resolvase BAMF_2548 PF06135 IreB regulatory phosphoprotein BAMF_2549 PF02272 DHHA1 domain BAMF_2549 PF01411 tRNA synthetases class II (A) BAMF_2549 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain BAMF_2550 PF01594 AI-2E family transporter BAMF_2551 PF00005 ABC transporter BAMF_2552 PF00497 Bacterial extracellular solute-binding proteins, family 3 BAMF_2553 PF00528 Binding-protein-dependent transport system inner membrane component BAMF_2554 PF00528 Binding-protein-dependent transport system inner membrane component BAMF_2555 PF13056 Protein of unknown function (DUF3918) BAMF_2557 PF05239 PRC-barrel domain BAMF_2558 PF18335 ATP-dependent RecD-like DNA helicase SH3 domain BAMF_2558 PF13538 UvrD-like helicase C-terminal domain BAMF_2558 PF14490 Helix-hairpin-helix containing domain BAMF_2559 PF13181 Tetratricopeptide repeat BAMF_2559 PF07719 Tetratricopeptide repeat BAMF_2561 PF00266 Aminotransferase class-V BAMF_2562 PF02082 Transcriptional regulator BAMF_2563 PF12002 MgsA AAA+ ATPase C terminal BAMF_2563 PF16193 AAA C-terminal domain BAMF_2563 PF05496 Holliday junction DNA helicase RuvB P-loop domain BAMF_2564 PF00899 ThiF family BAMF_2565 PF01336 OB-fold nucleic acid binding domain BAMF_2565 PF00152 tRNA synthetases class II (D, K and N) BAMF_2565 PF02938 GAD domain BAMF_2566 PF03129 Anticodon binding domain BAMF_2566 PF13393 Histidyl-tRNA synthetase BAMF_2567 PF17449 Uncharacterized YrzK-like BAMF_2568 PF01520 N-acetylmuramoyl-L-alanine amidase BAMF_2568 PF08239 Bacterial SH3 domain BAMF_2569 PF02580 D-Tyr-tRNA(Tyr) deacylase BAMF_2570 PF02824 TGS domain BAMF_2570 PF04607 Region found in RelA / SpoT proteins BAMF_2570 PF13291 ACT domain BAMF_2571 PF00156 Phosphoribosyl transferase domain BAMF_2572 PF01368 DHH family BAMF_2572 PF17768 RecJ OB domain BAMF_2572 PF10141 Single-strand DNA-specific exonuclease, C terminal domain BAMF_2572 PF02272 DHHA1 domain BAMF_2573 PF06305 Lipopolysaccharide assembly protein A domain BAMF_2574 PF02080 TrkA-C domain BAMF_2575 PF02355 Protein export membrane protein BAMF_2575 PF07549 SecD/SecF GG Motif BAMF_2576 PF13797 Post-transcriptional regulator BAMF_2577 PF14667 Polysaccharide biosynthesis C-terminal domain BAMF_2577 PF01943 Polysaccharide biosynthesis protein BAMF_2578 PF04239 Protein of unknown function (DUF421) BAMF_2579 PF12670 Protein of unknown function (DUF3792) BAMF_2580 PF02699 Preprotein translocase subunit BAMF_2581 PF01702 Queuine tRNA-ribosyltransferase BAMF_2582 PF02547 Queuosine biosynthesis protein BAMF_2583 PF11146 Protein of unknown function (DUF2905) BAMF_2584 PF05491 RuvB C-terminal winged helix domain BAMF_2584 PF05496 Holliday junction DNA helicase RuvB P-loop domain BAMF_2584 PF17864 RuvB AAA lid domain BAMF_2585 PF01330 RuvA N terminal domain BAMF_2585 PF07499 RuvA, C-terminal domain BAMF_2586 PF08977 Bypass of Forespore C, N terminal BAMF_2586 PF08955 BofC C-terminal domain BAMF_2588 PF09580 Sporulation lipoprotein YhcN/YlaJ (Spore_YhcN_YlaJ) BAMF_2590 PF01476 LysM domain BAMF_2591 PF02445 Quinolinate synthetase A protein BAMF_2592 PF02749 Quinolinate phosphoribosyl transferase, N-terminal domain BAMF_2592 PF01729 Quinolinate phosphoribosyl transferase, C-terminal domain BAMF_2593 PF00890 FAD binding domain BAMF_2593 PF02910 Fumarate reductase flavoprotein C-term BAMF_2594 PF00266 Aminotransferase class-V BAMF_2595 PF02829 3H domain BAMF_2595 PF08279 HTH domain BAMF_2596 PF01842 ACT domain BAMF_2596 PF00800 Prephenate dehydratase BAMF_2597 PF01842 ACT domain BAMF_2598 PF01018 GTP1/OBG BAMF_2598 PF01926 50S ribosome-binding GTPase BAMF_2598 PF09269 Domain of unknown function (DUF1967) BAMF_2599 PF14689 Sensor_kinase_SpoOB-type, alpha-helical domain BAMF_2599 PF14682 Sporulation initiation phospho-transferase B, C-terminal BAMF_2600 PF01016 Ribosomal L27 protein BAMF_2601 PF04327 Cysteine protease Prp BAMF_2602 PF00829 Ribosomal prokaryotic L21 protein BAMF_2603 PF02163 Peptidase family M50 BAMF_2604 PF01551 Peptidase family M23 BAMF_2605 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain BAMF_2606 PF03775 Septum formation inhibitor MinC, C-terminal domain BAMF_2607 PF04093 rod shape-determining protein MreD BAMF_2608 PF04085 rod shape-determining protein MreC BAMF_2610 PF04002 RadC-like JAB domain BAMF_2611 PF02545 Maf-like protein BAMF_2612 PF05036 Sporulation related domain BAMF_2613 PF01478 Type IV leader peptidase family BAMF_2613 PF06750 Bacterial Peptidase A24 N-terminal domain BAMF_2614 PF08245 Mur ligase middle domain BAMF_2614 PF02875 Mur ligase family, glutamate ligase domain BAMF_2615 PF10458 Valyl tRNA synthetase tRNA binding arm BAMF_2615 PF00133 tRNA synthetases class I (I, L, M and V) BAMF_2615 PF08264 Anticodon-binding domain of tRNA BAMF_2618 PF01476 LysM domain BAMF_2619 PF00202 Aminotransferase class-III BAMF_2620 PF00490 Delta-aminolevulinic acid dehydratase BAMF_2621 PF02602 Uroporphyrinogen-III synthase HemD BAMF_2622 PF03900 Porphobilinogen deaminase, C-terminal domain BAMF_2622 PF01379 Porphobilinogen deaminase, dipyromethane cofactor binding domain BAMF_2623 PF01578 Cytochrome C assembly protein BAMF_2624 PF05201 Glutamyl-tRNAGlu reductase, N-terminal domain BAMF_2624 PF00745 Glutamyl-tRNAGlu reductase, dimerisation domain BAMF_2624 PF01488 Shikimate / quinate 5-dehydrogenase BAMF_2626 PF01926 50S ribosome-binding GTPase BAMF_2627 PF00004 ATPase family associated with various cellular activities (AAA) BAMF_2627 PF05362 Lon protease (S16) C-terminal proteolytic domain BAMF_2627 PF02190 ATP-dependent protease La (LON) substrate-binding domain BAMF_2628 PF05362 Lon protease (S16) C-terminal proteolytic domain BAMF_2628 PF00004 ATPase family associated with various cellular activities (AAA) BAMF_2629 PF06689 ClpX C4-type zinc finger BAMF_2629 PF07724 AAA domain (Cdc48 subfamily) BAMF_2629 PF10431 C-terminal, D2-small domain, of ClpB protein BAMF_2630 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase BAMF_2630 PF05698 Bacterial trigger factor protein (TF) C-terminus BAMF_2630 PF05697 Bacterial trigger factor protein (TF) BAMF_2632 PF00694 Aconitase C-terminal domain BAMF_2633 PF00330 Aconitase family (aconitate hydratase) BAMF_2634 PF00180 Isocitrate/isopropylmalate dehydrogenase BAMF_2635 PF08502 LeuA allosteric (dimerisation) domain BAMF_2635 PF00682 HMGL-like BAMF_2636 PF07991 Acetohydroxy acid isomeroreductase, NADPH-binding domain BAMF_2636 PF01450 Acetohydroxy acid isomeroreductase, catalytic domain BAMF_2637 PF10369 Small subunit of acetolactate synthase BAMF_2637 PF01842 ACT domain BAMF_2638 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain BAMF_2638 PF00205 Thiamine pyrophosphate enzyme, central domain BAMF_2638 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain BAMF_2641 PF12850 Calcineurin-like phosphoesterase superfamily domain BAMF_2642 PF01725 Ham1 family BAMF_2643 PF03725 3' exoribonuclease family, domain 2 BAMF_2643 PF01138 3' exoribonuclease family, domain 1 BAMF_2644 PF10646 Sporulation and spore germination BAMF_2645 PF01177 Asp/Glu/Hydantoin racemase BAMF_2646 PF01047 MarR family BAMF_2647 PF00196 Bacterial regulatory proteins, luxR family BAMF_2648 PF03061 Thioesterase superfamily BAMF_2649 PF13085 2Fe-2S iron-sulfur cluster binding domain BAMF_2649 PF13183 4Fe-4S dicluster domain BAMF_2650 PF00890 FAD binding domain BAMF_2650 PF02910 Fumarate reductase flavoprotein C-term BAMF_2651 PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit BAMF_2652 PF10702 Protein of unknown function (DUF2507) BAMF_2653 PF00696 Amino acid kinase family BAMF_2653 PF13840 ACT domain BAMF_2653 PF01842 ACT domain BAMF_2654 PF01541 GIY-YIG catalytic domain BAMF_2654 PF08459 UvrC Helix-hairpin-helix N-terminal BAMF_2654 PF02151 UvrB/uvrC motif BAMF_2655 PF00085 Thioredoxin BAMF_2656 PF06964 Alpha-L-arabinofuranosidase C-terminal domain BAMF_2657 PF00766 Electron transfer flavoprotein FAD-binding domain BAMF_2657 PF01012 Electron transfer flavoprotein domain BAMF_2658 PF01012 Electron transfer flavoprotein domain BAMF_2659 PF00378 Enoyl-CoA hydratase/isomerase BAMF_2660 PF08359 YsiA-like protein, C-terminal region BAMF_2660 PF00440 Bacterial regulatory proteins, tetR family BAMF_2661 PF13193 AMP-binding enzyme C-terminal domain BAMF_2661 PF00501 AMP-binding enzyme BAMF_2662 PF10924 Protein of unknown function (DUF2711) BAMF_2663 PF03994 Domain of Unknown Function (DUF350) BAMF_2664 PF00488 MutS domain V BAMF_2664 PF01713 Smr domain BAMF_2665 PF02811 PHP domain BAMF_2665 PF14716 Helix-hairpin-helix domain BAMF_2665 PF14791 DNA polymerase beta thumb BAMF_2666 PF02674 Colicin V production protein BAMF_2667 PF05164 Cell division protein ZapA BAMF_2668 PF01351 Ribonuclease HII BAMF_2668 PF11858 Domain of unknown function (DUF3378) BAMF_2669 PF17759 Phenylalanyl tRNA synthetase beta chain CLM domain BAMF_2669 PF01588 Putative tRNA binding domain BAMF_2669 PF03147 Ferredoxin-fold anticodon binding domain BAMF_2669 PF03484 tRNA synthetase B5 domain BAMF_2669 PF03483 B3/4 domain BAMF_2670 PF01409 tRNA synthetases class II core domain (F) BAMF_2670 PF02912 Aminoacyl tRNA synthetase class II, N-terminal domain BAMF_2671 PF08032 RNA 2'-O ribose methyltransferase substrate binding BAMF_2671 PF00588 SpoU rRNA Methylase family BAMF_2672 PF14098 Small, acid-soluble spore protein I BAMF_2673 PF17853 GGDEF-like domain BAMF_2673 PF05651 Putative sugar diacid recognition BAMF_2673 PF13556 PucR C-terminal helix-turn-helix domain BAMF_2674 PF02913 FAD linked oxidases, C-terminal domain BAMF_2674 PF01565 FAD binding domain BAMF_2675 PF02754 Cysteine-rich domain BAMF_2675 PF13183 4Fe-4S dicluster domain BAMF_2676 PF02554 Carbon starvation protein CstA BAMF_2676 PF13722 5TM C-terminal transporter carbon starvation CstA BAMF_2677 PF06964 Alpha-L-arabinofuranosidase C-terminal domain BAMF_2678 PF00528 Binding-protein-dependent transport system inner membrane component BAMF_2679 PF00528 Binding-protein-dependent transport system inner membrane component BAMF_2680 PF01547 Bacterial extracellular solute-binding protein BAMF_2681 PF13685 Iron-containing alcohol dehydrogenase BAMF_2682 PF13344 Haloacid dehalogenase-like hydrolase BAMF_2683 PF00596 Class II Aldolase and Adducin N-terminal domain BAMF_2684 PF02782 FGGY family of carbohydrate kinases, C-terminal domain BAMF_2684 PF00370 FGGY family of carbohydrate kinases, N-terminal domain BAMF_2685 PF02610 L-arabinose isomerase BAMF_2685 PF11762 L-arabinose isomerase C-terminal domain BAMF_2686 PF04616 Glycosyl hydrolases family 43 BAMF_2687 PF05343 M42 glutamyl aminopeptidase BAMF_2689 PF06961 Protein of unknown function (DUF1294) BAMF_2690 PF00453 Ribosomal protein L20 BAMF_2691 PF01632 Ribosomal protein L35 BAMF_2692 PF05198 Translation initiation factor IF-3, N-terminal domain BAMF_2692 PF00707 Translation initiation factor IF-3, C-terminal domain BAMF_2693 PF04172 LrgB-like family BAMF_2694 PF03788 LrgA family BAMF_2695 PF00072 Response regulator receiver domain BAMF_2695 PF04397 LytTr DNA-binding domain BAMF_2696 PF06580 Histidine kinase BAMF_2696 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BAMF_2696 PF07694 5TMR of 5TMR-LYT BAMF_2698 PF02824 TGS domain BAMF_2698 PF03129 Anticodon binding domain BAMF_2698 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain BAMF_2698 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) BAMF_2699 PF08812 YtxC-like family BAMF_2700 PF09335 SNARE associated Golgi protein BAMF_2701 PF07319 Primosomal protein DnaI N-terminus BAMF_2701 PF01695 IstB-like ATP binding protein BAMF_2702 PF07261 Replication initiation and membrane attachment BAMF_2703 PF03477 ATP cone domain BAMF_2704 PF02675 S-adenosylmethionine decarboxylase BAMF_2705 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain BAMF_2705 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain BAMF_2706 PF01638 HxlR-like helix-turn-helix BAMF_2707 PF07690 Major Facilitator Superfamily BAMF_2708 PF00248 Aldo/keto reductase family BAMF_2709 PF01121 Dephospho-CoA kinase BAMF_2710 PF02659 Putative manganese efflux pump BAMF_2711 PF01149 Formamidopyrimidine-DNA glycosylase N-terminal domain BAMF_2711 PF06827 Zinc finger found in FPG and IleRS BAMF_2711 PF06831 Formamidopyrimidine-DNA glycosylase H2TH domain BAMF_2712 PF01367 5'-3' exonuclease, C-terminal SAM fold BAMF_2712 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain BAMF_2712 PF00476 DNA polymerase family A BAMF_2713 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BAMF_2713 PF00512 His Kinase A (phospho-acceptor) domain BAMF_2713 PF00989 PAS fold BAMF_2713 PF16736 Single Cache-like BAMF_2714 PF00072 Response regulator receiver domain BAMF_2714 PF00486 Transcriptional regulatory protein, C terminal BAMF_2715 PF00056 lactate/malate dehydrogenase, NAD binding domain BAMF_2715 PF02866 lactate/malate dehydrogenase, alpha/beta C-terminal domain BAMF_2716 PF00180 Isocitrate/isopropylmalate dehydrogenase BAMF_2717 PF00285 Citrate synthase, C-terminal domain BAMF_2718 PF04284 Protein of unknown function (DUF441) BAMF_2719 PF01594 AI-2E family transporter BAMF_2720 PF04186 FxsA cytoplasmic membrane protein BAMF_2721 PF00224 Pyruvate kinase, barrel domain BAMF_2721 PF02887 Pyruvate kinase, alpha/beta domain BAMF_2721 PF00391 PEP-utilising enzyme, mobile domain BAMF_2722 PF00365 Phosphofructokinase BAMF_2723 PF03255 Acetyl co-enzyme A carboxylase carboxyltransferase alpha subunit BAMF_2724 PF01039 Carboxyl transferase domain BAMF_2724 PF17848 Acetyl-coA carboxylase zinc finger domain BAMF_2725 PF03949 Malic enzyme, NAD binding domain BAMF_2725 PF00390 Malic enzyme, N-terminal domain BAMF_2726 PF14579 Helix-hairpin-helix motif BAMF_2726 PF02811 PHP domain BAMF_2726 PF01336 OB-fold nucleic acid binding domain BAMF_2726 PF17657 Bacterial DNA polymerase III alpha subunit finger domain BAMF_2726 PF07733 Bacterial DNA polymerase III alpha NTPase domain BAMF_2727 PF14034 Sporulation protein YtrH BAMF_2730 PF01368 DHH family BAMF_2730 PF02272 DHHA1 domain BAMF_2731 PF14007 YtpI-like protein BAMF_2732 PF00571 CBS domain BAMF_2732 PF00392 Bacterial regulatory proteins, gntR family BAMF_2732 PF07085 DRTGG domain BAMF_2732 PF03061 Thioesterase superfamily BAMF_2736 PF14698 Argininosuccinate lyase C-terminal BAMF_2736 PF00206 Lyase BAMF_2737 PF00764 Arginosuccinate synthase BAMF_2738 PF00994 Probable molybdopterin binding domain BAMF_2739 PF00871 Acetokinase family BAMF_2740 PF02384 N-6 DNA Methylase BAMF_2741 PF08534 Redoxin BAMF_2742 PF09579 Sporulation protein YtfJ (Spore_YtfJ) BAMF_2743 PF11167 Protein of unknown function (DUF2953) BAMF_2744 PF06271 RDD family BAMF_2745 PF01343 Peptidase family S49 BAMF_2746 PF01513 ATP-NAD kinase BAMF_2747 PF07969 Amidohydrolase family BAMF_2748 PF13193 AMP-binding enzyme C-terminal domain BAMF_2748 PF00501 AMP-binding enzyme BAMF_2749 PF00269 Small, acid-soluble spore proteins, alpha/beta type BAMF_2750 PF02568 Thiamine biosynthesis protein (ThiI) BAMF_2750 PF02926 THUMP domain BAMF_2751 PF00266 Aminotransferase class-V BAMF_2752 PF05525 Branched-chain amino acid transport protein BAMF_2753 PF06160 Septation ring formation regulator, EzrA BAMF_2754 PF02811 PHP domain BAMF_2755 PF00440 Bacterial regulatory proteins, tetR family BAMF_2756 PF13185 GAF domain BAMF_2757 PF00990 Diguanylate cyclase, GGDEF domain BAMF_2758 PF01479 S4 domain BAMF_2758 PF00163 Ribosomal protein S4/S9 N-terminal domain BAMF_2759 PF00970 Oxidoreductase FAD-binding domain BAMF_2759 PF00042 Globin BAMF_2759 PF00175 Oxidoreductase NAD-binding domain BAMF_2760 PF01965 DJ-1/PfpI family BAMF_2762 PF01545 Cation efflux family BAMF_2762 PF16916 Dimerisation domain of Zinc Transporter BAMF_2763 PF11495 Archaeal transcriptional regulator TrmB BAMF_2763 PF01978 Sugar-specific transcriptional regulator TrmB BAMF_2764 PF03591 AzlC protein BAMF_2767 PF01479 S4 domain BAMF_2767 PF00579 tRNA synthetases class I (W and Y) BAMF_2768 PF13193 AMP-binding enzyme C-terminal domain BAMF_2768 PF00501 AMP-binding enzyme BAMF_2769 PF00583 Acetyltransferase (GNAT) family BAMF_2770 PF00571 CBS domain BAMF_2771 PF00850 Histone deacetylase domain BAMF_2772 PF00691 OmpA family BAMF_2772 PF13677 Membrane MotB of proton-channel complex MotA/MotB BAMF_2773 PF01618 MotA/TolQ/ExbB proton channel family BAMF_2774 PF00356 Bacterial regulatory proteins, lacI family BAMF_2775 PF00793 DAHP synthetase I family BAMF_2775 PF01817 Chorismate mutase type II BAMF_2776 PF11009 Protein of unknown function (DUF2847) BAMF_2777 PF12732 YtxH-like protein BAMF_2778 PF06103 Bacterial protein of unknown function (DUF948) BAMF_2779 PF08245 Mur ligase middle domain BAMF_2779 PF01225 Mur ligase family, catalytic domain BAMF_2779 PF02875 Mur ligase family, glutamate ligase domain BAMF_2780 PF17854 FtsK alpha domain BAMF_2780 PF01580 FtsK/SpoIIIE family BAMF_2780 PF09397 Ftsk gamma domain BAMF_2781 PF14794 Domain of unknown function (DUF4479) BAMF_2781 PF01588 Putative tRNA binding domain BAMF_2782 PF07285 Protein of unknown function (DUF1444) BAMF_2783 PF00085 Thioredoxin BAMF_2784 PF11071 Nucleoside 2-deoxyribosyltransferase YtoQ BAMF_2785 PF05343 M42 glutamyl aminopeptidase BAMF_2786 PF03413 Peptidase propeptide and YPEB domain BAMF_2787 PF00390 Malic enzyme, N-terminal domain BAMF_2787 PF03949 Malic enzyme, NAD binding domain BAMF_2788 PF00390 Malic enzyme, N-terminal domain BAMF_2788 PF03949 Malic enzyme, NAD binding domain BAMF_2789 PF00753 Metallo-beta-lactamase superfamily BAMF_2790 PF02390 Putative methyltransferase BAMF_2791 PF14165 YtzH-like protein BAMF_2792 PF01636 Phosphotransferase enzyme family BAMF_2793 PF00781 Diacylglycerol kinase catalytic domain BAMF_2796 PF00291 Pyridoxal-phosphate dependent enzyme BAMF_2797 PF01546 Peptidase family M20/M25/M40 BAMF_2798 PF00860 Permease family BAMF_2799 PF05975 Bacterial ABC transporter protein EcsB BAMF_2800 PF00005 ABC transporter BAMF_2801 PF08220 DeoR-like helix-turn-helix domain BAMF_2802 PF01479 S4 domain BAMF_2802 PF00849 RNA pseudouridylate synthase BAMF_2803 PF01943 Polysaccharide biosynthesis protein BAMF_2803 PF14667 Polysaccharide biosynthesis C-terminal domain BAMF_2805 PF02028 BCCT, betaine/carnitine/choline family transporter BAMF_2806 PF10957 Sporulation protein Cse60 BAMF_2811 PF11975 Family 4 glycosyl hydrolase C-terminal domain BAMF_2811 PF02056 Family 4 glycosyl hydrolase BAMF_2813 PF00581 Rhodanese-like domain BAMF_2814 PF13603 Leucyl-tRNA synthetase, Domain 2 BAMF_2814 PF09334 tRNA synthetases class I (M) BAMF_2814 PF08264 Anticodon-binding domain of tRNA BAMF_2814 PF00133 tRNA synthetases class I (I, L, M and V) BAMF_2815 PF14074 Protein of unknown function (DUF4257) BAMF_2816 PF13426 PAS domain BAMF_2816 PF01740 STAS domain BAMF_2817 PF07690 Major Facilitator Superfamily BAMF_2818 PF09529 Integral membrane protein (intg_mem_TP0381) BAMF_2819 PF02687 FtsX-like permease family BAMF_2820 PF00005 ABC transporter BAMF_2821 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BAMF_2822 PF00072 Response regulator receiver domain BAMF_2822 PF00486 Transcriptional regulatory protein, C terminal BAMF_2823 PF12704 MacB-like periplasmic core domain BAMF_2823 PF02687 FtsX-like permease family BAMF_2824 PF00005 ABC transporter BAMF_2828 PF00005 ABC transporter BAMF_2829 PF00392 Bacterial regulatory proteins, gntR family BAMF_2830 PF10732 Protein of unknown function (DUF2524) BAMF_2831 PF04055 Radical SAM superfamily BAMF_2831 PF16199 Radical_SAM C-terminal domain BAMF_2832 PF06962 Putative rRNA methylase BAMF_2833 PF10776 Protein of unknown function (DUF2600) BAMF_2834 PF12146 Serine aminopeptidase, S33 BAMF_2835 PF00132 Bacterial transferase hexapeptide (six repeats) BAMF_2836 PF00324 Amino acid permease BAMF_2837 PF13537 Glutamine amidotransferase domain BAMF_2837 PF00733 Asparagine synthase BAMF_2838 PF02772 S-adenosylmethionine synthetase, central domain BAMF_2838 PF02773 S-adenosylmethionine synthetase, C-terminal domain BAMF_2838 PF00438 S-adenosylmethionine synthetase, N-terminal domain BAMF_2839 PF01293 Phosphoenolpyruvate carboxykinase BAMF_2840 PF10763 Protein of unknown function (DUF2584) BAMF_2841 PF00326 Prolyl oligopeptidase family BAMF_2843 PF00005 ABC transporter BAMF_2844 PF00528 Binding-protein-dependent transport system inner membrane component BAMF_2845 PF00293 NUDIX domain BAMF_2846 PF05105 Bacteriophage holin family BAMF_2847 PF00210 Ferritin-like domain BAMF_2849 PF13115 YtkA-like BAMF_2850 PF02664 S-Ribosylhomocysteinase (LuxS) BAMF_2851 PF01809 Putative membrane protein insertion efficiency factor BAMF_2852 PF00484 Carbonic anhydrase BAMF_2853 PF01197 Ribosomal protein L31 BAMF_2854 PF01654 Cytochrome bd terminal oxidase subunit I BAMF_2855 PF02322 Cytochrome bd terminal oxidase subunit II BAMF_2856 PF07561 Domain of Unknown Function (DUF1540) BAMF_2858 PF13378 Enolase C-terminal domain-like BAMF_2858 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain BAMF_2859 PF13193 AMP-binding enzyme C-terminal domain BAMF_2859 PF00501 AMP-binding enzyme BAMF_2860 PF00378 Enoyl-CoA hydratase/isomerase BAMF_2861 PF00561 alpha/beta hydrolase fold BAMF_2862 PF16582 Middle domain of thiamine pyrophosphate BAMF_2862 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain BAMF_2862 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain BAMF_2863 PF00425 chorismate binding enzyme BAMF_2864 PF01258 Prokaryotic dksA/traR C4-type zinc finger BAMF_2865 PF03073 TspO/MBR family BAMF_2866 PF09515 Thiamine transporter protein (Thia_YuaJ) BAMF_2867 PF15975 Flotillin BAMF_2867 PF01145 SPFH domain / Band 7 family BAMF_2869 PF12867 DinB superfamily BAMF_2871 PF00465 Iron-containing alcohol dehydrogenase BAMF_2874 PF17735 Biofilm surface layer A BAMF_2875 PF02254 TrkA-N domain BAMF_2875 PF02080 TrkA-C domain BAMF_2876 PF01832 Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase BAMF_2876 PF13457 GW (Gly-Tryp) dipeptide domain BAMF_2877 PF00970 Oxidoreductase FAD-binding domain BAMF_2877 PF00042 Globin BAMF_2877 PF00175 Oxidoreductase NAD-binding domain BAMF_2881 PF13176 Tetratricopeptide repeat BAMF_2881 PF18801 response regulator aspartate phosphatase H, N terminal BAMF_2889 PF01510 N-acetylmuramoyl-L-alanine amidase BAMF_2890 PF05105 Bacteriophage holin family BAMF_2894 PF11962 Peptidase_G2, IMC autoproteolytic cleavage domain BAMF_2894 PF12708 Pectate lyase superfamily protein BAMF_2897 PF01464 Transglycosylase SLT domain BAMF_2915 PF00589 Phage integrase family BAMF_2915 PF14659 Phage integrase, N-terminal SAM-like domain BAMF_2916 PF02673 Bacitracin resistance protein BacA BAMF_2917 PF01594 AI-2E family transporter BAMF_2918 PF01408 Oxidoreductase family, NAD-binding Rossmann fold BAMF_2918 PF02894 Oxidoreductase family, C-terminal alpha/beta domain BAMF_2919 PF01965 DJ-1/PfpI family BAMF_2920 PF02743 Cache domain BAMF_2920 PF00672 HAMP domain BAMF_2920 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain BAMF_2921 PF00672 HAMP domain BAMF_2921 PF02743 Cache domain BAMF_2921 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain BAMF_2922 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain BAMF_2922 PF00672 HAMP domain BAMF_2922 PF02743 Cache domain BAMF_2923 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain BAMF_2923 PF00672 HAMP domain BAMF_2923 PF02743 Cache domain BAMF_2926 PF03060 Nitronate monooxygenase BAMF_2927 PF00128 Alpha amylase, catalytic domain BAMF_2927 PF16657 Maltogenic Amylase, C-terminal domain BAMF_2928 PF01595 Cyclin M transmembrane N-terminal domain BAMF_2928 PF03471 Transporter associated domain BAMF_2928 PF00571 CBS domain BAMF_2929 PF04298 Putative neutral zinc metallopeptidase BAMF_2931 PF11458 Membrane-integrating protein Mistic BAMF_2932 PF07885 Ion channel BAMF_2932 PF02254 TrkA-N domain BAMF_2933 PF08868 YugN-like family BAMF_2935 PF00342 Phosphoglucose isomerase BAMF_2936 PF00465 Iron-containing alcohol dehydrogenase BAMF_2937 PF00465 Iron-containing alcohol dehydrogenase BAMF_2938 PF04070 Domain of unknown function (DUF378) BAMF_2939 PF00575 S1 RNA binding domain BAMF_2940 PF00155 Aminotransferase class I and II BAMF_2941 PF01037 Lrp/AsnC ligand binding domain BAMF_2942 PF08386 TAP-like protein BAMF_2942 PF00561 alpha/beta hydrolase fold BAMF_2943 PF08958 Domain of unknown function (DUF1871) BAMF_2944 PF00155 Aminotransferase class I and II BAMF_2945 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BAMF_2945 PF00512 His Kinase A (phospho-acceptor) domain BAMF_2946 PF08810 Kinase associated protein B BAMF_2947 PF00929 Exonuclease BAMF_2948 PF07690 Major Facilitator Superfamily BAMF_2949 PF00912 Transglycosylase BAMF_2949 PF00905 Penicillin binding protein transpeptidase domain BAMF_2950 PF04134 Protein of unknown function, DUF393 BAMF_2951 PF17328 Family of unknown function (DUF5366) BAMF_2952 PF14689 Sensor_kinase_SpoOB-type, alpha-helical domain BAMF_2952 PF00989 PAS fold BAMF_2952 PF17203 Single cache domain 3 BAMF_2952 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BAMF_2953 PF00072 Response regulator receiver domain BAMF_2959 PF13244 Domain of unknown function (DUF4040) BAMF_2959 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus BAMF_2959 PF00361 Proton-conducting membrane transporter BAMF_2960 PF04039 Domain related to MnhB subunit of Na+/H+ antiporter BAMF_2961 PF00420 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L BAMF_2962 PF00361 Proton-conducting membrane transporter BAMF_2963 PF01899 Na+/H+ ion antiporter subunit BAMF_2964 PF04066 Multiple resistance and pH regulation protein F (MrpF / PhaF) BAMF_2965 PF03334 Na+/H+ antiporter subunit BAMF_2966 PF03061 Thioesterase superfamily BAMF_2967 PF00072 Response regulator receiver domain BAMF_2967 PF00196 Bacterial regulatory proteins, luxR family BAMF_2968 PF07730 Histidine kinase BAMF_2968 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BAMF_2970 PF00348 Polyprenyl synthetase BAMF_2971 PF08181 DegQ (SacQ) family BAMF_2973 PF08668 HDOD domain BAMF_2973 PF00563 EAL domain BAMF_2974 PF04095 Nicotinate phosphoribosyltransferase (NAPRTase) family BAMF_2974 PF17956 Nicotinate phosphoribosyltransferase C-terminal domain BAMF_2974 PF17767 Nicotinate phosphoribosyltransferase (NAPRTase) N-terminal domain BAMF_2975 PF00857 Isochorismatase family BAMF_2976 PF07997 Protein of unknown function (DUF1694) BAMF_2977 PF14166 YueH-like protein BAMF_2978 PF10676 Spore germination protein gerPA/gerPF BAMF_2979 PF01594 AI-2E family transporter BAMF_2980 PF01966 HD domain BAMF_2981 PF00106 short chain dehydrogenase BAMF_2982 PF17355 Family of unknown function (DUF5383) BAMF_2984 PF01580 FtsK/SpoIIIE family BAMF_2984 PF12538 DNA transporter BAMF_2985 PF10140 WXG100 protein secretion system (Wss), protein YukC BAMF_2986 PF08817 WXG100 protein secretion system (Wss), protein YukD BAMF_2987 PF06013 Proteins of 100 residues with WXG BAMF_2988 PF06018 CodY GAF-like domain BAMF_2988 PF13556 PucR C-terminal helix-turn-helix domain BAMF_2988 PF17853 GGDEF-like domain BAMF_2989 PF01262 Alanine dehydrogenase/PNT, C-terminal domain BAMF_2989 PF05222 Alanine dehydrogenase/PNT, N-terminal domain BAMF_2990 PF10042 Uncharacterized conserved protein (DUF2278) BAMF_2991 PF03621 MbtH-like protein BAMF_2992 PF13193 AMP-binding enzyme C-terminal domain BAMF_2992 PF00550 Phosphopantetheine attachment site BAMF_2992 PF00501 AMP-binding enzyme BAMF_2992 PF00975 Thioesterase domain BAMF_2992 PF00668 Condensation domain BAMF_2993 PF00550 Phosphopantetheine attachment site BAMF_2993 PF00857 Isochorismatase family BAMF_2994 PF00501 AMP-binding enzyme BAMF_2994 PF13193 AMP-binding enzyme C-terminal domain BAMF_2995 PF00425 chorismate binding enzyme BAMF_2996 PF00106 short chain dehydrogenase BAMF_2997 PF00756 Putative esterase BAMF_2998 PF00174 Oxidoreductase molybdopterin binding domain BAMF_2999 PF02632 BioY family BAMF_3000 PF13726 Na+-H+ antiporter family BAMF_3000 PF03553 Na+/H+ antiporter family BAMF_3001 PF00883 Cytosol aminopeptidase family, catalytic domain BAMF_3001 PF02789 Cytosol aminopeptidase family, N-terminal domain BAMF_3002 PF02681 Divergent PAP2 family BAMF_3003 PF06725 3D domain BAMF_3004 PF14068 Putative membrane protein BAMF_3005 PF17302 Family of unknown function (DUF5351) BAMF_3006 PF07992 Pyridine nucleotide-disulphide oxidoreductase BAMF_3007 PF07992 Pyridine nucleotide-disulphide oxidoreductase BAMF_3009 PF00478 IMP dehydrogenase / GMP reductase domain BAMF_3012 PF00005 ABC transporter BAMF_3016 PF13302 Acetyltransferase (GNAT) domain BAMF_3017 PF13302 Acetyltransferase (GNAT) domain BAMF_3018 PF00106 short chain dehydrogenase BAMF_3019 PF01521 Iron-sulphur cluster biosynthesis BAMF_3020 PF01678 Diaminopimelate epimerase BAMF_3021 PF07662 Na+ dependent nucleoside transporter C-terminus BAMF_3021 PF01773 Na+ dependent nucleoside transporter N-terminus BAMF_3022 PF07293 Protein of unknown function (DUF1450) BAMF_3023 PF07992 Pyridine nucleotide-disulphide oxidoreductase BAMF_3024 PF07315 Protein of unknown function (DUF1462) BAMF_3025 PF01106 NifU-like domain BAMF_3026 PF00326 Prolyl oligopeptidase family BAMF_3026 PF07676 WD40-like Beta Propeller Repeat BAMF_3027 PF07676 WD40-like Beta Propeller Repeat BAMF_3027 PF00326 Prolyl oligopeptidase family BAMF_3028 PF00288 GHMP kinases N terminal domain BAMF_3028 PF08544 GHMP kinases C terminal BAMF_3029 PF00291 Pyridoxal-phosphate dependent enzyme BAMF_3030 PF00742 Homoserine dehydrogenase BAMF_3030 PF01842 ACT domain BAMF_3030 PF03447 Homoserine dehydrogenase, NAD binding domain BAMF_3032 PF04608 Phosphatidylglycerophosphatase A BAMF_3033 PF13344 Haloacid dehalogenase-like hydrolase BAMF_3034 PF01934 Protein of unknown function DUF86 BAMF_3035 PF06265 Protein of unknown function (DUF1027) BAMF_3036 PF04055 Radical SAM superfamily BAMF_3036 PF16881 N-terminal domain of lipoyl synthase of Radical_SAM family BAMF_3037 PF01551 Peptidase family M23 BAMF_3038 PF09560 Sporulation protein YunB (Spo_YunB) BAMF_3039 PF02872 5'-nucleotidase, C-terminal domain BAMF_3040 PF01925 Sulfite exporter TauE/SafE BAMF_3041 PF01904 Protein of unknown function DUF72 BAMF_3043 PF01979 Amidohydrolase family BAMF_3044 PF07905 Purine catabolism regulatory protein-like family BAMF_3044 PF13556 PucR C-terminal helix-turn-helix domain BAMF_3044 PF17853 GGDEF-like domain BAMF_3046 PF07690 Major Facilitator Superfamily BAMF_3047 PF00266 Aminotransferase class-V BAMF_3048 PF01546 Peptidase family M20/M25/M40 BAMF_3049 PF04231 Endonuclease I BAMF_3050 PF17912 MalK OB fold domain BAMF_3050 PF03459 TOBE domain BAMF_3050 PF00005 ABC transporter BAMF_3051 PF07702 UTRA domain BAMF_3051 PF00392 Bacterial regulatory proteins, gntR family BAMF_3052 PF00294 pfkB family carbohydrate kinase BAMF_3053 PF00528 Binding-protein-dependent transport system inner membrane component BAMF_3054 PF00528 Binding-protein-dependent transport system inner membrane component BAMF_3055 PF01547 Bacterial extracellular solute-binding protein BAMF_3056 PF01380 SIS domain BAMF_3057 PF13411 MerR HTH family regulatory protein BAMF_3060 PF17418 Sporulation delaying protein SdpA BAMF_3061 PF07853 Protein of unknown function (DUF1648) BAMF_3062 PF01541 GIY-YIG catalytic domain BAMF_3063 PF01266 FAD dependent oxidoreductase BAMF_3064 PF01209 ubiE/COQ5 methyltransferase family BAMF_3065 PF10903 Protein of unknown function (DUF2691) BAMF_3066 PF01374 Glycosyl hydrolase family 46 BAMF_3069 PF01510 N-acetylmuramoyl-L-alanine amidase BAMF_3069 PF01476 LysM domain BAMF_3069 PF01471 Putative peptidoglycan binding domain BAMF_3070 PF05105 Bacteriophage holin family BAMF_3074 PF11962 Peptidase_G2, IMC autoproteolytic cleavage domain BAMF_3074 PF12708 Pectate lyase superfamily protein BAMF_3075 PF13457 GW (Gly-Tryp) dipeptide domain BAMF_3075 PF01832 Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase BAMF_3077 PF01464 Transglycosylase SLT domain BAMF_3095 PF01612 3'-5' exonuclease BAMF_3095 PF00476 DNA polymerase family A BAMF_3095 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain BAMF_3095 PF01367 5'-3' exonuclease, C-terminal SAM fold BAMF_3104 PF01381 Helix-turn-helix BAMF_3105 PF00589 Phage integrase family BAMF_3105 PF02899 Phage integrase, N-terminal SAM-like domain BAMF_3106 PF01458 Uncharacterized protein family (UPF0051) BAMF_3107 PF01592 NifU-like N terminal domain BAMF_3108 PF00266 Aminotransferase class-V BAMF_3109 PF01458 Uncharacterized protein family (UPF0051) BAMF_3110 PF00005 ABC transporter BAMF_3112 PF02627 Carboxymuconolactone decarboxylase family BAMF_3113 PF03180 NLPA lipoprotein BAMF_3114 PF00528 Binding-protein-dependent transport system inner membrane component BAMF_3115 PF00005 ABC transporter BAMF_3115 PF09383 NIL domain BAMF_3116 PF02036 SCP-2 sterol transfer family BAMF_3117 PF00085 Thioredoxin BAMF_3118 PF01751 Toprim domain BAMF_3119 PF10830 Protein of unknown function (DUF2553) BAMF_3120 PF01597 Glycine cleavage H-protein BAMF_3121 PF03960 ArsC family BAMF_3122 PF00441 Acyl-CoA dehydrogenase, C-terminal domain BAMF_3122 PF02770 Acyl-CoA dehydrogenase, middle domain BAMF_3122 PF02771 Acyl-CoA dehydrogenase, N-terminal domain BAMF_3123 PF00108 Thiolase, N-terminal domain BAMF_3123 PF02803 Thiolase, C-terminal domain BAMF_3124 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain BAMF_3124 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain BAMF_3124 PF00378 Enoyl-CoA hydratase/isomerase BAMF_3125 PF14115 YuzL-like protein BAMF_3126 PF01619 Proline dehydrogenase BAMF_3128 PF07875 Coat F domain BAMF_3129 PF01047 MarR family BAMF_3130 PF07690 Major Facilitator Superfamily BAMF_3131 PF02923 Restriction endonuclease BamHI BAMF_3132 PF01555 DNA methylase BAMF_3133 PF10835 Protein of unknown function (DUF2573) BAMF_3134 PF00005 ABC transporter BAMF_3135 PF14039 YusW-like protein BAMF_3137 PF00106 short chain dehydrogenase BAMF_3138 PF00210 Ferritin-like domain BAMF_3139 PF13180 PDZ domain BAMF_3140 PF00486 Transcriptional regulatory protein, C terminal BAMF_3140 PF00072 Response regulator receiver domain BAMF_3141 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BAMF_3141 PF00672 HAMP domain BAMF_3141 PF00512 His Kinase A (phospho-acceptor) domain BAMF_3143 PF00440 Bacterial regulatory proteins, tetR family BAMF_3144 PF10415 Fumarase C C-terminus BAMF_3144 PF00206 Lyase BAMF_3145 PF13113 Protein of unknown function (DUF3970) BAMF_3146 PF03323 Bacillus/Clostridium GerA spore germination protein BAMF_3147 PF03845 Spore germination protein BAMF_3148 PF05504 Spore germination B3/ GerAC like, C-terminal BAMF_3149 PF00196 Bacterial regulatory proteins, luxR family BAMF_3149 PF00072 Response regulator receiver domain BAMF_3150 PF07730 Histidine kinase BAMF_3150 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BAMF_3150 PF00672 HAMP domain BAMF_3151 PF09922 Cell wall-active antibiotics response 4TMS YvqF BAMF_3152 PF13349 Putative adhesin BAMF_3153 PF04012 PspA/IM30 family BAMF_3155 PF07690 Major Facilitator Superfamily BAMF_3156 PF01923 Cobalamin adenosyltransferase BAMF_3157 PF00005 ABC transporter BAMF_3158 PF01032 FecCD transport family BAMF_3159 PF01497 Periplasmic binding protein BAMF_3160 PF00106 short chain dehydrogenase BAMF_3161 PF08450 SMP-30/Gluconolactonase/LRE-like region BAMF_3162 PF00512 His Kinase A (phospho-acceptor) domain BAMF_3162 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BAMF_3163 PF00486 Transcriptional regulatory protein, C terminal BAMF_3163 PF00072 Response regulator receiver domain BAMF_3165 PF04545 Sigma-70, region 4 BAMF_3166 PF12841 YvrJ protein family BAMF_3167 PF00190 Cupin BAMF_3168 PF14184 Regulatory protein YrvL BAMF_3169 PF00005 ABC transporter BAMF_3170 PF01032 FecCD transport family BAMF_3171 PF01032 FecCD transport family BAMF_3172 PF01497 Periplasmic binding protein BAMF_3173 PF04072 Leucine carboxyl methyltransferase BAMF_3174 PF13520 Amino acid permease BAMF_3175 PF09575 Small spore protein J (Spore_SspJ) BAMF_3176 PF04307 LexA-binding, inner membrane-associated putative hydrolase BAMF_3177 PF00884 Sulfatase BAMF_3178 PF00884 Sulfatase BAMF_3179 PF12727 PBP superfamily domain BAMF_3179 PF12728 Helix-turn-helix domain BAMF_3181 PF00528 Binding-protein-dependent transport system inner membrane component BAMF_3182 PF00072 Response regulator receiver domain BAMF_3182 PF00196 Bacterial regulatory proteins, luxR family BAMF_3184 PF00005 ABC transporter BAMF_3187 PF00248 Aldo/keto reductase family BAMF_3189 PF00999 Sodium/hydrogen exchanger family BAMF_3190 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain BAMF_3190 PF01077 Nitrite and sulphite reductase 4Fe-4S domain BAMF_3191 PF00667 FAD binding domain BAMF_3191 PF00175 Oxidoreductase NAD-binding domain BAMF_3191 PF00258 Flavodoxin BAMF_3192 PF13538 UvrD-like helicase C-terminal domain BAMF_3193 PF03458 UPF0126 domain BAMF_3195 PF02600 Disulfide bond formation protein DsbB BAMF_3196 PF13462 Thioredoxin BAMF_3197 PF00403 Heavy-metal-associated domain BAMF_3198 PF00403 Heavy-metal-associated domain BAMF_3199 PF00403 Heavy-metal-associated domain BAMF_3200 PF02583 Metal-sensitive transcriptional repressor BAMF_3201 PF01408 Oxidoreductase family, NAD-binding Rossmann fold BAMF_3201 PF02894 Oxidoreductase family, C-terminal alpha/beta domain BAMF_3202 PF02525 Flavodoxin-like fold BAMF_3203 PF00296 Luciferase-like monooxygenase BAMF_3204 PF00462 Glutaredoxin BAMF_3205 PF00296 Luciferase-like monooxygenase BAMF_3206 PF00005 ABC transporter BAMF_3207 PF00528 Binding-protein-dependent transport system inner membrane component BAMF_3208 PF00528 Binding-protein-dependent transport system inner membrane component BAMF_3209 PF00497 Bacterial extracellular solute-binding proteins, family 3 BAMF_3210 PF00497 Bacterial extracellular solute-binding proteins, family 3 BAMF_3211 PF00583 Acetyltransferase (GNAT) family BAMF_3212 PF03466 LysR substrate binding domain BAMF_3212 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family BAMF_3213 PF00106 short chain dehydrogenase BAMF_3214 PF01337 Barstar (barnase inhibitor) BAMF_3215 PF01668 SmpB protein BAMF_3216 PF00773 RNB domain BAMF_3216 PF08206 Ribonuclease B OB domain BAMF_3216 PF00575 S1 RNA binding domain BAMF_3216 PF17876 Cold shock domain BAMF_3217 PF12146 Serine aminopeptidase, S33 BAMF_3218 PF03840 Preprotein translocase SecG subunit BAMF_3219 PF01381 Helix-turn-helix BAMF_3222 PF01638 HxlR-like helix-turn-helix BAMF_3223 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BAMF_3223 PF00512 His Kinase A (phospho-acceptor) domain BAMF_3224 PF00072 Response regulator receiver domain BAMF_3224 PF00486 Transcriptional regulatory protein, C terminal BAMF_3227 PF00005 ABC transporter BAMF_3228 PF00528 Binding-protein-dependent transport system inner membrane component BAMF_3229 PF04069 Substrate binding domain of ABC-type glycine betaine transport system BAMF_3230 PF00528 Binding-protein-dependent transport system inner membrane component BAMF_3231 PF00005 ABC transporter BAMF_3231 PF00571 CBS domain BAMF_3232 PF12802 MarR family BAMF_3233 PF00528 Binding-protein-dependent transport system inner membrane component BAMF_3234 PF04069 Substrate binding domain of ABC-type glycine betaine transport system BAMF_3235 PF00528 Binding-protein-dependent transport system inner membrane component BAMF_3236 PF00005 ABC transporter BAMF_3236 PF00571 CBS domain BAMF_3237 PF12802 MarR family BAMF_3238 PF01914 MarC family integral membrane protein BAMF_3240 PF13240 zinc-ribbon domain BAMF_3241 PF00583 Acetyltransferase (GNAT) family BAMF_3244 PF02585 GlcNAc-PI de-N-acetylase BAMF_3247 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family BAMF_3248 PF01370 NAD dependent epimerase/dehydratase family BAMF_3249 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family BAMF_3250 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain BAMF_3250 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain BAMF_3250 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain BAMF_3251 PF02225 PA domain BAMF_3251 PF04389 Peptidase family M28 BAMF_3252 PF03952 Enolase, N-terminal domain BAMF_3252 PF00113 Enolase, C-terminal TIM barrel domain BAMF_3253 PF06415 BPG-independent PGAM N-terminus (iPGM_N) BAMF_3253 PF01676 Metalloenzyme superfamily BAMF_3254 PF00121 Triosephosphate isomerase BAMF_3255 PF00162 Phosphoglycerate kinase BAMF_3256 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain BAMF_3256 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain BAMF_3257 PF04198 Putative sugar-binding domain BAMF_3258 PF00083 Sugar (and other) transporter BAMF_3259 PF00392 Bacterial regulatory proteins, gntR family BAMF_3260 PF00296 Luciferase-like monooxygenase BAMF_3261 PF03466 LysR substrate binding domain BAMF_3261 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family BAMF_3262 PF00892 EamA-like transporter family BAMF_3263 PF00324 Amino acid permease BAMF_3264 PF01380 SIS domain BAMF_3264 PF01418 Helix-turn-helix domain, rpiR family BAMF_3265 PF02782 FGGY family of carbohydrate kinases, C-terminal domain BAMF_3265 PF00370 FGGY family of carbohydrate kinases, N-terminal domain BAMF_3266 PF02447 GntP family permease BAMF_3267 PF02589 LUD domain BAMF_3268 PF13183 4Fe-4S dicluster domain BAMF_3268 PF11870 Domain of unknown function (DUF3390) BAMF_3268 PF02589 LUD domain BAMF_3269 PF02754 Cysteine-rich domain BAMF_3270 PF00155 Aminotransferase class I and II BAMF_3271 PF07729 FCD domain BAMF_3271 PF00392 Bacterial regulatory proteins, gntR family BAMF_3272 PF02652 L-lactate permease BAMF_3273 PF00309 Sigma-54 factor, Activator interacting domain (AID) BAMF_3273 PF04552 Sigma-54, DNA binding domain BAMF_3273 PF04963 Sigma-54 factor, core binding domain BAMF_3274 PF09628 YvfG protein BAMF_3275 PF04230 Polysaccharide pyruvyl transferase BAMF_3276 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family BAMF_3277 PF17836 PglD N-terminal domain BAMF_3277 PF00132 Bacterial transferase hexapeptide (six repeats) BAMF_3278 PF02397 Bacterial sugar transferase BAMF_3279 PF01943 Polysaccharide biosynthesis protein BAMF_3279 PF14667 Polysaccharide biosynthesis C-terminal domain BAMF_3280 PF00535 Glycosyl transferase family 2 BAMF_3281 PF04230 Polysaccharide pyruvyl transferase BAMF_3282 PF00535 Glycosyl transferase family 2 BAMF_3284 PF13439 Glycosyltransferase Family 4 BAMF_3284 PF00534 Glycosyl transferases group 1 BAMF_3285 PF00535 Glycosyl transferase family 2 BAMF_3286 PF00534 Glycosyl transferases group 1 BAMF_3286 PF13439 Glycosyltransferase Family 4 BAMF_3287 PF02719 Polysaccharide biosynthesis protein BAMF_3288 PF13614 AAA domain BAMF_3289 PF02706 Chain length determinant protein BAMF_3290 PF01381 Helix-turn-helix BAMF_3290 PF08671 Anti-repressor SinI BAMF_3291 PF00135 Carboxylesterase family BAMF_3293 PF01872 RibD C-terminal domain BAMF_3294 PF01494 FAD binding domain BAMF_3297 PF00583 Acetyltransferase (GNAT) family BAMF_3298 PF05870 Phenolic acid decarboxylase (PAD) BAMF_3305 PF08244 Glycosyl hydrolases family 32 C terminal BAMF_3305 PF00251 Glycosyl hydrolases family 32 N-terminal domain BAMF_3306 PF01306 LacY proton/sugar symporter BAMF_3307 PF00356 Bacterial regulatory proteins, lacI family BAMF_3308 PF00574 Clp protease BAMF_3309 PF03466 LysR substrate binding domain BAMF_3309 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family BAMF_3310 PF04303 PrpF protein BAMF_3311 PF00083 Sugar (and other) transporter BAMF_3313 PF03641 Possible lysine decarboxylase BAMF_3314 PF03819 MazG nucleotide pyrophosphohydrolase domain BAMF_3315 PF00916 Sulfate permease family BAMF_3315 PF01740 STAS domain BAMF_3316 PF00484 Carbonic anhydrase BAMF_3318 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain BAMF_3318 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain BAMF_3319 PF00545 ribonuclease BAMF_3320 PF00797 N-acetyltransferase BAMF_3321 PF00381 PTS HPr component phosphorylation site BAMF_3322 PF14527 WhiA LAGLIDADG-like domain BAMF_3322 PF02650 WhiA C-terminal HTH domain BAMF_3322 PF10298 WhiA N-terminal LAGLIDADG-like domain BAMF_3323 PF01933 Uncharacterised protein family UPF0052 BAMF_3324 PF03668 P-loop ATPase protein family BAMF_3325 PF00293 NUDIX domain BAMF_3326 PF07992 Pyridine nucleotide-disulphide oxidoreductase BAMF_3327 PF00877 NlpC/P60 family BAMF_3329 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BAMF_3329 PF18698 Histidine kinase sensor domain BAMF_3329 PF00512 His Kinase A (phospho-acceptor) domain BAMF_3329 PF00672 HAMP domain BAMF_3329 PF00989 PAS fold BAMF_3330 PF00072 Response regulator receiver domain BAMF_3330 PF00486 Transcriptional regulatory protein, C terminal BAMF_3331 PF00005 ABC transporter BAMF_3331 PF00664 ABC transporter transmembrane region BAMF_3332 PF01502 Phosphoribosyl-AMP cyclohydrolase BAMF_3332 PF01503 Phosphoribosyl-ATP pyrophosphohydrolase BAMF_3333 PF00977 Histidine biosynthesis protein BAMF_3334 PF00977 Histidine biosynthesis protein BAMF_3335 PF00117 Glutamine amidotransferase class-I BAMF_3336 PF00475 Imidazoleglycerol-phosphate dehydratase BAMF_3337 PF00815 Histidinol dehydrogenase BAMF_3338 PF01634 ATP phosphoribosyltransferase BAMF_3339 PF13393 Histidyl-tRNA synthetase BAMF_3340 PF13529 Peptidase_C39 like family BAMF_3341 PF14602 Hexapeptide repeat of succinyl-transferase BAMF_3342 PF13419 Haloacid dehalogenase-like hydrolase BAMF_3343 PF01790 Prolipoprotein diacylglyceryl transferase BAMF_3344 PF07475 HPr Serine kinase C-terminal domain BAMF_3344 PF02603 HPr Serine kinase N terminus BAMF_3345 PF01979 Amidohydrolase family BAMF_3346 PF01182 Glucosamine-6-phosphate isomerases/6-phosphogluconolactonase BAMF_3348 PF00440 Bacterial regulatory proteins, tetR family BAMF_3349 PF00149 Calcineurin-like phosphoesterase BAMF_3350 PF04020 Mycobacterial 4 TMS phage holin, superfamily IV BAMF_3351 PF04024 PspC domain BAMF_3352 PF13349 Putative adhesin BAMF_3355 PF17760 UvrA interaction domain BAMF_3355 PF17755 UvrA DNA-binding domain BAMF_3355 PF00005 ABC transporter BAMF_3356 PF02151 UvrB/uvrC motif BAMF_3356 PF04851 Type III restriction enzyme, res subunit BAMF_3356 PF17757 UvrB interaction domain BAMF_3356 PF12344 Ultra-violet resistance protein B BAMF_3356 PF00271 Helicase conserved C-terminal domain BAMF_3357 PF09964 Uncharacterized protein conserved in bacteria (DUF2198) BAMF_3358 PF01326 Pyruvate phosphate dikinase, PEP/pyruvate binding domain BAMF_3358 PF00391 PEP-utilising enzyme, mobile domain BAMF_3359 PF00440 Bacterial regulatory proteins, tetR family BAMF_3360 PF07690 Major Facilitator Superfamily BAMF_3362 PF17820 PDZ domain BAMF_3363 PF17423 Swarming motility protein BAMF_3364 PF01471 Putative peptidoglycan binding domain BAMF_3364 PF03572 Peptidase family S41 BAMF_3364 PF17820 PDZ domain BAMF_3365 PF13229 Right handed beta helix region BAMF_3366 PF18075 FtsX extracellular domain BAMF_3366 PF02687 FtsX-like permease family BAMF_3367 PF00005 ABC transporter BAMF_3368 PF13442 Cytochrome C oxidase, cbb3-type, subunit III BAMF_3369 PF02588 Uncharacterised 5xTM membrane BCR, YitT family COG1284 BAMF_3369 PF10035 Uncharacterized protein conserved in bacteria (DUF2179) BAMF_3370 PF03462 PCRF domain BAMF_3370 PF00472 RF-1 domain BAMF_3371 PF01043 SecA preprotein cross-linking domain BAMF_3371 PF07517 SecA DEAD-like domain BAMF_3371 PF02810 SEC-C motif BAMF_3371 PF07516 SecA Wing and Scaffold domain BAMF_3372 PF02482 Sigma 54 modulation protein / S30EA ribosomal protein BAMF_3372 PF16321 Sigma 54 modulation/S30EA ribosomal protein C terminus BAMF_3375 PF02561 Flagellar protein FliS BAMF_3376 PF07195 Flagellar hook-associated protein 2 C-terminus BAMF_3376 PF02465 Flagellar hook-associated protein 2 N-terminus BAMF_3376 PF07196 Flagellin hook IN motif BAMF_3377 PF00700 Bacterial flagellin C-terminal helical region BAMF_3377 PF00669 Bacterial flagellin N-terminal helical region BAMF_3378 PF02599 Global regulator protein family BAMF_3379 PF02623 FliW protein BAMF_3381 PF00700 Bacterial flagellin C-terminal helical region BAMF_3381 PF00669 Bacterial flagellin N-terminal helical region BAMF_3382 PF06429 Flagellar basal body rod FlgEFG protein C-terminal BAMF_3382 PF00460 Flagella basal body rod protein BAMF_3383 PF05130 FlgN protein BAMF_3384 PF04316 Anti-sigma-28 factor, FlgM BAMF_3387 PF10719 Late competence development protein ComFB BAMF_3388 PF00271 Helicase conserved C-terminal domain BAMF_3388 PF04851 Type III restriction enzyme, res subunit BAMF_3389 PF02645 Uncharacterised protein, DegV family COG1307 BAMF_3390 PF00072 Response regulator receiver domain BAMF_3390 PF00196 Bacterial regulatory proteins, luxR family BAMF_3391 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BAMF_3391 PF07730 Histidine kinase BAMF_3391 PF05384 Sensor protein DegS BAMF_3392 PF09186 Domain of unknown function (DUF1949) BAMF_3392 PF01205 Uncharacterized protein family UPF0029 BAMF_3393 PF03816 Cell envelope-related transcriptional attenuator domain BAMF_3394 PF00953 Glycosyl transferase family 4 BAMF_3396 PF00535 Glycosyl transferase family 2 BAMF_3397 PF02706 Chain length determinant protein BAMF_3398 PF04932 O-Antigen ligase BAMF_3399 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain BAMF_3399 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain BAMF_3399 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain BAMF_3400 PF00534 Glycosyl transferases group 1 BAMF_3400 PF13439 Glycosyltransferase Family 4 BAMF_3401 PF01943 Polysaccharide biosynthesis protein BAMF_3401 PF14667 Polysaccharide biosynthesis C-terminal domain BAMF_3402 PF02397 Bacterial sugar transferase BAMF_3403 PF04122 Putative cell wall binding repeat 2 BAMF_3403 PF01520 N-acetylmuramoyl-L-alanine amidase BAMF_3404 PF04122 Putative cell wall binding repeat 2 BAMF_3404 PF08486 Stage II sporulation protein BAMF_3406 PF03816 Cell envelope-related transcriptional attenuator domain BAMF_3407 PF02350 UDP-N-acetylglucosamine 2-epimerase BAMF_3408 PF00483 Nucleotidyl transferase BAMF_3409 PF00005 ABC transporter BAMF_3410 PF01061 ABC-2 type transporter BAMF_3411 PF04464 CDP-Glycerol:Poly(glycerophosphate) glycerophosphotransferase BAMF_3412 PF00534 Glycosyl transferases group 1 BAMF_3412 PF09318 Glycosyl transferase 1 domain A BAMF_3413 PF01467 Cytidylyltransferase-like BAMF_3414 PF03808 Glycosyl transferase WecB/TagA/CpsF family BAMF_3415 PF04464 CDP-Glycerol:Poly(glycerophosphate) glycerophosphotransferase BAMF_3416 PF01832 Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase BAMF_3416 PF08239 Bacterial SH3 domain BAMF_3416 PF05036 Sporulation related domain BAMF_3417 PF01238 Phosphomannose isomerase type I BAMF_3418 PF03323 Bacillus/Clostridium GerA spore germination protein BAMF_3419 PF03845 Spore germination protein BAMF_3420 PF05504 Spore germination B3/ GerAC like, C-terminal BAMF_3421 PF00535 Glycosyl transferase family 2 BAMF_3422 PF00083 Sugar (and other) transporter BAMF_3423 PF03816 Cell envelope-related transcriptional attenuator domain BAMF_3425 PF04791 LMBR1-like membrane protein BAMF_3426 PF00877 NlpC/P60 family BAMF_3428 PF09587 Bacterial capsule synthesis protein PGA_cap BAMF_3429 PF14102 Capsule biosynthesis CapC BAMF_3430 PF08245 Mur ligase middle domain BAMF_3432 PF03323 Bacillus/Clostridium GerA spore germination protein BAMF_3433 PF03845 Spore germination protein BAMF_3436 PF00356 Bacterial regulatory proteins, lacI family BAMF_3437 PF00294 pfkB family carbohydrate kinase BAMF_3438 PF05025 RbsD / FucU transport protein family BAMF_3439 PF00005 ABC transporter BAMF_3440 PF02653 Branched-chain amino acid transport system / permease component BAMF_3441 PF13407 Periplasmic binding protein domain BAMF_3442 PF08239 Bacterial SH3 domain BAMF_3443 PF02525 Flavodoxin-like fold BAMF_3444 PF03306 Alpha-acetolactate decarboxylase BAMF_3445 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain BAMF_3445 PF00205 Thiamine pyrophosphate enzyme, central domain BAMF_3445 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain BAMF_3446 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family BAMF_3446 PF03466 LysR substrate binding domain BAMF_3447 PF02040 Arsenical pump membrane protein BAMF_3450 PF08757 CotH kinase protein BAMF_3452 PF01613 Flavin reductase like domain BAMF_3455 PF13404 AsnC-type helix-turn-helix domain BAMF_3455 PF01037 Lrp/AsnC ligand binding domain BAMF_3456 PF02417 Chromate transporter BAMF_3457 PF02417 Chromate transporter BAMF_3463 PF14431 YwqJ-like deaminase BAMF_3463 PF14449 Pre-toxin TG BAMF_3463 PF04740 LXG domain of WXG superfamily BAMF_3465 PF16888 Domain of unknown function (DUF5082) BAMF_3466 PF09234 Domain of unknown function (DUF1963) BAMF_3467 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain BAMF_3467 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain BAMF_3467 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain BAMF_3469 PF13614 AAA domain BAMF_3470 PF02706 Chain length determinant protein BAMF_3470 PF13807 G-rich domain on putative tyrosine kinase BAMF_3472 PF04434 SWIM zinc finger BAMF_3473 PF00271 Helicase conserved C-terminal domain BAMF_3473 PF12419 SNF2 Helicase protein BAMF_3473 PF00176 SNF2 family N-terminal domain BAMF_3475 PF08220 DeoR-like helix-turn-helix domain BAMF_3475 PF00455 DeoR C terminal sensor domain BAMF_3476 PF00436 Single-strand binding protein family BAMF_3478 PF14183 YwpF-like protein BAMF_3479 PF01741 Large-conductance mechanosensitive channel, MscL BAMF_3480 PF07977 FabA-like domain BAMF_3481 PF18801 response regulator aspartate phosphatase H, N terminal BAMF_3482 PF00460 Flagella basal body rod protein BAMF_3482 PF06429 Flagellar basal body rod FlgEFG protein C-terminal BAMF_3483 PF00460 Flagella basal body rod protein BAMF_3483 PF06429 Flagellar basal body rod FlgEFG protein C-terminal BAMF_3485 PF12116 Stage III sporulation protein D BAMF_3486 PF01047 MarR family BAMF_3487 PF07690 Major Facilitator Superfamily BAMF_3488 PF02133 Permease for cytosine/purines, uracil, thiamine, allantoin BAMF_3489 PF07690 Major Facilitator Superfamily BAMF_3490 PF00857 Isochorismatase family BAMF_3491 PF00909 Ammonium Transporter Family BAMF_3492 PF00543 Nitrogen regulatory protein P-II BAMF_3493 PF01098 Cell cycle protein BAMF_3494 PF01569 PAP2 superfamily BAMF_3495 PF04892 VanZ like family BAMF_3496 PF01551 Peptidase family M23 BAMF_3497 PF00583 Acetyltransferase (GNAT) family BAMF_3498 PF17319 Family of unknown function (DUF5362) BAMF_3499 PF17370 Family of unknown function (DUF5392) BAMF_3500 PF13396 Phospholipase_D-nuclease N-terminal BAMF_3500 PF13091 PLD-like domain BAMF_3501 PF17319 Family of unknown function (DUF5362) BAMF_3502 PF13460 NAD(P)H-binding BAMF_3503 PF02082 Transcriptional regulator BAMF_3504 PF00449 Urease alpha-subunit, N-terminal domain BAMF_3504 PF01979 Amidohydrolase family BAMF_3505 PF00699 Urease beta subunit BAMF_3506 PF00547 Urease, gamma subunit BAMF_3507 PF05532 CsbD-like BAMF_3508 PF04055 Radical SAM superfamily BAMF_3508 PF06463 Molybdenum Cofactor Synthesis C BAMF_3509 PF02634 FdhD/NarQ family BAMF_3510 PF00092 von Willebrand factor type A domain BAMF_3511 PF00092 von Willebrand factor type A domain BAMF_3512 PF08486 Stage II sporulation protein BAMF_3513 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) BAMF_3514 PF08680 TATA-box binding BAMF_3515 PF06612 Protein of unknown function (DUF1146) BAMF_3517 PF00401 ATP synthase, Delta/Epsilon chain, long alpha-helix domain BAMF_3517 PF02823 ATP synthase, Delta/Epsilon chain, beta-sandwich domain BAMF_3518 PF02874 ATP synthase alpha/beta family, beta-barrel domain BAMF_3518 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain BAMF_3519 PF00231 ATP synthase BAMF_3520 PF02874 ATP synthase alpha/beta family, beta-barrel domain BAMF_3520 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain BAMF_3520 PF00306 ATP synthase alpha/beta chain, C terminal domain BAMF_3521 PF00213 ATP synthase delta (OSCP) subunit BAMF_3522 PF00430 ATP synthase B/B' CF(0) BAMF_3523 PF00137 ATP synthase subunit C BAMF_3524 PF00119 ATP synthase A chain BAMF_3525 PF03899 ATP synthase I chain BAMF_3527 PF00464 Serine hydroxymethyltransferase BAMF_3528 PF04260 Protein of unknown function (DUF436) BAMF_3529 PF02502 Ribose/Galactose Isomerase BAMF_3530 PF01451 Low molecular weight phosphotyrosine protein phosphatase BAMF_3531 PF02659 Putative manganese efflux pump BAMF_3532 PF01300 Telomere recombination BAMF_3532 PF03481 Putative GTP-binding controlling metal-binding BAMF_3534 PF09551 Stage II sporulation protein R (spore_II_R) BAMF_3535 PF17094 Uncharacterised protein family (UPF0715) BAMF_3536 PF17247 Family of unknown function (DUF5316) BAMF_3537 PF17827 PrmC N-terminal domain BAMF_3537 PF05175 Methyltransferase small domain BAMF_3538 PF00472 RF-1 domain BAMF_3538 PF03462 PCRF domain BAMF_3539 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily BAMF_3540 PF13411 MerR HTH family regulatory protein BAMF_3541 PF03547 Membrane transport protein BAMF_3542 PF00390 Malic enzyme, N-terminal domain BAMF_3542 PF03949 Malic enzyme, NAD binding domain BAMF_3543 PF00265 Thymidine kinase BAMF_3544 PF01197 Ribosomal protein L31 BAMF_3545 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain BAMF_3545 PF07498 Rho termination factor, N-terminal domain BAMF_3545 PF07497 Rho termination factor, RNA-binding domain BAMF_3546 PF03320 Bacterial fructose-1,6-bisphosphatase, glpX-encoded BAMF_3547 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) BAMF_3548 PF00923 Transaldolase/Fructose-6-phosphate aldolase BAMF_3549 PF01116 Fructose-bisphosphate aldolase class-II BAMF_3550 PF00072 Response regulator receiver domain BAMF_3551 PF10740 Domain of unknown function (DUF2529) BAMF_3552 PF06418 CTP synthase N-terminus BAMF_3552 PF00117 Glutamine amidotransferase class-I BAMF_3553 PF05066 HB1, ASXL, restriction endonuclease HTH domain BAMF_3554 PF02754 Cysteine-rich domain BAMF_3554 PF13183 4Fe-4S dicluster domain BAMF_3555 PF13091 PLD-like domain BAMF_3556 PF03851 UV-endonuclease UvdE BAMF_3558 PF00005 ABC transporter BAMF_3558 PF00664 ABC transporter transmembrane region BAMF_3559 PF13396 Phospholipase_D-nuclease N-terminal BAMF_3559 PF13091 PLD-like domain BAMF_3560 PF02665 Nitrate reductase gamma subunit BAMF_3561 PF02613 Nitrate reductase delta subunit BAMF_3562 PF13247 4Fe-4S dicluster domain BAMF_3562 PF14711 Respiratory nitrate reductase beta C-terminal BAMF_3563 PF00384 Molybdopterin oxidoreductase BAMF_3563 PF14710 Respiratory nitrate reductase alpha N-terminal BAMF_3563 PF01568 Molydopterin dinucleotide binding domain BAMF_3565 PF14256 YwiC-like protein BAMF_3566 PF00027 Cyclic nucleotide-binding domain BAMF_3566 PF00325 Bacterial regulatory proteins, crp family BAMF_3567 PF07690 Major Facilitator Superfamily BAMF_3568 PF00750 tRNA synthetases class I (R) BAMF_3568 PF05746 DALR anticodon binding domain BAMF_3568 PF03485 Arginyl tRNA synthetase N terminal domain BAMF_3569 PF09148 Domain of unknown function (DUF1934) BAMF_3573 PF18801 response regulator aspartate phosphatase H, N terminal BAMF_3574 PF00491 Arginase family BAMF_3575 PF17284 Spermidine synthase tetramerisation domain BAMF_3576 PF00912 Transglycosylase BAMF_3576 PF00905 Penicillin binding protein transpeptidase domain BAMF_3578 PF08741 YwhD family BAMF_3579 PF02163 Peptidase family M50 BAMF_3580 PF01361 Tautomerase enzyme BAMF_3581 PF01047 MarR family BAMF_3582 PF13520 Amino acid permease BAMF_3584 PF01966 HD domain BAMF_3585 PF07293 Protein of unknown function (DUF1450) BAMF_3587 PF03551 Transcriptional regulator PadR-like family BAMF_3589 PF00005 ABC transporter BAMF_3590 PF12679 ABC-2 family transporter protein BAMF_3595 PF03099 Biotin/lipoate A/B protein ligase family BAMF_3596 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family BAMF_3596 PF03466 LysR substrate binding domain BAMF_3597 PF03601 Conserved hypothetical protein 698 BAMF_3598 PF01515 Phosphate acetyl/butaryl transferase BAMF_3602 PF00155 Aminotransferase class I and II BAMF_3603 PF07690 Major Facilitator Superfamily BAMF_3606 PF07883 Cupin domain BAMF_3608 PF07690 Major Facilitator Superfamily BAMF_3609 PF07690 Major Facilitator Superfamily BAMF_3610 PF00324 Amino acid permease BAMF_3611 PF01546 Peptidase family M20/M25/M40 BAMF_3612 PF00171 Aldehyde dehydrogenase family BAMF_3614 PF00208 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase BAMF_3614 PF02812 Glu/Leu/Phe/Val dehydrogenase, dimerisation domain BAMF_3615 PF17735 Biofilm surface layer A BAMF_3616 PF00908 dTDP-4-dehydrorhamnose 3,5-epimerase BAMF_3617 PF04321 RmlD substrate binding domain BAMF_3618 PF16363 GDP-mannose 4,6 dehydratase BAMF_3619 PF00483 Nucleotidyl transferase BAMF_3620 PF04101 Glycosyltransferase family 28 C-terminal domain BAMF_3621 PF02348 Cytidylyltransferase BAMF_3622 PF03102 NeuB family BAMF_3622 PF08666 SAF domain BAMF_3623 PF00583 Acetyltransferase (GNAT) family BAMF_3624 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family BAMF_3625 PF04464 CDP-Glycerol:Poly(glycerophosphate) glycerophosphotransferase BAMF_3626 PF00535 Glycosyl transferase family 2 BAMF_3627 PF09671 Spore coat protein (Spore_GerQ) BAMF_3628 PF04241 Protein of unknown function (DUF423) BAMF_3629 PF00860 Permease family BAMF_3630 PF17261 Family of unknown function (DUF5327) BAMF_3631 PF03167 Uracil DNA glycosylase superfamily BAMF_3632 PF00535 Glycosyl transferase family 2 BAMF_3634 PF08543 Phosphomethylpyrimidine kinase BAMF_3636 PF08244 Glycosyl hydrolases family 32 C terminal BAMF_3636 PF00251 Glycosyl hydrolases family 32 N-terminal domain BAMF_3637 PF02378 Phosphotransferase system, EIIC BAMF_3637 PF00367 phosphotransferase system, EIIB BAMF_3638 PF00874 PRD domain BAMF_3638 PF03123 CAT RNA binding domain BAMF_3640 PF05922 Peptidase inhibitor I9 BAMF_3640 PF02225 PA domain BAMF_3640 PF00082 Subtilase family BAMF_3640 PF13860 FlgD Ig-like domain BAMF_3641 PF00296 Luciferase-like monooxygenase BAMF_3642 PF08279 HTH domain BAMF_3642 PF13280 WYL domain BAMF_3646 PF00881 Nitroreductase family BAMF_3647 PF01098 Cell cycle protein BAMF_3648 PF00583 Acetyltransferase (GNAT) family BAMF_3649 PF17368 Spore morphogenesis and germination YwcE BAMF_3650 PF03626 Prokaryotic Cytochrome C oxidase subunit IV BAMF_3651 PF00510 Cytochrome c oxidase subunit III BAMF_3652 PF00115 Cytochrome C and Quinol oxidase polypeptide I BAMF_3653 PF02790 Cytochrome C oxidase subunit II, transmembrane domain BAMF_3653 PF00116 Cytochrome C oxidase subunit II, periplasmic domain BAMF_3654 PF04226 Transglycosylase associated protein BAMF_3655 PF01087 Galactose-1-phosphate uridyl transferase, N-terminal domain BAMF_3655 PF02744 Galactose-1-phosphate uridyl transferase, C-terminal domain BAMF_3656 PF08544 GHMP kinases C terminal BAMF_3656 PF10509 Galactokinase galactose-binding signature BAMF_3656 PF00288 GHMP kinases N terminal domain BAMF_3657 PF04138 GtrA-like protein BAMF_3658 PF00440 Bacterial regulatory proteins, tetR family BAMF_3659 PF08671 Anti-repressor SinI BAMF_3662 PF01323 DSBA-like thioredoxin domain BAMF_3663 PF04261 Dyp-type peroxidase family BAMF_3663 PF10518 TAT (twin-arginine translocation) pathway signal sequence BAMF_3664 PF09375 Imelysin BAMF_3665 PF03239 Iron permease FTR1 family BAMF_3666 PF02581 Thiamine monophosphate synthase BAMF_3667 PF02110 Hydroxyethylthiazole kinase family BAMF_3668 PF03466 LysR substrate binding domain BAMF_3668 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family BAMF_3669 PF03788 LrgA family BAMF_3670 PF04172 LrgB-like family BAMF_3671 PF09962 Uncharacterized conserved protein (DUF2196) BAMF_3672 PF13411 MerR HTH family regulatory protein BAMF_3672 PF07739 TipAS antibiotic-recognition domain BAMF_3673 PF10026 Predicted Zn-dependent protease (DUF2268) BAMF_3674 PF17785 PUA-like domain BAMF_3674 PF10672 S-adenosylmethionine-dependent methyltransferase BAMF_3675 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily BAMF_3676 PF02378 Phosphotransferase system, EIIC BAMF_3677 PF00082 Subtilase family BAMF_3678 PF01501 Glycosyl transferase family 8 BAMF_3679 PF04607 Region found in RelA / SpoT proteins BAMF_3680 PF01040 UbiA prenyltransferase family BAMF_3681 PF12459 D-Ala-teichoic acid biosynthesis protein BAMF_3682 PF13193 AMP-binding enzyme C-terminal domain BAMF_3682 PF00501 AMP-binding enzyme BAMF_3683 PF03062 MBOAT, membrane-bound O-acyltransferase family BAMF_3684 PF00550 Phosphopantetheine attachment site BAMF_3685 PF04914 DltD protein BAMF_3686 PF01063 Amino-transferase class IV BAMF_3687 PF02056 Family 4 glycosyl hydrolase BAMF_3687 PF11975 Family 4 glycosyl hydrolase C-terminal domain BAMF_3688 PF02255 PTS system, Lactose/Cellobiose specific IIA subunit BAMF_3689 PF02378 Phosphotransferase system, EIIC BAMF_3690 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit BAMF_3691 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 BAMF_3691 PF08279 HTH domain BAMF_3691 PF00874 PRD domain BAMF_3691 PF05043 Mga helix-turn-helix domain BAMF_3693 PF02245 Methylpurine-DNA glycosylase (MPG) BAMF_3694 PF01032 FecCD transport family BAMF_3695 PF01032 FecCD transport family BAMF_3697 PF01022 Bacterial regulatory protein, arsR family BAMF_3698 PF02040 Arsenical pump membrane protein BAMF_3699 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit BAMF_3700 PF02255 PTS system, Lactose/Cellobiose specific IIA subunit BAMF_3701 PF02378 Phosphotransferase system, EIIC BAMF_3702 PF00232 Glycosyl hydrolase family 1 BAMF_3703 PF00480 ROK family BAMF_3704 PF01238 Phosphomannose isomerase type I BAMF_3705 PF02156 Glycosyl hydrolase family 26 BAMF_3706 PF00199 Catalase BAMF_3706 PF06628 Catalase-related immune-responsive BAMF_3707 PF02275 Linear amide C-N hydrolases, choloylglycine hydrolase family BAMF_3708 PF02133 Permease for cytosine/purines, uracil, thiamine, allantoin BAMF_3709 PF01256 Carbohydrate kinase BAMF_3710 PF00664 ABC transporter transmembrane region BAMF_3710 PF00005 ABC transporter BAMF_3711 PF00005 ABC transporter BAMF_3711 PF00664 ABC transporter transmembrane region BAMF_3712 PF02322 Cytochrome bd terminal oxidase subunit II BAMF_3713 PF01654 Cytochrome bd terminal oxidase subunit I BAMF_3714 PF03390 2-hydroxycarboxylate transporter family BAMF_3715 PF01522 Polysaccharide deacetylase BAMF_3716 PF17912 MalK OB fold domain BAMF_3716 PF03459 TOBE domain BAMF_3716 PF00005 ABC transporter BAMF_3717 PF13556 PucR C-terminal helix-turn-helix domain BAMF_3718 PF02588 Uncharacterised 5xTM membrane BCR, YitT family COG1284 BAMF_3718 PF10035 Uncharacterized protein conserved in bacteria (DUF2179) BAMF_3719 PF11611 Domain of unknown function (DUF4352) BAMF_3720 PF16363 GDP-mannose 4,6 dehydratase BAMF_3721 PF01546 Peptidase family M20/M25/M40 BAMF_3721 PF07687 Peptidase dimerisation domain BAMF_3723 PF04525 LURP-one-related BAMF_3724 PF01717 Cobalamin-independent synthase, Catalytic domain BAMF_3725 PF08241 Methyltransferase domain BAMF_3726 PF07662 Na+ dependent nucleoside transporter C-terminus BAMF_3726 PF01773 Na+ dependent nucleoside transporter N-terminus BAMF_3730 PF00199 Catalase BAMF_3730 PF06628 Catalase-related immune-responsive BAMF_3730 PF18011 C-terminal domain found in long catalases BAMF_3731 PF03600 Citrate transporter BAMF_3732 PF00722 Glycosyl hydrolases family 16 BAMF_3733 PF00874 PRD domain BAMF_3733 PF03123 CAT RNA binding domain BAMF_3734 PF11700 Vacuole effluxer Atg22 like BAMF_3735 PF03880 DbpA RNA binding domain BAMF_3735 PF00271 Helicase conserved C-terminal domain BAMF_3735 PF00270 DEAD/DEAH box helicase BAMF_3738 PF14176 YxiJ-like protein BAMF_3745 PF00544 Pectate lyase BAMF_3746 PF00892 EamA-like transporter family BAMF_3747 PF00582 Universal stress protein family BAMF_3748 PF00232 Glycosyl hydrolase family 1 BAMF_3749 PF02378 Phosphotransferase system, EIIC BAMF_3749 PF00367 phosphotransferase system, EIIB BAMF_3749 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 BAMF_3751 PF00145 C-5 cytosine-specific DNA methylase BAMF_3752 PF08676 MutL C terminal dimerisation domain BAMF_3752 PF01119 DNA mismatch repair protein, C-terminal domain BAMF_3756 PF04616 Glycosyl hydrolases family 43 BAMF_3756 PF16369 C-terminal lipocalin-like domain BAMF_3757 PF09021 HutP BAMF_3758 PF00221 Aromatic amino acid lyase BAMF_3759 PF01175 Urocanase Rossmann-like domain BAMF_3759 PF17392 Urocanase C-terminal domain BAMF_3759 PF17391 Urocanase N-terminal domain BAMF_3760 PF01979 Amidohydrolase family BAMF_3761 PF00491 Arginase family BAMF_3762 PF00324 Amino acid permease BAMF_3763 PF07831 Pyrimidine nucleoside phosphorylase C-terminal domain BAMF_3763 PF02885 Glycosyl transferase family, helical bundle domain BAMF_3763 PF00591 Glycosyl transferase family, a/b domain BAMF_3764 PF01773 Na+ dependent nucleoside transporter N-terminus BAMF_3764 PF07662 Na+ dependent nucleoside transporter C-terminus BAMF_3765 PF01791 DeoC/LacD family aldolase BAMF_3766 PF04198 Putative sugar-binding domain BAMF_3769 PF11631 Protein of unknown function (DUF3255) BAMF_3773 PF01497 Periplasmic binding protein BAMF_3774 PF06486 Protein of unknown function (DUF1093) BAMF_3775 PF02687 FtsX-like permease family BAMF_3776 PF00005 ABC transporter BAMF_3777 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BAMF_3778 PF00486 Transcriptional regulatory protein, C terminal BAMF_3778 PF00072 Response regulator receiver domain BAMF_3779 PF01116 Fructose-bisphosphate aldolase class-II BAMF_3780 PF01261 Xylose isomerase-like TIM barrel BAMF_3781 PF01261 Xylose isomerase-like TIM barrel BAMF_3782 PF02894 Oxidoreductase family, C-terminal alpha/beta domain BAMF_3782 PF01408 Oxidoreductase family, NAD-binding Rossmann fold BAMF_3783 PF07690 Major Facilitator Superfamily BAMF_3784 PF01261 Xylose isomerase-like TIM barrel BAMF_3785 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain BAMF_3785 PF00205 Thiamine pyrophosphate enzyme, central domain BAMF_3785 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain BAMF_3786 PF00294 pfkB family carbohydrate kinase BAMF_3787 PF04962 KduI/IolB family BAMF_3788 PF00171 Aldehyde dehydrogenase family BAMF_3789 PF08220 DeoR-like helix-turn-helix domain BAMF_3789 PF00455 DeoR C terminal sensor domain BAMF_3790 PF00248 Aldo/keto reductase family BAMF_3791 PF00083 Sugar (and other) transporter BAMF_3792 PF00183 Hsp90 protein BAMF_3792 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BAMF_3794 PF00072 Response regulator receiver domain BAMF_3794 PF00196 Bacterial regulatory proteins, luxR family BAMF_3795 PF07730 Histidine kinase BAMF_3796 PF00487 Fatty acid desaturase BAMF_3797 PF00440 Bacterial regulatory proteins, tetR family BAMF_3798 PF00171 Aldehyde dehydrogenase family BAMF_3799 PF01011 PQQ enzyme repeat BAMF_3799 PF13360 PQQ-like domain BAMF_3799 PF13570 PQQ-like domain BAMF_3802 PF07690 Major Facilitator Superfamily BAMF_3803 PF06271 RDD family BAMF_3805 PF00578 AhpC/TSA family BAMF_3806 PF13192 Thioredoxin domain BAMF_3806 PF07992 Pyridine nucleotide-disulphide oxidoreductase BAMF_3808 PF00324 Amino acid permease BAMF_3812 PF01526 Tn3 transposase DDE domain BAMF_3812 PF13700 Domain of unknown function (DUF4158) BAMF_3813 PF00239 Resolvase, N terminal domain BAMF_3813 PF02796 Helix-turn-helix domain of resolvase BAMF_3819 PF03862 SpoVAC/SpoVAEB sporulation membrane protein BAMF_3820 PF07451 Stage V sporulation protein AD (SpoVAD) BAMF_3821 PF03862 SpoVAC/SpoVAEB sporulation membrane protein BAMF_3822 PF04239 Protein of unknown function (DUF421) BAMF_3824 PF13091 PLD-like domain BAMF_3824 PF13396 Phospholipase_D-nuclease N-terminal BAMF_3825 PF06874 Firmicute fructose-1,6-bisphosphatase BAMF_3826 PF00111 2Fe-2S iron-sulfur cluster binding domain BAMF_3826 PF01799 [2Fe-2S] binding domain BAMF_3828 PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase BAMF_3828 PF01315 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain BAMF_3829 PF12804 MobA-like NTP transferase domain BAMF_3830 PF02625 XdhC and CoxI family BAMF_3830 PF13478 XdhC Rossmann domain BAMF_3833 PF00580 UvrD/REP helicase N-terminal domain BAMF_3833 PF13361 UvrD-like helicase C-terminal domain BAMF_3835 PF02590 Predicted SPOUT methyltransferase BAMF_3836 PF14116 YyzF-like protein BAMF_3840 PF00248 Aldo/keto reductase family BAMF_3841 PF00583 Acetyltransferase (GNAT) family BAMF_3842 PF18801 response regulator aspartate phosphatase H, N terminal BAMF_3843 PF00491 Arginase family BAMF_3844 PF00324 Amino acid permease BAMF_3845 PF00202 Aminotransferase class-III BAMF_3846 PF13630 SdpI/YhfL protein family BAMF_3846 PF07853 Protein of unknown function (DUF1648) BAMF_3847 PF01022 Bacterial regulatory protein, arsR family BAMF_3848 PF02954 Bacterial regulatory protein, Fis family BAMF_3848 PF13426 PAS domain BAMF_3848 PF00158 Sigma-54 interaction domain BAMF_3851 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BAMF_3851 PF00512 His Kinase A (phospho-acceptor) domain BAMF_3851 PF00672 HAMP domain BAMF_3852 PF00072 Response regulator receiver domain BAMF_3852 PF00486 Transcriptional regulatory protein, C terminal BAMF_3854 PF13180 PDZ domain BAMF_3855 PF00753 Metallo-beta-lactamase superfamily BAMF_3856 PF09648 YycH protein BAMF_3857 PF07435 YycH protein BAMF_3858 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BAMF_3858 PF00512 His Kinase A (phospho-acceptor) domain BAMF_3858 PF13426 PAS domain BAMF_3858 PF00672 HAMP domain BAMF_3859 PF00486 Transcriptional regulatory protein, C terminal BAMF_3859 PF00072 Response regulator receiver domain BAMF_3860 PF00709 Adenylosuccinate synthetase BAMF_3861 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily BAMF_3862 PF00772 DnaB-like helicase N terminal domain BAMF_3862 PF03796 DnaB-like helicase C terminal domain BAMF_3863 PF09954 Uncharacterized protein conserved in bacteria (DUF2188) BAMF_3865 PF14174 YycC-like protein BAMF_3868 PF02222 ATP-grasp domain BAMF_3869 PF00534 Glycosyl transferases group 1 BAMF_3869 PF13439 Glycosyltransferase Family 4 BAMF_3872 PF03948 Ribosomal protein L9, C-terminal domain BAMF_3872 PF01281 Ribosomal protein L9, N-terminal domain BAMF_3873 PF02272 DHHA1 domain BAMF_3873 PF01368 DHH family BAMF_3874 PF09991 Predicted membrane protein (DUF2232) BAMF_3876 PF07875 Coat F domain BAMF_3877 PF01638 HxlR-like helix-turn-helix BAMF_3878 PF02833 DHHA2 domain BAMF_3878 PF01368 DHH family BAMF_3879 PF00892 EamA-like transporter family BAMF_3880 PF02435 Levansucrase/Invertase BAMF_3881 PF08244 Glycosyl hydrolases family 32 C terminal BAMF_3881 PF00251 Glycosyl hydrolases family 32 N-terminal domain BAMF_3882 PF00392 Bacterial regulatory proteins, gntR family BAMF_3882 PF07729 FCD domain BAMF_3883 PF05163 DinB family BAMF_3884 PF07690 Major Facilitator Superfamily BAMF_3886 PF00881 Nitroreductase family BAMF_3887 PF01047 MarR family BAMF_3888 PF02588 Uncharacterised 5xTM membrane BCR, YitT family COG1284 BAMF_3888 PF10035 Uncharacterized protein conserved in bacteria (DUF2179) BAMF_3889 PF01047 MarR family BAMF_3890 PF13673 Acetyltransferase (GNAT) domain BAMF_3891 PF00561 alpha/beta hydrolase fold BAMF_3894 PF03190 Protein of unknown function, DUF255 BAMF_3895 PF03190 Protein of unknown function, DUF255 BAMF_3896 PF02517 CPBP intramembrane metalloprotease BAMF_3897 PF00083 Sugar (and other) transporter BAMF_3898 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily BAMF_3899 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family BAMF_3899 PF00356 Bacterial regulatory proteins, lacI family BAMF_3900 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family BAMF_3900 PF00356 Bacterial regulatory proteins, lacI family BAMF_3901 PF03372 Endonuclease/Exonuclease/phosphatase family BAMF_3902 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain BAMF_3902 PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain BAMF_3903 PF12833 Helix-turn-helix domain BAMF_3903 PF02805 Metal binding domain of Ada BAMF_3904 PF01084 Ribosomal protein S18 BAMF_3905 PF00436 Single-strand binding protein family BAMF_3906 PF01250 Ribosomal protein S6 BAMF_3907 PF01926 50S ribosome-binding GTPase BAMF_3907 PF06071 Protein of unknown function (DUF933) BAMF_3908 PF04879 Molybdopterin oxidoreductase Fe4S4 domain BAMF_3908 PF01568 Molydopterin dinucleotide binding domain BAMF_3908 PF00384 Molybdopterin oxidoreductase BAMF_3909 PF06107 Bacterial protein of unknown function (DUF951) BAMF_3912 PF06866 Protein of unknown function (DUF1256) BAMF_3913 PF17762 HTH domain found in ParB protein BAMF_3913 PF02195 ParB-like nuclease domain BAMF_3914 PF13614 AAA domain BAMF_3915 PF17762 HTH domain found in ParB protein BAMF_3915 PF02195 ParB-like nuclease domain BAMF_3916 PF02527 rRNA small subunit methyltransferase G BAMF_3917 PF01134 Glucose inhibited division protein A BAMF_3917 PF13932 GidA associated domain BAMF_3918 PF12631 MnmE helical domain BAMF_3918 PF10396 GTP-binding protein TrmE N-terminus BAMF_3918 PF01926 50S ribosome-binding GTPase BAMF_3919 PF01424 R3H domain BAMF_3919 PF14804 Jag N-terminus BAMF_3920 PF02096 60Kd inner membrane protein BAMF_3921 PF00825 Ribonuclease P BAMF_3922 PF00468 Ribosomal protein L34